Sequence Length K Count R Count Modifications Modified sequence Oxidation (M) Probabilities Oxidation (M) Score Diffs Acetyl (Protein N-term) Oxidation (M) Missed cleavages Proteins Leading proteins Leading razor protein Gene names Protein names Type Labeling State Raw file Experiment MS/MS m/z Charge m/z Mass Resolution Uncalibrated - Calibrated m/z [ppm] Uncalibrated - Calibrated m/z [Da] Mass error [ppm] Mass error [Da] Uncalibrated mass error [ppm] Uncalibrated mass error [Da] Max intensity m/z 0 Max intensity m/z 1 Retention time Retention length Calibrated retention time Calibrated retention time start Calibrated retention time finish Retention time calibration Match time difference Match m/z difference Match q-value Match score Number of data points Number of scans Number of isotopic peaks PIF Fraction of total spectrum Base peak fraction PEP MS/MS count MS/MS scan number Score Delta score Combinatorics Ratio H/L Ratio H/L normalized Ratio H/L shift Intensity Intensity L Intensity H Reverse Potential contaminant id Protein group IDs Peptide ID Mod. peptide ID MS/MS IDs Best MS/MS AIF MS/MS IDs Oxidation (M) site IDs AAAAAAAAAPAAAATAPTTAATTAATAAQ 29 0 0 Unmodified _AAAAAAAAAPAAAATAPTTAATTAATAAQ_ 0 0 0 P37108;H0YLW0 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1184.6067 2 1184.60878 2367.20302 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.238 1 88.238 87.738 88.738 0 0 0 0 3.9029E-06 1 53198 53.995 46.793 1 0 1549 0 0 0 0 AAAAAAAAAVSR 12 0 1 Unmodified _AAAAAAAAAVSR_ 0 0 0 A0A0A6YYC7;A0A024R4Z4;A0A024R4Z1;Q96JP5 A0A0A6YYC7 A0A0A6YYC7 ZFP91-CNTF;hCG_2042749;ZFP91 E3 ubiquitin-protein ligase ZFP91 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.7853 2 500.780348 999.546142 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.269 1 26.269 25.769 26.769 0 0 0 0 0.0017288 1 11729 69.275 47.748 1 1 166 1 1 1 1 AAAAAAALQAK 11 1 0 Unmodified _AAAAAAALQAK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;H3BU31 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.7796 2 478.779816 955.545079 87177.83 0.016047 7.6829E-06 -0.048537 -2.3238E-05 -0.03249 -1.5555E-05 478.779877171255 482.786800784851 27.511 0.71964 27.511 27.295 28.015 0 256 45 10 0 0 0 2.8462E-12 2 12655 173.68 129.82 1 0.92616 1.1026 0 629500000 334560000 294940000 2 1548 2 2 2;3 3 AAAAAAALQAK 11 1 0 Unmodified _AAAAAAALQAK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;H3BU31 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 964.4489 1 956.552356 955.545079 62224.61 0.49911 0.00047742 0.28674 0.00027428 0.78585 0.00075171 956.552380437774 964.56674312404 27.044 0.43302 27.044 26.926 27.359 0 103 21 8 0 0 0 0.00026805 1 12334 95.909 72.89 1 1.0199 1.1394 0 88956000 43720000 45236000 3 1548 2 2 4 4 AAAAAAALQAK 11 1 0 Unmodified _AAAAAAALQAK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;H3BU31 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.7871 2 478.779816 955.545079 87505.8 0.17599 8.426E-05 -0.054147 -2.5925E-05 0.12184 5.8335E-05 478.780006242984 482.786698525403 27.079 0.702 27.079 26.822 27.524 0 194 34 10 0 0 0 1.8704E-12 2 12345 143.12 110.01 1 0.88393 1.0418 0 622460000 323880000 298590000 4 1548 2 2 5;6 5 AAAAAAALQAK 11 1 0 Unmodified _AAAAAAALQAK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;H3BU31 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 482.7866 2 478.779816 955.545079 86852.09 0.064103 3.0691E-05 -0.19651 -9.4084E-05 -0.13241 -6.3393E-05 478.779861126321 482.786614049571 30.722 0.77396 30.722 30.458 31.232 0 258 48 8 0 0 0 0.00016538 2 12719 94.302 78.1 1 1.0567 0.89428 0 58666000 28673000 29993000 5 1548 2 2 7;8 7 AAAAAAALQAK 11 1 0 Unmodified _AAAAAAALQAK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;H3BU31 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.7872 2 478.779816 955.545079 87941.25 0.11994 5.7427E-05 -0.052981 -2.5366E-05 0.066964 3.2061E-05 478.779960396622 482.786710300352 30.767 0.84946 30.767 30.472 31.322 1.9073E-06 231 45 9 0 0 0 1.8338E-05 2 12242 105.57 87.659 1 1.0702 0.9008 0 52120000 25769000 26351000 6 1548 2 2 9;10 9 AAAAAAAPSGGGGGGEEERLEEK 23 1 1 Acetyl (Protein N-term) _(ac)AAAAAAAPSGGGGGGEEERLEEK_ 1 0 1 A0A140VKC4;B5MCB4 A0A140VKC4 A0A140VKC4 MECP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1064.4994 2 1064.00108 2125.9876 60494.69 0.58694 0.0006245 -0.42612 -0.0004534 0.16081 0.00017111 1064.00054452664 1073.01216564449 50.646 0.29002 50.646 50.515 50.806 0 81 27 5 0 0 0 1.4821E-05 1 27916 46.069 46.069 1 0.32486 0.35715 0 17679000 11376000 6302900 7 623 3 3 11 11 AAAAAAAPSGGGGGGEEERLEEK 23 1 1 Acetyl (Protein N-term) _(ac)AAAAAAAPSGGGGGGEEERLEEK_ 1 0 1 A0A140VKC4;B5MCB4 A0A140VKC4 A0A140VKC4 MECP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1073.5148 2 1064.00108 2125.9876 64044.9 0.27696 0.00029468 -0.16811 -0.00017887 0.10884 0.00011581 1064.00076628667 1073.51434111979 49.546 0.29489 49.546 49.418 49.712 0 62 22 7 0 0 0 6.6607E-08 2 27895 59.185 56.318 1 0.46361 0.51783 0 11600000 6894500 4705300 8 623 3 3 12;13 13 AAAAAATAPPSPGPAQPGPR 20 0 1 Unmodified _AAAAAATAPPSPGPAQPGPR_ 0 0 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.4654 2 878.460467 1754.90638 66281.39 0.63441 0.0005573 -0.24406 -0.0002144 0.39035 0.00034291 878.460018912923 883.965823158834 40.63 0.40723 40.63 40.418 40.826 0 167 36 6 0 0 0 8.1112E-08 1 21179 86.772 86.772 1 0.72082 0.74593 0 23258000 11685000 11574000 9 1861 4 4 14 14 AAAAAATAPPSPGPAQPGPR 20 0 1 Unmodified _AAAAAATAPPSPGPAQPGPR_ 0 0 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.9636 2 878.460467 1754.90638 65425.7 0.85836 0.00075404 0.077795 6.8339E-05 0.93616 0.00082238 878.460201437443 883.46465122922 39.679 0.39481 39.679 39.519 39.914 0 151 32 6 0 0 0 8.6653E-24 2 21092 134.99 134.99 1 0.86786 0.94635 0 29578000 17466000 12112000 10 1861 4 4 15;16 16 AAAAAATAPPSPGPAQPGPR 20 0 1 Unmodified _AAAAAATAPPSPGPAQPGPR_ 0 0 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 883.466 2 878.460467 1754.90638 65744.53 -0.086334 -7.5841E-05 0.52562 0.00046174 0.43929 0.0003859 878.460846660409 883.465090600229 47.255 0.59325 47.255 46.982 47.576 3.8147E-06 298 46 8 0 0 0 0.00183 1 22213 34.183 34.183 1 1.4317 1.1898 0 7619800 3128600 4491200 11 1861 4 4 17 17 AAAAPFQTSQASASAPR 17 0 1 Unmodified _AAAAPFQTSQASASAPR_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.4084 2 816.410443 1630.80633 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.674 1 46.674 46.174 47.174 3.8147E-06 0 0 0 0.00052252 1 25252 61.11 37.259 1 12 1977 5 5 18 18 AAAAPFQTSQASASAPR 17 0 1 Unmodified _AAAAPFQTSQASASAPR_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.9141 2 816.410443 1630.80633 NaN NaN NaN -0.99914 -0.00081571 NaN NaN NaN NaN 45.645 0.28539 45.645 45.492 45.777 0 0 0 0 1.2205E-08 1 25091 93.011 78.853 1 NaN NaN 0 4818600 4818600 0 13 1977 5 5 19 19 AAAASAAEAGIATTGTEDSDDALLK 25 1 0 Unmodified _AAAASAAEAGIATTGTEDSDDALLK_ 0 0 0 P55036;H0Y3Y9 P55036 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1164.5696 2 1160.56117 2319.10778 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.398 1 86.398 85.898 86.898 0 0 0 0 0.00053163 1 52017 45.723 40.444 1 14 1612 6 6 20 20 AAADGGGPGGASVGTEEDGGGVGHR 25 0 1 Acetyl (Protein N-term) _(ac)AAADGGGPGGASVGTEEDGGGVGHR_ 1 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1095.9921 2 1090.48358 2178.95262 60130.77 0.33936 0.00037007 0.23716 0.00025862 0.57652 0.00062869 1090.48373101136 1095.48808942954 42.669 0.45733 42.669 42.503 42.961 0 167 38 6 0 0 0 1.5663E-16 3 22687 99.055 99.055 1 0.93989 0.97357 0 13753000 6520900 7232200 15 684 7 7 21;22;23 21 AAADGGGPGGASVGTEEDGGGVGHR 25 0 1 Acetyl (Protein N-term) _(ac)AAADGGGPGGASVGTEEDGGGVGHR_ 1 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1095.9897 2 1090.48358 2178.95262 59583.32 0.14111 0.00015388 0.14149 0.00015429 0.2826 0.00030817 1090.98472617478 1095.98960329607 42.003 0.44913 42.003 41.809 42.258 0 182 42 6 0 0 0 3.8902E-27 3 22590 118.47 118.47 1 1.0436 1.0647 0 20689000 11059000 9629900 16 684 7 7 24;25;26 26 AAADTLQGPMQAAYR 15 0 1 Oxidation (M) _AAADTLQGPM(ox)QAAYR_ AAADTLQGPM(1)QAAYR AAADTLQGPM(60.17)QAAYR 0 1 0 Q6P2E9;I3L2F4 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.8833 2 790.380297 1578.74604 NaN NaN NaN -1.6366 -0.0012935 NaN NaN NaN NaN 44.08 0.26447 44.08 43.964 44.228 0 0 0 0 0.0010895 1 24034 60.167 46.814 1 NaN NaN 0 3437000 0 3437000 17 1853 8 8 27 27 1703 AAAEALSFTK 10 1 0 Unmodified _AAAEALSFTK_ 0 0 0 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.7784 2 504.771657 1007.52876 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.234 1 53.234 52.734 53.734 0 0 0 0 0.0045944 1 29742 64.654 35.277 1 18 1984 9 9 28 28 AAAEALSFTK 10 1 0 Unmodified _AAAEALSFTK_ 0 0 0 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.779 2 504.771657 1007.52876 88739.48 0.31589 0.00015945 -0.34717 -0.00017524 -0.031277 -1.5787E-05 504.771678278312 508.778855736308 51.924 0.54049 51.924 51.721 52.262 0 84 41 4 0 0 0 0.016025 2 29418 48.423 32.221 1 1.5797 1.6382 0 11260000 3392500 7867000 19 1984 9 9 29;30 29 AAAEELQEAAGAGDGATENGVQPPK 25 1 0 Unmodified _AAAEELQEAAGAGDGATENGVQPPK_ 0 0 0 Q9H9Y2;X6R7Q1 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1191.5664 2 1191.06441 2380.11426 56667.56 -0.13262 -0.00015796 0.26057 0.00031036 0.12795 0.0001524 1191.56642767032 1195.07155751954 68.5 0.57101 68.5 68.208 68.78 0 223 49 7 0 0 0 6.1428E-09 2 39547 54.281 54.281 1 1.0621 1.0848 0 14290000 6351400 7938500 20 2048 10 10 31;32 32 AAAEELQEAAGAGDGATENGVQPPK 25 1 0 Unmodified _AAAEELQEAAGAGDGATENGVQPPK_ 0 0 0 Q9H9Y2;X6R7Q1 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1195.0717 2 1191.06441 2380.11426 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.277 1 68.277 67.777 68.777 0 0 0 0 0.0031754 1 39557 42.813 22.432 1 21 2048 10 10 33 33 AAAEELQEAAGAGDGATENGVQPPK 25 1 0 Unmodified _AAAEELQEAAGAGDGATENGVQPPK_ 0 0 0 Q9H9Y2;X6R7Q1 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1191.5636 2 1191.06441 2380.11426 56411.63 -0.19789 -0.00023571 0.27697 0.00032989 0.079073 9.4182E-05 1191.56628017054 1195.57351778937 67.564 0.52527 67.564 67.251 67.776 0 174 41 7 0 0 0 6.1122E-16 3 39908 93.51 93.51 1 1.1497 1.1749 0 17323000 7886400 9436600 22 2048 10 10 34;35;36 35 AAAEELQEAAGAGDGATENGVQPPK 25 1 0 Unmodified _AAAEELQEAAGAGDGATENGVQPPK_ 0 0 0 Q9H9Y2;X6R7Q1 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1191.5651 2 1191.06441 2380.11426 55352.02 0.06088 7.2512E-05 -0.42231 -0.00050299 -0.36143 -0.00043048 1191.56457740806 1195.57240557032 79.369 0.7963 79.369 78.898 79.694 0 272 47 8 0 0 0 1.1692E-05 1 41900 42.913 42.913 1 0.90873 0.74588 0 5191900 3289800 1902100 23 2048 10 10 37 37 AAAEQAISVR 10 0 1 Unmodified _AAAEQAISVR_ 0 0 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.2802 2 508.28018 1014.54581 84247.52 0.41967 0.00021331 -0.26881 -0.00013663 0.15086 7.6678E-05 508.280143581841 513.284087699844 31.421 0.28955 31.421 31.276 31.566 0 87 24 5 0 0 0 1.4673E-05 1 15519 101.72 45.175 1 0.90647 0.99522 0 40390000 24623000 15767000 24 1676 11 11 38 38 AAAFPPGFSISEIK 14 1 0 Unmodified _AAAFPPGFSISEIK_ 0 0 0 Q9H9Y2;X6R7Q1 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.8845 2 717.88501 1433.75547 73213.59 1.1507 0.00082608 -0.95358 -0.00068456 0.19713 0.00014152 717.884480120437 721.891492926431 110.44 1.3502 110.44 109.86 111.21 0 418 93 8 0 0 0 0.00013109 2 69284 79.974 79.974 1 0.95053 1.0671 0 67733000 37158000 30575000 25 2048 12 12 39;40 40 AAAFPPGFSISEIK 14 1 0 Unmodified _AAAFPPGFSISEIK_ 0 0 0 Q9H9Y2;X6R7Q1 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.8915 2 717.88501 1433.75547 72159.42 0.92683 0.00066536 -0.67571 -0.00048508 0.25112 0.00018028 717.885266603451 721.891351556076 121.95 1.443 121.95 121.12 122.57 -7.6294E-06 288 71 6 0 0 0 0.007029 3 72411 41.08 41.08 1 0.88913 0.70331 0 5071000 2693700 2377300 26 2048 12 12 41;42;43 42 AAAFPPGFSISEIK 14 1 0 Unmodified _AAAFPPGFSISEIK_ 0 0 0 Q9H9Y2;X6R7Q1 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.3866 2 717.88501 1433.75547 71702.72 0.91925 0.00065992 -0.56814 -0.00040786 0.35111 0.00025206 717.885150647855 721.891199163281 121.89 1.559 121.89 120.8 122.36 7.6294E-06 299 78 6 0 0 0 0.052213 1 71902 24.853 24.853 1 0.92758 0.75659 0 6437000 2971400 3465600 27 2048 12 12 44 44 AAAGQESEGPAVGPPQPLGK 20 1 0 Unmodified _AAAGQESEGPAVGPPQPLGK_ 0 0 0 A0A0S2Q0B1;O14497 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A AT-rich interactive domain-containing protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 930.9766 2 930.976147 1859.93774 65088.06 0.51846 0.00048267 -0.11238 -0.00010462 0.40608 0.00037805 930.976149321013 934.983777687144 61.825 0.49692 61.825 61.538 62.035 0 101 39 4 0 0 0 2.2464E-07 2 35367 85.45 85.45 1 0.87743 0.86051 0 8843900 4433800 4410100 28 544 13 13 45;46 46 AAAGYPDPYSR 11 0 1 Unmodified _AAAGYPDPYSR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.2747 2 584.275095 1166.53564 79648.58 0.64615 0.00037753 0.078996 4.6155E-05 0.72514 0.00042368 584.275126606249 589.279370997473 39.374 0.54249 39.374 39.126 39.668 0 131 44 5 0 0 0 0.013755 2 20398 47.187 47.187 1 1.7485 1.8145 0 20705000 8945700 11759000 29 397;1622 14 14 47;48 47 AAAGYPDPYSR 11 0 1 Unmodified _AAAGYPDPYSR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.2797 2 584.275095 1166.53564 NaN NaN NaN 0.29336 0.00017141 NaN NaN NaN NaN 38.322 0.47957 38.322 38.09 38.57 0 0 0 0 0.035945 1 20005 48.423 34.844 1 NaN NaN 0 18464000 0 18464000 30 397;1622 14 14 49 49 AAAIGIDLGTTYSCVGVFQHGK 22 1 0 Unmodified _AAAIGIDLGTTYSCVGVFQHGK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6;B4DNV4 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.3854 3 755.715927 2264.12595 70361.16 0.55855 0.00042211 0.41989 0.00031732 0.97844 0.00073943 756.050635198611 758.721714870645 105.5 0.31162 105.5 105.38 105.69 0 76 20 5 0 0 0 0.00079543 2 67119 31.067 29.842 1 0.46648 0.51098 0 40837000 26371000 14466000 31 533 15 15 50;51 51 AAAIGIDLGTTYSCVGVFQHGK 22 1 0 Unmodified _AAAIGIDLGTTYSCVGVFQHGK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6;B4DNV4 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.0518 3 755.715927 2264.12595 69629.11 0.50331 0.00038036 0.37648 0.00028451 0.87979 0.00066487 756.050223851904 758.387960631955 117.03 0.59706 117.03 116.69 117.29 7.6294E-06 98 23 9 0 0 0 0.0013531 1 68813 26.84 23.399 1 1.1638 0.91418 0 11267000 5735800 5531000 32 533 15 15 52 52 AAAIGIDLGTTYSCVGVFQHGK 22 1 0 Unmodified _AAAIGIDLGTTYSCVGVFQHGK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6;B4DNV4 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.0508 3 755.715927 2264.12595 70219.21 0.7004 0.0005293 -0.053064 -4.0101E-05 0.64733 0.0004892 756.050017112493 758.721541813305 116.75 0.51189 116.75 116.51 117.02 7.6294E-06 98 22 8 0 0 0 2.5785E-08 1 67750 62.684 62.684 1 1.1338 0.91049 0 14900000 6701400 8198400 33 533 15 15 53 53 AAALDVYNAVSTSFQR 16 0 1 Unmodified _AAALDVYNAVSTSFQR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.9408 2 856.933751 1711.85295 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.7 1 104.7 104.2 105.2 -7.6294E-06 0 0 0 0.00077893 1 64728 73.848 62.315 1 34 1984 16 16 54 54 AAALDVYNAVSTSFQR 16 0 1 Unmodified _AAALDVYNAVSTSFQR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.9399 2 856.933751 1711.85295 NaN NaN NaN 0.80398 0.00068896 NaN NaN NaN NaN 103.96 0.34787 103.96 103.88 104.23 7.6294E-06 0 0 0 0.00011625 1 65867 75.479 64.266 1 NaN NaN 0 5541900 0 5541900 35 1984 16 16 55 55 AAALDVYNAVSTSFQR 16 0 1 Unmodified _AAALDVYNAVSTSFQR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 861.9388 2 856.933751 1711.85295 NaN NaN NaN 0.55507 0.00047566 NaN NaN NaN NaN 116.1 0.3665 116.1 115.92 116.28 0 0 0 0 0.0081636 1 67287 50.222 44.377 1 NaN NaN 0 3972900 0 3972900 36 1984 16 16 56 56 AAALVLQTIWGYK 13 1 0 Unmodified _AAALVLQTIWGYK_ 0 0 0 Q7KZJ3;A0A024R4Z0;Q96FS1;Q68DU0;C9JZR2;O60716;A0A024R4Y7 Q7KZJ3 Q7KZJ3 CTNND1;DKFZp781O2021 Catenin delta-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.4186 2 717.411195 1432.80784 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.37 1 118.37 117.87 118.87 0 0 0 0 0.0036679 1 77832 63.184 45.375 1 37 165 17 17 57 57 AAAPAPEEEMDECEQALAAEPK 22 1 0 Oxidation (M) _AAAPAPEEEM(ox)DECEQALAAEPK_ AAAPAPEEEM(1)DECEQALAAEPK AAAPAPEEEM(72.32)DECEQALAAEPK 0 1 0 Q53YD7;P26641;Q2F840 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1191.0226 2 1187.01468 2372.01481 57967.83 -0.093273 -0.00011072 0.15039 0.00017852 0.057119 6.7801E-05 1187.01513093277 1192.02416232372 63.569 0.41544 63.569 63.317 63.732 0 84 40 5 0 0 0 1.4593E-08 3 36432 72.321 67.607 1 3.0566 3.038 0 8074900 3015600 5059300 38 1522 18 18 58;59;60 59 1287 AAAPAPEEEMDECEQALAAEPK 22 1 0 Oxidation (M) _AAAPAPEEEM(ox)DECEQALAAEPK_ AAAPAPEEEM(1)DECEQALAAEPK AAAPAPEEEM(90.71)DECEQALAAEPK 0 1 0 Q53YD7;P26641;Q2F840 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1191.5243 2 1187.01468 2372.01481 57369.4 0.11973 0.00014212 0.34871 0.00041392 0.46844 0.00055604 1187.01538742999 1192.02454222716 64.153 0.43929 64.153 63.968 64.408 0 99 35 6 0 0 0 1.624E-11 2 36890 90.707 85.993 1 5.0488 5.1974 0 10784000 2302500 8481800 39 1522 18 18 61;62 61 1287 AAAPAPEEEMDECEQALAAEPK 22 1 0 Oxidation (M) _AAAPAPEEEM(ox)DECEQALAAEPK_ AAAPAPEEEM(1)DECEQALAAEPK AAAPAPEEEM(98.94)DECEQALAAEPK 0 1 0 Q53YD7;P26641;Q2F840 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1191.5236 2 1187.01468 2372.01481 NaN NaN NaN 0.099152 0.0001177 NaN NaN NaN NaN 63.102 0.5302 63.102 62.835 63.365 0 0 0 0 7.3331E-19 1 37088 98.943 94.142 1 NaN NaN 0 7400300 0 7400300 40 1522 18 18 63 63 1287 AAASHLFPFEK 11 1 0 Unmodified _AAASHLFPFEK_ 0 0 0 A0A024R2M8 A0A024R2M8 A0A024R2M8 XPC MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 406.5489 3 406.548629 1216.62406 93481.45 0.22808 9.2724E-05 0.078181 3.1784E-05 0.30626 0.00012451 406.548681755246 409.219988529787 71.829 0.91541 71.829 71.378 72.293 7.6294E-06 331 75 6 0 0 0 0.034988 1 41852 21.23 12.5 1 0.50135 0.52988 0 31075000 19795000 11280000 41 118 19 19 64 64 AAASHLFPFEK 11 1 0 Unmodified _AAASHLFPFEK_ 0 0 0 A0A024R2M8 A0A024R2M8 A0A024R2M8 XPC MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 406.5482 3 406.548629 1216.62406 95188.25 0.098344 3.9982E-05 0.2225 9.0456E-05 0.32084 0.00013044 406.548644235659 409.21994761083 68.94 0.8211 68.94 68.748 69.569 0 211 69 6 0 0 0 0.02256 1 40919 24.071 16.809 1 0.66514 0.67343 0 26592000 17451000 9140500 42 118 19 19 65 65 AAAVLPVLDLAQR 13 0 1 Unmodified _AAAVLPVLDLAQR_ 0 0 0 Q9UEH5;Q6IPW4;Q6IB76;A8K750;E7EPT4;P19404 Q9UEH5 Q9UEH5 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.9046 2 668.900994 1335.78744 78036.15 0.79193 0.00052972 -0.23256 -0.00015556 0.55937 0.00037416 669.401588028845 674.406628428243 114.24 0.3843 114.24 114.07 114.45 0 72 26 4 0 0 0 0.015726 1 74381 36.684 31.778 1 1.8301 1.9338 0 3917800 1241400 2676500 43 766 20 20 66 66 AAAYSAQVQPVDGATR 16 0 1 Unmodified _AAAYSAQVQPVDGATR_ 0 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.9099 2 802.904993 1603.79543 68323.02 0.59684 0.0004792 0.058895 4.7287E-05 0.65573 0.00052649 803.406368585912 807.909272854315 45.91 0.43151 45.91 45.75 46.182 0 154 39 5 0 0 0 2.6724E-17 3 24734 125.36 125.36 1 0.92 0.9412 0 32404000 15752000 16652000 44 2040 21 21 67;68;69 68 AAAYSAQVQPVDGATR 16 0 1 Unmodified _AAAYSAQVQPVDGATR_ 0 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.9055 2 802.904993 1603.79543 68069.3 0.68975 0.00055381 0.11335 9.1007E-05 0.8031 0.00064481 802.90511232208 808.410715564086 44.95 0.45854 44.95 44.703 45.162 0 153 35 6 0 0 0 7.9452E-57 2 24609 182.41 182.41 1 0.8929 0.97757 0 32682000 16520000 16161000 45 2040 21 21 70;71 71 AAAYSAQVQPVDGATR 16 0 1 Unmodified _AAAYSAQVQPVDGATR_ 0 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.9103 2 802.904993 1603.79543 67511.78 0.53412 0.00042885 -0.34014 -0.0002731 0.19398 0.00015575 802.904876506481 807.909175072266 53.357 0.48809 53.357 53.136 53.624 0 177 35 6 0 0 0 0.00015634 1 26545 74.611 74.611 1 1.1085 0.9444 0 5503400 2614500 2888900 46 2040 21 21 72 72 AAAYSAQVQPVDGATR 16 0 1 Unmodified _AAAYSAQVQPVDGATR_ 0 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 802.9061 2 802.904993 1603.79543 68700.48 0.40493 0.00032512 0.17572 0.00014109 0.58065 0.0004662 802.905153801295 807.909373807996 53.883 0.50206 53.883 53.661 54.163 0 187 33 7 0 0 0 0.0012325 2 26268 46.069 46.069 1 1.0385 0.91852 0 4066000 1974200 2091900 47 2040 21 21 73;74 73 AACEQQAVALTLQEDR 16 0 1 Unmodified _AACEQQAVALTLQEDR_ 0 0 0 Q9BUH6 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.9382 2 901.938707 1801.86286 63892.93 0.36676 0.00033079 0.43901 0.00039596 0.80577 0.00072676 902.439975962245 906.943857982883 84.518 0.56377 84.518 84.263 84.827 0 123 42 5 0 0 0 0.0028798 2 46122 39.006 39.006 1 1.2353 1.0329 0 3645500 1580700 2064900 48 2005 22 22 75;76 75 AACEQQAVALTLQEDR 16 0 1 Unmodified _AACEQQAVALTLQEDR_ 0 0 0 Q9BUH6 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 902.4416 2 901.938707 1801.86286 NaN NaN NaN -0.31098 -0.00028048 NaN NaN NaN NaN 84.738 0.41193 84.738 84.523 84.935 0 0 0 0 0.014044 1 45480 43.594 37.749 1 NaN NaN 0 1584100 1584100 0 49 2005 22 22 77 77 AACIAEQYHTVLK 13 1 0 Unmodified _AACIAEQYHTVLK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.5972 3 501.925659 1502.75515 85471.7 0.49908 0.0002505 -0.27569 -0.00013838 0.22339 0.00011213 502.259951960765 504.596847126605 53.365 0.5944 53.365 52.988 53.582 0 174 46 8 0 0 0 0.01971 1 29830 26.206 14.23 1 0.6496 0.72951 0 68456000 35245000 33210000 50 1421 23 23 78 78 AACIAEQYHTVLK 13 1 0 Unmodified _AACIAEQYHTVLK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 504.5974 3 501.925659 1502.75515 84373.77 0.13214 6.6323E-05 -0.1898 -9.5263E-05 -0.057657 -2.894E-05 501.925545738907 504.59699830927 62.57 0.51114 62.57 62.357 62.868 -3.8147E-06 219 40 8 0 0 0 0.010877 1 32111 32.43 20.454 1 1.2152 0.94271 0 14112000 6073200 8038700 51 1421 23 23 79 79 AACIAEQYHTVLK 13 1 0 Unmodified _AACIAEQYHTVLK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.3859 2 752.384851 1502.75515 71577.78 0.506 0.0003807 0.024289 1.8275E-05 0.53028 0.00039898 752.384918458696 756.391929841604 62.614 0.45469 62.614 62.381 62.835 0 131 35 6 0 0 0 0.046952 1 32141 31.597 23.792 1 1.3362 1.0521 0 5743900 2905900 2838000 52 1421 23 23 80 80 AACIAEQYHTVLK 13 1 0 Unmodified _AACIAEQYHTVLK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.5969 3 501.925659 1502.75515 85052.11 0.0023284 1.1687E-06 0.060541 3.0387E-05 0.062869 3.1556E-05 501.925695149738 504.596937082819 63.034 0.58619 63.034 62.684 63.27 -3.8147E-06 213 46 6 0 0 0 0.0036636 2 31660 40.025 28.048 1 1.2223 1.0038 0 9382900 4121900 5261000 53 1421 23 23 81;82 81 AACNLLQR 8 0 1 Unmodified _AACNLLQR_ 0 0 0 Q01813;Q5VSR5;V9GYV7 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2487 2 473.250369 944.486184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.926 1 35.926 35.426 36.426 3.8147E-06 0 0 0 0.047548 1 18128 55.441 32.819 1 54 1677 24 24 83 83 AACQCVEPIK 10 1 0 Unmodified _AACQCVEPIK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.2831 2 588.281008 1174.54746 NaN NaN NaN -0.59603 -0.00035063 NaN NaN NaN NaN 29.539 0.25706 29.539 29.37 29.627 -1.9073E-06 0 0 0 9.6716E-05 1 14284 96.936 75.085 1 NaN NaN 0 13359000 13359000 0 55 1965 25 25 84 84 AACQCVEPIK 10 1 0 Unmodified _AACQCVEPIK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.2864 2 588.281008 1174.54746 86115.53 0.53217 0.00031307 -0.17493 -0.00010291 0.35725 0.00021016 588.281461877409 592.287356367498 33.424 0.20543 33.424 33.309 33.515 0 56 16 5 0 0 0 0.00069321 2 14614 82.75 73.838 1 0.50835 0.403 0 4263800 2939800 1324000 56 1965 25 25 85;86 86 AACQCVEPIK 10 1 0 Unmodified _AACQCVEPIK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.2874 2 588.281008 1174.54746 85364.02 0.40933 0.0002408 -0.59346 -0.00034912 -0.18414 -0.00010832 588.281405793466 592.287364804888 33.527 0.23431 33.527 33.415 33.649 0 59 18 5 0 0 0 0.0017916 2 14211 72.038 64.393 1 0.5527 0.4523 0 4852800 2824000 2028700 57 1965 25 25 87;88 88 AADEEAFEDNSEEYIR 16 0 1 Unmodified _AADEEAFEDNSEEYIR_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DM67 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 949.4019 2 944.397592 1886.78063 NaN NaN NaN 0.31292 0.00029552 NaN NaN NaN NaN 73.009 0.21622 73.009 72.858 73.074 -7.6294E-06 0 0 0 1.6451E-18 1 42767 125.54 117.24 1 NaN NaN 0 5616100 0 5616100 58 1037 26 26 89 89 AADEEAFEDNSEEYIR 16 0 1 Unmodified _AADEEAFEDNSEEYIR_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DM67 B4DUC5 B4DUC5 CSE1L Exportin-2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 944.3987 2 944.397592 1886.78063 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.976 1 72.976 72.476 73.476 0 0 0 0 0.00064307 1 42804 75.739 72.701 1 59 1037 26 26 90 90 AADEEAFEDNSEEYIR 16 0 1 Unmodified _AADEEAFEDNSEEYIR_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DM67 B4DUC5 B4DUC5 CSE1L Exportin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.4039 2 944.397592 1886.78063 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.916 1 71.916 71.416 72.416 -7.6294E-06 0 0 0 0.00011458 1 43156 85.522 77.611 1 60 1037 26 26 91 91 AADIIDGLR 9 0 1 Unmodified _AADIIDGLR_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.2634 2 472.263999 942.513445 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.473 1 71.473 70.973 71.973 0 0 0 0 0.035184 1 42853 51.346 28.326 1 61 1990 27 27 92 92 AADIIDGLR 9 0 1 Unmodified _AADIIDGLR_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.2681 2 472.263999 942.513445 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.508 1 71.508 71.008 72.008 0 0 0 0 0.0055262 1 42878 67.993 37.431 1 62 1990 27 27 93 93 AADISLDNLVEGK 13 1 0 Unmodified _AADISLDNLVEGK_ 0 0 0 H7BZY0;B3KVT9;B7Z3E7;A6NNK5;Q12888 H7BZY0 H7BZY0 TP53BP1 Tumor suppressor p53-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.8544 2 672.853906 1343.69326 NaN NaN NaN 0.50679 0.000341 NaN NaN NaN NaN 95.937 0.27038 95.937 95.72 95.99 0 0 0 0 0.0054002 1 59796 57.836 39.524 1 NaN NaN 0 7794400 7794400 0 63 689 28 28 94 94 AADLNGDLTATR 12 0 1 Unmodified _AADLNGDLTATR_ 0 0 0 V9HW95;Q15293;E9PP27;Q5J7V8 V9HW95 V9HW95 HEL-S-84;RCN1 Reticulocalbin-1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.7938 2 609.309666 1216.60478 76405.19 0.63302 0.0003857 0.0060953 3.7139E-06 0.63911 0.00038942 609.309407855641 614.314111525113 44.208 0.48427 44.208 44.05 44.534 0 103 43 4 0 0 0 0.030675 1 24219 56.548 38.108 1 1.0207 1.0239 0 17592000 8778200 8814300 64 1757 29 29 95 95 AADPPAENSSAPEAEQGGAE 20 0 0 Unmodified _AADPPAENSSAPEAEQGGAE_ 0 0 0 P67809;Q7KZ24;H0Y449;A0JLU4 P67809 P67809 YBX1 Nuclease-sensitive element-binding protein 1 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.4069 2 949.405948 1896.79734 NaN NaN NaN -0.073739 -7.0008E-05 NaN NaN NaN NaN 33.024 0.40508 33.024 32.863 33.268 0 0 0 0 0.011663 1 16414 37.954 36.366 1 65 1657 30 30 96 96 AADPVPSFDESSQDTSEK 18 1 0 Unmodified _AADPVPSFDESSQDTSEK_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.4282 2 955.418524 1908.8225 NaN NaN NaN 0.37027 0.00035376 NaN NaN NaN NaN 60.356 0.28786 60.356 60.212 60.5 0 0 0 0 0.003132 1 35217 50.088 36.887 1 NaN NaN 0 5577000 0 5577000 66 1984 31 31 97 97 AADRLEQELLR 11 0 2 Unmodified _AADRLEQELLR_ 0 0 1 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 438.5774 3 438.577247 1312.70991 91475.4 0.081344 3.5676E-05 0.12228 5.3628E-05 0.20362 8.9304E-05 438.577186199833 445.249612215265 63.834 0.83966 63.834 63.277 64.116 0 198 74 5 0 0 0 0.0063514 1 37295 37.144 19.777 1 0.86508 0.92268 0 15413000 7303900 8108700 67 1307 32 32 98 98 AADRLEQELLR 11 0 2 Unmodified _AADRLEQELLR_ 0 0 1 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 438.5773 3 438.577247 1312.70991 91465.02 -0.06948 -3.0472E-05 -0.10197 -4.4722E-05 -0.17145 -7.5194E-05 438.577154775494 445.249423762107 75.036 0.66452 75.036 74.626 75.291 -7.6294E-06 177 41 6 0 0 0 0.046339 1 38980 20.43 11.917 1 0.7876 0.71274 0 4213600 2534500 1679200 68 1307 32 32 99 99 AADSDDGAVSAPAASDGGVSK 21 1 0 Unmodified _AADSDDGAVSAPAASDGGVSK_ 0 0 0 Q96GM8 Q96GM8 Q96GM8 TOE1 Target of EGR1 protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.4247 2 924.416316 1846.81808 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.165 1 33.165 32.665 33.665 0 0 0 0 0.004614 1 16567 45.115 39.012 1 69 1968 33 33 100 100 AADSICDGDLVDSQIR 16 0 1 Unmodified _AADSICDGDLVDSQIR_ 0 0 0 P35251 P35251 P35251 RFC1 Replication factor C subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.9037 2 867.90179 1733.78903 NaN NaN NaN -0.23664 -0.00020538 NaN NaN NaN NaN 78.815 0.44218 78.814 78.608 79.051 -7.6294E-06 0 0 0 3.3515E-06 1 46643 82.543 75.163 1 NaN NaN 0 8334100 8334100 0 70 1542 34 34 101 101 AADSICDGDLVDSQIR 16 0 1 Unmodified _AADSICDGDLVDSQIR_ 0 0 0 P35251 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.9038 2 867.90179 1733.78903 68914.81 0.73239 0.00063565 0.32299 0.00028032 1.0554 0.00091597 867.902007739842 872.907137855797 77.892 0.39392 77.892 77.686 78.08 0 94 33 5 0 0 0 8.534E-05 2 47105 80.69 80.69 1 0.30366 0.30073 0 12240000 9039400 3200300 71 1542 34 34 102;103 102 AADSICDGDLVDSQIR 16 0 1 Unmodified _AADSICDGDLVDSQIR_ 0 0 0 P35251 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 868.404 2 867.90179 1733.78903 66096.8 0.17937 0.00015567 0.80149 0.00069561 0.98086 0.00085129 868.403901923392 872.907106445155 90.303 0.56714 90.303 90.081 90.648 0 144 37 5 0 0 0 0.013198 2 49164 32.068 32.068 1 0.64033 0.54458 0 3140300 1971800 1168500 72 1542 34 34 104;105 105 AADSLQQNLQR 11 0 1 Unmodified _AADSLQQNLQR_ 0 0 0 Q1ED39;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.2858 2 622.323108 1242.63166 77948.52 0.46549 0.00028969 -0.36455 -0.00022687 0.10095 6.2823E-05 622.322893510636 627.327003693188 34.45 0.45013 34.45 34.098 34.548 0 106 38 4 0 0 0 0.022279 1 17124 80.219 80.219 1 0.81189 0.8214 0 15296000 9467400 5829000 73 1775 35 35 106 106 AADSLQQNLQR 11 0 1 Unmodified _AADSLQQNLQR_ 0 0 0 Q1ED39;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.2862 2 622.323108 1242.63166 76739.28 0.44118 0.00027455 -0.1377 -8.5692E-05 0.30348 0.00018886 622.322974515298 627.327199985295 33.672 0.39633 33.672 33.473 33.869 0 110 30 6 0 0 0 0.0088415 1 16902 93.267 93.267 1 0.85823 0.91479 0 24518000 13006000 11512000 74 1775 35 35 107 107 AADSLQQNLQR 11 0 1 Unmodified _AADSLQQNLQR_ 0 0 0 Q1ED39;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.327 2 622.323108 1242.63166 NaN NaN NaN -0.45803 -0.00028504 NaN NaN NaN NaN 39.429 0.47239 39.429 39.174 39.646 0 0 0 0 1.2689E-11 1 17958 119.21 100.77 1 NaN NaN 0 3956300 0 3956300 75 1775 35 35 108 108 AAEAADLGLGAAVPVELR 18 0 1 Acetyl (Protein N-term) _(ac)AAEAADLGLGAAVPVELR_ 1 0 0 Q9Y5Q8;Q5T7U1 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.9824 2 882.978158 1763.94176 65706.02 0.75663 0.00066809 0.36695 0.00032401 1.1236 0.0009921 883.480210295295 887.98331449579 132.84 0.5331 132.84 132.54 133.07 0 83 27 5 0 0 0 4.2078E-16 3 86777 115.12 115.12 1 1.2138 1.2646 0 5185000 2182500 3002500 76 2149 36 36 109;110;111 110 AAEAADLGLGAAVPVELR 18 0 1 Acetyl (Protein N-term) _(ac)AAEAADLGLGAAVPVELR_ 1 0 0 Q9Y5Q8;Q5T7U1 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.4799 2 882.978158 1763.94176 65176.76 0.84865 0.00074934 1.2912 0.0011401 2.1398 0.0018894 883.480879394934 887.983569037934 132.49 0.4337 132.49 132.29 132.72 0 86 24 5 0 0 0 2.4328E-10 1 88706 82.85 72.302 1 1.0449 1.0535 0 6301100 2859100 3442000 77 2149 36 36 112 112 AAEAFLR 7 0 1 Unmodified _AAEAFLR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 389.2159 2 389.216321 776.418088 95924.72 0.20634 8.0311E-05 -0.29915 -0.00011644 -0.092813 -3.6125E-05 389.216232503474 394.220277809518 42.38 0.55847 42.38 42.152 42.71 0 190 43 8 0 0 0 0.014567 2 22428 99.919 55.309 1 0.97255 1.0653 0 53046000 27076000 25969000 78 1742 37 37 113;114 113 AAEAFLR 7 0 1 Unmodified _AAEAFLR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.2168 2 389.216321 776.418088 98111.61 0.50228 0.00019549 0.092983 3.619E-05 0.59526 0.00023169 389.216254236961 394.220394167062 41.057 0.31718 41.057 40.87 41.187 0 110 25 6 0 0 0 0.0068253 2 21978 129.96 85.35 1 0.81983 0.94571 0 71672000 38473000 33199000 79 1742 37 37 115;116 116 AAEAFLR 7 0 1 Unmodified _AAEAFLR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 394.2203 2 389.216321 776.418088 95549.07 0.019318 7.5187E-06 0.084724 3.2976E-05 0.10404 4.0495E-05 389.216270176118 394.220334578153 47.868 0.5382 47.868 47.623 48.162 3.8147E-06 151 34 6 0 0 0 0.038498 2 23192 60.358 16.223 1 1.4395 1.2379 0 7711900 2941600 4770300 80 1742 37 37 117;118 117 AAEAFLR 7 0 1 Unmodified _AAEAFLR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 389.2163 2 389.216321 776.418088 99438 -0.22014 -8.5684E-05 0.42657 0.00016603 0.20642 8.0344E-05 389.216340593688 394.220525500391 47.776 0.38192 47.776 47.588 47.97 0 120 28 6 0 0 0 0.027056 2 22646 86.512 41.901 1 1.3639 1.1147 0 9199200 3513700 5685500 81 1742 37 37 119;120 120 AAECNIVVTQPR 12 0 1 Unmodified _AAECNIVVTQPR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3505 2 679.348268 1356.68198 72279.84 0.51061 0.00034688 -0.33204 -0.00022557 0.17857 0.00012131 679.348309713602 684.352509906652 46.115 0.85934 46.115 45.727 46.587 0 391 74 8 0 0 0 2.0673E-05 3 24741 103.08 99.343 1 1.2317 1.4299 0 176440000 76761000 99678000 82 1691 38 38 121;122;123 123 AAECNIVVTQPR 12 0 1 Unmodified _AAECNIVVTQPR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3535 2 679.348268 1356.68198 71942.95 0.41993 0.00028528 -0.27196 -0.00018476 0.14797 0.00010052 679.348152115056 684.352560620773 45.133 0.62717 45.133 44.853 45.48 3.8147E-06 336 53 8 0 0 0 6.6475E-18 2 24618 143.5 137.5 1 1.2453 1.4375 0 243110000 115400000 127700000 83 1691 38 38 124;125 124 AAECNIVVTQPR 12 0 1 Unmodified _AAECNIVVTQPR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.8493 2 679.348268 1356.68198 73137.96 0.53573 0.00036394 -0.76903 -0.00052244 -0.2333 -0.0001585 679.348099176973 684.351981010333 53.289 0.68791 53.289 52.936 53.624 3.8147E-06 285 51 9 0 0 0 0.016404 1 26322 42.21 38.056 1 1.6326 1.3682 0 25276000 9034900 16241000 84 1691 38 38 126 126 AAECNIVVTQPR 12 0 1 Unmodified _AAECNIVVTQPR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.3524 2 679.348268 1356.68198 73231.1 0.46134 0.00031341 0.079045 5.3699E-05 0.54039 0.00036711 679.348582302768 684.352429618097 53.719 0.78193 53.719 53.308 54.09 -3.8147E-06 262 54 8 0 0 0 0.0041623 1 25962 54.198 54.198 1 1.7146 1.4533 0 18617000 5566900 13050000 85 1691 38 38 127 127 AAEFGEPTSEQTGTAAGK 18 1 0 Unmodified _AAEFGEPTSEQTGTAAGK_ 0 0 0 O95425 O95425 O95425 SVIL Supervillin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 880.4136 2 876.407763 1750.80097 NaN NaN NaN 0.17834 0.0001563 NaN NaN NaN NaN 37.641 0.35048 37.641 37.449 37.799 -3.8147E-06 0 0 0 2.5415E-23 1 19107 124.07 115.66 1 NaN NaN 0 6785400 0 6785400 86 1425 39 39 128 128 AAEFGEPTSEQTGTAAGK 18 1 0 Unmodified _AAEFGEPTSEQTGTAAGK_ 0 0 0 O95425 O95425 O95425 SVIL Supervillin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.416 2 876.407763 1750.80097 66330.98 0.53584 0.00046962 0.20825 0.00018251 0.74409 0.00065213 876.40726708279 880.415096074102 36.696 0.33269 36.696 36.536 36.869 0 77 22 5 0 0 0 1.3103E-05 2 18832 77.644 76.465 1 3.0214 3.1625 0 10499000 2143900 8354800 87 1425 39 39 129;130 129 AAEISAMLK 9 1 0 Oxidation (M) _AAEISAM(ox)LK_ AAEISAM(1)LK AAEISAM(67.17)LK 0 1 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.2557 2 475.254785 948.495018 79530.27 0.090063 4.2803E-05 1.6744 0.00079579 1.7645 0.00083859 475.255128222271 479.263050513892 38.329 0.31981 38.329 38.179 38.499 0 87 26 5 0 0 0 0.0025497 1 20081 67.169 43.646 1 0.66411 0.6684 0 27661000 17428000 10234000 88 1965 40 40 131 131 1809 AAELETDIR 9 0 1 Unmodified _AAELETDIR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2637 2 509.264196 1016.51384 NaN NaN NaN -0.79002 -0.00040233 NaN NaN NaN NaN 41.817 0.8137 41.817 41.488 42.302 0 0 0 0 0.0068846 1 22366 71.379 28.133 1 NaN NaN 0 12040000 12040000 0 89 1418 41 41 132 132 AAELIANSLATAGDGLIELR 20 0 1 Unmodified _AAELIANSLATAGDGLIELR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;C9JW96 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1000.0496 2 999.546936 1997.07932 61078.61 0.38712 0.00038694 0.20895 0.00020885 0.59606 0.00059579 1000.04871899598 1004.55137510906 124.32 0.70514 124.32 124.05 124.76 0 381 48 11 0 0 0 1.3125E-23 3 80578 133.47 133.47 1 1.4608 1.7056 0 198310000 82812000 115500000 90 730 42 42 133;134;135 134 AAELIANSLATAGDGLIELR 20 0 1 Unmodified _AAELIANSLATAGDGLIELR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;C9JW96 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 999.5471 2 999.546936 1997.07932 62616.41 0.71976 0.00071943 -0.14416 -0.0001441 0.57559 0.00057533 1000.0483873546 1004.5511607639 119.98 0.31635 119.98 119.8 120.12 -7.6294E-06 76 22 5 0 0 0 2.8674E-06 1 79161 63.894 63.894 1 1.1221 1.1173 0 7159800 2922000 4237800 91 730 42 42 136 136 AAELIANSLATAGDGLIELR 20 0 1 Unmodified _AAELIANSLATAGDGLIELR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;C9JW96 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1005.0522 2 999.546936 1997.07932 61055.13 0.62288 0.0006226 0.12451 0.00012445 0.74739 0.00074705 1000.04853567265 1004.55130414718 123.94 0.82925 123.94 123.61 124.44 0 393 55 12 0 0 0 3.0661E-32 2 82228 150.12 150.12 1 1.4704 1.6897 0 197310000 78600000 118710000 92 730 42 42 137;138 138 AAELIANSLATAGDGLIELR 20 0 1 Unmodified _AAELIANSLATAGDGLIELR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;C9JW96 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1005.0517 2 999.546936 1997.07932 NaN NaN NaN -0.1131 -0.00011305 NaN NaN NaN NaN 134.64 0.2438 134.64 134.56 134.8 0 0 0 0 2.1774E-97 1 82304 203.85 170.66 1 NaN NaN 0 66761000 0 66761000 93 730 42 42 139 139 AAELIANSLATAGDGLIELR 20 0 1 Unmodified _AAELIANSLATAGDGLIELR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;C9JW96 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1004.5521 2 999.546936 1997.07932 59862.8 0.40153 0.00040135 0.43409 0.0004339 0.83562 0.00083524 999.546286887967 1004.5512197835 134.59 0.2565 134.59 134.5 134.76 0 25 6 7 0 0 0 0.00013518 1 81416 41.743 41.743 1 2.3997 2.0942 0 73407000 21993000 51413000 94 730 42 42 140 140 AAELTATQVEEEEEEEDFRK 20 1 1 Unmodified _AAELTATQVEEEEEEEDFRK_ 0 0 1 B3KMD9;B3KMC2;B3KMD2;A8KAE0;O75717 B3KMD9 B3KMD9 WDHD1 WD repeat and HMG-box DNA-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.7035 3 785.027441 2352.06049 NaN NaN NaN 0.12157 9.5437E-05 NaN NaN NaN NaN 69.048 0.30793 69.048 68.935 69.243 0 0 0 0 8.2038E-05 1 40055 53.278 45.286 1 NaN NaN 0 6449700 0 6449700 95 792 43 43 141 141 AAESLADPTEYENLFPGLK 19 1 0 Unmodified _AAESLADPTEYENLFPGLK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1033.5135 2 1033.00985 2064.00515 61068.55 0.53663 0.00055434 -0.066962 -6.9173E-05 0.46967 0.00048517 1033.51076600127 1037.51859647799 122.13 0.40799 122.13 121.92 122.33 7.6294E-06 137 27 7 0 0 0 0.0039055 1 79020 33.192 29.475 1 1.9958 2.0572 0 10873000 3827800 7045400 96 1545 44 44 142 142 AAESLADPTEYENLFPGLK 19 1 0 Unmodified _AAESLADPTEYENLFPGLK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1037.0181 2 1033.00985 2064.00515 61792.94 0.369 0.00038118 0.11283 0.00011655 0.48183 0.00049773 1033.51044603942 1037.5188778444 121.71 0.39181 121.71 121.51 121.9 7.6294E-06 135 28 8 0 0 0 8.5353E-12 1 80576 100.38 100.38 1 1.938 1.9919 0 11680000 4527700 7151900 97 1545 44 44 143 143 AAESLTAIPEPASPQLLETPIHASQIQK 28 1 0 Unmodified _AAESLTAIPEPASPQLLETPIHASQIQK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 983.8682 3 980.860744 2939.5604 66334.66 0.63551 0.00062334 -0.084792 -8.317E-05 0.55072 0.00054018 981.19379932982 983.866722549529 110.87 0.34488 110.87 110.72 111.06 0 66 20 5 0 0 0 0.00060577 1 69715 25.51 25.51 1 0.52644 0.51603 0 20864000 12571000 8293500 98 1738 45 45 144 144 AAESLTAIPEPASPQLLETPIHASQIQK 28 1 0 Unmodified _AAESLTAIPEPASPQLLETPIHASQIQK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.194 3 980.860744 2939.5604 65961.09 0.15894 0.00015589 0.14669 0.00014389 0.30563 0.00029978 981.194276847634 983.865991346493 110.28 0.34968 110.28 110.08 110.43 7.6294E-06 86 22 6 0 0 0 0.00037284 1 71004 29.906 29.906 1 0.3566 0.38268 0 22889000 13905000 8984500 99 1738 45 45 145 145 AAESLTAIPEPASPQLLETPIHASQIQK 28 1 0 Unmodified _AAESLTAIPEPASPQLLETPIHASQIQK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 981.1953 3 980.860744 2939.5604 61500.45 0.38956 0.00038211 0.11137 0.00010924 0.50093 0.00049134 981.194970964816 984.200598229322 121.79 0.3279 121.79 121.62 121.95 0 125 17 11 0 0 0 2.3897E-19 3 72542 80.359 80.359 1 0.426 0.3343 0 11379000 7503100 3875600 100 1738 45 45 146;147;148 148 AAESLTAIPEPASPQLLETPIHASQIQK 28 1 0 Unmodified _AAESLTAIPEPASPQLLETPIHASQIQK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 981.1962 3 980.860744 2939.5604 61822.3 0.42003 0.000412 0.32489 0.00031867 0.74492 0.00073067 981.195390416101 983.866764796998 121.6 0.34496 121.6 121.42 121.76 -7.6294E-06 132 18 11 0 0 0 1.1484E-06 2 71456 38.843 38.843 1 0.37595 0.31063 0 11648000 8531300 3116500 101 1738 45 45 149;150 149 AAESSSDSSDSDSSEDDEAPSKPAGTTK 28 2 0 Unmodified _AAESSSDSSDSDSSEDDEAPSKPAGTTK_ 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.7252 3 920.047958 2757.12204 NaN NaN NaN 0.1121 0.00010314 NaN NaN NaN NaN 16.621 0.17172 16.621 16.516 16.687 0 0 0 0 0.045086 1 3904 27.89 27.011 1 NaN NaN 0 1399700 0 1399700 102 468 46 46 151 151 AAESSSDSSDSDSSEDDEAPSKPAGTTK 28 2 0 Unmodified _AAESSSDSSDSDSSEDDEAPSKPAGTTK_ 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.3932 3 920.047958 2757.12204 65245.84 0.3512 0.00032312 0.38502 0.00035423 0.73622 0.00067736 920.382233765806 925.391322616675 16.609 0.22433 16.609 16.498 16.723 0 35 9 7 0 0 0 0.00015308 1 3713 35.016 35.016 1 2.1773 2.5126 0 2322700 795410 1527300 103 468 46 46 152 152 AAESSSDSSDSDSSEDDEAPSKPAGTTK 28 2 0 Unmodified _AAESSSDSSDSDSSEDDEAPSKPAGTTK_ 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 925.7268 3 920.047958 2757.12204 63881.86 -0.026053 -2.397E-05 0.74187 0.00068256 0.71582 0.00065859 920.717055861681 925.725845151929 18.174 0.27327 18.174 18.054 18.327 0 114 18 9 0 0 0 0.056808 1 3852 12.023 12.023 1 1.7043 1.4981 0 1952300 715890 1236400 104 468 46 46 153 153 AAFALGGLGSGFASNR 16 0 1 Unmodified _AAFALGGLGSGFASNR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.3921 2 748.386239 1494.75793 73375 0.49891 0.00037337 0.73242 0.00054813 1.2313 0.00092151 748.386859015296 753.390820676018 102.82 0.63432 102.82 102.57 103.2 0 165 54 5 0 0 0 0.00015361 1 63312 68.44 68.44 1 1.1508 1.1857 0 10210000 4950200 5259500 105 1259 47 47 154 154 AAFALGGLGSGFASNR 16 0 1 Unmodified _AAFALGGLGSGFASNR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.3913 2 748.386239 1494.75793 73689.55 0.59142 0.00044261 1.0588 0.00079241 1.6503 0.001235 748.386827331663 753.390927920369 102.08 0.50491 102.08 101.86 102.37 0 150 38 6 0 0 0 0.00015532 1 64365 72.29 72.29 1 1.1426 1.123 0 14265000 7151500 7114000 106 1259 47 47 155 155 AAFALGGLGSGFASNR 16 0 1 Unmodified _AAFALGGLGSGFASNR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.3918 2 748.386239 1494.75793 74202.27 0.64408 0.00048202 0.18652 0.00013959 0.8306 0.00062161 748.38614661701 753.892273786105 114.62 0.47613 114.62 114.35 114.83 0 54 20 5 0 0 0 0.047031 1 66107 23.092 13.138 1 1.2432 1.0751 0 1632400 806820 825610 107 1259 47 47 156 156 AAFALGGLGSGFASNREELSALVAPAFAHTSQVLVDK 37 1 1 Unmodified _AAFALGGLGSGFASNREELSALVAPAFAHTSQVLVDK_ 0 0 1 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.4882 4 926.237604 3700.92131 64617.27 0.78459 0.00072672 -0.71328 -0.00066067 0.07131 6.605E-05 926.739074052093 931.244862802562 131.98 0.33154 131.98 131.83 132.16 0 94 22 8 0 0 0 0.0085677 1 88359 18.498 16.795 1 0.96554 1.0767 0 11211000 5988300 5222600 108 1259 48 48 157 157 AAFGCFGNWLATVEQR 16 0 1 Unmodified _AAFGCFGNWLATVEQR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.9431 2 913.93577 1825.85699 65021.07 1.0587 0.00096754 -0.43155 -0.00039441 0.6271 0.00057313 914.43614433167 918.940376301803 122.97 0.35849 122.97 122.79 123.15 0 94 25 7 0 0 0 0.011459 1 81629 42.209 36.023 1 0.68181 0.6891 0 9849600 5707500 4142200 109 716 49 49 158 158 AAFGLSEAGFNTACVTK 17 1 0 Unmodified _AAFGLSEAGFNTACVTK_ 0 0 0 D6RFM5;A0A024QZ30;B4DYN5;P31040;A0A087X1I3;Q0QF12 D6RFM5 D6RFM5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.9253 2 872.422162 1742.82977 NaN NaN NaN -0.020742 -1.8096E-05 NaN NaN NaN NaN 95.821 0.2628 95.821 95.685 95.948 0 0 0 0 0.045007 1 58276 33.204 20.223 1 NaN NaN 0 5259700 5259700 0 110 10 50 50 159 159 AAFGLSEAGFNTACVTK 17 1 0 Unmodified _AAFGLSEAGFNTACVTK_ 0 0 0 D6RFM5;A0A024QZ30;B4DYN5;P31040;A0A087X1I3;Q0QF12 D6RFM5 D6RFM5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.9238 2 872.422162 1742.82977 NaN NaN NaN 0.4863 0.00042426 NaN NaN NaN NaN 95.067 0.33955 95.067 94.893 95.232 0 0 0 0 0.0006825 2 59156 63.727 54.294 1 NaN NaN 0 4041900 4041900 0 111 10 50 50 160;161 161 AAFQLR 6 0 1 Unmodified _AAFQLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 353.2056 2 353.205756 704.396959 101217.3 0.29021 0.00010251 -0.12121 -4.2812E-05 0.16901 5.9694E-05 353.205887280017 358.209554132124 40.848 0.49414 40.848 40.591 41.086 0 111 34 6 0 0 0 0.037498 1 21880 123.07 29.475 1 1.2254 1.3937 0 123580000 57023000 66556000 112 2038 51 51 162 162 AAFTVSLDPGPLEQFPHSMEPQLR 24 0 1 Oxidation (M) _AAFTVSLDPGPLEQFPHSM(ox)EPQLR_ AAFTVSLDPGPLEQFPHSM(1)EPQLR AAFTVSLDPGPLEQFPHSM(43.64)EPQLR 0 1 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.4456 3 895.111005 2682.31119 63019.56 0.63962 0.00057253 -0.12264 -0.00010977 0.51698 0.00046276 895.445583211792 898.781259713548 112.45 0.58178 112.45 112.19 112.77 -7.6294E-06 320 42 13 0 0 0 3.7339E-06 2 72735 43.64 43.64 1 1.336 1.5224 0 102730000 44211000 58523000 113 302 52 52 163;164 164 214 AAFTVSLDPGPLEQFPHSMEPQLR 24 0 1 Unmodified _AAFTVSLDPGPLEQFPHSMEPQLR_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 890.1134 3 889.779367 2666.31627 64612.94 0.59032 0.00052525 -0.051078 -4.5449E-05 0.53924 0.0004798 890.449222078766 893.449365670682 131.62 0.40657 131.62 131.46 131.86 0 105 19 8 0 0 0 0.013095 1 79947 20.496 16.785 1 1.0565 0.88951 0 4573600 2180700 2392900 114 302 52 53 165 165 AAFVLPEFAR 10 0 1 Unmodified _AAFVLPEFAR_ 0 0 0 P19623;K7EL89 P19623 P19623 SRM Spermidine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.8116 2 560.811116 1119.60768 85072.8 0.71778 0.00040254 0.13073 7.3317E-05 0.84851 0.00047586 560.811282502446 565.815481866435 107.88 0.74842 107.88 107.53 108.28 0 159 54 4 0 0 0 0.036089 2 67148 40.352 21.912 1 0.86883 0.89873 0 6057700 2557300 3500300 115 1500 53 54 166;167 166 AAFVLPEFAR 10 0 1 Unmodified _AAFVLPEFAR_ 0 0 0 P19623;K7EL89 P19623 P19623 SRM Spermidine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8152 2 560.811116 1119.60768 84324.84 0.76722 0.00043026 -0.48999 -0.00027479 0.27722 0.00015547 560.810935596266 565.814938468478 107.14 0.4155 107.14 106.89 107.3 0 78 28 4 0 0 0 0.030208 1 68343 52.482 14.754 1 1.2328 1.2312 0 9011000 4177700 4833300 116 1500 53 54 168 168 AAGDTTVIENSDVSPETESSEK 22 1 0 Unmodified _AAGDTTVIENSDVSPETESSEK_ 0 0 0 A0A024R663;Q86UP2;G3V4Y7;B7Z6P3;H0YJP2;B3KWP6 A0A024R663 A0A024R663 KTN1 Kinectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1137.5206 2 1133.51388 2265.01321 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.006 1 55.006 54.506 55.506 0 0 0 0 0.014282 1 31487 40.025 28.048 1 117 197 54 55 169 169 AAGFERPSPVQLK 13 1 1 Unmodified _AAGFERPSPVQLK_ 0 0 1 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2686 3 467.261259 1398.76195 88703.27 0.33591 0.00015696 0.32788 0.00015321 0.6638 0.00031017 467.595473806484 473.268848749728 52.014 0.39287 52.014 51.784 52.177 0 113 30 5 0 0 0 0.031761 1 28852 25.178 15.644 1 2.4102 2.6972 0 20988000 3705600 17283000 118 1901 55 56 170 170 AAGGFTHDELLK 12 1 0 Unmodified _AAGGFTHDELLK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 420.2189 3 420.21906 1257.63535 92414.76 0.43985 0.00018483 -0.25983 -0.00010918 0.18002 7.5648E-05 420.21892522735 422.890289431945 48.705 0.66632 48.705 48.404 49.07 0 285 50 9 0 0 0 0.0084858 2 26555 26.532 16.528 1 0.97802 1.1022 0 127180000 63628000 63549000 119 1618 56 57 171;172 172 AAGGFTHDELLK 12 1 0 Unmodified _AAGGFTHDELLK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8324 2 629.824952 1257.63535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.58 1 48.58 48.08 49.08 0 0 0 0 1.0101E-23 1 26506 141.95 99.845 1 120 1618 56 57 173 173 AAGGFTHDELLK 12 1 0 Unmodified _AAGGFTHDELLK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.8917 3 420.21906 1257.63535 92362.48 0.1657 6.9632E-05 0.11166 4.6921E-05 0.27736 0.00011655 420.218896520714 422.890554775185 47.015 0.49068 47.015 46.702 47.193 0 273 43 8 0 0 0 0.0052701 2 25940 33.227 23.54 1 0.93597 1.0495 0 113310000 61308000 51998000 121 1618 56 57 174;175 175 AAGGFTHDELLK 12 1 0 Unmodified _AAGGFTHDELLK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8338 2 629.824952 1257.63535 NaN NaN NaN -0.030124 -1.8973E-05 NaN NaN NaN NaN 47.018 0.42298 47.018 46.724 47.147 0 0 0 0 1.477E-13 1 25942 127.42 87.379 1 NaN NaN 0 23526000 0 23526000 122 1618 56 57 176 176 AAGGFTHDELLK 12 1 0 Unmodified _AAGGFTHDELLK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.8271 2 629.824952 1257.63535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.866 1 46.866 46.366 47.366 0 0 0 0 2.3237E-30 1 25943 145.99 105.94 1 123 1618 56 57 177 177 AAGGFTHDELLK 12 1 0 Unmodified _AAGGFTHDELLK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.8327 2 629.824952 1257.63535 76087.83 0.55826 0.00035161 -0.93154 -0.00058671 -0.37328 -0.0002351 630.324594493621 633.831916822872 55.902 0.56885 55.902 55.597 56.166 0 158 37 5 0 0 0 0.0060996 2 27388 49.466 31.557 1 0.92947 0.75618 0 7108100 3017100 4091000 124 1618 56 57 178;179 178 AAGLVSDLDADSGLTLSR 18 0 1 Unmodified _AAGLVSDLDADSGLTLSR_ 0 0 0 Q9BW92;Q6ST48;F6S7Q7;U3KQG0;Q9H045 Q9BW92 Q9BW92 TARS2;DKFZp667F1511 Threonine--tRNA ligase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.5698 2 880.95488 1759.89521 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.66 1 105.66 105.16 106.16 -7.6294E-06 0 0 0 0.040009 1 65486 38.3 26.768 1 125 2011 57 58 180 180 AAGPSLSHTSGGTQSK 16 1 0 Unmodified _AAGPSLSHTSGGTQSK_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.3671 2 743.368244 1484.72193 70765.02 0.53459 0.0003974 -0.12546 -9.3261E-05 0.40914 0.00030414 743.368070666194 747.375176931142 16.915 0.2546 16.915 16.826 17.081 0 34 8 6 0 0 0 2.2376E-06 1 4143 93.011 93.011 1 0.66932 0.70013 0 11976000 7225900 4750500 126 1525 58 59 181 181 AAGPSLSHTSGGTQSK 16 1 0 Unmodified _AAGPSLSHTSGGTQSK_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.9157 3 495.914588 1484.72193 85176.29 0.43042 0.00021345 0.31743 0.00015742 0.74785 0.00037087 495.914492214085 498.586339102766 16.881 0.37322 16.881 16.723 17.096 0 50 13 8 0 0 0 3.7771E-05 2 3928 71.08 71.08 1 0.83832 0.86936 0 9841300 5801700 4039500 127 1525 58 59 182;183 182 AAGPSLSHTSGGTQSK 16 1 0 Unmodified _AAGPSLSHTSGGTQSK_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3774 2 743.368244 1484.72193 70488.96 0.87935 0.00065368 0.45762 0.00034018 1.337 0.00099386 743.368198639982 747.375705013797 16.873 0.21407 16.873 16.8 17.014 0 29 7 6 0 0 0 2.6002E-06 2 3931 91.858 81.334 1 0.83783 0.87644 0 10365000 5876800 4487900 128 1525 58 59 184;185 184 AAGTLYTYPENWR 13 0 1 Acetyl (Protein N-term) _(ac)AAGTLYTYPENWR_ 1 0 0 Q53YD7;P26641;B4DUK7;Q2F838;B4DSR4 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.3827 2 792.37808 1582.74161 70297.37 1.0052 0.0007965 -0.96572 -0.00076521 0.039478 3.1282E-05 792.878359959528 797.381949684994 111.9 0.45114 111.9 111.67 112.12 0 101 32 4 0 0 0 0.00022128 2 70459 79.974 79.974 1 1.4817 1.475 0 8149000 4057700 4091300 129 1522 59 60 186;187 186 AAGVEAAAEVAATEIK 16 1 0 Acetyl (Protein N-term) _(ac)AAGVEAAAEVAATEIK_ 1 0 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.9045 2 771.904128 1541.7937 68844.95 1.2517 0.0009662 -0.10438 -8.0575E-05 1.1473 0.00088563 771.903907044723 775.911159800075 127.08 0.73935 127.08 126.76 127.5 0 267 43 9 0 0 0 4.0014E-12 2 82620 120.53 106.87 1 1.5953 1.7884 0 65177000 24503000 40673000 130 1599 60 61 188;189 189 AAGVEAAAEVAATEIK 16 1 0 Acetyl (Protein N-term) _(ac)AAGVEAAAEVAATEIK_ 1 0 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.9113 2 771.904128 1541.7937 68409.66 0.96362 0.00074382 -0.12198 -9.4155E-05 0.84164 0.00064967 771.903827705113 775.911195585237 126.79 0.75996 126.79 126.45 127.21 0 296 47 9 0 0 0 2.4174E-12 2 84418 122.42 106.88 1 1.6353 1.815 0 48764000 18254000 30510000 131 1599 60 61 190;191 190 AAGVNVEPFWPGLFAK 16 1 0 Unmodified _AAGVNVEPFWPGLFAK_ 0 0 0 Q6ICQ4;Q6FG99;A0A024R608;P05386;Q7Z612 Q6ICQ4 Q6ICQ4 RPLP1 60S acidic ribosomal protein P1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 851.9524 2 851.951215 1701.88788 65270.18 0.97975 0.0008347 0.004169 3.5518E-06 0.98392 0.00083825 852.452673648303 855.958303980554 126.32 1.058 126.32 125.99 127.05 7.6294E-06 598 76 11 0 0 0 9.2664E-25 3 82228 144.17 144.17 1 0.75416 0.88936 0 341510000 195130000 146380000 132 195 61 62 192;193;194 193 AAGVNVEPFWPGLFAK 16 1 0 Unmodified _AAGVNVEPFWPGLFAK_ 0 0 0 Q6ICQ4;Q6FG99;A0A024R608;P05386;Q7Z612 Q6ICQ4 Q6ICQ4 RPLP1 60S acidic ribosomal protein P1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 851.9526 2 851.951215 1701.88788 65419.94 1.0258 0.00087391 -0.11717 -9.9822E-05 0.90861 0.00077409 852.452565291301 855.958296728544 125.89 1.2184 125.89 125.37 126.59 -7.6294E-06 533 78 12 0 0 0 1.0718E-24 3 83750 143.17 143.17 1 0.76434 0.89949 0 395530000 226000000 169530000 133 195 61 62 195;196;197 197 AAGVNVEPFWPGLFAK 16 1 0 Unmodified _AAGVNVEPFWPGLFAK_ 0 0 0 Q6ICQ4;Q6FG99;A0A024R608;P05386;Q7Z612 Q6ICQ4 Q6ICQ4 RPLP1 60S acidic ribosomal protein P1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 851.9518 2 851.951215 1701.88788 65654.65 0.82029 0.00069884 0.13515 0.00011514 0.95544 0.00081399 852.453163157551 855.958070378982 134.72 0.27393 134.72 134.53 134.8 0 21 6 7 0 0 0 0.0015175 1 82450 44.847 44.847 1 0.66 0.57528 0 159420000 98128000 61295000 134 195 61 62 198 198 AAIAQALAGEVSVVPPSR 18 0 1 Unmodified _AAIAQALAGEVSVVPPSR_ 0 0 0 A0MNN4;Q2TAY7 A0MNN4 A0MNN4 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.4902 2 868.488693 1734.96283 67843.23 0.741 0.00064355 0.17068 0.00014823 0.91168 0.00079179 868.489089663163 873.492529464775 105.18 0.48103 105.18 104.89 105.38 0 159 38 5 0 0 0 1.8752E-22 2 65082 132.86 123.67 1 1.3964 1.4228 0 14813000 5776300 9037000 135 642 62 63 199;200 200 AAIAQALAGEVSVVPPSR 18 0 1 Unmodified _AAIAQALAGEVSVVPPSR_ 0 0 0 A0MNN4;Q2TAY7 A0MNN4 A0MNN4 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.4901 2 868.488693 1734.96283 67089.45 0.79076 0.00068676 0.41194 0.00035777 1.2027 0.0010445 868.489280779765 873.492515659176 104.47 0.55604 104.47 104.21 104.76 0 154 43 5 0 0 0 1.0095E-11 4 66121 105 93.243 1 1.2592 1.2456 0 12440000 5376600 7063300 136 642 62 63 201;202;203;204 203 AAIATFYVNVK 11 1 0 Unmodified _AAIATFYVNVK_ 0 0 0 Q71F23;A8K8D2;Q09GN1;A5D8X7 Q71F23 Q71F23 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8449 2 598.837331 1195.66011 79280.35 0.55203 0.00033058 -0.12067 -7.226E-05 0.43136 0.00025832 598.837688964377 602.844299531753 103.6 0.30403 103.6 103.43 103.73 0 84 19 7 0 0 0 0.0058056 1 58895 55.549 55.549 1 1.4995 1.1849 0 3053000 1008800 2044200 137 1866 63 64 205 205 AAIATFYVNVK 11 1 0 Unmodified _AAIATFYVNVK_ 0 0 0 Q71F23;A8K8D2;Q09GN1;A5D8X7 Q71F23 Q71F23 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.8455 2 598.837331 1195.66011 80022.16 0.40491 0.00024247 0.19122 0.00011451 0.59612 0.00035698 598.837605446619 602.84462493013 103.38 0.3512 103.38 103.2 103.55 -7.6294E-06 81 24 5 0 0 0 0.018526 1 57900 44.753 44.753 1 1.3436 1.0889 0 2663600 1126300 1537300 138 1866 63 64 206 206 AAIDWFDGK 9 1 0 Unmodified _AAIDWFDGK_ 0 0 0 B4E312;A0A075B7D9;Q92804;Q70T18;Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637 B4E312;Q70T18 B4E312 TAF15;FUS TATA-binding protein-associated factor 2N;RNA-binding protein FUS ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7512 2 511.750724 1021.4869 NaN NaN NaN 0.073951 3.7845E-05 NaN NaN NaN NaN 85.56 0.37499 85.56 85.347 85.722 0 0 0 0 0.027012 1 52652 54.436 12.56 1 NaN NaN 0 12764000 12764000 0 139 399;734 64 65 207 207 AAIEEIK 7 1 0 Unmodified _AAIEEIK_ 0 0 0 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1;B3KQ09 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 387.2239 2 387.223811 772.433069 99316.99 0.4851 0.00018784 -0.44098 -0.00017076 0.044121 1.7085E-05 387.223617404374 391.230836721911 30.007 0.28062 30.007 29.853 30.133 0 75 22 6 0 0 0 0.026953 2 14609 83.614 30.931 1 0.77496 0.85816 0 46094000 25393000 20700000 140 80 65 66 208;209 208 AAIGCGIVESILNWVK 16 1 0 Unmodified _AAIGCGIVESILNWVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 869.4766 2 865.468915 1728.92328 66154.27 0.71104 0.00061539 0.11361 9.8324E-05 0.82465 0.00071371 865.468863292334 869.476041340021 134.93 0.20032 134.93 134.85 135.05 0 12 4 4 0 0 0 0.054793 1 81783 22.578 22.578 1 1.4046 1.216 0 247160000 99617000 147550000 141 1471 66 67 210 210 AAIGLLAR 8 0 1 Unmodified _AAIGLLAR_ 0 0 0 H3BQB1;P07741;H3BQF1;H3BQZ9;H3BSW3 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.7596 2 392.755613 783.496673 97070.41 -0.11685 -4.5893E-05 0.023905 9.3888E-06 -0.092944 -3.6504E-05 392.75542729758 397.759660933982 64.805 0.63145 64.805 64.408 65.039 0 221 57 6 0 0 0 0.010089 1 37179 73.039 10.325 1 2.8472 2.9126 0 34421000 8648300 25773000 142 1302 67 68 211 211 AAIGLLAR 8 0 1 Unmodified _AAIGLLAR_ 0 0 0 H3BQB1;P07741;H3BQF1;H3BQZ9;H3BSW3 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 392.7553 2 392.755613 783.496673 95887.8 0.37392 0.00014686 -0.39502 -0.00015515 -0.021107 -8.2901E-06 392.755367568035 397.759495482839 63.394 0.66658 63.394 62.957 63.623 0 205 55 5 0 0 0 0.0056884 2 37271 89.673 10.22 1 3.1636 3.4695 0 40140000 9291900 30848000 143 1302 67 68 212;213 213 AAIISAEGDSK 11 1 0 Unmodified _AAIISAEGDSK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.2845 2 531.277303 1060.54005 83694.41 0.62418 0.00033161 -0.36063 -0.0001916 0.26355 0.00014002 531.276990280851 535.284146178188 29.585 0.57727 29.585 29.368 29.945 0 195 43 8 0 0 0 2.4377E-05 2 14235 119.68 102.21 1 1.5106 1.7675 0 298570000 119740000 178820000 144 730 68 69 214;215 214 AAIISAEGDSK 11 1 0 Unmodified _AAIISAEGDSK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.2842 2 531.277303 1060.54005 84118.13 0.60632 0.00032212 -1.4006 -0.00074412 -0.7943 -0.00042199 531.275568885908 535.283847446275 33.738 0.33982 33.738 33.575 33.915 0 114 28 7 0 0 0 0.0026553 2 14804 76.282 61.022 1 2.7866 2.2079 0 18628000 5159100 13469000 145 730 68 69 216;217 216 AAIISAEGDSK 11 1 0 Unmodified _AAIISAEGDSK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.2845 2 531.277303 1060.54005 NaN NaN NaN -0.67269 -0.00035739 NaN NaN NaN NaN 33.83 0.37033 33.83 33.604 33.974 0 0 0 0 0.0036111 1 14356 67.207 51.063 1 NaN NaN 0 14933000 0 14933000 146 730 68 69 218 218 AAILPTSIFLTNK 13 1 0 Unmodified _AAILPTSIFLTNK_ 0 0 0 B4DV00;B2RDD7;O14744;H0YJX6 B4DV00 B4DV00 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.9123 2 694.911027 1387.8075 NaN NaN NaN 0.24869 0.00017282 NaN NaN NaN NaN 117.55 0.43588 117.55 117.31 117.74 -7.6294E-06 0 0 0 0.0073524 1 75295 57.348 41.015 1 NaN NaN 0 4480300 4480300 0 147 885 69 70 219 219 AAILPTSIFLTNK 13 1 0 Unmodified _AAILPTSIFLTNK_ 0 0 0 B4DV00;B2RDD7;O14744;H0YJX6 B4DV00 B4DV00 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.9117 2 694.911027 1387.8075 NaN NaN NaN -0.15204 -0.00010566 NaN NaN NaN NaN 116.98 0.43732 116.98 116.75 117.19 7.6294E-06 0 0 0 0.00533 1 76589 65.719 47.457 1 NaN NaN 0 6255200 6255200 0 148 885 69 70 220 220 AAISFPRKR 9 1 2 Acetyl (Protein N-term) _(ac)AAISFPRKR_ 1 0 2 Q8WY78 Q8WY78 Q8WY78 C20orf161 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3208 2 544.322183 1086.62981 NaN NaN NaN -1.3533 -0.00073662 NaN NaN NaN NaN 71.796 0.29737 71.796 71.632 71.929 0 0 0 0 0.00552 1 41892 65.038 18.576 1 NaN NaN 0 2781100 2781100 0 149 1944 70 71 221 221 AAITTLK 7 1 0 Unmodified _AAITTLK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 359.2288 2 359.228897 716.44324 101120.3 -0.067456 -2.4232E-05 0.025916 9.3097E-06 -0.04154 -1.4922E-05 359.228805955735 363.235926269379 30.228 0.33026 30.228 30.089 30.419 1.9073E-06 122 26 7 0 0 0 0.02688 2 14746 86.866 29.403 1 1.0182 1.1555 0 140580000 74920000 65660000 150 1827 71 72 222;223 222 AAITTLK 7 1 0 Unmodified _AAITTLK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 363.236 2 359.228897 716.44324 102098.1 0.098306 3.5314E-05 -0.14202 -5.1016E-05 -0.04371 -1.5702E-05 359.228814065657 363.235835286561 34.406 0.32192 34.406 34.256 34.578 -3.8147E-06 91 23 6 0 0 0 0.059659 1 15167 50.632 13.538 1 1.2603 1.0117 0 8052700 3290000 4762700 151 1827 71 72 224 224 AAITTLK 7 1 0 Unmodified _AAITTLK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 359.229 2 359.228897 716.44324 101794.3 0.075867 2.7254E-05 -0.13242 -4.7571E-05 -0.056558 -2.0317E-05 359.228784996374 363.235871097208 34.447 0.2931 34.447 34.281 34.574 3.8147E-06 87 20 6 0 0 0 0.047715 1 14742 56.122 14.82 1 1.2158 0.99081 0 6642500 2916500 3726000 152 1827 71 72 225 225 AALAHSEEVTASQVAATK 18 1 0 Unmodified _AALAHSEEVTASQVAATK_ 0 0 0 Q15149;D3DWL0;H0YDN1 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.4698 2 892.462872 1782.91119 66895 1.2356 0.0011027 -0.080602 -7.1935E-05 1.155 0.0010308 892.462483572214 896.469686506873 41.252 0.12302 41.252 41.184 41.307 3.8147E-06 13 8 4 0 0 0 0.0075053 1 21694 42.209 28.547 1 1.2189 1.2322 0 6881900 2718300 4163500 153 1754 72 73 226 226 AALAHSEEVTASQVAATK 18 1 0 Unmodified _AALAHSEEVTASQVAATK_ 0 0 0 Q15149;D3DWL0;H0YDN1 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.4653 2 892.462872 1782.91119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.27 1 41.27 40.77 41.77 0 0 0 0 0.017699 1 21722 42.809 34.898 1 154 1754 72 73 227 227 AALAHSEEVTASQVAATK 18 1 0 Unmodified _AALAHSEEVTASQVAATK_ 0 0 0 Q15149;D3DWL0;H0YDN1 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.4637 2 892.462872 1782.91119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.042 1 40.042 39.542 40.542 3.8147E-06 0 0 0 2.8364E-05 1 21316 71.558 56.292 1 155 1754 72 73 228 228 AALAHSEEVTASQVAATK 18 1 0 Unmodified _AALAHSEEVTASQVAATK_ 0 0 0 Q15149;D3DWL0;H0YDN1 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.3156 3 595.311007 1782.91119 78505.45 0.31549 0.00018782 0.045049 2.6818E-05 0.36054 0.00021464 595.645378852139 597.982322891651 48.325 0.40942 48.325 48.088 48.497 0 120 32 7 0 0 0 0.058755 1 23466 11.226 9.3084 1 2.5942 2.0214 0 3744900 1337500 2407500 156 1754 72 73 229 229 AALAHSEEVTASQVAATK 18 1 0 Unmodified _AALAHSEEVTASQVAATK_ 0 0 0 Q15149;D3DWL0;H0YDN1 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.9821 3 595.311007 1782.91119 78570.02 0.29047 0.00017292 -0.11031 -6.5671E-05 0.18015 0.00010725 595.310796403731 598.316538994911 48.611 0.43774 48.611 48.405 48.843 -3.8147E-06 141 37 5 0 0 0 0.03791 1 23065 16.228 16.228 1 3.0392 2.3982 0 3908600 1099800 2808900 157 1754 72 73 230 230 AALEALLPYTER 12 0 1 Unmodified _AALEALLPYTER_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.8705 2 673.86936 1345.72417 74506.84 0.79246 0.00053402 0.27142 0.0001829 1.0639 0.00071692 673.869549116881 678.873527173883 104.48 1.0021 104.48 103.9 104.91 0 528 82 10 0 0 0 5.1661E-06 2 64347 133.23 133.23 1 0.91644 1.027 0 90627000 49523000 41104000 158 1698 73 74 231;232 232 AALEALLPYTER 12 0 1 Unmodified _AALEALLPYTER_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.8754 2 673.86936 1345.72417 74148.63 0.25188 0.00016973 0.69607 0.00046906 0.94795 0.0006388 673.869919397847 678.873777489338 103.66 1.0057 103.66 103.17 104.18 0 545 85 9 0 0 0 2.8609E-05 2 65393 99.973 83.302 1 0.92388 1.0517 0 110960000 56118000 54845000 159 1698 73 74 233;234 233 AALEALLPYTER 12 0 1 Unmodified _AALEALLPYTER_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.8752 2 673.86936 1345.72417 74217.59 0.78383 0.0005282 -0.087115 -5.8704E-05 0.69672 0.0004695 673.869236268916 678.873406054477 116.11 0.82931 116.11 115.7 116.53 0 210 34 9 0 0 0 1.4704E-05 4 68004 105.86 105.86 1 1.257 1.0733 0 37968000 16164000 21804000 160 1698 73 74 235;236;237;238 237 AALEALLPYTER 12 0 1 Unmodified _AALEALLPYTER_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.8735 2 673.86936 1345.72417 74577.95 0.86964 0.00058602 -0.0022393 -1.509E-06 0.8674 0.00058451 673.869331075938 678.873455127348 115.93 1.005 115.93 115.55 116.55 0 244 47 8 0 0 0 0.00020601 2 66923 98.048 98.048 1 1.2018 1.0483 0 34913000 16445000 18468000 161 1698 73 74 239;240 239 AALEAQNALHNMK 13 1 0 Oxidation (M) _AALEAQNALHNM(ox)K_ AALEAQNALHNM(1)K AALEAQNALHNM(43.77)K 0 1 0 G5EA30;Q92879;E9PQK4;E9PSH0;E9PKU1 G5EA30 G5EA30 CELF1 CUGBP Elav-like family member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.365 2 713.859 1425.70345 NaN NaN NaN -3.2792 -0.0023409 NaN NaN NaN NaN 26.05 0.42953 26.05 25.883 26.313 0 0 0 0 0.0087242 2 11644 43.77 29.563 1 NaN NaN 0 9348400 0 9348400 162 1278 74 75 241;242 241 977 AALEEEVR 8 0 1 Unmodified _AALEEEVR_ 0 0 0 F6RY50;B4E0W3;Q96FS4 F6RY50 F6RY50 SIPA1 Signal-induced proliferation-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.7413 2 458.740357 915.46616 96306.97 0.50635 0.00023228 1.4943 0.00068549 2.0006 0.00091777 458.740497597792 463.74444302518 29.291 0.42332 29.291 29.134 29.558 0 88 32 5 0 0 0 0.0057275 1 14118 89.55 0.25411 1 1.4197 1.4037 0 15197000 5262100 9934600 163 1064 75 76 243 243 AALEEFSR 8 0 1 Unmodified _AALEEFSR_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7391 2 461.735074 921.455596 89912.73 0.22135 0.00010221 0.29677 0.00013703 0.51812 0.00023924 461.735079755414 466.739338258953 43.359 0.73234 43.359 43.126 43.858 0 199 62 6 0 0 0 0.006912 1 23127 85.212 19.96 1 0.84104 0.87043 0 37390000 19259000 18131000 164 1798 76 77 244 244 AALEEFSR 8 0 1 Unmodified _AALEEFSR_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7401 2 461.735074 921.455596 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.021 1 43.021 42.521 43.521 0 0 0 0 0.009245 1 23293 77.923 20.745 1 165 1798 76 77 245 245 AALEEFSR 8 0 1 Unmodified _AALEEFSR_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 466.739 2 461.735074 921.455596 94416.45 0.21452 9.905E-05 0.034387 1.5878E-05 0.2489 0.00011493 461.734973815128 466.739135080307 50.142 0.77884 50.142 49.597 50.375 0 188 66 5 0 0 0 0.036259 1 24459 48.756 14.752 1 1.6536 1.408 0 2832000 1361400 1470600 166 1798 76 77 246 246 AALEEVER 8 0 1 Unmodified _AALEEVER_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.7449 2 458.740357 915.46616 NaN NaN NaN 0.17988 8.252E-05 NaN NaN NaN NaN 29.729 0.3272 29.729 29.627 29.954 0 0 0 0 0.0033811 1 14464 97.798 8.2483 1 NaN NaN 0 7147800 0 7147800 167 1754 77 78 247 247 AALEEVER 8 0 1 Unmodified _AALEEVER_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.7405 2 458.740357 915.46616 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.841 1 29.841 29.341 30.341 0 0 0 0 0.0029802 1 14517 97.798 10.476 1 168 1754 77 78 248 248 AALEEVER 8 0 1 Unmodified _AALEEVER_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.7448 2 458.740357 915.46616 96306.97 0.50635 0.00023228 1.4943 0.00068549 2.0006 0.00091777 458.740497597792 463.74444302518 29.291 0.42332 29.291 29.134 29.558 0 88 32 5 0 0 0 0.0031191 1 14117 97.798 8.2483 1 1.4197 1.4037 0 15197000 5262100 9934600 169 1754 77 78 249 249 AALEEVYPDLTPEETR 16 0 1 Unmodified _AALEEVYPDLTPEETR_ 0 0 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.9534 2 916.949263 1831.88397 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.762 1 93.762 93.262 94.262 7.6294E-06 0 0 0 0.042465 1 58217 39.661 23.029 1 170 903 78 79 250 250 AALEEVYPDLTPEETRR 17 0 2 Unmodified _AALEEVYPDLTPEETRR_ 0 0 1 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.3535 3 663.668971 1987.98508 75589.42 0.60732 0.00040306 0.52508 0.00034848 1.1324 0.00075154 663.669526251606 670.675658630005 92.558 0.49433 92.558 92.352 92.846 -7.6294E-06 85 24 5 0 0 0 0.044222 1 51550 18.156 18.156 1 1.018 0.90315 0 3915700 2066300 1849400 171 903 79 80 251 251 AALEEVYPDLTPEETRR 17 0 2 Unmodified _AALEEVYPDLTPEETRR_ 0 0 1 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.0039 3 663.668971 1987.98508 75266.46 0.37246 0.00024719 0.24635 0.00016349 0.6188 0.00041068 663.669486168193 670.675729757455 92.426 0.51646 92.426 92.13 92.647 -7.6294E-06 103 24 6 0 0 0 0.00017975 1 50659 34.498 34.498 1 0.99925 0.90192 0 2834100 1564400 1269700 172 903 79 80 252 252 AALETDENLLLCAPTGAGK 19 1 0 Unmodified _AALETDENLLLCAPTGAGK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 972.993 2 972.490772 1942.96699 62023.02 0.40713 0.00039593 -0.12775 -0.00012424 0.27937 0.00027169 972.490262068257 976.498078634577 101.29 0.58315 101.29 101.03 101.61 0 261 45 8 0 0 0 1.9969E-08 2 62099 96.135 88.765 1 0.94345 0.93158 0 25319000 9798000 15521000 173 1411 80 81 253;254 254 AALETDENLLLCAPTGAGK 19 1 0 Unmodified _AALETDENLLLCAPTGAGK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 976.5008 2 972.490772 1942.96699 62082.63 0.33478 0.00032557 -0.10213 -9.9324E-05 0.23264 0.00022624 972.490461533722 976.498421294361 100.59 0.5912 100.59 100.35 100.94 0 274 47 7 0 0 0 4.6231E-17 3 63111 121.76 121.76 1 0.95617 1.0595 0 46879000 21335000 25544000 174 1411 80 81 255;256;257 256 AALETDENLLLCAPTGAGK 19 1 0 Unmodified _AALETDENLLLCAPTGAGK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 976.5007 2 972.490772 1942.96699 61439.55 0.47442 0.00046137 0.24557 0.00023882 0.71999 0.00070018 972.992728262754 976.498612434559 113.65 0.51898 113.65 113.39 113.91 0 155 24 9 0 0 0 3.0734E-05 2 66153 55.841 55.841 1 1.0932 0.87396 0 8922400 4136600 4785800 175 1411 80 81 258;259 259 AALETDENLLLCAPTGAGK 19 1 0 Unmodified _AALETDENLLLCAPTGAGK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 976.5002 2 972.490772 1942.96699 61580.68 0.19161 0.00018634 0.096215 9.3568E-05 0.28783 0.00027991 972.992441782742 976.498487436615 113.55 0.50975 113.55 113.28 113.79 7.6294E-06 160 24 9 0 0 0 3.4963E-05 2 65197 53.491 48.106 1 1.0153 0.83653 0 10699000 4719900 5979500 176 1411 80 81 260;261 261 AALFNTR 7 0 1 Unmodified _AALFNTR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 396.7214 2 396.72177 791.428987 97134.5 0.030532 1.2113E-05 0.22441 8.9028E-05 0.25494 0.00010114 396.721749525851 401.725938149376 40.203 0.62328 40.203 39.91 40.533 0 154 52 4 0 0 0 0.026488 1 20963 88.029 36.456 1 0.81366 0.84387 0 22720000 11596000 11124000 177 120 81 82 262 262 AALFNTR 7 0 1 Unmodified _AALFNTR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 396.7218 2 396.72177 791.428987 97340.89 0.19297 7.6556E-05 -0.080093 -3.1775E-05 0.11288 4.4781E-05 396.721628605859 401.725799218902 39.198 0.49098 39.198 38.937 39.428 3.8147E-06 157 42 5 0 0 0 0.011486 1 20683 108.24 43.462 1 0.83394 0.91912 0 41257000 21700000 19557000 178 120 81 82 263 263 AALGHLAGEAAAAPGPGTPCASR 23 0 1 Acetyl (Protein N-term) _(ac)AALGHLAGEAAAAPGPGTPCASR_ 1 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1078.0344 2 1073.02892 2144.04329 NaN NaN NaN -0.28825 -0.0003093 NaN NaN NaN NaN 90.444 0.33569 90.444 90.277 90.613 0 0 0 0 1.157E-09 1 55832 78.932 65.215 1 NaN NaN 0 5740100 0 5740100 179 2040 82 83 264 264 AALGHLAGEAAAAPGPGTPCASR 23 0 1 Acetyl (Protein N-term) _(ac)AALGHLAGEAAAAPGPGTPCASR_ 1 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1073.0251 2 1073.02892 2144.04329 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.336 1 90.336 89.836 90.836 -7.6294E-06 0 0 0 2.1902E-09 1 55845 76.358 63.157 1 180 2040 82 83 265 265 AALGHLAGEAAAAPGPGTPCASR 23 0 1 Acetyl (Protein N-term) _(ac)AALGHLAGEAAAAPGPGTPCASR_ 1 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1073.0286 2 1073.02892 2144.04329 59730.27 0.12901 0.00013843 0.39428 0.00042307 0.52328 0.0005615 1073.53103342801 1078.033365647 104.46 0.42233 104.46 104.25 104.67 -7.6294E-06 148 25 8 0 0 0 1.7502E-07 1 59443 55.724 55.724 1 1.0764 0.90781 0 4724300 2114300 2610000 181 2040 82 83 266 266 AALGHLAGEAAAAPGPGTPCASR 23 0 1 Acetyl (Protein N-term) _(ac)AALGHLAGEAAAAPGPGTPCASR_ 1 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1073.531 2 1073.02892 2144.04329 60064.71 -0.07016 -7.5284E-05 0.6154 0.00066034 0.54524 0.00058506 1073.53126301792 1078.53603855501 104.26 0.46718 104.26 104.05 104.52 0 162 30 7 0 0 0 2.6308E-07 1 58487 51.771 51.771 1 0.92694 0.81371 0 4163900 2591300 1572600 182 2040 82 83 267 267 AALGPLVTGLYDVQAFK 17 1 0 Unmodified _AALGPLVTGLYDVQAFK_ 0 0 0 A8K5J1;P11172;B5LY71;B5LY69;E9PFD2;B5LY67;F2Z3P2;F2Z303;F8WDG4 A8K5J1 A8K5J1 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 882.4919 2 881.990537 1761.96652 66077.5 0.86043 0.00075889 -0.25196 -0.00022223 0.60847 0.00053666 881.990311893638 885.997345630705 125.23 0.50844 125.23 124.96 125.47 0 187 33 8 0 0 0 7.9648E-05 2 81352 62.14 62.14 1 2.3826 2.5258 0 16170000 4687400 11482000 183 749 83 84 268;269 269 AALGPLVTGLYDVQAFK 17 1 0 Unmodified _AALGPLVTGLYDVQAFK_ 0 0 0 A8K5J1;P11172;B5LY71;B5LY69;E9PFD2;B5LY67;F2Z3P2;F2Z303;F8WDG4 A8K5J1 A8K5J1 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.9968 2 881.990537 1761.96652 66044.41 0.98657 0.00087015 -0.074001 -6.5268E-05 0.91257 0.00080488 881.990356138896 885.997594287833 124.79 0.50133 124.79 124.54 125.04 0 201 35 9 0 0 0 8.9602E-05 2 82950 61.11 61.11 1 2.1417 2.2748 0 20535000 6249900 14286000 184 749 83 84 270;271 270 AALLNQHYQVNFK 13 1 0 Unmodified _AALLNQHYQVNFK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.6152 3 515.94393 1544.80996 NaN NaN NaN 0.24254 0.00012514 NaN NaN NaN NaN 71.15 0.67245 71.15 70.882 71.554 0 0 0 0 0.0012159 1 41359 62.924 50.297 1 NaN NaN 0 31816000 0 31816000 185 1454 84 85 272 272 AALLNQHYQVNFK 13 1 0 Unmodified _AALLNQHYQVNFK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.6154 3 515.94393 1544.80996 84230.63 0.26507 0.00013676 0.076303 3.9368E-05 0.34137 0.00017613 516.278913335419 518.615229547259 69.495 0.60091 69.495 69.271 69.872 0 254 50 7 0 0 0 1.0121E-05 2 41307 98.156 98.156 1 2.1811 2.3715 0 39504000 12647000 26857000 186 1454 84 85 273;274 273 AALLNQHYQVNFK 13 1 0 Unmodified _AALLNQHYQVNFK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.9438 3 515.94393 1544.80996 83261.33 0.39526 0.00020393 -0.11639 -6.005E-05 0.27888 0.00014388 515.94393910785 518.615198081389 81.588 0.46156 81.588 81.378 81.839 0 118 26 8 0 0 0 0.00063665 2 44189 55.261 55.261 1 1.2327 0.97624 0 6294300 2659500 3634800 187 1454 84 85 275;276 276 AALLNQHYQVNFK 13 1 0 Unmodified _AALLNQHYQVNFK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.6155 3 515.94393 1544.80996 83755.48 0.32612 0.00016826 0.13104 6.761E-05 0.45716 0.00023587 516.278324661658 518.615391950131 81.62 0.55792 81.62 81.366 81.924 0 93 28 7 0 0 0 0.00073158 1 43360 54.005 54.005 1 1.2812 1.0002 0 3659400 1280500 2378900 188 1454 84 85 277 277 AALLSGPPGVGK 12 1 0 Unmodified _AALLSGPPGVGK_ 0 0 0 P35251 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.8171 2 533.816399 1065.61824 84397.55 0.17653 9.4232E-05 -0.08138 -4.3442E-05 0.095145 5.079E-05 533.816950766298 537.824024322344 66.322 0.7662 66.322 66.092 66.858 0 193 62 6 0 0 0 0.00021916 2 38221 82.645 66.983 1 0.45787 0.46576 0 18021000 13044000 4976300 189 1542 85 86 278;279 279 AALLSGPPGVGK 12 1 0 Unmodified _AALLSGPPGVGK_ 0 0 0 P35251 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.8253 2 533.816399 1065.61824 80882.98 0.3157 0.00016853 0.31315 0.00016716 0.62885 0.00033569 533.81683755721 537.823754693585 65.061 0.81697 65.061 64.898 65.715 -7.6294E-06 207 67 5 0 0 0 0.0002356 2 38365 73.985 63.275 1 0.52098 0.53328 0 17486000 11456000 6030400 190 1542 85 86 280;281 281 AALMESQGQQQEER 14 0 1 Oxidation (M) _AALM(ox)ESQGQQQEER_ AALM(1)ESQGQQQEER AALM(72.65)ESQGQQQEER 0 1 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.873 2 810.86775 1619.72095 69169.02 0.63841 0.00051767 -0.35663 -0.00028918 0.28178 0.00022849 810.867288590285 815.872148698957 18.457 0.17529 18.457 18.332 18.507 0 20 6 5 0 0 0 8.5613E-05 1 5405 72.652 56.02 1 1.439 1.4662 0 6955400 2359900 4595500 191 186;1747 86 87 282 282 148 AALMESQGQQQEER 14 0 1 Unmodified _AALMESQGQQQEER_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 802.8712 2 802.870293 1603.72603 68050.5 0.41131 0.00033023 -0.18097 -0.00014529 0.23034 0.00018494 802.870141156659 807.874346649505 29.111 0.36487 29.111 28.935 29.3 0 97 28 5 0 0 0 0.0025962 1 11769 48.568 45.948 1 1.9661 1.7076 0 1926400 593390 1333000 192 186;1747 86 88 283 283 AALNLPEAASYDEVR 15 0 1 Unmodified _AALNLPEAASYDEVR_ 0 0 0 O95602;B9ZVN9;B7ZKR9;B7Z8X7;B7Z284;Q53T12 O95602 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1;DNA-directed RNA polymerase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.9061 2 809.907202 1617.79985 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.366 1 88.366 87.866 88.866 0 0 0 0 0.012811 1 54505 51.286 19.689 1 193 1428 87 89 284 284 AALPGLDVLIYLK 13 1 0 Unmodified _AALPGLDVLIYLK_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.4318 2 693.423771 1384.83299 71034.02 0.67252 0.00046634 0.93203 0.00064629 1.6046 0.0011126 693.424166953267 697.431262690135 133.5 0.18929 133.5 133.44 133.63 0 13 3 6 0 0 0 0.011281 1 89776 40.727 40.727 1 1.068 1.1866 0 50123000 24713000 25410000 194 790 88 90 285 285 AALQEELQLCK 11 1 0 Unmodified _AALQEELQLCK_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8483 2 651.839745 1301.66494 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.59 1 73.59 73.09 74.09 0 0 0 0 3.3686E-06 1 43167 97.635 64.373 1 195 587 89 91 286 286 AALQEELQLCK 11 1 0 Unmodified _AALQEELQLCK_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8464 2 651.839745 1301.66494 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.709 1 73.709 73.209 74.209 0 0 0 0 1.6171E-05 1 43237 91.867 58.604 1 196 587 89 91 287 287 AALQELLSK 9 1 0 Unmodified _AALQELLSK_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7895 2 486.78985 971.565146 86489.61 0.25706 0.00012514 -0.32377 -0.00015761 -0.06671 -3.2474E-05 486.789514930326 490.796758324235 78.061 1.2071 78.061 77.592 78.8 0 408 99 6 0 0 0 0.00055371 2 46043 97.635 73.436 1 1.2179 1.4132 0 243900000 105280000 138620000 197 1649 90 92 288;289 289 AALQELLSK 9 1 0 Unmodified _AALQELLSK_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7895 2 486.78985 971.565146 86809.08 0.16825 8.1903E-05 -0.22445 -0.00010926 -0.056197 -2.7356E-05 486.78964700589 490.796768107759 76.938 1.3564 76.938 76.307 77.663 0 533 107 8 0 0 0 1.6709E-05 2 46496 121.05 94.086 1 1.2395 1.4443 0 251320000 112590000 138730000 198 1649 90 92 290;291 291 AALQELLSK 9 1 0 Unmodified _AALQELLSK_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 490.7975 2 486.78985 971.565146 87144.66 0.39855 0.00019401 0.001091 5.3111E-07 0.39964 0.00019454 486.789750768813 490.796813107279 89.113 1.1174 89.113 88.616 89.734 7.6294E-06 362 73 8 0 0 0 0.0010227 2 49172 91.069 61.692 1 0.62342 0.48915 0 16875000 10331000 6543800 199 1649 90 92 292;293 293 AALQELLSK 9 1 0 Unmodified _AALQELLSK_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 490.7968 2 486.78985 971.565146 88094.59 0.058793 2.862E-05 0.11614 5.6534E-05 0.17493 8.5154E-05 486.789818295446 490.796859843944 89.159 0.98367 89.159 88.609 89.592 0 320 62 8 0 0 0 0.00033904 2 48432 101.54 62.75 1 0.65007 0.53685 0 11948000 7743800 4204200 200 1649 90 92 294;295 295 AALRPLVK 8 1 1 Unmodified _AALRPLVK_ 0 0 1 D3YTB1;A0A024R2G7;F8W727;P62910;D3YTI8 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.2932 2 434.292362 866.570172 89901.2 -0.054617 -2.372E-05 0.28495 0.00012375 0.23033 0.00010003 434.292437755806 443.303589653688 29.622 0.49656 29.622 29.495 29.991 0 171 42 8 0 0 0 0.0051377 2 14334 124.37 88.568 1 0.8854 1.08 0 756690000 390450000 366240000 201 112 91 93 296;297 296 AALRPLVK 8 1 1 Unmodified _AALRPLVK_ 0 0 1 D3YTB1;A0A024R2G7;F8W727;P62910;D3YTI8 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.2922 2 434.292362 866.570172 89954.11 0.31338 0.0001361 0.044042 1.9127E-05 0.35743 0.00015523 434.292291563172 443.303572964556 29.142 0.42077 29.142 28.961 29.381 0 124 29 8 0 0 0 4.481E-05 2 13968 146.94 106.26 1 0.98414 1.1774 0 1102100000 602310000 499770000 202 112 91 93 298;299 299 AALRPLVK 8 1 1 Unmodified _AALRPLVK_ 0 0 1 D3YTB1;A0A024R2G7;F8W727;P62910;D3YTI8 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 434.2924 2 434.292362 866.570172 90998.23 -0.16437 -7.1384E-05 0.3487 0.00015144 0.18433 8.0054E-05 434.292424273258 443.303572586813 33.305 0.5015 33.305 32.992 33.494 0 208 43 7 0 0 0 0.039559 1 14516 83.377 65.61 1 0.79277 0.70244 0 49223000 28410000 20813000 203 112 91 93 300 300 AALRPLVK 8 1 1 Unmodified _AALRPLVK_ 0 0 1 D3YTB1;A0A024R2G7;F8W727;P62910;D3YTI8 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.3038 2 434.292362 866.570172 91588.1 -0.15511 -6.7361E-05 0.42161 0.0001831 0.26651 0.00011574 434.292465864948 443.303601431532 33.049 0.5864 33.049 32.853 33.439 0 189 44 7 0 0 0 0.022846 2 13921 94.262 78.823 1 0.80568 0.68606 0 42525000 23552000 18973000 204 112 91 93 301;302 302 AALRPLVKPK 10 2 1 Unmodified _AALRPLVKPK_ 0 0 2 D3YTB1;A0A024R2G7;F8W727;P62910;D3YTI8 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 364.9129 3 364.913243 1091.7179 98944.51 -0.046261 -1.6881E-05 -0.008071 -2.9452E-06 -0.054332 -1.9827E-05 364.913184454374 373.592109287163 24.269 0.40596 24.269 24.072 24.478 0 58 16 6 0 0 0 0.0071247 2 10010 57.55 40.78 1 0.77442 0.9988 0 32774000 18203000 14571000 205 112 92 94 303;304 304 AALRPTDVVLEVGPGTGNMTVK 22 1 1 Oxidation (M) _AALRPTDVVLEVGPGTGNM(ox)TVK_ AALRPTDVVLEVGPGTGNM(1)TVK AALRPTDVVLEVGPGTGNM(43.84)TVK 0 1 1 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2;D6RCL3 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.736 3 747.735099 2240.18347 69807.32 0.54633 0.00040851 0.65 0.00048603 1.1963 0.00089454 747.735336446453 753.743770937323 100.67 0.33859 100.67 100.53 100.87 7.6294E-06 46 22 4 0 0 0 8.8748E-06 1 57002 43.841 43.841 1 0.42398 0.35985 0 3002800 1935600 1067100 206 786 93 95 305 305 626 AALSALESFLK 11 1 0 Unmodified _AALSALESFLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.3298 2 575.329339 1148.64412 79698.06 0.80049 0.00046054 -0.076133 -4.3801E-05 0.72435 0.00041674 575.329167748122 579.336363527322 118.17 0.73024 118.17 117.79 118.52 0 244 43 8 0 0 0 2.3195E-08 2 75634 121.73 98.993 1 0.61905 0.69895 0 80483000 50123000 30360000 207 1665 94 96 306;307 306 AALSALESFLK 11 1 0 Unmodified _AALSALESFLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3372 2 575.329339 1148.64412 79835.02 0.81507 0.00046893 -0.15726 -9.0474E-05 0.65781 0.00037846 575.329155035743 579.336297095816 117.57 0.66282 117.57 117.21 117.87 7.6294E-06 238 41 7 0 0 0 6.7214E-10 2 76968 127.4 104.66 1 0.67655 0.75874 0 78473000 46859000 31614000 208 1665 94 96 308;309 308 AALSALESFLK 11 1 0 Unmodified _AALSALESFLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.3298 2 575.329339 1148.64412 80469.11 0.52336 0.0003011 0.20085 0.00011555 0.7242 0.00041666 575.329387461155 579.336461564719 130.65 0.68387 130.65 130.39 131.08 0 184 31 9 0 0 0 0.0036568 2 79081 59.426 50.243 1 0.34278 0.27789 0 25218000 19449000 5769700 209 1665 94 96 310;311 310 AALSALESFLK 11 1 0 Unmodified _AALSALESFLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.8307 2 575.329339 1148.64412 80300.88 0.86648 0.00049851 -0.094226 -5.4211E-05 0.77226 0.0004443 575.329195109836 579.336356158693 130.36 0.77687 130.36 130.11 130.88 0 151 32 9 0 0 0 0.01687 1 77986 45.598 37.555 1 0.34892 0.28026 0 15355000 11047000 4308000 210 1665 94 96 312 312 AALSASEGEEVPQDK 15 1 0 Unmodified _AALSASEGEEVPQDK_ 0 0 0 O95831;Q5RZA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.8683 2 765.867742 1529.72093 70155.07 0.87292 0.00066854 0.17465 0.00013376 1.0476 0.0008023 765.867451664285 769.875294046417 38.618 0.52252 38.618 38.431 38.953 0 229 43 8 0 0 0 1.1173E-05 2 19838 92.112 82.777 1 1.6918 1.8158 0 32700000 12735000 19965000 211 1431 95 97 313;314 314 AALSASEGEEVPQDK 15 1 0 Unmodified _AALSASEGEEVPQDK_ 0 0 0 O95831;Q5RZA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.8752 2 765.867742 1529.72093 69687.89 0.40701 0.00031171 0.11969 9.1668E-05 0.5267 0.00040338 765.867448706245 769.87477189098 37.683 0.49935 37.683 37.459 37.958 0 190 38 6 0 0 0 6.4299E-05 1 19511 84.605 84.605 1 1.4746 1.6271 0 44009000 17194000 26815000 212 1431 95 97 315 315 AALSASEGEEVPQDK 15 1 0 Unmodified _AALSASEGEEVPQDK_ 0 0 0 O95831;Q5RZA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 769.8757 2 765.867742 1529.72093 68680.49 1.0178 0.00077952 -0.58566 -0.00044853 0.43217 0.00033098 765.867298544328 769.874161593617 45.185 0.56827 45.185 44.901 45.469 0 208 39 7 0 0 0 0.00062694 2 21091 53.448 53.448 1 1.6475 1.3494 0 4949300 2031600 2917800 213 1431 95 97 316;317 316 AALSLPAK 8 1 0 Unmodified _AALSLPAK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.7492 2 385.742171 769.469789 98690.48 0.11527 4.4464E-05 -0.091807 -3.5414E-05 0.023461 9.0499E-06 385.741969034559 389.749144689139 47.149 0.5163 47.149 46.853 47.37 0 122 41 4 0 0 0 0.024726 2 26121 55.676 26.3 1 0.76476 0.77783 0 30343000 17005000 13338000 214 468 96 98 318;319 319 AALTGLLHR 9 0 1 Unmodified _AALTGLLHR_ 0 0 0 P55084;B4DY96;B5MD38;D6W539;C9JEY0;C9JE81 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 321.1986 3 317.86266 950.566149 NaN NaN NaN -0.42537 -0.00013521 NaN NaN NaN NaN 56.014 0.42325 56.014 55.79 56.213 -3.8147E-06 0 0 0 0.014892 1 31468 47.198 30.995 1 NaN NaN 0 6547700 0 6547700 215 1615 97 99 320 320 AALTGLLHR 9 0 1 Unmodified _AALTGLLHR_ 0 0 0 P55084;B4DY96;B5MD38;D6W539;C9JEY0;C9JE81 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 321.1986 3 317.86266 950.566149 109279.6 0.39088 0.00012425 0.18939 6.02E-05 0.58027 0.00018445 317.862676566866 321.198713205894 54.419 0.41655 54.419 54.232 54.648 0 97 33 4 0 0 0 0.0048273 2 31069 47.198 37.61 1 1.2378 1.2152 0 14104000 7333000 6770600 216 1615 97 99 321;322 321 AALVDLEPGTMDSVR 15 0 1 Oxidation (M) _AALVDLEPGTM(ox)DSVR_ AALVDLEPGTM(1)DSVR AALVDLEPGTM(53.57)DSVR 0 1 0 Q9BUF5;B4DP54;K7EL29;K7ESQ3;K7EQT3;K7EJ64;K7ERA8;K7EJZ4;K7EN98;K7EPE5 Q9BUF5 Q9BUF5 TUBB6 Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.3989 2 795.395612 1588.77667 68483.59 1.0185 0.00081009 -0.36649 -0.0002915 0.65198 0.00051858 795.395676431824 800.39930671334 81.056 0.49427 81.056 80.803 81.297 0 192 41 6 0 0 0 0.000301 2 49354 53.569 45.856 1 1.8832 1.8973 0 19488000 6521200 12966000 217 2004 98 100 323;324 323 1846 AAMEALVVEVTK 12 1 0 Oxidation (M) _AAM(ox)EALVVEVTK_ AAM(1)EALVVEVTK AAM(75.42)EALVVEVTK 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8446 2 638.844496 1275.67444 75261.49 0.63833 0.00040779 0.087875 5.6139E-05 0.7262 0.00046393 638.844429013415 642.851560788552 71.284 0.71152 71.284 70.981 71.692 0 285 60 7 0 0 0 8.8929E-05 2 41492 82.171 73.477 1 3.0317 3.4094 0 71148000 15834000 55313000 218 1691 99 101 325;326 326 1510 AAMEALVVEVTK 12 1 0 Oxidation (M) _AAM(ox)EALVVEVTK_ AAM(1)EALVVEVTK AAM(83.4)EALVVEVTK 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.8447 2 638.844496 1275.67444 75135.32 0.57506 0.00036737 0.023969 1.5312E-05 0.59903 0.00038268 638.844585004694 642.851545454976 69.943 0.69276 69.943 69.716 70.408 0 289 57 7 0 0 0 0.00010797 2 41650 83.397 68.723 1 3.1322 3.5024 0 107760000 26712000 81050000 219 1691 99 101 327;328 328 1510 AAMEALVVEVTK 12 1 0 Oxidation (M) _AAM(ox)EALVVEVTK_ AAM(1)EALVVEVTK AAM(58.51)EALVVEVTK 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.8531 2 638.844496 1275.67444 75390.1 0.83376 0.00053264 -0.30924 -0.00019756 0.52452 0.00033509 638.843962368045 642.85166593065 111.42 0.40337 111.42 111.21 111.62 7.6294E-06 68 18 5 0 0 0 0.0011965 1 64511 58.511 50.866 1 1.5821 1.2279 0 3543000 1774200 1768800 220 1691 99 101 329 329 1510 AAMEALVVEVTK 12 1 0 Unmodified _AAMEALVVEVTK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.8538 2 630.847039 1259.67952 76092.34 0.78332 0.00049416 -0.27904 -0.00017603 0.50428 0.00031813 630.846690855822 634.854144943736 111.45 0.49049 111.45 111.19 111.68 0 90 23 6 0 0 0 1.3083E-05 2 64558 106.62 97.186 1 2.0022 1.5785 0 5541400 1991100 3550300 221 1691 99 102 330;331 331 AAMEALVVEVTK 12 1 0 Unmodified _AAMEALVVEVTK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.8541 2 630.847039 1259.67952 76203.88 0.67919 0.00042847 -0.38491 -0.00024282 0.29428 0.00018565 630.846600790607 634.854113090107 111.26 0.46239 111.26 111.01 111.47 7.6294E-06 108 21 8 0 0 0 0.011503 2 63445 45.661 39.7 1 1.6882 1.3754 0 6714200 2401900 4312300 222 1691 99 102 332;333 332 AANAAENDFSVSQAEMSSR 19 0 1 Oxidation (M) _AANAAENDFSVSQAEM(ox)SSR_ AANAAENDFSVSQAEM(1)SSR AANAAENDFSVSQAEM(109.83)SSR 0 1 0 Q8NE71;Q2L6I2;B4DNU2;Q59F96;H0YGW7;Q5STZ8 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1005.942 2 1000.93435 1999.85415 61935.17 0.45728 0.00045771 -0.1262 -0.00012632 0.33108 0.00033139 1001.43567841433 1005.93828481132 51.364 0.5029 51.364 51.059 51.562 3.8147E-06 192 47 6 0 0 0 9.5778E-13 3 28254 109.83 109.83 1 0.86962 0.89602 0 24560000 14768000 9791200 223 1926 100 103 334;335;336 334 1756 AANAAENDFSVSQAEMSSR 19 0 1 Oxidation (M) _AANAAENDFSVSQAEM(ox)SSR_ AANAAENDFSVSQAEM(1)SSR AANAAENDFSVSQAEM(122.78)SSR 0 1 0 Q8NE71;Q2L6I2;B4DNU2;Q59F96;H0YGW7;Q5STZ8 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1001.4374 2 1000.93435 1999.85415 61077.61 0.50605 0.00050652 -0.20243 -0.00020262 0.30362 0.0003039 1001.43569735982 1005.93867139578 50.09 0.57478 50.09 49.794 50.369 0 254 51 7 0 0 0 1.5956E-17 2 28147 122.78 120.14 1 0.89169 0.92441 0 21869000 11546000 10323000 224 1926 100 103 337;338 338 1756 AANLNSIIHR 10 0 1 Unmodified _AANLNSIIHR_ 0 0 0 P39880 P39880 P39880 CUX1 Homeobox protein cut-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 373.5485 3 370.21224 1107.61489 101164.1 0.4808 0.000178 0.57624 0.00021333 1.057 0.00039133 370.212399586181 373.548507436618 49.404 0.23027 49.404 49.283 49.513 0 40 14 5 0 0 0 0.022551 1 27127 26.786 26.786 1 1.0999 1.1548 0 11142000 4932000 6209600 225 1556 101 104 339 339 AANNGALPPDLSYIVR 16 0 1 Unmodified _AANNGALPPDLSYIVR_ 0 0 0 Q8TBT6;P08574 Q8TBT6 Q8TBT6 CYC1 Cytochrome c1, heme protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.9509 2 835.946661 1669.87877 66301.86 0.80403 0.00067212 -0.78629 -0.0006573 0.017735 1.4825E-05 835.946481098264 840.950984980163 107.01 0.83633 107.01 106.45 107.29 0 256 61 7 0 0 0 0.017273 1 68213 30.059 24.452 1 1.3229 1.3208 0 16769000 8167600 8601700 226 1456 102 105 340 340 AANPVDFLSK 10 1 0 Unmodified _AANPVDFLSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.2851 2 531.284931 1060.55531 83069.33 0.6495 0.00034507 0.28256 0.00015012 0.93206 0.00049519 531.284969560931 535.292004236485 82.629 0.85749 82.629 82.154 83.012 0 372 71 8 0 0 0 0.00061895 2 49275 83.948 75.002 1 0.97884 1.1017 0 120180000 57655000 62524000 227 1898 103 106 341;342 342 AANPVDFLSK 10 1 0 Unmodified _AANPVDFLSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1061.5944 1 1061.56259 1060.55531 60198.3 0.69297 0.00073563 -0.18898 -0.00020062 0.50399 0.00053502 1061.56253391158 1069.57632327613 82.621 0.55666 82.621 82.326 82.883 0 150 45 4 0 0 0 0.027668 1 49423 52.49 39.112 1 1.2517 1.2811 0 17702000 7254800 10447000 228 1898 103 106 343 343 AANPVDFLSK 10 1 0 Unmodified _AANPVDFLSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.2852 2 531.284931 1060.55531 83459.16 0.77031 0.00040925 -0.0071188 -3.7821E-06 0.76319 0.00040547 531.284903896106 535.291875922521 81.492 0.96745 81.492 80.99 81.957 0 387 83 8 0 0 0 0.00050835 2 49730 85.731 75.021 1 0.98408 1.107 0 120220000 59166000 61053000 229 1898 103 106 344;345 345 AANPVDFLSK 10 1 0 Unmodified _AANPVDFLSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.2924 2 531.284931 1060.55531 82894.65 0.5118 0.00027191 0.1866 9.9139E-05 0.69841 0.00037105 531.284948332937 535.292003803602 94.016 0.90413 94.016 93.583 94.488 -7.6294E-06 304 59 7 0 0 0 0.024874 2 52493 44.863 44.863 1 1.2838 1.0046 0 11722000 4985700 6735900 230 1898 103 106 346;347 347 AANPVDFLSK 10 1 0 Unmodified _AANPVDFLSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.2927 2 531.284931 1060.55531 82915.94 0.58628 0.00031148 0.1796 9.5419E-05 0.76588 0.0004069 531.284922328986 535.291998131449 93.925 0.8919 93.925 93.497 94.389 -7.6294E-06 342 59 8 0 0 0 0.0038894 2 51558 62.463 53.931 1 1.2433 1.0225 0 10032000 4353200 5679000 231 1898 103 106 348;349 349 AANVLLSEQGDVK 13 1 0 Unmodified _AANVLLSEQGDVK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;C9JJV0;C9JDH9;C9J6L2;C9JCC0;C9J232;H7C279;Q5CZ67;B4E185;B4DMA5;B3KRS6;A0A0S2Z4Y2;B4DVS7;Q96BA2;A0A024R4B2;O00506 Q8NBY1 Q8NBY1 STK26;MST4;STK25;DKFZp686J1430 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3622 2 672.361899 1342.70924 75307.53 0.61909 0.00041625 0.079439 5.3412E-05 0.69853 0.00046966 672.361950635859 676.368782817047 57.631 0.64843 57.631 57.213 57.861 3.8147E-06 225 52 7 0 0 0 1.1364E-08 1 33325 141.1 130.86 1 2.0935 2.1951 0 34695000 10493000 24201000 232 1065 104 107 350 350 AANVLLSEQGDVK 13 1 0 Unmodified _AANVLLSEQGDVK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;C9JJV0;C9JDH9;C9J6L2;C9JCC0;C9J232;H7C279;Q5CZ67;B4E185;B4DMA5;B3KRS6;A0A0S2Z4Y2;B4DVS7;Q96BA2;A0A024R4B2;O00506 Q8NBY1 Q8NBY1 STK26;MST4;STK25;DKFZp686J1430 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.3708 2 672.361899 1342.70924 74928.81 0.54363 0.00036551 0.72677 0.00048865 1.2704 0.00085416 672.361966788864 676.36992339704 68.009 0.50241 68.009 67.727 68.23 0 152 31 6 0 0 0 0.013183 1 35446 38.58 29.147 1 1.2017 0.94535 0 3117600 1213200 1904400 233 1065 104 107 351 351 AANVTLLTSLVEGEAVHLAR 20 0 1 Unmodified _AANVTLLTSLVEGEAVHLAR_ 0 0 0 Q96SH1;P05549;A8K557;Q6VUC0;Q92481;B2R9E2 Q96SH1 Q96SH1 TFAP2A;TFAP2E;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.7205 3 688.719778 2063.1375 74517.16 0.58759 0.00040469 0.36242 0.0002496 0.95001 0.00065429 689.054281243698 692.055936167541 124.32 0.44405 124.32 124.15 124.59 0 122 29 8 0 0 0 7.2558E-14 1 80699 105.79 105.79 1 0.50293 0.51124 0 7382600 4507100 2875400 234 1448 105 108 352 352 AANVTLLTSLVEGEAVHLAR 20 0 1 Unmodified _AANVTLLTSLVEGEAVHLAR_ 0 0 0 Q96SH1;P05549;A8K557;Q6VUC0;Q92481;B2R9E2 Q96SH1 Q96SH1 TFAP2A;TFAP2E;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.7069 3 688.719778 2063.1375 75822.73 0.79946 0.00055061 0.0038581 2.6571E-06 0.80332 0.00055326 689.05403714074 692.055888815643 124.83 0.52691 124.83 124.59 125.12 7.6294E-06 130 36 6 0 0 0 0.0005159 1 81128 46.131 37.944 1 0.59703 0.60234 0 7760600 5195100 2565500 235 1448 105 108 353 353 AANVTLLTSLVEGEAVHLAR 20 0 1 Unmodified _AANVTLLTSLVEGEAVHLAR_ 0 0 0 Q96SH1;P05549;A8K557;Q6VUC0;Q92481;B2R9E2 Q96SH1 Q96SH1 TFAP2A;TFAP2E;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.0551 3 688.719778 2063.1375 NaN NaN NaN -0.086803 -5.9783E-05 NaN NaN NaN NaN 123.89 0.52703 123.89 123.71 124.24 0 0 0 0 1.9971E-07 1 82255 72.644 64.15 1 NaN NaN 0 3937700 3937700 0 236 1448 105 108 354 354 AANVTLLTSLVEGEAVHLAR 20 0 1 Unmodified _AANVTLLTSLVEGEAVHLAR_ 0 0 0 Q96SH1;P05549;A8K557;Q6VUC0;Q92481;B2R9E2 Q96SH1 Q96SH1 TFAP2A;TFAP2E;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.371 3 688.719778 2063.1375 76455.76 0.9398 0.00064726 0.038509 2.6522E-05 0.97831 0.00067378 688.719617461385 692.390656451677 124.33 0.59254 124.33 124.03 124.62 0 128 37 6 0 0 0 0.028728 1 82847 24.875 24.875 1 0.50849 0.50528 0 7429800 4263000 3166800 237 1448 105 108 355 355 AANVTLLTSLVEGEAVHLAR 20 0 1 Unmodified _AANVTLLTSLVEGEAVHLAR_ 0 0 0 Q96SH1;P05549;A8K557;Q6VUC0;Q92481;B2R9E2 Q96SH1 Q96SH1 TFAP2A;TFAP2E;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.7203 3 688.719778 2063.1375 NaN NaN NaN 0.91056 0.00062712 NaN NaN NaN NaN 134.57 0.15424 134.57 134.47 134.63 0 0 0 0 0.00046289 1 81359 42.705 33.541 1 NaN NaN 0 6973100 6973100 0 238 1448 105 108 356 356 AAPDILIATPGR 12 0 1 Unmodified _AAPDILIATPGR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.8473 2 597.845687 1193.67682 78588.32 0.9505 0.00056825 0.21122 0.00012627 1.1617 0.00069452 597.84585582991 602.849738162533 84.491 0.77341 84.491 84.105 84.878 0 324 60 8 0 0 0 0.00018473 2 50505 90.827 82.607 1 0.83329 0.97612 0 212250000 121920000 90329000 239 899;1099 106 109 357;358 357 AAPDILIATPGR 12 0 1 Unmodified _AAPDILIATPGR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.8496 2 597.845687 1193.67682 78140.48 0.93646 0.00055986 0.08287 4.9544E-05 1.0193 0.00060941 597.845712884416 602.849854539626 83.458 0.70079 83.458 83.135 83.836 0 258 52 8 0 0 0 9.4492E-05 2 51046 96.113 86.333 1 0.79887 0.91997 0 217630000 127200000 90426000 240 899;1099 106 109 359;360 360 AAPDILIATPGR 12 0 1 Unmodified _AAPDILIATPGR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.8462 2 597.845687 1193.67682 77796.23 0.7861 0.00046997 0.18764 0.00011218 0.97374 0.00058215 597.845775968492 602.849870039831 96.21 0.82834 96.21 95.859 96.687 -7.6294E-06 271 51 9 0 0 0 0.00018248 2 53935 75.197 66.665 1 1.0114 0.85547 0 30629000 14756000 15873000 241 899;1099 106 109 361;362 362 AAPDILIATPGR 12 0 1 Unmodified _AAPDILIATPGR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.8458 2 597.845687 1193.67682 78497.2 0.46504 0.00027802 0.33841 0.00020232 0.80345 0.00048034 597.845833835045 602.849947383822 96.051 0.82361 96.051 95.763 96.586 7.6294E-06 246 52 7 0 0 0 0.00014601 2 53004 93.096 84.875 1 1.0221 0.89156 0 28862000 13933000 14929000 242 899;1099 106 109 363;364 364 AAPDPVLEAGPVAHGPLPVPLVLDNGSFQVR 31 0 1 Unmodified _AAPDPVLEAGPVAHGPLPVPLVLDNGSFQVR_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1045.5703 3 1044.89953 3131.67677 61328.9 0.60942 0.00063678 0.4408 0.00046059 1.0502 0.0010974 1045.23412204499 1048.56984834662 128.16 0.49416 128.16 127.9 128.4 0 160 32 8 0 0 0 0.00034093 1 83492 25.054 25.054 1 0.69156 0.68797 0 8516600 4868500 3648100 243 2045 107 110 365 365 AAPEEPQQRPPEAVAAAPAGTTSSR 25 0 2 Unmodified _AAPEEPQQRPPEAVAAAPAGTTSSR_ 0 0 1 A0A0A6YYC7;A0A024R4Z4;A0A024R4Z1;Q96JP5 A0A0A6YYC7 A0A0A6YYC7 ZFP91-CNTF;hCG_2042749;ZFP91 E3 ubiquitin-protein ligase ZFP91 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.0917 3 830.417486 2488.23063 68063.72 0.51365 0.00042654 0.41491 0.00034455 0.92856 0.00077109 830.417869055183 837.424582795724 43.351 0.34483 43.351 43.189 43.534 0 89 29 5 0 0 0 6.9659E-06 2 23161 40.986 40.986 1 0.62622 0.68469 0 13178000 8635600 4542900 244 166 108 111 366;367 366 AAPEEPQQRPPEAVAAAPAGTTSSR 25 0 2 Unmodified _AAPEEPQQRPPEAVAAAPAGTTSSR_ 0 0 1 A0A0A6YYC7;A0A024R4Z4;A0A024R4Z1;Q96JP5 A0A0A6YYC7 A0A0A6YYC7 ZFP91-CNTF;hCG_2042749;ZFP91 E3 ubiquitin-protein ligase ZFP91 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.4196 3 830.417486 2488.23063 68556.75 0.91313 0.00075828 -0.1647 -0.00013677 0.74843 0.00062151 830.751527718842 837.424043560384 42.524 0.41425 42.524 42.281 42.695 3.8147E-06 118 33 6 0 0 0 2.8407E-12 3 22860 69.981 62.359 1 0.53912 0.56677 0 14031000 7527000 6504200 245 166 108 111 368;369;370 368 AAPLAAPPPAPAAPPAVAPPAGPR 24 0 1 Unmodified _AAPLAAPPPAPAAPPAVAPPAGPR_ 0 0 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1068.6063 2 1063.09947 2124.18439 59351.61 0.69395 0.00073774 0.03943 4.1919E-05 0.73338 0.00077966 1063.60081095404 1068.60509559612 95.497 0.60138 95.497 95.183 95.785 0 302 45 10 0 0 0 1.992E-11 5 57931 63.76 63.76 1 0.80737 0.87507 0 49660000 27521000 22140000 246 1861 109 112 371;372;373;374;375 373 AAPLAAPPPAPAAPPAVAPPAGPR 24 0 1 Unmodified _AAPLAAPPPAPAAPPAVAPPAGPR_ 0 0 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1068.6077 2 1063.09947 2124.18439 59576.79 0.47612 0.00050616 0.023627 2.5118E-05 0.49974 0.00053128 1063.60104903177 1068.60503117667 94.877 0.5462 94.877 94.553 95.099 0 304 45 9 0 0 0 8.5926E-12 3 58854 70.622 70.622 1 0.82379 0.94616 0 78514000 44476000 34038000 247 1861 109 112 376;377;378 377 AAPLAAPPPAPAAPPAVAPPAGPR 24 0 1 Unmodified _AAPLAAPPPAPAAPPAVAPPAGPR_ 0 0 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1063.0997 2 1063.09947 2124.18439 58683.4 0.32581 0.00034637 0.1535 0.00016318 0.47931 0.00050955 1063.60126179717 1068.60513276129 108.64 0.59406 108.64 108.31 108.9 0 217 28 11 0 0 0 3.091E-05 1 62328 37.156 37.156 1 1.4238 1.1968 0 26855000 11155000 15701000 248 1861 109 112 379 379 AAPLAAPPPAPAAPPAVAPPAGPR 24 0 1 Unmodified _AAPLAAPPPAPAAPPAVAPPAGPR_ 0 0 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1063.1002 2 1063.09947 2124.18439 58919.65 0.12943 0.00013759 0.16062 0.00017075 0.29004 0.00030835 1063.60114597994 1068.60498922208 108.46 0.56403 108.46 108.2 108.77 0 209 28 11 0 0 0 2.5386E-06 2 61316 48.532 48.532 1 1.3466 1.1747 0 26295000 11222000 15072000 249 1861 109 112 380;381 381 AAPLDSIHSLAAYYIDCIR 19 0 1 Unmodified _AAPLDSIHSLAAYYIDCIR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3669 3 717.029735 2148.06737 75011.19 1.0301 0.00073862 0.70662 0.00050667 1.7367 0.0012453 717.364082328283 720.367075129386 125.7 0.52637 125.7 125.54 126.06 0 74 36 4 0 0 0 3.1504E-05 1 81780 48.288 44.568 1 1.2265 1.2865 0 4323500 1593000 2730500 250 587 110 113 382 382 AAPLDSIHSLAAYYIDCIR 19 0 1 Unmodified _AAPLDSIHSLAAYYIDCIR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.7001 3 717.029735 2148.06737 71628.86 0.92455 0.00066293 0.14972 0.00010736 1.0743 0.00077029 717.36409237473 720.700222722425 125.24 0.58616 125.24 124.96 125.54 -7.6294E-06 111 42 5 0 0 0 0.00019013 1 83227 37.552 33.832 1 1.2444 1.2629 0 5395900 2072800 3323100 251 587 110 113 383 383 AAPPTAGSMAIEK 13 1 0 Oxidation (M) _AAPPTAGSM(ox)AIEK_ AAPPTAGSM(1)AIEK AAPPTAGSM(64.82)AIEK 0 1 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.3189 2 630.318645 1258.62274 79258.93 0.49979 0.00031503 -0.39751 -0.00025056 0.10228 6.4467E-05 630.318113225604 634.32578630799 27.491 0.44806 27.491 27.209 27.657 0 105 26 6 0 0 0 0.00015354 2 12598 64.82 49.205 1 1.802 1.8677 0 17068000 5616300 11452000 252 1412 111 114 384;385 384 1101 AAPPTAGSMAIEK 13 1 0 Oxidation (M) _AAPPTAGSM(ox)AIEK_ AAPPTAGSM(1)AIEK AAPPTAGSM(64.91)AIEK 0 1 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3273 2 630.318645 1258.62274 78813.98 0.77542 0.00048876 -0.56478 -0.00035599 0.21064 0.00013277 630.317919291903 634.325881230891 26.985 0.38316 26.985 26.822 27.205 0 84 17 6 0 0 0 0.00015268 2 12323 64.906 48.703 1 1.7738 1.8783 0 23534000 8764200 14770000 253 1412 111 114 386;387 386 1101 AAPSDGFKPR 10 1 1 Acetyl (Protein N-term) _(ac)AAPSDGFKPR_ 1 0 1 A8K6D2;Q92979;B4DQC7;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.2803 2 544.28018 1086.54581 81556.79 0.83085 0.00045221 0.022278 1.2126E-05 0.85313 0.00046434 544.280186353948 553.291340537557 37.39 0.66233 37.39 37.1 37.762 0 286 55 7 0 0 0 0.00040695 2 19009 88.921 88.921 1 1.0698 1.2906 0 137940000 63378000 74560000 254 759 112 115 388;389 388 AAPSDGFKPR 10 1 1 Acetyl (Protein N-term) _(ac)AAPSDGFKPR_ 1 0 1 A8K6D2;Q92979;B4DQC7;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.2915 2 544.28018 1086.54581 81289.07 0.86122 0.00046875 -0.050709 -2.76E-05 0.81052 0.00044115 544.28021603936 553.291392058528 36.601 0.67548 36.601 36.18 36.855 0 275 52 7 0 0 0 0.00037989 2 18697 89.698 89.698 1 1.1147 1.3181 0 170610000 81488000 89124000 255 759 112 115 390;391 390 AAQAPSSFQLLYDLK 15 1 0 Unmodified _AAQAPSSFQLLYDLK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.4459 2 826.438138 1650.86172 68962.48 0.62188 0.00051395 0.29355 0.0002426 0.91543 0.00075655 826.438265082714 830.445447277795 114.52 0.40268 114.52 114.32 114.72 0 128 28 6 0 0 0 3.0476E-05 2 72709 95.401 95.401 1 2.164 2.2042 0 14203000 4941500 9261100 256 196 113 116 392;393 392 AAQAPSSFQLLYDLK 15 1 0 Unmodified _AAQAPSSFQLLYDLK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.4456 2 826.438138 1650.86172 68679.43 0.7592 0.00062743 0.1061 8.7688E-05 0.8653 0.00071512 826.939738429462 830.445675050372 113.96 0.47707 113.96 113.73 114.21 0 162 35 7 0 0 0 0.00032702 1 74145 63.091 63.091 1 2.3037 2.3202 0 16142000 6271000 9871400 257 196 113 116 394 394 AAQAPSSFQLLYDLK 15 1 0 Unmodified _AAQAPSSFQLLYDLK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 830.4462 2 826.438138 1650.86172 67989.57 1.0921 0.00090254 0.41944 0.00034664 1.5115 0.0012492 826.437998145363 830.445390651021 126.29 0.43768 126.29 126.1 126.54 7.6294E-06 88 14 8 0 0 0 0.028321 1 76036 34.05 34.05 1 1.2 0.95145 0 4679200 2130300 2548900 258 196 113 116 395 395 AAQAPSSFQLLYDLK 15 1 0 Unmodified _AAQAPSSFQLLYDLK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 826.9419 2 826.438138 1650.86172 69158.09 0.80315 0.00066375 0.64433 0.0005325 1.4475 0.0011963 826.43867741022 830.445320024395 126.13 0.49651 126.13 125.9 126.4 0 110 21 7 0 0 0 0.0020323 1 74875 46.069 32.641 1 1.1277 0.92098 0 4719400 2238300 2481100 259 196 113 116 396 396 AAQDLCEEALR 11 0 1 Unmodified _AAQDLCEEALR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.3098 2 638.303526 1274.5925 75022.52 0.61963 0.00039552 0.59769 0.00038151 1.2173 0.00077702 638.304289976246 643.307713437567 57.387 0.38427 57.387 57.257 57.642 0 80 27 4 0 0 0 0.0019705 1 29084 63.426 52.597 1 0.68176 0.59677 0 1852600 869060 983570 260 1418 114 117 397 397 AAQDLCEEALR 11 0 1 Unmodified _AAQDLCEEALR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.3077 2 638.303526 1274.5925 74600.23 0.59371 0.00037897 -0.36328 -0.00023188 0.23043 0.00014709 638.303618114511 643.306589625481 57.872 0.67422 57.872 57.676 58.35 3.8147E-06 123 49 4 0 0 0 0.0078138 2 28784 51.927 37.26 1 0.74962 0.65159 0 1244600 688990 555580 261 1418 114 117 398;399 399 AAQDRDQIYR 10 0 2 Unmodified _AAQDRDQIYR_ 0 0 1 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.2146 3 412.542426 1234.60545 97436.96 -0.34763 -0.00014341 1.129 0.00046578 0.78141 0.00032237 412.54243340463 419.215103322598 18.672 0.7315 18.672 18.353 19.084 -1.9073E-06 169 43 8 0 0 0 4.4185E-09 2 5520 115.78 94.409 1 1.1662 1.2689 0 60700000 28376000 32324000 262 889 115 118 400;401 400 AAQDRDQIYR 10 0 2 Unmodified _AAQDRDQIYR_ 0 0 1 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.3183 2 618.31 1234.60545 76779.84 0.03307 2.0448E-05 0.27018 0.00016706 0.30326 0.00018751 618.310072045763 628.318507534113 18.661 0.46574 18.661 18.476 18.941 0 120 27 6 0 0 0 0.001873 1 5558 89.247 69.461 1 1.2263 1.333 0 44210000 20347000 23863000 263 889 115 118 402 402 AAQDRDQIYR 10 0 2 Unmodified _AAQDRDQIYR_ 0 0 1 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 419.2151 3 412.542426 1234.60545 90614.53 0.22799 9.4057E-05 0.33617 0.00013869 0.56417 0.00023274 412.541930131125 419.214887672386 18.702 0.40148 18.702 18.574 18.975 0 100 29 5 0 0 0 9.6449E-07 2 5310 100.48 86.664 1 1.2225 1.2997 0 15091000 6090100 9000700 264 889 115 118 403;404 404 AAQDRDQIYR 10 0 2 Unmodified _AAQDRDQIYR_ 0 0 1 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3184 2 618.31 1234.60545 76690.79 0.59147 0.00036571 0.00026266 1.624E-07 0.59173 0.00036587 618.310202429779 628.318304703162 18.673 0.36004 18.673 18.551 18.911 0 68 25 5 0 0 0 0.016278 1 5319 66.435 50.232 1 1.3437 1.4041 0 13488000 3995600 9492800 265 889 115 118 405 405 AAQDRDQIYR 10 0 2 Unmodified _AAQDRDQIYR_ 0 0 1 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 419.2146 3 412.542426 1234.60545 92286.63 -0.68135 -0.00028109 0.79313 0.0003272 0.11178 4.6113E-05 412.542635520632 419.214864831025 20.04 0.37851 20.04 19.892 20.27 0 104 17 8 0 0 0 0.0051929 2 5542 42.21 35.551 1 1.0189 0.85752 0 11474000 5308600 6165500 266 889 115 118 406;407 406 AAQGEPQVQFK 11 1 0 Acetyl (Protein N-term) _(ac)AAQGEPQVQFK_ 1 0 0 B5MDF5;P62826;A0A087X0W0 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.8168 2 622.817127 1243.6197 75561.81 0.52344 0.00032601 -1.0424 -0.00064924 -0.51899 -0.00032324 622.816678896784 626.823103463106 70.121 0.78824 70.121 69.733 70.521 0 255 71 7 0 0 0 0.036497 1 40740 43.083 32.559 1 2.0538 2.3137 0 74619000 23630000 50989000 267 1082 116 119 408 408 AAQGEPQVQFK 11 1 0 Acetyl (Protein N-term) _(ac)AAQGEPQVQFK_ 1 0 0 B5MDF5;P62826;A0A087X0W0 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8231 2 622.817127 1243.6197 77553 0.57695 0.00035933 -0.49176 -0.00030628 0.085185 5.3055E-05 622.817623310704 626.82352940487 69.135 0.65543 69.135 68.902 69.557 0 220 54 7 0 0 0 0.014123 1 41053 50.805 46.157 1 2.1863 2.4567 0 73872000 25723000 48150000 268 1082 116 119 409 409 AAQHGVCSVLK 11 1 0 Unmodified _AAQHGVCSVLK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.3157 2 585.308415 1168.60228 78884.55 0.4346 0.00025437 -0.16946 -9.9188E-05 0.26514 0.00015519 585.308129674042 589.315421669241 28.663 0.38686 28.663 28.548 28.935 0 91 28 4 0 0 0 0.053735 1 11566 36.318 21.057 1 1.642 1.3872 0 1971200 795030 1176200 269 907 117 120 410 410 AAQHGVCSVLK 11 1 0 Unmodified _AAQHGVCSVLK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.3086 2 585.308415 1168.60228 NaN NaN NaN 0.19809 0.00011594 NaN NaN NaN NaN 28.869 0.28847 28.869 28.705 28.993 0 0 0 0 0.046988 1 11122 45.158 13.854 1 NaN NaN 0 1700700 1700700 0 270 907 117 120 411 411 AAQIPIVATTSTPGIVR 17 0 1 Acetyl (Protein N-term) _(ac)AAQIPIVATTSTPGIVR_ 1 0 0 K7EQ79;Q6PI98;K7ELX9;K7ENM4;K7ENP7 K7EQ79 K7EQ79 INO80C INO80 complex subunit C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.5013 2 868.998894 1735.98323 69178.27 1.1865 0.0010311 -0.031631 -2.7487E-05 1.1549 0.0010036 868.998174394036 874.003536710813 123.12 0.24376 123.12 123 123.24 -7.6294E-06 59 20 5 0 0 0 0.00010244 2 79770 75.479 75.479 1 0.77441 0.81766 0 4019100 1992500 2026600 271 1345 118 121 412;413 412 AAQIPIVATTSTPGIVR 17 0 1 Acetyl (Protein N-term) _(ac)AAQIPIVATTSTPGIVR_ 1 0 0 K7EQ79;Q6PI98;K7ELX9;K7ENM4;K7ENP7 K7EQ79 K7EQ79 INO80C INO80 complex subunit C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.5015 2 868.998894 1735.98323 68647.53 0.97446 0.0008468 -0.29862 -0.0002595 0.67584 0.0005873 869.501233658764 874.002038107597 122.77 0.38889 122.77 122.6 122.99 0 73 30 6 0 0 0 0.00016005 1 81403 60.49 60.49 1 0.56632 0.59004 0 4425500 3084100 1341400 272 1345 118 121 414 414 AAQLAIR 7 0 1 Unmodified _AAQLAIR_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 371.7327 2 371.732138 741.449723 96995.22 -0.0094185 -3.5012E-06 0.25911 9.6321E-05 0.2497 9.282E-05 371.732300156248 376.736340810215 32.812 0.75882 32.812 32.443 33.201 0 340 72 7 0 0 0 0.0011966 2 16248 137.5 37.994 1 0.81746 0.96705 0 306680000 181550000 125130000 273 112 119 122 415;416 416 AAQLAIR 7 0 1 Unmodified _AAQLAIR_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 376.7361 2 371.732138 741.449723 98134.8 0.18138 6.7426E-05 -0.92563 -0.00034409 -0.74424 -0.00027666 371.732143031983 376.736157327329 32.123 0.8411 32.123 31.77 32.611 0 348 79 8 0 0 0 0.034046 1 15837 62.978 6.9524 1 0.82327 0.95136 0 255910000 147550000 108360000 274 112 119 122 417 417 AAQLAIR 7 0 1 Unmodified _AAQLAIR_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 371.7318 2 371.732138 741.449723 97850.73 -0.059739 -2.2207E-05 0.46202 0.00017175 0.40228 0.00014954 371.73217745615 376.736274644672 36.596 0.62247 36.596 36.367 36.989 0 198 55 8 0 0 0 0.011696 2 16381 107.65 19.028 1 0.74221 0.62968 0 32827000 19297000 13531000 275 112 119 122 418;419 419 AAQLAIR 7 0 1 Unmodified _AAQLAIR_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 371.7319 2 371.732138 741.449723 99161.06 -0.0059698 -2.2192E-06 0.26252 9.7589E-05 0.25655 9.537E-05 371.732118650666 376.736255376131 36.5 0.60843 36.5 36.232 36.84 0 205 53 7 0 0 0 0.026816 1 15836 74.517 5.4236 1 0.79577 0.69414 0 31961000 19244000 12717000 276 112 119 122 420 420 AAQLCGAGMAAVVDR 15 0 1 Oxidation (M) _AAQLCGAGM(ox)AAVVDR_ AAQLCGAGM(1)AAVVDR AAQLCGAGM(51.87)AAVVDR 0 1 0 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9 Q68E10 Q68E10 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.371 2 753.363592 1504.71263 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.601 1 47.601 47.101 48.101 0 0 0 0 0.0029016 1 25841 51.875 34.849 1 277 714 120 123 421 421 549 AAQVLVQELEQYQLLPK 17 1 0 Unmodified _AAQVLVQELEQYQLLPK_ 0 0 0 Q9NSI6;A5PLN2 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 989.5584 2 985.55149 1969.08843 63393.03 0.58181 0.0005734 -0.11686 -0.00011517 0.46495 0.00045823 986.052789292597 989.557703316371 124.67 0.37863 124.67 124.49 124.87 0 133 25 8 0 0 0 3.9871E-09 2 80988 105.65 105.65 1 0.88033 0.91808 0 11733000 5785600 5947300 278 2068 121 124 422;423 423 AAQVLVQELEQYQLLPK 17 1 0 Unmodified _AAQVLVQELEQYQLLPK_ 0 0 0 Q9NSI6;A5PLN2 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.5591 2 985.55149 1969.08843 62185.85 0.60671 0.00059794 0.11886 0.00011715 0.72557 0.00071509 986.053302002702 990.060061578653 124.27 0.37614 124.27 124.11 124.49 0 120 23 7 0 0 0 3.6122E-34 2 82639 154.36 154.36 1 0.8781 0.90023 0 17643000 9709900 7932800 279 2068 121 124 424;425 425 AAQVTFR 7 0 1 Unmodified _AAQVTFR_ 0 0 0 H6QX63;Q6PK04 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 401.7254 2 396.72177 791.428987 96816.6 0.028108 1.1151E-05 -0.61726 -0.00024488 -0.58915 -0.00023373 396.721543241816 401.725429353864 29.073 0.47762 29.073 28.866 29.344 -1.9073E-06 72 26 5 0 0 0 0.027156 1 13983 73.975 13.681 1 1.3111 1.3413 0 32526000 15846000 16680000 280 1307 122 125 426 426 AARPPPAASATPTAQPLPQPPAPR 24 0 2 Unmodified _AARPPPAASATPTAQPLPQPPAPR_ 0 0 1 A0A024QZH6 A0A024QZH6 A0A024QZH6 SR-A1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.7684 3 787.432631 2359.27606 70591.18 0.67537 0.00053181 0.036998 2.9133E-05 0.71237 0.00056094 787.766787816579 794.104814685786 64.841 0.22886 64.841 64.657 64.886 0 53 18 5 0 0 0 0.035897 1 38116 17.025 17.025 1 1.0755 1.0738 0 8469900 5140100 3329800 281 22 123 126 427 427 AASAAFQENVGR 12 0 1 Unmodified _AASAAFQENVGR_ 0 0 0 I3L0V3;I6L959;B4DE53;J3KR97;Q9BTW9 I3L0V3 I3L0V3 TBCD Tubulin-specific chaperone D MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.809 2 610.804551 1219.59455 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.383 1 34.383 33.883 34.883 0 0 0 0 3.7048E-07 1 17410 105.2 83.109 1 282 963 124 127 428 428 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1064.0063 2 1064.00804 2126.00152 59386.29 0.4344 0.0004622 -0.25329 -0.00026951 0.1811 0.0001927 1064.00773893215 1068.51644757737 81.608 0.69881 81.608 81.314 82.013 7.6294E-06 391 60 9 0 0 0 1.4312E-08 1 48516 76.358 76.358 1 1.0834 1.2231 0 79996000 38034000 41963000 283 1401 125 128 429 429 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1069.0186 2 1064.00804 2126.00152 59259.06 0.62956 0.00066986 -0.25335 -0.00026957 0.37621 0.00040029 1064.5095350889 1068.51590059093 85.275 0.41606 85.275 85.081 85.497 7.6294E-06 122 32 6 0 0 0 0.00061621 3 51227 35.659 35.659 1 1.0041 1.029 0 14400000 6967000 7433300 284 1401 125 128 430;431;432 432 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1064.5094 2 1064.00804 2126.00152 58639.41 0.54585 0.00058079 -0.23143 -0.00024624 0.31443 0.00033455 1064.50925419622 1068.01489359264 85.926 1.5064 85.926 85.454 86.96 0 933 119 12 0 0 0 1.1078E-137 7 51737 230.86 230.86 1 1.0351 1.2513 0 1696000000 828550000 867490000 285 1401 125 128 433;434;435;436;437;438;439 436 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1064.0059 2 1064.00804 2126.00152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.934 1 81.934 81.434 82.434 0 0 0 0 0.0042835 1 48883 44.252 35.937 1 286 1401 125 128 440 440 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.511 2 1064.00804 2126.00152 59909.4 0.48162 0.00051244 -0.26948 -0.00028673 0.21214 0.00022572 1064.50901660243 1068.51639911847 80.698 0.67279 80.698 80.428 81.101 0 365 54 9 0 0 0 3.3521E-11 4 49086 90.707 82.983 1 1.0319 1.1536 0 86975000 37095000 49880000 287 1401 125 128 441;442;443;444 443 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.5104 2 1064.00804 2126.00152 58405.58 0.69143 0.00073569 -0.27679 -0.0002945 0.41464 0.00044118 1064.50928016356 1068.01479243335 85.131 1.6366 85.131 84.269 85.906 -7.6294E-06 1007 133 12 0 0 0 9.0442E-102 3 52437 209.56 209.56 1 1.0412 1.2302 0 1308500000 624150000 684360000 288 1401 125 128 445;446;447 447 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1068.0156 2 1064.00804 2126.00152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.425 1 84.425 83.925 84.925 0 0 0 0 0.0028614 1 51843 45.864 32.727 1 289 1401 125 128 448 448 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1068.0153 2 1064.00804 2126.00152 59484.54 0.35221 0.00037476 0.21676 0.00023063 0.56897 0.00060539 1064.50994595308 1068.51681651642 97.329 0.84919 97.329 96.915 97.764 0 225 45 8 0 0 0 0.004832 1 54686 25.823 20.932 1 0.9535 0.76154 0 9166100 4571600 4594500 290 1401 125 128 449 449 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1064.5101 2 1064.00804 2126.00152 58687.29 0.20207 0.000215 -0.057378 -6.105E-05 0.14469 0.00015395 1064.50973907821 1068.51608445599 98.397 1.4407 98.397 97.877 99.318 0 788 88 13 0 0 0 1.3066E-08 1 55712 77.324 77.324 1 1.1615 1.0455 0 647620000 305790000 341830000 291 1401 125 128 450 450 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1068.5186 2 1064.00804 2126.00152 59312.72 -0.075543 -8.0379E-05 0.2133 0.00022696 0.13776 0.00014658 1064.50994192599 1068.51694537042 97.288 0.9344 97.288 96.815 97.749 -7.6294E-06 254 47 8 0 0 0 0.0044211 2 53832 26.781 26.781 1 0.94084 0.76685 0 7611400 3855300 3756100 292 1401 125 128 451;452 452 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1064.51 2 1064.00804 2126.00152 58610.88 0.19257 0.00020489 -0.24119 -0.00025663 -0.048624 -5.1737E-05 1064.50953225557 1068.5158906555 98.349 1.6858 98.349 97.794 99.48 -7.6294E-06 891 102 14 0 0 0 5.4732E-07 3 54381 53.981 53.981 1 1.1833 1.0425 0 753520000 350900000 402620000 293 1401 125 128 453;454;455 454 AASDPLLSSVSPAVSK 16 1 0 Unmodified _AASDPLLSSVSPAVSK_ 0 0 0 B4DIA5;A0A024QZ23;P19532 B4DIA5 B4DIA5 TFE3 Transcription factor E3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.922 2 764.914495 1527.81444 70216.5 0.50438 0.00038581 0.55011 0.00042078 1.0545 0.00080659 764.915108471446 768.922012516149 86.141 0.4767 86.141 85.846 86.323 0 147 39 5 0 0 0 0.00040749 2 51732 50.222 50.222 1 1.584 1.6548 0 16729000 6359900 10369000 294 9 126 129 456;457 457 AASDPLLSSVSPAVSK 16 1 0 Unmodified _AASDPLLSSVSPAVSK_ 0 0 0 B4DIA5;A0A024QZ23;P19532 B4DIA5 B4DIA5 TFE3 Transcription factor E3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.4153 2 764.914495 1527.81444 69654.12 0.66665 0.00050993 -0.38177 -0.00029202 0.28488 0.00021791 765.415297731539 768.921642097433 98.676 0.57147 98.676 98.351 98.922 -7.6294E-06 210 36 7 0 0 0 0.014033 1 55568 31.656 31.656 1 1.1769 0.93278 0 4772400 1918200 2854200 295 9 126 129 458 458 AASGLDHLK 9 1 0 Acetyl (Protein N-term) _(ac)AASGLDHLK_ 1 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.2631 2 477.256174 952.497795 NaN NaN NaN -0.34816 -0.00016616 NaN NaN NaN NaN 49.547 0.51801 49.547 49.245 49.763 0 0 0 0 0.015177 1 27281 70.332 46.311 1 NaN NaN 0 21626000 0 21626000 296 1681 127 130 459 459 AASGLDHLK 9 1 0 Acetyl (Protein N-term) _(ac)AASGLDHLK_ 1 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.2629 2 477.256174 952.497795 87833.77 0.47774 0.000228 -0.51779 -0.00024712 -0.040055 -1.9116E-05 477.25611488393 481.262964937921 48.304 0.50422 48.304 48.138 48.642 0 166 35 7 0 0 0 0.019983 1 26958 57.931 31.516 1 0.72147 0.81422 0 65631000 37621000 28010000 297 1681 127 130 460 460 AASGLDHLK 9 1 0 Acetyl (Protein N-term) _(ac)AASGLDHLK_ 1 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.2629 2 477.256174 952.497795 88165.87 0.41207 0.00019666 -0.60855 -0.00029044 -0.19648 -9.3772E-05 477.255980445847 481.2629917337 57.131 0.68704 57.131 56.731 57.418 0 243 44 8 0 0 0 0.040824 1 28196 48.283 39.42 1 1.2921 1.0579 0 5443000 2459100 2983900 298 1681 127 130 461 461 AASITSEVFNK 11 1 0 Unmodified _AASITSEVFNK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.8133 2 583.806228 1165.5979 79555.32 0.35119 0.00020503 -0.17636 -0.00010296 0.17484 0.00010207 583.806145734429 587.813165112056 65.394 1.3325 65.394 64.741 66.074 0 765 119 9 0 0 0 4.7221E-08 3 37398 117.89 98.796 1 0.69559 0.8206 0 350040000 210600000 139440000 299 2148 128 131 462;463;464 463 AASITSEVFNK 11 1 0 Unmodified _AASITSEVFNK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.8069 2 583.806228 1165.5979 79856.04 0.57665 0.00033665 -0.075275 -4.3946E-05 0.50137 0.0002927 583.806158923021 587.813357785306 64.048 1.2462 64.048 63.566 64.812 0 736 115 9 0 0 0 2.8462E-12 3 37935 138.08 112.51 1 0.70128 0.82516 0 379110000 225200000 153900000 300 2148 128 131 465;466;467 467 AASITSEVFNK 11 1 0 Unmodified _AASITSEVFNK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.8067 2 583.806228 1165.5979 79336.16 0.58648 0.00034239 0.35048 0.00020461 0.93695 0.000547 583.806491426044 587.813685198589 75.133 1.1671 75.133 74.641 75.808 0 590 85 9 0 0 0 1.8459E-05 3 39792 105.52 86.426 1 0.86306 0.72245 0 51010000 26643000 24368000 301 2148 128 131 468;469;470 468 AASITSEVFNK 11 1 0 Unmodified _AASITSEVFNK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.8065 2 583.806228 1165.5979 78980.15 0.36093 0.00021071 0.71676 0.00041845 1.0777 0.00062916 583.806707425602 587.813953350539 75.466 1.278 75.466 74.974 76.252 0 598 89 9 0 0 0 0.00018048 3 39154 93.649 69.494 1 0.84936 0.70743 0 40139000 21959000 18180000 302 2148 128 131 471;472;473 472 AASLVIMKSLEIK 13 2 0 Oxidation (M) _AASLVIM(ox)KSLEIK_ AASLVIM(1)KSLEIK AASLVIM(46)KSLEIK 0 1 1 S4R3B7;H3BNM9;B4DQT3;A0A024RCC8;Q8NG48 S4R3B7 S4R3B7 LINS;LINS1 Protein Lines homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.9216 2 709.917995 1417.82144 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.14 1 121.14 120.64 121.64 0 0 0 0 0.03427 1 78220 45.997 16.91 1 303 358 129 132 474 474 267 AASSSSPGSPVASSPSR 17 0 1 Unmodified _AASSSSPGSPVASSPSR_ 0 0 0 Q92538 Q92538 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.3743 2 766.370983 1530.72741 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.148 1 22.148 21.648 22.648 0 0 0 0 0.0057498 1 8190 49.929 36.973 1 304 1947 130 133 475 475 AASVHTVGEDTEETPHR 17 0 1 Unmodified _AASVHTVGEDTEETPHR_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.9565 3 612.622133 1834.84457 75643.76 0.12877 7.8885E-05 0.95617 0.00058577 1.0849 0.00066466 612.956427596996 615.958248096607 20.216 0.26224 20.216 20.108 20.371 0 38 8 8 0 0 0 3.7452E-35 2 6690 130.21 113.14 1 0.33495 0.34401 0 19433000 15153000 4280100 305 1965 131 134 476;477 476 AASVHTVGEDTEETPHR 17 0 1 Unmodified _AASVHTVGEDTEETPHR_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.4276 2 918.429561 1834.84457 64677.05 0.23609 0.00021683 0.075942 6.9747E-05 0.31203 0.00028658 918.429513860967 923.433759374038 20.057 0.15665 20.057 19.977 20.133 0 23 5 7 0 0 0 5.109E-34 1 6379 150.69 150.69 1 0.27722 0.27928 0 10668000 8175900 2491700 306 1965 131 134 478 478 AASVHTVGEDTEETPHR 17 0 1 Unmodified _AASVHTVGEDTEETPHR_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.9565 3 612.622133 1834.84457 NaN NaN NaN 1.1268 0.00069032 NaN NaN NaN NaN 20.056 0.34843 20.056 19.954 20.302 0 0 0 0 1.227E-106 1 6393 180.74 165.21 1 NaN NaN 0 26699000 26699000 0 307 1965 131 134 479 479 AASVHTVGEDTEETPHR 17 0 1 Unmodified _AASVHTVGEDTEETPHR_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.9589 3 612.622133 1834.84457 76300.42 0.077878 4.771E-05 0.94251 0.0005774 1.0204 0.00062511 612.957103467339 615.957677074553 22.187 0.38079 22.187 22.032 22.413 -1.9073E-06 74 13 8 0 0 0 0.00014213 2 7018 39.338 39.338 1 0.52211 0.43927 0 4489000 2844600 1644300 308 1965 131 134 480;481 481 AASVHTVGEDTEETPHR 17 0 1 Unmodified _AASVHTVGEDTEETPHR_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.6236 3 612.622133 1834.84457 77385.82 0.085045 5.2101E-05 0.37169 0.00022771 0.45674 0.00027981 612.622461966667 616.29250523337 22.109 0.27792 22.109 21.944 22.222 0 51 9 8 0 0 0 5.3296E-05 2 6504 40.515 40.515 1 0.52122 0.46088 0 3944000 2403900 1540200 309 1965 131 134 482;483 482 AASVVQPQPLVVVK 14 1 0 Unmodified _AASVVQPQPLVVVK_ 0 0 0 O60885 O60885 O60885 BRD4 Bromodomain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.9461 2 717.937576 1433.8606 73500.66 1.0524 0.00075558 -0.33769 -0.00024244 0.71474 0.00051314 717.937397144553 721.944620526301 86.405 0.41316 86.405 86.231 86.644 0 121 30 6 0 0 0 3.7373E-06 2 51995 101.65 97.973 1 0.73266 0.74371 0 13549000 7585500 5963400 310 1399 132 135 484;485 484 AATAAADFTAK 11 1 0 Unmodified _AATAAADFTAK_ 0 0 0 Q9Y3F4 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.2739 2 519.266739 1036.51892 NaN NaN NaN 0.23325 0.00012112 NaN NaN NaN NaN 32.199 0.5751 32.199 31.903 32.478 0 0 0 0 0.0070774 1 15882 62.823 35.336 1 NaN NaN 0 33674000 0 33674000 311 2136 133 136 486 486 AATAAADFTAK 11 1 0 Unmodified _AATAAADFTAK_ 0 0 0 Q9Y3F4 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.274 2 519.266739 1036.51892 83346.61 0.65405 0.00033963 0.25584 0.00013285 0.90989 0.00047248 519.266631666436 523.273753230198 31.503 0.52693 31.503 31.286 31.813 0 196 47 7 0 0 0 1.1363E-08 2 15559 123.63 88.376 1 3.0887 3.4568 0 83958000 16468000 67489000 312 2136 133 136 487;488 487 AATENIPVVR 10 0 1 Unmodified _AATENIPVVR_ 0 0 0 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.3081 2 535.303655 1068.59276 85750.7 0.45059 0.0002412 -0.3427 -0.00018345 0.10789 5.7752E-05 535.303686551868 540.307493698247 60.54 0.48952 60.54 60.268 60.758 3.8147E-06 105 36 4 0 0 0 0.056162 1 30237 35.445 28.854 1 1.7412 1.4784 0 3102400 902660 2199800 313 1851 134 137 489 489 AATFGLILDDVSLTHLTFGK 20 1 0 Unmodified _AATFGLILDDVSLTHLTFGK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3876 3 707.052645 2118.13611 71702.34 1.0798 0.00076345 -0.12861 -9.0932E-05 0.95116 0.00067252 707.386507488212 710.058227916449 133.21 0.67828 133.21 132.64 133.32 0 107 28 11 0 0 0 7.9377E-24 1 87171 129.15 129.15 1 1.5218 1.7193 0 82385000 30963000 51423000 314 730 135 138 490 490 AATFGLILDDVSLTHLTFGK 20 1 0 Unmodified _AATFGLILDDVSLTHLTFGK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.0593 3 707.052645 2118.13611 72452.11 0.89473 0.00063262 -0.11298 -7.9886E-05 0.78175 0.00055273 707.052792971459 710.058375764591 133.17 0.95389 133.17 132.35 133.3 0 171 47 11 0 0 0 2.9725E-52 3 89361 166.91 166.91 1 1.7281 1.9382 0 113870000 41482000 72392000 315 730 135 138 491;492;493 492 AATFGLILDDVSLTHLTFGK 20 1 0 Unmodified _AATFGLILDDVSLTHLTFGK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.7247 3 707.052645 2118.13611 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.31 1 132.31 131.81 132.81 0 0 0 0 0.0004772 1 88623 58.693 48.78 1 316 730 135 138 494 494 AATILTK 7 1 0 Unmodified _AATILTK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 359.2289 2 359.228897 716.44324 100393.7 0.056635 2.0345E-05 0.013139 4.7198E-06 0.069774 2.5065E-05 359.228869927092 363.235955637652 28.376 0.58176 28.376 28.119 28.7 -1.9073E-06 156 38 6 0 0 0 0.026686 2 13305 76.134 22.65 1 0.81877 0.92229 0 74495000 41800000 32695000 317 740 136 139 495;496 496 AATILTK 7 1 0 Unmodified _AATILTK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.4648 1 717.450517 716.44324 72597.2 0.61049 0.00043799 0.41645 0.00029878 1.0269 0.00073678 717.450619523591 725.464878372821 27.863 0.24254 27.863 27.737 27.98 0 36 13 4 0 0 0 0.026852 1 13066 104.45 31.409 1 1.0658 1.0821 0 16692000 8960300 7731200 318 740 136 139 497 497 AATILTK 7 1 0 Unmodified _AATILTK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 359.2288 2 359.228897 716.44324 101889.9 0.19542 7.0202E-05 0.13162 4.728E-05 0.32704 0.00011748 359.228834190905 363.235942114668 27.853 0.36979 27.853 27.706 28.076 0 74 21 6 0 0 0 0.020239 1 13087 94.262 24.83 1 0.8089 0.89614 0 46614000 24319000 22295000 319 740 136 139 498 498 AATIVATSEGSLWGLDR 17 0 1 Unmodified _AATIVATSEGSLWGLDR_ 0 0 0 A0A0S2Z472;A8KAH7;A0A024R2W3;P13861;H7C1L0 A0A0S2Z472 A0A0S2Z472 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.4534 2 873.954683 1745.89481 NaN NaN NaN -1.0341 -0.00090372 NaN NaN NaN NaN 106.64 0.11269 106.64 106.57 106.68 0 0 0 0 0.0057359 1 67932 49.448 36.248 1 NaN NaN 0 2040100 2040100 0 320 124 137 140 499 499 AATMTAAGHHAEVVVDPEDER 21 0 1 Oxidation (M) _AATM(ox)TAAGHHAEVVVDPEDER_ AATM(1)TAAGHHAEVVVDPEDER AATM(81.14)TAAGHHAEVVVDPEDER 0 1 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.014 3 741.34293 2221.00696 72661.55 0.48318 0.0003582 0.40908 0.00030326 0.89225 0.00066146 741.343141972503 744.67986080346 32.916 0.3623 32.916 32.699 33.062 0 126 36 6 0 0 0 3.7559E-09 1 16374 81.144 74.916 1 1.5038 1.5511 0 14019000 6617200 7402100 321 1724 138 141 500 500 1560 AATMTAAGHHAEVVVDPEDER 21 0 1 Unmodified _AATMTAAGHHAEVVVDPEDER_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.3463 3 736.011291 2205.01204 NaN NaN NaN -0.026317 -1.937E-05 NaN NaN NaN NaN 52.226 0.21642 52.226 52.084 52.3 0 0 0 0 0.013432 1 25793 28.765 25.799 1 NaN NaN 0 831440 831440 0 322 1724 138 142 501 501 AATSPALFNR 10 0 1 Unmodified _AATSPALFNR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.2831 2 524.282723 1046.55089 80608.32 0.18631 9.7681E-05 -1.2698 -0.00066572 -1.0835 -0.00056804 524.282491371885 529.287085513515 49.369 0.38717 49.369 49.155 49.542 0 81 31 4 0 0 0 0.00076782 2 27780 81.548 72.685 1 2.939 2.9864 0 20400000 6611700 13788000 323 1729 139 143 502;503 503 AATYMIICQISVK 13 1 0 Unmodified _AATYMIICQISVK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 753.4028 2 749.39383 1496.77311 75191.62 0.72736 0.00054508 0.31355 0.00023497 1.0409 0.00078005 749.896064758085 753.40112838808 117.41 0.24008 117.41 117.27 117.51 -7.6294E-06 30 11 4 0 0 0 0.014095 1 69168 44.188 37.948 1 1.4489 1.2328 0 1158200 573130 585110 324 897 140 144 504 504 AAVATFLQSVQVPEFTPK 18 1 0 Unmodified _AAVATFLQSVQVPEFTPK_ 0 0 0 A0A024R1A3;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 967.5268 2 967.025108 1932.03566 62424.88 0.44804 0.00043326 0.16927 0.00016369 0.61731 0.00059695 967.024988471971 971.032282368167 123.27 0.40202 123.27 123.09 123.49 -7.6294E-06 153 31 6 0 0 0 9.285E-06 2 79877 80.522 80.522 1 2.4147 2.5419 0 16437000 5385100 11051000 325 74 141 145 505;506 506 AAVATFLQSVQVPEFTPK 18 1 0 Unmodified _AAVATFLQSVQVPEFTPK_ 0 0 0 A0A024R1A3;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 967.0257 2 967.025108 1932.03566 62593.71 0.78123 0.00075547 -0.18011 -0.00017417 0.60113 0.00058131 967.024734649653 971.032023698399 122.83 0.41119 122.83 122.66 123.07 -7.6294E-06 154 30 7 0 0 0 7.2468E-05 2 81455 51.211 51.211 1 2.4351 2.5359 0 19058000 5302100 13756000 326 74 141 145 507;508 508 AAVELEEPEDAR 12 0 1 Unmodified _AAVELEEPEDAR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.8202 2 664.820064 1327.62557 71395.52 1.2475 0.00082935 1.8563 0.0012341 3.1037 0.0020634 664.81990525027 669.824655211125 49.858 0.52982 49.858 49.613 50.143 0 162 42 6 0 0 0 1.7055E-08 1 27538 121.5 94.387 1 0.92616 1.0288 0 71913000 35761000 36152000 327 1418 142 146 509 509 AAVELEEPEDAR 12 0 1 Unmodified _AAVELEEPEDAR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.8211 2 664.820064 1327.62557 NaN NaN NaN -0.21646 -0.00014391 NaN NaN NaN NaN 57.731 0.37242 57.731 57.703 58.076 0 0 0 0 0.045398 1 29307 42.338 24.17 1 NaN NaN 0 2592300 2592300 0 328 1418 142 146 510 510 AAVELPR 7 0 1 Unmodified _AAVELPR_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;Q2KJU6;Q2KJU5;Q2KJU3;A0A0C4DFM9 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 383.2286 2 378.224146 754.433738 NaN NaN NaN 0.15289 5.7828E-05 NaN NaN NaN NaN 40.854 0.27972 40.854 40.755 41.035 0 0 0 0 0.031834 1 21957 73.039 37.933 1 NaN NaN 0 3559400 0 3559400 329 11 143 147 511 511 AAVENLPTFLVELSR 15 0 1 Unmodified _AAVENLPTFLVELSR_ 0 0 0 B2RBR9;Q14974;J3QR48 B2RBR9 B2RBR9 KPNB1 Importin subunit beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.9632 2 829.959237 1657.90392 67871.52 0.88034 0.00073064 0.36826 0.00030564 1.2486 0.0010363 829.960126133138 834.963449721038 128.62 0.42143 128.62 128.37 128.79 0 137 26 7 0 0 0 2.1532E-06 2 83803 98.902 98.902 1 1.7864 1.7958 0 17316000 6340500 10975000 330 880 144 148 512;513 512 AAVENLPTFLVELSR 15 0 1 Unmodified _AAVENLPTFLVELSR_ 0 0 0 B2RBR9;Q14974;J3QR48 B2RBR9 B2RBR9 KPNB1 Importin subunit beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.9608 2 829.959237 1657.90392 68133.74 0.98623 0.00081853 0.27566 0.00022879 1.2619 0.0010473 829.959654767546 834.963495137649 128.25 0.39177 128.25 128.01 128.4 0 132 24 8 0 0 0 1.4539E-07 2 85677 109.72 109.72 1 1.8022 1.8798 0 22387000 8117000 14270000 331 880 144 148 514;515 515 AAVESLGFILFR 12 0 1 Unmodified _AAVESLGFILFR_ 0 0 0 B2R6D0;A0A087WW66;Q99460;H7C378;Q05BX4;Q05CW6 B2R6D0 B2R6D0 PSMD1 26S proteasome non-ATPase regulatory subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.8821 2 661.876988 1321.73942 NaN NaN NaN -0.25214 -0.00016689 NaN NaN NaN NaN 126.75 0.50493 126.75 126.6 127.11 7.6294E-06 0 0 0 2.3377E-08 1 82480 111.61 71.605 1 NaN NaN 0 2586300 0 2586300 332 424 145 149 516 516 AAVESLGFILFR 12 0 1 Unmodified _AAVESLGFILFR_ 0 0 0 B2R6D0;A0A087WW66;Q99460;H7C378;Q05BX4;Q05CW6 B2R6D0 B2R6D0 PSMD1 26S proteasome non-ATPase regulatory subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.8777 2 661.876988 1321.73942 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.75 1 126.75 126.25 127.25 0 0 0 0 0.00044306 1 82501 80.231 51.144 1 333 424 145 149 517 517 AAVESLGFILFR 12 0 1 Unmodified _AAVESLGFILFR_ 0 0 0 B2R6D0;A0A087WW66;Q99460;H7C378;Q05BX4;Q05CW6 B2R6D0 B2R6D0 PSMD1 26S proteasome non-ATPase regulatory subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.8824 2 661.876988 1321.73942 NaN NaN NaN -0.35435 -0.00023454 NaN NaN NaN NaN 126.25 0.56157 126.25 126.06 126.62 7.6294E-06 0 0 0 3.8903E-08 1 84133 107.15 65.045 1 NaN NaN 0 2659400 0 2659400 334 424 145 149 518 518 AAVGQESPGGLEAGNAK 17 1 0 Unmodified _AAVGQESPGGLEAGNAK_ 0 0 0 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.3955 2 778.389176 1554.7638 71696.19 0.59861 0.00046595 0.18091 0.00014082 0.77952 0.00060677 778.389563143164 782.897950761478 35.26 0.26119 35.26 35.13 35.392 0 54 22 5 0 0 0 3.5299E-06 2 17679 87.001 87.001 1 0.6697 0.67709 0 6871800 3015500 3856300 335 1270 146 150 519;520 519 AAVGQESPGGLEAGNAK 17 1 0 Unmodified _AAVGQESPGGLEAGNAK_ 0 0 0 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.3897 2 778.389176 1554.7638 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.603 1 34.603 34.103 35.103 0 0 0 0 0.034084 1 17537 40.373 25.229 1 336 1270 146 150 521 521 AAVIGDVIR 9 0 1 Unmodified _AAVIGDVIR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.2764 2 457.276909 912.539266 89149.02 0.10084 4.6111E-05 -0.014416 -6.5921E-06 0.086422 3.9519E-05 457.276892695416 462.280896996516 68.714 1.5714 68.714 67.894 69.465 7.6294E-06 561 137 8 0 0 0 0.0020622 1 39716 77.282 37.179 1 1.0254 1.1855 0 161800000 77639000 84157000 337 2065 147 151 522 522 AAVIGDVIR 9 0 1 Unmodified _AAVIGDVIR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.2769 2 457.276909 912.539266 88420.01 0.19899 9.0995E-05 -0.084013 -3.8417E-05 0.11498 5.2577E-05 457.27686166398 462.28085697615 67.496 1.1323 67.496 66.937 68.069 0 323 96 5 0 0 0 0.0051467 1 39738 67.464 35.336 1 1.0532 1.2129 0 218770000 117370000 101400000 338 2065 147 151 523 523 AAVIGDVIR 9 0 1 Unmodified _AAVIGDVIR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 457.2768 2 457.276909 912.539266 89660.66 0.23119 0.00010572 -0.040926 -1.8715E-05 0.19026 8.7002E-05 457.276838854971 462.280908273702 78.42 1.1312 78.42 77.94 79.071 0 423 70 9 0 0 0 0.014775 1 41932 55.37 34.745 1 1.149 0.97023 0 29535000 13905000 15630000 339 2065 147 151 524 524 AAVIGDVIR 9 0 1 Unmodified _AAVIGDVIR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 457.2768 2 457.276909 912.539266 89665.34 0.07317 3.3459E-05 0.11397 5.2118E-05 0.18714 8.5576E-05 457.276903059656 462.280974533708 78.547 1.3631 78.547 78.082 79.445 0 455 86 10 0 0 0 0.046953 1 41157 39.253 25.674 1 1.1268 0.98291 0 27934000 12980000 14954000 340 2065 147 151 525 525 AAVIGPDVFAK 11 1 0 Unmodified _AAVIGPDVFAK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.3115 2 544.310949 1086.60735 82347.98 0.48302 0.00026291 0.23047 0.00012545 0.71349 0.00038836 544.311197997488 548.317999149704 84.468 0.48735 84.468 84.212 84.7 -7.6294E-06 190 39 6 0 0 0 0.0058056 1 51812 55.549 43.781 1 1.5943 1.714 0 37560000 15722000 21838000 341 397;1622 148 152 526 526 AAVIGPDVFAK 11 1 0 Unmodified _AAVIGPDVFAK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.3174 2 544.310949 1086.60735 82007.75 0.37411 0.00020363 0.81596 0.00044413 1.1901 0.00064777 544.813018834071 548.82025612167 97.38 0.60751 97.38 97.055 97.663 7.6294E-06 109 30 5 0 0 0 0.026424 1 53904 40.724 31.861 1 2.6233 2.1286 0 2828800 736590 2092300 342 397;1622 148 152 527 527 AAVLFATDIAAR 12 0 1 Unmodified _AAVLFATDIAAR_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8502 2 609.845687 1217.67682 NaN NaN NaN -1.3174 -0.0008034 NaN NaN NaN NaN 94.547 0.35231 94.547 94.458 94.811 -7.6294E-06 0 0 0 0.041011 1 57420 43.512 16.397 1 NaN NaN 0 7406300 0 7406300 343 1708 149 153 528 528 AAVLFATDIAAR 12 0 1 Unmodified _AAVLFATDIAAR_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.8493 2 609.845687 1217.67682 NaN NaN NaN -0.32003 -0.00019517 NaN NaN NaN NaN 93.712 0.6956 93.712 93.467 94.163 0 0 0 0 0.0066597 1 58125 59.931 8.8646 1 NaN NaN 0 11742000 0 11742000 344 1708 149 153 529 529 AAVLFATDIAAR 12 0 1 Unmodified _AAVLFATDIAAR_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.3522 2 609.845687 1217.67682 79171.61 0.56386 0.00034386 0.40677 0.00024807 0.97063 0.00059193 609.845698092065 614.849506547433 107.67 0.51811 107.67 107.43 107.94 0 114 29 5 0 0 0 0.046405 1 61630 33.229 4.5019 1 0.81087 0.67739 0 3308800 1567800 1741000 345 1708 149 153 530 530 AAVLLEQER 9 0 1 Unmodified _AAVLLEQER_ 0 0 0 Q13435;Q7Z3K9;E9PJ04;H0YCG1;E9PJT3 Q13435 Q13435 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7938 2 514.790381 1027.56621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.483 1 44.483 43.983 44.983 0 0 0 0 0.035184 1 24300 51.346 12.554 1 346 1713 150 154 531 531 AAVLYVMDLSEQCGHGLR 18 0 1 Oxidation (M) _AAVLYVM(ox)DLSEQCGHGLR_ AAVLYVM(1)DLSEQCGHGLR AAVLYVM(58.43)DLSEQCGHGLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.6643 3 678.996037 2033.96628 74996.72 0.33826 0.00022968 -0.89625 -0.00060855 -0.55799 -0.00037887 679.664548752262 682.665831852301 81.285 0.62839 81.285 80.927 81.555 0 232 53 6 0 0 0 1.2353E-05 1 48525 58.427 58.427 1 1.1367 1.1652 0 19228000 8306700 10922000 347 1183 151 155 532 532 893 AAVLYVMDLSEQCGHGLR 18 0 1 Oxidation (M) _AAVLYVM(ox)DLSEQCGHGLR_ AAVLYVM(1)DLSEQCGHGLR AAVLYVM(40.8)DLSEQCGHGLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.9962 3 678.996037 2033.96628 73792.75 0.81759 0.00055514 -0.9533 -0.00064729 -0.13571 -9.2144E-05 679.329903745172 682.666229633633 81.916 0.67274 81.916 81.594 82.267 0 230 57 7 0 0 0 0.00020015 1 48807 40.798 40.798 1 1.6084 1.675 0 21753000 8315000 13438000 348 1183 151 155 533 533 893 AAVLYVMDLSEQCGHGLR 18 0 1 Oxidation (M) _AAVLYVM(ox)DLSEQCGHGLR_ AAVLYVM(1)DLSEQCGHGLR AAVLYVM(60.31)DLSEQCGHGLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3311 3 678.996037 2033.96628 73185.59 0.51809 0.00035178 -0.32606 -0.00022139 0.19203 0.00013039 679.330375907137 682.666190505309 80.678 0.62838 80.678 80.374 81.002 0 199 50 6 0 0 0 1.0788E-05 1 49265 60.307 57.02 1 1.5104 1.6722 0 42284000 18447000 23837000 349 1183 151 155 534 534 893 AAVQFLNNAWGIQK 14 1 0 Unmodified _AAVQFLNNAWGIQK_ 0 0 0 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.421 2 780.420082 1558.82561 70273.21 0.627 0.00048932 -0.016868 -1.3164E-05 0.61013 0.00047616 780.92152718137 784.42726704107 104.14 0.77486 104.14 103.81 104.58 7.6294E-06 316 64 8 0 0 0 0.00013596 1 64367 79.148 79.148 1 0.6813 0.69135 0 27782000 17313000 10469000 350 30 152 156 535 535 AAVQFLNNAWGIQK 14 1 0 Unmodified _AAVQFLNNAWGIQK_ 0 0 0 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.4224 2 780.420082 1558.82561 70110.39 0.44592 0.000348 0.25586 0.00019968 0.70178 0.00054768 780.420304720145 784.427259418134 103.38 0.68015 103.38 103.07 103.75 0 321 56 8 0 0 0 6.4527E-10 1 65394 122.96 122.96 1 0.6981 0.77275 0 45649000 26645000 19004000 351 30 152 156 536 536 AAVQFLNNAWGIQK 14 1 0 Unmodified _AAVQFLNNAWGIQK_ 0 0 0 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.4207 2 780.420082 1558.82561 68847.15 1.1722 0.00091484 0.87943 0.00068633 2.0517 0.0016012 780.420273030891 784.427529291338 115.78 0.43958 115.78 115.58 116.02 0 100 18 8 0 0 0 0.032598 1 67913 30.392 30.392 1 0.96998 0.77615 0 8720300 4366900 4353300 352 30 152 156 537 537 AAVQFLNNAWGIQK 14 1 0 Unmodified _AAVQFLNNAWGIQK_ 0 0 0 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.9225 2 780.420082 1558.82561 69206.1 0.79402 0.00061967 0.22301 0.00017404 1.017 0.00079371 780.420088245052 784.427036743269 115.66 0.49268 115.66 115.41 115.9 -7.6294E-06 110 22 8 0 0 0 0.002133 1 66790 49.35 49.35 1 1.0234 0.83272 0 7147500 3827500 3319900 353 30 152 156 538 538 AAVTSLFAK 9 1 0 Unmodified _AAVTSLFAK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.2669 2 454.26601 906.517468 NaN NaN NaN 0.023639 1.0739E-05 NaN NaN NaN NaN 70.534 0.95395 70.534 70.027 70.981 0 0 0 0 0.020367 1 40809 58.596 36.465 1 NaN NaN 0 35328000 35328000 0 + 354 1172 153 157 539 539 AAVTSLFAK 9 1 0 Unmodified _AAVTSLFAK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.267 2 454.26601 906.517468 NaN NaN NaN 0.084226 3.8261E-05 NaN NaN NaN NaN 69.143 0.96563 69.143 68.681 69.647 0 0 0 0 0.0021498 1 40934 82.241 50.286 1 NaN NaN 0 39686000 39686000 0 + 355 1172 153 157 540 540 AAVWEITGAEFSK 13 1 0 Unmodified _AAVWEITGAEFSK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.8599 2 704.858992 1407.70343 73688.46 0.68277 0.00048126 0.3842 0.00027081 1.067 0.00075207 704.859279995933 708.866184401875 100.54 0.721 100.54 100.31 101.03 0 131 53 4 0 0 0 0.00012053 1 61639 77.062 71.101 1 0.45377 0.47079 0 12560000 7510300 5049200 356 1589 154 158 541 541 AAVWEITGAEFSK 13 1 0 Unmodified _AAVWEITGAEFSK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.8588 2 704.858992 1407.70343 72045.1 0.74191 0.00052294 0.1558 0.00010982 0.89771 0.00063276 704.858996359025 708.866059620041 99.903 0.62029 99.903 99.539 100.16 0 144 47 4 0 0 0 0.00011207 3 62696 74.944 61.67 1 0.56008 0.58284 0 11100000 6996000 4104200 357 1589 154 158 542;543;544 544 AAVWEITGAEFSK 13 1 0 Unmodified _AAVWEITGAEFSK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.8596 2 704.858992 1407.70343 72225.18 1.0235 0.00072144 0.88313 0.00062248 1.9067 0.0013439 704.85928993991 709.368342689308 112.95 0.47208 112.95 112.68 113.15 0 79 20 7 0 0 0 0.042525 1 65697 30.872 28.359 1 1.037 0.80952 0 3790300 1697000 2093300 358 1589 154 158 545 545 AAWEAYLSR 9 0 1 Unmodified _AAWEAYLSR_ 0 0 0 A8K5J1;P11172;B5LY69;B5LY70;B5LY64 A8K5J1 A8K5J1 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase;Orotidine 5-phosphate decarboxylase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.7744 2 533.769448 1065.52434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.482 1 80.482 79.982 80.982 0 0 0 0 0.0040489 1 47857 69.423 52.038 1 359 749 155 159 546 546 AAYEAELGDAR 11 0 1 Unmodified _AAYEAELGDAR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.2822 2 583.277835 1164.54112 78241.62 0.6118 0.00035685 0.096916 5.6529E-05 0.70872 0.00041338 583.277897039798 588.281967263995 42.03 0.71872 42.03 41.726 42.444 0 280 52 8 0 0 0 7.9598E-08 2 22112 112.71 100.12 1 1.1356 1.3436 0 313800000 149220000 164580000 360 1440 156 160 547;548 547 AAYEAELGDAR 11 0 1 Unmodified _AAYEAELGDAR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.2781 2 583.277835 1164.54112 79403.01 0.82063 0.00047865 0.089198 5.2027E-05 0.90983 0.00053068 583.277895187829 588.281949680307 41.212 0.94354 41.212 40.677 41.621 0 402 75 8 0 0 0 0.0004048 2 22094 81.099 71.682 1 1.1968 1.3618 0 126520000 59297000 67224000 361 1440 156 160 549;550 550 AAYEAELGDAR 11 0 1 Unmodified _AAYEAELGDAR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.2816 2 583.277835 1164.54112 79501.59 0.36625 0.00021363 0.31382 0.00018304 0.68007 0.00039667 583.278000576119 588.282048293484 48.91 0.6111 48.91 48.581 49.192 0 216 47 6 0 0 0 0.021359 1 23770 43.308 39.561 1 1.4144 1.1581 0 13116000 4842400 8273200 362 1440 156 160 551 551 AAYEAELGDAR 11 0 1 Unmodified _AAYEAELGDAR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.278 2 583.277835 1164.54112 78898.97 0.1898 0.00011071 0.15498 9.0399E-05 0.34479 0.00020111 583.27793615436 588.281985023334 49.323 0.63164 49.323 49.021 49.653 0 242 48 8 0 0 0 0.02141 2 23416 43.282 39.536 1 1.3347 1.088 0 12708000 5779700 6928300 363 1440 156 160 552;553 552 AAYEAELGDARK 12 1 1 Unmodified _AAYEAELGDARK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 437.8946 3 431.88597 1292.63608 91548.27 0.36396 0.00015719 0.0084237 3.6381E-06 0.37238 0.00016083 431.885890164108 437.893391149608 28.648 0.30389 28.648 28.525 28.829 1.9073E-06 78 16 7 0 0 0 0.0077409 1 13651 35.774 29.741 1 1.1788 1.3923 0 37369000 17992000 19377000 364 1440 157 161 554 554 AAYEAELGDARK 12 1 1 Unmodified _AAYEAELGDARK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.337 2 647.325316 1292.63608 NaN NaN NaN -0.01941 -1.2564E-05 NaN NaN NaN NaN 28.624 0.30648 28.624 28.469 28.776 0 0 0 0 4.4474E-20 1 13638 137.98 116.6 1 NaN NaN 0 29687000 0 29687000 365 1440 157 161 555 555 AAYEAELGDARK 12 1 1 Unmodified _AAYEAELGDARK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.3367 2 647.325316 1292.63608 74347.27 0.64779 0.00041933 0.33509 0.00021691 0.98288 0.00063625 647.325392290615 656.336667952785 27.881 0.28832 27.881 27.737 28.025 0 87 16 8 0 0 0 1.1073E-08 2 13093 143.89 136.83 1 1.3506 1.5796 0 51100000 19458000 31643000 366 1440 157 161 556;557 556 AAYEAELGDARK 12 1 1 Unmodified _AAYEAELGDARK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 437.8934 3 431.88597 1292.63608 91401.55 -0.38895 -0.00016798 0.30292 0.00013083 -0.086027 -3.7154E-05 431.88602324233 437.89359158426 32.64 0.30237 32.64 32.494 32.796 0 84 15 8 0 0 0 0.0086123 2 14100 35.204 33.146 1 1.3352 1.1423 0 10310000 4513900 5795800 367 1440 157 161 558;559 558 AAYEAELGDARK 12 1 1 Unmodified _AAYEAELGDARK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.3373 2 647.325316 1292.63608 NaN NaN NaN -0.15775 -0.00010212 NaN NaN NaN NaN 32.651 0.26375 32.651 32.532 32.796 0 0 0 0 3.8192E-08 1 14114 107.55 90.119 1 NaN NaN 0 9572200 0 9572200 368 1440 157 161 560 560 AAYEAELGDARK 12 1 1 Unmodified _AAYEAELGDARK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 437.8935 3 431.88597 1292.63608 91679.28 -0.18051 -7.7961E-05 0.29218 0.00012619 0.11167 4.8228E-05 431.886139385143 437.893497864612 32.755 0.28485 32.755 32.618 32.902 0 53 11 8 0 0 0 0.0046249 2 13738 40.767 40.767 1 1.5091 1.2657 0 6338400 2615500 3722900 369 1440 157 161 561;562 562 AAYEAELGDARK 12 1 1 Unmodified _AAYEAELGDARK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.3372 2 647.325316 1292.63608 NaN NaN NaN -0.54311 -0.00035157 NaN NaN NaN NaN 32.755 0.30038 32.755 32.578 32.878 -3.8147E-06 0 0 0 3.0794E-05 1 13718 98.943 87.349 1 NaN NaN 0 5478700 0 5478700 370 1440 157 161 563 563 AAYLNMSEDPSHPSMALNTR 20 0 1 2 Oxidation (M) _AAYLNM(ox)SEDPSHPSM(ox)ALNTR_ AAYLNM(1)SEDPSHPSM(1)ALNTR AAYLNM(43.53)SEDPSHPSM(43.53)ALNTR 0 2 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.6732 3 746.336899 2235.98887 69427.8 0.76597 0.00057167 -0.19403 -0.00014481 0.57194 0.00042686 746.67141833463 750.007131490377 48.231 0.35223 48.231 48.003 48.356 0 118 29 6 0 0 0 4.6662E-05 1 26196 43.534 38.917 1 1.2943 1.3241 0 33244000 15861000 17383000 371 515 158 162 564 564 362;363 AAYLNMSEDPSHPSMALNTR 20 0 1 2 Oxidation (M) _AAYLNM(ox)SEDPSHPSM(ox)ALNTR_ AAYLNM(1)SEDPSHPSM(1)ALNTR AAYLNM(62)SEDPSHPSM(62)ALNTR 0 2 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.6718 3 746.336899 2235.98887 69801.12 0.57833 0.00043163 -0.12785 -9.5416E-05 0.45048 0.00033621 746.671153227831 750.007310293892 47.214 0.90249 47.214 46.756 47.659 0 424 70 8 0 0 0 1.3951E-06 2 26264 62.002 60.995 1 1.1811 1.3741 0 60238000 23112000 37126000 372 515 158 162 565;566 566 362;363 AAYLSDPR 8 0 1 Unmodified _AAYLSDPR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 446.7293 2 446.729792 891.445031 NaN NaN NaN -0.65559 -0.00029287 NaN NaN NaN NaN 35.147 0.62326 35.147 34.671 35.295 0 0 0 0 0.030565 1 15130 58.917 46.561 1 NaN NaN 0 3497300 3497300 0 373 1665 159 163 567 567 AAYPDLENPPLLVTPSQQAK 20 1 0 Unmodified _AAYPDLENPPLLVTPSQQAK_ 0 0 0 P54136;E5RJM9 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1080.5769 2 1076.56787 2151.12118 59099.27 0.44174 0.00047556 0.28601 0.00030791 0.72775 0.00078347 1077.06929160511 1081.07646835274 108.83 0.38388 108.83 108.62 109 -7.6294E-06 121 23 7 0 0 0 0.0004921 3 67907 36.445 36.445 1 1.6006 1.5689 0 20915000 8326500 12588000 374 1609 160 164 568;569;570 568 AAYPDLENPPLLVTPSQQAK 20 1 0 Unmodified _AAYPDLENPPLLVTPSQQAK_ 0 0 0 P54136;E5RJM9 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1076.5609 2 1076.56787 2151.12118 58790.68 0.22429 0.00024146 0.2912 0.00031349 0.51549 0.00055496 1077.06977728787 1081.07691853522 119.88 0.37834 119.88 119.69 120.07 0 119 18 9 0 0 0 0.017644 1 71001 23.419 23.419 1 1.0072 0.80204 0 6724300 3772700 2951600 375 1609 160 164 571 571 AAYPDLENPPLLVTPSQQAK 20 1 0 Unmodified _AAYPDLENPPLLVTPSQQAK_ 0 0 0 P54136;E5RJM9 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1080.5752 2 1076.56787 2151.12118 59338.16 0.19096 0.00020558 0.1348 0.00014512 0.32576 0.0003507 1077.06952398112 1081.07632210189 119.74 0.37583 119.74 119.51 119.89 -7.6294E-06 102 16 8 0 0 0 0.0032231 1 69979 31.827 31.827 1 0.94516 0.76912 0 7165900 3996400 3169500 376 1609 160 164 572 572 ACARPLISVYSEK 13 1 1 Acetyl (Protein N-term) _(ac)ACARPLISVYSEK_ 1 0 1 P36578;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.4091 2 768.397958 1534.78136 69851.47 0.87127 0.00066948 0.14132 0.00010859 1.0126 0.00077807 768.397405367782 777.408284337931 95.62 0.62301 95.62 95.266 95.889 0 219 43 8 0 0 0 0.001887 2 53522 56.936 36.159 1 1.2166 1.0065 0 3971700 1568600 2403100 377 1548 161 165 573;574 574 ACAVETSVDLSEISSK 16 1 0 Unmodified _ACAVETSVDLSEISSK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.4166 2 848.408917 1694.80328 65994.09 0.89482 0.00075917 -0.20742 -0.00017598 0.6874 0.0005832 848.910311807548 852.416088455711 81.815 0.46626 81.815 81.666 82.132 0 106 39 5 0 0 0 1.4847E-08 3 48763 104.24 104.24 1 0.57131 0.58297 0 17858000 11551000 6307500 378 1233 162 166 575;576;577 576 ACAVETSVDLSEISSK 16 1 0 Unmodified _ACAVETSVDLSEISSK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 852.4166 2 848.408917 1694.80328 65663.15 0.71747 0.0006087 0.77136 0.00065443 1.4888 0.0012631 848.912907517995 852.415621981374 93.813 0.99099 93.813 93.247 94.238 0 338 66 7 0 0 0 0.00010618 2 51623 78.964 78.964 1 1.1381 0.91427 0 15673000 6024200 9648700 379 1233 162 166 578;579 578 ACFCLLEGDK 10 1 0 Unmodified _ACFCLLEGDK_ 0 0 0 A8K6X9;Q6PD62;H0YCE8 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.7804 2 606.773016 1211.53148 76485.4 0.57645 0.00034978 0.38262 0.00023216 0.95907 0.00058194 606.773161583275 610.780227010625 78.051 0.40843 78.051 77.702 78.111 0 90 31 4 0 0 0 0.043564 1 46205 37.344 33.184 1 1.6951 1.7278 0 10400000 4170800 6229400 380 765 163 167 580 580 ACFSANGEEVLATSTHSK 18 1 0 Unmodified _ACFSANGEEVLATSTHSK_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.9639 3 636.96339 1907.86834 76017.04 0.62405 0.00039749 -0.24013 -0.00015296 0.38391 0.00024454 637.297584938168 639.634521408841 56.746 0.54097 56.746 56.55 57.091 0 319 50 8 0 0 0 1.2602E-22 2 31949 126.84 126.84 1 0.79523 0.85877 0 42205000 21070000 21135000 381 876 164 168 581;582 582 ACFSANGEEVLATSTHSK 18 1 0 Unmodified _ACFSANGEEVLATSTHSK_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.2974 3 636.96339 1907.86834 76128.71 0.38411 0.00024467 -0.012272 -7.817E-06 0.37184 0.00023685 636.96354238754 639.634790538071 55.673 0.50455 55.673 55.429 55.934 0 217 38 8 0 0 0 6.5946E-23 2 31902 132.13 130.31 1 0.80986 0.91089 0 71965000 45124000 26841000 382 876 164 168 583;584 584 ACFSANGEEVLATSTHSK 18 1 0 Unmodified _ACFSANGEEVLATSTHSK_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.6354 3 636.96339 1907.86834 74918.69 0.61179 0.00038969 -0.15687 -9.992E-05 0.45492 0.00028977 636.963457275051 639.634760969075 66.741 0.67912 66.741 66.439 67.118 0 271 42 11 0 0 0 3.0289E-08 2 34620 89.846 89.846 1 1.3853 1.1038 0 19752000 8432000 11320000 383 876 164 168 585;586 585 ACFSANGEEVLATSTHSK 18 1 0 Unmodified _ACFSANGEEVLATSTHSK_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.6353 3 636.96339 1907.86834 75949.76 0.50176 0.0003196 -0.11055 -7.0415E-05 0.39121 0.00024919 636.963449099619 639.634837816598 67.236 0.65479 67.236 66.994 67.649 0 224 38 10 0 0 0 3.9956E-05 2 34156 48.907 48.907 1 1.4261 1.1459 0 16201000 6665500 9535500 384 876 164 168 587;588 587 ACGDSTLTQITAGLDPVGR 19 0 1 Unmodified _ACGDSTLTQITAGLDPVGR_ 0 0 0 C9JIS1;C9JXA5;Q6FHM2;P62879;C9JZN1 C9JIS1 C9JIS1 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 971.4846 2 966.478196 1930.94184 62124.88 0.20945 0.00020243 0.73172 0.00070719 0.94117 0.00090962 966.478340890635 971.985255443907 121.63 0.24197 121.63 121.48 121.73 0 53 12 6 0 0 0 0.00045503 1 72412 40.941 40.941 1 1.4133 1.1815 0 3522900 1591700 1931200 385 1135 165 169 589 589 ACGDSTLTQITAGLDPVGR 19 0 1 Unmodified _ACGDSTLTQITAGLDPVGR_ 0 0 0 C9JIS1;C9JXA5;Q6FHM2;P62879;C9JZN1 C9JIS1 C9JIS1 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 971.4805 2 966.478196 1930.94184 NaN NaN NaN -1.9675 -0.0019016 NaN NaN NaN NaN 121.45 0.35182 121.45 121.23 121.58 0 0 0 0 0.012096 1 71388 39.509 33.537 1 NaN NaN 0 1319000 0 1319000 386 1135 165 169 590 590 ACGGPGNFCPSFSELQR 17 0 1 Unmodified _ACGGPGNFCPSFSELQR_ 0 0 0 B3KN79;Q15646;H0YGP3 B3KN79 B3KN79 OASL 2-5-oligoadenylate synthase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 942.4145 2 942.411802 1882.80905 63821.52 0.43323 0.00040828 0.25171 0.00023722 0.68494 0.0006455 942.41138106139 947.917376101023 101.34 0.38271 101.34 101.21 101.59 0 89 25 6 0 0 0 0.021631 1 57404 31.228 31.228 1 0.9418 0.81487 0 2608200 1446500 1161700 387 911 166 170 591 591 ACGLVASNLNLKPGECLR 18 1 1 Acetyl (Protein N-term) _(ac)ACGLVASNLNLKPGECLR_ 1 0 1 P09382;F8WEI7 P09382 P09382 LGALS1 Galectin-1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1016.5259 2 1007.51406 2013.01356 NaN NaN NaN -0.79395 -0.00079992 NaN NaN NaN NaN 117.01 0.46628 117.01 116.8 117.27 7.6294E-06 0 0 0 4.7242E-06 1 68824 69.716 50.393 1 NaN NaN 0 3371300 0 3371300 388 1460 167 171 592 592 ACGNFGIPCELR 12 0 1 Unmodified _ACGNFGIPCELR_ 0 0 0 E9PBS1;A0A024RD93;P22234;D6RF62 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3266 2 697.321196 1392.62784 75224.9 0.85228 0.00059431 -0.78166 -0.00054507 0.070619 4.9244E-05 697.32114152872 702.32523546676 83.031 0.41969 83.031 82.816 83.236 0 93 36 5 0 0 0 0.0057331 1 49644 50.194 42.269 1 1.0144 1.0656 0 11193000 6430800 4762300 389 380 168 172 593 593 ACGVSRPVIACSVTIK 16 1 1 Unmodified _ACGVSRPVIACSVTIK_ 0 0 1 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.3087 3 573.307775 1716.9015 78333.86 0.6958 0.00039891 -0.62248 -0.00035687 0.073313 4.2031E-05 573.307663244623 579.315189239928 64.022 0.88667 64.022 63.565 64.452 0 412 80 8 0 0 0 0.00066447 2 36652 42.708 42.708 1 0.67969 0.8162 0 66814000 38492000 28321000 390 812 169 173 594;595 595 ACGVSRPVIACSVTIK 16 1 1 Unmodified _ACGVSRPVIACSVTIK_ 0 0 1 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.6426 3 573.307775 1716.9015 78433.6 0.63415 0.00036356 -0.56926 -0.00032636 0.064897 3.7206E-05 573.307395161566 579.31510103188 62.212 0.7132 62.212 61.94 62.654 3.8147E-06 366 65 8 0 0 0 0.00014038 2 36450 45.438 39.895 1 0.68705 0.80882 0 84400000 49191000 35209000 391 812 169 173 596;597 596 ACGVSRPVIACSVTIK 16 1 1 Unmodified _ACGVSRPVIACSVTIK_ 0 0 1 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.3156 3 573.307775 1716.9015 77842.93 0.52016 0.00029821 -0.30009 -0.00017205 0.22007 0.00012617 573.642100397138 579.315367320112 73.435 0.65971 73.435 73.168 73.827 0 406 50 11 0 0 0 1.6805E-06 2 38788 70.96 70.96 1 0.88705 0.78468 0 45312000 23727000 21585000 392 812 169 173 598;599 598 ACGVSRPVIACSVTIK 16 1 1 Unmodified _ACGVSRPVIACSVTIK_ 0 0 1 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.9595 2 859.458024 1716.9015 64751.7 0.54942 0.00047221 -0.76081 -0.00065389 -0.21139 -0.00018168 859.959023272212 868.469124787394 73.448 0.49515 73.448 73.168 73.663 0 167 37 6 0 0 0 0.012159 1 38879 41.684 24.516 1 0.77633 0.63976 0 4248400 2591900 1656600 393 812 169 173 600 600 ACGVSRPVIACSVTIK 16 1 1 Unmodified _ACGVSRPVIACSVTIK_ 0 0 1 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.3079 3 573.307775 1716.9015 77879.09 0.42543 0.0002439 -0.23847 -0.00013672 0.18695 0.00010718 573.642114794037 579.315348502301 73.75 0.65125 73.75 73.466 74.117 0 320 45 10 0 0 0 8.2059E-06 2 38211 65.231 65.231 1 0.8227 0.70018 0 38150000 19854000 18296000 394 812 169 173 601;602 602 ACILCVHPR 9 0 1 Unmodified _ACILCVHPR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.1964 3 375.860044 1124.5583 97937.47 0.10882 4.0899E-05 0.27651 0.00010393 0.38533 0.00014483 375.860084305041 379.196216226313 41.11 0.30943 41.11 40.972 41.281 0 111 24 7 0 0 0 0.023473 1 21583 28.727 18.355 1 1.0074 1.0222 0 28873000 13438000 15436000 395 1741 170 174 603 603 ACILCVHPR 9 0 1 Unmodified _ACILCVHPR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.2909 2 563.286428 1124.5583 81831.95 0.34187 0.00019257 0.0075946 4.2779E-06 0.34946 0.00019685 563.286690292879 568.290417454874 46.284 0.48048 46.284 46.104 46.585 0 84 26 4 0 0 0 0.036972 1 21715 43.246 39.838 1 0.9961 0.89948 0 2099700 1016500 1083200 396 1741 170 174 604 604 ACIPVGLLGK 10 1 0 Unmodified _ACIPVGLLGK_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.3021 2 514.30207 1026.58959 88769 0.53561 0.00027546 -0.40398 -0.00020777 0.13163 6.7697E-05 514.301968392105 518.309022780773 90.01 0.91811 90.01 89.685 90.603 0 244 74 5 0 0 0 0.0088374 2 54327 55.531 55.531 1 0.73368 0.75758 0 29070000 16803000 12267000 397 899;1099 171 175 605;606 606 ACLDTAVENMPSLK 14 1 0 Oxidation (M) _ACLDTAVENM(ox)PSLK_ ACLDTAVENM(1)PSLK ACLDTAVENM(62.41)PSLK 0 1 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.877 2 782.870916 1563.72728 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.097 1 63.097 62.597 63.597 0 0 0 0 0.0011516 1 36237 62.408 49.452 1 398 587 172 176 607 607 437 ACLWGTGCVAGVLLQPSGAK 20 1 0 Unmodified _ACLWGTGCVAGVLLQPSGAK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1027.0272 2 1023.01898 2044.0234 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.21 1 116.21 115.71 116.71 0 0 0 0 0.046764 1 74157 32.275 24.364 1 399 397;1622 173 177 608 608 ACLWGTGCVAGVLLQPSGAK 20 1 0 Unmodified _ACLWGTGCVAGVLLQPSGAK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1027.5278 2 1023.01898 2044.0234 NaN NaN NaN -0.62981 -0.0006443 NaN NaN NaN NaN 115.62 0.22995 115.62 115.48 115.71 0 0 0 0 1.0561E-06 3 75547 68.034 62.31 1 NaN NaN 0 4439000 0 4439000 400 397;1622 173 177 609;610;611 611 ACMLTTATAHDGDVNVISWSR 21 0 1 Oxidation (M) _ACM(ox)LTTATAHDGDVNVISWSR_ ACM(1)LTTATAHDGDVNVISWSR ACM(42.71)LTTATAHDGDVNVISWSR 0 1 0 Q8NCK5;Q9BQ67;B4DTI1;M0QX71 Q8NCK5 Q8NCK5 GRWD1 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.032 3 774.359815 2320.05761 69309.48 1.0259 0.00079443 0.19187 0.00014858 1.2178 0.00094301 774.693515488546 777.696593728629 82.825 0.26862 82.825 82.666 82.935 7.6294E-06 62 21 5 0 0 0 1.5162E-05 1 49458 42.711 41.414 1 0.79431 0.8288 0 10547000 4223100 6324300 401 1922 174 178 612 612 1751 ACPRPEGLNFQDLK 14 1 1 Unmodified _ACPRPEGLNFQDLK_ 0 0 1 B2R7E8;P15927;B4DQD9;B4DL94;Q5TEJ0;B4DUL2 B2R7E8 B2R7E8 RPA2 Replication protein A 32 kDa subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.9437 3 548.943602 1643.80898 80568.15 0.39279 0.00021562 -0.14298 -7.8486E-05 0.24981 0.00013713 548.94367257555 554.95089234744 79.638 0.48872 79.638 79.333 79.822 0 144 30 7 0 0 0 0.024638 1 42923 24.53 22.037 1 0.32546 0.26977 0 3839700 2969100 870590 402 850 175 179 613 613 ACQIFVR 7 0 1 Unmodified _ACQIFVR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.2408 2 447.23673 892.458907 90865.95 0.3103 0.00013878 -0.28395 -0.00012699 0.02635 1.1785E-05 447.236446250273 452.240756515763 43.65 0.59794 43.65 43.463 44.061 3.8147E-06 275 52 7 0 0 0 0.022924 1 23325 91.584 48.811 1 1.3819 1.5569 0 97954000 41817000 56137000 403 1599 176 180 614 614 ACQIFVR 7 0 1 Unmodified _ACQIFVR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.2408 2 447.23673 892.458907 88980.98 0.2683 0.00011999 0.63415 0.00028361 0.90244 0.00040361 447.236694204072 452.24098669662 42.934 0.91687 42.934 42.536 43.453 0 373 76 8 0 0 0 0.03065 1 23129 68.398 30.028 1 1.3332 1.5277 0 83411000 31457000 51954000 404 1599 176 180 615 615 ACQIFVR 7 0 1 Unmodified _ACQIFVR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 452.2404 2 447.23673 892.458907 92570.88 0.0072167 3.2276E-06 -0.25755 -0.00011519 -0.25034 -0.00011196 447.236425367548 452.24061417897 50.166 0.99287 50.166 49.561 50.553 0 296 83 4 0 0 0 0.051188 1 24525 54.525 27.209 1 0.89251 0.75355 0 4799200 2861400 1937800 405 1599 176 180 616 616 ACQIFVR 7 0 1 Unmodified _ACQIFVR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 452.2404 2 447.23673 892.458907 92026.98 -0.21203 -9.4827E-05 0.099681 4.4581E-05 -0.11235 -5.0246E-05 447.236626066728 452.240760355819 50.228 1.0324 50.228 49.714 50.746 0 314 86 5 0 0 0 0.060773 1 24006 50.12 22.803 1 0.95227 0.84173 0 3777700 1844500 1933200 406 1599 176 180 617 617 ACQSIYPLHDVFVR 14 0 1 Unmodified _ACQSIYPLHDVFVR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;D6RB09;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.292 3 568.95573 1703.84536 80129.48 1.0502 0.00059753 -0.10371 -5.9006E-05 0.94652 0.00053853 568.955776657768 572.291797805966 90.829 1.5597 90.829 89.822 91.382 0 761 128 8 0 0 0 9.301E-07 2 54921 103.76 103.76 1 0.80144 0.91414 0 120270000 65298000 54968000 407 742 177 181 618;619 619 ACQSIYPLHDVFVR 14 0 1 Unmodified _ACQSIYPLHDVFVR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;D6RB09;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.9315 2 852.929957 1703.84536 65890.3 1.2538 0.0010694 -0.15724 -0.00013412 1.0966 0.00093529 852.930021749775 858.435494162654 90.745 0.54226 90.745 90.457 91 0 87 45 4 0 0 0 0.00021928 1 54757 66.595 66.595 1 1.057 1.0904 0 24178000 14379000 9799000 408 742 177 181 620 620 ACQSIYPLHDVFVR 14 0 1 Unmodified _ACQSIYPLHDVFVR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;D6RB09;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.9355 2 852.929957 1703.84536 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.465 1 90.465 89.965 90.965 -7.6294E-06 0 0 0 0.001122 1 54672 76.143 58.775 1 409 742 177 181 621 621 ACQSIYPLHDVFVR 14 0 1 Unmodified _ACQSIYPLHDVFVR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;D6RB09;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.2919 3 568.95573 1703.84536 80707.46 0.66034 0.0003757 -0.17658 -0.00010047 0.48376 0.00027524 569.28993476913 572.29176512338 89.218 1.5172 89.218 88.373 89.89 -7.6294E-06 690 127 7 0 0 0 1.5685E-05 3 55113 92.939 92.939 1 0.77919 0.88998 0 149410000 81110000 68296000 410 742 177 181 622;623;624 624 ACQSIYPLHDVFVR 14 0 1 Unmodified _ACQSIYPLHDVFVR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;D6RB09;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.9318 2 852.929957 1703.84536 NaN NaN NaN 0.73928 0.00063055 NaN NaN NaN NaN 89.301 0.24231 89.301 89.155 89.397 0 0 0 0 0.00021847 1 55029 84.479 67.537 1 NaN NaN 0 15156000 15156000 0 411 742 177 181 625 625 ACQSIYPLHDVFVR 14 0 1 Unmodified _ACQSIYPLHDVFVR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;D6RB09;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.9293 2 852.929957 1703.84536 NaN NaN NaN 0.53652 0.00045761 NaN NaN NaN NaN 89.467 0.11739 89.467 89.36 89.477 0 0 0 0 0.00025314 1 55200 83.081 72.773 1 NaN NaN 0 8877100 8877100 0 412 742 177 181 626 626 ACQSIYPLHDVFVR 14 0 1 Unmodified _ACQSIYPLHDVFVR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;D6RB09;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.956 3 568.95573 1703.84536 79056.3 0.50699 0.00028845 -0.15976 -9.0899E-05 0.34722 0.00019755 568.955763298329 572.291723522065 102.79 1.1067 102.79 102.28 103.39 0 525 75 10 0 0 0 0.0071912 2 58161 33.616 33.616 1 0.89853 0.76984 0 41014000 21412000 19602000 413 742 177 181 627;628 627 ACQSIYPLHDVFVR 14 0 1 Unmodified _ACQSIYPLHDVFVR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;D6RB09;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 857.9345 2 852.929957 1703.84536 66504.72 0.61429 0.00052395 -0.13332 -0.00011371 0.48098 0.00041024 852.929970802723 857.934038012745 102.77 0.68398 102.77 102.43 103.12 0 244 46 8 0 0 0 0.0016045 2 58277 51.998 51.998 1 0.84043 0.72353 0 7340700 4077200 3263400 414 742 177 181 629;630 630 ACQSIYPLHDVFVR 14 0 1 Unmodified _ACQSIYPLHDVFVR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;D6RB09;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.9564 3 568.95573 1703.84536 78947.57 0.35556 0.0002023 -0.085576 -4.8689E-05 0.26998 0.00015361 568.955763938097 572.291763701038 102.51 1.0289 102.51 101.98 103 0 513 71 11 0 0 0 0.0025154 1 57084 29.491 29.491 1 0.83938 0.73218 0 32259000 18835000 13425000 415 742 177 181 631 631 ACTQLVDNLVEHILK 15 1 0 Unmodified _ACTQLVDNLVEHILK_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.3171 3 584.981945 1751.924 79377.28 0.95844 0.00056067 0.96761 0.00056604 1.9261 0.0011267 585.316778312009 587.653852293054 131.86 0.30173 131.86 131.69 131.99 0 50 11 8 0 0 0 0.00082233 1 79173 44.252 44.252 1 0.63131 0.51487 0 5785000 3681300 2103700 416 1843 178 182 632 632 ACVCQTLGISPEEK 14 1 0 Unmodified _ACVCQTLGISPEEK_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.8844 2 796.376365 1590.73818 71742.63 0.54934 0.00043748 -0.75745 -0.00060321 -0.20811 -0.00016573 796.375471567978 800.88497839535 65.004 0.3967 65.004 64.837 65.234 0 81 34 4 0 0 0 0.003354 1 37357 47.288 44.876 1 0.98554 0.991 0 7343100 4495300 2847900 417 684 179 183 633 633 ACVCQTLGISPEEK 14 1 0 Unmodified _ACVCQTLGISPEEK_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.3837 2 796.376365 1590.73818 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.681 1 63.681 63.181 64.181 3.8147E-06 0 0 0 0.0053379 1 37452 55.452 48.564 1 418 684 179 183 634 634 ACVCQTLGISPEEK 14 1 0 Unmodified _ACVCQTLGISPEEK_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 796.3762 2 796.376365 1590.73818 67612.41 0.70172 0.00055883 -0.67113 -0.00053447 0.030595 2.4365E-05 796.376012317148 800.383453510278 74.794 0.52876 74.794 74.505 75.034 0 169 37 7 0 0 0 0.0013286 1 39700 54.471 48.087 1 1.4674 1.1437 0 3313000 1584500 1728500 419 684 179 183 635 635 ACVCQTLGISPEEK 14 1 0 Unmodified _ACVCQTLGISPEEK_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 800.3844 2 796.376365 1590.73818 67397.82 0.49849 0.00039698 -0.39584 -0.00031524 0.10264 8.1743E-05 796.877148901047 800.38354515021 75.175 0.4967 75.175 74.95 75.447 0 152 35 7 0 0 0 0.0011912 3 39179 55.452 49.212 1 1.4617 1.1868 0 2867800 1322900 1544900 420 684 179 183 636;637;638 637 ACVQGECGVCHYCR 14 0 1 Unmodified _ACVQGECGVCHYCR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.8987 3 585.898793 1754.67455 79458.87 0.43875 0.00025706 -0.79001 -0.00046287 -0.35127 -0.00020581 585.898537698027 589.234753139891 23.181 0.26236 23.181 23.03 23.292 0 55 12 7 0 0 0 5.3716E-06 1 9108 76.073 76.073 1 0.44888 0.46976 0 10811000 7184800 3626200 421 1323 180 184 639 639 ACVQGECGVCHYCR 14 0 1 Unmodified _ACVQGECGVCHYCR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.8464 2 878.344551 1754.67455 65472.18 -0.039624 -3.4803E-05 -0.048971 -4.3013E-05 -0.088594 -7.7816E-05 878.345027465664 883.848676642563 22.857 0.19572 22.857 22.77 22.965 0 31 8 6 0 0 0 7.8893E-05 2 8811 88.681 85.948 1 0.7072 0.76018 0 3228200 2093200 1135000 422 1323 180 184 640;641 640 ACVQGECGVCHYCR 14 0 1 Unmodified _ACVQGECGVCHYCR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.2335 3 585.898793 1754.67455 77484.66 0.075356 4.4151E-05 -0.609 -0.00035681 -0.53365 -0.00031266 585.898960336781 589.569081863348 22.879 0.25011 22.879 22.744 22.994 -1.9073E-06 60 10 9 0 0 0 6.3246E-05 2 8839 66.393 66.393 1 0.58981 0.59047 0 11384000 7416000 3968400 423 1323 180 184 642;643 642 ADAEVIILPK 10 1 0 Acetyl (Protein N-term) _(ac)ADAEVIILPK_ 1 0 0 O60832;C9IYT0;U5UA77;U5U7S7;U5U768 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1118.6555 1 1110.6405 1109.63323 58089.57 0.19251 0.0002138 0.42253 0.00046928 0.61504 0.00068309 1110.64080903535 1118.65514971766 117.98 0.66644 117.98 117.6 118.26 -7.6294E-06 207 40 7 0 0 0 6.2096E-05 1 75403 90.657 90.657 1 0.84247 0.91421 0 45608000 25720000 19887000 424 1398 181 185 644 644 ADAEVIILPK 10 1 0 Acetyl (Protein N-term) _(ac)ADAEVIILPK_ 1 0 0 O60832;C9IYT0;U5UA77;U5U7S7;U5U768 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.8219 2 555.823889 1109.63323 85438.59 0.68244 0.00037932 -0.53151 -0.00029543 0.15093 8.3889E-05 555.823470501049 559.831010398002 117.9 0.42729 117.9 117.71 118.14 0 53 24 4 0 0 0 0.0045184 1 75521 67.897 67.897 1 0.92002 1.0068 0 3259000 1535900 1723100 425 1398 181 185 645 645 ADAEVIILPK 10 1 0 Acetyl (Protein N-term) _(ac)ADAEVIILPK_ 1 0 0 O60832;C9IYT0;U5UA77;U5U7S7;U5U768 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.8241 2 555.823889 1109.63323 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.5 1 117.5 117 118 -7.6294E-06 0 0 0 2.4216E-05 1 77081 82.287 72.258 1 426 1398 181 185 646 646 ADALQLSVEEFVER 14 0 1 Unmodified _ADALQLSVEEFVER_ 0 0 0 B2WTI3;B2WTI4;K7EJU9;A0A0S2PZM4;Q6NYC1 B2WTI3 B2WTI3 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 808.4499 2 803.409577 1604.8046 73028.33 1.2519 0.0010058 0.251 0.00020165 1.5029 0.0012075 803.911087359434 808.414534204501 118.28 0.43972 118.28 118.08 118.52 0 125 26 6 0 0 0 0.0077167 1 75834 58.172 46.604 1 1.5693 1.5711 0 8993000 3378800 5614200 427 543 182 186 647 647 ADALQLSVEEFVER 14 0 1 Unmodified _ADALQLSVEEFVER_ 0 0 0 B2WTI3;B2WTI4;K7EJU9;A0A0S2PZM4;Q6NYC1 B2WTI3 B2WTI3 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 808.4161 2 803.409577 1604.8046 68149.35 0.62705 0.00050377 0.74095 0.00059529 1.368 0.0010991 803.409832980054 808.414390805524 130.77 0.53638 130.77 130.52 131.05 0 116 23 7 0 0 0 0.0093591 2 79181 37.144 27.667 1 1.1868 1.028 0 1977000 875410 1101600 428 543 182 186 648;649 648 ADALQLSVEEFVER 14 0 1 Unmodified _ADALQLSVEEFVER_ 0 0 0 B2WTI3;B2WTI4;K7EJU9;A0A0S2PZM4;Q6NYC1 B2WTI3 B2WTI3 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.41 2 803.409577 1604.8046 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.52 1 130.52 130.02 131.02 0 0 0 0 0.024468 1 78194 43.897 27.265 1 429 543 182 186 650 650 ADAQLLLHNTVIFYGADSEQADIAR 25 0 1 Unmodified _ADAQLLLHNTVIFYGADSEQADIAR_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;Q6PJR5;A0A0A0MRY2 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 911.4634 3 911.127712 2730.36131 62749.87 0.72602 0.0006615 0.47785 0.00043538 1.2039 0.0010969 911.462773836243 914.798294021659 123.42 0.60748 123.42 123.06 123.67 0 118 25 9 0 0 0 2.6837E-06 2 73812 44.6 44.6 1 1.9785 1.6964 0 8566600 3107700 5458900 430 1758 183 187 651;652 652 ADAQLLLHNTVIFYGADSEQADIAR 25 0 1 Unmodified _ADAQLLLHNTVIFYGADSEQADIAR_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;Q6PJR5;A0A0A0MRY2 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 914.7989 3 911.127712 2730.36131 63967.52 0.69865 0.00063656 -0.15269 -0.00013912 0.54596 0.00049744 911.462472088984 914.797890809664 123.27 0.38596 123.27 123.05 123.43 0 112 17 10 0 0 0 5.447E-10 2 72771 59.912 59.912 1 1.753 1.4251 0 9890600 3767200 6123400 431 1758 183 187 653;654 654 ADAVQDSEMVELVELEIR 18 0 1 Oxidation (M) _ADAVQDSEM(ox)VELVELEIR_ ADAVQDSEM(1)VELVELEIR ADAVQDSEM(52.55)VELVELEIR 0 1 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1036.5093 2 1031.50408 2060.9936 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.71 1 112.71 112.21 113.21 0 0 0 0 0.0015509 1 71218 52.555 47.071 1 432 1580 184 188 655 655 1357 ADDADEFGYSR 11 0 1 Unmodified _ADDADEFGYSR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.2587 2 623.254557 1244.49456 77417.51 0.63697 0.000397 -0.053983 -3.3645E-05 0.58299 0.00036335 623.254400981767 628.258564771861 40.337 0.44968 40.337 40.047 40.496 0 162 38 6 0 0 0 4.4729E-10 1 21045 130.94 124.84 1 1.6994 1.8041 0 42265000 17178000 25087000 433 618 185 189 656 656 ADDADEFGYSR 11 0 1 Unmodified _ADDADEFGYSR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.2547 2 623.254557 1244.49456 78053.48 0.59689 0.00037201 -0.038769 -2.4163E-05 0.55812 0.00034785 623.254447806391 628.258558809076 39.225 0.45563 39.225 39.051 39.506 0 176 40 6 0 0 0 1.318E-05 1 20774 107.58 101.48 1 1.6038 1.8184 0 48256000 19300000 28956000 434 618 185 189 657 657 ADDADEFGYSR 11 0 1 Unmodified _ADDADEFGYSR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 623.2549 2 623.254557 1244.49456 78344.55 0.38901 0.00024245 0.18113 0.00011289 0.57015 0.00035535 623.254646710614 628.258759333571 46.219 0.42735 46.219 46.019 46.446 -3.8147E-06 147 31 6 0 0 0 0.0025884 2 22242 61.353 60.851 1 1.1034 0.93774 0 2870900 1372600 1498300 435 618 185 189 658;659 659 ADDADEFGYSR 11 0 1 Unmodified _ADDADEFGYSR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.2589 2 623.254557 1244.49456 77541.02 0.29225 0.00018214 0.12134 7.5627E-05 0.41359 0.00025777 623.254562784199 628.258641646014 46.33 0.59083 46.33 46.17 46.76 0 115 32 6 0 0 0 0.00085012 1 21745 72.006 71.009 1 1.0336 0.91301 0 1895600 977680 917870 436 618 185 189 660 660 ADDLLPLGDQTQDGDFGSR 19 0 1 Unmodified _ADDLLPLGDQTQDGDFGSR_ 0 0 0 O43290;B4DDH9;B4DP43 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1010.968 2 1010.46634 2018.91813 NaN NaN NaN -0.86768 -0.00087677 NaN NaN NaN NaN 100.6 0.42104 100.6 100.4 100.82 0 0 0 0 0.030042 1 61682 32.734 25.19 1 NaN NaN 0 7753300 7753300 0 437 1384 186 190 661 661 ADEASELACPTPK 13 1 0 Unmodified _ADEASELACPTPK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.3251 2 694.821749 1387.62895 73308.66 0.84706 0.00058856 0.13027 9.0516E-05 0.97734 0.00067908 694.821899551948 698.829017456628 41.667 0.52187 41.667 41.435 41.957 0 153 42 6 0 0 0 6.4733E-06 3 21976 104.52 102.77 1 1.7391 1.8483 0 16076000 5865100 10211000 438 587 187 191 662;663;664 663 ADEASELACPTPK 13 1 0 Unmodified _ADEASELACPTPK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.8296 2 694.821749 1387.62895 73584.77 0.79869 0.00055495 -0.03173 -2.2047E-05 0.76696 0.0005329 694.821967824053 698.828787635051 40.852 0.49883 40.852 40.618 41.117 0 108 35 4 0 0 0 3.1522E-30 2 21918 168.22 162.44 1 1.7492 1.799 0 17966000 6538800 11427000 439 587 187 191 665;666 665 ADEASELACPTPK 13 1 0 Unmodified _ADEASELACPTPK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.8218 2 694.821749 1387.62895 73288.72 0.22295 0.00015491 0.054144 3.762E-05 0.27709 0.00019253 694.821925204413 698.828980608453 48.764 0.45784 48.764 48.506 48.964 0 153 36 6 0 0 0 0.00060712 2 23180 61.213 57.568 1 1.012 0.81923 0 2585800 1188900 1396900 440 587 187 191 667;668 667 ADEAYLIGR 9 0 1 Unmodified _ADEAYLIGR_ 0 0 0 A0A024R5C5;P11498;E9PRE7 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.2765 2 504.261456 1006.50836 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.176 1 56.176 55.676 56.676 0 0 0 0 0.0036347 1 31633 69.825 41.942 1 441 176 188 192 669 669 ADEAYLIGR 9 0 1 Unmodified _ADEAYLIGR_ 0 0 0 A0A024R5C5;P11498;E9PRE7 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.2653 2 504.261456 1006.50836 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.228 1 56.228 55.728 56.728 3.8147E-06 0 0 0 0.0034281 1 31661 70.525 30.879 1 442 176 188 192 670 670 ADEAYLIGR 9 0 1 Unmodified _ADEAYLIGR_ 0 0 0 A0A024R5C5;P11498;E9PRE7 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.265 2 504.261456 1006.50836 88331.26 0.16277 8.2078E-05 0.14259 7.1902E-05 0.30536 0.00015398 504.261537916554 509.265367756287 55.311 0.5351 55.311 55.012 55.547 0 88 38 4 0 0 0 0.0017345 1 31624 81.548 57.972 1 1.6302 1.6192 0 7312000 2847800 4464300 443 176 188 192 671 671 ADEGISFR 8 0 1 Unmodified _ADEGISFR_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.7236 2 447.719424 893.424296 90135.16 0.2182 9.7692E-05 -0.087724 -3.9276E-05 0.13047 5.8416E-05 447.719212827551 452.723435624776 43.736 0.73444 43.736 43.486 44.22 0 304 64 7 0 0 0 0.010755 2 23375 71.501 31.398 1 3.0561 3.5214 0 150400000 33374000 117030000 444 1690 189 193 672;673 672 ADEGISFR 8 0 1 Unmodified _ADEGISFR_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.7238 2 447.719424 893.424296 90163.74 0.30979 0.0001387 0.14464 6.476E-05 0.45443 0.00020346 447.719281103215 452.723535802334 43.058 1.252 43.058 42.536 43.788 0 392 102 7 0 0 0 0.0092293 2 23138 75.213 40.389 1 2.9001 3.3017 0 109990000 27501000 82493000 445 1690 189 193 674;675 674 ADEGISFR 8 0 1 Unmodified _ADEGISFR_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 452.7236 2 447.719424 893.424296 89338.77 0.028861 1.2921E-05 0.066285 2.9677E-05 0.095145 4.2598E-05 447.719165124206 452.723523792618 50.365 1.0851 50.365 49.802 50.887 0 329 87 5 0 0 0 0.013893 1 24555 64.265 24.161 1 2.4105 2.0641 0 6026100 1681200 4344900 446 1690 189 193 676 676 ADEGISFR 8 0 1 Unmodified _ADEGISFR_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 452.7234 2 447.719424 893.424296 89852.13 -0.2145 -9.6036E-05 0.27742 0.0001242 0.062917 2.8169E-05 447.719352131226 452.723612276213 50.507 1.093 50.507 50.048 51.141 0 338 82 6 0 0 0 0.023225 1 24127 56.659 26.047 1 2.6709 2.2307 0 4949300 1263400 3686000 447 1690 189 193 677 677 ADEPSSEESDLEIDK 15 1 0 Unmodified _ADEPSSEESDLEIDK_ 0 0 0 Q1XBU7;F6VDH7;Q3KNR6;Q0IJ56;B4E0U6;A0A140VKA6;Q8IZP2;P50502 Q1XBU7 Q1XBU7 ST13;ST13P4 Putative protein FAM10A4;Hsc70-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 836.3703 2 832.362686 1662.71082 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.191 1 52.191 51.691 52.691 0 0 0 0 0.0013359 1 28974 61.11 50.281 1 448 622 190 194 678 678 ADEWLMK 7 1 0 Oxidation (M) _ADEWLM(ox)K_ ADEWLM(1)K ADEWLM(49.36)K 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.72 2 454.712753 907.410954 NaN NaN NaN -0.39631 -0.00018021 NaN NaN NaN NaN 39.558 0.35013 39.558 39.398 39.749 0 0 0 0 0.02298 1 21023 49.358 39.221 1 NaN NaN 0 11815000 0 11815000 449 81;1544 191 195 679 679 50 ADFAQACQDAGVR 13 0 1 Unmodified _ADFAQACQDAGVR_ 0 0 0 A0A024R5C5;P11498;E9PRE7 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.8225 2 704.817332 1407.62011 NaN NaN NaN 0.54213 0.0003821 NaN NaN NaN NaN 41.501 0.26512 41.501 41.389 41.655 0 0 0 0 0.00077554 1 22325 79.659 61.347 1 NaN NaN 0 4932300 0 4932300 450 176 192 196 680 680 ADFCIIHYAGK 11 1 0 Unmodified _ADFCIIHYAGK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.8846 3 432.213141 1293.61759 94732.17 0.047245 2.042E-05 0.10854 4.6913E-05 0.15579 6.7332E-05 432.213223999792 434.884561188654 69.879 0.60024 69.879 69.535 70.135 0 167 49 6 0 0 0 0.0083573 1 41595 39.625 37.203 1 1.6376 1.644 0 13722000 6314800 7406800 451 81;1544 193 197 681 681 ADFCIIHYAGK 11 1 0 Unmodified _ADFCIIHYAGK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.8215 2 647.816073 1293.61759 74036.63 0.68794 0.00044566 -0.88056 -0.00057044 -0.19262 -0.00012478 647.816003720666 651.822649446016 80.949 0.47106 80.949 80.61 81.081 0 139 34 5 0 0 0 0.025895 1 42869 40.994 40.994 1 2.6299 2.1537 0 4932300 1571700 3360600 452 81;1544 193 197 682 682 ADFFEDENGQR 11 0 1 Unmodified _ADFFEDENGQR_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573;B3KMA6 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.2806 2 664.281106 1326.54766 76121.61 0.34312 0.00022793 0.32561 0.00021629 0.66873 0.00044422 664.28128116528 669.28540305269 50.251 0.42362 50.251 50.026 50.449 0 132 40 4 0 0 0 0.023264 1 27664 42.336 42.336 1 1.2367 1.2745 0 24495000 14095000 10400000 453 150 194 198 683 683 ADFFEDENGQR 11 0 1 Unmodified _ADFFEDENGQR_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573;B3KMA6 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.2816 2 664.281106 1326.54766 75221.41 0.57389 0.00038122 0.0082224 5.462E-06 0.58211 0.00038668 664.28124477406 669.285091625464 49.045 0.47395 49.045 48.834 49.308 0 165 40 6 0 0 0 0.00041586 1 27547 80.231 80.231 1 1.1485 1.2432 0 27259000 11716000 15543000 454 150 194 198 684 684 ADFPAGIPECGTDALR 16 0 1 Unmodified _ADFPAGIPECGTDALR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;B4DT32;H0Y426 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.9044 2 845.398686 1688.78282 67439.09 0.96428 0.0008152 -0.71894 -0.00060779 0.24534 0.00020741 845.398333253662 850.401959468452 93.992 0.42709 93.992 93.728 94.155 0 120 39 5 0 0 0 0.0014219 2 57016 45.257 39.024 1 0.96169 1.0038 0 13282000 6965900 6315900 455 363 195 199 685;686 686 ADFPAGIPECGTDALR 16 0 1 Unmodified _ADFPAGIPECGTDALR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;B4DT32;H0Y426 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.3993 2 845.398686 1688.78282 67270.35 0.84215 0.00071195 -1.2891 -0.0010898 -0.44692 -0.00037783 845.397689722135 850.40178348875 93.273 0.38487 93.273 93.071 93.456 -7.6294E-06 114 34 6 0 0 0 0.0035069 2 57845 36.847 33.719 1 0.67792 0.69482 0 21020000 14519000 6500900 456 363 195 199 687;688 688 ADFPAGIPECGTDALR 16 0 1 Unmodified _ADFPAGIPECGTDALR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;B4DT32;H0Y426 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 845.3997 2 845.398686 1688.78282 68626.2 0.76234 0.00064448 0.090667 7.665E-05 0.85301 0.00072113 845.398860879562 850.40377006925 107.21 0.43458 107.21 106.92 107.35 0 90 26 5 0 0 0 0.0023212 1 61354 41.401 30.495 1 0.60139 0.50475 0 3131500 1597900 1533600 457 363 195 199 689 689 ADFTVVAGDEGSSTTGGSSEENK 23 1 0 Unmodified _ADFTVVAGDEGSSTTGGSSEENK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1123.4921 2 1122.99057 2243.96659 58089.97 0.054438 6.1134E-05 0.16625 0.0001867 0.22069 0.00024783 1122.99112262319 1127.49899459686 57.785 0.48912 57.785 57.558 58.047 3.8147E-06 197 38 7 0 0 0 3.6214E-30 5 32599 135.47 132.15 1 0.56508 0.60167 0 15930000 9162700 6766900 458 1589 196 200 690;691;692;693;694 693 ADFTVVAGDEGSSTTGGSSEENK 23 1 0 Unmodified _ADFTVVAGDEGSSTTGGSSEENK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1122.9889 2 1122.99057 2243.96659 57797.2 0.26595 0.00029866 0.13861 0.00015566 0.40456 0.00045432 1123.4922888483 1126.99805213763 56.831 0.48606 56.831 56.634 57.12 0 192 36 7 0 0 0 1.4444E-29 2 32717 128.06 128.06 1 0.52471 0.5452 0 24638000 14609000 10029000 459 1589 196 200 695;696 696 ADFVLAANSYDLAIK 15 1 0 Unmodified _ADFVLAANSYDLAIK_ 0 0 0 B2R8G6;A0A024R7P2;B7Z6M0;Q14318;U3KQ64;M0R2K9 B2R8G6 B2R8G6 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8;Peptidyl-prolyl cis-trans isomerase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.4272 2 805.924863 1609.83517 NaN NaN NaN -0.26404 -0.0002128 NaN NaN NaN NaN 112.43 0.44437 112.43 112.21 112.66 0 0 0 0 0.0043571 1 70892 57.836 32.45 1 NaN NaN 0 5326300 5326300 0 460 232 197 201 697 697 ADFVLAANSYDLAIK 15 1 0 Unmodified _ADFVLAANSYDLAIK_ 0 0 0 B2R8G6;A0A024R7P2;B7Z6M0;Q14318;U3KQ64;M0R2K9 B2R8G6 B2R8G6 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8;Peptidyl-prolyl cis-trans isomerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.4277 2 805.924863 1609.83517 70467.22 0.89438 0.0007208 -0.63583 -0.00051243 0.25855 0.00020837 805.924768528034 809.93087788815 111.85 0.48056 111.85 111.58 112.06 -7.6294E-06 130 34 6 0 0 0 0.00022235 1 72299 67.385 67.385 1 0.77789 0.79333 0 12117000 6676000 5441000 461 232 197 201 698 698 ADGELNVDSLITR 13 0 1 Acetyl (Protein N-term) _(ac)ADGELNVDSLITR_ 1 0 0 V9HW04;P62140;C9J9S3;C9JP48 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.8712 2 722.867545 1443.72054 71937.89 0.99842 0.00072172 0.28189 0.00020377 1.2803 0.00092549 723.369373327645 727.871511072645 119.26 0.52723 119.26 119.01 119.54 0 121 34 6 0 0 0 0.0010164 2 76602 61.213 52.988 1 1.0483 1.0494 0 8984700 4729200 4255500 462 1633 198 202 699;700 700 ADGELNVDSLITR 13 0 1 Acetyl (Protein N-term) _(ac)ADGELNVDSLITR_ 1 0 0 V9HW04;P62140;C9J9S3;C9JP48 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.8727 2 722.867545 1443.72054 73236.06 0.70964 0.00051298 0.3647 0.00026363 1.0743 0.00077661 723.369538421815 727.872005297213 118.88 0.51859 118.88 118.66 119.18 0 108 32 4 0 0 0 0.010547 1 78235 46.352 28.488 1 1.0554 1.0627 0 9344500 4260700 5083700 463 1633 198 202 701 701 ADGTSLDFSTYR 12 0 1 Unmodified _ADGTSLDFSTYR_ 0 0 0 Q8NG31;H0YCZ2;H0YEY7 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.3146 2 666.806956 1331.59936 74777.05 0.52207 0.00034812 0.077641 5.1771E-05 0.59971 0.00039989 666.806991737673 671.811138837195 81.925 0.67781 81.925 81.516 82.194 0 133 37 5 0 0 0 0.0029944 1 43557 57.174 46.023 1 1.2785 1.1259 0 1875900 671960 1204000 464 1928 199 203 702 702 ADGYVLEGK 9 1 0 Unmodified _ADGYVLEGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.2426 2 476.242732 950.470912 87153.04 0.44083 0.00020994 0.20562 9.7923E-05 0.64645 0.00030787 476.242778017787 480.249832913853 35.917 1.523 35.917 35.347 36.87 0 596 143 6 0 0 0 0.00064829 4 18369 96.311 67.209 1 0.75499 0.8989 0 633760000 346790000 286970000 465 1635 200 204 703;704;705;706 705 ADGYVLEGK 9 1 0 Unmodified _ADGYVLEGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.7514 2 476.242732 950.470912 86541.84 0.52914 0.000252 0.24496 0.00011666 0.77409 0.00036866 476.242830474856 480.249828192261 35.111 1.2872 35.111 34.702 35.989 0 575 112 8 0 0 0 0.0040455 6 17741 70.256 54.053 1 0.73543 0.86854 0 1138200000 654880000 483280000 466 1635 200 204 707;708;709;710;711;712 708 ADGYVLEGK 9 1 0 Unmodified _ADGYVLEGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.2497 2 476.242732 950.470912 85485.5 0.056188 2.6759E-05 0.46978 0.00022373 0.52596 0.00025049 476.242986806131 480.249926194264 40.821 1.726 40.821 40.27 41.996 0 661 136 10 0 0 0 0.0054512 4 18632 66.692 51.253 1 0.9509 0.83268 0 194960000 102660000 92303000 467 1635 200 204 713;714;715;716 713 ADGYVLEGK 9 1 0 Unmodified _ADGYVLEGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.2502 2 476.242732 950.470912 87246.16 0.068636 3.2687E-05 0.27748 0.00013215 0.34611 0.00016483 476.242866368584 480.249829076265 40.829 2.0043 40.829 40.152 42.156 3.8147E-06 785 160 10 0 0 0 0.0087237 4 18086 60.828 46.053 1 0.9052 0.77412 0 112960000 58878000 54077000 468 1635 200 204 717;718;719;720 717 ADHQPLTEASYVNLPTIALCNTDSPLR 27 0 1 Unmodified _ADHQPLTEASYVNLPTIALCNTDSPLR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1003.5029 3 999.497588 2995.47093 60124.43 0.73475 0.00073438 -0.25535 -0.00025522 0.4794 0.00047916 999.831774885556 1003.1676630874 117.05 0.70517 117.05 116.72 117.42 0 447 51 12 0 0 0 3.5593E-16 4 74680 70.145 70.145 1 1.5067 1.7181 0 119640000 47099000 72545000 469 119 201 205 721;722;723;724 722 ADHQPLTEASYVNLPTIALCNTDSPLR 27 0 1 Unmodified _ADHQPLTEASYVNLPTIALCNTDSPLR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 999.8333 3 999.497588 2995.47093 60005.62 0.51916 0.0005189 0.042453 4.2431E-05 0.56161 0.00056133 999.832021262745 1003.16800395801 116.49 0.58469 116.49 116.2 116.79 7.6294E-06 352 37 12 0 0 0 5.9836E-20 2 76099 86.131 86.131 1 1.451 1.6715 0 221120000 87795000 133330000 470 119 201 205 725;726 726 ADHQPLTEASYVNLPTIALCNTDSPLR 27 0 1 Unmodified _ADHQPLTEASYVNLPTIALCNTDSPLR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1002.8329 3 999.497588 2995.47093 60555.09 0.77211 0.00077172 0.29951 0.00029936 1.0716 0.0010711 999.832217779478 1003.16804230277 128.5 0.53949 128.5 128.3 128.84 0 206 23 13 0 0 0 4.2711E-19 3 77566 78.128 78.128 1 1.422 1.2225 0 44796000 17800000 26996000 471 119 201 205 727;728;729 728 ADHQPLTEASYVNLPTIALCNTDSPLR 27 0 1 Unmodified _ADHQPLTEASYVNLPTIALCNTDSPLR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1003.1686 3 999.497588 2995.47093 60213.32 0.46157 0.00046134 -0.019242 -1.9233E-05 0.44233 0.00044211 999.832001787194 1003.1679534826 128.39 0.48039 128.39 128.09 128.57 0 176 19 13 0 0 0 6.9022E-16 2 76554 65.765 65.765 1 1.3648 1.1908 0 56069000 23158000 32911000 472 119 201 205 730;731 731 ADIDLTK 7 1 0 Unmodified _ADIDLTK_ 0 0 0 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 392.2204 2 388.213443 774.412334 95844.48 0.18811 7.3025E-05 -0.17448 -6.7736E-05 0.013625 5.2896E-06 388.213315155436 392.220408184522 33.573 0.62474 33.573 33.29 33.915 0 245 51 7 0 0 0 0.029647 1 16775 69.998 25.277 1 1.1668 1.3041 0 99226000 49001000 50225000 473 1639 202 206 732 732 ADILEDK 7 1 0 Unmodified _ADILEDK_ 0 0 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7 M0QZM1;P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 406.2186 2 402.210901 802.407249 96793.98 0.36525 0.00014691 0.299 0.00012026 0.66425 0.00026717 402.210961014079 406.218124933294 31.29 0.41304 31.29 31.027 31.44 0 153 38 7 0 0 0 0.031506 1 15360 67.032 35.743 1 1.3595 1.534 0 133860000 59664000 74197000 474 1599;1354 203 207 733 733 ADLEMQIESLK 11 1 0 Oxidation (M) _ADLEM(ox)QIESLK_ ADLEM(1)QIESLK ADLEM(83.44)QIESLK 0 1 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.8256 2 646.82376 1291.63297 NaN NaN NaN -0.1948 -0.000126 NaN NaN NaN NaN 83.89 0.62297 83.89 83.415 84.038 0 0 0 0 0.00044195 1 51259 83.438 50.213 1 NaN NaN 0 31771000 31771000 0 + 475 1150 204 208 734 734 855 ADLEMQIESLK 11 1 0 Oxidation (M) _ADLEM(ox)QIESLK_ ADLEM(1)QIESLK ADLEM(61.56)QIESLK 0 1 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.824 2 646.82376 1291.63297 NaN NaN NaN -0.062922 -4.0699E-05 NaN NaN NaN NaN 84.455 0.60795 84.455 84.198 84.806 0 0 0 0 0.0025152 1 51797 61.56 25.226 1 NaN NaN 0 16795000 16795000 0 + 476 1150 204 208 735 735 855 ADLEMQIESLK 11 1 0 Oxidation (M) _ADLEM(ox)QIESLK_ ADLEM(1)QIESLK ADLEM(69.98)QIESLK 0 1 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.8247 2 646.82376 1291.63297 NaN NaN NaN 0.18463 0.00011942 NaN NaN NaN NaN 97.446 0.46517 97.446 97.269 97.734 0 0 0 0 0.00090858 2 54841 69.979 36.113 1 NaN NaN 0 4612700 4612700 0 + 477 1150 204 208 736;737 737 855 ADLEMQIESLTEELAYLK 18 1 0 Oxidation (M) _ADLEM(ox)QIESLTEELAYLK_ ADLEM(1)QIESLTEELAYLK ADLEM(88.28)QIESLTEELAYLK 0 1 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1056.075 2 1056.52448 2111.0344 NaN NaN NaN 0.52573 0.00055544 NaN NaN NaN NaN 134.97 0.25513 134.97 134.86 135.11 0 0 0 0 6.1786E-10 1 82642 88.282 66.981 1 NaN NaN 0 71496000 71496000 0 + 478 1161 205 209 738 738 873 ADLESLLQTPGGK 13 1 0 Unmodified _ADLESLLQTPGGK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8638 2 664.856449 1327.69835 74213.59 0.80622 0.00053602 -0.26269 -0.00017465 0.54353 0.00036137 664.856013776755 668.863403058372 96.775 0.92046 96.775 96.336 97.256 -7.6294E-06 273 80 6 0 0 0 2.8405E-06 2 58870 109.11 93.78 1 0.91899 1.0297 0 64692000 31057000 33636000 479 1887 206 210 739;740 739 ADLESLLQTPGGK 13 1 0 Unmodified _ADLESLLQTPGGK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8566 2 664.856449 1327.69835 73544.1 0.72903 0.0004847 -0.27166 -0.00018062 0.45736 0.00030408 664.856085280279 668.863455274429 96.075 1.1764 96.075 95.587 96.763 0 445 100 6 0 0 0 1.2701E-18 2 59973 139.64 116.28 1 1.0145 1.1338 0 95483000 42639000 52844000 480 1887 206 210 741;742 742 ADLESLLQTPGGKPR 15 1 1 Unmodified _ADLESLLQTPGGKPR_ 0 0 1 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.2928 3 527.958017 1580.85222 83554.04 0.73535 0.00038823 -0.051936 -2.742E-05 0.68342 0.00036081 528.291983054721 533.965687994922 82.859 0.47694 82.859 82.589 83.066 0 139 38 6 0 0 0 0.0023428 1 49443 45.864 45.864 1 0.91863 1.0692 0 30513000 10217000 20296000 481 1887 207 211 743 743 ADLESLLQTPGGKPR 15 1 1 Unmodified _ADLESLLQTPGGKPR_ 0 0 1 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.295 3 527.958017 1580.85222 83422.4 0.74342 0.00039249 0.12484 6.5912E-05 0.86826 0.00045841 527.958175733811 533.965474093122 81.668 0.51923 81.668 81.402 81.921 0 191 43 6 0 0 0 0.012776 1 49802 19.669 8.7244 1 0.71279 0.82501 0 33350000 17419000 15931000 482 1887 207 211 744 744 ADLESLLQTPGGKPR 15 1 1 Unmodified _ADLESLLQTPGGKPR_ 0 0 1 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 800.4462 2 791.433387 1580.85222 67533.59 0.72421 0.00057316 -0.62007 -0.00049074 0.10414 8.2421E-05 791.933573528754 800.444732644825 94.725 0.44656 94.725 94.509 94.956 0 118 30 6 0 0 0 0.011747 1 52948 45.653 45.653 1 2.0811 1.7122 0 5121500 1979800 3141600 483 1887 207 211 745 745 ADLFPILMR 9 0 1 Unmodified _ADLFPILMR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.3069 2 538.30207 1074.58959 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.87 1 118.87 118.37 119.37 0 0 0 0 0.050456 1 76360 46.426 27.695 1 484 1412 208 212 746 746 ADLHGAIISVTK 12 1 0 Unmodified _ADLHGAIISVTK_ 0 0 0 A0A0A0MQS4;A8MYC1;K7ERD7;O95707 A0A0A0MQS4 A0A0A0MQS4 POP4 Ribonuclease P protein subunit p29 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8579 2 612.85097 1223.68739 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.558 1 59.558 59.058 60.058 0 0 0 0 0.0011794 1 33951 71.03 49.567 1 485 462 209 213 747 747 ADLHGAIISVTK 12 1 0 Unmodified _ADLHGAIISVTK_ 0 0 0 A0A0A0MQS4;A8MYC1;K7ERD7;O95707 A0A0A0MQS4 A0A0A0MQS4 POP4 Ribonuclease P protein subunit p29 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.3596 2 612.85097 1223.68739 NaN NaN NaN -0.87958 -0.00053905 NaN NaN NaN NaN 58.335 0.13353 58.335 58.241 58.374 0 0 0 0 0.0049329 1 33885 63.073 33.903 1 NaN NaN 0 3989700 0 3989700 486 462 209 213 748 748 ADLINNLGTIAK 12 1 0 Unmodified _ADLINNLGTIAK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;O14942;Q58FF8;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q14568;B4DTA5;Q86SX1 B4DMA2;Q58FF8;K9JA46 B4DMA2 HSP90AB1;HSP90AB2P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.8636 2 621.856252 1241.69795 77604.82 0.69996 0.00043527 -0.0060197 -3.7434E-06 0.69394 0.00043153 621.85649383271 625.863484219462 91.799 1.0723 91.799 91.449 92.521 0 553 96 11 0 0 0 2.5406E-05 2 55518 100.88 100.88 1 2.3739 2.8064 0 400910000 117210000 283710000 487 379;1348;1800 210 214 749;750 749 ADLINNLGTIAK 12 1 0 Unmodified _ADLINNLGTIAK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;O14942;Q58FF8;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q14568;B4DTA5;Q86SX1 B4DMA2;Q58FF8;K9JA46 B4DMA2 HSP90AB1;HSP90AB2P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.8638 2 621.856252 1241.69795 77095.23 0.71412 0.00044408 0.048011 2.9856E-05 0.76213 0.00047394 621.856566360429 625.863470848177 91.012 0.797 91.012 90.669 91.466 0 468 67 11 0 0 0 0.00020181 2 56145 89.827 82.029 1 2.4562 2.8936 0 543600000 160550000 383050000 488 379;1348;1800 210 214 751;752 751 ADLINNLGTIAK 12 1 0 Unmodified _ADLINNLGTIAK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;O14942;Q58FF8;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q14568;B4DTA5;Q86SX1 B4DMA2;Q58FF8;K9JA46 B4DMA2 HSP90AB1;HSP90AB2P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.8636 2 621.856252 1241.69795 76936.11 0.60807 0.00037813 -0.44518 -0.00027684 0.16289 0.00010129 621.856228624183 625.863174238448 105.28 0.80447 105.28 104.8 105.6 7.6294E-06 327 51 11 0 0 0 0.0099857 1 59902 46.73 36.206 1 1.5333 1.293 0 56038000 22456000 33583000 489 379;1348;1800 210 214 753 753 ADLINNLGTIAK 12 1 0 Unmodified _ADLINNLGTIAK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;O14942;Q58FF8;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q14568;B4DTA5;Q86SX1 B4DMA2;Q58FF8;K9JA46 B4DMA2 HSP90AB1;HSP90AB2P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.8567 2 621.856252 1241.69795 76847.8 0.50149 0.00031186 -0.36739 -0.00022846 0.1341 8.3394E-05 621.85628277093 625.86329722286 105.04 0.82893 105.04 104.59 105.42 7.6294E-06 360 51 11 0 0 0 0.0088077 2 59055 47.559 47.559 1 1.5515 1.3152 0 64318000 25277000 39040000 490 379;1348;1800 210 214 754;755 755 ADLIPYQDSPEGPDHSSASSGVPNPPK 27 1 0 Unmodified _ADLIPYQDSPEGPDHSSASSGVPNPPK_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6;H7C318 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.1041 3 921.434982 2761.28312 63205.2 0.34308 0.00031612 0.068716 6.3317E-05 0.41179 0.00037944 921.434292077379 924.775207811419 77.254 0.522 77.254 77.014 77.536 7.6294E-06 163 44 6 0 0 0 0.00034307 1 45571 31.384 31.384 1 0.60635 0.62997 0 16949000 9715700 7233500 491 1938 211 215 756 756 ADLIPYQDSPEGPDHSSASSGVPNPPK 27 1 0 Unmodified _ADLIPYQDSPEGPDHSSASSGVPNPPK_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6;H7C318 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.7692 3 921.434982 2761.28312 63765.79 0.19471 0.00017942 0.12484 0.00011504 0.31956 0.00029445 921.769332112036 924.775101639138 76.361 0.57658 76.361 76.088 76.664 0 164 45 6 0 0 0 0.00026061 1 45974 32.72 32.72 1 0.66845 0.71616 0 21266000 12736000 8530100 492 1938 211 215 757 757 ADLIPYQDSPEGPDHSSASSGVPNPPK 27 1 0 Unmodified _ADLIPYQDSPEGPDHSSASSGVPNPPK_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6;H7C318 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 924.775 3 921.434982 2761.28312 63401.49 0.77544 0.00071451 -0.040363 -3.7192E-05 0.73507 0.00067732 921.769208507546 924.440186131157 88.594 0.70069 88.594 88.25 88.95 0 208 43 8 0 0 0 0.0019834 2 48801 23.917 23.917 1 1.5413 1.2223 0 4406600 2169200 2237400 493 1938 211 215 758;759 758 ADLLLSTQPGREEGSPLELER 21 0 2 Unmodified _ADLLLSTQPGREEGSPLELER_ 0 0 1 B4E2Z3;F5GZS6;J3KPF3;P08195;F5GZI0 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.3853 3 770.736044 2309.1863 71315.1 1.1161 0.00086026 -0.22215 -0.00017122 0.894 0.00068904 771.404143044422 777.408012520484 95.406 0.45299 95.406 95.156 95.609 -7.6294E-06 125 38 6 0 0 0 0.015781 1 59454 28.813 28.813 1 1.1697 1.2223 0 13490000 5169600 8320400 494 1072 212 216 760 760 ADLLLSTQPGREEGSPLELER 21 0 2 Unmodified _ADLLLSTQPGREEGSPLELER_ 0 0 1 B4E2Z3;F5GZS6;J3KPF3;P08195;F5GZI0 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.072 3 770.736044 2309.1863 70359.48 0.8571 0.0006606 0.59352 0.00045745 1.4506 0.001118 771.070636683456 777.408735765505 109 0.35719 109 108.83 109.18 -7.6294E-06 86 16 8 0 0 0 0.023293 1 62740 20.256 20.256 1 1.3718 1.1853 0 5095100 2172900 2922200 495 1072 212 216 761 761 ADLLQREEEEEEEEDQEGDR 20 0 2 Unmodified _ADLLQREEEEEEEEDQEGDR_ 0 0 1 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.0151 3 816.680881 2447.02081 NaN NaN NaN 0.32502 0.00026544 NaN NaN NaN NaN 51.999 0.31378 51.999 51.852 52.166 3.8147E-06 0 0 0 1.0555E-06 2 29554 67.928 64.83 1 NaN NaN 0 4103000 4103000 0 496 1756 213 217 762;763 762 ADLLQREEEEEEEEDQEGDRETTIR 25 0 3 Unmodified _ADLLQREEEEEEEEDQEGDRETTIR_ 0 0 2 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.8427 4 762.843261 3047.34394 68192.38 0.50177 0.00038278 0.1348 0.00010283 0.63658 0.00048561 763.344400318588 770.3500690691 61.48 0.93521 61.48 60.983 61.918 -3.8147E-06 503 71 10 0 0 0 0.0015619 1 34946 25.604 25.604 1 0.83292 0.90992 0 40151000 21888000 18263000 497 1756 214 218 764 764 ADLLQREEEEEEEEDQEGDRETTIR 25 0 3 Unmodified _ADLLQREEEEEEEEDQEGDRETTIR_ 0 0 2 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.3492 4 762.843261 3047.34394 67855.67 0.67923 0.00051815 -0.33534 -0.00025581 0.34389 0.00026234 763.093817653077 770.348568044878 59.793 0.66233 59.793 59.489 60.152 -3.8147E-06 458 55 11 0 0 0 2.9378E-16 3 34774 93.633 93.633 1 0.94378 0.95741 0 85879000 43137000 42742000 498 1756 214 218 765;766;767 766 ADLLQREEEEEEEEDQEGDRETTIR 25 0 3 Unmodified _ADLLQREEEEEEEEDQEGDRETTIR_ 0 0 2 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.0947 4 762.843261 3047.34394 68069.04 0.43327 0.00033052 -0.0045016 -3.434E-06 0.42877 0.00032708 763.093951285003 770.600202211034 71.696 0.63834 71.696 71.403 72.041 -7.6294E-06 346 48 9 0 0 0 3.818E-06 1 37737 45.126 45.126 1 1.0212 1.1735 0 45866000 21304000 24562000 499 1756 214 218 768 768 ADLLQREEEEEEEEDQEGDRETTIR 25 0 3 Unmodified _ADLLQREEEEEEEEDQEGDRETTIR_ 0 0 2 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.3458 4 762.843261 3047.34394 67719.48 0.41307 0.00031511 -0.053118 -4.0521E-05 0.35995 0.00027459 763.093770216189 770.60020506981 72.284 0.64167 72.284 72.013 72.655 0 356 54 9 0 0 0 3.3456E-13 1 37331 79.445 79.445 1 1.097 1.3183 0 38954000 16167000 22787000 500 1756 214 218 769 769 ADLPEGVAVSGPSPAEFCR 19 0 1 Unmodified _ADLPEGVAVSGPSPAEFCR_ 0 0 0 Q8IXI1;H3BU27 Q8IXI1 Q8IXI1 RHOT2 Mitochondrial Rho GTPase 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.9666 2 979.967464 1957.92038 NaN NaN NaN -0.72317 -0.00070869 NaN NaN NaN NaN 95.75 0.21918 95.75 95.674 95.893 0 0 0 0 0.017169 1 58291 37.594 24.613 1 NaN NaN 0 5535100 5535100 0 501 1893 215 219 770 770 ADLPEGVAVSGPSPAEFCR 19 0 1 Unmodified _ADLPEGVAVSGPSPAEFCR_ 0 0 0 Q8IXI1;H3BU27 Q8IXI1 Q8IXI1 RHOT2 Mitochondrial Rho GTPase 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 979.969 2 979.967464 1957.92038 NaN NaN NaN -0.043556 -4.2683E-05 NaN NaN NaN NaN 95.184 0.15569 95.184 95.076 95.232 0 0 0 0 0.0012418 1 59221 52.265 30.392 1 NaN NaN 0 5947700 5947700 0 502 1893 215 219 771 771 ADLPEGVAVSGPSPAEFCR 19 0 1 Unmodified _ADLPEGVAVSGPSPAEFCR_ 0 0 0 Q8IXI1;H3BU27 Q8IXI1 Q8IXI1 RHOT2 Mitochondrial Rho GTPase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 984.9702 2 979.967464 1957.92038 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.11 1 95.11 94.61 95.61 -7.6294E-06 0 0 0 0.036484 1 59193 37.55 30.348 1 503 1893 215 219 772 772 ADLTALFLPR 10 0 1 Unmodified _ADLTALFLPR_ 0 0 0 B4DIX0;Q13045;Q59H95 B4DIX0 B4DIX0 FLII Protein flightless-1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.8286 2 558.824224 1115.63389 83775.99 1.3782 0.00077016 -0.90938 -0.00050818 0.46881 0.00026198 558.82360714674 563.827942534655 118.44 0.50504 118.44 118.2 118.7 0 103 29 5 0 0 0 1.0498E-06 2 75969 111.95 99.42 1 2.4251 2.4636 0 7505700 2236800 5268900 504 984 216 220 773;774 774 ADLTALFLPR 10 0 1 Unmodified _ADLTALFLPR_ 0 0 0 B4DIX0;Q13045;Q59H95 B4DIX0 B4DIX0 FLII Protein flightless-1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.8246 2 558.824224 1115.63389 82508.16 0.86116 0.00048123 -0.28388 -0.00015864 0.57727 0.00032259 558.824056041788 563.828163578411 117.94 0.53539 117.94 117.68 118.22 0 131 36 5 0 0 0 1.0498E-06 2 77409 111.95 102.43 1 2.0924 2.0824 0 7890100 3068000 4822100 505 984 216 220 775;776 776 ADMVIEAVFEDLSLK 15 1 0 Oxidation (M) _ADM(ox)VIEAVFEDLSLK_ ADM(1)VIEAVFEDLSLK ADM(85.29)VIEAVFEDLSLK 0 1 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.4375 2 848.429121 1694.84369 65314.43 0.85118 0.00072216 -0.2954 -0.00025063 0.55578 0.00047154 848.42962626531 852.436434040972 132.84 0.64375 132.84 132.48 133.13 0 158 32 8 0 0 0 2.5653E-05 2 86674 85.288 81.643 1 1.3334 1.316 0 9284800 3692500 5592300 506 1228 217 221 777;778 778 940 ADMVIEAVFEDLSLK 15 1 0 Oxidation (M) _ADM(ox)VIEAVFEDLSLK_ ADM(1)VIEAVFEDLSLK ADM(78.69)VIEAVFEDLSLK 0 1 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.9402 2 848.429121 1694.84369 65515.82 1.0388 0.00088139 0.2306 0.00019565 1.2694 0.001077 848.931370225753 852.436484034662 132.46 0.65802 132.46 132.08 132.74 0 132 39 6 0 0 0 7.8731E-05 1 88583 78.692 78.692 1 1.4655 1.5172 0 11342000 4361000 6981000 507 1228 217 221 779 779 940 ADPAFGLESSGIAGTTSDEPERIEESGNDEAR 32 0 2 Unmodified _ADPAFGLESSGIAGTTSDEPERIEESGNDEAR_ 0 0 1 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q59G16 Q59G16 SMARCC2 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1103.4988 3 1103.16595 3306.47602 58018.51 0.10559 0.00011648 -0.18605 -0.00020524 -0.080464 -8.8765E-05 1103.49953313447 1109.83792307787 89.678 0.37926 89.678 89.511 89.89 0 153 30 7 0 0 0 7.3621E-44 5 55411 115.18 114.55 1 0.68569 0.77625 0 31162000 17572000 13591000 508 321 218 222 780;781;782;783;784 784 ADPDGPEAQAEACSGER 17 0 1 Unmodified _ADPDGPEAQAEACSGER_ 0 0 0 Q9NX24;D6RC52;D6RCB9;J3QSY4 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.3673 2 880.363029 1758.71151 64670.57 0.89153 0.00078487 0.060024 5.2843E-05 0.95156 0.00083771 880.363160461948 885.367257629427 26.164 0.46328 26.164 25.923 26.387 0 164 27 8 0 0 0 8.5294E-59 2 11583 188.25 182.22 1 0.69297 0.75512 0 51353000 29224000 22129000 509 2077 219 223 785;786 786 ADPDGPEAQAEACSGER 17 0 1 Unmodified _ADPDGPEAQAEACSGER_ 0 0 0 Q9NX24;D6RC52;D6RCB9;J3QSY4 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.3635 2 880.363029 1758.71151 64719.56 0.48091 0.00042337 0.086274 7.5953E-05 0.56718 0.00049933 880.363140551398 885.367277666755 25.816 0.41383 25.816 25.628 26.042 0 192 28 9 0 0 0 4.9874E-25 2 11294 139.86 135.52 1 0.7578 0.87315 0 73098000 37825000 35273000 510 2077 219 223 787;788 787 ADPDGPEAQAEACSGER 17 0 1 Unmodified _ADPDGPEAQAEACSGER_ 0 0 0 Q9NX24;D6RC52;D6RCB9;J3QSY4 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 880.3638 2 880.363029 1758.71151 64637.34 0.37872 0.00033341 -0.1249 -0.00010996 0.25382 0.00022346 880.363200225479 885.367396193596 30.585 0.48247 30.585 30.334 30.816 -1.9073E-06 203 32 8 0 0 0 6.8693E-05 2 12669 71.279 70.634 1 0.80661 0.6594 0 13818000 6696300 7121700 511 2077 219 223 789;790 790 ADPDGPEAQAEACSGER 17 0 1 Unmodified _ADPDGPEAQAEACSGER_ 0 0 0 Q9NX24;D6RC52;D6RCB9;J3QSY4 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 880.363 2 880.363029 1758.71151 64570.26 0.10884 9.5817E-05 -0.069629 -6.1299E-05 0.039209 3.4518E-05 880.363462668716 885.367606303304 31.021 0.49712 31.021 30.738 31.235 -1.9073E-06 197 25 11 0 0 0 0.0017288 2 12410 38.799 38.799 1 0.74167 0.61002 0 14010000 7991800 6018200 512 2077 219 223 791;792 792 ADPSQFELLK 10 1 0 Unmodified _ADPSQFELLK_ 0 0 0 B4DKZ2;B4DG22;B7ZB17;P51812;B1AXG1;B1AXG2;F2Z2J1;Q15349;D6RA62;D6RE03 B4DKZ2 B4DKZ2 RPS6KA3;RPS6KA2 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.3106 2 574.303321 1146.59209 82365.54 0.91848 0.00052749 0.14734 8.4618E-05 1.0658 0.00061211 574.302838175832 578.311038455756 84.605 0.47163 84.605 84.343 84.814 0 86 38 5 0 0 0 0.0032994 1 50674 65.156 46.062 1 1.3527 1.3901 0 10680000 4054800 6625000 513 971 220 224 793 793 ADQDRLDLEER 11 0 2 Unmodified _ADQDRLDLEER_ 0 0 1 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709;Q68EN4 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.7223 3 453.88815 1358.64262 89299.65 -0.048443 -2.1988E-05 1.9765 0.0008971 1.928 0.00087511 454.224349438804 460.560260617426 33.249 0.56152 33.249 32.922 33.484 0 200 51 7 0 0 0 0.046051 1 16642 31.526 21.993 1 0.50499 0.57273 0 33433000 20658000 12774000 514 1739 221 225 794 794 ADQLTEEQIAEFK 13 1 0 Acetyl (Protein N-term) _(ac)ADQLTEEQIAEFK_ 1 0 0 Q9BRL5;P0DP25;P0DP24;P0DP23;B4DJ51;B2RDW0;H0Y7A7;F8WBR5;M0QZ52;G3V479 Q9BRL5 Q9BRL5 CALM3;CALM2;CALM1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.3892 2 782.380485 1562.74642 70331.99 0.58487 0.00045759 0.26106 0.00020425 0.84592 0.00066183 782.380909368251 786.388026277739 109.52 0.51697 109.52 109.29 109.8 0 96 39 4 0 0 0 0.0054806 1 68582 50.354 50.354 1 1.111 1.0975 0 9356300 5454200 3902100 515 890 222 226 795 795 ADRDESSPYAAMLAAQDVAQR 21 0 2 Oxidation (M) _ADRDESSPYAAM(ox)LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(87.77)LAAQDVAQR 0 1 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.6941 3 761.021967 2280.04407 67984.24 0.35719 0.00027183 -0.16843 -0.00012818 0.18876 0.00014365 761.356079666747 767.694206735767 64.756 0.77968 64.756 64.209 64.989 7.6294E-06 468 69 10 0 0 0 2.0107E-11 2 37083 87.772 87.772 1 1.1896 1.2985 0 174590000 78211000 96383000 516 1638 223 227 796;797 796 1418 ADRDESSPYAAMLAAQDVAQR 21 0 2 Oxidation (M) _ADRDESSPYAAM(ox)LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(90.46)LAAQDVAQR 0 1 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.028 3 761.021967 2280.04407 68197.5 0.35595 0.00027089 -0.056648 -4.3111E-05 0.2993 0.00022778 761.356300412063 768.028508634125 65.211 0.79311 65.211 64.882 65.675 0 640 70 12 0 0 0 1.5702E-11 2 37671 90.464 86.732 1 1.2603 1.376 0 190920000 84147000 106780000 517 1638 223 227 798;799 799 1418 ADRDESSPYAAMLAAQDVAQR 21 0 2 Oxidation (M) _ADRDESSPYAAM(ox)LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(66.04)LAAQDVAQR 0 1 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.029 3 761.021967 2280.04407 67951.7 0.70248 0.0005346 -0.35744 -0.00027202 0.34504 0.00026259 761.356029784096 767.694048127196 63.343 0.66052 63.343 62.858 63.519 3.8147E-06 446 54 12 0 0 0 2.9703E-08 2 37024 66.045 66.045 1 1.1613 1.377 0 189570000 91862000 97710000 518 1638 223 227 800;801 800 1418 ADRDESSPYAAMLAAQDVAQR 21 0 2 Oxidation (M) _ADRDESSPYAAM(ox)LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(94.23)LAAQDVAQR 0 1 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.3568 3 761.021967 2280.04407 67974.22 0.54309 0.00041331 -0.24666 -0.00018771 0.29644 0.0002256 761.356211540124 767.694068120161 63.807 0.91396 63.807 63.485 64.399 3.8147E-06 682 83 12 0 0 0 9.5313E-12 2 37596 94.234 90.502 1 1.2891 1.5324 0 208890000 91082000 117810000 519 1638 223 227 802;803 802 1418 ADRDESSPYAAMLAAQDVAQR 21 0 2 Oxidation (M) _ADRDESSPYAAM(ox)LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(70.45)LAAQDVAQR 0 1 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.6945 3 761.021967 2280.04407 68761.16 0.71635 0.00054515 -0.43995 -0.00033481 0.2764 0.00021035 761.355786712816 768.0283403415 74.46 0.70656 74.46 74.057 74.764 0 438 47 13 0 0 0 1.8503E-08 1 39409 70.452 70.452 1 0.72277 0.58697 0 45217000 25430000 19786000 520 1638 223 227 804 804 1418 ADRDESSPYAAMLAAQDVAQR 21 0 2 Oxidation (M) _ADRDESSPYAAM(ox)LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(48.24)LAAQDVAQR 0 1 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 761.3573 3 761.021967 2280.04407 68517.65 0.67351 0.00051256 -0.28227 -0.00021481 0.39125 0.00029775 761.356205572532 767.694130597805 74.98 1.1022 74.98 74.692 75.794 0 489 80 12 0 0 0 3.1469E-06 2 39897 48.244 48.244 1 0.66291 0.53433 0 60321000 36128000 24193000 521 1638 223 227 805;806 805 1418 ADRDESSPYAAMLAAQDVAQR 21 0 2 Oxidation (M) _ADRDESSPYAAM(ox)LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(68.37)LAAQDVAQR 0 1 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.0286 3 761.021967 2280.04407 68480.55 0.57441 0.00043714 -0.45386 -0.0003454 0.12055 9.174E-05 761.355944817382 767.694004865158 74.904 0.57266 74.904 74.556 75.129 0 331 34 11 0 0 0 2.3796E-08 2 38852 68.369 68.369 1 0.69215 0.64613 0 36273000 21340000 14933000 522 1638 223 227 807;808 808 1418 ADRDESSPYAAMLAAQDVAQR 21 0 2 Oxidation (M) _ADRDESSPYAAM(ox)LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(87.77)LAAQDVAQR 0 1 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.3568 3 761.021967 2280.04407 68500.59 0.55929 0.00042563 -0.24738 -0.00018826 0.31191 0.00023737 761.356257725157 767.694102697396 75.379 0.72331 75.379 75.093 75.816 7.6294E-06 497 53 12 0 0 0 2.0107E-11 2 39326 87.772 87.772 1 0.68206 0.63892 0 45422000 26682000 18740000 523 1638 223 227 809;810 809 1418 ADRDESSPYAAMLAAQDVAQR 21 0 2 Unmodified _ADRDESSPYAAMLAAQDVAQR_ 0 0 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.0243 3 755.690329 2264.04916 NaN NaN NaN -0.26866 -0.00020303 NaN NaN NaN NaN 88.464 0.61287 88.464 88.138 88.75 0 0 0 0 2.0881E-08 2 53224 57.806 55.409 1 NaN NaN 0 9847700 9847700 0 524 1638 223 228 811;812 811 ADRDESSPYAAMLAAQDVAQR 21 0 2 Unmodified _ADRDESSPYAAMLAAQDVAQR_ 0 0 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.688 3 755.690329 2264.04916 NaN NaN NaN 0.19967 0.00015089 NaN NaN NaN NaN 87.435 0.55799 87.435 87.116 87.674 0 0 0 0 0.00025635 1 53741 45.395 42.058 1 NaN NaN 0 10601000 10601000 0 525 1638 223 228 813 813 ADRDESSPYAAMLAAQDVAQR 21 0 2 Unmodified _ADRDESSPYAAMLAAQDVAQR_ 0 0 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 762.3636 3 755.690329 2264.04916 68324.04 0.46372 0.00035043 0.026892 2.0322E-05 0.49062 0.00037075 756.02472865522 762.362674355487 100.89 0.7813 100.89 100.61 101.39 0 443 53 12 0 0 0 5.4685E-08 3 56993 66.045 66.045 1 1.2154 0.98766 0 44148000 18325000 25823000 526 1638 223 228 814;815;816 814 ADRDESSPYAAMLAAQDVAQR 21 0 2 Unmodified _ADRDESSPYAAMLAAQDVAQR_ 0 0 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 755.6909 3 755.690329 2264.04916 68377.96 0.51878 0.00039204 -0.11763 -8.8894E-05 0.40115 0.00030315 756.024680291148 762.69680486682 100.78 0.80566 100.78 100.48 101.28 7.6294E-06 503 56 12 0 0 0 3.3381E-05 2 56103 41.256 37.762 1 1.1947 1.1199 0 47562000 22248000 25313000 527 1638 223 228 817;818 817 ADSLEVQQMK 10 1 0 Oxidation (M) _ADSLEVQQM(ox)K_ ADSLEVQQM(1)K ADSLEVQQM(51.85)K 0 1 0 A0A024R1D9;A0A024R1I0;A0A024R1F6;A0A024R1J9;A0A024R1J8;B7Z4B6;P35240 A0A024R1D9 A0A024R1D9 NF2 Merlin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.7809 2 582.781896 1163.54924 82173.62 0.44836 0.00026129 -1.5122 -0.00088127 -1.0638 -0.00061998 582.780647983968 586.787895496063 21.266 0.35023 21.266 21.114 21.465 0 61 15 7 0 0 0 0.0055913 1 7622 51.854 19.92 1 0.67476 0.66329 0 23513000 12444000 11069000 528 76 224 229 819 819 46 ADSLEVQQMK 10 1 0 Oxidation (M) _ADSLEVQQM(ox)K_ ADSLEVQQM(1)K ADSLEVQQM(50.61)K 0 1 0 A0A024R1D9;A0A024R1I0;A0A024R1F6;A0A024R1J9;A0A024R1J8;B7Z4B6;P35240 A0A024R1D9 A0A024R1D9 NF2 Merlin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.7814 2 582.781896 1163.54924 79733.59 0.56966 0.00033199 0.010856 6.3267E-06 0.58052 0.00033831 582.780657584778 586.78772448929 21.197 0.36739 21.197 21.015 21.382 0 79 17 9 0 0 0 0.0060358 1 7347 50.607 24.502 1 0.78759 0.79963 0 26343000 14385000 11958000 529 76 224 229 820 820 46 ADSLLAVVK 9 1 0 Unmodified _ADSLLAVVK_ 0 0 0 Q14151;A0PJ47 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.2864 2 458.279118 914.543683 90249.66 0.27772 0.00012727 0.14015 6.4227E-05 0.41787 0.0001915 458.279030734727 462.286250564222 80.233 0.51263 80.233 79.991 80.504 0 147 40 5 0 0 0 0.0013285 1 48818 86.833 60.939 1 1.3617 1.3866 0 16966000 8207100 8759200 530 1727 225 230 821 821 ADSNNLFNTGSSGPGK 16 1 0 Unmodified _ADSNNLFNTGSSGPGK_ 0 0 0 Q9UIF8;Q8NC87 Q9UIF8 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.3628 2 783.363158 1564.71176 NaN NaN NaN -0.45525 -0.00035662 NaN NaN NaN NaN 48.938 0.30106 48.938 48.804 49.106 0 0 0 0 0.011689 3 26825 62.088 52.766 1 NaN NaN 0 5457000 5457000 0 531 2102 226 231 822;823;824 824 ADSNNLFNTGSSGPGK 16 1 0 Unmodified _ADSNNLFNTGSSGPGK_ 0 0 0 Q9UIF8;Q8NC87 Q9UIF8 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.8646 2 783.363158 1564.71176 NaN NaN NaN -0.2284 -0.00017892 NaN NaN NaN NaN 47.797 0.14721 47.797 47.705 47.852 3.8147E-06 0 0 0 0.011768 1 26620 58.996 48.167 1 NaN NaN 0 5022300 5022300 0 532 2102 226 231 825 825 ADTCSFVR 8 0 1 Unmodified _ADTCSFVR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2185 2 478.218734 954.422915 NaN NaN NaN -0.28006 -0.00013393 NaN NaN NaN NaN 30.051 0.17121 30.051 29.944 30.115 0 0 0 0 0.0032369 1 14612 100.39 65.141 1 NaN NaN 0 8734700 8734700 0 533 44 227 232 826 826 ADTCSFVR 8 0 1 Unmodified _ADTCSFVR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.2248 2 478.218734 954.422915 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.058 1 30.058 29.558 30.558 0 0 0 0 0.009245 1 14640 77.923 45.987 1 534 44 227 232 827 827 ADTCSFVR 8 0 1 Unmodified _ADTCSFVR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.2185 2 478.218734 954.422915 NaN NaN NaN -0.52496 -0.00025105 NaN NaN NaN NaN 29.548 0.21168 29.548 29.454 29.666 -1.9073E-06 0 0 0 0.0070183 1 14259 83.753 56.228 1 NaN NaN 0 7649800 7649800 0 535 44 227 232 828 828 ADTCSFVR 8 0 1 Unmodified _ADTCSFVR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.223 2 478.218734 954.422915 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.558 1 29.558 29.058 30.058 1.9073E-06 0 0 0 0.023409 1 14284 66.073 37.966 1 536 44 227 232 829 829 ADTCSFVR 8 0 1 Unmodified _ADTCSFVR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.2182 2 478.218734 954.422915 85798.72 0.35762 0.00017102 0.13457 6.4352E-05 0.49219 0.00023537 478.218620477571 483.223242293871 33.76 0.21452 33.76 33.644 33.859 0 53 17 4 0 0 0 0.044697 1 14834 45.68 8.6594 1 1.5092 1.2636 0 3958600 1551100 2407500 537 44 227 232 830 830 ADTCSFVR 8 0 1 Unmodified _ADTCSFVR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.2196 2 478.218734 954.422915 87091.68 0.25925 0.00012398 0.36497 0.00017454 0.62422 0.00029851 478.218832361436 483.22312282223 33.846 0.24286 33.846 33.708 33.951 -3.8147E-06 59 19 4 0 0 0 0.062964 1 14417 39.022 20.986 1 1.3897 1.229 0 4021300 1480300 2541000 538 44 227 232 831 831 ADTEEEFLAFR 11 0 1 Unmodified _ADTEEEFLAFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.3152 2 664.311874 1326.6092 75340.13 0.79113 0.00052556 0.4073 0.00027057 1.1984 0.00079613 664.312128157687 669.316084667979 95.51 1.2135 95.51 94.961 96.175 7.6294E-06 531 99 9 0 0 0 8.8355E-13 2 57811 146.69 132.58 1 1.6804 1.9888 0 343510000 125630000 217880000 539 1569 228 233 832;833 832 ADTEEEFLAFR 11 0 1 Unmodified _ADTEEEFLAFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.3168 2 664.311874 1326.6092 75733.95 0.67784 0.0004503 0.37682 0.00025033 1.0547 0.00070063 664.312075368835 669.316085079866 94.707 1.2359 94.707 94.163 95.398 0 572 106 10 0 0 0 4.1354E-17 2 58688 159.58 151.05 1 1.7435 2.0215 0 307980000 113940000 194030000 540 1569 228 233 834;835 834 ADTEEEFLAFR 11 0 1 Unmodified _ADTEEEFLAFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.3165 2 664.311874 1326.6092 73861.8 0.74609 0.00049564 0.16032 0.0001065 0.90641 0.00060214 664.312073177889 669.31604881639 108.53 0.99564 108.53 108.13 109.13 -7.6294E-06 282 48 9 0 0 0 2.7755E-05 2 62145 101.9 89.369 1 3.1546 2.7184 0 65822000 15549000 50272000 541 1569 228 233 836;837 836 ADTEEEFLAFR 11 0 1 Unmodified _ADTEEEFLAFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.3166 2 664.311874 1326.6092 74924.65 0.61015 0.00040533 0.24388 0.00016202 0.85404 0.00056735 664.31209722803 669.316082899781 108.47 1.1982 108.47 108.06 109.26 0 309 58 10 0 0 0 2.2392E-31 2 61244 185.81 185.81 1 3.2127 2.8036 0 69385000 16187000 53198000 542 1569 228 233 838;839 838 ADTEEEFLAFRK 12 1 1 Unmodified _ADTEEEFLAFRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 491.9164 3 485.908663 1454.70416 88685.92 0.12812 6.2254E-05 0.22219 0.00010796 0.35031 0.00017022 485.908780910161 491.9162393573 83.129 0.60521 83.129 82.834 83.439 0 159 34 7 0 0 0 0.036595 1 45237 28.283 23.481 1 3.805 3.2409 0 9394900 1917300 7477600 543 1569 229 234 840 840 ADTEEEFLAFRK 12 1 1 Unmodified _ADTEEEFLAFRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.3715 2 728.359356 1454.70416 NaN NaN NaN 1.0478 0.00076319 NaN NaN NaN NaN 83.149 0.62178 83.149 82.834 83.456 0 0 0 0 5.7469E-05 1 45277 93.096 80.933 1 NaN NaN 0 10066000 0 10066000 544 1569 229 234 841 841 ADTEEEFLAFRK 12 1 1 Unmodified _ADTEEEFLAFRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.9161 3 485.908663 1454.70416 86538.51 0.30865 0.00014997 -0.17047 -8.2831E-05 0.13818 6.7143E-05 485.908609661938 491.916019511482 83.248 0.57817 83.248 82.96 83.538 0 161 32 9 0 0 0 0.020646 1 44571 28.327 26.804 1 3.99 3.3692 0 9274700 2232300 7042400 545 1569 229 234 842 842 ADTGLDDDIENEADISMYGK 20 1 0 Oxidation (M) _ADTGLDDDIENEADISM(ox)YGK_ ADTGLDDDIENEADISM(1)YGK ADTGLDDDIENEADISM(116.19)YGK 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1094.4652 2 1094.46535 2186.91614 58475.79 0.27295 0.00029873 0.26593 0.00029105 0.53888 0.00058978 1094.96695233724 1098.97421595509 88.906 0.52275 88.906 88.61 89.133 0 221 38 8 0 0 0 8.675E-18 2 53482 116.19 116.19 1 0.87235 0.93951 0 33570000 18992000 14578000 546 1421 230 235 843;844 844 1111 ADTGLDDDIENEADISMYGK 20 1 0 Oxidation (M) _ADTGLDDDIENEADISM(ox)YGK_ ADTGLDDDIENEADISM(1)YGK ADTGLDDDIENEADISM(157.2)YGK 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1094.9661 2 1094.46535 2186.91614 59695.63 -0.028417 -3.1101E-05 -0.012786 -1.3994E-05 -0.041203 -4.5096E-05 1094.96659537503 1098.97411396757 88.357 0.37265 88.357 88.106 88.479 0 107 34 5 0 0 0 6.6191E-41 2 54396 157.2 157.2 1 0.71054 0.71659 0 28160000 12050000 16110000 547 1421 230 235 845;846 845 1111 ADTGLDDDIENEADISMYGK 20 1 0 Oxidation (M) _ADTGLDDDIENEADISM(ox)YGK_ ADTGLDDDIENEADISM(1)YGK ADTGLDDDIENEADISM(176.4)YGK 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1098.4736 2 1094.46535 2186.91614 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.097 1 88.097 87.597 88.597 0 0 0 0 5.6426E-68 1 54347 176.4 166.6 1 548 1421 230 235 847 847 1111 ADTGLDDDIENEADISMYGK 20 1 0 Unmodified _ADTGLDDDIENEADISMYGK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1086.9727 2 1086.46789 2170.92122 58525.93 0.30122 0.00032727 0.028251 3.0694E-05 0.32947 0.00035796 1086.96891001884 1090.97669268691 111.23 0.38051 111.23 110.99 111.37 -7.6294E-06 77 15 7 0 0 0 4.0825E-05 2 64391 47.532 46.743 1 1.3969 1.1078 0 4607800 1932300 2675500 549 1421 230 236 848;849 849 ADTLDPALLRPGR 13 0 2 Unmodified _ADTLDPALLRPGR_ 0 0 1 A8K2M0;P43686 A8K2M0 A8K2M0 PSMC4 26S protease regulatory subunit 6B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.5966 3 465.596531 1393.76776 88681.68 0.38638 0.0001799 0.069325 3.2277E-05 0.4557 0.00021217 465.596410459242 472.268956912317 70.565 0.46234 70.565 70.383 70.845 0 111 36 5 0 0 0 0.031454 1 42240 25.322 25.322 1 0.89144 0.90908 0 11510000 5316900 6193200 550 710 231 237 850 850 ADTLTDEINFLR 12 0 1 Unmodified _ADTLTDEINFLR_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DWU6;CON__P04259 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.8617 2 704.359356 1406.70416 NaN NaN NaN 0.14882 0.00010482 NaN NaN NaN NaN 111.3 0.69018 111.3 111.05 111.74 -7.6294E-06 0 0 0 2.3377E-08 1 69913 111.61 86.684 1 NaN NaN 0 90449000 90449000 0 + 551 859;1154 232 238 851 851 ADTLTDEINFLR 12 0 1 Unmodified _ADTLTDEINFLR_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DWU6;CON__P04259 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.3597 2 704.359356 1406.70416 NaN NaN NaN 0.16127 0.0001136 NaN NaN NaN NaN 110.72 0.64723 110.72 110.51 111.16 -7.6294E-06 0 0 0 3.0728E-13 1 71207 123.63 107.42 1 NaN NaN 0 67591000 67591000 0 + 552 859;1154 232 238 852 852 ADTLTDEINFLR 12 0 1 Unmodified _ADTLTDEINFLR_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DWU6;CON__P04259 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.3601 2 704.359356 1406.70416 NaN NaN NaN 0.27231 0.0001918 NaN NaN NaN NaN 122.39 0.61564 122.39 122.1 122.72 0 0 0 0 8.9078E-21 1 72022 142.43 126.22 1 NaN NaN 0 40364000 40364000 0 + 553 859;1154 232 238 853 853 ADTQTYQPYNK 11 1 0 Unmodified _ADTQTYQPYNK_ 0 0 0 A0A024R6D4;P84090 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.8102 2 664.809499 1327.60444 74497.89 0.97195 0.00064616 -0.16353 -0.00010871 0.80842 0.00053744 664.809427930301 668.816366783024 24.271 0.71141 24.271 24.061 24.772 1.9073E-06 150 29 10 0 0 0 1.5835E-131 2 9968 269.23 252.56 1 0.92537 1.0421 0 116880000 61482000 55400000 554 201 233 239 854;855 855 ADTQTYQPYNK 11 1 0 Unmodified _ADTQTYQPYNK_ 0 0 0 A0A024R6D4;P84090 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8098 2 664.809499 1327.60444 74414.43 0.3178 0.00021128 0.16659 0.00011075 0.4844 0.00032203 664.809571198779 668.816685989227 24.013 0.48606 24.013 23.792 24.278 1.9073E-06 117 18 9 0 0 0 1.7208E-132 2 9758 276.03 259.19 1 0.90562 1.0465 0 196880000 98765000 98111000 555 201 233 239 856;857 857 ADTQTYQPYNK 11 1 0 Unmodified _ADTQTYQPYNK_ 0 0 0 A0A024R6D4;P84090 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.8102 2 664.809499 1327.60444 73423.55 0.53333 0.00035457 0.38414 0.00025538 0.91747 0.00060994 664.809445796447 668.816582432462 27.219 0.53214 27.219 26.944 27.476 0 194 26 10 0 0 0 0.0012627 1 10414 68.846 64.063 1 0.63776 0.49987 0 16693000 10362000 6331500 556 201 233 239 858 858 ADTQTYQPYNK 11 1 0 Unmodified _ADTQTYQPYNK_ 0 0 0 A0A024R6D4;P84090 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.8096 2 664.809499 1327.60444 75364.7 0.26743 0.00017779 0.092473 6.1477E-05 0.35991 0.00023927 664.809485627285 668.816644731814 27.32 0.60423 27.32 27.091 27.695 0 81 23 4 0 0 0 1.5649E-12 2 10073 143.7 136.42 1 0.63568 0.52196 0 9320900 5575000 3745900 557 201 233 239 859;860 859 ADTTSTVTPVPGQEK 15 1 0 Unmodified _ADTTSTVTPVPGQEK_ 0 0 0 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.8874 2 765.885935 1529.75732 70231.24 0.86299 0.00066095 0.15259 0.00011687 1.0156 0.00077782 765.885728966985 769.893303828003 37.393 0.44058 37.393 37.203 37.644 0 80 36 5 0 0 0 0.00080537 1 19077 49.632 49.632 1 1.0204 1.0375 0 18040000 8451400 9589100 558 631 234 240 861 861 ADTTSTVTPVPGQEK 15 1 0 Unmodified _ADTTSTVTPVPGQEK_ 0 0 0 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.8894 2 765.885935 1529.75732 NaN NaN NaN 0.37845 0.00028985 NaN NaN NaN NaN 36.601 0.35228 36.601 36.472 36.824 0 0 0 0 0.0042802 1 18815 83.455 67.257 1 NaN NaN 0 11798000 11798000 0 559 631 234 240 862 862 ADTTTGSAAGPPLSEDDK 18 1 0 Unmodified _ADTTTGSAAGPPLSEDDK_ 0 0 0 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.4009 2 866.897228 1731.7799 65867.45 1.1271 0.00097705 -0.52723 -0.00045705 0.59984 0.00052 866.89675234772 870.903418635868 38.106 0.48697 38.106 37.837 38.324 3.8147E-06 145 41 6 0 0 0 1.2929E-05 1 19441 77.776 70.802 1 0.92781 0.94856 0 13131000 6851900 6278600 560 631 235 241 863 863 ADTTTGSAAGPPLSEDDK 18 1 0 Unmodified _ADTTTGSAAGPPLSEDDK_ 0 0 0 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.9034 2 866.897228 1731.7799 66269.02 0.53452 0.00046337 -0.62641 -0.00054303 -0.09189 -7.9659E-05 866.896922489759 870.903417374106 37.208 0.41011 37.208 37.004 37.414 -3.8147E-06 148 34 6 0 0 0 1.0457E-05 2 19267 79.639 79.639 1 0.77815 0.79712 0 17561000 9117500 8443800 561 631 235 241 864;865 865 ADTTTGSAAGPPLSEDDK 18 1 0 Unmodified _ADTTTGSAAGPPLSEDDK_ 0 0 0 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 870.9054 2 866.897228 1731.7799 65503.66 0.42813 0.00037114 0.054323 4.7092E-05 0.48245 0.00041823 866.897215320239 870.904360742387 43.634 0.57178 43.634 43.344 43.916 0 206 39 7 0 0 0 7.4598E-05 3 20578 50.562 50.562 1 1.2775 1.0178 0 2947700 1412000 1535700 562 631 235 241 866;867;868 868 ADTTTGSAAGPPLSEDDK 18 1 0 Unmodified _ADTTTGSAAGPPLSEDDK_ 0 0 0 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 866.8971 2 866.897228 1731.7799 NaN NaN NaN 0.18903 0.00016387 NaN NaN NaN NaN 43.869 0.53954 43.869 43.632 44.171 0 0 0 0 0.020281 2 20198 38.189 32.344 1 NaN NaN 0 1455800 1455800 0 563 631 235 241 869;870 869 ADTTTPTTIDPIHEPPSLPPEPK 23 1 0 Unmodified _ADTTTPTTIDPIHEPPSLPPEPK_ 0 0 0 O60885;A0A024R7H8;Q6PIS5;Q6NXE4;Q05BM2;Q5BJ26;M0QZD9 O60885 O60885 BRD4 Bromodomain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.4216 3 818.751472 2453.23259 69554.58 1.1041 0.00090395 0.51999 0.00042574 1.6241 0.0013297 819.08646089835 821.756871920406 91.241 0.16288 91.241 91.166 91.329 0 29 12 4 0 0 0 0.029452 1 55190 15.296 12.198 1 0.69714 0.71878 0 10890000 4969600 5920700 564 1399 236 242 871 871 ADTTTPTTIDPIHEPPSLPPEPK 23 1 0 Unmodified _ADTTTPTTIDPIHEPPSLPPEPK_ 0 0 0 O60885;A0A024R7H8;Q6PIS5;Q6NXE4;Q05BM2;Q5BJ26;M0QZD9 O60885 O60885 BRD4 Bromodomain-containing protein 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.0839 3 818.751472 2453.23259 70770.86 1.2885 0.0010549 0.13878 0.00011362 1.4273 0.0011686 819.08601394752 821.75721859516 90.378 0.29886 90.378 90.265 90.564 0 56 26 4 0 0 0 0.0057271 1 55818 33.665 33.665 1 0.62648 0.64861 0 11337000 5650400 5686900 565 1399 236 242 872 872 ADTTTPTTSAITASR 15 0 1 Unmodified _ADTTTPTTSAITASR_ 0 0 0 A0A024R8H6;Q15059;A0A140F1N4 A0A024R8H6 A0A024R8H6 BRD3 Bromodomain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.8784 2 747.375734 1492.73692 70865.24 0.6905 0.00051606 0.33104 0.00024741 1.0215 0.00076347 747.376157356525 752.379338535129 41.065 0.33853 41.065 40.956 41.295 -3.8147E-06 70 26 4 0 0 0 0.019711 2 21584 31.348 24.688 1 0.49214 0.51744 0 11288000 7549300 3739100 566 249 237 243 873;874 873 ADTTTPTTSAITASR 15 0 1 Unmodified _ADTTTPTTSAITASR_ 0 0 0 A0A024R8H6;Q15059;A0A140F1N4 A0A024R8H6 A0A024R8H6 BRD3 Bromodomain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.8779 2 747.375734 1492.73692 73656.7 0.77669 0.00058048 0.55585 0.00041543 1.3325 0.0009959 747.37569608709 752.882700740635 40.325 0.50436 40.325 40.041 40.545 0 76 43 4 0 0 0 0.00097261 1 21447 49.081 43.109 1 0.4663 0.46326 0 11891000 6926100 4964600 567 249 237 243 875 875 ADVDVQPYAFTTK 13 1 0 Unmodified _ADVDVQPYAFTTK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.8626 2 727.861731 1453.70891 72031.88 0.76584 0.00055743 -0.24816 -0.00018063 0.51768 0.0003768 727.861636274774 731.868691793447 78.992 0.71921 78.992 78.631 79.35 0 427 65 9 0 0 0 6.9588E-06 2 46672 103.91 99.382 1 1.188 1.3857 0 269670000 122030000 147640000 568 1183 238 244 876;877 876 ADVDVQPYAFTTK 13 1 0 Unmodified _ADVDVQPYAFTTK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.8693 2 727.861731 1453.70891 71905.67 0.66738 0.00048576 -0.10793 -7.8561E-05 0.55944 0.0004072 727.861742084587 731.868741270137 78.003 0.68079 78.003 77.699 78.379 0 359 57 9 0 0 0 1.2065E-23 2 47193 156.51 156.51 1 1.1771 1.3791 0 316100000 148780000 167320000 569 1183 238 244 878;879 879 ADVDVQPYAFTTK 13 1 0 Unmodified _ADVDVQPYAFTTK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 731.8693 2 727.861731 1453.70891 70707.66 0.57597 0.00041923 -0.26505 -0.00019292 0.31092 0.0002263 727.861683724186 731.86867511958 90.218 1.2259 90.218 89.687 90.913 0 428 80 9 0 0 0 0.00011522 2 49898 91.313 91.313 1 1.5523 1.3394 0 102520000 37745000 64772000 570 1183 238 244 880;881 881 ADVDVQPYAFTTK 13 1 0 Unmodified _ADVDVQPYAFTTK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.8694 2 727.861731 1453.70891 71679.32 0.46342 0.00033731 -0.28722 -0.00020905 0.17621 0.00012825 727.861742472356 731.868684194651 90.171 1.2667 90.171 89.751 91.018 0 404 78 9 0 0 0 9.028E-06 2 49073 101.3 101.3 1 1.5691 1.3365 0 87297000 31415000 55882000 571 1183 238 244 882;883 883 ADVEEEFLAFR 11 0 1 Unmodified _ADVEEEFLAFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.327 2 663.322242 1324.62993 75561.11 1.0461 0.00069392 0.17472 0.0001159 1.2208 0.00080982 663.322263860591 668.32642288079 108.76 0.75696 108.76 108.43 109.18 0 283 50 9 0 0 0 7.9364E-08 2 67859 112.75 112.75 1 1.765 1.9683 0 84303000 29611000 54691000 572 1569 239 245 884;885 884 ADVEEEFLAFR 11 0 1 Unmodified _ADVEEEFLAFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3267 2 663.322242 1324.62993 75521.43 0.66587 0.00044169 0.18981 0.0001259 0.85568 0.00056759 663.32225965792 668.326388747576 108.23 0.7244 108.23 107.86 108.59 0 309 50 8 0 0 0 8.5874E-11 2 69051 136.63 136.63 1 1.7143 1.9879 0 65521000 22894000 42627000 573 1569 239 245 886;887 886 ADVEEEFLAFR 11 0 1 Unmodified _ADVEEEFLAFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.3271 2 663.322242 1324.62993 74869.65 0.61075 0.00040512 0.35161 0.00023323 0.96235 0.00063835 663.322328124962 668.326485194706 120.06 0.56485 120.06 119.84 120.4 7.6294E-06 121 24 7 0 0 0 8.7899E-06 2 71133 109.29 109.29 1 3.2084 2.6294 0 16710000 3572600 13137000 574 1569 239 245 888;889 888 ADVEEEFLAFR 11 0 1 Unmodified _ADVEEEFLAFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.3266 2 663.322242 1324.62993 75007.45 0.75819 0.00050293 0.073541 4.8781E-05 0.83174 0.00055171 663.322132809522 668.326366009632 119.88 0.50603 119.88 119.65 120.16 0 114 20 8 0 0 0 9.8957E-09 2 70120 123.86 113.63 1 3.2669 2.7717 0 18804000 4235000 14569000 575 1569 239 245 890;891 890 ADVEEEFLAFRK 12 1 1 Unmodified _ADVEEEFLAFRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.3826 2 727.369724 1452.72489 74645.29 0.44937 0.00032686 0.53177 0.0003868 0.98115 0.00071366 727.870332888017 736.381495608637 100.97 0.44134 100.97 100.74 101.18 0 78 29 5 0 0 0 0.036355 1 57170 38.478 38.478 1 3.3589 3.0358 0 1880200 458170 1422100 576 1569 240 246 892 892 ADVEEEFLALR 11 0 1 Unmodified _ADVEEEFLALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3349 2 646.330067 1290.64558 75285.77 0.88223 0.00057021 -0.033284 -2.1512E-05 0.84895 0.0005487 646.329976026387 651.334274012719 106.58 1.9688 106.58 105.49 107.46 -7.6294E-06 687 148 11 0 0 0 5.8184E-23 2 66343 168.83 168.83 1 1.7782 2.1062 0 432300000 162480000 269820000 577 1569 241 247 893;894 894 ADVEEEFLALR 11 0 1 Unmodified _ADVEEEFLALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3306 2 646.330067 1290.64558 75788.38 0.92299 0.00059655 0.00018167 1.1742E-07 0.92317 0.00059667 646.330041768783 651.334178874877 105.95 1.2904 105.95 105.35 106.64 0 614 95 11 0 0 0 5.8184E-23 3 67101 168.83 168.83 1 1.6541 1.9382 0 722980000 265580000 457400000 578 1569 241 247 895;896;897 896 ADVEEEFLALR 11 0 1 Unmodified _ADVEEEFLALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3349 2 646.330067 1290.64558 75025.88 0.95554 0.0006176 -0.10209 -6.5986E-05 0.85345 0.00055161 646.329895991874 651.334194027661 118.1 0.93228 118.1 117.75 118.68 -7.6294E-06 244 39 10 0 0 0 9.881E-23 2 69554 163.94 163.94 1 3.3099 2.8625 0 116610000 29440000 87175000 579 1569 241 247 898;899 898 ADVEEEFLALR 11 0 1 Unmodified _ADVEEEFLALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.3348 2 646.330067 1290.64558 74488.61 0.5784 0.00037384 -0.12258 -7.9229E-05 0.45582 0.00029461 646.329853261596 651.334150648403 117.97 1.3287 117.97 117.56 118.88 0 292 64 11 0 0 0 9.881E-23 2 68531 163.94 163.94 1 3.1045 2.7102 0 107280000 27000000 80282000 580 1569 241 247 900;901 900 ADVEEEFLALRK 12 1 1 Unmodified _ADVEEEFLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.3876 2 710.377549 1418.74054 71534.46 0.89971 0.00063913 0.38058 0.00027035 1.2803 0.00090948 710.377702470102 719.388955575616 85.437 0.94463 85.437 85.097 86.042 0 382 78 8 0 0 0 0.0013396 1 51164 65.627 59.592 1 1.9015 2.2931 0 129240000 45179000 84064000 581 1569 242 248 902 902 ADVEEEFLALRK 12 1 1 Unmodified _ADVEEEFLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.9284 3 473.920791 1418.74054 87976.4 0.36883 0.0001748 0.071163 3.3726E-05 0.43999 0.00020852 473.921083360527 479.928064038957 85.459 0.97369 85.459 85.097 86.071 0 424 81 8 0 0 0 0.021649 1 51229 25.914 18.745 1 1.8347 2.2155 0 159080000 57778000 101310000 582 1569 242 248 903 903 ADVEEEFLALRK 12 1 1 Unmodified _ADVEEEFLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.3896 2 710.377549 1418.74054 71335.55 0.71293 0.00050645 0.15687 0.00011144 0.8698 0.00061789 710.37754960659 719.388806384352 84.166 0.90917 84.166 83.921 84.831 0 349 74 7 0 0 0 2.0417E-12 2 51555 129.89 129.89 1 1.8159 2.1446 0 141240000 47501000 93736000 583 1569 242 248 904;905 904 ADVEEEFLALRK 12 1 1 Unmodified _ADVEEEFLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.2554 3 473.920791 1418.74054 87234.39 0.19537 9.2588E-05 -0.018051 -8.5547E-06 0.17732 8.4034E-05 473.920925320311 479.928147327112 84.167 0.91869 84.167 83.912 84.831 -7.6294E-06 407 75 8 0 0 0 0.00018406 2 51672 55.314 45.262 1 1.8699 2.2101 0 159710000 55362000 104350000 584 1569 242 248 906;907 907 ADVEEEFLALRK 12 1 1 Unmodified _ADVEEEFLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.3783 2 710.377549 1418.74054 71917.42 0.7398 0.00052554 -0.05954 -4.2296E-05 0.68026 0.00048324 710.37752488248 719.388689140685 97.818 1.2397 97.818 97.387 98.626 -7.6294E-06 417 78 8 0 0 0 0.015397 2 54982 47.288 47.288 1 3.7696 3.3354 0 45899000 9650700 36248000 585 1569 242 248 908;909 909 ADVEEEFLALRK 12 1 1 Unmodified _ADVEEEFLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.39 2 710.377549 1418.74054 71931.76 0.59208 0.0004206 0.29728 0.00021118 0.88935 0.00063178 710.377807673548 719.388904729226 97.649 1.2831 97.649 97.23 98.513 0 364 75 8 0 0 0 1.7645E-12 2 54017 130.98 114.77 1 3.688 3.1415 0 45484000 9042100 36442000 586 1569 242 248 910;911 910 ADVEEESLALR 11 0 1 Unmodified _ADVEEESLALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.3126 2 616.311874 1230.6092 76484.02 0.38971 0.00024018 0.3105 0.00019137 0.70021 0.00043155 616.312046472706 621.316057548645 64.496 1.0097 64.496 63.991 65.001 0 503 85 8 0 0 0 1.5223E-12 2 36989 143.89 92.831 1 1.59 1.8808 0 300590000 111890000 188700000 587 1569 243 249 912;913 913 ADVEEESLALR 11 0 1 Unmodified _ADVEEESLALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.3161 2 616.311874 1230.6092 76178.83 0.47514 0.00029283 0.49547 0.00030536 0.97061 0.0005982 616.312092402933 621.31613913476 63.398 1.0905 63.398 62.87 63.961 0 513 94 9 0 0 0 1.0554E-10 2 37075 136.32 95.296 1 1.6136 1.857 0 211700000 83296000 128410000 588 1569 243 249 914;915 914 ADVEEESLALR 11 0 1 Unmodified _ADVEEESLALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.3118 2 616.311874 1230.6092 76451.98 0.57993 0.00035742 0.039215 2.4169E-05 0.61915 0.00038159 616.311856556257 621.315951743401 74.385 1.0667 74.385 73.854 74.921 0 419 72 10 0 0 0 7.4243E-05 1 39423 98.249 63.996 1 3.2258 2.7304 0 31151000 8048200 23103000 589 1569 243 249 916 916 ADVEEESLALR 11 0 1 Unmodified _ADVEEESLALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.3159 2 616.311874 1230.6092 76509.59 0.38613 0.00023798 0.29849 0.00018396 0.68463 0.00042194 616.311970190918 621.316103026893 74.755 1.1907 74.755 74.256 75.447 0 356 76 9 0 0 0 0.00040176 2 38739 81.338 59.252 1 2.8427 2.4798 0 25806000 6178800 19628000 590 1569 243 249 917;918 917 ADVEEESLALRK 12 1 1 Unmodified _ADVEEESLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.8616 2 680.359356 1358.70416 73234.36 0.57176 0.000389 0.3753 0.00025534 0.94706 0.00064434 680.359636736485 689.370784405183 43.433 0.444 43.433 43.112 43.556 0 202 37 7 0 0 0 6.766E-05 2 23150 99.283 99.283 1 1.9145 2.3049 0 99268000 34522000 64746000 591 1569 244 250 919;920 920 ADVEEESLALRK 12 1 1 Unmodified _ADVEEESLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.9164 3 453.908663 1358.70416 87174.1 0.18293 8.3032E-05 0.065495 2.9729E-05 0.24842 0.00011276 453.908712774864 459.916192281283 43.46 0.68061 43.46 43.126 43.806 0 204 57 6 0 0 0 0.0031669 1 23210 34 28.537 1 2.0119 2.4198 0 85893000 29087000 56805000 592 1569 244 250 921 921 ADVEEESLALRK 12 1 1 Unmodified _ADVEEESLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.3513 2 680.359356 1358.70416 73326.8 0.85017 0.00057842 -0.33885 -0.00023054 0.51131 0.00034788 680.359262871805 689.370198031977 43.603 0.40741 43.603 43.556 43.964 -3.8147E-06 155 35 6 0 0 0 0.01167 1 23483 55.806 55.806 1 1.3882 1.6716 0 102300000 36488000 65809000 593 1569 244 250 922 922 ADVEEESLALRK 12 1 1 Unmodified _ADVEEESLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3704 2 680.359356 1358.70416 73207.67 0.85457 0.00058142 -0.11684 -7.949E-05 0.73774 0.00050193 680.359409693684 689.370421864674 42.614 0.63419 42.614 42.401 43.035 -3.8147E-06 286 51 8 0 0 0 5.1466E-18 2 22936 147.3 104.13 1 1.5677 1.8604 0 301060000 105780000 195280000 594 1569 244 250 923;924 924 ADVEEESLALRK 12 1 1 Unmodified _ADVEEESLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.9161 3 453.908663 1358.70416 87530.39 0.47288 0.00021465 -0.022489 -1.0208E-05 0.45039 0.00020444 453.908755928435 459.916060955146 42.605 0.74095 42.605 42.281 43.022 -3.8147E-06 301 57 9 0 0 0 0.00021562 2 22942 57.567 52.352 1 1.6641 1.9716 0 232970000 81012000 151960000 595 1569 244 250 925;926 925 ADVEEESLALRK 12 1 1 Unmodified _ADVEEESLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.371 2 680.359356 1358.70416 72884.43 0.39698 0.00027009 0.16661 0.00011335 0.56359 0.00038344 680.359643581255 689.370648099848 50.681 1.2962 50.681 50.364 51.66 3.8147E-06 377 92 10 0 0 0 0.00039441 2 24790 85.958 85.958 1 3.5446 3.1533 0 60116000 12639000 47477000 596 1569 244 250 927;928 927 ADVEEESLALRK 12 1 1 Unmodified _ADVEEESLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 459.9164 3 453.908663 1358.70416 88104.98 0.10242 4.6487E-05 -0.070058 -3.18E-05 0.032357 1.4687E-05 453.908902711821 459.916063219067 50.681 0.78605 50.681 50.327 51.113 0 280 54 9 0 0 0 0.011845 2 24820 32.295 32.295 1 3.4818 3.0597 0 32496000 7038700 25457000 597 1569 244 250 929;930 929 ADVEEESLALRK 12 1 1 Unmodified _ADVEEESLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3707 2 680.359356 1358.70416 73416.93 0.29577 0.00020123 0.0036619 2.4914E-06 0.29943 0.00020372 680.359415940586 689.370578210651 51.049 1.2166 51.049 50.687 51.904 0 363 81 10 0 0 0 0.0049963 2 24412 57.203 52.904 1 3.3281 2.8351 0 46337000 11103000 35234000 598 1569 244 250 931;932 931 ADVEEESLALRK 12 1 1 Unmodified _ADVEEESLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 459.9162 3 453.908663 1358.70416 87930.43 -0.21305 -9.6704E-05 0.0035508 1.6117E-06 -0.2095 -9.5092E-05 453.908736308613 459.916104860073 51.048 0.76662 51.048 50.73 51.496 0 269 47 10 0 0 0 0.0018939 1 24428 54.343 54.343 1 3.5281 2.9962 0 24472000 5137000 19335000 599 1569 244 250 933 933 ADVEGELLACR 11 0 1 Unmodified _ADVEGELLACR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8051 2 616.80062 1231.58669 76494.07 0.65339 0.00040301 -0.26005 -0.0001604 0.39334 0.00024261 616.800373104185 621.804660140011 70.356 1.1312 70.356 70.018 71.149 0 442 94 6 0 0 0 3.8072E-05 1 40781 99.815 94.333 1 1.7612 1.9571 0 73137000 28568000 44569000 600 1569 245 251 934 934 ADVEGELLACR 11 0 1 Unmodified _ADVEGELLACR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.8053 2 616.80062 1231.58669 76856.55 0.38422 0.00023698 -0.17887 -0.00011033 0.20535 0.00012666 616.800518096814 621.804767301868 69.188 1.1865 69.188 68.829 70.016 0 466 98 6 0 0 0 0.00013444 2 41498 95.642 84.478 1 1.5804 1.8105 0 84142000 29942000 54200000 601 1569 245 251 935;936 935 ADVEGELLACR 11 0 1 Unmodified _ADVEGELLACR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.8049 2 616.80062 1231.58669 74119.7 0.35899 0.00022142 -0.16707 -0.00010305 0.19192 0.00011838 616.800508050956 621.804679609315 80.628 1.0251 80.628 80.382 81.407 0 353 69 9 0 0 0 0.000286 1 43517 89.08 84.467 1 3.4697 2.9845 0 48854000 11137000 37716000 602 1569 245 251 937 937 ADVEGELLACR 11 0 1 Unmodified _ADVEGELLACR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.8052 2 616.80062 1231.58669 74904.93 0.57527 0.00035483 -0.36357 -0.00022425 0.2117 0.00013058 616.800430036058 621.804583969252 80.934 0.97862 80.934 80.69 81.669 0 313 59 8 0 0 0 0.0036568 2 42852 59.426 55.409 1 3.5 3.053 0 41540000 8015900 33524000 603 1569 245 251 938;939 938 ADVIQATGDAICIFR 15 0 1 Unmodified _ADVIQATGDAICIFR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.9252 2 825.419422 1648.82429 65498.06 0.95433 0.00078772 0.90781 0.00074932 1.8621 0.001537 825.419139491332 830.423582154079 113.96 1.0625 113.96 113.3 114.36 0 615 77 14 0 0 0 4.0834E-23 2 72123 150.06 130.81 1 0.6981 0.81171 0 182060000 103400000 78669000 604 167 246 252 940;941 941 ADVIQATGDAICIFR 15 0 1 Unmodified _ADVIQATGDAICIFR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 825.4185 2 825.419422 1648.82429 66236.12 0.79631 0.00065729 1.0138 0.00083684 1.8101 0.0014941 825.419137905072 830.423621952946 113.46 0.85832 113.46 113.02 113.88 0 588 60 15 0 0 0 2.2745E-10 2 73474 119.39 109.5 1 0.66812 0.76563 0 173040000 107850000 65186000 605 167 246 252 942;943 942 ADVIQATGDAICIFR 15 0 1 Unmodified _ADVIQATGDAICIFR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 825.4207 2 825.419422 1648.82429 65105.26 0.90195 0.00074449 0.4543 0.00037499 1.3563 0.0011195 825.41948168345 830.423641142922 125.18 1.1386 125.18 124.68 125.82 0 306 47 12 0 0 0 2.093E-05 2 75046 87.216 87.216 1 0.97665 0.84329 0 90461000 42812000 47649000 606 167 246 252 944;945 944 ADVIQATGDAICIFR 15 0 1 Unmodified _ADVIQATGDAICIFR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 830.4241 2 825.419422 1648.82429 65940.66 0.91126 0.00075217 0.4079 0.00033669 1.3192 0.0010889 825.419564607756 830.42367297695 125.09 0.75316 125.09 124.72 125.47 0 202 33 8 0 0 0 2.3373E-15 2 74099 132.5 122.55 1 0.92663 0.80892 0 105040000 53478000 51562000 607 167 246 252 946;947 947 ADVLSGENAYMCAK 14 1 0 Oxidation (M) _ADVLSGENAYM(ox)CAK_ ADVLSGENAYM(1)CAK ADVLSGENAYM(42.24)CAK 0 1 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7EMM6 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.3833 2 772.839616 1543.66468 70791.7 1.036 0.00080064 -0.53319 -0.00041207 0.50278 0.00038857 773.341257720723 776.846123161616 48.766 0.34641 48.766 48.558 48.904 0 78 24 5 0 0 0 0.052649 1 26596 42.243 35.71 1 1.7083 1.6811 0 8635800 2781500 5854200 608 260 247 253 948 948 194 ADVQAVVSAVTLLR 14 0 1 Unmodified _ADVQAVVSAVTLLR_ 0 0 0 A8K4P8;Q14146 A8K4P8 A8K4P8 URB2 Unhealthy ribosome biogenesis protein 2 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.9288 2 721.422291 1440.83003 NaN NaN NaN 0.89711 0.0006472 NaN NaN NaN NaN 120.36 0.31673 120.36 120.18 120.5 0 0 0 0 3.5632E-06 1 77581 97.911 86.76 1 NaN NaN 0 3956600 0 3956600 609 738 248 254 949 949 ADVQAVVSAVTLLR 14 0 1 Unmodified _ADVQAVVSAVTLLR_ 0 0 0 A8K4P8;Q14146 A8K4P8 A8K4P8 URB2 Unhealthy ribosome biogenesis protein 2 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.4297 2 721.422291 1440.83003 NaN NaN NaN 0.97576 0.00070394 NaN NaN NaN NaN 119.83 0.30613 119.83 119.68 119.99 0 0 0 0 0.00024737 1 79081 83.314 71.267 1 NaN NaN 0 5063500 0 5063500 610 738 248 254 950 950 ADVQSIIGLQR 11 0 1 Unmodified _ADVQSIIGLQR_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.3458 2 600.340769 1198.66699 NaN NaN NaN 0.68947 0.00041391 NaN NaN NaN NaN 84.653 0.67607 84.653 84.37 85.046 0 0 0 0 5.9068E-12 1 50658 125.48 56.745 1 NaN NaN 0 81998000 0 81998000 611 862 249 255 951 951 ADVQSIIGLQR 11 0 1 Unmodified _ADVQSIIGLQR_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.3453 2 600.340769 1198.66699 79200.84 0.88227 0.00052966 0.13566 8.144E-05 1.0179 0.0006111 600.340778221964 605.34490459271 83.638 0.7018 83.638 83.325 84.027 0 250 57 6 0 0 0 5.9798E-13 2 51192 147.95 69.612 1 1.8113 2.0624 0 130100000 44082000 86015000 612 862 249 255 952;953 952 ADVQSIIGLQR 11 0 1 Unmodified _ADVQSIIGLQR_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.3453 2 600.340769 1198.66699 77743.33 0.82422 0.00049481 0.060144 3.6107E-05 0.88436 0.00053092 600.34065896817 605.344958672003 96.568 0.69034 96.568 96.279 96.97 0 151 40 4 0 0 0 2.2671E-05 2 54169 103.88 46.02 1 1.4361 1.1976 0 10566000 3882200 6683400 613 862 249 255 954;955 954 ADVQSIIGLQR 11 0 1 Unmodified _ADVQSIIGLQR_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.3458 2 600.340769 1198.66699 77796.7 0.43608 0.0002618 -0.18672 -0.0001121 0.24936 0.0001497 600.34049020621 605.344822002374 96.467 0.92817 96.467 96.203 97.131 0 169 48 7 0 0 0 1.9293E-05 1 53289 105.2 47.337 1 1.4134 1.1464 0 11990000 4666800 7323400 614 862 249 255 956 956 ADYTSHLR 8 0 1 Unmodified _ADYTSHLR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7432 2 481.738148 961.461744 92072.94 0.13574 6.5392E-05 0.2981 0.00014361 0.43384 0.000209 481.738261117179 486.742283463913 21.414 0.36825 21.414 21.258 21.626 0 60 18 4 0 0 0 0.020993 1 7728 58.119 40.353 1 1.3225 1.3727 0 10406000 4025800 6379700 615 1205 250 256 957 957 AEAAGLIGWLK 11 1 0 Unmodified _AEAAGLIGWLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8243 2 564.824224 1127.63389 82740.8 0.76248 0.00043067 0.1387 7.8339E-05 0.90117 0.00050901 564.824141735298 568.831520012005 110.07 0.53208 110.07 109.83 110.36 0 113 35 5 0 0 0 0.00024958 1 69018 90.657 82.717 1 1.1331 1.1372 0 18649000 7354300 11295000 616 1392 251 257 958 958 AEAAGLIGWLK 11 1 0 Unmodified _AEAAGLIGWLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.832 2 564.824224 1127.63389 80452.2 0.83736 0.00047296 -0.13975 -7.8937E-05 0.6976 0.00039402 564.823889100102 568.831405611023 121.43 0.35732 121.43 121.23 121.58 0 49 15 5 0 0 0 0.0015533 2 72257 66.621 63.643 1 1.3947 1.0846 0 3661800 1505900 2155900 617 1392 251 257 959;960 959 AEAAGLIGWLK 11 1 0 Unmodified _AEAAGLIGWLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.8314 2 564.824224 1127.63389 80626.37 0.71143 0.00040183 -0.095621 -5.4009E-05 0.61581 0.00034783 564.824024375687 568.831495848542 121.18 0.44607 121.18 120.93 121.37 0 50 21 4 0 0 0 0.0017252 2 71145 65.305 63.151 1 1.3476 1.0837 0 2497300 924360 1573000 618 1392 251 257 961;962 961 AEAEAQAEELSFPR 14 0 1 Unmodified _AEAEAQAEELSFPR_ 0 0 0 A0A024R5C5;P11498;E9PS68 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.8735 2 774.370452 1546.72635 70238.48 0.66619 0.00051588 0.22277 0.00017251 0.88896 0.00068839 774.370219584983 779.374577384619 74.964 0.56046 74.964 74.695 75.255 0 169 45 6 0 0 0 2.8672E-09 2 43880 114.86 114.86 1 1.3019 1.3653 0 12205000 6201400 6003900 619 176 252 258 963;964 963 AEAEAQAEELSFPR 14 0 1 Unmodified _AEAEAQAEELSFPR_ 0 0 0 A0A024R5C5;P11498;E9PS68 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.8755 2 774.370452 1546.72635 70435.75 0.59105 0.00045769 0.41663 0.00032262 1.0077 0.00078031 774.87298651101 779.876235002816 73.896 0.46822 73.896 73.633 74.101 0 198 36 7 0 0 0 1.1844E-14 3 44278 134.13 129.03 1 1.4344 1.4378 0 18103000 7021700 11082000 620 176 252 258 965;966;967 965 AEAEAWYQTK 10 1 0 Unmodified _AEAEAWYQTK_ 0 0 0 CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729;CON__Q5XKE5;Q5XKE5 CON__P08729;CON__Q3KNV1;CON__Q5XKE5 CON__Q3KNV1 KRT7;KRT79 Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 79 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.7831 2 598.782753 1195.55095 78054.77 0.75713 0.00045336 0.43695 0.00026164 1.1941 0.000715 598.782964423173 602.790000793481 42.262 1.0145 42.262 42.01 43.024 3.8147E-06 299 80 9 0 0 0 6.0122E-65 3 22480 214.05 214.05 1 0.92797 1.0521 0 157200000 81372000 75827000 + 621 1171;1158;1175 253 259 968;969;970 970 AEAEAWYQTK 10 1 0 Unmodified _AEAEAWYQTK_ 0 0 0 CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729;CON__Q5XKE5;Q5XKE5 CON__P08729;CON__Q3KNV1;CON__Q5XKE5 CON__Q3KNV1 KRT7;KRT79 Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 79 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.7899 2 598.782753 1195.55095 78704.46 0.90031 0.00053909 0.55391 0.00033167 1.4542 0.00087076 598.783256032505 602.789902924241 41.38 1.2093 41.38 40.84 42.049 0 346 103 5 0 0 0 1.2241E-05 2 21993 103.55 103.55 1 0.91969 0.94578 0 32316000 14225000 18091000 + 622 1171;1158;1175 253 259 971;972 972 AEAEAWYQTK 10 1 0 Unmodified _AEAEAWYQTK_ 0 0 0 CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729;CON__Q5XKE5;Q5XKE5 CON__P08729;CON__Q3KNV1;CON__Q5XKE5 CON__Q3KNV1 KRT7;KRT79 Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 79 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.7828 2 598.782753 1195.55095 78221.2 0.37378 0.00022381 0.65045 0.00038948 1.0242 0.00061329 598.783437333629 602.790327247075 48.868 1.2393 48.868 48.357 49.597 0 310 100 5 0 0 0 0.024874 3 23954 44.863 41.54 1 1.2037 0.94875 0 5863700 2550300 3313400 + 623 1171;1158;1175 253 259 973;974;975 975 AEAEAWYQTK 10 1 0 Unmodified _AEAEAWYQTK_ 0 0 0 CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729;CON__Q5XKE5;Q5XKE5 CON__P08729;CON__Q3KNV1;CON__Q5XKE5 CON__Q3KNV1 KRT7;KRT79 Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 79 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.7825 2 598.782753 1195.55095 80337.34 0.30331 0.00018162 0.73334 0.00043911 1.0367 0.00062073 598.783470962886 603.291465067372 49.107 1.1087 49.107 48.724 49.832 -3.8147E-06 285 84 5 0 0 0 0.033135 1 23265 41.54 41.54 1 1.1125 0.87662 0 3247700 2060600 1187100 + 624 1171;1158;1175 253 259 976 976 AEAELLQQQK 10 1 0 Unmodified _AEAELLQQQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.3188 2 579.311677 1156.6088 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.353 1 34.353 33.853 34.853 0 0 0 0 0.037554 1 17181 47.869 31.093 1 625 1754 254 260 977 977 AEAELLQQQK 10 1 0 Unmodified _AEAELLQQQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.3185 2 579.311677 1156.6088 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.485 1 33.485 32.985 33.985 0 0 0 0 0.00023059 1 16785 78.516 57.068 1 626 1754 254 260 978 978 AEAESLYQSK 10 1 0 Unmodified _AEAESLYQSK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.2763 2 563.274761 1124.53497 NaN NaN NaN -0.34051 -0.0001918 NaN NaN NaN NaN 27.459 1.0314 27.459 27.1 28.132 0 0 0 0 2.5011E-08 1 12549 116.3 75.275 1 NaN NaN 0 552270000 552270000 0 + 627 1308;1309 255 261 979 979 AEAESLYQSK 10 1 0 Unmodified _AEAESLYQSK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.2753 2 563.274761 1124.53497 NaN NaN NaN -0.57871 -0.00032597 NaN NaN NaN NaN 26.981 0.99227 26.981 26.745 27.737 0 0 0 0 1.7074E-09 1 12265 118.18 83.925 1 NaN NaN 0 730030000 730030000 0 + 628 1308;1309 255 261 980 980 AEAESLYQSK 10 1 0 Unmodified _AEAESLYQSK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.2751 2 563.274761 1124.53497 NaN NaN NaN -0.33535 -0.0001889 NaN NaN NaN NaN 31.194 1.4837 31.194 30.829 32.313 -1.9073E-06 0 0 0 2.0377E-15 2 12992 131.62 106.04 1 NaN NaN 0 147850000 147850000 0 + 629 1308;1309 255 261 981;982 981 AEAESLYQSK 10 1 0 Unmodified _AEAESLYQSK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.2753 2 563.274761 1124.53497 NaN NaN NaN -0.51873 -0.00029218 NaN NaN NaN NaN 31.271 1.3778 31.271 30.93 32.308 0 0 0 0 0.012726 1 12561 60.518 40.732 1 NaN NaN 0 144400000 144400000 0 + 630 1308;1309 255 261 983 983 AEAESMYQIK 10 1 0 Oxidation (M) _AEAESM(ox)YQIK_ AEAESM(1)YQIK AEAESM(113.71)YQIK 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.2766 2 593.276446 1184.53834 78463.45 0.72681 0.0004312 0.048604 2.8835E-05 0.77541 0.00046004 593.276567032727 597.283648699073 28.995 0.4056 28.995 28.7 29.106 0 119 20 7 0 0 0 2.9338E-08 2 13764 113.71 43.451 1 1.5021 1.693 0 127500000 54408000 73088000 + 631 1156 256 262 984;985 985 862 AEAESMYQIK 10 1 0 Oxidation (M) _AEAESM(ox)YQIK_ AEAESM(1)YQIK AEAESM(132.76)YQIK 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.2768 2 593.276446 1184.53834 77145.87 0.73958 0.00043877 -0.17465 -0.00010362 0.56492 0.00033516 593.276526898551 597.283627816243 28.157 0.34901 28.157 28.025 28.374 1.9073E-06 61 15 9 0 0 0 5.93E-10 2 13392 132.76 45.854 1 1.3768 1.607 0 269730000 107560000 162170000 + 632 1156 256 262 986;987 987 862 AEAESMYQIK 10 1 0 Oxidation (M) _AEAESM(ox)YQIK_ AEAESM(1)YQIK AEAESM(46.39)YQIK 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.284 2 593.276446 1184.53834 78798 0.485 0.00028774 0.33428 0.00019832 0.81928 0.00048606 593.276565384042 597.283892477221 32.922 0.50783 32.922 32.559 33.067 -3.8147E-06 66 23 5 0 0 0 0.010213 1 13830 46.39 14.07 1 1.5465 1.2357 0 4131100 1720300 2410800 + 633 1156 256 262 988 988 862 AEAESMYQIK 10 1 0 Unmodified _AEAESMYQIK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.2878 2 585.278989 1168.54342 80572.09 0.92604 0.00054199 -0.36055 -0.00021102 0.56549 0.00033097 585.278468608481 589.285992647154 44.482 0.56997 44.482 44.219 44.789 0 103 47 4 0 0 0 0.0022794 1 24256 69.812 30.79 1 0.80358 0.83979 0 10907000 5332500 5574400 + 634 1156 256 263 989 989 AEAESMYQIK 10 1 0 Unmodified _AEAESMYQIK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.286 2 585.278989 1168.54342 79784.88 0.38694 0.00022647 0.15835 9.2679E-05 0.54529 0.00031915 585.279144436377 589.286075155978 52.643 0.58418 52.643 52.437 53.021 0 173 46 5 0 0 0 0.049193 1 26021 36.334 6.8607 1 2.3243 1.8645 0 2862200 870010 1992200 + 635 1156 256 263 990 990 AEAESMYQIK 10 1 0 Unmodified _AEAESMYQIK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.287 2 585.278989 1168.54342 79867.14 0.34858 0.00020401 0.37498 0.00021947 0.72355 0.00042348 585.279262218443 589.286085123361 53.066 0.72183 53.066 52.703 53.425 0 162 51 4 0 0 0 0.04172 1 25664 38.086 8.6132 1 2.3565 1.8438 0 3377200 1003000 2374200 + 636 1156 256 263 991 991 AEAESWYQTK 10 1 0 Unmodified _AEAESWYQTK_ 0 0 0 CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259 B2R853 KRT75;KRT6C;KRT6A Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.2809 2 606.78021 1211.54587 NaN NaN NaN 0.14811 8.9871E-05 NaN NaN NaN NaN 39.429 0.5907 39.429 39.046 39.637 0 0 0 0 0.010494 1 20250 62.823 48.616 1 NaN NaN 0 23116000 23116000 0 + 637 859;1154;1147;1180 257 264 992 992 AEAESWYQTK 10 1 0 Unmodified _AEAESWYQTK_ 0 0 0 CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259 B2R853 KRT75;KRT6C;KRT6A Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.7802 2 606.78021 1211.54587 NaN NaN NaN 0.31597 0.00019173 NaN NaN NaN NaN 38.322 0.44998 38.322 38.12 38.57 0 0 0 0 1.6267E-39 1 20079 172.23 135.84 1 NaN NaN 0 39773000 39773000 0 + 638 859;1154;1147;1180 257 264 993 993 AEAESWYQTK 10 1 0 Unmodified _AEAESWYQTK_ 0 0 0 CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259 B2R853 KRT75;KRT6C;KRT6A Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.7808 2 606.78021 1211.54587 NaN NaN NaN 0.21721 0.0001318 NaN NaN NaN NaN 45.181 0.50859 45.181 44.936 45.445 0 0 0 0 0.027002 1 21492 52.79 47.849 1 NaN NaN 0 3193600 3193600 0 + 639 859;1154;1147;1180 257 264 994 994 AEAETLPSLSITK 13 1 0 Unmodified _AEAETLPSLSITK_ 0 0 0 Q5TB52;B4DWB5;O95340 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3795 2 680.371932 1358.72931 75725.34 0.47564 0.00032361 0.70831 0.00048191 1.1839 0.00080552 680.371651485262 684.37951791291 86.099 0.70266 86.099 85.677 86.38 0 213 58 6 0 0 0 5.9345E-06 2 51738 105.2 95.516 1 4.7462 5.1241 0 37027000 7260200 29767000 640 1044 258 265 995;996 995 AEAETLPSLSITK 13 1 0 Unmodified _AEAETLPSLSITK_ 0 0 0 Q5TB52;B4DWB5;O95340 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.8815 2 680.371932 1358.72931 75032.48 0.86926 0.00059142 0.24153 0.00016433 1.1108 0.00075575 680.371638411719 684.379132344366 85.177 0.68109 85.177 84.831 85.512 0 234 57 7 0 0 0 2.3956E-05 2 52307 98.898 89.466 1 4.478 4.9331 0 43195000 6945700 36249000 641 1044 258 265 997;998 997 AEAETLPSLSITK 13 1 0 Unmodified _AEAETLPSLSITK_ 0 0 0 Q5TB52;B4DWB5;O95340 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.3807 2 680.371932 1358.72931 NaN NaN NaN 0.38208 0.00025996 NaN NaN NaN NaN 98.657 0.5789 98.657 98.449 99.027 0 0 0 0 0.017004 1 55631 49.5 42.897 1 NaN NaN 0 1960300 0 1960300 642 1044 258 265 999 999 AEAETLPSLSITK 13 1 0 Unmodified _AEAETLPSLSITK_ 0 0 0 Q5TB52;B4DWB5;O95340 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.3745 2 680.371932 1358.72931 74749.75 0.71109 0.00048381 0.30654 0.00020856 1.0176 0.00069237 680.372113049741 684.379505844503 98.548 0.64661 98.548 98.289 98.936 7.6294E-06 123 38 5 0 0 0 0.011999 2 54770 39.917 39.917 1 2.3118 1.8739 0 2749300 726240 2023000 643 1044 258 265 1000;1001 1001 AEAGAEAEAEEENTNPSSSGSAHSVAK 27 1 0 Unmodified _AEAGAEAEAEEENTNPSSSGSAHSVAK_ 0 0 0 O43248;J3KMZ0 O43248 O43248 HOXC11 Homeobox protein Hox-C11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.7211 3 877.386468 2629.13758 65630.12 0.3887 0.00034104 0.18302 0.00016058 0.57171 0.00050161 877.720844894816 880.392804605069 25.575 0.27188 25.575 25.453 25.725 1.9073E-06 83 15 8 0 0 0 1.6886E-79 3 11133 171.72 169.98 1 0.57401 0.56218 0 22165000 15215000 6949800 644 1383 259 266 1002;1003;1004 1003 AEAGAEAEAEEENTNPSSSGSAHSVAK 27 1 0 Unmodified _AEAGAEAEAEEENTNPSSSGSAHSVAK_ 0 0 0 O43248;J3KMZ0 O43248 O43248 HOXC11 Homeobox protein Hox-C11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.7216 3 877.386468 2629.13758 64882.09 0.32289 0.0002833 -0.027831 -2.4418E-05 0.29506 0.00025888 877.720720517991 880.392197657753 25.248 0.26503 25.248 25.128 25.393 0 54 9 9 0 0 0 3.1406E-107 2 10870 194.21 193.18 1 0.63379 0.63863 0 27946000 15340000 12606000 645 1383 259 266 1005;1006 1005 AEAGAEAEAEEENTNPSSSGSAHSVAK 27 1 0 Unmodified _AEAGAEAEAEEENTNPSSSGSAHSVAK_ 0 0 0 O43248;J3KMZ0 O43248 O43248 HOXC11 Homeobox protein Hox-C11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 877.7213 3 877.386468 2629.13758 65294 0.37158 0.00032602 0.22386 0.00019641 0.59544 0.00052243 877.721130531481 880.392202666894 30.372 0.27358 30.372 30.231 30.505 0 134 16 11 0 0 0 0.026375 2 12549 16.4 16.399 1 1.1369 0.89558 0 10955000 5268700 5686400 646 1383 259 266 1007;1008 1008 AEAGAGSATEFQFR 14 0 1 Unmodified _AEAGAGSATEFQFR_ 0 0 0 P46783;Q59GE4;Q9NQ39 P46783 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.3444 2 721.338955 1440.66336 70745.37 0.46311 0.00033406 0.41909 0.00030231 0.8822 0.00063636 721.339175864726 726.343126145926 64.687 1.0707 64.687 64.242 65.313 0 614 94 10 0 0 0 7.4152E-05 3 37019 89.403 89.403 1 1.0517 1.2436 0 271370000 126870000 144490000 647 1573 260 267 1009;1010;1011 1010 AEAGAGSATEFQFR 14 0 1 Unmodified _AEAGAGSATEFQFR_ 0 0 0 P46783;Q59GE4;Q9NQ39 P46783 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.3436 2 721.338955 1440.66336 70437.95 0.64191 0.00046304 0.56077 0.0004045 1.2027 0.00086754 721.339187911968 726.343347277666 63.581 1.2335 63.581 63.066 64.299 0 621 108 10 0 0 0 1.7583E-09 3 37198 118.9 114.21 1 1.146 1.3227 0 242150000 114680000 127470000 648 1573 260 267 1012;1013;1014 1013 AEAGDNLGALVR 12 0 1 Unmodified _AEAGDNLGALVR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.3192 2 593.314751 1184.61495 77142.28 0.56397 0.00033461 0.2478 0.00014702 0.81177 0.00048164 593.314935588739 598.318948561493 68.792 1.098 68.792 68.219 69.317 0 424 96 5 0 0 0 5.1975E-13 2 39787 134.51 113.64 1 1.8359 2.0533 0 88011000 32950000 55061000 649 1580 261 268 1015;1016 1015 AEAGDNLGALVR 12 0 1 Unmodified _AEAGDNLGALVR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.319 2 593.314751 1184.61495 77926.28 0.53033 0.00031465 0.3039 0.00018031 0.83422 0.00049496 593.315245727418 598.318801429065 78.872 0.77372 78.872 78.525 79.299 0 207 45 8 0 0 0 0.00474 2 42245 52.725 45.794 1 1.4837 1.251 0 9682800 3841300 5841600 650 1580 261 268 1017;1018 1017 AEAGPEGVAPAPEGEK 16 1 0 Unmodified _AEAGPEGVAPAPEGEK_ 0 0 0 B7Z766;A0A087X054;B7Z2N4;B3KXH0;Q9Y4L1;B7Z602 B7Z766 B7Z766 HYOU1 Hypoxia up-regulated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.8729 2 754.865002 1507.71545 NaN NaN NaN -0.10281 -7.7608E-05 NaN NaN NaN NaN 35.926 0.36475 35.926 35.743 36.108 0 0 0 0 2.4872E-06 1 18129 85.271 72.504 1 NaN NaN 0 3864900 0 3864900 651 443 262 269 1019 1019 AEAGPEGVAPAPEGEK 16 1 0 Unmodified _AEAGPEGVAPAPEGEK_ 0 0 0 B7Z766;A0A087X054;B7Z2N4;B3KXH0;Q9Y4L1;B7Z602 B7Z766 B7Z766 HYOU1 Hypoxia up-regulated protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.8655 2 754.865002 1507.71545 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.881 1 35.881 35.381 36.381 3.8147E-06 0 0 0 0.00095141 1 18102 65.895 48.87 1 652 443 262 269 1020 1020 AEAGPEGVAPAPEGEK 16 1 0 Unmodified _AEAGPEGVAPAPEGEK_ 0 0 0 B7Z766;A0A087X054;B7Z2N4;B3KXH0;Q9Y4L1;B7Z602 B7Z766 B7Z766 HYOU1 Hypoxia up-regulated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.8728 2 754.865002 1507.71545 71567.88 0.83659 0.00063151 0.29133 0.00021992 1.1279 0.00085142 754.865678297367 758.872240337732 35.072 0.34225 35.072 34.952 35.294 0 68 30 4 0 0 0 1.5606E-05 2 17864 86.467 86.467 1 1.2242 1.2754 0 11048000 4589200 6458900 653 443 262 269 1021;1022 1022 AEAGVPAEFSIWTR 14 0 1 Unmodified _AEAGVPAEFSIWTR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5C6;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.3901 2 767.388448 1532.76234 71268.12 0.63233 0.00048524 0.34642 0.00026584 0.97875 0.00075108 767.38946118998 772.392705774918 108.7 0.43781 108.7 108.4 108.84 0 84 29 5 0 0 0 0.0053616 2 69616 43.897 42.976 1 0.76341 0.76494 0 9143800 4474700 4669100 654 1504 263 270 1023;1024 1023 AEAGVPAEFSIWTR 14 0 1 Unmodified _AEAGVPAEFSIWTR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5C6;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.3919 2 767.388448 1532.76234 68596.9 0.57464 0.00044097 0.058951 4.5238E-05 0.63359 0.00048621 767.388920040679 772.392288668725 120.33 0.60557 120.33 120.09 120.7 -7.6294E-06 88 27 7 0 0 0 0.035603 1 71378 29.544 29.544 1 2.9595 2.5009 0 4855600 1398300 3457300 655 1504 263 270 1025 1025 AEALEDLVGFK 11 1 0 Unmodified _AEALEDLVGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.3176 2 596.316428 1190.6183 78794.18 0.70178 0.00041848 0.1462 8.7184E-05 0.84799 0.00050567 596.317721495121 600.323678761712 103.79 1.3057 103.79 103.35 104.65 7.6294E-06 735 107 10 0 0 0 0.00076687 2 63814 72.643 63.685 1 1.7121 1.9858 0 241760000 89138000 152620000 656 1569 264 271 1026;1027 1027 AEALEDLVGFK 11 1 0 Unmodified _AEALEDLVGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.3241 2 596.316428 1190.6183 78703.95 0.77591 0.00046269 0.42464 0.00025322 1.2005 0.00071591 596.318152499398 600.323766683352 103.1 1.4199 103.1 102.66 104.08 0 671 117 9 0 0 0 0.00092259 2 64888 71.451 63.408 1 1.7014 2.0021 0 385440000 142480000 242960000 657 1569 264 271 1028;1029 1028 AEALEDLVGFK 11 1 0 Unmodified _AEALEDLVGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.3167 2 596.316428 1190.6183 78954.22 1.0595 0.00063182 0.34856 0.00020785 1.4081 0.00083967 596.317158079201 600.323886566866 115.76 1.4999 115.76 115.16 116.66 0 288 66 13 0 0 0 0.0001992 2 67776 92.838 83.057 1 3.3025 2.867 0 133910000 31170000 102740000 658 1569 264 271 1030;1031 1031 AEALEDLVGFK 11 1 0 Unmodified _AEALEDLVGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.3243 2 596.316428 1190.6183 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.42 1 115.42 114.92 115.92 0 0 0 0 0.00050868 1 66705 75.378 55.592 1 659 1569 264 271 1032 1032 AEAQGSTTLLVSYR 14 0 1 Unmodified _AEAQGSTTLLVSYR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.3918 2 748.391187 1494.76782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.843 1 83.843 83.343 84.343 0 0 0 0 0.043949 1 44951 41.242 28.665 1 660 1937 265 272 1033 1033 AEAVVNTVDISER 13 0 1 Unmodified _AEAVVNTVDISER_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.8642 2 701.862263 1401.70997 72671.76 0.74178 0.00052063 -0.1567 -0.00010998 0.58509 0.00041065 701.861897533897 706.866398370032 63.758 0.69992 63.758 63.441 64.141 3.8147E-06 336 67 7 0 0 0 6.3161E-10 2 36534 124.67 124.67 1 0.82067 0.87981 0 46122000 23715000 22407000 661 1898 266 273 1034;1035 1034 AEAVVNTVDISER 13 0 1 Unmodified _AEAVVNTVDISER_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.8674 2 701.862263 1401.70997 71289.22 0.51505 0.0003615 0.37048 0.00026002 0.88553 0.00062152 701.862286020379 706.866905611775 62.741 0.62756 62.741 62.46 63.087 0 276 56 6 0 0 0 1.1168E-15 2 36908 137.89 137.89 1 0.90515 1.0082 0 43722000 23212000 20510000 662 1898 266 273 1036;1037 1037 AEAVVNTVDISER 13 0 1 Unmodified _AEAVVNTVDISER_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.8666 2 701.862263 1401.70997 74442.28 0.68594 0.00048144 -0.31852 -0.00022356 0.36742 0.00025788 701.86206898866 706.866129675399 73.55 0.612 73.55 73.257 73.869 0 263 47 8 0 0 0 8.5266E-06 2 38883 101.93 92.241 1 1.0489 0.88999 0 9247300 4377900 4869400 663 1898 266 273 1038;1039 1039 AEAVVNTVDISER 13 0 1 Unmodified _AEAVVNTVDISER_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 706.8665 2 701.862263 1401.70997 73150.57 0.50125 0.00035181 -0.13295 -9.331E-05 0.36831 0.0002585 701.862029312289 706.866231236645 74.054 0.56348 74.054 73.774 74.338 0 225 44 7 0 0 0 5.607E-05 2 38401 96.229 96.229 1 1.0515 0.85662 0 9611700 4781000 4830600 664 1898 266 273 1040;1041 1041 AEDCWELQISPELLAHGR 18 0 1 Unmodified _AEDCWELQISPELLAHGR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.0145 3 708.677472 2123.01059 72121.77 0.93816 0.00066485 -0.1342 -9.5104E-05 0.80396 0.00056975 709.011634116734 712.013723654138 121.23 0.35374 121.23 121.05 121.4 0 66 15 6 0 0 0 3.2889E-06 2 72086 77.506 73.153 1 1.2823 1.1024 0 6696800 4041000 2655800 665 1745 267 274 1042;1043 1042 AEDCWELQISPELLAHGR 18 0 1 Unmodified _AEDCWELQISPELLAHGR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.0131 3 708.677472 2123.01059 72697.88 0.74942 0.00053109 0.90593 0.00064201 1.6553 0.0011731 709.012255834469 712.349522511909 121.05 0.51625 121.05 120.72 121.23 -7.6294E-06 108 22 9 0 0 0 2.4609E-06 2 71007 79.013 75.726 1 1.3869 1.1276 0 9875200 4646000 5229200 666 1745 267 274 1044;1045 1044 AEDELLDLQDK 11 1 0 Unmodified _AEDELLDLQDK_ 0 0 0 A0A024RAC0;Q86V48;E5RFK8;Q05DE3 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.8248 2 644.81699 1287.61943 NaN NaN NaN 0.65244 0.0004207 NaN NaN NaN NaN 88.808 0.51105 88.808 88.509 89.02 0 0 0 0 0.038868 1 49040 47.559 27.772 1 NaN NaN 0 1708600 0 1708600 667 300 268 275 1046 1046 AEDELLDLQDK 11 1 0 Unmodified _AEDELLDLQDK_ 0 0 0 A0A024RAC0;Q86V48;E5RFK8;Q05DE3 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.3258 2 644.81699 1287.61943 NaN NaN NaN 0.88271 0.00056919 NaN NaN NaN NaN 88.884 0.63486 88.884 88.594 89.228 0 0 0 0 0.034871 1 48229 48.741 29.47 1 NaN NaN 0 1277800 0 1277800 668 300 268 275 1047 1047 AEDGSVIDYELIDQDAR 17 0 1 Unmodified _AEDGSVIDYELIDQDAR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YM50;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1 V9HW65 V9HW65 HEL-S-270;ANXA2 Annexin;Annexin A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.4544 2 954.944709 1907.87487 61711.62 0.60519 0.00057792 -0.28549 -0.00027262 0.3197 0.0003053 955.445297163106 959.949153568773 98.987 0.4778 98.987 98.762 99.24 0 156 38 6 0 0 0 6.5652E-05 2 60464 73.881 73.881 1 1.0843 1.138 0 11979000 5922700 6056300 669 193 269 276 1048;1049 1048 AEDGSVIDYELIDQDAR 17 0 1 Unmodified _AEDGSVIDYELIDQDAR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YM50;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1 V9HW65 V9HW65 HEL-S-270;ANXA2 Annexin;Annexin A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 954.9465 2 954.944709 1907.87487 62688.66 0.67652 0.00064604 -0.024492 -2.3389E-05 0.65203 0.00062265 954.944684961368 959.949228560863 98.376 0.50787 98.376 98.17 98.678 0 151 43 5 0 0 0 0.00013782 1 61561 74.987 74.987 1 0.99572 0.97725 0 14062000 5918200 8144100 670 193 269 276 1050 1050 AEDGSVIDYELIDQDAR 17 0 1 Unmodified _AEDGSVIDYELIDQDAR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YM50;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1 V9HW65 V9HW65 HEL-S-270;ANXA2 Annexin;Annexin A2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.9493 2 954.944709 1907.87487 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.227 1 98.227 97.727 98.727 -7.6294E-06 0 0 0 8.1002E-05 1 61430 81.494 73.77 1 671 193 269 276 1051 1051 AEDLVPTLVSR 11 0 1 Unmodified _AEDLVPTLVSR_ 0 0 0 F2Z2W7;Q8IZ69;H7C100 F2Z2W7 F2Z2W7 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.3395 2 600.335153 1198.65575 NaN NaN NaN 0.14343 8.6106E-05 NaN NaN NaN NaN 87.438 0.2421 87.438 87.323 87.565 0 0 0 0 0.016861 1 53919 54.066 15.29 1 NaN NaN 0 6080300 0 6080300 672 1254 270 277 1052 1052 AEDNADTLALVFEAPNQEK 19 1 0 Unmodified _AEDNADTLALVFEAPNQEK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1038.5027 2 1038.00002 2073.98548 58554.8 0.83031 0.00086186 0.11888 0.0001234 0.9492 0.00098527 1038.00119569743 1042.00703498765 111.35 0.6344 111.35 111.1 111.74 -7.6294E-06 236 45 7 0 0 0 3.243E-05 2 70054 54.898 54.898 1 0.61341 0.67996 0 58756000 36559000 22198000 673 1473 271 278 1053;1054 1053 AEDNADTLALVFEAPNQEK 19 1 0 Unmodified _AEDNADTLALVFEAPNQEK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1038.0051 2 1038.00002 2073.98548 58034.09 0.41336 0.00042907 0.33191 0.00034452 0.74528 0.0007736 1038.50226777707 1042.00721628134 110.81 0.6552 110.81 110.56 111.22 7.6294E-06 240 49 7 0 0 0 1.9512E-05 1 71586 62.077 62.077 1 0.64535 0.72332 0 54629000 30347000 24282000 674 1473 271 278 1055 1055 AEDNADTLALVFEAPNQEK 19 1 0 Unmodified _AEDNADTLALVFEAPNQEK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1038.002 2 1038.00002 2073.98548 58739.43 0.62265 0.00064631 0.11214 0.0001164 0.73479 0.00076271 1038.50069647611 1042.50864716944 122.66 0.78056 122.66 122.16 122.95 0 138 38 6 0 0 0 1.4397E-06 2 73173 85.469 85.469 1 0.46277 0.37086 0 20988000 14538000 6450000 675 1473 271 278 1056;1057 1057 AEDNADTLALVFEAPNQEK 19 1 0 Unmodified _AEDNADTLALVFEAPNQEK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1038.0013 2 1038.00002 2073.98548 58557.32 0.66778 0.00069315 -0.054995 -5.7085E-05 0.61278 0.00063607 1038.0010589478 1042.50868539349 122.51 0.86155 122.51 122.09 122.95 -7.6294E-06 156 43 6 0 0 0 1.204E-16 2 72187 116.06 116.06 1 0.45318 0.36383 0 17944000 12293000 5651500 676 1473 271 278 1058;1059 1059 AEDYEENLQVMR 12 0 1 Oxidation (M) _AEDYEENLQVM(ox)R_ AEDYEENLQVM(1)R AEDYEENLQVM(119.68)R 0 1 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.8392 2 756.835388 1511.65622 70024.84 0.86295 0.00065311 -0.57208 -0.00043297 0.29087 0.00022014 757.336737943408 761.839349199243 49.78 0.4616 49.78 49.553 50.014 0 103 33 5 0 0 0 1.2211E-08 2 27393 119.68 103.05 1 1.4643 1.5044 0 14271000 4170700 10101000 677 1312 272 279 1060;1061 1061 995 AEDYEENLQVMR 12 0 1 Oxidation (M) _AEDYEENLQVM(ox)R_ AEDYEENLQVM(1)R AEDYEENLQVM(82.75)R 0 1 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.8383 2 756.835388 1511.65622 69152.64 0.4588 0.00034723 -0.30825 -0.00023329 0.15055 0.00011394 756.835426725 761.839365418401 48.921 0.42039 48.921 48.704 49.125 0 154 34 6 0 0 0 0.00010643 2 27356 86.898 85.022 1 1.1739 1.2032 0 21025000 10780000 10245000 678 1312 272 279 1062;1063 1062 995 AEEAAPAAPPGPK 13 1 0 Unmodified _AEEAAPAAPPGPK_ 0 0 0 A0A0C4DGV8;A0A1S5UZH6;Q13214;B4DEK9;Q59FY7;Q6PI51 A0A0C4DGV8 A0A0C4DGV8 SEMA3B Semaphorin-3B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.3122 2 603.311677 1204.6088 79923.68 0.55677 0.0003359 0.13886 8.3778E-05 0.69563 0.00041968 603.311510606805 607.31904449776 31.644 0.38985 31.644 31.486 31.876 -1.9073E-06 79 21 7 0 0 0 0.016182 1 12950 36.585 36.585 1 0.98161 0.86376 0 1150400 558540 591860 679 518 273 280 1064 1064 AEEDEILNR 9 0 1 Unmodified _AEEDEILNR_ 0 0 0 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.7685 2 544.76456 1087.51457 81214.26 0.45338 0.00024699 0.41667 0.00022699 0.87005 0.00047397 544.764704843884 549.768660815649 39.667 0.58632 39.667 39.416 40.002 0 180 49 5 0 0 0 0.0011452 1 20549 89.355 81.415 1 1.2034 1.2311 0 32591000 15110000 17482000 680 1526 274 281 1065 1065 AEEDEILNR 9 0 1 Unmodified _AEEDEILNR_ 0 0 0 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.7691 2 544.76456 1087.51457 82146.13 0.50842 0.00027697 0.66501 0.00036227 1.1734 0.00063924 544.764558677397 549.769089364838 45.364 0.46535 45.364 45.14 45.606 0 123 32 5 0 0 0 0.055495 1 21633 36.557 32.81 1 0.69253 0.58043 0 3161600 1865100 1296500 681 1526 274 281 1066 1066 AEEDTQFNYHR 11 0 1 Unmodified _AEEDTQFNYHR_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;Q68EN4;H0Y7K8;Q5H934 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.3123 2 705.307655 1408.60076 74550.55 0.18913 0.00013339 0.24275 0.00017121 0.43188 0.00030461 705.307609423055 710.311646554046 29.863 0.26219 29.863 29.71 29.973 -1.9073E-06 68 18 6 0 0 0 0.038216 1 11733 37.556 37.155 1 1.2849 1.1085 0 1164800 473870 690960 682 1739 275 282 1067 1067 AEEELGELEAK 11 1 0 Unmodified _AEEELGELEAK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.3 2 609.298433 1216.58231 76750.12 0.28145 0.00017149 -0.25196 -0.00015352 0.029492 1.797E-05 609.29876764224 613.304857420872 52.785 0.73935 52.785 52.319 53.059 0 164 54 4 0 0 0 0.00033089 1 29378 86.898 86.898 1 0.88845 0.90643 0 17867000 9702600 8164000 683 803 276 283 1068 1068 AEEELGELEAK 11 1 0 Unmodified _AEEELGELEAK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.3046 2 609.298433 1216.58231 75334.35 0.31799 0.00019375 -0.54614 -0.00033276 -0.22815 -0.00013901 609.298846141584 613.304729523048 51.537 0.57632 51.537 51.189 51.765 0 159 45 5 0 0 0 0.00036932 2 29190 83.883 83.883 1 0.86098 0.88203 0 31845000 17476000 14369000 684 803 276 283 1069;1070 1069 AEEFVVLSQEPSVTETIAPK 20 1 0 Unmodified _AEEFVVLSQEPSVTETIAPK_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1092.0746 2 1087.56499 2173.11543 60425.85 0.27383 0.0002978 0.14256 0.00015504 0.41638 0.00045284 1088.06774908575 1092.07423202773 122 0.26286 122 121.83 122.09 7.6294E-06 39 13 5 0 0 0 0.022559 1 72720 22.991 18.522 1 2.0449 1.696 0 2292300 770110 1522200 685 1977 277 284 1071 1071 AEEFVVLSQEPSVTETIAPK 20 1 0 Unmodified _AEEFVVLSQEPSVTETIAPK_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1091.5712 2 1087.56499 2173.11543 60456.09 0.3403 0.0003701 -0.29447 -0.00032025 0.045835 4.9848E-05 1088.06614135897 1091.57174039043 121.82 0.25809 121.82 121.65 121.91 0 41 11 5 0 0 0 0.024103 1 71648 22.857 16.276 1 1.4236 1.1655 0 4896800 2183500 2713200 686 1977 277 284 1072 1072 AEEILEK 7 1 0 Unmodified _AEEILEK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2266 2 416.226551 830.438549 91327.53 0.14069 5.8558E-05 0.11897 4.9517E-05 0.25965 0.00010807 416.226522442491 420.233610431546 28.384 0.9004 28.384 28.059 28.96 0 333 57 9 0 0 0 0.022881 1 13302 91.626 24.592 1 0.85548 1.0136 0 463020000 238400000 224620000 687 1652 278 285 1073 1073 AEEILEK 7 1 0 Unmodified _AEEILEK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2265 2 416.226551 830.438549 92282.89 0.17319 7.2088E-05 -0.1222 -5.0862E-05 0.050995 2.1226E-05 416.22639401835 420.233538880944 27.863 0.61263 27.863 27.649 28.261 0 166 32 8 0 0 0 0.029647 1 13041 69.998 14.557 1 0.76123 0.89575 0 384740000 205160000 179580000 688 1652 278 285 1074 1074 AEEILEK 7 1 0 Unmodified _AEEILEK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 416.2273 2 416.226551 830.438549 91729.12 -0.39499 -0.00016441 0.95278 0.00039657 0.55779 0.00023217 416.227024751858 420.233952525122 31.613 1.1233 31.613 31.037 32.161 -1.9073E-06 329 66 9 0 0 0 0.058128 1 13301 51.335 10.763 1 1.1846 0.96683 0 32946000 15708000 17238000 689 1652 278 285 1075 1075 AEEITIPADVTPEK 14 1 0 Unmodified _AEEITIPADVTPEK_ 0 0 0 Q8IXI1;H3BUX4;H3BST5;I3L2C6 Q8IXI1 Q8IXI1 RHOT2 Mitochondrial Rho GTPase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.8976 2 756.893229 1511.7719 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.895 1 83.895 83.395 84.395 -7.6294E-06 0 0 0 0.0019366 1 50241 68.069 51.043 1 690 1893 279 286 1076 1076 AEEITIPADVTPER 14 0 1 Unmodified _AEEITIPADVTPER_ 0 0 0 H7BXZ6;Q8IXI2 H7BXZ6 H7BXZ6 RHOT1 Mitochondrial Rho GTPase;Mitochondrial Rho GTPase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.9005 2 770.896303 1539.77805 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.691 1 85.691 85.191 86.191 0 0 0 0 0.028871 1 51504 43.297 12.905 1 691 1310 280 287 1077 1077 AEEITIPADVTPER 14 0 1 Unmodified _AEEITIPADVTPER_ 0 0 0 H7BXZ6;Q8IXI2 H7BXZ6 H7BXZ6 RHOT1 Mitochondrial Rho GTPase;Mitochondrial Rho GTPase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.8998 2 770.896303 1539.77805 NaN NaN NaN 0.9822 0.00075717 NaN NaN NaN NaN 84.76 0.20708 84.76 84.611 84.818 7.6294E-06 0 0 0 0.015611 2 52025 48.284 30.848 1 NaN NaN 0 4426400 0 4426400 692 1310 280 287 1078;1079 1078 AEEIWQQSVIGDYLAR 16 0 1 Unmodified _AEEIWQQSVIGDYLAR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 939.9999 2 939.47324 1876.93193 65846.15 0.80461 0.00075591 0.84469 0.00079357 1.6493 0.0015495 939.474680416419 944.477973739366 116.44 0.41307 116.44 116.21 116.62 7.6294E-06 148 28 7 0 0 0 1.0883E-10 1 74261 93.011 84.907 1 0.60515 0.60504 0 16826000 10952000 5874000 693 1244 281 288 1080 1080 AEEIWQQSVIGDYLAR 16 0 1 Unmodified _AEEIWQQSVIGDYLAR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 944.0059 2 939.47324 1876.93193 65989.93 0.84535 0.00079419 0.6796 0.00063846 1.5249 0.0014326 939.47461080742 944.477735260673 115.9 0.40875 115.9 115.7 116.11 0 150 27 8 0 0 0 1.2588E-06 1 75642 73.082 53.983 1 0.53045 0.53158 0 18273000 11836000 6437400 694 1244 281 288 1081 1081 AEEIWQQSVIGDYLAR 16 0 1 Unmodified _AEEIWQQSVIGDYLAR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 939.9753 2 939.47324 1876.93193 63877.05 0.78893 0.00074117 0.35689 0.00033529 1.1458 0.0010765 939.974913141689 944.477193947835 127.9 0.37718 127.9 127.71 128.09 0 69 15 7 0 0 0 0.00015153 1 76251 62.14 52.088 1 1.0836 0.94993 0 3584000 1389000 2195000 695 1244 281 288 1082 1082 AEELGLPILGVLR 13 0 1 Unmodified _AEELGLPILGVLR_ 0 0 0 H7C131;Q8NCW8;B4DEN6;C9JDE9;A0A024R2M6;P09110 H7C131 H7C131 ACAA1 3-ketoacyl-CoA thiolase, peroxisomal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.4171 2 690.416477 1378.8184 75663.25 0.72208 0.00049854 -0.27004 -0.00018644 0.45205 0.0003121 690.416652838277 695.42017795645 130.03 0.31371 130.03 129.88 130.2 0 46 22 5 0 0 0 0.00032767 2 86897 64.297 64.297 1 1.7328 1.8679 0 3002000 1636000 1366000 696 116 282 289 1083;1084 1084 AEELGQELK 9 1 0 Unmodified _AEELGQELK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.7738 2 508.766571 1015.51859 79603.5 0.6274 0.0003192 0.19649 9.9966E-05 0.82388 0.00041916 508.766274219523 512.773546103869 38.614 0.6073 38.614 38.346 38.953 0 179 49 6 0 0 0 0.042514 1 19795 41.029 8.1885 1 1.0687 1.168 0 51138000 24140000 26999000 697 186;1747 283 290 1085 1085 AEELGQELK 9 1 0 Unmodified _AEELGQELK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 512.7741 2 508.766571 1015.51859 83581.48 0.44588 0.00022685 1.4214 0.00072314 1.8672 0.00094999 508.766640628971 512.773605273366 44.072 0.82799 44.072 43.71 44.538 0 336 56 10 0 0 0 0.0018366 2 20800 80.219 24.543 1 1.6959 1.3591 0 8386100 3348100 5038000 698 186;1747 283 290 1086;1087 1086 AEELGQELK 9 1 0 Unmodified _AEELGQELK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 508.7669 2 508.766571 1015.51859 83195.49 0.42625 0.00021686 1.8846 0.0009588 2.3108 0.0011757 508.766280118623 512.77358109358 44.103 0.82528 44.103 43.72 44.545 0 313 53 10 0 0 0 0.011379 2 20312 58.433 16.324 1 1.8733 1.5288 0 7936000 2673400 5262600 699 186;1747 283 290 1088;1089 1089 AEELHYPLGER 11 0 1 Unmodified _AEELHYPLGER_ 0 0 0 Q14257;H0YL43;A8MXP8 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.2248 3 438.554331 1312.64116 91241.66 0.22836 0.00010015 0.13954 6.1194E-05 0.3679 0.00016134 438.888568254871 441.890416996762 48.838 0.5215 48.838 48.584 49.106 0 168 39 6 0 0 0 0.042495 1 26644 23.468 20.044 1 1.5967 1.6723 0 39141000 14989000 24152000 700 1730 284 291 1090 1090 AEELHYPLGER 11 0 1 Unmodified _AEELHYPLGER_ 0 0 0 Q14257;H0YL43;A8MXP8 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.3265 2 657.327859 1312.64116 75756.38 0.67559 0.00044409 0.1295 8.5123E-05 0.80509 0.00052921 657.326464669234 662.331077245042 48.931 0.21297 48.931 48.857 49.07 0 59 17 6 0 0 0 0.0018238 1 26790 74.162 63.333 1 1.0436 1.0921 0 12839000 7382600 5456600 701 1730 284 291 1091 1091 AEELHYPLGER 11 0 1 Unmodified _AEELHYPLGER_ 0 0 0 Q14257;H0YL43;A8MXP8 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.8901 3 438.554331 1312.64116 90854.79 0.22922 0.00010052 0.11268 4.9414E-05 0.34189 0.00014994 438.554189830721 441.890458069181 47.239 0.3744 47.239 47.051 47.426 0 127 27 6 0 0 0 0.03228 1 26131 27.149 27.149 1 1.3537 1.5737 0 62782000 27408000 35374000 702 1730 284 291 1092 1092 AEELHYPLGER 11 0 1 Unmodified _AEELHYPLGER_ 0 0 0 Q14257;H0YL43;A8MXP8 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.3325 2 657.327859 1312.64116 74139.84 0.69831 0.00045902 0.15665 0.00010297 0.85496 0.00056199 657.327654589175 662.332295332101 47.232 0.24742 47.232 47.147 47.395 0 45 17 4 0 0 0 3.0231E-05 2 26199 117.7 78.393 1 1.5947 1.7431 0 36059000 14195000 21864000 703 1730 284 291 1093;1094 1094 AEEPSDLIGPEAPK 14 1 0 Unmodified _AEEPSDLIGPEAPK_ 0 0 0 Q8N5F7 Q8N5F7 Q8N5F7 NKAP NF-kappa-B-activating protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.8655 2 726.864471 1451.71439 70817.77 0.64112 0.000466 0.36755 0.00026716 1.0087 0.00073317 726.864907408901 730.872346154741 79.31 0.59841 79.31 79.041 79.639 -7.6294E-06 157 36 6 0 0 0 0.0059854 1 42645 42.843 32.471 1 0.71486 0.58567 0 2593000 1563100 1029900 704 1911 285 292 1095 1095 AEEVATFFAK 10 1 0 Unmodified _AEEVATFFAK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.7918 2 556.784764 1111.55498 81192.28 0.69032 0.00038436 -0.10239 -5.7009E-05 0.58793 0.00032735 556.784737837169 560.791660536819 79.073 1.3425 79.073 78.461 79.803 0 752 121 10 0 0 0 5.006E-06 2 46534 108.98 92.775 1 1.0728 1.2823 0 815780000 408610000 407180000 705 1470 286 293 1096;1097 1096 AEEVATFFAK 10 1 0 Unmodified _AEEVATFFAK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.7854 2 556.784764 1111.55498 80397.07 0.67884 0.00037797 -0.12931 -7.2E-05 0.54953 0.00030597 556.784791275318 560.791663787283 77.782 1.5621 77.782 77.284 78.846 0 724 132 10 0 0 0 4.0192E-08 3 46992 117.81 117.81 1 1.1205 1.3208 0 637770000 301920000 335840000 706 1470 286 293 1098;1099;1100 1099 AEEVATFFAK 10 1 0 Unmodified _AEEVATFFAK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.7949 2 556.784764 1111.55498 80198.52 0.39999 0.00022271 -0.082636 -4.601E-05 0.31736 0.0001767 556.784930322114 560.791752130187 89.903 1.9699 89.903 89.471 91.441 0 761 128 11 0 0 0 7.4352E-06 5 49704 107.15 98.209 1 1.499 1.3071 0 162110000 64298000 97810000 707 1470 286 293 1101;1102;1103;1104;1105 1103 AEEVATFFAK 10 1 0 Unmodified _AEEVATFFAK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.7922 2 556.784764 1111.55498 80193.41 0.40398 0.00022493 -0.1282 -7.1379E-05 0.27579 0.00015355 556.784871553169 560.791725160128 89.841 1.8292 89.841 89.399 91.229 0 720 114 11 0 0 0 0.00061895 4 49200 83.948 76.468 1 1.5104 1.2955 0 136490000 53038000 83457000 708 1470 286 293 1106;1107;1108;1109 1108 AEEYTEETEEREESTTGFDK 20 1 1 Unmodified _AEEYTEETEEREESTTGFDK_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.3448 3 794.003073 2378.98739 68748.73 0.6495 0.00051571 0.14955 0.00011874 0.79905 0.00063445 794.337638081419 800.01051402016 43.135 0.48237 43.135 42.912 43.394 0 235 37 8 0 0 0 8.8284E-18 2 22959 115.57 115.57 1 1.3704 1.6121 0 33757000 13797000 19960000 709 2128 287 294 1110;1111 1110 AEEYTEETEEREESTTGFDK 20 1 1 Unmodified _AEEYTEETEEREESTTGFDK_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.3464 3 794.003073 2378.98739 68446.72 0.90186 0.00071608 -0.19484 -0.00015471 0.70701 0.00056137 794.337050027998 800.010325249472 42.278 0.47368 42.278 42.049 42.523 -3.8147E-06 266 40 9 0 0 0 3.366E-09 3 22665 90.654 90.654 1 1.2143 1.4269 0 62630000 23476000 39154000 710 2128 287 294 1112;1113;1114 1112 AEEYTEETEEREESTTGFDK 20 1 1 Unmodified _AEEYTEETEEREESTTGFDK_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 800.011 3 794.003073 2378.98739 67654.64 0.32362 0.00025695 0.20552 0.00016319 0.52914 0.00042014 794.33744404561 800.010805332785 51.589 0.56564 51.589 51.329 51.894 0 269 43 9 0 0 0 0.00021758 2 25351 36.481 36.481 1 1.7306 1.4649 0 8252900 2978800 5274100 711 2128 287 294 1115;1116 1115 AEEYTEETEEREESTTGFDK 20 1 1 Unmodified _AEEYTEETEEREESTTGFDK_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 800.3443 3 794.003073 2378.98739 68956.25 0.43873 0.00034835 0.048469 3.8485E-05 0.48719 0.00038683 794.33729084543 800.010818264272 52.313 0.55753 52.313 52.106 52.664 -3.8147E-06 283 46 8 0 0 0 6.8371E-05 2 25251 40.952 40.952 1 1.6104 1.3504 0 6304100 2091300 4212800 712 2128 287 294 1117;1118 1118 AEFAAPSTDAPDK 13 1 0 Unmodified _AEFAAPSTDAPDK_ 0 0 0 Q96B26 Q96B26 Q96B26 EXOSC8 Exosome complex component RRP43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.3092 2 660.309332 1318.60411 73762.7 0.80516 0.00053166 1.0544 0.0006962 1.8595 0.0012279 660.30920208497 664.317258530345 42.99 0.77481 42.99 42.698 43.473 0 176 53 6 0 0 0 2.3956E-05 1 22975 98.898 98.898 1 1.4734 1.6124 0 51844000 12864000 38980000 713 1959 288 295 1119 1119 AEFAAPSTDAPDK 13 1 0 Unmodified _AEFAAPSTDAPDK_ 0 0 0 Q96B26 Q96B26 Q96B26 EXOSC8 Exosome complex component RRP43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3091 2 660.309332 1318.60411 73618.34 0.80194 0.00052953 0.90186 0.00059551 1.7038 0.001125 660.30928272637 664.317359700274 42.333 0.7393 42.333 42.09 42.83 3.8147E-06 188 56 6 0 0 0 3.2884E-05 1 22759 98.156 98.156 1 1.2732 1.4294 0 75765000 27878000 47887000 714 1959 288 295 1120 1120 AEFEDQDDEAR 11 0 1 Unmodified _AEFEDQDDEAR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.7722 2 662.768028 1323.5215 74735.33 0.73657 0.00048818 -0.013691 -9.0738E-06 0.72288 0.0004791 662.767969922085 667.772108328674 23.879 0.47675 23.879 23.666 24.143 1.9073E-06 148 23 9 0 0 0 2.3743E-10 2 9631 134.25 127.66 1 0.93464 1.0375 0 69604000 37117000 32487000 715 1742 289 296 1121;1122 1121 AEFEDQDDEAR 11 0 1 Unmodified _AEFEDQDDEAR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.772 2 662.768028 1323.5215 75137.19 0.51225 0.0003395 0.12529 8.3036E-05 0.63753 0.00042254 662.768017227038 667.772158405883 23.646 0.35087 23.646 23.467 23.818 0 71 13 8 0 0 0 1.7174E-12 2 9447 143.03 137.83 1 0.91936 1.0042 0 38061000 20377000 17684000 716 1742 289 296 1123;1124 1124 AEFEDQDDEAR 11 0 1 Unmodified _AEFEDQDDEAR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.7726 2 662.768028 1323.5215 73265.87 0.48867 0.00032388 0.42271 0.00028016 0.91138 0.00060403 662.76825655003 667.772407986485 26.667 0.76397 26.667 26.357 27.121 0 170 36 8 0 0 0 1.4137E-05 2 10107 107.21 105 1 1.2617 1.056 0 24628000 10590000 14038000 717 1742 289 296 1125;1126 1126 AEFGDFDIK 9 1 0 Unmodified _AEFGDFDIK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6;B4E138 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.2546 2 521.248015 1040.48148 84037.38 0.90441 0.00047142 -0.15164 -7.9043E-05 0.75276 0.00039238 521.2479177506 525.2548806479 84.17 0.76766 84.17 83.741 84.508 0 298 61 7 0 0 0 0.023107 2 50217 48.794 44.221 1 0.68233 0.77039 0 80418000 49410000 31008000 718 528 290 297 1127;1128 1127 AEFGDFDIK 9 1 0 Unmodified _AEFGDFDIK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6;B4E138 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.2484 2 521.248015 1040.48148 85068.77 0.38793 0.00020221 0.42331 0.00022065 0.81124 0.00042286 521.248188457224 525.255173059088 83.201 0.75778 83.201 82.736 83.494 0 262 57 6 0 0 0 0.013598 2 50813 56.432 56.258 1 0.73113 0.81749 0 86641000 51192000 35449000 719 528 290 297 1129;1130 1130 AEFGDFDIK 9 1 0 Unmodified _AEFGDFDIK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6;B4E138 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.2553 2 521.248015 1040.48148 84325.32 0.51269 0.00026724 0.14358 7.4842E-05 0.65627 0.00034208 521.248007405815 525.25513954484 96.072 0.76601 96.072 95.688 96.454 -7.6294E-06 266 49 7 0 0 0 0.014576 2 53858 55.549 55.549 1 1.017 0.78845 0 13710000 6911500 6798600 720 528 290 297 1131;1132 1132 AEFGDFDIK 9 1 0 Unmodified _AEFGDFDIK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6;B4E138 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.2478 2 521.248015 1040.48148 84923.31 0.18076 9.4222E-05 0.30393 0.00015842 0.48469 0.00025264 521.248114477562 525.255168010505 95.975 0.8555 95.975 95.647 96.503 7.6294E-06 286 54 8 0 0 0 0.046824 2 52877 39.305 39.305 1 1.0143 0.83171 0 12434000 6202200 6231400 721 528 290 297 1133;1134 1134 AEFVEVTK 8 1 0 Unmodified _AEFVEVTK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.7477 2 461.74765 921.480748 NaN NaN NaN -0.56116 -0.00025912 NaN NaN NaN NaN 50.408 0.68317 50.408 50.045 50.728 0 0 0 0 0.028086 1 24681 60.436 39.136 1 NaN NaN 0 2164800 2164800 0 + 722 1153 291 298 1135 1135 AEGDSAGTAGTPGGTPAGDK 20 1 0 Unmodified _AEGDSAGTAGTPGGTPAGDK_ 0 0 0 J3KMX2;B9EGA3;Q92925 J3KMX2 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.8878 2 858.887194 1715.75984 68428.55 0.55738 0.00047872 -0.31237 -0.00026829 0.24501 0.00021043 858.887080961337 862.893591496483 19.969 0.18504 19.969 19.888 20.073 0 35 7 6 0 0 0 1.0043E-12 2 6300 103.11 103.11 1 0.81211 0.80624 0 6088900 3143800 2945100 723 1120 292 299 1136;1137 1136 AEGDVAALNR 10 0 1 Unmodified _AEGDVAALNR_ 0 0 0 B4DVY2;V9HW56;P67936;B4DTB1 B4DVY2 B4DVY2 HEL-S-108;TPM4 Tropomyosin alpha-4 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.2667 2 508.261988 1014.50942 88695.54 0.38248 0.0001944 1.3015 0.00066152 1.684 0.00085592 508.261974461764 513.267084546563 29.635 0.12954 29.635 29.562 29.692 0 27 9 4 0 0 0 4.8926E-08 1 14392 116.05 75.022 1 2.3954 2.4694 0 19856000 6394900 13461000 + 724 1043 293 300 1138 1138 AEGDVAALNR 10 0 1 Unmodified _AEGDVAALNR_ 0 0 0 B4DVY2;V9HW56;P67936;B4DTB1 B4DVY2 B4DVY2 HEL-S-108;TPM4 Tropomyosin alpha-4 chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.2675 2 508.261988 1014.50942 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.243 1 29.243 28.743 29.743 1.9073E-06 0 0 0 0.024872 1 14089 52.255 28.033 1 + 725 1043 293 300 1139 1139 AEGGGATTSTQVMVIK 16 1 0 Oxidation (M) _AEGGGATTSTQVM(ox)VIK_ AEGGGATTSTQVM(1)VIK AEGGGATTSTQVM(61.24)VIK 0 1 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A075BPP5 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.4036 2 783.395612 1564.77667 69320.85 1.1519 0.00090239 -0.57782 -0.00045266 0.57408 0.00044973 783.395168987285 787.402616958178 43.694 0.41061 43.694 43.553 43.964 0 77 31 5 0 0 0 8.2832E-05 1 23837 61.235 52.336 1 0.77112 0.78889 0 11905000 6572700 5332200 726 623 294 301 1140 1140 480 AEGLLQGK 8 1 0 Unmodified _AEGLLQGK_ 0 0 0 G3V167;A8K214;Q9UGN5 G3V167 G3V167 PARP2 Poly [ADP-ribose] polymerase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 412.2418 2 408.23471 814.454868 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.359 1 29.359 28.859 29.859 0 0 0 0 0.0093828 1 14162 77.741 28.98 1 727 706 295 302 1141 1141 AEGSEAAELAEIYAK 15 1 0 Unmodified _AEGSEAAELAEIYAK_ 0 0 0 B4DRU9;A0A0S2Z5L1;Q9NUQ8 B4DRU9 B4DRU9 ABCF3 ATP-binding cassette sub-family F member 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.3815 2 776.380485 1550.74642 NaN NaN NaN 0.79177 0.00061472 NaN NaN NaN NaN 88.143 0.25539 88.143 88.01 88.265 0 0 0 0 0.053042 1 53081 36.236 15.625 1 NaN NaN 0 7371800 7371800 0 728 583 296 303 1142 1142 AEGSEAAELAEIYAK 15 1 0 Unmodified _AEGSEAAELAEIYAK_ 0 0 0 B4DRU9;A0A0S2Z5L1;Q9NUQ8 B4DRU9 B4DRU9 ABCF3 ATP-binding cassette sub-family F member 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.8883 2 776.380485 1550.74642 NaN NaN NaN -0.60197 -0.00046736 NaN NaN NaN NaN 87.249 0.4622 87.249 87.116 87.578 0 0 0 0 1.3007E-16 1 53739 129.84 103.8 1 NaN NaN 0 10154000 0 10154000 729 583 296 303 1143 1143 AEGTVFTEEDFQK 13 1 0 Unmodified _AEGTVFTEEDFQK_ 0 0 0 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.8535 2 750.846278 1499.678 70404.55 0.30743 0.00023083 0.98325 0.00073827 1.2907 0.0009691 750.846288315908 754.853659496281 69.723 0.68832 69.723 69.547 70.235 0 222 62 7 0 0 0 0.00016029 1 40728 87.568 51.043 1 1.1615 1.2606 0 45844000 21001000 24843000 730 87 297 304 1144 1144 AEGTVFTEEDFQK 13 1 0 Unmodified _AEGTVFTEEDFQK_ 0 0 0 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.8532 2 750.846278 1499.678 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.923 1 68.923 68.423 69.423 0 0 0 0 4.4899E-05 1 40982 94.363 57.938 1 731 87 297 304 1145 1145 AEGTVFTEEDFQK 13 1 0 Unmodified _AEGTVFTEEDFQK_ 0 0 0 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.3582 2 750.846278 1499.678 70580.44 0.40391 0.00030328 0.59895 0.00044972 1.0029 0.00075299 751.34732914058 754.854032290003 68.655 0.76938 68.655 68.392 69.162 0 183 66 6 0 0 0 0.002399 1 40959 69.346 48.347 1 0.95065 0.98248 0 24970000 9324800 15645000 732 87 297 304 1146 1146 AEGTVFTEEDFQK 13 1 0 Unmodified _AEGTVFTEEDFQK_ 0 0 0 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.846 2 750.846278 1499.678 68326.45 0.53478 0.00040154 1.0014 0.00075187 1.5361 0.0011534 750.846058208096 754.853601098113 80.07 0.89803 80.07 79.507 80.405 7.6294E-06 189 57 7 0 0 0 9.1829E-05 1 43241 93.258 56.924 1 1.392 1.1137 0 8750100 3676500 5073600 733 87 297 304 1147 1147 AEGTVFTEEDFQK 13 1 0 Unmodified _AEGTVFTEEDFQK_ 0 0 0 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.8542 2 750.846278 1499.678 69390.15 0.46679 0.00035049 0.62868 0.00047205 1.0955 0.00082253 750.846158246497 754.853615578926 80.385 0.68752 80.385 80.016 80.704 0 186 43 9 0 0 0 0.00012278 2 42543 90.685 54.351 1 1.3193 1.083 0 9187700 4066900 5120800 734 87 297 304 1148;1149 1148 AEGTVNEGRPESDAADHTGPK 21 1 1 Unmodified _AEGTVNEGRPESDAADHTGPK_ 0 0 1 Q96EH3 Q96EH3 Q96EH3 MALSU1 Mitochondrial assembly of ribosomal large subunit protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.6641 3 713.329677 2136.9672 71305.14 0.39817 0.00028403 -1.1441 -0.00081614 -0.74596 -0.00053212 713.663262415052 719.334990009462 17.325 0.48831 17.325 17.167 17.656 0 40 16 5 0 0 0 2.4387E-05 1 4255 43.534 43.534 1 1.0987 1.2061 0 5214300 2276700 2937600 735 1962 298 305 1150 1150 AEGYAEGDLTLYHR 14 0 1 Unmodified _AEGYAEGDLTLYHR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.5897 3 532.254722 1593.74234 83014.99 0.53583 0.0002852 0.04984 2.6528E-05 0.58567 0.00031172 532.254547726742 535.590835895725 60.649 1.0321 60.649 60.162 61.194 -3.8147E-06 382 84 6 0 0 0 4.7891E-05 2 34531 68.044 68.044 1 0.8232 0.88425 0 46937000 25063000 21875000 736 1898 299 306 1151;1152 1152 AEGYAEGDLTLYHR 14 0 1 Unmodified _AEGYAEGDLTLYHR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.8801 2 797.878444 1593.74234 68431.72 0.90379 0.00072112 0.18201 0.00014522 1.0858 0.00086634 797.878559398363 802.882812284947 60.634 0.67159 60.634 60.33 61.001 0 132 57 4 0 0 0 1.4705E-06 1 34596 108.35 101.82 1 1.2145 1.2574 0 20399000 9338200 11060000 737 1898 299 306 1153 1153 AEGYAEGDLTLYHR 14 0 1 Unmodified _AEGYAEGDLTLYHR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.8855 2 797.878444 1593.74234 67355.23 0.76308 0.00060885 0.42731 0.00034094 1.1904 0.00094979 797.878508999897 802.883181972322 59.228 0.57299 59.228 59.027 59.6 0 187 51 5 0 0 0 7.1521E-05 2 34409 89.805 89.805 1 1.0033 1.0328 0 21338000 10971000 10367000 738 1898 299 306 1154;1155 1154 AEGYAEGDLTLYHR 14 0 1 Unmodified _AEGYAEGDLTLYHR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.5891 3 532.254722 1593.74234 82587.28 0.51562 0.00027444 0.012328 6.5614E-06 0.52795 0.000281 532.254638286121 535.590826751234 59.299 0.87003 59.299 58.971 59.841 0 375 78 7 0 0 0 9.8173E-10 2 34477 107.99 105.36 1 0.91843 1.0636 0 57383000 30498000 26885000 739 1898 299 306 1156;1157 1157 AEGYAEGDLTLYHR 14 0 1 Unmodified _AEGYAEGDLTLYHR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.3845 2 797.878444 1593.74234 68175.19 0.34214 0.00027299 0.31612 0.00025223 0.65826 0.00052522 797.878512810812 802.882798542479 70.319 0.54602 70.319 70.047 70.593 7.6294E-06 196 38 8 0 0 0 0.0019336 1 36771 50.149 40.196 1 1.2092 0.99381 0 11943000 5667400 6275900 740 1898 299 306 1158 1158 AEGYAEGDLTLYHR 14 0 1 Unmodified _AEGYAEGDLTLYHR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.5911 3 532.254722 1593.74234 82404.05 0.18465 9.828E-05 0.21652 0.00011524 0.40117 0.00021352 532.254758354276 535.590953484362 70.304 0.66379 70.304 70.025 70.689 0 272 47 9 0 0 0 0.00026391 2 36888 64.104 61.469 1 1.2015 0.99507 0 20022000 8813800 11209000 741 1898 299 306 1159;1160 1160 AEGYAEGDLTLYHR 14 0 1 Unmodified _AEGYAEGDLTLYHR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 797.8781 2 797.878444 1593.74234 68642.81 0.21835 0.00017422 0.49712 0.00039664 0.71547 0.00057086 797.878518713108 802.882962749954 70.79 0.56548 70.79 70.515 71.08 0 247 46 8 0 0 0 0.039711 1 36327 28.384 26.443 1 1.2228 0.99224 0 12058000 5584300 6474000 742 1898 299 306 1161 1161 AEGYAEGDLTLYHR 14 0 1 Unmodified _AEGYAEGDLTLYHR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.5911 3 532.254722 1593.74234 83298.51 0.11162 5.941E-05 0.45056 0.00023981 0.56218 0.00029922 532.254868540159 535.591024859787 70.787 0.66428 70.787 70.515 71.179 0 316 52 8 0 0 0 4.8116E-05 1 36371 73.156 70.522 1 1.225 1.0542 0 21951000 9742700 12209000 743 1898 299 306 1162 1162 AEHDQLLLNYAK 12 1 0 Unmodified _AEHDQLLLNYAK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.2487 3 472.249019 1413.72523 NaN NaN NaN 0.35092 0.00016572 NaN NaN NaN NaN 59.928 0.77211 59.928 59.6 60.372 0 0 0 0 0.028545 1 35014 27.33 18.733 1 NaN NaN 0 7346500 7346500 0 744 1502 300 307 1163 1163 AEHDSILAEK 10 1 0 Unmodified _AEHDSILAEK_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;D6RBR8;D6RCA5;D6R9F8;D6RDJ6 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.7827 2 556.782753 1111.55095 82406.8 0.40252 0.00022412 -0.10873 -6.0539E-05 0.29379 0.00016358 556.782475778918 560.789906531238 24.395 0.37681 24.395 24.156 24.533 0 64 16 7 0 0 0 8.2021E-12 2 10175 140.83 88.119 1 1.8402 1.9813 0 37803000 13201000 24602000 745 892 301 308 1164;1165 1165 AEHDSILAEK 10 1 0 Unmodified _AEHDSILAEK_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;D6RBR8;D6RCA5;D6R9F8;D6RDJ6 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.7901 2 556.782753 1111.55095 81642.87 0.42868 0.00023868 -0.10873 -6.0536E-05 0.31996 0.00017815 556.782531536317 560.789327920717 27.099 0.34866 27.099 26.944 27.292 0 61 17 6 0 0 0 0.026779 1 10445 44.097 21.568 1 1.14 0.95228 0 1675100 741500 933650 746 892 301 308 1166 1166 AEHDSILAEK 10 1 0 Unmodified _AEHDSILAEK_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;D6RBR8;D6RCA5;D6R9F8;D6RDJ6 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.7822 2 556.782753 1111.55095 80963.36 0.29598 0.0001648 -0.2549 -0.00014192 0.041079 2.2872E-05 556.782641042562 560.789287065247 27.017 0.40478 27.017 26.844 27.249 0 63 17 6 0 0 0 0.03614 1 9850 40.331 27.354 1 1.0776 0.90425 0 1503600 704910 798650 747 892 301 308 1167 1167 AEIIDQDLYER 11 0 1 Unmodified _AEIIDQDLYER_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.8438 2 682.838256 1363.66196 NaN NaN NaN 0.17211 0.00011753 NaN NaN NaN NaN 74.411 0.55667 74.411 74.073 74.629 0 0 0 0 1.1356E-05 1 43610 104.22 85.782 1 NaN NaN 0 9707400 0 9707400 748 397;1622 302 309 1168 1168 AEIIDQDLYER 11 0 1 Unmodified _AEIIDQDLYER_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.8418 2 682.838256 1363.66196 77225.02 0.53175 0.0003631 -0.32588 -0.00022252 0.20587 0.00014058 682.838488286623 687.842198651818 84.809 0.48443 84.809 84.558 85.042 0 140 35 7 0 0 0 0.0016997 2 46231 65.5 65.5 1 2.4895 2.1458 0 2656500 641050 2015500 749 397;1622 302 309 1169;1170 1169 AEIIDQDLYER 11 0 1 Unmodified _AEIIDQDLYER_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.8432 2 682.838256 1363.66196 75547.9 0.66515 0.00045419 -0.35481 -0.00024228 0.31034 0.00021191 683.339544408671 687.842274154042 84.973 0.51358 84.973 84.761 85.275 0 93 35 4 0 0 0 0.016417 2 45570 45.829 45.829 1 2.7994 2.4852 0 1927500 635420 1292100 750 397;1622 302 309 1171;1172 1172 AEINILLCGDPGTSK 15 1 0 Unmodified _AEINILLCGDPGTSK_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RG31 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.4084 2 794.40598 1586.79741 NaN NaN NaN 2.3585 0.0018736 NaN NaN NaN NaN 95.265 0.37685 95.265 94.942 95.319 -7.6294E-06 0 0 0 0.012739 1 59331 48.659 18.916 1 NaN NaN 0 3937100 3937100 0 751 235 303 310 1173 1173 AEIPCEDEQEQEHNGPLDNK 20 1 0 Unmodified _AEIPCEDEQEQEHNGPLDNK_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9;H0Y932 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.6801 3 784.673004 2350.99718 68230.42 0.79626 0.0006248 -0.39983 -0.00031374 0.39643 0.00031107 785.006801934745 787.678600704312 41.062 0.43543 41.062 40.846 41.281 0 200 34 9 0 0 0 3.0507E-05 2 21460 43.955 43.866 1 1.6688 1.7526 0 30427000 12011000 18416000 752 1988 304 311 1174;1175 1175 AEIPCEDEQEQEHNGPLDNK 20 1 0 Unmodified _AEIPCEDEQEQEHNGPLDNK_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9;H0Y932 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.3447 3 784.673004 2350.99718 69611.3 0.80592 0.00063238 -0.4068 -0.0003192 0.39912 0.00031318 785.006766025264 787.678478943847 40.131 0.43936 40.131 39.925 40.364 0 209 37 9 0 0 0 8.4325E-07 1 21299 64.83 64.83 1 1.7406 1.868 0 37326000 10628000 26698000 753 1988 304 311 1176 1176 AEISFEDRK 9 1 1 Unmodified _AEISFEDRK_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5C6;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.7781 2 547.77747 1093.54039 84473.18 0.56281 0.00030829 -0.35468 -0.00019429 0.20812 0.00011401 547.777497641978 556.788504260072 28.494 0.25177 28.494 28.36 28.612 0 60 16 5 0 0 0 0.0091302 1 13471 66.692 54.923 1 1.1894 1.2889 0 15209000 7686800 7522600 754 1504 305 312 1177 1177 AEISFEDRK 9 1 1 Unmodified _AEISFEDRK_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5C6;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.7888 2 547.77747 1093.54039 NaN NaN NaN -0.22531 -0.00012342 NaN NaN NaN NaN 27.727 0.3513 27.727 27.628 27.98 1.9073E-06 0 0 0 0.0078935 1 13015 69.598 28.569 1 NaN NaN 0 12336000 0 12336000 755 1504 305 312 1178 1178 AEIYEAFENIYPILK 15 1 0 Unmodified _AEIYEAFENIYPILK_ 0 0 0 H0Y6D8;Q32MN6;B4DPC1;Q5U0C8;Q32MN7;P20226 H0Y6D8 H0Y6D8 TBP TATA-box-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 911.4854 2 906.974553 1811.93455 63446.86 0.89458 0.00081136 0.7524 0.00068241 1.647 0.0014938 906.974645439394 910.982519629125 127.7 0.4417 127.7 127.53 127.97 -7.6294E-06 146 26 7 0 0 0 5.1571E-06 3 85289 96.64 96.64 1 0.60079 0.60606 0 16251000 10063000 6188000 756 1020 306 313 1179;1180;1181 1180 AELAELPLR 9 0 1 Unmodified _AELAELPLR_ 0 0 0 Q96QK1;Q5HYM2;Q53FR4 Q96QK1 Q96QK1 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2954 2 506.295299 1010.57605 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.704 1 83.704 83.204 84.204 0 0 0 0 0.011752 1 50118 61.962 27.155 1 757 1985 307 314 1182 1182 AELDDTPMR 9 0 1 Oxidation (M) _AELDDTPM(ox)R_ AELDDTPM(1)R AELDDTPM(50.04)R 0 1 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.2436 2 532.239864 1062.46517 84401.2 0.45583 0.00024261 0.41251 0.00021956 0.86834 0.00046217 532.240714206856 537.24400445518 22.958 0.45128 22.958 22.733 23.184 -1.9073E-06 79 23 4 0 0 0 0.01002 2 8939 50.04 34.378 1 2.3348 2.4493 0 11054000 2550700 8503000 758 1510 308 315 1183;1184 1184 1279 AELEIQK 7 1 0 Unmodified _AELEIQK_ 0 0 0 H3BQB1;P07741;H3BQZ9 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.734 2 415.734543 829.454533 91482.78 -0.01361 -5.6582E-06 0.0080661 3.3534E-06 -0.005544 -2.3048E-06 415.734431998908 419.741898897455 30.434 0.37881 30.434 30.187 30.565 0 122 30 7 0 0 0 0.026682 2 14928 76.035 18.932 1 3.1439 3.5449 0 67283000 13959000 53323000 759 1302 309 316 1185;1186 1186 AELFQQEQQSADK 13 1 0 Unmodified _AELFQQEQQSADK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.3622 2 761.362627 1520.7107 73627.72 0.95973 0.0007307 0.3961 0.00030158 1.3558 0.0010323 761.36303018923 765.369958884463 39.737 0.28886 39.737 39.658 39.947 0 81 24 4 0 0 0 1.6314E-23 2 21104 154.15 139.21 1 0.75015 0.76343 0 16913000 8695300 8217300 760 2002 310 317 1187;1188 1187 AELFQQEQQSADK 13 1 0 Unmodified _AELFQQEQQSADK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.3701 2 761.362627 1520.7107 71396.41 0.38408 0.00029243 0.44809 0.00034116 0.83217 0.00063359 761.864303904646 765.370103540061 46.748 0.6482 46.748 46.546 47.194 0 145 45 6 0 0 0 0.00024415 2 22534 68.355 56.642 1 2.1278 1.6821 0 4140600 1362000 2778600 761 2002 310 317 1189;1190 1189 AELFQQEQQSADK 13 1 0 Unmodified _AELFQQEQQSADK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.3713 2 761.362627 1520.7107 71074.53 0.34387 0.00026181 0.35422 0.00026969 0.69809 0.0005315 761.362831943956 765.370126548105 47.002 0.64534 47.002 46.649 47.294 3.8147E-06 207 49 6 0 0 0 0.013486 1 22065 38.238 30.312 1 3.0656 2.4857 0 2786100 855860 1930200 762 2002 310 317 1191 1191 AELGEYIR 8 0 1 Unmodified _AELGEYIR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.755 2 475.750724 949.486896 NaN NaN NaN 0.85985 0.00040907 NaN NaN NaN NaN 57.005 0.48485 57.005 56.758 57.243 0 0 0 0 0.030732 1 32162 58.815 28.203 1 NaN NaN 0 4541400 0 4541400 763 1729 311 318 1192 1192 AELGEYIR 8 0 1 Unmodified _AELGEYIR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.7533 2 475.750724 949.486896 NaN NaN NaN -0.74452 -0.00035421 NaN NaN NaN NaN 56.041 0.41932 56.041 55.854 56.273 0 0 0 0 0.034435 1 32144 56.547 29.41 1 NaN NaN 0 6571900 0 6571900 764 1729 311 318 1193 1193 AELGTDLLSQLSLEDQK 17 1 0 Unmodified _AELGTDLLSQLSLEDQK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 930.986 2 930.48347 1858.95239 63041.95 0.66139 0.00061541 -1.3676 -0.0012725 -0.70619 -0.0006571 930.483738173534 934.489131928726 130.88 0.80942 130.88 130.49 131.3 0 200 37 9 0 0 0 4.0494E-05 1 79338 79.614 79.614 1 2.2694 1.8277 0 22113000 8061200 14051000 765 803 312 319 1194 1194 AELGTDLLSQLSLEDQK 17 1 0 Unmodified _AELGTDLLSQLSLEDQK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 933.9641 2 930.48347 1858.95239 62769.99 0.864 0.00080394 -1.2959 -0.0012058 -0.43189 -0.00040187 930.483732292395 934.489160896264 130.76 0.84595 130.76 130.31 131.16 0 192 36 10 0 0 0 0.00022409 1 78290 60.345 44.252 1 1.8526 1.5398 0 37785000 13252000 24533000 766 803 312 319 1195 1195 AELIVQPELK 10 1 0 Unmodified _AELIVQPELK_ 0 0 0 P15924;Q4LE79;B4E2A0;Q6ZP16;G1UI31 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.3436 2 570.337164 1138.65977 81266.93 0.32306 0.00018425 -0.35509 -0.00020252 -0.032036 -1.8271E-05 570.336881883538 574.34405683176 81.514 0.59418 81.514 81.204 81.799 0 219 52 6 0 0 0 0.00041053 2 48511 87.308 70.834 1 0.51511 0.51937 0 27258000 16769000 10489000 767 1486 313 320 1196;1197 1196 AELIVQPELK 10 1 0 Unmodified _AELIVQPELK_ 0 0 0 P15924;Q4LE79;B4E2A0;Q6ZP16;G1UI31 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.3436 2 570.337164 1138.65977 80161.86 0.63814 0.00036396 -0.85152 -0.00048565 -0.21338 -0.0001217 570.336533802581 574.343780607887 80.34 0.65577 80.34 80.102 80.757 0 192 52 5 0 0 0 9.7206E-05 1 48898 97.431 78.336 1 0.52361 0.56059 0 23000000 13979000 9020800 768 1486 313 320 1198 1198 AELIVQPELK 10 1 0 Unmodified _AELIVQPELK_ 0 0 0 P15924;Q4LE79;B4E2A0;Q6ZP16;G1UI31 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.3368 2 570.337164 1138.65977 82415.09 0.54087 0.00030848 -0.38391 -0.00021896 0.15696 8.9521E-05 570.336844096936 574.344062221632 93.037 0.59927 93.037 92.782 93.381 0 110 34 5 0 0 0 0.010142 1 51829 53.756 46.111 1 0.48492 0.3963 0 2625200 1954200 670940 769 1486 313 320 1199 1199 AELIVQPELK 10 1 0 Unmodified _AELIVQPELK_ 0 0 0 P15924;Q4LE79;B4E2A0;Q6ZP16;G1UI31 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.3374 2 570.337164 1138.65977 81493.77 0.24049 0.00013716 -0.13568 -7.7386E-05 0.10481 5.9775E-05 570.336901447738 574.3443014014 92.827 0.63654 92.827 92.567 93.203 0 118 39 4 0 0 0 0.043945 1 50844 37.191 28.971 1 0.49547 0.38534 0 2142000 1475400 666560 770 1486 313 320 1200 1200 AELLLLK 7 1 0 Unmodified _AELLLLK_ 0 0 0 Q8WUA4;Q53QN0;A0A087WZD8 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2676 2 400.268022 798.521491 97241.12 0.42887 0.00017166 -0.17516 -7.0113E-05 0.2537 0.00010155 400.267867875479 404.274905272009 85.715 0.53867 85.715 85.435 85.973 0 131 39 4 0 0 0 0.027742 1 52644 73.039 0 1 0.86024 0.88871 0 24994000 12273000 12721000 771 1938 314 321 1201 1201 AELNEFLTR 9 0 1 Unmodified _AELNEFLTR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82;E9PQX2;H0YES8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.788 2 546.787838 1091.56112 81776.2 0.54265 0.00029671 -0.012038 -6.582E-06 0.53061 0.00029013 546.787746082218 551.791939816787 78.014 1.2612 78.014 77.436 78.697 0 586 103 10 0 0 0 1.7956E-12 2 45875 161.79 113.03 1 1.0989 1.3004 0 336890000 163810000 173080000 772 1511 315 322 1202;1203 1203 AELNEFLTR 9 0 1 Unmodified _AELNEFLTR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82;E9PQX2;H0YES8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.7881 2 546.787838 1091.56112 81522.51 0.32787 0.00017927 0.15344 8.3902E-05 0.48131 0.00026318 546.787865101997 551.792011454001 76.888 1.2865 76.888 76.307 77.593 0 556 101 9 0 0 0 0.00023093 2 46207 105.4 65.298 1 1.0549 1.2278 0 418430000 202070000 216370000 773 1511 315 322 1204;1205 1205 AELNEFLTR 9 0 1 Unmodified _AELNEFLTR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82;E9PQX2;H0YES8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.7925 2 546.787838 1091.56112 81581.95 0.77557 0.00042407 -0.18431 -0.00010078 0.59126 0.00032329 546.787641826756 551.791912044101 88.805 1.0887 88.805 88.337 89.426 7.6294E-06 406 69 9 0 0 0 0.0020277 2 48814 77.732 57.946 1 1.024 0.86851 0 32592000 16297000 16295000 774 1511 315 322 1206;1207 1207 AELNEFLTR 9 0 1 Unmodified _AELNEFLTR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82;E9PQX2;H0YES8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.7921 2 546.787838 1091.56112 81332 0.34693 0.0001897 0.11454 6.2629E-05 0.46147 0.00025233 546.787845961693 551.792030027729 88.79 1.0391 88.79 88.376 89.415 0 376 65 9 0 0 0 0.007781 2 48012 61.679 47.01 1 1.0453 0.91185 0 26801000 13468000 13332000 775 1511 315 322 1208;1209 1209 AELNSTTEELHK 12 1 0 Unmodified _AELNSTTEELHK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.3425 2 686.341163 1370.66777 74573.16 0.4348 0.00029842 0.40318 0.00027672 0.83797 0.00057514 686.341507629591 690.34833866095 26.589 0.31984 26.589 26.403 26.723 0 86 17 7 0 0 0 4.1983E-18 3 11905 146.11 119.59 1 0.7511 0.82253 0 52221000 30800000 21421000 776 1421 316 323 1210;1211;1212 1210 AELNSTTEELHK 12 1 0 Unmodified _AELNSTTEELHK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.8967 3 457.896534 1370.66777 90126.59 0.078204 3.5809E-05 0.10718 4.9078E-05 0.18539 8.4888E-05 457.896617861071 460.567823767967 26.587 0.35315 26.587 26.37 26.723 0 111 19 8 0 0 0 0.020779 1 11933 21.775 15.499 1 0.73845 0.82801 0 65548000 39484000 26063000 777 1421 316 323 1213 1213 AELNSTTEELHK 12 1 0 Unmodified _AELNSTTEELHK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.348 2 686.341163 1370.66777 73309.73 0.74729 0.0005129 0.51774 0.00035535 1.265 0.00086824 686.341449611829 690.348688330894 26.08 0.37394 26.08 25.893 26.267 0 82 18 8 0 0 0 4.1983E-18 2 11557 146.11 115.39 1 0.66771 0.74202 0 50379000 28164000 22215000 778 1421 316 323 1214;1215 1215 AELNSTTEELHK 12 1 0 Unmodified _AELNSTTEELHK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 690.3484 2 686.341163 1370.66777 73529.39 0.39682 0.00027235 0.34699 0.00023815 0.74381 0.0005105 686.341365958219 690.348401474852 30.297 0.51136 30.297 30.096 30.607 1.9073E-06 160 32 8 0 0 0 9.4492E-05 2 12476 96.113 67.387 1 1.2595 0.97652 0 13775000 5595100 8179700 779 1421 316 323 1216;1217 1217 AELNSTTEELHK 12 1 0 Unmodified _AELNSTTEELHK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.5677 3 457.896534 1370.66777 87470.95 0.11411 5.2252E-05 0.41666 0.00019079 0.53077 0.00024304 458.231290992331 460.567980462687 30.3 0.55457 30.3 30.068 30.623 0 211 35 9 0 0 0 0.035417 2 12499 16.662 13.344 1 0.9691 0.77187 0 19670000 10097000 9573100 780 1421 316 323 1218;1219 1219 AELNSTTEELHK 12 1 0 Unmodified _AELNSTTEELHK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.3485 2 686.341163 1370.66777 73503.41 0.26483 0.00018177 0.42063 0.0002887 0.68547 0.00047046 686.341392216983 690.348483912002 30.423 0.62747 30.423 30.203 30.831 0 192 37 9 0 0 0 0.0071291 1 12043 48.741 31.305 1 1.2688 1.0186 0 14146000 6416900 7728600 781 1421 316 323 1220 1220 AELNSTTEELHK 12 1 0 Unmodified _AELNSTTEELHK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 460.5681 3 457.896534 1370.66777 88429.91 -0.23881 -0.00010935 0.52769 0.00024163 0.28889 0.00013228 458.231350512916 460.567997199215 30.432 0.56911 30.432 30.221 30.79 0 207 34 9 0 0 0 0.055076 1 12087 14.353 9.5041 1 0.81728 0.65674 0 17088000 8914500 8173800 782 1421 316 323 1221 1221 AELNTHVNVK 10 1 0 Acetyl (Protein N-term) _(ac)AELNTHVNVK_ 1 0 0 A0A024R3V0;Q9NUQ6;C9JKE4;F8VZ02;F8VT91;C9JGM8;F8W6C2;C9IZC3;C9J8M7;F2Z2S1;Q4ZFW0;F8WAV0 A0A024R3V0 A0A024R3V0 DNAPTP6;SPATS2L;DKFZP564A2416 SPATS2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.812 2 583.811845 1165.60914 80684.86 0.70562 0.00041195 -0.23389 -0.00013655 0.47173 0.0002754 583.811281782547 587.818677608968 51.288 0.41258 51.288 51.089 51.502 0 122 30 5 0 0 0 2.4648E-06 1 29102 113.93 97.386 1 0.78745 0.8122 0 18263000 9734600 8528900 783 141 317 324 1222 1222 AELVQLVSPFLGK 13 1 0 Unmodified _AELVQLVSPFLGK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.9126 2 700.911027 1399.8075 76185.43 0.63801 0.00044719 0.59547 0.00041737 1.2335 0.00086456 700.911326263561 705.419785518768 124.28 0.53249 124.28 123.92 124.46 0 124 36 6 0 0 0 0.0010174 3 80608 59.542 59.542 1 0.97199 0.97906 0 4911600 2182400 2729100 784 1990 318 325 1223;1224;1225 1224 AELVQLVSPFLGK 13 1 0 Unmodified _AELVQLVSPFLGK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.9192 2 700.911027 1399.8075 78394.42 0.92277 0.00064678 0.32529 0.000228 1.2481 0.00087478 700.911021017319 705.419663332815 123.79 0.69382 123.79 123.34 124.03 0 129 49 6 0 0 0 0.00014426 1 82333 83 83 1 0.74628 0.74738 0 5582000 3070600 2511300 785 1990 318 325 1226 1226 AENAGLSSTAGLLR 14 0 1 Unmodified _AENAGLSSTAGLLR_ 0 0 0 Q5U079;Q53HP8;P17275 Q5U079 Q5U079 JUNB Transcription factor jun-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.3684 2 680.364973 1358.71539 74726.67 0.79298 0.00053951 -0.046068 -3.1343E-05 0.74691 0.00050817 680.364945488472 685.368915862671 75.301 0.43561 75.301 75.012 75.448 0 125 35 6 0 0 0 0.0051232 2 44159 44.299 44.299 1 0.93935 0.9867 0 11716000 6824700 4891500 786 1491 319 326 1227;1228 1227 AENAGLSSTAGLLR 14 0 1 Unmodified _AENAGLSSTAGLLR_ 0 0 0 Q5U079;Q53HP8;P17275 Q5U079 Q5U079 JUNB Transcription factor jun-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.3703 2 680.364973 1358.71539 74329.02 0.57538 0.00039147 0.26498 0.00018028 0.84036 0.00057175 680.365016599922 685.369030416642 74.062 0.45177 74.062 73.828 74.28 0 116 33 5 0 0 0 0.0066716 1 44554 41.684 41.684 1 0.82829 0.81574 0 14560000 8631500 5928700 787 1491 319 326 1229 1229 AENAGLSSTAGLLR 14 0 1 Unmodified _AENAGLSSTAGLLR_ 0 0 0 Q5U079;Q53HP8;P17275 Q5U079 Q5U079 JUNB Transcription factor jun-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.3656 2 680.364973 1358.71539 72481.8 0.53696 0.00036533 0.31013 0.000211 0.84709 0.00057633 680.364941021202 685.369462056951 86.115 0.58012 86.115 85.839 86.419 0 128 40 5 0 0 0 0.046269 1 47160 26.532 26.532 1 1.1997 1.0282 0 6136100 3266800 2869300 788 1491 319 326 1230 1230 AENAGLSSTAGLLR 14 0 1 Unmodified _AENAGLSSTAGLLR_ 0 0 0 Q5U079;Q53HP8;P17275 Q5U079 Q5U079 JUNB Transcription factor jun-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.3658 2 680.364973 1358.71539 72405.68 0.60703 0.000413 0.21902 0.00014901 0.82604 0.00056201 680.365218432323 685.369415353262 86.171 0.54245 86.171 85.916 86.458 0 112 28 7 0 0 0 0.0012489 1 46404 55.04 55.04 1 1.4867 1.237 0 6141900 2899600 3242300 789 1491 319 326 1231 1231 AENFFILR 8 0 1 Unmodified _AENFFILR_ 0 0 0 F8WDD7;F8WCF6;A0A0A6YYG9;P59998;R4GN08 F8WDD7 F8WDD7 ARPC4;ARPC4-TTLL3 Actin-related protein 2/3 complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.2809 2 505.276909 1008.53927 86912.92 0.68331 0.00034526 -0.30499 -0.0001541 0.37832 0.00019116 505.27679678855 510.280645796728 98.491 0.62522 98.491 98.231 98.856 0 108 50 4 0 0 0 0.0050709 1 60168 91.626 63.52 1 1.5335 1.6033 0 13082000 5723300 7358800 790 492 320 327 1232 1232 AENLVLSTNLR 11 0 1 Unmodified _AENLVLSTNLR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.3499 2 615.346052 1228.67755 78140.76 0.3031 0.00018651 -0.24315 -0.00014962 0.059953 3.6892E-05 615.345577160277 620.350148415071 77.736 0.58173 77.736 77.485 78.067 0 162 43 6 0 0 0 0.00040908 1 45987 80.763 59.391 1 0.89091 0.89347 0 16166000 8696000 7469800 791 1581 321 328 1233 1233 AENLVLSTNLR 11 0 1 Unmodified _AENLVLSTNLR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.3459 2 615.346052 1228.67755 78110.56 0.15691 9.6551E-05 -0.26227 -0.00016139 -0.10537 -6.4837E-05 615.345755697718 620.350125215511 76.671 0.50969 76.671 76.421 76.93 0 136 38 6 0 0 0 0.0074408 1 46237 52.6 37.926 1 0.96433 0.96673 0 18014000 8707400 9306100 792 1581 321 328 1234 1234 AENLVLSTNLR 11 0 1 Unmodified _AENLVLSTNLR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.3508 2 615.346052 1228.67755 79199.11 0.26893 0.00016548 -1.0206 -0.000628 -0.75164 -0.00046252 615.345116944966 620.349710254744 88.973 0.58221 88.973 88.661 89.243 0 132 37 5 0 0 0 0.014428 1 48250 46.844 39.716 1 1.8579 1.6566 0 2336600 811520 1525100 793 1581 321 328 1235 1235 AENNSEVGASGYGVPGPTWDR 21 0 1 Unmodified _AENNSEVGASGYGVPGPTWDR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1087.4956 2 1081.99051 2161.96647 58992.74 -0.1571 -0.00016998 -0.22342 -0.00024174 -0.38052 -0.00041172 1082.4927572764 1087.49650643022 81.344 0.7373 81.344 81.004 81.741 0 341 63 7 0 0 0 6.9352E-09 4 48314 84.508 81.379 1 1.092 1.1333 0 37782000 17004000 20778000 794 1691 322 329 1236;1237;1238;1239 1238 AENNSEVGASGYGVPGPTWDR 21 0 1 Unmodified _AENNSEVGASGYGVPGPTWDR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1082.4918 2 1081.99051 2161.96647 59149.77 0.1914 0.0002071 -0.0040672 -4.4007E-06 0.18734 0.00020269 1082.49207258682 1086.9948782843 80.404 0.71527 80.404 80.088 80.803 0 278 57 7 0 0 0 2.209E-11 3 48862 96.673 96.673 1 1.001 1.0965 0 31756000 15290000 16466000 795 1691 322 329 1240;1241;1242 1242 AENNSEVGASGYGVPGPTWDR 21 0 1 Unmodified _AENNSEVGASGYGVPGPTWDR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1086.9943 2 1081.99051 2161.96647 57917.33 0.092364 9.9937E-05 -0.090519 -9.7941E-05 0.0018449 1.9961E-06 1082.49225625403 1086.99498613429 93.141 0.78981 93.141 92.871 93.661 0 270 50 8 0 0 0 0.015126 1 51872 23.481 23.481 1 1.5349 1.2684 0 19289000 7882700 11406000 796 1691 322 329 1243 1243 AENNSEVGASGYGVPGPTWDR 21 0 1 Unmodified _AENNSEVGASGYGVPGPTWDR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1086.9952 2 1081.99051 2161.96647 57516.91 -0.075211 -8.1377E-05 -0.093577 -0.00010125 -0.16879 -0.00018263 1082.49221275809 1086.9948195971 93.152 0.76862 93.152 92.862 93.63 0 267 46 8 0 0 0 0.028999 1 51006 22.214 22.214 1 1.5801 1.3 0 14054000 6261700 7791900 797 1691 322 329 1244 1244 AENPYLFLR 9 0 1 Unmodified _AENPYLFLR_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.8016 2 561.800749 1121.58694 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.283 1 91.283 90.783 91.783 0 0 0 0 0.04842 1 55237 47.082 29.696 1 798 1122 323 330 1245 1245 AENPYLFLR 9 0 1 Unmodified _AENPYLFLR_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.8044 2 561.800749 1121.58694 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.571 1 91.571 91.071 92.071 -7.6294E-06 0 0 0 0.003213 1 55455 74.127 54.65 1 799 1122 323 330 1246 1246 AENPYLFLR 9 0 1 Unmodified _AENPYLFLR_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.8015 2 561.800749 1121.58694 79286.11 1.0626 0.00059695 0.73587 0.00041341 1.7984 0.0010104 561.800908568579 566.805308285364 90.712 0.45406 90.712 90.484 90.938 0 77 34 5 0 0 0 0.0074258 1 56073 61.999 52.785 1 1.0911 1.0775 0 14968000 8612100 6355700 800 1122 323 330 1247 1247 AENPYLFLR 9 0 1 Unmodified _AENPYLFLR_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.8055 2 561.800749 1121.58694 NaN NaN NaN -0.71808 -0.00040342 NaN NaN NaN NaN 90.552 0.4545 90.552 90.254 90.709 0 0 0 0 0.016025 1 55959 61.999 46.337 1 NaN NaN 0 4909800 0 4909800 801 1122 323 330 1248 1248 AENPYLFLR 9 0 1 Unmodified _AENPYLFLR_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.8009 2 561.800749 1121.58694 82797.46 0.62142 0.00034911 -0.15747 -8.8465E-05 0.46395 0.00026065 561.800717666592 566.80454376526 104.63 0.68883 104.63 104.28 104.97 0 120 41 5 0 0 0 0.032386 2 59565 45.081 37.861 1 1.0055 0.88078 0 1846200 823660 1022600 802 1122 323 330 1249;1250 1250 AENPYLFLR 9 0 1 Unmodified _AENPYLFLR_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.8014 2 561.800749 1121.58694 82125.01 0.4531 0.00025455 0.0025844 1.4519E-06 0.45568 0.000256 561.800705170831 566.804783596476 104.38 0.51644 104.38 104.14 104.65 7.6294E-06 108 31 5 0 0 0 0.020055 2 58552 50.607 41.393 1 1.1182 0.97802 0 2558000 1068800 1489300 803 1122 323 330 1251;1252 1252 AENSSLNLIGK 11 1 0 Unmodified _AENSSLNLIGK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.318 2 573.311677 1144.6088 81309.16 0.5214 0.00029892 -0.86474 -0.00049577 -0.34334 -0.00019684 573.311738846323 577.31764984803 58.922 0.48865 58.922 58.649 59.138 0 114 38 4 0 0 0 0.0017859 1 33476 64.841 56.62 1 1.3204 1.3764 0 12278000 4970800 7307500 804 1096 324 331 1253 1253 AENYDIPSADR 11 0 1 Unmodified _AENYDIPSADR_ 0 0 0 A0A024R1A3;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2;Q8WY81 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.7902 2 625.786024 1249.55749 79407.27 0.39291 0.00024588 0.20883 0.00013068 0.60174 0.00037656 625.786003806915 630.790075813837 48.934 0.3929 48.934 48.733 49.126 3.8147E-06 86 31 4 0 0 0 0.0251 2 23869 41.399 41.399 1 1.2778 1.1293 0 1596400 663970 932400 805 74 325 332 1254;1255 1254 AEPAAPPAAPSTPAPPPAVPK 21 1 0 Unmodified _AEPAAPPAAPSTPAPPPAVPK_ 0 0 0 P48634 P48634 P48634 PRRC2A Protein PRRC2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 971.5317 2 967.522733 1933.03091 63587.32 -0.068243 -6.6027E-05 0.50449 0.00048811 0.43625 0.00042208 968.024709387375 971.530714931439 74.772 0.22277 74.772 74.658 74.88 0 63 19 5 0 0 0 1.3789E-06 2 43867 50.102 50.102 1 1.6549 1.6285 0 8637300 3387100 5250200 806 1576 326 333 1256;1257 1256 AEPAAPPAAPSTPAPPPAVPK 21 1 0 Unmodified _AEPAAPPAAPSTPAPPPAVPK_ 0 0 0 P48634 P48634 P48634 PRRC2A Protein PRRC2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 972.0338 2 967.522733 1933.03091 65474.81 0.15898 0.00015382 -0.069953 -6.7681E-05 0.089028 8.6137E-05 967.521810433318 971.53051626795 73.78 0.35203 73.78 73.601 73.953 0 76 27 6 0 0 0 0.00033962 2 44294 36.445 36.445 1 1.4286 1.4447 0 8843400 4187700 4655700 807 1576 326 333 1258;1259 1258 AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR 31 0 2 Unmodified _AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR_ 0 0 1 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1105.165 3 1098.15902 3291.45522 57603.1 0.26667 0.00029285 -0.43894 -0.00048203 -0.17227 -0.00018918 1098.49321666464 1105.16455778931 93.647 0.65949 93.647 93.287 93.947 0 495 57 11 0 0 0 2.156E-26 2 56877 78.311 78.311 1 0.76482 0.83365 0 109810000 56241000 53572000 808 1618 327 334 1260;1261 1261 AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR 31 0 2 Unmodified _AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR_ 0 0 1 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1105.4998 3 1098.15902 3291.45522 57349.6 0.2183 0.00023973 -0.53169 -0.00058388 -0.31339 -0.00034415 1098.49304011623 1105.16428708385 92.982 0.66058 92.982 92.666 93.326 0 462 55 11 0 0 0 1.4804E-36 5 57553 107.45 107.45 1 0.83002 0.96763 0 97808000 49886000 47923000 809 1618 327 334 1262;1263;1264;1265;1266 1264 AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR 31 0 2 Unmodified _AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR_ 0 0 1 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1098.4934 3 1098.15902 3291.45522 57469.2 0.14591 0.00016024 -0.05835 -6.4077E-05 0.087565 9.6161E-05 1098.493246871 1105.16546214194 106.9 0.67456 106.9 106.59 107.26 7.6294E-06 423 42 14 0 0 0 4.1157E-08 2 61042 47.429 47.429 1 1.1006 0.88902 0 55565000 24019000 31545000 810 1618 327 334 1267;1268 1267 AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR 31 0 2 Unmodified _AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR_ 0 0 1 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1098.4935 3 1098.15902 3291.45522 57646.59 0.12413 0.00013631 0.10234 0.00011239 0.22647 0.0002487 1098.49347586218 1105.16557805465 106.84 0.7821 106.84 106.51 107.29 7.6294E-06 450 48 14 0 0 0 2.6257E-12 3 60117 54.683 54.683 1 1.1498 1.0789 0 50707000 23579000 27128000 811 1618 327 334 1269;1270;1271 1271 AEPEDHYFLLTEPPLNTPENR 21 0 1 Unmodified _AEPEDHYFLLTEPPLNTPENR_ 0 0 0 A0A024RAI1;P61158;B4DT29;B4DXW1;Q59FV6;F8WDR7 A0A024RAI1 A0A024RAI1 ACTR3 Actin-related protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.7373 3 828.067683 2481.18122 67314.16 0.83888 0.00069465 -0.30851 -0.00025547 0.53037 0.00043918 828.401815610103 831.737998736173 104.41 0.59716 104.41 104.09 104.69 0 229 49 7 0 0 0 4.2842E-07 1 64373 49.973 49.973 1 1.7841 1.8655 0 13059000 5108400 7950900 812 304 328 335 1272 1272 AEPEDHYFLLTEPPLNTPENR 21 0 1 Unmodified _AEPEDHYFLLTEPPLNTPENR_ 0 0 0 A0A024RAI1;P61158;B4DT29;B4DXW1;Q59FV6;F8WDR7 A0A024RAI1 A0A024RAI1 ACTR3 Actin-related protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.0721 3 828.067683 2481.18122 67399.39 0.31588 0.00026157 0.2242 0.00018565 0.54008 0.00044722 828.402269466578 831.738531479688 103.52 0.65084 103.52 103.18 103.84 0 274 54 8 0 0 0 2.7704E-07 1 65430 54.834 54.834 1 1.9143 1.928 0 19453000 6035400 13417000 813 304 328 335 1273 1273 AEPEDHYFLLTEPPLNTPENR 21 0 1 Unmodified _AEPEDHYFLLTEPPLNTPENR_ 0 0 0 A0A024RAI1;P61158;B4DT29;B4DXW1;Q59FV6;F8WDR7 A0A024RAI1 A0A024RAI1 ACTR3 Actin-related protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.7388 3 828.067683 2481.18122 67297.05 1.0525 0.00087157 -0.075553 -6.2563E-05 0.97698 0.000809 828.401839917173 831.738272827654 115.31 0.39967 115.31 115.1 115.5 7.6294E-06 106 17 9 0 0 0 2.2247E-05 1 67570 41.257 41.257 1 2.7167 2.3081 0 5254300 1578800 3675500 814 304 328 335 1274 1274 AEPEDHYFLLTEPPLNTPENR 21 0 1 Unmodified _AEPEDHYFLLTEPPLNTPENR_ 0 0 0 A0A024RAI1;P61158;B4DT29;B4DXW1;Q59FV6;F8WDR7 A0A024RAI1 A0A024RAI1 ACTR3 Actin-related protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.739 3 828.067683 2481.18122 66911.34 0.81472 0.00067464 0.034818 2.8832E-05 0.84954 0.00070347 828.402122485531 831.738205913637 115.12 0.57551 115.12 114.83 115.41 0 121 28 7 0 0 0 0.00061969 1 66522 33.024 33.024 1 2.1624 1.9057 0 4115100 1195000 2920100 815 304 328 335 1275 1275 AEPGEGTRPATVGDSSAR 18 0 2 Unmodified _AEPGEGTRPATVGDSSAR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.9536 3 586.618611 1756.834 77487.98 0.23651 0.00013874 0.77324 0.0004536 1.0097 0.00059233 586.618895862146 593.291360829183 22.398 0.39322 22.398 22.227 22.62 0 75 15 7 0 0 0 0.00019632 1 7180 31.111 29.42 1 1.8262 1.5586 0 6718400 2169600 4548800 816 2002 329 336 1276 1276 AEPGEGTRPATVGDSSAR 18 0 2 Unmodified _AEPGEGTRPATVGDSSAR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.9531 3 586.618611 1756.834 78803.72 0.20189 0.00011843 0.35062 0.00020568 0.55251 0.00032411 586.618790881357 593.291082468048 22.422 0.51433 22.422 22.222 22.737 0 105 22 9 0 0 0 1.9176E-05 2 6756 46.621 44.971 1 1.8779 1.7002 0 4778200 1567600 3210500 817 2002 329 336 1277;1278 1278 AEPGFEPADCK 11 1 0 Unmodified _AEPGFEPADCK_ 0 0 0 P17676 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.7732 2 610.766245 1219.51794 82803.55 0.34677 0.0002118 -0.45009 -0.0002749 -0.10332 -6.3105E-05 610.766105167085 614.772605608494 34.121 0.51829 34.121 33.75 34.268 -3.8147E-06 84 40 4 0 0 0 0.0073354 2 17166 52.79 51.295 1 1.1737 1.1823 0 7263300 4024600 3238700 818 1493 330 337 1279;1280 1279 AEPGFEPADCK 11 1 0 Unmodified _AEPGFEPADCK_ 0 0 0 P17676 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.7729 2 610.766245 1219.51794 78525.62 0.17028 0.000104 0.24099 0.00014719 0.41127 0.00025119 610.766404985349 614.773453703356 39.58 0.62455 39.58 39.23 39.855 0 189 47 6 0 0 0 0.01938 2 17995 44.318 44.318 1 1.7156 1.3356 0 3721200 1298800 2422400 819 1493 330 337 1281;1282 1281 AEPGFEPADCK 11 1 0 Unmodified _AEPGFEPADCK_ 0 0 0 P17676 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.7741 2 610.766245 1219.51794 77682.98 0.22795 0.00013922 0.38623 0.00023589 0.61417 0.00037512 610.766543033997 614.773535224804 39.693 0.56008 39.693 39.4 39.96 0 210 42 6 0 0 0 0.0081792 2 17646 51.268 51.268 1 1.5552 1.2118 0 3500000 1533500 1966500 820 1493 330 337 1283;1284 1283 AEPSFYPR 8 0 1 Unmodified _AEPSFYPR_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7416 2 483.737617 965.460681 86009.27 0.37077 0.00017936 0.11771 5.6941E-05 0.48848 0.0002363 483.737707847556 488.741647253079 48.719 0.87821 48.719 48.253 49.131 0 277 68 6 0 0 0 0.013558 2 26472 65.038 35.465 1 0.8949 1.0151 0 108260000 54482000 53782000 821 2042 331 338 1285;1286 1285 AEPSFYPR 8 0 1 Unmodified _AEPSFYPR_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.7412 2 483.737617 965.460681 85736.8 0.39746 0.00019227 0.0032489 1.5716E-06 0.40071 0.00019384 483.73765628126 488.741586523636 47.496 0.5703 47.496 47.179 47.749 0 182 40 6 0 0 0 0.019774 1 26223 58.917 45.246 1 0.92547 1.0594 0 165090000 80317000 84769000 822 2042 331 338 1287 1287 AEPSFYPR 8 0 1 Unmodified _AEPSFYPR_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.7379 2 483.737617 965.460681 86796.27 0.22713 0.00010987 0.27796 0.00013446 0.5051 0.00024433 483.737654047084 488.741759583456 55.822 0.95578 55.822 55.363 56.319 3.8147E-06 286 60 7 0 0 0 0.051374 1 27928 43.246 15.722 1 1.1979 1.0148 0 9357100 4399900 4957200 823 2042 331 338 1288 1288 AEPTAAPHPVLK 12 1 0 Unmodified _AEPTAAPHPVLK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.8469 2 615.845687 1229.67682 79296.81 0.83533 0.00051443 -0.35621 -0.00021937 0.47912 0.00029506 615.845618441207 619.852524196523 32.044 0.49633 32.044 31.762 32.258 0 106 48 4 0 0 0 0.0038224 2 15856 55.064 41.069 1 0.81636 0.8401 0 14536000 8253000 6283400 824 229 332 339 1289;1290 1290 AEPTAAPHPVLK 12 1 0 Unmodified _AEPTAAPHPVLK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.8459 2 615.845687 1229.67682 80596.59 0.30464 0.00018761 -0.23229 -0.00014306 0.072349 4.4556E-05 615.845495923806 619.852659164425 31.19 0.42332 31.19 30.964 31.388 1.9073E-06 92 36 5 0 0 0 0.00019045 1 15470 76.815 55.351 1 0.51838 0.5304 0 11898000 8927600 2970600 825 229 332 339 1291 1291 AEPTAAPHPVLK 12 1 0 Unmodified _AEPTAAPHPVLK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.3524 2 615.845687 1229.67682 78582.41 0.42889 0.00026413 -1.2625 -0.00077749 -0.83358 -0.00051336 615.845366667674 620.352347901872 36.362 0.54216 36.362 35.995 36.537 0 139 49 5 0 0 0 0.02008 2 15751 39.622 39.622 1 2.5109 1.9641 0 3385200 1178200 2207000 826 229 332 339 1292;1293 1292 AEPVEVVAPR 10 0 1 Unmodified _AEPVEVVAPR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.798 2 533.798206 1065.58186 82918.3 0.60143 0.00032104 0.034842 1.8598E-05 0.63627 0.00033964 533.798122114304 538.802511934891 51.398 0.68199 51.398 50.866 51.548 -3.8147E-06 176 63 6 0 0 0 0.0007117 2 28404 82.452 63.67 1 0.85288 1.0107 0 491530000 272500000 219030000 827 139 333 340 1294;1295 1295 AEPVEVVAPR 10 0 1 Unmodified _AEPVEVVAPR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.799 2 533.798206 1065.58186 NaN NaN NaN -0.24786 -0.00013231 NaN NaN NaN NaN 50.406 0.8054 50.406 49.951 50.756 3.8147E-06 0 0 0 0.015301 1 28210 57.859 43.863 1 NaN NaN 0 326220000 326220000 0 828 139 333 340 1296 1296 AEPYCSVLPGFTFIQHLPLSER 22 0 1 Unmodified _AEPYCSVLPGFTFIQHLPLSER_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0;M0QYZ0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.7708 3 854.43342 2560.27843 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.82 1 128.82 128.32 129.32 0 0 0 0 1.2669E-07 1 86068 73.405 65.316 1 829 49 334 341 1297 1297 AEQAFQASQIK 11 1 0 Unmodified _AEQAFQASQIK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8248 2 610.817127 1219.6197 78818.59 0.46356 0.00028315 -0.27753 -0.00016952 0.18603 0.00011363 610.817162117419 614.824034524442 39.614 0.43785 39.614 39.337 39.775 0 117 35 6 0 0 0 0.00033089 2 20583 86.898 74.31 1 1.0167 1.0502 0 14662000 9238600 5422900 830 1581 335 342 1298;1299 1299 AEQAFQASQIK 11 1 0 Unmodified _AEQAFQASQIK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.8249 2 610.817127 1219.6197 78741.02 0.51723 0.00031593 0.33708 0.00020589 0.85431 0.00052183 610.817417008268 614.824230034721 38.568 0.35999 38.568 38.353 38.713 0 94 31 4 0 0 0 1.4137E-05 1 20215 107.21 92.34 1 1.1822 1.2749 0 21764000 9333800 12430000 831 1581 335 342 1300 1300 AEQAFQASQIK 11 1 0 Unmodified _AEQAFQASQIK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.825 2 610.817127 1219.6197 78383.65 0.34329 0.00020969 -0.036423 -2.2248E-05 0.30687 0.00018744 610.817394866325 614.824376881226 45.337 0.39012 45.337 45.14 45.531 0 109 27 6 0 0 0 0.014826 3 21664 46.64 42.21 1 2.0103 1.6857 0 2186000 812750 1373300 832 1581 335 342 1301;1302;1303 1303 AEQAFQASQIK 11 1 0 Unmodified _AEQAFQASQIK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.825 2 610.817127 1219.6197 NaN NaN NaN 0.0036429 2.2252E-06 NaN NaN NaN NaN 45.413 0.37262 45.413 45.234 45.607 0 0 0 0 0.0036111 1 21147 67.207 55.717 1 NaN NaN 0 1648000 0 1648000 833 1581 335 342 1304 1304 AEQEEYVQEGIR 12 0 1 Unmodified _AEQEEYVQEGIR_ 0 0 0 Q4KMR3;Q12965;Q6ZNI9;O00160;H0YLE5;M0QXU2 Q4KMR3 Q4KMR3 MYO1E;FLJ00395;MYO1F Unconventional myosin-Ie;Unconventional myosin-If ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.3505 2 725.84407 1449.67359 NaN NaN NaN -0.16359 -0.00011874 NaN NaN NaN NaN 44.687 0.53409 44.687 44.347 44.881 0 0 0 0 4.3676E-20 1 23866 137.98 90.153 1 NaN NaN 0 12803000 0 12803000 834 1703 336 343 1305 1305 AEQEEYVQEGIR 12 0 1 Unmodified _AEQEEYVQEGIR_ 0 0 0 Q4KMR3;Q12965;Q6ZNI9;O00160;H0YLE5;M0QXU2 Q4KMR3 Q4KMR3 MYO1E;FLJ00395;MYO1F Unconventional myosin-Ie;Unconventional myosin-If MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.8499 2 725.84407 1449.67359 72364.84 1.927 0.0013987 -0.24121 -0.00017508 1.6858 0.0012236 725.843853648444 730.848252653482 43.739 0.4984 43.739 43.542 44.04 0 161 39 6 0 0 0 4.5357E-08 2 23736 115.18 84.491 1 0.85485 0.92479 0 27085000 17580000 9505700 835 1703 336 343 1306;1307 1306 AEQEEYVQEGIR 12 0 1 Unmodified _AEQEEYVQEGIR_ 0 0 0 Q4KMR3;Q12965;Q6ZNI9;O00160;H0YLE5;M0QXU2 Q4KMR3 Q4KMR3 MYO1E;FLJ00395;MYO1F Unconventional myosin-Ie;Unconventional myosin-If ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.8441 2 725.84407 1449.67359 NaN NaN NaN 1.8669 0.001355 NaN NaN NaN NaN 52.219 0.3617 52.219 52.013 52.375 0 0 0 0 0.033878 1 25750 63.046 48.108 1 NaN NaN 0 1899900 1899900 0 836 1703 336 343 1308 1308 AEQEIAALVEQLTPIER 17 0 1 Unmodified _AEQEIAALVEQLTPIER_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 961.0203 2 955.515105 1909.01566 62529.84 1.1546 0.0011032 0.95935 0.00091668 2.114 0.0020199 955.513247300143 961.020498609879 127.21 0.45876 127.21 126.97 127.42 -7.6294E-06 99 24 7 0 0 0 2.1051E-05 3 82842 83.499 83.499 1 0.61943 0.63172 0 6820300 3775400 3044800 837 476 337 344 1309;1310;1311 1310 AEQEIAALVEQLTPIER 17 0 1 Unmodified _AEQEIAALVEQLTPIER_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 960.5178 2 955.515105 1909.01566 NaN NaN NaN -0.4577 -0.00043734 NaN NaN NaN NaN 126.85 0.27983 126.85 126.66 126.94 0 0 0 0 1.0702E-06 1 84650 83.499 74.212 1 NaN NaN 0 2901400 0 2901400 838 476 337 344 1312 1312 AEQGSEEEGEGEEEEEEGGESK 22 1 0 Unmodified _AEQGSEEEGEGEEEEEEGGESK_ 0 0 0 Q8NE71;B4DNU2;Q5STZ8 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1181.4561 2 1177.44913 2352.88371 NaN NaN NaN 0.27669 0.00032579 NaN NaN NaN NaN 18.238 0.13172 18.238 18.154 18.285 0 0 0 0 0.0062044 1 4960 38.028 38.028 1 NaN NaN 0 1853700 0 1853700 839 1926 338 345 1313 1313 AEQINQAAGEASAVLAK 17 1 0 Unmodified _AEQINQAAGEASAVLAK_ 0 0 0 Q9UJZ1;A0A087WYB4;F2Z2I8;Q6ZNW0 Q9UJZ1 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 839.9476 2 835.939033 1669.86351 NaN NaN NaN -0.12235 -0.00010228 NaN NaN NaN NaN 77.04 0.45601 77.04 76.866 77.322 0 0 0 0 4.6665E-09 1 45438 97.69 84.262 1 NaN NaN 0 7032300 0 7032300 840 2104 339 346 1314 1314 AEQLAAEAER 10 0 1 Unmodified _AEQLAAEAER_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.2773 2 544.272552 1086.53055 NaN NaN NaN -0.19883 -0.00010822 NaN NaN NaN NaN 25.45 0.2083 25.45 25.352 25.56 -1.9073E-06 0 0 0 0.0020262 1 11046 82.749 34.188 1 NaN NaN 0 3834300 0 3834300 841 1838 340 347 1315 1315 AEQLGAEGNVDESQK 15 1 0 Unmodified _AEQLGAEGNVDESQK_ 0 0 0 B8ZZ09;B8ZZ10;A8MYV2;D3DU41;Q1W6G4;Q53G47;Q9NQ29 B8ZZ09 B8ZZ09 LUC7L Putative RNA-binding protein Luc7-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.8743 2 787.868273 1573.72199 68777.7 0.35715 0.00028139 -1.1781 -0.00092818 -0.82093 -0.00064679 788.368530137543 791.874928990727 27.107 0.29869 27.107 26.978 27.276 -1.9073E-06 50 14 6 0 0 0 0.00022118 2 12364 65.563 65.563 1 0.49444 0.49882 0 5478600 3612000 1866600 842 800 341 348 1316;1317 1316 AEQLGAEGNVDESQK 15 1 0 Unmodified _AEQLGAEGNVDESQK_ 0 0 0 B8ZZ09;B8ZZ10;A8MYV2;D3DU41;Q1W6G4;Q53G47;Q9NQ29 B8ZZ09 B8ZZ09 LUC7L Putative RNA-binding protein Luc7-like 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.8688 2 787.868273 1573.72199 NaN NaN NaN -1.74 -0.0013709 NaN NaN NaN NaN 26.719 0.24995 26.719 26.572 26.822 -1.9073E-06 0 0 0 0.00067645 1 12115 67.997 58.31 1 NaN NaN 0 7145400 7145400 0 843 800 341 348 1318 1318 AEQLGAEGNVDESQK 15 1 0 Unmodified _AEQLGAEGNVDESQK_ 0 0 0 B8ZZ09;B8ZZ10;A8MYV2;D3DU41;Q1W6G4;Q53G47;Q9NQ29 B8ZZ09 B8ZZ09 LUC7L Putative RNA-binding protein Luc7-like 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.8755 2 787.868273 1573.72199 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.709 1 26.709 26.209 27.209 -1.9073E-06 0 0 0 0.0015793 1 12096 70.622 53.254 1 844 800 341 348 1319 1319 AEQMHQSFVAETSQR 15 0 1 Oxidation (M) _AEQM(ox)HQSFVAETSQR_ AEQM(1)HQSFVAETSQR AEQM(56.95)HQSFVAETSQR 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.9062 2 882.902125 1763.7897 66115.39 0.43573 0.00038471 0.27865 0.00024602 0.71438 0.00063072 882.902351726401 887.90656096353 23.659 0.17818 23.659 23.57 23.748 0 18 6 5 0 0 0 0.00022437 1 9495 56.951 53.527 1 1.3697 1.3611 0 7456700 3518600 3938100 845 1581 342 349 1320 1320 1360 AESEASLLNVSTPK 14 1 0 Unmodified _AESEASLLNVSTPK_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.3851 2 723.377746 1444.74094 NaN NaN NaN -0.6753 -0.0004885 NaN NaN NaN NaN 75.975 0.52551 75.975 75.752 76.278 0 0 0 0 3.5632E-06 1 44740 97.911 84.142 1 NaN NaN 0 7303800 0 7303800 846 1984 343 350 1321 1321 AESEASLLNVSTPK 14 1 0 Unmodified _AESEASLLNVSTPK_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.3851 2 723.377746 1444.74094 75160.43 0.61826 0.00044723 -0.0025686 -1.858E-06 0.61569 0.00044538 723.377676371034 727.384830494825 87.137 0.62691 87.137 86.864 87.491 0 155 34 7 0 0 0 0.000117 3 47913 82.362 73.173 1 3.1528 2.4599 0 3778000 944920 2833100 847 1984 343 350 1322;1323;1324 1323 AESGDSLGSEDRDLLYSIDAYR 22 0 2 Unmodified _AESGDSLGSEDRDLLYSIDAYR_ 0 0 1 B4DSL6;A8K5D9;A0A024RA49;Q9NQW6 B4DSL6 B4DSL6 ANLN Actin-binding protein anillin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.713 3 811.378585 2431.11393 69931.39 0.79636 0.00064615 0.20067 0.00016282 0.99703 0.00080897 811.378474535475 818.050737103641 103.5 0.59404 103.5 103.24 103.83 -7.6294E-06 107 47 5 0 0 0 0.0017187 3 63960 28.412 28.412 1 1.6731 1.8646 0 8378600 2830700 5547900 848 294 344 351 1325;1326;1327 1327 AESLIGVYPEQGDCVISK 18 1 0 Unmodified _AESLIGVYPEQGDCVISK_ 0 0 0 Q14683;G8JLG1 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 986.9921 2 982.985323 1963.95609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.713 1 95.713 95.213 96.213 0 0 0 0 0.0040491 1 58254 51.463 29.232 1 849 1739 345 352 1328 1328 AESLQQEVEALK 12 1 0 Unmodified _AESLQQEVEALK_ 0 0 0 Q6AWB3;Q6AWB1;E7EX90;Q6MZZ3;Q14203;Q59F36 Q6AWB3 Q6AWB3 DKFZp686E191;DKFZp686E0752;DCTN1;DKFZp686I0746 Dynactin subunit 1 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.8607 2 672.853906 1343.69326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.385 1 96.385 95.885 96.885 7.6294E-06 0 0 0 0.0098018 1 54096 57.174 42.876 1 850 1226 346 353 1329 1329 AESTLQNSSSAVHTESNK 18 1 0 Unmodified _AESTLQNSSSAVHTESNK_ 0 0 0 A0A0C4DFX7;Q9H967;C9JE56 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.9473 2 945.445408 1888.87626 64840.94 0.34061 0.00032203 0.21223 0.00020065 0.55284 0.00052268 945.947044872969 949.452331272176 20.161 0.15976 20.161 20.078 20.237 0 17 4 6 0 0 0 6.4667E-08 1 6664 93.348 93.348 1 0.65026 0.64436 0 19228000 11368000 7859600 851 508 347 354 1330 1330 AESTLQNSSSAVHTESNK 18 1 0 Unmodified _AESTLQNSSSAVHTESNK_ 0 0 0 A0A0C4DFX7;Q9H967;C9JE56 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.6326 3 630.632697 1888.87626 75203.15 0.34061 0.0002148 -0.04013 -2.5307E-05 0.30048 0.00018949 630.632852346841 633.304297188686 20.162 0.30157 20.162 20.043 20.345 0 40 9 8 0 0 0 0.00028809 1 6682 44.998 34.513 1 0.695 0.73894 0 31696000 17786000 13909000 852 508 347 354 1331 1331 AESTLQNSSSAVHTESNK 18 1 0 Unmodified _AESTLQNSSSAVHTESNK_ 0 0 0 A0A0C4DFX7;Q9H967;C9JE56 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.6392 3 630.632697 1888.87626 75193.95 0.45452 0.00028663 -0.58567 -0.00036934 -0.13116 -8.2711E-05 630.966773687153 633.303945745201 20.11 0.34589 20.11 19.934 20.28 -1.9073E-06 57 12 9 0 0 0 4.3845E-64 2 6398 147.56 136.93 1 0.6803 0.68829 0 28954000 16849000 12105000 853 508 347 354 1332;1333 1332 AESTLQNSSSAVHTESNK 18 1 0 Unmodified _AESTLQNSSSAVHTESNK_ 0 0 0 A0A0C4DFX7;Q9H967;C9JE56 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.9468 2 945.445408 1888.87626 62910.55 0.34552 0.00032667 -0.31813 -0.00030077 0.027388 2.5894E-05 945.445064092268 949.953220496135 20.074 0.19479 20.074 19.997 20.192 0 34 6 7 0 0 0 1.5161E-50 2 6405 164.68 155.49 1 0.72953 0.73786 0 8911300 5095600 3815700 854 508 347 354 1334;1335 1334 AESTLQNSSSAVHTESNK 18 1 0 Unmodified _AESTLQNSSSAVHTESNK_ 0 0 0 A0A0C4DFX7;Q9H967;C9JE56 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.3049 3 630.632697 1888.87626 76257.28 0.18734 0.00011814 0.047445 2.9921E-05 0.23478 0.00014806 630.63245262977 633.30403484316 22.072 0.60108 22.072 21.889 22.491 0 94 22 8 0 0 0 9.7667E-06 1 6909 58.997 52.966 1 1.1579 0.92318 0 9591600 4562700 5028900 855 508 347 354 1336 1336 AESTLQNSSSAVHTESNK 18 1 0 Unmodified _AESTLQNSSSAVHTESNK_ 0 0 0 A0A0C4DFX7;Q9H967;C9JE56 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.9726 3 630.632697 1888.87626 76198.69 0.2264 0.00014278 0.23124 0.00014583 0.45764 0.0002886 630.632782230631 633.304196373794 22.057 0.36899 22.057 21.83 22.199 0 74 12 9 0 0 0 0.049441 1 6460 16.654 16.654 1 1.1435 0.93199 0 7603100 3639600 3963600 856 508 347 354 1337 1337 AESTLQNSSSAVHTESNK 18 1 0 Unmodified _AESTLQNSSSAVHTESNK_ 0 0 0 A0A0C4DFX7;Q9H967;C9JE56 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 949.9529 2 945.445408 1888.87626 63417.25 0.1554 0.00014693 -0.11066 -0.00010462 0.044748 4.2307E-05 945.444904698795 949.452552000244 22.067 0.28362 22.067 21.891 22.175 0 44 9 8 0 0 0 0.0092426 1 6498 29.981 26.556 1 1.1455 0.89063 0 2144800 869650 1275200 857 508 347 354 1338 1338 AETECQNTEYQQLLDIK 17 1 0 Unmodified _AETECQNTEYQQLLDIK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1042.4886 2 1041.98605 2081.95755 NaN NaN NaN -0.17191 -0.00017913 NaN NaN NaN NaN 95.355 0.94324 95.355 94.87 95.813 0 0 0 0 1.1354E-106 2 58233 217.09 209.63 1 NaN NaN 0 130630000 130630000 0 + 858 1161 348 355 1339;1340 1340 AETECQNTEYQQLLDIK 17 1 0 Unmodified _AETECQNTEYQQLLDIK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1042.4877 2 1041.98605 2081.95755 NaN NaN NaN -0.2391 -0.00024914 NaN NaN NaN NaN 94.627 0.87696 94.627 94.232 95.108 0 0 0 0 1.1782E-144 3 58601 233.37 220.39 1 NaN NaN 0 201840000 201840000 0 + 859 1161 348 355 1341;1342;1343 1342 AETECQNTEYQQLLDIK 17 1 0 Unmodified _AETECQNTEYQQLLDIK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1041.9856 2 1041.98605 2081.95755 NaN NaN NaN -0.22222 -0.00023155 NaN NaN NaN NaN 108.95 0.90462 108.95 108.6 109.5 7.6294E-06 0 0 0 0.0086499 1 62496 45.115 43.477 1 NaN NaN 0 152550000 152550000 0 + 860 1161 348 355 1344 1344 AETECQNTEYQQLLDIK 17 1 0 Unmodified _AETECQNTEYQQLLDIK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1042.4895 2 1041.98605 2081.95755 NaN NaN NaN -0.27411 -0.00028562 NaN NaN NaN NaN 108.94 1.0906 108.94 108.54 109.63 -7.6294E-06 0 0 0 1.4013E-06 1 61570 80.522 72.611 1 NaN NaN 0 126510000 126510000 0 + 861 1161 348 355 1345 1345 AETHENEPGPLTVGDELLSQFK 22 1 0 Unmodified _AETHENEPGPLTVGDELLSQFK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.7319 3 804.395688 2410.16523 68857.28 1.0556 0.00084914 -0.12702 -0.00010217 0.9286 0.00074696 805.063971012752 807.067672555197 119.6 0.59112 119.6 119.29 119.88 -7.6294E-06 241 39 8 0 0 0 2.2617E-05 1 76866 37.56 37.56 1 0.79488 0.80828 0 13898000 8131200 5766900 862 1366 349 356 1346 1346 AETHENEPGPLTVGDELLSQFK 22 1 0 Unmodified _AETHENEPGPLTVGDELLSQFK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.4019 3 804.395688 2410.16523 68678.48 0.66124 0.0005319 0.69891 0.0005622 1.3601 0.0010941 804.730462851036 807.401658317565 118.92 0.60622 118.92 118.6 119.21 0 195 38 8 0 0 0 1.3372E-07 1 78287 55.988 52.89 1 0.77448 0.77957 0 13494000 7077500 6416000 863 1366 349 356 1347 1347 AETLEFNDVYQEVK 14 1 0 Acetyl (Protein N-term) _(ac)AETLEFNDVYQEVK_ 1 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.4145 2 863.91215 1725.80975 66322.14 1.0189 0.00088024 -0.082592 -7.1352E-05 0.93631 0.00080889 863.911938134293 867.919155283016 118.2 0.65424 118.2 117.86 118.51 7.6294E-06 282 38 10 0 0 0 1.0993E-22 2 75626 150.46 141.13 1 0.72118 0.8176 0 93650000 53740000 39910000 864 167 350 357 1348;1349 1349 AETLEFNDVYQEVK 14 1 0 Acetyl (Protein N-term) _(ac)AETLEFNDVYQEVK_ 1 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.9207 2 863.91215 1725.80975 65804.26 0.95705 0.00082681 -0.062611 -5.4091E-05 0.89444 0.00077271 863.911995082074 867.91911269749 117.82 0.68462 117.82 117.51 118.2 0 326 45 10 0 0 0 4.095E-10 2 77176 124.42 124.42 1 0.70005 0.78222 0 92585000 54894000 37691000 865 167 350 357 1350;1351 1350 AETLEFNDVYQEVK 14 1 0 Acetyl (Protein N-term) _(ac)AETLEFNDVYQEVK_ 1 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 867.9198 2 863.91215 1725.80975 65641.53 0.54244 0.00046862 0.35471 0.00030644 0.89715 0.00077506 863.912287786374 867.919505827458 130.32 0.77354 130.32 130.02 130.8 0 276 38 10 0 0 0 1.5424E-14 2 78883 134.98 125.79 1 0.97588 0.79436 0 31015000 14869000 16146000 866 167 350 357 1352;1353 1353 AETLEFNDVYQEVK 14 1 0 Acetyl (Protein N-term) _(ac)AETLEFNDVYQEVK_ 1 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 867.9197 2 863.91215 1725.80975 65700.46 0.81766 0.00070639 0.19518 0.00016862 1.0128 0.00087501 863.912224352628 867.919455772377 130.3 0.94289 130.3 129.94 130.88 0 274 38 11 0 0 0 1.9466E-09 2 77900 121.08 121.08 1 0.97198 0.80799 0 37931000 20288000 17643000 867 167 350 357 1354;1355 1355 AETPTESVSEPEVATK 16 1 0 Unmodified _AETPTESVSEPEVATK_ 0 0 0 B4E135;M0R0Q7;Q59HG7;P18858 B4E135 B4E135 LIG1 DNA ligase;DNA ligase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.9157 2 837.907064 1673.79958 NaN NaN NaN 0.54879 0.00045984 NaN NaN NaN NaN 48.536 0.38147 48.536 48.346 48.727 0 0 0 0 0.00023059 1 26452 70.438 53.412 1 NaN NaN 0 6323000 0 6323000 868 1066 351 358 1356 1356 AETQGANHTPVISAHQTR 18 0 1 Unmodified _AETQGANHTPVISAHQTR_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.3251 3 639.989038 1916.94529 NaN NaN NaN -0.84297 -0.00053949 NaN NaN NaN NaN 22.071 0.25634 22.071 21.919 22.175 0 0 0 0 0.043656 1 6506 24.594 20.046 1 NaN NaN 0 440770 0 440770 869 476 352 359 1357 1357 AETSEGSGSAPAVPEASASPK 21 1 0 Unmodified _AETSEGSGSAPAVPEASASPK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;B5MCB4;A0A0S2Z401;A0A0D9SFX7;D5L9I4;A0A0S2Z3U3;A0A075BPH5 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 969.9597 2 965.455441 1928.89633 63593.01 -0.2531 -0.00024435 0.17216 0.00016621 -0.080942 -7.8146E-05 965.957232098556 969.462317024518 47.409 0.48336 47.409 47.163 47.646 0 140 37 6 0 0 0 0.060658 1 22401 19.323 19.323 1 0.46368 0.36881 0 3112000 1992100 1120000 870 623 353 360 1358 1358 AEVAPEEDERK 11 1 1 Unmodified _AEVAPEEDERK_ 0 0 1 A0A0A0MRJ2;Q5VTZ4;P18847;Q7Z567 A0A0A0MRJ2 A0A0A0MRJ2 ATF3 Cyclic AMP-dependent transcription factor ATF-3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 424.8737 3 424.87373 1271.59936 NaN NaN NaN -1.0077 -0.00042814 NaN NaN NaN NaN 16.246 0.52924 16.246 16.021 16.551 0 0 0 0 0.042229 2 3658 30.889 22.757 1 NaN NaN 0 1907300 1907300 0 871 466 354 361 1359;1360 1359 AEVEQVELPDGK 12 1 0 Unmodified _AEVEQVELPDGK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.3403 2 657.332807 1312.65106 73667.23 1.0873 0.00071472 -0.13241 -8.7038E-05 0.9549 0.00062768 657.33250801824 661.339910013271 59.459 0.35154 59.459 59.348 59.699 0 98 26 6 0 0 0 6.2813E-48 3 33870 191.52 191.52 1 0.79254 0.89184 0 72401000 38390000 34011000 872 214 355 362 1361;1362;1363 1362 AEVEQVELPDGK 12 1 0 Unmodified _AEVEQVELPDGK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.3393 2 657.332807 1312.65106 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.793 1 59.793 59.293 60.293 0 0 0 0 0.00044238 1 34100 80.24 58.776 1 873 214 355 362 1364 1364 AEVEQVELPDGK 12 1 0 Unmodified _AEVEQVELPDGK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.3416 2 657.332807 1312.65106 72299.7 0.83433 0.00054843 -0.40615 -0.00026697 0.42818 0.00028146 657.332338216458 661.34036551831 58.364 0.5019 58.364 58.241 58.743 0 102 41 6 0 0 0 1.4182E-13 3 33891 137.01 137.01 1 0.74843 0.82916 0 46636000 26744000 19892000 874 214 355 362 1365;1366;1367 1366 AEVEQVELPDGK 12 1 0 Unmodified _AEVEQVELPDGK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.3333 2 657.332807 1312.65106 72987.03 0.52996 0.00034836 0.60236 0.00039595 1.1323 0.00074431 657.332689852131 661.340234800862 69.21 0.62566 69.21 68.824 69.45 0 181 42 8 0 0 0 0.00012438 3 36191 94.363 89.171 1 1.2344 0.98838 0 7259300 3348900 3910400 875 214 355 362 1368;1369;1370 1369 AEVEQVELPDGK 12 1 0 Unmodified _AEVEQVELPDGK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.3415 2 657.332807 1312.65106 74587.83 0.54628 0.00035909 0.71635 0.00047088 1.2626 0.00082997 657.333039495777 661.340291158845 69.808 0.43491 69.808 69.571 70.006 0 163 31 9 0 0 0 0.00019797 2 35745 78.342 72.561 1 1.3169 1.0728 0 7482500 3174800 4307700 876 214 355 362 1371;1372 1371 AEVEQVELPDGKK 13 2 0 Unmodified _AEVEQVELPDGKK_ 0 0 1 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.38 2 721.380288 1440.74602 72853.34 0.69692 0.00050275 -0.17924 -0.0001293 0.51768 0.00037344 721.379982346626 729.394080526318 41.937 0.39507 41.937 41.725 42.12 0 98 36 4 0 0 0 1.3208E-08 1 22516 117.25 100.23 1 0.87719 1.0076 0 23087000 12336000 10751000 877 214 356 363 1373 1373 AEVEQVELPDGKK 13 2 0 Unmodified _AEVEQVELPDGKK_ 0 0 1 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.2556 3 481.255951 1440.74602 86432.51 0.26788 0.00012892 0.2806 0.00013504 0.54848 0.00026396 481.256130793207 486.598747853994 41.932 0.51011 41.932 41.674 42.184 3.8147E-06 190 46 6 0 0 0 0.0035036 1 22554 29.491 22.452 1 0.89273 1.0267 0 24730000 11431000 13299000 878 214 356 363 1374 1374 AEVEQVELPDGKK 13 2 0 Unmodified _AEVEQVELPDGKK_ 0 0 1 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.3813 2 721.380288 1440.74602 71977.11 0.57401 0.00041408 0.20568 0.00014837 0.77968 0.00056245 721.882401886284 729.394282969802 49.601 0.54467 49.601 49.399 49.943 0 149 45 6 0 0 0 0.02053 2 24221 46.592 37.16 1 1.1475 1.0051 0 2898400 1414500 1483900 879 214 356 363 1375;1376 1376 AEVEQVELPDGKK 13 2 0 Unmodified _AEVEQVELPDGKK_ 0 0 1 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.2564 3 481.255951 1440.74602 87445.49 0.087128 4.1931E-05 0.31399 0.00015111 0.40112 0.00019304 481.255997032313 486.598751023342 49.592 0.47372 49.592 49.388 49.862 0 177 40 6 0 0 0 0.056978 1 24235 9.7997 9.7997 1 1.2591 1.0872 0 4736600 2165800 2570900 880 214 356 363 1377 1377 AEVEQVELPDGKK 13 2 0 Unmodified _AEVEQVELPDGKK_ 0 0 1 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.883 2 721.380288 1440.74602 71786.09 0.36696 0.00026472 0.6044 0.000436 0.97136 0.00070072 721.882697060707 729.394382135827 49.866 0.50389 49.866 49.653 50.156 0 200 40 7 0 0 0 0.004521 2 23844 52.693 49.632 1 0.80662 0.69937 0 2693400 1465200 1228300 881 214 356 363 1378;1379 1378 AEVLISTVGPEDCVVPFLTRPK 22 1 1 Unmodified _AEVLISTVGPEDCVVPFLTRPK_ 0 0 1 A8K492;P56192;A0A024RBA2;F5H2V6;F8VS26;F8W0M7;F8W0S4;F8VZZ9 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.1122 3 809.769921 2426.28793 NaN NaN NaN -0.26557 -0.00021505 NaN NaN NaN NaN 117.32 0.47763 117.32 117.09 117.57 0 0 0 0 2.1166E-06 4 74987 62.362 48.347 1 NaN NaN 0 14126000 0 14126000 882 732 357 364 1380;1381;1382;1383 1383 AEVLISTVGPEDCVVPFLTRPK 22 1 1 Unmodified _AEVLISTVGPEDCVVPFLTRPK_ 0 0 1 A8K492;P56192;A0A024RBA2;F5H2V6;F8VS26;F8W0M7;F8W0S4;F8VZZ9 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.1119 3 809.769921 2426.28793 69484.95 0.9296 0.00075276 -0.022479 -1.8203E-05 0.90712 0.00073456 810.104469926179 816.111605335057 128.91 0.33104 128.91 128.74 129.07 0 71 15 7 0 0 0 0.056759 1 77956 13.13 10.077 1 1.5421 1.3073 0 3036000 1178700 1857200 883 732 357 364 1384 1384 AEVQVLVLDGR 11 0 1 Unmodified _AEVQVLVLDGR_ 0 0 0 Q53H34;P40429;Q5QTS3;B4DNC8;M0QZU1;A0A096LPE0 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8439 2 599.843145 1197.67174 80847.84 0.84417 0.00050637 0.34382 0.00020624 1.188 0.00071261 599.843411717482 604.847454273235 86.941 0.43916 86.941 86.644 87.083 0 111 30 4 0 0 0 0.00033794 1 52279 86.344 69.507 1 0.76229 0.79672 0 13193000 6208300 6985100 884 1558 358 365 1385 1385 AEVQVLVLDGR 11 0 1 Unmodified _AEVQVLVLDGR_ 0 0 0 Q53H34;P40429;Q5QTS3;B4DNC8;M0QZU1;A0A096LPE0 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8438 2 599.843145 1197.67174 79730.9 0.91657 0.0005498 -0.15078 -9.0445E-05 0.76579 0.00045936 599.843061978231 604.847222690417 85.838 0.43184 85.838 85.585 86.017 0 83 30 4 0 0 0 0.0009775 1 52897 71.03 58.454 1 0.82557 0.81521 0 14953000 7038800 7914400 885 1558 358 365 1386 1386 AEVQVLVLDGR 11 0 1 Acetyl (Protein N-term) _(ac)AEVQVLVLDGR_ 1 0 0 Q53H34;P40429;Q5QTS3;B4DNC8;M0QZU1;A0A096LPE0 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.3194 2 620.848427 1239.6823 79704.36 0.91291 0.00056678 0.055645 3.4547E-05 0.96856 0.00060133 621.35047720292 625.852540435015 121.87 0.48777 121.87 121.65 122.14 7.6294E-06 77 32 4 0 0 0 0.010594 1 78902 54.608 46.962 1 0.85476 0.85574 0 8990900 4408600 4582300 886 1558 358 366 1387 1387 AEVVETTQVYTEEETR 16 0 1 Unmodified _AEVVETTQVYTEEETR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.4475 2 942.447085 1882.87962 64713.59 0.47796 0.00045045 -0.13678 -0.00012891 0.34117 0.00032154 942.947639686942 947.451527450266 61.854 0.39262 61.854 61.628 62.021 3.8147E-06 90 31 5 0 0 0 2.1339E-08 1 35440 100.55 87.351 1 1.4511 1.4618 0 7804100 3595700 4208300 887 1754 359 367 1388 1388 AEVVETTQVYTEEETRR 17 0 2 Unmodified _AEVVETTQVYTEEETRR_ 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3409 3 680.667519 2038.98073 72870.29 0.29255 0.00019913 0.22009 0.00014981 0.51264 0.00034894 681.00192247687 687.339515562632 50.897 0.58643 50.897 50.604 51.191 -3.8147E-06 199 53 8 0 0 0 1.0719E-07 1 28111 96.208 86.944 1 1.9246 2.0928 0 49797000 16899000 32898000 888 1754 360 368 1389 1389 AEVVETTQVYTEEETRR 17 0 2 Unmodified _AEVVETTQVYTEEETRR_ 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3357 3 680.667519 2038.98073 73677.94 0.48247 0.0003284 -0.26978 -0.00018363 0.21269 0.00014477 681.001637270095 687.339138730661 49.515 0.59232 49.515 49.136 49.728 0 185 49 7 0 0 0 4.9174E-05 3 27956 50.079 45.641 1 1.8615 2.1421 0 58992000 18716000 40276000 889 1754 360 368 1390;1391;1392 1391 AEVVETTQVYTEEETRR 17 0 2 Unmodified _AEVVETTQVYTEEETRR_ 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.0021 3 680.667519 2038.98073 72257.06 0.43497 0.00029607 0.25047 0.00017049 0.68544 0.00046656 681.002014436231 687.674323979583 59.74 0.56302 59.74 59.539 60.102 0 214 38 8 0 0 0 0.0014425 1 30484 34.498 34.498 1 2.5635 2.1753 0 8356400 2450500 5905800 890 1754 360 368 1393 1393 AEVVQVIR 8 0 1 Unmodified _AEVVQVIR_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.2809 2 457.276909 912.539266 90316.72 0.32941 0.00015063 0.13065 5.9743E-05 0.46006 0.00021037 457.276966277962 462.280982280374 51.354 0.9011 51.354 51.059 51.96 0 392 81 7 0 0 0 0.0021178 3 28342 102.71 43.732 1 0.75737 0.89551 0 266660000 154620000 112040000 891 2037 361 369 1394;1395;1396 1395 AEVVQVIR 8 0 1 Unmodified _AEVVQVIR_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.278 2 457.276909 912.539266 89990.63 0.39661 0.00018136 0.048945 2.2381E-05 0.44555 0.00020374 457.276844622335 462.281019200135 50.013 0.80618 50.013 49.728 50.534 0 418 72 8 0 0 0 0.0065271 2 28124 86.872 41.14 1 0.76922 0.88818 0 246500000 136900000 109600000 892 2037 361 369 1397;1398 1397 AEVVQVIR 8 0 1 Unmodified _AEVVQVIR_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 457.277 2 457.276909 912.539266 90508.88 0.19908 9.1035E-05 0.19621 8.9722E-05 0.39529 0.00018076 457.277061995303 462.280967677363 58.608 0.64182 58.608 58.402 59.044 0 218 48 8 0 0 0 0.010845 2 29808 71.296 32.49 1 0.54291 0.454 0 24226000 15611000 8614100 893 2037 361 369 1399;1400 1399 AEVVQVIR 8 0 1 Unmodified _AEVVQVIR_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 462.2809 2 457.276909 912.539266 89254.3 -0.034409 -1.5734E-05 0.13337 6.0985E-05 0.098958 4.5251E-05 457.276953817045 462.280978806182 58.934 0.59245 58.934 58.737 59.33 0 217 46 7 0 0 0 0.0083247 3 29364 79.116 26.213 1 0.51434 0.44027 0 20705000 13915000 6789900 894 2037 361 369 1401;1402;1403 1402 AEWQVYK 7 1 0 Unmodified _AEWQVYK_ 0 0 0 H7BYN3;Q6LES8;E5KSX8;E5KSU5;Q00059 H7BYN3 H7BYN3 TFAM Transcription factor A, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.2347 2 462.23471 922.454868 89992.3 0.41124 0.00019009 0.25348 0.00011717 0.66471 0.00030725 462.234882017205 466.241731842411 48.419 0.67598 48.419 48.04 48.716 0 189 52 5 0 0 0 0.026656 1 26347 75.311 38.282 1 1.1382 1.1782 0 29259000 14067000 15192000 895 1209 362 370 1404 1404 AEWQVYK 7 1 0 Unmodified _AEWQVYK_ 0 0 0 H7BYN3;Q6LES8;E5KSX8;E5KSU5;Q00059 H7BYN3 H7BYN3 TFAM Transcription factor A, mitochondrial ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 466.2419 2 462.23471 922.454868 NaN NaN NaN -0.038545 -1.7817E-05 NaN NaN NaN NaN 55.615 0.57588 55.615 55.336 55.912 -3.8147E-06 0 0 0 0.045882 1 27870 60.358 29.069 1 NaN NaN 0 2210900 0 2210900 896 1209 362 370 1405 1405 AEWQVYK 7 1 0 Unmodified _AEWQVYK_ 0 0 0 H7BYN3;Q6LES8;E5KSX8;E5KSU5;Q00059 H7BYN3 H7BYN3 TFAM Transcription factor A, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.2419 2 462.23471 922.454868 90667.09 0.14664 6.7782E-05 0.030677 1.418E-05 0.17732 8.1963E-05 462.234833377765 466.241703829377 55.96 0.63663 55.96 55.697 56.333 -3.8147E-06 167 43 5 0 0 0 0.038498 1 27514 60.358 33.396 1 1.7367 1.3898 0 2437100 839220 1597900 897 1209 362 370 1406 1406 AEYEGDGIPTVFVAVAGR 18 0 1 Unmodified _AEYEGDGIPTVFVAVAGR_ 0 0 0 E9PBS1;A0A024RD93;P22234;D6RF62 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 930.9711 2 925.96779 1849.92103 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.81 1 115.81 115.31 116.31 0 0 0 0 1.4017E-09 1 75643 96.756 83.026 1 898 380 363 371 1407 1407 AEYEGDGIPTVFVAVAGR 18 0 1 Unmodified _AEYEGDGIPTVFVAVAGR_ 0 0 0 E9PBS1;A0A024RD93;P22234;D6RF62 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 931.4734 2 925.96779 1849.92103 63796 1.0119 0.00093697 -1.5667 -0.0014507 -0.55477 -0.0005137 926.466815047551 931.472255643415 128.03 0.40179 128.03 127.78 128.18 0 79 15 8 0 0 0 7.2719E-05 1 77234 51.135 51.135 1 2.2049 1.8433 0 3538900 990040 2548900 899 380 363 371 1408 1408 AEYEGDGIPTVFVAVAGR 18 0 1 Unmodified _AEYEGDGIPTVFVAVAGR_ 0 0 0 E9PBS1;A0A024RD93;P22234;D6RF62 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 931.4734 2 925.96779 1849.92103 65144.48 0.64833 0.00060033 -0.69473 -0.00064329 -0.046398 -4.2963E-05 926.467346034649 930.971507244996 127.87 0.40582 127.87 127.6 128.01 -7.6294E-06 75 15 8 0 0 0 0.0025833 1 76182 35.657 35.657 1 1.7927 1.4963 0 4961100 1426100 3535000 900 380 363 371 1409 1409 AEYNLTACK 9 1 0 Unmodified _AEYNLTACK_ 0 0 0 Q2TB10;B7Z4V7 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.2587 2 535.252774 1068.491 85080.16 0.4655 0.00024916 -0.063784 -3.414E-05 0.40172 0.00021502 535.253069044071 539.259764455336 38.367 0.5803 38.367 38.073 38.653 0 144 41 5 0 0 0 0.049868 1 17283 38.086 21.884 1 1.6279 1.3278 0 2651800 1054600 1597200 901 1777 364 372 1410 1410 AEYNLTACK 9 1 0 Unmodified _AEYNLTACK_ 0 0 0 Q2TB10;B7Z4V7 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.2602 2 535.252774 1068.491 83728.94 0.28971 0.00015507 0.057429 3.0739E-05 0.34714 0.00018581 535.253056966191 539.259839872127 38.471 0.61019 38.471 38.131 38.741 0 149 46 5 0 0 0 0.0049382 1 16970 67.993 38.616 1 1.7413 1.378 0 2328900 846360 1482500 902 1777 364 372 1411 1411 AFAETHIK 8 1 0 Unmodified _AFAETHIK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.7548 2 458.747985 915.481417 NaN NaN NaN 0.32522 0.00014919 NaN NaN NaN NaN 23.355 0.45749 23.355 23.164 23.622 0 0 0 0 0.0070183 1 9222 83.753 69.34 1 NaN NaN 0 30841000 0 30841000 903 1207 365 373 1412 1412 AFAETHIK 8 1 0 Unmodified _AFAETHIK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.7553 2 458.747985 915.481417 90131.91 -0.24156 -0.00011081 0.64633 0.0002965 0.40478 0.00018569 458.74821440035 462.755328580127 22.948 0.5052 22.948 22.674 23.179 1.9073E-06 84 21 7 0 0 0 0.0092348 2 8830 75.189 64.213 1 2.4587 2.72 0 45312000 13640000 31672000 904 1207 365 373 1413;1414 1413 AFAHITGGGLLENIPR 16 0 1 Unmodified _AFAHITGGGLLENIPR_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.3104 3 555.973889 1664.89984 NaN NaN NaN 0.80514 0.00044764 NaN NaN NaN NaN 97.509 0.99349 97.509 97.157 98.15 7.6294E-06 0 0 0 0.011124 1 59401 37.555 32.754 1 NaN NaN 0 27710000 0 27710000 905 1507 366 374 1415 1415 AFAHITGGGLLENIPR 16 0 1 Unmodified _AFAHITGGGLLENIPR_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.3094 3 555.973889 1664.89984 81327.51 0.65685 0.00036519 -0.17259 -9.5956E-05 0.48426 0.00026924 556.308178521194 559.309956194123 96.02 0.84679 96.02 95.771 96.618 -7.6294E-06 265 73 6 0 0 0 0.0013928 1 59803 36.345 36.345 1 2.5995 2.9981 0 54941000 19427000 35514000 906 1507 366 374 1416 1416 AFAHITGGGLLENIPR 16 0 1 Unmodified _AFAHITGGGLLENIPR_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.6444 3 555.973889 1664.89984 82106.78 0.56181 0.00031235 -0.11053 -6.1449E-05 0.45128 0.0002509 555.973825284823 559.309815464871 109.5 0.40094 109.5 109.33 109.73 0 91 18 6 0 0 0 0.0078762 2 63132 25.957 25.957 1 1.3108 1.1195 0 5741700 2390300 3351400 907 1507 366 374 1417;1418 1418 AFALNDLDDYEK 12 1 0 Unmodified _AFALNDLDDYEK_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.3375 2 707.330264 1412.64598 NaN NaN NaN 1.2172 0.00086098 NaN NaN NaN NaN 93.362 0.65757 93.362 93.112 93.77 7.6294E-06 0 0 0 0.001473 1 56666 77.662 69.737 1 NaN NaN 0 11360000 0 11360000 908 161 367 375 1419 1419 AFALNDLDDYEK 12 1 0 Unmodified _AFALNDLDDYEK_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3394 2 707.330264 1412.64598 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.863 1 92.863 92.363 93.363 7.6294E-06 0 0 0 0.0074695 1 57585 60.434 41.994 1 909 161 367 375 1420 1420 AFAMIIDK 8 1 0 Oxidation (M) _AFAM(ox)IIDK_ AFAM(1)IIDK AFAM(64.26)IIDK 0 1 0 Q53SS8;Q15365;H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;H3BND9;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7537 2 462.746596 923.478639 89698.94 0.5417 0.00025067 -0.70468 -0.00032609 -0.16299 -7.5421E-05 462.745903518791 466.753555955283 58.542 0.90967 58.542 58.093 59.003 0 222 78 4 0 0 0 0.0067309 1 33957 64.265 26.706 1 3.2501 3.6137 0 50691000 13724000 36966000 910 1263;1760;1759 368 376 1421 1421 967 AFAVGVQQVLLK 12 1 0 Unmodified _AFAVGVQQVLLK_ 0 0 0 O95373 O95373 O95373 IPO7 Importin-7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.3978 2 636.887355 1271.76016 NaN NaN NaN 0.41438 0.00026391 NaN NaN NaN NaN 105.24 0.56203 105.24 104.93 105.49 -7.6294E-06 0 0 0 5.4398E-05 1 65035 93.551 87.77 1 NaN NaN 0 8882000 0 8882000 911 1424 369 377 1422 1422 AFAVGVQQVLLK 12 1 0 Unmodified _AFAVGVQQVLLK_ 0 0 0 O95373 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.895 2 636.887355 1271.76016 77940.3 0.75716 0.00048223 0.15428 9.8261E-05 0.91145 0.00058049 636.887239576192 640.89456783078 104.41 0.79011 104.41 103.97 104.76 0 234 63 5 0 0 0 3.3169E-06 2 66087 111.17 111.17 1 1.6258 1.6382 0 16172000 5064400 11107000 912 1424 369 377 1423;1424 1424 AFAVGVQQVLLK 12 1 0 Unmodified _AFAVGVQQVLLK_ 0 0 0 O95373 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.895 2 636.887355 1271.76016 78152.66 0.39216 0.00024976 0.45617 0.00029053 0.84833 0.00054029 636.887366757528 640.894710234143 116.96 0.43709 116.96 116.69 117.13 0 66 16 6 0 0 0 0.0031688 1 68796 56.729 56.729 1 1.1083 0.87858 0 4246100 2155900 2090200 913 1424 369 377 1425 1425 AFAVGVQQVLLK 12 1 0 Unmodified _AFAVGVQQVLLK_ 0 0 0 O95373 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.895 2 636.887355 1271.76016 78644.8 0.76062 0.00048443 0.16996 0.00010825 0.93058 0.00059267 636.887222647882 640.89447941674 116.7 0.38499 116.7 116.51 116.89 0 74 17 6 0 0 0 0.00053171 2 67706 69.598 69.598 1 0.94062 0.74422 0 3184400 1673800 1510600 914 1424 369 377 1426;1427 1427 AFAVQSAVR 9 0 1 Unmodified _AFAVQSAVR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.7718 2 474.766709 947.518865 88357.52 0.19352 9.1878E-05 0.065178 3.0944E-05 0.2587 0.00012282 474.766611508261 479.770848426981 46.179 0.94678 46.179 45.8 46.746 0 331 83 6 0 0 0 0.0020622 2 24809 77.282 68.953 1 0.93308 1.0426 0 86827000 43362000 43464000 915 1742 370 378 1428;1429 1428 AFAVQSAVR 9 0 1 Unmodified _AFAVQSAVR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.7664 2 474.766709 947.518865 88301.61 0.066458 3.1552E-05 0.0070373 3.3411E-06 0.073495 3.4893E-05 474.766601064455 479.770800912318 45.25 0.79216 45.25 44.867 45.659 0 283 69 6 0 0 0 7.1866E-08 2 24715 142.64 127.21 1 0.92335 1.05 0 119740000 67351000 52384000 916 1742 370 378 1430;1431 1431 AFAVQSAVR 9 0 1 Unmodified _AFAVQSAVR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 479.7711 2 474.766709 947.518865 89232.41 0.17134 8.1347E-05 -0.039189 -1.8606E-05 0.13215 6.2742E-05 474.766607542095 479.770774873286 53.288 0.70177 53.288 52.988 53.69 0 203 50 7 0 0 0 0.0020622 2 25775 77.282 70.828 1 1.4274 1.1569 0 11888000 5023100 6865000 917 1742 370 378 1432;1433 1432 AFAYTWFNLQAR 12 0 1 Unmodified _AFAYTWFNLQAR_ 0 0 0 Q6FI30;B7Z4T6;P08651;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857 Q6FI30;B1AKN6 Q6FI30 NFIC;NFIA Nuclear factor 1;Nuclear factor 1 C-type;Nuclear factor 1 A-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3749 2 744.375143 1486.73573 70897.21 0.81223 0.0006046 -0.42409 -0.00031568 0.38814 0.00028892 744.374411528598 749.378818416419 115.1 0.64665 115.1 114.79 115.44 0 151 39 5 0 0 0 9.0777E-05 2 73205 96.331 96.331 1 0.2907 0.30432 0 12716000 9419000 3296500 918 1091;816 371 379 1434;1435 1435 AFAYTWFNLQAR 12 0 1 Unmodified _AFAYTWFNLQAR_ 0 0 0 Q6FI30;B7Z4T6;P08651;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857 Q6FI30;B1AKN6 Q6FI30 NFIC;NFIA Nuclear factor 1;Nuclear factor 1 C-type;Nuclear factor 1 A-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.3749 2 744.375143 1486.73573 71250.99 0.72605 0.00054045 -0.45097 -0.00033569 0.27508 0.00020476 744.374399204669 749.378877770648 114.57 0.68871 114.57 114.23 114.92 0 170 43 6 0 0 0 0.00022689 2 74561 84.213 84.213 1 0.3989 0.41027 0 21276000 14411000 6865100 919 1091;816 371 379 1436;1437 1437 AFAYTWFNLQAR 12 0 1 Unmodified _AFAYTWFNLQAR_ 0 0 0 Q6FI30;B7Z4T6;P08651;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857 Q6FI30;B1AKN6 Q6FI30 NFIC;NFIA Nuclear factor 1;Nuclear factor 1 C-type;Nuclear factor 1 A-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.3758 2 744.375143 1486.73573 70680.71 1.0643 0.00079221 -0.49329 -0.00036719 0.57097 0.00042502 744.374534189864 749.378882350344 126.33 0.83529 126.33 126 126.83 0 103 30 7 0 0 0 0.00016698 1 76034 91.867 91.867 1 0.57839 0.48904 0 4896600 2836400 2060200 920 1091;816 371 379 1438 1438 AFCGFEDPR 9 0 1 Unmodified _AFCGFEDPR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.7379 2 549.737291 1097.46003 82497.86 0.77878 0.00042812 -0.036389 -2.0005E-05 0.74239 0.00040812 549.737220188063 554.741339644527 56.326 0.57306 56.326 56.038 56.611 0 172 49 5 0 0 0 0.017716 2 31714 52.716 50.933 1 1.6548 1.6805 0 18272000 6613200 11659000 921 1754 372 380 1439;1440 1440 AFCGFEDPR 9 0 1 Unmodified _AFCGFEDPR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.7418 2 549.737291 1097.46003 82082.56 0.34751 0.00019104 0.3763 0.00020687 0.72381 0.00039791 549.737526854939 554.741557522596 55.373 0.54735 55.373 55.059 55.606 0 153 38 6 0 0 0 0.0025185 1 31788 74.127 63.713 1 1.7509 1.8114 0 21711000 8926900 12784000 922 1754 372 380 1441 1441 AFDLFNPNFK 10 1 0 Unmodified _AFDLFNPNFK_ 0 0 0 J3QLR8;Q9Y3D9 J3QLR8 J3QLR8 MRPS23 28S ribosomal protein S23, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.814 2 606.806031 1211.59751 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.85 1 109.85 109.35 110.35 0 0 0 0 0.0003594 1 68854 75.213 50.319 1 923 1335 373 381 1442 1442 AFDLIVDRPVTLVR 14 0 2 Unmodified _AFDLIVDRPVTLVR_ 0 0 1 Q96RX5;H3BV16;H3BPJ9;A8K761;O96000 Q96RX5 Q96RX5 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.6514 3 538.650635 1612.93008 83789.1 0.80089 0.0004314 -0.16096 -8.6699E-05 0.63993 0.0003447 538.650497164682 545.322843283811 107.11 0.58608 107.11 106.86 107.45 0 153 45 5 0 0 0 0.00086612 1 66523 50.562 47.701 1 0.98072 1.091 0 9123900 4517800 4606100 924 767 374 382 1443 1443 AFDLIVDRPVTLVR 14 0 2 Unmodified _AFDLIVDRPVTLVR_ 0 0 1 Q96RX5;H3BV16;H3BPJ9;A8K761;O96000 Q96RX5 Q96RX5 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.9853 3 538.650635 1612.93008 84109.52 0.72658 0.00039137 -0.12073 -6.5033E-05 0.60585 0.00032634 538.98476745035 545.322911230906 106.18 0.56729 106.18 105.89 106.45 0 157 43 6 0 0 0 0.011973 1 67411 32.275 27.727 1 1.0391 1.1286 0 17671000 9115300 8556000 925 767 374 382 1444 1444 AFDPTSTLLATGGCDGAVR 19 0 1 Unmodified _AFDPTSTLLATGGCDGAVR_ 0 0 0 A0A087WYP7 A0A087WYP7 A0A087WYP7 TBL3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 959.9655 2 954.959639 1907.90473 62070.28 0.38483 0.00036749 0.37179 0.00035504 0.75661 0.00072254 955.462173576537 959.963981776617 113.65 0.50906 113.65 113.44 113.95 -7.6294E-06 100 24 6 0 0 0 0.0047071 1 65284 32.275 32.275 1 1.1146 0.96363 0 4359100 2284200 2074800 926 436 375 383 1445 1445 AFDTQLVER 9 0 1 Unmodified _AFDTQLVER_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.7844 2 539.780013 1077.54547 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.283 1 70.283 69.783 70.783 0 0 0 0 0.012045 1 36133 61.679 29.208 1 927 2002 376 384 1446 1446 AFEDDAIQLVAR 12 0 1 Unmodified _AFEDDAIQLVAR_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.3522 2 674.348791 1346.68303 NaN NaN NaN 0.016498 1.1125E-05 NaN NaN NaN NaN 111.08 0.40176 111.08 110.88 111.28 0 0 0 0 2.6333E-05 1 63322 99.815 88.325 1 NaN NaN 0 4155800 0 4155800 928 1103 377 385 1447 1447 AFEEDQVAGR 10 0 1 Unmodified _AFEEDQVAGR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.2646 2 561.264727 1120.5149 78274.41 0.5113 0.00028697 1.6658 0.00093494 2.1771 0.0012219 561.264458974224 566.26846536441 34.904 1.1283 34.904 34.495 35.624 0 468 96 7 0 0 0 3.5718E-05 2 15469 99.442 76.661 1 0.77458 0.65224 0 27821000 15598000 12223000 929 1389 378 386 1448;1449 1449 AFEEDQVAGR 10 0 1 Unmodified _AFEEDQVAGR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.269 2 561.264727 1120.5149 78284.6 0.70961 0.00039828 1.8068 0.0010141 2.5164 0.0014124 561.264358084922 566.268460954208 34.969 0.91862 34.969 34.631 35.55 0 389 77 9 0 0 0 8.9167E-06 2 15025 106.04 85.522 1 0.78343 0.68214 0 24914000 13636000 11278000 930 1389 378 386 1450;1451 1450 AFEVSENGNLVVSGK 15 1 0 Unmodified _AFEVSENGNLVVSGK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.9028 2 775.39647 1548.77839 68949.95 0.56088 0.00043491 -0.76355 -0.00059206 -0.20267 -0.00015715 775.396809327667 779.403625488614 76.797 0.5289 76.797 76.553 77.082 -7.6294E-06 185 45 6 0 0 0 0.00033588 2 45246 78.903 78.903 1 1.378 1.4203 0 14588000 6200500 8387800 931 587 379 387 1452;1453 1453 AFEVSENGNLVVSGK 15 1 0 Unmodified _AFEVSENGNLVVSGK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.4036 2 775.39647 1548.77839 68417.73 0.51832 0.0004019 -1.2002 -0.00093062 -0.68186 -0.00052871 775.397118646606 779.403509684742 75.856 0.83032 75.856 75.569 76.4 0 213 74 5 0 0 0 1.7274E-05 2 45732 110.08 110.08 1 1.2514 1.279 0 17331000 6459600 10872000 932 587 379 387 1454;1455 1455 AFGIPIR 7 0 1 Unmodified _AFGIPIR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 387.2367 2 387.237056 772.459559 96708.52 0.48931 0.00018948 -0.30768 -0.00011914 0.18163 7.0335E-05 387.23683594659 392.240963518436 80.678 0.93734 80.678 80.22 81.157 0 352 79 6 0 0 0 0.014977 2 47834 99.511 34.948 1 1.3148 1.4679 0 85741000 35171000 50570000 933 25 380 388 1456;1457 1457 AFGIPIR 7 0 1 Unmodified _AFGIPIR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 387.2371 2 387.237056 772.459559 96058.27 0.41801 0.00016187 -0.22034 -8.5324E-05 0.19767 7.6545E-05 387.236843456753 392.241014259431 79.364 0.84546 79.364 78.993 79.838 0 306 70 6 0 0 0 0.026837 2 48036 80.377 34.026 1 1.2791 1.4612 0 90396000 38920000 51477000 934 25 380 388 1458;1459 1458 AFGIPIR 7 0 1 Unmodified _AFGIPIR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 387.237 2 387.237056 772.459559 95960.81 0.33636 0.00013025 -0.17444 -6.7549E-05 0.16192 6.2701E-05 387.236897903935 392.240997674735 91.722 0.84985 91.722 91.417 92.266 -7.6294E-06 217 57 6 0 0 0 0.034447 2 50924 62.338 27.497 1 1.2682 1.076 0 9252200 3977500 5274700 935 25 380 388 1460;1461 1461 AFGIPIR 7 0 1 Unmodified _AFGIPIR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 387.2367 2 387.237056 772.459559 95884.7 0.054092 2.0946E-05 -0.11679 -4.5224E-05 -0.062695 -2.4278E-05 387.236906723039 392.241032888276 91.486 0.71988 91.486 91.217 91.937 0 222 48 6 0 0 0 0.056179 1 49971 52.231 9.4579 1 1.4258 1.1798 0 8000900 3451400 4549500 936 25 380 388 1462 1462 AFGIYLNK 8 1 0 Unmodified _AFGIYLNK_ 0 0 0 Q8NG31;H0YCZ2;H0YEY7 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.2612 2 463.260728 924.506903 94348.98 0.087852 4.0698E-05 0.029042 1.3454E-05 0.11689 5.4152E-05 463.260764555328 467.267764861665 77.191 0.63143 77.191 76.917 77.548 0 157 54 4 0 0 0 0.026086 2 45596 54.787 31.857 1 0.94897 0.94986 0 7681900 4109200 3572600 937 1928 381 389 1463;1464 1463 AFGYYGPLR 9 0 1 Unmodified _AFGYYGPLR_ 0 0 0 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.7712 2 522.269084 1042.52362 84138.61 0.25558 0.00013348 -0.036685 -1.916E-05 0.21889 0.00011432 522.268981252699 527.273111194287 77.128 1.2448 77.128 76.655 77.9 0 632 104 9 0 0 0 0.0013259 3 45428 86.866 77.921 1 1.356 1.5789 0 187610000 81798000 105810000 938 841 382 390 1465;1466;1467 1466 AFGYYGPLR 9 0 1 Unmodified _AFGYYGPLR_ 0 0 0 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.2691 2 522.269084 1042.52362 83770.16 0.17373 9.0732E-05 0.16717 8.7309E-05 0.3409 0.00017804 522.269185695713 527.27320509443 75.909 1.4669 75.909 75.293 76.76 0 617 125 9 0 0 0 1.4681E-05 3 45729 122.79 113.58 1 1.3198 1.5329 0 353300000 151390000 201900000 939 841 382 390 1468;1469;1470 1469 AFGYYGPLR 9 0 1 Unmodified _AFGYYGPLR_ 0 0 0 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.2693 2 522.269084 1042.52362 83041.36 0.28059 0.00014655 -0.067074 -3.5031E-05 0.21352 0.00011152 522.268880669559 527.273139763449 87.808 1.4334 87.808 87.317 88.75 0 386 87 7 0 0 0 0.033971 1 48143 44.447 40.701 1 0.61255 0.50143 0 16380000 10103000 6277200 940 841 382 390 1471 1471 AFGYYGPLR 9 0 1 Unmodified _AFGYYGPLR_ 0 0 0 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.2689 2 522.269084 1042.52362 83312.54 0.29479 0.00015396 -0.069092 -3.6085E-05 0.2257 0.00011788 522.268907117229 527.273109826006 87.88 1.2345 87.88 87.283 88.518 0 366 70 8 0 0 0 0.0010518 2 47403 90.661 80.194 1 0.59864 0.49863 0 15754000 9924800 5829500 941 841 382 390 1472;1473 1473 AFHLFCLR 8 0 1 Unmodified _AFHLFCLR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 358.5243 3 355.188378 1062.54331 NaN NaN NaN -0.65978 -0.00023435 NaN NaN NaN NaN 88.348 0.26706 88.348 88.11 88.378 0 0 0 0 0.026264 1 53220 40.268 32.343 1 NaN NaN 0 2559200 0 2559200 942 2103 383 391 1474 1474 AFHNEAQVNPER 12 0 1 Unmodified _AFHNEAQVNPER_ 0 0 0 P17987;F5H282;E7EQR6 P17987 P17987 TCP1 T-complex protein 1 subunit alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.8448 2 706.339289 1410.66403 NaN NaN NaN -0.061527 -4.3459E-05 NaN NaN NaN NaN 22.136 0.20756 22.136 22.04 22.248 0 0 0 0 4.9625E-05 1 8313 94.616 80.409 1 NaN NaN 0 3630200 0 3630200 943 1496 384 392 1475 1475 AFHNEAQVNPER 12 0 1 Unmodified _AFHNEAQVNPER_ 0 0 0 P17987;F5H282;E7EQR6 P17987 P17987 TCP1 T-complex protein 1 subunit alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.3388 2 706.339289 1410.66403 NaN NaN NaN -0.65586 -0.00046326 NaN NaN NaN NaN 21.815 0.14527 21.815 21.744 21.89 0 0 0 0 4.5768E-05 1 7894 95.477 82.901 1 NaN NaN 0 2908200 2908200 0 944 1496 384 392 1476 1476 AFIGFEGVK 9 1 0 Unmodified _AFIGFEGVK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.2651 2 484.26601 966.517468 86628.33 0.62198 0.00030121 -0.53768 -0.00026038 0.084302 4.0825E-05 484.265690274063 488.272710118648 84.318 1.156 84.318 83.593 84.749 0 339 94 6 0 0 0 0.04115 1 50262 41.575 11.39 1 0.79715 0.89755 0 117440000 62798000 54644000 945 1486 385 393 1477 1477 AFIGFEGVK 9 1 0 Unmodified _AFIGFEGVK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.2653 2 484.26601 966.517468 87594.8 0.29956 0.00014507 0.062861 3.0442E-05 0.36242 0.00017551 484.265950009642 488.273048704983 83.097 1.096 83.097 82.669 83.765 0 350 84 6 0 0 0 0.016329 1 50691 53.968 23.783 1 0.75082 0.83907 0 88137000 49433000 38704000 946 1486 385 393 1478 1478 AFIPAIDSFGFETDLR 16 0 1 Unmodified _AFIPAIDSFGFETDLR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.9555 2 899.954152 1797.89375 64152.6 0.99595 0.00089631 0.10453 9.4075E-05 1.1005 0.00099039 900.456445171279 904.95848037903 128.63 0.34665 128.63 128.5 128.85 0 147 19 11 0 0 0 4.4366E-12 2 83874 138.94 138.94 1 0.9691 1.0806 0 84188000 43516000 40672000 947 794 386 394 1479;1480 1480 AFIPAIDSFGFETDLR 16 0 1 Unmodified _AFIPAIDSFGFETDLR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.9548 2 899.954152 1797.89375 64169.69 0.75403 0.00067859 0.97528 0.00087771 1.7293 0.0015563 900.458965822413 904.95888854909 128.28 0.44185 128.28 128.14 128.58 -1.5259E-05 167 31 11 0 0 0 4.4366E-12 2 85700 140.14 133.17 1 0.96028 1.0937 0 106540000 54434000 52108000 948 794 386 394 1481;1482 1482 AFITNIPFDVK 11 1 0 Unmodified _AFITNIPFDVK_ 0 0 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.8506 2 632.850438 1263.68632 76507.75 0.73574 0.00046561 0.22335 0.00014134 0.95909 0.00060696 632.850531157688 636.857573953921 113.09 0.93736 113.09 112.7 113.64 0 435 69 10 0 0 0 0.00043233 2 71326 78.939 67.091 1 1.35 1.5244 0 137800000 57017000 80785000 949 1599 387 395 1483;1484 1484 AFITNIPFDVK 11 1 0 Unmodified _AFITNIPFDVK_ 0 0 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.851 2 632.850438 1263.68632 76350.47 0.70362 0.00044529 0.10079 6.3782E-05 0.80441 0.00050907 632.850399822661 636.857531036127 112.43 0.79698 112.43 112.1 112.9 0 395 57 10 0 0 0 0.00034479 2 72573 85.807 66.021 1 1.4075 1.6137 0 165990000 66627000 99359000 950 1599 387 395 1485;1486 1486 AFITNIPFDVK 11 1 0 Unmodified _AFITNIPFDVK_ 0 0 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.8512 2 632.850438 1263.68632 76900.88 0.70141 0.00044389 0.095052 6.0154E-05 0.79646 0.00050404 632.850427740743 636.8575208017 124.28 0.75304 124.28 123.97 124.72 0 198 31 11 0 0 0 0.00045025 2 74320 77.533 57.747 1 0.97034 0.79084 0 31909000 15753000 16156000 951 1599 387 395 1487;1488 1488 AFITNIPFDVK 11 1 0 Unmodified _AFITNIPFDVK_ 0 0 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.8509 2 632.850438 1263.68632 76694.42 0.74709 0.0004728 0.069828 4.4191E-05 0.81692 0.00051699 632.850404201711 636.857466018353 124.13 0.78883 124.13 123.78 124.57 0 181 31 9 0 0 0 6.9031E-08 2 73267 114.4 94.614 1 0.97367 0.80373 0 30911000 16061000 14850000 952 1599 387 395 1489;1490 1490 AFIVTDEDIR 10 0 1 Unmodified _AFIVTDEDIR_ 0 0 0 Q9UBB5;O60535;Q69YZ5 Q9UBB5 Q9UBB5 MBD2;NY-CO-41;DKFZp586O0821 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.8067 2 589.806228 1177.5979 78670.84 0.72866 0.00042977 1.6577 0.00097769 2.3863 0.0014075 589.806149026084 594.810306815854 78.835 0.76833 78.835 78.472 79.241 7.6294E-06 288 70 6 0 0 0 1.4776E-05 2 46637 101.64 86.262 1 0.76809 0.80148 0 38588000 19648000 18940000 953 2096 388 396 1491;1492 1491 AFIVTDEDIR 10 0 1 Unmodified _AFIVTDEDIR_ 0 0 0 Q9UBB5;O60535;Q69YZ5 Q9UBB5 Q9UBB5 MBD2;NY-CO-41;DKFZp586O0821 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.8058 2 589.806228 1177.5979 76975.66 0.77317 0.00045602 0.72901 0.00042997 1.5022 0.00088599 589.806119166191 594.809989740245 77.779 0.61577 77.779 77.541 78.157 0 194 53 5 0 0 0 1.4776E-05 1 47020 101.64 88.377 1 0.86495 0.94674 0 39716000 16701000 23014000 954 2096 388 396 1493 1493 AFIVTDEDIR 10 0 1 Unmodified _AFIVTDEDIR_ 0 0 0 Q9UBB5;O60535;Q69YZ5 Q9UBB5 Q9UBB5 MBD2;NY-CO-41;DKFZp586O0821 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.8062 2 589.806228 1177.5979 77763.38 0.42897 0.00025301 1.5364 0.00090616 1.9653 0.0011592 589.806058689661 594.809897673192 89.995 0.92545 89.995 89.601 90.526 0 301 63 8 0 0 0 0.0073232 3 49761 57.59 50.369 1 1.33 1.1407 0 8489300 3675800 4813500 955 2096 388 396 1494;1495;1496 1495 AFIVTDEDIR 10 0 1 Unmodified _AFIVTDEDIR_ 0 0 0 Q9UBB5;O60535;Q69YZ5 Q9UBB5 Q9UBB5 MBD2;NY-CO-41;DKFZp586O0821 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.8058 2 589.806228 1177.5979 78103.88 0.36849 0.00021734 1.593 0.00093958 1.9615 0.0011569 589.806005705694 594.810239369018 89.926 1.0342 89.926 89.415 90.449 0 286 68 7 0 0 0 0.0081748 2 48953 58.433 47.037 1 1.265 1.0523 0 7338700 2789900 4548800 956 2096 388 396 1497;1498 1498 AFIVTDEDIRK 11 1 1 Unmodified _AFIVTDEDIRK_ 0 0 1 Q9UBB5;O60535;Q69YZ5 Q9UBB5 Q9UBB5 MBD2;NY-CO-41;DKFZp586O0821 Methyl-CpG-binding domain protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.8658 2 653.853709 1305.69287 NaN NaN NaN 0.3755 0.00024552 NaN NaN NaN NaN 57.212 0.32944 57.212 57.077 57.406 0 0 0 0 0.013049 1 32320 55.567 37.255 1 NaN NaN 0 5350500 0 5350500 957 2096 389 397 1499 1499 AFIVTDEDIRK 11 1 1 Unmodified _AFIVTDEDIRK_ 0 0 1 Q9UBB5;O60535;Q69YZ5 Q9UBB5 Q9UBB5 MBD2;NY-CO-41;DKFZp586O0821 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.2454 3 436.238232 1305.69287 91932.33 0.0077167 3.3663E-06 -0.18204 -7.9413E-05 -0.17432 -7.6046E-05 436.238069317228 442.245790751247 56.201 0.53696 56.201 55.888 56.425 0 164 42 6 0 0 0 0.015522 2 32294 33.057 22.509 1 0.81161 0.91057 0 12699000 5732600 6966400 958 2096 389 397 1500;1501 1501 AFIVTDEDIRK 11 1 1 Unmodified _AFIVTDEDIRK_ 0 0 1 Q9UBB5;O60535;Q69YZ5 Q9UBB5 Q9UBB5 MBD2;NY-CO-41;DKFZp586O0821 Methyl-CpG-binding domain protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.8632 2 653.853709 1305.69287 NaN NaN NaN -0.62403 -0.00040803 NaN NaN NaN NaN 56.156 0.42817 56.156 55.888 56.316 0 0 0 0 0.012247 1 32192 56.563 45.734 1 NaN NaN 0 4342200 0 4342200 959 2096 389 397 1502 1502 AFIVWLANGDTLR 13 0 1 Unmodified _AFIVWLANGDTLR_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59;A0A0S2Z5C1;A0A087WXC6 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.4042 2 738.403901 1474.79325 NaN NaN NaN -0.23743 -0.00017532 NaN NaN NaN NaN 119.62 0.43968 119.62 119.41 119.85 0 0 0 0 0.0058587 1 76902 70.1 34.156 1 NaN NaN 0 2680400 2680400 0 960 582 390 398 1503 1503 AFIVWLANGDTLR 13 0 1 Unmodified _AFIVWLANGDTLR_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59;A0A0S2Z5C1;A0A087WXC6 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.403 2 738.403901 1474.79325 77193.99 0.72887 0.0005382 0.56529 0.00041742 1.2942 0.00095561 738.403920128478 743.40778003697 119.01 0.40388 119.01 118.84 119.24 0 56 26 5 0 0 0 0.00014894 1 78451 84.17 84.17 1 0.74777 0.76451 0 5117700 3195500 1922100 961 582 390 398 1504 1504 AFLDFHALPYQVVEVNPVR 19 0 1 Unmodified _AFLDFHALPYQVVEVNPVR_ 0 0 0 Q9H7Z7 Q9H7Z7 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.4012 3 738.728384 2213.16332 NaN NaN NaN -0.053562 -3.9568E-05 NaN NaN NaN NaN 123.4 0.63948 123.4 123.05 123.69 0 0 0 0 0.0082998 1 79946 33.667 29.314 1 NaN NaN 0 3235800 0 3235800 962 2041 391 399 1505 1505 AFLDFHALPYQVVEVNPVR 19 0 1 Unmodified _AFLDFHALPYQVVEVNPVR_ 0 0 0 Q9H7Z7 Q9H7Z7 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.7341 3 738.728384 2213.16332 73980.67 1.2653 0.00093469 -0.75877 -0.00056052 0.50651 0.00037417 739.062353575642 742.064006757782 134.22 0.14244 134.22 134.14 134.28 0 22 6 5 0 0 0 0.04158 1 81893 14.31 11.022 1 1.2605 1.0663 0 2966600 1201400 1765200 963 2041 391 399 1506 1506 AFLGELK 7 1 0 Unmodified _AFLGELK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.2358 2 389.228897 776.44324 97303.72 0.1588 6.1809E-05 0.070988 2.7631E-05 0.22979 8.9439E-05 389.228768359632 393.235910680563 65.436 0.9874 65.436 65.105 66.092 0 354 90 6 0 0 0 0.041494 1 37623 58.981 15.981 1 0.64329 0.70274 0 50920000 29903000 21016000 964 1665 392 400 1507 1507 AFLGELK 7 1 0 Unmodified _AFLGELK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.2286 2 389.228897 776.44324 97238.41 0.22113 8.6069E-05 0.32745 0.00012745 0.54857 0.00021352 389.228799348411 393.235920611922 63.961 1.1021 63.961 63.664 64.766 -3.8147E-06 345 102 8 0 0 0 0.02688 1 37503 74.415 28.045 1 0.71174 0.80267 0 62355000 36478000 25877000 965 1665 392 400 1508 1508 AFLGGLNWAFIGVDEAHR 18 0 1 Unmodified _AFLGGLNWAFIGVDEAHR_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.6761 3 658.33912 1971.99553 NaN NaN NaN -0.12076 -7.95E-05 NaN NaN NaN NaN 123.45 0.20746 123.45 123.38 123.58 0 0 0 0 0.0114 1 81968 32.55 23.731 1 NaN NaN 0 2122400 0 2122400 966 1366 393 401 1509 1509 AFLIEEQK 8 1 0 Unmodified _AFLIEEQK_ 0 0 0 A0A024RDH8;P49207;Q5MK14 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.2682 2 489.26875 976.522947 84782.88 -0.0019224 -9.4056E-07 0.30315 0.00014832 0.30123 0.00014738 489.268929341601 493.276007952851 58.521 1.5695 58.521 57.747 59.316 3.8147E-06 674 127 9 0 0 0 0.00064938 2 33096 129.4 97.332 1 0.87631 1.0355 0 390180000 211450000 178730000 967 386 394 402 1510;1511 1511 AFLIEEQK 8 1 0 Unmodified _AFLIEEQK_ 0 0 0 A0A024RDH8;P49207;Q5MK14 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.9667 1 977.530224 976.522947 62845.79 0.20843 0.00020374 0.23659 0.00023128 0.44502 0.00043502 977.530384853403 985.544690668997 57.437 0.53011 57.437 57.155 57.685 0 154 42 4 0 0 0 0.01634 1 33060 81.297 31.938 1 0.80431 0.86924 0 21928000 11832000 10095000 968 386 394 402 1512 1512 AFLIEEQK 8 1 0 Unmodified _AFLIEEQK_ 0 0 0 A0A024RDH8;P49207;Q5MK14 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.2758 2 489.26875 976.522947 83885.98 0.29005 0.00014191 -0.028762 -1.4073E-05 0.26129 0.00012784 489.268774947475 493.275724066634 57.437 1.0844 57.437 56.905 57.99 0 563 85 9 0 0 0 0.00064938 2 33127 129.4 100.09 1 0.83871 0.9887 0 659820000 365420000 294400000 969 386 394 402 1513;1514 1513 AFLIEEQK 8 1 0 Unmodified _AFLIEEQK_ 0 0 0 A0A024RDH8;P49207;Q5MK14 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.2689 2 489.26875 976.522947 84822.01 0.27311 0.00013363 0.071284 3.4877E-05 0.3444 0.0001685 489.268745018569 493.275790280109 66.875 1.7798 66.875 66.189 67.969 0 605 116 9 0 0 0 0.0010264 2 34698 114.6 76.364 1 1.0053 0.82778 0 40273000 20123000 20150000 970 386 394 402 1515;1516 1516 AFLIEEQK 8 1 0 Unmodified _AFLIEEQK_ 0 0 0 A0A024RDH8;P49207;Q5MK14 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.2687 2 489.26875 976.522947 84832.23 0.16269 7.9597E-05 0.18803 9.1995E-05 0.35071 0.00017159 489.268762458298 493.275922485568 67.32 1.7392 67.32 66.597 68.336 0 508 113 7 0 0 0 0.0019563 2 34142 104.21 76.102 1 1.0056 0.83257 0 33730000 17049000 16681000 971 386 394 402 1517;1518 1517 AFLLESLLK 9 1 0 Unmodified _AFLLESLLK_ 0 0 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.3256 2 517.318243 1032.62193 87140.8 0.40253 0.00020824 -0.20297 -0.000105 0.19956 0.00010324 517.318132592034 521.32525073309 122.66 0.41611 122.66 122.48 122.9 0 82 29 4 0 0 0 0.017716 2 79407 52.716 38.075 1 0.70953 0.72603 0 4338600 2781300 1557200 972 1974 395 403 1519;1520 1519 AFLLESLLK 9 1 0 Unmodified _AFLLESLLK_ 0 0 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.3179 2 517.318243 1032.62193 90263.16 0.68537 0.00035455 -0.3073 -0.00015897 0.37807 0.00019558 517.318053420733 521.325163970927 122.06 0.41036 122.06 121.84 122.25 0 67 28 4 0 0 0 0.0070864 2 80853 62.546 47.764 1 0.77461 0.82557 0 3993400 2502900 1490400 973 1974 395 403 1521;1522 1522 AFLNAIMR 8 0 1 Oxidation (M) _AFLNAIM(ox)R_ AFLNAIM(1)R AFLNAIM(103.29)R 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.2581 2 476.257662 950.500772 86193.55 -0.10049 -4.7859E-05 0.20168 9.6053E-05 0.10119 4.8195E-05 476.257841018303 481.26140950219 66.557 0.66647 66.557 66.218 66.884 0 216 52 6 0 0 0 0.00099607 2 38287 103.29 65.64 1 0.91487 0.97772 0 44847000 23496000 21351000 974 515 396 404 1523;1524 1523 364 AFLNAIMR 8 0 1 Oxidation (M) _AFLNAIM(ox)R_ AFLNAIM(1)R AFLNAIM(71.14)R 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.2589 2 476.257662 950.500772 NaN NaN NaN 0.4098 0.00019517 NaN NaN NaN NaN 65.276 0.72412 65.276 64.872 65.596 0 0 0 0 0.0043578 1 38319 71.141 52.762 1 NaN NaN 0 23191000 23191000 0 975 515 396 404 1525 1525 364 AFLNAIMR 8 0 1 Oxidation (M) _AFLNAIM(ox)R_ AFLNAIM(1)R AFLNAIM(43)R 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 476.2571 2 476.257662 950.500772 88753.03 0.18038 8.5905E-05 -0.87586 -0.00041713 -0.69548 -0.00033123 476.257537309877 481.260973652807 76.01 0.76446 76.01 75.601 76.365 7.6294E-06 173 53 4 0 0 0 0.025217 2 40431 43 38.318 1 1.2199 1.058 0 2461800 1029800 1432000 976 515 396 404 1526;1527 1527 364 AFLNAIMR 8 0 1 Oxidation (M) _AFLNAIM(ox)R_ AFLNAIM(1)R AFLNAIM(41.5)R 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.2608 2 476.257662 950.500772 88680.66 0.18368 8.7477E-05 -0.9487 -0.00045182 -0.76502 -0.00036435 476.257733129879 481.261038688647 76.254 0.7466 76.254 75.867 76.614 7.6294E-06 147 50 4 0 0 0 0.027208 1 39788 41.502 36.907 1 1.1344 1.0233 0 2072600 680890 1391700 977 515 396 404 1528 1528 364 AFLQENTHVR 10 0 1 Unmodified _AFLQENTHVR_ 0 0 0 W0HJ78;B0QYD3;Q9UH17;B7ZLZ1;A0A0K0MJ49;P31941;A0A0K0MJ25 W0HJ78 W0HJ78 APOBEC3B;APOBEC3A DNA dC->dU-editing enzyme APOBEC-3B;DNA dC->dU-editing enzyme APOBEC-3A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8228 2 607.817461 1213.62037 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.936 1 32.936 32.436 33.436 0 0 0 0 6.7576E-05 1 16389 83.265 41.156 1 978 807 397 405 1529 1529 AFLQGGQEATDIALLLR 17 0 1 Unmodified _AFLQGGQEATDIALLLR_ 0 0 0 Q6AWB3;Q6AWB1;E7EX90;Q6MZZ3;Q14203;O95654 Q6AWB3 Q6AWB3 DKFZp686E191;DKFZp686E0752;DCTN1;DKFZp686I0746 Dynactin subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 913.5079 2 908.5018 1814.98905 NaN NaN NaN 0.72104 0.00065507 NaN NaN NaN NaN 125.12 0.20464 125.12 125.01 125.21 -7.6294E-06 0 0 0 7.4513E-13 2 81313 107.09 87.43 1 NaN NaN 0 1880900 0 1880900 979 1226 398 406 1530;1531 1530 AFLQGGQEATDIALLLR 17 0 1 Unmodified _AFLQGGQEATDIALLLR_ 0 0 0 Q6AWB3;Q6AWB1;E7EX90;Q6MZZ3;Q14203;O95654 Q6AWB3 Q6AWB3 DKFZp686E191;DKFZp686E0752;DCTN1;DKFZp686I0746 Dynactin subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.0091 2 908.5018 1814.98905 70085.02 0.96342 0.00087527 0.064906 5.8967E-05 1.0283 0.00093424 909.003239247058 913.505786997165 124.73 0.28362 124.73 124.62 124.91 0 44 18 4 0 0 0 0.00012763 1 82979 57.175 57.175 1 2.0094 2.1067 0 4192800 1266500 2926200 980 1226 398 406 1532 1532 AFLTLAEDILR 11 0 1 Unmodified _AFLTLAEDILR_ 0 0 0 P61026;Q53T70 P61026 P61026 RAB10 Ras-related protein Rab-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.3649 2 631.36117 1260.70779 77090.23 0.86829 0.0005482 -0.084102 -5.3099E-05 0.78418 0.0004951 631.360775947607 636.365239845445 126.32 0.59068 126.32 126.02 126.62 0 227 45 7 0 0 0 1.8459E-05 2 82058 105.52 95.29 1 1.9835 2.0763 0 12734000 3920700 8813300 981 1627 399 407 1533;1534 1533 AFLTLAEDILR 11 0 1 Unmodified _AFLTLAEDILR_ 0 0 0 P61026;Q53T70 P61026 P61026 RAB10 Ras-related protein Rab-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3616 2 631.36117 1260.70779 76208.82 0.89794 0.00056692 -0.1054 -6.6544E-05 0.79254 0.00050038 631.360976865852 636.365226802328 125.81 0.61204 125.81 125.54 126.15 0 185 37 7 0 0 0 3.3284E-08 3 83781 120.12 108.16 1 1.9409 1.9313 0 16365000 5355000 11010000 982 1627 399 407 1535;1536;1537 1536 AFLYEPTTQASGR 13 0 1 Unmodified _AFLYEPTTQASGR_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.8628 2 720.859523 1439.70449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.99 1 76.99 76.49 77.49 0 0 0 0 0.013466 1 41150 51.927 31.025 1 983 898 400 408 1538 1538 AFLYEPTTQASGR 13 0 1 Unmodified _AFLYEPTTQASGR_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.8632 2 720.859523 1439.70449 71929.67 0.64543 0.00046526 0.44389 0.00031998 1.0893 0.00078524 721.364103189258 725.862993037154 77.285 0.58179 77.285 77.074 77.656 7.6294E-06 124 38 7 0 0 0 0.022552 1 40519 44.309 25.529 1 2.2828 1.9327 0 3035400 905770 2129600 984 898 400 408 1539 1539 AFMGPLK 7 1 0 Oxidation (M) _AFM(ox)GPLK_ AFM(1)GPLK AFM(66.99)GPLK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 390.2096 2 390.20965 778.404746 NaN NaN NaN 0.37661 0.00014696 NaN NaN NaN NaN 37.384 0.95035 37.384 36.958 37.908 0 0 0 0 0.010103 1 18986 66.994 46.134 1 NaN NaN 0 231210000 231210000 0 985 1554;936 401 409 1540 1540 762 AFMGPLK 7 1 0 Oxidation (M) _AFM(ox)GPLK_ AFM(1)GPLK AFM(62)GPLK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 390.2096 2 390.20965 778.404746 96567.45 0.57947 0.00022612 -0.014825 -5.7848E-06 0.56465 0.00022033 390.209684373435 394.21664419647 36.427 0.97356 36.427 36.071 37.044 0 270 78 4 0 0 0 0.016924 2 18731 61.997 42.928 1 1.4663 1.7293 0 749070000 298700000 450370000 986 1554;936 401 409 1541;1542 1541 762 AFMGPLK 7 1 0 Oxidation (M) _AFM(ox)GPLK_ AFM(1)GPLK AFM(57.45)GPLK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 390.2096 2 390.20965 778.404746 96684.85 0.14943 5.8309E-05 0.15891 6.2009E-05 0.30834 0.00012032 390.209676064527 394.216753144073 41.713 0.76831 41.713 41.438 42.206 0 199 61 4 0 0 0 0.021714 1 19348 57.453 41.816 1 0.83315 0.66714 0 20808000 11268000 9540300 987 1554;936 401 409 1543 1543 762 AFMGPLK 7 1 0 Unmodified _AFMGPLK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 382.2123 2 382.212192 762.409832 98541.88 0.038462 1.4701E-05 0.072673 2.7776E-05 0.11113 4.2477E-05 382.212092722501 386.219242744953 55.948 0.60907 55.948 55.632 56.241 3.8147E-06 140 49 5 0 0 0 0.040059 1 32003 59.641 43.534 1 0.66414 0.68094 0 9434300 5558800 3875500 988 1554;936 401 410 1544 1544 AFMGTPVQK 9 1 0 Oxidation (M) _AFM(ox)GTPVQK_ AFM(1)GTPVQK AFM(159.04)GTPVQK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.7551 2 497.754953 993.495352 82694.52 0.40154 0.00019987 -0.24942 -0.00012415 0.15211 7.5716E-05 497.754864873518 501.761924580255 25.965 0.94169 25.965 25.613 26.555 0 190 53 11 0 0 0 2.5668E-12 2 11447 159.04 98.078 1 1.9308 2.2916 0 517730000 175130000 342600000 989 1569 402 411 1545;1546 1546 1327 AFMGTPVQK 9 1 0 Oxidation (M) _AFM(ox)GTPVQK_ AFM(1)GTPVQK AFM(178.08)GTPVQK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.7626 2 497.754953 993.495352 76947.82 0.32165 0.0001601 0.23501 0.00011698 0.55666 0.00027708 497.755077534357 501.762120773496 25.64 0.85407 25.64 25.251 26.105 0 212 47 8 0 0 0 3.9392E-25 2 11174 178.08 117.12 1 1.926 2.2694 0 575960000 194290000 381670000 990 1569 402 411 1547;1548 1547 1327 AFMGTPVQK 9 1 0 Oxidation (M) _AFM(ox)GTPVQK_ AFM(1)GTPVQK AFM(121.62)GTPVQK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.7622 2 497.754953 993.495352 82507.13 0.18703 9.3097E-05 -0.0056694 -2.8219E-06 0.18136 9.0275E-05 497.755011599241 501.761969868842 28.625 0.81821 28.625 28.446 29.265 0 183 60 8 0 0 0 7.7735E-06 2 11469 121.62 77.789 1 2.6216 2.2305 0 62793000 16963000 45830000 991 1569 402 411 1549;1550 1549 1327 AFMGTPVQK 9 1 0 Oxidation (M) _AFM(ox)GTPVQK_ AFM(1)GTPVQK AFM(91.63)GTPVQK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.755 2 497.754953 993.495352 79198.44 -0.20943 -0.00010424 0.30121 0.00014993 0.091777 4.5682E-05 497.755126088867 501.762155492845 28.874 0.72834 28.874 28.631 29.36 0 186 46 9 0 0 0 0.00047619 2 11033 91.626 43.123 1 2.7783 2.3075 0 36926000 10773000 26153000 992 1569 402 411 1551;1552 1552 1327 AFMGTPVQK 9 1 0 Unmodified _AFMGTPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.7646 2 489.757495 977.500437 88140.46 0.41386 0.00020269 0.23079 0.00011303 0.64465 0.00031572 489.757563190149 493.764839190695 42.582 0.2895 42.582 42.444 42.734 0 75 24 4 0 0 0 0.0016482 1 22644 82.671 65.431 1 1.3106 1.3468 0 17494000 7326400 10168000 993 1569 402 412 1553 1553 AFMGTPVQK 9 1 0 Unmodified _AFMGTPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.7642 2 489.757495 977.500437 86555.37 0.050295 2.4632E-05 0.24299 0.00011901 0.29329 0.00014364 489.757475774726 493.76464329486 48.762 1.0496 48.762 48.284 49.334 0 282 82 5 0 0 0 0.029026 2 23606 46.426 42.069 1 3.7238 2.9508 0 10332000 1937100 8395400 994 1569 402 412 1554;1555 1554 AFMGTPVQK 9 1 0 Unmodified _AFMGTPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.7576 2 489.757495 977.500437 86400.34 -0.067538 -3.3077E-05 0.22224 0.00010884 0.1547 7.5767E-05 489.757411233959 493.764669975429 48.982 1.0515 48.982 48.496 49.548 0 300 83 6 0 0 0 0.015615 2 23286 54.611 54.611 1 3.8232 3.132 0 8651400 1895400 6755900 995 1569 402 412 1556;1557 1557 AFMVTDEDIR 10 0 1 Oxidation (M) _AFM(ox)VTDEDIR_ AFM(1)VTDEDIR AFM(59.35)VTDEDIR 0 1 0 O95983;B3KMA8;K7EIE8 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.782 2 606.781896 1211.54924 79703.12 0.37059 0.00022486 0.55067 0.00033413 0.92125 0.000559 606.781810611476 611.78596756073 62.028 0.82276 62.028 61.496 62.319 0 157 66 4 0 0 0 0.0029208 2 35395 59.35 52.614 1 0.65931 0.69066 0 12520000 7707900 4811800 996 1432 403 413 1558;1559 1558 1122 AFMVTDEDIR 10 0 1 Oxidation (M) _AFM(ox)VTDEDIR_ AFM(1)VTDEDIR AFM(69.95)VTDEDIR 0 1 0 O95983;B3KMA8;K7EIE8 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.7822 2 606.781896 1211.54924 83288.36 0.39449 0.00023937 -0.1602 -9.7208E-05 0.23429 0.00014216 606.781505413569 611.785863097515 60.88 0.60921 60.88 60.676 61.285 0 94 58 4 0 0 0 0.0010893 1 35577 69.954 65.341 1 0.63745 0.62879 0 12934000 8183100 4751100 997 1432 403 413 1560 1560 1122 AFNSSSFNSNTFLTR 15 0 1 Unmodified _AFNSSSFNSNTFLTR_ 0 0 0 B4DY16;A0A024R1U0;P46060;B4E0U0;Q9BSK3 B4DY16 B4DY16 RANGAP1 Ran GTPase-activating protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 851.9081 2 846.902451 1691.79035 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.538 1 89.538 89.038 90.038 0 0 0 0 0.00050404 1 54052 80.469 70.981 1 998 90 404 414 1561 1561 AFNSSSFNSNTFLTR 15 0 1 Unmodified _AFNSSSFNSNTFLTR_ 0 0 0 B4DY16;A0A024R1U0;P46060;B4E0U0;Q9BSK3 B4DY16 B4DY16 RANGAP1 Ran GTPase-activating protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 851.9084 2 846.902451 1691.79035 NaN NaN NaN 0.023475 1.9881E-05 NaN NaN NaN NaN 88.531 0.20662 88.531 88.396 88.602 0 0 0 0 2.6864E-23 1 54575 140.14 123.23 1 NaN NaN 0 8838700 0 8838700 999 90 404 414 1562 1562 AFNSVDPTFDNSVPSK 16 1 0 Unmodified _AFNSVDPTFDNSVPSK_ 0 0 0 Q99543;Q6P5S9;H7C3L7;C9IZ83 Q99543 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 866.9185 2 862.909941 1723.80533 NaN NaN NaN -0.35324 -0.00030482 NaN NaN NaN NaN 78.217 0.35123 78.217 78.067 78.418 0 0 0 0 0.0038892 2 46253 55.04 45.353 1 NaN NaN 0 7224100 0 7224100 1000 1993 405 415 1563;1564 1563 AFNSVDPTFDNSVPSK 16 1 0 Unmodified _AFNSVDPTFDNSVPSK_ 0 0 0 Q99543;Q6P5S9;H7C3L7;C9IZ83 Q99543 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 863.4116 2 862.909941 1723.80533 66548.37 0.70948 0.00061222 0.076949 6.64E-05 0.78643 0.00067862 863.411729217939 866.917097013893 77.294 0.35432 77.294 77.2 77.554 0 99 27 6 0 0 0 0.001084 3 46763 46.706 45.743 1 1.624 1.644 0 13029000 7062500 5966600 1001 1993 405 415 1565;1566;1567 1566 AFPEHFTYEPNEADAAQGYR 20 0 1 Unmodified _AFPEHFTYEPNEADAAQGYR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.015 3 771.678418 2312.01342 70215.42 0.52767 0.00040719 -0.20119 -0.00015525 0.32648 0.00025194 772.012530516461 775.348482369477 77.216 0.7715 77.216 76.877 77.649 0 373 65 8 0 0 0 7.8758E-06 2 45488 37.112 37.112 1 0.37672 0.38715 0 25374000 17890000 7483800 1002 1479 406 416 1568;1569 1569 AFPEHFTYEPNEADAAQGYR 20 0 1 Unmodified _AFPEHFTYEPNEADAAQGYR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.0155 3 771.678418 2312.01342 69881.49 0.37299 0.00028783 0.13052 0.00010072 0.50351 0.00038855 772.012730508986 775.014595958272 76.029 0.68311 76.029 75.737 76.421 0 375 61 9 0 0 0 1.9649E-06 2 45791 44.587 44.562 1 0.42063 0.46225 0 40602000 27527000 13075000 1003 1479 406 416 1570;1571 1571 AFPEHFTYEPNEADAAQGYR 20 0 1 Unmodified _AFPEHFTYEPNEADAAQGYR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.6797 3 771.678418 2312.01342 68411.99 0.87735 0.00067703 -0.27224 -0.00021008 0.60511 0.00046695 772.012511476279 775.348595237937 88.429 1.1509 88.429 88.063 89.214 0 548 72 11 0 0 0 8.697E-07 2 48625 64.2 64.2 1 0.50219 0.41676 0 20799000 13594000 7204700 1004 1479 406 416 1572;1573 1573 AFPEHFTYEPNEADAAQGYR 20 0 1 Unmodified _AFPEHFTYEPNEADAAQGYR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.3494 3 771.678418 2312.01342 69012.08 0.63369 0.00048901 0.082004 6.3281E-05 0.71569 0.00055229 772.01274954284 775.348991978004 88.401 0.94821 88.401 88.038 88.986 0 435 56 11 0 0 0 9.5602E-07 2 47779 45.347 45.347 1 0.46872 0.40467 0 22728000 14921000 7807100 1005 1479 406 416 1574;1575 1574 AFQAAFR 7 0 1 Unmodified _AFQAAFR_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00;A0PJ76;F5GZK7;F5H431 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.7167 2 405.716488 809.418422 93672.41 0.40027 0.0001624 0.58719 0.00023823 0.98746 0.00040063 405.716562998022 410.720729660724 44.62 0.8331 44.62 44.279 45.112 -3.8147E-06 324 74 6 0 0 0 0.0038206 2 23951 133.99 61.993 1 0.89604 1.0248 0 127650000 68171000 59477000 1006 908 407 417 1576;1577 1577 AFQAAFR 7 0 1 Unmodified _AFQAAFR_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00;A0PJ76;F5GZK7;F5H431 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.7205 2 405.716488 809.418422 94099.55 0.84394 0.0003424 -0.16268 -6.6001E-05 0.68126 0.0002764 405.71628478193 410.720439454948 43.958 1.0724 43.958 43.494 44.566 0 366 91 6 0 0 0 0.025781 2 23781 88.734 30.074 1 0.90913 1.0352 0 130290000 70202000 60087000 1007 908 407 417 1578;1579 1578 AFQAAFR 7 0 1 Unmodified _AFQAAFR_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00;A0PJ76;F5GZK7;F5H431 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 405.7165 2 405.716488 809.418422 93754.97 -0.40104 -0.00016271 0.60506 0.00024548 0.20403 8.2778E-05 405.716563846893 410.720795560699 51.36 1.0483 51.36 50.808 51.857 0 331 69 7 0 0 0 0.04687 2 24655 56.51 19.923 1 1.562 1.2705 0 12388000 4853200 7535300 1008 908 407 417 1580;1581 1581 AFQEGIAK 8 1 0 Unmodified _AFQEGIAK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.2418 2 432.23471 862.454868 NaN NaN NaN 0.27301 0.00011801 NaN NaN NaN NaN 28.45 0.51704 28.45 28.203 28.72 0 0 0 0 0.0090383 1 13585 79.116 8.2035 1 NaN NaN 0 84408000 0 84408000 1009 2103 408 418 1582 1582 AFQEGIAK 8 1 0 Unmodified _AFQEGIAK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 436.2418 2 432.23471 862.454868 NaN NaN NaN -0.66394 -0.00028698 NaN NaN NaN NaN 32.923 0.75565 32.923 32.313 33.068 3.8147E-06 0 0 0 0.0029587 1 14346 105.39 8.3196 1 NaN NaN 0 33029000 0 33029000 1010 2103 408 418 1583 1583 AFQEGIAK 8 1 0 Unmodified _AFQEGIAK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 436.2417 2 432.23471 862.454868 91858.17 -0.20555 -8.8848E-05 0.58826 0.00025427 0.38271 0.00016542 432.235371774139 436.241970102599 32.973 0.33722 32.973 32.821 33.158 0 65 19 7 0 0 0 0.0018287 1 13857 105.39 8.3196 1 25.495 20.47 0 22209000 1036900 21173000 1011 2103 408 418 1584 1584 AFREEAIK 8 1 1 Unmodified _AFREEAIK_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 321.8466 3 321.846787 962.51853 104539.3 -0.34413 -0.00011076 0.22353 7.1942E-05 -0.1206 -3.8814E-05 321.846819802734 327.854281790875 23.299 0.47661 23.299 23.145 23.622 0 118 22 8 0 0 0 0.014161 2 9161 45.68 11.427 1 0.33809 0.4073 0 110000000 83171000 26831000 1012 1476 409 419 1585;1586 1585 AFREEAIK 8 1 1 Unmodified _AFREEAIK_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.2666 2 482.266542 962.51853 85668.93 -0.33488 -0.0001615 0.2383 0.00011493 -0.096577 -4.6576E-05 482.266647964064 491.277856244515 23.303 0.6209 23.303 23.045 23.666 0 151 29 8 0 0 0 0.0087504 1 9179 107.29 40.125 1 0.32814 0.39699 0 212160000 156010000 56153000 1013 1476 409 419 1587 1587 AFREEAIK 8 1 1 Unmodified _AFREEAIK_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.267 2 482.266542 962.51853 85857.07 -0.0044679 -2.1547E-06 0.15949 7.6918E-05 0.15503 7.4763E-05 482.266608696664 491.277786177373 22.732 0.76701 22.732 22.412 23.179 0 137 32 7 0 0 0 0.0050995 2 8665 125.31 54.79 1 0.40184 0.47611 0 234920000 162650000 72271000 1014 1476 409 419 1588;1589 1588 AFREEAIK 8 1 1 Unmodified _AFREEAIK_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 321.8471 3 321.846787 962.51853 104167.6 -0.055247 -1.7781E-05 0.11616 3.7387E-05 0.060916 1.9605E-05 321.84679087796 327.854265052905 22.747 0.78568 22.747 22.46 23.246 0 128 33 7 0 0 0 0.020294 1 8668 47.349 13.553 1 0.33893 0.39947 0 101910000 75732000 26175000 1015 1476 409 419 1590 1590 AFSAVDTDGNGTINAQELGAALK 23 1 0 Unmodified _AFSAVDTDGNGTINAQELGAALK_ 0 0 0 Q9NZT1 Q9NZT1 Q9NZT1 CALML5 Calmodulin-like protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1132.5667 2 1132.06368 2262.1128 NaN NaN NaN -0.15238 -0.0001725 NaN NaN NaN NaN 106.63 0.2663 106.63 106.54 106.81 7.6294E-06 0 0 0 9.8551E-05 1 66349 66.285 53.407 1 NaN NaN 0 3833900 3833900 0 1016 2089 410 420 1591 1591 AFSEIQGLTDQADK 14 1 0 Unmodified _AFSEIQGLTDQADK_ 0 0 0 B9EGR5;Q8IWI9;B4DVS1;H3BU53 B9EGR5;B4DVS1 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.8746 2 761.872827 1521.7311 70806.46 0.74247 0.00056567 0.80229 0.00061124 1.5448 0.0011769 761.874370206887 765.880685243309 78.093 0.42143 78.093 77.886 78.307 0 67 33 5 0 0 0 7.3204E-05 2 46169 89.548 89.548 1 0.65051 0.67583 0 11434000 6793100 4640700 1017 1121;1042 411 421 1592;1593 1592 AFSEIQGLTDQADK 14 1 0 Unmodified _AFSEIQGLTDQADK_ 0 0 0 B9EGR5;Q8IWI9;B4DVS1;H3BU53 B9EGR5;B4DVS1 B9EGR5 MGA MAX gene-associated protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.8733 2 761.872827 1521.7311 NaN NaN NaN 0.77683 0.00059185 NaN NaN NaN NaN 77.235 0.328 77.235 77.007 77.335 0 0 0 0 8.9508E-10 1 46627 112.13 88.806 1 NaN NaN 0 6045800 6045800 0 1018 1121;1042 411 421 1594 1594 AFSEIQGLTDQADK 14 1 0 Unmodified _AFSEIQGLTDQADK_ 0 0 0 B9EGR5;Q8IWI9;B4DVS1;H3BU53 B9EGR5;B4DVS1 B9EGR5 MGA MAX gene-associated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.8811 2 761.872827 1521.7311 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.237 1 77.237 76.737 77.737 0 0 0 0 1.2954E-10 1 46695 110.86 82.652 1 1019 1121;1042 411 421 1595 1595 AFSEIQGLTDQADK 14 1 0 Unmodified _AFSEIQGLTDQADK_ 0 0 0 B9EGR5;Q8IWI9;B4DVS1;H3BU53 B9EGR5;B4DVS1 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.8807 2 761.872827 1521.7311 72214.91 0.62517 0.0004763 0.10019 7.633E-05 0.72535 0.00055263 761.873358418853 765.879697123968 89.564 0.41534 89.564 89.385 89.8 0 93 26 6 0 0 0 0.0058425 1 49492 43.084 37.113 1 1.7212 1.43 0 2276300 949430 1326900 1020 1121;1042 411 421 1596 1596 AFSQFVR 7 0 1 Unmodified _AFSQFVR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;F5H6N4;Q05CG6 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.73 2 427.729595 853.444637 93432.81 0.22544 9.6428E-05 0.34958 0.00014952 0.57502 0.00024595 427.729648081929 432.733911965409 50.881 0.52898 50.881 50.634 51.163 0 151 43 6 0 0 0 0.012554 2 28737 105.27 56.058 1 0.58345 0.6374 0 37521000 23245000 14276000 1021 515 412 422 1597;1598 1598 AFSQFVRPLIAAK 13 1 1 Unmodified _AFSQFVRPLIAAK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;F5H6N4;Q05CG6 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.2856 3 483.285516 1446.83472 86612.02 0.3292 0.0001591 0.43772 0.00021154 0.76692 0.00037064 483.285435696493 489.293160199155 91.624 0.90139 91.624 91.188 92.089 0 314 74 6 0 0 0 5.2458E-05 2 55498 74.698 62.316 1 0.6907 0.81496 0 36153000 21665000 14488000 1022 515 413 423 1599;1600 1599 AFSSNPVVR 9 0 1 Unmodified _AFSSNPVVR_ 0 0 0 Q53F19 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.7645 2 488.764166 975.513779 96322.88 0.15325 7.4903E-05 -0.1951 -9.5359E-05 -0.041851 -2.0455E-05 488.764279980233 493.767990329538 38.26 0.33918 38.26 38.057 38.396 0 61 27 4 0 0 0 0.034102 1 20111 44.395 29.014 1 0.93541 0.94417 0 10278000 5600200 4677800 1023 1783 414 424 1601 1601 AFSYYGPLR 9 0 1 Unmodified _AFSYYGPLR_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.2744 2 537.274367 1072.53418 82422.41 0.49373 0.00026527 0.017199 9.2406E-06 0.51093 0.00027451 537.274393300935 542.278377454666 76.749 1.1923 76.749 76.369 77.561 -7.6294E-06 590 101 8 0 0 0 0.0020795 2 45143 80.229 71.316 1 1.1684 1.3818 0 278090000 126120000 151980000 1024 1772;1918 415 425 1602;1603 1603 AFSYYGPLR 9 0 1 Unmodified _AFSYYGPLR_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.2751 2 537.274367 1072.53418 82566.47 0.52541 0.00028229 0.025318 1.3603E-05 0.55073 0.00029589 537.274308790405 542.278428022435 75.678 1.312 75.678 75.074 76.386 0 607 117 9 0 0 0 0.00079465 3 45414 94.262 79.747 1 1.1749 1.3625 0 312800000 145830000 166970000 1025 1772;1918 415 425 1604;1605;1606 1606 AFSYYGPLR 9 0 1 Unmodified _AFSYYGPLR_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.2751 2 537.274367 1072.53418 82324.35 0.4877 0.00026203 0.05685 3.0544E-05 0.54455 0.00029257 537.274334222244 542.278350123283 87.528 1.0905 87.528 87.114 88.204 0 362 66 8 0 0 0 0.039815 2 47994 47.443 43.697 1 0.9279 0.76427 0 18217000 9308500 8908700 1026 1772;1918 415 425 1607;1608 1607 AFSYYGPLR 9 0 1 Unmodified _AFSYYGPLR_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.2744 2 537.274367 1072.53418 82301.52 0.51531 0.00027686 0.088513 4.7556E-05 0.60382 0.00032442 537.274199930859 542.278540139494 87.634 1.219 87.634 87.176 88.395 0 350 69 7 0 0 0 0.018064 2 47545 53.166 47.987 1 0.97277 0.81102 0 15894000 8104600 7789000 1027 1772;1918 415 425 1609;1610 1610 AFTGFIVEADTPGIQIGR 18 0 1 Unmodified _AFTGFIVEADTPGIQIGR_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;A0A0S2Z3A5;B4DJE7;B4DVE0 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 951.5039 2 946.499258 1890.98396 NaN NaN NaN -0.11427 -0.00010816 NaN NaN NaN NaN 118.29 0.48238 118.29 118.07 118.55 0 0 0 0 3.8338E-23 1 75826 120.57 106.01 1 NaN NaN 0 17205000 0 17205000 1028 545 416 426 1611 1611 AFTGFIVEADTPGIQIGR 18 0 1 Unmodified _AFTGFIVEADTPGIQIGR_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;A0A0S2Z3A5;B4DJE7;B4DVE0 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 951.5052 2 946.499258 1890.98396 62118.79 0.82064 0.00077674 0.17326 0.00016399 0.9939 0.00094073 946.499323662428 952.004797917469 117.87 0.51283 117.87 117.65 118.16 0 213 35 9 0 0 0 1.4437E-16 2 77310 156.36 156.36 1 2.5523 2.7908 0 35172000 10235000 24937000 1029 545 416 426 1612;1613 1612 AFTGFIVEADTPGIQIGR 18 0 1 Unmodified _AFTGFIVEADTPGIQIGR_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;A0A0S2Z3A5;B4DJE7;B4DVE0 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 952.0034 2 946.499258 1890.98396 61973.47 0.59988 0.00056779 1.0936 0.0010351 1.6935 0.0016029 947.002257834612 952.005644336165 130.32 0.39275 130.32 130.08 130.47 0 72 18 6 0 0 0 5.4051E-05 2 78863 78.324 78.324 1 1.043 0.87599 0 4287800 2178700 2109100 1030 545 416 426 1614;1615 1614 AFTKPEEACSFILSADFPALVVK 23 2 0 Unmodified _AFTKPEEACSFILSADFPALVVK_ 0 0 1 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;H7C366 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.119 3 847.441692 2539.30325 66258.59 1.0281 0.00087129 -0.93608 -0.00079327 0.092064 7.8018E-05 847.77500983832 853.118508581847 126.38 1.1789 126.38 126.1 127.27 0 274 80 6 0 0 0 0.0012778 2 82467 29.576 26.738 1 1.149 1.3439 0 12680000 6980900 5698900 1031 1507 417 427 1616;1617 1616 AFTKPEEACSFILSADFPALVVK 23 2 0 Unmodified _AFTKPEEACSFILSADFPALVVK_ 0 0 1 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;H7C366 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.775 3 847.441692 2539.30325 66137.83 1.0081 0.00085434 -0.96887 -0.00082106 0.039265 3.3275E-05 847.77490945883 853.118260812635 125.88 1.1148 125.88 125.28 126.4 0 214 72 6 0 0 0 0.0018183 1 84147 26.417 23.576 1 0.76828 0.87949 0 19031000 9430000 9601000 1032 1507 417 427 1618 1618 AFTQLSNLQSHR 12 0 1 Unmodified _AFTQLSNLQSHR_ 0 0 0 D3DUR9;Q8TF68;B4DQU6 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3689 2 701.365307 1400.71606 74237.91 0.95951 0.00067297 0.21155 0.00014838 1.1711 0.00082134 701.366413541561 706.36930309808 48.709 0.4472 48.709 48.521 48.969 0 104 33 5 0 0 0 4.9568E-23 1 26576 159.83 130.36 1 0.79436 0.82796 0 21288000 12097000 9190800 1033 1195 418 428 1619 1619 AFTQLSNLQSHR 12 0 1 Unmodified _AFTQLSNLQSHR_ 0 0 0 D3DUR9;Q8TF68;B4DQU6 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.3682 2 701.365307 1400.71606 NaN NaN NaN -0.94272 -0.00066119 NaN NaN NaN NaN 47.232 0.28297 47.232 47.112 47.395 0 0 0 0 3.9223E-13 1 26189 121.6 87.217 1 NaN NaN 0 22715000 0 22715000 1034 1195 418 428 1620 1620 AFTQLSNLQSHR 12 0 1 Unmodified _AFTQLSNLQSHR_ 0 0 0 D3DUR9;Q8TF68;B4DQU6 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.2485 3 467.91263 1400.71606 87167.03 0.29068 0.00013601 -0.59952 -0.00028052 -0.30885 -0.00014451 468.245511465051 471.248707830881 56.259 0.79192 56.259 56.006 56.798 -3.8147E-06 162 50 6 0 0 0 0.029998 1 28257 20.427 15.428 1 1.5368 1.3019 0 9356500 2838100 6518400 1035 1195 418 428 1621 1621 AFTQLSNLQSHR 12 0 1 Unmodified _AFTQLSNLQSHR_ 0 0 0 D3DUR9;Q8TF68;B4DQU6 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.3699 2 701.365307 1400.71606 72429.2 0.67706 0.00047486 0.025447 1.7848E-05 0.7025 0.00049271 701.365791989581 706.369264013151 56.252 0.52619 56.252 55.952 56.478 0 146 33 8 0 0 0 5.2274E-08 1 28272 113.63 76.438 1 1.913 1.6434 0 7998000 2954700 5043300 1036 1195 418 428 1622 1622 AFTQLSNLQSHR 12 0 1 Unmodified _AFTQLSNLQSHR_ 0 0 0 D3DUR9;Q8TF68;B4DQU6 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 706.3698 2 701.365307 1400.71606 72999.99 0.60583 0.00042491 0.25445 0.00017846 0.86028 0.00060337 701.366071778203 706.369386004001 56.572 0.45373 56.572 56.348 56.801 0 157 32 7 0 0 0 4.0397E-05 1 27864 99.283 78.412 1 2.064 1.7141 0 5879700 1950400 3929300 1037 1195 418 428 1623 1623 AFVAGVLPFK 10 1 0 Unmodified _AFVAGVLPFK_ 0 0 0 A8K8K1;O00442 A8K8K1 A8K8K1 RTCA RNA 3-terminal phosphate cyclase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.8205 2 524.813128 1047.6117 84493.57 0.90481 0.00047486 -0.30703 -0.00016113 0.59779 0.00031373 524.812626064971 528.820154014122 108.55 0.57561 108.55 108.2 108.78 -7.6294E-06 103 41 5 0 0 0 0.0036667 1 67810 63.48 63.48 1 2.6781 2.7575 0 10799000 3792900 7006200 1038 778 419 429 1624 1624 AFVAIGDYNGHVGLGVK 17 1 0 Unmodified _AFVAIGDYNGHVGLGVK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.6476 3 572.973778 1715.8995 80229.6 1.1109 0.00063653 -0.033316 -1.9089E-05 1.0776 0.00061744 572.973580547335 575.64517983256 91.047 1.0975 91.047 90.646 91.744 0 536 88 9 0 0 0 6.151E-35 3 54944 129.93 129.93 1 0.98554 1.142 0 237160000 116010000 121160000 1039 1485 420 430 1625;1626;1627 1625 AFVAIGDYNGHVGLGVK 17 1 0 Unmodified _AFVAIGDYNGHVGLGVK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 858.9584 2 858.957029 1715.8995 66108.56 1.2902 0.0011082 0.216 0.00018554 1.5062 0.0012938 858.957045435464 862.96434919499 91.047 0.72517 91.047 90.75 91.475 0 261 58 7 0 0 0 1.1155E-06 1 55202 94.767 94.767 1 0.98264 1.0697 0 49064000 23364000 25700000 1040 1485 420 430 1628 1628 AFVAIGDYNGHVGLGVK 17 1 0 Unmodified _AFVAIGDYNGHVGLGVK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.9743 3 572.973778 1715.8995 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.728 1 91.728 91.228 92.228 0 0 0 0 0.00012337 1 55567 84.753 78.939 1 1041 1485 420 430 1629 1629 AFVAIGDYNGHVGLGVK 17 1 0 Unmodified _AFVAIGDYNGHVGLGVK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.9788 3 572.973778 1715.8995 80130.75 0.75572 0.00043301 -0.17154 -9.8288E-05 0.58418 0.00033472 572.973592751326 575.645110853806 89.804 1.2508 89.804 89.445 90.696 0 581 104 9 0 0 0 1.8006E-07 4 55344 79.771 79.771 1 0.99687 1.1556 0 215810000 99227000 116580000 1042 1485 420 430 1630;1631;1632;1633 1630 AFVAIGDYNGHVGLGVK 17 1 0 Unmodified _AFVAIGDYNGHVGLGVK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.963 2 858.957029 1715.8995 66743.53 0.72171 0.00061992 -0.32389 -0.00027821 0.39782 0.00034171 859.458368072918 863.465309061554 89.804 0.80231 89.804 89.551 90.353 0 216 69 6 0 0 0 6.2224E-06 1 55365 86.463 86.463 1 1.0327 1.1627 0 57479000 28715000 28764000 1043 1485 420 430 1634 1634 AFVAIGDYNGHVGLGVK 17 1 0 Unmodified _AFVAIGDYNGHVGLGVK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.6459 3 572.973778 1715.8995 79837.66 0.48711 0.0002791 0.023585 1.3514E-05 0.51069 0.00029261 572.973748408685 575.6452195876 103.69 1.403 103.69 103.17 104.57 0 417 83 10 0 0 0 1.5569E-05 2 58908 57.499 57.499 1 0.86367 0.73321 0 61053000 31725000 29328000 1044 1485 420 430 1635;1636 1636 AFVAIGDYNGHVGLGVK 17 1 0 Unmodified _AFVAIGDYNGHVGLGVK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.4577 2 858.957029 1715.8995 65662.61 0.57719 0.00049578 -0.31736 -0.0002726 0.25983 0.00022318 859.45810584691 863.465376167236 103.71 0.69595 103.71 103.47 104.17 0 232 45 7 0 0 0 6.8926E-05 1 58958 75.819 75.819 1 0.81078 0.65956 0 30162000 15911000 14250000 1045 1485 420 430 1637 1637 AFVAIGDYNGHVGLGVK 17 1 0 Unmodified _AFVAIGDYNGHVGLGVK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.9797 3 572.973778 1715.8995 79760.34 0.26822 0.00015369 0.28013 0.0001605 0.54835 0.00031419 572.973877538498 575.645392156228 103.42 1.0466 103.42 103.02 104.07 -7.6294E-06 421 70 10 0 0 0 4.0131E-07 2 57818 69.331 69.331 1 0.8538 0.71369 0 43937000 23790000 20148000 1046 1485 420 430 1638;1639 1639 AFVAIGDYNGHVGLGVK 17 1 0 Unmodified _AFVAIGDYNGHVGLGVK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 863.4666 2 858.957029 1715.8995 66108.83 0.31687 0.00027218 -0.036679 -3.1505E-05 0.28019 0.00024067 858.956852893814 862.964264362711 103.38 0.74748 103.38 103.17 103.92 0 264 50 8 0 0 0 0.00017918 2 57828 51.841 51.841 1 0.89448 0.71656 0 20153000 10412000 9741300 1047 1485 420 430 1640;1641 1641 AFVDFLSDEIK 11 1 0 Unmodified _AFVDFLSDEIK_ 0 0 0 A8K651;Q07021 A8K651 A8K651 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.3377 2 642.329536 1282.64452 76107.25 0.83438 0.00053595 0.23479 0.00015081 1.0692 0.00068676 642.330098999869 646.336436457179 115.52 0.62646 115.52 115.23 115.85 0 211 42 6 0 0 0 1.8777E-05 2 73396 105.4 105.4 1 1.9341 2.0822 0 40676000 14286000 26390000 1048 756 421 431 1642;1643 1642 AFVDFLSDEIK 11 1 0 Unmodified _AFVDFLSDEIK_ 0 0 0 A8K651;Q07021 A8K651 A8K651 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3373 2 642.329536 1282.64452 76132.53 0.83768 0.00053807 0.3295 0.00021165 1.1672 0.00074971 642.330261862927 646.336414230764 115 0.63411 115 114.7 115.33 0 229 40 8 0 0 0 1.8777E-05 2 74782 105.4 105.4 1 1.7786 1.974 0 48817000 15444000 33373000 1049 756 421 431 1644;1645 1644 AFVDFLSDEIK 11 1 0 Unmodified _AFVDFLSDEIK_ 0 0 0 A8K651;Q07021 A8K651 A8K651 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.3306 2 642.329536 1282.64452 76962.45 0.78254 0.00050265 0.42612 0.00027371 1.2087 0.00077636 642.329775729471 646.336186489456 126.76 0.61578 126.76 126.42 127.04 0 128 24 8 0 0 0 0.0080859 1 76241 51.436 51.436 1 0.84937 0.68066 0 8395000 4531800 3863200 1050 756 421 431 1646 1646 AFVDFLSDEIK 11 1 0 Unmodified _AFVDFLSDEIK_ 0 0 0 A8K651;Q07021 A8K651 A8K651 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.8326 2 642.329536 1282.64452 76133.97 0.63664 0.00040893 0.55858 0.00035879 1.1952 0.00076773 642.329709703104 646.336482930432 126.61 0.56787 126.61 126.3 126.87 -7.6294E-06 128 24 8 0 0 0 0.019396 1 75159 44.309 43.961 1 0.86534 0.70596 0 7877600 4658400 3219200 1051 756 421 431 1647 1647 AFVEDSEDEDGAGEGGSSLLQK 22 1 0 Unmodified _AFVEDSEDEDGAGEGGSSLLQK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1125.0032 2 1120.49549 2238.97643 NaN NaN NaN 0.041773 4.6807E-05 NaN NaN NaN NaN 74.703 0.21342 74.703 74.586 74.799 0 0 0 0 4.2584E-18 2 44968 93.494 91.855 1 NaN NaN 0 7571000 0 7571000 1052 1916 422 432 1648;1649 1648 AFVEDSEDEDGAGEGGSSLLQK 22 1 0 Unmodified _AFVEDSEDEDGAGEGGSSLLQK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1124.5046 2 1120.49549 2238.97643 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.498 1 74.498 73.998 74.998 0 0 0 0 0.0021717 1 44832 48.704 43.32 1 1053 1916 422 432 1650 1650 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(82.48)EEGEFSEAR 0 1 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q15670;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA4A;TUBA1A;TUBA2;TUBA3C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.3459 3 782.675909 2345.0059 68229.42 1.166 0.00091257 -0.34434 -0.0002695 0.82162 0.00064307 783.010996294068 786.011259715154 90.861 1.2243 90.861 90.354 91.579 0 529 100 8 0 0 0 1.3853E-07 2 55104 82.482 81.924 1 1.5877 1.7082 0 47417000 16914000 30503000 1054 922;1257;1659;1869 423 433 1651;1652 1652 754 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(92.31)EEGEFSEAR 0 1 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q15670;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA4A;TUBA1A;TUBA2;TUBA3C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.0093 3 782.675909 2345.0059 68405.45 0.61717 0.00048304 -0.30883 -0.00024172 0.30834 0.00024133 783.010909017223 786.011102378649 89.273 1.3842 89.273 88.858 90.242 0 514 118 8 0 0 0 1.5222E-09 2 55393 92.307 92.307 1 1.5562 1.7906 0 74904000 30302000 44603000 1055 922;1257;1659;1869 423 433 1653;1654 1653 754 AFVSMVYSEEGAEDR 15 0 1 Oxidation (M) _AFVSM(ox)VYSEEGAEDR_ AFVSM(1)VYSEEGAEDR AFVSM(98.16)VYSEEGAEDR 0 1 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709;Q68EN4;H0Y7K8;Q5H934;Q7Z4C6 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.3772 2 853.372334 1704.73012 NaN NaN NaN -0.12023 -0.00010261 NaN NaN NaN NaN 62.541 0.32577 62.541 62.337 62.663 -3.8147E-06 0 0 0 1.9589E-07 1 36632 98.156 88.968 1 NaN NaN 0 4157800 0 4157800 1056 1739 424 434 1655 1655 1568 AFVYINEYR 9 0 1 Unmodified _AFVYINEYR_ 0 0 0 O43463;B4DMP6;Q14828 O43463 O43463 SUV39H1;MG44 Histone-lysine N-methyltransferase SUV39H1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.7988 2 587.798206 1173.58186 NaN NaN NaN 0.40255 0.00023662 NaN NaN NaN NaN 77.125 0.73784 77.125 76.784 77.522 0 0 0 0 0.016025 1 45368 61.999 44.634 1 NaN NaN 0 21667000 21667000 0 1057 1385 425 435 1656 1656 AFVYINEYR 9 0 1 Unmodified _AFVYINEYR_ 0 0 0 O43463;B4DMP6;Q14828 O43463 O43463 SUV39H1;MG44 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.7987 2 587.798206 1173.58186 80910.5 0.42191 0.000248 0.37395 0.00021981 0.79586 0.0004678 587.798312742156 592.802503775834 75.91 1.0498 75.91 75.491 76.541 0 340 93 7 0 0 0 0.0074258 1 45805 61.999 40.318 1 1.0243 1.179 0 74341000 36735000 37607000 1058 1385 425 435 1657 1657 AFVYINEYR 9 0 1 Unmodified _AFVYINEYR_ 0 0 0 O43463;B4DMP6;Q14828 O43463 O43463 SUV39H1;MG44 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.8029 2 587.798206 1173.58186 80311.45 0.60086 0.00035319 0.27117 0.0001594 0.87204 0.00051258 587.798130409893 592.802457753559 88.026 0.9842 88.026 87.632 88.616 0 259 59 7 0 0 0 0.0074258 2 48489 61.999 45.223 1 1.631 1.3642 0 10300000 3930500 6369100 1059 1385 425 435 1658;1659 1659 AFVYINEYR 9 0 1 Unmodified _AFVYINEYR_ 0 0 0 O43463;B4DMP6;Q14828 O43463 O43463 SUV39H1;MG44 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.7982 2 587.798206 1173.58186 80315.33 0.48947 0.00028771 0.48023 0.00028228 0.9697 0.00056999 587.798307401593 592.802561068077 88.098 0.82005 88.098 87.68 88.5 7.6294E-06 195 46 6 0 0 0 0.017716 2 47579 52.716 39.137 1 1.5942 1.3049 0 9021800 3430200 5591500 1060 1385 425 435 1660;1661 1660 AFYPEEISSMVLTK 14 1 0 Oxidation (M) _AFYPEEISSM(ox)VLTK_ AFYPEEISSM(1)VLTK AFYPEEISSM(73.44)VLTK 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.4068 2 815.905282 1629.79601 66143.84 0.76807 0.00062667 -0.58977 -0.0004812 0.1783 0.00014548 816.405712279471 819.91257969499 102.28 0.93211 102.28 101.81 102.75 -7.6294E-06 393 76 7 0 0 0 8.2948E-05 2 63023 73.435 71.555 1 0.85853 0.92244 0 39725000 19401000 20324000 1061 533 426 436 1662;1663 1663 392 AFYPEEISSMVLTK 14 1 0 Oxidation (M) _AFYPEEISSM(ox)VLTK_ AFYPEEISSM(1)VLTK AFYPEEISSM(64.12)VLTK 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.9127 2 815.905282 1629.79601 NaN NaN NaN 0.047428 3.8697E-05 NaN NaN NaN NaN 101.53 0.84362 101.53 101.17 102.01 0 0 0 0 0.00089705 1 62271 64.121 46.257 1 NaN NaN 0 20255000 0 20255000 1062 533 426 436 1664 1664 392 AFYPEEISSMVLTK 14 1 0 Oxidation (M) _AFYPEEISSM(ox)VLTK_ AFYPEEISSM(1)VLTK AFYPEEISSM(51.84)VLTK 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.9067 2 815.905282 1629.79601 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.46 1 101.46 100.96 101.96 -7.6294E-06 0 0 0 0.0044512 1 62348 51.841 38.488 1 1063 533 426 436 1665 1665 392 AFYPEEISSMVLTK 14 1 0 Oxidation (M) _AFYPEEISSM(ox)VLTK_ AFYPEEISSM(1)VLTK AFYPEEISSM(54.02)VLTK 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.9055 2 815.905282 1629.79601 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.5 1 101.5 101 102 0 0 0 0 0.0032407 1 62382 54.023 35.711 1 1064 533 426 436 1666 1666 392 AFYPEEISSMVLTK 14 1 0 Oxidation (M) _AFYPEEISSM(ox)VLTK_ AFYPEEISSM(1)VLTK AFYPEEISSM(105.2)VLTK 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.9125 2 815.905282 1629.79601 66762.2 0.65259 0.00053245 -0.54195 -0.00044218 0.11064 9.0271E-05 816.40563590728 819.912536023384 101.63 1.0989 101.63 101.04 102.14 0 410 86 7 0 0 0 1.2277E-06 2 64068 105.2 105.2 1 0.8834 0.96544 0 40416000 21390000 19026000 1065 533 426 436 1667;1668 1668 392 AFYPEEISSMVLTK 14 1 0 Oxidation (M) _AFYPEEISSM(ox)VLTK_ AFYPEEISSM(1)VLTK AFYPEEISSM(55.45)VLTK 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.4146 2 815.905282 1629.79601 67034.96 1.1503 0.00093854 1.7546 0.0014316 2.9049 0.0023701 816.410998222722 819.912018145008 113.84 0.59248 113.84 113.46 114.05 7.6294E-06 115 26 7 0 0 0 0.00057711 2 66348 55.452 39.199 1 0.74816 0.59189 0 6196200 3280300 2915900 1066 533 426 436 1669;1670 1669 392 AFYPEEISSMVLTK 14 1 0 Oxidation (M) _AFYPEEISSM(ox)VLTK_ AFYPEEISSM(1)VLTK AFYPEEISSM(55.45)VLTK 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 819.912 2 815.905282 1629.79601 67011.05 0.75918 0.00061942 0.52999 0.00043242 1.2892 0.0010518 815.906019459193 819.911950539218 113.65 0.43689 113.65 113.44 113.88 7.6294E-06 81 21 5 0 0 0 0.00057711 2 65363 55.452 55.452 1 0.7975 0.65064 0 5717300 3444800 2272400 1067 533 426 436 1671;1672 1671 392 AFYPEEISSMVLTK 14 1 0 Unmodified _AFYPEEISSMVLTK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.9087 2 807.907824 1613.8011 68288.15 0.67501 0.00054535 0.91953 0.0007429 1.5945 0.0012882 808.41072367204 811.915331023287 126.95 0.58179 126.95 126.66 127.24 7.6294E-06 128 24 8 0 0 0 0.0093591 1 76417 37.144 37.144 1 1.3374 1.0699 0 7118700 3389800 3728800 1068 533 426 437 1673 1673 AFYPEEISSMVLTK 14 1 0 Unmodified _AFYPEEISSMVLTK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.9149 2 807.907824 1613.8011 68005.03 0.59773 0.00048291 1.1226 0.00090695 1.7203 0.0013899 807.909592592918 811.915411587266 126.76 0.5269 126.76 126.53 127.05 7.6294E-06 125 22 8 0 0 0 0.0014185 2 75328 66.498 49.866 1 1.1867 0.96698 0 6661400 3147600 3513800 1069 533 426 437 1674;1675 1674 AGAAAASAAAYAAYGYNVSK 20 1 0 Unmodified _AGAAAASAAAYAAYGYNVSK_ 0 0 0 A0A024R9R7;Q9ULG1;Q9NUK2 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 924.453 2 924.449765 1846.88498 65813.16 0.46118 0.00042634 0.12148 0.0001123 0.58266 0.00053864 924.450695842753 928.456839350316 90.073 0.41878 90.073 89.853 90.272 7.6294E-06 137 31 6 0 0 0 0.0048876 2 49883 29.013 27.502 1 1.8174 1.4155 0 3732400 1365100 2367300 1070 288 427 438 1676;1677 1677 AGAAAASAAAYAAYGYNVSK 20 1 0 Unmodified _AGAAAASAAAYAAYGYNVSK_ 0 0 0 A0A024R9R7;Q9ULG1;Q9NUK2 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 924.4506 2 924.449765 1846.88498 64660.06 0.26111 0.00024139 0.16745 0.0001548 0.42856 0.00039618 924.451035577385 928.456862167946 90.096 0.41042 90.096 89.863 90.273 -7.6294E-06 113 27 6 0 0 0 0.011487 1 49051 23.956 23.956 1 1.9808 1.6056 0 2766200 1016300 1750000 1071 288 427 438 1678 1678 AGAAGGASVGGSGLPR 16 0 1 Unmodified _AGAAGGASVGGSGLPR_ 0 0 0 B3KVD4;Q9P1Z0 B3KVD4 B3KVD4 ZBTB4 Zinc finger and BTB domain-containing protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8369 2 642.836382 1283.65821 NaN NaN NaN -0.029495 -1.896E-05 NaN NaN NaN NaN 37.523 0.26074 37.523 37.435 37.696 0 0 0 0 0.0020459 1 19141 61.435 23.96 1 NaN NaN 0 3775400 3775400 0 1072 949 428 439 1679 1679 AGAAGGASVGGSGLPR 16 0 1 Unmodified _AGAAGGASVGGSGLPR_ 0 0 0 B3KVD4;Q9P1Z0 B3KVD4 B3KVD4 ZBTB4 Zinc finger and BTB domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8372 2 642.836382 1283.65821 77242.32 0.86269 0.00055457 -0.48284 -0.00031039 0.37985 0.00024418 642.836261390948 647.83966923108 36.633 0.39679 36.633 36.472 36.869 0 76 28 4 0 0 0 5.4334E-09 3 18861 109.6 109.6 1 0.8818 0.88694 0 9298800 4179200 5119700 1073 949 428 439 1680;1681;1682 1680 AGAAGGASVGGSGLPR 16 0 1 Unmodified _AGAAGGASVGGSGLPR_ 0 0 0 B3KVD4;Q9P1Z0 B3KVD4 B3KVD4 ZBTB4 Zinc finger and BTB domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.8375 2 642.836382 1283.65821 78137.89 0.58239 0.00037438 0.22051 0.00014175 0.8029 0.00051613 642.836517675423 647.840489608891 43.027 0.39756 43.027 42.823 43.22 0 80 24 5 0 0 0 0.0023212 2 20214 41.401 41.401 1 1.2016 1.0544 0 1718800 696310 1022400 1074 949 428 439 1683;1684 1684 AGAAGGASVGGSGLPR 16 0 1 Unmodified _AGAAGGASVGGSGLPR_ 0 0 0 B3KVD4;Q9P1Z0 B3KVD4 B3KVD4 ZBTB4 Zinc finger and BTB domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.8403 2 642.836382 1283.65821 76787.71 0.34707 0.00022311 0.10216 6.567E-05 0.44923 0.00028878 642.836599154086 647.84052850324 43.165 0.39824 43.165 42.984 43.382 0 85 23 5 0 0 0 0.012071 1 19705 32.624 32.624 1 1.1427 0.98784 0 1636600 683620 952950 1075 949 428 439 1685 1685 AGAANSQLSTSQPSLR 16 0 1 Unmodified _AGAANSQLSTSQPSLR_ 0 0 0 G5EA44;B4DWJ9;F5H7W8;Q96C57 G5EA44 G5EA44 C12orf43 Uncharacterized protein C12orf43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.4078 2 794.4079 1586.80125 69884.1 0.73225 0.0005817 -0.046635 -3.7047E-05 0.68561 0.00054465 794.407862272107 799.412034823296 42.313 0.31657 42.313 42.14 42.456 0 62 22 4 0 0 0 5.6183E-05 2 22431 103.88 103.88 1 1.0596 1.0775 0 7315400 3237000 4078400 1076 1045 429 440 1686;1687 1686 AGAANSQLSTSQPSLR 16 0 1 Unmodified _AGAANSQLSTSQPSLR_ 0 0 0 G5EA44;B4DWJ9;F5H7W8;Q96C57 G5EA44 G5EA44 C12orf43 Uncharacterized protein C12orf43 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.4074 2 794.4079 1586.80125 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.584 1 41.584 41.084 42.084 0 0 0 0 9.7211E-05 1 22356 87.001 76.629 1 1077 1045 429 440 1688 1688 AGAANSQLSTSQPSLR 16 0 1 Unmodified _AGAANSQLSTSQPSLR_ 0 0 0 G5EA44;B4DWJ9;F5H7W8;Q96C57 G5EA44 G5EA44 C12orf43 Uncharacterized protein C12orf43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.9139 2 794.4079 1586.80125 69802.99 0.35648 0.00028319 0.18451 0.00014658 0.54099 0.00042977 794.408097573569 799.412206497235 49.732 0.48565 49.732 49.548 50.034 0 169 38 6 0 0 0 0.025239 1 23749 26.13 26.13 1 0.90535 0.81476 0 2018400 1144400 873930 1078 1045 429 440 1689 1689 AGAGAPVVGSGSSGGGNAFTGLGPVSTLPSLHGK 34 1 0 Unmodified _AGAGAPVVGSGSSGGGNAFTGLGPVSTLPSLHGK_ 0 0 0 A0A087X295;Q9NNW5;E9PDU5;B4E256;Q8NDH0 A0A087X295 A0A087X295 WDR6;DKFZp434F1720 WD repeat-containing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 991.8491 3 988.843976 2963.5101 62152.61 0.33756 0.0003338 0.61686 0.00060997 0.95442 0.00094377 989.515508389955 991.849383237881 106.4 0.4361 106.4 106.15 106.59 0 124 31 7 0 0 0 0.0069221 2 66118 20.869 20.869 1 0.56159 0.57067 0 18074000 9507100 8567200 1079 451 430 441 1690;1691 1691 AGAGAPVVGSGSSGGGNAFTGLGPVSTLPSLHGK 34 1 0 Unmodified _AGAGAPVVGSGSSGGGNAFTGLGPVSTLPSLHGK_ 0 0 0 A0A087X295;Q9NNW5;E9PDU5;B4E256;Q8NDH0 A0A087X295 A0A087X295 WDR6;DKFZp434F1720 WD repeat-containing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 991.8522 3 988.843976 2963.5101 62513.48 0.42849 0.00042371 -0.35035 -0.00034644 0.078133 7.7261E-05 989.511128778238 991.849365567558 105.73 0.63226 105.73 105.31 105.94 0 164 43 9 0 0 0 1.0027E-12 1 67174 51.9 51.9 1 0.44605 0.46979 0 19825000 12768000 7056600 1080 451 430 441 1692 1692 AGAGAPVVGSGSSGGGNAFTGLGPVSTLPSLHGK 34 1 0 Unmodified _AGAGAPVVGSGSSGGGNAFTGLGPVSTLPSLHGK_ 0 0 0 A0A087X295;Q9NNW5;E9PDU5;B4E256;Q8NDH0 A0A087X295 A0A087X295 WDR6;DKFZp434F1720 WD repeat-containing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 991.5151 3 988.843976 2963.5101 61950.39 0.2402 0.00023752 0.40306 0.00039856 0.64325 0.00063608 989.1780055388 991.84960427133 117.07 0.35113 117.07 116.91 117.26 0 62 15 6 0 0 0 0.059876 2 67956 5.5163 5.5163 1 0.81739 0.66519 0 7182000 3708200 3473800 1081 451 430 441 1693;1694 1693 AGAGSATLSMAYAGAR 16 0 1 Oxidation (M) _AGAGSATLSM(ox)AYAGAR_ AGAGSATLSM(1)AYAGAR AGAGSATLSM(42.98)AYAGAR 0 1 0 Q0QF37;Q75MT9;Q6FHZ0;A0A024R4K3;P40926;G3XAL0;B3KTM1 Q0QF37 Q0QF37 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.8588 2 735.853915 1469.69328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.732 1 45.732 45.232 46.232 3.8147E-06 0 0 0 0.0099847 1 24638 42.976 30.813 1 1082 156 431 442 1695 1695 132 AGAIAPCEVTVPAQNTGLGPEK 22 1 0 Unmodified _AGAIAPCEVTVPAQNTGLGPEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1090.556 2 1090.55444 2179.09432 58367.4 0.14266 0.00015558 0.034238 3.7339E-05 0.1769 0.00019292 1091.05589128618 1095.06289530994 85.926 0.90665 85.926 85.556 86.463 0 577 75 12 0 0 0 1.6001E-05 3 51461 47.037 47.037 1 0.93247 1.0831 0 248370000 128840000 119530000 1083 345 432 443 1696;1697;1698 1698 AGAIAPCEVTVPAQNTGLGPEK 22 1 0 Unmodified _AGAIAPCEVTVPAQNTGLGPEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1091.0551 2 1090.55444 2179.09432 58755.38 0.36095 0.00039363 -0.18271 -0.00019926 0.17824 0.00019438 1090.55496314505 1095.06269769511 85.201 0.83312 85.201 84.831 85.664 0 546 69 11 0 0 0 6.7164E-07 2 52179 51.771 51.771 1 0.975 1.1377 0 266930000 135050000 131890000 1084 345 432 443 1699;1700 1700 AGAIAPCEVTVPAQNTGLGPEK 22 1 0 Unmodified _AGAIAPCEVTVPAQNTGLGPEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1091.0559 2 1090.55444 2179.09432 57976.24 0.11245 0.00012264 -0.41628 -0.00045398 -0.30383 -0.00033134 1091.05565833187 1094.56092855922 98.591 0.93623 98.591 98.107 99.043 7.6294E-06 396 56 11 0 0 0 8.6623E-22 1 55604 116.58 116.58 1 0.94669 0.80387 0 61229000 32427000 28803000 1085 345 432 443 1701 1701 AGAIAPCEVTVPAQNTGLGPEK 22 1 0 Unmodified _AGAIAPCEVTVPAQNTGLGPEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1091.0554 2 1090.55444 2179.09432 57682.88 0.18648 0.00020336 -0.43219 -0.00047133 -0.24571 -0.00026796 1091.05567009575 1094.56085752655 98.442 0.76173 98.442 98.131 98.893 0 362 46 10 0 0 0 4.0429E-11 1 54658 88.78 88.78 1 0.92569 0.78475 0 64551000 32602000 31949000 1086 345 432 443 1702 1702 AGAISASGPELQGAGHSK 18 1 0 Unmodified _AGAISASGPELQGAGHSK_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.4236 2 819.415725 1636.8169 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.573 1 32.573 32.073 33.073 0 0 0 0 0.0062184 1 16171 47.915 34.487 1 1087 1696 433 444 1703 1703 AGAISASGPELQGAGHSK 18 1 0 Unmodified _AGAISASGPELQGAGHSK_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.4234 2 819.415725 1636.8169 69806.1 0.7406 0.00060686 -0.58278 -0.00047754 0.15782 0.00012932 819.916809937463 823.422363309502 32.041 0.24969 32.041 31.889 32.139 0 49 23 4 0 0 0 1.0017E-07 1 15890 89.663 89.663 1 1.8637 1.9294 0 11339000 4069700 7269100 1088 1696 433 444 1704 1704 AGAKPDQIGIITPYEGQR 18 1 1 Unmodified _AGAKPDQIGIITPYEGQR_ 0 0 1 A0A024R7L5;A0A024R7L8;Q92900;B3KY55 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.6826 3 638.674168 1913.00068 NaN NaN NaN 0.24145 0.00015421 NaN NaN NaN NaN 72.444 0.52696 72.444 72.18 72.707 0 0 0 0 5.1334E-09 2 42379 80.585 68.562 1 NaN NaN 0 12065000 0 12065000 1089 231 434 445 1705;1706 1706 AGAKPDQIGIITPYEGQR 18 1 1 Unmodified _AGAKPDQIGIITPYEGQR_ 0 0 1 A0A024R7L5;A0A024R7L8;Q92900;B3KY55 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.0175 3 638.674168 1913.00068 NaN NaN NaN 0.13568 8.6655E-05 NaN NaN NaN NaN 71.003 0.52236 71.003 70.714 71.237 0 0 0 0 0.0056865 1 42344 44.587 35.304 1 NaN NaN 0 16598000 0 16598000 1090 231 434 445 1707 1707 AGAKPDQIGIITPYEGQR 18 1 1 Unmodified _AGAKPDQIGIITPYEGQR_ 0 0 1 A0A024R7L5;A0A024R7L8;Q92900;B3KY55 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.0163 3 638.674168 1913.00068 77243.09 0.51297 0.00032762 -0.073217 -4.6762E-05 0.43975 0.00028086 638.674044196222 644.681806547694 82.732 0.48601 82.732 82.459 82.945 0 123 27 7 0 0 0 0.0054849 1 44175 21.848 21.848 1 1.2458 1.0738 0 1968500 809720 1158800 1091 231 434 445 1708 1708 AGALHAQVER 10 0 1 Unmodified _AGALHAQVER_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 351.1927 3 351.192957 1050.55704 99970 0.32212 0.00011313 -0.091284 -3.2058E-05 0.23084 8.1068E-05 351.192902488097 354.52897031221 19.263 0.32838 19.263 19.153 19.481 0 61 17 7 0 0 0 5.5687E-05 2 5956 94.692 65.736 1 0.89465 0.99076 0 62734000 31888000 30845000 1092 1997 435 446 1709;1710 1710 AGALHAQVER 10 0 1 Unmodified _AGALHAQVER_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.2859 2 526.285797 1050.55704 83454.95 0.51846 0.00027286 0.49648 0.00026129 1.0149 0.00053415 526.285889961229 531.290269775142 19.287 0.21254 19.287 19.166 19.379 0 40 9 6 0 0 0 1.8982E-09 2 5940 152.11 116.82 1 0.69709 0.74264 0 43600000 23065000 20535000 1093 1997 435 446 1711;1712 1711 AGALHAQVER 10 0 1 Unmodified _AGALHAQVER_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.286 2 526.285797 1050.55704 83384.87 -0.095024 -5.001E-05 0.64354 0.00033868 0.54851 0.00028867 526.286086958653 531.290062079984 19.184 0.26592 19.184 19.07 19.336 0 25 9 6 0 0 0 7.5667E-06 2 5664 121.73 89.798 1 0.96675 1.1167 0 55853000 29554000 26299000 1094 1997 435 446 1713;1714 1713 AGALHAQVER 10 0 1 Unmodified _AGALHAQVER_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 354.529 3 351.192957 1050.55704 99654.75 -0.35129 -0.00012337 0.084415 2.9646E-05 -0.26687 -9.3723E-05 351.192933264953 354.529026531822 19.211 0.25476 19.211 19.11 19.364 0 36 8 6 0 0 0 1.4865E-06 2 5666 91.658 61.094 1 0.85742 0.97988 0 89578000 48516000 41062000 1095 1997 435 446 1715;1716 1715 AGALHAQVER 10 0 1 Unmodified _AGALHAQVER_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 531.2901 2 526.285797 1050.55704 82188.78 -0.15097 -7.9453E-05 0.41358 0.00021766 0.26261 0.00013821 526.28598885254 531.290148752934 20.288 0.31967 20.288 20.123 20.442 0 37 9 7 0 0 0 0.0024806 2 5754 75.387 52.647 1 0.94841 0.79052 0 10608000 5430800 5177500 1096 1997 435 446 1717;1718 1717 AGALHAQVER 10 0 1 Unmodified _AGALHAQVER_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.29 2 526.285797 1050.55704 82867.69 -0.098747 -5.1969E-05 0.43102 0.00022684 0.33227 0.00017487 526.286016393566 531.29012652719 20.167 0.37571 20.167 19.937 20.313 0 56 12 8 0 0 0 0.0005206 2 5179 85.533 53.542 1 0.97076 0.79747 0 8667700 4275300 4392500 1097 1997 435 446 1719;1720 1719 AGALMMPLVDQLENR 15 0 1 2 Oxidation (M) _AGALM(ox)M(ox)PLVDQLENR_ AGALM(1)M(1)PLVDQLENR AGALM(47.89)M(47.89)PLVDQLENR 0 2 0 B2RWN5;B4E263;Q96ES5 B2RWN5 B2RWN5 HEATR1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.0668 2 845.418565 1688.82258 NaN NaN NaN 0.73064 0.0006177 NaN NaN NaN NaN 87.778 0.055443 87.778 87.732 87.788 0 0 0 0 0.0025767 1 52932 47.894 33.988 1 NaN NaN 0 4688200 4688200 0 1098 897 436 447 1721 1721 706;707 AGALMMPLVDQLENR 15 0 1 2 Oxidation (M) _AGALM(ox)M(ox)PLVDQLENR_ AGALM(1)M(1)PLVDQLENR AGALM(63.47)M(63.47)PLVDQLENR 0 2 0 B2RWN5;B4E263;Q96ES5 B2RWN5 B2RWN5 HEATR1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.4252 2 845.418565 1688.82258 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.144 1 87.144 86.644 87.644 0 0 0 0 0.0011397 1 52608 63.473 46.531 1 1099 897 436 447 1722 1722 706;707 AGALMMPLVDQLENR 15 0 1 2 Oxidation (M) _AGALM(ox)M(ox)PLVDQLENR_ AGALM(1)M(1)PLVDQLENR AGALM(72.34)M(72.34)PLVDQLENR 0 2 0 B2RWN5;B4E263;Q96ES5 B2RWN5 B2RWN5 HEATR1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.4237 2 845.418565 1688.82258 NaN NaN NaN 0.32123 0.00027158 NaN NaN NaN NaN 86.838 0.70486 86.838 86.411 87.116 7.6294E-06 0 0 0 8.7407E-05 1 53287 72.34 63.759 1 NaN NaN 0 15454000 0 15454000 1100 897 436 447 1723 1723 706;707 AGALMMPLVDQLENR 15 0 1 2 Oxidation (M) _AGALM(ox)M(ox)PLVDQLENR_ AGALM(1)M(1)PLVDQLENR AGALM(89.4)M(89.4)PLVDQLENR 0 2 0 B2RWN5;B4E263;Q96ES5 B2RWN5 B2RWN5 HEATR1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.4237 2 845.418565 1688.82258 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.222 1 87.222 86.722 87.722 -7.6294E-06 0 0 0 0.00010035 1 53748 89.403 68.031 1 1101 897 436 447 1724 1724 706;707 AGALMMPLVDQLENR 15 0 1 2 Oxidation (M) _AGALM(ox)M(ox)PLVDQLENR_ AGALM(1)M(1)PLVDQLENR AGALM(95.09)M(95.09)PLVDQLENR 0 2 0 B2RWN5;B4E263;Q96ES5 B2RWN5 B2RWN5 HEATR1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.4248 2 845.418565 1688.82258 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.292 1 87.292 86.792 87.792 0 0 0 0 3.3513E-06 1 53791 95.094 76.349 1 1102 897 436 447 1725 1725 706;707 AGAPPPSGSAVSTAPQQK 18 1 0 Unmodified _AGAPPPSGSAVSTAPQQK_ 0 0 0 A0A024R704;P78362 A0A024R704 A0A024R704 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.9339 2 825.925926 1649.8373 67937.9 0.52315 0.00043209 0.87849 0.00072557 1.4016 0.0011577 825.925890071452 829.933768293346 25.778 0.41663 25.778 25.543 25.96 0 66 22 4 0 0 0 0.00026166 2 11232 47.288 47.288 1 1.3642 1.3803 0 10150000 4834400 5315200 1103 212 437 448 1726;1727 1726 AGAPPPSGSAVSTAPQQK 18 1 0 Unmodified _AGAPPPSGSAVSTAPQQK_ 0 0 0 A0A024R704;P78362 A0A024R704 A0A024R704 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 825.9263 2 825.925926 1649.8373 68564.41 1.2163 0.0010046 0.31547 0.00026055 1.5317 0.0012651 825.926313248178 829.933145481451 25.486 0.34823 25.486 25.328 25.676 0 48 15 6 0 0 0 3.5032E-05 1 11114 63.091 63.091 1 1.4588 1.4988 0 11699000 3885800 7813000 1104 212 437 448 1728 1728 AGASPPPVSELDR 13 0 1 Unmodified _AGASPPPVSELDR_ 0 0 0 Q9NX00 Q9NX00 Q9NX00 TMEM160 Transmembrane protein 160 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.3327 2 648.333141 1294.65173 77009.16 0.83129 0.00053895 -0.15311 -9.9267E-05 0.67818 0.00043969 648.333106051387 653.337095636417 54.71 0.49726 54.71 54.45 54.947 0 133 42 4 0 0 0 0.00027369 2 31299 66.92 58.388 1 1.0083 0.99754 0 12417000 6912900 5503600 1105 2076 438 449 1729;1730 1730 AGAYDFPSPEWDTVTPEAK 19 1 0 Unmodified _AGAYDFPSPEWDTVTPEAK_ 0 0 0 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;H0Y6G2;Q8WU40;B3KY86;B3KTH7;H0Y9C2;B7Z1Z6;Q4G1A8;H7BXS4;Q8IWE0;Q7LDD5;A8K161;D3DVK8;Q53H78;A4D2J9;Q9UQM7;Q13554;D6R938;A0A024RDK3;E9PBG7;E9PF82;B7Z2B0;Q13557 Q5SWX3;D6R938 Q5SWX3 CAMK2G;CAMK2D;CAMK2B;CAMK2A Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1041.4775 2 1040.97855 2079.94255 61222.45 0.68311 0.0007111 -0.28514 -0.00029682 0.39797 0.00041428 1040.97881704513 1045.4867852329 105.9 0.32314 105.9 105.72 106.04 0 61 24 4 0 0 0 0.00049704 2 67330 40.066 37.116 1 1.2533 1.2813 0 9339800 3710500 5629200 1106 475;388 439 450 1731;1732 1732 AGDEIDEPSER 11 0 1 Unmodified _AGDEIDEPSER_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;B4E0X7 G3XAG1 G3XAG1 ZNF512 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.2681 2 609.267664 1216.52077 78484.35 0.21393 0.00013034 0.24023 0.00014636 0.45416 0.00027671 609.267843121946 614.271759684807 24.7 0.3913 24.7 24.508 24.899 0 86 17 7 0 0 0 4.2083E-08 1 10398 118.71 110.18 1 0.41956 0.43232 0 36764000 25337000 11426000 1107 1275 440 451 1733 1733 AGDEIDEPSER 11 0 1 Unmodified _AGDEIDEPSER_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;B4E0X7 G3XAG1 G3XAG1 ZNF512 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.268 2 609.267664 1216.52077 77766.2 0.26065 0.00015881 0.27845 0.00016965 0.53909 0.00032845 609.267818959499 614.271855420871 24.458 0.40713 24.458 24.248 24.655 0 95 18 7 0 0 0 1.4269E-05 1 10173 107.15 102.19 1 0.45746 0.50385 0 41102000 28711000 12391000 1108 1275 440 451 1734 1734 AGDEIDEPSER 11 0 1 Unmodified _AGDEIDEPSER_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;B4E0X7 G3XAG1 G3XAG1 ZNF512 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.2725 2 609.267664 1216.52077 77911.4 0.43217 0.00026331 -0.53229 -0.00032431 -0.10012 -6.1001E-05 609.267477841032 614.271155576176 27.748 0.70724 27.748 27.397 28.104 0 102 28 8 0 0 0 0.0018027 2 10848 64.711 64.711 1 0.81446 0.69199 0 5256600 2884600 2372000 1109 1275 440 451 1735;1736 1735 AGDEIDEPSER 11 0 1 Unmodified _AGDEIDEPSER_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;B4E0X7 G3XAG1 G3XAG1 ZNF512 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.2678 2 609.267664 1216.52077 77160.77 0.14543 8.8604E-05 -0.76209 -0.00046431 -0.61666 -0.00037571 609.267170833582 614.271102856662 27.984 0.58089 27.984 27.632 28.213 0 116 25 8 0 0 0 0.019169 1 10452 44.425 44.425 1 1.0039 0.86764 0 3423300 1583500 1839800 1110 1275 440 451 1737 1737 AGDMENAENILTVMR 15 0 1 2 Oxidation (M) _AGDM(ox)ENAENILTVM(ox)R_ AGDM(1)ENAENILTVM(1)R AGDM(62.09)ENAENILTVM(62.09)R 0 2 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.3897 2 848.387461 1694.76037 NaN NaN NaN -0.3587 -0.00030431 NaN NaN NaN NaN 70.845 0.68489 70.845 70.378 71.063 0 0 0 0 0.0005283 1 41122 62.088 55.39 1 NaN NaN 0 6587900 0 6587900 1111 1207 441 452 1738 1738 917;918 AGEAAELQDAEVESSAK 17 1 0 Unmodified _AGEAAELQDAEVESSAK_ 0 0 0 Q6PK21;A0A0A0MRN5;Q05BV5;Q9NZT2 Q6PK21 Q6PK21 OGFR Opioid growth factor receptor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.9001 2 852.89977 1703.78499 NaN NaN NaN 0.53166 0.00045346 NaN NaN NaN NaN 50.787 0.17393 50.787 50.692 50.866 0 0 0 0 0.042053 1 28046 34 18.244 1 NaN NaN 0 5619500 5619500 0 1112 469 442 453 1739 1739 AGEAAELQDAEVESSAK 17 1 0 Unmodified _AGEAAELQDAEVESSAK_ 0 0 0 Q6PK21;A0A0A0MRN5;Q05BV5;Q9NZT2 Q6PK21 Q6PK21 OGFR Opioid growth factor receptor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 856.9064 2 852.89977 1703.78499 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.773 1 50.773 50.273 51.273 0 0 0 0 0.00053766 1 28045 60.161 50.374 1 1113 469 442 453 1740 1740 AGEAAELQDAEVESSAK 17 1 0 Unmodified _AGEAAELQDAEVESSAK_ 0 0 0 Q6PK21;A0A0A0MRN5;Q05BV5;Q9NZT2 Q6PK21 Q6PK21 OGFR Opioid growth factor receptor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.4083 2 852.89977 1703.78499 NaN NaN NaN -0.62391 -0.00053213 NaN NaN NaN NaN 49.567 0.2499 49.567 49.418 49.667 0 0 0 0 2.1191E-13 2 27860 115.12 104.79 1 NaN NaN 0 5314800 0 5314800 1114 469 442 453 1741;1742 1741 AGEARPGPTAESASGPSEDPSVNFLK 26 1 1 Unmodified _AGEARPGPTAESASGPSEDPSVNFLK_ 0 0 1 Q13501;B4E3V2;E7EMC7;E9PFW8;E3WH17 Q13501 Q13501 SQSTM1;SQSTM1-ALK Sequestosome-1;Tyrosine-protein kinase receptor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.0903 3 857.748901 2570.22487 NaN NaN NaN 0.0035925 3.0814E-06 NaN NaN NaN NaN 74.544 0.43666 74.544 74.301 74.738 0 0 0 0 3.4394E-06 1 43793 52.773 43.207 1 NaN NaN 0 13175000 0 13175000 1115 1714 443 454 1743 1743 AGEARPGPTAESASGPSEDPSVNFLK 26 1 1 Unmodified _AGEARPGPTAESASGPSEDPSVNFLK_ 0 0 1 Q13501;B4E3V2;E7EMC7;E9PFW8;E3WH17 Q13501 Q13501 SQSTM1;SQSTM1-ALK Sequestosome-1;Tyrosine-protein kinase receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 863.7568 3 857.748901 2570.22487 65618.79 0.56602 0.0004855 -0.28386 -0.00024348 0.28215 0.00024202 858.083110108686 864.090329143231 73.315 0.4667 73.315 73.081 73.547 0 123 39 6 0 0 0 0.0013035 1 43899 25.144 25.144 1 2.3338 2.6452 0 16875000 5650000 11225000 1116 1714 443 454 1744 1744 AGEGTYALDSESCMEK 16 1 0 Oxidation (M) _AGEGTYALDSESCM(ox)EK_ AGEGTYALDSESCM(1)EK AGEGTYALDSESCM(97.46)EK 0 1 0 B5MCF9;B2RDF2;O00541;B3KXD6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.3654 2 882.358567 1762.70258 65322.71 0.62301 0.00054972 -0.17747 -0.00015659 0.44554 0.00039313 882.358655721437 886.365783338158 37.889 0.41235 37.889 37.683 38.096 3.8147E-06 195 34 8 0 0 0 4.0593E-07 2 19257 97.463 91.027 1 1.239 1.2204 0 19632000 9632600 9999300 1117 886 444 455 1745;1746 1745 698 AGEGTYALDSESCMEK 16 1 0 Oxidation (M) _AGEGTYALDSESCM(ox)EK_ AGEGTYALDSESCM(1)EK AGEGTYALDSESCM(134.56)EK 0 1 0 B5MCF9;B2RDF2;O00541;B3KXD6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.3586 2 882.358567 1762.70258 64785.38 0.65244 0.00057568 0.13806 0.00012182 0.79049 0.0006975 882.860304619733 886.366137687779 36.941 0.41372 36.941 36.77 37.183 0 163 31 7 0 0 0 3.4782E-18 2 19073 134.56 133.31 1 1.2201 1.2373 0 29546000 14255000 15291000 1118 886 444 455 1747;1748 1748 698 AGEGTYALDSESCMEK 16 1 0 Unmodified _AGEGTYALDSESCMEK_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 878.3685 2 874.361109 1746.70767 66678.77 0.41239 0.00036057 -0.30057 -0.00026281 0.11181 9.7767E-05 874.862524475185 878.869104345685 61.852 0.49212 61.852 61.592 62.085 0 165 39 6 0 0 0 0.017273 1 31704 30.059 27.833 1 1.2487 1.0231 0 2470600 1104800 1365800 1119 886 444 456 1749 1749 AGEMELKPFNGEDYTCITFQPDLSK 25 2 0 Oxidation (M) _AGEM(ox)ELKPFNGEDYTCITFQPDLSK_ AGEM(1)ELKPFNGEDYTCITFQPDLSK AGEM(60.52)ELKPFNGEDYTCITFQPDLSK 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 969.7813 3 969.445613 2905.31501 61026.23 0.30255 0.00029331 -0.32556 -0.00031562 -0.023011 -2.2308E-05 969.779689741584 975.123042202493 106.4 0.5863 106.4 106.13 106.71 0 312 42 10 0 0 0 3.2516E-10 3 65961 60.521 60.521 1 0.79987 0.94424 0 61629000 32705000 28923000 1120 1471 445 457 1750;1751;1752 1751 1191 AGEMELKPFNGEDYTCITFQPDLSK 25 2 0 Oxidation (M) _AGEM(ox)ELKPFNGEDYTCITFQPDLSK_ AGEM(1)ELKPFNGEDYTCITFQPDLSK AGEM(70.09)ELKPFNGEDYTCITFQPDLSK 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.123 3 969.445613 2905.31501 60592.26 0.48232 0.00046758 -0.65749 -0.0006374 -0.17517 -0.00016982 969.779169124742 975.12285746158 105.78 0.53968 105.78 105.53 106.07 7.6294E-06 307 40 10 0 0 0 1.5137E-12 1 67239 70.091 70.091 1 0.84909 0.9855 0 92439000 47678000 44762000 1121 1471 445 457 1753 1753 1191 AGEMELKPFNGEDYTCITFQPDLSK 25 2 0 Oxidation (M) _AGEM(ox)ELKPFNGEDYTCITFQPDLSK_ AGEM(1)ELKPFNGEDYTCITFQPDLSK AGEM(96.02)ELKPFNGEDYTCITFQPDLSK 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 975.1233 3 969.445613 2905.31501 60697.23 -0.17125 -0.00016602 0.045273 4.389E-05 -0.12597 -0.00012213 969.780041752848 975.123237939959 117.07 0.55428 117.07 116.84 117.39 7.6294E-06 172 23 10 0 0 0 9.4543E-17 2 68878 96.019 96.019 1 0.93437 0.79219 0 59361000 28793000 30568000 1122 1471 445 457 1754;1755 1755 1191 AGEMELKPFNGEDYTCITFQPDLSK 25 2 0 Oxidation (M) _AGEM(ox)ELKPFNGEDYTCITFQPDLSK_ AGEM(1)ELKPFNGEDYTCITFQPDLSK AGEM(43.09)ELKPFNGEDYTCITFQPDLSK 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 975.1232 3 969.445613 2905.31501 61013.81 0.16142 0.00015649 -0.35948 -0.0003485 -0.19805 -0.000192 969.779764911317 975.122997587974 116.91 0.56226 116.91 116.68 117.24 7.6294E-06 211 25 12 0 0 0 2.8535E-06 1 67808 43.091 43.091 1 0.95722 0.81656 0 55806000 27603000 28204000 1123 1471 445 457 1756 1756 1191 AGEMELKPFNGEDYTCITFQPDLSK 25 2 0 Unmodified _AGEMELKPFNGEDYTCITFQPDLSK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 964.4476 3 964.113975 2889.3201 61544.38 0.24462 0.00023584 0.48559 0.00046816 0.7302 0.000704 964.447560733603 970.126341760441 122.26 0.37501 122.26 122.05 122.43 -7.6294E-06 118 17 11 0 0 0 0.037337 2 72885 16.798 16.798 1 1.6392 1.3964 0 23603000 9033700 14569000 1124 1471 445 458 1757;1758 1758 AGEMELKPFNGEDYTCITFQPDLSK 25 2 0 Unmodified _AGEMELKPFNGEDYTCITFQPDLSK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 969.7925 3 964.113975 2889.3201 60167.21 0.38475 0.00037094 -0.038678 -3.729E-05 0.34607 0.00033365 964.781541947946 969.790455228388 122.09 0.43332 122.09 121.91 122.34 0 136 21 11 0 0 0 3.8811E-10 2 71826 61.109 54.948 1 1.3583 1.1546 0 30493000 11491000 19003000 1125 1471 445 458 1759;1760 1759 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 1 Unmodified _AGEPNSPDAEEANSPDVTAGCDPAGVHPPR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1006.1141 3 1005.44421 3013.31081 61777 0.6793 0.000683 -0.075213 -7.5622E-05 0.60409 0.00060738 1005.77852457544 1009.11463924459 60.455 0.66389 60.455 60.12 60.784 0 244 60 6 0 0 0 2.313E-11 4 34546 57.845 57.845 1 1.6654 1.7236 0 23225000 10445000 12780000 1126 1694 446 459 1761;1762;1763;1764 1763 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 1 Unmodified _AGEPNSPDAEEANSPDVTAGCDPAGVHPPR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1009.4494 3 1005.44421 3013.31081 61737.52 0.43562 0.00043799 -0.020316 -2.0427E-05 0.4153 0.00041756 1005.77866141764 1008.78053033092 59.543 0.63376 59.543 59.194 59.828 -3.8147E-06 308 57 8 0 0 0 2.3196E-07 2 34511 44.164 44.164 1 1.5224 1.6661 0 33509000 11632000 21876000 1127 1694 446 459 1765;1766 1765 AGEQLAPFLPQLVPR 15 0 1 Unmodified _AGEQLAPFLPQLVPR_ 0 0 0 B3KXF2;J3KN16;Q5VYK3 B3KXF2 B3KXF2 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.47 2 818.46449 1634.91443 69586.45 0.86045 0.00070425 0.1449 0.00011859 1.0053 0.00082284 818.464963752827 823.468479309904 123.56 0.41373 123.56 123.34 123.75 7.6294E-06 103 29 5 0 0 0 0.0044679 2 80016 39.785 39.785 1 2.4308 2.5277 0 5418500 1635700 3782800 1128 952 447 460 1767;1768 1767 AGEQLAPFLPQLVPR 15 0 1 Unmodified _AGEQLAPFLPQLVPR_ 0 0 0 B3KXF2;J3KN16;Q5VYK3 B3KXF2 B3KXF2 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.4657 2 818.46449 1634.91443 69345.03 1.2206 0.00099904 -0.26122 -0.0002138 0.9594 0.00078523 818.464428195859 823.468154142729 123.07 0.45438 123.07 122.88 123.34 0 115 33 5 0 0 0 0.010695 1 81718 46.706 46.706 1 2.5116 2.5077 0 7003100 2593500 4409600 1129 952 447 460 1769 1769 AGEVFIHK 8 1 0 Unmodified _AGEVFIHK_ 0 0 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367;C9IZL7;C9JYS8;A0A0S2Z4E7 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.7582 2 450.750527 899.486502 88459.84 -0.032848 -1.4806E-05 0.65442 0.00029498 0.62157 0.00028017 450.750994593404 454.757790440048 26.701 0.67787 26.701 26.37 27.048 1.9073E-06 188 41 8 0 0 0 0.0031191 2 11991 97.798 61.403 1 1.3597 1.5999 0 319010000 135830000 183170000 1130 573 448 461 1770;1771 1770 AGEVFIHK 8 1 0 Unmodified _AGEVFIHK_ 0 0 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367;C9IZL7;C9JYS8;A0A0S2Z4E7 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.7575 2 450.750527 899.486502 88494.78 0.26028 0.00011732 1.1842 0.00053379 1.4445 0.00065111 450.751617301559 454.757801903212 26.134 0.54001 26.134 25.893 26.433 1.9073E-06 130 29 8 0 0 0 0.0027401 2 11549 98.997 60.205 1 1.4408 1.6653 0 198270000 82767000 115500000 1131 573 448 461 1772;1773 1772 AGEVFIHK 8 1 0 Unmodified _AGEVFIHK_ 0 0 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367;C9IZL7;C9JYS8;A0A0S2Z4E7 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 454.7575 2 450.750527 899.486502 89692.54 -0.010162 -4.5805E-06 0.53303 0.00024026 0.52286 0.00023568 450.751015546718 454.757721079514 29.21 0.62184 29.21 29.021 29.643 0 167 44 6 0 0 0 0.0077064 2 11818 81.784 54.822 1 1.0843 0.85437 0 10922000 4995400 5926800 1132 573 448 461 1774;1775 1774 AGEVFIHK 8 1 0 Unmodified _AGEVFIHK_ 0 0 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367;C9IZL7;C9JYS8;A0A0S2Z4E7 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 454.7576 2 450.750527 899.486502 89501.18 -0.30602 -0.00013794 0.96096 0.00043315 0.65494 0.00029521 450.751138489287 454.757763712223 29.263 0.62654 29.263 28.97 29.596 0 164 36 6 0 0 0 0.012693 1 11302 67.032 50.105 1 1.1176 0.91806 0 9501800 4785100 4716700 1133 573 448 461 1776 1776 AGFAGDDAPR 10 0 1 Unmodified _AGFAGDDAPR_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;POTEM;POTEJ;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7285 2 488.727781 975.441008 85465.98 0.30723 0.00015015 -0.87981 -0.00042999 -0.57258 -0.00027983 488.728488819924 493.731385239229 26.398 1.3214 26.398 26.145 27.467 0 494 78 13 0 0 0 1.9346E-09 3 11738 129.72 109.16 1 1.9078 2.2757 0 3020900000 1052900000 1968000000 1134 1624;1656;1100 449 462 1777;1778;1779 1778 AGFAGDDAPR 10 0 1 Unmodified _AGFAGDDAPR_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;POTEM;POTEJ;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.7288 2 488.727781 975.441008 85928.3 0.42415 0.00020729 -0.82573 -0.00040356 -0.40158 -0.00019626 488.728825592126 493.73151921603 26.073 1.2104 26.073 25.877 27.087 -1.9073E-06 385 62 14 0 0 0 1.2779E-30 2 11472 184.38 151.77 1 1.7767 2.1313 0 4806300000 1669900000 3136400000 1135 1624;1656;1100 449 462 1780;1781 1781 AGFAGDDAPR 10 0 1 Unmodified _AGFAGDDAPR_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;POTEM;POTEJ;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.7279 2 488.727781 975.441008 85366.95 0.045356 2.2167E-05 -0.60737 -0.00029684 -0.56201 -0.00027467 488.728215683746 493.731550853949 29.513 1.5038 29.513 29.156 30.659 0 560 103 10 0 0 0 0.00083563 3 11921 80.455 68.944 1 2.4827 2.1604 0 317710000 90361000 227350000 1136 1624;1656;1100 449 462 1782;1783;1784 1783 AGFAGDDAPR 10 0 1 Unmodified _AGFAGDDAPR_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;POTEM;POTEJ;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.7318 2 488.727781 975.441008 85043.5 -0.13803 -6.7457E-05 -0.64185 -0.00031369 -0.77988 -0.00038115 488.728283119733 493.731512827479 29.681 1.4999 29.681 29.29 30.79 1.9073E-06 473 91 10 0 0 0 0.0027842 3 11495 67.507 58.091 1 2.4905 2.1764 0 357730000 103220000 254510000 1137 1624;1656;1100 449 462 1785;1786;1787 1785 AGFDSDYDQALADIR 15 0 1 Unmodified _AGFDSDYDQALADIR_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.3839 2 828.878641 1655.74273 70634.7 0.75406 0.00062503 0.5146 0.00042654 1.2687 0.0010516 829.380511526691 833.883205997864 99.98 0.47238 99.98 99.706 100.18 -7.6294E-06 131 40 4 0 0 0 0.00022118 1 61211 65.563 58.182 1 1.0302 1.0753 0 13285000 5506700 7778300 1138 1601 450 463 1788 1788 AGFDSDYDQALADIR 15 0 1 Unmodified _AGFDSDYDQALADIR_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.8839 2 828.878641 1655.74273 69939.35 0.84222 0.0006981 0.1168 9.6813E-05 0.95902 0.00079491 828.878782407367 833.883049264804 99.362 0.52455 99.362 99.084 99.609 0 134 43 4 0 0 0 2.621E-10 1 62271 118.48 108.25 1 0.99228 0.99715 0 9261600 3849900 5411700 1139 1601 450 463 1789 1789 AGFFLPPDEYVVTDPEQEK 19 1 0 Unmodified _AGFFLPPDEYVVTDPEQEK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1095.5333 2 1091.02296 2180.03137 58133.43 0.19623 0.00021409 0.068784 7.5045E-05 0.26501 0.00028914 1091.52435548541 1095.53106327443 116.08 0.4585 116.08 115.87 116.33 0 93 27 5 0 0 0 0.0393 1 74041 22.055 19.269 1 0.7547 0.7415 0 8728700 4852000 3876700 1140 1738 451 464 1790 1790 AGFIQDTSLILYEEVKPNLTER 22 1 1 Unmodified _AGFIQDTSLILYEEVKPNLTER_ 0 0 1 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 852.1226 3 846.114633 2535.32207 65496.64 0.98784 0.00083582 0.18487 0.00015642 1.1727 0.00099225 846.448980405588 852.456640255442 133.24 0.41315 133.24 133.08 133.49 0 115 18 10 0 0 0 4.2533E-12 2 81126 97.488 97.488 1 1.0218 0.88243 0 13546000 6089300 7456700 1141 1954 452 465 1791;1792 1791 AGFIQDTSLILYEEVKPNLTER 22 1 1 Unmodified _AGFIQDTSLILYEEVKPNLTER_ 0 0 1 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 846.4504 3 846.114633 2535.32207 64760.96 1.1487 0.00097192 -0.28054 -0.00023737 0.86815 0.00073455 846.448978723923 852.456794932401 132.99 0.32407 132.99 132.81 133.13 0 81 15 8 0 0 0 2.0076E-08 2 80066 69.922 66.46 1 0.92477 0.7818 0 9911300 5642400 4268900 1142 1954 452 465 1793;1794 1794 AGFVPVYLR 9 0 1 Unmodified _AGFVPVYLR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.2948 2 511.295102 1020.57565 84404.55 0.5209 0.00026633 -0.35579 -0.00018191 0.16511 8.4422E-05 511.294800497203 516.299071775318 106.34 1.0105 106.34 105.8 106.81 -7.6294E-06 227 54 7 0 0 0 0.0042156 3 60709 81.297 39.795 1 1.4324 1.2253 0 39613000 16105000 23508000 1143 2023 453 466 1795;1796;1797 1797 AGFVPVYLR 9 0 1 Unmodified _AGFVPVYLR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.2992 2 511.295102 1020.57565 83552.9 0.44279 0.0002264 0.33218 0.00016984 0.77497 0.00039624 511.294816304409 516.299203073411 106.09 0.93414 106.09 105.56 106.49 0 268 57 9 0 0 0 0.034102 2 59619 50.632 22.209 1 1.4371 1.2536 0 33356000 13582000 19775000 1144 2023 453 466 1798;1799 1798 AGGAAVVITEPEHTK 15 1 0 Unmodified _AGGAAVVITEPEHTK_ 0 0 0 A5PLK7;A0A024RAC5;Q9P258 A5PLK7 A5PLK7 RCC2 Protein RCC2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.4023 2 740.39373 1478.77291 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.855 1 38.855 38.355 39.355 -3.8147E-06 0 0 0 0.0014069 1 20032 72.2 53.933 1 1145 301 454 467 1800 1800 AGGAAVVITEPEHTK 15 1 0 Unmodified _AGGAAVVITEPEHTK_ 0 0 0 A5PLK7;A0A024RAC5;Q9P258 A5PLK7 A5PLK7 RCC2 Protein RCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.3938 2 740.39373 1478.77291 71562.74 0.41845 0.00030982 0.22396 0.00016582 0.6424 0.00047563 740.394030685133 744.400872278491 37.669 0.23471 37.669 37.561 37.795 0 62 17 6 0 0 0 5.2506E-07 1 19598 101.95 95.714 1 1.0909 1.1002 0 16232000 7685400 8547000 1146 301 454 467 1801 1801 AGGADAVQTVTGGLR 15 0 1 Unmodified _AGGADAVQTVTGGLR_ 0 0 0 A8K9B9;A0A024R9N6;Q9H223 A8K9B9 A8K9B9 EHD4 EH domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.8691 2 686.862597 1371.71064 71636.45 0.45786 0.00031449 0.87647 0.00060201 1.3343 0.0009165 686.862882070411 691.867822193578 67.329 0.65446 67.329 66.951 67.606 0 134 51 5 0 0 0 0.00022638 1 38981 73.632 73.632 1 1.2276 1.2543 0 14627000 6614800 8011800 1147 284 455 468 1802 1802 AGGADAVQTVTGGLR 15 0 1 Unmodified _AGGADAVQTVTGGLR_ 0 0 0 A8K9B9;A0A024R9N6;Q9H223 A8K9B9 A8K9B9 EHD4 EH domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.8675 2 686.862597 1371.71064 74841.43 0.50002 0.00034344 0.48995 0.00033653 0.98997 0.00067997 686.862443828095 691.867240564134 66.204 0.37559 66.204 66.012 66.388 0 94 30 4 0 0 0 5.9351E-07 1 39135 100.55 88.84 1 0.93718 0.92661 0 15202000 7738000 7464000 1148 284 455 468 1803 1803 AGGASPAASSTAQPPTQHR 19 0 1 Unmodified _AGGASPAASSTAQPPTQHR_ 0 0 0 B2RCD8;Q8IU81 B2RCD8 B2RCD8 IRF2BP1 Interferon regulatory factor 2-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.2997 3 597.962601 1790.86597 88279.85 0.66357 0.00039679 -0.709 -0.00042396 -0.04543 -2.7165E-05 598.295251742509 601.298717022618 18.186 0.23254 18.186 18.099 18.332 0 38 15 4 0 0 0 0.013573 1 5195 21.667 17.764 1 1.5339 1.6483 0 3304100 985000 2319200 1149 882 456 469 1804 1804 AGGASPAASSTAQPPTQHR 19 0 1 Unmodified _AGGASPAASSTAQPPTQHR_ 0 0 0 B2RCD8;Q8IU81 B2RCD8 B2RCD8 IRF2BP1 Interferon regulatory factor 2-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.2958 3 597.962601 1790.86597 83730.25 0.40932 0.00024476 -0.74808 -0.00044732 -0.33876 -0.00020256 597.96259422301 601.632038287479 18.241 0.20952 18.241 18.137 18.346 0 34 10 6 0 0 0 0.03861 1 4993 15.09 15.09 1 1.4488 1.5155 0 4274600 2269500 2005000 1150 882 456 469 1805 1805 AGGDAEPRPAEPPAWAGGAR 20 0 2 Unmodified _AGGDAEPRPAEPPAWAGGAR_ 0 0 1 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.3164 3 644.981884 1931.92382 74766.71 0.632 0.00040763 -0.05474 -3.5306E-05 0.57726 0.00037232 644.982208536574 651.988201051381 58.496 0.50838 58.496 58.245 58.754 -3.8147E-06 120 37 5 0 0 0 9.3969E-05 2 29740 28.891 25.287 1 3.3561 2.9943 0 3702500 776860 2925600 1151 1972 457 470 1806;1807 1806 AGGEAGVTLGQPHLSR 16 0 1 Acetyl (Protein N-term) _(ac)AGGEAGVTLGQPHLSR_ 1 0 0 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.4162 2 796.412985 1590.81142 69359.38 0.52211 0.00041582 -0.03141 -2.5015E-05 0.4907 0.0003908 796.412737433637 801.41711252735 71.25 0.64114 71.25 70.93 71.571 0 196 46 7 0 0 0 3.573E-12 4 42579 121.04 114.07 1 1.881 2.0345 0 27026000 10182000 16843000 1152 1559 458 471 1808;1809;1810;1811 1809 AGGEAGVTLGQPHLSR 16 0 1 Acetyl (Protein N-term) _(ac)AGGEAGVTLGQPHLSR_ 1 0 0 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 801.4173 2 796.412985 1590.81142 68536.86 0.54818 0.00043658 -0.10492 -8.3561E-05 0.44326 0.00035301 796.412932336605 801.416598121164 82.66 0.65321 82.66 82.316 82.969 0 229 37 8 0 0 0 3.2655E-08 2 44962 101.6 101.6 1 1.157 0.99512 0 7650900 3567100 4083800 1153 1559 458 471 1812;1813 1812 AGGEAGVTLGQPHLSR 16 0 1 Acetyl (Protein N-term) _(ac)AGGEAGVTLGQPHLSR_ 1 0 0 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 796.9141 2 796.412985 1590.81142 68489.53 0.56128 0.00044701 -0.20395 -0.00016243 0.35733 0.00028458 796.412635726376 801.416543945934 82.882 0.58485 82.882 82.579 83.164 0 212 33 8 0 0 0 0.00025948 2 44229 71.548 71.548 1 1.1394 0.94959 0 6373800 2966600 3407100 1154 1559 458 471 1814;1815 1815 AGGPEGPPWLPR 12 0 1 Unmodified _AGGPEGPPWLPR_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.3266 2 617.32238 1232.63021 80814.07 0.75974 0.000469 -0.52902 -0.00032658 0.23071 0.00014242 617.321471256244 622.326427319021 85.196 0.65237 85.196 84.827 85.48 0 117 53 4 0 0 0 0.0045039 1 51065 53.327 53.327 1 2.3458 2.414 0 10176000 3137600 7038900 1155 161 459 472 1816 1816 AGGPPQVAGAQAACSEDR 18 0 1 Unmodified _AGGPPQVAGAQAACSEDR_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5;D6RBJ6 B3KVZ3 B3KVZ3 CENPH Centromere protein H ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.4002 2 871.399749 1740.78495 NaN NaN NaN 0.56127 0.00048909 NaN NaN NaN NaN 34.072 0.27919 34.072 33.956 34.235 0 0 0 0 0.00049468 1 16964 59.227 52.844 1 NaN NaN 0 4049300 4049300 0 1156 585 460 473 1817 1817 AGGPPQVAGAQAACSEDR 18 0 1 Unmodified _AGGPPQVAGAQAACSEDR_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5;D6RBJ6 B3KVZ3 B3KVZ3 CENPH Centromere protein H MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.9026 2 871.399749 1740.78495 66802.37 0.20161 0.00017569 0.1784 0.00015546 0.38001 0.00033114 871.400267735732 876.404026027379 33.383 0.2862 33.383 33.253 33.54 0 89 24 5 0 0 0 7.2719E-05 2 16685 51.135 47.947 1 0.99388 0.98839 0 7665600 3461500 4204200 1157 585 460 473 1818;1819 1819 AGGPPQVAGAQAACSEDR 18 0 1 Unmodified _AGGPPQVAGAQAACSEDR_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5;D6RBJ6 B3KVZ3 B3KVZ3 CENPH Centromere protein H MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 871.3993 2 871.399749 1740.78495 65805.23 0.2375 0.00020696 0.13179 0.00011484 0.36928 0.00032179 871.90228719982 876.40387171204 39.434 0.41307 39.434 39.218 39.631 0 141 31 6 0 0 0 0.00093602 1 17979 39.006 39.006 1 1.3761 1.1597 0 3045500 1312200 1733300 1158 585 460 473 1820 1820 AGGPPQVAGAQAACSEDR 18 0 1 Unmodified _AGGPPQVAGAQAACSEDR_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5;D6RBJ6 B3KVZ3 B3KVZ3 CENPH Centromere protein H MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 871.4001 2 871.399749 1740.78495 66688.21 0.04243 3.6974E-05 0.59557 0.00051898 0.638 0.00055595 871.400204298608 876.404560425529 39.687 0.41317 39.687 39.463 39.876 0 156 32 6 0 0 0 0.00064593 2 17657 42.568 42.568 1 1.283 1.1223 0 2556500 1036000 1520400 1159 585 460 473 1821;1822 1822 AGGPTTPLSPTR 12 0 1 Unmodified _AGGPTTPLSPTR_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.8166 2 577.811845 1153.60914 79203.34 0.74764 0.00043199 0.58099 0.0003357 1.3286 0.00076769 577.81185008121 582.815899633454 38.607 0.58455 38.607 38.369 38.953 0 245 47 7 0 0 0 0.013922 2 19789 43.958 31.722 1 1.241 1.3803 0 76047000 34809000 41238000 1160 1502 461 474 1823;1824 1823 AGGPTTPLSPTR 12 0 1 Unmodified _AGGPTTPLSPTR_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.8118 2 577.811845 1153.60914 80238.28 0.39254 0.00022681 0.016147 9.3299E-06 0.40869 0.00023614 577.811740223862 582.815909128387 37.694 0.53599 37.694 37.481 38.017 0 207 40 8 0 0 0 0.00019062 2 19596 76.85 55 1 1.3882 1.5888 0 86262000 32371000 53891000 1161 1502 461 474 1825;1826 1826 AGGVGLNLSAASR 13 0 1 Unmodified _AGGVGLNLSAASR_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;H7C5K0 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.8223 2 586.822744 1171.63093 79987.04 0.45107 0.0002647 -0.52471 -0.00030791 -0.073642 -4.3215E-05 586.822473480138 591.826949914971 61.417 0.47328 61.417 61.235 61.708 0 128 37 5 0 0 0 0.00036937 1 35100 62.271 52.757 1 0.43204 0.43939 0 27492000 19582000 7910900 1162 512 462 475 1827 1827 AGGVGLNLSAASR 13 0 1 Unmodified _AGGVGLNLSAASR_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;H7C5K0 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.8268 2 586.822744 1171.63093 80130.41 0.42182 0.00024754 0.016462 9.6601E-06 0.43829 0.0002572 586.822738098422 591.827273481854 60.156 0.44346 60.156 59.984 60.428 -3.8147E-06 119 25 7 0 0 0 0.00021471 1 35048 69.786 59.555 1 0.47359 0.49435 0 22451000 14455000 7996400 1163 512 462 475 1828 1828 AGGVGLNLSAASR 13 0 1 Unmodified _AGGVGLNLSAASR_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;H7C5K0 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 591.8269 2 586.822744 1171.63093 80574.63 0.22411 0.00013151 0.43308 0.00025414 0.65718 0.00038565 586.823088731447 591.827015897872 70.818 0.30087 70.818 70.703 71.004 0 75 18 6 0 0 0 0.014278 1 37220 37.343 37.343 1 0.77813 0.65263 0 4136800 1998200 2138500 1164 512 462 475 1829 1829 AGIFQPHVR 9 0 1 Unmodified _AGIFQPHVR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 345.1965 3 342.194409 1023.5614 103828.8 -0.25556 -8.7452E-05 0.3807 0.00013027 0.12513 4.282E-05 342.194506332422 345.53059706384 38.733 0.48709 38.733 38.421 38.908 0 119 29 6 0 0 0 0.010456 2 20353 38.086 22.424 1 1.3056 1.4263 0 37391000 15224000 22167000 1165 39 463 476 1830;1831 1830 AGIIASAR 8 0 1 Unmodified _AGIIASAR_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.7293 2 379.729595 757.444637 96512.3 0.26779 0.00010169 -0.027731 -1.053E-05 0.24006 9.1157E-05 379.729480718536 384.73366392393 28.202 0.77885 28.202 27.72 28.498 0 169 53 5 0 0 0 0.0087497 2 13246 77.282 28.522 1 3.5049 3.8977 0 75662000 19225000 56437000 1166 1478 464 477 1832;1833 1833 AGIIASAR 8 0 1 Unmodified _AGIIASAR_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.7291 2 379.729595 757.444637 98028.75 -0.12133 -4.6071E-05 -0.22168 -8.418E-05 -0.34301 -0.00013025 379.729389719283 384.733591579259 27.64 0.65945 27.64 27.32 27.98 1.9073E-06 112 35 6 0 0 0 0.0015907 2 12895 107.59 25.331 1 3.6233 4.1265 0 107180000 23191000 83990000 1167 1478 464 477 1834;1835 1835 AGILTTLNAR 10 0 1 Unmodified _AGILTTLNAR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.3101 2 515.306198 1028.59784 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.461 1 72.461 71.961 72.961 -7.6294E-06 0 0 0 0.050077 1 42413 44.349 18.455 1 1168 560 465 478 1836 1836 AGILTTLNAR 10 0 1 Unmodified _AGILTTLNAR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.3101 2 515.306198 1028.59784 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.15 1 71.15 70.65 71.65 0 0 0 0 0.00016629 1 42601 80.165 28.43 1 1169 560 465 478 1837 1837 AGILTTLNAR 10 0 1 Unmodified _AGILTTLNAR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.3063 2 515.306198 1028.59784 85139.94 0.26505 0.00013658 -0.37841 -0.000195 -0.11336 -5.8417E-05 515.306030459586 520.310218922861 82.872 0.60405 82.872 82.541 83.145 0 145 35 6 0 0 0 0.031278 1 44258 42.287 13.138 1 0.84437 0.73284 0 4308800 2438800 1870000 1170 560 465 478 1838 1838 AGITTIEAVK 10 1 0 Acetyl (Protein N-term) _(ac)AGITTIEAVK_ 1 0 0 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;Q8NAG3;B4DWT5;Q5VU61;A0A087WWU8;D6R904;D6RFM2 Q5HYB6 Q5HYB6 DKFZp686J1372;TPM3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1052.6096 1 1044.59355 1043.58628 NaN NaN NaN -0.1806 -0.00018865 NaN NaN NaN NaN 97.207 0.62454 97.207 96.786 97.41 7.6294E-06 0 0 0 0.0011026 1 60844 74.127 42.193 1 NaN NaN 0 5243600 0 5243600 1171 562 466 479 1839 1839 AGITTTLNSR 10 0 1 Unmodified _AGITTTLNSR_ 0 0 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B3KVF0;B4DVK5;Q59F49 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.2871 2 517.285463 1032.55637 87155.63 0.72201 0.00037349 0.17892 9.255E-05 0.90093 0.00046604 517.286035392796 522.28910725825 38.835 0.64285 38.835 38.483 39.126 0 151 53 5 0 0 0 0.0078188 1 19979 56.916 43.873 1 0.84312 0.8586 0 18555000 9938800 8616200 1172 745 467 480 1840 1840 AGLAYHLR 8 0 1 Unmodified _AGLAYHLR_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.7564 2 450.756144 899.497735 NaN NaN NaN -0.24842 -0.00011198 NaN NaN NaN NaN 35.549 0.752 35.549 35.272 36.024 -3.8147E-06 0 0 0 0.011428 1 17894 75.269 34.147 1 NaN NaN 0 32450000 32450000 0 1173 1275 468 481 1841 1841 AGLAYHLR 8 0 1 Unmodified _AGLAYHLR_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.7559 2 450.756144 899.497735 88852.14 0.61335 0.00027647 0.14978 6.7515E-05 0.76313 0.00034398 450.756174304591 455.760101288268 34.295 0.29168 34.295 34.117 34.409 0 50 18 4 0 0 0 0.0041107 2 17376 107.74 48.104 1 0.55101 0.6067 0 41036000 26449000 14587000 1174 1275 468 481 1842;1843 1843 AGLAYHLR 8 0 1 Unmodified _AGLAYHLR_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 300.8402 3 300.839855 899.497735 108891.3 0.82509 0.00024822 -0.045876 -1.3801E-05 0.77922 0.00023442 300.839701991455 304.175931247945 34.306 0.17667 34.306 34.2 34.376 0 39 10 5 0 0 0 0.01116 1 17362 48.756 9.9372 1 0.39983 0.4006 0 18422000 12658000 5763600 1175 1275 468 481 1844 1844 AGLAYHLR 8 0 1 Unmodified _AGLAYHLR_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 455.7602 2 450.756144 899.497735 90419.9 -0.043983 -1.9825E-05 0.21939 9.8892E-05 0.17541 7.9067E-05 450.756015448506 455.760186983151 40.155 0.53937 40.155 39.912 40.451 -3.8147E-06 131 40 5 0 0 0 0.051711 1 18436 43.124 19.151 1 0.72505 0.61191 0 4772300 2797500 1974800 1176 1275 468 481 1845 1845 AGLAYHLR 8 0 1 Unmodified _AGLAYHLR_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 455.7604 2 450.756144 899.497735 89153.29 -0.17198 -7.7523E-05 0.73305 0.00033043 0.56107 0.0002529 450.7562342015 455.76034425271 40.007 0.4884 40.007 39.836 40.324 -3.8147E-06 150 41 6 0 0 0 0.034605 2 17852 49.358 26.339 1 0.85377 0.71061 0 6183900 3339700 2844200 1177 1275 468 481 1846;1847 1847 AGLESGAEPGDGDSDTTK 18 1 0 Unmodified _AGLESGAEPGDGDSDTTK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.874 2 853.87121 1705.72787 65671.51 0.42294 0.00036113 0.011707 9.9964E-06 0.43464 0.00037113 853.871233750842 857.878246108022 27.074 0.46412 27.074 26.893 27.357 1.9073E-06 153 23 11 0 0 0 8.6281E-40 2 12277 160.18 154.18 1 0.90099 0.98357 0 50556000 26510000 24046000 1178 1398 469 482 1848;1849 1849 AGLESGAEPGDGDSDTTK 18 1 0 Unmodified _AGLESGAEPGDGDSDTTK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 853.8719 2 853.87121 1705.72787 65849.62 0.80039 0.00068343 -0.25738 -0.00021977 0.54301 0.00046366 853.871026284432 857.878093261042 26.713 0.40152 26.713 26.503 26.905 0 135 19 10 0 0 0 4.368E-22 2 11976 126.1 117.09 1 0.94333 1.0546 0 104760000 53058000 51701000 1179 1398 469 482 1850;1851 1850 AGLESGAEPGDGDSDTTK 18 1 0 Unmodified _AGLESGAEPGDGDSDTTK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 857.8777 2 853.87121 1705.72787 65718.28 0.50807 0.00043382 0.12758 0.00010894 0.63565 0.00054276 853.871315154891 857.878401558906 30.998 0.53343 30.998 30.75 31.283 1.9073E-06 196 31 9 0 0 0 2.2496E-05 2 12888 71.176 71.176 1 0.80724 0.63804 0 18171000 10107000 8064500 1180 1398 469 482 1852;1853 1853 AGLESGAEPGDGDSDTTK 18 1 0 Unmodified _AGLESGAEPGDGDSDTTK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 857.8788 2 853.87121 1705.72787 66166.48 0.55531 0.00047416 -0.040723 -3.4772E-05 0.51458 0.00043939 853.871168046061 857.878282388439 31.273 0.69811 31.273 31.021 31.719 0 210 36 9 0 0 0 8.7008E-23 1 12653 135.58 135.58 1 0.77399 0.61985 0 20459000 11490000 8969600 1181 1398 469 482 1854 1854 AGLESGAEPGDGDSDTTKK 19 2 0 Unmodified _AGLESGAEPGDGDSDTTKK_ 0 0 1 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.9584 3 612.281553 1833.82283 77662.68 0.13822 8.4629E-05 -0.53519 -0.00032769 -0.39697 -0.00024306 612.281144175635 617.958309594331 22.533 0.33297 22.533 22.361 22.694 0 58 13 6 0 0 0 0.0020929 2 7287 17.72 13.618 1 0.74869 0.65634 0 2851700 1320300 1531400 1182 1398 470 483 1855;1856 1856 AGLGSGLSLSGLVHPELSR 19 0 1 Unmodified _AGLGSGLSLSGLVHPELSR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;G3V1M7 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.6794 3 617.34253 1849.00576 77678.05 1.075 0.00066363 0.047908 2.9576E-05 1.1229 0.00069321 617.342620231772 620.678827830141 108.68 0.54262 108.68 108.41 108.95 0 205 37 8 0 0 0 9.7128E-06 2 67807 55.383 55.383 1 1.2958 1.3734 0 41644000 18440000 23204000 1183 965 471 484 1857;1858 1858 AGLGSGLSLSGLVHPELSR 19 0 1 Unmodified _AGLGSGLSLSGLVHPELSR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;G3V1M7 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.6765 3 617.34253 1849.00576 77858.92 0.58138 0.00035891 -0.098605 -6.0873E-05 0.48277 0.00029804 617.342495591777 620.678597652926 107.9 0.55669 107.9 107.64 108.2 -7.6294E-06 231 39 8 0 0 0 2.5849E-06 2 68849 75.55 75.55 1 1.2948 1.418 0 31064000 13906000 17158000 1184 965 471 484 1859;1860 1860 AGLGSGLSLSGLVHPELSR 19 0 1 Unmodified _AGLGSGLSLSGLVHPELSR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;G3V1M7 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.3426 3 617.34253 1849.00576 77138.58 0.80077 0.00049435 -0.97946 -0.00060466 -0.17869 -0.00011031 617.341839902558 621.012550899423 119.52 0.33457 119.52 119.31 119.65 0 50 12 8 0 0 0 1.2885E-05 2 70726 49.655 48.315 1 0.6268 0.53516 0 8837100 5596200 3240900 1185 965 471 484 1861;1862 1861 AGLGSGLSLSGLVHPELSR 19 0 1 Unmodified _AGLGSGLSLSGLVHPELSR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;G3V1M7 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.6768 3 617.34253 1849.00576 78934.71 0.56315 0.00034766 -0.89312 -0.00055136 -0.32997 -0.00020371 617.676021724108 620.677841281283 119.24 0.32969 119.24 119.06 119.39 -7.6294E-06 71 13 8 0 0 0 1.2205E-05 3 69624 50.883 45.369 1 0.5901 0.48213 0 9245400 6059000 3186400 1186 965 471 484 1863;1864;1865 1864 AGLLHNILPSQSTDLHHSVGTELLSLVYK 29 1 0 Unmodified _AGLLHNILPSQSTDLHHSVGTELLSLVYK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 786.9296 4 786.427839 3141.68225 67526.87 0.62926 0.00049487 0.016162 1.271E-05 0.64542 0.00050758 786.928736594062 788.933197323382 130.97 0.59489 130.97 130.75 131.34 0 178 25 11 0 0 0 0.0017384 1 79418 28.742 28.742 1 0.29133 0.23615 0 25076000 18692000 6384000 1187 1665 472 485 1866 1866 AGLLQNNLEEGNDLK 15 1 0 Unmodified _AGLLQNNLEEGNDLK_ 0 0 0 Q9Y4A0 Q9Y4A0 Q9Y4A0 JRKL Jerky protein homolog-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 818.4255 2 814.417933 1626.82131 69041.55 0.70103 0.00057093 -0.21519 -0.00017525 0.48584 0.00039567 814.417986593804 818.425075898922 89.475 0.36111 89.475 89.306 89.668 0 111 23 6 0 0 0 0.0071305 1 49452 45.915 45.915 1 1.5454 1.2157 0 3118500 1335400 1783200 1188 2144 473 486 1867 1867 AGLLQNNLEEGNDLK 15 1 0 Unmodified _AGLLQNNLEEGNDLK_ 0 0 0 Q9Y4A0 Q9Y4A0 Q9Y4A0 JRKL Jerky protein homolog-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.4246 2 814.417933 1626.82131 68919.28 0.41738 0.00033992 0.095268 7.7588E-05 0.51264 0.00041751 814.417996144908 818.425159505678 89.469 0.40527 89.469 89.258 89.663 0 104 25 6 0 0 0 0.0040845 2 48639 52.693 52.693 1 1.3406 1.0824 0 2550100 1030700 1519300 1189 2144 473 486 1868;1869 1868 AGLLQVYIHTQK 12 1 0 Unmodified _AGLLQVYIHTQK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65;A0A087WVM7;A0A0U3B3H7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.9023 2 685.893169 1369.77178 75960.68 0.68657 0.00047091 0.2306 0.00015817 0.91717 0.00062908 685.893104526283 689.900339320911 75.735 0.41798 75.735 75.568 75.986 0 138 36 5 0 0 0 0.00019951 2 44659 78.655 78.655 1 1.1489 1.127 0 22734000 8679000 14055000 1190 759 474 487 1870;1871 1871 AGLLQVYIHTQK 12 1 0 Unmodified _AGLLQVYIHTQK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65;A0A087WVM7;A0A0U3B3H7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.2693 3 457.597871 1369.77178 89378.61 0.21841 9.9946E-05 0.10492 4.8009E-05 0.32333 0.00014796 457.597886075116 460.269276967043 74.061 0.75971 74.061 73.657 74.417 0 372 62 8 0 0 0 0.0070834 1 44332 27.967 27.967 1 1.1623 1.3113 0 63466000 28520000 34946000 1191 759 474 487 1872 1872 AGLLQVYIHTQK 12 1 0 Unmodified _AGLLQVYIHTQK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65;A0A087WVM7;A0A0U3B3H7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.8934 2 685.893169 1369.77178 76593.84 0.57686 0.00039566 -0.3455 -0.00023698 0.23136 0.00015869 685.892977506566 689.900238574829 74.066 0.56161 74.066 73.763 74.325 0 195 46 6 0 0 0 0.00022526 2 44550 83.883 83.883 1 1.1836 1.1815 0 14380000 5966800 8413700 1192 759 474 487 1873;1874 1874 AGLLQVYIHTQK 12 1 0 Unmodified _AGLLQVYIHTQK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65;A0A087WVM7;A0A0U3B3H7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.2693 3 457.597871 1369.77178 87895.37 0.21596 9.8821E-05 0.0094112 4.3065E-06 0.22537 0.00010313 457.597925087791 460.269216219087 85.864 0.64546 85.864 85.65 86.295 0 239 43 10 0 0 0 0.015606 1 46969 33.195 33.195 1 1.4685 1.1944 0 29928000 12196000 17732000 1193 759 474 487 1875 1875 AGLLQVYIHTQK 12 1 0 Unmodified _AGLLQVYIHTQK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65;A0A087WVM7;A0A0U3B3H7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.8932 2 685.893169 1369.77178 73477.05 0.50544 0.00034668 0.14916 0.00010231 0.6546 0.00044899 685.893216385913 689.90031728226 85.864 0.52103 85.864 85.704 86.225 0 160 34 7 0 0 0 0.0063345 2 46997 49.3 49.3 1 1.4877 1.1674 0 16898000 6944800 9952700 1194 759 474 487 1876;1877 1877 AGLLQVYIHTQK 12 1 0 Unmodified _AGLLQVYIHTQK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65;A0A087WVM7;A0A0U3B3H7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 457.5975 3 457.597871 1369.77178 89007.13 0.069806 3.1943E-05 0.079517 3.6387E-05 0.14932 6.833E-05 457.597929213716 460.269263302221 85.81 0.84215 85.81 85.536 86.378 0 240 46 8 0 0 0 0.050488 1 46104 14.791 14.791 1 1.4085 1.1304 0 18248000 8169200 10078000 1195 759 474 487 1878 1878 AGLLQVYIHTQK 12 1 0 Unmodified _AGLLQVYIHTQK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65;A0A087WVM7;A0A0U3B3H7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.9005 2 685.893169 1369.77178 72977.52 0.57704 0.00039579 -0.15676 -0.00010752 0.42028 0.00028827 685.893113434912 689.900149282516 85.823 0.65801 85.823 85.573 86.231 0 182 36 7 0 0 0 1.0572E-05 2 46144 107.79 107.79 1 1.2208 0.99015 0 13219000 5872500 7346200 1196 759 474 487 1879;1880 1879 AGLNCSTENMPIK 13 1 0 Oxidation (M) _AGLNCSTENM(ox)PIK_ AGLNCSTENM(1)PIK AGLNCSTENM(42.72)PIK 0 1 0 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.8431 2 725.836876 1449.6592 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.823 1 32.823 32.323 33.323 0 0 0 0 0.018383 1 16328 42.718 30.555 1 1197 1445 475 488 1881 1881 1150 AGLNCSTENMPIK 13 1 0 Oxidation (M) _AGLNCSTENM(ox)PIK_ AGLNCSTENM(1)PIK AGLNCSTENM(64.44)PIK 0 1 0 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.8426 2 725.836876 1449.6592 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.375 1 32.375 31.875 32.875 0 0 0 0 0.0015195 1 16100 64.439 45.693 1 1198 1445 475 488 1882 1882 1150 AGLPIYECNSR 11 0 1 Unmodified _AGLPIYECNSR_ 0 0 0 O43463;B4DMP6 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3107 2 640.308612 1278.60267 79647.45 0.82969 0.00053126 -0.15725 -0.00010069 0.67244 0.00043057 640.308533044483 645.312675518791 58.508 0.43216 58.508 58.257 58.689 0 114 35 5 0 0 0 0.00046763 1 33993 76.17 70.249 1 0.87203 1.0055 0 72159000 38139000 34020000 1199 1385 476 489 1883 1883 AGLPIYECNSR 11 0 1 Unmodified _AGLPIYECNSR_ 0 0 0 O43463;B4DMP6 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.3128 2 640.308612 1278.60267 75419.9 0.58652 0.00037555 -0.30103 -0.00019275 0.28549 0.0001828 640.308520939533 645.312734897785 69.342 0.92118 69.342 68.969 69.89 0 305 63 9 0 0 0 0.032358 2 35454 37.696 35.542 1 1.954 1.5775 0 10876000 3828300 7048200 1200 1385 476 489 1884;1885 1885 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7694 2 472.769252 943.52395 86531.68 0.15293 7.2301E-05 0.15766 7.4539E-05 0.31059 0.00014684 472.769080308955 477.773615792874 72.697 0.325 72.697 72.544 72.869 0 95 22 7 0 0 0 0.0009829 1 42600 91.626 34.067 1 0.80279 0.88204 0 54076000 31486000 22590000 1201 312;832;1462;1487;1890 477 490 1886 1886 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7692 2 472.769252 943.52395 87906.24 0.24926 0.00011784 0.048121 2.275E-05 0.29738 0.00014059 472.769250751125 477.773333464508 79.035 1.2032 79.035 78.111 79.314 0 327 108 5 0 0 0 0.00076604 2 46605 94.662 56.529 1 0.66809 0.74084 0 66557000 35386000 31171000 1202 312;832;1462;1487;1890 477 490 1887;1888 1887 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7695 2 472.769252 943.52395 87616.59 0.40802 0.0001929 -0.93961 -0.00044422 -0.53159 -0.00025132 472.769517178604 477.773503158159 82.729 1.4718 82.729 81.919 83.391 7.6294E-06 344 126 5 0 0 0 0.0009829 1 49043 91.626 55.441 1 0.72491 0.76818 0 41576000 18029000 23547000 1203 312;832;1462;1487;1890 477 490 1889 1889 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7693 2 472.769252 943.52395 90972.82 0.45534 0.00021527 0.081104 3.8343E-05 0.53645 0.00025362 472.769072346249 477.773679161053 86.901 0.4375 86.901 86.616 87.053 0 87 30 4 0 0 0 0.003303 1 52365 72.138 32.035 1 0.68396 0.70688 0 13894000 8676500 5217100 1204 312;832;1462;1487;1890 477 490 1890 1890 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7691 2 472.769252 943.52395 92048.55 0.46131 0.00021809 -0.15921 -7.5269E-05 0.3021 0.00014282 472.768863582218 477.773621785308 93.35 0.42323 93.35 93.054 93.477 0 78 34 4 0 0 0 0.018746 1 56530 51.787 15.602 1 0.687 0.71474 0 13483000 9266900 4215600 1205 312;832;1462;1487;1890 477 490 1891 1891 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7695 2 472.769252 943.52395 90968.53 0.40447 0.00019122 0.1036 4.8979E-05 0.50807 0.0002402 472.769141393902 477.77333078971 98.086 0.41486 98.086 97.787 98.202 0 80 32 4 0 0 0 0.013941 1 59950 56.122 26.784 1 0.75073 0.75242 0 9066700 4863300 4203300 1206 312;832;1462;1487;1890 477 490 1892 1892 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7693 2 472.769252 943.52395 92494.08 0.7095 0.00033543 0.69614 0.00032911 1.4056 0.00066454 472.769133326676 477.77319065024 130.73 0.40286 130.73 130.56 130.97 1.5259E-05 62 25 4 0 0 0 0.027424 1 85363 47.067 18.555 1 0.71961 0.78086 0 1827300 1032100 795200 1207 312;832;1462;1487;1890 477 490 1893 1893 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7693 2 472.769252 943.52395 88535.23 0.53096 0.00025102 -0.42939 -0.000203 0.10156 4.8017E-05 472.768926886797 477.773155971092 143.84 1.6285 143.84 143.52 145.15 0 821 176 7 0 0 0 0.012348 3 91060 57.559 22.269 1 0.71974 0.75353 0 12684000 7264400 5419700 1208 312;832;1462;1487;1890 477 490 1894;1895;1896 1894 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7704 2 472.769252 943.52395 NaN NaN NaN -0.044519 -2.1047E-05 NaN NaN NaN NaN 73.329 5.1773 73.329 72.933 78.111 0 0 0 0 8.8652E-08 6 43094 127.84 76.057 1 NaN NaN 0 11331000000 11331000000 0 1209 312;832;1462;1487;1890 477 490 1897;1898;1899;1900;1901;1902 1897 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7693 2 472.769252 943.52395 NaN NaN NaN -0.090687 -4.2874E-05 NaN NaN NaN NaN 80.117 1.4131 80.117 79.138 80.551 0 0 0 0 0.020356 1 47766 58.604 27.886 1 NaN NaN 0 26263000 26263000 0 1210 312;832;1462;1487;1890 477 490 1903 1903 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.7741 2 472.769252 943.52395 NaN NaN NaN 0.4712 0.00022277 NaN NaN NaN NaN 83.433 0.62463 83.433 83.246 83.871 -7.6294E-06 0 0 0 0.013135 2 50063 64.265 23.996 1 NaN NaN 0 10138000 0 10138000 1211 312;832;1462;1487;1890 477 490 1904;1905 1905 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.77 2 472.769252 943.52395 NaN NaN NaN -0.065496 -3.0965E-05 NaN NaN NaN NaN 108.26 0.40932 108.26 107.91 108.32 -7.6294E-06 0 0 0 0.035231 1 67577 51.787 26.864 1 NaN NaN 0 1755000 1755000 0 1212 312;832;1462;1487;1890 477 490 1906 1906 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.7731 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.453 1 80.453 79.953 80.953 0 0 0 0 0.022195 1 47833 55.531 16.739 1 1213 312;832;1462;1487;1890 477 490 1907 1907 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7693 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.061 1 86.061 85.561 86.561 0 0 0 0 5.6576E-06 1 51770 114.78 70.388 1 1214 312;832;1462;1487;1890 477 490 1908 1908 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7705 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.496 1 88.496 87.996 88.996 7.6294E-06 0 0 0 0.0047062 1 53352 68.787 24.095 1 1215 312;832;1462;1487;1890 477 490 1909 1909 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7925 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.041 1 90.041 89.541 90.541 0 0 0 0 0.043224 1 54373 48.756 5.5093 1 1216 312;832;1462;1487;1890 477 490 1910 1910 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7692 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.887 1 90.887 90.387 91.387 0 0 0 0 0.015219 1 54956 58.604 22.209 1 1217 312;832;1462;1487;1890 477 490 1911 1911 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7696 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.465 1 92.465 91.965 92.965 0 0 0 0 0.051927 1 56036 45.952 15.234 1 1218 312;832;1462;1487;1890 477 490 1912 1912 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7692 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.56 1 116.56 116.06 117.06 0 0 0 0 0.02524 1 74443 54.549 16.311 1 1219 312;832;1462;1487;1890 477 490 1913 1913 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7697 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.11 1 118.11 117.61 118.61 0 0 0 0 0.052654 1 75743 45.718 15 1 1220 312;832;1462;1487;1890 477 490 1914 1914 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7702 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.9 1 118.9 118.4 119.4 7.6294E-06 0 0 0 0.052654 1 76383 45.718 7.4798 1 1221 312;832;1462;1487;1890 477 490 1915 1915 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7696 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.46 1 120.46 119.96 120.96 0 0 0 0 0.016298 1 77670 57.559 19.321 1 1222 312;832;1462;1487;1890 477 490 1916 1916 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7695 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 148.81 1 148.81 148.31 149.31 0 0 0 0 0.004574 1 92963 68.915 20.411 1 1223 312;832;1462;1487;1890 477 490 1917 1917 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7692 2 472.769252 943.52395 86559.45 -0.19744 -9.3345E-05 -0.52822 -0.00024972 -0.72566 -0.00034307 472.769059911174 477.773663873956 71.354 0.38965 71.354 71.167 71.557 0 119 29 7 0 0 0 0.00034628 1 42764 101.28 46.735 1 0.88581 1.0276 0 65148000 36406000 28743000 1224 312;832;1462;1487;1890 477 490 1918 1918 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2713 2 472.769252 943.52395 87895.02 0.085438 4.0393E-05 1.1199 0.00052946 1.2054 0.00056986 472.76969022048 477.773752454535 80.692 0.42316 80.692 80.416 80.839 0 105 33 4 0 0 0 0.0019213 1 49296 79.116 47.181 1 0.748 0.81765 0 35990000 19459000 16530000 1225 312;832;1462;1487;1890 477 490 1919 1919 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7704 2 472.769252 943.52395 NaN NaN NaN -0.10129 -4.7887E-05 NaN NaN NaN NaN 72.003 3.0701 72.003 71.464 74.535 0 0 0 0 8.8652E-08 4 43283 127.84 77.717 1 NaN NaN 0 14469000000 14469000000 0 1226 312;832;1462;1487;1890 477 490 1920;1921;1922;1923 1920 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7691 2 472.769252 943.52395 NaN NaN NaN 0.1494 7.0632E-05 NaN NaN NaN NaN 74.588 5.9056 74.588 74.511 80.416 0 0 0 0 3.5426E-06 5 47519 117.16 68.767 1 NaN NaN 0 233790000 233790000 0 1227 312;832;1462;1487;1890 477 490 1924;1925;1926;1927;1928 1926 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7697 2 472.769252 943.52395 NaN NaN NaN 0.29478 0.00013936 NaN NaN NaN NaN 84.816 1.1863 84.816 84.016 85.202 0 0 0 0 0.0081468 1 52287 68.787 36.316 1 NaN NaN 0 15290000 15290000 0 1228 312;832;1462;1487;1890 477 490 1929 1929 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.77 2 472.769252 943.52395 NaN NaN NaN -0.41161 -0.0001946 NaN NaN NaN NaN 93.328 0.312 93.328 93.123 93.435 0 0 0 0 0.009902 1 57847 66.799 18.296 1 NaN NaN 0 3261600 3261600 0 1229 312;832;1462;1487;1890 477 490 1930 1930 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7689 2 472.769252 943.52395 NaN NaN NaN -0.10349 -4.8926E-05 NaN NaN NaN NaN 117.28 0.56678 117.28 117.15 117.71 -7.6294E-06 0 0 0 0.0080845 1 76844 68.915 31.894 1 NaN NaN 0 1659500 1659500 0 1230 312;832;1462;1487;1890 477 490 1931 1931 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.7734 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.665 1 74.665 74.165 75.165 0 0 0 0 0.0031482 1 44953 75.213 20.663 1 1231 312;832;1462;1487;1890 477 490 1932 1932 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.7733 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.174 1 76.174 75.674 76.674 0 0 0 0 0.0033111 1 45952 72.485 29.238 1 1232 312;832;1462;1487;1890 477 490 1933 1933 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.7736 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.567 1 77.567 77.067 78.067 0 0 0 0 0.0082933 1 46947 65.313 8.0316 1 1233 312;832;1462;1487;1890 477 490 1934 1934 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.7733 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.329 1 78.329 77.829 78.829 0 0 0 0 0.015002 1 47497 58.815 12.933 1 1234 312;832;1462;1487;1890 477 490 1935 1935 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.7736 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.447 1 79.447 78.947 79.947 0 0 0 0 0.050456 1 48269 46.426 4.9236 1 1235 312;832;1462;1487;1890 477 490 1936 1936 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7707 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.019 1 86.019 85.519 86.519 0 0 0 0 0.0027 1 53030 82.671 49.314 1 1236 312;832;1462;1487;1890 477 490 1937 1937 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.771 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.434 1 87.434 86.934 87.934 0 0 0 0 0.0031464 1 53878 75.243 25.885 1 1237 312;832;1462;1487;1890 477 490 1938 1938 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7695 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.974 1 89.974 89.474 90.474 0 0 0 0 0.01483 1 55588 58.981 17.329 1 1238 312;832;1462;1487;1890 477 490 1939 1939 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7689 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.52 1 102.52 102.02 103.02 -7.6294E-06 0 0 0 0.012775 1 64730 60.972 22.734 1 1239 312;832;1462;1487;1890 477 490 1940 1940 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7693 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.69 1 114.69 114.19 115.19 0 0 0 0 0.010973 1 74668 62.717 24.479 1 1240 312;832;1462;1487;1890 477 490 1941 1941 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7696 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.58 1 115.58 115.08 116.08 0 0 0 0 0.033814 1 75444 51.787 10.285 1 1241 312;832;1462;1487;1890 477 490 1942 1942 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7691 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.43 1 116.43 115.93 116.93 0 0 0 0 0.0088665 1 76180 64.757 28.572 1 1242 312;832;1462;1487;1890 477 490 1943 1943 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7695 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.1 1 118.1 117.6 118.6 7.6294E-06 0 0 0 0.052654 1 77599 45.718 15 1 1243 312;832;1462;1487;1890 477 490 1944 1944 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7692 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.9 1 118.9 118.4 119.4 0 0 0 0 0.04604 1 78295 47.849 17.13 1 1244 312;832;1462;1487;1890 477 490 1945 1945 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7692 2 472.769252 943.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.62 1 132.62 132.12 133.12 0 0 0 0 0.052654 1 88878 45.718 9.8378 1 1245 312;832;1462;1487;1890 477 490 1946 1946 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;V9GZN0;A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;Q96QV6;P16104 Q8IUE6;A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST2H2AB;HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 472.7701 2 472.769252 943.52395 NaN NaN NaN -0.27076 -0.00012801 NaN NaN NaN NaN 83.801 8.9823 83.801 83.4 92.382 0 0 0 0 5.2097E-05 8 45420 104.21 58.491 1 NaN NaN 0 1582100000 1582100000 0 1246 312;832;1462;1487;1890 477 490 1947;1948;1949;1950;1951;1952;1953;1954 1949 AGLSEEDDSLVDVYYR 16 0 1 Unmodified _AGLSEEDDSLVDVYYR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 916.4245 2 915.923246 1829.83194 62196.16 0.72578 0.00066475 -0.20492 -0.00018769 0.52085 0.00047706 915.923174300915 920.927244868682 110.95 0.55145 110.95 110.68 111.23 0 158 22 10 0 0 0 8.7368E-05 2 64096 80.522 80.522 1 1.3339 1.1107 0 22230000 9344100 12885000 1247 1741 478 491 1955;1956 1956 AGLSEEDDSLVDVYYR 16 0 1 Unmodified _AGLSEEDDSLVDVYYR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 915.9237 2 915.923246 1829.83194 62919.95 0.54004 0.00049464 -0.0269 -2.4639E-05 0.51314 0.00047 915.92342297934 920.927591361354 110.91 0.68195 110.91 110.64 111.33 0 204 33 8 0 0 0 3.6725E-05 2 63182 84.718 84.718 1 1.1583 0.97833 0 17932000 7729900 10202000 1248 1741 478 491 1957;1958 1958 AGLSHYVK 8 1 0 Unmodified _AGLSHYVK_ 0 0 0 H3BTR4;B3KPB2;Q96BT3;A8K662;B4DV17;B4DWP4 H3BTR4 H3BTR4 CENPT Centromere protein T MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 441.7495 2 437.742702 873.470852 91618.08 -0.014068 -6.1581E-06 -0.004677 -2.0473E-06 -0.018745 -8.2055E-06 437.742690093289 441.749673048998 24.425 0.41323 24.425 24.195 24.608 0 75 19 6 0 0 0 0.040852 1 8093 47.082 31.446 1 1.3161 1.0679 0 2828400 1197200 1631200 1249 920 479 492 1959 1959 AGLSPANCQSDR 12 0 1 Unmodified _AGLSPANCQSDR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.2957 2 638.29095 1274.56735 74006.49 0.61463 0.00039231 -0.62753 -0.00040054 -0.012894 -8.2302E-06 638.290725773608 643.294871768882 21.155 0.26859 21.155 21.014 21.282 0 62 12 8 0 0 0 1.9348E-05 2 7458 103.7 103.7 1 0.97608 0.99321 0 14901000 7076100 7824800 1250 1742 480 493 1960;1961 1961 AGLSPANCQSDR 12 0 1 Unmodified _AGLSPANCQSDR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.7977 2 638.29095 1274.56735 77328.45 0.42384 0.00027054 -0.012495 -7.9757E-06 0.41135 0.00026256 638.792617110035 643.295149551872 21.087 0.253 21.087 20.927 21.18 0 54 13 7 0 0 0 0.0005793 2 7238 68.893 68.893 1 1.0299 1.0252 0 8026400 3749000 4277400 1251 1742 480 493 1962;1963 1962 AGLSPANCQSDR 12 0 1 Unmodified _AGLSPANCQSDR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.2954 2 638.29095 1274.56735 74296.52 0.35153 0.00022438 0.12573 8.0252E-05 0.47726 0.00030463 638.291072997155 643.295249831033 22.963 0.34537 22.963 22.778 23.124 1.9073E-06 66 13 8 0 0 0 0.00010254 2 7579 95.642 95.642 1 1.5146 1.2992 0 8445600 3242700 5202900 1252 1742 480 493 1964;1965 1964 AGLSQSLFER 10 0 1 Unmodified _AGLSQSLFER_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.2973 2 554.293288 1106.57202 81347.67 0.50366 0.00027918 -1.0883 -0.00060324 -0.58465 -0.00032407 554.293450644554 559.296566558531 72.614 0.81195 72.614 72.389 73.201 0 113 62 4 0 0 0 0.00097865 1 42773 78.149 15.49 1 3.25 3.2683 0 15887000 3873100 12014000 1253 231 481 494 1966 1966 AGLTEPVLIR 10 0 1 Unmodified _AGLTEPVLIR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.8245 2 534.824224 1067.63389 83106.55 0.40439 0.00021628 0.41736 0.00022321 0.82175 0.00043949 534.824444537289 539.828503462943 83.646 0.65209 83.646 83.311 83.963 0 327 53 9 0 0 0 1.0311E-09 2 50021 133.58 107.85 1 1.0092 1.1238 0 80151000 37635000 42515000 1254 1933 482 495 1967;1968 1968 AGLTEPVLIR 10 0 1 Unmodified _AGLTEPVLIR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.829 2 534.824224 1067.63389 82977.91 0.57854 0.00030941 0.31418 0.00016803 0.89272 0.00047745 534.824373017859 539.828495606398 82.554 0.6661 82.554 82.27 82.936 0 305 56 8 0 0 0 9.6551E-10 2 50455 133.86 108.94 1 1.0458 1.1966 0 86746000 47066000 39680000 1255 1933 482 495 1969;1970 1970 AGLTEPVLIR 10 0 1 Unmodified _AGLTEPVLIR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.8288 2 534.824224 1067.63389 82564.21 0.7236 0.000387 -0.17592 -9.4085E-05 0.54768 0.00029291 534.824124279927 539.8281977403 95.784 0.68954 95.784 95.398 96.087 0 252 46 8 0 0 0 0.012125 1 53524 51.059 37.48 1 1.3762 1.1287 0 12448000 5666200 6781900 1256 1933 482 495 1971 1971 AGLTEPVLIR 10 0 1 Unmodified _AGLTEPVLIR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.8281 2 534.824224 1067.63389 82570.62 0.42198 0.00022569 0.030799 1.6472E-05 0.45278 0.00024216 534.824207794314 539.828236308015 95.611 0.66676 95.611 95.204 95.87 0 224 45 7 0 0 0 2.4698E-05 1 52670 99.802 79.177 1 1.2261 0.99457 0 10191000 4538400 5653000 1257 1933 482 495 1972 1972 AGLTPEVQK 9 1 0 Unmodified _AGLTPEVQK_ 0 0 0 Q14191;Q59F09 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.7736 2 471.766374 941.518196 NaN NaN NaN -0.33704 -0.000159 NaN NaN NaN NaN 31.489 0.21106 31.489 31.355 31.566 1.9073E-06 0 0 0 0.0039937 1 15564 77.318 31.366 1 NaN NaN 0 6165800 0 6165800 1258 1728 483 496 1973 1973 AGLVGPEFHEK 11 1 0 Unmodified _AGLVGPEFHEK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.8796 3 395.208384 1182.60332 94656.87 0.27212 0.00010754 -0.070802 -2.7981E-05 0.20132 7.9563E-05 395.20841865616 397.879717788179 42.192 0.58191 42.192 42.01 42.592 -3.8147E-06 230 44 8 0 0 0 0.0023089 1 22320 42.809 29.04 1 1.9443 2.2034 0 92242000 27122000 65120000 1259 1754 484 497 1974 1974 AGLVGPEFHEK 11 1 0 Unmodified _AGLVGPEFHEK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.3159 2 592.308938 1182.60332 NaN NaN NaN -0.3013 -0.00017846 NaN NaN NaN NaN 42.187 0.41547 42.187 41.997 42.413 0 0 0 0 0.004329 1 22311 66.299 40.36 1 NaN NaN 0 36304000 0 36304000 1260 1754 484 497 1975 1975 AGLVGPEFHEK 11 1 0 Unmodified _AGLVGPEFHEK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.3171 2 592.308938 1182.60332 78522.32 0.89146 0.00052802 0.39369 0.00023319 1.2851 0.0007612 592.309374431767 596.316098265127 41.322 0.72583 41.322 40.883 41.609 0 170 60 4 0 0 0 0.032292 1 22090 37.73 4.0878 1 1.4889 1.5386 0 32932000 13085000 19847000 1261 1754 484 497 1976 1976 AGLVGPEFHEK 11 1 0 Unmodified _AGLVGPEFHEK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.8796 3 395.208384 1182.60332 93899.54 0.49989 0.00019756 0.38002 0.00015019 0.87991 0.00034775 395.208312416589 397.8799476661 41.239 0.78062 41.239 40.84 41.621 0 234 64 6 0 0 0 0.002166 1 22128 44.299 36.654 1 1.6109 1.6287 0 28791000 10996000 17795000 1262 1754 484 497 1977 1977 AGMSAEQAQGLLEK 14 1 0 Oxidation (M) _AGM(ox)SAEQAQGLLEK_ AGM(1)SAEQAQGLLEK AGM(74.96)SAEQAQGLLEK 0 1 0 Q2NLC8;E9PFN5;Q6FII1;Q9Y2Q3 Q2NLC8 Q2NLC8 GSTK1;LOC51064 Glutathione S-transferase kappa 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.863 2 724.856123 1447.69769 NaN NaN NaN 0.61108 0.00044294 NaN NaN NaN NaN 46.881 0.55014 46.881 46.511 47.061 0 0 0 0 0.00030311 1 25454 74.962 54.658 1 NaN NaN 0 5018300 0 5018300 1263 1234 485 498 1978 1978 950 AGMTHIVR 8 0 1 Unmodified _AGMTHIVR_ 0 0 0 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 442.7426 2 442.742179 883.469806 89001.62 -0.088591 -3.9223E-05 -0.2796 -0.00012379 -0.3682 -0.00016302 442.742048414686 447.746161178163 23.647 0.60669 23.647 23.438 24.045 0 106 31 6 0 0 0 0.0080668 2 8028 80.229 62.668 1 1.2336 1.0105 0 12945000 6108000 6836700 1264 1554;936 486 499 1979;1980 1980 AGMTHIVR 8 0 1 Unmodified _AGMTHIVR_ 0 0 0 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 442.7421 2 442.742179 883.469806 89202.48 -0.081556 -3.6108E-05 0.067423 2.9851E-05 -0.014133 -6.2574E-06 442.742165245182 447.746300017372 23.29 0.50318 23.29 23.059 23.562 0 99 22 7 0 0 0 0.0048039 2 7336 92.47 72.624 1 1.2231 0.99981 0 13112000 5935500 7176000 1265 1554;936 486 499 1981;1982 1982 AGNALTPELAPVQIK 15 1 0 Unmodified _AGNALTPELAPVQIK_ 0 0 0 A0A024R4Q5;P0C1Z6 A0A024R4Q5 A0A024R4Q5 TFPT TCF3 fusion partner MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.4434 2 761.435398 1520.85624 72194.13 0.79532 0.00060559 0.16023 0.000122 0.95555 0.00072759 761.435647352023 765.442410065075 110.58 0.35132 110.58 110.44 110.79 0 68 16 6 0 0 0 0.058075 1 63886 23.028 23.028 1 1.6397 1.3232 0 2788700 1040200 1748500 1266 159 487 500 1983 1983 AGNALTPELAPVQIK 15 1 0 Unmodified _AGNALTPELAPVQIK_ 0 0 0 A0A024R4Q5;P0C1Z6 A0A024R4Q5 A0A024R4Q5 TFPT TCF3 fusion partner MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.4437 2 761.435398 1520.85624 72057.19 0.8464 0.00064448 -0.18999 -0.00014467 0.65641 0.00049981 761.936996709749 765.442345867416 110.42 0.35327 110.42 110.23 110.58 0 78 19 6 0 0 0 0.047761 1 62844 23.676 23.676 1 1.649 1.2877 0 3433600 1351500 2082100 1267 159 487 500 1984 1984 AGNEKEEGETADTVGCCSLR 20 1 1 Unmodified _AGNEKEEGETADTVGCCSLR_ 0 0 1 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 734.6589 3 728.316163 2181.92666 72098.24 0.54272 0.00039527 -0.60559 -0.00044106 -0.062865 -4.5785E-05 728.315888440195 734.323356647905 37.262 0.37766 37.262 37.077 37.454 3.8147E-06 142 29 8 0 0 0 0.0016284 1 16730 31.314 27.473 1 2.0597 1.7145 0 3592000 1288700 2303300 1268 1470 488 501 1985 1985 AGNEKEEGETADTVGCCSLR 20 1 1 Unmodified _AGNEKEEGETADTVGCCSLR_ 0 0 1 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.3256 3 728.316163 2181.92666 71727.04 0.43258 0.00031506 -0.38431 -0.0002799 0.048269 3.5155E-05 728.315734174686 734.323540866115 37.481 0.441 37.481 37.267 37.708 0 162 35 8 0 0 0 0.051483 1 16351 15.241 15.241 1 2.0194 1.7375 0 2460700 743840 1716800 1269 1470 488 501 1986 1986 AGNFYVPAEPK 11 1 0 Unmodified _AGNFYVPAEPK_ 0 0 0 A0A024R814;P18124;A8MUD9;C9JIJ5;C9JZ88 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.8038 2 596.803488 1191.59242 77060.77 0.58216 0.00034743 -0.17674 -0.00010548 0.40542 0.00024195 596.803472895304 600.810408977567 63.331 1.6056 63.331 62.459 64.065 3.8147E-06 819 157 9 0 0 0 0.00028717 3 36224 89.029 12.859 1 0.92949 1.1059 0 606280000 305090000 301190000 1270 240 489 502 1987;1988;1989 1988 AGNFYVPAEPK 11 1 0 Unmodified _AGNFYVPAEPK_ 0 0 0 A0A024R814;P18124;A8MUD9;C9JIJ5;C9JZ88 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.8033 2 596.803488 1191.59242 76634.12 0.64333 0.00038394 -0.18051 -0.00010773 0.46282 0.00027621 596.803432992734 600.81036768338 62.27 1.6579 62.27 61.49 63.148 0 884 153 9 0 0 0 0.00031336 3 36246 87.895 15.04 1 0.92734 1.0918 0 457580000 237770000 219810000 1271 240 489 502 1990;1991;1992 1991 AGNFYVPAEPK 11 1 0 Unmodified _AGNFYVPAEPK_ 0 0 0 A0A024R814;P18124;A8MUD9;C9JIJ5;C9JZ88 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.811 2 596.803488 1191.59242 77741.03 0.57454 0.00034289 1.7246 0.0010292 2.2991 0.0013721 596.803427019328 600.810386023907 73.604 1.436 73.604 73.024 74.46 0 579 102 9 0 0 0 0.023148 2 37892 42.395 6.8838 1 0.77925 0.65812 0 56732000 31262000 25469000 1272 240 489 502 1993;1994 1994 AGNLGGGVVTIER 13 0 1 Unmodified _AGNLGGGVVTIER_ 0 0 0 Q7Z4W8;P35268;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8485 2 621.843676 1241.6728 76700.89 0.6357 0.0003953 -0.045075 -2.8029E-05 0.59062 0.00036728 621.843727236248 626.847745151594 63.637 1.3093 63.637 63.07 64.379 0 850 121 10 0 0 0 0.00012284 3 36704 87.184 54.864 1 0.79824 0.94799 0 896740000 482690000 414050000 1273 1543 490 503 1995;1996;1997 1997 AGNLGGGVVTIER 13 0 1 Unmodified _AGNLGGGVVTIER_ 0 0 0 Q7Z4W8;P35268;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8486 2 621.843676 1241.6728 76834.27 0.46566 0.00028957 0.062105 3.862E-05 0.52777 0.00032819 621.843884372452 626.847715805421 62.532 1.3852 62.532 61.916 63.301 3.8147E-06 819 124 10 0 0 0 0.00015572 4 36849 80.979 52.581 1 0.82081 0.9645 0 905830000 509960000 395870000 1274 1543 490 503 1998;1999;2000;2001 2001 AGNLGGGVVTIER 13 0 1 Unmodified _AGNLGGGVVTIER_ 0 0 0 Q7Z4W8;P35268;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8486 2 621.843676 1241.6728 76679.2 0.56805 0.00035324 -0.0529 -3.2896E-05 0.51515 0.00032034 621.843882428256 626.847692718238 73.298 2.0743 73.298 72.785 74.86 -7.6294E-06 768 145 10 0 0 0 0.00029589 4 39017 65.842 46.615 1 1.012 0.87667 0 153180000 73225000 79955000 1275 1543 490 503 2002;2003;2004;2005 2005 AGNLGGGVVTIER 13 0 1 Unmodified _AGNLGGGVVTIER_ 0 0 0 Q7Z4W8;P35268;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.848 2 621.843676 1241.6728 76227.3 0.48947 0.00030437 0.071264 4.4315E-05 0.56073 0.00034869 621.843944716206 626.847795246231 73.811 1.5158 73.811 73.23 74.746 0 692 101 10 0 0 0 0.0018318 4 38032 56.225 37.445 1 1.0063 0.87877 0 149280000 73876000 75401000 1276 1543 490 503 2006;2007;2008;2009 2007 AGNVIFR 7 0 1 Unmodified _AGNVIFR_ 0 0 0 Q6IAV5;A0A024R040;P55809;A1E286;E9PDW2;B7Z609 Q6IAV5 Q6IAV5 OXCT;OXCT1 Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.7279 2 388.724313 775.434072 NaN NaN NaN -0.154 -5.9863E-05 NaN NaN NaN NaN 40.841 0.18423 40.841 40.755 40.939 0 0 0 0 0.032172 1 21886 82.263 35.892 1 NaN NaN 0 9665800 0 9665800 1277 35 491 504 2010 2010 AGPESDAQYQFTGIK 15 1 0 Unmodified _AGPESDAQYQFTGIK_ 0 0 0 Q96IX5 Q96IX5 Q96IX5 USMG5 Up-regulated during skeletal muscle growth protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.896 2 806.386102 1610.75765 69334.51 0.75147 0.00060598 0.085771 6.9165E-05 0.83725 0.00067514 806.385961390727 810.39320950009 70.96 0.34766 70.96 70.801 71.149 0 67 26 4 0 0 0 0.001153 2 41364 48.568 48.568 1 0.77749 0.78593 0 5623300 2792700 2830600 1278 1973 492 505 2011;2012 2012 AGPESDAQYQFTGIK 15 1 0 Unmodified _AGPESDAQYQFTGIK_ 0 0 0 Q96IX5 Q96IX5 Q96IX5 USMG5 Up-regulated during skeletal muscle growth protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 806.8888 2 806.386102 1610.75765 69084.53 0.52788 0.00042567 1.1106 0.00089554 1.6384 0.0013212 806.386126096135 810.394352781791 81.283 0.60455 81.283 80.972 81.576 0 151 37 6 0 0 0 0.0067992 2 43977 36.32 36.32 1 1.5731 1.2807 0 2676300 1066000 1610300 1279 1973 492 505 2013;2014 2014 AGPESDAQYQFTGIK 15 1 0 Unmodified _AGPESDAQYQFTGIK_ 0 0 0 Q96IX5 Q96IX5 Q96IX5 USMG5 Up-regulated during skeletal muscle growth protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 810.3961 2 806.386102 1610.75765 69075.16 0.58876 0.00047477 1.0892 0.00087832 1.678 0.0013531 806.386282290206 810.896147633578 81.557 0.63315 81.557 81.195 81.828 0 102 31 5 0 0 0 0.029253 1 43317 27.672 22.179 1 1.3227 1.0291 0 2186800 866120 1320700 1280 1973 492 505 2015 2015 AGPFDEFQIATMLK 14 1 0 Oxidation (M) _AGPFDEFQIATM(ox)LK_ AGPFDEFQIATM(1)LK AGPFDEFQIATM(44.85)LK 0 1 0 Q8NBY1;B4E0Y9;Q9P289;Q499L9 Q8NBY1 Q8NBY1 STK26;MST4 Serine/threonine-protein kinase 26 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.3997 2 792.392341 1582.77013 NaN NaN NaN -0.85709 -0.00067915 NaN NaN NaN NaN 115.45 0.42934 115.45 115.33 115.76 0 0 0 0 0.0064439 1 75340 44.847 37.994 1 NaN NaN 0 9676700 0 9676700 1281 1065 493 506 2016 2016 826 AGPGDRDPPTRGEESR 16 0 3 Unmodified _AGPGDRDPPTRGEESR_ 0 0 2 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.2799 3 566.271434 1695.79247 81223.88 0.11106 6.2889E-05 0.093824 5.313E-05 0.20488 0.00011602 566.271375741268 576.27976114301 15.319 0.14698 15.319 15.233 15.38 0 89 15 8 0 0 0 0.063407 1 2452 16.88 11.337 1 1.201 1.4432 0 1072400 497580 574840 1282 1593 494 507 2017 2017 AGPGSEELTVTNAR 14 0 1 Unmodified _AGPGSEELTVTNAR_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.8582 2 701.352062 1400.68957 74829.8 1.0648 0.00074683 -0.21402 -0.00015011 0.85083 0.00059673 701.352113530831 706.857717606154 44.394 0.47986 44.394 44.231 44.71 0 135 41 4 0 0 0 0.00012451 2 23848 81.09 70.718 1 0.58541 0.60048 0 25838000 15915000 9923400 1283 371 495 508 2018;2019 2019 AGPGSEELTVTNAR 14 0 1 Unmodified _AGPGSEELTVTNAR_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.3561 2 701.352062 1400.68957 72714.23 1.1846 0.00083085 0.28081 0.00019694 1.4655 0.0010278 701.352071116814 706.356318234975 43.63 0.52222 43.63 43.442 43.964 0 130 40 4 0 0 0 8.7491E-05 2 23647 87.363 76.84 1 0.83793 0.91628 0 35103000 17049000 18054000 1284 371 495 508 2020;2021 2020 AGPGSLELCGLPSQK 15 1 0 Unmodified _AGPGSLELCGLPSQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.3878 2 757.38759 1512.76063 70805.36 0.27811 0.00021064 -0.51335 -0.00038881 -0.23524 -0.00017817 757.38695782957 761.394501379931 81.334 0.47104 81.334 81.052 81.523 0 141 39 6 0 0 0 5.9063E-31 2 48446 160.56 160.56 1 1.1647 1.1503 0 25412000 11429000 13983000 1285 1740 496 509 2022;2023 2023 AGPGSLELCGLPSQK 15 1 0 Unmodified _AGPGSLELCGLPSQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.3958 2 757.38759 1512.76063 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.513 1 81.513 81.013 82.013 0 0 0 0 0.035765 1 48594 41.401 25.829 1 1286 1740 496 509 2024 2024 AGPGSLELCGLPSQK 15 1 0 Unmodified _AGPGSLELCGLPSQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.3948 2 757.38759 1512.76063 70478.13 0.62452 0.000473 -0.61246 -0.00046387 0.01206 9.1338E-06 757.387188236354 761.394397469858 80.326 0.50861 80.326 80.06 80.568 0 145 40 6 0 0 0 6.7285E-16 2 48884 136.38 132.99 1 1.2271 1.2543 0 31574000 11974000 19600000 1287 1740 496 509 2025;2026 2026 AGPGSLELCGLPSQK 15 1 0 Unmodified _AGPGSLELCGLPSQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.3886 2 757.38759 1512.76063 67591.12 0.65472 0.00049588 -0.33522 -0.00025389 0.31949 0.00024198 757.38714087855 761.394677652043 93.111 0.51165 93.111 92.884 93.396 0 140 33 7 0 0 0 0.00022272 2 51984 67.952 61.262 1 1.7979 1.4042 0 16106000 4124600 11981000 1288 1740 496 509 2027;2028 2028 AGPGSLELCGLPSQK 15 1 0 Unmodified _AGPGSLELCGLPSQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.3871 2 757.38759 1512.76063 68969.2 0.43863 0.00033221 -0.22149 -0.00016775 0.21714 0.00016446 757.387290369548 761.394884344086 93.006 0.64412 93.006 92.731 93.376 0 161 41 7 0 0 0 0.00022244 3 51055 69.846 67.519 1 1.8919 1.5199 0 15786000 3703800 12082000 1289 1740 496 509 2029;2030;2031 2031 AGPGSSPLFSLLPGYR 16 0 1 Unmodified _AGPGSSPLFSLLPGYR_ 0 0 0 A0A024R0Q0;Q9H0W8 A0A024R0Q0 A0A024R0Q0 FLJ12886;SMG9 Protein SMG9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.9361 2 809.933022 1617.85149 69598.16 0.99006 0.00080188 0.37692 0.00030528 1.367 0.0011072 809.933758656896 814.936846951893 122.82 0.31302 122.82 122.63 122.95 0 64 24 5 0 0 0 0.0029665 1 81437 38.634 38.634 1 1.4611 1.5444 0 3909600 1060000 2849600 1290 54 497 510 2032 2032 AGPGTLSVTIEGPSK 15 1 0 Unmodified _AGPGTLSVTIEGPSK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3826 2 707.382831 1412.75111 74542.36 0.46839 0.00033133 -0.0083174 -5.8836E-06 0.46008 0.00032545 707.88397172606 711.390008564237 74.731 0.48164 74.731 74.5 74.982 0 155 41 5 0 0 0 0.0018874 1 43816 46.481 46.481 1 1.5236 1.5936 0 11970000 4991600 6978800 1291 1402 498 511 2033 2033 AGPIWDLR 8 0 1 Unmodified _AGPIWDLR_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645 B2R7W4;Q05CK9 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.2603 2 464.255977 926.497401 88999.15 0.12605 5.8519E-05 0.78567 0.00036475 0.91171 0.00042327 464.256066204427 469.260225859649 83.81 0.6702 83.81 83.369 84.039 0 217 55 6 0 0 0 0.015065 3 50157 61.999 38.98 1 1.305 1.3698 0 39470000 16749000 22720000 1292 855;864 499 512 2034;2035;2036 2035 AGPIWDLR 8 0 1 Unmodified _AGPIWDLR_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645 B2R7W4;Q05CK9 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.2604 2 464.255977 926.497401 88977.27 0.2163 0.00010042 0.88032 0.0004087 1.0966 0.00050911 464.255995640043 469.260208551303 82.694 0.85683 82.694 82.079 82.936 0 249 72 6 0 0 0 0.0062953 1 50592 87.754 60.23 1 1.1181 1.2235 0 39656000 20915000 18741000 1293 855;864 499 512 2037 2037 AGPNASIISLK 11 1 0 Unmodified _AGPNASIISLK_ 0 0 0 Q9H0A0 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.8139 2 535.813856 1069.61316 82784.98 0.4878 0.00026137 0.0083762 4.4881E-06 0.49618 0.00026586 535.813977303848 539.820889060001 72.271 0.76985 72.271 71.953 72.723 0 334 56 10 0 0 0 1.2643E-05 2 42186 107.79 79.614 1 0.98757 1.1717 0 506580000 268170000 238410000 1294 2023 500 513 2038;2039 2039 AGPNASIISLK 11 1 0 Unmodified _AGPNASIISLK_ 0 0 0 Q9H0A0 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.8145 2 535.813856 1069.61316 80975.09 0.55827 0.00029913 -0.12127 -6.4977E-05 0.437 0.00023415 535.813920990662 539.820817849477 70.902 0.62534 70.902 70.714 71.34 0 296 46 10 0 0 0 2.4636E-08 2 42349 121.5 96.683 1 0.94513 1.1138 0 607900000 298900000 309000000 1295 2023 500 513 2040;2041 2041 AGPNASIISLK 11 1 0 Unmodified _AGPNASIISLK_ 0 0 0 Q9H0A0 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.8217 2 535.813856 1069.61316 81580.97 0.4696 0.00025162 -0.043636 -2.3381E-05 0.42596 0.00022824 535.813950233898 539.82086003457 82.638 0.82552 82.638 82.316 83.141 0 339 50 10 0 0 0 0.00045221 1 44831 77.379 59.993 1 1.4658 1.2604 0 88463000 36586000 51877000 1296 2023 500 513 2042 2042 AGPNASIISLK 11 1 0 Unmodified _AGPNASIISLK_ 0 0 0 Q9H0A0 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.8212 2 535.813856 1069.61316 81529.32 0.45184 0.0002421 -0.2584 -0.00013845 0.19344 0.00010365 535.813814415881 539.820751347945 82.704 0.88671 82.704 82.406 83.293 0 333 50 10 0 0 0 0.00011828 1 44053 96.342 75.822 1 1.4344 1.2206 0 82254000 33120000 49134000 1297 2023 500 513 2043 2043 AGPSFEER 8 0 1 Unmodified _AGPSFEER_ 0 0 0 B7Z6D5;Q96GQ7 B7Z6D5 B7Z6D5 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.7122 2 446.711599 891.408646 91065.47 -0.068616 -3.0652E-05 0.37977 0.00016965 0.31116 0.000139 446.711811254926 451.715749343693 25.79 0.41032 25.79 25.513 25.923 1.9073E-06 96 22 7 0 0 0 0.031343 1 11245 51.346 14.951 1 0.69053 0.70642 0 32971000 18785000 14186000 1298 1099 501 514 2044 2044 AGPVAVQVK 9 1 0 Unmodified _AGPVAVQVK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.7735 2 434.766178 867.517802 NaN NaN NaN 0.61929 0.00026925 NaN NaN NaN NaN 35.494 0.56968 35.494 35.173 35.743 0 0 0 0 0.023334 1 17743 56.27 24.142 1 NaN NaN 0 22330000 0 22330000 1299 1712;1225 502 515 2045 2045 AGQAGLPCDYTANSK 15 1 0 Unmodified _AGQAGLPCDYTANSK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.8566 2 776.856654 1551.69876 70047.88 0.73753 0.00057296 -0.017446 -1.3553E-05 0.72009 0.00055941 777.358039169816 780.864188058095 40.686 0.44661 40.686 40.399 40.846 -3.8147E-06 132 40 4 0 0 0 0.00021983 1 21189 63.473 63.473 1 0.97775 0.99225 0 13501000 7865200 5636200 1300 1450 503 516 2046 2046 AGQAGLPCDYTANSK 15 1 0 Unmodified _AGQAGLPCDYTANSK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.8645 2 776.856654 1551.69876 70491.45 0.97605 0.00075825 -0.017156 -1.3328E-05 0.9589 0.00074492 776.856440746093 780.864009331705 39.702 0.53279 39.702 39.438 39.971 0 135 44 5 0 0 0 0.001683 1 20938 47.062 47.062 1 0.93184 0.97957 0 23934000 14301000 9632500 1301 1450 503 516 2047 2047 AGQAGLPCDYTANSK 15 1 0 Unmodified _AGQAGLPCDYTANSK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.8577 2 776.856654 1551.69876 NaN NaN NaN 0.069847 5.4261E-05 NaN NaN NaN NaN 39.554 0.084064 39.554 39.491 39.576 0 0 0 0 0.0033234 1 20972 60.641 34.703 1 NaN NaN 0 5264300 5264300 0 1302 1450 503 516 2048 2048 AGQAGLPCDYTANSK 15 1 0 Unmodified _AGQAGLPCDYTANSK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.8644 2 776.856654 1551.69876 70477.52 0.49176 0.00038203 -0.061135 -4.7493E-05 0.43063 0.00033454 776.856673451813 780.863825687044 47.001 0.67484 47.001 46.7 47.375 0 307 51 8 0 0 0 0.00070206 1 22637 51.841 45.308 1 2.0049 1.5811 0 10836000 3303800 7532300 1303 1450 503 516 2049 2049 AGQAGLPCDYTANSK 15 1 0 Unmodified _AGQAGLPCDYTANSK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.8574 2 776.856654 1551.69876 69354.72 0.30377 0.00023599 0.039017 3.0311E-05 0.34279 0.0002663 776.856787468248 780.863886765209 47.406 0.59111 47.406 47.086 47.677 0 279 45 8 0 0 0 0.00022295 2 22375 62.088 51.856 1 1.9863 1.6348 0 10346000 3438200 6907600 1304 1450 503 516 2050;2051 2051 AGQLLEVLQDAEAAVAGPSHAPDTSDVGATLLVSDGTHSVR 41 0 1 Unmodified _AGQLLEVLQDAEAAVAGPSHAPDTSDVGATLLVSDGTHSVR_ 0 0 0 A0A0C4DGT6;Q96AP0;B4DVI0 A0A0C4DGT6 A0A0C4DGT6 ACD Adrenocortical dysplasia protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1014.7654 4 1014.51336 4054.02433 60161.92 0.49027 0.00049739 0.27293 0.00027689 0.76321 0.00077428 1015.01593146761 1017.2662949454 132.76 0.17694 132.76 132.66 132.83 0 38 9 7 0 0 0 0.02657 1 86787 21.047 21.047 1 1.4906 1.4941 0 9076200 4118400 4957700 1305 517 504 517 2052 2052 AGQSAAGAAPGGGVDTR 17 0 1 Unmodified _AGQSAAGAAPGGGVDTR_ 0 0 0 P21333;Q5HY54 P21333 P21333 FLNA Filamin-A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.8536 2 721.852761 1441.69097 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.393 1 21.393 20.893 21.893 1.9073E-06 0 0 0 0.039458 1 7541 39.424 32.044 1 1306 1504 505 518 2053 2053 AGQVVTIWAAGAGATHSPPTDLVWK 25 1 0 Unmodified _AGQVVTIWAAGAGATHSPPTDLVWK_ 0 0 0 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.7843 3 845.111446 2532.31251 65788.32 0.9573 0.00080902 0.051134 4.3214E-05 1.0084 0.00085224 845.445406888048 848.117292541225 112.25 0.69073 112.25 111.94 112.63 0 329 47 10 0 0 0 3.2218E-13 2 70680 75.184 75.184 1 1.05 1.1275 0 39416000 18832000 20583000 1307 1440 506 519 2054;2055 2055 AGQVVTIWAAGAGATHSPPTDLVWK 25 1 0 Unmodified _AGQVVTIWAAGAGATHSPPTDLVWK_ 0 0 0 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.78 3 845.111446 2532.31251 65716.72 0.91099 0.00076988 -0.20971 -0.00017723 0.70128 0.00059266 845.445126884761 848.117066642398 111.55 0.62267 111.55 111.3 111.93 0 245 41 9 0 0 0 3.3028E-13 2 71906 74.876 74.876 1 1.1084 1.2389 0 53241000 26789000 26452000 1308 1440 506 519 2056;2057 2057 AGQVVTIWAAGAGATHSPPTDLVWK 25 1 0 Unmodified _AGQVVTIWAAGAGATHSPPTDLVWK_ 0 0 0 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.1174 3 845.111446 2532.31251 65699.52 0.95735 0.00080906 -0.02267 -1.9159E-05 0.93468 0.00078991 845.445511827333 848.11713363641 122.9 0.65529 122.9 122.67 123.33 -7.6294E-06 228 30 12 0 0 0 1.9136E-16 2 73351 93.397 93.397 1 1.3329 1.0827 0 27853000 11030000 16823000 1309 1440 506 519 2058;2059 2059 AGQVVTIWAAGAGATHSPPTDLVWK 25 1 0 Unmodified _AGQVVTIWAAGAGATHSPPTDLVWK_ 0 0 0 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.4474 3 845.111446 2532.31251 65698.91 0.89118 0.00075314 -0.032652 -2.7594E-05 0.85853 0.00072555 845.445756757716 848.117230187506 122.78 0.57391 122.78 122.54 123.12 -7.6294E-06 201 27 12 0 0 0 2.1708E-06 3 72304 45.546 45.546 1 1.3254 1.0816 0 26078000 11678000 14400000 1310 1440 506 519 2060;2061;2062 2061 AGSATVLSGSIAGLEGGSQLALR 23 0 1 Unmodified _AGSATVLSGSIAGLEGGSQLALR_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614;B4DYM1;B4E0T8 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1063.0773 2 1058.07385 2114.13315 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.36 1 113.36 112.86 113.86 0 0 0 0 0.024379 1 73548 33.301 13.977 1 1311 12 507 520 2063 2063 AGSLGINLVAANR 13 0 1 Unmodified _AGSLGINLVAANR_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3638 2 628.359493 1254.70443 80494.68 1.125 0.0007069 0.45388 0.0002852 1.5789 0.0009921 628.861572672091 633.363574746132 84.183 0.84346 84.183 83.848 84.691 0 227 67 6 0 0 0 1.6519E-09 1 50382 123.63 100.89 1 0.67989 0.70095 0 36842000 23738000 13103000 1312 672 508 521 2064 2064 AGSLGINLVAANR 13 0 1 Unmodified _AGSLGINLVAANR_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3642 2 628.359493 1254.70443 79014.52 0.62787 0.00039453 0.79692 0.00050075 1.4248 0.00089528 628.35998877097 633.363888928739 83.109 0.75145 83.109 82.805 83.556 -7.6294E-06 197 55 5 0 0 0 0.00014913 1 50782 88.495 76.902 1 0.75088 0.83399 0 43048000 21853000 21195000 1313 672 508 521 2065 2065 AGSLGINLVAANR 13 0 1 Unmodified _AGSLGINLVAANR_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.3645 2 628.359493 1254.70443 78909.09 0.78731 0.00049471 0.050248 3.1574E-05 0.83756 0.00052629 628.359399022235 633.363643282171 96.254 0.49193 96.254 96.008 96.5 7.6294E-06 146 30 7 0 0 0 9.8588E-06 1 54002 100.25 87.456 1 1.2038 1.0225 0 5231600 2513500 2718100 1314 672 508 521 2066 2066 AGSLGINLVAANR 13 0 1 Unmodified _AGSLGINLVAANR_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.3639 2 628.359493 1254.70443 79076.44 0.46039 0.00028929 0.44089 0.00027704 0.90128 0.00056633 628.359795023814 633.363743841313 96.051 0.53375 96.051 95.832 96.365 0 148 34 7 0 0 0 0.003047 1 53058 51.276 43.351 1 1.3091 1.0986 0 4854300 2223500 2630800 1315 672 508 521 2067 2067 AGSLYLSGAPGTGK 14 1 0 Unmodified _AGSLYLSGAPGTGK_ 0 0 0 B2R935;A0A024R1S2;Q99741 B2R935 B2R935 CDC6 Cell division control protein 6 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.8456 2 639.838059 1277.66157 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.582 1 56.582 56.082 57.082 0 0 0 0 0.021514 1 31880 44.299 26.48 1 1316 85 509 522 2068 2068 AGSLYLSGAPGTGK 14 1 0 Unmodified _AGSLYLSGAPGTGK_ 0 0 0 B2R935;A0A024R1S2;Q99741 B2R935 B2R935 CDC6 Cell division control protein 6 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.8456 2 639.838059 1277.66157 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.624 1 55.624 55.124 56.124 0 0 0 0 0.0021776 1 31912 65.695 43.609 1 1317 85 509 522 2069 2069 AGSLYLSGAPGTGK 14 1 0 Unmodified _AGSLYLSGAPGTGK_ 0 0 0 B2R935;A0A024R1S2;Q99741 B2R935 B2R935 CDC6 Cell division control protein 6 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.8451 2 639.838059 1277.66157 NaN NaN NaN -0.1582 -0.00010122 NaN NaN NaN NaN 65.598 0.41899 65.598 65.383 65.802 0 0 0 0 0.043699 1 33888 39.625 22.394 1 NaN NaN 0 1059300 0 1059300 1318 85 509 522 2070 2070 AGSLYLSGAPGTGK 14 1 0 Unmodified _AGSLYLSGAPGTGK_ 0 0 0 B2R935;A0A024R1S2;Q99741 B2R935 B2R935 CDC6 Cell division control protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.845 2 639.838059 1277.66157 77675.34 0.4653 0.00029771 -0.30244 -0.00019351 0.16285 0.0001042 639.837596167894 643.84489434077 66.079 0.41604 66.079 65.852 66.268 0 96 30 4 0 0 0 0.034215 1 33435 29.936 25.152 1 1.9383 1.6932 0 1320000 515780 804240 1319 85 509 522 2071 2071 AGSQLGPGYQHHAQPK 16 1 0 Unmodified _AGSQLGPGYQHHAQPK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.2818 3 559.281494 1674.82265 80527.64 0.20794 0.0001163 -0.068809 -3.8484E-05 0.13913 7.7813E-05 559.615892926412 561.952784900715 17.37 0.34545 17.37 17.167 17.513 0 47 10 8 0 0 0 2.2768E-05 2 4330 81.632 78.932 1 0.73583 0.73628 0 14001000 7892900 6108100 1320 1312 510 523 2072;2073 2072 AGSQLGPGYQHHAQPK 16 1 0 Unmodified _AGSQLGPGYQHHAQPK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.9533 3 559.281494 1674.82265 81960.33 0.12445 6.9605E-05 0.34782 0.00019453 0.47227 0.00026413 559.615922085907 561.953117219021 18.603 0.33591 18.603 18.434 18.77 0 55 13 7 0 0 0 0.0013928 2 4569 36.345 36.345 1 1.9109 1.5657 0 2455200 996520 1458700 1321 1312 510 523 2074;2075 2074 AGSTSWTGFQTK 12 1 0 Unmodified _AGSTSWTGFQTK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.8141 2 635.806759 1269.59897 77378.63 0.36799 0.00023397 0.028634 1.8206E-05 0.39662 0.00025218 635.806579561309 639.813935859505 63.438 0.81654 63.438 63.113 63.93 0 273 75 5 0 0 0 0.037481 1 31807 34.692 34.692 1 1.1576 0.94545 0 4718900 2366300 2352600 1322 214 511 524 2076 2076 AGTDPSHMPTGPQAASCLDLNLVTR 25 0 1 Oxidation (M) _AGTDPSHM(ox)PTGPQAASCLDLNLVTR_ AGTDPSHM(1)PTGPQAASCLDLNLVTR AGTDPSHM(58.27)PTGPQAASCLDLNLVTR 0 1 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.0864 3 875.751371 2624.23228 67327.77 0.83598 0.00073211 -0.085859 -7.5191E-05 0.75012 0.00065692 876.420081091343 879.421972648513 90.402 0.51348 90.402 90.09 90.603 0 140 42 7 0 0 0 7.7104E-10 3 54518 58.272 58.272 1 1.0232 1.0639 0 22115000 10557000 11558000 1323 1997 512 525 2077;2078;2079 2078 1830 AGTDPSHMPTGPQAASCLDLNLVTR 25 0 1 Oxidation (M) _AGTDPSHM(ox)PTGPQAASCLDLNLVTR_ AGTDPSHM(1)PTGPQAASCLDLNLVTR AGTDPSHM(63.11)PTGPQAASCLDLNLVTR 0 1 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.7549 3 875.751371 2624.23228 NaN NaN NaN -0.057857 -5.0668E-05 NaN NaN NaN NaN 90.249 0.21979 90.249 90.114 90.333 0 0 0 0 5.4091E-09 3 54472 63.115 60.191 1 NaN NaN 0 8598200 0 8598200 1324 1997 512 525 2080;2081;2082 2081 1830 AGTDPSHMPTGPQAASCLDLNLVTR 25 0 1 Oxidation (M) _AGTDPSHM(ox)PTGPQAASCLDLNLVTR_ AGTDPSHM(1)PTGPQAASCLDLNLVTR AGTDPSHM(55.99)PTGPQAASCLDLNLVTR 0 1 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 875.751 3 875.751371 2624.23228 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.178 1 90.178 89.678 90.678 0 0 0 0 1.2472E-05 1 54468 55.994 52.331 1 1325 1997 512 525 2083 2083 1830 AGTDPSHMPTGPQAASCLDLNLVTR 25 0 1 Oxidation (M) _AGTDPSHM(ox)PTGPQAASCLDLNLVTR_ AGTDPSHM(1)PTGPQAASCLDLNLVTR AGTDPSHM(74.88)PTGPQAASCLDLNLVTR 0 1 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 879.0884 3 875.751371 2624.23228 65846.98 0.6258 0.00054805 0.18547 0.00016243 0.81127 0.00071047 876.419974834693 879.087252354103 89.663 0.519 89.663 89.348 89.867 0 225 42 8 0 0 0 2.7185E-13 3 55256 74.876 74.876 1 1.0536 1.1539 0 31923000 14819000 17105000 1326 1997 512 525 2084;2085;2086 2086 1830 AGTDPSHMPTGPQAASCLDLNLVTR 25 0 1 Oxidation (M) _AGTDPSHM(ox)PTGPQAASCLDLNLVTR_ AGTDPSHM(1)PTGPQAASCLDLNLVTR AGTDPSHM(47.81)PTGPQAASCLDLNLVTR 0 1 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 875.753 3 875.751371 2624.23228 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.47 1 89.47 88.97 89.97 0 0 0 0 8.3544E-05 1 55243 47.806 44.882 1 1327 1997 512 525 2087 2087 1830 AGTDPSHMPTGPQAASCLDLNLVTR 25 0 1 Oxidation (M) _AGTDPSHM(ox)PTGPQAASCLDLNLVTR_ AGTDPSHM(1)PTGPQAASCLDLNLVTR AGTDPSHM(49.27)PTGPQAASCLDLNLVTR 0 1 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 875.7515 3 875.751371 2624.23228 64975.79 0.065929 5.7737E-05 0.3428 0.00030021 0.40873 0.00035794 876.085985093207 879.422141749036 103.42 0.52838 103.42 103.18 103.71 0 262 36 11 0 0 0 1.2662E-07 1 57952 49.266 49.266 1 0.64174 0.53341 0 7600300 4666900 2933400 1328 1997 512 525 2088 2088 1830 AGTDSPVSCASVTEER 16 0 1 Unmodified _AGTDSPVSCASVTEER_ 0 0 0 E9PEI0;Q69YH5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.8749 2 833.372866 1664.73118 NaN NaN NaN 0.34043 0.00028371 NaN NaN NaN NaN 42.372 0.23248 42.372 42.317 42.549 0 0 0 0 0.031604 1 22525 38.769 32.536 1 NaN NaN 0 5553500 5553500 0 1329 1233 513 526 2089 2089 AGTDSPVSCASVTEER 16 0 1 Unmodified _AGTDSPVSCASVTEER_ 0 0 0 E9PEI0;Q69YH5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.3773 2 833.372866 1664.73118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.739 1 41.739 41.239 42.239 0 0 0 0 0.00094293 1 22455 65.563 47.754 1 1330 1233 513 526 2090 2090 AGTDSPVSCASVTEER 16 0 1 Unmodified _AGTDSPVSCASVTEER_ 0 0 0 E9PEI0;Q69YH5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.3722 2 833.372866 1664.73118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.8 1 41.8 41.3 42.3 0 0 0 0 2.8459E-05 1 22493 92.856 81.537 1 1331 1233 513 526 2091 2091 AGTDSPVSCASVTEER 16 0 1 Unmodified _AGTDSPVSCASVTEER_ 0 0 0 E9PEI0;Q69YH5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.3763 2 833.372866 1664.73118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.879 1 41.879 41.379 42.379 0 0 0 0 0.0071239 1 22546 49.333 33.443 1 1332 1233 513 526 2092 2092 AGTDSPVSCASVTEER 16 0 1 Unmodified _AGTDSPVSCASVTEER_ 0 0 0 E9PEI0;Q69YH5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.8763 2 833.372866 1664.73118 66315.45 0.39781 0.00033152 -0.39521 -0.00032936 0.0025999 2.1667E-06 833.374135106906 838.377270015813 49.721 0.52741 49.721 49.448 49.975 -3.8147E-06 237 43 7 0 0 0 0.026457 1 24287 25.53 24.201 1 1.4396 1.2234 0 5280600 1773000 3507600 1333 1233 513 526 2093 2093 AGTDSPVSCASVTEER 16 0 1 Unmodified _AGTDSPVSCASVTEER_ 0 0 0 E9PEI0;Q69YH5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 833.8751 2 833.372866 1664.73118 66770.03 0.34015 0.00028348 -0.85396 -0.00071167 -0.51381 -0.00042819 833.875026078431 838.377064163129 50.218 0.53873 50.218 49.916 50.455 3.8147E-06 264 42 9 0 0 0 0.00038625 2 24029 51.211 47.324 1 1.6177 1.3422 0 5446600 1897500 3549100 1334 1233 513 526 2094;2095 2095 AGTEPSDAIR 10 0 1 Unmodified _AGTEPSDAIR_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7583 2 508.753995 1015.49344 86504.98 0.53411 0.00027173 0.51604 0.00026254 1.0502 0.00053427 508.753894677466 513.75806086374 23.905 0.64856 23.905 23.688 24.337 -1.9073E-06 107 31 7 0 0 0 1.1374E-05 1 9707 104.2 83.964 1 1.6367 1.6607 0 27958000 9589000 18369000 1335 1763 514 527 2096 2096 AGTFQAFEQFGQQLLAHGHYASPEIK 26 1 0 Unmodified _AGTFQAFEQFGQQLLAHGHYASPEIK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.8644 4 719.609508 2874.40893 71119.13 1.0302 0.00074133 -0.19245 -0.00013849 0.83773 0.00060284 720.110678241281 722.114135995585 131.38 0.45889 131.38 131.16 131.62 0 126 19 10 0 0 0 0.0011034 1 78795 33.814 33.814 1 2.9108 2.3736 0 7749500 1955500 5794000 1336 523 515 528 2097 2097 AGTGVDNVDLEAATR 15 0 1 Unmodified _AGTGVDNVDLEAATR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8676 2 744.868076 1487.7216 69960.43 0.57723 0.00042996 0.24447 0.0001821 0.8217 0.00061206 744.868450111169 749.872294966104 62.323 0.72466 62.323 61.96 62.684 3.8147E-06 376 66 7 0 0 0 7.6849E-06 2 36475 108.59 98.907 1 3.6381 4.1704 0 82626000 13583000 69042000 1337 1382 516 529 2098;2099 2099 AGTGVDNVDLEAATR 15 0 1 Unmodified _AGTGVDNVDLEAATR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 749.8749 2 744.868076 1487.7216 NaN NaN NaN -0.89022 -0.0006631 NaN NaN NaN NaN 73.151 0.96326 73.151 72.407 73.371 0 0 0 0 0.00016751 1 38588 78.287 71.904 1 NaN NaN 0 6000100 0 6000100 1338 1382 516 529 2100 2100 AGTGVDNVDLEAATR 15 0 1 Unmodified _AGTGVDNVDLEAATR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 745.3718 2 744.868076 1487.7216 70414.85 0.54718 0.00040757 1.2258 0.00091305 1.773 0.0013206 745.37161149627 749.872048165654 73.75 0.54944 73.75 73.434 73.984 0 237 37 9 0 0 0 0.00021964 2 38202 63.181 53.947 1 1.1244 0.90924 0 10627000 5138700 5488500 1339 1382 516 529 2101;2102 2102 AGTLLPVIQFLQK 13 1 0 Unmodified _AGTLLPVIQFLQK_ 0 0 0 Q15269;A0A0B4J2E5;A0A096LPI6 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.4415 2 714.43467 1426.85479 71112.38 0.22852 0.00016326 0.65781 0.00046996 0.88633 0.00063322 714.434993924431 718.44198382437 129.23 0.40567 129.23 129.02 129.42 1.5259E-05 225 32 9 0 0 0 1.1434E-08 2 84183 113.62 113.62 1 0.96994 1.1491 0 459030000 204350000 254680000 1340 1756 517 530 2103;2104 2103 AGTLLPVIQFLQK 13 1 0 Unmodified _AGTLLPVIQFLQK_ 0 0 0 Q15269;A0A0B4J2E5;A0A096LPI6 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.441 2 714.43467 1426.85479 70360.03 0.25503 0.0001822 0.73735 0.00052679 0.99238 0.00070899 714.435113759311 718.442013751021 128.78 0.3721 128.78 128.6 128.97 0 230 35 9 0 0 0 4.3908E-06 2 85979 107.15 107.15 1 0.87092 1.0213 0 328360000 178860000 149500000 1341 1756 517 530 2105;2106 2106 AGTLLPVIQFLQK 13 1 0 Unmodified _AGTLLPVIQFLQK_ 0 0 0 Q15269;A0A0B4J2E5;A0A096LPI6 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.6954 2 714.43467 1426.85479 71651.29 1.0002 0.00071455 0.16989 0.00012137 1.17 0.00083592 714.43470325072 718.441793356386 134.84 0.19141 134.84 134.76 134.95 0 15 3 7 0 0 0 6.9799E-05 1 81659 97.431 97.431 1 1.3306 1.127 0 61111000 26011000 35100000 1342 1756 517 530 2107 2107 AGTLSITEFADMLSGNAGGFR 21 0 1 Oxidation (M) _AGTLSITEFADM(ox)LSGNAGGFR_ AGTLSITEFADM(1)LSGNAGGFR AGTLSITEFADM(74.68)LSGNAGGFR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1071.5155 2 1066.00986 2130.00517 57873.56 0.60925 0.00064947 -1.0395 -0.0011081 -0.43024 -0.00045864 1066.51050925298 1071.51550339811 123.91 0.54014 123.91 123.59 124.13 0 178 38 7 0 0 0 1.4992E-08 2 80435 74.678 69.501 1 1.9838 1.9999 0 17574000 6195700 11378000 1343 1754 518 531 2108;2109 2108 1606 AGTLSITEFADMLSGNAGGFR 21 0 1 Oxidation (M) _AGTLSITEFADM(ox)LSGNAGGFR_ AGTLSITEFADM(1)LSGNAGGFR AGTLSITEFADM(61.41)LSGNAGGFR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1071.0146 2 1066.00986 2130.00517 NaN NaN NaN 0.84747 0.00090341 NaN NaN NaN NaN 123.24 0.44917 123.24 123 123.44 0 0 0 0 1.3773E-06 3 79924 61.409 46.378 1 NaN NaN 0 10381000 0 10381000 1344 1754 518 531 2110;2111;2112 2111 1606 AGTLSITEFADMLSGNAGGFR 21 0 1 Oxidation (M) _AGTLSITEFADM(ox)LSGNAGGFR_ AGTLSITEFADM(1)LSGNAGGFR AGTLSITEFADM(49.3)LSGNAGGFR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1071.5165 2 1066.00986 2130.00517 56575.05 0.76069 0.00081091 -0.073469 -7.8319E-05 0.68722 0.00073259 1066.51093766158 1071.51659683763 122.8 0.71776 122.8 122.51 123.23 0 195 55 7 0 0 0 1.7147E-06 1 81408 49.298 44.668 1 2.2725 2.2781 0 18937000 6319300 12618000 1345 1754 518 531 2113 2113 1606 AGTYFSNQAVR 11 0 1 Unmodified _AGTYFSNQAVR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.3055 2 607.301644 1212.58874 76100.24 0.57225 0.00034753 0.036447 2.2134E-05 0.6087 0.00036966 607.301534972837 612.305495412305 42.031 0.68682 42.031 41.726 42.413 0 218 50 7 0 0 0 7.5655E-10 1 22138 126.07 111.95 1 1.0584 1.2172 0 143940000 70188000 73750000 1346 1741 519 532 2114 2114 AGTYFSNQAVR 11 0 1 Unmodified _AGTYFSNQAVR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.3012 2 607.301644 1212.58874 77653.11 0.68144 0.00041384 0.65707 0.00039904 1.3385 0.00081288 607.301475953581 612.807422315782 41.095 0.83463 41.095 40.618 41.453 0 248 65 5 0 0 0 0.0013711 1 21908 68.016 68.016 1 0.76495 0.83716 0 33432000 20887000 12544000 1347 1741 519 532 2115 2115 AGTYFSNQAVR 11 0 1 Unmodified _AGTYFSNQAVR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.3021 2 607.301644 1212.58874 77052.51 0.27234 0.00016539 0.348 0.00021134 0.62034 0.00037673 607.301722701132 612.305912850072 48.667 0.67225 48.667 48.311 48.984 0 271 52 7 0 0 0 0.00034647 2 23715 85.676 79.085 1 1.2977 1.0624 0 13168000 5530700 7637400 1348 1741 519 532 2116;2117 2117 AGTYFSNQAVR 11 0 1 Unmodified _AGTYFSNQAVR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.3015 2 607.301644 1212.58874 76755.43 0.18762 0.00011394 0.49515 0.00030071 0.68277 0.00041465 607.301849523367 612.305866931382 49.032 0.77995 49.032 48.595 49.375 0 307 61 8 0 0 0 0.019396 1 23340 44.309 44.309 1 1.2892 1.0403 0 11304000 5241600 6062000 1349 1741 519 532 2118 2118 AGVAAPATQVAQVTLQSVQR 20 0 1 Unmodified _AGVAAPATQVAQVTLQSVQR_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 998.0536 2 998.05272 1994.09089 61503.76 0.72531 0.0007239 -0.066506 -6.6377E-05 0.65881 0.00065752 998.052567386263 1003.05716120227 100.96 0.64265 100.96 100.63 101.27 0 196 46 6 0 0 0 3.3996E-06 2 61855 76.759 76.759 1 1.5177 1.5526 0 32848000 12441000 20407000 1350 1754 520 533 2119;2120 2120 AGVAAPATQVAQVTLQSVQR 20 0 1 Unmodified _AGVAAPATQVAQVTLQSVQR_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 998.0543 2 998.05272 1994.09089 61636.65 0.49953 0.00049855 0.015901 1.587E-05 0.51543 0.00051442 998.553865541474 1003.55818592338 100.3 0.57066 100.3 99.996 100.57 0 228 47 7 0 0 0 1.5053E-06 3 62860 73.887 73.887 1 1.4418 1.6631 0 55016000 23453000 31563000 1351 1754 520 533 2121;2122;2123 2122 AGVAAPATQVAQVTLQSVQR 20 0 1 Unmodified _AGVAAPATQVAQVTLQSVQR_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1003.5605 2 998.05272 1994.09089 61682.38 0.72672 0.0007253 0.14347 0.00014319 0.87019 0.00086849 998.053357518301 1003.55821865014 113.56 0.41652 113.56 113.39 113.81 7.6294E-06 97 19 7 0 0 0 2.9939E-06 2 66149 84.468 84.468 1 3.0609 2.6157 0 5803000 1582100 4220900 1352 1754 520 533 2124;2125 2124 AGVAAPATQVAQVTLQSVQR 20 0 1 Unmodified _AGVAAPATQVAQVTLQSVQR_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1003.0569 2 998.05272 1994.09089 61727.66 0.30185 0.00030127 0.28008 0.00027953 0.58193 0.0005808 998.053004932488 1003.55850945229 113.41 0.42563 113.41 113.24 113.67 -7.6294E-06 88 20 8 0 0 0 3.4886E-06 2 65140 81.619 81.619 1 3.3008 2.7533 0 6601100 1370300 5230800 1353 1754 520 533 2126;2127 2126 AGVIFPVGR 9 0 1 Unmodified _AGVIFPVGR_ 0 0 0 O75367;B4DJC3;D6RCF2;Q5SQT3 O75367 O75367 H2AFY;H2AFY2 Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2744 2 458.27417 914.533787 88458.9 0.30881 0.00014152 -0.22568 -0.00010342 0.083125 3.8094E-05 458.274204809516 463.278070681389 78.838 2.0327 78.838 78.111 80.143 -7.6294E-06 1017 180 10 0 0 0 0.0036354 3 46811 71.296 24.925 1 1.0237 1.2187 0 1790900000 905880000 884990000 1354 1401 521 534 2128;2129;2130 2129 AGVIFPVGR 9 0 1 Unmodified _AGVIFPVGR_ 0 0 0 O75367;B4DJC3;D6RCF2;Q5SQT3 O75367 O75367 H2AFY;H2AFY2 Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.2744 2 458.27417 914.533787 87921.16 0.3907 0.00017905 -0.48655 -0.00022297 -0.095846 -4.3924E-05 458.274151559289 463.277940720038 77.486 1.9791 77.486 76.93 78.909 0 964 167 10 0 0 0 0.0045744 4 47098 68.915 37.625 1 1.0065 1.193 0 1832000000 875010000 957010000 1355 1401 521 534 2131;2132;2133;2134 2133 AGVIFPVGR 9 0 1 Unmodified _AGVIFPVGR_ 0 0 0 O75367;B4DJC3;D6RCF2;Q5SQT3 O75367 O75367 H2AFY;H2AFY2 Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 458.274 2 458.27417 914.533787 87389.95 0.42235 0.00019355 -0.5607 -0.00025695 -0.13835 -6.3403E-05 458.274098428647 463.277889642974 89.241 2.5548 89.241 88.616 91.171 0 813 166 10 0 0 0 0.0019213 2 49500 79.116 23.675 1 1.0853 0.94286 0 244300000 116870000 127430000 1356 1401 521 534 2135;2136 2135 AGVIFPVGR 9 0 1 Unmodified _AGVIFPVGR_ 0 0 0 O75367;B4DJC3;D6RCF2;Q5SQT3 O75367 O75367 H2AFY;H2AFY2 Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 458.2737 2 458.27417 914.533787 87855.98 -0.15691 -7.1906E-05 -0.14065 -6.4455E-05 -0.29755 -0.00013636 458.274261248892 463.278100880736 89.108 2.6939 89.108 88.448 91.142 -7.6294E-06 795 169 10 0 0 0 0.0087997 1 48595 60.76 29.47 1 1.1148 0.97367 0 195350000 92807000 102540000 1357 1401 521 534 2137 2137 AGVLAHLEEER 11 0 1 Unmodified _AGVLAHLEEER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.8866 3 408.55081 1222.6306 94147.47 0.18587 7.5939E-05 0.13422 5.4836E-05 0.32009 0.00013077 408.550842358851 411.886919651665 49.512 0.49816 49.512 49.373 49.871 0 155 31 8 0 0 0 0.00043368 2 27206 57.802 42.654 1 1.6485 1.8634 0 102800000 34987000 67814000 1358 81;1544 522 535 2138;2139 2139 AGVLAHLEEER 11 0 1 Unmodified _AGVLAHLEEER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3275 2 612.322576 1222.6306 NaN NaN NaN -0.10519 -6.4408E-05 NaN NaN NaN NaN 49.51 0.31148 49.51 49.357 49.669 0 0 0 0 2.2527E-12 1 27232 128.86 99.384 1 NaN NaN 0 24353000 0 24353000 1359 81;1544 522 535 2140 2140 AGVLAHLEEER 11 0 1 Unmodified _AGVLAHLEEER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.3231 2 612.322576 1222.6306 NaN NaN NaN 0.3892 0.00023831 NaN NaN NaN NaN 50.049 0.52792 50.049 49.847 50.375 3.8147E-06 0 0 0 0.015028 1 27520 54.608 35.828 1 NaN NaN 0 20438000 20438000 0 1360 81;1544 522 535 2141 2141 AGVLAHLEEER 11 0 1 Unmodified _AGVLAHLEEER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.8871 3 408.55081 1222.6306 92439.01 -0.23048 -9.4164E-05 0.22275 9.1003E-05 -0.007738 -3.1614E-06 408.550930590149 411.886931691509 47.665 0.61057 47.665 47.443 48.054 0 201 40 9 0 0 0 0.00057149 2 26486 66.262 50.009 1 1.6334 1.9006 0 409440000 172520000 236920000 1361 81;1544 522 535 2142;2143 2142 AGVLAHLEEER 11 0 1 Unmodified _AGVLAHLEEER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.3264 2 612.322576 1222.6306 76179.65 0.46948 0.00028747 0.021058 1.2894E-05 0.49053 0.00030036 612.3223117552 617.326712240953 57.261 0.91578 57.261 56.836 57.752 -3.8147E-06 215 63 5 0 0 0 0.00034828 1 28937 85.533 71.942 1 1.5647 1.3216 0 9563600 3283600 6280000 1362 81;1544 522 535 2144 2144 AGVLAHLEEER 11 0 1 Unmodified _AGVLAHLEEER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.3255 2 612.322576 1222.6306 75951.23 0.51195 0.00031348 -0.46322 -0.00028364 0.048725 2.9836E-05 612.32209399095 617.326311334637 57.481 0.8292 57.481 57.173 58.002 3.8147E-06 240 57 6 0 0 0 0.002424 1 28402 61.65 54.004 1 1.4888 1.2362 0 7693100 2559200 5134000 1363 81;1544 522 535 2145 2145 AGVLAHLEEERDLK 14 1 1 Unmodified _AGVLAHLEEERDLK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.2941 3 527.286133 1578.83657 83244.83 0.57285 0.00030206 -0.23416 -0.00012347 0.33869 0.00017859 527.286048106306 533.293334138426 65.837 0.64172 65.837 65.599 66.241 0 210 45 8 0 0 0 0.00010613 1 34045 65.092 46.954 1 3.0645 2.616 0 9841600 2656100 7185500 1364 81;1544 523 536 2146 2146 AGVLAHLEEERDLK 14 1 1 Unmodified _AGVLAHLEEERDLK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.2932 3 527.286133 1578.83657 82749.34 0.28805 0.00015188 -0.073153 -3.8573E-05 0.2149 0.00011331 527.286024754405 533.293458769696 65.907 0.54282 65.907 65.669 66.212 0 226 41 8 0 0 0 0.0013056 1 33314 48.177 30.039 1 3.0989 2.6081 0 7712400 2144100 5568300 1365 81;1544 523 536 2147 2147 AGVMALANLLQIQR 14 0 1 Oxidation (M) _AGVM(ox)ALANLLQIQR_ AGVM(1)ALANLLQIQR AGVM(103.55)ALANLLQIQR 0 1 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.9324 2 757.429593 1512.84463 NaN NaN NaN 0.04749 3.597E-05 NaN NaN NaN NaN 116.52 0.42191 116.52 116.33 116.75 0 0 0 0 3.0546E-07 1 74384 103.55 87.975 1 NaN NaN 0 5665400 5665400 0 1366 1793 524 537 2148 2148 1659 AGVMALANLLQIQR 14 0 1 Oxidation (M) _AGVM(ox)ALANLLQIQR_ AGVM(1)ALANLLQIQR AGVM(118.18)ALANLLQIQR 0 1 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.3766 2 757.429593 1512.84463 70643.9 0.62832 0.0004759 -0.22306 -0.00016896 0.40525 0.00030695 757.429807240167 762.433679800404 116.23 0.35402 116.23 116.01 116.37 0 99 21 6 0 0 0 2.0068E-13 1 74121 118.18 118.18 1 1.2207 1.284 0 11331000 5283100 6047600 1367 1793 524 537 2149 2149 1659 AGVMALANLLQIQR 14 0 1 Oxidation (M) _AGVM(ox)ALANLLQIQR_ AGVM(1)ALANLLQIQR AGVM(103.55)ALANLLQIQR 0 1 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.9313 2 757.429593 1512.84463 70984.8 0.60874 0.00046108 0.24268 0.00018381 0.85142 0.00064489 757.429846329016 762.434027532217 115.98 0.44196 115.98 115.78 116.22 0 104 28 5 0 0 0 1.4993E-06 1 75760 103.55 103.55 1 1.2739 1.2596 0 15203000 5814200 9388700 1368 1793 524 537 2150 2150 1659 AGVMALANLLQIQR 14 0 1 Oxidation (M) _AGVM(ox)ALANLLQIQR_ AGVM(1)ALANLLQIQR AGVM(123.86)ALANLLQIQR 0 1 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.3758 2 757.429593 1512.84463 70558.85 0.83166 0.00062992 -0.21131 -0.00016005 0.62034 0.00046987 757.429968525811 762.433542793561 115.61 0.4212 115.61 115.41 115.83 0 114 26 7 0 0 0 3.5531E-19 1 75494 123.86 123.86 1 1.336 1.3409 0 19060000 7344000 11716000 1369 1793 524 537 2151 2151 1659 AGVMALANLLQIQR 14 0 1 Oxidation (M) _AGVM(ox)ALANLLQIQR_ AGVM(1)ALANLLQIQR AGVM(61.56)ALANLLQIQR 0 1 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.4302 2 757.429593 1512.84463 NaN NaN NaN -0.025019 -1.895E-05 NaN NaN NaN NaN 128.41 0.33273 128.41 128.28 128.61 0 0 0 0 0.0011247 1 76723 61.56 54.871 1 NaN NaN 0 969610 969610 0 1370 1793 524 537 2152 2152 1659 AGVNTVTTLVENK 13 1 0 Unmodified _AGVNTVTTLVENK_ 0 0 0 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.3701 2 673.369724 1344.72489 73461.04 0.45138 0.00030394 0.10788 7.2642E-05 0.55926 0.00037659 673.369820015295 677.376885227845 72.597 1.1008 72.597 72.018 73.119 0 541 83 10 0 0 0 2.1389E-13 3 42770 128.81 97.317 1 0.92105 1.1009 0 815520000 429180000 386340000 1371 1648 525 538 2153;2154;2155 2155 AGVNTVTTLVENK 13 1 0 Unmodified _AGVNTVTTLVENK_ 0 0 0 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3699 2 673.369724 1344.72489 74131.28 0.29054 0.00019564 0.15698 0.00010571 0.44752 0.00030135 673.369886002666 677.376894242477 71.377 1.0525 71.377 70.799 71.852 0 511 79 10 0 0 0 0.00011395 2 43077 94.363 74.076 1 0.90726 1.0706 0 888240000 471400000 416840000 1372 1648 525 538 2156;2157 2157 AGVNTVTTLVENK 13 1 0 Unmodified _AGVNTVTTLVENK_ 0 0 0 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 677.3773 2 673.369724 1344.72489 72413.59 0.49155 0.000331 -0.070215 -4.7281E-05 0.42134 0.00028372 673.369642699342 677.37677179662 83.409 0.90118 83.409 82.99 83.891 7.6294E-06 371 59 10 0 0 0 0.00025078 2 45332 90.306 72.833 1 0.81261 0.70332 0 117270000 65179000 52086000 1373 1648 525 538 2158;2159 2159 AGVNTVTTLVENK 13 1 0 Unmodified _AGVNTVTTLVENK_ 0 0 0 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.3774 2 673.369724 1344.72489 73003.2 0.69487 0.0004679 -0.27858 -0.00018759 0.41628 0.00028031 673.369548686633 677.376595571332 83.511 0.89143 83.511 83.145 84.036 0 336 58 10 0 0 0 9.5051E-06 3 44650 132.44 111.06 1 0.82523 0.7057 0 112570000 60698000 51871000 1374 1648 525 538 2160;2161;2162 2161 AGVNTVTTLVENKK 14 2 0 Unmodified _AGVNTVTTLVENKK_ 0 0 1 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.2808 3 491.947229 1472.81986 85902.22 0.093562 4.6027E-05 0.21262 0.0001046 0.30618 0.00015063 491.94727082047 497.290239073208 54.945 0.65565 54.945 54.734 55.39 0 415 63 9 0 0 0 0.00034634 2 30846 54.09 47.209 1 0.89665 1.0576 0 323140000 155920000 167220000 1375 1648 526 539 2163;2164 2164 AGVNTVTTLVENKK 14 2 0 Unmodified _AGVNTVTTLVENKK_ 0 0 1 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.4173 2 737.417205 1472.81986 70202.05 0.5081 0.00037468 0.33252 0.0002452 0.84062 0.00061989 737.416851525718 745.431975628223 54.934 0.55692 54.934 54.801 55.358 0 245 54 6 0 0 0 0.00041716 1 30857 72.187 64.3 1 0.95626 1.1289 0 53869000 24944000 28925000 1376 1648 526 539 2165 2165 AGVNTVTTLVENKK 14 2 0 Unmodified _AGVNTVTTLVENKK_ 0 0 1 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.2907 3 491.947229 1472.81986 86083.21 0.23065 0.00011347 0.37051 0.00018227 0.60116 0.00029574 492.282248025635 497.290062339566 53.992 1.1238 53.992 53.548 54.672 0 455 101 9 0 0 0 4.9919E-05 2 30765 69.456 57.541 1 0.65845 0.76844 0 367630000 223750000 143880000 1377 1648 526 539 2166;2167 2167 AGVNTVTTLVENKK 14 2 0 Unmodified _AGVNTVTTLVENKK_ 0 0 1 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.4335 2 737.417205 1472.81986 70536.18 0.62809 0.00046316 0.49753 0.00036688 1.1256 0.00083005 737.417017143943 745.432133878925 53.98 0.47583 53.98 53.746 54.222 3.8147E-06 233 44 7 0 0 0 5.9207E-14 2 30772 139.32 82.892 1 0.94343 1.0941 0 75671000 36962000 38709000 1378 1648 526 539 2168;2169 2169 AGVNTVTTLVENKK 14 2 0 Unmodified _AGVNTVTTLVENKK_ 0 0 1 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.418 2 737.417205 1472.81986 70689.9 0.63958 0.00047164 -0.1506 -0.00011105 0.48899 0.00036059 737.416958905246 745.431267881508 64.725 0.44666 64.725 64.494 64.94 0 179 30 9 0 0 0 0.0030221 2 33340 61.419 51.414 1 0.85295 0.72573 0 29992000 16905000 13087000 1379 1648 526 539 2170;2171 2170 AGVNTVTTLVENKK 14 2 0 Unmodified _AGVNTVTTLVENKK_ 0 0 1 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.2899 3 491.947229 1472.81986 86465.84 0.205 0.00010085 -0.53062 -0.00026104 -0.32562 -0.00016019 491.947261078338 497.28930318106 64.726 0.55541 64.726 64.479 65.035 -7.6294E-06 200 39 9 0 0 0 0.038139 1 33347 18.179 16.156 1 0.74522 0.63123 0 71184000 41416000 29768000 1380 1648 526 539 2172 2172 AGVNTVTTLVENKK 14 2 0 Unmodified _AGVNTVTTLVENKK_ 0 0 1 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 745.4313 2 737.417205 1472.81986 70281.4 0.4362 0.00032166 -0.016001 -1.1799E-05 0.42019 0.00030986 737.417169409425 745.431305753252 65.112 0.44434 65.112 64.893 65.338 0 217 32 9 0 0 0 0.013066 2 32834 50.275 43.502 1 0.80911 0.6883 0 34744000 18367000 16377000 1381 1648 526 539 2173;2174 2174 AGVNTVTTLVENKK 14 2 0 Unmodified _AGVNTVTTLVENKK_ 0 0 1 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.2751 3 491.947229 1472.81986 86387.02 -0.0021112 -1.0386E-06 -0.31936 -0.00015711 -0.32147 -0.00015815 491.947278810714 497.289585454834 65.131 0.57153 65.131 64.879 65.45 0 248 41 11 0 0 0 0.01459 1 32814 33.147 21.886 1 0.7121 0.60817 0 68143000 37560000 30584000 1382 1648 526 539 2175 2175 AGVPGVAAPGAPAAAPPAK 19 1 0 Unmodified _AGVPGVAAPGAPAAAPPAK_ 0 0 0 P53350;B2R841;Q58A51;I3L387 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.4485 2 785.441015 1568.86748 67977.13 0.3428 0.00026925 0.52203 0.00041003 0.86483 0.00067928 785.441469385173 789.448401562627 67.116 0.54401 67.116 66.819 67.363 -7.6294E-06 270 41 9 0 0 0 1.3252E-05 2 38652 89.805 89.805 1 0.98034 1.1062 0 78641000 40132000 38510000 1383 1604 527 540 2176;2177 2176 AGVPGVAAPGAPAAAPPAK 19 1 0 Unmodified _AGVPGVAAPGAPAAAPPAK_ 0 0 0 P53350;B2R841;Q58A51;I3L387 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.4423 2 785.441015 1568.86748 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.364 1 67.364 66.864 67.864 0 0 0 0 0.003871 1 38930 69.721 56.52 1 1384 1604 527 540 2178 2178 AGVPGVAAPGAPAAAPPAK 19 1 0 Unmodified _AGVPGVAAPGAPAAAPPAK_ 0 0 0 P53350;B2R841;Q58A51;I3L387 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.9506 2 785.441015 1568.86748 67991.02 0.4715 0.00037033 0.20322 0.00015962 0.67472 0.00052995 785.94243367609 789.44799461711 66.145 0.61729 66.145 65.81 66.427 0 319 51 8 0 0 0 6.9318E-06 2 38896 77.64 77.64 1 0.98378 1.1058 0 73219000 36876000 36343000 1385 1604 527 540 2179;2180 2179 AGVPGVAAPGAPAAAPPAK 19 1 0 Unmodified _AGVPGVAAPGAPAAAPPAK_ 0 0 0 P53350;B2R841;Q58A51;I3L387 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.4487 2 785.441015 1568.86748 68021.06 0.46947 0.00036874 0.26561 0.00020862 0.73508 0.00057736 785.441044189221 789.448286573247 76.889 0.59558 76.889 76.633 77.229 0 217 37 8 0 0 0 2.8242E-05 2 40967 58.172 58.172 1 1.3897 1.0812 0 12456000 5300400 7155700 1386 1604 527 540 2181;2182 2181 AGVPGVAAPGAPAAAPPAK 19 1 0 Unmodified _AGVPGVAAPGAPAAAPPAK_ 0 0 0 P53350;B2R841;Q58A51;I3L387 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.4487 2 785.441015 1568.86748 68396.8 0.59088 0.0004641 0.17615 0.00013835 0.76703 0.00060245 785.441032762798 789.448197153276 77.262 0.62001 77.262 76.936 77.556 0 249 40 8 0 0 0 2.0831E-05 2 40348 61.344 61.344 1 1.4569 1.2035 0 11559000 4125800 7433100 1387 1604 527 540 2183;2184 2183 AGVQSGTNALLVVK 14 1 0 Unmodified _AGVQSGTNALLVVK_ 0 0 0 A0A024R0H6;Q8N7H5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.9036 2 678.895909 1355.77726 75716.95 0.46896 0.00031838 0.11542 7.836E-05 0.58439 0.00039674 679.39750937297 682.903280981738 90.093 0.54819 90.093 89.816 90.364 0 193 40 7 0 0 0 0.00018126 1 49793 72.006 72.006 1 1.9405 1.5561 0 7511400 2714200 4797200 1388 46 528 541 2185 2185 AGVSFSGHR 9 0 1 Acetyl (Protein N-term) _(ac)AGVSFSGHR_ 1 0 0 Q16643;D6R9W4;D6RFI1 Q16643 Q16643 DBN1 Drebrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.2426 2 480.238316 958.462078 85043.47 0.013458 6.4631E-06 0.017798 8.5472E-06 0.031256 1.501E-05 480.238396549662 485.242327242397 37.654 0.88828 37.654 37.044 37.933 0 285 71 6 0 0 0 0.0030467 2 19560 80.438 46.7 1 1.2898 1.4935 0 57285000 25700000 31586000 1389 1773 529 542 2186;2187 2186 AGVVGPELHEQLLSAEK 17 1 0 Unmodified _AGVVGPELHEQLLSAEK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.6609 3 592.987864 1775.94176 79275.41 0.79047 0.00046874 0.55293 0.00032788 1.3434 0.00079662 592.988059021018 595.65952948587 76.548 0.71157 76.548 76.166 76.877 0 375 58 10 0 0 0 2.0927E-05 2 44970 54.103 54.103 1 1.8177 2.0513 0 110070000 38305000 71768000 1390 1754 530 543 2188;2189 2189 AGVVGPELHEQLLSAEK 17 1 0 Unmodified _AGVVGPELHEQLLSAEK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 893.4873 2 888.978158 1775.94176 67775.04 0.36959 0.00032856 -0.34289 -0.00030482 0.026705 2.374E-05 889.480504819366 892.984987154417 87.562 0.32019 87.562 87.413 87.733 0 46 19 5 0 0 0 0.0014029 1 48166 41.092 41.092 1 2.2288 1.8785 0 2118500 581640 1536800 1391 1754 530 543 2190 2190 AGVVGPELHEQLLSAEK 17 1 0 Unmodified _AGVVGPELHEQLLSAEK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.66 3 592.987864 1775.94176 78975.52 0.54943 0.0003258 0.23492 0.00013931 0.78435 0.00046511 592.987994422613 595.659390719267 87.548 0.59392 87.548 87.213 87.807 7.6294E-06 202 33 9 0 0 0 0.0053118 2 47212 28.627 28.627 1 2.5456 2.0441 0 17723000 5075200 12648000 1392 1754 530 543 2191;2192 2191 AGYKPVAIQTYPILGEK 17 2 0 Acetyl (Protein N-term) _(ac)AGYKPVAIQTYPILGEK_ 1 0 1 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.0244 2 945.522202 1889.02985 63042.6 1.102 0.0010419 -0.085056 -8.0422E-05 1.0169 0.00096153 946.023560061585 953.536012605679 108.63 0.52319 108.63 108.34 108.87 0 223 36 8 0 0 0 7.5985E-05 2 67793 72.958 72.958 1 0.95818 1.1311 0 63040000 30678000 32362000 1393 1936 531 544 2193;2194 2194 AGYKPVAIQTYPILGEK 17 2 0 Acetyl (Protein N-term) _(ac)AGYKPVAIQTYPILGEK_ 1 0 1 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 946.0238 2 945.522202 1889.02985 62967.16 0.64373 0.00060866 -0.018731 -1.7711E-05 0.625 0.00059095 946.023534956015 953.535962302127 108.07 0.46568 108.07 107.84 108.3 0 221 34 8 0 0 0 8.1506E-05 2 68995 68.809 68.809 1 0.96514 1.1178 0 53800000 28419000 25381000 1394 1936 531 544 2195;2196 2196 AGYKPVAIQTYPILGEK 17 2 0 Acetyl (Protein N-term) _(ac)AGYKPVAIQTYPILGEK_ 1 0 1 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 946.0245 2 945.522202 1889.02985 62480.91 0.72698 0.00068738 0.0036947 3.4934E-06 0.73068 0.00069087 946.023552672226 954.037685335579 119.71 0.53885 119.71 119.5 120.04 0 186 25 10 0 0 0 2.632E-05 1 70923 83.087 83.087 1 1.1947 1.0145 0 44127000 19257000 24870000 1395 1936 531 544 2197 2197 AGYKPVAIQTYPILGEK 17 2 0 Acetyl (Protein N-term) _(ac)AGYKPVAIQTYPILGEK_ 1 0 1 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 945.5214 2 945.522202 1889.02985 62522.77 0.5657 0.00053488 0.067034 6.3382E-05 0.63273 0.00059826 946.023537828535 953.536325594511 119.52 0.53604 119.52 119.28 119.82 7.6294E-06 177 25 10 0 0 0 0.00016711 2 69829 55.196 55.196 1 1.2131 1.0327 0 39251000 17428000 21823000 1396 1936 531 544 2198;2199 2198 AGYPQYVSEILEK 13 1 0 Unmodified _AGYPQYVSEILEK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.8936 2 748.885207 1495.75586 70816.91 0.71655 0.00053662 -0.49413 -0.00037004 0.22243 0.00016657 748.884952171783 752.892287989896 103.51 0.86022 103.51 103.21 104.07 7.6294E-06 347 70 7 0 0 0 0.0036439 1 63785 49.35 49.35 1 2.1178 2.2836 0 34188000 12452000 21736000 1397 1207 532 545 2200 2200 AGYPQYVSEILEK 13 1 0 Unmodified _AGYPQYVSEILEK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.8931 2 748.885207 1495.75586 70541.44 0.76642 0.00057396 -0.31709 -0.00023747 0.44933 0.0003365 749.386383372224 752.892219198065 102.99 0.89553 102.99 102.41 103.31 0 313 71 7 0 0 0 0.00013091 3 64927 79.659 79.659 1 2.0514 2.1926 0 23081000 7850500 15230000 1398 1207 532 545 2201;2202;2203 2201 AGYPQYVSEILEK 13 1 0 Unmodified _AGYPQYVSEILEK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.8862 2 748.885207 1495.75586 70823.83 1.1654 0.00087274 0.036616 2.7421E-05 1.202 0.00090016 748.88508643631 752.89220335239 115.89 0.73999 115.89 115.53 116.27 0 125 32 6 0 0 0 0.0067183 1 67935 45.879 43.027 1 0.99847 0.80106 0 7592000 3349600 4242400 1399 1207 532 545 2204 2204 AGYPQYVSEILEK 13 1 0 Unmodified _AGYPQYVSEILEK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 749.3869 2 748.885207 1495.75586 71299.71 0.73621 0.00055134 0.066076 4.9484E-05 0.80229 0.00060082 748.884754841582 752.892504950814 115.76 0.74974 115.76 115.41 116.16 7.6294E-06 152 35 7 0 0 0 0.028701 2 66873 33.87 32.329 1 0.91846 0.75397 0 5207800 2210600 2997200 1400 1207 532 545 2205;2206 2206 AGYSTDESSSSSLHATR 17 0 1 Unmodified _AGYSTDESSSSSLHATR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.3973 2 878.392644 1754.77073 64679.52 0.77772 0.00068314 0.68057 0.00059781 1.4583 0.001281 878.393308301016 883.396658299731 22.411 0.24478 22.411 22.298 22.543 0 74 15 7 0 0 0 7.1332E-13 2 8472 120.87 114.21 1 0.9661 1.0103 0 13036000 6927700 6108800 1401 1593 533 546 2207;2208 2208 AGYSTDESSSSSLHATR 17 0 1 Unmodified _AGYSTDESSSSSLHATR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.3008 3 585.930855 1754.77073 79318.85 0.76708 0.00044946 0.016007 9.379E-06 0.78309 0.00045884 585.931020505791 589.267021909878 22.405 0.29354 22.405 22.281 22.575 0 113 18 8 0 0 0 0.0060621 1 8486 41.513 39.332 1 1.2657 1.3008 0 25370000 12090000 13280000 1402 1593 533 546 2209 2209 AGYSTDESSSSSLHATR 17 0 1 Unmodified _AGYSTDESSSSSLHATR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.3961 2 878.392644 1754.77073 65660.1 0.45839 0.00040264 0.15548 0.00013657 0.61386 0.00053921 878.393271063744 883.39656258089 22.189 0.30601 22.189 22.061 22.367 0 58 14 6 0 0 0 3.6053E-09 2 8216 106.32 99.664 1 1.1147 1.1178 0 17826000 8164300 9661200 1403 1593 533 546 2210;2211 2210 AGYSTDESSSSSLHATR 17 0 1 Unmodified _AGYSTDESSSSSLHATR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.3006 3 585.930855 1754.77073 78369.65 0.58186 0.00034093 -0.41455 -0.0002429 0.16731 9.8033E-05 585.930674397811 589.266528728919 22.183 0.3472 22.183 22.041 22.388 0 87 16 8 0 0 0 0.020261 1 8266 32.981 30.594 1 1.2129 1.3106 0 26724000 12635000 14089000 1404 1593 533 546 2212 2212 AGYSTDESSSSSLHATR 17 0 1 Unmodified _AGYSTDESSSSSLHATR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.2678 3 585.930855 1754.77073 78757.59 0.41509 0.00024322 -0.089232 -5.2284E-05 0.32586 0.00019093 585.930857984078 589.267013615892 25.362 0.34938 25.362 25.176 25.525 0 107 15 10 0 0 0 0.024877 1 9174 31.04 31.04 1 1.1457 0.97613 0 8975200 3991200 4984000 1405 1593 533 546 2213 2213 AGYSTDESSSSSLHATR 17 0 1 Unmodified _AGYSTDESSSSSLHATR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 883.3955 2 878.392644 1754.77073 64854.16 0.39182 0.00034417 0.030648 2.6921E-05 0.42247 0.00037109 878.392732505121 883.396596071967 25.351 0.30017 25.351 25.198 25.498 0 64 13 7 0 0 0 0.020576 1 9206 24.964 24.964 1 1.1062 0.96767 0 1858900 1009800 849130 1406 1593 533 546 2214 2214 AGYSTDESSSSSLHATR 17 0 1 Unmodified _AGYSTDESSSSSLHATR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.9312 3 585.930855 1754.77073 78805.79 0.55845 0.00032722 -0.31478 -0.00018444 0.24367 0.00014277 585.93069687656 589.266789281048 25.507 0.38207 25.507 25.331 25.713 0 110 16 9 0 0 0 0.00019917 1 8781 36.481 35.087 1 1.1797 0.98359 0 6434100 2740300 3693900 1407 1593 533 546 2215 2215 AHAFAVQQK 9 1 0 Unmodified _AHAFAVQQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.273 2 500.272158 998.529764 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.33 1 19.33 18.83 19.83 0 0 0 0 0.0020593 1 6022 88.029 58.691 1 1408 1754 534 547 2216 2216 AHAFAVQQK 9 1 0 Unmodified _AHAFAVQQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2721 2 500.272158 998.529764 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.412 1 19.412 18.912 19.912 0 0 0 0 2.3906E-11 1 6083 134.66 114.11 1 1409 1754 534 547 2217 2217 AHAFAVQQK 9 1 0 Unmodified _AHAFAVQQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.2787 2 500.272158 998.529764 86247.7 -0.27058 -0.00013536 0.32862 0.0001644 0.058037 2.9034E-05 500.272252357041 504.279264721799 19.207 0.17439 19.207 19.135 19.31 1.9073E-06 15 5 4 0 0 0 6.6352E-12 2 5692 157.99 157.99 1 1.4449 1.4887 0 25160000 9578500 15582000 1410 1754 534 547 2218;2219 2218 AHAIITLGK 9 1 0 Unmodified _AHAIITLGK_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.287 2 462.287277 922.560001 88250.32 0.64546 0.00029839 0.21788 0.00010072 0.86334 0.00039911 462.287326429105 466.294380400513 41.272 0.46792 41.272 40.993 41.461 -3.8147E-06 179 38 6 0 0 0 0.0010214 1 21684 105.14 74.911 1 0.91236 0.99391 0 49497000 26514000 22983000 1411 1565 535 548 2220 2220 AHAIITLGK 9 1 0 Unmodified _AHAIITLGK_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2943 2 462.287277 922.560001 89020.27 0.59198 0.00027367 0.013199 6.1015E-06 0.60518 0.00027977 462.287184523058 466.294276369853 39.654 0.40257 39.654 39.477 39.88 0 144 32 6 0 0 0 0.00068897 1 21004 95.741 71.769 1 0.82681 0.92437 0 104970000 46452000 58520000 1412 1565 535 548 2221 2221 AHAIITLGK 9 1 0 Unmodified _AHAIITLGK_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 466.2941 2 462.287277 922.560001 90087.59 0.12407 5.7356E-05 -0.12078 -5.5833E-05 0.0032929 1.5223E-06 462.287107129208 466.294288539725 46.362 0.51554 46.362 46.122 46.638 0 169 34 7 0 0 0 0.00068897 1 22271 95.741 82.745 1 1.9692 1.5725 0 9206100 2952000 6254100 1413 1565 535 548 2222 2222 AHAIITLGK 9 1 0 Unmodified _AHAIITLGK_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.2946 2 462.287277 922.560001 88529.01 0.1041 4.8124E-05 0.0031288 1.4464E-06 0.10723 4.9571E-05 462.287194362254 466.29431544584 45.98 0.71319 45.98 45.607 46.32 -3.8147E-06 201 48 7 0 0 0 0.0013017 1 21475 87.181 77.044 1 1.7337 1.4233 0 9229800 3265400 5964400 1414 1565 535 548 2223 2223 AHEPTYFTVDCAEAGQGDVSIGIK 24 1 0 Unmodified _AHEPTYFTVDCAEAGQGDVSIGIK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 856.0702 3 855.735716 2564.18532 64440.14 0.73013 0.00062479 -0.025269 -2.1624E-05 0.70486 0.00060317 856.403550861978 858.741460882407 107.09 0.40833 107.09 106.9 107.31 7.6294E-06 109 25 8 0 0 0 0.041422 2 61319 11.523 11.315 1 2.6652 2.0996 0 5660800 1174300 4486500 1415 1504 536 549 2224;2225 2225 AHEPTYFTVDCAEAGQGDVSIGIK 24 1 0 Unmodified _AHEPTYFTVDCAEAGQGDVSIGIK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.7415 3 855.735716 2564.18532 65135.15 0.64612 0.00055291 -0.065794 -5.6302E-05 0.58032 0.0004966 856.0698322058 858.40771325844 106.91 0.3942 106.91 106.72 107.11 0 104 22 7 0 0 0 0.013139 1 60243 20.482 20.482 1 3.6658 2.9924 0 5672800 1264800 4408000 1416 1504 536 549 2226 2226 AHEVGAQGGPPVAQVEQDLPISR 23 0 1 Unmodified _AHEVGAQGGPPVAQVEQDLPISR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.0758 3 785.7399 2354.19787 71968.55 0.58806 0.00046206 0.0257 2.0194E-05 0.61376 0.00048226 786.074062013316 789.409760243654 89.19 0.4166 89.19 88.905 89.321 0 82 34 5 0 0 0 1.0407E-08 1 55080 61.04 61.04 1 0.61778 0.67551 0 35245000 22848000 12397000 1417 1738 537 550 2227 2227 AHEVGAQGGPPVAQVEQDLPISR 23 0 1 Unmodified _AHEVGAQGGPPVAQVEQDLPISR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 786.4099 3 785.7399 2354.19787 69252.54 0.44558 0.00035011 0.30836 0.00024229 0.75394 0.0005924 786.074489548944 789.410689035703 103.08 0.51441 103.08 102.76 103.27 7.6294E-06 145 34 6 0 0 0 0.0013494 2 57654 25.213 25.213 1 1.0536 0.91883 0 3524000 1654200 1869800 1418 1738 537 550 2228;2229 2228 AHFLQLR 7 0 1 Unmodified _AHFLQLR_ 0 0 0 Q8IUF8 Q8IUF8 Q8IUF8 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.759 2 442.758687 883.502821 NaN NaN NaN 0.14198 6.2862E-05 NaN NaN NaN NaN 44.045 0.40767 44.045 43.929 44.337 0 0 0 0 0.03244 1 24027 66.994 54.609 1 NaN NaN 0 8497500 8497500 0 1419 1891 538 551 2230 2230 AHFQNFPNGVTDFIK 15 1 0 Unmodified _AHFQNFPNGVTDFIK_ 0 0 0 A0A024RAM0;Q92973;B4DSC0;E7EW37 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.6307 3 578.958128 1733.85255 NaN NaN NaN 0.72008 0.0004169 NaN NaN NaN NaN 96.354 0.39265 96.354 96.124 96.517 0 0 0 0 0.041721 1 60033 27.133 15.613 1 NaN NaN 0 5248200 0 5248200 1420 309 539 552 2231 2231 AHGLLAEENR 10 0 1 Unmodified _AHGLLAEENR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.2925 2 555.288537 1108.56252 81699.59 0.55914 0.00031049 -0.30189 -0.00016764 0.25725 0.00014285 555.288494919709 560.292441398485 24.167 0.45787 24.167 23.936 24.393 0 90 20 8 0 0 0 5.4662E-08 3 9942 114.89 88.723 1 0.81272 0.86468 0 43085000 24097000 18988000 1421 186;1747 540 553 2232;2233;2234 2232 AHGLLAEENR 10 0 1 Unmodified _AHGLLAEENR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.2925 2 555.288537 1108.56252 81840.18 0.43219 0.00023999 0.32299 0.00017935 0.75518 0.00041934 555.288878754655 560.292524830326 23.61 0.38206 23.61 23.435 23.818 0 62 15 7 0 0 0 2.8741E-08 1 9437 120.12 96.691 1 0.77172 0.89135 0 55788000 32678000 23111000 1422 186;1747 540 553 2235 2235 AHGLLAEENR 10 0 1 Unmodified _AHGLLAEENR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.2922 2 555.288537 1108.56252 81084.07 0.25193 0.0001399 0.053317 2.9607E-05 0.30525 0.0001695 555.288759019528 560.292542545816 26.091 0.50949 26.091 25.848 26.357 0 115 20 9 0 0 0 0.00072198 2 9701 82.287 58.858 1 1.3078 1.1048 0 9555300 4301100 5254200 1423 186;1747 540 553 2236;2237 2237 AHGLLAEENR 10 0 1 Unmodified _AHGLLAEENR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.2921 2 555.288537 1108.56252 80698.25 0.5314 0.00029508 -0.013013 -7.226E-06 0.51839 0.00028785 555.288712356597 560.292517798329 25.932 0.5439 25.932 25.626 26.17 0 93 21 8 0 0 0 0.0011058 2 9091 76.1 57.006 1 1.4963 1.2221 0 9287600 3896500 5391100 1424 186;1747 540 553 2238;2239 2238 AHINLVR 7 0 1 Unmodified _AHINLVR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.7506 2 411.750862 821.487171 93915.88 0.015286 6.2941E-06 0.26705 0.00010996 0.28234 0.00011625 411.750785118747 416.755050739728 27.041 0.5423 27.041 26.876 27.418 0 113 27 6 0 0 0 0.010959 2 12383 109.7 31.76 1 1.1961 1.2766 0 44324000 18033000 26292000 1425 907 541 554 2240;2241 2241 AHINLVR 7 0 1 Unmodified _AHINLVR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.7509 2 411.750862 821.487171 94883.94 0.36179 0.00014897 0.78595 0.00032362 1.1477 0.00047258 411.751175463788 416.75517305998 26.15 0.797 26.15 25.607 26.404 0 122 48 7 0 0 0 0.01026 2 11589 124.32 33.385 1 1.163 1.344 0 69471000 32653000 36818000 1426 907 541 554 2242;2243 2243 AHINLVR 7 0 1 Unmodified _AHINLVR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 416.7551 2 411.750862 821.487171 94348.17 -0.3194 -0.00013151 0.55662 0.00022919 0.23722 9.7674E-05 411.750889027219 416.755128867447 29.743 0.71756 29.743 29.316 30.034 -1.9073E-06 219 51 6 0 0 0 0.058778 1 12157 51.036 19.458 1 1.1973 1.0102 0 4756100 2274500 2481700 1427 907 541 554 2244 2244 AHINLVR 7 0 1 Unmodified _AHINLVR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 411.7506 2 411.750862 821.487171 92773.98 -0.62065 -0.00025555 0.70992 0.00029231 0.089271 3.6758E-05 411.750972595486 416.755224505224 29.333 0.68069 29.333 29.013 29.694 0 144 40 6 0 0 0 0.056179 1 11392 52.231 27.727 1 1.2438 1.0293 0 7987200 3410800 4576400 1428 907 541 554 2245 2245 AHIQSLFSFITGTK 14 1 0 Unmodified _AHIQSLFSFITGTK_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;E7ENS2;E7EPR4;E7ET29 A0A024R570 A0A024R570 MEN1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 779.43 2 775.422291 1548.83003 75579.92 0.83462 0.00064718 -0.38359 -0.00029744 0.45103 0.00034974 775.421486156398 779.429112546127 124.49 0.37598 124.49 124.28 124.65 7.6294E-06 52 16 6 0 0 0 0.034215 1 73722 29.936 29.936 1 1.2912 1.1316 0 1298900 685650 613260 1429 171 542 555 2246 2246 AHLALEEDLNSEFR 14 0 1 Unmodified _AHLALEEDLNSEFR_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.9421 3 548.605643 1642.7951 82357.2 0.75687 0.00041522 -0.1268 -6.9561E-05 0.63007 0.00034566 548.939844553769 551.941653740993 83.714 0.55274 83.714 83.311 83.864 0 211 42 7 0 0 0 6.7247E-05 2 51379 66.708 66.708 1 0.93529 1.0243 0 31072000 13749000 17323000 1430 672 543 556 2247;2248 2248 AHLALEEDLNSEFR 14 0 1 Unmodified _AHLALEEDLNSEFR_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.4067 2 822.404826 1642.7951 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.724 1 83.724 83.224 84.224 0 0 0 0 0.012538 1 51343 49.5 14.613 1 1431 672 543 556 2249 2249 AHLALEEDLNSEFR 14 0 1 Unmodified _AHLALEEDLNSEFR_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.8227 3 548.605643 1642.7951 82357.25 0.93474 0.0005128 0.54472 0.00029884 1.4795 0.00081164 548.606285009783 552.276068863837 83.89 0.31497 83.89 83.846 84.16 0 102 27 7 0 0 0 0.0052863 1 51488 35.487 30.059 1 0.67772 0.74442 0 40493000 23195000 17298000 1432 672 543 556 2250 2250 AHLALEEDLNSEFR 14 0 1 Unmodified _AHLALEEDLNSEFR_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.9422 3 548.605643 1642.7951 80728.52 0.78197 0.000429 -0.95516 -0.00052401 -0.17319 -9.5011E-05 548.605660381191 551.9418104931 96.871 0.97297 96.871 96.5 97.473 0 245 50 10 0 0 0 0.018323 2 54285 23.956 23.956 1 1.1114 0.95597 0 7648600 3780400 3868100 1433 672 543 556 2251;2252 2251 AHLALEEDLNSEFR 14 0 1 Unmodified _AHLALEEDLNSEFR_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.9405 3 548.605643 1642.7951 NaN NaN NaN 0.094604 5.19E-05 NaN NaN NaN NaN 96.534 0.57711 96.534 96.286 96.863 0 0 0 0 0.031652 1 53338 30.483 25.935 1 NaN NaN 0 3494200 0 3494200 1434 672 543 556 2253 2253 AHLFDLNCK 9 1 0 Unmodified _AHLFDLNCK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.2838 2 559.276583 1116.53861 82010.81 0.41448 0.00023181 -0.098157 -5.4897E-05 0.31632 0.00017691 559.276682571868 563.283504619813 59.747 0.44422 59.747 59.597 60.041 0 97 29 5 0 0 0 0.04753 1 30520 39.022 39.022 1 1.8361 1.5312 0 1784600 615970 1168600 1435 2002 544 557 2254 2254 AHLFDLNCK 9 1 0 Unmodified _AHLFDLNCK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.2844 2 559.276583 1116.53861 NaN NaN NaN -0.015176 -8.4876E-06 NaN NaN NaN NaN 59.887 0.57606 59.887 59.569 60.145 0 0 0 0 0.012937 1 29957 64.42 47.035 1 NaN NaN 0 1093200 0 1093200 1436 2002 544 557 2255 2255 AHLGLEEQLR 10 0 1 Unmodified _AHLGLEEQLR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.2156 3 389.21565 1164.62512 97858.5 -0.017177 -6.6855E-06 -0.14656 -5.7044E-05 -0.16374 -6.3729E-05 389.215601288213 392.551560188491 46.065 0.34837 46.065 45.869 46.218 0 91 28 5 0 0 0 0.00060148 1 25353 56.432 41.738 1 0.73327 0.72228 0 13173000 7057600 6115900 1437 162 545 558 2256 2256 AHLGTALK 8 1 0 Unmodified _AHLGTALK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 409.752 2 405.745245 809.475937 NaN NaN NaN -1.7566 -0.00071273 NaN NaN NaN NaN 21.412 2.1045 21.412 21.166 23.271 0 0 0 0 0.0033144 1 7594 98.997 38.237 1 NaN NaN 0 1100800000 0 1100800000 1438 744 546 559 2257 2257 AHLGTALK 8 1 0 Unmodified _AHLGTALK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.745 2 405.745245 809.475937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.248 1 21.248 20.748 21.748 0 0 0 0 6.3083E-07 1 7574 138.55 46.643 1 1439 744 546 559 2258 2258 AHLGTALK 8 1 0 Unmodified _AHLGTALK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.7451 2 405.745245 809.475937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.091 1 22.091 21.591 22.591 0 0 0 0 0.0062381 1 8240 81.89 24.419 1 1440 744 546 559 2259 2259 AHLGTALK 8 1 0 Unmodified _AHLGTALK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 405.7456 2 405.745245 809.475937 93165.53 -0.12485 -5.0658E-05 -2.2609 -0.00091735 -2.3857 -0.000968 405.745646933986 409.751467556179 20.932 1.5976 20.932 20.665 22.263 1.9073E-06 309 73 10 0 0 0 9.4278E-09 3 7068 153.73 56.124 1 0.71483 0.84682 0 2871600000 1710100000 1161500000 1441 744 546 559 2260;2261;2262 2261 AHLGTALK 8 1 0 Unmodified _AHLGTALK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 405.7455 2 405.745245 809.475937 NaN NaN NaN 0.50248 0.00020388 NaN NaN NaN NaN 22.522 2.3419 22.522 22.309 24.65 0 0 0 0 8.9864E-14 1 7198 150.17 42.736 1 NaN NaN 0 219120000 219120000 0 1442 744 546 559 2263 2263 AHLGTALK 8 1 0 Unmodified _AHLGTALK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 405.7456 2 405.745245 809.475937 92887.3 -0.49999 -0.00020287 -1.768 -0.00071734 -2.2679 -0.00092021 405.745688610153 409.751344851334 22.218 3.6192 22.218 22.007 25.626 0 592 181 10 0 0 0 9.4145E-07 3 6564 150.17 42.736 1 1.6829 1.4737 0 514750000 191140000 323610000 1443 744 546 559 2264;2265;2266 2265 AHLMEIQVNGGTVAEK 16 1 0 Oxidation (M) _AHLM(ox)EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(184.11)EIQVNGGTVAEK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.4372 2 856.935436 1711.85632 65671.34 0.8134 0.00069703 -0.14234 -0.00012198 0.67106 0.00057505 856.935417851872 860.942480659369 47.586 0.51099 47.586 47.28 47.791 0 244 43 8 0 0 0 2.7706E-57 1 25721 184.11 184.11 1 1.2744 1.4526 0 173610000 78280000 95333000 1444 1554;936 547 560 2267 2267 763 AHLMEIQVNGGTVAEK 16 1 0 Oxidation (M) _AHLM(ox)EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(88.77)EIQVNGGTVAEK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.6264 3 571.62605 1711.85632 77563.47 0.72488 0.00041436 -0.46184 -0.000264 0.26304 0.00015036 571.62628114761 574.296986011865 47.586 0.83876 47.586 47.214 48.053 0 447 73 11 0 0 0 9.0478E-07 2 25772 88.768 88.768 1 1.4231 1.6931 0 604380000 260030000 344350000 1445 1554;936 547 560 2268;2269 2269 763 AHLMEIQVNGGTVAEK 16 1 0 Oxidation (M) _AHLM(ox)EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(173.72)EIQVNGGTVAEK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 860.9406 2 856.935436 1711.85632 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.377 1 47.377 46.877 47.877 0 0 0 0 7.3314E-62 1 25686 173.72 148.86 1 1446 1554;936 547 560 2270 2270 763 AHLMEIQVNGGTVAEK 16 1 0 Oxidation (M) _AHLM(ox)EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(169.79)EIQVNGGTVAEK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.4432 2 856.935436 1711.85632 66104.44 0.48047 0.00041173 -0.23533 -0.00020167 0.24513 0.00021006 856.935274146989 860.942395236352 45.963 0.47746 45.963 45.777 46.255 0 271 39 10 0 0 0 5.1035E-45 2 25208 169.79 169.79 1 1.3795 1.6064 0 245680000 103880000 141800000 1447 1554;936 547 560 2271;2272 2271 763 AHLMEIQVNGGTVAEK 16 1 0 Oxidation (M) _AHLM(ox)EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(109.79)EIQVNGGTVAEK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.297 3 571.62605 1711.85632 NaN NaN NaN -2.2592 -0.0012914 NaN NaN NaN NaN 46.053 0.84663 46.053 45.647 46.494 0 0 0 0 1.9161E-12 2 25196 109.79 86.802 1 NaN NaN 0 211230000 0 211230000 1448 1554;936 547 560 2273;2274 2273 763 AHLMEIQVNGGTVAEK 16 1 0 Oxidation (M) _AHLM(ox)EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(76.15)EIQVNGGTVAEK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.6259 3 571.62605 1711.85632 NaN NaN NaN -0.14324 -8.1879E-05 NaN NaN NaN NaN 45.962 0.83288 45.962 45.752 46.585 -3.8147E-06 0 0 0 0.00011978 1 25197 76.151 63.359 1 NaN NaN 0 283540000 283540000 0 1449 1554;936 547 560 2275 2275 763 AHLMEIQVNGGTVAEK 16 1 0 Oxidation (M) _AHLM(ox)EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(52.58)EIQVNGGTVAEK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.9432 2 856.935436 1711.85632 64688.88 0.6395 0.00054801 -0.31222 -0.00026755 0.32728 0.00028046 857.436439657948 860.942098370284 55.012 0.74865 55.012 54.732 55.481 0 162 31 8 0 0 0 0.00017293 1 27493 52.576 52.576 1 0.84196 0.67096 0 6786800 3731100 3055800 1450 1554;936 547 560 2276 2276 763 AHLMEIQVNGGTVAEK 16 1 0 Unmodified _AHLMEIQVNGGTVAEK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 852.9473 2 848.937979 1695.8614 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.239 1 75.239 74.739 75.739 0 0 0 0 0.0036074 1 40018 53.754 38.182 1 1451 1554;936 547 561 2277 2277 AHLMEIQVNGGTVAEK 16 1 0 Unmodified _AHLMEIQVNGGTVAEK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 852.9453 2 848.937979 1695.8614 65738.32 0.50083 0.00042517 -0.44183 -0.00037508 0.058998 5.0085E-05 848.937557639218 852.945181818556 75.452 0.40312 75.452 75.204 75.608 0 128 31 6 0 0 0 0.00032586 3 39355 54.023 54.023 1 1.0754 0.87358 0 2898300 1312600 1585700 1452 1554;936 547 561 2278;2279;2280 2280 AHLMEIQVNGGTVAEK 16 1 0 Unmodified _AHLMEIQVNGGTVAEK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.2945 3 566.294411 1695.8614 78114.57 0.39465 0.00022349 -0.0096297 -5.4533E-06 0.38502 0.00021803 566.628750177759 568.965537395104 75.426 0.77774 75.426 74.974 75.752 0 175 56 6 0 0 0 2.6307E-05 1 39301 62.861 62.861 1 1.0767 0.88112 0 8450100 2759800 5690300 1453 1554;936 547 561 2281 2281 AHLTNQYMQR 10 0 1 Oxidation (M) _AHLTNQYM(ox)QR_ AHLTNQYM(1)QR AHLTNQYM(82.64)QR 0 1 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 429.8763 3 426.540028 1276.59825 89575.06 -0.36605 -0.00015614 0.077931 3.3241E-05 -0.28812 -0.00012289 426.540353530383 429.876198110522 17.298 0.42437 17.298 17.132 17.557 0 44 13 5 0 0 0 0.00017727 1 4242 82.645 62.883 1 2.7481 2.7799 0 9574600 2286100 7288500 1454 818 548 562 2282 2282 651 AHLTNQYMQR 10 0 1 Oxidation (M) _AHLTNQYM(ox)QR_ AHLTNQYM(1)QR AHLTNQYM(40)QR 0 1 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8085 2 639.306403 1276.59825 77364.23 0.37405 0.00023913 -0.051137 -3.2692E-05 0.32292 0.00020644 639.306453788331 644.310540530558 17.304 0.35335 17.304 17.132 17.486 0 42 10 7 0 0 0 0.017906 1 4251 40.002 32.076 1 2.8278 2.86 0 19927000 5300600 14626000 1455 818 548 562 2283 2283 651 AHLWQK 6 1 0 Unmodified _AHLWQK_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 395.726 2 391.71903 781.423508 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.861 1 20.861 20.361 21.361 0 0 0 0 0.029222 1 7115 82.141 53.967 1 1456 1854 549 563 2284 2284 AHNNELEPTPGNTLR 15 0 1 Unmodified _AHNNELEPTPGNTLR_ 0 0 0 P24928;A0A087WWE2 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.2797 3 554.944659 1661.81215 NaN NaN NaN 0.052485 2.9126E-05 NaN NaN NaN NaN 37.101 0.30088 37.101 36.924 37.225 3.8147E-06 0 0 0 0.030458 1 19209 29.129 24.499 1 NaN NaN 0 6420600 0 6420600 1457 1514 550 564 2285 2285 AHPVAVASK 9 1 0 Unmodified _AHPVAVASK_ 0 0 0 A0A0A0MS90;A8K654;B4DI41;Q9UIS9;B4DUR3 A0A0A0MS90 A0A0A0MS90 MBD1 Methyl-CpG-binding domain protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.2555 2 440.255977 878.497401 88579.26 -0.26085 -0.00011484 -0.28962 -0.00012751 -0.55047 -0.00024235 440.2557978745 444.262880367642 15.334 0.82386 15.334 15.239 16.063 -9.5367E-07 169 60 8 0 0 0 0.016787 1 3000 53.554 22.942 1 0.57725 0.63838 0 45142000 28420000 16723000 1458 477 551 565 2286 2286 AHQANQLYPFAISLIESVR 19 0 1 Unmodified _AHQANQLYPFAISLIESVR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.3932 3 719.719889 2156.13784 74644.27 0.8697 0.00062594 1.5867 0.001142 2.4564 0.001768 719.719866186743 723.391778850276 132.7 0.4127 132.7 132.54 132.95 0 69 22 7 0 0 0 6.9705E-06 2 86748 60.334 53.732 1 1.3817 1.4347 0 5585100 2371100 3214000 1459 1729 552 566 2287;2288 2288 AHQILVLQEGK 11 1 0 Unmodified _AHQILVLQEGK_ 0 0 0 Q9UMW6;Q9UQ60;Q5JNW1;A0A0G2JLV0;A0A087WYD6;X5CMH5;Q59H06;Q03519;Q96P38 Q9UMW6 Q9UMW6 TAP2-G;TAP2 Antigen peptide transporter 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3591 2 618.358962 1234.70337 79449.72 0.20459 0.00012651 0.19548 0.00012088 0.40007 0.00024739 618.359034613448 622.366241073569 46.112 0.4024 46.112 45.882 46.284 -3.8147E-06 90 32 4 0 0 0 0.006555 1 25405 54.198 46.631 1 1.0663 1.0882 0 17186000 7720100 9466300 1460 433 553 567 2289 2289 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;C4TNW6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.3918 2 820.391187 1638.76782 66442.78 0.59328 0.00048672 0.0097867 8.029E-06 0.60307 0.00049475 820.391188446006 824.398242305783 78.354 0.91988 78.354 78.111 79.03 0 448 80 8 0 0 0 4.3144E-57 2 46456 189.33 189.33 1 1.2581 1.412 0 67246000 30186000 37060000 1461 1632;343;1633 554 568 2290;2291 2291 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;C4TNW6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.9348 3 547.263217 1638.76782 81849.16 0.54564 0.00029861 -0.1802 -9.8616E-05 0.36544 0.00019999 547.263224720839 549.934425893229 78.295 1.2652 78.295 77.702 78.967 7.6294E-06 601 106 9 0 0 0 5.872E-07 2 46335 85.837 85.837 1 1.3207 1.4915 0 81212000 34443000 46769000 1462 1632;343;1633 554 568 2292;2293 2292 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;C4TNW6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.3987 2 820.391187 1638.76782 67356.03 0.44634 0.00036617 0.38224 0.00031359 0.82858 0.00067976 820.892878418528 824.398592622238 76.162 1.0892 76.162 75.705 76.794 0 622 91 8 0 0 0 1.5889E-30 4 46197 162.22 162.22 1 1.3219 1.4831 0 77393000 32935000 44457000 1463 1632;343;1633 554 568 2294;2295;2296;2297 2296 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;C4TNW6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.9357 3 547.263217 1638.76782 81287.41 0.19192 0.00010503 0.22202 0.0001215 0.41394 0.00022653 547.263355478532 549.934640045328 76.208 1.2044 76.208 75.656 76.86 0 679 101 8 0 0 0 3.4769E-05 2 45695 64.244 64.244 1 1.3173 1.4717 0 89202000 38886000 50316000 1464 1632;343;1633 554 568 2298;2299 2298 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;C4TNW6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 824.3976 2 820.391187 1638.76782 66723.1 0.80967 0.00066424 -0.13634 -0.00011185 0.67332 0.00055239 820.391137526343 824.398134890913 88.063 1.1574 88.063 87.775 88.933 -7.6294E-06 435 72 11 0 0 0 6.5668E-05 4 48395 90.697 90.697 1 2.4704 2.1007 0 62360000 18340000 44021000 1465 1632;343;1633 554 568 2300;2301;2302;2303 2300 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;C4TNW6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.9346 3 547.263217 1638.76782 81140.06 0.59033 0.00032306 -0.14937 -8.1744E-05 0.44096 0.00024132 547.26323081636 549.934526710987 88.066 1.1425 88.066 87.775 88.918 0 390 71 10 0 0 0 2.2079E-10 2 48431 100.11 100.11 1 2.2496 1.8865 0 52198000 17030000 35168000 1466 1632;343;1633 554 568 2304;2305 2304 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;C4TNW6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.3909 2 820.391187 1638.76782 66326.73 0.69387 0.00056924 -0.34254 -0.00028102 0.35133 0.00028823 820.390990078904 824.397997495324 87.956 1.3066 87.956 87.49 88.796 0 434 76 12 0 0 0 1.6262E-09 3 47537 119.39 118.13 1 2.3409 1.9841 0 63746000 18357000 45390000 1467 1632;343;1633 554 568 2306;2307;2308 2307 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;C4TNW6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.2632 3 547.263217 1638.76782 81224.71 0.48401 0.00026488 -0.10257 -5.6132E-05 0.38144 0.00020875 547.263303097111 549.934538758827 87.986 1.1166 87.986 87.663 88.78 0 370 64 10 0 0 0 9.0432E-06 2 47555 76.759 76.759 1 2.2646 1.8902 0 42376000 13160000 29216000 1468 1632;343;1633 554 568 2309;2310 2310 AHSGAQGLLAAQK 13 1 0 Unmodified _AHSGAQGLLAAQK_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.344 2 626.343843 1250.67313 78512.49 0.97929 0.00061337 -0.26556 -0.00016633 0.71373 0.00044704 626.343674516173 630.350789442691 25.963 0.20132 25.963 25.862 26.063 1.9073E-06 45 11 7 0 0 0 2.4426E-13 1 11503 127.51 127.51 1 2.4719 2.5971 0 19647000 5685900 13961000 1469 1293 555 569 2311 2311 AHSIQIMK 8 1 0 Unmodified _AHSIQIMK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2586 2 464.257662 926.500772 89500.95 0.38728 0.0001798 -0.40286 -0.00018703 -0.015571 -7.2289E-06 464.257262282436 468.264602089624 28.268 0.28445 28.268 28.157 28.441 0 48 19 4 0 0 0 0.0057275 1 13277 89.55 48.048 1 0.6033 0.60096 0 26287000 15559000 10728000 1470 1003 556 570 2312 2312 AHSIQIMK 8 1 0 Unmodified _AHSIQIMK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2572 2 464.257662 926.500772 88348.63 0.085825 3.9845E-05 1.1462 0.00053212 1.232 0.00057197 464.257700468321 468.266037844009 27.292 0.41739 27.292 27.087 27.505 0 59 21 4 0 0 0 0.0014375 1 12564 109.01 66.538 1 0.58027 0.63244 0 39928000 26297000 13631000 1471 1003 556 570 2313 2313 AHSIQIMK 8 1 0 Unmodified _AHSIQIMK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 464.2579 2 464.257662 926.500772 86614.8 0.099329 4.6114E-05 0.35879 0.00016657 0.45812 0.00021268 464.257690063383 468.264880920098 31.099 0.56984 31.099 30.85 31.42 0 128 29 6 0 0 0 0.0035323 2 12527 96.492 54.989 1 1.1935 0.98485 0 11200000 4844900 6355000 1472 1003 556 570 2314;2315 2315 AHSIQIMK 8 1 0 Oxidation (M) _AHSIQIM(ox)K_ AHSIQIM(1)K AHSIQIM(109.01)K 0 1 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 M0R117 M0R117 RPL18A 60S ribosomal protein L18a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.2618 2 472.25512 942.495686 NaN NaN NaN -0.81452 -0.00038466 NaN NaN NaN NaN 20.087 0.32829 20.087 19.966 20.295 -1.9073E-06 0 0 0 0.00068095 1 6562 109.01 71.992 1 NaN NaN 0 175830000 0 175830000 1473 1003 556 571 2316 2316 794 AHSIQIMK 8 1 0 Oxidation (M) _AHSIQIM(ox)K_ AHSIQIM(1)K AHSIQIM(169.26)K 0 1 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.2547 2 472.25512 942.495686 82768.61 -0.080358 -3.7949E-05 -0.4661 -0.00022012 -0.54646 -0.00025807 472.25507942788 476.261931367268 19.862 0.69238 19.862 19.689 20.381 0 103 26 8 0 0 0 2.2189E-14 2 6155 169.26 99.353 1 1.5383 1.812 0 518930000 201460000 317470000 1474 1003 556 571 2317;2318 2318 794 AHSIQIMK 8 1 0 Oxidation (M) _AHSIQIM(ox)K_ AHSIQIM(1)K AHSIQIM(54.16)K 0 1 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.4667 1 943.502963 942.495686 61768.9 0.24641 0.00023249 -0.28545 -0.00026932 -0.039043 -3.6837E-05 943.502512386415 951.51719746715 19.853 0.33396 19.853 19.739 20.073 0 42 13 6 0 0 0 0.01618 1 6147 54.157 39.382 1 1.8098 1.9849 0 41065000 14534000 26530000 1475 1003 556 571 2319 2319 794 AHSIQIMK 8 1 0 Oxidation (M) _AHSIQIM(ox)K_ AHSIQIM(1)K AHSIQIM(60.9)K 0 1 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 476.2622 2 472.25512 942.495686 88056.17 0.069509 3.2826E-05 1.1034 0.00052108 1.1729 0.00055391 472.255189231752 476.262233021438 31.441 0.52869 31.441 31.2 31.728 -1.9073E-06 114 32 6 0 0 0 0.0081157 1 13307 60.895 42.165 1 1.3548 1.0676 0 5610600 2566200 3044300 1476 1003 556 571 2320 2320 794 AHSIQIMK 8 1 0 Oxidation (M) _AHSIQIM(ox)K_ AHSIQIM(1)K AHSIQIM(143.89)K 0 1 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 M0R117 M0R117 RPL18A 60S ribosomal protein L18a ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 472.2549 2 472.25512 942.495686 NaN NaN NaN 0.30884 0.00014585 NaN NaN NaN NaN 21.312 0.38356 21.312 21.207 21.591 0 0 0 0 5.7123E-14 1 6363 143.89 103.68 1 NaN NaN 0 22977000 22977000 0 1477 1003 556 571 2321 2321 794 AHSIQIMK 8 1 0 Oxidation (M) _AHSIQIM(ox)K_ AHSIQIM(1)K AHSIQIM(93.2)K 0 1 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 476.2623 2 472.25512 942.495686 89173.84 0.1948 9.1996E-05 -0.74086 -0.00034987 -0.54605 -0.00025788 472.255120801749 476.262192395625 31.09 0.54851 31.09 30.871 31.42 0 100 28 7 0 0 0 0.0022163 1 12560 93.195 56.175 1 1.2555 1.0003 0 4080000 1886100 2193900 1478 1003 556 571 2322 2322 794 AHSIQIMK 8 1 0 Oxidation (M) _AHSIQIM(ox)K_ AHSIQIM(1)K AHSIQIM(147.16)K 0 1 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 M0R117 M0R117 RPL18A 60S ribosomal protein L18a ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 472.2551 2 472.25512 942.495686 NaN NaN NaN 0.14452 6.8252E-05 NaN NaN NaN NaN 20.96 0.48466 20.96 20.742 21.226 0 0 0 0 4.1951E-14 1 5677 147.16 110.06 1 NaN NaN 0 8427500 8427500 0 1479 1003 556 571 2323 2323 794 AHSVYNFEK 9 1 0 Unmodified _AHSVYNFEK_ 0 0 0 A8K7H4;O43929;Q96B14;Q53TH5;B7Z632;CON__Q2YDI2 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.7745 2 547.766906 1093.51926 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.166 1 27.166 26.666 27.666 0 0 0 0 1.0923E-05 1 12494 109.44 75.436 1 + 1480 772 557 572 2324 2324 AHSVYNFEK 9 1 0 Unmodified _AHSVYNFEK_ 0 0 0 A8K7H4;O43929;Q96B14;Q53TH5;B7Z632;CON__Q2YDI2 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.7744 2 547.766906 1093.51926 81728.32 0.30129 0.00016504 0.027168 1.4882E-05 0.32846 0.00017992 547.76682897885 551.773901918884 31.741 0.46476 31.741 31.556 32.021 -1.9073E-06 80 24 6 0 0 0 0.006057 1 13507 65.156 65.156 1 1.3841 1.0993 0 2986600 1310200 1676400 + 1481 772 557 572 2325 2325 AHSVYNFEK 9 1 0 Unmodified _AHSVYNFEK_ 0 0 0 A8K7H4;O43929;Q96B14;Q53TH5;B7Z632;CON__Q2YDI2 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.7745 2 547.766906 1093.51926 82223.78 0.52048 0.0002851 0.17161 9.4005E-05 0.6921 0.00037911 547.7667324033 551.774150972382 31.633 0.54122 31.633 31.235 31.777 0 79 28 5 0 0 0 0.056491 1 12900 36.424 36.424 1 1.4603 1.1463 0 2258900 1027500 1231300 + 1482 772 557 572 2326 2326 AHVEGDGVVEGIIR 14 0 1 Unmodified _AHVEGDGVVEGIIR_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.2533 3 484.259807 1449.75759 89176.73 0.038026 1.8414E-05 0.34975 0.00016937 0.38777 0.00018778 484.594168353732 487.595882739248 68.795 0.67377 68.795 68.496 69.17 0 187 58 6 0 0 0 0.053989 1 39901 30.905 30.905 1 1.1956 1.2543 0 12096000 5162100 6933600 1483 684 558 573 2327 2327 AHVEGDGVVEGIIR 14 0 1 Unmodified _AHVEGDGVVEGIIR_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.5956 3 484.259807 1449.75759 89242.88 0.090449 4.3801E-05 -0.094805 -4.591E-05 -0.004356 -2.1095E-06 484.260015955013 487.5955739848 77.862 0.5301 77.862 77.566 78.096 0 118 34 5 0 0 0 0.050672 1 41712 17.402 17.402 1 1.2096 1.0334 0 2773300 1032600 1740700 1484 684 558 573 2328 2328 AHVTHPELK 9 1 0 Unmodified _AHVTHPELK_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 347.1973 3 344.525936 1030.55598 100505.9 0.43061 0.00014836 -0.73615 -0.00025362 -0.30554 -0.00010527 344.52582374639 347.19721240298 17.11 0.50079 17.11 16.985 17.486 0 63 15 6 0 0 0 0.0035715 2 4095 58.23 44.112 1 0.93998 1.0041 0 36778000 19575000 17203000 1485 1427 559 574 2329;2330 2329 AHVTHPELK 9 1 0 Unmodified _AHVTHPELK_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.2924 2 516.285266 1030.55598 82607.31 0.0029884 1.5429E-06 -0.48373 -0.00024975 -0.48075 -0.0002482 516.285145264337 520.292473269591 18.246 0.42726 18.246 18.116 18.543 0 71 20 6 0 0 0 0.0076694 1 4341 71.379 61.792 1 1.0573 0.84124 0 2964400 1346700 1617700 1486 1427 559 574 2331 2331 AIACVVTACSAELEK 15 1 0 Unmodified _AIACVVTACSAELEK_ 0 0 0 B3KXF2;J3KN16;Q5VYK3;F6XAQ5 B3KXF2 B3KXF2 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.269 3 541.268986 1620.78513 NaN NaN NaN 0.041881 2.2669E-05 NaN NaN NaN NaN 31.856 0.33616 31.856 31.663 31.999 0 0 0 0 0.01974 1 13549 24.935 12.058 1 NaN NaN 0 4618200 4618200 0 1487 952 560 575 2332 2332 AIADTGANVVVTGGK 15 1 0 Unmodified _AIADTGANVVVTGGK_ 0 0 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.8838 2 686.875173 1371.73579 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.708 1 55.708 55.208 56.208 0 0 0 0 4.776E-08 1 31333 107.17 42.454 1 1488 1592 561 576 2333 2333 AIAFLQQPR 9 0 1 Unmodified _AIAFLQQPR_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;O14660 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.3045 2 522.303458 1042.59236 84810.26 0.52018 0.00027169 -0.1268 -6.6227E-05 0.39338 0.00020547 522.303578638166 527.307324093215 75.687 1.2144 75.687 74.833 76.047 0 347 101 6 0 0 0 0.00086605 2 44509 93.262 93.262 1 2.3913 2.4293 0 29267000 9697800 19569000 1489 1507 562 577 2334;2335 2334 AIAFLQQPR 9 0 1 Unmodified _AIAFLQQPR_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;O14660 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.3037 2 522.303458 1042.59236 83969.91 0.44602 0.00023296 -0.13715 -7.1635E-05 0.30886 0.00016132 522.303601995115 527.307375150953 74.5 1.5768 74.5 73.21 74.787 0 387 134 5 0 0 0 0.00086605 1 44823 93.262 81.215 1 2.5232 2.7562 0 37793000 11241000 26552000 1490 1507 562 577 2336 2336 AIAIAAGVPVVPGTDAPITSLHEAHEFSNTYGFPIIFK 38 1 0 Unmodified _AIAIAAGVPVVPGTDAPITSLHEAHEFSNTYGFPIIFK_ 0 0 0 A0A024R5C5;P11498;E9PRE7 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 991.028 4 988.522733 3950.06183 60647.99 0.47174 0.00046633 -0.01764 -1.7437E-05 0.4541 0.00044889 988.77377887839 991.027516798389 132.59 0.42824 132.59 132.32 132.74 -1.5259E-05 110 27 11 0 0 0 0.00090093 1 86637 24.297 24.297 1 1.6623 1.634 0 23505000 7774600 15730000 1491 176 563 578 2337 2337 AIANECQANFISIK 14 1 0 Unmodified _AIANECQANFISIK_ 0 0 0 V9HW80;P55072;Q96IF9;Q0IIN5;Q9NTC4;Q9HAP0 V9HW80 V9HW80 HEL-S-70;VCP;DKFZp434K0126 Transitional endoplasmic reticulum ATPase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.9083 2 789.900865 1577.78718 NaN NaN NaN -0.47219 -0.00037298 NaN NaN NaN NaN 82.426 0.31991 82.426 82.244 82.564 0 0 0 0 0.0029309 1 49137 63.944 44.701 1 NaN NaN 0 5353000 0 5353000 1492 1613 564 579 2338 2338 AIANECQANFISIK 14 1 0 Unmodified _AIANECQANFISIK_ 0 0 0 V9HW80;P55072;Q96IF9;Q0IIN5;Q9NTC4;Q9HAP0 V9HW80 V9HW80 HEL-S-70;VCP;DKFZp434K0126 Transitional endoplasmic reticulum ATPase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.9028 2 789.900865 1577.78718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.415 1 81.415 80.915 81.915 0 0 0 0 0.0065249 1 49725 54.471 33.601 1 1493 1613 564 579 2339 2339 AIANECQANFISIK 14 1 0 Unmodified _AIANECQANFISIK_ 0 0 0 V9HW80;P55072;Q96IF9;Q0IIN5;Q9NTC4;Q9HAP0 V9HW80 V9HW80 HEL-S-70;VCP;DKFZp434K0126 Transitional endoplasmic reticulum ATPase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.4028 2 789.900865 1577.78718 69495.55 0.70616 0.0005578 0.55789 0.00044068 1.2641 0.00099848 789.902063700257 793.908228656056 94.556 0.40488 94.556 94.309 94.714 0 75 23 4 0 0 0 0.043086 1 52879 27.431 27.431 1 1.0308 0.87458 0 1483100 667040 816020 1494 1613 564 579 2340 2340 AIAVLTSGGDAQGMNAAVR 19 0 1 Oxidation (M) _AIAVLTSGGDAQGM(ox)NAAVR_ AIAVLTSGGDAQGM(1)NAAVR AIAVLTSGGDAQGM(79.09)NAAVR 0 1 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;A0A0S2Z4A8;F8VP00;F8VX13;F8VNX2;F8VZQ1;F8W1J8;F8VSF7;F8VW30;F8VSL1;F8VUB8;F8VYK8;F8VTQ3;F8VZI0;F8VVE3 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 914.467 2 909.462349 1816.91015 64715.47 0.24952 0.00022693 -0.032512 -2.9569E-05 0.21701 0.00019736 909.962796350564 914.466598041832 65.423 0.59644 65.423 65.039 65.635 0 147 53 5 0 0 0 2.8661E-06 3 37756 79.089 79.089 1 3.1524 3.3054 0 12247000 4088200 8159300 1495 61 565 580 2341;2342;2343 2343 30 AIAVLTSGGDAQGMNAAVR 19 0 1 Oxidation (M) _AIAVLTSGGDAQGM(ox)NAAVR_ AIAVLTSGGDAQGM(1)NAAVR AIAVLTSGGDAQGM(55.9)NAAVR 0 1 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;A0A0S2Z4A8;F8VP00;F8VX13;F8VNX2;F8VZQ1;F8W1J8;F8VSF7;F8VW30;F8VSL1;F8VUB8;F8VYK8;F8VTQ3;F8VZI0;F8VVE3 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.9688 2 909.462349 1816.91015 NaN NaN NaN -0.36528 -0.00033221 NaN NaN NaN NaN 64.276 0.50258 64.276 64.018 64.52 0 0 0 0 0.00011715 2 37713 55.899 33.396 1 NaN NaN 0 10380000 0 10380000 1496 61 565 580 2344;2345 2344 30 AIAVLTSGGDAQGMNAAVR 19 0 1 Oxidation (M) _AIAVLTSGGDAQGM(ox)NAAVR_ AIAVLTSGGDAQGM(1)NAAVR AIAVLTSGGDAQGM(100.38)NAAVR 0 1 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;A0A0S2Z4A8;F8VP00;F8VX13;F8VNX2;F8VZQ1;F8W1J8;F8VSF7;F8VW30;F8VSL1;F8VUB8;F8VYK8;F8VTQ3;F8VZI0;F8VVE3 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 909.4636 2 909.462349 1816.91015 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.278 1 64.278 63.778 64.778 0 0 0 0 2.3223E-10 1 37835 100.38 77.459 1 1497 61 565 580 2346 2346 30 AIAYLFPSGLFEK 13 1 0 Unmodified _AIAYLFPSGLFEK_ 0 0 0 Q86WV4;P82933 Q86WV4 Q86WV4 MRPS9 28S ribosomal protein S9, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.3987 2 728.397753 1454.78095 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.84 1 124.84 124.34 125.34 0 0 0 0 0.00066058 1 81111 81.865 43.572 1 1498 1670 566 581 2347 2347 AIAYTWFNLQAR 12 0 1 Unmodified _AIAYTWFNLQAR_ 0 0 0 A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;U3KPY9;A0A087WXP2;Q5W0Y9;A0A0S2Z4H3;A0A1B0GVN4;A0A1B0GTC1 A0A1B0GW37 A0A1B0GW37 NFIB Nuclear factor 1;Nuclear factor 1 B-type ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.8851 2 727.382968 1452.75138 NaN NaN NaN 1.17 0.00085104 NaN NaN NaN NaN 122.41 0.16682 122.41 122.33 122.5 0 0 0 0 0.034468 1 73031 55.567 35.78 1 NaN NaN 0 469500 469500 0 1499 473 567 582 2348 2348 AIAYTWFNLQAR 12 0 1 Unmodified _AIAYTWFNLQAR_ 0 0 0 A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;U3KPY9;A0A087WXP2;Q5W0Y9;A0A0S2Z4H3;A0A1B0GVN4;A0A1B0GTC1 A0A1B0GW37 A0A1B0GW37 NFIB Nuclear factor 1;Nuclear factor 1 B-type MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.3851 2 727.382968 1452.75138 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.19 1 122.19 121.69 122.69 0 0 0 0 0.028578 1 71942 56.563 36.776 1 1500 473 567 582 2349 2349 AIEAAPQEPEQK 12 1 0 Unmodified _AIEAAPQEPEQK_ 0 0 0 I3L1Y9;Q96CP2 I3L1Y9 I3L1Y9 FLYWCH2 FLYWCH family member 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.8412 2 655.832974 1309.6514 NaN NaN NaN 0.7673 0.00050322 NaN NaN NaN NaN 27.263 0.25756 27.263 27.119 27.376 0 0 0 0 0.0016061 1 12507 76.143 31.843 1 NaN NaN 0 2982800 0 2982800 1501 1320 568 583 2350 2350 AIEAAPQEPEQK 12 1 0 Unmodified _AIEAAPQEPEQK_ 0 0 0 I3L1Y9;Q96CP2 I3L1Y9 I3L1Y9 FLYWCH2 FLYWCH family member 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.8399 2 655.832974 1309.6514 NaN NaN NaN -3.1764 -0.0020832 NaN NaN NaN NaN 26.811 0.20372 26.811 26.701 26.905 0 0 0 0 3.335E-05 1 12202 98.249 41.229 1 NaN NaN 0 5847000 0 5847000 1502 1320 568 583 2351 2351 AIEALSGK 8 1 0 Unmodified _AIEALSGK_ 0 0 0 O00425;F8WD15 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 398.7365 2 394.729261 787.443968 NaN NaN NaN 0.95983 0.00037887 NaN NaN NaN NaN 28.537 0.24643 28.537 28.416 28.663 0 0 0 0 0.01581 1 13652 68.214 17.248 1 NaN NaN 0 5441300 0 5441300 1503 1364 569 584 2352 2352 AIEDGNLEEMEEEVR 15 0 1 Oxidation (M) _AIEDGNLEEM(ox)EEEVR_ AIEDGNLEEM(1)EEEVR AIEDGNLEEM(77.06)EEEVR 0 1 0 P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8;A0A0U1RRG6;A0A0U1RQU0;F6XE55;A0A0U1RQW7;A0A0U1RRN2;A0A0U1RR83;A0A0U1RQX3;A0A0U1RR26;B4DNT1;B1ALF6;A0A0U1RRJ4 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 889.8909 2 889.891088 1777.76762 NaN NaN NaN 0.34808 0.00030975 NaN NaN NaN NaN 58.726 0.30344 58.726 58.595 58.898 0 0 0 0 7.1039E-05 1 33323 77.062 71.029 1 NaN NaN 0 3453800 3453800 0 1504 1595 570 585 2353 2353 1378 AIEDGNLEEMEEEVR 15 0 1 Oxidation (M) _AIEDGNLEEM(ox)EEEVR_ AIEDGNLEEM(1)EEEVR AIEDGNLEEM(90.61)EEEVR 0 1 0 P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8;A0A0U1RRG6;A0A0U1RQU0;F6XE55;A0A0U1RQW7;A0A0U1RRN2;A0A0U1RR83;A0A0U1RQX3;A0A0U1RR26;B4DNT1;B1ALF6;A0A0U1RRJ4 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 889.891 2 889.891088 1777.76762 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.949 1 57.949 57.449 58.449 -3.8147E-06 0 0 0 4.5517E-05 1 33607 90.614 81.609 1 1505 1595 570 585 2354 2354 1378 AIEEGTLEEIEEEVR 15 0 1 Unmodified _AIEEGTLEEIEEEVR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 878.9307 2 873.425621 1744.83669 65272.45 0.60038 0.00052439 0.042308 3.6953E-05 0.64269 0.00056134 873.425985451925 878.428477617456 107.97 0.70544 107.97 107.66 108.37 0 273 52 8 0 0 0 3.4825E-10 2 67223 116.24 103.91 1 0.79059 0.87048 0 54801000 33632000 21169000 1506 695 571 586 2355;2356 2356 AIEEGTLEEIEEEVR 15 0 1 Unmodified _AIEEGTLEEIEEEVR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.927 2 873.425621 1744.83669 65460.78 0.69317 0.00060543 0.14963 0.00013069 0.8428 0.00073612 873.425876639528 878.42896113204 107.46 0.58565 107.46 107.16 107.75 0 237 40 8 0 0 0 5.2828E-07 1 68752 101.89 101.89 1 0.82821 0.96157 0 64199000 36334000 27865000 1507 695 571 586 2357 2357 AIEEGTLEEIEEEVR 15 0 1 Unmodified _AIEEGTLEEIEEEVR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 878.9317 2 873.425621 1744.83669 65823.74 0.72052 0.00062932 1.1042 0.00096445 1.8247 0.0015938 873.425858509928 878.431196988472 119.77 0.63647 119.77 119.56 120.2 0 98 30 6 0 0 0 0.0003587 2 70970 59.185 46.417 1 1.9644 1.6119 0 12214000 3683200 8530900 1508 695 571 586 2358;2359 2358 AIEEIAGVGVPELINSPK 18 1 0 Unmodified _AIEEIAGVGVPELINSPK_ 0 0 0 A0A024R2G2;Q9BXW9;H7BZJ7 A0A024R2G2 A0A024R2G2 FANCD2 Fanconi anemia group D2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 918.5123 2 918.509291 1835.00403 65739.31 0.77982 0.00071627 0.73407 0.00067425 1.5139 0.0013905 919.010882421111 922.51678276468 114.94 0.28331 114.94 114.78 115.07 0 65 17 5 0 0 0 0.0054614 1 73136 33.204 33.204 1 0.78791 0.78545 0 7906700 4117100 3789600 1509 111 572 587 2360 2360 AIEEQMVAAK 10 1 0 Oxidation (M) _AIEEQM(ox)VAAK_ AIEEQM(1)VAAK AIEEQM(94.3)VAAK 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.2875 2 553.281531 1104.54851 83580.13 0.38357 0.00021222 -0.44756 -0.00024763 -0.063995 -3.5407E-05 553.281916647006 557.287918539453 22.608 0.2572 22.608 22.46 22.718 1.9073E-06 68 16 5 0 0 0 9.3431E-05 1 8637 94.302 61.948 1 1.0616 1.0846 0 10479000 5491000 4987500 1510 2023 573 588 2361 2361 1856 AIEEQMVAAK 10 1 0 Unmodified _AIEEQMVAAK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.2911 2 545.284074 1088.5536 NaN NaN NaN 2.2907 0.0012491 NaN NaN NaN NaN 45.658 0.6445 45.658 45.269 45.914 0 0 0 0 0.00012786 1 21839 94.114 54.572 1 NaN NaN 0 5983800 0 5983800 1511 2023 573 589 2362 2362 AIEEQMVAAK 10 1 0 Unmodified _AIEEQMVAAK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.2916 2 545.284074 1088.5536 NaN NaN NaN 2.2659 0.0012356 NaN NaN NaN NaN 45.698 0.67307 45.698 45.355 46.028 0 0 0 0 0.00012786 1 21362 94.114 54.572 1 NaN NaN 0 5255800 0 5255800 1512 2023 573 589 2363 2363 AIEIVESDVK 10 1 0 Unmodified _AIEIVESDVK_ 0 0 0 B2R935;A0A024R1S2;Q99741 B2R935 B2R935 CDC6 Cell division control protein 6 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.8041 2 551.803154 1101.59175 NaN NaN NaN 0.89001 0.00049111 NaN NaN NaN NaN 60.645 0.214 60.645 60.57 60.784 3.8147E-06 0 0 0 0.0067484 1 34608 66.692 20.266 1 NaN NaN 0 4910300 4910300 0 1513 85 574 590 2364 2364 AIEIVESDVK 10 1 0 Unmodified _AIEIVESDVK_ 0 0 0 B2R935;A0A024R1S2;Q99741 B2R935 B2R935 CDC6 Cell division control protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.8027 2 551.803154 1101.59175 82437.66 0.55921 0.00030858 0.43704 0.00024116 0.99625 0.00054973 551.80330255104 555.810328572717 59.469 0.25308 59.469 59.356 59.609 -3.8147E-06 72 22 4 0 0 0 0.0035438 1 34613 64.04 42.08 1 1.3827 1.3954 0 8035500 3159500 4876000 1514 85 574 590 2365 2365 AIELLQEFSDQHPENAAEIK 20 1 0 Unmodified _AIELLQEFSDQHPENAAEIK_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;D6RDY6;O15302 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.0539 3 761.38149 2281.12264 70359.19 0.81006 0.00061677 -0.42205 -0.00032134 0.38801 0.00029542 761.715821034281 764.386870515645 101.42 0.61317 101.42 101.07 101.68 0 194 48 7 0 0 0 3.5923E-07 2 63768 76.768 76.768 1 1.0063 1.0045 0 14776000 5360900 9414600 1515 1416 575 591 2366;2367 2367 AIELLQEFSDQHPENAAEIK 20 1 0 Unmodified _AIELLQEFSDQHPENAAEIK_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;D6RDY6;O15302 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.3875 3 761.38149 2281.12264 68796.88 1.0594 0.00080661 -0.27663 -0.00021062 0.78277 0.00059599 761.715827952052 764.386379606878 114.09 0.43938 114.09 113.84 114.28 -7.6294E-06 104 18 8 0 0 0 9.701E-05 2 66522 36.744 36.744 1 1.2729 1.0186 0 8702800 3878600 4824100 1516 1416 575 591 2368;2369 2368 AIELLQEFSDQHPENAAEIK 20 1 0 Unmodified _AIELLQEFSDQHPENAAEIK_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;D6RDY6;O15302 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 764.3878 3 761.38149 2281.12264 69292.23 0.7854 0.00059799 -0.45393 -0.00034561 0.33147 0.00025237 761.715906439499 764.386721943826 113.93 0.3765 113.93 113.72 114.1 7.6294E-06 103 16 8 0 0 0 5.8106E-05 2 65472 38.453 38.453 1 1.3711 1.1181 0 7759900 3667100 4092900 1517 1416 575 591 2370;2371 2370 AIEPPPLDAVIEAEHTLR 18 0 1 Unmodified _AIEPPPLDAVIEAEHTLR_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.0245 3 657.689707 1970.04729 74206.02 0.86955 0.0005719 -0.38179 -0.0002511 0.48776 0.0003208 658.023847276893 661.02549036823 116.58 0.95859 116.58 116.21 117.17 0 501 67 12 0 0 0 5.619E-09 2 74367 98.165 98.165 1 1.2824 1.5182 0 379200000 164770000 214430000 1518 1691 576 592 2372;2373 2373 AIEPPPLDAVIEAEHTLR 18 0 1 Unmodified _AIEPPPLDAVIEAEHTLR_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.0263 3 657.689707 1970.04729 74309.22 0.82238 0.00054087 -0.12116 -7.9689E-05 0.70121 0.00046118 658.023990984251 661.025710043936 115.88 1.065 115.88 115.53 116.6 -7.6294E-06 491 68 12 0 0 0 8.3778E-06 2 75625 68.129 68.129 1 1.3049 1.522 0 496770000 214280000 282500000 1519 1691 576 592 2374;2375 2374 AIEPPPLDAVIEAEHTLR 18 0 1 Unmodified _AIEPPPLDAVIEAEHTLR_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.3604 3 657.689707 1970.04729 74554.72 1.2141 0.00079848 -0.1545 -0.00010162 1.0596 0.00069686 658.023965625466 661.025681796566 128.23 1.0377 128.23 127.83 128.87 0 287 43 12 0 0 0 2.1205E-05 2 77280 52.298 52.298 1 1.5591 1.3466 0 94677000 35781000 58897000 1520 1691 576 592 2376;2377 2376 AIEPPPLDAVIEAEHTLR 18 0 1 Unmodified _AIEPPPLDAVIEAEHTLR_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.0259 3 657.689707 1970.04729 74112.99 0.81657 0.00053705 0.056477 3.7144E-05 0.87304 0.00057419 658.024033157074 661.025764248023 127.97 0.95514 127.97 127.54 128.49 0 251 39 11 0 0 0 9.022E-06 2 76202 66.779 66.779 1 1.5366 1.342 0 182600000 73268000 109330000 1521 1691 576 592 2378;2379 2378 AIETAPLSFR 10 0 1 Unmodified _AIETAPLSFR_ 0 0 0 Q6IPU0;X6R9C8;Q7Z672 Q6IPU0 Q6IPU0 CENPP;DKFZp779J2459 Centromere protein P ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.8058 2 552.806031 1103.59751 NaN NaN NaN 0.54113 0.00029914 NaN NaN NaN NaN 80.081 0.44493 80.081 79.849 80.294 0 0 0 0 0.0035568 1 47533 76.1 48.575 1 NaN NaN 0 5926900 5926900 0 1522 1845 577 593 2380 2380 AIETAPLSFR 10 0 1 Unmodified _AIETAPLSFR_ 0 0 0 Q6IPU0;X6R9C8;Q7Z672 Q6IPU0 Q6IPU0 CENPP;DKFZp779J2459 Centromere protein P MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.8057 2 552.806031 1103.59751 82430.9 0.69984 0.00038687 0.15827 8.7493E-05 0.85811 0.00047437 552.806310089181 557.810277577006 78.957 0.5006 78.957 78.745 79.246 0 131 42 4 0 0 0 0.012458 1 47907 50.607 45.619 1 0.77144 0.77371 0 17688000 9128500 8559400 1523 1845 577 593 2381 2381 AIFAGYK 7 1 0 Unmodified _AIFAGYK_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 389.2225 2 385.215789 768.417025 96976.56 0.19932 7.678E-05 0.19209 7.3995E-05 0.3914 0.00015077 385.215841323877 389.222802445448 47.834 1.0148 47.834 47.726 48.741 0 412 83 8 0 0 0 0.040059 2 26312 59.641 5.104 1 0.86992 1.0308 0 464350000 240570000 223780000 1524 1497 578 594 2382;2383 2382 AIFAGYK 7 1 0 Unmodified _AIFAGYK_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 385.2156 2 385.215789 768.417025 96502.16 0.40089 0.00015443 0.039874 1.536E-05 0.44076 0.00016979 385.215752718524 389.222778318257 46.752 1.3204 46.752 46.23 47.55 0 466 104 8 0 0 0 0.03153 1 25728 66.994 5.988 1 0.91606 1.0788 0 494950000 255740000 239220000 1525 1497 578 594 2384 2384 AIFAVLTSVLTK 12 1 0 Unmodified _AIFAVLTSVLTK_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.8898 2 631.889564 1261.76457 77840.98 0.57124 0.00036096 0.26652 0.00016841 0.83776 0.00052937 631.889622313785 635.896811091881 128.56 0.49799 128.56 128.3 128.79 0 150 32 6 0 0 0 0.00019323 2 83888 82.261 82.261 1 0.9199 0.91017 0 8329400 4282200 4047200 1526 2150 579 595 2385;2386 2386 AIFAVLTSVLTK 12 1 0 Unmodified _AIFAVLTSVLTK_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.897 2 631.889564 1261.76457 77463.13 0.96534 0.00060999 -0.059897 -3.7849E-05 0.90544 0.00057214 631.889416227797 635.89657566909 128.09 0.47795 128.09 127.89 128.37 0 133 28 6 0 0 0 7.557E-09 1 85537 123.63 123.63 1 1.1017 1.1233 0 12152000 5983600 6168600 1527 2150 579 595 2387 2387 AIFDQLMTFGIEPFK 15 1 0 Oxidation (M) _AIFDQLM(ox)TFGIEPFK_ AIFDQLM(1)TFGIEPFK AIFDQLM(60.26)TFGIEPFK 0 1 0 H0Y9Z8;Q9BPX3 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.8853 2 886.950024 1771.88549 64186.19 0.86564 0.00076778 0.018688 1.6576E-05 0.88433 0.00078436 886.950121472778 890.957325727377 130.41 0.91713 130.41 129.9 130.82 0 257 56 6 0 0 0 0.00014953 1 84777 60.255 60.255 1 1.1445 1.2868 0 70769000 41970000 28799000 1528 1995;1289 580 596 2388 2388 984 AIFDQLMTFGIEPFK 15 1 0 Oxidation (M) _AIFDQLM(ox)TFGIEPFK_ AIFDQLM(1)TFGIEPFK AIFDQLM(72.65)TFGIEPFK 0 1 0 H0Y9Z8;Q9BPX3 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.9525 2 886.950024 1771.88549 NaN NaN NaN 1.5663 0.0013892 NaN NaN NaN NaN 129.98 0.12918 129.98 129.9 130.03 0 0 0 0 0.00013897 1 84724 72.652 55.627 1 NaN NaN 0 1686900 1686900 0 1529 1995;1289 580 596 2389 2389 984 AIFDQLMTFGIEPFK 15 1 0 Oxidation (M) _AIFDQLM(ox)TFGIEPFK_ AIFDQLM(1)TFGIEPFK AIFDQLM(46.71)TFGIEPFK 0 1 0 H0Y9Z8;Q9BPX3 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.9493 2 886.950024 1771.88549 64537.82 0.58248 0.00051663 0.23844 0.00021148 0.82091 0.00072811 886.950322018161 890.957507658428 129.99 1.0139 129.99 129.55 130.56 0 296 68 6 0 0 0 0.00087604 1 86621 46.706 46.706 1 1.1394 1.282 0 71255000 40603000 30651000 1530 1995;1289 580 596 2390 2390 984 AIFEIVLNR 9 0 1 Unmodified _AIFEIVLNR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.8224 2 537.818941 1073.62333 NaN NaN NaN -0.63036 -0.00033902 NaN NaN NaN NaN 107.68 0.61034 107.68 107.39 108 0 0 0 0 0.042582 1 66929 49.418 23.681 1 NaN NaN 0 5844200 0 5844200 1531 1411 581 597 2391 2391 AIFEIVLNR 9 0 1 Unmodified _AIFEIVLNR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.8229 2 537.818941 1073.62333 NaN NaN NaN -0.31355 -0.00016863 NaN NaN NaN NaN 107.01 0.57841 107.01 106.71 107.29 0 0 0 0 0.0019632 1 68085 83.265 51.33 1 NaN NaN 0 6567900 0 6567900 1532 1411 581 597 2392 2392 AIFEIVLNR 9 0 1 Unmodified _AIFEIVLNR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.8197 2 537.818941 1073.62333 85417.55 0.79203 0.00042597 0.19963 0.00010737 0.99166 0.00053333 537.819024716768 542.823109289478 118.93 0.33533 118.93 118.73 119.07 0 51 16 4 0 0 0 0.023689 2 70278 48.561 31.785 1 0.95541 0.84504 0 1190700 626440 564310 1533 1411 581 597 2393;2394 2393 AIFEIVLNR 9 0 1 Unmodified _AIFEIVLNR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.8188 2 537.818941 1073.62333 87184.91 0.80635 0.00043367 -0.50913 -0.00027382 0.29722 0.00015985 537.818567247383 542.822789292875 118.65 0.32758 118.65 118.48 118.81 0 50 17 5 0 0 0 0.027606 2 69211 46.994 30.218 1 0.74652 0.64104 0 1088700 690950 397710 1534 1411 581 597 2395;2396 2395 AIFENTLSTYPK 12 1 0 Unmodified _AIFENTLSTYPK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.3685 2 692.361367 1382.70818 71965.2 0.64597 0.00044725 0.41149 0.0002849 1.0575 0.00073215 692.361592374047 696.368490085541 83.167 0.87631 83.167 82.717 83.593 7.6294E-06 287 73 6 0 0 0 1.1201E-17 3 49731 138.66 138.66 1 1.0795 1.1962 0 58554000 25459000 33096000 1535 1741 582 598 2397;2398;2399 2397 AIFENTLSTYPK 12 1 0 Unmodified _AIFENTLSTYPK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.3688 2 692.361367 1382.70818 71210.42 0.6011 0.00041618 0.11286 7.814E-05 0.71396 0.00049432 692.361594638328 696.368215633116 82.103 0.80783 82.103 81.695 82.503 0 295 72 6 0 0 0 1.6063E-22 2 50340 152.28 152.28 1 1.009 1.1273 0 89368000 45504000 43864000 1536 1741 582 598 2400;2401 2401 AIFLADGNVFTTGFSR 16 0 1 Unmodified _AIFLADGNVFTTGFSR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 863.4464 2 858.441212 1714.86787 65993.18 0.56699 0.00048673 -0.20483 -0.00017583 0.36216 0.00031089 858.440810921797 863.445385393898 131.4 0.541 131.4 131.13 131.68 0 144 25 9 0 0 0 1.9987E-08 3 79663 101.32 77.029 1 6.2845 5.2422 0 23044000 2888300 20156000 1537 340 583 599 2402;2403;2404 2402 AIFLADGNVFTTGFSR 16 0 1 Unmodified _AIFLADGNVFTTGFSR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 863.4462 2 858.441212 1714.86787 65790.7 0.78967 0.00067789 -0.30372 -0.00026072 0.48595 0.00041716 858.942838829259 863.445288763123 131.17 0.61104 131.17 130.92 131.53 0 154 27 9 0 0 0 3.106E-09 3 78630 110.92 88.044 1 6.7517 5.8895 0 29881000 3795400 26085000 1538 340 583 599 2405;2406;2407 2405 AIFQTIQNR 9 0 1 Unmodified _AIFQTIQNR_ 0 0 0 O95373;B3KQG6;B3KNG9 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.8081 2 545.803823 1089.59309 80399.57 0.69324 0.00037837 -1.6033 -0.00087508 -0.91004 -0.00049671 545.801863481933 550.807138779096 57.113 0.76926 57.113 56.827 57.596 0 162 61 4 0 0 0 0.0019479 1 32246 78.77 35.001 1 1.9054 1.9825 0 13477000 6435800 7040800 1539 1424 584 600 2408 2408 AIFQTIQNR 9 0 1 Unmodified _AIFQTIQNR_ 0 0 0 O95373;B3KQG6;B3KNG9 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.8086 2 545.803823 1089.59309 81691.08 0.3663 0.00019993 -1.804 -0.00098465 -1.4377 -0.00078472 545.801674090659 550.807130332784 56.054 0.80619 56.054 55.744 56.551 0 187 62 5 0 0 0 0.00014497 1 32127 108.46 44.896 1 1.9076 2.0295 0 24285000 8636600 15648000 1540 1424 584 600 2409 2409 AIFTGYYGK 9 1 0 Unmodified _AIFTGYYGK_ 0 0 0 B4DFN6;B4DI06;A0A024R1T5;P09543 B4DFN6 B4DFN6 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.2709 2 510.263468 1018.51238 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.136 1 63.136 62.636 63.636 -3.8147E-06 0 0 0 0.026458 1 37069 54.157 19.333 1 1541 88 585 601 2410 2410 AIFTTGQGASAVGLTAYVQR 20 0 1 Unmodified _AIFTTGQGASAVGLTAYVQR_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1011.0381 2 1006.034 2010.05344 NaN NaN NaN -0.18583 -0.00018695 NaN NaN NaN NaN 106.53 0.37508 106.53 106.35 106.73 0 0 0 0 2.5826E-19 1 66141 117.92 103.66 1 NaN NaN 0 8360500 0 8360500 1542 955 586 602 2411 2411 AIFTTGQGASAVGLTAYVQR 20 0 1 Unmodified _AIFTTGQGASAVGLTAYVQR_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1011.4691 2 1006.034 2010.05344 61250.35 0.57613 0.00057961 -0.21597 -0.00021728 0.36016 0.00036233 1006.5341008891 1011.03781720923 105.93 0.37657 105.93 105.76 106.13 0 92 28 5 0 0 0 2.1946E-06 2 67476 68.83 68.83 1 1.8856 1.861 0 14881000 4614600 10267000 1543 955 586 602 2412;2413 2413 AIFTTGQGASAVGLTAYVQR 20 0 1 Unmodified _AIFTTGQGASAVGLTAYVQR_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1011.5427 2 1006.034 2010.05344 NaN NaN NaN 1.2749 0.0012826 NaN NaN NaN NaN 117.85 0.30054 117.85 117.75 118.05 0 0 0 0 0.0061029 1 69499 40.477 30.689 1 NaN NaN 0 1765900 0 1765900 1544 955 586 602 2414 2414 AIFTTGQGASAVGLTAYVQR 20 0 1 Unmodified _AIFTTGQGASAVGLTAYVQR_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1011.5416 2 1006.034 2010.05344 61532.35 0.15473 0.00015567 0.49544 0.00049843 0.65017 0.0006541 1006.03443896047 1011.54108842445 117.69 0.3474 117.69 117.52 117.86 -7.6294E-06 68 17 6 0 0 0 0.00014113 1 68468 41.378 41.378 1 0.97874 0.86165 0 3632700 1809600 1823000 1545 955 586 602 2415 2415 AIGIGAYLVR 10 0 1 Unmodified _AIGIGAYLVR_ 0 0 0 A0A024R0Y2;B2ZZ90;Q13085;Q7Z5W8;Q59FY4;A2NX49;O00763;B4DYJ7;Q4G170;F8W8T8;H0YGH5;Q59GJ9 A0A024R0Y2 A0A024R0Y2 hCG_30204;ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.8134 2 516.813659 1031.61277 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.144 1 96.144 95.644 96.644 0 0 0 0 0.035552 1 58551 48.561 11.003 1 1546 60 587 603 2416 2416 AIGIGAYLVR 10 0 1 Unmodified _AIGIGAYLVR_ 0 0 0 A0A024R0Y2;B2ZZ90;Q13085;Q7Z5W8;Q59FY4;A2NX49;O00763;B4DYJ7;Q4G170;F8W8T8;H0YGH5;Q59GJ9 A0A024R0Y2 A0A024R0Y2 hCG_30204;ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.8135 2 516.813659 1031.61277 88289.3 0.71026 0.00036707 0.11501 5.9439E-05 0.82527 0.00042651 516.813578118987 521.817733969829 95.211 0.33429 95.211 95.076 95.411 -7.6294E-06 83 29 5 0 0 0 0.015683 1 59256 48.561 32.088 1 1.1522 1.1632 0 10233000 3849800 6382800 1547 60 587 603 2417 2417 AIGNTELENK 10 1 0 Unmodified _AIGNTELENK_ 0 0 0 P42285;A8K6I4;B4E3M6;H0YAC4 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.7837 2 544.782753 1087.55095 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.956 1 26.956 26.456 27.456 -1.9073E-06 0 0 0 0.00029646 1 12315 76.827 40.641 1 1548 1563 588 604 2418 2418 AIGNTELENK 10 1 0 Unmodified _AIGNTELENK_ 0 0 0 P42285;A8K6I4;B4E3M6;H0YAC4 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.7899 2 544.782753 1087.55095 81482.25 0.46765 0.00025477 -0.61615 -0.00033567 -0.1485 -8.0899E-05 545.284010758872 548.789645605827 30.676 0.4678 30.676 30.474 30.942 1.9073E-06 170 30 8 0 0 0 0.0067028 1 12767 58.433 32.874 1 0.31581 0.25218 0 9209700 6166100 3043600 1549 1563 588 604 2419 2419 AIGPHDVLATLLNNLK 16 1 0 Unmodified _AIGPHDVLATLLNNLK_ 0 0 0 O75533;H7C341 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.3326 3 563.661311 1687.9621 82809.87 0.7514 0.00042354 -0.4115 -0.00023195 0.3399 0.00019159 563.661020955853 566.332494788572 129.81 1.0461 129.81 129.53 130.58 0 243 70 5 0 0 0 6.271E-05 2 86922 59.709 59.709 1 1.171 1.1595 0 5876900 2152000 3724900 1550 1408 589 605 2420;2421 2420 AIGPHDVLATLLNNLK 16 1 0 Unmodified _AIGPHDVLATLLNNLK_ 0 0 0 O75533;H7C341 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.3339 3 563.661311 1687.9621 NaN NaN NaN 0.12791 7.2099E-05 NaN NaN NaN NaN 129.27 0.37152 129.27 129.15 129.52 0 0 0 0 0.00094989 2 86288 57.414 52.945 1 NaN NaN 0 3044700 0 3044700 1551 1408 589 605 2422;2423 2423 AIGPHDVLATLLNNLK 16 1 0 Unmodified _AIGPHDVLATLLNNLK_ 0 0 0 O75533;H7C341 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.9967 3 563.661311 1687.9621 NaN NaN NaN -0.39282 -0.00022142 NaN NaN NaN NaN 129.58 0.46376 129.58 129.21 129.67 0 0 0 0 5.1767E-05 1 86516 73.022 61.761 1 NaN NaN 0 3089100 3089100 0 1552 1408 589 605 2424 2424 AIGSASEGAQSSLQEVYHK 19 1 0 Unmodified _AIGSASEGAQSSLQEVYHK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.9913 3 654.656954 1960.94903 74694.11 0.69502 0.000455 0.19262 0.0001261 0.88764 0.0005811 654.991317855748 657.32854586157 55.187 0.65727 55.187 54.908 55.565 0 338 63 8 0 0 0 1.1588E-31 2 30999 149.73 149.73 1 1.7362 1.8857 0 46558000 13178000 33379000 1553 595 590 606 2425;2426 2426 AIGSASEGAQSSLQEVYHK 19 1 0 Unmodified _AIGSASEGAQSSLQEVYHK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.4886 2 981.481793 1960.94903 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.107 1 55.107 54.607 55.607 0 0 0 0 0.0033002 1 30986 51.875 35.985 1 1554 595 590 606 2427 2427 AIGSASEGAQSSLQEVYHK 19 1 0 Unmodified _AIGSASEGAQSSLQEVYHK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.6569 3 654.656954 1960.94903 73871.03 0.55804 0.00036533 -0.51481 -0.00033703 0.043229 2.83E-05 654.656409199597 657.328096307249 54.158 0.53289 54.158 53.87 54.403 0 283 48 7 0 0 0 2.496E-51 3 30895 164.53 164.53 1 1.8704 2.1002 0 75310000 26852000 48459000 1555 595 590 606 2428;2429;2430 2429 AIGSASEGAQSSLQEVYHK 19 1 0 Unmodified _AIGSASEGAQSSLQEVYHK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 985.9897 2 981.481793 1960.94903 NaN NaN NaN -0.060518 -5.9398E-05 NaN NaN NaN NaN 54.161 0.17995 54.161 54.042 54.222 0 0 0 0 4.7573E-13 1 30909 99.991 85.733 1 NaN NaN 0 7353600 0 7353600 1556 595 590 606 2431 2431 AIGSASEGAQSSLQEVYHK 19 1 0 Unmodified _AIGSASEGAQSSLQEVYHK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.4811 2 981.481793 1960.94903 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.141 1 54.141 53.641 54.641 3.8147E-06 0 0 0 0.0038621 1 30934 50.843 34.706 1 1557 595 590 606 2432 2432 AIGSASEGAQSSLQEVYHK 19 1 0 Unmodified _AIGSASEGAQSSLQEVYHK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.6636 3 654.656954 1960.94903 74517.8 0.82463 0.00053985 -0.04812 -3.1502E-05 0.77651 0.00050835 654.656902860298 657.328163347551 65.221 0.53532 65.221 64.953 65.488 0 237 41 9 0 0 0 1.1948E-05 2 33600 51.348 51.348 1 1.5273 1.2154 0 9908500 4403900 5504600 1558 595 590 606 2433;2434 2433 AIGSASEGAQSSLQEVYHK 19 1 0 Unmodified _AIGSASEGAQSSLQEVYHK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.6576 3 654.656954 1960.94903 75562.8 0.45746 0.00029948 -0.060054 -3.9315E-05 0.3974 0.00026016 654.991390512316 657.327604090252 65.753 0.5403 65.753 65.535 66.076 0 227 42 8 0 0 0 1.1152E-05 3 33223 52.784 52.784 1 1.4505 1.1817 0 7498000 3064700 4433400 1559 595 590 606 2435;2436;2437 2437 AIGTDEDLAHSSIR 14 0 1 Unmodified _AIGTDEDLAHSSIR_ 0 0 0 H7C0I5;H0YGN5;B4DNL7;Q5QP19;Q53FP3;B2R5S3;Q9Y697 H7C0I5 H7C0I5 NFS1 Cysteine desulfurase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.8763 2 742.870619 1483.72669 NaN NaN NaN 1.2328 0.00091585 NaN NaN NaN NaN 44.258 0.1181 44.258 44.219 44.337 0 0 0 0 0.0078008 1 24161 53.569 34.897 1 NaN NaN 0 3078300 0 3078300 1560 834 591 607 2438 2438 AIGVLTSGGDAQGMNAAVR 19 0 1 Oxidation (M) _AIGVLTSGGDAQGM(ox)NAAVR_ AIGVLTSGGDAQGM(1)NAAVR AIGVLTSGGDAQGM(52.58)NAAVR 0 1 0 P17858;Q01813 P17858;Q01813 Q01813 PFKL;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.4589 2 902.454524 1802.8945 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.478 1 61.478 60.978 61.978 0 0 0 0 0.0013383 1 35183 52.576 37.036 1 1561 1677;1495 592 608 2439 2439 1249 AIGVLTSGGDAQGMNAAVR 19 0 1 Oxidation (M) _AIGVLTSGGDAQGM(ox)NAAVR_ AIGVLTSGGDAQGM(1)NAAVR AIGVLTSGGDAQGM(136.7)NAAVR 0 1 0 P17858;Q01813 P17858;Q01813 Q01813 PFKL;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 907.4585 2 902.454524 1802.8945 65236.94 0.49153 0.00044358 0.14556 0.00013136 0.63709 0.00057495 902.453768147167 907.458948158455 60.459 0.59978 60.459 60.295 60.894 0 150 43 7 0 0 0 1.173E-23 2 35299 136.7 136.7 1 2.6577 2.9032 0 37747000 10486000 27261000 1562 1677;1495 592 608 2440;2441 2440 1249 AIHTAPVATMAFDPTSTLLATGGCDGAVR 29 0 1 Oxidation (M) _AIHTAPVATM(ox)AFDPTSTLLATGGCDGAVR_ AIHTAPVATM(1)AFDPTSTLLATGGCDGAVR AIHTAPVATM(46.3)AFDPTSTLLATGGCDGAVR 0 1 0 Q12788;J3KNP2 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 973.4792 3 973.144269 2916.41098 61835.71 0.31224 0.00030386 0.3347 0.00032571 0.64694 0.00062956 973.479168872138 976.814870004186 106.32 0.65279 106.32 106.01 106.66 0 295 46 11 0 0 0 1.9968E-07 1 65943 46.296 46.296 1 0.83319 0.85181 0 26470000 14927000 11543000 1563 1698 593 609 2442 2442 1531 AIHTAPVATMAFDPTSTLLATGGCDGAVR 29 0 1 Oxidation (M) _AIHTAPVATM(ox)AFDPTSTLLATGGCDGAVR_ AIHTAPVATM(1)AFDPTSTLLATGGCDGAVR AIHTAPVATM(62.68)AFDPTSTLLATGGCDGAVR 0 1 0 Q12788;J3KNP2 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 976.8153 3 973.144269 2916.41098 62140.04 0.31984 0.00031125 0.33319 0.00032425 0.65304 0.0006355 973.479468802231 976.815143816342 105.48 0.74167 105.48 105.1 105.84 0 280 52 9 0 0 0 3.6699E-16 2 66994 62.683 57.064 1 0.75917 0.83002 0 35535000 20823000 14712000 1564 1698 593 609 2443;2444 2443 1531 AIHTAPVATMAFDPTSTLLATGGCDGAVR 29 0 1 Unmodified _AIHTAPVATMAFDPTSTLLATGGCDGAVR_ 0 0 0 Q12788;J3KNP2 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 971.4828 3 967.812631 2900.41606 60423.95 0.10222 9.8931E-05 0.50168 0.00048553 0.6039 0.00058446 968.481930344206 971.48362633457 125.05 0.28748 125.05 124.88 125.17 -7.6294E-06 63 13 6 0 0 0 0.00052013 1 74959 25.275 18.912 1 1.1104 0.93435 0 4510100 1701600 2808500 1565 1698 593 610 2445 2445 AIHTAPVATMAFDPTSTLLATGGCDGAVR 29 0 1 Unmodified _AIHTAPVATMAFDPTSTLLATGGCDGAVR_ 0 0 0 Q12788;J3KNP2 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 971.4839 3 967.812631 2900.41606 61166.82 0.23081 0.00022338 0.68285 0.00066087 0.91366 0.00088425 968.48281092718 971.48379153135 124.93 0.32396 124.93 124.73 125.06 0 75 15 7 0 0 0 0.0002937 1 74017 30.352 23.988 1 1.652 1.4223 0 4414000 1487900 2926100 1566 1698 593 610 2446 2446 AIHVLDVEQGQLER 14 0 1 Unmodified _AIHVLDVEQGQLER_ 0 0 0 Q9H6Y2 Q9H6Y2 Q9H6Y2 WDR55 WD repeat-containing protein 55 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.2901 3 536.289766 1605.84747 83293.16 0.56043 0.00030055 0.47331 0.00025383 1.0337 0.00055438 536.290491093641 539.625878270414 72.075 0.61551 72.075 71.786 72.402 0 196 48 6 0 0 0 0.00010937 2 42112 61.423 61.423 1 1.0246 1.0628 0 22693000 10074000 12619000 1567 2039 594 611 2447;2448 2447 AIHVLDVEQGQLER 14 0 1 Unmodified _AIHVLDVEQGQLER_ 0 0 0 Q9H6Y2 Q9H6Y2 Q9H6Y2 WDR55 WD repeat-containing protein 55 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.6258 3 536.289766 1605.84747 81507.24 0.50724 0.00027203 0.058399 3.1319E-05 0.56564 0.00030335 536.624174967057 539.625713662508 81.87 0.51686 81.87 81.655 82.172 0 139 30 6 0 0 0 0.041928 2 44406 19.173 19.173 1 0.78589 0.67054 0 5643500 2942500 2701000 1568 2039 594 611 2449;2450 2450 AIHVLDVEQGQLER 14 0 1 Unmodified _AIHVLDVEQGQLER_ 0 0 0 Q9H6Y2 Q9H6Y2 Q9H6Y2 WDR55 WD repeat-containing protein 55 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.6246 3 536.289766 1605.84747 82354.46 0.4745 0.00025447 -0.081567 -4.3744E-05 0.39293 0.00021072 536.289925473223 539.625706893757 81.978 0.53629 81.978 81.691 82.227 0 148 31 7 0 0 0 0.0022732 2 43610 40.477 40.477 1 0.90258 0.74882 0 5128900 2853900 2275000 1569 2039 594 611 2451;2452 2452 AIIDEFEQK 9 1 0 Unmodified _AIIDEFEQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.7823 2 546.782222 1091.54989 82072.09 0.58457 0.00031963 0.10703 5.852E-05 0.6916 0.00037815 546.7822310228 550.78937387184 71.147 0.97124 71.147 70.702 71.674 0 425 80 9 0 0 0 1.5452E-05 2 41469 122.13 113.7 1 0.91649 1.0719 0 283910000 146730000 137180000 1570 908 595 612 2453;2454 2454 AIIDEFEQK 9 1 0 Unmodified _AIIDEFEQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.7899 2 546.782222 1091.54989 82416.29 0.51784 0.00028314 0.12129 6.6321E-05 0.63913 0.00034947 546.782246488117 550.789345627738 69.944 0.79482 69.944 69.716 70.51 0 362 65 8 0 0 0 1.8757E-05 2 41622 119.29 119.29 1 0.91791 1.0803 0 402140000 198850000 203300000 1571 908 595 612 2455;2456 2456 AIIDEFEQK 9 1 0 Unmodified _AIIDEFEQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.7826 2 546.782222 1091.54989 81643.63 0.42514 0.00023246 0.060858 3.3276E-05 0.48599 0.00026573 546.782175301382 550.78936632747 80.952 0.97023 80.952 80.606 81.576 0 320 60 9 0 0 0 0.0019479 2 43770 78.77 63.389 1 1.6047 1.3384 0 48693000 18935000 29758000 1572 908 595 612 2457;2458 2458 AIIDEFEQK 9 1 0 Unmodified _AIIDEFEQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.7826 2 546.782222 1091.54989 81668.16 0.62099 0.00033954 -0.096064 -5.2526E-05 0.52492 0.00028702 546.782164088763 550.789235748595 81.212 0.91219 81.212 80.881 81.793 0 316 51 9 0 0 0 0.017976 1 43078 52.482 46.701 1 1.6423 1.3737 0 44719000 17702000 27017000 1573 908 595 612 2459 2459 AIIEADPLTTTR 12 0 1 Unmodified _AIIEADPLTTTR_ 0 0 0 B9ZVV8;B4DND2;Q96H41;Q53H47 B9ZVV8 B9ZVV8 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.8585 2 650.858992 1299.70343 NaN NaN NaN -0.59348 -0.00038627 NaN NaN NaN NaN 79.714 0.32229 79.714 79.503 79.826 0 0 0 0 0.015754 1 48504 52.79 15.314 1 NaN NaN 0 4972900 4972900 0 1574 1011 596 613 2460 2460 AIIEADPLTTTR 12 0 1 Unmodified _AIIEADPLTTTR_ 0 0 0 B9ZVV8;B4DND2;Q96H41;Q53H47 B9ZVV8 B9ZVV8 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.8588 2 650.858992 1299.70343 77354.09 0.49156 0.00031994 -0.9189 -0.00059807 -0.42734 -0.00027814 650.859248400953 655.863412408703 91.893 0.69475 91.893 91.497 92.192 0 116 42 6 0 0 0 0.014555 2 50277 43.512 43.512 1 2.1144 1.8414 0 1510300 630200 880070 1575 1011 596 613 2461;2462 2461 AIIIFVPVPQLK 12 1 0 Unmodified _AIIIFVPVPQLK_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.4388 2 669.431399 1336.84824 73628.65 1.2349 0.00082671 -0.26036 -0.0001743 0.97459 0.00065242 669.431476772979 673.438157026458 129.72 0.87611 129.72 129.53 130.4 0 249 51 12 0 0 0 6.2544E-09 3 84445 123.92 123.92 1 0.94947 1.1286 0 569670000 294970000 274700000 1576 1631 597 614 2463;2464;2465 2463 AIIIFVPVPQLK 12 1 0 Unmodified _AIIIFVPVPQLK_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.4387 2 669.431399 1336.84824 76759.38 0.99016 0.00066285 0.044972 3.0105E-05 1.0351 0.00069295 669.933059669596 673.438244320451 130.28 0.33554 130.28 130.05 130.39 0 51 21 4 0 0 0 0.0005435 1 84991 69.423 69.423 1 0.86361 0.88428 0 4316100 1946200 2369800 1577 1631 597 614 2466 2466 AIIIFVPVPQLK 12 1 0 Unmodified _AIIIFVPVPQLK_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.3976 2 669.431399 1336.84824 79323.71 0.87758 0.00058748 -0.3297 -0.00022071 0.54788 0.00036677 669.431240814462 673.438186899931 130.51 0.44611 130.51 130.4 130.85 0 53 27 4 0 0 0 0.054295 1 85227 51.346 51.346 1 0.86944 0.97772 0 2198300 1157700 1040600 1578 1631 597 614 2467 2467 AIIIFVPVPQLK 12 1 0 Unmodified _AIIIFVPVPQLK_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.4319 2 669.431399 1336.84824 74360.08 0.69894 0.00046789 0.12524 8.3839E-05 0.82418 0.00055173 669.431688351234 673.438373034781 129.24 0.66183 129.24 129.06 129.72 0 242 39 11 0 0 0 6.2544E-09 2 86224 123.92 123.92 1 0.95486 1.1261 0 743270000 372270000 371000000 1579 1631 597 614 2468;2469 2468 AIIIFVPVPQLK 12 1 0 Unmodified _AIIIFVPVPQLK_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.4308 2 669.431399 1336.84824 74584.75 0.74553 0.00049908 0.15386 0.000103 0.8994 0.00060209 669.431336656004 673.438527928343 134.89 0.2468 134.89 134.75 135 0 24 4 8 0 0 0 8.4298E-05 3 82583 96.711 96.711 1 0.85504 0.7442 0 149660000 78213000 71451000 1580 1631 597 614 2470;2471;2472 2471 AIIIFVPVPQLK 12 1 0 Unmodified _AIIIFVPVPQLK_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.439 2 669.431399 1336.84824 73703 0.9236 0.00061829 0.23753 0.00015901 1.1611 0.0007773 669.431527994816 673.438469047832 134.84 0.18834 134.84 134.71 134.9 0 22 3 9 0 0 0 0.00020568 2 81667 81.548 81.548 1 0.90435 0.77847 0 171660000 86356000 85306000 1581 1631 597 614 2473;2474 2474 AIILAAAPGEK 11 1 0 Unmodified _AIILAAAPGEK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.3258 2 527.318774 1052.623 NaN NaN NaN -0.36592 -0.00019296 NaN NaN NaN NaN 64.843 0.61682 64.843 64.479 65.096 0 0 0 0 0.053334 1 38063 43.282 8.4742 1 NaN NaN 0 8414400 0 8414400 1582 222 598 615 2475 2475 AIILAAAPGEK 11 1 0 Unmodified _AIILAAAPGEK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.3192 2 527.318774 1052.623 84159.27 0.37319 0.00019679 0.52294 0.00027576 0.89613 0.00047254 527.319327655442 531.325891427566 75.386 0.79033 75.386 75.003 75.794 0 208 57 5 0 0 0 0.0064337 2 40094 54.416 53.327 1 0.90185 0.72763 0 2790700 1495100 1295600 1583 222 598 615 2476;2477 2477 AIILAAAPGEK 11 1 0 Unmodified _AIILAAAPGEK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.326 2 527.318774 1052.623 84728.16 0.27015 0.00014245 0.39876 0.00021027 0.66891 0.00035273 527.319259033103 531.325948169624 75.637 0.83852 75.637 75.218 76.057 0 208 61 6 0 0 0 0.0064337 2 39303 54.416 54.416 1 0.92877 0.72195 0 2146900 1064500 1082400 1584 222 598 615 2478;2479 2478 AILAGAQPIEEMR 13 0 1 Oxidation (M) _AILAGAQPIEEM(ox)R_ AILAGAQPIEEM(1)R AILAGAQPIEEM(90.05)R 0 1 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.8767 2 707.871576 1413.7286 73117.66 0.50338 0.00035633 -0.016991 -1.2027E-05 0.48639 0.0003443 707.871363340095 712.875950274078 64.504 0.83014 64.504 64.256 65.086 0 270 73 6 0 0 0 6.3187E-05 2 37042 90.05 68.587 1 1.2277 1.256 0 33144000 16490000 16655000 1585 895 599 616 2480;2481 2480 702 AILAGAQPIEEMR 13 0 1 Oxidation (M) _AILAGAQPIEEM(ox)R_ AILAGAQPIEEM(1)R AILAGAQPIEEM(73.84)R 0 1 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.8723 2 707.871576 1413.7286 72278.71 0.72425 0.00051268 -0.50552 -0.00035784 0.21874 0.00015484 707.871506363391 712.875840795565 63.406 0.63605 63.406 63.148 63.784 -3.8147E-06 245 53 7 0 0 0 6.3587E-05 2 37264 80.037 80.037 1 1.3489 1.4579 0 26818000 12449000 14369000 1586 895 599 616 2482;2483 2483 702 AILAGAQPIEEMR 13 0 1 Oxidation (M) _AILAGAQPIEEM(ox)R_ AILAGAQPIEEM(1)R AILAGAQPIEEM(42.8)R 0 1 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.3777 2 707.871576 1413.7286 72252.91 0.77979 0.00055199 -0.55117 -0.00039016 0.22862 0.00016183 707.870621608501 712.875928991202 74.08 0.63953 74.08 73.786 74.425 0 191 42 7 0 0 0 0.0045751 1 39176 42.802 28.596 1 0.89046 0.74813 0 4326200 2358200 1968000 1587 895 599 616 2484 2484 702 AILAGAQPIEEMR 13 0 1 Oxidation (M) _AILAGAQPIEEM(ox)R_ AILAGAQPIEEM(1)R AILAGAQPIEEM(43.65)R 0 1 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 707.8721 2 707.871576 1413.7286 NaN NaN NaN -1.4002 -0.00099118 NaN NaN NaN NaN 74.55 0.76107 74.55 74.213 74.974 0 0 0 0 0.0087954 1 38659 43.651 23.347 1 NaN NaN 0 2167500 2167500 0 1588 895 599 616 2485 2485 702 AILCLLLGGVER 12 0 1 Unmodified _AILCLLLGGVER_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.389 2 657.384122 1312.75369 76317.07 1.0319 0.00067837 -0.19106 -0.0001256 0.84087 0.00055277 657.383842349858 662.388148701921 123.27 0.45673 123.27 123.06 123.52 -7.6294E-06 115 35 4 0 0 0 0.00022453 2 79972 88.495 50.192 1 1.0505 1.0842 0 6199900 3317800 2882000 1589 568 600 617 2486;2487 2486 AILDASR 7 0 1 Unmodified _AILDASR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2;H0YDU4 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.2135 2 373.213778 744.413003 101537 0.1527 5.699E-05 -0.12784 -4.7712E-05 0.024858 9.2774E-06 373.213695286035 378.217732238482 28.313 0.7229 28.313 27.818 28.541 0 110 44 4 0 0 0 0.011173 1 13592 109.11 30.492 1 0.67474 0.76892 0 102440000 62862000 39581000 1590 785 601 618 2488 2488 AILGEQRPR 9 0 2 Unmodified _AILGEQRPR_ 0 0 1 Q9BQ70;H3BQ53;H3BSS3 Q9BQ70 Q9BQ70 TCF25 Transcription factor 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 347.2052 3 347.205085 1038.59343 99316 0.14977 5.2E-05 -0.019024 -6.6051E-06 0.13074 4.5395E-05 347.205025356071 353.877176197792 23.013 0.29559 23.013 22.869 23.164 -1.9073E-06 54 15 5 0 0 0 0.023027 1 8997 38.086 25.47 1 1.1618 1.29 0 9978900 4508900 5470000 1591 1996 602 619 2489 2489 AILGEQRPR 9 0 2 Unmodified _AILGEQRPR_ 0 0 1 Q9BQ70;H3BQ53;H3BSS3 Q9BQ70 Q9BQ70 TCF25 Transcription factor 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 347.2051 3 347.205085 1038.59343 103969.7 -0.023812 -8.2677E-06 0.01219 4.2325E-06 -0.011622 -4.0352E-06 347.205014606295 353.877220245026 22.544 0.37682 22.544 22.367 22.744 -1.9073E-06 56 14 6 0 0 0 0.009025 1 8556 51.066 32.394 1 1.1136 1.1069 0 7767300 3906800 3860500 1592 1996 602 619 2490 2490 AILIDWLVQVQMK 13 1 0 Oxidation (M) _AILIDWLVQVQM(ox)K_ AILIDWLVQVQM(1)K AILIDWLVQVQM(96.33)K 0 1 0 P14635;E9PC90;H1UBN2;H0YA62 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.9442 2 786.944544 1571.87454 NaN NaN NaN 0.28476 0.00022409 NaN NaN NaN NaN 128.36 0.31291 128.36 128.15 128.47 0 0 0 0 3.9825E-06 1 83679 96.331 77.06 1 NaN NaN 0 2710300 2710300 0 1593 1483 603 620 2491 2491 1240 AILIDWLVQVQMK 13 1 0 Oxidation (M) _AILIDWLVQVQM(ox)K_ AILIDWLVQVQM(1)K AILIDWLVQVQM(73.23)K 0 1 0 P14635;E9PC90;H1UBN2;H0YA62 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.9524 2 786.944544 1571.87454 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.27 1 128.27 127.77 128.77 -1.5259E-05 0 0 0 0.00066435 1 83643 73.233 47.847 1 1594 1483 603 620 2492 2492 1240 AILIDWLVQVQMK 13 1 0 Oxidation (M) _AILIDWLVQVQM(ox)K_ AILIDWLVQVQM(1)K AILIDWLVQVQM(84.21)K 0 1 0 P14635;E9PC90;H1UBN2;H0YA62 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.4837 2 786.944544 1571.87454 70165.23 1.112 0.00087507 -0.93875 -0.00073874 0.17324 0.00013633 786.944165308518 790.951811917133 127.99 0.34119 127.99 127.82 128.16 7.6294E-06 48 20 5 0 0 0 7.2239E-05 1 85470 84.213 79.963 1 0.86315 0.85646 0 6047700 3484800 2563000 1595 1483 603 620 2493 2493 1240 AILILDNDGDR 11 0 1 Unmodified _AILILDNDGDR_ 0 0 0 F8VXB1;F8VUC5;F8W156;F8W651;F8VXR1;F8VYZ4;Q53FU3;A0A024RB72;F8VVA7;P61923 F8VXB1 F8VXB1 COPZ1 Coatomer subunit zeta-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8271 2 607.822409 1213.63027 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.063 1 80.063 79.563 80.563 -7.6294E-06 0 0 0 0.00043973 1 48735 76.465 29.899 1 1596 325 604 621 2494 2494 AILLPDLSEPNNEPLFSPASEVPRK 25 1 1 Unmodified _AILLPDLSEPNNEPLFSPASEVPRK_ 0 0 1 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 918.1636 3 911.820108 2732.4385 64202.35 0.55416 0.0005053 0.33862 0.00030876 0.89278 0.00081406 912.154160438053 918.162520601379 117.57 0.41618 117.57 117.38 117.79 0 132 27 7 0 0 0 5.2937E-06 3 75234 37.56 32.952 1 1.1817 1.2747 0 14474000 6351100 8122800 1597 1945 605 622 2495;2496;2497 2495 AILLPDLSEPNNEPLFSPASEVPRK 25 1 1 Unmodified _AILLPDLSEPNNEPLFSPASEVPRK_ 0 0 1 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 917.8289 3 911.820108 2732.4385 64499.54 0.66201 0.00060363 -0.036907 -3.3653E-05 0.6251 0.00056998 912.154207954 918.161686952341 117.08 0.41804 117.08 116.85 117.26 0 116 24 8 0 0 0 8.211E-14 3 76682 83.606 83.606 1 1.2789 1.4445 0 15130000 8353000 6776600 1598 1945 605 622 2498;2499;2500 2499 AILLPDLSEPNNEPLFSPASEVPRK 25 1 1 Unmodified _AILLPDLSEPNNEPLFSPASEVPRK_ 0 0 1 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 912.4893 3 911.820108 2732.4385 63158.22 0.61297 0.00055891 -0.13093 -0.00011939 0.48203 0.00043953 912.15414823745 918.161774693628 129.28 0.43372 129.28 129.07 129.5 0 160 19 11 0 0 0 1.1184E-10 2 78178 61.616 61.616 1 1.806 1.5793 0 25375000 9639200 15736000 1599 1945 605 622 2501;2502 2502 AILLPDLSEPNNEPLFSPASEVPRK 25 1 1 Unmodified _AILLPDLSEPNNEPLFSPASEVPRK_ 0 0 1 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 918.1627 3 911.820108 2732.4385 63154.89 0.77062 0.00070267 -0.19991 -0.00018228 0.57071 0.00052039 912.153920737134 918.161800319382 129.15 0.52191 129.15 128.83 129.36 0 155 21 11 0 0 0 4.6535E-13 3 77208 74.062 74.062 1 1.7742 1.5047 0 18684000 7345700 11338000 1600 1945 605 622 2503;2504;2505 2504 AILMALR 7 0 1 Oxidation (M) _AILM(ox)ALR_ AILM(1)ALR AILM(44.61)ALR 0 1 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 407.2482 2 402.244024 802.473494 NaN NaN NaN 0.12968 5.2161E-05 NaN NaN NaN NaN 59.297 0.49771 59.297 59.031 59.529 -3.8147E-06 0 0 0 0.027406 1 33782 44.611 6.2401 1 NaN NaN 0 12041000 0 12041000 1601 1756 606 623 2506 2506 1622 AILMALR 7 0 1 Oxidation (M) _AILM(ox)ALR_ AILM(1)ALR AILM(44.61)ALR 0 1 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 407.248 2 402.244024 802.473494 94792.5 0.43581 0.0001753 -0.30591 -0.00012305 0.12991 5.2255E-05 402.243789418163 407.248044030371 58.824 0.62752 58.824 58.614 59.241 0 165 60 4 0 0 0 0.03765 1 34195 44.611 6.4088 1 1.3476 1.4016 0 22137000 9912300 12225000 1602 1756 606 623 2507 2507 1622 AILQATLR 8 0 1 Unmodified _AILQATLR_ 0 0 0 Q12904;D6R937;B4DNK3 Q12904 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.2843 2 443.279452 884.544351 NaN NaN NaN 0.57828 0.00025634 NaN NaN NaN NaN 58.856 0.38554 58.856 58.641 59.027 0 0 0 0 0.032517 1 34258 57.722 0.25064 1 NaN NaN 0 9967000 0 9967000 1603 1702 607 624 2508 2508 AILQENGCLSDSDMFSQAGLR 21 0 1 Oxidation (M) _AILQENGCLSDSDM(ox)FSQAGLR_ AILQENGCLSDSDM(1)FSQAGLR AILQENGCLSDSDM(45.12)FSQAGLR 0 1 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1169.5376 2 1164.53337 2327.05219 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.408 1 91.408 90.908 91.908 0 0 0 0 0.0021159 1 56579 45.115 35.064 1 1604 1207 608 625 2509 2509 919 AILVDLEPGTMDSVR 15 0 1 Oxidation (M) _AILVDLEPGTM(ox)DSVR_ AILVDLEPGTM(1)DSVR AILVDLEPGTM(114.72)DSVR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMJ5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q13885;B2R6L0;Q9BVA1;A5D907;A5D906;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.4231 2 816.419088 1630.82362 66276.51 0.83944 0.00068533 -0.16924 -0.00013817 0.6702 0.00054717 816.419316659938 821.423235521924 95.669 1.4098 95.669 95.167 96.577 0 811 117 11 0 0 0 1.9692E-10 4 58525 114.72 80.845 1 1.9769 2.3429 0 501570000 167260000 334320000 1605 1452;1723;502 609 626 2510;2511;2512;2513 2512 345 AILVDLEPGTMDSVR 15 0 1 Oxidation (M) _AILVDLEPGTM(ox)DSVR_ AILVDLEPGTM(1)DSVR AILVDLEPGTM(78.65)DSVR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMJ5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q13885;B2R6L0;Q9BVA1;A5D907;A5D906;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.4203 2 816.419088 1630.82362 65997.41 0.76703 0.00062622 -0.28328 -0.00023128 0.48375 0.00039494 816.419234505124 821.423142950423 94.909 1.3634 94.909 94.445 95.809 0 626 114 10 0 0 0 7.9048E-05 2 59355 78.653 53.798 1 2.1327 2.5084 0 975580000 313360000 662220000 1606 1452;1723;502 609 626 2514;2515 2515 345 AILVDLEPGTMDSVR 15 0 1 Oxidation (M) _AILVDLEPGTM(ox)DSVR_ AILVDLEPGTM(1)DSVR AILVDLEPGTM(129.34)DSVR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMJ5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q13885;B2R6L0;Q9BVA1;A5D907;A5D906;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.4257 2 816.419088 1630.82362 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.314 1 95.314 94.814 95.814 0 0 0 0 5.5972E-18 1 59330 129.34 89.426 1 1607 1452;1723;502 609 626 2516 2516 345 AILVDLEPGTMDSVR 15 0 1 Oxidation (M) _AILVDLEPGTM(ox)DSVR_ AILVDLEPGTM(1)DSVR AILVDLEPGTM(78.34)DSVR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMJ5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q13885;B2R6L0;Q9BVA1;A5D907;A5D906;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.9193 2 816.419088 1630.82362 66299.91 0.83324 0.00068027 -0.94214 -0.00076918 -0.1089 -8.8905E-05 816.91868988468 821.423444708412 108.77 1.7639 108.77 108.36 110.12 0 365 87 12 0 0 0 8.155E-05 2 62467 78.342 54.491 1 0.70741 0.60378 0 37605000 21058000 16547000 1608 1452;1723;502 609 626 2517;2518 2518 345 AILVDLEPGTMDSVR 15 0 1 Oxidation (M) _AILVDLEPGTM(ox)DSVR_ AILVDLEPGTM(1)DSVR AILVDLEPGTM(47.29)DSVR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMJ5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q13885;B2R6L0;Q9BVA1;A5D907;A5D906;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 821.4233 2 816.419088 1630.82362 66088.16 1.0041 0.00081976 0.23356 0.00019069 1.2377 0.0010104 816.419591027599 821.423244362117 119.24 0.4348 119.24 119.07 119.5 0 59 17 5 0 0 0 0.00077683 1 70542 47.288 23.301 1 1.7915 1.4831 0 11236000 4231500 7004300 1609 1452;1723;502 609 626 2519 2519 345 AILVDLEPGTMDSVR 15 0 1 Oxidation (M) _AILVDLEPGTM(ox)DSVR_ AILVDLEPGTM(1)DSVR AILVDLEPGTM(69.01)DSVR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMJ5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q13885;B2R6L0;Q9BVA1;A5D907;A5D906;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 821.424 2 816.419088 1630.82362 65502.36 0.87041 0.00071062 -0.15272 -0.00012468 0.71769 0.00058594 816.418697426069 821.423490788874 119.04 0.45689 119.04 118.77 119.23 0 54 17 5 0 0 0 0.00010823 1 69534 69.01 33.596 1 1.6227 1.3463 0 7762200 2058500 5703700 1610 1452;1723;502 609 626 2520 2520 345 AILVDLEPGTMDSVR 15 0 1 Oxidation (M) _AILVDLEPGTM(ox)DSVR_ AILVDLEPGTM(1)DSVR AILVDLEPGTM(67.08)DSVR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMJ5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q13885;B2R6L0;Q9BVA1;A5D907;A5D906;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 821.4235 2 816.419088 1630.82362 NaN NaN NaN -0.083822 -6.8434E-05 NaN NaN NaN NaN 108.65 0.83606 108.65 108.26 109.1 0 0 0 0 0.00029616 1 61451 67.08 33.194 1 NaN NaN 0 18950000 0 18950000 1611 1452;1723;502 609 626 2521 2521 345 AILVDLEPGTMDSVR 15 0 1 Unmodified _AILVDLEPGTMDSVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMJ5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q13885;B2R6L0;Q9BVA1;A5D907;A5D906;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.4269 2 808.42163 1614.82871 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.11 1 108.11 107.61 108.61 0 0 0 0 0.0015168 1 67455 66.262 39.476 1 1612 1452;1723;502 609 627 2522 2522 AILVDLEPGTMDSVR 15 0 1 Unmodified _AILVDLEPGTMDSVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMJ5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q13885;B2R6L0;Q9BVA1;A5D907;A5D906;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.4257 2 808.42163 1614.82871 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.55 1 107.55 107.05 108.05 0 0 0 0 0.0014416 1 68673 64.121 36.64 1 1613 1452;1723;502 609 627 2523 2523 AILVDLEPGTMDSVR 15 0 1 Unmodified _AILVDLEPGTMDSVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMJ5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q13885;B2R6L0;Q9BVA1;A5D907;A5D906;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 813.4253 2 808.42163 1614.82871 68710.52 0.89915 0.00072689 -0.60168 -0.00048641 0.29747 0.00024048 808.421053806798 813.425412691781 119.24 0.44768 119.24 119.02 119.47 7.6294E-06 76 18 5 0 0 0 4.4304E-10 2 70568 113.77 80.542 1 1.3375 1.1285 0 28995000 7774400 21220000 1614 1452;1723;502 609 627 2524;2525 2525 AILVDLEPGTMDSVR 15 0 1 Unmodified _AILVDLEPGTMDSVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMJ5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q13885;B2R6L0;Q9BVA1;A5D907;A5D906;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 813.4257 2 808.42163 1614.82871 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.02 1 119.02 118.52 119.52 0 0 0 0 3.5184E-07 1 69509 102.62 72.29 1 1615 1452;1723;502 609 627 2526 2526 AILVVFANK 9 1 0 Unmodified _AILVVFANK_ 0 0 0 F8VYN9;P40616;B4DZG7 F8VYN9 F8VYN9 ARL1 ADP-ribosylation factor-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.8128 2 487.805303 973.596052 89484.45 0.57981 0.00028283 0.65848 0.00032121 1.2383 0.00060404 487.805345085742 491.812707991031 91.268 0.74425 91.268 91 91.744 0 139 59 4 0 0 0 0.0018844 2 55119 79.597 79.597 1 2.5132 2.6032 0 11211000 3610700 7600400 1616 1262 610 628 2527;2528 2527 AIMLGAKPPKK 11 3 0 Oxidation (M) _AIM(ox)LGAKPPKK_ AIM(1)LGAKPPKK AIM(44.35)LGAKPPKK 0 1 2 Q8NDD1;Q5TBH9;Q5TBI2;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.3791 2 585.357376 1168.7002 78249.17 0.58542 0.00034268 -2.7912 -0.0016338 -2.2057 -0.0012911 585.357322529129 597.87567606459 21.7 0.27849 21.7 21.567 21.845 0 46 14 4 0 0 0 0.0065333 1 7824 44.349 44.349 1 1.7212 2.0119 0 9272100 2846900 6425200 1617 1925 611 629 2529 2529 1754 AINCATSGVVGLVNCLR 17 0 1 Unmodified _AINCATSGVVGLVNCLR_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.9692 2 902.463838 1802.91312 NaN NaN NaN 1.1791 0.0010641 NaN NaN NaN NaN 109.75 0.27452 109.75 109.58 109.86 0 0 0 0 0.006072 1 68752 48.948 34.713 1 NaN NaN 0 3376700 0 3376700 1618 587 612 630 2530 2530 AINCATSGVVGLVNCLR 17 0 1 Unmodified _AINCATSGVVGLVNCLR_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 902.9649 2 902.463838 1802.91312 NaN NaN NaN 0.14847 0.00013399 NaN NaN NaN NaN 121.35 0.33244 121.35 121.19 121.52 -7.6294E-06 0 0 0 5.2272E-05 1 72206 74.46 59.194 1 NaN NaN 0 3063700 3063700 0 1619 587 612 630 2531 2531 AINCATSGVVGLVNCLR 17 0 1 Unmodified _AINCATSGVVGLVNCLR_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 902.9687 2 902.463838 1802.91312 NaN NaN NaN -0.046051 -4.1559E-05 NaN NaN NaN NaN 121.15 0.28125 121.15 121.01 121.29 0 0 0 0 0.018404 1 71117 40.377 27.397 1 NaN NaN 0 1975500 1975500 0 1620 587 612 630 2532 2532 AINIGQLVDVK 11 1 0 Unmodified _AINIGQLVDVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.3486 2 585.348063 1168.68157 79467.19 0.6545 0.00038311 0.57313 0.00033548 1.2276 0.00071859 585.348318515704 589.355449279289 103.72 0.84634 103.72 103.42 104.26 0 350 67 8 0 0 0 5.5799E-08 2 64005 116.52 75.794 1 1.075 1.2067 0 67642000 30946000 36695000 1621 1741 613 631 2533;2534 2534 AINIGQLVDVK 11 1 0 Unmodified _AINIGQLVDVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.3555 2 585.348063 1168.68157 79420.99 0.75103 0.00043961 0.71661 0.00041947 1.4676 0.00085908 585.34835405619 589.355596879702 102.95 0.89227 102.95 102.68 103.57 -7.6294E-06 325 70 8 0 0 0 5.7131E-08 2 65040 116.3 78.218 1 1.0542 1.1783 0 98593000 46923000 51670000 1622 1741 613 631 2535;2536 2535 AINLLSGLGPNGQSK 15 1 0 Unmodified _AINLLSGLGPNGQSK_ 0 0 0 REV__B3KRV8 REV__B3KRV8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.9163 2 734.909547 1467.80454 73159.22 0.88557 0.00065081 -0.84186 -0.00061869 0.043705 3.2119E-05 734.909394477203 738.91575520481 82.106 0.62027 82.106 81.764 82.384 0 261 53 7 0 0 0 0.0002234 1 48896 69.01 69.01 1 3.2229 3.4876 0 43265000 12601000 30664000 + 1623 2170 614 632 2537 2537 AINQQTGAFVEISR 14 0 1 Unmodified _AINQQTGAFVEISR_ 0 0 0 A0A087WTP3;Q92945;M0R3J3 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.4109 2 767.404629 1532.79471 NaN NaN NaN -0.15462 -0.00011865 NaN NaN NaN NaN 73.861 0.52962 73.861 73.573 74.103 0 0 0 0 2.4958E-16 2 43348 130.56 96.687 1 NaN NaN 0 7175200 0 7175200 1624 403 615 633 2538;2539 2539 AINQQTGAFVEISR 14 0 1 Unmodified _AINQQTGAFVEISR_ 0 0 0 A0A087WTP3;Q92945;M0R3J3 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.4115 2 767.404629 1532.79471 69306.37 0.68705 0.00052725 0.084691 6.4992E-05 0.77174 0.00059224 767.405088252661 772.408768363017 72.74 0.52274 72.74 72.469 72.992 -7.6294E-06 96 45 4 0 0 0 3.7239E-21 3 43618 144.1 144.1 1 1.4727 1.4596 0 15703000 7042600 8660200 1625 403 615 633 2540;2541;2542 2541 AINQQTGAFVEISR 14 0 1 Unmodified _AINQQTGAFVEISR_ 0 0 0 A0A087WTP3;Q92945;M0R3J3 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.4051 2 767.404629 1532.79471 71104.76 0.57882 0.00044419 -0.507 -0.00038907 0.071822 5.5116E-05 767.404902011938 772.408445622858 84.4 0.44507 84.4 84.201 84.646 7.6294E-06 113 33 5 0 0 0 0.051643 1 46131 25.014 21.886 1 0.97507 0.82532 0 2954200 1127300 1827000 1626 403 615 633 2543 2543 AINTLNGLR 9 0 1 Unmodified _AINTLNGLR_ 0 0 0 Q15717;M0QZR9;B1AM48;B7Z5E0;B1APY9;B1APY8;A0A0A0MRX1;A0A0R4J2E6;Q12926;P26378 Q15717 Q15717 ELAVL1;ELAVL2;ELAVL4 ELAV-like protein 1;ELAV-like protein;ELAV-like protein 2;ELAV-like protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.2888 2 486.285266 970.555979 88288.81 -0.052551 -2.5555E-05 0.91708 0.00044596 0.86453 0.00042041 486.284866549738 491.289373654796 52.343 0.54491 52.343 52.102 52.647 -3.8147E-06 143 40 5 0 0 0 0.00079176 2 28989 94.302 41.136 1 1.4563 1.5047 0 23713000 8742400 14971000 1627 1764 616 634 2544;2545 2544 AINTLNGLR 9 0 1 Unmodified _AINTLNGLR_ 0 0 0 Q15717;M0QZR9;B1AM48;B7Z5E0;B1APY9;B1APY8;A0A0A0MRX1;A0A0R4J2E6;Q12926;P26378 Q15717 Q15717 ELAVL1;ELAVL2;ELAVL4 ELAV-like protein 1;ELAV-like protein;ELAV-like protein 2;ELAV-like protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.2856 2 486.285266 970.555979 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.89 1 50.89 50.39 51.39 0 0 0 0 0.027045 1 28777 53.968 2.1807 1 1628 1764 616 634 2546 2546 AINTLNGLR 9 0 1 Unmodified _AINTLNGLR_ 0 0 0 Q15717;M0QZR9;B1AM48;B7Z5E0;B1APY9;B1APY8;A0A0A0MRX1;A0A0R4J2E6;Q12926;P26378 Q15717 Q15717 ELAVL1;ELAVL2;ELAVL4 ELAV-like protein 1;ELAV-like protein;ELAV-like protein 2;ELAV-like protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.2856 2 486.285266 970.555979 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.08 1 51.08 50.58 51.58 -3.8147E-06 0 0 0 0.01904 1 28909 56.547 19.453 1 1629 1764 616 634 2547 2547 AIPLALEGK 9 1 0 Unmodified _AIPLALEGK_ 0 0 0 Q9NY93;Q53HB9;G3V0G3;F8WDT8;F8WEI3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.2903 2 456.28166 910.548768 90030.45 0.33266 0.00015178 -0.081011 -3.6964E-05 0.25164 0.00011482 456.281501910474 460.288867005751 71.776 0.94876 71.776 71.243 72.191 0 350 81 6 0 0 0 0.0057716 2 41973 65.88 37.905 1 0.91879 1.0076 0 52966000 28390000 24576000 1630 2081 617 635 2548;2549 2549 AIPLALEGK 9 1 0 Unmodified _AIPLALEGK_ 0 0 0 Q9NY93;Q53HB9;G3V0G3;F8WDT8;F8WEI3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.2814 2 456.28166 910.548768 89323.78 0.23919 0.00010914 -0.35976 -0.00016415 -0.12057 -5.5013E-05 456.281416744366 460.288744132106 70.466 0.84375 70.466 69.989 70.833 0 292 69 6 0 0 0 0.0070864 2 42226 62.546 36.652 1 0.92919 1.0463 0 57892000 30343000 27549000 1631 2081 617 635 2550;2551 2551 AIPQLQGYLR 10 0 1 Unmodified _AIPQLQGYLR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.8357 2 579.835123 1157.65569 78707.08 0.62822 0.00036427 0.13005 7.5409E-05 0.75828 0.00043967 579.835149173889 584.839344800784 90.046 1.3649 90.046 89.608 90.972 0 565 112 10 0 0 0 5.5216E-08 4 54630 114.78 100.78 1 0.96479 1.1464 0 1033100000 554660000 478420000 1632 342 618 636 2552;2553;2554;2555 2553 AIPQLQGYLR 10 0 1 Unmodified _AIPQLQGYLR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8397 2 579.835123 1157.65569 78392.96 0.71988 0.00041741 -0.038625 -2.2396E-05 0.68125 0.00039501 579.835194122743 584.839210075593 89.112 1.1809 89.112 88.709 89.89 0 562 97 10 0 0 0 8.5968E-05 4 54811 97.798 75.109 1 0.93518 1.1085 0 1823600000 977020000 846560000 1633 342 618 636 2556;2557;2558;2559 2557 AIPQLQGYLR 10 0 1 Unmodified _AIPQLQGYLR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.8396 2 579.835123 1157.65569 79669.83 0.52122 0.00030222 0.081349 4.7169E-05 0.60257 0.00034939 579.835359410515 584.83924811198 103.37 1.4148 103.37 103.13 104.55 7.6294E-06 402 92 10 0 0 0 0.0036667 3 58639 63.48 63.48 1 0.78915 0.68583 0 257300000 134890000 122410000 1634 342 618 636 2560;2561;2562 2560 AIPQLQGYLR 10 0 1 Unmodified _AIPQLQGYLR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.8353 2 579.835123 1157.65569 78785.95 0.2702 0.00015667 -0.00028814 -1.6708E-07 0.26991 0.0001565 579.835270120886 584.839186844578 103.19 1.4667 103.19 102.91 104.37 0 516 98 10 0 0 0 0.0008968 4 57696 79.469 71.989 1 0.8217 0.71764 0 180500000 98509000 81986000 1635 342 618 636 2563;2564;2565;2566 2564 AIPTVNHSGTFSPQAPVPTTVPVVDVR 27 0 1 Unmodified _AIPTVNHSGTFSPQAPVPTTVPVVDVR_ 0 0 0 Q16513;B1AL79 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.8351 3 929.499369 2785.47628 64546.96 0.80648 0.00074962 0.27954 0.00025983 1.086 0.0010094 929.833908630504 933.169175081206 107.2 0.36817 107.2 107.02 107.39 7.6294E-06 114 27 6 0 0 0 0.0031222 2 66744 23.566 23.566 1 2.1728 2.2122 0 9899300 3478800 6420500 1636 1769 619 637 2567;2568 2568 AIPTVNHSGTFSPQAPVPTTVPVVDVR 27 0 1 Unmodified _AIPTVNHSGTFSPQAPVPTTVPVVDVR_ 0 0 0 Q16513;B1AL79 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 933.1687 3 929.499369 2785.47628 63892.38 0.69101 0.00064229 0.35986 0.00033449 1.0509 0.00097679 930.167656034986 933.169546921511 106.57 0.41077 106.57 106.37 106.78 0 148 31 7 0 0 0 0.0091823 2 67807 21.699 21.699 1 2.1675 2.1706 0 18818000 7432300 11386000 1637 1769 619 637 2569;2570 2569 AIQDAILEVLK 11 1 0 Unmodified _AIQDAILEVLK_ 0 0 0 Q86Y56;B3KU91;H0Y650;E9PGY2;B3KNN3;B3KPE2;A0A024R803 Q86Y56 Q86Y56 DNAAF5;FLJ20397 Dynein assembly factor 5, axonemal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.8704 2 606.863546 1211.71254 83027.98 0.93231 0.00056579 -0.24911 -0.00015117 0.6832 0.00041461 606.863431708255 610.870402620587 121.59 0.47085 121.59 121.37 121.84 0 67 30 4 0 0 0 0.00031294 1 78542 87.913 49.621 1 2.0727 2.199 0 3727500 1262000 2465500 1638 1888 620 638 2571 2571 AIQDAILEVLK 11 1 0 Unmodified _AIQDAILEVLK_ 0 0 0 Q86Y56;B3KU91;H0Y650;E9PGY2;B3KNN3;B3KPE2;A0A024R803 Q86Y56 Q86Y56 DNAAF5;FLJ20397 Dynein assembly factor 5, axonemal ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.8712 2 606.863546 1211.71254 NaN NaN NaN -0.1067 -6.4751E-05 NaN NaN NaN NaN 121.11 0.40271 121.11 120.9 121.31 0 0 0 0 1.4563E-08 1 80169 116.3 64.309 1 NaN NaN 0 3583800 0 3583800 1639 1888 620 638 2572 2572 AIQDAILEVLK 11 1 0 Unmodified _AIQDAILEVLK_ 0 0 0 Q86Y56;B3KU91;H0Y650;E9PGY2;B3KNN3;B3KPE2;A0A024R803 Q86Y56 Q86Y56 DNAAF5;FLJ20397 Dynein assembly factor 5, axonemal ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.872 2 606.863546 1211.71254 NaN NaN NaN -0.3235 -0.00019632 NaN NaN NaN NaN 134 0.27731 134 133.88 134.16 0 0 0 0 0.0066001 1 81698 63.426 25.134 1 NaN NaN 0 367020 0 367020 1640 1888 620 638 2573 2573 AIQGGTSHHLGQNFSK 16 1 0 Unmodified _AIQGGTSHHLGQNFSK_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.9567 3 561.285015 1680.83322 80904.04 0.7159 0.00040182 -0.46237 -0.00025952 0.25353 0.0001423 561.285259590323 563.956114746983 22.683 0.43596 22.683 22.56 22.996 0 101 25 7 0 0 0 0.00011568 1 8690 51.695 51.695 1 2.738 2.8722 0 15241000 2946400 12294000 1641 1454 621 639 2574 2574 AIQGGTSHHLGQNFSK 16 1 0 Unmodified _AIQGGTSHHLGQNFSK_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.4315 2 841.423884 1680.83322 69580.05 0.58267 0.00049027 -0.3255 -0.00027388 0.25717 0.00021639 841.92584441723 845.430703983006 21.641 0.21183 21.641 21.567 21.779 -1.9073E-06 29 11 4 0 0 0 2.1077E-06 1 7756 88.021 88.021 1 2.2905 2.3296 0 12543000 3486800 9056500 1642 1454 621 639 2575 2575 AIQGGTSHHLGQNFSK 16 1 0 Unmodified _AIQGGTSHHLGQNFSK_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.9566 3 561.285015 1680.83322 81263.31 0.6001 0.00033683 -0.39431 -0.00022132 0.20579 0.00011551 561.284687465069 563.956196904717 24.476 0.3366 24.476 24.298 24.634 0 73 17 7 0 0 0 0.0049939 1 8628 30.575 30.575 1 1.2566 1.059 0 2119300 1036400 1082900 1643 1454 621 639 2576 2576 AIQGGTSHHLGQNFSK 16 1 0 Unmodified _AIQGGTSHHLGQNFSK_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.9563 3 561.285015 1680.83322 80670.98 0.50301 0.00028233 -0.29035 -0.00016297 0.21266 0.00011936 561.28451210162 563.956290646615 24.221 0.35264 24.221 24.071 24.424 0 87 19 6 0 0 0 0.0082455 2 7959 25.365 25.365 1 1.0888 0.90134 0 1652400 846460 805890 1644 1454 621 639 2577;2578 2578 AIQHLWAAIEIIR 13 0 1 Unmodified _AIQHLWAAIEIIR_ 0 0 0 Q15326;E7ENI9;B0QZE2;B7Z2J6;E7EV75;E9PE09 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.3042 3 511.968187 1532.88273 87326.73 0.75394 0.000386 -0.55012 -0.00028164 0.20383 0.00010435 512.302151434215 515.303889433747 122.94 0.3214 122.94 122.74 123.06 0 42 15 4 0 0 0 0.00076467 1 73391 40.477 40.477 1 1.3316 1.1744 0 1620000 669120 950900 1645 1758 622 640 2579 2579 AIQHLWAAIEIIR 13 0 1 Unmodified _AIQHLWAAIEIIR_ 0 0 0 Q15326;E7ENI9;B0QZE2;B7Z2J6;E7EV75;E9PE09 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.6389 3 511.968187 1532.88273 89038.27 0.70325 0.00036004 -0.30644 -0.00015689 0.39681 0.00020315 512.302308544078 515.304071361926 122.68 0.29737 122.68 122.53 122.82 0 32 14 5 0 0 0 0.058918 1 72315 11.045 11.045 1 1.3245 1.1404 0 1132200 597910 534260 1646 1758 622 640 2580 2580 AIQTGEELFFDYR 13 0 1 Unmodified _AIQTGEELFFDYR_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.8873 2 794.885738 1587.75692 69310.89 0.9863 0.000784 0.12721 0.00010112 1.1135 0.00088511 794.885373875141 799.889750106309 106.66 0.70454 106.66 106.34 107.05 -7.6294E-06 275 53 7 0 0 0 9.4817E-06 2 67872 100.72 100.72 1 1.1015 1.2059 0 32752000 14172000 18580000 1647 456 623 641 2581;2582 2582 AIQTGEELFFDYR 13 0 1 Unmodified _AIQTGEELFFDYR_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 794.889 2 794.885738 1587.75692 NaN NaN NaN 0.05684 4.5181E-05 NaN NaN NaN NaN 118.63 0.59587 118.63 118.36 118.95 0 0 0 0 0.018463 1 70000 48.741 32.487 1 NaN NaN 0 4048600 4048600 0 1648 456 623 641 2583 2583 AIQTGEELFFDYR 13 0 1 Unmodified _AIQTGEELFFDYR_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.8909 2 794.885738 1587.75692 68977.16 0.81555 0.00064827 0.13578 0.00010793 0.95134 0.0007562 794.885492059371 799.88987619753 118.49 0.705 118.49 118.18 118.88 0 170 34 7 0 0 0 4.4222E-05 3 68991 97.214 71.828 1 1.934 1.5876 0 8740700 3346700 5394000 1649 456 623 641 2584;2585;2586 2584 AIRPQIDLK 9 1 1 Unmodified _AIRPQIDLK_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 351.8852 3 351.885353 1052.63423 99667.25 0.35719 0.00012569 -0.048859 -1.7193E-05 0.30833 0.0001085 351.88531469459 357.892722929162 46.375 0.56477 46.375 46.086 46.651 0 207 42 7 0 0 0 0.019671 1 25499 40.994 20.997 1 0.5873 0.69245 0 107660000 72531000 35130000 1650 1665 624 642 2587 2587 AIRPQIDLK 9 1 1 Unmodified _AIRPQIDLK_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.3249 2 527.324391 1052.63423 83203.64 0.59761 0.00031514 -0.064127 -3.3816E-05 0.53349 0.00028132 527.324375144802 536.335545810576 46.385 0.4785 46.385 46.134 46.612 0 140 35 6 0 0 0 0.021182 2 25521 72.23 33.811 1 0.66696 0.77859 0 47286000 32064000 15222000 1651 1665 624 642 2588;2589 2589 AISAANLHLR 10 0 1 Unmodified _AISAANLHLR_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 355.8771 3 355.876969 1064.60908 99451.91 0.45022 0.00016022 0.21429 7.6259E-05 0.6645 0.00023648 355.876944106842 359.213095722772 49.406 0.41678 49.406 49.233 49.649 -3.8147E-06 119 26 6 0 0 0 7.6594E-05 2 27070 74.173 38.521 1 0.98952 1.1295 0 122340000 63712000 58624000 1652 1854 625 643 2590;2591 2590 AISAANLHLR 10 0 1 Unmodified _AISAANLHLR_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 355.8767 3 355.876969 1064.60908 100074.5 -0.21532 -7.6628E-05 -0.18953 -6.7451E-05 -0.40486 -0.00014408 355.876824996076 359.212942992991 47.772 0.35416 47.772 47.592 47.946 0 120 25 7 0 0 0 1.8359E-08 2 26572 93.649 51.313 1 0.96652 1.1029 0 143110000 77936000 65173000 1653 1854 625 643 2592;2593 2593 AISAANLHLR 10 0 1 Unmodified _AISAANLHLR_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.3116 2 533.311815 1064.60908 83846.39 0.12966 6.9148E-05 -0.84937 -0.00045298 -0.71971 -0.00038383 533.31106136766 538.315704796918 47.772 0.47529 47.772 47.63 48.106 0 77 33 4 0 0 0 1.5198E-05 1 26595 101.33 65.889 1 0.94201 1.0344 0 40425000 22520000 17905000 1654 1854 625 643 2594 2594 AISAANLHLR 10 0 1 Unmodified _AISAANLHLR_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 355.8769 3 355.876969 1064.60908 100410.3 0.072434 2.5778E-05 -0.12426 -4.4221E-05 -0.051824 -1.8443E-05 355.876890305297 359.212938082816 56.852 0.36837 56.852 56.669 57.038 0 101 24 6 0 0 0 0.048243 1 28750 18.745 7.8399 1 0.80417 0.67811 0 4716200 2870400 1845900 1655 1854 625 643 2595 2595 AISAANLHLR 10 0 1 Unmodified _AISAANLHLR_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.3157 2 533.311815 1064.60908 82350.63 0.58948 0.00031438 -0.53597 -0.00028584 0.053513 2.8539E-05 533.311399247374 538.315803743854 57.078 0.36348 57.078 56.929 57.292 0 71 21 5 0 0 0 0.033135 1 28180 39.022 7.9482 1 0.78278 0.68181 0 1804100 1122500 681580 1656 1854 625 643 2596 2596 AISALVPQGGPVLCR 15 0 1 Unmodified _AISALVPQGGPVLCR_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.4323 2 769.429593 1536.84463 70625.42 0.70111 0.00053945 -0.1952 -0.00015019 0.50591 0.00038926 769.429824819814 774.432438514087 95.046 0.41972 95.046 94.812 95.232 0 101 36 4 0 0 0 0.00077488 1 59128 50.284 31.305 1 0.72871 0.73143 0 11217000 5440600 5776400 1657 1223 626 644 2597 2597 AISGVHTVR 9 0 1 Unmodified _AISGVHTVR_ 0 0 0 P41091;Q2VIR3;F8W810;H7BZU1 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 317.1863 3 313.850531 938.529764 106518.6 -0.02101 -6.5941E-06 -0.46024 -0.00014445 -0.48126 -0.00015104 313.850383468034 317.186377297468 20.08 0.29319 20.08 20.001 20.295 0 22 8 5 0 0 0 0.042516 1 6607 20.287 5.1361 1 1.9241 1.9504 0 15159000 5775200 9383400 1658 1559 627 645 2598 2598 AISGVHTVR 9 0 1 Unmodified _AISGVHTVR_ 0 0 0 P41091;Q2VIR3;F8W810;H7BZU1 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 313.8505 3 313.850531 938.529764 107258.2 0.15731 4.9371E-05 -0.50051 -0.00015708 -0.3432 -0.00010771 313.850406492295 317.186372201716 19.904 0.23225 19.904 19.785 20.018 -1.9073E-06 37 9 7 0 0 0 0.033037 2 6287 29.667 19.756 1 1.7024 1.7346 0 20595000 7160500 13435000 1659 1559 627 645 2599;2600 2600 AISSTEAVLNNR 12 0 1 Unmodified _AISSTEAVLNNR_ 0 0 0 D3DQF6;B3KY61;U3KPZ7;Q9P2N5;A0A087X0H9;Q5T8P6 D3DQF6 D3DQF6 POU4F3;RBM27;RBM26 RNA-binding protein 27;RNA-binding protein 26 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.8419 2 637.838591 1273.66263 NaN NaN NaN 0.015461 9.8615E-06 NaN NaN NaN NaN 54.558 0.30524 54.558 54.441 54.747 3.8147E-06 0 0 0 0.025253 1 27190 49.3 29.539 1 NaN NaN 0 491530 0 491530 1660 958 628 646 2601 2601 AISSTEAVLNNR 12 0 1 Unmodified _AISSTEAVLNNR_ 0 0 0 D3DQF6;B3KY61;U3KPZ7;Q9P2N5;A0A087X0H9;Q5T8P6 D3DQF6 D3DQF6 POU4F3;RBM27;RBM26 RNA-binding protein 27;RNA-binding protein 26 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.838 2 637.838591 1273.66263 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.593 1 54.593 54.093 55.093 0 0 0 0 0.018488 1 27248 52.278 29.538 1 1661 958 628 646 2602 2602 AISSTEAVLNNR 12 0 1 Unmodified _AISSTEAVLNNR_ 0 0 0 D3DQF6;B3KY61;U3KPZ7;Q9P2N5;A0A087X0H9;Q5T8P6 D3DQF6 D3DQF6 POU4F3;RBM27;RBM26 RNA-binding protein 27;RNA-binding protein 26 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.8423 2 637.838591 1273.66263 NaN NaN NaN 0.31915 0.00020357 NaN NaN NaN NaN 55.057 0.28767 55.057 54.907 55.195 0 0 0 0 0.041597 1 26923 43.297 30.507 1 NaN NaN 0 379530 0 379530 1662 958 628 646 2603 2603 AISSTEAVLNNR 12 0 1 Unmodified _AISSTEAVLNNR_ 0 0 0 D3DQF6;B3KY61;U3KPZ7;Q9P2N5;A0A087X0H9;Q5T8P6 D3DQF6 D3DQF6 POU4F3;RBM27;RBM26 RNA-binding protein 27;RNA-binding protein 26 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.8387 2 637.838591 1273.66263 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.09 1 55.09 54.59 55.59 -3.8147E-06 0 0 0 0.0059183 1 26950 62.823 40.083 1 1663 958 628 646 2604 2604 AISSYFVSTMSSSIK 15 1 0 Oxidation (M) _AISSYFVSTM(ox)SSSIK_ AISSYFVSTM(1)SSSIK AISSYFVSTM(151.26)SSSIK 0 1 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.4081 2 812.400363 1622.78617 65321.81 0.37574 0.00030525 0.4246 0.00034494 0.80033 0.00065019 812.400743584156 816.407755100863 81.375 1.5361 81.375 80.897 82.433 0 991 133 12 0 0 0 1.2948E-30 4 48304 151.26 151.26 1 1.4497 1.7375 0 971950000 391080000 580860000 1664 1401 629 647 2605;2606;2607;2608 2605 1078 AISSYFVSTMSSSIK 15 1 0 Oxidation (M) _AISSYFVSTM(ox)SSSIK_ AISSYFVSTM(1)SSSIK AISSYFVSTM(103.44)SSSIK 0 1 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.4083 2 812.400363 1622.78617 65961.96 0.62933 0.00051127 0.23911 0.00019425 0.86844 0.00070552 812.400631903255 816.407546481492 80.307 1.4719 80.307 79.918 81.39 -7.6294E-06 803 121 11 0 0 0 2.1921E-07 3 48740 103.44 103.44 1 1.4426 1.7027 0 948360000 389080000 559280000 1665 1401 629 647 2609;2610;2611 2609 1078 AISSYFVSTMSSSIK 15 1 0 Oxidation (M) _AISSYFVSTM(ox)SSSIK_ AISSYFVSTM(1)SSSIK AISSYFVSTM(63.09)SSSIK 0 1 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.4006 2 812.400363 1622.78617 65441.76 0.65904 0.00053541 0.24583 0.00019971 0.90487 0.00073512 812.400698211521 816.407601121374 93.536 1.7328 93.536 92.982 94.714 0 788 109 13 0 0 0 0.00010639 4 52088 72.496 72.496 1 0.71743 0.62668 0 175080000 99148000 75935000 1666 1401 629 647 2612;2613;2614;2615 2612 1078 AISSYFVSTMSSSIK 15 1 0 Oxidation (M) _AISSYFVSTM(ox)SSSIK_ AISSYFVSTM(1)SSSIK AISSYFVSTM(94.19)SSSIK 0 1 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.4014 2 812.400363 1622.78617 66605.45 0.79095 0.00064256 -0.14846 -0.00012061 0.64249 0.00052196 812.400090128214 816.407275946093 116.13 0.78166 116.13 115.67 116.45 -7.6294E-06 175 32 9 0 0 0 4.0746E-06 3 68121 94.191 76.383 1 1.395 1.1413 0 34801000 13824000 20977000 1667 1401 629 647 2616;2617;2618 2618 1078 AISSYFVSTMSSSIK 15 1 0 Oxidation (M) _AISSYFVSTM(ox)SSSIK_ AISSYFVSTM(1)SSSIK AISSYFVSTM(79.63)SSSIK 0 1 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 816.4082 2 812.400363 1622.78617 65323.62 0.58476 0.00047506 0.03076 2.4989E-05 0.61552 0.00050005 812.400576883222 816.407440821431 93.49 1.8545 93.49 92.878 94.733 0 792 119 13 0 0 0 7.116E-05 3 51199 79.633 79.633 1 0.72953 0.62806 0 172980000 104600000 68379000 1668 1401 629 647 2619;2620;2621 2620 1078 AISSYFVSTMSSSIK 15 1 0 Oxidation (M) _AISSYFVSTM(ox)SSSIK_ AISSYFVSTM(1)SSSIK AISSYFVSTM(62.92)SSSIK 0 1 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 816.4083 2 812.400363 1622.78617 67151.77 0.91155 0.00074054 -0.14943 -0.0001214 0.76211 0.00061914 812.400153013283 816.407359679502 115.95 0.7739 115.95 115.55 116.32 7.6294E-06 180 36 8 0 0 0 0.00010633 2 67025 66.498 62.924 1 1.3087 1.0529 0 22666000 8787000 13879000 1669 1401 629 647 2622;2623 2622 1078 AISSYFVSTMSSSIK 15 1 0 Unmodified _AISSYFVSTMSSSIK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 808.4109 2 804.402906 1606.79126 66916.69 0.82047 0.00065999 -0.10108 -8.1312E-05 0.71938 0.00057867 804.402890240847 808.40986184499 104.17 0.69671 104.17 103.89 104.58 0 298 57 6 0 0 0 2.1133E-07 2 64247 108.37 108.37 1 0.80731 0.7945 0 23953000 13776000 10178000 1670 1401 629 648 2624;2625 2625 AISSYFVSTMSSSIK 15 1 0 Unmodified _AISSYFVSTMSSSIK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.4041 2 804.402906 1606.79126 NaN NaN NaN 0.57192 0.00046005 NaN NaN NaN NaN 103.38 0.66615 103.38 103.13 103.79 0 0 0 0 2.5246E-05 1 65281 88.021 66.262 1 NaN NaN 0 23884000 23884000 0 1671 1401 629 648 2626 2626 AISSYFVSTMSSSIK 15 1 0 Unmodified _AISSYFVSTMSSSIK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 808.4113 2 804.402906 1606.79126 66662.3 0.7331 0.00058971 -0.070652 -5.6832E-05 0.66245 0.00053288 804.403048564577 808.410033271692 116.11 0.88371 116.11 115.73 116.61 7.6294E-06 245 37 12 0 0 0 0.00021959 2 68059 63.091 63.091 1 1.4324 1.2379 0 109760000 45331000 64433000 1672 1401 629 648 2627;2628 2628 AISSYFVSTMSSSIK 15 1 0 Unmodified _AISSYFVSTMSSSIK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 804.4033 2 804.402906 1606.79126 66851.73 0.82086 0.0006603 0.049584 3.9886E-05 0.87044 0.00070019 804.403125090493 808.410069974725 115.92 1.0619 115.92 115.47 116.53 7.6294E-06 278 49 11 0 0 0 0.00010156 2 66994 82.362 82.362 1 1.4286 1.2183 0 94716000 38929000 55787000 1673 1401 629 648 2629;2630 2630 AISVHSTPEGCSSACK 16 1 0 Unmodified _AISVHSTPEGCSSACK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.8875 2 845.879804 1689.74505 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.96 1 21.96 21.46 22.46 -1.9073E-06 0 0 0 5.2343E-18 1 8134 120.57 100.81 1 1674 2087 630 649 2631 2631 AISVHSTPEGCSSACK 16 1 0 Unmodified _AISVHSTPEGCSSACK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.8888 2 845.879804 1689.74505 65616.89 0.54186 0.00045835 1.2274 0.0010382 1.7692 0.0014966 845.879858234724 849.888517262372 21.814 0.17029 21.814 21.744 21.915 0 29 7 6 0 0 0 1.1755E-24 2 7888 167.71 167.71 1 3.0001 3.0752 0 9425300 2604600 6820700 1675 2087 630 649 2632;2633 2632 AISVHSTPEGCSSACK 16 1 0 Unmodified _AISVHSTPEGCSSACK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.9271 3 564.255628 1689.74505 79574.41 0.45761 0.00025821 -0.51477 -0.00029046 -0.057166 -3.2256E-05 564.589769513066 566.926990885134 21.821 0.27651 21.821 21.696 21.972 0 54 12 8 0 0 0 1.9209E-05 1 7933 82.59 82.59 1 2.7325 2.8598 0 19386000 5212300 14174000 1676 2087 630 649 2634 2634 AISYHLVQK 9 1 0 Unmodified _AISYHLVQK_ 0 0 0 D3DVL7;B4DU42;Q969Z0;C9IZN7;B3KRS4;B3KMT3;C9J7P5 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.8112 2 529.803291 1057.59203 NaN NaN NaN 0.86632 0.00045898 NaN NaN NaN NaN 36.844 0.36573 36.844 36.71 37.075 0 0 0 0 0.02366 1 18680 56.014 35.459 1 NaN NaN 0 7356200 0 7356200 1677 1036 631 650 2635 2635 AITAMGFK 8 1 0 Oxidation (M) _AITAM(ox)GFK_ AITAM(1)GFK AITAM(49.36)GFK 0 1 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 431.733 2 427.725664 853.436775 93941.35 0.25564 0.00010934 0.27789 0.00011886 0.53353 0.00022821 427.725728342014 431.732898725044 35.85 0.79667 35.85 35.478 36.274 0 219 75 4 0 0 0 0.016766 1 18019 49.358 38.063 1 1.1865 1.2716 0 32540000 12090000 20450000 1678 899;1099 632 651 2636 2636 719 AITFFTEDDKPLLR 14 1 1 Unmodified _AITFFTEDDKPLLR_ 0 0 1 Q9Y2R4;B3KM65;A0A087X121 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.9669 3 555.966401 1664.87737 82813.76 0.79362 0.00044123 -0.0099408 -5.5268E-06 0.78368 0.0004357 555.966402210984 561.973750786564 111.99 0.47849 111.99 111.84 112.32 0 128 29 7 0 0 0 0.01769 1 65058 28.779 28.779 1 1.1891 1.0144 0 9697400 3911600 5785800 1679 2126 633 652 2637 2637 AITFFTEDDKPLLR 14 1 1 Unmodified _AITFFTEDDKPLLR_ 0 0 1 Q9Y2R4;B3KM65;A0A087X121 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.9746 3 555.966401 1664.87737 81684.48 0.62119 0.00034536 -0.069551 -3.8668E-05 0.55163 0.00030669 556.300473452447 561.97390119488 111.74 0.42638 111.74 111.61 112.04 7.6294E-06 117 24 7 0 0 0 0.0001084 1 63868 64.394 52.702 1 1.091 0.91512 0 5150900 2476500 2674500 1680 2126 633 652 2638 2638 AITFVTQYDVELFQR 15 0 1 Unmodified _AITFVTQYDVELFQR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 915.4761 2 915.475251 1828.93595 62620.21 0.532 0.00048703 0.48919 0.00044784 1.0212 0.00093488 915.47598355367 920.481324257014 120.27 0.44542 120.27 120.09 120.53 0 134 30 6 0 0 0 4.3284E-15 2 77479 127.87 116.94 1 0.92742 0.93635 0 9568300 4613600 4954700 1681 313 634 653 2639;2640 2640 AITFVTQYDVELFQR 15 0 1 Unmodified _AITFVTQYDVELFQR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 920.9792 2 915.475251 1828.93595 64008.09 0.87632 0.00080225 0.68056 0.00062304 1.5569 0.0014253 915.976764390417 920.481724457338 119.84 0.4916 119.84 119.58 120.07 0 137 35 7 0 0 0 2.2506E-10 3 79012 119.45 119.45 1 1.0837 1.0718 0 12471000 5450700 7020500 1682 313 634 653 2641;2642;2643 2642 AITFVTQYDVELFQR 15 0 1 Unmodified _AITFVTQYDVELFQR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 920.9824 2 915.475251 1828.93595 63555.35 1.0432 0.00095503 0.077427 7.0883E-05 1.1206 0.0010259 915.976887500303 920.479453324387 132.56 0.46057 132.56 132.36 132.82 0 133 20 9 0 0 0 0.00022552 1 80555 72.29 72.29 1 1.2089 1.0104 0 10361000 4463500 5897000 1683 313 634 653 2644 2644 AITFVTQYDVELFQR 15 0 1 Unmodified _AITFVTQYDVELFQR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 920.9832 2 915.475251 1828.93595 63985.9 1.0406 0.00095265 -0.023039 -2.1091E-05 1.0176 0.00093156 915.475203196337 920.479320117699 132.35 0.49542 132.35 132.12 132.61 0 103 20 8 0 0 0 2.1296E-10 2 79520 119.76 119.76 1 1.2089 1.0059 0 7270500 3440100 3830400 1684 313 634 653 2645;2646 2645 AITGASLADIMAK 13 1 0 Unmodified _AITGASLADIMAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.3466 2 631.344663 1260.67477 75972.05 0.79156 0.00049975 0.31109 0.0001964 1.1027 0.00069615 631.344779420799 635.351900204325 98.822 1.068 98.822 98.251 99.319 0 571 86 10 0 0 0 5.7465E-05 3 60183 96.113 79.693 1 0.49732 0.56093 0 131520000 90240000 41279000 1685 1140 635 654 2647;2648;2649 2647 AITGASLADIMAK 13 1 0 Unmodified _AITGASLADIMAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3526 2 631.344663 1260.67477 76106.81 0.7176 0.00045305 0.28891 0.0001824 1.0065 0.00063545 631.344848975739 635.351961766823 98.022 1.317 98.022 97.56 98.877 0 613 109 10 0 0 0 2.4638E-13 2 61211 127.42 127.42 1 0.46813 0.54656 0 273000000 183440000 89555000 1686 1140 635 654 2650;2651 2651 AITGASLADIMAK 13 1 0 Unmodified _AITGASLADIMAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.3525 2 631.344663 1260.67477 75403.7 0.81101 0.00051203 -0.15403 -9.7245E-05 0.65698 0.00041478 631.34474590055 635.351714503379 111.88 1.4242 111.88 111.43 112.86 -7.6294E-06 530 80 13 0 0 0 0.00013091 3 64756 79.659 79.659 1 1.7484 1.5474 0 310120000 120720000 189410000 1687 1140 635 654 2652;2653;2654 2652 AITGASLADIMAK 13 1 0 Unmodified _AITGASLADIMAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.3526 2 631.344663 1260.67477 75683.61 0.64469 0.00040702 -0.21051 -0.00013291 0.43417 0.00027411 631.344760990509 635.35169509475 111.68 1.2332 111.68 111.38 112.62 0 491 69 13 0 0 0 0.00021605 3 63714 69.721 69.721 1 1.6109 1.3965 0 269710000 102020000 167690000 1688 1140 635 654 2655;2656;2657 2655 AITGASLADIMAK 13 1 0 Oxidation (M) _AITGASLADIM(ox)AK_ AITGASLADIM(1)AK AITGASLADIM(76.33)AK 0 1 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.3417 2 639.34212 1276.66969 75470.38 0.88705 0.00056713 0.12744 8.1476E-05 1.0145 0.0006486 639.342524017129 643.348755423787 98.794 0.8679 98.794 98.292 99.16 0 223 70 5 0 0 0 5.6981E-05 2 60282 85.958 85.958 1 0.44876 0.44787 0 18901000 13292000 5609100 1689 1140 635 655 2658;2659 2658 851 AITGASLADIMAK 13 1 0 Oxidation (M) _AITGASLADIM(ox)AK_ AITGASLADIM(1)AK AITGASLADIM(131.82)AK 0 1 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.3497 2 639.34212 1276.66969 72936.67 0.6512 0.00041634 -0.38184 -0.00024413 0.26936 0.00017221 639.342333562765 643.349008964752 74.239 2.0675 74.239 73.737 75.805 -7.6294E-06 1005 180 11 0 0 0 6.9492E-14 4 44924 131.82 131.82 1 1.2078 1.4271 0 1304800000 602100000 702730000 1690 1140 635 655 2660;2661;2662;2663 2663 851 AITGASLADIMAK 13 1 0 Oxidation (M) _AITGASLADIM(ox)AK_ AITGASLADIM(1)AK AITGASLADIM(79.07)AK 0 1 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.3487 2 639.34212 1276.66969 75977.56 0.65255 0.00041721 0.065856 4.2105E-05 0.71841 0.00045931 639.342346244636 643.348882346691 98.02 0.68108 98.02 97.7 98.381 0 263 59 6 0 0 0 6.2283E-05 2 61206 79.693 79.07 1 0.49656 0.5463 0 42551000 27355000 15197000 1691 1140 635 655 2664;2665 2665 851 AITGASLADIMAK 13 1 0 Oxidation (M) _AITGASLADIM(ox)AK_ AITGASLADIM(1)AK AITGASLADIM(83.4)AK 0 1 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.3496 2 639.34212 1276.66969 72297.42 0.51304 0.00032801 -0.33114 -0.00021171 0.1819 0.0001163 639.342412771601 643.348914297329 86.252 2.4434 86.252 85.666 88.11 0 911 153 11 0 0 0 7.0659E-05 4 47539 83.397 83.397 1 0.89428 0.7827 0 190780000 102120000 88659000 1692 1140 635 655 2666;2667;2668;2669 2668 851 AITGASLADIMAK 13 1 0 Oxidation (M) _AITGASLADIM(ox)AK_ AITGASLADIM(1)AK AITGASLADIM(88.44)AK 0 1 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.3498 2 639.34212 1276.66969 73428.49 0.87347 0.00055844 -0.29451 -0.00018829 0.57896 0.00037015 639.341919643238 643.349068440141 111.88 1.3417 111.88 111.57 112.91 7.6294E-06 374 75 10 0 0 0 7.2569E-05 1 64760 88.441 88.441 1 1.7088 1.4735 0 99591000 36046000 63546000 1693 1140 635 655 2670 2670 851 AITGASLADIMAK 13 1 0 Oxidation (M) _AITGASLADIM(ox)AK_ AITGASLADIM(1)AK AITGASLADIM(91.94)AK 0 1 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.3505 2 639.34212 1276.66969 72172.89 0.59508 0.00038046 -0.40161 -0.00025676 0.19347 0.0001237 639.342238948772 643.348990993454 86.306 2.6727 86.306 85.759 88.431 0 861 157 12 0 0 0 5.2186E-05 4 46834 91.937 91.937 1 0.86935 0.74741 0 158450000 84876000 73578000 1694 1140 635 655 2671;2672;2673;2674 2673 851 AITGASLADIMAK 13 1 0 Oxidation (M) _AITGASLADIM(ox)AK_ AITGASLADIM(1)AK AITGASLADIM(76.33)AK 0 1 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.3492 2 639.34212 1276.66969 73139 0.63371 0.00040516 -0.25111 -0.00016054 0.38261 0.00024462 639.34194500915 643.349163939207 111.69 0.91898 111.69 111.38 112.3 0 313 47 10 0 0 0 5.6981E-05 2 63719 76.332 76.332 1 1.7232 1.4658 0 80024000 29834000 50190000 1695 1140 635 655 2675;2676 2675 851 AITGFDDPFSGK 12 1 0 Unmodified _AITGFDDPFSGK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.3135 2 627.803685 1253.59282 78819.06 0.80975 0.00050836 0.2409 0.00015124 1.0506 0.0006596 627.803385759617 631.810672697899 91.556 0.43316 91.556 91.218 91.651 0 148 33 6 0 0 0 0.0029259 1 55326 57.348 40.572 1 0.72467 0.71194 0 20223000 12017000 8206300 1696 1486 636 656 2677 2677 AITGFDDPFSGK 12 1 0 Unmodified _AITGFDDPFSGK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.8035 2 627.803685 1253.59282 77302.3 1.2772 0.00080185 -0.055706 -3.4972E-05 1.2215 0.00076687 627.803255270879 631.810642559538 90.688 0.45264 90.688 90.374 90.827 7.6294E-06 145 35 6 0 0 0 0.00022091 2 56027 83 58.077 1 0.59836 0.61047 0 31190000 18036000 13154000 1697 1486 636 656 2678;2679 2679 AITGFDDPFSGK 12 1 0 Unmodified _AITGFDDPFSGK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.812 2 627.803685 1253.59282 79361.87 0.46112 0.00028949 0.34242 0.00021498 0.80354 0.00050447 627.803654360196 631.810844238485 104.24 0.48238 104.24 104 104.48 0 95 31 5 0 0 0 0.05825 1 58383 31.286 13.901 1 0.75998 0.62911 0 1637600 892960 744680 1698 1486 636 656 2680 2680 AITHLNNNFMFGQK 14 1 0 Oxidation (M) _AITHLNNNFM(ox)FGQK_ AITHLNNNFM(1)FGQK AITHLNNNFM(43.76)FGQK 0 1 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.6127 3 550.94008 1649.79841 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.754 1 60.754 60.254 61.254 0 0 0 0 0.0048671 1 35586 43.761 33.294 1 1699 865 637 657 2681 2681 679 AITIAGIPQSIIECVK 16 1 0 Unmodified _AITIAGIPQSIIECVK_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;F8VXH9;F8VRH0;Q15366;B4DLC0 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.9854 2 856.984398 1711.95424 NaN NaN NaN -0.65311 -0.0005597 NaN NaN NaN NaN 121.88 0.53307 121.88 121.61 122.14 0 0 0 0 1.8851E-35 1 80646 149.38 101.82 1 NaN NaN 0 26073000 26073000 0 1700 1263;1760 638 658 2682 2682 AITIAGIPQSIIECVK 16 1 0 Unmodified _AITIAGIPQSIIECVK_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;F8VXH9;F8VRH0;Q15366;B4DLC0 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.9921 2 856.984398 1711.95424 65383.73 1.0027 0.00085926 -0.20891 -0.00017904 0.79374 0.00068022 856.98427775852 860.991434798589 134.47 0.16769 134.47 134.39 134.56 0 40 6 9 0 0 0 7.5438E-19 1 82118 137.59 137.59 1 1.6278 1.3318 0 34853000 13250000 21604000 1701 1263;1760 638 658 2683 2683 AITIAGIPQSIIECVK 16 1 0 Unmodified _AITIAGIPQSIIECVK_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;F8VXH9;F8VRH0;Q15366;B4DLC0 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 860.9915 2 856.984398 1711.95424 65460.28 0.73964 0.00063386 -0.60294 -0.00051671 0.13671 0.00011716 856.984058258618 860.991047049129 134.38 0.23436 134.38 134.24 134.47 0 43 9 10 0 0 0 1.0252E-05 1 81166 86.911 86.911 1 1.4539 1.2147 0 43372000 18056000 25315000 1702 1263;1760 638 658 2684 2684 AITIAGVPQSVTECVK 16 1 0 Unmodified _AITIAGVPQSVTECVK_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 840.9576 2 836.950555 1671.88656 67266.15 0.738 0.00061767 -0.56317 -0.00047134 0.17483 0.00014632 836.950118319694 840.95710073023 95.039 1.1965 95.039 94.336 95.533 0 468 100 9 0 0 0 7.9851E-18 1 57807 134.18 134.18 1 1.8849 2.1314 0 103950000 37407000 66544000 1703 1759 639 659 2685 2685 AITIAGVPQSVTECVK 16 1 0 Unmodified _AITIAGVPQSVTECVK_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.9584 2 836.950555 1671.88656 67238.46 0.93687 0.00078411 -0.7893 -0.0006606 0.14757 0.00012351 836.949858327436 840.956949331151 94.308 1.2562 94.308 93.48 94.736 0 552 107 8 0 0 0 4.6811E-13 2 58690 124.38 124.38 1 1.8455 2.0719 0 115890000 40662000 75224000 1704 1759 639 659 2686;2687 2686 AITIAGVPQSVTECVK 16 1 0 Unmodified _AITIAGVPQSVTECVK_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 836.951 2 836.950555 1671.88656 66355.97 0.66824 0.00055928 0.48194 0.00040336 1.1502 0.00096264 836.950830420631 840.957980076189 108.59 0.72661 108.59 108.15 108.88 0 175 35 9 0 0 0 0.00019577 2 62381 60.08 60.08 1 1.2401 0.98375 0 18852000 8129700 10722000 1705 1759 639 659 2688;2689 2689 AITIAGVPQSVTECVK 16 1 0 Unmodified _AITIAGVPQSVTECVK_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 836.9509 2 836.950555 1671.88656 66803.27 0.65032 0.00054429 0.18802 0.00015736 0.83834 0.00070165 837.452642109968 840.957793359542 108.52 0.52107 108.52 108.29 108.81 0 160 26 9 0 0 0 0.00017097 2 61393 61.235 61.235 1 1.2502 1.0042 0 15404000 6614400 8790100 1706 1759 639 659 2690;2691 2691 AITYQIAK 8 1 0 Unmodified _AITYQIAK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2732 2 454.26601 906.517468 91069.3 0.3156 0.00014337 0.10555 4.7947E-05 0.42115 0.00019131 454.26596194595 458.273226541599 44.802 0.66993 44.802 44.482 45.152 0 244 60 5 0 0 0 0.024726 1 24051 55.676 21.673 1 0.87846 0.94713 0 37608000 20218000 17390000 1707 2063 640 660 2692 2692 AITYQIAK 8 1 0 Unmodified _AITYQIAK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.2658 2 454.26601 906.517468 90932.13 0.48971 0.00022246 0.12279 5.5779E-05 0.6125 0.00027824 454.265962208763 458.273113392687 44.074 0.57859 44.074 43.735 44.313 0 196 50 5 0 0 0 0.0075008 2 24005 82.671 63.184 1 0.94635 1.0603 0 80957000 40430000 40527000 1708 2063 640 660 2693;2694 2693 AIVAESLNNTSIK 13 1 0 Unmodified _AIVAESLNNTSIK_ 0 0 0 P35251;H0Y8U4 P35251 P35251 RFC1 Replication factor C subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.3798 2 680.377549 1358.74054 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.803 1 65.803 65.303 66.303 0 0 0 0 3.5158E-16 1 37923 121.6 63.745 1 1709 1542 641 661 2695 2695 AIVAESLNNTSIK 13 1 0 Unmodified _AIVAESLNNTSIK_ 0 0 0 P35251;H0Y8U4 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.3643 2 680.377549 1358.74054 78286.87 0.68766 0.00046787 0.47977 0.00032642 1.1674 0.00079429 680.880185968852 684.384372687171 65.98 0.66502 65.98 65.553 66.218 0 150 61 4 0 0 0 4.857E-06 1 37973 99.568 99.568 1 0.88849 0.90679 0 13192000 7063000 6129200 1710 1542 641 661 2696 2696 AIVAESLNNTSIK 13 1 0 Unmodified _AIVAESLNNTSIK_ 0 0 0 P35251;H0Y8U4 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3843 2 680.377549 1358.74054 77229.57 0.35926 0.00024443 0.072287 4.9182E-05 0.43155 0.00029362 680.377477119744 684.384561138117 64.922 0.65584 64.922 64.571 65.227 0 191 54 6 0 0 0 0.0059651 1 38289 46.73 46.73 1 0.90935 0.96026 0 23669000 14106000 9562800 1711 1542 641 661 2697 2697 AIVAESLNNTSIK 13 1 0 Unmodified _AIVAESLNNTSIK_ 0 0 0 P35251;H0Y8U4 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.3784 2 680.377549 1358.74054 75353.72 0.57094 0.00038846 0.35204 0.00023952 0.92298 0.00062798 680.377280696658 684.38514949324 75.917 0.60143 75.917 75.588 76.189 0 153 41 5 0 0 0 0.00019093 1 40440 70.942 50.071 1 1.001 0.8007 0 7093700 3482900 3610800 1712 1542 641 661 2698 2698 AIVAESLNNTSIK 13 1 0 Unmodified _AIVAESLNNTSIK_ 0 0 0 P35251;H0Y8U4 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.3779 2 680.377549 1358.74054 75398.78 0.46933 0.00031932 -0.031416 -2.1374E-05 0.43792 0.00029795 680.37725556648 684.384675798923 76.276 0.64854 76.276 75.884 76.532 0 135 43 6 0 0 0 5.6581E-09 2 39846 119.53 85.142 1 0.69156 0.56342 0 6708300 3901100 2807100 1713 1542 641 661 2699;2700 2700 AIVAIENPADVSVISSR 17 0 1 Unmodified _AIVAIENPADVSVISSR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 875.9835 2 870.978158 1739.94176 66031.52 0.68973 0.00060074 0.5097 0.00044394 1.1994 0.0010447 870.978337934257 875.982751240187 105.18 0.91653 105.18 104.83 105.75 0 484 72 10 0 0 0 1.5522E-81 2 65060 205.72 184.49 1 1.6693 1.9769 0 407450000 148190000 259260000 1714 119 642 662 2701;2702 2702 AIVAIENPADVSVISSR 17 0 1 Unmodified _AIVAIENPADVSVISSR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.9791 2 870.978158 1739.94176 64908.82 0.7822 0.00068128 0.40452 0.00035233 1.1867 0.0010336 870.97830588437 875.982672696152 104.54 0.90536 104.54 104.19 105.1 7.6294E-06 457 72 9 0 0 0 2.0162E-18 2 66100 134.99 132.59 1 1.7077 1.987 0 410310000 151170000 259130000 1715 119 642 662 2703;2704 2703 AIVAIENPADVSVISSR 17 0 1 Unmodified _AIVAIENPADVSVISSR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 875.9832 2 870.978158 1739.94176 65274.07 0.30197 0.00026301 0.71054 0.00061887 1.0125 0.00088187 870.978856810571 875.982921647843 116.58 0.5409 116.58 116.36 116.9 0 146 20 10 0 0 0 5.3557E-18 2 68561 130.1 115.22 1 1.5872 1.3606 0 41521000 15538000 25983000 1716 119 642 662 2705;2706 2706 AIVAIENPADVSVISSR 17 0 1 Unmodified _AIVAIENPADVSVISSR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 875.9834 2 870.978158 1739.94176 65939.82 0.52057 0.0004534 0.53244 0.00046374 1.053 0.00091714 870.97864224279 875.982789634987 116.46 0.53285 116.46 116.21 116.74 0 159 23 10 0 0 0 2.3136E-25 2 67523 145.6 130.21 1 1.5282 1.3331 0 45939000 17992000 27947000 1717 119 642 662 2707;2708 2708 AIVEFLSNLAR 11 0 1 Unmodified _AIVEFLSNLAR_ 0 0 0 B2R7X3;Q13112 B2R7X3 B2R7X3 CHAF1B Chromatin assembly factor 1 subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8579 2 616.853512 1231.69247 81117.29 0.71963 0.00044391 -0.32226 -0.00019879 0.39737 0.00024512 616.853344284355 621.85767309025 116.65 0.45804 116.65 116.42 116.87 -7.6294E-06 88 31 4 0 0 0 0.00092259 1 74426 71.451 39.131 1 0.98457 1.0181 0 6101700 3017700 3084000 1718 856 643 663 2709 2709 AIVEFLSNLAR 11 0 1 Unmodified _AIVEFLSNLAR_ 0 0 0 B2R7X3;Q13112 B2R7X3 B2R7X3 CHAF1B Chromatin assembly factor 1 subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8546 2 616.853512 1231.69247 80089.68 0.42526 0.00026232 0.072922 4.4982E-05 0.49818 0.0003073 616.853661469622 621.857946806883 116.03 0.39204 116.03 115.8 116.19 7.6294E-06 91 25 4 0 0 0 0.0019892 2 75786 63.283 43.497 1 1.0532 1.0635 0 5603100 2815900 2787100 1719 856 643 663 2710;2711 2711 AIVEFLSNLAR 11 0 1 Unmodified _AIVEFLSNLAR_ 0 0 0 B2R7X3;Q13112 B2R7X3 B2R7X3 CHAF1B Chromatin assembly factor 1 subunit B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.8527 2 616.853512 1231.69247 82193.45 1.0327 0.00063699 -0.5199 -0.0003207 0.51275 0.00031629 616.852788027181 621.857386566999 128.33 0.36566 128.33 128.16 128.53 0 41 15 5 0 0 0 0.020958 1 77518 43.512 23.183 1 0.75717 0.66955 0 1076600 621340 455300 1720 856 643 663 2712 2712 AIVFVVDSAAFQR 13 0 1 Unmodified _AIVFVVDSAAFQR_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.8965 2 711.890626 1421.7667 74411.34 0.72752 0.00051791 0.35449 0.00025236 1.082 0.00077027 712.392589276347 716.895181007063 109.93 0.43835 109.93 109.68 110.12 0 123 30 6 0 0 0 7.4727E-09 1 68829 117.67 91.159 1 1.0357 1.0486 0 15244000 7806700 7436800 1721 1794 644 664 2713 2713 AIVFVVDSAAFQR 13 0 1 Unmodified _AIVFVVDSAAFQR_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.8915 2 711.890626 1421.7667 NaN NaN NaN 0.15529 0.00011055 NaN NaN NaN NaN 109.31 0.41451 109.31 109.07 109.48 -7.6294E-06 0 0 0 7.8143E-14 1 70165 120.68 80.638 1 NaN NaN 0 7824500 7824500 0 1722 1794 644 664 2714 2714 AIVHAVGQELQVTGPFNLQLIAK 23 1 0 Unmodified _AIVHAVGQELQVTGPFNLQLIAK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.8014 3 816.13207 2445.37438 67591.23 0.67445 0.00055044 0.711 0.00058027 1.3855 0.0011307 816.467329370545 819.1380627042 131.27 0.27008 131.27 131.11 131.38 0 64 12 8 0 0 0 0.028673 1 79651 15.546 15.136 1 0.69178 0.53957 0 3769400 1930600 1838800 1723 1259 645 665 2715 2715 AIVICPTDEDLK 12 1 0 Unmodified _AIVICPTDEDLK_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0;B3KM60 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3601 2 687.352685 1372.69082 74660.58 0.65843 0.00045257 -0.15055 -0.00010348 0.50788 0.00034909 687.3524698849 691.360239723204 78.748 0.47643 78.748 78.511 78.988 7.6294E-06 189 41 7 0 0 0 0.00034764 1 46626 72.325 72.325 1 0.96589 0.95935 0 19121000 9284200 9836500 1724 49 646 666 2716 2716 AIVICPTDEDLK 12 1 0 Unmodified _AIVICPTDEDLK_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0;B3KM60 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.352 2 687.352685 1372.69082 71161.46 0.69645 0.00047871 -0.30731 -0.00021123 0.38914 0.00026747 687.352144361138 691.360157484445 77.784 0.55797 77.784 77.554 78.112 0 181 48 6 0 0 0 0.00022519 4 47052 83.869 83.869 1 0.92826 1.0056 0 22443000 11333000 11110000 1725 49 646 666 2717;2718;2719;2720 2719 AIVICPTDEDLK 12 1 0 Unmodified _AIVICPTDEDLK_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0;B3KM60 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.3596 2 687.352685 1372.69082 71558.53 0.41527 0.00028544 -1.2658 -0.00087004 -0.85051 -0.0005846 687.352497717573 691.359960689622 90.117 0.49 90.117 89.909 90.399 0 154 36 7 0 0 0 0.0028278 2 49845 57.598 37.812 1 0.9793 0.77619 0 4218400 2079600 2138700 1726 49 646 666 2721;2722 2721 AIVICPTDEDLK 12 1 0 Unmodified _AIVICPTDEDLK_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0;B3KM60 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 691.361 2 687.352685 1372.69082 72565.84 0.36057 0.00024784 -0.62975 -0.00043286 -0.26919 -0.00018503 687.352434533171 691.359829658951 90.051 0.44978 90.051 89.844 90.294 7.6294E-06 134 30 6 0 0 0 0.0032341 3 48980 56.563 36.234 1 0.86786 0.67728 0 3453200 1812000 1641200 1727 49 646 666 2723;2724;2725 2723 AIVLAAIFR 9 0 1 Unmodified _AIVLAAIFR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.3176 2 487.313295 972.612037 NaN NaN NaN -0.45691 -0.00022266 NaN NaN NaN NaN 115.75 0.59109 115.75 115.44 116.03 -7.6294E-06 0 0 0 0.0080845 1 73761 68.915 45.896 1 NaN NaN 0 2964200 0 2964200 1728 122 647 667 2726 2726 AIVLAAIFR 9 0 1 Unmodified _AIVLAAIFR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.3177 2 487.313295 972.612037 88385.65 0.27891 0.00013592 -0.2374 -0.00011569 0.041507 2.0227E-05 487.312845554978 492.317386011543 127.45 0.49599 127.45 127.26 127.76 -7.6294E-06 65 19 4 0 0 0 0.049751 1 76761 38.133 27.26 1 1.1235 0.98654 0 1785300 722430 1062900 1729 122 647 667 2727 2727 AIVLAAIFR 9 0 1 Unmodified _AIVLAAIFR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.3175 2 487.313295 972.612037 NaN NaN NaN -0.23854 -0.00011624 NaN NaN NaN NaN 127.13 0.42799 127.13 126.98 127.4 0 0 0 0 0.054061 1 75678 45.718 33.813 1 NaN NaN 0 827210 0 827210 1730 122 647 667 2728 2728 AIVPQALSGIIK 12 1 0 Unmodified _AIVPQALSGIIK_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.382 2 605.381906 1208.74926 80062.23 0.9333 0.00056501 -0.14831 -8.9784E-05 0.78499 0.00047522 605.381653375443 609.388865938518 110.04 0.39466 110.04 109.82 110.22 0 100 23 6 0 0 0 0.00019951 1 70710 78.655 65.536 1 0.52672 0.54719 0 33607000 23805000 9802200 1731 1323 648 668 2729 2729 AIVPQALSGIIK 12 1 0 Unmodified _AIVPQALSGIIK_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.3825 2 605.381906 1208.74926 79870.84 0.75459 0.00045681 0.22368 0.00013541 0.97827 0.00059223 605.38183276621 609.389076627664 122.12 0.40745 122.12 121.93 122.33 0 83 18 6 0 0 0 0.019724 1 72883 39.873 34.232 1 0.55887 0.437 0 16300000 10605000 5695600 1732 1323 648 668 2730 2730 AIVSSGTLGDR 11 0 1 Unmodified _AIVSSGTLGDR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.2948 2 538.290745 1074.56694 84096.12 0.78081 0.0004203 -0.17742 -9.5503E-05 0.60339 0.0003248 538.291023684842 543.294592701699 40.097 0.52674 40.097 39.847 40.374 0 170 45 5 0 0 0 0.00040176 2 21295 81.338 49.689 1 0.88817 1.0234 0 73106000 35442000 37663000 1733 836;1683 649 669 2731;2732 2731 AIYAALSGNLK 11 1 0 Unmodified _AIYAALSGNLK_ 0 0 0 P57740;B3KMK0;H0YG15 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8284 2 560.821681 1119.62881 83943.76 0.47207 0.00026475 0.013385 7.5064E-06 0.48546 0.00027226 560.821544318661 564.82869410109 76.815 0.50321 76.815 76.567 77.07 0 134 43 5 0 0 0 3.837E-05 1 45292 99.802 74.879 1 1.4455 1.4285 0 9381900 3091200 6290700 1734 1621 650 670 2733 2733 AIYAALSGNLK 11 1 0 Unmodified _AIYAALSGNLK_ 0 0 0 P57740;B3KMK0;H0YG15 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8289 2 560.821681 1119.62881 83964.2 0.58422 0.00032764 -0.13733 -7.702E-05 0.44688 0.00025062 560.821486496079 564.8287488329 75.721 0.47639 75.721 75.481 75.957 0 143 42 5 0 0 0 0.00032567 1 45565 87.308 62.385 1 1.6962 1.6932 0 14583000 6301600 8281300 1735 1621 650 670 2734 2734 AIYAALSGNLK 11 1 0 Unmodified _AIYAALSGNLK_ 0 0 0 P57740;B3KMK0;H0YG15 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.8213 2 560.821681 1119.62881 84684.77 0.59096 0.00033142 0.047552 2.6668E-05 0.63851 0.00035809 560.821304756709 564.828727211421 87.879 0.50554 87.879 87.589 88.094 0 101 31 5 0 0 0 0.013755 1 48408 47.187 29.367 1 1.4416 1.2028 0 1298500 513160 785340 1736 1621 650 670 2735 2735 AIYAALSGNLK 11 1 0 Unmodified _AIYAALSGNLK_ 0 0 0 P57740;B3KMK0;H0YG15 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.8282 2 560.821681 1119.62881 NaN NaN NaN 0.19859 0.00011137 NaN NaN NaN NaN 87.872 0.55162 87.872 87.631 88.183 7.6294E-06 0 0 0 0.05214 1 47529 43.635 22.335 1 NaN NaN 0 807100 0 807100 1737 1621 650 670 2736 2736 AIYAYALQVFPSK 13 1 0 Unmodified _AIYAYALQVFPSK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.9105 2 735.903202 1469.79185 71619.59 0.9461 0.00069624 0.098728 7.2655E-05 1.0448 0.00076889 735.903615255291 739.909811457703 112.2 0.47257 112.2 112 112.47 0 118 32 5 0 0 0 0.00013611 1 70751 99.283 99.283 1 0.44807 0.46315 0 12747000 8437800 4308800 1738 1418 651 671 2737 2737 AIYAYALQVFPSK 13 1 0 Unmodified _AIYAYALQVFPSK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.9117 2 735.903202 1469.79185 73958.23 0.95428 0.00070226 0.19844 0.00014603 1.1527 0.00084829 735.903645309117 739.910077052093 111.61 0.38595 111.61 111.42 111.8 0 117 24 6 0 0 0 0.00013014 1 72021 96.015 96.015 1 0.40397 0.4036 0 14135000 9656000 4479200 1739 1418 651 671 2738 2738 AIYAYALQVFPSK 13 1 0 Unmodified _AIYAYALQVFPSK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.9108 2 735.903202 1469.79185 72524.03 0.91007 0.00066972 -0.73989 -0.00054448 0.17018 0.00012524 736.404111838976 739.910139545162 123.31 0.37694 123.31 123.11 123.48 0 61 15 7 0 0 0 0.0036903 1 73706 62.466 62.466 1 1.2576 1.0083 0 2868100 1392100 1476000 1740 1418 651 671 2739 2739 AIYAYALQVFPSK 13 1 0 Unmodified _AIYAYALQVFPSK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.4123 2 735.903202 1469.79185 73298.72 0.94202 0.00069324 -0.89341 -0.00065746 0.04861 3.5772E-05 735.901533404635 740.411276813552 123.12 0.36967 123.12 122.95 123.32 0 72 17 7 0 0 0 0.011092 1 72641 52.391 52.391 1 1.131 0.90127 0 3096300 1507300 1589000 1741 1418 651 671 2740 2740 AIYDTPCIQAESEK 14 1 0 Unmodified _AIYDTPCIQAESEK_ 0 0 0 A0A0S2Z489;O00232;A0A0S2Z476 A0A0S2Z489 A0A0S2Z489 PSMD12 26S proteasome non-ATPase regulatory subunit 12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.8811 2 812.879795 1623.74504 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.452 1 64.452 63.952 64.952 0 0 0 0 0.0054003 1 37944 55.401 39.771 1 1742 558 652 672 2741 2741 AKEEEGVPDEEGWVK 15 2 0 Unmodified _AKEEEGVPDEEGWVK_ 0 0 1 Q9Y3A4;Q9NSQ0 Q9Y3A4 Q9Y3A4 RRP7A;RRP7BP Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.9373 3 567.937058 1700.78935 79791.41 0.46874 0.00026621 0.21612 0.00012274 0.68485 0.00038895 568.271621352882 573.280192624403 52.539 0.50762 52.539 52.334 52.842 -3.8147E-06 188 36 8 0 0 0 0.0011745 1 29200 35.329 34.078 1 0.89508 1.0568 0 42342000 24113000 18229000 1743 2133 653 673 2742 2742 AKEEEGVPDEEGWVK 15 2 0 Unmodified _AKEEEGVPDEEGWVK_ 0 0 1 Q9Y3A4;Q9NSQ0 Q9Y3A4 Q9Y3A4 RRP7A;RRP7BP Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 851.4029 2 851.401949 1700.78935 66705.02 0.57004 0.00048533 0.1369 0.00011656 0.70694 0.00060189 851.402695574183 859.415815708118 52.538 0.32202 52.538 52.385 52.707 0 74 23 6 0 0 0 8.8403E-10 1 29204 121.04 115.94 1 0.76669 0.91555 0 19300000 9978600 9321700 1744 2133 653 673 2743 2743 AKEEEGVPDEEGWVK 15 2 0 Unmodified _AKEEEGVPDEEGWVK_ 0 0 1 Q9Y3A4;Q9NSQ0 Q9Y3A4 Q9Y3A4 RRP7A;RRP7BP Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.27 3 567.937058 1700.78935 79943.02 0.65209 0.00037034 0.043052 2.4451E-05 0.69514 0.00039479 567.936960672192 573.280293934234 51.193 0.57299 51.193 50.97 51.543 0 199 44 7 0 0 0 0.015871 1 29135 16.173 16.173 1 0.89117 1.0222 0 21314000 11712000 9601800 1745 2133 653 673 2744 2744 AKEEEGVPDEEGWVK 15 2 0 Unmodified _AKEEEGVPDEEGWVK_ 0 0 1 Q9Y3A4;Q9NSQ0 Q9Y3A4 Q9Y3A4 RRP7A;RRP7BP Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.28 3 567.937058 1700.78935 80167.05 0.43932 0.0002495 -0.024777 -1.4072E-05 0.41454 0.00023543 567.936815847414 573.279851566265 61.76 0.56697 61.76 61.518 62.085 0 271 45 8 0 0 0 0.010951 1 31608 20.939 20.939 1 1.471 1.2628 0 7498900 2922500 4576400 1746 2133 653 673 2745 2745 AKEEEGVPDEEGWVK 15 2 0 Unmodified _AKEEEGVPDEEGWVK_ 0 0 1 Q9Y3A4;Q9NSQ0 Q9Y3A4 Q9Y3A4 RRP7A;RRP7BP Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 859.4157 2 851.401949 1700.78935 65252.1 0.41217 0.00035093 0.034393 2.9283E-05 0.44657 0.00038021 851.401853485179 859.415795787153 62.325 0.43184 62.325 62.105 62.536 0 164 34 6 0 0 0 0.021097 1 31292 40.725 40.725 1 1.4323 1.235 0 3147100 1224700 1922300 1747 2133 653 673 2746 2746 AKQEELEAALQR 12 1 1 Unmodified _AKQEELEAALQR_ 0 0 1 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 468.5917 3 462.584291 1384.73104 89568.88 0.10832 5.0106E-05 -0.42859 -0.00019826 -0.32028 -0.00014815 462.584075364049 468.591619163099 48.659 0.63942 48.659 48.395 49.034 0 191 50 6 0 0 0 0.0091235 1 23672 29.071 18.95 1 1.1153 0.91549 0 4945900 2287300 2658600 + 1748 1171;1158 654 674 2747 2747 AKQEELEAALQR 12 1 1 Unmodified _AKQEELEAALQR_ 0 0 1 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.5915 3 462.584291 1384.73104 88997.98 -0.10922 -5.0525E-05 -0.17394 -8.0464E-05 -0.28317 -0.00013099 462.584246490011 468.591518500918 48.885 1.0043 48.885 48.213 49.218 0 228 82 6 0 0 0 0.039277 1 23181 18.73 14.935 1 0.90934 0.76548 0 4253400 2468600 1784800 + 1749 1171;1158 654 674 2748 2748 AKQEELEAALQR 12 1 1 Unmodified _AKQEELEAALQR_ 0 0 1 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.3722 2 693.372798 1384.73104 73137.69 0.22777 0.00015793 0.11106 7.7006E-05 0.33883 0.00023493 693.372737100274 702.384210925996 48.859 0.48555 48.859 48.614 49.1 0 180 36 6 0 0 0 0.020191 1 23189 58.699 56.544 1 0.99339 0.83259 0 6113500 3099500 3014000 + 1750 1171;1158 654 674 2749 2749 AKVDEFPLCGHMVSDEYEQLSSEALEAAR 29 1 1 Unmodified _AKVDEFPLCGHMVSDEYEQLSSEALEAAR_ 0 0 1 X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 821.383 4 821.132687 3280.50164 66092.55 0.92567 0.0007601 -0.77475 -0.00063617 0.15093 0.00012393 821.382721801235 825.888599317983 124.26 0.70536 124.26 124 124.7 7.6294E-06 212 29 14 0 0 0 0.044535 1 74505 9.2214 9.2214 1 1.0071 0.88591 0 34249000 14484000 19765000 1751 1524 655 675 2750 2750 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;Q02539;A1L407;P22492;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1A;HIST1H1T;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.1;Histone H1t;Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.2941 2 554.287671 1106.56079 83205.84 0.57271 0.00031745 -1.2429 -0.00068894 -0.67022 -0.0003715 554.28690771258 558.294174911323 40.823 0.45333 40.823 40.675 41.128 0 159 38 6 0 0 0 0.00029949 2 21393 88.495 65.782 1 1.0941 1.0746 0 20272000 10798000 9474700 1752 656;1490 656 676 2751;2752 2751 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;Q02539;A1L407;P22492;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1A;HIST1H1T;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.1;Histone H1t;Histone H1.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.2878 2 554.287671 1106.56079 NaN NaN NaN 0.5679 0.00031478 NaN NaN NaN NaN 44.688 1.1471 44.688 44.312 45.459 3.8147E-06 0 0 0 2.8008E-05 2 24357 102.06 67.889 1 NaN NaN 0 6866500000 6866500000 0 1753 656;1490 656 676 2753;2754 2754 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;Q02539;A1L407;P22492;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1A;HIST1H1T;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.1;Histone H1t;Histone H1.2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.2945 2 554.287671 1106.56079 NaN NaN NaN -0.26231 -0.0001454 NaN NaN NaN NaN 48.228 0.33817 48.228 48.098 48.436 0 0 0 0 0.0029048 1 26240 70.1 34.589 1 NaN NaN 0 6614500 0 6614500 1754 656;1490 656 676 2755 2755 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;Q02539;A1L407;P22492;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1A;HIST1H1T;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.1;Histone H1t;Histone H1.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.2886 2 554.287671 1106.56079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.248 1 47.248 46.748 47.748 0 0 0 0 0.00036373 1 25598 77.662 38.641 1 1755 656;1490 656 676 2756 2756 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;Q02539;A1L407;P22492;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1A;HIST1H1T;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.1;Histone H1t;Histone H1.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.2879 2 554.287671 1106.56079 NaN NaN NaN 0.0066403 3.6806E-06 NaN NaN NaN NaN 43.95 1.6566 43.95 43.517 45.173 0 0 0 0 2.8008E-05 2 23759 102.06 67.973 1 NaN NaN 0 6616600000 6616600000 0 1756 656;1490 656 676 2757;2758 2757 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;Q02539;A1L407;P22492;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1A;HIST1H1T;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.1;Histone H1t;Histone H1.2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.6299 2 554.287671 1106.56079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.052 1 42.052 41.552 42.552 0 0 0 0 0.035604 1 22646 46.462 16.208 1 1757 656;1490 656 676 2759 2759 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;Q02539;A1L407;P22492;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1A;HIST1H1T;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.1;Histone H1t;Histone H1.2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.296 2 554.287671 1106.56079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.344 1 46.344 45.844 46.844 0 0 0 0 0.00084361 1 25574 70.1 32.909 1 1758 656;1490 656 676 2760 2760 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;Q02539;A1L407;P22492;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1A;HIST1H1T;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.1;Histone H1t;Histone H1.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.2871 2 554.287671 1106.56079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.498 1 46.498 45.998 46.998 0 0 0 0 0.0097572 1 25691 59.426 17.978 1 1759 656;1490 656 676 2761 2761 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;Q02539;A1L407;P22492;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1A;HIST1H1T;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.1;Histone H1t;Histone H1.2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.2942 2 554.287671 1106.56079 NaN NaN NaN -0.42502 -0.00023558 NaN NaN NaN NaN 54.196 1.9938 54.196 53.868 55.861 -3.8147E-06 0 0 0 0.01936 2 26523 53.327 23.073 1 NaN NaN 0 2942000 0 2942000 1760 656;1490 656 676 2762;2763 2762 ALAAFLK 7 1 0 Unmodified _ALAAFLK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 371.2413 2 367.233982 732.453411 99175.21 0.016081 5.9056E-06 0.42706 0.00015683 0.44314 0.00016273 367.23405560893 371.241084769998 73.291 0.355 73.291 73.086 73.441 0 143 32 6 0 0 0 0.02838 2 42923 72.021 13.36 1 1.1323 1.2932 0 180260000 86259000 94001000 1761 811 657 677 2764;2765 2764 ALAAFLK 7 1 0 Unmodified _ALAAFLK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 367.234 2 367.233982 732.453411 98137.76 0.66674 0.00024485 -0.14574 -5.3519E-05 0.521 0.00019133 367.233836455852 371.24088364908 71.83 0.31557 71.83 71.683 71.999 0 136 27 6 0 0 0 0.026742 2 43067 77.72 19.168 1 1.1589 1.3459 0 227220000 103300000 123920000 1762 811 657 677 2766;2767 2767 ALAAFLK 7 1 0 Unmodified _ALAAFLK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 367.2342 2 367.233982 732.453411 99622.54 0.029763 1.093E-05 0.10318 3.7892E-05 0.13294 4.8822E-05 367.233992557393 371.241043407278 83.7 0.38954 83.7 83.537 83.926 0 101 30 4 0 0 0 0.060773 1 45635 50.12 13.533 1 1.1084 0.88928 0 7596100 3393400 4202700 1763 811 657 677 2768 2768 ALAAFLK 7 1 0 Unmodified _ALAAFLK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 367.2339 2 367.233982 732.453411 99394.43 0.22147 8.1333E-05 -0.054724 -2.0096E-05 0.16675 6.1237E-05 367.233916868181 371.240921592943 83.79 0.37067 83.79 83.577 83.948 0 82 25 4 0 0 0 0.052963 1 44880 53.71 7.3586 1 1.1758 0.95902 0 6446300 3102000 3344300 1764 811 657 677 2769 2769 ALAAGGYDVEK 11 1 0 Unmodified _ALAAGGYDVEK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.2799 2 547.279846 1092.54514 NaN NaN NaN 0.072345 3.9593E-05 NaN NaN NaN NaN 40.689 1.7309 40.689 40.345 42.076 0 0 0 0 0.00094347 2 21164 86.898 46.042 1 NaN NaN 0 5233200000 5233200000 0 1765 1489 658 678 2770;2771 2770 ALAAGGYDVEK 11 1 0 Unmodified _ALAAGGYDVEK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.2802 2 547.279846 1092.54514 NaN NaN NaN 0.11313 6.1915E-05 NaN NaN NaN NaN 39.649 1.2917 39.649 39.202 40.494 0 0 0 0 2.8008E-05 2 20850 102.06 57.712 1 NaN NaN 0 6133200000 6133200000 0 1766 1489 658 678 2772;2773 2772 ALAAGGYDVEK 11 1 0 Unmodified _ALAAGGYDVEK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3005 2 547.279846 1092.54514 81511.45 0.52757 0.00028873 0.33033 0.00018078 0.8579 0.00046951 547.279928205219 551.286960077075 40.549 0.50005 40.549 40.494 40.994 0 165 36 6 0 0 0 0.024429 1 21849 72.643 62.412 1 0.57634 0.64669 0 77156000 47831000 29325000 1767 1489 658 678 2774 2774 ALAAGGYDVEK 11 1 0 Unmodified _ALAAGGYDVEK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.2797 2 547.279846 1092.54514 NaN NaN NaN -0.23897 -0.00013078 NaN NaN NaN NaN 46.822 2.7847 46.822 46.294 49.079 0 0 0 0 0.0097635 3 22349 59.426 29.953 1 NaN NaN 0 659640000 659640000 0 1768 1489 658 678 2775;2776;2777 2775 ALAAGGYDVEK 11 1 0 Unmodified _ALAAGGYDVEK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.2806 2 547.279846 1092.54514 NaN NaN NaN -0.0083847 -4.5888E-06 NaN NaN NaN NaN 47.18 3.7481 47.18 46.417 50.165 3.8147E-06 0 0 0 0.0097635 3 22421 59.426 29.172 1 NaN NaN 0 563770000 563770000 0 1769 1489 658 678 2778;2779;2780 2779 ALADDDFLTVTGK 13 1 0 Unmodified _ALADDDFLTVTGK_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;A4FS09 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.3486 2 683.348457 1364.68236 74133.59 0.6338 0.00043311 0.68552 0.00046845 1.3193 0.00090155 683.850360230953 687.857368583681 106.86 0.5649 106.86 106.58 107.15 0 130 33 6 0 0 0 0.012116 1 60253 39.785 36.933 1 0.84982 0.67167 0 3937300 2010000 1927300 1770 235 659 679 2781 2781 ALADENEFVR 10 0 1 Unmodified _ALADENEFVR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.2922 2 582.288202 1162.56185 79434.21 0.57342 0.0003339 0.3931 0.0002289 0.96652 0.00056279 582.288128401894 587.292607957252 57.945 0.74094 57.945 57.509 58.25 0 156 58 4 0 0 0 0.0032667 1 32662 65.305 33.371 1 1.6845 1.7385 0 13986000 4943600 9042000 1771 1205 660 680 2782 2782 ALADHSMAQTPR 12 0 1 Oxidation (M) _ALADHSM(ox)AQTPR_ ALADHSM(1)AQTPR ALADHSM(43.28)AQTPR 0 1 0 Q6IAX9;P08240;A0A024R3M0 Q6IAX9 Q6IAX9 SRPR Signal recognition particle receptor subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.3173 2 657.316968 1312.61938 75533.84 1.0466 0.00068797 0.48009 0.00031557 1.5267 0.0010035 657.317059196047 662.32186942851 16.955 0.21915 16.955 16.913 17.132 0 27 7 5 0 0 0 0.0072101 1 4009 43.282 43.282 1 1.0432 1.0845 0 4510000 2052400 2457700 1772 1455 661 681 2783 2783 1164 ALADHSMAQTPR 12 0 1 Oxidation (M) _ALADHSM(ox)AQTPR_ ALADHSM(1)AQTPR ALADHSM(56.95)AQTPR 0 1 0 Q6IAX9;P08240;A0A024R3M0 Q6IAX9 Q6IAX9 SRPR Signal recognition particle receptor subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.8841 3 438.547071 1312.61938 91297.33 0.5844 0.00025629 0.0092398 4.0521E-06 0.59364 0.00026034 438.546947038867 441.883107347704 17.018 0.42066 17.018 16.863 17.284 0 50 13 6 0 0 0 0.00078069 1 4034 56.951 38.206 1 1.1683 1.1876 0 5330500 2609100 2721400 1773 1455 661 681 2784 2784 1164 ALAEPCAVLPTVCAPYIPPQR 21 0 1 Unmodified _ALAEPCAVLPTVCAPYIPPQR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;Q59G93 A0A024R4W4 A0A024R4W4 BRD1 Bromodomain-containing protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1167.6022 2 1162.1005 2322.18644 NaN NaN NaN -0.50805 -0.0005904 NaN NaN NaN NaN 127.33 0.67475 127.33 127.12 127.79 7.6294E-06 0 0 0 0.019855 1 75758 31.526 24.644 1 NaN NaN 0 2252700 0 2252700 1774 162 662 682 2785 2785 ALAEVDVISLEQGK 14 1 0 Unmodified _ALAEVDVISLEQGK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.4139 2 736.403763 1470.79297 72177.85 0.96776 0.00071266 -0.2085 -0.00015354 0.75926 0.00055912 736.403223887663 740.410590230437 98.675 0.72047 98.675 98.372 99.093 -7.6294E-06 393 58 9 0 0 0 1.2762E-69 2 60316 202.03 202.03 1 0.87533 0.99248 0 96294000 52342000 43952000 1775 809 663 683 2786;2787 2787 ALAEVDVISLEQGK 14 1 0 Unmodified _ALAEVDVISLEQGK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.411 2 736.403763 1470.79297 71943.63 0.80851 0.00059539 -0.21486 -0.00015823 0.59364 0.00043716 736.403370042799 740.410776057538 98.018 0.7397 98.018 97.711 98.451 -7.6294E-06 397 64 8 0 0 0 1.6085E-14 2 61158 132.76 132.76 1 0.89117 1.0165 0 152810000 76768000 76044000 1776 809 663 683 2788;2789 2789 ALAEVDVISLEQGK 14 1 0 Unmodified _ALAEVDVISLEQGK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.906 2 736.403763 1470.79297 71166.27 0.90354 0.00066537 -0.24082 -0.00017734 0.66272 0.00048803 736.403477582277 740.410741923275 111.49 0.56434 111.49 111.19 111.75 -7.6294E-06 153 27 8 0 0 0 1.1627E-09 3 64582 121.08 121.08 1 1.2186 0.94696 0 15178000 6616800 8561300 1777 809 663 683 2790;2791;2792 2792 ALAEVDVISLEQGK 14 1 0 Unmodified _ALAEVDVISLEQGK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.4115 2 736.403763 1470.79297 71112.42 0.71734 0.00052825 -0.0075491 -5.5592E-06 0.70979 0.00052269 736.403610604068 740.410919775292 111.38 0.69077 111.38 110.99 111.68 0 153 36 8 0 0 0 8.1142E-05 2 63524 88.338 88.338 1 1.2553 1.0108 0 13767000 6272700 7494700 1778 809 663 683 2793;2794 2793 ALAEVDVISLEQGKK 15 2 0 Unmodified _ALAEVDVISLEQGKK_ 0 0 1 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.3046 3 533.969922 1598.88794 85615.77 0.45052 0.00024056 -0.012404 -6.6233E-06 0.43811 0.00023394 534.304521271248 539.311884030284 80.68 0.50485 80.68 80.442 80.947 0 109 39 4 0 0 0 0.019284 1 49161 21.841 16.412 1 0.65801 0.75861 0 28352000 17394000 10958000 1779 809 664 684 2795 2795 ALAEVDVISLEQGKK 15 2 0 Unmodified _ALAEVDVISLEQGKK_ 0 0 1 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.9699 3 533.969922 1598.88794 81979.76 0.56441 0.00030138 -0.28725 -0.00015338 0.27716 0.000148 533.969894678155 539.312544565222 93.692 0.61393 93.692 93.455 94.069 0 252 40 8 0 0 0 0.0061483 2 52318 29.491 19.294 1 1.2339 1.0547 0 12454000 5373000 7081300 1780 809 664 684 2796;2797 2797 ALAEVDVISLEQGKK 15 2 0 Unmodified _ALAEVDVISLEQGKK_ 0 0 1 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 800.4515 2 800.451245 1598.88794 68848.38 0.63457 0.00050794 0.12036 9.6341E-05 0.75493 0.00060428 800.451161277592 808.465542458217 93.666 0.47912 93.666 93.455 93.934 0 156 32 7 0 0 0 0.016695 1 52369 44.564 44.564 1 1.2111 1.0428 0 6071700 2665700 3406100 1781 809 664 684 2798 2798 ALAEVDVISLEQGKK 15 2 0 Unmodified _ALAEVDVISLEQGKK_ 0 0 1 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.9702 3 533.969922 1598.88794 81958.72 0.51075 0.00027272 -0.20833 -0.00011124 0.30242 0.00016148 533.970071609426 539.31249449393 93.498 0.89358 93.498 93.169 94.062 0 293 59 9 0 0 0 0.0025393 3 51334 35.037 24.183 1 1.2708 1.0758 0 15128000 6367800 8760300 1782 809 664 684 2799;2800;2801 2800 ALAEVDVISLEQGKK 15 2 0 Unmodified _ALAEVDVISLEQGKK_ 0 0 1 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 808.4667 2 800.451245 1598.88794 68735.09 0.54991 0.00044018 0.31928 0.00025557 0.86919 0.00069575 800.451264655701 808.465695196757 93.488 0.52121 93.488 93.275 93.796 -7.6294E-06 155 34 7 0 0 0 0.0010202 2 51335 68.44 68.44 1 1.3509 1.1398 0 8514400 3599900 4914500 1783 809 664 684 2802;2803 2802 ALAILSQPTPSLVVDHER 18 0 1 Unmodified _ALAILSQPTPSLVVDHER_ 0 0 0 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.36 3 649.361702 1945.06328 77132.1 0.66936 0.00043466 -0.15185 -9.8608E-05 0.51751 0.00033605 649.696042822043 653.031954803203 99.508 0.41571 99.508 99.304 99.72 0 73 33 4 0 0 0 0.019874 1 60897 31.883 31.883 1 0.87011 0.86671 0 8130100 3453500 4676600 1784 278 665 685 2804 2804 ALAILSQPTPSLVVDHER 18 0 1 Unmodified _ALAILSQPTPSLVVDHER_ 0 0 0 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.6747 3 649.361702 1945.06328 76703.18 1.0959 0.00071162 0.16327 0.00010602 1.2591 0.00081764 649.696130031879 653.032052567673 98.624 0.40025 98.624 98.381 98.781 0 102 31 5 0 0 0 0.027721 1 61787 29.687 29.687 1 0.66094 0.65945 0 11605000 6741200 4863600 1785 278 665 685 2805 2805 ALAILSQPTPSLVVDHER 18 0 1 Unmodified _ALAILSQPTPSLVVDHER_ 0 0 0 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.0327 3 649.361702 1945.06328 77837.01 0.97169 0.00063098 -0.28423 -0.00018457 0.68746 0.00044641 649.695825040863 652.697490964643 111.69 0.24759 111.69 111.57 111.81 0 59 13 7 0 0 0 0.001684 1 64792 22.646 18.842 1 1.4302 1.1957 0 3631000 1942200 1688800 1786 278 665 685 2806 2806 ALAILSQPTPSLVVDHER 18 0 1 Unmodified _ALAILSQPTPSLVVDHER_ 0 0 0 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.6985 3 649.361702 1945.06328 79329.81 0.66702 0.00043313 0.074147 4.8148E-05 0.74116 0.00048128 649.36121024783 652.698038204501 111.48 0.27597 111.48 111.33 111.6 -7.6294E-06 53 14 6 0 0 0 0.00010883 2 63680 42.059 42.059 1 1.3735 1.207 0 3611200 1666500 1944700 1787 278 665 685 2807;2808 2808 ALALDCEMVGVGPK 14 1 0 Oxidation (M) _ALALDCEM(ox)VGVGPK_ ALALDCEM(1)VGVGPK ALALDCEM(81.02)VGVGPK 0 1 0 Q9GZR2;B4E331;B4DJ95;A0A0C4DG22 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.3748 2 738.365269 1474.71599 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.191 1 75.191 74.691 75.691 0 0 0 0 0.00028952 1 44188 81.017 45.793 1 1788 2021 666 686 2809 2809 1855 ALALDCEMVGVGPK 14 1 0 Oxidation (M) _ALALDCEM(ox)VGVGPK_ ALALDCEM(1)VGVGPK ALALDCEM(40.15)VGVGPK 0 1 0 Q9GZR2;B4E331;B4DJ95;A0A0C4DG22 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.3743 2 738.365269 1474.71599 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.073 1 74.073 73.573 74.573 0 0 0 0 0.023815 1 44543 40.154 16.778 1 1789 2021 666 686 2810 2810 1855 ALALDCEMVGVGPK 14 1 0 Oxidation (M) _ALALDCEM(ox)VGVGPK_ ALALDCEM(1)VGVGPK ALALDCEM(72.2)VGVGPK 0 1 0 Q9GZR2;B4E331;B4DJ95;A0A0C4DG22 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.3721 2 738.365269 1474.71599 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.113 1 74.113 73.613 74.613 0 0 0 0 0.00069657 1 44570 72.2 51.897 1 1790 2021 666 686 2811 2811 1855 ALALNCFAPINDQEGAEAK 19 1 0 Unmodified _ALALNCFAPINDQEGAEAK_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1016.493 2 1016.49385 2030.97314 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.923 1 99.923 99.423 100.42 0 0 0 0 0.0029298 1 61222 52.555 44.042 1 1791 406 667 687 2812 2812 ALALNCFAPINDQEGAEAK 19 1 0 Unmodified _ALALNCFAPINDQEGAEAK_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1016.9954 2 1016.49385 2030.97314 60307.75 0.64888 0.00065958 0.56281 0.00057209 1.2117 0.0012317 1016.49555700272 1020.5005102969 112.45 0.37828 112.45 112.25 112.63 0 97 20 6 0 0 0 1.0499E-05 2 65298 72.891 69.175 1 1.0938 0.87521 0 7156600 4193800 2962700 1792 406 667 687 2813;2814 2814 ALAQEDQGAGEVER 14 0 1 Unmodified _ALAQEDQGAGEVER_ 0 0 0 O15020 O15020 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8557 2 736.852426 1471.6903 NaN NaN NaN -0.52185 -0.00038453 NaN NaN NaN NaN 28.054 0.11678 28.054 28.015 28.132 0 0 0 0 0.0051735 1 13159 56.087 36.816 1 NaN NaN 0 2352200 0 2352200 1793 1372 668 688 2815 2815 ALASILLQDHIR 12 0 1 Unmodified _ALASILLQDHIR_ 0 0 0 F5H6I7;B4DXC4;Q6DD88;F5GWF8 F5H6I7 F5H6I7 ATL3 Atlastin-3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3978 2 675.398618 1348.78268 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.594 1 88.594 88.094 89.094 0 0 0 0 0.029791 1 54642 45.908 10.397 1 1794 1047 669 689 2816 2816 ALASNTSFFSGCSPIEEEAH 20 0 0 Unmodified _ALASNTSFFSGCSPIEEEAH_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1078.4803 2 1077.47585 2152.93715 NaN NaN NaN -1.9304 -0.0020799 NaN NaN NaN NaN 99.593 0.33722 99.593 99.446 99.783 7.6294E-06 0 0 0 5.2578E-05 3 62405 60.49 53.119 1 1795 1803 670 690 2817;2818;2819 2817 ALASNTSFFSGCSPIEEEAH 20 0 0 Unmodified _ALASNTSFFSGCSPIEEEAH_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1077.4758 2 1077.47585 2152.93715 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.573 1 99.573 99.073 100.07 0 0 0 0 0.033736 1 62429 36.284 27.555 1 1796 1803 670 690 2820 2820 ALASNTSFFSGCSPIEEEAH 20 0 0 Unmodified _ALASNTSFFSGCSPIEEEAH_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1077.9731 2 1077.47585 2152.93715 NaN NaN NaN -1.9248 -0.0020739 NaN NaN NaN NaN 112.67 0.32932 112.67 112.5 112.83 -7.6294E-06 0 0 0 0.00052047 1 65472 51.463 45.857 1 1797 1803 670 690 2821 2821 ALATHPGISFYEEPR 15 0 1 Unmodified _ALATHPGISFYEEPR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.2855 3 563.286133 1686.83657 81281.91 0.73076 0.00041163 0.2215 0.00012477 0.95226 0.0005364 563.286440417189 566.622014808406 71.762 1.2133 71.762 71.368 72.581 -7.6294E-06 314 97 6 0 0 0 0.0001093 2 41783 59.261 59.261 1 0.7525 0.76986 0 31894000 18165000 13729000 1798 1699 671 691 2822;2823 2822 ALATHPGISFYEEPR 15 0 1 Unmodified _ALATHPGISFYEEPR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.2849 3 563.286133 1686.83657 80089.72 0.54993 0.00030977 -0.54557 -0.00030731 0.0043585 2.4551E-06 563.2859700794 566.622011715011 70.171 0.71178 70.171 69.706 70.418 0 268 59 6 0 0 0 0.00012615 1 41860 58.09 58.09 1 0.84381 0.94201 0 44279000 23074000 21205000 1799 1699 671 691 2824 2824 ALATHPGISFYEEPR 15 0 1 Unmodified _ALATHPGISFYEEPR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.9572 3 563.286133 1686.83657 80720.71 0.59489 0.0003351 0.043394 2.4443E-05 0.63829 0.00035954 563.286293595996 566.622139928978 81.74 1.0856 81.74 81.45 82.536 0 215 63 7 0 0 0 0.011575 3 44299 24.455 24.455 1 1.4671 1.2343 0 4491100 1698600 2792500 1800 1699 671 691 2825;2826;2827 2825 ALATHPGISFYEEPR 15 0 1 Unmodified _ALATHPGISFYEEPR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.9579 3 563.286133 1686.83657 80780.93 0.53798 0.00030304 0.32082 0.00018072 0.85881 0.00048375 563.286436648614 566.622312231249 81.773 0.90932 81.773 81.4 82.309 -7.6294E-06 147 32 7 0 0 0 0.010668 2 43509 25.59 25.59 1 1.5956 1.3618 0 4535000 1641900 2893000 1801 1699 671 691 2828;2829 2828 ALAVVYGPHEIR 12 0 1 Unmodified _ALAVVYGPHEIR_ 0 0 0 Q9NPD3;E9PPI9 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.2506 3 442.250583 1323.72992 92496.87 -0.036349 -1.6075E-05 0.52291 0.00023126 0.48656 0.00021518 442.250678556256 445.586865299665 61.61 0.77425 61.61 61.247 62.021 0 240 62 6 0 0 0 0.0061329 1 35247 39.73 39.73 1 0.80819 0.83926 0 22420000 12991000 9428400 1802 2056 672 692 2830 2830 ALAVVYGPHEIR 12 0 1 Unmodified _ALAVVYGPHEIR_ 0 0 0 Q9NPD3;E9PPI9 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 442.2503 3 442.250583 1323.72992 92183.08 -0.30037 -0.00013284 0.42209 0.00018667 0.12173 5.3834E-05 442.250777289783 445.586779904959 70.594 0.65532 70.594 70.3 70.956 0 183 43 6 0 0 0 0.04944 1 37044 20.427 20.427 1 1.0132 0.86554 0 5765000 2854400 2910600 1803 2056 672 692 2831 2831 ALAVVYGPHEIR 12 0 1 Unmodified _ALAVVYGPHEIR_ 0 0 0 Q9NPD3;E9PPI9 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.8744 2 662.872237 1323.72992 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.581 1 70.581 70.081 71.081 0 0 0 0 0.008612 1 37088 50.292 14.781 1 1804 2056 672 692 2832 2832 ALAVVYGPHEIR 12 0 1 Unmodified _ALAVVYGPHEIR_ 0 0 0 Q9NPD3;E9PPI9 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 442.2509 3 442.250583 1323.72992 92504.06 -0.25445 -0.00011253 0.50107 0.0002216 0.24662 0.00010907 442.585056201301 445.586859363416 70.8 0.49116 70.8 70.589 71.08 0 187 39 6 0 0 0 0.02165 1 36445 29.303 29.303 1 1.1137 0.95031 0 4539700 2494600 2045100 1805 2056 672 692 2833 2833 ALDCSSSIR 9 0 1 Unmodified _ALDCSSSIR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.7424 2 504.742573 1007.47059 83231.48 0.40821 0.00020604 -0.26738 -0.00013496 0.14083 7.1083E-05 504.742465834246 509.746487126833 25.088 0.38395 25.088 24.835 25.219 0 56 14 6 0 0 0 0.0012209 2 10722 88.294 88.294 1 0.68611 0.78168 0 49562000 29367000 20195000 1806 168 673 693 2834;2835 2835 ALDCSSSIR 9 0 1 Unmodified _ALDCSSSIR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 504.7419 2 504.742573 1007.47059 82623.53 0.357 0.0001802 -0.46175 -0.00023307 -0.10475 -5.287E-05 504.74247762809 509.746469818254 28.054 0.5033 28.054 27.835 28.338 0 96 24 5 0 0 0 0.03089 2 11200 45.68 39.899 1 1.7298 1.472 0 5399000 2052800 3346300 1807 168 673 693 2836;2837 2837 ALDCSSSIR 9 0 1 Unmodified _ALDCSSSIR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.7423 2 504.742573 1007.47059 84015.87 0.029165 1.4721E-05 -0.24912 -0.00012574 -0.21995 -0.00011102 504.742488639655 509.746455853918 28.164 0.35308 28.164 27.975 28.328 -1.9073E-06 67 14 7 0 0 0 0.014597 2 10685 55.531 51.784 1 1.8975 1.6573 0 3540900 1185600 2355300 1808 168 673 693 2838;2839 2839 ALDEGDIALLK 11 1 0 Unmodified _ALDEGDIALLK_ 0 0 0 A0A140VK70;P35998;C9JLS9 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.3314 2 579.324254 1156.63395 79229.34 0.52603 0.00030474 0.39267 0.00022749 0.91871 0.00053223 579.324535339172 583.331278092854 91.404 0.63217 91.404 91.108 91.74 0 201 52 5 0 0 0 6.5485E-08 1 56562 114.97 73.542 1 2.3627 2.4486 0 33295000 8742300 24552000 1809 620 674 694 2840 2840 ALDELMDGDIIVFQK 15 1 0 Oxidation (M) _ALDELM(ox)DGDIIVFQK_ ALDELM(1)DGDIIVFQK ALDELM(85.81)DGDIIVFQK 0 1 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.4421 2 861.93457 1721.85459 67219.65 0.64163 0.00055305 -0.71377 -0.00061522 -0.072136 -6.2176E-05 861.93486870704 866.442235079673 110.78 0.53414 110.78 110.43 110.96 0 146 40 6 0 0 0 2.1434E-05 1 71346 85.813 71.394 1 1.1345 1.1452 0 13260000 5724700 7535700 1810 1954 675 695 2841 2841 1802 ALDIPLVK 8 1 0 Unmodified _ALDIPLVK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.7788 2 434.778754 867.542954 92470.8 0.42331 0.00018405 0.33478 0.00014555 0.75809 0.0003296 434.77872975801 438.786029036889 93.14 0.67554 93.14 92.63 93.306 0 181 58 4 0 0 0 0.039038 1 56236 47.743 10.185 1 1.0284 1.0889 0 31261000 15422000 15839000 1811 1854 676 696 2842 2842 ALDIPLVK 8 1 0 Unmodified _ALDIPLVK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.7861 2 434.778754 867.542954 91817.01 0.087964 3.8245E-05 -0.13781 -5.9917E-05 -0.049845 -2.1672E-05 434.778558669445 438.785724367766 93.356 0.47426 93.356 93.231 93.705 7.6294E-06 141 40 6 0 0 0 0.011407 2 56678 69.998 41.892 1 0.89921 0.90535 0 27142000 12163000 14979000 1812 1854 676 696 2843;2844 2843 ALDLADMITR 10 0 1 Unmodified _ALDLADMITR_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.2994 2 559.797349 1117.58014 NaN NaN NaN -0.58495 -0.00032746 NaN NaN NaN NaN 117.85 0.30397 117.85 117.67 117.98 0 0 0 0 0.042278 2 68590 48.794 24.639 1 NaN NaN 0 331740 331740 0 1813 1589 677 697 2845;2846 2845 ALDLVGPTPATPAAPGER 18 0 1 Unmodified _ALDLVGPTPATPAAPGER_ 0 0 0 Q9NS39 Q9NS39 Q9NS39 ADARB2 Double-stranded RNA-specific editase B2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.9722 2 866.965051 1731.91555 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.264 1 88.264 87.764 88.764 0 0 0 0 0.002649 1 54444 53.754 29.903 1 1814 2066 678 698 2847 2847 ALDQFVNFSEQK 12 1 0 Unmodified _ALDQFVNFSEQK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.3585 2 713.354074 1424.69359 72483.73 0.81668 0.00058259 0.47408 0.00033819 1.2908 0.00092077 713.856090534865 717.361150881934 88.963 0.69315 88.963 88.459 89.153 0 168 52 5 0 0 0 0.0033141 1 53354 56.359 56.359 1 1.1677 1.1447 0 22505000 11060000 11445000 1815 803 679 699 2848 2848 ALDQFVNFSEQK 12 1 0 Unmodified _ALDQFVNFSEQK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.3609 2 713.354074 1424.69359 72832.72 0.56186 0.0004008 0.53421 0.00038108 1.0961 0.00078188 713.354307669239 717.36156457836 101.5 0.66664 101.5 101.09 101.76 -7.6294E-06 177 44 5 0 0 0 0.04745 1 57329 33.057 33.057 1 1.1729 0.93029 0 4474700 2107300 2367400 1816 803 679 699 2849 2849 ALDQFVNFSEQK 12 1 0 Unmodified _ALDQFVNFSEQK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.3631 2 713.354074 1424.69359 73804.36 0.54177 0.00038648 0.69426 0.00049525 1.236 0.00088173 713.354406152807 717.361837014639 101.44 0.60629 101.44 101.03 101.64 0 152 36 5 0 0 0 0.0077781 1 56500 48.284 48.284 1 1.2399 1.0101 0 4600500 2085000 2515500 1817 803 679 699 2850 2850 ALDQSDNDMSAVYR 14 0 1 Oxidation (M) _ALDQSDNDM(ox)SAVYR_ ALDQSDNDM(1)SAVYR ALDQSDNDM(182.35)SAVYR 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.8539 2 800.849026 1599.6835 69124.51 0.76953 0.00061627 -0.16452 -0.00013176 0.605 0.00048452 801.351342726493 805.853234500616 34.712 0.50159 34.712 34.491 34.993 -3.8147E-06 209 42 7 0 0 0 5.5607E-47 2 17365 182.35 182.35 1 1.5741 1.6109 0 35804000 14596000 21208000 1818 1194;1193 680 700 2851;2852 2852 908 ALDQSDNDMSAVYR 14 0 1 Oxidation (M) _ALDQSDNDM(ox)SAVYR_ ALDQSDNDM(1)SAVYR ALDQSDNDM(142.1)SAVYR 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 805.8533 2 800.849026 1599.6835 68272.76 0.57788 0.00046279 -0.22385 -0.00017927 0.35403 0.00028352 800.849084812564 805.853446787499 33.961 0.62511 33.961 33.63 34.256 0 233 48 8 0 0 0 2.3638E-21 2 17053 142.1 142.1 1 1.6292 1.794 0 41057000 17964000 23093000 1819 1194;1193 680 700 2853;2854 2854 908 ALDQSDNDMSAVYR 14 0 1 Oxidation (M) _ALDQSDNDM(ox)SAVYR_ ALDQSDNDM(1)SAVYR ALDQSDNDM(71.18)SAVYR 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 805.8541 2 800.849026 1599.6835 68361.01 0.38304 0.00030676 0.34859 0.00027917 0.73163 0.00058593 800.849443571563 805.853424754939 39.995 0.6573 39.995 39.674 40.331 0 185 51 5 0 0 0 9.0641E-05 1 18381 71.176 71.176 1 1.2811 1.1017 0 6777500 3511400 3266100 1820 1194;1193 680 700 2855 2855 908 ALDQSDNDMSAVYR 14 0 1 Oxidation (M) _ALDQSDNDM(ox)SAVYR_ ALDQSDNDM(1)SAVYR ALDQSDNDM(80.24)SAVYR 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 805.8528 2 800.849026 1599.6835 69024.77 0.3114 0.00024938 -0.12726 -0.00010191 0.18414 0.00014747 800.849086983765 805.853097615109 40.291 0.63394 40.291 40.005 40.638 0 229 53 6 0 0 0 6.2736E-05 1 17998 80.245 80.245 1 1.4395 1.1764 0 13084000 4627100 8456500 1821 1194;1193 680 700 2856 2856 908 ALEAEQVEITVGR 13 0 1 Unmodified _ALEAEQVEITVGR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.8845 2 707.880456 1413.74636 NaN NaN NaN -0.8876 -0.00062831 NaN NaN NaN NaN 90.312 0.31973 90.312 90.173 90.493 0 0 0 0 0.0070158 1 50007 54.7 33.829 1 NaN NaN 0 2017200 0 2017200 1822 397;1622 681 701 2857 2857 ALEAVFGK 8 1 0 Unmodified _ALEAVFGK_ 0 0 0 H0Y6E7;H3BT71;P38159;H3BR27;H3BNC1 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.7398 2 417.739628 833.464704 93659.41 0.14569 6.0859E-05 0.27523 0.00011497 0.42091 0.00017583 417.739658286118 421.746798331238 61.991 0.63296 61.991 61.562 62.195 3.8147E-06 206 50 6 0 0 0 0.0083247 2 35524 79.116 24.591 1 1.3208 1.4947 0 101650000 47784000 53864000 1823 1284 682 702 2858;2859 2858 ALEAVFGK 8 1 0 Unmodified _ALEAVFGK_ 0 0 0 H0Y6E7;H3BT71;P38159;H3BR27;H3BNC1 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.7397 2 417.739628 833.464704 94474.59 -0.010669 -4.4569E-06 0.46784 0.00019543 0.45717 0.00019098 417.739750713937 421.746916250078 60.624 0.40919 60.624 60.355 60.764 0 114 27 6 0 0 0 0.0083247 1 35450 79.116 26.433 1 1.1027 1.2547 0 146780000 69834000 76947000 1824 1284 682 702 2860 2860 ALEAVFGK 8 1 0 Unmodified _ALEAVFGK_ 0 0 0 H0Y6E7;H3BT71;P38159;H3BR27;H3BNC1 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 417.7396 2 417.739628 833.464704 94752.14 -0.54761 -0.00022876 0.86343 0.00036069 0.31582 0.00013193 417.739850855445 421.747043100792 70.912 0.95149 70.912 70.51 71.462 0 238 63 6 0 0 0 0.030669 1 37176 51.787 18.049 1 0.74246 0.59463 0 8524900 4828400 3696500 1825 1284 682 702 2861 2861 ALECFCQAASEVGKEEFLDR 20 1 1 Unmodified _ALECFCQAASEVGKEEFLDR_ 0 0 1 G3V198;Q12769;E9PR16 G3V198 G3V198 NUP160 Nuclear pore complex protein Nup160 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.0298 3 787.027954 2358.06203 69832.52 0.70898 0.00055799 -0.0089962 -7.0803E-06 0.69998 0.00055091 787.362633757157 793.369644111081 111.96 0.32775 111.96 111.8 112.13 7.6294E-06 44 16 4 0 0 0 0.040593 1 64088 17.296 16.029 1 0.58098 0.49634 0 2858400 1899600 958810 1826 1271 683 703 2862 2862 ALECLPSK 8 1 0 Unmodified _ALECLPSK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.2419 2 459.241678 916.468803 NaN NaN NaN 0.45814 0.0002104 NaN NaN NaN NaN 36.474 0.37859 36.474 36.254 36.633 0 0 0 0 0.028018 1 18423 60.478 35.974 1 NaN NaN 0 9980700 9980700 0 1827 1741 684 704 2863 2863 ALECLPSK 8 1 0 Unmodified _ALECLPSK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2488 2 459.241678 916.468803 94512.62 1.0132 0.00046529 0.23155 0.00010634 1.2447 0.00057163 459.241822942515 463.248623386828 35.614 0.52348 35.614 35.254 35.777 0 125 47 4 0 0 0 0.010755 2 18138 71.501 47.529 1 1.069 1.1073 0 18712000 9137000 9574900 1828 1741 684 704 2864;2865 2864 ALECLPSK 8 1 0 Unmodified _ALECLPSK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 463.248 2 459.241678 916.468803 91466.44 -0.18395 -8.4477E-05 -0.55627 -0.00025546 -0.74022 -0.00033994 459.24204138873 463.248334735921 41.35 0.56649 41.35 41.102 41.669 0 138 43 5 0 0 0 0.059544 1 18628 40.268 19.713 1 1.4695 1.1859 0 4309900 1547800 2762000 1829 1741 684 704 2866 2866 ALEDAFLAIDAK 12 1 0 Unmodified _ALEDAFLAIDAK_ 0 0 0 B4DDC8;B3KXL8;Q6IAU5;B2R665;O15355 B4DDC8 B4DDC8 PPM1G Protein phosphatase 1G MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8499 2 638.84281 1275.67107 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.81 1 106.81 106.31 107.31 0 0 0 0 4.5147E-05 1 68073 93.058 59.261 1 1830 839 685 705 2867 2867 ALEDLAGFK 9 1 0 Unmodified _ALEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.2679 2 482.260925 962.507297 87532.27 0.14388 6.9387E-05 0.24346 0.00011741 0.38733 0.0001868 482.261011542418 486.268004579064 79.074 1.1071 79.074 78.685 79.792 0 527 99 8 0 0 0 0.0013285 2 46792 86.833 50.953 1 1.7742 2.0988 0 417790000 148510000 269270000 1831 1569 686 706 2868;2869 2868 ALEDLAGFK 9 1 0 Unmodified _ALEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2611 2 482.260925 962.507297 87728.41 0.113 5.4495E-05 0.25042 0.00012077 0.36342 0.00017526 482.26102754169 486.268032911384 78.042 1.1936 78.042 77.674 78.868 -7.6294E-06 507 102 8 0 0 0 0.0014644 2 47296 85.064 48.043 1 1.7791 2.0747 0 259710000 87170000 172540000 1832 1569 686 706 2870;2871 2871 ALEDLAGFK 9 1 0 Unmodified _ALEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 963.8003 1 963.514573 962.507297 63413.78 0.2012 0.00019386 0.29738 0.00028653 0.49858 0.00048039 963.514610892435 971.528925852389 78.074 0.6109 78.074 77.807 78.418 0 130 51 4 0 0 0 0.018767 1 47255 84.568 58.674 1 1.9629 2.029 0 24957000 11029000 13928000 1833 1569 686 706 2872 2872 ALEDLAGFK 9 1 0 Unmodified _ALEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 482.2608 2 482.260925 962.507297 87188.36 0.10192 4.915E-05 0.12958 6.2494E-05 0.2315 0.00011164 482.261030433373 486.267966954927 90.027 1.8424 90.027 89.586 91.429 0 566 119 10 0 0 0 0.027387 2 49660 47.082 23.11 1 3.4304 2.8651 0 49571000 12211000 37360000 1834 1569 686 706 2873;2874 2873 ALEDLAGFK 9 1 0 Unmodified _ALEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.2614 2 482.260925 962.507297 86525.65 0.13347 6.4367E-05 0.062714 3.0244E-05 0.19618 9.4612E-05 482.260945091174 486.267952146449 90.003 1.5615 90.003 89.607 91.168 0 463 98 8 0 0 0 0.0031664 3 49036 72.485 35.464 1 3.3198 2.7755 0 44124000 8781000 35343000 1835 1569 686 706 2875;2876;2877 2876 ALEDLVDFK 9 1 0 Unmodified _ALEDLVDFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.2865 2 525.279315 1048.54408 83769.35 0.36758 0.00019308 0.15748 8.2721E-05 0.52506 0.0002758 525.279976483114 529.286151063422 99.069 1.3208 99.069 98.614 99.935 0 555 108 8 0 0 0 0.003784 1 60444 70.919 36.111 1 1.8068 2.058 0 171360000 61873000 109490000 1836 1569 687 707 2878 2878 ALEDLVDFK 9 1 0 Unmodified _ALEDLVDFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.2866 2 525.279315 1048.54408 83890.41 0.55155 0.00028972 0.11691 6.1412E-05 0.66846 0.00035113 525.279875333325 529.286179555106 98.397 1.2611 98.397 97.971 99.232 0 559 108 8 0 0 0 0.0018606 2 61904 79.906 36.66 1 1.8518 2.1807 0 480790000 166410000 314380000 1837 1569 687 707 2879;2880 2880 ALEDLVDFK 9 1 0 Unmodified _ALEDLVDFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1049.5537 1 1049.55135 1048.54408 59838 0.72161 0.00075737 0.071342 7.4877E-05 0.79296 0.00083225 1049.55113555325 1057.56558233677 98.438 0.81628 98.438 98.06 98.877 0 234 69 5 0 0 0 0.00070256 1 61825 101.64 67.847 1 1.9532 1.9943 0 31400000 11730000 19670000 1838 1569 687 707 2881 2881 ALEDLVDFK 9 1 0 Unmodified _ALEDLVDFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.2798 2 525.279315 1048.54408 83557.52 0.60735 0.00031903 0.0103 5.4103E-06 0.61765 0.00032444 525.27938138145 529.286348006445 111.59 1.4115 111.59 111.21 112.63 -7.6294E-06 325 79 9 0 0 0 0.0049382 2 64580 67.993 35.152 1 3.5933 3.0882 0 86376000 18947000 67430000 1839 1569 687 707 2882;2883 2883 ALEDLVDFK 9 1 0 Unmodified _ALEDLVDFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.2866 2 525.279315 1048.54408 83739.78 0.4249 0.00022319 0.15697 8.2451E-05 0.58187 0.00030564 525.279503534036 529.286372556598 111.53 1.5373 111.53 111.17 112.71 0 381 83 9 0 0 0 0.0091583 4 63536 60.436 25.629 1 3.5911 3.0438 0 63807000 14405000 49402000 1840 1569 687 707 2884;2885;2886;2887 2884 ALEEANADLEVK 12 1 0 Unmodified _ALEEANADLEVK_ 0 0 0 CON__P02533;P02533;CON__Q6IFX2;CON__P08779;P08779;B4DWU0;B4E2J5 CON__P02533;CON__P08779 CON__P02533 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3329 2 651.332807 1300.65106 NaN NaN NaN -0.096416 -6.2799E-05 NaN NaN NaN NaN 56.661 1.0115 56.661 56.329 57.34 0 0 0 0 1.5439E-47 1 31871 177.06 133.26 1 NaN NaN 0 100770000 100770000 0 + 1841 1150;1159 688 708 2888 2888 ALEEANADLEVK 12 1 0 Unmodified _ALEEANADLEVK_ 0 0 0 CON__P02533;P02533;CON__Q6IFX2;CON__P08779;P08779;B4DWU0;B4E2J5 CON__P02533;CON__P08779 CON__P02533 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3329 2 651.332807 1300.65106 NaN NaN NaN 0.016179 1.0538E-05 NaN NaN NaN NaN 55.906 1.0228 55.906 55.417 56.44 0 0 0 0 2.2277E-06 1 31901 105.2 68.004 1 NaN NaN 0 137350000 137350000 0 + 1842 1150;1159 688 708 2889 2889 ALEEANADLEVK 12 1 0 Unmodified _ALEEANADLEVK_ 0 0 0 CON__P02533;P02533;CON__Q6IFX2;CON__P08779;P08779;B4DWU0;B4E2J5 CON__P02533;CON__P08779 CON__P02533 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3336 2 651.332807 1300.65106 NaN NaN NaN -0.18405 -0.00011988 NaN NaN NaN NaN 66.184 0.9237 66.184 65.686 66.609 0 0 0 0 2.1815E-13 1 34248 125.75 84.298 1 NaN NaN 0 20088000 20088000 0 + 1843 1150;1159 688 708 2890 2890 ALEEANADLEVK 12 1 0 Unmodified _ALEEANADLEVK_ 0 0 0 CON__P02533;P02533;CON__Q6IFX2;CON__P08779;P08779;B4DWU0;B4E2J5 CON__P02533;CON__P08779 CON__P02533 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.3334 2 651.332807 1300.65106 NaN NaN NaN 0.0074096 4.8261E-06 NaN NaN NaN NaN 66.741 1.1122 66.741 66.212 67.324 0 0 0 0 6.2536E-09 1 33827 116.52 77.496 1 NaN NaN 0 18705000 18705000 0 + 1844 1150;1159 688 708 2891 2891 ALEEANTELEVK 12 1 0 Unmodified _ALEEANTELEVK_ 0 0 0 CON__Q04695;Q04695;K7EPJ9;B4E2P9 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.8474 2 673.345914 1344.67728 75000.02 0.78165 0.00052632 -0.29103 -0.00019597 0.49062 0.00033035 673.345553754941 677.352266858262 57.212 0.76476 57.212 56.859 57.623 0 202 60 5 0 0 0 4.9192E-18 1 32259 145.34 115.6 1 0.19621 0.19387 0 25604000 21259000 4345100 + 1845 1168 689 709 2892 2892 ALEEANTELEVK 12 1 0 Unmodified _ALEEANTELEVK_ 0 0 0 CON__Q04695;Q04695;K7EPJ9;B4E2P9 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3461 2 673.345914 1344.67728 75317.39 0.47565 0.00032028 -0.65097 -0.00043833 -0.17532 -0.00011805 673.345797107948 677.351643685038 56.479 0.82441 56.479 55.854 56.678 3.8147E-06 183 63 5 0 0 0 4.1202E-29 1 32372 163.64 133.89 1 0.16619 0.17014 0 31766000 24600000 7166200 + 1846 1168 689 709 2893 2893 ALEEANTELEVK 12 1 0 Unmodified _ALEEANTELEVK_ 0 0 0 CON__Q04695;Q04695;K7EPJ9;B4E2P9 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 677.3528 2 673.345914 1344.67728 73461.19 0.64806 0.00043637 -0.67009 -0.0004512 -0.022035 -1.4837E-05 673.345878137983 677.352656345026 66.782 0.65871 66.782 66.46 67.118 0 213 41 7 0 0 0 3.0918E-08 2 34710 118.4 118.4 1 0.63385 0.49822 0 11191000 6670300 4520700 + 1847 1168 689 709 2894;2895 2895 ALEEANTELEVK 12 1 0 Unmodified _ALEEANTELEVK_ 0 0 0 CON__Q04695;Q04695;K7EPJ9;B4E2P9 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.3464 2 673.345914 1344.67728 73992.84 0.47936 0.00032277 -0.60546 -0.00040768 -0.1261 -8.4908E-05 673.345896316338 677.352727735986 67.361 0.6874 67.361 67.052 67.74 0 211 41 7 0 0 0 0.00012908 2 34370 94.087 84.829 1 0.65571 0.54083 0 11040000 6282100 4757600 + 1848 1168 689 709 2896;2897 2897 ALEEEEDDRPYDPEEEYDPER 21 0 2 Unmodified _ALEEEEDDRPYDPEEEYDPER_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 882.3692 3 875.69642 2624.06743 65897.04 0.35587 0.00031163 0.77699 0.00068041 1.1329 0.00099204 876.032040360626 882.703428071694 64.587 0.82616 64.587 64.186 65.013 0 214 73 5 0 0 0 1.6593E-09 3 37140 85.932 85.932 1 0.65352 0.70687 0 21559000 13437000 8121800 1849 2002 690 710 2898;2899;2900 2900 ALEEEEDDRPYDPEEEYDPER 21 0 2 Unmodified _ALEEEEDDRPYDPEEEYDPER_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.7026 3 875.69642 2624.06743 65483.87 0.52498 0.00045972 0.37774 0.00033079 0.90272 0.00079051 876.03099124281 882.703237208524 63.587 0.56071 63.587 63.223 63.784 0 241 47 8 0 0 0 3.7427E-12 2 37338 98.816 98.816 1 0.63639 0.68503 0 16364000 8244500 8119800 1850 2002 690 710 2901;2902 2902 ALEEEEDDRPYDPEEEYDPER 21 0 2 Unmodified _ALEEEEDDRPYDPEEEYDPER_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 882.7043 3 875.69642 2624.06743 64653.4 0.61387 0.00053756 0.20225 0.00017711 0.81612 0.00071467 876.364928428215 882.703068639961 74.589 0.67033 74.589 74.25 74.921 0 350 47 10 0 0 0 0.0028152 2 39430 24.679 24.679 1 1.7107 1.4376 0 12144000 4818400 7325500 1851 2002 690 710 2903;2904 2903 ALEEEEDDRPYDPEEEYDPER 21 0 2 Unmodified _ALEEEEDDRPYDPEEEYDPER_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 876.0317 3 875.69642 2624.06743 65199.41 0.14653 0.00012832 0.43659 0.00038232 0.58312 0.00051064 876.031162192563 882.703294718118 75.014 0.64318 75.014 74.767 75.41 7.6294E-06 308 43 10 0 0 0 4.9043E-08 2 39022 67.251 67.251 1 1.8591 1.7002 0 9528900 3535000 5993900 1852 2002 690 710 2905;2906 2906 ALEEELAGLK 10 1 0 Unmodified _ALEEELAGLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.7986 2 536.797872 1071.58119 82536.44 0.49323 0.00026476 -0.17966 -9.6441E-05 0.31357 0.00016832 536.797742907865 540.80472619494 78.277 0.98179 78.277 77.912 78.894 0 457 83 9 0 0 0 0.00039656 2 46187 87.639 41.667 1 0.89151 1.049 0 318720000 168740000 149990000 1853 69 691 711 2907;2908 2907 ALEEELAGLK 10 1 0 Unmodified _ALEEELAGLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1071.9752 1 1072.58847 1071.58119 59867.45 0.078919 8.4647E-05 0.022262 2.3878E-05 0.10118 0.00010853 1072.5882782857 1080.60267009133 78.204 0.4685 78.204 78.053 78.521 0 117 40 4 0 0 0 0.029283 1 46417 51.346 43.866 1 0.86146 0.88269 0 17644000 9452300 8192000 1854 69 691 711 2909 2909 ALEEELAGLK 10 1 0 Unmodified _ALEEELAGLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.7982 2 536.797872 1071.58119 82495.02 0.53104 0.00028506 -0.019853 -1.0657E-05 0.51119 0.0002744 536.797791286157 540.804844682981 77.26 0.97356 77.26 76.918 77.891 0 449 79 8 0 0 0 7.6247E-12 2 46592 141.52 79.413 1 0.87951 1.0338 0 361330000 188700000 172630000 1855 69 691 711 2910;2911 2911 ALEEELAGLK 10 1 0 Unmodified _ALEEELAGLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.7975 2 536.797872 1071.58119 81459.6 0.54868 0.00029453 0.16788 9.012E-05 0.71656 0.00038465 536.797901860812 540.8049682613 89.723 1.0933 89.723 89.214 90.307 0 448 75 10 0 0 0 0.0071254 2 49432 57.859 22.414 1 1.7338 1.4819 0 67964000 26219000 41745000 1856 69 691 711 2912;2913 2913 ALEEELAGLK 10 1 0 Unmodified _ALEEELAGLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.7971 2 536.797872 1071.58119 81777.63 0.3373 0.00018106 0.13782 7.3983E-05 0.47513 0.00025505 536.797919233638 540.804936713801 89.669 1.172 89.669 89.21 90.382 0 415 78 9 0 0 0 0.001108 2 48619 76.064 33.465 1 1.8192 1.5424 0 65185000 24463000 40721000 1857 69 691 711 2914;2915 2915 ALEEGLTPQEICDK 14 1 0 Unmodified _ALEEGLTPQEICDK_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9;A0A024RBA2;H0YHV5 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.3962 2 801.88762 1601.76069 NaN NaN NaN -0.10916 -8.7532E-05 NaN NaN NaN NaN 72.608 0.5412 72.608 72.35 72.892 0 0 0 0 0.00097533 1 42382 74.944 57.471 1 NaN NaN 0 9394300 0 9394300 1858 732 692 712 2916 2916 ALEEGLTPQEICDK 14 1 0 Unmodified _ALEEGLTPQEICDK_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9;A0A024RBA2;H0YHV5 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 805.8957 2 801.88762 1601.76069 NaN NaN NaN 0.13966 0.00011199 NaN NaN NaN NaN 71.625 0.46056 71.625 71.34 71.8 0 0 0 0 4.1456E-06 1 42795 96.64 78.582 1 NaN NaN 0 12429000 0 12429000 1859 732 692 712 2917 2917 ALEEGLTPQEICDK 14 1 0 Unmodified _ALEEGLTPQEICDK_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9;A0A024RBA2;H0YHV5 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 805.8951 2 801.88762 1601.76069 NaN NaN NaN 0.27225 0.00021831 NaN NaN NaN NaN 83.409 0.50499 83.409 83.109 83.614 0 0 0 0 0.003335 1 44612 62.528 52.841 1 NaN NaN 0 1673000 0 1673000 1860 732 692 712 2918 2918 ALEEPGPAADPTAFQGPWAR 20 0 1 Unmodified _ALEEPGPAADPTAFQGPWAR_ 0 0 0 Q86Y56 Q86Y56 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1046.0126 2 1041.00798 2080.0014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.04 1 104.04 103.54 104.54 0 0 0 0 0.040579 1 65872 34.179 19.303 1 1861 1888 693 713 2919 2919 ALEESNYELEGK 12 1 0 Unmodified _ALEESNYELEGK_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3279 2 691.327721 1380.64089 NaN NaN NaN -0.068907 -4.7637E-05 NaN NaN NaN NaN 47.599 1.1329 47.599 47.271 48.404 3.8147E-06 0 0 0 3.6832E-05 1 26157 97.472 75.726 1 NaN NaN 0 749040000 749040000 0 + 1862 1161 694 714 2920 2920 ALEESNYELEGK 12 1 0 Unmodified _ALEESNYELEGK_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.3286 2 691.327721 1380.64089 NaN NaN NaN 0.00018378 1.2705E-07 NaN NaN NaN NaN 46.482 1.0281 46.482 46.241 47.269 0 0 0 0 5.4154E-20 1 25582 136.63 100.69 1 NaN NaN 0 732200000 732200000 0 + 1863 1161 694 714 2921 2921 ALEESNYELEGK 12 1 0 Unmodified _ALEESNYELEGK_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.3279 2 691.327721 1380.64089 NaN NaN NaN -0.42719 -0.00029533 NaN NaN NaN NaN 55.342 1.418 55.342 54.97 56.388 0 0 0 0 3.6693E-08 1 27594 107.79 71.844 1 NaN NaN 0 162250000 162250000 0 + 1864 1161 694 714 2922 2922 ALEFVTNPDIAAK 13 1 0 Unmodified _ALEFVTNPDIAAK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.8818 2 694.874642 1387.73473 75132.59 1.0211 0.00070951 -0.68124 -0.00047338 0.33983 0.00023614 694.873784771604 698.881586437907 90.538 0.78105 90.538 90.177 90.958 0 264 65 6 0 0 0 0.00010871 2 54539 96.015 96.015 1 1.2718 1.3796 0 45210000 18598000 26612000 1865 1412 695 715 2923;2924 2923 ALEFVTNPDIAAK 13 1 0 Unmodified _ALEFVTNPDIAAK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.8747 2 694.874642 1387.73473 75317.85 0.77355 0.00053752 -0.6116 -0.00042499 0.16195 0.00011253 694.874069972728 698.881493742249 89.754 0.73642 89.754 89.294 90.031 -7.6294E-06 298 61 7 0 0 0 2.3429E-05 2 55383 120.06 120.06 1 1.3062 1.4527 0 50800000 25304000 25497000 1866 1412 695 715 2925;2926 2926 ALEFVTNPDIAAK 13 1 0 Unmodified _ALEFVTNPDIAAK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.8752 2 694.874642 1387.73473 73953.12 0.49038 0.00034076 0.038824 2.6978E-05 0.52921 0.00036773 694.874399160171 698.88186408654 103.44 0.7374 103.44 103.09 103.83 0 230 47 7 0 0 0 0.00092989 2 58852 72.006 72.006 1 1.417 1.1365 0 8221100 3653300 4567800 1867 1412 695 715 2927;2928 2928 ALEFVTNPDIAAK 13 1 0 Unmodified _ALEFVTNPDIAAK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.8821 2 694.874642 1387.73473 73130.01 0.33503 0.00023281 0.022115 1.5367E-05 0.35715 0.00024817 694.874532882345 698.881916191073 103.25 0.80415 103.25 102.89 103.7 0 262 54 6 0 0 0 0.00030291 2 57712 70.977 70.977 1 1.4996 1.22 0 7094100 2981100 4113000 1868 1412 695 715 2929;2930 2929 ALEHSALAINHK 12 1 0 Unmodified _ALEHSALAINHK_ 0 0 0 P17812;B4E1E0;B4DMB5;A0A024RC00;Q9NRF8 P17812 P17812 CTPS1;CTPS2 CTP synthase 1;CTP synthase;CTP synthase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.242 3 435.242088 1302.70443 92427.33 -0.11311 -4.9228E-05 -0.059716 -2.5991E-05 -0.17282 -7.5219E-05 435.242189034434 437.913540094965 25.552 0.37096 25.552 25.393 25.763 0 98 20 9 0 0 0 5.8933E-07 2 11108 93.839 93.839 1 2.0548 2.2149 0 37718000 11251000 26468000 1869 1494 696 716 2931;2932 2932 ALEHSALAINHK 12 1 0 Unmodified _ALEHSALAINHK_ 0 0 0 P17812;B4E1E0;B4DMB5;A0A024RC00;Q9NRF8 P17812 P17812 CTPS1;CTPS2 CTP synthase 1;CTP synthase;CTP synthase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.3671 2 652.359493 1302.70443 NaN NaN NaN 0.13404 8.744E-05 NaN NaN NaN NaN 25.551 0.16756 25.551 25.486 25.654 0 0 0 0 5.0945E-20 1 11147 137.05 120.84 1 NaN NaN 0 5328300 0 5328300 1870 1494 696 716 2933 2933 ALEHSALAINHK 12 1 0 Unmodified _ALEHSALAINHK_ 0 0 0 P17812;B4E1E0;B4DMB5;A0A024RC00;Q9NRF8 P17812 P17812 CTPS1;CTPS2 CTP synthase 1;CTP synthase;CTP synthase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.9135 3 435.242088 1302.70443 91753.21 0.073265 3.1888E-05 -0.1472 -6.4068E-05 -0.073936 -3.218E-05 435.241938621652 437.913452822363 24.593 0.41305 24.593 24.36 24.773 0 80 20 6 0 0 0 6.9794E-05 1 10278 84.188 84.188 1 2.0342 2.0635 0 29631000 9731400 19900000 1871 1494 696 716 2934 2934 ALEHSALAINHK 12 1 0 Unmodified _ALEHSALAINHK_ 0 0 0 P17812;B4E1E0;B4DMB5;A0A024RC00;Q9NRF8 P17812 P17812 CTPS1;CTPS2 CTP synthase 1;CTP synthase;CTP synthase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 435.2413 3 435.242088 1302.70443 90945.9 -0.3913 -0.00017031 0.0035751 1.556E-06 -0.38772 -0.00016875 435.24200931114 437.913519173267 27.522 0.45884 27.522 27.304 27.763 -1.9073E-06 72 17 8 0 0 0 0.047955 1 10205 12.443 10.539 1 0.95109 0.75429 0 2349800 1105800 1244000 1872 1494 696 716 2935 2935 ALEHVPNSVR 10 0 1 Unmodified _ALEHVPNSVR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 374.5409 3 374.540245 1120.59891 97988.77 -0.067378 -2.5236E-05 -0.050046 -1.8744E-05 -0.11742 -4.398E-05 374.540089775221 377.876385385834 27.011 0.34545 27.011 26.863 27.209 0 78 18 6 0 0 0 0.00021336 2 12271 66.92 60.188 1 0.72974 0.74774 0 26038000 14067000 11970000 1873 1418 697 717 2936;2937 2936 ALEHVPNSVR 10 0 1 Unmodified _ALEHVPNSVR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 374.5403 3 374.540245 1120.59891 97787.39 0.10603 3.9711E-05 -0.1186 -4.442E-05 -0.012573 -4.7091E-06 374.540081249779 377.876402888908 26.393 0.28825 26.393 26.252 26.54 1.9073E-06 79 17 6 0 0 0 0.00082262 1 11846 56.043 45.494 1 0.76281 0.8335 0 37043000 20977000 16066000 1874 1418 697 717 2938 2938 ALEIADFSGNPLSR 14 0 1 Unmodified _ALEIADFSGNPLSR_ 0 0 0 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 A0A0G2JMS7 SCRIB Protein scribble homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.3736 2 745.385905 1488.75726 NaN NaN NaN -0.082856 -6.176E-05 NaN NaN NaN NaN 106.87 0.21235 106.87 106.74 106.96 0 0 0 0 0.00059794 2 66419 78.096 50.998 1 NaN NaN 0 3602100 0 3602100 1875 534 698 718 2939;2940 2939 ALEIADFSGNPLSR 14 0 1 Unmodified _ALEIADFSGNPLSR_ 0 0 0 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 A0A0G2JMS7 SCRIB Protein scribble homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.3868 2 745.385905 1488.75726 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.35 1 106.35 105.85 106.85 0 0 0 0 0.0028022 1 67703 59.542 31.337 1 1876 534 698 718 2941 2941 ALELALK 7 1 0 Unmodified _ALELALK_ 0 0 0 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.2442 2 379.244547 756.47454 NaN NaN NaN -0.3705 -0.00014051 NaN NaN NaN NaN 70.658 0.31339 70.658 70.543 70.856 0 0 0 0 0.029404 1 41134 86.866 36.747 1 NaN NaN 0 2300900 2300900 0 1877 2109 699 719 2942 2942 ALELALK 7 1 0 Unmodified _ALELALK_ 0 0 0 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.244 2 379.244547 756.47454 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.168 1 69.168 68.668 69.668 0 0 0 0 0.017643 1 41153 108.24 41.244 1 1878 2109 699 719 2943 2943 ALELDGQSVK 10 1 0 Unmodified _ALELDGQSVK_ 0 0 0 Q9UNE7;H3BS86 Q9UNE7 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.2945 2 530.287671 1058.56079 83156.83 0.13285 7.0451E-05 -0.16645 -8.8269E-05 -0.0336 -1.7818E-05 530.287534894573 534.294769465191 49.74 0.3467 49.74 49.535 49.882 0 71 22 4 0 0 0 0.0011014 1 27344 76.17 11.905 1 1.7528 1.7225 0 23387000 9532400 13855000 1879 2115 700 720 2944 2944 ALELDSNLYR 10 0 1 Unmodified _ALELDSNLYR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.3137 2 597.311677 1192.6088 78373.7 0.77842 0.00046496 0.2267 0.00013541 1.0051 0.00060037 597.311563805272 602.315976946302 78.842 0.82033 78.842 78.472 79.293 0 384 75 8 0 0 0 3.7136E-30 3 46730 176.6 142.35 1 1.6023 1.8727 0 202550000 75364000 127190000 1880 81 701 721 2945;2946;2947 2947 ALELDSNLYR 10 0 1 Unmodified _ALELDSNLYR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.3112 2 597.311677 1192.6088 79103.42 0.78161 0.00046687 0.050113 2.9933E-05 0.83173 0.0004968 597.311570895635 602.315820731943 77.779 0.93147 77.779 77.458 78.39 0 373 78 8 0 0 0 5.6632E-08 3 47030 114.5 78.215 1 1.7498 2.0081 0 185280000 65927000 119350000 1881 81 701 721 2948;2949;2950 2949 ALELDSNLYR 10 0 1 Unmodified _ALELDSNLYR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.312 2 597.311677 1192.6088 79770.52 0.43243 0.0002583 0.13217 7.8947E-05 0.5646 0.00033724 597.311664534057 602.315909402364 90.153 1.0996 90.153 89.783 90.883 0 321 72 9 0 0 0 1.4776E-05 2 49917 101.64 74.389 1 2.7677 2.3519 0 34047000 9517900 24529000 1882 81 701 721 2951;2952 2952 ALELDSNLYR 10 0 1 Unmodified _ALELDSNLYR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.3156 2 597.311677 1192.6088 79256.39 0.44206 0.00026405 0.076863 4.5911E-05 0.51892 0.00030996 597.311600444719 602.315879914247 90.153 1.1537 90.153 89.78 90.934 0 302 71 8 0 0 0 9.7206E-05 2 49012 97.431 67.228 1 2.7687 2.4151 0 31486000 8040000 23446000 1883 81 701 721 2953;2954 2953 ALELFVK 7 1 0 Unmodified _ALELFVK_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7EMM6 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 410.2517 2 410.252372 818.49019 95736.39 0.37274 0.00015292 -0.79104 -0.00032453 -0.4183 -0.00017161 410.251642099328 414.259295768775 85.119 0.58224 85.119 84.713 85.296 -7.6294E-06 165 48 5 0 0 0 0.031504 2 50919 67.035 18.861 1 1.3158 1.2922 0 23177000 9721500 13455000 1884 260 702 722 2955;2956 2956 ALELFVK 7 1 0 Unmodified _ALELFVK_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7EMM6 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.2521 2 410.252372 818.49019 98109.37 0.50606 0.00020761 -0.35917 -0.00014735 0.14689 6.0263E-05 410.251842326579 414.259394843031 83.916 0.66631 83.916 83.494 84.16 0 174 55 5 0 0 0 0.032902 1 51348 64.803 16.63 1 1.3692 1.3814 0 26909000 12788000 14121000 1885 260 702 722 2957 2957 ALELTGLK 8 1 0 Unmodified _ALELTGLK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.7606 2 422.760561 843.506569 92635.49 -0.16364 -6.918E-05 0.2139 9.0427E-05 0.050257 2.1247E-05 422.760506469628 426.767642030571 69.752 1.1664 69.752 69.304 70.471 0 453 101 7 0 0 0 0.029249 2 40338 52.716 13.544 1 1.0747 1.2561 0 280060000 138740000 141310000 1886 151 703 723 2958;2959 2959 ALELTGLK 8 1 0 Unmodified _ALELTGLK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.7682 2 422.760561 843.506569 92982.88 0.092267 3.9007E-05 0.13067 5.5243E-05 0.22294 9.425E-05 422.760452926895 426.767602491841 68.463 1.1032 68.463 68.009 69.113 0 434 91 8 0 0 0 0.013109 2 40460 66.073 14.286 1 1.0606 1.2386 0 276410000 134490000 141920000 1887 151 703 723 2960;2961 2961 ALELTGLK 8 1 0 Unmodified _ALELTGLK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 426.7676 2 422.760561 843.506569 90726.98 -0.36143 -0.0001528 0.51593 0.00021812 0.1545 6.5319E-05 422.76065014559 426.767732754757 79.678 0.90031 79.678 79.299 80.199 7.6294E-06 257 54 6 0 0 0 0.027047 1 42852 54.157 6.3086 1 0.53024 0.41167 0 14591000 9498100 5092700 1888 151 703 723 2962 2962 ALELTGLK 8 1 0 Unmodified _ALELTGLK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 426.7674 2 422.760561 843.506569 89768.25 -0.52598 -0.00022236 0.70874 0.00029963 0.18277 7.7267E-05 422.760693661437 426.767846716877 79.856 0.92686 79.856 79.41 80.337 0 254 55 6 0 0 0 0.049834 1 42033 43.808 6.2494 1 0.55844 0.45922 0 9998400 6429000 3569400 1889 151 703 723 2963 2963 ALEQIDENLIYWPR 14 0 1 Unmodified _ALEQIDENLIYWPR_ 0 0 0 Q9BXY0;H0YBV6;A0PJ56 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.9587 2 880.454319 1758.89408 64477.85 0.65531 0.00057697 -0.78043 -0.00068713 -0.12512 -0.00011016 880.453639972087 885.457525913033 117.76 0.56892 117.76 117.52 118.08 -7.6294E-06 227 35 9 0 0 0 1.1607E-30 2 75399 162.49 162.49 1 0.77129 0.8364 0 49819000 26539000 23280000 1890 2016 704 724 2964;2965 2965 ALEQIDENLIYWPR 14 0 1 Unmodified _ALEQIDENLIYWPR_ 0 0 0 Q9BXY0;H0YBV6;A0PJ56 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.4547 2 880.454319 1758.89408 64477.84 0.4872 0.00042896 -0.48488 -0.00042692 0.002319 2.0418E-06 880.95541752224 885.457722593715 117.28 0.52392 117.28 117.04 117.56 0 215 31 10 0 0 0 1.7576E-83 2 76848 218.75 218.75 1 0.73159 0.84888 0 64857000 35784000 29073000 1891 2016 704 724 2966;2967 2967 ALEQQVEEMK 10 1 0 Oxidation (M) _ALEQQVEEM(ox)K_ ALEQQVEEM(1)K ALEQQVEEM(127.68)K 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.803 2 610.795003 1219.57545 80087.22 0.3599 0.00021983 0.43111 0.00026332 0.79102 0.00048315 610.79517403418 614.802600703501 26.415 0.3275 26.415 26.212 26.54 0 60 19 5 0 0 0 1.1689E-09 1 11829 127.68 127.68 1 3.0086 3.0032 0 14587000 3148000 11439000 1892 81 705 725 2968 2968 51 ALERDPTEDDVESK 14 1 1 Unmodified _ALERDPTEDDVESK_ 0 0 1 A0A024R7K7;A0A024R7M6;Q86YP4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.8795 2 802.375931 1602.73731 68678.5 0.84395 0.00067716 0.34962 0.00028052 1.1936 0.00095769 802.37583366233 811.387472837531 24.408 0.22864 24.408 24.279 24.508 0 32 8 6 0 0 0 6.7654E-10 2 10137 124.86 124.86 1 0.83566 0.90446 0 15008000 7577200 7430500 1893 229 706 726 2969;2970 2970 ALERDPTEDDVESK 14 1 1 Unmodified _ALERDPTEDDVESK_ 0 0 1 A0A024R7K7;A0A024R7M6;Q86YP4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2529 3 535.253046 1602.73731 83550.09 0.46218 0.00024738 0.04046 2.1657E-05 0.50264 0.00026904 535.253122138583 541.594864752492 24.408 0.30679 24.408 24.26 24.566 0 38 11 6 0 0 0 5.143E-05 1 10152 70.281 50.54 1 0.57331 0.63729 0 19669000 13309000 6360300 1894 229 706 726 2971 2971 ALERDPTEDDVESK 14 1 1 Unmodified _ALERDPTEDDVESK_ 0 0 1 A0A024R7K7;A0A024R7M6;Q86YP4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.8778 2 802.375931 1602.73731 68390.88 0.30895 0.00024789 0.23021 0.00018471 0.53916 0.00043261 802.876903979927 811.387755299493 24.04 0.32018 24.04 23.958 24.278 0 39 12 5 0 0 0 1.0993E-05 2 9856 106.67 98.846 1 0.60888 0.67508 0 9409000 5156100 4252900 1895 229 706 726 2972;2973 2972 ALESDMAPVLIMATNR 16 0 1 2 Oxidation (M) _ALESDM(ox)APVLIM(ox)ATNR_ ALESDM(1)APVLIM(1)ATNR ALESDM(44.3)APVLIM(44.3)ATNR 0 2 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 882.4388 2 882.436954 1762.85936 63949.88 0.82491 0.00072793 -0.65357 -0.00057674 0.17133 0.00015119 882.436476143686 887.440592506711 82.485 1.1021 82.485 81.91 83.012 0 309 92 6 0 0 0 0.0023284 1 48958 44.299 44.299 1 1.4721 1.5059 0 33188000 14603000 18584000 1896 2120 707 727 2974 2974 1944;1945 ALESDMAPVLIMATNR 16 0 1 2 Oxidation (M) _ALESDM(ox)APVLIM(ox)ATNR_ ALESDM(1)APVLIM(1)ATNR ALESDM(55.04)APVLIM(55.04)ATNR 0 2 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.9457 2 882.436954 1762.85936 64068.93 0.76292 0.00067323 -0.74302 -0.00065567 0.019892 1.7554E-05 882.43626554877 887.440688532223 81.571 1.3185 81.571 80.918 82.237 0 354 113 6 0 0 0 0.00052326 1 49491 55.04 55.04 1 1.407 1.5204 0 26764000 10823000 15940000 1897 2120 707 727 2975 2975 1944;1945 ALESPERPFLAILGGAK 17 1 1 Unmodified _ALESPERPFLAILGGAK_ 0 0 1 B4E1H9;V9HWF4;P00558;B4DWQ3;B4DHM5 B4E1H9 B4E1H9 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.345 3 590.336716 1767.98832 81043.47 0.82725 0.00048836 -0.22817 -0.0001347 0.59909 0.00035366 590.336417202256 596.343953782678 109.8 0.77202 109.8 109.36 110.13 -7.6294E-06 136 50 4 0 0 0 0.0017539 1 70655 35.757 24.941 1 0.66032 0.74451 0 14346000 8689400 5656500 1898 1067 708 728 2976 2976 ALESPERPFLAILGGAK 17 1 1 Unmodified _ALESPERPFLAILGGAK_ 0 0 1 B4E1H9;V9HWF4;P00558;B4DWQ3;B4DHM5 B4E1H9 B4E1H9 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 590.3386 3 590.336716 1767.98832 79790.7 0.78738 0.00046482 0.26062 0.00015385 1.048 0.00061867 590.670853549866 596.344591574685 121.22 0.35374 121.22 121.05 121.4 0 60 15 7 0 0 0 0.009848 1 72093 24.481 12.96 1 0.67481 0.59733 0 2252200 1148700 1103500 1899 1067 708 728 2977 2977 ALESSIAPIVIFASNR 16 0 1 Unmodified _ALESSIAPIVIFASNR_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;J3QLR1;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.4751 2 844.472512 1686.93047 66990.38 0.79477 0.00067117 0.029289 2.4734E-05 0.82406 0.0006959 844.472525423957 849.476539676106 122.33 0.67106 122.33 122.05 122.72 0 270 48 8 0 0 0 9.6937E-09 1 79038 107.18 97.743 1 0.77462 0.86071 0 72825000 39450000 33375000 1900 1076 709 729 2978 2978 ALESSIAPIVIFASNR 16 0 1 Unmodified _ALESSIAPIVIFASNR_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;J3QLR1;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.4758 2 844.472512 1686.93047 66312.66 0.79048 0.00066754 0.046374 3.9161E-05 0.83685 0.0007067 844.472562492315 849.476504927102 121.8 0.61411 121.8 121.53 122.14 -7.6294E-06 270 44 8 0 0 0 1.9865E-08 2 80543 101.39 91.547 1 0.76375 0.87757 0 77660000 42458000 35202000 1901 1076 709 729 2979;2980 2979 ALESSIAPIVIFASNR 16 0 1 Unmodified _ALESSIAPIVIFASNR_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;J3QLR1;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 845.4694 2 844.472512 1686.93047 67062.31 1.164 0.00098294 0.22304 0.00018835 1.387 0.0011713 844.974022593382 849.477456248351 134.42 0.25061 134.42 134.3 134.56 1.5259E-05 67 10 10 0 0 0 5.0005E-05 3 82041 83.617 74.185 1 1.1032 0.94955 0 54044000 25324000 28719000 1902 1076 709 729 2981;2982;2983 2981 ALESSIAPIVIFASNR 16 0 1 Unmodified _ALESSIAPIVIFASNR_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;J3QLR1;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 844.4734 2 844.472512 1686.93047 67204.72 0.91746 0.00077477 0.18206 0.00015374 1.0995 0.00092851 844.973920229666 849.477503717992 134.31 0.28503 134.31 134.19 134.47 0 74 12 10 0 0 0 1.576E-09 2 81068 111.79 104.41 1 1.1761 1.0259 0 41314000 20436000 20878000 1903 1076 709 729 2984;2985 2985 ALESSLWELQALQR 14 0 1 Unmodified _ALESSLWELQALQR_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.4404 2 822.441212 1642.86787 NaN NaN NaN -0.75066 -0.00061738 NaN NaN NaN NaN 113.72 0.44936 113.72 113.5 113.95 0 0 0 0 7.206E-15 2 73870 120.06 98.069 1 NaN NaN 0 6090100 6090100 0 1904 2007 710 730 2986;2987 2986 ALESSLWELQALQR 14 0 1 Unmodified _ALESSLWELQALQR_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.4457 2 822.441212 1642.86787 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.64 1 125.64 125.14 126.14 0 0 0 0 1.4736E-16 1 75475 124.42 92.414 1 1905 2007 710 730 2988 2988 ALETCGGDLK 10 1 0 Unmodified _ALETCGGDLK_ 0 0 0 E5KS95;P43897;C9JG32;C9JT21;F8VPA7;F8VS27;F8WCK2 E5KS95 E5KS95 TSFM Elongation factor Ts, mitochondrial;Elongation factor Ts ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.2654 2 532.258056 1062.50156 NaN NaN NaN -1.6659 -0.00088669 NaN NaN NaN NaN 28.44 0.27959 28.44 28.345 28.624 0 0 0 0 0.0156 1 13590 57.55 13.103 1 NaN NaN 0 11052000 0 11052000 1906 1208 711 731 2989 2989 ALETDSVSGVSK 12 1 0 Unmodified _ALETDSVSGVSK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.8061 2 596.806425 1191.5983 78481.6 0.66675 0.00039792 0.35664 0.00021285 1.0234 0.00061077 596.806283283886 600.813701272938 35.051 0.62564 35.051 34.721 35.347 3.8147E-06 208 56 6 0 0 0 0.00018123 2 17481 74.944 72.2 1 1.0902 1.1798 0 36016000 19281000 16735000 1907 1336 712 732 2990;2991 2991 ALETDSVSGVSK 12 1 0 Unmodified _ALETDSVSGVSK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.8078 2 596.806425 1191.5983 78260.34 1.0479 0.0006254 0.20692 0.00012349 1.2548 0.00074889 596.806341794252 600.813517960805 34.278 0.40556 34.278 34.016 34.421 0 87 26 7 0 0 0 2.1874E-05 3 17359 102.52 85.958 1 1.1913 1.3275 0 51754000 26803000 24950000 1908 1336 712 732 2992;2993;2994 2994 ALETDSVSGVSK 12 1 0 Unmodified _ALETDSVSGVSK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 600.8141 2 596.806425 1191.5983 NaN NaN NaN 0.17534 0.00010464 NaN NaN NaN NaN 40.077 0.3867 40.077 39.855 40.241 0 0 0 0 0.029994 1 18318 39.918 39.918 1 NaN NaN 0 9606300 0 9606300 1909 1336 712 732 2995 2995 ALETLTGALFQRPPLIAAVK 20 1 1 Unmodified _ALETLTGALFQRPPLIAAVK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.087 3 703.75253 2108.23576 71845.68 0.93332 0.00065683 -0.27267 -0.00019189 0.66066 0.00046494 704.086685096597 710.094062822246 121.43 0.86887 121.43 121.08 121.95 0 421 56 10 0 0 0 1.8854E-07 2 78277 83.758 83.758 1 0.80339 0.97483 0 335480000 184860000 150630000 1910 1398 713 733 2996;2997 2997 ALETLTGALFQRPPLIAAVK 20 1 1 Unmodified _ALETLTGALFQRPPLIAAVK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.6273 2 1055.12516 2108.23576 59903.83 0.7717 0.00081424 -0.15021 -0.00015849 0.62149 0.00065575 1055.62645203069 1064.13629342071 121.43 0.52545 121.43 121.16 121.69 -7.6294E-06 221 33 9 0 0 0 4.4654E-08 1 78343 105.65 105.65 1 0.74062 0.8903 0 78568000 44041000 34527000 1911 1398 713 733 2998 2998 ALETLTGALFQRPPLIAAVK 20 1 1 Unmodified _ALETLTGALFQRPPLIAAVK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.0872 3 703.75253 2108.23576 71598.8 0.96108 0.00067636 -0.13174 -9.2715E-05 0.82933 0.00058365 704.086697165919 710.094197353952 120.84 0.82771 120.84 120.55 121.37 0 353 53 10 0 0 0 1.1235E-13 2 79752 110.37 110.37 1 0.81725 0.96767 0 211710000 116700000 95010000 1912 1398 713 733 2999;3000 3000 ALETLTGALFQRPPLIAAVK 20 1 1 Unmodified _ALETLTGALFQRPPLIAAVK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.6398 2 1055.12516 2108.23576 59921.51 0.82206 0.00086738 -0.17713 -0.0001869 0.64493 0.00068048 1055.62643311662 1064.13619118766 120.84 0.48746 120.84 120.6 121.09 0 198 31 8 0 0 0 0.012348 3 79787 49.423 49.423 1 0.73303 0.85429 0 44094000 25376000 18718000 1913 1398 713 733 3001;3002;3003 3002 ALETLTGALFQRPPLIAAVK 20 1 1 Unmodified _ALETLTGALFQRPPLIAAVK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.7612 3 703.75253 2108.23576 71882.74 0.81451 0.00057321 -0.083581 -5.882E-05 0.73092 0.00051439 704.086841747569 709.759940414783 133.7 0.80447 133.7 133.44 134.25 0 251 33 13 0 0 0 6.9246E-07 2 81346 73.928 73.928 1 0.65966 0.58919 0 73569000 43602000 29967000 1914 1398 713 733 3004;3005 3004 ALETLTGALFQRPPLIAAVK 20 1 1 Unmodified _ALETLTGALFQRPPLIAAVK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1064.6396 2 1055.12516 2108.23576 59116.23 0.34623 0.00036531 0.5058 0.00053369 0.85203 0.000899 1055.62705000919 1064.1369894377 133.7 0.41559 133.7 133.49 133.91 0 108 16 9 0 0 0 1.3718E-12 2 81433 118.76 118.76 1 0.64392 0.55533 0 12672000 8028500 4643200 1915 1398 713 733 3006;3007 3007 ALETLTGALFQRPPLIAAVK 20 1 1 Unmodified _ALETLTGALFQRPPLIAAVK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.0873 3 703.75253 2108.23576 72031 1.0571 0.00074394 -0.39006 -0.0002745 0.66705 0.00046944 704.086589962074 709.75973011447 133.39 0.69083 133.39 133.13 133.82 0 188 27 12 0 0 0 3.6671E-18 2 80231 121.27 121.27 1 0.64709 0.55282 0 83314000 52143000 31170000 1916 1398 713 733 3008;3009 3009 ALETLTGALFQRPPLIAAVK 20 1 1 Unmodified _ALETLTGALFQRPPLIAAVK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1055.6274 2 1055.12516 2108.23576 58868.23 0.65383 0.00068987 -0.027185 -2.8684E-05 0.62664 0.00066118 1055.62654846434 1064.13630333803 133.33 0.54016 133.33 133.17 133.71 0 102 20 9 0 0 0 1.3764E-05 1 80244 84.169 84.169 1 0.6247 0.52954 0 16719000 9947100 6772200 1917 1398 713 733 3010 3010 ALEYTIYNQELNETR 15 0 1 Unmodified _ALEYTIYNQELNETR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 928.9571 2 928.95488 1855.89521 63800.31 0.5723 0.00053164 0.076155 7.0745E-05 0.64845 0.00060239 929.456014201242 933.95945572897 86.007 0.64476 86.007 85.724 86.369 0 202 53 5 0 0 0 1.3163E-05 1 51590 90.614 86.44 1 0.92837 0.94135 0 15136000 7816200 7320000 1918 803 714 734 3011 3011 ALEYTIYNQELNETR 15 0 1 Unmodified _ALEYTIYNQELNETR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 933.9574 2 928.95488 1855.89521 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.764 1 85.764 85.264 86.264 0 0 0 0 0.012669 1 51559 45.077 37.876 1 1919 803 714 734 3012 3012 ALEYTIYNQELNETR 15 0 1 Unmodified _ALEYTIYNQELNETR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 933.9597 2 928.95488 1855.89521 63818.93 0.56638 0.00052614 0.25335 0.00023535 0.81973 0.00076149 929.456542195943 934.461161937685 85.276 0.55927 85.276 84.993 85.552 -7.6294E-06 218 46 6 0 0 0 3.0325E-07 3 52292 106.49 82.641 1 0.85397 0.86264 0 19787000 10215000 9572300 1920 803 714 734 3013;3014;3015 3013 ALEYTIYNQELNETR 15 0 1 Unmodified _ALEYTIYNQELNETR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 934.4609 2 928.95488 1855.89521 62519.29 0.68552 0.00063681 -0.75085 -0.00069751 -0.065338 -6.0696E-05 929.455774698602 933.959277344033 98.701 0.65419 98.701 98.373 99.027 0 188 41 7 0 0 0 0.0031794 1 55613 42.809 34.399 1 1.231 1.032 0 4096600 1838700 2257800 1921 803 714 734 3016 3016 ALEYTIYNQELNETR 15 0 1 Unmodified _ALEYTIYNQELNETR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 934.4618 2 928.95488 1855.89521 62827.7 0.57141 0.00053082 -0.64171 -0.00059612 -0.070295 -6.5301E-05 928.954744986199 933.95947280554 98.701 0.60384 98.701 98.384 98.987 0 185 35 7 0 0 0 0.0096986 2 54737 35.204 21.046 1 1.2024 0.99757 0 5299100 2398800 2900300 1922 803 714 734 3017;3018 3017 ALEYVEAK 8 1 0 Unmodified _ALEYVEAK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.7549 2 461.74765 921.480748 90263.45 0.50033 0.00023103 0.56716 0.00026189 1.0675 0.00049291 461.747539266027 465.754618974175 38.344 0.69696 38.344 38.007 38.704 0 273 59 7 0 0 0 0.0092533 2 19560 75.109 43.82 1 1.2805 1.4014 0 51911000 25407000 26504000 1923 1741 715 735 3019;3020 3020 ALEYVEAK 8 1 0 Unmodified _ALEYVEAK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.7555 2 461.74765 921.480748 88785.92 0.11513 5.3162E-05 0.81757 0.00037751 0.9327 0.00043067 461.74757827548 465.754669012485 37.503 0.62631 37.503 37.169 37.795 0 245 50 7 0 0 0 0.011407 3 19356 69.998 41.205 1 1.2481 1.4079 0 66355000 28921000 37434000 1924 1741 715 735 3021;3022;3023 3021 ALEYVEAK 8 1 0 Unmodified _ALEYVEAK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 461.748 2 461.74765 921.480748 90787.4 -0.0086025 -3.9722E-06 0.291 0.00013437 0.2824 0.0001304 461.747778379231 465.754667781431 43.472 0.90139 43.472 43.022 43.923 0 225 56 6 0 0 0 0.04634 1 19978 45.081 21.109 1 1.3786 1.1245 0 7830800 3367700 4463100 1925 1741 715 735 3024 3024 ALFEEVPELLTEAEK 15 1 0 Unmodified _ALFEEVPELLTEAEK_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06;H7C1S2 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.9578 2 859.448368 1716.88218 NaN NaN NaN 0.15942 0.00013701 NaN NaN NaN NaN 124.65 0.5033 124.65 124.38 124.89 0 0 0 0 0.00020184 1 80880 77.593 60.961 1 NaN NaN 0 10668000 0 10668000 1926 852 716 736 3025 3025 ALFPGDSEIDQLFR 14 0 1 Unmodified _ALFPGDSEIDQLFR_ 0 0 0 A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9;A0A024R8R3;Q00526;K7EJ83 A0A024RB10 A0A024RB10 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.409 2 804.406837 1606.79912 NaN NaN NaN 2.0061 0.0016137 NaN NaN NaN NaN 125.22 0.80473 125.22 124.89 125.69 -7.6294E-06 0 0 0 0.0042664 1 81209 59.265 41.401 1 NaN NaN 0 6843600 6843600 0 1927 318 717 737 3026 3026 ALFPGDSEIDQLFR 14 0 1 Unmodified _ALFPGDSEIDQLFR_ 0 0 0 A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9;A0A024R8R3;Q00526;K7EJ83 A0A024RB10 A0A024RB10 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.4113 2 804.406837 1606.79912 NaN NaN NaN 0.40317 0.00032432 NaN NaN NaN NaN 124.68 0.52998 124.68 124.44 124.97 0 0 0 0 3.5632E-06 1 82915 97.911 62.687 1 NaN NaN 0 15237000 0 15237000 1928 318 717 737 3027 3027 ALGEPITLFGEGPAER 16 0 1 Unmodified _ALGEPITLFGEGPAER_ 0 0 0 Q6IAP9;Q5T1M7;Q59EL4;O43172;B2R7V4 Q6IAP9 Q6IAP9 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.9387 2 828.933219 1655.85189 67747.5 0.59177 0.00049054 0.14451 0.00011979 0.73628 0.00061032 829.434463388688 833.937710623654 120.38 0.55762 120.38 120.04 120.6 7.6294E-06 94 24 6 0 0 0 0.00029927 2 71463 55.261 55.261 1 0.81301 0.69636 0 6058200 3324500 2733700 1929 1381 718 738 3028;3029 3028 ALGEPITLFGEGPAER 16 0 1 Unmodified _ALGEPITLFGEGPAER_ 0 0 0 Q6IAP9;Q5T1M7;Q59EL4;O43172;B2R7V4 Q6IAP9 Q6IAP9 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.4356 2 828.933219 1655.85189 67206.97 0.93312 0.00077349 -0.070338 -5.8306E-05 0.86278 0.00071519 829.434766369258 833.93701272063 120.15 0.417 120.15 119.92 120.34 0 82 18 7 0 0 0 0.0003471 2 70408 53.034 53.034 1 0.97108 0.8097 0 6440700 3309100 3131600 1930 1381 718 738 3030;3031 3031 ALGISHAK 8 1 0 Unmodified _ALGISHAK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 398.7375 2 398.73742 795.460287 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.694 1 18.694 18.194 19.194 0 0 0 0 0.038788 1 5597 58.679 15.96 1 1931 122 719 739 3032 3032 ALGISHAK 8 1 0 Unmodified _ALGISHAK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 398.7372 2 398.73742 795.460287 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.708 1 18.708 18.208 19.208 0 0 0 0 0.042109 1 5607 57.177 18.156 1 1932 122 719 739 3033 3033 ALGLDTGQQQDAQEFSK 17 1 0 Unmodified _ALGLDTGQQQDAQEFSK_ 0 0 0 B7ZKR8;B7ZKS3;Q86UV5 B7ZKR8 B7ZKR8 USP48 Ubiquitin carboxyl-terminal hydrolase 48 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.4424 2 918.442137 1834.86972 NaN NaN NaN 0.49742 0.00045685 NaN NaN NaN NaN 66.845 0.098808 66.845 66.804 66.903 0 0 0 0 0.0011511 1 39542 60.401 48.868 1 NaN NaN 0 2359100 2359100 0 1933 1112 720 740 3034 3034 ALGLFSNDIPHVVR 14 0 1 Unmodified _ALGLFSNDIPHVVR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.6241 3 513.287697 1536.84126 83487.06 0.5654 0.00029021 -0.078898 -4.0497E-05 0.4865 0.00024972 513.287620129454 516.623724416079 101.43 1.1909 101.43 100.91 102.1 0 553 93 8 0 0 0 4.9667E-05 4 62640 77.527 77.527 1 0.89926 1.001 0 78983000 43279000 35704000 1934 486 721 741 3035;3036;3037;3038 3038 ALGLFSNDIPHVVR 14 0 1 Unmodified _ALGLFSNDIPHVVR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.4335 2 769.427907 1536.84126 70872.88 0.80257 0.00061752 -0.26448 -0.00020349 0.53809 0.00041402 769.427790751049 774.43203937642 101.46 0.78194 101.46 101.06 101.84 0 246 60 6 0 0 0 0.0017792 2 62187 51.252 51.252 1 0.98414 0.98542 0 16958000 7834500 9123800 1935 486 721 741 3039;3040 3039 ALGLFSNDIPHVVR 14 0 1 Unmodified _ALGLFSNDIPHVVR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.2877 3 513.287697 1536.84126 83791.14 0.50261 0.00025799 -0.15366 -7.8874E-05 0.34895 0.00017911 513.287607082021 516.623659123966 100.27 1.0213 100.27 99.684 100.7 -7.6294E-06 576 81 9 0 0 0 2.4282E-05 4 63171 80.469 80.469 1 0.91471 1.0465 0 161100000 85355000 75744000 1936 486 721 741 3041;3042;3043;3044 3043 ALGLFSNDIPHVVR 14 0 1 Unmodified _ALGLFSNDIPHVVR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.6237 3 513.287697 1536.84126 83571.16 0.78727 0.00040409 -0.24899 -0.00012781 0.53827 0.00027629 513.287579028779 516.623636611663 112.85 0.64311 112.85 112.61 113.25 7.6294E-06 177 29 10 0 0 0 3.591E-05 2 65519 72.891 72.891 1 1.1591 0.99709 0 49835000 21659000 28176000 1937 486 721 741 3045;3046 3045 ALGLFSNDIPHVVR 14 0 1 Unmodified _ALGLFSNDIPHVVR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.9303 2 769.427907 1536.84126 70072.46 1.0148 0.0007808 -0.1193 -9.1794E-05 0.89548 0.00068901 769.427711856163 774.431998563159 112.83 0.52904 112.83 112.54 113.07 -7.6294E-06 106 24 9 0 0 0 0.00024168 2 65561 63.408 63.408 1 1.2683 1.0381 0 13270000 5802100 7468000 1938 486 721 741 3047;3048 3048 ALGLFSNDIPHVVR 14 0 1 Unmodified _ALGLFSNDIPHVVR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.6239 3 513.287697 1536.84126 84055.64 0.45284 0.00023244 -0.038003 -1.9506E-05 0.41484 0.00021293 513.287650602833 516.623730717866 112.58 0.73349 112.58 112.32 113.06 0 223 36 10 0 0 0 9.8639E-07 2 64414 97.551 97.551 1 1.2894 1.1248 0 43442000 18571000 24872000 1939 486 721 741 3049;3050 3050 ALGLFSNDIPHVVR 14 0 1 Unmodified _ALGLFSNDIPHVVR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 769.9296 2 769.427907 1536.84126 70238.35 0.83131 0.00063963 -0.086231 -6.6348E-05 0.74508 0.00057328 769.427905317791 774.431917737283 112.59 0.65786 112.59 112.17 112.83 0 180 34 9 0 0 0 0.00014072 2 64465 78.342 78.342 1 1.2009 0.97603 0 12276000 5612700 6663300 1940 486 721 741 3051;3052 3052 ALGLSTDDAYEELR 14 0 1 Unmodified _ALGLSTDDAYEELR_ 0 0 0 A0A024R363;A0A087X0F1;Q9UK61 A0A024R363;Q9UK61 A0A024R363 C3orf63;FAM208A Protein FAM208A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 781.8836 2 776.87811 1551.74167 68088.13 0.71351 0.00055431 0.13097 0.00010175 0.84448 0.00065606 776.87740777714 781.882102272651 103.62 0.49014 103.62 103.33 103.82 7.6294E-06 79 31 5 0 0 0 0.0046626 1 58948 45.077 32.501 1 1.3676 1.1463 0 4078000 2097300 1980700 1941 129;2105 722 742 3053 3053 ALGLVIR 7 0 1 Unmodified _ALGLVIR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 376.2565 2 371.252706 740.490859 104397 0.030797 1.1433E-05 -0.10924 -4.0557E-05 -0.078448 -2.9124E-05 371.252672843416 376.256713108064 73.516 0.25636 73.516 73.366 73.623 0 71 24 4 0 0 0 0.03153 1 43079 66.994 5.988 1 1.7074 1.7234 0 17693000 7432200 10261000 1942 1205 723 743 3054 3054 ALGLVTPAGVLLAGPPGCGK 20 1 0 Unmodified _ALGLVTPAGVLLAGPPGCGK_ 0 0 0 B4DLM8;O15381;B4DQJ4 B4DLM8 B4DLM8 NVL Nuclear valosin-containing protein-like ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 928.5323 2 924.524221 1847.03389 NaN NaN NaN -0.23931 -0.00022125 NaN NaN NaN NaN 121.4 0.28754 121.4 121.25 121.54 0 0 0 0 1.9529E-05 1 78438 65.179 52.171 1 NaN NaN 0 2947300 0 2947300 1943 997 724 744 3055 3055 ALGLVTPAGVLLAGPPGCGK 20 1 0 Unmodified _ALGLVTPAGVLLAGPPGCGK_ 0 0 0 B4DLM8;O15381;B4DQJ4 B4DLM8 B4DLM8 NVL Nuclear valosin-containing protein-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.5322 2 924.524221 1847.03389 66653.54 0.59528 0.00055035 0.37167 0.00034362 0.96695 0.00089397 924.524453066724 928.531587308252 120.98 0.32845 120.98 120.82 121.15 7.6294E-06 63 18 6 0 0 0 2.3818E-06 2 80046 67.456 67.456 1 1.0479 1.0603 0 13062000 5052700 8009700 1944 997 724 744 3056;3057 3057 ALGPSLPNSQPPPEVYVSLIK 21 1 0 Unmodified _ALGPSLPNSQPPPEVYVSLIK_ 0 0 0 B3KN79;Q15646 B3KN79 B3KN79 OASL 2-5-oligoadenylate synthase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1104.1116 2 1103.60954 2205.20452 58893.94 0.51444 0.00056774 0.42784 0.00047217 0.94229 0.0010399 1103.60972519108 1107.61640502008 131.71 0.40163 131.71 131.47 131.87 0 72 13 7 0 0 0 0.016428 1 79088 23.362 23.362 1 1.0399 0.81354 0 3721100 1592100 2129000 1945 911 725 745 3058 3058 ALGQNPTNAEVLK 13 1 0 Unmodified _ALGQNPTNAEVLK_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;F8VPF3;Q6IBG5;F8W1I5;A0A024RB31;B4E368;P14649 F8W1R7 F8W1R7 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.8776 2 677.869891 1353.72523 NaN NaN NaN 0.25994 0.00017621 NaN NaN NaN NaN 53.005 0.63993 53.005 52.693 53.332 0 0 0 0 1.6735E-05 1 29391 93.442 93.442 1 NaN NaN 0 119260000 0 119260000 1946 1101 726 746 3059 3059 ALGQNPTNAEVLK 13 1 0 Unmodified _ALGQNPTNAEVLK_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;F8VPF3;Q6IBG5;F8W1I5;A0A024RB31;B4E368;P14649 F8W1R7 F8W1R7 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.8768 2 677.869891 1353.72523 NaN NaN NaN -0.73315 -0.00049698 NaN NaN NaN NaN 51.54 0.89974 51.54 51.243 52.143 3.8147E-06 0 0 0 3.2767E-29 1 29160 149.94 120.86 1 NaN NaN 0 94169000 0 94169000 1947 1101 726 746 3060 3060 ALGQNPTNAEVLK 13 1 0 Unmodified _ALGQNPTNAEVLK_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;F8VPF3;Q6IBG5;F8W1I5;A0A024RB31;B4E368;P14649 F8W1R7 F8W1R7 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.8766 2 677.869891 1353.72523 NaN NaN NaN -0.72302 -0.00049011 NaN NaN NaN NaN 62.012 0.89219 62.012 61.56 62.452 0 0 0 0 0.0016175 1 31002 74.562 45.475 1 NaN NaN 0 10838000 0 10838000 1948 1101 726 746 3061 3061 ALGSAQYEDPR 11 0 1 Unmodified _ALGSAQYEDPR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.7912 2 603.791109 1205.56767 79244.89 0.39997 0.0002415 -0.6081 -0.00036717 -0.20813 -0.00012567 603.79111099831 608.79497839712 37.198 0.4472 37.198 36.949 37.397 0 121 36 5 0 0 0 0.0068404 1 16698 53.683 49.232 1 1.7179 1.4433 0 4329800 1444200 2885600 1949 2002 727 747 3062 3062 ALGSAQYEDPR 11 0 1 Unmodified _ALGSAQYEDPR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.7916 2 603.791109 1205.56767 78715.51 0.34269 0.00020691 -0.66456 -0.00040126 -0.32188 -0.00019435 603.791188295154 608.795080872253 37.372 0.56564 37.372 37.093 37.658 -3.8147E-06 153 46 6 0 0 0 0.030651 1 16323 38.567 33.784 1 1.6763 1.4619 0 4247000 1603200 2643800 1950 2002 727 747 3063 3063 ALGTEVIQLFPEK 13 1 0 Unmodified _ALGTEVIQLFPEK_ 0 0 0 O95831 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.9133 2 722.905942 1443.79733 72919.09 0.94672 0.00068439 0.29182 0.00021096 1.2385 0.00089535 722.905909007856 726.912757591198 114.04 0.66638 114.04 113.67 114.33 0 205 47 6 0 0 0 1.0221E-08 2 72266 114.86 114.86 1 1.5958 1.5629 0 22085000 7478300 14607000 1951 1431 728 748 3064;3065 3065 ALGTEVIQLFPEK 13 1 0 Unmodified _ALGTEVIQLFPEK_ 0 0 0 O95831 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.9131 2 722.905942 1443.79733 71330.02 0.89073 0.00064392 0.34721 0.000251 1.2379 0.00089492 723.408276997106 726.913115940754 125.41 0.49886 125.41 125.17 125.66 -7.6294E-06 94 17 8 0 0 0 8.0499E-06 2 75225 102.53 102.53 1 1.7212 1.3652 0 6427300 2395300 4032000 1952 1431 728 748 3066;3067 3066 ALGTEVIQLFPEK 13 1 0 Unmodified _ALGTEVIQLFPEK_ 0 0 0 O95831 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.9067 2 722.905942 1443.79733 71807.89 0.86331 0.00062409 0.29209 0.00021116 1.1554 0.00083525 722.906670497023 726.913008863046 125.22 0.52425 125.22 124.97 125.49 0 114 21 8 0 0 0 9.6148E-06 2 74207 100.55 100.55 1 1.7108 1.3959 0 6169000 2327400 3841500 1953 1431 728 748 3068;3069 3069 ALGTLVSHVTLR 12 0 1 Unmodified _ALGTLVSHVTLR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.2585 3 422.922467 1265.74557 NaN NaN NaN 0.047868 2.0244E-05 NaN NaN NaN NaN 75.642 0.47533 75.642 75.343 75.819 0 0 0 0 0.0045424 1 45608 53.034 41.821 1 NaN NaN 0 9395600 0 9395600 1954 1205 729 749 3070 3070 ALGTPNNEVWPEVESLQDYK 20 1 0 Unmodified _ALGTPNNEVWPEVESLQDYK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1145.059 2 1145.05532 2288.09609 56436.34 0.37481 0.00042918 -0.086461 -9.9002E-05 0.28835 0.00033018 1145.55686681886 1149.56374695334 112.02 0.5248 112.02 111.77 112.29 0 224 37 8 0 0 0 0.0051124 2 70523 28.632 28.632 1 1.1273 1.1292 0 26732000 10173000 16558000 1955 25 730 750 3071;3072 3072 ALGTPNNEVWPEVESLQDYK 20 1 0 Unmodified _ALGTPNNEVWPEVESLQDYK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1145.5573 2 1145.05532 2288.09609 56988.09 0.29458 0.00033731 0.10965 0.00012555 0.40423 0.00046286 1145.55719991062 1149.56363473425 111.53 0.5038 111.53 111.25 111.76 0 192 33 9 0 0 0 8.299E-07 1 71954 79.875 79.875 1 1.1332 1.1405 0 27661000 13225000 14436000 1956 25 730 750 3073 3073 ALGTPNNEVWPEVESLQDYK 20 1 0 Unmodified _ALGTPNNEVWPEVESLQDYK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1149.5641 2 1145.05532 2288.09609 56972.75 0.27552 0.00031549 0.20504 0.00023478 0.48056 0.00055027 1145.55740098793 1149.56381632402 123.28 0.65999 123.28 122.97 123.63 0 183 28 9 0 0 0 2.8877E-07 2 73632 84.859 84.859 1 1.3456 1.0657 0 18532000 8102400 10430000 1957 25 730 750 3074;3075 3075 ALGTPNNEVWPEVESLQDYK 20 1 0 Unmodified _ALGTPNNEVWPEVESLQDYK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1149.5638 2 1145.05532 2288.09609 57044.71 0.39245 0.00044938 -0.17464 -0.00019998 0.21781 0.0002494 1145.55688488301 1149.56350428132 123.12 0.62794 123.12 122.8 123.43 7.6294E-06 200 29 10 0 0 0 0.00011987 2 72596 42.682 42.682 1 1.4006 1.125 0 15505000 6558200 8946700 1958 25 730 750 3076;3077 3077 ALGVLAQLIWSR 12 0 1 Unmodified _ALGVLAQLIWSR_ 0 0 0 B4DJV2;A0A024RB75;O75390;H0YIC4;Q0QEL2;A0A0C4DGI3;B3KTN4 B4DJV2 B4DJV2 CS Citrate synthase;Citrate synthase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.4051 2 663.898254 1325.78196 NaN NaN NaN 0.056574 3.7559E-05 NaN NaN NaN NaN 127.16 0.46916 127.16 126.94 127.41 7.6294E-06 0 0 0 0.0073367 1 84763 58.699 27.625 1 NaN NaN 0 1752900 0 1752900 1959 326 731 751 3078 3078 ALIAAQLDNAIEK 13 1 0 Unmodified _ALIAAQLDNAIEK_ 0 0 0 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.3854 2 685.387916 1368.76128 72731.35 1.1111 0.00076152 -0.37991 -0.00026038 0.73117 0.00050114 685.38754534813 689.394875709033 90.747 0.8793 90.747 90.287 91.166 0 382 73 8 0 0 0 1.5567E-19 2 54654 149.23 112.04 1 0.94778 1.074 0 155690000 82087000 73606000 1960 2016 732 752 3079;3080 3080 ALIAAQLDNAIEK 13 1 0 Unmodified _ALIAAQLDNAIEK_ 0 0 0 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.3881 2 685.387916 1368.76128 72969.02 0.67112 0.00045998 -0.47082 -0.0003227 0.2003 0.00013728 685.387495702534 689.394889764393 89.804 0.81143 89.804 89.407 90.218 0 396 69 8 0 0 0 7.9098E-14 2 55277 134.57 98.622 1 0.92379 1.0559 0 158070000 87923000 70149000 1961 2016 732 752 3081;3082 3082 ALIAAQLDNAIEK 13 1 0 Unmodified _ALIAAQLDNAIEK_ 0 0 0 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.3951 2 685.387916 1368.76128 72540.3 0.589 0.00040369 -0.084477 -5.79E-05 0.50452 0.00034579 685.387774890696 689.394898037329 103.98 0.91765 103.98 103.63 104.55 -7.6294E-06 362 61 8 0 0 0 1.8589E-13 2 59183 130.01 92.815 1 1.235 1.0031 0 27793000 12583000 15210000 1962 2016 732 752 3083;3084 3084 ALIAAQLDNAIEK 13 1 0 Unmodified _ALIAAQLDNAIEK_ 0 0 0 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.3886 2 685.387916 1368.76128 73601.45 0.38075 0.00026096 0.20626 0.00014137 0.58701 0.00040233 685.388058140351 689.395075461921 103.8 0.8977 103.8 103.41 104.3 0 364 60 8 0 0 0 0.00021073 2 58039 69.979 34.035 1 1.24 1.0257 0 32868000 14813000 18054000 1963 2016 732 752 3085;3086 3086 ALIAAQYSGAQVR 13 0 1 Unmodified _ALIAAQYSGAQVR_ 0 0 0 Q53YD7;P26641;B4DUK7;Q2F838;B4DSR4 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3771 2 674.372601 1346.73065 75364.43 0.57995 0.0003911 0.64617 0.00043576 1.2261 0.00082686 674.372968167991 679.377031056315 63.097 0.90278 63.097 62.709 63.611 3.8147E-06 413 87 7 0 0 0 8.9529E-06 2 36122 121.83 39.573 1 2.2437 2.494 0 74143000 22415000 51728000 1964 1522 733 753 3087;3088 3087 ALIAAQYSGAQVR 13 0 1 Unmodified _ALIAAQYSGAQVR_ 0 0 0 Q53YD7;P26641;B4DUK7;Q2F838;B4DSR4 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.378 2 674.372601 1346.73065 73932.25 0.53796 0.00036278 0.43299 0.000292 0.97095 0.00065478 674.372613772906 679.377014316239 62.073 0.78522 62.073 61.78 62.565 -3.8147E-06 360 72 7 0 0 0 0.00013415 2 36250 97.456 34.633 1 2.3179 2.6889 0 65116000 20591000 44525000 1965 1522 733 753 3089;3090 3089 ALIAGGGAPEIELALR 16 0 1 Unmodified _ALIAGGGAPEIELALR_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2F4;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.9526 2 775.948672 1549.88279 71169.87 0.97714 0.00075821 -0.27892 -0.00021643 0.69822 0.00054179 775.948605838827 780.952716600105 114.05 0.47443 114.05 113.83 114.3 0 163 34 6 0 0 0 0.00015541 1 72204 72.496 43.593 1 2.8412 2.9375 0 20222000 5024100 15198000 1966 721 734 754 3091 3091 ALIAGGGAPEIELALR 16 0 1 Unmodified _ALIAGGGAPEIELALR_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2F4;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.9527 2 775.948672 1549.88279 70500.73 0.65996 0.0005121 -0.019027 -1.4764E-05 0.64093 0.00049733 775.948642774006 780.95288019774 113.48 0.51135 113.48 113.23 113.74 0 153 35 6 0 0 0 0.00015532 1 73531 72.29 46.59 1 2.8385 3.0582 0 25910000 5851900 20058000 1967 721 734 754 3092 3092 ALIAGGGAPEIELALR 16 0 1 Unmodified _ALIAGGGAPEIELALR_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2F4;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.9268 2 775.948672 1549.88279 70807.77 0.92539 0.00071806 -0.22143 -0.00017182 0.70397 0.00054624 775.948540596701 780.952515078238 125.57 0.53813 125.57 125.22 125.76 0 68 19 7 0 0 0 0.026745 1 75421 40.475 40.475 1 1.6041 1.3798 0 6922000 2489000 4432900 1968 721 734 754 3093 3093 ALIAGGGAPEIELALR 16 0 1 Unmodified _ALIAGGGAPEIELALR_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2F4;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.9495 2 775.948672 1549.88279 70611.77 0.83826 0.00065045 -0.12433 -9.6476E-05 0.71393 0.00055397 775.948622922829 780.952712392095 125.39 0.40939 125.39 125.15 125.56 -7.6294E-06 76 16 7 0 0 0 3.3718E-06 1 74398 89.403 83.171 1 1.4245 1.1846 0 7458100 3165900 4292200 1969 721 734 754 3094 3094 ALIEMEK 7 1 0 Oxidation (M) _ALIEM(ox)EK_ ALIEM(1)EK ALIEM(57.28)EK 0 1 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367;C9JYS8 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.2227 2 425.222954 848.431355 94202.83 0.070407 2.9938E-05 0.25356 0.00010782 0.32397 0.00013776 425.222724246808 429.230202532329 25.901 0.53249 25.901 25.613 26.145 1.9073E-06 96 27 4 0 0 0 0.021895 1 11348 57.281 7.9225 1 2.047 2.2009 0 38836000 11986000 26849000 1970 573 735 755 3095 3095 425 ALIETYQK 8 1 0 Unmodified _ALIETYQK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.2756 2 483.26875 964.522947 89688.51 0.087719 4.2392E-05 0.12216 5.9038E-05 0.20988 0.00010143 483.268773147474 487.275686199208 45.776 0.55673 45.776 45.423 45.98 0 145 42 6 0 0 0 0.032325 1 21949 50.703 17.153 1 1.4468 1.1854 0 2465800 1039300 1426500 1971 1928 736 756 3096 3096 ALIETYQK 8 1 0 Unmodified _ALIETYQK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.2757 2 483.26875 964.522947 90384.15 0.29963 0.0001448 -0.12703 -6.1387E-05 0.1726 8.3412E-05 483.268561195313 487.275622187495 45.844 0.50686 45.844 45.546 46.053 0 117 32 6 0 0 0 0.056914 1 21459 41.227 19.096 1 1.375 1.0727 0 2112400 785930 1326500 1972 1928 736 756 3097 3097 ALIGQEGDPDLK 12 1 0 Unmodified _ALIGQEGDPDLK_ 0 0 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.3389 2 628.330067 1254.64558 76830.03 0.49774 0.00031274 -0.28293 -0.00017778 0.21481 0.00013497 628.329625237102 632.337464884804 59.617 0.36809 59.617 59.45 59.819 0 94 28 4 0 0 0 7.084E-18 2 33963 143.04 143.04 1 0.75094 0.80772 0 32944000 16624000 16319000 1973 1699 737 757 3098;3099 3099 ALIGQEGDPDLK 12 1 0 Unmodified _ALIGQEGDPDLK_ 0 0 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.3383 2 628.330067 1254.64558 NaN NaN NaN 0.55008 0.00034563 NaN NaN NaN NaN 58.491 0.31233 58.491 58.329 58.641 0 0 0 0 7.6036E-07 1 33991 105.52 60.542 1 NaN NaN 0 22044000 0 22044000 1974 1699 737 757 3100 3100 ALILSPTR 8 0 1 Unmodified _ALILSPTR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.7742 2 435.774003 869.533452 91095.3 -0.085002 -3.7042E-05 0.33576 0.00014631 0.25075 0.00010927 435.774067247166 440.778222709144 58.74 0.59188 58.74 58.504 59.096 3.8147E-06 119 47 4 0 0 0 0.019981 1 33330 58.782 0 1 1.019 1.0357 0 27618000 13905000 13713000 1975 1933 738 758 3101 3101 ALILSPTR 8 0 1 Unmodified _ALILSPTR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.7739 2 435.774003 869.533452 92018.41 -0.18047 -7.8645E-05 0.24758 0.00010789 0.067105 2.9243E-05 435.774045841732 440.778279898183 59.902 0.59505 59.902 59.699 60.295 0 163 50 5 0 0 0 0.011764 2 34078 69.176 0 1 0.88095 0.99106 0 95864000 46774000 49090000 1976 1933 738 758 3102;3103 3102 ALILSPTR 8 0 1 Unmodified _ALILSPTR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.7734 2 435.774003 869.533452 92906.02 0.15443 6.7296E-05 0.2124 9.2557E-05 0.36683 0.00015985 435.773953224461 440.778199649935 57.722 0.61793 57.722 57.339 57.957 -3.8147E-06 140 50 5 0 0 0 0.014311 1 33405 63.301 0 1 0.96043 0.97738 0 20507000 10288000 10219000 1977 1933 738 758 3104 3104 ALILSPTR 8 0 1 Unmodified _ALILSPTR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.7744 2 435.774003 869.533452 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.611 1 58.611 58.111 59.111 0 0 0 0 0.0037942 1 34093 94.407 0 1 1978 1933 738 758 3105 3105 ALIPLALEGTDVGQTK 16 1 0 Unmodified _ALIPLALEGTDVGQTK_ 0 0 0 Q9H3U1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.4654 2 813.45907 1624.90359 69819.96 0.61798 0.00050271 -0.32614 -0.0002653 0.29184 0.0002374 813.458768292331 817.465681777397 110.85 0.3242 110.85 110.66 110.99 0 105 24 6 0 0 0 2.5199E-05 1 71389 85.672 85.672 1 1.9277 1.9549 0 12892000 4724700 8167400 1979 2029 739 759 3106 3106 ALIVEPSR 8 0 1 Unmodified _ALIVEPSR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.7638 2 442.763635 883.512717 NaN NaN NaN 0.71173 0.00031513 NaN NaN NaN NaN 46.605 0.63782 46.605 46.268 46.906 0 0 0 0 0.010952 1 25655 76.035 28.292 1 NaN NaN 0 42911000 42911000 0 1980 452 740 760 3107 3107 ALIVLAHSER 10 0 1 Unmodified _ALIVLAHSER_ 0 0 0 B4DLR8;Q3B792;H3BRK3;P15559;Q53G81 B4DLR8 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 373.5565 3 370.220624 1107.64004 97859.08 0.37083 0.00013729 -0.22348 -8.2738E-05 0.14734 5.455E-05 370.554879064585 373.556588958765 48.878 0.54986 48.878 48.531 49.081 0 108 41 5 0 0 0 0.0089401 1 26634 39.785 21.113 1 4.3254 4.7806 0 57393000 7324100 50069000 1981 1000 741 761 3108 3108 ALIVLAHSER 10 0 1 Unmodified _ALIVLAHSER_ 0 0 0 B4DLR8;Q3B792;H3BRK3;P15559;Q53G81 B4DLR8 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.8315 2 554.827298 1107.64004 NaN NaN NaN 0.13931 7.7292E-05 NaN NaN NaN NaN 48.872 0.37231 48.872 48.521 48.894 0 0 0 0 0.008091 1 26698 65.305 23.196 1 NaN NaN 0 26492000 0 26492000 1982 1000 741 761 3109 3109 ALIVLAHSER 10 0 1 Unmodified _ALIVLAHSER_ 0 0 0 B4DLR8;Q3B792;H3BRK3;P15559;Q53G81 B4DLR8 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.3337 2 554.827298 1107.64004 82706.09 0.61114 0.00033908 0.43263 0.00024004 1.0438 0.00057911 554.827483301771 559.83157163987 46.864 0.55286 46.864 46.674 47.226 0 141 46 5 0 0 0 7.8785E-05 3 25965 98.033 58.032 1 5.3214 5.5643 0 22600000 3129700 19470000 1983 1000 741 761 3110;3111;3112 3112 ALIVLAHSER 10 0 1 Unmodified _ALIVLAHSER_ 0 0 0 B4DLR8;Q3B792;H3BRK3;P15559;Q53G81 B4DLR8 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.5563 3 370.220624 1107.64004 98715.15 0.18669 6.9118E-05 -0.21827 -8.0809E-05 -0.031579 -1.1691E-05 370.220592357648 373.55656902832 46.849 0.62959 46.849 46.639 47.269 0 227 55 6 0 0 0 0.0037304 2 25902 48.998 39.217 1 4.5988 5.0218 0 38693000 7596500 31096000 1984 1000 741 761 3113;3114 3113 ALIVVPYAEGVIPDEAK 17 1 0 Unmodified _ALIVVPYAEGVIPDEAK_ 0 0 0 Q05519;Q05BU6;Q6PJY9;Q6PKC9;Q5T760;Q6PJB9 Q05519 Q05519 SRSF11;SFRS11 Serine/arginine-rich splicing factor 11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.005 2 892.495652 1782.97675 NaN NaN NaN 0.085135 7.5982E-05 NaN NaN NaN NaN 118.02 0.30411 118.02 117.87 118.18 0 0 0 0 0.038322 1 75664 35.006 4.4563 1 NaN NaN 0 4793600 0 4793600 1985 1684 742 762 3115 3115 ALIVVPYAEGVIPDEAK 17 1 0 Unmodified _ALIVVPYAEGVIPDEAK_ 0 0 0 Q05519;Q05BU6;Q6PJY9;Q6PKC9;Q5T760;Q6PJB9 Q05519 Q05519 SRSF11;SFRS11 Serine/arginine-rich splicing factor 11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.0021 2 892.495652 1782.97675 NaN NaN NaN -0.30157 -0.00026915 NaN NaN NaN NaN 117.6 0.28391 117.6 117.44 117.73 7.6294E-06 0 0 0 0.00061601 1 77108 64.199 31.701 1 NaN NaN 0 5077500 0 5077500 1986 1684 742 762 3116 3116 ALIVVPYAEGVIPDEAK 17 1 0 Unmodified _ALIVVPYAEGVIPDEAK_ 0 0 0 Q05519;Q05BU6;Q6PJY9;Q6PKC9;Q5T760;Q6PJB9 Q05519 Q05519 SRSF11;SFRS11 Serine/arginine-rich splicing factor 11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.4969 2 892.495652 1782.97675 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.63 1 117.63 117.13 118.13 7.6294E-06 0 0 0 0.0055563 1 77196 50.207 33.265 1 1987 1684 742 762 3117 3117 ALIVVPYAEGVIPDEAK 17 1 0 Unmodified _ALIVVPYAEGVIPDEAK_ 0 0 0 Q05519;Q05BU6;Q6PJY9;Q6PKC9;Q5T760;Q6PJB9 Q05519 Q05519 SRSF11;SFRS11 Serine/arginine-rich splicing factor 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 892.9984 2 892.495652 1782.97675 65251.49 0.54224 0.00048394 -0.52054 -0.00046458 0.021694 1.9362E-05 892.49585616247 896.502876251215 130.02 0.3679 130.02 129.86 130.22 -1.5259E-05 79 17 7 0 0 0 0.053368 1 78762 22.055 22.055 1 0.4795 0.38065 0 2993400 1949800 1043500 1988 1684 742 762 3118 3118 ALIVVPYAEGVIPDEAK 17 1 0 Unmodified _ALIVVPYAEGVIPDEAK_ 0 0 0 Q05519;Q05BU6;Q6PJY9;Q6PKC9;Q5T760;Q6PJB9 Q05519 Q05519 SRSF11;SFRS11 Serine/arginine-rich splicing factor 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 892.4967 2 892.495652 1782.97675 66462.8 0.64438 0.0005751 0.42566 0.0003799 1.07 0.000955 892.496279188358 896.503292806103 129.84 0.34738 129.84 129.7 130.05 0 48 11 6 0 0 0 0.00015155 1 77774 54.7 54.7 1 0.50839 0.4003 0 3871800 2478100 1393700 1989 1684 742 762 3119 3119 ALIVVQQGMTPSAK 14 1 0 Oxidation (M) _ALIVVQQGM(ox)TPSAK_ ALIVVQQGM(1)TPSAK ALIVVQQGM(84.17)TPSAK 0 1 0 A0A087WVZ9;E5KT65;P19388;B4DJ89;A0A087WWX0;A0A0A0MQR7;A0A087WVN5 A0A087WVZ9 A0A087WVZ9 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.8326 2 729.902876 1457.7912 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.727 1 59.727 59.227 60.227 3.8147E-06 0 0 0 0.00018912 1 34055 84.17 46.694 1 1990 423 743 763 3120 3120 311 ALIVVQQGMTPSAK 14 1 0 Oxidation (M) _ALIVVQQGM(ox)TPSAK_ ALIVVQQGM(1)TPSAK ALIVVQQGM(63.07)TPSAK 0 1 0 A0A087WVZ9;E5KT65;P19388;B4DJ89;A0A087WWX0;A0A0A0MQR7;A0A087WVN5 A0A087WVZ9 A0A087WVZ9 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.3052 2 729.902876 1457.7912 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.737 1 59.737 59.237 60.237 0 0 0 0 0.0011206 1 34061 63.073 42.77 1 1991 423 743 763 3121 3121 311 ALIVVQQGMTPSAK 14 1 0 Oxidation (M) _ALIVVQQGM(ox)TPSAK_ ALIVVQQGM(1)TPSAK ALIVVQQGM(76.28)TPSAK 0 1 0 A0A087WVZ9;E5KT65;P19388;B4DJ89;A0A087WWX0;A0A0A0MQR7;A0A087WVN5 A0A087WVZ9 A0A087WVZ9 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.9031 2 729.902876 1457.7912 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.82 1 59.82 59.32 60.32 0 0 0 0 0.00050812 1 34119 76.282 53.641 1 1992 423 743 763 3122 3122 311 ALIVVQQGMTPSAK 14 1 0 Oxidation (M) _ALIVVQQGM(ox)TPSAK_ ALIVVQQGM(1)TPSAK ALIVVQQGM(54.2)TPSAK 0 1 0 A0A087WVZ9;E5KT65;P19388;B4DJ89;A0A087WWX0;A0A0A0MQR7;A0A087WVN5 A0A087WVZ9 A0A087WVZ9 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.9095 2 729.902876 1457.7912 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.515 1 58.515 58.015 59.015 3.8147E-06 0 0 0 0.0031439 1 34034 54.198 24.724 1 1993 423 743 763 3123 3123 311 ALLAVIGADSVTLK 14 1 0 Unmodified _ALLAVIGADSVTLK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.9166 2 685.91631 1369.81807 73885.01 0.90877 0.00062334 -0.23366 -0.00016027 0.67511 0.00046307 685.916152257382 689.923208298636 113.63 0.74275 113.63 113.3 114.04 0 280 54 8 0 0 0 4.5577E-15 2 71931 136.48 136.48 1 0.91018 0.98461 0 36181000 18451000 17730000 1994 925 744 764 3124;3125 3125 ALLAVIGADSVTLK 14 1 0 Unmodified _ALLAVIGADSVTLK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.9171 2 685.91631 1369.81807 73758.52 0.68363 0.00046892 -0.14812 -0.0001016 0.53552 0.00036732 685.916128021306 689.923236119728 113 0.88519 113 112.71 113.59 0 283 60 8 0 0 0 4.152E-10 2 73196 123.8 108.47 1 0.97423 1.0765 0 44705000 22457000 22248000 1995 925 744 764 3126;3127 3127 ALLAVIGADSVTLK 14 1 0 Unmodified _ALLAVIGADSVTLK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.9171 2 685.91631 1369.81807 74035.42 0.71697 0.00049178 0.049348 3.3849E-05 0.76631 0.00052563 685.916214917374 689.923359771465 124.93 0.67403 124.93 124.7 125.38 0 166 28 9 0 0 0 3.1639E-06 2 74877 103.34 99.487 1 1.5889 1.257 0 18348000 6868600 11479000 1996 925 744 764 3128;3129 3129 ALLAVIGADSVTLK 14 1 0 Unmodified _ALLAVIGADSVTLK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.4254 2 685.91631 1369.81807 74184.05 0.72183 0.00049512 0.21661 0.00014857 0.93844 0.00064369 685.916394377451 689.923522044135 124.78 0.61919 124.78 124.51 125.13 0 159 29 8 0 0 0 2.4053E-09 2 73804 116.55 116.55 1 1.5011 1.2163 0 24307000 9661100 14646000 1997 925 744 764 3130;3131 3130 ALLDASETTSTR 12 0 1 Unmodified _ALLDASETTSTR_ 0 0 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8292 2 632.822606 1263.63066 76147.41 0.87042 0.00055082 0.14171 8.9677E-05 1.0121 0.0006405 632.822838772354 637.826767575182 45.133 0.55707 45.133 44.862 45.419 0 167 49 5 0 0 0 2.3097E-05 2 24184 101.95 85.203 1 1.6356 1.6756 0 35949000 13317000 22632000 1998 1731;1802 745 765 3132;3133 3132 ALLDASETTSTR 12 0 1 Unmodified _ALLDASETTSTR_ 0 0 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.8267 2 632.822606 1263.63066 76207.66 0.76941 0.0004869 0.0016673 1.0551E-06 0.77107 0.00048795 632.822510738138 637.826627042713 44.244 0.50264 44.244 44.098 44.601 0 173 44 6 0 0 0 1.3553E-05 2 24145 106.4 82.015 1 1.8042 2.0454 0 48227000 18623000 29604000 1999 1731;1802 745 765 3134;3135 3135 ALLDASETTSTR 12 0 1 Unmodified _ALLDASETTSTR_ 0 0 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.8297 2 632.822606 1263.63066 74674.67 0.23043 0.00014582 0.93486 0.0005916 1.1653 0.00073743 633.3245625539 637.827617637758 51.756 0.58085 51.756 51.527 52.108 0 144 47 4 0 0 0 0.047262 1 25554 33.088 13.302 1 1.1757 0.98227 0 3350000 1689400 1660600 2000 1731;1802 745 765 3136 3136 ALLDLCAAPGGWLQVAAK 18 1 0 Unmodified _ALLDLCAAPGGWLQVAAK_ 0 0 0 Q8IY81;J3KS36;J3QSE2 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.0029 2 927.500746 1852.98694 62261.49 0.84117 0.00078019 -0.36423 -0.00033782 0.47694 0.00044236 928.001998441736 931.507916283626 125.62 0.42088 125.62 125.4 125.82 -7.6294E-06 136 28 9 0 0 0 9.4323E-06 1 83675 115.29 115.29 1 0.80217 0.81754 0 17052000 8661800 8390100 2001 1898 746 766 3137 3137 ALLDYGVTADAR 12 0 1 Unmodified _ALLDYGVTADAR_ 0 0 0 Q00653;A0A1P8C958 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8347 2 632.830234 1263.64592 NaN NaN NaN -0.20754 -0.00013134 NaN NaN NaN NaN 78.443 0.4962 78.443 78.189 78.685 7.6294E-06 0 0 0 0.0018756 1 46405 73.067 27.906 1 NaN NaN 0 5840400 0 5840400 2002 1674 747 767 3138 3138 ALLDYGVTADAR 12 0 1 Unmodified _ALLDYGVTADAR_ 0 0 0 Q00653;A0A1P8C958 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.835 2 632.830234 1263.64592 NaN NaN NaN -0.13495 -8.5398E-05 NaN NaN NaN NaN 77.464 0.44691 77.464 77.262 77.709 0 0 0 0 0.00019656 1 46876 91.549 36.486 1 NaN NaN 0 11090000 0 11090000 2003 1674 747 767 3139 3139 ALLEAGALPNAPNSYGR 17 0 1 Unmodified _ALLEAGALPNAPNSYGR_ 0 0 0 J3QRG6;K7PML8;P42771;D1LYX3;R9S252;Q2MJK0;Q208B5;G3XAG3 J3QRG6 J3QRG6 CDKN2A;p16ink4a Cyclin-dependent kinase inhibitor 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.9569 2 857.449568 1712.88458 66791.72 0.67608 0.0005797 -0.14999 -0.00012861 0.52609 0.0004511 857.44912096543 862.453418663629 88.325 0.58765 88.325 88.078 88.665 0 146 44 5 0 0 0 0.00017746 1 53172 69.846 49.006 1 2.2315 2.2805 0 31325000 10162000 21163000 2004 1339 748 768 3140 3140 ALLEAGALPNAPNSYGR 17 0 1 Unmodified _ALLEAGALPNAPNSYGR_ 0 0 0 J3QRG6;K7PML8;P42771;D1LYX3;R9S252;Q2MJK0;Q208B5;G3XAG3 J3QRG6 J3QRG6 CDKN2A;p16ink4a Cyclin-dependent kinase inhibitor 2A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.4548 2 857.449568 1712.88458 NaN NaN NaN 0.4267 0.00036587 NaN NaN NaN NaN 87.522 0.52801 87.522 87.277 87.805 0 0 0 0 3.8252E-10 1 53846 105.03 72.966 1 NaN NaN 0 17643000 0 17643000 2005 1339 748 768 3141 3141 ALLEAGALPNAPNSYGR 17 0 1 Unmodified _ALLEAGALPNAPNSYGR_ 0 0 0 J3QRG6;K7PML8;P42771;D1LYX3;R9S252;Q2MJK0;Q208B5;G3XAG3 J3QRG6 J3QRG6 CDKN2A;p16ink4a Cyclin-dependent kinase inhibitor 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 857.4504 2 857.449568 1712.88458 66859.61 0.41808 0.00035848 0.063506 5.4453E-05 0.48158 0.00041293 857.950980164462 862.955422716318 101.03 0.49424 101.03 100.75 101.25 7.6294E-06 129 33 5 0 0 0 0.012656 1 57252 30.059 30.059 1 1.4487 1.2223 0 4753500 1516900 3236600 2006 1339 748 768 3142 3142 ALLEAGALPNAPNSYGR 17 0 1 Unmodified _ALLEAGALPNAPNSYGR_ 0 0 0 J3QRG6;K7PML8;P42771;D1LYX3;R9S252;Q2MJK0;Q208B5;G3XAG3 J3QRG6 J3QRG6 CDKN2A;p16ink4a Cyclin-dependent kinase inhibitor 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 857.4513 2 857.449568 1712.88458 66205.01 0.45641 0.00039135 0.26562 0.00022775 0.72203 0.0006191 857.951131489746 862.453907565228 100.9 0.47366 100.9 100.67 101.15 0 136 33 5 0 0 0 0.016352 2 56320 29.689 29.689 1 1.5325 1.3313 0 4297000 1861200 2435800 2007 1339 748 768 3143;3144 3144 ALLELQLEPEELYQTFQR 18 0 1 Unmodified _ALLELQLEPEELYQTFQR_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1115.5844 2 1110.58098 2219.1474 57853.5 0.18969 0.00021067 0.31849 0.00035371 0.50818 0.00056437 1111.08266059624 1116.08684696108 131.65 0.53716 131.65 131.35 131.89 0 241 34 10 0 0 0 6.9817E-12 2 85780 107.37 94.989 1 3.1739 3.55 0 88092000 21615000 66477000 2008 1478 749 769 3145;3146 3145 ALLELQLEPEELYQTFQR 18 0 1 Unmodified _ALLELQLEPEELYQTFQR_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1110.5803 2 1110.58098 2219.1474 57751.37 0.61371 0.00068157 -0.0066786 -7.4171E-06 0.60703 0.00067415 1111.0826027019 1116.08648174591 131.24 0.63553 131.24 130.91 131.55 0 316 48 12 0 0 0 1.2103E-07 1 87662 87.498 87.498 1 3.3552 3.8273 0 141060000 37841000 103220000 2009 1478 749 769 3147 3147 ALLETASPR 9 0 1 Unmodified _ALLETASPR_ 0 0 0 H3BTR4;B3KPB2;Q96BT3;H3BUW2;A8K662;H3BQJ0;I3L4F8;H3BMP6;H3BQS6;H3BN05;H3BTS2 H3BTR4 H3BTR4 CENPT Centromere protein T MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2722 2 479.271824 956.529095 89571.1 0.23075 0.00011059 -0.32699 -0.00015672 -0.096239 -4.6124E-05 479.271900373193 484.275486113288 40.563 0.46287 40.563 40.292 40.755 0 103 36 5 0 0 0 0.0019479 1 21679 78.77 40.637 1 1.0427 1.1255 0 26444000 11749000 14695000 2010 920 750 770 3148 3148 ALLETASPR 9 0 1 Unmodified _ALLETASPR_ 0 0 0 H3BTR4;B3KPB2;Q96BT3;H3BUW2;A8K662;H3BQJ0;I3L4F8;H3BMP6;H3BQS6;H3BN05;H3BTS2 H3BTR4 H3BTR4 CENPT Centromere protein T MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.2759 2 479.271824 956.529095 87061.44 -0.019799 -9.4892E-06 -1.3551 -0.00064947 -1.3749 -0.00065896 479.271761026915 484.275879150455 47.205 0.59838 47.205 46.979 47.577 0 168 47 5 0 0 0 0.0091583 1 22888 60.436 21.645 1 1.5318 1.3268 0 1979400 728500 1250900 2011 920 750 770 3149 3149 ALLEVVQSGGK 11 1 0 Unmodified _ALLEVVQSGGK_ 0 0 0 Q05DH1;A0A0K0K1K4;O14818;B0YJ74;A0A087WYS6;Q8TAA3 Q05DH1 Q05DH1 PSMA7;PSMA8 Proteasome subunit alpha type;Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.8267 2 550.819138 1099.62372 NaN NaN NaN -0.18413 -0.00010142 NaN NaN NaN NaN 67.358 0.52928 67.358 67.054 67.583 0 0 0 0 0.0019655 1 38949 79.148 47.214 1 NaN NaN 0 8388900 0 8388900 2012 539 751 771 3150 3150 ALLFIPR 7 0 1 Unmodified _ALLFIPR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.2685 2 415.268356 828.522159 92600.05 0.29145 0.00012103 -0.023476 -9.7487E-06 0.26797 0.00011128 415.268227019625 420.27238048385 97.469 1.3315 97.469 96.857 98.188 0 531 114 7 0 0 0 0.025889 3 59669 88.627 16.632 1 2.0957 2.4793 0 308620000 96700000 211920000 2013 379 752 772 3151;3152;3153 3153 ALLFIPR 7 0 1 Unmodified _ALLFIPR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.2682 2 415.268356 828.522159 92480.31 0.31605 0.00013124 -0.075303 -3.1271E-05 0.24075 9.9974E-05 415.268195729303 420.272345229925 96.335 1.3891 96.335 95.771 97.16 -7.6294E-06 594 117 7 0 0 0 0.014977 1 60302 99.511 16.282 1 2.1541 2.4918 0 268510000 86977000 181540000 2014 379 752 772 3154 3154 ALLFVPR 7 0 1 Unmodified _ALLFVPR_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.2602 2 408.260531 814.506509 101803.1 0.2973 0.00012138 0.57935 0.00023653 0.87666 0.0003579 408.260556901288 413.264857336749 87.152 0.27267 87.152 87.037 87.31 0 97 23 6 0 0 0 0.019831 2 52588 94.669 0 1 3.4112 3.7486 0 54137000 13690000 40447000 2015 1348 753 773 3155;3156 3156 ALLFVPR 7 0 1 Unmodified _ALLFVPR_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.2648 2 408.260531 814.506509 100892.6 0.26302 0.00010738 0.51992 0.00021226 0.78294 0.00031964 408.260553643353 413.264802387361 85.995 0.22655 85.995 85.892 86.119 0 78 17 7 0 0 0 0.040059 1 52975 59.641 0 1 2.9745 3.4039 0 86446000 19703000 66743000 2016 1348 753 773 3157 3157 ALLGGNVR 8 0 1 Unmodified _ALLGGNVR_ 0 0 0 Q8TAF6;O60488;B4DH39;H0Y9A0 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2429 2 400.24287 798.471186 95834.31 -0.06986 -2.7961E-05 0.36081 0.00014441 0.29095 0.00011645 400.242926880444 405.246930189213 37.987 0.41475 37.987 37.807 38.222 0 83 31 4 0 0 0 0.038017 1 19914 48.115 11.559 1 1.2093 1.2742 0 23266000 9201600 14064000 2017 1394 754 774 3158 3158 ALLGSVK 7 1 0 Unmodified _ALLGSVK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2;K7EP67;K7EJ74 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 348.2307 2 344.223614 686.432676 NaN NaN NaN -0.077244 -2.6589E-05 NaN NaN NaN NaN 39.101 0.60137 39.101 38.748 39.35 0 0 0 0 0.04358 1 20564 61.494 24.938 1 NaN NaN 0 30919000 0 30919000 2018 794 755 775 3159 3159 ALLGSVK 7 1 0 Unmodified _ALLGSVK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2;K7EP67;K7EJ74 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.2235 2 344.223614 686.432676 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.11 1 39.11 38.61 39.61 0 0 0 0 0.02938 1 20661 74.415 12.418 1 2019 794 755 775 3160 3160 ALLHQLESLAK 11 1 0 Unmodified _ALLHQLESLAK_ 0 0 0 A0A024R784;O15164;B4DYZ9 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.8677 2 611.861338 1221.70812 81624.3 0.29182 0.00017855 -0.35893 -0.00021961 -0.067109 -4.1062E-05 611.861029902302 615.868317818216 92.185 0.31738 92.185 92.042 92.36 0 43 15 4 0 0 0 0.02814 1 50485 39.848 39.848 1 1.3073 1.1337 0 1354000 464000 890010 2020 217 756 776 3161 3161 ALLLAQWAWQEGSVTR 16 0 1 Unmodified _ALLLAQWAWQEGSVTR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 915.4924 2 914.98886 1827.96317 66622.38 0.51835 0.00047428 0.29743 0.00027214 0.81578 0.00074643 915.49187370841 920.494048149768 121.04 0.45202 121.04 120.79 121.24 0 142 30 7 0 0 0 9.584E-05 1 78057 79.82 79.82 1 0.86877 0.90236 0 10424000 5783000 4640700 2021 1698 757 777 3162 3162 ALLLAQWAWQEGSVTR 16 0 1 Unmodified _ALLLAQWAWQEGSVTR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 914.9896 2 914.98886 1827.96317 64138.14 0.80263 0.00073439 -0.11587 -0.00010602 0.68675 0.00062837 914.988645060015 919.992704179575 133.34 0.4852 133.34 133.08 133.57 0 115 21 7 0 0 0 1.2655E-06 2 81162 96.103 96.103 1 1.1226 0.96575 0 7590000 3685000 3905000 2022 1698 757 777 3163;3164 3164 ALLLAQWAWQEGSVTR 16 0 1 Unmodified _ALLLAQWAWQEGSVTR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 919.9954 2 914.98886 1827.96317 63792.91 0.97386 0.00089107 0.0018767 1.7171E-06 0.97573 0.00089278 915.490900101647 920.494367525188 133.03 0.42972 133.03 132.85 133.28 0 110 19 7 0 0 0 0.00015275 2 79999 66.498 66.498 1 1.3558 1.1284 0 7219000 3295200 3923800 2023 1698 757 777 3165;3166 3165 ALLLSHQFK 9 1 0 Unmodified _ALLLSHQFK_ 0 0 0 H0Y4R5;Q5SNT2 H0Y4R5 H0Y4R5 TMEM201 Transmembrane protein 201 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.8143 2 528.813659 1055.61277 87970.7 0.47134 0.00024925 0.51265 0.0002711 0.98399 0.00052035 528.813889578282 533.322564303215 53.724 0.27248 53.724 53.582 53.855 0 47 20 4 0 0 0 0.018672 1 30129 51.854 35.652 1 0.98963 1.0288 0 11485000 7079300 4405600 2024 1283 758 778 3167 3167 ALLNLPGTQTSGEAK 15 1 0 Unmodified _ALLNLPGTQTSGEAK_ 0 0 0 Q96GM8;B3KSC7 Q96GM8 Q96GM8 TOE1 Target of EGR1 protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.4079 2 750.406837 1498.79912 73268.58 0.7715 0.00057894 -0.44517 -0.00033406 0.32633 0.00024488 750.406273007159 754.413795093651 81.091 0.45833 81.091 80.891 81.349 7.6294E-06 122 39 4 0 0 0 0.00073709 2 49415 51.092 44.989 1 0.87023 0.90874 0 10942000 5528600 5413200 2025 1968 759 779 3168;3169 3169 ALLPLELQDDGSDSRK 16 1 1 Unmodified _ALLPLELQDDGSDSRK_ 0 0 1 Q15906;B4DMP5 Q15906 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.3126 3 586.307374 1755.90029 79158.67 0.81628 0.00047859 -0.82294 -0.00048249 -0.0066551 -3.9019E-06 586.306732561509 592.314229429332 86.925 0.51918 86.925 86.644 87.163 0 138 31 6 0 0 0 0.0089607 1 52499 23.839 15.829 1 0.75784 0.8693 0 26586000 14545000 12040000 2026 1767 760 780 3170 3170 ALLPWLLEQR 10 0 1 Unmodified _ALLPWLLEQR_ 0 0 0 F2Z2W7;Q8IZ69;B4E213 F2Z2W7 F2Z2W7 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.8673 2 619.866423 1237.71829 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.88 1 120.88 120.38 121.38 0 0 0 0 0.0097241 1 79948 57.859 24.738 1 2027 1254 761 781 3171 3171 ALLQAILQTEDMLK 14 1 0 Oxidation (M) _ALLQAILQTEDM(ox)LK_ ALLQAILQTEDM(1)LK ALLQAILQTEDM(80.71)LK 0 1 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.9495 2 801.942198 1601.86984 NaN NaN NaN 0.080588 6.4627E-05 NaN NaN NaN NaN 121.23 0.42159 121.23 121 121.42 7.6294E-06 0 0 0 9.7189E-05 1 78289 80.706 62.842 1 NaN NaN 0 4798200 0 4798200 2028 1486 762 782 3172 3172 1247 ALLQAILQTEDMLK 14 1 0 Oxidation (M) _ALLQAILQTEDM(ox)LK_ ALLQAILQTEDM(1)LK ALLQAILQTEDM(96.11)LK 0 1 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.9426 2 801.942198 1601.86984 68697.38 1.0297 0.00082577 -0.043554 -3.4928E-05 0.98616 0.00079085 801.941973531755 805.949938883404 120.72 0.5457 120.72 120.52 121.07 0 107 36 4 0 0 0 1.4603E-05 2 79745 96.113 96.113 1 0.56832 0.57338 0 13303000 8138400 5164600 2029 1486 762 782 3173;3174 3173 1247 ALLQDSAPQPALPQVQIPFPR 21 0 1 Unmodified _ALLQDSAPQPALPQVQIPFPR_ 0 0 0 A0A1C7CYX1;A0A0A0MSU2;A0PJD3;A0A024R689;Q6PJG2;H7C1L3 A0A1C7CYX1 A0A1C7CYX1 ELMSAN1;C14orf43 ELM2 and SANT domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1144.1385 2 1143.63388 2285.2532 58168.14 0.72151 0.00082515 0.53716 0.00061432 1.2587 0.0014395 1144.13563310881 1148.63801012291 124.91 0.18716 124.91 124.82 125 0 34 13 4 0 0 0 0.0051857 1 83167 26.541 26.541 1 0.50863 0.5134 0 5793900 3590600 2203300 2030 638 763 783 3175 3175 ALLQEFDNAVLSK 13 1 0 Unmodified _ALLQEFDNAVLSK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.8953 2 724.393199 1446.77184 72460.6 0.74341 0.00053852 0.17041 0.00012345 0.91382 0.00066196 724.393015695421 728.400411491578 108.02 0.55804 108.02 107.72 108.28 0 181 40 6 0 0 0 0.00019093 1 69174 70.942 47.622 1 0.86281 0.90664 0 34930000 17649000 17281000 2031 1312 764 784 3176 3176 ALLQEFDNAVLSK 13 1 0 Unmodified _ALLQEFDNAVLSK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 724.8951 2 724.393199 1446.77184 NaN NaN NaN 0.31179 0.00022586 NaN NaN NaN NaN 120.05 0.39267 120.05 119.87 120.27 0 0 0 0 9.2428E-21 1 71192 136.48 87.681 1 NaN NaN 0 6308900 6308900 0 2032 1312 764 784 3177 3177 ALLQEFDNAVLSK 13 1 0 Unmodified _ALLQEFDNAVLSK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.3945 2 724.393199 1446.77184 71589.85 0.83085 0.00060186 0.030657 2.2208E-05 0.86151 0.00062407 724.392622296616 728.400359746639 119.88 0.60161 119.88 119.47 120.08 0 98 25 9 0 0 0 0.0067183 1 70111 45.879 32.288 1 1.2682 1.0462 0 30329000 13794000 16535000 2033 1312 764 784 3178 3178 ALLQEQFR 8 0 1 Unmodified _ALLQEQFR_ 0 0 0 B4DRU9;A0A0S2Z5L1;Q9NUQ8 B4DRU9 B4DRU9 ABCF3 ATP-binding cassette sub-family F member 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.7843 2 502.779816 1003.54508 NaN NaN NaN 0.34886 0.0001754 NaN NaN NaN NaN 60.717 0.34019 60.717 60.548 60.888 3.8147E-06 0 0 0 0.0088194 1 34599 79.469 17.004 1 NaN NaN 0 11762000 0 11762000 2034 583 765 785 3179 3179 ALLQQQPEDDSK 12 1 0 Unmodified _ALLQQQPEDDSK_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.3407 2 686.341163 1370.66777 76517.5 0.91298 0.00062662 -0.41062 -0.00028182 0.50236 0.00034479 686.340914771335 690.347758224843 33.106 0.47409 33.106 32.822 33.296 3.8147E-06 97 47 4 0 0 0 5.6231E-13 2 16505 134.23 126.4 1 1.0529 1.0543 0 7660700 4348900 3311800 2035 2101 766 786 3180;3181 3181 ALLQQQPEDDSK 12 1 0 Unmodified _ALLQQQPEDDSK_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.843 2 686.341163 1370.66777 NaN NaN NaN 0.29569 0.00020294 NaN NaN NaN NaN 32.986 0.34745 32.986 32.785 33.133 0 0 0 0 0.0015939 1 16390 76.282 39.091 1 NaN NaN 0 5427800 5427800 0 2036 2101 766 786 3182 3182 ALLQQQPEDDSK 12 1 0 Unmodified _ALLQQQPEDDSK_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.3482 2 686.341163 1370.66777 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.713 1 32.713 32.213 33.213 0 0 0 0 1.821E-10 1 16290 108.57 76.635 1 2037 2101 766 786 3183 3183 ALLQQQPEDDSK 12 1 0 Unmodified _ALLQQQPEDDSK_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 690.3468 2 686.341163 1370.66777 74901.01 0.52096 0.00035756 -0.21302 -0.0001462 0.30794 0.00021135 686.341243419379 690.347935358044 37.781 0.59605 37.781 37.454 38.05 0 192 47 6 0 0 0 0.00017091 1 17024 91.636 91.636 1 1.442 1.124 0 3311400 1479200 1832200 2038 2101 766 786 3184 3184 ALLQQQPEDDSK 12 1 0 Unmodified _ALLQQQPEDDSK_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.348 2 686.341163 1370.66777 74019.16 0.32401 0.00022238 0.11593 7.9565E-05 0.43994 0.00030195 686.34146453181 690.348205722301 37.909 0.5186 37.909 37.623 38.142 0 190 43 6 0 0 0 1.9348E-05 2 16678 103.7 103.7 1 1.6542 1.3117 0 3151700 1135800 2015900 2039 2101 766 786 3185;3186 3186 ALLQSSASR 9 0 1 Unmodified _ALLQSSASR_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7624 2 466.761623 931.508694 NaN NaN NaN 0.16548 7.724E-05 NaN NaN NaN NaN 26.071 0.17228 26.071 26.004 26.176 -1.9073E-06 0 0 0 0.042159 1 11605 49.554 18.942 1 NaN NaN 0 2466400 2466400 0 2040 328 767 787 3187 3187 ALLQSSASR 9 0 1 Unmodified _ALLQSSASR_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.7665 2 466.761623 931.508694 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.111 1 26.111 25.611 26.611 0 0 0 0 0.0017517 1 11609 90.601 16.474 1 2041 328 767 787 3188 3188 ALLSASPEVVVAVGFPGAGK 20 1 0 Unmodified _ALLSASPEVVVAVGFPGAGK_ 0 0 0 M0R3C8;A0A0D9SFL2;M0QYH2;A0A1S5RA93;Q96T60;A0A0D9SFD6 M0R3C8 M0R3C8 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 935.029 2 935.027651 1868.04075 65965.46 0.66976 0.00062624 0.92783 0.00086754 1.5976 0.0014938 935.028570651501 939.034831932958 121.15 0.26013 121.15 121.01 121.27 0 59 17 5 0 0 0 1.4364E-06 2 78199 74.392 74.392 1 0.43744 0.44186 0 6954900 4436500 2518300 2042 526 768 788 3189;3190 3190 ALLSASPEVVVAVGFPGAGK 20 1 0 Unmodified _ALLSASPEVVVAVGFPGAGK_ 0 0 0 M0R3C8;A0A0D9SFL2;M0QYH2;A0A1S5RA93;Q96T60;A0A0D9SFD6 M0R3C8 M0R3C8 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 935.5305 2 935.027651 1868.04075 67601.04 0.9707 0.00090763 0.3906 0.00036522 1.3613 0.0012728 935.529543409991 939.535650610732 120.71 0.29235 120.71 120.57 120.86 -7.6294E-06 64 20 5 0 0 0 1.7229E-06 2 79764 72.29 72.29 1 0.59169 0.59463 0 7024800 4228300 2796500 2043 526 768 788 3191;3192 3191 ALLTQFET 8 0 0 Unmodified _ALLTQFET_ 0 0 0 Q96N64 Q96N64 Q96N64 PWWP2A PWWP domain-containing protein 2A ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 922.4887 1 922.488024 921.480748 NaN NaN NaN 0.45082 0.00041587 NaN NaN NaN NaN 113.66 0.63108 113.66 113.3 113.93 0 0 0 0 0.0093042 1 66271 87.754 78.514 1 2044 1980 769 789 3193 3193 ALLTTNQLPQPDVFPLFK 18 1 0 Unmodified _ALLTTNQLPQPDVFPLFK_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1022.0715 2 1021.56968 2041.12481 61788.79 0.60621 0.00061928 -0.28424 -0.00029037 0.32197 0.00032891 1022.0708400827 1025.57645972883 131.45 0.56805 131.45 131.15 131.72 0 296 37 10 0 0 0 2.5171E-05 2 85615 69.451 64.066 1 0.94191 1.0641 0 82134000 42096000 40038000 2045 2080 770 790 3194;3195 3194 ALLTTNQLPQPDVFPLFK 18 1 0 Unmodified _ALLTTNQLPQPDVFPLFK_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1021.5718 2 1021.56968 2041.12481 61633.96 0.54171 0.00055339 -0.22062 -0.00022538 0.32108 0.00032801 1022.07085050814 1026.07812217851 131 0.57639 131 130.7 131.27 0 335 42 10 0 0 0 2.6525E-06 3 87472 85.522 85.522 1 0.95538 1.0683 0 107840000 57489000 50348000 2046 2080 770 790 3196;3197;3198 3196 ALLVQVVNK 9 1 0 Unmodified _ALLVQVVNK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.3232 2 492.316035 982.617516 86018.48 0.14772 7.2725E-05 0.077652 3.8229E-05 0.22537 0.00011095 492.315984491934 496.323102653417 80.92 0.67609 80.92 80.583 81.259 0 189 43 6 0 0 0 0.00078426 2 43771 94.407 66.66 1 1.2726 1.008 0 4910200 2097500 2812800 2047 836;1683 771 791 3199;3200 3200 ALMDLLQLTR 10 0 1 Oxidation (M) _ALM(ox)DLLQLTR_ ALM(1)DLLQLTR ALM(50.19)DLLQLTR 0 1 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.3381 2 595.334098 1188.65364 NaN NaN NaN -0.070345 -4.1879E-05 NaN NaN NaN NaN 107.95 0.25178 107.95 107.79 108.04 0 0 0 0 0.0115 1 67354 50.194 22.423 1 NaN NaN 0 4683800 0 4683800 2048 1745 772 792 3201 3201 1596 ALMDLLQLTR 10 0 1 Oxidation (M) _ALM(ox)DLLQLTR_ ALM(1)DLLQLTR ALM(62.82)DLLQLTR 0 1 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8615 2 595.334098 1188.65364 81721.71 0.87659 0.00052186 -0.20142 -0.00011991 0.67516 0.00040195 595.333692997144 600.337953541727 106.17 0.51369 106.17 105.97 106.48 0 91 38 4 0 0 0 0.04276 1 67619 62.823 62.823 1 1.0691 1.0549 0 12889000 5737500 7151400 2049 1745 772 792 3202 3202 1596 ALMDLLQLTR 10 0 1 Oxidation (M) _ALM(ox)DLLQLTR_ ALM(1)DLLQLTR ALM(40.99)DLLQLTR 0 1 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.3345 2 595.334098 1188.65364 77719.23 0.78746 0.0004688 0.46164 0.00027483 1.2491 0.00074364 595.333875000441 600.338313442345 118.23 0.50172 118.23 117.92 118.42 0 54 20 5 0 0 0 0.016711 1 69761 40.994 40.994 1 0.76432 0.67601 0 1491900 848990 642900 2050 1745 772 792 3203 3203 1596 ALMDLLQLTR 10 0 1 Oxidation (M) _ALM(ox)DLLQLTR_ ALM(1)DLLQLTR ALM(41.54)DLLQLTR 0 1 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 600.8401 2 595.334098 1188.65364 NaN NaN NaN -0.44579 -0.00026539 NaN NaN NaN NaN 133.2 0.37613 133.2 133 133.37 0 0 0 0 0.023367 1 81132 41.54 24.154 1 NaN NaN 0 816300 0 816300 2051 1745 772 792 3204 3204 1596 ALMDLLQLTR 10 0 1 Oxidation (M) _ALM(ox)DLLQLTR_ ALM(1)DLLQLTR ALM(40.71)DLLQLTR 0 1 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.3384 2 595.334098 1188.65364 NaN NaN NaN -0.33003 -0.00019648 NaN NaN NaN NaN 132.92 0.3696 132.92 132.67 133.04 0 0 0 0 0.025637 1 79991 40.715 23.329 1 NaN NaN 0 651030 0 651030 2052 1745 772 792 3205 3205 1596 ALMDLLQLTR 10 0 1 Unmodified _ALMDLLQLTR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.3369 2 587.336641 1172.65873 80302.96 0.9388 0.00055139 -0.75874 -0.00044564 0.18006 0.00010576 587.336383534491 592.340492314168 133.21 0.50401 133.21 132.94 133.44 0 101 24 6 0 0 0 0.011074 2 81014 52.49 36.287 1 1.5081 1.2602 0 3393700 1613800 1779900 2053 1745 772 793 3206;3207 3207 ALMDLLQLTR 10 0 1 Unmodified _ALMDLLQLTR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.9891 2 587.336641 1172.65873 82591.02 1.1032 0.00064794 -0.62543 -0.00036734 0.47775 0.0002806 587.336276609683 592.340480038457 132.91 0.49896 132.91 132.67 133.17 0 82 22 6 0 0 0 0.045209 1 79954 61.161 44.959 1 1.6013 1.3919 0 3486900 1272700 2214200 2054 1745 772 793 3208 3208 ALNEQIAR 8 0 1 Unmodified _ALNEQIAR_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.7564 2 457.756341 913.498129 90308.28 -0.11406 -5.221E-05 2.22 0.0010162 2.106 0.00096403 457.756362187363 462.760375680206 27.65 0.31206 27.65 27.483 27.795 0 67 16 6 0 0 0 0.012238 1 12937 68.081 38.743 1 0.88842 0.97176 0 34481000 15159000 19322000 2055 696 773 794 3209 3209 ALNEQIAR 8 0 1 Unmodified _ALNEQIAR_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 462.761 2 457.756341 913.498129 92030.24 0.099806 4.5687E-05 0.22494 0.00010297 0.32475 0.00014866 457.756451166077 462.760511358298 31.781 0.33631 31.781 31.59 31.926 1.9073E-06 57 17 4 0 0 0 0.041092 1 13511 46.994 15.705 1 1.3244 1.1478 0 2029700 795830 1233800 2056 696 773 794 3210 3210 ALNFGLGR 8 0 1 Unmodified _ALNFGLGR_ 0 0 0 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 424.243 2 424.24287 846.471186 92328.16 -0.30233 -0.00012826 0.33479 0.00014203 0.032463 1.3772E-05 424.243060257035 429.247265786246 71.491 0.31739 71.491 71.325 71.643 0 92 23 6 0 0 0 5.2522E-06 2 42843 148.28 101.24 1 0.87082 0.95199 0 30442000 15859000 14583000 2057 1483 774 795 3211;3212 3211 ALNFGLGRPLPLHFLR 16 0 2 Unmodified _ALNFGLGRPLPLHFLR_ 0 0 1 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.2726 4 456.021612 1820.05734 90274.8 0.33509 0.00015281 -0.24068 -0.00010975 0.094417 4.3056E-05 456.272287235382 461.276432901679 115.16 0.82561 115.16 114.76 115.59 0 178 52 6 0 0 0 0.033112 1 74857 17.962 14.585 1 0.73042 0.78364 0 16015000 7594500 8420200 2058 1483 775 796 3213 3213 ALNFGLGRPLPLHFLR 16 0 2 Unmodified _ALNFGLGRPLPLHFLR_ 0 0 1 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.2768 4 456.021612 1820.05734 87078.78 0.54829 0.00025003 -0.33742 -0.00015387 0.21087 9.616E-05 456.272187643774 461.025596265213 122.45 0.59124 122.45 122.33 122.93 0 184 29 9 0 0 0 0.00058231 2 72997 41.967 30.446 1 1.0882 0.89406 0 28893000 12829000 16064000 2059 1483 775 796 3214;3215 3214 ALNFGLGRPLPLHFLR 16 0 2 Unmodified _ALNFGLGRPLPLHFLR_ 0 0 1 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 456.2726 4 456.021612 1820.05734 88381.84 0.38039 0.00017346 -0.21126 -9.634E-05 0.16912 7.7124E-05 456.27228697954 461.025552053623 122.24 0.71472 122.24 121.99 122.7 0 160 35 8 0 0 0 0.00011613 1 71891 49.482 45.514 1 1.0425 0.98397 0 74112000 37355000 36758000 2060 1483 775 796 3216 3216 ALNFGLGRPLPLHFLR 16 0 2 Unmodified _ALNFGLGRPLPLHFLR_ 0 0 1 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.0275 3 607.693057 1820.05734 78401.77 0.81248 0.00049374 -0.12346 -7.5024E-05 0.68902 0.00041872 608.027338321019 614.699556634768 122.24 0.43315 122.24 122.01 122.44 7.6294E-06 69 22 5 0 0 0 0.011003 1 71892 26.825 16.629 1 0.93627 0.86437 0 17614000 9155600 8458200 2061 1483 775 796 3217 3217 ALNHEIEELEK 11 1 0 Unmodified _ALNHEIEELEK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q7Z2X1;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.8394 2 662.840799 1323.66705 72647.01 0.78826 0.00052249 -0.40566 -0.00026889 0.3826 0.00025361 662.840445936093 666.847625193118 51.613 0.82774 51.613 51.299 52.127 0 404 71 8 0 0 0 7.111E-41 3 28472 194.17 141.68 1 0.82607 0.96603 0 283060000 155780000 127280000 2062 69 776 797 3218;3219;3220 3218 ALNHEIEELEK 11 1 0 Unmodified _ALNHEIEELEK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q7Z2X1;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.901 3 442.229625 1323.66705 89843.23 0.20417 9.0289E-05 0.1119 4.9484E-05 0.31606 0.00013977 442.229682125043 444.900979412044 51.607 0.93653 51.607 51.356 52.292 0 515 78 9 0 0 0 0.00064521 1 28513 69.721 56.713 1 0.89333 1.0554 0 384530000 203680000 180840000 2063 69 776 797 3221 3221 ALNHEIEELEK 11 1 0 Unmodified _ALNHEIEELEK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q7Z2X1;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.2297 3 442.229625 1323.66705 90172.73 0.03654 1.6159E-05 0.023276 1.0293E-05 0.059816 2.6452E-05 442.229703258203 444.900962621039 49.445 0.79671 49.445 49.066 49.863 -3.8147E-06 407 67 9 0 0 0 0.00012094 2 27679 76.332 56.128 1 0.86492 1.0183 0 450040000 243110000 206930000 2064 69 776 797 3222;3223 3222 ALNHEIEELEK 11 1 0 Unmodified _ALNHEIEELEK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q7Z2X1;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.3451 2 662.840799 1323.66705 72607.45 0.51405 0.00034074 -0.29265 -0.00019398 0.22141 0.00014676 662.84055465531 666.84802470672 49.445 0.94961 49.445 48.977 49.926 -3.8147E-06 509 71 14 0 0 0 0.0020202 1 27689 63.046 24.753 1 0.94769 1.1129 0 347820000 187380000 160440000 2065 69 776 797 3224 3224 ALNHEIEELEK 11 1 0 Unmodified _ALNHEIEELEK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q7Z2X1;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.8479 2 662.840799 1323.66705 74191.94 0.43407 0.00028772 -0.40513 -0.00026854 0.028941 1.9183E-05 662.840640039479 666.8477716718 59.134 1.1206 59.134 58.665 59.785 -3.8147E-06 495 89 10 0 0 0 7.3983E-08 2 30037 113.61 77.957 1 1.7856 1.4582 0 33404000 11502000 21903000 2066 69 776 797 3225;3226 3226 ALNHEIEELEK 11 1 0 Unmodified _ALNHEIEELEK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q7Z2X1;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 442.2295 3 442.229625 1323.66705 89931.22 -0.14851 -6.5674E-05 -0.0095896 -4.2408E-06 -0.1581 -6.9915E-05 442.22962622652 444.900944498562 59.133 1.222 59.133 58.785 60.007 0 504 92 9 0 0 0 0.00013418 2 30073 67.456 59.732 1 1.7807 1.4536 0 33045000 11246000 21799000 2067 69 776 797 3227;3228 3228 ALNHEIEELEK 11 1 0 Unmodified _ALNHEIEELEK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q7Z2X1;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 444.9008 3 442.229625 1323.66705 90175.04 0.028074 1.2415E-05 0.023881 1.0561E-05 0.051955 2.2976E-05 442.22964453477 444.900964902009 59.454 1.1085 59.454 59.089 60.197 -3.8147E-06 482 85 8 0 0 0 0.0024871 1 29575 50.354 42.988 1 1.7409 1.4402 0 32974000 11350000 21624000 2068 69 776 797 3229 3229 ALNHEIEELEK 11 1 0 Unmodified _ALNHEIEELEK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q7Z2X1;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.8413 2 662.840799 1323.66705 74882.75 0.49384 0.00032734 -0.34465 -0.00022845 0.14919 9.8887E-05 662.840583890141 666.847638192003 59.453 1.0416 59.453 59.115 60.156 0 465 80 8 0 0 0 1.2017E-16 2 29645 152.7 90.917 1 1.7697 1.4739 0 40051000 14083000 25968000 2069 69 776 797 3230;3231 3231 ALNILQSTNMAFGK 14 1 0 Oxidation (M) _ALNILQSTNM(ox)AFGK_ ALNILQSTNM(1)AFGK ALNILQSTNM(67.73)AFGK 0 1 0 Q6LES9;A8K3S0;Q59GW7;P40937;A8K4Z2 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.9025 2 762.397958 1522.78136 NaN NaN NaN 2.7608 0.0021048 NaN NaN NaN NaN 93.585 0.15104 93.585 93.504 93.655 -7.6294E-06 0 0 0 0.00057664 2 58079 67.726 39.713 1 NaN NaN 0 8349500 8349500 0 2070 726 777 798 3232;3233 3232 561 ALNLAFR 7 0 1 Unmodified _ALNLAFR_ 0 0 0 H0Y3N9;Q9UPP1;A0A024R9Y4;H0Y589;H0Y7M8;H7BZB7 H0Y3N9 H0Y3N9 PHF8 Histone lysine demethylase PHF8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 402.7397 2 402.739963 803.465373 95702.02 0.042541 1.7133E-05 -1.7616 -0.00070946 -1.7191 -0.00069233 402.739812624962 407.744054281947 73.06 0.17809 73.06 72.961 73.139 0 40 15 5 0 0 0 0.010181 1 42860 121.87 60.867 1 0.55923 0.57808 0 20200000 13022000 7178200 2071 1279 778 799 3234 3234 ALNLAFR 7 0 1 Unmodified _ALNLAFR_ 0 0 0 H0Y3N9;Q9UPP1;A0A024R9Y4;H0Y589;H0Y7M8;H7BZB7 H0Y3N9 H0Y3N9 PHF8 Histone lysine demethylase PHF8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 402.7398 2 402.739963 803.465373 96158.84 -0.07346 -2.9585E-05 -1.994 -0.00080306 -2.0675 -0.00083265 402.73962200665 407.743998323834 71.694 0.15154 71.694 71.602 71.754 0 30 10 5 0 0 0 0.0099923 1 43015 116 61.461 1 0.63833 0.66759 0 22616000 13515000 9101400 2072 1279 778 799 3235 3235 ALNMAIPGGPK 11 1 0 Oxidation (M) _ALNM(ox)AIPGGPK_ ALNM(1)AIPGGPK ALNM(45.74)AIPGGPK 0 1 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.7938 2 542.794609 1083.57467 82445.81 0.90043 0.00048875 -0.20104 -0.00010913 0.69938 0.00037962 542.794293401289 546.801772100015 44.252 0.5039 44.252 43.942 44.446 0 112 44 4 0 0 0 0.0080383 1 23787 45.74 25.04 1 1.0773 1.0776 0 18800000 8698800 10101000 2073 1854 779 800 3236 3236 1704 ALNMAIPGGPK 11 1 0 Oxidation (M) _ALNM(ox)AIPGGPK_ ALNM(1)AIPGGPK ALNM(72.04)AIPGGPK 0 1 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.8014 2 542.794609 1083.57467 82528.15 0.60792 0.00032998 -0.28172 -0.00015291 0.3262 0.00017706 542.794395374519 546.801479525788 43.521 0.41206 43.521 43.247 43.659 0 101 33 5 0 0 0 0.0004098 2 23628 72.038 72.038 1 1.0263 1.0904 0 36160000 18235000 17926000 2074 1854 779 800 3237;3238 3237 1704 ALNTLSSPGQSSFSHGTR 18 0 1 Unmodified _ALNTLSSPGQSSFSHGTR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.6422 3 616.306256 1845.89694 75561.37 0.82496 0.00050843 -0.1063 -6.5514E-05 0.71865 0.00044291 616.64149795234 619.976467225429 45.194 0.73811 45.194 44.862 45.6 0 490 65 12 0 0 0 5.627E-40 4 24219 123.14 123.14 1 0.51394 0.59301 0 155030000 111400000 43629000 2075 1942 780 801 3239;3240;3241;3242 3240 ALNTLSSPGQSSFSHGTR 18 0 1 Unmodified _ALNTLSSPGQSSFSHGTR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 928.9603 2 923.955746 1845.89694 63947.3 0.98111 0.00090651 0.42487 0.00039256 1.406 0.0012991 924.457763485875 928.9599832778 45.146 0.2617 45.146 45.005 45.266 0 77 22 6 0 0 0 9.917E-12 2 24279 105.14 105.14 1 0.6372 0.65103 0 26591000 16595000 9996000 2076 1942 780 801 3243;3244 3244 ALNTLSSPGQSSFSHGTR 18 0 1 Unmodified _ALNTLSSPGQSSFSHGTR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.6428 3 616.306256 1845.89694 NaN NaN NaN -0.54998 -0.00033896 NaN NaN NaN NaN 43.939 0.45494 43.939 43.696 44.151 -3.8147E-06 0 0 0 1.1692E-17 1 23881 111.77 94.517 1 NaN NaN 0 51064000 0 51064000 2077 1942 780 801 3245 3245 ALNTLSSPGQSSFSHGTR 18 0 1 Unmodified _ALNTLSSPGQSSFSHGTR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.9597 2 923.955746 1845.89694 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.99 1 43.99 43.49 44.49 0 0 0 0 0.028868 1 23982 40.552 20.948 1 2078 1942 780 801 3246 3246 ALNTLSSPGQSSFSHGTR 18 0 1 Unmodified _ALNTLSSPGQSSFSHGTR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.6423 3 616.306256 1845.89694 75809.76 0.23676 0.00014592 0.39263 0.00024198 0.62939 0.0003879 616.306624053732 619.642420276168 52.436 0.89965 52.436 52.025 52.925 0 356 72 9 0 0 0 1.5874E-06 2 25864 80.316 80.316 1 1.4269 1.2103 0 32644000 13752000 18892000 2079 1942 780 801 3247;3248 3247 ALNTLSSPGQSSFSHGTR 18 0 1 Unmodified _ALNTLSSPGQSSFSHGTR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 619.6428 3 616.306256 1845.89694 75819.3 0.30585 0.0001885 0.21869 0.00013478 0.52454 0.00032328 616.306517921453 619.642415995231 52.826 0.80695 52.826 52.536 53.343 0 373 60 10 0 0 0 2.2546E-08 2 25477 99.021 84.767 1 1.4492 1.258 0 24122000 9543300 14578000 2080 1942 780 801 3249;3250 3249 ALNTLSSPGQSSFSHGTR 18 0 1 Unmodified _ALNTLSSPGQSSFSHGTR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 929.4627 2 923.955746 1845.89694 63841.17 0.26239 0.00024243 0.16881 0.00015597 0.43119 0.0003984 923.956094372683 928.95987823302 52.834 0.42934 52.834 52.634 53.063 0 162 32 8 0 0 0 0.00093379 1 25502 39.033 39.033 1 1.3988 1.1862 0 3008500 1116800 1891700 2081 1942 780 801 3251 3251 ALNVVQSVLQINLSNSTNR 19 0 1 Unmodified _ALNVVQSVLQINLSNSTNR_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1036.0717 2 1035.56873 2069.12292 60311.55 0.8509 0.00088116 -0.015929 -1.6496E-05 0.83497 0.00086467 1036.06964721676 1041.07474742218 121.58 0.41182 121.58 121.34 121.75 0 133 26 8 0 0 0 6.2285E-17 2 78550 120.53 120.53 1 1.1068 1.1295 0 14709000 6169800 8538900 2082 104 781 802 3252;3253 3252 ALNVVQSVLQINLSNSTNR 19 0 1 Unmodified _ALNVVQSVLQINLSNSTNR_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1036.0715 2 1035.56873 2069.12292 60090.13 0.65062 0.00067376 0.34677 0.00035911 0.99739 0.0010329 1035.56953260257 1040.57363734233 121.1 0.38401 121.1 120.92 121.31 -7.6294E-06 99 22 7 0 0 0 6.1442E-06 2 80052 78.763 78.763 1 1.0323 1.0141 0 13632000 5686600 7945200 2083 104 781 802 3254;3255 3254 ALPASETPK 9 1 0 Unmodified _ALPASETPK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.2607 2 457.2531 912.491647 89268.6 0.16264 7.437E-05 -0.27685 -0.00012659 -0.1142 -5.2219E-05 457.252949282772 461.259963844722 24.133 0.91792 24.133 23.75 24.668 0 152 40 6 0 0 0 0.002124 1 9867 76.478 33.563 1 0.63663 0.75373 0 440950000 269470000 171480000 2084 1415 782 803 3256 3256 ALPASETPK 9 1 0 Unmodified _ALPASETPK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.2601 2 457.2531 912.491647 89245.53 -0.26308 -0.00012029 0.047116 2.1544E-05 -0.21597 -9.8751E-05 457.253066052747 461.26012489693 23.859 0.8382 23.859 23.62 24.458 0 120 33 6 0 0 0 0.002701 1 9652 73.665 29.85 1 0.63552 0.74821 0 449030000 263090000 185940000 2085 1415 782 803 3257 3257 ALPASETPK 9 1 0 Unmodified _ALPASETPK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 457.253 2 457.2531 912.491647 89542.6 0.11472 5.2458E-05 0.13113 5.9959E-05 0.24585 0.00011242 457.253119094716 461.260154231419 26.406 0.75455 26.406 26.139 26.894 -1.9073E-06 169 33 8 0 0 0 0.0066845 2 9928 63.565 23.462 1 0.70793 0.58117 0 37638000 21832000 15807000 2086 1415 782 803 3258;3259 3259 ALPASETPK 9 1 0 Unmodified _ALPASETPK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 457.253 2 457.2531 912.491647 87633.7 -0.13387 -6.121E-05 0.17914 8.1914E-05 0.045278 2.0704E-05 457.253141080458 461.260157862409 26.427 0.75571 26.427 26.19 26.946 0 170 35 8 0 0 0 0.017716 2 9431 52.716 12.613 1 0.69811 0.57589 0 30342000 17878000 12464000 2087 1415 782 803 3260;3261 3261 ALPAVQQNNLDEDLIRK 17 1 1 Unmodified _ALPAVQQNNLDEDLIRK_ 0 0 1 A0A024R1A3;P22314 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3612 3 646.353206 1936.03779 NaN NaN NaN 0.13022 8.4165E-05 NaN NaN NaN NaN 78.911 0.35828 78.911 78.77 79.128 0 0 0 0 0.0026021 1 47948 43.37 25.453 1 NaN NaN 0 7515100 0 7515100 2088 74 783 804 3262 3262 ALPEFFNGK 9 1 0 Unmodified _ALPEFFNGK_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.7687 2 511.768917 1021.52328 86299.23 0.35015 0.00017919 0.49107 0.00025131 0.84122 0.00043051 511.769056457128 515.776222918195 83.412 0.58121 83.412 83.146 83.727 0 177 49 6 0 0 0 0.0009829 2 49856 91.626 89.123 1 0.72883 0.78462 0 40667000 24305000 16363000 2089 1798;321 784 805 3263;3264 3263 ALPEFFNGK 9 1 0 Unmodified _ALPEFFNGK_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7692 2 511.768917 1021.52328 87291.9 0.42362 0.0002168 0.24033 0.000123 0.66395 0.00033979 511.768930896494 515.77610530495 82.314 0.57788 82.314 82.057 82.635 0 206 50 6 0 0 0 0.00017704 3 50329 107.32 96.444 1 0.7688 0.78294 0 30691000 17049000 13642000 2090 1798;321 784 805 3265;3266;3267 3265 ALPFWNEEIVPQIK 14 1 0 Unmodified _ALPFWNEEIVPQIK_ 0 0 0 B4DMJ7;B4DKL5;Q6P6D7;Q6FHU2;Q6FHK8;Q53G35;P18669;B7ZW15;B7Z9E5;B4DJA4;A4D2J6;P15259;Q8N0Y7 B4DMJ7 B4DMJ7 hCG_2015269;PGAM1;PGAM2;PGAM4 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Phosphoglycerate mutase 2;Probable phosphoglycerate mutase 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.4687 2 842.458873 1682.90319 NaN NaN NaN 0.88246 0.00074343 NaN NaN NaN NaN 123.04 0.33961 123.04 122.9 123.24 0 0 0 0 0.00030436 1 81671 81.017 57.03 1 NaN NaN 0 6208600 0 6208600 2091 991 785 806 3268 3268 ALPLIVGAQLIHADK 15 1 0 Unmodified _ALPLIVGAQLIHADK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.9752 2 779.969408 1557.92426 68734.78 0.59911 0.00046729 0.33386 0.0002604 0.93297 0.00072768 779.970002952723 783.976690266559 109.54 0.84813 109.54 109.26 110.1 0 326 62 8 0 0 0 0.00066662 2 68454 66.538 66.538 1 0.66541 0.73552 0 57285000 28958000 28327000 2092 1817 786 807 3269;3270 3269 ALPLIVGAQLIHADK 15 1 0 Unmodified _ALPLIVGAQLIHADK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.6506 3 520.315364 1557.92426 83543.81 0.37817 0.00019677 -0.13614 -7.0836E-05 0.24203 0.00012593 520.31526359747 522.986652505762 109.52 0.73452 109.52 109.26 109.99 0 363 54 8 0 0 0 0.0090778 1 68547 27.58 27.58 1 0.64973 0.7351 0 102420000 61760000 40655000 2093 1817 786 807 3271 3271 ALPLIVGAQLIHADK 15 1 0 Unmodified _ALPLIVGAQLIHADK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.3207 3 520.315364 1557.92426 84040.02 0.47436 0.00024682 -0.31768 -0.00016529 0.15669 8.1527E-05 520.31527065517 522.986615874212 108.8 0.66271 108.8 108.47 109.13 0 288 47 9 0 0 0 0.0013916 2 69494 38.995 38.995 1 0.65143 0.7291 0 109590000 69976000 39615000 2094 1817 786 807 3272;3273 3272 ALPLIVGAQLIHADK 15 1 0 Unmodified _ALPLIVGAQLIHADK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.9706 2 779.969408 1557.92426 68450.12 0.70147 0.00054712 0.4911 0.00038304 1.1926 0.00093016 779.969868142304 783.976582184566 108.77 0.60152 108.77 108.47 109.07 0 248 42 8 0 0 0 0.00022252 3 69564 83.226 83.226 1 0.68195 0.76668 0 72834000 41302000 31531000 2095 1817 786 807 3274;3275;3276 3276 ALPLIVGAQLIHADK 15 1 0 Unmodified _ALPLIVGAQLIHADK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.9872 3 520.315364 1557.92426 83088.11 0.26657 0.0001387 0.41118 0.00021394 0.67775 0.00035264 520.316091931179 522.986708801287 120.18 0.65555 120.18 119.97 120.62 0 200 28 10 0 0 0 0.00017781 2 71225 54.501 54.501 1 0.70588 0.57322 0 27540000 16287000 11252000 2096 1817 786 807 3277;3278 3277 ALPLIVGAQLIHADK 15 1 0 Unmodified _ALPLIVGAQLIHADK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.9767 2 779.969408 1557.92426 69366.01 0.63447 0.00049486 0.30027 0.00023421 0.93474 0.00072907 779.969701936493 783.976663480046 120.18 0.65555 120.18 119.97 120.62 0 186 28 10 0 0 0 0.00022491 2 71251 92.19 92.19 1 0.78046 0.63725 0 33268000 19465000 13803000 2097 1817 786 807 3279;3280 3279 ALPLIVGAQLIHADK 15 1 0 Unmodified _ALPLIVGAQLIHADK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.4716 2 779.969408 1557.92426 69458.96 0.78834 0.00061488 0.086617 6.7559E-05 0.87496 0.00068244 779.969534489861 783.976511934489 119.88 0.64993 119.88 119.65 120.3 0 178 27 10 0 0 0 1.2549E-05 2 70122 106.67 106.67 1 0.76814 0.64586 0 50798000 29247000 21551000 2098 1817 786 807 3281;3282 3282 ALPLIVGAQLIHADK 15 1 0 Unmodified _ALPLIVGAQLIHADK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.9868 3 520.315364 1557.92426 NaN NaN NaN -0.34164 -0.00017776 NaN NaN NaN NaN 119.88 0.48479 119.88 119.68 120.16 -7.6294E-06 0 0 0 0.037674 1 70090 27.85 8.7924 1 NaN NaN 0 19417000 0 19417000 2099 1817 786 807 3283 3283 ALPLIVGAQLIHADK 15 1 0 Unmodified _ALPLIVGAQLIHADK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.3154 3 520.315364 1557.92426 NaN NaN NaN 1.415 0.00073623 NaN NaN NaN NaN 119.88 0.81075 119.88 119.47 120.28 0 0 0 0 0.018172 1 70181 34.851 21.278 1 NaN NaN 0 26358000 26358000 0 2100 1817 786 807 3284 3284 ALPLPHFDTINLPEK 15 1 0 Unmodified _ALPLPHFDTINLPEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.6531 3 568.982162 1703.92466 80592.9 0.50127 0.00028521 0.14491 8.245E-05 0.64618 0.00036766 568.982258213644 571.653453684837 109.8 0.79371 109.8 109.48 110.27 7.6294E-06 363 57 9 0 0 0 0.00097854 3 68634 43.798 43.798 1 0.77029 0.86824 0 75821000 45204000 30617000 2101 1837 787 808 3285;3286;3287 3286 ALPLPHFDTINLPEK 15 1 0 Unmodified _ALPLPHFDTINLPEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.6531 3 568.982162 1703.92466 80182.35 0.85963 0.00048912 -0.25402 -0.00014453 0.60562 0.00034459 568.982049935539 571.653191623148 109.06 0.81387 109.06 108.6 109.42 0 339 58 10 0 0 0 0.00023959 2 69775 46.319 46.319 1 0.80447 0.89897 0 94346000 50987000 43359000 2102 1837 787 808 3288;3289 3289 ALPLPHFDTINLPEK 15 1 0 Unmodified _ALPLPHFDTINLPEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.9882 3 568.982162 1703.92466 79738.06 0.45393 0.00025828 0.18976 0.00010797 0.64368 0.00036624 568.982303644062 571.653643280517 120.4 0.52808 120.4 120.09 120.62 0 188 23 11 0 0 0 0.0001303 2 71376 53.169 53.169 1 1.2999 1.071 0 40833000 18419000 22414000 2103 1837 787 808 3290;3291 3290 ALPLPHFDTINLPEK 15 1 0 Unmodified _ALPLPHFDTINLPEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.317 3 568.982162 1703.92466 80295.86 0.73498 0.00041819 0.24877 0.00014155 0.98376 0.00055974 568.982344023204 571.653640047304 120.13 0.83932 120.13 119.77 120.61 0 200 42 10 0 0 0 0.0071402 2 70281 26.781 26.781 1 1.2695 1.075 0 60540000 26461000 34079000 2104 1837 787 808 3292;3293 3293 ALPQTPRPR 9 0 2 Unmodified _ALPQTPRPR_ 0 0 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 345.8733 3 345.873447 1034.59851 103506.4 0.097731 3.3802E-05 -0.5965 -0.00020631 -0.49877 -0.00017251 345.873269945699 352.545454956936 24.145 0.28251 24.145 24.014 24.296 0 37 12 5 0 0 0 0.0019465 1 9972 69.825 34.283 1 1.0275 1.1487 0 7279000 2336200 4942800 2105 619 788 809 3294 3294 ALPQTPRPR 9 0 2 Unmodified _ALPQTPRPR_ 0 0 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 345.8731 3 345.873447 1034.59851 103522.3 -0.39732 -0.00013742 0.22521 7.7893E-05 -0.17211 -5.9529E-05 345.87348466021 352.545609054531 23.793 0.31219 23.793 23.62 23.932 0 35 11 5 0 0 0 0.0009149 1 9621 78.334 50.853 1 1.0972 1.0788 0 5254000 2061400 3192600 2106 619 788 809 3295 3295 ALPTQQGLQGR 11 0 1 Unmodified _ALPTQQGLQGR_ 0 0 0 Q7Z5J4;A8MXE8 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.8298 2 584.825286 1167.63602 80218.78 0.37345 0.0002184 0.097873 5.7239E-05 0.47132 0.00027564 584.825608125005 589.829335866522 40.613 0.4594 40.613 40.39 40.85 0 127 38 4 0 0 0 0.017321 1 18696 45.368 27.143 1 1.9354 1.6759 0 2576800 1128000 1448800 2107 1879 789 810 3296 3296 ALPVAVAVAEAQR 13 0 1 Unmodified _ALPVAVAVAEAQR_ 0 0 0 A2SX38;H3BNT0 A2SX38 A2SX38 CACNA1H ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.8859 2 647.877519 1293.74048 NaN NaN NaN 1.8829 0.0012199 NaN NaN NaN NaN 110.29 0.37502 110.29 110.07 110.45 0 0 0 0 0.0030996 1 69157 66.435 5.9982 1 NaN NaN 0 8026400 0 8026400 2108 654 790 811 3297 3297 ALQAAIQQLAEAQPEATAK 19 1 0 Unmodified _ALQAAIQQLAEAQPEATAK_ 0 0 0 E1NZA1;Q92616;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 977.0261 2 976.526004 1951.03745 64485.54 0.37953 0.00037062 0.13292 0.0001298 0.51244 0.00050042 977.027035973704 981.03458790785 97.434 0.58113 97.434 97.112 97.693 0 156 50 5 0 0 0 8.1947E-17 4 59476 119.01 119.01 1 2.023 2.0264 0 18734000 7874200 10859000 2109 1205 791 812 3298;3299;3300;3301 3299 ALQAAIQQLAEAQPEATAK 19 1 0 Unmodified _ALQAAIQQLAEAQPEATAK_ 0 0 0 E1NZA1;Q92616;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.0276 2 976.526004 1951.03745 63197.86 0.46108 0.00045026 0.03759 3.6707E-05 0.49867 0.00048696 977.027220827054 980.533622645837 96.676 0.5797 96.676 96.4 96.98 0 148 48 5 0 0 0 7.0121E-64 3 60307 176.91 176.91 1 1.8877 1.9611 0 18900000 7140800 11760000 2110 1205 791 812 3302;3303;3304 3304 ALQAAIQQLAEAQPEATAK 19 1 0 Unmodified _ALQAAIQQLAEAQPEATAK_ 0 0 0 E1NZA1;Q92616;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 980.5339 2 976.526004 1951.03745 61315.43 0.31178 0.00030446 -0.89161 -0.00087068 -0.57983 -0.00056622 977.023993863647 980.532771970471 110.72 0.47575 110.72 110.58 111.05 0 59 20 6 0 0 0 2.5353E-05 1 64077 58.831 43.629 1 1.4362 1.1369 0 4981800 2357200 2624600 2111 1205 791 812 3305 3305 ALQAAIQQLAEAQPEATAK 19 1 0 Unmodified _ALQAAIQQLAEAQPEATAK_ 0 0 0 E1NZA1;Q92616;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 976.5267 2 976.526004 1951.03745 62034.09 0.29087 0.00028404 -0.14455 -0.00014116 0.14631 0.00014288 976.525925337632 980.533443640793 110.61 0.39824 110.61 110.45 110.85 7.6294E-06 83 19 8 0 0 0 0.0005091 1 63042 39.815 39.815 1 1.2902 1.0394 0 4277200 1813500 2463600 2112 1205 791 812 3306 3306 ALQAEIAALR 10 0 1 Unmodified _ALQAEIAALR_ 0 0 0 Q6IPU0;A0A087WTF1 Q6IPU0 Q6IPU0 CENPP Centromere protein P ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.3189 2 528.314023 1054.61349 NaN NaN NaN 0.32271 0.00017049 NaN NaN NaN NaN 90.769 0.47089 90.769 90.543 91.014 0 0 0 0 0.030216 1 50332 51.949 25.565 1 NaN NaN 0 797810 0 797810 2113 1845 792 813 3307 3307 ALQALEELR 9 0 1 Unmodified _ALQALEELR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.802 2 521.798206 1041.58186 NaN NaN NaN -0.64422 -0.00033615 NaN NaN NaN NaN 77.824 0.66492 77.824 77.436 78.1 0 0 0 0 8.1393E-05 2 46012 101.64 45.633 1 NaN NaN 0 9348400 0 9348400 2114 1754 793 814 3308;3309 3308 ALQALQNEPIPER 13 0 1 Unmodified _ALQALQNEPIPER_ 0 0 0 E5RJN7;E7EVI1;B7Z1P6;A0A0A0MTC4;A0A0A0MTD1;Q2TBD5;F8VPI7;A8K276;Q4LE57;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;A0A024R7X7;Q9NUL3;E5RFK1 E5RJN7 E5RJN7 STAU2;STAU2 variant protein Double-stranded RNA-binding protein Staufen homolog 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.9026 2 739.901722 1477.78889 NaN NaN NaN 0.58121 0.00043004 NaN NaN NaN NaN 70.166 0.25554 70.166 70.049 70.304 0 0 0 0 0.00013575 1 41882 90.685 73.249 1 NaN NaN 0 4430900 4430900 0 2115 237 794 815 3310 3310 ALQDSAPDRPSPVER 15 0 2 Unmodified _ALQDSAPDRPSPVER_ 0 0 1 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48;A0A1B0GWF6 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.613 3 546.612909 1636.8169 83179.48 0.34476 0.00018845 0.0071795 3.9244E-06 0.35194 0.00019237 546.612792293505 553.285414745042 35.328 0.32364 35.328 35.161 35.484 0 96 27 5 0 0 0 0.0020043 2 15687 39.509 39.509 1 1.1921 1.0882 0 2186700 999320 1187400 2116 631 795 816 3311;3312 3311 ALQDSAPDRPSPVER 15 0 2 Unmodified _ALQDSAPDRPSPVER_ 0 0 1 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48;A0A1B0GWF6 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.2855 3 546.612909 1636.8169 81981.84 0.63179 0.00034534 -0.15814 -8.6442E-05 0.47365 0.0002589 546.612789700152 553.285225908368 35.445 0.31605 35.445 35.271 35.587 0 78 26 5 0 0 0 0.0020043 1 15265 39.509 19.413 1 1.2166 1.0826 0 1795300 925330 869940 2117 631 795 816 3313 3313 ALQEEIDR 8 0 1 Unmodified _ALQEEIDR_ 0 0 0 Q1ED39;H3BPL4;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2552 2 487.251089 972.487624 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.778 1 30.778 30.278 31.278 1.9073E-06 0 0 0 0.0055803 1 15139 83.265 12.997 1 2118 1775 796 817 3314 3314 ALQEEIDR 8 0 1 Unmodified _ALQEEIDR_ 0 0 0 Q1ED39;H3BPL4;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2548 2 487.251089 972.487624 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.907 1 30.907 30.407 31.407 0 0 0 0 0.030744 1 15211 62.546 1.7584 1 2119 1775 796 817 3315 3315 ALQEEIDRESGK 12 1 1 Unmodified _ALQEEIDRESGK_ 0 0 1 Q1ED39;H3BPL4;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.8477 2 687.846613 1373.67867 NaN NaN NaN 0.18116 0.00012461 NaN NaN NaN NaN 26.875 0.22344 26.875 26.738 26.961 0 0 0 0 1.9873E-07 1 12150 113.93 57.363 1 NaN NaN 0 5058200 5058200 0 2120 1775 797 818 3316 3316 ALQEEIDRESGK 12 1 1 Unmodified _ALQEEIDRESGK_ 0 0 1 Q1ED39;H3BPL4;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.8469 2 687.846613 1373.67867 76896.73 0.38895 0.00026754 0.11518 7.9227E-05 0.50413 0.00034677 687.846750244342 696.858345416667 26.336 0.27213 26.336 26.212 26.485 1.9073E-06 51 16 6 0 0 0 0.0010902 1 11759 79.201 64.264 1 0.80095 0.8928 0 11128000 5499300 5628800 2121 1775 797 818 3317 3317 ALQEEIDRESGK 12 1 1 Unmodified _ALQEEIDRESGK_ 0 0 1 Q1ED39;H3BPL4;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.8593 2 687.846613 1373.67867 NaN NaN NaN 0.80443 0.00055332 NaN NaN NaN NaN 30.921 0.33799 30.921 30.79 31.128 0 0 0 0 0.041313 1 12440 66.267 32.889 1 NaN NaN 0 1741400 0 1741400 2122 1775 797 818 3318 3318 ALQEFDLALR 10 0 1 Unmodified _ALQEFDLALR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.3252 2 588.324588 1174.63462 78965.13 0.53617 0.00031544 0.46521 0.00027369 1.0014 0.00058914 588.324712217809 593.328865437886 99.597 1.0871 99.597 99.015 100.1 0 515 91 8 0 0 0 4.0245E-06 2 60817 109.71 57.927 1 0.78805 0.90815 0 150780000 83534000 67251000 2123 899;1099 798 819 3319;3320 3320 ALQEFDLALR 10 0 1 Unmodified _ALQEFDLALR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3289 2 588.324588 1174.63462 79007.19 0.76038 0.00044735 0.67644 0.00039797 1.4368 0.00084532 588.32473851961 593.329057135267 98.745 0.923 98.745 98.392 99.315 0 394 76 6 0 0 0 0.00060252 1 61662 84.213 26.253 1 0.78921 0.89974 0 137550000 72889000 64658000 2124 899;1099 798 819 3321 3321 ALQEFDLALR 10 0 1 Unmodified _ALQEFDLALR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.3257 2 588.324588 1174.63462 78788.98 0.85253 0.00050157 0.26588 0.00015643 1.1184 0.00065799 588.324613360128 593.328800798212 112.23 0.65199 112.23 111.97 112.63 0 205 37 7 0 0 0 1.1374E-05 2 65072 104.2 59.75 1 1.0869 0.91686 0 28871000 12976000 15895000 2125 899;1099 798 819 3322;3323 3323 ALQEFDLALR 10 0 1 Unmodified _ALQEFDLALR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.3292 2 588.324588 1174.63462 80037.69 0.60235 0.00035438 0.41113 0.00024188 1.0135 0.00059625 588.324682128447 593.32895353063 112.08 0.71512 112.08 111.77 112.48 7.6294E-06 202 38 7 0 0 0 0.00074153 2 64014 81.972 30.905 1 1.0505 0.9163 0 31658000 15512000 16146000 2126 899;1099 798 819 3324;3325 3325 ALQFPPEGWLR 11 0 1 Unmodified _ALQFPPEGWLR_ 0 0 0 Q96HS1;F5GXG4 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.3576 2 657.35368 1312.69281 NaN NaN NaN -0.68199 -0.00044831 NaN NaN NaN NaN 114.65 0.89825 114.65 114.35 115.24 0 0 0 0 0.0067665 1 72812 63.216 38.322 1 NaN NaN 0 6027100 0 6027100 2127 1972 799 820 3326 3326 ALQFPPEGWLR 11 0 1 Unmodified _ALQFPPEGWLR_ 0 0 0 Q96HS1;F5GXG4 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.3579 2 657.35368 1312.69281 NaN NaN NaN -0.88302 -0.00058046 NaN NaN NaN NaN 113.94 0.95296 113.94 113.69 114.64 -7.6294E-06 0 0 0 0.0056298 1 74074 64.654 35.277 1 NaN NaN 0 5264000 0 5264000 2128 1972 799 820 3327 3327 ALQIVYGIR 9 0 1 Unmodified _ALQIVYGIR_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4;B1AQT4;E9PP32;E9PKH1;B1AQT3 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.8135 2 516.813659 1031.61277 NaN NaN NaN 0.13257 6.8511E-05 NaN NaN NaN NaN 98.66 0.35166 98.66 98.487 98.839 0 0 0 0 0.0038201 1 55646 77.674 39.436 1 NaN NaN 0 2841100 2841100 0 2129 264 800 821 3328 3328 ALQLEVDRLEELK 13 1 1 Unmodified _ALQLEVDRLEELK_ 0 0 1 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.3014 3 519.294517 1554.86172 85144.76 0.6937 0.00036023 0.2195 0.00011398 0.9132 0.00047422 519.29452555659 525.302291949126 93.906 0.66263 93.906 93.674 94.336 0 302 60 7 0 0 0 0.00048291 2 56943 56.122 36.113 1 0.62616 0.74895 0 54969000 33242000 21728000 2130 353 801 822 3329;3330 3330 ALQLEVDRLEELK 13 1 1 Unmodified _ALQLEVDRLEELK_ 0 0 1 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.6289 3 519.294517 1554.86172 84353.01 0.51504 0.00026746 0.0099153 5.149E-06 0.52496 0.00027261 519.294383352886 525.302212686144 92.792 0.68003 92.792 92.624 93.304 0 247 56 6 0 0 0 0.0022384 2 57513 47.991 47.991 1 0.63454 0.74045 0 46501000 22957000 23545000 2131 353 801 822 3331;3332 3332 ALQLEVDRLEELK 13 1 1 Unmodified _ALQLEVDRLEELK_ 0 0 1 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.4392 2 778.438138 1554.86172 72388.3 0.68519 0.00053338 0.83453 0.00064963 1.5197 0.001183 778.438868339005 787.44968717194 92.884 0.38055 92.884 92.624 93.004 0 87 29 5 0 0 0 0.00062188 1 57514 81.92 62.261 1 0.57613 0.65065 0 15085000 9027500 6057500 2132 353 801 822 3333 3333 ALQLEVDRLEELK 13 1 1 Unmodified _ALQLEVDRLEELK_ 0 0 1 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.3022 3 519.294517 1554.86172 82779.55 0.42641 0.00022143 -0.071195 -3.6971E-05 0.35522 0.00018446 519.294417983433 525.301885410436 107.18 0.46151 107.18 106.95 107.41 -7.6294E-06 147 27 9 0 0 0 5.3959E-05 1 61325 62.042 35.501 1 1.1039 0.96414 0 23860000 11976000 11885000 2133 353 801 822 3334 3334 ALQLEVDRLEELK 13 1 1 Unmodified _ALQLEVDRLEELK_ 0 0 1 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.4402 2 778.438138 1554.86172 67848.47 0.76942 0.00059895 0.6052 0.00047111 1.3746 0.0010701 778.940453360581 787.449462766145 107.17 0.38183 107.17 106.97 107.35 0 115 22 8 0 0 0 0.00065264 1 61343 87.667 73.248 1 1.1692 1.0179 0 20344000 9266700 11077000 2134 353 801 822 3335 3335 ALQLEVDRLEELK 13 1 1 Unmodified _ALQLEVDRLEELK_ 0 0 1 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.2939 3 519.294517 1554.86172 82967.25 0.36351 0.00018877 -0.10367 -5.3835E-05 0.25984 0.00013494 519.294496510578 525.301895231115 106.95 0.44376 106.95 106.74 107.18 0 147 25 8 0 0 0 0.001262 2 60261 52.555 52.555 1 1.1669 0.99218 0 31145000 14156000 16989000 2135 353 801 822 3336;3337 3337 ALQLILDVLNPETSEDENDR 20 0 1 Unmodified _ALQLILDVLNPETSEDENDR_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1147.5708 2 1142.56879 2283.12303 56925.89 0.63272 0.00072293 -0.40563 -0.00046346 0.22709 0.00025947 1143.07030853533 1147.57062533 129.74 0.23233 129.74 129.63 129.86 0 48 11 7 0 0 0 0.00021339 1 84589 36.944 32.239 1 0.91761 0.94914 0 10312000 5397500 4915000 2136 1997 802 823 3338 3338 ALQLILDVLNPETSEDENDR 20 0 1 Unmodified _ALQLILDVLNPETSEDENDR_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1148.0778 2 1142.56879 2283.12303 56302.09 0.19795 0.00022618 0.18716 0.00021384 0.38511 0.00044002 1142.56882358031 1147.57254940058 129.37 0.23874 129.37 129.24 129.48 0 40 11 7 0 0 0 1.0848E-06 1 86428 77.527 68.706 1 0.79661 0.79504 0 8985200 4857300 4127900 2137 1997 802 823 3339 3339 ALQLILDVLNPETSEDENDRVVVTDDSDER 30 0 2 Unmodified _ALQLILDVLNPETSEDENDRVVVTDDSDER_ 0 0 1 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1141.2269 3 1133.88478 3398.63252 57292.29 0.38254 0.00043376 0.43689 0.00049538 0.81943 0.00092914 1134.21937437514 1141.22555340099 123.78 0.40001 123.78 123.58 123.98 0 144 27 8 0 0 0 3.6269E-07 1 82308 43.936 43.936 1 0.81183 0.85577 0 14278000 8095000 6183000 2138 1997 803 824 3340 3340 ALQLLQMYYEGR 12 0 1 Oxidation (M) _ALQLLQM(ox)YYEGR_ ALQLLQM(1)YYEGR ALQLLQM(117.67)YYEGR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.8797 2 750.879401 1499.74425 69629.45 0.63411 0.00047614 -0.12284 -9.224E-05 0.51127 0.0003839 750.879129892892 755.88347597492 96.998 0.8111 96.998 96.636 97.447 7.6294E-06 330 70 6 0 0 0 1.6562E-08 1 59073 117.67 117.67 1 1.2832 1.3585 0 41236000 20542000 20693000 2139 2023 804 825 3341 3341 1857 ALQLLQMYYEGR 12 0 1 Oxidation (M) _ALQLLQM(ox)YYEGR_ ALQLLQM(1)YYEGR ALQLLQM(101.95)YYEGR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.884 2 750.879401 1499.74425 67875.23 0.75606 0.00056771 -0.062019 -4.6569E-05 0.69405 0.00052114 750.879355133409 755.883578392579 97.966 0.88174 97.966 97.447 98.328 7.6294E-06 372 72 8 0 0 0 1.119E-05 3 59619 101.95 101.95 1 1.1374 1.2644 0 74581000 36045000 38536000 2140 2023 804 825 3342;3343;3344 3342 1857 ALQLLQMYYEGR 12 0 1 Oxidation (M) _ALQLLQM(ox)YYEGR_ ALQLLQM(1)YYEGR ALQLLQM(133.23)YYEGR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.8789 2 750.879401 1499.74425 69519.89 0.61101 0.00045879 0.029618 2.224E-05 0.64063 0.00048103 750.87920314436 755.883578401092 96.327 0.73505 96.327 95.916 96.651 -7.6294E-06 328 64 7 0 0 0 3.458E-13 2 59952 133.23 133.23 1 1.3024 1.5023 0 71769000 29362000 42407000 2141 2023 804 825 3345;3346 3345 1857 ALQLLQMYYEGR 12 0 1 Oxidation (M) _ALQLLQM(ox)YYEGR_ ALQLLQM(1)YYEGR ALQLLQM(141.93)YYEGR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.8843 2 750.879401 1499.74425 68090.68 0.92786 0.00069671 0.29473 0.00022131 1.2226 0.00091802 750.880984669617 755.883475241189 97.118 1.3176 97.118 96.675 97.993 0 409 104 8 0 0 0 3.9356E-18 2 60531 141.93 141.93 1 1.0924 1.2582 0 73518000 35712000 37807000 2142 2023 804 825 3347;3348 3348 1857 ALQLLQMYYEGR 12 0 1 Oxidation (M) _ALQLLQM(ox)YYEGR_ ALQLLQM(1)YYEGR ALQLLQM(104.22)YYEGR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.3812 2 750.879401 1499.74425 67903.47 0.83433 0.00062648 0.11657 8.7527E-05 0.95089 0.00071401 751.381283248633 755.883630136697 110.08 0.8116 110.08 109.55 110.36 0 220 42 8 0 0 0 8.8315E-06 1 63513 104.22 104.22 1 0.8296 0.67869 0 16209000 8475400 7733700 2143 2023 804 825 3349 3349 1857 ALQLLQMYYEGR 12 0 1 Oxidation (M) _ALQLLQM(ox)YYEGR_ ALQLLQM(1)YYEGR ALQLLQM(70.98)YYEGR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.8795 2 750.879401 1499.74425 67698.32 0.91091 0.00068398 -0.18356 -0.00013783 0.72735 0.00054615 750.879261178195 755.883486983239 110.77 0.7934 110.77 110.4 111.19 0 169 35 9 0 0 0 0.00021251 2 64111 70.977 70.977 1 0.86932 0.7116 0 13238000 6651000 6587300 2144 2023 804 825 3350;3351 3351 1857 ALQLLQMYYEGR 12 0 1 Oxidation (M) _ALQLLQM(ox)YYEGR_ ALQLLQM(1)YYEGR ALQLLQM(117.67)YYEGR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 750.879 2 750.879401 1499.74425 68382.64 0.71716 0.0005385 0.042904 3.2215E-05 0.76006 0.00057072 750.879178291546 755.883541671752 109.92 0.71936 109.92 109.53 110.25 7.6294E-06 173 36 7 0 0 0 1.6562E-08 1 62489 117.67 117.67 1 0.98881 0.82615 0 16213000 7452600 8760400 2145 2023 804 825 3352 3352 1857 ALQLLQMYYEGR 12 0 1 Oxidation (M) _ALQLLQM(ox)YYEGR_ ALQLLQM(1)YYEGR ALQLLQM(93.1)YYEGR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 750.8791 2 750.879401 1499.74425 67405.02 0.65856 0.0004945 -0.087366 -6.5601E-05 0.57119 0.0004289 750.879085333359 755.883490179743 110.66 0.88097 110.66 110.27 111.15 0 199 46 8 0 0 0 7.0737E-05 2 63059 93.096 93.096 1 0.81983 0.66906 0 12873000 6580600 6291900 2146 2023 804 825 3353;3354 3354 1857 ALQLLQMYYEGR 12 0 1 Unmodified _ALQLLQMYYEGR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.8823 2 742.881944 1483.74933 NaN NaN NaN 0.25879 0.00019225 NaN NaN NaN NaN 109.83 0.35572 109.83 109.65 110 0 0 0 0 0.0078295 1 68856 70.1 42.087 1 NaN NaN 0 3868100 3868100 0 2147 2023 804 826 3355 3355 ALQLLQMYYEGR 12 0 1 Unmodified _ALQLLQMYYEGR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.8815 2 742.881944 1483.74933 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.28 1 109.28 108.78 109.78 0 0 0 0 0.021715 1 70116 64.73 36.717 1 2148 2023 804 826 3356 3356 ALQLLQMYYEGR 12 0 1 Unmodified _ALQLLQMYYEGR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.8818 2 742.881944 1483.74933 69416.91 0.91879 0.00068255 0.359 0.00026669 1.2778 0.00094924 743.384295682313 747.88601828207 120.94 0.54303 120.94 120.77 121.31 7.6294E-06 156 25 9 0 0 0 7.1376E-13 2 71871 133.23 133.23 1 1.0511 0.8668 0 18595000 8474300 10121000 2149 2023 804 826 3357;3358 3358 ALQLLQMYYEGR 12 0 1 Unmodified _ALQLLQMYYEGR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.3867 2 742.881944 1483.74933 69515.99 0.82184 0.00061053 0.74982 0.00055703 1.5717 0.0011676 743.384542431912 747.886423003661 120.75 0.55954 120.75 120.55 121.11 7.6294E-06 156 25 9 0 0 0 4.6886E-08 2 70752 114.83 94.616 1 1.0583 0.87656 0 14956000 7550200 7405500 2150 2023 804 826 3359;3360 3359 ALQQEQEIEQR 11 0 1 Unmodified _ALQQEQEIEQR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30;A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A0U1RRM1;A0A024R7K7 A0A024R7K7 GATAD2B;GATAD2A Transcriptional repressor p66-beta;Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.3476 2 686.34678 1370.67901 72850.58 0.49834 0.00034203 -0.18638 -0.00012792 0.31196 0.00021411 686.346626661952 691.350888872276 28.997 0.30893 28.997 28.85 29.159 -1.9073E-06 91 15 9 0 0 0 1.3226E-79 2 13881 226.96 198.72 1 0.78156 0.91223 0 197030000 107570000 89458000 2151 229;591 805 827 3361;3362 3362 ALQQEQEIEQR 11 0 1 Unmodified _ALQQEQEIEQR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30;A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A0U1RRM1;A0A024R7K7 A0A024R7K7 GATAD2B;GATAD2A Transcriptional repressor p66-beta;Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3475 2 686.34678 1370.67901 73216.02 0.61852 0.00042452 0.12456 8.549E-05 0.74308 0.00051001 686.346589062627 691.351124520577 28.157 0.76408 28.157 28.076 28.84 0 173 58 7 0 0 0 1.2653E-112 3 13371 260.28 235.4 1 0.74742 0.85048 0 114150000 63053000 51093000 2152 229;591 805 827 3363;3364;3365 3363 ALQQEQEIEQR 11 0 1 Unmodified _ALQQEQEIEQR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30;A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A0U1RRM1;A0A024R7K7 A0A024R7K7 GATAD2B;GATAD2A Transcriptional repressor p66-beta;Transcriptional repressor p66-alpha MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.3528 2 686.34678 1370.67901 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.935 1 33.935 33.435 34.435 0 0 0 0 2.5746E-05 1 14938 89.171 35.42 1 2153 229;591 805 827 3366 3366 ALQQEQEIEQR 11 0 1 Unmodified _ALQQEQEIEQR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30;A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A0U1RRM1;A0A024R7K7 A0A024R7K7 GATAD2B;GATAD2A Transcriptional repressor p66-beta;Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 691.3511 2 686.34678 1370.67901 73628.77 0.50351 0.00034558 0.0016389 1.1249E-06 0.50515 0.00034671 686.346951989366 691.351001504704 34.009 0.71946 34.009 33.666 34.386 -3.8147E-06 225 61 6 0 0 0 0.00623 1 14623 54.784 26.579 1 1.8132 1.4972 0 8188300 2373100 5815200 2154 229;591 805 827 3367 3367 ALQQEQEIEQR 11 0 1 Unmodified _ALQQEQEIEQR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30;A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A0U1RRM1;A0A024R7K7 A0A024R7K7 GATAD2B;GATAD2A Transcriptional repressor p66-beta;Transcriptional repressor p66-alpha ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 691.8519 2 686.34678 1370.67901 NaN NaN NaN -0.11281 -7.7426E-05 NaN NaN NaN NaN 33.665 0.41147 33.665 33.45 33.861 0 0 0 0 0.037473 1 14190 47.971 25.633 1 NaN NaN 0 3508400 0 3508400 2155 229;591 805 827 3368 3368 ALQQGLVGLELK 12 1 0 Unmodified _ALQQGLVGLELK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8914 2 634.88227 1267.74999 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.671 1 96.671 96.171 97.171 0 0 0 0 0.00022704 1 58916 83.869 40.786 1 2156 397;1622 806 828 3369 3369 ALQQGLVGLELK 12 1 0 Unmodified _ALQQGLVGLELK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.8896 2 634.88227 1267.74999 NaN NaN NaN -0.33559 -0.00021306 NaN NaN NaN NaN 95.947 0.71198 95.947 95.72 96.432 0 0 0 0 0.0022453 1 59692 68.847 27.965 1 NaN NaN 0 17152000 0 17152000 2157 397;1622 806 828 3370 3370 ALQQGLVGLELK 12 1 0 Unmodified _ALQQGLVGLELK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.8893 2 634.88227 1267.74999 NaN NaN NaN -0.28169 -0.00017884 NaN NaN NaN NaN 109.92 0.45705 109.92 109.67 110.13 0 0 0 0 8.1278E-06 1 62495 103.88 44.633 1 NaN NaN 0 3533300 0 3533300 2158 397;1622 806 828 3371 3371 ALQQYTLEPSEK 12 1 0 Unmodified _ALQQYTLEPSEK_ 0 0 0 Q9Y678;B3KW21;Q8WUI6 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.869 2 703.861731 1405.70891 74140.63 0.84766 0.00059664 0.7039 0.00049545 1.5516 0.0010921 703.862299613298 707.869107587931 56.269 0.55228 56.269 56.088 56.64 0 153 48 6 0 0 0 1.0535E-12 2 31639 130.98 71.633 1 2.1736 2.2204 0 10473000 4423100 6050200 2159 2151 807 829 3372;3373 3372 ALQQYTLEPSEK 12 1 0 Unmodified _ALQQYTLEPSEK_ 0 0 0 Q9Y678;B3KW21;Q8WUI6 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.8701 2 703.861731 1405.70891 73433.63 0.50537 0.00035571 0.65381 0.0004602 1.1592 0.0008159 703.862217662908 707.869262386501 55.452 0.70092 55.452 55.153 55.854 0 164 50 5 0 0 0 4.62E-05 1 31703 98.943 51.34 1 2.0494 2.1085 0 11634000 4166300 7467600 2160 2151 807 829 3374 3374 ALQRPSAAAPQAENGPAAAPAVAAPAATEAPK 32 1 1 Unmodified _ALQRPSAAAPQAENGPAAAPAVAAPAATEAPK_ 0 0 1 Q15020;B4DYA2 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 995.8644 3 989.187854 2964.54173 NaN NaN NaN 0.04627 4.577E-05 NaN NaN NaN NaN 67.638 0.33584 67.638 67.495 67.831 0 0 0 0 1.2223E-06 2 39125 44.267 32.071 1 NaN NaN 0 10899000 0 10899000 2161 1748 808 830 3375;3376 3376 ALQRPSAAAPQAENGPAAAPAVAAPAATEAPK 32 1 1 Unmodified _ALQRPSAAAPQAENGPAAAPAVAAPAATEAPK_ 0 0 1 Q15020;B4DYA2 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 995.5311 3 989.187854 2964.54173 NaN NaN NaN -0.012924 -1.2784E-05 NaN NaN NaN NaN 66.598 0.26257 66.598 66.486 66.748 0 0 0 0 5.77E-18 2 39356 68.96 61.684 1 NaN NaN 0 9952800 0 9952800 2162 1748 808 830 3377;3378 3378 ALQSGQCAGAALDVFTEEPPR 21 0 1 Unmodified _ALQSGQCAGAALDVFTEEPPR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1114.038 2 1109.03387 2216.05318 NaN NaN NaN -0.24097 -0.00026725 NaN NaN NaN NaN 102.3 0.33395 102.3 102.17 102.51 0 0 0 0 0.00047035 1 62944 46.746 39.456 1 NaN NaN 0 4445900 0 4445900 2163 1382 809 831 3379 3379 ALQSGQCAGAALDVFTEEPPRDR 23 0 2 Unmodified _ALQSGQCAGAALDVFTEEPPRDR_ 0 0 1 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.4014 3 830.067688 2487.18124 66869.21 0.5949 0.00049381 -0.19429 -0.00016127 0.40061 0.00033253 830.401740694682 837.0738522089 88.327 0.85217 88.327 87.952 88.804 -7.6294E-06 287 66 8 0 0 0 1.1686E-09 3 53306 78.378 74.28 1 3.0011 3.2626 0 46001000 9494600 36507000 2164 1382 810 832 3380;3381;3382 3382 ALQSGQCAGAALDVFTEEPPRDR 23 0 2 Unmodified _ALQSGQCAGAALDVFTEEPPRDR_ 0 0 1 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.74 3 830.067688 2487.18124 66785.34 0.70731 0.00058711 -0.10547 -8.7551E-05 0.60183 0.00049956 830.402217698575 837.073889048229 87.381 0.82365 87.381 86.993 87.817 0 323 66 7 0 0 0 2.4137E-09 4 53641 73.389 73.389 1 2.8905 3.2938 0 40204000 9877800 30326000 2165 1382 810 832 3383;3384;3385;3386 3383 ALQSGQCAGAALDVFTEEPPRDR 23 0 2 Unmodified _ALQSGQCAGAALDVFTEEPPRDR_ 0 0 1 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.0731 3 830.067688 2487.18124 NaN NaN NaN -0.90283 -0.00074941 NaN NaN NaN NaN 101.22 0.91678 101.22 100.84 101.76 0 0 0 0 5.0009E-05 1 57235 50.827 43.467 1 NaN NaN 0 5465100 0 5465100 2166 1382 810 832 3387 3387 ALQSGQCAGAALDVFTEEPPRDR 23 0 2 Unmodified _ALQSGQCAGAALDVFTEEPPRDR_ 0 0 1 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 837.074 3 830.067688 2487.18124 66799.52 0.56954 0.00047276 -0.39764 -0.00033007 0.1719 0.00014269 830.401592078863 837.073966814833 101.02 0.85851 101.02 100.67 101.53 0 345 56 9 0 0 0 1.7411E-08 3 56285 60.747 60.747 1 1.8583 1.6953 0 8095700 2957800 5137900 2167 1382 810 832 3388;3389;3390 3390 ALQSVGQIVGEVLK 14 1 0 Unmodified _ALQSVGQIVGEVLK_ 0 0 0 V9HW24;A0A087X2I1;P62333;H0YJC0;H0YJE9;H0YJT1 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.9338 2 720.924666 1439.83478 71586.02 1.0857 0.00078273 0.3837 0.00027662 1.4694 0.0010594 720.925657291922 724.932042830219 118.57 0.64973 118.57 118.28 118.93 0 170 37 7 0 0 0 3.4823E-06 1 76007 102.4 102.4 1 2.152 2.2978 0 32143000 9702200 22441000 2168 454 811 833 3391 3391 ALQSVGQIVGEVLK 14 1 0 Unmodified _ALQSVGQIVGEVLK_ 0 0 0 V9HW24;A0A087X2I1;P62333;H0YJC0;H0YJE9;H0YJT1 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.9256 2 720.924666 1439.83478 72149.07 0.83212 0.0005999 1.9261 0.0013886 2.7583 0.0019885 720.925931255693 724.931794680559 118.13 1.3863 118.13 117.24 118.63 0 266 88 7 0 0 0 3.3166E-09 3 77553 113.22 102.4 1 2.4655 2.7708 0 73604000 23396000 50209000 2169 454 811 833 3392;3393;3394 3393 ALQSVGQIVGEVLK 14 1 0 Unmodified _ALQSVGQIVGEVLK_ 0 0 0 V9HW24;A0A087X2I1;P62333;H0YJC0;H0YJE9;H0YJT1 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.9253 2 720.924666 1439.83478 NaN NaN NaN 0.44151 0.0003183 NaN NaN NaN NaN 131.55 0.40143 131.55 131.34 131.75 0 0 0 0 1.8751E-06 1 79858 101.6 51.782 1 NaN NaN 0 2646300 2646300 0 2170 454 811 833 3395 3395 ALQSYYEAK 9 1 0 Unmodified _ALQSYYEAK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.7696 2 536.769114 1071.52368 83575.45 0.69652 0.00037387 0.24514 0.00013158 0.94166 0.00050545 536.769296430453 540.776442872165 37.081 0.51068 37.081 36.849 37.359 0 194 45 6 0 0 0 0.0036023 1 18770 71.379 33.821 1 0.94104 1.0161 0 34878000 19489000 15389000 2171 2008;393 812 834 3396 3396 ALQSYYEAK 9 1 0 Unmodified _ALQSYYEAK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.7765 2 536.769114 1071.52368 82014.95 0.76762 0.00041203 -0.059268 -3.1813E-05 0.70835 0.00038022 537.270617090403 540.77615799762 36.224 0.55668 36.224 35.924 36.481 0 176 48 6 0 0 0 0.00079176 2 18520 94.302 45.741 1 1.0561 1.139 0 38107000 20477000 17631000 2172 2008;393 812 834 3397;3398 3398 ALQSYYEAK 9 1 0 Unmodified _ALQSYYEAK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.7759 2 536.769114 1071.52368 84884.01 0.49751 0.00026705 -0.27163 -0.0001458 0.22588 0.00012124 536.769141416537 540.776231386868 42.7 0.74176 42.7 42.346 43.087 0 211 50 6 0 0 0 0.0028653 2 19929 73.248 30.002 1 1.4607 1.1694 0 7228600 2904800 4323800 2173 2008;393 812 834 3399;3400 3399 ALQSYYEAK 9 1 0 Unmodified _ALQSYYEAK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.7692 2 536.769114 1071.52368 84651.02 0.20923 0.00011231 -0.022247 -1.1942E-05 0.18698 0.00010037 536.769197559681 540.77622514911 42.852 0.72513 42.852 42.523 43.248 -3.8147E-06 199 43 6 0 0 0 0.0028653 2 19520 73.248 30.002 1 1.5358 1.2581 0 8642500 3266000 5376500 2174 2008;393 812 834 3401;3402 3402 ALQTQNSEIVK 11 1 0 Unmodified _ALQTQNSEIVK_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.838 2 615.838059 1229.66157 77370.9 0.29089 0.00017914 0.13136 8.0895E-05 0.42224 0.00026003 615.8380581053 619.845316444272 33.19 0.45474 33.19 32.962 33.417 0 146 41 5 0 0 0 2.7741E-12 1 16548 138.4 104.01 1 1.1834 1.1921 0 27876000 12231000 15645000 2175 2143 813 835 3403 3403 ALQYFHPK 8 1 0 Unmodified _ALQYFHPK_ 0 0 0 Q9H9L3 Q9H9L3 Q9H9L3 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.278 2 502.271627 1002.5287 85912.32 0.028131 1.413E-05 -0.38198 -0.00019186 -0.35385 -0.00017773 502.271183549808 506.278590572709 39.831 0.29568 39.831 39.678 39.973 0 75 22 5 0 0 0 0.063473 1 17701 38.836 38.836 1 1.7054 1.3447 0 2296300 699920 1596400 2176 2046 814 836 3404 3404 ALRPPTSPGVFGALQNFK 18 1 1 Unmodified _ALRPPTSPGVFGALQNFK_ 0 0 1 O75151;Q8N359;B4DH04 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3544 3 634.019499 1899.03667 74346.27 0.6163 0.00039075 0.75015 0.00047561 1.3665 0.00086636 634.354146604791 640.027215941591 104.09 0.66946 104.09 103.71 104.38 0 135 56 5 0 0 0 1.8256E-05 1 65994 51.76 45.856 1 0.98784 1.1037 0 11668000 6214400 5453300 2177 1400 815 837 3405 3405 ALRPPTSPGVFGALQNFK 18 1 1 Unmodified _ALRPPTSPGVFGALQNFK_ 0 0 1 O75151;Q8N359;B4DH04 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.0269 3 634.019499 1899.03667 76286.91 0.82526 0.00052323 -0.38618 -0.00024485 0.43908 0.00027839 634.019188726251 640.026400190261 115.75 0.57947 115.75 115.45 116.03 0 105 26 6 0 0 0 4.3861E-06 2 66847 80.361 80.361 1 1.6509 1.3828 0 5578900 2575900 3003000 2178 1400 815 837 3406;3407 3406 ALSAIADLLTNEHER 15 0 1 Unmodified _ALSAIADLLTNEHER_ 0 0 0 Q7KZJ3;A0A024R4Z0;Q96FS1;Q68DU0;C9JZR2;O60716;A0A024R4Y7 Q7KZJ3 Q7KZJ3 CTNND1;DKFZp781O2021 Catenin delta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.9596 3 551.624926 1651.85295 83034.14 0.58768 0.00032418 0.099079 5.4654E-05 0.68676 0.00037883 551.62493795447 554.961029589439 100.5 0.58282 100.5 100.23 100.82 0 139 45 5 0 0 0 0.028833 1 61576 13.791 13.791 1 1.0143 1.0141 0 16479000 8009900 8468900 2179 165 816 838 3408 3408 ALSAIADLLTNEHER 15 0 1 Unmodified _ALSAIADLLTNEHER_ 0 0 0 Q7KZJ3;A0A024R4Z0;Q96FS1;Q68DU0;C9JZR2;O60716;A0A024R4Y7 Q7KZJ3 Q7KZJ3 CTNND1;DKFZp781O2021 Catenin delta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.9587 3 551.624926 1651.85295 84426.99 0.74665 0.00041187 0.051593 2.846E-05 0.79825 0.00044033 551.62483261723 554.960955357526 112.72 0.28204 112.72 112.58 112.86 7.6294E-06 45 13 5 0 0 0 0.05617 1 65486 10.658 10.658 1 0.7373 0.63958 0 2450400 1172900 1277500 2180 165 816 838 3409 3409 ALSAVSAQAAAAQK 14 1 0 Unmodified _ALSAVSAQAAAAQK_ 0 0 0 A0A0G2JRY5;O00268;V9GY14 A0A0G2JRY5 A0A0G2JRY5 TAF4 Transcription initiation factor TFIID subunit 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.8578 2 643.856783 1285.69901 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.288 1 38.288 37.788 38.788 0 0 0 0 0.011387 1 19632 50.452 27.712 1 2181 535 817 839 3410 3410 ALSAVSAQAAAAQK 14 1 0 Unmodified _ALSAVSAQAAAAQK_ 0 0 0 A0A0G2JRY5;O00268;V9GY14 A0A0G2JRY5 A0A0G2JRY5 TAF4 Transcription initiation factor TFIID subunit 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.8558 2 643.856783 1285.69901 NaN NaN NaN -0.29219 -0.00018813 NaN NaN NaN NaN 37.336 0.25956 37.336 37.25 37.51 0 0 0 0 0.00027926 1 19418 82.029 62.242 1 NaN NaN 0 5079000 5079000 0 2182 535 817 839 3411 3411 ALSGTSPDDVQPGPSVGPPSK 21 1 0 Unmodified _ALSGTSPDDVQPGPSVGPPSK_ 0 0 0 A0A075B797;M0R3B2;A8K670;Q9Y314 A0A075B797 A0A075B797 NOSIP Nitric oxide synthase-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1001.507 2 996.997276 1991.98 NaN NaN NaN -0.13201 -0.00013161 NaN NaN NaN NaN 61.506 0.27216 61.506 61.322 61.594 0 0 0 0 0.0093039 1 35963 37.594 31.751 1 NaN NaN 0 5000900 0 5000900 2183 398 818 840 3412 3412 ALSHILQTPIEIIQADSPPIIVGEEYSK 28 1 0 Unmodified _ALSHILQTPIEIIQADSPPIIVGEEYSK_ 0 0 0 A0A087X0W9;Q8N6M0 A0A087X0W9 A0A087X0W9 OTUD6B OTU domain-containing protein 6B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1024.2263 3 1021.22005 3060.63832 61466.55 0.46436 0.00047421 -0.34741 -0.00035478 0.11695 0.00011943 1021.554268086 1023.89148457214 132.95 0.15842 132.95 132.86 133.02 0 37 6 9 0 0 0 4.5485E-11 1 86945 59.372 59.372 1 2.9049 3.0154 0 11368000 2486500 8881200 2184 446 819 841 3413 3413 ALSHILQTPIEIIQADSPPIIVGEEYSK 28 1 0 Unmodified _ALSHILQTPIEIIQADSPPIIVGEEYSK_ 0 0 0 A0A087X0W9;Q8N6M0 A0A087X0W9 A0A087X0W9 OTUD6B OTU domain-containing protein 6B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1024.5598 3 1021.22005 3060.63832 62553.89 0.63471 0.00064817 -0.030923 -3.1579E-05 0.60378 0.0006166 1021.88954426875 1024.22567534714 132.91 0.1562 132.91 132.81 132.96 0 53 8 10 0 0 0 2.729E-16 2 89112 69.952 69.952 1 3.5737 3.6675 0 17747000 3940800 13806000 2185 446 819 841 3414;3415 3415 ALSIVESEQDK 11 1 0 Unmodified _ALSIVESEQDK_ 0 0 0 Q6PGP7 Q6PGP7 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.8217 2 609.81425 1217.61395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.652 1 46.652 46.152 47.152 0 0 0 0 0.0028994 1 25802 67.563 16.685 1 2186 1855 820 842 3416 3416 ALSLAR 6 0 1 Unmodified _ALSLAR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0;O14729;O14794;Q68D89;Q66K75;Q2PS10;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH11;DKFZp686D10126;MYH10 Myosin-9;Myosin-11;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 315.7002 2 315.700306 629.38606 106897.8 0.064102 2.0237E-05 0.0045998 1.4522E-06 0.068701 2.1689E-05 315.700221829097 320.704353350223 30.878 0.37405 30.878 30.686 31.06 0 127 33 6 0 0 0 0.031538 1 15118 128 20.855 1 1.688 1.9124 0 106300000 36836000 69465000 2187 81;1544 821 843 3417 3417 ALSLLSLPPK 10 1 0 Unmodified _ALSLLSLPPK_ 0 0 0 Q4VC44;I3L188 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.839 2 519.831517 1037.64848 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.84 1 103.84 103.34 104.34 7.6294E-06 0 0 0 0.01279 1 64102 56.434 25.13 1 2188 1781 822 844 3418 3418 ALSLLSLPPK 10 1 0 Unmodified _ALSLLSLPPK_ 0 0 0 Q4VC44;I3L188 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.8318 2 519.831517 1037.64848 88669.39 0.54157 0.00028152 -0.25114 -0.00013055 0.29043 0.00015098 519.831328397943 523.838525490479 103.03 0.50577 103.03 102.78 103.28 0 101 39 4 0 0 0 0.004316 1 64985 61.679 52.906 1 0.79597 0.79768 0 6818000 2758700 4059400 2189 1781 822 844 3419 3419 ALSLLSLPPK 10 1 0 Unmodified _ALSLLSLPPK_ 0 0 0 Q4VC44;I3L188 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.8393 2 519.831517 1037.64848 88174.06 0.646 0.00033581 -0.16108 -8.3734E-05 0.48492 0.00025208 519.831182193492 523.838634895298 115.93 1.6003 115.93 115.04 116.64 0 164 71 4 0 0 0 0.034405 1 67713 41.029 41.029 1 1.1425 0.96565 0 2003200 1015600 987580 2190 1781 822 844 3420 3420 ALSLLTLLNVYQK 13 1 0 Unmodified _ALSLLTLLNVYQK_ 0 0 0 A0A024R363;A0A087X0F1;Q9UK61 A0A024R363;Q9UK61 A0A024R363 C3orf63;FAM208A Protein FAM208A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.445 2 738.445234 1474.87592 NaN NaN NaN 0.084293 6.2246E-05 NaN NaN NaN NaN 133.36 0.23982 133.36 133.22 133.46 0 0 0 0 7.0944E-07 1 87349 127.4 74.608 1 NaN NaN 0 6706600 6706600 0 2191 129;2105 823 845 3421 3421 ALSLLTLLNVYQK 13 1 0 Unmodified _ALSLLTLLNVYQK_ 0 0 0 A0A024R363;A0A087X0F1;Q9UK61 A0A024R363;Q9UK61 A0A024R363 C3orf63;FAM208A Protein FAM208A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.4526 2 738.445234 1474.87592 74005.3 0.89492 0.00066085 -0.091736 -6.7742E-05 0.80318 0.00059311 738.445292265676 742.452102014744 133.18 0.37007 133.18 132.93 133.3 0 48 13 5 0 0 0 1.0579E-08 2 89248 114.5 114.5 1 1.0445 1.0763 0 9608300 5652400 3955900 2192 129;2105 823 845 3422;3423 3422 ALSNLESIPGGYNALR 16 0 1 Unmodified _ALSNLESIPGGYNALR_ 0 0 0 D3DVA8;A0A024R258;B4DZF6;B3KNI8;B3KNI2;Q59F94;Q9UMX0;Q9NRR5;H0YDS0;Q59FJ2 D3DVA8 D3DVA8 UBQLN4;UBQLN1 Ubiquilin-1;Ubiquilin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 842.9501 2 837.944118 1673.87368 70053.96 0.81754 0.00068506 -0.11239 -9.4173E-05 0.70516 0.00059088 837.943497432525 842.94868451194 97.654 0.42081 97.654 97.481 97.902 0 84 34 4 0 0 0 0.0078919 2 59552 34.685 34.685 1 1.1651 1.1562 0 8334300 2937600 5396700 2193 105 824 846 3424;3425 3424 ALSNLESIPGGYNALR 16 0 1 Unmodified _ALSNLESIPGGYNALR_ 0 0 0 D3DVA8;A0A024R258;B4DZF6;B3KNI8;B3KNI2;Q59F94;Q9UMX0;Q9NRR5;H0YDS0;Q59FJ2 D3DVA8 D3DVA8 UBQLN4;UBQLN1 Ubiquilin-1;Ubiquilin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.4503 2 837.944118 1673.87368 67820.59 1.1282 0.00094534 -0.33695 -0.00028234 0.79122 0.000663 837.94337667577 842.94856601588 97.038 0.55167 97.038 96.763 97.315 0 102 43 4 0 0 0 0.017522 2 60485 29.936 29.807 1 1.4388 1.4549 0 9699900 4594300 5105600 2194 105 824 846 3426;3427 3426 ALSPLEEWLR 10 0 1 Unmodified _ALSPLEEWLR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;A0A140T954;A2ABF4;A0A0G2JJT9;A0A140T904 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.8358 2 607.332413 1212.65027 78264.31 0.64108 0.00038935 0.51481 0.00031266 1.1559 0.00070201 607.332503937478 612.336614716871 116.1 0.98154 116.1 115.47 116.45 0 186 64 6 0 0 0 0.00076493 2 73921 81.594 75.004 1 0.72484 0.75784 0 13090000 7697000 5392600 2195 363 825 847 3428;3429 3429 ALSPLEEWLR 10 0 1 Unmodified _ALSPLEEWLR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;A0A140T954;A2ABF4;A0A0G2JJT9;A0A140T904 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.3329 2 607.332413 1212.65027 79255.4 0.76476 0.00046446 2.1375 0.0012982 2.9023 0.0017627 607.332571386624 612.33737073874 127.81 0.95477 127.81 127.33 128.28 0 82 37 5 0 0 0 0.049193 1 76997 36.334 31.883 1 0.46235 0.40984 0 1245600 827580 418030 2196 363 825 847 3430 3430 ALSPLEEWLR 10 0 1 Unmodified _ALSPLEEWLR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;A0A140T954;A2ABF4;A0A0G2JJT9;A0A140T904 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.3322 2 607.332413 1212.65027 80724.85 0.64486 0.00039164 1.617 0.00098203 2.2618 0.0013737 607.332940265965 612.337187542855 127.57 0.60751 127.57 127.26 127.87 -7.6294E-06 76 24 5 0 0 0 0.021656 1 75929 46.158 46.158 1 0.53632 0.46586 0 1585600 852140 733460 2197 363 825 847 3431 3431 ALSSDSILSPAPDAR 15 0 1 Unmodified _ALSSDSILSPAPDAR_ 0 0 0 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.8915 2 750.388645 1498.76274 NaN NaN NaN 0.48964 0.00036742 NaN NaN NaN NaN 76.073 0.29874 76.073 75.999 76.298 7.6294E-06 0 0 0 0.0028907 1 44865 61.815 40.352 1 NaN NaN 0 4140300 4140300 0 2198 1892 826 848 3432 3432 ALSSLELSSHLAK 13 1 0 Unmodified _ALSSLELSSHLAK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.5887 3 452.589153 1354.74563 88473.57 0.0098192 4.4441E-06 0.11914 5.392E-05 0.12896 5.8364E-05 452.589168710279 455.260435617385 67.284 1.0021 67.284 66.768 67.77 0 355 80 10 0 0 0 0.00027366 2 38761 46.481 36.838 1 0.88004 0.99143 0 125120000 62035000 63087000 2199 1995 827 849 3433;3434 3434 ALSSLELSSHLAK 13 1 0 Unmodified _ALSSLELSSHLAK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.3878 2 678.380091 1354.74563 73613.02 0.44539 0.00030214 0.35648 0.00024183 0.80187 0.00054397 678.380105561686 682.387310128848 67.231 0.60889 67.231 66.937 67.546 0 274 47 8 0 0 0 1.8788E-38 2 38773 176.48 176.48 1 0.84922 0.96125 0 88338000 46707000 41631000 2200 1995 827 849 3435;3436 3436 ALSSLELSSHLAK 13 1 0 Unmodified _ALSSLELSSHLAK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.8888 2 678.380091 1354.74563 73033.66 0.6006 0.00040743 -0.059153 -4.0128E-05 0.54144 0.00036731 678.379685502533 682.387225766017 65.57 0.6482 65.57 65.197 65.845 0 284 53 8 0 0 0 4.2161E-39 2 38579 185.77 185.77 1 0.83326 0.93118 0 95135000 52533000 42602000 2201 1995 827 849 3437;3438 3438 ALSSLELSSHLAK 13 1 0 Unmodified _ALSSLELSSHLAK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.5891 3 452.589153 1354.74563 89002.22 0.15612 7.066E-05 0.17613 7.9717E-05 0.33226 0.00015038 452.589132237642 455.260454820033 65.551 0.79729 65.551 65.171 65.969 0 333 66 8 0 0 0 0.00023932 2 38577 47.915 47.915 1 0.88759 1.0053 0 136190000 71904000 64282000 2202 1995 827 849 3439;3440 3440 ALSSLELSSHLAK 13 1 0 Unmodified _ALSSLELSSHLAK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 452.589 3 452.589153 1354.74563 87795.66 0.066962 3.0306E-05 -0.040742 -1.8439E-05 0.02622 1.1867E-05 452.589134088686 455.260405750376 76.785 0.91859 76.785 76.534 77.452 0 251 60 10 0 0 0 0.0075783 2 40914 31.215 27.035 1 1.593 1.3044 0 35486000 13925000 21561000 2203 1995 827 849 3441;3442 3442 ALSSLELSSHLAK 13 1 0 Unmodified _ALSSLELSSHLAK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.3879 2 678.380091 1354.74563 72513.61 0.4781 0.00032434 0.16895 0.00011461 0.64705 0.00043895 678.380079938212 682.387162482428 76.775 0.57713 76.775 76.521 77.099 0 204 34 9 0 0 0 9.4251E-24 1 40890 157.97 157.97 1 1.5623 1.2839 0 38549000 15003000 23546000 2204 1995 827 849 3443 3443 ALSSLELSSHLAK 13 1 0 Unmodified _ALSSLELSSHLAK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.3874 2 678.380091 1354.74563 71487.18 0.53768 0.00036475 0.19413 0.00013169 0.73181 0.00049644 678.379788618785 682.387246602176 76.974 0.93881 76.974 76.404 77.343 0 271 64 8 0 0 0 7.6128E-06 2 40163 103.08 103.08 1 1.5711 1.2868 0 27011000 11630000 15381000 2205 1995 827 849 3444;3445 3444 ALSSLELSSHLAK 13 1 0 Unmodified _ALSSLELSSHLAK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 452.589 3 452.589153 1354.74563 88645.36 -0.021359 -9.6669E-06 0.27772 0.00012569 0.25636 0.00011603 452.589205099086 455.260553340148 76.912 0.65886 76.912 76.636 77.295 0 256 43 8 0 0 0 0.022354 1 40180 18.731 18.731 1 1.5336 1.2353 0 22921000 8879500 14041000 2206 1995 827 849 3446 3446 ALSSSADDASLVNASISSSVK 21 1 0 Unmodified _ALSSSADDASLVNASISSSVK_ 0 0 0 B4DSL6;A8K5D9;A0A024RA49;Q9NQW6 B4DSL6 B4DSL6 ANLN Actin-binding protein anillin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1009.0146 2 1005.0053 2007.99604 NaN NaN NaN 0.96436 0.00096919 NaN NaN NaN NaN 86.9 0.23853 86.9 86.768 87.006 0 0 0 0 6.2442E-18 1 53553 95.57 85.244 1 NaN NaN 0 7056300 0 7056300 2207 294 828 850 3447 3447 ALSSSVIR 8 0 1 Unmodified _ALSSSVIR_ 0 0 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.747 2 416.747985 831.481417 93213.26 0.32124 0.00013388 -0.17776 -7.4082E-05 0.14348 5.9794E-05 416.747765821233 421.752030044866 37.09 0.49931 37.09 36.805 37.305 0 146 44 5 0 0 0 0.010479 1 18777 72.138 38.4 1 0.90374 0.95757 0 41529000 20715000 20814000 2208 1927 829 851 3448 3448 ALSSSVIR 8 0 1 Unmodified _ALSSSVIR_ 0 0 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.7476 2 416.747985 831.481417 93449.56 0.38202 0.00015921 0.14595 6.0825E-05 0.52797 0.00022003 416.747683610935 421.752237772606 36.162 0.53257 36.162 35.914 36.446 0 158 46 6 0 0 0 0.0050709 3 18563 91.626 45.256 1 0.94735 1.0353 0 36685000 20120000 16564000 2209 1927 829 851 3449;3450;3451 3451 ALSVYGLPIR 10 0 1 Unmodified _ALSVYGLPIR_ 0 0 0 A0A0A8K8C0;Q9H6W3 A0A0A8K8C0 A0A0A8K8C0 URLC2;NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.8268 2 544.826766 1087.63898 85228.61 0.7355 0.00040072 0.26177 0.00014262 0.99726 0.00054334 544.826669607374 549.830975093659 101.44 0.66321 101.44 101.07 101.73 0 134 51 4 0 0 0 0.00054054 1 62414 85.212 68.436 1 0.59488 0.61994 0 5140500 3104700 2035800 2210 497 830 852 3452 3452 ALTALFK 7 1 0 Unmodified _ALTALFK_ 0 0 0 Q9UBB4;Q7Z524 Q9UBB4 Q9UBB4 ATXN10 Ataxin-10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 382.239 2 382.239264 762.463976 NaN NaN NaN -0.34712 -0.00013268 NaN NaN NaN NaN 76.532 0.14318 76.532 76.453 76.596 0 0 0 0 0.047335 1 45074 59.641 24.535 1 NaN NaN 0 1185400 1185400 0 2211 2095 831 853 3453 3453 ALTALGLAVPR 11 0 1 Unmodified _ALTALGLAVPR_ 0 0 0 Q9BVQ7 Q9BVQ7 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.3442 2 541.340041 1080.66553 84303.82 0.71496 0.00038704 -0.49774 -0.00026945 0.21722 0.00011759 541.339640835813 546.34402032544 98.966 0.68126 98.966 98.683 99.364 -7.6294E-06 122 54 4 0 0 0 7.8779E-08 2 60510 112.84 78.589 1 0.70553 0.72511 0 6411000 3531000 2879900 2212 2009 832 854 3454;3455 3454 ALTALGLAVPR 11 0 1 Unmodified _ALTALGLAVPR_ 0 0 0 Q9BVQ7 Q9BVQ7 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.3448 2 541.340041 1080.66553 84217.67 0.66657 0.00036084 -0.33143 -0.00017942 0.33513 0.00018142 541.339620115021 546.344209368099 98.194 0.64639 98.194 97.883 98.53 7.6294E-06 112 57 4 0 0 0 2.0681E-08 1 61364 122.13 81.106 1 0.72452 0.71912 0 11954000 7535000 4419100 2213 2009 832 854 3456 3456 ALTALGLAVPR 11 0 1 Unmodified _ALTALGLAVPR_ 0 0 0 Q9BVQ7 Q9BVQ7 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.3406 2 541.340041 1080.66553 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.033 1 98.033 97.533 98.533 0 0 0 0 2.0891E-06 1 61300 101.54 63.984 1 2214 2009 832 854 3457 3457 ALTALGLAVPR 11 0 1 Unmodified _ALTALGLAVPR_ 0 0 0 Q9BVQ7 Q9BVQ7 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.8427 2 541.340041 1080.66553 NaN NaN NaN -0.88148 -0.00047718 NaN NaN NaN NaN 111.86 0.27077 111.86 111.7 111.97 0 0 0 0 0.0023105 1 64899 75.825 52.396 1 NaN NaN 0 732600 732600 0 2215 2009 832 854 3458 3458 ALTEPEAR 8 0 1 Unmodified _ALTEPEAR_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;Q58A51 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.7387 2 443.735074 885.455596 91357.49 0.058717 2.6055E-05 0.080152 3.5566E-05 0.13887 6.1621E-05 443.735033421481 448.739286657319 22.974 0.4244 22.974 22.786 23.211 1.9073E-06 77 21 6 0 0 0 0.01993 1 8973 58.815 18.712 1 1.0249 1.0726 0 12804000 6865500 5938900 2216 1604 833 855 3459 3459 ALTHLEMR 8 0 1 Oxidation (M) _ALTHLEM(ox)R_ ALTHLEM(1)R ALTHLEM(72.49)R 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.7581 2 493.758027 985.5015 85837.44 0.21985 0.00010855 0.41214 0.0002035 0.63199 0.00031205 493.758051996088 498.762461931335 21.23 0.65903 21.23 20.763 21.422 0 85 30 5 0 0 0 0.0050026 1 7596 72.492 46.874 1 1.0489 1.0937 0 38476000 19925000 18551000 2217 168 834 856 3460 3460 140 ALTHLEMR 8 0 1 Oxidation (M) _ALTHLEM(ox)R_ ALTHLEM(1)R ALTHLEM(60.12)R 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.7583 2 493.758027 985.5015 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.817 1 20.817 20.317 21.317 -1.9073E-06 0 0 0 0.016415 1 7072 60.118 39.493 1 2218 168 834 856 3461 3461 140 ALTLGALTLPLAR 13 0 1 Unmodified _ALTLGALTLPLAR_ 0 0 0 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8 B3KY56 B3KY56 FAM62A;ESYT1 Extended synaptotagmin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.4182 2 655.413737 1308.81292 75787.93 1.0193 0.00066805 -0.13778 -9.0302E-05 0.88151 0.00057775 655.413573962363 660.417765268833 124.53 0.46568 124.53 124.34 124.8 7.6294E-06 146 31 6 0 0 0 5.1087E-09 2 80790 120.09 120.09 1 1.6859 1.7654 0 12628000 5208600 7419800 2219 320 835 857 3462;3463 3462 ALTLGALTLPLAR 13 0 1 Unmodified _ALTLGALTLPLAR_ 0 0 0 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8 B3KY56 B3KY56 FAM62A;ESYT1 Extended synaptotagmin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.418 2 655.413737 1308.81292 75912.93 0.96353 0.00063151 0.10309 6.7566E-05 1.0666 0.00069908 655.413731757292 660.417861372336 124.13 0.44611 124.13 123.87 124.32 0 135 30 6 0 0 0 3.8549E-06 1 82399 107.83 107.83 1 1.5918 1.561 0 13948000 5308300 8639600 2220 320 835 857 3464 3464 ALTQFPLPK 9 1 0 Unmodified _ALTQFPLPK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.8106 2 507.80276 1013.59097 85358.95 0.50748 0.0002577 0.13462 6.8358E-05 0.64209 0.00032606 507.802628793074 511.810035874301 98.571 0.57742 98.571 98.258 98.836 0 135 35 6 0 0 0 0.0049428 2 54758 67.981 67.981 1 1.4165 1.1394 0 2499700 995380 1504300 2221 122 836 858 3465;3466 3465 ALTQTGGPHVK 11 1 0 Unmodified _ALTQTGGPHVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.8171 2 554.809105 1107.60366 82229.4 0.27679 0.00015356 0.56298 0.00031235 0.83977 0.00046591 554.809368053346 558.816493462876 19.392 0.35357 19.392 19.196 19.549 0 43 13 6 0 0 0 0.00035655 2 5824 99.257 66.416 1 1.4933 1.6192 0 22184000 9228500 12955000 2222 1504 837 859 3467;3468 3467 ALTSEIALLQSR 12 0 1 Unmodified _ALTSEIALLQSR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;B7Z4L4;B4DNJ5 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3746 2 651.374809 1300.73507 75335.63 0.85561 0.00055732 0.71817 0.0004678 1.5738 0.0010251 651.374284858915 656.881974505282 96.681 0.65431 96.681 96.212 96.867 0 261 56 6 0 0 0 0.00013806 3 60219 93.561 93.561 1 1.826 1.9588 0 25338000 9418900 15919000 2223 1444 838 860 3469;3470;3471 3470 ALTSEIALLQSR 12 0 1 Unmodified _ALTSEIALLQSR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;B7Z4L4;B4DNJ5 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3749 2 651.374809 1300.73507 NaN NaN NaN 0.85387 0.00055619 NaN NaN NaN NaN 110.55 0.37264 110.55 110.34 110.71 0 0 0 0 0.0023135 1 63837 68.069 40.327 1 NaN NaN 0 2353400 2353400 0 2224 1444 838 860 3472 3472 ALTSEIALLQSR 12 0 1 Unmodified _ALTSEIALLQSR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;B7Z4L4;B4DNJ5 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.3769 2 651.374809 1300.73507 NaN NaN NaN 0.46799 0.00030483 NaN NaN NaN NaN 110.31 0.42357 110.31 110.1 110.53 0 0 0 0 0.0054314 1 62783 62.166 35.051 1 NaN NaN 0 1807000 1807000 0 2225 1444 838 860 3473 3473 ALTVAHELLCNKPEEEK 17 2 0 Unmodified _ALTVAHELLCNKPEEEK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.3415 3 661.006819 1979.99863 72629.69 0.64235 0.0004246 0.38432 0.00025404 1.0267 0.00067864 661.341474749428 666.349998524906 64.976 0.472 64.976 64.77 65.242 0 188 36 6 0 0 0 3.2282E-05 2 33560 70.235 70.235 1 1.1623 0.99979 0 6517200 2831700 3685500 2226 836;1683 839 861 3474;3475 3475 ALTVPELTQQMFDAK 15 1 0 Oxidation (M) _ALTVPELTQQM(ox)FDAK_ ALTVPELTQQM(1)FDAK ALTVPELTQQM(105.2)FDAK 0 1 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q8IZ29;P04350;Q9BV28 Q8IZ29 TUBB2C;TUBB4B;TUBB4A;TUBB3 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 858.4429 2 854.434738 1706.85492 63928.28 0.93847 0.00080186 -0.0021026 -1.7966E-06 0.93637 0.00080006 854.435096856452 858.442098482723 98.208 0.60169 98.208 98.059 98.661 0 305 49 9 0 0 0 1.7743E-07 2 60075 105.2 16.426 1 2.6298 2.9383 0 63072000 17051000 46021000 2227 1660;1441;502 840 862 3476;3477 3477 346 ALTVPELTQQMFDAK 15 1 0 Oxidation (M) _ALTVPELTQQM(ox)FDAK_ ALTVPELTQQM(1)FDAK ALTVPELTQQM(105.2)FDAK 0 1 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q8IZ29;P04350;Q9BV28 Q8IZ29 TUBB2C;TUBB4B;TUBB4A;TUBB3 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.4432 2 854.434738 1706.85492 63821.32 0.61655 0.00052681 0.19323 0.0001651 0.80978 0.00069191 854.936688002529 858.442177437301 97.48 0.70207 97.48 97.325 98.028 0 295 55 8 0 0 0 1.7743E-07 2 60958 105.2 14.291 1 2.6234 2.9491 0 73014000 20256000 52758000 2228 1660;1441;502 840 862 3478;3479 3479 346 ALTVPELTQQMFDAK 15 1 0 Unmodified _ALTVPELTQQMFDAK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q8IZ29;P04350;Q9BV28 Q8IZ29 TUBB2C;TUBB4B;TUBB4A;TUBB3 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.4462 2 846.43728 1690.86001 67210.7 1.0615 0.0008985 -0.33199 -0.00028101 0.72951 0.00061749 846.436153771548 850.44440114925 115.85 0.43893 115.85 115.64 116.08 0 127 29 6 0 0 0 1.3111E-05 1 75600 90.653 90.653 1 1.4491 1.4869 0 17735000 6046900 11688000 2229 1660;1441;502 840 863 3480 3480 ALTVPELTQQMFDAK 15 1 0 Unmodified _ALTVPELTQQMFDAK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q8IZ29;P04350;Q9BV28 Q8IZ29 TUBB2C;TUBB4B;TUBB4A;TUBB3 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 850.4459 2 846.43728 1690.86001 NaN NaN NaN 0.56033 0.00047428 NaN NaN NaN NaN 128.35 0.53659 128.35 128.09 128.62 0 0 0 0 0.046749 1 77614 37.426 17.664 1 NaN NaN 0 5073400 0 5073400 2230 1660;1441;502 840 863 3481 3481 ALTVPELTQQMFDAK 15 1 0 Unmodified _ALTVPELTQQMFDAK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q8IZ29;P04350;Q9BV28 Q8IZ29 TUBB2C;TUBB4B;TUBB4A;TUBB3 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 850.4453 2 846.43728 1690.86001 64956.78 0.83168 0.00070397 0.85352 0.00072245 1.6852 0.0014264 846.438195737953 850.445559319286 128.14 1.0661 128.14 127.71 128.78 0 167 44 9 0 0 0 5.7507E-07 1 76499 100.93 100.93 1 1.7128 1.4125 0 11002000 4470300 6531900 2231 1660;1441;502 840 863 3482 3482 ALTVPELTQQMFDSK 15 1 0 Unmodified _ALTVPELTQQMFDSK_ 0 0 0 Q13885;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q13885 Q13885 TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 854.9365 2 854.434738 1706.85492 63928.28 0.93847 0.00080186 -0.0021026 -1.7966E-06 0.93637 0.00080006 854.435096856452 858.442098482723 98.208 0.60169 98.208 98.059 98.661 0 305 49 9 0 0 0 0.014837 1 60253 33.225 1.2164 1 2.6298 2.9383 0 63072000 17051000 46021000 2232 1723 841 864 3483 3483 ALTVPELTQQMFDSK 15 1 0 Unmodified _ALTVPELTQQMFDSK_ 0 0 0 Q13885;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q13885 Q13885 TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 858.4442 2 854.434738 1706.85492 65731.4 0.87921 0.00075123 0.33847 0.0002892 1.2177 0.0010404 854.435857085927 858.442020332554 111.24 0.45512 111.24 111.01 111.47 7.6294E-06 78 19 7 0 0 0 0.014359 1 64450 33.409 0 1 0.74371 0.58195 0 3852800 2176700 1676100 2233 1723 841 864 3484 3484 ALTVPELTQQMFDSK 15 1 0 Unmodified _ALTVPELTQQMFDSK_ 0 0 0 Q13885;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q13885 Q13885 TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta-2A chain;Tubulin beta-2B chain ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.441 2 854.434738 1706.85492 NaN NaN NaN -1.1532 -0.00098534 NaN NaN NaN NaN 111.1 0.4229 111.1 110.88 111.3 0 0 0 0 0.035117 1 63351 39.625 0.84221 1 NaN NaN 0 1782500 0 1782500 2234 1723 841 864 3485 3485 ALTVPELTQQVFDAK 15 1 0 Unmodified _ALTVPELTQQVFDAK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8 Q5JP53 Q5JP53 TUBB;XTP3TPATP1 Tubulin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.4522 2 830.451245 1658.88794 67017.14 0.66362 0.0005511 0.16379 0.00013602 0.8274 0.00068712 830.451667869998 834.458453929293 115.41 1.0946 115.41 115.01 116.1 0 394 70 8 0 0 0 5.1279E-22 2 73366 144.1 127.85 1 1.5246 1.8288 0 1026500000 407250000 619290000 2235 1452 842 865 3486;3487 3487 ALTVPELTQQVFDAK 15 1 0 Unmodified _ALTVPELTQQVFDAK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8 Q5JP53 Q5JP53 TUBB;XTP3TPATP1 Tubulin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.4564 2 830.451245 1658.88794 67042.35 0.95897 0.00079637 -0.083147 -6.905E-05 0.87582 0.00072732 830.451535460623 834.45825486065 114.83 0.80592 114.83 114.53 115.33 7.6294E-06 301 51 7 0 0 0 2.1296E-10 2 74598 119.76 119.76 1 1.5093 1.7825 0 1152100000 454610000 697460000 2236 1452 842 865 3488;3489 3488 ALTVPELTQQVFDAK 15 1 0 Unmodified _ALTVPELTQQVFDAK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8 Q5JP53 Q5JP53 TUBB;XTP3TPATP1 Tubulin beta chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 830.4523 2 830.451245 1658.88794 65944.8 0.61043 0.00050693 -0.41577 -0.00034528 0.19466 0.00016166 830.451729499013 834.458535245851 127.3 0.99809 127.3 126.86 127.86 0 292 41 11 0 0 0 2.4144E-15 2 76599 132.32 116.43 1 1.175 1.0387 0 295490000 137180000 158310000 2237 1452 842 865 3490;3491 3491 ALTVPELTQQVFDAK 15 1 0 Unmodified _ALTVPELTQQVFDAK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8 Q5JP53 Q5JP53 TUBB;XTP3TPATP1 Tubulin beta chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 834.4596 2 830.451245 1658.88794 66137.77 0.73355 0.00060918 -0.67971 -0.00056447 0.053835 4.4708E-05 830.45166708605 834.458430196525 127.11 0.95647 127.11 126.69 127.65 7.6294E-06 300 42 11 0 0 0 0.00021022 2 75554 75.819 75.819 1 1.2278 1.0581 0 184560000 84275000 100290000 2238 1452 842 865 3492;3493 3493 ALVADSHPESER 12 0 1 Unmodified _ALVADSHPESER_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8296 2 655.820398 1309.62624 74986.15 0.46329 0.00030384 -0.34052 -0.00022332 0.12278 8.0519E-05 655.819780166277 660.824125267725 20.567 0.27592 20.567 20.432 20.708 0 35 12 5 0 0 0 2.6269E-05 3 6936 100.48 92.551 1 2.0611 2.0669 0 9101500 2801000 6300500 2239 415 843 866 3494;3495;3496 3495 ALVADSHPESER 12 0 1 Unmodified _ALVADSHPESER_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.825 2 655.820398 1309.62624 74575.51 0.7091 0.00046504 0.29047 0.0001905 0.99957 0.00065554 655.820669497676 660.824296866363 20.425 0.27458 20.425 20.324 20.599 1.9073E-06 23 8 5 0 0 0 0.0002168 1 6730 88.948 49.644 1 1.9936 1.9616 0 13360000 4821100 8538800 2240 415 843 866 3497 3497 ALVADSHPESER 12 0 1 Unmodified _ALVADSHPESER_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.8855 3 437.549357 1309.62624 90597.95 0.20671 9.0446E-05 0.090709 3.969E-05 0.29742 0.00013014 437.549378545899 440.885289514088 20.437 0.50428 20.437 20.324 20.829 0 30 15 5 0 0 0 0.0060513 1 6752 33.204 11.573 1 1.7998 1.9488 0 27349000 9223500 18125000 2241 415 843 866 3498 3498 ALVADSHPESER 12 0 1 Unmodified _ALVADSHPESER_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 440.8854 3 437.549357 1309.62624 89354.74 -0.38595 -0.00016887 1.039 0.0004546 0.65302 0.00028573 437.549296772139 440.885676105518 22.226 0.35168 22.226 22.061 22.413 0 47 12 6 0 0 0 0.0054541 1 7033 34.179 19.303 1 6.4127 5.3854 0 3118800 387900 2730900 2242 415 843 866 3499 3499 ALVADSHPESER 12 0 1 Unmodified _ALVADSHPESER_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.8252 2 655.820398 1309.62624 NaN NaN NaN 0.78027 0.00051172 NaN NaN NaN NaN 22.227 0.37842 22.227 22.061 22.439 -1.9073E-06 0 0 0 0.0029977 1 7050 66.595 43.276 1 NaN NaN 0 1428800 0 1428800 2243 415 843 866 3500 3500 ALVADSHPESER 12 0 1 Unmodified _ALVADSHPESER_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 440.8853 3 437.549357 1309.62624 88970.66 -0.31378 -0.00013729 0.77604 0.00033956 0.46227 0.00020226 437.549311506525 440.885531267906 22.148 0.27211 22.148 22.007 22.279 0 39 10 6 0 0 0 0.0054541 1 6565 34.179 19.303 1 5.7924 5.2298 0 2096000 208740 1887300 2244 415 843 866 3501 3501 ALVATPGK 8 1 0 Unmodified _ALVATPGK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;Q9BQ02;C9JYW2;C9JLB1;C9J1H7;C9JWL1 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 378.7343 2 378.734346 755.454139 96474.23 -0.048462 -1.8354E-05 0.16333 6.186E-05 0.11487 4.3506E-05 378.734277268381 382.741458738423 28.382 0.58176 28.382 28.119 28.7 0 155 38 6 0 0 0 0.0015211 2 13412 108.24 49.577 1 1.0967 1.2447 0 160400000 80724000 79680000 2245 151 844 867 3502;3503 3503 ALVATPGK 8 1 0 Unmodified _ALVATPGK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;Q9BQ02;C9JYW2;C9JLB1;C9J1H7;C9JWL1 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 382.7413 2 378.734346 755.454139 97264.3 0.0085091 3.2227E-06 0.072135 2.732E-05 0.080644 3.0543E-05 378.734353299132 382.741325346723 27.799 0.53253 27.799 27.524 28.056 0 130 30 7 0 0 0 0.0019305 2 12992 104.45 49.923 1 0.96925 1.1004 0 141520000 74172000 67347000 2246 151 844 867 3504;3505 3504 ALVATPGKK 9 2 0 Unmodified _ALVATPGKK_ 0 0 1 B3KTP9;A0A024R4A0;P19338;Q9BQ02;C9JYW2;C9JLB1;C9J1H7;C9JWL1 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.7816 2 442.781828 883.549102 90042.68 -0.036912 -1.6344E-05 0.36242 0.00016047 0.32551 0.00014413 442.781842928042 450.796138864677 20.15 0.29319 20.15 20.001 20.295 0 38 8 7 0 0 0 0.00082117 1 6601 98.523 66.053 1 1.0267 1.2121 0 48492000 25222000 23269000 2247 151 845 868 3506 3506 ALVATPGKK 9 2 0 Unmodified _ALVATPGKK_ 0 0 1 B3KTP9;A0A024R4A0;P19338;Q9BQ02;C9JYW2;C9JLB1;C9J1H7;C9JWL1 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 442.782 2 442.781828 883.549102 89502.17 -0.34897 -0.00015452 0.21322 9.4408E-05 -0.13575 -6.0108E-05 442.781804218267 450.796001507292 20.917 0.34161 20.917 20.766 21.108 0 65 16 7 0 0 0 0.026909 1 5690 54.205 29.206 1 0.47762 0.41134 0 3318100 2192400 1125700 2248 151 845 868 3507 3507 ALVAVLLSR 9 0 1 Unmodified _ALVAVLLSR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.3104 2 471.310752 940.606951 90527.32 0.29861 0.00014074 0.049556 2.3356E-05 0.34817 0.00016409 471.310703481171 476.314880390869 98.388 0.70687 98.388 97.971 98.678 0 166 61 4 0 0 0 0.017976 1 61480 52.482 52.482 1 1.6053 1.6078 0 17167000 5711300 11455000 2249 1205 846 869 3508 3508 ALVAYYQK 8 1 0 Unmodified _ALVAYYQK_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2661 2 478.26601 954.517468 87847.34 0.35898 0.00017169 0.085568 4.0924E-05 0.44455 0.00021261 478.265969524795 482.273062688891 45.131 1.4658 45.131 44.357 45.823 0 613 129 8 0 0 0 0.001718 2 24186 124.32 46.604 1 0.96813 1.1464 0 446140000 224600000 221540000 2250 1636 847 870 3509;3510 3510 ALVAYYQK 8 1 0 Unmodified _ALVAYYQK_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2729 2 478.26601 954.517468 86989.38 0.34703 0.00016597 -0.0048719 -2.3301E-06 0.34216 0.00016364 478.266011210805 482.272943670951 44.237 1.0587 44.237 43.918 44.976 0 496 89 9 0 0 0 0.0029241 2 24052 98.415 23.698 1 1.0487 1.2367 0 750360000 370650000 379720000 2251 1636 847 870 3511;3512 3511 ALVAYYQK 8 1 0 Unmodified _ALVAYYQK_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.2657 2 478.26601 954.517468 87747.7 -0.073944 -3.5365E-05 0.46767 0.00022367 0.39373 0.00018831 478.266119179824 482.273214992816 51.997 1.3184 51.997 51.413 52.732 -3.8147E-06 474 107 7 0 0 0 0.028561 1 25650 59.205 20.967 1 0.87999 0.72084 0 35807000 18463000 17344000 2252 1636 847 870 3513 3513 ALVAYYQK 8 1 0 Unmodified _ALVAYYQK_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.2661 2 478.26601 954.517468 87483.02 0.12221 5.845E-05 0.1638 7.834E-05 0.28601 0.00013679 478.265985038993 482.273075295362 52.291 1.1286 52.291 51.707 52.836 -3.8147E-06 456 87 8 0 0 0 0.014233 2 25202 70.268 21.764 1 0.91458 0.75471 0 30632000 15986000 14646000 2253 1636 847 870 3514;3515 3515 ALVDGPCTQVR 11 0 1 Unmodified _ALVDGPCTQVR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.3116 2 608.311155 1214.60776 74059.09 0.61529 0.00037429 -0.22959 -0.00013967 0.3857 0.00023462 608.311234262045 613.315140466201 46.743 1.1724 46.743 46.337 47.509 0 647 104 9 0 0 0 7.3983E-08 2 25145 133.23 89.419 1 0.80468 0.95627 0 1074000000 595030000 478960000 2254 645;725 848 871 3516;3517 3517 ALVDGPCTQVR 11 0 1 Unmodified _ALVDGPCTQVR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.3118 2 608.311155 1214.60776 73815.8 0.52438 0.00031898 -0.20174 -0.00012272 0.32264 0.00019627 608.311361996927 613.315175842833 45.689 1.0115 45.689 45.333 46.344 0 584 84 12 0 0 0 8.6137E-05 2 24965 115.71 86.565 1 0.7866 0.92956 0 1433400000 807680000 625680000 2255 645;725 848 871 3518;3519 3519 ALVDGPCTQVR 11 0 1 Unmodified _ALVDGPCTQVR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.7938 2 608.311155 1214.60776 78375.45 0.72772 0.00044268 -0.96631 -0.00058782 -0.23859 -0.00014514 608.31127023663 613.314596069477 44.406 0.47915 44.406 44.098 44.577 -3.8147E-06 138 42 5 0 0 0 0.039649 1 24219 57.532 11.56 1 0.75348 0.75538 0 18000000 9667100 8332400 2256 645;725 848 871 3520 3520 ALVDGPCTQVR 11 0 1 Unmodified _ALVDGPCTQVR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.3158 2 608.311155 1214.60776 74964.16 0.47328 0.0002879 -0.27218 -0.00016557 0.2011 0.00012233 608.311301180085 613.315176547574 53.692 1.4789 53.692 53.344 54.822 0 654 109 11 0 0 0 0.0035925 2 26564 61.78 37.456 1 0.86168 0.74584 0 134320000 72010000 62313000 2257 645;725 848 871 3521;3522 3521 ALVDGPCTQVR 11 0 1 Unmodified _ALVDGPCTQVR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.3115 2 608.311155 1214.60776 73311.47 0.35641 0.00021681 -0.041944 -2.5515E-05 0.31447 0.00019129 608.311410569196 613.315298267054 54.132 1.2137 54.132 53.771 54.985 0 593 90 10 0 0 0 0.0014323 3 26219 70.056 36.506 1 0.86579 0.75586 0 115370000 60612000 54753000 2258 645;725 848 871 3523;3524;3525 3524 ALVDHENVISCPHLGASTK 19 1 0 Unmodified _ALVDHENVISCPHLGASTK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.7648 4 512.761195 2047.01567 NaN NaN NaN 0.39819 0.00020418 NaN NaN NaN NaN 60.642 0.7145 60.642 60.174 60.888 3.8147E-06 0 0 0 0.002561 1 34626 38.915 22.777 1 NaN NaN 0 21267000 0 21267000 2259 1382 849 872 3526 3526 ALVDHENVISCPHLGASTK 19 1 0 Unmodified _ALVDHENVISCPHLGASTK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.0156 4 512.761195 2047.01567 84535.95 0.40912 0.00020978 -0.16297 -8.3564E-05 0.24615 0.00012621 512.761283117626 514.764570527212 58.186 0.69023 58.186 57.812 58.502 0 223 52 7 0 0 0 0.00014795 1 33782 48.315 48.315 1 3.1789 3.435 0 38425000 10156000 28269000 2260 1382 849 872 3527 3527 ALVDHENVISCPHLGASTK 19 1 0 Unmodified _ALVDHENVISCPHLGASTK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.0176 3 683.345834 2047.01567 74594.35 0.53683 0.00036684 -0.27086 -0.00018509 0.26597 0.00018175 683.346500358831 686.351115006229 68.996 0.35271 68.996 68.83 69.183 0 88 25 5 0 0 0 0.036969 1 35285 15.521 15.521 1 2.0652 1.6766 0 2862400 773360 2089100 2261 1382 849 872 3528 3528 ALVDILSEVSK 11 1 0 Unmodified _ALVDILSEVSK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.3391 2 587.339904 1172.66525 78937.41 0.92657 0.00054421 -0.077369 -4.5442E-05 0.8492 0.00049877 587.339816743957 591.346843667067 113.69 0.66869 113.69 113.3 113.97 0 281 48 8 0 0 0 0.00041914 2 71758 79.974 70.268 1 0.90298 1.0233 0 92394000 50100000 42294000 2262 1997 850 873 3529;3530 3529 ALVDILSEVSK 11 1 0 Unmodified _ALVDILSEVSK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8409 2 587.339904 1172.66525 78919.77 0.7281 0.00042764 -0.019067 -1.1199E-05 0.70903 0.00041644 587.339794333984 591.34692779964 113.05 0.70367 113.05 112.74 113.44 0 276 47 8 0 0 0 0.0014091 2 73080 76.282 76.282 1 0.94324 1.0562 0 82432000 40528000 41905000 2263 1997 850 873 3531;3532 3531 ALVDILSEVSK 11 1 0 Unmodified _ALVDILSEVSK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 591.3474 2 587.339904 1172.66525 78831.38 0.70244 0.00041257 0.35859 0.00021061 1.061 0.00062318 587.340048501776 591.347089462717 124.76 0.78606 124.76 124.46 125.25 0 207 35 8 0 0 0 0.01328 3 74686 60.064 60.064 1 1.0513 0.84392 0 21355000 10015000 11340000 2264 1997 850 873 3533;3534;3535 3533 ALVDILSEVSK 11 1 0 Unmodified _ALVDILSEVSK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.3401 2 587.339904 1172.66525 79406.61 0.69053 0.00040558 0.17449 0.00010248 0.86502 0.00050806 587.339927000419 591.346982954581 124.62 0.68417 124.62 124.33 125.01 7.6294E-06 192 32 8 0 0 0 0.017726 2 73679 50.194 50.194 1 1.048 0.83911 0 20731000 10084000 10646000 2265 1997 850 873 3536;3537 3537 ALVDPGPDFVVCDEGHILK 19 1 0 Unmodified _ALVDPGPDFVVCDEGHILK_ 0 0 0 A4LAA3;P46100;B4DHH8;H0Y3T0 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.684 3 694.350585 2080.02993 72453.13 0.51338 0.00035647 0.89525 0.00062162 1.4086 0.00097808 694.685265897111 697.69079825577 103.38 0.7087 103.38 103.13 103.84 0 228 59 6 0 0 0 0.022614 1 65343 19.292 19.292 1 0.74221 0.76068 0 31896000 17360000 14536000 2266 672 851 874 3538 3538 ALVDPGPDFVVCDEGHILK 19 1 0 Unmodified _ALVDPGPDFVVCDEGHILK_ 0 0 0 A4LAA3;P46100;B4DHH8;H0Y3T0 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.3512 3 694.350585 2080.02993 73699.59 0.80081 0.00055604 -0.30308 -0.00021044 0.49773 0.0003456 694.350140140019 697.356166233556 115.28 0.38786 115.28 115.08 115.46 -7.6294E-06 100 16 8 0 0 0 0.00017734 1 67509 38.417 38.417 1 1.2399 0.99614 0 7872500 3369700 4502900 2267 672 851 874 3539 3539 ALVDPGPDFVVCDEGHILK 19 1 0 Unmodified _ALVDPGPDFVVCDEGHILK_ 0 0 0 A4LAA3;P46100;B4DHH8;H0Y3T0 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.3511 3 694.350585 2080.02993 73103.27 0.64071 0.00044488 -0.16381 -0.00011374 0.4769 0.00033114 694.685051410421 697.356235515221 115.08 0.40205 115.08 114.91 115.31 0 106 19 8 0 0 0 0.00016304 2 66475 39.385 39.385 1 1.1917 0.97204 0 6432900 3024100 3408900 2268 672 851 874 3540;3541 3541 ALVEFESNPEETREPGSPPSVQR 23 0 2 Unmodified _ALVEFESNPEETREPGSPPSVQR_ 0 0 1 Q9H6F5;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 859.4259 3 852.417263 2554.22996 65836.97 0.69798 0.00059497 0.30155 0.00025705 0.99953 0.00085201 852.751333998764 859.424896243236 73.045 0.46555 73.045 72.858 73.324 0 220 40 7 0 0 0 2.4049E-09 2 42835 73.405 60.278 1 0.36683 0.39869 0 42210000 32129000 10081000 2269 2037 852 875 3542;3543 3543 ALVEFESNPEETREPGSPPSVQR 23 0 2 Unmodified _ALVEFESNPEETREPGSPPSVQR_ 0 0 1 Q9H6F5;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.4181 3 852.417263 2554.22996 65301.82 0.73802 0.0006291 -0.21612 -0.00018422 0.5219 0.00044488 852.750987906838 859.424618044352 71.914 0.47623 71.914 71.657 72.134 0 198 41 7 0 0 0 4.8474E-13 2 43062 98.703 98.703 1 0.38728 0.4448 0 54639000 38823000 15816000 2270 2037 852 875 3544;3545 3544 ALVEFESNPEETREPGSPPSVQR 23 0 2 Unmodified _ALVEFESNPEETREPGSPPSVQR_ 0 0 1 Q9H6F5;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 852.4179 3 852.417263 2554.22996 66067.45 0.56702 0.00048333 0.1582 0.00013485 0.72522 0.00061819 852.751426900967 859.424287341253 83.632 0.5631 83.632 83.385 83.949 0 204 42 10 0 0 0 7.1583E-06 2 45524 45.395 45.395 1 0.16295 0.13617 0 15084000 12479000 2604500 2271 2037 852 875 3546;3547 3546 ALVEFESNPEETREPGSPPSVQR 23 0 2 Unmodified _ALVEFESNPEETREPGSPPSVQR_ 0 0 1 Q9H6F5;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 852.7516 3 852.417263 2554.22996 NaN NaN NaN -0.13529 -0.00011532 NaN NaN NaN NaN 83.684 0.49371 83.684 83.486 83.98 -7.6294E-06 0 0 0 0.00011948 1 44754 44.632 33.575 1 NaN NaN 0 11291000 11291000 0 2272 2037 852 875 3548 3548 ALVELLR 7 0 1 Unmodified _ALVELLR_ 0 0 0 D3DVA5;V9GYM8;Q92974 D3DVA5 D3DVA5 ARHGEF2 Rho guanine nucleotide exchange factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 407.7609 2 407.263271 812.511988 99095.61 0.25561 0.0001041 -3.1846 -0.001297 -2.929 -0.0011929 407.263082205861 412.267876697342 84.927 0.49435 84.927 84.691 85.185 0 102 40 5 0 0 0 0.026711 1 50929 76.847 19.383 1 1.1195 1.1482 0 6516600 2759700 3756900 2273 1197 853 876 3549 3549 ALVFQPVAELK 11 1 0 Unmodified _ALVFQPVAELK_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;B4E162;A0A0S2Z4A8;Q7KYX9;Q7Z683 A0A024R0Y5 A0A024R0Y5 PFKM;DKFZp779O048 ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.8688 2 607.860806 1213.70706 78075.5 0.66095 0.00040176 0.35997 0.00021881 1.0209 0.00062058 607.861078309087 611.86801760405 114.95 0.43411 114.95 114.73 115.16 7.6294E-06 73 20 5 0 0 0 0.0058056 1 67292 55.549 55.549 1 1.8714 1.4518 0 3519800 1120400 2399400 2274 61 854 877 3550 3550 ALVLDCHYPEDEVGQEDEAESDIFSIR 27 0 1 Unmodified _ALVLDCHYPEDEVGQEDEAESDIFSIR_ 0 0 0 A8K651;Q07021;I3L3Q7;I3L3B0 A8K651 A8K651 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1050.1462 3 1046.13991 3135.39789 60507.41 0.453 0.0004739 -0.021777 -2.2782E-05 0.43122 0.00045112 1046.47454115206 1049.80994466574 112.52 0.42189 112.52 112.29 112.71 0 147 30 7 0 0 0 0.00060793 1 70932 27.09 26.049 1 1.4742 1.5426 0 12848000 6151100 6696400 2275 756 855 878 3551 3551 ALVLDCHYPEDEVGQEDEAESDIFSIR 27 0 1 Unmodified _ALVLDCHYPEDEVGQEDEAESDIFSIR_ 0 0 0 A8K651;Q07021;I3L3Q7;I3L3B0 A8K651 A8K651 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1049.8101 3 1046.13991 3135.39789 61774.45 0.85852 0.00089813 -0.308 -0.00032221 0.55051 0.00057592 1046.47411558674 1049.81008661948 111.94 0.45143 111.94 111.69 112.14 -7.6294E-06 164 32 9 0 0 0 4.3173E-16 1 72267 69.152 69.152 1 1.8897 1.8607 0 14531000 5294000 9236900 2276 756 855 878 3552 3552 ALVLNGK 7 1 0 Unmodified _ALVLNGK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 361.7364 2 357.729064 713.443575 101649.7 0.28247 0.00010105 0.090283 3.2297E-05 0.37275 0.00013334 357.728948649973 361.736137593792 31.546 0.28822 31.546 31.393 31.681 0 78 26 4 0 0 0 0.026742 1 15524 77.72 24.534 1 1.0803 1.0684 0 19320000 10100000 9220000 2277 716 856 879 3553 3553 ALVMLLEVR 9 0 1 Oxidation (M) _ALVM(ox)LLEVR_ ALVM(1)LLEVR ALVM(56.73)LLEVR 0 1 0 A0A024RAM0;Q92973;B4DRY5;A0A024R7F7;Q4LE60;B3KPC8;A0A075B780;Q05D48;O14787 A0A024RAM0 A0A024RAM0 TNPO1;TNPO2;TNPO2 variant protein Transportin-1;Transportin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.3194 2 530.315177 1058.6158 NaN NaN NaN 0.4696 0.00024904 NaN NaN NaN NaN 103.07 0.6774 103.07 102.64 103.32 -7.6294E-06 0 0 0 0.0070847 1 63417 56.729 31.807 1 NaN NaN 0 6864300 0 6864300 2278 309 857 880 3554 3554 225 ALVMLLEVR 9 0 1 Oxidation (M) _ALVM(ox)LLEVR_ ALVM(1)LLEVR ALVM(67.99)LLEVR 0 1 0 A0A024RAM0;Q92973;B4DRY5;A0A024R7F7;Q4LE60;B3KPC8;A0A075B780;Q05D48;O14787 A0A024RAM0 A0A024RAM0 TNPO1;TNPO2;TNPO2 variant protein Transportin-1;Transportin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.3198 2 530.315177 1058.6158 NaN NaN NaN 0.15334 8.1318E-05 NaN NaN NaN NaN 102.2 0.61129 102.2 101.84 102.45 7.6294E-06 0 0 0 0.0026577 1 64271 67.993 42.256 1 NaN NaN 0 7139900 0 7139900 2279 309 857 880 3555 3555 225 ALVNCQYSSATFSTGER 17 0 1 Unmodified _ALVNCQYSSATFSTGER_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.9374 2 945.936164 1889.85778 64521.18 0.1079 0.00010206 0.12079 0.00011426 0.22868 0.00021632 946.438203054395 950.940620273645 69.862 0.45973 69.862 69.632 70.092 0 132 41 5 0 0 0 5.0766E-10 1 40667 111.79 111.79 1 0.80547 0.84235 0 13015000 6451400 6563200 2280 2056 858 881 3556 3556 ALVNCQYSSATFSTGER 17 0 1 Unmodified _ALVNCQYSSATFSTGER_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 950.9409 2 945.936164 1889.85778 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.038 1 70.038 69.538 70.538 0 0 0 0 0.00010773 1 40727 80.469 63.936 1 2281 2056 858 881 3557 3557 ALVNCQYSSATFSTGER 17 0 1 Unmodified _ALVNCQYSSATFSTGER_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.9355 2 945.936164 1889.85778 63765.87 0.50211 0.00047496 0.16954 0.00016038 0.67165 0.00063534 945.936557826379 950.940789055738 68.774 0.41339 68.774 68.618 69.031 0 117 36 5 0 0 0 2.7543E-05 1 40861 82.202 82.202 1 0.76739 0.76612 0 16761000 8992400 7768700 2282 2056 858 881 3558 3558 ALVNCQYSSATFSTGER 17 0 1 Unmodified _ALVNCQYSSATFSTGER_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 950.941 2 945.936164 1889.85778 62264.41 0.36225 0.00034266 -0.025722 -2.4331E-05 0.33653 0.00031833 945.936254848342 950.940573635257 80.229 0.67004 80.229 79.853 80.523 0 202 44 6 0 0 0 0.00017006 2 43317 65.805 52.605 1 1.0156 0.87037 0 6125300 2961800 3163600 2283 2056 858 881 3559;3560 3560 ALVNCQYSSATFSTGER 17 0 1 Unmodified _ALVNCQYSSATFSTGER_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 946.438 2 945.936164 1889.85778 62607.7 0.50143 0.00047432 -0.2285 -0.00021615 0.27293 0.00025817 946.437690955903 951.441580646637 80.527 0.58553 80.527 80.218 80.803 0 194 39 6 0 0 0 7.708E-05 2 42646 64.104 60.571 1 1.0936 0.90958 0 6089000 3079800 3009300 2284 2056 858 881 3561;3562 3561 ALVQNDTLLQVK 12 1 0 Unmodified _ALVQNDTLLQVK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3917 2 671.390459 1340.76637 74462.82 0.54518 0.00036603 0.20042 0.00013456 0.7456 0.00050059 671.390739014209 675.397570677778 83.566 0.93307 83.566 83.246 84.179 7.6294E-06 519 76 10 0 0 0 6.2824E-18 2 50038 143.89 127.76 1 0.93086 1.1022 0 444110000 238970000 205140000 2285 1946 859 882 3563;3564 3564 ALVQNDTLLQVK 12 1 0 Unmodified _ALVQNDTLLQVK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3912 2 671.390459 1340.76637 74299.43 0.66838 0.00044875 -0.030372 -2.0391E-05 0.63801 0.00042835 671.390709570166 675.397408106618 82.475 0.90811 82.475 82.237 83.145 7.6294E-06 533 76 10 0 0 0 7.1919E-18 2 50454 142.92 118.05 1 0.91632 1.0805 0 719200000 374280000 344920000 2286 1946 859 882 3565;3566 3566 ALVQNDTLLQVK 12 1 0 Unmodified _ALVQNDTLLQVK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.3978 2 671.390459 1340.76637 73976.47 0.78387 0.00052629 -0.17478 -0.00011735 0.60909 0.00040894 671.3905824679 675.397286377726 95.85 1.1463 95.85 95.472 96.618 0 365 75 7 0 0 0 0.00020607 3 53609 81.338 81.338 1 0.64764 0.56574 0 175310000 111960000 63348000 2287 1946 859 882 3567;3568;3569 3568 ALVQNDTLLQVK 12 1 0 Unmodified _ALVQNDTLLQVK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.3979 2 671.390459 1340.76637 74230.41 0.44273 0.00029725 0.12131 8.1444E-05 0.56404 0.00037869 671.390735311525 675.397427443165 95.67 1.3521 95.67 95.11 96.462 0 553 91 10 0 0 0 7.3469E-06 3 52704 109.29 109.29 1 0.64116 0.54893 0 121350000 74095000 47257000 2288 1946 859 882 3570;3571;3572 3571 ALVTGYFMQVAHLER 15 0 1 Oxidation (M) _ALVTGYFM(ox)QVAHLER_ ALVTGYFM(1)QVAHLER ALVTGYFM(73.16)QVAHLER 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.9733 3 584.303018 1749.88723 79544.78 0.77411 0.00045232 -0.20489 -0.00011972 0.56922 0.0003326 584.302974183957 587.97339812562 98.835 1.1758 98.834 98.372 99.548 -7.6294E-06 242 96 6 0 0 0 5.7272E-05 2 60362 73.156 51.002 1 2.1351 2.1526 0 15634000 4383400 11250000 2289 1379 860 883 3573;3574 3573 1042 ALVTGYFMQVAHLER 15 0 1 Oxidation (M) _ALVTGYFM(ox)QVAHLER_ ALVTGYFM(1)QVAHLER ALVTGYFM(79.65)QVAHLER 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3038 3 584.303018 1749.88723 79973.48 0.46282 0.00027043 0.44039 0.00025732 0.90322 0.00052775 584.303185422724 587.639874022462 97.815 0.67353 97.815 97.387 98.06 7.6294E-06 233 53 6 0 0 0 3.7131E-05 1 61016 79.652 79.652 1 1.9941 2.0518 0 21308000 11048000 10260000 2290 1379 860 883 3575 3575 1042 ALVTGYFMQVAHLER 15 0 1 Unmodified _ALVTGYFMQVAHLER_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.6411 3 578.97138 1733.89231 80452.73 0.6658 0.00038548 0.20868 0.00012082 0.87449 0.0005063 579.30576946443 582.307596030038 119.89 0.40531 119.89 119.69 120.09 0 63 19 6 0 0 0 0.023815 2 71026 21.814 21.814 1 1.1604 1.0101 0 1905300 702730 1202500 2291 1379 860 884 3576;3577 3576 ALVTGYFMQVAHLER 15 0 1 Unmodified _ALVTGYFMQVAHLER_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.3073 3 578.97138 1733.89231 80360.14 0.5526 0.00031994 0.054259 3.1414E-05 0.60686 0.00035135 579.305851705258 582.307446060926 119.57 0.35439 119.57 119.41 119.77 7.6294E-06 62 16 6 0 0 0 0.0014587 2 69962 38.376 38.376 1 1.2397 1.0545 0 2958300 1319200 1639100 2292 1379 860 884 3578;3579 3579 ALVVEMSR 8 0 1 Oxidation (M) _ALVVEM(ox)SR_ ALVVEM(1)SR ALVVEM(50.7)SR 0 1 0 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567;A0A0A6YYI9;A0A0S2Z5V2;F8WDX3;A0A0A0MSL8;B8ZZ74 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14;RBM14-RBM4 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.747 2 460.747127 919.479702 92195.03 0.15951 7.3493E-05 0.4049 0.00018656 0.56441 0.00026005 460.747051076247 465.751259883961 29.652 0.20245 29.652 29.575 29.778 0 43 15 4 0 0 0 0.015661 2 14414 50.703 32.855 1 1.5042 1.5036 0 16807000 7815300 8991300 2293 571 861 885 3580;3581 3581 422 ALVVEMSR 8 0 1 Oxidation (M) _ALVVEM(ox)SR_ ALVVEM(1)SR ALVVEM(49.44)SR 0 1 0 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567;A0A0A6YYI9;A0A0S2Z5V2;F8WDX3;A0A0A0MSL8;B8ZZ74 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14;RBM14-RBM4 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.747 2 460.747127 919.479702 95283.43 0.71802 0.00033082 0.20931 9.6437E-05 0.92732 0.00042726 460.74699688994 465.751380922229 29.16 0.18918 29.16 29.096 29.285 0 34 11 4 0 0 0 0.016655 1 14071 49.442 28.96 1 1.5225 1.571 0 21519000 7963500 13556000 2294 571 861 885 3582 3582 422 ALWEDEGVR 9 0 1 Unmodified _ALWEDEGVR_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;B0AZR9;Q14455;S4R3E3;Q5JWE9;H0Y7F4;S4R3V9 Q5FWY2 Q5FWY2 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.7676 2 537.764363 1073.51417 96102.83 1.0351 0.00055661 0.62088 0.00033389 1.6559 0.0008905 537.76504391357 542.768029776368 60.317 0.34126 60.317 60.12 60.461 3.8147E-06 63 29 4 0 0 0 0.0074668 1 34385 61.962 24.404 1 1.4786 1.5017 0 7557700 3015700 4542000 2295 549 862 886 3583 3583 ALWEDEGVR 9 0 1 Unmodified _ALWEDEGVR_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;B0AZR9;Q14455;S4R3E3;Q5JWE9;H0Y7F4;S4R3V9 Q5FWY2 Q5FWY2 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.7679 2 537.764363 1073.51417 92015.32 0.75158 0.00040417 0.084234 4.5298E-05 0.83581 0.00044947 537.764976410511 542.768206441832 59.074 0.28877 59.074 58.953 59.241 0 55 26 4 0 0 0 0.0091583 1 34370 60.436 24.041 1 1.5477 1.5607 0 10498000 3640400 6857800 2296 549 862 886 3584 3584 ALWFQGR 7 0 1 Unmodified _ALWFQGR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;Q9H4N1 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 439.2375 2 439.237587 876.460622 92633.61 0.13627 5.9857E-05 -0.14107 -6.1964E-05 -0.0047971 -2.1071E-06 439.237498423518 444.241639389511 71.705 0.25459 71.705 71.535 71.789 0 71 18 6 0 0 0 0.026859 2 43050 80.999 62.373 1 0.94526 1.0775 0 100520000 51359000 49160000 2297 542 863 887 3585;3586 3586 ALYDTFSAFGNILSCK 16 1 0 Unmodified _ALYDTFSAFGNILSCK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;B3KT93;A0A024R9E2;E5RGH3;E5RJB9;B1ANR0;Q6IQ30;Q13310;H0Y5F5;B1ANR1;H0YEQ8 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.9443 2 903.940187 1805.86582 NaN NaN NaN -0.51964 -0.00046972 NaN NaN NaN NaN 126.23 0.43472 126.23 126.05 126.48 -7.6294E-06 0 0 0 3.149E-06 1 84234 83.182 69.219 1 NaN NaN 0 11943000 11943000 0 2298 273;818 864 888 3587 3587 ALYLIATNGTPELQNPEK 18 1 0 Unmodified _ALYLIATNGTPELQNPEK_ 0 0 0 A8K5M4;Q9Y6B5;Q13177;H0YCG5;B7Z302;E9PM17;B7Z3K0;B3KNX7;A0A024R5P0;A8KAN3;Q13153 A8K5M4 A8K5M4 PAK2;PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 990.5308 2 986.52293 1971.03131 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.93 1 101.93 101.43 102.43 0 0 0 0 0.049983 1 62706 36.284 22.378 1 2299 750 865 889 3588 3588 ALYLIATNGTPELQNPEK 18 1 0 Unmodified _ALYLIATNGTPELQNPEK_ 0 0 0 A8K5M4;Q9Y6B5;Q13177;H0YCG5;B7Z302;E9PM17;B7Z3K0;B3KNX7;A0A024R5P0;A8KAN3;Q13153 A8K5M4 A8K5M4 PAK2;PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 991.0311 2 986.52293 1971.03131 NaN NaN NaN -0.27683 -0.0002731 NaN NaN NaN NaN 101.42 0.41551 101.42 101.25 101.67 -7.6294E-06 0 0 0 0.00062353 1 63784 56.951 45.419 1 NaN NaN 0 6405900 0 6405900 2300 750 865 889 3589 3589 ALYLIATNGTPELQNPEK 18 1 0 Unmodified _ALYLIATNGTPELQNPEK_ 0 0 0 A8K5M4;Q9Y6B5;Q13177;H0YCG5;B7Z302;E9PM17;B7Z3K0;B3KNX7;A0A024R5P0;A8KAN3;Q13153 A8K5M4 A8K5M4 PAK2;PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 986.524 2 986.52293 1971.03131 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.37 1 101.37 100.87 101.87 7.6294E-06 0 0 0 0.0052963 1 63816 49.423 34.392 1 2301 750 865 889 3590 3590 ALYLIATNGTPELQNPEK 18 1 0 Unmodified _ALYLIATNGTPELQNPEK_ 0 0 0 A8K5M4;Q9Y6B5;Q13177;H0YCG5;B7Z302;E9PM17;B7Z3K0;B3KNX7;A0A024R5P0;A8KAN3;Q13153 A8K5M4 A8K5M4 PAK2;PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 991.0317 2 986.52293 1971.03131 NaN NaN NaN -0.47646 -0.00047004 NaN NaN NaN NaN 114.09 0.24291 114.09 113.98 114.22 0 0 0 0 0.006309 1 65685 43.382 30.182 1 NaN NaN 0 941410 0 941410 2302 750 865 889 3591 3591 ALYYLQIHPQELR 13 0 1 Unmodified _ALYYLQIHPQELR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.9716 3 548.634985 1642.88313 82494.06 0.78926 0.00043302 0.012548 6.8844E-06 0.80181 0.0004399 548.634920586579 551.971160665815 91.701 1.1574 91.701 91.281 92.438 -7.6294E-06 645 101 9 0 0 0 3.4492E-05 4 55829 72.496 72.496 1 0.70051 0.80085 0 126490000 70070000 56422000 2303 1770 866 890 3592;3593;3594;3595 3594 ALYYLQIHPQELR 13 0 1 Unmodified _ALYYLQIHPQELR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.451 2 822.44884 1642.88313 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.515 1 91.515 91.015 92.015 0 0 0 0 0.0016579 1 55407 70.942 48.255 1 2304 1770 866 890 3596 3596 ALYYLQIHPQELR 13 0 1 Unmodified _ALYYLQIHPQELR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.9564 2 822.44884 1642.88313 66173.16 0.87537 0.00071995 0.22059 0.00018142 1.096 0.00090137 822.950198476572 827.453924216152 91.701 0.71413 91.701 91.394 92.108 0 158 59 5 0 0 0 0.0012283 1 55424 76.228 76.228 1 0.52174 0.53186 0 27030000 13520000 13510000 2305 1770 866 890 3597 3597 ALYYLQIHPQELR 13 0 1 Unmodified _ALYYLQIHPQELR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.6351 3 548.634985 1642.88313 80965.74 0.98884 0.00054251 -0.18438 -0.00010116 0.80446 0.00044135 548.63492399621 551.97099863989 90.367 1.0332 90.367 89.914 90.947 0 547 87 10 0 0 0 1.2362E-05 2 55771 97.551 97.551 1 0.68997 0.79605 0 237550000 133390000 104160000 2306 1770 866 890 3598;3599 3599 ALYYLQIHPQELR 13 0 1 Unmodified _ALYYLQIHPQELR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.4546 2 822.44884 1642.88313 67915.91 1.2216 0.0010047 0.97254 0.00079986 2.1941 0.0018046 822.450771904164 827.45358044704 90.317 0.80619 90.317 89.89 90.696 0 291 70 6 0 0 0 6.2579E-06 2 55774 104.79 104.79 1 0.62826 0.70312 0 44893000 26028000 18865000 2307 1770 866 890 3600;3601 3601 ALYYLQIHPQELR 13 0 1 Unmodified _ALYYLQIHPQELR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.9713 3 548.634985 1642.88313 80316.95 0.51108 0.0002804 -0.035512 -1.9483E-05 0.47557 0.00026091 548.634957249008 551.971080920128 104.37 0.87486 104.37 104.01 104.89 0 435 55 11 0 0 0 9.9955E-05 2 59317 59.306 59.306 1 1.1916 1.0254 0 52518000 24086000 28432000 2308 1770 866 890 3602;3603 3603 ALYYLQIHPQELR 13 0 1 Unmodified _ALYYLQIHPQELR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.4527 2 822.44884 1642.88313 66260.66 0.7921 0.00065146 0.33787 0.00027788 1.13 0.00092934 822.449589548073 827.452720644302 104.36 0.64763 104.36 104.04 104.69 0 240 41 8 0 0 0 0.00011321 3 59345 75.229 75.229 1 1.1687 0.96224 0 18104000 9427400 8676300 2309 1770 866 890 3604;3605;3606 3605 ALYYLQIHPQELR 13 0 1 Unmodified _ALYYLQIHPQELR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.4537 2 822.44884 1642.88313 67019.41 0.56701 0.00046634 0.50066 0.00041177 1.0677 0.00087811 822.449888015233 827.452902030541 103.97 0.63155 103.97 103.72 104.36 -7.6294E-06 269 41 9 0 0 0 0.00021605 3 58377 69.721 69.721 1 1.1137 0.9418 0 18160000 7901200 10259000 2310 1770 866 890 3607;3608;3609 3609 ALYYLQIHPQELR 13 0 1 Unmodified _ALYYLQIHPQELR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.9718 3 548.634985 1642.88313 80677.49 0.36908 0.00020249 0.1737 9.5296E-05 0.54278 0.00029779 548.635052030884 551.971150240283 103.99 1.0838 103.99 103.64 104.73 0 420 67 10 0 0 0 9.9955E-05 2 58241 61.212 61.212 1 1.2041 1.0503 0 40129000 18007000 22122000 2311 1770 866 890 3610;3611 3610 AMDLAQAGSTVESK 14 1 0 Oxidation (M) _AM(ox)DLAQAGSTVESK_ AM(1)DLAQAGSTVESK AM(130.16)DLAQAGSTVESK 0 1 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.348 2 712.340306 1422.66606 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.108 1 33.108 32.608 33.608 0 0 0 0 2.305E-17 1 16528 130.16 106.04 1 2312 907 867 891 3612 3612 727 AMDPQDLQNTEVPIATTAK 19 1 0 Oxidation (M) _AM(ox)DPQDLQNTEVPIATTAK_ AM(1)DPQDLQNTEVPIATTAK AM(41.62)DPQDLQNTEVPIATTAK 0 1 0 B3KNG8;Q9H2M9 B3KNG8 B3KNG8 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1034.0117 2 1030.00424 2057.99393 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.22 1 76.22 75.72 76.72 0 0 0 0 0.0091218 1 44908 41.621 33.71 1 2313 913 868 892 3613 3613 751 AMEVDERPTEQYSDIGGLDK 20 1 1 Oxidation (M) _AM(ox)EVDERPTEQYSDIGGLDK_ AM(1)EVDERPTEQYSDIGGLDK AM(65.78)EVDERPTEQYSDIGGLDK 0 1 1 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PMD8;E9PN50 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.3569 3 757.014479 2268.02161 69823.42 0.38411 0.00029077 -0.082042 -6.2107E-05 0.30207 0.00022867 757.348235510921 763.356589116914 61.998 0.62644 61.998 61.653 62.279 0 220 50 7 0 0 0 6.5454E-07 1 35450 65.784 65.784 1 2.8834 3.2335 0 21415000 4764900 16650000 2314 617 869 893 3614 3614 466 AMEVDERPTEQYSDIGGLDK 20 1 1 Oxidation (M) _AM(ox)EVDERPTEQYSDIGGLDK_ AM(1)EVDERPTEQYSDIGGLDK AM(66.32)EVDERPTEQYSDIGGLDK 0 1 1 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PMD8;E9PN50 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.3558 3 757.014479 2268.02161 NaN NaN NaN -0.24119 -0.00018258 NaN NaN NaN NaN 60.881 0.55894 60.881 60.59 61.149 0 0 0 0 5.2378E-06 2 35730 66.325 57.616 1 NaN NaN 0 19894000 0 19894000 2315 617 869 893 3615;3616 3616 466 AMEVDIEERPK 11 1 1 Oxidation (M) _AM(ox)EVDIEERPK_ AM(1)EVDIEERPK AM(87.36)EVDIEERPK 0 1 1 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8;B4E098 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.8945 3 444.886982 1331.63912 86157.95 0.0033956 1.5107E-06 -0.10165 -4.5223E-05 -0.098255 -4.3712E-05 444.886840481243 450.894514944568 26.98 0.28224 26.98 26.818 27.1 1.9073E-06 101 16 8 0 0 0 8.15E-05 1 12245 87.363 87.363 1 1.1421 1.3596 0 47516000 23585000 23931000 2316 2135 870 894 3617 3617 1967 AMEVDIEERPK 11 1 1 Oxidation (M) _AM(ox)EVDIEERPK_ AM(1)EVDIEERPK AM(46.46)EVDIEERPK 0 1 1 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8;B4E098 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.324 2 666.826834 1331.63912 72743.68 0.75202 0.00050147 0.087452 5.8315E-05 0.83947 0.00055978 666.827845834315 675.83788775663 27.205 0.21286 27.205 27.083 27.295 0 36 9 6 0 0 0 0.017257 1 12506 46.462 26.675 1 1.0871 1.1719 0 14373000 6264700 8108500 2317 2135 870 894 3618 3618 1967 AMEVDIEERPK 11 1 1 Oxidation (M) _AM(ox)EVDIEERPK_ AM(1)EVDIEERPK AM(89.4)EVDIEERPK 0 1 1 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8;B4E098 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.8945 3 444.886982 1331.63912 87029.11 0.14657 6.5207E-05 0.36711 0.00016332 0.51368 0.00022853 444.886931959923 450.89497089208 26.515 0.49689 26.515 26.131 26.627 0 112 26 9 0 0 0 6.9853E-05 1 11876 89.403 83.37 1 1.1308 1.3316 0 88009000 43617000 44392000 2318 2135 870 894 3619 3619 1967 AMEVDIEERPK 11 1 1 Unmodified _AMEVDIEERPK_ 0 0 1 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8;B4E098 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.8417 2 658.829377 1315.6442 75679.61 0.29525 0.00019452 -0.35099 -0.00023124 -0.055735 -3.672E-05 659.329984076924 667.840821445383 49.082 0.30418 49.082 48.938 49.242 -3.8147E-06 83 24 5 0 0 0 0.0037191 1 23386 73.233 52.332 1 0.86163 0.74214 0 1911600 1170300 741270 2319 2135 870 895 3620 3620 AMFLQPDLDSLVDFSTNNQK 20 1 0 Oxidation (M) _AM(ox)FLQPDLDSLVDFSTNNQK_ AM(1)FLQPDLDSLVDFSTNNQK AM(59.31)FLQPDLDSLVDFSTNNQK 0 1 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1154.557 2 1150.04918 2298.08381 55453.67 0.2458 0.00028268 -0.61924 -0.00071216 -0.37344 -0.00042947 1150.54996959549 1154.55694738203 123.85 0.83618 123.85 123.47 124.31 0 231 58 8 0 0 0 2.0443E-06 1 80321 59.306 54.676 1 1.0964 1.1805 0 33438000 14495000 18943000 2320 1997 871 896 3621 3621 1831 AMFLQPDLDSLVDFSTNNQK 20 1 0 Oxidation (M) _AM(ox)FLQPDLDSLVDFSTNNQK_ AM(1)FLQPDLDSLVDFSTNNQK AM(97.69)FLQPDLDSLVDFSTNNQK 0 1 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1150.0468 2 1150.04918 2298.08381 55486.04 0.20524 0.00023604 -0.5011 -0.00057629 -0.29586 -0.00034025 1150.55012905407 1154.55698531354 123.53 1.0764 123.53 123.26 124.34 0 266 75 9 0 0 0 8.8985E-10 2 82025 97.69 90.098 1 1.117 1.1693 0 34514000 14105000 20409000 2321 1997 871 896 3622;3623 3623 1831 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(155.48)GIM(155.48)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.4138 2 888.408197 1774.80184 63494.27 0.97993 0.00087058 0.77678 0.0006901 1.7567 0.0015607 888.410258041878 893.413148369375 110.83 2.7515 110.83 110.35 113.1 0 855 197 9 0 0 0 2.0628E-30 3 69924 155.48 138.95 1 1.9616 2.35 0 10010000000 4639400000 5370100000 2322 34;1513 872 897 3624;3625;3626 3625 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(71.56)GIM(71.56)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.9145 2 888.408197 1774.80184 63494.18 0.71523 0.00063542 -0.76994 -0.00068402 -0.054705 -4.86E-05 888.407960112162 893.412247791855 115.33 1.5169 115.33 114.64 116.16 -7.6294E-06 241 97 5 0 0 0 0.00026874 1 73304 71.555 62.361 1 1.2063 1.2612 0 13098000 4058800 9038900 2323 34;1513 872 897 3627 3627 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(119.45)GIM(119.45)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.4089 2 888.408197 1774.80184 64450.44 0.75184 0.00066794 -0.57297 -0.00050903 0.17888 0.00015891 888.407948642358 893.412061184669 117.39 1.483 117.39 116.87 118.36 0 509 97 9 0 0 0 2.6877E-10 2 75018 119.45 109.12 1 0.84493 0.88603 0 39330000 22604000 16726000 2324 34;1513 872 897 3628;3629 3629 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(47.29)GIM(47.29)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.4124 2 888.408197 1774.80184 67641.58 0.67721 0.00060164 -0.30565 -0.00027154 0.37157 0.0003301 888.4080509168 893.913512466297 128.65 0.38412 128.65 128.41 128.79 0 54 23 5 0 0 0 0.0019148 2 83839 47.288 41.185 1 1.0593 1.1019 0 5383000 2210500 3172500 2325 34;1513 872 897 3630;3631 3631 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(75.7)GIM(75.7)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.4086 2 888.408197 1774.80184 NaN NaN NaN -1.1967 -0.0010632 NaN NaN NaN NaN 104.04 0.23695 104.04 103.89 104.12 7.6294E-06 0 0 0 5.5988E-05 1 64203 75.695 66.507 1 NaN NaN 0 4995900 4995900 0 2326 34;1513 872 897 3632 3632 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(90.65)GIM(90.65)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.4122 2 888.408197 1774.80184 NaN NaN NaN -0.92585 -0.00082254 NaN NaN NaN NaN 115.76 0.25866 115.76 115.67 115.93 0 0 0 0 2.3846E-06 1 73807 90.653 81.331 1 NaN NaN 0 4310500 0 4310500 2327 34;1513 872 897 3633 3633 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(71.56)GIM(71.56)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.4084 2 888.408197 1774.80184 NaN NaN NaN 0.29148 0.00025895 NaN NaN NaN NaN 116.56 0.23505 116.56 116.4 116.64 7.6294E-06 0 0 0 9.4757E-05 1 74376 71.555 60.945 1 NaN NaN 0 3525800 3525800 0 2328 34;1513 872 897 3634 3634 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(115.33)GIM(115.33)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.4119 2 888.408197 1774.80184 64905.89 0.55214 0.00049052 -0.35206 -0.00031278 0.20008 0.00017775 888.407997313811 893.412150974056 116.96 1.1622 116.96 116.47 117.63 0 388 70 9 0 0 0 4.5763E-10 2 76412 115.33 107.6 1 0.75405 0.83542 0 42458000 24791000 17667000 2329 34;1513 872 897 3635;3636 3636 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(77.59)GIM(77.59)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.4092 2 888.408197 1774.80184 68612.87 0.79278 0.00070432 0.28751 0.00025542 1.0803 0.00095974 888.40852258589 893.913308571439 128.18 0.48331 128.18 127.85 128.34 0 47 28 4 0 0 0 0.00021586 2 85640 77.593 71.621 1 0.80235 0.82836 0 4773300 2748100 2025100 2330 34;1513 872 897 3637;3638 3637 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(107.85)GIM(107.85)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.4122 2 888.408197 1774.80184 NaN NaN NaN -0.20235 -0.00017977 NaN NaN NaN NaN 106.66 0.89194 106.66 106.31 107.2 0 0 0 0 5.1413E-11 1 67843 107.85 95.633 1 NaN NaN 0 11630000 0 11630000 2331 34;1513 872 897 3639 3639 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(62.34)GIM(62.34)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.9141 2 888.408197 1774.80184 NaN NaN NaN -0.92879 -0.00082514 NaN NaN NaN NaN 114.44 0.72051 114.44 114.36 115.08 0 0 0 0 0.00051083 1 74687 62.338 48.676 1 NaN NaN 0 6221800 0 6221800 2332 34;1513 872 897 3640 3640 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(50.21)GIM(50.21)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.4083 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.64 1 108.64 108.14 109.14 0 0 0 0 0.0063319 1 69585 50.207 44.236 1 2333 34;1513 872 897 3641 3641 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(54.02)GIM(54.02)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.4102 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.23 1 114.23 113.73 114.73 7.6294E-06 0 0 0 0.0034724 1 74271 54.023 47.364 1 2334 34;1513 872 897 3642 3642 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(50.35)GIM(50.35)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.4094 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.64 1 115.64 115.14 116.14 7.6294E-06 0 0 0 0.0062223 1 75502 50.354 41.165 1 2335 34;1513 872 897 3643 3643 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(44.62)GIM(44.62)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.4567 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.05 1 116.05 115.55 116.55 0 0 0 0 0.011097 1 75851 44.616 37.956 1 2336 34;1513 872 897 3644 3644 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(105.46)GIM(105.46)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.9074 2 888.408197 1774.80184 64517.18 0.32359 0.00028748 0.52262 0.0004643 0.84621 0.00075178 888.407999664922 893.41267870321 103.72 0.99217 103.72 103.13 104.12 0 245 84 4 0 0 0 1.4295E-10 1 65295 105.46 105.46 1 1.9185 1.9715 0 21214000 7104400 14109000 2337 34;1513 872 897 3645 3645 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(75.48)GIM(75.48)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.9099 2 888.408197 1774.80184 61520.89 0.59368 0.00052743 -0.86778 -0.00077094 -0.2741 -0.00024351 888.407831590391 893.412013976261 129.63 2.1078 129.63 128.76 130.87 0 606 100 13 0 0 0 0.0002578 2 78017 75.479 70.301 1 0.62752 0.54289 0 123690000 77702000 45991000 2338 34;1513 872 897 3646;3647 3646 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(95.4)GIM(95.4)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.91 2 888.408197 1774.80184 60901.11 0.8692 0.00077221 -1.2139 -0.0010784 -0.34469 -0.00030623 888.908798267729 893.412349916228 134.02 1.6127 134.02 132.82 134.43 0 291 72 9 0 0 0 8.125E-06 1 81380 95.401 89.368 1 0.55267 0.46377 0 10030000 6737400 3292100 2339 34;1513 872 897 3648 3648 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(56.09)GIM(56.09)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.9092 2 888.408197 1774.80184 NaN NaN NaN 0.001566 1.3912E-06 NaN NaN NaN NaN 120.34 0.97151 120.34 119.9 120.87 0 0 0 0 0.000947 1 71202 56.087 48.824 1 NaN NaN 0 2922300 2922300 0 2340 34;1513 872 897 3649 3649 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(107.09)GIM(107.09)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.4103 2 888.408197 1774.80184 NaN NaN NaN -1.0482 -0.00093125 NaN NaN NaN NaN 122.26 2.5135 122.26 121.67 124.19 0 0 0 0 5.5139E-11 2 73202 107.09 93.661 1 NaN NaN 0 2544700000 2544700000 0 2341 34;1513 872 897 3650;3651 3651 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(113.22)GIM(113.22)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 893.4129 2 888.408197 1774.80184 NaN NaN NaN -0.82127 -0.00072962 NaN NaN NaN NaN 129.36 0.99884 129.36 128.47 129.46 0 0 0 0 2.4992E-11 1 78145 113.22 97.685 1 NaN NaN 0 41943000 0 41943000 2342 34;1513 872 897 3652 3652 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(46.88)GIM(46.88)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.9007 2 888.408197 1774.80184 NaN NaN NaN -1.2834 -0.0011402 NaN NaN NaN NaN 131.69 0.65579 131.69 131.3 131.95 0 0 0 0 0.0027949 1 80018 46.88 40.908 1 NaN NaN 0 2309400 2309400 0 2343 34;1513 872 897 3653 3653 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(228.12)GIM(228.12)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 893.4129 2 888.408197 1774.80184 NaN NaN NaN -0.88247 -0.00078399 NaN NaN NaN NaN 134.54 0.49442 134.54 134.3 134.8 -1.5259E-05 0 0 0 2.5748E-115 1 82188 228.12 209.85 1 NaN NaN 0 129010000 0 129010000 2344 34;1513 872 897 3654 3654 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(72.09)GIM(72.09)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 893.4127 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.6 1 123.6 123.1 124.1 -7.6294E-06 0 0 0 0.0011398 1 73926 72.089 62.402 1 2345 34;1513 872 897 3655 3655 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(47.71)GIM(47.71)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.4088 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.43 1 127.43 126.93 127.93 0 0 0 0 0.0082019 1 76809 47.712 41.609 1 2346 34;1513 872 897 3656 3656 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(49.45)GIM(49.45)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.4096 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.59 1 130.59 130.09 131.09 0 0 0 0 0.006901 1 79158 49.448 43.345 1 2347 34;1513 872 897 3657 3657 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(165.7)GIM(165.7)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 888.4086 2 888.408197 1774.80184 61147.39 0.5889 0.00052319 -0.83869 -0.0007451 -0.24979 -0.00022191 888.909253135118 893.411988999707 129.39 2.5028 129.39 127.99 130.49 0 738 104 13 0 0 0 2.6709E-38 4 77142 165.7 149.16 1 0.63954 0.55862 0 211860000 127670000 84193000 2348 34;1513 872 897 3658;3659;3660;3661 3659 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(83.14)GIM(83.14)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 888.4096 2 888.408197 1774.80184 NaN NaN NaN -0.8027 -0.00071312 NaN NaN NaN NaN 122.09 2.6808 122.09 121.37 124.05 0 0 0 0 9.2235E-06 3 72133 83.137 73.949 1 NaN NaN 0 3497800000 3497800000 0 2349 34;1513 872 897 3662;3663;3664 3663 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(53.45)GIM(53.45)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 888.4092 2 888.408197 1774.80184 NaN NaN NaN -1.6073 -0.0014279 NaN NaN NaN NaN 133.96 1.0055 133.96 133.31 134.32 0 0 0 0 0.0013815 1 80879 53.448 44.259 1 NaN NaN 0 9559000 9559000 0 2350 34;1513 872 897 3665 3665 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(77.59)GIM(77.59)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 893.4131 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.47 1 123.47 122.97 123.97 0 0 0 0 0.00065707 1 72919 77.593 68.405 1 2351 34;1513 872 897 3666 3666 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(42.81)GIM(42.81)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 893.4124 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.24 1 124.24 123.74 124.74 0 0 0 0 0.021003 1 73513 42.809 36.838 1 2352 34;1513 872 897 3667 3667 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(57.17)GIM(57.17)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 888.4082 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.89 1 125.89 125.39 126.39 -7.6294E-06 0 0 0 0.0011105 1 74746 57.175 48.22 1 2353 34;1513 872 897 3668 3668 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(41.68)GIM(41.68)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 888.4086 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.68 1 126.68 126.18 127.18 -7.6294E-06 0 0 0 0.027176 1 75345 41.684 35.58 1 2354 34;1513 872 897 3669 3669 18;19 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(84.17)GIM(84.17)NSFVNDIFER 0 2 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 888.4095 2 888.408197 1774.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.47 1 127.47 126.97 127.97 0 0 0 0 0.00018959 1 75937 84.169 75.214 1 2355 34;1513 872 897 3670 3670 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AMGIM(ox)NSFVNDIFER_ AM(0.001)GIM(0.999)NSFVNDIFER AM(-30.62)GIM(30.62)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.4205 2 880.41074 1758.80693 63787.63 0.74717 0.00065782 -0.36051 -0.0003174 0.38666 0.00034042 880.410887907363 885.414763999113 117.42 1.083 117.42 116.97 118.06 7.6294E-06 610 73 12 0 0 0 8.4466E-11 2 74911 120.77 120.77 2 0.73737 0.87252 0 327800000 189900000 137910000 2356 34;1513 872 898 3671;3672 3671 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AM(ox)GIMNSFVNDIFER_ AM(1)GIMNSFVNDIFER AM(67.56)GIM(-67.56)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 880.9131 2 880.41074 1758.80693 63599.52 0.67362 0.00059306 -0.50614 -0.00044561 0.16748 0.00014746 880.411085240995 885.414768906238 122.9 1.4674 122.9 122.53 124 0 886 108 13 0 0 0 2.4905E-48 5 79612 186.46 168.8 2 0.69642 0.82734 0 983760000 576460000 407300000 2357 34;1513 872 898 3673;3674;3675;3676;3677 3675 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AM(ox)GIMNSFVNDIFER_ AM(0.94)GIM(0.06)NSFVNDIFER AM(11.94)GIM(-11.94)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.4375 2 880.41074 1758.80693 66773.44 0.58683 0.00051665 -2.0439 -0.0017995 -1.4571 -0.0012828 880.410530666577 885.414437294276 128.56 0.53798 128.56 128.21 128.75 0 130 36 8 0 0 0 0.0075819 1 83789 54.023 54.023 2 0.56115 0.58433 0 10493000 6943300 3549400 2358 34;1513 872 898 3678 3678 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AMGIM(ox)NSFVNDIFER_ AMGIM(1)NSFVNDIFER AM(-71.6)GIM(71.6)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.4151 2 880.41074 1758.80693 64205.86 0.56759 0.00049971 -0.24255 -0.00021354 0.32504 0.00028617 880.410967957357 885.414862644379 116.91 1.0465 116.91 116.47 117.51 0 531 63 13 0 0 0 8.4716E-48 1 76384 181.68 181.68 2 0.68532 0.79507 0 322950000 193690000 129260000 2359 34;1513 872 898 3679 3679 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AM(ox)GIMNSFVNDIFER_ AM(1)GIMNSFVNDIFER AM(65.63)GIM(-65.63)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.4113 2 880.41074 1758.80693 63666.96 0.6775 0.00059648 -0.50344 -0.00044324 0.17406 0.00015324 880.411098391689 885.41479577723 122.39 1.3521 122.39 122.02 123.38 7.6294E-06 931 104 13 0 0 0 3.9666E-22 4 81499 140.24 123.71 2 0.69244 0.81716 0 1282500000 756170000 526350000 2360 34;1513 872 898 3680;3681;3682;3683 3682 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AM(ox)GIMNSFVNDIFER_ AM(0.998)GIM(0.002)NSFVNDIFER AM(27.13)GIM(-27.13)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.4117 2 880.41074 1758.80693 64963.57 0.79112 0.00069651 -0.91306 -0.00080387 -0.12194 -0.00010736 880.911821409659 885.41488867722 128.18 0.36411 128.18 128.01 128.37 0 134 22 10 0 0 0 4.4405E-06 2 85646 93.623 83.297 2 0.5698 0.57358 0 19394000 11737000 7656900 2361 34;1513 872 898 3684;3685 3685 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AMGIM(ox)NSFVNDIFER_ AM(0.005)GIM(0.995)NSFVNDIFER AM(-22.61)GIM(22.61)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 880.4114 2 880.41074 1758.80693 62750.47 0.64081 0.00056417 -0.19206 -0.00016909 0.44875 0.00039508 880.411701624204 885.415134526135 129.6 2.0781 129.6 128.95 131.03 0 529 97 13 0 0 0 0.00010891 2 78634 71.176 71.176 2 0.61138 0.5323 0 344550000 211820000 132730000 2362 34;1513 872 898 3686;3687 3686 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AM(ox)GIMNSFVNDIFER_ AM(1)GIMNSFVNDIFER AM(118.55)GIM(-118.55)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 880.4119 2 880.41074 1758.80693 62059.23 0.74008 0.00065158 -0.55059 -0.00048475 0.18949 0.00016683 880.412238356604 885.414904899945 134.54 0.4476 134.54 134.41 134.86 0 115 12 14 0 0 0 1.6932E-224 2 82163 308.91 267.37 2 0.63684 0.56221 0 3215400000 1970700000 1244700000 2363 34;1513 872 898 3688;3689 3688 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AMGIM(ox)NSFVNDIFER_ AMGIM(1)NSFVNDIFER AM(-67.04)GIM(67.04)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 885.4155 2 880.41074 1758.80693 NaN NaN NaN -0.70253 -0.00061851 NaN NaN NaN NaN 129.34 0.45107 129.34 129.01 129.46 0 0 0 0 1.5211E-56 1 78161 178.67 155.06 2 NaN NaN 0 125070000 0 125070000 2364 34;1513 872 898 3690 3690 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AM(ox)GIMNSFVNDIFER_ AM(0.856)GIM(0.144)NSFVNDIFER AM(7.73)GIM(-7.73)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 880.4144 2 880.41074 1758.80693 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.1 1 129.1 128.6 129.6 0 0 0 0 0.0005878 1 78065 59.57 49.882 2 2365 34;1513 872 898 3691 3691 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AMGIM(ox)NSFVNDIFER_ AM(0.027)GIM(0.973)NSFVNDIFER AM(-15.52)GIM(15.52)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 885.4172 2 880.41074 1758.80693 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.54 1 131.54 131.04 132.04 0 0 0 0 0.0029161 1 79875 51.841 42.837 2 2366 34;1513 872 898 3692 3692 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AMGIM(ox)NSFVNDIFER_ AM(0.066)GIM(0.934)NSFVNDIFER AM(-11.49)GIM(11.49)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 885.4164 2 880.41074 1758.80693 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.39 1 134.39 133.89 134.89 0 0 0 0 0.00011918 1 82034 83.045 74.913 2 2367 34;1513 872 898 3693 3693 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AMGIM(ox)NSFVNDIFER_ AMGIM(1)NSFVNDIFER AM(-67.14)GIM(67.14)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 885.4155 2 880.41074 1758.80693 62899.68 0.60823 0.00053549 -0.19924 -0.00017542 0.40899 0.00036008 880.411527978474 885.415051238254 129.39 2.0055 129.39 128.72 130.72 0 625 81 13 0 0 0 8.3686E-31 5 77128 155.48 155.48 2 0.63495 0.55505 0 551600000 339020000 212580000 2368 34;1513 872 898 3694;3695;3696;3697;3698 3695 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AMGIM(ox)NSFVNDIFER_ AM(0.002)GIM(0.998)NSFVNDIFER AM(-27.25)GIM(27.25)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 880.4138 2 880.41074 1758.80693 62299.38 0.32135 0.00028292 -0.43719 -0.00038491 -0.11584 -0.00010198 880.412135136774 885.415001557945 134.46 1.0374 134.46 133.78 134.81 0 199 42 15 0 0 0 7.6757E-06 3 80968 88.596 85.468 2 0.63678 0.55759 0 4076900000 2496900000 1579900000 2369 34;1513 872 898 3699;3700;3701 3700 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AMGIM(ox)NSFVNDIFER_ AM(0.05)GIM(0.95)NSFVNDIFER AM(-12.78)GIM(12.78)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 880.4117 2 880.41074 1758.80693 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.38 1 131.38 130.88 131.88 0 0 0 0 0.014264 1 78838 42.083 33.354 2 2370 34;1513 872 898 3702 3702 18;19 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AMGIM(ox)NSFVNDIFER_ AM(0.134)GIM(0.866)NSFVNDIFER AM(-8.1)GIM(8.1)NSFVNDIFER 0 1 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 885.4169 2 880.41074 1758.80693 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.65 1 132.65 132.15 133.15 0 0 0 0 0.012056 1 79781 42.789 28.883 2 2371 34;1513 872 898 3703 3703 18;19 AMGIMNSFVNDIFER 15 0 1 Unmodified _AMGIMNSFVNDIFER_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.4135 2 872.413282 1742.81201 63051.27 0.6071 0.00052964 0.22279 0.00019436 0.82989 0.00072401 872.41374035914 877.417926177445 128.55 0.59943 128.55 128.2 128.79 0 277 39 11 0 0 0 1.6616E-38 3 83759 168.3 168.3 1 0.58198 0.68326 0 222320000 143750000 78571000 2372 34;1513 872 899 3704;3705;3706 3705 AMGIMNSFVNDIFER 15 0 1 Unmodified _AMGIMNSFVNDIFER_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.418 2 872.413282 1742.81201 64191.21 0.82432 0.00071915 -0.05142 -4.486E-05 0.7729 0.00067429 872.413551765701 877.417777090119 128.18 0.64761 128.18 127.85 128.5 0 289 40 12 0 0 0 1.6387E-05 2 85529 88.187 78.992 1 0.55458 0.64395 0 346140000 221600000 124540000 2373 34;1513 872 899 3707;3708 3707 AMGIMNSFVNDIFER 15 0 1 Unmodified _AMGIMNSFVNDIFER_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 877.4183 2 872.413282 1742.81201 63983.39 0.6554 0.00057178 -0.78071 -0.0006811 -0.12531 -0.00010932 872.413331538109 877.417186111475 134.78 0.44014 134.78 134.56 135 0 40 9 10 0 0 0 2.1867E-198 2 82507 294.4 294.4 1 1.149 1.0051 0 725380000 336640000 388740000 2374 34;1513 872 899 3709;3710 3709 AMGIMNSFVNDIFER 15 0 1 Unmodified _AMGIMNSFVNDIFER_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 878.1498 2 872.413282 1742.81201 69880.38 0.73143 0.00063811 -0.8689 -0.00075804 -0.13746 -0.00011992 872.914225260507 877.417089219502 142.85 0.10767 142.85 142.81 142.92 0 22 11 4 0 0 0 0.027668 1 84771 28.283 25.245 1 1.9378 1.7586 0 409940 207050 202890 2375 34;1513 872 899 3711 3711 AMGIMNSFVNDIFER 15 0 1 Unmodified _AMGIMNSFVNDIFER_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 877.4949 2 872.413282 1742.81201 64959.52 0.66132 0.00057694 -0.51142 -0.00044617 0.1499 0.00013077 872.413513694168 877.919034885668 135.16 0.67134 135.16 135 135.67 0 136 29 8 0 0 0 0.051003 1 82842 36.447 36.447 1 1.1923 0.99958 0 4089500 1794400 2295000 2376 34;1513 872 899 3712 3712 AMGIMNSFVNDIFER 15 0 1 Unmodified _AMGIMNSFVNDIFER_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 877.9107 2 872.413282 1742.81201 63702.6 0.63959 0.00055799 -0.31084 -0.00027118 0.32876 0.00028681 872.413732222514 877.417563879009 134.74 0.30467 134.74 134.59 134.9 0 33 6 11 0 0 0 3.9703E-199 4 81522 300.71 287.31 1 1.0992 0.96131 0 906980000 431680000 475300000 2377 34;1513 872 899 3713;3714;3715;3716 3713 AMGQGLPDEEQEK 13 1 0 Oxidation (M) _AM(ox)GQGLPDEEQEK_ AM(1)GQGLPDEEQEK AM(57.35)GQGLPDEEQEK 0 1 0 Q9Y4W2 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.327 2 724.322113 1446.62967 72358.02 0.45049 0.0003263 -0.025632 -1.8566E-05 0.42486 0.00030774 724.824975937315 728.328663829643 24.987 0.23871 24.987 24.849 25.088 0 37 13 4 0 0 0 0.00075399 1 10647 57.347 53.049 1 2.1628 2.1692 0 9864600 3036700 6827900 2378 2146 873 900 3717 3717 1984 AMGQGLPDEEQEK 13 1 0 Oxidation (M) _AM(ox)GQGLPDEEQEK_ AM(1)GQGLPDEEQEK AM(123.51)GQGLPDEEQEK 0 1 0 Q9Y4W2 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.3279 2 724.322113 1446.62967 72852.91 0.86755 0.00062839 0.59187 0.0004287 1.4594 0.0010571 724.322461992675 728.329029360991 24.796 0.35673 24.796 24.655 25.012 0 45 15 5 0 0 0 8.5335E-10 1 10446 123.51 116.84 1 2.8879 2.9625 0 9452100 2939600 6512500 2379 2146 873 900 3718 3718 1984 AMGVVVATGVNTEIGK 16 1 0 Oxidation (M) _AM(ox)GVVVATGVNTEIGK_ AM(1)GVVVATGVNTEIGK AM(99.52)GVVVATGVNTEIGK 0 1 0 A0A0S2Z3L2;P16615;H7C5W9 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.4235 2 781.416348 1560.81814 NaN NaN NaN -0.43025 -0.0003362 NaN NaN NaN NaN 70.853 0.49577 70.853 70.624 71.12 0 0 0 0 3.1996E-09 1 42351 99.522 76.605 1 NaN NaN 0 5364400 0 5364400 2380 554 874 901 3719 3719 408 AMLAQQYQEGTLSVEK 16 1 0 Oxidation (M) _AM(ox)LAQQYQEGTLSVEK_ AM(1)LAQQYQEGTLSVEK AM(76.52)LAQQYQEGTLSVEK 0 1 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 910.4547 2 906.445834 1810.87711 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.678 1 63.678 63.178 64.178 0 0 0 0 0.0002691 1 36566 76.522 60.633 1 2381 397;1622 875 902 3720 3720 286 AMLAQQYQEGTLSVEK 16 1 0 Oxidation (M) _AM(ox)LAQQYQEGTLSVEK_ AM(1)LAQQYQEGTLSVEK AM(85.29)LAQQYQEGTLSVEK 0 1 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 910.9584 2 906.445834 1810.87711 NaN NaN NaN 0.12303 0.00011152 NaN NaN NaN NaN 62.747 0.46248 62.747 62.513 62.975 0 0 0 0 7.729E-07 1 36734 85.288 68.263 1 NaN NaN 0 5025500 0 5025500 2382 397;1622 875 902 3721 3721 286 AMLSGPGQFAENETNEVNFR 20 0 1 Oxidation (M) _AM(ox)LSGPGQFAENETNEVNFR_ AM(1)LSGPGQFAENETNEVNFR AM(83.73)LSGPGQFAENETNEVNFR 0 1 0 E5RHG8;A0A024R7Y5;Q15369 E5RHG8 E5RHG8 TCEB1 Transcription elongation factor B polypeptide 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1119.5145 2 1114.00785 2226.00115 NaN NaN NaN -0.22644 -0.00025225 NaN NaN NaN NaN 88.43 0.17868 88.43 88.356 88.535 0 0 0 0 1.336E-10 1 53312 83.729 76.69 1 NaN NaN 0 3713900 0 3713900 2383 238 876 903 3722 3722 177 AMLSGPGQFAENETNEVNFR 20 0 1 Oxidation (M) _AM(ox)LSGPGQFAENETNEVNFR_ AM(1)LSGPGQFAENETNEVNFR AM(94.55)LSGPGQFAENETNEVNFR 0 1 0 E5RHG8;A0A024R7Y5;Q15369 E5RHG8 E5RHG8 TCEB1 Transcription elongation factor B polypeptide 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1119.5099 2 1114.00785 2226.00115 NaN NaN NaN 0.13778 0.00015349 NaN NaN NaN NaN 87.737 0.37905 87.737 87.492 87.871 0 0 0 0 5.8701E-14 1 53982 94.551 85.501 1 NaN NaN 0 6095100 0 6095100 2384 238 876 903 3723 3723 177 AMNQQTTLDTPQLER 15 0 1 Oxidation (M) _AM(ox)NQQTTLDTPQLER_ AM(1)NQQTTLDTPQLER AM(45.92)NQQTTLDTPQLER 0 1 0 E7EMW7;O95071 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.43 2 881.425433 1760.83631 NaN NaN NaN 0.18792 0.00016564 NaN NaN NaN NaN 55.64 0.091576 55.64 55.583 55.675 -3.8147E-06 0 0 0 0.0049388 1 31277 45.915 31.758 1 NaN NaN 0 4253300 0 4253300 2385 1218 877 904 3724 3724 928 AMNQQTTLDTPQLER 15 0 1 Oxidation (M) _AM(ox)NQQTTLDTPQLER_ AM(1)NQQTTLDTPQLER AM(55.45)NQQTTLDTPQLER 0 1 0 E7EMW7;O95071 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.4289 2 881.425433 1760.83631 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.626 1 54.626 54.126 55.126 -3.8147E-06 0 0 0 0.001371 1 31241 55.452 43.586 1 2386 1218 877 904 3725 3725 928 AMNVLTEAEER 11 0 1 Oxidation (M) _AM(ox)NVLTEAEER_ AM(1)NVLTEAEER AM(126.31)NVLTEAEER 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8097 2 639.803359 1277.59217 75491.28 0.93047 0.00059532 -0.2025 -0.00012956 0.72797 0.00046576 639.803262984285 644.807377714621 45.366 0.53698 45.366 44.955 45.492 3.8147E-06 272 47 8 0 0 0 3.5898E-10 2 24287 126.31 118.09 1 1.1155 1.2584 0 99886000 49668000 50218000 2387 69 878 905 3726;3727 3727 39 AMNVLTEAEER 11 0 1 Oxidation (M) _AM(ox)NVLTEAEER_ AM(1)NVLTEAEER AM(105.4)NVLTEAEER 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8077 2 639.803359 1277.59217 75491.29 0.37622 0.00024071 -0.057754 -3.6951E-05 0.31846 0.00020375 639.803311815067 644.8074788764 45.761 0.57242 45.761 45.565 46.138 -3.8147E-06 180 51 6 0 0 0 9.0973E-06 1 24731 105.4 96.533 1 0.89547 1.0208 0 118800000 54714000 64086000 2388 69 878 905 3728 3728 39 AMNVLTEAEER 11 0 1 Oxidation (M) _AM(ox)NVLTEAEER_ AM(1)NVLTEAEER AM(128.27)NVLTEAEER 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.8038 2 639.803359 1277.59217 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.785 1 45.785 45.285 46.285 0 0 0 0 1.4183E-13 1 24673 128.27 102.33 1 2389 69 878 905 3729 3729 39 AMNVLTEAEER 11 0 1 Oxidation (M) _AM(ox)NVLTEAEER_ AM(1)NVLTEAEER AM(126.31)NVLTEAEER 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.8094 2 639.803359 1277.59217 75255.34 0.85778 0.00054881 -0.23777 -0.00015213 0.62001 0.00039669 639.803252828911 644.807345643138 44.468 0.5394 44.468 44.05 44.589 0 241 48 6 0 0 0 3.5898E-10 3 24140 126.31 118.09 1 1.0645 1.2117 0 110990000 57910000 53075000 2390 69 878 905 3730;3731;3732 3732 39 AMNVLTEAEER 11 0 1 Oxidation (M) _AM(ox)NVLTEAEER_ AM(1)NVLTEAEER AM(128.27)NVLTEAEER 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8036 2 639.803359 1277.59217 74086.08 0.77158 0.00049366 -0.054292 -3.4736E-05 0.71729 0.00045892 639.803423690772 644.807507602151 44.849 1.0081 44.849 44.14 45.148 0 325 83 9 0 0 0 2.9883E-10 3 24599 128.27 113.6 1 0.99097 1.1323 0 151990000 70898000 81093000 2391 69 878 905 3733;3734;3735 3733 39 AMNVLTEAEER 11 0 1 Oxidation (M) _AM(ox)NVLTEAEER_ AM(1)NVLTEAEER AM(60.43)NVLTEAEER 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.8076 2 639.803359 1277.59217 74175.2 0.45643 0.00029203 0.0029772 1.9048E-06 0.45941 0.00029393 639.803361466989 644.807485789468 52.854 0.54354 52.854 52.503 53.046 0 288 41 9 0 0 0 0.001501 2 26045 60.434 56.135 1 1.2149 0.99518 0 12947000 5702400 7244400 2392 69 878 905 3736;3737 3737 39 AMNVLTEAEER 11 0 1 Oxidation (M) _AM(ox)NVLTEAEER_ AM(1)NVLTEAEER AM(86.18)NVLTEAEER 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.8074 2 639.803359 1277.59217 74822.02 0.52889 0.00033838 -0.5359 -0.00034287 -0.007017 -4.4895E-06 639.803129757073 644.807129873647 53.204 0.66397 53.204 52.974 53.638 0 321 49 9 0 0 0 0.00016474 2 26503 86.18 81.882 1 1.2543 1.0237 0 15552000 6450200 9102100 2393 69 878 905 3738;3739 3739 39 AMNVLTEAEER 11 0 1 Oxidation (M) _AM(ox)NVLTEAEER_ AM(1)NVLTEAEER AM(51.09)NVLTEAEER 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.8076 2 639.803359 1277.59217 NaN NaN NaN -0.52793 -0.00033777 NaN NaN NaN NaN 73.284 0.78862 73.284 72.963 73.752 0 0 0 0 0.0083839 1 38676 51.092 39.244 1 NaN NaN 0 2301300 0 2301300 2394 69 878 905 3740 3740 39 AMNVLTEAEER 11 0 1 Oxidation (M) _AM(ox)NVLTEAEER_ AM(1)NVLTEAEER AM(60.1)NVLTEAEER 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.8079 2 639.803359 1277.59217 74813.8 0.44609 0.00028541 0.13156 8.417E-05 0.57765 0.00036958 639.803447504712 644.807653823054 53.264 0.54868 53.264 52.949 53.498 0 227 37 8 0 0 0 0.00159 2 25704 60.102 58.37 1 1.1679 0.95171 0 12652000 5927100 6724500 2395 69 878 905 3741;3742 3741 39 AMNVLTEAEER 11 0 1 Oxidation (M) _AM(ox)NVLTEAEER_ AM(1)NVLTEAEER AM(83.88)NVLTEAEER 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.8069 2 639.803359 1277.59217 74738.94 0.45758 0.00029276 -0.10707 -6.8504E-05 0.35051 0.00022426 639.803453766525 644.807443821724 53.651 0.74893 53.651 53.374 54.123 0 321 52 9 0 0 0 0.00017893 2 26179 83.883 80.905 1 1.2154 0.98756 0 9960100 4541300 5418800 2396 69 878 905 3743;3744 3743 39 AMNVLTEAEER 11 0 1 Oxidation (M) _AM(ox)NVLTEAEER_ AM(1)NVLTEAEER AM(50.35)NVLTEAEER 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.803 2 639.803359 1277.59217 75544.39 0.56158 0.0003593 -0.55815 -0.00035711 0.0034286 2.1936E-06 639.803022230679 644.807084311702 73.788 0.80101 73.788 73.423 74.224 0 222 57 7 0 0 0 0.0042081 2 38313 50.353 50.353 1 1.863 1.6289 0 2561800 929510 1632300 2397 69 878 905 3745;3746 3746 39 AMNVLTEAEER 11 0 1 Unmodified _AMNVLTEAEER_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.8103 2 631.805902 1261.59725 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.473 1 63.473 62.973 63.973 0 0 0 0 0.027542 1 36448 50.108 31.328 1 2398 69 878 906 3747 3747 AMNVLTEAEER 11 0 1 Unmodified _AMNVLTEAEER_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.8097 2 631.805902 1261.59725 74935.51 0.54872 0.00034668 -0.26956 -0.00017031 0.27915 0.00017637 631.806031658693 636.8097324715 73.295 0.86411 73.295 72.963 73.827 0 302 62 6 0 0 0 0.0036568 1 38601 59.426 54.813 1 1.6829 1.4011 0 10713000 3713200 6999800 2399 69 878 906 3748 3748 AMNVLTEAEER 11 0 1 Unmodified _AMNVLTEAEER_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8107 2 631.805902 1261.59725 75949.86 0.56926 0.00035966 -0.41851 -0.00026442 0.15075 9.5244E-05 631.806034309346 636.809659956619 73.793 0.90994 73.793 73.382 74.291 0 296 66 6 0 0 0 0.00040176 1 38135 81.338 79.183 1 1.8345 1.4822 0 10749000 3568500 7180100 2400 69 878 906 3749 3749 AMPEEEPVRGPAK 13 1 1 Oxidation (M) _AM(ox)PEEEPVRGPAK_ AM(1)PEEEPVRGPAK AM(68.68)PEEEPVRGPAK 0 1 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.2381 3 476.238014 1425.69221 86557.66 -0.070294 -3.3477E-05 0.25071 0.0001194 0.18042 8.5922E-05 476.237972373171 482.245845619972 19.955 0.46683 19.955 19.828 20.295 0 41 13 7 0 0 0 5.958E-05 2 6444 68.676 62.24 1 0.98757 1.1807 0 54264000 26062000 28202000 2401 899;1099 879 907 3750;3751 3751 720 AMPEEEPVRGPAK 13 1 1 Oxidation (M) _AM(ox)PEEEPVRGPAK_ AM(1)PEEEPVRGPAK AM(150.1)PEEEPVRGPAK 0 1 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.8524 2 713.853383 1425.69221 71883.59 0.48895 0.00034904 0.1805 0.00012885 0.66946 0.00047789 713.85352319621 722.864897354752 19.955 0.29044 19.955 19.787 20.078 0 39 8 8 0 0 0 4.61E-20 2 6452 150.1 150.1 1 1.0584 1.2551 0 42226000 18856000 23371000 2402 899;1099 879 907 3752;3753 3752 720 AMPEEEPVRGPAK 13 1 1 Oxidation (M) _AM(ox)PEEEPVRGPAK_ AM(1)PEEEPVRGPAK AM(67.52)PEEEPVRGPAK 0 1 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2454 3 476.238014 1425.69221 84721.73 -0.23145 -0.00011022 -0.11371 -5.4151E-05 -0.34515 -0.00016437 476.238902780672 482.24543018158 19.834 0.44622 19.834 19.597 20.043 0 91 19 9 0 0 0 6.555E-05 1 6158 67.519 61.642 1 1.0605 1.2486 0 85956000 40401000 45555000 2403 899;1099 879 907 3754 3754 720 AMPEEEPVRGPAK 13 1 1 Oxidation (M) _AM(ox)PEEEPVRGPAK_ AM(1)PEEEPVRGPAK AM(90.91)PEEEPVRGPAK 0 1 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.8645 2 713.853383 1425.69221 71013.76 0.24426 0.00017437 -0.11947 -8.5285E-05 0.12479 8.9081E-05 713.8534368241 722.864801420351 19.853 0.26285 19.853 19.671 19.934 0 50 10 8 0 0 0 0.00010181 2 6191 90.913 83.634 1 0.96086 1.1291 0 63012000 32480000 30532000 2404 899;1099 879 907 3755;3756 3756 720 AMPEEEPVRGPAK 13 1 1 Oxidation (M) _AM(ox)PEEEPVRGPAK_ AM(1)PEEEPVRGPAK AM(42)PEEEPVRGPAK 0 1 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.8531 2 713.853383 1425.69221 71274.17 0.27648 0.00019736 -0.17717 -0.00012648 0.099302 7.0887E-05 713.853253559918 722.86503183895 21.346 0.30931 21.346 21.227 21.536 0 50 10 7 0 0 0 0.0086115 1 6463 42.001 37.217 1 0.79711 0.6637 0 3581800 2046800 1535100 2405 899;1099 879 907 3757 3757 720 AMQADISQAAQILSSDPSR 19 0 1 Oxidation (M) _AM(ox)QADISQAAQILSSDPSR_ AM(1)QADISQAAQILSSDPSR AM(64.39)QADISQAAQILSSDPSR 0 1 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1002.9885 2 1002.98639 2003.95822 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.597 1 91.597 91.097 92.097 -7.6294E-06 0 0 0 6.7381E-05 1 55476 64.394 42.762 1 2406 1562 880 908 3758 3758 1315 AMQADISQAAQILSSDPSR 19 0 1 Oxidation (M) _AM(ox)QADISQAAQILSSDPSR_ AM(1)QADISQAAQILSSDPSR AM(65.47)QADISQAAQILSSDPSR 0 1 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1007.9914 2 1002.98639 2003.95822 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.064 1 91.064 90.564 91.564 0 0 0 0 5.5935E-05 1 56360 65.472 50.44 1 2407 1562 880 908 3759 3759 1315 AMSSGGSGGGVPEQEDSVLFR 21 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)AM(ox)SSGGSGGGVPEQEDSVLFR_ AM(1)SSGGSGGGVPEQEDSVLFR AM(41.09)SSGGSGGGVPEQEDSVLFR 1 1 0 B4DP61;E7EQZ4;Q16637;Q9UNT8 B4DP61 B4DP61 SMN2;SMN1;SMN Survival motor neuron protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1068.4819 2 1062.97876 2123.94296 NaN NaN NaN -0.66208 -0.00070377 NaN NaN NaN NaN 98.925 0.072289 98.925 98.863 98.936 7.6294E-06 0 0 0 0.00050013 1 61955 41.092 32.362 1 NaN NaN 0 2616900 0 2616900 2408 1019 881 909 3760 3760 807 AMSTLVPQGGPVLCR 15 0 1 Oxidation (M) _AM(ox)STLVPQGGPVLCR_ AM(1)STLVPQGGPVLCR AM(86.9)STLVPQGGPVLCR 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.4109 2 801.410543 1600.80653 68142.66 0.99612 0.0007983 -0.12891 -0.00010331 0.86721 0.00069499 801.410079155429 806.414344641908 78.076 0.41264 78.076 77.861 78.274 7.6294E-06 119 32 6 0 0 0 1.27E-05 2 46168 86.898 86.898 1 1.1165 1.1525 0 13974000 5862100 8111400 2409 168 882 910 3761;3762 3762 141 AMSTLVPQGGPVLCR 15 0 1 Oxidation (M) _AM(ox)STLVPQGGPVLCR_ AM(1)STLVPQGGPVLCR AM(87.3)STLVPQGGPVLCR 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.4113 2 801.410543 1600.80653 67607.56 0.52912 0.00042404 0.12702 0.00010179 0.65614 0.00052584 801.410605741811 806.414912701562 77.113 0.41251 77.113 76.871 77.284 7.6294E-06 123 33 7 0 0 0 9.482E-06 2 46585 87.298 83.874 1 1.0298 1.016 0 14821000 7480000 7341100 2410 168 882 910 3763;3764 3764 141 AMTMLTIEQLSYLLK 15 1 0 2 Oxidation (M) _AM(ox)TM(ox)LTIEQLSYLLK_ AM(1)TM(1)LTIEQLSYLLK AM(49.45)TM(49.45)LTIEQLSYLLK 0 2 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q2HXV5;Q5TH12;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.9672 2 893.970099 1785.92564 65258.59 1.1145 0.00099629 -0.048569 -4.3419E-05 1.0659 0.00095287 894.471999049759 898.479168253889 125.33 0.36458 125.33 125.16 125.52 0 103 23 6 0 0 0 0.001007 1 81416 49.448 49.448 1 1.1041 1.1082 0 7508300 3660400 3847900 2411 422;1317 883 911 3765 3765 307;308 AMTMLTIEQLSYLLK 15 1 0 2 Oxidation (M) _AM(ox)TM(ox)LTIEQLSYLLK_ AM(1)TM(1)LTIEQLSYLLK AM(57.16)TM(57.16)LTIEQLSYLLK 0 2 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q2HXV5;Q5TH12;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.9772 2 893.970099 1785.92564 67029.92 1.1463 0.0010248 0.035956 3.2143E-05 1.1823 0.0010569 894.471881712767 897.976461985401 124.92 0.34914 124.92 124.78 125.13 7.6294E-06 112 25 6 0 0 0 0.00054118 2 83154 57.164 57.164 1 0.88114 0.88873 0 7793100 4334800 3458300 2412 422;1317 883 911 3766;3767 3767 307;308 AMVEYEIDLQK 11 1 0 Oxidation (M) _AM(ox)VEYEIDLQK_ AM(1)VEYEIDLQK AM(87.91)VEYEIDLQK 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.8396 2 677.831585 1353.64862 72211.2 0.37228 0.00025235 0.36897 0.0002501 0.74126 0.00050245 677.832205496401 681.838847253985 72.589 1.1489 72.589 71.86 73.009 0 439 85 7 0 0 0 0.00015161 2 42690 87.913 83.615 1 0.85945 0.97225 0 102790000 56050000 46742000 2413 139 884 912 3768;3769 3769 117 AMVEYEIDLQK 11 1 0 Oxidation (M) _AM(ox)VEYEIDLQK_ AM(1)VEYEIDLQK AM(93.6)VEYEIDLQK 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8322 2 677.831585 1353.64862 73927.12 0.32679 0.00022151 0.10775 7.304E-05 0.43455 0.00029455 677.832245262887 681.838538566831 71.506 1.1573 71.506 70.736 71.893 0 402 88 7 0 0 0 8.8011E-05 2 43012 93.598 80.244 1 0.76278 0.85236 0 93645000 55497000 38148000 2414 139 884 912 3770;3771 3771 117 AMVEYEIDLQK 11 1 0 Oxidation (M) _AM(ox)VEYEIDLQK_ AM(1)VEYEIDLQK AM(52.73)VEYEIDLQK 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 677.8325 2 677.831585 1353.64862 76789.59 0.49567 0.00033598 0.024804 1.6813E-05 0.52047 0.00035279 677.832117020308 681.838468028731 83.165 0.80387 83.165 82.671 83.475 0 247 47 7 0 0 0 0.0035711 2 45156 52.725 48.427 1 0.48456 0.38642 0 9546200 5988200 3558000 2415 139 884 912 3772;3773 3772 117 AMVEYEIDLQK 11 1 0 Oxidation (M) _AM(ox)VEYEIDLQK_ AM(1)VEYEIDLQK AM(70.91)VEYEIDLQK 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.8318 2 677.831585 1353.64862 74141.52 0.67249 0.00045584 -0.33985 -0.00023036 0.33264 0.00022548 677.831787180262 681.838203731153 83.369 0.84218 83.369 82.881 83.723 0 225 47 9 0 0 0 0.00048129 2 44498 70.908 66.61 1 0.65767 0.54094 0 10099000 6166200 3932300 2416 139 884 912 3774;3775 3774 117 AMYPGTFYFQFK 12 1 0 Oxidation (M) _AM(ox)YPGTFYFQFK_ AM(1)YPGTFYFQFK AM(77.68)YPGTFYFQFK 0 1 0 M4VP52;Q59GY0;Q9NRW3 M4VP52 M4VP52 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.8544 2 758.352488 1514.69042 70651.38 0.73108 0.00055441 0.42213 0.00032012 1.1532 0.00087453 758.854103604777 762.359745730928 107.63 0.5566 107.63 107.4 107.96 7.6294E-06 160 39 5 0 0 0 9.4326E-05 1 68697 77.677 74.377 1 0.82371 0.82511 0 15736000 7242700 8493500 2417 1357 885 913 3776 3776 1025 ANANQPLLTPK 11 1 0 Unmodified _ANANQPLLTPK_ 0 0 0 B5MBX1;A8K356;A8K9C0;A0A0C4DFT8;B4DFY8;G3XAA4;B3KPL2;Q9NQC1 B5MBX1 B5MBX1 JADE2;PHF15 Protein Jade-2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.8295 2 583.830037 1165.64552 NaN NaN NaN -2.9501 -0.0017223 NaN NaN NaN NaN 40.544 0.37408 40.544 40.409 40.783 0 0 0 0 0.0068776 1 21630 63.076 49.496 1 NaN NaN 0 7908400 7908400 0 2418 507 886 914 3777 3777 ANATVDGLEQGYVVCPSEK 19 1 0 Unmodified _ANATVDGLEQGYVVCPSEK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1023.4924 2 1018.98331 2035.95207 59789.31 0.42218 0.00043019 0.2173 0.00022143 0.63948 0.00065162 1018.9834220616 1023.49323632771 80.104 0.62201 80.104 79.772 80.394 -7.6294E-06 333 52 9 0 0 0 1.1957E-39 3 47487 191.06 191.06 1 0.97304 1.1029 0 92838000 53556000 39282000 2419 303 887 915 3778;3779;3780 3779 ANATVDGLEQGYVVCPSEK 19 1 0 Unmodified _ANATVDGLEQGYVVCPSEK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1019.4857 2 1018.98331 2035.95207 NaN NaN NaN -0.014547 -1.4823E-05 NaN NaN NaN NaN 79.176 0.63547 79.176 78.868 79.503 0 0 0 0 4.7265E-06 1 47925 68.83 63.337 1 NaN NaN 0 46275000 46275000 0 2420 303 887 915 3781 3781 ANATVDGLEQGYVVCPSEK 19 1 0 Unmodified _ANATVDGLEQGYVVCPSEK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1022.9918 2 1018.98331 2035.95207 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.126 1 79.126 78.626 79.626 -7.6294E-06 0 0 0 5.3726E-157 1 48043 244.56 185.19 1 2421 303 887 915 3782 3782 ANATVDGLEQGYVVCPSEK 19 1 0 Unmodified _ANATVDGLEQGYVVCPSEK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1019.4842 2 1018.98331 2035.95207 59553.02 0.15087 0.00015373 -0.060774 -6.1928E-05 0.090091 9.1801E-05 1019.48492772923 1022.99060392491 91.931 0.84434 91.931 91.558 92.403 -7.6294E-06 413 47 12 0 0 0 0.000548 1 50137 39.005 39.005 1 1.5746 1.3341 0 62364000 23758000 38606000 2422 303 887 915 3783 3783 ANCIDSTASAEAVFASEVK 19 1 0 Unmodified _ANCIDSTASAEAVFASEVK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.9625 2 985.462212 1968.90987 61058.33 0.42869 0.00042246 0.12232 0.00012054 0.55101 0.000543 985.963909950148 989.469544739338 98.135 0.93663 98.135 97.811 98.747 0 541 76 9 0 0 0 7.8318E-06 4 59779 76.358 76.358 1 0.73626 0.84106 0 180950000 98490000 82455000 2423 1506 888 916 3784;3785;3786;3787 3785 ANCIDSTASAEAVFASEVK 19 1 0 Unmodified _ANCIDSTASAEAVFASEVK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 989.4688 2 985.462212 1968.90987 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.755 1 98.755 98.255 99.255 0 0 0 0 0.036465 1 60396 37.555 31.452 1 2424 1506 888 916 3788 3788 ANCIDSTASAEAVFASEVK 19 1 0 Unmodified _ANCIDSTASAEAVFASEVK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 985.4648 2 985.462212 1968.90987 61336.16 0.31423 0.00030966 0.033407 3.2921E-05 0.34764 0.00034258 985.963908865156 989.46933142839 97.475 1.0028 97.475 97.145 98.147 0 515 80 10 0 0 0 1.071E-22 4 60774 132.44 132.44 1 0.7375 0.85111 0 189700000 108730000 80974000 2425 1506 888 916 3789;3790;3791;3792 3790 ANCIDSTASAEAVFASEVK 19 1 0 Unmodified _ANCIDSTASAEAVFASEVK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 985.9637 2 985.462212 1968.90987 60419.92 0.4852 0.00047815 -0.1467 -0.00014457 0.3385 0.00033358 985.963698041588 989.469300776505 111.46 1.2006 111.46 111.1 112.3 -7.6294E-06 381 65 12 0 0 0 2.2247E-12 2 64506 109.48 109.48 1 0.91224 0.79599 0 166960000 84179000 82778000 2426 1506 888 916 3793;3794 3794 ANCIDSTASAEAVFASEVK 19 1 0 Unmodified _ANCIDSTASAEAVFASEVK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 985.9631 2 985.462212 1968.90987 60429.73 0.24156 0.00023805 0.1031 0.0001016 0.34466 0.00033965 985.462529302153 989.469540822367 111.43 1.0563 111.43 111.13 112.19 0 407 56 13 0 0 0 2.5404E-08 2 63519 95.067 95.067 1 0.93778 0.80581 0 153220000 81095000 72123000 2427 1506 888 916 3795;3796 3796 ANCIDSTASAEAVFASEVKK 20 2 0 Unmodified _ANCIDSTASAEAVFASEVKK_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.3538 3 700.008888 2097.00483 71136.12 0.79402 0.00055582 0.48178 0.00033725 1.2758 0.00089308 700.344472559736 705.352156702204 97.323 0.73538 97.323 97.079 97.815 0 223 40 10 0 0 0 3.1405E-05 2 54689 42.348 33.748 1 0.87993 0.74898 0 27822000 13998000 13824000 2428 1506 889 917 3797;3798 3797 ANCIDSTASAEAVFASEVKK 20 2 0 Unmodified _ANCIDSTASAEAVFASEVKK_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.6874 3 700.008888 2097.00483 71838.13 0.37573 0.00026302 0.19202 0.00013441 0.56775 0.00039743 700.344242974555 705.352031009429 97.216 0.6861 97.216 96.977 97.663 0 221 34 12 0 0 0 1.554E-06 3 53807 54.225 54.225 1 0.84798 0.72032 0 27167000 14006000 13161000 2429 1506 889 917 3799;3800;3801 3799 ANDYANAVLQALSNVPPLR 19 0 1 Unmodified _ANDYANAVLQALSNVPPLR_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1018.5447 2 1013.53945 2025.06434 60531.78 0.12981 0.00013157 0.15236 0.00015443 0.28218 0.000286 1014.04202335822 1018.54389886771 133.42 0.36717 133.42 133.26 133.63 0 19 8 5 0 0 0 0.011102 1 89676 24.964 24.964 1 0.89321 0.97618 0 36515000 15544000 20971000 2430 1119 890 918 3802 3802 ANEAMAIDTLLISDELFR 18 0 1 Oxidation (M) _ANEAM(ox)AIDTLLISDELFR_ ANEAM(1)AIDTLLISDELFR ANEAM(42.21)AIDTLLISDELFR 0 1 0 B3KPC1;A0A024QZR3;Q9BRX2 B3KPC1 B3KPC1 hCG_2002731;PELO Protein pelota homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1019.5124 2 1019.5117 2037.00886 NaN NaN NaN -0.79672 -0.00081227 NaN NaN NaN NaN 132.38 0.272 132.38 132.25 132.52 0 0 0 0 0.0024112 1 86461 42.209 20.958 1 NaN NaN 0 1785500 1785500 0 2431 26 891 919 3803 3803 15 ANEEGLALLQEEIDK 15 1 0 Unmodified _ANEEGLALLQEEIDK_ 0 0 0 A0A024RD28;Q7L2Z9 A0A024RD28 A0A024RD28 C6orf139;CENPQ Centromere protein Q MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.4265 2 836.425424 1670.8363 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.07 1 108.07 107.57 108.57 0 0 0 0 0.0014828 1 69091 65.295 49.404 1 2432 376 892 920 3804 3804 ANEEGLALLQEEIDK 15 1 0 Unmodified _ANEEGLALLQEEIDK_ 0 0 0 A0A024RD28;Q7L2Z9 A0A024RD28 A0A024RD28 C6orf139;CENPQ Centromere protein Q MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.9351 2 836.425424 1670.8363 65576.57 0.49536 0.00041433 0.3407 0.00028497 0.83606 0.0006993 836.927750522003 840.933899262748 120.17 0.39828 120.17 119.92 120.32 0 63 16 5 0 0 0 0.00014503 1 71283 79.744 79.744 1 1.1499 0.9212 0 7347500 3251500 4096000 2433 376 892 920 3805 3805 ANEEGLALLQEEIDK 15 1 0 Unmodified _ANEEGLALLQEEIDK_ 0 0 0 A0A024RD28;Q7L2Z9 A0A024RD28 A0A024RD28 C6orf139;CENPQ Centromere protein Q MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 840.4328 2 836.425424 1670.8363 65708.12 0.80292 0.00067158 0.12094 0.00010115 0.92386 0.00077274 836.424841457146 840.433427148331 119.88 0.54099 119.88 119.64 120.18 0 87 22 6 0 0 0 0.00077161 1 70228 50.354 50.354 1 1.2543 1.0228 0 7753600 3469600 4284000 2434 376 892 920 3806 3806 ANEHQGIGFLNDPR 14 0 1 Unmodified _ANEHQGIGFLNDPR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;B3KY55 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.929 3 523.258577 1566.7539 83090.91 0.29014 0.00015182 -0.094704 -4.9555E-05 0.19544 0.00010227 523.258712863134 526.594583964567 54.811 0.33434 54.811 54.623 54.958 3.8147E-06 105 28 5 0 0 0 4.851E-05 1 31341 61.641 53.86 1 1.8954 1.915 0 19810000 7849800 11961000 2435 231 893 921 3807 3807 ANELLQR 7 0 1 Unmodified _ANELLQR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.2433 2 422.237784 842.461016 93651.48 0.13707 5.7875E-05 0.45249 0.00019106 0.58956 0.00024893 422.237934446175 427.2419830132 29.117 0.47106 29.117 28.776 29.247 -1.9073E-06 69 25 4 0 0 0 0.02687 1 14028 81.297 10.384 1 1.1215 1.1504 0 36133000 16093000 20039000 2436 39 894 922 3808 3808 ANELLQR 7 0 1 Unmodified _ANELLQR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.242 2 422.237784 842.461016 93650.67 0.15109 6.3794E-05 0.75321 0.00031804 0.9043 0.00038183 422.237924392051 427.242255275223 28.409 0.38947 28.409 28.172 28.562 0 77 25 4 0 0 0 0.022881 1 13587 91.626 9.8424 1 0.96067 1.0524 0 31166000 15037000 16129000 2437 39 894 922 3809 3809 ANELPQPPVPEPANAGK 17 1 0 Unmodified _ANELPQPPVPEPANAGK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347 X5D2J9 X5D2J9 GTF2I General transcription factor II-I ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.9499 2 864.949401 1727.88425 NaN NaN NaN -0.62283 -0.00053872 NaN NaN NaN NaN 77.722 0.66668 77.722 77.424 78.09 0 0 0 0 0.016237 1 45795 53.252 53.252 1 NaN NaN 0 7438900 7438900 0 2438 789 895 923 3810 3810 ANELPQPPVPEPANAGK 17 1 0 Unmodified _ANELPQPPVPEPANAGK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347 X5D2J9 X5D2J9 GTF2I General transcription factor II-I ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.452 2 864.949401 1727.88425 NaN NaN NaN -0.034329 -2.9693E-05 NaN NaN NaN NaN 76.829 0.67062 76.829 76.462 77.133 0 0 0 0 0.010131 1 46263 48.659 40.146 1 NaN NaN 0 8690500 8690500 0 2439 789 895 923 3811 3811 ANENSNIQVLSER 13 0 1 Unmodified _ANENSNIQVLSER_ 0 0 0 B4DTW7;Q6UN15 B4DTW7 B4DTW7 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.3724 2 737.368244 1472.72193 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.771 1 50.771 50.271 51.271 0 0 0 0 0.02248 1 28043 45.915 30.943 1 2440 1035 896 924 3812 3812 ANENSNIQVLSER 13 0 1 Unmodified _ANENSNIQVLSER_ 0 0 0 B4DTW7;Q6UN15 B4DTW7 B4DTW7 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.3681 2 737.368244 1472.72193 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.934 1 50.934 50.434 51.434 3.8147E-06 0 0 0 0.0038872 1 28152 62.408 46.183 1 2441 1035 896 924 3813 3813 ANENSNIQVLSER 13 0 1 Unmodified _ANENSNIQVLSER_ 0 0 0 B4DTW7;Q6UN15 B4DTW7 B4DTW7 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.373 2 737.368244 1472.72193 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.831 1 49.831 49.331 50.331 0 0 0 0 2.0686E-06 1 28088 100.55 74.49 1 2442 1035 896 924 3814 3814 ANENSNIQVLSER 13 0 1 Unmodified _ANENSNIQVLSER_ 0 0 0 B4DTW7;Q6UN15 B4DTW7 B4DTW7 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.3668 2 737.368244 1472.72193 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.874 1 49.874 49.374 50.374 0 0 0 0 0.0050437 1 28116 58.313 31.198 1 2443 1035 896 924 3815 3815 ANEQEPCGWWLAR 13 0 1 Unmodified _ANEQEPCGWWLAR_ 0 0 0 P51116;I3L1Z2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.3719 2 808.867357 1615.72016 69025.88 0.86686 0.00070117 0.068725 5.5589E-05 0.93558 0.00075676 808.867335886776 814.372742395249 91.497 0.22028 91.497 91.382 91.602 0 53 16 6 0 0 0 0.00031691 2 55422 64.82 58.58 1 1.1323 1.1899 0 11575000 5145700 6429400 2444 1593 897 925 3816;3817 3817 ANEQEPCGWWLAR 13 0 1 Unmodified _ANEQEPCGWWLAR_ 0 0 0 P51116;I3L1Z2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.8712 2 808.867357 1615.72016 NaN NaN NaN -1.0204 -0.00082533 NaN NaN NaN NaN 90.592 0.24066 90.592 90.428 90.669 0 0 0 0 0.001969 1 56020 72.434 61.91 1 NaN NaN 0 5422800 0 5422800 2445 1593 897 925 3818 3818 ANGPNYIQPQK 11 1 0 Unmodified _ANGPNYIQPQK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.3243 2 615.317294 1228.62004 NaN NaN NaN -0.03868 -2.3801E-05 NaN NaN NaN NaN 28.392 0.1175 28.392 28.31 28.428 0 0 0 0 0.013324 1 13573 55.112 42.886 1 NaN NaN 0 2881500 0 2881500 2446 104 898 926 3819 3819 ANGTTVHVGIHPSK 14 1 0 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.3823 2 709.380957 1416.74736 71736.37 0.59628 0.00042299 0.43963 0.00031187 1.0359 0.00073486 709.882884695338 713.388301327695 23.778 0.26971 23.778 23.666 23.936 0 63 13 8 0 0 0 2.5732E-21 3 9613 167.73 142.29 1 0.86531 0.94109 0 48007000 26343000 21664000 2447 1629;1214 899 927 3820;3821;3822 3822 ANGTTVHVGIHPSK 14 1 0 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2567 3 473.256397 1416.74736 87179.64 0.15767 7.4618E-05 -0.25831 -0.00012225 -0.10064 -4.763E-05 473.256303824128 475.927711337945 23.779 0.39197 23.779 23.622 24.014 0 118 17 10 0 0 0 2.4522E-05 2 9642 88.561 88.561 1 0.76257 0.86247 0 147570000 80199000 67367000 2448 1629;1214 899 927 3823;3824 3824 ANGTTVHVGIHPSK 14 1 0 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.3821 2 709.380957 1416.74736 73858.38 0.1062 7.5337E-05 0.9705 0.00068845 1.0767 0.00076379 709.381650373947 713.388456748062 22.855 0.2645 22.855 22.701 22.965 0 65 11 8 0 0 0 3.4046E-06 1 8725 110.98 110.98 1 0.88388 0.90232 0 31360000 16993000 14367000 2449 1629;1214 899 927 3825 3825 ANGTTVHVGIHPSK 14 1 0 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2565 3 473.256397 1416.74736 86803.85 -0.29654 -0.00014034 0.57886 0.00027395 0.28232 0.00013361 473.256722480461 475.928043928143 22.853 0.52186 22.853 22.611 23.133 0 138 22 10 0 0 0 0.0018922 2 8743 52.265 52.265 1 0.80121 0.90239 0 122880000 69097000 53787000 2450 1629;1214 899 927 3826;3827 3826 ANGTTVHVGIHPSK 14 1 0 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.9276 3 473.256397 1416.74736 85990.98 0.067879 3.2124E-05 -0.029001 -1.3725E-05 0.038878 1.8399E-05 473.256499212651 475.927654964485 25.587 0.43132 25.587 25.396 25.827 0 106 17 10 0 0 0 0.00043064 2 9378 44.294 44.294 1 0.55152 0.44715 0 25353000 16971000 8381400 2451 1629;1214 899 927 3828;3829 3829 ANGTTVHVGIHPSK 14 1 0 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.3815 2 709.380957 1416.74736 72710.66 0.5227 0.00037079 -0.064924 -4.6056E-05 0.45778 0.00032474 709.380970352636 713.388157267648 25.567 0.28646 25.567 25.431 25.718 0 53 10 7 0 0 0 0.018893 2 9382 39.746 31.017 1 0.55557 0.43387 0 3801300 2439800 1361500 2452 1629;1214 899 927 3830;3831 3830 ANGTTVHVGIHPSK 14 1 0 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.9279 3 473.256397 1416.74736 87033.62 0.35832 0.00016958 -0.287 -0.00013582 0.071318 3.3752E-05 473.256600344137 475.927509592567 25.316 0.97374 25.316 24.632 25.606 0 177 50 10 0 0 0 0.00054613 2 8648 39.033 39.033 1 0.55128 0.44232 0 18542000 12071000 6470800 2453 1629;1214 899 927 3832;3833 3832 ANGTTVHVGIHPSK 14 1 0 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.3817 2 709.380957 1416.74736 72362.43 0.63126 0.0004478 0.083548 5.9267E-05 0.71481 0.00050707 709.381194784872 713.387928386471 25.323 0.32153 25.323 25.165 25.486 0 82 17 7 0 0 0 0.00017664 2 8686 56.139 47.41 1 0.59504 0.47116 0 3172700 1912600 1260200 2454 1629;1214 899 927 3834;3835 3834 ANGVTDLLVVHEHR 14 0 1 Unmodified _ANGVTDLLVVHEHR_ 0 0 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.951 3 520.614473 1558.82159 86459.01 0.021958 1.1431E-05 0.79755 0.00041522 0.81951 0.00042665 520.949622243609 523.950917952405 71.398 0.55349 71.398 70.977 71.53 0 84 36 5 0 0 0 0.055481 1 37578 16.427 9.2255 1 1.6605 1.4424 0 2262500 990040 1272400 2455 1286 900 928 3836 3836 ANILGLAAGQR 11 0 1 Unmodified _ANILGLAAGQR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.3211 2 542.317097 1082.61964 83703.73 0.69693 0.00037796 -0.48474 -0.00026288 0.2122 0.00011508 542.316715684143 547.32092378598 76.56 0.71879 76.56 76.307 77.026 0 256 60 6 0 0 0 0.0018027 1 45136 64.711 39.817 1 0.82904 0.87804 0 41369000 22022000 19347000 2456 1745 901 929 3837 3837 ANILGLAAGQR 11 0 1 Unmodified _ANILGLAAGQR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.3168 2 542.317097 1082.61964 83476.52 0.47305 0.00025654 -0.10006 -5.4266E-05 0.37298 0.00020227 542.316891067496 547.321034851885 75.453 0.66666 75.453 75.039 75.705 0 267 58 6 0 0 0 0.0015533 3 45387 66.621 56.356 1 0.81341 0.94063 0 56501000 31025000 25477000 2457 1745 901 929 3838;3839;3840 3839 ANILGLAAGQR 11 0 1 Unmodified _ANILGLAAGQR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.3216 2 542.317097 1082.61964 81150.01 0.50271 0.00027263 0.10096 5.4751E-05 0.60367 0.00032738 542.31701023564 547.321231434677 87.274 0.76894 87.274 86.881 87.65 0 209 43 7 0 0 0 0.025046 2 47822 41.427 38.018 1 1.4429 1.2237 0 9285200 4081200 5204000 2458 1745 901 929 3841;3842 3841 ANILGLAAGQR 11 0 1 Unmodified _ANILGLAAGQR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.3179 2 542.317097 1082.61964 81381.59 0.52525 0.00028485 0.18727 0.00010156 0.71252 0.00038641 542.317139736825 547.321242092085 87.27 0.82964 87.27 86.85 87.68 0 203 48 6 0 0 0 0.0054128 2 47057 56.258 52.85 1 1.445 1.1702 0 10422000 3989600 6432000 2459 1745 901 929 3843;3844 3844 ANINVENAFFTLAR 14 0 1 Unmodified _ANINVENAFFTLAR_ 0 0 0 A0A024R7I3;P61006 A0A024R7I3 A0A024R7I3 RAB8A Ras-related protein Rab-8A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.9218 2 790.414997 1578.81544 68122.1 0.66347 0.00052442 -0.13599 -0.00010749 0.52748 0.00041693 790.415354185027 795.419192216396 130.88 0.41512 130.88 130.64 131.05 0 64 16 6 0 0 0 0.0025962 2 79344 48.568 48.568 1 1.8246 1.6025 0 1803500 680150 1123400 2460 226 902 930 3845;3846 3845 ANINVENAFFTLAR 14 0 1 Unmodified _ANINVENAFFTLAR_ 0 0 0 A0A024R7I3;P61006 A0A024R7I3 A0A024R7I3 RAB8A Ras-related protein Rab-8A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 795.4196 2 790.414997 1578.81544 71577.01 1.0507 0.00083047 0.26056 0.00020595 1.3112 0.0010364 790.414359377887 796.423624248183 130.68 0.37279 130.68 130.44 130.81 0 63 14 6 0 0 0 0.0010858 2 78272 56.205 56.205 1 1.5828 1.3895 0 2512400 778010 1734300 2461 226 902 930 3847;3848 3847 ANITLSGK 8 1 0 Unmodified _ANITLSGK_ 0 0 0 E9PLD3;A0A0B4J220;L0R588;E9PRG8 E9PLD3 E9PLD3 C11orf98;C11orf48 Uncharacterized protein C11orf98 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 402.2344 2 402.23471 802.454868 NaN NaN NaN -0.037438 -1.5059E-05 NaN NaN NaN NaN 28.802 0.52863 28.802 28.558 29.086 0 0 0 0 0.0079474 1 13675 81.191 25.069 1 NaN NaN 0 34990000 34990000 0 2462 501 903 931 3849 3849 ANITLSGK 8 1 0 Unmodified _ANITLSGK_ 0 0 0 E9PLD3;A0A0B4J220;L0R588;E9PRG8 E9PLD3 E9PLD3 C11orf98;C11orf48 Uncharacterized protein C11orf98 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 402.2348 2 402.23471 802.454868 97862.02 0.16554 6.6585E-05 -0.0031819 -1.2799E-06 0.16236 6.5306E-05 402.234557529781 406.241613970739 28.157 0.3508 28.157 28.01 28.361 0 47 16 7 0 0 0 0.027474 1 13430 53.878 20.236 1 0.85759 0.95831 0 53112000 25821000 27291000 2463 501 903 931 3850 3850 ANLEESFPR 9 0 1 Acetyl (Protein N-term) _(ac)ANLEESFPR_ 1 0 0 Q14690;B4DH82;B4DES7;S4R3Q4 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1105.5388 1 1104.53201 1103.52474 57661.51 0.36103 0.00039877 0.71073 0.00078502 1.0718 0.0011838 1104.53221518052 1114.54156131833 93.345 0.79164 93.345 92.904 93.695 0 192 66 4 0 0 0 0.0069818 1 56544 44.349 35.486 1 0.82985 0.86283 0 20960000 10276000 10685000 2464 1741 904 932 3851 3851 ANLGVFSVFAPR 12 0 1 Unmodified _ANLGVFSVFAPR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.3583 2 639.35368 1276.69281 75722.05 1.0115 0.0006467 -0.41414 -0.00026478 0.59735 0.00038192 639.353254486498 644.357489662964 118.23 0.60733 118.23 117.94 118.55 0 131 36 4 0 0 0 1.5589E-08 2 75835 121.83 108.85 1 1.0071 1.0381 0 24439000 11148000 13292000 2465 684 905 933 3852;3853 3853 ANLGVFSVFAPR 12 0 1 Unmodified _ANLGVFSVFAPR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.3585 2 639.35368 1276.69281 75509.27 0.97093 0.00062077 0.096968 6.1997E-05 1.0679 0.00068277 639.353405933059 644.357605846221 117.68 0.71337 117.68 117.31 118.02 0 184 46 5 0 0 0 3.4072E-08 2 77142 117.7 106.34 1 1.0434 1.1354 0 28880000 14239000 14640000 2466 684 905 933 3854;3855 3855 ANLGVFSVFAPR 12 0 1 Unmodified _ANLGVFSVFAPR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.3549 2 639.35368 1276.69281 NaN NaN NaN 0.71238 0.00045546 NaN NaN NaN NaN 130.31 0.48354 130.31 130.06 130.55 0 0 0 0 0.0065299 1 78860 60.167 46.049 1 NaN NaN 0 2307800 2307800 0 2467 684 905 933 3856 3856 ANLGVFSVFAPR 12 0 1 Unmodified _ANLGVFSVFAPR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.3542 2 639.35368 1276.69281 NaN NaN NaN 0.27711 0.00017717 NaN NaN NaN NaN 130.06 0.53334 130.06 129.83 130.36 0 0 0 0 0.0080792 1 77782 57.347 32.572 1 NaN NaN 0 2863800 2863800 0 2468 684 905 933 3857 3857 ANLNQHLTVHSVK 13 1 0 Unmodified _ANLNQHLTVHSVK_ 0 0 0 B3KSR1;G5E9Z1;Q17R98 B3KSR1 B3KSR1 ZNF827 Zinc finger protein 827 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.9092 2 730.902057 1459.78956 NaN NaN NaN 0.35502 0.00025948 NaN NaN NaN NaN 81.083 0.49075 81.083 80.828 81.319 0 0 0 0 0.0033906 1 49396 65.347 45.56 1 NaN NaN 0 16433000 0 16433000 2469 940 906 934 3858 3858 ANLPQSFQVDTSK 13 1 0 Unmodified _ANLPQSFQVDTSK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.8723 2 717.864805 1433.71506 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.701 1 67.701 67.201 68.201 0 0 0 0 1.2538E-06 1 39162 103.44 71.946 1 2470 1504 907 935 3859 3859 ANLPQSFQVDTSK 13 1 0 Unmodified _ANLPQSFQVDTSK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.8723 2 717.864805 1433.71506 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.615 1 66.615 66.115 67.115 0 0 0 0 1.606E-16 1 39379 127.87 92.326 1 2471 1504 907 935 3860 3860 ANLQELDQFLGPYPYATLK 19 1 0 Unmodified _ANLQELDQFLGPYPYATLK_ 0 0 0 A2A2Q9;Q9Y312 A2A2Q9 A2A2Q9 AAR2 Protein AAR2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1095.5776 2 1091.06496 2180.11537 58873.98 0.42038 0.00045866 -0.48736 -0.00053174 -0.066975 -7.3074E-05 1091.06486916015 1095.57241797466 126.07 0.44125 126.07 125.87 126.31 -7.6294E-06 128 33 6 0 0 0 0.00063286 1 82016 49.929 49.929 1 1.358 1.378 0 6558100 2923600 3634600 2472 647 908 936 3861 3861 ANLQIDQINTDLNLER 16 0 1 Unmodified _ANLQIDQINTDLNLER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 940.489 2 935.486879 1868.9592 62532.6 0.6787 0.00063492 -0.10108 -9.4557E-05 0.57762 0.00054036 935.486796010612 940.490912178446 104.36 0.82874 104.36 104.02 104.84 0 427 68 10 0 0 0 1.9193E-06 2 64306 94.023 94.023 1 1.6707 1.9759 0 284690000 104180000 180510000 2473 81 909 937 3862;3863 3862 ANLQIDQINTDLNLER 16 0 1 Unmodified _ANLQIDQINTDLNLER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 940.9929 2 935.486879 1868.9592 62198.6 0.40656 0.00038033 0.056613 5.2961E-05 0.46317 0.00043329 935.486995654213 940.491056549668 103.77 0.77823 103.77 103.38 104.15 -7.6294E-06 466 66 11 0 0 0 1.407E-13 2 65491 125.03 105.17 1 1.6478 1.898 0 220050000 85084000 134960000 2474 81 909 937 3864;3865 3864 ANLQIDQINTDLNLER 16 0 1 Unmodified _ANLQIDQINTDLNLER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 940.4922 2 935.486879 1868.9592 62116.77 0.80716 0.00075509 0.072017 6.7371E-05 0.87918 0.00082246 935.486873859771 940.491137177905 116.08 0.62743 116.08 115.78 116.4 7.6294E-06 139 26 10 0 0 0 0.00015349 2 68057 68.171 68.171 1 3.1372 2.6982 0 48177000 13363000 34814000 2475 81 909 937 3866;3867 3866 ANLQIDQINTDLNLER 16 0 1 Unmodified _ANLQIDQINTDLNLER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 940.9934 2 935.486879 1868.9592 61950.13 0.85045 0.00079558 0.075071 7.0228E-05 0.92552 0.00086581 935.487020025639 940.491090548884 115.96 0.49111 115.96 115.74 116.24 -7.6294E-06 152 24 9 0 0 0 1.407E-13 2 67031 125.03 107.22 1 2.5194 2.1992 0 96029000 26752000 69277000 2476 81 909 937 3868;3869 3868 ANLQQAIVTPLK 12 1 0 Unmodified _ANLQQAIVTPLK_ 0 0 0 Q643R0;Q9ULW0 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.3616 2 648.387719 1294.76089 77249.82 0.45821 0.0002971 -0.44967 -0.00029156 0.0085465 5.5414E-06 648.3861824049 652.394594989436 96.842 0.5851 96.842 96.603 97.188 0 164 27 8 0 0 0 6.7775E-06 1 53552 107.45 97.674 1 1.357 1.1177 0 10600000 4474700 6125200 2477 1837 910 938 3870 3870 ANLQQAIVTPLKPVDNTYYK 20 2 0 Unmodified _ANLQQAIVTPLKPVDNTYYK_ 0 0 1 Q643R0;Q9ULW0 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.4147 3 759.414354 2275.22123 70901.97 0.7178 0.0005451 -0.005412 -4.1099E-06 0.71238 0.00054099 759.748555268476 765.091647979307 94.256 0.58508 94.256 93.892 94.477 0 166 53 5 0 0 0 0.016422 1 57298 29.384 29.384 1 0.89606 1.063 0 26786000 16886000 9900200 2478 1837 911 939 3871 3871 ANLQQAIVTPLKPVDNTYYK 20 2 0 Unmodified _ANLQQAIVTPLKPVDNTYYK_ 0 0 1 Q643R0;Q9ULW0 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.0918 3 759.414354 2275.22123 70127.94 0.72836 0.00055313 -0.25434 -0.00019315 0.47401 0.00035997 759.748321407908 765.091187878067 107.31 0.47226 107.31 107.09 107.56 0 218 28 11 0 0 0 9.6241E-18 2 61513 98.269 94.741 1 1.2621 1.0727 0 37245000 15692000 21553000 2479 1837 911 939 3872;3873 3873 ANLQQAIVTPLKPVDNTYYK 20 2 0 Unmodified _ANLQQAIVTPLKPVDNTYYK_ 0 0 1 Q643R0;Q9ULW0 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.749 3 759.414354 2275.22123 69753.77 0.70802 0.00053768 -0.21397 -0.0001625 0.49404 0.00037518 759.748292493887 764.756996494113 107.1 0.5257 107.1 106.83 107.36 7.6294E-06 259 32 11 0 0 0 4.3378E-18 2 60384 93.269 93.269 1 1.3425 1.1402 0 26278000 10812000 15467000 2480 1837 911 939 3874;3875 3875 ANLSLLR 7 0 1 Unmodified _ANLSLLR_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.7458 2 393.745245 785.475937 96283.08 0.036145 1.4232E-05 0.016569 6.5241E-06 0.052714 2.0756E-05 393.745150091681 398.749366475412 61.316 0.72528 61.316 60.983 61.708 0 164 54 4 0 0 0 0.032098 1 35057 66.087 14.631 1 1.6872 1.6911 0 16219000 7446400 8772800 2481 1510 912 940 3876 3876 ANLSLLR 7 0 1 Unmodified _ANLSLLR_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 398.7491 2 393.745245 785.475937 95357.12 0.20751 8.1707E-05 -0.45601 -0.00017955 -0.24849 -9.7843E-05 393.744846712822 398.74908084108 60.037 0.55998 60.037 59.754 60.314 0 158 39 5 0 0 0 0.026774 2 34992 78.616 18.257 1 2.0036 2.0971 0 22685000 9263100 13421000 2482 1510 912 940 3877;3878 3877 ANNPGIVLTFVLPTEQFHLGK 21 1 0 Unmodified _ANNPGIVLTFVLPTEQFHLGK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.4294 3 765.754711 2294.2423 74946.52 0.1972 0.000151 -0.2311 -0.00017696 -0.0339 -2.5959E-05 766.088830964846 768.759841961502 129.26 0.75824 129.26 129.02 129.77 0 161 55 7 0 0 0 3.5263E-16 1 84144 108.17 108.17 1 0.84241 0.88456 0 30413000 7942300 22471000 2483 2081 913 941 3879 3879 ANNPGIVLTFVLPTEQFHLGK 21 1 0 Unmodified _ANNPGIVLTFVLPTEQFHLGK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.0886 3 765.754711 2294.2423 NaN NaN NaN 0.43189 0.00033072 NaN NaN NaN NaN 129.16 0.17833 129.16 129.04 129.22 0 0 0 0 3.3381E-14 1 84197 92.563 85.203 1 NaN NaN 0 10312000 10312000 0 2484 2081 913 941 3880 3880 ANNPGIVLTFVLPTEQFHLGK 21 1 0 Unmodified _ANNPGIVLTFVLPTEQFHLGK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.0881 3 765.754711 2294.2423 71586.94 0.60425 0.00046271 -1.0453 -0.00080042 -0.44102 -0.00033771 766.087276766472 768.759846650469 128.44 0.59267 128.44 128.02 128.61 0 169 42 8 0 0 0 1.0747E-11 3 85918 94.707 94.707 1 0.94567 1.0601 0 54704000 30663000 24041000 2485 2081 913 941 3881;3882;3883 3883 ANNPGIVLTFVLPTEQFHLGK 21 1 0 Unmodified _ANNPGIVLTFVLPTEQFHLGK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.7593 3 765.754711 2294.2423 72345.88 0.20742 0.00015883 0.097639 7.4768E-05 0.30506 0.0002336 766.088621010335 768.759739001492 128.64 0.6216 128.64 128.54 129.16 0 184 57 7 0 0 0 2.6853E-08 1 85951 69.122 69.122 1 0.97878 0.99528 0 30280000 13240000 17040000 2486 2081 913 941 3884 3884 ANNSQEPSPQLASSVASTR 19 0 1 Unmodified _ANNSQEPSPQLASSVASTR_ 0 0 0 B7Z8X5;Q4W5K9;Q59FC9;B7Z481;A0A024RDE8;Q96HC4;H0Y8Y3 B7Z8X5 B7Z8X5 LIM;PDLIM5 PDZ and LIM domain protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.4794 2 972.4745 1942.93445 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.382 1 54.382 53.882 54.882 0 0 0 0 8.3908E-05 1 31077 67.115 60.883 1 2487 1105 914 942 3885 3885 ANPALYVLR 9 0 1 Unmodified _ANPALYVLR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.8022 2 508.798009 1015.58147 85924.45 0.31884 0.00016223 0.39095 0.00019892 0.7098 0.00036114 508.798163209679 513.802255759913 81.033 0.77754 81.033 80.724 81.502 0 233 65 6 0 0 0 0.0030463 2 48147 72.789 39.239 1 0.91046 0.95484 0 39346000 21347000 17998000 2488 1854 915 943 3886;3887 3886 ANPALYVLR 9 0 1 Unmodified _ANPALYVLR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.8025 2 508.798009 1015.58147 85415.38 0.58424 0.00029726 0.93025 0.00047331 1.5145 0.00077057 508.798021636058 513.802157328372 79.85 0.76461 79.85 79.409 80.174 0 266 58 7 0 0 0 0.00096334 2 48517 91.9 58.35 1 0.78674 0.86614 0 41004000 22383000 18621000 2489 1854 915 943 3888;3889 3889 ANPALYVLR 9 0 1 Unmodified _ANPALYVLR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 508.7982 2 508.798009 1015.58147 84278.16 0.45002 0.00022897 1.2513 0.00063664 1.7013 0.00086561 508.798310390789 513.802151767593 92.599 0.71516 92.599 92.266 92.982 0 139 39 6 0 0 0 0.039815 1 51526 42.109 32.08 1 0.79759 0.67124 0 4526800 2343800 2183000 2490 1854 915 943 3890 3890 ANPALYVLR 9 0 1 Unmodified _ANPALYVLR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.8018 2 508.798009 1015.58147 84464.72 0.18848 9.5899E-05 0.61891 0.0003149 0.80739 0.0004108 508.798282440848 513.802149524687 92.425 0.6324 92.425 92.057 92.69 0 109 31 5 0 0 0 0.056712 1 50706 36.395 26.807 1 0.88131 0.77885 0 3686400 1951600 1734800 2491 1854 915 943 3891 3891 ANPDPNCCLGVFGLSLYTTER 21 0 1 Unmodified _ANPDPNCCLGVFGLSLYTTER_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1198.0598 2 1192.55411 2383.09367 55312.84 0.15315 0.00018264 -0.85424 -0.0010187 -0.7011 -0.0008361 1193.05488234455 1198.05952341064 121.04 0.45491 121.04 120.82 121.27 0 217 30 9 0 0 0 5.3858E-08 2 78008 72.417 72.417 1 1.1192 1.2014 0 46640000 22099000 24541000 2492 889 916 944 3892;3893 3892 ANPDPNCCLGVFGLSLYTTER 21 0 1 Unmodified _ANPDPNCCLGVFGLSLYTTER_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1193.0559 2 1192.55411 2383.09367 55356.23 0.21071 0.00025128 -0.43314 -0.00051654 -0.22244 -0.00026527 1193.05527682934 1198.05951605529 120.6 0.48434 120.6 120.37 120.85 -7.6294E-06 257 34 10 0 0 0 1.4023E-07 2 79608 63.894 63.894 1 1.1218 1.3064 0 60891000 27804000 33087000 2493 889 916 944 3894;3895 3895 ANPDPNCCLGVFGLSLYTTER 21 0 1 Unmodified _ANPDPNCCLGVFGLSLYTTER_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1197.5604 2 1192.55411 2383.09367 54936.6 0.21744 0.00025931 -0.46186 -0.0005508 -0.24442 -0.00029149 1192.55364946569 1198.05959392225 133.41 0.47421 133.41 133.14 133.61 0 157 20 10 0 0 0 0.030284 1 81116 22.097 22.097 1 0.89083 0.74122 0 21914000 11723000 10191000 2494 889 916 944 3896 3896 ANPDPNTCLGVFGLSLYTTER 21 0 1 Unmodified _ANPDPNTCLGVFGLSLYTTER_ 0 0 0 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1169.0687 2 1163.06262 2324.1107 56647.16 0.055547 6.4604E-05 -0.83808 -0.00097474 -0.78253 -0.00091014 1163.06300521418 1168.56613087891 121.74 0.63301 121.74 121.34 121.98 7.6294E-06 153 46 6 0 0 0 1.9685E-06 2 80598 49.482 42.453 1 1.1095 1.1014 0 16053000 8761400 7291900 2495 1716 917 945 3897;3898 3898 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 352.8463 3 352.845557 1055.51484 98648.75 -0.096259 -3.3964E-05 0.05256 1.8545E-05 -0.043699 -1.5419E-05 352.845753120516 355.516940414749 19.95 0.98436 19.95 19.752 20.737 -1.9073E-06 135 37 9 0 0 0 0.00023624 2 6344 57.164 51.838 1 0.78245 0.93232 0 666710000 383870000 282830000 2496 744 918 946 3899;3900 3899 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.7723 2 528.764697 1055.51484 NaN NaN NaN -1.8077 -0.00095583 NaN NaN NaN NaN 19.952 1.4378 19.952 19.752 21.19 1.9073E-06 0 0 0 1.2691E-11 2 6320 119.21 87.979 1 NaN NaN 0 1631700000 0 1631700000 2497 744 918 946 3901;3902 3901 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.7659 2 528.764697 1055.51484 NaN NaN NaN 0.81439 0.00043062 NaN NaN NaN NaN 19.952 1.5309 19.952 19.706 21.237 0 0 0 0 1.2345E-11 1 6321 119.53 71.68 1 NaN NaN 0 2226700000 2226700000 0 2498 744 918 946 3903 3903 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 352.8456 3 352.845557 1055.51484 99828.83 -0.19492 -6.8776E-05 -0.41602 -0.00014679 -0.61094 -0.00021557 352.845635356428 355.51675235544 19.66 1.1142 19.66 19.336 20.45 0 232 45 10 0 0 0 0.00034113 2 5887 58.172 58.172 1 0.8232 0.96997 0 574230000 332610000 241620000 2499 744 918 946 3904;3905 3904 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.7645 2 528.764697 1055.51484 NaN NaN NaN 0.51289 0.0002712 NaN NaN NaN NaN 19.665 1.4642 19.665 19.364 20.829 0 0 0 0 0.0049325 2 6847 65.535 50.154 1 NaN NaN 0 2071600000 2071600000 0 2500 744 918 946 3906;3907 3907 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.7648 2 528.764697 1055.51484 81854.18 -0.078076 -4.1284E-05 -0.0050197 -2.6542E-06 -0.083096 -4.3938E-05 528.765916651624 532.771960333929 20.497 1.0519 20.497 20.085 21.137 1.9073E-06 152 63 10 0 0 0 1.0869E-16 2 5887 153.7 124.84 1 1.6472 1.5042 0 1211100000 444030000 767040000 2501 744 918 946 3908;3909 3909 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 355.5168 3 352.845557 1055.51484 99408.16 -0.45651 -0.00016108 0.41431 0.00014619 -0.042206 -1.4892E-05 352.845782970579 355.51706942255 20.497 0.86677 20.497 20.27 21.137 1.9073E-06 156 56 9 0 0 0 0.00093909 2 5889 52.837 52.837 1 1.8245 1.5935 0 174440000 60887000 113550000 2502 744 918 946 3910;3911 3910 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 355.5167 3 352.845557 1055.51484 99631.03 -0.47646 -0.00016812 -0.047326 -1.6699E-05 -0.52379 -0.00018482 352.84572786433 355.516963229043 20.482 1.4186 20.482 20.152 21.571 0 302 66 10 0 0 0 0.0063669 2 5339 53.013 50.176 1 1.701 1.4524 0 102230000 37647000 64582000 2503 744 918 946 3912;3913 3912 ANPQVGVAFPHIK 13 1 0 Unmodified _ANPQVGVAFPHIK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.887 2 689.385511 1376.75647 73789.14 0.62037 0.00042767 -0.15983 -0.00011018 0.46054 0.00031749 689.385581213883 693.392372144122 72.291 0.74387 72.291 71.989 72.733 0 329 67 7 0 0 0 6.8494E-06 2 43254 104.05 104.05 1 0.33655 0.37832 0 73110000 48425000 24685000 2504 1476 919 947 3914;3915 3914 ANPQVGVAFPHIK 13 1 0 Unmodified _ANPQVGVAFPHIK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.3864 2 689.385511 1376.75647 74054.69 0.46204 0.00031852 -0.18288 -0.00012607 0.27916 0.00019245 689.385580278524 693.391867946725 84.163 0.60548 84.163 83.914 84.519 0 240 49 7 0 0 0 0.034531 1 45812 32.606 28.719 1 0.29361 0.22817 0 15196000 11228000 3967500 2505 1476 919 947 3916 3916 ANPQVGVAFPHIK 13 1 0 Unmodified _ANPQVGVAFPHIK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3868 2 689.385511 1376.75647 73910.45 0.68614 0.00047301 -0.55381 -0.00038179 0.13233 9.1227E-05 689.385421462237 693.391366356098 84.13 0.65585 84.13 83.822 84.478 0 228 52 6 0 0 0 0.061889 1 44950 26.673 26.673 1 0.30731 0.24682 0 15254000 11626000 3627000 2506 1476 919 947 3917 3917 ANPTQLNTVEFLWDPAK 17 1 0 Unmodified _ANPTQLNTVEFLWDPAK_ 0 0 0 A0A024R120;Q12800;F8VWL0;F8VX55 A0A024R120 A0A024R120 TFCP2 Alpha-globin transcription factor CP2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 976.5026 2 972.496715 1942.97888 NaN NaN NaN -1.7368 -0.001689 NaN NaN NaN NaN 119.57 0.44351 119.57 119.37 119.82 0 0 0 0 0.043222 1 77013 33.685 20.705 1 NaN NaN 0 3445300 0 3445300 2507 66 920 948 3918 3918 ANPTQLNTVEFLWDPAK 17 1 0 Unmodified _ANPTQLNTVEFLWDPAK_ 0 0 0 A0A024R120;Q12800;F8VWL0;F8VX55 A0A024R120 A0A024R120 TFCP2 Alpha-globin transcription factor CP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 972.4965 2 972.496715 1942.97888 61484.95 0.44596 0.00043369 -0.58387 -0.00056781 -0.13791 -0.00013412 972.99817865687 977.004684917701 119.13 0.29096 119.13 119.02 119.32 0 78 19 7 0 0 0 0.00092457 2 78509 44.457 44.457 1 1.1184 1.1277 0 7668000 4659700 3008300 2508 66 920 948 3919;3920 3920 ANSHFLVSAGSDR 13 0 1 Unmodified _ANSHFLVSAGSDR_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6;H7C3X9 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.8389 2 680.83384 1359.65313 NaN NaN NaN 0.44854 0.00030538 NaN NaN NaN NaN 33.238 0.14 33.238 33.161 33.301 0 0 0 0 0.0034354 1 16633 65.179 53.313 1 NaN NaN 0 2936700 0 2936700 2509 1938 921 949 3921 3921 ANSNLVLQADR 11 0 1 Unmodified _ANSNLVLQADR_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.8246 2 600.820201 1199.62585 77964.82 0.91527 0.00054992 -0.25007 -0.00015025 0.6652 0.00039967 600.819768344991 605.824245383962 45.201 0.74354 45.201 44.809 45.552 0 255 66 6 0 0 0 3.0366E-05 2 24201 100.88 100.88 1 0.98145 1.0855 0 59232000 30204000 29028000 2510 1411 922 950 3922;3923 3922 ANSNLVLQADR 11 0 1 Unmodified _ANSNLVLQADR_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.8242 2 600.820201 1199.62585 77799.87 0.88133 0.00052952 -0.35319 -0.0002122 0.52814 0.00031732 600.819770655408 605.824185313773 44.411 0.60292 44.411 44.05 44.653 0 248 53 7 0 0 0 0.0035925 1 24105 59.542 59.542 1 0.96512 1.1048 0 85632000 44968000 40664000 2511 1411 922 950 3924 3924 ANSNLVLQADR 11 0 1 Unmodified _ANSNLVLQADR_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.8236 2 600.820201 1199.62585 78000.86 0.27531 0.00016541 -0.0011378 -6.836E-07 0.27418 0.00016473 600.819949834516 605.824238084255 52.03 0.54064 52.03 51.783 52.324 -3.8147E-06 208 47 6 0 0 0 0.0086859 2 25640 50.353 38.128 1 1.1995 1.0217 0 5481000 2435400 3045600 2512 1411 922 950 3925;3926 3925 ANSNLVLQADR 11 0 1 Unmodified _ANSNLVLQADR_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.82 2 600.820201 1199.62585 78003.35 0.39168 0.00023533 -0.37018 -0.00022241 0.021496 1.2915E-05 600.819721435106 605.82402748473 52.392 0.66322 52.392 52.027 52.69 0 221 53 6 0 0 0 0.014428 2 25268 46.844 32.537 1 1.116 0.98649 0 3790400 1801700 1988700 2513 1411 922 950 3927;3928 3928 ANSNPFEVK 9 1 0 Unmodified _ANSNPFEVK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.2607 2 503.253631 1004.49271 84544.78 0.37099 0.0001867 -0.61964 -0.00031184 -0.24865 -0.00012513 503.253624318565 507.260402591432 43.821 0.78106 43.821 43.384 44.165 0 278 69 6 0 0 0 1.0685E-07 2 23426 138.78 114.83 1 0.915 1.0358 0 88644000 45973000 42671000 2514 790 923 951 3929;3930 3929 ANSNPFEVK 9 1 0 Unmodified _ANSNPFEVK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.2623 2 503.253631 1004.49271 84451.6 0.42142 0.00021208 0.045277 2.2786E-05 0.46669 0.00023487 503.253745733017 507.260659680643 42.988 0.86918 42.988 42.66 43.53 0 213 71 6 0 0 0 0.023107 1 23112 48.794 35.757 1 1.0645 1.1917 0 54042000 25520000 28522000 2515 790 923 951 3931 3931 ANSNPFEVK 9 1 0 Unmodified _ANSNPFEVK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.2611 2 503.253631 1004.49271 86454.83 -0.0055258 -2.7809E-06 0.11625 5.8501E-05 0.11072 5.5721E-05 503.253926997456 507.260624978479 50.552 1.1973 50.552 49.974 51.171 -3.8147E-06 347 89 6 0 0 0 0.050765 1 24080 37.727 27.947 1 1.1161 0.91445 0 4988000 2372700 2615300 2516 790 923 951 3932 3932 ANTVTPAVGR 10 0 1 Unmodified _ANTVTPAVGR_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.2751 2 493.274898 984.535243 85306.74 0.088919 4.3861E-05 -0.21764 -0.00010736 -0.12873 -6.3497E-05 493.27486085356 498.278660378985 29.187 0.81836 29.187 28.964 29.782 0 197 60 7 0 0 0 0.0035438 2 11841 64.04 46.055 1 1.4649 1.2143 0 11116000 4477900 6638200 2517 1789 924 952 3933;3934 3934 ANTVTPAVGR 10 0 1 Unmodified _ANTVTPAVGR_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.275 2 493.274898 984.535243 87176.24 -0.20227 -9.9774E-05 0.060905 3.0043E-05 -0.14136 -6.9731E-05 493.274961045267 498.278830251624 29.33 0.74646 29.33 29.072 29.818 0 170 47 8 0 0 0 0.0029784 2 11384 66.621 42.034 1 1.4655 1.1848 0 11554000 4574100 6979900 2518 1789 924 952 3935;3936 3936 ANVELDHATLVR 12 0 1 Unmodified _ANVELDHATLVR_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59;A0A0S2Z5C1;A0A087WXC6 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.2477 3 446.577247 1336.70991 NaN NaN NaN 1.3805 0.00061648 NaN NaN NaN NaN 52.272 0.73613 52.272 51.911 52.647 0 0 0 0 0.0026347 1 28957 56.122 44.887 1 NaN NaN 0 28107000 0 28107000 2519 582 925 953 3937 3937 ANVNEILDFFHGYR 14 0 1 Unmodified _ANVNEILDFFHGYR_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.9489 3 565.614361 1693.82125 82222.52 0.71379 0.00040373 -0.0569 -3.2184E-05 0.65689 0.00037155 565.948263129926 568.950481465986 117.49 0.58923 117.49 117.19 117.78 0 188 40 6 0 0 0 6.6639E-05 2 75233 66.989 66.989 1 1.1686 1.2209 0 10644000 5268700 5375000 2520 1122 926 954 3938;3939 3938 ANVNEILDFFHGYR 14 0 1 Unmodified _ANVNEILDFFHGYR_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.9482 3 565.614361 1693.82125 81833.05 0.63749 0.00036057 -0.10362 -5.8608E-05 0.53387 0.00030197 565.614093122756 568.95027774379 116.69 0.54159 116.69 116.44 116.98 0 180 33 7 0 0 0 0.00063236 2 76286 49.483 49.483 1 1.1255 1.1231 0 16707000 7952300 8755000 2521 1122 926 954 3940;3941 3941 ANVNEILDFFHGYR 14 0 1 Unmodified _ANVNEILDFFHGYR_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.6144 3 565.614361 1693.82125 82670.93 0.9666 0.00054672 -0.31101 -0.00017591 0.65559 0.00037081 565.613918749666 569.284815260552 128.79 0.43715 128.79 128.58 129.01 0 99 19 7 0 0 0 0.0036016 2 77816 36.292 36.292 1 1.2167 1.0471 0 2677600 1274800 1402700 2522 1122 926 954 3942;3943 3943 ANVNEILDFFHGYR 14 0 1 Unmodified _ANVNEILDFFHGYR_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.9515 3 565.614361 1693.82125 81692.63 0.79775 0.00045122 -0.30738 -0.00017386 0.49038 0.00027737 565.614037193784 568.950274674918 128.5 0.51064 128.5 128.32 128.83 0 92 20 7 0 0 0 0.00045603 2 76696 53.377 53.377 1 1.0996 0.97851 0 2356800 1140400 1216300 2523 1122 926 954 3944;3945 3944 ANVVGNVWR 9 0 1 Unmodified _ANVVGNVWR_ 0 0 0 Q58F09;Q13724;A8K9K4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.7783 2 507.777608 1013.54066 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.692 1 58.692 58.192 59.192 0 0 0 0 0.013074 1 34135 60.682 37.253 1 2524 1720 927 955 3946 3946 ANWYFLLAR 9 0 1 Unmodified _ANWYFLLAR_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;A0A0S2Z3A5;B4DJE7;B4DVE0 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.3124 2 577.311284 1152.60801 82152.26 0.59266 0.00034215 -0.034065 -1.9666E-05 0.55859 0.00032248 577.311191495448 582.315275501839 116.2 0.57961 116.2 115.92 116.5 0 111 36 5 0 0 0 0.0021719 2 74127 75.854 68.661 1 2.1468 2.2089 0 6352200 1965000 4387200 2525 545 928 956 3947;3948 3948 ANWYFLLAR 9 0 1 Unmodified _ANWYFLLAR_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;A0A0S2Z3A5;B4DJE7;B4DVE0 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3121 2 577.311284 1152.60801 82773.21 0.83332 0.00048108 0.25552 0.00014752 1.0888 0.0006286 577.311117687275 582.315510712528 115.43 0.57663 115.43 115.15 115.72 0 102 36 5 0 0 0 0.012771 1 75335 57.177 52.767 1 2.8444 2.8676 0 6361300 1633000 4728300 2526 545 928 956 3949 3949 ANYAVDAYFR 10 0 1 Unmodified _ANYAVDAYFR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.2905 2 595.285463 1188.55637 78715.76 0.49167 0.00029269 0.15916 9.4747E-05 0.65083 0.00038743 595.285570486752 600.289619799199 77.676 0.82069 77.676 77.29 78.111 0 296 64 6 0 0 0 0.0010698 2 45724 76.679 65.085 1 2.3778 2.6871 0 102450000 27986000 74465000 2527 1391 929 957 3950;3951 3950 ANYAVDAYFR 10 0 1 Unmodified _ANYAVDAYFR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.2858 2 595.285463 1188.55637 NaN NaN NaN 0.60001 0.00035718 NaN NaN NaN NaN 76.62 0.69994 76.62 76.257 76.957 0 0 0 0 0.048381 1 46139 47.198 43.626 1 NaN NaN 0 35467000 35467000 0 2528 1391 929 957 3952 3952 ANYAVDAYFR 10 0 1 Unmodified _ANYAVDAYFR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.2858 2 595.285463 1188.55637 77553.29 0.7652 0.00045551 0.43504 0.00025897 1.2002 0.00071449 595.285616592341 600.289676209435 89.027 1.2034 89.027 88.563 89.766 7.6294E-06 342 78 8 0 0 0 0.024135 2 49043 45.161 45.161 1 4.8821 4.1671 0 37658000 6528600 31130000 2529 1391 929 957 3953;3954 3954 APAHHPAAISTAK 13 1 0 Unmodified _APAHHPAAISTAK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.2382 3 424.566683 1270.67822 96453.8 -0.2554 -0.00010843 -0.040726 -1.7291E-05 -0.29613 -0.00012573 424.566606747632 427.237950200331 15.267 0.49918 15.267 15.182 15.681 0 93 32 7 0 0 0 4.5808E-10 2 3011 103.97 98.098 1 1.3276 1.3083 0 19533000 7375300 12158000 2530 907 930 958 3955;3956 3955 APAHHPAAISTAK 13 1 0 Unmodified _APAHHPAAISTAK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.3542 2 636.346386 1270.67822 76869.53 0.25201 0.00016037 -0.022095 -1.406E-05 0.22992 0.00014631 636.346294824431 640.353431566275 15.293 0.26755 15.293 15.133 15.401 0 44 10 6 0 0 0 1.0868E-38 2 3024 181.53 158.21 1 1.5445 1.617 0 15152000 5816700 9335800 2531 907 930 958 3957;3958 3957 APAHHPAAISTAK 13 1 0 Unmodified _APAHHPAAISTAK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.2377 3 424.566683 1270.67822 94009.88 -0.43093 -0.00018296 -0.040298 -1.7109E-05 -0.47123 -0.00020007 424.566646288677 427.23805622396 15.175 0.49076 15.175 15.027 15.518 0 58 17 6 0 0 0 4.0836E-05 2 2878 104.59 99.836 1 1.338 1.3674 0 31555000 13257000 18298000 2532 907 930 958 3959;3960 3959 APAHHPAAISTAK 13 1 0 Unmodified _APAHHPAAISTAK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3536 2 636.346386 1270.67822 75794.85 0.16739 0.00010652 0.058758 3.739E-05 0.22615 0.00014391 636.346166952643 640.353610184543 15.187 0.30714 15.187 15.094 15.401 0 19 7 6 0 0 0 0.00011347 2 2880 76.228 63.804 1 1.6347 1.7013 0 19017000 6855600 12161000 2533 907 930 958 3961;3962 3961 APAHHPAAISTAK 13 1 0 Unmodified _APAHHPAAISTAK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 427.2381 3 424.566683 1270.67822 90643.65 -0.7931 -0.00033672 0.70676 0.00030006 -0.08634 -3.6657E-05 424.566959007377 427.238322092874 15.632 0.31721 15.632 15.507 15.824 -9.5367E-07 126 22 9 0 0 0 7.6559E-05 2 2648 58.116 58.116 1 1.176 0.9633 0 4957200 2203500 2753600 2534 907 930 958 3963;3964 3963 APAHHPAAISTAK 13 1 0 Unmodified _APAHHPAAISTAK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.3539 2 636.346386 1270.67822 75524.34 0.20889 0.00013293 0.42039 0.00026752 0.62928 0.00040044 636.346642741691 640.353703742477 15.657 0.30829 15.657 15.507 15.815 9.5367E-07 107 21 7 0 0 0 0.0010174 2 2649 59.542 55.243 1 1.2156 0.9639 0 2348400 1023700 1324700 2535 907 930 958 3965;3966 3965 APAMFNIR 8 0 1 Oxidation (M) _APAM(ox)FNIR_ APAM(1)FNIR APAM(49.59)FNIR 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;H0Y9Y4;D6RI02 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.2421 2 468.242012 934.469472 NaN NaN NaN 0.016928 7.9262E-06 NaN NaN NaN NaN 46.825 0.51109 46.825 46.46 46.971 3.8147E-06 0 0 0 0.01585 1 25203 49.59 49.59 1 NaN NaN 0 65328000 65328000 0 2536 742 931 959 3967 3967 577 APAMFNIR 8 0 1 Oxidation (M) _APAM(ox)FNIR_ APAM(1)FNIR APAM(86.84)FNIR 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;H0Y9Y4;D6RI02 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.2422 2 468.242012 934.469472 87501.28 0.14453 6.7676E-05 0.053323 2.4968E-05 0.19786 9.2644E-05 468.241987210635 473.246051666585 45.784 0.63593 45.784 45.511 46.147 0 256 55 6 0 0 0 0.0031662 2 25097 86.838 66.283 1 1.2649 1.4426 0 140060000 59715000 80342000 2537 742 931 959 3968;3969 3968 577 APAMFNIR 8 0 1 Oxidation (M) _APAM(ox)FNIR_ APAM(1)FNIR APAM(50.97)FNIR 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;H0Y9Y4;D6RI02 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 468.2414 2 468.242012 934.469472 85875.06 0.32427 0.00015184 -0.11249 -5.2672E-05 0.21178 9.9165E-05 468.24187146079 473.246056092924 54.275 0.9912 54.275 53.913 54.904 -3.8147E-06 276 73 6 0 0 0 0.015466 1 27061 50.966 47.032 1 0.77895 0.65837 0 9516500 5501800 4014700 2538 742 931 959 3970 3970 577 APAMFNIR 8 0 1 Oxidation (M) _APAM(ox)FNIR_ APAM(1)FNIR APAM(59.21)FNIR 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;H0Y9Y4;D6RI02 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 468.2422 2 468.242012 934.469472 NaN NaN NaN 0.13944 6.5291E-05 NaN NaN NaN NaN 53.666 0.65641 53.666 53.29 53.947 0 0 0 0 0.009373 1 26601 59.205 41.82 1 NaN NaN 0 4337100 4337100 0 2539 742 931 959 3971 3971 577 APAMFNIR 8 0 1 Oxidation (M) _APAM(ox)FNIR_ APAM(1)FNIR APAM(62.71)FNIR 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;H0Y9Y4;D6RI02 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.2419 2 468.242012 934.469472 85254.29 0.16737 7.8369E-05 -0.28228 -0.00013218 -0.11491 -5.3807E-05 468.241935928693 473.246055474618 54.509 1.0416 54.509 54.187 55.228 3.8147E-06 353 79 8 0 0 0 0.0070565 1 26647 62.714 50.993 1 0.7099 0.59012 0 7572700 4294500 3278300 2540 742 931 959 3972 3972 577 APAMFNIR 8 0 1 Oxidation (M) _APAM(ox)FNIR_ APAM(1)FNIR APAM(47.07)FNIR 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;H0Y9Y4;D6RI02 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.2426 2 468.242012 934.469472 NaN NaN NaN 0.12254 5.738E-05 NaN NaN NaN NaN 53.846 0.66442 53.846 53.546 54.211 0 0 0 0 0.017851 1 26091 47.067 47.067 1 NaN NaN 0 4314600 4314600 0 2541 742 931 959 3973 3973 577 APAMFNIR 8 0 1 Unmodified _APAMFNIR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;H0Y9Y4;D6RI02 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 460.2441 2 460.244555 918.474557 91011.23 0.21246 9.7785E-05 0.10266 4.7247E-05 0.31512 0.00014503 460.2446066478 465.248713867535 81.001 0.77789 81.001 80.658 81.436 0 225 51 6 0 0 0 0.052049 2 42874 43 39.147 1 1.0677 0.88732 0 5049100 2366700 2682400 2542 742 931 960 3974;3975 3975 APAMQPAEIQFAQR 14 0 1 Oxidation (M) _APAM(ox)QPAEIQFAQR_ APAM(1)QPAEIQFAQR APAM(97.81)QPAEIQFAQR 0 1 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.3987 2 787.393207 1572.77186 68209.34 0.52631 0.00041441 -0.54801 -0.0004315 -0.021694 -1.7082E-05 787.893971933358 792.396632045287 59.114 0.49463 59.114 58.941 59.436 0 127 38 7 0 0 0 9.2019E-06 2 33542 97.813 82.841 1 1.5987 1.6667 0 21511000 8988100 12523000 2543 1740 932 961 3976;3977 3976 1575 APAMQPAEIQFAQR 14 0 1 Oxidation (M) _APAM(ox)QPAEIQFAQR_ APAM(1)QPAEIQFAQR APAM(107.06)QPAEIQFAQR 0 1 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.3915 2 787.393207 1572.77186 68925.06 0.47833 0.00037664 -0.32465 -0.00025563 0.15368 0.00012101 787.393238055226 792.397257042473 58.045 0.34032 58.045 57.886 58.227 0 118 27 6 0 0 0 9.2432E-07 1 33639 107.06 92.083 1 1.4954 1.5806 0 23551000 10426000 13125000 2544 1740 932 961 3978 3978 1575 APAMQPAEIQFAQR 14 0 1 Oxidation (M) _APAM(ox)QPAEIQFAQR_ APAM(1)QPAEIQFAQR APAM(66.66)QPAEIQFAQR 0 1 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.8999 2 787.393207 1572.77186 68470.36 0.51578 0.00040613 0.1099 8.6533E-05 0.62568 0.00049266 787.895278676411 792.397458942145 68.6 0.49931 68.6 68.427 68.927 0 127 38 6 0 0 0 0.00010601 1 35829 66.663 51.691 1 1.828 1.5271 0 3326600 1221700 2104900 2545 1740 932 961 3979 3979 1575 APASSLHTQEAGR 13 0 1 Unmodified _APASSLHTQEAGR_ 0 0 0 O95425;B4E3H1;Q659E9;A0A0J9YWY6 O95425 O95425 SVIL;DKFZp586H1823 Supervillin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8397 2 662.83384 1323.65313 72034.36 0.79849 0.00052927 -1.2564 -0.00083276 -0.45787 -0.00030349 662.833483490887 667.83775311527 16.87 0.13655 16.87 16.777 16.913 0 10 4 4 0 0 0 0.010686 1 3936 41.399 36.787 1 1.8761 2.0111 0 3461500 1144900 2316600 2546 1425 933 962 3980 3980 APASVLPAATPR 12 0 1 Unmodified _APASVLPAATPR_ 0 0 0 A0A0S2Z472;A8KAH7;A0A024R2W3;P13861;C9J830;A0A0K0K1I3 A0A0S2Z472 A0A0S2Z472 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.8326 2 575.83258 1149.65061 80778.58 0.46222 0.00026616 0.27111 0.00015611 0.73333 0.00042227 575.832648389619 580.836841681372 56.372 0.48858 56.372 56.132 56.62 -3.8147E-06 88 35 4 0 0 0 0.0012602 1 32454 61.593 46.333 1 1.8249 1.8351 0 11036000 3930000 7106000 2547 124 934 963 3981 3981 APDDLVAPVVK 11 1 0 Unmodified _APDDLVAPVVK_ 0 0 0 Q6IAP9;Q5T1M7;Q59EL4;O43172;B2R7V4 Q6IAP9 Q6IAP9 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.3286 2 562.321514 1122.62847 83247.38 0.74641 0.00041972 0.16376 9.2087E-05 0.91017 0.00051181 562.321287371002 566.32837146044 75.847 0.39347 75.847 75.593 75.986 0 158 34 6 0 0 0 9.8957E-09 2 44683 123.86 111.81 1 1.2133 1.2515 0 17309000 7509800 9799600 2548 1381 935 964 3982;3983 3983 APDDLVAPVVK 11 1 0 Unmodified _APDDLVAPVVK_ 0 0 0 Q6IAP9;Q5T1M7;Q59EL4;O43172;B2R7V4 Q6IAP9 Q6IAP9 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.3286 2 562.321514 1122.62847 82987.06 0.59588 0.00033508 -0.41369 -0.00023263 0.18219 0.00010245 562.321205271507 566.328301725654 74.725 0.38063 74.725 74.496 74.876 0 133 33 6 0 0 0 0.00015639 2 44989 94.692 94.692 1 1.3699 1.3898 0 29677000 12303000 17374000 2549 1381 935 964 3984;3985 3985 APDDLVAPVVK 11 1 0 Unmodified _APDDLVAPVVK_ 0 0 0 Q6IAP9;Q5T1M7;Q59EL4;O43172;B2R7V4 Q6IAP9 Q6IAP9 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.3287 2 562.321514 1122.62847 82529.39 0.53221 0.00029927 0.056408 3.172E-05 0.58862 0.00033099 562.321568946998 566.328518583719 86.138 0.53379 86.138 85.854 86.388 0 129 37 5 0 0 0 0.03746 1 47215 36.424 30.12 1 0.80121 0.66948 0 1816100 1033600 782460 2550 1381 935 964 3986 3986 APDEETLIALLAHAK 15 1 0 Unmodified _APDEETLIALLAHAK_ 0 0 0 Q96ME4;J3KQ48;Q9Y3E5 Q96ME4 Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.2947 3 531.294517 1590.86172 83939.55 0.79513 0.00042245 -0.60746 -0.00032274 0.18767 9.9708E-05 531.294195280748 534.299825394299 115.69 0.49144 115.69 115.44 115.93 7.6294E-06 149 33 6 0 0 0 0.0019928 2 73571 36.445 36.445 1 0.72645 0.75257 0 11222000 5979300 5242300 2551 1329 936 965 3987;3988 3987 APDEETLIALLAHAK 15 1 0 Unmodified _APDEETLIALLAHAK_ 0 0 0 Q96ME4;J3KQ48;Q9Y3E5 Q96ME4 Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.2938 3 531.294517 1590.86172 84834.22 0.65118 0.00034597 -0.30059 -0.0001597 0.35059 0.00018627 531.294209069689 533.965556608699 114.97 0.4799 114.97 114.76 115.24 0 139 30 7 0 0 0 0.00024131 2 74881 50.088 50.088 1 0.70355 0.71225 0 13026000 7500700 5525700 2552 1329 936 965 3989;3990 3990 APDEETLIALLAHAK 15 1 0 Unmodified _APDEETLIALLAHAK_ 0 0 0 Q96ME4;J3KQ48;Q9Y3E5 Q96ME4 Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.3002 3 531.294517 1590.86172 83680.16 0.41374 0.00021982 -0.041604 -2.2104E-05 0.37214 0.00019771 531.29440747791 533.96581062305 127.32 0.48217 127.32 127.11 127.59 0 111 19 8 0 0 0 0.043413 2 76668 17.252 17.252 1 0.96613 0.77273 0 8824700 4642200 4182500 2553 1329 936 965 3991;3992 3992 APDVAPEEVDESK 13 1 0 Unmodified _APDVAPEEVDESK_ 0 0 0 D3DTX6;Q96SB3 D3DTX6 D3DTX6 PPP1R9B Neurabin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.3347 2 693.325179 1384.6358 73832.08 0.67964 0.00047121 0.78869 0.00054682 1.4683 0.001018 693.827135280466 697.332379579206 39.425 0.25574 39.425 39.271 39.527 -3.8147E-06 42 20 4 0 0 0 0.00012689 2 20411 78.653 67.059 1 1.1086 1.0905 0 8660400 4398500 4262000 2554 1190 937 966 3993;3994 3993 APDVAPEEVDESK 13 1 0 Unmodified _APDVAPEEVDESK_ 0 0 0 D3DTX6;Q96SB3 D3DTX6 D3DTX6 PPP1R9B Neurabin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.3329 2 693.325179 1384.6358 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.503 1 38.503 38.003 39.003 0 0 0 0 0.0046125 1 20239 59.84 47.78 1 2555 1190 937 966 3995 3995 APEAAAAEREEVAYDPEDETILEEAK 26 1 1 Unmodified _APEAAAAEREEVAYDPEDETILEEAK_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.1222 3 949.445324 2845.31414 63310 0.80442 0.00076375 -0.24095 -0.00022877 0.56347 0.00053498 950.113461667236 955.452351205077 86.896 0.46889 86.896 86.6 87.069 0 159 32 7 0 0 0 7.3874E-14 2 52335 83.312 80.267 1 0.6112 0.68049 0 19974000 11116000 8857500 2556 2002 938 967 3996;3997 3997 APEDFSQNWK 10 1 0 Unmodified _APEDFSQNWK_ 0 0 0 Q9GZR2;A0A0C4DG31 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.2866 2 611.280377 1220.5462 78874.84 0.30541 0.00018669 0.39809 0.00024334 0.7035 0.00043003 611.280898978127 615.287550195866 61.742 1.138 61.742 61.363 62.501 0 256 87 4 0 0 0 0.010458 1 31005 53.327 43.97 1 0.83641 0.68981 0 1837700 922690 915050 2557 2021 939 968 3998 3998 APEMTNELK 9 1 0 Unmodified _APEMTNELK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.7619 2 516.755149 1031.49575 85077.94 0.036289 1.8752E-05 0.018651 9.6382E-06 0.05494 2.8391E-05 516.755048641881 520.7621466177 40.997 0.43131 40.997 40.764 41.196 0 121 34 6 0 0 0 0.017472 1 18470 52.937 38.941 1 1.56 1.258 0 2996500 1154800 1841700 2558 1813 940 969 3999 3999 APEPTPQQVAQQQ 13 0 0 Unmodified _APEPTPQQVAQQQ_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.3972 2 711.354605 1420.69466 NaN NaN NaN -1.3066 -0.00092945 NaN NaN NaN NaN 44.438 0.95186 44.438 43.92 44.872 0 0 0 0 4.326E-06 2 24094 102.52 93.625 1 2559 515 941 970 4000;4001 4001 APEPTPQQVAQQQ 13 0 0 Unmodified _APEPTPQQVAQQQ_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3541 2 711.354605 1420.69466 NaN NaN NaN -1.0721 -0.00076262 NaN NaN NaN NaN 43.72 0.69814 43.72 43.465 44.164 0 0 0 0 0.051443 1 23699 39.923 22.45 1 2560 515 941 970 4002 4002 APEQRPAPNAAPVDPTLR 18 0 2 Unmodified _APEQRPAPNAAPVDPTLR_ 0 0 1 Q6P1J9;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.3416 3 634.006029 1898.99626 75875.93 0.68824 0.00043635 -0.10193 -6.4625E-05 0.58631 0.00037172 634.006224678864 640.678032820577 49.221 0.67038 49.221 48.882 49.553 0 235 48 8 0 0 0 2.3928E-05 2 26931 57.496 57.496 1 1.7976 1.9558 0 60747000 25844000 34903000 2561 1851 942 971 4003;4004 4004 APEQRPAPNAAPVDPTLR 18 0 2 Unmodified _APEQRPAPNAAPVDPTLR_ 0 0 1 Q6P1J9;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.6793 3 634.006029 1898.99626 76082.15 0.27473 0.00017418 -0.1966 -0.00012465 0.078124 4.9531E-05 634.340413045058 640.678069842316 47.799 0.52192 47.799 47.63 48.152 0 166 36 8 0 0 0 8.0123E-07 2 26605 86.213 86.213 1 1.7721 2.0407 0 60699000 22672000 38027000 2562 1851 942 971 4005;4006 4005 APEQRPAPNAAPVDPTLR 18 0 2 Unmodified _APEQRPAPNAAPVDPTLR_ 0 0 1 Q6P1J9;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.3406 3 634.006029 1898.99626 77231.07 0.58463 0.00037066 0.023511 1.4906E-05 0.60814 0.00038556 634.340368962661 640.678109521346 56.799 0.48083 56.799 56.581 57.062 -3.8147E-06 127 32 6 0 0 0 0.037882 1 28778 19.319 19.319 1 1.6471 1.4518 0 4179000 1289600 2889400 2563 1851 942 971 4007 4007 APEQRPAPNAAPVDPTLR 18 0 2 Unmodified _APEQRPAPNAAPVDPTLR_ 0 0 1 Q6P1J9;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.6782 3 634.006029 1898.99626 75970.66 0.66821 0.00042365 -0.49779 -0.0003156 0.17041 0.00010804 634.005948129425 640.677991681145 57.354 0.6106 57.354 57.048 57.659 0 143 38 6 0 0 0 0.004384 2 28389 29.766 29.766 1 1.9206 1.7376 0 3893800 1632800 2261000 2564 1851 942 971 4008;4009 4009 APETEPIDVAAHLQLLGESLSLIGHR 26 0 1 Unmodified _APETEPIDVAAHLQLLGESLSLIGHR_ 0 0 0 Q2M3X1;B4DSN8;Q9UGU5 Q2M3X1 Q2M3X1 HMGXB4 HMG domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.6262 4 692.375075 2765.47119 73396.06 0.81354 0.00056327 -0.15183 -0.00010513 0.66171 0.00045815 692.625738714294 694.877021898579 133.02 0.16899 133.02 132.93 133.1 0 31 6 8 0 0 0 0.012838 1 86987 23.74 23.74 1 0.94091 0.94751 0 9388000 4694700 4693300 2565 1030 943 972 4010 4010 APETEPIDVAAHLQLLGESLSLIGHR 26 0 1 Unmodified _APETEPIDVAAHLQLLGESLSLIGHR_ 0 0 0 Q2M3X1;B4DSN8;Q9UGU5 Q2M3X1 Q2M3X1 HMGXB4 HMG domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.3754 4 692.375075 2765.47119 72618.16 0.96566 0.0006686 0.035967 2.4903E-05 1.0016 0.0006935 692.625980399251 695.127679611521 132.97 0.18369 132.97 132.84 133.03 0 56 9 11 0 0 0 0.0006265 1 89172 35.179 35.179 1 1.2546 1.2586 0 17493000 7698800 9793900 2566 1030 943 972 4011 4011 APFDLFENK 9 1 0 Unmodified _APFDLFENK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q58FF7 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.7723 2 540.771657 1079.52876 82614.78 0.85995 0.00046503 0.26367 0.00014259 1.1236 0.00060762 540.771931798844 544.778729447431 93.674 0.7319 93.674 93.454 94.186 -7.6294E-06 257 66 5 0 0 0 0.0019814 2 56850 78.334 66.823 1 1.8012 1.9388 0 33317000 9392800 23924000 2567 379 944 973 4012;4013 4012 APFDLFENK 9 1 0 Unmodified _APFDLFENK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q58FF7 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.7732 2 540.771657 1079.52876 83836.82 0.66668 0.00036052 0.42468 0.00022966 1.0914 0.00059018 540.771670081954 544.778824697207 92.815 0.87297 92.815 92.395 93.268 -7.6294E-06 264 73 6 0 0 0 0.0011742 2 57526 88.948 78.919 1 2.2192 2.2366 0 27994000 11183000 16810000 2568 379 944 973 4014;4015 4015 APFDLFENRK 10 1 1 Unmodified _APFDLFENRK_ 0 0 1 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.8918 3 412.8839 1235.62987 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.351 1 73.351 72.851 73.851 7.6294E-06 0 0 0 0.014996 1 44045 49.3 28.523 1 2569 1348 945 974 4016 4016 APFHQLR 7 0 1 Unmodified _APFHQLR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.7432 2 434.743037 867.471521 90557.06 0.18426 8.0105E-05 0.075553 3.2846E-05 0.25981 0.00011295 434.743053783822 439.747075145412 23.051 0.50447 23.051 22.869 23.373 0 123 25 8 0 0 0 0.023674 2 8984 90.836 72.03 1 2.5584 2.9484 0 150810000 42006000 108800000 2570 1391 946 975 4017;4018 4018 APFHQLR 7 0 1 Unmodified _APFHQLR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.7429 2 434.743037 867.471521 90818.77 0.55476 0.00024118 -0.75904 -0.00032999 -0.20428 -8.881E-05 434.742792109905 439.746779009616 22.397 0.74827 22.397 22.217 22.965 -1.9073E-06 109 32 7 0 0 0 0.026837 2 8453 80.377 67.993 1 3.4505 3.9302 0 131960000 30912000 101050000 2571 1391 946 975 4019;4020 4020 APGAEEDDSELQR 13 0 1 Unmodified _APGAEEDDSELQR_ 0 0 0 Q53F19;K7ELP6 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.8146 2 708.81551 1415.61647 NaN NaN NaN 0.18888 0.00013388 NaN NaN NaN NaN 25.208 0.22204 25.208 25.106 25.328 0 0 0 0 0.0024253 1 10887 69.672 35.285 1 NaN NaN 0 4917100 4917100 0 2572 1783 947 976 4021 4021 APGAEEDDSELQR 13 0 1 Unmodified _APGAEEDDSELQR_ 0 0 0 Q53F19;K7ELP6 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.817 2 708.81551 1415.61647 77528.47 0.5584 0.00039581 -0.037426 -2.6528E-05 0.52098 0.00036928 708.815354008023 713.820135876265 28.921 0.30258 28.921 28.757 29.06 -1.9073E-06 51 26 4 0 0 0 0.007902 1 11620 44.543 37.162 1 0.66953 0.59531 0 898110 501360 396750 2573 1783 947 976 4022 4022 APGAEEYAQQDVLK 14 1 0 Unmodified _APGAEEYAQQDVLK_ 0 0 0 B4DFN6;B4DI06;A0A024R1T5;P09543 B4DFN6 B4DFN6 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.8828 2 759.87537 1517.73619 70033.89 0.45129 0.00034293 -0.38385 -0.00029167 0.067447 5.1251E-05 760.375876009108 763.882263987216 59.121 0.49835 59.121 58.828 59.327 0 109 39 4 0 0 0 5.5505E-05 2 33646 92.247 80.084 1 1.5282 1.5761 0 10912000 5029300 5882500 2574 88 948 977 4023;4024 4023 APGAEEYAQQDVLK 14 1 0 Unmodified _APGAEEYAQQDVLK_ 0 0 0 B4DFN6;B4DI06;A0A024R1T5;P09543 B4DFN6 B4DFN6 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.8759 2 759.87537 1517.73619 70288.69 0.57134 0.00043415 -0.19397 -0.00014739 0.37737 0.00028676 760.37544577957 763.882126582502 58.189 0.41259 58.189 57.875 58.288 0 101 32 5 0 0 0 0.00091832 1 33689 57.401 49.514 1 1.3898 1.4491 0 11013000 5285100 5728200 2575 88 948 977 4025 4025 APGAGLGQDR 10 0 1 Unmodified _APGAGLGQDR_ 0 0 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.2436 2 471.243598 940.472643 88862.97 -0.01807 -8.5156E-06 0.061167 2.8824E-05 0.043096 2.0309E-05 471.243705818695 476.24812103833 20.345 0.5924 20.345 19.966 20.559 0 56 21 5 0 0 0 0.0078188 1 6791 56.916 29.786 1 0.63684 0.66004 0 20541000 13487000 7053400 2576 1590 949 978 4026 4026 APGCVLSNPDQK 12 1 0 Unmodified _APGCVLSNPDQK_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.3143 2 643.313894 1284.61324 77887.92 0.5589 0.00035955 -1.5797 -0.0010163 -1.0208 -0.00065671 643.313511165408 647.320551752826 37.475 0.39137 37.475 37.283 37.674 3.8147E-06 113 28 7 0 0 0 0.0098911 1 16905 46.796 42.642 1 0.8034 0.67178 0 1827300 779680 1047600 2577 1091 950 979 4027 4027 APGDSTTSDASLAQK 15 1 0 Unmodified _APGDSTTSDASLAQK_ 0 0 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.8536 2 724.84681 1447.67907 NaN NaN NaN -0.18332 -0.00013288 NaN NaN NaN NaN 25 0.19798 25 24.908 25.106 0 0 0 0 2.6694E-05 1 10673 87.719 67.416 1 NaN NaN 0 3014900 0 3014900 2578 1879 951 980 4028 4028 APGEQTVPALNLQNAFR 17 0 1 Unmodified _APGEQTVPALNLQNAFR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 913.4828 2 913.481399 1824.94825 62722.49 0.55561 0.00050754 -0.39145 -0.00035758 0.16417 0.00014996 913.983278186036 918.482575561307 107.52 0.75378 107.52 107.15 107.91 0 387 55 9 0 0 0 2.7926E-25 3 66966 144.57 144.57 1 0.83121 0.98344 0 317210000 173410000 143800000 2579 2148 952 981 4029;4030;4031 4030 APGEQTVPALNLQNAFR 17 0 1 Unmodified _APGEQTVPALNLQNAFR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.4857 2 913.481399 1824.94825 NaN NaN NaN -1.623 -0.0014826 NaN NaN NaN NaN 106.95 0.57068 106.95 106.61 107.18 -7.6294E-06 0 0 0 5.2789E-09 3 68321 96.64 80.009 1 NaN NaN 0 182600000 0 182600000 2580 2148 952 981 4032;4033;4034 4034 APGEQTVPALNLQNAFR 17 0 1 Unmodified _APGEQTVPALNLQNAFR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.4817 2 913.481399 1824.94825 NaN NaN NaN 0.41666 0.00038061 NaN NaN NaN NaN 106.95 0.69374 106.95 106.66 107.35 7.6294E-06 0 0 0 3.087E-26 1 68210 131.17 112.55 1 NaN NaN 0 222360000 222360000 0 2581 2148 952 981 4035 4035 APGEQTVPALNLQNAFR 17 0 1 Unmodified _APGEQTVPALNLQNAFR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 913.4817 2 913.481399 1824.94825 63716.95 0.72201 0.00065954 0.25358 0.00023165 0.9756 0.00089119 913.481637312712 918.485883753981 119.03 0.67691 119.03 118.68 119.36 0 216 33 10 0 0 0 3.5667E-25 2 70319 142.91 142.91 1 0.946 0.82027 0 178290000 91044000 87241000 2582 2148 952 981 4036;4037 4037 APGEQTVPALNLQNAFR 17 0 1 Unmodified _APGEQTVPALNLQNAFR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 913.9837 2 913.481399 1824.94825 63139.23 0.73173 0.00066842 0.24661 0.00022528 0.97834 0.0008937 913.481482486301 918.485972620204 118.76 1.02 118.76 118.18 119.2 0 287 46 12 0 0 0 1.672E-05 2 69242 84.365 84.365 1 1.0828 0.94574 0 199080000 98184000 100890000 2583 2148 952 981 4038;4039 4038 APGLGAFR 8 0 1 Unmodified _APGLGAFR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 394.7244 2 394.724313 787.434072 95717.79 0.037329 1.4735E-05 0.3598 0.00014202 0.39712 0.00015675 394.724414523461 399.728463988717 52.063 0.6993 52.063 51.751 52.45 0 219 54 6 0 0 0 0.0016715 2 28891 106.85 73.488 1 0.71273 0.7943 0 83231000 47443000 35787000 2584 1665 953 982 4040;4041 4041 APGLGAFR 8 0 1 Unmodified _APGLGAFR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 394.7242 2 394.724313 787.434072 98967.58 0.34275 0.00013529 -0.0032278 -1.2741E-06 0.33952 0.00013402 394.72427671708 399.728351529698 50.69 0.53587 50.69 50.49 51.025 -3.8147E-06 172 44 6 0 0 0 0.0010378 2 28704 113.08 86.742 1 0.78156 0.90153 0 71716000 38218000 33498000 2585 1665 953 982 4042;4043 4043 APGLGAFR 8 0 1 Unmodified _APGLGAFR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 394.7244 2 394.724313 787.434072 94370.79 -0.029008 -1.145E-05 0.11811 4.6622E-05 0.089106 3.5172E-05 394.724256125018 399.728436963677 59.721 0.59589 59.721 59.459 60.055 3.8147E-06 155 42 5 0 0 0 0.047328 1 29783 44.721 32.337 1 0.40822 0.33877 0 5788300 4076600 1711800 2586 1665 953 982 4044 4044 APGSGLALLPLK 12 1 0 Unmodified _APGSGLALLPLK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.8635 2 568.855524 1135.69649 82032.88 0.70144 0.00039902 0.15427 8.7755E-05 0.85571 0.00048677 568.855552329146 572.862693577114 106.93 0.59189 106.93 106.64 107.24 0 186 44 6 0 0 0 0.00010028 2 66544 95.775 71.745 1 2.0584 2.1278 0 17201000 6562800 10638000 2587 397;1622 954 983 4045;4046 4046 APGSGLALLPLK 12 1 0 Unmodified _APGSGLALLPLK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.8625 2 568.855524 1135.69649 NaN NaN NaN 0.093564 5.3224E-05 NaN NaN NaN NaN 106.17 0.55719 106.17 105.93 106.48 0 0 0 0 1.4265E-28 2 67470 151.83 114.63 1 NaN NaN 0 15114000 0 15114000 2588 397;1622 954 983 4047;4048 4048 APGSGLALLPLK 12 1 0 Unmodified _APGSGLALLPLK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.8631 2 568.855524 1135.69649 82587.01 0.57626 0.00032781 0.1201 6.8321E-05 0.69636 0.00039613 568.855463686542 572.862757957566 118.29 0.37827 118.29 118.07 118.45 -7.6294E-06 60 16 5 0 0 0 0.0042139 1 68883 54.066 39.399 1 2.0293 1.6173 0 1983200 820310 1162900 2589 397;1622 954 983 4049 4049 APGTNVAMASNQAVR 15 0 1 Oxidation (M) _APGTNVAM(ox)ASNQAVR_ APGTNVAM(1)ASNQAVR APGTNVAM(71.18)ASNQAVR 0 1 0 P49792;Q13073 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.8765 2 751.872639 1501.73072 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.638 1 28.638 28.138 29.138 0 0 0 0 0.00069651 1 13586 71.176 46.321 1 2590 1588 955 984 4050 4050 1369 APIDTSDVEEK 11 1 0 Unmodified _APIDTSDVEEK_ 0 0 0 B4DXG8;A5PLM5;Q06265;D6RIY6 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.2911 2 602.290608 1202.56666 79240.95 0.52313 0.00031508 -0.041258 -2.485E-05 0.48187 0.00029023 602.290573503333 606.297867068329 34.341 0.59565 34.341 33.995 34.591 0 180 50 5 0 0 0 0.00029522 2 17185 88.681 79.342 1 0.92884 0.95907 0 14648000 6631500 8016400 2591 675 956 985 4051;4052 4051 APIDTSDVEEK 11 1 0 Unmodified _APIDTSDVEEK_ 0 0 0 B4DXG8;A5PLM5;Q06265;D6RIY6 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.2982 2 602.290608 1202.56666 78327.2 0.52579 0.00031668 -0.30852 -0.00018582 0.21727 0.00013086 602.290614366625 606.29785382488 33.654 0.50729 33.654 33.386 33.893 -3.8147E-06 148 40 5 0 0 0 1.2129E-12 2 16880 145.25 145.25 1 1.0398 1.0576 0 30357000 14351000 16006000 2592 675 956 985 4053;4054 4053 APIDTSDVEEK 11 1 0 Unmodified _APIDTSDVEEK_ 0 0 0 B4DXG8;A5PLM5;Q06265;D6RIY6 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.2982 2 602.290608 1202.56666 78286.51 0.32185 0.00019385 -0.12539 -7.5523E-05 0.19646 0.00011832 602.290687996581 606.297816965614 39.247 0.56693 39.247 39.029 39.596 0 201 45 6 0 0 0 0.019169 2 17833 44.425 34.138 1 0.99884 0.78856 0 6005300 3093500 2911800 2593 675 956 985 4055;4056 4055 APIDTSDVEEK 11 1 0 Unmodified _APIDTSDVEEK_ 0 0 0 B4DXG8;A5PLM5;Q06265;D6RIY6 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 606.2974 2 602.290608 1202.56666 77626.27 0.33651 0.00020268 -0.30713 -0.00018498 0.029379 1.7694E-05 602.290751670343 606.297570469067 39.467 0.70603 39.467 39.052 39.758 0 196 54 6 0 0 0 0.019169 2 17494 44.425 40.715 1 1.0329 0.84774 0 5186700 2390700 2796000 2594 675 956 985 4057;4058 4058 APIIAVTR 8 0 1 Unmodified _APIIAVTR_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;Q8WUW7;Q504U3;H3BR70 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.773 2 420.76872 839.522887 94855.34 -0.055243 -2.3245E-05 0.75253 0.00031664 0.69729 0.0002934 420.768741458689 425.773206082763 52.724 0.54154 52.724 52.41 52.951 0 202 38 7 0 0 0 0.013893 1 29228 64.265 19.543 1 2.4619 2.8406 0 154840000 44143000 110690000 2595 1481 957 986 4059 4059 APIIAVTR 8 0 1 Unmodified _APIIAVTR_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;Q8WUW7;Q504U3;H3BR70 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7727 2 420.76872 839.522887 94133.09 0.13903 5.8501E-05 1.0424 0.00043861 1.1814 0.00049711 420.76875047976 425.773321259979 51.256 0.56583 51.256 51.044 51.61 -3.8147E-06 191 43 7 0 0 0 0.0074903 1 28985 82.716 34.601 1 2.6713 3.0421 0 130980000 32921000 98056000 2596 1481 957 986 4060 4060 APILIATDVASR 12 0 1 Unmodified _APILIATDVASR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;Q59F66;Q92841;B4DZQ7;A0A0U1RQJ0 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.8634 2 613.858795 1225.70304 77029.12 0.80235 0.00049253 -0.055806 -3.4257E-05 0.74654 0.00045827 613.858650947703 618.862806769269 84.021 0.81242 84.021 83.648 84.46 0 370 64 8 0 0 0 1.7582E-05 2 50183 104.52 86.211 1 1.3868 1.6264 0 217460000 84472000 132980000 2597 1009;1801 958 987 4061;4062 4061 APILIATDVASR 12 0 1 Unmodified _APILIATDVASR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;Q59F66;Q92841;B4DZQ7;A0A0U1RQJ0 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.8622 2 613.858795 1225.70304 77202.95 0.35135 0.00021568 0.49268 0.00030244 0.84403 0.00051812 613.858852592409 618.863192055847 83.086 0.71442 83.086 82.611 83.325 7.6294E-06 331 55 8 0 0 0 0.000197 2 50654 90.108 75.614 1 1.4115 1.6178 0 174570000 77553000 97020000 2598 1009;1801 958 987 4063;4064 4063 APILIATDVASR 12 0 1 Unmodified _APILIATDVASR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;Q59F66;Q92841;B4DZQ7;A0A0U1RQJ0 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8632 2 613.858795 1225.70304 76693.06 0.62013 0.00038067 0.39832 0.00024451 1.0185 0.00062519 613.859731383506 618.862714312171 95.766 1.0919 95.766 95.232 96.324 0 338 73 8 0 0 0 0.00021532 2 53576 81.865 63.553 1 0.95003 0.79527 0 24723000 12557000 12166000 2599 1009;1801 958 987 4065;4066 4065 APILIATDVASR 12 0 1 Unmodified _APILIATDVASR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;Q59F66;Q92841;B4DZQ7;A0A0U1RQJ0 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.8633 2 613.858795 1225.70304 77203.13 0.35775 0.00021961 0.010055 6.1721E-06 0.36781 0.00022578 613.858717997827 618.862806111359 95.616 0.71262 95.616 95.292 96.004 0 270 48 8 0 0 0 4.62E-05 1 52675 98.943 80.163 1 0.97777 0.83228 0 19486000 10037000 9448800 2600 1009;1801 958 987 4067 4067 APIRPDIVNFVHTNLR 16 0 2 Unmodified _APIRPDIVNFVHTNLR_ 0 0 1 P36578;Q59GY2;B4DMJ6;B4DFI6;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.2696 4 466.265339 1861.03225 86393.37 0.36871 0.00017191 -0.058745 -2.7391E-05 0.30996 0.00014452 466.516022898591 471.269476622548 94.431 2.2301 94.431 93.467 95.697 0 1001 193 7 0 0 0 4.4695E-09 5 57246 103.13 103.13 1 0.85578 0.93494 0 235820000 136220000 99599000 2601 1548 959 988 4068;4069;4070;4071;4072 4069 APIRPDIVNFVHTNLR 16 0 2 Unmodified _APIRPDIVNFVHTNLR_ 0 0 1 P36578;Q59GY2;B4DMJ6;B4DFI6;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.3504 3 621.35136 1861.03225 77103.02 0.65206 0.00040516 -0.38577 -0.0002397 0.26629 0.00016546 621.685443939027 628.357654538092 94.607 0.88929 94.607 94.358 95.248 -7.6294E-06 204 78 5 0 0 0 0.00089933 1 57466 50.653 50.653 1 1.0401 1.1248 0 21264000 9193300 12071000 2602 1548 959 988 4073 4073 APIRPDIVNFVHTNLR 16 0 2 Unmodified _APIRPDIVNFVHTNLR_ 0 0 1 P36578;Q59GY2;B4DMJ6;B4DFI6;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.5203 4 466.265339 1861.03225 86559.05 0.45411 0.00021174 0.24242 0.00011303 0.69653 0.00032477 466.51605295139 471.270002878022 92.303 1.878 92.303 91.314 93.192 0 965 161 9 0 0 0 3.3932E-05 5 57237 77.191 77.191 1 0.92357 1.0962 0 197430000 121170000 76258000 2603 1548 959 988 4074;4075;4076;4077;4078 4077 APIRPDIVNFVHTNLR 16 0 2 Unmodified _APIRPDIVNFVHTNLR_ 0 0 1 P36578;Q59GY2;B4DMJ6;B4DFI6;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.2702 4 466.265339 1861.03225 85726.94 0.30969 0.0001444 -0.18389 -8.5741E-05 0.12581 5.8659E-05 466.515975008851 471.269419991393 104.49 1.0628 104.49 104.09 105.15 0 410 65 11 0 0 0 0.029909 2 59377 18.76 18.76 1 1.0017 0.8032 0 73741000 36506000 37235000 2604 1548 959 988 4079;4080 4079 APIRPDIVNFVHTNLR 16 0 2 Unmodified _APIRPDIVNFVHTNLR_ 0 0 1 P36578;Q59GY2;B4DMJ6;B4DFI6;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.3592 3 621.35136 1861.03225 75962.28 0.57188 0.00035534 0.026504 1.6468E-05 0.59838 0.0003718 621.35129616325 628.023532463 104.48 0.74049 104.48 104.25 104.99 0 262 44 10 0 0 0 0.00012135 2 59452 56.959 56.959 1 1.0627 0.882 0 19648000 9479000 10169000 2605 1548 959 988 4081;4082 4082 APIRPDIVNFVHTNLR 16 0 2 Unmodified _APIRPDIVNFVHTNLR_ 0 0 1 P36578;Q59GY2;B4DMJ6;B4DFI6;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.2698 4 466.265339 1861.03225 86041.54 0.11807 5.505E-05 0.0054807 2.5554E-06 0.12355 5.7606E-05 466.516077006764 471.26946475315 104.02 0.98915 104.02 103.77 104.76 7.6294E-06 437 61 11 0 0 0 0.010762 2 58230 23.527 23.527 1 1.0127 0.95527 0 71518000 31750000 39768000 2606 1548 959 988 4083;4084 4083 APIRPDIVNFVHTNLR 16 0 2 Unmodified _APIRPDIVNFVHTNLR_ 0 0 1 P36578;Q59GY2;B4DMJ6;B4DFI6;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.0193 3 621.35136 1861.03225 75374.34 0.386 0.00023984 0.13766 8.5535E-05 0.52365 0.00032537 621.351467994592 628.023620876144 104.02 0.65821 104.02 103.77 104.43 0 266 43 9 0 0 0 7.1168E-05 2 58257 56.407 56.407 1 0.98682 0.91023 0 16616000 8409400 8206700 2607 1548 959 988 4085;4086 4085 APIRPDIVNFVHTNLRK 17 1 2 Unmodified _APIRPDIVNFVHTNLRK_ 0 0 2 P36578;Q59GY2;B4DMJ6;B4DFI6;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.2971 4 498.28908 1989.12721 84404.98 0.43627 0.00021739 -0.063186 -3.1485E-05 0.37308 0.0001859 498.289042206673 505.296756432144 90.649 0.93403 90.649 90.412 91.346 7.6294E-06 306 55 8 0 0 0 0.048929 1 50164 18.784 18.784 1 0.99266 0.92587 0 15227000 7887900 7339200 2608 1548 960 989 4087 4087 APIRPDIVNFVHTNLRK 17 1 2 Unmodified _APIRPDIVNFVHTNLRK_ 0 0 2 P36578;Q59GY2;B4DMJ6;B4DFI6;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.2971 4 498.28908 1989.12721 85246.22 0.043016 2.1434E-05 0.17342 8.6414E-05 0.21644 0.00010785 498.289118876691 505.296862257497 90.036 0.94288 90.036 89.844 90.787 0 302 59 8 0 0 0 0.044026 1 48963 13.655 10.107 1 1.0184 1.0121 0 10760000 3902300 6857900 2609 1548 960 989 4088 4088 APIVTVGVNNDPADVR 16 0 1 Unmodified _APIVTVGVNNDPADVR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.9401 2 818.936293 1635.85803 67071.25 0.77352 0.00063347 0.022089 1.809E-05 0.79561 0.00065156 818.936316817346 823.940423980948 79.073 0.90449 79.073 78.521 79.426 0 529 81 10 0 0 0 2.6372E-12 5 46665 120.03 120.03 1 0.83679 0.99126 0 445040000 236800000 208240000 2610 1995;1289 961 990 4089;4090;4091;4092;4093 4091 APIVTVGVNNDPADVR 16 0 1 Unmodified _APIVTVGVNNDPADVR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.9398 2 818.936293 1635.85803 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.428 1 79.428 78.928 79.928 7.6294E-06 0 0 0 0.04921 1 47112 38.58 21.554 1 2611 1995;1289 961 990 4094 4094 APIVTVGVNNDPADVR 16 0 1 Unmodified _APIVTVGVNNDPADVR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.9416 2 818.936293 1635.85803 66740.97 0.67972 0.00055665 0.035313 2.8919E-05 0.71503 0.00058557 818.936352366896 823.940430505206 78.008 0.7847 78.008 77.605 78.39 0 458 66 10 0 0 0 1.4806E-33 2 47111 151.55 139.05 1 0.83245 0.96585 0 325400000 174610000 150790000 2612 1995;1289 961 990 4095;4096 4096 APIVTVGVNNDPADVR 16 0 1 Unmodified _APIVTVGVNNDPADVR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 823.9417 2 818.936293 1635.85803 67207.53 0.6816 0.00055819 0.072919 5.9716E-05 0.75452 0.00061791 818.936438824232 823.940457183371 90.367 1.0126 90.367 90.001 91.014 -7.6294E-06 476 66 10 0 0 0 5.2182E-09 2 49882 109.72 99.111 1 1.5692 1.355 0 91510000 35311000 56199000 2613 1995;1289 961 990 4097;4098 4097 APIVTVGVNNDPADVR 16 0 1 Unmodified _APIVTVGVNNDPADVR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.9352 2 818.936293 1635.85803 66651.52 0.56702 0.00046435 -0.029608 -2.4247E-05 0.53741 0.00044011 818.936336600791 823.940402802081 90.272 1.0726 90.272 89.914 90.987 0 468 66 10 0 0 0 0.0032712 4 49001 37.327 37.327 1 1.5701 1.3704 0 87108000 33498000 53609000 2614 1995;1289 961 990 4099;4100;4101;4102 4100 APLAVTSQVINCR 13 0 1 Unmodified _APLAVTSQVINCR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.8858 2 714.885018 1427.75548 72331.36 0.69952 0.00050008 -0.055792 -3.9885E-05 0.64373 0.00046019 714.885104169467 719.888817290603 74.154 0.4933 74.154 73.949 74.442 0 170 41 5 0 0 0 4.5805E-09 2 43441 120.63 120.63 1 0.895 0.93085 0 20999000 12027000 8971100 2615 1565 962 991 4103;4104 4104 APLAVTSQVINCR 13 0 1 Unmodified _APLAVTSQVINCR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.8857 2 714.885018 1427.75548 72779.47 0.91667 0.00065531 -0.26906 -0.00019235 0.64761 0.00046297 714.884876003387 719.888775022721 72.992 0.54261 72.992 72.764 73.307 0 195 43 6 0 0 0 8.3339E-19 2 43778 143.4 143.4 1 0.88844 0.96734 0 29080000 17640000 11440000 2616 1565 962 991 4105;4106 4106 APLAVTSQVINCR 13 0 1 Unmodified _APLAVTSQVINCR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.8848 2 714.885018 1427.75548 71830.18 0.65063 0.00046512 -0.22756 -0.00016268 0.42307 0.00030245 714.884990131553 719.889011835588 84.741 0.55464 84.741 84.419 84.974 -7.6294E-06 206 40 7 0 0 0 5.1087E-09 2 46209 120.09 120.09 1 1.7733 1.5245 0 7779500 2973400 4806200 2617 1565 962 991 4107;4108 4108 APLAVTSQVINCR 13 0 1 Unmodified _APLAVTSQVINCR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.8863 2 714.885018 1427.75548 71647.15 0.75641 0.00054075 -0.054942 -3.9277E-05 0.70147 0.00050147 714.885182417118 719.889140244671 84.861 0.64409 84.861 84.535 85.179 0 217 45 7 0 0 0 0.00014626 1 45471 83.499 76.611 1 1.8308 1.5118 0 8182500 3144200 5038300 2618 1565 962 991 4109 4109 APLNIPGTPVLEDFPQNDDEK 21 1 0 Unmodified _APLNIPGTPVLEDFPQNDDEK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1155.5681 2 1155.06843 2308.12231 56678.07 0.52125 0.00060208 -0.18929 -0.00021864 0.33196 0.00038343 1155.56962888379 1159.5766449471 115.78 0.61658 115.78 115.49 116.1 7.6294E-06 353 39 12 0 0 0 1.8175E-11 2 73620 97.273 97.273 1 0.88393 1.0161 0 203660000 112860000 90803000 2619 740 963 992 4110;4111 4111 APLNIPGTPVLEDFPQNDDEK 21 1 0 Unmodified _APLNIPGTPVLEDFPQNDDEK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1156.0697 2 1155.06843 2308.12231 56570 0.19688 0.00022741 0.18014 0.00020807 0.37701 0.00043548 1155.5700813408 1159.57711422551 115.31 0.60725 115.31 115.01 115.62 0 329 39 12 0 0 0 9.8516E-05 3 75027 38.189 38.189 1 0.88441 1.0307 0 253000000 130490000 122510000 2620 740 963 992 4112;4113;4114 4113 APLNIPGTPVLEDFPQNDDEK 21 1 0 Unmodified _APLNIPGTPVLEDFPQNDDEK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1159.5784 2 1155.06843 2308.12231 56066.35 -0.01989 -2.2974E-05 0.35672 0.00041204 0.33683 0.00038906 1155.57045470081 1159.5772500921 127.31 1.1225 127.31 126.94 128.06 7.6294E-06 371 45 13 0 0 0 1.9685E-06 1 76561 49.482 49.482 1 1.7432 1.5166 0 147070000 52377000 94694000 2621 740 963 992 4115 4115 APLNIPGTPVLEDFPQNDDEK 21 1 0 Unmodified _APLNIPGTPVLEDFPQNDDEK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1159.5779 2 1155.06843 2308.12231 56322.07 0.20096 0.00023212 -0.004183 -4.8316E-06 0.19677 0.00022729 1155.5700647028 1159.57685879984 127.14 0.99043 127.14 126.85 127.84 0 346 41 12 0 0 0 2.9322E-09 2 75577 86.214 86.214 1 1.7092 1.4636 0 122700000 43432000 79269000 2622 740 963 992 4116;4117 4116 APLPDLYPFGTMR 13 0 1 Oxidation (M) _APLPDLYPFGTM(ox)R_ APLPDLYPFGTM(1)R APLPDLYPFGTM(43.3)R 0 1 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.379 2 747.376494 1492.73844 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.84 1 109.84 109.34 110.34 0 0 0 0 0.0163 1 68851 43.297 27.099 1 2623 1801 964 993 4118 4118 1665 APLPDLYPFGTMR 13 0 1 Oxidation (M) _APLPDLYPFGTM(ox)R_ APLPDLYPFGTM(1)R APLPDLYPFGTM(43.3)R 0 1 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.3793 2 747.376494 1492.73844 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.19 1 109.19 108.69 109.69 0 0 0 0 0.0163 1 70034 43.297 27.406 1 2624 1801 964 993 4119 4119 1665 APLQQCAEDR 10 0 1 Unmodified _APLQQCAEDR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.2775 2 594.277312 1186.54007 77778.81 0.47401 0.00028169 -0.38711 -0.00023005 0.086898 5.1641E-05 594.277291255323 599.281335313296 20.686 0.69574 20.686 20.471 21.166 0 85 31 6 0 0 0 3.2478E-65 1 7128 219.7 179.7 1 0.72336 0.81724 0 102020000 58339000 43682000 2625 740 965 994 4120 4120 APLQQCAEDR 10 0 1 Unmodified _APLQQCAEDR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.2773 2 594.277312 1186.54007 79704.79 0.7738 0.00045985 -0.28541 -0.00016961 0.48839 0.00029024 594.276906889714 599.281287996324 20.555 0.46613 20.555 20.324 20.791 0 47 14 6 0 0 0 2.9626E-22 1 6891 166.19 144.72 1 0.46926 0.5372 0 85597000 48009000 37588000 2626 740 965 994 4121 4121 APNTPASGANGDGSMSQTQSGSTVK 25 1 0 Oxidation (M) _APNTPASGANGDGSM(ox)SQTQSGSTVK_ APNTPASGANGDGSM(1)SQTQSGSTVK APNTPASGANGDGSM(52.9)SQTQSGSTVK 0 1 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.6902 3 789.355675 2365.0452 NaN NaN NaN -2.616 -0.0020649 NaN NaN NaN NaN 15.027 0.31727 15.027 14.901 15.218 9.5367E-07 0 0 0 6.0311E-06 1 2793 52.898 43.528 1 NaN NaN 0 6711700 6711700 0 + 2627 1163 966 995 4122 4122 877 APNTPASGANGDGSMSQTQSGSTVK 25 1 0 Oxidation (M) _APNTPASGANGDGSM(ox)SQTQSGSTVK_ APNTPASGANGDGSM(1)SQTQSGSTVK APNTPASGANGDGSM(57.73)SQTQSGSTVK 0 1 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.6902 3 789.355675 2365.0452 NaN NaN NaN -0.56743 -0.0004479 NaN NaN NaN NaN 15.83 0.88405 15.83 15.458 16.342 0 0 0 0 1.1618E-08 1 3331 57.735 54.544 1 NaN NaN 0 7708200 7708200 0 + 2628 1163 966 995 4123 4123 877 APNTPASGANGDGSMSQTQSGSTVK 25 1 0 Oxidation (M) _APNTPASGANGDGSM(ox)SQTQSGSTVK_ APNTPASGANGDGSM(1)SQTQSGSTVK APNTPASGANGDGSM(326.94)SQTQSGSTVK 0 1 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1184.0308 2 1183.52987 2365.0452 NaN NaN NaN -0.040326 -4.7727E-05 NaN NaN NaN NaN 19.953 0.92372 19.953 19.736 20.66 0 0 0 0 0 1 6377 326.94 305.69 1 NaN NaN 0 729490000 729490000 0 + 2629 1163 966 995 4124 4124 877 APNTPASGANGDGSMSQTQSGSTVK 25 1 0 Oxidation (M) _APNTPASGANGDGSM(ox)SQTQSGSTVK_ APNTPASGANGDGSM(1)SQTQSGSTVK APNTPASGANGDGSM(159.53)SQTQSGSTVK 0 1 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.3573 3 789.355675 2365.0452 NaN NaN NaN 0.0061554 4.8588E-06 NaN NaN NaN NaN 19.953 0.51537 19.953 19.807 20.322 0 0 0 0 1.2188E-70 1 6400 159.53 147.4 1 NaN NaN 0 42068000 42068000 0 + 2630 1163 966 995 4125 4125 877 APNTPASGANGDGSMSQTQSGSTVK 25 1 0 Oxidation (M) _APNTPASGANGDGSM(ox)SQTQSGSTVK_ APNTPASGANGDGSM(1)SQTQSGSTVK APNTPASGANGDGSM(332.29)SQTQSGSTVK 0 1 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1183.5287 2 1183.52987 2365.0452 NaN NaN NaN -0.68009 -0.00080491 NaN NaN NaN NaN 19.951 1.1399 19.951 19.689 20.829 1.9073E-06 0 0 0 0 1 6174 332.29 314.66 1 NaN NaN 0 1315000000 1315000000 0 + 2631 1163 966 995 4126 4126 877 APNTPASGANGDGSMSQTQSGSTVK 25 1 0 Oxidation (M) _APNTPASGANGDGSM(ox)SQTQSGSTVK_ APNTPASGANGDGSM(1)SQTQSGSTVK APNTPASGANGDGSM(55.06)SQTQSGSTVK 0 1 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.3577 3 789.355675 2365.0452 NaN NaN NaN -0.20079 -0.00015849 NaN NaN NaN NaN 19.953 0.51992 19.953 19.76 20.28 0 0 0 0 3.0048E-07 1 6219 55.061 45.965 1 NaN NaN 0 29098000 29098000 0 + 2632 1163 966 995 4127 4127 877 APNTPASGANGDGSMSQTQSGSTVK 25 1 0 Oxidation (M) _APNTPASGANGDGSM(ox)SQTQSGSTVK_ APNTPASGANGDGSM(1)SQTQSGSTVK APNTPASGANGDGSM(45.62)SQTQSGSTVK 0 1 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1183.5314 2 1183.52987 2365.0452 NaN NaN NaN 0.19222 0.00022749 NaN NaN NaN NaN 27.144 0.43302 27.144 26.926 27.359 0 0 0 0 6.6486E-06 1 12385 45.618 38.247 1 NaN NaN 0 9627900 9627900 0 + 2633 1163 966 995 4128 4128 877 APNTPASGANGDGSMSQTQSGSTVK 25 1 0 Oxidation (M) _APNTPASGANGDGSM(ox)SQTQSGSTVK_ APNTPASGANGDGSM(1)SQTQSGSTVK APNTPASGANGDGSM(194.27)SQTQSGSTVK 0 1 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1184.0314 2 1183.52987 2365.0452 NaN NaN NaN -0.26875 -0.00031808 NaN NaN NaN NaN 21.964 1.3575 21.964 21.591 22.948 1.9073E-06 0 0 0 7.9118E-116 1 6781 194.27 182.69 1 NaN NaN 0 167750000 167750000 0 + 2634 1163 966 995 4129 4129 877 APNTPASGANGDGSMSQTQSGSTVK 25 1 0 Unmodified _APNTPASGANGDGSMSQTQSGSTVK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1175.5328 2 1175.53242 2349.05028 NaN NaN NaN -0.21921 -0.00025769 NaN NaN NaN NaN 27.676 0.57176 27.676 27.418 27.99 0 0 0 0 2.7847E-05 1 12708 42.708 40.942 1 NaN NaN 0 67312000 67312000 0 + 2635 1163 966 996 4130 4130 APNTPASGANGDGSMSQTQSGSTVK 25 1 0 Unmodified _APNTPASGANGDGSMSQTQSGSTVK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1176.0323 2 1175.53242 2349.05028 NaN NaN NaN 0.15622 0.00018364 NaN NaN NaN NaN 27.121 0.66325 27.121 26.842 27.505 0 0 0 0 8.0129E-176 1 12351 233.57 228.03 1 NaN NaN 0 61873000 61873000 0 + 2636 1163 966 996 4131 4131 APNTPASGANGDGSMSQTQSGSTVK 25 1 0 Unmodified _APNTPASGANGDGSMSQTQSGSTVK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1176.0347 2 1175.53242 2349.05028 NaN NaN NaN -0.25966 -0.00030524 NaN NaN NaN NaN 32.726 1.0683 32.726 32.181 33.25 0 0 0 0 3.0134E-09 1 13934 64.705 64.705 1 NaN NaN 0 88568000 88568000 0 + 2637 1163 966 996 4132 4132 APNTPDILEIEFK 13 1 0 Unmodified _APNTPDILEIEFK_ 0 0 0 Q5T6L4;P00966;A8KAP9;B4E395 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.8997 2 743.893032 1485.77151 NaN NaN NaN -0.1792 -0.0001333 NaN NaN NaN NaN 112.5 0.5603 112.5 112.24 112.8 0 0 0 0 7.9605E-09 1 70901 107.85 88.085 1 NaN NaN 0 18408000 0 18408000 2638 1437 967 997 4133 4133 APNTPDILEIEFK 13 1 0 Unmodified _APNTPDILEIEFK_ 0 0 0 Q5T6L4;P00966;A8KAP9;B4E395 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.8939 2 743.893032 1485.77151 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.49 1 112.49 111.99 112.99 0 0 0 0 0.013768 1 71038 54.343 43.586 1 2639 1437 967 997 4134 4134 APNTPDILEIEFK 13 1 0 Unmodified _APNTPDILEIEFK_ 0 0 0 Q5T6L4;P00966;A8KAP9;B4E395 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.9005 2 743.893032 1485.77151 NaN NaN NaN 0.070974 5.2797E-05 NaN NaN NaN NaN 111.92 0.53048 111.92 111.64 112.17 0 0 0 0 3.2229E-14 1 72203 126.71 111.74 1 NaN NaN 0 19141000 0 19141000 2640 1437 967 997 4135 4135 APNTPDILEIEFK 13 1 0 Unmodified _APNTPDILEIEFK_ 0 0 0 Q5T6L4;P00966;A8KAP9;B4E395 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.9008 2 743.893032 1485.77151 72292.4 0.98144 0.00073009 -0.26078 -0.00019399 0.72067 0.0005361 744.393100666195 747.900395385108 123.84 0.46049 123.84 123.56 124.02 0 60 19 5 0 0 0 0.00013837 1 74077 81.525 81.525 1 2.0269 1.7053 0 2141900 656230 1485600 2641 1437 967 997 4136 4136 APNTPDILEIEFKK 14 2 0 Unmodified _APNTPDILEIEFKK_ 0 0 1 Q5T6L4;P00966;A8KAP9;B4E395 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.3061 3 538.962768 1613.86647 NaN NaN NaN 1.0392 0.0005601 NaN NaN NaN NaN 93.193 0.53546 93.193 92.945 93.48 7.6294E-06 0 0 0 9.4773E-05 1 57810 80.102 68.628 1 NaN NaN 0 12834000 0 12834000 2642 1437 968 998 4137 4137 APPPGLPAETIK 12 1 0 Unmodified _APPPGLPAETIK_ 0 0 0 F8VZZ0;F8VZ51;Q6LC83;A0A024RBB6;P11802;F8VXD2;F8VYH9;F8VTV8;F8VWX7 F8VZZ0 F8VZZ0 CDK4 Cyclin-dependent kinase 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8487 2 595.842613 1189.67067 NaN NaN NaN -0.11901 -7.091E-05 NaN NaN NaN NaN 64.384 0.55891 64.384 64.164 64.723 0 0 0 0 0.013122 1 37874 53.756 23.571 1 NaN NaN 0 4996800 0 4996800 2643 331 969 999 4138 4138 APPTACYAGAAPAPSQVK 18 1 0 Unmodified _APPTACYAGAAPAPSQVK_ 0 0 0 P17676;Q99557;Q9BSC0 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.4387 2 878.937979 1755.8614 65324.68 0.38889 0.00034181 -0.12882 -0.00011322 0.26007 0.00022858 878.937815369557 883.44630333247 52.699 0.42134 52.699 52.45 52.872 0 142 29 7 0 0 0 2.3016E-16 3 29225 140.08 140.08 1 0.74064 0.78932 0 15973000 10616000 5356400 2644 1493 970 1000 4139;4140;4141 4140 APPTACYAGAAPAPSQVK 18 1 0 Unmodified _APPTACYAGAAPAPSQVK_ 0 0 0 P17676;Q99557;Q9BSC0 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.94 2 878.937979 1755.8614 65269.92 0.29378 0.00025821 -0.36967 -0.00032492 -0.075898 -6.6709E-05 878.937616185852 882.944781102858 51.732 0.46523 51.732 51.458 51.923 3.8147E-06 155 38 6 0 0 0 1.4474E-11 3 29270 117.93 117.93 1 0.89802 0.91189 0 26329000 16220000 10109000 2645 1493 970 1000 4142;4143;4144 4143 APPTACYAGAAPAPSQVK 18 1 0 Unmodified _APPTACYAGAAPAPSQVK_ 0 0 0 P17676;Q99557;Q9BSC0 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 879.4407 2 878.937979 1755.8614 64412.93 0.45782 0.0004024 0.26986 0.00023719 0.72768 0.00063959 878.938059788046 882.945285102644 61.577 0.57415 61.577 61.339 61.913 3.8147E-06 284 46 9 0 0 0 0.00035582 2 31494 54.007 54.007 1 1.6164 1.2777 0 10589000 4761700 5827000 2646 1493 970 1000 4145;4146 4146 APPTACYAGAAPAPSQVK 18 1 0 Unmodified _APPTACYAGAAPAPSQVK_ 0 0 0 P17676;Q99557;Q9BSC0 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 879.4399 2 878.937979 1755.8614 64668.95 0.07815 6.8689E-05 0.45378 0.00039885 0.53193 0.00046754 879.440026824162 882.945384410995 62.212 0.60134 62.212 61.979 62.58 0 302 45 10 0 0 0 0.00086619 2 31198 54.524 54.524 1 1.6656 1.3717 0 10550000 3609500 6940100 2647 1493 970 1000 4147;4148 4147 APPVDDAEVDELVLQTK 17 1 0 Unmodified _APPVDDAEVDELVLQTK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 923.9828 2 919.972738 1837.93092 NaN NaN NaN 0.14085 0.00012958 NaN NaN NaN NaN 105.3 0.8016 105.3 104.92 105.72 0 0 0 0 6.9018E-05 1 64961 72.496 48.645 1 NaN NaN 0 91847000 0 91847000 2648 2103 971 1001 4149 4149 APPVDDAEVDELVLQTK 17 1 0 Unmodified _APPVDDAEVDELVLQTK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 923.9811 2 919.972738 1837.93092 NaN NaN NaN 0.26799 0.00024655 NaN NaN NaN NaN 104.72 0.7705 104.72 104.37 105.14 0 0 0 0 6.1457E-74 2 66184 184.21 156.73 1 NaN NaN 0 171970000 0 171970000 2649 2103 971 1001 4150;4151 4150 APPVDDAEVDELVLQTK 17 1 0 Unmodified _APPVDDAEVDELVLQTK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 923.9808 2 919.972738 1837.93092 63993.07 0.40652 0.00037399 0.51925 0.0004777 0.92577 0.00085168 920.474402261468 923.980334566366 116.96 0.98973 116.96 116.64 117.63 0 185 41 10 0 0 0 2.4864E-57 2 68711 182.57 182.57 1 37.075 31.803 0 79445000 2468600 76976000 2650 2103 971 1001 4152;4153 4152 APPVDDAEVDELVLQTK 17 1 0 Unmodified _APPVDDAEVDELVLQTK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 923.9815 2 919.972738 1837.93092 62715.13 0.51241 0.0004714 0.46733 0.00042993 0.97974 0.00090133 919.974934096608 923.980231204588 116.8 1.0988 116.8 116.48 117.58 0 197 49 8 0 0 0 3.7713E-13 2 67673 122.97 122.97 1 33.051 28.067 0 71999000 2623300 69375000 2651 2103 971 1001 4154;4155 4154 APQETYADIGGLDNQIQEIK 20 1 0 Unmodified _APQETYADIGGLDNQIQEIK_ 0 0 0 Q53XL8;Q53HB3;P62191;G3V4X1 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1106.5569 2 1102.0475 2202.08044 58450.31 0.21663 0.00023874 0.16726 0.00018433 0.38389 0.00042307 1102.54952859852 1106.05469296347 101.63 0.55748 101.63 101.35 101.91 0 183 42 7 0 0 0 0.0041792 2 62303 43.813 39.265 1 2.4182 2.4579 0 13808000 4846600 8961500 2652 1634 972 1002 4156;4157 4156 APQETYADIGGLDNQIQEIK 20 1 0 Unmodified _APQETYADIGGLDNQIQEIK_ 0 0 0 Q53XL8;Q53HB3;P62191;G3V4X1 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1102.0465 2 1102.0475 2202.08044 58191.89 0.034867 3.8426E-05 0.1724 0.00019 0.20727 0.00022842 1102.04818606903 1106.05536738972 101.02 0.50009 101.02 100.79 101.29 0 177 38 7 0 0 0 3.8228E-10 3 63529 99.566 99.566 1 2.1453 2.1839 0 16942000 5241500 11701000 2653 1634 972 1002 4158;4159;4160 4159 APQETYADIGGLDNQIQEIK 20 1 0 Unmodified _APQETYADIGGLDNQIQEIK_ 0 0 0 Q53XL8;Q53HB3;P62191;G3V4X1 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1106.5574 2 1102.0475 2202.08044 58545.55 0.18338 0.00020209 0.021047 2.3195E-05 0.20442 0.00022529 1102.54928998815 1106.55638131308 113.92 0.49317 113.92 113.72 114.22 0 93 21 8 0 0 0 0.00065735 1 65502 46.89 46.89 1 1.6461 1.3401 0 7269900 2861300 4408600 2654 1634 972 1002 4161 4161 APQMYEFHLPLSPEELLK 18 1 0 Oxidation (M) _APQM(ox)YEFHLPLSPEELLK_ APQM(1)YEFHLPLSPEELLK APQM(48.91)YEFHLPLSPEELLK 0 1 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00;A0PJ76;F5GZK7;F5H431 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.0403 3 720.034486 2157.08163 71547.68 0.90622 0.00065251 -0.29587 -0.00021304 0.61035 0.00043947 720.368757734857 723.040059862714 121.22 0.65081 121.22 120.94 121.59 0 304 43 10 0 0 0 3.2888E-05 1 78169 48.907 48.907 1 0.88559 0.9532 0 33276000 16364000 16912000 2655 908 973 1003 4162 4162 735 APQVLVLAPTR 11 0 1 Unmodified _APQVLVLAPTR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.8629 2 582.858598 1163.70264 79107.95 0.43555 0.00025386 0.37556 0.0002189 0.81111 0.00047276 582.858829716983 587.862873031779 83.414 0.75984 83.414 83.123 83.883 0 402 64 9 0 0 0 4.2578E-06 3 50149 111.06 87.027 1 1.087 1.2869 0 376700000 174180000 202520000 2656 2065 974 1004 4163;4164;4165 4165 APQVLVLAPTR 11 0 1 Unmodified _APQVLVLAPTR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.8585 2 582.858598 1163.70264 79084.05 0.70068 0.0004084 0.0030129 1.7561E-06 0.7037 0.00041016 582.858541428519 587.862686366276 82.356 0.73755 82.356 82.079 82.817 -7.6294E-06 369 63 8 0 0 0 8.5874E-11 2 50311 136.63 97.613 1 1.1302 1.3115 0 329960000 156570000 173390000 2657 2065 974 1004 4166;4167 4167 APQVLVLAPTR 11 0 1 Unmodified _APQVLVLAPTR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.8592 2 582.858598 1163.70264 79061.86 0.67064 0.00039089 0.048967 2.8541E-05 0.71961 0.00041943 582.858623393598 587.862705434251 95.044 1.0305 95.044 94.699 95.729 0 387 74 9 0 0 0 0.00045221 2 53085 77.379 55.915 1 1.1537 0.99293 0 53569000 24238000 29331000 2658 2065 974 1004 4168;4169 4169 APQVLVLAPTR 11 0 1 Unmodified _APQVLVLAPTR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.8586 2 582.858598 1163.70264 78896.27 0.50661 0.00029528 0.20907 0.00012186 0.71568 0.00041714 582.858740885518 587.862788314148 94.866 0.88002 94.866 94.485 95.365 0 345 58 9 0 0 0 0.00035056 3 52141 85.355 60.579 1 1.1439 0.99787 0 45748000 21539000 24209000 2659 2065 974 1004 4170;4171;4172 4171 APQVVAEAAK 10 1 0 Unmodified _APQVVAEAAK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.2793 2 492.279649 982.544745 85191.87 0.19147 9.4258E-05 0.23302 0.00011471 0.42449 0.00020897 492.279600854879 496.286690423148 27.828 0.41277 27.828 27.657 28.07 0 141 27 7 0 0 0 2.4427E-08 2 12963 120.99 104.21 1 0.73886 0.83172 0 121090000 68067000 53021000 2660 1398 975 1005 4173;4174 4174 APQVVAEAAK 10 1 0 Unmodified _APQVVAEAAK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.2867 2 492.279649 982.544745 86215.43 -0.016295 -8.0218E-06 -0.064582 -3.1793E-05 -0.080878 -3.9814E-05 492.279435505155 496.286410629456 27.421 0.63449 27.421 26.905 27.539 -1.9073E-06 99 31 7 0 0 0 3.3269E-10 2 12672 136.57 119.79 1 0.8087 0.91428 0 131650000 71465000 60188000 2661 1398 975 1005 4175;4176 4175 APQVVAEAAK 10 1 0 Unmodified _APQVVAEAAK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.2796 2 492.279649 982.544745 86045.51 0.10104 4.9739E-05 0.045849 2.2571E-05 0.14689 7.231E-05 492.279727338408 496.286263619216 31.184 0.72387 31.184 30.691 31.415 0 148 45 6 0 0 0 0.0099144 2 13102 54.066 48.285 1 0.79389 0.63514 0 7126500 4152000 2974500 2662 1398 975 1005 4177;4178 4178 APQVVAEAAK 10 1 0 Unmodified _APQVVAEAAK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.2796 2 492.279649 982.544745 84987.01 0.12749 6.2759E-05 0.23788 0.00011711 0.36537 0.00017986 492.279633925426 496.286677021498 31.248 0.82529 31.248 30.81 31.635 0 125 42 6 0 0 0 1.2241E-05 2 12652 103.55 88.396 1 0.7896 0.64426 0 6363100 3835000 2528200 2663 1398 975 1005 4179;4180 4180 APSAGSDFAATSGTLTVTNLLEK 23 1 0 Unmodified _APSAGSDFAATSGTLTVTNLLEK_ 0 0 0 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1130.584 2 1126.07625 2250.13796 60104.46 0.14502 0.00016331 -0.17085 -0.00019239 -0.025823 -2.9079E-05 1126.57761888305 1130.58423163667 116.06 0.40456 116.06 115.84 116.24 -7.6294E-06 77 22 6 0 0 0 8.1736E-12 2 73946 89.506 89.506 1 1.2475 1.262 0 10145000 4894100 5251400 2664 1919 976 1006 4181;4182 4182 APSAGSDFAATSGTLTVTNLLEK 23 1 0 Unmodified _APSAGSDFAATSGTLTVTNLLEK_ 0 0 0 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1126.58 2 1126.07625 2250.13796 59779.23 0.40826 0.00045973 0.077255 8.6994E-05 0.48551 0.00054672 1126.07707047545 1130.58458915034 115.48 0.34966 115.48 115.33 115.68 0 88 21 6 0 0 0 7.5337E-10 3 75390 84.759 84.759 1 1.1354 1.1447 0 13366000 7867800 5498300 2665 1919 976 1006 4183;4184;4185 4185 APSHVPFLLIGGGTAAFAAAR 21 0 1 Unmodified _APSHVPFLLIGGGTAAFAAAR_ 0 0 0 O95831;Q5RZA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.0444 3 675.374053 2023.10033 NaN NaN NaN 0.022181 1.498E-05 NaN NaN NaN NaN 114.98 0.54729 114.98 114.72 115.27 0 0 0 0 0.0055442 1 73055 32.353 25.58 1 NaN NaN 0 8826400 0 8826400 2666 1431 977 1007 4186 4186 APSHVPFLLIGGGTAAFAAAR 21 0 1 Unmodified _APSHVPFLLIGGGTAAFAAAR_ 0 0 0 O95831;Q5RZA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.0458 3 675.374053 2023.10033 73827.92 0.8038 0.00054287 -0.16871 -0.00011394 0.63509 0.00042892 675.708109229747 678.710130614426 125.55 0.50943 125.55 125.25 125.76 -7.6294E-06 93 18 8 0 0 0 0.000977 2 75363 30.652 30.652 1 1.28 1.0908 0 5530800 2506900 3024000 2667 1431 977 1007 4187;4188 4187 APSHVPFLLIGGGTAAFAAAR 21 0 1 Unmodified _APSHVPFLLIGGGTAAFAAAR_ 0 0 0 O95831;Q5RZA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.3749 3 675.374053 2023.10033 74244.58 0.79149 0.00053455 -0.13155 -8.8845E-05 0.65994 0.00044571 675.3741813889 678.709894245875 125.34 0.43542 125.34 125.1 125.54 0 93 17 9 0 0 0 4.9953E-06 2 74292 47.814 47.814 1 1.3456 1.1164 0 5512900 2215700 3297300 2668 1431 977 1007 4189;4190 4189 APSIIFIDELDAIGTK 16 1 0 Unmodified _APSIIFIDELDAIGTK_ 0 0 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5;E9PMD8;E9PN50 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 851.9675 2 851.966728 1701.9189 64886.05 0.72187 0.00061501 -0.27223 -0.00023193 0.44963 0.00038307 851.966618955246 855.973830633216 128.35 0.53418 128.35 128.11 128.64 0 202 37 7 0 0 0 1.2378E-08 1 83650 105.65 105.65 1 2.3404 2.4069 0 28766000 8259200 20506000 2669 617 978 1008 4191 4191 APSIIFIDELDAIGTK 16 1 0 Unmodified _APSIIFIDELDAIGTK_ 0 0 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5;E9PMD8;E9PN50 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.9747 2 851.966728 1701.9189 66767.87 1.1128 0.00094806 -0.21157 -0.00018025 0.90122 0.00076781 851.966541693305 855.97375007452 128.01 0.60013 128.01 127.77 128.37 0 178 37 8 0 0 0 3.8413E-68 2 85436 194.24 194.24 1 2.3111 2.4919 0 38051000 11462000 26589000 2670 617 978 1008 4192;4193 4192 APSLTNDEVEEFR 13 0 1 Unmodified _APSLTNDEVEEFR_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.4103 2 753.857177 1505.6998 73067.12 0.32536 0.00024528 0.53721 0.00040498 0.86258 0.00065026 753.857459207075 758.861556358893 74.538 0.4856 74.538 74.289 74.774 0 121 39 5 0 0 0 0.012447 1 43723 58.511 51.131 1 0.83294 0.86077 0 13900000 7695700 6204600 2671 1708 979 1009 4194 4194 APSSLSDAVPQR 12 0 1 Unmodified _APSSLSDAVPQR_ 0 0 0 M0R3F6;A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01;B4DSQ4 M0R3F6 M0R3F6 SUGP2;SFRS14 SURP and G-patch domain-containing protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3256 2 614.320034 1226.62551 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.206 1 43.206 42.706 43.706 0 0 0 0 8.9675E-07 1 23093 101.38 75.759 1 2672 228 980 1010 4195 4195 APSSLSDAVPQR 12 0 1 Unmodified _APSSLSDAVPQR_ 0 0 0 M0R3F6;A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01;B4DSQ4 M0R3F6 M0R3F6 SUGP2;SFRS14 SURP and G-patch domain-containing protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.324 2 614.320034 1226.62551 NaN NaN NaN 0.09599 5.8968E-05 NaN NaN NaN NaN 42.613 0.30651 42.613 42.345 42.651 -3.8147E-06 0 0 0 0.033132 1 22877 46.406 35.043 1 NaN NaN 0 4548800 0 4548800 2673 228 980 1010 4196 4196 APSTWEESGLR 11 0 1 Unmodified _APSTWEESGLR_ 0 0 0 Q9HC36;I3L0T6;I3L443 Q9HC36 Q9HC36 RNMTL1 rRNA methyltransferase 3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.7992 2 616.798934 1231.58332 76715.69 0.39608 0.0002443 -0.26248 -0.0001619 0.13361 8.2409E-05 616.799018670749 621.802407472155 59.431 0.55557 59.431 59.115 59.67 3.8147E-06 144 45 5 0 0 0 0.0081792 1 29649 51.268 46.655 1 1.1759 1.0632 0 2203600 954690 1248900 2674 2051 981 1011 4197 4197 APSTYGGGLSVSSR 14 0 1 Unmodified _APSTYGGGLSVSSR_ 0 0 0 CON__P08779;P08779 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.8381 2 669.836048 1337.65754 NaN NaN NaN -0.25411 -0.00017021 NaN NaN NaN NaN 44.374 0.61604 44.374 44.094 44.71 0 0 0 0 3E-10 2 23958 116.24 105.09 1 NaN NaN 0 42499000 42499000 0 + 2675 1159 982 1012 4198;4199 4198 APSTYGGGLSVSSR 14 0 1 Unmodified _APSTYGGGLSVSSR_ 0 0 0 CON__P08779;P08779 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.8363 2 669.836048 1337.65754 NaN NaN NaN 0.781 0.00052315 NaN NaN NaN NaN 43.523 0.84124 43.523 43.278 44.119 0 0 0 0 4.1993E-31 1 23568 145.91 119.98 1 NaN NaN 0 69543000 69543000 0 + 2676 1159 982 1012 4200 4200 APSTYGGGLSVSSR 14 0 1 Unmodified _APSTYGGGLSVSSR_ 0 0 0 CON__P08779;P08779 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.8358 2 669.836048 1337.65754 NaN NaN NaN -0.2257 -0.00015118 NaN NaN NaN NaN 51.498 0.70103 51.498 51.245 51.946 0 0 0 0 0.00065772 1 25314 77.597 77.597 1 NaN NaN 0 5735700 5735700 0 + 2677 1159 982 1012 4201 4201 APSTYGGGLSVSSR 14 0 1 Unmodified _APSTYGGGLSVSSR_ 0 0 0 CON__P08779;P08779 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.8358 2 669.836048 1337.65754 NaN NaN NaN 0.022632 1.516E-05 NaN NaN NaN NaN 52.026 0.86127 52.026 51.665 52.526 0 0 0 0 0.001745 1 25063 68.515 68.515 1 NaN NaN 0 4099900 4099900 0 + 2678 1159 982 1012 4202 4202 APSTYGGGLSVSSSR 15 0 1 Unmodified _APSTYGGGLSVSSSR_ 0 0 0 CON__P02533;P02533 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.3527 2 713.352062 1424.68957 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.78 1 43.78 43.28 44.28 0 0 0 0 2.1227E-34 1 23450 151.55 120.86 1 + 2679 1150 983 1013 4203 4203 APSTYGGGLSVSSSR 15 0 1 Unmodified _APSTYGGGLSVSSSR_ 0 0 0 CON__P02533;P02533 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.3531 2 713.352062 1424.68957 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.968 1 50.968 50.468 51.468 0 0 0 0 0.00026401 1 25054 82.85 52.596 1 + 2680 1150 983 1013 4204 4204 APSTYGGGLSVSSSR 15 0 1 Unmodified _APSTYGGGLSVSSSR_ 0 0 0 CON__P02533;P02533 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.3526 2 713.352062 1424.68957 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.392 1 51.392 50.892 51.892 0 0 0 0 0.0013452 1 24715 61.375 32.977 1 + 2681 1150 983 1013 4205 4205 APTNIVYK 8 1 0 Unmodified _APTNIVYK_ 0 0 0 B2R7E8;P15927;Q5TEJ7 B2R7E8 B2R7E8 RPA2 Replication protein A 32 kDa subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.7601 2 453.258185 904.501818 NaN NaN NaN -0.060101 -2.7241E-05 NaN NaN NaN NaN 34.858 0.44547 34.858 34.621 35.067 0 0 0 0 0.049526 1 17446 50.127 28.599 1 NaN NaN 0 4200200 4200200 0 2682 850 984 1014 4206 4206 APTSTEANHIR 11 0 1 Unmodified _APTSTEANHIR_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.8041 2 598.804551 1195.59455 77276.31 0.54651 0.00032725 0.54021 0.00032348 1.0867 0.00065073 598.804483331067 603.8087339207 16.701 0.25451 16.701 16.604 16.858 0 49 8 8 0 0 0 1.9389E-13 2 3982 149.72 136.68 1 1.0323 1.0566 0 19077000 9719500 9357000 2683 790 985 1015 4207;4208 4207 APTSTEANHIR 11 0 1 Unmodified _APTSTEANHIR_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.5391 3 399.538793 1195.59455 NaN NaN NaN NaN NaN NaN NaN NaN NaN 16.735 1 16.735 16.235 17.235 0 0 0 0 0.010449 1 3999 55.806 47.919 1 2684 790 985 1015 4209 4209 APTSTEANHIR 11 0 1 Unmodified _APTSTEANHIR_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 399.5384 3 399.538793 1195.59455 94274.38 0.095889 3.8311E-05 0.14244 5.6912E-05 0.23833 9.5223E-05 399.538778493687 402.874867394616 16.667 0.32717 16.667 16.536 16.863 0 50 12 7 0 0 0 4.2143E-11 1 3772 125.75 115.74 1 1.0434 1.035 0 11996000 5797900 6197700 2685 790 985 1015 4210 4210 APTSTEANHIR 11 0 1 Unmodified _APTSTEANHIR_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.8088 2 598.804551 1195.59455 78508.28 0.55733 0.00033373 0.0013138 7.8669E-07 0.55864 0.00033452 598.804540006914 603.808707515064 16.667 0.30147 16.667 16.562 16.863 0 43 11 6 0 0 0 9.6545E-31 2 3773 177.06 161.91 1 1.051 1.0457 0 11785000 5716300 6068900 2686 790 985 1015 4211;4212 4211 APTTAAAAAAGVSSTK 16 1 0 Unmodified _APTTAAAAAAGVSSTK_ 0 0 0 Q53G50;B2R8F3;O15479 Q53G50 Q53G50 MAGEB2 Melanoma-associated antigen B2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.8718 2 687.864805 1373.71506 NaN NaN NaN -0.6241 -0.0004293 NaN NaN NaN NaN 35.363 0.31287 35.363 35.218 35.531 0 0 0 0 2.3012E-47 1 17744 166.62 148.31 1 NaN NaN 0 4855600 0 4855600 2687 861 986 1016 4213 4213 APVIDIGIANTGK 13 1 0 Unmodified _APVIDIGIANTGK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59;A0A0S2Z5C1 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8718 2 634.864077 1267.7136 74916.07 0.67468 0.00042833 0.76957 0.00048858 1.4443 0.00091691 634.864103549925 638.872083385461 88.053 0.55238 88.053 87.713 88.265 0 137 47 4 0 0 0 0.00012317 1 52991 90.653 80.422 1 0.82063 0.82855 0 27370000 12388000 14982000 2688 582 987 1017 4214 4214 APVIDIGIANTGK 13 1 0 Unmodified _APVIDIGIANTGK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59;A0A0S2Z5C1 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.8726 2 634.864077 1267.7136 NaN NaN NaN 0.92105 0.00058474 NaN NaN NaN NaN 100.43 0.48743 100.43 100.2 100.69 0 0 0 0 0.0055307 1 56757 57.348 43.579 1 NaN NaN 0 1958300 0 1958300 2689 582 987 1017 4215 4215 APVIDIGIANTGK 13 1 0 Unmodified _APVIDIGIANTGK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59;A0A0S2Z5C1 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.3657 2 634.864077 1267.7136 77155.48 0.50146 0.00031836 0.96108 0.00061016 1.4625 0.00092852 634.864124221682 638.872136085115 100.27 0.56122 100.27 100.06 100.62 7.6294E-06 132 43 4 0 0 0 0.00026889 4 55938 67.153 67.153 1 0.83024 0.67495 0 4496800 2187600 2309200 2690 582 987 1017 4216;4217;4218;4219 4219 APVLSIDPPVHEVEQGIDAK 20 1 0 Unmodified _APVLSIDPPVHEVEQGIDAK_ 0 0 0 Q96F86 Q96F86 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.0483 3 705.375788 2113.10553 74670.8 0.78532 0.00055394 0.53545 0.00037769 1.3208 0.00093163 705.710874550933 708.047431170255 98.008 0.46893 98.008 97.79 98.259 0 78 40 4 0 0 0 1.4285E-05 1 61229 38.915 38.915 1 2.1146 2.1109 0 14545000 4827000 9718300 2691 1964 988 1018 4220 4220 APVNTAELTDLLIQQNHIGSVIK 23 1 0 Unmodified _APVNTAELTDLLIQQNHIGSVIK_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.465 3 825.458622 2473.35404 66866.55 0.84239 0.00069536 -0.16724 -0.00013805 0.67516 0.00055732 825.792946173954 828.464223905479 119.83 0.59323 119.83 119.48 120.07 0 245 39 9 0 0 0 1.7687E-49 2 77079 162.81 162.81 1 2.4455 2.6348 0 37916000 10586000 27330000 2692 2094 989 1019 4221;4222 4221 APVNTAELTDLLIQQNHIGSVIK 23 1 0 Unmodified _APVNTAELTDLLIQQNHIGSVIK_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.4657 3 825.458622 2473.35404 67181.73 1.0253 0.00084637 -0.30167 -0.00024902 0.72366 0.00059735 825.792928507951 828.463916110104 119.24 0.58124 119.24 118.89 119.47 0 227 39 9 0 0 0 7.2029E-23 2 78515 114.39 114.39 1 2.3782 2.6775 0 57527000 13504000 44022000 2693 2094 989 1019 4223;4224 4223 APVNTAELTDLLIQQNHIGSVIK 23 1 0 Unmodified _APVNTAELTDLLIQQNHIGSVIK_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 825.795 3 825.458622 2473.35404 66471.64 1.3208 0.0010903 -0.039755 -3.2816E-05 1.281 0.0010574 825.793036891952 828.464178118794 132.54 0.39346 132.54 132.36 132.75 0 128 17 12 0 0 0 0.033057 1 80583 14.138 14.138 1 2.3236 1.8631 0 21103000 6177700 14925000 2694 2094 989 1019 4225 4225 APVNTAELTDLLIQQNHIGSVIK 23 1 0 Unmodified _APVNTAELTDLLIQQNHIGSVIK_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 828.1309 3 825.458622 2473.35404 67451.19 1.3082 0.0010799 0.25435 0.00020995 1.5626 0.0012898 825.793369274617 828.464408461958 132.27 0.38589 132.27 132.07 132.46 0 73 16 7 0 0 0 0.0011263 1 79430 27.168 27.168 1 2.359 1.8945 0 14972000 4294200 10678000 2695 2094 989 1019 4226 4226 APVPASELLASGVLSR 16 0 1 Unmodified _APVPASELLASGVLSR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.9512 2 783.94613 1565.87771 69275.68 0.77704 0.00060916 0.068908 5.402E-05 0.84595 0.00066318 783.946262375581 788.950416590682 110.05 0.65762 110.05 109.79 110.45 0 239 45 8 0 0 0 6.5919E-34 1 68913 158.01 141.92 1 1.8516 2.1355 0 153590000 55715000 97879000 2696 1754 990 1020 4227 4227 APVPASELLASGVLSR 16 0 1 Unmodified _APVPASELLASGVLSR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.951 2 783.94613 1565.87771 69212.28 0.67146 0.00052639 -0.099308 -7.7852E-05 0.57215 0.00044853 783.94598120891 788.950299333507 109.46 0.63758 109.46 109.21 109.85 -7.6294E-06 243 42 8 0 0 0 1.9809E-44 1 70146 164.48 142.72 1 1.8507 2.1147 0 89932000 33248000 56685000 2697 1754 990 1020 4228 4228 APVPASELLASGVLSR 16 0 1 Unmodified _APVPASELLASGVLSR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 788.95 2 783.94613 1565.87771 69253.33 0.85158 0.00066759 -0.10962 -8.594E-05 0.74196 0.00058165 784.447592274891 788.95017931863 121.35 0.53902 121.35 121.1 121.64 0 135 24 8 0 0 0 0.00019803 1 72081 59.975 51.246 1 2.7039 2.2297 0 18587000 5527400 13060000 2698 1754 990 1020 4229 4229 APVPASELLASGVLSR 16 0 1 Unmodified _APVPASELLASGVLSR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.4515 2 783.94613 1565.87771 68755.29 0.79967 0.0006269 -0.119 -9.3287E-05 0.68067 0.00053361 783.945838986491 788.950235220233 121.1 0.48501 121.1 120.89 121.37 0 141 23 9 0 0 0 0.00015541 2 71009 72.496 59.296 1 2.386 2.0042 0 17047000 5141900 11905000 2699 1754 990 1020 4230;4231 4230 APVPGTPDSLSSGSSR 16 0 1 Unmodified _APVPGTPDSLSSGSSR_ 0 0 0 Q9UJZ1;A0A087WYB4 Q9UJZ1 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.8765 2 757.875901 1513.73725 70908.37 0.71716 0.00054352 -0.11597 -8.7893E-05 0.60119 0.00045562 757.87592360212 762.880018145971 48.41 0.54499 48.41 48.14 48.685 0 169 42 6 0 0 0 6.1992E-07 2 26428 98.156 90.776 1 1.368 1.4052 0 19441000 9107000 10334000 2700 2104 991 1021 4232;4233 4232 APVPGTPDSLSSGSSR 16 0 1 Unmodified _APVPGTPDSLSSGSSR_ 0 0 0 Q9UJZ1;A0A087WYB4 Q9UJZ1 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.8759 2 757.875901 1513.73725 70487.09 0.64529 0.00048905 0.10134 7.6803E-05 0.74663 0.00056586 757.875751748558 762.879800585269 47.221 0.42263 47.221 47.051 47.474 0 126 30 7 0 0 0 0.00015265 1 26255 66.267 56.035 1 1.123 1.228 0 35078000 17096000 17982000 2701 2104 991 1021 4234 4234 APVPGTPDSLSSGSSR 16 0 1 Unmodified _APVPGTPDSLSSGSSR_ 0 0 0 Q9UJZ1;A0A087WYB4 Q9UJZ1 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.8806 2 757.875901 1513.73725 70328.17 0.65267 0.00049465 -0.27782 -0.00021056 0.37485 0.00028409 758.377242260467 762.880000895985 56.212 0.41523 56.212 56.03 56.445 0 79 27 5 0 0 0 0.032239 1 27658 24.071 20.308 1 1.619 1.4119 0 946550 388220 558330 2702 2104 991 1021 4235 4235 APVPTGEVYFADSFDR 16 0 1 Unmodified _APVPTGEVYFADSFDR_ 0 0 0 P27824;H0Y9Q7;Q16094;D6RB85;D6RDP7;D6RAQ8;D6RAU8;D6RHJ3;D6RD16 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 891.4279 2 885.920309 1769.82606 65617.31 0.57168 0.00050647 -0.061437 -5.4429E-05 0.51025 0.00045204 885.920149426027 890.924321368896 104.16 0.66537 104.16 103.83 104.5 7.6294E-06 281 55 7 0 0 0 1.8665E-06 3 64254 94.191 94.191 1 0.82634 0.8471 0 25953000 13703000 12251000 2703 1526 992 1022 4236;4237;4238 4238 APVPTGEVYFADSFDR 16 0 1 Unmodified _APVPTGEVYFADSFDR_ 0 0 0 P27824;H0Y9Q7;Q16094;D6RB85;D6RDP7;D6RAQ8;D6RAU8;D6RHJ3;D6RD16 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 890.9246 2 885.920309 1769.82606 65779.22 0.11555 0.00010237 0.65713 0.00058217 0.77268 0.00068453 885.920787257426 890.924760131062 103.41 0.62063 103.41 103.18 103.8 0 276 51 8 0 0 0 5.3665E-05 3 65334 83.314 83.314 1 0.8407 0.92157 0 40044000 22805000 17239000 2704 1526 992 1022 4239;4240;4241 4240 APVPTGEVYFADSFDR 16 0 1 Unmodified _APVPTGEVYFADSFDR_ 0 0 0 P27824;H0Y9Q7;Q16094;D6RB85;D6RDP7;D6RAQ8;D6RAU8;D6RHJ3;D6RD16 P27824 P27824 CANX Calnexin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 890.9246 2 885.920309 1769.82606 NaN NaN NaN -0.084097 -7.4504E-05 NaN NaN NaN NaN 115.67 0.39287 115.67 115.41 115.8 7.6294E-06 0 0 0 0.013692 1 66869 43.991 37.888 1 NaN NaN 0 3605700 0 3605700 2705 1526 992 1022 4242 4242 APVQPQQSPAAAPGGTDEK 19 1 0 Unmodified _APVQPQQSPAAAPGGTDEK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q9NSM5;C9JPC0;F8WBS8 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 928.9639 2 924.957954 1847.90136 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.743 1 29.743 29.243 30.243 1.9073E-06 0 0 0 0.00022061 1 14456 61.212 47.306 1 2706 1707 993 1023 4243 4243 APVQPQQSPAAAPGGTDEK 19 1 0 Unmodified _APVQPQQSPAAAPGGTDEK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q9NSM5;C9JPC0;F8WBS8 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.4665 2 924.957954 1847.90136 NaN NaN NaN -0.27935 -0.00025838 NaN NaN NaN NaN 29.47 0.35095 29.47 29.23 29.581 -1.9073E-06 0 0 0 1.5453E-13 2 14182 103.83 96.704 1 NaN NaN 0 8707000 0 8707000 2707 1707 993 1023 4244;4245 4245 APVQPQQSPAAAPGGTDEKPSGK 23 2 0 Unmodified _APVQPQQSPAAAPGGTDEKPSGK_ 0 0 1 Q59EG8;Q13200;B4DM22;Q9NSM5;C9JPC0;F8WBS8 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 745.3832 3 740.041468 2217.10257 73550.9 0.58343 0.00043177 -0.50923 -0.00037685 0.074203 5.4913E-05 740.375601301211 745.383221328838 29.015 0.28433 29.015 28.871 29.156 -1.9073E-06 88 24 6 0 0 0 0.029675 1 11717 18.402 18.402 1 2.7036 2.3583 0 3141500 933510 2207900 2708 1707 994 1024 4246 4246 APVQPQQSPAAAPGGTDEKPSGK 23 2 0 Unmodified _APVQPQQSPAAAPGGTDEKPSGK_ 0 0 1 Q59EG8;Q13200;B4DM22;Q9NSM5;C9JPC0;F8WBS8 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 745.7186 3 740.041468 2217.10257 71626.6 0.27375 0.00020258 -0.35784 -0.00026482 -0.084094 -6.2233E-05 740.041499177885 745.383156584889 29.397 0.31749 29.397 29.198 29.515 0 88 18 8 0 0 0 0.00085859 1 11470 32.025 32.025 1 2.6367 2.2953 0 2481200 452860 2028400 2709 1707 994 1024 4247 4247 APWCYTTNSEVR 12 0 1 Unmodified _APWCYTTNSEVR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.8361 2 742.335358 1482.65616 NaN NaN NaN 0.021343 1.5843E-05 NaN NaN NaN NaN 58.179 0.77188 58.179 57.973 58.745 0 0 0 0 0.0021418 1 32886 70.028 63.339 1 NaN NaN 0 14787000 14787000 0 + 2710 1157 995 1025 4248 4248 APWCYTTNSEVR 12 0 1 Unmodified _APWCYTTNSEVR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.337 2 742.335358 1482.65616 NaN NaN NaN 0.69257 0.00051412 NaN NaN NaN NaN 57.003 0.55749 57.003 56.828 57.386 -3.8147E-06 0 0 0 0.0014978 1 32836 77.379 72.159 1 NaN NaN 0 11896000 11896000 0 + 2711 1157 995 1025 4249 4249 APWELLELR 9 0 1 Unmodified _APWELLELR_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.8207 2 563.816399 1125.61824 82117.82 0.81417 0.00045904 -0.004939 -2.7847E-06 0.80923 0.00045626 563.81625556313 568.82036494582 114.99 0.66951 114.99 114.74 115.41 0 147 43 5 0 0 0 0.0018407 2 72994 80.165 80.165 1 2.9635 3.0994 0 12998000 3127900 9870500 2712 567 996 1026 4250;4251 4250 APWELLELR 9 0 1 Unmodified _APWELLELR_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.8209 2 563.816399 1125.61824 80809.45 0.81585 0.00045999 -0.38398 -0.00021649 0.43187 0.0002435 563.816048548339 568.820213232282 114.43 0.65974 114.43 114.14 114.8 0 150 43 5 0 0 0 0.0049382 2 74267 67.993 60.772 1 2.5172 2.4965 0 12008000 3659200 8348800 2713 567 996 1026 4252;4253 4252 APWELLELR 9 0 1 Unmodified _APWELLELR_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.8203 2 563.816399 1125.61824 82546.27 0.89912 0.00050694 -0.36185 -0.00020402 0.53727 0.00030292 563.816036868467 568.82026637652 126.38 0.50491 126.38 126.13 126.63 -7.6294E-06 53 16 5 0 0 0 0.0067422 1 76024 63.419 63.419 1 2.0131 1.7798 0 1134700 351890 782790 2714 567 996 1026 4254 4254 AQAAAPASVPAQAPK 15 1 0 Unmodified _AQAAAPASVPAQAPK_ 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.3785 2 689.377883 1376.74121 73124.68 0.7864 0.00054213 -0.093349 -6.4353E-05 0.69305 0.00047777 689.378049700052 693.384839971078 37.224 0.93298 37.224 37.004 37.937 0 512 78 11 0 0 0 1.6912E-07 3 18852 109.24 109.24 1 0.75995 0.91852 0 1674600000 908710000 765920000 2715 127 997 1027 4255;4256;4257 4256 AQAAAPASVPAQAPK 15 1 0 Unmodified _AQAAAPASVPAQAPK_ 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3785 2 689.377883 1376.74121 72388.63 0.87258 0.00060154 -0.46992 -0.00032395 0.40267 0.00027759 689.377807588012 693.384585265453 36.386 0.89169 36.386 36.131 37.023 0 495 70 12 0 0 0 3.5368E-07 2 18592 105.46 105.46 1 0.74726 0.88435 0 2118400000 1234500000 883880000 2716 127 997 1027 4258;4259 4259 AQAAAPASVPAQAPK 15 1 0 Unmodified _AQAAAPASVPAQAPK_ 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.3784 2 689.377883 1376.74121 72177.2 0.46632 0.00032147 -0.13432 -9.26E-05 0.332 0.00022887 689.378075535077 693.384797476971 42.788 1.4828 42.788 42.42 43.903 0 633 99 12 0 0 0 7.2116E-06 4 19907 95.094 95.094 1 0.55664 0.48966 0 237760000 152360000 85393000 2717 127 997 1027 4260;4261;4262;4263 4261 AQAAAPASVPAQAPK 15 1 0 Unmodified _AQAAAPASVPAQAPK_ 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3784 2 689.377883 1376.74121 73210.27 0.20874 0.0001439 -0.0041801 -2.8817E-06 0.20456 0.00014102 689.378319332165 693.384795189621 42.978 1.426 42.978 42.606 44.032 0 566 90 12 0 0 0 5.2631E-07 3 19463 101.93 97.63 1 0.59095 0.51186 0 255310000 162890000 92419000 2718 127 997 1027 4264;4265;4266 4264 AQAALAVNISAAR 13 0 1 Unmodified _AQAALAVNISAAR_ 0 0 0 Q59ET3;B2R9K8;A0A024RDL1;P40227 Q59ET3 Q59ET3 CCT6A T-complex protein 1 subunit zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3633 2 628.359493 1254.70443 77669.63 0.28651 0.00018003 -0.2036 -0.00012793 0.082911 5.2098E-05 628.359131640627 633.363661073577 70.004 0.52941 70.004 69.815 70.345 0 108 44 4 0 0 0 1.8589E-13 2 40652 130.01 130.01 1 1.4822 1.5116 0 18696000 7495000 11201000 2719 389 998 1028 4267;4268 4268 AQAALAVNISAAR 13 0 1 Unmodified _AQAALAVNISAAR_ 0 0 0 Q59ET3;B2R9K8;A0A024RDL1;P40227 Q59ET3 Q59ET3 CCT6A T-complex protein 1 subunit zeta ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.3638 2 628.359493 1254.70443 NaN NaN NaN -0.062913 -3.9532E-05 NaN NaN NaN NaN 80.101 0.3493 80.101 79.897 80.247 0 0 0 0 0.028447 1 43270 43.544 32.392 1 NaN NaN 0 1153800 0 1153800 2720 389 998 1028 4269 4269 AQAEAQQPTFDALRDELR 18 0 2 Unmodified _AQAEAQQPTFDALRDELR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.6846 3 687.01162 2058.01303 72707.7 0.81142 0.00055745 -0.25339 -0.00017408 0.55803 0.00038337 687.345102458709 693.683926054281 84.959 0.70175 84.959 84.604 85.306 0 368 58 9 0 0 0 8.1519E-08 2 50905 87.388 87.388 1 1.3235 1.438 0 37834000 14161000 23673000 2721 1754 999 1029 4270;4271 4270 AQAEAQQPTFDALRDELR 18 0 2 Unmodified _AQAEAQQPTFDALRDELR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.6838 3 687.01162 2058.01303 72458.12 0.97686 0.00067111 -0.28305 -0.00019446 0.69381 0.00047665 687.011647294798 693.68395269027 83.912 0.65259 83.912 83.617 84.269 0 356 54 9 0 0 0 2.9205E-08 2 51382 93.495 93.495 1 1.528 1.7531 0 52462000 19013000 33448000 2722 1754 999 1029 4272;4273 4272 AQAEAQQPTFDALRDELR 18 0 2 Unmodified _AQAEAQQPTFDALRDELR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.6846 3 687.01162 2058.01303 73371.02 0.64013 0.00043978 0.40202 0.0002762 1.0422 0.00071598 687.34641673774 693.68389652105 97.562 0.59716 97.562 97.179 97.776 0 147 32 7 0 0 0 0.0045589 2 54856 29.444 29.444 1 3.0128 2.6033 0 5095500 1307000 3788500 2723 1754 999 1029 4274;4275 4275 AQAEAQQPTFDALRDELR 18 0 2 Unmodified _AQAEAQQPTFDALRDELR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.6842 3 687.01162 2058.01303 NaN NaN NaN 0.46093 0.00031666 NaN NaN NaN NaN 97.438 0.56239 97.438 97.115 97.677 0 0 0 0 0.005207 1 53985 45.608 26.316 1 NaN NaN 0 4396900 0 4396900 2724 1754 999 1029 4276 4276 AQAELVGTADEATR 14 0 1 Unmodified _AQAELVGTADEATR_ 0 0 0 P30049 P30049 P30049 ATP5D ATP synthase subunit delta, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.3612 2 716.357345 1430.70014 NaN NaN NaN 0.06328 4.5331E-05 NaN NaN NaN NaN 42.819 0.36893 42.819 42.597 42.966 0 0 0 0 2.3654E-07 1 23067 105.17 47.822 1 NaN NaN 0 7380100 0 7380100 2725 1531 1000 1030 4277 4277 AQAEVEGLGK 10 1 0 Unmodified _AQAEVEGLGK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.2737 2 501.266739 1000.51892 88100.85 -0.18717 -9.3823E-05 -0.076572 -3.8383E-05 -0.26374 -0.00013221 501.266850957487 505.273715789694 29.17 0.25345 29.17 29.023 29.277 0 41 14 4 0 0 0 0.00035656 1 14083 88.948 61.694 1 1.4272 1.4904 0 29936000 10829000 19107000 2726 1754 1001 1031 4278 4278 AQAEVEGLGK 10 1 0 Unmodified _AQAEVEGLGK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2682 2 501.266739 1000.51892 NaN NaN NaN 0.47475 0.00023797 NaN NaN NaN NaN 28.445 0.29807 28.445 28.345 28.643 1.9073E-06 0 0 0 0.0085607 1 13635 76.679 59.903 1 NaN NaN 0 7703200 7703200 0 2727 1754 1001 1031 4279 4279 AQALEDLAGFK 11 1 0 Unmodified _AQALEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.809 2 581.808771 1161.60299 78996.87 0.6734 0.00039179 -0.068063 -3.9599E-05 0.60534 0.00035219 581.809134754926 585.815851155064 85.346 1.1904 85.346 85.081 86.272 0 557 98 10 0 0 0 1.4269E-05 2 51143 107.15 88.176 1 1.8249 2.2138 0 2121300000 749930000 1371400000 2728 1569 1002 1032 4280;4281 4281 AQALEDLAGFK 11 1 0 Unmodified _AQALEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.8087 2 581.808771 1161.60299 79450.65 0.59371 0.00034543 -0.23489 -0.00013666 0.35882 0.00020877 581.808867534249 585.815746847141 84.349 0.96907 84.349 84.049 85.018 0 556 78 10 0 0 0 7.3374E-08 2 51644 113.71 98.446 1 1.7281 2.0418 0 1287000000 473170000 813880000 2729 1569 1002 1032 4282;4283 4283 AQALEDLAGFK 11 1 0 Unmodified _AQALEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.8154 2 581.808771 1161.60299 NaN NaN NaN -0.05327 -3.0993E-05 NaN NaN NaN NaN 92.334 0.45271 92.334 92.135 92.588 0 0 0 0 0.022907 1 51397 52.278 44.353 1 NaN NaN 0 938920 0 938920 2730 1569 1002 1032 4284 4284 AQALEDLAGFK 11 1 0 Unmodified _AQALEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.8094 2 581.808771 1161.60299 NaN NaN NaN 0.86481 0.00050316 NaN NaN NaN NaN 97.923 1.2906 97.923 97.632 98.922 -7.6294E-06 0 0 0 0.0015136 1 55067 82.749 73.392 1 NaN NaN 0 79225000 79225000 0 2731 1569 1002 1032 4285 4285 AQALEELTGFR 11 0 1 Unmodified _AQALEELTGFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.8287 2 617.824952 1233.63535 NaN NaN NaN -0.67744 -0.00041854 NaN NaN NaN NaN 89.608 1.0221 89.608 89.24 90.262 0 0 0 0 1.2181E-11 1 54098 119.68 107.15 1 NaN NaN 0 106900000 0 106900000 2732 1569 1003 1033 4286 4286 AQALEELTGFR 11 0 1 Unmodified _AQALEELTGFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8289 2 617.824952 1233.63535 74486.8 0.43884 0.00027113 -0.87334 -0.00053957 -0.4345 -0.00026845 618.325475505362 622.828859909171 88.635 1.3443 88.635 87.963 89.308 7.6294E-06 685 117 8 0 0 0 7.3902E-08 4 54923 113.62 106.56 1 1.2219 1.409 0 231420000 102050000 129370000 2733 1569 1003 1033 4287;4288;4289;4290 4289 AQALEELTGFR 11 0 1 Unmodified _AQALEELTGFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.8287 2 617.824952 1233.63535 76611.82 0.47245 0.00029189 -0.61884 -0.00038233 -0.14639 -9.0441E-05 617.824412561503 622.828717132938 102.61 1.6873 102.61 101.87 103.56 -7.6294E-06 608 116 8 0 0 0 0.00031294 4 58479 87.913 84.074 1 3.3367 2.8775 0 74279000 16778000 57501000 2734 1569 1003 1033 4291;4292;4293;4294 4294 AQALEELTGFR 11 0 1 Unmodified _AQALEELTGFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.829 2 617.824952 1233.63535 76518.71 0.36315 0.00022436 -0.5312 -0.00032819 -0.16806 -0.00010383 617.824456167387 622.828750179558 102.51 1.4623 102.51 101.73 103.19 0 574 104 9 0 0 0 3.12E-08 4 57482 120.45 111.92 1 3.2345 2.8226 0 67324000 15453000 51871000 2735 1569 1003 1033 4295;4296;4297;4298 4297 AQATAQDPVFQK 12 1 0 Unmodified _AQATAQDPVFQK_ 0 0 0 F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 F2Z2U4 F2Z2U4 TRRAP Transformation/transcription domain-associated protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3357 2 652.335684 1302.65681 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.174 1 37.174 36.674 37.674 0 0 0 0 0.017148 1 19260 67.113 30.42 1 2736 1253 1004 1034 4299 4299 AQAVSEEEEEEEGK 14 1 0 Unmodified _AQAVSEEEEEEEGK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;Q59FS7;B4DGI6;Q9P054 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.3359 2 782.336472 1562.65839 70102.68 0.53419 0.00041792 -0.1825 -0.00014277 0.3517 0.00027514 782.335826610631 786.343969567374 20.088 0.23867 20.088 19.966 20.205 0 27 6 6 0 0 0 1.3189E-21 2 6588 148.28 145.77 1 0.92774 0.96774 0 12242000 6371300 5871000 2737 993 1005 1035 4300;4301 4301 AQAVSEEEEEEEGK 14 1 0 Unmodified _AQAVSEEEEEEEGK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;Q59FS7;B4DGI6;Q9P054 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.3997 2 782.336472 1562.65839 NaN NaN NaN -0.031729 -2.4823E-05 NaN NaN NaN NaN 20.005 0.11891 20.005 19.954 20.073 0 0 0 0 0.043699 1 6338 39.625 28.46 1 NaN NaN 0 1236200 0 1236200 2738 993 1005 1035 4302 4302 AQAVSEEEEEEEGK 14 1 0 Unmodified _AQAVSEEEEEEEGK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;Q59FS7;B4DGI6;Q9P054 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 786.3444 2 782.336472 1562.65839 69340.31 0.30552 0.00023902 0.77878 0.00060927 1.0843 0.00084829 782.33735627985 786.344011569426 22.271 0.28787 22.271 22.125 22.413 1.9073E-06 53 10 7 0 0 0 0.00020564 2 7103 68.536 68.536 1 1.2844 0.9993 0 3375000 1294200 2080800 2739 993 1005 1035 4303;4304 4303 AQCPIVER 8 0 1 Unmodified _AQCPIVER_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;Q59EK8 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.7542 2 486.750201 971.48585 83104.04 -0.013771 -6.7032E-06 -0.4526 -0.00022031 -0.46638 -0.00022701 486.750264716579 491.75436733983 25.681 0.55099 25.681 25.453 26.004 1.9073E-06 177 30 9 0 0 0 0.0012974 2 11184 110.31 90.765 1 1.0184 1.1674 0 134160000 63932000 70227000 2740 160 1006 1036 4305;4306 4305 AQCPIVER 8 0 1 Unmodified _AQCPIVER_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;Q59EK8 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2557 2 486.750201 971.48585 85000.35 0.62368 0.00030358 -1.0113 -0.00049224 -0.38759 -0.00018866 486.750073222461 491.753780718531 25.429 0.68999 25.429 24.938 25.628 0 142 27 10 0 0 0 0.0017244 3 11031 106.36 89.169 1 1.1069 1.2774 0 240420000 112950000 127470000 2741 160 1006 1036 4307;4308;4309 4309 AQCPIVER 8 0 1 Unmodified _AQCPIVER_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;Q59EK8 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.7499 2 486.750201 971.48585 87189.86 0.15135 7.3669E-05 0.1738 8.4599E-05 0.32515 0.00015827 486.750055484326 491.754360367676 28.394 0.54974 28.394 28.084 28.633 0 119 27 7 0 0 0 0.0092293 2 11358 75.213 67.983 1 0.92495 0.75453 0 15425000 7629500 7795500 2742 160 1006 1036 4310;4311 4311 AQCPIVER 8 0 1 Unmodified _AQCPIVER_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;Q59EK8 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.754 2 486.750201 971.48585 85926.77 -0.073786 -3.5916E-05 0.020716 1.0084E-05 -0.05307 -2.5832E-05 486.750122829646 491.754423501424 28.422 0.65439 28.422 28.064 28.718 1.9073E-06 137 35 6 0 0 0 0.0085084 1 10794 78.324 62.884 1 0.8293 0.66866 0 11057000 5835100 5222000 2743 160 1006 1036 4312 4312 AQDEAFALQDVPLSSVVR 18 0 1 Unmodified _AQDEAFALQDVPLSSVVR_ 0 0 0 Q53G19;Q9Y3B7;H0YCD5 Q53G19 Q53G19 MRPL11 39S ribosomal protein L11, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.0091 2 973.004904 1943.99526 NaN NaN NaN -0.59728 -0.00058116 NaN NaN NaN NaN 117.48 0.45662 117.48 117.22 117.68 7.6294E-06 0 0 0 3.5676E-09 1 75229 84.468 76.603 1 NaN NaN 0 9486400 0 9486400 2744 1785 1007 1037 4313 4313 AQDEAFALQDVPLSSVVR 18 0 1 Unmodified _AQDEAFALQDVPLSSVVR_ 0 0 0 Q53G19;Q9Y3B7;H0YCD5 Q53G19 Q53G19 MRPL11 39S ribosomal protein L11, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 978.009 2 973.004904 1943.99526 NaN NaN NaN -0.55412 -0.00053916 NaN NaN NaN NaN 117 0.45542 117 116.79 117.24 0 0 0 0 5.0302E-17 1 76701 109.84 97.071 1 NaN NaN 0 10760000 0 10760000 2745 1785 1007 1037 4314 4314 AQDEGLLSDVVPFK 14 1 0 Unmodified _AQDEGLLSDVVPFK_ 0 0 0 P55084;B4DY96;F5GZQ3;D6W539;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.4033 2 759.395938 1516.77732 70627.23 0.8012 0.00060843 0.35848 0.00027223 1.1597 0.00088065 759.395809877193 763.403238557234 115.98 0.52172 115.98 115.71 116.23 0 188 30 9 0 0 0 3.6786E-14 4 73848 126.1 115.14 1 1.097 1.1248 0 28541000 15275000 13266000 2746 1615 1008 1038 4315;4316;4317;4318 4316 AQDEGLLSDVVPFK 14 1 0 Unmodified _AQDEGLLSDVVPFK_ 0 0 0 P55084;B4DY96;F5GZQ3;D6W539;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.4048 2 759.395938 1516.77732 70592.38 0.80505 0.00061135 0.25075 0.00019042 1.0558 0.00080177 759.395511547222 763.403453092006 115.43 0.67101 115.43 115.01 115.68 7.6294E-06 186 43 7 0 0 0 2.7399E-09 3 75187 115.33 109.33 1 1.0927 1.2075 0 44751000 21538000 23214000 2747 1615 1008 1038 4319;4320;4321 4319 AQDEGLLSDVVPFK 14 1 0 Unmodified _AQDEGLLSDVVPFK_ 0 0 0 P55084;B4DY96;F5GZQ3;D6W539;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 759.899 2 759.395938 1516.77732 69600.43 0.72934 0.00055385 -0.25789 -0.00019584 0.47145 0.00035802 759.395765250463 763.403435495026 127.54 0.62643 127.54 127.3 127.93 0 121 24 8 0 0 0 0.00019192 4 76816 70.488 64.643 1 0.96266 0.76984 0 7067200 3343300 3723900 2748 1615 1008 1038 4322;4323;4324;4325 4324 AQDEGLLSDVVPFK 14 1 0 Unmodified _AQDEGLLSDVVPFK_ 0 0 0 P55084;B4DY96;F5GZQ3;D6W539;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.9055 2 759.395938 1516.77732 70275.61 0.76703 0.00058248 0.16693 0.00012676 0.93395 0.00070924 759.395903587091 763.402868282172 127.38 0.55016 127.38 127.1 127.65 0 136 23 8 0 0 0 0.0011912 1 75782 55.452 51.689 1 0.98394 0.80201 0 7622200 3857800 3764400 2749 1615 1008 1038 4326 4326 AQDIETLK 8 1 0 Unmodified _AQDIETLK_ 0 0 0 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.258 2 459.250557 916.486562 96835.95 0.34296 0.0001575 -0.21311 -9.7869E-05 0.12985 5.9635E-05 459.250263932796 463.257630189425 30.98 0.24277 30.98 30.845 31.088 0 48 21 5 0 0 0 0.031577 1 15233 51.193 19.351 1 2.0661 2.0373 0 9222900 3481100 5741700 2750 1870 1009 1039 4327 4327 AQDIETLK 8 1 0 Unmodified _AQDIETLK_ 0 0 0 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2577 2 459.250557 916.486562 95911.63 -0.0012537 -5.7576E-07 -0.31563 -0.00014495 -0.31689 -0.00014553 459.250077367542 463.257665365823 30.393 0.21472 30.393 30.273 30.488 0 55 16 5 0 0 0 0.015121 1 14864 61.962 24.404 1 1.7712 1.7911 0 13120000 4859600 8260500 2751 1870 1009 1039 4328 4328 AQDSSLHMPER 11 0 1 Oxidation (M) _AQDSSLHM(ox)PER_ AQDSSLHM(1)PER AQDSSLHM(74.84)PER 0 1 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.793 2 643.793326 1285.5721 73913.7 0.82189 0.00052912 -0.5674 -0.00036529 0.25448 0.00016383 643.792650456362 648.79736693444 16.235 0.41972 16.235 15.986 16.406 0 98 23 6 0 0 0 0.00023476 2 3615 74.841 64.837 1 1.1502 1.1926 0 13693000 6389300 7303700 2752 1997 1010 1040 4329;4330 4330 1832 AQDTQPSDATSAPGAEGLEPPAAR 24 0 1 Unmodified _AQDTQPSDATSAPGAEGLEPPAAR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1174.0557 2 1169.0513 2336.08805 56659.61 0.006907 8.0746E-06 0.48268 0.00056428 0.48959 0.00057235 1169.55333563603 1174.55740039539 64.275 0.87251 64.275 63.815 64.687 0 614 78 11 0 0 0 2.2728E-20 2 37128 103.13 103.13 1 1.308 1.4984 0 132180000 56595000 75581000 2753 1914 1011 1041 4331;4332 4332 AQDTQPSDATSAPGAEGLEPPAAR 24 0 1 Unmodified _AQDTQPSDATSAPGAEGLEPPAAR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1174.5579 2 1169.0513 2336.08805 56570.25 -0.023331 -2.7276E-05 0.27707 0.00032391 0.25374 0.00029664 1169.55311147144 1174.55722696918 63.241 0.94518 63.241 62.753 63.698 0 631 80 12 0 0 0 4.4884E-16 4 37384 96.993 96.993 1 1.3834 1.5762 0 133920000 57747000 76177000 2754 1914 1011 1041 4333;4334;4335;4336 4335 AQDTQPSDATSAPGAEGLEPPAAR 24 0 1 Unmodified _AQDTQPSDATSAPGAEGLEPPAAR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1169.5529 2 1169.0513 2336.08805 56281.82 0.037207 4.3497E-05 0.15424 0.00018031 0.19144 0.00022381 1169.55304069774 1174.55695683473 73.956 1.2009 73.956 73.371 74.572 0 747 85 13 0 0 0 1.1156E-15 2 39359 92.439 92.439 1 1.6039 1.3826 0 69286000 26947000 42339000 2755 1914 1011 1041 4337;4338 4337 AQDTQPSDATSAPGAEGLEPPAAR 24 0 1 Unmodified _AQDTQPSDATSAPGAEGLEPPAAR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1174.5571 2 1169.0513 2336.08805 56036.5 0.051916 6.0692E-05 -0.0034847 -4.0738E-06 0.048431 5.6618E-05 1169.55280395431 1174.55683561772 74.499 1.2469 74.499 73.971 75.218 0 644 81 12 0 0 0 1.9144E-15 2 38905 87.429 87.429 1 1.642 1.4328 0 64513000 24399000 40114000 2756 1914 1011 1041 4339;4340 4339 AQDVLVQEMEVVK 13 1 0 Oxidation (M) _AQDVLVQEM(ox)EVVK_ AQDVLVQEM(1)EVVK AQDVLVQEM(54.47)EVVK 0 1 0 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.3992 2 752.389799 1502.76504 73978.75 0.68008 0.00051168 -0.014576 -1.0967E-05 0.6655 0.00050072 752.891110388629 756.39713885534 69.186 0.33138 69.186 68.998 69.329 0 53 28 4 0 0 0 0.0010962 2 40179 54.471 45.879 1 1.4019 1.4174 0 5641800 1846800 3795000 2757 957 1012 1042 4341;4342 4342 773 AQDVLVQEMEVVK 13 1 0 Oxidation (M) _AQDVLVQEM(ox)EVVK_ AQDVLVQEM(1)EVVK AQDVLVQEM(53.57)EVVK 0 1 0 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.3962 2 752.389799 1502.76504 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.644 1 67.644 67.144 68.144 0 0 0 0 0.0050464 1 40095 53.569 12.029 1 2758 957 1012 1042 4343 4343 773 AQEEADYIEWLK 12 1 0 Unmodified _AQEEADYIEWLK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.8608 2 747.859189 1493.70382 71846.59 0.57795 0.00043222 -0.016014 -1.1976E-05 0.56194 0.00042025 747.859154641395 752.367987491991 104.14 0.54798 104.14 103.87 104.42 0 82 44 4 0 0 0 0.0071291 1 64249 48.741 47.268 1 0.32872 0.33385 0 6219200 4229500 1989700 2759 1916 1013 1043 4344 4344 AQEEADYIEWLK 12 1 0 Unmodified _AQEEADYIEWLK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.8593 2 747.859189 1493.70382 NaN NaN NaN 0.4612 0.00034491 NaN NaN NaN NaN 103.51 0.4437 103.51 103.26 103.7 0 0 0 0 0.0018377 1 65413 73.499 55.188 1 NaN NaN 0 5490200 5490200 0 2760 1916 1013 1043 4345 4345 AQEEADYIEWLK 12 1 0 Unmodified _AQEEADYIEWLK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.8658 2 747.859189 1493.70382 73252.98 0.79916 0.00059766 -0.098194 -7.3435E-05 0.70097 0.00052423 747.858729195861 751.865668957132 115.89 0.50044 115.89 115.64 116.14 7.6294E-06 97 24 7 0 0 0 0.008176 1 67138 48.004 42.032 1 1.1471 0.89853 0 3346800 1847300 1499500 2761 1916 1013 1043 4346 4346 AQEEYEQIQAK 11 1 0 Unmodified _AQEEYEQIQAK_ 0 0 0 Q9P031 Q9P031 Q9P031 CCDC59 Thyroid transcription factor 1-associated protein 26 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.8227 2 668.822606 1335.63066 76741.92 0.48805 0.00032642 -0.23194 -0.00015513 0.2561 0.00017129 668.822790537943 672.82910753303 35.109 0.89866 35.109 34.522 35.42 0 139 76 3 0 0 0 0.060689 2 15483 33.229 30.126 1 1.161 0.91106 0 3927700 1509700 2418000 2762 2090 1014 1044 4347;4348 4347 AQEEYEQIQAK 11 1 0 Unmodified _AQEEYEQIQAK_ 0 0 0 Q9P031 Q9P031 Q9P031 CCDC59 Thyroid transcription factor 1-associated protein 26 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.8236 2 668.822606 1335.63066 76150.04 0.69094 0.00046212 0.11158 7.463E-05 0.80253 0.00053675 668.822968216385 672.829242635809 35.186 0.72802 35.186 34.671 35.399 0 146 62 4 0 0 0 0.010239 1 15136 48.981 43.499 1 1.0117 0.81662 0 2989300 1530500 1458800 2763 2090 1014 1044 4349 4349 AQEFLQHR 8 0 1 Unmodified _AQEFLQHR_ 0 0 0 Q9H981;H0Y849 Q9H981 Q9H981 ACTR8 Actin-related protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.7669 2 514.76724 1027.51993 86991.9 0.68404 0.00035212 0.33372 0.00017179 1.0178 0.00052391 514.766980698933 519.77188150031 22.82 0.31801 22.82 22.646 22.964 0 60 17 5 0 0 0 0.0083247 1 8806 79.116 70.343 1 0.83605 0.84364 0 9530400 5761300 3769100 2764 2044 1015 1045 4350 4350 AQEGGGSEVFQELK 14 1 0 Unmodified _AQEGGGSEVFQELK_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;Q05CT2;B3KTW4 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.8593 2 739.85972 1477.70489 71053.71 0.52892 0.00039133 -1.2474 -0.00092293 -0.71853 -0.00053161 739.8591741424 743.866511858098 69.56 0.51109 69.56 69.304 69.815 0 217 42 9 0 0 0 3.9792E-06 2 40342 100.93 100.93 1 1.3838 1.5375 0 59997000 26731000 33266000 2765 1324 1016 1046 4351;4352 4352 AQEGGGSEVFQELK 14 1 0 Unmodified _AQEGGGSEVFQELK_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;Q05CT2;B3KTW4 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.8661 2 739.85972 1477.70489 71078.26 0.55158 0.00040809 -0.45909 -0.00033967 0.092486 6.8427E-05 739.859444506572 743.866167576537 79.951 0.46507 79.951 79.717 80.182 0 148 27 8 0 0 0 0.0035958 2 43084 46.88 37.192 1 1.2875 1.0323 0 8290300 3648200 4642200 2766 1324 1016 1046 4353;4354 4353 AQEGGGSEVFQELK 14 1 0 Unmodified _AQEGGGSEVFQELK_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;Q05CT2;B3KTW4 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.8596 2 739.85972 1477.70489 71465.91 0.5867 0.00043408 -0.56168 -0.00041556 0.025025 1.8515E-05 739.859321224896 743.86592199005 80.204 0.50665 80.204 79.949 80.456 0 136 28 8 0 0 0 0.00024123 2 42413 63.473 63.473 1 1.2551 1.0214 0 7176100 3295700 3880400 2767 1324 1016 1046 4355;4356 4356 AQEGPDAEIIGGER 14 0 1 Unmodified _AQEGPDAEIIGGER_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.3546 2 721.34952 1440.68449 71593.83 0.31336 0.00022604 0.098912 7.135E-05 0.41227 0.00029739 721.349632489172 726.353654074377 53.022 0.60581 53.022 52.737 53.343 0 197 45 7 0 0 0 8.1988E-10 2 29557 122.33 122.33 1 1.3168 1.3471 0 33773000 14342000 19431000 2768 1392 1017 1047 4357;4358 4358 AQEGPDAEIIGGER 14 0 1 Unmodified _AQEGPDAEIIGGER_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.3489 2 721.34952 1440.68449 72204.63 0.52181 0.00037641 -0.68024 -0.00049069 -0.15843 -0.00011428 721.349486857321 726.353354855571 51.814 0.74815 51.814 51.543 52.291 0 248 59 6 0 0 0 6.5956E-05 2 29340 90.653 86.499 1 1.2308 1.3427 0 29714000 12778000 16937000 2769 1392 1017 1047 4359;4360 4359 AQEIDGQALLLLK 13 1 0 Unmodified _AQEIDGQALLLLK_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;P78365;H7C528;A5YM43;Q8NDX5 B3KPJ4;A5YM43 B3KPJ4 PHC2;HPH2;PHC3 Polyhomeotic-like protein 2;Polyhomeotic-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.92 2 706.411391 1410.80823 74031.46 0.68733 0.00048554 -0.47005 -0.00033205 0.21727 0.00015348 706.411395495536 710.417732240143 109.52 0.56029 109.52 109.26 109.82 0 184 42 6 0 0 0 1.2288E-08 2 68499 112.75 104.05 1 1.2427 1.3413 0 34648000 11902000 22745000 2770 479;677 1018 1048 4361;4362 4361 AQEIDGQALLLLK 13 1 0 Unmodified _AQEIDGQALLLLK_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;P78365;H7C528;A5YM43;Q8NDX5 B3KPJ4;A5YM43 B3KPJ4 PHC2;HPH2;PHC3 Polyhomeotic-like protein 2;Polyhomeotic-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.4187 2 706.411391 1410.80823 72358.63 0.8341 0.00058922 -0.36783 -0.00025984 0.46627 0.00032938 706.411391332486 710.417988984061 108.94 0.51112 108.94 108.66 109.17 0 181 38 6 0 0 0 3.6292E-09 2 69710 121.6 111.32 1 1.2517 1.3353 0 20917000 9416800 11501000 2771 479;677 1018 1048 4363;4364 4363 AQEIDGQALLLLK 13 1 0 Unmodified _AQEIDGQALLLLK_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;P78365;H7C528;A5YM43;Q8NDX5 B3KPJ4;A5YM43 B3KPJ4 PHC2;HPH2;PHC3 Polyhomeotic-like protein 2;Polyhomeotic-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.4182 2 706.411391 1410.80823 72504.75 0.83363 0.00058888 -0.13474 -9.5183E-05 0.69888 0.0004937 706.411212707121 710.418301196946 120.91 0.423 120.91 120.68 121.1 -7.6294E-06 113 20 10 0 0 0 5.1868E-19 2 71869 146.11 133.15 1 1.7948 1.4084 0 16897000 5903200 10994000 2772 479;677 1018 1048 4365;4366 4365 AQEIDGQALLLLK 13 1 0 Unmodified _AQEIDGQALLLLK_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;P78365;H7C528;A5YM43;Q8NDX5 B3KPJ4;A5YM43 B3KPJ4 PHC2;HPH2;PHC3 Polyhomeotic-like protein 2;Polyhomeotic-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.4191 2 706.411391 1410.80823 73044.05 0.77952 0.00055066 0.010461 7.3898E-06 0.78998 0.00055805 706.411087303105 710.418451827568 120.67 0.49207 120.67 120.47 120.96 0 130 24 8 0 0 0 0.00036193 2 70779 62.633 58.117 1 1.9822 1.593 0 17021000 5052100 11968000 2773 479;677 1018 1048 4367;4368 4367 AQELGHSQSALASAQR 16 0 1 Unmodified _AQELGHSQSALASAQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.4186 2 827.418799 1652.82305 67714.64 0.56642 0.00046867 -0.21864 -0.00018091 0.34778 0.00028776 827.418493555872 832.422730815983 25.252 0.23845 25.252 25.113 25.352 0 46 10 6 0 0 0 7.4336E-34 2 10832 157.35 141.98 1 0.71727 0.75214 0 11014000 6424600 4589000 2774 186;1747 1019 1049 4369;4370 4369 AQELGHSQSALASAQR 16 0 1 Unmodified _AQELGHSQSALASAQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.2844 3 551.948292 1652.82305 80638.66 0.40921 0.00022586 -0.078315 -4.3226E-05 0.3309 0.00018264 551.94820112392 555.284235421037 25.214 0.36314 25.214 25.07 25.433 0 77 16 7 0 0 0 1.5114E-25 2 10885 122.31 116.04 1 0.88095 0.94001 0 44225000 23440000 20785000 2775 186;1747 1019 1049 4371;4372 4372 AQELGHSQSALASAQR 16 0 1 Unmodified _AQELGHSQSALASAQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.9207 2 827.418799 1652.82305 67772.93 0.53857 0.00044563 -0.013015 -1.0769E-05 0.52556 0.00043486 827.418840880061 832.422739677988 25 0.20434 25 24.857 25.062 0 39 7 7 0 0 0 1.3334E-17 2 10626 131.66 120.45 1 0.78684 0.85958 0 30197000 17412000 12785000 2776 186;1747 1019 1049 4373;4374 4374 AQELGHSQSALASAQR 16 0 1 Unmodified _AQELGHSQSALASAQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.2843 3 551.948292 1652.82305 80079.05 0.33311 0.00018386 0.11291 6.2321E-05 0.44602 0.00024618 551.948214925317 555.284211225172 24.984 0.32811 24.984 24.857 25.185 0 73 12 9 0 0 0 6.1743E-45 2 10639 141 131.22 1 1.0014 1.1627 0 58969000 33462000 25508000 2777 186;1747 1019 1049 4375;4376 4375 AQELGHSQSALASAQR 16 0 1 Unmodified _AQELGHSQSALASAQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.285 3 551.948292 1652.82305 80550.55 0.29256 0.00016148 0.031635 1.7461E-05 0.3242 0.00017894 551.948296236617 555.28439275925 28.717 0.44652 28.717 28.503 28.949 0 209 31 10 0 0 0 2.4934E-07 2 11500 82.349 82.349 1 1.3955 1.1407 0 13885000 5401500 8483000 2778 186;1747 1019 1049 4377;4378 4377 AQELGHSQSALASAQR 16 0 1 Unmodified _AQELGHSQSALASAQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.2844 3 551.948292 1652.82305 80304.95 0.18381 0.00010146 0.4616 0.00025478 0.64541 0.00035623 551.948500457457 555.284611781585 28.936 0.38367 28.936 28.786 29.17 0 141 21 10 0 0 0 4.7063E-07 2 11123 88.319 85.845 1 1.5316 1.2696 0 15072000 5884100 9188400 2779 186;1747 1019 1049 4379;4380 4379 AQELGHSQSALASAQR 16 0 1 Unmodified _AQELGHSQSALASAQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.4181 2 827.418799 1652.82305 67376.46 0.33213 0.00027481 0.20824 0.0001723 0.54038 0.00044712 827.418795748082 832.423110503065 28.944 0.34119 28.944 28.786 29.128 0 97 18 8 0 0 0 0.042955 1 11147 23.362 23.362 1 1.48 1.2783 0 4372200 1828900 2543300 2780 186;1747 1019 1049 4381 4381 AQELIQATNQILSHR 15 0 1 Unmodified _AQELIQATNQILSHR_ 0 0 0 A0A024QZH6;Q9H7N4 A0A024QZH6 A0A024QZH6 SR-A1;SCAF1 Splicing factor, arginine/serine-rich 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.9846 3 574.647953 1720.92203 79910.59 0.48372 0.00027797 0.46929 0.00026968 0.95301 0.00054765 574.647596328493 577.984866466167 82.74 0.47481 82.74 82.525 83 7.6294E-06 96 37 5 0 0 0 0.0008158 1 50663 44.312 44.312 1 1.1171 1.1023 0 12872000 4457600 8414100 2781 22 1020 1050 4382 4382 AQEPESGLSEETQVK 15 1 0 Unmodified _AQEPESGLSEETQVK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.894 2 816.391581 1630.76861 66602.23 0.88983 0.00072645 -0.053774 -4.3901E-05 0.83606 0.00068255 816.391397138717 820.398600733282 41.627 0.84474 41.627 41.253 42.098 0 409 69 10 0 0 0 5.5264E-07 2 21804 101.39 101.39 1 0.71026 0.79888 0 71497000 39625000 31872000 2782 1665 1021 1051 4383;4384 4384 AQEPESGLSEETQVK 15 1 0 Unmodified _AQEPESGLSEETQVK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.3919 2 816.391581 1630.76861 67167.2 0.75653 0.00061762 0.22762 0.00018583 0.98415 0.00080345 816.391604271796 820.398951236966 40.762 0.61349 40.762 40.484 41.098 0 290 45 9 0 0 0 1.088E-30 3 21814 158.34 151.68 1 0.75253 0.84074 0 88954000 52654000 36300000 2783 1665 1021 1051 4385;4386;4387 4387 AQEPESGLSEETQVK 15 1 0 Unmodified _AQEPESGLSEETQVK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.3984 2 816.391581 1630.76861 67136.16 0.46745 0.00038162 0.45252 0.00036943 0.91997 0.00075105 816.391696710576 820.399546093 48.754 0.87652 48.754 48.342 49.218 0 395 69 9 0 0 0 0.0020323 1 23664 46.069 46.069 1 0.38603 0.30764 0 19786000 13849000 5936500 2784 1665 1021 1051 4388 4388 AQEPESGLSEETQVK 15 1 0 Unmodified _AQEPESGLSEETQVK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.3994 2 816.391581 1630.76861 67568.46 0.36544 0.00029834 0.43279 0.00035332 0.79823 0.00065167 816.391720607743 820.399578345976 49.227 0.91656 49.227 48.797 49.714 0 408 68 8 0 0 0 0.024922 1 23577 29.341 29.341 1 0.40125 0.32232 0 15595000 10929000 4666200 2785 1665 1021 1051 4389 4389 AQETGHLVMDVR 12 0 1 Oxidation (M) _AQETGHLVM(ox)DVR_ AQETGHLVM(1)DVR AQETGHLVM(45.91)DVR 0 1 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;H0YDQ3;H0YE95;H0YDG6 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3389 2 686.337901 1370.66125 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.17 1 27.17 26.67 27.67 0 0 0 0 0.01366 1 12498 45.911 32.533 1 2786 640 1022 1052 4390 4390 496 AQEVAELK 8 1 0 Unmodified _AQEVAELK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.2452 2 444.245275 886.475997 90347.41 -0.23952 -0.00010641 0.21467 9.5367E-05 -0.024848 -1.1039E-05 444.245404017289 448.252299130943 27.057 0.43195 27.057 26.863 27.295 1.9073E-06 86 22 6 0 0 0 0.026101 1 12353 54.776 30.145 1 0.99358 1.0685 0 40130000 18847000 21283000 2787 1898 1023 1053 4391 4391 AQEVAELK 8 1 0 Unmodified _AQEVAELK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.2521 2 444.245275 886.475997 91121.74 -0.1184 -5.26E-05 0.20092 8.9257E-05 0.082513 3.6656E-05 444.24532806734 448.252350996008 30.094 0.48268 30.094 29.867 30.349 0 125 32 6 0 0 0 0.049834 1 12407 43.808 19.176 1 1.2867 0.99905 0 3448400 1527300 1921200 2788 1898 1023 1053 4392 4392 AQEYDSSFPNWEFAR 15 0 1 Unmodified _AQEYDSSFPNWEFAR_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 928.9079 2 923.90519 1845.79583 63842.27 0.61526 0.00056844 -0.25924 -0.00023951 0.35602 0.00032893 924.406301915457 928.909085578769 102.52 0.75339 102.52 102.09 102.84 0 317 62 6 0 0 0 0.00022652 2 62941 73.848 50.969 1 0.76793 0.78788 0 25795000 15140000 10655000 2789 626 1024 1054 4393;4394 4394 AQEYDSSFPNWEFAR 15 0 1 Unmodified _AQEYDSSFPNWEFAR_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 923.9051 2 923.90519 1845.79583 63555.56 0.38351 0.00035432 -0.6659 -0.00061523 -0.28239 -0.00026091 924.406568696554 928.909114885235 101.8 0.802 101.8 101.34 102.14 0 334 62 7 0 0 0 4.3722E-07 2 63967 103.75 80.525 1 0.74414 0.80562 0 27306000 15855000 11451000 2790 626 1024 1054 4395;4396 4395 AQEYDSSFPNWEFAR 15 0 1 Unmodified _AQEYDSSFPNWEFAR_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 923.9058 2 923.90519 1845.79583 63968.07 0.97825 0.00090381 -1.0122 -0.00093519 -0.033965 -3.138E-05 924.406872720466 929.409239894967 114.27 0.63528 114.27 113.96 114.59 0 103 27 6 0 0 0 0.0002205 1 66753 62.14 38.914 1 1.0114 0.8534 0 4758800 2227400 2531400 2791 626 1024 1054 4397 4397 AQEYDSSFPNWEFAR 15 0 1 Unmodified _AQEYDSSFPNWEFAR_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 923.9049 2 923.90519 1845.79583 63447.72 0.54906 0.00050728 -0.38467 -0.0003554 0.16439 0.00015188 924.406492207673 928.908452725855 114.16 0.7385 114.16 113.91 114.64 0 133 30 8 0 0 0 0.024018 1 65701 29.689 24.195 1 1.0848 0.95679 0 4104800 1802800 2302000 2792 626 1024 1054 4398 4398 AQFAQPEILIGTIPGAGGTQR 21 0 1 Unmodified _AQFAQPEILIGTIPGAGGTQR_ 0 0 0 P30084 P30084 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1068.0778 2 1063.07365 2124.13275 NaN NaN NaN -0.31855 -0.00033864 NaN NaN NaN NaN 115.14 0.34074 115.14 114.96 115.3 0 0 0 0 7.8093E-06 1 73178 56.482 43.281 1 NaN NaN 0 4331000 0 4331000 2793 1533 1025 1055 4399 4399 AQFAQPEILIGTIPGAGGTQR 21 0 1 Unmodified _AQFAQPEILIGTIPGAGGTQR_ 0 0 0 P30084 P30084 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1069.0812 2 1063.07365 2124.13275 NaN NaN NaN -0.12647 -0.00013445 NaN NaN NaN NaN 114.63 0.31989 114.63 114.48 114.8 0 0 0 0 0.0068503 1 74572 39.005 31.46 1 NaN NaN 0 5254300 0 5254300 2794 1533 1025 1055 4400 4400 AQFEGIVTDLIR 12 0 1 Unmodified _AQFEGIVTDLIR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52;H0YBG6 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3749 2 681.374809 1360.73507 72836.99 0.76173 0.00051903 0.064129 4.3696E-05 0.82586 0.00056272 681.374654417136 686.378924438421 116.29 1.0059 116.29 115.79 116.79 0 322 64 9 0 0 0 1.174E-05 2 74088 107.24 96.08 1 2.111 2.4007 0 112660000 38435000 74227000 2795 1092 1026 1056 4401;4402 4402 AQFEGIVTDLIR 12 0 1 Unmodified _AQFEGIVTDLIR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52;H0YBG6 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3748 2 681.374809 1360.73507 73040.03 0.89229 0.00060798 0.035946 2.4493E-05 0.92824 0.00063248 681.374706077183 686.378907294941 115.69 0.83664 115.69 115.33 116.17 0 311 54 8 0 0 0 2.5742E-05 2 75414 100.72 93.443 1 2.0665 2.3498 0 120380000 36453000 83924000 2796 1092 1026 1056 4403;4404 4404 AQFEGIVTDLIR 12 0 1 Unmodified _AQFEGIVTDLIR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52;H0YBG6 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.3751 2 681.374809 1360.73507 74675.27 1.13 0.00076998 -0.12855 -8.7587E-05 1.0015 0.00068239 681.374556646754 686.37878210174 128.23 0.81141 128.23 127.91 128.72 0 162 33 8 0 0 0 0.00012005 2 77410 94.616 81.263 1 1.2772 1.0656 0 23162000 9850300 13312000 2797 1092 1026 1056 4405;4406 4406 AQFEGIVTDLIR 12 0 1 Unmodified _AQFEGIVTDLIR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52;H0YBG6 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.3795 2 681.374809 1360.73507 73334.76 0.81466 0.00055509 -0.07585 -5.1683E-05 0.73881 0.00050341 681.374141315211 686.378916130226 127.97 0.93147 127.97 127.68 128.61 -7.6294E-06 172 38 8 0 0 0 0.004034 2 76364 65.5 51.731 1 1.158 1.0101 0 29293000 14494000 14799000 2798 1092 1026 1056 4407;4408 4408 AQFEQLK 7 1 0 Unmodified _AQFEQLK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.2413 2 432.23471 862.454868 92762.7 0.4508 0.00019485 -0.05457 -2.3587E-05 0.39623 0.00017127 432.235154325217 436.241473541555 31.607 0.46593 31.607 31.295 31.761 0 133 41 5 0 0 0 0.014426 1 15647 100.07 37.349 1 1.859 2.083 0 80769000 28985000 51784000 2799 1754 1027 1057 4409 4409 AQFLVEK 7 1 0 Unmodified _AQFLVEK_ 0 0 0 J3KPX7;Q99623;F5GY37;F5GWA7 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.7471 2 417.739628 833.464704 93353.86 0.3755 0.00015686 0.67337 0.00028129 1.0489 0.00043815 417.739601785716 421.74695039449 42.855 1.0283 42.855 42.437 43.465 0 387 85 6 0 0 0 0.013473 1 23071 102.71 48.188 1 1.5365 1.7843 0 226740000 95263000 131480000 2800 1328 1028 1058 4410 4410 AQHEDQVEQYK 11 1 0 Unmodified _AQHEDQVEQYK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.8181 2 687.817855 1373.62116 73319.34 0.39564 0.00027213 -0.1234 -8.488E-05 0.27224 0.00018725 687.817716202267 691.824842351121 17.44 0.57325 17.44 17.266 17.84 0 113 20 9 0 0 0 1.399E-65 1 4575 238.86 238.86 1 1.2246 1.3796 0 125070000 52503000 72570000 2801 1440 1029 1059 4411 4411 AQHEDQVEQYK 11 1 0 Unmodified _AQHEDQVEQYK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.8812 3 458.880996 1373.62116 88749.21 0.048797 2.2392E-05 -0.31628 -0.00014514 -0.26749 -0.00012274 458.881034961774 461.552106899267 17.434 0.7283 17.434 17.111 17.84 0 152 24 11 0 0 0 1.2166E-05 1 4576 99.752 99.752 1 1.2268 1.3962 0 168730000 74930000 93800000 2802 1440 1029 1059 4412 4412 AQHEDQVEQYK 11 1 0 Unmodified _AQHEDQVEQYK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.8177 2 687.817855 1373.62116 73215.48 0.32661 0.00022465 -0.27465 -0.00018891 0.051953 3.5734E-05 687.817800397754 691.824681602666 17.307 0.49892 17.307 17.014 17.513 0 63 15 8 0 0 0 1.1166E-17 2 4267 183.33 173.05 1 1.2938 1.3148 0 30113000 13202000 16911000 2803 1440 1029 1059 4413;4414 4414 AQHEDQVEQYK 11 1 0 Unmodified _AQHEDQVEQYK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.5526 3 458.880996 1373.62116 89126.12 -0.052217 -2.3962E-05 -0.09252 -4.2456E-05 -0.14474 -6.6417E-05 458.881002174261 461.552226587359 17.307 0.59447 17.307 16.985 17.579 0 46 19 5 0 0 0 0.00048023 2 4279 58.132 54.811 1 1.2206 1.265 0 24798000 11169000 13629000 2804 1440 1029 1059 4415;4416 4415 AQHEDQVEQYK 11 1 0 Unmodified _AQHEDQVEQYK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.5525 3 458.880996 1373.62116 88196.54 -0.12498 -5.7349E-05 0.25362 0.00011638 0.12865 5.9034E-05 458.881105734685 461.552437700756 18.68 0.2558 18.68 18.543 18.799 0 61 9 9 0 0 0 0.01117 1 4608 28.624 25.303 1 1.2501 0.98881 0 6181800 2539700 3642100 2805 1440 1029 1059 4417 4417 AQHEDQVEQYK 11 1 0 Unmodified _AQHEDQVEQYK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.8185 2 687.817855 1373.62116 73147.06 0.11382 7.8289E-05 0.6462 0.00044446 0.76002 0.00052275 687.818221164191 691.825353261043 18.673 0.3238 18.673 18.502 18.826 0 57 12 9 0 0 0 4.6022E-06 1 4624 127.87 116.27 1 1.3182 1.0504 0 6777600 2771300 4006300 2806 1440 1029 1059 4418 4418 AQHQLGEFK 9 1 0 Unmodified _AQHQLGEFK_ 0 0 0 Q8N1F7;A8K897;H3BVG0;H3BPA9 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.2823 2 529.274898 1056.53524 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.016 1 24.016 23.516 24.516 0 0 0 0 0.0023407 1 9813 85.676 65.679 1 2807 1904 1030 1060 4419 4419 AQHQQALSSLELLNVLFR 18 0 1 Unmodified _AQHQQALSSLELLNVLFR_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3873 3 689.716367 2066.12727 72437.09 0.91392 0.00063035 -0.080731 -5.5682E-05 0.83319 0.00057466 689.716352610302 693.052430102672 133.24 0.22641 133.24 133.13 133.35 0 35 6 11 0 0 0 1.6425E-30 2 87203 144.3 144.3 1 0.90623 1.0307 0 112990000 60228000 52762000 2808 1997 1031 1061 4420;4421 4421 AQHQQALSSLELLNVLFR 18 0 1 Unmodified _AQHQQALSSLELLNVLFR_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.0515 3 689.716367 2066.12727 73301.23 0.89935 0.0006203 0.39103 0.0002697 1.2904 0.00089 690.050922078722 693.052694441907 133.21 0.19466 133.21 133.11 133.3 0 37 5 11 0 0 0 2.4382E-40 3 89400 160.43 160.43 1 0.87485 1.0027 0 174700000 93004000 81701000 2809 1997 1031 1061 4422;4423;4424 4423 AQHSENDLEEVGK 13 1 0 Unmodified _AQHSENDLEEVGK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.3464 2 728.339152 1454.66375 NaN NaN NaN 0.17312 0.00012609 NaN NaN NaN NaN 23.492 0.41401 23.492 23.336 23.75 0 0 0 0 3.2891E-09 1 9290 113.99 103.46 1 NaN NaN 0 22709000 0 22709000 2810 897 1032 1062 4425 4425 AQHSENDLEEVGK 13 1 0 Unmodified _AQHSENDLEEVGK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.3453 2 728.339152 1454.66375 71176.23 0.36245 0.00026399 0.055135 4.0157E-05 0.41759 0.00030414 728.338904345962 732.34632107226 23.073 0.47937 23.073 22.884 23.363 0 91 19 9 0 0 0 1.6026E-74 2 8940 218.06 197.36 1 0.79744 0.89685 0 72111000 35928000 36182000 2811 897 1032 1062 4426;4427 4426 AQHSENDLEEVGK 13 1 0 Unmodified _AQHSENDLEEVGK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.8955 3 485.895193 1454.66375 85240.39 0.067701 3.2896E-05 0.32681 0.00015879 0.39451 0.00019169 485.895126621751 488.566631755355 23.07 0.77552 23.07 22.563 23.339 0 126 33 10 0 0 0 2.475E-09 2 9007 99.991 97.124 1 0.98966 1.1104 0 114660000 57842000 56816000 2812 897 1032 1062 4428;4429 4429 AQHSENDLEEVGK 13 1 0 Unmodified _AQHSENDLEEVGK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.3466 2 728.339152 1454.66375 72369.3 0.44438 0.00032366 0.070872 5.1619E-05 0.51525 0.00037528 728.840570753369 732.346104082063 25.894 0.30221 25.894 25.718 26.02 0 58 12 6 0 0 0 0.039184 1 9559 31.597 27.298 1 1.188 0.9265 0 3293200 1338900 1954300 2813 897 1032 1062 4430 4430 AQHSENDLEEVGK 13 1 0 Unmodified _AQHSENDLEEVGK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.8951 3 485.895193 1454.66375 86398.71 -0.0095402 -4.6355E-06 0.21652 0.0001052 0.20698 0.00010057 485.895268296266 488.566729568567 25.886 0.61542 25.886 25.498 26.114 0 96 24 8 0 0 0 0.050832 1 9660 13.62 13.263 1 1.0643 0.85297 0 7416000 3194500 4221600 2814 897 1032 1062 4431 4431 AQHSENDLEEVGK 13 1 0 Unmodified _AQHSENDLEEVGK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.3392 2 728.339152 1454.66375 72494.63 0.57543 0.00041911 -0.011479 -8.3606E-06 0.56395 0.00041074 728.339222702701 732.346372153974 25.902 0.34048 25.902 25.713 26.053 0 74 13 8 0 0 0 0.0095969 2 9096 42.629 38.612 1 1.1192 0.90963 0 2931500 1410400 1521000 2815 897 1032 1062 4432;4433 4433 AQIAGYLYGVSPPDNPQVK 19 1 0 Unmodified _AQIAGYLYGVSPPDNPQVK_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1009.5216 2 1009.0231 2016.03164 60933.05 0.49041 0.00049484 0.31749 0.00032036 0.80791 0.0008152 1009.52435300498 1013.53180089246 97.484 0.58733 97.484 97.211 97.798 0 268 50 8 0 0 0 5.745E-05 1 59336 62.14 62.14 1 0.91576 0.99417 0 46065000 23967000 22098000 2816 1854 1033 1063 4434 4434 AQIAGYLYGVSPPDNPQVK 19 1 0 Unmodified _AQIAGYLYGVSPPDNPQVK_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1009.0237 2 1009.0231 2016.03164 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.246 1 97.246 96.746 97.746 -7.6294E-06 0 0 0 2.6336E-05 1 59310 69.602 55.04 1 2817 1854 1033 1063 4435 4435 AQIAGYLYGVSPPDNPQVK 19 1 0 Unmodified _AQIAGYLYGVSPPDNPQVK_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1013.5312 2 1009.0231 2016.03164 60434.83 0.72018 0.00072668 -0.34307 -0.00034617 0.37711 0.00038051 1009.52418253654 1013.03015214994 96.842 0.61773 96.842 96.558 97.176 7.6294E-06 293 49 8 0 0 0 3.4807E-17 4 60378 122.64 122.64 1 0.88549 0.97748 0 44213000 23306000 20907000 2818 1854 1033 1063 4436;4437;4438;4439 4439 AQIAGYLYGVSPPDNPQVK 19 1 0 Unmodified _AQIAGYLYGVSPPDNPQVK_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1013.537 2 1009.0231 2016.03164 60200.09 0.48656 0.00049095 0.28571 0.00028829 0.77227 0.00077923 1009.52556133354 1013.53172561683 110.49 0.55121 110.49 110.24 110.79 7.6294E-06 161 26 8 0 0 0 2.5973E-05 2 63750 71.513 71.513 1 0.95016 0.73754 0 12755000 5405600 7349300 2819 1854 1033 1063 4440;4441 4440 AQIAGYLYGVSPPDNPQVK 19 1 0 Unmodified _AQIAGYLYGVSPPDNPQVK_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1009.0231 2 1009.0231 2016.03164 60295.54 0.39241 0.00039595 0.15566 0.00015706 0.54807 0.00055301 1009.52561179208 1013.03003156873 110.4 0.56116 110.4 110.08 110.64 0 183 29 8 0 0 0 3.8568E-05 3 62908 69.716 69.716 1 1.0165 0.83522 0 9616600 4842100 4774500 2820 1854 1033 1063 4442;4443;4444 4444 AQIDPVLLK 9 1 0 Unmodified _AQIDPVLLK_ 0 0 0 Q96T23;H0YER1;H0YCN2;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.8084 2 498.808042 995.601532 87160.05 0.41683 0.00020792 0.020965 1.0457E-05 0.4378 0.00021838 498.807954258533 502.815065701881 79.03 0.65144 79.03 78.619 79.271 0 197 59 4 0 0 0 0.018672 2 46685 51.854 40.343 1 0.45994 0.49502 0 33239000 20648000 12591000 2821 1991 1034 1064 4445;4446 4445 AQIFANTVDNAR 12 0 1 Unmodified _AQIFANTVDNAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.3396 2 660.338758 1318.66296 72811.95 0.87154 0.00057551 0.19176 0.00012663 1.0633 0.00070214 660.339126046805 665.343267061883 54.351 0.92248 54.351 53.921 54.844 0 480 79 8 0 0 0 3.6427E-23 5 30462 187.5 165.27 1 1.1332 1.3447 0 708490000 326020000 382460000 2822 316 1035 1065 4447;4448;4449;4450;4451 4449 AQIFANTVDNAR 12 0 1 Unmodified _AQIFANTVDNAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.339 2 660.338758 1318.66296 74147.05 0.19078 0.00012598 -0.0073014 -4.8214E-06 0.18347 0.00012116 660.338961786826 665.343025092936 53.241 1.222 53.241 52.67 53.892 3.8147E-06 728 110 9 0 0 0 1.2412E-12 4 30255 162.64 143.66 1 1.1243 1.3081 0 409770000 195390000 214380000 2823 316 1035 1065 4452;4453;4454;4455 4453 AQIFANTVDNAR 12 0 1 Unmodified _AQIFANTVDNAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.343 2 660.338758 1318.66296 74413.21 0.38738 0.0002558 -0.22703 -0.00014991 0.16036 0.00010589 660.33872623799 665.342960869085 63.059 1.4366 63.059 62.279 63.716 0 636 124 8 0 0 0 2.3371E-08 3 32543 120.09 92.976 1 1.6497 1.4196 0 52025000 21424000 30601000 2824 316 1035 1065 4456;4457;4458 4458 AQIFANTVDNAR 12 0 1 Unmodified _AQIFANTVDNAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.3432 2 660.338758 1318.66296 73545.51 0.35652 0.00023542 -0.26193 -0.00017296 0.094587 6.246E-05 660.338748284158 665.342920123912 63.534 1.3617 63.534 62.972 64.334 -3.8147E-06 644 120 8 0 0 0 7.0704E-06 4 31781 109.42 91.555 1 1.6562 1.4449 0 47139000 16994000 30144000 2825 316 1035 1065 4459;4460;4461;4462 4460 AQIHDLVLVGGSTR 14 0 1 Unmodified _AQIHDLVLVGGSTR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.6121 3 489.275568 1464.80488 85432.66 0.081473 3.9863E-05 0.28131 0.00013764 0.36278 0.0001775 489.275684522616 492.611706513182 68.397 1.3744 68.397 67.759 69.133 0 542 90 8 0 0 0 0.00031721 2 39589 56.599 56.599 1 0.8219 0.94099 0 130590000 70880000 59709000 2826 533 1036 1066 4463;4464 4464 AQIHDLVLVGGSTR 14 0 1 Unmodified _AQIHDLVLVGGSTR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.4108 2 733.409714 1464.80488 NaN NaN NaN 0.4428 0.00032475 NaN NaN NaN NaN 68.49 0.57974 68.49 68.233 68.812 0 0 0 0 0.014725 1 39617 59.607 35.858 1 NaN NaN 0 9936700 9936700 0 2827 533 1036 1066 4465 4465 AQIHDLVLVGGSTR 14 0 1 Unmodified _AQIHDLVLVGGSTR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.415 2 733.409714 1464.80488 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.33 1 68.33 67.83 68.83 0 0 0 0 0.0014892 1 39593 72.496 55.47 1 2828 533 1036 1066 4466 4466 AQIHDLVLVGGSTR 14 0 1 Unmodified _AQIHDLVLVGGSTR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.2754 3 489.275568 1464.80488 85618 0.36271 0.00017747 -0.19783 -9.6794E-05 0.16488 8.0673E-05 489.275385372457 492.611561375811 66.628 1.1629 66.628 66.223 67.386 0 528 78 10 0 0 0 0.0016694 2 39245 43.791 43.791 1 0.7834 0.90108 0 205920000 108950000 96968000 2829 533 1036 1066 4467;4468 4467 AQIHDLVLVGGSTR 14 0 1 Unmodified _AQIHDLVLVGGSTR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.4106 2 733.409714 1464.80488 72338.97 0.71272 0.00052272 -0.098241 -7.2051E-05 0.61448 0.00045067 733.409659926162 738.413668686893 66.632 0.51501 66.632 66.388 66.903 0 191 42 6 0 0 0 0.00020006 1 39299 79.633 79.633 1 0.77733 0.8509 0 32968000 18994000 13974000 2830 533 1036 1066 4469 4469 AQIHDLVLVGGSTR 14 0 1 Unmodified _AQIHDLVLVGGSTR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.2757 3 489.275568 1464.80488 85954.52 0.082616 4.0422E-05 0.3425 0.00016758 0.42512 0.000208 489.275626354421 492.611662117317 77.587 0.74403 77.587 77.251 77.995 -7.6294E-06 285 46 8 0 0 0 0.0023169 2 41454 40.237 40.237 1 1.0953 0.90945 0 21021000 9809700 11211000 2831 533 1036 1066 4470;4471 4471 AQIHDLVLVGGSTR 14 0 1 Unmodified _AQIHDLVLVGGSTR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 738.4141 2 733.409714 1464.80488 70944.8 0.4871 0.00035724 0.12366 9.0697E-05 0.61076 0.00044794 733.409550231384 738.413788764792 77.56 0.45972 77.56 77.348 77.808 0 144 31 7 0 0 0 0.0002076 2 41557 80.522 80.522 1 0.99663 0.84064 0 4734900 2421600 2313300 2832 533 1036 1066 4472;4473 4473 AQIHDLVLVGGSTR 14 0 1 Unmodified _AQIHDLVLVGGSTR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.6115 3 489.275568 1464.80488 85528.54 0.27956 0.00013678 0.33012 0.00016152 0.60967 0.0002983 489.275552794001 492.611684686899 77.729 0.7646 77.729 77.393 78.157 0 277 45 9 0 0 0 0.014503 2 40661 26.292 26.292 1 1.1128 0.95711 0 21817000 10700000 11117000 2833 533 1036 1066 4474;4475 4474 AQIHDLVLVGGSTR 14 0 1 Unmodified _AQIHDLVLVGGSTR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.415 2 733.409714 1464.80488 72246.57 0.65608 0.00048117 -0.087034 -6.3832E-05 0.56904 0.00041734 733.40942710276 738.413691298922 77.716 0.46544 77.716 77.472 77.937 0 132 29 7 0 0 0 0.00018591 2 40731 76.522 76.522 1 0.94789 0.78914 0 5013500 2434000 2579500 2834 533 1036 1066 4476;4477 4476 AQILVAKPELK 11 2 0 Unmodified _AQILVAKPELK_ 0 0 1 Q14781 Q14781 Q14781 CBX2 Chromobox protein homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 409.2666 3 403.923696 1208.74926 94008.94 0.06636 2.6804E-05 1.0429 0.00042124 1.1092 0.00044804 403.923887419799 409.266944787462 55.679 0.1925 55.679 55.597 55.79 -3.8147E-06 40 13 4 0 0 0 0.015112 1 31346 40.015 30.908 1 0.67216 0.78996 0 13878000 7380000 6498400 2835 1744 1037 1067 4478 4478 AQILVAKPELK 11 2 0 Unmodified _AQILVAKPELK_ 0 0 1 Q14781 Q14781 Q14781 CBX2 Chromobox protein homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.3963 2 605.381906 1208.74926 80134.3 0.56878 0.00034433 0.31982 0.00019361 0.8886 0.00053794 605.381815588022 613.396230309399 55.687 0.17751 55.687 55.612 55.79 3.8147E-06 26 12 5 0 0 0 0.019716 1 31348 59.426 44.275 1 0.83516 0.95188 0 7859400 3786400 4073000 2836 1744 1037 1067 4479 4479 AQINIR 6 0 1 Unmodified _AQINIR_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.7163 2 357.716488 713.418422 100095.4 0.028604 1.0232E-05 0.010336 3.6975E-06 0.038941 1.393E-05 357.716407258124 362.720554194403 27.828 0.33263 27.828 27.657 27.99 0 89 20 6 0 0 0 0.035918 1 12945 118.18 28.406 1 0.81032 0.90124 0 76042000 44297000 31745000 2837 1803 1038 1068 4480 4480 AQINIR 6 0 1 Unmodified _AQINIR_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 357.7163 2 357.716488 713.418422 100299.9 -0.016785 -6.0044E-06 -0.063387 -2.2675E-05 -0.080173 -2.8679E-05 357.71634926645 362.720491776603 27.423 0.28518 27.423 27.239 27.524 1.9073E-06 49 14 5 0 0 0 0.035918 1 12693 118.18 28.406 1 0.6907 0.75671 0 31422000 19554000 11868000 2838 1803 1038 1068 4481 4481 AQIQQFHSQIAAQTSASVLAEELHK 25 1 0 Unmodified _AQIQQFHSQIAAQTSASVLAEELHK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.1104 4 684.608237 2734.40384 70713.32 0.63504 0.00043476 -0.10404 -7.1223E-05 0.53101 0.00036353 684.858879789149 686.862855339215 104.84 0.72436 104.84 104.35 105.08 0 205 27 11 0 0 0 0.0065282 1 59725 24.2 24.2 1 0.52307 0.41839 0 8804900 6139100 2665700 2839 197 1039 1069 4482 4482 AQIWDTAGQER 11 0 1 Unmodified _AQIWDTAGQER_ 0 0 0 H3BMH2;H3BSC1;A0A024R5Z8;B4DMN1;P62491;Q15907 H3BMH2 H3BMH2 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.8107 2 637.809833 1273.60511 NaN NaN NaN 1.1829 0.00075446 NaN NaN NaN NaN 48.104 0.066444 48.104 48.071 48.138 0 0 0 0 0.0026408 2 26879 72.643 34.557 1 NaN NaN 0 2661600 2661600 0 2840 194 1040 1070 4483;4484 4484 AQLADSFHLQQFFR 14 0 1 Unmodified _AQLADSFHLQQFFR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.6281 3 569.958239 1706.85289 82277.22 0.5088 0.00028999 0.11972 6.8237E-05 0.62852 0.00035823 569.958281407577 573.294425741632 109.53 0.57381 109.53 109.35 109.92 7.6294E-06 175 44 6 0 0 0 6.7489E-05 1 68597 52.265 50.712 1 1.5902 1.5879 0 16611000 5358600 11252000 2841 523 1041 1071 4485 4485 AQLADSFHLQQFFR 14 0 1 Unmodified _AQLADSFHLQQFFR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.6284 3 569.958239 1706.85289 83194.83 0.71143 0.00040548 -0.0063069 -3.5946E-06 0.70512 0.00040189 569.95827424648 573.628616459633 108.79 0.54822 108.79 108.52 109.07 -7.6294E-06 162 39 6 0 0 0 1.7874E-05 1 69597 76.262 72.044 1 1.7172 1.6946 0 12862000 5636300 7225200 2842 523 1041 1071 4486 4486 AQLADSFHLQQFFR 14 0 1 Unmodified _AQLADSFHLQQFFR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.2943 3 569.958239 1706.85289 NaN NaN NaN 0.15036 8.5698E-05 NaN NaN NaN NaN 120.05 0.48021 120.05 119.79 120.27 0 0 0 0 0.0032481 1 71121 51.546 40.285 1 NaN NaN 0 2492100 0 2492100 2843 523 1041 1071 4487 4487 AQLADSFHLQQFFR 14 0 1 Unmodified _AQLADSFHLQQFFR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.6294 3 569.958239 1706.85289 NaN NaN NaN 0.059935 3.4161E-05 NaN NaN NaN NaN 119.75 0.33906 119.75 119.58 119.92 0 0 0 0 0.0084168 1 70037 41.967 31.332 1 NaN NaN 0 2415600 0 2415600 2844 523 1041 1071 4488 4488 AQLDQTGQHLFCVCGTR 17 0 1 Unmodified _AQLDQTGQHLFCVCGTR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3127 3 664.312248 1989.91491 73070.74 0.45528 0.00030245 -0.0096086 -6.3831E-06 0.44567 0.00029607 664.31245295955 667.648739220698 69.597 0.6791 69.597 69.207 69.886 0 280 57 8 0 0 0 2.9309E-05 1 41518 60.528 56.924 1 0.73612 0.80613 0 32186000 16663000 15523000 2845 1698 1042 1072 4489 4489 AQLDQTGQHLFCVCGTR 17 0 1 Unmodified _AQLDQTGQHLFCVCGTR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.3129 3 664.312248 1989.91491 73845.94 0.51111 0.00033953 -0.22731 -0.000151 0.2838 0.00018853 664.312591037808 667.648534766605 81.103 0.63402 81.103 80.8 81.434 -7.6294E-06 262 40 10 0 0 0 1.927E-06 2 43985 86.455 82.851 1 1.3011 1.1065 0 9094800 3638900 5455900 2846 1698 1042 1072 4490;4491 4491 AQLDQTGQHLFCVCGTR 17 0 1 Unmodified _AQLDQTGQHLFCVCGTR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.6479 3 664.312248 1989.91491 73636.2 0.66611 0.0004425 -0.42156 -0.00028004 0.24455 0.00016246 664.646556050373 667.648417634969 81.252 0.54503 81.252 81.011 81.556 0 200 31 11 0 0 0 3.6356E-05 2 43241 58.159 54.497 1 1.2773 1.055 0 8155200 3654400 4500800 2847 1698 1042 1072 4492;4493 4493 AQLEEEAAAAEERPLVFLCSGCR 23 0 2 Unmodified _AQLEEEAAAAEERPLVFLCSGCR_ 0 0 1 Q9NYP9 Q9NYP9 Q9NYP9 MIS18A Protein Mis18-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.4173 3 869.4161 2605.22647 64452.64 0.74458 0.00064735 -0.34443 -0.00029945 0.40015 0.0003479 869.750426542802 876.089046878373 117.83 0.32495 117.83 117.67 118 0 80 14 9 0 0 0 1.757E-05 1 69497 39.288 39.288 1 0.54911 0.49289 0 3485400 2334800 1150500 2848 2084 1043 1073 4494 4494 AQLEEEAAAAEERPLVFLCSGCR 23 0 2 Unmodified _AQLEEEAAAAEERPLVFLCSGCR_ 0 0 1 Q9NYP9 Q9NYP9 Q9NYP9 MIS18A Protein Mis18-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 876.0885 3 869.4161 2605.22647 66114.65 0.23683 0.0002059 -0.092179 -8.0142E-05 0.14465 0.00012576 869.416235285353 876.421396114092 117.64 0.25303 117.64 117.49 117.75 -7.6294E-06 65 12 7 0 0 0 2.3286E-06 2 68422 48.229 48.229 1 0.73942 0.66856 0 3317900 1719800 1598100 2849 2084 1043 1073 4495;4496 4495 AQLENHEPEEEEEEEMETEEK 21 1 0 Oxidation (M) _AQLENHEPEEEEEEEM(ox)ETEEK_ AQLENHEPEEEEEEEM(1)ETEEK AQLENHEPEEEEEEEM(70.12)ETEEK 0 1 0 A0A024R0H6;Q8N7H5;M0QYC7 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.0206 3 868.685303 2603.03408 66039.77 0.86873 0.00075466 -0.70452 -0.000612 0.16422 0.00014265 869.019157986069 872.02500941163 30.386 0.29105 30.386 30.24 30.531 0 101 24 8 0 0 0 1.9538E-08 3 14832 70.121 70.121 1 1.4347 1.525 0 15848000 7385800 8462500 2850 46 1044 1074 4497;4498;4499 4498 25 AQLENHEPEEEEEEEMETEEK 21 1 0 Oxidation (M) _AQLENHEPEEEEEEEM(ox)ETEEK_ AQLENHEPEEEEEEEM(1)ETEEK AQLENHEPEEEEEEEM(111.45)ETEEK 0 1 0 A0A024R0H6;Q8N7H5;M0QYC7 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.6898 3 868.685303 2603.03408 65921.89 0.81629 0.0007091 -0.3977 -0.00034547 0.41859 0.00036363 868.684904704687 872.024525667573 29.634 0.24827 29.634 29.5 29.748 1.9073E-06 71 19 6 0 0 0 7.9523E-17 3 14272 111.45 111.45 1 1.9852 2.0833 0 19566000 7623300 11943000 2851 46 1044 1074 4500;4501;4502 4500 25 AQLEPVASPAK 11 1 0 Unmodified _AQLEPVASPAK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.8113 2 555.811313 1109.60807 84389.23 0.33308 0.00018513 0.11442 6.3596E-05 0.4475 0.00024872 555.811236815186 559.818401672711 37.667 0.39277 37.667 37.426 37.819 -3.8147E-06 120 30 7 0 0 0 0.0063655 1 19620 54.539 43.179 1 1.6748 1.7284 0 32760000 13365000 19395000 2852 1754 1045 1075 4503 4503 AQLGGPEAAK 10 1 0 Unmodified _AQLGGPEAAK_ 0 0 0 V9HW43;P04792;B4DL87;C9J3N8 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.2561 2 471.256174 940.497795 NaN NaN NaN -0.17833 -8.4038E-05 NaN NaN NaN NaN 20.695 0.28624 20.695 20.534 20.82 0 0 0 0 0.044966 1 7088 48.091 28.455 1 NaN NaN 0 13208000 13208000 0 2853 1443 1046 1076 4504 4504 AQLGLGHSYSR 11 0 1 Unmodified _AQLGLGHSYSR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.811 2 594.809636 1187.60472 77736.97 0.73534 0.00043739 0.7475 0.00044462 1.4828 0.00088201 594.810056056749 599.814208048808 28.948 0.30615 28.948 28.742 29.048 0 89 15 10 0 0 0 1.4538E-13 2 13827 160.77 160.77 1 0.74353 0.87543 0 235870000 139780000 96097000 2854 785 1047 1077 4505;4506 4506 AQLGLGHSYSR 11 0 1 Unmodified _AQLGLGHSYSR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 396.8754 3 396.875516 1187.60472 92753.23 0.14842 5.8903E-05 0.03864 1.5335E-05 0.18706 7.4239E-05 396.875593587593 400.211633280112 28.948 0.31051 28.948 28.776 29.086 0 104 15 10 0 0 0 9.6022E-06 2 13804 100.55 87.976 1 0.77413 0.91687 0 423720000 240800000 182910000 2855 785 1047 1077 4507;4508 4507 AQLGLGHSYSR 11 0 1 Unmodified _AQLGLGHSYSR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.8107 2 594.809636 1187.60472 78591.98 0.71018 0.00042242 0.10518 6.256E-05 0.81535 0.00048498 594.809635900669 599.81364304012 28.135 0.3675 28.135 27.835 28.203 1.9073E-06 70 20 8 0 0 0 8.1355E-23 2 13285 188.28 164.25 1 0.71937 0.82023 0 138350000 81754000 56594000 2856 785 1047 1077 4509;4510 4510 AQLGLGHSYSR 11 0 1 Unmodified _AQLGLGHSYSR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2113 3 396.875516 1187.60472 93307.98 0.29012 0.00011514 -0.68719 -0.00027273 -0.39707 -0.00015759 396.875258969942 400.211354247413 28.126 0.30657 28.126 27.98 28.286 -1.9073E-06 90 14 9 0 0 0 8.5723E-05 2 13295 89.403 77.344 1 0.70736 0.82509 0 499860000 284680000 215180000 2857 785 1047 1077 4511;4512 4511 AQLGLGHSYSR 11 0 1 Unmodified _AQLGLGHSYSR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 396.8753 3 396.875516 1187.60472 93425.94 -0.069248 -2.7483E-05 0.13186 5.2331E-05 0.062611 2.4849E-05 396.875652816231 400.211653118093 32.739 0.38377 32.739 32.552 32.936 0 119 18 10 0 0 0 0.001675 2 14160 56.205 53.362 1 0.93429 0.80697 0 95221000 48041000 47180000 2858 785 1047 1077 4513;4514 4513 AQLGLGHSYSR 11 0 1 Unmodified _AQLGLGHSYSR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.8143 2 594.809636 1187.60472 77202.63 0.28037 0.00016677 0.75139 0.00044694 1.0318 0.0006137 594.810167627632 599.814185097506 32.74 0.59027 32.74 32.43 33.021 0 124 29 10 0 0 0 0.00074035 2 14161 87.123 87.123 1 0.96425 0.82983 0 53127000 27159000 25968000 2859 785 1047 1077 4515;4516 4515 AQLGLGHSYSR 11 0 1 Unmodified _AQLGLGHSYSR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 396.8754 3 396.875516 1187.60472 94012.27 -0.049469 -1.9633E-05 -0.030879 -1.2255E-05 -0.080348 -3.1888E-05 396.875581411786 400.211580405072 32.802 0.34297 32.802 32.596 32.939 0 90 14 11 0 0 0 0.0013394 2 13690 58.172 55.383 1 0.98521 0.85987 0 81316000 43141000 38175000 2860 785 1047 1077 4517;4518 4517 AQLGLGHSYSR 11 0 1 Unmodified _AQLGLGHSYSR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.8101 2 594.809636 1187.60472 77980.75 0.52236 0.0003107 0.32703 0.00019452 0.84938 0.00050522 594.809752086665 599.813855135213 32.797 0.36103 32.797 32.541 32.902 0 77 15 8 0 0 0 2.22E-10 2 13737 157.78 138 1 0.88679 0.77355 0 42232000 23606000 18626000 2861 785 1047 1077 4519;4520 4520 AQLIVGWR 8 0 1 Unmodified _AQLIVGWR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.7796 2 471.779619 941.544686 88237.91 0.43983 0.0002075 0.25502 0.00012031 0.69485 0.00032782 471.7795543951 476.783834840817 82.395 0.81889 82.395 81.919 82.738 0 260 69 6 0 0 0 0.027969 1 49123 53.554 20.197 1 1.0592 1.0835 0 33501000 16664000 16837000 2862 1745 1048 1078 4521 4521 AQLIVGWR 8 0 1 Unmodified _AQLIVGWR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 476.7841 2 471.779619 941.544686 88901.61 0.28588 0.00013487 0.084522 3.9876E-05 0.3704 0.00017475 471.779519773767 476.783751992939 93.7 0.83668 93.7 93.326 94.163 0 217 55 6 0 0 0 0.021849 3 52242 57.559 47.857 1 1.331 1.1126 0 3526800 1534700 1992000 2863 1745 1048 1078 4522;4523;4524 4522 AQLIVGWR 8 0 1 Unmodified _AQLIVGWR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.78 2 471.779619 941.544686 89516.95 0.32257 0.00015218 -0.010454 -4.9321E-06 0.31211 0.00014725 471.779451023849 476.783689173118 93.558 0.87785 93.558 93.169 94.047 0 194 58 4 0 0 0 0.047408 2 51391 44.692 34.386 1 1.2654 1.0886 0 2781500 1110300 1671200 2864 1745 1048 1078 4525;4526 4526 AQLLQGLDEAK 11 1 0 Unmodified _AQLLQGLDEAK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.3276 2 593.327328 1184.6401 77794.55 0.60786 0.00036066 -0.54884 -0.00032564 0.059027 3.5023E-05 593.326040042285 597.334412756349 71.532 0.65155 71.532 71.301 71.953 0 191 57 7 0 0 0 0.00014209 2 41719 95.311 72.571 1 0.95966 1.0171 0 31364000 15790000 15574000 2865 1581 1049 1079 4527;4528 4527 AQLLQGLDEAK 11 1 0 Unmodified _AQLLQGLDEAK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.3345 2 593.327328 1184.6401 77105.86 0.55257 0.00032785 -0.81408 -0.00048302 -0.26152 -0.00015517 593.326219656589 597.334174407955 70.24 0.42839 70.24 70.028 70.456 0 170 36 6 0 0 0 7.9385E-10 1 41909 125.48 77.731 1 0.90809 0.97655 0 37606000 17483000 20123000 2866 1581 1049 1079 4529 4529 AQLLQPTLEINPR 13 0 1 Unmodified _AQLLQPTLEINPR_ 0 0 0 Q5CAQ4;I3L0K7;K0A7K7;Q9BV61;Q59EK6;Q53G55;Q53FS6;A0A140VJY2;Q12931 Q5CAQ4 Q5CAQ4 TRAP1 Heat shock protein 75 kDa, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.933 2 746.92774 1491.84093 NaN NaN NaN 0.24626 0.00018394 NaN NaN NaN NaN 97.415 0.38269 97.415 97.244 97.626 0 0 0 0 0.00050027 1 59393 83.397 45.675 1 NaN NaN 0 7003200 0 7003200 2867 612 1050 1080 4530 4530 AQLLQPTLEINPR 13 0 1 Unmodified _AQLLQPTLEINPR_ 0 0 0 Q5CAQ4;I3L0K7;K0A7K7;Q9BV61;Q59EK6;Q53G55;Q53FS6;A0A140VJY2;Q12931 Q5CAQ4 Q5CAQ4 TRAP1 Heat shock protein 75 kDa, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.9316 2 746.92774 1491.84093 72556.23 0.71784 0.00053618 0.34234 0.0002557 1.0602 0.00079188 747.429579080602 751.931929831547 96.6 0.43295 96.6 96.409 96.842 7.6294E-06 91 35 4 0 0 0 0.00015701 1 60218 86.189 86.189 1 2.5318 2.5104 0 12037000 4051000 7986000 2868 612 1050 1080 4531 4531 AQLMADFQAGR 11 0 1 Oxidation (M) _AQLM(ox)ADFQAGR_ AQLM(1)ADFQAGR AQLM(51.76)ADFQAGR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3011 2 612.295504 1222.57646 NaN NaN NaN 0.11014 6.7437E-05 NaN NaN NaN NaN 47.713 0.60259 47.713 47.28 47.883 3.8147E-06 0 0 0 0.0076778 1 25775 51.762 24.02 1 NaN NaN 0 28542000 0 28542000 2869 1754 1051 1081 4532 4532 1607 AQLMADFQAGR 11 0 1 Oxidation (M) _AQLM(ox)ADFQAGR_ AQLM(1)ADFQAGR AQLM(61.35)ADFQAGR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8251 2 612.295504 1222.57646 76005.48 0.54273 0.00033231 0.40155 0.00024586 0.94427 0.00057817 612.296114608716 617.299920270185 47.935 0.40723 47.935 47.782 48.189 0 134 35 5 0 0 0 0.023276 1 26047 61.353 42.573 1 1.8423 1.8806 0 30927000 12007000 18919000 2870 1754 1051 1081 4533 4533 1607 AQLMADFQAGR 11 0 1 Oxidation (M) _AQLM(ox)ADFQAGR_ AQLM(1)ADFQAGR AQLM(50.28)ADFQAGR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.3003 2 612.295504 1222.57646 76422.05 0.4716 0.00028876 0.2759 0.00016893 0.7475 0.00045769 612.295666260003 617.299853385921 46.839 0.5873 46.839 46.524 47.112 -3.8147E-06 193 51 6 0 0 0 0.0042269 1 25886 50.284 31.972 1 2.0513 2.1882 0 24619000 8653200 15966000 2871 1754 1051 1081 4534 4534 1607 AQLNIGNVLPVGTMPEGTIVCCLEEKPGDR 30 1 1 Oxidation (M) _AQLNIGNVLPVGTM(ox)PEGTIVCCLEEKPGDR_ AQLNIGNVLPVGTM(1)PEGTIVCCLEEKPGDR AQLNIGNVLPVGTM(95.25)PEGTIVCCLEEKPGDR 0 1 1 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1095.5427 3 1095.20883 3282.60467 57636.74 0.14839 0.00016252 -0.14189 -0.00015539 0.0065049 7.1243E-06 1095.87744627364 1101.55049996387 129.87 0.41695 129.87 129.65 130.06 0 197 18 16 0 0 0 1.9924E-23 1 78573 95.255 95.255 1 0.45844 0.40566 0 46038000 30841000 15198000 2872 1653 1052 1082 4535 4535 1431 AQLNIGNVLPVGTMPEGTIVCCLEEKPGDR 30 1 1 Unmodified _AQLNIGNVLPVGTMPEGTIVCCLEEKPGDR_ 0 0 1 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1096.5519 3 1089.87719 3266.60975 56388.66 0.71314 0.00077724 -0.33126 -0.00036103 0.38189 0.00041621 1090.54544906105 1096.21860103624 134.35 0.22556 134.35 134.18 134.41 0 81 10 14 0 0 0 1.1993E-19 2 81992 80.02 80.02 1 1.22 1.0829 0 53810000 24053000 29756000 2873 1653 1052 1083 4536;4537 4536 AQLNIGNVLPVGTMPEGTIVCCLEEKPGDR 30 1 1 Unmodified _AQLNIGNVLPVGTMPEGTIVCCLEEKPGDR_ 0 0 1 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1096.2194 3 1089.87719 3266.60975 57286.38 0.46469 0.00050645 -0.43728 -0.00047658 0.027406 2.9869E-05 1090.54538114342 1096.55188466012 134.28 0.24266 134.28 134.12 134.36 0 95 12 15 0 0 0 0.051717 1 81045 11.533 9.5791 1 1.2391 1.0559 0 49431000 19637000 29794000 2874 1653 1052 1083 4538 4538 AQLPVMVIVTPQDR 14 0 1 Oxidation (M) _AQLPVM(ox)VIVTPQDR_ AQLPVM(1)VIVTPQDR AQLPVM(88.44)VIVTPQDR 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.9428 2 791.934708 1581.85486 69031.91 1.278 0.0010121 -0.031219 -2.4724E-05 1.2468 0.00098739 791.935036070013 796.938958113103 96.476 0.89307 96.476 95.87 96.763 0 369 76 7 0 0 0 3.8984E-05 2 58620 88.441 88.441 1 1.789 1.9852 0 68690000 20044000 48646000 2875 2038 1053 1084 4539;4540 4540 1874 AQLPVMVIVTPQDR 14 0 1 Oxidation (M) _AQLPVM(ox)VIVTPQDR_ AQLPVM(1)VIVTPQDR AQLPVM(74.76)VIVTPQDR 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.9396 2 791.934708 1581.85486 68358.95 1.2244 0.00096965 -0.22533 -0.00017845 0.99907 0.0007912 791.934797386261 796.938587812558 95.633 0.79859 95.633 95.242 96.041 0 308 65 6 0 0 0 7.8436E-05 2 59383 74.76 74.76 1 1.7176 1.984 0 55819000 18470000 37350000 2876 2038 1053 1084 4541;4542 4541 1874 AQLPVMVIVTPQDR 14 0 1 Oxidation (M) _AQLPVM(ox)VIVTPQDR_ AQLPVM(1)VIVTPQDR AQLPVM(65.4)VIVTPQDR 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.4352 2 791.934708 1581.85486 69007.05 0.74704 0.00059161 -0.12829 -0.0001016 0.61874 0.00049 791.935081172496 796.938874946327 109.3 0.63465 109.3 109.01 109.64 7.6294E-06 158 30 8 0 0 0 0.00011032 1 63063 65.395 65.395 1 0.94386 0.81111 0 7900700 4620700 3279900 2877 2038 1053 1084 4543 4543 1874 AQLPVMVIVTPQDR 14 0 1 Oxidation (M) _AQLPVM(ox)VIVTPQDR_ AQLPVM(1)VIVTPQDR AQLPVM(46.59)VIVTPQDR 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.9332 2 791.934708 1581.85486 70629.95 0.90307 0.00071517 -0.28625 -0.00022669 0.61682 0.00048848 791.933880132391 796.938652898021 122.48 0.37401 122.48 122.28 122.65 0 71 19 6 0 0 0 0.0018245 1 73018 46.592 46.592 1 1.5741 1.3161 0 3630600 1482500 2148200 2878 2038 1053 1084 4544 4544 1874 AQLPVMVIVTPQDR 14 0 1 Oxidation (M) _AQLPVM(ox)VIVTPQDR_ AQLPVM(1)VIVTPQDR AQLPVM(64.55)VIVTPQDR 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.9363 2 791.934708 1581.85486 68837.85 0.78194 0.00061924 -0.23629 -0.00018712 0.54565 0.00043212 791.935123025431 796.938814976625 109.18 0.57928 109.18 108.89 109.47 0 150 25 8 0 0 0 0.0001132 2 61904 64.55 58.944 1 0.96737 0.80518 0 7193500 3691100 3502400 2879 2038 1053 1084 4545;4546 4546 1874 AQLPVMVIVTPQDR 14 0 1 Unmodified _AQLPVMVIVTPQDR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.4382 2 783.93725 1565.85995 67718.02 0.88632 0.00069482 -0.39781 -0.00031185 0.48851 0.00038296 783.938137391085 788.940966126243 122.45 0.46411 122.45 122.25 122.72 0 127 23 7 0 0 0 0.0013992 2 72963 53.967 53.967 1 1.6547 1.3751 0 10883000 4313700 6569000 2880 2038 1053 1085 4547;4548 4547 AQLPVMVIVTPQDR 14 0 1 Unmodified _AQLPVMVIVTPQDR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.941 2 783.93725 1565.85995 67731.6 0.93443 0.00073253 -0.47219 -0.00037017 0.46223 0.00036236 783.937724772288 788.940939764939 122.27 0.53987 122.27 121.99 122.53 7.6294E-06 117 27 6 0 0 0 0.00010451 2 71952 84.479 84.479 1 1.4692 1.195 0 12381000 5080600 7300400 2881 2038 1053 1085 4549;4550 4549 AQLSDYSDIVTTLDLAPPTK 20 1 0 Unmodified _AQLSDYSDIVTTLDLAPPTK_ 0 0 0 A0A024R9J0;O60216 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1075.0565 2 1074.55717 2147.09978 58402.25 0.27702 0.00029767 -0.32253 -0.00034658 -0.045511 -4.8904E-05 1074.55523066774 1079.06529156682 121.73 0.44516 121.73 121.55 121.99 0 142 31 7 0 0 0 1.3851E-06 2 80608 74.769 74.769 1 0.7616 0.79051 0 9874800 5249300 4625500 2882 280 1054 1086 4551;4552 4551 AQLSGLQLQPCLYK 14 1 0 Unmodified _AQLSGLQLQPCLYK_ 0 0 0 O43159;E9PPP6 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.9373 2 809.934708 1617.85486 69001.85 0.87714 0.00071043 0.078063 6.3226E-05 0.95521 0.00077366 809.935189039726 813.94212061167 98.166 0.48439 98.166 98.025 98.51 -7.6294E-06 133 39 5 0 0 0 0.00024256 1 59962 63.283 63.283 1 0.84291 0.86124 0 14303000 6012400 8290500 2883 1380 1055 1087 4553 4553 AQLSGLQLQPCLYK 14 1 0 Unmodified _AQLSGLQLQPCLYK_ 0 0 0 O43159;E9PPP6 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.9368 2 809.934708 1617.85486 69538.13 0.83713 0.00067802 0.43904 0.00035559 1.2762 0.0010336 810.436475502035 813.942294306634 111.19 0.56726 111.19 110.84 111.41 0 118 24 9 0 0 0 0.00017671 1 64386 72.652 72.652 1 0.72561 0.58168 0 7459400 3976200 3483200 2884 1380 1055 1087 4554 4554 AQLSGLQLQPCLYK 14 1 0 Unmodified _AQLSGLQLQPCLYK_ 0 0 0 O43159;E9PPP6 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 810.4371 2 809.934708 1617.85486 69343.52 0.68576 0.00055542 0.10502 8.5062E-05 0.79079 0.00064048 809.934894960063 813.942147445842 111.07 0.51745 111.07 110.74 111.26 0 118 25 7 0 0 0 0.00018848 2 63344 70.977 70.977 1 0.65524 0.53557 0 8225700 5156800 3068900 2885 1380 1055 1087 4555;4556 4556 AQLSSSLQEGVMQK 14 1 0 Oxidation (M) _AQLSSSLQEGVM(ox)QK_ AQLSSSLQEGVM(1)QK AQLSSSLQEGVM(103.21)QK 0 1 0 O96028;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.3834 2 761.382505 1520.75046 70051.91 0.7347 0.00055939 0.1953 0.0001487 0.93 0.00070809 761.883958667439 765.389924983965 46.284 0.6629 46.284 45.959 46.622 -3.8147E-06 155 57 5 0 0 0 1.5539E-06 1 24850 103.21 103.21 1 1.1453 1.1948 0 16784000 9803800 6980700 2886 1435 1056 1088 4557 4557 1133 AQLSSSLQEGVMQK 14 1 0 Oxidation (M) _AQLSSSLQEGVM(ox)QK_ AQLSSSLQEGVM(1)QK AQLSSSLQEGVM(90.15)QK 0 1 0 O96028;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.3895 2 761.382505 1520.75046 NaN NaN NaN -0.055826 -4.2505E-05 NaN NaN NaN NaN 46.088 0.30106 46.088 45.931 46.232 3.8147E-06 0 0 0 2.4271E-05 1 24928 90.146 66.91 1 NaN NaN 0 8204000 0 8204000 2887 1435 1056 1088 4558 4558 1133 AQLSSSLQEGVMQK 14 1 0 Oxidation (M) _AQLSSSLQEGVM(ox)QK_ AQLSSSLQEGVM(1)QK AQLSSSLQEGVM(89.28)QK 0 1 0 O96028;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.3903 2 761.382505 1520.75046 70314.75 0.59648 0.00045415 0.010159 7.7346E-06 0.60664 0.00046188 761.38275817301 765.389904290171 45.244 0.56987 45.244 44.91 45.48 0 173 49 5 0 0 0 3.6308E-05 2 24665 89.283 89.283 1 1.2005 1.2885 0 21396000 9708500 11687000 2888 1435 1056 1088 4559;4560 4560 1133 AQLSSSLQEGVMQK 14 1 0 Oxidation (M) _AQLSSSLQEGVM(ox)QK_ AQLSSSLQEGVM(1)QK AQLSSSLQEGVM(42.08)QK 0 1 0 O96028;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.3896 2 761.382505 1520.75046 70571.9 0.55814 0.00042496 -0.30627 -0.00023319 0.25187 0.00019177 761.382744427557 765.389222781916 54.185 0.73256 54.185 53.868 54.6 -3.8147E-06 218 52 5 0 0 0 0.0031176 1 26296 42.083 42.083 1 1.5863 1.2891 0 2934200 1187000 1747200 2889 1435 1056 1088 4561 4561 1133 AQLSSSLQEGVMQK 14 1 0 Unmodified _AQLSSSLQEGVMQK_ 0 0 0 O96028;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.3916 2 753.385048 1504.75554 NaN NaN NaN 1.4265 0.0010747 NaN NaN NaN NaN 71.76 0.39941 71.76 71.518 71.918 0 0 0 0 0.011671 1 37750 50.95 35.684 1 NaN NaN 0 2843500 0 2843500 2890 1435 1056 1089 4562 4562 AQLVLVGATFPEGVGQLLNK 20 1 0 Unmodified _AQLVLVGATFPEGVGQLLNK_ 0 0 0 Q9NUL7 Q9NUL7 Q9NUL7 DDX28 Probable ATP-dependent RNA helicase DDX28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1028.0872 2 1027.58586 2053.15718 61958.57 0.18975 0.00019498 0.47865 0.00049185 0.6684 0.00068684 1027.5857117999 1032.09566919175 128.49 0.27579 128.49 128.36 128.64 0 74 19 6 0 0 0 0.00012757 1 83767 42.209 40.376 1 0.77933 0.82431 0 3774100 1993400 1780700 2891 2072 1057 1090 4563 4563 AQNDLIWNIK 10 1 0 Unmodified _AQNDLIWNIK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.836 2 607.830037 1213.64552 77561.41 0.31132 0.00018923 -0.89814 -0.00054592 -0.58682 -0.00035669 607.829732223009 611.836186646533 103.06 1.0405 103.06 102.48 103.52 -7.6294E-06 323 69 6 0 0 0 0.020901 1 57754 46.462 46.462 1 1.0141 0.83591 0 10841000 4904100 5937300 2892 139 1058 1091 4564 4564 AQNDLIWNIKDELK 14 2 0 Unmodified _AQNDLIWNIKDELK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.3058 3 567.305305 1698.89408 81523.74 0.82536 0.00046823 0.088581 5.0252E-05 0.91394 0.00051848 567.639734141348 572.647942428704 111.77 0.35096 111.77 111.59 111.94 -7.6294E-06 137 21 9 0 0 0 0.014121 2 64790 30.961 26.719 1 1.1508 0.97983 0 26040000 13242000 12798000 2893 139 1059 1092 4565;4566 4565 AQNDLIWNIKDELK 14 2 0 Unmodified _AQNDLIWNIKDELK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.9832 3 567.305305 1698.89408 80896.2 0.5397 0.00030618 0.24405 0.00013845 0.78375 0.00044463 567.639809318393 572.648114625079 111.55 0.32861 111.55 111.38 111.71 0 114 19 7 0 0 0 0.00010888 1 63727 64.244 60.142 1 1.0351 0.87758 0 19481000 9967400 9513600 2894 139 1059 1092 4567 4567 AQNIMESFENPFR 13 0 1 Oxidation (M) _AQNIM(ox)ESFENPFR_ AQNIM(1)ESFENPFR AQNIM(54.49)ESFENPFR 0 1 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.8718 2 799.867022 1597.71949 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.367 1 88.367 87.867 88.867 0 0 0 0 0.0044155 1 54506 54.486 41.91 1 2895 1676 1060 1093 4568 4568 1473 AQNIMESFENPFR 13 0 1 Oxidation (M) _AQNIM(ox)ESFENPFR_ AQNIM(1)ESFENPFR AQNIM(62.41)ESFENPFR 0 1 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.874 2 799.867022 1597.71949 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.389 1 88.389 87.889 88.889 7.6294E-06 0 0 0 0.0017826 1 54516 62.408 47.47 1 2896 1676 1060 1093 4569 4569 1473 AQNIMESFENPFR 13 0 1 Oxidation (M) _AQNIM(ox)ESFENPFR_ AQNIM(1)ESFENPFR AQNIM(51.29)ESFENPFR 0 1 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.8703 2 799.867022 1597.71949 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.427 1 88.427 87.927 88.927 0 0 0 0 0.0066159 1 54537 51.286 36.62 1 2897 1676 1060 1093 4570 4570 1473 AQNIMESFENPFR 13 0 1 Oxidation (M) _AQNIM(ox)ESFENPFR_ AQNIM(1)ESFENPFR AQNIM(69.72)ESFENPFR 0 1 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.8671 2 799.867022 1597.71949 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.006 1 89.006 88.506 89.506 0 0 0 0 0.00083539 1 54914 69.721 62.154 1 2898 1676 1060 1093 4571 4571 1473 AQNSELASTANMLR 14 0 1 Oxidation (M) _AQNSELASTANM(ox)LR_ AQNSELASTANM(1)LR AQNSELASTANM(80.24)LR 0 1 0 P05412;Q6FHK0 P05412 P05412 JUN Transcription factor AP-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.3676 2 761.369929 1520.72531 NaN NaN NaN 4.4698 0.0034031 NaN NaN NaN NaN 49.513 0.24206 49.513 49.387 49.629 0 0 0 0 0.00010611 2 27254 80.245 63.991 1 NaN NaN 0 7063500 7063500 0 2899 1447 1061 1094 4572;4573 4573 1153 AQNSELASTANMLR 14 0 1 Oxidation (M) _AQNSELASTANM(ox)LR_ AQNSELASTANM(1)LR AQNSELASTANM(50.95)LR 0 1 0 P05412;Q6FHK0 P05412 P05412 JUN Transcription factor AP-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.8724 2 761.369929 1520.72531 NaN NaN NaN -1.9259 -0.0014663 NaN NaN NaN NaN 49.938 0.53321 49.938 49.701 50.234 0 0 0 0 0.0036347 1 27529 50.95 30.25 1 NaN NaN 0 6824200 0 6824200 2900 1447 1061 1094 4574 4574 1153 AQNSELASTANMLR 14 0 1 Oxidation (M) _AQNSELASTANM(ox)LR_ AQNSELASTANM(1)LR AQNSELASTANM(55.45)LR 0 1 0 P05412;Q6FHK0 P05412 P05412 JUN Transcription factor AP-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.3742 2 761.369929 1520.72531 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.114 1 49.114 48.614 49.614 0 0 0 0 0.0024479 1 27596 55.452 40.576 1 2901 1447 1061 1094 4575 4575 1153 AQNSELASTANMLR 14 0 1 Oxidation (M) _AQNSELASTANM(ox)LR_ AQNSELASTANM(1)LR AQNSELASTANM(90.69)LR 0 1 0 P05412;Q6FHK0 P05412 P05412 JUN Transcription factor AP-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.3702 2 761.369929 1520.72531 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.21 1 49.21 48.71 49.71 0 0 0 0 7.8579E-05 1 27662 90.685 77.094 1 2902 1447 1061 1094 4576 4576 1153 AQNTWGCGNSLR 12 0 1 Unmodified _AQNTWGCGNSLR_ 0 0 0 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3172 2 682.312217 1362.60988 73035.53 0.69216 0.00047227 -0.83599 -0.0005704 -0.14383 -9.8135E-05 682.312302197607 687.316338830258 37.898 0.5297 37.898 37.659 38.188 0 206 44 6 0 0 0 4.2647E-08 2 19405 115.78 107.25 1 1.0036 1.0289 0 25936000 11978000 13958000 2903 1440 1062 1095 4577;4578 4578 AQNTWGCGNSLR 12 0 1 Unmodified _AQNTWGCGNSLR_ 0 0 0 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.3187 2 682.312217 1362.60988 74014.23 0.78771 0.00053747 -0.51555 -0.00035176 0.27217 0.0001857 682.312417674354 687.31645461558 36.986 0.43875 36.986 36.745 37.183 3.8147E-06 160 33 6 0 0 0 1.1201E-17 2 19108 138.66 130.13 1 0.98797 1.1073 0 45262000 22578000 22685000 2904 1440 1062 1095 4579;4580 4580 AQNTWGCGNSLR 12 0 1 Unmodified _AQNTWGCGNSLR_ 0 0 0 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.3167 2 682.312217 1362.60988 72721.79 0.56083 0.00038266 -0.27781 -0.00018955 0.28302 0.00019311 682.312268848163 687.316688072287 43.521 0.86409 43.521 43.039 43.903 -3.8147E-06 264 57 8 0 0 0 0.00072975 3 20476 66.664 62.213 1 1.3526 1.1067 0 13458000 5154500 8303200 2905 1440 1062 1095 4581;4582;4583 4582 AQNTWGCGNSLR 12 0 1 Unmodified _AQNTWGCGNSLR_ 0 0 0 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.3126 2 682.312217 1362.60988 72163.73 0.48383 0.00033012 -0.18617 -0.00012702 0.29766 0.0002031 682.312280062075 687.316615657641 43.71 0.93507 43.71 43.169 44.104 3.8147E-06 317 60 9 0 0 0 0.0010988 2 20022 62.005 57.554 1 1.3351 1.0773 0 10956000 4792000 6164300 2906 1440 1062 1095 4584;4585 4585 AQPLEDLAGFTELSETSGHTQESLTAGK 28 1 0 Unmodified _AQPLEDLAGFTELSETSGHTQESLTAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 973.4738 3 973.140235 2916.39888 61571.25 0.41372 0.00040261 0.31158 0.00030321 0.7253 0.00070581 973.474989078525 976.146135717909 110.08 0.87565 110.08 109.77 110.65 0 543 62 13 0 0 0 8.8574E-28 4 68886 105.17 92.533 1 1.77 2.1058 0 605200000 213140000 392060000 2907 1569 1063 1096 4586;4587;4588;4589 4587 AQPLEDLAGFTELSETSGHTQESLTAGK 28 1 0 Unmodified _AQPLEDLAGFTELSETSGHTQESLTAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 976.1455 3 973.140235 2916.39888 61556.21 0.28372 0.0002761 0.25494 0.00024809 0.53866 0.00052419 973.474904102289 976.146088068005 109.49 0.78344 109.49 109.2 109.98 -7.6294E-06 483 52 13 0 0 0 1.5186E-10 3 70128 52.824 47.164 1 1.6973 1.9993 0 523480000 190920000 332550000 2908 1569 1063 1096 4590;4591;4592 4591 AQPLEDLAGFTELSETSGHTQESLTAGK 28 1 0 Unmodified _AQPLEDLAGFTELSETSGHTQESLTAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 973.4755 3 973.140235 2916.39888 61213.71 0.24542 0.00023883 0.53577 0.00052138 0.78119 0.00076021 973.475967892408 976.146453334128 121.04 1.3559 121.04 120.78 122.14 0 375 66 14 0 0 0 5.1232E-35 2 71920 118.57 110.18 1 3.1906 2.8638 0 571760000 129340000 442420000 2909 1569 1063 1096 4593;4594 4593 AQPLEDLAGFTELSETSGHTQESLTAGK 28 1 0 Unmodified _AQPLEDLAGFTELSETSGHTQESLTAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 973.4752 3 973.140235 2916.39888 61497.83 0.28173 0.00027416 0.083221 8.0985E-05 0.36495 0.00035515 973.475203457693 976.145966921902 120.92 1.3338 120.92 120.58 121.91 0 399 65 15 0 0 0 3.5021E-19 3 70827 77.065 71.345 1 3.0686 2.6854 0 492850000 117910000 374940000 2910 1569 1063 1096 4595;4596;4597 4596 AQPLEDLAGLK 11 1 0 Unmodified _AQPLEDLAGLK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.8322 2 577.824421 1153.63429 79261.76 0.6911 0.00039934 0.13954 8.0631E-05 0.83065 0.00047997 577.824596871088 581.831441668572 86.939 1.1548 86.939 86.452 87.606 0 598 94 9 0 0 0 0.00042315 4 52715 95.502 95.502 1 1.7264 2.0543 0 611380000 217860000 393520000 2911 1569 1064 1097 4598;4599;4600;4601 4601 AQPLEDLAGLK 11 1 0 Unmodified _AQPLEDLAGLK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.8243 2 577.824421 1153.63429 79763.77 0.63979 0.00036968 0.11738 6.7825E-05 0.75716 0.00043751 577.824555901219 581.831377427323 85.846 1.2942 85.846 85.391 86.686 0 573 106 9 0 0 0 0.0003981 4 52675 98.044 94.309 1 1.7928 2.1111 0 478050000 172610000 305440000 2912 1569 1064 1097 4602;4603;4604;4605 4603 AQPLEDLAGLK 11 1 0 Unmodified _AQPLEDLAGLK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.8316 2 577.824421 1153.63429 78761.75 0.51409 0.00029705 0.12146 7.018E-05 0.63554 0.00036723 577.82467628785 581.831525372721 99.657 1.6446 99.657 98.953 100.6 0 587 115 9 0 0 0 0.019415 2 56477 53.327 45.107 1 3.4016 2.9658 0 161430000 38278000 123150000 2913 1569 1064 1097 4606;4607 4606 AQPLEDLAGLK 11 1 0 Unmodified _AQPLEDLAGLK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.8317 2 577.824421 1153.63429 78527.88 0.39515 0.00022833 0.1922 0.00011106 0.58735 0.00033938 577.824642368997 581.831551835045 99.412 1.7103 99.412 98.8 100.51 -7.6294E-06 707 129 9 0 0 0 0.020897 2 55517 52.579 52.579 1 3.501 2.9915 0 107040000 24354000 82689000 2914 1569 1064 1097 4608;4609 4609 AQPLSLEELLAK 12 1 0 Unmodified _AQPLSLEELLAK_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56;F8VVA2 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3871 2 656.37956 1310.74457 76110.37 0.55712 0.00036568 -0.096541 -6.3367E-05 0.46058 0.00030232 656.37948658621 660.386738247387 113.78 0.6149 113.78 113.48 114.1 -7.6294E-06 201 44 6 0 0 0 0.002854 1 74016 57.532 47.578 1 0.87765 0.89224 0 16810000 8763700 8046400 2915 63 1065 1098 4610 4610 AQPLSLEELLAK 12 1 0 Unmodified _AQPLSLEELLAK_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56;F8VVA2 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.3872 2 656.37956 1310.74457 78262.55 1.0825 0.00071051 -0.34961 -0.00022948 0.73286 0.00048103 656.378986493281 660.386461443875 126.19 0.49938 126.19 125.92 126.42 0 85 19 6 0 0 0 0.019849 1 75866 39.785 35.631 1 1.1781 0.93002 0 6003000 2614300 3388700 2916 63 1065 1098 4611 4611 AQPLSLEELLAK 12 1 0 Unmodified _AQPLSLEELLAK_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56;F8VVA2 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 660.387 2 656.37956 1310.74457 79452.73 0.72192 0.00047386 -0.042292 -2.776E-05 0.67963 0.0004461 656.379341146767 660.386736443168 125.96 0.53407 125.96 125.72 126.25 0 107 24 6 0 0 0 0.015563 1 74851 42.802 42.802 1 1.091 0.89505 0 5132500 2353700 2778800 2917 63 1065 1098 4612 4612 AQPSASLGVGYR 12 0 1 Unmodified _AQPSASLGVGYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.3219 2 603.317294 1204.62004 79438.27 0.83369 0.00050298 -0.5414 -0.00032664 0.29228 0.00017634 603.317266551593 608.32082281205 49.443 0.86552 49.443 49.171 50.037 0 168 60 6 0 0 0 0.000197 1 27085 90.108 56.75 1 1.6266 1.8095 0 76665000 28600000 48065000 2918 571 1066 1099 4613 4613 AQPSASLGVGYR 12 0 1 Unmodified _AQPSASLGVGYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.3179 2 603.317294 1204.62004 78677.84 0.56972 0.00034372 0.12085 7.2913E-05 0.69058 0.00041664 603.317240168071 608.321465546309 57.111 0.66263 57.111 56.724 57.386 3.8147E-06 207 47 6 0 0 0 0.001682 2 28921 60.518 39.055 1 1.0367 0.89146 0 6764800 3567600 3197200 2919 571 1066 1099 4614;4615 4615 AQPSASLGVGYR 12 0 1 Unmodified _AQPSASLGVGYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.3217 2 603.317294 1204.62004 79731.21 0.59174 0.00035701 -0.051023 -3.0783E-05 0.54071 0.00032622 603.317072272314 608.321395551927 57.557 0.79033 57.557 57.229 58.019 3.8147E-06 215 55 6 0 0 0 0.0043643 2 28414 53.683 35.371 1 1.07 0.94627 0 4005700 2095700 1910100 2920 571 1066 1099 4616;4617 4616 AQPSVSLGAAYR 12 0 1 Unmodified _AQPSVSLGAAYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.3318 2 610.325119 1218.63569 74567.43 0.54298 0.00033139 -0.20351 -0.00012421 0.33947 0.00020718 610.325249654395 615.329705564756 57.746 0.94442 57.746 57.38 58.325 0 350 75 7 0 0 0 0.00023447 2 32524 87.913 75.866 1 1.4 1.4864 0 42297000 15532000 26764000 2921 571 1067 1100 4618;4619 4618 AQPSVSLGAAYR 12 0 1 Unmodified _AQPSVSLGAAYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.329 2 610.325119 1218.63569 76490.58 0.50354 0.00030732 -0.1408 -8.5937E-05 0.36273 0.00022138 610.325216070072 615.3296268991 56.873 0.84982 56.873 56.526 57.375 0 270 63 7 0 0 0 0.0010242 2 32670 62.303 51.445 1 1.5045 1.7247 0 51484000 21240000 30244000 2922 571 1067 1100 4620;4621 4620 AQPSVSLGAAYR 12 0 1 Unmodified _AQPSVSLGAAYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.3256 2 610.325119 1218.63569 75377.22 0.4272 0.00026073 -0.12785 -7.8032E-05 0.29935 0.0001827 610.325063690057 615.329627156287 67.403 0.63947 67.403 67.05 67.689 0 258 48 7 0 0 0 0.031113 1 34983 43.512 39.061 1 0.83808 0.72016 0 6443200 3454500 2988700 2923 571 1067 1100 4622 4622 AQPSVSLGAAYR 12 0 1 Unmodified _AQPSVSLGAAYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.3289 2 610.325119 1218.63569 73684.91 0.37139 0.00022667 -0.32095 -0.00019589 0.050438 3.0784E-05 610.325162121474 615.329415534473 67.948 0.65632 67.948 67.587 68.243 0 265 49 7 0 0 0 0.013574 1 34742 44.203 41.09 1 0.86494 0.71772 0 5776000 2979100 2796900 2924 571 1067 1100 4623 4623 AQPSVSLGAPYR 12 0 1 Unmodified _AQPSVSLGAPYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.338 2 623.332944 1244.65134 76665.95 0.50305 0.00031357 0.29302 0.00018265 0.79607 0.00049622 623.33296124616 628.337259307971 61.544 0.86296 61.544 61.076 61.939 0 328 67 6 0 0 0 0.00023447 2 35008 87.913 76.749 1 1.4611 1.4906 0 30717000 13471000 17246000 2925 571 1068 1101 4624;4625 4624 AQPSVSLGAPYR 12 0 1 Unmodified _AQPSVSLGAPYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3375 2 623.332944 1244.65134 76609.99 0.35284 0.00021993 0.35125 0.00021895 0.70409 0.00043888 623.333057844866 628.337256266325 60.391 0.62348 60.391 59.953 60.576 0 164 38 7 0 0 0 0.00020601 2 35050 79.974 71.349 1 1.5158 1.7495 0 70959000 28352000 42607000 2926 571 1068 1101 4626;4627 4626 AQPSVSLGAPYR 12 0 1 Unmodified _AQPSVSLGAPYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.8392 2 623.332944 1244.65134 76567.77 0.29282 0.00018252 0.33702 0.00021008 0.62984 0.0003926 623.332972631871 628.337258672519 71.219 0.66602 71.219 70.905 71.571 0 210 43 7 0 0 0 0.015647 1 37357 42.743 38.589 1 1.0687 0.91542 0 6066500 3015700 3050800 2927 571 1068 1101 4628 4628 AQPSVSLGAPYR 12 0 1 Unmodified _AQPSVSLGAPYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.3317 2 623.332944 1244.65134 76918.29 0.083852 5.2268E-05 0.43918 0.00027375 0.52303 0.00032602 623.33314567756 628.337384242362 71.729 0.68858 71.729 71.339 72.027 0 223 45 6 0 0 0 0.037481 1 36881 34.692 30.394 1 1.0882 0.90286 0 5185700 2348500 2837300 2928 571 1068 1101 4629 4629 AQPTPSSSATQSKPTPVK 18 2 0 Unmodified _AQPTPSSSATQSKPTPVK_ 0 0 1 P61964;V9GYQ5;V9GZ59 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.6546 3 604.654774 1810.94249 77953.4 0.24414 0.00014762 -0.043429 -2.626E-05 0.20071 0.00012136 604.989123478812 609.997483192737 20.218 0.2365 20.218 20.108 20.345 0 29 7 5 0 0 0 9.0027E-06 1 6689 73.11 73.11 1 0.82337 0.97646 0 27284000 14172000 13112000 2929 1630 1069 1102 4630 4630 AQPTPSSSATQSKPTPVK 18 2 0 Unmodified _AQPTPSSSATQSKPTPVK_ 0 0 1 P61964;V9GYQ5;V9GZ59 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 906.4776 2 906.478522 1810.94249 65734.34 0.16317 0.00014791 0.39794 0.00036072 0.56111 0.00050863 906.478392253819 914.994391682653 20.23 0.18606 20.23 20.108 20.295 0 21 5 5 0 0 0 7.7303E-05 2 6707 88.552 88.552 1 1.2798 1.4233 0 5720000 1818200 3901900 2930 1630 1069 1102 4631;4632 4632 AQPTPSSSATQSKPTPVK 18 2 0 Unmodified _AQPTPSSSATQSKPTPVK_ 0 0 1 P61964;V9GYQ5;V9GZ59 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.6554 3 604.654774 1810.94249 77389.31 0.32352 0.00019562 0.20732 0.00012536 0.53084 0.00032098 604.989233508103 609.997798324958 20.199 0.33769 20.199 20.043 20.381 0 58 11 10 0 0 0 1.6488E-06 1 6522 84.829 84.829 1 0.92492 1.0697 0 37774000 21344000 16430000 2931 1630 1069 1102 4633 4633 AQPTPSSSATQSKPTPVK 18 2 0 Unmodified _AQPTPSSSATQSKPTPVK_ 0 0 1 P61964;V9GYQ5;V9GZ59 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 906.479 2 906.478522 1810.94249 64654.35 0.42351 0.0003839 0.46598 0.0004224 0.88949 0.0008063 906.478586910431 914.493245350612 20.197 0.20754 20.197 20.073 20.28 -1.9073E-06 31 6 8 0 0 0 0.0045728 1 6527 53.252 53.252 1 0.9794 1.1183 0 13652000 7014600 6637600 2932 1630 1069 1102 4634 4634 AQPTPSSSATQSKPTPVK 18 2 0 Unmodified _AQPTPSSSATQSKPTPVK_ 0 0 1 P61964;V9GYQ5;V9GZ59 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.3324 3 604.654774 1810.94249 76970.48 0.1541 9.3174E-05 -0.0048609 -2.9391E-06 0.14923 9.0235E-05 604.654897291492 609.997556654989 22.085 0.39104 22.085 21.889 22.281 0 71 14 9 0 0 0 0.0032724 2 6922 31.818 29.801 1 1.6948 1.4539 0 7886400 2954600 4931800 2933 1630 1069 1102 4635;4636 4635 AQPTPSSSATQSKPTPVK 18 2 0 Unmodified _AQPTPSSSATQSKPTPVK_ 0 0 1 P61964;V9GYQ5;V9GZ59 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.9977 3 604.654774 1810.94249 77312.34 0.13043 7.8865E-05 0.091535 5.5347E-05 0.22196 0.00013421 604.988955718751 609.997705552117 22.039 0.36281 22.039 21.859 22.222 0 65 12 9 0 0 0 0.0036554 1 6475 31.111 31.111 1 2.033 1.7294 0 5558800 2032000 3526800 2934 1630 1069 1102 4637 4637 AQPTPSSSATQSKPTPVKPNYALK 24 3 0 Unmodified _AQPTPSSSATQSKPTPVKPNYALK_ 0 0 2 P61964;V9GYQ5;V9GZ59 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.5981 4 625.33669 2497.31765 76126.91 0.58283 0.00036447 -0.3596 -0.00022487 0.22323 0.00013959 625.587290107313 631.3471884436 45.855 0.53899 45.855 45.546 46.085 0 211 35 10 0 0 0 4.1193E-06 2 21395 46.178 43.022 1 1.7665 1.7472 0 6674300 2021800 4652600 2935 1630 1070 1103 4638;4639 4638 AQPVPHYGVPFKPQIPEAR 19 1 1 Unmodified _AQPVPHYGVPFKPQIPEAR_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.0477 4 533.541637 2130.13744 82242.97 0.68089 0.00036328 -0.23415 -0.00012493 0.44674 0.00023835 533.792470274167 538.046951449626 82.586 0.53533 82.586 82.348 82.883 0 147 43 5 0 0 0 0.003961 1 49267 24.029 20.481 1 0.8649 1.0002 0 28697000 16541000 12156000 2936 1837 1071 1104 4640 4640 AQPVPHYGVPFKPQIPEAR 19 1 1 Unmodified _AQPVPHYGVPFKPQIPEAR_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.2984 4 533.541637 2130.13744 83809.19 0.73994 0.00039479 -0.22797 -0.00012163 0.51197 0.00027316 534.042833185149 538.046930624056 79.949 1.2236 79.949 79.161 80.384 0 313 99 7 0 0 0 0.0030825 1 48480 24.407 24.407 1 1.0441 1.1987 0 24700000 12186000 12514000 2937 1837 1071 1104 4641 4641 AQPVPHYGVPFKPQIPEAR 19 1 1 Unmodified _AQPVPHYGVPFKPQIPEAR_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.7925 4 533.541637 2130.13744 80415.52 0.53419 0.00028501 0.02725 1.4539E-05 0.56144 0.00029955 533.792487744552 538.298034211667 91.941 1.0374 91.941 91.635 92.673 0 402 60 11 0 0 0 0.0013563 2 51023 30.152 30.152 1 1.2295 1.0815 0 34102000 15185000 18917000 2938 1837 1071 1104 4642;4643 4643 AQPVPHYGVPFKPQIPEAR 19 1 1 Unmodified _AQPVPHYGVPFKPQIPEAR_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.7922 4 533.541637 2130.13744 80547.6 0.44631 0.00023812 -0.11585 -6.1812E-05 0.33045 0.00017631 533.792334992198 538.297890768987 91.439 0.83225 91.439 91.153 91.985 0 429 55 11 0 0 0 1.0701E-05 2 49883 45.704 45.704 1 1.3064 1.1098 0 25921000 12039000 13882000 2939 1837 1071 1104 4644;4645 4644 AQQEDALAQQAFEEAR 16 0 1 Unmodified _AQQEDALAQQAFEEAR_ 0 0 0 J3KS23;A0A024R6X2;Q13951;J3KRT0;A8K719 J3KS23 J3KS23 CBFB Core-binding factor subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 908.4337 2 902.926654 1803.83875 NaN NaN NaN 0.79663 0.0007193 NaN NaN NaN NaN 77.887 0.46875 77.887 77.622 78.09 0 0 0 0 3.5018E-06 2 45922 82.069 72.88 1 NaN NaN 0 5709000 0 5709000 2940 210 1072 1105 4646;4647 4647 AQQGIVFLDEVDK 13 1 0 Unmodified _AQQGIVFLDEVDK_ 0 0 0 Q9H072;A0A024R5X7;O76031 Q9H072 Q9H072 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.3841 2 731.382831 1460.75111 70916.87 0.76984 0.00056305 -0.34999 -0.00025597 0.41985 0.00030707 731.883915043406 735.389192589795 99.461 0.92947 99.461 98.955 99.885 0 195 76 4 0 0 0 0.013064 1 62095 38.714 16.934 1 1.2239 1.2381 0 16442000 7888200 8553900 2941 191 1073 1106 4648 4648 AQQIHSQTSQQYPLYDLDLGK 21 1 0 Unmodified _AQQIHSQTSQQYPLYDLDLGK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.0738 3 811.739677 2432.1972 68947.88 0.47637 0.00038669 0.11156 9.0556E-05 0.58793 0.00047725 812.073349553911 814.745366724744 86.511 0.44604 86.511 86.322 86.768 0 132 38 6 0 0 0 1.7736E-07 1 53255 58.035 58.035 1 0.42358 0.43277 0 25788000 17587000 8200400 2942 1486 1074 1107 4649 4649 AQQIHSQTSQQYPLYDLDLGK 21 1 0 Unmodified _AQQIHSQTSQQYPLYDLDLGK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.4142 3 811.739677 2432.1972 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.428 1 86.428 85.928 86.928 -7.6294E-06 0 0 0 0.0062375 1 53273 51.777 43.387 1 2943 1486 1074 1107 4650 4650 AQQIHSQTSQQYPLYDLDLGK 21 1 0 Unmodified _AQQIHSQTSQQYPLYDLDLGK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.0745 3 811.739677 2432.1972 68786.6 0.40307 0.00032719 0.64153 0.00052075 1.0446 0.00084794 812.074125767834 814.413556755487 100.62 0.50046 100.62 100.35 100.85 0 180 36 8 0 0 0 0.039856 1 56976 13.038 10.156 1 0.50093 0.39447 0 5782900 4022100 1760700 2944 1486 1074 1107 4651 4651 AQQPAAELMQDTR 13 0 1 Oxidation (M) _AQQPAAELM(ox)QDTR_ AQQPAAELM(1)QDTR AQQPAAELM(112.13)QDTR 0 1 0 A0A024RCP3;Q12899 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.8531 2 737.851372 1473.68819 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.162 1 35.162 34.662 35.662 0 0 0 0 8.269E-11 1 17649 112.13 101.3 1 2945 365 1075 1108 4652 4652 273 AQQPAAELMQDTR 13 0 1 Oxidation (M) _AQQPAAELM(ox)QDTR_ AQQPAAELM(1)QDTR AQQPAAELM(46.35)QDTR 0 1 0 A0A024RCP3;Q12899 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.8496 2 737.851372 1473.68819 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.318 1 35.318 34.818 35.818 0 0 0 0 0.010009 1 17746 46.352 37.394 1 2946 365 1075 1108 4653 4653 273 AQQPAAELMQDTR 13 0 1 Oxidation (M) _AQQPAAELM(ox)QDTR_ AQQPAAELM(1)QDTR AQQPAAELM(89.55)QDTR 0 1 0 A0A024RCP3;Q12899 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.8542 2 737.851372 1473.68819 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.31 1 34.31 33.81 34.81 0 0 0 0 0.00012338 1 17354 89.548 79.861 1 2947 365 1075 1108 4654 4654 273 AQQQEEQGSVNDVKEEEK 18 2 0 Unmodified _AQQQEEQGSVNDVKEEEK_ 0 0 1 Q9Y4W2;B3KNR6 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.6653 3 692.3223 2073.94507 75164.52 0.13513 9.3552E-05 0.18981 0.00013141 0.32494 0.00022496 692.321976484139 697.665184530036 19.218 0.2292 19.218 19.135 19.364 0 27 7 6 0 0 0 0.00013571 1 5727 46.892 46.892 1 1.5144 1.7239 0 8849000 3101000 5748000 2948 2146 1076 1109 4655 4655 AQQQEEQGSVNDVKEEEK 18 2 0 Unmodified _AQQQEEQGSVNDVKEEEK_ 0 0 1 Q9Y4W2;B3KNR6 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.3223 3 692.3223 2073.94507 72388.53 0.07635 5.2859E-05 0.52591 0.0003641 0.60226 0.00041696 692.65672506331 697.665557930831 21.468 0.29656 21.468 21.325 21.622 0 45 9 7 0 0 0 0.0039359 1 6514 30.593 26.241 1 1.2543 1.1112 0 2320200 865950 1454300 2949 2146 1076 1109 4656 4656 AQQQEEQGSVNDVKEEEK 18 2 0 Unmodified _AQQQEEQGSVNDVKEEEK_ 0 0 1 Q9Y4W2;B3KNR6 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.3226 3 692.3223 2073.94507 71406.2 0.10039 6.9504E-05 0.34852 0.00024129 0.44891 0.00031079 692.322503434361 697.665327459258 21.49 0.28887 21.49 21.359 21.648 0 64 11 9 0 0 0 2.9892E-05 1 6094 53.565 53.565 1 1.2299 1.0671 0 2652200 1260900 1391400 2950 2146 1076 1109 4657 4657 AQSLVISPPAPSPR 14 0 1 Unmodified _AQSLVISPPAPSPR_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.4053 2 710.401358 1418.78816 72764.48 0.71564 0.00050839 -0.026329 -1.8704E-05 0.68931 0.00048969 710.401427175276 715.405440031389 78.238 0.69688 78.238 77.873 78.57 0 302 57 7 0 0 0 2.8798E-09 2 46211 114.82 106.87 1 2.0561 2.2861 0 74986000 26556000 48430000 2951 1569;1864 1077 1110 4658;4659 4659 AQSLVISPPAPSPR 14 0 1 Unmodified _AQSLVISPPAPSPR_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.4009 2 710.401358 1418.78816 72675.8 0.56386 0.00040057 0.065581 4.6589E-05 0.62944 0.00044716 710.40140890972 715.405516721621 77.256 0.74496 77.256 76.871 77.616 0 301 60 7 0 0 0 0.00010959 2 46567 83.617 75.972 1 2.0859 2.3808 0 92590000 31476000 61114000 2952 1569;1864 1077 1110 4660;4661 4661 AQSLVISPPAPSPR 14 0 1 Unmodified _AQSLVISPPAPSPR_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.4061 2 710.401358 1418.78816 71963.8 0.81613 0.00057978 -0.27471 -0.00019515 0.54142 0.00038463 710.401296564851 715.405268602769 89.252 0.86031 89.252 88.856 89.716 -7.6294E-06 303 56 8 0 0 0 2.0984E-06 2 49300 106.49 106.49 1 3.2034 2.6609 0 21184000 3937400 17246000 2953 1569;1864 1077 1110 4662;4663 4663 AQSLVISPPAPSPR 14 0 1 Unmodified _AQSLVISPPAPSPR_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 715.4057 2 710.401358 1418.78816 NaN NaN NaN -0.14441 -0.00010259 NaN NaN NaN NaN 89.197 0.97176 89.197 88.78 89.751 0 0 0 0 0.001745 1 48279 68.515 57.364 1 NaN NaN 0 12687000 0 12687000 2954 1569;1864 1077 1110 4664 4664 AQSYDIQAWK 10 1 0 Unmodified _AQSYDIQAWK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.3061 2 605.29857 1208.58259 76902.87 0.753 0.00045579 0.34748 0.00021033 1.1005 0.00066612 605.298830886367 609.305615707652 65.533 0.78404 65.533 65.29 66.074 0 301 72 5 0 0 0 3.7945E-08 2 37744 118.26 112.16 1 0.70734 0.76747 0 45464000 26510000 18954000 2955 1942 1078 1111 4665;4666 4666 AQSYDIQAWK 10 1 0 Unmodified _AQSYDIQAWK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.306 2 605.29857 1208.58259 77518.71 0.44341 0.00026839 0.40568 0.00024556 0.84909 0.00051395 605.298839258059 609.305705364823 64.312 0.80951 64.312 64.076 64.886 0 297 73 5 0 0 0 8.3436E-09 2 37952 124.23 124.23 1 0.73775 0.76749 0 33785000 20061000 13724000 2956 1942 1078 1111 4667;4668 4668 AQSYDIQAWK 10 1 0 Unmodified _AQSYDIQAWK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 609.3062 2 605.29857 1208.58259 75632.65 0.50817 0.0003076 0.11514 6.9692E-05 0.62331 0.00037729 605.298927200615 609.305405581616 75.622 0.91312 75.622 75.276 76.189 0 309 63 8 0 0 0 0.020014 1 40138 46.819 42.206 1 1.34 1.0742 0 7453600 3180300 4273400 2957 1942 1078 1111 4669 4669 AQSYDIQAWK 10 1 0 Unmodified _AQSYDIQAWK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.2993 2 605.29857 1208.58259 75608.34 0.38392 0.00023239 0.47724 0.00028887 0.86116 0.00052126 605.299303623822 609.305597823703 76.068 0.82539 76.068 75.619 76.444 0 244 54 6 0 0 0 0.0098227 1 39715 54.191 44.28 1 1.3697 1.1198 0 5557500 2485200 3072300 2958 1942 1078 1111 4670 4670 AQTAHIVLEDGTK 13 1 0 Unmodified _AQTAHIVLEDGTK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209;Q5R207;Q5R211;C9JTA4;E7EWJ3;Q05CV6 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.8754 2 691.867348 1381.72014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.51 1 35.51 35.01 36.01 0 0 0 0 0.0079532 1 17874 55.604 44.774 1 2959 148 1079 1112 4671 4671 AQTAHIVLEDGTK 13 1 0 Unmodified _AQTAHIVLEDGTK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209;Q5R207;Q5R211;C9JTA4;E7EWJ3;Q05CV6 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.8734 2 691.867348 1381.72014 NaN NaN NaN -1.3225 -0.00091497 NaN NaN NaN NaN 34.295 0.13059 34.295 34.214 34.345 0 0 0 0 0.0011084 1 17353 77.644 55.003 1 NaN NaN 0 5592600 0 5592600 2960 148 1079 1112 4672 4672 AQTAHIVLEDGTK 13 1 0 Unmodified _AQTAHIVLEDGTK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209;Q5R207;Q5R211;C9JTA4;E7EWJ3;Q05CV6 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.8698 2 691.867348 1381.72014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.332 1 34.332 33.832 34.832 0 0 0 0 0.0011663 1 17372 76.326 39.632 1 2961 148 1079 1112 4673 4673 AQTEGINISEEALNHLGEIGTK 22 1 0 Unmodified _AQTEGINISEEALNHLGEIGTK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5;J3QLR1 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.4024 3 775.395799 2323.16557 68120.73 0.86124 0.0006678 -0.099431 -7.7098E-05 0.76181 0.0005907 775.730082791641 778.401492622238 104.74 0.80591 104.74 104.33 105.13 0 509 66 11 0 0 0 3.3482E-09 2 64647 68.88 68.88 1 0.80774 0.90944 0 122050000 64662000 57388000 2962 1076 1080 1113 4674;4675 4675 AQTEGINISEEALNHLGEIGTK 22 1 0 Unmodified _AQTEGINISEEALNHLGEIGTK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5;J3QLR1 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.7304 3 775.395799 2323.16557 67772.89 0.54373 0.0004216 0.13624 0.00010564 0.67997 0.00052724 775.730245842727 778.401706816535 103.87 0.7919 103.87 103.45 104.24 7.6294E-06 535 68 11 0 0 0 3.1958E-59 3 65637 147.21 147.21 1 0.84003 0.95029 0 133150000 74249000 58904000 2963 1076 1080 1113 4676;4677;4678 4677 AQTEGINISEEALNHLGEIGTK 22 1 0 Unmodified _AQTEGINISEEALNHLGEIGTK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5;J3QLR1 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.7312 3 775.395799 2323.16557 68406.2 0.86864 0.00067354 -0.092333 -7.1594E-05 0.77631 0.00060195 775.730058812757 778.401380492551 116.18 0.6544 116.18 115.93 116.58 0 190 28 13 0 0 0 6.0993E-06 2 68108 38.933 38.933 1 1.1342 0.96718 0 64637000 29764000 34872000 2964 1076 1080 1113 4679;4680 4680 AQTEGINISEEALNHLGEIGTK 22 1 0 Unmodified _AQTEGINISEEALNHLGEIGTK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5;J3QLR1 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.7321 3 775.395799 2323.16557 68543.61 0.98326 0.00076242 0.030617 2.3741E-05 1.0139 0.00078616 775.730203065291 778.401394458269 116.02 0.52118 116.02 115.78 116.3 0 205 25 13 0 0 0 2.4379E-09 2 67053 72.033 72.033 1 1.1745 0.99822 0 76082000 35990000 40092000 2965 1076 1080 1113 4681;4682 4682 AQTGAPCLSFDIVR 14 0 1 Unmodified _AQTGAPCLSFDIVR_ 0 0 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.3884 2 767.887758 1533.76096 68579.05 0.97932 0.000752 -0.65662 -0.00050421 0.32269 0.00024779 767.887415289018 772.89185710111 101.85 0.69304 101.85 101.5 102.19 -7.6294E-06 300 54 7 0 0 0 6.5445E-05 1 62560 90.731 73.295 1 0.70333 0.71703 0 27013000 15046000 11967000 2966 1922 1081 1114 4683 4683 AQTGAPCLSFDIVR 14 0 1 Unmodified _AQTGAPCLSFDIVR_ 0 0 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.8925 2 767.887758 1533.76096 69489.84 0.65862 0.00050575 -0.32635 -0.0002506 0.33227 0.00025515 767.887811257948 772.891972598126 101.14 0.67619 101.14 100.8 101.48 0 296 53 8 0 0 0 5.7376E-05 2 63552 91.961 76.989 1 0.72096 0.82753 0 52183000 29654000 22529000 2967 1922 1081 1114 4684;4685 4685 AQTGAPCLSFDIVR 14 0 1 Unmodified _AQTGAPCLSFDIVR_ 0 0 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.8914 2 767.887758 1533.76096 NaN NaN NaN -0.59413 -0.00045622 NaN NaN NaN NaN 114.09 0.52615 114.09 113.82 114.35 0 0 0 0 0.004684 1 66555 57.802 42.23 1 NaN NaN 0 6547100 0 6547100 2968 1922 1081 1114 4686 4686 AQTGAPCLSFDIVR 14 0 1 Unmodified _AQTGAPCLSFDIVR_ 0 0 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.3894 2 767.887758 1533.76096 69763.61 0.84814 0.00065128 -0.31574 -0.00024245 0.5324 0.00040882 767.887514247849 772.8918200967 113.99 0.62615 113.99 113.59 114.22 0 146 28 9 0 0 0 0.00038161 2 65494 61.235 45.969 1 0.7693 0.62586 0 12416000 6982200 5433500 2969 1922 1081 1114 4687;4688 4687 AQTLPTSVVTITSESSPGK 19 1 0 Unmodified _AQTLPTSVVTITSESSPGK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.0121 2 952.00457 1901.99459 NaN NaN NaN -0.51167 -0.00048711 NaN NaN NaN NaN 89.497 0.16364 89.497 89.387 89.551 0 0 0 0 2.789E-09 1 55273 80.706 72.401 1 NaN NaN 0 4404200 0 4404200 2970 415 1082 1115 4689 4689 AQTSLESQFTDRYPDNLK 18 1 1 Unmodified _AQTSLESQFTDRYPDNLK_ 0 0 1 Q9P031;F8VNY5 Q9P031 Q9P031 CCDC59 Thyroid transcription factor 1-associated protein 26 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.0118 3 705.011397 2112.01236 72597.91 0.55741 0.00039298 0.38014 0.000268 0.93755 0.00066098 705.345867575552 711.35323485043 87.031 0.5193 87.031 86.84 87.359 0 173 30 9 0 0 0 3.0326E-05 1 46983 53.278 53.278 1 1.3656 1.1456 0 6430000 3017100 3412900 2971 2090 1083 1116 4690 4690 AQTTAQASTPGQPPPQPQAPSHAAGQSALPQR 32 0 1 Unmodified _AQTTAQASTPGQPPPQPQAPSHAAGQSALPQR_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1060.201 3 1059.53257 3175.57589 60737.09 0.80239 0.00085016 0.097744 0.00010356 0.90013 0.00095372 1059.86655744945 1063.20362076652 47.332 0.18982 47.332 47.248 47.437 0 38 15 5 0 0 0 0.023233 1 25664 14.192 14.192 1 0.683 0.71584 0 12373000 7009600 5363300 2972 1977 1084 1117 4691 4691 AQTTAQASTPGQPPPQPQAPSHAAGQSALPQR 32 0 1 Unmodified _AQTTAQASTPGQPPPQPQAPSHAAGQSALPQR_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1060.2017 3 1059.53257 3175.57589 NaN NaN NaN 0.41479 0.00043948 NaN NaN NaN NaN 46.18 0.26961 46.18 46.033 46.303 0 0 0 0 0.00097326 2 25427 29.859 24.258 1 NaN NaN 0 8796900 8796900 0 2973 1977 1084 1117 4692;4693 4692 AQTTAQASTPGQPPPQPQAPSHAAGQSALPQR 32 0 1 Unmodified _AQTTAQASTPGQPPPQPQAPSHAAGQSALPQR_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1063.204 3 1059.53257 3175.57589 59281.52 0.20838 0.00022079 0.099506 0.00010543 0.30789 0.00032622 1060.20066838602 1063.20291230261 55.542 0.40451 55.542 55.348 55.753 3.8147E-06 121 24 7 0 0 0 0.023784 1 27839 13.948 13.948 1 1.2783 1.09 0 2803800 1035700 1768100 2974 1977 1084 1117 4694 4694 AQTVTDSMFAVASK 14 1 0 Oxidation (M) _AQTVTDSM(ox)FAVASK_ AQTVTDSM(1)FAVASK AQTVTDSM(57.84)FAVASK 0 1 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.3586 2 736.358499 1470.70244 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.14 1 50.14 49.64 50.64 3.8147E-06 0 0 0 0.0013645 1 28308 57.836 40.4 1 2975 641 1085 1118 4695 4695 498 AQTVTDSMFAVASK 14 1 0 Oxidation (M) _AQTVTDSM(ox)FAVASK_ AQTVTDSM(1)FAVASK AQTVTDSM(81.92)FAVASK 0 1 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.3657 2 736.358499 1470.70244 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.797 1 50.797 50.297 51.297 0 0 0 0 0.00024782 1 28709 81.92 66.348 1 2976 641 1085 1118 4696 4696 498 AQVADVVVSR 10 0 1 Unmodified _AQVADVVVSR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2943 2 522.29583 1042.57711 85404.72 0.65106 0.00034004 -0.30707 -0.00016038 0.34399 0.00017966 522.295155663962 527.29994812878 45.078 0.62937 45.078 44.72 45.35 0 153 56 5 0 0 0 0.0035438 1 24327 64.04 32.967 1 1.687 1.714 0 27694000 12544000 15150000 2977 587 1086 1119 4697 4697 AQVADVVVSR 10 0 1 Unmodified _AQVADVVVSR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.2999 2 522.29583 1042.57711 85091.06 0.56155 0.0002933 -0.30294 -0.00015822 0.25862 0.00013507 522.294721430189 527.299899666557 44.228 0.46534 44.228 44.029 44.494 0 156 41 5 0 0 0 0.00069328 3 24146 82.749 41.72 1 1.7637 1.9453 0 41424000 16645000 24779000 2978 587 1086 1119 4698;4699;4700 4698 AQVADVVVSR 10 0 1 Unmodified _AQVADVVVSR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.2958 2 522.29583 1042.57711 84638.37 -0.012008 -6.2717E-06 0.23383 0.00012213 0.22182 0.00011586 522.295601011182 527.300255533743 51.761 0.52042 51.761 51.517 52.037 0 113 42 4 0 0 0 0.043564 1 25601 37.344 15.258 1 0.89182 0.77466 0 2235500 1169800 1065700 2979 587 1086 1119 4701 4701 AQVADVVVSR 10 0 1 Unmodified _AQVADVVVSR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.2957 2 522.29583 1042.57711 84660.87 0.1217 6.3562E-05 0.22475 0.00011739 0.34645 0.00018095 522.295826585123 527.300137911907 52.132 0.53584 52.132 51.857 52.392 0 107 40 4 0 0 0 0.02362 1 25205 45.368 18.984 1 0.6362 0.57015 0 1989500 988520 1001000 2980 587 1086 1119 4702 4702 AQVEQELTTLR 11 0 1 Unmodified _AQVEQELTTLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.3496 2 644.348791 1286.68303 76293.59 0.90725 0.00058458 -0.24052 -0.00015498 0.66673 0.00042961 644.348739793875 649.352876252291 67.936 0.56722 67.936 67.681 68.248 0 219 48 6 0 0 0 7.8874E-05 2 39281 98.048 92.013 1 1.3221 1.349 0 26849000 11740000 15110000 2981 1754 1087 1120 4703;4704 4704 AQVEQELTTLR 11 0 1 Unmodified _AQVEQELTTLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.3502 2 644.348791 1286.68303 NaN NaN NaN 0.4127 0.00026592 NaN NaN NaN NaN 66.749 0.44442 66.749 66.545 66.99 0 0 0 0 6.3512E-05 1 39399 97.456 77.127 1 NaN NaN 0 15898000 15898000 0 2982 1754 1087 1120 4705 4705 AQVFSCPACR 10 0 1 Unmodified _AQVFSCPACR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.2759 2 598.270975 1194.5274 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.496 1 36.496 35.996 36.996 0 0 0 0 0.034878 1 18457 48.794 33.132 1 2983 406 1088 1121 4706 4706 AQVFSCPACR 10 0 1 Unmodified _AQVFSCPACR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.2708 2 598.270975 1194.5274 78748.85 0.41699 0.00024947 -0.22136 -0.00013244 0.19563 0.00011704 598.271024681689 603.275193877485 41.301 0.57775 41.301 41.104 41.682 0 157 44 5 0 0 0 0.0061058 2 19239 59.245 56.393 1 0.80561 0.68263 0 5044300 2722700 2321600 2984 406 1088 1121 4707;4708 4708 AQVFSCPACR 10 0 1 Unmodified _AQVFSCPACR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.2712 2 598.270975 1194.5274 78155.75 0.30951 0.00018517 0.0043685 2.6135E-06 0.31388 0.00018779 598.270964272307 603.275152353501 41.541 0.60439 41.541 41.239 41.844 0 163 44 5 0 0 0 0.007051 1 18765 57.96 55.108 1 0.68059 0.57843 0 2972500 1697100 1275400 2985 406 1088 1121 4709 4709 AQVIYTR 7 0 1 Unmodified _AQVIYTR_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.742 2 425.742702 849.470852 92225.66 -0.16249 -6.9178E-05 0.3261 0.00013883 0.16361 6.9654E-05 425.742638939271 430.746976448471 27.13 0.5209 27.13 26.946 27.467 0 140 26 8 0 0 0 0.00014144 2 12328 148.54 116.07 1 1.1269 1.3133 0 191190000 92651000 98537000 2986 1649 1089 1122 4710;4711 4710 AQVIYTR 7 0 1 Unmodified _AQVIYTR_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7424 2 425.742702 849.470852 91057.86 0.13464 5.7323E-05 0.38888 0.00016556 0.52352 0.00022289 425.742834821229 430.746818572412 26.72 0.47899 26.72 26.555 27.034 0 118 22 9 0 0 0 0.006225 1 12054 130.77 100.96 1 1.0511 1.2164 0 274280000 128370000 145910000 2987 1649 1089 1122 4712 4712 AQVQLQLFK 9 1 0 Unmodified _AQVQLQLFK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;Q68EN4;H0Y7K8;Q5H934 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.8192 2 537.818941 1073.62333 NaN NaN NaN -1.3439 -0.00072275 NaN NaN NaN NaN 86.737 0.74026 86.737 86.215 86.955 0 0 0 0 0.019957 1 53295 58.917 26.077 1 NaN NaN 0 14102000 14102000 0 2988 1739 1090 1123 4713 4713 AQVSLLIR 8 0 1 Unmodified _AQVSLLIR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.2859 2 450.287277 898.560001 94927.5 0.19581 8.8169E-05 0.72107 0.00032469 0.91687 0.00041286 450.287176433844 455.291816370476 73.956 1.5147 73.956 73.726 75.241 0 439 129 6 0 0 0 0.001025 4 43313 114.78 63.817 1 1.5567 1.7335 0 80336000 27634000 52701000 2989 1328 1091 1124 4714;4715;4716;4717 4714 AQVSLLIR 8 0 1 Unmodified _AQVSLLIR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.287 2 450.287277 898.560001 94296.99 0.16757 7.5455E-05 0.73892 0.00033273 0.90649 0.00040818 450.287258438904 455.291783002468 72.501 1.0391 72.501 72.268 73.307 0 335 89 6 0 0 0 0.0010332 2 43441 113.7 62.73 1 1.4811 1.6855 0 126890000 51813000 75074000 2990 1328 1091 1124 4718;4719 4718 AQVYVPLK 8 1 0 Unmodified _AQVYVPLK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2833 2 459.276378 916.538203 88760.85 0.20103 9.2327E-05 -0.85499 -0.00039268 -0.65396 -0.00030035 459.275815673105 463.283116726388 60.107 0.39888 60.107 59.896 60.295 0 104 26 6 0 0 0 0.038748 1 35005 47.849 33.184 1 1.1099 1.1998 0 21950000 10164000 11785000 2991 696 1092 1125 4720 4720 AQYDELAR 8 0 1 Unmodified _AQYDELAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2419 2 483.237981 964.461409 85917.15 0.43976 0.00021251 0.17828 8.6151E-05 0.61803 0.00029866 483.238043035861 488.242086664924 32.073 1.0089 32.073 31.586 32.595 0 543 94 8 0 0 0 0.024726 1 15655 55.676 7.8275 1 0.96561 1.1432 0 382210000 188890000 193320000 2992 316 1093 1126 4721 4721 AQYDELAR 8 0 1 Unmodified _AQYDELAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.2423 2 483.237981 964.461409 86257.93 0.27453 0.00013266 -0.40916 -0.00019772 -0.13463 -6.5059E-05 483.237811402924 488.24177909637 31.355 0.86283 31.355 30.977 31.84 -1.9073E-06 418 76 9 0 0 0 0.0092533 1 15327 75.109 8.0772 1 0.98669 1.1554 0 683150000 362940000 320210000 2993 316 1093 1126 4722 4722 AQYDELAR 8 0 1 Unmodified _AQYDELAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.2381 2 483.237981 964.461409 87109.97 -0.0177 -8.5533E-06 0.24648 0.00011911 0.22878 0.00011056 483.238044315213 488.242148621211 36.319 1.2656 36.319 35.852 37.117 -3.8147E-06 486 110 6 0 0 0 0.04634 3 16580 45.081 7.523 1 1.3015 1.0609 0 15181000 6892000 8288800 2994 316 1093 1126 4723;4724;4725 4725 AQYEDIANR 9 0 1 Unmodified _AQYEDIANR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__O95678;O95678;CON__Q8BGZ7 CON__P05787;CON__O95678;CON__Q8BGZ7 CON__P05787 KRT8;KRT75 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.2592 2 540.259445 1078.50434 81408.96 0.96007 0.00051869 -0.15874 -8.576E-05 0.80133 0.00043293 540.259397191308 545.263443353206 28.692 0.51084 28.692 28.513 29.023 0 174 27 10 0 0 0 0.00063538 2 13535 96.492 73.449 1 1.0667 1.2654 0 656730000 317730000 339000000 + 2995 1156;1147;1180 1094 1127 4726;4727 4726 AQYEDIANR 9 0 1 Unmodified _AQYEDIANR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__O95678;O95678;CON__Q8BGZ7 CON__P05787;CON__O95678;CON__Q8BGZ7 CON__P05787 KRT8;KRT75 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.2593 2 540.259445 1078.50434 81297.55 0.49587 0.0002679 -0.21278 -0.00011496 0.28308 0.00015294 540.259415670876 545.263428417501 28.045 0.4735 28.045 27.854 28.328 -1.9073E-06 159 24 11 0 0 0 7.7188E-06 2 13178 129.68 97.555 1 1.0775 1.2667 0 942580000 454180000 488400000 + 2996 1156;1147;1180 1094 1127 4728;4729 4728 AQYEDIANR 9 0 1 Unmodified _AQYEDIANR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__O95678;O95678;CON__Q8BGZ7 CON__P05787;CON__O95678;CON__Q8BGZ7 CON__P05787 KRT8;KRT75 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.2632 2 540.259445 1078.50434 81416.04 0.36246 0.00019582 0.11079 5.9853E-05 0.47325 0.00025568 540.259574476472 545.263560858134 32.665 0.38309 32.665 32.513 32.896 0 123 18 10 0 0 0 0.00063538 2 14128 96.492 80.018 1 1.7613 1.5193 0 77242000 27270000 49973000 + 2997 1156;1147;1180 1094 1127 4730;4731 4731 AQYEDIANR 9 0 1 Unmodified _AQYEDIANR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__O95678;O95678;CON__Q8BGZ7 CON__P05787;CON__O95678;CON__Q8BGZ7 CON__P05787 KRT8;KRT75 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.2595 2 540.259445 1078.50434 80973.27 0.47541 0.00025684 0.045121 2.4377E-05 0.52053 0.00028122 540.259326209428 545.26354714456 32.839 0.28406 32.839 32.655 32.939 0 63 11 9 0 0 0 0.00034507 2 13741 101.33 75.388 1 1.8011 1.5719 0 75261000 27170000 48090000 + 2998 1156;1147;1180 1094 1127 4732;4733 4733 AQYEDIAQK 9 1 0 Unmodified _AQYEDIAQK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.2648 2 533.264196 1064.51384 NaN NaN NaN -0.12367 -6.5951E-05 NaN NaN NaN NaN 30.494 0.90961 30.494 30.185 31.095 0 0 0 0 0.042582 1 12053 49.418 25.263 1 NaN NaN 0 101730000 101730000 0 + 2999 1308;1309 1095 1128 4734 4734 AQYEEIANR 9 0 1 Unmodified _AQYEEIANR_ 0 0 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;H0YIN9 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.2676 2 547.26727 1092.51999 NaN NaN NaN -0.065989 -3.6114E-05 NaN NaN NaN NaN 28.379 0.35664 28.379 28.183 28.54 0 0 0 0 7.1009E-25 1 13304 166.68 58.591 1 NaN NaN 0 62617000 62617000 0 + 3000 1162 1096 1129 4735 4735 AQYEEIANR 9 0 1 Unmodified _AQYEEIANR_ 0 0 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;H0YIN9 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.2676 2 547.26727 1092.51999 NaN NaN NaN -0.13439 -7.3547E-05 NaN NaN NaN NaN 27.729 0.33042 27.729 27.558 27.889 0 0 0 0 1.3909E-71 1 12970 215.39 76.565 1 NaN NaN 0 71766000 71766000 0 + 3001 1162 1096 1129 4736 4736 AQYEEIANR 9 0 1 Unmodified _AQYEEIANR_ 0 0 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;H0YIN9 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.2669 2 547.26727 1092.51999 NaN NaN NaN 0.11094 6.0715E-05 NaN NaN NaN NaN 32.32 0.44252 32.32 32.09 32.532 0 0 0 0 0.015327 1 13842 62.546 15.464 1 NaN NaN 0 19158000 19158000 0 + 3002 1162 1096 1129 4737 4737 AQYEEIAQR 9 0 1 Unmodified _AQYEEIAQR_ 0 0 0 CON__P35908;P35908;Q01546;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P35908;B2R853;CON__P04259 CON__P35908 KRT2;KRT76;KRT6C;KRT6A Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.2756 2 554.275095 1106.53564 NaN NaN NaN 0.06177 3.4237E-05 NaN NaN NaN NaN 29.046 0.23217 29.046 28.942 29.174 0 0 0 0 0.0017257 1 13957 84.568 42.915 1 NaN NaN 0 221580000 221580000 0 + 3003 1166;859;1154 1097 1130 4738 4738 AQYEEIAQR 9 0 1 Unmodified _AQYEEIAQR_ 0 0 0 CON__P35908;P35908;Q01546;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P35908;B2R853;CON__P04259 CON__P35908 KRT2;KRT76;KRT6C;KRT6A Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.2756 2 554.275095 1106.53564 NaN NaN NaN 0.35424 0.00019635 NaN NaN NaN NaN 28.251 0.40229 28.251 28.149 28.551 0 0 0 0 2.2264E-11 1 13452 138.54 102.66 1 NaN NaN 0 140080000 140080000 0 + 3004 1166;859;1154 1097 1130 4739 4739 AQYEEIAQR 9 0 1 Unmodified _AQYEEIAQR_ 0 0 0 CON__P35908;P35908;Q01546;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P35908;B2R853;CON__P04259 CON__P35908 KRT2;KRT76;KRT6C;KRT6A Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.2751 2 554.275095 1106.53564 NaN NaN NaN 0.047708 2.6443E-05 NaN NaN NaN NaN 33.005 0.65291 33.005 32.841 33.494 -3.8147E-06 0 0 0 2.6362E-11 1 14361 137.62 96.393 1 NaN NaN 0 31676000 31676000 0 + 3005 1166;859;1154 1097 1130 4740 4740 AQYEEIAQR 9 0 1 Unmodified _AQYEEIAQR_ 0 0 0 CON__P35908;P35908;Q01546;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P35908;B2R853;CON__P04259 CON__P35908 KRT2;KRT76;KRT6C;KRT6A Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.2753 2 554.275095 1106.53564 NaN NaN NaN -0.17067 -9.4601E-05 NaN NaN NaN NaN 33.332 0.52359 33.332 33.08 33.604 -3.8147E-06 0 0 0 0.0085335 1 14091 67.993 42.256 1 NaN NaN 0 21194000 21194000 0 + 3006 1166;859;1154 1097 1130 4741 4741 ARDINTEQGQNVLEILQDCFEEK 23 1 1 Unmodified _ARDINTEQGQNVLEILQDCFEEK_ 0 0 1 Q03188 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 923.1179 3 917.108101 2748.30247 63893.55 1.0533 0.00096596 0.014639 1.3426E-05 1.0679 0.00097939 917.442792544145 923.115780027168 132.55 0.35553 132.55 132.36 132.71 0 85 15 9 0 0 0 0.0016237 1 80589 27.554 27.554 1 1.3426 1.1097 0 4034600 1760600 2273900 3007 1681 1098 1131 4742 4742 ARDINTEQGQNVLEILQDCFEEK 23 1 1 Unmodified _ARDINTEQGQNVLEILQDCFEEK_ 0 0 1 Q03188 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 923.785 3 917.108101 2748.30247 64020.03 1.001 0.00091807 0.17572 0.00016116 1.1768 0.0010792 917.776591856267 923.783808254987 132.22 0.33778 132.22 132.07 132.41 0 59 14 7 0 0 0 0.050725 1 79468 13.896 11.247 1 0.99295 0.84851 0 2843300 1125500 1717800 3008 1681 1098 1131 4743 4743 ARENIPTDR 9 0 2 Unmodified _ARENIPTDR_ 0 0 1 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.856 3 357.856233 1070.54687 97910.75 0.11799 4.2224E-05 0.13175 4.7149E-05 0.24974 8.9372E-05 357.856238828035 364.528394580784 17.63 0.24462 17.63 17.535 17.78 0 26 8 5 0 0 0 0.01032 1 4773 40.994 31.106 1 0.77896 0.87766 0 5268600 3572900 1695700 3009 1418 1099 1132 4744 4744 ARENPSEEAQNLVEFTDEEGYGR 23 0 2 Unmodified _ARENPSEEAQNLVEFTDEEGYGR_ 0 0 1 Q53HM6;B3KY12;A8K7V1;A8K566;Q12874;B4DW90 Q53HM6 Q53HM6 SF3A3 Splicing factor 3A subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.7372 3 880.731799 2639.17357 67691.34 0.54326 0.00047847 0.41614 0.00036651 0.9594 0.00084498 880.730997388133 887.738460990692 89.704 0.079758 89.704 89.666 89.746 0 13 6 4 0 0 0 0.0039344 1 55422 23.913 21.071 1 NaN NaN 0 8992500 4467200 4525300 3010 747 1100 1133 4745 4745 ARFEELCSDLFR 12 0 2 Unmodified _ARFEELCSDLFR_ 0 0 1 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.5896 3 514.917164 1541.72966 87333.54 0.99785 0.00051381 -0.17024 -8.7662E-05 0.8276 0.00042615 515.251132664237 521.589409300299 91.073 0.46105 91.073 90.897 91.358 7.6294E-06 71 37 4 0 0 0 0.03979 1 55095 19.754 17.987 1 0.89982 0.98765 0 12429000 7879300 4549800 3011 533;845 1101 1134 4746 4746 ARFEELNADLFR 12 0 2 Unmodified _ARFEELNADLFR_ 0 0 1 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.8918 2 740.88079 1479.74703 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.458 1 89.458 88.958 89.958 0 0 0 0 0.0083372 1 54009 68.355 46.892 1 3012 1467;1248 1102 1135 4747 4747 ARFEELNADLFR 12 0 2 Unmodified _ARFEELNADLFR_ 0 0 1 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.8902 2 740.88079 1479.74703 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.717 1 89.717 89.217 90.217 0 0 0 0 0.01985 1 54158 63.408 46.737 1 3013 1467;1248 1102 1135 4748 4748 ARFEELNADLFR 12 0 2 Unmodified _ARFEELNADLFR_ 0 0 1 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.928 3 494.256285 1479.74703 85544.45 0.43005 0.00021255 -1.6034 -0.0007925 -1.1734 -0.00057994 494.256495774503 501.261051051787 87.821 0.93643 87.821 87.127 88.064 0 304 74 6 0 0 0 8.641E-05 2 53856 63.76 57.074 1 1.611 1.8724 0 87049000 26799000 60250000 3014 1467;1248 1102 1135 4749;4750 4749 ARFEELNADLFR 12 0 2 Unmodified _ARFEELNADLFR_ 0 0 1 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.9272 3 494.256285 1479.74703 83841 0.10615 5.2467E-05 -0.40716 -0.00020124 -0.30101 -0.00014878 494.25590401672 500.928223703553 100.99 0.71902 100.99 100.72 101.44 0 259 49 8 0 0 0 0.0009536 2 57081 50.562 50.562 1 1.3009 1.0857 0 15817000 6915900 8900800 3015 1467;1248 1102 1135 4751;4752 4751 ARFEELNADLFR 12 0 2 Unmodified _ARFEELNADLFR_ 0 0 1 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.8898 2 740.88079 1479.74703 69351.84 0.54553 0.00040418 0.2102 0.00015573 0.75573 0.00055991 740.880942650432 750.889234976349 101.03 0.9455 101.03 100.67 101.62 0 283 63 7 0 0 0 0.025264 2 57121 65.241 47.377 1 1.5012 1.2408 0 22977000 10602000 12375000 3016 1467;1248 1102 1135 4753;4754 4753 ARFEELNADLFR 12 0 2 Unmodified _ARFEELNADLFR_ 0 0 1 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.5896 3 494.256285 1479.74703 85572.21 0.067825 3.3523E-05 -0.49233 -0.00024334 -0.42451 -0.00020981 494.255832840904 500.928184932511 100.73 0.62444 100.73 100.46 101.08 7.6294E-06 266 45 8 0 0 0 2.6001E-08 2 56121 112.73 112.73 1 1.3524 1.2459 0 15380000 6739000 8640900 3017 1467;1248 1102 1135 4755;4756 4756 ARPADCVLCPNK 12 1 1 Unmodified _ARPADCVLCPNK_ 0 0 1 A0A024R4W4;A0A024R4V5;O95696;B4E3L9 A0A024R4W4 A0A024R4W4 BRD1 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8419 2 700.842296 1399.67004 75098 0.34224 0.00023986 -0.5849 -0.00040992 -0.24266 -0.00017007 700.841691651268 709.853554766921 27.664 0.33012 27.664 27.524 27.854 0 67 17 7 0 0 0 0.001191 2 12961 87.258 87.258 1 0.83734 0.95588 0 20792000 11272000 9519700 3018 162 1103 1136 4757;4758 4758 ARPADCVLCPNK 12 1 1 Unmodified _ARPADCVLCPNK_ 0 0 1 A0A024R4W4;A0A024R4V5;O95696;B4E3L9 A0A024R4W4 A0A024R4W4 BRD1 Bromodomain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.8541 2 700.842296 1399.67004 71698.27 0.42226 0.00029594 -0.032966 -2.3104E-05 0.38929 0.00027283 700.842044398566 709.854023374918 32.194 0.61696 32.194 31.999 32.616 0 113 30 7 0 0 0 0.024916 1 13761 53.028 53.028 1 2.0234 1.6747 0 3939600 1633000 2306600 3019 162 1103 1136 4759 4759 ARPFPDGLAEDIDK 14 1 1 Unmodified _ARPFPDGLAEDIDK_ 0 0 1 P13639;Q8TA90;B4DPU3;Q6W6M8;M0R0I6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.4033 2 772.391187 1542.76782 68994.84 0.52245 0.00040353 -0.082396 -6.3642E-05 0.44005 0.00033989 772.391411520158 781.402374861433 77.059 1.0835 77.059 76.478 77.561 0 345 92 6 0 0 0 0.00096645 1 45270 72.29 72.29 1 2.8145 3.2365 0 27219000 5291700 21927000 3020 1478 1104 1137 4760 4760 ARPFPDGLAEDIDK 14 1 1 Unmodified _ARPFPDGLAEDIDK_ 0 0 1 P13639;Q8TA90;B4DPU3;Q6W6M8;M0R0I6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.2633 3 515.263217 1542.76782 83654.7 0.28475 0.00014672 0.016398 8.4494E-06 0.30115 0.00015517 515.263244392498 521.270684034156 77.096 1.0893 77.096 76.518 77.607 0 470 92 6 0 0 0 0.0011988 1 45300 44.252 44.252 1 3.4249 4.1168 0 77809000 15836000 61972000 3021 1478 1104 1137 4761 4761 ARPFPDGLAEDIDK 14 1 1 Unmodified _ARPFPDGLAEDIDK_ 0 0 1 P13639;Q8TA90;B4DPU3;Q6W6M8;M0R0I6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.6055 3 515.263217 1542.76782 84198.49 0.36368 0.00018739 0.026822 1.382E-05 0.3905 0.00020121 515.263199156037 521.270674227694 75.496 0.99767 75.496 75.049 76.046 0 461 89 7 0 0 0 3.7925E-05 2 45342 74.789 74.789 1 3.2857 3.876 0 117230000 25640000 91588000 3022 1478 1104 1137 4762;4763 4762 ARPFPDGLAEDIDK 14 1 1 Unmodified _ARPFPDGLAEDIDK_ 0 0 1 P13639;Q8TA90;B4DPU3;Q6W6M8;M0R0I6 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.4025 2 772.391187 1542.76782 NaN NaN NaN 0.16473 0.00012723 NaN NaN NaN NaN 75.486 0.77133 75.486 75.153 75.924 0 0 0 0 0.00092705 1 45398 90.412 65.559 1 NaN NaN 0 35529000 0 35529000 3023 1478 1104 1137 4764 4764 ARPFPDGLAEDIDK 14 1 1 Unmodified _ARPFPDGLAEDIDK_ 0 0 1 P13639;Q8TA90;B4DPU3;Q6W6M8;M0R0I6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.6055 3 515.263217 1542.76782 86094.04 0.28097 0.00014477 -0.014134 -7.2827E-06 0.26684 0.00013749 515.263390314627 521.270590478587 87.668 0.75275 87.668 87.303 88.056 0 168 44 5 0 0 0 0.038326 1 47339 15.022 15.022 1 2.6586 2.2687 0 2933100 736430 2196600 3024 1478 1104 1137 4765 4765 ARPFPDGLAEDIDK 14 1 1 Unmodified _ARPFPDGLAEDIDK_ 0 0 1 P13639;Q8TA90;B4DPU3;Q6W6M8;M0R0I6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 781.4025 2 772.391187 1542.76782 71825.64 0.63302 0.00048894 -0.052046 -4.02E-05 0.58097 0.00044874 772.391139037404 781.402541028967 87.693 0.48297 87.693 87.416 87.899 0 109 28 6 0 0 0 0.0039302 1 47404 58.754 58.754 1 1.725 1.4845 0 1845700 517120 1328500 3025 1478 1104 1137 4766 4766 ARPFPDGLAEDIDKGEVSAR 20 1 2 Unmodified _ARPFPDGLAEDIDKGEVSAR_ 0 0 2 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.7845 4 536.524913 2142.07055 82858.53 0.32138 0.00017243 0.2227 0.00011949 0.54409 0.00029192 536.775735430695 543.532719813419 89.582 0.77131 89.582 89.21 89.982 0 158 48 5 0 0 0 0.024515 1 48670 20.596 20.596 1 2.3241 2.3099 0 2808900 713960 2094900 3026 1478 1105 1138 4767 4767 ARPNTVISQEPFVPK 15 1 1 Unmodified _ARPNTVISQEPFVPK_ 0 0 1 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.9804 3 561.645661 1681.91515 80799.3 0.53632 0.00030122 0.044241 2.4848E-05 0.58056 0.00032607 561.645670416347 567.653109548357 68.967 0.92198 68.967 68.428 69.35 0 436 81 7 0 0 0 0.010058 1 39770 22.803 19.078 1 0.75315 0.89966 0 52768000 29888000 22880000 3027 1837 1106 1139 4768 4768 ARPNTVISQEPFVPK 15 1 1 Unmodified _ARPNTVISQEPFVPK_ 0 0 1 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.6537 3 561.645661 1681.91515 81309.94 0.47791 0.00026842 -0.093273 -5.2387E-05 0.38464 0.00021603 561.645567824516 567.653091138173 66.942 0.79775 66.942 66.588 67.386 0 415 67 9 0 0 0 5.295E-11 3 39504 105.14 88.069 1 0.71222 0.83384 0 53404000 31564000 21840000 3028 1837 1106 1139 4769;4770;4771 4770 ARPNTVISQEPFVPK 15 1 1 Unmodified _ARPNTVISQEPFVPK_ 0 0 1 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.9759 2 841.964854 1681.91515 69369.18 0.52298 0.00044033 -0.34672 -0.00029193 0.17626 0.00014841 841.96426316409 850.976226408106 67.001 0.52235 67.001 66.691 67.213 0 156 45 4 0 0 0 0.026226 1 39488 38.021 15.823 1 0.83118 0.93726 0 14394000 8596200 5797500 3029 1837 1106 1139 4772 4772 ARPNTVISQEPFVPK 15 1 1 Unmodified _ARPNTVISQEPFVPK_ 0 0 1 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.6461 3 561.645661 1681.91515 80058.16 0.50794 0.00028528 0.2275 0.00012777 0.73544 0.00041306 561.980200638752 567.653190422831 78.295 0.73638 78.295 77.911 78.647 0 335 48 10 0 0 0 0.00010159 1 41972 51.193 40.535 1 1.338 1.168 0 23334000 10289000 13045000 3030 1837 1106 1139 4773 4773 ARPNTVISQEPFVPK 15 1 1 Unmodified _ARPNTVISQEPFVPK_ 0 0 1 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.6536 3 561.645661 1681.91515 80594.93 0.58657 0.00032945 -0.0015239 -8.5592E-07 0.58505 0.00032859 561.645638188002 567.653139909781 78.328 0.6815 78.328 77.997 78.678 0 301 44 10 0 0 0 2.9784E-07 2 41257 83.823 79.465 1 1.3413 1.1371 0 17165000 6964500 10200000 3031 1837 1106 1139 4774;4775 4775 ARPSQFPEQSSSAQQNAR 18 0 2 Unmodified _ARPSQFPEQSSSAQQNAR_ 0 0 1 B0AZS5;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.6564 3 663.655948 1987.94601 74566.09 0.69364 0.00046034 -0.03596 -2.3865E-05 0.65768 0.00043648 663.990008299144 670.662334167132 21.459 0.2735 21.459 21.352 21.626 0 64 14 7 0 0 0 4.0194E-06 1 7720 75.548 75.548 1 0.61355 0.67707 0 11457000 7746700 3710400 3032 804 1107 1140 4776 4776 ARPSQFPEQSSSAQQNAR 18 0 2 Unmodified _ARPSQFPEQSSSAQQNAR_ 0 0 1 B0AZS5;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.6558 3 663.655948 1987.94601 72064.28 0.57467 0.00038138 0.35066 0.00023272 0.92533 0.0006141 663.65560645968 670.328782726925 21.247 0.33267 21.247 21.111 21.444 0 65 15 6 0 0 0 6.6397E-23 2 7399 144.3 144.3 1 0.77457 0.80397 0 12912000 6217800 6693800 3033 804 1107 1140 4777;4778 4778 ARPSQFPEQSSSAQQNAR 18 0 2 Unmodified _ARPSQFPEQSSSAQQNAR_ 0 0 1 B0AZS5;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.9895 3 663.655948 1987.94601 75483.2 0.50329 0.00033401 0.18934 0.00012565 0.69263 0.00045967 663.656257419939 670.328236785953 23.836 0.25512 23.836 23.699 23.954 0 53 13 6 0 0 0 0.0079476 1 8215 17.819 16.948 1 1.0896 0.98989 0 2710400 1274100 1436400 3034 804 1107 1140 4779 4779 ARPSQFPEQSSSAQQNAR 18 0 2 Unmodified _ARPSQFPEQSSSAQQNAR_ 0 0 1 B0AZS5;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.3281 3 663.655948 1987.94601 75550.53 0.45458 0.00030168 -0.13533 -8.9816E-05 0.31924 0.00021187 663.655895057075 670.327986516986 23.924 0.3092 23.924 23.726 24.036 0 94 20 6 0 0 0 7.4235E-05 2 7752 34.174 34.174 1 1.1431 1.019 0 1581900 1027800 554130 3035 804 1107 1140 4780;4781 4781 ARPSVLWCYK 10 1 1 Unmodified _ARPSVLWCYK_ 0 0 1 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.3344 2 640.334433 1278.65431 NaN NaN NaN -0.17547 -0.00011236 NaN NaN NaN NaN 58.815 0.64042 58.815 58.661 59.302 0 0 0 0 1.805E-06 1 33367 107.15 85.69 1 NaN NaN 0 11520000 11520000 0 3036 2023;1687 1108 1141 4782 4782 ARPSVLWCYK 10 1 1 Unmodified _ARPSVLWCYK_ 0 0 1 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3352 2 640.334433 1278.65431 75582.4 0.54394 0.0003483 0.5316 0.0003404 1.0755 0.00068871 640.334705399313 649.345931646142 57.067 0.41192 57.067 56.853 57.265 -3.8147E-06 117 29 6 0 0 0 0.014348 1 32897 64.297 43.396 1 0.6368 0.73112 0 24738000 14430000 10308000 3037 2023;1687 1108 1141 4783 4783 ARPSVLWCYK 10 1 1 Unmodified _ARPSVLWCYK_ 0 0 1 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3351 2 640.334433 1278.65431 74247.01 0.5688 0.00036422 0.10539 6.7488E-05 0.6742 0.00043171 640.334484980874 649.345704833033 68.275 0.43709 68.275 68.083 68.52 -7.6294E-06 147 30 7 0 0 0 0.048162 1 35649 64.04 64.04 1 1.1577 0.98164 0 8556000 3631900 4924100 3038 2023;1687 1108 1141 4784 4784 ARPSVLWCYK 10 1 1 Unmodified _ARPSVLWCYK_ 0 0 1 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.3347 2 640.334433 1278.65431 75599.24 0.51571 0.00033022 0.21388 0.00013695 0.72958 0.00046718 640.33439309413 649.345883218755 68.512 0.51566 68.512 68.243 68.759 0 172 34 7 0 0 0 0.052354 2 34958 61.78 61.78 1 1.3458 1.1322 0 7540800 2860400 4680400 3039 2023;1687 1108 1141 4785;4786 4786 ARQEELYSELQAR 13 0 2 Unmodified _ARQEELYSELQAR_ 0 0 1 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.9136 2 796.904993 1591.79543 NaN NaN NaN 2.7197E-05 2.1673E-08 NaN NaN NaN NaN 51.647 0.47139 51.647 51.477 51.948 0 0 0 0 2.072E-13 2 28617 128.85 98.642 1 NaN NaN 0 13920000 0 13920000 3040 1754 1109 1142 4787;4788 4788 ARQEELYSELQAR 13 0 2 Unmodified _ARQEELYSELQAR_ 0 0 1 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.6053 3 531.605754 1591.79543 82579.73 0.99145 0.00052706 -0.12211 -6.4915E-05 0.86934 0.00046215 531.605487645228 538.277859102574 49.816 0.3877 49.816 49.628 50.015 0 167 32 8 0 0 0 6.7957E-05 2 28075 83.729 75.102 1 1.8954 2.1568 0 38043000 13532000 24511000 3041 1754 1109 1142 4789;4790 4790 ASAAPKPEPVPVQK 14 2 0 Unmodified _ASAAPKPEPVPVQK_ 0 0 1 B7Z8X5;Q4W5K9;A0A024RDE8;Q96HC4;H0Y929;A0A0D9SFR4;H0YBI4 B7Z8X5 B7Z8X5 LIM;PDLIM5 PDZ and LIM domain protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.9179 2 709.903734 1417.79291 NaN NaN NaN -0.072328 -5.1346E-05 NaN NaN NaN NaN 27.024 0.16123 27.024 26.926 27.087 0 0 0 0 0.03626 1 12401 64.439 45.999 1 NaN NaN 0 3890500 0 3890500 3042 1105 1110 1143 4791 4791 ASAEGPLLGPEAAPSGEGAGSK 22 1 0 Unmodified _ASAEGPLLGPEAAPSGEGAGSK_ 0 0 0 C9JQV0;Q9BRJ6 C9JQV0 C9JQV0 C7orf50 Uncharacterized protein C7orf50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 976.983 2 976.981626 1951.9487 63250.88 0.44305 0.00043285 -0.26289 -0.00025684 0.18016 0.00017601 977.48305913404 980.987636084439 65.996 0.4166 65.996 65.725 66.142 0 158 39 6 0 0 0 4.0102E-08 2 38012 70.529 56.565 1 0.804 0.81701 0 13762000 7287400 6474200 3043 1141 1111 1144 4792;4793 4793 ASAEGPLLGPEAAPSGEGAGSK 22 1 0 Unmodified _ASAEGPLLGPEAAPSGEGAGSK_ 0 0 0 C9JQV0;Q9BRJ6 C9JQV0 C9JQV0 C7orf50 Uncharacterized protein C7orf50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 980.9606 2 976.981626 1951.9487 63201.51 0.16704 0.00016319 -0.3588 -0.00035054 -0.19176 -0.00018735 976.98199830379 980.987668005247 64.846 0.59532 64.846 64.44 65.035 0 148 52 6 0 0 0 7.3555E-08 3 38266 64.52 57.15 1 0.94881 0.95481 0 16086000 6028900 10057000 3044 1141 1111 1144 4794;4795;4796 4796 ASAEGPLLGPEAAPSGEGAGSK 22 1 0 Unmodified _ASAEGPLLGPEAAPSGEGAGSK_ 0 0 0 C9JQV0;Q9BRJ6 C9JQV0 C9JQV0 C7orf50 Uncharacterized protein C7orf50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 977.4847 2 976.981626 1951.9487 62590.04 0.0056071 5.478E-06 0.24374 0.00023813 0.24934 0.00024361 976.981952897261 980.988973146003 75.953 0.53941 75.953 75.695 76.235 0 192 35 7 0 0 0 6.0598E-05 1 39594 39.685 39.685 1 0.56416 0.44091 0 3410900 2272300 1138600 3045 1141 1111 1144 4797 4797 ASAETPAEEQELLTQVCGDVLSTCEHR 27 0 1 Unmodified _ASAETPAEEQELLTQVCGDVLSTCEHR_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1011.1337 3 1010.79749 3029.37063 59823.94 0.92506 0.00093505 -1.243 -0.0012565 -0.31799 -0.00032142 1011.13130999787 1014.46735277298 110.44 0.4828 110.44 110.17 110.65 -7.6294E-06 201 35 9 0 0 0 2.542E-07 1 69290 47.745 45.887 1 0.69521 0.71081 0 31484000 16984000 14500000 3046 1565 1112 1145 4798 4798 ASAETPAEEQELLTQVCGDVLSTCEHR 27 0 1 Unmodified _ASAETPAEEQELLTQVCGDVLSTCEHR_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1010.7972 3 1010.79749 3029.37063 61079.06 0.55738 0.0005634 -0.68572 -0.00069313 -0.12834 -0.00012973 1011.13100771171 1014.46716150479 109.86 0.32757 109.86 109.67 110 -7.6294E-06 126 21 8 0 0 0 0.00055039 1 70565 28.023 28.023 1 0.70247 0.76495 0 29119000 15834000 13285000 3047 1565 1112 1145 4799 4799 ASAETPAEEQELLTQVCGDVLSTCEHR 27 0 1 Unmodified _ASAETPAEEQELLTQVCGDVLSTCEHR_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1014.4679 3 1010.79749 3029.37063 59672.61 0.52777 0.00053347 -0.61067 -0.00061726 -0.082897 -8.3792E-05 1011.13154540604 1014.46717622432 121.87 0.51139 121.87 121.67 122.18 7.6294E-06 177 25 12 0 0 0 3.3272E-16 2 72636 70.449 70.449 1 1.93 1.625 0 27766000 8830800 18935000 3048 1565 1112 1145 4800;4801 4801 ASAETPAEEQELLTQVCGDVLSTCEHR 27 0 1 Unmodified _ASAETPAEEQELLTQVCGDVLSTCEHR_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1011.4667 3 1010.79749 3029.37063 59933.23 0.49944 0.00050483 -0.62387 -0.00063061 -0.12443 -0.00012577 1011.13207237901 1014.46722549355 121.71 0.87332 121.71 121.34 122.22 7.6294E-06 208 45 12 0 0 0 0.00062328 1 71539 26.841 26.841 1 1.9772 1.7247 0 33258000 10740000 22517000 3049 1565 1112 1145 4802 4802 ASAFALQEQPVVNAVIDDTTK 21 1 0 Unmodified _ASAFALQEQPVVNAVIDDTTK_ 0 0 0 Q86TW7;Q86TQ8;Q6IBS5;A0A024R6C9;P36957 Q86TW7 Q86TW7 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1109.0724 2 1109.07352 2216.13248 59604.63 0.23682 0.00026265 0.52926 0.00058698 0.76608 0.00084963 1109.57534320254 1113.58361786856 116.82 0.28982 116.82 116.7 116.99 0 49 19 4 0 0 0 0.0057824 1 74634 25.322 25.322 1 0.94251 0.94387 0 7654600 4238300 3416300 3050 200 1113 1146 4803 4803 ASAFALQEQPVVNAVIDDTTK 21 1 0 Unmodified _ASAFALQEQPVVNAVIDDTTK_ 0 0 0 Q86TW7;Q86TQ8;Q6IBS5;A0A024R6C9;P36957 Q86TW7 Q86TW7 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1109.0754 2 1109.07352 2216.13248 60961.46 0.19125 0.00021212 0.28883 0.00032034 0.48009 0.00053245 1109.57513653646 1113.0811805108 116.37 0.2785 116.37 116.22 116.5 -7.6294E-06 52 17 5 0 0 0 3.3694E-07 2 76061 60.401 60.401 1 0.74487 0.75293 0 8681700 5357400 3324300 3051 200 1113 1146 4804;4805 4804 ASAGAEQTPGPLSQSPGLVK 20 1 0 Unmodified _ASAGAEQTPGPLSQSPGLVK_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.9976 2 947.997079 1893.97961 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.237 1 71.237 70.737 71.737 0 0 0 0 0.026935 1 42670 56.569 41.182 1 3052 898 1114 1147 4806 4806 ASAGHVAVSSPTPETGPLQR 20 0 1 Unmodified _ASAGHVAVSSPTPETGPLQR_ 0 0 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.344 3 654.672827 1960.99665 74910.78 1.2245 0.00080165 -0.18348 -0.00012012 1.041 0.00068153 654.672425007985 658.343221447299 49.947 0.3494 49.947 49.747 50.097 0 84 29 4 0 0 0 2.2479E-06 1 27528 31.917 26.257 1 1.1872 1.2543 0 40474000 17661000 22813000 3053 1565 1115 1148 4807 4807 ASAGHVAVSSPTPETGPLQR 20 0 1 Unmodified _ASAGHVAVSSPTPETGPLQR_ 0 0 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.3436 3 654.672827 1960.99665 75797.42 0.54629 0.00035764 0.11501 7.5291E-05 0.6613 0.00043293 655.007023623915 658.34337703733 58.473 0.43648 58.473 58.277 58.713 3.8147E-06 159 32 7 0 0 0 6.0273E-07 2 29105 45.138 45.138 1 1.6779 1.4294 0 2933900 1030100 1903800 3054 1565 1115 1148 4808;4809 4809 ASAPSPNAQVACDHCLK 17 1 0 Unmodified _ASAPSPNAQVACDHCLK_ 0 0 0 Q14258;Q59GW5 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.2877 3 609.282177 1824.8247 NaN NaN NaN -0.69858 -0.00042563 NaN NaN NaN NaN 33.322 0.24943 33.322 33.201 33.451 0 0 0 0 0.0015789 1 16553 50.178 44.015 1 NaN NaN 0 6107200 0 6107200 3055 1731;1802 1116 1149 4810 4810 ASAPSPNAQVACDHCLK 17 1 0 Unmodified _ASAPSPNAQVACDHCLK_ 0 0 0 Q14258;Q59GW5 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.9539 3 609.282177 1824.8247 NaN NaN NaN 0.23158 0.0001411 NaN NaN NaN NaN 32.583 0.2859 32.583 32.449 32.735 0 0 0 0 8.7262E-06 1 16211 77.191 67.27 1 NaN NaN 0 7750500 0 7750500 3056 1731;1802 1116 1149 4811 4811 ASASGSGAQVGGPISSGSSASSVTVTR 27 0 1 Unmodified _ASASGSGAQVGGPISSGSSASSVTVTR_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1183.0813 2 1183.08313 2364.15171 56006.59 0.06894 8.1562E-05 0.05263 6.2266E-05 0.12157 0.00014383 1183.58469578868 1188.08730937982 59.321 0.70745 59.321 58.962 59.67 0 444 54 11 0 0 0 1.5229E-18 2 33568 77.221 77.221 1 1.329 1.5267 0 140600000 59038000 81566000 3057 1440 1117 1150 4812;4813 4813 ASASGSGAQVGGPISSGSSASSVTVTR 27 0 1 Unmodified _ASASGSGAQVGGPISSGSSASSVTVTR_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1183.0847 2 1183.08313 2364.15171 56517.27 0.23123 0.00027357 0.030252 3.579E-05 0.26148 0.00030936 1183.58450780215 1188.5889125466 58.515 0.74173 58.515 58.129 58.871 -3.8147E-06 466 62 10 0 0 0 8.7539E-54 3 33837 139.9 139.9 1 1.2919 1.4706 0 111120000 45817000 65302000 3058 1440 1117 1150 4814;4815;4816 4816 ASASGSGAQVGGPISSGSSASSVTVTR 27 0 1 Unmodified _ASASGSGAQVGGPISSGSSASSVTVTR_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1183.0817 2 1183.08313 2364.15171 55962.32 -0.20956 -0.00024792 0.33703 0.00039874 0.12748 0.00015082 1183.58512701773 1188.58900294475 69.29 0.63258 69.29 68.977 69.61 0 338 42 12 0 0 0 0.0014757 1 36193 29.582 29.582 1 1.3674 1.1659 0 36779000 15697000 21082000 3059 1440 1117 1150 4817 4817 ASAVSELSPR 10 0 1 Unmodified _ASAVSELSPR_ 0 0 0 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.7771 2 508.772188 1015.52982 80999.32 0.22573 0.00011485 -0.15886 -8.0821E-05 0.066877 3.4025E-05 508.772489803626 513.776121305869 37.948 0.83544 37.948 37.561 38.396 0 211 65 7 0 0 0 4.3914E-06 2 19793 109.44 59.399 1 0.9566 1.088 0 118340000 59771000 58568000 3060 2128 1118 1151 4818;4819 4819 ASDFSLEASVAEMK 14 1 0 Oxidation (M) _ASDFSLEASVAEM(ox)K_ ASDFSLEASVAEM(1)K ASDFSLEASVAEM(45.88)K 0 1 0 Q4G1A1;A8K3X3;Q9H410;Q5JW53;Q5JW54;Q5JW57 Q4G1A1 Q4G1A1 DSN1 Kinetochore-associated protein DSN1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.849 2 750.847964 1499.68137 NaN NaN NaN 0.023576 1.7702E-05 NaN NaN NaN NaN 75.786 0.15262 75.786 75.688 75.841 0 0 0 0 0.0059688 1 44603 45.879 37.659 1 NaN NaN 0 3718700 3718700 0 3061 727 1119 1152 4820 4820 562 ASDGSFSLPLK 11 1 0 Unmodified _ASDGSFSLPLK_ 0 0 0 Q00653;A0A1P8C958;D3DR86 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.2955 2 561.295496 1120.57644 81916.31 0.94072 0.00052802 -1.2705 -0.00071313 -0.3298 -0.00018511 561.29514592366 565.302508037156 84.024 0.5043 84.024 83.669 84.173 0 117 42 5 0 0 0 0.0073711 1 51603 52.725 39.688 1 2.4463 2.4639 0 13441000 3663300 9777900 3062 1674 1120 1153 4821 4821 ASDLEDEESAAR 12 0 1 Unmodified _ASDLEDEESAAR_ 0 0 0 E7ERS3;B4DTK7;Q86VM9;H3BPD0;B4DZ24 E7ERS3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.7877 2 646.783678 1291.5528 80026.88 0.93228 0.00060298 -0.10839 -7.0108E-05 0.82388 0.00053287 646.783735807283 651.787484170986 25.935 0.20822 25.935 25.812 26.02 0 34 13 4 0 0 0 0.00044103 1 11414 70.942 52.63 1 0.59265 0.59779 0 6115000 3876800 2238200 3063 1033 1121 1154 4822 4822 ASDPGLPAEEPK 12 1 0 Unmodified _ASDPGLPAEEPK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.8018 2 605.801143 1209.58773 NaN NaN NaN 0.0062985 3.8156E-06 NaN NaN NaN NaN 39.601 0.37828 39.601 39.428 39.807 0 0 0 0 0.0015939 1 20539 76.282 53.752 1 NaN NaN 0 14002000 14002000 0 3064 1259 1122 1155 4823 4823 ASDPGLPAEEPK 12 1 0 Unmodified _ASDPGLPAEEPK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.8085 2 605.801143 1209.58773 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.54 1 39.54 39.04 40.04 0 0 0 0 0.041873 1 20521 43.512 30.459 1 3065 1259 1122 1155 4824 4824 ASDPGLPAEEPK 12 1 0 Unmodified _ASDPGLPAEEPK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.8026 2 605.801143 1209.58773 78184.67 0.53338 0.00032312 0.039001 2.3627E-05 0.57238 0.00034675 605.801240129815 609.80814513444 38.57 0.3745 38.57 38.421 38.796 0 122 32 5 0 0 0 0.0002022 2 20264 79.201 62.868 1 0.92234 0.94212 0 31486000 13778000 17708000 3066 1259 1122 1155 4825;4826 4825 ASDQLQVGVEFEASTR 16 0 1 Unmodified _ASDQLQVGVEFEASTR_ 0 0 0 O96008;K7EKG4 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.9302 2 868.926123 1735.83769 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.428 1 87.428 86.928 87.928 0 0 0 0 0.0099425 1 52760 45.79 33.858 1 3067 1433 1123 1156 4827 4827 ASDQLQVGVEFEASTR 16 0 1 Unmodified _ASDQLQVGVEFEASTR_ 0 0 0 O96008;K7EKG4 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.8904 2 868.926123 1735.83769 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.459 1 87.459 86.959 87.959 7.6294E-06 0 0 0 0.0088297 1 52778 47.189 30.656 1 3068 1433 1123 1156 4828 4828 ASDQLQVGVEFEASTR 16 0 1 Unmodified _ASDQLQVGVEFEASTR_ 0 0 0 O96008;K7EKG4 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 873.9314 2 868.926123 1735.83769 NaN NaN NaN 0.42295 0.00036751 NaN NaN NaN NaN 98.83 0.65836 98.83 98.545 99.203 0 0 0 0 0.010211 1 54839 47.915 37.683 1 NaN NaN 0 3499700 0 3499700 3069 1433 1123 1156 4829 4829 ASEIMVDDEELAQHPATTEDIR 22 0 1 Oxidation (M) _ASEIM(ox)VDDEELAQHPATTEDIR_ ASEIM(1)VDDEELAQHPATTEDIR ASEIM(131.59)VDDEELAQHPATTEDIR 0 1 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.0549 3 829.383231 2485.12786 65892.73 0.54099 0.00044869 0.29317 0.00024315 0.83416 0.00069184 829.717662247791 833.053978508048 73.472 0.66341 73.472 73.119 73.783 0 424 61 11 0 0 0 1.0892E-29 2 43034 131.59 131.59 1 1.1669 1.3211 0 105160000 51167000 53994000 3070 1898 1124 1157 4830;4831 4831 1739 ASEIMVDDEELAQHPATTEDIR 22 0 1 Oxidation (M) _ASEIM(ox)VDDEELAQHPATTEDIR_ ASEIM(1)VDDEELAQHPATTEDIR ASEIM(117.31)VDDEELAQHPATTEDIR 0 1 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.0546 3 829.383231 2485.12786 65620.13 0.79831 0.0006621 -0.062364 -5.1723E-05 0.73594 0.00061038 829.717582534991 833.053718655637 72.432 0.55732 72.432 72.146 72.704 0 407 50 10 0 0 0 2.0093E-22 2 43359 117.31 117.31 1 1.2159 1.3834 0 115400000 54943000 60457000 3071 1898 1124 1157 4832;4833 4832 1739 ASEIMVDDEELAQHPATTEDIR 22 0 1 Oxidation (M) _ASEIM(ox)VDDEELAQHPATTEDIR_ ASEIM(1)VDDEELAQHPATTEDIR ASEIM(52.54)VDDEELAQHPATTEDIR 0 1 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.3829 3 829.383231 2485.12786 66133.04 0.80155 0.00066479 -0.10037 -8.3245E-05 0.70118 0.00058155 829.717568196012 833.053679921551 84.744 0.64769 84.744 84.388 85.035 0 359 46 11 0 0 0 1.5917E-07 1 45352 52.541 52.541 1 0.91125 0.7921 0 24462000 12443000 12019000 3072 1898 1124 1157 4834 4834 1739 ASEIMVDDEELAQHPATTEDIR 22 0 1 Unmodified _ASEIMVDDEELAQHPATTEDIR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 824.3864 3 824.051592 2469.13295 66753.3 0.7874 0.00064886 0.096849 7.9809E-05 0.88425 0.00072867 824.385973501981 827.722279444813 92.101 0.46819 92.101 91.863 92.331 0 192 26 10 0 0 0 0.00045263 2 51206 33.665 33.024 1 1.2402 1.0447 0 9752100 4599500 5152600 3073 1898 1124 1158 4835;4836 4836 ASEIMVDDEELAQHPATTEDIR 22 0 1 Unmodified _ASEIMVDDEELAQHPATTEDIR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.7231 3 824.051592 2469.13295 67398.33 0.60843 0.00050138 0.1746 0.00014388 0.78303 0.00064525 824.385986399399 828.056168869921 91.893 0.49277 91.893 91.637 92.13 0 203 28 10 0 0 0 1.5047E-05 2 50232 41.615 41.615 1 1.3533 1.121 0 7903200 3362300 4541000 3074 1898 1124 1158 4837;4838 4838 ASELHLLETPLVVK 14 1 0 Unmodified _ASELHLLETPLVVK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.6431 3 516.971374 1547.89229 84267.56 0.53666 0.00027744 0.0072392 3.7425E-06 0.54389 0.00028118 516.971410468235 519.642816497661 103.1 1.0321 103.1 102.48 103.51 -7.6294E-06 403 88 6 0 0 0 6.1821E-05 2 63309 56.46 45.515 1 1.419 1.5793 0 60940000 26871000 34069000 3075 1945 1125 1159 4839;4840 4839 ASELHLLETPLVVK 14 1 0 Unmodified _ASELHLLETPLVVK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.9603 2 774.953423 1547.89229 71840.01 0.85529 0.00066281 -0.18654 -0.00014456 0.66876 0.00051825 775.955848235329 778.960574636099 103.02 0.72791 103.02 102.62 103.35 7.6294E-06 191 62 7 0 0 0 0.0031935 2 63437 47.559 47.559 1 1.2091 1.2642 0 11941000 5811600 6129200 3076 1945 1125 1159 4841;4842 4842 ASELHLLETPLVVK 14 1 0 Unmodified _ASELHLLETPLVVK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.6428 3 516.971374 1547.89229 84488.92 0.40333 0.00020851 -0.1222 -6.3176E-05 0.28113 0.00014533 517.305565053524 519.642725138261 101.72 0.94362 101.72 101.16 102.11 0 349 73 7 0 0 0 0.0026753 2 63759 25.066 18.878 1 1.3658 1.5 0 41705000 18360000 23345000 3077 1945 1125 1159 4843;4844 4843 ASELHLLETPLVVK 14 1 0 Unmodified _ASELHLLETPLVVK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.9543 2 774.953423 1547.89229 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.57 1 101.57 101.07 102.07 0 0 0 0 0.030827 1 63962 50.194 35.504 1 3078 1945 1125 1159 4845 4845 ASELHLLETPLVVK 14 1 0 Unmodified _ASELHLLETPLVVK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.3057 3 516.971374 1547.89229 83538.73 0.86621 0.00044781 -0.098611 -5.0979E-05 0.7676 0.00039683 516.971335004604 519.642717876486 113.92 0.71021 113.92 113.64 114.35 7.6294E-06 188 31 10 0 0 0 0.0003439 1 66369 40.983 36.741 1 2.5424 2.0948 0 40881000 11783000 29098000 3079 1945 1125 1159 4846 4846 ASELHLLETPLVVK 14 1 0 Unmodified _ASELHLLETPLVVK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.9611 2 774.953423 1547.89229 69977.94 1.2229 0.00094772 -0.56184 -0.0004354 0.6611 0.00051232 775.45373478521 778.960442027463 113.94 0.54756 113.94 113.68 114.23 -7.6294E-06 138 24 9 0 0 0 0.00014827 1 66380 77.062 77.062 1 1.4908 1.1583 0 15062000 5997800 9064400 3080 1945 1125 1159 4847 4847 ASELHLLETPLVVK 14 1 0 Unmodified _ASELHLLETPLVVK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.9722 3 516.971374 1547.89229 84120.45 0.38944 0.00020133 -0.20028 -0.00010354 0.18916 9.779E-05 516.971286602755 519.642657712886 113.65 0.64391 113.65 113.33 113.98 0 192 30 9 0 0 0 0.0050034 1 65226 26.781 15.837 1 2.606 2.1308 0 26571000 7471500 19099000 3081 1945 1125 1159 4848 4848 ASELNPESIYSVFK 14 1 0 Unmodified _ASELNPESIYSVFK_ 0 0 0 Q6PGP7;D6RCE2 Q6PGP7 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.4097 2 792.401221 1582.78789 75606.3 0.86894 0.00068855 -0.058525 -4.6376E-05 0.81042 0.00064217 792.402239047727 796.408432728793 114.77 0.2626 114.77 114.64 114.91 0 41 15 4 0 0 0 0.0088712 1 74743 37.968 25.392 1 1.0971 1.0881 0 6012500 2753500 3259000 3082 1855 1126 1160 4849 4849 ASEMAGPPQMPNDFLSFQDIATEAAHPIR 29 0 1 2 Oxidation (M) _ASEM(ox)AGPPQM(ox)PNDFLSFQDIATEAAHPIR_ ASEM(1)AGPPQM(1)PNDFLSFQDIATEAAHPIR ASEM(68.93)AGPPQM(68.93)PNDFLSFQDIATEAAHPIR 0 2 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1062.4985 3 1058.49374 3172.45938 59802.34 0.71887 0.00076092 -0.7759 -0.00082129 -0.057035 -6.0372E-05 1058.82767381375 1062.49708623371 114.82 0.46712 114.82 114.63 115.09 -7.6294E-06 179 29 11 0 0 0 3.0902E-16 1 74814 68.934 68.934 1 2.0556 2.252 0 31412000 10773000 20639000 3083 1854 1127 1161 4850 4850 1705;1706 ASESSKPWPDATYGTGSASR 20 1 1 Unmodified _ASESSKPWPDATYGTGSASR_ 0 0 1 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 691.6587 3 685.65198 2053.93411 73149.52 0.31557 0.00021637 0.17009 0.00011662 0.48565 0.00033299 685.98644624466 691.659700952457 51.759 0.52066 51.759 51.461 51.982 0 191 38 7 0 0 0 0.060136 1 24855 13.608 13.608 1 1.1632 1.0015 0 2424300 1155600 1268800 3084 2128 1128 1162 4851 4851 ASEVEEILDGNDEK 14 1 0 Unmodified _ASEVEEILDGNDEK_ 0 0 0 Q9H836;G5E975;Q12824;B5MCL5;Q86WI8;A0A0U1RQQ2;Q86WI7;A0A0U1RRB8;C9JTA6;A0A0G2JSE9;B4E117;B4DRT1 Q9H836 Q9H836 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.3582 2 774.357207 1546.69986 69580.29 0.84863 0.00065714 0.053968 4.1791E-05 0.9026 0.00069893 774.356866042949 778.364529641731 78.887 0.53914 78.887 78.631 79.17 0 201 48 5 0 0 0 3.5111E-57 2 46717 191.52 179.56 1 0.7854 0.84932 0 35654000 19162000 16491000 3085 1276 1129 1163 4852;4853 4853 ASEVEEILDGNDEK 14 1 0 Unmodified _ASEVEEILDGNDEK_ 0 0 0 Q9H836;G5E975;Q12824;B5MCL5;Q86WI8;A0A0U1RQQ2;Q86WI7;A0A0U1RRB8;C9JTA6;A0A0G2JSE9;B4E117;B4DRT1 Q9H836 Q9H836 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.3654 2 774.357207 1546.69986 70558.31 0.70854 0.00054867 0.1945 0.00015061 0.90304 0.00069928 774.357281524088 778.364499675513 77.974 0.55414 77.974 77.674 78.228 0 196 47 5 0 0 0 3.0194E-14 2 47166 157.68 157.68 1 0.78919 0.8234 0 34158000 17027000 17132000 3086 1276 1129 1163 4854;4855 4855 ASEVEEILDGNDEK 14 1 0 Unmodified _ASEVEEILDGNDEK_ 0 0 0 Q9H836;G5E975;Q12824;B5MCL5;Q86WI8;A0A0U1RQQ2;Q86WI7;A0A0U1RRB8;C9JTA6;A0A0G2JSE9;B4E117;B4DRT1 Q9H836 Q9H836 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.3571 2 774.357207 1546.69986 69300.45 0.78118 0.00060491 0.15589 0.00012072 0.93707 0.00072563 774.357105028659 778.365051179991 90.552 0.51015 90.552 90.282 90.793 0 163 30 7 0 0 0 0.00095005 2 50199 57.175 57.175 1 1.5587 1.2295 0 5455600 2032300 3423300 3087 1276 1129 1163 4856;4857 4857 ASEVEEILDGNDEK 14 1 0 Unmodified _ASEVEEILDGNDEK_ 0 0 0 Q9H836;G5E975;Q12824;B5MCL5;Q86WI8;A0A0U1RQQ2;Q86WI7;A0A0U1RRB8;C9JTA6;A0A0G2JSE9;B4E117;B4DRT1 Q9H836 Q9H836 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 774.3572 2 774.357207 1546.69986 69156.73 0.56956 0.00044104 -0.39848 -0.00030856 0.17108 0.00013248 774.356963056292 778.364272564073 90.581 0.50282 90.581 90.343 90.846 0 159 27 8 0 0 0 0.049213 1 49373 25.701 25.701 1 1.6588 1.3536 0 6239100 2240700 3998300 3088 1276 1129 1163 4858 4858 ASEVFLQR 8 0 1 Unmodified _ASEVFLQR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.2623 2 475.258717 948.50288 87292.64 0.34579 0.00016434 0.17443 8.29E-05 0.52023 0.00024724 475.258896320311 480.26283004198 46.67 0.50726 46.67 46.248 46.756 -3.8147E-06 201 42 9 0 0 0 0.0078606 3 25088 81.119 49.277 1 1.1633 1.3748 0 255000000 127740000 127260000 3089 2023;1687 1130 1164 4859;4860;4861 4859 ASEVFLQR 8 0 1 Unmodified _ASEVFLQR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.5898 2 475.258717 948.50288 87843.34 0.19794 9.4072E-05 0.55256 0.00026261 0.7505 0.00035668 475.258947409564 480.263141869478 46.785 0.59757 46.785 46.673 47.271 0 149 57 4 0 0 0 0.039541 1 25387 113.89 66.895 1 0.65096 0.7695 0 256070000 121550000 134520000 3090 2023;1687 1130 1164 4862 4862 ASEVFLQR 8 0 1 Unmodified _ASEVFLQR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.2633 2 475.258717 948.50288 87729.67 0.10797 5.1313E-05 0.18564 8.8228E-05 0.29361 0.00013954 475.25872221601 480.262899508278 45.773 0.95546 45.773 45.402 46.357 0 405 79 9 0 0 0 1.733E-05 2 25131 143 83.376 1 0.88328 1.0222 0 273600000 133690000 139910000 3091 2023;1687 1130 1164 4863;4864 4864 ASEVFLQR 8 0 1 Unmodified _ASEVFLQR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.2585 2 475.258717 948.50288 86597.2 0.1842 8.7543E-05 -0.10556 -5.0169E-05 0.07864 3.7374E-05 475.258720244916 480.262623157932 53.397 0.97097 53.397 53.021 53.992 0 419 72 10 0 0 0 0.0011528 2 26441 111.65 65.633 1 1.3704 1.172 0 39379000 16835000 22544000 3092 2023;1687 1130 1164 4865;4866 4866 ASEVFLQR 8 0 1 Unmodified _ASEVFLQR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.2587 2 475.258717 948.50288 86269.04 0.18102 8.6032E-05 0.025063 1.1911E-05 0.20608 9.7944E-05 475.258724697298 480.262731274276 53.706 1.078 53.706 53.235 54.313 0 395 77 9 0 0 0 0.0019563 2 25971 104.21 67.508 1 1.3582 1.1848 0 31222000 13827000 17395000 3093 2023;1687 1130 1164 4867;4868 4868 ASEVMGPVEAAPEYR 15 0 1 Oxidation (M) _ASEVM(ox)GPVEAAPEYR_ ASEVM(1)GPVEAAPEYR ASEVM(85.29)GPVEAAPEYR 0 1 0 B4DWW8;E7EVX8;Q8WWY3;E7EU94;E7ESX0;E7EN72 B4DWW8 B4DWW8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.3852 2 811.379962 1620.74537 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.216 1 54.216 53.716 54.716 0 0 0 0 9.7344E-05 1 30459 85.288 61.438 1 3094 1046 1131 1165 4869 4869 820 ASEVMGPVEAAPEYR 15 0 1 Oxidation (M) _ASEVM(ox)GPVEAAPEYR_ ASEVM(1)GPVEAAPEYR ASEVM(84.48)GPVEAAPEYR 0 1 0 B4DWW8;E7EVX8;Q8WWY3;E7EU94;E7ESX0;E7EN72 B4DWW8 B4DWW8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.3808 2 811.379962 1620.74537 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.442 1 53.442 52.942 53.942 -3.8147E-06 0 0 0 0.00010522 1 30566 84.479 60.628 1 3095 1046 1131 1165 4870 4870 820 ASEVMGPVEAAPEYR 15 0 1 Oxidation (M) _ASEVM(ox)GPVEAAPEYR_ ASEVM(1)GPVEAAPEYR ASEVM(85.29)GPVEAAPEYR 0 1 0 B4DWW8;E7EVX8;Q8WWY3;E7EU94;E7ESX0;E7EN72 B4DWW8 B4DWW8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.3834 2 811.379962 1620.74537 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.48 1 53.48 52.98 53.98 0 0 0 0 9.7344E-05 1 30579 85.288 52.064 1 3096 1046 1131 1165 4871 4871 820 ASEVQEFTAEFLEK 14 1 0 Unmodified _ASEVQEFTAEFLEK_ 0 0 0 B2RDX0;A8K7Z9;A0A024R6R1;Q8NEM2 B2RDX0 B2RDX0 SHCBP1 SHC SH2 domain-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 814.8973 2 814.396135 1626.77772 68967.74 0.80305 0.000654 -0.21773 -0.00017732 0.58532 0.00047669 814.396063921921 818.402942317318 125.31 0.56465 125.31 125.02 125.58 -7.6294E-06 61 22 5 0 0 0 0.0005188 2 75269 60.255 47.679 1 0.86543 0.68449 0 3041100 1336200 1704900 3097 207 1132 1166 4872;4873 4873 ASEVQEFTAEFLEK 14 1 0 Unmodified _ASEVQEFTAEFLEK_ 0 0 0 B2RDX0;A8K7Z9;A0A024R6R1;Q8NEM2 B2RDX0 B2RDX0 SHCBP1 SHC SH2 domain-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.4038 2 814.396135 1626.77772 68073.87 0.84415 0.00068747 -0.13716 -0.00011171 0.70698 0.00057576 814.396095890145 818.4029215853 125.16 0.50551 125.16 124.89 125.4 0 67 21 5 0 0 0 0.00019192 2 74211 70.488 61.3 1 0.93418 0.72966 0 3428000 1417000 2011100 3098 207 1132 1166 4874;4875 4874 ASFASASAEVGKK 13 2 0 Unmodified _ASFASASAEVGKK_ 0 0 1 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8298 2 626.830234 1251.64592 79449.69 0.91631 0.00057437 0.1281 8.03E-05 1.0444 0.00065467 626.830163223124 634.844476417054 25.957 0.1783 25.957 25.824 26.002 0 31 11 4 0 0 0 0.0041606 1 11442 53.569 34.823 1 0.82814 0.94613 0 14730000 8014300 6716100 3099 1380 1133 1167 4876 4876 ASFASASAEVGKK 13 2 0 Unmodified _ASFASASAEVGKK_ 0 0 1 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.8447 2 626.830234 1251.64592 77399.46 0.22371 0.00014023 0.40437 0.00025347 0.62808 0.0003937 626.83006272545 634.844453806478 30.125 0.35188 30.125 29.914 30.266 0 83 20 6 0 0 0 0.022909 1 11939 38.021 21.389 1 0.87878 0.76681 0 2362600 1172900 1189700 3100 1380 1133 1167 4877 4877 ASFENNCEIGCFAK 14 1 0 Unmodified _ASFENNCEIGCFAK_ 0 0 0 P56537;B7ZBH1;F8WD20;B4DJH0;A0A0B4J1Y7;F8WDS6 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.8505 2 823.850515 1645.68648 66025.11 0.66047 0.00054413 -0.15704 -0.00012937 0.50343 0.00041475 823.85054999177 827.85767240432 71.347 0.71152 71.347 70.981 71.692 0 409 60 9 0 0 0 1.9024E-14 2 41438 131.82 129.88 1 0.84889 0.96282 0 95194000 50861000 44333000 3101 1619 1134 1168 4878;4879 4878 ASFENNCEIGCFAK 14 1 0 Unmodified _ASFENNCEIGCFAK_ 0 0 0 P56537;B7ZBH1;F8WD20;B4DJH0;A0A0B4J1Y7;F8WDS6 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.8584 2 823.850515 1645.68648 66634.09 0.66695 0.00054947 -0.37812 -0.00031152 0.28883 0.00023795 823.850514772465 827.857559859314 70.126 0.7682 70.126 69.785 70.553 0 421 62 10 0 0 0 4.5577E-15 2 41685 136.48 133.74 1 0.81039 0.9056 0 94696000 51859000 42837000 3102 1619 1134 1168 4880;4881 4881 ASFENNCEIGCFAK 14 1 0 Unmodified _ASFENNCEIGCFAK_ 0 0 0 P56537;B7ZBH1;F8WD20;B4DJH0;A0A0B4J1Y7;F8WDS6 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 828.3594 2 823.850515 1645.68648 65253.11 0.76152 0.00062738 -0.51281 -0.00042248 0.24871 0.0002049 823.850497678432 827.857437338563 81.73 0.9046 81.73 81.393 82.298 0 398 53 10 0 0 0 0.00017671 1 44190 72.652 68.635 1 1.138 0.93157 0 35286000 17111000 18176000 3103 1619 1134 1168 4882 4882 ASFENNCEIGCFAK 14 1 0 Unmodified _ASFENNCEIGCFAK_ 0 0 0 P56537;B7ZBH1;F8WD20;B4DJH0;A0A0B4J1Y7;F8WDS6 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 823.8519 2 823.850515 1645.68648 65887.93 0.6564 0.00054078 -0.55996 -0.00046132 0.096447 7.9458E-05 823.850454948492 827.857576507738 82.022 1.1769 82.022 81.346 82.523 0 411 65 11 0 0 0 3.0789E-05 2 43555 96.015 93.282 1 1.1018 0.911 0 32442000 15570000 16872000 3104 1619 1134 1168 4883;4884 4884 ASFPVQILPNLYLGSAR 17 0 1 Unmodified _ASFPVQILPNLYLGSAR_ 0 0 0 Q6P9C2;B2RAL9;Q99956;Q8N4A4 Q6P9C2 Q6P9C2 DUSP9 Dual specificity protein phosphatase;Dual specificity protein phosphatase 9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 923.5148 2 923.514711 1845.01487 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.85 1 128.85 128.35 129.35 0 0 0 0 0.0033047 1 84042 53.448 39.542 1 3105 872 1135 1169 4885 4885 ASFPVQILPNLYLGSAR 17 0 1 Unmodified _ASFPVQILPNLYLGSAR_ 0 0 0 Q6P9C2;B2RAL9;Q99956;Q8N4A4 Q6P9C2 Q6P9C2 DUSP9 Dual specificity protein phosphatase;Dual specificity protein phosphatase 9 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.5198 2 923.514711 1845.01487 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.4 1 128.4 127.9 128.9 0 0 0 0 1.0326E-07 1 85828 96.866 77.125 1 3106 872 1135 1169 4886 4886 ASFVTEVLAHSGR 13 0 1 Acetyl (Protein N-term) _(ac)ASFVTEVLAHSGR_ 1 0 0 F5H3C1;B4DUQ3;B2R7C2;O43264 F5H3C1 F5H3C1 ZW10 Centromere/kinetochore protein zw10 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.3723 2 708.367515 1414.72048 NaN NaN NaN 0.45904 0.00032517 NaN NaN NaN NaN 123.45 0.39539 123.45 123.25 123.65 0 0 0 0 0.0031902 1 80076 74.944 67.299 1 NaN NaN 0 2682700 0 2682700 3107 849 1136 1170 4887 4887 ASFVTEVLAHSGR 13 0 1 Acetyl (Protein N-term) _(ac)ASFVTEVLAHSGR_ 1 0 0 F5H3C1;B4DUQ3;B2R7C2;O43264 F5H3C1 F5H3C1 ZW10 Centromere/kinetochore protein zw10 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.3668 2 708.367515 1414.72048 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.55 1 123.55 123.05 124.05 7.6294E-06 0 0 0 0.0018944 1 80129 56.548 35.084 1 3108 849 1136 1170 4888 4888 ASFVTEVLAHSGR 13 0 1 Acetyl (Protein N-term) _(ac)ASFVTEVLAHSGR_ 1 0 0 F5H3C1;B4DUQ3;B2R7C2;O43264 F5H3C1 F5H3C1 ZW10 Centromere/kinetochore protein zw10 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.3719 2 708.367515 1414.72048 73797.55 1.1216 0.00079453 -1.0622 -0.00075245 0.059409 4.2084E-05 708.366968036446 713.371489209472 122.94 0.43327 122.94 122.79 123.23 7.6294E-06 104 31 5 0 0 0 0.00025161 2 81580 84.507 73.145 1 1.3229 1.3382 0 9583100 4050500 5532600 3109 849 1136 1170 4889;4890 4889 ASGAGSEFQDQTR 13 0 1 Unmodified _ASGAGSEFQDQTR_ 0 0 0 Q5C9Z4 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.8056 2 677.305112 1352.59567 79544.59 0.72721 0.00049255 -0.84807 -0.0005744 -0.12086 -8.1856E-05 677.806634407071 682.309178060527 23.107 0.30303 23.107 22.908 23.211 0 52 15 6 0 0 0 0.00036656 3 9017 62.408 57.467 1 0.74461 0.78185 0 4275600 2299700 1975900 3110 1805 1137 1171 4891;4892;4893 4893 ASGAGSEFQDQTR 13 0 1 Unmodified _ASGAGSEFQDQTR_ 0 0 0 Q5C9Z4 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.3089 2 677.305112 1352.59567 79307.97 0.082406 5.5814E-05 0.5361 0.0003631 0.6185 0.00041892 677.305317886967 682.309498821598 22.818 0.2645 22.818 22.701 22.965 0 35 11 5 0 0 0 0.0001783 1 8780 71.555 67.538 1 0.73827 0.7828 0 3804200 1648800 2155400 3111 1805 1137 1171 4894 4894 ASGFVFTR 8 0 1 Unmodified _ASGFVFTR_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;H7C5K0 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.7347 2 442.734877 883.455202 91092.49 0.072983 3.2312E-05 -0.074995 -3.3203E-05 -0.0020121 -8.9082E-07 442.73469257843 447.739199137461 59.694 0.4618 59.694 59.476 59.938 0 89 37 4 0 0 0 0.0015581 1 33973 107.9 66.393 1 0.39722 0.39844 0 16146000 11209000 4937200 3112 512 1138 1172 4895 4895 ASGFVFTR 8 0 1 Unmodified _ASGFVFTR_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;H7C5K0 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.7357 2 442.734877 883.455202 NaN NaN NaN 0.23022 0.00010193 NaN NaN NaN NaN 58.484 0.36151 58.484 58.3 58.661 3.8147E-06 0 0 0 0.0030453 1 33992 103.83 72.544 1 NaN NaN 0 19273000 19273000 0 3113 512 1138 1172 4896 4896 ASGGLPQFGDEYDFYR 16 0 1 Unmodified _ASGGLPQFGDEYDFYR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 911.9103 2 911.407566 1820.80058 64417.43 0.48997 0.00044657 0.014968 1.3642E-05 0.50494 0.00046021 911.909188915099 916.913571343352 105.39 0.60238 105.39 105.06 105.66 0 226 45 7 0 0 0 0.00015361 1 65237 68.44 63.639 1 0.83613 0.84312 0 17599000 9301900 8297300 3114 1676 1139 1173 4897 4897 ASGGLPQFGDEYDFYR 16 0 1 Unmodified _ASGGLPQFGDEYDFYR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 911.4079 2 911.407566 1820.80058 65557.35 0.75811 0.00069095 -0.35728 -0.00032563 0.40083 0.00036532 911.407778262329 916.41220617188 104.76 0.58522 104.76 104.47 105.05 -7.6294E-06 265 46 9 0 0 0 1.1923E-05 1 66385 86.772 86.772 1 0.82589 0.83958 0 20432000 11080000 9352500 3115 1676 1139 1173 4898 4898 ASGGLPQFGDEYDFYR 16 0 1 Unmodified _ASGGLPQFGDEYDFYR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 916.412 2 911.407566 1820.80058 NaN NaN NaN 0.66671 0.00060764 NaN NaN NaN NaN 116.59 0.49314 116.59 116.4 116.9 0 0 0 0 0.044803 1 68481 35.774 27.045 1 NaN NaN 0 6640000 0 6640000 3116 1676 1139 1173 4899 4899 ASGGLPQFGDEYDFYR 16 0 1 Unmodified _ASGGLPQFGDEYDFYR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 916.4126 2 911.407566 1820.80058 NaN NaN NaN 0.48347 0.00044064 NaN NaN NaN NaN 116.52 0.48557 116.52 116.3 116.79 7.6294E-06 0 0 0 0.0012763 1 67502 64.224 50.319 1 NaN NaN 0 9272200 0 9272200 3117 1676 1139 1173 4900 4900 ASGGSLQGHDAVLR 14 0 1 Unmodified _ASGGSLQGHDAVLR_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.5726 3 456.572385 1366.69533 89341.34 0.65907 0.00030091 0.030182 1.378E-05 0.68925 0.00031469 456.572360623753 460.242188775603 28.609 0.31028 28.609 28.498 28.809 0 80 17 9 0 0 0 8.0498E-10 1 13539 115.78 115.78 1 0.20583 0.22893 0 76188000 61886000 14302000 3118 1927 1140 1174 4901 4901 ASGGSLQGHDAVLR 14 0 1 Unmodified _ASGGSLQGHDAVLR_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.5721 3 456.572385 1366.69533 88748.16 0.04131 1.8861E-05 -0.7125 -0.00032531 -0.67119 -0.00030644 456.572206678591 459.907704773557 27.787 0.39709 27.787 27.628 28.025 -1.9073E-06 91 22 9 0 0 0 1.9383E-10 2 13029 123.02 123.02 1 0.57849 0.66112 0 89543000 52965000 36578000 3119 1927 1140 1174 4902;4903 4903 ASGGSLQGHDAVLR 14 0 1 Unmodified _ASGGSLQGHDAVLR_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.355 2 684.354939 1366.69533 NaN NaN NaN 0.08735 5.9778E-05 NaN NaN NaN NaN 27.773 0.2985 27.773 27.649 27.947 0 0 0 0 1.4135E-97 1 13032 215.02 180.82 1 NaN NaN 0 26411000 26411000 0 3120 1927 1140 1174 4904 4904 ASGGSLQGHDAVLR 14 0 1 Unmodified _ASGGSLQGHDAVLR_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 459.9084 3 456.572385 1366.69533 89656.68 0.0064507 2.9452E-06 -0.26357 -0.00012034 -0.25712 -0.00011739 456.572314615031 459.908194384608 32.498 0.57561 32.498 32.293 32.869 0 118 27 10 0 0 0 1.1995E-05 2 13990 94.728 94.728 1 0.90623 0.76033 0 25871000 14429000 11442000 3121 1927 1140 1174 4905;4906 4906 ASGGSLQGHDAVLR 14 0 1 Unmodified _ASGGSLQGHDAVLR_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.358 2 684.354939 1366.69533 72380.17 0.32749 0.00022412 -0.11544 -7.8999E-05 0.21205 0.00014512 684.355053112205 689.358839957943 32.5 0.43654 32.5 32.313 32.749 0 91 20 9 0 0 0 3.022E-06 2 13980 103.76 103.76 1 0.9546 0.77894 0 14679000 7502900 7175800 3122 1927 1140 1174 4907;4908 4907 ASGGSLQGHDAVLR 14 0 1 Unmodified _ASGGSLQGHDAVLR_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3592 2 684.354939 1366.69533 72180.7 0.54108 0.00037029 -0.023637 -1.6176E-05 0.51744 0.00035411 684.354877813531 689.359103467373 32.538 0.31617 32.538 32.398 32.715 0 94 15 9 0 0 0 2.2728E-09 2 13546 117.03 117.03 1 0.98734 0.8118 0 13965000 7054000 6910900 3123 1927 1140 1174 4909;4910 4909 ASGGSLQGHDAVLR 14 0 1 Unmodified _ASGGSLQGHDAVLR_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 456.5725 3 456.572385 1366.69533 88447.19 0.017728 8.0941E-06 0.13534 6.1793E-05 0.15307 6.9887E-05 456.572365770348 459.908516878022 32.532 0.67466 32.532 32.146 32.821 0 128 33 9 0 0 0 0.01286 1 13569 27.798 27.798 1 0.98648 0.84465 0 20769000 10430000 10339000 3124 1927 1140 1174 4911 4911 ASGLVPNVVVLVATVR 16 0 1 Unmodified _ASGLVPNVVVLVATVR_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.9909 2 797.487965 1592.96138 75721.57 1.3411 0.0010695 -0.14529 -0.00011586 1.1958 0.00095366 797.488451265864 802.993347678702 129.97 0.21159 129.97 129.86 130.07 0 35 10 6 0 0 0 7.0498E-05 2 84739 81.92 77.611 1 1.8175 1.9121 0 4185800 1606700 2579000 3125 418 1141 1175 4912;4913 4913 ASGLVPNVVVLVATVR 16 0 1 Unmodified _ASGLVPNVVVLVATVR_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.4935 2 797.487965 1592.96138 70811.46 0.87636 0.00069889 0.37237 0.00029696 1.2487 0.00099585 797.48832714215 802.993914622269 129.52 0.55687 129.52 129.34 129.89 0 68 33 4 0 0 0 9.9802E-05 2 86483 79.492 60.867 1 2.1338 2.1503 0 6492400 2518000 3974300 3126 418 1141 1175 4914;4915 4914 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.9222 2 844.915558 1687.81656 66201.35 0.70338 0.00059429 0.019136 1.6168E-05 0.72251 0.00061046 844.915661716546 848.922677700827 38.477 0.63829 38.477 38.27 38.908 0 371 52 12 0 0 0 4.8748E-68 3 19656 192.4 183.99 1 0.76117 0.9113 0 907070000 500500000 406570000 3127 1653 1142 1176 4916;4917;4918 4916 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.6188 3 563.612797 1687.81656 79801.28 0.65538 0.00036938 -0.29122 -0.00016413 0.36416 0.00020524 563.613023798806 566.284064455154 38.477 0.94529 38.477 38.247 39.193 0 549 77 12 0 0 0 3.0306E-06 2 19669 68.41 68.41 1 0.76359 0.92058 0 1421000000 802790000 618170000 3128 1653 1142 1176 4919;4920 4920 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.9221 2 844.915558 1687.81656 66006.58 0.49873 0.00042139 0.23884 0.0002018 0.73757 0.00062319 844.915864755547 848.922831753745 37.327 0.61393 37.327 37.057 37.671 0 269 50 11 0 0 0 5.7854E-81 2 19225 222.55 209.54 1 0.80767 0.95324 0 936460000 521680000 414770000 3129 1653 1142 1176 4921;4922 4921 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.2844 3 563.612797 1687.81656 80056.2 0.45635 0.0002572 -0.11564 -6.5175E-05 0.34071 0.00019203 563.613082957344 566.284077996785 37.335 0.93891 37.335 37.033 37.971 0 618 75 13 0 0 0 2.0055E-05 2 19238 76.85 76.85 1 0.78723 0.93067 0 1543400000 872720000 670680000 3130 1653 1142 1176 4923;4924 4924 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.9228 2 844.915558 1687.81656 66209 0.60502 0.00051119 -0.12371 -0.00010453 0.48131 0.00040667 844.915507358907 848.922534786265 37.421 0.33733 37.421 37.381 37.718 0 155 27 8 0 0 0 1.1246E-08 1 19573 106.29 106.29 1 0.66385 0.78125 0 397620000 237140000 160480000 3131 1653 1142 1176 4925 4925 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.9164 2 844.915558 1687.81656 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.912 1 37.912 37.412 38.412 0 0 0 0 0.039641 1 19790 40.113 25.694 1 3132 1653 1142 1176 4926 4926 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 845.4184 2 844.915558 1687.81656 65665.79 0.6617 0.00055908 -0.22229 -0.00018781 0.43942 0.00037127 844.915516588841 848.92240893866 44.553 0.7505 44.553 44.305 45.055 0 473 56 12 0 0 0 0.016399 1 21110 41.621 41.621 1 0.92198 0.79692 0 110670000 55228000 55445000 3133 1653 1142 1176 4927 4927 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.9473 3 563.612797 1687.81656 79429.74 0.62003 0.00034946 -0.25497 -0.00014371 0.36505 0.00020575 563.613210610902 566.283931759567 44.552 1.1037 44.552 44.204 45.307 0 551 79 12 0 0 0 0.056919 1 21115 13.959 11.889 1 0.93391 0.81883 0 205940000 106470000 99469000 3134 1653 1142 1176 4928 4928 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.923 2 844.915558 1687.81656 66221.31 0.76991 0.00065051 -0.44542 -0.00037634 0.3245 0.00027417 844.915277725117 848.922207806617 44.6 1.1804 44.6 44.259 45.44 0 548 81 12 0 0 0 0.00037905 1 20527 51.546 48.323 1 0.90473 0.76122 0 51673000 28266000 23407000 3135 1653 1142 1176 4929 4929 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.2842 3 563.612797 1687.81656 79057.66 0.74823 0.00042171 -0.67963 -0.00038305 0.068598 3.8663E-05 563.612640725797 566.283720354073 44.594 1.3802 44.594 44.226 45.607 0 670 95 12 0 0 0 7.189E-05 2 20610 58.246 47.612 1 0.94353 0.80515 0 98302000 49452000 48850000 3136 1653 1142 1176 4930;4931 4931 ASGNYATVISHNPETKK 17 2 0 Unmodified _ASGNYATVISHNPETKK_ 0 0 1 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.3113 3 606.311118 1815.91153 76747.78 0.25973 0.00015748 0.064107 3.8869E-05 0.32384 0.00019635 606.310639329083 611.654067298236 32.203 0.6635 32.203 31.85 32.513 0 159 33 8 0 0 0 9.8695E-06 2 13782 79.837 73.401 1 1.0657 0.91021 0 14281000 7351300 6929600 3137 1653 1143 1177 4932;4933 4933 ASGNYATVISHNPETKK 17 2 0 Unmodified _ASGNYATVISHNPETKK_ 0 0 1 P62917;B4DVG7;E9PKZ0;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.6543 3 606.311118 1815.91153 76759.71 0.48283 0.00029274 0.090473 5.4855E-05 0.5733 0.0003476 606.645538509716 611.654089732321 32.24 0.59325 32.24 32.003 32.596 0 153 30 9 0 0 0 3.1682E-07 2 13306 88.551 88.551 1 1.0142 0.85615 0 9407100 4330200 5077000 3138 1653 1143 1177 4934;4935 4934 ASGPGLNTTGVPASLPVEFTIDAK 24 1 0 Unmodified _ASGPGLNTTGVPASLPVEFTIDAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1172.1154 2 1171.61555 2341.21654 57410.26 0.27642 0.00032386 0.19188 0.00022482 0.46831 0.00054868 1172.11619612933 1175.62296605675 121.22 0.36919 121.22 121.05 121.42 0 124 23 8 0 0 0 6.5773E-09 2 78305 56.599 56.599 1 1.255 1.2656 0 18432000 8166500 10266000 3139 1504 1144 1178 4936;4937 4937 ASGPGLNTTGVPASLPVEFTIDAK 24 1 0 Unmodified _ASGPGLNTTGVPASLPVEFTIDAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1176.1246 2 1171.61555 2341.21654 57438.46 0.33956 0.00039784 0.16573 0.00019417 0.50529 0.00059201 1172.11720559037 1175.6230593496 120.84 0.35972 120.84 120.65 121.01 -7.6294E-06 128 23 9 0 0 0 1.2256E-08 2 79837 51.771 51.771 1 1.2314 1.2458 0 16450000 7293600 9156300 3140 1504 1144 1178 4938;4939 4938 ASGPGLNTTGVPASLPVEFTIDAK 24 1 0 Unmodified _ASGPGLNTTGVPASLPVEFTIDAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1176.1238 2 1171.61555 2341.21654 56950.24 0.20573 0.00024103 -0.47099 -0.00055181 -0.26526 -0.00031078 1172.1170933509 1176.12388883291 133.87 0.3808 133.87 133.64 134.02 0 94 14 10 0 0 0 6.9878E-09 1 81613 56.25 56.25 1 5.564 4.4525 0 8704000 1257500 7446500 3141 1504 1144 1178 4940 4940 ASGPPVSELITK 12 1 0 Unmodified _ASGPPVSELITK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8379 2 599.837528 1197.6605 77446.86 0.609 0.0003653 -0.89112 -0.00053453 -0.28213 -0.00016923 599.838103860041 603.844171888667 72.825 3.1774 72.825 72.415 75.593 0 2106 268 12 0 0 0 8.1667E-18 8 43020 141.89 106.73 1 0.96304 1.1945 0 8903000000 4495700000 4407300000 3142 656;1490 1145 1179 4941;4942;4943;4944;4945;4946;4947;4948 4944 ASGPPVSELITK 12 1 0 Unmodified _ASGPPVSELITK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8392 2 599.837528 1197.6605 NaN NaN NaN 0.82716 0.00049616 NaN NaN NaN NaN 75.656 1.3471 75.656 75.378 76.725 0 0 0 0 0.040925 1 44827 43.544 21.458 1 NaN NaN 0 13412000 13412000 0 3143 656;1490 1145 1179 4949 4949 ASGPPVSELITK 12 1 0 Unmodified _ASGPPVSELITK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8376 2 599.837528 1197.6605 77782.91 0.47519 0.00028503 -0.76427 -0.00045844 -0.28908 -0.0001734 599.838122055063 603.844202213942 71.358 3.1451 71.358 71.04 74.185 0 2107 263 12 0 0 0 4.3315E-48 9 43177 194.49 155.26 1 0.97848 1.1641 0 10139000000 5031700000 5107600000 3144 656;1490 1145 1179 4950;4951;4952;4953;4954;4955;4956;4957;4958 4954 ASGPPVSELITK 12 1 0 Unmodified _ASGPPVSELITK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.8455 2 599.837528 1197.6605 78849.45 0.7614 0.00045672 0.52388 0.00031424 1.2853 0.00077096 599.837631253801 603.84490500713 74.438 1.018 74.438 73.803 74.821 0 203 87 6 0 0 0 0.0055552 1 44709 50.648 35.974 1 0.86523 0.87977 0 30267000 14385000 15882000 3145 656;1490 1145 1179 4959 4959 ASGPPVSELITK 12 1 0 Unmodified _ASGPPVSELITK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8392 2 599.837528 1197.6605 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.266 1 75.266 74.766 75.766 -7.6294E-06 0 0 0 0.028376 1 45344 46.706 24.62 1 3146 656;1490 1145 1179 4960 4960 ASGPPVSELITK 12 1 0 Unmodified _ASGPPVSELITK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.8445 2 599.837528 1197.6605 77696.3 0.46149 0.00027682 -1.1521 -0.00069108 -0.69063 -0.00041426 599.837217944454 603.844136828497 83.342 5.5169 83.342 82.391 87.907 0 2033 370 12 0 0 0 0.0017853 6 45221 60.255 38.806 1 0.5889 0.53947 0 1388900000 862730000 526190000 3147 656;1490 1145 1179 4961;4962;4963;4964;4965;4966 4961 ASGSGGGSAALGPSGFGPSGGSGTK 25 1 0 Unmodified _ASGSGGGSAALGPSGFGPSGGSGTK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1;A0A140T9V2 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1004.9727 2 1004.47196 2006.92936 NaN NaN NaN -0.12165 -0.00012219 NaN NaN NaN NaN 53.683 0.33438 53.683 53.52 53.855 3.8147E-06 0 0 0 2.4341E-12 1 29979 71.354 65.509 1 NaN NaN 0 20566000 20566000 0 3148 367 1146 1180 4967 4967 ASGSGGGSAALGPSGFGPSGGSGTK 25 1 0 Unmodified _ASGSGGGSAALGPSGFGPSGGSGTK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1;A0A140T9V2 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1008.482 2 1004.47196 2006.92936 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.625 1 53.625 53.125 54.125 0 0 0 0 2.4298E-42 1 30028 143.28 128.86 1 3149 367 1146 1180 4968 4968 ASGSGGGSAALGPSGFGPSGGSGTK 25 1 0 Unmodified _ASGSGGGSAALGPSGFGPSGGSGTK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1;A0A140T9V2 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1004.4723 2 1004.47196 2006.92936 NaN NaN NaN 0.096628 9.706E-05 NaN NaN NaN NaN 52.684 0.48716 52.684 52.386 52.873 0 0 0 0 0.0014357 1 29904 40.187 35.385 1 NaN NaN 0 12237000 12237000 0 3150 367 1146 1180 4969 4969 ASGSGGGSAALGPSGFGPSGGSGTK 25 1 0 Unmodified _ASGSGGGSAALGPSGFGPSGGSGTK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1;A0A140T9V2 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1004.972 2 1004.47196 2006.92936 61678.47 0.0095007 9.5432E-06 0.1185 0.00011903 0.12801 0.00012858 1004.97375060593 1008.98050333426 62.942 0.53508 62.942 62.657 63.192 0 200 41 6 0 0 0 0.040205 1 31555 20.737 20.737 1 1.2192 0.99432 0 5770300 2757200 3013100 3151 367 1146 1180 4970 4970 ASGTGTCLNLGSK 13 1 0 Unmodified _ASGTGTCLNLGSK_ 0 0 0 REV__H0Y9H7 REV__H0Y9H7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3099 2 633.311351 1264.60815 73519.95 0.57564 0.00036456 -0.2044 -0.00012945 0.37124 0.00023511 633.309286874899 637.316468227252 28.106 0.45229 28.106 27.922 28.374 0 129 23 12 0 0 0 0.00035282 1 13296 63.076 14.281 1 0.7773 0.88291 0 142620000 86442000 56176000 + 3152 2155 1147 1181 4971 4971 ASHLLETLLCK 11 1 0 Unmodified _ASHLLETLLCK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 431.5758 3 428.904196 1283.69076 93753.16 0.1476 6.3305E-05 0.84505 0.00036245 0.99265 0.00042575 428.904785549175 431.575883209932 86.326 0.72478 86.326 85.919 86.644 0 152 57 4 0 0 0 0.033929 1 52049 26.412 22.767 1 0.94103 0.98301 0 16733000 8293800 8439100 3153 836;1683 1148 1182 4972 4972 ASHNNTQIQVVSASNEPLAFASCGTEGFR 29 0 1 Unmodified _ASHNNTQIQVVSASNEPLAFASCGTEGFR_ 0 0 0 Q53GJ8;Q53FX9;P82912 Q53GJ8 Q53GJ8 MRPS11 28S ribosomal protein S11, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1035.4899 3 1031.48786 3091.44176 59291.69 0.44076 0.00045464 -0.035788 -3.6915E-05 0.40497 0.00041772 1032.15742933457 1035.15783299317 112.74 0.25394 112.74 112.6 112.85 0 38 10 7 0 0 0 0.00038235 3 64635 28.365 26.435 1 1.3984 1.2028 0 2783100 1145600 1637500 3154 1669 1149 1183 4973;4974;4975 4973 ASINMLR 7 0 1 Oxidation (M) _ASINM(ox)LR_ ASINM(1)LR ASINM(77.37)LR 0 1 0 A0A024R814;P18124;A8MUD9;C9JIJ5 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.725 2 410.720913 819.427273 94725.13 0.063299 2.5998E-05 -0.0085409 -3.5079E-06 0.054758 2.249E-05 410.720993343697 415.724936046618 27.514 0.54227 27.514 27.295 27.838 0 151 34 6 0 0 0 0.01295 2 12682 77.374 14.66 1 2.3126 2.62 0 106240000 29422000 76818000 3155 240 1150 1184 4976;4977 4976 180 ASINMLR 7 0 1 Oxidation (M) _ASINM(ox)LR_ ASINM(1)LR ASINM(75.31)LR 0 1 0 A0A024R814;P18124;A8MUD9;C9JIJ5 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 410.7212 2 410.720913 819.427273 NaN NaN NaN 0.33657 0.00013824 NaN NaN NaN NaN 28.522 0.51108 28.522 28.23 28.742 0 0 0 0 0.010053 1 13445 75.311 12.596 1 NaN NaN 0 74559000 74559000 0 3156 240 1150 1184 4978 4978 180 ASINMLR 7 0 1 Oxidation (M) _ASINM(ox)LR_ ASINM(1)LR ASINM(77.37)LR 0 1 0 A0A024R814;P18124;A8MUD9;C9JIJ5 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.725 2 410.720913 819.427273 92223.45 0.17564 7.2138E-05 0.63898 0.00026244 0.81462 0.00033458 410.720951943557 415.725454917939 27.096 0.63928 27.096 26.822 27.461 -1.9073E-06 102 31 6 0 0 0 0.01295 2 12394 77.374 14.66 1 2.2901 2.6139 0 145000000 43683000 101320000 3157 240 1150 1184 4979;4980 4979 180 ASINMLR 7 0 1 Oxidation (M) _ASINM(ox)LR_ ASINM(1)LR ASINM(98.81)LR 0 1 0 A0A024R814;P18124;A8MUD9;C9JIJ5 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.7208 2 410.720913 819.427273 NaN NaN NaN 0.26574 0.00010914 NaN NaN NaN NaN 27.941 0.4233 27.941 27.688 28.111 -1.9073E-06 0 0 0 0.0064223 1 13145 98.807 33.135 1 NaN NaN 0 96130000 96130000 0 3158 240 1150 1184 4981 4981 180 ASINMLR 7 0 1 Oxidation (M) _ASINM(ox)LR_ ASINM(1)LR ASINM(45.88)LR 0 1 0 A0A024R814;P18124;A8MUD9;C9JIJ5 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 410.7209 2 410.720913 819.427273 NaN NaN NaN 0.18023 7.4026E-05 NaN NaN NaN NaN 31.985 0.43312 31.985 31.797 32.23 -1.9073E-06 0 0 0 0.026221 1 13637 45.882 8.9069 1 NaN NaN 0 3440000 3440000 0 3159 240 1150 1184 4982 4982 180 ASINMLR 7 0 1 Unmodified _ASINMLR_ 0 0 0 A0A024R814;P18124;A8MUD9;C9JIJ5 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 402.7229 2 402.723455 803.432358 97912.88 0.20161 8.1195E-05 0.40889 0.00016467 0.6105 0.00024586 402.723402944028 407.72756246989 47.379 0.7308 47.379 47.051 47.782 0 185 65 5 0 0 0 0.032358 1 25613 65.672 20.951 1 0.59328 0.60443 0 27143000 15884000 11260000 3160 240 1150 1185 4983 4983 ASITALEAK 9 1 0 Unmodified _ASITALEAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.2677 2 452.260925 902.507297 89552.47 0.1979 8.9502E-05 -0.057457 -2.5986E-05 0.14044 6.3516E-05 452.260798171117 456.267935225976 43.836 0.91523 43.836 43.454 44.369 0 352 81 6 0 0 0 0.0021086 2 23396 76.679 36.966 1 1.7107 1.9524 0 177850000 66201000 111650000 3161 81 1151 1186 4984;4985 4984 ASITALEAK 9 1 0 Unmodified _ASITALEAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.2609 2 452.260925 902.507297 90772.27 0.40867 0.00018482 0.26603 0.00012032 0.6747 0.00030514 452.2610051662 456.268133048179 43.309 0.53122 43.309 43.256 43.788 0 194 42 7 0 0 0 0.01379 1 23512 56.258 30.365 1 1.615 1.8135 0 116370000 40985000 75381000 3162 81 1151 1186 4986 4986 ASITALEAK 9 1 0 Unmodified _ASITALEAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.2679 2 452.260925 902.507297 NaN NaN NaN 0.013751 6.2189E-06 NaN NaN NaN NaN 43.222 0.5137 43.222 42.743 43.256 -3.8147E-06 0 0 0 0.008522 1 23249 68.016 26.14 1 NaN NaN 0 83975000 0 83975000 3163 81 1151 1186 4987 4987 ASITALEAK 9 1 0 Unmodified _ASITALEAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 456.2678 2 452.260925 902.507297 89332.63 0.041859 1.8931E-05 0.21497 9.7223E-05 0.25683 0.00011615 452.260979081057 456.268011959655 50.688 0.97874 50.688 50.165 51.143 3.8147E-06 309 70 6 0 0 0 0.01379 1 24831 56.258 32.939 1 2.7155 2.1747 0 8540000 2328500 6211500 3164 81 1151 1186 4988 4988 ASITALEAK 9 1 0 Unmodified _ASITALEAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 456.2679 2 452.260925 902.507297 88929.73 -0.22405 -0.00010133 0.36794 0.0001664 0.14389 6.5074E-05 452.261009245555 456.268117519397 50.92 0.92804 50.92 50.409 51.337 3.8147E-06 321 66 7 0 0 0 0.012016 2 24391 57.859 28.689 1 2.8346 2.3095 0 7509200 1741300 5767800 3165 81 1151 1186 4989;4990 4990 ASITPGTILIILTGR 15 0 1 Unmodified _ASITPGTILIILTGR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.442 2 763.469241 1524.92393 70073.25 0.41541 0.00031715 0.39675 0.0003029 0.81216 0.00062006 763.469803263672 768.473550737223 133.61 0.28998 133.61 133.54 133.83 0 28 7 6 0 0 0 1.3115E-47 3 87618 183.37 183.37 1 0.8981 1.0648 0 558530000 292980000 265550000 3166 342 1152 1187 4991;4992;4993 4991 ASITPGTILIILTGR 15 0 1 Unmodified _ASITPGTILIILTGR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.4736 2 763.469241 1524.92393 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.67 1 133.67 133.17 134.17 0 0 0 0 0.0093275 1 89894 48.659 28.356 1 3167 342 1152 1187 4994 4994 ASITPGTILIILTGR 15 0 1 Unmodified _ASITPGTILIILTGR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 764.915 2 763.469241 1524.92393 NaN NaN NaN -0.77808 -0.00059404 NaN NaN NaN NaN 134.93 0.20032 134.93 134.85 135.05 0 0 0 0 0.016076 1 81707 58.674 40.615 1 NaN NaN 0 217500000 217500000 0 3168 342 1152 1187 4995 4995 ASLCISTK 8 1 0 Unmodified _ASLCISTK_ 0 0 0 A0A024R3T8;P09874;B4E0E1 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.2406 2 440.233853 878.453153 90030.82 0.32512 0.00014313 0.20616 9.0758E-05 0.53128 0.00023389 440.233832439125 444.24084216372 35.878 0.74789 35.878 35.465 36.213 0 294 70 6 0 0 0 0.025194 1 18053 55.37 18.669 1 0.66644 0.74706 0 65047000 36157000 28890000 3169 139 1153 1188 4996 4996 ASLCISTK 8 1 0 Unmodified _ASLCISTK_ 0 0 0 A0A024R3T8;P09874;B4E0E1 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.2338 2 440.233853 878.453153 88479.26 0.43184 0.00019011 0.027491 1.2102E-05 0.45933 0.00020221 440.233719369367 444.240878854225 35.117 0.59097 35.117 34.784 35.375 0 217 52 6 0 0 0 0.0038362 2 17861 95.531 36.549 1 0.64403 0.71994 0 102330000 61382000 40952000 3170 139 1153 1188 4997;4998 4998 ASLCISTK 8 1 0 Unmodified _ASLCISTK_ 0 0 0 A0A024R3T8;P09874;B4E0E1 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 440.2338 2 440.233853 878.453153 91291.34 -0.19192 -8.449E-05 0.3701 0.00016293 0.17818 7.8441E-05 440.233971414659 444.241013217715 40.605 0.85143 40.605 40.174 41.025 0 241 68 5 0 0 0 0.051822 2 18694 43.083 19.051 1 1.1777 0.9356 0 10077000 4617700 5459500 3171 139 1153 1188 4999;5000 5000 ASLEAAIADAEQR 13 0 1 Unmodified _ASLEAAIADAEQR_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.8419 2 672.84133 1343.66811 74515.53 0.83978 0.00056504 0.89195 0.00060014 1.7317 0.0011652 672.84159314044 677.845542542816 79.672 1.0089 79.672 79.199 80.207 -7.6294E-06 493 87 8 0 0 0 3.7855E-30 2 47048 166.69 139.58 1 1.0697 1.2673 0 465230000 234220000 231010000 + 3172 1156 1154 1189 5001;5002 5001 ASLEAAIADAEQR 13 0 1 Unmodified _ASLEAAIADAEQR_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8461 2 672.84133 1343.66811 74376.07 0.41292 0.00027783 0.80422 0.00054112 1.2171 0.00081894 672.841667446056 677.845575085448 78.509 0.90297 78.509 78.169 79.072 0 458 79 8 0 0 0 4.6309E-30 2 47532 164.65 138.71 1 1.0586 1.2401 0 706160000 326330000 379830000 + 3173 1156 1154 1189 5003;5004 5004 ASLEAAIADAEQR 13 0 1 Unmodified _ASLEAAIADAEQR_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 677.8467 2 672.84133 1343.66811 72190.59 0.60215 0.00040515 0.4668 0.00031408 1.0689 0.00071923 672.841582090998 677.845613381124 92.11 1.2328 92.11 91.531 92.763 0 414 72 10 0 0 0 1.3453E-18 2 51109 138.99 110.79 1 1.8742 1.617 0 79523000 28445000 51077000 + 3174 1156 1154 1189 5005;5006 5005 ASLEAAIADAEQR 13 0 1 Unmodified _ASLEAAIADAEQR_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.841 2 672.84133 1343.66811 71627.32 0.43877 0.00029522 0.49286 0.00033162 0.93164 0.00062684 672.841537270625 677.845608660851 92.024 1.1055 92.024 91.558 92.664 7.6294E-06 384 60 9 0 0 0 0.00012004 2 50271 90.913 70.923 1 1.9532 1.7045 0 70320000 23811000 46509000 + 3175 1156 1154 1189 5007;5008 5008 ASLEAAIADAEQRGELAIK 19 1 1 Unmodified _ASLEAAIADAEQRGELAIK_ 0 0 1 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.0198 3 652.684733 1955.03237 74351.29 0.87139 0.00056875 0.021543 1.4061E-05 0.89294 0.00058281 653.018850632447 658.692245237505 118.69 0.42181 118.69 118.48 118.9 0 140 21 9 0 0 0 0.0076605 1 70094 23.892 23.892 1 2.0553 1.787 0 19011000 5952900 13058000 + 3176 1156 1155 1190 5009 5009 ASLEAAIADAEQRGELAIK 19 1 1 Unmodified _ASLEAAIADAEQRGELAIK_ 0 0 1 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 987.5346 2 978.523461 1955.03237 62032.8 0.34315 0.00033578 0.35436 0.00034675 0.69751 0.00068253 979.024806858147 987.534681934456 118.7 0.32034 118.7 118.51 118.83 0 80 16 6 0 0 0 0.031839 1 70095 30.905 27.955 1 2.1729 1.8103 0 6193900 2086100 4107800 + 3177 1156 1155 1190 5010 5010 ASLEDAPVDDLTR 13 0 1 Unmodified _ASLEDAPVDDLTR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3511 2 701.346446 1400.67834 NaN NaN NaN -1.1508 -0.00080713 NaN NaN NaN NaN 77.656 0.72554 77.656 77.174 77.9 0 0 0 0 4.3433E-29 1 45819 147.91 118.95 1 NaN NaN 0 16771000 0 16771000 3178 1873 1156 1191 5011 5011 ASLEDAPVDDLTR 13 0 1 Unmodified _ASLEDAPVDDLTR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.3526 2 701.346446 1400.67834 72999.05 0.44028 0.00030879 -1.0204 -0.00071568 -0.58017 -0.0004069 701.346526424027 706.350616072867 76.715 0.77382 76.715 76.195 76.968 0 238 59 9 0 0 0 1.6145E-06 2 46218 110.66 83.547 1 1.38 1.5114 0 32080000 13360000 18721000 3179 1873 1156 1191 5012;5013 5012 ASLEGNLAETENR 13 0 1 Unmodified _ASLEGNLAETENR_ 0 0 0 CON__Q04695;Q04695;F5GWP8;Q14666 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.3424 2 702.341694 1402.66884 NaN NaN NaN -0.14929 -0.00010485 NaN NaN NaN NaN 44.215 0.66618 44.215 43.828 44.494 -3.8147E-06 0 0 0 6.4398E-05 1 24026 92.112 69.372 1 NaN NaN 0 24505000 24505000 0 + 3180 1168 1157 1192 5014 5014 ASLEGNLAETENR 13 0 1 Unmodified _ASLEGNLAETENR_ 0 0 0 CON__Q04695;Q04695;F5GWP8;Q14666 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.341 2 702.341694 1402.66884 70294.04 0.38772 0.00027231 0.70604 0.00049588 1.0938 0.0007682 702.342360579975 707.346017655258 53.005 0.81454 53.005 52.572 53.387 0 275 60 8 0 0 0 0.011738 1 25614 54.005 43.773 1 0.61259 0.51021 0 7013800 4059700 2954000 + 3181 1168 1157 1192 5015 5015 ASLENSLEETK 11 1 0 Unmodified _ASLENSLEETK_ 0 0 0 CON__P02533;P02533;A0A024R1X6;Q13092;CON__Q9Z2K1;CON__Q3ZAW8;CON__P08779;P08779;Q16195;K7ENW6 CON__P02533;CON__P08779 CON__P02533 KRT14;K14;KRT16;keratin Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.8043 2 610.803882 1219.59321 NaN NaN NaN 0.053159 3.247E-05 NaN NaN NaN NaN 44.177 0.85953 44.177 43.929 44.789 0 0 0 0 1.1208E-51 1 24091 182.39 144.66 1 NaN NaN 0 138790000 138790000 0 + 3182 1150;1159 1158 1193 5016 5016 ASLENSLEETK 11 1 0 Unmodified _ASLENSLEETK_ 0 0 0 CON__P02533;P02533;A0A024R1X6;Q13092;CON__Q9Z2K1;CON__Q3ZAW8;CON__P08779;P08779;Q16195;K7ENW6 CON__P02533;CON__P08779 CON__P02533 KRT14;K14;KRT16;keratin Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.804 2 610.803882 1219.59321 NaN NaN NaN 0.80932 0.00049434 NaN NaN NaN NaN 53.036 0.84745 53.036 52.675 53.523 -3.8147E-06 0 0 0 2.8682E-05 1 25643 101.97 88.395 1 NaN NaN 0 18492000 18492000 0 + 3183 1150;1159 1158 1193 5017 5017 ASLENSLR 8 0 1 Unmodified _ASLENSLR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 445.2402 2 445.240524 888.466495 87554.27 -0.047857 -2.1308E-05 -0.24578 -0.00010943 -0.29364 -0.00013074 445.240186944084 450.244711126378 33.017 1.0385 33.017 32.458 33.497 0 336 95 5 0 0 0 0.040852 1 16399 47.082 8.1193 1 0.85431 0.95025 0 43397000 22861000 20536000 3184 316 1159 1194 5018 5018 ASLGPLQSK 9 1 0 Unmodified _ASLGPLQSK_ 0 0 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.7609 2 450.761092 899.507631 84987.77 0.12453 5.6133E-05 -2.0112 -0.00090658 -1.8867 -0.00085045 450.761059123809 454.767822659026 39.296 0.65363 39.296 38.908 39.562 0 228 56 6 0 0 0 0.012691 1 20671 57.249 32.159 1 0.81301 0.8933 0 41931000 25757000 16174000 3185 1924 1160 1195 5019 5019 ASLGPLQSK 9 1 0 Unmodified _ASLGPLQSK_ 0 0 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 454.7681 2 450.761092 899.507631 90714.66 0.10768 4.8538E-05 -0.29838 -0.0001345 -0.1907 -8.5959E-05 450.760953205143 454.767906897439 45.206 0.53567 45.206 44.923 45.458 0 155 38 6 0 0 0 0.032638 1 21582 44.98 24.46 1 1.6025 1.2707 0 4351400 1695200 2656200 3186 1924 1160 1195 5020 5020 ASLIEEDEPAEK 12 1 0 Unmodified _ASLIEEDEPAEK_ 0 0 0 B2R5U7 B2R5U7 B2R5U7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.8225 2 665.822272 1329.62999 74729.44 0.84119 0.00056009 0.32806 0.00021843 1.1693 0.00077851 665.822384585025 669.829625636389 46.531 0.6898 46.531 46.149 46.839 -3.8147E-06 288 59 7 0 0 0 3.0918E-08 2 25074 118.4 100.78 1 0.9821 1.1135 0 96327000 42106000 54221000 3187 836 1161 1196 5021;5022 5022 ASLIEEDEPAEK 12 1 0 Unmodified _ASLIEEDEPAEK_ 0 0 0 B2R5U7 B2R5U7 B2R5U7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.8227 2 665.822272 1329.62999 74266.59 0.70393 0.00046869 0.49448 0.00032924 1.1984 0.00079793 665.822395972146 669.830121991866 45.552 0.71223 45.552 45.244 45.956 0 349 62 9 0 0 0 1.8475E-12 2 24935 125.74 113.45 1 0.88893 0.99536 0 110480000 58815000 51666000 3188 836 1161 1196 5023;5024 5023 ASLIEEDEPAEK 12 1 0 Unmodified _ASLIEEDEPAEK_ 0 0 0 B2R5U7 B2R5U7 B2R5U7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.8232 2 665.822272 1329.62999 74571.15 0.59361 0.00039524 0.68748 0.00045774 1.2811 0.00085298 665.822366862813 669.830096740924 53.698 0.94337 53.698 53.403 54.347 0 284 72 7 0 0 0 9.6174E-05 2 26670 96.015 96.015 1 1.0148 0.80103 0 17936000 8263200 9672700 3189 836 1161 1196 5025;5026 5026 ASLIEEDEPAEK 12 1 0 Unmodified _ASLIEEDEPAEK_ 0 0 0 B2R5U7 B2R5U7 B2R5U7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.8231 2 665.822272 1329.62999 74683.23 0.43954 0.00029266 0.85178 0.00056714 1.2913 0.00085979 665.822547321667 669.830170382618 54.163 0.92261 54.163 53.868 54.79 0 263 68 6 0 0 0 0.00019797 1 26387 78.342 78.342 1 1.0856 0.88623 0 12746000 5971200 6774700 3190 836 1161 1196 5027 5027 ASLLDDYQLPEILR 14 0 1 Unmodified _ASLLDDYQLPEILR_ 0 0 0 H7C5F5;E7EWK3;B7Z8P5;Q9H2U1 H7C5F5 H7C5F5 DHX36 ATP-dependent RNA helicase DHX36 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.9129 2 823.44342 1644.87229 68077.78 0.66742 0.00054958 -0.10319 -8.4975E-05 0.56422 0.0004646 823.444269243897 828.948577438843 125.09 0.54819 125.09 124.8 125.35 0 117 36 5 0 0 0 0.00069613 1 81307 68.069 68.069 1 1.2517 1.243 0 8391400 4777400 3614000 3191 1104 1162 1197 5028 5028 ASLLQLTR 8 0 1 Unmodified _ASLLQLTR_ 0 0 0 B4E086;K7EJH0;K7EMX1;K7EJV2;K7ESQ2 B4E086 B4E086 SPC24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.2773 2 451.276909 900.539266 97073.31 0.097461 4.3982E-05 -0.12394 -5.5929E-05 -0.026474 -1.1947E-05 451.277228839514 456.280554611862 73.526 0.32762 73.526 73.399 73.726 0 88 30 4 0 0 0 0.00092625 2 43103 125.58 51.968 1 0.79417 0.81364 0 19172000 11716000 7455700 3192 1061 1163 1198 5029;5030 5029 ASLLQLTR 8 0 1 Unmodified _ASLLQLTR_ 0 0 0 B4E086;K7EJH0;K7EMX1;K7EJV2;K7ESQ2 B4E086 B4E086 SPC24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.2771 2 451.276909 900.539266 97874.88 -0.14887 -6.7181E-05 -0.12636 -5.7024E-05 -0.27523 -0.0001242 451.277274857087 456.280590824934 72.103 0.33034 72.103 71.968 72.299 0 81 29 4 0 0 0 0.00045427 2 43250 132.08 59.295 1 0.95993 0.99791 0 22102000 11626000 10475000 3193 1061 1163 1198 5031;5032 5032 ASLLTDEEDVDMALDQR 17 0 1 Oxidation (M) _ASLLTDEEDVDM(ox)ALDQR_ ASLLTDEEDVDM(1)ALDQR ASLLTDEEDVDM(63.09)ALDQR 0 1 0 P52948;H7C3P6;A0A024RCC4 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 973.9481 2 968.943852 1935.87315 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.373 1 98.373 97.873 98.873 -7.6294E-06 0 0 0 0.00022513 1 61530 63.091 44.955 1 3194 1603 1164 1199 5033 5033 1389 ASLNGADIYSGCCTLK 16 1 0 Unmodified _ASLNGADIYSGCCTLK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0R1W6;B4DVF8;B4DPK8 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.4056 2 865.397829 1728.78111 66576.88 0.73136 0.00063292 0.23302 0.00020165 0.96438 0.00083457 865.397391849267 869.906914481205 73.161 0.3917 73.161 72.985 73.376 0 72 35 4 0 0 0 8.8014E-05 1 42845 80.469 71.361 1 1.3148 1.3683 0 11567000 4928300 6638800 3195 865 1165 1200 5034 5034 ASLNGADIYSGCCTLK 16 1 0 Unmodified _ASLNGADIYSGCCTLK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0R1W6;B4DVF8;B4DPK8 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.4044 2 865.397829 1728.78111 67980.69 0.46863 0.00040555 0.080793 6.9918E-05 0.54943 0.00047547 865.39763649047 869.907083866182 72.199 0.35703 72.199 71.999 72.356 0 104 31 5 0 0 0 1.7104E-06 2 43241 94.688 87.989 1 1.6296 1.7008 0 24366000 12197000 12170000 3196 865 1165 1200 5035;5036 5035 ASLNGADIYSGCCTLK 16 1 0 Unmodified _ASLNGADIYSGCCTLK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0R1W6;B4DVF8;B4DPK8 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 869.405 2 865.397829 1728.78111 65294.45 0.50294 0.00043525 0.28213 0.00024416 0.78508 0.0006794 865.899077650826 869.907181300717 84.173 0.40302 84.173 84.046 84.449 0 111 30 5 0 0 0 0.045393 1 45085 35.006 29.161 1 0.93612 0.73228 0 3719000 2034000 1684900 3197 865 1165 1200 5037 5037 ASLNPSDTPPSVVNEDFLHDLK 22 1 0 Unmodified _ASLNPSDTPPSVVNEDFLHDLK_ 0 0 0 A0A1B0GWA2;B7Z3Q4;O00116;B7ZAC5;Q53SG6 A0A1B0GWA2 A0A1B0GWA2 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.7347 3 799.06405 2394.17032 69882.48 0.84497 0.00067519 -0.28427 -0.00022715 0.5607 0.00044803 799.398129711598 801.735084280254 107.61 0.4044 107.61 107.4 107.81 -7.6294E-06 123 28 7 0 0 0 0.013126 2 68728 20.757 20.757 1 1.1182 1.1292 0 13231000 6319200 6912000 3198 635 1166 1201 5038;5039 5039 ASLPCSQEEATGGAK 15 1 0 Unmodified _ASLPCSQEEATGGAK_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.8569 2 753.348662 1504.68277 80230.9 0.70095 0.00052806 0.014287 1.0763E-05 0.71524 0.00053882 753.348838325573 757.355834184514 28.041 0.13627 28.041 27.943 28.079 0 30 10 4 0 0 0 0.011823 1 13153 34.386 34.386 1 0.99175 1.0067 0 6132800 2849100 3283700 3199 646 1167 1202 5040 5040 ASLPCSQEEATGGAK 15 1 0 Unmodified _ASLPCSQEEATGGAK_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.8574 2 753.348662 1504.68277 70465.73 0.28392 0.00021389 -0.30981 -0.00023339 -0.02589 -1.9504E-05 753.348612932262 757.354772130539 27.432 0.25512 27.432 27.269 27.524 0 24 12 4 0 0 0 0.0084689 1 12722 35.677 35.677 1 0.97526 0.98728 0 13029000 6158500 6870900 3200 646 1167 1202 5041 5041 ASLPLVLYIDR 11 0 1 Unmodified _ASLPLVLYIDR_ 0 0 0 B7ZL72;E9PLV1;Q9NQV6 B7ZL72 B7ZL72 PRDM10 PR domain zinc finger protein 10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3762 2 630.371538 1258.72852 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.63 1 117.63 117.13 118.13 -7.6294E-06 0 0 0 0.043067 1 77200 44.309 16.296 1 3201 1113 1168 1203 5042 5042 ASLSLIEK 8 1 0 Unmodified _ASLSLIEK_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7584 2 430.758018 859.501483 91738.88 0.00022345 9.6254E-08 0.45901 0.00019772 0.45923 0.00019782 430.758275790775 434.76527872117 58.176 0.49555 58.176 57.898 58.393 0 129 36 5 0 0 0 0.033338 1 33712 50.04 13.855 1 1.1065 1.2463 0 58723000 28714000 30009000 3202 769 1169 1204 5043 5043 ASLVSEEEEDEEEDK 15 1 0 Unmodified _ASLVSEEEEDEEEDK_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5;C9JFL7;C9J8L0;C9IZR6 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.3636 2 869.362883 1736.71121 71383.6 0.73917 0.00064261 0.11864 0.00010314 0.85781 0.00074574 869.864254640967 873.370343393627 41.077 0.23808 41.077 40.972 41.21 0 40 19 4 0 0 0 0.00053322 2 21555 55.452 55.452 1 0.5278 0.53468 0 4696100 2701200 1994900 3203 295 1170 1205 5044;5045 5044 ASLVSEEEEDEEEDK 15 1 0 Unmodified _ASLVSEEEEDEEEDK_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5;C9JFL7;C9J8L0;C9IZR6 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.363 2 869.362883 1736.71121 NaN NaN NaN -0.21134 -0.00018374 NaN NaN NaN NaN 40.405 0.28382 40.405 40.176 40.46 0 0 0 0 1.0076E-06 1 21450 93.623 78.933 1 NaN NaN 0 5877300 5877300 0 3204 295 1170 1205 5046 5046 ASLVSEEEEDEEEDK 15 1 0 Unmodified _ASLVSEEEEDEEEDK_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5;C9JFL7;C9J8L0;C9IZR6 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.3713 2 869.362883 1736.71121 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.242 1 40.242 39.742 40.742 0 0 0 0 0.0029896 1 21456 55.452 49.607 1 3205 295 1170 1205 5047 5047 ASLVSEEEEDEEEDK 15 1 0 Unmodified _ASLVSEEEEDEEEDK_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5;C9JFL7;C9J8L0;C9IZR6 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.361 2 869.362883 1736.71121 67083.13 0.23539 0.00020464 -0.15631 -0.00013589 0.079073 6.8744E-05 869.362323057542 873.871519253843 48.383 0.39029 48.383 48.19 48.581 -3.8147E-06 118 30 6 0 0 0 0.054919 1 23585 23.226 23.226 1 1.2332 1.0191 0 2331600 1161200 1170400 3206 295 1170 1205 5048 5048 ASMDVENPDYSEEILK 16 1 0 Oxidation (M) _ASM(ox)DVENPDYSEEILK_ ASM(1)DVENPDYSEEILK ASM(142.12)DVENPDYSEEILK 0 1 0 B3KQ21;Q9NYH9;B3KX32;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 932.9249 2 928.416939 1854.81932 63837.58 0.49872 0.00046302 -0.12438 -0.00011548 0.37434 0.00034754 928.918358009476 932.423897617586 76.782 0.57481 76.782 76.518 77.093 0 331 49 8 0 0 0 5.9309E-25 2 45212 142.12 142.12 1 1.2807 1.3911 0 46668000 22350000 24318000 3207 925 1171 1206 5049;5050 5050 758 ASMDVENPDYSEEILK 16 1 0 Oxidation (M) _ASM(ox)DVENPDYSEEILK_ ASM(1)DVENPDYSEEILK ASM(134.56)DVENPDYSEEILK 0 1 0 B3KQ21;Q9NYH9;B3KX32;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.9194 2 928.416939 1854.81932 63572.8 0.31052 0.00028829 -0.024016 -2.2297E-05 0.2865 0.00026599 928.416924406534 932.42408750618 75.923 0.55122 75.923 75.668 76.219 0 330 51 8 0 0 0 3.4782E-18 2 45704 134.56 126.26 1 1.1887 1.34 0 67682000 26154000 41528000 3208 925 1171 1206 5051;5052 5052 758 ASMQPIQIAEGTGITTR 17 0 1 Oxidation (M) _ASM(ox)QPIQIAEGTGITTR_ ASM(1)QPIQIAEGTGITTR ASM(152.16)QPIQIAEGTGITTR 0 1 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.9613 2 895.459275 1788.904 64545.07 0.38097 0.00034114 0.15682 0.00014042 0.53778 0.00048156 895.459489690143 900.463795646211 77.704 0.64952 77.704 77.39 78.039 0 269 49 7 0 0 0 2.1843E-34 3 45837 152.16 152.16 1 0.78673 0.8035 0 31094000 17883000 13211000 3209 186;1747 1172 1207 5053;5054;5055 5053 149 ASMQPIQIAEGTGITTR 17 0 1 Oxidation (M) _ASM(ox)QPIQIAEGTGITTR_ ASM(1)QPIQIAEGTGITTR ASM(166.62)QPIQIAEGTGITTR 0 1 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.9614 2 895.459275 1788.904 65049.36 0.34721 0.00031091 -0.016313 -1.4608E-05 0.3309 0.00029631 895.459326909638 900.463838194053 76.776 0.65384 76.776 76.452 77.106 0 246 49 7 0 0 0 2.5033E-45 2 46262 166.62 160.39 1 0.84189 0.92106 0 34062000 18192000 15870000 3210 186;1747 1172 1207 5056;5057 5056 149 ASMQPIQIAEGTGITTR 17 0 1 Oxidation (M) _ASM(ox)QPIQIAEGTGITTR_ ASM(1)QPIQIAEGTGITTR ASM(75.59)QPIQIAEGTGITTR 0 1 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 900.4639 2 895.459275 1788.904 65028.11 0.6128 0.00054874 -0.14463 -0.00012951 0.46817 0.00041922 895.459358687641 900.463508364871 89.199 0.74983 89.199 88.764 89.514 0 298 49 8 0 0 0 2.9376E-05 1 49129 75.589 70.494 1 0.71648 0.61065 0 8952000 5503700 3448300 3211 186;1747 1172 1207 5058 5058 149 ASMQPIQIAEGTGITTR 17 0 1 Unmodified _ASMQPIQIAEGTGITTR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 887.962 2 887.461818 1772.90908 65937.95 0.54843 0.00048671 -0.0023042 -2.0449E-06 0.54612 0.00048466 887.461818753269 892.465756130756 106.02 0.45448 106.02 105.78 106.24 -7.6294E-06 95 21 7 0 0 0 0.014873 2 60528 28.632 28.632 1 1.0861 0.90818 0 3696600 1895700 1800900 3212 186;1747 1172 1208 5059;5060 5060 ASMSEFLESEDGEVEQQR 18 0 1 Oxidation (M) _ASM(ox)SEFLESEDGEVEQQR_ ASM(1)SEFLESEDGEVEQQR ASM(83.2)SEFLESEDGEVEQQR 0 1 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1048.9517 2 1043.94712 2085.87969 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.26 1 62.26 61.76 62.76 0 0 0 0 8.9161E-07 1 35734 83.204 77.888 1 3213 1336 1173 1209 5061 5061 1008 ASMSEFLESEDGEVEQQR 18 0 1 Oxidation (M) _ASM(ox)SEFLESEDGEVEQQR_ ASM(1)SEFLESEDGEVEQQR ASM(89.63)SEFLESEDGEVEQQR 0 1 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1043.9473 2 1043.94712 2085.87969 60558.77 0.52158 0.0005445 -0.13119 -0.00013695 0.39039 0.00040755 1044.44862766323 1049.45266795994 61.561 0.53802 61.561 61.313 61.851 -3.8147E-06 258 49 8 0 0 0 4.8689E-08 4 35985 89.629 89.629 1 1.3647 1.3807 0 19967000 7006200 12961000 3214 1336 1173 1209 5062;5063;5064;5065 5063 1008 ASNGDAWVEAHGK 13 1 0 Unmodified _ASNGDAWVEAHGK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;D6RJI2 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.8211 2 671.31274 1340.61093 NaN NaN NaN 0.39608 0.00026589 NaN NaN NaN NaN 24.585 0.27219 24.585 24.479 24.752 0 0 0 0 5.139E-06 2 10328 101.93 75.256 1 NaN NaN 0 9311100 0 9311100 3215 1092 1174 1210 5066;5067 5066 ASNGDAWVEAHGK 13 1 0 Unmodified _ASNGDAWVEAHGK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;D6RJI2 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3208 2 671.31274 1340.61093 74787.99 0.38332 0.00025733 0.39685 0.00026641 0.78017 0.00052374 671.313128479224 675.320097914462 24.27 0.32146 24.27 24.156 24.478 -1.9073E-06 36 13 6 0 0 0 0.00079839 1 10132 60.434 55.983 1 2.4204 2.4405 0 7659200 1820000 5839100 3216 1092 1174 1210 5068 5068 ASNLENSTYDLYTIPK 16 1 0 Unmodified _ASNLENSTYDLYTIPK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.9598 2 914.951806 1827.88906 65558.06 0.78224 0.00071571 -0.18572 -0.00016992 0.59652 0.00054579 915.953841654027 918.958664075505 93.005 0.48273 93.005 92.821 93.304 7.6294E-06 192 41 7 0 0 0 5.0005E-05 1 57598 83.617 75.513 1 1.3168 1.3311 0 26734000 10042000 16691000 3217 1607 1175 1211 5069 5069 ASNLENSTYDLYTIPK 16 1 0 Unmodified _ASNLENSTYDLYTIPK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 914.9494 2 914.951806 1827.88906 65628.41 0.60611 0.00055456 -0.35213 -0.00032218 0.25398 0.00023238 915.452941181797 918.958780400625 107.46 0.44851 107.46 107.22 107.66 7.6294E-06 119 26 7 0 0 0 0.023464 2 61623 27.005 21.282 1 1.0038 0.79202 0 5956600 3010000 2946600 3218 1607 1175 1211 5070;5071 5071 ASNLLLNYK 9 1 0 Unmodified _ASNLLLNYK_ 0 0 0 A8K245;Q99986;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.3026 2 518.295299 1034.57605 86592.48 0.093816 4.8624E-05 0.50215 0.00026026 0.59596 0.00030889 518.295725404392 522.302284352142 69.776 0.80146 69.776 69.415 70.216 0 259 71 6 0 0 0 0.013844 1 40455 65.156 65.156 1 1.4389 1.5301 0 31707000 13816000 17891000 3219 707 1176 1212 5072 5072 ASNLLLNYK 9 1 0 Unmodified _ASNLLLNYK_ 0 0 0 A8K245;Q99986;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.303 2 518.295299 1034.57605 87153.69 0.39767 0.00020611 0.32635 0.00016915 0.72402 0.00037525 518.295632932041 522.30219760723 68.548 0.88864 68.548 68.142 69.031 0 271 73 6 0 0 0 0.004803 1 40605 82.563 82.563 1 1.3201 1.3438 0 30562000 12840000 17721000 3220 707 1176 1212 5073 5073 ASNLLLNYK 9 1 0 Unmodified _ASNLLLNYK_ 0 0 0 A8K245;Q99986;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.3025 2 518.295299 1034.57605 83846.73 0.18908 9.7997E-05 0.48716 0.00025249 0.67623 0.00035049 518.295442444729 522.302552984318 79.952 0.74276 79.952 79.557 80.3 0 217 46 7 0 0 0 0.037216 1 43072 53.753 53.753 1 1.045 0.83815 0 8211700 3901400 4310300 3221 707 1176 1212 5074 5074 ASNLLLNYK 9 1 0 Unmodified _ASNLLLNYK_ 0 0 0 A8K245;Q99986;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.3028 2 518.295299 1034.57605 83141.66 0.19776 0.0001025 0.37198 0.00019279 0.56974 0.0002953 518.295438190681 522.302522372054 80.107 0.7662 80.107 79.728 80.494 0 222 44 7 0 0 0 0.0046012 1 42333 80.219 61.894 1 1.0375 0.84665 0 6249900 2742900 3507100 3222 707 1176 1212 5075 5075 ASNTAEVFFDGVR 13 0 1 Unmodified _ASNTAEVFFDGVR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;A0A077H1I5 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.8448 2 706.843873 1411.67319 72792.2 0.75736 0.00053534 0.13615 9.6238E-05 0.89351 0.00063157 707.344969516743 711.848150860782 89.007 0.75045 89.007 88.621 89.371 0 151 57 5 0 0 0 0.0024841 1 53533 53.569 50.836 1 1.4308 1.49 0 21771000 11317000 10454000 3223 965 1177 1213 5076 5076 ASNTAEVFFDGVR 13 0 1 Unmodified _ASNTAEVFFDGVR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;A0A077H1I5 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.8481 2 706.843873 1411.67319 NaN NaN NaN 0.56995 0.00040287 NaN NaN NaN NaN 87.816 0.37748 87.816 87.554 87.932 -7.6294E-06 0 0 0 0.0044372 2 54092 61.435 51.654 1 NaN NaN 0 7103000 0 7103000 3224 965 1177 1213 5077;5078 5077 ASPITNDGEDEFVPSDGLDK 20 1 0 Unmodified _ASPITNDGEDEFVPSDGLDK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1053.9791 2 1053.47911 2104.94367 61242.03 0.53848 0.00056727 0.57577 0.00060656 1.1142 0.0011738 1053.98133503742 1057.98840291117 88.891 0.32234 88.891 88.71 89.033 7.6294E-06 84 22 5 0 0 0 2.761E-06 2 53577 64.675 64.675 1 0.6747 0.69249 0 12993000 7511100 5481400 3225 1679 1178 1214 5079;5080 5080 ASPITNDGEDEFVPSDGLDKDEYTFSPGK 29 2 0 Unmodified _ASPITNDGEDEFVPSDGLDKDEYTFSPGK_ 0 0 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1049.8151 3 1044.13856 3129.39385 59090.47 0.58744 0.00061337 0.016397 1.7121E-05 0.60384 0.00063049 1044.4730352846 1050.14982167708 112.18 0.42265 112.18 112.01 112.44 0 165 23 10 0 0 0 0.010205 1 65049 22.081 22.081 1 1.1884 1.0159 0 12099000 4680500 7418500 3226 1679 1179 1215 5081 5081 ASPITNDGEDEFVPSDGLDKDEYTFSPGK 29 2 0 Unmodified _ASPITNDGEDEFVPSDGLDKDEYTFSPGK_ 0 0 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1049.816 3 1044.13856 3129.39385 59268.41 0.34676 0.00036207 -0.0062645 -6.541E-06 0.3405 0.00035552 1044.47230759389 1049.81584327331 112.1 0.58274 112.1 111.96 112.54 0 180 31 10 0 0 0 0.016272 2 64210 20.652 20.589 1 1.2091 1.0266 0 5995700 2054400 3941300 3227 1679 1179 1215 5082;5083 5083 ASPLFSQHTAADK 13 1 0 Unmodified _ASPLFSQHTAADK_ 0 0 0 Q2NL82 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.8541 2 686.846416 1371.67828 77296.51 0.6571 0.00045133 -0.30103 -0.00020676 0.35608 0.00024457 686.845926707612 690.853549083634 30.885 0.41169 30.885 30.696 31.107 0 89 37 4 0 0 0 0.013183 1 15113 38.58 34.817 1 1.1517 1.1702 0 10291000 5267700 5023700 3228 1776 1180 1216 5084 5084 ASPPSLEQPYLTHR 14 0 1 Unmodified _ASPPSLEQPYLTHR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.9468 3 532.610728 1594.81036 82414.07 0.38138 0.00020313 -0.1054 -5.6138E-05 0.27598 0.00014699 532.610723869865 535.946815945914 58.947 0.90339 58.947 58.517 59.421 0 427 72 9 0 0 0 0.0027875 1 33400 37.654 27.733 1 0.88205 0.99454 0 99087000 53384000 45703000 3229 809 1181 1217 5085 5085 ASPPSLEQPYLTHR 14 0 1 Unmodified _ASPPSLEQPYLTHR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.9467 3 532.610728 1594.81036 83134.52 0.5232 0.00027866 0.048336 2.5744E-05 0.57154 0.00030441 532.610719350227 535.94680335798 57.699 1.1217 57.699 57.092 58.213 0 503 89 9 0 0 0 0.012895 1 33343 27.767 27.767 1 0.91321 1.044 0 88827000 44629000 44198000 3230 809 1181 1217 5086 5086 ASPPSLEQPYLTHR 14 0 1 Unmodified _ASPPSLEQPYLTHR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.9447 3 532.610728 1594.81036 80872.4 0.38399 0.00020452 -0.44849 -0.00023887 -0.064495 -3.4351E-05 532.944720814642 535.946726573052 68.588 1.1095 68.588 68.008 69.117 0 383 80 10 0 0 0 0.026921 1 35840 22.214 18.112 1 1.3061 1.0762 0 18361000 7724600 10636000 3231 809 1181 1217 5087 5087 ASPPSLEQPYLTHR 14 0 1 Unmodified _ASPPSLEQPYLTHR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.6108 3 532.610728 1594.81036 81372.57 0.42979 0.00022891 -0.41921 -0.00022328 0.010583 5.6365E-06 532.610296665494 535.946696453988 69.019 0.92502 69.019 68.505 69.43 7.6294E-06 371 64 8 0 0 0 0.024987 2 35305 22.606 20.783 1 1.4095 1.1499 0 12820000 5790000 7030100 3232 809 1181 1217 5088;5089 5089 ASPSFEER 8 0 1 Unmodified _ASPSFEER_ 0 0 0 B3GQE6;Q53G15 B3GQE6 B3GQE6 DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7211 2 461.716882 921.41921 88692.82 0.24275 0.00011208 0.036484 1.6845E-05 0.27924 0.00012893 461.716767750134 466.720866941651 24.133 0.52488 24.133 23.954 24.479 0 92 22 7 0 0 0 0.0080668 1 9895 80.229 68.508 1 1.0116 1.0935 0 48827000 22505000 26322000 3233 899 1182 1218 5090 5090 ASPSLERPEK 10 1 1 Acetyl (Protein N-term) _(ac)ASPSLERPEK_ 1 0 1 Q13601;B4DMS5 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.316 2 578.303852 1154.59315 78517.78 0.52363 0.00030282 -0.21027 -0.0001216 0.31336 0.00018122 578.303213855654 587.315152619292 31.105 0.58381 31.105 30.878 31.462 0 169 49 4 0 0 0 0.00049639 1 15244 86.898 71.638 1 1.4051 1.6366 0 43116000 18323000 24793000 3234 1717 1183 1219 5091 5091 ASPSLERPEK 10 1 1 Acetyl (Protein N-term) _(ac)ASPSLERPEK_ 1 0 1 Q13601;B4DMS5 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.3151 2 578.303852 1154.59315 81585.58 0.41637 0.00024079 0.20342 0.00011764 0.61979 0.00035843 578.303801212689 587.315130555552 36.479 0.62098 36.479 36.15 36.771 0 199 54 5 0 0 0 0.0042488 1 15899 63.184 63.184 1 1.6401 1.3791 0 4523700 1615800 2907900 3235 1717 1183 1219 5092 5092 ASPSPTDPVVPAVPIGPPPAGFR 23 0 1 Unmodified _ASPSPTDPVVPAVPIGPPPAGFR_ 0 0 0 A0A024R5C5;P11498 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1118.6049 2 1113.5995 2225.18445 58653.98 0.48773 0.00054314 0.56034 0.000624 1.0481 0.0011671 1114.1014851243 1118.60403270058 117.16 0.35751 117.16 117.01 117.36 0 92 27 5 0 0 0 2.9352E-05 2 74897 41.644 41.644 1 1.6483 1.725 0 12800000 5741600 7058100 3236 176 1184 1220 5093;5094 5093 ASPSPTDPVVPAVPIGPPPAGFR 23 0 1 Unmodified _ASPSPTDPVVPAVPIGPPPAGFR_ 0 0 0 A0A024R5C5;P11498 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1119.1071 2 1113.5995 2225.18445 NaN NaN NaN 0.66508 0.00074063 NaN NaN NaN NaN 116.7 0.35136 116.7 116.52 116.87 -7.6294E-06 0 0 0 8.6304E-06 1 76400 54.524 49.541 1 NaN NaN 0 6695800 0 6695800 3237 176 1184 1220 5095 5095 ASQDPFPAAIILK 13 1 0 Unmodified _ASQDPFPAAIILK_ 0 0 0 V9HWH0;Q96KB5;E5RFX4 V9HWH0 V9HWH0 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8949 2 685.887552 1369.76055 74396.48 0.71709 0.00049184 -0.15624 -0.00010717 0.56085 0.00038468 685.887324115717 689.894503473609 112.58 0.56273 112.58 112.34 112.9 -7.6294E-06 186 38 6 0 0 0 0.000117 1 72790 74.533 62.486 1 1.6757 1.7335 0 24909000 9945300 14964000 3238 1975 1185 1221 5096 5096 ASQDPFPAAIILK 13 1 0 Unmodified _ASQDPFPAAIILK_ 0 0 0 V9HWH0;Q96KB5;E5RFX4 V9HWH0 V9HWH0 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.8953 2 685.887552 1369.76055 74101.61 0.70482 0.00048343 -0.10711 -7.3466E-05 0.59771 0.00040996 686.389009234134 689.89455916465 124.44 0.52026 124.44 124.18 124.7 0 113 22 6 0 0 0 0.014065 1 73614 37.584 31.861 1 1.2088 0.94968 0 3834000 2031700 1802300 3239 1975 1185 1221 5097 5097 ASQGSTLVHPFR 12 0 1 Unmodified _ASQGSTLVHPFR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.8984 3 433.898321 1298.67313 90746.29 0.1416 6.1439E-05 0.15122 6.5616E-05 0.29282 0.00012706 433.898311006114 437.234494841327 42.178 0.72614 42.178 41.88 42.606 0 237 49 8 0 0 0 0.00016671 2 22333 69.451 54.889 1 1.1071 1.2812 0 165250000 79816000 85433000 3240 790 1186 1222 5098;5099 5099 ASQGSTLVHPFR 12 0 1 Unmodified _ASQGSTLVHPFR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3474 2 650.343843 1298.67313 76156.29 0.93122 0.00060561 -0.16704 -0.00010864 0.76417 0.00049698 650.343935829923 655.347749656861 42.202 0.43449 42.202 42.01 42.444 0 98 31 6 0 0 0 1.833E-05 2 22323 118.23 118.23 1 0.89723 0.99754 0 74837000 45046000 29792000 3241 790 1186 1222 5100;5101 5100 ASQGSTLVHPFR 12 0 1 Unmodified _ASQGSTLVHPFR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.3477 2 650.343843 1298.67313 76976.56 0.93334 0.00060699 -0.059539 -3.8721E-05 0.8738 0.00056827 650.343914330988 655.347855369223 41.107 0.58115 41.107 40.783 41.364 0 143 47 4 0 0 0 0.00023023 2 22032 104.43 95.001 1 1.1149 1.1917 0 24868000 12839000 12029000 3242 790 1186 1222 5102;5103 5102 ASQGSTLVHPFR 12 0 1 Unmodified _ASQGSTLVHPFR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.3427 2 650.343843 1298.67313 75951.67 0.31853 0.00020715 0.17976 0.00011691 0.49829 0.00032406 650.343635688202 655.348253177188 48.511 0.75041 48.511 48.119 48.869 -3.8147E-06 249 63 6 0 0 0 0.05044 1 23039 42.718 38.7 1 1.3634 1.1623 0 4555700 1763800 2791900 3243 790 1186 1222 5104 5104 ASQPDLVDTPTSSK 14 1 0 Unmodified _ASQPDLVDTPTSSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.3669 2 723.359553 1444.70455 71776.01 0.8357 0.00060451 0.024222 1.7521E-05 0.85992 0.00062203 723.359427726046 727.366808349781 42.664 0.80693 42.664 42.305 43.112 0 355 64 8 0 0 0 6.1626E-05 2 22545 91.313 82.206 1 1.6436 1.8203 0 58301000 19620000 38682000 3244 1569 1187 1223 5105;5106 5105 ASQPDLVDTPTSSK 14 1 0 Unmodified _ASQPDLVDTPTSSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.3675 2 723.359553 1444.70455 71308.08 0.69889 0.00050555 -0.46346 -0.00033525 0.23542 0.0001703 723.358048903723 727.366542997216 42.214 0.86169 42.214 41.725 42.587 3.8147E-06 391 75 8 0 0 0 1.52E-14 3 22601 133.05 125.48 1 1.375 1.5459 0 72785000 33117000 39668000 3245 1569 1187 1223 5107;5108;5109 5107 ASQPDLVDTPTSSK 14 1 0 Unmodified _ASQPDLVDTPTSSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.3591 2 723.359553 1444.70455 71993.52 0.56563 0.00040915 0.17513 0.00012668 0.74076 0.00053583 723.359540100484 727.366684613462 49.32 0.75141 49.32 48.921 49.672 0 285 60 7 0 0 0 0.0090413 2 24000 37.681 34.256 1 3.3068 2.6355 0 9696400 2155700 7540700 3246 1569 1187 1223 5110;5111 5111 ASQPDLVDTPTSSK 14 1 0 Unmodified _ASQPDLVDTPTSSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.3661 2 723.359553 1444.70455 71675.91 0.35868 0.00025946 0.3269 0.00023647 0.68558 0.00049592 723.359591771984 727.366819770675 49.692 0.75792 49.692 49.305 50.063 0 310 58 7 0 0 0 0.0088712 1 23561 37.968 37.968 1 3.5309 2.8995 0 9371900 1984600 7387200 3247 1569 1187 1223 5112 5112 ASQPDLVDTPTSSKPQPK 18 2 0 Unmodified _ASQPDLVDTPTSSKPQPK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.5027 2 948.489087 1894.96362 62489.83 0.74357 0.00070526 -0.068755 -6.5213E-05 0.67481 0.00064005 948.489020521248 956.503139112546 36.911 0.4593 36.911 36.699 37.158 0 213 42 7 0 0 0 4.8317E-07 4 18614 91.858 85.374 1 1.8543 2.1886 0 91551000 29896000 61655000 3248 1569 1188 1224 5113;5114;5115;5116 5113 ASQPDLVDTPTSSKPQPK 18 2 0 Unmodified _ASQPDLVDTPTSSKPQPK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.0047 3 632.661817 1894.96362 75547.72 0.70405 0.00044542 0.086636 5.4811E-05 0.79068 0.00050024 632.996229104814 638.004610309234 36.924 0.5898 36.924 36.613 37.203 0 430 54 10 0 0 0 2.1694E-08 1 18657 74.732 57.852 1 1.781 2.1006 0 382640000 133050000 249590000 3249 1569 1188 1224 5117 5117 ASQPDLVDTPTSSKPQPK 18 2 0 Unmodified _ASQPDLVDTPTSSKPQPK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.5043 2 948.489087 1894.96362 63005.16 0.61214 0.00058061 -0.10075 -9.556E-05 0.51139 0.00048505 948.488748571271 956.503254839342 35.91 0.44757 35.91 35.655 36.102 3.8147E-06 205 35 9 0 0 0 8.4092E-05 4 18217 82.651 69.671 1 1.6849 1.9581 0 128960000 48922000 80041000 3250 1569 1188 1224 5118;5119;5120;5121 5118 ASQPDLVDTPTSSKPQPK 18 2 0 Unmodified _ASQPDLVDTPTSSKPQPK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.0052 3 632.661817 1894.96362 74928.38 0.67227 0.00042532 -0.26884 -0.00017008 0.40343 0.00025524 632.661804789382 638.004449897882 35.911 0.69704 35.911 35.612 36.309 0 400 56 11 0 0 0 1.0697E-12 2 18232 87.85 78.435 1 1.8071 2.1111 0 475790000 167180000 308610000 3251 1569 1188 1224 5122;5123 5122 ASQPDLVDTPTSSKPQPK 18 2 0 Unmodified _ASQPDLVDTPTSSKPQPK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.0048 3 632.661817 1894.96362 74882.23 0.46378 0.00029342 -0.3131 -0.00019809 0.15068 9.5328E-05 632.996078994163 638.004501972773 42.394 1.6728 42.394 41.84 43.512 0 720 117 12 0 0 0 3.2112E-05 2 19690 38.578 34.917 1 3.6908 3.117 0 125770000 25792000 99982000 3252 1569 1188 1224 5124;5125 5124 ASQPDLVDTPTSSKPQPK 18 2 0 Unmodified _ASQPDLVDTPTSSKPQPK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.0046 3 632.661817 1894.96362 76189.45 0.26556 0.00016801 -0.16072 -0.00010168 0.10484 6.6331E-05 632.662156541539 638.004584578757 42.534 1.2403 42.534 42.168 43.408 0 566 82 13 0 0 0 8.4535E-06 2 19241 57.616 52.714 1 3.7453 3.2101 0 125300000 27724000 97579000 3253 1569 1188 1224 5126;5127 5126 ASQTLPQATMNHR 13 0 1 Oxidation (M) _ASQTLPQATM(ox)NHR_ ASQTLPQATM(1)NHR ASQTLPQATM(43.3)NHR 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.8481 2 735.859531 1469.70451 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.862 1 19.862 19.362 20.362 0 0 0 0 0.0163 1 6357 43.297 31.703 1 3254 1581 1189 1225 5128 5128 1361 ASREEILAQAK 11 1 1 Unmodified _ASREEILAQAK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.3398 2 608.338227 1214.6619 76953.88 0.70866 0.00043111 0.091766 5.5825E-05 0.80043 0.00048693 608.338178080602 617.349516996248 25.955 0.27198 25.955 25.791 26.063 0 68 17 8 0 0 0 0.00041179 2 11446 107.79 60.185 1 1.7269 2.0331 0 84913000 30798000 54115000 3255 81 1190 1226 5129;5130 5130 ASREEILAQAK 11 1 1 Unmodified _ASREEILAQAK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.3497 2 608.338227 1214.6619 NaN NaN NaN 2.6137 0.00159 NaN NaN NaN NaN 29.836 0.62076 29.836 29.445 30.066 0 0 0 0 0.037756 1 11770 70.1 25.791 1 NaN NaN 0 6513000 0 6513000 3256 81 1190 1226 5131 5131 ASSAAGLTAAVVR 13 0 1 Unmodified _ASSAAGLTAAVVR_ 0 0 0 Q14566;Q4ZG57;B4DRF6 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.3378 2 587.332944 1172.65134 NaN NaN NaN 1.362 0.00079996 NaN NaN NaN NaN 61.288 0.36237 61.288 61.122 61.485 0 0 0 0 7.3128E-05 2 35034 91.937 71.067 1 NaN NaN 0 5030000 0 5030000 3257 1734 1191 1227 5132;5133 5132 ASSAAGLTAAVVR 13 0 1 Unmodified _ASSAAGLTAAVVR_ 0 0 0 Q14566;Q4ZG57;B4DRF6 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.3379 2 587.332944 1172.65134 80656.06 0.58438 0.00034323 0.77369 0.00045441 1.3581 0.00079764 587.33315674035 592.337451170209 59.982 0.28992 59.982 59.816 60.106 -3.8147E-06 85 22 6 0 0 0 9.1829E-05 1 34908 93.258 93.258 1 2.0952 2.055 0 13972000 4113700 9858300 3258 1734 1191 1227 5134 5134 ASSAQSGGSSGGPAVPTVQR 20 0 1 Acetyl (Protein N-term) _(ac)ASSAQSGGSSGGPAVPTVQR_ 1 0 0 A0A140VK49;Q7KZF4;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 927.459 2 921.95066 1841.88677 NaN NaN NaN -0.10808 -9.9645E-05 NaN NaN NaN NaN 59.308 0.26108 59.308 59.185 59.446 0 0 0 0 1.2276E-05 1 34474 67.102 58.797 1 NaN NaN 0 6497100 0 6497100 3259 618 1192 1228 5135 5135 ASSAQSGGSSGGPAVPTVQR 20 0 1 Acetyl (Protein N-term) _(ac)ASSAQSGGSSGGPAVPTVQR_ 1 0 0 A0A140VK49;Q7KZF4;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.951 2 921.95066 1841.88677 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.389 1 59.389 58.889 59.889 0 0 0 0 0.0016567 1 34562 45.873 29.241 1 3260 618 1192 1228 5136 5136 ASSASAPSSTPTGTTVVK 18 1 0 Unmodified _ASSASAPSSTPTGTTVVK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.9306 2 824.923049 1647.83154 70092.8 0.77686 0.00064085 0.35209 0.00029045 1.129 0.0009313 825.425175970692 828.930359682326 36.242 0.32376 36.242 36.096 36.419 0 109 29 5 0 0 0 2.4181E-05 2 18348 70.089 70.089 1 0.83501 0.85793 0 14484000 8178500 6305900 3261 135 1193 1229 5137;5138 5138 ASSASAPSSTPTGTTVVK 18 1 0 Unmodified _ASSASAPSSTPTGTTVVK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.9224 2 824.923049 1647.83154 NaN NaN NaN 0.35412 0.00029213 NaN NaN NaN NaN 35.423 0.31596 35.423 35.265 35.581 0 0 0 0 0.0023559 1 18009 51.726 45.493 1 NaN NaN 0 6536900 6536900 0 3262 135 1193 1229 5139 5139 ASSASAPSSTPTGTTVVK 18 1 0 Unmodified _ASSASAPSSTPTGTTVVK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.9327 2 824.923049 1647.83154 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.42 1 35.42 34.92 35.92 0 0 0 0 1.4867E-14 1 18065 109 83.56 1 3263 135 1193 1229 5140 5140 ASSEGGTAAGAGLDSLHK 18 1 0 Unmodified _ASSEGGTAAGAGLDSLHK_ 0 0 0 A4D275;O15143 A4D275 A4D275 ARPC1B Actin-related protein 2/3 complex subunit 1B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.9061 2 814.897365 1627.78018 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.925 1 34.925 34.425 35.425 0 0 0 0 0.00022284 1 17515 64.104 47.433 1 3264 670 1194 1230 5141 5141 ASSEGGTAAGAGLDSLHK 18 1 0 Unmodified _ASSEGGTAAGAGLDSLHK_ 0 0 0 A4D275;O15143 A4D275 A4D275 ARPC1B Actin-related protein 2/3 complex subunit 1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.4066 2 814.897365 1627.78018 NaN NaN NaN 0.86775 0.00070713 NaN NaN NaN NaN 34.095 0.31903 34.095 33.937 34.256 0 0 0 0 9.0799E-06 1 17148 68.277 55.322 1 NaN NaN 0 8788600 0 8788600 3265 670 1194 1230 5142 5142 ASSEGTIPQVQR 12 0 1 Unmodified _ASSEGTIPQVQR_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.8348 2 636.830766 1271.64698 NaN NaN NaN -0.11497 -7.3218E-05 NaN NaN NaN NaN 36.697 0.54895 36.697 36.332 36.881 0 0 0 0 0.0015142 1 18405 77.192 64.565 1 NaN NaN 0 33817000 0 33817000 3266 2008 1195 1231 5143 5143 ASSEGTIPQVQR 12 0 1 Unmodified _ASSEGTIPQVQR_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.8364 2 636.830766 1271.64698 NaN NaN NaN -0.27974 -0.00017815 NaN NaN NaN NaN 35.9 0.55036 35.9 35.581 36.131 0 0 0 0 0.0012705 1 18193 79.974 67.147 1 NaN NaN 0 43235000 0 43235000 3267 2008 1195 1231 5144 5144 ASSEGTIPQVQR 12 0 1 Unmodified _ASSEGTIPQVQR_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.8347 2 636.830766 1271.64698 NaN NaN NaN 0.073705 4.6938E-05 NaN NaN NaN NaN 42.032 0.62682 42.032 41.719 42.346 0 0 0 0 0.054459 1 19473 41.283 36.5 1 NaN NaN 0 8068100 0 8068100 3268 2008 1195 1231 5145 5145 ASSEGTIPQVQREEPAPEEEEPLLLQRPER 30 0 3 Unmodified _ASSEGTIPQVQREEPAPEEEEPLLLQRPER_ 0 0 2 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.4346 4 854.433849 3413.70629 64913.2 0.41727 0.00035653 -0.36917 -0.00031543 0.048103 4.1101E-05 854.934781814797 862.441001392787 96.498 0.68233 96.498 96.159 96.841 0 341 37 12 0 0 0 0.00039652 2 53290 30.104 30.104 1 1.4948 1.7963 0 24871000 10703000 14168000 3269 2008 1196 1232 5146;5147 5147 ASSGLLYPLER 11 0 1 Unmodified _ASSGLLYPLER_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.3309 2 603.32987 1204.64519 78038.59 0.79997 0.00048265 0.13502 8.1459E-05 0.93499 0.00056411 603.329780295819 608.334010947531 86.821 1.0925 86.821 86.6 87.693 0 470 92 10 0 0 0 5.0836E-08 3 52235 117.31 103.59 1 0.68424 0.81117 0 550200000 325200000 225000000 3270 167 1197 1233 5148;5149;5150 5148 ASSGLLYPLER 11 0 1 Unmodified _ASSGLLYPLER_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.3301 2 603.32987 1204.64519 77402.72 0.77018 0.00046467 0.0038335 2.3128E-06 0.77401 0.00046698 603.329754517331 608.333928469044 85.69 1.0714 85.69 85.512 86.583 7.6294E-06 527 87 11 0 0 0 2.3743E-10 3 52913 134.25 112.16 1 0.72433 0.84974 0 794480000 461140000 333340000 3271 167 1197 1233 5151;5152;5153 5152 ASSGLLYPLER 11 0 1 Unmodified _ASSGLLYPLER_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.3353 2 603.32987 1204.64519 77194.25 0.58476 0.00035281 0.22512 0.00013582 0.80989 0.00048863 603.329886095243 608.334052944689 99.284 0.80283 99.284 99.01 99.813 0 310 46 10 0 0 0 8.5874E-11 2 56014 136.63 120.97 1 0.90454 0.78293 0 133960000 68239000 65725000 3272 167 1197 1233 5154;5155 5155 ASSGLLYPLER 11 0 1 Unmodified _ASSGLLYPLER_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.3344 2 603.32987 1204.64519 77522.98 0.55628 0.00033562 0.2123 0.00012809 0.76858 0.00046371 603.3298211853 608.334059921378 99.062 0.75514 99.062 98.856 99.611 -7.6294E-06 327 48 10 0 0 0 5.0291E-06 2 55080 110.76 99.266 1 0.90403 0.78934 0 134050000 66096000 67954000 3273 167 1197 1233 5156;5157 5157 ASSLISLLK 9 1 0 Unmodified _ASSLISLLK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.3021 2 466.294768 930.574983 89166.84 0.59878 0.00027921 0.12582 5.8668E-05 0.72459 0.00033787 466.294554874292 470.301918934669 100.95 0.86295 100.95 100.57 101.43 0 207 63 5 0 0 0 0.0090673 2 61782 67.993 29.859 1 2.1287 2.297 0 34533000 10598000 23936000 3274 1054 1198 1234 5158;5159 5158 ASSLISLLK 9 1 0 Unmodified _ASSLISLLK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2948 2 466.294768 930.574983 90050.09 0.34287 0.00015988 0.054496 2.5411E-05 0.39737 0.00018529 466.294554079209 470.301931038289 100.01 0.87087 100.01 99.597 100.47 -7.6294E-06 219 69 4 0 0 0 0.0054512 2 62658 66.692 36.507 1 2.1197 2.2676 0 21154000 6639200 14514000 3275 1054 1198 1234 5160;5161 5161 ASSQVNVEGQSR 12 0 1 Unmodified _ASSQVNVEGQSR_ 0 0 0 O43665 O43665 O43665 RGS10 Regulator of G-protein signaling 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3109 2 631.310197 1260.60584 NaN NaN NaN 0.21176 0.00013369 NaN NaN NaN NaN 22.6 0.35501 22.6 22.436 22.791 0 0 0 0 0.0029448 1 8577 66.692 46.363 1 NaN NaN 0 4757600 4757600 0 3276 1387 1199 1235 5162 5162 ASSSDSEDSSEEEEEVQGPPAK 22 1 0 Unmodified _ASSSDSEDSSEEEEEVQGPPAK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;S4R3C2 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1151.4827 2 1147.47495 2292.93535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.72 1 30.72 30.22 31.22 0 0 0 0 0.00025445 1 15102 56.599 49.397 1 3277 468 1200 1236 5163 5163 ASSSLGLQDFDLLR 14 0 1 Unmodified _ASSSLGLQDFDLLR_ 0 0 0 B5BUK7;B2RCZ4;P41743 B5BUK7 B5BUK7 PRKCI Protein kinase C;Protein kinase C iota type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.4066 2 761.399012 1520.78347 70491.59 0.61902 0.00047132 0.48004 0.0003655 1.0991 0.00083682 761.398802593571 766.403378094212 117.86 0.46517 117.86 117.65 118.12 -7.6294E-06 125 27 7 0 0 0 0.0093591 2 75426 37.144 28.415 1 1.5258 1.6039 0 11268000 5406400 5861500 3278 884 1201 1237 5164;5165 5164 ASSSLGLQDFDLLR 14 0 1 Unmodified _ASSSLGLQDFDLLR_ 0 0 0 B5BUK7;B2RCZ4;P41743 B5BUK7 B5BUK7 PRKCI Protein kinase C;Protein kinase C iota type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.403 2 761.399012 1520.78347 69858.41 0.55566 0.00042308 0.51098 0.00038906 1.0666 0.00081214 761.39857098962 766.403740024795 117.37 0.46716 117.37 117.11 117.58 0 126 27 8 0 0 0 1.5139E-14 3 76939 133.07 90.352 1 1.5559 1.5393 0 12414000 4149000 8265400 3279 884 1201 1237 5166;5167;5168 5166 ASTAASSALGFSK 13 1 0 Unmodified _ASTAASSALGFSK_ 0 0 0 O96028;Q05CW4;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.3096 2 599.309135 1196.60372 78940.42 0.71611 0.00042917 0.045456 2.7242E-05 0.76156 0.00045641 599.30890618471 603.316150225021 49.204 0.54088 49.204 48.904 49.445 0 166 40 7 0 0 0 2.0943E-13 2 26860 129 120.31 1 0.84365 0.95346 0 83401000 44236000 39165000 3280 1435 1202 1238 5169;5170 5169 ASTAASSALGFSK 13 1 0 Unmodified _ASTAASSALGFSK_ 0 0 0 O96028;Q05CW4;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.317 2 599.309135 1196.60372 78578.16 0.55751 0.00033412 0.47497 0.00028466 1.0325 0.00061877 599.308860161036 603.316768208236 47.927 0.76044 47.927 47.73 48.491 -3.8147E-06 190 52 8 0 0 0 8.5218E-14 2 26703 134.3 134.3 1 1.3808 1.5569 0 61815000 28866000 32949000 3281 1435 1202 1238 5171;5172 5171 ASTAASSALGFSK 13 1 0 Unmodified _ASTAASSALGFSK_ 0 0 0 O96028;Q05CW4;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.3165 2 599.309135 1196.60372 78672.51 0.57692 0.00034575 0.46931 0.00028126 1.0462 0.00062701 599.309328923122 603.316344101376 56.486 0.57933 56.486 56.171 56.75 0 132 35 7 0 0 0 0.00016025 2 28417 87.001 82.388 1 1.5696 1.2542 0 9054800 3755900 5298900 3282 1435 1202 1238 5173;5174 5173 ASTEGVAIQGQQGTR 15 0 1 Unmodified _ASTEGVAIQGQQGTR_ 0 0 0 Q92621 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.8861 2 751.881518 1501.74848 73008.72 0.8618 0.00064797 -0.062223 -4.6784E-05 0.79958 0.00060119 752.383177258837 756.885466580342 28.191 0.30884 28.191 28.035 28.344 0 63 22 4 0 0 0 2.5107E-09 2 13194 112.64 112.64 1 1.3441 1.4082 0 12478000 4788400 7690100 3283 1950 1203 1239 5175;5176 5175 ASTEGVAIQGQQGTR 15 0 1 Unmodified _ASTEGVAIQGQQGTR_ 0 0 0 Q92621 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.8861 2 751.881518 1501.74848 71775.52 0.23918 0.00017984 -0.87414 -0.00065725 -0.63496 -0.00047741 751.881327193073 756.885672409257 27.622 0.347 27.622 27.359 27.706 0 63 17 6 0 0 0 4.5246E-07 1 12866 103.44 85.575 1 1.2613 1.3315 0 23435000 9389600 14046000 3284 1950 1203 1239 5177 5177 ASTEGVAIQGQQGTR 15 0 1 Unmodified _ASTEGVAIQGQQGTR_ 0 0 0 Q92621 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.8821 2 751.881518 1501.74848 71596.8 0.50505 0.00037974 -0.91088 -0.00068487 -0.40583 -0.00030514 751.881674348083 756.885345840836 32.309 0.43164 32.309 32.146 32.578 0 54 22 4 0 0 0 0.026311 1 13407 28.806 24.652 1 0.98363 0.87445 0 1936600 1040100 896470 3285 1950 1203 1239 5178 5178 ASTNAMLISAGLPPLK 16 1 0 Oxidation (M) _ASTNAM(ox)LISAGLPPLK_ ASTNAM(1)LISAGLPPLK ASTNAM(65.4)LISAGLPPLK 0 1 0 O43143 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.4434 2 800.442366 1598.87018 67810.55 0.93039 0.00074472 -0.02633 -2.1076E-05 0.90405 0.00072364 800.44231314761 804.449827676815 101.51 0.82138 101.51 101.14 101.97 0 372 63 8 0 0 0 7.3769E-05 1 62238 65.395 65.395 1 1.5432 1.668 0 35387000 13495000 21892000 3286 1379 1204 1240 5179 5179 1043 ASTNAMLISAGLPPLK 16 1 0 Oxidation (M) _ASTNAM(ox)LISAGLPPLK_ ASTNAM(1)LISAGLPPLK ASTNAM(86.29)LISAGLPPLK 0 1 0 O43143 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.4488 2 800.442366 1598.87018 68489.16 0.65009 0.00052036 -0.084726 -6.7819E-05 0.56537 0.00045254 800.943653478574 804.449842302254 100.84 0.85296 100.84 100.42 101.28 -7.6294E-06 397 67 8 0 0 0 8.6099E-06 2 63156 86.288 86.288 1 1.5545 1.683 0 38759000 15689000 23070000 3287 1379 1204 1240 5180;5181 5180 1043 ASTNAMLISAGLPPLK 16 1 0 Oxidation (M) _ASTNAM(ox)LISAGLPPLK_ ASTNAM(1)LISAGLPPLK ASTNAM(71.81)LISAGLPPLK 0 1 0 O43143 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 804.4499 2 800.442366 1598.87018 67769.19 0.64745 0.00051824 -0.22143 -0.00017724 0.42602 0.000341 800.442472633186 804.449688460945 113.85 0.67645 113.85 113.5 114.17 0 169 31 7 0 0 0 7.5144E-05 1 65439 71.806 70.574 1 0.83348 0.67981 0 5861200 2850000 3011200 3288 1379 1204 1240 5182 5182 1043 ASVILAGLGFTPK 13 1 0 Unmodified _ASVILAGLGFTPK_ 0 0 0 B4DRU9;A0A0S2Z5L1;Q9NUQ8 B4DRU9 B4DRU9 ABCF3 ATP-binding cassette sub-family F member 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.3864 2 637.379363 1272.74417 NaN NaN NaN 0.22854 0.00014567 NaN NaN NaN NaN 112 0.43747 112 111.82 112.25 7.6294E-06 0 0 0 0.00024023 1 70587 88.596 29.615 1 NaN NaN 0 5383100 0 5383100 3289 583 1205 1241 5183 5183 ASVITQVFHVPLEER 15 0 1 Unmodified _ASVITQVFHVPLEER_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;C9J5E5;C9JIZ1;C9JZI8;C9JHS7;C9JHZ8;C9JES8;C9JT62;C9JK79 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.6503 3 575.649183 1723.92572 80722.3 0.77752 0.00044758 0.047766 2.7497E-05 0.82528 0.00047507 575.648919541593 578.985157378402 106.82 0.68192 106.82 106.48 107.16 -7.6294E-06 245 50 8 0 0 0 4.4899E-06 2 68057 89.541 77.049 1 1.797 1.8231 0 20287000 7971100 12316000 3290 154 1206 1242 5184;5185 5185 ASVITQVFHVPLEER 15 0 1 Unmodified _ASVITQVFHVPLEER_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;C9J5E5;C9JIZ1;C9JZI8;C9JHS7;C9JHZ8;C9JES8;C9JT62;C9JK79 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.6487 3 575.649183 1723.92572 80395.56 0.72294 0.00041616 0.45084 0.00025953 1.1738 0.00067569 575.983850625819 578.98553511037 118.21 0.3083 118.21 118.05 118.36 0 51 11 6 0 0 0 0.00022607 2 69770 51.147 38.52 1 1.3494 1.1389 0 3015100 1147800 1867400 3291 154 1206 1242 5186;5187 5187 ASVITQVFHVPLEER 15 0 1 Unmodified _ASVITQVFHVPLEER_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;C9J5E5;C9JIZ1;C9JZI8;C9JHS7;C9JHZ8;C9JES8;C9JT62;C9JK79 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.6493 3 575.649183 1723.92572 80906.36 0.38986 0.00022442 0.30066 0.00017307 0.69052 0.0003975 575.649138023481 578.985447366883 117.9 0.27729 117.9 117.76 118.04 0 56 12 6 0 0 0 0.010847 2 68631 25.365 19.585 1 1.2323 1.0446 0 3065100 1516600 1548500 3292 154 1206 1242 5188;5189 5189 ASVPSVQIQGQR 12 0 1 Unmodified _ASVPSVQIQGQR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3534 2 635.349126 1268.6837 77438.62 0.55211 0.00035078 -0.62587 -0.00039765 -0.073766 -4.6867E-05 635.34815366302 640.353166328593 48.815 0.68438 48.815 48.505 49.19 0 145 55 3 0 0 0 0.00074526 2 27248 66.435 66.435 1 1.4988 1.4899 0 16244000 6155300 10088000 3293 229 1207 1243 5190;5191 5190 ASVPSVQIQGQR 12 0 1 Unmodified _ASVPSVQIQGQR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3543 2 635.349126 1268.6837 79815.65 0.61591 0.00039132 0.099584 6.327E-05 0.71549 0.00045459 635.349138435419 640.353337183449 57.771 0.62857 57.771 57.432 58.061 3.8147E-06 152 45 5 0 0 0 0.041943 1 29183 33.961 33.961 1 5.4106 4.532 0 3175100 571330 2603700 3294 229 1207 1243 5192 5192 ASVQGVPLESSNNDIFLPVK 20 1 0 Unmodified _ASVQGVPLESSNNDIFLPVK_ 0 0 0 Q6P0N0;G5E9K5 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1061.6387 2 1057.56004 2113.10553 61047.83 0.844 0.00089258 0.31884 0.00033719 1.1628 0.0012298 1058.06189193019 1061.56696700874 114.03 0.35353 114.03 113.87 114.23 -7.6294E-06 106 26 6 0 0 0 0.052964 1 72263 40.066 40.066 1 0.71606 0.74343 0 11382000 5597400 5784200 3295 1849 1208 1244 5193 5193 ASVQGVPLESSNNDIFLPVK 20 1 0 Unmodified _ASVQGVPLESSNNDIFLPVK_ 0 0 0 Q6P0N0;G5E9K5 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1062.0697 2 1057.56004 2113.10553 61008.73 0.42204 0.00044634 0.34867 0.00036874 0.77071 0.00081508 1058.06111468747 1062.06884812073 113.53 0.33914 113.53 113.37 113.71 7.6294E-06 110 22 6 0 0 0 0.00018316 1 73666 38.799 38.799 1 0.64959 0.66211 0 12206000 7554300 4651200 3296 1849 1208 1244 5194 5194 ASVQGVPLESSNNDIFLPVK 20 1 0 Unmodified _ASVQGVPLESSNNDIFLPVK_ 0 0 0 Q6P0N0;G5E9K5 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1062.0697 2 1057.56004 2113.10553 59768.7 0.37079 0.00039213 0.55379 0.00058567 0.92458 0.0009778 1058.06177904508 1061.56744439203 125.39 0.50127 125.39 125.14 125.64 0 118 17 11 0 0 0 6.6775E-06 2 75193 53.001 53.001 1 1.3304 1.0478 0 10970000 4849000 6121100 3297 1849 1208 1244 5195;5196 5195 ASVQGVPLESSNNDIFLPVK 20 1 0 Unmodified _ASVQGVPLESSNNDIFLPVK_ 0 0 0 Q6P0N0;G5E9K5 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1061.5687 2 1057.56004 2113.10553 59741.67 0.34396 0.00036376 0.28252 0.00029878 0.62648 0.00066254 1058.06150432649 1062.06865683532 125.22 0.50864 125.22 125.01 125.52 0 139 20 10 0 0 0 0.0069472 2 74176 25.53 25.53 1 1.5148 1.2436 0 12355000 4752200 7602700 3298 1849 1208 1244 5197;5198 5197 ASVSITFDNSDK 12 1 0 Unmodified _ASVSITFDNSDK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.3178 2 642.309332 1282.60411 76049.08 0.68256 0.00043842 0.13446 8.6364E-05 0.81702 0.00052478 642.309388800456 646.316478557705 61.01 0.62271 61.01 60.69 61.312 3.8147E-06 270 44 8 0 0 0 0.000191 2 34687 77.379 67.57 1 0.81057 0.93117 0 200990000 110320000 90669000 3299 69 1209 1245 5199;5200 5200 ASVSITFDNSDK 12 1 0 Unmodified _ASVSITFDNSDK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3095 2 642.309332 1282.60411 75627.69 0.63715 0.00040925 0.034919 2.2429E-05 0.67207 0.00043167 642.309405098345 646.316324970567 59.844 0.86818 59.844 59.446 60.314 0 355 67 9 0 0 0 7.0704E-06 2 34742 109.42 102.04 1 0.8126 0.94783 0 262270000 142050000 120230000 3300 69 1209 1245 5201;5202 5201 ASVSITFDNSDK 12 1 0 Unmodified _ASVSITFDNSDK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.3096 2 642.309332 1282.60411 76106.89 0.33289 0.00021382 0.16164 0.00010382 0.49453 0.00031764 642.309424931897 646.31651201607 70.442 0.53655 70.442 70.152 70.689 0 193 35 8 0 0 0 0.00012005 2 36925 94.616 73.153 1 1.7573 1.442 0 37247000 13873000 23374000 3301 69 1209 1245 5203;5204 5204 ASVSITFDNSDK 12 1 0 Unmodified _ASVSITFDNSDK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.3165 2 642.309332 1282.60411 76213.2 0.1951 0.00012532 0.29078 0.00018677 0.48589 0.00031209 642.309517943224 646.316587621667 70.954 0.52623 70.954 70.653 71.179 0 251 40 8 0 0 0 0.00026837 2 36450 73.499 67.719 1 1.7023 1.4212 0 42578000 15659000 26919000 3302 69 1209 1245 5205;5206 5206 ASVSITFDNSDKK 13 2 0 Unmodified _ASVSITFDNSDKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3578 2 706.356813 1410.69907 73134.35 0.84984 0.00060029 -0.13374 -9.4471E-05 0.7161 0.00050582 706.356736481278 714.370739250546 43.603 0.74123 43.603 43.179 43.92 0 278 64 6 0 0 0 6.9187E-05 2 23151 97.456 97.456 1 0.88575 1.0458 0 41360000 21327000 20033000 3303 69 1210 1246 5207;5208 5207 ASVSITFDNSDKK 13 2 0 Unmodified _ASVSITFDNSDKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.3718 2 706.356813 1410.69907 71701.85 0.71979 0.00050843 -0.23509 -0.00016605 0.48471 0.00034238 706.356405422669 714.370796894293 42.94 0.60513 42.94 42.548 43.153 0 273 49 7 0 0 0 2.4928E-09 1 23140 123.79 123.79 1 0.84111 0.97522 0 71152000 36924000 34229000 3304 69 1210 1246 5209 5209 ASVSITFDNSDKK 13 2 0 Unmodified _ASVSITFDNSDKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.3681 2 706.356813 1410.69907 71915.89 0.31259 0.0002208 -0.02168 -1.5314E-05 0.29091 0.00020549 706.356874133427 714.370910474896 50.619 0.87157 50.619 50.242 51.113 -3.8147E-06 460 63 10 0 0 0 0.021643 2 24114 38.875 28.643 1 1.8119 1.538 0 24008000 8794000 15214000 3305 69 1210 1246 5210;5211 5210 ASVVTLPVYLNFTR 14 0 1 Unmodified _ASVVTLPVYLNFTR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.4507 2 790.445766 1578.87698 NaN NaN NaN 0.62721 0.00049578 NaN NaN NaN NaN 122.92 0.47971 122.92 122.68 123.16 0 0 0 0 0.00029175 1 79571 81.525 61.221 1 NaN NaN 0 10948000 0 10948000 3306 1729 1211 1247 5212 5212 ASWSSLSMDEK 11 1 0 Oxidation (M) _ASWSSLSM(ox)DEK_ ASWSSLSM(1)DEK ASWSSLSM(57.79)DEK 0 1 0 P13073;Q86WV2;H3BPG0;H3BN72;H3BNV9 P13073 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.7772 2 628.77681 1255.53907 77968.41 0.52649 0.00033104 0.065691 4.1305E-05 0.59218 0.00037235 628.776841339412 632.784070864741 45.91 0.58388 45.91 45.606 46.19 0 170 49 4 0 0 0 0.0022123 2 25243 57.785 55.067 1 1.2505 1.2483 0 14312000 6845400 7467000 3307 1477 1212 1248 5213;5214 5214 1224 ASYAEQLSMLK 11 1 0 Oxidation (M) _ASYAEQLSM(ox)LK_ ASYAEQLSM(1)LK ASYAEQLSM(70.06)LK 0 1 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.8207 2 628.813196 1255.61184 76380.92 0.35298 0.00022196 0.92957 0.00058453 1.2826 0.00080649 629.315804544597 632.820281163005 68.509 0.32548 68.509 68.306 68.631 7.6294E-06 83 29 4 0 0 0 0.0005352 1 39731 70.056 70.056 1 1.0576 1.1014 0 11617000 5824000 5793100 3308 186;1747 1213 1249 5215 5215 150 ASYDDPYKK 9 2 0 Unmodified _ASYDDPYKK_ 0 0 1 A0A0S2Z4Z0;Q96PK6;Q59GV2;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.772 2 543.758746 1085.50294 82249.52 0.43896 0.00023869 -0.20255 -0.00011014 0.2364 0.00012855 543.758705667257 551.772742514043 19.093 0.26713 19.093 18.994 19.262 0 71 18 5 0 0 0 0.0034495 2 5832 77.318 70.088 1 1.462 1.724 0 14770000 5840200 8929600 3309 571 1214 1250 5216;5217 5216 ASYDDPYKK 9 2 0 Unmodified _ASYDDPYKK_ 0 0 1 A0A0S2Z4Z0;Q96PK6;Q59GV2;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.773 2 543.758746 1085.50294 81885.4 0.063009 3.4262E-05 0.36379 0.00019782 0.4268 0.00023208 543.758681887781 551.773227612754 20.419 0.26952 20.419 20.27 20.54 0 22 7 5 0 0 0 0.040841 1 5841 48.283 48.283 1 0.86882 0.77683 0 1854900 1036400 818470 3310 571 1214 1250 5218 5218 ASYVAPLTAQPATYR 15 0 1 Unmodified _ASYVAPLTAQPATYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.9233 2 804.922655 1607.83076 68270.01 0.62052 0.00049947 -0.09337 -7.5156E-05 0.52715 0.00042432 804.922678074827 809.926753966583 76.828 0.56326 76.828 76.541 77.105 0 282 48 8 0 0 0 1.4771E-05 1 45314 89.403 89.403 1 1.3881 1.4994 0 48608000 19129000 29479000 3311 571 1215 1251 5219 5219 ASYVAPLTAQPATYR 15 0 1 Unmodified _ASYVAPLTAQPATYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.9238 2 804.922655 1607.83076 68221 0.47302 0.00038074 0.21808 0.00017554 0.6911 0.00055628 804.92289352623 809.926865651957 75.894 0.48438 75.894 75.613 76.098 0 260 44 8 0 0 0 2.3703E-07 2 45741 107.85 107.85 1 1.2638 1.4489 0 82438000 41855000 40583000 3312 571 1215 1251 5220;5221 5220 ASYVAPLTAQPATYR 15 0 1 Unmodified _ASYVAPLTAQPATYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.923 2 804.922655 1607.83076 67701.48 0.61379 0.00049405 -0.20065 -0.0001615 0.41314 0.00033255 804.922498577204 809.926719457955 87.993 0.60336 87.993 87.668 88.271 0 211 37 8 0 0 0 5.9351E-07 2 48513 100.55 100.55 1 0.91377 0.74496 0 15111000 8017100 7093800 3313 571 1215 1251 5222;5223 5223 ASYVAPLTAQPATYR 15 0 1 Unmodified _ASYVAPLTAQPATYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 804.9223 2 804.922655 1607.83076 68423.35 0.51014 0.00041063 -0.18892 -0.00015207 0.32122 0.00025856 804.9225878032 809.92665501768 87.991 0.58942 87.991 87.699 88.289 0 214 34 8 0 0 0 8.8677E-05 2 47578 83.137 83.137 1 0.98375 0.8052 0 13314000 6480500 6833800 3314 571 1215 1251 5224;5225 5224 ATAAPAGAPPQPQDLEFTK 19 1 0 Unmodified _ATAAPAGAPPQPQDLEFTK_ 0 0 0 H3BSJ9;H3BRG4;P22695;H3BUE4;H3BUI9 H3BSJ9 H3BSJ9 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.4875 2 955.486347 1908.95814 65419.88 0.68266 0.00065228 0.014553 1.3905E-05 0.69722 0.00066618 955.987317966718 959.49381852245 80.534 0.43076 80.534 80.342 80.772 0 118 37 4 0 0 0 7.2516E-06 2 47931 77.185 77.185 1 1.9226 1.9142 0 9634700 3292000 6342700 3315 1305 1216 1252 5226;5227 5227 ATAAPAGAPPQPQDLEFTK 19 1 0 Unmodified _ATAAPAGAPPQPQDLEFTK_ 0 0 0 H3BSJ9;H3BRG4;P22695;H3BUE4;H3BUI9 H3BSJ9 H3BSJ9 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.9941 2 955.486347 1908.95814 NaN NaN NaN -0.1098 -0.00010491 NaN NaN NaN NaN 79.757 0.38981 79.757 79.436 79.826 0 0 0 0 8.679E-05 1 48347 65.179 50.618 1 NaN NaN 0 8080100 0 8080100 3316 1305 1216 1252 5228 5228 ATAAPAGAPPQPQDLEFTK 19 1 0 Unmodified _ATAAPAGAPPQPQDLEFTK_ 0 0 0 H3BSJ9;H3BRG4;P22695;H3BUE4;H3BUI9 H3BSJ9 H3BSJ9 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 955.4847 2 955.486347 1908.95814 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.618 1 79.618 79.118 80.118 0 0 0 0 0.008111 1 48400 44.511 34.459 1 3317 1305 1216 1252 5229 5229 ATAAPAGAPPQPQDLEFTK 19 1 0 Unmodified _ATAAPAGAPPQPQDLEFTK_ 0 0 0 H3BSJ9;H3BRG4;P22695;H3BUE4;H3BUI9 H3BSJ9 H3BSJ9 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 959.9951 2 955.486347 1908.95814 63086.73 0.10072 9.6235E-05 0.38268 0.00036565 0.4834 0.00046188 955.486765434067 959.994855453374 92.361 0.54268 92.361 92.042 92.585 0 122 26 6 0 0 0 0.00055932 1 50601 38.769 38.769 1 1.4705 1.1588 0 3246400 1384800 1861600 3318 1305 1216 1252 5230 5230 ATAEALLALPVLR 13 0 1 Unmodified _ATAEALLALPVLR_ 0 0 0 A6NHV6;Q0IJ49;B4DZM6;Q99640 A6NHV6 A6NHV6 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.4159 2 669.411195 1336.80784 75025.73 0.72578 0.00048585 -0.41973 -0.00028097 0.30605 0.00020487 669.410582814728 674.415615099032 122.55 0.44991 122.55 122.31 122.76 0 139 33 6 0 0 0 1.8952E-13 1 79333 129.85 125.39 1 1.2849 1.2751 0 8340300 3896200 4444100 3319 685 1217 1253 5231 5231 ATAEALLALPVLR 13 0 1 Unmodified _ATAEALLALPVLR_ 0 0 0 A6NHV6;Q0IJ49;B4DZM6;Q99640 A6NHV6 A6NHV6 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.4151 2 669.411195 1336.80784 75714.3 0.8525 0.00057068 -0.80586 -0.00053945 0.046643 3.1223E-05 669.41057855744 674.415155631772 122.02 0.43604 122.02 121.77 122.21 0 149 30 6 0 0 0 1.8952E-13 1 80894 129.85 129.85 1 1.2545 1.2683 0 9768100 4111800 5656300 3320 685 1217 1253 5232 5232 ATAENNFEVELNYGLR 16 0 1 Unmodified _ATAENNFEVELNYGLR_ 0 0 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 925.4515 2 920.447222 1838.87989 62914.39 0.92218 0.00084882 -0.45128 -0.00041538 0.4709 0.00043344 920.948208591716 925.450938908268 114.33 0.61184 114.33 114.1 114.71 0 74 26 6 0 0 0 0.022645 1 66826 27.409 24.281 1 1.8031 1.5078 0 3791100 1294900 2496100 3321 2068 1218 1254 5233 5233 ATAENNFEVELNYGLR 16 0 1 Unmodified _ATAENNFEVELNYGLR_ 0 0 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 925.452 2 920.447222 1838.87989 63236.55 0.5364 0.00049373 0.56461 0.0005197 1.101 0.0010134 920.949385244705 925.953239005266 114.25 0.43202 114.25 114.03 114.46 7.6294E-06 49 17 5 0 0 0 0.002537 1 65789 40.475 36.943 1 1.8766 1.6824 0 2283500 739260 1544200 3322 2068 1218 1254 5234 5234 ATAGDTHLGGEDFDNR 16 0 1 Unmodified _ATAGDTHLGGEDFDNR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.248 3 559.248407 1674.72339 80527.52 0.60144 0.00033636 -0.27909 -0.00015608 0.32235 0.00018027 559.248242165679 562.58432930783 35.056 0.65047 35.056 34.73 35.381 0 399 58 9 0 0 0 4.7598E-05 2 17460 70.783 70.783 1 0.77284 0.89582 0 170730000 94356000 76378000 3323 533;845 1219 1255 5235;5236 5236 ATAGDTHLGGEDFDNR 16 0 1 Unmodified _ATAGDTHLGGEDFDNR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.3683 2 838.368972 1674.72339 65891.31 0.65911 0.00055258 -0.09711 -8.1414E-05 0.562 0.00047116 838.368828388742 843.37296916068 35.046 0.50285 35.046 34.791 35.294 0 179 45 8 0 0 0 1.6044E-24 2 17482 166.7 166.7 1 0.69284 0.77835 0 93925000 43649000 50275000 3324 533;845 1219 1255 5237;5238 5238 ATAGDTHLGGEDFDNR 16 0 1 Unmodified _ATAGDTHLGGEDFDNR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.8707 2 838.368972 1674.72339 65102.53 0.65498 0.00054911 0.17888 0.00014997 0.83386 0.00069908 838.368883577446 843.372993954313 34.142 0.52656 34.142 33.869 34.395 0 189 37 8 0 0 0 2.9245E-12 2 17122 148.62 148.62 1 0.84216 0.97551 0 66770000 36420000 30350000 3325 533;845 1219 1255 5239;5240 5240 ATAGDTHLGGEDFDNR 16 0 1 Unmodified _ATAGDTHLGGEDFDNR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.5844 3 559.248407 1674.72339 80905.54 0.58356 0.00032636 -0.17209 -9.6239E-05 0.41148 0.00023012 559.248314228807 562.584386043247 34.155 0.63877 34.155 33.83 34.469 0 322 46 10 0 0 0 5.136E-06 2 17109 86.378 82.206 1 0.76765 0.87938 0 170470000 90811000 79663000 3326 533;845 1219 1255 5241;5242 5241 ATAGDTHLGGEDFDNR 16 0 1 Unmodified _ATAGDTHLGGEDFDNR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 843.3741 2 838.368972 1674.72339 65888.69 0.33637 0.00028201 0.29747 0.00024939 0.63384 0.00053139 838.369204945345 843.373406169248 40.508 0.51918 40.508 40.229 40.748 0 196 40 6 0 0 0 0.013588 1 18583 43.544 37.311 1 0.98769 0.84701 0 6199400 3169500 3029900 3327 533;845 1219 1255 5243 5243 ATAGDTHLGGEDFDNR 16 0 1 Unmodified _ATAGDTHLGGEDFDNR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.584 3 559.248407 1674.72339 79907.98 0.36459 0.0002039 -0.84562 -0.00047291 -0.48103 -0.00026902 559.247882100045 562.584062598632 40.497 0.66489 40.497 40.174 40.839 -3.8147E-06 348 53 9 0 0 0 2.0436E-05 2 18602 82.259 79.96 1 1.1045 0.92979 0 27647000 12660000 14987000 3328 533;845 1219 1255 5244;5245 5244 ATAGDTHLGGEDFDNR 16 0 1 Unmodified _ATAGDTHLGGEDFDNR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.5841 3 559.248407 1674.72339 80841.05 0.33823 0.00018915 -0.3406 -0.00019048 -0.0023694 -1.3251E-06 559.248243169802 562.584324389133 40.769 0.7102 40.769 40.455 41.165 0 364 56 9 0 0 0 0.008608 2 18162 24.784 24.784 1 1.016 0.87574 0 22327000 11467000 10860000 3329 533;845 1219 1255 5246;5247 5246 ATAGDTHLGGEDFDNR 16 0 1 Unmodified _ATAGDTHLGGEDFDNR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.3697 2 838.368972 1674.72339 66410.95 0.33569 0.00028143 0.14475 0.00012135 0.48044 0.00040278 838.369083425596 843.373183730446 40.761 0.53905 40.761 40.509 41.048 0 255 42 8 0 0 0 0.0019685 1 18274 56.122 56.122 1 1.0811 0.89695 0 5693700 2358000 3335600 3330 533;845 1219 1255 5248 5248 ATALPLLK 8 1 0 Unmodified _ATALPLLK_ 0 0 0 Q9Y2P8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.7805 2 413.773471 825.53239 95496.2 0.23089 9.5535E-05 -0.0059512 -2.4625E-06 0.22494 9.3073E-05 413.773312178654 417.780466913235 79.071 0.98752 79.071 78.541 79.529 0 292 88 6 0 0 0 0.031214 2 46683 51.43 17.617 1 1.0087 1.1321 0 67330000 29951000 37379000 3331 2125 1220 1256 5249;5250 5249 ATALPLLK 8 1 0 Unmodified _ATALPLLK_ 0 0 0 Q9Y2P8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.7733 2 413.773471 825.53239 95243.76 0.3741 0.00015479 -0.10031 -4.1504E-05 0.2738 0.00011329 413.773326290522 417.7804295464 77.614 1.0754 77.614 77.226 78.301 0 391 89 6 0 0 0 0.022274 1 46924 57.281 17.178 1 0.94799 1.0358 0 40380000 18731000 21649000 3332 2125 1220 1256 5251 5251 ATAPVPTVGEGYGYGHESELSQASAAAR 28 0 1 Unmodified _ATAPVPTVGEGYGYGHESELSQASAAAR_ 0 0 0 A8K9U0;Q9BWF3;E9PB51 A8K9U0 A8K9U0 RBM4 RNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.444 3 926.11061 2775.31 63497.72 0.5904 0.00054677 -0.47359 -0.0004386 0.1168 0.00010817 926.444050824093 929.445665249612 76.974 0.6415 76.974 76.567 77.208 0 235 55 7 0 0 0 0.00033064 2 45474 30.702 30.702 1 1.0746 1.0863 0 17835000 10103000 7731900 3333 788 1221 1257 5252;5253 5252 ATAPVPTVGEGYGYGHESELSQASAAAR 28 0 1 Unmodified _ATAPVPTVGEGYGYGHESELSQASAAAR_ 0 0 0 A8K9U0;Q9BWF3;E9PB51 A8K9U0 A8K9U0 RBM4 RNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.1115 3 926.11061 2775.31 63633.77 0.22778 0.00021095 0.052007 4.8164E-05 0.27979 0.00025911 926.444899075134 929.78110630526 75.996 0.40086 75.996 75.805 76.206 -7.6294E-06 230 38 9 0 0 0 1.005E-10 1 45849 55.986 55.986 1 1.2751 1.38 0 27198000 12450000 14748000 3334 788 1221 1257 5254 5254 ATAPVPTVGEGYGYGHESELSQASAAAR 28 0 1 Unmodified _ATAPVPTVGEGYGYGHESELSQASAAAR_ 0 0 0 A8K9U0;Q9BWF3;E9PB51 A8K9U0 A8K9U0 RBM4 RNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 929.7824 3 926.11061 2775.31 63500.32 0.84922 0.00078647 -0.12612 -0.0001168 0.7231 0.00066967 926.445120981488 929.781162060847 88.633 0.54472 88.633 88.406 88.95 7.6294E-06 188 34 9 0 0 0 0.037748 2 48852 12.062 12.062 1 0.89361 0.76148 0 5524400 2556200 2968200 3335 788 1221 1257 5255;5256 5256 ATAPVPTVGEGYGYGHESELSQASAAAR 28 0 1 Unmodified _ATAPVPTVGEGYGYGHESELSQASAAAR_ 0 0 0 A8K9U0;Q9BWF3;E9PB51 A8K9U0 A8K9U0 RBM4 RNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 929.7809 3 926.11061 2775.31 63660.16 0.31565 0.00029232 -0.13893 -0.00012866 0.17672 0.00016366 926.444990728338 929.781045584809 88.519 0.483 88.519 88.265 88.748 0 152 26 10 0 0 0 0.023022 2 47968 16.917 16.917 1 0.94306 0.83411 0 4070500 1817100 2253500 3336 788 1221 1257 5257;5258 5257 ATATHTDVLK 10 1 0 Unmodified _ATATHTDVLK_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 352.8608 3 352.860984 1055.56112 100483.3 -0.17615 -6.2158E-05 0.22801 8.0457E-05 0.051858 1.8299E-05 352.860935880464 355.532389153908 20.259 0.32312 20.259 20.108 20.432 0 35 11 5 0 0 0 0.0087046 1 6723 43.492 16.604 1 1.1546 1.133 0 20496000 9043300 11452000 3337 2038 1222 1258 5259 5259 ATATHTDVLK 10 1 0 Unmodified _ATATHTDVLK_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.788 2 528.787838 1055.56112 84014.6 0.028225 1.4925E-05 0.12671 6.7E-05 0.15493 8.1926E-05 528.787817427057 532.794914670728 20.278 0.45017 20.278 20.108 20.559 0 63 17 8 0 0 0 2.2116E-16 2 6739 183.43 132.73 1 1.1054 1.2024 0 48102000 23351000 24752000 3338 2038 1222 1258 5260;5261 5261 ATATHTDVLK 10 1 0 Unmodified _ATATHTDVLK_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.788 2 528.787838 1055.56112 82559.41 0.12765 6.7498E-05 -0.2028 -0.00010724 -0.075158 -3.9742E-05 528.78766516584 532.794685699039 20.057 0.32645 20.057 19.954 20.28 0 56 11 8 0 0 0 3.1062E-30 2 6390 209.21 146.75 1 1.0989 1.2281 0 95812000 46722000 49090000 3339 2038 1222 1258 5262;5263 5263 ATATHTDVLK 10 1 0 Unmodified _ATATHTDVLK_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.7877 2 528.787838 1055.56112 81646.17 -0.015503 -8.1977E-06 0.51956 0.00027473 0.50405 0.00026654 528.787815244259 532.795182659506 21.511 0.56418 21.511 21.325 21.889 0 77 19 8 0 0 0 0.00027238 2 6530 108.57 71.728 1 1.5982 1.2803 0 8468100 3377200 5090900 3340 2038 1222 1258 5264;5265 5265 ATATHTDVLK 10 1 0 Unmodified _ATATHTDVLK_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 528.7881 2 528.787838 1055.56112 82943.56 -0.0068745 -3.6351E-06 0.31624 0.00016722 0.30937 0.00016359 528.787894245433 532.795018432877 21.32 0.32855 21.32 21.143 21.471 0 75 14 8 0 0 0 0.00034973 1 5948 88.136 56.833 1 1.4384 1.1727 0 7681600 3267400 4414100 3341 2038 1222 1258 5266 5266 ATAVMPDGQFK 11 1 0 Oxidation (M) _ATAVM(ox)PDGQFK_ ATAVM(1)PDGQFK ATAVM(100.02)PDGQFK 0 1 0 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.7944 2 590.786981 1179.55941 NaN NaN NaN -0.33638 -0.00019873 NaN NaN NaN NaN 34.287 0.77348 34.287 33.894 34.667 3.8147E-06 0 0 0 1.3632E-05 1 17067 100.02 90.803 1 NaN NaN 0 41248000 0 41248000 3342 1690 1223 1259 5267 5267 1508 ATAVMPDGQFK 11 1 0 Oxidation (M) _ATAVM(ox)PDGQFK_ ATAVM(1)PDGQFK ATAVM(91.27)PDGQFK 0 1 0 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.7943 2 590.786981 1179.55941 NaN NaN NaN -0.40117 -0.00023701 NaN NaN NaN NaN 33.655 0.5706 33.655 33.344 33.915 0 0 0 0 0.00010692 1 16791 91.265 81.191 1 NaN NaN 0 80042000 0 80042000 3343 1690 1223 1259 5268 5268 1508 ATAVMPDGQFK 11 1 0 Unmodified _ATAVMPDGQFK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.7959 2 582.789524 1163.56449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.858 1 53.858 53.358 54.358 0 0 0 0 0.038023 1 30198 45.368 31.211 1 3344 1690 1223 1260 5269 5269 ATCAPQHGAPGPGPADASK 19 1 0 Unmodified _ATCAPQHGAPGPGPADASK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.2827 3 597.281053 1788.82133 78646.54 0.64058 0.00038261 0.70397 0.00042047 1.3446 0.00080308 597.280887138192 600.288129164264 18.578 0.43378 18.578 18.311 18.745 0 79 17 8 0 0 0 1.65E-12 2 5232 90.22 80.64 1 1.4844 1.4818 0 14316000 5875400 8440400 3345 1504 1224 1261 5270;5271 5271 ATCAPQHGAPGPGPADASK 19 1 0 Unmodified _ATCAPQHGAPGPGPADASK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.4178 2 895.417942 1788.82133 67806.45 0.50784 0.00045473 -0.2967 -0.00026567 0.21115 0.00018907 895.41740361072 899.926618616489 18.565 0.21857 18.565 18.481 18.7 0 40 10 5 0 0 0 2.7903E-05 2 5271 57.414 57.414 1 0.9212 0.92449 0 6921900 3119200 3802600 3346 1504 1224 1261 5272;5273 5273 ATCAPQHGAPGPGPADASK 19 1 0 Unmodified _ATCAPQHGAPGPGPADASK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.9531 3 597.281053 1788.82133 77109.21 0.1256 7.5019E-05 0.72044 0.0004303 0.84604 0.00050532 597.281489006693 600.287352668616 19.944 0.30083 19.944 19.821 20.122 0 62 12 9 0 0 0 1.5733E-12 1 5009 86.546 71.154 1 4.8127 3.7677 0 3361500 539300 2822200 3347 1504 1224 1261 5274 5274 ATCFAYGQTGSGK 13 1 0 Unmodified _ATCFAYGQTGSGK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;Q5JR91 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.3032 2 674.303526 1346.5925 NaN NaN NaN -0.15776 -0.00010638 NaN NaN NaN NaN 32.562 0.68777 32.562 32.167 32.854 0 0 0 0 0.0091884 1 16146 53.569 45.526 1 NaN NaN 0 6404100 6404100 0 3348 626 1225 1262 5275 5275 ATCFAYGQTGSGK 13 1 0 Unmodified _ATCFAYGQTGSGK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;Q5JR91 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.4858 2 674.303526 1346.5925 NaN NaN NaN 0.032638 2.2008E-05 NaN NaN NaN NaN 32.69 0.30157 32.69 32.6 32.902 0 0 0 0 0.0044617 1 16302 61.344 50.179 1 NaN NaN 0 5798700 0 5798700 3349 626 1225 1262 5276 5276 ATCFAYGQTGSGK 13 1 0 Unmodified _ATCFAYGQTGSGK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;Q5JR91 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.311 2 674.303526 1346.5925 73594.4 0.57135 0.00038526 -0.10863 -7.3251E-05 0.46271 0.00031201 674.303326792091 678.310764271972 38.11 0.8289 38.11 37.658 38.487 -3.8147E-06 223 66 5 0 0 0 0.042525 2 17120 30.872 30.872 1 1.2 0.95072 0 4886800 2099700 2787200 3350 626 1225 1262 5277;5278 5277 ATDENPCGIDSECINR 16 0 1 Unmodified _ATDENPCGIDSECINR_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q96DQ7 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.3872 2 925.885814 1849.75708 63679.03 0.81008 0.00075004 -0.049646 -4.5967E-05 0.76044 0.00070408 926.387600785495 930.889902620207 44.648 0.31468 44.648 44.509 44.823 3.8147E-06 65 23 5 0 0 0 0.00015318 3 24384 67.456 63.443 1 0.62496 0.62143 0 7625200 3778900 3846300 3351 898 1226 1263 5279;5280;5281 5280 ATDTLPASIPHVIAR 15 0 1 Unmodified _ATDTLPASIPHVIAR_ 0 0 0 Q9H981 Q9H981 Q9H981 ACTR8 Actin-related protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.6312 3 521.29474 1560.86239 83984.53 0.50113 0.00026124 -0.3044 -0.00015868 0.19673 0.00010256 521.629121161653 524.630597380043 81.938 0.54505 81.938 81.704 82.249 0 160 47 5 0 0 0 0.001323 1 50111 39.629 39.629 1 0.5029 0.55041 0 33294000 15148000 18146000 3352 2044 1227 1264 5282 5282 ATDTSQGELVHPK 13 1 0 Acetyl (Protein N-term) _(ac)ATDTSQGELVHPK_ 1 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.8619 2 712.854438 1423.69432 72197.85 0.66631 0.00047498 -0.046046 -3.2824E-05 0.62027 0.00044216 712.854414647355 716.86144370161 39.955 0.61728 39.955 39.657 40.274 0 338 50 10 0 0 0 1.4256E-38 2 20701 183.03 183.03 1 0.76063 0.8973 0 349490000 209590000 139910000 3353 1817 1228 1265 5283;5284 5284 ATDTSQGELVHPK 13 1 0 Acetyl (Protein N-term) _(ac)ATDTSQGELVHPK_ 1 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.8618 2 712.854438 1423.69432 72696.44 0.5827 0.00041538 -0.095661 -6.8192E-05 0.48704 0.00034719 712.854386519843 716.861468182619 38.96 0.70614 38.96 38.663 39.369 0 385 60 10 0 0 0 6.4277E-89 2 20426 234.29 221.72 1 0.68996 0.81189 0 385140000 226060000 159080000 3354 1817 1228 1265 5285;5286 5286 ATDTSQGELVHPK 13 1 0 Acetyl (Protein N-term) _(ac)ATDTSQGELVHPK_ 1 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 716.8623 2 712.854438 1423.69432 71627.65 0.57629 0.00041081 -0.076625 -5.4623E-05 0.49966 0.00035619 712.854468902565 716.861413109452 45.689 1.1568 45.689 45.307 46.464 0 531 86 10 0 0 0 4.2845E-30 2 21804 169.65 169.65 1 0.76981 0.66483 0 106690000 61406000 45286000 3355 1817 1228 1265 5287;5288 5288 ATDTSQGELVHPK 13 1 0 Acetyl (Protein N-term) _(ac)ATDTSQGELVHPK_ 1 0 0 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 716.8624 2 712.854438 1423.69432 70926.76 0.57212 0.00040784 -0.23756 -0.00016935 0.33456 0.00023849 712.854395148423 716.861352057373 45.854 1.2778 45.854 45.469 46.747 0 590 80 11 0 0 0 1.0511E-48 2 21360 193.28 193.28 1 0.78802 0.66981 0 76414000 40890000 35524000 3356 1817 1228 1265 5289;5290 5290 ATEALCWAEGQR 12 0 1 Unmodified _ATEALCWAEGQR_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9;J3KSI1 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.3268 2 696.322251 1390.62995 74140.24 0.57486 0.00040029 0.12929 9.0025E-05 0.70414 0.00049031 696.322302887495 701.326735067008 64.272 0.7014 64.272 63.957 64.659 0 232 61 6 0 0 0 1.8516E-22 2 36923 150.61 133.1 1 0.77464 0.79644 0 19543000 11860000 7683600 3357 1955 1229 1266 5291;5292 5292 ATEALCWAEGQR 12 0 1 Unmodified _ATEALCWAEGQR_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9;J3KSI1 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.3219 2 696.322251 1390.62995 72363.52 0.60596 0.00042194 0.20568 0.00014322 0.81164 0.00056516 696.322468599475 701.326531158767 63.149 0.69112 63.149 62.817 63.508 -3.8147E-06 234 57 6 0 0 0 1.8229E-05 2 36958 104.22 91.41 1 0.84894 0.85136 0 18976000 10564000 8412100 3358 1955 1229 1266 5293;5294 5293 ATEALCWAEGQR 12 0 1 Unmodified _ATEALCWAEGQR_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9;J3KSI1 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.3264 2 696.322251 1390.62995 72531.9 0.61146 0.00042578 0.058043 4.0416E-05 0.66951 0.00046619 696.322566841868 701.326518852181 74.158 0.79374 74.158 73.712 74.505 7.6294E-06 249 53 6 0 0 0 0.00035606 2 39152 72.2 62.449 1 1.3952 1.1792 0 4868700 1955700 2913000 3359 1955 1229 1266 5295;5296 5295 ATEALCWAEGQR 12 0 1 Unmodified _ATEALCWAEGQR_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9;J3KSI1 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 701.3273 2 696.322251 1390.62995 72204.97 0.4481 0.00031203 -0.15446 -0.00010755 0.29365 0.00020447 696.322086153209 701.326529870013 74.621 0.74294 74.621 74.157 74.9 0 211 46 6 0 0 0 0.00090263 1 38655 64.103 56.723 1 1.4246 1.215 0 4549200 2070800 2478400 3360 1955 1229 1266 5297 5297 ATEDGEEDEVSAGEK 15 1 0 Unmodified _ATEDGEEDEVSAGEK_ 0 0 0 A0A024R2G2;Q9BXW9 A0A024R2G2 A0A024R2G2 FANCD2 Fanconi anemia group D2 protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.3337 2 783.326104 1564.63766 NaN NaN NaN 0.19848 0.00015547 NaN NaN NaN NaN 21.117 0.15556 21.117 21.059 21.215 -1.9073E-06 0 0 0 0.0011654 1 7468 66.498 51.354 1 NaN NaN 0 964990 0 964990 3361 111 1230 1267 5298 5298 ATEMVEVGADDDEGGAER 18 0 1 Oxidation (M) _ATEM(ox)VEVGADDDEGGAER_ ATEM(1)VEVGADDDEGGAER ATEM(128.54)VEVGADDDEGGAER 0 1 0 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 934.3897 2 933.886534 1865.75852 65216.31 0.50818 0.00047459 0.2286 0.00021349 0.73679 0.00068807 933.8868863942 938.890734295496 35.036 0.60069 35.036 34.791 35.392 3.8147E-06 138 54 4 0 0 0 1.6796E-22 3 17529 128.54 128.54 1 1.1593 1.187 0 14489000 6549400 7939700 3362 1017 1231 1268 5299;5300;5301 5301 802 ATEMVEVGADDDEGGAER 18 0 1 Oxidation (M) _ATEM(ox)VEVGADDDEGGAER_ ATEM(1)VEVGADDDEGGAER ATEM(136.24)VEVGADDDEGGAER 0 1 0 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 938.8912 2 933.886534 1865.75852 64510.06 0.84657 0.0007906 -0.0038749 -3.6188E-06 0.84269 0.00078698 933.887015997955 938.890454592653 34.248 0.46215 34.248 34.016 34.478 3.8147E-06 94 31 6 0 0 0 3.0353E-23 2 17292 136.24 133.29 1 1.0936 1.0877 0 16312000 8642800 7668800 3363 1017 1231 1268 5302;5303 5303 802 ATEMVEVGADDDEGGAERGEAGDLR 25 0 2 Oxidation (M) _ATEM(ox)VEVGADDDEGGAERGEAGDLR_ ATEM(1)VEVGADDDEGGAERGEAGDLR ATEM(133.68)VEVGADDDEGGAERGEAGDLR 0 1 1 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.7112 3 855.705032 2564.09327 66401.07 0.79293 0.00067852 -0.093019 -7.9597E-05 0.69992 0.00059892 856.039146275231 862.711429345566 47.841 0.32772 47.841 47.739 48.067 0 122 29 6 0 0 0 1.4289E-36 3 25967 133.68 133.68 1 0.98665 1.0694 0 25540000 11984000 13557000 3364 1017 1232 1269 5304;5305;5306 5304 802 ATEMVEVGADDDEGGAERGEAGDLR 25 0 2 Oxidation (M) _ATEM(ox)VEVGADDDEGGAERGEAGDLR_ ATEM(1)VEVGADDDEGGAERGEAGDLR ATEM(57.92)VEVGADDDEGGAERGEAGDLR 0 1 1 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.0405 3 855.705032 2564.09327 66024.88 0.82698 0.00070765 -0.25119 -0.00021494 0.57579 0.0004927 856.039152172887 862.376754212395 46.621 0.68626 46.621 46.23 46.916 -3.8147E-06 249 55 6 0 0 0 8.3143E-10 1 25801 57.922 57.922 1 0.98717 1.1114 0 28894000 14133000 14761000 3365 1017 1232 1269 5307 5307 802 ATENDIANFFSPLNPIR 17 0 1 Unmodified _ATENDIANFFSPLNPIR_ 0 0 0 Q53F48;A0A024QZK8;P31942;A0A024QZP1;B4DHY1 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 965.4933 2 959.986515 1917.95848 61502.4 0.58315 0.00055981 0.0075868 7.2832E-06 0.59073 0.0005671 960.488249535663 965.49216672133 126.34 0.65845 126.34 126.01 126.67 7.6294E-06 330 50 9 0 0 0 7.769E-07 2 82077 93.011 93.011 1 1.9941 2.2096 0 64360000 22338000 42022000 3366 23 1233 1270 5308;5309 5308 ATENDIANFFSPLNPIR 17 0 1 Unmodified _ATENDIANFFSPLNPIR_ 0 0 0 Q53F48;A0A024QZK8;P31942;A0A024QZP1;B4DHY1 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 964.989 2 959.986515 1917.95848 60908.71 0.79072 0.00075908 -0.17435 -0.00016738 0.61637 0.0005917 960.488086057131 965.491839663128 125.92 0.70959 125.92 125.62 126.33 0 274 44 9 0 0 0 4.8221E-09 3 83816 104.17 104.17 1 1.906 2.2167 0 62351000 20725000 41626000 3367 23 1233 1270 5310;5311;5312 5310 ATENDIYNFFSPLNPMR 17 0 1 Oxidation (M) _ATENDIYNFFSPLNPM(ox)R_ ATENDIYNFFSPLNPM(1)R ATENDIYNFFSPLNPM(58.67)R 0 1 0 P55795;B4DFK9;B4DP00 P55795 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1027.9802 2 1022.97529 2043.93603 60359.12 0.60903 0.00062302 -0.12896 -0.00013192 0.48007 0.0004911 1022.97576271279 1027.97984508816 120.59 0.61705 120.59 120.3 120.91 0 239 43 9 0 0 0 5.4816E-05 1 77682 58.674 58.674 1 1.2509 1.2794 0 18990000 8977600 10013000 3368 1617 1234 1271 5313 5313 1404 ATENDIYNFFSPLNPMR 17 0 1 Oxidation (M) _ATENDIYNFFSPLNPM(ox)R_ ATENDIYNFFSPLNPM(1)R ATENDIYNFFSPLNPM(49.63)R 0 1 0 P55795;B4DFK9;B4DP00 P55795 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1023.5143 2 1022.97529 2043.93603 60625.65 0.73963 0.00075662 -0.15458 -0.00015813 0.58505 0.00059849 1022.97617753919 1027.9791511 120.14 0.5773 120.14 119.86 120.44 -7.6294E-06 244 41 9 0 0 0 0.0062927 1 79274 49.627 44.348 1 1.1467 1.2236 0 24657000 9792500 14865000 3369 1617 1234 1271 5314 5314 1404 ATENDIYNFFSPLNPMR 17 0 1 Oxidation (M) _ATENDIYNFFSPLNPM(ox)R_ ATENDIYNFFSPLNPM(1)R ATENDIYNFFSPLNPM(41.4)R 0 1 0 P55795;B4DFK9;B4DP00 P55795 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1023.477 2 1022.97529 2043.93603 60116.5 0.93735 0.00095889 -0.88775 -0.00090815 0.049601 5.074E-05 1022.9750051977 1028.47760930401 132.74 0.5885 132.74 132.49 133.08 0 75 26 6 0 0 0 0.00065837 1 80753 41.401 41.401 1 0.41393 0.34966 0 2996300 2264600 731680 3370 1617 1234 1271 5315 5315 1404 ATENDIYNFFSPLNPVR 17 0 1 Unmodified _ATENDIYNFFSPLNPVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51 A0A024R7T3;E9PCY7 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 998.9921 2 998.991797 1995.96904 60981.17 0.82914 0.0008283 -0.29911 -0.00029881 0.53002 0.00052949 999.492425481001 1003.99582310624 125.29 0.96326 125.29 124.95 125.91 7.6294E-06 463 63 12 0 0 0 1.4537E-09 4 81345 139.46 139.46 1 1.6916 1.9839 0 217300000 81022000 136280000 3371 1231;234 1235 1272 5316;5317;5318;5319 5317 ATENDIYNFFSPLNPVR 17 0 1 Unmodified _ATENDIYNFFSPLNPVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51 A0A024R7T3;E9PCY7 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1003.9965 2 998.991797 1995.96904 61371.51 0.98432 0.00098333 -0.40321 -0.0004028 0.58112 0.00058053 999.492086614329 1004.4971387714 124.94 0.83162 124.94 124.58 125.41 0 458 58 12 0 0 0 9.0325E-13 4 82986 119.69 119.69 1 1.7116 1.9795 0 265500000 97775000 167730000 3372 1231;234 1235 1272 5320;5321;5322;5323 5320 ATENDIYNFFSPLNPVR 17 0 1 Unmodified _ATENDIYNFFSPLNPVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51 A0A024R7T3;E9PCY7 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1003.9968 2 998.991797 1995.96904 59626.21 0.43229 0.00043185 0.52851 0.00052798 0.9608 0.00095983 998.992147430965 1003.99596727684 134.68 0.19334 134.68 134.56 134.75 0 20 4 7 0 0 0 0.0062518 1 82393 34.179 34.179 1 1.2647 1.0885 0 53788000 23684000 30104000 3373 1231;234 1235 1272 5324 5324 ATENDIYNFFSPLNPVR 17 0 1 Unmodified _ATENDIYNFFSPLNPVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51 A0A024R7T3;E9PCY7 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1004.4984 2 998.991797 1995.96904 61225.04 0.45814 0.00045768 0.70612 0.00070541 1.1643 0.0011631 999.494899234548 1004.49720807471 134.64 0.32037 134.64 134.39 134.71 0 32 9 9 0 0 0 0.0016691 1 81464 39.219 39.219 1 1.2749 1.1125 0 63131000 28180000 34951000 3374 1231;234 1235 1272 5325 5325 ATENPEQVASEGLPEPVLR 19 0 1 Unmodified _ATENPEQVASEGLPEPVLR_ 0 0 0 K7EKI4;K7ELF1;K7ELQ0;K7ES61;A0A024R7C5;X6RAY8;Q9BYD3 K7EKI4 K7EKI4 MRPL4 39S ribosomal protein L4, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1023.5236 2 1018.51838 2035.0222 62012.48 0.63484 0.0006466 -0.19528 -0.00019889 0.43957 0.00044771 1019.01926613025 1023.52287743744 98.71 0.49023 98.71 98.478 98.968 7.6294E-06 149 38 6 0 0 0 2.7201E-05 3 60254 57.804 57.804 1 1.0764 1.0984 0 14715000 7051200 7663500 3375 219 1236 1273 5326;5327;5328 5326 ATENPEQVASEGLPEPVLR 19 0 1 Unmodified _ATENPEQVASEGLPEPVLR_ 0 0 0 K7EKI4;K7ELF1;K7ELQ0;K7ES61;A0A024R7C5;X6RAY8;Q9BYD3 K7EKI4 K7EKI4 MRPL4 39S ribosomal protein L4, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1019.0219 2 1018.51838 2035.0222 62180.94 0.43424 0.00044228 -0.097202 -9.9002E-05 0.33704 0.00034328 1019.01954209672 1023.52254713567 98.057 0.45858 98.057 97.813 98.272 0 154 39 6 0 0 0 1.8921E-05 2 61320 62.68 62.68 1 1.0306 1.0173 0 14902000 8029400 6873000 3376 219 1236 1273 5329;5330 5329 ATENPEQVASEGLPEPVLR 19 0 1 Unmodified _ATENPEQVASEGLPEPVLR_ 0 0 0 K7EKI4;K7ELF1;K7ELQ0;K7ES61;A0A024R7C5;X6RAY8;Q9BYD3 K7EKI4 K7EKI4 MRPL4 39S ribosomal protein L4, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1024.0264 2 1018.51838 2035.0222 62085.29 0.60569 0.0006169 -0.013867 -1.4124E-05 0.59182 0.00060278 1018.5182957992 1024.02453910356 111.65 0.28818 111.65 111.43 111.72 0 64 14 6 0 0 0 0.010087 1 64665 26.124 26.124 1 1.4006 1.213 0 2562700 983320 1579400 3377 219 1236 1273 5331 5331 ATENPEQVASEGLPEPVLR 19 0 1 Unmodified _ATENPEQVASEGLPEPVLR_ 0 0 0 K7EKI4;K7ELF1;K7ELQ0;K7ES61;A0A024R7C5;X6RAY8;Q9BYD3 K7EKI4 K7EKI4 MRPL4 39S ribosomal protein L4, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1024.0259 2 1018.51838 2035.0222 60747.52 0.32932 0.00033542 0.049413 5.0328E-05 0.37874 0.00038575 1019.02004653772 1023.52250825425 111.48 0.30908 111.48 111.3 111.61 7.6294E-06 56 16 6 0 0 0 0.00055787 1 63646 38.799 38.799 1 1.7305 1.5107 0 3535600 1498000 2037600 3378 219 1236 1273 5332 5332 ATEPVIAFYEK 11 1 0 Unmodified _ATEPVIAFYEK_ 0 0 0 Q6FGX9;Q53EY8;Q5T9B7;P00568;H0Y4J6 Q6FGX9 Q6FGX9 AK1 Adenylate kinase isoenzyme 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.3392 2 634.332079 1266.6496 76906.65 0.92438 0.00058637 -0.53363 -0.0003385 0.39075 0.00024786 634.332000511001 638.338924399553 85.142 0.39469 85.142 84.911 85.306 7.6294E-06 103 33 6 0 0 0 0.0005685 1 50996 74.162 74.162 1 2.6127 2.5596 0 21680000 6510700 15169000 3379 1436 1237 1274 5333 5333 ATEQSLDPPIEEEHQLR 17 0 1 Unmodified _ATEQSLDPPIEEEHQLR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.9962 3 664.660476 1990.9596 74704.65 0.56251 0.00037388 0.89047 0.00059186 1.453 0.00096574 664.995587018631 667.9967333932 61.694 0.52621 61.694 61.392 61.918 0 176 41 6 0 0 0 4.5631E-05 2 35359 50.827 50.827 1 1.1024 1.1194 0 18261000 8753300 9507900 3380 1581 1238 1275 5334;5335 5335 ATESGAQSAPLPMEGVDISPK 21 1 0 Oxidation (M) _ATESGAQSAPLPM(ox)EGVDISPK_ ATESGAQSAPLPM(1)EGVDISPK ATESGAQSAPLPM(62.29)EGVDISPK 0 1 0 B2R9U2;Q02790;F5H120 B2R9U2 B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.0164 2 1051.00953 2100.0045 NaN NaN NaN -0.12716 -0.00013365 NaN NaN NaN NaN 76.679 0.15646 76.679 76.582 76.739 0 0 0 0 1.1893E-06 2 45204 62.287 56.681 1 NaN NaN 0 3945900 0 3945900 3381 868 1239 1276 5336;5337 5336 680 ATEVAADALGEEWK 14 1 0 Unmodified _ATEVAADALGEEWK_ 0 0 0 A2A3R5 A2A3R5 A2A3R5 RPS6 40S ribosomal protein S6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.3694 2 745.362096 1488.70964 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.779 1 81.779 81.279 82.279 0 0 0 0 0.00012503 1 48772 91.937 66.72 1 3382 648 1240 1277 5338 5338 ATEVAADALGEEWK 14 1 0 Unmodified _ATEVAADALGEEWK_ 0 0 0 A2A3R5 A2A3R5 A2A3R5 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 749.3695 2 745.362096 1488.70964 73298.24 0.60399 0.00045019 -0.64291 -0.0004792 -0.038922 -2.9011E-05 745.360907654296 749.369423928355 93.594 0.64515 93.594 93.305 93.95 0 168 43 6 0 0 0 5.7376E-05 2 51430 91.961 91.961 1 1.7509 1.3839 0 3200300 1052300 2147900 3383 648 1240 1277 5339;5340 5339 ATFAFGAQTSTTADQGAAK 19 1 0 Unmodified _ATFAFGAQTSTTADQGAAK_ 0 0 0 A0A024QZW7;P49790 A0A024QZW7 A0A024QZW7 NUP153 Nuclear pore complex protein Nup153 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.4429 2 922.44468 1842.87481 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.993 1 64.993 64.493 65.493 0 0 0 0 0.002161 1 37396 53.967 48.124 1 3384 31 1241 1278 5341 5341 ATFCLPILGVK 11 1 0 Unmodified _ATFCLPILGVK_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.8497 2 609.849384 1217.68422 77735.13 0.68669 0.00041878 -0.072388 -4.4146E-05 0.61431 0.00037463 609.849321963813 613.856615189234 119.64 0.6899 119.64 119.34 120.03 0 245 45 8 0 0 0 0.00042 2 76908 79.906 79.906 1 0.88771 0.96882 0 50425000 25946000 24479000 3385 1427 1242 1279 5342;5343 5343 ATFCLPILGVK 11 1 0 Unmodified _ATFCLPILGVK_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.8498 2 609.849384 1217.68422 77461.5 0.5787 0.00035292 0.042796 2.6099E-05 0.62149 0.00037902 609.849428836359 613.856639497272 119.12 0.60318 119.12 118.83 119.43 -7.6294E-06 225 40 8 0 0 0 0.00044003 2 78346 78.334 78.334 1 0.86866 0.96796 0 51739000 28049000 23689000 3386 1427 1242 1279 5344;5345 5345 ATFCLPILGVK 11 1 0 Unmodified _ATFCLPILGVK_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.8569 2 609.849384 1217.68422 76829.82 0.73823 0.00045021 -0.35154 -0.00021438 0.3867 0.00023583 609.849228555398 613.856386219552 132.03 0.61096 132.03 131.75 132.36 0 168 28 9 0 0 0 0.029206 1 80124 39.305 39.305 1 1.2409 0.96454 0 15327000 6778700 8547800 3387 1427 1242 1279 5346 5346 ATFCLPILGVK 11 1 0 Unmodified _ATFCLPILGVK_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.8516 2 609.849384 1217.68422 74810.95 0.92821 0.00056607 -0.078782 -4.8045E-05 0.84943 0.00051803 609.849394397513 613.85654420834 131.77 0.59839 131.77 131.47 132.07 0 134 22 9 0 0 0 0.0020808 2 79043 62.582 62.582 1 1.1701 0.93895 0 18432000 8263100 10169000 3388 1427 1242 1279 5347;5348 5348 ATFDAISK 8 1 0 Unmodified _ATFDAISK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;H0YEN5;E9PQD7;Q9BSW5;O60249;Q6ZNN8;Q8NI62 P15880;Q8NI62 P15880 RPS2;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.7267 2 426.726718 851.438883 91278.37 0.23305 9.945E-05 0.19022 8.117E-05 0.42327 0.00018062 426.726584405094 430.7337691211 38.907 1.0406 38.907 38.431 39.472 0 377 84 8 0 0 0 0.0037164 1 19924 95.909 61.193 1 1.0427 1.2104 0 245540000 120780000 124770000 3389 1485;1930 1243 1280 5349 5349 ATFDAISK 8 1 0 Unmodified _ATFDAISK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;H0YEN5;E9PQD7;Q9BSW5;O60249;Q6ZNN8;Q8NI62 P15880;Q8NI62 P15880 RPS2;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.7265 2 426.726718 851.438883 91132.62 -0.28026 -0.0001196 0.33861 0.00014449 0.058346 2.4898E-05 426.726700395909 430.73380983272 38.01 1.0354 38.01 37.534 38.57 3.8147E-06 340 81 8 0 0 0 0.0098174 2 19717 73.665 46.544 1 1.0519 1.2379 0 404670000 189350000 215320000 3390 1485;1930 1243 1280 5350;5351 5350 ATFDAISK 8 1 0 Unmodified _ATFDAISK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;H0YEN5;E9PQD7;Q9BSW5;O60249;Q6ZNN8;Q8NI62 P15880;Q8NI62 P15880 RPS2;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 430.7337 2 426.726718 851.438883 91823.73 -0.22461 -9.5849E-05 0.31041 0.00013246 0.085799 3.6613E-05 426.726753473646 430.733868848214 43.738 1.1003 43.738 43.374 44.475 0 354 74 7 0 0 0 0.038692 2 20620 47.869 32.237 1 0.872 0.713 0 34363000 18430000 15933000 3391 1485;1930 1243 1280 5352;5353 5353 ATFDAISK 8 1 0 Unmodified _ATFDAISK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;H0YEN5;E9PQD7;Q9BSW5;O60249;Q6ZNN8;Q8NI62 P15880;Q8NI62 P15880 RPS2;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 426.7267 2 426.726718 851.438883 90413.05 -0.41956 -0.00017904 0.31671 0.00013515 -0.10285 -4.3889E-05 426.726802905449 430.733826429615 43.781 1.0688 43.781 43.395 44.463 0 376 68 8 0 0 0 0.055133 1 20035 41.876 32.36 1 0.89259 0.73679 0 30906000 16525000 14381000 3392 1485;1930 1243 1280 5354 5354 ATFLGLTNEK 10 1 0 Unmodified _ATFLGLTNEK_ 0 0 0 E7EMW7;O95071 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.3057 2 547.298039 1092.58152 81824.79 0.62939 0.00034447 -0.17361 -9.5017E-05 0.45578 0.00024945 547.297909985766 551.304898799615 73.067 0.14757 73.067 72.972 73.119 7.6294E-06 38 12 5 0 0 0 0.00013082 2 42882 96.331 34.332 1 1.459 1.529 0 30222000 13226000 16996000 3393 1218 1244 1281 5355;5356 5355 ATFLGLTNEK 10 1 0 Unmodified _ATFLGLTNEK_ 0 0 0 E7EMW7;O95071 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.2977 2 547.298039 1092.58152 80124.68 0.27824 0.00015228 -0.24317 -0.00013309 0.035076 1.9197E-05 547.297726144989 551.304950319578 71.688 0.17067 71.688 71.571 71.742 0 30 8 5 0 0 0 0.00063908 1 43014 83.623 33.663 1 1.4801 1.5043 0 30140000 12843000 17296000 3394 1218 1244 1281 5357 5357 ATGEADVEFVTHEDAVAAMSK 21 1 0 Oxidation (M) _ATGEADVEFVTHEDAVAAM(ox)SK_ ATGEADVEFVTHEDAVAAM(1)SK ATGEADVEFVTHEDAVAAM(54.83)SK 0 1 0 Q53F48;A0A024QZK8;P31942;A0A024QZP1;B4DHY1 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.6751 3 732.003802 2192.98958 70627.4 0.74352 0.00054426 -0.15565 -0.00011393 0.58787 0.00043032 732.003841261849 734.675175551972 70.511 0.78665 70.511 70.069 70.856 0 313 66 7 0 0 0 2.2804E-07 1 40835 54.834 45.079 1 4.4663 4.8172 0 37439000 7420400 30019000 3395 23 1245 1282 5358 5358 9 ATGEADVEFVTHEDAVAAMSK 21 1 0 Oxidation (M) _ATGEADVEFVTHEDAVAAM(ox)SK_ ATGEADVEFVTHEDAVAAM(1)SK ATGEADVEFVTHEDAVAAM(92.93)SK 0 1 0 Q53F48;A0A024QZK8;P31942;A0A024QZP1;B4DHY1 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.0103 3 732.003802 2192.98958 71184.52 0.69237 0.00050682 -0.25817 -0.00018898 0.4342 0.00031784 732.337815259174 735.009394899038 69.199 0.65728 69.199 68.912 69.569 0 300 54 8 0 0 0 1.1781E-11 2 41042 92.932 64.856 1 4.3882 4.839 0 43688000 8861800 34826000 3396 23 1245 1282 5359;5360 5359 9 ATGGGLSSVGGGSSTIK 17 1 0 Unmodified _ATGGGLSSVGGGSSTIK_ 0 0 0 CON__P04259;B4DKV4 CON__P04259 CON__P04259 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.3735 2 718.372995 1434.73144 NaN NaN NaN -0.57504 -0.0004131 NaN NaN NaN NaN 41.517 0.53662 41.517 41.281 41.818 0 0 0 0 0.048377 1 22019 32.295 23.396 1 NaN NaN 0 15985000 15985000 0 + 3397 1154 1246 1283 5361 5361 ATGGGLSSVGGGSSTIK 17 1 0 Unmodified _ATGGGLSSVGGGSSTIK_ 0 0 0 CON__P04259;B4DKV4 CON__P04259 CON__P04259 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.3722 2 718.372995 1434.73144 NaN NaN NaN -0.16299 -0.00011709 NaN NaN NaN NaN 40.606 0.53477 40.606 40.305 40.84 0 0 0 0 3.1879E-09 1 21580 100.22 83.28 1 NaN NaN 0 16618000 16618000 0 + 3398 1154 1246 1283 5362 5362 ATGGGLSSVGGGSSTIK 17 1 0 Unmodified _ATGGGLSSVGGGSSTIK_ 0 0 0 CON__P04259;B4DKV4 CON__P04259 CON__P04259 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.3735 2 718.372995 1434.73144 NaN NaN NaN 0.024881 1.7874E-05 NaN NaN NaN NaN 48.594 0.47989 48.594 48.349 48.829 -3.8147E-06 0 0 0 0.0016242 1 23093 57.042 43.951 1 NaN NaN 0 1904000 1904000 0 + 3399 1154 1246 1283 5363 5363 ATGILLYGLASR 12 0 1 Unmodified _ATGILLYGLASR_ 0 0 0 Q53HS0;P47897;A8K3A8;B4DNN3;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;A0A0U1RRI9;A0A0U1RQE9;A0A0U1RQL2;C9J165;F2Z2V6;I3QNU8 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.866 2 617.861338 1233.70812 77972.34 0.47707 0.00029476 0.34554 0.0002135 0.82261 0.00050826 617.862017400177 622.865263577672 104.01 0.61061 104.01 103.64 104.25 0 140 48 4 0 0 0 0.00075687 3 64110 66.262 47.951 1 1.5837 1.5769 0 8142700 3080200 5062500 3400 1575 1247 1284 5364;5365;5366 5364 ATGILLYGLASR 12 0 1 Unmodified _ATGILLYGLASR_ 0 0 0 Q53HS0;P47897;A8K3A8;B4DNN3;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;A0A0U1RRI9;A0A0U1RQE9;A0A0U1RQL2;C9J165;F2Z2V6;I3QNU8 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8619 2 617.861338 1233.70812 NaN NaN NaN 0.17686 0.00010927 NaN NaN NaN NaN 103.12 0.43983 103.12 102.96 103.4 0 0 0 0 0.03481 1 65193 57.149 41.998 1 NaN NaN 0 6459500 6459500 0 3401 1575 1247 1284 5367 5367 ATGILLYGLASR 12 0 1 Unmodified _ATGILLYGLASR_ 0 0 0 Q53HS0;P47897;A8K3A8;B4DNN3;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;A0A0U1RRI9;A0A0U1RQE9;A0A0U1RQL2;C9J165;F2Z2V6;I3QNU8 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.8624 2 617.861338 1233.70812 77879.63 0.98872 0.00061089 0.44601 0.00027557 1.4347 0.00088646 618.363059645223 622.865547335407 115.79 0.50436 115.79 115.5 116 0 67 22 6 0 0 0 0.009173 1 67936 47.302 36.544 1 0.86907 0.73082 0 3090500 1679800 1410700 3402 1575 1247 1284 5368 5368 ATGILLYGLASR 12 0 1 Unmodified _ATGILLYGLASR_ 0 0 0 Q53HS0;P47897;A8K3A8;B4DNN3;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;A0A0U1RRI9;A0A0U1RQE9;A0A0U1RQL2;C9J165;F2Z2V6;I3QNU8 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.8659 2 617.861338 1233.70812 79037.12 0.66724 0.00041226 -0.19739 -0.00012196 0.46986 0.00029031 617.861303263869 622.864908127204 115.56 0.35862 115.56 115.37 115.73 0 53 15 5 0 0 0 0.016659 1 66801 42.031 31.003 1 0.7426 0.67194 0 2150000 1169500 980540 3403 1575 1247 1284 5369 5369 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.8463 2 606.845353 1211.67615 77922.34 0.46246 0.00028064 0.49459 0.00030014 0.95705 0.00058078 606.845417038371 610.85273907139 78.247 0.57448 78.247 78.111 78.685 0 160 50 4 0 0 0 0.0083323 1 46339 47.894 34.802 1 0.77716 0.80069 0 17366000 8995500 8370400 3404 1489 1248 1285 5370 5370 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.8454 2 606.845353 1211.67615 79385.8 0.81207 0.0004928 -0.2658 -0.0001613 0.54627 0.0003315 606.84510291509 610.852252240813 143.65 1.2515 143.65 143.24 144.49 0 342 133 4 0 0 0 0.016226 2 90894 42.336 24.472 1 0.58374 0.66675 0 1754800 1232100 522700 3405 1489 1248 1285 5371;5372 5372 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.697 2 606.845353 1211.67615 NaN NaN NaN 0.34008 0.00020638 NaN NaN NaN NaN 76.005 2.5979 76.005 75.513 78.111 0 0 0 0 2.3628E-73 3 44798 202.34 133.72 1 NaN NaN 0 5110100000 5110100000 0 3406 1489 1248 1285 5373;5374;5375 5374 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.8453 2 606.845353 1211.67615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.687 1 78.687 78.187 79.187 -7.6294E-06 0 0 0 0.026073 1 46609 48.004 32.122 1 3407 1489 1248 1285 5376 5376 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.6778 2 606.845353 1211.67615 NaN NaN NaN 0.60798 0.00036895 NaN NaN NaN NaN 74.869 3.0246 74.869 74.325 77.35 0 0 0 0 4.4672E-73 4 45185 198.45 122.63 1 NaN NaN 0 5799800000 5799800000 0 3408 1489 1248 1285 5377;5378;5379;5380 5378 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.8457 2 606.845353 1211.67615 NaN NaN NaN 0.29998 0.00018204 NaN NaN NaN NaN 86.752 3.4847 86.752 85.839 89.324 0 0 0 0 0.016841 2 48267 52.391 29.071 1 NaN NaN 0 1024900000 1024900000 0 3409 1489 1248 1285 5381;5382 5382 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 606.8472 2 606.845353 1211.67615 NaN NaN NaN 0.2788 0.00016919 NaN NaN NaN NaN 86.805 5.5597 86.805 86.012 91.572 0 0 0 0 0.0022016 2 46942 69.346 49.042 1 NaN NaN 0 891170000 891170000 0 3410 1489 1248 1285 5383;5384 5383 ATGPVVEQAVR 11 0 1 Unmodified _ATGPVVEQAVR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.8146 2 563.814387 1125.61422 81033 0.99789 0.00056262 -0.066271 -3.7364E-05 0.93162 0.00052526 563.814474742076 568.818402468233 38.171 0.59885 38.171 37.894 38.493 0 259 49 8 0 0 0 0.0069324 1 19600 53.517 41.47 1 0.86061 0.97918 0 113800000 57956000 55847000 3411 2081 1249 1286 5385 5385 ATGPVVEQAVR 11 0 1 Unmodified _ATGPVVEQAVR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.8185 2 563.814387 1125.61422 81233.83 0.56233 0.00031705 -0.40193 -0.00022661 0.16041 9.0439E-05 563.813985049182 568.818272459725 43.384 0.55958 43.384 43.117 43.676 3.8147E-06 206 36 8 0 0 0 0.0024553 2 20402 61.593 52.236 1 1.2243 1.0007 0 15969000 7334200 8634500 3412 2081 1249 1286 5386;5387 5387 ATGPVVEQAVR 11 0 1 Unmodified _ATGPVVEQAVR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.8185 2 563.814387 1125.61422 80251.96 0.36046 0.00020323 -0.11484 -6.4749E-05 0.24562 0.00013848 563.814191589842 568.81844728044 43.446 0.55074 43.446 43.169 43.72 0 210 34 8 0 0 0 0.0076189 2 19865 52.278 49.023 1 1.2057 0.98165 0 12526000 5606700 6919400 3413 2081 1249 1286 5388;5389 5389 ATHDGAPELGAGGTR 15 0 1 Unmodified _ATHDGAPELGAGGTR_ 0 0 0 Q9BXW7;A8MYZ9;B3KVW8 Q9BXW7 Q9BXW7 CECR5 Cat eye syndrome critical region protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.5638 3 470.563778 1408.6695 NaN NaN NaN -1.9903 -0.00093656 NaN NaN NaN NaN 22.782 0.23826 22.782 22.63 22.869 -1.9073E-06 0 0 0 0.029499 1 8767 22.154 13.2 1 NaN NaN 0 3375300 3375300 0 3414 2015 1250 1287 5390 5390 ATHGQTCARPMCIPPSYADLGK 22 1 1 Acetyl (Protein N-term),Oxidation (M) _(ac)ATHGQTCARPM(ox)CIPPSYADLGK_ ATHGQTCARPM(1)CIPPSYADLGK ATHGQTCARPM(65.15)CIPPSYADLGK 1 1 1 A0A0A0MR02;A0A024QZT0;P45880;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 836.7258 3 830.383854 2488.12973 65859.7 0.7467 0.00062004 -0.46178 -0.00038346 0.28491 0.00023659 830.718198327464 836.391579207734 65.491 1.4999 65.491 64.927 66.427 0 448 136 7 0 0 0 1.4471E-08 2 37954 65.149 63.404 1 3.1707 3.6008 0 24179000 6325000 17854000 3415 28 1251 1288 5391;5392 5392 16 ATHGQTCARPMCIPPSYADLGK 22 1 1 Acetyl (Protein N-term),Oxidation (M) _(ac)ATHGQTCARPM(ox)CIPPSYADLGK_ ATHGQTCARPM(1)CIPPSYADLGK ATHGQTCARPM(68.55)CIPPSYADLGK 1 1 1 A0A0A0MR02;A0A024QZT0;P45880;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.7256 3 830.383854 2488.12973 67262.83 0.65328 0.00054247 -0.15663 -0.00013007 0.49664 0.00041241 830.718171872989 836.391455728071 64.323 1.4346 64.323 63.613 65.048 0 569 130 8 0 0 0 1.0558E-08 1 37947 68.552 65.499 1 3.1166 3.5947 0 29318000 6642700 22676000 3416 28 1251 1288 5393 5393 16 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.601 3 457.601616 1369.78302 87911.34 0.052511 2.4029E-05 -0.78441 -0.00035895 -0.7319 -0.00033492 457.601591235993 460.272570048038 50.498 0.51613 50.498 50.152 50.668 0 421 49 11 0 0 0 0.00024306 2 27724 58.32 58.32 1 0.73723 0.89815 0 2791700000 1554800000 1236900000 3417 1462 1252 1289 5394;5395 5394 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.9062 2 685.898786 1369.78302 73344.94 0.45025 0.00030883 -0.09476 -6.4996E-05 0.35549 0.00024383 685.898638181471 689.905765053273 50.626 0.45482 50.626 50.213 50.668 0 196 43 6 0 0 0 8.2696E-05 2 27747 82.261 82.261 1 0.70118 0.79669 0 163620000 96893000 66727000 3418 1462 1252 1289 5396;5397 5396 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.3691 2 685.898786 1369.78302 73442.52 0.64856 0.00044485 0.064771 4.4426E-05 0.71333 0.00048927 685.898836706189 689.905802443498 50.763 0.39221 50.763 50.617 51.009 0 125 35 8 0 0 0 1.0515E-06 1 28112 116.77 116.77 1 0.63139 0.7126 0 135120000 82098000 53021000 3419 1462 1252 1289 5398 5398 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.6017 3 457.601616 1369.78302 87745.67 0.3356 0.00015357 -0.48011 -0.0002197 -0.14451 -6.6126E-05 457.602192851222 460.27259831152 47.362 1.5338 47.362 46.957 48.491 0 784 111 12 0 0 0 8.0702E-05 4 26100 62.088 60.628 1 0.68516 0.81249 0 3868000000 2227300000 1640700000 3420 1462 1252 1289 5399;5400;5401;5402 5399 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.9078 2 685.898786 1369.78302 73205.26 0.71098 0.00048766 0.22405 0.00015367 0.93503 0.00064133 685.89895351762 689.905988501 47.287 0.71013 47.287 47.039 47.749 0 306 52 8 0 0 0 1.6264E-09 2 26331 152.27 131.12 1 0.68703 0.80091 0 256140000 139770000 116360000 3421 1462 1252 1289 5403;5404 5404 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.9062 2 685.898786 1369.78302 71983.46 0.60206 0.00041295 -0.23422 -0.00016065 0.36784 0.0002523 685.89859396624 689.905687194352 56.696 0.85806 56.696 56.388 57.246 0 374 56 9 0 0 0 6.7537E-05 2 28510 102.52 102.52 1 0.88984 0.72244 0 27210000 14195000 13015000 3422 1462 1252 1289 5405;5406 5406 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 457.6018 3 457.601616 1369.78302 NaN NaN NaN 0.034331 1.571E-05 NaN NaN NaN NaN 56.687 2.4784 56.687 56.319 58.797 0 0 0 0 0.0042432 1 28460 49.31 39.531 1 NaN NaN 0 202000000 202000000 0 3423 1462 1252 1289 5407 5407 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.9063 2 685.898786 1369.78302 72991.18 0.61672 0.000423 -0.17047 -0.00011693 0.44625 0.00030608 685.898620545671 689.905778951309 56.611 0.94495 56.611 56.333 57.278 0 443 64 8 0 0 0 0.00013161 2 27964 93.096 93.096 1 0.88535 0.73293 0 33613000 17269000 16344000 3424 1462 1252 1289 5408;5409 5409 ATIEDILFK 9 1 0 Unmodified _ATIEDILFK_ 0 0 0 R4GMS9;Q86U80;D6RJD3;B4DKI6;D6RID8;Q6P1K8;Q13888;D6RAW1;D6RIT7;D6RGC9 R4GMS9 R4GMS9 GTF2H2;GTF2H2C General transcription factor IIH subunit 2-like protein;General transcription factor IIH subunit 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.2983 2 525.297507 1048.58046 NaN NaN NaN -0.13367 -7.0218E-05 NaN NaN NaN NaN 109.64 0.36771 109.64 109.48 109.85 0 0 0 0 0.028466 1 70374 53.968 35.982 1 NaN NaN 0 2553700 2553700 0 3425 989 1253 1290 5410 5410 ATIEDILFK 9 1 0 Unmodified _ATIEDILFK_ 0 0 0 R4GMS9;Q86U80;D6RJD3;B4DKI6;D6RID8;Q6P1K8;Q13888;D6RAW1;D6RIT7;D6RGC9 R4GMS9 R4GMS9 GTF2H2;GTF2H2C General transcription factor IIH subunit 2-like protein;General transcription factor IIH subunit 2 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.2975 2 525.297507 1048.58046 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.24 1 121.24 120.74 121.74 0 0 0 0 0.041169 1 71231 49.418 32.642 1 3426 989 1253 1290 5411 5411 ATILDLSCNK 10 1 0 Unmodified _ATILDLSCNK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.7951 2 567.794806 1133.57506 79251.81 0.47201 0.000268 0.26625 0.00015118 0.73826 0.00041918 567.794967740521 571.801919386167 69.546 0.77507 69.546 69.133 69.908 0 285 65 6 0 0 0 2.3092E-09 2 40341 128.12 106.04 1 0.88772 0.95898 0 36765000 19296000 17469000 3427 1958 1254 1291 5412;5413 5413 ATILDLSCNK 10 1 0 Unmodified _ATILDLSCNK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.7953 2 567.794806 1133.57506 79591.5 0.72366 0.00041089 0.28987 0.00016459 1.0135 0.00057548 567.795017441887 571.802128786796 68.294 0.88303 68.294 67.946 68.829 0 240 70 6 0 0 0 7.6247E-12 3 40494 141.52 114.83 1 0.90414 0.99504 0 42710000 21498000 21212000 3428 1958 1254 1291 5414;5415;5416 5415 ATILDLSCNK 10 1 0 Unmodified _ATILDLSCNK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.7945 2 567.794806 1133.57506 78574.11 0.53731 0.00030508 0.05734 3.2558E-05 0.59465 0.00033764 567.794816172826 571.8019317245 79.106 0.97833 79.106 78.661 79.639 0 208 57 5 0 0 0 0.0032667 2 42429 65.305 52.268 1 0.69221 0.54125 0 11816000 6965800 4850200 3429 1958 1254 1291 5417;5418 5417 ATILDLSCNK 10 1 0 Unmodified _ATILDLSCNK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.7948 2 567.794806 1133.57506 79925.05 0.42227 0.00023976 0.53067 0.00030131 0.95294 0.00054107 567.794911291414 571.801995298472 79.29 0.9379 79.29 78.881 79.818 0 247 56 7 0 0 0 0.0011058 2 41760 76.1 58.191 1 0.71814 0.59012 0 9664900 5638000 4026900 3430 1958 1254 1291 5419;5420 5419 ATISLSDSDLLR 12 0 1 Unmodified _ATISLSDSDLLR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.849 2 645.848624 1289.6827 75541.29 0.86871 0.00056106 -0.0091639 -5.9185E-06 0.85955 0.00055514 645.848563753831 650.852701885138 95.59 0.67665 95.59 95.339 96.016 0 195 55 5 0 0 0 0.0005793 1 58091 68.893 59.536 1 1.0849 1.1526 0 42535000 20399000 22136000 3431 122 1255 1292 5421 5421 ATISLSDSDLLR 12 0 1 Unmodified _ATISLSDSDLLR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3389 2 645.848624 1289.6827 76864.44 0.77411 0.00049996 -0.89853 -0.00058032 -0.12443 -8.0362E-05 645.848241547198 650.852535092322 94.941 0.85681 94.941 94.542 95.398 0 328 73 7 0 0 0 0.017605 1 58833 59.426 48.275 1 1.0044 1.1562 0 74305000 40401000 33903000 3432 122 1255 1292 5422 5422 ATISNDGATILK 12 1 0 Unmodified _ATISNDGATILK_ 0 0 0 Q6IBT3;Q53HV2;Q99832;F8WAM2 Q6IBT3 Q6IBT3 CCT7 T-complex protein 1 subunit eta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.3405 2 602.33261 1202.65067 80364.55 0.73526 0.00044287 0.067268 4.0518E-05 0.80252 0.00048339 602.332011000399 606.339748205512 57.219 0.4207 57.219 56.973 57.394 3.8147E-06 84 29 5 0 0 0 0.00068455 1 32180 67.334 55.74 1 5.2219 5.4343 0 14911000 1711100 13199000 3433 1791 1256 1293 5423 5423 ATISNDGATILK 12 1 0 Unmodified _ATISNDGATILK_ 0 0 0 Q6IBT3;Q53HV2;Q99832;F8WAM2 Q6IBT3 Q6IBT3 CCT7 T-complex protein 1 subunit eta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.3393 2 602.33261 1202.65067 NaN NaN NaN -0.13447 -8.0997E-05 NaN NaN NaN NaN 56.273 0.44017 56.273 56.028 56.468 3.8147E-06 0 0 0 0.023056 1 32269 50.108 34.847 1 NaN NaN 0 10014000 0 10014000 3434 1791 1256 1293 5424 5424 ATKPQPVNTSSVTVK 15 2 0 Unmodified _ATKPQPVNTSSVTVK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.9356 2 778.935762 1555.85697 69760.09 0.53058 0.00041329 0.24699 0.00019239 0.77757 0.00060568 778.935831926836 786.950124262916 28.484 0.22945 28.484 28.36 28.589 0 55 15 5 0 0 0 5.968E-05 2 13441 92.19 72.531 1 0.74123 0.88553 0 18896000 9174300 9721600 3435 895 1257 1294 5425;5426 5426 ATKPQPVNTSSVTVK 15 2 0 Unmodified _ATKPQPVNTSSVTVK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.9689 3 519.626267 1555.85697 83247.81 0.27906 0.00014501 -0.06694 -3.4784E-05 0.21212 0.00011022 519.960462377369 524.969048289951 28.493 0.26763 28.493 28.344 28.612 0 77 17 5 0 0 0 0.00010118 1 13424 62.377 52.32 1 0.72613 0.85733 0 42919000 26309000 16610000 3436 895 1257 1294 5427 5427 ATKPQPVNTSSVTVK 15 2 0 Unmodified _ATKPQPVNTSSVTVK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.4374 2 778.935762 1555.85697 68973.8 0.29736 0.00023162 0.15658 0.00012197 0.45394 0.00035359 778.935676066619 786.950142045394 27.642 0.19793 27.642 27.539 27.737 0 46 10 6 0 0 0 0.0057336 1 12887 48.822 48.822 1 0.85571 0.98977 0 38991000 19559000 19432000 3437 895 1257 1294 5428 5428 ATKPQPVNTSSVTVK 15 2 0 Unmodified _ATKPQPVNTSSVTVK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.9689 3 519.626267 1555.85697 NaN NaN NaN 0.0016149 8.3914E-07 NaN NaN NaN NaN 27.639 0.2543 27.639 27.483 27.737 0 0 0 0 0.0050427 1 12896 55.851 49.946 1 NaN NaN 0 29084000 0 29084000 3438 895 1257 1294 5429 5429 ATKPQPVNTSSVTVK 15 2 0 Unmodified _ATKPQPVNTSSVTVK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 786.9507 2 778.935762 1555.85697 69050.34 0.40655 0.00031668 0.091924 7.1603E-05 0.49848 0.00038828 778.935934199277 786.950093233282 32.399 0.32522 32.399 32.248 32.573 0 69 14 8 0 0 0 0.0039304 1 13935 55.314 55.314 1 1.3436 1.1602 0 4742800 1981500 2761300 3439 895 1257 1294 5430 5430 ATKPQPVNTSSVTVK 15 2 0 Unmodified _ATKPQPVNTSSVTVK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 519.6263 3 519.626267 1555.85697 82502.29 0.05921 3.0767E-05 0.051676 2.6852E-05 0.11089 5.7619E-05 519.62626562764 524.969067286659 32.381 0.3858 32.381 32.23 32.616 0 105 17 10 0 0 0 0.026154 1 13970 15.514 13.215 1 1.3677 1.1672 0 16676000 7404300 9271200 3440 895 1257 1294 5431 5431 ATLDVFFVPLK 11 1 0 Unmodified _ATLDVFFVPLK_ 0 0 0 B3KTW3;Q9NXV6 B3KTW3 B3KTW3 CDKN2AIP CDKN2A-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.371 2 625.363182 1248.71181 82434.76 0.92012 0.00057541 0.32861 0.0002055 1.2487 0.00078091 625.36344431396 629.370565211885 125.58 0.36588 125.58 125.42 125.79 0 64 22 4 0 0 0 0.00028904 2 81589 88.948 88.948 1 1.5012 1.6496 0 3071100 1397700 1673400 3441 945 1258 1295 5432;5433 5432 ATLDVFFVPLK 11 1 0 Unmodified _ATLDVFFVPLK_ 0 0 0 B3KTW3;Q9NXV6 B3KTW3 B3KTW3 CDKN2AIP CDKN2A-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.3715 2 625.363182 1248.71181 81976.96 1.0419 0.00065155 -0.13854 -8.664E-05 0.90333 0.00056491 625.363236340995 629.370045912209 125.12 0.31404 125.12 124.96 125.27 0 75 22 4 0 0 0 0.00018274 2 83273 93.551 93.551 1 1.4252 1.5585 0 3339000 1307700 2031200 3442 945 1258 1295 5434;5435 5434 ATLEVILRPK 10 1 1 Unmodified _ATLEVILRPK_ 0 0 1 Q9NQT4;B2RC50;M0R102 Q9NQT4 Q9NQT4 EXOSC5 Exosome complex component RRP46 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3224 2 570.360973 1138.70739 80552.09 0.66781 0.00038089 0.19332 0.00011026 0.86114 0.00049116 570.361072684252 579.372216778237 67.307 0.56414 67.307 67.116 67.68 0 148 44 5 0 0 0 0.052907 1 39968 56.432 51.892 1 0.73319 0.83856 0 21934000 12765000 9168300 3443 2060 1259 1296 5436 5436 ATLEVILRPK 10 1 1 Unmodified _ATLEVILRPK_ 0 0 1 Q9NQT4;B2RC50;M0R102 Q9NQT4 Q9NQT4 EXOSC5 Exosome complex component RRP46 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.3732 2 570.360973 1138.70739 NaN NaN NaN 0.23068 0.00013157 NaN NaN NaN NaN 78.332 0.61076 78.332 78.055 78.666 0 0 0 0 0.0015564 1 41179 94.85 78.31 1 NaN NaN 0 1793000 0 1793000 3444 2060 1259 1296 5437 5437 ATLLLESGIR 10 0 1 Unmodified _ATLLLESGIR_ 0 0 0 G3V547;G3V4D9;G3V5V3;O60524 G3V547 G3V547 NEMF Nuclear export mediator factor NEMF MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.826 2 536.821681 1071.62881 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.227 1 83.227 82.727 83.727 -7.6294E-06 0 0 0 0.041621 1 50981 46.462 14.142 1 3445 1274 1260 1297 5438 5438 ATLLQQR 7 0 1 Unmodified _ATLLQQR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 420.252 2 415.248152 828.481751 91291.42 0.18913 7.8536E-05 -0.20536 -8.5277E-05 -0.016234 -6.7411E-06 415.248008882279 420.252077066806 29.018 0.54881 29.018 28.809 29.357 0 128 30 7 0 0 0 0.01019 2 13856 124.32 71.641 1 1.6446 1.9469 0 374280000 138300000 235980000 3446 1569 1261 1298 5439;5440 5439 ATLLQQR 7 0 1 Unmodified _ATLLQQR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.2485 2 415.248152 828.481751 93022.12 0.22416 9.308E-05 0.07431 3.0857E-05 0.29847 0.00012394 415.248059528674 420.252188821026 28.327 0.44249 28.327 28.149 28.591 0 143 29 8 0 0 0 0.0038206 2 13480 133.99 79.463 1 1.7068 1.983 0 362230000 121700000 240530000 3447 1569 1261 1298 5441;5442 5441 ATLLQQR 7 0 1 Unmodified _ATLLQQR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 415.2483 2 415.248152 828.481751 92066.84 -0.46437 -0.00019283 0.40622 0.00016868 -0.058151 -2.4147E-05 415.248236290561 420.252406916916 32.224 0.72128 32.224 31.958 32.679 3.8147E-06 164 35 7 0 0 0 0.024609 2 13770 89.903 51.084 1 3.2935 2.8358 0 57325000 13722000 43603000 3448 1569 1261 1298 5443;5444 5444 ATLLQQR 7 0 1 Unmodified _ATLLQQR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 415.2482 2 415.248152 828.481751 91541.84 -0.33797 -0.00014034 0.27205 0.00011297 -0.065916 -2.7371E-05 415.248168772033 420.252312548548 32.183 0.70491 32.183 31.892 32.596 0 205 36 9 0 0 0 0.024609 2 13247 89.903 51.084 1 3.3144 2.8914 0 47239000 11025000 36214000 3449 1569 1261 1298 5445;5446 5446 ATLNAFLYR 9 0 1 Unmodified _ATLNAFLYR_ 0 0 0 Q9NVI7;H0Y2W2;Q5T2N8;Q5SV16 Q9NVI7 Q9NVI7 ATAD3A;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.8002 2 534.795466 1067.57638 83657.15 0.91725 0.00049054 0.7739 0.00041388 1.6911 0.00090442 534.795620512407 539.799435583223 86.385 0.56576 86.385 86.198 86.763 0 144 42 5 0 0 0 0.007781 2 52075 73.616 53.076 1 1.6027 1.683 0 39548000 12569000 26979000 3450 2074 1262 1299 5447;5448 5447 ATLQEILPEVLK 12 1 0 Unmodified _ATLQEILPEVLK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.4037 2 677.403035 1352.79152 NaN NaN NaN 0.12126 8.2142E-05 NaN NaN NaN NaN 120.37 0.67916 120.37 120.05 120.73 0 0 0 0 2.1502E-47 1 77522 175.34 160.08 1 NaN NaN 0 57871000 57871000 0 3451 1997 1263 1300 5449 5449 ATLQEILPEVLK 12 1 0 Unmodified _ATLQEILPEVLK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.4037 2 677.403035 1352.79152 NaN NaN NaN -0.069244 -4.6906E-05 NaN NaN NaN NaN 119.81 0.68543 119.81 119.52 120.21 0 0 0 0 6.7161E-37 1 79003 158.94 139.15 1 NaN NaN 0 70809000 70809000 0 3452 1997 1263 1300 5450 5450 ATLQEILPEVLK 12 1 0 Unmodified _ATLQEILPEVLK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.9045 2 677.403035 1352.79152 NaN NaN NaN -0.50107 -0.00033943 NaN NaN NaN NaN 132.8 0.56017 132.8 132.59 133.15 0 0 0 0 4.5741E-05 1 79789 95.483 86.525 1 NaN NaN 0 26462000 26462000 0 3453 1997 1263 1300 5451 5451 ATLSAEVYR 9 0 1 Unmodified _ATLSAEVYR_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.2734 2 505.269281 1008.52401 85631.53 0.54346 0.00027459 0.13893 7.0199E-05 0.68239 0.00034479 505.269262762542 510.273479848901 46.594 0.72707 46.594 46.201 46.928 0 300 62 6 0 0 0 0.021548 1 25073 49.418 41.187 1 0.85908 0.97773 0 114560000 61236000 53325000 3454 2042 1264 1301 5452 5452 ATLSAEVYR 9 0 1 Unmodified _ATLSAEVYR_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.2734 2 505.269281 1008.52401 85200.23 0.4595 0.00023217 0.98454 0.00049746 1.444 0.00072963 505.269367490002 510.273506174956 45.556 0.90484 45.556 45.085 45.99 0 424 79 11 0 0 0 0.0010227 2 24886 91.069 68.937 1 0.83799 0.95669 0 146370000 80027000 66347000 3455 2042 1264 1301 5453;5454 5454 ATLSAEVYR 9 0 1 Unmodified _ATLSAEVYR_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.2734 2 505.269281 1008.52401 85684.28 0.43518 0.00021988 -0.13997 -7.0722E-05 0.29521 0.00014916 505.269184540838 510.273246250997 53.866 0.86666 53.866 53.543 54.41 0 266 67 6 0 0 0 0.0032669 2 26738 72.23 62.104 1 1.3185 1.0796 0 16444000 7049400 9395100 3456 2042 1264 1301 5455;5456 5455 ATLSAEVYR 9 0 1 Unmodified _ATLSAEVYR_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.2737 2 505.269281 1008.52401 85100.9 0.24116 0.00012185 0.21498 0.00010863 0.45614 0.00023047 505.269326143754 510.273337160511 54.252 1.0544 54.252 53.868 54.922 0 340 60 9 0 0 0 0.010089 2 26329 59.597 48.905 1 1.2472 1.0193 0 13089000 5862900 7226000 3457 2042 1264 1301 5457;5458 5457 ATLSSIR 7 0 1 Unmodified _ATLSSIR_ 0 0 0 P46779;H0YKD8;O60251 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 374.2219 2 374.221603 746.428653 94451.58 0.088209 3.301E-05 -0.19658 -7.3564E-05 -0.10837 -4.0554E-05 374.221526674698 379.225718560604 29.013 0.53537 29.013 28.742 29.277 0 149 29 8 0 0 0 0.02688 1 13909 74.415 26.242 1 0.88953 1.0554 0 688840000 302860000 385980000 3458 1572 1265 1302 5459 5459 ATLSSIR 7 0 1 Unmodified _ATLSSIR_ 0 0 0 P46779;H0YKD8;O60251 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 374.2214 2 374.221603 746.428653 97954.12 0.062518 2.3396E-05 0.10022 3.7505E-05 0.16274 6.0901E-05 374.22166332357 379.225750734178 28.309 0.46728 28.309 28.095 28.562 -1.9073E-06 146 29 10 0 0 0 1.2441E-06 2 13518 154.11 71.851 1 0.94369 1.1071 0 798120000 391890000 406230000 3459 1572 1265 1302 5460;5461 5461 ATLSSIR 7 0 1 Unmodified _ATLSSIR_ 0 0 0 P46779;H0YKD8;O60251 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 379.2257 2 374.221603 746.428653 96389.7 -0.089926 -3.3652E-05 0.031009 1.1604E-05 -0.058917 -2.2048E-05 374.221575439639 379.225664158153 32.55 0.70505 32.55 32.269 32.974 0 149 33 8 0 0 0 0.037624 2 14004 60.76 15.706 1 0.917 0.77553 0 30583000 15725000 14858000 3460 1572 1265 1302 5462;5463 5462 ATLSSIR 7 0 1 Unmodified _ATLSSIR_ 0 0 0 P46779;H0YKD8;O60251 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 374.2217 2 374.221603 746.428653 97028.64 0.051324 1.9206E-05 0.091594 3.4277E-05 0.14292 5.3483E-05 374.221591304404 379.225684152397 32.549 0.66761 32.549 32.254 32.921 0 158 31 8 0 0 0 0.041494 1 13492 58.981 15.981 1 0.93791 0.81627 0 24787000 13299000 11488000 3461 1572 1265 1302 5464 5464 ATNDEIFSILK 11 1 0 Unmodified _ATNDEIFSILK_ 0 0 0 A0A024R179;Q09161 A0A024R179 A0A024R179 NCBP1 Nuclear cap-binding protein subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.8419 2 625.834985 1249.65542 77250.37 0.8842 0.00055336 0.28583 0.00017888 1.17 0.00073225 625.834952208016 629.842551634686 108.88 0.65942 108.88 108.52 109.18 -7.6294E-06 113 42 4 0 0 0 0.00041914 1 68101 79.974 66.596 1 1.4229 1.4696 0 11011000 4797200 6213700 3462 73 1266 1303 5465 5465 ATNESEDEIPQLVPIGK 17 1 0 Unmodified _ATNESEDEIPQLVPIGK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 924.478 2 920.470363 1838.92617 63160.45 0.72625 0.0006685 -0.46832 -0.00043107 0.25794 0.00023742 920.470088277248 924.476956451093 103.5 1.0265 103.5 103.01 104.04 7.6294E-06 758 84 13 0 0 0 1.0931E-18 2 63593 158.58 158.58 1 0.7879 0.93528 0 522380000 293540000 228840000 3463 1415 1267 1304 5466;5467 5466 ATNESEDEIPQLVPIGK 17 1 0 Unmodified _ATNESEDEIPQLVPIGK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 920.4739 2 920.470363 1838.92617 63206.35 0.82965 0.00076367 -0.37987 -0.00034966 0.44978 0.00041401 920.470105761881 924.477110907525 102.8 1.0323 102.8 102.38 103.42 0 737 82 14 0 0 0 1.1853E-12 2 64699 117.93 117.93 1 0.8233 0.97005 0 567880000 320900000 246980000 3464 1415 1267 1304 5468;5469 5469 ATNESEDEIPQLVPIGK 17 1 0 Unmodified _ATNESEDEIPQLVPIGK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 920.9724 2 920.470363 1838.92617 63105.96 0.97705 0.00089935 -0.31395 -0.00028898 0.6631 0.00061037 920.971630824703 924.477119850919 115.53 1.3432 115.53 115.14 116.48 -7.6294E-06 395 59 13 0 0 0 1.136E-12 2 67531 118.24 118.24 1 0.83728 0.74411 0 371320000 209680000 161640000 3465 1415 1267 1304 5470;5471 5471 ATNESEDEIPQLVPIGK 17 1 0 Unmodified _ATNESEDEIPQLVPIGK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 920.4705 2 920.470363 1838.92617 63284.82 0.54417 0.00050089 0.14155 0.00013029 0.68572 0.00063119 920.470869403724 924.47757057565 115.36 1.1233 115.36 115.02 116.14 0 404 54 13 0 0 0 6.3184E-09 2 66506 101.53 101.53 1 0.83532 0.72508 0 292790000 158370000 134420000 3466 1415 1267 1304 5472;5473 5473 ATNIEVLSNTFQFTNEAR 18 0 1 Unmodified _ATNIEVLSNTFQFTNEAR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1028.5107 2 1028.01072 2054.00688 59593.2 0.58915 0.00060565 -0.052747 -5.4225E-05 0.5364 0.00055143 1028.51298294989 1033.51585860187 111.27 0.44765 111.27 111.03 111.47 0 165 31 7 0 0 0 1.0095E-11 1 69930 105 105 1 2.6558 2.7846 0 39312000 11571000 27741000 3467 42 1268 1305 5474 5474 ATNIEVLSNTFQFTNEAR 18 0 1 Unmodified _ATNIEVLSNTFQFTNEAR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1033.0177 2 1028.01072 2054.00688 59431.93 0.35284 0.00036272 0.37256 0.000383 0.7254 0.00074572 1028.51273637384 1033.0154001825 110.7 0.43301 110.7 110.48 110.91 0 188 32 8 0 0 0 4.5783E-22 4 71195 125.53 125.53 1 2.6556 2.9025 0 36294000 9011300 27283000 3468 42 1268 1305 5475;5476;5477;5478 5477 ATNIEVLSNTFQFTNEAR 18 0 1 Unmodified _ATNIEVLSNTFQFTNEAR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1033.0149 2 1028.01072 2054.00688 58726.1 0.63919 0.00065709 -1.1858 -0.001219 -0.54658 -0.00056189 1028.51366915122 1033.01181151601 122.42 0.44035 122.42 122.25 122.69 0 94 22 7 0 0 0 1.34E-05 2 72977 77.42 73.843 1 2.0374 1.6657 0 13786000 5535000 8250600 3469 42 1268 1305 5479;5480 5479 ATNIEVLSNTFQFTNEAR 18 0 1 Unmodified _ATNIEVLSNTFQFTNEAR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1028.5199 2 1028.01072 2054.00688 NaN NaN NaN 0.24279 0.00024959 NaN NaN NaN NaN 122.25 0.28496 122.25 122.14 122.42 0 0 0 0 0.026318 1 71940 48.823 37.61 1 NaN NaN 0 5611500 5611500 0 3470 42 1268 1305 5481 5481 ATQAHSLSYAGCNFLR 16 0 1 Acetyl (Protein N-term) _(ac)ATQAHSLSYAGCNFLR_ 1 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 924.9406 2 919.436135 1836.85772 66478.09 1.0818 0.00099462 -0.081637 -7.506E-05 1.0001 0.00091956 919.43659734596 924.941268270005 90.745 0.52985 90.745 90.47 91 0 144 44 5 0 0 0 2.4796E-06 5 54744 95.417 88.719 1 0.84931 0.86867 0 14562000 7906400 6655800 3471 2125 1269 1306 5482;5483;5484;5485;5486 5484 ATQAHSLSYAGCNFLR 16 0 1 Acetyl (Protein N-term) _(ac)ATQAHSLSYAGCNFLR_ 1 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 924.4449 2 919.436135 1836.85772 65728.98 0.69598 0.00063991 0.88179 0.00081075 1.5778 0.0014507 919.436518200678 924.442228341209 89.958 0.4866 89.958 89.721 90.207 0 120 43 5 0 0 0 8.989E-12 2 55552 114.56 107.86 1 1.2252 1.2421 0 20210000 6569100 13641000 3472 2125 1269 1306 5487;5488 5487 ATQAHSLSYAGCNFLR 16 0 1 Acetyl (Protein N-term) _(ac)ATQAHSLSYAGCNFLR_ 1 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 924.4403 2 919.436135 1836.85772 NaN NaN NaN 0.63626 0.000585 NaN NaN NaN NaN 89.805 0.22485 89.805 89.678 89.903 0 0 0 0 0.0023783 1 55431 64.65 43.81 1 NaN NaN 0 6042300 0 6042300 3473 2125 1269 1306 5489 5489 ATQAHSLSYAGCNFLR 16 0 1 Acetyl (Protein N-term) _(ac)ATQAHSLSYAGCNFLR_ 1 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 919.9377 2 919.436135 1836.85772 62505.3 0.56652 0.00052088 -0.31839 -0.00029274 0.24813 0.00022814 919.937760124771 924.941617146926 104.22 0.60541 104.22 103.96 104.57 0 268 40 8 0 0 0 0.00064941 1 59247 51.135 45.528 1 1.3361 1.0955 0 12515000 5625900 6888900 3474 2125 1269 1306 5490 5490 ATQAHSLSYAGCNFLR 16 0 1 Acetyl (Protein N-term) _(ac)ATQAHSLSYAGCNFLR_ 1 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 924.4401 2 919.436135 1836.85772 63017.05 0.26844 0.00024681 0.42045 0.00038658 0.68889 0.00063339 919.437038252694 924.439768855009 104.05 0.52998 104.05 103.79 104.32 7.6294E-06 278 35 10 0 0 0 0.000325 2 58419 60.157 60.157 1 1.3315 1.0956 0 14066000 5998000 8067700 3475 2125 1269 1306 5491;5492 5492 ATQALVLAPTR 11 0 1 Unmodified _ATQALVLAPTR_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.84 2 570.840405 1139.66626 79559.13 0.71398 0.00040757 -0.17623 -0.0001006 0.53774 0.00030697 570.840309296727 575.844372873065 63.857 1.2178 63.857 63.441 64.659 3.8147E-06 614 113 8 0 0 0 1.0318E-08 3 36522 123.79 110.02 1 1.8676 2.211 0 375560000 136590000 238970000 3476 770 1270 1307 5493;5494;5495 5494 ATQALVLAPTR 11 0 1 Unmodified _ATQALVLAPTR_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.8408 2 570.840405 1139.66626 79576.7 0.55645 0.00031765 -0.022332 -1.2748E-05 0.53412 0.0003049 570.840374121547 575.844479970331 62.533 1.2032 62.533 62.098 63.301 0 647 108 8 0 0 0 5.0805E-31 3 36551 182.46 167.82 1 1.864 2.1708 0 440090000 160680000 279410000 3477 770 1270 1307 5496;5497;5498 5497 ATQALVLAPTR 11 0 1 Unmodified _ATQALVLAPTR_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.841 2 570.840405 1139.66626 79873.36 0.48685 0.00027791 0.17839 0.00010183 0.66523 0.00037974 570.840463666527 575.844594068087 72.984 1.1398 72.984 72.572 73.712 -7.6294E-06 448 81 8 0 0 0 1.5071E-06 2 38529 112.13 101.37 1 1.3497 1.116 0 19494000 8221800 11273000 3478 770 1270 1307 5499;5500 5500 ATQALVLAPTR 11 0 1 Unmodified _ATQALVLAPTR_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.8448 2 570.840405 1139.66626 80457.1 0.43121 0.00024615 -0.025414 -1.4508E-05 0.40579 0.00023164 570.840441914329 575.844492027622 73.281 1.1354 73.281 72.872 74.008 0 454 81 9 0 0 0 4.4729E-10 2 37888 130.94 117.17 1 1.3675 1.1485 0 17013000 7020900 9992300 3479 770 1270 1307 5501;5502 5501 ATQEWLEK 8 1 0 Unmodified _ATQEWLEK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.7636 2 502.756007 1003.49746 84238.6 0.16118 8.1037E-05 0.89655 0.00045075 1.0577 0.00053178 502.755893214239 506.763291582772 46.315 0.59692 46.315 45.966 46.562 3.8147E-06 184 42 6 0 0 0 0.019113 2 22209 59.35 48.301 1 1.4084 1.1165 0 4703200 2029000 2674200 3480 186;1747;718 1271 1308 5503;5504 5503 ATQEWLEK 8 1 0 Unmodified _ATQEWLEK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.7631 2 502.756007 1003.49746 85257.96 0.041708 2.0969E-05 1.0669 0.0005364 1.1086 0.00055737 502.756765925881 506.763157821631 46.331 0.67995 46.331 46.053 46.733 0 146 40 6 0 0 0 0.013109 1 21678 66.073 58.922 1 1.402 1.1168 0 4075000 1685800 2389200 3481 186;1747;718 1271 1308 5505 5505 ATQLLEGLVQELQK 14 1 0 Unmodified _ATQLLEGLVQELQK_ 0 0 0 Q8WW55;Q59H39;P51692;C9J4I3 Q8WW55 Q8WW55 STAT5B Signal transducer and activator of transcription;Signal transducer and activator of transcription 5B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.4539 2 785.445963 1568.87737 71084.52 0.81511 0.00064022 -0.10894 -8.557E-05 0.70616 0.00055465 785.44699099664 789.452516070577 121.09 0.57763 121.09 120.7 121.28 0 80 35 7 0 0 0 0.00016448 2 80084 74.392 69.846 1 2.0573 2.101 0 11991000 3480900 8510400 3482 1597 1272 1309 5506;5507 5507 ATQQQHDFTLTQTADGR 17 0 1 Unmodified _ATQQQHDFTLTQTADGR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.309 3 639.973165 1916.89767 75320.73 0.77511 0.00049605 -0.31191 -0.00019962 0.4632 0.00029643 640.307283893279 643.309004354785 39.164 0.49305 39.164 38.968 39.461 0 246 38 10 0 0 0 1.4786E-09 2 20171 104.21 99.102 1 0.65595 0.75219 0 135230000 80125000 55105000 3483 1665 1273 1310 5508;5509 5508 ATQQQHDFTLTQTADGR 17 0 1 Unmodified _ATQQQHDFTLTQTADGR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 964.4597 2 959.45611 1916.89767 62986.07 0.5367 0.00051494 -0.091317 -8.7615E-05 0.44539 0.00042733 959.455918403902 964.961797393028 39.164 0.31141 39.164 39.012 39.324 0 111 23 6 0 0 0 9.3216E-07 2 20191 104.95 94.344 1 0.61287 0.66134 0 48307000 31101000 17206000 3484 1665 1273 1310 5510;5511 5510 ATQQQHDFTLTQTADGR 17 0 1 Unmodified _ATQQQHDFTLTQTADGR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 964.9613 2 959.45611 1916.89767 62969.77 0.2942 0.00028227 0.16045 0.00015395 0.45465 0.00043622 959.95784120159 964.460688818595 37.99 0.31496 37.99 37.819 38.134 0 89 23 7 0 0 0 1.1016E-57 3 19786 225.85 211.29 1 0.71771 0.8271 0 72877000 40739000 32138000 3485 1665 1273 1310 5512;5513;5514 5514 ATQQQHDFTLTQTADGR 17 0 1 Unmodified _ATQQQHDFTLTQTADGR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3074 3 639.973165 1916.89767 74668.11 0.36231 0.00023187 0.11964 7.6568E-05 0.48196 0.00030844 639.973260131132 643.309289467264 37.992 0.49802 37.992 37.781 38.279 0 244 38 9 0 0 0 8.5528E-08 2 19771 97.579 97.579 1 0.65909 0.75246 0 146370000 90582000 55793000 3486 1665 1273 1310 5515;5516 5516 ATQQQHDFTLTQTADGR 17 0 1 Unmodified _ATQQQHDFTLTQTADGR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.9734 3 639.973165 1916.89767 74439.32 0.51843 0.00033178 -0.19192 -0.00012283 0.3265 0.00020895 639.973141008894 643.309030770138 45.135 0.6617 45.135 44.902 45.564 -3.8147E-06 274 47 11 0 0 0 1.4269E-05 1 21526 78.441 78.441 1 0.38301 0.32521 0 33445000 23779000 9666300 3487 1665 1273 1310 5517 5517 ATQQQHDFTLTQTADGR 17 0 1 Unmodified _ATQQQHDFTLTQTADGR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.9733 3 639.973165 1916.89767 74479.13 0.88236 0.00056469 -0.56472 -0.0003614 0.31764 0.00020328 639.972821762467 643.308747119159 45.141 0.74937 45.141 44.889 45.639 0 346 52 9 0 0 0 4.547E-05 2 20947 55.094 55.094 1 0.35981 0.29999 0 15902000 11377000 4525000 3488 1665 1273 1310 5518;5519 5518 ATQTLQANESASDILILR 18 0 1 Unmodified _ATQTLQANESASDILILR_ 0 0 0 A0A1C7CYX1;A0A0A0MSU2;A0PJD3;A0A024R689;Q6PJG2 A0A1C7CYX1 A0A1C7CYX1 ELMSAN1;C14orf43 ELM2 and SANT domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 973.0251 2 972.523461 1943.03237 64481.94 -0.14731 -0.00014326 0.65784 0.00063976 0.51053 0.0004965 972.523790407542 978.03031183119 116.41 0.34274 116.41 116.27 116.61 7.6294E-06 53 14 6 0 0 0 0.023977 1 68411 23.682 23.682 1 1.0188 0.86343 0 2927400 1250000 1677400 3489 638 1274 1311 5520 5520 ATRDELPYTFAAPESYEELR 20 0 2 Unmodified _ATRDELPYTFAAPESYEELR_ 0 0 1 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.9187 3 786.713128 2357.11756 69141.66 0.85279 0.0006709 -0.11231 -8.8358E-05 0.74048 0.00058255 787.047407595614 793.719470586648 101.12 0.91987 101.12 100.7 101.62 0 361 68 7 0 0 0 0.018901 1 62299 24.067 24.067 1 0.99315 1.0738 0 20938000 9393600 11545000 3490 790 1275 1312 5521 5521 ATRDELPYTFAAPESYEELR 20 0 2 Unmodified _ATRDELPYTFAAPESYEELR_ 0 0 1 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.3857 3 786.713128 2357.11756 68319.75 0.76968 0.00060552 -0.30788 -0.00024221 0.4618 0.00036331 786.712870746093 793.719301651642 100.22 0.74373 100.22 99.699 100.44 0 335 59 8 0 0 0 1.2308E-06 1 62735 60.561 60.561 1 1.0222 1.1548 0 30288000 11629000 18658000 3491 790 1275 1312 5522 5522 ATRDELPYTFAAPESYEELR 20 0 2 Unmodified _ATRDELPYTFAAPESYEELR_ 0 0 1 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.3836 3 786.713128 2357.11756 67902.36 0.94217 0.00074122 -0.11561 -9.095E-05 0.82656 0.00065027 787.047446236441 793.385062722103 112.74 0.51109 112.74 112.56 113.07 0 160 23 10 0 0 0 1.4195E-06 2 65475 61.616 61.616 1 1.3715 1.1224 0 33706000 14690000 19016000 3492 790 1275 1312 5523;5524 5523 ATRDELPYTFAAPESYEELR 20 0 2 Unmodified _ATRDELPYTFAAPESYEELR_ 0 0 1 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.3857 3 786.713128 2357.11756 67760.05 0.76825 0.00060439 0.09079 7.1426E-05 0.85904 0.00067582 787.047586754793 793.385223137047 112.63 0.66075 112.63 112.39 113.06 0 189 32 10 0 0 0 1.7244E-06 2 64449 55.453 55.453 1 1.5139 1.4096 0 30641000 12472000 18169000 3493 790 1275 1312 5525;5526 5525 ATSELILLPVTGLECVGDR 19 0 1 Unmodified _ATSELILLPVTGLECVGDR_ 0 0 0 A0A087X295;Q9NNW5;B4DK45;C9K020;B3KRR8;E9PBK6;B4DLP3;E5RFX3;F8WE36;Q9NW86 A0A087X295 A0A087X295 WDR6 WD repeat-containing protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1022.0413 2 1022.04317 2042.07179 NaN NaN NaN -0.28035 -0.00028653 NaN NaN NaN NaN 128.89 0.13176 128.89 128.82 128.95 0 0 0 0 2.8425E-09 1 84069 80.469 48.829 1 NaN NaN 0 8741900 8741900 0 3494 451 1276 1313 5527 5527 ATSELILLPVTGLECVGDR 19 0 1 Unmodified _ATSELILLPVTGLECVGDR_ 0 0 0 A0A087X295;Q9NNW5;B4DK45;C9K020;B3KRR8;E9PBK6;B4DLP3;E5RFX3;F8WE36;Q9NW86 A0A087X295 A0A087X295 WDR6 WD repeat-containing protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1022.5463 2 1022.04317 2042.07179 NaN NaN NaN 0.34355 0.00035112 NaN NaN NaN NaN 128.5 0.10785 128.5 128.44 128.55 0 0 0 0 0.0001519 1 85910 63.091 24.457 1 NaN NaN 0 8493600 8493600 0 3495 451 1276 1313 5528 5528 ATSEVPGSQASPNPVPGDGLHR 22 0 1 Unmodified _ATSEVPGSQASPNPVPGDGLHR_ 0 0 0 Q96GM8;B3KSC7 Q96GM8 Q96GM8 TOE1 Target of EGR1 protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.3611 3 725.025929 2172.05596 73657.3 0.27422 0.00019882 0.84488 0.00061256 1.1191 0.00081138 725.026668526617 728.696804173045 52.971 0.38251 52.971 52.75 53.133 -3.8147E-06 120 28 6 0 0 0 0.0031789 1 29439 34.615 34.615 1 1.1652 1.1868 0 18567000 9099000 9468100 3496 1968 1277 1314 5529 5529 ATSEVPGSQASPNPVPGDGLHR 22 0 1 Unmodified _ATSEVPGSQASPNPVPGDGLHR_ 0 0 0 Q96GM8;B3KSC7 Q96GM8 Q96GM8 TOE1 Target of EGR1 protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.697 3 725.025929 2172.05596 71392.78 0.40408 0.00029297 0.28583 0.00020724 0.68992 0.00050021 725.361466482843 728.361499278998 51.745 0.46401 51.745 51.567 52.031 0 151 38 6 0 0 0 1.7766E-05 1 29346 40.158 40.158 1 1.3019 1.3859 0 24361000 10715000 13646000 3497 1968 1277 1314 5530 5530 ATSFLLALEPELEAR 15 0 1 Unmodified _ATSFLLALEPELEAR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.4519 2 830.451245 1658.88794 67595.19 0.61817 0.00051336 0.3042 0.00025263 0.92237 0.00076598 830.451450787047 835.455758927036 125.02 0.56275 125.02 124.77 125.33 0 215 37 9 0 0 0 0.0002231 2 81147 68.536 68.536 1 1.1313 1.1678 0 20027000 9337900 10689000 3498 1444 1278 1315 5531;5532 5531 ATSFLLALEPELEAR 15 0 1 Unmodified _ATSFLLALEPELEAR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.4507 2 830.451245 1658.88794 67850.42 1.2105 0.0010053 -0.007682 -6.3795E-06 1.2029 0.00099891 830.451202334761 835.455543488343 124.62 0.52428 124.62 124.36 124.88 0 202 33 8 0 0 0 5.251E-15 2 82843 125.72 125.72 1 1.2142 1.3021 0 25287000 11564000 13723000 3499 1444 1278 1315 5533;5534 5533 ATSGAATPVIASTK 14 1 0 Unmodified _ATSGAATPVIASTK_ 0 0 0 B4E3J2;F5H586;Q5H9S4;H0Y6W5;D3DRJ1;B4DR27;B1APH0;Q6ZN30 B4E3J2 B4E3J2 BNC2;DKFZp686A01127;hCG_27250 Zinc finger protein basonuclin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.8585 2 637.851167 1273.68778 NaN NaN NaN -0.41613 -0.00026543 NaN NaN NaN NaN 36.49 0.34306 36.49 36.353 36.696 -3.8147E-06 0 0 0 0.050721 1 18778 38.58 32.275 1 NaN NaN 0 4716700 0 4716700 3500 819 1279 1316 5535 5535 ATSGAATPVIASTK 14 1 0 Unmodified _ATSGAATPVIASTK_ 0 0 0 B4E3J2;F5H586;Q5H9S4;H0Y6W5;D3DRJ1;B4DR27;B1APH0;Q6ZN30 B4E3J2 B4E3J2 BNC2;DKFZp686A01127;hCG_27250 Zinc finger protein basonuclin-2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.8578 2 637.851167 1273.68778 NaN NaN NaN -1.0476 -0.0006682 NaN NaN NaN NaN 42.284 0.51005 42.284 42.031 42.542 0 0 0 0 0.023969 1 19781 42.629 38.33 1 NaN NaN 0 1077000 0 1077000 3501 819 1279 1316 5536 5536 ATSILEFYR 9 0 1 Unmodified _ATSILEFYR_ 0 0 0 H0Y9G6;E7ETU7;B4DKM0;P09001;D6RC14;E9PF06;B4DW56 H0Y9G6 H0Y9G6 MRPL3 39S ribosomal protein L3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.2971 2 550.292756 1098.57096 85103.02 0.50508 0.00027794 0.15981 8.794E-05 0.66488 0.00036588 550.292807586064 555.296951127292 106.23 0.36093 106.23 106.08 106.44 0 58 17 5 0 0 0 0.041466 1 60679 41.448 41.448 1 1.0798 0.95412 0 1474900 702580 772360 3502 992 1280 1317 5537 5537 ATTGTQTLLSSGTR 14 0 1 Unmodified _ATTGTQTLLSSGTR_ 0 0 0 M0R3F6;A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01;B4DSQ4 M0R3F6 M0R3F6 SUGP2;SFRS14 SURP and G-patch domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8687 2 697.367712 1392.72087 74384.93 0.90224 0.00062919 -0.38306 -0.00026713 0.51918 0.00036206 697.868742837682 702.371310995906 44.331 0.37964 44.331 44.098 44.478 -3.8147E-06 94 34 4 0 0 0 0.0064663 1 24237 42.031 35.362 1 1.2424 1.2194 0 13798000 6289800 7508400 3503 228 1281 1318 5538 5538 ATTGYPDPYGGEK 13 1 0 Unmodified _ATTGYPDPYGGEK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.3165 2 678.309332 1354.60411 NaN NaN NaN 0.34585 0.0002346 NaN NaN NaN NaN 40.395 0.59507 40.395 40.24 40.835 0 0 0 0 0.0091914 1 21118 53.567 43.044 1 NaN NaN 0 12769000 0 12769000 3504 397;1622 1282 1319 5539 5539 ATTLPTDFNYNVDTLVQLHLK 21 1 0 Unmodified _ATTLPTDFNYNVDTLVQLHLK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.0919 3 801.756668 2402.24818 67974.51 0.96426 0.0007731 0.011435 9.1681E-06 0.9757 0.00078227 802.091046600407 804.762216312659 120.4 1.0967 120.4 120.01 121.11 -7.6294E-06 606 78 12 0 0 0 8.1492E-09 1 77475 76.176 76.176 1 0.86427 0.9758 0 137220000 72408000 64812000 3505 740 1283 1320 5540 5540 ATTLPTDFNYNVDTLVQLHLK 21 1 0 Unmodified _ATTLPTDFNYNVDTLVQLHLK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.0911 3 801.756668 2402.24818 67451.34 1.0281 0.00082425 -0.039711 -3.1838E-05 0.98834 0.00079241 802.090956247232 804.762303315965 119.93 1.2574 119.93 119.49 120.74 7.6294E-06 633 92 12 0 0 0 0.00019659 1 78938 35.834 35.834 1 0.87029 1.0083 0 212270000 115550000 96726000 3506 740 1283 1320 5541 5541 ATTLPTDFNYNVDTLVQLHLK 21 1 0 Unmodified _ATTLPTDFNYNVDTLVQLHLK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 802.0922 3 801.756668 2402.24818 67314.66 1.1916 0.00095537 -0.075962 -6.0903E-05 1.1156 0.00089446 802.090959448285 804.762152448512 132.76 0.60271 132.76 132.52 133.12 0 217 27 13 0 0 0 1.5196E-11 2 80720 92.492 92.492 1 1.6734 1.4477 0 115010000 42692000 72322000 3507 740 1283 1320 5542;5543 5543 ATTLPTDFNYNVDTLVQLHLK 21 1 0 Unmodified _ATTLPTDFNYNVDTLVQLHLK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 802.0919 3 801.756668 2402.24818 67530.76 1.1611 0.00093088 -0.25664 -0.00020576 0.90441 0.00072512 802.090750275049 804.762016564561 132.51 0.55521 132.51 132.27 132.83 0 189 22 13 0 0 0 1.8258E-11 1 79600 90.968 90.968 1 1.7679 1.5055 0 86033000 29065000 56969000 3508 740 1283 1320 5544 5544 ATTLPTDFNYNVDTLVQLHLKPGTR 25 1 1 Unmodified _ATTLPTDFNYNVDTLVQLHLKPGTR_ 0 0 1 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.3742 4 704.375075 2813.47119 NaN NaN NaN -0.21623 -0.00015231 NaN NaN NaN NaN 112.89 0.2936 112.89 112.75 113.05 0 0 0 0 0.00012524 1 73083 41.763 34.487 1 NaN NaN 0 11148000 11148000 0 3509 740 1284 1321 5545 5545 ATTQILEELK 10 1 0 Unmodified _ATTQILEELK_ 0 0 0 P49454;Q9UHT7;A0A087WTY4 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.3324 2 573.324254 1144.63395 82785.46 0.47595 0.00027288 -0.087462 -5.0144E-05 0.38849 0.00022273 573.324146501796 577.331292369677 80.956 0.4524 80.956 80.821 81.273 0 106 37 4 0 0 0 0.0033968 1 48290 64.711 39.936 1 1.1485 1.1913 0 14802000 5748700 9052900 3510 1581 1285 1322 5546 5546 ATTVAGVPCQEWAAQEPHQHSIFTPETNPQSGLER 35 0 1 Unmodified _ATTVAGVPCQEWAAQEPHQHSIFTPETNPQSGLER_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 969.7128 4 969.211689 3872.81765 NaN NaN NaN -0.025081 -2.4309E-05 NaN NaN NaN NaN 103.01 0.50623 103.01 102.82 103.33 0 0 0 0 0.0045303 2 58471 27.967 24.419 1 NaN NaN 0 10860000 10860000 0 + 3511 1157 1286 1323 5547;5548 5547 ATTVAGVPCQEWAAQEPHQHSIFTPETNPQSGLER 35 0 1 Unmodified _ATTVAGVPCQEWAAQEPHQHSIFTPETNPQSGLER_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 969.7129 4 969.211689 3872.81765 NaN NaN NaN -0.0057202 -5.5441E-06 NaN NaN NaN NaN 102.74 0.5336 102.74 102.54 103.08 0 0 0 0 0.012334 1 57393 24.473 19.759 1 NaN NaN 0 15852000 15852000 0 + 3512 1157 1286 1323 5549 5549 ATVGILITTIASK 13 1 0 Unmodified _ATVGILITTIASK_ 0 0 0 A0A024RAM0;Q92973 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.4043 2 644.397753 1286.78095 78184.21 0.61849 0.00039856 0.57997 0.00037373 1.1985 0.00077229 644.397819966686 648.405393494117 109.82 0.64078 109.82 109.57 110.21 0 142 46 5 0 0 0 0.0020216 1 68696 55.452 55.452 1 2.5246 2.5869 0 10582000 3489500 7092200 3513 309 1287 1324 5550 5550 ATVGILITTIASK 13 1 0 Unmodified _ATVGILITTIASK_ 0 0 0 A0A024RAM0;Q92973 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.4051 2 644.397753 1286.78095 78820.71 0.8884 0.00057248 0.036038 2.3223E-05 0.92444 0.0005957 644.397217175369 648.404951528291 109.18 0.55613 109.18 108.91 109.47 7.6294E-06 109 39 5 0 0 0 0.00012053 2 69891 77.062 77.062 1 3.0946 3.2298 0 10967000 3065700 7901000 3514 309 1287 1324 5551;5552 5552 ATVGILITTIASK 13 1 0 Unmodified _ATVGILITTIASK_ 0 0 0 A0A024RAM0;Q92973 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.4052 2 644.397753 1286.78095 79091.25 0.89365 0.00057586 0.00061495 3.9627E-07 0.89426 0.00057626 644.397380365102 648.405101311197 121.34 0.27116 121.34 121.19 121.46 0 42 11 6 0 0 0 0.007839 1 72202 44.614 44.614 1 1.8087 1.4481 0 2886200 752620 2133600 3515 309 1287 1324 5553 5553 ATVIQAFR 8 0 1 Unmodified _ATVIQAFR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.268 2 453.263802 904.513051 95958.03 0.25498 0.00011557 0.080937 3.6686E-05 0.33591 0.00015226 453.263966383842 458.267883786975 59.796 0.5847 59.796 59.577 60.162 -3.8147E-06 141 49 5 0 0 0 0.016634 1 34060 60.972 31.634 1 1.0626 1.0832 0 14780000 8403200 6377100 3516 1392 1288 1325 5554 5554 ATVLQTVFEDYVHSSER 17 0 1 Unmodified _ATVLQTVFEDYVHSSER_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.6657 3 660.993566 1979.95887 76993.16 0.91065 0.00060193 -0.093437 -6.1761E-05 0.81721 0.00054017 661.327616686071 664.32981236763 115.68 0.44566 115.68 115.38 115.82 0 118 30 5 0 0 0 0.0054504 1 73633 26.808 26.808 1 0.79153 0.78909 0 8672500 4087400 4585100 3517 1053;1268 1289 1326 5555 5555 ATVLQTVFEDYVHSSER 17 0 1 Unmodified _ATVLQTVFEDYVHSSER_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.6641 3 660.993566 1979.95887 74652.52 0.59701 0.00039462 0.16384 0.0001083 0.76086 0.00050292 660.993658933206 664.664272237989 127.32 0.5112 127.32 127.08 127.59 0 109 20 8 0 0 0 0.030849 2 76662 18.76 18.76 1 1.1293 0.97178 0 7532800 3435400 4097400 3518 1053;1268 1289 1326 5556;5557 5556 ATVLQTVFEDYVHSSER 17 0 1 Unmodified _ATVLQTVFEDYVHSSER_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.6647 3 660.993566 1979.95887 75290.42 0.64618 0.00042712 0.038299 2.5315E-05 0.68448 0.00045244 660.993617464759 664.664049650695 127 0.44241 127 126.82 127.26 0 99 19 8 0 0 0 0.011972 2 75561 23.073 20.929 1 1.137 0.94327 0 5143300 2390100 2753200 3519 1053;1268 1289 1326 5558;5559 5558 ATVSAPFGK 9 1 0 Unmodified _ATVSAPFGK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.2497 2 439.242535 876.470518 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.429 1 42.429 41.929 42.929 3.8147E-06 0 0 0 0.0033474 1 22558 71.877 42.728 1 3520 1754 1290 1327 5560 5560 AVAEFLNR 8 0 1 Unmodified _AVAEFLNR_ 0 0 0 Q96SH1;P05549 Q96SH1 Q96SH1 TFAP2A Transcription factor AP-2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.2538 2 460.253434 918.492316 96871.38 0.28676 0.00013198 1.0833 0.00049861 1.3701 0.00063059 460.254917579608 465.257869457196 73.135 0.29103 73.135 73.009 73.3 7.6294E-06 69 26 4 0 0 0 0.041999 1 42903 46.663 46.663 1 2.2614 2.3162 0 26117000 9008500 17108000 3521 1448 1291 1328 5561 5561 AVAFFLESIAMHDIIAAEK 19 1 0 Oxidation (M) _AVAFFLESIAM(ox)HDIIAAEK_ AVAFFLESIAM(1)HDIIAAEK AVAFFLESIAM(44.57)HDIIAAEK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.7039 3 698.030964 2091.07106 77633.38 1.0393 0.00072547 -0.17036 -0.00011891 0.86895 0.00060655 698.030662560362 700.702586341689 124.14 0.54299 124.14 123.83 124.37 0 52 36 4 0 0 0 7.1181E-05 1 82591 44.567 44.567 1 0.9173 0.96696 0 4304300 2537800 1766500 3522 1665 1292 1329 5562 5562 1442 AVAFHPR 7 0 1 Unmodified _AVAFHPR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.2247 2 399.22448 796.434407 94092.88 -0.21268 -8.4907E-05 0.34862 0.00013918 0.13594 5.427E-05 399.22453184235 404.228630133868 20.829 0.58753 20.829 20.627 21.215 0 103 26 7 0 0 0 0.00050691 2 7174 143.22 71.23 1 0.90555 1.0482 0 165910000 88130000 77781000 3523 1726 1293 1330 5563;5564 5563 AVAFHPR 7 0 1 Unmodified _AVAFHPR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 399.2246 2 399.22448 796.434407 95328.45 0.28932 0.00011551 -0.1068 -4.2638E-05 0.18252 7.2867E-05 399.224450455258 404.228471032933 20.582 0.37857 20.582 20.45 20.829 0 45 11 5 0 0 0 0.0061717 2 6861 130.84 63.46 1 0.89697 1.0322 0 210170000 112500000 97669000 3524 1726 1293 1330 5565;5566 5566 AVAFHPR 7 0 1 Unmodified _AVAFHPR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 399.2244 2 399.22448 796.434407 95139.25 -0.24132 -9.6343E-05 0.24636 9.8354E-05 0.005037 2.0109E-06 399.224443856632 404.228612522796 21.979 0.54257 21.979 21.843 22.386 1.9073E-06 76 20 7 0 0 0 0.016852 1 6865 97.64 48.329 1 1.166 0.96448 0 19601000 8714000 10887000 3525 1726 1293 1330 5567 5567 AVAFHPR 7 0 1 Unmodified _AVAFHPR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 399.2244 2 399.22448 796.434407 94639.55 -0.44141 -0.00017622 0.30262 0.00012081 -0.13879 -5.5409E-05 399.224530257785 404.228634885597 21.779 0.53175 21.779 21.624 22.155 0 86 18 8 0 0 0 0.026818 1 6285 79.833 37.06 1 1.1634 0.97652 0 16918000 7130600 9787800 3526 1726 1293 1330 5568 5568 AVAHHTTAAFIR 12 0 1 Unmodified _AVAHHTTAAFIR_ 0 0 0 A8K2M0;P43686 A8K2M0 A8K2M0 PSMC4 26S protease regulatory subunit 6B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.9094 3 432.238678 1293.6942 NaN NaN NaN 0.31766 0.00013731 NaN NaN NaN NaN 26.253 0.19296 26.253 26.145 26.338 0 0 0 0 0.0082025 1 11729 48.568 38.563 1 NaN NaN 0 5786000 0 5786000 3527 710 1294 1331 5569 5569 AVAILCNHQR 10 0 1 Unmodified _AVAILCNHQR_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.3142 2 591.314032 1180.61351 75904.17 0.52694 0.00031159 -0.12846 -7.596E-05 0.39849 0.00023563 591.314023758021 596.31808714856 28.425 0.65401 28.425 28.196 28.85 0 183 40 8 0 0 0 2.0837E-30 2 13364 181.81 165.47 1 0.90457 1.06 0 213710000 102510000 111200000 3528 1470 1295 1332 5570;5571 5571 AVAILCNHQR 10 0 1 Unmodified _AVAILCNHQR_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.8812 3 394.545113 1180.61351 91251.91 0.0067004 2.6436E-06 -0.063582 -2.5086E-05 -0.056882 -2.2442E-05 394.545150074718 397.881151741297 28.424 0.56322 28.424 28.245 28.809 0 179 35 8 0 0 0 0.00088898 2 13387 54.982 35.79 1 1.0058 1.1862 0 244340000 117050000 127290000 3529 1470 1295 1332 5572;5573 5572 AVAILCNHQR 10 0 1 Unmodified _AVAILCNHQR_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.3184 2 591.314032 1180.61351 76165.15 0.31398 0.00018566 -0.13337 -7.8864E-05 0.18061 0.00010679 591.314010598772 596.318123945271 27.652 0.51218 27.652 27.483 27.995 0 123 28 8 0 0 0 3.7366E-22 2 12843 163.67 155.51 1 0.98896 1.148 0 338410000 171040000 167370000 3530 1470 1295 1332 5574;5575 5574 AVAILCNHQR 10 0 1 Unmodified _AVAILCNHQR_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 394.545 3 394.545113 1180.61351 92351.3 -0.06951 -2.7425E-05 -0.21468 -8.4701E-05 -0.28419 -0.00011213 394.545077681644 397.881111122378 27.655 0.51836 27.655 27.461 27.98 0 146 28 9 0 0 0 2.1081E-06 2 12853 86.136 77.237 1 0.94709 1.1005 0 365730000 187280000 178450000 3531 1470 1295 1332 5576;5577 5576 AVAILCNHQR 10 0 1 Unmodified _AVAILCNHQR_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 397.881 3 394.545113 1180.61351 92854.61 0.041668 1.644E-05 -0.41323 -0.00016304 -0.37156 -0.0001466 394.545087122561 397.881081464779 31.707 0.75557 31.707 31.492 32.248 0 210 41 10 0 0 0 0.010283 2 13479 45.022 32.406 1 1.5185 1.3081 0 62064000 24604000 37460000 3532 1470 1295 1332 5578;5579 5579 AVAILCNHQR 10 0 1 Unmodified _AVAILCNHQR_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.3181 2 591.314032 1180.61351 75308.05 0.34939 0.0002066 -0.24451 -0.00014458 0.10489 6.202E-05 591.314084561043 596.318083195764 31.717 0.80719 31.717 31.462 32.269 1.9073E-06 167 44 8 0 0 0 9.4839E-12 2 13465 139.31 94.232 1 1.5 1.2924 0 64026000 26398000 37628000 3533 1470 1295 1332 5580;5581 5581 AVAILCNHQR 10 0 1 Unmodified _AVAILCNHQR_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 397.8806 3 394.545113 1180.61351 93638.74 0.043674 1.7231E-05 -0.30472 -0.00012023 -0.26104 -0.00010299 394.545064223329 397.88110851471 31.576 0.85969 31.576 31.322 32.181 -1.9073E-06 217 45 9 0 0 0 0.003255 2 12814 44.203 24.441 1 1.4493 1.2643 0 44153000 18149000 26004000 3534 1470 1295 1332 5582;5583 5582 AVAILCNHQR 10 0 1 Unmodified _AVAILCNHQR_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.3182 2 591.314032 1180.61351 75846.59 0.55965 0.00033093 -0.60591 -0.00035828 -0.046259 -2.7353E-05 591.313925185286 596.317802869933 31.592 1.0142 31.592 31.11 32.124 0 217 53 8 0 0 0 1.2248E-06 2 12969 111.82 104.69 1 1.4923 1.3019 0 46254000 18427000 27827000 3535 1470 1295 1332 5584;5585 5585 AVALYFIDK 9 1 0 Unmodified _AVALYFIDK_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061;D3DWJ7 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.2949 2 520.294768 1038.57498 NaN NaN NaN 0.73445 0.00038213 NaN NaN NaN NaN 95.511 1.2432 95.511 95.001 96.244 0 0 0 0 0.0076416 2 58309 69.825 43.223 1 NaN NaN 0 262550000 262550000 0 3536 1470 1296 1333 5586;5587 5587 AVALYFIDK 9 1 0 Unmodified _AVALYFIDK_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061;D3DWJ7 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.2953 2 520.294768 1038.57498 82523.94 0.44433 0.00023118 0.079979 4.1613E-05 0.52431 0.00027279 520.294968833882 524.301844891757 108.5 1.6061 108.5 108.07 109.68 0 432 78 10 0 0 0 0.0043738 3 62222 69.423 52.038 1 1.5843 1.3739 0 127310000 51067000 76244000 3537 1470 1296 1333 5588;5589;5590 5589 AVALYFIDK 9 1 0 Unmodified _AVALYFIDK_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061;D3DWJ7 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.2953 2 520.294768 1038.57498 83540.45 0.34885 0.00018151 0.090895 4.7292E-05 0.43975 0.0002288 520.294933770633 524.301840954659 108.33 2.9489 108.33 107.91 110.86 0 423 81 11 0 0 0 0.005479 3 61123 66.621 49.236 1 1.5011 1.2857 0 124650000 52995000 71655000 3538 1470 1296 1333 5591;5592;5593 5592 AVANEVGAYVSVINGPEIISK 21 1 0 Unmodified _AVANEVGAYVSVINGPEIISK_ 0 0 0 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1066.0786 2 1065.57569 2129.13683 60636.95 0.962 0.0010251 -0.5894 -0.00062805 0.3726 0.00039703 1066.07762611819 1070.08344480366 115.82 0.26762 115.82 115.69 115.95 -7.6294E-06 62 17 6 0 0 0 1.9685E-06 3 73833 49.482 49.482 1 1.1819 1.1907 0 7178800 3722300 3456500 3539 1919 1297 1334 5594;5595;5596 5596 AVANEVGAYVSVINGPEIISK 21 1 0 Unmodified _AVANEVGAYVSVINGPEIISK_ 0 0 0 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1069.5834 2 1065.57569 2129.13683 NaN NaN NaN -0.014358 -1.53E-05 NaN NaN NaN NaN 115.4 0.29176 115.4 115.18 115.47 0 0 0 0 0.00045841 1 75148 46.964 41.241 1 NaN NaN 0 3898200 0 3898200 3540 1919 1297 1334 5597 5597 AVANQTSATFLR 12 0 1 Unmodified _AVANQTSATFLR_ 0 0 0 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8498 2 639.843676 1277.6728 78146.44 0.8453 0.00054086 -0.22342 -0.00014295 0.62188 0.00039791 639.843303625672 644.84774107501 55.949 0.43454 55.949 55.75 56.184 0 114 32 5 0 0 0 1.144E-22 2 31427 155.42 155.42 1 2.063 2.1301 0 20057000 6138100 13919000 3541 1634 1298 1335 5598;5599 5598 AVANQTSATFLR 12 0 1 Unmodified _AVANQTSATFLR_ 0 0 0 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.8486 2 639.843676 1277.6728 79379.02 0.53101 0.00033976 -0.052716 -3.373E-05 0.47829 0.00030603 639.843181753633 644.847924889373 54.913 0.52496 54.913 54.684 55.209 0 158 43 5 0 0 0 4.8821E-08 1 31369 114.4 78.956 1 1.9789 2.0159 0 20581000 7153500 13428000 3542 1634 1298 1335 5600 5600 AVANQTSATFLR 12 0 1 Unmodified _AVANQTSATFLR_ 0 0 0 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.8475 2 639.843676 1277.6728 81365.82 0.6181 0.00039549 0.21016 0.00013447 0.82826 0.00052996 639.843365622605 644.848242466527 64.929 0.49975 64.929 64.73 65.23 0 124 38 4 0 0 0 0.002983 2 33483 57.203 50.315 1 1.3737 1.1928 0 2335300 1146400 1188900 3543 1634 1298 1335 5601;5602 5601 AVANQTSATFLR 12 0 1 Unmodified _AVANQTSATFLR_ 0 0 0 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.8503 2 639.843676 1277.6728 80713.97 0.4111 0.00026304 0.52336 0.00033487 0.93446 0.00059791 639.843588782949 644.8486134654 65.356 0.5399 65.356 65.081 65.621 0 95 38 4 0 0 0 0.00023339 2 32960 85.533 64.967 1 1.5212 1.3254 0 1806100 941910 864170 3544 1634 1298 1335 5603;5604 5604 AVANYDSVEEGEK 13 1 0 Unmodified _AVANYDSVEEGEK_ 0 0 0 E7EWE5;B4DSD0;B4DDM5;B2R659;A0A0S2Z4J1;P51659;E7ER27 E7EWE5 E7EWE5 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.324 2 705.822803 1409.63105 NaN NaN NaN 0.54843 0.0003871 NaN NaN NaN NaN 34.299 0.21156 34.299 34.149 34.36 -3.8147E-06 0 0 0 0.015499 1 17106 50.284 40.052 1 NaN NaN 0 2059600 2059600 0 3545 563 1299 1336 5605 5605 AVANYDSVEEGEK 13 1 0 Unmodified _AVANYDSVEEGEK_ 0 0 0 E7EWE5;B4DSD0;B4DDM5;B2R659;A0A0S2Z4J1;P51659;E7ER27 E7EWE5 E7EWE5 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.3314 2 705.822803 1409.63105 74466.92 0.64443 0.00045486 0.82264 0.00058064 1.4671 0.0010355 706.826933990282 709.829760960395 33.519 0.27424 33.519 33.386 33.66 3.8147E-06 60 21 6 0 0 0 0.0020461 1 16773 55.353 51.335 1 0.92801 0.9208 0 6046000 2949200 3096800 3546 563 1299 1336 5606 5606 AVAQALEVIPR 11 0 1 Unmodified _AVAQALEVIPR_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.8527 2 583.84823 1165.68191 81476.34 0.62916 0.00036734 0.77303 0.00045133 1.4022 0.00081867 583.848955909914 588.85260396467 99.14 0.57979 99.14 98.857 99.437 0 76 32 4 0 0 0 0.01831 1 56038 44.863 36.938 1 1.5644 1.3789 0 1433300 578630 854720 3547 951 1300 1337 5607 5607 AVAQALEVIPR 11 0 1 Unmodified _AVAQALEVIPR_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.8534 2 583.84823 1165.68191 NaN NaN NaN 0.48851 0.00028522 NaN NaN NaN NaN 98.92 0.54884 98.92 98.705 99.254 0 0 0 0 0.033792 1 55030 49.06 31.024 1 NaN NaN 0 693590 0 693590 3548 951 1300 1337 5608 5608 AVASQLDCNFLK 12 1 0 Unmodified _AVASQLDCNFLK_ 0 0 0 V9HW24;A0A087X2I1;P62333;H0YJC0;B4DR91;H0YJS8 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3533 2 683.345194 1364.67584 NaN NaN NaN 0.24081 0.00016455 NaN NaN NaN NaN 81.802 0.49345 81.802 81.564 82.058 0 0 0 0 0.016329 1 48874 52.579 31.708 1 NaN NaN 0 10712000 0 10712000 3549 454 1301 1338 5609 5609 AVASQLDCNFLK 12 1 0 Unmodified _AVASQLDCNFLK_ 0 0 0 V9HW24;A0A087X2I1;P62333;H0YJC0;B4DR91;H0YJS8 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.3531 2 683.345194 1364.67584 NaN NaN NaN 0.48802 0.00033348 NaN NaN NaN NaN 80.681 0.50576 80.681 80.531 81.037 0 0 0 0 1.8589E-05 1 49315 101.54 74.429 1 NaN NaN 0 17186000 0 17186000 3550 454 1301 1338 5610 5610 AVATWHANTER 11 0 1 Unmodified _AVATWHANTER_ 0 0 0 P51531;A0A0U1RQZ9;F6VDE0;B4DK35 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3139 2 628.312543 1254.61053 NaN NaN NaN -1.7922 -0.001126 NaN NaN NaN NaN 23.074 0.35864 23.074 22.91 23.268 1.9073E-06 0 0 0 0.012268 1 9018 56.258 29.744 1 NaN NaN 0 6534400 6534400 0 3551 1595 1302 1339 5611 5611 AVATYHANTER 11 0 1 Unmodified _AVATYHANTER_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.5387 3 411.538793 1231.59455 93827.98 0.010614 4.3681E-06 0.28166 0.00011591 0.29227 0.00012028 411.53890610025 414.874970401537 16.973 0.36711 16.973 16.858 17.225 1.9073E-06 50 11 7 0 0 0 7.2489E-05 2 4194 83.045 68.599 1 0.72259 0.73942 0 26291000 16554000 9737300 3552 695 1303 1340 5612;5613 5612 AVATYHANTER 11 0 1 Unmodified _AVATYHANTER_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8047 2 616.804551 1231.59455 78744.27 0.41115 0.0002536 0.10362 6.3912E-05 0.51477 0.00031751 616.804629150227 621.808857683233 16.972 0.36711 16.972 16.858 17.225 0 57 11 8 0 0 0 1.3217E-12 2 4196 144.77 113.7 1 0.72838 0.75621 0 20763000 11545000 9218200 3553 695 1303 1340 5614;5615 5614 AVAVDSTGTYMATSGLDHQLK 21 1 0 Oxidation (M) _AVAVDSTGTYM(ox)ATSGLDHQLK_ AVAVDSTGTYM(1)ATSGLDHQLK AVAVDSTGTYM(107.45)ATSGLDHQLK 0 1 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.0225 3 727.687926 2180.04195 70641.41 0.53344 0.00038818 -0.25973 -0.000189 0.27371 0.00019918 728.022122104654 730.693622983407 64.287 0.62027 64.287 63.961 64.581 7.6294E-06 400 57 10 0 0 0 3.3641E-16 2 37772 107.45 107.45 1 1.5131 1.7068 0 63012000 26094000 36919000 3554 809 1304 1341 5616;5617 5617 647 AVAVDSTGTYMATSGLDHQLK 21 1 0 Oxidation (M) _AVAVDSTGTYM(ox)ATSGLDHQLK_ AVAVDSTGTYM(1)ATSGLDHQLK AVAVDSTGTYM(42.64)ATSGLDHQLK 0 1 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.0225 3 727.687926 2180.04195 70105.07 0.69525 0.00050592 -0.53727 -0.00039096 0.15798 0.00011496 728.021917655694 730.693335849397 75.576 0.61952 75.576 75.238 75.857 0 234 43 9 0 0 0 1.5316E-05 1 40160 42.64 42.64 1 0.74053 0.58456 0 10731000 5982200 4748400 3555 809 1304 1341 5618 5618 647 AVAVDSTGTYMATSGLDHQLK 21 1 0 Oxidation (M) _AVAVDSTGTYM(ox)ATSGLDHQLK_ AVAVDSTGTYM(1)ATSGLDHQLK AVAVDSTGTYM(79.57)ATSGLDHQLK 0 1 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.694 3 727.687926 2180.04195 70839.7 0.49924 0.00036329 -0.32671 -0.00023774 0.17253 0.00012555 728.022161418433 730.693557634115 75.925 0.68 75.925 75.524 76.204 0 260 45 10 0 0 0 4.692E-09 2 39554 79.568 79.568 1 0.73516 0.60508 0 10356000 6206300 4150100 3556 809 1304 1341 5619;5620 5619 647 AVAVDSTGTYMATSGLDHQLK 21 1 0 Unmodified _AVAVDSTGTYMATSGLDHQLK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.028 3 722.356288 2164.04703 71121.26 0.80698 0.00058292 -0.26646 -0.00019248 0.54052 0.00039045 722.690457991799 725.361830155875 90.64 0.42484 90.64 90.444 90.868 7.6294E-06 163 23 10 0 0 0 7.7282E-09 2 50198 61.181 61.181 1 1.5055 1.2002 0 9621700 4011900 5609800 3557 809 1304 1342 5621;5622 5621 AVAVDSTGTYMATSGLDHQLK 21 1 0 Unmodified _AVAVDSTGTYMATSGLDHQLK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.3612 3 722.356288 2164.04703 72180.13 0.5435 0.0003926 -0.86423 -0.00062428 -0.32073 -0.00023168 722.356163261975 725.02757148017 90.418 0.51495 90.418 90.174 90.689 -7.6294E-06 182 32 9 0 0 0 1.5523E-05 2 49294 35.834 35.834 1 1.3389 1.0912 0 6634900 2944400 3690500 3558 809 1304 1342 5623;5624 5623 AVCMLSNTTAIAEAWAR 17 0 1 Oxidation (M) _AVCM(ox)LSNTTAIAEAWAR_ AVCM(1)LSNTTAIAEAWAR AVCM(111.94)LSNTTAIAEAWAR 0 1 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q15670;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 941.4548 2 940.953303 1879.89205 NaN NaN NaN -0.85623 -0.00080568 NaN NaN NaN NaN 100.97 1.3245 100.97 100.39 101.71 -7.6294E-06 0 0 0 1.3182E-13 2 62106 111.94 105.7 1 NaN NaN 0 16022000 16022000 0 3559 922;1659;1869 1305 1343 5625;5626 5625 755 AVCMLSNTTAIAEAWAR 17 0 1 Unmodified _AVCMLSNTTAIAEAWAR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q15670;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 938.4617 2 932.955846 1863.89714 63778.5 0.85613 0.00079873 -0.21938 -0.00020467 0.63674 0.00059405 933.457051376401 938.461560474052 125.66 0.7957 125.66 125.14 125.94 -7.6294E-06 90 31 6 0 0 0 3.7001E-05 2 75414 80.312 74.818 1 1.4184 1.2078 0 5455800 2465900 2989900 3560 922;1659;1869 1305 1344 5627;5628 5627 AVCMLSNTTAIAEAWAR 17 0 1 Unmodified _AVCMLSNTTAIAEAWAR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q15670;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 937.962 2 932.955846 1863.89714 64005.48 0.7056 0.0006583 -0.42114 -0.00039291 0.28446 0.00026539 933.456717797336 937.959723769022 125.48 0.72752 125.48 125.03 125.76 0 109 31 7 0 0 0 0.0018718 1 74385 37.793 32.81 1 1.2092 1.0142 0 4865000 2126400 2738500 3561 922;1659;1869 1305 1344 5629 5629 AVCMLSNTTAVAEAWAR 17 0 1 Oxidation (M) _AVCM(ox)LSNTTAVAEAWAR_ AVCM(1)LSNTTAVAEAWAR AVCM(73.47)LSNTTAVAEAWAR 0 1 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532 Q53GA7 Q53GA7 TUBA1C Tubulin alpha-1C chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 933.9465 2 933.945478 1865.8764 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.003 1 92.003 91.503 92.503 0 0 0 0 0.00013311 1 55752 73.466 60.486 1 3562 1257 1306 1345 5630 5630 961 AVCMLSNTTAVAEAWAR 17 0 1 Oxidation (M) _AVCM(ox)LSNTTAVAEAWAR_ AVCM(1)LSNTTAVAEAWAR AVCM(82.85)LSNTTAVAEAWAR 0 1 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532 Q53GA7 Q53GA7 TUBA1C Tubulin alpha-1C chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 933.945 2 933.945478 1865.8764 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.258 1 92.258 91.758 92.758 -7.6294E-06 0 0 0 2.323E-05 1 55906 82.85 72.24 1 3563 1257 1306 1345 5631 5631 961 AVCMLSNTTAVAEAWAR 17 0 1 Oxidation (M) _AVCM(ox)LSNTTAVAEAWAR_ AVCM(1)LSNTTAVAEAWAR AVCM(134.99)LSNTTAVAEAWAR 0 1 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532 Q53GA7 Q53GA7 TUBA1C Tubulin alpha-1C chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 938.952 2 933.945478 1865.8764 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.61 1 92.61 92.11 93.11 0 0 0 0 5.3595E-27 1 56124 134.99 114.21 1 3564 1257 1306 1345 5632 5632 961 AVCMLSNTTAVAEAWAR 17 0 1 Oxidation (M) _AVCM(ox)LSNTTAVAEAWAR_ AVCM(1)LSNTTAVAEAWAR AVCM(56.96)LSNTTAVAEAWAR 0 1 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532 Q53GA7 Q53GA7 TUBA1C Tubulin alpha-1C chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 938.9501 2 933.945478 1865.8764 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.697 1 92.697 92.197 93.197 7.6294E-06 0 0 0 0.00039769 1 56178 56.956 50.514 1 3565 1257 1306 1345 5633 5633 961 AVCMLSNTTAVAEAWAR 17 0 1 Oxidation (M) _AVCM(ox)LSNTTAVAEAWAR_ AVCM(1)LSNTTAVAEAWAR AVCM(122.33)LSNTTAVAEAWAR 0 1 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532 Q53GA7 Q53GA7 TUBA1C Tubulin alpha-1C chain ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 934.443 2 933.945478 1865.8764 NaN NaN NaN -2.2764 -0.002126 NaN NaN NaN NaN 91.495 0.43437 91.495 91.242 91.676 0 0 0 0 2.862E-19 3 56652 122.33 106.95 1 NaN NaN 0 11298000 11298000 0 3566 1257 1306 1345 5634;5635;5636 5636 961 AVCMLSNTTAVAEAWAR 17 0 1 Oxidation (M) _AVCM(ox)LSNTTAVAEAWAR_ AVCM(1)LSNTTAVAEAWAR AVCM(71.81)LSNTTAVAEAWAR 0 1 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532 Q53GA7 Q53GA7 TUBA1C Tubulin alpha-1C chain ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 933.9456 2 933.945478 1865.8764 NaN NaN NaN 0.18163 0.00016964 NaN NaN NaN NaN 91.847 0.19305 91.847 91.786 91.979 0 0 0 0 2.3327E-05 1 56919 71.806 63.895 1 NaN NaN 0 6780100 6780100 0 3567 1257 1306 1345 5637 5637 961 AVDALLTHCK 10 1 0 Unmodified _AVDALLTHCK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L1A3 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.2054 3 376.534103 1126.58048 95604.32 0.4654 0.00017524 -0.15195 -5.7214E-05 0.31345 0.00011803 376.53407934399 379.205466137657 38.045 0.70675 38.045 37.749 38.456 0 302 58 7 0 0 0 0.011107 1 19361 33.088 29.556 1 0.56921 0.64332 0 143250000 94019000 49235000 3568 1415 1307 1346 5638 5638 AVDALLTHCK 10 1 0 Unmodified _AVDALLTHCK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L1A3 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.2979 2 564.297516 1126.58048 79409.84 0.98293 0.00055467 -0.082833 -4.6742E-05 0.9001 0.00050792 564.297602112785 568.304416346606 38.044 0.72359 38.044 37.707 38.431 0 364 60 8 0 0 0 4.0841E-12 1 19402 145.72 129.18 1 0.63402 0.73454 0 236380000 145460000 90928000 3569 1415 1307 1346 5639 5639 AVDALLTHCK 10 1 0 Unmodified _AVDALLTHCK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L1A3 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.306 2 564.297516 1126.58048 79005.67 0.54996 0.00031034 -0.50312 -0.00028391 0.046834 2.6428E-05 564.297247439223 568.304319020609 36.797 0.71117 36.797 36.446 37.157 0 371 54 11 0 0 0 1.0331E-09 2 18844 133.57 122.59 1 0.60532 0.71243 0 408050000 258220000 149820000 3570 1415 1307 1346 5640;5641 5641 AVDALLTHCK 10 1 0 Unmodified _AVDALLTHCK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L1A3 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.2057 3 376.534103 1126.58048 96469.14 0.072989 2.7483E-05 -0.23417 -8.8173E-05 -0.16118 -6.0691E-05 376.534005510807 379.205457752655 36.804 0.69662 36.804 36.461 37.157 0 245 53 7 0 0 0 0.0037896 2 18896 41.164 34.504 1 0.52424 0.60675 0 206040000 123810000 82226000 3571 1415 1307 1346 5642;5643 5643 AVDALLTHCK 10 1 0 Unmodified _AVDALLTHCK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L1A3 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.2974 2 564.297516 1126.58048 78841.26 0.55219 0.0003116 -0.13884 -7.8348E-05 0.41335 0.00023325 564.297502166646 568.304556692799 42.733 1.5032 42.733 42.359 43.862 0 447 101 8 0 0 0 1.5325E-09 2 19928 131.44 122.23 1 0.74548 0.62641 0 53562000 31587000 21975000 3572 1415 1307 1346 5644;5645 5644 AVDALLTHCK 10 1 0 Unmodified _AVDALLTHCK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L1A3 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 376.5342 3 376.534103 1126.58048 93241.1 0.10918 4.1111E-05 -0.24167 -9.0998E-05 -0.13249 -4.9887E-05 376.534032453599 379.20535892824 42.746 0.94558 42.746 42.382 43.328 0 325 62 8 0 0 0 0.022551 1 19960 26.786 19.898 1 0.68988 0.54995 0 19853000 11727000 8125200 3573 1415 1307 1346 5646 5646 AVDDGVNTFK 10 1 0 Unmodified _AVDDGVNTFK_ 0 0 0 Q7Z759;Q53HU0;P50990 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.2711 2 533.264196 1064.51384 85645.53 0.51466 0.00027445 -0.45692 -0.00024366 0.057742 3.0792E-05 533.264068485347 537.270968208736 39.202 0.49822 39.202 39.021 39.519 0 127 43 6 0 0 0 1.2241E-05 1 20741 103.55 74.397 1 4.294 4.7653 0 48671000 10729000 37942000 3574 1592 1308 1347 5647 5647 AVDEAADALLK 11 1 0 Unmodified _AVDEAADALLK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20;Q05DN3 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.308 2 558.300778 1114.587 81206.86 0.80673 0.0004504 0.24862 0.0001388 1.0553 0.0005892 558.30069582307 562.307830628007 71.852 0.7605 71.852 71.641 72.402 0 216 62 5 0 0 0 2.7317E-05 1 41926 102.07 72.918 1 0.87118 0.98788 0 94371000 46615000 47756000 3575 1774;1029;1128 1309 1348 5648 5648 AVDEAADALLK 11 1 0 Unmodified _AVDEAADALLK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20;Q05DN3 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.3082 2 558.300778 1114.587 NaN NaN NaN -0.096641 -5.3955E-05 NaN NaN NaN NaN 70.616 0.74141 70.616 70.442 71.183 0 0 0 0 7.1644E-08 1 42135 108.43 52.757 1 NaN NaN 0 30868000 0 30868000 3576 1774;1029;1128 1309 1348 5649 5649 AVDFAER 7 0 1 Unmodified _AVDFAER_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 404.2036 2 404.20341 806.392267 92933.39 0.38475 0.00015552 -0.13921 -5.627E-05 0.24554 9.9247E-05 404.203308107203 409.207413878971 30.287 0.54061 30.287 30.091 30.631 0 269 46 11 0 0 0 0.027041 2 14719 86.086 66.392 1 0.82583 0.98085 0 919990000 497840000 422150000 3577 1653 1310 1349 5650;5651 5651 AVDFAER 7 0 1 Unmodified _AVDFAER_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 409.2075 2 404.20341 806.392267 92994.98 0.1413 5.7113E-05 0.014057 5.6817E-06 0.15535 6.2795E-05 404.203334496822 409.207455715002 33.965 0.62991 33.965 33.778 34.407 0 254 56 8 0 0 0 0.041633 2 14918 58.917 43.91 1 0.92782 0.80362 0 149300000 78380000 70920000 3578 1653 1310 1349 5652;5653 5653 AVDFAER 7 0 1 Unmodified _AVDFAER_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 404.2037 2 404.20341 806.392267 94277.29 -0.13751 -5.5581E-05 0.22532 9.1077E-05 0.087817 3.5496E-05 404.20340140689 409.207543948665 34.049 0.68825 34.049 33.848 34.536 0 250 56 8 0 0 0 0.028834 2 14475 71.296 49.593 1 0.87184 0.76108 0 104740000 55030000 49714000 3579 1653 1310 1349 5654;5655 5655 AVDIPHMDIEALK 13 1 0 Oxidation (M) _AVDIPHM(ox)DIEALK_ AVDIPHM(1)DIEALK AVDIPHM(57.79)DIEALK 0 1 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3861 2 734.379234 1466.74392 70471.09 0.50666 0.00037208 0.4826 0.00035441 0.98926 0.00072649 734.379766812809 738.386684360675 72.668 0.70143 72.668 72.319 73.02 0 254 51 6 0 0 0 0.0007019 2 42425 57.785 43.106 1 1.4453 1.5621 0 36555000 16390000 20166000 3580 1651 1311 1350 5656;5657 5656 1429 AVDIPHMDIEALK 13 1 0 Oxidation (M) _AVDIPHM(ox)DIEALK_ AVDIPHM(1)DIEALK AVDIPHM(120.06)DIEALK 0 1 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3869 2 734.379234 1466.74392 71440.19 0.43826 0.00032185 0.056806 4.1717E-05 0.49507 0.00036357 734.3794794451 738.386466142105 71.275 0.67003 71.275 70.973 71.643 0 236 48 6 0 0 0 2.4887E-09 2 42692 120.06 88.933 1 1.4485 1.4783 0 31291000 13625000 17667000 3581 1651 1311 1350 5658;5659 5658 1429 AVDIPHMDIEALK 13 1 0 Unmodified _AVDIPHMDIEALK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.5904 3 484.590277 1450.749 87647.12 0.20926 0.0001014 -0.15183 -7.3576E-05 0.057426 2.7828E-05 484.924676739549 487.59593410627 97.483 0.77496 97.483 97.023 97.798 0 267 68 7 0 0 0 0.0029065 2 59420 31.827 31.827 1 0.59853 0.61859 0 29139000 19529000 9610100 3582 1651 1311 1351 5660;5661 5660 AVDIPHMDIEALK 13 1 0 Unmodified _AVDIPHMDIEALK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.2619 3 484.590277 1450.749 87167.25 0.39167 0.0001898 0.0086697 4.2013E-06 0.40034 0.000194 484.590219065189 487.261840349247 96.349 0.77871 96.349 96.064 96.842 -7.6294E-06 288 67 7 0 0 0 0.0099432 2 60128 31.071 31.071 1 0.67029 0.69698 0 33726000 21512000 12214000 3583 1651 1311 1351 5662;5663 5663 AVDIPHMDIEALK 13 1 0 Unmodified _AVDIPHMDIEALK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.2621 3 484.590277 1450.749 86604.15 0.33623 0.00016293 -0.28526 -0.00013823 0.050971 2.47E-05 484.590237433141 487.261630742661 109.96 0.56843 109.96 109.7 110.26 7.6294E-06 158 29 8 0 0 0 0.01102 1 63411 24.415 24.415 1 1.286 1.0058 0 16334000 7563300 8770400 3584 1651 1311 1351 5664 5664 AVDIPHMDIEALK 13 1 0 Unmodified _AVDIPHMDIEALK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.262 3 484.590277 1450.749 85442.42 0.49183 0.00023833 -0.38409 -0.00018613 0.10774 5.2209E-05 484.59014219856 487.261624179788 109.77 0.42269 109.77 109.59 110.02 0 139 21 8 0 0 0 0.0088337 2 62370 23.956 23.956 1 1.1635 0.95981 0 11096000 5165500 5930800 3585 1651 1311 1351 5665;5666 5665 AVDIPHMDIEALK 13 1 0 Unmodified _AVDIPHMDIEALK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 726.383 2 726.381777 1450.749 72053.79 0.82675 0.00060053 -0.64265 -0.00046681 0.18409 0.00013372 726.381723017121 730.388955516963 109.8 0.351 109.8 109.61 109.96 7.6294E-06 61 17 5 0 0 0 0.005864 1 62435 46.844 27.573 1 1.408 1.1496 0 4704600 2050400 2654200 3586 1651 1311 1351 5667 5667 AVDITTPK 8 1 0 Unmodified _AVDITTPK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.7423 2 422.742368 843.470183 93988.14 0.35165 0.00014866 0.088832 3.7553E-05 0.44048 0.00018621 422.742286489449 426.74952195764 34.457 0.65845 34.457 34.161 34.82 0 211 51 6 0 0 0 0.0395 1 17427 47.574 23.717 1 0.69965 0.78227 0 86693000 52689000 34004000 3587 1405 1312 1352 5668 5668 AVDPEDDFQR 10 0 1 Unmodified _AVDPEDDFQR_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.2719 2 596.267467 1190.52038 79885.91 0.77908 0.00046454 0.031757 1.8936E-05 0.81083 0.00048347 596.267387519654 601.271565452841 42.493 0.98972 42.493 42.178 43.167 0 468 77 8 0 0 0 5.4663E-08 1 22486 114.89 106.03 1 0.89841 1.0636 0 372170000 201540000 170630000 3588 1316 1313 1353 5669 5669 AVDPEDDFQR 10 0 1 Unmodified _AVDPEDDFQR_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.2714 2 596.267467 1190.52038 79451.98 0.69133 0.00041222 -0.055609 -3.3158E-05 0.63572 0.00037906 596.26734544325 601.271522359265 41.971 1.0062 41.971 41.453 42.459 0 543 88 8 0 0 0 0.00035656 2 22361 88.948 88.948 1 0.85609 0.99312 0 321190000 174010000 147180000 3589 1316 1313 1353 5670;5671 5670 AVDPEDDFQR 10 0 1 Unmodified _AVDPEDDFQR_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.2709 2 596.267467 1190.52038 79019.05 0.39914 0.00023799 0.32588 0.00019431 0.72502 0.00043231 596.267591271921 601.271717099413 49.299 1.1013 49.299 48.905 50.007 -3.8147E-06 480 90 9 0 0 0 0.00021583 2 23969 93.551 93.551 1 0.98208 0.84551 0 56548000 28965000 27584000 3590 1316 1313 1353 5672;5673 5673 AVDPEDDFQR 10 0 1 Unmodified _AVDPEDDFQR_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.2718 2 596.267467 1190.52038 79390.22 0.30753 0.00018337 0.44783 0.00026703 0.75536 0.0004504 596.267717917107 601.271760516643 49.725 1.0138 49.725 49.343 50.357 0 480 80 9 0 0 0 1.4776E-05 2 23655 101.64 97.709 1 0.99129 0.86494 0 58600000 29483000 29117000 3591 1316 1313 1353 5674;5675 5674 AVDPGLPSVK 10 1 0 Unmodified _AVDPGLPSVK_ 0 0 0 A0A0A0MS90;A8K654;B4DI41;Q9UIS9;K7EN65 A0A0A0MS90 A0A0A0MS90 MBD1 Methyl-CpG-binding domain protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.7892 2 491.782025 981.549496 89146.19 0.24053 0.00011829 0.0033689 1.6568E-06 0.2439 0.00011995 491.78218095027 495.789098633444 67.454 0.61373 67.454 67.16 67.773 0 130 46 4 0 0 0 0.04172 1 35098 38.086 38.086 1 1.9025 1.6306 0 1127500 426330 701140 3592 477 1314 1354 5676 5676 AVDPSSVALVTLGSSK 16 1 0 Unmodified _AVDPSSVALVTLGSSK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.9225 2 765.92232 1529.83009 70121.11 0.83816 0.00064197 0.36972 0.00028318 1.2079 0.00092514 765.922278610143 769.929618024985 99.987 0.58057 99.987 99.654 100.23 0 151 49 7 0 0 0 3.1971E-06 1 61175 89.959 89.959 1 1.0378 1.0603 0 28282000 13985000 14297000 3593 1937 1315 1355 5677 5677 AVDPSSVALVTLGSSK 16 1 0 Unmodified _AVDPSSVALVTLGSSK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.9229 2 765.92232 1529.83009 69687.7 0.93031 0.00071255 -0.28323 -0.00021693 0.64708 0.00049562 765.922061890952 769.92901801099 112.49 0.4118 112.49 112.27 112.68 0 96 22 6 0 0 0 0.00015558 2 65422 72.891 72.891 1 0.78294 0.60776 0 3456700 2025600 1431100 3594 1937 1315 1355 5678;5679 5678 AVDPSSVALVTLGSSK 16 1 0 Unmodified _AVDPSSVALVTLGSSK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.9222 2 765.92232 1529.83009 NaN NaN NaN -0.42753 -0.00032745 NaN NaN NaN NaN 112.38 0.3765 112.38 112.2 112.58 0 0 0 0 0.013231 1 64358 44.511 34.139 1 NaN NaN 0 2151100 2151100 0 3595 1937 1315 1355 5680 5680 AVDPTSGQLYGLAR 14 0 1 Unmodified _AVDPTSGQLYGLAR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.3804 2 724.380623 1446.74669 NaN NaN NaN -0.61538 -0.00044577 NaN NaN NaN NaN 78.483 0.51476 78.483 78.243 78.757 7.6294E-06 0 0 0 0.002192 1 47555 80.763 42.677 1 NaN NaN 0 11691000 11691000 0 3596 1937 1316 1356 5681 5681 AVDPTSGQLYGLAR 14 0 1 Unmodified _AVDPTSGQLYGLAR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.3816 2 724.380623 1446.74669 NaN NaN NaN -0.77958 -0.00056471 NaN NaN NaN NaN 90.79 0.38409 90.79 90.533 90.917 0 0 0 0 0.017562 1 49497 57.836 32.45 1 NaN NaN 0 1311100 1311100 0 3597 1937 1316 1356 5682 5682 AVDQHNAEAQDIFGK 15 1 0 Unmodified _AVDQHNAEAQDIFGK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.9373 3 548.265509 1641.7747 82413.49 0.76137 0.00041743 -0.045966 -2.5201E-05 0.7154 0.00039223 548.265609058136 550.936784418577 46.559 0.52742 46.559 46.301 46.828 -3.8147E-06 187 44 7 0 0 0 6.7633E-05 2 25127 63.543 63.543 1 2.3194 2.356 0 27855000 8796800 19058000 3598 1602 1317 1357 5683;5684 5683 AVDQHNAEAQDIFGK 15 1 0 Unmodified _AVDQHNAEAQDIFGK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.8941 2 821.894626 1641.7747 68544.84 0.85921 0.00070618 -0.25404 -0.0002088 0.60517 0.00049738 821.893965746466 825.901454954266 46.582 0.30547 46.582 46.379 46.684 0 55 24 4 0 0 0 0.00036189 1 25210 59.116 45.307 1 2.7611 2.744 0 8080400 2370100 5710300 3599 1602 1317 1357 5685 5685 AVDQHNAEAQDIFGK 15 1 0 Unmodified _AVDQHNAEAQDIFGK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 825.9012 2 821.894626 1641.7747 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.435 1 46.435 45.935 46.935 -3.8147E-06 0 0 0 0.0012327 1 25083 58.172 44.363 1 3600 1602 1317 1357 5686 5686 AVDQHNAEAQDIFGK 15 1 0 Unmodified _AVDQHNAEAQDIFGK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 825.9042 2 821.894626 1641.7747 NaN NaN NaN -0.079215 -6.5106E-05 NaN NaN NaN NaN 45.227 0.22187 45.227 45.111 45.333 0 0 0 0 5.3951E-06 1 24746 92.151 76.612 1 NaN NaN 0 7368500 0 7368500 3601 1602 1317 1357 5687 5687 AVDQHNAEAQDIFGK 15 1 0 Unmodified _AVDQHNAEAQDIFGK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.8949 2 821.894626 1641.7747 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.247 1 45.247 44.747 45.747 0 0 0 0 0.0016251 1 24805 69.345 53.455 1 3602 1602 1317 1357 5688 5688 AVDSLVPIGR 10 0 1 Unmodified _AVDSLVPIGR_ 0 0 0 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7ENJ4 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.8054 2 513.800749 1025.58694 87416.02 0.66574 0.00034206 0.48416 0.00024876 1.1499 0.00059082 513.80041724011 519.307215030192 79.637 0.65319 79.637 79.324 79.978 0 156 55 5 0 0 0 0.00089646 1 47170 79.474 46.211 1 1.396 1.4641 0 12178000 4713000 7465500 3603 1518 1318 1358 5689 5689 AVDSQILPK 9 1 0 Unmodified _AVDSQILPK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.7836 2 485.782025 969.549496 86199.84 0.26127 0.00012692 0.71 0.0003449 0.97126 0.00047182 485.782239780334 489.789432883067 51.398 0.61155 51.398 50.923 51.534 3.8147E-06 296 56 8 0 0 0 0.0091127 2 28251 60.478 39.779 1 0.98819 1.1793 0 734920000 370030000 364880000 3604 342 1319 1359 5690;5691 5690 AVDSQILPK 9 1 0 Unmodified _AVDSQILPK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.785 2 485.782025 969.549496 86897.93 0.36697 0.00017827 -0.31509 -0.00015307 0.051875 2.52E-05 485.781901968444 489.788855453702 50.153 1.1486 50.153 49.728 50.876 -3.8147E-06 597 101 10 0 0 0 0.0018358 3 28511 80.229 48.294 1 0.95509 1.1257 0 621900000 295200000 326710000 3605 342 1319 1359 5692;5693;5694 5694 AVDSQILPK 9 1 0 Unmodified _AVDSQILPK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.7894 2 485.782025 969.549496 85907.67 0.10074 4.8936E-05 0.07446 3.6171E-05 0.1752 8.5107E-05 485.782050202185 489.788981362827 58.913 1.2627 58.913 58.353 59.616 0 568 98 9 0 0 0 0.00033401 2 29882 101.72 60.219 1 0.83108 0.69269 0 48280000 26278000 22002000 3606 342 1319 1359 5695;5696 5696 AVDSQILPK 9 1 0 Unmodified _AVDSQILPK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.7889 2 485.782025 969.549496 85366.27 0.2102 0.00010211 0.11818 5.7411E-05 0.32838 0.00015952 485.782040563006 489.789039875687 59.308 1.4332 59.308 58.779 60.212 0 610 111 8 0 0 0 0.0030108 2 29451 72.879 41.59 1 0.81237 0.67562 0 38444000 20654000 17790000 3607 342 1319 1359 5697;5698 5697 AVDTLAYLSDGDAR 14 0 1 Unmodified _AVDTLAYLSDGDAR_ 0 0 0 Q96S55;B3KT25 Q96S55 Q96S55 WRNIP1 ATPase WRNIP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.86 2 733.85972 1465.70489 74610.34 0.84124 0.00061735 0.1956 0.00014355 1.0368 0.0007609 733.859608540623 739.365644142165 95.885 0.45499 95.885 95.674 96.129 0 88 30 5 0 0 0 0.045486 1 53808 26.753 26.753 1 0.66465 0.58028 0 1876800 1063400 813470 3608 1987 1320 1360 5699 5699 AVDVGAFLR 9 0 1 Unmodified _AVDVGAFLR_ 0 0 0 H3BTR4;B3KPB2;Q96BT3;H3BUW2;A8K662;B4DMP9 H3BTR4 H3BTR4 CENPT Centromere protein T ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.269 2 474.269084 946.523616 NaN NaN NaN 0.42629 0.00020218 NaN NaN NaN NaN 91.536 0.40282 91.536 91.254 91.656 0 0 0 0 0.019957 1 56556 58.917 38.358 1 NaN NaN 0 8769300 8769300 0 3609 920 1321 1361 5700 5700 AVEEGLTYK 9 1 0 Unmodified _AVEEGLTYK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.2707 2 505.263665 1008.51278 NaN NaN NaN 0.20429 0.00010322 NaN NaN NaN NaN 37.523 0.85759 37.523 37.025 37.882 0 0 0 0 0.014028 1 19166 63.565 32.276 1 NaN NaN 0 16377000 0 16377000 3610 907 1322 1362 5701 5701 AVEEGLTYK 9 1 0 Unmodified _AVEEGLTYK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2712 2 505.263665 1008.51278 87140.65 0.30836 0.0001558 -0.68648 -0.00034685 -0.37812 -0.00019105 505.263523199942 509.270701542792 36.812 0.74837 36.812 36.421 37.169 0 160 57 10 0 0 0 0.0074258 1 18944 61.999 35.397 1 1.2119 1.3333 0 42525000 19682000 22842000 3611 907 1322 1362 5702 5702 AVEEGLTYK 9 1 0 Unmodified _AVEEGLTYK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.2715 2 505.263665 1008.51278 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.979 1 42.979 42.479 43.479 0 0 0 0 0.030931 1 20185 52.716 4.8675 1 3612 907 1322 1362 5703 5703 AVEEGLTYK 9 1 0 Unmodified _AVEEGLTYK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.2714 2 505.263665 1008.51278 83964.27 0.12294 6.2118E-05 0.16228 8.1993E-05 0.28522 0.00014411 505.263908513923 509.270916130146 43.184 0.88102 43.184 42.851 43.732 0 215 56 6 0 0 0 0.0066845 1 19700 63.565 38.642 1 1.6136 1.3124 0 4518200 1847700 2670500 3613 907 1322 1362 5704 5704 AVEIVTSTSAAK 12 1 0 Unmodified _AVEIVTSTSAAK_ 0 0 0 Q14966;D6W5H1;A8K583;B4E187 Q14966 Q14966 ZNF638 Zinc finger protein 638 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8346 2 588.82716 1175.63977 79539.3 0.74338 0.00043772 -0.78628 -0.00046298 -0.042897 -2.5259E-05 588.827006520379 592.834179464669 41.773 0.45557 41.773 41.501 41.957 3.8147E-06 123 37 5 0 0 0 0.005312 1 21970 51.268 36.117 1 0.64008 0.65517 0 17698000 9869400 7828500 3614 1746 1323 1363 5705 5705 AVEIVTSTSAAK 12 1 0 Unmodified _AVEIVTSTSAAK_ 0 0 0 Q14966;D6W5H1;A8K583;B4E187 Q14966 Q14966 ZNF638 Zinc finger protein 638 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.8347 2 588.82716 1175.63977 NaN NaN NaN -0.18121 -0.0001067 NaN NaN NaN NaN 40.519 0.4054 40.519 40.364 40.769 0 0 0 0 0.0069371 1 21707 59.426 43.223 1 NaN NaN 0 10658000 0 10658000 3615 1746 1323 1363 5706 5706 AVEIVTSTSAAK 12 1 0 Unmodified _AVEIVTSTSAAK_ 0 0 0 Q14966;D6W5H1;A8K583;B4E187 Q14966 Q14966 ZNF638 Zinc finger protein 638 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.8275 2 588.82716 1175.63977 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.447 1 40.447 39.947 40.947 0 0 0 0 0.00056919 1 21589 78.655 30.372 1 3616 1746 1323 1363 5707 5707 AVELASLQNAK 11 1 0 Unmodified _AVELASLQNAK_ 0 0 0 A0A1C7CYX1;A0A0A0MSU2;A0PJD3;A0A024R689;Q6PJG2;H7C1L3 A0A1C7CYX1 A0A1C7CYX1 ELMSAN1;C14orf43 ELM2 and SANT domain-containing protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.3292 2 572.322045 1142.62954 NaN NaN NaN 0.50562 0.00028938 NaN NaN NaN NaN 66.416 0.33862 66.416 66.258 66.597 0 0 0 0 0.046979 1 34512 45.161 28.385 1 NaN NaN 0 625330 0 625330 3617 638 1324 1364 5708 5708 AVESGQLVSVHEK 13 1 0 Unmodified _AVESGQLVSVHEK_ 0 0 0 Q9BRU9 Q9BRU9 Q9BRU9 UTP23 rRNA-processing protein UTP23 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.3686 2 691.867348 1381.72014 NaN NaN NaN 0.021102 1.4599E-05 NaN NaN NaN NaN 32.845 0.33467 32.845 32.595 32.93 0 0 0 0 0.0023745 1 16288 69.979 45.204 1 NaN NaN 0 5788600 5788600 0 3618 1999 1325 1365 5709 5709 AVESGQLVSVHEK 13 1 0 Unmodified _AVESGQLVSVHEK_ 0 0 0 Q9BRU9 Q9BRU9 Q9BRU9 UTP23 rRNA-processing protein UTP23 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.8666 2 691.867348 1381.72014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.091 1 32.091 31.591 32.591 0 0 0 0 0.00014341 1 15950 92.247 49.503 1 3619 1999 1325 1365 5710 5710 AVESGQLVSVHEK 13 1 0 Unmodified _AVESGQLVSVHEK_ 0 0 0 Q9BRU9 Q9BRU9 Q9BRU9 UTP23 rRNA-processing protein UTP23 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.2519 3 461.580658 1381.72014 87619.08 0.26934 0.00012432 -0.46068 -0.00021264 -0.19135 -8.8323E-05 461.580484723358 464.25179066599 37.691 0.45564 37.691 37.509 37.965 0 161 35 8 0 0 0 0.051501 1 16976 18.413 18.413 1 0.98081 0.77256 0 5684100 2755300 2928900 3620 1999 1325 1365 5711 5711 AVESGVPQPPDPPVQRDEEEEK 22 1 1 Unmodified _AVESGVPQPPDPPVQRDEEEEK_ 0 0 1 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.7256 3 811.390714 2431.15031 67816.03 0.66976 0.00054344 0.29049 0.0002357 0.96026 0.00077915 811.725062860141 817.398418767667 67.006 0.83457 67.006 66.521 67.355 0 189 56 7 0 0 0 0.056478 1 34907 13.188 13.188 1 2.3833 2.0844 0 2423300 709640 1713700 3621 2094 1326 1366 5712 5712 AVESGVPQPPDPPVQRDEEEEK 22 1 1 Unmodified _AVESGVPQPPDPPVQRDEEEEK_ 0 0 1 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 817.3996 3 811.390714 2431.15031 68301.18 0.54328 0.00044082 0.26321 0.00021357 0.8065 0.00065438 811.724973034834 817.732561500915 67.689 0.66975 67.689 67.249 67.918 7.6294E-06 202 44 7 0 0 0 0.057112 1 34325 13.057 13.057 1 2.282 1.9682 0 2021500 885680 1135800 3622 2094 1326 1366 5713 5713 AVESIQAEDESAK 13 1 0 Unmodified _AVESIQAEDESAK_ 0 0 0 D6RID6;D6RDW4;D6REW7;D3DVP6;D6RIB6;D3DVP3;B4DQT1;B4DUB2;D3DVP1;B4DVN3;E7ESC7;Q7L5Y9 D6RID6 D6RID6 MAEA Macrophage erythroblast attacher ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3419 2 688.830628 1375.6467 NaN NaN NaN 1.4318 0.00098628 NaN NaN NaN NaN 28.449 0.092188 28.449 28.406 28.498 0 0 0 0 0.0057449 1 13453 56.548 27.461 1 NaN NaN 0 1904000 0 1904000 3623 1025 1327 1367 5714 5714 AVETLQAGQDGPGSQVDTLLR 21 0 1 Unmodified _AVETLQAGQDGPGSQVDTLLR_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1078.5541 2 1078.05311 2154.09168 59427.04 0.11315 0.00012198 -0.013301 -1.434E-05 0.09985 0.00010764 1078.55469569251 1083.558624587 97.187 0.56697 97.187 96.857 97.424 0 239 51 7 0 0 0 1.4423E-46 2 59114 151.56 151.56 1 1.0585 1.0828 0 33880000 23714000 10166000 3624 1781 1328 1368 5715;5716 5715 AVETLQAGQDGPGSQVDTLLR 21 0 1 Unmodified _AVETLQAGQDGPGSQVDTLLR_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1078.5549 2 1078.05311 2154.09168 59487.77 0.40359 0.00043509 -0.28825 -0.00031075 0.11534 0.00012434 1078.55478990912 1083.0572519636 96.496 0.54601 96.496 96.267 96.813 0 233 47 6 0 0 0 1.21E-58 3 60068 170.11 170.11 1 0.91479 1.0018 0 32198000 16245000 15953000 3625 1781 1328 1368 5717;5718;5719 5717 AVETLQAGQDGPGSQVDTLLR 21 0 1 Unmodified _AVETLQAGQDGPGSQVDTLLR_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1083.5602 2 1078.05311 2154.09168 58488.54 0.23322 0.00025143 0.18139 0.00019555 0.41461 0.00044697 1078.55463613087 1083.55861687375 110.29 0.41051 110.29 110.12 110.53 0 171 21 11 0 0 0 7.5288E-07 2 63611 78.69 78.69 1 1.3003 1.0851 0 23229000 9688100 13541000 3626 1781 1328 1368 5720;5721 5720 AVETLQAGQDGPGSQVDTLLR 21 0 1 Unmodified _AVETLQAGQDGPGSQVDTLLR_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1078.5544 2 1078.05311 2154.09168 58271.06 0.23632 0.00025477 0.13522 0.00014577 0.37154 0.00040054 1078.554835264 1083.55859741233 110.18 0.48576 110.18 109.96 110.45 7.6294E-06 175 26 10 0 0 0 9.0182E-12 1 62640 98.676 98.676 1 1.31 1.1033 0 17470000 7840400 9629300 3627 1781 1328 1368 5722 5722 AVEVQGPSLESGDHGK 16 1 0 Unmodified _AVEVQGPSLESGDHGK_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.4032 2 805.394458 1608.77436 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.538 1 37.538 37.038 38.038 0 0 0 0 0.00077026 1 19127 58.781 33.395 1 3628 1696 1329 1369 5723 5723 AVEVQGPSLESGDHGK 16 1 0 Unmodified _AVEVQGPSLESGDHGK_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.4015 2 805.394458 1608.77436 69107.41 0.86767 0.00069881 0.11161 8.9894E-05 0.97928 0.00078871 805.895857658543 809.40192543591 36.405 0.30757 36.405 36.218 36.525 0 59 26 4 0 0 0 1.0548E-06 1 18669 113.99 113.99 1 1.8635 1.8965 0 30518000 8984700 21533000 3629 1696 1329 1369 5724 5724 AVEYLLMGIPGDR 13 0 1 Oxidation (M) _AVEYLLM(ox)GIPGDR_ AVEYLLM(1)GIPGDR AVEYLLM(95.4)GIPGDR 0 1 0 P54727;B4DEA3;B7Z4W4;B7ZA74 P54727 P54727 RAD23B UV excision repair protein RAD23 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3793 2 725.373952 1448.73335 70928.59 0.7184 0.00052111 0.82462 0.00059815 1.543 0.0011193 725.373845972494 730.882536942956 99.895 0.80013 99.895 99.487 100.29 -7.6294E-06 247 62 5 0 0 0 3.1995E-05 2 62523 95.401 77.133 1 0.76763 0.79522 0 21813000 11495000 10318000 3630 1610 1330 1370 5725;5726 5725 1397 AVFDETYPDPVR 12 0 1 Unmodified _AVFDETYPDPVR_ 0 0 0 P49588;H3BPK7 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3477 2 704.840799 1407.66705 NaN NaN NaN 0.36105 0.00025448 NaN NaN NaN NaN 81.769 0.58361 81.769 81.512 82.096 0 0 0 0 0.0080786 1 48842 57.348 43.142 1 NaN NaN 0 16487000 0 16487000 3631 1583 1331 1371 5727 5727 AVFDETYPDPVR 12 0 1 Unmodified _AVFDETYPDPVR_ 0 0 0 P49588;H3BPK7 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.8455 2 704.840799 1407.66705 NaN NaN NaN 0.5258 0.00037061 NaN NaN NaN NaN 80.808 0.67429 80.808 80.542 81.216 0 0 0 0 0.00034875 1 49295 89.913 75.706 1 NaN NaN 0 11520000 0 11520000 3632 1583 1331 1371 5728 5728 AVFPLLYVR 9 0 1 Unmodified _AVFPLLYVR_ 0 0 0 B3KNM8;B4E2X3;C4B4C6;Q8N6R0 B3KNM8 B3KNM8 feat;METTL13 Methyltransferase-like protein 13 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.3307 2 539.326402 1076.63825 NaN NaN NaN 0.10297 5.5535E-05 NaN NaN NaN NaN 115.28 0.46918 115.28 115.01 115.48 0 0 0 0 0.015109 1 75126 62.717 53.477 1 NaN NaN 0 2011400 0 2011400 3633 915 1332 1372 5729 5729 AVFPLLYVR 9 0 1 Unmodified _AVFPLLYVR_ 0 0 0 B3KNM8;B4E2X3;C4B4C6;Q8N6R0 B3KNM8 B3KNM8 feat;METTL13 Methyltransferase-like protein 13 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.3262 2 539.326402 1076.63825 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.22 1 115.22 114.72 115.72 0 0 0 0 0.04604 1 75132 47.849 17.663 1 3634 915 1332 1372 5730 5730 AVFPSIVGR 9 0 1 Unmodified _AVFPSIVGR_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2796 2 473.279452 944.544351 86674.52 0.371 0.00017559 -0.11581 -5.4809E-05 0.25519 0.00012078 473.279876081474 478.28344748174 84.021 1.674 84.021 83.551 85.225 0 810 136 10 0 0 0 0.00096334 8 50141 91.9 63.568 1 1.8383 2.193 0 3116500000 1113000000 2003500000 3635 1624;1656;1100 1333 1373 5731;5732;5733;5734;5735;5736;5737;5738 5732 AVFPSIVGR 9 0 1 Unmodified _AVFPSIVGR_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2796 2 473.279452 944.544351 86690.21 0.06558 3.1038E-05 -0.056502 -2.6741E-05 0.0090782 4.2965E-06 473.279944741703 478.283493159777 82.767 1.3876 82.767 82.467 83.855 0 752 108 10 0 0 0 1.5452E-05 6 50585 122.13 91.46 1 1.8628 2.2151 0 2375800000 744780000 1631100000 3636 1624;1656;1100 1333 1373 5739;5740;5741;5742;5743;5744 5740 AVFPSIVGR 9 0 1 Unmodified _AVFPSIVGR_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.2795 2 473.279452 944.544351 87431.68 0.41072 0.00019438 -0.33972 -0.00016078 0.070996 3.3601E-05 473.279386496163 478.283358868327 95.59 1.4783 95.59 95.209 96.687 0 591 98 10 0 0 0 0.0074258 3 53484 61.999 42.522 1 2.544 2.2015 0 129780000 35775000 94003000 3637 1624;1656;1100 1333 1373 5745;5746;5747 5746 AVFPSIVGR 9 0 1 Unmodified _AVFPSIVGR_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.28 2 473.279452 944.544351 86766.24 0.23262 0.00011009 -0.28351 -0.00013418 -0.050892 -2.4086E-05 473.279381179317 478.283376435472 95.4 1.2994 95.4 95.044 96.344 0 506 89 9 0 0 0 2.1239E-05 3 52572 117.16 86.491 1 2.5887 2.2599 0 109880000 29058000 80822000 3638 1624;1656;1100 1333 1373 5748;5749;5750 5749 AVFPSIVGRPR 11 0 2 Unmodified _AVFPSIVGRPR_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.24 3 400.240018 1197.69823 92171.58 -0.0072711 -2.9102E-06 -0.5327 -0.00021321 -0.53997 -0.00021612 400.240177670276 406.912015294175 68.165 2.1249 68.165 67.793 69.918 0 1225 184 12 0 0 0 1.2724E-05 4 39401 101.97 101.97 1 2.0686 2.2738 0 1772400000 547880000 1224500000 3639 1624;1656;1100 1334 1374 5751;5752;5753;5754 5752 AVFPSIVGRPR 11 0 2 Unmodified _AVFPSIVGRPR_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.8652 2 599.85639 1197.69823 78366.13 0.5222 0.00031324 -0.0029825 -1.7891E-06 0.51921 0.00031145 599.856339697367 609.864524706536 68.158 1.4451 68.158 67.931 69.376 0 590 127 8 0 0 0 0.002573 1 39402 93.178 93.178 1 2.1152 2.312 0 279850000 80958000 198890000 3640 1624;1656;1100 1334 1374 5755 5755 AVFPSIVGRPR 11 0 2 Unmodified _AVFPSIVGRPR_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 406.9116 3 400.240018 1197.69823 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.117 1 70.117 69.617 70.617 0 0 0 0 0.041411 1 40775 39.785 14.931 1 3641 1624;1656;1100 1334 1374 5756 5756 AVFPSIVGRPR 11 0 2 Unmodified _AVFPSIVGRPR_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2398 3 400.240018 1197.69823 92225.13 0.087925 3.5191E-05 -0.87953 -0.00035202 -0.79161 -0.00031683 400.2400189568 406.911861723635 66.233 1.6535 66.233 65.87 67.523 0 977 138 11 0 0 0 0.00034176 4 38990 72.848 72.848 1 2.0061 2.5264 0 1991300000 659060000 1332200000 3642 1624;1656;1100 1334 1374 5757;5758;5759;5760 5758 AVFPSIVGRPR 11 0 2 Unmodified _AVFPSIVGRPR_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8566 2 599.85639 1197.69823 77597.92 0.53445 0.00032059 -0.3495 -0.00020965 0.18494 0.00011094 599.856019833732 609.864402553786 66.174 1.2133 66.174 65.926 67.139 0 478 103 8 0 0 0 2.6079E-07 2 39032 124.08 124.08 1 1.9972 2.3838 0 245200000 72546000 172650000 3643 1624;1656;1100 1334 1374 5761;5762 5762 AVFPSIVGRPR 11 0 2 Unmodified _AVFPSIVGRPR_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 400.2401 3 400.240018 1197.69823 91479.46 -0.1078 -4.3146E-05 -0.39043 -0.00015626 -0.49823 -0.00019941 400.240114720202 406.912107674691 77.135 2.4072 77.135 76.759 79.166 0 746 156 10 0 0 0 0.0024252 2 41174 56.548 56.548 1 2.9355 2.2756 0 270220000 65916000 204310000 3644 1624;1656;1100 1334 1374 5763;5764 5764 AVFPSIVGRPR 11 0 2 Unmodified _AVFPSIVGRPR_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 609.8648 2 599.85639 1197.69823 77455.62 0.33114 0.00019863 0.091404 5.4829E-05 0.42254 0.00025346 599.856335303139 609.864675827847 77.124 0.84753 77.124 76.86 77.708 0 352 57 9 0 0 0 0.0083451 1 41163 83.998 83.998 1 2.851 2.2988 0 59546000 14065000 45482000 3645 1624;1656;1100 1334 1374 5765 5765 AVFPSIVGRPR 11 0 2 Unmodified _AVFPSIVGRPR_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 400.2398 3 400.240018 1197.69823 91428.64 -0.13445 -5.3814E-05 -0.19383 -7.7578E-05 -0.32828 -0.00013139 400.240153185525 406.912196617949 77.171 1.8976 77.171 76.817 78.715 0 599 124 10 0 0 0 0.013051 2 40368 39.785 39.785 1 2.9183 2.8051 0 242890000 58158000 184740000 3646 1624;1656;1100 1334 1374 5766;5767 5767 AVFPSIVGRPR 11 0 2 Unmodified _AVFPSIVGRPR_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;F8WCH0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.8645 2 599.85639 1197.69823 76981.79 0.47869 0.00028715 -0.18067 -0.00010838 0.29802 0.00017877 599.856091393414 609.864539692946 77.116 0.97282 77.116 76.893 77.865 0 331 63 8 0 0 0 0.0016022 1 40356 105.52 105.52 1 2.8413 2.6716 0 58037000 13861000 44176000 3647 1624;1656;1100 1334 1374 5768 5768 AVFQESIR 8 0 1 Unmodified _AVFQESIR_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.2632 2 475.258717 948.50288 87810.05 0.29859 0.00014191 0.05312 2.5246E-05 0.35171 0.00016715 475.258707999021 480.262784769771 48.234 0.80226 48.234 47.883 48.685 0 235 64 5 0 0 0 0.031214 1 26219 51.43 31.943 1 1.4533 1.5769 0 49988000 21231000 28756000 3648 804 1335 1375 5769 5769 AVFVDLEPTVIDEIR 15 0 1 Unmodified _AVFVDLEPTVIDEIR_ 0 0 0 P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 P68366 P68366 TUBA4A Tubulin alpha-4A chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.4686 2 858.464352 1714.91415 NaN NaN NaN -0.12209 -0.00010481 NaN NaN NaN NaN 123.63 0.56963 123.63 123.33 123.9 0 0 0 0 9.7194E-23 1 80112 131.17 113.36 1 NaN NaN 0 50853000 0 50853000 3649 1659 1336 1376 5770 5770 AVFVDLEPTVIDEIR 15 0 1 Unmodified _AVFVDLEPTVIDEIR_ 0 0 0 P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 P68366 P68366 TUBA4A Tubulin alpha-4A chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 863.9699 2 858.464352 1714.91415 NaN NaN NaN -0.15571 -0.00013367 NaN NaN NaN NaN 123.21 0.68875 123.21 122.85 123.54 0 0 0 0 0.00023478 1 81690 76.927 54.241 1 NaN NaN 0 55331000 0 55331000 3650 1659 1336 1376 5771 5771 AVFVDLEPTVIDEIR 15 0 1 Unmodified _AVFVDLEPTVIDEIR_ 0 0 0 P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 P68366 P68366 TUBA4A Tubulin alpha-4A chain ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.4636 2 858.464352 1714.91415 NaN NaN NaN -0.16249 -0.00013949 NaN NaN NaN NaN 134.54 0.18549 134.54 134.44 134.63 0 0 0 0 0.010576 1 81314 50.562 33.195 1 NaN NaN 0 14661000 14661000 0 3651 1659 1336 1376 5772 5772 AVFVDLEPTVIDEVR 15 0 1 Unmodified _AVFVDLEPTVIDEVR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 851.4577 2 851.456527 1700.8985 67604.59 0.89062 0.00075833 -0.044088 -3.7539E-05 0.84653 0.00072079 851.456419227578 856.460645244773 115.97 0.31881 115.97 115.82 116.14 0 51 17 4 0 0 0 0.0002222 2 73974 67.153 67.153 1 1.5645 1.5929 0 7091700 2880000 4211700 3652 922;1257;1869 1337 1377 5773;5774 5774 AVFVDLEPTVIDEVR 15 0 1 Unmodified _AVFVDLEPTVIDEVR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 856.4615 2 851.456527 1700.8985 66646.88 1.0609 0.0009033 -0.096993 -8.2585E-05 0.9639 0.00082072 851.457138449299 856.460682093895 119.35 1.206 119.35 118.98 120.18 0 599 80 14 0 0 0 2.5056E-30 3 76836 188.96 188.96 1 1.5091 1.7965 0 1730000000 703670000 1026300000 3653 922;1257;1869 1337 1377 5775;5776;5777 5776 AVFVDLEPTVIDEVR 15 0 1 Unmodified _AVFVDLEPTVIDEVR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.4612 2 851.456527 1700.8985 67471.55 0.91804 0.00078167 0.099589 8.4796E-05 1.0176 0.00086647 851.456110595096 856.460735373594 115.44 0.41254 115.44 115.29 115.7 -7.6294E-06 62 25 4 0 0 0 0.00022336 3 75313 85.845 85.845 1 1.3539 1.3506 0 11617000 6624900 4992100 3654 922;1257;1869 1337 1377 5778;5779;5780 5779 AVFVDLEPTVIDEVR 15 0 1 Unmodified _AVFVDLEPTVIDEVR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.4616 2 851.456527 1700.8985 66528.31 0.79892 0.00068024 -0.069886 -5.9505E-05 0.72903 0.00062074 851.456924755529 856.460645952981 118.82 1.4427 118.82 118.49 119.93 7.6294E-06 606 98 12 0 0 0 2.4056E-38 4 78256 205.56 205.56 1 1.5275 1.809 0 1701000000 673030000 1028000000 3655 922;1257;1869 1337 1377 5781;5782;5783;5784 5782 AVFVDLEPTVIDEVR 15 0 1 Unmodified _AVFVDLEPTVIDEVR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 856.4615 2 851.456527 1700.8985 66599.12 0.75136 0.00063975 0.11287 9.6101E-05 0.86422 0.00073585 851.456834975265 856.46076143524 131.56 1.1974 131.56 131.28 132.47 0 361 56 12 0 0 0 4.4999E-10 3 79761 137.16 137.16 1 1.2677 1.0993 0 179970000 80240000 99730000 3656 922;1257;1869 1337 1377 5785;5786;5787 5786 AVFVDLEPTVIDEVR 15 0 1 Unmodified _AVFVDLEPTVIDEVR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 856.4602 2 851.456527 1700.8985 66854.97 0.97882 0.00083342 -0.24413 -0.00020786 0.73469 0.00062556 851.456546504369 856.460438358822 131.37 1.1315 131.37 131.1 132.23 0 275 48 12 0 0 0 6.4375E-22 2 78719 174.24 174.24 1 1.2898 1.1263 0 140840000 62346000 78495000 3657 922;1257;1869 1337 1377 5788;5789 5789 AVFWDIK 7 1 0 Unmodified _AVFWDIK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.7515 2 439.742171 877.469789 88181.86 0.18252 8.0261E-05 1.1851 0.00052112 1.3676 0.00060138 439.74270758149 443.749771914779 88.212 0.45364 88.212 87.919 88.373 0 115 41 4 0 0 0 0.041494 1 54346 58.981 33.983 1 0.60767 0.62587 0 18114000 10947000 7167400 3658 1854 1338 1378 5790 5790 AVGASFPLYEPAK 13 1 0 Unmodified _AVGASFPLYEPAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3662 2 675.358628 1348.7027 73917.72 0.53526 0.00036149 0.15269 0.00010312 0.68795 0.00046462 675.358520512015 679.365628379771 87.426 0.90416 87.426 87.163 88.068 0 367 88 7 0 0 0 7.6223E-09 2 52738 117.52 108.56 1 1.7305 1.9434 0 68474000 21689000 46785000 3659 1569 1339 1379 5791;5792 5791 AVGASFPLYEPAK 13 1 0 Unmodified _AVGASFPLYEPAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3662 2 675.358628 1348.7027 73889.51 0.44847 0.00030288 0.17428 0.0001177 0.62275 0.00042058 675.358532577667 679.365685198065 86.515 1.017 86.515 86.227 87.244 0 333 88 6 0 0 0 2.859E-13 3 53282 125.74 114.98 1 1.7609 1.9692 0 86145000 31824000 54321000 3660 1569 1339 1379 5793;5794;5795 5793 AVGASFPLYEPAK 13 1 0 Unmodified _AVGASFPLYEPAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.8431 2 675.358628 1348.7027 73953.41 0.4545 0.00030695 0.13221 8.9289E-05 0.58671 0.00039624 675.358618135132 679.365675147157 100.07 0.99101 100.07 99.731 100.72 0 390 79 7 0 0 0 0.00013248 3 56479 73.781 70.977 1 3.7534 3.0558 0 31144000 6445800 24698000 3661 1569 1339 1379 5796;5797;5798 5796 AVGASFPLYEPAK 13 1 0 Unmodified _AVGASFPLYEPAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.3584 2 675.358628 1348.7027 74493.05 0.50144 0.00033865 0.093879 6.3402E-05 0.59532 0.00040205 675.860183420306 679.365691102144 99.895 0.88498 99.895 99.591 100.48 0 409 77 7 0 0 0 0.00011686 2 55746 76.143 70.602 1 3.7818 3.1369 0 35603000 7717700 27886000 3662 1569 1339 1379 5799;5800 5800 AVGHPFVIQLGR 12 0 1 Unmodified _AVGHPFVIQLGR_ 0 0 0 O14980;B3KWD0;B7ZB16;B4DR01 O14980 O14980 XPO1 Exportin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.2547 3 431.919056 1292.73534 NaN NaN NaN -0.087091 -3.7616E-05 NaN NaN NaN NaN 77.985 0.3845 77.985 77.726 78.111 0 0 0 0 0.0011961 1 45998 64.82 34.615 1 NaN NaN 0 6447000 0 6447000 3663 1371 1340 1380 5801 5801 AVGHPFVIQLGR 12 0 1 Unmodified _AVGHPFVIQLGR_ 0 0 0 O14980;B3KWD0;B7ZB16;B4DR01 O14980 O14980 XPO1 Exportin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.2549 3 431.919056 1292.73534 NaN NaN NaN 0.05409 2.3362E-05 NaN NaN NaN NaN 76.41 0.45949 76.41 76.168 76.627 -7.6294E-06 0 0 0 0.0010836 1 46061 65.5 36.16 1 NaN NaN 0 6627000 0 6627000 3664 1371 1340 1380 5802 5802 AVGIWHCGSCMK 12 1 0 Oxidation (M) _AVGIWHCGSCM(ox)K_ AVGIWHCGSCM(1)K AVGIWHCGSCM(42.34)K 0 1 0 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.3126 2 711.309774 1420.605 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.482 1 32.482 31.982 32.982 0 0 0 0 0.023599 1 16112 42.338 29.382 1 3665 1129 1341 1381 5803 5803 848 AVGIWHCGSCMK 12 1 0 Oxidation (M) _AVGIWHCGSCM(ox)K_ AVGIWHCGSCM(1)K AVGIWHCGSCM(64.71)K 0 1 0 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3115 2 711.309774 1420.605 73289.91 0.96094 0.00068353 -0.23683 -0.00016846 0.72411 0.00051507 711.310021720963 715.818357639428 31.781 0.65075 31.781 31.388 32.038 0 177 58 5 0 0 0 0.00041741 1 15679 64.711 63.805 1 0.76814 0.80095 0 19142000 10101000 9040700 3666 1129 1341 1381 5804 5804 848 AVGIWHCGSCMK 12 1 0 Oxidation (M) _AVGIWHCGSCM(ox)K_ AVGIWHCGSCM(1)K AVGIWHCGSCM(45.6)K 0 1 0 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.8133 2 711.309774 1420.605 73104.2 0.44342 0.00031541 -0.72891 -0.00051848 -0.28549 -0.00020307 711.309629039623 715.316703712649 36.97 0.59263 36.97 36.722 37.314 0 248 50 7 0 0 0 0.0056165 1 16089 45.598 43.657 1 0.57875 0.47093 0 4540000 2858400 1681500 3667 1129 1341 1381 5805 5805 848 AVGIWHCGSCMK 12 1 0 Unmodified _AVGIWHCGSCMK_ 0 0 0 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.3126 2 703.312317 1404.61008 72914.46 0.30079 0.00021155 -0.63013 -0.00044318 -0.32934 -0.00023163 703.813633515333 707.319268628233 51.167 0.31499 51.167 51.022 51.337 0 86 21 6 0 0 0 0.038458 1 24615 34.532 34.129 1 0.77594 0.64955 0 1518700 830660 688030 3668 1129 1341 1382 5806 5806 AVGTFAR 7 0 1 Unmodified _AVGTFAR_ 0 0 0 A0A024R534;O94776;E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8 A0A024R534;E7EQY4 A0A024R534 MTA2;MTA3;tmp_locus_6 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 361.2033 2 361.203213 720.391873 97583.65 -0.091826 -3.3168E-05 -2.0233 -0.00073083 -2.1152 -0.000764 361.203220122398 366.207813532854 25.172 0.56656 25.172 24.994 25.56 0 132 28 8 0 0 0 0.015104 1 10818 99.384 34.053 1 0.93497 1.0502 0 93759000 44535000 49224000 3669 168;1221 1342 1383 5807 5807 AVHEQLAALSQGPISK 16 1 0 Unmodified _AVHEQLAALSQGPISK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.3041 3 550.305416 1647.89442 NaN NaN NaN 0.46898 0.00025808 NaN NaN NaN NaN 71.071 0.34911 71.071 70.921 71.27 0 0 0 0 0.042926 1 37435 26.075 21.226 1 NaN NaN 0 1224800 1224800 0 3670 367 1343 1384 5808 5808 AVIDLNNR 8 0 1 Unmodified _AVIDLNNR_ 0 0 0 P0DN76;Q01081;Q7Z780;B5BU08 P0DN76 P0DN76 U2AF1 Splicing factor U2AF 35 kDa subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.7565 2 457.756341 913.498129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.682 1 43.682 43.182 44.182 0 0 0 0 0.0055644 1 23762 83.364 37.97 1 3671 1463 1344 1385 5809 5809 AVIGIGIEEEDRK 13 1 1 Unmodified _AVIGIGIEEEDRK_ 0 0 1 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.9286 3 476.927946 1427.76201 NaN NaN NaN -0.017808 -8.4931E-06 NaN NaN NaN NaN 59.602 0.33759 59.602 59.504 59.841 3.8147E-06 0 0 0 0.052352 1 34063 26.124 17.395 1 NaN NaN 0 3162200 3162200 0 3672 1418 1345 1386 5810 5810 AVISLQSYFR 10 0 1 Unmodified _AVISLQSYFR_ 0 0 0 Q8IZT6 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8296 2 592.327131 1182.63971 NaN NaN NaN -0.39875 -0.00023619 NaN NaN NaN NaN 103.45 0.14771 103.45 103.39 103.54 0 0 0 0 0.048381 1 63827 47.198 29.812 1 NaN NaN 0 1464700 1464700 0 3673 1902 1346 1387 5811 5811 AVITPDFEK 9 1 0 Unmodified _AVITPDFEK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.2813 2 510.274032 1018.53351 84606.98 0.52883 0.00026985 -0.11694 -5.9673E-05 0.41189 0.00021018 510.274022047116 514.280911577759 63.753 1.1602 63.753 63.373 64.533 0 421 106 5 0 0 0 0.0022292 2 36489 75.109 47.584 1 0.92624 1.0475 0 85418000 43823000 41595000 3674 1813 1347 1388 5812;5813 5812 AVITPDFEK 9 1 0 Unmodified _AVITPDFEK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.2743 2 510.274032 1018.53351 84794.92 0.2958 0.00015094 -0.19223 -9.8088E-05 0.10357 5.2849E-05 510.274129262688 514.280925211309 62.58 1.4085 62.58 62.122 63.53 0 539 125 6 0 0 0 0.0018366 2 36566 80.219 53.617 1 0.83036 0.93051 0 112090000 60598000 51489000 3675 1813 1347 1388 5814;5815 5815 AVITPDFEK 9 1 0 Unmodified _AVITPDFEK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.2806 2 510.274032 1018.53351 84288.49 0.46077 0.00023512 0.082843 4.2272E-05 0.54362 0.00027739 510.274275554374 514.280917595509 73.09 0.86851 73.09 72.696 73.565 0 302 60 7 0 0 0 0.0016071 2 38552 83.206 58.283 1 1.4722 1.1422 0 14176000 5416400 8759900 3676 1813 1347 1388 5816;5817 5817 AVITPDFEK 9 1 0 Unmodified _AVITPDFEK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.281 2 510.274032 1018.53351 84594.88 0.37712 0.00019243 0.11919 6.0819E-05 0.49631 0.00025325 510.274204995636 514.280961892769 73.465 0.88091 73.465 73.078 73.959 -7.6294E-06 320 60 7 0 0 0 0.010363 2 37958 59.35 32.748 1 1.4132 1.1667 0 11337000 4744500 6592900 3677 1813 1347 1388 5818;5819 5819 AVIWPQYVK 9 1 0 Unmodified _AVIWPQYVK_ 0 0 0 B4DSV8;B4DPG9;Q9H3K2;Q9Y6G2;Q9P099 B4DSV8 B4DSV8 GHITM Growth hormone-inducible transmembrane protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.3242 2 552.316035 1102.61752 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.108 1 85.108 84.608 85.608 0 0 0 0 0.052654 1 52339 45.718 20.795 1 3678 1021 1348 1389 5820 5820 AVKDELLSEKPEVK 14 3 0 Unmodified _AVKDELLSEKPEVK_ 0 0 2 B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4 B1AKN6 B1AKN6 NFIA Nuclear factor 1;Nuclear factor 1 A-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 528.9662 3 528.966289 1583.87704 84235.23 0.23083 0.0001221 -0.39421 -0.00020852 -0.16338 -8.6422E-05 528.966197178544 536.980451321171 51.904 0.46954 51.904 51.684 52.154 0 140 33 6 0 0 0 0.0609 1 25018 23.419 23.419 1 0.84585 0.83657 0 1711100 946080 765060 3679 816 1349 1390 5821 5821 AVLALGGSLAGSAAEASHLVTDR 23 0 1 Unmodified _AVLALGGSLAGSAAEASHLVTDR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.0558 3 722.721958 2165.14405 73965.93 0.91426 0.00066075 0.021426 1.5485E-05 0.93568 0.00067624 722.721885428974 726.05769399843 111.02 0.45277 111.02 110.85 111.3 0 70 29 6 0 0 0 2.859E-30 2 69869 131.59 131.59 1 0.78202 0.8066 0 19923000 10966000 8957500 3680 1738 1350 1391 5822;5823 5823 AVLALGGSLAGSAAEASHLVTDR 23 0 1 Unmodified _AVLALGGSLAGSAAEASHLVTDR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.7239 3 722.721958 2165.14405 71594.89 0.85904 0.00062085 0.28352 0.0002049 1.1426 0.00082575 722.722083808992 726.057576543812 110.47 0.4581 110.47 110.25 110.71 0 140 33 6 0 0 0 2.0533E-30 5 71060 133.38 133.38 1 0.65354 0.65984 0 19729000 11739000 7989900 3681 1738 1350 1391 5824;5825;5826;5827;5828 5825 AVLALGGSLAGSAAEASHLVTDR 23 0 1 Unmodified _AVLALGGSLAGSAAEASHLVTDR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.0574 3 722.721958 2165.14405 75087.65 0.95376 0.0006893 0.48046 0.00034724 1.4342 0.0010365 722.722667120407 726.058306435811 122.26 0.34565 122.26 122.04 122.38 7.6294E-06 84 16 8 0 0 0 6.0993E-13 3 72838 97.5 97.5 1 0.72126 0.59001 0 13532000 7385300 6146800 3682 1738 1350 1391 5829;5830;5831 5830 AVLALGGSLAGSAAEASHLVTDR 23 0 1 Unmodified _AVLALGGSLAGSAAEASHLVTDR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.0585 3 722.721958 2165.14405 73339.36 0.99074 0.00071603 0.20074 0.00014508 1.1915 0.00086111 722.722148079553 726.392155765328 122.06 0.31423 122.06 121.86 122.17 0 62 14 6 0 0 0 1.8255E-09 2 71827 72.805 67.948 1 0.89641 0.76813 0 20946000 12445000 8501800 3683 1738 1350 1391 5832;5833 5833 AVLDLESERR 10 0 2 Unmodified _AVLDLESERR_ 0 0 1 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;H7C5K0 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 396.5507 3 396.55081 1186.6306 93518.41 0.083107 3.2956E-05 0.59744 0.00023691 0.68054 0.00026987 396.55090001098 403.223263139244 40.741 0.42826 40.741 40.587 41.016 -3.8147E-06 92 37 4 0 0 0 0.0073434 1 21341 34.755 17.281 1 0.57469 0.63253 0 11921000 7699100 4221700 3684 512 1351 1392 5834 5834 AVLDLESERR 10 0 2 Unmodified _AVLDLESERR_ 0 0 1 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;H7C5K0 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 396.551 3 396.55081 1186.6306 NaN NaN NaN -0.37944 -0.00015047 NaN NaN NaN NaN 39.551 0.28328 39.551 39.398 39.682 0 0 0 0 2.9809E-05 1 20954 82.417 65.474 1 NaN NaN 0 20751000 20751000 0 3685 512 1351 1392 5835 5835 AVLETIR 7 0 1 Unmodified _AVLETIR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97;B0AZM4;A8K6F0;A0A024R9L1;O60306 B3KMR5;B0AZM4 B3KMR5 RRP12;AQR RRP12-like protein;Intron-binding protein aquarius MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 401.2452 2 401.245078 800.475603 95418.43 0.27119 0.00010881 0.25956 0.00010415 0.53075 0.00021296 401.245031469625 406.249286713207 43.667 0.43223 43.667 43.51 43.942 0 99 37 4 0 0 0 0.03754 1 23353 60.799 5.1953 1 1.1811 1.2024 0 29964000 14475000 15489000 3686 907;282 1352 1393 5836 5836 AVLFCLSEDK 10 1 0 Unmodified _AVLFCLSEDK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;E9PS23 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.3049 2 591.297181 1180.57981 80917.85 0.82447 0.00048751 -0.099664 -5.8931E-05 0.7248 0.00042857 591.297448934711 595.304420089581 86.279 0.45327 86.279 86.023 86.476 0 174 36 9 0 0 0 0.00051176 1 51818 85.676 73.629 1 4.6591 5.07 0 48627000 8896800 39730000 3687 1242 1353 1394 5837 5837 AVLFCLSEDK 10 1 0 Unmodified _AVLFCLSEDK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;E9PS23 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.3044 2 591.297181 1180.57981 80639.68 0.75095 0.00044404 -0.59464 -0.00035161 0.15631 9.2427E-05 591.297328503471 595.303967563656 85.253 0.39535 85.253 85.052 85.447 7.6294E-06 151 33 8 0 0 0 0.00022723 1 52370 93.178 79.8 1 5.0237 5.4099 0 37840000 7027700 30812000 3688 1242 1353 1394 5838 5838 AVLFCLSEDK 10 1 0 Unmodified _AVLFCLSEDK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;E9PS23 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.3051 2 591.297181 1180.57981 86950.75 0.5792 0.00034248 -0.095181 -5.6281E-05 0.48402 0.0002862 591.297240920889 595.304169745561 98.35 0.47444 98.35 98.136 98.61 7.6294E-06 69 27 4 0 0 0 0.021656 1 55547 46.158 39.567 1 3.4841 2.9134 0 1272800 294440 978410 3689 1242 1353 1394 5839 5839 AVLGEVVLYSGAR 13 0 1 Unmodified _AVLGEVVLYSGAR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;A0A140T954 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.8708 2 667.377352 1332.74015 79891.75 0.933 0.00062267 -0.15941 -0.00010639 0.77359 0.00051628 667.377225304635 672.381328070789 95.837 0.71153 95.837 95.533 96.244 -7.6294E-06 160 62 4 0 0 0 0.0018119 1 58312 71.555 54.119 1 0.806 0.82518 0 19099000 10496000 8603200 3690 363 1354 1395 5840 5840 AVLGEVVLYSGAR 13 0 1 Unmodified _AVLGEVVLYSGAR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;A0A140T954 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3807 2 667.377352 1332.74015 78830.66 0.66395 0.00044311 -0.0053891 -3.5965E-06 0.65856 0.00043951 667.377635489882 672.381054090225 95.073 0.57073 95.073 94.736 95.307 0 144 50 4 0 0 0 0.00019093 1 59052 70.942 55.062 1 1.0205 1.0085 0 15096000 6017000 9079300 3691 363 1354 1395 5841 5841 AVLGPLVGAVDQGTSSTR 18 0 1 Unmodified _AVLGPLVGAVDQGTSSTR_ 0 0 0 F8WF44;F8WDA9;F8WBI8;F8WC39;A6NP46;A8K8B7;Q14409;P32189 F8WF44 F8WF44 GK;GK3P Putative glycerol kinase 3;Glycerol kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.4708 2 864.467958 1726.92136 NaN NaN NaN -1.5393 -0.0013307 NaN NaN NaN NaN 95.806 0.57083 95.806 95.505 96.076 -7.6294E-06 0 0 0 0.00062353 1 58290 56.951 43.995 1 NaN NaN 0 10675000 0 10675000 3692 690 1355 1396 5842 5842 AVLIAGQPGTGK 12 1 0 Unmodified _AVLIAGQPGTGK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30;X6R2L4;M0QXI6 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.3271 2 556.327131 1110.63971 80844.55 0.21824 0.00012141 0.29374 0.00016341 0.51198 0.00028483 556.327764081823 560.33409541142 51.318 0.67691 51.318 50.969 51.646 3.8147E-06 267 47 8 0 0 0 0.0043375 1 25200 53.751 53.751 1 1.2646 0.9797 0 13302000 6199400 7102600 3693 2120 1356 1397 5843 5843 AVLIAGQPGTGK 12 1 0 Unmodified _AVLIAGQPGTGK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30;X6R2L4;M0QXI6 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.329 2 556.327131 1110.63971 81456.77 0.35367 0.00019676 0.17116 9.5218E-05 0.52483 0.00029198 556.327580118106 560.334113118776 51.547 0.73305 51.547 51.171 51.904 0 266 51 7 0 0 0 0.00098904 2 24725 62.823 54.936 1 1.2622 1.0388 0 10327000 4769300 5558100 3694 2120 1356 1397 5844;5845 5845 AVLLAGPPGTGK 12 1 0 Unmodified _AVLLAGPPGTGK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.8248 2 540.824224 1079.63389 82342.39 0.37814 0.00020451 -0.12871 -6.9608E-05 0.24943 0.0001349 540.824049942664 544.831171718075 62.137 0.87183 62.137 61.808 62.68 0 356 76 7 0 0 0 0.00023436 2 35526 85.731 85.731 1 0.81787 0.92745 0 95956000 54137000 41819000 3695 1076 1357 1398 5846;5847 5846 AVLLAGPPGTGK 12 1 0 Unmodified _AVLLAGPPGTGK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.8312 2 540.824224 1079.63389 NaN NaN NaN -0.14194 -7.6767E-05 NaN NaN NaN NaN 60.776 0.80208 60.776 60.562 61.364 0 0 0 0 0.0017609 1 35543 74.376 29.981 1 NaN NaN 0 53628000 0 53628000 3696 1076 1357 1398 5848 5848 AVLLAGPPGTGK 12 1 0 Unmodified _AVLLAGPPGTGK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.8312 2 540.824224 1079.63389 81674.56 0.32591 0.00017626 0.51284 0.00027735 0.83875 0.00045361 540.824417178298 544.831527534885 70.979 0.6356 70.979 70.74 71.375 0 197 40 8 0 0 0 0.00020607 2 37267 79.986 79.986 1 1.1539 0.91999 0 19883000 9273700 10609000 3697 1076 1357 1398 5849;5850 5849 AVLLAGPPGTGK 12 1 0 Unmodified _AVLLAGPPGTGK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.8312 2 540.824224 1079.63389 81927.54 0.033277 1.7997E-05 0.7356 0.00039783 0.76888 0.00041583 540.824528092707 544.831664838873 71.397 0.59103 71.397 71.142 71.733 0 163 35 7 0 0 0 0.00032618 2 36691 72.643 72.643 1 1.1573 0.9295 0 17528000 8636300 8891800 3698 1076 1357 1398 5851;5852 5851 AVLLDLEPR 9 0 1 Unmodified _AVLLDLEPR_ 0 0 0 A0A1B4Z394;Q9NRH3;P23258;K7EKE5;K7EIS0 A0A1B4Z394 A0A1B4Z394 TUBG2;TUBG1 Tubulin gamma-2 chain;Tubulin gamma-1 chain;Tubulin gamma chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.3084 2 513.303124 1024.5917 88127.22 0.7056 0.00036219 -0.0093538 -4.8013E-06 0.69625 0.00035739 513.302925376446 518.307347178863 91.461 0.57877 91.461 91.179 91.757 0 106 45 4 0 0 0 0.0074258 2 55381 61.999 18.753 1 1.2752 1.274 0 8832100 3303400 5528700 3699 637 1358 1399 5853;5854 5854 AVLLQVICLYQK 12 1 0 Unmodified _AVLLQVICLYQK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.4287 2 724.420705 1446.82686 NaN NaN NaN -0.40263 -0.00029167 NaN NaN NaN NaN 130.07 0.39015 130.07 129.83 130.22 0 0 0 0 0.0020128 1 78752 71.501 71.501 1 NaN NaN 0 594440 0 594440 3700 1392 1359 1400 5855 5855 AVLLVGLCDSGK 12 1 0 Unmodified _AVLLVGLCDSGK_ 0 0 0 Q549N5;Q9Y5M8;C9J5Z8 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.3406 2 616.339381 1230.66421 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.723 1 89.723 89.223 90.223 0 0 0 0 0.028809 1 55424 46.462 16.652 1 3701 1794 1360 1401 5856 5856 AVLMEKPDVVVGTPSR 16 1 1 Oxidation (M) _AVLM(ox)EKPDVVVGTPSR_ AVLM(1)EKPDVVVGTPSR AVLM(40.72)EKPDVVVGTPSR 0 1 1 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.3134 3 571.978312 1712.91311 78715.16 0.47136 0.00026961 0.21135 0.00012089 0.6827 0.00039049 572.312947272106 577.985960235503 58.731 0.92023 58.731 58.159 59.079 -3.8147E-06 292 74 8 0 0 0 0.00062177 1 33303 40.724 34.143 1 1.0517 1.256 0 52532000 28007000 24525000 3702 2081 1361 1402 5857 5857 1917 AVLMEKPDVVVGTPSR 16 1 1 Oxidation (M) _AVLM(ox)EKPDVVVGTPSR_ AVLM(1)EKPDVVVGTPSR AVLM(55.98)EKPDVVVGTPSR 0 1 1 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.9853 3 571.978312 1712.91311 NaN NaN NaN -0.13547 -7.7485E-05 NaN NaN NaN NaN 58.358 0.45467 58.358 58.116 58.571 -3.8147E-06 0 0 0 0.0016244 1 33017 55.975 39.837 1 NaN NaN 0 11726000 0 11726000 3703 2081 1361 1402 5858 5858 1917 AVLMEKPDVVVGTPSR 16 1 1 Oxidation (M) _AVLM(ox)EKPDVVVGTPSR_ AVLM(1)EKPDVVVGTPSR AVLM(75.46)EKPDVVVGTPSR 0 1 1 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.9788 3 571.978312 1712.91311 78368.16 0.45473 0.0002601 0.045344 2.5936E-05 0.50008 0.00028603 571.978320821849 577.985909422142 57.17 0.52125 57.17 56.865 57.386 3.8147E-06 211 38 8 0 0 0 3.7229E-05 1 32974 75.463 63.989 1 1.2639 1.4594 0 30519000 14918000 15600000 3704 2081 1361 1402 5859 5859 1917 AVLMEKPDVVVGTPSR 16 1 1 Oxidation (M) _AVLM(ox)EKPDVVVGTPSR_ AVLM(1)EKPDVVVGTPSR AVLM(63.54)EKPDVVVGTPSR 0 1 1 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.2814 3 571.978312 1712.91311 77849.41 0.67722 0.00038736 -0.42011 -0.00024029 0.25711 0.00014706 571.977967209154 577.985610025488 57.554 0.52196 57.554 57.353 57.875 0 231 42 8 0 0 0 9.3649E-06 1 33247 63.543 63.543 1 1.1195 1.2938 0 31476000 14268000 17208000 3705 2081 1361 1402 5860 5860 1917 AVLPTPVTK 9 1 0 Unmodified _AVLPTPVTK_ 0 0 0 O75151;Q8N359;B4DH04 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.2962 2 463.289485 924.564418 91803.19 0.17935 8.3092E-05 -0.43638 -0.00020217 -0.25703 -0.00011908 463.289148471624 467.296171394963 56.671 0.51019 56.671 56.403 56.913 -3.8147E-06 140 45 4 0 0 0 0.0074668 2 31950 61.962 23.171 1 1.1082 1.1381 0 10660000 4751000 5909200 3706 1400 1362 1403 5861;5862 5861 AVLPTPVTK 9 1 0 Unmodified _AVLPTPVTK_ 0 0 0 O75151;Q8N359;B4DH04 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2964 2 463.289485 924.564418 91092.27 0.13503 6.2559E-05 -0.07013 -3.2491E-05 0.064902 3.0068E-05 463.289313491043 467.296406834483 55.562 0.55463 55.562 55.333 55.888 0 138 41 5 0 0 0 0.0074668 1 31885 61.962 23.171 1 1.2244 1.237 0 13187000 5504900 7682100 3707 1400 1362 1403 5863 5863 AVLQALEVLPVAPPPEPR 18 0 1 Unmodified _AVLQALEVLPVAPPPEPR_ 0 0 0 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 954.0594 2 948.551293 1895.08803 64970.77 0.77946 0.00073936 -0.064884 -6.1546E-05 0.71458 0.00067781 948.550813131017 954.056806016295 123.41 0.37763 123.41 123.22 123.59 0 126 27 6 0 0 0 0.00022388 2 79986 61.212 61.212 1 1.0538 1.077 0 6705900 3276700 3429300 3708 278 1363 1404 5864;5865 5865 AVLQALEVLPVAPPPEPR 18 0 1 Unmodified _AVLQALEVLPVAPPPEPR_ 0 0 0 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.0552 2 948.551293 1895.08803 64523.5 1.0531 0.00099894 0.20143 0.00019107 1.2546 0.00119 949.053164568498 954.057259413736 122.97 0.35849 122.97 122.79 123.15 0 110 25 6 0 0 0 1.3259E-05 3 81581 77.527 77.527 1 1.0483 1.0372 0 15338000 7776100 7561900 3709 278 1363 1404 5866;5867;5868 5868 AVLQEEQANLWFSK 14 1 0 Unmodified _AVLQEEQANLWFSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 836.4365 2 831.927937 1661.84132 NaN NaN NaN 0.15823 0.00013163 NaN NaN NaN NaN 100.32 0.57455 100.32 99.959 100.53 7.6294E-06 0 0 0 2.2359E-10 2 61362 116.77 92.915 1 NaN NaN 0 8141600 0 8141600 3710 1898 1364 1405 5869;5870 5869 AVLQEEQANLWFSK 14 1 0 Unmodified _AVLQEEQANLWFSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.437 2 831.927937 1661.84132 NaN NaN NaN -0.029151 -2.4251E-05 NaN NaN NaN NaN 99.471 0.53186 99.471 99.288 99.819 7.6294E-06 0 0 0 8.9508E-10 2 62285 112.13 92.364 1 NaN NaN 0 10704000 0 10704000 3711 1898 1364 1405 5871;5872 5872 AVLQEEQANLWFSK 14 1 0 Unmodified _AVLQEEQANLWFSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 832.4286 2 831.927937 1661.84132 NaN NaN NaN 0.76659 0.00063775 NaN NaN NaN NaN 112.61 0.66691 112.61 112.29 112.95 0 0 0 0 1.3861E-15 1 65406 128.85 97.958 1 NaN NaN 0 10970000 10970000 0 3712 1898 1364 1405 5873 5873 AVLQEEQANLWFSK 14 1 0 Unmodified _AVLQEEQANLWFSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 835.9361 2 831.927937 1661.84132 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.59 1 112.59 112.09 113.09 0 0 0 0 7.149E-25 1 65435 144.1 96.905 1 3713 1898 1364 1405 5874 5874 AVLQEEQANLWFSK 14 1 0 Unmodified _AVLQEEQANLWFSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 836.4372 2 831.927937 1661.84132 67038.54 0.75572 0.0006287 0.55413 0.000461 1.3099 0.0010897 831.927451327503 835.934886464698 112.5 0.624 112.5 112.25 112.87 -7.6294E-06 243 31 11 0 0 0 2.446E-10 2 64374 124.42 124.42 1 1.1929 0.95585 0 19907000 8959300 10948000 3714 1898 1364 1405 5875;5876 5875 AVLQFTPASWTYVR 14 0 1 Unmodified _AVLQFTPASWTYVR_ 0 0 0 Q9BSY0;A8KAH1;P48651 Q9BSY0 Q9BSY0 PTDSS1 Phosphatidylserine synthase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.9376 2 819.935565 1637.85658 75829.73 0.67891 0.00055666 0.59792 0.00049026 1.2768 0.0010469 819.936618833708 824.940601983238 115.4 0.28828 115.4 115.24 115.53 -7.6294E-06 48 18 4 0 0 0 0.0016848 1 73420 51.927 43.226 1 0.81902 0.84994 0 5655800 3153500 2502300 3715 793 1365 1406 5877 5877 AVLQPSINEEIQTVFNK 17 1 0 Unmodified _AVLQPSINEEIQTVFNK_ 0 0 0 F2Z2A4;H0Y501;H7C1M5;Q9H147 F2Z2A4 F2Z2A4 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.0198 2 965.517647 1929.02074 63267.13 0.38794 0.00037456 0.019436 1.8766E-05 0.40737 0.00039333 966.019674027201 970.025625462467 127.99 0.40179 127.99 127.78 128.18 0 67 15 6 0 0 0 0.014452 1 77215 28.903 28.903 1 1.0878 0.86203 0 4211900 2027300 2184600 3716 1252 1366 1407 5878 5878 AVLQPSINEEIQTVFNK 17 1 0 Unmodified _AVLQPSINEEIQTVFNK_ 0 0 0 F2Z2A4;H0Y501;H7C1M5;Q9H147 F2Z2A4 F2Z2A4 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.0281 2 965.517647 1929.02074 62879.84 0.24963 0.00024102 0.36079 0.00034835 0.61042 0.00058937 965.517735565726 970.026485363253 127.81 0.40582 127.81 127.6 128.01 0 57 15 6 0 0 0 0.004162 1 76143 35.523 35.523 1 0.99172 0.80984 0 4712300 2546400 2165900 3717 1252 1366 1407 5879 5879 AVLREEDTSNTTFGPADLK 19 1 1 Unmodified _AVLREEDTSNTTFGPADLK_ 0 0 1 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.0125 3 688.679648 2063.01711 73166.33 0.57564 0.00039643 0.0097207 6.6944E-06 0.58536 0.00040313 689.013902531441 695.021560548561 70.011 0.47128 70.011 69.833 70.304 0 157 37 6 0 0 0 0.0053114 1 41861 24.506 20.844 1 0.88869 1.0008 0 13826000 7471000 6355100 3718 1224 1367 1408 5880 5880 AVLREEDTSNTTFGPADLK 19 1 1 Unmodified _AVLREEDTSNTTFGPADLK_ 0 0 1 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.6876 3 688.679648 2063.01711 73357.45 0.51112 0.000352 1.9892 0.0013699 2.5003 0.0017219 689.013720212119 694.687422334712 81.741 0.51728 81.741 81.498 82.016 0 165 27 9 0 0 0 0.00029499 2 43464 37.112 37.112 1 2.0848 1.7516 0 4721100 1293400 3427700 3719 1224 1367 1408 5881;5882 5881 AVLSCIAPSAK 11 1 0 Unmodified _AVLSCIAPSAK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.8146 2 558.807716 1115.60088 80143.55 0.64105 0.00035823 -0.065141 -3.6401E-05 0.57591 0.00032182 558.807657889271 562.814636506199 57.676 0.62717 57.676 57.406 58.034 0 257 50 8 0 0 0 0.00045925 3 32660 76.827 51.09 1 0.76756 0.86977 0 91989000 51119000 40871000 3720 1995 1368 1409 5883;5884;5885 5885 AVLSCIAPSAK 11 1 0 Unmodified _AVLSCIAPSAK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.8078 2 558.807716 1115.60088 80414.61 0.67855 0.00037918 0.061567 3.4404E-05 0.74012 0.00041358 558.807607607506 562.81480425166 56.699 0.64643 56.699 56.376 57.022 0 220 48 6 0 0 0 5.3076E-10 3 32632 129.63 101.41 1 0.75965 0.8559 0 59595000 32318000 27277000 3721 1995 1368 1409 5886;5887;5888 5887 AVLSCIAPSAK 11 1 0 Unmodified _AVLSCIAPSAK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.8148 2 558.807716 1115.60088 78172.38 0.62986 0.00035197 -0.19223 -0.00010742 0.43763 0.00024455 558.807356228517 562.814684039494 66.61 1.0484 66.61 66.222 67.271 -7.6294E-06 267 64 7 0 0 0 0.0075017 1 34520 52.49 35.714 1 1.603 1.244 0 14325000 5280400 9044700 3722 1995 1368 1409 5889 5889 AVLSCIAPSAK 11 1 0 Unmodified _AVLSCIAPSAK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.8151 2 558.807716 1115.60088 79959.54 0.4921 0.00027499 0.032448 1.8132E-05 0.52455 0.00029312 558.807351656691 562.814758727953 67.031 0.89834 67.031 66.671 67.569 0 252 51 8 0 0 0 0.0030512 2 33920 60.518 44.316 1 1.5185 1.2555 0 11872000 4448000 7423500 3723 1995 1368 1409 5890;5891 5890 AVLTFALDSVER 12 0 1 Unmodified _AVLTFALDSVER_ 0 0 0 Q9NQT4;M0R050;B2RC50 Q9NQT4 Q9NQT4 EXOSC5 Exosome complex component RRP46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.8618 2 660.861534 1319.70852 76547.98 0.67928 0.00044891 -0.08766 -5.7931E-05 0.59162 0.00039098 660.861446613284 665.86529412256 108.11 0.58343 108.11 107.87 108.45 0 197 44 6 0 0 0 4.6772E-06 2 67464 110.53 92.222 1 0.79485 0.823 0 23115000 11441000 11675000 3724 2060 1369 1410 5892;5893 5893 AVLTFALDSVER 12 0 1 Unmodified _AVLTFALDSVER_ 0 0 0 Q9NQT4;M0R050;B2RC50 Q9NQT4 Q9NQT4 EXOSC5 Exosome complex component RRP46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.8656 2 660.861534 1319.70852 77590.69 0.97157 0.00064208 -0.31356 -0.00020722 0.65802 0.00043486 660.861186615661 665.865118328479 119.51 0.41841 119.51 119.25 119.67 0 75 16 7 0 0 0 0.0020652 1 70739 59.542 40.271 1 0.82593 0.70964 0 7953900 4435200 3518700 3725 2060 1369 1410 5894 5894 AVLTFALDSVER 12 0 1 Unmodified _AVLTFALDSVER_ 0 0 0 Q9NQT4;M0R050;B2RC50 Q9NQT4 Q9NQT4 EXOSC5 Exosome complex component RRP46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 660.8613 2 660.861534 1319.70852 77286.14 0.65948 0.00043583 -0.26603 -0.00017581 0.39345 0.00026002 660.861456926683 665.865012799128 119.26 0.38695 119.26 119.09 119.47 0 73 16 7 0 0 0 0.00029759 2 69696 73.067 63.27 1 0.9374 0.76322 0 9692400 5333600 4358800 3726 2060 1369 1410 5895;5896 5896 AVLTVQEPPSFVK 13 1 0 Unmodified _AVLTVQEPPSFVK_ 0 0 0 C0JYZ2;D3DPG0;A0A0A0MTS7;Q8WZ42 C0JYZ2 C0JYZ2 TTN Titin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.9003 2 707.90066 1413.78677 74002.13 0.88995 0.00063 -0.23896 -0.00016916 0.65099 0.00046084 707.900599235329 711.907302513448 124.02 0.45361 124.02 123.79 124.24 0 166 30 7 0 0 0 0.015682 2 80550 36.693 36.693 1 0.60719 0.61695 0 13743000 8474400 5268100 3727 489 1370 1411 5897;5898 5898 AVLVALK 7 1 0 Unmodified _AVLVALK_ 0 0 0 A0A024RCN6;P26640;A0A140T936;B4DT32 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.2502 2 357.249632 712.484711 105367 0.0049012 1.7509E-06 0.20729 7.4054E-05 0.21219 7.5805E-05 357.249616540661 361.256722198357 61.402 0.54597 61.402 61.137 61.683 -3.8147E-06 111 42 4 0 0 0 0.030029 1 35061 69.39 10.729 1 1.0719 1.0558 0 8582400 4595900 3986500 3728 363 1371 1412 5899 5899 AVLVALK 7 1 0 Unmodified _AVLVALK_ 0 0 0 A0A024RCN6;P26640;A0A140T936;B4DT32 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 357.2497 2 357.249632 712.484711 104021.7 0.20189 7.2125E-05 -0.042276 -1.5103E-05 0.15962 5.7022E-05 357.249545554952 361.256617437376 60.039 0.65004 60.039 59.739 60.389 0 109 44 4 0 0 0 0.034932 1 34929 61.997 3.3364 1 1.1099 1.1209 0 8363900 4368800 3995100 3729 363 1371 1412 5900 5900 AVLVDLEPGTMDSVR 15 0 1 Oxidation (M) _AVLVDLEPGTM(ox)DSVR_ AVLVDLEPGTM(1)DSVR AVLVDLEPGTM(108.9)DSVR 0 1 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;A0A075B724;Q3ZCM7;A0A183YE00;P04350;B4DE77;B4DJ43;M0R278 Q8IZ29;Q3ZCM7;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A;TUBB8 Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.4117 2 809.411262 1616.80797 66518.58 0.58478 0.00047333 -0.78165 -0.00063267 -0.19686 -0.00015934 809.411272479666 814.414141806387 88.538 0.97569 88.538 88.057 89.033 0 442 72 9 0 0 0 8.9815E-08 2 53305 108.9 108.9 1 2.5652 2.9042 0 105160000 25032000 80133000 3730 1660;1441;1778 1372 1413 5901;5902 5901 1141 AVLVDLEPGTMDSVR 15 0 1 Oxidation (M) _AVLVDLEPGTM(ox)DSVR_ AVLVDLEPGTM(1)DSVR AVLVDLEPGTM(125.97)DSVR 0 1 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;A0A075B724;Q3ZCM7;A0A183YE00;P04350;B4DE77;B4DJ43;M0R278 Q8IZ29;Q3ZCM7;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A;TUBB8 Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.4157 2 809.411262 1616.80797 66242.02 0.79135 0.00064053 -0.55689 -0.00045075 0.23446 0.00018977 809.411250557663 814.414239686638 87.778 0.93056 87.778 87.256 88.187 0 415 75 9 0 0 0 2.492E-15 2 54044 125.97 105.76 1 2.341 2.6749 0 152130000 47204000 104930000 3731 1660;1441;1778 1372 1413 5903;5904 5904 1141 AVLVDLEPGTMDSVR 15 0 1 Oxidation (M) _AVLVDLEPGTM(ox)DSVR_ AVLVDLEPGTM(1)DSVR AVLVDLEPGTM(53.53)DSVR 0 1 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;A0A075B724;Q3ZCM7;A0A183YE00;P04350;B4DE77;B4DJ43;M0R278 Q8IZ29;Q3ZCM7;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A;TUBB8 Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-4A chain ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 809.9137 2 809.411262 1616.80797 NaN NaN NaN 0.058749 4.7552E-05 NaN NaN NaN NaN 101.17 0.63364 101.17 100.88 101.51 -7.6294E-06 0 0 0 0.0022441 1 56378 53.528 46.4 1 NaN NaN 0 4534000 4534000 0 3732 1660;1441;1778 1372 1413 5905 5905 1141 AVLVDLEPGTMDSVR 15 0 1 Unmodified _AVLVDLEPGTMDSVR_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;A0A075B724;Q3ZCM7;A0A183YE00;P04350;B4DE77;B4DJ43;M0R278 Q8IZ29;Q3ZCM7;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A;TUBB8 Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-4A chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.4155 2 801.413805 1600.81306 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.45 1 102.45 101.95 102.95 0 0 0 0 0.045895 1 63086 39.917 22.481 1 3733 1660;1441;1778 1372 1414 5906 5906 AVLVDLEPGTMDSVR 15 0 1 Unmodified _AVLVDLEPGTMDSVR_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;A0A075B724;Q3ZCM7;A0A183YE00;P04350;B4DE77;B4DJ43;M0R278 Q8IZ29;Q3ZCM7;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A;TUBB8 Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.4156 2 801.413805 1600.81306 75172.87 0.47797 0.00038305 0.66473 0.00053273 1.1427 0.00091578 801.414745988583 806.919759791602 101.84 0.46639 101.84 101.63 102.09 0 86 35 5 0 0 0 0.0044264 1 64107 39.266 39.266 1 1.0778 1.0729 0 8009300 3713300 4296000 3734 1660;1441;1778 1372 1414 5907 5907 AVMSNLSAHGVK 12 1 0 Oxidation (M) _AVM(ox)SNLSAHGVK_ AVM(1)SNLSAHGVK AVM(90.11)SNLSAHGVK 0 1 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3263 2 615.31898 1228.62341 NaN NaN NaN 0.35142 0.00021624 NaN NaN NaN NaN 20.972 0.14698 20.972 20.912 21.059 0 0 0 0 0.00010295 1 7358 90.108 46.3 1 NaN NaN 0 987780 0 987780 3735 1205 1373 1415 5908 5908 913 AVNPFLADVDK 11 1 0 Unmodified _AVNPFLADVDK_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.8163 2 594.816596 1187.61864 NaN NaN NaN 0.089915 5.3483E-05 NaN NaN NaN NaN 86.344 0.38634 86.344 86.09 86.476 0 0 0 0 0.046279 1 52046 45.368 18.984 1 NaN NaN 0 13135000 13135000 0 3736 1725 1374 1416 5909 5909 AVNPFLADVDK 11 1 0 Unmodified _AVNPFLADVDK_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.8242 2 594.816596 1187.61864 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.233 1 85.233 84.733 85.733 0 0 0 0 0.00021707 1 52426 79.974 48.039 1 3737 1725 1374 1416 5910 5910 AVNPFLADVDK 11 1 0 Unmodified _AVNPFLADVDK_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.8243 2 594.816596 1187.61864 NaN NaN NaN -0.25923 -0.0001542 NaN NaN NaN NaN 98.663 0.30325 98.663 98.468 98.771 0 0 0 0 0.024652 1 54817 51.762 34.986 1 NaN NaN 0 1309900 0 1309900 3738 1725 1374 1416 5911 5911 AVNSATGVPTV 11 0 0 Unmodified _AVNSATGVPTV_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;Q5VX58;Q3ZCS4;Q9H361;H0YAS7;H0YAS6;H0YB75;H0YC10;L0R533 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3;RLIM Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1015.5439 1 1015.54185 1014.53457 NaN NaN NaN 0.79781 0.00081021 NaN NaN NaN NaN 68.724 0.63092 68.724 68.379 69.01 0 0 0 0 0.0043726 1 40893 72.879 55.253 1 3739 273 1375 1417 5912 5912 AVNSIISIVFGTR 13 0 1 Unmodified _AVNSIISIVFGTR_ 0 0 0 J3KTG7;Q96QE5 J3KTG7 J3KTG7 TEFM Transcription elongation factor, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.9031 2 688.898451 1375.78235 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.6 1 128.6 128.1 129.1 0 0 0 0 0.0013987 1 83871 73.781 60.012 1 3740 1332 1376 1418 5913 5913 AVNSIISIVFGTR 13 0 1 Unmodified _AVNSIISIVFGTR_ 0 0 0 J3KTG7;Q96QE5 J3KTG7 J3KTG7 TEFM Transcription elongation factor, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.9031 2 688.898451 1375.78235 NaN NaN NaN 0.55957 0.00038548 NaN NaN NaN NaN 128.2 0.32704 128.2 128.05 128.37 -1.5259E-05 0 0 0 7.3128E-05 1 85692 91.937 75.799 1 NaN NaN 0 1324600 0 1324600 3741 1332 1376 1418 5914 5914 AVNSIISIVFGTR 13 0 1 Unmodified _AVNSIISIVFGTR_ 0 0 0 J3KTG7;Q96QE5 J3KTG7 J3KTG7 TEFM Transcription elongation factor, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8995 2 688.898451 1375.78235 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.2 1 128.2 127.7 128.7 -1.5259E-05 0 0 0 0.00016165 1 85673 91.855 65.34 1 3742 1332 1376 1418 5915 5915 AVPGGAGDASVLPSLPR 17 0 1 Unmodified _AVPGGAGDASVLPSLPR_ 0 0 0 H0YNE5;H0YLG5;A0A024R9P6;Q96TC7;B3KUI4 H0YNE5 H0YNE5 RMDN3;FAM82C Regulator of microtubule dynamics protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.4321 2 782.428104 1562.84166 NaN NaN NaN -0.28425 -0.00022241 NaN NaN NaN NaN 94.745 0.48001 94.745 94.521 95.001 -7.6294E-06 0 0 0 0.0033463 1 57629 53.001 35.137 1 NaN NaN 0 7470300 0 7470300 3743 285 1377 1419 5916 5916 AVPGGAGDASVLPSLPR 17 0 1 Unmodified _AVPGGAGDASVLPSLPR_ 0 0 0 H0YNE5;H0YLG5;A0A024R9P6;Q96TC7;B3KUI4 H0YNE5 H0YNE5 RMDN3;FAM82C Regulator of microtubule dynamics protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.4318 2 782.428104 1562.84166 NaN NaN NaN -0.33761 -0.00026416 NaN NaN NaN NaN 93.961 0.49371 93.961 93.738 94.232 -7.6294E-06 0 0 0 0.0049864 1 58422 50.562 35.297 1 NaN NaN 0 12834000 0 12834000 3744 285 1377 1419 5917 5917 AVPGTEVPGHK 11 1 0 Unmodified _AVPGTEVPGHK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9;A0A0A0MSJ1;F5H8B8;F5H797;F5H692;Q7Z607 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2958 2 546.29583 1090.57711 81202.12 0.033071 1.8067E-05 0.21824 0.00011922 0.25131 0.00013729 546.295654168642 550.303069761897 22.023 0.28651 22.023 21.875 22.161 0 60 15 5 0 0 0 0.004207 2 8149 58.433 54.982 1 1.1554 1.2217 0 16267000 8220600 8046500 3745 104 1378 1420 5918;5919 5919 AVPGTEVPGHK 11 1 0 Unmodified _AVPGTEVPGHK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9;A0A0A0MSJ1;F5H8B8;F5H797;F5H692;Q7Z607 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.303 2 546.29583 1090.57711 80272.05 0.33491 0.00018296 0.70906 0.00038736 1.044 0.00057032 546.296010072787 550.302951729648 21.808 0.41471 21.808 21.607 22.021 0 91 19 9 0 0 0 0.00045925 1 7878 76.827 76.827 1 0.8286 0.85246 0 32368000 17131000 15236000 3746 104 1378 1420 5920 5920 AVPLALALISVSNPR 15 0 1 Unmodified _AVPLALALISVSNPR_ 0 0 0 Q59EG8;Q13200;B4DM22;Q13041;H7C1H2 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.962 2 760.961583 1519.90861 69642.92 0.89591 0.00068175 -0.0060254 -4.5851E-06 0.88988 0.00067717 760.961507978384 765.965735027414 126.42 0.65543 126.42 126.13 126.78 7.6294E-06 282 49 8 0 0 0 4.5278E-07 1 82162 103.43 103.43 1 2.2462 2.2978 0 35388000 10631000 24757000 3747 1707 1379 1421 5921 5921 AVPLALALISVSNPR 15 0 1 Unmodified _AVPLALALISVSNPR_ 0 0 0 Q59EG8;Q13200;B4DM22;Q13041;H7C1H2 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.9628 2 760.961583 1519.90861 69297.08 0.96977 0.00073796 0.011429 8.6972E-06 0.9812 0.00074665 760.961550799675 765.965712620736 125.91 0.60805 125.91 125.63 126.24 0 216 37 8 0 0 0 2.1251E-07 2 83829 108.35 108.35 1 2.1606 2.3624 0 35302000 11060000 24242000 3748 1707 1379 1421 5922;5923 5923 AVPLAVPLGQTEVFQALQR 19 0 1 Unmodified _AVPLAVPLGQTEVFQALQR_ 0 0 0 Q86W42 Q86W42 Q86W42 THOC6 THO complex subunit 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1019.5801 2 1019.07821 2036.14186 61829.43 0.76953 0.00078421 0.04562 4.649E-05 0.81515 0.0008307 1019.07848009479 1024.08224040155 126.8 0.33547 126.8 126.63 126.97 -7.6294E-06 133 22 8 0 0 0 3.2294E-05 1 82510 56.122 56.122 1 0.89844 0.90262 0 9227400 4825700 4401700 3749 1886 1380 1422 5924 5924 AVPLAVPLGQTEVFQALQR 19 0 1 Unmodified _AVPLAVPLGQTEVFQALQR_ 0 0 0 Q86W42 Q86W42 Q86W42 THOC6 THO complex subunit 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1019.58 2 1019.07821 2036.14186 61082.29 0.683 0.00069603 0.62773 0.00063971 1.3107 0.0013357 1019.57969025024 1024.5848731327 126.43 0.41724 126.43 126.24 126.66 0 117 25 7 0 0 0 0.00028945 1 84290 56.205 56.205 1 1.0654 1.052 0 12750000 6395300 6354600 3750 1886 1380 1422 5925 5925 AVPSSFSPFVEFK 13 1 0 Unmodified _AVPSSFSPFVEFK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.3713 2 721.371735 1440.72892 73722.71 0.87446 0.00063081 -0.28594 -0.00020627 0.58853 0.00042455 721.371844374927 725.378137450612 112.31 0.60538 112.31 112 112.61 0 123 41 4 0 0 0 0.00014719 2 70809 73.067 68.912 1 0.78307 0.78164 0 7833800 4586800 3247000 3751 135 1381 1423 5926;5927 5926 AVPSSFSPFVEFK 13 1 0 Unmodified _AVPSSFSPFVEFK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.8735 2 721.371735 1440.72892 73853.04 0.93777 0.00067648 -0.087776 -6.3319E-05 0.85 0.00061316 721.372037621487 725.378321331988 111.71 0.66052 111.71 111.38 112.04 0 135 44 5 0 0 0 0.0059861 1 72019 46.706 42.943 1 0.78263 0.79372 0 9082100 5520700 3561400 3752 135 1381 1423 5928 5928 AVPSSFSPFVEFK 13 1 0 Unmodified _AVPSSFSPFVEFK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.8732 2 721.371735 1440.72892 71356.59 0.97058 0.00070015 0.81525 0.0005881 1.7858 0.0012882 721.371709670753 725.378614063043 123.5 0.60176 123.5 123.23 123.83 -7.6294E-06 105 23 8 0 0 0 0.00011207 2 73830 80.102 80.102 1 1.5748 1.2454 0 6166700 2269000 3897700 3753 135 1381 1423 5929;5930 5930 AVPSSFSPFVEFK 13 1 0 Unmodified _AVPSSFSPFVEFK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.3791 2 721.371735 1440.72892 71479.05 0.9282 0.00066958 0.29098 0.0002099 1.2192 0.00087948 721.371895664004 725.37868740331 123.29 0.74744 123.29 123.01 123.76 0 117 26 8 0 0 0 0.00032476 2 72701 64.439 64.439 1 1.6097 1.3135 0 6201300 2294600 3906600 3754 135 1381 1423 5931;5932 5931 AVPSWFVR 8 0 1 Unmodified _AVPSWFVR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.2697 2 481.266345 960.518136 87422.02 0.32561 0.00015671 0.27055 0.0001302 0.59616 0.00028691 481.266609858175 486.270442851292 86.302 0.44501 86.302 86.09 86.535 0 163 33 8 0 0 0 0.011011 1 51879 70.912 55.473 1 1.6182 1.7584 0 50458000 21466000 28992000 3755 1561 1382 1424 5933 5933 AVPSWFVR 8 0 1 Unmodified _AVPSWFVR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.2706 2 481.266345 960.518136 88973.74 0.5181 0.00024934 -0.51816 -0.00024937 -5.9853E-05 -2.8805E-08 481.266223093594 486.269986817627 85.152 0.53401 85.152 84.945 85.479 0 157 45 6 0 0 0 0.011011 1 52322 70.912 50.431 1 1.8165 1.975 0 28624000 9667700 18956000 3756 1561 1382 1424 5934 5934 AVPVWDVLASGYVSGAAR 18 0 1 Unmodified _AVPVWDVLASGYVSGAAR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 915.1312 2 909.480868 1816.94718 63775.88 0.79553 0.00072352 0.29076 0.00026444 1.0863 0.00098796 909.982778264706 914.48500229974 123.1 0.61807 123.1 122.84 123.46 7.6294E-06 246 48 9 0 0 0 0.051298 1 79616 33.204 33.204 1 2.2023 2.2647 0 25170000 7062700 18107000 3757 397;1622 1383 1425 5935 5935 AVPVWDVLASGYVSGAAR 18 0 1 Unmodified _AVPVWDVLASGYVSGAAR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 915.1326 2 909.480868 1816.94718 64233.23 0.81939 0.00074522 0.1694 0.00015406 0.98878 0.00089928 909.982394772116 914.48479158742 122.61 0.60368 122.61 122.34 122.95 0 266 48 9 0 0 0 0.0051708 1 81233 50.562 50.562 1 2.4357 2.6063 0 25013000 7553100 17460000 3758 397;1622 1383 1425 5936 5936 AVPVWDVLASGYVSGAAR 18 0 1 Unmodified _AVPVWDVLASGYVSGAAR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 914.9861 2 909.480868 1816.94718 66086.17 0.73794 0.00067115 -0.89458 -0.0008136 -0.15664 -0.00014246 909.480980194839 914.483418237382 134.53 0.25238 134.53 134.37 134.62 0 25 9 5 0 0 0 0.0080922 1 82194 30.961 30.961 1 1.9946 1.6319 0 13465000 4833400 8631400 3759 397;1622 1383 1425 5937 5937 AVPVWDVLASGYVSR 15 0 1 Unmodified _AVPVWDVLASGYVSR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.9373 2 809.933022 1617.85149 66467.83 1.0692 0.00086602 0.29161 0.00023619 1.3609 0.0011022 809.933170275226 814.937415973094 121.66 0.69511 121.66 121.32 122.02 -7.6294E-06 165 45 6 0 0 0 0.0002205 2 78534 62.14 62.14 1 1.8674 1.9281 0 20053000 7123000 12930000 3760 397;1622 1384 1426 5938;5939 5938 AVPVWDVLASGYVSR 15 0 1 Unmodified _AVPVWDVLASGYVSR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.9376 2 809.933022 1617.85149 65942.78 0.88265 0.00071489 0.22156 0.00017945 1.1042 0.00089434 809.933227069092 814.937184890299 121.14 0.59431 121.14 120.9 121.5 -7.6294E-06 136 37 6 0 0 0 5.0188E-06 1 80082 96.745 88.232 1 1.8996 1.995 0 22979000 8331000 14648000 3761 397;1622 1384 1426 5940 5940 AVPVWDVLASGYVSR 15 0 1 Unmodified _AVPVWDVLASGYVSR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 814.9382 2 809.933022 1617.85149 NaN NaN NaN 0.32671 0.00026461 NaN NaN NaN NaN 133.98 0.4061 133.98 133.72 134.12 0 0 0 0 0.0024823 1 81637 62.924 53.237 1 NaN NaN 0 3054500 0 3054500 3762 397;1622 1384 1426 5941 5941 AVPVWDVLASGYVSR 15 0 1 Unmodified _AVPVWDVLASGYVSR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 814.9385 2 809.933022 1617.85149 68565.97 1.1762 0.00095268 0.15156 0.00012275 1.3278 0.0010754 810.435422937609 814.9372261904 133.71 0.66595 133.71 133.31 133.98 0 75 27 6 0 0 0 0.027554 1 80534 28.327 28.327 1 1.9223 1.6516 0 3358800 1284300 2074500 3763 397;1622 1384 1426 5942 5942 AVQAFVDGSAIQVLK 15 1 0 Unmodified _AVQAFVDGSAIQVLK_ 0 0 0 A0A024R3V0;Q9NUQ6;C9JKE4;F8VZ02;F8VT91;C9JGM8;F8W6C2;C9IZC3;C9J8M7;F2Z2S1;C9JW67 A0A024R3V0 A0A024R3V0 DNAPTP6;SPATS2L SPATS2-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 777.9452 2 773.435398 1544.85624 70924.79 0.68964 0.00053339 0.92253 0.00071352 1.6122 0.0012469 773.435288769914 777.444079857512 117.42 0.37276 117.42 117.26 117.64 0 69 16 6 0 0 0 0.027419 1 68326 28.379 28.379 1 1.1562 0.9456 0 4786200 1923400 2862800 3764 141 1385 1427 5943 5943 AVQFFVQALR 10 0 1 Unmodified _AVQFFVQALR_ 0 0 0 B4DKK3;B7Z9W6;Q59EH7;Q99615;K7EPP7;K7ESP1;A8K4T2;K7EIH8 B4DKK3 B4DKK3 DNAJC7 DnaJ homolog subfamily C member 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.8367 2 589.837665 1177.66078 80595.77 0.82233 0.00048504 -0.2985 -0.00017607 0.52383 0.00030898 589.837406689824 594.841869245373 104.63 0.72655 104.63 104.3 105.03 0 165 61 4 0 0 0 0.0036479 1 64582 63.565 32.261 1 1.059 1.0763 0 7426500 3583700 3842900 3765 990 1386 1428 5944 5944 AVQFFVQALR 10 0 1 Unmodified _AVQFFVQALR_ 0 0 0 B4DKK3;B7Z9W6;Q59EH7;Q99615;K7EPP7;K7ESP1;A8K4T2;K7EIH8 B4DKK3 B4DKK3 DNAJC7 DnaJ homolog subfamily C member 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.8382 2 589.837665 1177.66078 80311.37 0.41944 0.0002474 -0.074676 -4.4046E-05 0.34476 0.00020335 589.837582947464 594.841897522624 103.71 0.64973 103.71 103.45 104.1 0 190 56 4 0 0 0 0.0011608 1 65585 75.213 43.984 1 1.1104 1.1191 0 10597000 4422100 6175400 3766 990 1386 1428 5945 5945 AVQGAQQPSLYQIR 14 0 1 Unmodified _AVQGAQQPSLYQIR_ 0 0 0 B4DIX0;Q13045;Q59H95 B4DIX0 B4DIX0 FLII Protein flightless-1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.4222 2 779.920446 1557.82634 72211.73 0.64788 0.0005053 -0.51259 -0.00039978 0.13529 0.00010552 779.919761067511 784.924620166697 66.027 0.39761 66.027 65.82 66.218 0 103 37 4 0 0 0 0.0083891 1 38045 38.783 38.783 1 1.6412 1.6339 0 8571100 3345800 5225300 3767 984 1387 1429 5946 5946 AVQGAQQPSLYQIR 14 0 1 Unmodified _AVQGAQQPSLYQIR_ 0 0 0 B4DIX0;Q13045;Q59H95 B4DIX0 B4DIX0 FLII Protein flightless-1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.9205 2 779.920446 1557.82634 70507.78 0.4904 0.00038247 -0.21137 -0.00016485 0.27903 0.00021762 779.919823143052 784.924278080592 64.878 0.37268 64.878 64.689 65.062 0 76 30 5 0 0 0 3.6016E-06 2 38287 102.05 102.05 1 1.7369 1.755 0 9925000 3683500 6241500 3768 984 1387 1429 5947;5948 5948 AVQGAQQPSLYQIR 14 0 1 Unmodified _AVQGAQQPSLYQIR_ 0 0 0 B4DIX0;Q13045;Q59H95 B4DIX0 B4DIX0 FLII Protein flightless-1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.9226 2 779.920446 1557.82634 72376.6 0.45775 0.00035701 0.1996 0.00015567 0.65735 0.00051268 779.920673699075 784.924365047673 76.318 0.40097 76.318 76.146 76.547 0 57 26 4 0 0 0 0.043086 1 39913 27.431 27.431 1 2.3303 2.0427 0 1330500 509490 821030 3769 984 1387 1429 5949 5949 AVQYNEPLK 9 1 0 Unmodified _AVQYNEPLK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.2859 2 531.284931 1060.55531 83867.81 0.78724 0.00041825 0.12777 6.7881E-05 0.915 0.00048613 531.284850175302 535.291920564094 38.175 0.61291 38.175 37.923 38.536 0 249 51 8 0 0 0 2.5503E-05 2 19551 113.5 88.576 1 1.0575 1.1787 0 61705000 32434000 29272000 3770 1741 1388 1430 5950;5951 5950 AVQYNEPLK 9 1 0 Unmodified _AVQYNEPLK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.2924 2 531.284931 1060.55531 83091.69 0.30056 0.00015968 0.081831 4.3475E-05 0.38239 0.00020316 531.284951403558 535.292009405133 37.336 0.49653 37.336 37.079 37.575 0 147 40 4 0 0 0 0.0001673 2 19373 107.66 88.889 1 1.1139 1.2451 0 101900000 53179000 48718000 3771 1741 1388 1430 5952;5953 5952 AVQYNEPLK 9 1 0 Unmodified _AVQYNEPLK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.2922 2 531.284931 1060.55531 82792.32 0.42704 0.00022688 -0.18098 -9.6154E-05 0.24606 0.00013073 531.284751082234 535.291879083796 43.648 0.57142 43.648 43.374 43.946 3.8147E-06 176 39 6 0 0 0 0.0016071 2 20558 83.206 71.159 1 1.3813 1.0726 0 14700000 6173400 8526600 3772 1741 1388 1430 5954;5955 5955 AVQYNEPLK 9 1 0 Unmodified _AVQYNEPLK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.2919 2 531.284931 1060.55531 82652.77 0.38744 0.00020584 -0.27328 -0.00014519 0.11416 6.0652E-05 531.284733441532 535.291855408951 43.752 0.85014 43.752 43.457 44.307 0 208 56 6 0 0 0 0.00050627 3 20093 98.299 97.798 1 1.3961 1.1516 0 11081000 4537900 6543200 3773 1741 1388 1430 5956;5957;5958 5956 AVREPPEDEEEEDGREK 17 1 2 Unmodified _AVREPPEDEEEEDGREK_ 0 0 2 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3058 3 671.971379 2012.89231 72606.35 0.45518 0.00030587 -0.30052 -0.00020194 0.15466 0.00010393 671.971337933511 681.314196359359 17.131 0.40193 17.131 16.905 17.307 0 52 11 6 0 0 0 7.2537E-05 2 4253 58.688 56.819 1 0.809 0.87579 0 9820900 5573100 4247800 3774 1887 1389 1431 5959;5960 5959 AVREPPEDEEEEDGREK 17 1 2 Unmodified _AVREPPEDEEEEDGREK_ 0 0 2 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.972 3 671.971379 2012.89231 74030.45 0.93872 0.00063079 0.37521 0.00025213 1.3139 0.00088293 671.971772392746 681.314872214751 16.952 0.46099 16.952 16.748 17.209 0 88 15 9 0 0 0 4.3018E-07 2 3955 107.73 100.6 1 0.86151 0.96795 0 14243000 7494500 6749000 3775 1887 1389 1431 5961;5962 5961 AVREPPEDEEEEDGREK 17 1 2 Unmodified _AVREPPEDEEEEDGREK_ 0 0 2 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.2305 4 504.230353 2012.89231 83768.66 0.6925 0.00034918 -0.076321 -3.8483E-05 0.61618 0.0003107 504.230244075731 511.237879551788 16.968 0.6857 16.968 16.748 17.434 0 98 22 8 0 0 0 0.0035117 2 3994 22.435 22.435 1 0.99115 1.1098 0 8997900 4255000 4742900 3776 1887 1389 1431 5963;5964 5964 AVSEEQQPALK 11 1 0 Unmodified _AVSEEQQPALK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8;A0PJ72;F5GYK6 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.3184 2 600.31696 1198.61937 NaN NaN NaN -0.045078 -2.7061E-05 NaN NaN NaN NaN 27.037 0.40068 27.037 26.876 27.276 0 0 0 0 1.9044E-16 1 12273 139.74 114.8 1 NaN NaN 0 21290000 21290000 0 3777 1926 1390 1432 5965 5965 AVSEEQQPALK 11 1 0 Unmodified _AVSEEQQPALK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8;A0PJ72;F5GYK6 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.3179 2 600.31696 1198.61937 78051.19 0.66753 0.00040073 -0.45914 -0.00027563 0.20839 0.0001251 600.316647503681 604.323585046179 26.677 0.30121 26.677 26.485 26.786 1.9073E-06 65 14 6 0 0 0 1.3453E-16 2 12000 151.44 151.44 1 0.75537 0.79185 0 34669000 19990000 14680000 3778 1926 1390 1432 5966;5967 5966 AVSEEQQPALK 11 1 0 Unmodified _AVSEEQQPALK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8;A0PJ72;F5GYK6 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 600.3171 2 600.31696 1198.61937 77878.59 0.40478 0.000243 -0.20373 -0.0001223 0.20105 0.00012069 600.316936250353 604.323458337034 30.638 0.36368 30.638 30.439 30.803 0 116 24 6 0 0 0 0.015176 1 12703 46.462 46.462 1 0.617 0.48913 0 4715400 2815300 1900100 3779 1926 1390 1432 5968 5968 AVSEEQQPALK 11 1 0 Unmodified _AVSEEQQPALK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8;A0PJ72;F5GYK6 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.3175 2 600.31696 1198.61937 78714.69 0.40691 0.00024427 0.49916 0.00029965 0.90607 0.00054393 600.316695876532 604.324756939256 30.791 0.36065 30.791 30.59 30.951 1.9073E-06 88 18 7 0 0 0 0.011331 1 12307 48.423 48.423 1 0.69684 0.56283 0 4325100 2609100 1716000 3780 1926 1390 1432 5969 5969 AVSELELLGFIK 12 1 0 Unmodified _AVSELELLGFIK_ 0 0 0 B4E014;Q9UBD5 B4E014 B4E014 ORC3 Origin recognition complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.8849 2 659.884478 1317.7544 77183.14 0.9032 0.00059601 -0.21795 -0.00014382 0.68525 0.00045219 659.884448043325 663.891481993165 125.19 0.53051 125.19 124.98 125.51 0 126 34 6 0 0 0 0.00019628 2 81301 90.15 76.773 1 1.2208 1.2403 0 6291600 2919200 3372400 3781 1058 1391 1433 5970;5971 5970 AVSELELLGFIK 12 1 0 Unmodified _AVSELELLGFIK_ 0 0 0 B4E014;Q9UBD5 B4E014 B4E014 ORC3 Origin recognition complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.8855 2 659.884478 1317.7544 75354.86 1.0603 0.0006997 -0.20484 -0.00013517 0.8555 0.00056453 659.884369854602 663.891455598239 124.74 0.46845 124.74 124.52 124.99 7.6294E-06 142 32 7 0 0 0 0.00022365 2 82942 74.162 64.456 1 1.3076 1.3194 0 7961700 3538200 4423500 3782 1058 1391 1433 5972;5973 5972 AVSGYSDQVVHQR 13 0 1 Unmodified _AVSGYSDQVVHQR_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6;H0YMN5 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.3097 3 482.575907 1444.70589 88213.78 0.43622 0.00021051 -0.025678 -1.2392E-05 0.41054 0.00019812 482.575744844638 485.912026967809 25.612 0.31816 25.612 25.441 25.759 0 53 16 5 0 0 0 0.026577 1 11235 28.053 26.04 1 0.61484 0.60301 0 13916000 7989100 5926600 3783 288 1392 1434 5974 5974 AVSISTEPPTYLR 13 0 1 Unmodified _AVSISTEPPTYLR_ 0 0 0 Q9H836;G5E975;Q12824;Q86WI8;A0A0U1RQQ2;Q86WI7;A0A0U1RRB8;C9JTA6;A0A0G2JSE9;B4E117;B4DRT1 Q9H836 Q9H836 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.3873 2 717.385374 1432.75619 NaN NaN NaN 0.52892 0.00037944 NaN NaN NaN NaN 82.089 0.72411 82.089 81.709 82.433 0 0 0 0 1.5942E-06 1 48922 104.52 84.761 1 NaN NaN 0 14012000 14012000 0 3784 1276 1393 1435 5975 5975 AVSTVVVTTAPSPK 14 1 0 Unmodified _AVSTVVVTTAPSPK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.8976 2 678.890292 1355.76603 79516.17 0.4935 0.00033503 -0.17768 -0.00012063 0.31582 0.00021441 678.890115243001 682.89705144534 58.589 0.3348 58.589 58.423 58.758 0 89 27 5 0 0 0 1.7583E-09 1 33218 118.9 101.04 1 0.89401 0.88931 0 8026900 3998600 4028300 3785 135 1394 1436 5976 5976 AVSTVVVTTAPSPK 14 1 0 Unmodified _AVSTVVVTTAPSPK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.8906 2 678.890292 1355.76603 77589.26 0.619 0.00042023 0.03789 2.5723E-05 0.65689 0.00044596 678.890323676712 682.897512113203 57.462 0.26129 57.462 57.353 57.615 -3.8147E-06 85 22 5 0 0 0 2.7399E-09 1 33274 115.33 97.462 1 0.80406 0.81708 0 12683000 6265100 6418400 3786 135 1394 1436 5977 5977 AVSTVVVTTAPSPK 14 1 0 Unmodified _AVSTVVVTTAPSPK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.8993 2 678.890292 1355.76603 74903.47 0.56549 0.00038391 0.52059 0.00035342 1.0861 0.00073733 679.392129989151 682.897803911717 67.832 0.43938 67.832 67.657 68.096 0 88 28 5 0 0 0 0.00019054 1 35354 70.685 53.659 1 2.3895 2.0194 0 1995900 588620 1407300 3787 135 1394 1436 5978 5978 AVTDFVIPECQK 12 1 0 Unmodified _AVTDFVIPECQK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 703.8547 2 703.852852 1405.69115 NaN NaN NaN 0.97754 0.00068805 NaN NaN NaN NaN 96.102 0.52705 96.102 95.859 96.386 0 0 0 0 0.005878 1 53880 61.353 61.353 1 NaN NaN 0 1518500 1518500 0 3788 1849 1395 1437 5979 5979 AVTDFVIPECQK 12 1 0 Unmodified _AVTDFVIPECQK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.8533 2 703.852852 1405.69115 NaN NaN NaN 1.0032 0.0007061 NaN NaN NaN NaN 96.086 0.52518 96.086 95.819 96.344 0 0 0 0 0.018103 1 53050 51.927 41.097 1 NaN NaN 0 1451500 1451500 0 3789 1849 1395 1437 5980 5980 AVTELNEPLSNEDR 14 0 1 Unmodified _AVTELNEPLSNEDR_ 0 0 0 A0A024R1K7;Q04917 A0A024R1K7 A0A024R1K7 YWHAH 14-3-3 protein eta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.892 2 793.886466 1585.75838 68485.16 0.67123 0.00053288 -1.335 -0.0010598 -0.66378 -0.00052696 794.384653227745 798.890697425694 58.874 0.42519 58.874 58.698 59.123 3.8147E-06 130 33 6 0 0 0 0.00011297 3 33431 83.045 74.913 1 1.6233 1.6981 0 12946000 3622800 9323000 3790 78 1396 1438 5981;5982;5983 5982 AVTELNEPLSNEDR 14 0 1 Unmodified _AVTELNEPLSNEDR_ 0 0 0 A0A024R1K7;Q04917 A0A024R1K7 A0A024R1K7 YWHAH 14-3-3 protein eta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.8906 2 793.886466 1585.75838 67866.05 0.80772 0.00064124 0.34395 0.00027306 1.1517 0.0009143 793.886667573752 798.890716963243 57.905 0.40547 57.905 57.676 58.081 0 84 33 4 0 0 0 3.9623E-07 2 33528 111.52 103.45 1 1.602 1.5752 0 13470000 4370100 9099800 3791 78 1396 1438 5984;5985 5984 AVTEQGAELSNEER 14 0 1 Unmodified _AVTEQGAELSNEER_ 0 0 0 P27348;E9PG15;Q53RR5 P27348 P27348 YWHAQ 14-3-3 protein theta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.8624 2 766.862991 1531.71143 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.734 1 30.734 30.234 31.234 0 0 0 0 0.0010294 1 15070 77.062 52.771 1 3792 1523 1397 1439 5986 5986 AVTEQGAELSNEER 14 0 1 Unmodified _AVTEQGAELSNEER_ 0 0 0 P27348;E9PG15;Q53RR5 P27348 P27348 YWHAQ 14-3-3 protein theta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.8693 2 766.862991 1531.71143 69367.13 0.36963 0.00028345 0.14568 0.00011171 0.5153 0.00039517 767.3644226119 771.86731634082 30.44 0.61567 30.44 30.037 30.653 0 163 52 5 0 0 0 6.8812E-07 1 14687 110.66 83.333 1 2.2775 2.3411 0 21233000 6893700 14340000 3793 1523 1397 1439 5987 5987 AVTEQGHELSNEER 14 0 1 Unmodified _AVTEQGHELSNEER_ 0 0 0 V9HWD6;P31946;B5BU24;Q4VY20;A0A0J9YWZ2;Q4VY19;A0A0J9YWE8;Q59EQ2 V9HWD6 V9HWD6 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.9221 3 533.585019 1597.73323 85933.08 0.47463 0.00025325 0.63468 0.00033866 1.1093 0.00059191 534.253595896133 536.921415902272 19.797 0.2679 19.797 19.627 19.894 0 42 14 6 0 0 0 0.019704 1 6331 23.489 16.45 1 0.44598 0.46574 0 10601000 5543600 5057500 3794 1536 1398 1440 5988 5988 AVTEQGHELSNEER 14 0 1 Unmodified _AVTEQGHELSNEER_ 0 0 0 V9HWD6;P31946;B5BU24;Q4VY20;A0A0J9YWZ2;Q4VY19;A0A0J9YWE8;Q59EQ2 V9HWD6 V9HWD6 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.8785 2 799.87389 1597.73323 NaN NaN NaN 0.31345 0.00025072 NaN NaN NaN NaN 19.814 0.16655 19.814 19.692 19.859 0 0 0 0 3.4622E-42 1 6281 162.22 128.26 1 NaN NaN 0 4865000 0 4865000 3795 1536 1398 1440 5989 5989 AVTEQGHELSNEER 14 0 1 Unmodified _AVTEQGHELSNEER_ 0 0 0 V9HWD6;P31946;B5BU24;Q4VY20;A0A0J9YWZ2;Q4VY19;A0A0J9YWE8;Q59EQ2 V9HWD6 V9HWD6 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.8736 2 799.87389 1597.73323 67109.31 0.32539 0.00026027 0.59606 0.00047677 0.92145 0.00073704 799.874663920677 804.878451532528 19.591 0.24797 19.591 19.441 19.689 0 47 12 7 0 0 0 0.00014791 2 5975 77.124 77.124 1 2.0054 1.9922 0 7363900 2146800 5217100 3796 1536 1398 1440 5990;5991 5991 AVTEQGHELSNEER 14 0 1 Unmodified _AVTEQGHELSNEER_ 0 0 0 V9HWD6;P31946;B5BU24;Q4VY20;A0A0J9YWZ2;Q4VY19;A0A0J9YWE8;Q59EQ2 V9HWD6 V9HWD6 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.9211 3 533.585019 1597.73323 NaN NaN NaN 1.1468 0.00061189 NaN NaN NaN NaN 19.693 0.36425 19.693 19.421 19.785 0 0 0 0 0.00026749 1 5959 75.669 48.26 1 NaN NaN 0 9938600 0 9938600 3797 1536 1398 1440 5992 5992 AVTEQGHELSNEER 14 0 1 Unmodified _AVTEQGHELSNEER_ 0 0 0 V9HWD6;P31946;B5BU24;Q4VY20;A0A0J9YWZ2;Q4VY19;A0A0J9YWE8;Q59EQ2 V9HWD6 V9HWD6 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.2552 3 533.585019 1597.73323 83841.8 0.061132 3.2619E-05 -0.039459 -2.1055E-05 0.021673 1.1564E-05 533.584517174095 537.255388231706 21.368 0.3593 21.368 21.161 21.521 0 52 15 6 0 0 0 0.021187 1 6029 17.506 13.037 1 0.86923 0.76487 0 895580 488140 407430 3798 1536 1398 1440 5993 5993 AVTETSFNSVNVNGQR 16 0 1 Unmodified _AVTETSFNSVNVNGQR_ 0 0 0 Q8IZT6;B3KWI2 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 866.9276 2 861.923914 1721.83328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.975 1 56.975 56.475 57.475 0 0 0 0 0.0057876 1 32114 51.013 35.474 1 3799 1902 1399 1441 5994 5994 AVTETSFNSVNVNGQR 16 0 1 Unmodified _AVTETSFNSVNVNGQR_ 0 0 0 Q8IZT6;B3KWI2 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.9298 2 861.923914 1721.83328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.109 1 56.109 55.609 56.609 0 0 0 0 0.0044516 1 32232 52.693 33.736 1 3800 1902 1399 1441 5995 5995 AVTGYRDPYTGQSVSLFQALK 21 1 1 Unmodified _AVTGYRDPYTGQSVSLFQALK_ 0 0 1 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.0773 3 767.733975 2300.1801 69645.45 1.1497 0.00088266 0.31859 0.0002446 1.4683 0.0011273 768.068749421411 774.076291731417 115.83 0.30209 115.83 115.7 116 0 31 11 4 0 0 0 0.016417 1 67927 21.616 13.718 1 3.3499 2.8137 0 3305700 844790 2460900 3801 1754 1400 1442 5996 5996 AVTGYRDPYTGQSVSLFQALK 21 1 1 Unmodified _AVTGYRDPYTGQSVSLFQALK_ 0 0 1 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 773.7417 3 767.733975 2300.1801 71767.94 0.93967 0.00072142 -0.12699 -9.7492E-05 0.81269 0.00062393 767.733978953728 774.075455872959 115.64 0.34897 115.64 115.45 115.8 0 44 15 7 0 0 0 0.001372 1 66860 31.067 22.978 1 2.548 2.1998 0 2108900 740150 1368700 3802 1754 1400 1442 5997 5997 AVTVMMDPNSTQR 13 0 1 2 Oxidation (M) _AVTVM(ox)M(ox)DPNSTQR_ AVTVM(1)M(1)DPNSTQR AVTVM(51.44)M(51.44)DPNSTQR 0 2 0 A8K5Y7;Q9HAV4;E2QRM3 A8K5Y7 A8K5Y7 XPO5 Exportin-5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.345 2 741.339783 1480.66501 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.564 1 22.564 22.064 23.064 0 0 0 0 0.011408 1 8622 51.436 30.064 1 3803 754 1401 1443 5998 5998 583;584 AVVEVNIPVESEVNLK 16 1 0 Unmodified _AVVEVNIPVESEVNLK_ 0 0 0 A0A087WSW7;F6XU50;Q6I7N8;A0A0B4J1V9;Q9NRZ9 A0A087WSW7 A0A087WSW7 HELLS Lymphoid-specific helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.9903 2 869.982909 1737.95127 67292.6 0.63876 0.00055571 -0.31967 -0.0002781 0.3191 0.00027761 869.982793216117 873.989456276865 107.61 0.28718 107.61 107.52 107.81 7.6294E-06 74 20 6 0 0 0 0.00167 1 68809 44.193 44.193 1 0.87843 0.87684 0 14854000 7832300 7021300 3804 400 1402 1444 5999 5999 AVVGVVAGGGR 11 0 1 Unmodified _AVVGVVAGGGR_ 0 0 0 P62917;E9PKZ0;E9PKU4;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.2819 2 471.279983 940.545414 86681.18 0.36002 0.00016967 -0.31668 -0.00014925 0.043334 2.0422E-05 471.279939913808 476.283870616881 36.98 1.2341 36.98 36.515 37.749 -3.8147E-06 555 109 9 0 0 0 0.0003772 3 18568 83.265 57.528 1 0.79697 0.94873 0 1721000000 934930000 786110000 3805 1653 1403 1445 6000;6001;6002 6001 AVVGVVAGGGR 11 0 1 Unmodified _AVVGVVAGGGR_ 0 0 0 P62917;E9PKZ0;E9PKU4;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2798 2 471.279983 940.545414 86668.16 0.32341 0.00015241 -0.32275 -0.00015211 0.00065376 3.081E-07 471.279976185862 476.283859919305 36.095 1.3259 36.095 35.678 37.004 0 579 105 10 0 0 0 0.00035426 3 18314 85.064 59.327 1 0.82853 0.979 0 1419300000 777080000 642220000 3806 1653 1403 1445 6003;6004;6005 6004 AVVGVVAGGGR 11 0 1 Unmodified _AVVGVVAGGGR_ 0 0 0 P62917;E9PKZ0;E9PKU4;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 476.2838 2 471.279983 940.545414 86588.13 0.11645 5.4878E-05 -0.2218 -0.00010453 -0.10535 -4.965E-05 471.280036133854 476.283910242413 41.378 1.5133 41.378 41.12 42.634 0 564 116 10 0 0 0 0.00057303 3 19116 74.127 46.603 1 0.88621 0.76904 0 202670000 105760000 96917000 3807 1653 1403 1445 6006;6007;6008 6007 AVVGVVAGGGR 11 0 1 Unmodified _AVVGVVAGGGR_ 0 0 0 P62917;E9PKZ0;E9PKU4;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 476.2846 2 471.279983 940.545414 86696.3 0.026561 1.2518E-05 -0.18608 -8.7694E-05 -0.15952 -7.5177E-05 471.280089303525 476.283906312827 41.409 1.5914 41.409 41.165 42.756 3.8147E-06 534 118 10 0 0 0 0.00057303 3 18570 74.127 46.603 1 0.85843 0.74962 0 154240000 78029000 76208000 3808 1653 1403 1445 6009;6010;6011 6010 AVVIVDDR 8 0 1 Unmodified _AVVIVDDR_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2;A8K525;A0A0S2Z4Z9;Q15233;H7C367;C9IZL7 Q9BSV4;A8K525 A8K525 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.7534 2 443.753267 885.491981 89432.38 0.24005 0.00010652 -0.16618 -7.3742E-05 0.073873 3.2781E-05 443.752983934088 448.757296967731 42.216 0.79416 42.216 41.88 42.674 0 255 61 7 0 0 0 0.0031191 2 22307 97.798 65.863 1 1.4553 1.7229 0 372780000 148810000 223970000 3809 573;1510 1404 1446 6012;6013 6013 AVVIVDDR 8 0 1 Unmodified _AVVIVDDR_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2;A8K525;A0A0S2Z4Z9;Q15233;H7C367;C9IZL7 Q9BSV4;A8K525 A8K525 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.753 2 443.753267 885.491981 89024.5 0.17581 7.8016E-05 -0.60045 -0.00026645 -0.42464 -0.00018844 443.752615170826 448.757146756186 40.848 0.6856 40.848 40.727 41.412 0 189 55 7 0 0 0 0.0019305 3 21892 104.45 58.077 1 1.5561 1.8087 0 375640000 130220000 245420000 3810 573;1510 1404 1446 6014;6015;6016 6015 AVVIVDDR 8 0 1 Unmodified _AVVIVDDR_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2;A8K525;A0A0S2Z4Z9;Q15233;H7C367;C9IZL7 Q9BSV4;A8K525 A8K525 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.7534 2 443.753267 885.491981 90669.91 -0.22092 -9.8034E-05 0.19908 8.8343E-05 -0.02184 -9.6915E-06 443.753152641208 448.757462159726 47.669 0.41608 47.669 47.432 47.848 0 126 29 6 0 0 0 0.013465 1 22532 65.252 35.914 1 1.0234 0.884 0 22840000 12001000 10839000 3811 573;1510 1404 1446 6017 6017 AVVLHPR 7 0 1 Unmodified _AVVLHPR_ 0 0 0 O43660;H0YA24;H0YAA2 O43660 O43660 PLRG1 Pleiotropic regulator 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.2523 2 396.247955 790.481357 NaN NaN NaN 0.39232 0.00015546 NaN NaN NaN NaN 20.464 0.31512 20.464 20.35 20.665 0 0 0 0 0.035946 1 6794 65.263 36.734 1 NaN NaN 0 7873600 0 7873600 3812 1386 1405 1447 6018 6018 AVVLPGR 7 0 1 Unmodified _AVVLPGR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 356.229 2 356.229231 710.443909 101974.5 0.25202 8.9776E-05 -0.014382 -5.1232E-06 0.23764 8.4653E-05 356.229099833235 361.233261213228 38.501 0.70788 38.501 38.096 38.803 0 193 59 4 0 0 0 0.026766 2 19832 74.597 13.272 1 1.3654 1.3932 0 26841000 10805000 16036000 3813 1945 1406 1448 6019;6020 6020 AVVLPGR 7 0 1 Unmodified _AVVLPGR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 361.2336 2 356.229231 710.443909 NaN NaN NaN -0.14669 -5.2255E-05 NaN NaN NaN NaN 37.66 0.72106 37.66 37.225 37.946 -3.8147E-06 0 0 0 0.03244 1 19431 66.994 8.3328 1 NaN NaN 0 20082000 0 20082000 3814 1945 1406 1448 6021 6021 AVVLPGR 7 0 1 Unmodified _AVVLPGR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 356.2291 2 356.229231 710.443909 101033.2 -0.28848 -0.00010277 0.26757 9.5317E-05 -0.020909 -7.4482E-06 356.22922865126 361.233348164886 42.992 0.72916 42.992 42.679 43.408 0 167 45 6 0 0 0 0.042191 1 19668 58.661 22.074 1 2.5889 2.156 0 6261600 1627600 4633900 3815 1945 1406 1448 6022 6022 AVVMPLQLIQEQAASPNAEIHILK 24 1 0 Oxidation (M) _AVVM(ox)PLQLIQEQAASPNAEIHILK_ AVVM(1)PLQLIQEQAASPNAEIHILK AVVM(40.01)PLQLIQEQAASPNAEIHILK 0 1 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q7LE35;I3L306 Q14807 Q14807 KIF22;OBP-2;A-328A3.5 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 880.1555 3 877.150912 2628.43091 67533.17 0.92295 0.00080956 -0.061044 -5.3544E-05 0.8619 0.00075602 877.485491614869 880.156383696347 118.14 0.60303 118.14 117.91 118.51 0 140 35 6 0 0 0 6.0262E-06 1 75683 40.012 37.571 1 1.1056 1.1113 0 9934600 4567900 5366700 3816 1745 1407 1449 6023 6023 1597 AVVVDDYR 8 0 1 Unmodified _AVVVDDYR_ 0 0 0 Q9H6Y2;G3V1J0 Q9H6Y2 Q9H6Y2 WDR55 WD repeat-containing protein 55 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 468.7426 2 468.742899 935.471246 90345.73 0.20478 9.5988E-05 0.5126 0.00024028 0.71738 0.00033627 468.742766761448 473.747051998761 42.876 0.55055 42.876 42.657 43.208 0 132 35 5 0 0 0 0.042651 1 20126 46.426 17.914 1 1.2118 1.0607 0 1852900 719070 1133800 3817 2039 1408 1450 6024 6024 AVVVPAR 7 0 1 Unmodified _AVVVPAR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 356.2292 2 356.229231 710.443909 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.36 1 28.36 27.86 28.86 0 0 0 0 0.029007 1 13368 74.597 31.824 1 3818 2002 1409 1451 6025 6025 AVYTQDCPLAAAK 13 1 0 Unmodified _AVYTQDCPLAAAK_ 0 0 0 P49588;H3BPK7 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.359 2 704.350477 1406.6864 NaN NaN NaN -0.61369 -0.00043225 NaN NaN NaN NaN 54.289 0.32848 54.289 54.198 54.526 0 0 0 0 0.0025929 1 30637 68.657 47.787 1 NaN NaN 0 8838500 0 8838500 3819 1583 1410 1452 6026 6026 AVYTQDCPLAAAK 13 1 0 Unmodified _AVYTQDCPLAAAK_ 0 0 0 P49588;H3BPK7 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.3568 2 704.350477 1406.6864 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.399 1 53.399 52.899 53.899 3.8147E-06 0 0 0 0.00031803 1 30541 88.495 62.936 1 3820 1583 1410 1452 6027 6027 AVYVPFWQK 9 1 0 Unmodified _AVYVPFWQK_ 0 0 0 B4DZG2;A0A024R8C1;Q15361;A0A087WY09 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.3154 2 569.30821 1136.60187 82838.96 0.85257 0.00048538 0.023477 1.3366E-05 0.87605 0.00049874 569.308294338501 573.315101833271 112.93 0.51068 112.93 112.68 113.19 0 70 22 5 0 0 0 0.021697 1 65700 49.358 49.358 1 1.9143 1.5792 0 2353700 849020 1504700 3821 247 1411 1453 6028 6028 AVYVPFWQK 9 1 0 Unmodified _AVYVPFWQK_ 0 0 0 B4DZG2;A0A024R8C1;Q15361;A0A087WY09 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.3156 2 569.30821 1136.60187 84317.2 0.57874 0.00032948 0.2013 0.0001146 0.78004 0.00044408 569.308213352227 573.315187584981 112.69 0.42331 112.69 112.52 112.94 0 76 19 5 0 0 0 0.010523 1 64595 59.205 59.205 1 2.2279 1.7418 0 2093500 652060 1441400 3822 247 1411 1453 6029 6029 AWDFLSENQLQTVNFR 16 0 1 Unmodified _AWDFLSENQLQTVNFR_ 0 0 0 Q96H22;H3BMC7;D3DUK9;H3BMD5 Q96H22 Q96H22 CENPN;C16orf60 Centromere protein N MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 984.2852 2 984.484139 1966.95373 64512.57 0.43145 0.00042475 1.533 0.0015093 1.9645 0.001934 984.988342794371 989.488475405528 119.17 0.33923 119.17 118.95 119.29 7.6294E-06 57 22 4 0 0 0 0.03675 1 78460 36.284 32.132 1 0.51486 0.5204 0 9832700 5792100 4040700 3823 1970 1412 1454 6030 6030 AWEEYYK 7 1 0 Unmodified _AWEEYYK_ 0 0 0 A0A087WTP3;Q92945;M0QYG1;M0R0C6;M0R3J3;M0R251;M0R263 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.7307 2 494.724175 987.433798 NaN NaN NaN 0.18018 8.9142E-05 NaN NaN NaN NaN 48.826 0.59139 48.826 48.627 49.218 -3.8147E-06 0 0 0 0.031834 1 26655 73.039 59.043 1 NaN NaN 0 7202300 0 7202300 3824 403 1413 1455 6031 6031 AWFQTPYATIR 11 0 1 Unmodified _AWFQTPYATIR_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.3503 2 677.351137 1352.68772 75476.73 0.85402 0.00057847 0.40268 0.00027276 1.2567 0.00085123 677.350662705597 682.356078104491 100.43 0.54977 100.43 100.17 100.72 0 144 45 4 0 0 0 0.00032728 1 61535 87.181 87.181 1 1.0983 1.1511 0 12364000 6352600 6011300 3825 503 1414 1456 6032 6032 AWFQTPYATIR 11 0 1 Unmodified _AWFQTPYATIR_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.3562 2 677.351137 1352.68772 75703.01 0.71398 0.00048361 0.71782 0.00048622 1.4318 0.00096983 677.3508859758 682.356049786036 99.579 0.53689 99.579 99.337 99.874 0 130 42 4 0 0 0 0.0051068 2 62353 56.81 56.81 1 1.1544 1.1483 0 16322000 6590100 9732100 3826 503 1414 1456 6033;6034 6033 AWFQTPYATIR 11 0 1 Unmodified _AWFQTPYATIR_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.3545 2 677.351137 1352.68772 NaN NaN NaN -0.52433 -0.00035515 NaN NaN NaN NaN 112.68 0.38683 112.68 112.52 112.91 -7.6294E-06 0 0 0 0.040127 1 65470 47.187 40.584 1 NaN NaN 0 2976400 0 2976400 3827 503 1414 1456 6035 6035 AWFQTPYATIR 11 0 1 Unmodified _AWFQTPYATIR_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.3556 2 677.351137 1352.68772 75240.76 0.70729 0.00047908 0.2402 0.0001627 0.94748 0.00064178 677.350740448264 682.355348216121 112.51 0.48065 112.51 112.3 112.78 0 127 24 7 0 0 0 0.040955 2 64413 35.944 35.944 1 1.3256 1.1129 0 4846700 2075400 2771300 3828 503 1414 1456 6036;6037 6036 AWGPGLEGGVVGK 13 1 0 Unmodified _AWGPGLEGGVVGK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.8375 2 613.830037 1225.64552 NaN NaN NaN 0.4196 0.00025757 NaN NaN NaN NaN 77.489 0.55302 77.489 77.22 77.773 0 0 0 0 0.0020397 1 45704 72.006 59.78 1 NaN NaN 0 8657200 0 8657200 3829 1504 1415 1457 6038 6038 AWGPGLEGGVVGK 13 1 0 Unmodified _AWGPGLEGGVVGK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8379 2 613.830037 1225.64552 NaN NaN NaN 0.92065 0.00056512 NaN NaN NaN NaN 76.425 0.52017 76.425 76.177 76.697 0 0 0 0 0.015499 1 46048 50.284 38.058 1 NaN NaN 0 10546000 0 10546000 3830 1504 1415 1457 6039 6039 AWGPGLEGGVVGK 13 1 0 Unmodified _AWGPGLEGGVVGK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.8385 2 613.830037 1225.64552 77408.58 0.57702 0.00035419 -0.17354 -0.00010653 0.40348 0.00024767 614.328496815182 617.838047880374 88.363 0.82967 88.363 87.983 88.812 0 168 51 5 0 0 0 0.037286 1 48708 32.008 32.008 1 0.90756 0.71332 0 3134800 1185800 1949000 3831 1504 1415 1457 6040 6040 AWIPSENIQDITVNIHR 17 0 1 Unmodified _AWIPSENIQDITVNIHR_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.6882 3 669.353318 2005.03812 74468.34 0.82889 0.00055482 0.087018 5.8246E-05 0.91591 0.00061307 669.352209950434 673.023932339492 106.05 0.49971 106.05 105.81 106.31 0 126 35 5 0 0 0 2.2694E-05 1 65735 66.965 66.965 1 1.1554 1.1693 0 15265000 6759200 8506200 3832 1758 1416 1458 6041 6041 AWIPSENIQDITVNIHR 17 0 1 Unmodified _AWIPSENIQDITVNIHR_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.3528 3 669.353318 2005.03812 74147.91 0.781 0.00052277 0.33263 0.00022265 1.1136 0.00074541 669.687541857714 673.023885032377 105.31 0.5061 105.31 105.08 105.59 0 190 34 8 0 0 0 3.6356E-05 1 66786 58.159 54.547 1 1.2085 1.3377 0 42244000 21055000 21190000 3833 1758 1416 1458 6042 6042 AWIPSENIQDITVNIHR 17 0 1 Unmodified _AWIPSENIQDITVNIHR_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.354 3 669.353318 2005.03812 73071.71 0.42497 0.00028445 0.85601 0.00057297 1.281 0.00085742 669.687932416788 673.023963508825 116.95 0.51736 116.95 116.66 117.18 0 121 19 10 0 0 0 6.1933E-05 2 68764 49.559 49.559 1 1.4565 1.1931 0 12927000 5696500 7230100 3834 1758 1416 1458 6043;6044 6043 AWIPSENIQDITVNIHR 17 0 1 Unmodified _AWIPSENIQDITVNIHR_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.0244 3 669.353318 2005.03812 73122.22 0.70599 0.00047256 0.67528 0.000452 1.3813 0.00092456 669.689024559125 673.023908098943 116.74 0.46253 116.74 116.48 116.94 -7.6294E-06 123 19 9 0 0 0 3.2327E-05 3 67749 59.513 59.513 1 1.4833 1.2082 0 12600000 5163800 7436000 3835 1758 1416 1458 6045;6046;6047 6047 AWNDIKK 7 2 0 Unmodified _AWNDIKK_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;Q53G74;B4DMJ2;H3BTP7 P36578 P36578 RPL4 60S ribosomal protein L4 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 445.7567 2 437.742702 873.470852 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.794 1 22.794 22.294 23.294 0 0 0 0 0.046376 1 7017 81.784 52.446 1 3836 1548 1417 1459 6048 6048 AWVEEVRK 8 1 1 Unmodified _AWVEEVRK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.791 2 508.779816 1015.54508 83536.56 0.13363 6.7988E-05 0.92114 0.00046866 1.0548 0.00053665 508.78042530025 517.791568818015 32.853 0.16882 32.853 32.749 32.918 0 35 7 7 0 0 0 0.023839 1 14279 63.48 59.545 1 1.3993 1.2101 0 14543000 5524000 9019000 3837 2000 1418 1460 6049 6049 AYAALAALEK 10 1 0 Unmodified _AYAALAALEK_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;B4DFG4;B4DDF3 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.7971 2 510.78985 1019.56515 83117.22 0.17417 8.8965E-05 0.71018 0.00036275 0.88435 0.00045172 510.790046714956 514.79711342186 74.871 0.31808 74.871 74.743 75.061 0 99 28 5 0 0 0 0.0016591 1 45075 72.643 42.389 1 1.3304 1.4376 0 21917000 8335500 13582000 3838 220 1419 1461 6050 6050 AYAPGGPAYQPVVEAFGTDILHK 23 1 0 Unmodified _AYAPGGPAYQPVVEAFGTDILHK_ 0 0 0 Q13057 Q13057 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.0843 3 801.077742 2400.2114 68060.7 0.89721 0.00071873 -0.25139 -0.00020139 0.64582 0.00051735 801.41124689551 804.083662186741 115.48 0.96645 115.48 115.23 116.19 0 214 61 7 0 0 0 1.1711E-05 1 73603 39.288 39.288 1 1.4881 1.4595 0 20606000 7810800 12795000 3839 1704 1420 1462 6051 6051 AYAPGGPAYQPVVEAFGTDILHK 23 1 0 Unmodified _AYAPGGPAYQPVVEAFGTDILHK_ 0 0 0 Q13057 Q13057 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.0786 3 801.077742 2400.2114 67910.88 0.98701 0.00079067 -0.07015 -5.6195E-05 0.91686 0.00073448 801.41123746768 804.083602456932 114.91 0.43532 114.91 114.7 115.14 7.6294E-06 153 27 8 0 0 0 6.5371E-06 2 74839 43.841 36.963 1 1.247 1.2623 0 29088000 12228000 16860000 3840 1704 1420 1462 6052;6053 6052 AYAPGGPAYQPVVEAFGTDILHK 23 1 0 Unmodified _AYAPGGPAYQPVVEAFGTDILHK_ 0 0 0 Q13057 Q13057 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.4188 3 801.077742 2400.2114 68106.77 0.66327 0.00053133 0.36388 0.0002915 1.0272 0.00082283 801.412032376198 803.749698678858 126.99 0.51553 126.99 126.72 127.24 0 119 21 9 0 0 0 0.0004583 3 76476 33.024 33.024 1 1.1063 0.87276 0 5427600 2330200 3097400 3841 1704 1420 1462 6054;6055;6056 6055 AYAPGGPAYQPVVEAFGTDILHK 23 1 0 Unmodified _AYAPGGPAYQPVVEAFGTDILHK_ 0 0 0 Q13057 Q13057 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 801.0787 3 801.077742 2400.2114 68067.8 0.56088 0.00044931 0.43248 0.00034645 0.99336 0.00079576 801.412700134571 804.083847395982 126.83 0.4157 126.83 126.64 127.05 0 118 18 9 0 0 0 0.00053053 3 75449 32.391 32.391 1 1.2689 1.0382 0 5495000 2843400 2651600 3842 1704 1420 1462 6057;6058;6059 6059 AYDGTTYLPGIVGLNNIK 18 1 0 Unmodified _AYDGTTYLPGIVGLNNIK_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;A0A087WW31 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 959.5174 2 955.006916 1907.99928 61532.73 0.88714 0.00084722 0.1397 0.00013341 1.0268 0.00098063 955.508790454497 959.013878649948 116.94 0.39359 116.94 116.77 117.16 -7.6294E-06 108 27 6 0 0 0 7.4858E-05 1 74760 50.484 42.873 1 0.70099 0.69055 0 19618000 10532000 9085200 3843 1119 1421 1463 6060 6060 AYDGTTYLPGIVGLNNIK 18 1 0 Unmodified _AYDGTTYLPGIVGLNNIK_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;A0A087WW31 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 955.5109 2 955.006916 1907.99928 61995.96 0.65425 0.00062482 0.18534 0.000177 0.83959 0.00080182 955.509191123778 959.514690162695 116.49 0.38849 116.49 116.24 116.63 0 80 24 5 0 0 0 1.04E-07 2 76255 89.266 89.266 1 0.56269 0.56875 0 28713000 18274000 10439000 3844 1119 1421 1463 6061;6062 6061 AYDGTTYLPGIVGLNNIK 18 1 0 Unmodified _AYDGTTYLPGIVGLNNIK_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;A0A087WW31 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 955.5085 2 955.006916 1907.99928 62459.96 0.69493 0.00066366 -0.0046376 -4.429E-06 0.69029 0.00065924 955.507435718835 959.014147248365 128.8 0.63931 128.8 128.6 129.24 0 116 29 8 0 0 0 0.049576 1 77921 21.759 19.619 1 0.73317 0.58131 0 4674200 2493600 2180600 3845 1119 1421 1463 6063 6063 AYDGTTYLPGIVGLNNIK 18 1 0 Unmodified _AYDGTTYLPGIVGLNNIK_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;A0A087WW31 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 955.5099 2 955.006916 1907.99928 62331.68 0.59626 0.00056943 0.71488 0.00068271 1.3111 0.0012521 955.509064031488 959.014725456931 128.63 0.44371 128.63 128.42 128.86 -1.5259E-05 104 17 9 0 0 0 0.056618 1 76922 21.23 15.951 1 0.82176 0.67033 0 5946000 3224900 2721200 3846 1119 1421 1463 6064 6064 AYDIAGSTK 9 1 0 Unmodified _AYDIAGSTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.2412 2 463.234907 924.455261 86207.35 -0.0074248 -3.4394E-06 -0.33353 -0.0001545 -0.34096 -0.00015794 463.23497704866 467.241658490526 27.051 0.71434 27.051 26.851 27.565 1.9073E-06 237 39 9 0 0 0 6.301E-06 2 12325 131.22 82.661 1 0.75798 0.90269 0 644240000 354980000 289270000 3847 1471 1422 1464 6065;6066 6066 AYDIAGSTK 9 1 0 Unmodified _AYDIAGSTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2416 2 463.234907 924.455261 86484.37 0.41949 0.00019432 -0.17848 -8.2677E-05 0.24101 0.00011164 463.234739476197 467.241822631687 26.713 0.57197 26.713 26.54 27.112 -1.9073E-06 143 26 10 0 0 0 3.3036E-06 2 12038 134.48 87.484 1 0.75349 0.88035 0 281260000 157780000 123480000 3848 1471 1422 1464 6067;6068 6067 AYDIAGSTK 9 1 0 Unmodified _AYDIAGSTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 467.2421 2 463.234907 924.455261 87415.27 0.14698 6.8087E-05 0.03819 1.7691E-05 0.18517 8.5778E-05 463.23485497534 467.241917302589 30.361 1.0891 30.361 29.853 30.942 0 316 72 9 0 0 0 0.00055371 2 12508 97.635 58.843 1 1.3457 1.1428 0 61292000 26408000 34884000 3849 1471 1422 1464 6069;6070 6070 AYDIAGSTK 9 1 0 Unmodified _AYDIAGSTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.2419 2 463.234907 924.455261 NaN NaN NaN 0.37071 0.00017172 NaN NaN NaN NaN 30.45 0.66003 30.45 30.252 30.912 1.9073E-06 0 0 0 0.047106 1 12097 47.96 23.328 1 NaN NaN 0 2942400 0 2942400 3850 1471 1422 1464 6071 6071 AYDLAGSCR 9 0 1 Unmodified _AYDLAGSCR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.7318 2 506.729466 1011.44438 NaN NaN NaN 0.96643 0.00048972 NaN NaN NaN NaN 29.13 0.35764 29.13 29.023 29.381 0 0 0 0 1.5944E-11 1 14030 139.97 81.803 1 NaN NaN 0 27510000 27510000 0 3851 1679 1423 1465 6072 6072 AYDLAGSCR 9 0 1 Unmodified _AYDLAGSCR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.7291 2 506.729466 1011.44438 NaN NaN NaN 0.67091 0.00033997 NaN NaN NaN NaN 28.409 0.27572 28.409 28.286 28.562 1.9073E-06 0 0 0 3.4913E-07 1 13562 118.74 57.955 1 NaN NaN 0 18186000 18186000 0 3852 1679 1423 1465 6073 6073 AYDLAGSCR 9 0 1 Unmodified _AYDLAGSCR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7353 2 506.729466 1011.44438 NaN NaN NaN 1.3562 0.00068724 NaN NaN NaN NaN 28.436 0.26487 28.436 28.286 28.551 0 0 0 0 0.015327 1 13580 62.546 27.722 1 NaN NaN 0 11216000 0 11216000 3853 1679 1423 1465 6074 6074 AYDLAGSCR 9 0 1 Unmodified _AYDLAGSCR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.7296 2 506.729466 1011.44438 85897.73 0.16495 8.3586E-05 0.54949 0.00027844 0.71444 0.00036203 506.729524265478 511.734881035967 32.958 0.27643 32.958 32.815 33.092 0 60 15 6 0 0 0 0.0042586 2 14381 69.716 29.513 1 0.966 0.82886 0 8352700 4091400 4261300 3854 1679 1423 1465 6075;6076 6075 AYDLLDK 7 1 0 Unmodified _AYDLLDK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.2226 2 419.221268 836.427984 95357.34 0.32602 0.00013668 0.48417 0.00020297 0.81019 0.00033965 419.2212299733 423.22838458844 53.443 0.57516 53.443 53.245 53.82 0 183 43 8 0 0 0 0.031652 1 29874 66.799 22.985 1 0.94511 1.0683 0 83834000 40132000 43702000 3855 897 1424 1466 6077 6077 AYFTAPR 7 0 1 Unmodified _AYFTAPR_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6;H7C3X9 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.2203 2 413.216321 824.418088 NaN NaN NaN -0.68815 -0.00028436 NaN NaN NaN NaN 41.947 0.3646 41.947 41.745 42.11 -3.8147E-06 0 0 0 0.031834 1 22185 73.039 24.797 1 NaN NaN 0 9158700 0 9158700 3856 1938 1425 1467 6078 6078 AYFTSATMIIAIPTGVK 17 1 0 Oxidation (M) _AYFTSATM(ox)IIAIPTGVK_ AYFTSATM(1)IIAIPTGVK AYFTSATM(59.31)IIAIPTGVK 0 1 0 Q5Q2N8;Q5Q1W2;A0A075X8H6;X2C5C9;A0A059S1Y5;A0A075X6S7;A0A059RPI8;A0A059QPI2;A0A059RP47;A0A1B1PEL1;A0A059QMF7;A0A059QD37;A0A088FSE5;A0A023Q488;C8YAE4;A0A059R5S6;X5D927;X5C9H5;X5BVM8;X5BMX5;X5BDH6;W8DJ92;W8DEK8;W8D226;W0C7W3;V9PAX5;V9N872;V9N3I6;V9JVR4;V9JU54;V9JI12;V9JCG6;V9JAP4;V9J978;V9J4D6;V9J248;V5N397;V5L903;V5JIE7;U5ZA32;U5YWV7;U3LSF4;U3L6G3;U3L439;U3KW58;T2HM13;T2HKF7;T1Q7E3;T1Q4Y6;S4SSZ5;R9Y9M1;R9Y9G2;R9Y6E5;R9Y634;R9Y5G0;R9Y4H6;R9Y445;R9Y438;R9Y3X2;R9Y251;R9Y1Y2;R4IBW8;R4IA65;R4I9P2;Q9B2W6;Q9B2V6;Q9B2V2;Q9B2U9;Q9B2U7;Q9B1K0;Q9B1J9;Q8WCY5;Q8WCX5;Q8WCW6;Q85L11;Q7YEF5;Q7YCF0;Q7YCE3;Q7Y7K9;Q7Y6V6;Q6VLK7;Q6VHV2;Q6RRI3;Q6RNG4;Q6RN73;Q6RMP2;Q6RKZ7;Q5XT74;Q5XS99;Q5XRR7;Q5S9T0;Q4ZF72;Q4VFI9;Q4GVU8;Q4GV90;Q4GUT4;Q4GTJ2;Q4GR21;Q4GKW4;Q4GIJ5;Q4GGC8;Q4GBG2;Q4GAL3;Q4G9M5;Q4G7P9;Q4G7F8;Q4F6E2;Q4F5X3;Q4F563;Q4F387;Q4F2G4;Q4F260;Q4F1M8;Q4F198;Q4EZA9;Q4EWN6;Q305V1;Q2HL32;Q2HKZ3;Q2HKD5;Q15IJ2;Q15HF4;Q0ZEM3;Q0Z7V8;Q0Z7S1;Q0Z7N0;Q0Z7K4;Q0Z7J1;Q0Z7D9;Q0VXC9;N0BWE9;L7Y0W9;L7XYA7;L7XWV6;L7XWN7;L7XVQ8;L7XRG2;L7XRA8;L7XQA3;L7XP46;L7XNU8;L7XKH8;L7XJZ7;L7XIT0;L7XGI1;L7XE69;L7P4C8;J7HAE4;I6TIT6;I3Q9N9;I3Q8N8;I3PXU2;H9TVE6;H9T635;H9T3W8;H9SVK6;H9SMX8;H9SH37;H9SAN8;H9S1H1;H9RVW4;H9RQ17;H9RLZ4;H9RI29;H9REE2;H9R9Z5;H9R6C1;H9R3E4;H9QP91;H9QMQ8;H9QFG0;H9QDP9;H9Q1L1;H9PU09;H9PJX4;H9PJE2;H9P677;H9P3H8;H9NZW7;H9NQR9;H9NNI9;H9MVI2;H9MP07;H9MKW5;H9M4B7;H9M478;H9LP88;H9LP39;H9LNZ7;H9LJV9;H9E7T2;H9E7M1;H9E7I2;H9E7G9;H9E7F6;H9E7E3;H9E7A4;H9E791;H9E778;G9LML2;G9LMG0;G9LLS6;G9LLD3;G9LKS5;G9LKL0;G9LIE3;G9LDZ6;G9LC85;G9C7X1;G5D8R7;G5D8E0;G5D8B4;G5D862;G5D823;G5D810;G3EBF7;G3CA48;G3CA09;G3C9Z6;G3C9Y3;F6N7M2;F2WJ44;F2WIN8;F2WI82;F2WHQ0;F2WG54;F2WEA4;F1CIP8;F1CIE4;F1B7C4;F1AK66;E9LCE9;E9LAX9;E9K944;E9JWI2;E7E4V8;E7E3Z6;E5E215;E5E1W3;E5E1V0;E5E1J6;E5E1I3;E5E1D1;E5E0B7;E5DYE1;E5DY11;E2FQV8;E2FPB2;E2CZ38;D9MZZ6;D9MZK8;D9MZ72;D7PAR1;D7P9P7;D6R6E1;D6R5V9;D6R536;D6N4H5;D6C1N7;D4IH19;D3YSB9;D3YLP1;D2K1K1;D0UTT2;D0UTR9;C9D6C5;C8Y5L7;C8Y372;C8Y359;C8Y0X9;C8XZE6;C7SK85;C7SJV5;C7SDQ5;C7BWV0;C5MMW9;B8X5P0;B8X5M7;B8X558;B8RFT7;B8RC45;B7TD03;B5M7Y6;B4F437;B3GSQ2;B3DEC2;B3DD95;B2XPY6;B2XNF6;B2XM03;B2XLJ8;B2XLI5;B2XLA7;B2XJ80;B2XI93;B2XHY2;B2XH81;B2XGN6;B2XEY0;B2KM44;B2CB36;B1PI08;B1NVJ4;B1NUS1;B1NUB5;B1NTV9;B0Z6V0;B0Z6P8;A8JLF0;A7XSQ0;A7LFE0;A7LEL7;A6ZGQ2;A6ZG99;A6ZFK2;A6ZEY2;A6ZA20;A6Z6U0;A6Z6C1;A6Z5Z1;A6Z1V1;A6Z0P9;A6YZK9;A6YYY8;A6YYA4;A6YV54;A6YV28;A6YU66;A6YTK8;A6NAM9;A4ZLB9;A4ZL80;A3RMP9;A1DTW0;A1DTC8;A1DSF3;A0SCP2;A0A1S6PBY2;A0A1S6NUF8;A0A1S6NS83;A0A1S6NQM8;A0A1S6NFK8;A0A1S6NEP9;A0A1S6MSZ7;A0A1S6MRR5;A0A1S6MR38;A0A1S6MDW5;A0A1L5YTI5;A0A1L1ZH85;A0A1L1ZBL2;A0A1L1ZA99;A0A1J0QWW6;A0A1J0QF44;A0A1I9S094;A0A1B2ALK6;A0A1B1PES1;A0A1B0WVA5;A0A1B0WUZ9;A0A1B0WUV3;A0A1B0W642;A0A1B0W381;A0A1B0VZ80;A0A191ZB55;A0A167L934;A0A141ZRF4;A0A120HFH0;A0A109PUH2;A0A109PQK6;A0A0X9WGC5;A0A0X9U3N0;A0A0X9TTD1;A0A0X9RUR2;A0A0X8DEK3;A0A0S3CSX4;A0A0S2IB02;A0A0N6YPU8;A0A0N6W1U5;A0A0K1MZC4;A0A0K1HQ03;A0A0G2UIR5;A0A0E3M100;A0A0E3JKK4;A0A0E3DJN0;A0A0E3DIC0;A0A0E3D777;A0A0D4WP08;A0A0B6CEA2;A0A0A7HLS2;A0A0A0QPJ2;A0A097QGB7;A0A097Q5Q6;A0A097PZ33;A0A097PVI9;A0A096X2Q6;A0A096X0J8;A0A096WXE1;A0A096WPC6;A0A096WLG7;A0A096WJI6;A0A096WFT6;A0A096WB77;A0A096WB29;A0A096VWL6;A0A075XDJ9;A0A075X739;A0A075X6I9;A0A068C3I7;A0A068C1W5;A0A068BX39;A0A068BQ73;A0A068BMI9;A0A068BLH5;A0A059SAV2;A0A059S9Y2;A0A059S7W0;A0A059S7V7;A0A059RZR9;A0A059RZ56;A0A059RYF2;A0A059RXU6;A0A059RXE8;A0A059RWV5;A0A059RWU6;A0A059RW06;A0A059RVX4;A0A059RVV8;A0A059RVA7;A0A059RV27;A0A059RUX1;A0A059RUQ7;A0A059RUN9;A0A059RUL2;A0A059RUA5;A0A059RU47;A0A059RU17;A0A059RTQ7;A0A059RTQ1;A0A059RTJ2;A0A059RTC9;A0A059RTB8;A0A059RT48;A0A059RT29;A0A059RSZ2;A0A059RSV5;A0A059RSL0;A0A059RSF2;A0A059RSE9;A0A059RSB9;A0A059RS64;A0A059RS27;A0A059RS25;A0A059RRN1;A0A059RRM2;A0A059RR92;A0A059RR08;A0A059RR03;A0A059RQC1;A0A059RQ39;A0A059RQ22;A0A059RPG4;A0A059RP89;A0A059RP35;A0A059RNW4;A0A059RNR8;A0A059RNK4;A0A059RND8;A0A059RM10;A0A059RL15;A0A059RKY1;A0A059RKT6;A0A059RKN3;A0A059RKL5;A0A059RKC0;A0A059RJY6;A0A059RJA5;A0A059RIM1;A0A059RIG5;A0A059RI82;A0A059RI06;A0A059RHU3;A0A059RHT3;A0A059RGQ1;A0A059R9I3;A0A059R9B8;A0A059R8S4;A0A059R2S3;A0A059R1N5;A0A059QZA3;A0A059QXN6;A0A059QXM3;A0A059QX78;A0A059QVS9;A0A059QVB1;A0A059QUZ1;A0A059QSZ9;A0A059QSP8;A0A059QSJ5;A0A059QSI9;A0A059QRD6;A0A059QQY6;A0A059QQF0;A0A059QQA1;A0A059QQ46;A0A059QQ12;A0A059QPW0;A0A059QPV3;A0A059QPP8;A0A059QPM6;A0A059QPB2;A0A059QNK0;A0A059QN30;A0A059QN28;A0A059QN10;A0A059QMX2;A0A059QMT2;A0A059QMS2;A0A059QLZ6;A0A059QLJ3;A0A059QLE2;A0A059QL41;A0A059QL24;A0A059QKK3;A0A059QK68;A0A059QK12;A0A059QJU3;A0A059QJR7;A0A059QJQ9;A0A059QJC8;A0A059QJB7;A0A059QJB6;A0A059QJ43;A0A059QJ22;A0A059QIM3;A0A059QIL9;A0A059QIH8;A0A059QIB6;A0A059QI24;A0A059QHQ8;A0A059QHB6;A0A059QGK2;A0A059QG65;A0A059QFN5;A0A059QF83;A0A059QEX3;A0A059QEM6;A0A059QDH5;A0A059QDC6;A0A059QC55;A0A059QC17;A0A059QBJ1;A0A059QBD7;A0A023RCN6;A0A023R6I9;A0A023R5A9;A0A023QYP8;A0A023QUR1;A0A023QUI5;A0A023QT79;A0A023QT24;A0A023QR89;A0A023QQ48;A0A023QGP7;A0A023QBJ9;A0A023Q8B2;A0A023Q7P2;A0A023Q5F4;A0A023Q552;A0A023Q4U0;A0A023Q4H9;A0A023Q3L7;A0A023Q3I2;A0A023Q2M3;A0A023Q2F1;A0A023I8X8;A0A023I8E0;A0A023I8C2;C7SJD6;C3UPN2;A0S1I7;A0A143FYP4;A0A059RDW3;A0A059QPS5;Q957U9;Q4F4Q7;Q2HKI7;L7XEH5;H9LPH4;F5BAC9;B7TCT8;B2Y9D8;A0A1S6N880;A0A1S6LZ02;A0A059RM34;P00395 Q5Q2N8 Q5Q2N8 COX1;coxI;COI;CO1;cox1;MT-CO1 Cytochrome c oxidase subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.4949 2 900.48423 1798.95391 NaN NaN NaN -0.18851 -0.00016975 NaN NaN NaN NaN 116.57 0.50792 116.57 116.33 116.84 7.6294E-06 0 0 0 0.00040653 1 74382 59.306 41.497 1 NaN NaN 0 9018300 0 9018300 3857 1 1426 1468 6079 6079 0 AYGPGIEPTGNMVK 14 1 0 Oxidation (M) _AYGPGIEPTGNM(ox)VK_ AYGPGIEPTGNM(1)VK AYGPGIEPTGNM(49.35)VK 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.3573 2 725.355759 1448.69697 NaN NaN NaN 0.20111 0.00014588 NaN NaN NaN NaN 48.341 0.26872 48.341 48.152 48.42 0 0 0 0 0.0043711 1 26281 49.35 29.564 1 NaN NaN 0 7231700 7231700 0 3858 1504 1427 1469 6080 6080 1265 AYGPGIEPTGNMVK 14 1 0 Oxidation (M) _AYGPGIEPTGNM(ox)VK_ AYGPGIEPTGNM(1)VK AYGPGIEPTGNM(80.71)VK 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.3641 2 725.355759 1448.69697 72724.75 0.54178 0.00039298 -0.030926 -2.2432E-05 0.51085 0.00037055 725.355914142101 729.362731327261 47.067 0.59238 47.067 46.894 47.486 0 114 46 5 0 0 0 6.1417E-05 1 26009 80.706 72.819 1 1.6494 1.6998 0 18174000 8036100 10138000 3859 1504 1427 1469 6081 6081 1265 AYHEQLSVAEITNACFEPANQMVK 24 1 0 Oxidation (M) _AYHEQLSVAEITNACFEPANQM(ox)VK_ AYHEQLSVAEITNACFEPANQM(1)VK AYHEQLSVAEITNACFEPANQM(87.8)VK 0 1 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;C9JDS9;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 923.1009 3 922.76691 2765.2789 62594.89 0.81947 0.00075618 -0.3275 -0.00030221 0.49197 0.00045397 923.101031031563 925.772319563228 94.246 1.2658 94.246 93.663 94.928 0 789 116 11 0 0 0 4.5467E-16 4 57391 87.802 87.802 1 2.0371 2.2987 0 133950000 55597000 78352000 3860 922;1659;1869 1428 1470 6082;6083;6084;6085 6084 756 AYHEQLSVAEITNACFEPANQMVK 24 1 0 Oxidation (M) _AYHEQLSVAEITNACFEPANQM(ox)VK_ AYHEQLSVAEITNACFEPANQM(1)VK AYHEQLSVAEITNACFEPANQM(126.32)VK 0 1 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;C9JDS9;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 923.1022 3 922.76691 2765.2789 61814.43 0.72249 0.00066669 -0.2153 -0.00019867 0.50719 0.00046802 923.100808660428 925.772315919038 93.068 0.9217 93.068 92.677 93.599 -7.6294E-06 528 79 10 0 0 0 6.1793E-36 1 57628 126.32 126.32 1 1.9672 2.2581 0 169300000 53670000 115630000 3861 922;1659;1869 1428 1470 6086 6086 756 AYHEQLSVAEITNACFEPANQMVK 24 1 0 Oxidation (M) _AYHEQLSVAEITNACFEPANQM(ox)VK_ AYHEQLSVAEITNACFEPANQM(1)VK AYHEQLSVAEITNACFEPANQM(55.05)VK 0 1 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;C9JDS9;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 925.7739 3 922.76691 2765.2789 61809.4 0.67191 0.00062002 -0.10719 -9.8916E-05 0.56472 0.0005211 923.101072126479 925.77243450267 107.22 0.49788 107.22 106.99 107.48 0 215 30 12 0 0 0 2.1274E-09 1 61327 55.051 52.643 1 0.8179 0.68302 0 49477000 27702000 21775000 3862 922;1659;1869 1428 1470 6087 6087 756 AYHEQLSVAEITNACFEPANQMVK 24 1 0 Unmodified _AYHEQLSVAEITNACFEPANQMVK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;C9JDS9;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 920.4419 3 917.435272 2749.28399 NaN NaN NaN -0.48508 -0.00044503 NaN NaN NaN NaN 114.6 0.33047 114.6 114.4 114.73 0 0 0 0 0.050043 1 66986 21.699 14.975 1 NaN NaN 0 8919300 0 8919300 3863 922;1659;1869 1428 1471 6088 6088 AYHEQLTVAEITNACFEPANQMVK 24 1 0 Oxidation (M) _AYHEQLTVAEITNACFEPANQM(ox)VK_ AYHEQLTVAEITNACFEPANQM(1)VK AYHEQLTVAEITNACFEPANQM(67.88)VK 0 1 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532 Q53GA7 Q53GA7 TUBA1C Tubulin alpha-1C chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 927.7745 3 927.438793 2779.29455 62839.42 0.73191 0.0006788 0.1075 9.9701E-05 0.83941 0.0007785 927.773115467129 930.445199673616 94.956 0.93202 94.956 94.585 95.517 0 467 74 9 0 0 0 3.3235E-12 2 57558 67.88 67.88 1 1.693 1.8474 0 50366000 15537000 34829000 3864 1257 1429 1472 6089;6090 6089 962 AYHEQLTVAEITNACFEPANQMVK 24 1 0 Oxidation (M) _AYHEQLTVAEITNACFEPANQM(ox)VK_ AYHEQLTVAEITNACFEPANQM(1)VK AYHEQLTVAEITNACFEPANQM(42.25)VK 0 1 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532 Q53GA7 Q53GA7 TUBA1C Tubulin alpha-1C chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 927.7734 3 927.438793 2779.29455 63134.77 0.52134 0.00048351 0.080556 7.4711E-05 0.6019 0.00055823 928.107330903215 930.444888253843 93.747 0.79729 93.747 93.424 94.221 0 520 69 10 0 0 0 4.6097E-06 1 58135 42.254 42.254 1 1.5943 1.7906 0 74869000 31380000 43489000 3865 1257 1429 1472 6091 6091 962 AYHEQLTVAEITNACFEPANQMVK 24 1 0 Oxidation (M) _AYHEQLTVAEITNACFEPANQM(ox)VK_ AYHEQLTVAEITNACFEPANQM(1)VK AYHEQLTVAEITNACFEPANQM(43.88)VK 0 1 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532 Q53GA7 Q53GA7 TUBA1C Tubulin alpha-1C chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 928.1075 3 927.438793 2779.29455 63346.93 0.74582 0.0006917 -0.31817 -0.00029508 0.42765 0.00039662 927.772816259366 930.444688127317 107.76 0.36182 107.76 107.58 107.94 0 153 18 10 0 0 0 3.5795E-06 1 61746 43.884 43.884 1 0.6845 0.53158 0 14758000 8822100 5936200 3866 1257 1429 1472 6092 6092 962 AYHEQLTVAEITNACFEPANQMVK 24 1 0 Unmodified _AYHEQLTVAEITNACFEPANQMVK_ 0 0 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532 Q53GA7 Q53GA7 TUBA1C Tubulin alpha-1C chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 925.1129 3 922.107155 2763.29964 64159.57 0.53136 0.00048997 -0.26175 -0.00024137 0.2696 0.0002486 922.441625548643 924.777852364374 114.91 0.33504 114.91 114.74 115.07 0 64 15 6 0 0 0 0.015464 1 66373 19.737 19.737 1 1.1844 0.97229 0 5206600 2609200 2597400 3867 1257 1429 1473 6093 6093 AYHMVCLDPDMEK 13 1 0 2 Oxidation (M) _AYHM(ox)VCLDPDM(ox)EK_ AYHM(1)VCLDPDM(1)EK AYHM(51.45)VCLDPDM(51.45)EK 0 2 0 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.8412 2 820.841301 1639.66805 67788.4 0.65827 0.00054033 0.22794 0.0001871 0.8862 0.00072743 820.84084390988 824.848249790196 37.192 0.08083 37.192 37.169 37.25 0 15 5 5 0 0 0 0.0035892 1 19286 51.445 51.445 1 0.75451 0.75194 0 6398700 4076300 2322400 3868 515 1430 1474 6094 6094 365;366 AYHSFLVEPISCHAWNK 17 1 0 Acetyl (Protein N-term) _(ac)AYHSFLVEPISCHAWNK_ 1 0 0 A4D275;O15143;C9JBJ7;C9K057;C9J4Z7;F8VXW2;C9JEY1;C9JQM8;C9JFG9;C9J6C8;C9JM51;F8WEB3;C9JTT6 A4D275 A4D275 ARPC1B Actin-related protein 2/3 complex subunit 1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.6754 3 701.00352 2099.98873 NaN NaN NaN -1.067 -0.00074796 NaN NaN NaN NaN 101.29 0.2509 101.29 101.24 101.49 7.6294E-06 0 0 0 0.0018915 1 63728 43.297 34.366 1 NaN NaN 0 5962500 0 5962500 3869 670 1431 1475 6095 6095 AYILNLVK 8 1 0 Unmodified _AYILNLVK_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2F4;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2991 2 467.292028 932.569503 103942.9 0.536 0.00025047 -0.086385 -4.0367E-05 0.44962 0.0002101 467.291588800861 471.299203775633 91.395 0.74919 91.395 90.917 91.666 7.6294E-06 102 65 4 0 0 0 0.032325 1 56378 58.167 40.874 1 4.7728 4.8384 0 12918000 2731500 10186000 3870 721 1432 1476 6096 6096 AYILVTPLK 9 1 0 Unmodified _AYILVTPLK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.3279 2 509.320786 1016.62702 NaN NaN NaN -0.24899 -0.00012681 NaN NaN NaN NaN 106.78 0.48557 106.78 106.54 107.03 0 0 0 0 0.032349 1 61028 52.716 40.509 1 NaN NaN 0 2625900 0 2625900 3871 1849 1433 1477 6097 6097 AYILVTPLK 9 1 0 Unmodified _AYILVTPLK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.327 2 509.320786 1016.62702 NaN NaN NaN -0.041826 -2.1303E-05 NaN NaN NaN NaN 106.51 0.52576 106.51 106.27 106.8 0 0 0 0 0.038893 1 59928 50.607 43.968 1 NaN NaN 0 2469800 0 2469800 3872 1849 1433 1477 6098 6098 AYIQENLELVEK 12 1 0 Unmodified _AYIQENLELVEK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.8922 2 724.885207 1447.75586 73048.62 0.73532 0.00053303 -0.46266 -0.00033538 0.27266 0.00019765 724.884988120131 728.892046021866 98.703 0.41216 98.703 98.48 98.893 -7.6294E-06 77 23 6 0 0 0 0.018669 1 54928 40.616 15.23 1 1.6651 1.319 0 2009400 522570 1486800 3873 196 1434 1478 6099 6099 AYLEGTCVEWLR 12 0 1 Unmodified _AYLEGTCVEWLR_ 0 0 0 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U3N9E1;M9P9U0 U3N9E1 HLA-A;HLA-C;HLA;HLA-Cw;HLA-A*31;MHC class I HLA-A;HLA-A*0226;HLA-A*33;HLA-A*02;HLA-DQB1;HLA-B;HLA-A2;HLC-C;HLA-B*5501 variant;HLA-CW;HLA-A*0225;HLAC;HLA-Cw*15P;HLA-A*03;HLA C*;HLA-B18;HLA-Cw*07;HLA-B*18 variant;HLA-Cw*0707;HLA-B*4202;HLA-B*1805;HLA-G;HLA -B;HLA-B41;MHC HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain;HLA class I histocompatibility antigen, A-34 alpha chain;HLA class I histocompatibility antigen, A-33 alpha chain;HLA class I histocompatibility antigen, A-31 alpha chain;HLA class I histocompatibility antigen, A-30 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-32 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, B-59 alpha chain;HLA class I histocompatibility antigen, B-55 alpha chain;HLA class I histocompatibility antigen, B-54 alpha chain;HLA class I histocompatibility antigen, Cw-14 alpha chain;HLA class I histocompatibility antigen, Cw-4 alpha chain;HLA class I histocompatibility antigen, Cw-5 alpha chain;HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-8 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;HLA class I histocompatibility antigen, B-42 alpha chain;HLA class I histocompatibility antigen, B-41 alpha chain;HLA class I histocompatibility antigen, B-18 alpha chain;HLA class I histocompatibility antigen, B-14 alpha chain;HLA class I histocompatibility antigen, B-8 alpha chain;HLA class I histocompatibility antigen, B-37 alpha chain;HLA class I histocompatibility antigen, Cw-18 alpha chain;HLA class I histocompatibility antigen, Cw-1 alpha chain MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.8657 2 748.863751 1495.71295 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.45 1 113.45 112.95 113.95 7.6294E-06 0 0 0 0.039769 1 65179 43.77 18.148 1 3874 395;496 1435 1479 6100 6100 AYLFAHAVDFVPSEENNLVGTLK 23 1 0 Unmodified _AYLFAHAVDFVPSEENNLVGTLK_ 0 0 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.4434 3 845.435706 2533.28529 66860.6 0.99844 0.00084412 -0.58062 -0.00049088 0.41782 0.00035324 845.435138987824 848.44025125023 118.89 0.74059 118.89 118.48 119.22 0 135 43 6 0 0 0 0.00024274 2 76187 34.914 34.914 1 0.8336 0.85624 0 12966000 5652300 7313400 3875 1776 1436 1480 6101;6102 6101 AYLFAHAVDFVPSEENNLVGTLK 23 1 0 Unmodified _AYLFAHAVDFVPSEENNLVGTLK_ 0 0 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.4388 3 845.435706 2533.28529 68667.01 1.0737 0.00090775 0.86434 0.00073075 1.938 0.0016385 846.104268266334 848.442822687683 119.32 0.61519 119.32 119.12 119.74 7.6294E-06 101 40 7 0 0 0 0.030548 1 76593 14.944 12.182 1 0.98422 0.97814 0 8079500 4401400 3678100 3876 1776 1436 1480 6103 6103 AYLFAHAVDFVPSEENNLVGTLK 23 1 0 Unmodified _AYLFAHAVDFVPSEENNLVGTLK_ 0 0 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.4413 3 845.435706 2533.28529 68161.95 0.72873 0.00061609 -0.37506 -0.00031709 0.35367 0.00029901 845.769892893455 848.440813262789 118.22 0.94033 118.22 117.87 118.81 7.6294E-06 282 59 8 0 0 0 8.8589E-06 5 77849 41.798 41.798 1 0.98517 1.0193 0 11367000 5763700 5603800 3877 1776 1436 1480 6104;6105;6106;6107;6108 6108 AYLFAHAVDFVPSEENNLVGTLK 23 1 0 Unmodified _AYLFAHAVDFVPSEENNLVGTLK_ 0 0 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.1091 3 845.435706 2533.28529 66078.95 0.72949 0.00061674 0.43394 0.00036686 1.1634 0.00098361 845.770324179094 848.442128672834 130.28 0.5381 130.28 130.04 130.58 0 174 27 11 0 0 0 3.2253E-08 1 78864 55.705 55.705 1 0.72271 0.56221 0 12467000 7729400 4737600 3878 1776 1436 1480 6109 6109 AYLFAHAVDFVPSEENNLVGTLK 23 1 0 Unmodified _AYLFAHAVDFVPSEENNLVGTLK_ 0 0 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.4429 3 845.435706 2533.28529 65452.3 1.0077 0.00085195 0.0059917 5.0656E-06 1.0137 0.00085702 845.769928325219 848.442127133575 130.1 0.5127 130.1 129.8 130.31 0 90 19 8 0 0 0 0.00032228 1 77865 34.217 31.455 1 0.43285 0.34732 0 18455000 13207000 5247800 3879 1776 1436 1480 6110 6110 AYLPVNESFGFTADLR 16 0 1 Unmodified _AYLPVNESFGFTADLR_ 0 0 0 P13639;Q8TA90;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 905.4576 2 900.451776 1798.889 NaN NaN NaN -0.20614 -0.00018562 NaN NaN NaN NaN 117.4 0.82853 117.4 117.19 118.02 7.6294E-06 0 0 0 2.3337E-12 1 75013 106.01 89.375 1 NaN NaN 0 110460000 0 110460000 3880 1478 1437 1481 6111 6111 AYLPVNESFGFTADLR 16 0 1 Unmodified _AYLPVNESFGFTADLR_ 0 0 0 P13639;Q8TA90;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.4575 2 900.451776 1798.889 NaN NaN NaN -0.033615 -3.0269E-05 NaN NaN NaN NaN 116.98 0.8428 116.98 116.67 117.51 0 0 0 0 2.6625E-06 2 76444 84.718 59.926 1 NaN NaN 0 142490000 0 142490000 3881 1478 1437 1481 6112;6113 6112 AYLPVNESFGFTADLR 16 0 1 Unmodified _AYLPVNESFGFTADLR_ 0 0 0 P13639;Q8TA90;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 900.9539 2 900.451776 1798.889 63707.16 0.55536 0.00050007 -0.66412 -0.00059801 -0.10876 -9.7936E-05 900.952402233329 905.455393945421 129.32 0.69817 129.32 129.07 129.77 0 274 31 13 0 0 0 1.5714E-08 2 78179 103.75 103.75 1 2.6037 2.1942 0 28277000 7484600 20792000 3882 1478 1437 1481 6114;6115 6115 AYLPVNESFGFTADLR 16 0 1 Unmodified _AYLPVNESFGFTADLR_ 0 0 0 P13639;Q8TA90;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 900.4517 2 900.451776 1798.889 64199.48 0.61769 0.0005562 -1.0309 -0.00092824 -0.41317 -0.00037204 900.450511863936 905.455426285131 129.25 0.68266 129.25 128.92 129.6 1.5259E-05 201 30 9 0 0 0 0.00015601 2 77158 73.848 73.848 1 2.1251 1.8537 0 34679000 10078000 24601000 3883 1478 1437 1481 6116;6117 6117 AYPAAITILETAQK 14 1 0 Unmodified _AYPAAITILETAQK_ 0 0 0 E7EMW7;O95071 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.4179 2 745.416674 1488.81879 75525.07 0.73127 0.0005451 0.76992 0.00057391 1.5012 0.001119 745.417172808504 749.424151708042 106.38 0.63763 106.38 106.01 106.64 0 97 45 4 0 0 0 0.00085746 1 66005 57.836 57.836 1 1.6349 1.6363 0 7687900 3958200 3729700 3884 1218 1438 1482 6118 6118 AYPLADAHLTK 11 1 0 Unmodified _AYPLADAHLTK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.5524 3 400.552151 1198.63462 93352.8 0.29558 0.0001184 0.079817 3.1971E-05 0.3754 0.00015037 400.552172304211 403.223496896965 49.407 0.77409 49.407 48.989 49.763 0 254 51 9 0 0 0 0.0099592 1 27000 35.594 31.049 1 0.80636 0.94253 0 280490000 156470000 124020000 3885 812 1439 1483 6119 6119 AYPLADAHLTK 11 1 0 Unmodified _AYPLADAHLTK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.3243 2 600.324588 1198.63462 78038.8 0.93973 0.00056415 -0.13169 -7.9055E-05 0.80805 0.00048509 600.324623234039 604.331360695854 49.382 0.64761 49.382 49.131 49.779 -3.8147E-06 256 41 9 0 0 0 0.00013719 2 27009 95.523 85.727 1 0.79121 0.94059 0 574570000 311450000 263120000 3886 812 1439 1483 6120;6121 6121 AYPLADAHLTK 11 1 0 Unmodified _AYPLADAHLTK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.3322 2 600.324588 1198.63462 77639.27 0.19132 0.00011486 0.18983 0.00011396 0.38116 0.00022882 600.324619902427 604.331748546851 47.69 0.65243 47.69 47.5 48.152 3.8147E-06 257 45 10 0 0 0 1.8777E-05 2 26489 105.4 105.4 1 0.76561 0.90415 0 1129500000 640300000 489230000 3887 812 1439 1483 6122;6123 6123 AYPLADAHLTK 11 1 0 Unmodified _AYPLADAHLTK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.5531 3 400.552151 1198.63462 93413.34 -0.26348 -0.00010554 0.27427 0.00010986 0.010789 4.3216E-06 400.55218089566 403.223639633685 47.67 0.50514 47.67 47.5 48.005 -3.8147E-06 226 35 9 0 0 0 0.00032009 1 26529 55.98 55.98 1 0.77322 0.91045 0 468110000 266850000 201260000 3888 812 1439 1483 6124 6124 AYPLADAHLTK 11 1 0 Unmodified _AYPLADAHLTK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 600.3251 2 600.324588 1198.63462 77546.75 0.58179 0.00034926 -0.14434 -8.6652E-05 0.43744 0.00026261 600.324593759581 604.331364632126 56.625 1.4762 56.625 55.729 57.206 0 432 96 10 0 0 0 0.0022273 2 28496 62.005 52.208 1 0.91459 0.78261 0 71356000 36873000 34483000 3889 812 1439 1483 6125;6126 6126 AYPLADAHLTK 11 1 0 Unmodified _AYPLADAHLTK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 400.5522 3 400.552151 1198.63462 94330.4 0.1527 6.1166E-05 -0.089318 -3.5776E-05 0.063386 2.5389E-05 400.552053342411 403.223481715195 56.616 0.79173 56.616 56.3 57.092 0 300 50 8 0 0 0 0.036111 1 28555 20.427 20.427 1 1.0839 0.87845 0 24820000 11319000 13502000 3890 812 1439 1483 6127 6127 AYPLADAHLTK 11 1 0 Unmodified _AYPLADAHLTK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.3321 2 600.324588 1198.63462 78509.18 0.6951 0.00041729 -0.17833 -0.00010705 0.51678 0.00031023 600.324530011557 604.331467530424 56.951 0.94075 56.951 56.591 57.532 -3.8147E-06 380 64 10 0 0 0 0.0088222 1 28128 50.108 50.108 1 0.90017 0.76255 0 61529000 32612000 28918000 3891 812 1439 1483 6128 6128 AYPVSGCFDYLSEDLPDTIHIGGR 24 0 1 Unmodified _AYPVSGCFDYLSEDLPDTIHIGGR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 898.4253 3 894.754999 2681.24317 64199.14 0.49888 0.00044637 -0.090783 -8.1229E-05 0.4081 0.00036515 895.089305258401 898.425625110966 130.52 0.42987 130.52 130.3 130.73 0 146 22 9 0 0 0 0.0011335 2 79044 25.604 25.604 1 1.8538 1.5223 0 12029000 3854000 8174500 3892 2002 1440 1484 6129;6130 6130 AYPVSGCFDYLSEDLPDTIHIGGR 24 0 1 Unmodified _AYPVSGCFDYLSEDLPDTIHIGGR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 898.4276 3 894.754999 2681.24317 64551.07 0.64365 0.00057591 0.33069 0.00029588 0.97434 0.00087179 895.08980898063 898.425833686096 130.29 0.47406 130.29 130.05 130.52 0 117 20 10 0 0 0 1.1304E-05 1 78011 36.9 34.138 1 1.8987 1.5361 0 11651000 4013900 7637600 3893 2002 1440 1484 6131 6131 AYPYSQTGDDK 11 1 0 Unmodified _AYPYSQTGDDK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.7752 2 622.775125 1243.5357 78126.04 0.33584 0.00020915 -0.025769 -1.6049E-05 0.31007 0.0001931 622.775003772698 626.782075459878 23.681 0.49407 23.681 23.46 23.954 -1.9073E-06 111 23 7 0 0 0 0.00090132 1 9516 71.614 50.712 1 0.88867 0.92846 0 29972000 15822000 14149000 3894 836;1683 1441 1485 6132 6132 AYPYSQTGDDK 11 1 0 Unmodified _AYPYSQTGDDK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.7752 2 622.775125 1243.5357 78170.79 0.39255 0.00024447 0.2743 0.00017083 0.66685 0.0004153 622.775190967135 626.782527928707 26.332 0.60479 26.332 26.114 26.718 -1.9073E-06 119 25 8 0 0 0 0.0023522 2 9865 61.78 43.004 1 0.99524 0.79584 0 7062800 3626600 3436200 3895 836;1683 1441 1485 6133;6134 6134 AYQHGGVTGLSQY 13 0 0 Unmodified _AYQHGGVTGLSQY_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;B3KY55;A0A059XG73;A0A059XBJ6;A0A059XAM1 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.8314 2 690.830766 1379.64698 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.469 1 51.469 50.969 51.969 0 0 0 0 0.0041266 1 29191 61.56 52.602 1 3896 231 1442 1486 6135 6135 AYSDPSTGEPATYGELQQR 19 0 1 Unmodified _AYSDPSTGEPATYGELQQR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1035.9762 2 1035.47417 2068.93378 60774.65 0.43029 0.00044556 0.047482 4.9166E-05 0.47778 0.00049472 1035.97527016111 1040.98022884562 59.882 0.60582 59.882 59.529 60.135 -3.8147E-06 224 51 7 0 0 0 2.3767E-22 3 34140 150.11 150.11 1 2.044 2.1026 0 25073000 7591200 17482000 3897 1754 1443 1487 6136;6137;6138 6138 AYSDPSTGEPATYGELQQR 19 0 1 Unmodified _AYSDPSTGEPATYGELQQR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1035.9791 2 1035.47417 2068.93378 60691.45 0.62713 0.00064938 0.26878 0.00027831 0.89591 0.00092769 1035.97548344407 1040.98015506724 59.032 0.67154 59.032 58.67 59.342 0 308 63 8 0 0 0 3.4444E-05 3 34218 70.412 65.333 1 1.9332 2.1133 0 35958000 14696000 21262000 3898 1754 1443 1487 6139;6140;6141 6141 AYSDPSTGEPATYGELQQR 19 0 1 Unmodified _AYSDPSTGEPATYGELQQR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1040.506 2 1035.47417 2068.93378 60322.09 0.12336 0.00012774 -0.017645 -1.827E-05 0.10572 0.00010947 1035.47463410704 1040.97916681133 69.745 0.49918 69.745 69.496 69.996 0 226 46 7 0 0 0 0.049935 1 36679 32.068 32.068 1 2.5793 2.2118 0 8534800 2270700 6264100 3899 1754 1443 1487 6142 6142 AYSDQAIVNLLK 12 1 0 Unmodified _AYSDQAIVNLLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.8768 2 667.86936 1333.72417 NaN NaN NaN -0.13731 -9.1708E-05 NaN NaN NaN NaN 107.42 0.52429 107.42 107.2 107.72 -7.6294E-06 0 0 0 2.4404E-05 1 66864 100.25 74.182 1 NaN NaN 0 9102600 0 9102600 3900 1205 1444 1488 6143 6143 AYSDQAIVNLLK 12 1 0 Unmodified _AYSDQAIVNLLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8704 2 667.86936 1333.72417 78228.48 0.81169 0.0005421 0.26076 0.00017415 1.0724 0.00071626 668.371979342887 671.876328330677 106.8 0.60232 106.8 106.48 107.08 0 176 45 6 0 0 0 0.00019399 4 68030 84.213 76.169 1 2.9851 3.0884 0 18586000 5571900 13014000 3901 1205 1444 1488 6144;6145;6146;6147 6145 AYSDQAIVNLLK 12 1 0 Unmodified _AYSDQAIVNLLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.8759 2 667.86936 1333.72417 NaN NaN NaN -0.35084 -0.00023431 NaN NaN NaN NaN 119.24 0.36037 119.24 119.11 119.47 0 0 0 0 0.037332 1 70590 44.863 28.61 1 NaN NaN 0 1828600 0 1828600 3902 1205 1444 1488 6148 6148 AYSDQAIVNLLK 12 1 0 Unmodified _AYSDQAIVNLLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.8771 2 667.86936 1333.72417 78215.82 0.73206 0.00048892 0.075621 5.0505E-05 0.80768 0.00053942 667.870247077883 671.876124173543 119.04 0.28929 119.04 118.91 119.2 0 24 10 4 0 0 0 0.015647 1 69598 42.743 42.743 1 2.7684 2.2435 0 2632300 668490 1963800 3903 1205 1444 1488 6149 6149 AYSEAHEISK 10 1 0 Unmodified _AYSEAHEISK_ 0 0 0 B4DE78;B3KNB4;P61981;B4DHC4 B4DE78 B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.7825 2 567.774928 1133.5353 NaN NaN NaN 0.57941 0.00032897 NaN NaN NaN NaN 17.553 0.34358 17.553 17.307 17.65 0 0 0 0 9.4977E-12 1 4675 128.27 77.203 1 NaN NaN 0 8159100 0 8159100 3904 912 1445 1489 6150 6150 AYSEAHEISK 10 1 0 Unmodified _AYSEAHEISK_ 0 0 0 B4DE78;B3KNB4;P61981;B4DHC4 B4DE78 B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.7753 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 17.556 1 17.556 17.056 18.056 0 0 0 0 0.011397 1 4695 56.916 32.694 1 3905 912 1445 1489 6151 6151 AYSEAHEISK 10 1 0 Unmodified _AYSEAHEISK_ 0 0 0 B4DE78;B3KNB4;P61981;B4DHC4 B4DE78 B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.7825 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 17.455 1 17.455 16.955 17.955 0 0 0 0 0.00050608 1 4396 71.451 43.926 1 3906 912 1445 1489 6152 6152 AYTDAASLEVHLSTHTVK 18 1 0 Unmodified _AYTDAASLEVHLSTHTVK_ 0 0 0 D3DUR9;Q8TF68;R4GMR4 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.0059 3 648.333812 1941.97961 74300.21 0.53824 0.00034896 0.35489 0.00023009 0.89313 0.00057905 648.668856528643 651.005284234726 77.563 0.51873 77.563 77.348 77.867 0 188 35 9 0 0 0 0.022822 1 41504 19.912 16.418 1 2.0009 1.5909 0 6611400 2257800 4353700 3907 1195 1446 1490 6153 6153 AYTDAASLEVHLSTHTVK 18 1 0 Unmodified _AYTDAASLEVHLSTHTVK_ 0 0 0 D3DUR9;Q8TF68;R4GMR4 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.0055 3 648.333812 1941.97961 75697.65 0.63725 0.00041315 0.094871 6.1508E-05 0.73212 0.00047466 648.668465842662 651.00534116018 77.712 0.46783 77.712 77.484 77.952 0 159 29 8 0 0 0 0.0035302 1 40776 28.083 28.083 1 2.0094 1.6397 0 6285100 2173500 4111600 3908 1195 1446 1490 6154 6154 AYTPPEDLQSR 11 0 1 Unmodified _AYTPPEDLQSR_ 0 0 0 Q8N5N7 Q8N5N7 Q8N5N7 MRPL50 39S ribosomal protein L50, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8121 2 638.812042 1275.60953 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.437 1 42.437 41.937 42.937 0 0 0 0 0.00036279 1 22567 77.677 48.591 1 3909 1912 1447 1491 6155 6155 AYTPPEDLQSR 11 0 1 Unmodified _AYTPPEDLQSR_ 0 0 0 Q8N5N7 Q8N5N7 Q8N5N7 MRPL50 39S ribosomal protein L50, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.8178 2 638.812042 1275.60953 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.571 1 42.571 42.071 43.071 0 0 0 0 0.039138 1 22658 44.863 16.465 1 3910 1912 1447 1491 6156 6156 AYTPPEDLQSR 11 0 1 Unmodified _AYTPPEDLQSR_ 0 0 0 Q8N5N7 Q8N5N7 Q8N5N7 MRPL50 39S ribosomal protein L50, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.8146 2 638.812042 1275.60953 NaN NaN NaN 1.1144 0.00071189 NaN NaN NaN NaN 41.899 0.33466 41.899 41.725 42.06 0 0 0 0 0.018157 1 22566 53.683 48.717 1 NaN NaN 0 5363500 5363500 0 3911 1912 1447 1491 6157 6157 AYTPPEDLQSR 11 0 1 Unmodified _AYTPPEDLQSR_ 0 0 0 Q8N5N7 Q8N5N7 Q8N5N7 MRPL50 39S ribosomal protein L50, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.817 2 638.812042 1275.60953 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.802 1 41.802 41.302 42.302 0 0 0 0 0.00076435 1 22495 71.349 30.32 1 3912 1912 1447 1491 6158 6158 AYVDDTPAEQMK 12 1 0 Oxidation (M) _AYVDDTPAEQM(ox)K_ AYVDDTPAEQM(1)K AYVDDTPAEQM(128.86)K 0 1 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.3165 2 692.308474 1382.6024 73100.77 0.86825 0.0006011 0.17883 0.00012381 1.0471 0.0007249 692.308384358313 696.315744069706 27.242 0.35564 27.242 27.083 27.438 1.9073E-06 77 16 6 0 0 0 6.6621E-13 2 12536 128.86 124.7 1 2.3108 2.2669 0 22766000 7163800 15602000 3913 1454 1448 1492 6159;6160 6160 1157 AYVDDTPAEQMK 12 1 0 Oxidation (M) _AYVDDTPAEQM(ox)K_ AYVDDTPAEQM(1)K AYVDDTPAEQM(73.84)K 0 1 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.3089 2 692.308474 1382.6024 72332.91 1.1207 0.00077586 -0.16134 -0.0001117 0.95935 0.00066417 692.307961181423 696.315520479055 26.832 0.36601 26.832 26.627 26.994 1.9073E-06 70 16 6 0 0 0 0.00011885 1 12211 73.841 64.883 1 2.3918 2.458 0 25323000 6939800 18383000 3914 1454 1448 1492 6161 6161 1157 AYVDDTPAEQMK 12 1 0 Oxidation (M) _AYVDDTPAEQM(ox)K_ AYVDDTPAEQM(1)K AYVDDTPAEQM(53.75)K 0 1 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.3091 2 692.308474 1382.6024 74099.87 0.34186 0.00023667 0.36336 0.00025156 0.70523 0.00048824 692.308414293159 696.316340465206 31.088 0.40322 31.088 30.88 31.283 0 97 22 6 0 0 0 0.0021014 1 13056 53.751 49.597 1 0.6142 0.51091 0 2265000 1244400 1020600 3915 1454 1448 1492 6162 6162 1157 AYVEIEYEQETEPVAK 16 1 0 Unmodified _AYVEIEYEQETEPVAK_ 0 0 0 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 949.9598 2 949.456921 1896.89929 62199.48 0.63607 0.00060392 0.10773 0.00010229 0.7438 0.0007062 949.456852270885 953.464018011208 79.088 0.54034 79.088 78.851 79.392 0 339 49 8 0 0 0 1.2271E-24 4 46993 142.1 142.1 1 0.93498 1.0504 0 69127000 31617000 37510000 3916 2016 1449 1493 6163;6164;6165;6166 6165 AYVEIEYEQETEPVAK 16 1 0 Unmodified _AYVEIEYEQETEPVAK_ 0 0 0 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.9583 2 949.456921 1896.89929 62313.95 0.2723 0.00025853 0.93402 0.00088681 1.2063 0.0011453 949.959314493639 953.464698507429 78.18 0.5434 78.18 77.916 78.459 0 281 47 8 0 0 0 3.7564E-12 4 47534 117.79 117.79 1 1.0269 1.14 0 49106000 24702000 24404000 3917 2016 1449 1493 6167;6168;6169;6170 6169 AYVEIEYEQETEPVAK 16 1 0 Unmodified _AYVEIEYEQETEPVAK_ 0 0 0 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 953.464 2 949.456921 1896.89929 NaN NaN NaN 0.079489 7.5471E-05 NaN NaN NaN NaN 90.8 0.62328 90.8 90.436 91.059 0 0 0 0 3.1593E-18 1 49490 120.57 106.67 1 NaN NaN 0 8152300 0 8152300 3918 2016 1449 1493 6171 6171 AYVSLFMR 8 0 1 Oxidation (M) _AYVSLFM(ox)R_ AYVSLFM(1)R AYVSLFM(69.18)R 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.7622 2 501.757495 1001.50044 85772.32 0.25535 0.00012813 0.30871 0.0001549 0.56407 0.00028302 501.757618660433 506.761663504599 78.534 0.76534 78.534 78.142 78.907 0 279 66 6 0 0 0 0.0056993 2 46560 69.176 69.176 1 1.0944 1.1763 0 47142000 23550000 23592000 3919 515;1701 1450 1494 6172;6173 6172 367 AYVSLFMR 8 0 1 Oxidation (M) _AYVSLFM(ox)R_ AYVSLFM(1)R AYVSLFM(46.43)R 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.7617 2 501.757495 1001.50044 NaN NaN NaN -0.165 -8.279E-05 NaN NaN NaN NaN 89.275 0.69234 89.275 88.869 89.561 0 0 0 0 0.01836 1 49274 46.426 46.426 1 NaN NaN 0 2086400 0 2086400 3920 515;1701 1450 1494 6174 6174 367 AYVSLFMR 8 0 1 Oxidation (M) _AYVSLFM(ox)R_ AYVSLFM(1)R AYVSLFM(45.72)R 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.7617 2 501.757495 1001.50044 86106.83 0.0075848 3.8057E-06 0.26135 0.00013113 0.26893 0.00013494 501.757391100978 506.761634792516 89.144 0.72047 89.144 88.796 89.517 0 151 46 4 0 0 0 0.021605 1 48380 45.718 45.718 1 1.3504 1.1683 0 2701900 1118400 1583500 3921 515;1701 1450 1494 6175 6175 367 AYVSTLMGVPGR 12 0 1 Oxidation (M) _AYVSTLM(ox)GVPGR_ AYVSTLM(1)GVPGR AYVSTLM(90.63)GVPGR 0 1 0 B4DMT5;B3KSH1;O00303;B4DEW9;A0A0D9SEZ9;Q9BX72 B4DMT5 B4DMT5 EIF3F;IFP38 Eukaryotic translation initiation factor 3 subunit F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.8341 2 633.82918 1265.64381 NaN NaN NaN 0.90578 0.00057411 NaN NaN NaN NaN 62.302 0.47751 62.302 62.122 62.599 0 0 0 0 8.7865E-05 1 36546 90.629 78.781 1 NaN NaN 0 5125700 0 5125700 3922 939 1451 1495 6176 6176 767 AYVVLGQFLVLK 12 1 0 Unmodified _AYVVLGQFLVLK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.4137 2 675.413206 1348.81186 73860.7 0.93238 0.00062974 0.049688 3.356E-05 0.98207 0.0006633 675.413299677794 679.420196605023 126.23 1.4428 126.23 125.88 127.33 -7.6294E-06 677 99 10 0 0 0 1.401E-12 4 82541 128.69 128.69 1 0.93186 1.0815 0 244400000 121360000 123040000 3923 181 1452 1496 6177;6178;6179;6180 6180 AYVVLGQFLVLK 12 1 0 Unmodified _AYVVLGQFLVLK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.4138 2 675.413206 1348.81186 77198.67 0.9337 0.00063063 -0.0098554 -6.6565E-06 0.92385 0.00062398 675.413466451502 679.420007308165 127.41 0.71117 127.41 127.27 127.99 -7.6294E-06 108 45 4 0 0 0 0.00020568 1 83123 79.906 79.906 1 0.83882 0.85235 0 4584200 2238600 2345600 3924 181 1452 1496 6181 6181 AYVVLGQFLVLK 12 1 0 Unmodified _AYVVLGQFLVLK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.4208 2 675.413206 1348.81186 NaN NaN NaN -0.10752 -7.262E-05 NaN NaN NaN NaN 142.64 0.44711 142.64 142.45 142.9 0 0 0 0 0.0183 1 90597 51.854 39.629 1 NaN NaN 0 357390 0 357390 3925 181 1452 1496 6182 6182 AYVVLGQFLVLK 12 1 0 Unmodified _AYVVLGQFLVLK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.4208 2 675.413206 1348.81186 74077.41 0.8961 0.00060524 0.076267 5.1512E-05 0.97237 0.00065675 675.413353849523 679.420191988738 125.75 2.24 125.75 125.41 127.65 7.6294E-06 785 141 10 0 0 0 4.6614E-08 5 83687 114.89 114.89 1 0.90009 1.0524 0 289930000 147270000 142660000 3926 181 1452 1496 6183;6184;6185;6186;6187 6184 AYVVLGQFLVLK 12 1 0 Unmodified _AYVVLGQFLVLK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.4142 2 675.413206 1348.81186 76668.49 0.85074 0.0005746 -0.11658 -7.8739E-05 0.73416 0.00049586 675.413228516893 679.419809874765 133.17 0.1501 133.17 133.08 133.23 0 18 4 6 0 0 0 4.2854E-05 2 89382 99.139 99.139 1 0.83475 0.87135 0 10959000 6082800 4876600 3927 181 1452 1496 6188;6189 6189 AYVVLGQFLVLK 12 1 0 Unmodified _AYVVLGQFLVLK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.4133 2 675.413206 1348.81186 78034.01 0.50117 0.0003385 -0.14244 -9.6205E-05 0.35873 0.00024229 675.413051362951 679.420188443619 142.67 0.42619 142.67 142.4 142.83 0 120 43 4 0 0 0 0.0077794 1 92180 48.283 48.283 1 0.83608 0.92873 0 1050300 655420 394910 3928 181 1452 1496 6190 6190 AYVVLGQFLVLK 12 1 0 Unmodified _AYVVLGQFLVLK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.4142 2 675.413206 1348.81186 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128 1 128 127.5 128.5 1.5259E-05 0 0 0 0.006477 1 85520 61.962 45.76 1 3929 181 1452 1496 6191 6191 AYVVLGQFLVLK 12 1 0 Unmodified _AYVVLGQFLVLK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.4211 2 675.413206 1348.81186 73818.4 0.75413 0.00050935 -0.001444 -9.7528E-07 0.75269 0.00050837 675.413279634461 679.420213932905 134.77 0.19745 134.77 134.66 134.86 0 17 3 7 0 0 0 1.0171E-12 1 82472 131.22 126.92 1 0.89198 0.79091 0 336130000 175560000 160570000 3930 181 1452 1496 6192 6192 AYVVLGQFLVLK 12 1 0 Unmodified _AYVVLGQFLVLK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.4136 2 675.413206 1348.81186 74060.53 0.95232 0.00064321 -0.20368 -0.00013757 0.74864 0.00050564 675.413099813841 679.419961465164 134.73 0.18646 134.73 134.63 134.81 0 15 3 7 0 0 0 1.0171E-12 2 81537 131.22 131.22 1 0.93132 0.80508 0 224860000 115290000 109570000 3931 181 1452 1496 6193;6194 6193 CAGPTPEAELQALAR 15 0 1 Unmodified _CAGPTPEAELQALAR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.4041 2 792.395947 1582.77734 NaN NaN NaN 0.036814 2.9171E-05 NaN NaN NaN NaN 95.069 0.52923 95.069 94.908 95.437 7.6294E-06 0 0 0 3.4534E-16 1 57776 128.01 119.43 1 NaN NaN 0 7265500 0 7265500 3932 1750 1453 1497 6195 6195 CAGPTPEAELQALAR 15 0 1 Unmodified _CAGPTPEAELQALAR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.4013 2 792.395947 1582.77734 NaN NaN NaN -0.37935 -0.00030059 NaN NaN NaN NaN 94.421 0.575 94.421 94.073 94.648 0 0 0 0 1.7906E-05 1 58555 89.548 84.234 1 NaN NaN 0 7760700 0 7760700 3933 1750 1453 1497 6196 6196 CAGPTPEAELQALAR 15 0 1 Unmodified _CAGPTPEAELQALAR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.8968 2 792.395947 1582.77734 68269.79 0.76931 0.0006096 -0.066589 -5.2765E-05 0.70272 0.00055683 792.396348116078 797.400554282136 109.07 0.60887 109.07 108.83 109.43 0 152 28 8 0 0 0 0.00013672 2 62695 80.245 80.245 1 1.0273 0.85221 0 11044000 5552300 5491500 3934 1750 1453 1497 6197;6198 6198 CAPMSDLTDLK 11 1 0 Oxidation (M) _CAPM(ox)SDLTDLK_ CAPM(1)SDLTDLK CAPM(54.42)SDLTDLK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.7979 2 633.788863 1265.56317 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.258 1 51.258 50.758 51.758 0 0 0 0 0.0082613 1 28356 54.416 48.635 1 3935 1569 1454 1498 6199 6199 1328 CAPMSDLTDLK 11 1 0 Oxidation (M) _CAPM(ox)SDLTDLK_ CAPM(1)SDLTDLK CAPM(47.19)SDLTDLK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.7955 2 633.788863 1265.56317 76642.63 0.38065 0.00024125 -0.61154 -0.00038759 -0.23089 -0.00014633 633.788754027116 637.796131885878 59.153 0.66541 59.153 58.785 59.45 3.8147E-06 213 52 6 0 0 0 0.0066641 1 30122 47.187 42.491 1 2.4731 2.0262 0 2583300 826700 1756600 3936 1569 1454 1498 6200 6200 1328 CCLTYCFNKPEDK 13 2 0 Unmodified _CCLTYCFNKPEDK_ 0 0 1 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 Q5RKT7 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.37 2 867.86785 1733.72115 66318.32 0.44971 0.00039029 -0.10488 -9.1021E-05 0.34483 0.00029927 868.369216731719 875.881577543101 48.833 0.36134 48.833 48.734 49.095 0 66 28 4 0 0 0 1.5176E-05 2 27445 125.74 121.19 1 0.81103 0.93355 0 25967000 11894000 14073000 3937 891 1455 1499 6201;6202 6202 CCLTYCFNKPEDK 13 2 0 Unmodified _CCLTYCFNKPEDK_ 0 0 1 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 Q5RKT7 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3124 3 578.914326 1733.72115 76877.04 0.4602 0.00026642 -0.4025 -0.00023302 0.0577 3.3404E-05 578.914333092306 584.257094900969 48.841 0.43382 48.841 48.691 49.125 0 229 35 8 0 0 0 0.019955 1 27359 44.457 44.457 1 0.88356 1.026 0 104860000 49807000 55050000 3938 891 1455 1499 6203 6203 CCLTYCFNKPEDK 13 2 0 Unmodified _CCLTYCFNKPEDK_ 0 0 1 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 Q5RKT7 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 578.9144 3 578.914326 1733.72115 76301.93 0.5448 0.00031539 -0.85049 -0.00049236 -0.30569 -0.00017697 578.914180600104 584.256875580947 58.04 0.96315 58.04 57.763 58.726 3.8147E-06 467 73 10 0 0 0 6.2747E-05 2 29479 80.905 80.905 1 0.95799 0.81739 0 17452000 8709100 8742800 3939 891 1455 1499 6204;6205 6205 CCLTYCFNKPEDK 13 2 0 Unmodified _CCLTYCFNKPEDK_ 0 0 1 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 Q5RKT7 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.2574 3 578.914326 1733.72115 77269.95 0.38524 0.00022302 -0.75023 -0.00043432 -0.36499 -0.0002113 578.914213941895 584.256941753216 58.522 1.0855 58.522 58.188 59.273 0 555 84 10 0 0 0 6.6762E-05 2 29085 72.681 72.681 1 0.96262 0.81295 0 10046000 5267900 4777700 3940 891 1455 1499 6206;6207 6206 CDFTQMSQYFK 11 1 0 Oxidation (M) _CDFTQM(ox)SQYFK_ CDFTQM(1)SQYFK CDFTQM(43.31)SQYFK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.8145 2 735.805045 1469.59554 NaN NaN NaN 0.02182 1.6055E-05 NaN NaN NaN NaN 65.298 0.59644 65.298 65.039 65.635 0 0 0 0 0.016583 1 37474 43.308 41.036 1 NaN NaN 0 7437100 0 7437100 3941 1470 1456 1500 6208 6208 1184 CDFTQMSQYFK 11 1 0 Oxidation (M) _CDFTQM(ox)SQYFK_ CDFTQM(1)SQYFK CDFTQM(52.79)SQYFK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.8059 2 735.805045 1469.59554 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.272 1 65.272 64.772 65.772 0 0 0 0 0.0099109 1 37581 52.79 42.266 1 3942 1470 1456 1500 6209 6209 1184 CDFTQMSQYFK 11 1 0 Oxidation (M) _CDFTQM(ox)SQYFK_ CDFTQM(1)SQYFK CDFTQM(84.21)SQYFK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8118 2 735.805045 1469.59554 73222.43 0.66192 0.00048705 0.14791 0.00010883 0.80983 0.00059588 735.805115330275 740.313696399065 64.253 0.54001 64.253 63.961 64.501 0 145 49 4 0 0 0 0.00017689 2 37767 84.213 81.234 1 1.9825 2.0186 0 12367000 4458700 7908700 3943 1470 1456 1500 6210;6211 6210 1184 CDFTQMSQYFK 11 1 0 Oxidation (M) _CDFTQM(ox)SQYFK_ CDFTQM(1)SQYFK CDFTQM(43.77)SQYFK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 736.307 2 735.805045 1469.59554 70583.52 0.53079 0.00039056 -0.21401 -0.00015747 0.31678 0.00023309 735.805071599753 739.812227615251 75.517 0.65099 75.517 75.233 75.884 -7.6294E-06 267 48 8 0 0 0 0.0099092 1 39267 43.77 39.471 1 0.89686 0.73491 0 4999000 2805400 2193500 3944 1470 1456 1500 6212 6212 1184 CEEILHK 7 1 0 Unmodified _CEEILHK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 468.7386 2 464.731477 927.448402 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.323 1 21.323 20.823 21.823 0 0 0 0 0.017962 1 6392 105.12 81.593 1 3945 2103 1457 1501 6213 6213 CEELLEK 7 1 0 Unmodified _CEELLEK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.7246 2 460.723318 919.432083 88141.02 0.52023 0.00023968 -0.26232 -0.00012086 0.25791 0.00011882 460.723213171222 464.730206052974 31.125 0.79165 31.125 30.958 31.75 1.9073E-06 222 73 6 0 0 0 0.01003 1 15303 117.16 61.556 1 1.0375 1.1698 0 129620000 61026000 68595000 3946 1401 1458 1502 6214 6214 CEELLEK 7 1 0 Unmodified _CEELLEK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.7235 2 460.723318 919.432083 87893.96 0.03288 1.5149E-05 -0.019011 -8.7589E-06 0.013869 6.3899E-06 460.723327029068 464.73034194589 30.55 0.51756 30.55 30.433 30.95 0 182 45 6 0 0 0 0.0099531 2 14956 114.78 63.327 1 1.0814 1.2315 0 148880000 72221000 76658000 3947 1401 1458 1502 6215;6216 6215 CEELLEK 7 1 0 Unmodified _CEELLEK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.7232 2 460.723318 919.432083 87338.19 0.23011 0.00010602 -0.48343 -0.00022273 -0.25331 -0.00011671 460.723130020135 464.730108580425 34.98 0.61781 34.98 34.829 35.447 0 231 53 7 0 0 0 0.00077823 2 15521 139.28 68.564 1 1.2347 1.0487 0 61406000 26542000 34865000 3948 1401 1458 1502 6217;6218 6218 CEELLEK 7 1 0 Unmodified _CEELLEK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 460.7232 2 460.723318 919.432083 89668.87 0.27861 0.00012836 -0.33527 -0.00015446 -0.056656 -2.6103E-05 460.723179819996 464.730105864583 35.053 0.7584 35.053 34.897 35.655 0 216 65 7 0 0 0 0.010137 2 15073 120.49 69.032 1 1.2753 1.0738 0 52632000 23145000 29488000 3949 1401 1458 1502 6219;6220 6219 CEGINISGNFYR 12 0 1 Unmodified _CEGINISGNFYR_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;B4DNC8 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.3304 2 715.330076 1428.6456 71071.88 0.50754 0.00036306 -0.41151 -0.00029437 0.096025 6.8689E-05 715.330085444494 720.334245531231 81.238 0.69498 81.238 80.927 81.622 0 275 59 7 0 0 0 1.0829E-12 2 48305 130.79 126.77 1 0.8659 0.88098 0 29769000 15710000 14059000 3950 1558 1459 1503 6221;6222 6221 CEGINISGNFYR 12 0 1 Unmodified _CEGINISGNFYR_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;B4DNC8 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.3312 2 715.330076 1428.6456 71010.19 0.73846 0.00052824 -0.30064 -0.00021506 0.43781 0.00031318 715.330013531401 720.334115976412 80.201 0.58991 80.201 79.979 80.568 0 209 46 6 0 0 0 1.4895E-13 2 48766 136.96 130.92 1 0.81055 0.90355 0 43922000 24780000 19142000 3951 1558 1459 1503 6223;6224 6223 CEGINISGNFYR 12 0 1 Unmodified _CEGINISGNFYR_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;B4DNC8 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.8304 2 715.330076 1428.6456 70541.16 0.72276 0.00051701 0.61313 0.00043859 1.3359 0.0009556 715.330200647531 720.334309677631 93.262 0.76331 93.262 92.994 93.757 0 253 47 8 0 0 0 0.005381 2 51953 51.092 46.938 1 0.73259 0.59929 0 13519000 7850400 5668700 3952 1558 1459 1503 6225;6226 6226 CEGINISGNFYR 12 0 1 Unmodified _CEGINISGNFYR_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;B4DNC8 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 715.8333 2 715.330076 1428.6456 72024.58 0.51716 0.00036994 -0.037013 -2.6476E-05 0.48015 0.00034346 715.330172548144 720.334204772069 93.169 0.74454 93.169 92.929 93.673 0 230 45 9 0 0 0 0.00022008 1 51074 82.831 78.676 1 0.83648 0.68401 0 9141200 4900900 4240300 3953 1558 1459 1503 6227 6227 CEIDPMFQK 9 1 0 Oxidation (M) _CEIDPM(ox)FQK_ CEIDPM(1)FQK CEIDPM(51.35)FQK 0 1 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.2667 2 592.259742 1182.50493 80873.27 0.67348 0.00039888 -0.55083 -0.00032623 0.12266 7.2644E-05 592.259748505573 596.266132538651 46.968 0.41654 46.968 46.683 47.099 -3.8147E-06 99 37 4 0 0 0 0.0093191 1 25977 51.346 51.346 1 1.0153 1.0268 0 8863100 4702900 4160200 3954 740 1460 1504 6228 6228 573 CESAFLSK 8 1 0 Unmodified _CESAFLSK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.2313 2 471.223485 940.432418 87498.72 0.23302 0.0001098 0.047358 2.2316E-05 0.28037 0.00013212 471.223388215665 475.230543803842 35.11 1.5507 35.11 34.337 35.888 -3.8147E-06 524 137 5 0 0 0 0.0021394 3 17828 102.51 72.941 1 0.63594 0.72001 0 100380000 59609000 40773000 3955 1140 1461 1505 6229;6230;6231 6231 CESAFLSK 8 1 0 Unmodified _CESAFLSK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2235 2 471.223485 940.432418 86845.91 0.51023 0.00024043 0.30894 0.00014558 0.81917 0.00038601 471.223474042837 475.230650697486 34.464 1.4 34.464 33.775 35.175 0 392 113 7 0 0 0 0.0029104 1 17475 98.458 63.353 1 0.63508 0.73276 0 188580000 115880000 72698000 3956 1140 1461 1505 6232 6232 CESAFLSK 8 1 0 Unmodified _CESAFLSK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.2305 2 471.223485 940.432418 86656 0.011292 5.3209E-06 -0.03935 -1.8543E-05 -0.028059 -1.3222E-05 471.223572308511 475.230543916528 39.683 1.8432 39.683 39.097 40.94 0 697 146 10 0 0 0 0.0052486 2 18132 91.064 61.491 1 1.2949 1.118 0 105490000 45718000 59774000 3957 1140 1461 1505 6233;6234 6233 CESAFLSK 8 1 0 Unmodified _CESAFLSK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.2307 2 471.223485 940.432418 86516.07 0.071509 3.3697E-05 -0.037609 -1.7722E-05 0.0339 1.5975E-05 471.2235319031 475.230522898262 39.596 2.633 39.596 38.828 41.461 0 766 212 6 0 0 0 0.0021394 3 17676 102.51 72.941 1 1.3116 1.1187 0 95541000 41130000 54410000 3958 1140 1461 1505 6235;6236;6237 6235 CFIVGADNVGSK 12 1 0 Unmodified _CFIVGADNVGSK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;G3V210;F8VZS0;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8107 2 633.810987 1265.60742 78788.65 0.5004 0.00031716 0.11964 7.5828E-05 0.62004 0.00039299 633.810367611405 637.818370961422 62.941 0.77965 62.941 62.515 63.295 0 257 75 5 0 0 0 0.00018756 2 36174 76.228 69.333 1 1.1204 1.103 0 19747000 11567000 8180100 3959 345 1462 1506 6238;6239 6239 CFIVGADNVGSK 12 1 0 Unmodified _CFIVGADNVGSK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;G3V210;F8VZS0;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.817 2 633.810987 1265.60742 78280.38 0.58403 0.00037016 -0.13669 -8.6637E-05 0.44733 0.00028353 633.810654161191 637.817582072827 61.735 0.8465 61.735 61.304 62.15 0 207 77 5 0 0 0 1.1287E-05 3 36278 107.45 107.45 1 1.1268 1.2063 0 21203000 10002000 11200000 3960 345 1462 1506 6240;6241;6242 6242 CFIVGADNVGSK 12 1 0 Unmodified _CFIVGADNVGSK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;G3V210;F8VZS0;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.8107 2 633.810987 1265.60742 NaN NaN NaN 0.096472 6.1145E-05 NaN NaN NaN NaN 72.75 1.0899 72.75 72.14 73.23 0 0 0 0 0.024708 1 37725 49.5 42.605 1 NaN NaN 0 2517500 2517500 0 3961 345 1462 1506 6243 6243 CGAALAGHQLIR 12 0 1 Unmodified _CGAALAGHQLIR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8411 2 633.840413 1265.66627 NaN NaN NaN -0.76951 -0.00048775 NaN NaN NaN NaN 41.131 0.22449 41.131 40.952 41.177 0 0 0 0 3.7016E-05 1 22086 97.431 80.2 1 NaN NaN 0 6700100 6700100 0 3962 1665 1463 1507 6244 6244 CGAALAGHQLIR 12 0 1 Unmodified _CGAALAGHQLIR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.8415 2 633.840413 1265.66627 77062.05 0.34734 0.00022016 0.34494 0.00021864 0.69228 0.00043879 633.840793731123 638.84474411506 48.846 0.44071 48.846 48.618 49.058 0 82 33 4 0 0 0 0.00021427 1 23824 74.301 66.821 1 0.31244 0.27082 0 2505000 1848600 656430 3963 1665 1463 1507 6245 6245 CGDGGQLVLCDR 12 0 1 Unmodified _CGDGGQLVLCDR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3012 2 675.300461 1348.58637 NaN NaN NaN 0.5965 0.00040282 NaN NaN NaN NaN 49.102 0.46135 49.102 48.857 49.319 0 0 0 0 0.0052988 1 27567 62.408 56.103 1 NaN NaN 0 5238700 5238700 0 3964 1435 1464 1508 6246 6246 CGDGGQLVLCDR 12 0 1 Unmodified _CGDGGQLVLCDR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.3055 2 675.300461 1348.58637 73523.94 0.64984 0.00043884 0.24109 0.0001628 0.89093 0.00060164 675.300779781625 680.305134383649 57.732 0.73502 57.732 57.375 58.11 0 212 53 7 0 0 0 0.026785 1 29384 36.447 33.106 1 1.3902 1.1672 0 4250200 1722500 2527700 3965 1435 1464 1508 6247 6247 CGFCHVGEEENEAR 14 0 1 Unmodified _CGFCHVGEEENEAR_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.3411 2 847.338303 1692.66205 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.522 1 25.522 25.022 26.022 0 0 0 0 0.0012427 1 11141 74.944 68.411 1 3966 528 1465 1509 6248 6248 CGFCHVGEEENEAR 14 0 1 Unmodified _CGFCHVGEEENEAR_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.5637 3 565.227961 1692.66205 79762.35 0.42699 0.00024135 -0.558 -0.0003154 -0.13101 -7.4049E-05 565.227877179309 568.563934495734 29.932 0.43856 29.932 29.743 30.181 0 210 31 10 0 0 0 0.00014234 1 12290 60.657 58.806 1 0.97971 0.83203 0 9187400 4716000 4471400 3967 528 1465 1509 6249 6249 CGFCHVGEEENEAR 14 0 1 Unmodified _CGFCHVGEEENEAR_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.2281 3 565.227961 1692.66205 78700.92 0.16131 9.1177E-05 -0.5163 -0.00029183 -0.35499 -0.00020065 565.227965670069 568.564040803756 30.065 0.46508 30.065 29.868 30.333 0 158 28 10 0 0 0 6.6107E-05 2 11893 67.234 66.727 1 0.9476 0.78492 0 7904300 3785200 4119100 3968 528 1465 1509 6250;6251 6250 CGGSELNFR 9 0 1 Unmodified _CGGSELNFR_ 0 0 0 A8K330;Q8IWA0;F8WE20;F8WC81 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.2349 2 520.234916 1038.45528 85806.29 -0.037077 -1.9289E-05 0.3659 0.00019035 0.32882 0.00017106 520.235000409512 525.239293168938 47.026 0.35947 47.026 46.86 47.219 0 97 27 6 0 0 0 0.034146 2 22228 44.377 40.198 1 1.1274 0.98351 0 3527400 1751100 1776300 3969 716 1466 1510 6252;6253 6253 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK 31 1 0 Unmodified _CGSGPVHISGQHLVAVEEDAESEDEEEEDVK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 847.8773 4 845.873127 3379.4634 65163.46 0.604 0.0005109 -0.50093 -0.00042372 0.10307 8.7185E-05 846.123643800011 848.377933684611 86.222 0.59229 86.222 85.925 86.517 0 215 41 8 0 0 0 0.02816 1 47321 22.008 22.008 1 1.4933 1.1979 0 7576100 2772600 4803500 3970 559;1213;2078 1467 1511 6254 6254 CGSVLVR 7 0 1 Unmodified _CGSVLVR_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;E9PQD7;I3L404;E9PM36 P15880 P15880 RPS2;rps2 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 395.7155 2 395.71563 789.416708 96725.66 -0.021952 -8.6867E-06 -0.023004 -9.1031E-06 -0.044956 -1.779E-05 395.715480320661 400.719663848148 27.521 0.60441 27.521 27.233 27.838 1.9073E-06 125 37 6 0 0 0 0.010047 2 12695 117.7 77.724 1 0.93195 1.0233 0 53867000 28333000 25533000 3971 1485 1468 1512 6255;6256 6255 CGSVLVR 7 0 1 Unmodified _CGSVLVR_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;E9PQD7;I3L404;E9PM36 P15880 P15880 RPS2;rps2 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 395.7158 2 395.71563 789.416708 96242.9 0.25823 0.00010219 -0.014611 -5.7817E-06 0.24362 9.6405E-05 395.715489497303 400.719686449364 27.121 0.37394 27.121 26.926 27.3 1.9073E-06 71 18 6 0 0 0 0.0077251 3 12446 128.75 90.553 1 0.92274 1.0552 0 50602000 26540000 24062000 3972 1485 1468 1512 6257;6258;6259 6259 CGSVLVR 7 0 1 Unmodified _CGSVLVR_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;E9PQD7;I3L404;E9PM36 P15880 P15880 RPS2;rps2 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 395.7152 2 395.71563 789.416708 96609.2 0.043745 1.731E-05 0.19181 7.5903E-05 0.23556 9.3213E-05 395.715544427722 400.719768720609 30.31 0.60715 30.31 30.052 30.659 0 165 39 6 0 0 0 0.033078 1 12475 64.523 45.839 1 0.81024 0.66188 0 14154000 7340200 6813500 3973 1485 1468 1512 6260 6260 CGVCEVCQQPECGK 14 1 0 Unmodified _CGVCEVCQQPECGK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 856.3409 2 855.838767 1709.66298 65721.83 0.59345 0.0005079 -0.84695 -0.00072485 -0.2535 -0.00021695 855.838138934728 859.845491629806 31.921 0.27073 31.921 31.793 32.063 0 71 14 7 0 0 0 0.0043219 2 13120 45.653 45.653 1 0.95752 0.77612 0 2742300 1437500 1304800 3974 222 1469 1513 6261;6262 6262 CGVISPR 7 0 1 Unmodified _CGVISPR_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 394.7076 2 394.707805 787.401058 93459.1 0.070248 2.7728E-05 -1.1563 -0.00045642 -1.0861 -0.00042869 394.707574719074 399.71191161862 24.133 0.4282 24.133 23.936 24.364 0 98 19 8 0 0 0 0.014426 2 9935 100.07 49.947 1 0.70298 0.7788 0 63812000 39098000 24713000 3975 831 1470 1514 6263;6264 6263 CGVISPR 7 0 1 Unmodified _CGVISPR_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 394.7078 2 394.707805 787.401058 94191.34 0.004244 1.6751E-06 -0.051625 -2.0377E-05 -0.047381 -1.8702E-05 394.707768700464 399.711916756014 26.051 0.41048 26.051 25.827 26.238 0 70 16 7 0 0 0 0.02688 2 9734 74.415 35.197 1 1.0897 0.90093 0 11360000 5411600 5948000 3976 831 1470 1514 6265;6266 6266 CGVQSFYTPR 10 0 1 Unmodified _CGVQSFYTPR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.7894 2 607.784773 1213.55499 78445.81 0.41188 0.00025033 0.11465 6.9684E-05 0.52653 0.00032002 607.784770589071 612.78899414147 56.619 0.56004 56.619 56.423 56.983 0 209 50 6 0 0 0 2.7898E-09 2 31905 126.07 122.66 1 1.094 1.1148 0 18623000 7990800 10632000 3977 1882 1471 1515 6267;6268 6268 CGVQSFYTPR 10 0 1 Unmodified _CGVQSFYTPR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.7894 2 607.784773 1213.55499 NaN NaN NaN 0.056714 3.447E-05 NaN NaN NaN NaN 55.671 0.62382 55.671 55.429 56.053 3.8147E-06 0 0 0 0.0056524 1 31870 67.897 63.114 1 NaN NaN 0 9937000 0 9937000 3978 1882 1471 1515 6269 6269 CGVQSFYTPR 10 0 1 Unmodified _CGVQSFYTPR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.7857 2 607.784773 1213.55499 78779.23 0.3692 0.00022439 0.35905 0.00021823 0.72825 0.00044262 607.784986411733 612.789063501624 66.33 0.84016 66.33 65.985 66.825 0 255 58 6 0 0 0 0.0046966 1 33514 61.161 60.002 1 1.8084 1.5241 0 4772700 1633600 3139100 3979 1882 1471 1515 6270 6270 CHTPPLYR 8 0 1 Unmodified _CHTPPLYR_ 0 0 0 M0R117;B4DM74;Q02543;B4DM94;B4DUV3;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2571 2 522.258194 1042.50183 81921.78 0.53737 0.00028065 0.074099 3.8699E-05 0.61147 0.00031934 522.257619624224 527.262278817846 25.084 0.57065 25.084 24.883 25.453 0 137 26 9 0 0 0 0.0042374 2 10682 94.262 79.424 1 0.83745 0.96697 0 157440000 91276000 66166000 3980 1003 1472 1516 6271;6272 6272 CHTPPLYR 8 0 1 Unmodified _CHTPPLYR_ 0 0 0 M0R117;B4DM74;Q02543;B4DM94;B4DUV3;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.2584 2 522.258194 1042.50183 81442.33 0.34352 0.00017941 0.66471 0.00034715 1.0082 0.00052656 522.258634495441 527.262422054156 24.585 0.65385 24.585 24.384 25.038 0 128 30 6 0 0 0 0.0042374 2 10295 94.262 94.262 1 0.83146 0.95117 0 160280000 86574000 73703000 3981 1003 1472 1516 6273;6274 6273 CHTPPLYR 8 0 1 Unmodified _CHTPPLYR_ 0 0 0 M0R117;B4DM74;Q02543;B4DM94;B4DUV3;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 348.5077 3 348.507888 1042.50183 101493.9 0.048313 1.6838E-05 0.31453 0.00010962 0.36285 0.00012645 348.507813758725 351.843842910729 24.597 0.38917 24.597 24.403 24.792 -1.9073E-06 85 19 6 0 0 0 0.0026864 1 10315 66.799 66.799 1 0.71591 0.77447 0 27082000 15120000 11963000 3982 1003 1472 1516 6275 6275 CHTPPLYR 8 0 1 Unmodified _CHTPPLYR_ 0 0 0 M0R117;B4DM74;Q02543;B4DM94;B4DUV3;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.2581 2 522.258194 1042.50183 80205.19 0.27625 0.00014427 0.7221 0.00037712 0.99834 0.00052139 522.25827900838 527.262147951457 27.567 0.70724 27.567 27.309 28.016 0 154 28 9 0 0 0 0.0015837 2 10734 107.66 98.07 1 0.87648 0.74526 0 34533000 18588000 15945000 3983 1003 1472 1516 6276;6277 6277 CHTPPLYR 8 0 1 Unmodified _CHTPPLYR_ 0 0 0 M0R117;B4DM74;Q02543;B4DM94;B4DUV3;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.2579 2 522.258194 1042.50183 82424.8 0.020227 1.0564E-05 0.65713 0.00034319 0.67736 0.00035376 522.258201847941 527.262262714091 27.449 0.74452 27.449 27.168 27.913 0 186 30 9 0 0 0 0.0065286 2 10103 86.866 86.866 1 0.89849 0.78056 0 24311000 12551000 11761000 3984 1003 1472 1516 6278;6279 6279 CHVQTIQLCR 10 0 1 Unmodified _CHVQTIQLCR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;H7BYY8 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.8284 2 657.823906 1313.63326 75382.68 0.57385 0.00037749 -0.47735 -0.00031401 0.096503 6.3482E-05 657.823666882651 662.827500383763 41.965 0.38397 41.965 41.774 42.157 0 104 29 5 0 0 0 0.041207 2 19511 38.293 38.293 1 1.1107 0.98193 0 1364500 545520 818980 3985 886 1473 1517 6280;6281 6280 CIAPETLR 8 0 1 Unmodified _CIAPETLR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.257 2 480.252577 958.490601 88530.03 0.27064 0.00012997 -0.19919 -9.5662E-05 0.071446 3.4312E-05 480.25251511861 485.25647821831 43.636 0.70746 43.636 43.354 44.061 0 199 63 4 0 0 0 0.032325 1 23317 50.703 39.335 1 0.69943 0.71586 0 26256000 14902000 11355000 3986 69 1474 1518 6282 6282 CIAPETLR 8 0 1 Unmodified _CIAPETLR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.2568 2 480.252577 958.490601 NaN NaN NaN -0.29621 -0.00014225 NaN NaN NaN NaN 43.103 0.68855 43.103 42.753 43.442 0 0 0 0 0.0058575 1 23272 86.953 56.235 1 NaN NaN 0 15250000 0 15250000 3987 69 1474 1518 6283 6283 CIAPETLR 8 0 1 Unmodified _CIAPETLR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.2524 2 480.252577 958.490601 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.005 1 43.005 42.505 43.505 0 0 0 0 0.0049299 1 23280 87.323 50.736 1 3988 69 1474 1518 6284 6284 CIIPNHEK 8 1 0 Unmodified _CIIPNHEK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 337.5079 3 337.507777 1009.5015 104796 -0.11743 -3.9632E-05 0.13912 4.6953E-05 0.02169 7.3205E-06 337.507910686521 340.179004016817 22.879 0.31198 22.879 22.718 23.03 0 70 16 7 0 0 0 0.020472 1 8853 37.727 25.139 1 1.4765 1.5356 0 16904000 6587900 10316000 3989 81;1544 1475 1519 6285 6285 CIIPNHEK 8 1 0 Unmodified _CIIPNHEK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.764 2 505.758027 1009.5015 NaN NaN NaN -0.3378 -0.00017084 NaN NaN NaN NaN 22.878 0.23133 22.878 22.748 22.979 0 0 0 0 0.0076936 1 8850 81.89 35.869 1 NaN NaN 0 11936000 0 11936000 3990 81;1544 1475 1519 6286 6286 CIIPNHEK 8 1 0 Unmodified _CIIPNHEK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 337.5078 3 337.507777 1009.5015 105744.4 0.5 0.00016875 -0.60879 -0.00020547 -0.10879 -3.6717E-05 337.50759393097 340.178786925293 22.413 0.27848 22.413 22.285 22.563 0 52 11 6 0 0 0 0.026572 1 8402 34.253 15.85 1 1.4809 1.5177 0 17612000 7887300 9724900 3991 81;1544 1475 1519 6287 6287 CITDPQTGLCLLPLK 15 1 0 Unmodified _CITDPQTGLCLLPLK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.4634 2 864.954783 1727.89501 NaN NaN NaN 0.37629 0.00032548 NaN NaN NaN NaN 129.17 0.36951 129.17 128.97 129.34 0 0 0 0 0.016147 1 78069 45.661 30.689 1 NaN NaN 0 1678600 0 1678600 3992 1754 1476 1520 6288 6288 CIVQTTSWSQCSK 13 1 0 Unmodified _CIVQTTSWSQCSK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.867 2 792.860883 1583.70721 NaN NaN NaN 0.2847 0.00022573 NaN NaN NaN NaN 55.398 0.27991 55.398 55.285 55.565 0 0 0 0 1.5942E-06 1 31131 104.52 87.087 1 NaN NaN 0 3765100 0 3765100 3993 979 1477 1521 6289 6289 CIVQTTSWSQCSK 13 1 0 Unmodified _CIVQTTSWSQCSK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.8614 2 792.860883 1583.70721 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.422 1 55.422 54.922 55.922 0 0 0 0 0.01454 1 31154 62.303 43.032 1 3994 979 1477 1521 6290 6290 CIVQTTSWSQCSK 13 1 0 Unmodified _CIVQTTSWSQCSK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.8617 2 792.860883 1583.70721 NaN NaN NaN 0.12663 0.0001004 NaN NaN NaN NaN 54.481 0.18711 54.481 54.36 54.547 0 0 0 0 0.0037232 1 31163 79.659 60.388 1 NaN NaN 0 3731500 3731500 0 3995 979 1477 1521 6291 6291 CIVQTTSWSQCSK 13 1 0 Unmodified _CIVQTTSWSQCSK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 796.8679 2 792.860883 1583.70721 67854.72 0.56061 0.00044449 0.73907 0.00058598 1.2997 0.0010305 792.862156647904 796.868204616786 64.62 0.58375 64.62 64.28 64.864 0 155 39 6 0 0 0 5.7465E-05 1 33341 96.113 92.891 1 1.3888 1.1006 0 6356200 2839700 3516500 3996 979 1477 1521 6292 6292 CIVQTTSWSQCSK 13 1 0 Unmodified _CIVQTTSWSQCSK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 797.3702 2 792.860883 1583.70721 68216.09 0.47308 0.00037509 0.10232 8.1127E-05 0.5754 0.00045622 792.861536036707 796.868002030087 65.214 0.58334 65.214 64.952 65.535 0 164 42 8 0 0 0 0.00013647 2 32849 89.548 89.548 1 1.3062 1.0695 0 4910900 2183500 2727400 3997 979 1477 1521 6293;6294 6293 CIYFEAK 7 1 0 Unmodified _CIYFEAK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.7306 2 465.723121 929.431689 91337.09 0.23067 0.00010743 -0.4245 -0.0001977 -0.19383 -9.0271E-05 465.722693115889 469.73007956864 50.604 0.47824 50.604 50.353 50.831 0 147 45 4 0 0 0 0.028572 1 27935 71.715 59.331 1 0.83317 0.89733 0 40877000 21294000 19584000 3998 1934 1478 1522 6295 6295 CIYFEAK 7 1 0 Unmodified _CIYFEAK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 465.7233 2 465.723121 929.431689 87547.28 0.33743 0.00015715 0.31095 0.00014482 0.64838 0.00030197 465.723068433856 469.730291897631 57.834 0.81923 57.834 57.506 58.325 0 263 61 6 0 0 0 0.056643 1 29288 52.018 38.68 1 1.3425 1.0767 0 8228000 3544900 4683100 3999 1934 1478 1522 6296 6296 CIYFEAK 7 1 0 Unmodified _CIYFEAK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 465.723 2 465.723121 929.431689 89117.03 0.23269 0.00010837 0.23263 0.00010834 0.46532 0.00021671 465.723038887087 469.730247595394 58.077 0.86531 58.077 57.791 58.656 -3.8147E-06 275 64 6 0 0 0 0.05908 1 28853 50.898 41.148 1 1.3443 1.0962 0 6509900 2913900 3596000 4000 1934 1478 1522 6297 6297 CLLAASPENEAGGLK 15 1 0 Unmodified _CLLAASPENEAGGLK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.3868 2 765.385048 1528.75554 NaN NaN NaN -0.07822 -5.9868E-05 NaN NaN NaN NaN 72.151 0.41587 72.151 71.903 72.319 0 0 0 0 0.00042572 1 42190 73.067 56.435 1 NaN NaN 0 4724100 4724100 0 4001 214 1479 1523 6298 6298 CLLAASPENEAGGLK 15 1 0 Unmodified _CLLAASPENEAGGLK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.8948 2 765.385048 1528.75554 73534.32 0.64189 0.00049129 -0.10004 -7.6566E-05 0.54185 0.00041472 765.886354750247 769.391544577329 70.899 0.47844 70.899 70.705 71.183 0 86 35 4 0 0 0 0.0003003 1 42338 60.434 46.276 1 0.77791 0.81229 0 10102000 3338000 6763900 4002 214 1479 1523 6299 6299 CLLAASPENEAGGLK 15 1 0 Unmodified _CLLAASPENEAGGLK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.3852 2 765.385048 1528.75554 70220.09 0.5439 0.00041629 0.10463 8.0079E-05 0.64852 0.00049637 765.384822353814 769.392309324324 82.567 0.58042 82.567 82.281 82.861 0 181 36 7 0 0 0 0.00020485 2 44954 76.143 69.702 1 1.1305 0.88807 0 3956200 1693700 2262500 4003 214 1479 1523 6300;6301 6301 CLLAASPENEAGGLK 15 1 0 Unmodified _CLLAASPENEAGGLK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 769.3926 2 765.385048 1528.75554 70892.09 0.64181 0.00049123 -0.033305 -2.5491E-05 0.6085 0.00046574 765.384871299953 769.391952118552 82.713 0.61389 82.713 82.439 83.053 -7.6294E-06 181 35 8 0 0 0 0.00022114 3 44259 65.5 59.397 1 1.2167 0.98381 0 4345300 1795900 2549400 4004 214 1479 1523 6302;6303;6304 6304 CLLIDYNPDSQELDFR 16 0 1 Unmodified _CLLIDYNPDSQELDFR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1004.4745 2 999.467297 1996.92004 61452.9 0.42816 0.00042793 -0.15513 -0.00015505 0.27303 0.00027288 999.466513062894 1004.47217300906 125.28 0.35837 125.28 125.11 125.46 0 51 12 6 0 0 0 0.060019 1 75151 22.232 17.248 1 1.1499 0.99559 0 2583700 1259900 1323800 4005 493 1480 1524 6305 6305 CLLIDYNPDSQELDFR 16 0 1 Unmodified _CLLIDYNPDSQELDFR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1004.9722 2 999.467297 1996.92004 61511.28 0.40688 0.00040667 -0.27572 -0.00027557 0.13117 0.0001311 999.466963345729 1004.47128397437 125.22 0.45769 125.22 125.01 125.47 0 47 18 4 0 0 0 0.019813 1 74166 28.806 23.822 1 1.1788 1.0346 0 2514300 1300700 1213700 4006 493 1480 1524 6306 6306 CLSVSPGGQWLVSGSDDGSLR 21 0 1 Unmodified _CLSVSPGGQWLVSGSDDGSLR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1089.0184 2 1089.01822 2176.02188 NaN NaN NaN -0.2683 -0.00029218 NaN NaN NaN NaN 105.19 0.20276 105.19 105.05 105.26 0 0 0 0 4.4224E-06 1 66698 61.409 54.279 1 NaN NaN 0 2676500 2676500 0 4007 1726 1481 1525 6307 6307 CLSVSPGGQWLVSGSDDGSLR 21 0 1 Unmodified _CLSVSPGGQWLVSGSDDGSLR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1089.5148 2 1089.01822 2176.02188 60120.61 0.18852 0.0002053 -0.21636 -0.00023562 -0.027842 -3.032E-05 1089.01825752892 1094.02411817449 116.81 0.33229 116.81 116.66 116.99 0 56 14 6 0 0 0 0.0099198 1 67747 23.956 23.956 1 0.79133 0.6871 0 3474800 2077900 1396900 4008 1726 1481 1525 6308 6308 CMPAPEEIVEELPASK 16 1 0 Oxidation (M) _CM(ox)PAPEEIVEELPASK_ CM(1)PAPEEIVEELPASK CM(43.63)PAPEEIVEELPASK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.9378 2 908.428795 1814.84304 64885.15 0.82552 0.00074993 -0.20998 -0.00019075 0.61554 0.00055918 908.928431307145 912.937553295339 95.886 0.51196 95.886 95.629 96.141 0 155 45 5 0 0 0 0.0008729 1 58310 43.628 41.489 1 1.4394 1.5147 0 15383000 7451300 7931900 4009 1569 1482 1526 6309 6309 1329 CMPAPEEIVEELPASK 16 1 0 Oxidation (M) _CM(ox)PAPEEIVEELPASK_ CM(1)PAPEEIVEELPASK CM(45.36)PAPEEIVEELPASK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 912.4371 2 908.428795 1814.84304 65175.13 0.82 0.00074491 0.1137 0.00010329 0.9337 0.0008482 908.930344502208 912.436353145406 95.171 0.5751 95.171 94.931 95.506 0 171 49 6 0 0 0 0.00067733 1 59129 45.359 42.136 1 1.9016 2.007 0 20001000 6107500 13894000 4010 1569 1482 1526 6310 6310 1329 CMQLTDFILK 10 1 0 Oxidation (M) _CM(ox)QLTDFILK_ CM(1)QLTDFILK CM(119.75)QLTDFILK 0 1 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8198 2 642.819966 1283.62538 75298.76 0.6712 0.00043146 0.1123 7.2187E-05 0.7835 0.00050365 642.820087190499 646.827394932314 101.14 1.1159 101.14 100.35 101.47 0 315 89 6 0 0 0 1.482E-08 1 63321 119.75 108.26 1 1.1714 1.2293 0 24031000 10866000 13165000 4011 645;725 1483 1527 6311 6311 502 CNCKPTDENPCGFDSECLNR 20 1 1 Unmodified _CNCKPTDENPCGFDSECLNR_ 0 0 1 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.0007 3 824.992697 2471.95626 66641.6 0.76534 0.0006314 -0.6309 -0.00052049 0.13444 0.00011091 825.326846692835 831.334329923122 54.612 0.4526 54.612 54.385 54.838 -3.8147E-06 201 30 9 0 0 0 0.014396 1 27187 22.24 22.24 1 1.7331 1.433 0 4011000 1633800 2377200 4012 1435 1484 1528 6312 6312 CNCKPTDENPCGFDSECLNR 20 1 1 Unmodified _CNCKPTDENPCGFDSECLNR_ 0 0 1 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 824.9936 3 824.992697 2471.95626 68095.55 0.60764 0.0005013 -0.81601 -0.0006732 -0.20837 -0.0001719 825.326641977823 830.999878658825 55.282 0.47316 55.282 55.025 55.498 0 161 28 9 0 0 0 0.051483 1 27038 15.241 15.241 1 1.7105 1.4636 0 2763000 969410 1793600 4013 1435 1484 1528 6313 6313 CNELQDIEK 9 1 0 Unmodified _CNELQDIEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.7734 2 574.766245 1147.51794 80547.38 0.62777 0.00036082 -0.10662 -6.128E-05 0.52116 0.00029954 574.766267253356 578.773247500998 42.031 0.49326 42.031 41.774 42.267 0 111 35 5 0 0 0 2.5262E-05 1 22198 113.71 100.67 1 1.9753 1.9358 0 21162000 7537700 13624000 4014 1391 1485 1529 6314 6314 CNELQDIEK 9 1 0 Unmodified _CNELQDIEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.7738 2 574.766245 1147.51794 82176.8 0.71012 0.00040815 -0.34954 -0.0002009 0.36059 0.00020725 574.765810805917 578.77306162899 40.664 0.59157 40.664 40.494 41.086 0 101 43 4 0 0 0 0.012358 1 22035 57.55 51.808 1 1.855 1.9004 0 9407700 3709700 5698000 4015 1391 1485 1529 6315 6315 CNELQDIEK 9 1 0 Unmodified _CNELQDIEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 578.7739 2 574.766245 1147.51794 81551.15 0.28125 0.00016165 0.087705 5.041E-05 0.36895 0.00021206 575.26752497838 578.77342090788 48.54 1.0831 48.54 47.963 49.046 3.8147E-06 192 82 4 0 0 0 0.051106 1 23486 37.591 37.591 1 6.2355 4.9302 0 4144500 680940 3463600 4016 1391 1485 1529 6316 6316 CNTLITLIER 10 0 1 Unmodified _CNTLITLIER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.3432 2 616.837005 1231.65946 NaN NaN NaN -0.10015 -6.1774E-05 NaN NaN NaN NaN 104.33 0.58501 104.33 104.1 104.69 0 0 0 0 0.0047705 1 64376 71.349 51.02 1 NaN NaN 0 6314700 0 6314700 4017 1391 1486 1530 6317 6317 CNTLITLIER 10 0 1 Unmodified _CNTLITLIER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8381 2 616.837005 1231.65946 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.27 1 104.27 103.77 104.77 -7.6294E-06 0 0 0 6.4771E-05 1 64414 83.883 63.363 1 4018 1391 1486 1530 6318 6318 CNTLITLIER 10 0 1 Unmodified _CNTLITLIER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.8418 2 616.837005 1231.65946 77306.52 0.047082 2.9042E-05 0.041918 2.5856E-05 0.089 5.4898E-05 616.83743309225 621.84118909444 103.41 0.63761 103.41 103.2 103.84 0 132 53 6 0 0 0 1.1573E-05 2 65397 104.05 91.258 1 1.8898 1.8628 0 13052000 3362900 9688700 4019 1391 1486 1530 6319;6320 6319 CNTLITLIER 10 0 1 Unmodified _CNTLITLIER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.8406 2 616.837005 1231.65946 NaN NaN NaN 0.030398 1.8751E-05 NaN NaN NaN NaN 116.54 0.56885 116.54 116.27 116.84 -7.6294E-06 0 0 0 0.014487 1 68407 58.699 46.652 1 NaN NaN 0 3837300 0 3837300 4020 1391 1486 1530 6321 6321 CNTLITLIER 10 0 1 Unmodified _CNTLITLIER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.8416 2 616.837005 1231.65946 NaN NaN NaN -0.016372 -1.0099E-05 NaN NaN NaN NaN 116.28 0.52608 116.28 116.04 116.57 -7.6294E-06 0 0 0 0.0036711 1 67336 75.652 62.633 1 NaN NaN 0 4564200 0 4564200 4021 1391 1486 1530 6322 6322 CNVQFNLLDPLK 12 1 0 Unmodified _CNVQFNLLDPLK_ 0 0 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.8894 2 730.881944 1459.74933 71262.27 0.83756 0.00061216 0.8661 0.00063301 1.7037 0.0012452 731.384805710783 734.889368946008 127.96 0.55939 127.96 127.76 128.32 -7.6294E-06 68 23 5 0 0 0 0.0077781 1 76401 48.284 48.284 1 0.5375 0.43563 0 2688100 1739200 948900 4022 1924 1487 1531 6323 6323 CNYNCPHANEAAFPFYR 17 0 1 Unmodified _CNYNCPHANEAAFPFYR_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.6382 3 710.968481 2129.88361 73141 0.60533 0.00043037 -0.57091 -0.0004059 0.034417 2.447E-05 711.302568892858 714.638482123022 87.593 0.49081 87.593 87.379 87.87 0 176 30 9 0 0 0 0.00020616 2 48242 46.249 46.249 1 1.2122 1.0159 0 4057800 1657700 2400100 4023 979 1488 1532 6324;6325 6325 CNYNCPHANEAAFPFYR 17 0 1 Unmodified _CNYNCPHANEAAFPFYR_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.9692 3 710.968481 2129.88361 71852.53 0.57164 0.00040642 -0.26909 -0.00019132 0.30255 0.0002151 711.302712940549 714.304211549136 87.574 0.49451 87.574 87.359 87.854 0 169 28 9 0 0 0 3.169E-05 1 47336 59.728 59.723 1 1.1558 1.0194 0 4105000 1923200 2181700 4024 979 1488 1532 6326 6326 CPEALFQPSFLGMESCGIHETTFNSIMK 28 1 0 2 Oxidation (M) _CPEALFQPSFLGM(ox)ESCGIHETTFNSIM(ox)K_ CPEALFQPSFLGM(1)ESCGIHETTFNSIM(1)K CPEALFQPSFLGM(42.32)ESCGIHETTFNSIM(42.32)K 0 2 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1091.4943 3 1088.48872 3262.44433 57967.56 0.52005 0.00056607 -0.87879 -0.00095655 -0.35874 -0.00039048 1088.82207477686 1091.49404408611 111.95 0.52889 111.95 111.72 112.25 0 345 39 13 0 0 0 1.109E-06 1 72337 42.321 42.321 1 3.6824 4.1356 0 116710000 24810000 91898000 4025 1624;1656;2186 1489 1533 6327 6327 1407;1408 CPEALFQPSFLGMESCGIHETTFNSIMK 28 1 0 2 Oxidation (M) _CPEALFQPSFLGM(ox)ESCGIHETTFNSIM(ox)K_ CPEALFQPSFLGM(1)ESCGIHETTFNSIM(1)K CPEALFQPSFLGM(50.86)ESCGIHETTFNSIM(50.86)K 0 2 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1088.8231 3 1088.48872 3262.44433 57803.27 0.3295 0.00035865 -0.85335 -0.00092886 -0.52385 -0.0005702 1088.82273158392 1091.82797460317 123.26 0.41218 123.26 123.05 123.46 0 175 18 13 0 0 0 2.6295E-10 1 72697 50.857 50.857 1 0.99388 0.81833 0 28719000 14376000 14343000 4026 1624;1656;2186 1489 1533 6328 6328 1407;1408 CPNLTYLNLSGNK 13 1 0 Unmodified _CPNLTYLNLSGNK_ 0 0 0 Q53F20;Q9BTT0;E9PPH5;Q5TB19;B4E0D5;E9PLC4 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.3752 2 747.374483 1492.73441 71562.49 0.91738 0.00068563 -0.95585 -0.00071438 -0.038466 -2.8748E-05 747.374485753178 751.380637870449 97.373 0.45529 97.373 97.159 97.614 7.6294E-06 77 22 5 0 0 0 0.032676 2 54792 45.661 41.898 1 1.2759 1.0373 0 2693700 1012800 1680900 4027 1784 1490 1534 6329;6330 6330 CPQIVIAFYEER 12 0 1 Unmodified _CPQIVIAFYEER_ 0 0 0 V9HWG0;P45973;Q6I9T7;A4D177;Q13185 V9HWG0;A4D177 V9HWG0 HEL25;CBX5;CBX3 Chromobox protein homolog 5;Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.8804 2 762.879401 1523.74425 72459.8 0.71819 0.00054789 -0.32208 -0.00024571 0.39611 0.00030218 762.878927655683 767.882871278556 105.99 0.59178 105.99 105.73 106.32 0 138 42 6 0 0 0 4.0604E-08 1 65771 137.98 137.98 1 0.59942 0.62074 0 13769000 7751700 6017200 4028 1568;662 1491 1535 6331 6331 CPQIVIAFYEER 12 0 1 Unmodified _CPQIVIAFYEER_ 0 0 0 V9HWG0;P45973;Q6I9T7;A4D177;Q13185 V9HWG0;A4D177 V9HWG0 HEL25;CBX5;CBX3 Chromobox protein homolog 5;Chromobox protein homolog 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.3819 2 762.879401 1523.74425 NaN NaN NaN -0.1849 -0.00014105 NaN NaN NaN NaN 105.31 0.56792 105.31 105.01 105.58 0 0 0 0 2.763E-08 1 66750 110.39 95.415 1 NaN NaN 0 18368000 18368000 0 4029 1568;662 1491 1535 6332 6332 CPQIVIAFYEER 12 0 1 Unmodified _CPQIVIAFYEER_ 0 0 0 V9HWG0;P45973;Q6I9T7;A4D177;Q13185 V9HWG0;A4D177 V9HWG0 HEL25;CBX5;CBX3 Chromobox protein homolog 5;Chromobox protein homolog 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.382 2 762.879401 1523.74425 NaN NaN NaN 0.37868 0.00028889 NaN NaN NaN NaN 117.38 0.74856 117.38 117.07 117.82 7.6294E-06 0 0 0 0.0017111 1 69029 74.944 65.257 1 NaN NaN 0 8306600 8306600 0 4030 1568;662 1491 1535 6333 6333 CPQVEEAIVQSGQK 14 1 0 Unmodified _CPQVEEAIVQSGQK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.8887 2 786.887955 1571.76136 69588.55 0.66618 0.00052421 -0.36508 -0.00028728 0.3011 0.00023693 786.887851561229 791.396543208536 53.583 0.40752 53.583 53.37 53.778 0 126 30 6 0 0 0 1.8954E-29 3 29930 168.02 168.02 1 0.69433 0.70451 0 18153000 11142000 7010200 4031 125 1492 1536 6334;6335;6336 6335 CPQVEEAIVQSGQK 14 1 0 Unmodified _CPQVEEAIVQSGQK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.8959 2 786.887955 1571.76136 69768.38 0.88253 0.00069446 -0.38263 -0.00030108 0.49991 0.00039337 787.389193000368 790.895011115489 52.447 0.55424 52.447 52.189 52.744 -3.8147E-06 199 41 6 0 0 0 1.3747E-21 2 29917 148.18 141.89 1 0.72503 0.77058 0 23353000 14564000 8788600 4032 125 1492 1536 6337;6338 6338 CPQVEEAIVQSGQK 14 1 0 Unmodified _CPQVEEAIVQSGQK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.8956 2 786.887955 1571.76136 67454.83 0.42915 0.0003377 -0.24223 -0.00019061 0.18692 0.00014709 786.888067405669 790.895263370084 62.503 0.61869 62.503 62.205 62.823 0 228 49 7 0 0 0 1.5099E-05 1 32058 98.407 98.407 1 1.1053 0.8742 0 10524000 4657800 5866100 4033 125 1492 1536 6339 6339 CPQVEEAIVQSGQK 14 1 0 Unmodified _CPQVEEAIVQSGQK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.3889 2 786.887955 1571.76136 69375.54 0.43308 0.00034078 -0.42301 -0.00033286 0.010072 7.9257E-06 786.887938247314 790.895095898824 63.118 0.68362 63.118 62.84 63.524 0 252 60 6 0 0 0 0.0011621 3 31748 72.34 72.34 1 1.1301 0.92103 0 7595000 3137100 4457900 4034 125 1492 1536 6340;6341;6342 6341 CPVICMVEVR 10 0 1 Oxidation (M) _CPVICM(ox)VEVR_ CPVICM(1)VEVR CPVICM(41.98)VEVR 0 1 0 REV__Q7Z2K2 REV__Q7Z2K2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.8081 2 639.803793 1277.59303 NaN NaN NaN 1.4092 0.00090164 NaN NaN NaN NaN 34.871 0.352 34.871 34.657 35.009 0 0 0 0 0.022158 1 17679 41.979 13.467 1 NaN NaN 0 6859100 0 6859100 + 4035 2164 1493 1537 6343 6343 2009 CQNILQGNFKPDFYLK 16 2 0 Unmodified _CQNILQGNFKPDFYLK_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.6803 3 662.336499 1983.98767 73185.43 0.87294 0.00057818 0.10618 7.0328E-05 0.97912 0.00064851 662.670716800718 667.679365881891 114.62 0.41167 114.62 114.45 114.86 0 92 18 7 0 0 0 0.00014834 1 67022 54.237 54.237 1 1.5796 1.3536 0 8530900 3008400 5522500 4036 1194;1193 1494 1538 6344 6344 CSEGSFLLTTFPR 13 0 1 Unmodified _CSEGSFLLTTFPR_ 0 0 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.8741 2 757.869034 1513.72351 73725.94 0.4442 0.00033664 0.10724 8.1273E-05 0.55144 0.00041792 757.868975033791 762.87331012635 109.59 0.32974 109.59 109.46 109.79 7.6294E-06 80 26 4 0 0 0 0.0001555 3 68645 85.813 81.514 1 1.3197 1.3257 0 7882700 3766600 4116100 4037 573 1495 1539 6345;6346;6347 6346 CSEGSFLLTTFPR 13 0 1 Unmodified _CSEGSFLLTTFPR_ 0 0 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.8719 2 757.869034 1513.72351 NaN NaN NaN -0.65034 -0.00049287 NaN NaN NaN NaN 109.01 0.26319 109.01 108.9 109.16 0 0 0 0 0.021876 1 69894 56.225 42.018 1 NaN NaN 0 4380200 4380200 0 4038 573 1495 1539 6348 6348 CSNPLDTSVK 10 1 0 Unmodified _CSNPLDTSVK_ 0 0 0 P17812;B4E1E0;B4DMB5;B7Z9C4 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.7761 2 560.768788 1119.52302 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.813 1 38.813 38.313 39.313 0 0 0 0 0.0041025 1 20447 65.305 41.333 1 4039 1494 1496 1540 6349 6349 CSQDQGVLASELAQNK 16 1 0 Unmodified _CSQDQGVLASELAQNK_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.4173 2 874.417607 1746.82066 66364.35 0.31957 0.00027944 0.3834 0.00033525 0.70296 0.00061468 874.417480584407 878.426134014555 64.785 0.62512 64.785 64.513 65.138 0 151 56 4 0 0 0 1.6066E-24 4 37286 139.48 139.48 1 0.68905 0.71581 0 11427000 6508500 4918200 4040 2037 1497 1541 6350;6351;6352;6353 6352 CSQDQGVLASELAQNK 16 1 0 Unmodified _CSQDQGVLASELAQNK_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.9194 2 874.417607 1746.82066 66396.45 0.45633 0.00039902 0.35426 0.00030977 0.8106 0.0007088 874.919142607423 878.42576153572 63.686 0.56677 63.686 63.485 64.052 0 153 51 4 0 0 0 3.8065E-06 3 37448 106.32 106.32 1 0.62638 0.64101 0 11890000 6385700 5503800 4041 2037 1497 1541 6354;6355;6356 6356 CSQDQGVLASELAQNK 16 1 0 Unmodified _CSQDQGVLASELAQNK_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 874.9199 2 874.417607 1746.82066 64383.48 0.57352 0.0005015 0.028178 2.4639E-05 0.6017 0.00052614 874.417787530059 878.424828347347 74.847 0.6013 74.847 74.522 75.123 0 267 43 9 0 0 0 1.3323E-24 2 39695 141.37 141.37 1 0.51124 0.40201 0 17253000 11177000 6076400 4042 2037 1497 1541 6357;6358 6358 CSQDQGVLASELAQNK 16 1 0 Unmodified _CSQDQGVLASELAQNK_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 874.4178 2 874.417607 1746.82066 64638.52 0.15667 0.000137 0.34654 0.00030302 0.50321 0.00044002 874.4179909291 878.425237058951 75.253 0.68023 75.253 74.965 75.645 0 286 50 10 0 0 0 1.454E-24 1 39131 140.53 140.53 1 0.51804 0.41572 0 18361000 12712000 5648900 4043 2037 1497 1541 6359 6359 CTGGEVGATSALAPK 15 1 0 Unmodified _CTGGEVGATSALAPK_ 0 0 0 P30050;Q59FI9;D3DS95 P30050 P30050 RPL12;hCG_21173 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.8583 2 709.850841 1417.68713 70601.01 0.87776 0.00062308 -0.2189 -0.00015538 0.65887 0.0004677 709.850656142124 713.857877744042 46.251 0.65293 46.251 45.98 46.633 0 289 56 7 0 0 0 6.0219E-07 2 24922 104.59 100.44 1 0.86389 0.9721 0 72354000 33230000 39124000 4044 1532 1498 1542 6360;6361 6361 CTGGEVGATSALAPK 15 1 0 Unmodified _CTGGEVGATSALAPK_ 0 0 0 P30050;Q59FI9;D3DS95 P30050 P30050 RPL12;hCG_21173 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.8583 2 709.850841 1417.68713 69760.74 0.60045 0.00042623 0.28997 0.00020584 0.89043 0.00063207 709.850804135385 713.858539189555 45.259 0.53843 45.259 44.996 45.534 0 272 46 8 0 0 0 7.2116E-06 3 24772 95.094 88.482 1 0.95392 1.0692 0 112580000 56670000 55910000 4045 1532 1498 1542 6362;6363;6364 6364 CTGGEVGATSALAPK 15 1 0 Unmodified _CTGGEVGATSALAPK_ 0 0 0 P30050;Q59FI9;D3DS95 P30050 P30050 RPL12;hCG_21173 60S ribosomal protein L12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.8514 2 709.850841 1417.68713 70750.7 0.67189 0.00047694 -0.08093 -5.7448E-05 0.59096 0.00041949 709.850797334528 713.858052126759 53.492 0.69109 53.492 53.187 53.878 0 345 49 12 0 0 0 1.0816E-05 2 26533 114.72 110.42 1 1.1305 0.91524 0 23557000 10822000 12734000 4046 1532 1498 1542 6365;6366 6366 CTLCSQPGATIGCEIK 16 1 0 Unmodified _CTLCSQPGATIGCEIK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6;B4E138 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.9242 2 897.912789 1793.81103 NaN NaN NaN 3.6861 0.0033098 NaN NaN NaN NaN 68.361 0.33801 68.361 68.188 68.526 7.6294E-06 0 0 0 0.01474 1 40561 42.809 36.368 1 NaN NaN 0 5164900 0 5164900 4047 528 1499 1543 6367 6367 CTLCSQPGATIGCEIK 16 1 0 Unmodified _CTLCSQPGATIGCEIK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6;B4E138 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.9211 2 897.912789 1793.81103 62083.25 0.2882 0.00025878 -1.0124 -0.00090907 -0.72422 -0.00065029 897.912540789565 902.421896243566 79.855 0.75851 79.855 79.389 80.148 0 219 46 9 0 0 0 0.0001139 3 43036 78.324 75.286 1 1.0349 0.83116 0 7771800 3543000 4228900 4048 528 1499 1543 6368;6369;6370 6370 CTLCSQPGATIGCEIK 16 1 0 Unmodified _CTLCSQPGATIGCEIK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6;B4E138 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 902.4208 2 897.912789 1793.81103 62044.25 0.12019 0.00010792 -0.54285 -0.00048743 -0.42266 -0.00037951 897.912763997221 901.91946814369 80.105 0.77323 80.105 79.849 80.622 -7.6294E-06 200 46 8 0 0 0 0.00013802 3 42370 76.326 72.901 1 1.1305 0.9224 0 6174100 3000400 3173700 4049 528 1499 1543 6371;6372;6373 6373 CVEVETDVVSNTSGSAR 17 0 1 Unmodified _CVEVETDVVSNTSGSAR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 910.9237 2 905.417804 1808.82106 64024.21 0.37206 0.00033687 -0.1363 -0.0001234 0.23576 0.00021346 905.919397171562 910.422284980602 64.651 0.44348 64.651 64.392 64.835 0 111 29 6 0 0 0 8.8619E-05 2 33329 61.212 57.989 1 1.2421 1.0595 0 2796900 1307600 1489300 4050 120 1500 1544 6374;6375 6375 CVEVETDVVSNTSGSAR 17 0 1 Unmodified _CVEVETDVVSNTSGSAR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 905.9194 2 905.417804 1808.82106 65930.25 0.14314 0.0001296 0.39811 0.00036045 0.54124 0.00049005 905.418310540393 910.923636555745 65.295 0.46297 65.295 65.004 65.467 0 120 31 6 0 0 0 0.0062518 1 32882 34.179 34.179 1 1.0133 0.91445 0 2220700 1262200 958460 4051 120 1500 1544 6376 6376 CVGLSPDGR 9 0 1 Unmodified _CVGLSPDGR_ 0 0 0 Q15269;A0A0B4J2E5;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.7368 2 480.732009 959.449465 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.615 1 29.615 29.115 30.115 0 0 0 0 0.0083617 1 14321 65.246 24.978 1 4052 1756 1501 1545 6377 6377 CVLPEEDSGELAK 13 1 0 Unmodified _CVLPEEDSGELAK_ 0 0 0 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.8495 2 723.842681 1445.67081 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.354 1 62.354 61.854 62.854 -3.8147E-06 0 0 0 0.040086 1 35791 42.718 30.658 1 4053 2136 1502 1546 6378 6378 CYIVATVDR 9 0 1 Unmodified _CYIVATVDR_ 0 0 0 G3V5S9;G3V1S4;Q4FZ45;Q9Y324;Q66K47 G3V5S9 G3V5S9 FCF1;DKFZp686O2396 rRNA-processing protein FCF1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.7814 2 548.776416 1095.53828 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.778 1 55.778 55.278 56.278 0 0 0 0 0.0031099 1 31383 75.854 60.192 1 4054 1272 1503 1547 6379 6379 CYIVATVDR 9 0 1 Unmodified _CYIVATVDR_ 0 0 0 G3V5S9;G3V1S4;Q4FZ45;Q9Y324;Q66K47 G3V5S9 G3V5S9 FCF1;DKFZp686O2396 rRNA-processing protein FCF1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.7802 2 548.776416 1095.53828 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.78 1 54.78 54.28 55.28 0 0 0 0 0.0033111 1 31342 72.485 56.152 1 4055 1272 1503 1547 6380 6380 CYIVATVDR 9 0 1 Unmodified _CYIVATVDR_ 0 0 0 G3V5S9;G3V1S4;Q4FZ45;Q9Y324;Q66K47 G3V5S9 G3V5S9 FCF1;DKFZp686O2396 rRNA-processing protein FCF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.7806 2 548.776416 1095.53828 82634.01 0.39901 0.00021897 -0.44571 -0.0002446 -0.046702 -2.5629E-05 548.776546987179 553.780370383892 64.716 0.52566 64.716 64.392 64.917 0 111 35 5 0 0 0 0.016119 3 33256 54.157 46.217 1 0.95849 0.83439 0 1904500 1054000 850510 4056 1272 1503 1547 6381;6382;6383 6381 CYIVATVDR 9 0 1 Unmodified _CYIVATVDR_ 0 0 0 G3V5S9;G3V1S4;Q4FZ45;Q9Y324;Q66K47 G3V5S9 G3V5S9 FCF1;DKFZp686O2396 rRNA-processing protein FCF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.7808 2 548.776416 1095.53828 82514.37 0.32669 0.00017928 0.20336 0.0001116 0.53005 0.00029088 548.776674023394 553.78048406431 65.127 0.47356 65.127 64.907 65.381 0 110 34 4 0 0 0 0.042514 2 32932 41.029 31.042 1 1.0674 0.95244 0 1960500 1007900 952590 4057 1272 1503 1547 6384;6385 6385 CYVQPQWVFDSVNAR 15 0 1 Unmodified _CYVQPQWVFDSVNAR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;Q6ZUE0 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 934.942 2 934.941053 1867.86755 62687.03 0.83613 0.00078174 0.49014 0.00045825 1.3263 0.00124 935.443301535989 939.944857091457 118.99 0.38122 118.99 118.78 119.16 7.6294E-06 85 17 7 0 0 0 0.0018483 1 70347 46.592 46.592 1 1.0543 0.8863 0 3097400 1487600 1609900 4058 886 1504 1548 6386 6386 CYVQPQWVFDSVNAR 15 0 1 Unmodified _CYVQPQWVFDSVNAR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;Q6ZUE0 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 935.441 2 934.941053 1867.86755 61668.41 0.83804 0.00078351 -0.015047 -1.4068E-05 0.82299 0.00076945 935.442497010999 939.945587270761 118.79 0.44644 118.79 118.56 119.01 0 78 21 7 0 0 0 0.0042437 1 69311 39.785 39.785 1 1.0025 0.85938 0 2834700 1512200 1322600 4059 886 1504 1548 6387 6387 DAAFQNVLTHVCLD 14 0 0 Unmodified _DAAFQNVLTHVCLD_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.3853 2 801.882672 1601.75079 NaN NaN NaN -0.23843 -0.0001912 NaN NaN NaN NaN 117.78 0.37201 117.78 117.56 117.93 -7.6294E-06 0 0 0 0.00046561 1 75379 79.201 67.669 1 4060 1920 1505 1549 6388 6388 DAAFQNVLTHVCLD 14 0 0 Unmodified _DAAFQNVLTHVCLD_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 802.3863 2 801.882672 1601.75079 NaN NaN NaN 0.25486 0.00020437 NaN NaN NaN NaN 129.41 0.38446 129.41 129.26 129.65 0 0 0 0 0.017908 1 78296 46.73 31.19 1 4061 1920 1505 1549 6389 6389 DAAFQNVLTHVCLD 14 0 0 Unmodified _DAAFQNVLTHVCLD_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 802.386 2 801.882672 1601.75079 NaN NaN NaN 0.63609 0.00051007 NaN NaN NaN NaN 129.32 0.3748 129.32 129.14 129.52 0 0 0 0 0.042623 1 77280 39.785 32.657 1 4062 1920 1505 1549 6390 6390 DAAGIAMEAIAFAR 14 0 1 Oxidation (M) _DAAGIAM(ox)EAIAFAR_ DAAGIAM(1)EAIAFAR DAAGIAM(47.89)EAIAFAR 0 1 0 Q6IAX9;P08240;A0A024R3M0 Q6IAX9 Q6IAX9 SRPR Signal recognition particle receptor subunit alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.8604 2 711.855926 1421.6973 NaN NaN NaN -0.5098 -0.00036291 NaN NaN NaN NaN 112.39 0.37707 112.39 112.2 112.57 0 0 0 0 0.0050416 1 70977 47.894 40.245 1 NaN NaN 0 2660900 0 2660900 4063 1455 1506 1550 6391 6391 1165 DAAGIAMEAIAFAR 14 0 1 Oxidation (M) _DAAGIAM(ox)EAIAFAR_ DAAGIAM(1)EAIAFAR DAAGIAM(53.57)EAIAFAR 0 1 0 Q6IAX9;P08240;A0A024R3M0 Q6IAX9 Q6IAX9 SRPR Signal recognition particle receptor subunit alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.861 2 711.855926 1421.6973 NaN NaN NaN 0.60061 0.00042755 NaN NaN NaN NaN 111.93 0.4277 111.93 111.69 112.11 0 0 0 0 0.0024295 2 72343 53.569 42.739 1 NaN NaN 0 3000600 0 3000600 4064 1455 1506 1550 6392;6393 6393 1165 DAALATALGDK 11 1 0 Unmodified _DAALATALGDK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.2802 2 523.279846 1044.54514 84975.42 0.37164 0.00019447 0.43194 0.00022603 0.80358 0.00042049 523.280060757487 527.286995439316 61.261 0.71433 61.261 60.926 61.641 3.8147E-06 194 52 6 0 0 0 0.0084432 1 34901 50.791 1.0762 1 1.1384 1.2272 0 34020000 14492000 19528000 4065 1502 1507 1551 6394 6394 DAALATALGDKK 12 2 0 Unmodified _DAALATALGDKK_ 0 0 1 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.8295 2 587.327328 1172.6401 78141.46 0.89382 0.00052497 -0.20346 -0.0001195 0.69036 0.00040547 587.327055728327 595.341463410123 41.432 0.52486 41.432 41.21 41.735 0 182 45 7 0 0 0 0.00017629 2 21785 95.483 70.417 1 1.1628 1.3727 0 55795000 22762000 33034000 4066 1502 1508 1552 6395;6396 6395 DAALATALGDKK 12 2 0 Unmodified _DAALATALGDKK_ 0 0 1 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.3278 2 587.327328 1172.6401 79211.2 0.67433 0.00039605 -0.61386 -0.00036053 0.060472 3.5517E-05 587.327059430048 595.340853898065 40.26 0.4048 40.26 40.1 40.505 0 146 34 6 0 0 0 0.0003652 1 21429 82.417 58.387 1 1.2415 1.4424 0 120410000 55350000 65063000 4067 1502 1508 1552 6397 6397 DAALATALGDKK 12 2 0 Unmodified _DAALATALGDKK_ 0 0 1 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.3422 2 587.327328 1172.6401 79355.11 0.32213 0.0001892 0.087062 5.1134E-05 0.40919 0.00024033 587.327220438983 595.341694572192 46.961 0.4554 46.961 46.739 47.194 -3.8147E-06 150 35 6 0 0 0 0.00088225 2 22629 69.672 52.198 1 1.7561 1.5165 0 4730600 1752700 2977900 4068 1502 1508 1552 6398;6399 6398 DAALATALGDKK 12 2 0 Unmodified _DAALATALGDKK_ 0 0 1 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.3421 2 587.327328 1172.6401 78815.04 0.20236 0.00011885 0.1108 6.5078E-05 0.31316 0.00018393 587.327298459741 595.341679060604 46.936 0.41581 46.936 46.747 47.163 0 133 31 6 0 0 0 0.00035108 1 22144 80.706 60.419 1 1.7765 1.5027 0 6930900 2340700 4590200 4069 1502 1508 1552 6400 6400 DAANLLNDALAIR 13 0 1 Unmodified _DAANLLNDALAIR_ 0 0 0 Q7Z5D5;Q7RTQ9;Q7RTQ7;G5E9S8;G3V2E7;B5BU63;F8W6L3;B4DGB3;Q7RTQ8;Q7RTQ2;G3V3H3;Q7RTQ1;Q7RTQ0;Q7RTQ4;G3V5R9;Q7RTP8;E7EVH7;B4DS14;Q07866 Q7Z5D5 Q7Z5D5 KNS2;KLC1 Kinesin light chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.3784 2 685.37534 1368.73613 NaN NaN NaN 0.023309 1.5976E-05 NaN NaN NaN NaN 118.13 0.35236 118.13 118.01 118.36 0 0 0 0 1.5131E-05 2 77611 94.616 59.895 1 NaN NaN 0 4684700 0 4684700 4070 972 1509 1553 6401;6402 6401 DAASAGLGSIGVK 13 1 0 Unmodified _DAASAGLGSIGVK_ 0 0 0 A0A024QZH6;Q9H7N4 A0A024QZH6 A0A024QZH6 SR-A1;SCAF1 Splicing factor, arginine/serine-rich 19 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.3123 2 573.311677 1144.6088 NaN NaN NaN 1.2361 0.00070865 NaN NaN NaN NaN 69.079 0.58086 69.079 68.669 69.25 -7.6294E-06 0 0 0 0.004753 1 41070 60.255 33.001 1 NaN NaN 0 12570000 12570000 0 4071 22 1510 1554 6403 6403 DADDAVYELDGK 12 1 0 Unmodified _DADDAVYELDGK_ 0 0 0 A0A024R6D8;Q59EK7;Q13243;B4DJK0;B4DUA4;G3V5K8;B5BUD8 A0A024R6D8 A0A024R6D8 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.7902 2 655.790972 1309.56739 76633.95 1.1012 0.00072215 -0.37234 -0.00024417 0.72885 0.00047798 655.790316040106 659.79795380468 60.339 0.53876 60.339 60.04 60.579 -3.8147E-06 227 47 6 0 0 0 3.9237E-23 2 34338 160.53 158.5 1 1.1768 1.2747 0 43790000 21098000 22692000 4072 202 1511 1555 6404;6405 6405 DADDAVYELDGK 12 1 0 Unmodified _DADDAVYELDGK_ 0 0 0 A0A024R6D8;Q59EK7;Q13243;B4DJK0;B4DUA4;G3V5K8;B5BUD8 A0A024R6D8 A0A024R6D8 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.7986 2 655.790972 1309.56739 79364.14 0.43938 0.00028814 0.086085 5.6454E-05 0.52546 0.00034459 655.790913438789 659.798292816544 66.436 0.90533 66.436 66.164 67.07 0 282 70 6 0 0 0 4.1983E-18 2 38280 146.11 141.9 1 1.0913 1.1208 0 17529000 8219000 9309800 4073 202 1511 1555 6406;6407 6406 DADDAVYELDGK 12 1 0 Unmodified _DADDAVYELDGK_ 0 0 0 A0A024R6D8;Q59EK7;Q13243;B4DJK0;B4DUA4;G3V5K8;B5BUD8 A0A024R6D8 A0A024R6D8 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.8629 2 655.790972 1309.56739 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.652 1 60.652 60.152 61.152 3.8147E-06 0 0 0 0.0061499 1 34616 62.466 51.247 1 4074 202 1511 1555 6408 6408 DADDAVYELDGK 12 1 0 Unmodified _DADDAVYELDGK_ 0 0 0 A0A024R6D8;Q59EK7;Q13243;B4DJK0;B4DUA4;G3V5K8;B5BUD8 A0A024R6D8 A0A024R6D8 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.7995 2 655.790972 1309.56739 76140.86 0.66856 0.00043843 0.2617 0.00017162 0.93026 0.00061006 655.790788525791 659.798335131479 59.428 0.8656 59.428 59.185 60.05 0 298 76 6 0 0 0 1.1073E-05 2 34479 107.55 105.96 1 1.2538 1.4023 0 53539000 22264000 31275000 4075 202 1511 1555 6409;6410 6410 DADDAVYELDGK 12 1 0 Unmodified _DADDAVYELDGK_ 0 0 0 A0A024R6D8;Q59EK7;Q13243;B4DJK0;B4DUA4;G3V5K8;B5BUD8 A0A024R6D8 A0A024R6D8 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.7905 2 655.790972 1309.56739 78287.52 0.45781 0.00030023 -0.075192 -4.931E-05 0.38262 0.00025092 655.79035183063 659.79839554547 65.829 1.0302 65.829 65.324 66.354 0 281 86 4 0 0 0 9.1081E-06 2 38858 108.47 105.36 1 1.0791 1.1415 0 20189000 9949300 10239000 4076 202 1511 1555 6411;6412 6412 DADDAVYELDGK 12 1 0 Unmodified _DADDAVYELDGK_ 0 0 0 A0A024R6D8;Q59EK7;Q13243;B4DJK0;B4DUA4;G3V5K8;B5BUD8 A0A024R6D8 A0A024R6D8 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.2934 2 655.790972 1309.56739 75951.3 0.55378 0.00036316 0.081878 5.3695E-05 0.63566 0.00041686 655.790489074059 659.798203793715 69.363 0.4691 69.363 69.117 69.586 0 90 31 5 0 0 0 0.00022287 2 36379 83.397 82.706 1 0.84121 0.65698 0 3261700 1835200 1426500 4077 202 1511 1555 6413;6414 6413 DADDAVYELNGK 12 1 0 Unmodified _DADDAVYELNGK_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;B4DEM8;V9HVZ0;A8K588;Q13247;Q59GY3;B5BU15 A8K644;V9HVZ0 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6;SFRS6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.306 2 655.298964 1308.58338 NaN NaN NaN 0.08022 5.2568E-05 NaN NaN NaN NaN 58.885 0.83269 58.885 58.504 59.337 0 0 0 0 3.5439E-28 1 33321 145.34 134.51 1 NaN NaN 0 21982000 0 21982000 4078 748;755 1512 1556 6415 6415 DADDAVYELNGK 12 1 0 Unmodified _DADDAVYELNGK_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;B4DEM8;V9HVZ0;A8K588;Q13247;Q59GY3;B5BU15 A8K644;V9HVZ0 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6;SFRS6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.3067 2 655.298964 1308.58338 NaN NaN NaN 0.54218 0.00035529 NaN NaN NaN NaN 58.264 0.64178 58.264 57.821 58.463 3.8147E-06 0 0 0 4.3404E-08 1 33601 105.86 95.034 1 NaN NaN 0 24356000 0 24356000 4079 748;755 1512 1556 6416 6416 DADDAVYELNGK 12 1 0 Unmodified _DADDAVYELNGK_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;B4DEM8;V9HVZ0;A8K588;Q13247;Q59GY3;B5BU15 A8K644;V9HVZ0 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6;SFRS6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.2996 2 655.298964 1308.58338 77090.14 0.67807 0.00044434 0.4369 0.0002863 1.115 0.00073064 655.299542069971 659.306501803531 67.993 0.72449 67.993 67.703 68.427 0 136 48 5 0 0 0 0.0034382 1 35432 56.043 55.466 1 0.78611 0.66573 0 1461600 780340 681230 4080 748;755 1512 1556 6417 6417 DADPILISLR 10 0 1 Unmodified _DADPILISLR_ 0 0 0 Q9NSK3;A0A024R5K1;Q9BR76 Q9NSK3 Q9NSK3 DKFZp762I166;CORO1B Coronin;Coronin-1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.8237 2 556.819138 1111.62372 83546.42 0.69484 0.0003869 0.16932 9.4281E-05 0.86416 0.00048118 556.819322143693 561.823107623734 106.92 0.58188 106.92 106.62 107.2 -7.6294E-06 174 43 6 0 0 0 0.0014097 3 66405 84.213 68.551 1 1.7718 1.8625 0 11507000 4133000 7373700 4081 184 1513 1557 6418;6419;6420 6419 DADPILISLR 10 0 1 Unmodified _DADPILISLR_ 0 0 0 Q9NSK3;A0A024R5K1;Q9BR76 Q9NSK3 Q9NSK3 DKFZp762I166;CORO1B Coronin;Coronin-1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.8192 2 556.819138 1111.62372 84428.8 0.82799 0.00046104 -0.13646 -7.5982E-05 0.69153 0.00038506 556.819129034962 561.823166465309 106.26 0.66463 106.26 106.01 106.67 0 158 51 4 0 0 0 0.0080272 2 67615 61.161 49.114 1 1.718 1.7261 0 11153000 3154700 7998700 4082 184 1513 1557 6421;6422 6422 DADPILISLR 10 0 1 Unmodified _DADPILISLR_ 0 0 0 Q9NSK3;A0A024R5K1;Q9BR76 Q9NSK3 Q9NSK3 DKFZp762I166;CORO1B Coronin;Coronin-1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.8228 2 556.819138 1111.62372 82795.36 0.79221 0.00044112 0.060807 3.3859E-05 0.85302 0.00047498 556.81938261786 561.82314405521 118.17 0.57162 118.17 117.92 118.49 -7.6294E-06 77 23 5 0 0 0 0.048308 1 69679 44.425 31.898 1 3.789 3.2841 0 2039400 462610 1576800 4083 184 1513 1557 6423 6423 DADPILISLR 10 0 1 Unmodified _DADPILISLR_ 0 0 0 Q9NSK3;A0A024R5K1;Q9BR76 Q9NSK3 Q9NSK3 DKFZp762I166;CORO1B Coronin;Coronin-1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.8234 2 556.819138 1111.62372 83781.77 0.58144 0.00032375 -0.14859 -8.2736E-05 0.43285 0.00024102 556.819061594056 561.823121444719 118.03 0.59206 118.03 117.76 118.36 0 65 26 4 0 0 0 0.043606 1 68663 45.598 29.936 1 3.4393 3.0591 0 1939800 454510 1485300 4084 184 1513 1557 6424 6424 DADSITLFDVQQK 13 1 0 Unmodified _DADSITLFDVQQK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.3698 2 740.369921 1478.72529 66465.75 1.0362 0.0007672 -1.2514 -0.00092649 -0.21514 -0.00015928 740.369484883977 744.87750994673 112.35 0.64478 112.35 112.01 112.66 -7.6294E-06 179 36 8 0 0 0 0.0033389 1 65299 63.624 52.867 1 1.7911 1.4209 0 10216000 3519900 6696500 4085 1607 1514 1558 6425 6425 DADSSISVLEIHSQK 15 1 0 Unmodified _DADSSISVLEIHSQK_ 0 0 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.918 2 814.909941 1627.80533 68265.42 0.78703 0.00064136 -0.2345 -0.00019109 0.55253 0.00045027 814.91006816979 818.917499515475 71.787 0.63008 71.787 71.388 72.018 0 221 53 6 0 0 0 4.7844E-10 1 41887 112.84 112.84 1 0.41917 0.41219 0 23645000 17170000 6475500 4086 1991 1515 1559 6426 6426 DADSSISVLEIHSQK 15 1 0 Unmodified _DADSSISVLEIHSQK_ 0 0 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.4107 2 814.909941 1627.80533 68478.81 0.72357 0.00058964 -0.56459 -0.00046009 0.15898 0.00012956 814.909974035736 819.417864635466 70.485 0.66173 70.485 70.126 70.787 0 226 54 6 0 0 0 2.0197E-07 3 42202 108.56 107.09 1 0.45231 0.47561 0 23917000 15115000 8802200 4087 1991 1515 1559 6427;6428;6429 6428 DAEAWFNEK 9 1 0 Unmodified _DAEAWFNEK_ 0 0 0 CON__P13645;P13645;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8 CON__P13645 CON__P13645 KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.2486 2 555.248546 1108.48254 NaN NaN NaN 0.04362 2.422E-05 NaN NaN NaN NaN 69.223 1.3936 69.223 68.603 69.997 0 0 0 0 6.7183E-17 2 40419 150.05 113.03 1 NaN NaN 0 136270000 136270000 0 + 4088 1161 1516 1560 6430;6431 6431 DAEAWFNEK 9 1 0 Unmodified _DAEAWFNEK_ 0 0 0 CON__P13645;P13645;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8 CON__P13645 CON__P13645 KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.2489 2 555.248546 1108.48254 NaN NaN NaN -0.0070519 -3.9156E-06 NaN NaN NaN NaN 68.285 1.4509 68.285 67.592 69.042 0 0 0 0 1.8526E-05 1 40646 111.74 86.816 1 NaN NaN 0 136700000 136700000 0 + 4089 1161 1516 1560 6432 6432 DAEAWFNEK 9 1 0 Unmodified _DAEAWFNEK_ 0 0 0 CON__P13645;P13645;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8 CON__P13645 CON__P13645 KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.2489 2 555.248546 1108.48254 NaN NaN NaN 0.17192 9.5458E-05 NaN NaN NaN NaN 78.688 2.067 78.688 78.147 80.214 -7.6294E-06 0 0 0 0.010039 2 42134 66.692 40.72 1 NaN NaN 0 33046000 33046000 0 + 4090 1161 1516 1560 6433;6434 6433 DAEAWFNEK 9 1 0 Unmodified _DAEAWFNEK_ 0 0 0 CON__P13645;P13645;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8 CON__P13645 CON__P13645 KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.2489 2 555.248546 1108.48254 NaN NaN NaN 0.14806 8.2209E-05 NaN NaN NaN NaN 79.065 1.8413 79.065 78.594 80.435 0 0 0 0 0.001033 2 41515 88.37 69.587 1 NaN NaN 0 24923000 24923000 0 + 4091 1161 1516 1560 6435;6436 6435 DAEDALHNLDR 11 0 1 Unmodified _DAEDALHNLDR_ 0 0 0 Q5JRI1;Q53GD7;A0A0S2Z504;O75494 Q5JRI1 Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.7969 2 634.796923 1267.57929 75991.59 0.59329 0.00037662 0.093681 5.9468E-05 0.68697 0.00043609 634.796810979119 639.80106734185 49.736 0.57809 49.736 49.414 49.992 0 179 39 6 0 0 0 2.616E-17 2 27339 160.91 160.91 1 1.0976 1.2193 0 72016000 33126000 38889000 4092 574 1517 1561 6437;6438 6438 DAEDALHNLDR 11 0 1 Unmodified _DAEDALHNLDR_ 0 0 0 Q5JRI1;Q53GD7;A0A0S2Z504;O75494 Q5JRI1 Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.799 2 634.796923 1267.57929 76107.13 0.86728 0.00055055 0.13298 8.4418E-05 1.0003 0.00063496 634.796870240925 639.801232783223 48.309 0.70715 48.309 48.106 48.813 0 227 51 6 0 0 0 3.0027E-23 2 26935 172.21 172.21 1 1.144 1.3141 0 78372000 35143000 43229000 4093 574 1517 1561 6439;6440 6440 DAEDALHNLDR 11 0 1 Unmodified _DAEDALHNLDR_ 0 0 0 Q5JRI1;Q53GD7;A0A0S2Z504;O75494 Q5JRI1 Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.7968 2 634.796923 1267.57929 77306.68 0.57891 0.00036749 -0.4118 -0.00026141 0.16711 0.00010608 634.796632492377 639.801152680739 57.229 0.41234 57.229 56.996 57.408 0 119 31 5 0 0 0 0.0056633 1 28904 55.806 55.806 1 0.8707 0.72779 0 3491700 1680200 1811500 4094 574 1517 1561 6441 6441 DAEDALHNLDR 11 0 1 Unmodified _DAEDALHNLDR_ 0 0 0 Q5JRI1;Q53GD7;A0A0S2Z504;O75494 Q5JRI1 Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.8015 2 634.796923 1267.57929 77210.31 0.62293 0.00039544 -0.41379 -0.00026267 0.20915 0.00013277 634.79666876217 639.800943630785 57.702 0.4696 57.702 57.517 57.987 0 133 34 5 0 0 0 0.0048085 2 28680 57.348 57.348 1 0.79151 0.69952 0 3705200 1852200 1853000 4095 574 1517 1561 6442;6443 6443 DAEDALHNLDRK 12 1 1 Unmodified _DAEDALHNLDRK_ 0 0 1 Q5JRI1;Q53GD7;A0A0S2Z504;O75494 Q5JRI1 Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2322 3 466.232028 1395.67426 89111.42 0.25153 0.00011727 -0.64482 -0.00030064 -0.39329 -0.00018336 466.231849825521 472.23904158817 35.916 0.34388 35.916 35.748 36.092 0 70 27 5 0 0 0 0.02884 1 18437 23.049 17.833 1 1.4244 1.6121 0 16111000 6122700 9988700 4096 574 1518 1562 6444 6444 DAEDAMDAMDGAVLDGR 17 0 1 2 Oxidation (M) _DAEDAM(ox)DAM(ox)DGAVLDGR_ DAEDAM(1)DAM(1)DGAVLDGR DAEDAM(103.85)DAM(103.85)DGAVLDGR 0 2 0 J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KUY1 J3QL05 J3QL05 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.3641 2 892.359098 1782.70364 NaN NaN NaN 0.22739 0.00020291 NaN NaN NaN NaN 50.731 0.70441 50.731 50.406 51.11 3.8147E-06 0 0 0 2.0236E-10 2 27887 103.85 103.16 1 NaN NaN 0 13050000 0 13050000 4097 258 1519 1563 6445;6446 6445 191;192 DAEDAMDAMDGAVLDGR 17 0 1 2 Oxidation (M) _DAEDAM(ox)DAM(ox)DGAVLDGR_ DAEDAM(1)DAM(1)DGAVLDGR DAEDAM(81.49)DAM(81.49)DGAVLDGR 0 2 0 J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KUY1 J3QL05 J3QL05 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.3625 2 892.359098 1782.70364 NaN NaN NaN 0.29585 0.000264 NaN NaN NaN NaN 50.907 0.53864 50.907 50.844 51.383 0 0 0 0 2.4485E-07 2 28372 81.494 79.826 1 NaN NaN 0 9373600 0 9373600 4098 258 1519 1563 6447;6448 6448 191;192 DAEDAMDAMDGAVLDGR 17 0 1 2 Oxidation (M) _DAEDAM(ox)DAM(ox)DGAVLDGR_ DAEDAM(1)DAM(1)DGAVLDGR DAEDAM(135.58)DAM(135.58)DGAVLDGR 0 2 0 J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KUY1 J3QL05 J3QL05 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.3644 2 892.359098 1782.70364 NaN NaN NaN -0.44643 -0.00039838 NaN NaN NaN NaN 49.914 0.99374 49.914 49.438 50.432 -3.8147E-06 0 0 0 3.765E-27 2 28403 135.58 132.4 1 NaN NaN 0 14592000 0 14592000 4099 258 1519 1563 6449;6450 6450 191;192 DAEDAMDAMDGAVLDGR 17 0 1 2 Oxidation (M) _DAEDAM(ox)DAM(ox)DGAVLDGR_ DAEDAM(1)DAM(1)DGAVLDGR DAEDAM(90.73)DAM(90.73)DGAVLDGR 0 2 0 J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KUY1 J3QL05 J3QL05 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.4224 2 892.359098 1782.70364 NaN NaN NaN -0.4135 -0.00036899 NaN NaN NaN NaN 49.945 0.18184 49.945 49.863 50.045 0 0 0 0 5.0324E-08 1 28111 90.731 90.467 1 NaN NaN 0 3500200 3500200 0 4100 258 1519 1563 6451 6451 191;192 DAEDAMDAMDGAVLDGR 17 0 1 2 Oxidation (M) _DAEDAM(ox)DAM(ox)DGAVLDGR_ DAEDAM(1)DAM(1)DGAVLDGR DAEDAM(88.55)DAM(88.55)DGAVLDGR 0 2 0 J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KUY1 J3QL05 J3QL05 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.3593 2 892.359098 1782.70364 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.818 1 49.818 49.318 50.318 0 0 0 0 2.2023E-05 1 28078 88.552 87.181 1 4101 258 1519 1563 6452 6452 191;192 DAEDAVYGR 9 0 1 Unmodified _DAEDAVYGR_ 0 0 0 J3KTL2;Q07955;Q59FA2 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.2297 2 498.225071 994.435589 85644.2 0.20059 9.9939E-05 0.15923 7.9331E-05 0.35982 0.00017927 498.225128118753 503.229058129557 27.509 0.52072 27.509 27.295 27.816 0 146 33 6 0 0 0 0.00063538 1 12627 96.492 78.506 1 1.2848 1.4158 0 55064000 23585000 31479000 4102 1333 1520 1564 6453 6453 DAEDWFFSK 9 1 0 Unmodified _DAEDWFFSK_ 0 0 0 CON__Q04695;Q04695;F5GWP8;Q14666;K7ESE1 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.7509 2 572.750921 1143.48729 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.2 1 102.2 101.7 102.7 0 0 0 0 0.0055262 1 64468 67.993 63.856 1 + 4103 1168 1521 1565 6454 6454 DAEDWFFSK 9 1 0 Unmodified _DAEDWFFSK_ 0 0 0 CON__Q04695;Q04695;F5GWP8;Q14666;K7ESE1 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.7503 2 572.750921 1143.48729 80501.25 0.92392 0.00052917 -0.46741 -0.00026771 0.45651 0.00026147 572.750544819318 576.757647951724 114.14 0.61035 114.14 113.84 114.45 0 87 25 5 0 0 0 0.01379 1 66563 56.258 53.86 1 0.61805 0.5231 0 1455800 906980 548800 + 4104 1168 1521 1565 6455 6455 DAEDWFFSK 9 1 0 Unmodified _DAEDWFFSK_ 0 0 0 CON__Q04695;Q04695;F5GWP8;Q14666;K7ESE1 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.7512 2 572.750921 1143.48729 81444.09 0.58519 0.00033517 -0.069086 -3.9569E-05 0.5161 0.0002956 572.750924780704 576.757900589752 114.16 0.61501 114.16 113.91 114.52 7.6294E-06 68 25 4 0 0 0 0.021043 1 65756 49.715 47.291 1 0.55654 0.4647 0 1534600 892380 642240 + 4105 1168 1521 1565 6456 6456 DAEEDDDTGGINLHK 15 1 0 Unmodified _DAEEDDDTGGINLHK_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.8629 2 814.855363 1627.69617 68485.87 0.43115 0.00035133 0.21409 0.00017445 0.64524 0.00052578 814.855462901127 818.862403903927 34.496 0.33943 34.496 34.304 34.644 0 74 25 5 0 0 0 0.00022059 2 17198 64.64 61.417 1 0.91952 0.90489 0 19847000 10136000 9710700 4106 1708 1522 1566 6457;6458 6458 DAEEDDDTGGINLHK 15 1 0 Unmodified _DAEEDDDTGGINLHK_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.3667 2 814.855363 1627.69617 68526.55 0.57481 0.00046839 0.12537 0.00010216 0.70018 0.00057054 814.855594437978 818.862461509964 33.704 0.31387 33.704 33.555 33.869 0 81 24 5 0 0 0 4.4834E-10 1 16905 113.63 107.6 1 0.89115 0.88968 0 14200000 7016000 7184100 4107 1708 1522 1566 6459 6459 DAEEDDDTGGINLHK 15 1 0 Unmodified _DAEEDDDTGGINLHK_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.855 2 814.855363 1627.69617 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.598 1 33.598 33.098 34.098 0 0 0 0 0.0007363 1 16869 78.342 70.961 1 4108 1708 1522 1566 6460 6460 DAEEDDDTGGINLHK 15 1 0 Unmodified _DAEEDDDTGGINLHK_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 815.3569 2 814.855363 1627.69617 67820.8 0.4163 0.00033922 0.054467 4.4383E-05 0.47076 0.0003836 815.35665209046 818.862558328624 39.776 0.39487 39.776 39.579 39.973 0 150 31 6 0 0 0 0.020383 1 17693 42.976 39.753 1 0.98536 0.79782 0 2963700 1583000 1380700 4109 1708 1522 1566 6461 6461 DAEEWFFTK 9 1 0 Unmodified _DAEEWFFTK_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.7668 2 586.766571 1171.51859 NaN NaN NaN 0.34026 0.00019965 NaN NaN NaN NaN 102.03 1.0156 102.03 101.43 102.45 0 0 0 0 0.0085799 1 62971 67.897 57.483 1 NaN NaN 0 17773000 17773000 0 + 4110 1150 1523 1567 6462 6462 DAEEWFFTK 9 1 0 Unmodified _DAEEWFFTK_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.7668 2 586.766571 1171.51859 NaN NaN NaN 0.34483 0.00020233 NaN NaN NaN NaN 101.15 1.0771 101.15 100.74 101.82 0 0 0 0 0.0025812 1 63751 80.219 69.346 1 NaN NaN 0 26696000 26696000 0 + 4111 1150 1523 1567 6463 6463 DAEEWFFTK 9 1 0 Unmodified _DAEEWFFTK_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.7669 2 586.766571 1171.51859 NaN NaN NaN 0.2609 0.00015309 NaN NaN NaN NaN 113.56 0.75208 113.56 113.22 113.98 0 0 0 0 0.0076479 1 65301 69.812 59.398 1 NaN NaN 0 3167100 3167100 0 + 4112 1150 1523 1567 6464 6464 DAEGSTCLHLAAK 13 1 0 Unmodified _DAEGSTCLHLAAK_ 0 0 0 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48;A0A1B0GWF6;A0A0D9SFD7;A0A0D9SEY2;A0A0D9SFM6;A0A1B0GTP4 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.8306 2 686.829908 1371.64526 NaN NaN NaN 1.3086 0.00089882 NaN NaN NaN NaN 43.052 0.32849 43.052 42.937 43.265 0 0 0 0 0.041457 1 20248 41.164 26.484 1 NaN NaN 0 713030 713030 0 4113 631 1524 1568 6465 6465 DAEQEGEGGGIITR 14 0 1 Unmodified _DAEQEGEGGGIITR_ 0 0 0 A0A1B0GUH9;A0A1P0AZG4;A0PJI9 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.3442 2 716.339152 1430.66375 73082.14 0.73565 0.00052697 -0.095636 -6.8508E-05 0.64001 0.00045847 716.339566796675 721.343081270628 40.855 0.43263 40.855 40.717 41.15 0 133 36 5 0 0 0 4.8299E-05 1 21382 93.345 83.857 1 1.5579 1.5875 0 14807000 4341300 10466000 4114 630 1525 1569 6466 6466 DAEQEGEGGGIITR 14 0 1 Unmodified _DAEQEGEGGGIITR_ 0 0 0 A0A1B0GUH9;A0A1P0AZG4;A0PJI9 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.3428 2 716.339152 1430.66375 71828.63 0.4849 0.00034736 0.33808 0.00024218 0.82298 0.00058954 716.339671092604 721.343123046264 46.816 0.68038 46.816 46.514 47.194 3.8147E-06 140 47 5 0 0 0 0.00022654 1 22518 65.563 61.918 1 3.7013 3.0932 0 3426100 816930 2609200 4115 630 1525 1569 6467 6467 DAEQEGEGGGIITR 14 0 1 Unmodified _DAEQEGEGGGIITR_ 0 0 0 A0A1B0GUH9;A0A1P0AZG4;A0PJI9 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.3434 2 716.339152 1430.66375 70641.99 0.33251 0.00023819 0.37501 0.00026863 0.70752 0.00050683 716.339494095669 721.343270858417 47.15 0.83894 47.15 46.822 47.661 -3.8147E-06 209 64 5 0 0 0 0.00011616 1 22259 82.505 73.551 1 2.7976 2.369 0 3041800 774560 2267300 4116 630 1525 1569 6468 6468 DAETWFLSK 9 1 0 Unmodified _DAETWFLSK_ 0 0 0 CON__P08779;P08779;Q16195;K7ENW6 CON__P08779 CON__P08779 KRT16;keratin Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.769 2 548.769114 1095.52368 NaN NaN NaN 0.050829 2.7894E-05 NaN NaN NaN NaN 94.8 0.75617 94.8 94.521 95.277 0 0 0 0 0.049504 1 57469 47.187 16.113 1 NaN NaN 0 11040000 11040000 0 + 4117 1159 1526 1570 6469 6469 DAFLGSFLYEYSR 13 0 1 Unmodified _DAFLGSFLYEYSR_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.3759 2 784.375006 1566.73546 NaN NaN NaN -0.098322 -7.7121E-05 NaN NaN NaN NaN 124.87 0.52641 124.87 124.65 125.18 0 0 0 0 0.0043355 1 81014 61.815 45.184 1 NaN NaN 0 5386500 5386500 0 + 4118 1153 1527 1571 6470 6470 DAFLGSFLYEYSR 13 0 1 Unmodified _DAFLGSFLYEYSR_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.3762 2 784.375006 1566.73546 NaN NaN NaN -0.3203 -0.00025124 NaN NaN NaN NaN 124.55 0.58844 124.55 124.26 124.85 -7.6294E-06 0 0 0 0.053843 1 82682 39.625 29.101 1 NaN NaN 0 6423800 6423800 0 + 4119 1153 1527 1571 6471 6471 DAFPVAGQK 9 1 0 Unmodified _DAFPVAGQK_ 0 0 0 P54727;B4DEA3;Q53F10;B7Z4W4;Q5W0S5;B7ZA74;Q5W0S4;K7ENJ0;K7ELW1;A8K1J3;A0A024R7G8;P54725 P54727 P54727 RAD23B;RAD23A UV excision repair protein RAD23 homolog B;UV excision repair protein RAD23 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.7527 2 466.745442 931.476331 88405.67 0.25751 0.00012019 -0.45546 -0.00021259 -0.19795 -9.2392E-05 466.745244755273 470.752389446467 44.83 0.64175 44.83 44.499 45.14 0 270 49 8 0 0 0 0.056712 1 21278 36.395 31.801 1 0.90107 0.71077 0 5930500 2985600 2944900 4120 1610 1528 1572 6472 6472 DAGEGGLSLAIEGPSK 16 1 0 Unmodified _DAGEGGLSLAIEGPSK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4DTD5 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.8883 2 750.880652 1499.74675 67431.42 0.43303 0.00032515 0.029709 2.2308E-05 0.46273 0.00034746 750.88034896211 754.887740955932 88.467 0.51212 88.467 88.198 88.71 0 144 39 5 0 0 0 1.4466E-17 1 53287 131.13 131.13 1 1.1777 1.2685 0 33599000 15164000 18435000 4121 1504 1529 1573 6473 6473 DAGEGLLAVQITDPEGK 17 1 0 Unmodified _DAGEGLLAVQITDPEGK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.9463 2 856.938699 1711.86284 66020.51 0.93015 0.00079708 -0.4053 -0.00034731 0.52485 0.00044976 856.938362029528 860.945508596557 107.27 0.5497 107.27 106.9 107.45 0 85 36 4 0 0 0 0.00014443 1 68539 73.927 69.227 1 1.1608 1.2163 0 10739000 4283500 6455900 4122 1504 1530 1574 6474 6474 DAGEGLLAVQITDPEGKPK 19 2 0 Unmodified _DAGEGLLAVQITDPEGKPK_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.0308 2 969.512562 1937.01057 NaN NaN NaN 0.32561 0.00031568 NaN NaN NaN NaN 92.159 0.27348 92.159 92.04 92.313 0 0 0 0 2.9936E-09 1 55822 92.039 83.149 1 NaN NaN 0 6696600 0 6696600 4123 1504 1531 1575 6475 6475 DAGEGLLAVQITDPEGKPK 19 2 0 Unmodified _DAGEGLLAVQITDPEGKPK_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 978.0301 2 969.512562 1937.01057 NaN NaN NaN 0.38616 0.00037439 NaN NaN NaN NaN 91.462 0.36139 91.462 91.295 91.656 0 0 0 0 4.509E-12 1 56528 101.53 90.627 1 NaN NaN 0 4644000 0 4644000 4124 1504 1531 1575 6476 6476 DAGEGLLAVQITDQEGKPK 19 2 0 Unmodified _DAGEGLLAVQITDQEGKPK_ 0 0 1 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 993.0297 2 985.015469 1968.01638 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.239 1 85.239 84.739 85.739 0 0 0 0 0.00010647 1 51186 69.456 35.867 1 4125 1402 1532 1576 6477 6477 DAGEGLLAVQITDQEGKPK 19 2 0 Unmodified _DAGEGLLAVQITDQEGKPK_ 0 0 1 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 993.533 2 985.015469 1968.01638 NaN NaN NaN -0.20682 -0.00020372 NaN NaN NaN NaN 84.279 0.20944 84.279 84.134 84.343 0 0 0 0 4.509E-12 2 51724 101.53 64.685 1 NaN NaN 0 3853000 0 3853000 4126 1402 1532 1576 6478;6479 6479 DAGQISGLNVLR 12 0 1 Unmodified _DAGQISGLNVLR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8476 2 621.843676 1241.6728 77653.35 0.50955 0.00031686 -0.67952 -0.00042256 -0.16998 -0.0001057 621.843297053847 626.847299010565 102.48 0.86333 102.48 102.02 102.88 0 209 62 4 0 0 0 0.042463 1 58144 33.875 24.917 1 1.4311 1.2319 0 7289400 3132800 4156600 4127 1092 1533 1577 6480 6480 DAGTIAGLNVMR 12 0 1 Oxidation (M) _DAGTIAGLNVM(ox)R_ DAGTIAGLNVM(1)R DAGTIAGLNVM(66.43)R 0 1 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.316 2 617.316437 1232.61832 80644.35 0.49762 0.00030719 0.25607 0.00015808 0.75369 0.00046526 617.3164384858 622.321140359892 68.37 0.73861 68.37 67.977 68.715 0 187 64 4 0 0 0 0.00036106 1 39591 66.435 66.435 1 0.41732 0.41475 0 8197100 5593800 2603300 4128 1466 1534 1578 6481 6481 1178 DAGTIAGLNVMR 12 0 1 Oxidation (M) _DAGTIAGLNVM(ox)R_ DAGTIAGLNVM(1)R DAGTIAGLNVM(60.83)R 0 1 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.9734 2 617.316437 1232.61832 80235.05 0.42168 0.00026031 0.61405 0.00037906 1.0357 0.00063937 617.316543085412 622.321208279206 67.315 0.52083 67.315 67.107 67.627 0 125 41 4 0 0 0 0.011117 1 39842 60.828 49.115 1 0.50458 0.49635 0 14389000 8808200 5580800 4129 1466 1534 1578 6482 6482 1178 DAGVIAGLNVLR 12 0 1 Unmodified _DAGVIAGLNVLR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.3517 2 599.351137 1196.68772 78037.52 0.67541 0.00040481 0.21653 0.00012978 0.89195 0.00053459 599.351241992221 604.355343575938 110 0.78716 110 109.54 110.33 0 382 56 9 0 0 0 1.0904E-17 2 68824 138.98 112.19 1 0.77878 0.91027 0 202820000 119690000 83127000 4130 533 1535 1579 6483;6484 6484 DAGVIAGLNVLR 12 0 1 Unmodified _DAGVIAGLNVLR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.3517 2 599.351137 1196.68772 78256.42 0.69105 0.00041418 -0.0030283 -1.815E-06 0.68802 0.00041237 599.351153584519 604.355232707057 109.35 0.95182 109.35 108.91 109.86 7.6294E-06 404 66 9 0 0 0 1.0904E-17 1 70247 138.98 112.19 1 0.7902 0.90476 0 166680000 93650000 73030000 4131 533 1535 1579 6485 6485 DAGVIAGLNVLR 12 0 1 Unmodified _DAGVIAGLNVLR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.3529 2 599.351137 1196.68772 77348.12 0.72881 0.00043681 0.35899 0.00021516 1.0878 0.00065197 599.351183218273 604.355285968482 120.96 0.80959 120.96 120.55 121.36 -7.6294E-06 191 37 8 0 0 0 0.0001446 2 71986 93.178 88.482 1 1.0395 0.88031 0 31495000 16034000 15461000 4132 533 1535 1579 6486;6487 6487 DAGVIAGLNVLR 12 0 1 Unmodified _DAGVIAGLNVLR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;Q9UQC1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.356 2 599.351137 1196.68772 77200.83 0.78335 0.0004695 0.080993 4.8543E-05 0.86434 0.00051804 599.351005878578 604.355275539302 120.77 0.69908 120.77 120.47 121.17 7.6294E-06 220 33 9 0 0 0 0.00018339 2 70880 90.906 84.315 1 1.0755 0.93818 0 26338000 12797000 13542000 4133 533 1535 1579 6488;6489 6488 DAGYGGISLAVEGPSK 16 1 0 Unmodified _DAGYGGISLAVEGPSK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.8905 2 760.883195 1519.75184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.993 1 88.993 88.493 89.493 0 0 0 0 0.0065237 1 54905 50.088 39.258 1 4134 1402 1536 1580 6490 6490 DAGYGGLSLSIEGPSK 16 1 0 Unmodified _DAGYGGLSLSIEGPSK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5C6 P21333 P21333 FLNA;FLJ00119 Filamin-A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.8903 2 775.888478 1549.7624 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.02 1 97.02 96.52 97.52 0 0 0 0 0.00090886 1 60564 64.224 57.096 1 4135 1504 1537 1581 6491 6491 DAHLLVESK 9 1 0 Unmodified _DAHLLVESK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2777 2 506.277106 1010.53966 84788.22 0.41991 0.00021259 0.39531 0.00020013 0.81522 0.00041273 506.277076569045 510.284551028565 32.542 0.54083 32.542 32.193 32.734 3.8147E-06 190 47 6 0 0 0 2.536E-05 2 16159 113.62 85.404 1 2.2699 2.4541 0 35534000 12347000 23187000 4136 1207 1538 1582 6492;6493 6493 DAHLLVESK 9 1 0 Unmodified _DAHLLVESK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.2784 2 506.277106 1010.53966 84867.71 0.88094 0.000446 0.40606 0.00020558 1.287 0.00065158 506.277140760927 510.284451102357 31.687 0.35542 31.687 31.484 31.84 1.9073E-06 147 32 6 0 0 0 1.5218E-05 2 15744 122.33 102.63 1 2.2417 2.5188 0 74038000 20530000 53508000 4137 1207 1538 1582 6494;6495 6495 DAHLLVESK 9 1 0 Unmodified _DAHLLVESK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.2775 2 506.277106 1010.53966 87444.22 0.41999 0.00021263 -0.34171 -0.000173 0.078281 3.9632E-05 506.277007023441 510.283929172589 35.816 0.43473 35.816 35.56 35.995 0 106 36 4 0 0 0 0.026085 1 15543 47.603 40.383 1 1.4543 1.1592 0 1982500 787050 1195400 4138 1207 1538 1582 6496 6496 DAHQSLLATR 10 0 1 Unmodified _DAHQSLLATR_ 0 0 0 A0A024R5C5;P11498 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.3004 2 556.296362 1110.57817 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.015 1 30.015 29.515 30.515 1.9073E-06 0 0 0 7.3396E-06 1 14611 100.88 72.704 1 4139 176 1539 1583 6497 6497 DAIPENLPPLTADFAEDK 18 1 0 Unmodified _DAIPENLPPLTADFAEDK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 978.4835 2 978.48347 1954.95239 NaN NaN NaN -0.52395 -0.00051268 NaN NaN NaN NaN 129.23 0.80838 129.23 128.86 129.67 0 0 0 0 0.0042285 1 77322 47.774 35.797 1 NaN NaN 0 15669000 15669000 0 + 4140 1153 1540 1584 6498 6498 DAITQALFLR 10 0 1 Unmodified _DAITQALFLR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.3316 2 574.327131 1146.63971 79197.88 0.41287 0.00023712 0.051407 2.9524E-05 0.46427 0.00026664 574.327118257089 579.331214942989 114.4 0.7448 114.4 114.08 114.82 0 251 52 6 0 0 0 2.7092E-09 2 72465 126.41 85.383 1 0.95026 1.0203 0 46745000 23202000 23542000 4141 1827 1541 1585 6499;6500 6500 DAITQALFLR 10 0 1 Unmodified _DAITQALFLR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3318 2 574.327131 1146.63971 79837.05 0.56984 0.00032728 -0.13358 -7.6719E-05 0.43626 0.00025056 574.326963943761 579.331102835708 113.87 0.77428 113.87 113.53 114.3 0 282 56 8 0 0 0 9.7206E-05 2 73813 97.431 68.269 1 0.91676 1.0028 0 39584000 20324000 19259000 4142 1827 1541 1585 6501;6502 6502 DAITQALFLR 10 0 1 Unmodified _DAITQALFLR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.3317 2 574.327131 1146.63971 80155.63 0.72591 0.00041691 0.091896 5.2779E-05 0.8178 0.00046969 574.327112250448 579.331255860272 125.62 0.85333 125.62 125.25 126.1 7.6294E-06 172 35 8 0 0 0 1.5297E-05 2 75335 101.25 72.335 1 1.2776 1.043 0 14444000 6712600 7731000 4143 1827 1541 1585 6503;6504 6504 DAITQALFLR 10 0 1 Unmodified _DAITQALFLR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.3315 2 574.327131 1146.63971 79991.7 0.63259 0.00036331 0.037298 2.1421E-05 0.66989 0.00038473 574.327092103199 579.331222525437 125.43 0.75883 125.43 125.1 125.86 0 179 33 8 0 0 0 1.6847E-08 2 74330 122.52 78.709 1 1.2609 1.0503 0 15758000 6595400 9163000 4144 1827 1541 1585 6505;6506 6506 DALDGPAAEAEPEHSFDGLR 20 0 1 Unmodified _DALDGPAAEAEPEHSFDGLR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 703.3554 3 699.655502 2095.94468 71204.49 0.61504 0.00043032 -0.0053427 -3.7381E-06 0.6097 0.00042658 699.989663714254 702.991516689243 92.67 0.43758 92.67 92.468 92.906 0 73 23 5 0 0 0 0.0051892 1 51630 34.174 34.174 1 2.3414 2.0025 0 2759200 828120 1931000 4145 1754 1542 1586 6507 6507 DALNIETAIK 10 1 0 Unmodified _DALNIETAIK_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;A6NMY6;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3029 2 544.303321 1086.59209 81322.56 1.0009 0.00054481 -0.31595 -0.00017197 0.68498 0.00037284 544.302911346821 548.310123907094 84.649 0.49477 84.649 84.37 84.865 0 137 40 5 0 0 0 0.0017287 2 50665 72.325 54.417 1 0.92722 0.96875 0 15060000 7222600 7837200 4146 193 1543 1587 6508;6509 6509 DALNIETAIK 10 1 0 Unmodified _DALNIETAIK_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;A6NMY6;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.6061 2 544.303321 1086.59209 82600.93 0.74834 0.00040732 -0.14606 -7.9499E-05 0.60228 0.00032782 544.302866304933 548.310274719004 83.661 0.4537 83.661 83.449 83.902 0 131 36 5 0 0 0 0.045683 1 51216 61.65 45.988 1 1.3114 1.347 0 17837000 6913900 10923000 4147 193 1543 1587 6510 6510 DALNQATSQVESK 13 1 0 Unmodified _DALNQATSQVESK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.8517 2 695.84407 1389.67359 NaN NaN NaN 0.09182 6.3892E-05 NaN NaN NaN NaN 43.727 0.43321 43.727 43.553 43.987 -3.8147E-06 0 0 0 1.4385E-05 1 23921 95.162 75.376 1 NaN NaN 0 5904400 0 5904400 4148 471 1544 1588 6511 6511 DALNQATSQVESK 13 1 0 Unmodified _DALNQATSQVESK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 695.845 2 695.84407 1389.67359 73426.34 0.34803 0.00024217 -0.13192 -9.1798E-05 0.2161 0.00015037 695.844290917292 699.851042562562 52.663 0.81872 52.663 52.448 53.266 0 209 62 6 0 0 0 0.036591 2 25430 32.159 32.159 1 0.83124 0.67128 0 2553100 1335000 1218100 4149 471 1544 1588 6512;6513 6512 DALTLSLSEQVAAALK 16 1 0 Unmodified _DALTLSLSEQVAAALK_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.9575 2 815.456527 1628.8985 NaN NaN NaN -0.71089 -0.0005797 NaN NaN NaN NaN 129.28 0.19566 129.28 129.23 129.42 0 0 0 0 1.1672E-35 1 84291 151.98 69.559 1 NaN NaN 0 6013400 6013400 0 4150 1492 1545 1589 6514 6514 DALTLSLSEQVAAALK 16 1 0 Unmodified _DALTLSLSEQVAAALK_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.4546 2 815.456527 1628.8985 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.84 1 128.84 128.34 129.34 0 0 0 0 1.787E-18 1 86076 128.85 59.837 1 4151 1492 1545 1589 6515 6515 DANLTALAAIGPR 13 0 1 Unmodified _DANLTALAAIGPR_ 0 0 0 A0A0G2JRY5;O00268;V9GY03;B4DYT3;J3KTH2;A4PBF7;Q92750 A0A0G2JRY5 A0A0G2JRY5 TAF4;TAF4B;taf4b Transcription initiation factor TFIID subunit 4;Transcription initiation factor TFIID subunit 4B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3617 2 641.859326 1281.7041 NaN NaN NaN 0.35986 0.00023098 NaN NaN NaN NaN 102.68 0.37852 102.68 102.38 102.76 0 0 0 0 0.039559 1 64806 41.399 36.059 1 NaN NaN 0 4119300 4119300 0 4152 535 1546 1590 6516 6516 DANLYISGLPR 11 0 1 Unmodified _DANLYISGLPR_ 0 0 0 Q15717;M0QZR9;M0R055 Q15717 Q15717 ELAVL1 ELAV-like protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8324 2 609.827495 1217.64044 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.378 1 93.378 92.878 93.878 -7.6294E-06 0 0 0 0.00060333 1 56638 73.887 44.969 1 4153 1764 1547 1591 6517 6517 DANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPSR 34 0 1 Oxidation (M) _DANNFVLDEQTQQAPHLM(ox)PPPFLVDVDGNPHPSR_ DANNFVLDEQTQQAPHLM(1)PPPFLVDVDGNPHPSR DANNFVLDEQTQQAPHLM(64.27)PPPFLVDVDGNPHPSR 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.7141 4 953.708782 3810.80602 61885.23 0.85988 0.00082008 -0.60037 -0.00057258 0.25951 0.0002475 954.458909127141 956.711954464717 116.03 0.72746 116.03 115.64 116.37 0 358 46 14 0 0 0 3.2694E-19 2 73901 64.273 64.273 1 1.0941 1.1691 0 44787000 22511000 22276000 4154 1942 1548 1592 6518;6519 6519 1776 DANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPSR 34 0 1 Oxidation (M) _DANNFVLDEQTQQAPHLM(ox)PPPFLVDVDGNPHPSR_ DANNFVLDEQTQQAPHLM(1)PPPFLVDVDGNPHPSR DANNFVLDEQTQQAPHLM(90.94)PPPFLVDVDGNPHPSR 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 954.2107 4 953.708782 3810.80602 61397.31 0.69861 0.00066627 -0.28444 -0.00027127 0.41417 0.000395 953.959558694703 956.461482049682 115.39 0.8007 115.39 115.08 115.88 0 384 52 13 0 0 0 3.2483E-31 2 75200 90.944 90.944 1 0.89599 1.0338 0 71431000 43998000 27433000 4155 1942 1548 1592 6520;6521 6520 1776 DANSSFFDNSSSPHLLDQLK 20 1 0 Unmodified _DANSSFFDNSSSPHLLDQLK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3568 3 741.35019 2221.02874 73717.95 0.73762 0.00054684 0.59886 0.00044396 1.3365 0.0009908 741.684879711624 744.35582682658 104.95 0.56259 104.95 104.67 105.23 0 147 45 5 0 0 0 0.00033784 2 64939 35.421 35.421 1 1.3866 1.413 0 10391000 5304400 5086800 4156 1581 1549 1593 6522;6523 6523 DANSSFFDNSSSPHLLDQLK 20 1 0 Unmodified _DANSSFFDNSSSPHLLDQLK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.6856 3 741.35019 2221.02874 71546.92 0.80305 0.00059534 0.47919 0.00035525 1.2822 0.00095059 741.68501844623 744.355962462273 104.26 0.4285 104.26 104.05 104.48 -7.6294E-06 109 34 5 0 0 0 1.9852E-06 3 66070 53.585 51.111 1 1.569 1.6282 0 11228000 5986300 5241600 4157 1581 1549 1593 6524;6525;6526 6526 DAPAESVAYHAQNNPPVPPKPQPK 24 2 0 Unmodified _DAPAESVAYHAQNNPPVPPKPQPK_ 0 0 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.1118 3 851.434588 2551.28194 65634.53 0.8223 0.00070013 0.36288 0.00030897 1.1852 0.0010091 852.102639671477 856.777254531653 49.361 0.86835 49.361 48.978 49.847 0 278 58 8 0 0 0 1.0073E-11 3 27103 62.611 56.581 1 0.63128 0.7454 0 36752000 25322000 11429000 4158 878 1550 1594 6527;6528;6529 6528 DAPAESVAYHAQNNPPVPPKPQPK 24 2 0 Unmodified _DAPAESVAYHAQNNPPVPPKPQPK_ 0 0 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 851.4336 3 851.434588 2551.28194 65929.31 0.96588 0.00082239 0.26995 0.00022985 1.2358 0.0010522 851.435802399813 857.111348104375 48.274 0.95498 48.274 47.779 48.734 0 223 67 7 0 0 0 1.03E-06 3 26641 48.656 48.656 1 0.52924 0.60802 0 23299000 15582000 7717100 4159 878 1550 1594 6530;6531;6532 6530 DAPAESVAYHAQNNPPVPPKPQPK 24 2 0 Unmodified _DAPAESVAYHAQNNPPVPPKPQPK_ 0 0 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.111 3 851.434588 2551.28194 NaN NaN NaN 0.38455 0.00032742 NaN NaN NaN NaN 47.918 0.14021 47.918 47.852 47.993 0 0 0 0 1.5496E-05 2 26742 50.055 37.126 1 NaN NaN 0 5020300 0 5020300 4160 878 1550 1594 6533;6534 6534 DAPAESVAYHAQNNPPVPPKPQPK 24 2 0 Unmodified _DAPAESVAYHAQNNPPVPPKPQPK_ 0 0 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 851.4371 3 851.434588 2551.28194 66031.84 0.69976 0.0005958 0.24628 0.0002097 0.94604 0.00080549 851.768901773065 857.111824802999 57.513 1.3829 57.513 56.894 58.277 0 530 103 8 0 0 0 0.057955 1 29309 12.314 12.314 1 1.5755 1.3612 0 4472000 2001200 2470800 4161 878 1550 1594 6535 6535 DAPAESVAYHAQNNPPVPPKPQPK 24 2 0 Unmodified _DAPAESVAYHAQNNPPVPPKPQPK_ 0 0 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 857.1121 3 851.434588 2551.28194 65978.2 0.61581 0.00052433 0.09092 7.7412E-05 0.70673 0.00060174 851.768738988266 857.111692538481 57.988 1.2403 57.988 57.485 58.725 0 412 92 8 0 0 0 0.021038 2 28641 20.199 20.199 1 1.6661 1.4301 0 3860900 1277200 2583700 4162 878 1550 1594 6536;6537 6537 DAPPLLPSDTGQGYR 15 0 1 Unmodified _DAPPLLPSDTGQGYR_ 0 0 0 B4DQG8;Q9NPF5;Q5TG40;B4DTH3;B4DEF2;B4DTU6;Q5TG38;Q5TG37 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.894 2 793.894094 1585.77364 69414.26 0.81548 0.00064741 -0.38074 -0.00030227 0.43475 0.00034514 794.394942831876 798.898241921818 80.943 0.6715 80.943 80.623 81.294 0 209 56 7 0 0 0 0.023716 1 48172 29.805 23.272 1 0.78294 0.79125 0 17808000 8873100 8934600 4163 1024 1551 1595 6538 6538 DAPPLLPSDTGQGYR 15 0 1 Unmodified _DAPPLLPSDTGQGYR_ 0 0 0 B4DQG8;Q9NPF5;Q5TG40;B4DTH3;B4DEF2;B4DTU6;Q5TG38;Q5TG37 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.894 2 793.894094 1585.77364 68649.63 0.85761 0.00068085 -0.43668 -0.00034668 0.42093 0.00033418 794.394849410302 798.897887415804 80.134 1.03 80.134 79.773 80.803 0 214 82 5 0 0 0 0.020945 1 48618 30.872 24.183 1 0.67579 0.67749 0 17992000 10327000 7664200 4164 1024 1551 1595 6539 6539 DAPPLLPSDTGQGYR 15 0 1 Unmodified _DAPPLLPSDTGQGYR_ 0 0 0 B4DQG8;Q9NPF5;Q5TG40;B4DTH3;B4DEF2;B4DTU6;Q5TG38;Q5TG37 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 798.897 2 793.894094 1585.77364 NaN NaN NaN 0.31117 0.00024703 NaN NaN NaN NaN 92.329 0.88235 92.329 91.766 92.649 0 0 0 0 0.046749 1 51216 37.426 22.453 1 NaN NaN 0 3839500 0 3839500 4165 1024 1551 1595 6540 6540 DAPQDFHPDR 10 0 1 Unmodified _DAPQDFHPDR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.268 2 599.267801 1196.52105 78049.93 0.51016 0.00030572 0.38027 0.00022788 0.89043 0.0005336 599.267821319244 604.272023171983 23.566 0.43975 23.566 23.373 23.813 0 80 20 5 0 0 0 0.002984 2 9360 66.595 62.661 1 1.3975 1.5098 0 48672000 21295000 27377000 4166 1504 1552 1596 6541;6542 6542 DAPQDFHPDR 10 0 1 Unmodified _DAPQDFHPDR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.2686 2 599.267801 1196.52105 80743.02 0.36941 0.00022138 0.5035 0.00030173 0.87291 0.00052311 599.267894652442 604.272134933664 23.278 0.45279 23.278 23.061 23.514 0 81 20 6 0 0 0 0.0067494 2 9118 58.37 51.92 1 1.7085 1.9241 0 46481000 18084000 28397000 4167 1504 1552 1596 6543;6544 6543 DAPQDFHPDR 10 0 1 Unmodified _DAPQDFHPDR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 604.2724 2 599.267801 1196.52105 78719.47 0.34085 0.00020426 0.75364 0.00045163 1.0945 0.00065589 599.268312677546 604.272213961851 25.825 0.41769 25.825 25.578 25.995 1.9073E-06 64 16 6 0 0 0 0.0051694 1 9516 60.518 56.584 1 3.2253 2.6946 0 3342300 677010 2665300 4168 1504 1552 1596 6545 6545 DAPSLEEVEGHVADGSATEMGTTK 24 1 0 Oxidation (M) _DAPSLEEVEGHVADGSATEM(ox)GTTK_ DAPSLEEVEGHVADGSATEM(1)GTTK DAPSLEEVEGHVADGSATEM(138.93)GTTK 0 1 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.7021 3 816.367469 2446.08058 66700.19 0.7337 0.00059897 -0.3169 -0.0002587 0.4168 0.00034027 816.701719416773 819.373058644436 73.228 0.73466 73.228 72.877 73.611 0 532 62 11 0 0 0 1.4297E-45 2 44049 138.93 136.46 1 1.0616 1.2215 0 176220000 89442000 86776000 4169 740 1553 1597 6546;6547 6547 574 DAPSLEEVEGHVADGSATEMGTTK 24 1 0 Oxidation (M) _DAPSLEEVEGHVADGSATEM(ox)GTTK_ DAPSLEEVEGHVADGSATEM(1)GTTK DAPSLEEVEGHVADGSATEM(66.85)GTTK 0 1 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.3734 3 816.367469 2446.08058 66240.23 0.62321 0.00050877 -0.24529 -0.00020025 0.37792 0.00030852 816.701815439698 819.37309011915 85.062 0.76137 85.062 84.721 85.483 0 399 52 12 0 0 0 3.7529E-12 1 46381 66.853 66.853 1 1.2274 1.0055 0 35862000 16116000 19747000 4170 740 1553 1597 6548 6548 574 DAPSLEEVEGHVADGSATEMGTTK 24 1 0 Oxidation (M) _DAPSLEEVEGHVADGSATEM(ox)GTTK_ DAPSLEEVEGHVADGSATEM(1)GTTK DAPSLEEVEGHVADGSATEM(46.4)GTTK 0 1 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 819.3732 3 816.367469 2446.08058 67181.11 0.50613 0.00041319 0.022345 1.8242E-05 0.52848 0.00043143 816.701623619973 819.373407194279 96.901 0.55087 96.901 96.679 97.23 0 132 25 8 0 0 0 1.9886E-06 1 53607 46.403 46.403 1 2.2892 1.8639 0 4569800 1275500 3294400 4171 740 1553 1597 6549 6549 574 DAPSLEEVEGHVADGSATEMGTTK 24 1 0 Unmodified _DAPSLEEVEGHVADGSATEMGTTK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 814.3799 3 811.035831 2430.08566 66155 0.90219 0.0007317 -0.090128 -7.3097E-05 0.81206 0.00065861 811.370272744378 814.041516868292 96.929 0.51898 96.929 96.707 97.226 0 202 26 10 0 0 0 6.5734E-06 2 54382 40.986 40.986 1 1.9663 1.5309 0 15608000 5083000 10525000 4172 740 1553 1598 6550;6551 6550 DAPSLEEVEGHVADGSATEMGTTK 24 1 0 Unmodified _DAPSLEEVEGHVADGSATEMGTTK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 814.0416 3 811.035831 2430.08566 66283.25 0.44094 0.00035761 0.30817 0.00024994 0.74911 0.00060755 811.370552046588 814.041725099472 96.888 0.60881 96.888 96.638 97.247 0 188 28 9 0 0 0 4.5425E-16 2 53599 89.979 89.979 1 1.9843 1.5979 0 13765000 4682500 9082200 4173 740 1553 1598 6552;6553 6552 DAQDAEAAMDGAELDGR 17 0 1 Oxidation (M) _DAQDAEAAM(ox)DGAELDGR_ DAQDAEAAM(1)DGAELDGR DAQDAEAAM(72.89)DGAELDGR 0 1 0 A0A024R3A8;Q9BRL6 A0A024R3A8 A0A024R3A8 SRP46;SRSF8 Serine/arginine-rich splicing factor 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 875.8677 2 875.862862 1749.71117 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.007 1 40.007 39.507 40.507 0 0 0 0 0.00013999 1 21291 72.891 66.45 1 4174 133 1554 1599 6554 6554 113 DAQDVQASQAEADQQQTR 18 0 1 Unmodified _DAQDVQASQAEADQQQTR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 999.9529 2 994.948846 1987.88314 61866.28 0.33258 0.0003309 -0.15385 -0.00015307 0.17874 0.00017783 994.948696045871 1000.4544803233 22.662 0.36763 22.662 22.478 22.845 0 109 22 7 0 0 0 9.2649E-08 2 8659 90.444 87.67 1 0.96848 0.98429 0 7421300 3681900 3739500 4175 471 1555 1600 6555;6556 6556 DAQDVQASQAEADQQQTR 18 0 1 Unmodified _DAQDVQASQAEADQQQTR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 994.9494 2 994.948846 1987.88314 61045.95 0.57964 0.00057671 -0.22361 -0.00022248 0.35602 0.00035422 995.449524983735 999.953134068225 22.49 0.3642 22.49 22.285 22.649 0 68 15 6 0 0 0 1.0207E-07 2 8410 89.466 70.732 1 0.91684 0.91094 0 8631200 4877800 3753400 4176 471 1555 1600 6557;6558 6558 DAQDVQASQAEADQQQTR 18 0 1 Unmodified _DAQDVQASQAEADQQQTR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 995.4501 2 994.948846 1987.88314 61235.27 0.027386 2.7247E-05 -0.037253 -3.7065E-05 -0.0098673 -9.8175E-06 994.949018507153 999.952538063361 25.934 0.37628 25.934 25.737 26.114 -1.9073E-06 83 15 8 0 0 0 0.0010367 1 9603 37.77 32.491 1 0.6906 0.58632 0 5191500 2997300 2194200 4177 471 1555 1600 6559 6559 DAQEFGADVR 10 0 1 Unmodified _DAQEFGADVR_ 0 0 0 O60885;A0A024R7H8;Q6PIS5;Q6NXE4;Q05BM2;Q5BJ26;M0QZD9 O60885 O60885 BRD4 Bromodomain-containing protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.2567 2 554.256902 1106.49925 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.348 1 41.348 40.848 41.848 0 0 0 0 3.6338E-05 1 22207 90.15 61.001 1 4178 1399 1556 1601 6560 6560 DAQPSFSAEDIAK 13 1 0 Unmodified _DAQPSFSAEDIAK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8272 2 689.827889 1377.64122 73486.69 0.61309 0.00042293 0.091937 6.3421E-05 0.70503 0.00048635 689.827719255588 693.835062655017 69.337 0.63885 69.337 69.007 69.646 0 242 53 6 0 0 0 0.0015349 2 40353 72.2 65.312 1 1.2257 1.3262 0 35948000 17149000 18799000 4179 568 1557 1602 6561;6562 6562 DAQPSFSAEDIAK 13 1 0 Unmodified _DAQPSFSAEDIAK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8281 2 689.827889 1377.64122 73914.2 0.71214 0.00049126 -0.19173 -0.00013226 0.52041 0.000359 689.827679299485 693.835067023301 68.295 0.54639 68.295 67.991 68.537 0 183 42 6 0 0 0 0.0010013 2 40472 72.652 63.464 1 1.3237 1.4606 0 44001000 19506000 24495000 4180 568 1557 1602 6563;6564 6564 DAQQDLNLDIEK 12 1 0 Unmodified _DAQQDLNLDIEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 701.3472 2 701.346446 1400.67834 74078.58 0.54701 0.00038364 0.40338 0.00028291 0.95039 0.00066655 701.346822150683 705.353864606759 86.469 0.62881 86.469 86.155 86.784 0 136 37 5 0 0 0 0.016404 1 46588 42.21 38.447 1 1.7954 1.4443 0 2501800 960460 1541300 4181 1581 1558 1603 6565 6565 DAQTQLVGLHAK 12 1 0 Unmodified _DAQTQLVGLHAK_ 0 0 0 A8K8N3;Q96R06;A4FUA2 A8K8N3 A8K8N3 SPAG5 Sperm-associated antigen 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.8604 2 640.851501 1279.68845 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.272 1 42.272 41.772 42.772 0 0 0 0 0.01773 1 22769 52.705 38.936 1 4182 779 1559 1604 6566 6566 DASGQPIFNASAK 13 1 0 Unmodified _DASGQPIFNASAK_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829;A2I832 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.8342 2 653.325316 1304.63608 74162.91 0.66204 0.00043253 -0.028502 -1.8621E-05 0.63354 0.0004139 653.324983894683 657.332445899955 50.572 0.45143 50.572 50.32 50.771 0 171 43 6 0 0 0 1.8864E-13 2 27853 129.89 118.25 1 0.74266 0.81365 0 52464000 28241000 24223000 4183 655 1560 1605 6567;6568 6567 DASGQPIFNASAK 13 1 0 Unmodified _DASGQPIFNASAK_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829;A2I832 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.326 2 653.325316 1304.63608 NaN NaN NaN -0.012564 -8.2083E-06 NaN NaN NaN NaN 57.557 0.49679 57.557 57.301 57.797 0 0 0 0 0.0025716 1 29107 68.786 62.92 1 NaN NaN 0 1955900 1955900 0 4184 655 1560 1605 6569 6569 DASLMVTNDGATILK 15 1 0 Oxidation (M) _DASLM(ox)VTNDGATILK_ DASLM(1)VTNDGATILK DASLM(93.35)VTNDGATILK 0 1 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.906 2 782.897988 1563.78142 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.451 1 87.451 86.951 87.951 0 0 0 0 1.8932E-05 1 52774 93.345 70.704 1 4185 1255 1561 1606 6570 6570 959 DASLVTNEDHQR 12 0 1 Unmodified _DASLVTNEDHQR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.8303 2 692.826212 1383.63787 72670.95 0.74278 0.00051461 -0.01474 -1.0212E-05 0.72803 0.0005044 692.826248646828 697.829989590608 22.292 0.45204 22.292 22.074 22.526 0 99 26 6 0 0 0 3.6698E-29 2 8400 164.97 164.97 1 1.0665 1.0722 0 17323000 8413600 8909300 4186 1581 1562 1607 6571;6572 6572 DASLVTNEDHQR 12 0 1 Unmodified _DASLVTNEDHQR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.8265 2 692.826212 1383.63787 72278.29 0.59578 0.00041277 -0.037894 -2.6254E-05 0.55788 0.00038652 692.826183331462 697.83014036348 22.097 0.37353 22.097 21.972 22.346 0 68 17 7 0 0 0 1.4585E-37 2 8132 177.06 177.06 1 1.1384 1.2572 0 41710000 18502000 23208000 4187 1581 1562 1607 6573;6574 6574 DASSSTFPTLTR 12 0 1 Unmodified _DASSSTFPTLTR_ 0 0 0 A0A024R2G2;Q9BXW9;H7BZJ7 A0A024R2G2 A0A024R2G2 FANCD2 Fanconi anemia group D2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.8228 2 641.817324 1281.62009 76942.16 0.85788 0.0005506 -0.05776 -3.7071E-05 0.80012 0.00051353 641.817401745799 646.821039345101 71.932 0.41426 71.932 71.766 72.18 0 87 32 4 0 0 0 0.005381 1 42037 51.092 44.501 1 0.94366 0.9445 0 8971700 5532500 3439100 4188 111 1563 1608 6575 6575 DASSTYSQVENLNR 14 0 1 Unmodified _DASSTYSQVENLNR_ 0 0 0 A0A140VJD0;Q9UFC0;H7C5S6;Q59FT0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.3686 2 792.368441 1582.72233 68351.63 0.66951 0.0005305 -0.26531 -0.00021022 0.4042 0.00032028 792.368313611531 797.372097869937 66.975 0.51955 66.975 66.71 67.23 0 177 34 7 0 0 0 0.0043171 1 34817 45.661 45.256 1 1.1347 0.96124 0 5027900 2354800 2673200 4189 599 1564 1609 6576 6576 DASSTYSQVENLNR 14 0 1 Unmodified _DASSTYSQVENLNR_ 0 0 0 A0A140VJD0;Q9UFC0;H7C5S6;Q59FT0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.3683 2 792.368441 1582.72233 68073.45 0.56373 0.00044668 -0.80631 -0.0006389 -0.24258 -0.00019221 792.368074057098 797.371374502056 67.813 0.80137 67.813 67.485 68.286 0 239 58 7 0 0 0 0.0037659 2 34472 46.592 40.209 1 1.3458 1.1639 0 4354500 1889400 2465100 4190 599 1564 1609 6577;6578 6578 DATNVAAAFEEAVR 14 0 1 Unmodified _DATNVAAAFEEAVR_ 0 0 0 A0A024RBV5;P51151 A0A024RBV5 A0A024RBV5 RAB9A Ras-related protein Rab-9A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.3666 2 732.359887 1462.70522 73661.07 0.84395 0.00061807 0.6923 0.00050701 1.5362 0.0011251 732.359855090242 737.364743939693 109.04 0.56864 109.04 108.78 109.35 0 100 35 4 0 0 0 2.2623E-06 1 68136 106.01 98.409 1 2.5423 2.6134 0 14237000 4860200 9376800 4191 348 1565 1610 6579 6579 DATNVAAAFEEAVR 14 0 1 Unmodified _DATNVAAAFEEAVR_ 0 0 0 A0A024RBV5;P51151 A0A024RBV5 A0A024RBV5 RAB9A Ras-related protein Rab-9A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.3663 2 732.359887 1462.70522 76505.77 0.67616 0.00049519 0.74574 0.00054615 1.4219 0.0010413 732.35976023502 737.364912340149 108.61 0.49254 108.61 108.32 108.81 7.6294E-06 124 32 6 0 0 0 1.7963E-09 1 69440 118.77 118.77 1 2.6101 2.6336 0 10371000 3418500 6952100 4192 348 1565 1610 6580 6580 DATNVAAAFEEAVR 14 0 1 Unmodified _DATNVAAAFEEAVR_ 0 0 0 A0A024RBV5;P51151 A0A024RBV5 A0A024RBV5 RAB9A Ras-related protein Rab-9A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.3638 2 732.359887 1462.70522 71980.83 0.87729 0.00064249 0.056094 4.1081E-05 0.93338 0.00068357 732.36004653828 737.364001781294 120.33 0.4082 120.33 120.1 120.51 -7.6294E-06 82 22 6 0 0 0 0.0030419 2 70483 47.815 45.136 1 1.2495 1.0596 0 3007500 1367000 1640400 4193 348 1565 1610 6581;6582 6581 DATSRPTDNILIPQLIR 17 0 2 Unmodified _DATSRPTDNILIPQLIR_ 0 0 1 B3KNE7;B3KQF0;A0A0S2Z5M1;Q9UGP8 B3KNE7 B3KNE7 SEC63 Translocation protein SEC63 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.6932 3 641.693451 1922.05852 NaN NaN NaN 0.45142 0.00028967 NaN NaN NaN NaN 110.26 0.35679 110.26 110.04 110.4 -7.6294E-06 0 0 0 0.01921 1 69126 32.091 27.849 1 NaN NaN 0 6181300 6181300 0 4194 584 1566 1611 6583 6583 DATSRPTDNILIPQLIR 17 0 2 Unmodified _DATSRPTDNILIPQLIR_ 0 0 1 B3KNE7;B3KQF0;A0A0S2Z5M1;Q9UGP8 B3KNE7 B3KNE7 SEC63 Translocation protein SEC63 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.2964 3 641.693451 1922.05852 78436.68 0.67108 0.00043063 0.60742 0.00038978 1.2785 0.00082041 642.028057317197 648.366088560881 109.55 0.34626 109.55 109.37 109.72 0 88 23 5 0 0 0 0.041752 1 70419 27.714 27.714 1 0.5775 0.58022 0 9551200 5017200 4534000 4195 584 1566 1611 6584 6584 DAVITVPVFFNQAER 15 0 1 Unmodified _DAVITVPVFFNQAER_ 0 0 0 B7Z766;A0A087X054;B7Z2N4;B3KXH0;Q9Y4L1;E9PJ21;Q05D91;A0A087WWI4;Q6IN67;K7EQK2;J3KTF1;A0A024R3G0;J3QL06 B7Z766 B7Z766 HYOU1 Hypoxia up-regulated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.4482 2 853.449037 1704.88352 68333.27 0.72403 0.00061792 0.71708 0.00061199 1.4411 0.0012299 853.449182436445 858.955467639036 122.6 0.32213 122.6 122.44 122.76 7.6294E-06 85 23 5 0 0 0 0.004564 1 79422 38.875 38.875 1 1.5897 1.5856 0 8705100 3668400 5036600 4196 443 1567 1612 6585 6585 DAVITVPVFFNQAER 15 0 1 Unmodified _DAVITVPVFFNQAER_ 0 0 0 B7Z766;A0A087X054;B7Z2N4;B3KXH0;Q9Y4L1;E9PJ21;Q05D91;A0A087WWI4;Q6IN67;K7EQK2;J3KTF1;A0A024R3G0;J3QL06 B7Z766 B7Z766 HYOU1 Hypoxia up-regulated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 853.449 2 853.449037 1704.88352 67881.7 0.89257 0.00076176 0.21322 0.00018197 1.1058 0.00094373 853.448544247477 858.454062763299 122.19 0.35293 122.19 121.98 122.33 0 96 25 5 0 0 0 0.0017999 1 80959 46.73 46.73 1 1.0841 1.0791 0 8029500 4742200 3287300 4197 443 1567 1612 6586 6586 DAVLLLFANK 10 1 0 Unmodified _DAVLLLFANK_ 0 0 0 P18085;C9JPM4;C9JAK5;U3KQF2 P18085 P18085 ARF4 ADP-ribosylation factor 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.3358 2 552.326599 1102.63865 83009.22 0.73624 0.00040665 -0.09037 -4.9914E-05 0.64587 0.00035673 552.326376978111 556.33349713456 116.78 0.69868 116.78 116.51 117.21 0 167 49 5 0 0 0 9.5484E-06 3 74464 105.57 90.792 1 2.6702 2.8333 0 15767000 4319800 11447000 4198 1498 1568 1613 6587;6588;6589 6587 DAVLLLFANK 10 1 0 Unmodified _DAVLLLFANK_ 0 0 0 P18085;C9JPM4;C9JAK5;U3KQF2 P18085 P18085 ARF4 ADP-ribosylation factor 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.3265 2 552.326599 1102.63865 82871.63 0.70675 0.00039036 0.0035322 1.9509E-06 0.71028 0.00039231 552.326460006349 556.333537003344 116.28 0.71278 116.28 115.91 116.63 -7.6294E-06 172 45 6 0 0 0 9.5484E-06 1 75893 105.57 86.877 1 2.4147 2.5134 0 24532000 8739200 15793000 4199 1498 1568 1613 6590 6590 DAVLLVFANK 10 1 0 Unmodified _DAVLLVFANK_ 0 0 0 C9J1Z8;A4D0Z3;B4DLJ3;P84085;B4DEB9;A0A024R3Q3;A0A024R0Y6;F5H423;P84077;P61204;B4E190 C9J1Z8;A0A024R3Q3 A0A024R3Q3 ARF5;ARF1;ARF3 ADP-ribosylation factor 5;ADP-ribosylation factor 1;ADP-ribosylation factor 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.3264 2 545.318774 1088.623 NaN NaN NaN -0.54282 -0.00029601 NaN NaN NaN NaN 108.37 0.67965 108.37 107.95 108.63 0 0 0 0 0.00025215 1 67498 92.439 59.599 1 NaN NaN 0 16331000 0 16331000 4200 660;62 1569 1614 6591 6591 DAVLLVFANK 10 1 0 Unmodified _DAVLLVFANK_ 0 0 0 C9J1Z8;A4D0Z3;B4DLJ3;P84085;B4DEB9;A0A024R3Q3;A0A024R0Y6;F5H423;P84077;P61204;B4E190 C9J1Z8;A0A024R3Q3 A0A024R3Q3 ARF5;ARF1;ARF3 ADP-ribosylation factor 5;ADP-ribosylation factor 1;ADP-ribosylation factor 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.3185 2 545.318774 1088.623 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.29 1 108.29 107.79 108.79 7.6294E-06 0 0 0 7.7112E-05 1 67600 82.452 47.008 1 4201 660;62 1569 1614 6592 6592 DAVLLVFANK 10 1 0 Unmodified _DAVLLVFANK_ 0 0 0 C9J1Z8;A4D0Z3;B4DLJ3;P84085;B4DEB9;A0A024R3Q3;A0A024R0Y6;F5H423;P84077;P61204;B4E190 C9J1Z8;A0A024R3Q3 A0A024R3Q3 ARF5;ARF1;ARF3 ADP-ribosylation factor 5;ADP-ribosylation factor 1;ADP-ribosylation factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.3263 2 545.318774 1088.623 86392.27 0.63062 0.00034389 -0.085321 -4.6527E-05 0.5453 0.00029736 545.31900747569 549.325724319139 107.62 0.87428 107.62 107.35 108.23 -7.6294E-06 165 62 5 0 0 0 0.00024981 2 68598 92.439 60.505 1 5.1396 5.2955 0 9603100 1732400 7870700 4202 660;62 1569 1614 6593;6594 6593 DAVSGLAFR 9 0 1 Unmodified _DAVSGLAFR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.2508 2 468.250892 934.48723 88310.61 0.11128 5.2106E-05 0.19844 9.2918E-05 0.30971 0.00014502 468.251142399492 473.254708882128 72.29 0.77563 72.29 71.848 72.624 0 276 57 8 0 0 0 0.00054206 2 42385 97.798 58.615 1 0.8496 0.95117 0 89302000 47466000 41836000 4203 1389 1570 1615 6595;6596 6596 DAVSGLAFR 9 0 1 Unmodified _DAVSGLAFR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.2507 2 468.250892 934.48723 86755.66 0.11587 5.4255E-05 0.051162 2.3956E-05 0.16703 7.8212E-05 468.250812360559 473.25485346285 71.144 0.62728 71.144 70.725 71.352 0 245 46 9 0 0 0 1.5614E-05 1 42571 121.99 78.775 1 0.82197 0.94837 0 237880000 132780000 105110000 4204 1389 1570 1615 6597 6597 DAVSGLAFR 9 0 1 Unmodified _DAVSGLAFR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.2506 2 468.250892 934.48723 88983.79 0.1863 8.7236E-05 0.1582 7.4079E-05 0.3445 0.00016131 468.250906427969 473.254922032174 82.179 0.86342 82.179 81.753 82.617 0 271 50 8 0 0 0 0.020912 1 43686 49.833 25.861 1 0.94658 0.78832 0 15733000 7876500 7856300 4205 1389 1570 1615 6598 6598 DAVSNTTNQLESK 13 1 0 Unmodified _DAVSNTTNQLESK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 703.8423 2 703.841527 1405.6685 72468.3 0.65342 0.0004599 0.32019 0.00022537 0.97361 0.00068527 703.841695212667 707.849046684659 43.979 0.68884 43.979 43.71 44.399 3.8147E-06 195 46 6 0 0 0 0.00024875 2 20785 68.132 68.132 1 0.45168 0.35127 0 3390500 2368900 1021600 4206 197 1571 1616 6599;6600 6599 DAVSNTTNQLESK 13 1 0 Unmodified _DAVSNTTNQLESK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.8425 2 703.841527 1405.6685 72845.82 0.66053 0.00046491 -0.016031 -1.1283E-05 0.6445 0.00045363 703.841651573921 707.848970156275 44.376 0.54493 44.376 44.089 44.634 3.8147E-06 170 35 7 0 0 0 5.9345E-06 2 20494 105.2 93.982 1 0.51895 0.4041 0 3518200 2297100 1221100 4207 197 1571 1616 6601;6602 6601 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.775 2 567.774928 1133.5353 81668.63 0.081602 4.6332E-05 -0.054778 -3.1102E-05 0.026824 1.523E-05 567.774884237036 571.782109812418 15.066 0.25787 15.066 14.924 15.182 0 20 6 6 0 0 0 1.3272E-06 1 2875 111.74 111.74 1 0.64048 0.6893 0 33223000 20807000 12417000 4208 828 1572 1617 6603 6603 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.7762 2 567.774928 1133.5353 80959.03 0.24637 0.00013988 0.67448 0.00038295 0.92085 0.00052283 567.775421535035 571.782058132561 18.524 0.2933 18.524 18.417 18.711 0 31 11 6 0 0 0 1.2044E-09 3 5496 132.84 132.84 1 1.0809 1.1802 0 50683000 27261000 23422000 4209 828 1572 1617 6604;6605;6606 6605 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 378.8529 3 378.852377 1133.5353 96572.73 0.0049981 1.8936E-06 0.17973 6.8092E-05 0.18473 6.9985E-05 378.852342847914 381.523825392136 19.427 0.80099 19.427 19.2 20.001 0 240 46 7 0 0 0 0.00029767 1 6039 67.726 61.883 1 0.68283 0.75523 0 57600000 36314000 21286000 4210 828 1572 1617 6607 6607 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.7817 2 567.774928 1133.5353 79582.64 0.61938 0.00035167 0.040799 2.3164E-05 0.66018 0.00037483 567.774998782305 571.782012685331 23.05 1.7085 23.05 22.396 24.104 0 420 90 8 0 0 0 2.4826E-06 3 9163 110.87 99.802 1 0.70568 0.83302 0 364240000 222900000 141350000 4211 828 1572 1617 6608;6609;6610 6610 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 378.8522 3 378.852377 1133.5353 99673.45 0.10297 3.9011E-05 -0.12101 -4.5846E-05 -0.018042 -6.8351E-06 378.852341478561 381.52371627137 23.04 0.339 23.04 22.845 23.184 0 49 17 4 0 0 0 0.039008 1 8921 20.788 20.788 1 0.70098 0.69238 0 8424900 4626800 3798200 4212 828 1572 1617 6611 6611 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.7823 2 567.774928 1133.5353 80614.31 0.52941 0.00030059 -0.31757 -0.00018031 0.21185 0.00012028 567.774919433667 571.781656937718 27.508 0.4012 27.508 27.256 27.657 0 58 24 4 0 0 0 0.0026273 1 12612 68.224 65.245 1 0.89042 0.88599 0 8010900 4563000 3447800 4213 828 1572 1617 6612 6612 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.7778 2 567.774928 1133.5353 NaN NaN NaN 0.059077 3.3542E-05 NaN NaN NaN NaN 19.443 2.7113 19.443 19.182 21.893 0 0 0 0 9.601E-30 4 6035 159.58 124.84 1 NaN NaN 0 8069500000 8069500000 0 4214 828 1572 1617 6613;6614;6615;6616 6613 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.7817 2 567.774928 1133.5353 NaN NaN NaN -0.046903 -2.663E-05 NaN NaN NaN NaN 24.292 1.0562 24.292 24.014 25.07 0 0 0 0 0.00089136 2 10557 88.948 71.717 1 NaN NaN 0 9248300 0 9248300 4215 828 1572 1617 6617;6618 6618 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.7745 2 567.774928 1133.5353 NaN NaN NaN -0.33805 -0.00019194 NaN NaN NaN NaN 45.379 0.37001 45.379 45.069 45.439 0 0 0 0 0.042278 1 24323 48.794 40.262 1 NaN NaN 0 4875800 4875800 0 4216 828 1572 1617 6619 6619 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.775 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.167 1 24.167 23.667 24.667 0 0 0 0 6.1452E-05 1 9945 84.615 65.52 1 4217 828 1572 1617 6620 6620 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.775 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.01 1 25.01 24.51 25.51 1.9073E-06 0 0 0 0.0003962 1 10671 74.269 52.032 1 4218 828 1572 1617 6621 6621 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.7748 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.781 1 25.781 25.281 26.281 0 0 0 0 0.0014294 1 11327 68.846 51.461 1 4219 828 1572 1617 6622 6622 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.7757 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.657 1 32.657 32.157 33.157 0 0 0 0 0.0061583 1 16232 62.582 45.806 1 4220 828 1572 1617 6623 6623 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.7747 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.358 1 48.358 47.858 48.858 -3.8147E-06 0 0 0 0.039494 1 26344 47.198 36.73 1 4221 828 1572 1617 6624 6624 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.7918 2 567.774928 1133.5353 79836.45 0.42621 0.00024199 -0.46108 -0.00026179 -0.034876 -1.9801E-05 567.774491776468 571.781687297317 22.115 0.64448 22.115 21.784 22.428 0 159 38 6 0 0 0 0.052961 1 8223 84.213 73.503 1 0.58866 0.63579 0 42286000 26668000 15618000 4222 828 1572 1617 6625 6625 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.7746 2 567.774928 1133.5353 80885.77 0.48204 0.00027369 -0.6823 -0.00038739 -0.20026 -0.0001137 567.774292710146 571.781721778565 21.631 0.91489 21.631 20.864 21.779 0 109 45 5 0 0 0 8.4089E-06 3 7774 106.42 97.029 1 0.64238 0.66023 0 11682000 6161300 5520300 4223 828 1572 1617 6626;6627;6628 6628 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.7755 2 567.774928 1133.5353 80395.55 0.53788 0.00030539 -0.0036345 -2.0636E-06 0.53424 0.00030333 567.774746639795 571.782240296309 24.431 0.63597 24.431 24.156 24.792 0 88 29 4 0 0 0 0.0038105 2 10058 62.823 62.823 1 0.6912 0.71841 0 9925800 6219600 3706100 4224 828 1572 1617 6629;6630 6630 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.782 2 567.774928 1133.5353 NaN NaN NaN -2.391 -0.0013575 NaN NaN NaN NaN 19.266 1.1705 19.266 19.11 20.28 0 0 0 0 1.9609E-22 1 5681 154.75 121.49 1 NaN NaN 0 1973600000 0 1973600000 4225 828 1572 1617 6631 6631 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.7751 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 0.95929 1 0.95929 0.45929 1.4593 0 0 0 0 0.0041025 1 174 65.305 47.92 1 4226 828 1572 1617 6632 6632 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.775 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.291 1 23.291 22.791 23.791 0 0 0 0 5.4552E-05 1 9179 86.136 61.192 1 4227 828 1572 1617 6633 6633 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.7755 2 567.774928 1133.5353 79752.7 0.035526 2.0171E-05 0.40161 0.00022803 0.43714 0.0002482 567.774920978173 571.782363293512 19.903 0.43082 19.903 19.739 20.17 0 110 23 8 0 0 0 0.011781 1 5423 51.528 51.528 1 0.87262 0.69095 0 4950800 2733000 2217800 4228 828 1572 1617 6634 6634 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 379.1876 3 378.852377 1133.5353 97032.81 -0.27689 -0.0001049 0.090885 3.4432E-05 -0.18601 -7.0469E-05 378.852389113321 381.523770858936 20.776 0.85325 20.776 20.442 21.296 0 257 60 6 0 0 0 0.024597 2 5969 26.012 21.671 1 0.74373 0.59045 0 6497000 3409700 3087300 4229 828 1572 1617 6635;6636 6636 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.7814 2 567.774928 1133.5353 79919.94 0.37267 0.00021159 -0.030746 -1.7457E-05 0.34192 0.00019413 567.775085393738 571.781793640626 29.426 1.93 29.426 28.729 30.659 1.9073E-06 358 141 6 0 0 0 0.017443 1 11951 47.853 44.714 1 0.83592 0.68 0 2686600 1504800 1181800 4230 828 1572 1617 6637 6637 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.775 2 567.774928 1133.5353 NaN NaN NaN 0.54039 0.00030682 NaN NaN NaN NaN 20.654 4.3589 20.654 20.373 24.732 0 0 0 0 1.2373E-29 6 6456 156.92 115.34 1 NaN NaN 0 1791600000 1791600000 0 4231 828 1572 1617 6638;6639;6640;6641;6642;6643 6639 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.7751 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.28 1 25.28 24.78 25.78 1.9073E-06 0 0 0 0.0059765 1 9172 62.823 39.394 1 4232 828 1572 1617 6644 6644 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.7751 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.065 1 26.065 25.565 26.565 0 0 0 0 0.0040279 1 9736 65.404 48.018 1 4233 828 1572 1617 6645 6645 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.7756 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.779 1 27.779 27.279 28.279 0 0 0 0 0.017738 1 10927 54.722 37.337 1 4234 828 1572 1617 6646 6646 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.7748 2 567.774928 1133.5353 78837.77 0.039559 2.2461E-05 -0.14493 -8.2287E-05 -0.10537 -5.9826E-05 567.774936255018 571.781907577256 20.781 1.3336 20.781 20.558 21.891 0 256 61 10 0 0 0 3.7597E-08 3 5535 118.33 118.33 1 0.74552 0.63382 0 77475000 43899000 33576000 4235 828 1572 1617 6647;6648;6649 6648 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.7752 2 567.774928 1133.5353 79745.48 0.52499 0.00029808 -0.145 -8.2326E-05 0.38 0.00021575 567.774809487502 571.78187861186 25.617 1.0337 25.617 25.227 26.26 -1.9073E-06 190 45 9 0 0 0 9.2121E-10 1 8869 134.05 119.11 1 0.78344 0.62725 0 20780000 11477000 9302400 4236 828 1572 1617 6650 6650 DAVTYTEHAKR 11 1 1 Unmodified _DAVTYTEHAKR_ 0 0 1 B2R4R0;P62805 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.887 3 430.886081 1289.63641 90810.11 0.28787 0.00012404 0.17958 7.7377E-05 0.46745 0.00020142 430.886078172977 436.893519901484 16.879 0.47184 16.879 16.777 17.248 0 65 15 7 0 0 0 0.00035848 1 3927 57.836 51.803 1 0.68138 0.77938 0 22002000 11969000 10032000 4237 828 1573 1618 6651 6651 DAVTYTEHAKR 11 1 1 Unmodified _DAVTYTEHAKR_ 0 0 1 B2R4R0;P62805 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3032 2 645.825483 1289.63641 76673.29 0.94663 0.00061136 0.046868 3.0268E-05 0.99349 0.00064162 645.825447488404 654.836778751734 16.873 0.23657 16.873 16.8 17.037 0 30 8 5 0 0 0 0.0053235 1 3929 89.047 70.375 1 0.86919 0.96296 0 8581400 4614200 3967300 4238 828 1573 1618 6652 6652 DAVVGRPSMDK 11 1 1 Oxidation (M) _DAVVGRPSM(ox)DK_ DAVVGRPSM(1)DK DAVVGRPSM(54.61)DK 0 1 1 F5H6I7;B4DXC4;Q6DD88 F5H6I7 F5H6I7 ATL3 Atlastin-3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.8059 2 595.795337 1189.57612 NaN NaN NaN NaN NaN NaN NaN NaN NaN 17.054 1 17.054 16.554 17.554 0 0 0 0 0.026964 1 4258 54.608 26.209 1 4239 1047 1574 1619 6653 6653 822 DAVVYPILVEFTR 13 0 1 Unmodified _DAVVYPILVEFTR_ 0 0 0 B7Z766;A0A087X054;B7Z2N4;B3KXH0;Q9Y4L1;E9PJ21;Q05D91;A0A087WWI4;Q6IN67;K7EQK2 B7Z766 B7Z766 HYOU1 Hypoxia up-regulated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.9259 2 761.419217 1520.82388 NaN NaN NaN 0.23713 0.00018056 NaN NaN NaN NaN 131.69 0.38974 131.69 131.51 131.9 0 0 0 0 0.0044591 2 86029 61.353 46.088 1 NaN NaN 0 3556300 0 3556300 4240 443 1575 1620 6654;6655 6655 DCDLQEDACYNCGR 14 0 1 Unmodified _DCDLQEDACYNCGR_ 0 0 0 A0A0S2Z4Q3;A0A0S2Z4K2;P62633 A0A0S2Z4Q3 A0A0S2Z4Q3 CNBP Cellular nucleic acid-binding protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.3295 2 888.324535 1774.63452 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.383 1 40.383 39.883 40.883 0 0 0 0 0.001122 1 21119 76.143 70.297 1 4241 565 1576 1621 6656 6656 DCDLQEDACYNCGR 14 0 1 Unmodified _DCDLQEDACYNCGR_ 0 0 0 A0A0S2Z4Q3;A0A0S2Z4K2;P62633 A0A0S2Z4Q3 A0A0S2Z4Q3 CNBP Cellular nucleic acid-binding protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.3281 2 888.324535 1774.63452 NaN NaN NaN -0.4436 -0.00039406 NaN NaN NaN NaN 39.863 0.3576 39.863 39.647 40.004 0 0 0 0 4.2647E-22 1 21114 133.89 124.94 1 NaN NaN 0 6676500 0 6676500 4242 565 1576 1621 6657 6657 DCDLQEDACYNCGR 14 0 1 Unmodified _DCDLQEDACYNCGR_ 0 0 0 A0A0S2Z4Q3;A0A0S2Z4K2;P62633 A0A0S2Z4Q3 A0A0S2Z4Q3 CNBP Cellular nucleic acid-binding protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.3231 2 888.324535 1774.63452 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.741 1 39.741 39.241 40.241 0 0 0 0 0.044523 1 21116 41.164 41.164 1 4243 565 1576 1621 6658 6658 DCEVVMMIGLPGAGK 15 1 0 2 Oxidation (M) _DCEVVM(ox)M(ox)IGLPGAGK_ DCEVVM(1)M(1)IGLPGAGK DCEVVM(47.15)M(47.15)IGLPGAGK 0 2 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.3845 2 804.875144 1607.73574 NaN NaN NaN 0.041068 3.3055E-05 NaN NaN NaN NaN 89.663 0.63739 89.663 89.25 89.887 0 0 0 0 0.0027359 1 53909 47.154 43.73 1 NaN NaN 0 11576000 0 11576000 4244 999 1577 1622 6659 6659 787;788 DCEVVMMIGLPGAGK 15 1 0 2 Oxidation (M) _DCEVVM(ox)M(ox)IGLPGAGK_ DCEVVM(1)M(1)IGLPGAGK DCEVVM(101.93)M(101.93)IGLPGAGK 0 2 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.3857 2 804.875144 1607.73574 NaN NaN NaN -0.83962 -0.00067579 NaN NaN NaN NaN 88.793 0.51779 88.793 88.602 89.12 0 0 0 0 5.9429E-08 1 54670 101.93 94.903 1 NaN NaN 0 26714000 0 26714000 4245 999 1577 1622 6660 6660 787;788 DCFGCLR 7 0 1 Unmodified _DCFGCLR_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.1942 2 464.194205 926.373857 88055.16 0.39362 0.00018272 -0.58026 -0.00026935 -0.18664 -8.6636E-05 464.194134871947 469.198222648426 46.389 1.1971 46.389 45.814 47.011 3.8147E-06 545 99 9 0 0 0 0.026968 1 25420 84.025 65.36 1 0.87163 1.0161 0 474790000 257740000 217050000 4246 181 1578 1623 6661 6661 DCLSIPYR 8 0 1 Unmodified _DCLSIPYR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2506 2 512.250034 1022.48552 85999.3 0.60274 0.00030875 0.41078 0.00021042 1.0135 0.00051918 512.250249932415 517.254506539262 71.875 0.67693 71.875 71.674 72.35 -7.6294E-06 194 55 5 0 0 0 0.011116 1 41945 70.67 57.022 1 0.6209 0.64187 0 13878000 8372000 5505900 4247 1665 1579 1624 6662 6662 DCLSIPYR 8 0 1 Unmodified _DCLSIPYR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.2504 2 512.250034 1022.48552 86028.52 0.46866 0.00024007 0.24631 0.00012617 0.71497 0.00036625 512.249951518177 517.254418294571 70.799 0.84068 70.799 70.471 71.312 0 186 63 4 0 0 0 0.017037 1 42239 60.709 51.468 1 0.61964 0.60807 0 14045000 6747600 7297400 4248 1665 1579 1624 6663 6663 DCVAVAGPLGVTHFLILSK 19 1 0 Unmodified _DCVAVAGPLGVTHFLILSK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1003.5568 2 999.048061 1996.08157 60769.82 0.59031 0.00058975 0.17409 0.00017393 0.7644 0.00076367 999.549663156401 1003.05559867647 123.36 0.48633 123.36 123.15 123.63 7.6294E-06 205 36 8 0 0 0 2.5967E-05 2 79962 64.394 60.949 1 0.76559 0.75343 0 23951000 13215000 10735000 4249 493 1580 1625 6664;6665 6665 DCVAVAGPLGVTHFLILSK 19 1 0 Unmodified _DCVAVAGPLGVTHFLILSK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.0399 3 666.367799 1996.08157 74068.31 0.88885 0.0005923 -0.40763 -0.00027163 0.48122 0.00032067 666.702103945117 669.039176007227 123.36 0.62531 123.36 123.08 123.7 -7.6294E-06 251 47 9 0 0 0 0.0001485 1 79984 40.369 40.369 1 0.65436 0.66967 0 17707000 11146000 6560800 4250 493 1580 1625 6666 6666 DCVAVAGPLGVTHFLILSK 19 1 0 Unmodified _DCVAVAGPLGVTHFLILSK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1003.0562 2 999.048061 1996.08157 60514.71 0.86304 0.00086222 0.28725 0.00028698 1.1503 0.0011492 999.549848492215 1003.05542882444 122.97 0.53465 122.97 122.59 123.12 0 202 40 7 0 0 0 3.5346E-05 2 81415 45.115 44.62 1 0.73353 0.7902 0 37900000 22816000 15083000 4251 493 1580 1625 6667;6668 6667 DCVAVAGPLGVTHFLILSK 19 1 0 Unmodified _DCVAVAGPLGVTHFLILSK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.0392 3 666.367799 1996.08157 73744.72 1.0443 0.00069586 -0.19285 -0.00012851 0.8514 0.00056735 666.36783323274 669.039291218315 122.97 0.52129 122.97 122.59 123.11 0 208 39 9 0 0 0 0.00012364 1 81540 42.052 42.052 1 0.64385 0.7176 0 51844000 31977000 19867000 4252 493 1580 1625 6669 6669 DCVAVAGPLGVTHFLILSK 19 1 0 Unmodified _DCVAVAGPLGVTHFLILSK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1003.5588 2 999.048061 1996.08157 60398.36 0.72252 0.00072184 0.92956 0.00092867 1.6521 0.0016505 999.550001656641 1003.05589781772 134.44 0.26161 134.44 134.33 134.59 0 54 10 11 0 0 0 6.8866E-07 2 82077 97.767 90.727 1 1.3162 1.0947 0 46944000 20141000 26803000 4253 493 1580 1625 6670;6671 6670 DCVAVAGPLGVTHFLILSK 19 1 0 Unmodified _DCVAVAGPLGVTHFLILSK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.04 3 666.367799 1996.08157 74202.95 0.98029 0.00065323 0.62786 0.00041838 1.6081 0.0010716 666.369143885745 669.372285852539 134.46 0.40211 134.46 134.35 134.75 0 62 13 10 0 0 0 5.8227E-06 1 82096 62.684 59.843 1 0.38004 0.31036 0 33421000 21390000 12031000 4254 493 1580 1625 6672 6672 DCVAVAGPLGVTHFLILSK 19 1 0 Unmodified _DCVAVAGPLGVTHFLILSK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1003.2695 2 999.048061 1996.08157 61038.89 0.39421 0.00039384 1.5244 0.001523 1.9186 0.0019168 999.549474327702 1003.55679474358 134.4 0.27052 134.4 134.26 134.53 0 57 10 10 0 0 0 6.3962E-08 3 81104 101.62 92.336 1 1.0849 0.91575 0 55944000 23997000 31947000 4255 493 1580 1625 6673;6674;6675 6673 DCVAVAGPLGVTHFLILSK 19 1 0 Unmodified _DCVAVAGPLGVTHFLILSK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.0394 3 666.367799 1996.08157 74321.39 0.74861 0.00049885 0.3695 0.00024622 1.1181 0.00074508 666.368872312768 669.038836927841 134.4 0.43195 134.4 134.28 134.71 1.5259E-05 53 14 9 0 0 0 0.011393 1 81167 22.24 19.439 1 0.31942 0.2686 0 50929000 30992000 19936000 4256 493 1580 1625 6676 6676 DDAHYAVQAR 10 0 1 Unmodified _DDAHYAVQAR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.2745 2 573.270344 1144.52613 79860.42 0.39735 0.00022779 0.075311 4.3174E-05 0.47266 0.00027096 573.270344635784 578.274498111336 20.366 0.58667 20.366 20.205 20.792 0 122 24 8 0 0 0 1.3473E-05 1 6786 102.62 93.676 1 1.0516 1.1706 0 79125000 39334000 39791000 4257 1183 1581 1626 6677 6677 DDAQSVETLGK 11 1 0 Unmodified _DDAQSVETLGK_ 0 0 0 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.7908 2 581.78295 1161.55135 78417.77 0.74488 0.00043336 0.25773 0.00014994 1.0026 0.0005833 581.782824245955 585.790026538893 38.593 0.76498 38.593 38.247 39.012 0 281 63 6 0 0 0 1.4971E-05 1 19796 106.88 99.235 1 1.1728 1.2767 0 49088000 23425000 25664000 4258 1945 1582 1627 6678 6678 DDAQSVETLGK 11 1 0 Unmodified _DDAQSVETLGK_ 0 0 0 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.7829 2 581.78295 1161.55135 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.883 1 37.883 37.383 38.383 0 0 0 0 3.647E-13 1 19767 127.4 103.24 1 4259 1945 1582 1627 6679 6679 DDAQSVETLGK 11 1 0 Unmodified _DDAQSVETLGK_ 0 0 0 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.7903 2 581.78295 1161.55135 78769.74 0.54067 0.00031455 0.15377 8.9461E-05 0.69444 0.00040401 581.782787459312 585.790029689154 44.194 0.79956 44.194 43.738 44.538 0 226 54 6 0 0 0 0.00042966 3 20926 79.148 73.946 1 1.9245 1.5425 0 7425100 2720600 4704500 4260 1945 1582 1627 6680;6681;6682 6680 DDAQSVETLGK 11 1 0 Unmodified _DDAQSVETLGK_ 0 0 0 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.7904 2 581.78295 1161.55135 78964.92 0.59569 0.00034656 -0.03637 -2.1159E-05 0.55932 0.0003254 581.782448727927 585.790009672164 44.449 1.0166 44.449 43.826 44.842 -3.8147E-06 283 68 6 0 0 0 0.0006898 2 20534 73.233 67.198 1 1.8483 1.5076 0 5901200 2230200 3671000 4261 1945 1582 1627 6683;6684 6684 DDAQSVETLGKPK 13 2 0 Unmodified _DDAQSVETLGKPK_ 0 0 1 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3725 2 694.356813 1386.69907 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.81 1 31.81 31.31 32.31 -1.9073E-06 0 0 0 1.6084E-06 1 15715 106.29 95.767 1 4262 1945 1583 1628 6685 6685 DDAQSVETLGKPK 13 2 0 Unmodified _DDAQSVETLGKPK_ 0 0 1 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.3711 2 694.356813 1386.69907 73560.96 0.39266 0.00027265 0.053418 3.7091E-05 0.44608 0.00030974 694.356866661542 702.37105787833 36.862 0.60246 36.862 36.541 37.144 0 260 53 7 0 0 0 0.00020471 2 16519 97.734 93.717 1 1.9641 1.6763 0 16512000 5755700 10756000 4263 1945 1583 1628 6686;6687 6687 DDAQSVETLGKPK 13 2 0 Unmodified _DDAQSVETLGKPK_ 0 0 1 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.3713 2 694.356813 1386.69907 72484.63 0.37672 0.00026158 0.14236 9.8846E-05 0.51907 0.00036042 694.356752767192 702.37089828232 37.004 0.77051 37.004 36.68 37.451 -3.8147E-06 358 65 9 0 0 0 0.00012916 2 16078 98.898 95.011 1 2.0911 1.7678 0 11911000 3920300 7991000 4264 1945 1583 1628 6688;6689 6688 DDDIAALVVDNGSGMCK 17 1 0 Acetyl (Protein N-term) _(ac)DDDIAALVVDNGSGMCK_ 1 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;B4DW52;G5E9R0;E7EVS6;C9JTX5;C9JZR7 Q53GK6 Q53GK6 PS1TP5BP1;ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 915.9127 2 911.403308 1820.79206 63591.3 0.7022 0.00063998 -0.6969 -0.00063516 0.0052984 4.829E-06 911.903862921843 915.409592030727 121.55 0.36913 121.55 121.37 121.74 0 80 28 6 0 0 0 6.0634E-05 2 80469 80.469 76.128 1 2.0967 2.0993 0 6752400 1757700 4994700 4265 1624 1584 1629 6690;6691 6690 DDDIAALVVDNGSGMCK 17 1 0 Acetyl (Protein N-term) _(ac)DDDIAALVVDNGSGMCK_ 1 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;B4DW52;G5E9R0;E7EVS6;C9JTX5;C9JZR7 Q53GK6 Q53GK6 PS1TP5BP1;ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 915.4107 2 911.403308 1820.79206 NaN NaN NaN -0.099904 -9.1053E-05 NaN NaN NaN NaN 134.26 0.2692 134.26 134.12 134.39 0 0 0 0 0.00021972 1 80985 68.034 60.31 1 NaN NaN 0 5332100 0 5332100 4266 1624 1584 1629 6692 6692 DDDIAALVVDNGSGMCK 17 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)DDDIAALVVDNGSGM(ox)CK_ DDDIAALVVDNGSGM(1)CK DDDIAALVVDNGSGM(77.08)CK 1 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;B4DW52;G5E9R0;E7EVS6;C9JTX5;C9JZR7 Q53GK6 Q53GK6 PS1TP5BP1;ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 919.4011 2 919.400766 1836.78698 61826.04 0.58279 0.00053582 -1.4301 -0.0013149 -0.84734 -0.00077905 919.40088765314 923.408059201598 127.4 1.4329 127.4 126.63 128.06 0 289 58 11 0 0 0 3.4011E-05 3 76789 77.078 76.766 1 2.0614 1.6327 0 18553000 6577500 11975000 4267 1624 1584 1630 6693;6694;6695 6695 1409 DDDIAALVVDNGSGMCK 17 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)DDDIAALVVDNGSGM(ox)CK_ DDDIAALVVDNGSGM(1)CK DDDIAALVVDNGSGM(98.53)CK 1 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;B4DW52;G5E9R0;E7EVS6;C9JTX5;C9JZR7 Q53GK6 Q53GK6 PS1TP5BP1;ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 919.9034 2 919.400766 1836.78698 61993.02 0.52373 0.00048152 -2.1266 -0.0019552 -1.6029 -0.0014737 919.400856008131 923.408062738249 127.42 1.1283 127.42 126.74 127.87 0 329 48 11 0 0 0 1.1123E-07 3 75812 98.531 98.362 1 1.9704 1.5783 0 20228000 7454200 12773000 4268 1624 1584 1630 6696;6697;6698 6698 1409 DDEEADAIYAALDK 14 1 0 Unmodified _DDEEADAIYAALDK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.3484 2 769.846475 1537.6784 69588.13 0.55856 0.00043 0.17785 0.00013692 0.73641 0.00056692 769.846551091891 773.853673178467 103.91 0.69812 103.91 103.55 104.25 0 219 61 5 0 0 0 6.8264E-07 1 65664 96.64 93.528 1 0.83176 0.83265 0 13961000 8013700 5947300 4269 1418 1585 1631 6699 6699 DDEEADAIYAALDK 14 1 0 Unmodified _DDEEADAIYAALDK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.8459 2 769.846475 1537.6784 NaN NaN NaN 0.23067 0.00017758 NaN NaN NaN NaN 116.23 0.43156 116.23 116.02 116.45 0 0 0 0 0.018428 1 68261 46.378 39.49 1 NaN NaN 0 893730 893730 0 4270 1418 1585 1631 6700 6700 DDEEADAIYAALDK 14 1 0 Unmodified _DDEEADAIYAALDK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 770.3481 2 769.846475 1537.6784 72711.66 1.0246 0.00078879 0.15107 0.0001163 1.1757 0.00090509 769.846678305179 773.853779932274 116.25 0.53543 116.25 116.08 116.62 0 95 24 6 0 0 0 0.01982 1 67380 34 33.245 1 1.2186 1.0089 0 1688800 791850 896960 4271 1418 1585 1631 6701 6701 DDEENYLDLFSHK 13 1 0 Unmodified _DDEENYLDLFSHK_ 0 0 0 B4DDX2;Q07666;B4E043;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.3602 2 812.859917 1623.70528 NaN NaN NaN 0.18149 0.00014753 NaN NaN NaN NaN 100.2 0.22704 100.2 100.01 100.23 0 0 0 0 0.019672 1 61439 57.836 51.147 1 NaN NaN 0 3129300 3129300 0 4272 962 1586 1632 6702 6702 DDEENYLDLFSHK 13 1 0 Unmodified _DDEENYLDLFSHK_ 0 0 0 B4DDX2;Q07666;B4E043;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.8618 2 812.859917 1623.70528 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.09 1 100.09 99.594 100.59 0 0 0 0 0.036431 1 61347 53.569 46.978 1 4273 962 1586 1632 6703 6703 DDEENYLDLFSHK 13 1 0 Unmodified _DDEENYLDLFSHK_ 0 0 0 B4DDX2;Q07666;B4E043;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.3642 2 812.859917 1623.70528 69293.92 0.74779 0.00060785 0.33903 0.00027558 1.0868 0.00088343 812.8604067567 816.867119083618 99.503 0.57686 99.503 99.219 99.796 0 195 46 6 0 0 0 0.00023067 1 62378 69.01 62.079 1 1.4243 1.4686 0 11529000 5192400 6336700 4274 962 1586 1632 6704 6704 DDESDAPCSSLGLSSSGSGDAAR 23 0 1 Unmodified _DDESDAPCSSLGLSSSGSGDAAR_ 0 0 0 A0A1B0GUH9;A0A1P0AZG4;A0PJI9 A0A1B0GUH9 A0A1B0GUH9 C10orf12 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1126.4683 2 1120.96403 2239.91351 NaN NaN NaN 0.23438 0.00026273 NaN NaN NaN NaN 72.837 0.45627 72.837 72.634 73.09 0 0 0 0 7.246E-05 1 37595 48.883 48.662 1 NaN NaN 0 1199700 0 1199700 4275 630 1587 1633 6705 6705 DDEVQVVR 8 0 1 Unmodified _DDEVQVVR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.2432 2 480.243264 958.471974 86271.78 0.12859 6.1755E-05 0.064529 3.099E-05 0.19312 9.2745E-05 480.243229843446 485.247373054518 33.665 1.1019 33.665 33.328 34.43 0 596 104 7 0 0 0 0.00080118 2 16653 127.31 100.7 1 0.84771 1.0023 0 262730000 146680000 116050000 4276 1629;1214 1588 1634 6706;6707 6707 DDEVQVVR 8 0 1 Unmodified _DDEVQVVR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.2433 2 480.243264 958.471974 86560.06 -0.02084 -1.0008E-05 0.070521 3.3867E-05 0.049681 2.3859E-05 480.243267326971 485.247319797267 33.005 1.0737 33.005 32.702 33.775 0 508 93 7 0 0 0 0.00098664 2 16392 119.89 76.887 1 0.88237 1.0208 0 270340000 147970000 122370000 4277 1629;1214 1588 1634 6708;6709 6709 DDEVQVVR 8 0 1 Unmodified _DDEVQVVR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.2473 2 480.243264 958.471974 84897.3 0.17836 8.5654E-05 0.048908 2.3488E-05 0.22726 0.00010914 480.243230354709 485.247265165411 38.087 1.2701 38.087 37.565 38.835 0 535 97 7 0 0 0 0.0029231 2 17112 98.418 61.259 1 0.56021 0.46449 0 20428000 12623000 7804600 4278 1629;1214 1588 1634 6710;6711 6711 DDEVQVVR 8 0 1 Unmodified _DDEVQVVR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.247 2 480.243264 958.471974 86735.47 0.093704 4.5001E-05 0.029292 1.4067E-05 0.123 5.9068E-05 480.243226896733 485.247264498759 38.131 1.1178 38.131 37.623 38.741 0 497 89 8 0 0 0 0.0072502 2 16649 83.753 51.143 1 0.57283 0.48475 0 18292000 11834000 6457600 4279 1629;1214 1588 1634 6712;6713 6713 DDFLGAAEGK 10 1 0 Unmodified _DDFLGAAEGK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.744 2 511.743096 1021.47164 NaN NaN NaN 0.054059 2.7664E-05 NaN NaN NaN NaN 60.608 0.4233 60.608 60.378 60.801 -3.8147E-06 0 0 0 0.023327 1 34478 53.751 27.367 1 NaN NaN 0 6304600 6304600 0 4280 1233 1589 1635 6714 6714 DDGLFSGDPNWFPK 14 1 0 Unmodified _DDGLFSGDPNWFPK_ 0 0 0 X6RJP6;P37802 X6RJP6 X6RJP6 TAGLN2 Transgelin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.8685 2 797.862263 1593.70997 NaN NaN NaN -0.64751 -0.00051662 NaN NaN NaN NaN 119.2 0.38656 119.2 119.04 119.43 0 0 0 0 0.0060049 1 78582 54.784 48.4 1 NaN NaN 0 3076300 0 3076300 4281 1550 1590 1636 6715 6715 DDGNQPQDQITITGYEK 17 1 0 Unmodified _DDGNQPQDQITITGYEK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;Q96CF6;Q2HJC8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 965.4525 2 961.442334 1920.87011 NaN NaN NaN 0.66493 0.00063929 NaN NaN NaN NaN 73.447 0.24069 73.447 73.3 73.54 0 0 0 0 0.00022302 1 42999 66.989 52.731 1 NaN NaN 0 8865400 0 8865400 4282 154 1591 1637 6716 6716 DDGNQPQDQITITGYEK 17 1 0 Unmodified _DDGNQPQDQITITGYEK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;Q96CF6;Q2HJC8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 961.4419 2 961.442334 1920.87011 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.391 1 73.391 72.891 73.891 0 0 0 0 0.0090945 1 43054 45.115 39.27 1 4283 154 1591 1637 6717 6717 DDGNQPQDQITITGYEK 17 1 0 Unmodified _DDGNQPQDQITITGYEK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;Q96CF6;Q2HJC8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 965.951 2 961.442334 1920.87011 NaN NaN NaN 0.2548 0.00024497 NaN NaN NaN NaN 72.522 0.43398 72.522 72.33 72.764 0 0 0 0 6.4187E-09 2 43596 94.688 87.322 1 NaN NaN 0 7322900 0 7322900 4284 154 1591 1637 6718;6719 6719 DDGNQPQDQITITGYEK 17 1 0 Unmodified _DDGNQPQDQITITGYEK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;Q96CF6;Q2HJC8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 961.4432 2 961.442334 1920.87011 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.504 1 72.504 72.004 73.004 0 0 0 0 0.00036443 1 43521 70.622 64.776 1 4285 154 1591 1637 6720 6720 DDGSTLMEIDGDK 13 1 0 Oxidation (M) _DDGSTLM(ox)EIDGDK_ DDGSTLM(1)EIDGDK DDGSTLM(77.06)EIDGDK 0 1 0 Q6FI97;Q53FS0;O96019;H7C5S0;C9JQT2 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.2994 2 706.298304 1410.58205 73885.75 0.7044 0.00049752 -0.14896 -0.00010521 0.55544 0.00039231 706.298308212821 710.305080413433 53.407 1.0566 53.407 52.647 53.704 3.8147E-06 180 80 5 0 0 0 5.8396E-05 4 29964 77.062 74.908 1 0.84996 0.8325 0 22192000 13359000 8832900 4286 1434 1592 1638 6721;6722;6723;6724 6723 1127 DDGSTLMEIDGDK 13 1 0 Oxidation (M) _DDGSTLM(ox)EIDGDK_ DDGSTLM(1)EIDGDK DDGSTLM(57.17)EIDGDK 0 1 0 Q6FI97;Q53FS0;O96019;H7C5S0;C9JQT2 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3058 2 706.298304 1410.58205 NaN NaN NaN 0.80223 0.00056661 NaN NaN NaN NaN 53.066 0.50946 53.066 52.707 53.216 0 0 0 0 0.001737 1 29415 57.175 52.709 1 NaN NaN 0 9623300 0 9623300 4287 1434 1592 1638 6725 6725 1127 DDGSTLMEIDGDK 13 1 0 Oxidation (M) _DDGSTLM(ox)EIDGDK_ DDGSTLM(1)EIDGDK DDGSTLM(79.23)EIDGDK 0 1 0 Q6FI97;Q53FS0;O96019;H7C5S0;C9JQT2 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.2986 2 706.298304 1410.58205 73800.94 0.6738 0.0004759 -0.066585 -4.7029E-05 0.60722 0.00042888 706.298169319894 710.807098921832 52.032 0.6432 52.032 51.732 52.375 0 148 49 5 0 0 0 6.2593E-05 1 29522 79.23 76.476 1 0.65616 0.67841 0 18516000 12316000 6200700 4288 1434 1592 1638 6726 6726 1127 DDGSTLMEIDGDK 13 1 0 Oxidation (M) _DDGSTLM(ox)EIDGDK_ DDGSTLM(1)EIDGDK DDGSTLM(102.52)EIDGDK 0 1 0 Q6FI97;Q53FS0;O96019;H7C5S0;C9JQT2 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.9092 2 706.298304 1410.58205 73372.56 0.83395 0.00058902 -0.23565 -0.00016644 0.59829 0.00042257 706.298179991493 710.304875095379 52.445 0.6279 52.445 52.128 52.756 -3.8147E-06 183 47 6 0 0 0 3.3002E-06 1 29941 102.52 99.672 1 0.86136 0.91996 0 21018000 12433000 8585000 4289 1434 1592 1638 6727 6727 1127 DDGVFVQEVTQNSPAAR 17 0 1 Unmodified _DDGVFVQEVTQNSPAAR_ 0 0 0 Q09666;B4DTV0;E9PQE3;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 921.9468 2 916.942304 1831.87006 64998.18 0.73105 0.00067033 0.12008 0.00011011 0.85113 0.00078043 916.941997130928 921.946279109081 86.572 0.71972 86.572 86.198 86.917 0 231 53 6 0 0 0 7.0301E-35 2 52025 161.48 152.75 1 1.802 1.8694 0 22660000 9457700 13202000 4290 1696 1593 1639 6728;6729 6728 DDGVFVQEVTQNSPAAR 17 0 1 Unmodified _DDGVFVQEVTQNSPAAR_ 0 0 0 Q09666;B4DTV0;E9PQE3;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.9488 2 916.942304 1831.87006 66622.79 0.78471 0.00071953 -0.027673 -2.5375E-05 0.75704 0.00069416 916.941761298569 921.945418074799 85.878 0.52846 85.878 85.608 86.137 0 133 39 6 0 0 0 6.8737E-09 2 53064 100.55 95.058 1 1.749 1.8789 0 25519000 7385800 18133000 4291 1696 1593 1639 6730;6731 6731 DDGVFVQEVTQNSPAAR 17 0 1 Unmodified _DDGVFVQEVTQNSPAAR_ 0 0 0 Q09666;B4DTV0;E9PQE3;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 916.9432 2 916.942304 1831.87006 63641.41 0.57404 0.00052636 -0.12511 -0.00011472 0.44893 0.00041164 917.44366188217 921.946239602088 98.699 0.5198 98.699 98.433 98.953 0 130 33 5 0 0 0 0.010161 2 55612 31.664 27.65 1 1.0445 0.87754 0 4328300 2296000 2032300 4292 1696 1593 1639 6732;6733 6732 DDGVFVQEVTQNSPAAR 17 0 1 Unmodified _DDGVFVQEVTQNSPAAR_ 0 0 0 Q09666;B4DTV0;E9PQE3;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 921.9444 2 916.942304 1831.87006 NaN NaN NaN -0.66658 -0.00061121 NaN NaN NaN NaN 98.718 0.45514 98.718 98.48 98.936 0 0 0 0 5.6816E-05 1 54871 73.927 66.203 1 NaN NaN 0 2099700 0 2099700 4293 1696 1593 1639 6734 6734 DDGVSIPGEYTSFLAPISSSK 21 1 0 Unmodified _DDGVSIPGEYTSFLAPISSSK_ 0 0 0 B4DV00;B2RDD7;O14744;H0YJD3 B4DV00 B4DV00 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1086.0333 2 1085.53115 2169.04774 59456.18 0.65819 0.00071449 -2.4674 -0.0026785 -1.8092 -0.001964 1085.53173739019 1090.03803038474 124.48 0.31288 124.48 124.34 124.65 0 57 19 6 0 0 0 8.723E-05 1 82812 39.509 39.509 1 1.7112 1.7222 0 7133800 2335200 4798600 4294 885 1594 1640 6735 6735 DDIAQVDYVEPSQNTISLK 19 1 0 Unmodified _DDIAQVDYVEPSQNTISLK_ 0 0 0 B4E0Q4;B4DZJ7;O00267;B4DJK4 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1072.0367 2 1068.02877 2134.04299 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.72 1 100.72 100.22 101.22 0 0 0 0 8.3908E-05 1 61790 67.115 60.535 1 4295 1056 1595 1641 6736 6736 DDIAQVDYVEPSQNTISLK 19 1 0 Unmodified _DDIAQVDYVEPSQNTISLK_ 0 0 0 B4E0Q4;B4DZJ7;O00267;B4DJK4 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1072.0381 2 1068.02877 2134.04299 NaN NaN NaN 0.55605 0.00059388 NaN NaN NaN NaN 100.22 0.19322 100.22 100.12 100.31 7.6294E-06 0 0 0 0.0065014 1 62921 41.621 28.421 1 NaN NaN 0 6582500 0 6582500 4296 1056 1595 1641 6737 6737 DDIAQVDYVEPSQNTISLK 19 1 0 Unmodified _DDIAQVDYVEPSQNTISLK_ 0 0 0 B4E0Q4;B4DZJ7;O00267;B4DJK4 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1072.0358 2 1068.02877 2134.04299 61265.69 0.4711 0.00050314 0.39083 0.00041742 0.86193 0.00092056 1068.52995736054 1072.53893139605 112.98 0.23222 112.98 112.86 113.09 0 30 9 5 0 0 0 0.010789 1 65723 25.322 25.322 1 1.396 1.1665 0 2223400 849440 1373900 4297 1056 1595 1641 6738 6738 DDIDLDALAAEIEGAGAAK 19 1 0 Unmodified _DDIDLDALAAEIEGAGAAK_ 0 0 0 Q8N5A0;A0A087WUT6;O60841;A0JLR8;Q05CQ1 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.4588 2 929.457453 1856.90035 NaN NaN NaN -0.24743 -0.00022997 NaN NaN NaN NaN 131.6 0.28708 131.6 131.51 131.8 0 0 0 0 4.3657E-06 1 85928 69.716 57.333 1 NaN NaN 0 2231600 2231600 0 4298 414 1596 1642 6739 6739 DDIDLDALAAEIEGAGAAK 19 1 0 Unmodified _DDIDLDALAAEIEGAGAAK_ 0 0 0 Q8N5A0;A0A087WUT6;O60841;A0JLR8;Q05CQ1 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.4579 2 929.457453 1856.90035 NaN NaN NaN -0.85323 -0.00079304 NaN NaN NaN NaN 131.39 0.23643 131.39 131.24 131.48 0 0 0 0 9.1651E-13 1 87877 94.717 86.612 1 NaN NaN 0 3181900 3181900 0 4299 414 1596 1642 6740 6740 DDIDLDALAAEIEGAGAAK 19 1 0 Unmodified _DDIDLDALAAEIEGAGAAK_ 0 0 0 Q8N5A0;A0A087WUT6;O60841;A0JLR8;Q05CQ1 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 933.465 2 929.457453 1856.90035 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.38 1 131.38 130.88 131.88 1.5259E-05 0 0 0 3.4772E-10 1 87904 102.73 88.308 1 4300 414 1596 1642 6741 6741 DDIENIAR 8 0 1 Unmodified _DDIENIAR_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2395 2 473.235439 944.456324 88309.83 0.025674 1.215E-05 0.25485 0.0001206 0.28052 0.00013275 473.235629874603 478.239619954182 43.313 0.61537 43.313 43.024 43.64 0 204 49 7 0 0 0 0.00098664 2 23054 119.89 71.384 1 2.1917 2.441 0 80974000 22783000 58191000 4301 1391 1597 1643 6742;6743 6742 DDIENIAR 8 0 1 Unmodified _DDIENIAR_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.2391 2 473.235439 944.456324 88166.16 0.36006 0.00017039 0.12988 6.1465E-05 0.48994 0.00023186 473.235580385637 478.239480457216 42.597 0.91523 42.597 42.12 43.035 0 240 75 6 0 0 0 0.0086589 2 22786 77.674 49.251 1 2.2375 2.5645 0 51360000 14303000 37057000 4302 1391 1597 1643 6744;6745 6744 DDIENIAR 8 0 1 Unmodified _DDIENIAR_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.2398 2 473.235439 944.456324 NaN NaN NaN -0.0060547 -2.8653E-06 NaN NaN NaN NaN 50.101 0.88077 50.101 49.615 50.495 0 0 0 0 0.017319 1 23927 67.032 40.43 1 NaN NaN 0 2853000 0 2853000 4303 1391 1597 1643 6746 6746 DDIIICEIGDVFK 13 1 0 Unmodified _DDIIICEIGDVFK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.8914 2 768.884349 1535.75415 70443.23 1.1571 0.00088968 -0.13648 -0.00010494 1.0206 0.00078475 768.88450980629 772.890861438564 131.2 0.58687 131.2 130.98 131.57 0 176 38 6 0 0 0 0.00011761 2 85621 76.332 76.332 1 1.1513 1.2 0 14964000 6254100 8710300 4304 2147 1598 1644 6747;6748 6748 DDIIICEIGDVFK 13 1 0 Unmodified _DDIIICEIGDVFK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.8918 2 768.884349 1535.75415 69793.57 0.87422 0.00067218 0.27221 0.0002093 1.1464 0.00088148 768.884893882412 772.89130531456 130.86 0.5564 130.86 130.61 131.17 0 191 40 6 0 0 0 0.00013633 2 87468 88.441 81.017 1 1.1619 1.1609 0 15203000 8004300 7198700 4305 2147 1598 1644 6749;6750 6750 DDILINRPAK 10 1 1 Unmodified _DDILINRPAK_ 0 0 1 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.8417 2 577.830037 1153.64552 80569.51 0.68748 0.00039725 -0.22571 -0.00013042 0.46177 0.00026683 577.829846957004 586.841332722591 39.266 0.39016 39.266 39.093 39.484 0 114 29 5 0 0 0 0.010294 1 20263 71.501 71.501 1 0.89568 1.0052 0 21582000 11810000 9772600 4306 1936 1599 1645 6751 6751 DDILINRPAK 10 1 1 Unmodified _DDILINRPAK_ 0 0 1 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.8414 2 577.830037 1153.64552 NaN NaN NaN -0.53673 -0.00031014 NaN NaN NaN NaN 38.136 0.29487 38.136 37.985 38.279 0 0 0 0 0.0010996 1 19905 98.033 63.225 1 NaN NaN 0 20977000 0 20977000 4307 1936 1599 1645 6752 6752 DDINLLPSK 9 1 0 Unmodified _DDINLLPSK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.7777 2 507.776939 1013.53933 84370.61 0.30925 0.00015703 -0.06593 -3.3478E-05 0.24332 0.00012355 507.776928977724 511.784344845254 75.502 0.76207 75.502 75.029 75.791 0 191 67 5 0 0 0 0.0056163 2 45513 66.273 39.831 1 0.64583 0.65459 0 12932000 7675000 5256800 4308 1837 1600 1646 6753;6754 6754 DDINLLPSK 9 1 0 Unmodified _DDINLLPSK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.777 2 507.776939 1013.53933 85861.46 0.35102 0.00017824 -0.10775 -5.4714E-05 0.24327 0.00012353 507.776673517728 511.784055915655 86.585 0.97826 86.585 86.021 86.999 -7.6294E-06 281 65 7 0 0 0 0.0061814 2 47568 64.841 42.755 1 1.2848 1.0134 0 5925200 2687600 3237600 4309 1837 1600 1646 6755;6756 6756 DDINLLPSK 9 1 0 Unmodified _DDINLLPSK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.7763 2 507.776939 1013.53933 84954.68 0.38594 0.00019597 -0.18545 -9.4168E-05 0.20049 0.0001018 507.77650942655 511.784077936068 86.702 0.92457 86.702 86.251 87.176 0 274 58 6 0 0 0 0.0031039 2 46773 72.643 41.569 1 1.3395 1.0995 0 5196300 2248100 2948100 4310 1837 1600 1646 6757;6758 6758 DDISTAAGMVK 11 1 0 Oxidation (M) _DDISTAAGM(ox)VK_ DDISTAAGM(1)VK DDISTAAGM(82.64)VK 0 1 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.2759 2 562.268621 1122.52269 NaN NaN NaN 0.016047 9.0226E-06 NaN NaN NaN NaN 39.423 0.53428 39.423 39.093 39.628 0 0 0 0 0.00047587 3 20367 82.645 68.642 1 NaN NaN 0 28764000 0 28764000 4311 1914 1601 1647 6759;6760;6761 6759 1747 DDISTAAGMVK 11 1 0 Oxidation (M) _DDISTAAGM(ox)VK_ DDISTAAGM(1)VK DDISTAAGM(78.06)VK 0 1 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.2758 2 562.268621 1122.52269 79920.13 0.70617 0.00039706 -0.014565 -8.1893E-06 0.69161 0.00038887 562.268663660389 566.275599962642 38.505 0.57152 38.505 38.191 38.763 0 195 49 7 0 0 0 0.00021488 2 20191 78.06 61.521 1 2.5475 2.8688 0 58153000 18427000 39726000 4312 1914 1601 1647 6762;6763 6762 1747 DDISTAAGMVK 11 1 0 Oxidation (M) _DDISTAAGM(ox)VK_ DDISTAAGM(1)VK DDISTAAGM(60.72)VK 0 1 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.2689 2 562.268621 1122.52269 NaN NaN NaN -1.2499 -0.00070281 NaN NaN NaN NaN 37.835 0.46329 37.835 37.521 37.985 3.8147E-06 0 0 0 0.0027229 1 19675 60.717 47.138 1 NaN NaN 0 16824000 16824000 0 4313 1914 1601 1647 6764 6764 1747 DDLALFCLQELR 12 0 1 Unmodified _DDLALFCLQELR_ 0 0 0 Q53HG5;A8K4K9;Q15006;H0YAS9;E5RGJ2 Q53HG5 Q53HG5 EMC2 ER membrane protein complex subunit 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.8762 2 746.876859 1491.73916 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.22 1 123.22 122.72 123.72 0 0 0 0 0.041873 1 81814 43.512 33.559 1 4314 736 1602 1648 6765 6765 DDLGNTLEK 9 1 0 Unmodified _DDLGNTLEK_ 0 0 0 O75367;Q59FH0 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.7487 2 502.748379 1003.4822 85151.13 0.62462 0.00031402 -0.16458 -8.274E-05 0.46004 0.00023128 502.748407371561 506.755232793701 38.174 2.0903 38.174 37.527 39.618 0 852 173 9 0 0 0 2.8246E-06 3 19851 135 105.62 1 1.07 1.2806 0 889440000 425490000 463950000 4315 1401 1603 1649 6766;6767;6768 6768 DDLGNTLEK 9 1 0 Unmodified _DDLGNTLEK_ 0 0 0 O75367;Q59FH0 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.7484 2 502.748379 1003.4822 84400.31 0.17642 8.8695E-05 0.0092956 4.6733E-06 0.18572 9.3368E-05 502.748585315809 506.755282093855 37.397 1.9592 37.397 36.643 38.602 0 757 155 8 0 0 0 3.0707E-08 5 19568 147.19 113.63 1 1.1089 1.3096 0 1121400000 534440000 586940000 4316 1401 1603 1649 6769;6770;6771;6772;6773 6771 DDLGNTLEK 9 1 0 Unmodified _DDLGNTLEK_ 0 0 0 O75367;Q59FH0 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.7556 2 502.748379 1003.4822 84961.43 0.30236 0.00015201 -0.54769 -0.00027535 -0.24533 -0.00012334 502.74836536187 506.755034219897 43.324 2.4369 43.324 42.634 45.07 0 832 169 10 0 0 0 0.0018366 2 20609 80.219 57.212 1 1.1366 0.98608 0 129910000 60458000 69451000 4317 1401 1603 1649 6774;6775 6775 DDLGNTLEK 9 1 0 Unmodified _DDLGNTLEK_ 0 0 0 O75367;Q59FH0 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.7556 2 502.748379 1003.4822 84649.19 0.099809 5.0179E-05 -0.27848 -0.00014 -0.17867 -8.9826E-05 502.748517789418 506.755141752161 43.492 2.3075 43.492 42.699 45.006 0 721 154 9 0 0 0 0.0014178 4 20180 85.67 60.776 1 1.1454 0.97805 0 102550000 47760000 54787000 4318 1401 1603 1649 6776;6777;6778;6779 6778 DDLYAEQMER 10 0 1 Oxidation (M) _DDLYAEQM(ox)ER_ DDLYAEQM(1)ER DDLYAEQM(54.98)ER 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.2776 2 643.271892 1284.52923 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.547 1 29.547 29.047 30.047 0 0 0 0 0.0077908 1 14277 54.982 48.677 1 4319 2148 1604 1650 6780 6780 1987 DDNFGEGNDGGILDDK 16 1 0 Unmodified _DDNFGEGNDGGILDDK_ 0 0 0 A0A024R9J0;O60216 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.3546 2 840.85282 1679.69109 69835.14 0.55738 0.00046867 -0.14168 -0.00011913 0.4157 0.00034954 840.853024918184 844.859886744542 74.407 0.42989 74.407 74.155 74.585 0 80 32 4 0 0 0 0.00017365 1 43589 61.11 56.012 1 0.61544 0.60473 0 8975400 4961000 4014500 4320 280 1605 1651 6781 6781 DDNMFQIGK 9 1 0 Oxidation (M) _DDNM(ox)FQIGK_ DDNM(1)FQIGK DDNM(83.21)FQIGK 0 1 0 Q6IBA2;Q59G24;P53999;B7Z1Z0;Q6E433 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2495 2 542.242406 1082.47026 81671.6 0.58506 0.00031724 0.053141 2.8815E-05 0.6382 0.00034606 542.242588199984 546.249376726423 46.889 0.68552 46.889 46.551 47.236 0 190 65 4 0 0 0 0.00077862 1 25269 83.206 74.261 1 0.94244 1.0147 0 33427000 17622000 15804000 4321 1608 1606 1652 6782 6782 1396 DDNMFQIGK 9 1 0 Oxidation (M) _DDNM(ox)FQIGK_ DDNM(1)FQIGK DDNM(106.94)FQIGK 0 1 0 Q6IBA2;Q59G24;P53999;B7Z1Z0;Q6E433 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.2416 2 542.242406 1082.47026 81671.57 0.74392 0.00040339 -0.35781 -0.00019402 0.38611 0.00020937 542.242207762435 546.249088788005 47.63 0.83514 47.63 47.184 48.019 0 214 73 4 0 0 0 9.0898E-05 2 25795 106.94 98.018 1 0.90286 0.97465 0 34755000 18919000 15836000 4322 1608 1606 1652 6783;6784 6784 1396 DDNMFQIGK 9 1 0 Oxidation (M) _DDNM(ox)FQIGK_ DDNM(1)FQIGK DDNM(96.25)FQIGK 0 1 0 Q6IBA2;Q59G24;P53999;B7Z1Z0;Q6E433 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.2494 2 542.242406 1082.47026 82374.95 0.4343 0.00023549 -0.10123 -5.4889E-05 0.33307 0.0001806 542.242260787909 546.249420020033 46.107 0.67354 46.107 45.696 46.369 0 199 54 5 0 0 0 0.00031609 2 25351 96.253 86.665 1 0.96381 0.99408 0 32686000 16332000 16353000 4323 1608 1606 1652 6785;6786 6785 1396 DDNMFQIGK 9 1 0 Unmodified _DDNMFQIGK_ 0 0 0 Q6IBA2;Q59G24;P53999;B7Z1Z0;Q6E433 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 534.2455 2 534.244949 1066.47534 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.603 1 83.603 83.103 84.103 0 0 0 0 0.018499 1 44796 56.721 37.361 1 4324 1608 1606 1653 6787 6787 DDPALATYYGSLFK 14 1 0 Unmodified _DDPALATYYGSLFK_ 0 0 0 Q8IUF8;D6RCB6 Q8IUF8 Q8IUF8 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.8906 2 780.882664 1559.75077 NaN NaN NaN 0.17132 0.00013378 NaN NaN NaN NaN 117.53 0.41353 117.53 117.35 117.76 7.6294E-06 0 0 0 0.00072171 1 75217 77.062 60.838 1 NaN NaN 0 2649900 0 2649900 4325 1891 1607 1654 6788 6788 DDPALATYYGSLFK 14 1 0 Unmodified _DDPALATYYGSLFK_ 0 0 0 Q8IUF8;D6RCB6 Q8IUF8 Q8IUF8 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 785.3906 2 780.882664 1559.75077 NaN NaN NaN -0.041902 -3.272E-05 NaN NaN NaN NaN 129.09 0.37109 129.09 128.89 129.26 0 0 0 0 0.00021847 1 78002 84.479 67.454 1 NaN NaN 0 1930500 0 1930500 4326 1891 1607 1654 6789 6789 DDPALATYYGSLFK 14 1 0 Unmodified _DDPALATYYGSLFK_ 0 0 0 Q8IUF8;D6RCB6 Q8IUF8 Q8IUF8 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.8831 2 780.882664 1559.75077 69249.3 0.91358 0.0007134 -0.17117 -0.00013366 0.74241 0.00057974 781.383183294754 784.890237914209 128.94 0.48399 128.94 128.72 129.2 0 91 18 7 0 0 0 0.0022928 2 77050 49.081 43.235 1 1.2931 1.0121 0 3735700 1758600 1977100 4327 1891 1607 1654 6790;6791 6791 DDPENDNSELPTAK 14 1 0 Unmodified _DDPENDNSELPTAK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.8455 2 772.839182 1543.66381 70287.86 0.84415 0.00065239 -0.037633 -2.9084E-05 0.80652 0.00062331 772.839114936635 776.84615067058 37.01 0.52781 37.01 36.741 37.269 0 170 47 5 0 0 0 6.1626E-05 2 18725 91.313 85.773 1 0.67342 0.65963 0 21877000 11705000 10172000 4328 1954 1608 1655 6792;6793 6793 DDPENDNSELPTAK 14 1 0 Unmodified _DDPENDNSELPTAK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.8464 2 772.839182 1543.66381 70132.98 0.85828 0.00066331 -0.22843 -0.00017654 0.62985 0.00048678 772.839037932523 776.845667687487 36.299 0.52287 36.299 36.013 36.536 0 193 45 7 0 0 0 3.2662E-10 2 18582 124.12 113.89 1 0.63102 0.64961 0 25214000 14405000 10809000 4329 1954 1608 1655 6794;6795 6795 DDPENDNSELPTAK 14 1 0 Unmodified _DDPENDNSELPTAK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.8462 2 772.839182 1543.66381 69504.88 0.37997 0.00029365 -0.19218 -0.00014852 0.18779 0.00014513 772.839075320771 776.846114358657 42.633 0.64122 42.633 42.284 42.925 0 188 42 7 0 0 0 0.062848 1 19302 23.749 23.749 1 1.0365 0.81679 0 3885700 1745800 2139800 4330 1954 1608 1655 6796 6796 DDPSKPVHLTAFLGYK 16 2 0 Unmodified _DDPSKPVHLTAFLGYK_ 0 0 1 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.9916 3 596.649071 1786.92539 78388.84 0.91878 0.00054819 -0.57836 -0.00034508 0.34042 0.00020311 596.648755131116 601.991741953507 85.184 0.72026 85.184 84.806 85.526 0 212 60 5 0 0 0 3.4022E-05 2 52309 81.656 81.656 1 1.0388 1.1921 0 21901000 10868000 11033000 4331 1554;936 1609 1656 6797;6798 6797 DDPSKPVHLTAFLGYK 16 2 0 Unmodified _DDPSKPVHLTAFLGYK_ 0 0 1 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.9838 3 596.649071 1786.92539 77510.24 0.62279 0.00037159 -0.21168 -0.0001263 0.41111 0.00024529 596.648942499862 601.991721530461 97.685 1.1041 97.685 97.269 98.373 -7.6294E-06 519 67 11 0 0 0 8.7196E-07 2 54942 90.453 90.453 1 1.068 0.90577 0 56081000 26598000 29483000 4332 1554;936 1609 1656 6799;6800 6800 DDPSKPVHLTAFLGYK 16 2 0 Unmodified _DDPSKPVHLTAFLGYK_ 0 0 1 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.6494 3 596.649071 1786.92539 78047.34 0.45816 0.00027336 0.023624 1.4095E-05 0.48179 0.00028746 596.983420850868 601.991803108226 97.345 1.0569 97.345 96.954 98.011 7.6294E-06 401 57 11 0 0 0 0.00034882 2 53951 59.884 59.884 1 1.0172 0.86752 0 53459000 24745000 28714000 4333 1554;936 1609 1656 6801;6802 6802 DDPVTNLNNAFEVAEK 16 1 0 Unmodified _DDPVTNLNNAFEVAEK_ 0 0 0 A0A0S2Z3G9;O43707;B4DSX0;B4E337;K7EJH8 A0A0S2Z3G9 A0A0S2Z3G9 ACTN4 Alpha-actinin-4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.4318 2 888.425955 1774.83736 NaN NaN NaN -0.011003 -9.7754E-06 NaN NaN NaN NaN 105.32 0.47348 105.32 105.13 105.61 -7.6294E-06 0 0 0 0.049605 1 65104 34.685 25.029 1 NaN NaN 0 5868000 0 5868000 4334 548 1610 1657 6803 6803 DDPVTNLNNAFEVAEK 16 1 0 Unmodified _DDPVTNLNNAFEVAEK_ 0 0 0 A0A0S2Z3G9;O43707;B4DSX0;B4E337;K7EJH8 A0A0S2Z3G9 A0A0S2Z3G9 ACTN4 Alpha-actinin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.4332 2 888.425955 1774.83736 69921.93 0.67828 0.0006026 -0.090824 -8.069E-05 0.58746 0.00052191 888.425835715804 892.433517811462 104.85 0.41124 104.85 104.61 105.02 0 94 32 5 0 0 0 0.00015175 2 66448 64.224 58.501 1 2.1964 2.2323 0 9150600 3010000 6140600 4335 548 1610 1657 6804;6805 6804 DDQLTLTPMGR 11 0 1 Oxidation (M) _DDQLTLTPM(ox)GR_ DDQLTLTPM(1)GR DDQLTLTPM(50.29)GR 0 1 0 B4DIS6;Q9H6R0;I3L1L6;Q9NPV4;Q05BE5 B4DIS6 B4DIS6 DHX33;DKFZp762F2011 Putative ATP-dependent RNA helicase DHX33 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8123 2 631.805902 1261.59725 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.532 1 57.532 57.032 58.032 0 0 0 0 0.012443 1 33305 50.292 39.582 1 4336 983 1611 1658 6806 6806 783 DDSPLYIFDSSYGEHPK 17 1 0 Unmodified _DDSPLYIFDSSYGEHPK_ 0 0 0 B2WTI3;B2WTI4;K7EJU9;A0A0S2PZM4;Q6NYC1 B2WTI3 B2WTI3 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 989.4514 2 985.444345 1968.87414 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.36 1 102.36 101.86 102.86 0 0 0 0 0.0029442 1 63020 53.967 38.427 1 4337 543 1612 1659 6807 6807 DDSPLYIFDSSYGEHPK 17 1 0 Unmodified _DDSPLYIFDSSYGEHPK_ 0 0 0 B2WTI3;B2WTI4;K7EJU9;A0A0S2PZM4;Q6NYC1 B2WTI3 B2WTI3 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 989.4518 2 985.444345 1968.87414 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.51 1 102.51 102.01 103.01 -7.6294E-06 0 0 0 0.00050692 1 63125 62.088 46.549 1 4338 543 1612 1659 6808 6808 DDSPLYIFDSSYGEHPK 17 1 0 Unmodified _DDSPLYIFDSSYGEHPK_ 0 0 0 B2WTI3;B2WTI4;K7EJU9;A0A0S2PZM4;Q6NYC1 B2WTI3 B2WTI3 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.9534 2 985.444345 1968.87414 NaN NaN NaN -0.41135 -0.00040536 NaN NaN NaN NaN 101.44 0.24026 101.44 101.39 101.63 0 0 0 0 0.0043805 1 63910 51.463 38.036 1 NaN NaN 0 3477400 0 3477400 4339 543 1612 1659 6809 6809 DDTHYLLYIYDK 12 1 0 Unmodified _DDTHYLLYIYDK_ 0 0 0 Q01780;B4DKG8;B4DFE4 Q01780 Q01780 EXOSC10 Exosome component 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.8746 2 779.874839 1557.73512 NaN NaN NaN 0.31266 0.00024384 NaN NaN NaN NaN 96.97 0.26758 96.97 96.908 97.176 0 0 0 0 0.0011794 1 60663 80.979 68.023 1 NaN NaN 0 4705300 4705300 0 4340 1676 1613 1660 6810 6810 DDTHYLLYIYDK 12 1 0 Unmodified _DDTHYLLYIYDK_ 0 0 0 Q01780;B4DKG8;B4DFE4 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 779.8759 2 779.874839 1557.73512 67414.94 0.81086 0.00063237 -0.066455 -5.1827E-05 0.7444 0.00058054 779.874779503974 783.881657742902 110.13 0.57465 110.13 109.85 110.42 7.6294E-06 143 29 7 0 0 0 0.00062086 1 63657 83.045 79.705 1 1.346 1.0809 0 7753500 3680800 4072700 4341 1676 1613 1660 6811 6811 DDTHYLLYIYDK 12 1 0 Unmodified _DDTHYLLYIYDK_ 0 0 0 Q01780;B4DKG8;B4DFE4 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 779.8756 2 779.874839 1557.73512 69206.38 0.78651 0.00061338 -0.21076 -0.00016436 0.57575 0.00044901 779.874807815227 783.881586059708 110.05 0.69231 110.05 109.65 110.34 0 158 35 8 0 0 0 8.3904E-05 1 62601 112.13 112.13 1 1.2457 1.0143 0 7339200 3385200 3953900 4342 1676 1613 1660 6812 6812 DDVAPESGDTTVK 13 1 0 Unmodified _DDVAPESGDTTVK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3165 2 667.309529 1332.6045 74236.23 0.80079 0.00053437 -0.0070254 -4.6881E-06 0.79376 0.00052969 667.309602417604 671.316540920119 28.054 0.5983 28.054 27.746 28.344 0 308 40 10 0 0 0 0.00031877 2 12954 64.73 59.005 1 0.66281 0.78766 0 561440000 336880000 224560000 4343 1415 1614 1661 6813;6814 6813 DDVAPESGDTTVK 13 1 0 Unmodified _DDVAPESGDTTVK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3167 2 667.309529 1332.6045 74216.32 0.27279 0.00018204 0.03971 2.6499E-05 0.3125 0.00020853 667.309592620679 671.316597134077 27.518 0.9827 27.518 27.252 28.235 0 239 52 11 0 0 0 4.5595E-07 1 12692 112.13 104.48 1 0.64269 0.75757 0 645150000 387680000 257470000 4344 1415 1614 1661 6815 6815 DDVAPESGDTTVK 13 1 0 Unmodified _DDVAPESGDTTVK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.8198 2 667.309529 1332.6045 73740.95 0.37396 0.00024955 -0.048583 -3.242E-05 0.32538 0.00021713 667.309641944018 671.316491657541 31.882 1.4344 31.882 31.462 32.896 -1.9073E-06 386 74 11 0 0 0 0.0456 1 13438 30.205 27.354 1 0.72493 0.62842 0 125620000 75372000 50246000 4345 1415 1614 1661 6816 6816 DDVAPESGDTTVK 13 1 0 Unmodified _DDVAPESGDTTVK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.3096 2 667.309529 1332.6045 73232.83 0.54771 0.00036549 -0.11213 -7.4826E-05 0.43558 0.00029067 667.309534525677 671.316457922612 32.146 1.4177 32.146 31.522 32.939 0 388 72 10 0 0 0 0.04978 1 13480 29.299 28.184 1 0.67522 0.57549 0 90996000 55099000 35897000 4346 1415 1614 1661 6817 6817 DDVAQTDLLQIDPNFGSK 18 1 0 Unmodified _DDVAQTDLLQIDPNFGSK_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;A0A024R599;F5H0E2 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 992.4915 2 988.484002 1974.95345 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.56 1 114.56 114.06 115.06 0 0 0 0 0.023466 1 72730 41.644 25.754 1 4347 1072 1615 1662 6818 6818 DDVAQTDLLQIDPNFGSK 18 1 0 Unmodified _DDVAQTDLLQIDPNFGSK_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;A0A024R599;F5H0E2 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 992.4914 2 988.484002 1974.95345 61482.02 0.36828 0.00036404 -0.75043 -0.00074179 -0.38215 -0.00037775 988.483182520286 992.992236250264 125.5 0.39447 125.5 125.28 125.67 0 64 17 5 0 0 0 0.013768 1 74420 26.124 26.124 1 1.6406 1.3309 0 2816300 903710 1912600 4348 1072 1615 1662 6819 6819 DDVDVALLPTIVEK 14 1 0 Unmodified _DDVDVALLPTIVEK_ 0 0 0 Q8N2J1;B3KY25;B3KSC0;Q9Y5B6 Q8N2J1 Q8N2J1 PAXBP1 PAX3- and PAX7-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.9272 2 763.919246 1525.82394 71860.59 0.73203 0.00055921 -0.031246 -2.387E-05 0.70079 0.00053534 763.919392790126 767.926243689964 120.21 0.41051 120.21 120.03 120.44 0 101 28 5 0 0 0 0.00011813 1 77478 82.171 57.879 1 1.1435 1.133 0 8253600 3620500 4633100 4349 938 1616 1663 6820 6820 DDVIQICGPADGIR 14 0 1 Unmodified _DDVIQICGPADGIR_ 0 0 0 A0A024R120;Q12800;F8VWL0 A0A024R120 A0A024R120 TFCP2 Alpha-globin transcription factor CP2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.3762 2 764.874847 1527.73514 NaN NaN NaN -3.6845 -0.0028182 NaN NaN NaN NaN 90.908 0.35837 90.908 90.761 91.119 7.6294E-06 0 0 0 0.016025 2 54982 48.004 9.3698 1 NaN NaN 0 10555000 10555000 0 4350 66 1617 1664 6821;6822 6821 DDVSISVEEGK 11 1 0 Unmodified _DDVSISVEEGK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.2898 2 589.282783 1176.55101 NaN NaN NaN -0.29172 -0.00017191 NaN NaN NaN NaN 48.719 0.70633 48.719 48.322 49.028 0 0 0 0 0.0083912 1 26530 61.161 49.114 1 NaN NaN 0 40482000 0 40482000 4351 1454 1618 1665 6823 6823 DDVSISVEEGK 11 1 0 Unmodified _DDVSISVEEGK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.2913 2 589.282783 1176.55101 80544.05 0.34902 0.00020567 0.10328 6.0859E-05 0.4523 0.00026653 589.282958776445 593.289813240672 47.675 0.71027 47.675 47.269 47.979 0 153 48 6 0 0 0 7.8729E-05 2 26530 98.055 83.043 1 2.3856 2.685 0 70654000 24486000 46169000 4352 1454 1618 1665 6824;6825 6824 DEAEDLLGR 9 0 1 Unmodified _DEAEDLLGR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.2459 2 509.246003 1016.47745 84973.45 0.33921 0.00017274 0.1791 9.1204E-05 0.5183 0.00026394 509.245938230728 514.250082244815 61.967 0.61818 61.967 61.615 62.233 3.8147E-06 219 49 6 0 0 0 0.0018198 2 35403 80.438 66.442 1 0.68268 0.71283 0 38687000 23514000 15174000 4353 2148 1619 1666 6826;6827 6826 DEAEDLLGR 9 0 1 Unmodified _DEAEDLLGR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2455 2 509.246003 1016.47745 85082.53 0.26039 0.0001326 -0.46751 -0.00023808 -0.20713 -0.00010548 509.245726973043 514.249841557558 60.99 0.69481 60.99 60.537 61.231 0 234 63 5 0 0 0 0.0070864 1 35585 62.546 52.559 1 0.69099 0.7554 0 35789000 17398000 18392000 4354 2148 1619 1666 6828 6828 DEAEDYYDVITHPMDFQTVQNK 22 1 0 Oxidation (M) _DEAEDYYDVITHPM(ox)DFQTVQNK_ DEAEDYYDVITHPM(1)DFQTVQNK DEAEDYYDVITHPM(96.85)DFQTVQNK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.0646 3 892.058635 2673.15408 NaN NaN NaN 0.037021 3.3025E-05 NaN NaN NaN NaN 101.58 0.59351 101.58 101.3 101.89 0 0 0 0 3.6605E-18 1 62481 96.848 94.124 1 NaN NaN 0 20284000 0 20284000 4355 2103 1620 1667 6829 6829 1924 DEAEDYYDVITHPMDFQTVQNK 22 1 0 Oxidation (M) _DEAEDYYDVITHPM(ox)DFQTVQNK_ DEAEDYYDVITHPM(1)DFQTVQNK DEAEDYYDVITHPM(112.58)DFQTVQNK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.0648 3 892.058635 2673.15408 NaN NaN NaN -0.017463 -1.5578E-05 NaN NaN NaN NaN 101 0.67752 101 100.66 101.34 -7.6294E-06 0 0 0 1.0737E-23 1 63524 112.58 109.86 1 NaN NaN 0 29085000 0 29085000 4356 2103 1620 1667 6830 6830 1924 DEAEDYYDVITHPMDFQTVQNK 22 1 0 Oxidation (M) _DEAEDYYDVITHPM(ox)DFQTVQNK_ DEAEDYYDVITHPM(1)DFQTVQNK DEAEDYYDVITHPM(68.88)DFQTVQNK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 895.065 3 892.058635 2673.15408 NaN NaN NaN 0.040876 3.6464E-05 NaN NaN NaN NaN 113.75 0.78011 113.75 113.43 114.21 0 0 0 0 1.9331E-08 1 66314 68.88 65.957 1 NaN NaN 0 8866000 0 8866000 4357 2103 1620 1667 6831 6831 1924 DEAEDYYDVITHPMDFQTVQNK 22 1 0 Oxidation (M) _DEAEDYYDVITHPM(ox)DFQTVQNK_ DEAEDYYDVITHPM(1)DFQTVQNK DEAEDYYDVITHPM(49.77)DFQTVQNK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 895.0644 3 892.058635 2673.15408 NaN NaN NaN 0.41061 0.00036629 NaN NaN NaN NaN 113.82 0.74518 113.82 113.47 114.22 0 0 0 0 0.00021445 1 65421 49.768 49.238 1 NaN NaN 0 4453200 0 4453200 4358 2103 1620 1667 6832 6832 1924 DEALSDGDDLRDFPSDLK 18 1 1 Unmodified _DEALSDGDDLRDFPSDLK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0;D2CPK1;E7EUB5;D2CPJ8 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1004.4615 2 1004.46072 2006.90689 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.525 1 92.525 92.025 93.025 0 0 0 0 7.4131E-05 1 56074 61.375 46.174 1 4359 118 1621 1668 6833 6833 DEALSDGDDLRDFPSDLK 18 1 1 Unmodified _DEALSDGDDLRDFPSDLK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0;D2CPK1;E7EUB5;D2CPJ8 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.8543 3 669.976241 2006.90689 75513.49 0.65353 0.00043785 -0.32607 -0.00021846 0.32746 0.00021939 670.310239154094 676.31809393958 92.68 0.67162 92.68 92.304 92.975 0 225 62 5 0 0 0 0.03739 1 56037 26.412 26.412 1 0.53164 0.59982 0 22712000 12624000 10088000 4360 118 1621 1668 6834 6834 DEALSDGDDLRDFPSDLK 18 1 1 Unmodified _DEALSDGDDLRDFPSDLK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0;D2CPK1;E7EUB5;D2CPJ8 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1004.4608 2 1004.46072 2006.90689 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.911 1 91.911 91.411 92.411 0 0 0 0 0.00075179 1 56926 60.628 46.965 1 4361 118 1621 1668 6835 6835 DEAQNEGPATESEAPLK 17 1 0 Unmodified _DEAQNEGPATESEAPLK_ 0 0 0 B3KTJ9;Q8N163;E2PSM9;G3V119;H0YB24 B3KTJ9 B3KTJ9 CCAR2 Cell cycle and apoptosis regulator protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.4161 2 893.410502 1784.80645 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.673 1 43.673 43.173 44.173 0 0 0 0 0.00042874 1 23386 66.989 57.8 1 4362 943 1622 1669 6836 6836 DEAQNEGPATESEAPLK 17 1 0 Unmodified _DEAQNEGPATESEAPLK_ 0 0 0 B3KTJ9;Q8N163;E2PSM9;G3V119;H0YB24 B3KTJ9 B3KTJ9 CCAR2 Cell cycle and apoptosis regulator protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.4183 2 893.410502 1784.80645 65866.14 0.57614 0.00051473 0.051086 4.5641E-05 0.62722 0.00056037 893.410426587467 897.417613506242 42.903 0.36546 42.903 42.67 43.035 0 89 28 4 0 0 0 4.7587E-07 2 23158 120.87 120.87 1 1.1328 1.1434 0 13268000 6736900 6531300 4363 943 1622 1669 6837;6838 6838 DECNVVEVVAR 11 0 1 Unmodified _DECNVVEVVAR_ 0 0 0 O75607 O75607 O75607 NPM3 Nucleoplasmin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3113 2 645.311351 1288.60815 75655.21 0.72341 0.00046682 -0.27776 -0.00017924 0.44565 0.00028758 645.311372922855 650.315411052428 71.352 0.75069 71.352 71.078 71.828 0 287 65 6 0 0 0 0.00018263 2 41549 93.556 83.325 1 1.832 1.874 0 34806000 12544000 22262000 4364 1409 1623 1670 6839;6840 6839 DECNVVEVVAR 11 0 1 Unmodified _DECNVVEVVAR_ 0 0 0 O75607 O75607 O75607 NPM3 Nucleoplasmin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.3118 2 645.311351 1288.60815 74912.32 0.594 0.00038331 0.08312 5.3638E-05 0.67712 0.00043695 645.311610965035 650.315550433497 81.165 0.49575 81.165 80.939 81.434 0 135 31 6 0 0 0 0.00052001 1 43920 74.533 68.572 1 1.0501 0.87794 0 3573500 1853200 1720300 4365 1409 1623 1670 6841 6841 DEDISLTLNMNEEEVEK 17 1 0 Oxidation (M) _DEDISLTLNM(ox)NEEEVEK_ DEDISLTLNM(1)NEEEVEK DEDISLTLNM(137.84)NEEEVEK 0 1 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1016.9646 2 1012.45425 2022.89395 60558.74 0.25663 0.00025983 -0.01734 -1.7556E-05 0.23929 0.00024227 1012.45427676209 1016.4613440963 87.729 0.82507 87.729 87.373 88.198 0 490 77 8 0 0 0 3.5266E-20 4 53096 137.84 132.95 1 0.89163 1.0083 0 85222000 45214000 40008000 4366 167 1624 1671 6842;6843;6844;6845 6844 136 DEDISLTLNMNEEEVEK 17 1 0 Oxidation (M) _DEDISLTLNM(ox)NEEEVEK_ DEDISLTLNM(1)NEEEVEK DEDISLTLNM(138.02)NEEEVEK 0 1 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1012.9557 2 1012.45425 2022.89395 60376.69 0.19708 0.00019954 -0.095253 -9.6439E-05 0.10183 0.0001031 1012.4542200226 1016.46132192384 87.141 0.86275 87.141 86.784 87.647 0 419 71 8 0 0 0 2.8308E-25 3 53548 138.02 124.21 1 0.91599 1.0238 0 99710000 50461000 49249000 4367 167 1624 1671 6846;6847;6848 6847 136 DEDISLTLNMNEEEVEK 17 1 0 Oxidation (M) _DEDISLTLNM(ox)NEEEVEK_ DEDISLTLNM(1)NEEEVEK DEDISLTLNM(72.7)NEEEVEK 0 1 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1016.4623 2 1012.45425 2022.89395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.593 1 87.593 87.093 88.093 0 0 0 0 0.00014222 1 53989 72.705 58.244 1 4368 167 1624 1671 6849 6849 136 DEDISLTLNMNEEEVEK 17 1 0 Oxidation (M) _DEDISLTLNM(ox)NEEEVEK_ DEDISLTLNM(1)NEEEVEK DEDISLTLNM(45.26)NEEEVEK 0 1 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1012.4542 2 1012.45425 2022.89395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.652 1 87.652 87.152 88.152 0 0 0 0 0.0041255 1 54031 45.257 39.873 1 4369 167 1624 1671 6850 6850 136 DEDLFR 6 0 1 Unmodified _DEDLFR_ 0 0 0 A0A024R5H0;O75531;B2R4V4;A0A0C4DFW4;B2RC94;A0A024RDZ1;Q5JUR7 A0A024R5H0 A0A024R5H0 BANF1;TEX30;RP11-484I6.3 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed;Testis-expressed sequence 30 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.6875 2 397.687593 793.360633 95593.23 0.12587 5.0056E-05 0.19386 7.7098E-05 0.31973 0.00012715 397.687568415874 402.691643677872 51.396 0.44588 51.396 51.009 51.455 0 144 42 5 0 0 0 0.037313 1 28448 122.5 0 1 1.0789 1.1965 0 66871000 26196000 40675000 4370 181 1625 1672 6851 6851 DEENNPLETEYGLSVYK 17 1 0 Unmodified _DEENNPLETEYGLSVYK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1004.4713 2 1000.46019 1998.90583 62301.63 0.59445 0.00059472 0.18125 0.00018134 0.7757 0.00077606 1000.9616903981 1004.96881767102 103.11 0.55457 103.11 102.86 103.42 0 253 47 7 0 0 0 7.3436E-14 1 63605 124.86 121.81 1 1.3542 1.3342 0 19584000 7274800 12309000 4371 568 1626 1673 6852 6852 DEENNPLETEYGLSVYK 17 1 0 Unmodified _DEENNPLETEYGLSVYK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1004.9694 2 1000.46019 1998.90583 62391.7 0.49126 0.00049148 -0.64167 -0.00064197 -0.15042 -0.00015049 1000.9618289521 1004.46657114945 114.83 0.78166 114.83 114.59 115.37 0 131 34 7 0 0 0 0.0086685 2 67123 32.624 32.176 1 0.86615 0.69165 0 6948800 3507500 3441300 4372 568 1626 1673 6853;6854 6854 DEENNPLETEYGLSVYK 17 1 0 Unmodified _DEENNPLETEYGLSVYK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1000.9614 2 1000.46019 1998.90583 61735.13 0.33135 0.00033151 0.11061 0.00011066 0.44197 0.00044217 1000.96186793376 1004.96822813009 114.85 0.64359 114.85 114.6 115.24 0 122 29 6 0 0 0 0.0018973 2 66182 37.613 32.229 1 0.92551 0.75672 0 4774400 2400700 2373700 4373 568 1626 1673 6855;6856 6855 DEESGGGSNPFQHLEK 16 1 0 Unmodified _DEESGGGSNPFQHLEK_ 0 0 0 Q9Y678;D6RG17 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.8911 2 865.884455 1729.75436 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.146 1 52.146 51.646 52.646 0 0 0 0 0.0063121 1 29679 50.354 40.349 1 4374 2151 1627 1674 6857 6857 DEETGLCLLPLK 12 1 0 Unmodified _DEETGLCLLPLK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.3611 2 694.36051 1386.70647 NaN NaN NaN -0.8825 -0.00061277 NaN NaN NaN NaN 115.1 0.46404 115.1 114.87 115.33 0 0 0 0 6.5403E-14 1 73177 129.38 111.87 1 NaN NaN 0 7532500 7532500 0 4375 1486 1628 1675 6858 6858 DEETGLCLLPLK 12 1 0 Unmodified _DEETGLCLLPLK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.364 2 694.36051 1386.70647 72387.27 0.71158 0.00049409 0.11799 8.1929E-05 0.82957 0.00057602 694.360516802825 698.36843623262 114.66 0.52981 114.66 114.39 114.92 0 105 32 5 0 0 0 1.2956E-12 1 74538 129.38 129.38 1 0.43595 0.45657 0 10629000 6731400 3897800 4376 1486 1628 1675 6859 6859 DEFGELEGTRPNK 13 1 1 Unmodified _DEFGELEGTRPNK_ 0 0 1 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.3669 2 746.357345 1490.70014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.123 1 49.123 48.623 49.623 -3.8147E-06 0 0 0 0.0037161 1 26908 77.744 64.653 1 4377 2109 1629 1676 6860 6860 DEIALVLFGTDGTDNPLSGGDQYQNITVHR 30 0 1 Unmodified _DEIALVLFGTDGTDNPLSGGDQYQNITVHR_ 0 0 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1086.5352 3 1082.52849 3244.56365 57610.62 0.40079 0.00043387 0.14895 0.00016124 0.54974 0.00059511 1082.8630010696 1086.19910273801 126.36 0.76926 126.36 126.01 126.78 0 417 58 11 0 0 0 2.3973E-11 1 82103 57.688 57.688 1 0.32692 0.34649 0 41639000 29244000 12395000 4378 1476 1630 1677 6861 6861 DEIALVLFGTDGTDNPLSGGDQYQNITVHR 30 0 1 Unmodified _DEIALVLFGTDGTDNPLSGGDQYQNITVHR_ 0 0 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1082.8628 3 1082.52849 3244.56365 57479.98 0.59237 0.00064126 0.15607 0.00016895 0.74844 0.0008102 1082.86289611309 1086.19874448434 126.01 0.91379 126.01 125.67 126.59 0 346 56 12 0 0 0 3.2783E-07 3 84188 41.939 41.939 1 0.3567 0.39788 0 44078000 33779000 10299000 4379 1476 1630 1677 6862;6863;6864 6863 DEICNEMVEQMQQR 14 0 1 2 Oxidation (M) _DEICNEM(ox)VEQM(ox)QQR_ DEICNEM(1)VEQM(1)QQR DEICNEM(67.73)VEQM(67.73)QQR 0 2 0 O95235;H0YAC9 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 926.3813 2 921.376768 1840.73898 NaN NaN NaN -0.64795 -0.00059701 NaN NaN NaN NaN 27.86 0.16079 27.86 27.762 27.923 0 0 0 0 0.00035055 1 12955 67.726 58.038 1 NaN NaN 0 2478800 0 2478800 4380 1421 1631 1678 6865 6865 1112;1113 DEICNEMVEQMQQR 14 0 1 2 Oxidation (M) _DEICNEM(ox)VEQM(ox)QQR_ DEICNEM(1)VEQM(1)QQR DEICNEM(63.41)VEQM(63.41)QQR 0 2 0 O95235;H0YAC9 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.884 2 921.376768 1840.73898 63925.96 0.29547 0.00027224 0.76769 0.00070734 1.0632 0.00097957 921.879778577275 926.882350042032 27.349 0.17189 27.349 27.269 27.441 1.9073E-06 24 8 5 0 0 0 0.00028861 1 12630 63.408 48.436 1 0.49815 0.49948 0 6764900 2873600 3891300 4381 1421 1631 1678 6866 6866 1112;1113 DEIENSIVHR 10 0 1 Unmodified _DEIENSIVHR_ 0 0 0 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.3049 2 606.304384 1210.59421 78986.02 0.74435 0.00045131 0.3277 0.00019868 1.0721 0.00064999 606.304524886668 611.308763572211 41.025 0.70849 41.025 40.727 41.435 3.8147E-06 158 59 4 0 0 0 3.6565E-16 2 21469 154.56 138.02 1 0.99889 1.079 0 48612000 28262000 20350000 4382 925 1632 1679 6867;6868 6868 DEIENSIVHR 10 0 1 Unmodified _DEIENSIVHR_ 0 0 0 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3082 2 606.304384 1210.59421 77079.23 0.81346 0.0004932 -0.3641 -0.00022076 0.44935 0.00027244 606.30470619667 611.308498005364 39.946 0.79416 39.946 39.477 40.271 0 329 66 9 0 0 0 1.874E-08 1 21130 122.13 110.91 1 0.99249 1.147 0 69404000 41535000 27869000 4383 925 1632 1679 6869 6869 DEIENSIVHR 10 0 1 Unmodified _DEIENSIVHR_ 0 0 0 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.3038 2 606.304384 1210.59421 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.975 1 46.975 46.475 47.475 0 0 0 0 0.00030223 1 22724 76.679 63.1 1 4384 925 1632 1679 6870 6870 DEIFQVQWSPHNETILASSGTDR 23 0 1 Unmodified _DEIFQVQWSPHNETILASSGTDR_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.7557 3 877.420896 2629.24086 64500.28 0.55158 0.00048397 -0.070099 -6.1507E-05 0.48148 0.00042246 877.75532781333 881.091353105467 108.11 0.59877 108.11 107.85 108.45 0 217 45 7 0 0 0 3.6181E-23 2 67463 119.83 119.83 1 0.60858 0.64345 0 40742000 24496000 16246000 4385 1695 1633 1680 6871;6872 6872 DEIFQVQWSPHNETILASSGTDR 23 0 1 Unmodified _DEIFQVQWSPHNETILASSGTDR_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 881.0926 3 877.420896 2629.24086 65455.08 0.69497 0.00060978 0.42959 0.00037693 1.1246 0.00098671 878.089927880756 881.091498773872 118.63 0.43105 118.63 118.42 118.86 0 149 21 10 0 0 0 4.206E-09 2 70090 66.383 59.66 1 1.6797 1.3691 0 15214000 6273100 8940500 4386 1695 1633 1680 6873;6874 6873 DEIFQVQWSPHNETILASSGTDR 23 0 1 Unmodified _DEIFQVQWSPHNETILASSGTDR_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 881.0929 3 877.420896 2629.24086 65148.06 0.41828 0.00036701 0.70247 0.00061636 1.1207 0.00098337 877.756295153033 881.091935159506 118.41 0.43542 118.41 118.23 118.67 0 124 21 9 0 0 0 2.2707E-12 2 69069 90.534 83.659 1 1.64 1.3431 0 8968800 3363100 5605700 4387 1695 1633 1680 6875;6876 6876 DEILPTTPISEQK 13 1 0 Unmodified _DEILPTTPISEQK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.8859 2 735.887946 1469.76134 71131.05 0.64 0.00047097 -0.52084 -0.00038328 0.11916 8.7691E-05 735.887483141669 739.894872282223 83.964 1.0163 83.964 83.463 84.479 0 587 81 10 0 0 0 4.8124E-05 4 50058 96.89 96.89 1 1.13 1.3396 0 480940000 236630000 244310000 4388 1511 1634 1681 6877;6878;6879;6880 6878 DEILPTTPISEQK 13 1 0 Unmodified _DEILPTTPISEQK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8951 2 735.887946 1469.76134 71438.16 0.68142 0.00050145 -0.32229 -0.00023717 0.35913 0.00026428 735.887618555661 739.894845002307 83.076 1.1033 83.076 82.589 83.692 0 586 85 10 0 0 0 5.4124E-06 2 51024 105.86 105.86 1 1.1181 1.3173 0 547010000 257630000 289380000 4389 1511 1634 1681 6881;6882 6882 DEILPTTPISEQK 13 1 0 Unmodified _DEILPTTPISEQK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8973 2 735.887946 1469.76134 NaN NaN NaN 0.92816 0.00068302 NaN NaN NaN NaN 83.567 0.17494 83.567 83.494 83.669 0 0 0 0 0.0060647 2 51285 55.353 37.682 1 NaN NaN 0 7060000 0 7060000 4390 1511 1634 1681 6883;6884 6884 DEILPTTPISEQK 13 1 0 Unmodified _DEILPTTPISEQK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.8972 2 735.887946 1469.76134 70750.94 0.79839 0.00058753 -0.29214 -0.00021498 0.50626 0.00037255 735.887426106684 739.895087374969 95.403 1.1302 95.403 95.03 96.161 -7.6294E-06 482 78 9 0 0 0 0.00026779 2 53268 67.207 67.207 1 1.2188 0.99909 0 36373000 16199000 20174000 4391 1511 1634 1681 6885;6886 6885 DEILPTTPISEQK 13 1 0 Unmodified _DEILPTTPISEQK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.8965 2 735.887946 1469.76134 71227.15 0.5803 0.00042703 -0.50626 -0.00037255 0.074042 5.4487E-05 735.887183599271 739.894982101391 95.392 1.1261 95.392 95.019 96.145 0 476 78 9 0 0 0 0.00025711 4 52457 67.726 67.726 1 1.1695 0.97458 0 40715000 19202000 21513000 4392 1511 1634 1681 6887;6888;6889;6890 6889 DEKIEELEALLQEAR 15 1 1 Unmodified _DEKIEELEALLQEAR_ 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.314 3 595.979146 1784.91561 78774.8 0.93335 0.00055626 -0.26479 -0.00015781 0.66856 0.00039845 595.978971012816 601.986562300774 132.2 0.43735 132.2 132 132.43 -1.5259E-05 84 20 6 0 0 0 0.0014512 2 80347 42.913 38.879 1 1.4185 1.18 0 3611900 1146700 2465100 4393 1421 1635 1682 6891;6892 6892 DEKIEELEALLQEAR 15 1 1 Unmodified _DEKIEELEALLQEAR_ 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.9868 3 595.979146 1784.91561 79395.41 1.1133 0.00066353 0.0040048 2.3868E-06 1.1173 0.00066591 595.979211731681 601.986660613332 131.95 0.40503 131.95 131.75 132.16 0 81 18 6 0 0 0 0.022356 1 79216 23.635 19.803 1 1.2468 1.0474 0 4744600 1875100 2869500 4394 1421 1635 1682 6893 6893 DELADEIANSSGK 13 1 0 Unmodified _DELADEIANSSGK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.8146 2 674.814978 1347.6154 NaN NaN NaN -0.00393 -2.652E-06 NaN NaN NaN NaN 58.824 0.61281 58.824 58.605 59.218 0 0 0 0 3.9432E-05 2 33592 92.611 75.099 1 NaN NaN 0 11334000 11334000 0 4395 81 1636 1683 6894;6895 6895 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M) _DELHIVEAEAM(ox)NYEGSPIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAM(108.71)NYEGSPIK 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1085.5178 2 1081.00953 2160.0045 57771 0.19032 0.00020574 0.072572 7.8451E-05 0.2629 0.00028419 1081.51078082109 1085.5187366969 100.6 0.64877 100.6 100.34 100.99 0 336 46 10 0 0 0 1.3347E-12 2 61678 108.71 108.71 1 1.2683 1.4145 0 62041000 29192000 32848000 4396 559 1637 1684 6896;6897 6896 416 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M) _DELHIVEAEAM(ox)NYEGSPIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAM(137.44)NYEGSPIK 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.0149 3 721.008776 2160.0045 70817.52 0.83745 0.00060381 -0.042334 -3.0523E-05 0.79512 0.00057329 721.343466549669 724.014388008597 100.58 1.6646 100.58 99.706 101.37 0 760 134 13 0 0 0 2.483E-24 2 61759 137.44 137.44 1 1.4749 1.7403 0 354880000 139910000 214970000 4397 559 1637 1684 6898;6899 6898 416 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M) _DELHIVEAEAM(ox)NYEGSPIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAM(82.45)NYEGSPIK 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.0148 3 721.008776 2160.0045 70642.05 0.78627 0.00056691 -0.11493 -8.2869E-05 0.67133 0.00048404 721.343344220031 724.014379678613 99.566 0.67238 99.566 99.084 99.757 0 511 54 12 0 0 0 9.0135E-07 2 62172 82.449 82.449 1 1.523 1.7925 0 404540000 157560000 246980000 4398 559 1637 1684 6900;6901 6900 416 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M) _DELHIVEAEAM(ox)NYEGSPIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAM(115.68)NYEGSPIK 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1085.5182 2 1081.00953 2160.0045 57555.35 0.32246 0.00034858 -0.48053 -0.00051946 -0.15808 -0.00017088 1081.51062238657 1085.51788158124 100 0.59344 100 99.656 100.25 0 327 46 10 0 0 0 6.0708E-17 2 62750 115.68 115.68 1 1.2196 1.3736 0 58439000 24930000 33509000 4399 559 1637 1684 6902;6903 6902 416 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M) _DELHIVEAEAM(ox)NYEGSPIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAM(123.63)NYEGSPIK 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.3441 3 721.008776 2160.0045 70613.95 0.74844 0.00053963 -0.18985 -0.00013689 0.55859 0.00040275 721.343302322556 723.680137953409 99.972 0.84708 99.972 99.671 100.52 0 610 67 13 0 0 0 5.5401E-18 2 62763 123.63 123.63 1 1.4857 1.7483 0 391300000 157390000 233910000 4400 559 1637 1684 6904;6905 6905 416 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M) _DELHIVEAEAM(ox)NYEGSPIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAM(87.41)NYEGSPIK 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 724.0151 3 721.008776 2160.0045 70471.35 1.0371 0.00074775 -0.3412 -0.00024601 0.69589 0.00050175 721.343023778753 724.014129153118 112.78 0.42967 112.78 112.5 112.93 0 148 20 11 0 0 0 1.9432E-08 2 65543 87.411 87.411 1 0.35804 0.30022 0 52141000 38450000 13692000 4401 559 1637 1684 6906;6907 6907 416 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M) _DELHIVEAEAM(ox)NYEGSPIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAM(104.88)NYEGSPIK 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.6812 3 721.008776 2160.0045 70956.13 0.77521 0.00055893 -0.1285 -9.2651E-05 0.64671 0.00046628 721.343100236331 723.680058315269 112.69 0.39079 112.69 112.48 112.87 -7.6294E-06 141 18 10 0 0 0 1.3709E-12 2 64573 104.88 104.88 1 0.35815 0.29856 0 41053000 30421000 10632000 4402 559 1637 1684 6908;6909 6909 416 DELHIVEAEAMNYEGSPIK 19 1 0 Unmodified _DELHIVEAEAMNYEGSPIK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.6782 3 715.677138 2144.00958 72909.42 0.72128 0.0005162 0.1407 0.0001007 0.86199 0.0006169 716.011653274198 718.348682947778 108.08 0.87084 108.08 107.47 108.34 0 220 43 8 0 0 0 1.651E-06 2 67425 73.138 73.138 1 0.78469 0.77303 0 19611000 10374000 9236600 4403 559 1637 1685 6910;6911 6911 DELHIVEAEAMNYEGSPIK 19 1 0 Unmodified _DELHIVEAEAMNYEGSPIK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.35 3 715.677138 2144.00958 NaN NaN NaN -0.052785 -3.7777E-05 NaN NaN NaN NaN 107.47 0.48458 107.47 107.22 107.71 -7.6294E-06 0 0 0 0.00090981 1 68733 46.131 36.968 1 NaN NaN 0 7746200 0 7746200 4404 559 1637 1685 6912 6912 DELHIVEAEAMNYEGSPIK 19 1 0 Unmodified _DELHIVEAEAMNYEGSPIK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.3484 3 715.677138 2144.00958 70426.89 0.99579 0.00071266 -0.1969 -0.00014092 0.79889 0.00057175 715.67710723169 718.682697758597 119.24 0.46928 119.24 119 119.47 0 144 19 10 0 0 0 1.8865E-17 2 70505 96.805 96.805 1 0.70893 0.57709 0 31049000 18703000 12346000 4405 559 1637 1685 6913;6914 6913 DELHIVEAEAMNYEGSPIK 19 1 0 Unmodified _DELHIVEAEAMNYEGSPIK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 716.0128 3 715.677138 2144.00958 71334.16 0.81121 0.00058056 -0.10086 -7.2187E-05 0.71034 0.00050838 716.0115507882 718.348358329607 119.02 0.44955 119.02 118.83 119.28 0 105 16 9 0 0 0 1.3897E-12 2 69510 90.654 90.654 1 0.70921 0.57207 0 23248000 12353000 10895000 4406 559 1637 1685 6915;6916 6916 DELIHELK 8 1 0 Unmodified _DELIHELK_ 0 0 0 Q8N5A0;A0A087WUT6;O60841;B3KM86;D3DVI5 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.7722 2 498.771657 995.528761 85083.73 0.32346 0.00016133 -0.60034 -0.00029943 -0.27688 -0.0001381 498.771846807876 502.778850054824 47.412 1.3031 47.412 46.702 48.005 0 237 100 5 0 0 0 0.030551 1 26454 51.864 27.013 1 1.515 1.7068 0 59296000 17335000 41961000 4407 414 1638 1686 6917 6917 DELKPAVTQLLWER 14 1 1 Unmodified _DELKPAVTQLLWER_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.653 3 566.64555 1696.91482 82543.52 0.77172 0.00043729 -0.32332 -0.00018321 0.4484 0.00025409 566.645336128167 572.652772079301 106.56 0.6028 106.56 106.24 106.85 0 183 43 6 0 0 0 0.0022933 3 66131 36.928 30.543 1 0.77993 0.88833 0 24862000 14638000 10223000 4408 908 1639 1687 6918;6919;6920 6919 DELKPAVTQLLWER 14 1 1 Unmodified _DELKPAVTQLLWER_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.98 3 566.64555 1696.91482 80730.19 0.75198 0.00042611 -0.19268 -0.00010918 0.5593 0.00031693 566.979727926224 572.653002097562 105.7 0.57568 105.7 105.39 105.97 0 174 40 5 0 0 0 1.9119E-06 2 67129 100.45 100.45 1 0.83166 0.94748 0 19622000 10944000 8678200 4409 908 1639 1687 6921;6922 6922 DELKPAVTQLLWER 14 1 1 Unmodified _DELKPAVTQLLWER_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.6533 3 566.64555 1696.91482 79131.3 0.41127 0.00023304 -0.22631 -0.00012823 0.18496 0.00010481 566.979862450623 572.987357737152 117.12 0.68737 117.12 116.72 117.41 0 148 28 8 0 0 0 1.2323E-05 2 68939 79.81 69.471 1 1.3479 1.1654 0 14352000 5627100 8724500 4410 908 1639 1687 6923;6924 6923 DELKPAVTQLLWER 14 1 1 Unmodified _DELKPAVTQLLWER_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.6532 3 566.64555 1696.91482 79118.08 0.59716 0.00033838 -0.25433 -0.00014412 0.34283 0.00019426 566.979829631852 572.65307406819 116.92 0.69861 116.92 116.51 117.21 0 127 28 8 0 0 0 0.0004354 2 67811 41.014 38.808 1 1.4292 1.2064 0 9114800 3384000 5730800 4411 908 1639 1687 6925;6926 6925 DELLGEKPEVK 11 2 0 Unmodified _DELLGEKPEVK_ 0 0 1 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.8403 2 628.840268 1255.66598 77074.62 0.85289 0.00053633 -0.025481 -1.6024E-05 0.82741 0.00052031 628.840121159431 636.854391178767 45.309 0.69751 45.309 44.903 45.6 0 307 61 8 0 0 0 8.7364E-05 2 24250 106.4 106.4 1 0.66511 0.78513 0 64617000 37821000 26796000 4412 1091 1640 1688 6927;6928 6927 DELLGEKPEVK 11 2 0 Unmodified _DELLGEKPEVK_ 0 0 1 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.8403 2 628.840268 1255.66598 76957.05 0.83528 0.00052526 0.0026132 1.6433E-06 0.83789 0.0005269 628.840097735233 636.854570929019 44.228 0.64056 44.228 43.853 44.494 0 288 57 7 0 0 0 1.239E-11 2 24110 140.49 140.49 1 0.71736 0.83268 0 94591000 59006000 35584000 4413 1091 1640 1688 6929;6930 6930 DELLGEKPEVK 11 2 0 Unmodified _DELLGEKPEVK_ 0 0 1 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.8556 2 628.840268 1255.66598 78116.02 0.26676 0.00016775 0.59522 0.0003743 0.86197 0.00054204 628.840255078862 636.855167398445 52.021 0.79662 52.021 51.527 52.324 0 268 66 6 0 0 0 0.0023572 3 25593 78.556 78.556 1 0.82438 0.71192 0 4696400 2660600 2035800 4414 1091 1640 1688 6931;6932;6933 6931 DELLSEKPEVK 11 2 0 Unmodified _DELLSEKPEVK_ 0 0 1 B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4 B1AKN6 B1AKN6 NFIA Nuclear factor 1;Nuclear factor 1 A-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.8456 2 643.84555 1285.67655 76289.34 0.49634 0.00031957 0.29524 0.00019009 0.79159 0.00050966 643.845747069334 651.859598681078 46.021 0.5746 46.021 45.715 46.289 0 197 52 5 0 0 0 0.00042525 2 24800 98.048 75.308 1 0.70608 0.83367 0 43142000 23183000 19959000 4415 816 1641 1689 6934;6935 6935 DELLSEKPEVK 11 2 0 Unmodified _DELLSEKPEVK_ 0 0 1 B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4 B1AKN6 B1AKN6 NFIA Nuclear factor 1;Nuclear factor 1 A-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8603 2 643.84555 1285.67655 75347.34 0.82313 0.00052997 0.039862 2.5665E-05 0.86299 0.00055563 643.845633086887 651.859585264537 44.841 0.45207 44.841 44.601 45.053 0 146 34 6 0 0 0 0.00048147 1 24473 97.597 67.342 1 0.68184 0.78977 0 55534000 34342000 21191000 4416 816 1641 1689 6936 6936 DELLSEKPEVK 11 2 0 Unmodified _DELLSEKPEVK_ 0 0 1 B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4 B1AKN6 B1AKN6 NFIA Nuclear factor 1;Nuclear factor 1 A-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.8601 2 643.84555 1285.67655 77095.45 0.51795 0.00033348 0.071218 4.5853E-05 0.58917 0.00037933 643.845583045584 651.859774507684 52.84 0.526 52.84 52.599 53.125 3.8147E-06 188 41 7 0 0 0 0.0019926 1 26136 83.862 59.086 1 0.59834 0.51648 0 4921700 2786000 2135700 4417 816 1641 1689 6937 6937 DELPYTFAAPESYEELR 17 0 1 Unmodified _DELPYTFAAPESYEELR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1015.9738 2 1015.4731 2028.93165 61077.02 0.56056 0.00056924 -0.33764 -0.00034286 0.22293 0.00022638 1015.97396453327 1020.97806016576 114.04 0.61018 114.04 113.8 114.41 7.6294E-06 239 44 8 0 0 0 0.00016365 3 72251 53.448 45.582 1 1.1569 1.1736 0 27999000 13050000 14949000 4418 790 1642 1690 6938;6939;6940 6939 DELPYTFAAPESYEELR 17 0 1 Unmodified _DELPYTFAAPESYEELR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1015.4691 2 1015.4731 2028.93165 60724.45 0.13329 0.00013536 0.033754 3.4276E-05 0.16705 0.00016963 1015.97469331964 1020.47770972415 113.58 0.70273 113.58 113.35 114.06 0 219 50 8 0 0 0 8.7041E-05 1 73676 61.375 55.991 1 1.0535 1.136 0 26142000 10744000 15398000 4419 790 1642 1690 6941 6941 DELPYTFAAPESYEELR 17 0 1 Unmodified _DELPYTFAAPESYEELR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1020.9805 2 1015.4731 2028.93165 59843.99 0.48567 0.00049319 -0.12821 -0.00013019 0.35746 0.000363 1015.97463144517 1020.4767470907 124.98 0.86047 124.98 124.66 125.52 0 179 35 9 0 0 0 0.00018383 3 74880 51.359 46.645 1 1.4645 1.2046 0 17791000 7469000 10322000 4420 790 1642 1690 6942;6943;6944 6943 DELPYTFAAPESYEELR 17 0 1 Unmodified _DELPYTFAAPESYEELR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1020.4796 2 1015.4731 2028.93165 60023.92 0.44917 0.00045612 0.10746 0.00010912 0.55663 0.00056525 1015.47318697776 1020.47718882251 124.94 0.76888 124.94 124.65 125.42 0 192 34 9 0 0 0 0.017459 2 73884 26.969 22.168 1 1.4308 1.1869 0 15176000 7377100 7799100 4421 790 1642 1690 6945;6946 6945 DELTDLDQSNVTEETPEGEEHHPVADTENK 30 1 0 Unmodified _DELTDLDQSNVTEETPEGEEHHPVADTENK_ 0 0 0 Q63HR1;Q5VU21;D3DQ69 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1129.8341 3 1126.82911 3377.46551 59598.01 -0.3337 -0.00037602 0.30999 0.00034931 -0.023701 -2.6707E-05 1127.16316429525 1129.83508084199 67.028 0.38332 67.028 66.819 67.203 0 71 27 6 0 0 0 1.9891E-07 2 38669 44.931 44.931 1 2.5402 2.5781 0 13516000 4635700 8880100 4422 1832 1643 1691 6947;6948 6948 DELTDLDQSNVTEETPEGEEHHPVADTENK 30 1 0 Unmodified _DELTDLDQSNVTEETPEGEEHHPVADTENK_ 0 0 0 Q63HR1;Q5VU21;D3DQ69 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.6276 4 845.373654 3377.46551 66412.22 0.3344 0.0002827 -0.11171 -9.444E-05 0.22269 0.00018825 845.373771041611 847.627843096971 67.031 0.4619 67.031 66.806 67.268 0 159 33 8 0 0 0 8.427E-11 1 38762 58.858 58.858 1 1.8387 1.8009 0 21994000 6875900 15118000 4423 1832 1643 1691 6949 6949 DELTDLDQSNVTEETPEGEEHHPVADTENK 30 1 0 Unmodified _DELTDLDQSNVTEETPEGEEHHPVADTENK_ 0 0 0 Q63HR1;Q5VU21;D3DQ69 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.8775 4 845.373654 3377.46551 66408.13 0.44807 0.00037879 -0.51544 -0.00043574 -0.067367 -5.6951E-05 845.874395710537 847.877924784094 66.032 0.40109 66.032 65.845 66.246 0 182 34 8 0 0 0 5.0769E-11 1 38971 60.176 60.176 1 2.2432 2.259 0 27794000 7956600 19838000 4424 1832 1643 1691 6950 6950 DELTDLDQSNVTEETPEGEEHHPVADTENK 30 1 0 Unmodified _DELTDLDQSNVTEETPEGEEHHPVADTENK_ 0 0 0 Q63HR1;Q5VU21;D3DQ69 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1130.5015 3 1126.82911 3377.46551 NaN NaN NaN 0.048244 5.4363E-05 NaN NaN NaN NaN 66.062 0.36568 66.062 65.845 66.211 0 0 0 0 7.2711E-07 2 38991 46.695 42.864 1 NaN NaN 0 7467800 0 7467800 4425 1832 1643 1691 6951;6952 6952 DEMLQMIR 8 0 1 2 Oxidation (M) _DEM(ox)LQM(ox)IR_ DEM(1)LQM(1)IR DEM(74.42)LQM(74.42)IR 0 2 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.2509 2 534.246634 1066.47872 NaN NaN NaN -0.092767 -4.956E-05 NaN NaN NaN NaN 34.57 0.58364 34.57 34.374 34.957 0 0 0 0 0.0022641 1 17343 74.415 57.86 1 NaN NaN 0 5494400 0 5494400 4426 1391 1644 1692 6953 6953 1061;1062 DENFAATDAIPSNVLR 16 0 1 Unmodified _DENFAATDAIPSNVLR_ 0 0 0 Q99549;B3KS10 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.4323 2 866.928665 1731.84278 NaN NaN NaN 0.40725 0.00035306 NaN NaN NaN NaN 105.41 0.42812 105.41 105.21 105.64 0 0 0 0 0.0037348 1 65206 55.314 46.914 1 NaN NaN 0 5348100 5348100 0 4427 1994 1645 1693 6954 6954 DENLALYVENQFR 13 0 1 Unmodified _DENLALYVENQFR_ 0 0 0 A8K6Q8;P02786;G3V0E5 A8K6Q8 A8K6Q8 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 806.3947 2 805.894094 1609.77364 NaN NaN NaN -0.67358 -0.00054283 NaN NaN NaN NaN 127.8 0.30344 127.8 127.68 127.98 -7.6294E-06 0 0 0 0.053808 1 77106 50.354 43.328 1 NaN NaN 0 902890 902890 0 4428 761 1646 1694 6955 6955 DEPEDDGYFVPPK 13 1 0 Unmodified _DEPEDDGYFVPPK_ 0 0 0 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.334 2 754.333004 1506.65145 69717.78 0.70511 0.00053189 0.1385 0.00010448 0.84362 0.00063637 754.333084553279 758.340170893155 75.321 1.2578 75.321 74.774 76.032 0 736 105 10 0 0 0 5.4717E-05 4 44128 96.342 96.342 1 1.1301 1.2976 0 199140000 95691000 103450000 4429 1470 1647 1695 6956;6957;6958;6959 6956 DEPEDDGYFVPPK 13 1 0 Unmodified _DEPEDDGYFVPPK_ 0 0 0 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.3403 2 754.333004 1506.65145 70655.95 0.63948 0.00048238 0.12584 9.4926E-05 0.76532 0.0005773 754.333077663387 758.340171239117 74.574 1.456 74.574 73.828 75.284 0 858 126 10 0 0 0 2.8566E-13 4 44607 125.75 125.75 1 1.1228 1.3026 0 220410000 103450000 116960000 4430 1470 1647 1695 6960;6961;6962;6963 6961 DEPEDDGYFVPPK 13 1 0 Unmodified _DEPEDDGYFVPPK_ 0 0 0 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 754.3337 2 754.333004 1506.65145 70231.25 0.61561 0.00046437 0.21366 0.00016117 0.82927 0.00062554 754.333349740916 758.340240306446 85.512 1.1956 85.512 85.042 86.238 0 429 77 8 0 0 0 0.03805 1 46880 31.843 31.607 1 1.304 1.0126 0 12711000 5349800 7361300 4431 1470 1647 1695 6964 6964 DEPEDDGYFVPPK 13 1 0 Unmodified _DEPEDDGYFVPPK_ 0 0 0 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.3337 2 754.333004 1506.65145 71110.86 0.58054 0.00043792 0.38655 0.00029159 0.96709 0.00072951 754.333416436091 758.340342754993 85.89 1.1952 85.89 85.333 86.529 0 416 69 8 0 0 0 0.014051 1 46190 37.6 36.403 1 1.3248 1.0938 0 11389000 5196100 6192600 4432 1470 1647 1695 6965 6965 DEPEEELQK 9 1 0 Unmodified _DEPEEELQK_ 0 0 0 E7ETY2;B4DRA2;Q9UFD4;H0YA99;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.7566 2 558.756401 1115.49825 NaN NaN NaN 0.13766 7.6916E-05 NaN NaN NaN NaN 27.346 0.67731 27.346 27.031 27.708 0 0 0 0 0.0032865 1 12462 78.77 61.213 1 NaN NaN 0 37607000 37607000 0 4433 1712;1225 1648 1696 6966 6966 DEPEEELQK 9 1 0 Unmodified _DEPEEELQK_ 0 0 0 E7ETY2;B4DRA2;Q9UFD4;H0YA99;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.7636 2 558.756401 1115.49825 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.255 1 27.255 26.755 27.755 0 0 0 0 0.0043778 1 12503 69.105 30.867 1 4434 1712;1225 1648 1696 6967 6967 DEPEEELQK 9 1 0 Unmodified _DEPEEELQK_ 0 0 0 E7ETY2;B4DRA2;Q9UFD4;H0YA99;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.7564 2 558.756401 1115.49825 80993.41 0.96771 0.00054071 0.18114 0.00010122 1.1489 0.00064193 558.756562564618 562.764273638897 26.914 0.61034 26.914 26.54 27.15 0 92 28 7 0 0 0 0.0019479 1 12229 78.77 66.723 1 0.47526 0.48504 0 31283000 22784000 8498900 4435 1712;1225 1648 1696 6968 6968 DEPIHILNVAIK 12 1 0 Unmodified _DEPIHILNVAIK_ 0 0 0 A0A024R0Y2;B2ZZ90;Q13085;A2NX49 A0A024R0Y2 A0A024R0Y2 hCG_30204;ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.4009 2 681.393002 1360.77145 NaN NaN NaN -0.66568 -0.00045359 NaN NaN NaN NaN 100.46 0.30389 100.46 100.33 100.63 0 0 0 0 0.035332 1 61529 45.598 28.966 1 NaN NaN 0 4611500 0 4611500 4436 60 1649 1697 6969 6969 DEPTGEVLSLVGK 13 1 0 Unmodified _DEPTGEVLSLVGK_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3578 2 672.356282 1342.69801 74687.14 0.86855 0.00058397 0.081274 5.4645E-05 0.94982 0.00063862 672.356483525097 676.363401474674 103.15 0.75799 103.15 102.87 103.63 0 335 63 8 0 0 0 0.005864 1 63429 46.844 28.532 1 1.0003 1.1279 0 76447000 38119000 38328000 4437 1411 1650 1698 6970 6970 DEPTGEVLSLVGK 13 1 0 Unmodified _DEPTGEVLSLVGK_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 676.364 2 672.356282 1342.69801 74422.2 0.97773 0.00065738 -0.14605 -9.8197E-05 0.83168 0.00055918 672.356378090445 676.363331581676 102.71 0.71947 102.71 102.27 102.99 0 316 56 7 0 0 0 0.00037296 2 64635 62.166 41.466 1 0.96828 1.084 0 83138000 43352000 39785000 4438 1411 1650 1698 6971;6972 6972 DEPTGEVLSLVGK 13 1 0 Unmodified _DEPTGEVLSLVGK_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.357 2 672.356282 1342.69801 75481.17 0.82433 0.00055424 0.25711 0.00017287 1.0814 0.00072711 672.356695833862 676.363305041467 115.07 0.53006 115.07 114.84 115.37 -7.6294E-06 107 23 7 0 0 0 0.00075813 1 67325 60.598 42.286 1 1.1369 0.91329 0 7813900 3681900 4132000 4439 1411 1650 1698 6973 6973 DEPTGEVLSLVGK 13 1 0 Unmodified _DEPTGEVLSLVGK_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 676.3638 2 672.356282 1342.69801 75066.69 0.69082 0.00046448 0.090008 6.0517E-05 0.78083 0.000525 672.356568904231 676.363523801732 115.01 0.45436 115.01 114.81 115.26 0 97 21 6 0 0 0 0.0017989 1 66342 56.359 38.847 1 1.1109 0.9081 0 5566600 2592100 2974500 4440 1411 1650 1698 6974 6974 DEQLESLFQR 10 0 1 Unmodified _DEQLESLFQR_ 0 0 0 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8167 2 632.812042 1263.60953 77294.12 0.65093 0.00041192 -0.026517 -1.678E-05 0.62441 0.00039514 632.81154995411 637.816147036321 94.472 0.6991 94.472 94.197 94.896 0 173 63 4 0 0 0 0.00019263 2 57283 94.309 48.629 1 1.3358 1.3653 0 18929000 8333500 10595000 4441 1445 1651 1699 6975;6976 6975 DEQLESLFQR 10 0 1 Unmodified _DEQLESLFQR_ 0 0 0 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.8168 2 632.812042 1263.60953 77124.38 0.58234 0.00036851 -0.19088 -0.00012079 0.39146 0.00024772 632.811865199398 637.816181968245 93.764 0.65303 93.764 93.467 94.12 0 183 57 6 0 0 0 0.001324 2 58436 74.173 34.105 1 1.3957 1.453 0 22227000 9381500 12845000 4442 1445 1651 1699 6977;6978 6978 DEQLESLFQR 10 0 1 Unmodified _DEQLESLFQR_ 0 0 0 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.8129 2 632.812042 1263.60953 80928.13 0.64546 0.00040845 0.30934 0.00019575 0.95479 0.00060421 632.812044789727 637.816202150203 107.25 0.41148 107.25 107.07 107.48 0 90 29 4 0 0 0 0.010142 2 60589 53.756 27.372 1 0.58954 0.50818 0 1668500 966580 701960 4443 1445 1651 1699 6979;6980 6980 DEQPSGSVETGFEDK 15 1 0 Unmodified _DEQPSGSVETGFEDK_ 0 0 0 Q9NVV4;Q5T851 Q9NVV4 Q9NVV4 MTPAP Poly(A) RNA polymerase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.8601 2 812.852289 1623.69002 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.48 1 47.48 46.98 47.98 3.8147E-06 0 0 0 0.007883 1 26397 50.207 39.976 1 4444 2075 1652 1700 6981 6981 DEQQISAAVEK 11 1 0 Unmodified _DEQQISAAVEK_ 0 0 0 B2R923;A0A024R159;Q6YN16 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.3114 2 609.304049 1216.59355 NaN NaN NaN 1.0342 0.00063014 NaN NaN NaN NaN 36.65 0.4361 36.65 36.433 36.869 0 0 0 0 3.0387E-16 1 18801 137.46 117.32 1 NaN NaN 0 7588100 0 7588100 4445 70 1653 1701 6982 6982 DERQEDPYGPQTK 13 1 1 Unmodified _DERQEDPYGPQTK_ 0 0 1 Q6NUN2;A3F769;O15226 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.3585 2 781.857709 1561.70086 71854.33 0.72475 0.00056665 -0.086267 -6.7448E-05 0.63849 0.00049921 782.359396863537 790.868833895931 20.397 0.18258 20.397 20.302 20.485 0 16 5 5 0 0 0 0.0010796 1 6711 70.488 66.601 1 0.77982 0.86317 0 7674400 4262600 3411800 4446 655 1654 1702 6983 6983 DESSPYAAMLAAQDVAQR 18 0 1 Oxidation (M) _DESSPYAAM(ox)LAAQDVAQR_ DESSPYAAM(1)LAAQDVAQR DESSPYAAM(62.16)LAAQDVAQR 0 1 0 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 974.9517 2 969.946729 1937.87891 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.907 1 78.907 78.407 79.407 0 0 0 0 0.00013103 1 46758 62.162 44.353 1 4447 1638 1655 1703 6984 6984 1418 DESSPYAAMLAAQDVAQR 18 0 1 Oxidation (M) _DESSPYAAM(ox)LAAQDVAQR_ DESSPYAAM(1)LAAQDVAQR DESSPYAAM(69.72)LAAQDVAQR 0 1 0 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 969.9442 2 969.946729 1937.87891 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.474 1 78.474 77.974 78.974 0 0 0 0 1.8842E-05 1 47590 69.716 61.411 1 4448 1638 1655 1703 6985 6985 1418 DESSPYAAMLAAQDVAQR 18 0 1 Unmodified _DESSPYAAMLAAQDVAQR_ 0 0 0 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 967.458 2 961.949272 1921.88399 61914.29 0.5729 0.0005511 1.4025 0.0013491 1.9754 0.0019002 962.452314451212 967.457387489681 115.81 0.77269 115.81 115.48 116.25 0 73 34 6 0 0 0 0.0006664 1 67900 42.317 36.933 1 1.568 1.3342 0 2846800 951900 1894900 4449 1638 1655 1704 6986 6986 DETEFYLGK 9 1 0 Unmodified _DETEFYLGK_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.2586 2 551.258579 1100.50261 77519.01 0.52446 0.00028911 0.50417 0.00027793 1.0286 0.00056704 551.258721628036 555.266435513503 71.399 1.3337 71.399 70.726 72.06 0 522 111 8 0 0 0 0.00054206 2 41590 97.798 68.649 1 0.90606 1.0689 0 350140000 178190000 171950000 4450 1497 1656 1705 6987;6988 6988 DETEFYLGK 9 1 0 Unmodified _DETEFYLGK_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1109.568 1 1101.50988 1100.50261 57641.11 0.057706 6.3564E-05 0.41209 0.00045392 0.46979 0.00051748 1101.51009137038 1109.52417466319 71.419 0.6912 71.419 71.052 71.743 0 239 59 6 0 0 0 0.049099 1 41453 57.177 51.142 1 0.87669 0.92511 0 30914000 14439000 16475000 4451 1497 1656 1705 6989 6989 DETEFYLGK 9 1 0 Unmodified _DETEFYLGK_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.2596 2 551.258579 1100.50261 80482.82 0.50484 0.0002783 0.21053 0.00011605 0.71536 0.00039435 551.258725498041 555.265905962906 70.382 1.3536 70.382 69.872 71.225 0 462 106 10 0 0 0 0.00050627 2 41851 98.299 73.448 1 0.88462 1.0413 0 430530000 226620000 203900000 4452 1497 1656 1705 6990;6991 6990 DETEFYLGK 9 1 0 Unmodified _DETEFYLGK_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1109.0658 1 1101.50988 1100.50261 57417.8 0.03616 3.9831E-05 0.53205 0.00058606 0.56821 0.00062589 1101.51013221674 1109.52428213363 70.369 0.58531 70.369 70.039 70.624 0 203 47 6 0 0 0 0.053848 1 41791 53.166 53.166 1 0.94241 1.0296 0 40363000 20213000 20150000 4453 1497 1656 1705 6992 6992 DETEFYLGK 9 1 0 Unmodified _DETEFYLGK_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.2592 2 551.258579 1100.50261 80331.73 0.34066 0.00018779 0.1209 6.6648E-05 0.46156 0.00025444 551.258680193156 555.265683600143 81.053 1.0995 81.053 80.571 81.671 0 377 69 9 0 0 0 0.0074668 2 43892 61.962 45.489 1 0.82473 0.67886 0 40001000 22559000 17442000 4454 1497 1656 1705 6993;6994 6994 DETEFYLGK 9 1 0 Unmodified _DETEFYLGK_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.2595 2 551.258579 1100.50261 81129.86 0.60355 0.00033271 -0.12233 -6.7434E-05 0.48122 0.00026528 551.258607329153 555.265238668815 81.391 1.1286 81.391 80.915 82.044 0 336 65 9 0 0 0 0.0074258 2 43238 61.999 46.618 1 0.81408 0.6751 0 35366000 19068000 16298000 4455 1497 1656 1705 6995;6996 6996 DETIHIYDMK 10 1 0 Oxidation (M) _DETIHIYDM(ox)K_ DETIHIYDM(1)K DETIHIYDM(119.75)K 0 1 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8027 2 640.795003 1279.57545 76955.88 0.86237 0.0005526 -0.15952 -0.00010222 0.70285 0.00045038 641.296451807733 644.801971096981 44.754 0.79354 44.754 44.436 45.229 3.8147E-06 243 71 7 0 0 0 1.482E-08 2 23920 119.75 115.89 1 1.2846 1.3879 0 35204000 15723000 19481000 4456 580 1657 1706 6997;6998 6997 433 DETIHIYDMK 10 1 0 Oxidation (M) _DETIHIYDM(ox)K_ DETIHIYDM(1)K DETIHIYDM(154.85)K 0 1 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.7958 2 640.795003 1279.57545 76154.48 1.7442 0.0011177 -1.0098 -0.00064709 0.73442 0.00047061 640.794318335175 644.801392192824 43.71 0.53276 43.71 43.575 44.108 0 180 43 6 0 0 0 1.7112E-16 2 23805 154.85 144.56 1 1.6343 1.8349 0 75670000 22972000 52699000 4457 580 1657 1706 6999;7000 7000 433 DETIHIYDMK 10 1 0 Oxidation (M) _DETIHIYDM(ox)K_ DETIHIYDM(1)K DETIHIYDM(49.35)K 0 1 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.7952 2 640.795003 1279.57545 75708.16 0.30962 0.0001984 0.20058 0.00012853 0.5102 0.00032694 640.795095534985 644.80221433599 51.507 0.42909 51.507 51.266 51.695 0 165 31 7 0 0 0 0.0066476 2 25327 49.35 49.35 1 0.79818 0.63925 0 7298900 4217000 3081800 4458 580 1657 1706 7001;7002 7002 433 DETIHIYDMK 10 1 0 Oxidation (M) _DETIHIYDM(ox)K_ DETIHIYDM(1)K DETIHIYDM(74.38)K 0 1 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.8027 2 640.795003 1279.57545 74935.98 0.37708 0.00024163 0.10354 6.6348E-05 0.48062 0.00030798 640.79504964746 644.802308804472 51.886 0.59133 51.886 51.515 52.106 0 213 36 8 0 0 0 0.00061983 1 24968 74.376 70.805 1 0.80945 0.66339 0 5017100 2543900 2473300 4459 580 1657 1706 7003 7003 433 DETIHIYDMK 10 1 0 Unmodified _DETIHIYDMK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.8049 2 632.797546 1263.58054 78659.13 0.62453 0.0003952 -0.44908 -0.00028418 0.17545 0.00011102 632.79728699393 636.804410600929 74.562 0.57227 74.562 74.287 74.86 0 168 40 6 0 0 0 1.8131E-08 1 39577 122.26 122.26 1 1.4926 1.2214 0 2608800 1015400 1593400 4460 580 1657 1707 7004 7004 DETIHIYDMK 10 1 0 Unmodified _DETIHIYDMK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8047 2 632.797546 1263.58054 78856.7 0.50005 0.00031643 -0.17124 -0.00010836 0.32881 0.00020807 632.797245656682 636.804515650097 74.909 0.5443 74.909 74.645 75.189 0 132 33 6 0 0 0 0.0018846 1 39009 71.614 58.035 1 1.631 1.2936 0 3147500 1351200 1796300 4461 580 1657 1707 7005 7005 DETLTYAQVDR 11 0 1 Unmodified _DETLTYAQVDR_ 0 0 0 Q53GS2;O14975 Q53GS2 Q53GS2 SLC27A2 Very long-chain acyl-CoA synthetase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.3394 2 655.814781 1309.61501 74751.3 0.60514 0.00039686 -0.25945 -0.00017015 0.34568 0.0002267 655.814087115954 660.818796065325 56.569 0.46062 56.569 56.434 56.895 -3.8147E-06 97 40 4 0 0 0 0.025478 1 31844 72.643 72.643 1 0.85901 0.86564 0 7794200 4041700 3752500 4462 1370 1658 1708 7006 7006 DETLTYAQVDR 11 0 1 Unmodified _DETLTYAQVDR_ 0 0 0 Q53GS2;O14975 Q53GS2 Q53GS2 SLC27A2 Very long-chain acyl-CoA synthetase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.8184 2 655.814781 1309.61501 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.747 1 55.747 55.247 56.247 0 0 0 0 0.00058585 1 31987 74.162 61.635 1 4463 1370 1658 1708 7007 7007 DETNYGIPQR 10 0 1 Unmodified _DETNYGIPQR_ 0 0 0 E9KL35;P63244;D6RAC2;D6RHH4;D6R9Z1;D6R9L0;D6REE5;D6RFX4;B4DVD2;D6RBD0;D6RFZ9;D6RAU2;E9PD14;B4E0C3;D6RGK8;D6R909;B4DWC6 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.7836 2 596.783284 1191.55202 80559.77 0.82314 0.00049124 -0.33097 -0.00019752 0.49217 0.00029372 596.783015838999 601.787201725521 42.522 1.0635 42.522 42.126 43.189 0 363 83 5 0 0 0 5.0494E-10 2 22850 135.83 119.63 1 1.6703 1.9178 0 139040000 47133000 91909000 4464 1227 1659 1709 7008;7009 7009 DETNYGIPQR 10 0 1 Unmodified _DETNYGIPQR_ 0 0 0 E9KL35;P63244;D6RAC2;D6RHH4;D6R9Z1;D6R9L0;D6REE5;D6RFX4;B4DVD2;D6RBD0;D6RFZ9;D6RAU2;E9PD14;B4E0C3;D6RGK8;D6R909;B4DWC6 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.7829 2 596.783284 1191.55202 78926.6 0.69772 0.00041639 -0.33452 -0.00019964 0.3632 0.00021675 596.78298968844 601.787191625873 42.073 1.1395 42.073 41.488 42.628 0 504 99 8 0 0 0 9.0888E-09 2 22725 124.08 107.88 1 1.7891 2.04 0 138380000 51800000 86582000 4465 1227 1659 1709 7010;7011 7011 DETNYGIPQR 10 0 1 Unmodified _DETNYGIPQR_ 0 0 0 E9KL35;P63244;D6RAC2;D6RHH4;D6R9Z1;D6R9L0;D6REE5;D6RFX4;B4DVD2;D6RBD0;D6RFZ9;D6RAU2;E9PD14;B4E0C3;D6RGK8;D6R909;B4DWC6 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.7874 2 596.783284 1191.55202 80917.34 0.31389 0.00018733 -0.015029 -8.9692E-06 0.29887 0.00017836 596.783137778757 601.787281138518 49.746 1.6219 49.746 48.661 50.282 0 430 127 7 0 0 0 0.00013992 1 23876 96.034 79.831 1 2.1888 1.7854 0 9452700 3195100 6257600 4466 1227 1659 1709 7012 7012 DETSGLHLLPLPESAPALPTEEQVQR 26 0 1 Unmodified _DETSGLHLLPLPESAPALPTEEQVQR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.826 3 943.153927 2826.43995 NaN NaN NaN 0.11321 0.00010677 NaN NaN NaN NaN 119.33 0.35609 119.33 119.16 119.51 -7.6294E-06 0 0 0 0.034615 1 76720 24.637 17.276 1 NaN NaN 0 7945600 0 7945600 4467 397;1622 1660 1710 7013 7013 DETSGLHLLPLPESAPALPTEEQVQR 26 0 1 Unmodified _DETSGLHLLPLPESAPALPTEEQVQR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 946.4876 3 943.153927 2826.43995 63770.9 0.62443 0.00058893 0.26883 0.00025355 0.89326 0.00084248 943.823326104115 946.82437911025 118.89 0.32434 118.89 118.7 119.02 0 90 20 7 0 0 0 0.00013172 2 78275 35.179 35.179 1 1.604 1.5865 0 15280000 4663800 10616000 4468 397;1622 1660 1710 7014;7015 7015 DETVSDCSPHIANIGR 16 0 1 Unmodified _DETVSDCSPHIANIGR_ 0 0 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756;Q7L4N0 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 890.9112 2 885.907407 1769.80026 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.517 1 54.517 54.017 55.017 0 0 0 0 0.00079445 1 30666 73.632 65.119 1 4469 814 1661 1711 7016 7016 DETVSDCSPHIANIGR 16 0 1 Unmodified _DETVSDCSPHIANIGR_ 0 0 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756;Q7L4N0 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.9082 2 885.907407 1769.80026 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.549 1 54.549 54.049 55.049 0 0 0 0 0.0006373 1 30687 75.819 66.132 1 4470 814 1661 1711 7017 7017 DETVSDCSPHIANIGR 16 0 1 Unmodified _DETVSDCSPHIANIGR_ 0 0 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756;Q7L4N0 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.6354 3 590.940697 1769.80026 80635.43 0.66701 0.00039416 -0.30353 -0.00017937 0.36348 0.0002148 590.940473194801 594.277005121494 53.601 0.27964 53.601 53.429 53.709 -3.8147E-06 66 27 4 0 0 0 2.2768E-05 2 30637 81.632 79.332 1 1.0379 1.0292 0 12014000 4585300 7428500 4471 814 1661 1711 7018;7019 7019 DETVSDCSPHIANIGR 16 0 1 Unmodified _DETVSDCSPHIANIGR_ 0 0 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756;Q7L4N0 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 891.4131 2 885.907407 1769.80026 NaN NaN NaN -0.24528 -0.00021729 NaN NaN NaN NaN 53.541 0.29982 53.541 53.409 53.709 3.8147E-06 0 0 0 1.0507E-06 1 30616 89.805 80.372 1 NaN NaN 0 5895100 0 5895100 4472 814 1661 1711 7020 7020 DETVSDCSPHIANIGR 16 0 1 Unmodified _DETVSDCSPHIANIGR_ 0 0 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756;Q7L4N0 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.9068 2 885.907407 1769.80026 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.548 1 53.548 53.048 54.048 3.8147E-06 0 0 0 1.7025E-07 1 30614 101.71 94.331 1 4473 814 1661 1711 7021 7021 DEVASLLFDPK 11 1 0 Unmodified _DEVASLLFDPK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;Q6P664 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.3287 2 617.321711 1232.62887 77129.42 1.0371 0.00064024 -0.13298 -8.2094E-05 0.90415 0.00055815 617.3215355677 621.328714441664 110.41 0.70349 110.41 110.01 110.72 0 283 50 8 0 0 0 0.00026225 2 69093 90.108 90.108 1 0.92422 1.0482 0 95088000 50840000 44248000 4474 897 1662 1712 7022;7023 7023 DEVASLLFDPK 11 1 0 Unmodified _DEVASLLFDPK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;Q6P664 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.6797 2 617.321711 1232.62887 78760.74 0.60107 0.00037105 0.085105 5.2537E-05 0.68618 0.00042359 617.32179452772 621.328752721173 109.78 0.75096 109.78 109.48 110.23 0 251 47 8 0 0 0 0.021095 1 70832 84.17 84.17 1 0.92874 1.0383 0 53330000 24604000 28725000 4475 897 1662 1712 7024 7024 DEVASLLFDPK 11 1 0 Unmodified _DEVASLLFDPK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;Q6P664 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.3216 2 617.321711 1232.62887 78640.71 0.70052 0.00043244 0.36837 0.0002274 1.0689 0.00065985 617.321651696031 621.328788363929 121.48 0.91953 121.48 121.19 122.11 0 213 45 6 0 0 0 0.0014891 3 72527 67.113 67.113 1 1.2427 0.96283 0 13003000 5370000 7632500 4476 897 1662 1712 7025;7026;7027 7026 DEVASLLFDPK 11 1 0 Unmodified _DEVASLLFDPK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;Q6P664 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.3219 2 617.321711 1232.62887 79377.41 0.71176 0.00043938 0.32023 0.00019768 1.032 0.00063707 617.321668098079 621.328782991785 121.41 0.97954 121.41 121.11 122.09 0 248 49 7 0 0 0 0.00035027 4 71327 85.377 85.377 1 1.3099 1.0738 0 8787000 3407100 5380000 4477 897 1662 1712 7028;7029;7030;7031 7029 DEVLENVSPSCPK 13 1 0 Unmodified _DEVLENVSPSCPK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.8499 2 737.348131 1472.68171 NaN NaN NaN -0.10492 -7.7359E-05 NaN NaN NaN NaN 58.399 0.4358 58.399 58.159 58.595 3.8147E-06 0 0 0 0.00012866 2 33069 90.827 80.54 1 NaN NaN 0 2790200 2790200 0 + 4478 1146 1663 1713 7032;7033 7032 DEVLENVSPSCPK 13 1 0 Unmodified _DEVLENVSPSCPK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.3478 2 737.348131 1472.68171 NaN NaN NaN -0.36866 -0.00027183 NaN NaN NaN NaN 67.561 0.59824 67.561 67.301 67.899 0 0 0 0 0.0098248 1 35140 53.237 42.714 1 NaN NaN 0 1444900 1444900 0 + 4479 1146 1663 1713 7034 7034 DEVVAEHPDASGEEIEELLR 20 0 1 Unmodified _DEVVAEHPDASGEEIEELLR_ 0 0 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.0271 3 746.357122 2236.04954 79255.56 0.80364 0.0005998 -0.055514 -4.1433E-05 0.74812 0.00055837 746.692300811209 749.692861078588 105.13 0.2704 105.13 105.03 105.3 0 44 20 6 0 0 0 0.029105 3 65078 16.716 13.429 1 1.0995 1.1201 0 6977300 3378600 3598700 4480 1435 1664 1714 7035;7036;7037 7035 DEYTFSPGK 9 1 0 Unmodified _DEYTFSPGK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2377 2 522.237647 1042.46074 NaN NaN NaN 0.13532 7.0669E-05 NaN NaN NaN NaN 45.755 0.74222 45.755 45.419 46.162 0 0 0 0 0.0071088 1 24564 70.919 62.146 1 NaN NaN 0 14582000 14582000 0 4481 1679 1665 1715 7038 7038 DEYTFSPGK 9 1 0 Unmodified _DEYTFSPGK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.2446 2 522.237647 1042.46074 85324.63 0.46701 0.00024389 0.2746 0.00014341 0.74161 0.0003873 522.237675516414 526.244858414903 44.898 0.67735 44.898 44.566 45.244 0 180 54 4 0 0 0 0.0042156 2 24551 69.825 65.688 1 0.58014 0.62213 0 22922000 14292000 8629400 4482 1679 1665 1715 7039;7040 7040 DFAAEVVHPGDLK 13 1 0 Unmodified _DFAAEVVHPGDLK_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3632 2 699.356616 1396.69868 NaN NaN NaN 0.2891 0.00020219 NaN NaN NaN NaN 77.775 0.49144 77.775 77.522 78.013 7.6294E-06 0 0 0 3.2365E-21 1 45899 141.08 115.15 1 NaN NaN 0 16752000 0 16752000 4483 567 1666 1716 7041 7041 DFAAEVVHPGDLK 13 1 0 Unmodified _DFAAEVVHPGDLK_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.3638 2 699.356616 1396.69868 NaN NaN NaN 0.85959 0.00060116 NaN NaN NaN NaN 76.686 0.47146 76.686 76.4 76.871 0 0 0 0 6.6302E-48 1 46249 169.58 143.07 1 NaN NaN 0 25555000 0 25555000 4484 567 1666 1716 7042 7042 DFAAEVVHPGDLK 13 1 0 Unmodified _DFAAEVVHPGDLK_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 703.3655 2 699.356616 1396.69868 71118.68 0.82282 0.00057544 1.0436 0.00072987 1.8664 0.0013053 699.358286083431 703.364091233817 88.586 0.51418 88.586 88.355 88.869 0 138 31 7 0 0 0 0.00013561 2 48920 80.834 67.065 1 1.9763 1.5344 0 3562600 1067000 2495700 4485 567 1666 1716 7043;7044 7043 DFAAEVVHPGDLK 13 1 0 Unmodified _DFAAEVVHPGDLK_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.364 2 699.356616 1396.69868 NaN NaN NaN 0.93888 0.00065661 NaN NaN NaN NaN 88.553 0.38724 88.553 88.334 88.722 0 0 0 0 0.00034692 1 47979 86.463 72.693 1 NaN NaN 0 2250500 0 2250500 4486 567 1666 1716 7045 7045 DFAIDIIK 8 1 0 Unmodified _DFAIDIIK_ 0 0 0 V9HWB5;Q15181 V9HWB5 V9HWB5 HEL-S-66p;PPA1 Inorganic pyrophosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.7728 2 467.765843 933.517133 NaN NaN NaN -0.21891 -0.0001024 NaN NaN NaN NaN 107.4 0.6771 107.4 107.01 107.69 0 0 0 0 0.038104 1 68490 54.611 23.322 1 NaN NaN 0 4884300 0 4884300 4487 1755 1667 1717 7046 7046 DFAYGETDPLIR 12 0 1 Unmodified _DFAYGETDPLIR_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.8452 2 698.840799 1395.66705 NaN NaN NaN -0.41776 -0.00029195 NaN NaN NaN NaN 95.826 0.75822 95.826 95.339 96.097 7.6294E-06 0 0 0 0.0020261 1 58328 71.349 63.124 1 NaN NaN 0 6680700 0 6680700 4488 161 1668 1718 7047 7047 DFAYGETDPLIR 12 0 1 Unmodified _DFAYGETDPLIR_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.8412 2 698.840799 1395.66705 74689.08 0.82493 0.0005765 -0.012594 -8.8013E-06 0.81234 0.00056769 698.841417593063 703.844833194455 95.136 0.60268 95.136 94.747 95.349 0 124 53 4 0 0 0 0.013259 2 59144 44.425 42.395 1 1.3254 1.3197 0 11739000 4161000 7578100 4489 161 1668 1718 7048;7049 7048 DFCSQSCLSTYELK 14 1 0 Unmodified _DFCSQSCLSTYELK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 873.3833 2 869.376562 1736.73857 65762.28 0.46838 0.0004072 -1.2091 -0.0010512 -0.74074 -0.00064399 869.376343899786 873.382916694996 98.135 0.48272 98.135 97.849 98.332 7.6294E-06 106 30 6 0 0 0 0.042261 1 55309 27.664 27.664 1 1.6152 1.3493 0 1812200 586280 1225900 4490 1835 1669 1719 7050 7050 DFCSQSCLSTYELK 14 1 0 Unmodified _DFCSQSCLSTYELK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 873.8852 2 869.376562 1736.73857 NaN NaN NaN -0.25928 -0.00022541 NaN NaN NaN NaN 98.157 0.36813 98.157 97.958 98.326 0 0 0 0 0.024871 1 54492 42.426 38.894 1 NaN NaN 0 988030 0 988030 4491 1835 1669 1719 7051 7051 DFDGLVQVIIPQDESAASVK 20 1 0 Unmodified _DFDGLVQVIIPQDESAASVK_ 0 0 0 A8K4A8;A0A024R8Z9;Q6PI48 A8K4A8 A8K4A8 DARS2 Aspartate--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1070.0551 2 1066.04951 2130.08446 60539.59 0.74499 0.0007942 -0.17097 -0.00018227 0.57402 0.00061193 1066.5509702217 1070.0559256687 125.69 0.34955 125.69 125.52 125.87 0 86 22 5 0 0 0 7.5033E-06 1 81710 67.275 62.292 1 2.0191 2.0319 0 7276400 2093300 5183100 4492 266 1670 1720 7052 7052 DFDGLVQVIIPQDESAASVK 20 1 0 Unmodified _DFDGLVQVIIPQDESAASVK_ 0 0 0 A8K4A8;A0A024R8Z9;Q6PI48 A8K4A8 A8K4A8 DARS2 Aspartate--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1070.0568 2 1066.04951 2130.08446 62986.66 0.55967 0.00059663 -0.12347 -0.00013163 0.43619 0.000465 1066.04898423414 1070.5575254635 125.42 0.36394 125.42 125.19 125.56 0 91 25 6 0 0 0 0.0001128 1 83535 60.401 55.417 1 1.6579 1.6684 0 5461400 2086800 3374600 4493 266 1670 1720 7053 7053 DFDREVEIR 9 0 2 Unmodified _DFDREVEIR_ 0 0 1 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8026 2 589.793652 1177.57275 77447.57 0.79528 0.00046905 0.50543 0.0002981 1.3007 0.00076715 589.794031358513 599.801742795983 48.581 0.84068 48.581 48.128 48.969 0 287 54 8 0 0 0 0.004206 2 26408 105.2 81.04 1 0.90267 0.98491 0 154170000 81142000 73024000 4494 1789 1671 1721 7054;7055 7055 DFDREVEIR 9 0 2 Unmodified _DFDREVEIR_ 0 0 1 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8025 2 589.793652 1177.57275 78394.8 0.62754 0.00037012 0.089684 5.2895E-05 0.71722 0.00042301 589.793821817072 599.801789875667 47.22 0.63409 47.22 46.945 47.58 0 208 47 6 0 0 0 0.019048 1 26057 78.655 54.5 1 0.94623 1.1241 0 204380000 108930000 95447000 4495 1789 1671 1721 7056 7056 DFDREVEIR 9 0 2 Unmodified _DFDREVEIR_ 0 0 1 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2037 3 393.531527 1177.57275 96483.7 0.19657 7.7356E-05 0.36862 0.00014506 0.56519 0.00022242 393.531456583149 400.203609924769 47.218 0.41462 47.218 47.011 47.426 0 110 31 6 0 0 0 0.026085 1 26146 36.424 28.499 1 0.89576 1.0249 0 47150000 18100000 29050000 4496 1789 1671 1721 7057 7057 DFEASFIR 8 0 1 Unmodified _DFEASFIR_ 0 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.7432 2 492.742899 983.471246 86384.88 0.60303 0.00029714 0.052161 2.5702E-05 0.6552 0.00032284 492.742872225548 497.746906531022 86.386 0.55791 86.386 86.125 86.682 0 159 41 6 0 0 0 0.00068832 2 52039 128.86 82.198 1 0.86322 0.95376 0 56627000 27160000 29467000 4497 2125 1672 1722 7058;7059 7059 DFEASFIR 8 0 1 Unmodified _DFEASFIR_ 0 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.7429 2 492.742899 983.471246 86352.26 0.12991 6.4013E-05 0.33376 0.00016446 0.46367 0.00022847 492.742910559916 497.747145773854 85.443 0.41288 85.443 85.276 85.689 0 117 32 4 0 0 0 0.00088124 2 52557 126.2 81.483 1 0.91473 1.0532 0 53929000 26819000 27110000 4498 2125 1672 1722 7060;7061 7061 DFEASFIR 8 0 1 Unmodified _DFEASFIR_ 0 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.7432 2 492.742899 983.471246 NaN NaN NaN 0.18806 9.2668E-05 NaN NaN NaN NaN 98.162 0.66985 98.162 97.849 98.519 0 0 0 0 0.053513 1 55226 48.561 24.589 1 NaN NaN 0 2260600 2260600 0 4499 2125 1672 1722 7062 7062 DFEASFIR 8 0 1 Unmodified _DFEASFIR_ 0 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.7478 2 492.742899 983.471246 85356.31 0.26438 0.00013027 0.61124 0.00030118 0.87562 0.00043146 492.742708821193 497.747968651839 98.14 0.60588 98.14 97.851 98.457 -7.6294E-06 98 36 4 0 0 0 0.022432 1 54556 57.177 30.215 1 0.72543 0.6023 0 5849300 2493500 3355700 4500 2125 1672 1722 7063 7063 DFFQSYGNVVELR 13 0 1 Unmodified _DFFQSYGNVVELR_ 0 0 0 Q6FI03;Q5U0Q1;Q13283;B7Z8K4;Q6ZP53;Q53HH4;Q32P45 Q6FI03 Q6FI03 G3BP;DKFZp686L1159;G3BP1 Ras GTPase-activating protein-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.3903 2 787.385905 1572.75726 70972.07 0.44113 0.00034734 0.45179 0.00035574 0.89292 0.00070307 787.386040901663 792.390061318464 114.25 0.45496 114.25 114.08 114.53 0 101 32 6 0 0 0 0.00013091 1 72432 79.659 68.439 1 1.9775 1.9775 0 8900400 3670200 5230200 4501 1710 1673 1723 7064 7064 DFFQSYGNVVELR 13 0 1 Unmodified _DFFQSYGNVVELR_ 0 0 0 Q6FI03;Q5U0Q1;Q13283;B7Z8K4;Q6ZP53;Q53HH4;Q32P45 Q6FI03 Q6FI03 G3BP;DKFZp686L1159;G3BP1 Ras GTPase-activating protein-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.3901 2 787.385905 1572.75726 71276.29 0.60894 0.00047947 0.10466 8.2405E-05 0.7136 0.00056187 787.385294269776 792.389993300636 113.82 0.4919 113.82 113.56 114.06 0 139 35 6 0 0 0 0.00012689 2 73787 78.653 68.648 1 1.6777 1.6838 0 9209700 3350700 5859000 4502 1710 1673 1723 7065;7066 7065 DFFQSYGNVVELR 13 0 1 Unmodified _DFFQSYGNVVELR_ 0 0 0 Q6FI03;Q5U0Q1;Q13283;B7Z8K4;Q6ZP53;Q53HH4;Q32P45 Q6FI03 Q6FI03 G3BP;DKFZp686L1159;G3BP1 Ras GTPase-activating protein-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.3909 2 787.385905 1572.75726 66001.68 0.76303 0.0006008 0.49966 0.00039343 1.2627 0.00099422 787.887634154068 792.389878364446 125.17 0.4677 125.17 124.97 125.44 0 63 18 7 0 0 0 0.0027734 1 75143 52.391 46.897 1 2.1722 1.8281 0 3073800 1464500 1609300 4503 1710 1673 1723 7067 7067 DFGLLVFVR 9 0 1 Unmodified _DFGLLVFVR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.3076 2 533.30821 1064.60187 NaN NaN NaN -0.47589 -0.00025379 NaN NaN NaN NaN 129.85 0.37981 129.85 129.61 129.99 0 0 0 0 0.000818 1 84555 89.55 74.774 1 NaN NaN 0 2142000 2142000 0 4504 1665 1674 1724 7068 7068 DFGLLVFVR 9 0 1 Unmodified _DFGLLVFVR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.3121 2 533.30821 1064.60187 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.74 1 129.74 129.24 130.24 0 0 0 0 0.0055384 1 84557 67.981 43.826 1 4505 1665 1674 1724 7069 7069 DFGLLVFVR 9 0 1 Unmodified _DFGLLVFVR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.3083 2 533.30821 1064.60187 85208.13 0.61342 0.00032714 -0.13545 -7.2237E-05 0.47797 0.00025491 533.809468762398 538.312345530315 129.35 0.46376 129.35 129.21 129.67 0 85 25 5 0 0 0 0.00030602 2 86350 102.72 92.732 1 0.74977 0.74925 0 9035800 6814800 2221000 4506 1665 1674 1724 7070;7071 7071 DFGYVCETEFPAK 13 1 0 Unmodified _DFGYVCETEFPAK_ 0 0 0 Q96SH1;P05549;Q6VUC0 Q96SH1 Q96SH1 TFAP2A;TFAP2E Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.8466 2 781.845224 1561.6759 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.436 1 91.436 90.936 91.936 0 0 0 0 0.022534 1 55348 45.879 35.356 1 4507 1448 1675 1725 7072 7072 DFHLIQANK 9 1 0 Unmodified _DFHLIQANK_ 0 0 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.2908 2 543.290548 1084.56654 81896.3 0.72115 0.00039179 0.28478 0.00015472 1.0059 0.00054651 543.290625926365 547.297888113041 51.898 0.60531 51.898 51.548 52.153 0 183 48 6 0 0 0 8.3248E-08 1 28683 141.39 121.6 1 1.2894 1.3932 0 35230000 8549000 26681000 4508 1903 1676 1726 7073 7073 DFHLIQANK 9 1 0 Unmodified _DFHLIQANK_ 0 0 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.2906 2 543.290548 1084.56654 83039.96 0.55884 0.00030361 -0.54382 -0.00029545 0.015013 8.1566E-06 543.290266290731 547.297529476634 50.362 0.60592 50.362 49.939 50.545 0 188 54 6 0 0 0 0.00067697 1 28344 95.909 87.377 1 1.1744 1.1904 0 16580000 7972500 8607500 4509 1903 1676 1726 7074 7074 DFHLIQANK 9 1 0 Unmodified _DFHLIQANK_ 0 0 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.2913 2 543.290548 1084.56654 NaN NaN NaN 0.12625 6.8589E-05 NaN NaN NaN NaN 58.895 0.89754 58.895 58.229 59.127 0 0 0 0 0.015887 1 29295 62.107 49.119 1 NaN NaN 0 1527600 1527600 0 4510 1903 1676 1726 7075 7075 DFHVDEQTTVK 11 1 0 Unmodified _DFHVDEQTTVK_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.8179 2 659.817324 1317.62009 NaN NaN NaN 0.068162 4.4974E-05 NaN NaN NaN NaN 39.828 0.47944 39.828 39.657 40.137 -3.8147E-06 0 0 0 1.0595E-51 1 20708 183.03 144.73 1 NaN NaN 0 19372000 19372000 0 + 4511 1164 1677 1727 7076 7076 DFIDLTLSK 9 1 0 Unmodified _DFIDLTLSK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.2872 2 526.28714 1050.55973 84219.83 0.5095 0.00026814 -0.061791 -3.252E-05 0.44771 0.00023562 526.286968408352 530.294082641649 108.21 1.0107 108.21 107.79 108.8 0 373 74 7 0 0 0 0.0047154 3 67434 78.516 54.561 1 1.2057 1.3572 0 73065000 33115000 39950000 4512 1183 1678 1728 7077;7078;7079 7078 DFIDLTLSK 9 1 0 Unmodified _DFIDLTLSK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1060.1704 1 1051.567 1050.55973 60651.85 0.5139 0.0005404 0.24402 0.0002566 0.75792 0.000797 1051.56728958685 1059.58115156458 108.12 0.5182 108.12 108.04 108.56 -7.6294E-06 168 39 6 0 0 0 0.043737 1 67737 61.999 44.614 1 1.1534 1.2425 0 33680000 15905000 17775000 4513 1183 1678 1728 7080 7080 DFIDLTLSK 9 1 0 Unmodified _DFIDLTLSK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.2943 2 526.28714 1050.55973 84605.3 0.51053 0.00026868 -0.092564 -4.8715E-05 0.41796 0.00021997 526.28695594215 530.294076366604 107.64 1.0067 107.64 107.22 108.23 0 366 71 8 0 0 0 0.0021437 2 68581 81.642 62.128 1 1.2249 1.3768 0 73390000 32632000 40758000 4514 1183 1678 1728 7081;7082 7081 DFIDLTLSK 9 1 0 Unmodified _DFIDLTLSK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1060.1719 1 1051.567 1050.55973 60154.3 0.66379 0.00069802 -0.14154 -0.00014884 0.52225 0.00054918 1051.56686798772 1059.58091789455 107.62 0.67937 107.62 107.3 107.98 0 196 47 6 0 0 0 0.043771 1 68944 61.962 37.04 1 1.174 1.2223 0 24519000 11032000 13487000 4515 1183 1678 1728 7083 7083 DFIDLTLSK 9 1 0 Unmodified _DFIDLTLSK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.2947 2 526.28714 1050.55973 83811.25 0.63737 0.00033544 -0.079867 -4.2033E-05 0.5575 0.00029341 526.28701301586 530.294021326374 119.2 1.2811 119.2 118.83 120.11 0 212 57 8 0 0 0 0.028936 2 70334 46.462 39.871 1 1.6579 1.3457 0 26883000 10268000 16615000 4516 1183 1678 1728 7084;7085 7084 DFIDLTLSK 9 1 0 Unmodified _DFIDLTLSK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 526.2874 2 526.28714 1050.55973 84092.63 0.56993 0.00029995 0.015611 8.2159E-06 0.58554 0.00030816 526.287036252446 530.294072959623 119.02 0.89444 119.02 118.7 119.59 0 172 39 7 0 0 0 0.019135 1 69596 60.019 49.309 1 1.5352 1.231 0 19201000 7470400 11731000 4517 1183 1678 1728 7086 7086 DFIEDYVDILR 11 0 1 Unmodified _DFIEDYVDILR_ 0 0 0 D3DS96;Q9NRL2;Q59G54;A0A087WWN7 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.3553 2 699.351 1396.68745 NaN NaN NaN -0.15282 -0.00010687 NaN NaN NaN NaN 129.26 0.36853 129.26 129.13 129.5 0 0 0 0 4.8303E-08 1 86286 111.65 91.865 1 NaN NaN 0 9451700 0 9451700 4518 1187 1679 1729 7087 7087 DFIHDSLPPVLTDR 14 0 1 Unmodified _DFIHDSLPPVLTDR_ 0 0 0 A0A0A8K8C0;Q9H6W3 A0A0A8K8C0 A0A0A8K8C0 URLC2;NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.2829 3 542.2825 1623.82567 NaN NaN NaN -0.022875 -1.2405E-05 NaN NaN NaN NaN 109.55 0.44303 109.55 109.43 109.88 0 0 0 0 0.001534 1 68586 52.265 38.236 1 NaN NaN 0 3126200 3126200 0 4519 497 1680 1730 7088 7088 DFIHDSLPPVLTDR 14 0 1 Unmodified _DFIHDSLPPVLTDR_ 0 0 0 A0A0A8K8C0;Q9H6W3 A0A0A8K8C0 A0A0A8K8C0 URLC2;NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.2827 3 542.2825 1623.82567 84488.09 0.78702 0.00042679 -0.21 -0.00011388 0.57702 0.00031291 542.282251051617 545.618556694181 109.01 0.41369 109.01 108.8 109.21 7.6294E-06 104 31 5 0 0 0 0.00037766 2 69877 55.196 52.265 1 0.89868 0.89371 0 7661800 4065200 3596600 4520 497 1680 1730 7089;7090 7089 DFIILSCVR 9 0 1 Unmodified _DFIILSCVR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;B3KY55 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.8066 2 561.802434 1121.59032 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.04 1 109.04 108.54 109.54 0 0 0 0 0.041169 1 68194 49.418 16.577 1 4521 231 1681 1731 7091 7091 DFILPISDVR 10 0 1 Unmodified _DFILPISDVR_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24;Q4VXM1;Q4VXM0;Q8WX68 A0A087WVM4 A0A087WVM4 MTHFD1L;bA251O17.4 Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.334 2 587.826963 1173.63937 81281.42 0.87389 0.00051369 0.017101 1.0052E-05 0.89099 0.00052375 587.826972679721 593.33256618602 116.53 0.6011 116.53 116.19 116.79 0 144 41 5 0 0 0 0.0026779 2 74284 67.993 46.465 1 1.56 1.5939 0 9989500 2950200 7039300 4522 418 1682 1732 7092;7093 7092 DFILPISDVR 10 0 1 Unmodified _DFILPISDVR_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24;Q4VXM1;Q4VXM0;Q8WX68 A0A087WVM4 A0A087WVM4 MTHFD1L;bA251O17.4 Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.827 2 587.826963 1173.63937 81228.56 0.72149 0.00042411 0.25223 0.00014827 0.97372 0.00057238 587.827156173925 592.831057075351 116.03 0.5891 116.03 115.72 116.31 7.6294E-06 149 38 5 0 0 0 0.0071254 2 75733 57.859 45.566 1 1.806 1.8171 0 10924000 3104200 7819700 4523 418 1682 1732 7094;7095 7095 DFILPISDVR 10 0 1 Unmodified _DFILPISDVR_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24;Q4VXM1;Q4VXM0;Q8WX68 A0A087WVM4 A0A087WVM4 MTHFD1L;bA251O17.4 Monofunctional C1-tetrahydrofolate synthase, mitochondrial ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.828 2 587.826963 1173.63937 NaN NaN NaN -0.062926 -3.6989E-05 NaN NaN NaN NaN 127.85 0.50091 127.85 127.56 128.06 0 0 0 0 0.044232 1 77066 48.283 40.351 1 NaN NaN 0 838930 838930 0 4524 418 1682 1732 7096 7096 DFISVLR 7 0 1 Unmodified _DFISVLR_ 0 0 0 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.2458 2 425.245078 848.475603 92114.45 0.079723 3.3902E-05 0.63298 0.00026917 0.7127 0.00030307 425.245336477505 430.249200629308 96.337 1.1293 96.337 96.015 97.145 0 340 96 5 0 0 0 0.028171 1 60381 72.355 32.593 1 0.60554 0.69765 0 54312000 31588000 22724000 4525 2134 1683 1733 7097 7097 DFKPGDLIFAK 11 2 0 Unmodified _DFKPGDLIFAK_ 0 0 1 O75475;Q05CM9;Q8N4N4 O75475;Q8N4N4 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.8575 2 625.842613 1249.67067 74764.2 0.66203 0.00041432 -0.46938 -0.00029375 0.19265 0.00012057 625.841721177 633.856667558649 109.8 0.8336 109.8 109.5 110.34 0 288 43 11 0 0 0 0.0022814 1 63293 79.659 68.066 1 1.3069 1.1105 0 39180000 17454000 21726000 4526 1405;1908 1684 1734 7098 7098 DFLAGGIAAAISK 13 1 0 Unmodified _DFLAGGIAAAISK_ 0 0 0 Q6I9V5;Q59EI9;P12236 Q6I9V5 Q6I9V5 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.3525 2 617.34552 1232.67649 NaN NaN NaN -0.07672 -4.7363E-05 NaN NaN NaN NaN 112.9 0.37088 112.9 112.73 113.1 -7.6294E-06 0 0 0 0.039559 1 71520 41.399 29.909 1 NaN NaN 0 3363500 0 3363500 4527 1474 1685 1735 7099 7099 DFLAGGIAAAISK 13 1 0 Unmodified _DFLAGGIAAAISK_ 0 0 0 Q6I9V5;Q59EI9;P12236 Q6I9V5 Q6I9V5 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.3527 2 617.34552 1232.67649 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.3 1 112.3 111.8 112.8 0 0 0 0 0.0033135 1 72647 64.439 47.663 1 4528 1474 1685 1735 7100 7100 DFLAGGIAAAISK 13 1 0 Unmodified _DFLAGGIAAAISK_ 0 0 0 Q6I9V5;Q59EI9;P12236 Q6I9V5 Q6I9V5 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.353 2 617.34552 1232.67649 79525.3 0.64973 0.00040111 0.56547 0.00034909 1.2152 0.0007502 617.345917689687 621.352792402204 123.91 0.46524 123.91 123.64 124.1 0 62 17 5 0 0 0 0.048698 1 73248 29.534 28.045 1 0.79117 0.65624 0 1577000 936630 640380 4529 1474 1685 1735 7101 7101 DFLDSLGFSTR 11 0 1 Unmodified _DFLDSLGFSTR_ 0 0 0 Q53Y97;Q53FB7;A8K9A5;P04818 Q53Y97 Q53Y97 TYMS Thymidylate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.3128 2 629.309135 1256.60372 81847.23 1.13 0.00071113 0.41783 0.00026294 1.5479 0.00097408 629.310087650504 634.313130663465 119 0.53257 119 118.76 119.29 0 92 32 5 0 0 0 0.021359 1 76357 43.308 38.524 1 2.1103 2.1966 0 5304700 1911000 3393700 4530 782 1686 1736 7102 7102 DFLDSLGFSTR 11 0 1 Unmodified _DFLDSLGFSTR_ 0 0 0 Q53Y97;Q53FB7;A8K9A5;P04818 Q53Y97 Q53Y97 TYMS Thymidylate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3138 2 629.309135 1256.60372 77701.45 0.67471 0.0004246 -0.31623 -0.00019901 0.35848 0.00022559 629.30873284034 634.312999391731 118.65 0.4813 118.65 118.43 118.91 0 69 29 4 0 0 0 0.00022817 1 77971 91.584 82.721 1 3.405 3.5305 0 4613200 1180400 3432800 4531 782 1686 1736 7103 7103 DFLEAVNK 8 1 0 Unmodified _DFLEAVNK_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.2525 2 468.245275 934.475997 NaN NaN NaN -0.061697 -2.8889E-05 NaN NaN NaN NaN 68.223 0.70073 68.223 67.846 68.547 0 0 0 0 0.033237 1 39515 57.281 44.233 1 NaN NaN 0 7528600 0 7528600 4532 620 1687 1737 7104 7104 DFLEAVNK 8 1 0 Unmodified _DFLEAVNK_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.2523 2 468.245275 934.475997 92592.55 0.19724 9.2358E-05 -0.056351 -2.6386E-05 0.14089 6.5972E-05 468.245077769524 472.252347298388 67.24 0.6944 67.24 66.829 67.523 0 161 57 4 0 0 0 0.026448 1 39666 54.549 37.585 1 3.0402 3.1178 0 11788000 2912700 8874800 4533 620 1687 1737 7105 7105 DFLEEANR 8 0 1 Unmodified _DFLEEANR_ 0 0 0 O43159;E9PPP6 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.2404 2 497.235439 992.456324 88607.86 0.26821 0.00013336 0.20734 0.0001031 0.47555 0.00023646 497.235331140386 502.239782735999 50.559 0.52271 50.559 50.27 50.793 -3.8147E-06 139 47 4 0 0 0 0.008243 1 28562 79.469 45.465 1 1.1644 1.1674 0 17990000 7892200 10098000 4534 1380 1688 1738 7106 7106 DFLEEANR 8 0 1 Unmodified _DFLEEANR_ 0 0 0 O43159;E9PPP6 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.2355 2 497.235439 992.456324 88206.09 0.19038 9.4663E-05 -0.014681 -7.3001E-06 0.1757 8.7363E-05 497.235248961457 502.239752419479 58.744 0.51426 58.744 58.517 59.031 0 123 38 4 0 0 0 0.051374 1 29894 43.246 26.47 1 0.91355 0.79084 0 2596400 1291000 1305500 4535 1380 1688 1738 7107 7107 DFLIPIGK 8 1 0 Unmodified _DFLIPIGK_ 0 0 0 P11177;F8WF02;C9J634;Q59G68 P11177 P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.7711 2 451.770929 901.527304 95072.82 0.2119 9.573E-05 -0.20462 -9.244E-05 0.0072825 3.29E-06 451.770785860838 455.777938659147 108.79 0.60725 108.79 108.42 109.03 7.6294E-06 116 42 4 0 0 0 0.027969 1 69654 53.554 17.369 1 1.4996 1.5354 0 9389700 2862300 6527400 4536 1468 1689 1739 7108 7108 DFLLKPELLR 10 1 1 Unmodified _DFLLKPELLR_ 0 0 1 A0A024RCM3;Q13838;Q5STU3;F6WLT2;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;F6QYI9;A0A0G2JJL7;F6R6M7;K7EN69;Q7KYK3;K7ENP6;A0A0G2JHN7;K7EL56;K7EIL8;F6U6E2;F6S2B7;F6SXL5;B4DH55;B4DF34;O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;BAT1;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.386 2 622.374081 1242.73361 77978.21 0.64874 0.00040376 -0.11401 -7.0959E-05 0.53473 0.0003328 622.373873005993 631.385412312698 105.57 1.3825 105.57 104.89 106.28 0 339 105 5 0 0 0 0.0059189 2 65664 76.228 68.072 1 1.2973 1.5572 0 62740000 27443000 35297000 4537 1359;362 1690 1740 7109;7110 7110 DFLLKPELLR 10 1 1 Unmodified _DFLLKPELLR_ 0 0 1 A0A024RCM3;Q13838;Q5STU3;F6WLT2;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;F6QYI9;A0A0G2JJL7;F6R6M7;K7EN69;Q7KYK3;K7ENP6;A0A0G2JHN7;K7EL56;K7EIL8;F6U6E2;F6S2B7;F6SXL5;B4DH55;B4DF34;O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;BAT1;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.3741 2 622.374081 1242.73361 77610.22 0.76333 0.00047508 0.061442 3.824E-05 0.82477 0.00051332 622.373977422309 631.385356301971 104.72 1.115 104.72 104.04 105.15 0 333 89 5 0 0 0 0.016278 2 66146 66.435 66.435 1 1.061 1.2514 0 113520000 54694000 58827000 4538 1359;362 1690 1740 7111;7112 7112 DFLLKPELLR 10 1 1 Unmodified _DFLLKPELLR_ 0 0 1 A0A024RCM3;Q13838;Q5STU3;F6WLT2;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;F6QYI9;A0A0G2JJL7;F6R6M7;K7EN69;Q7KYK3;K7ENP6;A0A0G2JHN7;K7EL56;K7EIL8;F6U6E2;F6S2B7;F6SXL5;B4DH55;B4DF34;O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;BAT1;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.5935 3 415.251813 1242.73361 92867.41 0.44075 0.00018302 0.001912 7.9397E-07 0.44267 0.00018382 415.251561953465 421.259465411262 104.63 0.57043 104.63 104.31 104.88 0 113 43 5 0 0 0 0.013117 1 66175 34.773 34.773 1 1.3787 1.5811 0 23703000 8017500 15685000 4539 1359;362 1690 1740 7113 7113 DFLLKPELLR 10 1 1 Unmodified _DFLLKPELLR_ 0 0 1 A0A024RCM3;Q13838;Q5STU3;F6WLT2;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;F6QYI9;A0A0G2JJL7;F6R6M7;K7EN69;Q7KYK3;K7ENP6;A0A0G2JHN7;K7EL56;K7EIL8;F6U6E2;F6S2B7;F6SXL5;B4DH55;B4DF34;O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;BAT1;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.2516 3 415.251813 1242.73361 NaN NaN NaN -0.088121 -3.6592E-05 NaN NaN NaN NaN 104.72 0.3632 104.72 104.64 105 0 0 0 0 0.036591 1 66384 50.194 37.579 1 NaN NaN 0 9185300 9185300 0 4540 1359;362 1690 1740 7114 7114 DFLLNYPFSTSVK 13 1 0 Unmodified _DFLLNYPFSTSVK_ 0 0 0 B3KQQ9;O95084 B3KQQ9 B3KQQ9 PRSS23 Serine protease 23 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.4003 2 765.895574 1529.7766 NaN NaN NaN -2.0351 -0.0015587 NaN NaN NaN NaN 120.36 0.34142 120.36 120.19 120.53 0 0 0 0 0.045069 1 79458 40.715 22.403 1 NaN NaN 0 4225600 0 4225600 4541 929 1691 1741 7115 7115 DFLLTAR 7 0 1 Unmodified _DFLLTAR_ 0 0 0 A0A024R8P8;P63173;J3KT73;J3QL01;J3KSP2 A0A024R8P8 A0A024R8P8 RPL38 60S ribosomal protein L38 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.2372 2 418.237253 834.459953 94038.42 0.1869 7.8169E-05 0.084915 3.5514E-05 0.27182 0.00011368 418.237222511541 423.241296644739 78.751 1.3037 78.751 78.111 79.414 0 444 116 6 0 0 0 0.01383 2 46774 101.72 34.687 1 0.93338 1.0122 0 49818000 25116000 24703000 4542 253 1692 1742 7116;7117 7117 DFLLTAR 7 0 1 Unmodified _DFLLTAR_ 0 0 0 A0A024R8P8;P63173;J3KT73;J3QL01;J3KSP2 A0A024R8P8 A0A024R8P8 RPL38 60S ribosomal protein L38 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 423.2416 2 418.237253 834.459953 92105.9 -0.011988 -5.0137E-06 0.23231 9.716E-05 0.22032 9.2147E-05 418.237260821403 423.241380179367 88.665 1.2265 88.665 88.158 89.385 -7.6294E-06 319 77 6 0 0 0 0.041494 1 49007 58.981 6.298 1 1.2726 1.0896 0 6020900 2571100 3449800 4543 253 1692 1742 7118 7118 DFLMSGLPDLLK 12 1 0 Oxidation (M) _DFLM(ox)SGLPDLLK_ DFLM(1)SGLPDLLK DFLM(44.86)SGLPDLLK 0 1 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.8683 2 682.860146 1363.70574 NaN NaN NaN -0.0097168 -6.6352E-06 NaN NaN NaN NaN 126.25 0.46032 126.25 125.91 126.37 7.6294E-06 0 0 0 0.011627 1 82001 44.863 34.034 1 NaN NaN 0 2272800 0 2272800 4544 1984 1693 1743 7119 7119 1816 DFLMSGLPDLLK 12 1 0 Oxidation (M) _DFLM(ox)SGLPDLLK_ DFLM(1)SGLPDLLK DFLM(73.5)SGLPDLLK 0 1 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.8674 2 682.860146 1363.70574 NaN NaN NaN -0.20862 -0.00014246 NaN NaN NaN NaN 125.85 0.35725 125.85 125.66 126.02 0 0 0 0 0.00057234 3 83837 73.499 33.455 1 NaN NaN 0 2051700 0 2051700 4545 1984 1693 1743 7120;7121;7122 7120 1816 DFLQEVCLRPSADPIFEPR 19 0 2 Unmodified _DFLQEVCLRPSADPIFEPR_ 0 0 1 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9;H0YHL2 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.0513 3 763.715927 2288.12595 69763.77 0.70132 0.00053561 -0.29857 -0.00022802 0.40276 0.00030759 764.050474176254 770.386913089304 117.15 0.36475 117.15 117 117.36 0 119 21 9 0 0 0 1.5904E-05 1 76783 53.779 53.779 1 0.84046 0.8694 0 12630000 6173800 6455800 4546 1260 1694 1744 7123 7123 DFLQGSSCIAGIYNETTK 18 1 0 Unmodified _DFLQGSSCIAGIYNETTK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1002.4742 2 1002.47258 2002.93061 NaN NaN NaN -0.6492 -0.00065081 NaN NaN NaN NaN 107.28 0.25417 107.28 107.16 107.42 0 0 0 0 0.0077419 1 68435 42.209 34.105 1 NaN NaN 0 7457900 7457900 0 4547 1486 1695 1745 7124 7124 DFLQGSSCIAGIYNETTK 18 1 0 Unmodified _DFLQGSSCIAGIYNETTK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1002.972 2 1002.47258 2002.93061 NaN NaN NaN -0.37405 -0.00037498 NaN NaN NaN NaN 118.67 0.33653 118.67 118.52 118.86 0 0 0 0 0.04486 1 69231 30.308 24.924 1 NaN NaN 0 1486000 1486000 0 4548 1486 1695 1745 7125 7125 DFMIQGGDPTGTGR 14 0 1 Oxidation (M) _DFM(ox)IQGGDPTGTGR_ DFM(1)IQGGDPTGTGR DFM(40.71)IQGGDPTGTGR 0 1 0 A0A024RCX8;Q9Y3C6 A0A024RCX8 A0A024RCX8 PPIL1 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.3754 2 734.330273 1466.64599 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.926 1 57.926 57.426 58.426 3.8147E-06 0 0 0 0.021928 1 32791 40.715 30.191 1 4549 374 1696 1746 7126 7126 277 DFMYVSQDPK 10 1 0 Oxidation (M) _DFM(ox)YVSQDPK_ DFM(1)YVSQDPK DFM(53.77)YVSQDPK 0 1 0 P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.2771 2 623.276446 1244.53834 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.771 1 48.771 48.271 49.271 0 0 0 0 0.0093909 1 26657 53.775 47.672 1 4550 1615 1697 1747 7127 7127 1403 DFMYVSQDPK 10 1 0 Oxidation (M) _DFM(ox)YVSQDPK_ DFM(1)YVSQDPK DFM(47.85)YVSQDPK 0 1 0 P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.2839 2 623.276446 1244.53834 NaN NaN NaN -0.050358 -3.1387E-05 NaN NaN NaN NaN 47.528 0.50584 47.528 47.383 47.889 0 0 0 0 0.014288 1 26533 47.853 39.633 1 NaN NaN 0 9966900 0 9966900 4551 1615 1697 1747 7128 7128 1403 DFNHINVELSLLGK 14 1 0 Unmodified _DFNHINVELSLLGK_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.6227 3 533.622745 1597.84641 82898.1 0.77957 0.000416 -0.22797 -0.00012165 0.5516 0.00029435 533.622624003362 536.29398229436 111.82 0.84241 111.82 111.63 112.47 0 318 60 9 0 0 0 5.9069E-05 2 70386 65.472 61.631 1 0.88656 0.97927 0 56924000 28815000 28109000 4552 1537 1698 1748 7129;7130 7130 DFNHINVELSLLGK 14 1 0 Unmodified _DFNHINVELSLLGK_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.9312 2 799.93048 1597.84641 64330.68 1.1325 0.00090591 0.47918 0.00038331 1.6117 0.0012892 799.931049921673 803.938108068733 111.95 0.83937 111.95 111.6 112.44 0 324 60 9 0 0 0 2.7997E-21 3 70423 145.71 131.74 1 0.94274 1.077 0 181190000 92383000 88802000 4553 1537 1698 1748 7131;7132;7133 7132 DFNHINVELSLLGK 14 1 0 Unmodified _DFNHINVELSLLGK_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.9574 3 533.622745 1597.84641 82413.53 0.59392 0.00031693 -0.23887 -0.00012747 0.35505 0.00018946 533.622635178632 536.293949279347 111.24 0.72475 111.24 110.95 111.67 0 250 49 7 0 0 0 1.264E-06 3 71601 82.908 77.479 1 0.9203 1.0282 0 89877000 44860000 45017000 4554 1537 1698 1748 7134;7135;7136 7136 DFNHINVELSLLGK 14 1 0 Unmodified _DFNHINVELSLLGK_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.9312 2 799.93048 1597.84641 67223.16 0.79872 0.00063892 0.37128 0.000297 1.17 0.00093591 799.930893580126 803.937831556044 111.23 0.55145 111.23 110.93 111.49 7.6294E-06 335 38 11 0 0 0 5.1064E-15 2 71605 136.3 122.87 1 0.94604 1.0923 0 192490000 98468000 94024000 4555 1537 1698 1748 7137;7138 7138 DFNHINVELSLLGK 14 1 0 Unmodified _DFNHINVELSLLGK_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.9377 2 799.93048 1597.84641 68472.91 0.8941 0.00071521 0.27878 0.000223 1.1729 0.00093822 799.93021072759 803.937946622595 122.61 0.85818 122.61 122.16 123.02 0 192 42 8 0 0 0 1.9842E-14 2 73067 143.98 128.44 1 1.0664 0.92273 0 116040000 56872000 59166000 4556 1537 1698 1748 7139;7140 7139 DFNHINVELSLLGK 14 1 0 Unmodified _DFNHINVELSLLGK_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.9573 3 533.622745 1597.84641 81883.97 0.76819 0.00040992 0.074086 3.9534E-05 0.84228 0.00044946 533.622839657779 536.294224293715 122.61 0.54013 122.61 122.41 122.95 7.6294E-06 139 26 10 0 0 0 1.2247E-06 2 73114 81.632 77.791 1 1.0391 0.84729 0 32255000 15912000 16343000 4557 1537 1698 1748 7141;7142 7142 DFNHINVELSLLGK 14 1 0 Unmodified _DFNHINVELSLLGK_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.9319 2 799.93048 1597.84641 68659.94 0.86473 0.00069172 0.18401 0.0001472 1.0487 0.00083892 799.929739914222 803.937806330038 122.39 0.87291 122.39 121.99 122.86 -7.6294E-06 191 44 8 0 0 0 5.6119E-21 1 72089 140.82 140.82 1 1.0748 0.91166 0 66903000 31281000 35621000 4558 1537 1698 1748 7143 7143 DFNVPLSISR 10 0 1 Unmodified _DFNVPLSISR_ 0 0 0 Q9NR12;D6RAN1;D6RF83;H7BYK4;D6RH06 Q9NR12 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.315 2 574.308938 1146.60332 82286.89 0.78447 0.00045053 -0.050213 -2.8838E-05 0.73426 0.00042169 574.81089698017 579.313103045885 100.49 0.37608 100.49 100.29 100.66 0 91 30 5 0 0 0 0.009241 1 63175 54.982 46.75 1 1.5833 1.5991 0 10071000 4428300 5643100 4559 2064 1699 1749 7144 7144 DFPLSGYVELR 11 0 1 Unmodified _DFPLSGYVELR_ 0 0 0 Q9UF24;O75489;Q53FM7 Q9UF24 Q9UF24 DKFZp586K0821;NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3394 2 648.335153 1294.65575 77982.85 0.85634 0.00055519 -1.256 -0.00081432 -0.39967 -0.00025912 648.335491839946 653.338849920878 114.5 0.47826 114.5 114.25 114.73 7.6294E-06 99 31 5 0 0 0 0.029801 1 74524 39.001 30.42 1 1.6551 1.6929 0 5102000 2093000 3009000 4560 1406 1700 1750 7145 7145 DFQAISDVIGNK 12 1 0 Unmodified _DFQAISDVIGNK_ 0 0 0 Q9UKL0 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.8423 2 653.835517 1305.65648 72867.68 1.0674 0.00069792 -1.3001 -0.00085002 -0.23263 -0.0001521 654.336722956412 657.841004303944 98.597 0.7653 98.597 98.231 98.996 0 104 60 3 0 0 0 0.022387 1 60353 48.981 28.677 1 1.3196 1.3655 0 11140000 5099000 6041000 4561 2106 1701 1751 7146 7146 DFQAISDVIGNK 12 1 0 Unmodified _DFQAISDVIGNK_ 0 0 0 Q9UKL0 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.3372 2 653.835517 1305.65648 76067.63 0.86908 0.00056823 -2.662 -0.0017405 -1.793 -0.0011723 654.335581735471 657.840912806402 98.033 0.22035 98.033 97.959 98.179 -7.6294E-06 50 15 5 0 0 0 0.017556 1 61257 41.399 23.535 1 0.81554 0.82925 0 12587000 4909900 7676900 4562 2106 1701 1751 7147 7147 DFQAISDVIGNK 12 1 0 Unmodified _DFQAISDVIGNK_ 0 0 0 Q9UKL0 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.8434 2 653.835517 1305.65648 NaN NaN NaN -0.73256 -0.00047897 NaN NaN NaN NaN 98.197 0.34536 98.197 98.093 98.438 0 0 0 0 0.0012048 1 61377 80.706 42.978 1 NaN NaN 0 7500100 0 7500100 4563 2106 1701 1751 7148 7148 DFQAISDVIGNK 12 1 0 Unmodified _DFQAISDVIGNK_ 0 0 0 Q9UKL0 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.8364 2 653.835517 1305.65648 78210.79 0.70478 0.00046081 -0.89472 -0.000585 -0.18994 -0.00012419 653.835356029496 657.842310724075 111.12 0.5555 111.12 110.85 111.4 0 72 27 5 0 0 0 0.0030043 2 63390 57.149 43.796 1 1.4051 1.1653 0 1781100 890740 890380 4564 2106 1701 1751 7149;7150 7149 DFQQALYELSYHVIK 15 1 0 Unmodified _DFQQALYELSYHVIK_ 0 0 0 Q8NI27;F2Z2V2 Q8NI27 Q8NI27 THOC2 THO complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.3245 3 618.652593 1852.93595 81223.38 0.70086 0.00043359 -0.012303 -7.611E-06 0.68856 0.00042598 618.98732058081 621.323967126316 124.15 0.34134 124.15 123.94 124.28 7.6294E-06 70 23 5 0 0 0 0.0099921 1 80586 26.435 26.435 1 1.2165 1.2717 0 3961700 1566000 2395700 4565 1929 1702 1752 7151 7151 DFQSGQHVIVR 11 0 1 Unmodified _DFQSGQHVIVR_ 0 0 0 I3L0N3;B7Z5J7;P46459;B4DGR3;I3L0L3;I3L338;I3L4Q9 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.3405 2 643.336018 1284.65748 NaN NaN NaN -0.013256 -8.5281E-06 NaN NaN NaN NaN 38.63 0.38624 38.63 38.456 38.842 -3.8147E-06 0 0 0 1.2345E-11 1 19825 119.53 98.001 1 NaN NaN 0 10727000 0 10727000 4566 1096 1703 1753 7152 7152 DFSAPTLEDHFNK 13 1 0 Unmodified _DFSAPTLEDHFNK_ 0 0 0 P55081 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.8878 2 760.854438 1519.69432 75004.88 0.3371 0.00025648 0.014625 1.1128E-05 0.35172 0.00026761 761.356462651746 764.861229133641 74.746 0.27296 74.746 74.596 74.869 0 62 24 4 0 0 0 0.022792 1 43868 55.718 55.718 1 1.356 1.3758 0 6568500 3266100 3302400 4567 1614 1704 1754 7153 7153 DFSAPTLEDHFNK 13 1 0 Unmodified _DFSAPTLEDHFNK_ 0 0 0 P55081 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.8553 2 760.854438 1519.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.633 1 73.633 73.133 74.133 7.6294E-06 0 0 0 0.0055988 1 44219 57.174 41.602 1 4568 1614 1704 1754 7154 7154 DFSASYFSGEQEVTPSR 17 0 1 Unmodified _DFSASYFSGEQEVTPSR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 958.9797 2 953.92632 1905.83809 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.756 1 88.756 88.256 89.256 -7.6294E-06 0 0 0 0.0029442 1 53522 53.967 40.158 1 4569 1581 1705 1755 7155 7155 DFSASYFSGEQEVTPSR 17 0 1 Unmodified _DFSASYFSGEQEVTPSR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 958.9282 2 953.92632 1905.83809 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.778 1 88.778 88.278 89.278 0 0 0 0 0.00013319 1 53537 79.492 70.488 1 4570 1581 1705 1755 7156 7156 DFSASYFSGEQEVTPSR 17 0 1 Unmodified _DFSASYFSGEQEVTPSR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 953.9279 2 953.92632 1905.83809 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.223 1 88.223 87.723 88.723 0 0 0 0 0.00076245 1 54420 57.106 50.866 1 4571 1581 1705 1755 7157 7157 DFSASYFSGEQEVTPSR 17 0 1 Unmodified _DFSASYFSGEQEVTPSR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 958.9282 2 953.92632 1905.83809 63184.11 0.17939 0.00017112 -0.34358 -0.00032775 -0.1642 -0.00015663 953.925803026625 959.431499322958 101.31 0.49065 101.31 101.06 101.56 0 117 33 5 0 0 0 0.0017288 1 57331 38.799 38.799 1 1.6856 1.464 0 2284200 1195200 1089000 4572 1581 1705 1755 7158 7158 DFSDITKK 8 2 0 Unmodified _DFSDITKK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 477.2505 2 477.250557 952.486562 88127.95 -0.047159 -2.2507E-05 0.21412 0.00010219 0.16696 7.9682E-05 477.250387356629 485.264771935835 32.783 0.3856 32.783 32.532 32.918 0 65 18 5 0 0 0 0.051171 1 14213 51.864 21.679 1 1.2918 1.1168 0 4186400 1785400 2401000 4573 2065 1706 1756 7159 7159 DFSDITKK 8 2 0 Unmodified _DFSDITKK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.265 2 477.250557 952.486562 87780.3 0.24772 0.00011823 0.11523 5.4992E-05 0.36295 0.00017322 477.250375558334 485.264834651294 32.795 0.34348 32.795 32.578 32.921 0 50 14 6 0 0 0 0.045786 1 13723 53.968 18.088 1 1.2729 1.0977 0 3124000 1396400 1727600 4574 2065 1706 1756 7160 7160 DFSNSPLHR 9 0 1 Unmodified _DFSNSPLHR_ 0 0 0 A0A024R163;O95758 A0A024R163 A0A024R163 ROD1;PTBP3 Polypyrimidine tract-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.7668 2 536.762155 1071.50976 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.578 1 30.578 30.078 31.078 0 0 0 0 7.1625E-06 1 15014 113.26 76.235 1 4575 71 1707 1757 7161 7161 DFSYNYFGFK 10 1 0 Unmodified _DFSYNYFGFK_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.2963 2 644.287671 1286.56079 79840.75 1.1222 0.00072305 0.60054 0.00038692 1.7228 0.00111 644.287798870666 648.295071029068 110.25 0.56668 110.25 110.06 110.62 0 125 40 5 0 0 0 0.0019359 2 69326 71.379 55.217 1 3.9849 4.1543 0 12275000 3263100 9011900 4576 1014 1708 1758 7162;7163 7163 DFSYNYFGFK 10 1 0 Unmodified _DFSYNYFGFK_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.2964 2 644.287671 1286.56079 80220.07 0.89586 0.00057719 0.29118 0.00018761 1.187 0.0007648 644.287792240594 648.294966998361 109.78 0.50774 109.78 109.51 110.02 0 116 33 5 0 0 0 0.0019093 1 70419 71.501 53.682 1 3.6992 3.8372 0 11249000 3156600 8092000 4577 1014 1708 1758 7164 7164 DFTATFGPLDSLNTR 15 0 1 Unmodified _DFTATFGPLDSLNTR_ 0 0 0 A0A024R5C5;P11498;E9PS68 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.9079 2 827.907202 1653.79985 68309.16 0.80592 0.00066723 -0.016853 -1.3952E-05 0.78907 0.00065328 827.907173645908 832.910869058323 116.8 0.47396 116.8 116.56 117.03 0 115 31 6 0 0 0 0.00022046 1 74770 64.439 64.439 1 1.7264 1.7406 0 9471900 3170600 6301300 4578 176 1709 1759 7165 7165 DFTATFGPLDSLNTR 15 0 1 Unmodified _DFTATFGPLDSLNTR_ 0 0 0 A0A024R5C5;P11498;E9PS68 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.9068 2 827.907202 1653.79985 69375.13 0.8817 0.00072997 -0.3635 -0.00030095 0.5182 0.00042902 827.907369304554 832.910907092013 116.36 0.50079 116.36 116.13 116.63 0 118 31 5 0 0 0 0.00022163 1 76149 66.262 60.022 1 1.9314 1.9516 0 9921600 3149500 6772100 4579 176 1709 1759 7166 7166 DFTATFGPLDSLNTR 15 0 1 Unmodified _DFTATFGPLDSLNTR_ 0 0 0 A0A024R5C5;P11498;E9PS68 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 828.4101 2 827.907202 1653.79985 68620.67 1.1174 0.00092511 -0.79402 -0.00065737 0.32339 0.00026773 827.90708313502 832.910246762101 128.05 0.35336 128.05 127.83 128.18 0 48 13 5 0 0 0 0.027554 1 77282 28.327 28.037 1 0.81927 0.72183 0 1416400 593950 822470 4580 176 1709 1759 7167 7167 DFTDIQQDFLPWK 13 1 0 Unmodified _DFTDIQQDFLPWK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.4098 2 826.901388 1651.78822 67500.98 0.62008 0.00051274 0.064454 5.3297E-05 0.68453 0.00056604 827.403051471865 831.409578699345 128.4 0.51392 128.4 128.14 128.65 0 215 36 8 0 0 0 2.3839E-13 2 83683 127.76 120.64 1 0.64581 0.67255 0 11621000 7250700 4370100 4581 1223 1710 1760 7168;7169 7169 DFTDIQQDFLPWK 13 1 0 Unmodified _DFTDIQQDFLPWK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.903 2 826.901388 1651.78822 68001.36 1.1141 0.00092124 -0.14175 -0.00011721 0.97234 0.00080403 826.90132402453 830.908510219658 128.11 0.54263 128.11 127.83 128.37 0 180 32 8 0 0 0 3.3404E-09 2 85467 121.9 114.14 1 0.67537 0.67419 0 14318000 8644700 5673800 4582 1223 1710 1760 7170;7171 7170 DFTDLIVINEDR 12 0 1 Unmodified _DFTDLIVINEDR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.3688 2 725.364638 1448.71472 73057.66 0.78462 0.00056913 -0.49272 -0.0003574 0.29189 0.00021173 725.363749068004 730.368836024641 116.7 0.44608 116.7 116.51 116.96 7.6294E-06 90 29 4 0 0 0 1.6998E-05 1 74514 104.79 94.037 1 1.0663 1.0678 0 9008100 4664900 4343200 4583 2048 1711 1761 7172 7172 DFTDLIVINEDR 12 0 1 Unmodified _DFTDLIVINEDR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3692 2 725.364638 1448.71472 72016.43 0.78676 0.00057069 0.1657 0.00012019 0.95246 0.00069088 725.363866903286 730.369310757437 116.32 0.45435 116.32 116.08 116.53 0 124 28 6 0 0 0 7.0704E-06 2 75955 109.42 94.159 1 0.99979 1.0092 0 10257000 5756200 4500800 4584 2048 1711 1761 7173;7174 7173 DFTDLIVINEDR 12 0 1 Unmodified _DFTDLIVINEDR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.3691 2 725.364638 1448.71472 72406.13 0.98757 0.00071635 -0.24309 -0.00017633 0.74447 0.00054001 725.364034310765 730.368547917273 127.86 0.51865 127.86 127.59 128.11 0 90 19 6 0 0 0 0.00018123 3 77036 80.102 80.102 1 0.99858 0.86683 0 2379500 1168000 1211500 4585 2048 1711 1761 7175;7176;7177 7176 DFTDLIVINEDR 12 0 1 Unmodified _DFTDLIVINEDR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.866 2 725.364638 1448.71472 72804.36 0.8164 0.00059219 -0.055531 -4.028E-05 0.76087 0.00055191 725.865836284351 730.368916910837 127.77 0.5116 127.77 127.5 128.01 0 75 20 5 0 0 0 0.00018123 2 76059 80.24 80.24 1 1.0622 0.95623 0 2026700 838360 1188400 4586 2048 1711 1761 7178;7179 7178 DFTDLIVINEDRK 13 1 1 Unmodified _DFTDLIVINEDRK_ 0 0 1 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.424 2 789.41212 1576.80969 68339.33 1.1052 0.0008725 0.052275 4.1267E-05 1.1575 0.00091376 789.412175550609 798.423260797147 102.08 0.76489 102.08 101.7 102.46 0 324 61 8 0 0 0 1.9139E-08 2 62641 113.63 113.63 1 1.03 1.2365 0 63988000 31185000 32803000 4587 2048 1712 1762 7180;7181 7181 DFTDLIVINEDRK 13 1 1 Unmodified _DFTDLIVINEDRK_ 0 0 1 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.4128 2 789.41212 1576.80969 67700.34 0.85853 0.00067773 -0.12168 -9.6057E-05 0.73685 0.00058168 789.412032789066 798.423198334738 101.27 0.71558 101.27 100.98 101.69 0 304 56 8 0 0 0 4.1266E-13 2 63636 127.42 127.42 1 1.0374 1.2145 0 53303000 23271000 30032000 4588 2048 1712 1762 7182;7183 7183 DFTDLIVINEDRK 13 1 1 Unmodified _DFTDLIVINEDRK_ 0 0 1 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 798.4239 2 789.41212 1576.80969 68119.56 1.0472 0.00082666 -0.24679 -0.00019482 0.8004 0.00063184 789.411461391278 798.42303350844 113.51 0.88985 113.51 113.09 113.98 0 193 43 9 0 0 0 3.5552E-13 2 66108 128.88 116.67 1 0.82554 0.71626 0 17133000 9497000 7635600 4589 2048 1712 1762 7184;7185 7185 DFTDLIVINEDRK 13 1 1 Unmodified _DFTDLIVINEDRK_ 0 0 1 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.4127 2 789.41212 1576.80969 68570.21 0.72938 0.00057578 -0.248 -0.00019578 0.48137 0.00038 789.411502813016 798.423190374728 113.39 0.90292 113.39 113.03 113.93 0 183 45 8 0 0 0 5.0352E-06 2 65092 108.9 102.01 1 0.79109 0.67083 0 17989000 9116700 8872300 4590 2048 1712 1762 7186;7187 7187 DFTVASPAEFVTR 13 0 1 Unmodified _DFTVASPAEFVTR_ 0 0 0 A0A024R0Y2;B2ZZ90;Q13085;A2NX49;O00763;A0A087WVR6;A0A087X0W4;A0A0C4DGT1;S4R3S7 A0A024R0Y2 A0A024R0Y2 hCG_30204;ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3666 2 720.361899 1438.70924 NaN NaN NaN 0.816 0.00058781 NaN NaN NaN NaN 107.53 0.48413 107.53 107.34 107.82 0 0 0 0 0.0038515 1 66962 63.624 37.11 1 NaN NaN 0 2427600 2427600 0 4591 60 1713 1763 7188 7188 DFTVSAMHGDMDQK 14 1 0 2 Oxidation (M) _DFTVSAM(ox)HGDM(ox)DQK_ DFTVSAM(1)HGDM(1)DQK DFTVSAM(138.24)HGDM(138.24)DQK 0 2 0 A8K7F6;P60842;A8K088;J3KT12;B4DNH2;J3KSZ0;J3QL52 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.3395 2 807.332155 1612.64976 66383.52 0.59847 0.00048316 -0.31293 -0.00025264 0.28554 0.00023053 807.332286182704 811.339267204642 26.635 0.6602 26.635 26.215 26.876 0 186 42 9 0 0 0 8.4812E-21 1 11750 138.24 131.11 1 4.3646 4.9097 0 71673000 14449000 57224000 4592 770 1714 1764 7189 7189 596;597 DFTVSAMHGDMDQK 14 1 0 2 Oxidation (M) _DFTVSAM(ox)HGDM(ox)DQK_ DFTVSAM(1)HGDM(1)DQK DFTVSAM(61.96)HGDM(61.96)DQK 0 2 0 A8K7F6;P60842;A8K088;J3KT12;B4DNH2;J3KSZ0;J3QL52 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.8334 2 807.332155 1612.64976 NaN NaN NaN -0.24723 -0.00019959 NaN NaN NaN NaN 26.442 0.27126 26.442 26.268 26.539 0 0 0 0 0.00066222 1 11769 61.958 58.637 1 NaN NaN 0 8922300 8922300 0 4593 770 1714 1764 7190 7190 596;597 DFTVSAMHGDMDQK 14 1 0 2 Oxidation (M) _DFTVSAM(ox)HGDM(ox)DQK_ DFTVSAM(1)HGDM(1)DQK DFTVSAM(157.03)HGDM(157.03)DQK 0 2 0 A8K7F6;P60842;A8K088;J3KT12;B4DNH2;J3KSZ0;J3QL52 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.842 2 807.332155 1612.64976 67394.68 0.48962 0.00039528 -0.15532 -0.00012539 0.3343 0.00026989 807.332312862647 811.339407059721 26.123 0.64648 26.123 25.893 26.54 0 215 35 9 0 0 0 1.2E-29 2 11477 157.03 153.01 1 4.0702 4.5476 0 90818000 18442000 72376000 4594 770 1714 1764 7191;7192 7191 596;597 DFTVSGNLLFIR 12 0 1 Unmodified _DFTVSGNLLFIR_ 0 0 0 A4FUI5 A4FUI5 A4FUI5 CTAG2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.3835 2 691.377352 1380.74015 73790.79 0.62358 0.00043113 0.70491 0.00048736 1.3285 0.00091849 691.377711660683 696.382034361094 124.28 0.48878 124.28 124.04 124.52 0 106 33 4 0 0 0 0.00014575 2 80585 93.111 93.111 1 1.5279 1.5219 0 8611000 2907800 5703200 4595 671 1715 1765 7193;7194 7193 DFTVSGNLLFIR 12 0 1 Unmodified _DFTVSGNLLFIR_ 0 0 0 A4FUI5 A4FUI5 A4FUI5 CTAG2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.8845 2 691.377352 1380.74015 NaN NaN NaN 0.62307 0.00043078 NaN NaN NaN NaN 123.93 0.46122 123.93 123.67 124.13 0 0 0 0 0.00087876 1 82254 84.213 73.383 1 NaN NaN 0 6288300 0 6288300 4596 671 1715 1765 7195 7195 DFVAEPMGEK 10 1 0 Oxidation (M) _DFVAEPM(ox)GEK_ DFVAEPM(1)GEK DFVAEPM(86.67)GEK 0 1 0 A0A024R5H0;O75531;E9PJJ8 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.7578 2 569.757889 1137.50123 78594.8 0.60606 0.00034531 -0.15416 -8.7837E-05 0.45189 0.00025747 569.757919389247 573.76492168724 39.424 1.2763 39.424 39.093 40.37 0 609 104 10 0 0 0 0.00021805 2 20326 86.67 84.61 1 1.0347 1.2288 0 538830000 257850000 280970000 4597 181 1716 1766 7196;7197 7197 147 DFVAEPMGEK 10 1 0 Oxidation (M) _DFVAEPM(ox)GEK_ DFVAEPM(1)GEK DFVAEPM(93.47)GEK 0 1 0 A0A024R5H0;O75531;E9PJJ8 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.7652 2 569.757889 1137.50123 78315.63 0.6108 0.00034801 -0.060841 -3.4664E-05 0.54996 0.00031334 569.757932378578 573.764906201897 38.566 1.176 38.566 38.213 39.389 0 638 101 11 0 0 0 0.0001058 2 20115 93.467 88.482 1 1.0172 1.2001 0 827710000 402690000 425020000 4598 181 1716 1766 7198;7199 7198 147 DFVAEPMGEK 10 1 0 Oxidation (M) _DFVAEPM(ox)GEK_ DFVAEPM(1)GEK DFVAEPM(55.55)GEK 0 1 0 A0A024R5H0;O75531;E9PJJ8 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.765 2 569.757889 1137.50123 78861.42 0.51147 0.00029142 -0.40538 -0.00023097 0.10609 6.0448E-05 569.757561116495 573.764762267012 44.732 0.78637 44.732 44.43 45.216 0 294 59 7 0 0 0 0.0042748 2 21288 55.549 55.549 1 0.58497 0.46329 0 10387000 6566300 3820700 4599 181 1716 1766 7200;7201 7201 147 DFVAEPMGEK 10 1 0 Oxidation (M) _DFVAEPM(ox)GEK_ DFVAEPM(1)GEK DFVAEPM(51.07)GEK 0 1 0 A0A024R5H0;O75531;E9PJJ8 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.765 2 569.757889 1137.50123 77689.31 0.76706 0.00043704 -0.077773 -4.4312E-05 0.68929 0.00039273 569.757637124717 573.764794425704 44.938 0.79967 44.938 44.556 45.355 0 283 58 8 0 0 0 0.0058721 1 20776 51.066 49.981 1 0.61441 0.50506 0 9831800 6179800 3651900 4600 181 1716 1766 7202 7202 147 DFVAEPMGEKPVGSLAGIGEVLGK 24 2 0 Oxidation (M) _DFVAEPM(ox)GEKPVGSLAGIGEVLGK_ DFVAEPM(1)GEKPVGSLAGIGEVLGK DFVAEPM(67.24)GEKPVGSLAGIGEVLGK 0 1 1 A0A024R5H0;O75531 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.7633 3 806.085797 2415.23556 69656.58 0.83586 0.00067378 0.1546 0.00012462 0.99047 0.0007984 806.420820958921 811.762786428954 122.29 0.47833 122.29 122.09 122.57 0 169 23 11 0 0 0 3.5555E-12 2 72918 67.239 67.239 1 0.61163 0.5208 0 25863000 13551000 12312000 4601 181 1717 1767 7203;7204 7204 147 DFVAEPMGEKPVGSLAGIGEVLGK 24 2 0 Oxidation (M) _DFVAEPM(ox)GEKPVGSLAGIGEVLGK_ DFVAEPM(1)GEKPVGSLAGIGEVLGK DFVAEPM(73.04)GEKPVGSLAGIGEVLGK 0 1 1 A0A024R5H0;O75531 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.4227 3 806.085797 2415.23556 68118.06 0.8747 0.00070508 0.3142 0.00025327 1.1889 0.00095835 806.421763403513 812.096765811972 122.13 0.6403 122.13 121.97 122.61 -7.6294E-06 169 32 8 0 0 0 1.1553E-12 3 71875 73.036 73.036 1 0.57609 0.48928 0 26379000 15384000 10995000 4602 181 1717 1767 7205;7206;7207 7207 147 DFVAPHLAQPTGSQSPPPGSK 21 1 0 Unmodified _DFVAPHLAQPTGSQSPPPGSK_ 0 0 0 D3DVL7;B4DU42;Q969Z0;B3KRS4;B3KMT3;B3KM73;H7C4R5 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.6989 3 706.691999 2117.05417 72950.1 0.36252 0.00025619 0.79489 0.00056174 1.1574 0.00081793 707.027056760081 709.364088233552 67.083 0.49476 67.083 66.793 67.287 0 161 36 6 0 0 0 1.106E-09 2 38684 85.932 85.932 1 1.8665 1.9004 0 14152000 6215900 7935900 4603 1036 1718 1768 7208;7209 7208 DFVAPHLAQPTGSQSPPPGSK 21 1 0 Unmodified _DFVAPHLAQPTGSQSPPPGSK_ 0 0 0 D3DVL7;B4DU42;Q969Z0;B3KRS4;B3KMT3;B3KM73;H7C4R5 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.364 3 706.691999 2117.05417 72696.56 0.33487 0.00023665 0.66796 0.00047204 1.0028 0.00070869 706.692273790759 709.698356606434 65.919 0.55437 65.919 65.656 66.211 0 196 47 6 0 0 0 6.5986E-09 4 38859 78.324 73.231 1 1.835 1.9329 0 19833000 7702600 12130000 4604 1036 1718 1768 7210;7211;7212;7213 7211 DFVASIDATYAK 12 1 0 Unmodified _DFVASIDATYAK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.833 2 650.824618 1299.63468 NaN NaN NaN -0.17277 -0.00011245 NaN NaN NaN NaN 89.953 0.55722 89.953 89.608 90.165 0 0 0 0 0.0046303 1 54217 63.624 48.473 1 NaN NaN 0 8674000 0 8674000 4605 568 1719 1769 7214 7214 DFVASIDATYAK 12 1 0 Unmodified _DFVASIDATYAK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.8259 2 650.824618 1299.63468 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.74 1 89.74 89.24 90.24 0 0 0 0 0.00098179 1 54172 73.499 47.561 1 4606 568 1719 1769 7215 7215 DFVASIDATYAK 12 1 0 Unmodified _DFVASIDATYAK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.825 2 650.824618 1299.63468 74899.96 0.78464 0.00051066 0.64021 0.00041667 1.4248 0.00092733 650.824436049948 655.334583764561 89.152 0.60469 89.152 88.782 89.387 0 179 49 6 0 0 0 0.00021727 1 54983 82.261 77.81 1 1.4577 1.6393 0 56367000 19911000 36456000 4607 568 1719 1769 7216 7216 DFVASIDATYAK 12 1 0 Unmodified _DFVASIDATYAK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.826 2 650.824618 1299.63468 76656.05 0.66731 0.0004343 0.53445 0.00034783 1.2018 0.00078213 650.824787220783 654.831914163117 102.35 0.57017 102.35 102.09 102.66 0 114 41 4 0 0 0 0.0024048 2 58112 58.676 54.225 1 0.78527 0.61227 0 3301400 1690500 1610900 4608 568 1719 1769 7217;7218 7218 DFVASIDATYAK 12 1 0 Unmodified _DFVASIDATYAK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.8321 2 650.824618 1299.63468 77845.83 0.48904 0.00031828 -0.18575 -0.00012089 0.30328 0.00019739 650.824480511176 655.333711676429 102.39 0.45387 102.39 102.16 102.61 0 116 32 7 0 0 0 0.016702 2 57211 42.001 37.388 1 1.0029 0.79901 0 2392900 966110 1426800 4609 568 1719 1769 7219;7220 7220 DFVNYLVR 8 0 1 Unmodified _DFVNYLVR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.275 2 513.274367 1024.53418 84680.93 0.5293 0.00027168 0.26916 0.00013816 0.79847 0.00040983 513.274378861974 518.278542220788 98.956 1.5291 98.956 98.113 99.642 0 480 125 7 0 0 0 0.0092222 2 60386 79.116 51.591 1 1.2076 1.3427 0 75225000 33616000 41609000 4610 1691 1720 1770 7221;7222 7222 DFVNYLVR 8 0 1 Unmodified _DFVNYLVR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.2744 2 513.274367 1024.53418 84767.19 0.54992 0.00028226 0.43387 0.00022269 0.98378 0.00050495 513.274432500712 518.278644020499 98.211 1.2508 98.211 97.613 98.863 0 494 104 7 0 0 0 0.0078606 1 61269 81.119 50.934 1 1.2665 1.4469 0 150690000 65375000 85315000 4611 1691 1720 1770 7223 7223 DFVNYLVR 8 0 1 Unmodified _DFVNYLVR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.2745 2 513.274367 1024.53418 84862.29 0.67666 0.00034731 0.0042658 2.1895E-06 0.68092 0.0003495 513.274217625451 518.278390278333 111.41 0.7869 111.41 111.01 111.8 0 179 37 7 0 0 0 0.010663 2 64407 71.715 38.164 1 1.5698 1.303 0 10990000 4116200 6874100 4612 1691 1720 1770 7224;7225 7225 DFVNYLVR 8 0 1 Unmodified _DFVNYLVR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.2784 2 513.274367 1024.53418 83809.48 0.40364 0.00020718 0.11301 5.8004E-05 0.51665 0.00026518 513.274253590656 518.278473459941 111.27 0.74872 111.27 110.93 111.68 7.6294E-06 175 39 6 0 0 0 0.011754 2 63366 78.616 47.326 1 1.6284 1.3168 0 11584000 4383200 7201200 4613 1691 1720 1770 7226;7227 7226 DFVQVMR 7 0 1 Oxidation (M) _DFVQVM(ox)R_ DFVQVM(1)R DFVQVM(51.57)R 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.7302 2 455.726195 909.437837 88596.38 0.33062 0.00015067 1.2916 0.00058861 1.6222 0.00073928 455.727556909322 460.730188168142 43.036 0.68968 43.036 42.674 43.364 0 150 54 4 0 0 0 0.027912 1 22939 51.572 8.5061 1 0.79461 0.81832 0 24717000 13433000 11284000 4614 1665 1721 1771 7228 7228 1443 DFVTDADAEVLEHSGK 16 1 0 Unmodified _DFVTDADAEVLEHSGK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.4125 2 866.904856 1731.79516 NaN NaN NaN -0.70033 -0.00060712 NaN NaN NaN NaN 87.101 0.19122 87.101 86.96 87.152 0 0 0 0 0.0068296 1 52527 51.726 42.537 1 NaN NaN 0 5427300 0 5427300 4615 672 1722 1772 7229 7229 DFVTDADAEVLEHSGK 16 1 0 Unmodified _DFVTDADAEVLEHSGK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.9058 2 866.904856 1731.79516 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.447 1 86.447 85.947 86.947 0 0 0 0 0.0010353 1 53285 78.814 64.656 1 4616 672 1722 1772 7230 7230 DFVTDADAEVLEHSGK 16 1 0 Unmodified _DFVTDADAEVLEHSGK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 866.9035 2 866.904856 1731.79516 67201.46 0.36301 0.00031469 -0.30361 -0.0002632 0.059396 5.1491E-05 867.406928721657 871.412716078873 99.966 0.341 99.966 99.764 100.1 0 65 25 4 0 0 0 1.4077E-06 3 56550 95.651 95.651 1 1.7316 1.3556 0 3864700 1949100 1915600 4617 672 1722 1772 7231;7232;7233 7233 DFWGDDYK 8 1 0 Unmodified _DFWGDDYK_ 0 0 0 Q9NX58;A8K3Y5;D6RDJ1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.2242 2 523.216714 1044.41888 83540.58 0.21291 0.0001114 0.45991 0.00024063 0.67282 0.00035203 523.216888408615 527.223951973956 82.711 0.68768 82.711 82.408 83.096 7.6294E-06 189 42 6 0 0 0 0.051374 1 44953 43.246 43.246 1 1.1868 0.95293 0 7740500 3684400 4056100 4618 2079 1723 1773 7234 7234 DFWGDDYK 8 1 0 Unmodified _DFWGDDYK_ 0 0 0 Q9NX58;A8K3Y5;D6RDJ1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.2168 2 523.216714 1044.41888 83438.26 0.33029 0.00017281 0.048635 2.5446E-05 0.37893 0.00019826 523.216717600309 527.223677753218 83.008 0.55609 83.008 82.772 83.328 0 145 31 6 0 0 0 0.051374 2 44326 43.246 43.246 1 1.222 0.99664 0 5842300 2273600 3568600 4619 2079 1723 1773 7235;7236 7235 DFYAAHPSADAANGSNEDRGEVADEDK 27 1 1 Unmodified _DFYAAHPSADAANGSNEDRGEVADEDK_ 0 0 1 Q5T8Z4;R4GMX3;P35226 Q5T8Z4 Q5T8Z4 BMI1;COMMD3-BMI1 Polycomb complex protein BMI-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 957.0831 3 951.072772 2850.19649 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.154 1 39.154 38.654 39.654 0 0 0 0 0.0045709 1 20693 33.414 27.531 1 4620 1540 1724 1774 7237 7237 DFYFSVK 7 1 0 Unmodified _DFYFSVK_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.2309 2 453.223811 904.433069 90987.13 0.29981 0.00013588 0.13241 6.0011E-05 0.43222 0.00019589 453.223719726157 457.230944732593 87.034 0.19638 87.034 86.934 87.13 0 59 13 6 0 0 0 0.032931 1 52521 64.757 52.401 1 0.77366 0.87216 0 113460000 63631000 49830000 4621 387 1725 1775 7238 7238 DFYFSVK 7 1 0 Unmodified _DFYFSVK_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.224 2 453.223811 904.433069 90734.92 0.43386 0.00019664 0.082702 3.7483E-05 0.51657 0.00023412 453.223660765545 457.230978527583 85.915 0.26117 85.915 85.817 86.078 0 87 19 7 0 0 0 0.029227 2 52936 70.67 55.956 1 0.86938 0.98918 0 146660000 78508000 68151000 4622 387 1725 1775 7239;7240 7240 DFYVAFQDLPTR 12 0 1 Unmodified _DFYVAFQDLPTR_ 0 0 0 Q14566;Q4ZG57 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.8649 2 736.364441 1470.71433 72890.26 0.67762 0.00049898 0.24815 0.00018273 0.92577 0.0006817 736.364405458462 741.36875554701 113.87 0.54745 113.87 113.59 114.14 0 167 39 6 0 0 0 0.00023548 2 73917 85.958 77 1 1.89 1.9046 0 10613000 3994400 6618400 4623 1734 1726 1776 7241;7242 7242 DFYVAFQDLPTR 12 0 1 Unmodified _DFYVAFQDLPTR_ 0 0 0 Q14566;Q4ZG57 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.8658 2 736.364441 1470.71433 73156.48 0.80975 0.00059627 0.40187 0.00029593 1.2116 0.0008922 736.364236130828 741.36948317131 125.14 0.59209 125.14 124.9 125.49 7.6294E-06 106 23 6 0 0 0 0.0008083 2 75075 65.5 65.5 1 1.1459 0.99306 0 2520200 1144500 1375600 4624 1734 1726 1776 7243;7244 7243 DFYVAFQDLPTR 12 0 1 Unmodified _DFYVAFQDLPTR_ 0 0 0 Q14566;Q4ZG57 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 741.3698 2 736.364441 1470.71433 72742.74 0.86118 0.00063414 0.49632 0.00036547 1.3575 0.00099962 736.865477547525 741.370002065634 125.1 0.66154 125.1 124.83 125.49 0 108 28 6 0 0 0 0.00063495 2 74137 68.069 64.395 1 1.1252 0.96324 0 2856300 1347400 1508900 4625 1734 1726 1776 7245;7246 7246 DGALTQLNVAFSR 13 0 1 Unmodified _DGALTQLNVAFSR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8;B4E305 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.3707 2 696.367515 1390.72048 NaN NaN NaN -0.66661 -0.0004642 NaN NaN NaN NaN 101.77 0.66116 101.77 101.49 102.15 0 0 0 0 4.6889E-09 2 62605 112.15 85.633 1 NaN NaN 0 5162000 0 5162000 4626 719 1727 1777 7247;7248 7247 DGALTQLNVAFSR 13 0 1 Unmodified _DGALTQLNVAFSR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8;B4E305 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.3721 2 696.367515 1390.72048 NaN NaN NaN 0.53535 0.0003728 NaN NaN NaN NaN 113.73 0.38096 113.73 113.58 113.96 -7.6294E-06 0 0 0 0.022326 1 66298 46.73 28.462 1 NaN NaN 0 995280 0 995280 4627 719 1727 1777 7249 7249 DGALTQLNVAFSR 13 0 1 Unmodified _DGALTQLNVAFSR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8;B4E305 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.3688 2 696.367515 1390.72048 NaN NaN NaN 2.4804 0.0017273 NaN NaN NaN NaN 113.74 0.85439 113.74 113.48 114.33 0 0 0 0 0.02389 1 66325 45.915 35.086 1 NaN NaN 0 2992200 2992200 0 4628 719 1727 1777 7250 7250 DGANIVIAAK 10 1 0 Unmodified _DGANIVIAAK_ 0 0 0 B2R923;A0A024R159;Q6YN16 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.2865 2 486.279649 970.544745 87333.44 0.20815 0.00010122 -0.35002 -0.00017021 -0.14188 -6.8991E-05 486.279632226102 490.286553155719 53.676 0.42316 53.676 53.432 53.855 0 81 31 4 0 0 0 0.00022829 1 30051 93.143 73.507 1 2.4144 2.3809 0 24762000 7830600 16932000 4629 70 1728 1778 7251 7251 DGDSVMVLPTIPEEEAK 17 1 0 Oxidation (M) _DGDSVM(ox)VLPTIPEEEAK_ DGDSVM(1)VLPTIPEEEAK DGDSVM(63.76)VLPTIPEEEAK 0 1 0 V9HWC7;P30041 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 927.4662 2 923.442957 1844.87136 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.379 1 99.379 98.879 99.879 0 0 0 0 0.00022023 1 60824 63.76 52.547 1 4630 1527 1729 1779 7252 7252 1293 DGEDQTQDTELVETRPAGDGTFQK 24 1 1 Unmodified _DGEDQTQDTELVETRPAGDGTFQK_ 0 0 1 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U3N9E1 U3N9E1 HLA-A;HLA-C;HLA;HLA-Cw;HLA-A*31;MHC class I HLA-A;HLA-A*0226;HLA-A*33;HLA-A*02;HLA-DQB1;HLA-B;HLA A;HLA-A24AK;HLA-A*0201V3;Cw;HLA-H HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain;HLA class I histocompatibility antigen, A-34 alpha chain;HLA class I histocompatibility antigen, A-33 alpha chain;HLA class I histocompatibility antigen, A-31 alpha chain;HLA class I histocompatibility antigen, A-30 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-32 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, A-66 alpha chain;HLA class I histocompatibility antigen, A-43 alpha chain;HLA class I histocompatibility antigen, A-36 alpha chain;HLA class I histocompatibility antigen, A-26 alpha chain;HLA class I histocompatibility antigen, A-23 alpha chain;HLA class I histocompatibility antigen, A-1 alpha chain;HLA class I histocompatibility antigen, A-25 alpha chain;HLA class I histocompatibility antigen, A-11 alpha chain;HLA class I histocompatibility antigen, A-24 alpha chain;HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, Cw-5 alpha chain;HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-8 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;HLA class I histocompatibility antigen, Cw-17 alpha chain;Beta-2-microglobulin;Putative HLA class I histocompatibility antigen, alpha chain H;HLA class I histocompatibility antigen, B-73 alpha chain;HLA class I histocompatibility antigen, A-80 alpha chain;HLA class I histocompatibility antigen, Cw-2 alpha chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 880.0705 3 879.735209 2636.1838 64759.62 0.53948 0.0004746 0.23745 0.00020889 0.77692 0.00068349 880.070032621293 885.742892259329 62.948 0.53852 62.948 62.689 63.228 3.8147E-06 240 51 6 0 0 0 1.4072E-12 1 36152 73.981 71.057 1 0.86386 1.0047 0 30291000 16529000 13761000 4631 395 1730 1780 7253 7253 DGEDQTQDTELVETRPAGDGTFQK 24 1 1 Unmodified _DGEDQTQDTELVETRPAGDGTFQK_ 0 0 1 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U3N9E1 U3N9E1 HLA-A;HLA-C;HLA;HLA-Cw;HLA-A*31;MHC class I HLA-A;HLA-A*0226;HLA-A*33;HLA-A*02;HLA-DQB1;HLA-B;HLA A;HLA-A24AK;HLA-A*0201V3;Cw;HLA-H HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain;HLA class I histocompatibility antigen, A-34 alpha chain;HLA class I histocompatibility antigen, A-33 alpha chain;HLA class I histocompatibility antigen, A-31 alpha chain;HLA class I histocompatibility antigen, A-30 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-32 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, A-66 alpha chain;HLA class I histocompatibility antigen, A-43 alpha chain;HLA class I histocompatibility antigen, A-36 alpha chain;HLA class I histocompatibility antigen, A-26 alpha chain;HLA class I histocompatibility antigen, A-23 alpha chain;HLA class I histocompatibility antigen, A-1 alpha chain;HLA class I histocompatibility antigen, A-25 alpha chain;HLA class I histocompatibility antigen, A-11 alpha chain;HLA class I histocompatibility antigen, A-24 alpha chain;HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, Cw-5 alpha chain;HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-8 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;HLA class I histocompatibility antigen, Cw-17 alpha chain;Beta-2-microglobulin;Putative HLA class I histocompatibility antigen, alpha chain H;HLA class I histocompatibility antigen, B-73 alpha chain;HLA class I histocompatibility antigen, A-80 alpha chain;HLA class I histocompatibility antigen, Cw-2 alpha chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 879.7343 3 879.735209 2636.1838 64824.34 0.45877 0.0004036 0.17152 0.00015089 0.63029 0.00055449 880.069751160464 885.742881318673 61.899 0.48058 61.899 61.713 62.194 0 217 43 6 0 0 0 7.2972E-13 1 36379 75.646 75.646 1 0.90199 1.0437 0 32963000 16519000 16444000 4632 395 1730 1780 7254 7254 DGEDQTQDTELVETRPAGDGTFQK 24 1 1 Unmodified _DGEDQTQDTELVETRPAGDGTFQK_ 0 0 1 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U3N9E1 U3N9E1 HLA-A;HLA-C;HLA;HLA-Cw;HLA-A*31;MHC class I HLA-A;HLA-A*0226;HLA-A*33;HLA-A*02;HLA-DQB1;HLA-B;HLA A;HLA-A24AK;HLA-A*0201V3;Cw;HLA-H HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain;HLA class I histocompatibility antigen, A-34 alpha chain;HLA class I histocompatibility antigen, A-33 alpha chain;HLA class I histocompatibility antigen, A-31 alpha chain;HLA class I histocompatibility antigen, A-30 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-32 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, A-66 alpha chain;HLA class I histocompatibility antigen, A-43 alpha chain;HLA class I histocompatibility antigen, A-36 alpha chain;HLA class I histocompatibility antigen, A-26 alpha chain;HLA class I histocompatibility antigen, A-23 alpha chain;HLA class I histocompatibility antigen, A-1 alpha chain;HLA class I histocompatibility antigen, A-25 alpha chain;HLA class I histocompatibility antigen, A-11 alpha chain;HLA class I histocompatibility antigen, A-24 alpha chain;HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, Cw-5 alpha chain;HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-8 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;HLA class I histocompatibility antigen, Cw-17 alpha chain;Beta-2-microglobulin;Putative HLA class I histocompatibility antigen, alpha chain H;HLA class I histocompatibility antigen, B-73 alpha chain;HLA class I histocompatibility antigen, A-80 alpha chain;HLA class I histocompatibility antigen, Cw-2 alpha chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 880.0705 3 879.735209 2636.1838 64028.5 0.46643 0.00041033 0.36507 0.00032116 0.8315 0.0007315 880.069891179278 886.076994018881 72.592 0.53921 72.592 72.32 72.859 -7.6294E-06 197 41 7 0 0 0 0.00011072 1 38303 36.271 36.271 1 1.0335 0.87534 0 8353600 3661300 4692300 4633 395 1730 1780 7255 7255 DGEDQTQDTELVETRPAGDGTFQK 24 1 1 Unmodified _DGEDQTQDTELVETRPAGDGTFQK_ 0 0 1 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0S4XQP0;A0A0S4XQM8;A0A0S2IKY1;A0A0S1MSS0;A0A0K3ATN2;A0A0K3AQ87;A0A0K0TQ18;A0A0H3W548;A0A0G2R211;A0A0A8R645;A0A090KFS3;A0A090CXP3;A0A060VD16;A0A060CZ20;V5NQV1;S6B6S2;Q860B0;Q85ZX8;Q7YQB2;Q6R742;Q6R739;Q6IVK0;Q64EU5;Q5RIP0;Q5QT33;Q546I7;Q53X46;Q52QV3;Q3KT81;Q27W00;Q0PHP6;Q001S2;O19617;M4QNN1;K7DWB0;K0P2X1;I3ZN89;I2G9F8;H8XVX3;H2B3H3;F1CZ00;E3UPC4;D9UAZ9;D3K0R2;D3K0R1;C5IYE6;C4PKH3;C1K0Y5;C1K0Y1;C1K0Y0;C1K0X7;C1K0X5;C1K0X4;C1K0X3;C0LNY0;B2ZSE2;A4Q9R6;A0A1D3KYN4;A0A1D0C403;A0A1C3PIA1;A0A1C3PI75;A0A1C3PI74;A0A1C3PI20;A0A1C3PI06;A0A1C3PHZ3;A0A1C3PHZ0;A0A1C3PHY4;A0A1C3PHY2;A0A1C3PHX9;A0A1C3PHX2;A0A1C3PHX0;A0A1C3PHW9;A0A1C3PHW5;A0A1C3PHW3;A0A1C3PHU4;A0A1C3PHT8;A0A1C3PHT2;A0A1C3PHS8;A0A1C3PHS6;A0A1C3PHS4;A0A1C3PHQ8;A0A1C3PHQ2;A0A1C3PHP4;A0A1C3PHN2;A0A1C3PHN1;A0A1B1FC03;A0A191XZC3;A0A173AD97;A0A173AD87;A0A173AD40;A0A173AD10;A0A140DJD0;A0A125R6G5;A0A0U5QLT5;A0A0U5Q1X6;A0A0U5Q0Z5;A0A0U5Q0E7;A0A0U5Q0D3;A0A0U5Q0D1;A0A0U5PZB5;A0A0U5PXQ9;A0A0U5PU85;A0A0U5KKC2;A0A0U5KJ72;A0A0U5IHU5;A0A0U5IHT2;A0A0S4T4X7;A0A0S4T4W1;A0A0S4T4S3;A0A0S4T4R3;A0A0S4T4N4;A0A0S4T4M2;A0A0S4T4M1;A0A0S4T4K2;A0A0S4T4H1;A0A0S4T4F5;A0A0S4T4D4;A0A0S4T4A3;A0A0S4T489;A0A0S4T485;A0A0S4T476;A0A0S4T452;A0A0S4T432;A0A0S4T402;A0A0S4T400;A0A0S4T3Y6;A0A0S4T3W5;A0A0S4T3V2;A0A0S4T3U7;A0A0S4T3Q4;A0A0S4T3P9;A0A0S4T3N9;A0A0S4T3I8;A0A0S4T3I7;A0A0S4T3H1;A0A0S4T3G2;A0A0S4T3F5;A0A0S4T3C3;A0A0S4T3A1;A0A0S4T351;A0A0S4T322;A0A0S4T2Z1;A0A0S4T2P1;A0A0S4T2L8;A0A0S4T2G2;A0A0S4T2C9;A0A0S4T2B8;A0A0S4T2A5;A0A0S4T295;A0A0S4T289;A0A0S4T273;A0A0S4T219;A0A0S4T203;A0A0S4T1S9;A0A0S4T1S1;A0A0S4T1N7;A0A0S4T1L5;A0A0S4T1L3;A0A0S4T1K5;A0A0S4T1K1;A0A0S4T1J0;A0A0S4T1I6;A0A0S4T1I4;A0A0S4T1H4;A0A0S4T1G7;A0A0S4T1F0;A0A0S4T1E3;A0A0S4T1D1;A0A0S4T1B9;A0A0S4T197;A0A0S4T183;A0A0K8K5V0;A0A0B7NY93;A0A0B7NY91;A0A0B7NY86;A0A0B7NY81;A0A0B7NXX4;A0A0B7NXV1;A0A0B7NXU1;A0A0B7NXT1;A0A0B7NXS4;A0A0B7NX31;A0A0B7NS21;A0A0B7NS05;A0A0B7NRZ4;A0A0B7NRY9;A0A0B7NRY4;A0A0B7NRX1;A0A0B7NNL2;A0A0B7NNI9;A0A0A8R5V5;A0A0A1IX96;A0A090MF27;A0A090MEZ8;A0A090MEY3;A0A090MEW2;A0A090KMD4;A0A090KM82;A0A090KM77;A0A090KKK1;A0A090KKF6;A0A090KKD3;A0A090KFY5;A0A090KFV0;A0A090KF65;A0A090KF09;A0A090KEZ4;A0A076FQ79;A0A060VHI5;A0A060VHI0;A0A060VD27;A0A060VD21;A0A060VD03;A0A060VCX7;A0A060VCV3;A0A1C3PHZ6;A0A191XZN8;A0A0S4T3M3;A0A0S4T1D5;A0A0B7NNJ3;A0A090KF00;A0A140T962;A0A140T921;A0A0G2JIF0;Q5SRN5;A0A140T8Y4;A0A0G2JIF2;Q6R743;A2AEA2;A0A140T9J9;A0A140T9H5;A0A0G2JH50;I2G9F9;C9E8W1;A0A0B7NNM1;Q59GJ2;A0A0G2JPD3;A0A0G2JL56;Q2UVJ3;A2BF26;A0A140T9U8;A0A140T9B3;B4DVY0;P30457;P30456;P30455;P30450;P30447;P30443;P18462;P13746;P05534;P04439;Q9TNN7;Q29963;Q07000;P30505;P10321;Q95604;Q7YP23;Q9MYI2;Q9MYH8;Q9GJP2;Q9GJ61;Q7YP25;Q7YNY6;Q7YNY0;Q7YNX7;Q2L4E7;Q0MSI1;H2DH14;F8T959;B7UE87;B1PQ27;A5A8M7;A2BCQ5;A0A128E1E0;A0A076V767;A0A068W643;A0A0U5HZL8;B4DJI3;E7AJF9;B4DVB9;Q29946;B4DVC4;E1XUP8;U6EUF0;U6ERM7;T2MJ89;S5DU19;S5DTD9;S5DL83;S0F2B5;Q5NTA9;Q2UV91;Q1G0L6;M5EE32;L7Y4K8;L7V338;K7W4U9;I7GYF8;I7B4Y2;I6RAH1;I6QNT6;I2GUK5;I1U8N0;H8XBT9;G4VTY3;F2XI33;E9RJS6;E3Q0Y2;E1CJE2;D3JW64;C9E9Y0;C7C5G9;A9QUT7;A0A167RMR1;A0A0S1S0E7;A0A0K2GVF7;A0A0G3ENZ7;A0A0F7YY45;A0A0F7NJ09;A0A0A0U836;E0WMP9;P79497;D9UAZ8;D9UAZ3;C1K9J3;C0KTQ6;A5PHT7;A0A0H4LY29;Q6IVY5;U5YKG4;F6IQW3;F6IQW2;F6IQW1;A0A1G4HPU0;A0A142J144;Q95HL2;H2B3F1;A0A060VD08;A0A060VCY5;V5NRG5;O19677;V5NQW5;V5NQR3;V5NQE9;F6IQN1;F6IQI5;F6IQB0;F6IQA9;F6IQA7;A0A0U5QLU5;V6DZ76;Q95HA5;K7WT83;D9UB08;A0A1C3PHF2;A0A0U5Q1V3;A0A0U5Q1R3;A0A0U5Q035;A0A0S4XRI6;A0A0S4XRI5;A0A0S4XQV7;A0A0M7BFM3;A0A0B7NX62;Q7YQB1;Q52QV2;Q29987;G9FZ34;D9UB04;D6CJC1;D3XQC3;D2EBJ4;C1K0X8;B8YJM6;B6ZBY4;B1PWE4;A7UM82;A0A1D8MAL8;A0A1D3KYM9;A0A1C3PI47;A0A1C3PHU3;A0A1C3PHR5;A0A173AD55;A0A142J2B0;A0A0U5Q0W6;A0A0U5PZ41;A0A0S4T4P6;A0A0S4T3N7;A0A0S4T3I6;A0A0S4T2U5;A0A0S4T261;A0A0S4T1H9;A0A0S4T1H1;A0A0B7NY70;A0A0B7NX46;A0A0B7NX39;A0A0B7NNN9;A0A0B7NNK4;A0A0B7NNJ6;A0A0B6VWU6;A0A090KF14;A0A060VHD5;A0A060VG30;A0A060VD00;A0A060VCY4;B7U5E0;P01893;Q31612;Q09160;P30501 U3N9E1 U3N9E1 HLA-A;HLA-C;HLA;HLA-Cw;HLA-A*31;MHC class I HLA-A;HLA-A*0226;HLA-A*33;HLA-A*02;HLA-DQB1;HLA-B;HLA A;HLA-A24AK;HLA-A*0201V3;Cw;HLA-H HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain;HLA class I histocompatibility antigen, A-34 alpha chain;HLA class I histocompatibility antigen, A-33 alpha chain;HLA class I histocompatibility antigen, A-31 alpha chain;HLA class I histocompatibility antigen, A-30 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-32 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, A-66 alpha chain;HLA class I histocompatibility antigen, A-43 alpha chain;HLA class I histocompatibility antigen, A-36 alpha chain;HLA class I histocompatibility antigen, A-26 alpha chain;HLA class I histocompatibility antigen, A-23 alpha chain;HLA class I histocompatibility antigen, A-1 alpha chain;HLA class I histocompatibility antigen, A-25 alpha chain;HLA class I histocompatibility antigen, A-11 alpha chain;HLA class I histocompatibility antigen, A-24 alpha chain;HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, Cw-5 alpha chain;HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-8 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;HLA class I histocompatibility antigen, Cw-17 alpha chain;Beta-2-microglobulin;Putative HLA class I histocompatibility antigen, alpha chain H;HLA class I histocompatibility antigen, B-73 alpha chain;HLA class I histocompatibility antigen, A-80 alpha chain;HLA class I histocompatibility antigen, Cw-2 alpha chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 880.0708 3 879.735209 2636.1838 65020.02 0.19592 0.00017236 0.33286 0.00029283 0.52878 0.00046519 880.403982269606 885.743162839113 73.196 0.5014 73.196 72.988 73.49 0 188 36 7 0 0 0 1.1466E-05 1 37884 39.593 39.593 1 1.1607 0.97635 0 7474000 3262200 4211900 4634 395 1730 1780 7256 7256 DGEQHEDLNEVAK 13 1 0 Unmodified _DGEQHEDLNEVAK_ 0 0 0 O95831;A0A140VK04;E9PMA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.3376 2 742.336609 1482.65867 70551.02 0.76509 0.00056795 1.4434 0.0010715 2.2085 0.0016394 742.336532609847 746.847426230152 25.313 0.35548 25.313 25.113 25.469 0 79 16 7 0 0 0 1.3586E-23 2 10925 155.66 129.62 1 2.1566 2.3739 0 55055000 18305000 36750000 4635 1431 1731 1781 7257;7258 7257 DGEQHEDLNEVAK 13 1 0 Unmodified _DGEQHEDLNEVAK_ 0 0 0 O95831;A0A140VK04;E9PMA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.3363 2 742.336609 1482.65867 NaN NaN NaN 0.23063 0.0001712 NaN NaN NaN NaN 25.093 0.27722 25.093 24.908 25.185 0 0 0 0 1.1361E-162 1 10716 259.75 215 1 NaN NaN 0 12968000 12968000 0 4636 1431 1731 1781 7259 7259 DGEQHEDLNEVAK 13 1 0 Unmodified _DGEQHEDLNEVAK_ 0 0 0 O95831;A0A140VK04;E9PMA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.8981 3 495.226832 1482.65867 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.081 1 25.081 24.581 25.581 0 0 0 0 0.00010385 1 10728 94.551 82.386 1 4637 1431 1731 1781 7260 7260 DGEQHEDLNEVAK 13 1 0 Unmodified _DGEQHEDLNEVAK_ 0 0 0 O95831;A0A140VK04;E9PMA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 746.3447 2 742.336609 1482.65867 71120.7 0.67971 0.00050457 -0.046179 -3.428E-05 0.63353 0.00047029 742.336558821434 746.343712208245 28.37 0.30736 28.37 28.216 28.524 1.9073E-06 78 15 6 0 0 0 0.0011219 2 11291 59.116 40.849 1 1.5765 1.25 0 4325500 1735100 2590300 4638 1431 1731 1781 7261;7262 7261 DGEVDATASSIPELER 16 0 1 Unmodified _DGEVDATASSIPELER_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.9434 2 844.902313 1687.79007 66278.97 1.2004 0.0010142 -0.55905 -0.00047234 0.64138 0.00054191 844.901482853306 849.905923275179 84.326 0.5631 84.326 84.017 84.58 -7.6294E-06 173 43 6 0 0 0 2.935E-06 3 50678 90.793 90.793 1 0.96033 0.97289 0 28359000 13430000 14929000 4639 1260 1732 1782 7263;7264;7265 7265 DGEVDATASSIPELER 16 0 1 Unmodified _DGEVDATASSIPELER_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.9011 2 844.902313 1687.79007 66291.32 0.96376 0.00081428 0.15035 0.00012703 1.1141 0.00094131 844.901948640755 849.906060097979 83.581 0.59424 83.581 83.27 83.864 0 230 45 8 0 0 0 1.5487E-08 3 51057 103.88 94.448 1 0.85134 0.91011 0 24888000 14688000 10200000 4640 1260 1732 1782 7266;7267;7268 7267 DGEVDATASSIPELER 16 0 1 Unmodified _DGEVDATASSIPELER_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.907 2 844.902313 1687.79007 66713.65 0.90483 0.00076449 0.081196 6.8603E-05 0.98603 0.0008331 844.901890202286 849.906304612358 96.195 0.60251 96.195 95.937 96.539 0 189 37 8 0 0 0 0.014297 1 53839 31.526 31.526 1 2.0066 1.7259 0 7645900 2259900 5386000 4641 1260 1732 1782 7269 7269 DGEVDATASSIPELER 16 0 1 Unmodified _DGEVDATASSIPELER_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.4049 2 844.902313 1687.79007 66622.98 0.45255 0.00038236 0.47597 0.00040215 0.92852 0.00078451 844.902195542274 849.906468552421 96.237 0.59842 96.237 95.973 96.571 0 186 36 7 0 0 0 0.000154 2 53226 69.314 69.314 1 1.9877 1.6557 0 6982200 2291300 4691000 4642 1260 1732 1782 7270;7271 7271 DGFHIR 6 0 1 Unmodified _DGFHIR_ 0 0 0 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 372.6926 2 372.693013 743.371472 95249.02 0.26158 9.7488E-05 0.29946 0.00011161 0.56103 0.00020909 372.693119551963 377.69710814322 29.117 0.58373 29.117 28.866 29.45 0 125 36 8 0 0 0 0.034228 1 13991 112.95 45.66 1 0.89926 1.0688 0 1101300000 600820000 500490000 4643 1524;1266 1733 1783 7272 7272 DGGAAAAGPRPEQEPR 16 0 2 Unmodified _DGGAAAAGPRPEQEPR_ 0 0 1 Q8NCN4 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.5968 3 526.925487 1577.75463 82325.12 0.31848 0.00016781 0.66401 0.00034989 0.98249 0.0005177 527.260924208908 533.597467172845 19.048 0.17261 19.048 18.963 19.135 0 30 10 5 0 0 0 7.1267E-05 2 5525 58.83 51.948 1 0.76977 0.75514 0 3753100 2678300 1074800 4644 1923 1734 1784 7273;7274 7273 DGGILPR 7 0 1 Unmodified _DGGILPR_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 364.2089 2 364.208495 726.402438 NaN NaN NaN 0.39049 0.00014222 NaN NaN NaN NaN 43.683 0.62298 43.683 43.309 43.931 -3.8147E-06 0 0 0 0.016949 1 23316 102.98 39.398 1 NaN NaN 0 13273000 13273000 0 4645 1421 1735 1785 7275 7275 DGGILPR 7 0 1 Unmodified _DGGILPR_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 364.2083 2 364.208495 726.402438 102345 0.44277 0.00016126 0.37726 0.0001374 0.82002 0.00029866 364.208489204766 369.212960559499 42.606 0.63699 42.606 42.258 42.895 0 161 51 5 0 0 0 0.026979 1 22905 84.359 45.537 1 0.74017 0.80943 0 34956000 22203000 12753000 4646 1421 1735 1785 7276 7276 DGGILPR 7 0 1 Unmodified _DGGILPR_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 364.2087 2 364.208495 726.402438 99345.32 -0.090632 -3.3009E-05 0.28975 0.00010553 0.19912 7.2521E-05 364.208584275213 369.212534809858 48.755 0.55009 48.755 48.455 49.005 -3.8147E-06 137 43 4 0 0 0 0.038498 1 23761 60.358 33.238 1 1.2274 1.0479 0 5704600 2516500 3188100 4647 1421 1735 1785 7277 7277 DGGILPR 7 0 1 Unmodified _DGGILPR_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 364.2082 2 364.208495 726.402438 101413 -0.25534 -9.2997E-05 0.19024 6.9286E-05 -0.065104 -2.3711E-05 364.208540614203 369.212528671396 48.756 0.57745 48.756 48.42 48.998 0 173 47 6 0 0 0 0.028425 1 23153 71.949 44.829 1 1.3411 1.1127 0 5429200 2457900 2971300 4648 1421 1735 1785 7278 7278 DGHFNPEVVK 10 1 0 Unmodified _DGHFNPEVVK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1;E9PJU3;E9PJG2 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.2924 2 571.285463 1140.55637 NaN NaN NaN 0.13154 7.5148E-05 NaN NaN NaN NaN 42.912 0.45154 42.912 42.717 43.169 0 0 0 0 0.032178 1 19557 51.436 42.904 1 NaN NaN 0 1786700 0 1786700 4649 135 1736 1786 7279 7279 DGIDDESYEAIFK 13 1 0 Unmodified _DGIDDESYEAIFK_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.8402 2 751.338286 1500.66202 71347.61 0.56972 0.00042806 0.15709 0.00011803 0.72682 0.00054608 751.338494172938 755.34545091063 103.88 0.93233 103.88 103.37 104.3 0 305 75 6 0 0 0 0.00015089 2 64109 84.658 68.768 1 0.76981 0.75857 0 19555000 11899000 7655900 4650 1715 1737 1787 7280;7281 7281 DGIDDESYEAIFK 13 1 0 Unmodified _DGIDDESYEAIFK_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.3395 2 751.338286 1500.66202 72033.17 0.43141 0.00032414 0.38639 0.00029031 0.8178 0.00061445 751.33863809266 755.345650437652 103.4 0.87505 103.4 102.95 103.83 0 285 72 6 0 0 0 0.00013091 3 65520 89.171 78.007 1 0.73694 0.74465 0 28636000 13820000 14816000 4651 1715 1737 1787 7282;7283;7284 7284 DGIDDESYEAIFKPVMSK 18 2 0 Unmodified _DGIDDESYEAIFKPVMSK_ 0 0 1 Q6IT96;Q13547;B5BU61;B4DRG0 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.3352 3 681.990834 2042.95067 75500.28 0.53969 0.00036807 -0.047882 -3.2655E-05 0.49181 0.00033541 682.325532633426 687.668367575965 120.53 0.46574 120.53 120.32 120.78 0 74 21 6 0 0 0 0.0039633 1 71516 29.444 29.444 1 2.0101 1.7939 0 1723600 435370 1288300 4652 1715 1738 1788 7285 7285 DGIDDESYEAIFKPVMSK 18 2 0 Unmodified _DGIDDESYEAIFKPVMSK_ 0 0 1 Q6IT96;Q13547;B5BU61;B4DRG0 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.6691 3 681.990834 2042.95067 73617.7 0.8171 0.00055726 -0.7572 -0.0005164 0.059902 4.0853E-05 681.989979947379 687.333215745064 120.34 0.4789 120.34 120.1 120.58 -7.6294E-06 64 27 5 0 0 0 0.062047 1 70529 12.06 8.2801 1 2.5771 2.2646 0 2044200 541210 1503000 4653 1715 1738 1788 7286 7286 DGIDDESYGQIFKPIISK 18 2 0 Unmodified _DGIDDESYGQIFKPIISK_ 0 0 1 Q92769;B3KUJ5 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3552 3 675.677355 2024.01024 73655.81 0.89502 0.00060475 0.0045544 3.0773E-06 0.89958 0.00060782 676.011672222538 681.020119205037 108.92 0.83881 108.92 108.56 109.4 -7.6294E-06 285 53 8 0 0 0 6.9628E-06 2 68006 76.155 76.155 1 0.79355 0.93653 0 103320000 58825000 44498000 4654 1952 1739 1789 7287;7288 7288 DGIDDESYGQIFKPIISK 18 2 0 Unmodified _DGIDDESYGQIFKPIISK_ 0 0 1 Q92769;B3KUJ5 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 676.012 3 675.677355 2024.01024 73107.73 0.63736 0.00043065 -0.23533 -0.00015901 0.40203 0.00027164 675.677512811257 681.020058755853 108.37 0.87322 108.37 108.07 108.94 0 564 53 16 0 0 0 9.4959E-06 2 69400 72.421 72.421 1 0.84493 0.98137 0 110840000 65250000 45585000 4655 1952 1739 1789 7289;7290 7290 DGIDDESYGQIFKPIISK 18 2 0 Unmodified _DGIDDESYGQIFKPIISK_ 0 0 1 Q92769;B3KUJ5 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.0206 3 675.677355 2024.01024 74101.14 0.93632 0.00063265 -0.19359 -0.0001308 0.74273 0.00050185 676.011461144123 681.020045371667 119.47 0.84435 119.47 119.25 120.09 7.6294E-06 174 37 8 0 0 0 0.00024109 2 70654 44.089 44.089 1 1.6372 1.3916 0 36506000 14254000 22252000 4656 1952 1739 1789 7291;7292 7291 DGIDDESYGQIFKPIISK 18 2 0 Unmodified _DGIDDESYGQIFKPIISK_ 0 0 1 Q92769;B3KUJ5 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1021.5251 2 1013.01239 2024.01024 60148.51 0.68815 0.0006971 -0.064103 -6.4937E-05 0.62404 0.00063216 1013.01118273969 1021.52786326601 119.47 0.33457 119.47 119.31 119.65 0 47 12 6 0 0 0 0.0063439 1 70714 48.112 48.112 1 1.8635 1.6043 0 6118500 2283400 3835200 4657 1952 1739 1789 7293 7293 DGIDDESYGQIFKPIISK 18 2 0 Unmodified _DGIDDESYGQIFKPIISK_ 0 0 1 Q92769;B3KUJ5 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.0203 3 675.677355 2024.01024 73471.25 0.66809 0.00045141 -0.044537 -3.0093E-05 0.62355 0.00042132 676.011590863884 681.020056670251 119.32 0.68311 119.32 119.06 119.74 0 172 30 9 0 0 0 9.4959E-06 3 69675 72.421 72.421 1 1.5631 1.3287 0 30558000 11334000 19223000 4658 1952 1739 1789 7294;7295;7296 7294 DGIEFAFK 8 1 0 Unmodified _DGIEFAFK_ 0 0 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;Q6AI02;B4DQ46;Q4LE48;Q8WVM7;Q68DW7;B4E2Q7 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2;DKFZp686P168;STAG1 variant protein;STAG1;DKFZp781D1416 Cohesin subunit SA-2;Cohesin subunit SA-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.7346 2 463.734543 925.454533 93320.7 0.60743 0.00028168 -0.13549 -6.283E-05 0.47194 0.00021885 463.734444832274 467.741455750788 92.203 0.43688 92.203 92.001 92.438 0 110 42 4 0 0 0 0.042651 1 55931 46.426 36.676 1 0.78599 0.79862 0 6309900 3729500 2580400 4659 863 1740 1790 7297 7297 DGIISDIFDK 10 1 0 Unmodified _DGIISDIFDK_ 0 0 0 Q8IW76;B7ZKK7;P19525 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.7948 2 561.787504 1121.56045 82296.41 0.95269 0.00053521 -0.2099 -0.00011792 0.74279 0.00041729 561.787297702766 565.794395282003 113.64 0.57658 113.64 113.3 113.87 0 177 41 6 0 0 0 0.0088882 2 71932 55.461 48.241 1 1.4661 1.5311 0 12173000 4320700 7852300 4660 1111 1741 1791 7298;7299 7299 DGIISDIFDK 10 1 0 Unmodified _DGIISDIFDK_ 0 0 0 Q8IW76;B7ZKK7;P19525 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.7949 2 561.787504 1121.56045 82342.86 0.72088 0.00040498 -0.11459 -6.4377E-05 0.60629 0.00034061 561.787283937624 565.794418368209 113.08 0.57113 113.08 112.78 113.35 0 165 38 6 0 0 0 0.0052581 1 73235 60.398 48.042 1 1.4741 1.5042 0 12030000 4869500 7160800 4661 1111 1741 1791 7300 7300 DGIQLSEYLPEVK 13 1 0 Unmodified _DGIQLSEYLPEVK_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.8978 2 745.890489 1489.76642 71681.86 0.61073 0.00045554 0.36671 0.00027353 0.97745 0.00072907 745.891635924613 749.897503391 115.32 0.41776 115.32 115.08 115.5 0 112 27 5 0 0 0 0.00013325 2 73368 80.245 80.245 1 1.1149 1.1451 0 10661000 5265400 5396100 4662 1070 1742 1792 7301;7302 7301 DGIQLSEYLPEVK 13 1 0 Unmodified _DGIQLSEYLPEVK_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.3942 2 745.890489 1489.76642 71099.13 0.82218 0.00061325 0.52796 0.0003938 1.3501 0.0010071 745.890843374814 749.89798779172 114.83 0.48146 114.83 114.57 115.06 0 126 29 6 0 0 0 0.00028676 1 74770 79.82 69.462 1 0.97413 0.989 0 12800000 6606500 6193600 4663 1070 1742 1792 7303 7303 DGIQLSEYLPEVK 13 1 0 Unmodified _DGIQLSEYLPEVK_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 745.8906 2 745.890489 1489.76642 74097.19 0.93805 0.00069968 0.41032 0.00030605 1.3484 0.0010057 745.891073470073 749.897715086965 126.73 0.58566 126.73 126.47 127.06 7.6294E-06 93 23 7 0 0 0 0.029872 1 76257 45.653 45.653 1 1.1525 0.89463 0 3456000 1612100 1843900 4664 1070 1742 1792 7304 7304 DGIQLSEYLPEVK 13 1 0 Unmodified _DGIQLSEYLPEVK_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 745.8906 2 745.890489 1489.76642 71449.89 0.60747 0.0004531 0.2016 0.00015037 0.80907 0.00060348 745.890841459147 749.89744809707 126.6 0.60775 126.6 126.32 126.93 7.6294E-06 92 26 6 0 0 0 0.0091057 1 75290 53.569 53.569 1 1.235 1.0116 0 4959700 2246200 2713500 4665 1070 1742 1792 7305 7305 DGLAALAYHAGLSDSAR 17 0 1 Unmodified _DGLAALAYHAGLSDSAR_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z8C1 B2RAN0 B2RAN0 BLM Bloom syndrome protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.4235 2 844.42355 1686.83255 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.187 1 88.187 87.687 88.687 0 0 0 0 0.00050574 1 53167 62.162 45.248 1 4666 873 1743 1793 7306 7306 DGLAALAYHAGLSDSAR 17 0 1 Unmodified _DGLAALAYHAGLSDSAR_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z8C1 B2RAN0 B2RAN0 BLM Bloom syndrome protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.425 2 844.42355 1686.83255 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.296 1 88.296 87.796 88.796 0 0 0 0 0.00042874 1 53238 66.989 48.852 1 4667 873 1743 1793 7307 7307 DGLDYILGALESGK 14 1 0 Unmodified _DGLDYILGALESGK_ 0 0 0 Q5C9Z4 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.8828 2 725.874839 1449.73512 74144.04 0.95572 0.00069373 -0.26082 -0.00018932 0.6949 0.00050441 725.874723117841 730.382233028152 132.86 0.46751 132.86 132.72 133.19 0 69 22 5 0 0 0 0.00014514 1 89134 77.593 71.003 1 0.71566 0.75842 0 4154700 2279300 1875400 4668 1805 1744 1794 7308 7308 DGLEVAVLPHNIR 13 0 1 Unmodified _DGLEVAVLPHNIR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.8993 2 716.898983 1431.78341 73814.84 0.39367 0.00028222 0.026145 1.8743E-05 0.41982 0.00030097 716.89914736498 721.903135152294 89.443 0.84503 89.443 88.929 89.774 0 310 71 6 0 0 0 1.3034E-10 1 53912 125.18 112.63 1 1.0333 1.0994 0 43071000 19870000 23201000 4669 1741 1745 1795 7309 7309 DGLEVAVLPHNIR 13 0 1 Unmodified _DGLEVAVLPHNIR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.9042 2 716.898983 1431.78341 71914.6 0.65564 0.00047003 0.11869 8.5086E-05 0.77433 0.00055511 716.899077412776 721.903205822262 88.263 0.57214 88.263 87.932 88.504 0 229 52 6 0 0 0 1.6302E-13 2 54330 130.98 90.393 1 1.0938 1.2485 0 92474000 49330000 43144000 4670 1741 1745 1795 7310;7311 7310 DGLEVAVLPHNIR 13 0 1 Unmodified _DGLEVAVLPHNIR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 716.8996 2 716.898983 1431.78341 71959.31 0.59116 0.0004238 0.21095 0.00015123 0.80211 0.00057503 716.899088085578 721.903252498812 101.67 0.64449 101.67 101.36 102.01 0 244 41 9 0 0 0 0.00015376 2 57549 85.377 75.722 1 1.3847 1.1903 0 44384000 18945000 25439000 4671 1741 1745 1795 7312;7313 7313 DGLEVAVLPHNIR 13 0 1 Unmodified _DGLEVAVLPHNIR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.9035 2 716.898983 1431.78341 71970.2 0.58487 0.00041929 0.13894 9.9605E-05 0.72381 0.0005189 716.899055985553 721.903210709824 101.47 0.61378 101.47 101.15 101.76 0 242 40 10 0 0 0 7.9327E-05 2 56527 94.297 66.092 1 1.3314 1.1614 0 42849000 19145000 23704000 4672 1741 1745 1795 7314;7315 7314 DGLGGLPDIVR 11 0 1 Unmodified _DGLGGLPDIVR_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.3135 2 556.308938 1110.60332 NaN NaN NaN -0.0054286 -3.02E-06 NaN NaN NaN NaN 104.38 0.74213 104.38 103.97 104.71 -7.6294E-06 0 0 0 9.6497E-05 1 64497 93.178 75.938 1 NaN NaN 0 10692000 0 10692000 4673 613 1746 1796 7316 7316 DGLIVETLTVGCK 13 1 0 Unmodified _DGLIVETLTVGCK_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2;E7EV75;E9PE09 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.8813 2 702.873785 1403.73302 NaN NaN NaN -0.14421 -0.00010136 NaN NaN NaN NaN 105.78 0.54075 105.78 105.56 106.1 7.6294E-06 0 0 0 0.0036336 1 67345 64.439 38.5 1 NaN NaN 0 5847800 0 5847800 4674 1758 1747 1797 7317 7317 DGLIVETLTVGCK 13 1 0 Unmodified _DGLIVETLTVGCK_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2;E7EV75;E9PE09 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.8751 2 702.873785 1403.73302 73168.3 0.77375 0.00054385 -0.21253 -0.00014938 0.56123 0.00039447 702.873619087271 706.880791964175 117.52 0.68954 117.52 117.29 117.98 -7.6294E-06 119 31 6 0 0 0 0.0067183 2 69262 45.879 36.192 1 1.7327 1.3727 0 4890100 1656800 3233300 4675 1758 1747 1797 7318;7319 7319 DGLIVETLTVGCK 13 1 0 Unmodified _DGLIVETLTVGCK_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2;E7EV75;E9PE09 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 707.3838 2 702.873785 1403.73302 73625.96 0.54223 0.00038112 0.014782 1.039E-05 0.55702 0.00039151 702.873627114988 706.880940665554 117.41 0.61909 117.41 117.15 117.76 0 113 29 6 0 0 0 0.0025719 2 68190 53.211 43.524 1 1.8025 1.4773 0 5021800 1898700 3123200 4676 1758 1747 1797 7320;7321 7320 DGLLDDEEFALANHLIK 17 1 0 Unmodified _DGLLDDEEFALANHLIK_ 0 0 0 B2R5U3;A0A024R571;Q9H4M9;B4DMV9;B4DR44;B4DTR4 B2R5U3 B2R5U3 EHD1 EH domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3325 3 638.326546 1911.95781 80576.02 0.63871 0.00040771 -0.082599 -5.2725E-05 0.55612 0.00035498 638.660847218052 640.997989351036 119.05 0.35182 119.05 118.89 119.24 -7.6294E-06 81 23 6 0 0 0 0.00032184 1 78421 40.187 40.187 1 3.5638 3.6018 0 8620400 1662300 6958200 4677 172 1748 1798 7322 7322 DGLSEAAAQSR 11 0 1 Unmodified _DGLSEAAAQSR_ 0 0 0 Q13057 Q13057 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.7685 2 552.767634 1103.52072 83839.12 0.87052 0.0004812 1.45 0.00080151 2.3205 0.0012827 552.768289230104 557.772479921533 26.143 0.4335 26.143 25.905 26.338 0 67 25 4 0 0 0 0.00041914 1 11675 79.974 79.974 1 1.2772 1.2766 0 8870400 3966800 4903600 4678 1704 1749 1799 7323 7323 DGLVSLLTTSEGADEPQR 18 0 1 Unmodified _DGLVSLLTTSEGADEPQR_ 0 0 0 Q71UH7;V9HWE7;P51570;K7ERJ9;B4E1A8 Q71UH7 Q71UH7 GALK1;HEL-S-19 Galactokinase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 949.474 2 944.468352 1886.92215 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.05 1 111.05 110.55 111.55 0 0 0 0 1.5935E-14 1 69843 108.17 86.94 1 4679 1596 1750 1800 7324 7324 DGMDNQGGYGSVGR 14 0 1 Oxidation (M) _DGM(ox)DNQGGYGSVGR_ DGM(1)DNQGGYGSVGR DGM(100.55)DNQGGYGSVGR 0 1 0 Q53F48;A0A024QZK8;P31942;A0A024QZP1;B4DHY1 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.2991 2 714.794054 1427.57356 73369.46 0.34236 0.00024472 0.24656 0.00017624 0.58892 0.00042095 714.794249556643 719.798368780214 21.831 0.28092 21.831 21.69 21.971 0 63 17 6 0 0 0 1.9897E-06 1 7966 100.55 97.06 1 2.8772 2.8588 0 8204500 2132900 6071700 4680 23 1751 1801 7325 7325 10 DGNASGTTLLEALDCILPPTRPTDK 25 1 1 Unmodified _DGNASGTTLLEALDCILPPTRPTDK_ 0 0 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q6P4C9;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.1157 3 885.781325 2654.32215 63419.7 0.98158 0.00086947 -0.41711 -0.00036947 0.56447 0.0005 886.115943123 892.122729941 131.35 1.6273 131.35 130.8 132.43 0 1146 108 19 0 0 0 4.5058E-36 4 85510 130.65 130.65 1 2.2503 2.7575 0 1548700000 472600000 1076100000 4681 1658;1790 1752 1802 7326;7327;7328;7329 7326 DGNASGTTLLEALDCILPPTRPTDK 25 1 1 Unmodified _DGNASGTTLLEALDCILPPTRPTDK_ 0 0 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q6P4C9;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.1167 3 885.781325 2654.32215 63230.8 0.73417 0.00065032 -0.22311 -0.00019763 0.51106 0.00045269 886.116269622272 892.122888800207 130.93 1.6919 130.93 130.39 132.08 0 927 121 15 0 0 0 1.6159E-27 3 87314 115.01 108.93 1 2.2681 2.719 0 1518400000 481940000 1036500000 4682 1658;1790 1752 1802 7330;7331;7332 7330 DGNGYISAAELR 12 0 1 Unmodified _DGNGYISAAELR_ 0 0 0 Q9BRL5;P0DP25;P0DP24;P0DP23;B4DJ51;B2RDW0;H0Y7A7;E7ETZ0;E7EMB3;G3V361;Q96HY3 Q9BRL5 Q9BRL5 CALM3;CALM2;CALM1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3103 2 633.309666 1264.60478 NaN NaN NaN -0.0062453 -3.9552E-06 NaN NaN NaN NaN 70.777 0.72803 70.777 70.543 71.271 0 0 0 0 0.027591 1 41159 48.442 34.305 1 NaN NaN 0 8247400 8247400 0 4683 890 1753 1803 7333 7333 DGNGYISAAELR 12 0 1 Unmodified _DGNGYISAAELR_ 0 0 0 Q9BRL5;P0DP25;P0DP24;P0DP23;B4DJ51;B2RDW0;H0Y7A7;E7ETZ0;E7EMB3;G3V361;Q96HY3 Q9BRL5 Q9BRL5 CALM3;CALM2;CALM1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3097 2 633.309666 1264.60478 NaN NaN NaN 0.17637 0.0001117 NaN NaN NaN NaN 69.813 0.78478 69.813 69.442 70.227 0 0 0 0 0.006454 1 41651 60.305 46.168 1 NaN NaN 0 9552300 9552300 0 4684 890 1753 1803 7334 7334 DGNLHEGDIILK 12 1 0 Unmodified _DGNLHEGDIILK_ 0 0 0 B7Z2R3;A0A024R225;B7Z954;A0A024R233;A0A1B0GTW1;Q9UDY2 B7Z2R3 B7Z2R3 TJP2 Tight junction protein ZO-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3549 2 662.348791 1322.68303 77415.84 0.95633 0.00063342 -0.67648 -0.00044806 0.27985 0.00018536 662.850007200396 666.355302497976 58.631 0.18791 58.631 58.492 58.68 -3.8147E-06 31 18 4 0 0 0 0.00035008 1 34073 72.289 37.757 1 3.0725 3.1173 0 12852000 3150500 9701800 4685 101 1754 1804 7335 7335 DGNPDNETYLHR 12 0 1 Unmodified _DGNPDNETYLHR_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;Q9HBZ9;Q7Z4W5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.8232 2 715.818387 1429.62222 71416.63 1.0237 0.0007328 0.44002 0.00031497 1.4637 0.0010478 715.818372625312 720.822699303805 26.116 0.35283 26.116 25.96 26.313 0 102 20 7 0 0 0 7.0162E-09 2 11594 143.28 138.98 1 2.4554 2.496 0 29469000 8532400 20937000 4686 593 1755 1805 7336;7337 7336 DGNPDNETYLHR 12 0 1 Unmodified _DGNPDNETYLHR_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;Q9HBZ9;Q7Z4W5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.8199 2 715.818387 1429.62222 72102.49 0.59448 0.00042554 0.092198 6.5997E-05 0.68668 0.00049154 715.818188771121 720.822546267466 25.815 0.38003 25.815 25.607 25.987 0 131 26 7 0 0 0 2.2866E-05 2 11331 102.06 102.06 1 2.6584 3.0578 0 53377000 16662000 36715000 4687 593 1755 1805 7338;7339 7339 DGNPDNETYLHR 12 0 1 Unmodified _DGNPDNETYLHR_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;Q9HBZ9;Q7Z4W5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.8839 3 477.548017 1429.62222 89094.05 0.063369 3.0262E-05 -0.18482 -8.8262E-05 -0.12146 -5.8001E-05 477.547964990697 480.884042499756 25.798 0.33913 25.798 25.647 25.987 0 68 24 4 0 0 0 0.037738 1 11312 22.885 20.746 1 2.4121 2.4193 0 17637000 4344300 13292000 4688 593 1755 1805 7340 7340 DGPGETDAFGNSEGK 15 1 0 Unmodified _DGPGETDAFGNSEGK_ 0 0 0 A8K132;O94925;Q53TX0 A8K132 A8K132 GLS Glutaminase kidney isoform, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.8198 2 740.812967 1479.61138 NaN NaN NaN 0.19704 0.00014597 NaN NaN NaN NaN 34.514 0.36282 34.514 34.294 34.657 3.8147E-06 0 0 0 0.010064 1 17263 51.013 44.324 1 NaN NaN 0 6468800 0 6468800 4689 701 1756 1806 7341 7341 DGPGETDAFGNSEGK 15 1 0 Unmodified _DGPGETDAFGNSEGK_ 0 0 0 A8K132;O94925;Q53TX0 A8K132 A8K132 GLS Glutaminase kidney isoform, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8216 2 740.812967 1479.61138 NaN NaN NaN 0.42377 0.00031393 NaN NaN NaN NaN 33.85 0.18889 33.85 33.726 33.915 0 0 0 0 0.00032576 1 17064 75.088 68.234 1 NaN NaN 0 3435500 0 3435500 4690 701 1756 1806 7342 7342 DGPGFYTTR 9 0 1 Unmodified _DGPGFYTTR_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2425 2 507.237981 1012.46141 85849.98 0.58065 0.00029453 0.14546 7.3784E-05 0.72611 0.00036831 507.238085925171 512.242097060239 42.164 0.7109 42.164 41.745 42.456 0 211 51 6 0 0 0 0.021253 2 22270 49.536 39.122 1 1.1686 1.2555 0 46998000 22836000 24163000 4691 1228 1757 1807 7343;7344 7343 DGPLNMILDDGGDLTNLIHTK 21 1 0 Oxidation (M) _DGPLNM(ox)ILDDGGDLTNLIHTK_ DGPLNM(1)ILDDGGDLTNLIHTK DGPLNM(46.58)ILDDGGDLTNLIHTK 0 1 0 P23526 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.7161 3 756.71073 2267.11036 72035.63 0.89976 0.00068086 -0.037419 -2.8316E-05 0.86234 0.00065254 757.045236500615 759.716242444185 125.6 0.35692 125.6 125.34 125.69 0 87 24 7 0 0 0 6.7887E-06 1 83618 46.578 46.578 1 1.9517 1.9329 0 5899300 1748400 4150900 4692 1512 1758 1808 7345 7345 1283 DGPPHQVLVVPLHSR 15 0 1 Unmodified _DGPPHQVLVVPLHSR_ 0 0 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.9744 3 550.974001 1649.90017 81395.98 0.48645 0.00026802 -0.085526 -4.7123E-05 0.40093 0.0002209 551.308207354644 554.309802618663 73.78 0.74509 73.78 73.428 74.173 0 276 53 8 0 0 0 0.00089901 1 39043 32.815 32.815 1 0.56192 0.48014 0 5790100 3750300 2039800 4693 1776 1759 1809 7346 7346 DGPPHQVLVVPLHSR 15 0 1 Unmodified _DGPPHQVLVVPLHSR_ 0 0 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.9741 3 550.974001 1649.90017 82730.05 0.48381 0.00026657 -0.37517 -0.00020671 0.10864 5.9857E-05 551.308024843135 554.644260221323 73.939 0.60736 73.939 73.66 74.268 0 261 46 8 0 0 0 0.0013303 1 38332 28.032 28.032 1 0.57357 0.48298 0 4788800 2807400 1981400 4694 1776 1759 1809 7347 7347 DGQAMLWDLNEGK 13 1 0 Oxidation (M) _DGQAM(ox)LWDLNEGK_ DGQAM(1)LWDLNEGK DGQAM(142.08)LWDLNEGK 0 1 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;D6R9Z1;H0YAM7;D6R9L0;D6REE5;D6RFX4;H0Y8R5 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.8476 2 746.840473 1491.66639 70982.55 0.58684 0.00043827 -0.95013 -0.00070959 -0.36329 -0.00027132 747.340720828759 750.847074979539 83.404 1.5645 83.404 82.858 84.423 -7.6294E-06 467 128 7 0 0 0 4.7765E-19 1 49855 142.08 140.49 1 1.1108 1.2047 0 45026000 23046000 21980000 4695 1227 1760 1810 7348 7348 938 DGQILPVPNVVVR 13 0 1 Unmodified _DGQILPVPNVVVR_ 0 0 0 A5PLK7;A0A024RAC5;Q9P258 A5PLK7 A5PLK7 RCC2 Protein RCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.4157 2 703.411726 1404.8089 75705.84 1.0051 0.00070697 -0.69882 -0.00049156 0.30624 0.00021541 703.411421269383 708.415551855187 111.87 0.41317 111.87 111.64 112.06 0 111 29 5 0 0 0 0.010469 1 72221 51.092 51.092 1 0.82136 0.83016 0 9846500 5613000 4233500 4696 301 1761 1811 7349 7349 DGQILPVPNVVVR 13 0 1 Unmodified _DGQILPVPNVVVR_ 0 0 0 A5PLK7;A0A024RAC5;Q9P258 A5PLK7 A5PLK7 RCC2 Protein RCC2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.4162 2 703.411726 1404.8089 73626.38 0.93006 0.00065422 -0.096437 -6.7835E-05 0.83362 0.00058638 703.411716100308 708.415720806705 123.34 0.45209 123.34 123.11 123.56 0 85 18 7 0 0 0 0.03394 1 73662 40.589 35.491 1 0.67044 0.56778 0 5005300 3093400 1911900 4697 301 1761 1811 7350 7350 DGQVINETSQHHDDLE 16 0 0 Unmodified _DGQVINETSQHHDDLE_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 919.4051 2 918.903376 1835.7922 NaN NaN NaN 0.085588 7.8647E-05 NaN NaN NaN NaN 36.331 0.68954 36.331 36.042 36.731 0 0 0 0 5.1075E-09 1 18203 102.62 98.28 1 4698 1457 1762 1812 7351 7351 DGQVINETSQHHDDLE 16 0 0 Unmodified _DGQVINETSQHHDDLE_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.9387 3 612.938009 1835.7922 NaN NaN NaN -0.11488 -7.0413E-05 NaN NaN NaN NaN 36.278 0.79334 36.278 36.024 36.817 0 0 0 0 0.00047835 1 18295 46.892 45.747 1 4699 1457 1762 1812 7352 7352 DGQVINETSQHHDDLE 16 0 0 Unmodified _DGQVINETSQHHDDLE_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 918.9034 2 918.903376 1835.7922 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.004 1 42.004 41.504 42.504 0 0 0 0 0.019236 1 22236 43.382 36.941 1 4700 1457 1762 1812 7353 7353 DGQVINETSQHHDDLE 16 0 0 Unmodified _DGQVINETSQHHDDLE_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.4056 2 918.903376 1835.7922 NaN NaN NaN -0.021642 -1.9886E-05 NaN NaN NaN NaN 35.346 0.79382 35.346 35.12 35.914 0 0 0 0 5.2957E-36 2 18221 154.28 148.9 1 4701 1457 1762 1812 7354;7355 7355 DGQVINETSQHHDDLE 16 0 0 Unmodified _DGQVINETSQHHDDLE_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.2725 3 612.938009 1835.7922 NaN NaN NaN -0.084069 -5.1529E-05 NaN NaN NaN NaN 35.411 0.80684 35.411 35.107 35.914 -3.8147E-06 0 0 0 4.7064E-07 1 17982 79.022 76.595 1 4702 1457 1762 1812 7356 7356 DGQVINETSQHHDDLE 16 0 0 Unmodified _DGQVINETSQHHDDLE_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.9385 3 612.938009 1835.7922 NaN NaN NaN 0.060042 3.6802E-05 NaN NaN NaN NaN 41.327 0.31569 41.327 41.107 41.423 0 0 0 0 0.0082381 1 22197 34.395 28.232 1 4703 1457 1762 1812 7357 7357 DGQVINETSQHHDDLE 16 0 0 Unmodified _DGQVINETSQHHDDLE_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.9044 2 918.903376 1835.7922 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.179 1 41.179 40.679 41.679 -3.8147E-06 0 0 0 0.0031391 1 22111 54.343 47.901 1 4704 1457 1762 1812 7358 7358 DGQVINETSQHHDDLE 16 0 0 Unmodified _DGQVINETSQHHDDLE_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.938 3 612.938009 1835.7922 NaN NaN NaN 0.11244 6.8916E-05 NaN NaN NaN NaN 42.2 0.92776 42.2 41.86 42.788 0 0 0 0 5.9751E-13 1 19078 85.734 80.191 1 4705 1457 1762 1812 7359 7359 DGQYILATGTYKPR 14 1 1 Unmodified _DGQYILATGTYKPR_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.9271 2 791.91483 1581.81511 69205.38 0.62845 0.00049768 -0.045856 -3.6314E-05 0.58259 0.00046136 791.914684052052 800.925882783509 61.914 0.5017 61.914 61.742 62.244 0 186 40 6 0 0 0 0.00072702 3 35446 75.819 75.819 1 1.1556 1.3098 0 23731000 9902400 13828000 4706 2000 1763 1813 7360;7361;7362 7362 DGQYILATGTYKPR 14 1 1 Unmodified _DGQYILATGTYKPR_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.9273 2 791.91483 1581.81511 71566.55 0.39361 0.0003117 -0.26266 -0.00020801 0.13094 0.0001037 791.914672456412 800.925772410009 60.666 0.7351 60.666 60.256 60.991 3.8147E-06 162 55 4 0 0 0 0.0070671 4 35358 56.087 56.087 1 0.93372 1.0517 0 13900000 6956500 6943000 4707 2000 1763 1813 7363;7364;7365;7366 7365 DGQYILATGTYKPR 14 1 1 Unmodified _DGQYILATGTYKPR_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.9159 2 791.91483 1581.81511 68420.11 0.35001 0.00027718 0.39901 0.00031598 0.74902 0.00059316 791.915115029619 800.926356998266 71.22 0.72186 71.22 70.888 71.61 0 317 47 9 0 0 0 0.024565 1 37406 45.257 45.257 1 1.5845 1.3823 0 22521000 8641100 13880000 4708 2000 1763 1813 7367 7367 DGQYILATGTYKPR 14 1 1 Unmodified _DGQYILATGTYKPR_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.9153 2 791.91483 1581.81511 67962.27 0.16001 0.00012671 0.57172 0.00045276 0.73173 0.00057947 791.915139334129 800.926508728352 71.739 0.70572 71.739 71.369 72.075 0 314 46 9 0 0 0 0.032377 1 36892 42.809 42.809 1 1.5574 1.3212 0 19412000 8235300 11177000 4709 2000 1763 1813 7368 7368 DGSAFEDGLR 10 0 1 Unmodified _DGSAFEDGLR_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.7477 2 533.743628 1065.4727 NaN NaN NaN -0.20522 -0.00010953 NaN NaN NaN NaN 53.348 0.52491 53.348 53.144 53.669 0 0 0 0 9.6582E-05 1 29792 96.948 86.074 1 NaN NaN 0 23907000 0 23907000 4710 5 1764 1814 7369 7369 DGSAFEDGLR 10 0 1 Unmodified _DGSAFEDGLR_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.7493 2 533.743628 1065.4727 82530.23 0.70661 0.00037715 0.18116 9.6692E-05 0.88776 0.00047384 533.743755803452 538.747707645168 52.077 0.77576 52.077 51.895 52.67 0 172 58 4 0 0 0 7.8785E-05 2 29589 98.033 87.619 1 1.8244 1.954 0 25128000 8544600 16584000 4711 5 1764 1814 7370;7371 7370 DGSCGVAYVVQEPGDYEVSVK 21 1 0 Unmodified _DGSCGVAYVVQEPGDYEVSVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5C6;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1133.5275 2 1129.51772 2257.02088 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.678 1 96.678 96.178 97.178 7.6294E-06 0 0 0 0.027601 1 60315 36.445 24.085 1 4712 1504 1765 1815 7372 7372 DGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFK 33 1 0 Unmodified _DGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1197.2246 3 1193.88395 3578.63001 54671.63 -0.045356 -5.4149E-05 0.16355 0.00019526 0.1182 0.00014111 1194.55026807712 1196.8905873232 127.16 0.3844 127.16 126.92 127.3 -7.6294E-06 71 16 7 0 0 0 0.00025494 1 76586 26.493 26.493 1 2.4848 1.9882 0 7149500 2193000 4956600 4713 1504 1766 1816 7373 7373 DGSLASNPYSGDLTK 15 1 0 Unmodified _DGSLASNPYSGDLTK_ 0 0 0 B4DZJ6;B4DYY5;F8W726;Q14157;H0Y5H6;H7C2T8 B4DZJ6 B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.871 2 762.86246 1523.71037 NaN NaN NaN 0.54409 0.00041506 NaN NaN NaN NaN 66.772 0.44362 66.772 66.565 67.009 0 0 0 0 0.037474 1 38661 39.179 32.646 1 NaN NaN 0 5618600 0 5618600 4714 1052 1767 1817 7374 7374 DGSLEDDEDEEDDLDEGVGGK 21 1 0 Unmodified _DGSLEDDEDEEDDLDEGVGGK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1119.9392 2 1119.43804 2236.86152 58111.27 -0.06697 -7.4969E-05 0.30058 0.00033648 0.23361 0.00026151 1119.43838751049 1123.94709939545 68.774 0.49368 68.774 68.524 69.018 0 181 42 6 0 0 0 3.8164E-09 2 39768 85.837 85.837 1 0.90397 0.93905 0 11424000 5751100 5673400 4715 1699 1768 1818 7375;7376 7376 DGSLEDDEDEEDDLDEGVGGK 21 1 0 Unmodified _DGSLEDDEDEEDDLDEGVGGK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1119.9377 2 1119.43804 2236.86152 59229.31 0.13078 0.00014639 0.22679 0.00025388 0.35757 0.00040027 1119.43825672451 1123.946976932 68.073 0.54712 68.073 67.802 68.349 0 185 45 6 0 0 0 2.5796E-15 3 40301 102.52 102.52 1 0.99218 1.0031 0 13133000 5190400 7942300 4716 1699 1768 1818 7377;7378;7379 7379 DGSLIVSSSYDGLCR 15 0 1 Unmodified _DGSLIVSSSYDGLCR_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.883 2 814.882869 1627.75119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.461 1 88.461 87.961 88.961 0 0 0 0 3.7816E-11 1 54557 108.35 82.41 1 4717 1630 1769 1819 7380 7380 DGSLIVSSSYDGLCR 15 0 1 Unmodified _DGSLIVSSSYDGLCR_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.8883 2 814.882869 1627.75119 65632.43 0.55332 0.00045089 0.18723 0.00015257 0.74055 0.00060346 814.883444083937 819.886832407331 101.68 0.75719 101.68 101.23 101.99 0 208 50 7 0 0 0 0.00018957 1 57489 77.062 62.643 1 1.652 1.3949 0 9584600 3873100 5711500 4718 1630 1769 1819 7381 7381 DGSLIVSSSYDGLCR 15 0 1 Unmodified _DGSLIVSSSYDGLCR_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 814.8842 2 814.882869 1627.75119 67796.73 0.58178 0.00047408 -0.01417 -1.1547E-05 0.56761 0.00046253 814.883117245857 819.886810493907 101.6 0.64705 101.6 101.28 101.93 0 205 45 6 0 0 0 1.1405E-05 2 56790 91.937 82.749 1 1.707 1.422 0 6963500 2836200 4127300 4719 1630 1769 1819 7382;7383 7383 DGTGVVEFVR 10 0 1 Unmodified _DGTGVVEFVR_ 0 0 0 J3KTL2;Q07955;Q59FA2;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.7844 2 539.780013 1077.54547 81308.65 0.45751 0.00024695 -0.16739 -9.0352E-05 0.29012 0.0001566 539.77993913551 544.783977539585 77.21 1.3223 77.21 76.679 78.001 0 651 109 9 0 0 0 1.6945E-09 3 45856 130.75 104.85 1 1.2664 1.4942 0 246280000 110180000 136100000 4720 1333 1770 1820 7384;7385;7386 7386 DGTGVVEFVR 10 0 1 Unmodified _DGTGVVEFVR_ 0 0 0 J3KTL2;Q07955;Q59FA2;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.7841 2 539.780013 1077.54547 81400.38 0.27029 0.0001459 0.16985 9.1683E-05 0.44014 0.00023758 539.780069737022 544.784221878672 76.212 1.2422 76.212 75.726 76.968 0 584 104 8 0 0 0 0.00019263 2 45771 94.309 78.647 1 1.3074 1.5165 0 319310000 137070000 182240000 4721 1333 1770 1820 7387;7388 7387 DGTGVVEFVR 10 0 1 Unmodified _DGTGVVEFVR_ 0 0 0 J3KTL2;Q07955;Q59FA2;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.7835 2 539.780013 1077.54547 81596.89 0.512 0.00027637 -0.020048 -1.0821E-05 0.49195 0.00026555 539.779963292764 544.784083394652 87.403 1.005 87.403 86.978 87.983 7.6294E-06 286 58 7 0 0 0 0.055642 2 47908 35.511 26.979 1 0.7513 0.62842 0 24340000 13340000 11000000 4722 1333 1770 1820 7389;7390 7389 DGTGVVEFVR 10 0 1 Unmodified _DGTGVVEFVR_ 0 0 0 J3KTL2;Q07955;Q59FA2;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.7802 2 539.780013 1077.54547 82592.63 0.53068 0.00028645 0.076296 4.1183E-05 0.60698 0.00032763 539.779970369966 544.784136933014 87.523 1.0833 87.523 87.16 88.243 0 312 63 8 0 0 0 0.0036847 2 47210 63.397 47.735 1 0.73398 0.62625 0 19996000 11715000 8281500 4723 1333 1770 1820 7391;7392 7391 DGTIDFTPGSELLITK 16 1 0 Unmodified _DGTIDFTPGSELLITK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.9549 2 853.945992 1705.87743 65599.09 0.80173 0.00068463 -0.1754 -0.00014978 0.62633 0.00053485 853.946068112707 857.952416916068 116.48 0.86494 116.48 116.09 116.96 0 247 49 8 0 0 0 0.0046479 1 76016 36.284 27.771 1 1.5794 1.7676 0 53896000 23190000 30706000 4724 1088;1189 1771 1821 7393 7393 DGTIDFTPGSELLITK 16 1 0 Unmodified _DGTIDFTPGSELLITK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 857.9536 2 853.945992 1705.87743 64920.7 1.1736 0.0010022 0.13999 0.00011954 1.3136 0.0011217 854.447291444526 857.952787728221 128.24 0.78527 128.24 127.95 128.74 0 135 32 8 0 0 0 0.00015486 1 77339 71.268 53.901 1 1.5698 1.2158 0 13149000 5130600 8018400 4725 1088;1189 1771 1821 7394 7394 DGTLKPGDTIIEPTSGNTGIGLALAAAVR 29 1 1 Unmodified _DGTLKPGDTIIEPTSGNTGIGLALAAAVR_ 0 0 1 C9JMA6;B7Z6W5;Q9NTF0;B7Z2D6;P0DN79;P35520 C9JMA6 C9JMA6 CBS;DKFZp727E011 Cystathionine beta-synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.1837 3 936.841572 2807.50289 NaN NaN NaN -0.11576 -0.00010845 NaN NaN NaN NaN 120.58 0.37006 120.58 120.43 120.8 0 0 0 0 5.2221E-06 1 77791 42.659 36.999 1 NaN NaN 0 7345500 0 7345500 4726 1086 1772 1822 7395 7395 DGTLKPGDTIIEPTSGNTGIGLALAAAVR 29 1 1 Unmodified _DGTLKPGDTIIEPTSGNTGIGLALAAAVR_ 0 0 1 C9JMA6;B7Z6W5;Q9NTF0;B7Z2D6;P0DN79;P35520 C9JMA6 C9JMA6 CBS;DKFZp727E011 Cystathionine beta-synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 942.8499 3 936.841572 2807.50289 NaN NaN NaN -0.28882 -0.00027058 NaN NaN NaN NaN 120.1 0.3645 120.1 119.94 120.31 0 0 0 0 9.7907E-07 1 79293 52.824 47.205 1 NaN NaN 0 6500700 0 6500700 4727 1086 1772 1822 7396 7396 DGTSPEEEIEIER 13 0 1 Unmodified _DGTSPEEEIEIER_ 0 0 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.3445 2 752.3441 1502.67365 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.318 1 67.318 66.818 67.818 0 0 0 0 0.00015781 1 38901 91.937 75.305 1 4728 2033 1773 1823 7397 7397 DGTSPEEEIEIER 13 0 1 Unmodified _DGTSPEEEIEIER_ 0 0 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.3492 2 752.3441 1502.67365 69715.88 0.65515 0.0004929 -0.13687 -0.00010298 0.51828 0.00038992 752.343858174573 757.348018308689 66.419 0.63669 66.419 66.075 66.712 0 152 51 4 0 0 0 0.00010772 2 39226 91.937 82.749 1 1.0825 1.0882 0 19240000 9881600 9358000 4729 2033 1773 1823 7398;7399 7399 DGTSPEEEIEIER 13 0 1 Unmodified _DGTSPEEEIEIER_ 0 0 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.348 2 752.3441 1502.67365 69627.9 0.52095 0.00039193 0.083095 6.2516E-05 0.60404 0.00045445 752.344162564389 757.348305355434 77.097 0.68842 77.097 76.777 77.465 0 152 45 5 0 0 0 0.051604 1 41124 28.903 27.998 1 1.5233 1.3052 0 6102600 2240200 3862300 4730 2033 1773 1823 7400 7400 DGTTHQTSLELFMYLNEVAGK 21 1 0 Oxidation (M) _DGTTHQTSLELFM(ox)YLNEVAGK_ DGTTHQTSLELFM(1)YLNEVAGK DGTTHQTSLELFM(62.36)YLNEVAGK 0 1 0 Q5T6L4;P00966;A8KAP9;B4E395 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.7201 3 790.714252 2369.12093 NaN NaN NaN -0.08039 -6.3566E-05 NaN NaN NaN NaN 122.48 0.59371 122.48 122.23 122.82 0 0 0 0 4.4677E-06 1 79246 62.362 57.384 1 NaN NaN 0 6552600 0 6552600 4731 1437 1774 1824 7401 7401 1136 DGTTHQTSLELFMYLNEVAGK 21 1 0 Oxidation (M) _DGTTHQTSLELFM(ox)YLNEVAGK_ DGTTHQTSLELFM(1)YLNEVAGK DGTTHQTSLELFM(48.35)YLNEVAGK 0 1 0 Q5T6L4;P00966;A8KAP9;B4E395 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.388 3 790.714252 2369.12093 NaN NaN NaN -0.26489 -0.00020945 NaN NaN NaN NaN 121.9 0.63319 121.9 121.63 122.26 0 0 0 0 0.00045327 1 80688 48.354 44.326 1 NaN NaN 0 6561500 0 6561500 4732 1437 1774 1824 7402 7402 1136 DGVFLYFEDNAGVIVNNK 18 1 0 Unmodified _DGVFLYFEDNAGVIVNNK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1007.4979 2 1007.49945 2012.98436 60449.91 0.56451 0.00056874 -0.3523 -0.00035494 0.21221 0.0002138 1007.49891972613 1012.00794604092 133 0.27768 133 132.88 133.16 0 40 10 6 0 0 0 7.3218E-17 1 86967 122.34 122.34 1 0.71151 0.69741 0 22462000 13331000 9131200 4733 84 1775 1825 7403 7403 DGVFLYFEDNAGVIVNNK 18 1 0 Unmodified _DGVFLYFEDNAGVIVNNK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1008.002 2 1007.49945 2012.98436 59594.75 0.6683 0.00067331 -0.50021 -0.00050396 0.16808 0.00016934 1008.00012418708 1011.50644906018 132.97 0.49489 132.97 132.77 133.26 -1.5259E-05 106 21 10 0 0 0 1.1666E-63 2 89139 178.32 178.32 1 0.85225 0.93048 0 40241000 22307000 17933000 4734 84 1775 1825 7404;7405 7404 DGVFLYFEDNAGVIVNNK 18 1 0 Unmodified _DGVFLYFEDNAGVIVNNK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1011.5074 2 1007.49945 2012.98436 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.6 1 123.6 123.1 124.1 0 0 0 0 0.0057633 1 82106 48.659 36.099 1 4735 84 1775 1825 7406 7406 DGVFLYFEDNAGVIVNNK 18 1 0 Unmodified _DGVFLYFEDNAGVIVNNK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1012.0083 2 1007.49945 2012.98436 NaN NaN NaN 0.079241 7.9836E-05 NaN NaN NaN NaN 134.49 0.30186 134.49 134.36 134.66 0 0 0 0 5.1484E-53 1 81253 159.64 144.76 1 NaN NaN 0 46899000 0 46899000 4736 84 1775 1825 7407 7407 DGVGMVEYLR 10 0 1 Oxidation (M) _DGVGM(ox)VEYLR_ DGVGM(1)VEYLR DGVGM(72.64)VEYLR 0 1 0 Q13242;A8K3M9;H0YIB4 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.7838 2 577.779156 1153.54376 80833.81 0.56337 0.0003255 0.76711 0.00044322 1.3305 0.00076872 577.778924314422 582.783568138444 64.65 0.58667 64.65 64.299 64.886 0 154 52 5 0 0 0 0.00080379 1 38052 72.643 61.933 1 2.2422 2.2446 0 17099000 3863000 13236000 4737 1709 1776 1826 7408 7408 1541 DGVIEASINHEK 12 1 0 Unmodified _DGVIEASINHEK_ 0 0 0 O95325;B3KNN7;B4DEB0;B4DPM7;Q96N86;B4DV84;Q8N9M2;Q6IBN0;O43242 O95325 O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.3388 2 656.330598 1310.64664 75345.18 1.0248 0.00067262 -0.088719 -5.8229E-05 0.9361 0.00061439 656.330285001822 660.337783933321 38.834 0.30744 38.834 38.661 38.968 0 64 24 4 0 0 0 0.00021299 2 20015 89.171 76.08 1 1.5785 1.5706 0 8013800 2876700 5137100 4738 916 1777 1827 7409;7410 7410 DGVIEASINHEK 12 1 0 Unmodified _DGVIEASINHEK_ 0 0 0 O95325;B3KNN7;B4DEB0;B4DPM7;Q96N86;B4DV84;Q8N9M2;Q6IBN0;O43242 O95325 O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3381 2 656.330598 1310.64664 NaN NaN NaN 0.29204 0.00019167 NaN NaN NaN NaN 37.775 0.24995 37.775 37.646 37.896 -3.8147E-06 0 0 0 0.0080792 1 19653 57.347 38.567 1 NaN NaN 0 3825800 0 3825800 4739 916 1777 1827 7411 7411 DGVLAYAR 8 0 1 Unmodified _DGVLAYAR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 437.7366 2 432.732335 863.450116 90926.42 -0.28279 -0.00012237 0.98036 0.00042424 0.69757 0.00030186 432.733003021978 437.73652653403 59.786 0.72596 59.786 59.49 60.216 0 217 49 6 0 0 0 0.034605 1 30526 49.358 27.227 1 0.82272 0.70802 0 7158800 3866800 3292000 4740 1741 1778 1828 7412 7412 DGVPEGAQLQGPVHR 15 0 1 Unmodified _DGVPEGAQLQGPVHR_ 0 0 0 A0A024RAV4;A0A024RAQ1;P16989;Q96GD7 A0A024RAV4 A0A024RAV4 CSDA;YBX3 Y-box-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.4022 2 780.399878 1558.7852 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.623 1 45.623 45.123 46.123 3.8147E-06 0 0 0 0.0030378 1 25059 55.401 40.71 1 4741 310 1779 1829 7413 7413 DGVVEITGK 9 1 0 Unmodified _DGVVEITGK_ 0 0 0 V9HW43;P04792;B4DL87 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.2586 2 459.250557 916.486562 87753.5 0.33752 0.00015501 0.16697 7.668E-05 0.50449 0.00023169 459.250624050149 463.257587671237 44.085 0.78369 44.085 43.806 44.59 0 356 70 8 0 0 0 0.0019956 2 23577 78.149 47.645 1 1.3567 1.5892 0 292420000 120280000 172140000 4742 1443 1780 1830 7414;7415 7415 DGVVEITGK 9 1 0 Unmodified _DGVVEITGK_ 0 0 0 V9HW43;P04792;B4DL87 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.4955 1 917.493838 916.486562 63789.1 0.80686 0.00074029 -0.12504 -0.00011472 0.68182 0.00062557 917.493762395712 925.507700768502 44.23 0.30518 44.23 44.177 44.482 0 86 26 4 0 0 0 0.0044063 1 23816 76.679 36.327 1 1.0389 1.1409 0 53736000 26176000 27560000 4743 1443 1780 1830 7416 7416 DGVVEITGK 9 1 0 Unmodified _DGVVEITGK_ 0 0 0 V9HW43;P04792;B4DL87 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 459.2505 2 459.250557 916.486562 89899.91 0.20489 9.4094E-05 0.1137 5.2215E-05 0.31858 0.00014631 459.25055762635 463.257629565374 50.082 1.1682 50.082 49.534 50.702 0 403 96 6 0 0 0 0.026085 1 24450 47.603 32.934 1 1.0541 0.83009 0 5725600 2635800 3089700 4744 1443 1780 1830 7417 7417 DGVVEITGK 9 1 0 Unmodified _DGVVEITGK_ 0 0 0 V9HW43;P04792;B4DL87 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 459.2507 2 459.250557 916.486562 89127.05 -0.20181 -9.2683E-05 0.46367 0.00021294 0.26186 0.00012026 459.250692483862 463.2577916405 50.284 1.0824 50.284 49.861 50.943 0 392 84 6 0 0 0 0.033207 2 24018 44.753 26.767 1 1.0669 0.87492 0 5086400 2382300 2704200 4745 1443 1780 1830 7418;7419 7418 DGVWNLQNEVTK 12 1 0 Unmodified _DGVWNLQNEVTK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.8589 2 701.851698 1401.68884 73141.42 0.80732 0.00056662 0.53242 0.00037368 1.3397 0.0009403 701.851790996653 705.858521087309 86.676 0.63515 86.676 86.369 87.004 0 221 45 7 0 0 0 0.00049783 2 52225 70.1 64.103 1 0.6205 0.60782 0 22231000 13617000 8614800 4746 1854 1781 1831 7420;7421 7420 DGVWNLQNEVTK 12 1 0 Unmodified _DGVWNLQNEVTK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.8598 2 701.851698 1401.68884 74043.7 0.59694 0.00041897 0.47771 0.00033528 1.0747 0.00075425 702.354489980665 705.859015873427 98.933 0.8126 98.933 98.48 99.293 7.6294E-06 199 46 7 0 0 0 0.012659 1 54948 44.847 44.847 1 0.8076 0.63751 0 3219900 1621100 1598800 4747 1854 1781 1831 7422 7422 DGWPAMGIHGDK 12 1 0 Oxidation (M) _DGWPAM(ox)GIHGDK_ DGWPAM(1)GIHGDK DGWPAM(41.4)GIHGDK 0 1 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.3011 2 650.292962 1298.57137 74610.59 0.98435 0.00064011 0.018489 1.2023E-05 1.0028 0.00065214 650.293196757814 654.299868853942 37.386 0.52594 37.386 37.17 37.696 0 154 43 6 0 0 0 0.0085054 1 18967 41.399 38.421 1 1.2756 1.2499 0 21463000 10079000 11384000 4748 1009 1782 1832 7423 7423 795 DGWPAMGIHGDK 12 1 0 Oxidation (M) _DGWPAM(ox)GIHGDK_ DGWPAM(1)GIHGDK DGWPAM(44.43)GIHGDK 0 1 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8019 2 650.292962 1298.57137 75172.41 1.0579 0.00068795 0.43429 0.00028242 1.4922 0.00097036 650.29355817062 654.299606535028 36.413 0.67067 36.413 35.989 36.659 0 175 56 5 0 0 0 0.0064236 1 18668 44.425 40.503 1 1.2081 1.2387 0 31957000 16023000 15933000 4749 1009 1782 1832 7424 7424 795 DGYDYDGYR 9 0 1 Unmodified _DGYDYDGYR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.2238 2 562.219985 1122.42542 80532.7 0.657 0.00036938 -0.45513 -0.00025588 0.20187 0.00011349 562.219569205047 567.223850873674 40.384 0.99012 40.384 40.061 41.051 0 474 86 8 0 0 0 0.0012636 2 21004 87.696 73.559 1 1.3051 1.5217 0 192690000 80102000 112580000 4750 1333 1783 1833 7425;7426 7425 DGYDYDGYR 9 0 1 Unmodified _DGYDYDGYR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.2238 2 562.219985 1122.42542 80756.45 0.80303 0.00045148 -0.56067 -0.00031522 0.24236 0.00013626 562.219471666249 567.223795253204 39.374 1.1788 39.374 39.083 40.261 0 549 101 8 0 0 0 0.00064829 2 20718 96.311 85.283 1 1.2942 1.4716 0 120530000 51840000 68690000 4751 1333 1783 1833 7427;7428 7427 DGYDYDGYR 9 0 1 Unmodified _DGYDYDGYR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.2194 2 562.219985 1122.42542 81203.32 0.36613 0.00020584 -0.53298 -0.00029965 -0.16685 -9.3806E-05 562.219538112614 567.223864627601 47.001 1.3641 47.001 46.398 47.762 3.8147E-06 457 96 6 0 0 0 0.0038088 1 22654 70.856 60.591 1 0.76221 0.65479 0 7996300 4247000 3749300 4752 1333 1783 1833 7429 7429 DGYDYDGYR 9 0 1 Unmodified _DGYDYDGYR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.224 2 562.219985 1122.42542 81791.4 0.22952 0.00012904 -0.29642 -0.00016665 -0.066901 -3.7613E-05 562.219664552133 567.224022436444 47.434 1.1704 47.434 46.832 48.002 0 425 90 7 0 0 0 0.052105 1 22254 37.191 27.204 1 0.8159 0.68025 0 6428100 3847800 2580300 4753 1333 1783 1833 7430 7430 DGYIHYGQTVK 11 1 0 Unmodified _DGYIHYGQTVK_ 0 0 0 B7Z8D8;D6R927;Q14663;A0A024R9Q8;Q06330 B7Z8D8 B7Z8D8 RBPJ;KBF2;RBPSUH Recombining binding protein suppressor of hairless ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.8182 2 640.817127 1279.6197 NaN NaN NaN 0.20926 0.00013409 NaN NaN NaN NaN 37.336 0.22539 37.336 37.271 37.496 0 0 0 0 0.0029374 2 19361 69.786 57.735 1 NaN NaN 0 7531400 7531400 0 4754 287 1784 1834 7431;7432 7431 DHAISLSEPR 10 0 1 Unmodified _DHAISLSEPR_ 0 0 0 E7EPN9;Q9Y520;B4DM27;B4DQN8 E7EPN9 E7EPN9 PRRC2C Protein PRRC2C MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.7901 2 562.78837 1123.56219 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.885 1 36.885 36.385 37.385 0 0 0 0 0.0068307 1 18706 61.691 41.171 1 4755 1219 1785 1835 7433 7433 DHAISLSEPR 10 0 1 Unmodified _DHAISLSEPR_ 0 0 0 E7EPN9;Q9Y520;B4DM27;B4DQN8 E7EPN9 E7EPN9 PRRC2C Protein PRRC2C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.7886 2 562.78837 1123.56219 NaN NaN NaN 0.39445 0.00022199 NaN NaN NaN NaN 35.842 0.32402 35.842 35.689 36.013 -3.8147E-06 0 0 0 0.048381 1 18417 47.198 37.61 1 NaN NaN 0 2807300 2807300 0 4756 1219 1785 1835 7434 7434 DHASIQMNVAEVDK 14 1 0 Oxidation (M) _DHASIQM(ox)NVAEVDK_ DHASIQM(1)NVAEVDK DHASIQM(143.56)NVAEVDK 0 1 0 Q8WVC2;Q6FGH5;P63220;Q9BYK1 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.8694 2 786.869762 1571.72497 68346.51 0.71511 0.00056269 0.069891 5.4995E-05 0.785 0.00061769 786.869869595395 790.877026123437 36.48 0.46587 36.48 36.285 36.751 0 275 43 9 0 0 0 1.955E-21 1 18408 143.56 121.23 1 1.6911 1.9089 0 135850000 48416000 87431000 4757 1655 1786 1836 7435 7435 1432 DHASIQMNVAEVDK 14 1 0 Oxidation (M) _DHASIQM(ox)NVAEVDK_ DHASIQM(1)NVAEVDK DHASIQM(121.18)NVAEVDK 0 1 0 Q8WVC2;Q6FGH5;P63220;Q9BYK1 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.5873 3 524.9156 1571.72497 81154.92 0.48604 0.00025513 0.048803 2.5618E-05 0.53484 0.00028075 524.915614019656 527.587002729603 36.484 0.49133 36.484 36.294 36.785 0 231 45 8 0 0 0 2.8714E-10 1 18410 121.18 108.05 1 1.6442 1.8058 0 53804000 16457000 37347000 4758 1655 1786 1836 7436 7436 1432 DHASIQMNVAEVDK 14 1 0 Oxidation (M) _DHASIQM(ox)NVAEVDK_ DHASIQM(1)NVAEVDK DHASIQM(51.25)NVAEVDK 0 1 0 Q8WVC2;Q6FGH5;P63220;Q9BYK1 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.8781 2 786.869762 1571.72497 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.278 1 36.278 35.778 36.778 0 0 0 0 0.004778 1 18331 51.252 40.728 1 4759 1655 1786 1836 7437 7437 1432 DHASIQMNVAEVDK 14 1 0 Oxidation (M) _DHASIQM(ox)NVAEVDK_ DHASIQM(1)NVAEVDK DHASIQM(124.38)NVAEVDK 0 1 0 Q8WVC2;Q6FGH5;P63220;Q9BYK1 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.8798 2 786.869762 1571.72497 67840.71 1.5767 0.0012407 -0.030203 -2.3765E-05 1.5465 0.0012169 786.86979716126 790.876950146141 35.448 0.51276 35.448 35.223 35.735 0 297 47 8 0 0 0 1.2459E-10 2 17957 124.38 113.45 1 1.8501 2.0682 0 102270000 41602000 60666000 4760 1655 1786 1836 7438;7439 7438 1432 DHASIQMNVAEVDK 14 1 0 Oxidation (M) _DHASIQM(ox)NVAEVDK_ DHASIQM(1)NVAEVDK DHASIQM(124.42)NVAEVDK 0 1 0 Q8WVC2;Q6FGH5;P63220;Q9BYK1 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.588 3 524.9156 1571.72497 82864.67 1.2787 0.00067122 0.31206 0.0001638 1.5908 0.00083503 524.915750323697 527.587289283485 35.451 0.50553 35.451 35.197 35.702 0 218 47 7 0 0 0 6.2388E-11 2 18028 124.42 116.17 1 1.7489 1.9449 0 50757000 22751000 28006000 4761 1655 1786 1836 7440;7441 7440 1432 DHASIQMNVAEVDK 14 1 0 Unmodified _DHASIQMNVAEVDK_ 0 0 0 Q8WVC2;Q6FGH5;P63220;Q9BYK1 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.3813 2 778.872305 1555.73006 69538.1 0.49945 0.00038901 0.20379 0.00015873 0.70324 0.00054774 778.872515994299 782.879563936527 67.775 0.36783 67.775 67.587 67.955 -7.6294E-06 87 26 5 0 0 0 0.038216 1 34520 28.806 28.806 1 2.3842 1.9215 0 1936100 660880 1275200 4762 1655 1786 1837 7442 7442 DHAVFTR 7 0 1 Unmodified _DHAVFTR_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.2169 2 423.216852 844.419151 92457.48 -0.15846 -6.7061E-05 0.37463 0.00015855 0.21617 9.1489E-05 423.217044182867 428.221008327497 20.829 0.48414 20.829 20.682 21.166 0 92 21 7 0 0 0 0.009996 2 7254 116.11 88.948 1 1.3528 1.5184 0 92729000 45303000 47425000 4763 1535 1787 1838 7443;7444 7444 DHAVFTR 7 0 1 Unmodified _DHAVFTR_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 428.221 2 423.216852 844.419151 93649.15 -0.59315 -0.00025103 0.42107 0.0001782 -0.17209 -7.283E-05 423.216997163033 428.221065511747 22.081 0.59681 22.081 21.738 22.334 0 66 22 7 0 0 0 0.045193 1 6964 57.281 41.127 1 0.59333 0.50764 0 5933200 3523700 2409500 4764 1535 1787 1838 7445 7445 DHAVVVGVYRPPPK 14 1 1 Unmodified _DHAVVVGVYRPPPK_ 0 0 1 Q96BS4;P22087 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.9567 3 511.956059 1532.84635 84288.28 0.54833 0.00028072 0.013208 6.762E-06 0.56153 0.00028748 511.955981438526 517.963709113604 42.99 1.3864 42.99 42.223 43.609 0 547 112 8 0 0 0 9.3431E-23 3 22826 133 133 1 0.71991 0.86711 0 106870000 61380000 45487000 4765 1506 1788 1839 7446;7447;7448 7447 DHAVVVGVYRPPPK 14 1 1 Unmodified _DHAVVVGVYRPPPK_ 0 0 1 Q96BS4;P22087 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.9564 3 511.956059 1532.84635 82874.72 0.44097 0.00022576 0.16464 8.4291E-05 0.60562 0.00031005 512.290274041086 517.96391042179 40.575 1.0068 40.575 40.21 41.217 0 400 80 10 0 0 0 1.9504E-57 1 21726 152.16 147.53 1 0.68621 0.81307 0 236150000 133360000 102790000 4766 1506 1788 1839 7449 7449 DHAVVVGVYRPPPK 14 1 1 Unmodified _DHAVVVGVYRPPPK_ 0 0 1 Q96BS4;P22087 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.9636 3 511.956059 1532.84635 82855.35 0.19168 9.8132E-05 -0.059869 -3.0651E-05 0.13181 6.7482E-05 511.956116127536 517.963477002961 47.962 1.7157 47.962 47.49 49.206 0 781 126 11 0 0 0 9.6097E-07 4 23628 106.54 106.54 1 0.87848 0.78479 0 74307000 39567000 34740000 4767 1506 1788 1839 7450;7451;7452;7453 7452 DHAVVVGVYRPPPK 14 1 1 Unmodified _DHAVVVGVYRPPPK_ 0 0 1 Q96BS4;P22087 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.9329 2 767.43045 1532.84635 70357.75 0.39613 0.000304 -0.14738 -0.0001131 0.24875 0.0001909 767.430392388149 776.942517395352 48.002 0.68753 48.002 47.718 48.406 3.8147E-06 134 47 5 0 0 0 0.00067359 1 23474 81.017 81.017 1 0.64323 0.53188 0 4005000 2846600 1158400 4768 1506 1788 1839 7454 7454 DHAVVVGVYRPPPK 14 1 1 Unmodified _DHAVVVGVYRPPPK_ 0 0 1 Q96BS4;P22087 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.2907 3 511.956059 1532.84635 83058.49 0.046928 2.4025E-05 0.067732 3.4676E-05 0.11466 5.8701E-05 511.955990056933 517.963672251369 47.909 2.1406 47.909 46.971 49.111 0 935 173 10 0 0 0 7.2539E-05 3 22554 73.037 73.037 1 0.86066 0.73406 0 59311000 30465000 28845000 4769 1506 1788 1839 7455;7456;7457 7456 DHAVVVGVYRPPPK 14 1 1 Unmodified _DHAVVVGVYRPPPK_ 0 0 1 Q96BS4;P22087 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.4426 2 767.43045 1532.84635 70716.08 0.39502 0.00030315 0.079333 6.0883E-05 0.47435 0.00036403 767.430183777519 776.442243070248 47.924 0.76151 47.924 47.528 48.29 0 195 60 6 0 0 0 0.00064012 3 22709 104.22 104.22 1 0.97667 0.82167 0 4392300 2421700 1970500 4770 1506 1788 1839 7458;7459;7460 7460 DHFYSDDDAIEADSEGDAEPCDK 23 1 0 Unmodified _DHFYSDDDAIEADSEGDAEPCDK_ 0 0 0 Q9Y3B9;A0JLN3 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 870.6721 3 867.666243 2599.9769 NaN NaN NaN 0.18664 0.00016194 NaN NaN NaN NaN 61.26 0.17654 61.26 61.15 61.326 0 0 0 0 0.0058751 2 35020 29.452 26.69 1 NaN NaN 0 6501600 0 6501600 4771 2134 1789 1840 7461;7462 7461 DHFYSDDDAIEADSEGDAEPCDK 23 1 0 Unmodified _DHFYSDDDAIEADSEGDAEPCDK_ 0 0 0 Q9Y3B9;A0JLN3 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.6715 3 867.666243 2599.9769 NaN NaN NaN -0.075693 -6.5676E-05 NaN NaN NaN NaN 60.131 0.32318 60.131 59.933 60.256 0 0 0 0 1.3275E-05 2 35061 51.39 50.337 1 NaN NaN 0 5930300 0 5930300 4772 2134 1789 1840 7463;7464 7464 DHGGALGPEEFK 12 1 0 Unmodified _DHGGALGPEEFK_ 0 0 0 A0A0S2Z3G9;O43707;Q96BG6;F5GXS2;A0A0S2Z3X3 A0A0S2Z3G9 A0A0S2Z3G9 ACTN4 Alpha-actinin-4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.8055 2 628.798934 1255.58332 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.433 1 42.433 41.933 42.933 0 0 0 0 3.1474E-23 1 22563 133.89 104.73 1 4773 548 1790 1841 7465 7465 DHIMEIFSTYGK 12 1 0 Oxidation (M) _DHIM(ox)EIFSTYGK_ DHIM(1)EIFSTYGK DHIM(121.9)EIFSTYGK 0 1 0 H3BV80;H3BMS0;H3BMM9;H3BTC0;D3DU92;Q15287;A0A024R9P1 H3BV80 H3BV80 RNPS1;hCG_2026745 RNA-binding protein with serine-rich domain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8484 2 728.842484 1455.67042 NaN NaN NaN -0.78789 -0.00057424 NaN NaN NaN NaN 75.324 0.45148 75.324 74.927 75.378 0 0 0 0 1.1829E-13 1 44111 121.9 102.63 1 NaN NaN 0 10596000 0 10596000 4774 1192 1791 1842 7466 7466 905 DHIMEIFSTYGK 12 1 0 Oxidation (M) _DHIM(ox)EIFSTYGK_ DHIM(1)EIFSTYGK DHIM(106.62)EIFSTYGK 0 1 0 H3BV80;H3BMS0;H3BMM9;H3BTC0;D3DU92;Q15287;A0A024R9P1 H3BV80 H3BV80 RNPS1;hCG_2026745 RNA-binding protein with serine-rich domain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.8499 2 728.842484 1455.67042 72823.54 0.41088 0.00029947 -0.14902 -0.00010861 0.26186 0.00019086 728.842418451245 732.849497041249 73.717 0.47169 73.717 73.427 73.898 0 118 39 4 0 0 0 6.3384E-06 2 44274 106.62 101.42 1 1.081 1.1356 0 19637000 8003700 11633000 4775 1192 1791 1842 7467;7468 7467 905 DHINDIIK 8 1 0 Unmodified _DHINDIIK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0;Q6P1N4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.2713 2 484.263999 966.513445 89215.27 0.10797 5.2285E-05 0.30921 0.00014974 0.41718 0.00020202 484.264073569361 488.271117390778 38.742 0.52419 38.742 38.459 38.984 0 121 45 4 0 0 0 0.011052 1 20311 70.816 35.46 1 1.8895 1.9972 0 20121000 7590200 12531000 4776 352 1792 1843 7469 7469 DHIVLTVLPDQDQSDEAQEK 20 1 0 Unmodified _DHIVLTVLPDQDQSDEAQEK_ 0 0 0 Q8IUF8 Q8IUF8 Q8IUF8 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.3752 3 760.704521 2279.09173 NaN NaN NaN 0.73602 0.00055989 NaN NaN NaN NaN 85.037 0.51302 85.037 84.764 85.277 0 0 0 0 0.036706 1 51098 25.083 21.28 1 NaN NaN 0 17779000 17779000 0 4777 1891 1793 1844 7470 7470 DHIVLTVLPDQDQSDEAQEK 20 1 0 Unmodified _DHIVLTVLPDQDQSDEAQEK_ 0 0 0 Q8IUF8 Q8IUF8 Q8IUF8 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.7102 3 760.704521 2279.09173 68829.2 0.8837 0.00067223 -0.22403 -0.00017042 0.65967 0.00050181 760.704527012976 763.375661947102 96.516 0.77146 96.516 96.308 97.079 0 188 44 8 0 0 0 0.0012802 3 54173 30.244 30.244 1 1.3516 1.0652 0 5603600 2538400 3065200 4778 1891 1793 1844 7471;7472;7473 7471 DHIVLTVLPDQDQSDEAQEK 20 1 0 Unmodified _DHIVLTVLPDQDQSDEAQEK_ 0 0 0 Q8IUF8 Q8IUF8 Q8IUF8 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.3755 3 760.704521 2279.09173 69672.45 0.52007 0.00039562 -0.20187 -0.00015357 0.3182 0.00024205 761.038293290021 763.375802320332 96.415 1.0653 96.415 96.145 97.21 0 175 56 7 0 0 0 0.00018642 3 53252 36.253 36.253 1 1.1888 0.93057 0 3740800 1815700 1925100 4779 1891 1793 1844 7474;7475;7476 7475 DHLSFR 6 0 1 Unmodified _DHLSFR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 392.7028 2 387.698295 773.382037 NaN NaN NaN -0.33445 -0.00012967 NaN NaN NaN NaN 26.098 0.33035 26.098 25.982 26.313 -1.9073E-06 0 0 0 0.054104 1 11610 69.432 2.4387 1 NaN NaN 0 8905500 0 8905500 4780 764 1794 1845 7477 7477 DHLYGTLDPNTR 12 0 1 Unmodified _DHLYGTLDPNTR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3463 2 701.341498 1400.66844 NaN NaN NaN -0.17129 -0.00012013 NaN NaN NaN NaN 48.505 0.38077 48.505 48.322 48.703 -3.8147E-06 0 0 0 0.0042605 2 26434 64.297 53.468 1 NaN NaN 0 5171400 0 5171400 4781 1729 1795 1846 7478;7479 7479 DHNVEFR 7 0 1 Unmodified _DHNVEFR_ 0 0 0 E7ESL0;J3KQY1;Q9NWU5 E7ESL0 E7ESL0 MRPL22 39S ribosomal protein L22, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.7212 2 458.717216 915.419879 87648.94 0.2535 0.00011628 0.21865 0.0001003 0.47214 0.00021658 458.717426499741 463.721222736333 21.419 0.31328 21.419 21.282 21.596 0 51 15 4 0 0 0 0.012163 2 7701 106.36 63.233 1 1.0944 1.1238 0 14304000 6554400 7750000 4782 1222 1796 1847 7480;7481 7480 DHPLPEVAHVK 11 1 0 Unmodified _DHPLPEVAHVK_ 0 0 0 P13073;Q86WV2;H3BPG0;H3BN72;H3BNV9 P13073 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.2304 3 414.559417 1240.65642 90858.54 0.20331 8.4284E-05 -0.50067 -0.00020756 -0.29736 -0.00012327 414.559336129673 417.230487528431 33.6 0.51749 33.6 33.328 33.845 0 198 45 6 0 0 0 0.00064744 1 16701 62.408 62.408 1 1.2358 1.3476 0 50017000 27128000 22889000 4783 1477 1797 1848 7482 7482 DHPLPEVAHVK 11 1 0 Unmodified _DHPLPEVAHVK_ 0 0 0 P13073;Q86WV2;H3BPG0;H3BN72;H3BNV9 P13073 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.5594 3 414.559417 1240.65642 91074.24 0.71526 0.00029652 0.17362 7.1976E-05 0.88888 0.00036849 414.559468099827 417.230701856765 31.667 0.4249 31.667 31.388 31.813 1.9073E-06 165 38 6 0 0 0 0.00064744 1 15696 62.408 62.408 1 1.1354 1.2485 0 42312000 22167000 20145000 4784 1477 1797 1848 7483 7483 DHQTITIQEMPEK 13 1 0 Oxidation (M) _DHQTITIQEM(ox)PEK_ DHQTITIQEM(1)PEK DHQTITIQEM(59.54)PEK 0 1 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.8813 2 793.379962 1584.74537 NaN NaN NaN 0.010491 8.3232E-06 NaN NaN NaN NaN 36.608 0.095978 36.608 36.549 36.645 0 0 0 0 0.0015397 1 18537 59.542 45.95 1 NaN NaN 0 2687100 2687100 0 4785 568 1798 1849 7484 7484 420 DHQTITIQEMPEK 13 1 0 Oxidation (M) _DHQTITIQEM(ox)PEK_ DHQTITIQEM(1)PEK DHQTITIQEM(101.71)PEK 0 1 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.3861 2 793.379962 1584.74537 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.636 1 36.636 36.136 37.136 0 0 0 0 7.9872E-07 1 18543 101.71 80.248 1 4786 568 1798 1849 7485 7485 420 DHQTITIQEMPEK 13 1 0 Oxidation (M) _DHQTITIQEM(ox)PEK_ DHQTITIQEM(1)PEK DHQTITIQEM(101.71)PEK 0 1 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.3862 2 793.379962 1584.74537 69165.81 1.2592 0.00099902 -0.16213 -0.00012863 1.0971 0.00087039 793.881899102213 797.386393438452 35.736 0.26469 35.736 35.602 35.867 0 64 20 6 0 0 0 4.2142E-06 3 18255 101.71 101.71 1 2.5499 2.5787 0 8871700 3059800 5811900 4787 568 1798 1849 7486;7487;7488 7487 420 DHQTITIQEMPEK 13 1 0 Oxidation (M) _DHQTITIQEM(ox)PEK_ DHQTITIQEM(1)PEK DHQTITIQEM(90.43)PEK 0 1 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.3879 2 793.379962 1584.74537 NaN NaN NaN -0.26395 -0.00020941 NaN NaN NaN NaN 34.872 0.20637 34.872 34.733 34.939 -3.8147E-06 0 0 0 4.6193E-05 1 17640 90.434 84.14 1 NaN NaN 0 4244800 0 4244800 4788 568 1798 1849 7489 7489 420 DHQTITIQEMPEK 13 1 0 Oxidation (M) _DHQTITIQEM(ox)PEK_ DHQTITIQEM(1)PEK DHQTITIQEM(56.36)PEK 0 1 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.3815 2 793.379962 1584.74537 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.787 1 34.787 34.287 35.287 0 0 0 0 0.0031277 1 17648 56.359 46.704 1 4789 568 1798 1849 7490 7490 420 DHQYGLPIK 9 1 0 Unmodified _DHQYGLPIK_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.7856 2 535.785099 1069.55564 83684.53 0.64943 0.00034795 0.10278 5.507E-05 0.75221 0.00040302 535.785076910128 539.792545908116 50.402 0.74448 50.402 50.184 50.928 0 248 66 6 0 0 0 0.00055371 1 28422 97.635 97.635 1 0.58715 0.66267 0 65519000 44002000 21517000 4790 2000 1799 1850 7491 7491 DHQYGLPIK 9 1 0 Unmodified _DHQYGLPIK_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.785 2 535.785099 1069.55564 81857.43 0.37437 0.00020058 0.052462 2.8108E-05 0.42683 0.00022869 535.785087119046 539.792256880165 59.389 0.96931 59.389 58.992 59.961 0 367 72 8 0 0 0 1.9871E-05 2 30238 118.33 97.709 1 1.3522 1.0497 0 12751000 5451700 7299300 4791 2000 1799 1850 7492;7493 7492 DHQYGLPIK 9 1 0 Unmodified _DHQYGLPIK_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.7853 2 535.785099 1069.55564 83431.81 0.44992 0.00024106 0.20977 0.00011239 0.65969 0.00035345 535.785104381365 539.792391786131 59.735 0.87763 59.735 59.32 60.197 0 302 67 6 0 0 0 0.00042467 2 29799 99.442 70.293 1 1.3718 1.1256 0 12387000 4893000 7494200 4792 2000 1799 1850 7494;7495 7494 DHQYQFLEDAVR 12 0 1 Unmodified _DHQYQFLEDAVR_ 0 0 0 B2R8R5;Q13263;M0R3C0;M0R2I3 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.8655 2 760.860054 1519.70556 70342.28 0.75462 0.00057416 0.31793 0.0002419 1.0726 0.00081606 760.860229703463 765.864539346674 79.692 0.71889 79.692 79.45 80.169 0 254 62 5 0 0 0 8.1776E-06 2 47422 108.9 108.9 1 1.4551 1.4861 0 31102000 12354000 18748000 4793 862 1800 1851 7496;7497 7497 DHQYQFLEDAVR 12 0 1 Unmodified _DHQYQFLEDAVR_ 0 0 0 B2R8R5;Q13263;M0R3C0;M0R2I3 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.8651 2 760.860054 1519.70556 70584.74 0.34798 0.00026476 0.18506 0.0001408 0.53304 0.00040557 761.361161964343 765.86449828013 78.241 0.70291 78.241 77.891 78.594 0 264 61 6 0 0 0 1.1856E-37 3 47347 179.19 179.19 1 1.622 1.773 0 36097000 14281000 21816000 4794 862 1800 1851 7498;7499;7500 7498 DHQYQFLEDAVR 12 0 1 Unmodified _DHQYQFLEDAVR_ 0 0 0 B2R8R5;Q13263;M0R3C0;M0R2I3 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 760.8625 2 760.860054 1519.70556 71287.6 0.63503 0.00048317 -0.017562 -1.3362E-05 0.61747 0.00046981 760.859605786245 765.864344467861 90.45 0.6495 90.45 90.233 90.883 0 229 39 8 0 0 0 0.00010295 4 50057 95.618 95.618 1 1.1137 0.92684 0 10751000 4999400 5751400 4795 862 1800 1851 7501;7502;7503;7504 7503 DHQYQFLEDAVR 12 0 1 Unmodified _DHQYQFLEDAVR_ 0 0 0 B2R8R5;Q13263;M0R3C0;M0R2I3 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.8644 2 760.860054 1519.70556 71591.62 0.53665 0.00040831 -0.21241 -0.00016161 0.32424 0.0002467 760.859315725698 765.864328005546 90.383 0.68539 90.383 90.081 90.767 0 256 43 8 0 0 0 0.00094953 3 49133 63.408 63.408 1 1.1202 0.90375 0 10964000 4980900 5982900 4796 862 1800 1851 7505;7506;7507 7505 DHTLVQTIAR 10 0 1 Unmodified _DHTLVQTIAR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.3242 2 577.319837 1152.62512 81092.66 0.66255 0.00038251 0.054991 3.1747E-05 0.71755 0.00041425 577.319891148414 582.324044873133 46.251 0.74624 46.251 45.98 46.727 0 215 65 6 0 0 0 0.00034412 2 25056 89.355 72.579 1 1.1546 1.2349 0 45167000 24104000 21063000 4797 1740 1801 1852 7508;7509 7509 DHTLVQTIAR 10 0 1 Unmodified _DHTLVQTIAR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.3236 2 577.319837 1152.62512 77632.38 0.28242 0.00016305 -0.78975 -0.00045594 -0.50733 -0.00029289 577.319660875237 582.3233888598 52.334 0.77465 52.334 52.013 52.788 0 287 62 8 0 0 0 0.028407 1 25764 43.442 34.228 1 1.7045 1.3948 0 16281000 7055200 9225500 4798 1740 1801 1852 7510 7510 DHTLVQTIAR 10 0 1 Unmodified _DHTLVQTIAR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.3235 2 577.319837 1152.62512 79501.68 0.26232 0.00015144 -0.60208 -0.00034759 -0.33976 -0.00019615 577.319615087814 582.323557230477 52.513 0.96336 52.513 52.139 53.102 0 332 77 7 0 0 0 6.0556E-08 1 25332 113.71 98.556 1 1.6613 1.3406 0 11307000 4538500 6768300 4799 1740 1801 1852 7511 7511 DHTVSGDEDYCPR 13 0 1 Unmodified _DHTVSGDEDYCPR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.8175 2 775.812444 1549.61033 NaN NaN NaN -0.08082 -6.2701E-05 NaN NaN NaN NaN 23.68 0.34252 23.68 23.507 23.849 0 0 0 0 5.4449E-14 1 9465 123.79 123.79 1 NaN NaN 0 12879000 0 12879000 4800 2103 1802 1853 7512 7512 DHTVSGDEDYCPR 13 0 1 Unmodified _DHTVSGDEDYCPR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.8802 3 517.544055 1549.61033 NaN NaN NaN -0.004352 -2.2524E-06 NaN NaN NaN NaN 23.623 0.34252 23.623 23.507 23.849 0 0 0 0 0.00020067 1 9498 80.318 75.517 1 NaN NaN 0 10039000 0 10039000 4801 2103 1802 1853 7513 7513 DHTVSGDEDYCPR 13 0 1 Unmodified _DHTVSGDEDYCPR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.8174 2 775.812444 1549.61033 NaN NaN NaN -0.21705 -0.00016839 NaN NaN NaN NaN 23.291 0.38654 23.291 23.155 23.542 0 0 0 0 3.2688E-29 1 9148 149.96 147.34 1 NaN NaN 0 15596000 0 15596000 4802 2103 1802 1853 7514 7514 DHTVSGDEDYCPR 13 0 1 Unmodified _DHTVSGDEDYCPR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.8181 2 775.812444 1549.61033 69239.96 0.56808 0.00044072 0.16906 0.00013116 0.73714 0.00057188 775.81329698145 780.81674350375 26.503 0.66973 26.503 26.29 26.96 -1.9073E-06 144 31 7 0 0 0 7.4424E-09 1 9987 143.24 143.24 1 20.762 17.619 0 9239600 417450 8822200 4803 2103 1802 1853 7515 7515 DHTVSGDEDYCPR 13 0 1 Unmodified _DHTVSGDEDYCPR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.8801 3 517.544055 1549.61033 NaN NaN NaN -0.10594 -5.4829E-05 NaN NaN NaN NaN 26.511 0.50509 26.511 26.334 26.84 1.9073E-06 0 0 0 0.00028092 1 10109 78.705 77.916 1 NaN NaN 0 5248800 0 5248800 4804 2103 1802 1853 7516 7516 DHTVSGDEDYCPR 13 0 1 Unmodified _DHTVSGDEDYCPR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.8171 2 775.812444 1549.61033 67869.41 0.35428 0.00027485 0.11282 8.7527E-05 0.4671 0.00036238 775.812834549689 780.816749286169 26.73 0.74052 26.73 26.48 27.22 1.9073E-06 139 34 7 0 0 0 0.00011851 1 9601 85.377 85.377 1 16.915 13.965 0 8195600 436890 7758700 4805 2103 1802 1853 7517 7517 DHTVSGDEDYCPR 13 0 1 Unmodified _DHTVSGDEDYCPR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.8803 3 517.544055 1549.61033 82822.86 0.020656 1.069E-05 0.07146 3.6984E-05 0.092116 4.7674E-05 517.544018533098 520.880257370437 26.746 0.4983 26.746 26.502 27 0 85 24 6 0 0 0 8.9959E-10 1 9653 122.33 119.38 1 19.997 17.422 0 3513300 257300 3256000 4806 2103 1802 1853 7518 7518 DHYPCVSSLEQLTELGR 17 0 1 Unmodified _DHYPCVSSLEQLTELGR_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1007.9842 2 1002.4782 2002.94184 59490.92 0.33103 0.00033185 1.0402 0.0010428 1.3712 0.0013746 1003.98634591281 1007.48171000593 120.71 0.56298 120.71 120.42 120.98 0 107 26 8 0 0 0 0.0070188 1 71692 33.685 31.852 1 0.46234 0.39744 0 7811600 4448900 3362700 4807 895 1803 1854 7519 7519 DHYPCVSSLEQLTELGR 17 0 1 Unmodified _DHYPCVSSLEQLTELGR_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1007.4835 2 1002.4782 2002.94184 59390.5 0.43958 0.00044067 -0.1323 -0.00013263 0.30727 0.00030804 1002.97906521528 1007.48221870807 120.43 0.49604 120.43 120.2 120.69 0 89 28 4 0 0 0 0.013837 1 70587 29.299 29.299 1 1.2623 1.0629 0 4788500 1563600 3224900 4808 895 1803 1854 7520 7520 DIAAGEELLYDYGDR 15 0 1 Unmodified _DIAAGEELLYDYGDR_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.3993 2 850.394124 1698.7737 NaN NaN NaN 0.8873 0.00075456 NaN NaN NaN NaN 106.7 0.78263 106.7 106.28 107.07 0 0 0 0 1.4847E-15 1 68005 118.37 101.34 1 NaN NaN 0 12365000 0 12365000 4809 505 1804 1855 7521 7521 DIAAGEELLYDYGDR 15 0 1 Unmodified _DIAAGEELLYDYGDR_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 855.4001 2 850.394124 1698.7737 65504.39 0.87101 0.0007407 0.32156 0.00027345 1.1926 0.0010142 850.896362972302 855.398389655227 118.37 0.84747 118.37 118.07 118.92 0 153 38 7 0 0 0 2.6025E-07 2 69812 107.37 107.37 1 2.9087 2.4924 0 8606600 2391400 6215200 4810 505 1804 1855 7522;7523 7522 DIAAGEELLYDYGDR 15 0 1 Unmodified _DIAAGEELLYDYGDR_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 856.4029 2 850.394124 1698.7737 66190.47 0.7701 0.00065489 0.56624 0.00048153 1.3363 0.0011364 850.394115240941 855.398323042957 118.3 0.93549 118.3 118 118.94 7.6294E-06 212 44 8 0 0 0 0.00022178 1 68829 66.498 66.498 1 2.656 2.2106 0 7196800 1972400 5224400 4811 505 1804 1855 7524 7524 DIALSLPQLPR 11 0 1 Unmodified _DIALSLPQLPR_ 0 0 0 B3KMB8;A0A024R419;Q9NYY8 B3KMB8 B3KMB8 KIAA0971;FASTKD2 FAST kinase domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8657 2 611.861338 1221.70812 79763.75 0.53663 0.00032834 0.054602 3.3409E-05 0.59123 0.00036175 611.861214883341 617.367080078794 116.38 0.43875 116.38 116.16 116.6 0 85 27 5 0 0 0 0.00031294 1 76134 87.913 71.66 1 1.7448 1.7595 0 6228000 2684200 3543800 4812 147 1805 1856 7525 7525 DICACAATGTGK 12 1 0 Unmodified _DICACAATGTGK_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.7708 2 612.771005 1223.52746 NaN NaN NaN -0.52411 -0.00032116 NaN NaN NaN NaN 26.612 0.33467 26.612 26.452 26.787 0 0 0 0 0.0019515 1 11952 72.2 52.414 1 NaN NaN 0 7738400 7738400 0 4813 899;1099 1806 1857 7526 7526 DICACAATGTGK 12 1 0 Unmodified _DICACAATGTGK_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.7725 2 612.771005 1223.52746 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.186 1 26.186 25.686 26.686 0 0 0 0 0.00048613 1 11661 79.693 59.364 1 4814 899;1099 1806 1857 7527 7527 DICACAATGTGK 12 1 0 Unmodified _DICACAATGTGK_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.7784 2 612.771005 1223.52746 77303.85 0.091013 5.577E-05 0.14459 8.8603E-05 0.23561 0.00014437 612.771079512882 616.778463117973 30.03 0.45627 30.03 29.781 30.237 0 139 28 7 0 0 0 0.004055 2 11844 54.471 47.88 1 1.1021 0.88082 0 4134700 1919400 2215400 4815 899;1099 1806 1857 7528;7529 7529 DICNDVLSLLEK 12 1 0 Unmodified _DICNDVLSLLEK_ 0 0 0 D0PNI1;P63104;B0AZS6;E7EX29;E7ESK7 D0PNI1 D0PNI1 YWHAZ 14-3-3 protein zeta/delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.8704 2 709.863417 1417.71228 72605.88 1.1513 0.00081726 -0.27218 -0.00019321 0.87911 0.00062405 709.863113610132 714.372341184843 130.13 0.37381 130.13 130.03 130.4 0 62 23 6 0 0 0 1.3299E-12 1 84820 129.16 98.902 1 1.7969 1.7786 0 9453000 3426300 6026700 4816 1182 1807 1858 7530 7530 DICNDVLSLLEK 12 1 0 Unmodified _DICNDVLSLLEK_ 0 0 0 D0PNI1;P63104;B0AZS6;E7EX29;E7ESK7 D0PNI1 D0PNI1 YWHAZ 14-3-3 protein zeta/delta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.8637 2 709.863417 1417.71228 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.73 1 129.73 129.23 130.23 0 0 0 0 0.0034689 1 86676 66.595 38.853 1 4817 1182 1807 1858 7531 7531 DIDAFWLQR 9 0 1 Unmodified _DIDAFWLQR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.2964 2 582.29583 1162.57711 81240.16 0.70589 0.00041104 -0.021344 -1.2429E-05 0.68455 0.00039861 582.29590506876 587.299819856319 111.17 0.72706 111.17 110.81 111.53 0 172 49 5 0 0 0 1.6857E-05 3 69735 120.92 120.92 1 0.86297 0.90465 0 12314000 6867200 5446400 4818 1411 1808 1859 7532;7533;7534 7532 DIDAFWLQR 9 0 1 Unmodified _DIDAFWLQR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.3005 2 582.29583 1162.57711 81064.35 0.73199 0.00042624 -0.080779 -4.7037E-05 0.65122 0.0003792 582.295741482931 587.29991707937 110.53 0.73251 110.53 110.27 111 0 210 55 6 0 0 0 0.00054206 2 71057 97.798 97.798 1 0.77234 0.76057 0 14548000 7909800 6637700 4819 1411 1808 1859 7535;7536 7536 DIDAFWLQR 9 0 1 Unmodified _DIDAFWLQR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.295 2 582.29583 1162.57711 83535.98 0.75869 0.00044178 -0.29231 -0.00017021 0.46638 0.00027157 582.295627994055 587.29969295734 121.8 0.67743 121.8 121.51 122.18 7.6294E-06 85 34 4 0 0 0 0.03016 1 72517 45.972 45.972 1 1.1705 1.0359 0 1502700 725730 776920 4820 1411 1808 1859 7537 7537 DIDAFWLQR 9 0 1 Unmodified _DIDAFWLQR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.2964 2 582.29583 1162.57711 81110.27 0.73811 0.0004298 0.10157 5.9145E-05 0.83968 0.00048894 582.797401747261 587.299885773496 121.69 0.70639 121.69 121.45 122.16 0 69 34 4 0 0 0 0.034216 1 71529 44.349 40.941 1 1.0183 0.88921 0 1431400 742460 688960 4821 1411 1808 1859 7538 7538 DIDEVSSLLR 10 0 1 Unmodified _DIDEVSSLLR_ 0 0 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.8073 2 573.803685 1145.59282 NaN NaN NaN 0.26575 0.00015249 NaN NaN NaN NaN 102.08 0.82002 102.08 101.77 102.59 0 0 0 0 0.0033711 1 62683 76.827 40.947 1 NaN NaN 0 16188000 0 16188000 4822 1592 1809 1860 7539 7539 DIDEVSSLLR 10 0 1 Unmodified _DIDEVSSLLR_ 0 0 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.8043 2 573.803685 1145.59282 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.01 1 102.01 101.51 102.51 0 0 0 0 0.033074 1 62756 49.418 15.622 1 4823 1592 1809 1860 7540 7540 DIDEVSSLLR 10 0 1 Unmodified _DIDEVSSLLR_ 0 0 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.8046 2 573.803685 1145.59282 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.18 1 102.18 101.68 102.68 0 0 0 0 0.018623 1 62883 54.416 19.609 1 4824 1592 1809 1860 7541 7541 DIDEVSSLLR 10 0 1 Unmodified _DIDEVSSLLR_ 0 0 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.8076 2 573.803685 1145.59282 80601.25 0.64005 0.00036727 0.087953 5.0468E-05 0.72801 0.00041773 573.803595101671 578.807746461295 101.55 0.86157 101.55 101.23 102.09 0 206 67 5 0 0 0 0.00041053 2 63828 87.308 53.511 1 3.113 3.1088 0 16800000 3982800 12818000 4825 1592 1809 1860 7542;7543 7542 DIDIHEVR 8 0 1 Unmodified _DIDIHEVR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5;Q5RI18 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.7634 2 498.759081 995.503609 84641.66 0.44315 0.00022103 0.2956 0.00014743 0.73875 0.00036846 498.759189521305 503.763290524229 38.947 1.4338 38.947 38.591 40.024 0 447 117 8 0 0 0 0.0096168 3 19951 74.127 63.254 1 1.5785 1.8706 0 489500000 208180000 281320000 4826 999 1810 1861 7544;7545;7546 7544 DIDIHEVR 8 0 1 Unmodified _DIDIHEVR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5;Q5RI18 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 332.8419 3 332.841813 995.503609 NaN NaN NaN 0.28584 9.5139E-05 NaN NaN NaN NaN 38.917 0.38867 38.917 38.78 39.169 0 0 0 0 0.029862 1 20105 34.253 6.4811 1 NaN NaN 0 3461100 3461100 0 4827 999 1810 1861 7547 7547 DIDIHEVR 8 0 1 Unmodified _DIDIHEVR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5;Q5RI18 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 332.8418 3 332.841813 995.503609 107051.1 -0.042183 -1.404E-05 0.099645 3.3166E-05 0.057463 1.9126E-05 332.84174941005 336.177974488537 37.943 0.32236 37.943 37.735 38.057 0 77 23 5 0 0 0 0.014842 1 19825 41.631 33.982 1 1.2011 1.187 0 12612000 5109600 7502500 4828 999 1810 1861 7548 7548 DIDIHEVR 8 0 1 Unmodified _DIDIHEVR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5;Q5RI18 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.7632 2 498.759081 995.503609 NaN NaN NaN -0.06697 -3.3402E-05 NaN NaN NaN NaN 37.926 0.4303 37.926 37.627 38.057 0 0 0 0 0.0029488 1 19698 105.57 81.413 1 NaN NaN 0 510330000 0 510330000 4829 999 1810 1861 7549 7549 DIDIHEVR 8 0 1 Unmodified _DIDIHEVR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5;Q5RI18 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.76 2 498.759081 995.503609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.775 1 37.775 37.275 38.275 0 0 0 0 0.003392 1 19687 96.253 43.086 1 4830 999 1810 1861 7550 7550 DIDIHEVR 8 0 1 Unmodified _DIDIHEVR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5;Q5RI18 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.7593 2 498.759081 995.503609 84606.2 0.28626 0.00014277 0.08264 4.1217E-05 0.3689 0.00018399 498.759123116208 503.76310164496 44.065 1.0215 44.065 43.738 44.76 3.8147E-06 272 71 9 0 0 0 0.0048138 2 20784 92.439 76.237 1 0.75725 0.65099 0 44759000 25534000 19225000 4831 999 1810 1861 7551;7552 7551 DIDIHEVR 8 0 1 Unmodified _DIDIHEVR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5;Q5RI18 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.7593 2 498.759081 995.503609 84481.67 0.20532 0.0001024 0.1161 5.7906E-05 0.32142 0.00016031 498.759133390235 503.763082081848 44.149 1.0032 44.149 43.778 44.781 0 291 67 10 0 0 0 0.0035323 2 20262 96.492 80.83 1 0.73973 0.64525 0 34465000 19530000 14935000 4832 999 1810 1861 7553;7554 7553 DIDILIVR 8 0 1 Unmodified _DIDILIVR_ 0 0 0 H7C1W2;E9PF84;O15384;G5E9Q7;D3DWV9;E7EQB8;P51553 H7C1W2 H7C1W2 IDH3G;hCG_2004980 Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.7962 2 478.792392 955.570232 88147.96 0.29344 0.0001405 0.11486 5.4996E-05 0.40831 0.0001955 478.792377144309 483.796431219748 109.21 0.89863 109.21 108.88 109.78 0 218 62 5 0 0 0 0.030669 1 70319 51.787 21.44 1 1.1076 1.2095 0 30070000 13791000 16279000 4833 1199 1811 1862 7555 7555 DIDILNSAGK 10 1 0 Unmodified _DIDILNSAGK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2801 2 523.279846 1044.54514 84105.94 0.39066 0.00020442 0.46821 0.00024501 0.85887 0.00044943 523.280187461823 527.287055777164 74.595 1.4445 74.595 73.886 75.331 0 444 126 6 0 0 0 0.0067028 2 44644 58.433 17.004 1 2.0465 2.2888 0 85967000 24502000 61465000 4834 1391 1812 1863 7556;7557 7557 DIDISSPEFK 10 1 0 Unmodified _DIDISSPEFK_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.2933 2 575.784961 1149.55537 80679.11 0.29054 0.00016729 -0.25588 -0.00014733 0.034655 1.9954E-05 576.28669600108 579.792162143204 81.323 0.73666 81.323 80.917 81.654 0 230 63 5 0 0 0 0.0032667 2 48308 65.305 65.305 1 1.5578 1.5325 0 23811000 9868000 13943000 4835 1696 1813 1864 7558;7559 7558 DIDISSPEFK 10 1 0 Unmodified _DIDISSPEFK_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.7847 2 575.784961 1149.55537 80698.29 0.56696 0.00032645 -0.21193 -0.00012203 0.35503 0.00020442 576.286982817951 579.791935118422 80.519 0.70318 80.519 80.162 80.866 0 223 57 6 0 0 0 0.00051176 1 49007 85.676 79.058 1 1.59 1.6112 0 29369000 15473000 13896000 4836 1696 1813 1864 7560 7560 DIDISSPEFK 10 1 0 Unmodified _DIDISSPEFK_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.2872 2 575.784961 1149.55537 82327.89 0.49318 0.00028397 -1.0065 -0.00057955 -0.51337 -0.00029559 575.784852830822 579.791847055408 92.498 0.70733 92.498 92.106 92.814 0 136 36 6 0 0 0 0.034493 1 51488 40.994 37.586 1 1.0834 0.90805 0 2192300 1179500 1012700 4837 1696 1813 1864 7561 7561 DIDISSPEFK 10 1 0 Unmodified _DIDISSPEFK_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.7914 2 575.784961 1149.55537 82877.04 0.23103 0.00013302 -0.84228 -0.00048497 -0.61125 -0.00035195 576.285763551652 579.791857737956 92.546 0.65959 92.546 92.15 92.809 -7.6294E-06 127 35 6 0 0 0 0.048481 1 50648 36.424 32.264 1 1.1006 0.8543 0 2160700 1153600 1007100 4838 1696 1813 1864 7562 7562 DIDNNLITSTPR 12 0 1 Unmodified _DIDNNLITSTPR_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.8494 2 679.849155 1357.68376 74849.21 0.69425 0.00047198 0.18264 0.00012417 0.87689 0.00059615 679.849220367746 684.853752742403 73.783 0.62064 73.783 73.482 74.103 0 190 58 5 0 0 0 1.4823E-22 3 43183 153.12 132.82 1 0.87567 0.87821 0 16162000 9049100 7113000 4839 187 1814 1865 7563;7564;7565 7564 DIDNNLITSTPR 12 0 1 Unmodified _DIDNNLITSTPR_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.8502 2 679.849155 1357.68376 74624.82 0.66222 0.00045021 0.39028 0.00026533 1.0525 0.00071554 679.849997871286 684.853745102818 72.802 0.57205 72.802 72.529 73.101 0 159 49 5 0 0 0 1.5281E-08 3 43626 121.9 94.156 1 1.0386 1.0471 0 19571000 8750900 10820000 4840 187 1814 1865 7566;7567;7568 7567 DIDNNLITSTPR 12 0 1 Unmodified _DIDNNLITSTPR_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.853 2 679.849155 1357.68376 74538.88 0.518 0.00035216 0.06039 4.1056E-05 0.57839 0.00039322 679.849057352878 684.853245971585 83.791 0.73546 83.791 83.422 84.157 0 230 58 5 0 0 0 0.00021114 4 45573 87.568 73.361 1 1.3071 1.1228 0 6402600 3052600 3350000 4841 187 1814 1865 7569;7570;7571;7572 7569 DIDNNLITSTPR 12 0 1 Unmodified _DIDNNLITSTPR_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.849 2 679.849155 1357.68376 73629.55 0.76467 0.00051986 -0.072224 -4.9101E-05 0.69245 0.00047076 679.849034497885 684.853122854676 84.065 0.71532 84.065 83.751 84.466 0 224 57 6 0 0 0 0.00060342 3 45003 68.536 51.305 1 1.3759 1.1415 0 5482200 2489700 2992400 4842 187 1814 1865 7573;7574;7575 7575 DIEDVFYK 8 1 0 Unmodified _DIEDVFYK_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.7505 2 514.75039 1027.48623 82994.36 0.66543 0.00034253 0.11479 5.9089E-05 0.78022 0.00040162 514.750174787005 518.757356415107 86.578 0.76331 86.578 86.335 87.098 0 336 54 10 0 0 0 0.0082133 3 52373 79.597 67.404 1 1.3089 1.5367 0 305380000 122820000 182560000 4843 1333 1815 1866 7576;7577;7578 7578 DIEDVFYK 8 1 0 Unmodified _DIEDVFYK_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1028.4988 1 1028.4935 1027.48623 59905.41 0.66429 0.00068322 0.053356 5.4876E-05 0.71764 0.00073809 1028.49384718063 1036.50732972167 86.579 0.6682 86.579 86.369 87.037 0 214 47 7 0 0 0 0.014516 1 52411 85.064 74.65 1 1.1885 1.3463 0 98850000 42650000 56200000 4844 1333 1815 1866 7579 7579 DIEDVFYK 8 1 0 Unmodified _DIEDVFYK_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.7574 2 514.75039 1027.48623 84087.93 0.65699 0.00033819 -0.0044622 -2.2969E-06 0.65253 0.00033589 514.750093016404 518.757371061787 85.64 0.95146 85.64 85.263 86.215 0 368 74 10 0 0 0 0.011877 2 52638 68.915 50.256 1 1.3539 1.5888 0 337870000 142780000 195090000 4845 1333 1815 1866 7580;7581 7580 DIEDVFYK 8 1 0 Unmodified _DIEDVFYK_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.7503 2 514.75039 1027.48623 83393.31 0.47171 0.00024281 0.58205 0.00029961 1.0538 0.00054243 514.750232094629 518.75743778578 98.37 1.0079 98.37 97.815 98.823 -7.6294E-06 234 65 7 0 0 0 0.048223 2 55360 44.395 40.258 1 0.79037 0.62205 0 11051000 5755500 5295400 4846 1333 1815 1866 7582;7583 7582 DIEDVFYK 8 1 0 Unmodified _DIEDVFYK_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.757 2 514.75039 1027.48623 84219.76 0.44795 0.00023058 0.49716 0.00025592 0.94511 0.0004865 514.750312154247 518.757496475669 98.429 0.82456 98.429 98.011 98.836 0 252 50 8 0 0 0 0.033206 2 54570 50.127 45.99 1 0.79903 0.65924 0 11146000 6049300 5096300 4847 1333 1815 1866 7584;7585 7585 DIEEIIDELK 10 1 0 Unmodified _DIEEIIDELK_ 0 0 0 Q9UEH5;Q6IPW4;Q6IB76;A8K750;E7EPT4;P19404 Q9UEH5 Q9UEH5 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8265 2 608.819001 1215.62345 NaN NaN NaN 0.28499 0.00017351 NaN NaN NaN NaN 123.75 0.3761 123.75 123.59 123.97 7.6294E-06 0 0 0 0.0067484 1 80242 66.692 24.093 1 NaN NaN 0 1264400 0 1264400 4848 766 1816 1867 7586 7586 DIEEIIDELK 10 1 0 Unmodified _DIEEIIDELK_ 0 0 0 Q9UEH5;Q6IPW4;Q6IB76;A8K750;E7EPT4;P19404 Q9UEH5 Q9UEH5 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.8199 2 608.819001 1215.62345 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.75 1 123.75 123.25 124.25 0 0 0 0 0.042499 1 80280 46.158 18.416 1 4849 766 1816 1867 7587 7587 DIEEIIDELK 10 1 0 Unmodified _DIEEIIDELK_ 0 0 0 Q9UEH5;Q6IPW4;Q6IB76;A8K750;E7EPT4;P19404 Q9UEH5 Q9UEH5 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8266 2 608.819001 1215.62345 NaN NaN NaN 0.2996 0.0001824 NaN NaN NaN NaN 123.41 0.32121 123.41 123.26 123.58 0 0 0 0 0.0040971 1 81952 73.985 20.017 1 NaN NaN 0 1473900 0 1473900 4850 766 1816 1867 7588 7588 DIELSDDPYDCIR 13 0 1 Unmodified _DIELSDDPYDCIR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.3549 2 805.853777 1609.693 70590.49 0.77892 0.0006277 -0.21082 -0.00016989 0.5681 0.00045781 806.355080162681 810.857395253667 92.966 0.36229 92.966 92.799 93.161 0 92 31 4 0 0 0 0.00013105 1 57733 79.693 79.693 1 0.77775 0.77119 0 12036000 5594800 6440700 4851 120 1817 1868 7589 7589 DIELSDDPYDCIR 13 0 1 Unmodified _DIELSDDPYDCIR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 805.8547 2 805.853777 1609.693 67990.25 0.6667 0.00053726 0.16715 0.0001347 0.83385 0.00067196 805.854236119381 810.857909724436 106.48 0.49969 106.48 106.15 106.65 7.6294E-06 131 26 7 0 0 0 0.00013248 2 60824 73.781 73.781 1 1.035 0.88281 0 5608900 1800300 3808600 4852 120 1817 1868 7590;7591 7591 DIELSDDPYDCIR 13 0 1 Unmodified _DIELSDDPYDCIR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 810.8607 2 805.853777 1609.693 70783.44 0.61893 0.00049876 0.10055 8.1032E-05 0.71948 0.0005798 805.85387121716 810.858019459937 106.42 0.50099 106.42 106.16 106.66 0 138 32 6 0 0 0 0.0001783 1 59900 71.555 70.648 1 1.0027 0.86694 0 3428100 1379900 2048200 4853 120 1817 1868 7592 7592 DIENQYETQITQIEHEVSSSGQEVQSSAK 29 1 0 Unmodified _DIENQYETQITQIEHEVSSSGQEVQSSAK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1089.5126 3 1088.84281 3263.50659 NaN NaN NaN 0.083655 9.1087E-05 NaN NaN NaN NaN 113.09 0.84464 113.09 112.76 113.61 7.6294E-06 0 0 0 1.3957E-17 1 71318 77.522 71.921 1 NaN NaN 0 503350000 503350000 0 + 4854 1165 1818 1869 7593 7593 DIENQYETQITQIEHEVSSSGQEVQSSAK 29 1 0 Unmodified _DIENQYETQITQIEHEVSSSGQEVQSSAK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1089.1741 3 1088.84281 3263.50659 NaN NaN NaN -0.11199 -0.00012194 NaN NaN NaN NaN 112.57 0.77385 112.57 112.29 113.06 0 0 0 0 2.8533E-58 2 72695 136.14 124.83 1 NaN NaN 0 812040000 812040000 0 + 4855 1165 1818 1869 7594;7595 7595 DIENQYETQITQIEHEVSSSGQEVQSSAK 29 1 0 Unmodified _DIENQYETQITQIEHEVSSSGQEVQSSAK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1089.512 3 1088.84281 3263.50659 NaN NaN NaN -0.96329 -0.0010489 NaN NaN NaN NaN 113 0.35004 113 112.93 113.28 7.6294E-06 0 0 0 0.045346 1 73345 22.096 16.888 1 NaN NaN 0 8493500 8493500 0 + 4856 1165 1818 1869 7596 7596 DIEQFTEFFENPAFRPDGLK 20 1 1 Unmodified _DIEQFTEFFENPAFRPDGLK_ 0 0 1 Q9H9T3;B4DXV1;B4DPB7;B4DKA4 Q9H9T3 Q9H9T3 ELP3 Elongator complex protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.0646 3 800.721735 2399.14338 NaN NaN NaN 1.1616 0.00093011 NaN NaN NaN NaN 129.09 0.14087 129.09 129.07 129.21 0 0 0 0 5.5663E-14 1 86226 102.37 84.996 1 NaN NaN 0 4512900 0 4512900 4857 2047 1819 1870 7597 7597 DIFMFITR 8 0 1 Oxidation (M) _DIFM(ox)FITR_ DIFM(1)FITR DIFM(42.11)FITR 0 1 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.771 2 529.770603 1057.52665 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.15 1 116.15 115.65 116.65 0 0 0 0 0.046504 1 75937 42.109 17.954 1 4858 2069 1820 1871 7598 7598 1897 DIFPYSENK 9 1 0 Unmodified _DIFPYSENK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.7663 2 556.766571 1111.51859 80761.48 0.33594 0.00018704 0.34257 0.00019073 0.67851 0.00037777 556.76659348245 560.773913684029 69.73 1.0531 69.73 69.133 70.186 0 450 92 6 0 0 0 0.001665 2 40503 82.452 72.865 1 0.7262 0.81622 0 70056000 41972000 28084000 4859 1405 1821 1872 7599;7600 7599 DIFPYSENK 9 1 0 Unmodified _DIFPYSENK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.7671 2 556.766571 1111.51859 81304.55 0.50242 0.00027973 0.64153 0.00035718 1.144 0.00063691 556.766740282755 560.774036978075 68.62 0.93753 68.62 68.131 69.069 0 414 77 8 0 0 0 0.0018198 2 40761 80.438 80.438 1 0.7582 0.84857 0 83933000 50303000 33631000 4860 1405 1821 1872 7601;7602 7602 DIFPYSENK 9 1 0 Unmodified _DIFPYSENK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.767 2 556.766571 1111.51859 81320.7 0.47269 0.00026318 0.068278 3.8015E-05 0.54097 0.00030119 556.766509693271 560.773624388635 78.931 1.3699 78.931 78.423 79.793 0 397 84 8 0 0 0 0.0018606 2 42504 79.906 69.676 1 1.2265 0.98605 0 21711000 9426800 12285000 4861 1405 1821 1872 7603;7604 7604 DIFPYSENK 9 1 0 Unmodified _DIFPYSENK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.7668 2 556.766571 1111.51859 81306.4 0.51709 0.0002879 0.15988 8.9015E-05 0.67697 0.00037691 556.766537927016 560.77369113524 79.283 1.127 79.283 78.788 79.915 0 380 69 8 0 0 0 0.0095109 2 41978 60.118 56.372 1 1.2343 0.99196 0 16706000 7624300 9081500 4862 1405 1821 1872 7605;7606 7606 DIFSEVGPVVSFR 13 0 1 Unmodified _DIFSEVGPVVSFR_ 0 0 0 A0A0A0MT56;E9PID8;B4DUD5;E7EWR4;B3V096;P33240 A0A0A0MT56 A0A0A0MT56 CSTF2 Cleavage stimulation factor subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.3823 2 726.380091 1450.74563 77515.89 1.0946 0.00079513 -0.10548 -7.662E-05 0.98917 0.00071851 726.380107414595 731.383826969386 123.11 0.44336 123.11 122.91 123.35 0 100 35 5 0 0 0 0.00021605 1 79756 69.721 29.872 1 2.2752 2.3345 0 6495800 2633700 3862100 4863 485 1822 1873 7607 7607 DIFSEVGSVVSFR 13 0 1 Unmodified _DIFSEVGSVVSFR_ 0 0 0 Q9H0L4 Q9H0L4 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.3734 2 721.369724 1440.72489 NaN NaN NaN -0.61435 -0.00044318 NaN NaN NaN NaN 129.19 0.12738 129.19 129.15 129.27 0 0 0 0 0.00044472 1 86289 84.507 55.421 1 NaN NaN 0 1839400 0 1839400 4864 2024 1823 1874 7608 7608 DIGEGNLSTAAAAALAAAAVK 21 1 0 Unmodified _DIGEGNLSTAAAAALAAAAVK_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q59G16 Q59G16 SMARCC2 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.0031 2 943.004904 1883.99526 61877.93 1.0031 0.00094589 0.69754 0.00065778 1.7006 0.0016037 943.004613541186 947.012815711901 125.31 0.4378 125.31 125.07 125.51 0 148 28 7 0 0 0 3.9838E-16 2 81356 111.12 111.12 1 0.62347 0.65313 0 15179000 9424800 5754600 4865 321 1824 1875 7609;7610 7610 DIGEGNLSTAAAAALAAAAVK 21 1 0 Unmodified _DIGEGNLSTAAAAALAAAAVK_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q59G16 Q59G16 SMARCC2 SWI/SNF complex subunit SMARCC2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.5075 2 943.004904 1883.99526 NaN NaN NaN -0.074721 -7.0463E-05 NaN NaN NaN NaN 125.01 0.37382 125.01 124.77 125.14 7.6294E-06 0 0 0 1.1241E-12 1 83163 88.075 73.917 1 NaN NaN 0 10261000 10261000 0 4866 321 1824 1875 7611 7611 DIGEGNLSTAAAAALAAAAVK 21 1 0 Unmodified _DIGEGNLSTAAAAALAAAAVK_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q59G16 Q59G16 SMARCC2 SWI/SNF complex subunit SMARCC2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.0137 2 943.004904 1883.99526 NaN NaN NaN 1.618 0.0015258 NaN NaN NaN NaN 124.98 0.37382 124.98 124.77 125.14 0 0 0 0 5.2988E-13 1 83190 90.707 81.703 1 NaN NaN 0 7656700 0 7656700 4867 321 1824 1875 7612 7612 DIGVPMTSVR 10 0 1 Oxidation (M) _DIGVPM(ox)TSVR_ DIGVPM(1)TSVR DIGVPM(41.03)TSVR 0 1 0 Q9HBL8;I3L543;I3L0Y6;I3L1Y8;I3L3I6 Q9HBL8 Q9HBL8 NMRAL1 NmrA-like family domain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.7866 2 545.781699 1089.54884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.566 1 55.566 55.066 56.066 0 0 0 0 0.036576 1 31236 41.029 15.292 1 4868 2049 1825 1876 7613 7613 1881 DIHEELPK 8 1 0 Unmodified _DIHEELPK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.7575 2 490.756007 979.497461 NaN NaN NaN -0.3105 -0.00015238 NaN NaN NaN NaN 33.578 1.0278 33.578 33.091 34.118 0 0 0 0 0.008816 1 16537 79.474 57.343 1 NaN NaN 0 29712000 29712000 0 4869 125 1826 1877 7614 7614 DIHEELPK 8 1 0 Unmodified _DIHEELPK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.7562 2 490.756007 979.497461 87460.2 0.14112 6.9257E-05 -0.055408 -2.7192E-05 0.085715 4.2065E-05 490.755832410467 494.763070345245 33.03 0.92032 33.03 32.497 33.417 -3.8147E-06 358 84 6 0 0 0 0.0047461 2 16273 92.653 70.416 1 0.86945 0.98134 0 65401000 34954000 30447000 4870 125 1826 1877 7615;7616 7615 DIHEELPK 8 1 0 Unmodified _DIHEELPK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.7631 2 490.756007 979.497461 87879.03 0.17952 8.8099E-05 -0.022547 -1.1065E-05 0.15697 7.7034E-05 490.755990615054 494.763010556965 38.379 0.84769 38.379 37.901 38.748 0 346 64 8 0 0 0 0.0064556 2 17319 87.181 55.878 1 1.1921 0.94442 0 18603000 8637800 9965400 4871 125 1826 1877 7617;7618 7617 DIHEELPK 8 1 0 Unmodified _DIHEELPK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.763 2 490.756007 979.497461 87038.11 -0.0054209 -2.6603E-06 0.015628 7.6697E-06 0.010207 5.0093E-06 490.755997291748 494.763068061703 38.447 0.84312 38.447 37.985 38.828 0 377 65 9 0 0 0 0.011482 2 16859 69.825 46.396 1 1.1751 0.94274 0 18606000 8528600 10078000 4872 125 1826 1877 7619;7620 7620 DIHELFVPENK 11 1 0 Unmodified _DIHELFVPENK_ 0 0 0 Q5TB52;B4DWB5;O95340 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.8541 2 670.845884 1339.67722 NaN NaN NaN 0.38815 0.00026039 NaN NaN NaN NaN 75.77 0.59711 75.77 75.499 76.096 0 0 0 0 0.0024609 1 44608 74.376 56.864 1 NaN NaN 0 12594000 0 12594000 4873 1044 1827 1878 7621 7621 DIIALNPLYR 10 0 1 Unmodified _DIIALNPLYR_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;A4VCH6 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.3483 2 594.342781 1186.67101 NaN NaN NaN 0.14744 8.7631E-05 NaN NaN NaN NaN 111.02 0.46075 111.02 110.8 111.26 -7.6294E-06 0 0 0 0.0016025 1 71432 85.064 56.337 1 NaN NaN 0 10116000 0 10116000 4874 946 1828 1879 7622 7622 DIIALNPLYR 10 0 1 Unmodified _DIIALNPLYR_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;A4VCH6 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.3426 2 594.342781 1186.67101 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.19 1 111.19 110.69 111.69 0 0 0 0 0.00046576 1 71706 72.485 38.688 1 4875 946 1828 1879 7623 7623 DIICQIAYAR 10 0 1 Unmodified _DIICQIAYAR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.8163 2 611.816073 1221.61759 NaN NaN NaN 0.18328 0.00011213 NaN NaN NaN NaN 88.838 0.95073 88.838 88.396 89.347 0 0 0 0 1.094E-21 1 53396 148.14 123.22 1 NaN NaN 0 39075000 39075000 0 4876 653 1829 1880 7624 7624 DIICQIAYAR 10 0 1 Unmodified _DIICQIAYAR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8203 2 611.816073 1221.61759 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.57 1 88.57 88.07 89.07 0 0 0 0 1.0047E-08 1 53395 117.89 74.082 1 4877 653 1829 1880 7625 7625 DIICQIAYAR 10 0 1 Unmodified _DIICQIAYAR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.3166 2 611.816073 1221.61759 NaN NaN NaN -1.3189 -0.00080694 NaN NaN NaN NaN 87.936 1.0246 87.936 87.479 88.504 0 0 0 0 1.488E-07 2 54322 106.36 85.056 1 NaN NaN 0 44473000 44473000 0 4878 653 1829 1880 7626;7627 7627 DIICQIAYAR 10 0 1 Unmodified _DIICQIAYAR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8208 2 611.816073 1221.61759 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.585 1 87.585 87.085 88.085 -7.6294E-06 0 0 0 6.7644E-06 1 53984 101.43 50.553 1 4879 653 1829 1880 7628 7628 DIICQIAYAR 10 0 1 Unmodified _DIICQIAYAR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.8206 2 611.816073 1221.61759 75913.27 0.28323 0.00017329 0.47318 0.0002895 0.75642 0.00046279 611.816245844595 616.820391514214 101.33 1.0356 101.33 100.75 101.79 0 357 69 7 0 0 0 0.00026133 2 57420 92.062 80.215 1 0.81893 0.68083 0 21552000 12492000 9059700 4880 653 1829 1880 7629;7630 7630 DIICQIAYAR 10 0 1 Unmodified _DIICQIAYAR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.8207 2 611.816073 1221.61759 76058.12 0.37704 0.00023068 0.48236 0.00029512 0.8594 0.0005258 611.816241260588 616.820441684611 101.28 1.2116 101.28 100.63 101.84 7.6294E-06 348 84 7 0 0 0 0.0019702 2 56495 71.223 61.312 1 0.83185 0.70843 0 19594000 10988000 8606600 4881 653 1829 1880 7631;7632 7632 DIIDTPMDFATVR 13 0 1 Oxidation (M) _DIIDTPM(ox)DFATVR_ DIIDTPM(1)DFATVR DIIDTPM(79.2)DFATVR 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.3676 2 755.366324 1508.71809 67961.05 0.5098 0.00038508 -0.59287 -0.00044783 -0.08307 -6.2748E-05 755.366624473614 760.370654029534 99.764 1.5438 99.764 99.015 100.56 -7.6294E-06 328 56 8 0 0 0 6.2537E-05 2 61104 79.201 52.087 1 0.94198 0.95958 0 27166000 15264000 11901000 4882 1942 1830 1881 7633;7634 7633 1777 DIIDTPMDFATVR 13 0 1 Oxidation (M) _DIIDTPM(ox)DFATVR_ DIIDTPM(1)DFATVR DIIDTPM(75.42)DFATVR 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.3668 2 755.366324 1508.71809 NaN NaN NaN -0.085071 -6.426E-05 NaN NaN NaN NaN 99.199 0.58945 99.199 98.936 99.525 0 0 0 0 0.00045983 1 62069 75.416 52.775 1 NaN NaN 0 23124000 23124000 0 4883 1942 1830 1881 7635 7635 1777 DIIDTPMDFATVR 13 0 1 Oxidation (M) _DIIDTPM(ox)DFATVR_ DIIDTPM(1)DFATVR DIIDTPM(62.47)DFATVR 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.3713 2 755.366324 1508.71809 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.214 1 99.214 98.714 99.714 0 0 0 0 0.001775 1 62162 62.466 35.952 1 4884 1942 1830 1881 7636 7636 1777 DIIDTPMDFATVR 13 0 1 Oxidation (M) _DIIDTPM(ox)DFATVR_ DIIDTPM(1)DFATVR DIIDTPM(65.84)DFATVR 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 760.3707 2 755.366324 1508.71809 71460.99 0.93989 0.00070996 -0.22611 -0.0001708 0.71378 0.00053916 755.36628398545 760.370527570967 111.98 0.41194 111.98 111.75 112.17 0 113 26 6 0 0 0 0.00014335 1 64938 65.842 35.278 1 1.0423 0.89603 0 6634500 2908000 3726500 4885 1942 1830 1881 7637 7637 1777 DIIDTPMDFATVR 13 0 1 Oxidation (M) _DIIDTPM(ox)DFATVR_ DIIDTPM(1)DFATVR DIIDTPM(40.15)DFATVR 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 760.3715 2 755.366324 1508.71809 NaN NaN NaN 0.18358 0.00013867 NaN NaN NaN NaN 127.12 0.3927 127.12 126.87 127.26 0 0 0 0 0.015443 1 75626 40.154 13.039 1 NaN NaN 0 1284100 0 1284100 4886 1942 1830 1881 7638 7638 1777 DIIDTPMDFATVR 13 0 1 Unmodified _DIIDTPMDFATVR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.3692 2 747.368866 1492.72318 70001.07 0.73023 0.00054575 0.3706 0.00027697 1.1008 0.00082272 747.368969136126 752.874539028825 127.24 0.50117 127.24 126.98 127.48 -7.6294E-06 76 21 6 0 0 0 0.0013174 1 76622 73.499 56.474 1 1.5996 1.3448 0 3095300 1306300 1789100 4887 1942 1830 1882 7639 7639 DIIDTPMDFATVR 13 0 1 Unmodified _DIIDTPMDFATVR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 752.3732 2 747.368866 1492.72318 71470.92 0.58489 0.00043713 0.49948 0.00037329 1.0844 0.00081043 747.368829151234 752.372725367257 127.08 0.63933 127.08 126.74 127.38 0 117 28 8 0 0 0 0.00019093 2 75739 70.942 56.251 1 1.6137 1.4035 0 4282300 1711900 2570300 4888 1942 1830 1882 7640;7641 7641 DIIGLAETGSGK 12 1 0 Unmodified _DIIGLAETGSGK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8191 2 580.81151 1159.60847 79081.13 0.79661 0.00046268 0.60772 0.00035297 1.4043 0.00081565 580.811761017967 584.81902616857 77.485 0.78136 77.485 77.2 77.981 0 288 64 6 0 0 0 4.3013E-08 2 46945 115.7 74.67 1 1.1078 1.2382 0 99004000 45923000 53081000 4889 313 1831 1883 7642;7643 7643 DIIGVAETGSGK 12 1 0 Unmodified _DIIGVAETGSGK_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56;H0YI52 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.8113 2 573.803685 1145.59282 82446.7 0.32655 0.00018738 0.47316 0.0002715 0.79971 0.00045888 573.804099772311 577.810781723399 69.313 0.49051 69.313 68.977 69.468 0 88 30 4 0 0 0 0.021812 1 36249 38.402 16.939 1 1.6261 1.3549 0 1760900 597760 1163200 4890 63 1832 1884 7644 7644 DIIHDPGR 8 0 1 Unmodified _DIIHDPGR_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.7403 2 461.740691 921.466829 86509.5 0.25815 0.0001192 -0.57729 -0.00026656 -0.31914 -0.00014736 461.740955724811 466.74391161688 26.784 1.1132 26.784 26.353 27.467 0 344 63 10 0 0 0 0.0087497 2 12224 77.282 45.993 1 0.84143 1.0012 0 1522600000 773450000 749110000 4891 1653 1833 1885 7645;7646 7646 DIIHDPGR 8 0 1 Unmodified _DIIHDPGR_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.7407 2 461.740691 921.466829 88347.65 0.05286 2.4408E-05 -0.84322 -0.00038935 -0.79036 -0.00036494 461.74077169477 466.743846580047 26.314 1.3323 26.314 25.953 27.285 -1.9073E-06 306 68 11 0 0 0 0.0018665 2 11749 105.04 73.751 1 0.91126 1.077 0 1446500000 764470000 681990000 4892 1653 1833 1885 7647;7648 7648 DIIHDPGR 8 0 1 Unmodified _DIIHDPGR_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 311.499 3 308.162886 921.466829 110358.3 0.044538 1.3725E-05 -0.10742 -3.3104E-05 -0.062887 -1.9379E-05 308.162772043928 311.498921689088 26.306 0.41872 26.306 26.105 26.524 0 70 22 4 0 0 0 0.03695 2 11765 25.559 11.98 1 0.62064 0.62739 0 9792900 4328000 5464900 4893 1653 1833 1885 7649;7650 7649 DIIHDPGR 8 0 1 Unmodified _DIIHDPGR_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.741 2 461.740691 921.466829 87224.83 0.11723 5.4131E-05 -0.0079129 -3.6537E-06 0.10932 5.0477E-05 461.740789775335 466.744752091615 29.512 2.2358 29.512 29.034 31.27 1.9073E-06 562 151 9 0 0 0 0.013465 1 12046 65.252 33.963 1 0.85756 0.74236 0 136810000 71957000 64856000 4894 1653 1833 1885 7651 7651 DIIHDPGR 8 0 1 Unmodified _DIIHDPGR_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.7449 2 461.740691 921.466829 NaN NaN NaN -0.28217 -0.00013029 NaN NaN NaN NaN 29.608 0.74304 29.608 29.34 30.083 0 0 0 0 0.0072164 1 11544 83.206 44.414 1 NaN NaN 0 66269000 0 66269000 4895 1653 1833 1885 7652 7652 DIIHDPGR 8 0 1 Unmodified _DIIHDPGR_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 461.7408 2 461.740691 921.466829 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.523 1 29.523 29.023 30.023 1.9073E-06 0 0 0 0.011377 1 11551 75.109 43.82 1 4896 1653 1833 1885 7653 7653 DIIHYDPTK 9 1 0 Unmodified _DIIHYDPTK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.283 2 551.282389 1100.55022 NaN NaN NaN 0.7032 0.00038766 NaN NaN NaN NaN 48.833 0.28138 48.833 48.612 48.894 0 0 0 0 0.001033 1 26628 88.37 61.066 1 NaN NaN 0 14544000 14544000 0 4897 104 1834 1886 7654 7654 DIIHYDPTK 9 1 0 Unmodified _DIIHYDPTK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.2828 2 551.282389 1100.55022 80843.18 0.55995 0.00030869 0.57128 0.00031493 1.1312 0.00062363 551.282465112179 555.289752397547 47.491 0.4292 47.491 47.289 47.718 0 104 29 5 0 0 0 0.00079125 1 26438 94.309 70.881 1 1.0141 1.1146 0 42058000 20351000 21707000 4898 104 1834 1886 7655 7655 DIIHYDPTK 9 1 0 Unmodified _DIIHYDPTK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.2901 2 551.282389 1100.55022 80334.2 0.43024 0.00023718 0.51592 0.00028442 0.94616 0.0005216 551.282395768465 555.289834978163 55.6 0.78979 55.6 55.232 56.021 -3.8147E-06 171 49 7 0 0 0 0.011379 3 27804 58.433 58.433 1 1.4465 1.1344 0 3910700 1515500 2395200 4899 104 1834 1886 7656;7657;7658 7656 DIIHYDPTK 9 1 0 Unmodified _DIIHYDPTK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.29 2 551.282389 1100.55022 NaN NaN NaN 0.19926 0.00010985 NaN NaN NaN NaN 56.056 0.74769 56.056 55.635 56.382 0 0 0 0 0.020574 1 27536 58.433 25.593 1 NaN NaN 0 2063000 0 2063000 4900 104 1834 1886 7659 7659 DIIIFVGTPVQK 12 1 0 Unmodified _DIIIFVGTPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.4008 2 665.39247 1328.77039 74059.76 0.98378 0.0006546 0.13462 8.9573E-05 1.1184 0.00074417 665.392359476901 669.399593150727 113.52 0.94289 113.52 113.15 114.09 0 383 70 8 0 0 0 1.8123E-12 2 71680 125.97 114.82 1 1.716 1.9414 0 102650000 37646000 65007000 4901 1569 1835 1887 7660;7661 7660 DIIIFVGTPVQK 12 1 0 Unmodified _DIIIFVGTPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.4001 2 665.39247 1328.77039 74568.3 0.67208 0.0004472 0.27817 0.00018509 0.95026 0.00063229 665.392538090012 669.399662454304 112.96 0.9964 112.96 112.59 113.58 0 339 68 9 0 0 0 5.5677E-18 2 73022 144.65 131.2 1 1.781 2.0248 0 144730000 51119000 93615000 4902 1569 1835 1887 7662;7663 7662 DIIIFVGTPVQK 12 1 0 Unmodified _DIIIFVGTPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.4006 2 665.39247 1328.77039 74636 0.74294 0.00049435 0.34334 0.00022845 1.0863 0.0007228 665.392108755994 669.399661673549 124.4 1.6703 124.4 124.04 125.71 0 314 69 9 0 0 0 5.0945E-08 3 74423 113.93 107.26 1 3.3126 2.779 0 52469000 11735000 40734000 4903 1569 1835 1887 7664;7665;7666 7664 DIIIFVGTPVQK 12 1 0 Unmodified _DIIIFVGTPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.3926 2 665.39247 1328.77039 75014.81 0.70878 0.00047162 0.37149 0.00024719 1.0803 0.0007188 665.392352078575 669.399638536092 124.25 1.4956 124.25 123.84 125.33 0 281 62 10 0 0 0 9.3504E-05 2 73425 96.171 96.171 1 3.1991 2.671 0 42690000 9528700 33161000 4904 1569 1835 1887 7667;7668 7668 DIILGMEISAPSQQR 15 0 1 Oxidation (M) _DIILGM(ox)EISAPSQQR_ DIILGM(1)EISAPSQQR DIILGM(63.09)EISAPSQQR 0 1 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 842.4337 2 837.429987 1672.84542 66060.05 0.8382 0.00070193 -0.79258 -0.00066373 0.045611 3.8196E-05 837.429995419339 842.434476372706 90.102 0.43343 90.102 89.887 90.321 7.6294E-06 153 34 6 0 0 0 0.00010639 3 54321 63.091 41.038 1 1.2567 1.2857 0 31791000 15278000 16513000 4905 1854 1836 1888 7669;7670;7671 7670 1707 DIILGMEISAPSQQR 15 0 1 Oxidation (M) _DIILGM(ox)EISAPSQQR_ DIILGM(1)EISAPSQQR DIILGM(47.29)EISAPSQQR 0 1 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.4312 2 837.429987 1672.84542 NaN NaN NaN -0.80123 -0.00067097 NaN NaN NaN NaN 89.267 0.57187 89.267 89.055 89.627 -7.6294E-06 0 0 0 0.004453 1 55039 47.288 30.262 1 NaN NaN 0 23249000 23249000 0 4906 1854 1836 1888 7672 7672 1707 DIILQSNPLLEAFGNAK 17 1 0 Unmodified _DIILQSNPLLEAFGNAK_ 0 0 0 Q4KMR3;Q12965;Q6ZNI9;O00160;B0I1T1;Q4LE34;Q14779;B4DVP3;Q92827 Q4KMR3 Q4KMR3 MYO1E;FLJ00395;MYO1F;MYO1F variant protein Unconventional myosin-Ie;Unconventional myosin-If MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.0014 2 922.001633 1841.98871 64799.36 0.95378 0.00087938 0.076824 7.0832E-05 1.0306 0.00095022 922.503241434244 926.510315831251 132 0.61597 132 131.78 132.4 0 235 41 8 0 0 0 1.8732E-12 2 86132 113.65 104.92 1 0.90207 0.88601 0 23210000 12362000 10848000 4907 1703 1837 1889 7673;7674 7674 DIILQSNPLLEAFGNAK 17 1 0 Unmodified _DIILQSNPLLEAFGNAK_ 0 0 0 Q4KMR3;Q12965;Q6ZNI9;O00160;B0I1T1;Q4LE34;Q14779;B4DVP3;Q92827 Q4KMR3 Q4KMR3 MYO1E;FLJ00395;MYO1F;MYO1F variant protein Unconventional myosin-Ie;Unconventional myosin-If MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.0081 2 922.001633 1841.98871 64476.34 0.84355 0.00077775 0.053774 4.9579E-05 0.89732 0.00082733 922.001468193136 926.51024327068 131.62 0.58569 131.62 131.43 132.02 0 266 42 8 0 0 0 1.0969E-12 2 88012 118.48 109.53 1 0.93166 0.93751 0 27620000 13797000 13823000 4908 1703 1837 1889 7675;7676 7676 DIINEEEVQFLK 12 1 0 Unmodified _DIINEEEVQFLK_ 0 0 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.8911 2 738.882664 1475.75077 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.08 1 110.08 109.58 110.58 7.6294E-06 0 0 0 7.8233E-38 1 70807 167.93 115.38 1 4909 1583 1838 1890 7677 7677 DIINNTSLAELEK 13 1 0 Unmodified _DIINNTSLAELEK_ 0 0 0 O95453;H3BRK1;B3KN69 O95453 O95453 PARN Poly(A)-specific ribonuclease PARN MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.3925 2 730.385571 1458.75659 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.852 1 97.852 97.352 98.352 0 0 0 0 0.00063265 1 59741 82.171 44.085 1 4910 1426 1839 1891 7678 7678 DIISDTSGDFRK 12 1 1 Unmodified _DIISDTSGDFRK_ 0 0 1 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;H0YM50;A6NMY6;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1;H0YN52 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3486 2 677.335881 1352.65721 74439.55 0.4277 0.0002897 0.81587 0.00055262 1.2436 0.00084232 677.336184763841 686.34789337482 56.432 0.35415 56.432 56.252 56.606 0 82 24 5 0 0 0 0.00033416 2 32472 78.655 55.302 1 1.1886 1.3702 0 28743000 12555000 16188000 4911 193 1840 1892 7679;7680 7679 DIISIAEDEDLR 12 0 1 Unmodified _DIISIAEDEDLR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.8536 2 694.848821 1387.68309 73100.91 0.77926 0.00054147 0.082834 5.7557E-05 0.86209 0.00059903 694.848812373038 699.852894622296 104.51 1.1145 104.51 103.93 105.04 0 637 92 9 0 0 0 7.557E-09 3 64348 123.63 123.63 1 0.38767 0.4568 0 239680000 175310000 64372000 4912 82 1841 1893 7681;7682;7683 7682 DIISIAEDEDLR 12 0 1 Unmodified _DIISIAEDEDLR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.8495 2 694.848821 1387.68309 72752.67 0.56178 0.00039035 0.19077 0.00013255 0.75254 0.0005229 694.848878889932 699.852901311096 103.78 1.0338 103.78 103.39 104.42 7.6294E-06 629 86 9 0 0 0 7.8154E-13 2 65567 132.78 119.01 1 0.38722 0.44701 0 243930000 173310000 70623000 4913 82 1841 1893 7684;7685 7684 DIISIAEDEDLR 12 0 1 Unmodified _DIISIAEDEDLR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.8526 2 694.848821 1387.68309 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.61 1 104.61 104.11 105.11 0 0 0 0 0.014598 1 66306 54.471 20.674 1 4914 82 1841 1893 7686 7686 DIISIAEDEDLR 12 0 1 Unmodified _DIISIAEDEDLR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.8494 2 694.848821 1387.68309 72759.5 0.67922 0.00047196 0.022227 1.5444E-05 0.70145 0.0004874 694.848941618508 699.852930741218 116.1 0.86987 116.1 115.66 116.53 -7.6294E-06 195 36 7 0 0 0 9.6174E-05 2 68023 96.015 96.015 1 0.30143 0.25378 0 27728000 20912000 6816100 4915 82 1841 1893 7687;7688 7687 DIISIAEDEDLR 12 0 1 Unmodified _DIISIAEDEDLR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.8497 2 694.848821 1387.68309 72455.48 0.82632 0.00057417 0.073863 5.1324E-05 0.90018 0.00062549 694.848890092513 699.852782996437 116.18 1.031 116.18 115.78 116.81 0 217 48 7 0 0 0 0.00019799 2 67132 90.05 90.05 1 0.29516 0.25748 0 25758000 20226000 5531900 4916 82 1841 1893 7689;7690 7689 DIISIAEDEDLRVHFEESSK 20 1 1 Unmodified _DIISIAEDEDLRVHFEESSK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.9362 3 778.048288 2331.12303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 145.29 1 145.29 144.79 145.79 0 0 0 0 0.047024 1 92777 24.893 10.28 1 4917 82 1842 1894 7691 7691 DIISIAEDEDLRVHFEESSK 20 1 1 Unmodified _DIISIAEDEDLRVHFEESSK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 778.0488 3 778.048288 2331.12303 69834.23 0.76543 0.00059554 -0.74562 -0.00058013 0.019815 1.5417E-05 778.381724402051 784.389755227883 115.17 0.32977 115.17 114.91 115.24 0 71 15 6 0 0 0 0.0025108 1 66414 28.083 24.985 1 0.33764 0.28354 0 4846600 3499600 1347000 4918 82 1842 1894 7692 7692 DIIVEFIK 8 1 0 Unmodified _DIIVEFIK_ 0 0 0 Q8NAV1 Q8NAV1 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7896 2 488.789318 975.564084 88952.2 0.53957 0.00026373 -0.20869 -0.000102 0.33088 0.00016173 488.789217925447 492.796231076261 112.01 0.5817 112.01 111.71 112.29 0 135 41 4 0 0 0 0.013465 1 70600 65.252 43.121 1 1.4068 1.3843 0 8641000 4205800 4435200 4919 1917 1843 1895 7693 7693 DIIVEFIK 8 1 0 Unmodified _DIIVEFIK_ 0 0 0 Q8NAV1 Q8NAV1 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.7893 2 488.789318 975.564084 89014.18 0.43075 0.00021055 -0.12447 -6.084E-05 0.30628 0.00014971 488.789165269234 492.796280399832 111.39 0.54274 111.39 111.12 111.66 0 115 36 4 0 0 0 0.014233 1 71826 63.48 45.101 1 1.1637 1.1965 0 9527100 4388100 5139000 4920 1917 1843 1895 7694 7694 DIIVIGNDITYR 12 0 1 Unmodified _DIIVIGNDITYR_ 0 0 0 A0A024R0Y2;B2ZZ90;Q13085;Q7Z5W8;Q59FY4 A0A024R0Y2 A0A024R0Y2 hCG_30204;ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.3842 2 696.380091 1390.74563 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.71 1 105.71 105.21 106.21 0 0 0 0 0.015996 1 65523 53.683 25.941 1 4921 60 1844 1896 7695 7695 DIIVIGNDITYR 12 0 1 Unmodified _DIIVIGNDITYR_ 0 0 0 A0A024R0Y2;B2ZZ90;Q13085;Q7Z5W8;Q59FY4 A0A024R0Y2 A0A024R0Y2 hCG_30204;ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3848 2 696.380091 1390.74563 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.04 1 105.04 104.54 105.54 0 0 0 0 0.0010164 1 66645 73.067 45.324 1 4922 60 1844 1896 7696 7696 DIIVIGNDITYR 12 0 1 Unmodified _DIIVIGNDITYR_ 0 0 0 A0A024R0Y2;B2ZZ90;Q13085;Q7Z5W8;Q59FY4 A0A024R0Y2 A0A024R0Y2 hCG_30204;ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3865 2 696.380091 1390.74563 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.07 1 105.07 104.57 105.57 0 0 0 0 0.0056194 1 66666 63.283 26.59 1 4923 60 1844 1896 7697 7697 DIIVIGNDITYR 12 0 1 Unmodified _DIIVIGNDITYR_ 0 0 0 A0A024R0Y2;B2ZZ90;Q13085;Q7Z5W8;Q59FY4 A0A024R0Y2 A0A024R0Y2 hCG_30204;ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3813 2 696.380091 1390.74563 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.34 1 105.34 104.84 105.84 0 0 0 0 0.035296 1 66879 44.318 11.997 1 4924 60 1844 1896 7698 7698 DIKPENLLLGLK 12 2 0 Unmodified _DIKPENLLLGLK_ 0 0 1 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.9254 2 676.911027 1351.8075 74148.61 0.82556 0.00055883 0.15698 0.00010626 0.98254 0.00066509 676.911250470891 684.925154009001 109.01 0.98615 109.01 108.62 109.6 7.6294E-06 384 65 9 0 0 0 0.027245 1 67928 51.927 51.927 1 1.0516 1.2406 0 221850000 108030000 113830000 4925 881;1967 1845 1897 7699 7699 DIKPENLLLGLK 12 2 0 Unmodified _DIKPENLLLGLK_ 0 0 1 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.61 3 451.609777 1351.8075 89785.2 0.41117 0.00018569 -0.34097 -0.00015398 0.070201 3.1704E-05 451.609488399861 456.952442095111 108.97 0.5489 108.97 108.69 109.24 0 94 33 4 0 0 0 0.0024494 1 68025 51.286 51.286 1 1.1138 1.3185 0 15895000 6844500 9050300 4926 881;1967 1845 1897 7700 7700 DIKPENLLLGLK 12 2 0 Unmodified _DIKPENLLLGLK_ 0 0 1 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 676.9112 2 676.911027 1351.8075 74148.77 0.65788 0.00044532 0.055 3.723E-05 0.71288 0.00048255 676.911157324969 684.925118384917 108.25 0.91205 108.25 107.85 108.76 0 407 63 9 0 0 0 0.03417 1 69038 66.55 66.55 1 1.1046 1.2867 0 230470000 106460000 124000000 4927 881;1967 1845 1897 7701 7701 DIKPENLLLGLK 12 2 0 Unmodified _DIKPENLLLGLK_ 0 0 1 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.6096 3 451.609777 1351.8075 90900.98 0.22766 0.00010281 -0.15704 -7.0921E-05 0.07062 3.1893E-05 451.609686951155 456.952399434061 108.23 0.54215 108.23 107.96 108.5 0 170 38 6 0 0 0 0.012723 1 69225 36.32 36.32 1 1.1088 1.2736 0 23017000 10871000 12146000 4928 881;1967 1845 1897 7702 7702 DIKPENLLLGLK 12 2 0 Unmodified _DIKPENLLLGLK_ 0 0 1 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.9257 2 676.911027 1351.8075 73463.62 0.8416 0.00056969 -0.090693 -6.1391E-05 0.75091 0.0005083 676.911079736646 684.925083427379 119.72 1.135 119.72 119.44 120.57 0 250 51 10 0 0 0 0.0012229 2 70842 84.198 84.198 1 2.0614 1.7428 0 101950000 35056000 66897000 4929 881;1967 1845 1897 7703;7704 7703 DIKPENLLLGLK 12 2 0 Unmodified _DIKPENLLLGLK_ 0 0 1 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 451.6101 3 451.609777 1351.8075 89689.77 0.4395 0.00019848 -0.21411 -9.6695E-05 0.22538 0.00010179 451.609669467571 456.952425028569 119.74 0.41724 119.74 119.5 119.92 0 93 20 7 0 0 0 0.0015582 1 70918 56.205 56.205 1 1.8844 1.6183 0 7316300 2641600 4674700 4930 881;1967 1845 1897 7705 7705 DIKPENLLLGLK 12 2 0 Unmodified _DIKPENLLLGLK_ 0 0 1 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 676.9117 2 676.911027 1351.8075 73373.38 0.6657 0.00045062 0.080585 5.4549E-05 0.74628 0.00050517 676.91116418236 684.925223622398 119.44 1.0854 119.44 119.2 120.28 -7.6294E-06 230 48 9 0 0 0 0.0012831 2 69808 100.55 100.55 1 2.1846 1.8715 0 114680000 36773000 77905000 4931 881;1967 1845 1897 7706;7707 7707 DIKPENLLLGSAGELK 16 2 0 Unmodified _DIKPENLLLGSAGELK_ 0 0 1 O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.6635 3 566.320843 1695.9407 81664.87 0.79022 0.00044752 -0.34229 -0.00019385 0.44793 0.00025367 566.655153579265 571.663257702822 105.06 0.54747 105.06 104.71 105.26 -7.6294E-06 150 43 5 0 0 0 0.012662 1 66612 25.054 25.054 1 1.0103 1.1539 0 14298000 6319200 7979200 4932 1369 1846 1898 7708 7708 DIKPENLLLGSAGELK 16 2 0 Unmodified _DIKPENLLLGSAGELK_ 0 0 1 O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.6635 3 566.320843 1695.9407 82657.46 0.39135 0.00022163 -0.034255 -1.9399E-05 0.3571 0.00020223 566.320691253508 571.663634069345 116.74 0.4355 116.74 116.5 116.94 7.6294E-06 71 16 8 0 0 0 0.0363 1 68604 21 21 1 1.1187 0.9683 0 3706100 1561100 2145000 4933 1369 1846 1898 7709 7709 DIKPENLLLGSAGELK 16 2 0 Unmodified _DIKPENLLLGSAGELK_ 0 0 1 O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.4799 2 848.977627 1695.9407 67642.17 0.49138 0.00041717 0.44886 0.00038107 0.94023 0.00079824 848.978431640377 856.992295203442 116.74 0.4355 116.74 116.5 116.94 0 74 16 8 0 0 0 0.048082 1 68624 34.179 29.838 1 1.2896 1.1089 0 6654300 3364400 3289900 4934 1369 1846 1898 7710 7710 DILADLIPK 9 1 0 Unmodified _DILADLIPK_ 0 0 0 B4DJV2;A0A024RB75;O75390;F8W0J2;F8VP03;F8VWQ5;F8VU34;F8VR34;F8VTT8;F8W4S1;F8W031 B4DJV2 B4DJV2 CS Citrate synthase;Citrate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.3062 2 499.30005 996.585547 88660.06 0.42205 0.00021073 -1.5381 -0.00076798 -1.1161 -0.00055725 499.299888672193 503.305943719424 122.32 0.72932 122.32 121.99 122.72 -7.6294E-06 120 52 5 0 0 0 0.040397 1 79140 41.876 25.336 1 3.7408 4.0278 0 3506400 937470 2569000 4935 326 1847 1899 7711 7711 DILADLIPK 9 1 0 Unmodified _DILADLIPK_ 0 0 0 B4DJV2;A0A024RB75;O75390;F8W0J2;F8VP03;F8VWQ5;F8VU34;F8VR34;F8VTT8;F8W4S1;F8W031 B4DJV2 B4DJV2 CS Citrate synthase;Citrate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.3066 2 499.30005 996.585547 86840.75 0.36167 0.00018058 -1.2341 -0.00061616 -0.87239 -0.00043558 499.30001886732 503.306149872549 121.83 0.46893 121.83 121.57 122.04 0 100 32 5 0 0 0 0.027097 1 80674 47.198 30.658 1 2.2533 2.2401 0 6198400 1815300 4383200 4936 326 1847 1899 7712 7712 DILAVLTMK 9 1 0 Oxidation (M) _DILAVLTM(ox)K_ DILAVLTM(1)K DILAVLTM(66.69)K 0 1 0 Q0VDF9 Q0VDF9 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.301 2 510.293911 1018.57327 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.5 1 110.5 110 111 0 0 0 0 0.0031501 1 71143 66.692 38.518 1 4937 1697 1848 1900 7713 7713 1530 DILCGAADEVLAVLK 15 1 0 Unmodified _DILCGAADEVLAVLK_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.9052 2 793.926548 1585.83854 NaN NaN NaN -0.17834 -0.00014158 NaN NaN NaN NaN 133.6 0.22647 133.6 133.4 133.63 0 0 0 0 0.033051 1 89837 40.015 13.897 1 NaN NaN 0 21877000 21877000 0 4938 1411 1849 1901 7714 7714 DILDEEK 7 1 0 Unmodified _DILDEEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.2203 2 431.21364 860.412728 93112.32 0.10456 4.5086E-05 0.31699 0.00013669 0.42155 0.00018178 431.213655947035 435.220686048973 39.062 1.0136 39.062 38.493 39.507 0 325 82 6 0 0 0 0.03421 1 20013 62.717 7.2762 1 1.0044 1.0786 0 32756000 16278000 16478000 4939 897 1850 1902 7715 7715 DILDEEK 7 1 0 Unmodified _DILDEEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.2206 2 431.21364 860.412728 93024.93 -0.1949 -8.4042E-05 0.44014 0.0001898 0.24525 0.00010575 431.213740428392 435.220738055809 37.994 0.9197 37.994 37.615 38.535 0 264 72 5 0 0 0 0.03153 1 19884 66.993 16.027 1 0.99515 1.1016 0 45650000 22678000 22972000 4940 897 1850 1902 7716 7716 DILELGGPEGDAASGTISK 19 1 0 Unmodified _DILELGGPEGDAASGTISK_ 0 0 0 B4DQG8;Q9NPF5;Q5TG40;B4DTH3;B4DEF2;B4DTU6;Q5TG38;Q5TG39;Q5TG36;B4DU03 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.9244 2 915.459995 1828.90544 65094.45 0.95629 0.00087544 -1.3291 -0.0012167 -0.37281 -0.0003413 915.960013578358 919.465639456315 96.836 0.47886 96.836 96.639 97.118 0 144 38 5 0 0 0 5.797E-06 1 60346 69.716 69.716 1 0.73321 0.7573 0 18408000 11615000 6793200 4941 1024 1851 1903 7717 7717 DILELGGPEGDAASGTISK 19 1 0 Unmodified _DILELGGPEGDAASGTISK_ 0 0 0 B4DQG8;Q9NPF5;Q5TG40;B4DTH3;B4DEF2;B4DTU6;Q5TG38;Q5TG39;Q5TG36;B4DU03 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 919.4679 2 915.459995 1828.90544 61971.42 0.62013 0.0005677 -0.27736 -0.00025391 0.34277 0.00031379 915.458844628626 919.467019548147 110.06 0.4597 110.06 109.8 110.26 0 99 23 7 0 0 0 0.00025027 1 63471 45.207 45.207 1 1.2329 0.97692 0 4848100 2278500 2569600 4942 1024 1851 1903 7718 7718 DILELGGPEGDAASGTISK 19 1 0 Unmodified _DILELGGPEGDAASGTISK_ 0 0 0 B4DQG8;Q9NPF5;Q5TG40;B4DTH3;B4DEF2;B4DTU6;Q5TG38;Q5TG39;Q5TG36;B4DU03 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 915.9605 2 915.459995 1828.90544 63149.22 0.63184 0.00057842 -0.064589 -5.9128E-05 0.56725 0.0005193 915.960574968766 919.467146381774 109.97 0.52718 109.97 109.74 110.27 7.6294E-06 116 27 6 0 0 0 0.0075608 1 62642 29.013 29.013 1 1.3953 1.1284 0 4348400 2060900 2287500 4943 1024 1851 1903 7719 7719 DILETHLR 8 0 1 Unmodified _DILETHLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.7811 2 498.777274 995.539994 85925.1 0.24575 0.00012258 0.19019 9.4863E-05 0.43594 0.00021744 498.777414076235 503.781352665625 51.062 0.75266 51.062 50.678 51.431 0 282 59 7 0 0 0 0.0075008 2 28767 82.671 65.378 1 0.54651 0.62249 0 106080000 65392000 40688000 4944 1665 1852 1904 7720;7721 7721 DILETHLR 8 0 1 Unmodified _DILETHLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 503.7811 2 498.777274 995.539994 85570.33 0.13891 6.9286E-05 -0.33943 -0.0001693 -0.20052 -0.00010002 498.77697779974 503.781275281919 59.887 0.74586 59.887 59.515 60.261 0 257 50 7 0 0 0 0.008243 1 30519 79.469 60.686 1 0.3191 0.26171 0 12423000 9440300 2983100 4945 1665 1852 1904 7722 7722 DILETHLR 8 0 1 Unmodified _DILETHLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 503.7811 2 498.777274 995.539994 85856.71 0.061856 3.0852E-05 -0.34391 -0.00017153 -0.28205 -0.00014068 498.776993310939 503.781233890664 60.219 0.73588 60.219 59.87 60.606 0 221 54 7 0 0 0 0.017078 1 30065 60.682 50.695 1 0.31826 0.26031 0 13204000 9995700 3208400 4946 1665 1852 1904 7723 7723 DILHATFEESLDK 13 1 0 Unmodified _DILHATFEESLDK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BRD0 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.3762 2 759.377746 1516.74094 NaN NaN NaN -0.55043 -0.00041799 NaN NaN NaN NaN 93.01 0.28607 93.01 92.799 93.085 0 0 0 0 0.0039328 1 57608 63.32 47.749 1 NaN NaN 0 8994600 8994600 0 4947 1699 1853 1905 7724 7724 DILIQYDR 8 0 1 Unmodified _DILIQYDR_ 0 0 0 P62249;M0R210;A0A087WZ27 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.2803 2 518.277106 1034.53966 85253.97 0.37629 0.00019502 -0.32816 -0.00017008 0.048126 2.4943E-05 518.276904369244 523.280976003082 74.083 2.0444 74.083 73.086 75.13 0 916 180 8 0 0 0 0.00097085 5 43294 121.99 56.458 1 1.0319 1.1772 0 120900000 64528000 56371000 4948 1636 1854 1906 7725;7726;7727;7728;7729 7726 DILIQYDR 8 0 1 Unmodified _DILIQYDR_ 0 0 0 P62249;M0R210;A0A087WZ27 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.2782 2 518.277106 1034.53966 NaN NaN NaN -0.20689 -0.00010723 NaN NaN NaN NaN 73.425 1.9931 73.425 72.192 74.185 0 0 0 0 0.010317 3 43380 77.058 33.811 1 NaN NaN 0 83349000 83349000 0 4949 1636 1854 1906 7730;7731;7732 7730 DILIQYDR 8 0 1 Unmodified _DILIQYDR_ 0 0 0 P62249;M0R210;A0A087WZ27 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.2809 2 518.277106 1034.53966 84901.91 0.25513 0.00013223 -0.078743 -4.0811E-05 0.17639 9.1419E-05 518.276972574856 523.281071485277 83.931 1.9337 83.931 83.293 85.227 0 569 145 6 0 0 0 0.0069463 4 45932 85.064 41.818 1 0.87659 0.71589 0 15731000 8446900 7284400 4950 1636 1854 1906 7733;7734;7735;7736 7736 DILIQYDR 8 0 1 Unmodified _DILIQYDR_ 0 0 0 P62249;M0R210;A0A087WZ27 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.2773 2 518.277106 1034.53966 83262.6 0.45087 0.00023368 -0.16326 -8.4614E-05 0.28761 0.00014906 518.27695543674 523.281050391891 84.202 1.874 84.202 83.447 85.321 0 496 135 5 0 0 0 0.010329 3 45295 72.485 29.238 1 0.85647 0.70664 0 14421000 7211400 7209300 4951 1636 1854 1906 7737;7738;7739 7739 DILLQGLK 8 1 0 Unmodified _DILLQGLK_ 0 0 0 A8K245;Q99986;H0YJ50;H0YJJ9 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.2882 2 450.28166 898.548768 NaN NaN NaN -0.34044 -0.0001533 NaN NaN NaN NaN 90.531 0.66372 90.531 90.038 90.702 7.6294E-06 0 0 0 0.0093492 2 54537 78.616 29.026 1 NaN NaN 0 13219000 0 13219000 4952 707 1855 1907 7740;7741 7741 DILLQGLK 8 1 0 Unmodified _DILLQGLK_ 0 0 0 A8K245;Q99986;H0YJ50;H0YJJ9 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.2815 2 450.28166 898.548768 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.749 1 90.749 90.249 91.249 0 0 0 0 0.0093828 1 54855 77.741 27.109 1 4953 707 1855 1907 7742 7742 DILLQGLK 8 1 0 Unmodified _DILLQGLK_ 0 0 0 A8K245;Q99986;H0YJ50;H0YJJ9 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.2814 2 450.28166 898.548768 92311.55 0.14615 6.5807E-05 -0.038547 -1.7357E-05 0.1076 4.845E-05 450.281557455457 454.288554342284 89.714 0.83778 89.714 89.095 89.933 0 219 68 5 0 0 0 0.011877 2 55062 68.915 30.123 1 1.4664 1.4866 0 26476000 11549000 14927000 4954 707 1855 1907 7743;7744 7744 DILLQQQQQLGHGGPEAAPR 20 0 1 Unmodified _DILLQQQQQLGHGGPEAAPR_ 0 0 0 Q7Z5L9 Q7Z5L9 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.3844 3 719.378414 2155.11341 72512.3 0.63469 0.00045658 -0.12644 -9.096E-05 0.50825 0.00036563 719.378070585035 722.714589830701 67.955 0.30693 67.955 67.825 68.131 0 99 27 5 0 0 0 3.4697E-05 1 40289 43.12 43.12 1 1.4292 1.4414 0 9409600 5543200 3866500 4955 1880 1856 1908 7745 7745 DILLRPELEELR 12 0 2 Unmodified _DILLRPELEELR_ 0 0 1 A0A024R4X0;P00387;Q6ZVI6 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2973 3 499.287474 1494.84059 85664.01 0.17112 8.5438E-05 0.469 0.00023416 0.64012 0.0003196 499.287520315797 505.959750404285 102.64 0.83086 102.64 102.17 103 0 283 70 6 0 0 0 0.01374 1 62973 30.438 30.438 1 0.97066 1.0476 0 18082000 9879900 8202200 4956 164 1857 1909 7746 7746 DILLRPELEELR 12 0 2 Unmodified _DILLRPELEELR_ 0 0 1 A0A024R4X0;P00387;Q6ZVI6 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.297 3 499.287474 1494.84059 85574.51 0.33388 0.0001667 0.92382 0.00046125 1.2577 0.00062796 499.287480944007 505.959663225236 101.56 1.1218 101.56 100.81 101.94 0 326 88 6 0 0 0 0.0056414 1 63813 33.227 33.227 1 1.0957 1.2449 0 35908000 16072000 19836000 4957 164 1857 1909 7747 7747 DILLRPELEELR 12 0 2 Unmodified _DILLRPELEELR_ 0 0 1 A0A024R4X0;P00387;Q6ZVI6 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.3627 2 748.427573 1494.84059 69448.34 0.6824 0.00051073 0.58392 0.00043702 1.2663 0.00094775 748.930321108628 758.435859517776 101.65 0.80849 101.65 101.21 102.02 -7.6294E-06 189 64 5 0 0 0 0.041758 1 63935 52.725 52.725 1 0.75696 0.8166 0 16598000 9071100 7526800 4958 164 1857 1909 7748 7748 DILLRPELEELR 12 0 2 Unmodified _DILLRPELEELR_ 0 0 1 A0A024R4X0;P00387;Q6ZVI6 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.9601 3 499.287474 1494.84059 85710.8 0.28158 0.00014059 -0.012722 -6.352E-06 0.26885 0.00013424 499.287417853588 505.95950783033 113.58 0.45921 113.58 113.33 113.79 0 100 21 6 0 0 0 0.041953 1 65220 20.953 20.953 1 0.63726 0.57633 0 3539200 2338100 1201100 4959 164 1857 1909 7749 7749 DILLVNDHLLNFVR 14 0 1 Unmodified _DILLVNDHLLNFVR_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.9862 3 560.985907 1679.93589 89669.16 0.88519 0.00049658 -0.45309 -0.00025418 0.4321 0.0002424 560.985561062609 564.321855258101 121.87 0.40112 121.87 121.78 122.18 0 71 27 4 0 0 0 6.9199E-05 2 78844 65.805 65.805 1 0.63905 0.65051 0 7126400 4064200 3062200 4960 2069 1858 1910 7750;7751 7750 DILLVNDHLLNFVR 14 0 1 Unmodified _DILLVNDHLLNFVR_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.9868 3 560.985907 1679.93589 84513.11 1.1088 0.00062202 -0.36843 -0.00020668 0.74037 0.00041534 561.319920602068 564.321480169742 121.27 0.33914 121.27 121.09 121.42 0 71 21 5 0 0 0 1.0251E-05 1 80265 95.631 95.631 1 0.52284 0.53346 0 5192400 3278000 1914400 4961 2069 1858 1910 7752 7752 DILLVNDHLLNFVR 14 0 1 Unmodified _DILLVNDHLLNFVR_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.986 3 560.985907 1679.93589 83088.72 0.72371 0.00040599 -0.43006 -0.00024126 0.29365 0.00016473 560.985766889853 564.321583874447 133.62 0.39308 133.62 133.39 133.79 0 51 15 6 0 0 0 0.0094125 2 81406 30.961 30.961 1 0.66694 0.58966 0 1180800 824790 356030 4962 2069 1858 1910 7753;7754 7753 DILLVNDHLLNFVR 14 0 1 Unmodified _DILLVNDHLLNFVR_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.9858 3 560.985907 1679.93589 85194.14 1.0795 0.00060559 -0.27076 -0.00015189 0.80875 0.0004537 561.320502471583 564.321700156278 133.31 0.28244 133.31 133.19 133.47 0 31 9 6 0 0 0 0.0046294 1 80257 35.35 35.35 1 0.46993 0.41166 0 1347900 1004600 343280 4963 2069 1858 1910 7755 7755 DILLVNDHLLNFVR 14 0 1 Unmodified _DILLVNDHLLNFVR_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 841.4783 2 840.975222 1679.93589 69064.75 1.0698 0.00089967 -0.011402 -9.5886E-06 1.0584 0.00089008 840.975096311617 845.979532012193 133.3 0.31047 133.3 133.19 133.5 0 45 10 7 0 0 0 0.0012688 1 80308 53.569 53.569 1 0.42729 0.38503 0 2234600 1615300 619210 4964 2069 1858 1910 7756 7756 DILPCLDGYLK 11 1 0 Unmodified _DILPCLDGYLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.8472 2 653.839213 1305.66387 73561.16 1.2844 0.00083982 -0.099457 -6.5029E-05 1.185 0.00077479 653.838973153831 657.846367450617 119.04 0.61293 119.04 118.8 119.41 0 199 38 8 0 0 0 0.00046386 2 76448 76.465 76.465 1 0.60347 0.63338 0 30367000 19165000 11202000 4965 1665 1859 1911 7757;7758 7758 DILPCLDGYLK 11 1 0 Unmodified _DILPCLDGYLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.84 2 653.839213 1305.66387 74949.8 0.74243 0.00048543 -0.17401 -0.00011378 0.56842 0.00037165 654.340542429822 657.846279463278 118.67 0.61816 118.67 118.33 118.95 0 185 34 7 0 0 0 0.00090896 2 77981 84.213 84.213 1 0.61348 0.68144 0 49814000 29777000 20037000 4966 1665 1859 1911 7759;7760 7759 DILPCLDGYLK 11 1 0 Unmodified _DILPCLDGYLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.8393 2 653.839213 1305.66387 75142.34 0.76285 0.00049878 0.27785 0.00018167 1.0407 0.00068045 653.83942649884 657.846640548339 130.97 0.61838 130.97 130.7 131.32 0 143 26 8 0 0 0 0.0078613 1 79360 61.65 61.65 1 0.32489 0.2539 0 16201000 12377000 3823900 4967 1665 1859 1911 7761 7761 DILPCLDGYLK 11 1 0 Unmodified _DILPCLDGYLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.8397 2 653.839213 1305.66387 75151.47 0.97365 0.00063661 0.020385 1.3329E-05 0.99404 0.00064994 653.839388535611 657.8465951694 130.76 0.61221 130.76 130.55 131.16 0 163 26 9 0 0 0 0.05228 1 78326 41.54 41.54 1 0.31027 0.24845 0 20630000 15698000 4931400 4968 1665 1859 1911 7762 7762 DILQNVFK 8 1 0 Unmodified _DILQNVFK_ 0 0 0 A0A024RAV2;P46063;F5H2L2;F8WA66;F8WD97;F5H4P4;F5H3W0 A0A024RAV2 A0A024RAV2 RECQL ATP-dependent DNA helicase Q1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.7839 2 488.776742 975.538931 NaN NaN NaN 0.11155 5.4521E-05 NaN NaN NaN NaN 102.27 0.79883 102.27 102.01 102.81 -7.6294E-06 0 0 0 0.020957 1 62900 64.803 26.565 1 NaN NaN 0 4919400 0 4919400 4969 314 1860 1912 7763 7763 DILQNVFK 8 1 0 Unmodified _DILQNVFK_ 0 0 0 A0A024RAV2;P46063;F5H2L2;F8WA66;F8WD97;F5H4P4;F5H3W0 A0A024RAV2 A0A024RAV2 RECQL ATP-dependent DNA helicase Q1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.7838 2 488.776742 975.538931 89312.98 0.2923 0.00014287 0.005875 2.8715E-06 0.29818 0.00014574 488.776706927105 492.783802787247 101.6 0.78704 101.6 101.29 102.08 0 187 61 5 0 0 0 0.011674 2 63942 69.383 26.317 1 0.94287 0.95838 0 12643000 5619200 7023800 4970 314 1860 1912 7764;7765 7765 DILQNVFK 8 1 0 Unmodified _DILQNVFK_ 0 0 0 A0A024RAV2;P46063;F5H2L2;F8WA66;F8WD97;F5H4P4;F5H3W0 A0A024RAV2 A0A024RAV2 RECQL ATP-dependent DNA helicase Q1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.784 2 488.776742 975.538931 88567.91 0.55642 0.00027197 0.24914 0.00012177 0.80556 0.00039374 488.776766538118 492.783922215047 114.44 0.57496 114.44 114.18 114.76 7.6294E-06 76 24 4 0 0 0 0.034605 2 66849 49.358 7.4798 1 0.86276 0.70692 0 2451500 1208000 1243500 4971 314 1860 1912 7766;7767 7767 DILQNVFK 8 1 0 Unmodified _DILQNVFK_ 0 0 0 A0A024RAV2;P46063;F5H2L2;F8WA66;F8WD97;F5H4P4;F5H3W0 A0A024RAV2 A0A024RAV2 RECQL ATP-dependent DNA helicase Q1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.7767 2 488.776742 975.538931 86934.3 0.3854 0.00018837 0.10845 5.301E-05 0.49385 0.00024138 488.776799464668 492.783757625829 114.36 0.5204 114.36 114.1 114.62 0 68 21 4 0 0 0 0.052285 1 65805 42.914 4.6763 1 0.97146 0.80371 0 1824600 925820 898800 4972 314 1860 1912 7768 7768 DILTAIAADLCK 12 1 0 Unmodified _DILTAIAADLCK_ 0 0 0 J3QRD1;Q59H65;P51648;J3QKK9;K7EN73;J3KTG1;C9JGJ2;I3L0X1 J3QRD1 J3QRD1 ALDH3A2 Fatty aldehyde dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.3501 2 652.349945 1302.68534 76334.47 0.86916 0.000567 -0.67384 -0.00043958 0.19532 0.00012742 652.34927529561 656.356531120696 131.62 0.50783 131.62 131.32 131.83 0 103 32 5 0 0 0 2.3371E-08 3 85847 120.09 120.09 1 1.4139 1.3929 0 9159000 3825600 5333400 4973 1338 1861 1913 7769;7770;7771 7771 DILTAIAADLCK 12 1 0 Unmodified _DILTAIAADLCK_ 0 0 0 J3QRD1;Q59H65;P51648;J3QKK9;K7EN73;J3KTG1;C9JGJ2;I3L0X1 J3QRD1 J3QRD1 ALDH3A2 Fatty aldehyde dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.3579 2 652.349945 1302.68534 76887.22 1.1482 0.00074902 -0.30934 -0.0002018 0.83885 0.00054722 652.349606054378 656.356944994926 131.19 0.40311 131.19 130.96 131.37 0 121 29 6 0 0 0 9.1081E-06 1 87672 108.47 108.47 1 1.3255 1.3504 0 12278000 5715400 6562400 4974 1338 1861 1913 7772 7772 DILVATDVAGR 11 0 1 Unmodified _DILVATDVAGR_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.3188 2 565.31422 1128.61389 NaN NaN NaN -0.010647 -6.0189E-06 NaN NaN NaN NaN 78.837 0.44095 78.837 78.619 79.06 0 0 0 0 0.001131 1 46781 85.533 53.213 1 NaN NaN 0 12787000 0 12787000 4975 63 1862 1914 7773 7773 DILVATDVAGR 11 0 1 Unmodified _DILVATDVAGR_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.3149 2 565.31422 1128.61389 79938.91 0.68925 0.00038964 -0.30888 -0.00017461 0.38037 0.00021503 565.313981920208 570.318178909117 78.004 0.55216 78.004 77.663 78.215 -7.6294E-06 175 47 5 0 0 0 2.8475E-06 2 47203 111.61 72.644 1 0.8414 0.86402 0 21160000 11052000 10108000 4976 63 1862 1914 7774;7775 7774 DILVATDVAGR 11 0 1 Unmodified _DILVATDVAGR_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.3198 2 565.31422 1128.61389 80854.95 0.67206 0.00037992 -0.09773 -5.5248E-05 0.57433 0.00032468 565.313630110548 570.318368611234 89.4 0.78792 89.4 88.978 89.766 0 149 50 4 0 0 0 0.0073711 1 49400 52.725 30.639 1 0.75392 0.65361 0 2060600 1092700 967900 4977 63 1862 1914 7776 7776 DILVEVNHPFIVK 13 1 0 Unmodified _DILVEVNHPFIVK_ 0 0 0 B4DKZ2;B4DG22;B7ZB17;P51812;B1AXG1;B1AXG2;Q9UK32 B4DKZ2 B4DKZ2 RPS6KA3;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.9426 2 761.935034 1521.85551 72279.21 0.67724 0.00051601 0.048494 3.695E-05 0.72573 0.00055296 762.436883003666 765.942007183572 101.58 0.52342 101.58 101.35 101.88 -7.6294E-06 111 41 5 0 0 0 9.3779E-05 1 63899 93.096 85.529 1 1.8254 1.9017 0 19084000 3556300 15528000 4978 971 1863 1915 7777 7777 DINAVLIDMER 11 0 1 Oxidation (M) _DINAVLIDM(ox)ER_ DINAVLIDM(1)ER DINAVLIDM(64.37)ER 0 1 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.7928 2 652.829377 1303.6442 76379.94 0.62287 0.00040663 -0.64869 -0.00042348 -0.02582 -1.6856E-05 652.829187825978 657.833109781855 84.721 0.55399 84.721 84.439 84.993 0 91 46 4 0 0 0 0.023018 1 52046 64.374 39.519 1 2.8869 2.9069 0 10769000 2159200 8609700 4979 5 1864 1916 7778 7778 2 DINAYNCEEPTEK 13 1 0 Unmodified _DINAYNCEEPTEK_ 0 0 0 V9HWC7;P30041 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.8462 2 791.838127 1581.6617 68398.56 0.96077 0.00076077 0.87337 0.00069157 1.8341 0.0014523 791.838671514849 795.846245352826 38.846 0.43288 38.846 38.661 39.093 0 120 35 6 0 0 0 0.00012338 1 20073 94.767 91.004 1 7.0984 7.366 0 12549000 2288200 10261000 4980 1527 1865 1917 7779 7779 DINAYNCEEPTEK 13 1 0 Unmodified _DINAYNCEEPTEK_ 0 0 0 V9HWC7;P30041 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.8455 2 791.838127 1581.6617 NaN NaN NaN 0.4056 0.00032117 NaN NaN NaN NaN 37.999 0.53014 37.999 37.749 38.279 0 0 0 0 7.5789E-09 1 19833 108.35 100.97 1 NaN NaN 0 13450000 0 13450000 4981 1527 1865 1917 7780 7780 DINAYNCEEPTEK 13 1 0 Unmodified _DINAYNCEEPTEK_ 0 0 0 V9HWC7;P30041 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.8464 2 791.838127 1581.6617 69862.99 0.59399 0.00047034 0.91482 0.00072439 1.5088 0.0011947 791.838517228403 795.84604495249 44.952 0.49352 44.952 44.691 45.185 0 126 37 5 0 0 0 0.023241 1 21421 47.844 46.257 1 3.8867 3.222 0 2296700 566840 1729900 4982 1527 1865 1917 7781 7781 DINAYNCEEPTEK 13 1 0 Unmodified _DINAYNCEEPTEK_ 0 0 0 V9HWC7;P30041 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 795.847 2 791.838127 1581.6617 NaN NaN NaN 0.32542 0.00025768 NaN NaN NaN NaN 45.328 0.58518 45.328 45.086 45.671 0 0 0 0 0.01781 1 21103 49.081 42.391 1 NaN NaN 0 1489400 0 1489400 4983 1527 1865 1917 7782 7782 DINESDEVEVYSR 13 0 1 Unmodified _DINESDEVEVYSR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.8492 2 777.849549 1553.68455 69258.54 0.57861 0.00045007 0.1855 0.00014429 0.76411 0.00059436 777.849622754999 782.853796006398 61.703 0.81232 61.703 61.281 62.093 0 337 65 7 0 0 0 9.6148E-06 2 35152 100.55 100.55 1 1.2021 1.3135 0 52248000 23767000 28481000 4984 1689 1866 1918 7783;7784 7784 DINESDEVEVYSR 13 0 1 Unmodified _DINESDEVEVYSR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.8502 2 777.849549 1553.68455 69283.02 0.34736 0.00027019 0.28741 0.00022357 0.63477 0.00049376 777.849728560101 782.853614424714 60.852 0.8675 60.852 60.355 61.222 0 303 73 6 0 0 0 2.0772E-06 3 35786 110.08 110.08 1 1.1882 1.2994 0 34836000 15274000 19561000 4985 1689 1866 1918 7785;7786;7787 7787 DINESDEVEVYSR 13 0 1 Unmodified _DINESDEVEVYSR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 782.8546 2 777.849549 1553.68455 69504.88 0.43903 0.0003415 0.39256 0.00030535 0.83159 0.00064685 777.849794743836 782.853852280487 71.293 0.70065 71.293 70.921 71.622 0 281 46 8 0 0 0 0.0018368 1 37398 56.205 56.205 1 1.4295 1.1908 0 10667000 4334500 6332400 4986 1689 1866 1918 7788 7788 DINESDEVEVYSR 13 0 1 Unmodified _DINESDEVEVYSR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 782.8541 2 777.849549 1553.68455 69295.98 0.22691 0.0001765 0.51844 0.00040327 0.74535 0.00057977 777.849881166641 782.854034546532 71.948 0.56865 71.948 71.69 72.258 0 209 41 7 0 0 0 0.00075063 2 37094 60.628 60.478 1 1.4716 1.2102 0 8567300 3309000 5258400 4987 1689 1866 1918 7789;7790 7789 DINLQDEDWNEFNDINK 17 1 0 Unmodified _DINLQDEDWNEFNDINK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1061.9733 2 1061.47162 2120.92869 61231.04 0.53931 0.00057246 -0.021947 -2.3296E-05 0.51736 0.00054917 1061.9739383631 1065.97945629891 109.54 0.46546 109.54 109.36 109.83 0 154 36 6 0 0 0 0.0012195 1 68545 56.951 54.001 1 0.77054 0.78175 0 13447000 6468600 6978700 4988 1854 1867 1919 7791 7791 DINLQDEDWNEFNDINK 17 1 0 Unmodified _DINLQDEDWNEFNDINK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1061.9734 2 1061.47162 2120.92869 61594 0.66069 0.00070131 -0.1459 -0.00015486 0.5148 0.00054644 1061.97389702341 1065.47770918866 109.19 0.40687 109.19 108.97 109.37 0 128 28 6 0 0 0 6.6894E-05 2 69955 89.959 89.959 1 0.61284 0.61388 0 15734000 9998400 5735900 4989 1854 1867 1919 7792;7793 7792 DINLQDEDWNEFNDINK 17 1 0 Unmodified _DINLQDEDWNEFNDINK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1065.4832 2 1061.47162 2120.92869 59683.68 0.1155 0.0001226 0.57492 0.00061026 0.69042 0.00073286 1061.97424722189 1065.47891704558 120.47 0.46764 120.47 120.25 120.72 0 116 21 8 0 0 0 0.0012936 1 71482 56.122 55.901 1 0.85809 0.67731 0 5350300 2790900 2559300 4990 1854 1867 1919 7794 7794 DINLTIMLK 9 1 0 Oxidation (M) _DINLTIM(ox)LK_ DINLTIM(1)LK DINLTIM(40)LK 0 1 0 REV__A0A0U1RRM2 REV__A0A0U1RRM2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.8029 2 538.804642 1075.59473 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.732 1 97.732 97.232 98.232 0 0 0 0 0.044563 1 59651 40.002 15.847 1 + 4991 2166 1868 1920 7795 7795 2010 DINSVAIAPNDK 12 1 0 Unmodified _DINSVAIAPNDK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.8276 2 628.827692 1255.64083 76445.05 0.67719 0.00042584 -0.03737 -2.35E-05 0.63982 0.00040234 628.827520672535 632.834801700827 57.46 0.74296 57.46 57.091 57.833 -3.8147E-06 300 54 8 0 0 0 2.3613E-08 2 32350 120.04 115.59 1 0.86625 0.96954 0 64059000 35302000 28757000 4992 1698;436 1869 1921 7796;7797 7797 DINSVAIAPNDK 12 1 0 Unmodified _DINSVAIAPNDK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.8348 2 628.827692 1255.64083 76928.03 0.70103 0.00044083 -0.31603 -0.00019873 0.385 0.0002421 628.827324717609 632.834603800736 56.562 0.87035 56.562 56.284 57.155 -3.8147E-06 329 62 8 0 0 0 6.8459E-13 2 32526 133.42 122.26 1 0.86797 0.97053 0 86540000 41837000 44703000 4993 1698;436 1869 1921 7798;7799 7798 DINSVAIAPNDK 12 1 0 Unmodified _DINSVAIAPNDK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.8353 2 628.827692 1255.64083 75662.98 0.69299 0.00043577 0.10416 6.5501E-05 0.79716 0.00050127 628.827606721536 632.834866331742 65.968 1.0167 65.968 65.518 66.535 0 366 65 9 0 0 0 5.2017E-08 2 34227 113.69 105.47 1 1.2781 1.0174 0 19557000 8314100 11243000 4994 1698;436 1869 1921 7800;7801 7801 DINSVAIAPNDK 12 1 0 Unmodified _DINSVAIAPNDK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.8353 2 628.827692 1255.64083 76811.88 0.50254 0.00031601 0.20309 0.00012771 0.70563 0.00044372 628.827671853089 632.835000907432 66.542 0.87383 66.542 66.227 67.1 0 329 54 8 0 0 0 2.6103E-05 2 33718 100.55 83.784 1 1.2971 1.042 0 15757000 6801500 8955400 4995 1698;436 1869 1921 7802;7803 7803 DINTDFLLVVLR 12 0 1 Unmodified _DINTDFLLVVLR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.4354 2 709.406109 1416.79767 72738.07 0.8561 0.00060732 -0.18409 -0.0001306 0.672 0.00047672 709.905849581084 714.410480033526 134.96 0.19633 134.96 134.8 135 0 10 3 4 0 0 0 0.011691 1 82620 61.78 41.789 1 3.2577 2.8034 0 7136300 2212300 4924000 4996 1691 1870 1922 7804 7804 DINTFLGTPVQK 12 1 0 Unmodified _DINTFLGTPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.3556 2 666.861534 1331.70852 73710.45 0.98344 0.00065582 0.083915 5.596E-05 1.0674 0.00071178 666.861862473981 670.868730875488 93.353 0.93044 93.353 92.871 93.801 0 413 79 6 0 0 0 0.015418 1 56815 59.908 49.15 1 1.7221 2.039 0 442660000 161950000 280710000 4997 1569 1871 1923 7805 7805 DINTFLGTPVQK 12 1 0 Unmodified _DINTFLGTPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8689 2 666.861534 1331.70852 74170.53 0.65426 0.0004363 0.26321 0.00017552 0.91747 0.00061183 666.861849452171 670.868852651773 92.572 1.1179 92.572 92.074 93.192 0 429 94 7 0 0 0 4.6772E-06 1 57185 110.53 97.18 1 1.7343 2.0453 0 744210000 285750000 458470000 4998 1569 1871 1923 7806 7806 DINTFSMR 8 0 1 Oxidation (M) _DINTFSM(ox)R_ DINTFSM(1)R DINTFSM(62.55)R 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.232 2 500.231842 998.44913 84759.39 0.52757 0.00026391 0.1732 8.6642E-05 0.70077 0.00035055 500.231888027821 505.236048866528 37.388 0.65394 37.388 36.958 37.612 0 189 56 5 0 0 0 0.0070918 2 18832 62.546 43.059 1 0.9644 1.0695 0 66913000 29915000 36998000 4999 785 1872 1924 7807;7808 7807 617 DINTFSMR 8 0 1 Oxidation (M) _DINTFSM(ox)R_ DINTFSM(1)R DINTFSM(52.72)R 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.7339 2 500.231842 998.44913 84759.36 0.38252 0.00019135 -0.24688 -0.0001235 0.13564 6.7849E-05 500.231975995241 505.235532373437 37.795 0.81893 37.795 37.527 38.346 0 281 69 5 0 0 0 0.014171 2 19216 52.716 41.305 1 1.0001 1.0895 0 51269000 24347000 26922000 5000 785 1872 1924 7809;7810 7809 617 DINTFSMR 8 0 1 Oxidation (M) _DINTFSM(ox)R_ DINTFSM(1)R DINTFSM(81.21)R 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2316 2 500.231842 998.44913 84018.73 0.56616 0.00028321 0.21761 0.00010886 0.78377 0.00039207 500.231931230707 505.235986660931 36.448 0.92073 36.448 36.102 37.023 0 270 73 7 0 0 0 0.0037975 2 18734 81.215 54.077 1 0.9665 1.1124 0 74507000 35902000 38604000 5001 785 1872 1924 7811;7812 7812 617 DINTFSMR 8 0 1 Oxidation (M) _DINTFSM(ox)R_ DINTFSM(1)R DINTFSM(51.07)R 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.2319 2 500.231842 998.44913 86318.67 0.20875 0.00010442 0.47569 0.00023796 0.68445 0.00034238 500.231956830774 505.236166623844 41.928 0.69912 41.928 41.547 42.246 0 254 54 6 0 0 0 0.015392 1 19588 51.066 36.909 1 0.6799 0.58459 0 6718900 3932800 2786000 5002 785 1872 1924 7813 7813 617 DINTFSMR 8 0 1 Oxidation (M) _DINTFSM(ox)R_ DINTFSM(1)R DINTFSM(53.17)R 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.2363 2 500.231842 998.44913 86249.46 0.23478 0.00011745 0.11178 5.5916E-05 0.34656 0.00017336 500.231873261148 505.235958623096 42.512 0.71438 42.512 42.193 42.908 0 211 51 6 0 0 0 0.013837 2 19812 53.166 43.18 1 0.66493 0.57152 0 6558600 3731600 2827000 5003 785 1872 1924 7814;7815 7814 617 DINTFSMR 8 0 1 Oxidation (M) _DINTFSM(ox)R_ DINTFSM(1)R DINTFSM(54.55)R 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.2321 2 500.231842 998.44913 NaN NaN NaN 0.038183 1.91E-05 NaN NaN NaN NaN 71.478 0.36263 71.478 71.303 71.666 -7.6294E-06 0 0 0 0.011917 1 37667 54.549 44.135 1 NaN NaN 0 997070 997070 0 5004 785 1872 1924 7816 7816 617 DINTFSMR 8 0 1 Oxidation (M) _DINTFSM(ox)R_ DINTFSM(1)R DINTFSM(52.72)R 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.2321 2 500.231842 998.44913 84821.39 -0.13863 -6.9347E-05 0.62794 0.00031412 0.48931 0.00024477 500.232121445902 505.236233915051 42.054 0.79542 42.054 41.627 42.423 0 277 62 6 0 0 0 0.014171 1 19109 52.716 42.729 1 0.6852 0.56847 0 5117500 2907400 2210200 5005 785 1872 1924 7817 7817 617 DINTFSMR 8 0 1 Unmodified _DINTFSMR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.2388 2 492.234384 982.454216 87232.91 0.022354 1.1003E-05 0.47629 0.00023445 0.49864 0.00024545 492.23504269298 497.238497285678 71.436 0.45973 71.436 71.234 71.694 -7.6294E-06 135 32 6 0 0 0 0.034429 1 37677 49.423 13.929 1 1.1565 0.98715 0 5682400 2310400 3372000 5006 785 1872 1925 7818 7818 DINTFVGTPVEK 12 1 0 Unmodified _DINTFVGTPVEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.346 2 660.345717 1318.67688 74079.47 0.70594 0.00046616 -0.056523 -3.7325E-05 0.64941 0.00042884 660.345662080285 664.352883003757 81.77 1.4939 81.77 81.294 82.788 0 704 128 9 0 0 0 2.9606E-13 3 48567 135.99 113.25 1 1.6269 1.9289 0 483140000 177430000 305720000 5007 1569 1873 1926 7819;7820;7821 7820 DINTFVGTPVEK 12 1 0 Unmodified _DINTFVGTPVEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3528 2 660.345717 1318.67688 74542.1 0.8057 0.00053204 -0.25585 -0.00016895 0.54985 0.00036309 660.345716112869 664.352840596797 80.905 1.1853 80.905 80.428 81.613 0 583 97 9 0 0 0 1.2013E-12 3 49110 130.01 103.9 1 1.5591 1.8355 0 443000000 178410000 264590000 5008 1569 1873 1926 7822;7823;7824 7822 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8438 2 642.843342 1283.67213 75185.64 0.90023 0.00057871 -0.23107 -0.00014854 0.66916 0.00043017 642.842842264461 647.847960429141 86.969 0.57761 86.969 86.71 87.288 -7.6294E-06 156 44 6 0 0 0 0.0010242 2 52387 62.303 62.303 1 0.79593 0.81174 0 30594000 17041000 13554000 5009 649;648 1874 1927 7825;7826 7825 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8437 2 642.843342 1283.67213 74660.95 0.66937 0.0004303 -0.14246 -9.1578E-05 0.52691 0.00033872 642.843593409949 647.84724485859 87.873 2.4467 87.873 87.34 89.786 7.6294E-06 1477 209 13 0 0 0 3.6232E-13 7 53293 135.55 135.55 1 0.8089 0.96684 0 5272100000 2956500000 2315600000 5010 649;648 1874 1927 7827;7828;7829;7830;7831;7832;7833 7830 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8477 2 642.843342 1283.67213 75837.46 0.76538 0.00049202 -0.40715 -0.00026173 0.35823 0.00023029 642.843277639338 647.847593931843 89.975 0.7938 89.975 89.651 90.444 -7.6294E-06 164 63 4 0 0 0 0.0002099 5 54437 89.317 89.317 1 0.86183 0.89676 0 21953000 13498000 8455500 5011 649;648 1874 1927 7834;7835;7836;7837;7838 7835 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8481 2 642.843342 1283.67213 75837.45 1.086 0.00069815 -0.64361 -0.00041374 0.44242 0.00028441 642.843311487076 647.847844740831 90.567 0.40524 90.567 90.344 90.75 0 72 34 4 0 0 0 0.0003692 2 54729 72.006 72.006 1 0.61738 0.62486 0 17947000 8703100 9244200 5012 649;648 1874 1927 7839;7840 7840 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.845 2 642.843342 1283.67213 76007.97 1.2618 0.00081115 -0.21068 -0.00013543 1.0511 0.00067572 642.84364713534 647.847818266215 90.767 0.28087 90.767 90.593 90.874 0 49 23 3 0 0 0 0.0020652 1 54794 59.542 59.542 1 0.84955 0.87833 0 13872000 6784200 7087900 5013 649;648 1874 1927 7841 7841 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8429 2 642.843342 1283.67213 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.532 1 76.532 76.032 77.032 0 0 0 0 0.014355 1 45129 54.608 24.798 1 5014 649;648 1874 1927 7842 7842 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8483 2 642.843342 1283.67213 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.545 1 76.545 76.045 77.045 7.6294E-06 0 0 0 0.0010031 1 45139 73.233 39.971 1 5015 649;648 1874 1927 7843 7843 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8462 2 642.843342 1283.67213 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.045 1 93.045 92.545 93.545 0 0 0 0 0.011247 1 56401 56.359 43.322 1 5016 649;648 1874 1927 7844 7844 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.8477 2 642.843342 1283.67213 74827.52 0.50017 0.00032153 -0.16827 -0.00010817 0.33191 0.00021336 642.843756164828 647.847141331807 87.147 2.276 87.147 86.554 88.83 -7.6294E-06 836 192 13 0 0 0 7.557E-09 4 53415 123.63 123.63 1 0.77335 0.92595 0 4122900000 2318900000 1804000000 5017 649;648 1874 1927 7845;7846;7847;7848 7845 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.8488 2 642.843342 1283.67213 75643.78 0.51283 0.00032967 -0.10552 -6.7835E-05 0.4073 0.00026183 643.343880283604 647.847901535989 89.301 0.68687 89.301 89.08 89.767 0 114 54 4 0 0 0 0.0020652 1 55175 59.542 45.335 1 0.92253 1.0099 0 32914000 16521000 16394000 5018 649;648 1874 1927 7849 7849 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.847 2 642.843342 1283.67213 NaN NaN NaN -0.16065 -0.00010327 NaN NaN NaN NaN 87.272 1.8238 87.272 87.256 89.08 0 0 0 0 3.9648E-13 3 54410 121.5 90.008 1 NaN NaN 0 1227600000 0 1227600000 5019 649;648 1874 1927 7850;7851;7852 7851 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.847 2 642.843342 1283.67213 NaN NaN NaN -0.78949 -0.00050752 NaN NaN NaN NaN 93.399 0.096672 93.399 93.314 93.411 0 0 0 0 0.053461 1 57963 41.399 23.964 1 NaN NaN 0 2543300 0 2543300 5020 649;648 1874 1927 7853 7853 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8441 2 642.843342 1283.67213 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.439 1 87.439 86.939 87.939 0 0 0 0 7.2093E-11 1 53882 115.78 89.397 1 5021 649;648 1874 1927 7854 7854 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8437 2 642.843342 1283.67213 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.195 1 88.195 87.695 88.695 0 0 0 0 0.00052547 1 54402 79.201 58.3 1 5022 649;648 1874 1927 7855 7855 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.8484 2 642.843342 1283.67213 74594.32 0.72829 0.00046818 0.21309 0.00013698 0.94138 0.00060516 643.345464095434 647.847893587944 98.939 0.96715 98.939 98.449 99.416 0 169 58 5 0 0 0 0.014189 1 55793 43.77 39.471 1 1.41 1.1811 0 4004200 1313400 2690800 5023 649;648 1874 1927 7856 7856 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.8482 2 642.843342 1283.67213 74492.95 0.49249 0.00031659 -0.094417 -6.0695E-05 0.39807 0.0002559 642.843770936074 647.847358185453 100.06 5.9609 100.06 99.416 105.38 0 2037 407 11 0 0 0 0.00021532 12 57840 81.865 81.865 1 1.3625 1.1955 0 1203700000 501650000 702010000 5024 649;648 1874 1927 7857;7858;7859;7860;7861;7862;7863;7864;7865;7866;7867;7868 7863 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.8428 2 642.843342 1283.67213 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.808 1 98.808 98.308 99.308 0 0 0 0 0.054214 1 55773 42.001 21.672 1 5025 649;648 1874 1927 7869 7869 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.8434 2 642.843342 1283.67213 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.51 1 103.51 103.01 104.01 0 0 0 0 0.0074695 1 58853 60.434 39.532 1 5026 649;648 1874 1927 7870 7870 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.8491 2 642.843342 1283.67213 73159.29 0.63882 0.00041066 0.073478 4.7235E-05 0.7123 0.00045789 642.843274545837 647.847950165027 98.975 0.88854 98.975 98.495 99.384 0 219 51 6 0 0 0 0.018707 2 54884 40.589 36.123 1 1.4807 1.2316 0 5032100 2370200 2661800 5027 649;648 1874 1927 7871;7872 7871 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.8438 2 642.843342 1283.67213 74495.69 0.50342 0.00032362 -0.14299 -9.192E-05 0.36043 0.0002317 642.843814252941 647.847355518598 100.06 5.7345 100.06 99.497 105.23 0 2221 409 12 0 0 0 8.1414E-23 14 55951 157.66 157.66 1 1.3858 1.2122 0 1124500000 466200000 658320000 5028 649;648 1874 1927 7873;7874;7875;7876;7877;7878;7879;7880;7881;7882;7883;7884;7885;7886 7876 DIPSLVVAGQK 11 1 0 Unmodified _DIPSLVVAGQK_ 0 0 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.8265 2 563.826963 1125.63937 NaN NaN NaN -0.71427 -0.00040273 NaN NaN NaN NaN 83.888 0.4012 83.888 83.648 84.049 0 0 0 0 0.0040739 1 50205 66.621 43.881 1 NaN NaN 0 3001300 3001300 0 5029 1833 1875 1928 7887 7887 DIPSLVVAGQK 11 1 0 Unmodified _DIPSLVVAGQK_ 0 0 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.8339 2 563.826963 1125.63937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.908 1 83.908 83.408 84.408 0 0 0 0 0.0036929 1 50250 66.621 23.349 1 5030 1833 1875 1928 7888 7888 DIPVTIHNLEEYLR 14 0 1 Unmodified _DIPVTIHNLEEYLR_ 0 0 0 Q14669;H7C2Y1 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 861.46 2 856.454319 1710.89408 NaN NaN NaN 0.69899 0.00059865 NaN NaN NaN NaN 130.3 0.2684 130.3 130.13 130.4 0 0 0 0 0.0042853 1 78019 59.198 43.933 1 NaN NaN 0 1989300 0 1989300 5031 1736 1876 1929 7889 7889 DIQDSLTVSNEVQTAK 16 1 0 Unmodified _DIQDSLTVSNEVQTAK_ 0 0 0 Q53GE2;Q53GC7;A4D0V4;P47755;B4DE01 Q53GE2 Q53GE2 CAPZA2 F-actin-capping protein subunit alpha-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.4449 2 874.439063 1746.86357 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.333 1 76.333 75.833 76.833 0 0 0 0 3.5048E-05 1 46062 92.295 76.666 1 5032 659 1877 1930 7890 7890 DIQEESTFSSR 11 0 1 Unmodified _DIQEESTFSSR_ 0 0 0 E5KNY5;P42704;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.8004 2 649.796588 1297.57862 76211.53 0.76445 0.00049674 -0.31749 -0.0002063 0.44696 0.00029043 649.796359796772 654.800657955665 40.535 0.60588 40.535 40.308 40.914 0 187 48 6 0 0 0 4.4729E-10 2 21135 130.94 119.45 1 1.8761 1.9681 0 39394000 14398000 24996000 5033 1207 1878 1931 7891;7892 7891 DIQEESTFSSR 11 0 1 Unmodified _DIQEESTFSSR_ 0 0 0 E5KNY5;P42704;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8002 2 649.796588 1297.57862 76216.62 0.96924 0.00062981 -0.026976 -1.7529E-05 0.94226 0.00061228 649.796306953665 654.800832110705 39.564 0.72398 39.564 39.331 40.055 0 210 62 5 0 0 0 8.4595E-06 2 20901 109.42 97.929 1 1.8956 2.0736 0 34264000 14348000 19917000 5034 1207 1878 1931 7893;7894 7893 DIQEESTFSSR 11 0 1 Unmodified _DIQEESTFSSR_ 0 0 0 E5KNY5;P42704;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 654.8013 2 649.796588 1297.57862 75387.48 0.52394 0.00034046 -0.013115 -8.5218E-06 0.51083 0.00033194 649.796597672423 654.800644009508 46.44 0.60617 46.44 46.163 46.77 -3.8147E-06 155 37 6 0 0 0 0.00048456 2 22417 74.841 71.27 1 1.394 1.1804 0 2945900 1377000 1568900 5035 1207 1878 1931 7895;7896 7896 DIQEESTFSSR 11 0 1 Unmodified _DIQEESTFSSR_ 0 0 0 E5KNY5;P42704;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.8009 2 649.796588 1297.57862 76456.35 0.2688 0.00017466 0.079417 5.1605E-05 0.34822 0.00022627 649.796704685965 654.800830977507 46.823 0.75509 46.823 46.383 47.138 0 198 48 6 0 0 0 0.00048325 2 22113 74.944 69.979 1 1.2878 1.1165 0 1774300 697020 1077300 5036 1207 1878 1931 7897;7898 7898 DIQGPGNPQCFSLR 14 0 1 Unmodified _DIQGPGNPQCFSLR_ 0 0 0 Q8N516;Q4LE38;O95163 Q8N516 Q8N516 IKBKAP;IKBKAP variant protein Elongator complex protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.8851 2 794.880464 1587.74637 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.743 1 79.743 79.243 80.243 0 0 0 0 0.0029413 1 48497 58.172 39.86 1 5037 1419 1879 1932 7899 7899 DIQSCTVEVHFQK 13 1 0 Unmodified _DIQSCTVEVHFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.8926 2 795.882672 1589.75079 66627.09 0.88065 0.00070089 -0.54975 -0.00043753 0.3309 0.00026336 795.882552754132 799.889527802007 59.425 0.83458 59.425 58.984 59.819 0 315 64 8 0 0 0 9.4854E-14 2 33809 133.89 125.8 1 0.78323 0.85427 0 50108000 26809000 23299000 5038 2070;1136 1880 1933 7900;7901 7901 DIQSCTVEVHFQK 13 1 0 Unmodified _DIQSCTVEVHFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.9259 3 530.924207 1589.75079 81904.73 0.52938 0.00028106 -0.44985 -0.00023883 0.079535 4.2227E-05 531.259237182197 533.595859024916 59.425 1.1798 59.425 58.661 59.841 0 367 93 6 0 0 0 4.3683E-05 1 33739 84.365 84.365 1 0.72186 0.80152 0 59650000 35482000 24169000 5039 2070;1136 1880 1933 7902 7902 DIQSCTVEVHFQK 13 1 0 Unmodified _DIQSCTVEVHFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.3929 2 795.882672 1589.75079 67986.59 0.81661 0.00064992 -0.61501 -0.00048948 0.20159 0.00016044 795.88232260406 799.889510364269 58.264 0.71232 58.264 57.875 58.588 3.8147E-06 178 55 6 0 0 0 1.435E-18 4 33892 138.22 138.22 1 0.94408 1.0253 0 39303000 21215000 18088000 5040 2070;1136 1880 1933 7903;7904;7905;7906 7906 DIQSCTVEVHFQK 13 1 0 Unmodified _DIQSCTVEVHFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.2586 3 530.924207 1589.75079 82994.47 0.60624 0.00032187 0.24505 0.0001301 0.85128 0.00045197 531.259233429873 533.59614696222 58.338 0.87958 58.338 57.919 58.799 0 226 73 5 0 0 0 1.1391E-05 1 33784 86.803 86.803 1 0.72772 0.78529 0 38191000 17667000 20524000 5041 2070;1136 1880 1933 7907 7907 DIQSCTVEVHFQK 13 1 0 Unmodified _DIQSCTVEVHFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.8834 2 795.882672 1589.75079 67517.83 0.50134 0.00039901 -0.092611 -7.3708E-05 0.40873 0.0003253 795.882770984041 799.889913755415 69.026 0.92967 69.026 68.52 69.45 -7.6294E-06 431 65 10 0 0 0 0.0054707 3 35928 47.288 47.288 1 1.8177 1.4774 0 28869000 10726000 18142000 5042 2070;1136 1880 1933 7908;7909;7910 7909 DIQSCTVEVHFQK 13 1 0 Unmodified _DIQSCTVEVHFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.93 3 530.924207 1589.75079 81128.93 0.30426 0.00016154 -0.13498 -7.1664E-05 0.16928 8.9875E-05 530.924361962013 533.595653996761 68.966 0.9084 68.966 68.509 69.417 0 406 64 9 0 0 0 0.00055366 2 35989 45.115 45.115 1 1.6458 1.3206 0 21271000 7829500 13441000 5043 2070;1136 1880 1933 7911;7912 7912 DIQSCTVEVHFQK 13 1 0 Unmodified _DIQSCTVEVHFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.8909 2 795.882672 1589.75079 67460.42 0.6037 0.00048047 -0.22267 -0.00017722 0.38103 0.00030325 795.882512292419 799.88977026249 69.532 0.96502 69.532 68.998 69.963 0 421 66 9 0 0 0 0.003053 2 35462 51.252 51.252 1 1.7584 1.425 0 24336000 8369900 15966000 5044 2070;1136 1880 1933 7913;7914 7913 DIQSCTVEVHFQK 13 1 0 Unmodified _DIQSCTVEVHFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.924 3 530.924207 1589.75079 81553.88 0.43655 0.00023177 -0.3418 -0.00018147 0.09475 5.0305E-05 530.924167411646 533.595536920899 69.572 0.89362 69.572 69.055 69.948 0 404 61 9 0 0 0 0.0099432 2 35563 31.526 31.526 1 1.6235 1.3042 0 17326000 5767100 11559000 5045 2070;1136 1880 1933 7915;7916 7916 DISEASVFDAYVLPK 15 1 0 Unmodified _DISEASVFDAYVLPK_ 0 0 0 A0A024RB14;P62854;Q75MH1 A0A024RB14 A0A024RB14 RPS26 40S ribosomal protein S26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.9302 2 827.422153 1652.82975 66140.45 0.83755 0.00069301 -0.34596 -0.00028626 0.49159 0.00040675 827.42255937916 831.428777980526 120.93 1.7672 120.93 120.6 122.37 0 711 120 12 0 0 0 4.5682E-11 4 77853 124.12 124.12 1 0.70466 0.85414 0 2013900000 1172700000 841280000 5046 319 1881 1934 7917;7918;7919;7920 7917 DISEASVFDAYVLPK 15 1 0 Unmodified _DISEASVFDAYVLPK_ 0 0 0 A0A024RB14;P62854;Q75MH1 A0A024RB14 A0A024RB14 RPS26 40S ribosomal protein S26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.423 2 827.422153 1652.82975 68125.24 1.2175 0.0010074 0.72093 0.00059651 1.9385 0.0016039 827.42245159588 831.429414454765 127.09 0.46051 127.09 126.88 127.34 0 71 24 5 0 0 0 0.01556 1 82656 32.946 26.975 1 0.71652 0.73305 0 4344400 2519300 1825100 5047 319 1881 1934 7921 7921 DISEASVFDAYVLPK 15 1 0 Unmodified _DISEASVFDAYVLPK_ 0 0 0 A0A024RB14;P62854;Q75MH1 A0A024RB14 A0A024RB14 RPS26 40S ribosomal protein S26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.4222 2 827.422153 1652.82975 66185.37 1.109 0.00091765 -0.34546 -0.00028584 0.76359 0.00063181 827.422590325606 831.428782661205 120.56 1.7807 120.56 120.15 121.93 -7.6294E-06 716 123 12 0 0 0 6.1097E-99 3 79465 229 220.3 1 0.70985 0.83983 0 1941900000 1135000000 806940000 5048 319 1881 1934 7922;7923;7924 7923 DISEASVFDAYVLPK 15 1 0 Unmodified _DISEASVFDAYVLPK_ 0 0 0 A0A024RB14;P62854;Q75MH1 A0A024RB14 A0A024RB14 RPS26 40S ribosomal protein S26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.4308 2 827.422153 1652.82975 71223.69 1.0763 0.00089059 -0.85639 -0.00070859 0.21996 0.000182 827.420324006335 831.931177152217 126.82 0.55533 126.82 126.57 127.12 0 92 33 4 0 0 0 0.0002222 1 84565 67.153 67.153 1 0.65153 0.67864 0 4586200 2761000 1825200 5049 319 1881 1934 7925 7925 DISEASVFDAYVLPK 15 1 0 Unmodified _DISEASVFDAYVLPK_ 0 0 0 A0A024RB14;P62854;Q75MH1 A0A024RB14 A0A024RB14 RPS26 40S ribosomal protein S26 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.4299 2 827.422153 1652.82975 66176.71 1.1841 0.00097972 -0.9808 -0.00081153 0.20326 0.00016819 827.423085460352 831.42867443359 133.07 1.69 133.07 132.61 134.3 0 571 75 13 0 0 0 2.5124E-10 5 80811 118.77 118.77 1 1.4426 1.3231 0 1462900000 608780000 854070000 5050 319 1881 1934 7926;7927;7928;7929;7930 7926 DISEASVFDAYVLPK 15 1 0 Unmodified _DISEASVFDAYVLPK_ 0 0 0 A0A024RB14;P62854;Q75MH1 A0A024RB14 A0A024RB14 RPS26 40S ribosomal protein S26 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.4301 2 827.422153 1652.82975 66501.74 1.2678 0.001049 -0.75457 -0.00062435 0.51319 0.00042462 827.423372423573 831.428998871653 132.85 1.9446 132.85 132.5 134.44 0 640 87 13 0 0 0 3.9051E-10 4 80029 115.14 115.14 1 1.4018 1.2459 0 1327600000 547330000 780270000 5051 319 1881 1934 7931;7932;7933;7934 7932 DISEVIALGVPNPR 14 0 1 Unmodified _DISEVIALGVPNPR_ 0 0 0 B7Z9X2;B4DY36;A0A024R6E3;Q6I9S2;Q13573;G3V4X8;G3V3A4;B4DEG7;Q9ULA6 B7Z9X2 B7Z9X2 SNW1 SNW domain-containing protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.4401 2 740.411923 1478.80929 72550.13 0.96513 0.0007146 0.45856 0.00033952 1.4237 0.0010541 740.411816364286 745.416452461295 116.48 0.43913 116.48 116.24 116.68 0 65 30 4 0 0 0 7.9997E-06 1 74427 83.869 74.93 1 1.3237 1.3464 0 7271900 3559800 3712100 5052 203 1882 1935 7935 7935 DISLSDYK 8 1 0 Unmodified _DISLSDYK_ 0 0 0 Q06830;A0A0A0MSI0 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.7416 2 470.73474 939.454927 88997.25 0.34621 0.00016297 -0.038845 -1.8286E-05 0.30736 0.00014469 470.734661516019 474.741682938442 59.369 0.85228 59.369 58.952 59.804 0 255 66 6 0 0 0 0.013689 1 33702 64.734 5.915 1 3.0816 3.4701 0 73831000 16117000 57714000 5053 1690 1883 1936 7936 7936 DISLSDYK 8 1 0 Unmodified _DISLSDYK_ 0 0 0 Q06830;A0A0A0MSI0 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.7426 2 470.73474 939.454927 87255.93 0.44383 0.00020893 -0.034733 -1.635E-05 0.4091 0.00019258 470.734573998275 474.74170984791 58.469 0.84831 58.469 58.033 58.881 0 236 71 5 0 0 0 0.0087497 2 33998 77.282 16.523 1 3.1572 3.5574 0 59711000 14582000 45128000 5054 1690 1883 1936 7937;7938 7938 DISLSDYK 8 1 0 Unmodified _DISLSDYK_ 0 0 0 Q06830;A0A0A0MSI0 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 474.7418 2 470.73474 939.454927 89059.36 0.16351 7.6968E-05 0.044862 2.1118E-05 0.20837 9.8086E-05 470.734715805462 474.741724711732 68.494 0.84338 68.494 68.083 68.927 7.6294E-06 225 62 5 0 0 0 0.052503 1 35762 42.835 2.632 1 2.7075 2.1356 0 5457900 1641800 3816200 5055 1690 1883 1936 7939 7939 DISNCWAPK 9 1 0 Unmodified _DISNCWAPK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.7534 2 545.752941 1089.49133 82581.05 0.76865 0.0004195 0.08472 4.6236E-05 0.85337 0.00046573 545.752796141794 549.760111272783 55.873 0.61531 55.873 55.548 56.164 3.8147E-06 141 44 4 0 0 0 0.0056953 2 31529 66.073 55.363 1 0.78561 0.81692 0 14884000 9553400 5330700 5056 1752 1884 1937 7940;7941 7941 DISNCWAPK 9 1 0 Unmodified _DISNCWAPK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.7604 2 545.752941 1089.49133 82805 0.43134 0.00023541 0.0029814 1.6271E-06 0.43432 0.00023703 545.752868811989 549.760088369836 54.953 0.64867 54.953 54.684 55.333 0 170 51 5 0 0 0 0.0011746 2 31408 88.942 72.74 1 0.80318 0.82082 0 17325000 9997500 7327300 5057 1752 1884 1937 7942;7943 7942 DISNCWAPK 9 1 0 Unmodified _DISNCWAPK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.7601 2 545.752941 1089.49133 81464.64 0.33651 0.00018365 -0.04207 -2.296E-05 0.29444 0.00016069 545.752797885225 549.759924053161 64.012 0.93055 64.012 63.576 64.507 0 314 76 5 0 0 0 0.027387 2 32938 47.082 41.6 1 1.1561 0.9148 0 5032900 2101400 2931400 5058 1752 1884 1937 7944;7945 7944 DISNCWAPK 9 1 0 Unmodified _DISNCWAPK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.7601 2 545.752941 1089.49133 81019.02 0.28155 0.00015366 -0.060457 -3.2995E-05 0.22109 0.00012066 545.752859049928 549.759942857181 64.575 0.94097 64.575 64.18 65.121 0 324 79 6 0 0 0 0.035569 1 32517 43.808 39.392 1 1.1496 0.93018 0 4358200 1836100 2522100 5059 1752 1884 1937 7946 7946 DISNTLIMLADK 12 1 0 Oxidation (M) _DISNTLIM(ox)LADK_ DISNTLIM(1)LADK DISNTLIM(49.35)LADK 0 1 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;Q53SC0;E9PF88 E7EQY4 E7EQY4 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3548 2 675.352685 1348.69082 NaN NaN NaN 0.41588 0.00028087 NaN NaN NaN NaN 112.57 0.3765 112.57 112.36 112.74 0 0 0 0 0.0078225 1 72810 49.35 19.541 1 NaN NaN 0 3144900 3144900 0 5060 1221 1885 1938 7947 7947 930 DISQLQIDLTGALGK 15 1 0 Unmodified _DISQLQIDLTGALGK_ 0 0 0 B4DRC7;Q6P3X3 B4DRC7 B4DRC7 TTC27 Tetratricopeptide repeat protein 27 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.9453 2 786.435595 1570.85664 NaN NaN NaN 0.061043 4.8006E-05 NaN NaN NaN NaN 121.82 0.34755 121.82 121.63 121.98 0 0 0 0 0.002567 1 80726 62.694 31.508 1 NaN NaN 0 4599200 0 4599200 5061 1026 1886 1939 7948 7948 DISSSLNSLADSNAR 15 0 1 Unmodified _DISSSLNSLADSNAR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.3837 2 775.376266 1548.73798 68902.86 1.035 0.00080248 -0.26286 -0.00020382 0.77209 0.00059866 775.877561101821 780.380105770107 84.385 0.79688 84.385 84.105 84.902 -7.6294E-06 360 62 7 0 0 0 2.1011E-31 2 50425 162.26 162.26 1 0.76282 0.86849 0 115490000 62246000 53247000 5062 168 1887 1940 7949;7950 7949 DISSSLNSLADSNAR 15 0 1 Unmodified _DISSSLNSLADSNAR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.3798 2 775.376266 1548.73798 68766.57 0.93982 0.00072872 0.058298 4.5203E-05 0.99812 0.00077392 775.376406440575 780.38026870303 83.675 0.88655 83.675 83.311 84.198 0 415 71 9 0 0 0 1.3635E-38 2 51135 169.65 169.65 1 0.77315 0.88113 0 101960000 54378000 47579000 5063 168 1887 1940 7951;7952 7952 DISSSLNSLADSNAR 15 0 1 Unmodified _DISSSLNSLADSNAR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.3768 2 775.376266 1548.73798 68776.74 0.96977 0.00075193 -0.29372 -0.00022774 0.67605 0.00052419 775.376096825477 780.380066161018 96.446 1.0851 96.446 95.975 97.06 0 259 63 6 0 0 0 1.6136E-30 2 54052 155.99 155.99 1 1.6859 1.4228 0 29169000 12023000 17146000 5064 168 1887 1940 7953;7954 7954 DISSSLNSLADSNAR 15 0 1 Unmodified _DISSSLNSLADSNAR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.3816 2 775.376266 1548.73798 68172.72 0.50563 0.00039205 -0.43285 -0.00033562 0.072779 5.6431E-05 775.375998888115 780.380090884589 96.461 0.88923 96.461 96.13 97.02 7.6294E-06 290 47 9 0 0 0 8.7185E-06 3 53538 93.959 87.27 1 1.7499 1.5264 0 29659000 10334000 19326000 5065 168 1887 1940 7955;7956;7957 7957 DISSTLIALADK 12 1 0 Unmodified _DISSTLIALADK_ 0 0 0 E7ESY4;Q13330;H7C3F3 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.8484 2 623.848093 1245.68163 77862.91 1.0596 0.000661 -0.23398 -0.00014597 0.82557 0.00051503 623.847886751519 627.855059151563 119.1 0.6356 119.1 118.83 119.47 0 176 40 6 0 0 0 0.0001401 3 76483 93.442 67.916 1 0.90044 0.91987 0 17798000 10207000 7592000 5066 1223 1888 1941 7958;7959;7960 7958 DISSTLIALADK 12 1 0 Unmodified _DISSTLIALADK_ 0 0 0 E7ESY4;Q13330;H7C3F3 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.8485 2 623.848093 1245.68163 77488.45 0.65491 0.00040856 -0.16602 -0.00010357 0.48889 0.00030499 623.848076176655 627.85495227937 118.67 0.64893 118.67 118.43 119.07 0 190 40 6 0 0 0 0.00018715 2 78021 90.685 71.414 1 0.83457 0.85524 0 31882000 17703000 14179000 5067 1223 1888 1941 7961;7962 7961 DISSTLIALADK 12 1 0 Unmodified _DISSTLIALADK_ 0 0 0 E7ESY4;Q13330;H7C3F3 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.8558 2 623.848093 1245.68163 79087.63 0.60378 0.00037667 -0.22388 -0.00013966 0.37991 0.000237 623.848123662891 627.854991547962 131.41 0.65692 131.41 131.11 131.77 0 113 30 6 0 0 0 0.0013581 1 79657 61.344 42.073 1 1.9225 1.5189 0 5219800 1672000 3547800 5068 1223 1888 1941 7963 7963 DISTILDEER 10 0 1 Unmodified _DISTILDEER_ 0 0 0 Q96T23;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.7983 2 595.7986 1189.58265 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.242 1 89.242 88.742 89.742 0 0 0 0 0.023936 1 53870 52.579 31.279 1 5069 1991 1889 1942 7964 7964 DISTILDEERK 11 1 1 Unmodified _DISTILDEERK_ 0 0 1 Q96T23;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8589 2 659.846081 1317.67761 75524.66 0.80651 0.00053217 0.18699 0.00012339 0.99351 0.00065556 659.845914893131 668.858385039522 70.763 0.74362 70.763 70.424 71.168 7.6294E-06 208 59 6 0 0 0 2.8003E-05 2 41213 106.2 106.2 1 0.417 0.49281 0 37980000 25502000 12478000 5070 1991 1890 1943 7965;7966 7966 DISTILDEERK 11 1 1 Unmodified _DISTILDEERK_ 0 0 1 Q96T23;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.8463 2 659.846081 1317.67761 75698.05 0.41734 0.00027538 0.1005 6.6316E-05 0.51784 0.00034169 659.846019653399 668.85704542124 69.441 0.59306 69.441 69.192 69.785 0 211 49 7 0 0 0 3.9715E-12 2 41371 140.16 140.16 1 0.38398 0.45018 0 56580000 38747000 17833000 5071 1991 1890 1943 7967;7968 7968 DISTILDEERK 11 1 1 Unmodified _DISTILDEERK_ 0 0 1 Q96T23;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.8576 2 659.846081 1317.67761 74784.84 0.50467 0.00033301 -0.14006 -9.2417E-05 0.36461 0.00024059 659.845927141939 668.857098651561 80.757 0.45843 80.757 80.513 80.972 0 172 30 8 0 0 0 0.0026073 2 43700 66.595 66.595 1 0.95014 0.82412 0 16879000 9131700 7747300 5072 1991 1890 1943 7969;7970 7970 DISTILDEERK 11 1 1 Unmodified _DISTILDEERK_ 0 0 1 Q96T23;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.8569 2 659.846081 1317.67761 75587.95 0.6653 0.000439 -0.23848 -0.00015736 0.42682 0.00028164 659.845815153175 668.85703489014 80.926 0.49103 80.926 80.704 81.195 7.6294E-06 156 34 7 0 0 0 0.0023601 2 42933 67.726 67.726 1 0.84568 0.71509 0 10035000 5033500 5001400 5073 1991 1890 1943 7971;7972 7971 DISTITGHR 9 0 1 Unmodified _DISTITGHR_ 0 0 0 Q96T23;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2644 2 500.26453 998.514508 86473.36 0.24201 0.00012107 0.13212 6.6097E-05 0.37414 0.00018717 500.264582760228 505.268678319567 28.151 0.31413 28.151 27.947 28.261 0 62 15 6 0 0 0 6.477E-06 1 13324 131.03 90.829 1 0.4716 0.54492 0 56012000 38471000 17541000 5074 1991 1891 1944 7973 7973 DISTITGHR 9 0 1 Unmodified _DISTITGHR_ 0 0 0 Q96T23;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.2688 2 500.26453 998.514508 85679.68 0.083331 4.1687E-05 0.28445 0.0001423 0.36778 0.00018399 500.264459179745 505.26880614278 32.149 0.65201 32.149 31.942 32.594 0 88 32 5 0 0 0 0.017976 2 13781 52.482 38.325 1 0.90061 0.76582 0 5329700 2790400 2539300 5075 1991 1891 1944 7974;7975 7975 DISTTLNADEAVAR 14 0 1 Unmodified _DISTTLNADEAVAR_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;A0A0A0MSM0;B4DY72;B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2 A0A024RDQ0;B3KNM0 A0A024RDQ0 HSPH1;HSPA4L Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.3751 2 738.370452 1474.72635 70800.52 0.7805 0.0005763 0.021743 1.6055E-05 0.80225 0.00059236 738.370009432514 743.374760632613 76.164 0.78218 76.164 75.709 76.491 0 231 64 6 0 0 0 1.2465E-09 1 44726 120.77 93.672 1 1.8616 1.9265 0 37378000 13844000 23533000 5076 390;624 1892 1945 7976 7976 DISTTLNADEAVAR 14 0 1 Unmodified _DISTTLNADEAVAR_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;A0A0A0MSM0;B4DY72;B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2 A0A024RDQ0;B3KNM0 A0A024RDQ0 HSPH1;HSPA4L Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.3757 2 738.370452 1474.72635 70563.72 0.61594 0.00045479 0.011883 8.7741E-06 0.62783 0.00046357 738.370470326947 743.374670164361 75.368 0.70158 75.368 75.004 75.705 0 283 61 6 0 0 0 1.2465E-09 2 45284 120.77 93.672 1 1.892 2.1822 0 54949000 17769000 37180000 5077 390;624 1892 1945 7977;7978 7977 DISTTLNADEAVAR 14 0 1 Unmodified _DISTTLNADEAVAR_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;A0A0A0MSM0;B4DY72;B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2 A0A024RDQ0;B3KNM0 A0A024RDQ0 HSPH1;HSPA4L Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.3712 2 738.370452 1474.72635 NaN NaN NaN -0.2635 -0.00019456 NaN NaN NaN NaN 87.243 0.65318 87.243 86.888 87.541 0 0 0 0 0.0027578 1 47071 64.55 39.165 1 NaN NaN 0 2391300 2391300 0 5078 390;624 1892 1945 7979 7979 DITAEFLVK 9 1 0 Unmodified _DITAEFLVK_ 0 0 0 A8K2R3;O60341 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.2899 2 518.289682 1034.56481 89327 0.84596 0.00043845 0.72521 0.00037587 1.5712 0.00081432 518.289692667615 522.297001563051 102.08 0.57869 102.08 101.92 102.49 0 127 47 5 0 0 0 0.038591 1 62751 42.599 18.444 1 0.99204 1.0021 0 10096000 5078000 5018200 5079 711 1893 1946 7980 7980 DITLFHAMDTLQR 13 0 1 Oxidation (M) _DITLFHAM(ox)DTLQR_ DITLFHAM(1)DTLQR DITLFHAM(79.66)DTLQR 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.3972 2 788.89304 1575.77153 NaN NaN NaN -0.71469 -0.00056381 NaN NaN NaN NaN 84.684 0.26572 84.684 84.549 84.814 0 0 0 0 0.00024154 2 50695 79.659 54.273 1 NaN NaN 0 6131500 0 6131500 5080 168 1894 1947 7981;7982 7981 142 DITLFHAMDTLQR 13 0 1 Oxidation (M) _DITLFHAM(ox)DTLQR_ DITLFHAM(1)DTLQR DITLFHAM(75.42)DTLQR 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.4002 2 788.89304 1575.77153 NaN NaN NaN 0.82595 0.00065158 NaN NaN NaN NaN 82.932 0.42298 82.932 82.75 83.173 0 0 0 0 0.00045983 2 50916 75.416 56.67 1 NaN NaN 0 9573000 0 9573000 5081 168 1894 1947 7983;7984 7984 142 DITLFHAMDTLQR 13 0 1 Oxidation (M) _DITLFHAM(ox)DTLQR_ DITLFHAM(1)DTLQR DITLFHAM(74.84)DTLQR 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.8973 2 788.89304 1575.77153 NaN NaN NaN -0.79885 -0.00063021 NaN NaN NaN NaN 83.45 0.48363 83.45 83.185 83.669 0 0 0 0 0.00048939 1 51254 74.841 56.573 1 NaN NaN 0 5686900 0 5686900 5082 168 1894 1947 7985 7985 142 DITLFHAMDTLQR 13 0 1 Unmodified _DITLFHAMDTLQR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 785.9005 2 780.895583 1559.77661 69898.73 0.52964 0.00041359 0.43836 0.00034231 0.968 0.00075591 780.896599440901 785.899914681085 117.2 0.39222 117.2 117 117.39 0 78 16 6 0 0 0 0.00026967 1 68948 65.395 65.395 1 1.5182 1.3004 0 6062300 2491500 3570700 5083 168 1894 1948 7986 7986 DITLFHAMDTLQR 13 0 1 Unmodified _DITLFHAMDTLQR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.603 3 520.932814 1559.77661 86521.27 0.16014 8.342E-05 -0.1308 -6.814E-05 0.029333 1.5281E-05 521.26713908855 524.268715700649 117.18 0.40677 117.18 117 117.41 0 62 17 5 0 0 0 0.021473 1 68955 24.964 19.787 1 1.6701 1.4501 0 2339400 849620 1489700 5084 168 1894 1948 7987 7987 DITLFHAMDTLQR 13 0 1 Unmodified _DITLFHAMDTLQR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 524.2689 3 520.932814 1559.77661 85221.09 0.38276 0.00019939 0.1911 9.9552E-05 0.57386 0.00029894 521.267242192966 524.603332283874 117.05 0.35143 117.05 116.86 117.21 -7.6294E-06 60 15 6 0 0 0 0.014841 2 67923 29.638 24.559 1 2.1621 1.9176 0 1921500 523090 1398500 5085 168 1894 1948 7988;7989 7988 DITLFHAMDTLQR 13 0 1 Unmodified _DITLFHAMDTLQR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.8964 2 780.895583 1559.77661 69889.23 0.67271 0.00052531 0.46442 0.00036266 1.1371 0.00088798 781.397748712623 785.900050038365 116.99 0.4426 116.99 116.76 117.21 -7.6294E-06 87 18 7 0 0 0 0.00012863 2 67952 79.201 79.201 1 1.4593 1.2107 0 5271600 2028300 3243300 5086 168 1894 1948 7990;7991 7991 DITNVSLYPVVK 12 1 0 Unmodified _DITNVSLYPVVK_ 0 0 0 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.3789 2 674.37956 1346.74457 74690.97 0.75227 0.00050732 -0.22306 -0.00015042 0.52922 0.00035689 674.379955758002 678.386487393551 105.94 0.63127 105.94 105.59 106.22 0 166 47 5 0 0 0 4.62E-05 1 65562 98.943 70.93 1 0.86614 0.89409 0 17269000 9780100 7488900 5087 1075 1895 1949 7992 7992 DITNVSLYPVVK 12 1 0 Unmodified _DITNVSLYPVVK_ 0 0 0 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.382 2 674.37956 1346.74457 75867.38 0.76722 0.0005174 0.010495 7.0774E-06 0.77772 0.00052448 674.379946076173 678.386538599726 105.31 0.66784 105.31 104.99 105.66 0 181 48 6 0 0 0 4.62E-05 1 66762 98.943 55.43 1 0.95851 1.017 0 36005000 17847000 18158000 5088 1075 1895 1949 7993 7993 DITNVSLYPVVK 12 1 0 Unmodified _DITNVSLYPVVK_ 0 0 0 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.3799 2 674.37956 1346.74457 74693.28 0.48258 0.00032544 -0.12053 -8.128E-05 0.36205 0.00024416 674.379478647421 678.386631948394 117.2 0.59204 117.2 116.92 117.51 0 130 26 8 0 0 0 1.4464E-05 1 68941 105.98 66.353 1 1.3553 1.0697 0 10740000 4945300 5794900 5089 1075 1895 1949 7994 7994 DITNVSLYPVVK 12 1 0 Unmodified _DITNVSLYPVVK_ 0 0 0 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.3792 2 674.37956 1346.74457 74977.32 0.64132 0.00043249 0.10036 6.7681E-05 0.74168 0.00050017 674.379660828406 678.386704498162 117.08 0.63191 117.08 116.76 117.4 0 139 28 8 0 0 0 0.0039322 2 67877 54.784 38.777 1 1.2695 1.0493 0 11776000 5298400 6477900 5090 1075 1895 1949 7995;7996 7995 DITSSIHFEAYR 12 0 1 Unmodified _DITSSIHFEAYR_ 0 0 0 A0A0S2Z5W9;A0A024R8Q0;A0A0S2Z5A5;A0A024R8V0;Q9UHD8;A2VCQ5 A0A0S2Z5W9 A0A0S2Z5W9 SEPT9;MAFK Septin-9 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.856 2 719.851698 1437.68884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.495 1 80.495 79.995 80.995 0 0 0 0 0.019112 1 49056 51.927 27.072 1 5091 254 1896 1950 7997 7997 DITSSIHFEAYR 12 0 1 Unmodified _DITSSIHFEAYR_ 0 0 0 A0A0S2Z5W9;A0A024R8Q0;A0A0S2Z5A5;A0A024R8V0;Q9UHD8;A2VCQ5 A0A0S2Z5W9 A0A0S2Z5W9 SEPT9;MAFK Septin-9 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.856 2 719.851698 1437.68884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.508 1 80.508 80.008 81.008 0 0 0 0 0.034419 1 49065 44.425 24.818 1 5092 254 1896 1950 7998 7998 DIVALMVR 8 0 1 Oxidation (M) _DIVALM(ox)VR_ DIVALM(1)VR DIVALM(49.36)VR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7652 2 466.76532 931.516088 87558.64 0.28598 0.00013348 0.80616 0.00037629 1.0921 0.00050977 466.765492587043 471.769753953578 78.099 1.2411 78.099 77.634 78.875 0 289 103 5 0 0 0 0.016766 1 45957 49.358 32.395 1 1.2578 1.459 0 173270000 87340000 85934000 5093 1471 1897 1951 7999 7999 1192 DIVALMVR 8 0 1 Oxidation (M) _DIVALM(ox)VR_ DIVALM(1)VR DIVALM(41.89)VR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2675 2 466.76532 931.516088 88748.25 0.12982 6.0598E-05 0.82334 0.00038431 0.95317 0.0004449 466.765467819826 471.769835949889 77.05 1.173 77.05 76.556 77.729 0 405 93 7 0 0 0 0.02669 1 46395 41.892 27.116 1 1.5249 1.7517 0 193900000 74088000 119810000 5094 1471 1897 1951 8000 8000 1192 DIVALMVR 8 0 1 Oxidation (M) _DIVALM(ox)VR_ DIVALM(1)VR DIVALM(54.2)VR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7659 2 466.76532 931.516088 92829.32 0.38061 0.00017766 -0.15882 -7.413E-05 0.22179 0.00010352 466.765217958925 471.769296388601 100.48 0.78922 100.48 100.11 100.9 -7.6294E-06 146 64 4 0 0 0 0.013069 1 62994 54.205 37.658 1 0.507 0.4977 0 14093000 9750500 4342300 5095 1471 1897 1951 8001 8001 1192 DIVALMVR 8 0 1 Oxidation (M) _DIVALM(ox)VR_ DIVALM(1)VR DIVALM(53.35)VR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.7693 2 466.76532 931.516088 87963.6 0.46315 0.00021618 0.018948 8.8443E-06 0.4821 0.00022503 466.765171061176 471.769402313414 88.39 1.2225 88.39 88.008 89.231 0 314 77 5 0 0 0 0.0137 1 48717 53.351 35.316 1 0.74744 0.62007 0 20654000 11491000 9163800 5096 1471 1897 1951 8002 8002 1192 DIVALMVR 8 0 1 Oxidation (M) _DIVALM(ox)VR_ DIVALM(1)VR DIVALM(58.6)VR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.7696 2 466.76532 931.516088 88969.31 0.36429 0.00017004 -0.29294 -0.00013673 0.071352 3.3305E-05 466.765229060088 471.769323512058 113.26 1.2495 113.26 112.83 114.08 -7.6294E-06 244 60 7 0 0 0 0.0098117 2 64940 58.604 40.569 1 1.4132 1.1447 0 11802000 5162300 6639400 5097 1471 1897 1951 8003;8004 8003 1192 DIVALMVR 8 0 1 Unmodified _DIVALMVR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.7718 2 458.767863 915.521173 89630.74 0.42038 0.00019286 -0.28209 -0.00012942 0.13828 6.3439E-05 458.767678806334 463.771782185937 101.24 1.297 101.24 100.57 101.87 7.6294E-06 300 96 5 0 0 0 0.011011 3 62003 70.912 54.759 1 0.59272 0.60202 0 27752000 16236000 11516000 5098 1471 1897 1952 8005;8006;8007 8006 DIVALMVR 8 0 1 Unmodified _DIVALMVR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.7679 2 458.767863 915.521173 89858.69 0.34201 0.0001569 -0.038668 -1.774E-05 0.30334 0.00013916 458.767744511113 463.77183508174 100.49 1.113 100.49 99.847 100.96 0 333 89 6 0 0 0 0.0090389 2 63218 76.035 60.595 1 0.60056 0.69929 0 60815000 37068000 23746000 5099 1471 1897 1952 8008;8009 8009 DIVALMVR 8 0 1 Unmodified _DIVALMVR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 463.7723 2 458.767863 915.521173 88809.8 0.69951 0.00032091 -0.11245 -5.159E-05 0.58705 0.00026932 458.767750220892 463.771828507686 113.36 1.3718 113.36 112.98 114.35 0 264 64 6 0 0 0 0.042651 1 65818 46.426 36.347 1 1.4001 1.1902 0 34339000 14526000 19813000 5100 1471 1897 1952 8010 8010 DIVEELSALK 10 1 0 Unmodified _DIVEELSALK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.8112 2 558.810979 1115.6074 81409.52 0.99782 0.00055759 -0.0039422 -2.2029E-06 0.99388 0.00055539 558.810906132621 562.818049401344 111.76 0.60908 111.76 111.43 112.04 0 210 44 6 0 0 0 9.7206E-05 2 70294 97.431 97.431 1 1.9649 2.2161 0 77411000 25303000 52108000 5101 1569 1898 1953 8011;8012 8012 DIVEELSALK 10 1 0 Unmodified _DIVEELSALK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.8181 2 558.810979 1115.6074 82070.55 0.68259 0.00038144 -0.26318 -0.00014707 0.41941 0.00023437 558.810813773744 562.817934078473 111.21 0.62927 111.21 110.95 111.58 0 184 42 7 0 0 0 1.874E-08 2 71577 122.13 122.13 1 1.9811 2.1061 0 36230000 11888000 24342000 5102 1569 1898 1953 8013;8014 8013 DIVEELSALK 10 1 0 Unmodified _DIVEELSALK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.8115 2 558.810979 1115.6074 80595.31 0.86488 0.0004833 -0.27107 -0.00015148 0.59381 0.00033183 558.81080614163 562.817890432959 122.92 1.3571 122.92 122.61 123.97 0 229 60 7 0 0 0 0.00097153 2 73330 78.264 78.264 1 3.4348 2.8594 0 47542000 11433000 36108000 5103 1569 1898 1953 8015;8016 8016 DIVEELSALK 10 1 0 Unmodified _DIVEELSALK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.8177 2 558.810979 1115.6074 NaN NaN NaN -0.3312 -0.00018508 NaN NaN NaN NaN 122.79 0.87304 122.79 122.49 123.36 0 0 0 0 0.010494 1 72240 62.823 32.638 1 NaN NaN 0 42408000 0 42408000 5104 1569 1898 1953 8017 8017 DIVINANPASPPLSLLVLHR 20 0 1 Unmodified _DIVINANPASPPLSLLVLHR_ 0 0 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.0826 3 713.747668 2138.22117 72319.17 1.1069 0.00079002 -0.33501 -0.00023911 0.77185 0.00055091 714.081591667197 717.083509139116 125.29 0.71162 125.29 124.92 125.64 0 233 46 8 0 0 0 2.9836E-05 2 81329 44.089 41.615 1 1.7137 1.7745 0 23111000 7953600 15158000 5105 32 1899 1954 8018;8019 8019 DIVINANPASPPLSLLVLHR 20 0 1 Unmodified _DIVINANPASPPLSLLVLHR_ 0 0 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.0828 3 713.747668 2138.22117 72765.28 1.2 0.0008565 -0.25855 -0.00018454 0.94145 0.00067196 714.081783535771 717.417877641767 124.87 0.73367 124.87 124.52 125.26 0 322 51 10 0 0 0 3.0507E-05 2 83013 43.955 41.481 1 1.6816 1.8172 0 26765000 10854000 15911000 5106 32 1899 1954 8020;8021 8021 DIVISVGIYNLVQK 14 1 0 Unmodified _DIVISVGIYNLVQK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.9621 2 780.953423 1559.89229 72554.72 1.0375 0.00081027 -0.47041 -0.00036737 0.56713 0.0004429 780.952933667174 784.960841459218 124.38 0.58178 124.38 124.16 124.74 0 95 37 5 0 0 0 0.0001464 2 82698 77.379 77.379 1 0.5449 0.54993 0 8047400 4702600 3344800 5107 82 1900 1955 8022;8023 8022 DIVPGDIVEIAVGDK 15 1 0 Unmodified _DIVPGDIVEIAVGDK_ 0 0 0 A0A0S2Z3L2;P16615 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.4247 2 770.416871 1538.81919 70148.33 0.72948 0.000562 0.16602 0.00012791 0.8955 0.00068991 770.416917933449 774.424207729118 124.29 0.50224 124.29 124.02 124.52 -7.6294E-06 153 34 7 0 0 0 0.00026866 2 80552 64.65 64.65 1 2.4277 2.4737 0 13250000 4675400 8574800 5108 554 1901 1956 8024;8025 8024 DIVPGDIVEIAVGDK 15 1 0 Unmodified _DIVPGDIVEIAVGDK_ 0 0 0 A0A0S2Z3L2;P16615 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.4244 2 770.416871 1538.81919 69850.76 0.85007 0.00065491 0.22811 0.00017574 1.0782 0.00083065 770.918479203213 774.424172994836 123.95 0.51385 123.95 123.69 124.21 0 160 34 7 0 0 0 8.4103E-06 2 82225 94.191 85.887 1 2.2564 2.2523 0 14978000 4606200 10372000 5109 554 1901 1956 8026;8027 8026 DIVQFVPFR 9 0 1 Unmodified _DIVQFVPFR_ 0 0 0 A0A024R994;O75131;Q4G168;B3KWK1;B2RD40;A8K8A4;E7ENV7;B7Z370;Q96FN4;Q8IYJ1;Q96A23;O95741;Q86YQ8;Q9HCH3;Q9UBL6 A0A024R994 A0A024R994 CPNE3;CPNE4;CPNE6;CPNE8;CPNE2;CPNE9;CPNE5;CPNE7 Copine-3;Copine-2;Copine-9;Copine-4;Copine-6;Copine-8;Copine-5;Copine-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.8103 2 560.811116 1119.60768 82966.66 0.74639 0.00041858 -0.11658 -6.5379E-05 0.62981 0.0003532 560.81089385296 565.815176355501 115.52 0.64552 115.52 115.21 115.85 0 177 43 6 0 0 0 0.002013 2 73423 85.064 85.064 1 1.464 1.5382 0 11214000 4166500 7047600 5110 271 1902 1957 8028;8029 8029 DIVQFVPFR 9 0 1 Unmodified _DIVQFVPFR_ 0 0 0 A0A024R994;O75131;Q4G168;B3KWK1;B2RD40;A8K8A4;E7ENV7;B7Z370;Q96FN4;Q8IYJ1;Q96A23;O95741;Q86YQ8;Q9HCH3;Q9UBL6 A0A024R994 A0A024R994 CPNE3;CPNE4;CPNE6;CPNE8;CPNE2;CPNE9;CPNE5;CPNE7 Copine-3;Copine-2;Copine-9;Copine-4;Copine-6;Copine-8;Copine-5;Copine-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8155 2 560.811116 1119.60768 81927.89 0.82326 0.0004617 -0.17853 -0.00010012 0.64473 0.00036157 560.810950155998 565.815133081504 114.98 0.575 114.98 114.71 115.29 0 126 36 5 0 0 0 0.00052528 3 74805 109.86 109.86 1 1.7458 1.7225 0 14834000 5233700 9600400 5111 271 1902 1957 8030;8031;8032 8031 DIVQFVPFR 9 0 1 Unmodified _DIVQFVPFR_ 0 0 0 A0A024R994;O75131;Q4G168;B3KWK1;B2RD40;A8K8A4;E7ENV7;B7Z370;Q96FN4;Q8IYJ1;Q96A23;O95741;Q86YQ8;Q9HCH3;Q9UBL6 A0A024R994 A0A024R994 CPNE3;CPNE4;CPNE6;CPNE8;CPNE2;CPNE9;CPNE5;CPNE7 Copine-3;Copine-2;Copine-9;Copine-4;Copine-6;Copine-8;Copine-5;Copine-7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.8113 2 560.811116 1119.60768 81992.46 0.79879 0.00044797 -0.0066853 -3.7492E-06 0.79211 0.00044422 560.810988429407 565.815112310939 126.63 0.58286 126.63 126.3 126.88 0 73 20 5 0 0 0 0.021697 2 76217 50.127 50.127 1 0.73088 0.64783 0 1244000 714360 529630 5112 271 1902 1957 8033;8034 8034 DIVQFVPFR 9 0 1 Unmodified _DIVQFVPFR_ 0 0 0 A0A024R994;O75131;Q4G168;B3KWK1;B2RD40;A8K8A4;E7ENV7;B7Z370;Q96FN4;Q8IYJ1;Q96A23;O95741;Q86YQ8;Q9HCH3;Q9UBL6 A0A024R994 A0A024R994 CPNE3;CPNE4;CPNE6;CPNE8;CPNE2;CPNE9;CPNE5;CPNE7 Copine-3;Copine-2;Copine-9;Copine-4;Copine-6;Copine-8;Copine-5;Copine-7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.8111 2 560.811116 1119.60768 82347.05 0.63605 0.00035671 -0.26163 -0.00014672 0.37443 0.00020998 560.810961132948 565.815041689219 126.43 0.51042 126.43 126.21 126.72 0 68 20 4 0 0 0 0.015684 2 75142 57.281 57.281 1 0.68572 0.59924 0 1411000 866080 544940 5113 271 1902 1957 8035;8036 8036 DIVSLVPR 8 0 1 Unmodified _DIVSLVPR_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573;F5GWH2 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.7758 2 449.77146 897.528367 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.961 1 90.961 90.461 91.461 0 0 0 0 0.038292 1 55008 58.917 17.265 1 5114 150 1903 1958 8037 8037 DIVSLVPR 8 0 1 Unmodified _DIVSLVPR_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573;F5GWH2 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.7754 2 449.77146 897.528367 94041.19 0.28121 0.00012648 0.48808 0.00021952 0.76929 0.000346 449.771824316523 454.775629620645 90.067 0.78679 90.067 89.721 90.507 -7.6294E-06 161 70 4 0 0 0 0.014589 1 55537 62.659 16.643 1 1.1436 1.1467 0 11279000 6476600 4802900 5115 150 1903 1958 8038 8038 DIWLGAQRPDTLLTHVR 17 0 2 Unmodified _DIWLGAQRPDTLLTHVR_ 0 0 1 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.0388 3 664.365558 1990.07484 74324.98 0.77092 0.00051218 0.53882 0.00035797 1.3097 0.00087015 664.700178274847 671.037689713859 110.52 0.42791 110.52 110.34 110.77 0 75 20 5 0 0 0 0.00043758 1 63875 44.294 44.294 1 1.1316 0.97427 0 5280800 2446800 2834000 5116 1392 1904 1959 8039 8039 DIWLGAQRPDTLLTHVR 17 0 2 Unmodified _DIWLGAQRPDTLLTHVR_ 0 0 1 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.3727 3 664.365558 1990.07484 73999.19 0.7371 0.0004897 0.068481 4.5496E-05 0.80558 0.0005352 664.700079610953 671.037543086111 110.28 0.35954 110.28 110.05 110.41 0 77 18 6 0 0 0 0.037541 1 62780 20.091 20.091 1 1.4164 1.2817 0 4197000 1495600 2701500 5117 1392 1904 1959 8040 8040 DKDDDEVFEK 10 2 0 Unmodified _DKDDDEVFEK_ 0 0 1 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;C9J6B6 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.288 2 620.272415 1238.53028 76536.18 0.44674 0.0002771 -0.26131 -0.00016208 0.18543 0.00011502 620.272309740611 628.286389366851 26.698 0.41041 26.698 26.516 26.926 0 108 26 5 0 0 0 2.6761E-30 1 11982 186.87 186.87 1 2.0938 2.4723 0 39676000 13051000 26626000 5118 896 1905 1960 8041 8041 DKDDDEVFEK 10 2 0 Unmodified _DKDDDEVFEK_ 0 0 1 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;C9J6B6 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.2868 2 620.272415 1238.53028 78035.93 0.64189 0.00039815 0.008181 5.0745E-06 0.65007 0.00040322 620.272414386262 628.286541883112 26.202 0.39768 26.202 26.02 26.418 0 78 20 6 0 0 0 1.7596E-39 2 11594 192.5 192.5 1 1.8041 2.0871 0 40937000 12517000 28420000 5119 896 1905 1960 8042;8043 8042 DKLDETGNSLK 11 2 0 Unmodified _DKLDETGNSLK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.3259 2 610.311874 1218.6092 77290.81 0.23583 0.00014393 0.03838 2.3424E-05 0.27421 0.00016736 610.311940396022 618.326057907828 23.654 1.0092 23.654 23.25 24.26 1.9073E-06 220 46 10 0 0 0 2.9468E-153 2 9434 289.22 230.99 1 0.8317 0.98067 0 657820000 381810000 276020000 5120 1471 1906 1961 8044;8045 8045 DKLDETGNSLK 11 2 0 Unmodified _DKLDETGNSLK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3259 2 610.311874 1218.6092 76640.39 0.15928 9.7209E-05 -0.069448 -4.2385E-05 0.08983 5.4824E-05 610.311905785601 618.325958461062 23.27 0.8872 23.27 23.017 23.904 0 226 37 12 0 0 0 1.8182E-111 5 9090 253.71 208.99 1 0.7492 0.87776 0 979020000 569930000 409090000 5121 1471 1906 1961 8046;8047;8048;8049;8050 8047 DKLDETGNSLK 11 2 0 Unmodified _DKLDETGNSLK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.3124 2 610.311874 1218.6092 76849.88 0.2246 0.00013708 -0.25378 -0.00015489 -0.029182 -1.781E-05 610.31224638697 618.325905135678 25.933 1.1412 25.933 25.718 26.859 0 299 49 13 0 0 0 2.7541E-40 2 9576 196.11 146.58 1 1.3332 1.1188 0 424840000 169500000 255340000 5122 1471 1906 1961 8051;8052 8051 DKLDETGNSLK 11 2 0 Unmodified _DKLDETGNSLK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.3121 2 610.311874 1218.6092 76914.07 0.39915 0.00024361 -0.1945 -0.0001187 0.20465 0.0001249 610.312342872427 618.325928360216 26.015 1.161 26.015 25.744 26.905 0 284 52 13 0 0 0 1.5632E-09 2 9082 133.42 103.95 1 1.2798 1.1035 0 347690000 152250000 195440000 5123 1471 1906 1961 8053;8054 8054 DKLDETGVALK 11 2 0 Unmodified _DKLDETGVALK_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.827 2 594.82716 1187.63977 76873.5 0.39246 0.00023345 0.18659 0.00011099 0.57905 0.00034444 594.827229484644 602.841373594064 49.167 0.73186 49.167 48.893 49.625 0 298 59 8 0 0 0 0.027099 2 23947 69.346 22.527 1 1.0588 0.90367 0 16425000 7332000 9093200 5124 1679 1907 1962 8055;8056 8056 DKLDETGVALK 11 2 0 Unmodified _DKLDETGVALK_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.8412 2 594.82716 1187.63977 77593.34 0.29224 0.00017383 0.16301 9.6963E-05 0.45525 0.0002708 594.827217216065 602.84140643074 49.428 0.70699 49.428 49.135 49.842 0 299 54 8 0 0 0 0.0011023 2 23533 92.611 32.68 1 1.0037 0.84991 0 15714000 7501400 8212800 5125 1679 1907 1962 8057;8058 8057 DKLDGNELDLSLSDLNEVPVK 21 2 0 Unmodified _DKLDGNELDLSLSDLNEVPVK_ 0 0 1 Q96AG4;I3L223 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.7324 3 771.732188 2312.17474 69876.96 0.74501 0.00057495 0.29443 0.00022722 1.0394 0.00080217 772.401212132544 777.07558003774 115.45 0.5024 115.45 115.27 115.77 0 129 34 6 0 0 0 0.00041489 2 73534 27.055 18.868 1 1.1813 1.393 0 14764000 6979900 7784300 5126 1958 1908 1963 8059;8060 8060 DKLDGNELDLSLSDLNEVPVK 21 2 0 Unmodified _DKLDGNELDLSLSDLNEVPVK_ 0 0 1 Q96AG4;I3L223 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.0674 3 771.732188 2312.17474 68283.28 0.89333 0.00068941 0.023441 1.809E-05 0.91677 0.0007075 772.066711106488 777.074789396857 126.73 0.76527 126.73 126.42 127.19 0 192 30 13 0 0 0 6.6206E-07 3 76191 44.632 36.445 1 0.83786 0.71288 0 30064000 16365000 13699000 5127 1958 1908 1963 8061;8062;8063 8062 DKLDGNELDLSLSDLNEVPVK 21 2 0 Unmodified _DKLDGNELDLSLSDLNEVPVK_ 0 0 1 Q96AG4;I3L223 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.0665 3 771.732188 2312.17474 67695.52 0.75903 0.00058577 -0.13495 -0.00010415 0.62408 0.00048162 772.066487715711 777.074769683639 126.6 0.65208 126.6 126.32 126.98 0 200 28 11 0 0 0 2.496E-09 3 75199 70.352 62.164 1 0.8555 0.72886 0 44996000 25457000 19539000 5128 1958 1908 1963 8064;8065;8066 8065 DKLDILGAAETGSGK 15 2 0 Unmodified _DKLDILGAAETGSGK_ 0 0 1 B4DKV2;G3V529;Q9GZR7;Q59FS7;B4DM03 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.8904 2 737.89102 1473.76749 69300.03 0.53002 0.0003911 -0.17097 -0.00012615 0.35906 0.00026494 737.8903197327 745.905255461514 80.418 0.35818 80.418 80.262 80.621 0 125 28 6 0 0 0 0.0011909 1 43454 77.912 77.912 1 1.0082 0.8671 0 6567900 3243600 3324300 5129 993 1909 1964 8067 8067 DKLDILGAAETGSGK 15 2 0 Unmodified _DKLDILGAAETGSGK_ 0 0 1 B4DKV2;G3V529;Q9GZR7;Q59FS7;B4DM03 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.8907 2 737.89102 1473.76749 69670.63 0.65359 0.00048227 0.1574 0.00011614 0.81098 0.00059842 737.890817886287 745.905325809518 80.649 0.3802 80.649 80.476 80.857 0 127 28 6 0 0 0 0.0011909 2 42766 74.475 74.475 1 0.95383 0.80976 0 6021900 3416700 2605200 5130 993 1909 1964 8068;8069 8069 DKPLPPLLAR 10 1 1 Unmodified _DKPLPPLLAR_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4;Q12873;B4DLC6;Q2TAZ1 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.3481 2 560.347866 1118.68118 80095.2 0.53772 0.00030131 0.031229 1.7499E-05 0.56895 0.00031881 560.347776380072 569.359150292834 69.465 1.0228 69.465 68.874 69.897 0 487 88 8 0 0 0 0.014438 2 40110 67.993 61.543 1 0.72854 0.87689 0 95815000 54999000 40815000 5131 515;1701 1910 1965 8070;8071 8070 DKPLPPLLAR 10 1 1 Unmodified _DKPLPPLLAR_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4;Q12873;B4DLC6;Q2TAZ1 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.3475 2 560.347866 1118.68118 80794.63 0.53689 0.00030084 0.093963 5.2652E-05 0.63085 0.0003535 560.347786921009 569.359075934385 67.791 1.1188 67.791 67.23 68.349 0 472 91 8 0 0 0 0.022146 2 40437 61.962 58.391 1 0.6903 0.8139 0 107860000 59045000 48816000 5132 515;1701 1910 1965 8072;8073 8073 DKYPNLQVIGGNVVTAAQAK 20 2 0 Unmodified _DKYPNLQVIGGNVVTAAQAK_ 0 0 1 H0Y4R1;P12268;B7Z1G4 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.3911 3 696.047894 2085.12185 72214.27 0.68954 0.00047995 -0.0072094 -5.0181E-06 0.68233 0.00047493 696.04785559212 701.390692070075 108.51 0.47898 108.51 108.28 108.76 0 159 22 10 0 0 0 3.7513E-13 2 62322 89.831 89.831 1 1.4182 1.21 0 17426000 7074500 10352000 5133 1282 1911 1966 8074;8075 8074 DKYPNLQVIGGNVVTAAQAK 20 2 0 Unmodified _DKYPNLQVIGGNVVTAAQAK_ 0 0 1 H0Y4R1;P12268;B7Z1G4 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 701.7255 3 696.047894 2085.12185 73622.08 0.57547 0.00040056 0.079784 5.5533E-05 0.65526 0.00045609 696.047933257647 701.724992276844 108.39 0.38828 108.39 108.2 108.59 0 137 18 10 0 0 0 1.2279E-06 2 61307 47.472 47.472 1 1.5095 1.277 0 13453000 4823600 8629400 5134 1282 1911 1966 8076;8077 8076 DLAALGDK 8 1 0 Unmodified _DLAALGDK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.7267 2 401.718893 801.423233 NaN NaN NaN 0.99117 0.00039817 NaN NaN NaN NaN 43.232 0.50803 43.232 42.927 43.435 0 0 0 0 0.042931 1 23116 52.716 15.158 1 NaN NaN 0 6235700 0 6235700 5135 523 1912 1967 8078 8078 DLAGSIIGK 9 1 0 Unmodified _DLAGSIIGK_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;B3KU16;S4R359 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.2629 2 437.255643 872.496732 94416.55 -0.13293 -5.8125E-05 0.26239 0.00011473 0.12946 5.6608E-05 437.255502622556 441.262749498698 73.288 0.25794 73.288 73.13 73.388 0 77 23 4 0 0 0 0.015433 1 42962 54.776 22.821 1 1.3132 1.417 0 37270000 16856000 20414000 5136 102 1913 1968 8079 8079 DLAIYYSYGDFLLGK 15 1 0 Unmodified _DLAIYYSYGDFLLGK_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.4408 2 869.440346 1736.86614 66961.72 0.75822 0.00065923 -0.2042 -0.00017754 0.55402 0.00048169 869.44030126134 873.948988020026 131.6 0.62093 131.6 131.34 131.96 0 131 40 6 0 0 0 0.00014588 1 85833 79.693 79.693 1 0.9014 0.94109 0 12192000 6399900 5791800 5137 1570 1914 1969 8080 8080 DLAIYYSYGDFLLGK 15 1 0 Unmodified _DLAIYYSYGDFLLGK_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.4493 2 869.440346 1736.86614 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.47 1 131.47 130.97 131.97 1.5259E-05 0 0 0 0.0015177 1 85804 66.289 49.657 1 5138 1570 1914 1969 8081 8081 DLAIYYSYGDFLLGK 15 1 0 Unmodified _DLAIYYSYGDFLLGK_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.9442 2 869.440346 1736.86614 66054.77 1.0991 0.00095557 -0.34883 -0.00030328 0.75024 0.00065229 869.44010121325 873.948730536072 131.29 0.63466 131.29 130.96 131.6 0 223 48 6 0 0 0 1.3111E-05 2 87722 90.653 90.653 1 0.93148 0.93671 0 13574000 6832400 6742000 5139 1570 1914 1969 8082;8083 8083 DLALGLVPGDR 11 0 1 Unmodified _DLALGLVPGDR_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.3211 2 563.316763 1124.61897 NaN NaN NaN -0.8882 -0.00050034 NaN NaN NaN NaN 100.75 0.26839 100.75 100.69 100.96 7.6294E-06 0 0 0 0.034059 1 63397 48.981 17.907 1 NaN NaN 0 2935000 0 2935000 5140 12 1915 1970 8084 8084 DLALVNDQLLGFVR 14 0 1 Unmodified _DLALVNDQLLGFVR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.9446 2 786.940847 1571.86714 69915.74 0.86366 0.00067965 -0.36891 -0.00029031 0.49475 0.00038934 787.441938330168 791.944735715277 130.41 0.62523 130.41 130.09 130.71 0 178 33 7 0 0 0 7.0939E-21 3 84987 138.25 138.25 1 0.70525 0.739 0 10940000 6530700 4409100 5141 1270 1916 1971 8085;8086;8087 8087 DLALVNDQLLGFVR 14 0 1 Unmodified _DLALVNDQLLGFVR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.9404 2 786.940847 1571.86714 69439.75 0.7832 0.00061633 -0.13256 -0.00010432 0.65064 0.00051201 786.94059058535 791.944685695582 130.05 0.50565 130.05 129.87 130.37 0 157 35 7 0 0 0 3.2049E-06 1 86815 103.22 103.22 1 0.65921 0.66573 0 10109000 6600600 3508300 5142 1270 1916 1971 8088 8088 DLANIAEVEVSIPAK 15 1 0 Unmodified _DLANIAEVEVSIPAK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3;H7C2D1 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.9326 2 784.930145 1567.84574 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.96 1 112.96 112.46 113.46 0 0 0 0 0.00050404 1 73208 80.469 60.165 1 5143 154 1917 1972 8089 8089 DLANIAEVEVSIPAK 15 1 0 Unmodified _DLANIAEVEVSIPAK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3;H7C2D1 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.9383 2 784.930145 1567.84574 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.03 1 113.03 112.53 113.53 0 0 0 0 6.3843E-07 1 73272 98.337 55.62 1 5144 154 1917 1972 8090 8090 DLANLEVPHELPTK 14 1 0 Unmodified _DLANLEVPHELPTK_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.4252 2 788.422487 1574.83042 69393.66 0.70214 0.00055358 0.36945 0.00029128 1.0716 0.00084486 788.42330599421 792.43013157213 88.773 0.5733 88.773 88.459 89.033 0 190 42 6 0 0 0 0.00014985 1 53425 96.756 96.756 1 0.75256 0.74235 0 24904000 14010000 10894000 5145 591 1918 1973 8091 8091 DLANLEVPHELPTK 14 1 0 Unmodified _DLANLEVPHELPTK_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.9507 3 525.95075 1574.83042 83854.8 0.45635 0.00024002 0.24656 0.00012968 0.70292 0.0003697 526.285481183127 528.621946253122 88.752 0.72986 88.752 88.342 89.072 0 144 56 6 0 0 0 0.0015778 2 53611 44.294 44.294 1 0.49865 0.51924 0 29713000 18352000 11361000 5146 591 1918 1973 8092;8093 8093 DLANLEVPHELPTK 14 1 0 Unmodified _DLANLEVPHELPTK_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.4307 2 788.422487 1574.83042 70423.16 1.0883 0.00085803 0.13765 0.00010853 1.2259 0.00096655 788.422801546776 792.42970054105 87.762 0.38626 87.762 87.533 87.919 0 136 27 7 0 0 0 1.5582E-07 2 54047 118.76 118.76 1 0.72524 0.81765 0 61447000 36062000 25385000 5147 591 1918 1973 8094;8095 8094 DLANLEVPHELPTK 14 1 0 Unmodified _DLANLEVPHELPTK_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.6227 3 525.95075 1574.83042 84496.09 0.7994 0.00042044 -0.34906 -0.00018359 0.45034 0.00023686 525.950299101115 528.621947175065 87.778 0.38731 87.778 87.544 87.932 0 153 27 9 0 0 0 0.00059716 2 54083 50.102 50.102 1 0.71064 0.80049 0 58880000 34103000 24777000 5148 591 1918 1973 8096;8097 8096 DLANLEVPHELPTK 14 1 0 Unmodified _DLANLEVPHELPTK_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.4306 2 788.422487 1574.83042 70096.48 0.46748 0.00036857 0.20226 0.00015947 0.66974 0.00052804 788.924977904182 792.429577368846 101.26 0.57893 101.26 101.03 101.6 0 135 39 5 0 0 0 0.011517 1 57269 41.684 41.684 1 4.9401 3.9156 0 4760300 660930 4099400 5149 591 1918 1973 8098 8098 DLANLEVPHELPTK 14 1 0 Unmodified _DLANLEVPHELPTK_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.9335 2 788.422487 1574.83042 72269.99 0.59634 0.00047017 0.44022 0.00034708 1.0366 0.00081725 788.423756148562 792.429746583317 101.1 0.59147 101.1 100.83 101.43 0 153 37 7 0 0 0 0.0001142 1 56311 88.163 88.163 1 3.5651 2.9195 0 4928900 1369000 3559900 5150 591 1918 1973 8099 8099 DLAPIGIR 8 0 1 Unmodified _DLAPIGIR_ 0 0 0 A0A0S2Z410;Q99714 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.7582 2 427.758352 853.502152 93349.65 -0.075632 -3.2352E-05 0.35418 0.0001515 0.27855 0.00011915 427.758295752571 432.762463851327 78.032 0.88489 78.032 77.473 78.358 0 251 69 6 0 0 0 0.011674 1 45964 69.383 19.794 1 1.9571 2.095 0 45506000 15816000 29690000 5151 555 1919 1974 8100 8100 DLAPYLPSVTPGLK 14 1 0 Unmodified _DLAPYLPSVTPGLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.9222 2 735.913767 1469.81298 72543.93 0.90089 0.00066297 0.033283 2.4494E-05 0.93417 0.00068747 736.414992280725 739.921023992437 115 0.50743 115 114.79 115.3 0 166 32 8 0 0 0 0.0053616 3 73057 43.897 43.897 1 1.794 1.7695 0 19444000 5834100 13610000 5152 1205 1920 1975 8101;8102;8103 8101 DLAPYLPSVTPGLK 14 1 0 Unmodified _DLAPYLPSVTPGLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.9225 2 735.913767 1469.81298 72358.81 0.78311 0.0005763 -0.022148 -1.6299E-05 0.76096 0.00056 735.913432926281 739.920947215392 114.59 0.54109 114.59 114.35 114.89 0 152 33 7 0 0 0 0.00019192 1 74481 70.488 70.488 1 1.7434 1.7864 0 17591000 6045200 11546000 5153 1205 1920 1975 8104 8104 DLAPYLPSVTPGLK 14 1 0 Unmodified _DLAPYLPSVTPGLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.915 2 735.913767 1469.81298 71976.39 1.0097 0.00074305 0.019648 1.4459E-05 1.0293 0.00075751 736.415195421367 739.920961831777 126.21 0.58092 126.21 125.96 126.54 0 86 21 6 0 0 0 0.0051891 2 75899 44.188 44.188 1 1.1373 0.92787 0 2647700 1273400 1374300 5154 1205 1920 1975 8105;8106 8106 DLAPYLPSVTPGLK 14 1 0 Unmodified _DLAPYLPSVTPGLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.9147 2 735.913767 1469.81298 72841.66 0.75601 0.00055636 0.25124 0.00018489 1.0072 0.00074125 735.913577742471 739.921008598452 126.1 0.55493 126.1 125.86 126.42 7.6294E-06 112 24 7 0 0 0 0.023159 2 74844 33.057 33.057 1 1.1246 0.91159 0 2767600 1413900 1353700 5155 1205 1920 1975 8107;8108 8108 DLAQALINR 9 0 1 Unmodified _DLAQALINR_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.295 2 507.290548 1012.56654 83882.05 0.61042 0.00030966 -0.11614 -5.8919E-05 0.49428 0.00025074 507.290521850758 512.294492225713 82.622 0.86401 82.622 82.071 82.935 0 386 72 7 0 0 0 4.0887E-05 2 49117 112.17 70.207 1 1.0164 1.1669 0 138670000 76969000 61705000 5156 1570 1921 1976 8109;8110 8109 DLAQALINR 9 0 1 Unmodified _DLAQALINR_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.2901 2 507.290548 1012.56654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.308 1 81.308 80.808 81.808 0 0 0 0 0.001453 1 49648 95.815 63.688 1 5157 1570 1921 1976 8111 8111 DLAQALINR 9 0 1 Unmodified _DLAQALINR_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.2945 2 507.290548 1012.56654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.326 1 81.326 80.826 81.826 0 0 0 0 0.0028942 1 49663 79.469 41.91 1 5158 1570 1921 1976 8112 8112 DLAQALINR 9 0 1 Unmodified _DLAQALINR_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 512.2947 2 507.290548 1012.56654 85206.99 0.47476 0.00024084 -0.033555 -1.7022E-05 0.4412 0.00022382 507.290475074421 512.294491445186 93.798 1.0958 93.798 93.326 94.422 7.6294E-06 371 71 9 0 0 0 0.015433 2 52241 54.776 37.411 1 1.1129 0.91328 0 17094000 7689900 9403800 5159 1570 1921 1976 8113;8114 8113 DLAQALINR 9 0 1 Unmodified _DLAQALINR_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.2909 2 507.290548 1012.56654 84792.41 0.47346 0.00024018 -0.12177 -6.1771E-05 0.35169 0.00017841 507.290458184311 512.294475443331 93.862 1.1212 93.862 93.35 94.471 -7.6294E-06 335 73 6 0 0 0 0.00049492 2 51503 98.458 62.578 1 1.1078 0.9289 0 16757000 7767100 8990100 5160 1570 1921 1976 8115;8116 8116 DLAQDEAVWLER 12 0 1 Unmodified _DLAQDEAVWLER_ 0 0 0 A2IDA3;Q1W6H1;P29372 A2IDA3 A2IDA3 MPG DNA-3-methyladenine glycosylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.8576 2 722.85698 1443.69941 72424.41 1.2247 0.00088527 -0.25029 -0.00018092 0.97439 0.00070434 722.857251417222 727.860650470015 115.74 0.44708 115.74 115.53 115.98 0 69 19 5 0 0 0 0.0024793 1 67810 68.069 50.633 1 0.65529 0.56646 0 2619700 1418700 1201000 5161 651 1922 1977 8117 8117 DLAQDEAVWLER 12 0 1 Unmodified _DLAQDEAVWLER_ 0 0 0 A2IDA3;Q1W6H1;P29372 A2IDA3 A2IDA3 MPG DNA-3-methyladenine glycosylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.858 2 722.85698 1443.69941 73138.13 0.8826 0.00063799 -0.33951 -0.00024542 0.54309 0.00039257 722.857279096588 727.860656573599 115.69 0.44878 115.69 115.45 115.9 -7.6294E-06 66 20 5 0 0 0 0.0006885 2 66863 77.64 60.204 1 0.47916 0.42781 0 2323200 1621000 702140 5162 651 1922 1977 8118;8119 8118 DLAQINDLQAQLEEANK 17 1 0 Unmodified _DLAQINDLQAQLEEANK_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614;B4DYM1;B4DZ32;B3KVF8;B4DFN7 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.9934 2 956.984169 1911.95378 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.56 1 108.56 108.06 109.06 -7.6294E-06 0 0 0 0.00022233 1 67817 76.073 59.935 1 5163 12 1923 1978 8120 8120 DLASVNNLLK 10 1 0 Unmodified _DLASVNNLLK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.8187 2 543.811313 1085.60807 81761.22 0.7347 0.00039954 -0.25194 -0.00013701 0.48276 0.00026253 543.811475565918 547.818392558925 108.14 0.56956 108.14 107.89 108.46 0 95 29 5 0 0 0 0.036959 1 62043 40.002 32.781 1 2.8227 2.3127 0 2517400 542860 1974500 5164 523 1924 1979 8121 8121 DLASVQALLR 10 0 1 Unmodified _DLASVQALLR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.3193 2 543.319306 1084.62406 85786.52 0.72476 0.00039378 -0.57756 -0.0003138 0.1472 7.9977E-05 543.319029495456 548.323238325198 109.5 0.47189 109.5 109.2 109.67 0 89 35 4 0 0 0 0.0018674 1 68445 71.692 44.562 1 1.572 1.5969 0 7510100 2969100 4541000 5165 523 1925 1980 8122 8122 DLASVQALLR 10 0 1 Unmodified _DLASVQALLR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.3196 2 543.319306 1084.62406 NaN NaN NaN -0.39436 -0.00021427 NaN NaN NaN NaN 108.87 0.29438 108.87 108.76 109.06 0 0 0 0 0.044232 1 69769 48.283 14.486 1 NaN NaN 0 2824700 2824700 0 5166 523 1925 1980 8123 8123 DLASVSLK 8 1 0 Unmodified _DLASVSLK_ 0 0 0 B3GQE6;Q53G15;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 420.7491 2 416.742368 831.470183 94951.27 0.43211 0.00018008 2.4125 0.0010054 2.8446 0.0011855 416.742219064097 420.749241032368 60.149 0.99547 60.149 59.723 60.719 3.8147E-06 331 89 6 0 0 0 0.013465 3 34333 65.252 23.75 1 1.1733 1.2603 0 39591000 18625000 20966000 5167 899;1099 1926 1981 8124;8125;8126 8124 DLAVPAALTPR 11 0 1 Unmodified _DLAVPAALTPR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.3267 2 562.327131 1122.63971 86140.41 0.68843 0.00038712 -1.2093 -0.00068001 -0.52084 -0.00029288 562.32647740585 567.329980700581 93.587 0.49732 93.587 93.365 93.863 7.6294E-06 84 43 4 0 0 0 0.0070376 1 56779 53.327 35.701 1 1.1014 1.1002 0 8824100 4414400 4409700 5168 1937 1927 1982 8127 8127 DLAYCVSQLPLTER 14 0 1 Unmodified _DLAYCVSQLPLTER_ 0 0 0 B3KMS0;Q15021;B3KY03 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.9244 2 832.919255 1663.82396 67125.04 0.83388 0.00069456 -0.035742 -2.977E-05 0.79814 0.00066478 832.919461579668 837.923580608366 107.11 0.78519 107.11 106.7 107.48 0 328 60 9 0 0 0 5.2238E-30 3 66651 159.99 144.1 1 0.94321 1.0491 0 76389000 40653000 35736000 5169 908 1928 1983 8128;8129;8130 8130 DLAYCVSQLPLTER 14 0 1 Unmodified _DLAYCVSQLPLTER_ 0 0 0 B3KMS0;Q15021;B3KY03 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.9196 2 832.919255 1663.82396 67266.68 0.9458 0.00078778 -0.17424 -0.00014513 0.77156 0.00064265 832.919381314364 837.923464131525 106.64 0.8096 106.64 106.14 106.95 7.6294E-06 313 58 9 0 0 0 1.3461E-06 1 67831 108.72 95.054 1 0.88738 1.0122 0 95526000 54947000 40580000 5170 908 1928 1983 8131 8131 DLAYCVSQLPLTER 14 0 1 Unmodified _DLAYCVSQLPLTER_ 0 0 0 B3KMS0;Q15021;B3KY03 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.9244 2 832.919255 1663.82396 65582.19 0.78901 0.00065718 -0.059547 -4.9598E-05 0.72946 0.00060759 832.919262473985 837.923523245781 118.04 0.94461 118.04 117.77 118.72 0 243 41 12 0 0 0 9.9732E-05 2 69525 85.288 73.075 1 1.5871 1.3686 0 73300000 27656000 45644000 5171 908 1928 1983 8132;8133 8132 DLAYCVSQLPLTER 14 0 1 Unmodified _DLAYCVSQLPLTER_ 0 0 0 B3KMS0;Q15021;B3KY03 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.423 2 832.919255 1663.82396 66285.95 0.59402 0.00049477 -0.11476 -9.5584E-05 0.47926 0.00039919 832.919342397515 837.923357692279 117.96 0.97195 117.96 117.67 118.65 7.6294E-06 250 46 11 0 0 0 5.1054E-05 2 68521 83.314 73.992 1 1.5811 1.3797 0 68099000 27276000 40823000 5172 908 1928 1983 8134;8135 8134 DLDDFQSWLSR 11 0 1 Unmodified _DLDDFQSWLSR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3234 2 691.322773 1380.63099 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.7 1 117.7 117.2 118.2 7.6294E-06 0 0 0 0.0089079 1 75381 60.434 40.104 1 5173 415 1929 1984 8136 8136 DLDDFQSWLSR 11 0 1 Unmodified _DLDDFQSWLSR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.3231 2 691.322773 1380.63099 75802.78 0.64037 0.0004427 -0.006702 -4.6332E-06 0.63366 0.00043807 691.322507942279 696.326930303729 117.41 0.53663 117.41 117.18 117.71 0 94 31 4 0 0 0 0.00085012 1 76921 72.006 61.697 1 1.3033 1.3143 0 6211400 2878300 3333000 5174 415 1929 1984 8137 8137 DLDEDANGITDEGK 14 1 0 Unmodified _DLDEDANGITDEGK_ 0 0 0 Q5QJE6;J3KP30 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.3331 2 746.325907 1490.63726 69490.6 0.60851 0.00045415 0.07776 5.8034E-05 0.68627 0.00051218 746.326083229277 750.332696971433 50.752 0.74596 50.752 50.375 51.121 -3.8147E-06 294 69 6 0 0 0 3.507E-57 3 27939 191.53 178.95 1 0.9463 1.0476 0 58053000 29311000 28742000 5175 1813 1930 1985 8138;8139;8140 8138 DLDEDANGITDEGK 14 1 0 Unmodified _DLDEDANGITDEGK_ 0 0 0 Q5QJE6;J3KP30 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.3253 2 746.325907 1490.63726 70494.13 0.93121 0.00069499 0.25218 0.00018821 1.1834 0.0008832 746.325879873533 750.333317076619 49.918 0.76189 49.918 49.498 50.26 0 284 63 6 0 0 0 2.9106E-15 1 27959 137.01 128.91 1 0.88042 0.99294 0 62460000 30523000 31937000 5176 1813 1930 1985 8141 8141 DLDEDANGITDEGK 14 1 0 Unmodified _DLDEDANGITDEGK_ 0 0 0 Q5QJE6;J3KP30 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.3317 2 746.325907 1490.63726 69529.17 0.67917 0.00050688 -0.2328 -0.00017375 0.44636 0.00033313 746.325685285221 750.332695927505 58.611 0.85285 58.611 58.257 59.109 0 370 62 8 0 0 0 1.1703E-06 4 29707 109.24 103.75 1 1.5488 1.2025 0 12726000 5134700 7590800 5177 1813 1930 1985 8142;8143;8144;8145 8143 DLDEDANGITDEGK 14 1 0 Unmodified _DLDEDANGITDEGK_ 0 0 0 Q5QJE6;J3KP30 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 750.8354 2 746.325907 1490.63726 70591.44 0.46627 0.00034799 0.0085599 6.3884E-06 0.47483 0.00035438 746.325824125069 750.332683695772 59.407 1.114 59.407 58.928 60.042 0 447 84 8 0 0 0 1.4487E-09 2 29577 120.03 116.61 1 1.559 1.2885 0 11894000 4555800 7337700 5178 1813 1930 1985 8146;8147 8147 DLDEEIFDDDDFYHQLLR 18 0 1 Unmodified _DLDEEIFDDDDFYHQLLR_ 0 0 0 Q9NY61;A0A087WWS8;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.6788 3 766.678084 2297.01242 69604.18 0.9021 0.00069162 0.013431 1.0298E-05 0.91554 0.00070192 767.012374272587 770.348471357815 124.67 0.98442 124.67 124.34 125.32 7.6294E-06 441 66 9 0 0 0 2.4323E-08 2 80823 97.579 96.263 1 0.9721 0.99805 0 36256000 18224000 18032000 5179 2080 1931 1986 8148;8149 8149 DLDEEIFDDDDFYHQLLR 18 0 1 Unmodified _DLDEEIFDDDDFYHQLLR_ 0 0 0 Q9NY61;A0A087WWS8;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1150.0143 2 1149.51349 2297.01242 59076.21 0.32824 0.00037731 -0.22028 -0.00025321 0.10796 0.0001241 1150.01518055247 1155.01753731513 124.73 0.73674 124.73 124.37 125.11 0 206 50 7 0 0 0 1.16E-07 2 80882 88.021 81.723 1 0.77797 0.81383 0 12928000 8641000 4286500 5180 2080 1931 1986 8150;8151 8150 DLDEEIFDDDDFYHQLLR 18 0 1 Unmodified _DLDEEIFDDDDFYHQLLR_ 0 0 0 Q9NY61;A0A087WWS8;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.3494 3 766.678084 2297.01242 70269.16 1.0321 0.00079125 0.03855 2.9555E-05 1.0706 0.00082081 767.012353770018 770.348584521674 124.33 1.2115 124.33 124.06 125.27 -7.6294E-06 481 81 10 0 0 0 1.1876E-51 3 82575 139.67 137.92 1 0.96143 1.0846 0 46915000 23419000 23496000 5181 2080 1931 1986 8152;8153;8154 8152 DLDEEIFDDDDFYHQLLR 18 0 1 Unmodified _DLDEEIFDDDDFYHQLLR_ 0 0 0 Q9NY61;A0A087WWS8;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1155.0184 2 1149.51349 2297.01242 58579 0.48568 0.00055829 -0.41394 -0.00047583 0.071732 8.2457E-05 1150.01521997328 1155.0179870619 124.4 0.76077 124.4 124.15 124.91 -7.6294E-06 278 49 8 0 0 0 7.4309E-06 2 82811 81.92 81.92 1 0.85792 0.86196 0 19180000 12544000 6636500 5182 2080 1931 1986 8155;8156 8156 DLDEEIFDDDDFYHQLLR 18 0 1 Unmodified _DLDEEIFDDDDFYHQLLR_ 0 0 0 Q9NY61;A0A087WWS8;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 766.6789 3 766.678084 2297.01242 69617.42 0.89741 0.00068802 0.29529 0.00022639 1.1927 0.00091442 767.012739874657 770.348650915593 134.52 0.27075 134.52 134.43 134.7 0 50 8 9 0 0 0 8.4624E-06 1 82174 56.906 55.899 1 1.8241 1.5436 0 31002000 11154000 19847000 5183 2080 1931 1986 8157 8157 DLDEEIFDDDDFYHQLLR 18 0 1 Unmodified _DLDEEIFDDDDFYHQLLR_ 0 0 0 Q9NY61;A0A087WWS8;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 767.0139 3 766.678084 2297.01242 69786.56 0.79599 0.00061027 -0.0069142 -5.301E-06 0.78908 0.00060497 767.012287992083 770.34840704241 134.46 0.26543 134.46 134.36 134.63 0 51 8 9 0 0 0 6.208E-23 1 81231 142.01 139.79 1 1.369 1.1946 0 60298000 25146000 35152000 5184 2080 1931 1986 8158 8158 DLDEEIFDDDDFYHQLLR 18 0 1 Unmodified _DLDEEIFDDDDFYHQLLR_ 0 0 0 Q9NY61;A0A087WWS8;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1155.0203 2 1149.51349 2297.01242 57345.91 0.17023 0.00019568 0.081091 9.3216E-05 0.25132 0.0002889 1150.01526812455 1155.02040158881 134.46 0.14117 134.46 134.39 134.53 0 18 4 6 0 0 0 0.0072166 1 81255 31.708 30.007 1 1.7301 1.5092 0 34863000 12202000 22661000 5185 2080 1931 1986 8159 8159 DLDELSRYPEDK 12 1 1 Unmodified _DLDELSRYPEDK_ 0 0 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.3531 2 740.351728 1478.6889 69500.36 0.77869 0.0005765 0.10837 8.0231E-05 0.88706 0.00065673 740.853565757573 749.363052801993 56.401 0.74298 56.401 55.993 56.736 -3.8147E-06 219 64 5 0 0 0 3.0501E-05 2 31682 110.08 110.08 1 1.3837 1.5574 0 22196000 9132200 13063000 5186 542 1932 1987 8160;8161 8161 DLDELSRYPEDK 12 1 1 Unmodified _DLDELSRYPEDK_ 0 0 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.3541 2 740.351728 1478.6889 70078.28 0.4845 0.0003587 0.45937 0.00034009 0.94387 0.00069879 740.35173136222 749.363529534173 55.461 0.65922 55.461 55.153 55.812 -3.8147E-06 183 47 5 0 0 0 3.4386E-17 2 31826 143.79 143.79 1 1.3786 1.6001 0 37190000 14461000 22728000 5187 542 1932 1987 8162;8163 8163 DLDELSRYPEDK 12 1 1 Unmodified _DLDELSRYPEDK_ 0 0 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 749.3627 2 740.351728 1478.6889 70424.62 0.86245 0.00063852 0.14196 0.0001051 1.0044 0.00074362 740.853446418028 749.362809118171 65.402 0.95749 65.402 65.068 66.026 0 178 72 5 0 0 0 0.014032 1 33700 58.172 58.172 1 1.1738 0.9835 0 6743500 3035200 3708200 5188 542 1932 1987 8164 8164 DLDELSRYPEDK 12 1 1 Unmodified _DLDELSRYPEDK_ 0 0 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.3519 2 740.351728 1478.6889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.323 1 65.323 64.823 65.823 0 0 0 0 0.029646 1 33763 59.198 42.621 1 5189 542 1932 1987 8165 8165 DLDLDAFAEELER 13 0 1 Unmodified _DLDLDAFAEELER_ 0 0 0 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.3651 2 768.364835 1534.71512 NaN NaN NaN 0.25064 0.00019259 NaN NaN NaN NaN 128.14 0.64448 128.14 127.87 128.52 0 0 0 0 5.8191E-09 1 83434 110.66 92.797 1 NaN NaN 0 3936900 3936900 0 5190 1870 1933 1988 8166 8166 DLDRPESQSPK 11 1 1 Unmodified _DLDRPESQSPK_ 0 0 1 Q8WUA4;Q53QN0;A0A087WZD8 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3264 2 636.314948 1270.61534 NaN NaN NaN NaN NaN NaN NaN NaN NaN 17.842 1 17.842 17.342 18.342 0 0 0 0 0.029574 1 4941 61.213 40.883 1 5191 1938 1934 1989 8167 8167 DLDVITIPSK 10 1 0 Unmodified _DLDVITIPSK_ 0 0 0 B0AZS5;O00139;B4DM85;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.8135 2 550.813522 1099.61249 NaN NaN NaN 0.13016 7.1696E-05 NaN NaN NaN NaN 95.297 0.80317 95.297 94.961 95.764 0 0 0 0 0.023327 1 57733 53.751 35.372 1 NaN NaN 0 9713000 9713000 0 5192 804 1935 1990 8168 8168 DLDVITIPSK 10 1 0 Unmodified _DLDVITIPSK_ 0 0 0 B0AZS5;O00139;B4DM85;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.3156 2 550.813522 1099.61249 NaN NaN NaN 0.1371 7.5515E-05 NaN NaN NaN NaN 94.598 0.75854 94.598 94.283 95.042 0 0 0 0 0.0040971 1 58630 73.985 59.318 1 NaN NaN 0 14930000 14930000 0 5193 804 1935 1990 8169 8169 DLDVITIPSK 10 1 0 Unmodified _DLDVITIPSK_ 0 0 0 B0AZS5;O00139;B4DM85;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.8138 2 550.813522 1099.61249 NaN NaN NaN 0.11022 6.0712E-05 NaN NaN NaN NaN 107.92 0.61457 107.92 107.67 108.29 0 0 0 0 0.028957 1 61057 52.278 52.278 1 NaN NaN 0 1025900 1025900 0 5194 804 1935 1990 8170 8170 DLEAEHVEVEDTTLNR 16 0 1 Unmodified _DLEAEHVEVEDTTLNR_ 0 0 0 A0A087WZT3;Q9H3K6;H3BV85;H3BTW0;A0A0B4J295;H3BVE0 A0A087WZT3 A0A087WZT3 BOLA2;BOLA2B BolA-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.302 3 623.965676 1868.8752 77176.84 0.67666 0.00042221 0.047323 2.9528E-05 0.72398 0.00045174 624.300504713668 627.301721447883 66.566 0.50035 66.566 66.329 66.829 0 123 41 5 0 0 0 4.734E-05 1 39262 75.018 75.018 1 3.8266 3.8338 0 18459000 3868800 14590000 5195 441 1936 1991 8171 8171 DLEAEHVEVEDTTLNR 16 0 1 Unmodified _DLEAEHVEVEDTTLNR_ 0 0 0 A0A087WZT3;Q9H3K6;H3BV85;H3BTW0;A0A0B4J295;H3BVE0 A0A087WZT3 A0A087WZT3 BOLA2;BOLA2B BolA-like protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 940.9507 2 935.444876 1868.8752 NaN NaN NaN -0.29433 -0.00027533 NaN NaN NaN NaN 66.594 0.39436 66.594 66.354 66.748 0 0 0 0 7.1595E-09 1 39310 101.39 89.857 1 NaN NaN 0 6260100 0 6260100 5196 441 1936 1991 8172 8172 DLEAHIDSANK 11 1 0 Unmodified _DLEAHIDSANK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.8035 2 606.796392 1211.57823 76399.08 0.54825 0.00033268 -0.49843 -0.00030244 0.049829 3.0236E-05 606.79621397265 610.803339154622 28.157 0.3022 28.157 28.025 28.328 0 49 13 8 0 0 0 5.1535E-41 1 13346 196.07 135.48 1 2.0101 2.3655 0 396440000 111970000 284460000 5197 81 1937 1992 8173 8173 DLEAHIDSANK 11 1 0 Unmodified _DLEAHIDSANK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.8037 2 606.796392 1211.57823 78070.36 0.21393 0.00012981 0.029394 1.7836E-05 0.24333 0.00014765 606.796395363392 610.803473815162 32.744 0.36321 32.744 32.573 32.936 0 98 17 8 0 0 0 5.8244E-10 1 14227 128.81 86.212 1 2.6978 2.2539 0 49770000 12912000 36858000 5198 81 1937 1992 8174 8174 DLEAHIDSANK 11 1 0 Unmodified _DLEAHIDSANK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.8036 2 606.796392 1211.57823 77609.55 0.40312 0.00024461 -0.15135 -9.1836E-05 0.25177 0.00015278 606.796098398603 610.803361243527 32.84 0.2989 32.84 32.694 32.993 0 62 12 8 0 0 0 3.9266E-32 1 13837 187.99 148.97 1 2.5901 2.1847 0 55009000 15057000 39952000 5199 81 1937 1992 8175 8175 DLEALLNSK 9 1 0 Unmodified _DLEALLNSK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.7841 2 501.776939 1001.53933 NaN NaN NaN -0.21538 -0.00010807 NaN NaN NaN NaN 92.171 0.81896 92.171 91.651 92.47 0 0 0 0 0.023349 1 55947 56.258 29.656 1 NaN NaN 0 25453000 0 25453000 5200 1440 1938 1993 8176 8176 DLEALLNSK 9 1 0 Unmodified _DLEALLNSK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.7839 2 501.776939 1001.53933 83964.38 0.36533 0.00018331 -0.33649 -0.00016884 0.028842 1.4472E-05 501.777100373379 505.783812443477 104.83 0.94599 104.83 104.38 105.33 0 193 55 7 0 0 0 0.023992 1 59632 54.982 28.598 1 1.522 1.2005 0 5463600 2358000 3105600 5201 1440 1938 1993 8177 8177 DLEALLNSK 9 1 0 Unmodified _DLEALLNSK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.7836 2 501.776939 1001.53933 84230.98 0.18379 9.222E-05 0.40062 0.00020102 0.58441 0.00029324 501.777347323791 505.784146381685 104.75 0.93993 104.75 104.3 105.24 0 177 56 6 0 0 0 0.021717 1 58739 56.258 24.969 1 1.4076 1.1501 0 8145500 3289400 4856100 5202 1440 1938 1993 8178 8178 DLEDGEVPQHAGK 13 1 0 Unmodified _DLEDGEVPQHAGK_ 0 0 0 A0A024R8H6;Q15059;A0A140F1N4 A0A024R8H6 A0A024R8H6 BRD3 Bromodomain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.8317 2 697.830963 1393.64737 73571.13 0.37487 0.0002616 -0.5016 -0.00035003 -0.12673 -8.8435E-05 697.830188672196 701.838011352943 26.693 0.24845 26.693 26.516 26.764 0 49 14 5 0 0 0 1.0736E-23 2 11997 157.24 152.55 1 0.56612 0.5867 0 12627000 9249500 3377500 5203 249 1939 1994 8179;8180 8179 DLEDGEVPQHAGK 13 1 0 Unmodified _DLEDGEVPQHAGK_ 0 0 0 A0A024R8H6;Q15059;A0A140F1N4 A0A024R8H6 A0A024R8H6 BRD3 Bromodomain-containing protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8309 2 697.830963 1393.64737 NaN NaN NaN -0.51355 -0.00035837 NaN NaN NaN NaN 26.216 0.26877 26.216 26.105 26.374 1.9073E-06 0 0 0 1.0245E-29 1 11700 154.24 124.77 1 NaN NaN 0 9054400 9054400 0 5204 249 1939 1994 8181 8181 DLEDGEVPQHAGK 13 1 0 Unmodified _DLEDGEVPQHAGK_ 0 0 0 A0A024R8H6;Q15059;A0A140F1N4 A0A024R8H6 A0A024R8H6 BRD3 Bromodomain-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.8315 2 697.830963 1393.64737 72866.46 0.39477 0.00027548 0.76913 0.00053672 1.1639 0.0008122 697.83130578389 701.838272839894 30.371 0.36879 30.371 30.136 30.505 -1.9073E-06 98 22 7 0 0 0 0.0098565 3 12546 42.336 42.336 1 1.2284 1.0182 0 2298000 993830 1304200 5205 249 1939 1994 8182;8183;8184 8183 DLEDLFYK 8 1 0 Unmodified _DLEDLFYK_ 0 0 0 Q13242;A8K3M9;H0YIB4;S4R3G0;B4DFT9 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.7585 2 521.758215 1041.50188 84985.05 0.53047 0.00027678 -0.29416 -0.00015348 0.23631 0.0001233 521.758105860736 525.765117554405 106.19 0.78706 106.19 105.79 106.58 0 199 56 5 0 0 0 0.0082133 2 65724 79.597 68.724 1 1.8593 1.8917 0 14020000 4322900 9696600 5206 1709 1940 1995 8185;8186 8186 DLEDLFYK 8 1 0 Unmodified _DLEDLFYK_ 0 0 0 Q13242;A8K3M9;H0YIB4;S4R3G0;B4DFT9 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.7579 2 521.758215 1041.50188 84785.94 0.44807 0.00023379 -0.233 -0.00012157 0.21507 0.00011222 521.757994350403 525.765078499056 105.56 0.7547 105.56 105.21 105.96 0 190 53 6 0 0 0 0.0052559 2 67121 91.041 72.31 1 1.8357 1.8324 0 14936000 6217600 8718800 5207 1709 1940 1995 8187;8188 8188 DLEDSLAR 8 0 1 Unmodified _DLEDSLAR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.7334 2 459.729989 917.445425 88980.44 0.043174 1.9849E-05 -0.3322 -0.00015272 -0.28903 -0.00013287 459.72969782424 464.733915542154 50.205 0.82825 50.205 49.809 50.637 -3.8147E-06 337 78 7 0 0 0 0.0092533 1 27571 75.109 35.006 1 1.218 1.3532 0 72513000 28579000 43934000 5208 1440 1941 1996 8189 8189 DLEDSLAR 8 0 1 Unmodified _DLEDSLAR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.7299 2 459.729989 917.445425 89310.67 0.11567 5.3178E-05 0.20362 9.3609E-05 0.31929 0.00014679 459.729972760654 464.734173219972 49.12 0.81248 49.12 48.775 49.588 0 290 68 6 0 0 0 0.022274 1 27523 57.281 24.81 1 1.1403 1.3171 0 70131000 30554000 39577000 5209 1440 1941 1996 8190 8190 DLEEALEMGVDWSLR 15 0 1 Oxidation (M) _DLEEALEM(ox)GVDWSLR_ DLEEALEM(1)GVDWSLR DLEEALEM(127.37)GVDWSLR 0 1 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 889.9169 2 889.916909 1777.81927 67588.89 0.94066 0.00083711 -0.42572 -0.00037886 0.51494 0.00045825 889.91650552911 894.920899134991 128.71 0.30371 128.71 128.49 128.79 0 67 17 6 0 0 0 2.1999E-15 1 83954 127.37 119.51 1 1.2467 1.3025 0 4806500 2082000 2724500 5210 2137 1942 1997 8191 8191 1971 DLEEALEMGVDWSLR 15 0 1 Oxidation (M) _DLEEALEM(ox)GVDWSLR_ DLEEALEM(1)GVDWSLR DLEEALEM(117.98)GVDWSLR 0 1 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 889.9195 2 889.916909 1777.81927 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.39 1 128.39 127.89 128.89 0 0 0 0 3.6112E-12 1 85818 117.98 102.44 1 5211 2137 1942 1997 8192 8192 1971 DLEEALEMGVDWSLR 15 0 1 Oxidation (M) _DLEEALEM(ox)GVDWSLR_ DLEEALEM(1)GVDWSLR DLEEALEM(103.88)GVDWSLR 0 1 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.9213 2 889.916909 1777.81927 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.66 1 128.66 128.16 129.16 0 0 0 0 1.227E-07 1 85984 103.88 86.445 1 5212 2137 1942 1997 8193 8193 1971 DLEEDHACIPIK 12 1 0 Unmodified _DLEEDHACIPIK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.8544 2 720.345391 1438.67623 71338.35 0.53685 0.00038672 -0.0016676 -1.2012E-06 0.53518 0.00038552 720.346133855226 724.35244890966 62.8 0.84223 62.8 62.542 63.385 -3.8147E-06 271 81 6 0 0 0 0.00024011 2 35932 86.898 81.992 1 4.944 5.3255 0 38023000 6559600 31463000 5213 1478 1943 1998 8194;8195 8195 DLEEDHACIPIK 12 1 0 Unmodified _DLEEDHACIPIK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.3535 2 720.345391 1438.67623 NaN NaN NaN 0.20239 0.00014579 NaN NaN NaN NaN 61.444 0.088108 61.444 61.402 61.49 0 0 0 0 0.019874 1 36015 51.276 33.84 1 NaN NaN 0 3150400 0 3150400 5214 1478 1943 1998 8196 8196 DLEEDHACIPIK 12 1 0 Unmodified _DLEEDHACIPIK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 724.3544 2 720.345391 1438.67623 NaN NaN NaN -0.53693 -0.00038678 NaN NaN NaN NaN 72.397 0.68618 72.397 72.147 72.834 0 0 0 0 0.0023768 1 38109 67.726 54.372 1 NaN NaN 0 2871400 0 2871400 5215 1478 1943 1998 8197 8197 DLEEFFSTVGK 11 1 0 Unmodified _DLEEFFSTVGK_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;H0Y4X3;Q5QP23;Q5QP22 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.3192 2 636.311343 1270.60813 77782.63 0.6573 0.00041824 0.34048 0.00021665 0.99778 0.0006349 636.311534903738 640.318567058715 115.41 0.77097 115.41 115.08 115.85 7.6294E-06 262 52 7 0 0 0 2.7321E-06 2 73529 111.65 82.565 1 0.99845 0.98044 0 23119000 12034000 11084000 5216 588 1944 1999 8198;8199 8199 DLEEFFSTVGK 11 1 0 Unmodified _DLEEFFSTVGK_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;H0Y4X3;Q5QP23;Q5QP22 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.311 2 636.311343 1270.60813 77797.89 0.75351 0.00047947 0.33767 0.00021486 1.0912 0.00069433 636.311462253293 640.31851803284 114.9 0.67651 114.9 114.61 115.29 7.6294E-06 212 43 6 0 0 0 2.7321E-06 2 74730 111.65 82.565 1 1.0003 1.0095 0 28342000 12948000 15393000 5217 588 1944 1999 8200;8201 8201 DLEEFFSTVGK 11 1 0 Unmodified _DLEEFFSTVGK_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;H0Y4X3;Q5QP23;Q5QP22 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3185 2 636.311343 1270.60813 77523.66 0.78144 0.00049724 0.15902 0.00010119 0.94046 0.00059842 636.311392076506 640.318459250276 126.55 0.74727 126.55 126.24 126.98 0 152 27 8 0 0 0 0.0012566 2 76049 68.893 49.106 1 0.62022 0.49063 0 5064900 3086100 1978800 5218 588 1944 1999 8202;8203 8203 DLEEFFSTVGK 11 1 0 Unmodified _DLEEFFSTVGK_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;H0Y4X3;Q5QP23;Q5QP22 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.3182 2 636.311343 1270.60813 77744.73 0.65582 0.00041731 0.096582 6.1456E-05 0.7524 0.00047876 636.311350460462 640.318348302937 126.44 0.76933 126.44 126.12 126.89 0 156 33 7 0 0 0 0.0017859 1 75039 64.841 35.754 1 0.57867 0.47479 0 5283700 3069800 2213800 5219 588 1944 1999 8204 8204 DLEGAVSR 8 0 1 Unmodified _DLEGAVSR_ 0 0 0 Q9H307;A8K964;G3V5F0;G3V579 Q9H307 Q9H307 PNN Pinin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 428.7234 2 423.719424 845.424296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.679 1 29.679 29.179 30.179 0 0 0 0 0.011377 1 14415 75.109 20.584 1 5220 2028 1945 2000 8205 8205 DLEGENIEIVFAKPPDQK 18 2 0 Unmodified _DLEGENIEIVFAKPPDQK_ 0 0 1 Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645;B7Z213 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.0287 3 681.352872 2041.03679 75598.88 0.81134 0.00055281 -0.17221 -0.00011733 0.63913 0.00043548 681.68732975972 686.69521488411 102.24 0.60033 102.24 101.96 102.56 7.6294E-06 173 48 6 0 0 0 0.0038869 1 62861 30.684 30.684 1 1.3294 1.5702 0 15224000 10395000 4828900 5221 864 1946 2001 8206 8206 DLEGENIEIVFAKPPDQK 18 2 0 Unmodified _DLEGENIEIVFAKPPDQK_ 0 0 1 Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645;B7Z213 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.0317 3 681.352872 2041.03679 72458.77 0.66207 0.00045111 -0.0024277 -1.6541E-06 0.65965 0.00044945 681.687561397677 687.029905968993 101.57 0.5815 101.57 101.33 101.91 7.6294E-06 177 46 6 0 0 0 0.0001443 2 63887 46.663 46.663 1 1.2785 1.4605 0 14585000 5955400 8629400 5222 864 1946 2001 8207;8208 8207 DLEGLSQR 8 0 1 Unmodified _DLEGLSQR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2421 2 459.237981 916.461409 NaN NaN NaN -0.1762 -8.092E-05 NaN NaN NaN NaN 37.677 1.0201 37.677 37.225 38.245 0 0 0 0 0.021837 1 19528 64.265 22.762 1 NaN NaN 0 58942000 0 58942000 5223 81 1947 2002 8209 8209 DLEGLSQR 8 0 1 Unmodified _DLEGLSQR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.2416 2 459.237981 916.461409 89849.55 0.27897 0.00012811 -0.1874 -8.6061E-05 0.091571 4.2053E-05 459.237944443043 464.241921412064 43.542 1.0099 43.542 43.075 44.085 0 266 69 6 0 0 0 0.029249 1 20433 52.716 20.246 1 2.5257 2.1735 0 7136900 1911400 5225400 5224 81 1947 2002 8210 8210 DLEGLSQR 8 0 1 Unmodified _DLEGLSQR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 459.2379 2 459.237981 916.461409 89319.89 -0.004983 -2.2884E-06 -0.051316 -2.3566E-05 -0.056299 -2.5855E-05 459.238009336548 464.242025280872 43.602 0.9621 43.602 43.127 44.089 0 259 61 6 0 0 0 0.049834 1 19974 43.808 43.808 1 2.6331 2.1889 0 6014900 1613300 4401500 5225 81 1947 2002 8211 8211 DLEGSDIDTR 10 0 1 Unmodified _DLEGSDIDTR_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DM67 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.7599 2 560.759475 1119.5044 NaN NaN NaN 1.1158 0.00062572 NaN NaN NaN NaN 35.756 0.35521 35.756 35.621 35.976 0 0 0 0 0.010843 1 18241 62.463 39.144 1 NaN NaN 0 2709800 2709800 0 5226 1037 1948 2003 8212 8212 DLEHPLLPDGILEIPK 16 1 0 Unmodified _DLEHPLLPDGILEIPK_ 0 0 0 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 A0A0A0MSU3 RMI1 RecQ-mediated genome instability protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.3362 3 600.336493 1797.98765 NaN NaN NaN -0.17378 -0.00010433 NaN NaN NaN NaN 122.23 0.37981 122.23 122.1 122.48 0 0 0 0 0.01866 1 79086 31.876 21.241 1 NaN NaN 0 2474700 2474700 0 5227 481 1949 2004 8213 8213 DLEHPLLPDGILEIPK 16 1 0 Unmodified _DLEHPLLPDGILEIPK_ 0 0 0 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 A0A0A0MSU3 RMI1 RecQ-mediated genome instability protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.6708 3 600.336493 1797.98765 82706.48 0.66146 0.0003971 -0.080179 -4.8134E-05 0.58128 0.00034896 600.670579419473 603.008074295567 121.7 0.34805 121.7 121.59 121.93 0 85 24 5 0 0 0 0.00011198 3 80603 52.254 52.254 1 0.40255 0.40835 0 5266000 3620500 1645500 5228 481 1949 2004 8214;8215;8216 8215 DLEHPLLPDGILEIPK 16 1 0 Unmodified _DLEHPLLPDGILEIPK_ 0 0 0 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 A0A0A0MSU3 RMI1 RecQ-mediated genome instability protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 600.3373 3 600.336493 1797.98765 NaN NaN NaN -0.59925 -0.00035975 NaN NaN NaN NaN 134.17 0.16345 134.17 134.08 134.25 0 0 0 0 0.051923 1 81854 24.481 18.576 1 NaN NaN 0 352700 352700 0 5229 481 1949 2004 8217 8217 DLELEMGDDYILDLQK 16 1 0 Oxidation (M) _DLELEM(ox)GDDYILDLQK_ DLELEM(1)GDDYILDLQK DLELEM(146.07)GDDYILDLQK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 963.4539 2 963.456064 1924.89757 61532.45 0.27076 0.00026087 0.36411 0.00035081 0.63487 0.00061167 963.958014400332 967.965249084808 117.54 0.74597 117.54 117.2 117.94 0 366 49 10 0 0 0 3.1572E-25 2 75111 146.07 146.07 1 1.4902 1.685 0 104060000 41485000 62577000 5230 1183 1950 2005 8218;8219 8218 894 DLELEMGDDYILDLQK 16 1 0 Oxidation (M) _DLELEM(ox)GDDYILDLQK_ DLELEM(1)GDDYILDLQK DLELEM(108.59)GDDYILDLQK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 967.9652 2 963.456064 1924.89757 61805.18 0.45122 0.00043473 0.14001 0.00013489 0.59123 0.00056962 963.456052643187 967.463285806693 117.13 0.78151 117.13 116.87 117.65 0 350 46 11 0 0 0 3.4876E-09 2 76732 108.59 108.59 1 1.452 1.6322 0 118600000 46258000 72347000 5231 1183 1950 2005 8220;8221 8221 894 DLELEMGDDYILDLQK 16 1 0 Oxidation (M) _DLELEM(ox)GDDYILDLQK_ DLELEM(1)GDDYILDLQK DLELEM(110.8)GDDYILDLQK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 967.9659 2 963.456064 1924.89757 NaN NaN NaN 0.12901 0.0001243 NaN NaN NaN NaN 129.23 0.52829 129.23 129.07 129.6 0 0 0 0 4.4363E-13 1 77178 110.8 87.196 1 NaN NaN 0 10397000 0 10397000 5232 1183 1950 2005 8222 8222 894 DLENGSHIR 9 0 1 Unmodified _DLENGSHIR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.7638 2 520.759612 1039.50467 83178.77 0.39259 0.00020444 0.024747 1.2887E-05 0.41733 0.00021733 520.759876709395 525.763674519241 20.064 0.31747 20.064 19.859 20.176 0 21 8 5 0 0 0 0.024033 1 6578 47.082 21.188 1 1.0681 1.1024 0 24034000 11705000 12329000 5233 568 1951 2006 8223 8223 DLENGSHIR 9 0 1 Unmodified _DLENGSHIR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.7594 2 520.759612 1039.50467 85095.25 -0.11792 -6.1409E-05 0.64847 0.0003377 0.53055 0.00027629 520.759583984658 525.764310995158 21.358 0.29714 21.358 21.178 21.475 0 32 11 6 0 0 0 0.042514 1 6439 41.029 15.292 1 0.65043 0.56457 0 2169200 1280300 888910 5234 568 1951 2006 8224 8224 DLENLGLTHLIGSPFLR 17 0 1 Unmodified _DLENLGLTHLIGSPFLR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.6874 3 632.351026 1894.03125 75476.5 0.789 0.00049892 0.0055531 3.5115E-06 0.79455 0.00050244 632.685407359688 635.686968584791 127.94 1.454 127.94 127.13 128.58 0 618 94 10 0 0 0 2.2684E-10 2 83438 101.96 101.96 1 0.99995 1.0968 0 53498000 27431000 26067000 5235 2000 1952 2007 8225;8226 8226 DLENLGLTHLIGSPFLR 17 0 1 Unmodified _DLENLGLTHLIGSPFLR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 948.5266 2 948.0229 1894.03125 NaN NaN NaN 0.012024 1.1399E-05 NaN NaN NaN NaN 127.92 0.66096 127.92 127.56 128.22 0 0 0 0 0.0010368 1 83366 61.212 51.557 1 NaN NaN 0 6336500 6336500 0 5236 2000 1952 2007 8227 8227 DLENLGLTHLIGSPFLR 17 0 1 Unmodified _DLENLGLTHLIGSPFLR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.6874 3 632.351026 1894.03125 75435.85 1.1143 0.00070466 -1.1979 -0.00075748 -0.083533 -5.2822E-05 632.350208861275 636.021155857757 127.3 0.20224 127.3 127.13 127.33 -7.6294E-06 22 10 4 0 0 0 0.01703 1 82854 33.697 24.292 1 1.133 1.2195 0 3233900 1554300 1679600 5237 2000 1952 2007 8228 8228 DLENLGLTHLIGSPFLR 17 0 1 Unmodified _DLENLGLTHLIGSPFLR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.6875 3 632.351026 1894.03125 74777.79 0.83792 0.00052986 -0.21024 -0.00013294 0.62768 0.00039691 632.685291781777 635.686934817582 127.41 1.6547 127.41 126.59 128.24 0 644 102 10 0 0 0 6.046E-10 5 85090 104.44 104.44 1 0.9309 1.0719 0 73941000 36568000 37373000 5238 2000 1952 2007 8229;8230;8231;8232;8233 8232 DLENLGLTHLIGSPFLR 17 0 1 Unmodified _DLENLGLTHLIGSPFLR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 948.5239 2 948.0229 1894.03125 63126.44 0.76144 0.00072186 0.19617 0.00018598 0.95761 0.00090784 948.52395335477 953.528580788422 127.39 0.80132 127.39 126.94 127.74 0 245 48 7 0 0 0 0.00046639 1 85009 64.104 64.104 1 0.94534 0.93249 0 12938000 7061500 5876100 5239 2000 1952 2007 8234 8234 DLENLGLTHLIGSPFLR 17 0 1 Unmodified _DLENLGLTHLIGSPFLR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.0222 3 632.351026 1894.03125 75142.01 0.68399 0.00043252 0.36721 0.0002322 1.0512 0.00066472 632.351360106613 635.687193317628 134.68 0.24834 134.68 134.5 134.75 0 28 6 7 0 0 0 3.1483E-07 2 82351 75.682 75.682 1 1.1921 1.0288 0 84329000 33638000 50691000 5240 2000 1952 2007 8235;8236 8236 DLEQGDVSETIR 12 0 1 Unmodified _DLEQGDVSETIR_ 0 0 0 P49916;B7Z6I3;K7ERZ5;K7EQB6 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3351 2 681.330795 1360.64704 73239.96 0.46471 0.00031662 0.076612 5.2198E-05 0.54132 0.00036882 681.330975025028 686.334800231138 56.263 0.59759 56.263 55.888 56.485 -3.8147E-06 223 46 7 0 0 0 6.809E-09 2 32313 123.79 107.91 1 0.52441 0.5737 0 34121000 21530000 12591000 5241 1589 1953 2008 8237;8238 8238 DLESLFHR 8 0 1 Unmodified _DLESLFHR_ 0 0 0 Q03252 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.8025 2 508.761623 1015.50869 87502.16 0.59019 0.00030026 -0.27495 -0.00013988 0.31524 0.00016038 508.761512745764 513.765778214573 79.821 0.59713 79.821 79.477 80.075 0 185 46 5 0 0 0 0.054216 1 48517 105.12 56.613 1 1.319 1.3201 0 17074000 7298900 9774900 5242 1682 1954 2009 8239 8239 DLETDEVEEFLENK 14 1 0 Unmodified _DLETDEVEEFLENK_ 0 0 0 A8K4Q6;O14867;C9JMP6;C9IYR0 A8K4Q6 A8K4Q6 BACH1 Transcription regulator protein BACH1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 859.9018 2 855.391247 1708.76794 68674.52 0.78115 0.00066819 -0.22346 -0.00019115 0.55769 0.00047704 855.391054947936 859.397961579471 117.75 0.38301 117.75 117.55 117.93 0 99 24 6 0 0 0 7.4152E-05 2 75351 89.403 83.863 1 1.6765 1.7022 0 6161400 2066800 4094600 5243 739 1955 2010 8240;8241 8240 DLETDEVEEFLENK 14 1 0 Unmodified _DLETDEVEEFLENK_ 0 0 0 A8K4Q6;O14867;C9JMP6;C9IYR0 A8K4Q6 A8K4Q6 BACH1 Transcription regulator protein BACH1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.3915 2 855.391247 1708.76794 69076.42 0.62774 0.00053696 0.084017 7.1867E-05 0.71176 0.00060883 855.390131416785 859.398444903956 117.39 0.42016 117.39 117.18 117.6 0 88 24 6 0 0 0 7.4152E-05 2 76875 89.403 76.05 1 1.7451 1.7627 0 8393900 3366500 5027300 5244 739 1955 2010 8242;8243 8243 DLETDEVEEFLENK 14 1 0 Unmodified _DLETDEVEEFLENK_ 0 0 0 A8K4Q6;O14867;C9JMP6;C9IYR0 A8K4Q6 A8K4Q6 BACH1 Transcription regulator protein BACH1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.3996 2 855.391247 1708.76794 NaN NaN NaN 0.18268 0.00015626 NaN NaN NaN NaN 129.89 0.6937 129.89 129.62 130.32 0 0 0 0 0.050358 1 78565 38.634 22.744 1 NaN NaN 0 1722300 0 1722300 5245 739 1955 2010 8244 8244 DLEWVER 7 0 1 Unmodified _DLEWVER_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.7349 2 473.735074 945.455596 89294.25 0.31881 0.00015103 0.10121 4.7945E-05 0.42001 0.00019898 473.734946113873 478.739178721083 80.607 1.2345 80.607 80.112 81.346 0 264 80 5 0 0 0 0.051136 1 42599 54.549 42.06 1 1.0361 0.86886 0 4868500 2429300 2439200 5246 1316 1956 2011 8245 8245 DLFDLILTCEER 12 0 1 Unmodified _DLFDLILTCEER_ 0 0 0 B4DMK6;Q9NP77 B4DMK6 B4DMK6 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.3794 2 762.374149 1522.73374 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.27 1 133.27 132.77 133.77 0 0 0 0 0.0027351 1 87222 67.726 48.946 1 5247 1006 1957 2012 8246 8246 DLFDLILTCEER 12 0 1 Unmodified _DLFDLILTCEER_ 0 0 0 B4DMK6;Q9NP77 B4DMK6 B4DMK6 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.881 2 762.374149 1522.73374 NaN NaN NaN 0.53674 0.0004092 NaN NaN NaN NaN 132.93 0.33688 132.93 132.77 133.11 0 0 0 0 0.00088271 1 89227 84.17 67.596 1 NaN NaN 0 1921900 0 1921900 5248 1006 1957 2012 8247 8247 DLFDLNSSEEDDTEGFSER 19 0 1 Unmodified _DLFDLNSSEEDDTEGFSER_ 0 0 0 Q9Y3T9;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1108.4662 2 1102.95874 2203.90293 NaN NaN NaN 0.40653 0.00044838 NaN NaN NaN NaN 109.58 0.32204 109.58 109.48 109.8 0 0 0 0 0.0018543 1 68594 50.155 45.172 1 NaN NaN 0 6394500 0 6394500 5249 2139 1958 2013 8248 8248 DLFDPIIEDR 10 0 1 Unmodified _DLFDPIIEDR_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;G3V4N7;G3V461 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8157 2 616.81151 1231.60847 77405.05 0.87228 0.00053803 -0.10308 -6.3583E-05 0.7692 0.00047445 616.811384670828 621.815396307971 112.25 0.63206 112.25 111.94 112.57 -7.6294E-06 145 43 5 0 0 0 0.002232 2 70662 70.028 70.028 1 4.715 4.9517 0 11771000 2429700 9341400 5250 557 1959 2014 8249;8250 8249 DLFDPIIEDR 10 0 1 Unmodified _DLFDPIIEDR_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;G3V4N7;G3V461 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.8156 2 616.81151 1231.60847 NaN NaN NaN 0.055176 3.4033E-05 NaN NaN NaN NaN 111.73 0.64436 111.73 111.4 112.04 0 0 0 0 0.0023914 1 72051 80.755 80.755 1 NaN NaN 0 10924000 0 10924000 5251 557 1959 2014 8251 8251 DLFDPIIEDR 10 0 1 Unmodified _DLFDPIIEDR_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;G3V4N7;G3V461 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8121 2 616.81151 1231.60847 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.63 1 111.63 111.13 112.13 0 0 0 0 0.00325 1 72089 66.435 44.287 1 5252 557 1959 2014 8252 8252 DLFDPIIEDR 10 0 1 Unmodified _DLFDPIIEDR_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;G3V4N7;G3V461 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8121 2 616.81151 1231.60847 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.74 1 111.74 111.24 112.24 -7.6294E-06 0 0 0 0.050433 1 72182 44.309 22.161 1 5253 557 1959 2014 8253 8253 DLFEQALDGCPPK 13 1 0 Unmodified _DLFEQALDGCPPK_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.3594 2 745.353216 1488.69188 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.72 1 100.72 100.22 101.22 0 0 0 0 0.0091824 1 61784 54.784 37.553 1 5254 1838 1960 2015 8254 8254 DLFNVDAFK 9 1 0 Unmodified _DLFNVDAFK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.7783 2 534.771657 1067.52876 85015.88 0.41718 0.0002231 0.22494 0.00012029 0.64212 0.00034339 534.771721895814 538.778794160267 109.81 0.57294 109.81 109.53 110.1 0 146 42 4 0 0 0 0.0035543 2 68688 71.501 55.357 1 0.79578 0.83589 0 15301000 8249900 7051100 5255 696 1961 2016 8255;8256 8256 DLFNVDAFK 9 1 0 Unmodified _DLFNVDAFK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.7792 2 534.771657 1067.52876 84428.94 0.65706 0.00035138 0.012585 6.7301E-06 0.66965 0.00035811 534.771502048273 538.77867174437 109.28 0.63541 109.28 108.98 109.62 0 142 44 5 0 0 0 0.0070864 2 69995 71.501 53.177 1 0.86739 0.86714 0 14080000 6601600 7478300 5256 696 1961 2016 8257;8258 8258 DLFNVDAFK 9 1 0 Unmodified _DLFNVDAFK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.7791 2 534.771657 1067.52876 84254.52 0.7307 0.00039076 -0.23024 -0.00012312 0.50047 0.00026764 534.771427364595 538.778624642749 120.54 0.51228 120.54 120.34 120.85 0 117 27 6 0 0 0 0.049868 1 70619 38.086 31.915 1 1.0251 0.80632 0 3275200 1862600 1412600 5257 696 1961 2016 8259 8259 DLFQVAFNR 9 0 1 Unmodified _DLFQVAFNR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.7964 2 555.290548 1108.56654 84821.56 0.72883 0.00040471 0.079092 4.3919E-05 0.80793 0.00044863 555.290358980474 560.796455123456 107.61 0.57896 107.61 107.31 107.89 0 69 42 4 0 0 0 0.029116 1 67051 56.547 56.547 1 1.6044 1.6771 0 4741900 1847000 2894800 5258 1729 1962 2017 8260 8260 DLFTASNDPLLWR 13 0 1 Unmodified _DLFTASNDPLLWR_ 0 0 0 Q5HYB3;A8K7F7;Q9Y3I1 Q5HYB3 Q5HYB3 DKFZp686B08113;FBXO7 F-box only protein 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.3959 2 774.396273 1546.77799 NaN NaN NaN -1.1467 -0.00088802 NaN NaN NaN NaN 123.69 0.47713 123.69 123.39 123.87 0 0 0 0 0.051482 1 80121 39.918 26.148 1 NaN NaN 0 2461300 2461300 0 5259 771 1963 2018 8261 8261 DLFTASNDPLLWR 13 0 1 Unmodified _DLFTASNDPLLWR_ 0 0 0 Q5HYB3;A8K7F7;Q9Y3I1 Q5HYB3 Q5HYB3 DKFZp686B08113;FBXO7 F-box only protein 7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.4016 2 774.396273 1546.77799 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.26 1 123.26 122.76 123.76 0 0 0 0 0.020015 1 81845 47.559 14.33 1 5260 771 1963 2018 8262 8262 DLGALTPDER 10 0 1 Unmodified _DLGALTPDER_ 0 0 0 Q6P158;Q59G60;H7C109 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.7791 2 543.774928 1085.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.153 1 60.153 59.653 60.653 0 0 0 0 0.00043658 1 34318 73.233 45.979 1 5261 1850 1964 2019 8263 8263 DLGDLCGPYYPEHCLPK 17 1 0 Unmodified _DLGDLCGPYYPEHCLPK_ 0 0 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.6464 3 678.641371 2032.90228 74893.97 0.43849 0.00029758 -0.2574 -0.00017468 0.1811 0.0001229 678.975508060083 681.647079294454 103.09 0.31668 103.09 102.92 103.24 7.6294E-06 60 21 4 0 0 0 0.0051126 1 57677 27.514 24.021 1 0.94646 0.75458 0 3091900 1898000 1194000 5262 1879 1965 2020 8264 8264 DLGEEHFK 8 1 0 Unmodified _DLGEEHFK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.7328 2 487.732532 973.45051 NaN NaN NaN 0.14764 7.2011E-05 NaN NaN NaN NaN 27.49 0.45033 27.49 27.295 27.746 1.9073E-06 0 0 0 0.012137 1 12676 74.127 38.247 1 NaN NaN 0 11343000 11343000 0 + 5263 1153 1966 2021 8265 8265 DLGEEHFK 8 1 0 Unmodified _DLGEEHFK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.7327 2 487.732532 973.45051 NaN NaN NaN 0.038014 1.8541E-05 NaN NaN NaN NaN 26.951 0.40946 26.951 26.723 27.132 0 0 0 0 0.013769 1 12284 71.501 41.316 1 NaN NaN 0 25852000 25852000 0 + 5264 1153 1966 2021 8266 8266 DLGEELEALK 10 1 0 Unmodified _DLGEELEALK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0 A0A024R1N1 A0A024R1N1 MYH9;MYH11 Myosin-9;Myosin-11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.7997 2 558.792786 1115.57102 81271.43 0.50835 0.00028406 0.22173 0.0001239 0.73008 0.00040796 558.792570756558 562.799824905248 99.399 1.0128 99.399 99.006 100.02 0 369 85 7 0 0 0 0.003049 2 60702 66.299 64.04 1 1.6104 1.77 0 54217000 20710000 33506000 5265 81 1967 2022 8267;8268 8267 DLGEELEALK 10 1 0 Unmodified _DLGEELEALK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0 A0A024R1N1 A0A024R1N1 MYH9;MYH11 Myosin-9;Myosin-11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.7925 2 558.792786 1115.57102 80585.53 0.72734 0.00040643 0.12001 6.7059E-05 0.84734 0.00047349 558.792594312487 562.799898800055 98.772 1.0166 98.772 98.36 99.377 0 402 85 6 0 0 0 0.00045007 1 61801 86.67 61.533 1 1.7087 1.924 0 69771000 23257000 46514000 5266 81 1967 2022 8269 8269 DLGEELEALK 10 1 0 Unmodified _DLGEELEALK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0 A0A024R1N1 A0A024R1N1 MYH9;MYH11 Myosin-9;Myosin-11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.7926 2 558.792786 1115.57102 82170.77 0.86951 0.00048588 -0.1292 -7.2195E-05 0.74031 0.00041368 558.792603948614 562.799737515555 112.12 0.7738 112.12 111.78 112.56 0 209 46 7 0 0 0 0.040524 1 65025 38.567 30.918 1 2.826 2.2011 0 15667000 3831800 11835000 5267 81 1967 2022 8270 8270 DLGEELEALK 10 1 0 Unmodified _DLGEELEALK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0 A0A024R1N1 A0A024R1N1 MYH9;MYH11 Myosin-9;Myosin-11 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.7933 2 558.792786 1115.57102 NaN NaN NaN -0.020591 -1.1506E-05 NaN NaN NaN NaN 112.14 0.55341 112.14 111.89 112.44 0 0 0 0 0.0095327 1 64207 63.816 63.816 1 NaN NaN 0 5372400 5372400 0 5268 81 1967 2022 8271 8271 DLGEELEALK 10 1 0 Unmodified _DLGEELEALK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0 A0A024R1N1 A0A024R1N1 MYH9;MYH11 Myosin-9;Myosin-11 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.8004 2 558.792786 1115.57102 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.94 1 111.94 111.44 112.44 0 0 0 0 0.00032481 1 64029 76.1 46.938 1 5269 81 1967 2022 8272 8272 DLGFNGAPYR 10 0 1 Unmodified _DLGFNGAPYR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.2766 2 555.272355 1108.53016 NaN NaN NaN 0.028645 1.5906E-05 NaN NaN NaN NaN 71.369 1.1866 71.369 70.766 71.953 0 0 0 0 2.9156E-11 1 41470 122.74 96.848 1 NaN NaN 0 51771000 0 51771000 5270 2148 1968 2023 8273 8273 DLGFNGAPYR 10 0 1 Unmodified _DLGFNGAPYR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.2735 2 555.272355 1108.53016 NaN NaN NaN 0.56004 0.00031097 NaN NaN NaN NaN 70.064 0.44987 70.064 69.764 70.213 0 0 0 0 4.5217E-05 1 41670 101.6 78.581 1 NaN NaN 0 38146000 38146000 0 5271 2148 1968 2023 8274 8274 DLGFNGAPYR 10 0 1 Unmodified _DLGFNGAPYR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.2771 2 555.272355 1108.53016 NaN NaN NaN -0.045678 -2.5364E-05 NaN NaN NaN NaN 70.178 1.1561 70.178 69.774 70.93 -7.6294E-06 0 0 0 0.0001114 1 41807 95.605 69.869 1 NaN NaN 0 50813000 0 50813000 5272 2148 1968 2023 8275 8275 DLGFNGAPYR 10 0 1 Unmodified _DLGFNGAPYR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.2742 2 555.272355 1108.53016 NaN NaN NaN 0.85908 0.00047702 NaN NaN NaN NaN 70.583 0.55646 70.583 70.471 71.028 0 0 0 0 0.00012578 1 42236 94.302 72.171 1 NaN NaN 0 35008000 35008000 0 5273 2148 1968 2023 8276 8276 DLGFNGAPYR 10 0 1 Unmodified _DLGFNGAPYR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.272 2 555.272355 1108.53016 NaN NaN NaN 1.1083 0.00061542 NaN NaN NaN NaN 81.271 0.40605 81.271 81.2 81.606 0 0 0 0 0.016086 1 44034 57.047 40.507 1 NaN NaN 0 2340500 2340500 0 5274 2148 1968 2023 8277 8277 DLGFNGAPYR 10 0 1 Unmodified _DLGFNGAPYR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.2769 2 555.272355 1108.53016 NaN NaN NaN 1.0134 0.0005627 NaN NaN NaN NaN 81.305 0.9315 81.305 81.011 81.943 7.6294E-06 0 0 0 0.006286 1 43163 67.169 45.038 1 NaN NaN 0 6092100 0 6092100 5275 2148 1968 2023 8278 8278 DLGLAFEIPPHMK 13 1 0 Oxidation (M) _DLGLAFEIPPHM(ox)K_ DLGLAFEIPPHM(1)K DLGLAFEIPPHM(79.97)K 0 1 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.3912 2 742.384319 1482.75409 NaN NaN NaN 0.95777 0.00071104 NaN NaN NaN NaN 98.689 0.28175 98.689 98.534 98.816 0 0 0 0 0.00022534 1 60278 79.974 53.931 1 NaN NaN 0 6517800 0 6517800 5276 452 1969 2024 8279 8279 316 DLGLAFEIPPHMK 13 1 0 Oxidation (M) _DLGLAFEIPPHM(ox)K_ DLGLAFEIPPHM(1)K DLGLAFEIPPHM(95.57)K 0 1 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.392 2 742.384319 1482.75409 NaN NaN NaN -0.15102 -0.00011212 NaN NaN NaN NaN 98.019 0.28424 98.019 97.863 98.147 0 0 0 0 4.3051E-06 1 61218 95.573 61.707 1 NaN NaN 0 6241400 0 6241400 5277 452 1969 2024 8280 8280 316 DLGLAFEIPPHMK 13 1 0 Oxidation (M) _DLGLAFEIPPHM(ox)K_ DLGLAFEIPPHM(1)K DLGLAFEIPPHM(51.45)K 0 1 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.3925 2 742.384319 1482.75409 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.294 1 98.294 97.794 98.794 0 0 0 0 0.0065065 1 61481 51.445 30.073 1 5278 452 1969 2024 8281 8281 316 DLGVLDVIFHPTQPWVFSSGADGTVR 26 0 1 Unmodified _DLGVLDVIFHPTQPWVFSSGADGTVR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 938.4521 3 938.480086 2812.41843 62651.34 0.36616 0.00034364 -0.039629 -3.7191E-05 0.32654 0.00030645 938.815283519874 942.150838998384 133.59 0.32153 133.59 133.32 133.64 0 18 7 7 0 0 0 1.3201E-37 1 87562 137.24 130.44 1 NaN NaN 0 28226000 16373000 11853000 5279 1726 1970 2025 8282 8282 DLGVTDVLCEACDQLGWTK 19 1 0 Unmodified _DLGVTDVLCEACDQLGWTK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1090.4982 2 1090.50355 2178.99255 58075.86 -0.0093695 -1.0218E-05 -0.22189 -0.00024197 -0.23126 -0.00025219 1091.00461024516 1094.51090629641 128.47 0.47171 128.47 128.3 128.77 0 176 31 9 0 0 0 1.2371E-16 1 83727 115.8 115.8 1 0.96097 0.97831 0 14135000 8315600 5819900 5280 313 1971 2026 8283 8283 DLGVTDVLCEACDQLGWTK 19 1 0 Unmodified _DLGVTDVLCEACDQLGWTK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1091.0017 2 1090.50355 2178.99255 58801.51 0.34783 0.00037931 -0.48104 -0.00052458 -0.13321 -0.00014527 1090.50324781597 1095.01257919657 128.3 0.41298 128.3 128.05 128.46 0 128 25 7 0 0 0 4.6032E-06 2 85639 80.96 80.96 1 0.88623 0.91583 0 18464000 12842000 5622800 5281 313 1971 2026 8284;8285 8284 DLGVTDVLCEACDQLGWTKPTK 22 2 0 Unmodified _DLGVTDVLCEACDQLGWTKPTK_ 0 0 1 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 841.4137 3 836.06993 2505.18796 65060.13 0.89401 0.00074746 -0.76117 -0.00063639 0.13284 0.00011106 836.069548014432 841.412404853994 132.19 0.70438 132.19 131.91 132.61 0 168 32 11 0 0 0 6.7102E-09 2 80305 76.186 76.186 1 1.308 1.1172 0 14226000 6105800 8119800 5282 313 1972 2027 8286;8287 8286 DLGVTDVLCEACDQLGWTKPTK 22 2 0 Unmodified _DLGVTDVLCEACDQLGWTKPTK_ 0 0 1 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 841.75 3 836.06993 2505.18796 65610.59 1.1057 0.0009244 -0.21153 -0.00017685 0.89412 0.00074755 836.404154808068 841.747248646001 131.97 0.66399 131.97 131.56 132.23 1.5259E-05 139 27 9 0 0 0 1.7071E-29 2 79226 132.48 132.48 1 1.3869 1.1759 0 19686000 8241300 11445000 5283 313 1972 2027 8288;8289 8288 DLHTTAFK 8 1 0 Unmodified _DLHTTAFK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.7531 2 466.745442 931.476331 89047.26 0.5316 0.00024812 -0.3521 -0.00016434 0.1795 8.3783E-05 466.74517400443 470.752287755403 28.56 0.42879 28.56 28.331 28.759 0 76 26 4 0 0 0 0.0015831 1 13499 107.66 80.14 1 0.68653 0.73941 0 38069000 22008000 16060000 5284 1699 1973 2028 8290 8290 DLHTTAFK 8 1 0 Unmodified _DLHTTAFK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.7526 2 466.745442 931.476331 91043.02 0.18585 8.6743E-05 -0.0099217 -4.6309E-06 0.17592 8.2112E-05 466.745288010385 470.752492526601 27.834 0.4011 27.834 27.609 28.01 0 80 22 6 0 0 0 0.032325 1 13102 50.703 32.855 1 0.81919 0.88729 0 38830000 21251000 17579000 5285 1699 1973 2028 8291 8291 DLHTTAFK 8 1 0 Unmodified _DLHTTAFK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.7523 2 466.745442 931.476331 NaN NaN NaN 0.31561 0.00014731 NaN NaN NaN NaN 31.731 0.38474 31.731 31.542 31.926 0 0 0 0 0.030786 1 13453 58.782 40.746 1 NaN NaN 0 1761400 0 1761400 5286 1699 1973 2028 8292 8292 DLIDEGHAATQLVNQLHDVVVENNLSDK 28 1 0 Unmodified _DLIDEGHAATQLVNQLHDVVVENNLSDK_ 0 0 0 P35249;H7C1P0 P35249 P35249 RFC4 Replication factor C subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1032.5221 3 1029.51782 3085.53162 60646.83 0.69381 0.00071429 -0.32854 -0.00033824 0.36527 0.00037606 1029.85230586686 1032.85587880792 133.95 0.38695 133.95 133.7 134.08 0 77 15 8 0 0 0 0.031709 1 81618 14.053 14.053 1 0.71136 0.56574 0 6628800 3754600 2874200 5287 1541 1974 2029 8293 8293 DLIDNSFNR 9 0 1 Unmodified _DLIDNSFNR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.2716 2 547.26727 1092.51999 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.945 1 68.945 68.445 69.445 0 0 0 0 1.2444E-05 1 39995 107.9 69.762 1 5288 1898 1975 2030 8294 8294 DLIDNSFNR 9 0 1 Unmodified _DLIDNSFNR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.2717 2 547.26727 1092.51999 81863.02 0.38301 0.00020961 -0.48797 -0.00026705 -0.10496 -5.7441E-05 547.267026524538 552.271280221841 77.937 0.93252 77.937 77.491 78.423 0 284 61 7 0 0 0 0.0035543 2 41709 71.501 71.501 1 1.3572 1.1684 0 7407800 3216600 4191200 5289 1898 1975 2030 8295;8296 8295 DLIDNSFNR 9 0 1 Unmodified _DLIDNSFNR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 552.2712 2 547.26727 1092.51999 80996.33 0.56164 0.00030737 -0.28998 -0.0001587 0.27166 0.00014867 547.267243638653 552.271301823163 78.34 0.90627 78.34 77.905 78.812 0 276 60 7 0 0 0 0.041466 1 41077 41.448 41.448 1 1.3231 1.1037 0 6502300 2920000 3582300 5290 1898 1975 2030 8297 8297 DLIDYVR 7 0 1 Unmodified _DLIDYVR_ 0 0 0 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.2436 2 447.239993 892.465432 91319.53 0.35773 0.00015999 0.10902 4.8759E-05 0.46675 0.00020875 447.239998818629 452.24399556097 84.022 0.79346 84.022 83.593 84.387 0 160 66 5 0 0 0 0.03394 1 51563 63.148 8.3611 1 0.86555 0.98024 0 47947000 21390000 26557000 5291 2135 1976 2031 8298 8298 DLIEFGMIPEFVGR 14 0 1 Oxidation (M) _DLIEFGM(ox)IPEFVGR_ DLIEFGM(1)IPEFVGR DLIEFGM(59.54)IPEFVGR 0 1 0 Q9H072;A0A024R5X7;O76031 Q9H072 Q9H072 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.9148 2 819.913441 1637.81233 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.3 1 128.3 127.8 128.8 0 0 0 0 0.001285 1 83665 59.542 33.883 1 5292 191 1977 2032 8299 8299 156 DLIEFGMIPEFVGR 14 0 1 Oxidation (M) _DLIEFGM(ox)IPEFVGR_ DLIEFGM(1)IPEFVGR DLIEFGM(88.44)IPEFVGR 0 1 0 Q9H072;A0A024R5X7;O76031 Q9H072 Q9H072 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.9187 2 819.913441 1637.81233 NaN NaN NaN 0.38953 0.00031938 NaN NaN NaN NaN 127.97 0.39182 127.97 127.81 128.2 -7.6294E-06 0 0 0 3.7439E-05 1 85450 88.441 55.212 1 NaN NaN 0 3892000 0 3892000 5293 191 1977 2032 8300 8300 156 DLIEFGMIPEFVGR 14 0 1 Oxidation (M) _DLIEFGM(ox)IPEFVGR_ DLIEFGM(1)IPEFVGR DLIEFGM(66.56)IPEFVGR 0 1 0 Q9H072;A0A024R5X7;O76031 Q9H072 Q9H072 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.9146 2 819.913441 1637.81233 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.98 1 127.98 127.48 128.48 0 0 0 0 0.00095832 1 85502 66.56 51.588 1 5294 191 1977 2032 8301 8301 156 DLIGIDNLVVPGR 13 0 1 Unmodified _DLIGIDNLVVPGR_ 0 0 0 C9JME2;Q9Y4F1;M0QXT1;H0Y783 C9JME2 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.8958 2 690.895909 1379.77726 76952.92 1.0113 0.00069869 -0.33725 -0.00023301 0.67403 0.00046568 690.89567725203 695.899615709556 120.31 0.3848 120.31 120.11 120.49 0 73 27 4 0 0 0 0.00036193 1 79422 62.633 44.321 1 1.425 1.4367 0 6334900 2838700 3496200 5295 1139 1978 2033 8302 8302 DLIGVQNLLK 10 1 0 Unmodified _DLIGVQNLLK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.8449 2 556.837331 1111.66011 82922.49 0.55298 0.00030792 -0.050463 -2.81E-05 0.50251 0.00027982 556.837259865898 560.844307001735 114.19 0.46379 114.19 113.98 114.44 0 119 33 5 0 0 0 0.00019285 2 72326 94.302 54.301 1 1.9018 1.8757 0 9237600 3621500 5616100 5296 523 1979 2034 8303;8304 8303 DLIGVQNLLK 10 1 0 Unmodified _DLIGVQNLLK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.8447 2 556.837331 1111.66011 84947.68 0.35284 0.00019647 0.06867 3.8238E-05 0.42151 0.00023471 557.339033362993 560.844190444646 113.64 0.51598 113.64 113.4 113.91 7.6294E-06 105 36 5 0 0 0 0.0021232 1 73689 70.525 31.749 1 1.7128 1.7302 0 8445600 3661000 4784500 5297 523 1979 2034 8305 8305 DLIGVQNLLK 10 1 0 Unmodified _DLIGVQNLLK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.845 2 556.837331 1111.66011 NaN NaN NaN -0.1667 -9.2823E-05 NaN NaN NaN NaN 125.45 0.47761 125.45 125.17 125.64 0 0 0 0 0.010762 1 75313 62.546 21.517 1 NaN NaN 0 1864100 0 1864100 5298 523 1979 2034 8306 8306 DLIGVQNLLK 10 1 0 Unmodified _DLIGVQNLLK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.8443 2 556.837331 1111.66011 NaN NaN NaN -0.65283 -0.00036352 NaN NaN NaN NaN 125.26 0.48346 125.26 125.01 125.49 7.6294E-06 0 0 0 0.016462 1 74309 56.659 26.405 1 NaN NaN 0 1334400 0 1334400 5299 523 1979 2034 8307 8307 DLIHGAPVGK 10 1 0 Unmodified _DLIHGAPVGK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709;Q68EN4;H0Y7K8;Q5H934;Q7Z4C6 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.7948 2 503.787641 1005.56073 86031.64 0.38088 0.00019188 0.14922 7.5174E-05 0.5301 0.00026706 503.787634103191 507.794751551286 42.271 0.4026 42.271 42.088 42.49 0 141 29 7 0 0 0 0.0003605 2 22450 88.819 69.032 1 0.86779 0.97013 0 63394000 32177000 31217000 5300 1739 1980 2035 8308;8309 8309 DLIHGAPVGK 10 1 0 Unmodified _DLIHGAPVGK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709;Q68EN4;H0Y7K8;Q5H934;Q7Z4C6 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.7951 2 503.787641 1005.56073 87381.66 0.48543 0.00024455 -0.0272 -1.3703E-05 0.45823 0.00023085 503.787781089875 507.794643520329 41.1 0.75868 41.1 40.677 41.436 -3.8147E-06 165 60 4 0 0 0 0.0018674 2 22020 71.692 57.859 1 0.8535 0.91519 0 22927000 12222000 10705000 5301 1739 1980 2035 8310;8311 8311 DLIIEQR 7 0 1 Unmodified _DLIIEQR_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3 A0A024R4E5 A0A024R4E5 HDLBP Vigilin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.7572 2 443.753267 885.491981 NaN NaN NaN -0.028727 -1.2748E-05 NaN NaN NaN NaN 52.473 0.46463 52.473 52.291 52.756 3.8147E-06 0 0 0 0.048672 1 29911 58.981 9.6227 1 NaN NaN 0 13404000 0 13404000 5302 154 1981 2036 8312 8312 DLILADYGK 9 1 0 Unmodified _DLILADYGK_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.274 2 504.274032 1006.53351 85396.06 0.42587 0.00021476 0.28885 0.00014566 0.71473 0.00036042 504.274085348166 508.28113901275 81.872 1.2229 81.872 81.5 82.723 0 528 105 7 0 0 0 0.010772 1 50400 58.981 33.244 1 0.4219 0.48648 0 185140000 133790000 51352000 5303 1854 1982 2037 8313 8313 DLILADYGK 9 1 0 Unmodified _DLILADYGK_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.2747 2 504.274032 1006.53351 86867.31 0.46558 0.00023478 -0.028661 -1.4453E-05 0.43692 0.00022033 504.274128568956 508.280444515526 94.089 0.71564 94.089 93.603 94.318 0 174 49 6 0 0 0 0.052105 1 51719 37.191 19.156 1 1.0535 0.82741 0 2263400 1067400 1196000 5304 1854 1982 2037 8314 8314 DLILPTIQK 9 1 0 Unmodified _DLILPTIQK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.8215 2 520.82115 1039.62775 85493.63 0.59681 0.00031083 -0.069242 -3.6063E-05 0.52757 0.00027477 520.820950512176 524.828185913479 98.001 0.65543 98.001 97.636 98.292 0 195 53 5 0 0 0 0.0091127 3 59794 60.478 48.709 1 1.8865 1.8546 0 23544000 10316000 13228000 5305 1205 1983 2038 8315;8316;8317 8315 DLILPTIQK 9 1 0 Unmodified _DLILPTIQK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.8283 2 520.82115 1039.62775 86476.14 0.69636 0.00036268 0.55255 0.00028778 1.2489 0.00065046 520.821115180461 524.82827959199 97.216 0.82484 97.216 96.763 97.588 0 243 65 6 0 0 0 0.019553 2 60709 51.059 46.071 1 1.7431 1.8119 0 18938000 5581200 13357000 5306 1205 1983 2038 8318;8319 8318 DLINLAK 7 1 0 Unmodified _DLINLAK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.7465 2 393.739628 785.464704 94519.08 0.26163 0.00010301 0.13234 5.2107E-05 0.39397 0.00015512 393.739658153475 397.746648534786 72.609 0.99532 72.609 72.343 73.338 0 349 85 8 0 0 0 0.026804 1 43500 79.454 12.419 1 0.75891 0.89307 0 392550000 209640000 182900000 5307 1506 1984 2039 8320 8320 DLINLAK 7 1 0 Unmodified _DLINLAK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 393.7398 2 393.739628 785.464704 94833.92 0.16498 6.4959E-05 0.061846 2.4351E-05 0.22683 8.931E-05 393.739549477258 397.746665920174 83.917 1.1267 83.917 83.559 84.686 0 331 89 6 0 0 0 0.059861 1 45654 50.539 3.7368 1 0.93963 0.79449 0 57996000 29529000 28467000 5308 1506 1984 2039 8321 8321 DLIQDQNMDEK 11 1 0 Oxidation (M) _DLIQDQNM(ox)DEK_ DLIQDQNM(1)DEK DLIQDQNM(90.11)DEK 0 1 0 Q9H307;A8K964 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.8108 2 682.803556 1363.59256 76044.26 0.42396 0.00028948 0.11792 8.0518E-05 0.54188 0.00037 683.304904817698 686.81087821964 30.724 0.38626 30.724 30.572 30.958 0 102 34 5 0 0 0 0.00012705 1 15026 90.108 82.183 1 1.4102 1.4478 0 14461000 7019900 7441400 5309 2028 1985 2040 8322 8322 1866 DLIQDQNMDEK 11 1 0 Oxidation (M) _DLIQDQNM(ox)DEK_ DLIQDQNM(1)DEK DLIQDQNM(86.9)DEK 0 1 0 Q9H307;A8K964 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.8104 2 682.803556 1363.59256 74313.19 0.29015 0.00019811 -0.06955 -4.7489E-05 0.2206 0.00015063 682.803653989667 686.81101323114 30.139 0.35478 30.139 30.027 30.382 1.9073E-06 120 29 6 0 0 0 0.00016031 1 14677 86.898 78.973 1 1.8282 1.9044 0 19079000 5390700 13688000 5310 2028 1985 2040 8323 8323 1866 DLIQMLVQR 9 0 1 Oxidation (M) _DLIQM(ox)LVQR_ DLIQM(1)LVQR DLIQM(67.03)LVQR 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.3135 2 566.313166 1130.61178 80345.93 0.7938 0.00044954 -0.35563 -0.0002014 0.43817 0.00024814 566.312942370561 571.317143013678 104.55 0.76194 104.55 104.13 104.89 7.6294E-06 271 62 6 0 0 0 0.002576 1 64474 67.032 52.366 1 0.6841 0.70803 0 20360000 11431000 8929500 5311 1679 1986 2041 8324 8324 1481 DLIQMLVQR 9 0 1 Oxidation (M) _DLIQM(ox)LVQR_ DLIQM(1)LVQR DLIQM(48.56)LVQR 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.3129 2 566.313166 1130.61178 82752.52 0.92783 0.00052544 0.19976 0.00011313 1.1276 0.00063857 566.313000954108 571.317275690905 129.82 0.4469 129.82 129.6 130.05 0 44 14 4 0 0 0 0.011477 1 77761 48.561 39.204 1 1.1223 0.9743 0 977890 476810 501080 5312 1679 1986 2041 8325 8325 1481 DLIQMLVQR 9 0 1 Unmodified _DLIQMLVQR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.3148 2 558.315709 1114.61686 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.67 1 117.67 117.17 118.17 0 0 0 0 0.016267 1 77231 67.032 23.786 1 5313 1679 1986 2042 8326 8326 DLIQMLVQR 9 0 1 Unmodified _DLIQMLVQR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.316 2 558.315709 1114.61686 81277.28 0.63779 0.00035609 -0.6268 -0.00034995 0.01099 6.136E-06 558.315542394792 563.319374430234 130.04 0.52762 130.04 129.75 130.27 0 93 24 5 0 0 0 0.014435 3 78682 55.676 52.268 1 1.0495 0.92122 0 1749500 922700 826750 5314 1679 1986 2042 8327;8328;8329 8328 DLIQMLVQR 9 0 1 Unmodified _DLIQMLVQR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.3201 2 558.315709 1114.61686 81104.62 1.0029 0.00055993 -0.059086 -3.2989E-05 0.94381 0.00052694 558.315647878194 563.319593873738 129.93 0.4469 129.93 129.6 130.05 0 52 14 6 0 0 0 0.0021719 2 77700 75.854 63.48 1 0.89876 0.79384 0 1894900 1063700 831250 5315 1679 1986 2042 8330;8331 8331 DLITQATLLYTMADK 15 1 0 Oxidation (M) _DLITQATLLYTM(ox)ADK_ DLITQATLLYTM(1)ADK DLITQATLLYTM(79.82)ADK 0 1 0 A8K6X9;Q6PD62;H0YCE8 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.4256 2 856.942395 1711.87024 65825.14 0.80796 0.00069238 -0.11916 -0.00010211 0.6888 0.00059026 857.442827242155 860.949798567834 121.58 0.56248 121.58 121.32 121.89 0 193 41 7 0 0 0 6.9653E-05 2 80518 79.82 68.288 1 2.6764 2.6957 0 13440000 3537700 9902400 5316 765 1987 2043 8332;8333 8333 591 DLIVAEA 7 0 0 Unmodified _DLIVAEA_ 0 0 0 Q6LES9;A8K3S0;Q59GW7;P40937;A8K4Z2 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.3976 1 730.398147 729.39087 NaN NaN NaN -0.14445 -0.00010551 NaN NaN NaN NaN 86.939 0.82342 86.939 86.369 87.192 0 0 0 0 0.054077 1 52474 67.035 38.72 1 5317 726 1988 2044 8334 8334 DLKPENILVTSGGTVK 16 2 0 Unmodified _DLKPENILVTSGGTVK_ 0 0 1 F8VZZ0;F8VZ51;Q6LC83;A0A024RBB6;P11802;F8VXD2;F8VYH9;F8VTV8;F8VWX7 F8VZZ0 F8VZZ0 CDK4 Cyclin-dependent kinase 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.9856 2 835.969802 1669.92505 NaN NaN NaN -0.57932 -0.0004843 NaN NaN NaN NaN 81.008 0.41443 81.008 80.792 81.206 0 0 0 0 0.0035861 1 49412 68.44 44.836 1 NaN NaN 0 8785100 0 8785100 5318 331 1989 2045 8335 8335 DLKPQNLLIDDK 12 2 0 Unmodified _DLKPQNLLIDDK_ 0 0 1 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.408 2 706.393199 1410.77184 72472.2 0.87182 0.00061585 0.13275 9.3777E-05 1.0046 0.00070962 706.393233514447 714.407292075376 79.704 0.70622 79.704 79.463 80.169 0 316 61 8 0 0 0 0.0012784 2 47247 86.288 74.241 1 1.3082 1.544 0 91551000 38041000 53510000 5319 25 1990 2046 8336;8337 8336 DLKPQNLLIDDK 12 2 0 Unmodified _DLKPQNLLIDDK_ 0 0 1 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.408 2 706.393199 1410.77184 72851.61 0.5175 0.00036556 0.019029 1.3442E-05 0.53653 0.000379 706.393050196666 714.407302052152 78.619 0.75835 78.619 78.183 78.941 0 298 65 8 0 0 0 1.7766E-07 1 47554 117.95 117.95 1 1.4205 1.6515 0 141570000 62761000 78813000 5320 25 1990 2046 8338 8338 DLLALFNSFKPK 12 2 0 Unmodified _DLLALFNSFKPK_ 0 0 1 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.9125 2 696.89792 1391.78129 73741.21 1.1726 0.00081718 0.016543 1.1529E-05 1.1891 0.00082871 696.89784370519 704.911963594505 127.14 0.65892 127.14 126.78 127.44 0 182 37 7 0 0 0 0.00019152 2 82765 99.568 99.568 1 1.0748 1.2791 0 17532000 7937200 9594600 5321 2033 1991 2047 8339;8340 8340 DLLALFNSFKPK 12 2 0 Unmodified _DLLALFNSFKPK_ 0 0 1 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.9127 2 696.89792 1391.78129 73488.46 1.0307 0.00071828 -0.062941 -4.3864E-05 0.96775 0.00067442 696.897874588827 704.912035982911 126.67 0.59075 126.67 126.38 126.97 0 196 36 7 0 0 0 0.00033213 2 84496 98.04 98.04 1 1.0104 1.1592 0 21555000 9816900 11738000 5322 2033 1991 2047 8341;8342 8342 DLLATGTR 8 0 1 Unmodified _DLLATGTR_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.7371 2 423.737617 845.460681 NaN NaN NaN 0.09733 4.1242E-05 NaN NaN NaN NaN 42.483 0.44947 42.483 42.237 42.686 0 0 0 0 0.027685 1 22652 60.682 32.259 1 NaN NaN 0 6109800 6109800 0 5323 371 1992 2048 8343 8343 DLLDLLVEAK 10 1 0 Unmodified _DLLDLLVEAK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E132;A0A0J9YVQ7;A0A087WVZ1 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8295 2 564.829172 1127.64379 81475.45 0.93774 0.00052966 -0.22338 -0.00012617 0.71436 0.00040349 564.828950598861 568.836038148902 132.04 0.76917 132.04 131.78 132.55 0 254 51 8 0 0 0 3.8375E-08 2 86140 118.18 118.18 1 1.6781 1.8123 0 36878000 13684000 23195000 5324 522 1993 2049 8344;8345 8344 DLLDLLVEAK 10 1 0 Unmodified _DLLDLLVEAK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E132;A0A0J9YVQ7;A0A087WVZ1 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1128.6541 1 1128.65107 1127.64379 59253.54 0.35027 0.00039534 0.12087 0.00013642 0.47114 0.00053176 1128.65111687208 1136.66532732787 132.06 0.44489 132.06 131.81 132.26 0 76 29 4 0 0 0 0.014735 1 86310 57.96 57.96 1 1.827 1.8365 0 7372200 2212500 5159700 5325 522 1993 2049 8346 8346 DLLDLLVEAK 10 1 0 Unmodified _DLLDLLVEAK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E132;A0A0J9YVQ7;A0A087WVZ1 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.8362 2 564.829172 1127.64379 80858.66 0.93081 0.00052575 -0.35109 -0.0001983 0.57973 0.00032745 564.828924025666 568.835967486444 131.67 0.66206 131.67 131.39 132.05 1.5259E-05 268 48 8 0 0 0 3.8375E-08 2 87971 118.18 118.18 1 1.6051 1.7783 0 46677000 18610000 28067000 5326 522 1993 2049 8347;8348 8347 DLLFILTAK 9 1 0 Unmodified _DLLFILTAK_ 0 0 0 Q16531;F5GY55;B7Z2A1;B4DZP5;F5H2L3;F5GWI0;F5GZY8;F5GYG8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.3255 2 517.318243 1032.62193 84359.55 0.74717 0.00038653 -0.27486 -0.00014219 0.47232 0.00024434 517.318019300767 521.325050143895 125.99 0.73045 125.99 125.61 126.34 0 265 53 6 0 0 0 0.0042207 2 81860 69.812 59.344 1 0.74887 0.73439 0 22635000 13703000 8931200 5327 1770 1994 2050 8349;8350 8350 DLLFILTAK 9 1 0 Unmodified _DLLFILTAK_ 0 0 0 Q16531;F5GY55;B7Z2A1;B4DZP5;F5H2L3;F5GWI0;F5GZY8;F5GYG8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.3179 2 517.318243 1032.62193 84725.4 0.67935 0.00035144 -0.13033 -6.7423E-05 0.54902 0.00028402 517.318050528225 521.325156003718 125.49 0.76873 125.49 125.16 125.93 7.6294E-06 244 51 7 0 0 0 0.012016 3 83454 57.859 46.79 1 0.74077 0.78572 0 23452000 13565000 9886700 5328 1770 1994 2050 8351;8352;8353 8352 DLLHLPELFSPGMLVR 16 0 1 Oxidation (M) _DLLHLPELFSPGM(ox)LVR_ DLLHLPELFSPGM(1)LVR DLLHLPELFSPGM(48.18)LVR 0 1 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.674 3 618.33784 1851.99169 76295.45 0.79399 0.00049095 0.057789 3.5733E-05 0.85178 0.00052669 618.672074838054 622.008405088705 132.95 0.96243 132.95 132.43 133.39 0 278 44 8 0 0 0 0.00018767 1 86624 48.177 48.177 1 1.5552 1.618 0 21977000 8673900 13303000 5329 1741 1995 2051 8354 8354 1579 DLLHLPELFSPGMLVR 16 0 1 Oxidation (M) _DLLHLPELFSPGM(ox)LVR_ DLLHLPELFSPGM(1)LVR DLLHLPELFSPGM(48.82)LVR 0 1 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3389 3 618.33784 1851.99169 76503.77 0.72834 0.00045036 0.11139 6.8879E-05 0.83973 0.00051924 618.338136931881 621.673906232669 132.38 0.99657 132.38 131.93 132.93 0 379 59 9 0 0 0 0.00014954 2 88408 48.823 48.823 1 1.5576 1.698 0 29481000 12821000 16660000 5330 1741 1995 2051 8355;8356 8355 1579 DLLHPSLEEEK 11 1 0 Unmodified _DLLHPSLEEEK_ 0 0 0 H0YMV8;Q71UM5;C9JLI6 H0YMV8 H0YMV8 RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.343 2 655.33535 1308.65615 74753.59 0.89045 0.00058354 -0.49192 -0.00032237 0.39853 0.00026117 655.335225833643 659.34156265504 67.645 1.0389 67.645 67.278 68.317 0 404 89 8 0 0 0 1.218E-12 2 39023 137.46 127.76 1 0.43579 0.49845 0 185220000 119380000 65841000 5331 1298 1996 2052 8357;8358 8358 DLLHPSLEEEK 11 1 0 Unmodified _DLLHPSLEEEK_ 0 0 0 H0YMV8;Q71UM5;C9JLI6 H0YMV8 H0YMV8 RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.34 2 655.33535 1308.65615 75454.09 0.77483 0.00050777 -0.46075 -0.00030195 0.31408 0.00020583 655.335128260934 659.341762492107 66.439 0.8248 66.439 66.1 66.925 -7.6294E-06 327 67 9 0 0 0 7.8181E-08 2 39136 113.93 113.93 1 0.48265 0.55898 0 209970000 135290000 74688000 5332 1298 1996 2052 8359;8360 8360 DLLHPSLEEEK 11 1 0 Unmodified _DLLHPSLEEEK_ 0 0 0 H0YMV8;Q71UM5;C9JLI6 H0YMV8 H0YMV8 RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.343 2 655.33535 1308.65615 74706.82 0.57464 0.00037658 0.11227 7.3572E-05 0.6869 0.00045015 655.33542103184 659.342425984847 76.983 1.1232 76.983 76.585 77.708 0 299 74 8 0 0 0 0.00039744 2 41008 99.53 99.53 1 0.8515 0.71896 0 56963000 30175000 26788000 5333 1298 1996 2052 8361;8362 8361 DLLHPSLEEEK 11 1 0 Unmodified _DLLHPSLEEEK_ 0 0 0 H0YMV8;Q71UM5;C9JLI6 H0YMV8 H0YMV8 RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.3423 2 655.33535 1308.65615 74745.81 0.57729 0.00037832 -0.47735 -0.00031283 0.099933 6.549E-05 655.335382386997 659.342356317985 77.251 1.4368 77.251 76.893 78.329 0 389 59 10 0 0 0 0.00031862 2 40358 92.239 92.239 1 0.86823 0.72802 0 47469000 26731000 20738000 5334 1298 1996 2052 8363;8364 8363 DLLHPSPEEEK 11 1 0 Unmodified _DLLHPSPEEEK_ 0 0 0 P42677;Q5T4L4 P42677 P42677 RPS27 40S ribosomal protein S27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3279 2 647.319699 1292.62485 74770.88 0.83277 0.00053907 -0.055891 -3.6179E-05 0.77688 0.00050289 647.319677685646 651.326696360527 42.994 1.1 42.994 42.456 43.556 0 624 91 9 0 0 0 5.9012E-17 2 22825 180.07 147.23 1 1.076 1.2706 0 371390000 179920000 191470000 5335 1564 1997 2053 8365;8366 8366 DLLHPSPEEEK 11 1 0 Unmodified _DLLHPSPEEEK_ 0 0 0 P42677;Q5T4L4 P42677 P42677 RPS27 40S ribosomal protein S27 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.327 2 647.319699 1292.62485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.611 1 43.611 43.111 44.111 -3.8147E-06 0 0 0 0.00058585 1 23339 74.162 48.603 1 5336 1564 1997 2053 8367 8367 DLLHPSPEEEK 11 1 0 Unmodified _DLLHPSPEEEK_ 0 0 0 P42677;Q5T4L4 P42677 P42677 RPS27 40S ribosomal protein S27 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3281 2 647.319699 1292.62485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.155 1 44.155 43.655 44.655 -3.8147E-06 0 0 0 0.047667 1 23681 43.77 20.45 1 5337 1564 1997 2053 8368 8368 DLLHPSPEEEK 11 1 0 Unmodified _DLLHPSPEEEK_ 0 0 0 P42677;Q5T4L4 P42677 P42677 RPS27 40S ribosomal protein S27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3273 2 647.319699 1292.62485 74889.53 0.87932 0.0005692 -0.14863 -9.6209E-05 0.7307 0.000473 647.319624127951 651.326614621503 42.286 1.296 42.286 41.821 43.117 0 692 111 10 0 0 0 9.6045E-13 2 23010 167.09 134.25 1 1.0134 1.1949 0 694810000 332440000 362370000 5338 1564 1997 2053 8369;8370 8370 DLLHPSPEEEK 11 1 0 Unmodified _DLLHPSPEEEK_ 0 0 0 P42677;Q5T4L4 P42677 P42677 RPS27 40S ribosomal protein S27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3271 2 647.319699 1292.62485 74486.65 0.54801 0.00035474 -0.13442 -8.701E-05 0.4136 0.00026773 647.319743157896 651.326707244243 49.383 2.5269 49.383 48.761 51.288 0 854 199 10 0 0 0 4.1119E-08 4 23981 138.22 100.13 1 1.9959 1.7449 0 181540000 60908000 120630000 5339 1564 1997 2053 8371;8372;8373;8374 8371 DLLHPSPEEEK 11 1 0 Unmodified _DLLHPSPEEEK_ 0 0 0 P42677;Q5T4L4 P42677 P42677 RPS27 40S ribosomal protein S27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.3192 2 647.319699 1292.62485 75013.8 0.32544 0.00021066 0.057048 3.6929E-05 0.38249 0.00024759 647.319891126969 651.326817271691 49.677 2.4035 49.677 49.111 51.515 0 904 180 11 0 0 0 2.7957E-05 2 23582 101.82 82.723 1 1.992 1.7153 0 175640000 57747000 117890000 5340 1564 1997 2053 8375;8376 8375 DLLLNTMSQEEK 12 1 0 Oxidation (M) _DLLLNTM(ox)SQEEK_ DLLLNTM(1)SQEEK DLLLNTM(74.53)SQEEK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.8583 2 718.850506 1435.68646 NaN NaN NaN -0.30736 -0.00022095 NaN NaN NaN NaN 62.531 0.99919 62.531 62.224 63.223 0 0 0 0 0.00054413 1 36717 74.533 59.383 1 NaN NaN 0 11005000 0 11005000 5341 1665 1998 2054 8377 8377 1444 DLLLNTMSQEEK 12 1 0 Oxidation (M) _DLLLNTM(ox)SQEEK_ DLLLNTM(1)SQEEK DLLLNTM(88.5)SQEEK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.8509 2 718.850506 1435.68646 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.714 1 62.714 62.214 63.214 3.8147E-06 0 0 0 6.2116E-05 1 36800 88.495 45.897 1 5342 1665 1998 2054 8378 8378 1444 DLLLNTMSQEEK 12 1 0 Unmodified _DLLLNTMSQEEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.8536 2 710.853049 1419.69155 NaN NaN NaN 0.989 0.00070303 NaN NaN NaN NaN 99.132 0.56215 99.132 98.875 99.437 0 0 0 0 0.001941 1 55962 72.321 53.05 1 NaN NaN 0 1133600 1133600 0 5343 1665 1998 2055 8379 8379 DLLLNTMSQEEK 12 1 0 Unmodified _DLLLNTMSQEEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.8529 2 710.853049 1419.69155 NaN NaN NaN 0.4713 0.00033502 NaN NaN NaN NaN 99.119 0.61732 99.119 98.816 99.434 0 0 0 0 0.026076 1 55060 48.998 34.332 1 NaN NaN 0 1395800 1395800 0 5344 1665 1998 2055 8380 8380 DLLLVR 6 0 1 Unmodified _DLLLVR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;V9H0D5;V9H023;V9H0B2;Q0ZAJ2;V9H062;V9H015;C9J809 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 364.7371 2 364.736889 727.459225 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.005 1 82.005 81.505 82.505 -7.6294E-06 0 0 0 0.049101 1 48934 74.849 0 1 5345 1237 1999 2056 8381 8381 DLLPCFPEGLVK 12 1 0 Unmodified _DLLPCFPEGLVK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.3691 2 694.368138 1386.72172 72190.56 0.74414 0.00051671 0.66578 0.0004623 1.4099 0.00097901 694.369069272931 698.375787831283 122.05 0.64392 122.05 121.82 122.47 -7.6294E-06 237 44 8 0 0 0 0.00098223 2 78978 74.162 57.445 1 1.1642 1.18 0 27684000 12005000 15679000 5346 907 2000 2057 8382;8383 8383 DLLPCFPEGLVK 12 1 0 Unmodified _DLLPCFPEGLVK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.3748 2 694.368138 1386.72172 71878.09 0.78541 0.00054536 0.71401 0.00049579 1.4994 0.0010411 694.36905872619 698.375913027302 121.61 0.69083 121.61 121.36 122.05 7.6294E-06 239 50 7 0 0 0 0.0010242 1 80480 62.303 51.931 1 1.2077 1.2151 0 27163000 11709000 15455000 5347 907 2000 2057 8384 8384 DLLPCFPEGLVK 12 1 0 Unmodified _DLLPCFPEGLVK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 698.3749 2 694.368138 1386.72172 73043.92 1.0104 0.0007016 -0.27179 -0.00018872 0.73862 0.00051287 694.368257556751 698.374899937892 134.17 0.31845 134.17 133.97 134.28 0 87 14 8 0 0 0 0.018707 1 81790 40.589 36.291 1 1.3111 1.0447 0 9771500 4651600 5119900 5348 907 2000 2057 8385 8385 DLLPCFPEGLVK 12 1 0 Unmodified _DLLPCFPEGLVK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.8774 2 694.368138 1386.72172 73032.07 1.1396 0.0007913 -0.18096 -0.00012566 0.95863 0.00066564 694.36809528127 698.37495812287 133.99 0.39502 133.99 133.78 134.17 0 118 19 8 0 0 0 0.005381 1 80753 51.092 46.793 1 1.3348 1.0978 0 10064000 4208000 5856400 5349 907 2000 2057 8386 8386 DLLPHPVLGRPPAPLGAPQGAVYTDIPAPEAAR 33 0 2 Unmodified _DLLPHPVLGRPPAPLGAPQGAVYTDIPAPEAAR_ 0 0 1 P31276 P31276 P31276 HOXC13 Homeobox protein Hox-C13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.4609 4 839.9583 3355.80409 66957.16 0.76901 0.00064594 0.22514 0.00018911 0.99415 0.00083504 840.459537225517 845.213743493061 114.54 0.4287 114.54 114.33 114.76 0 125 27 7 0 0 0 0.00023799 2 74511 25.657 25.657 1 0.44614 0.46212 0 12740000 9644200 3095500 5350 1534 2001 2058 8387;8388 8387 DLLPSDMAVALLEAQAGTGHIIDPATSAR 29 0 1 Oxidation (M) _DLLPSDM(ox)AVALLEAQAGTGHIIDPATSAR_ DLLPSDM(1)AVALLEAQAGTGHIIDPATSAR DLLPSDM(49.79)AVALLEAQAGTGHIIDPATSAR 0 1 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 987.509 3 983.837722 2948.49134 61517.42 0.6407 0.00063034 -0.18872 -0.00018567 0.45198 0.00044468 984.172086571797 987.508201775771 125.28 0.62989 125.28 124.98 125.61 0 285 40 10 0 0 0 1.0904E-10 1 81327 49.793 49.793 1 2.1635 2.2068 0 30644000 9071500 21572000 5351 1754 2002 2059 8389 8389 1608 DLLPSDMAVALLEAQAGTGHIIDPATSAR 29 0 1 Oxidation (M) _DLLPSDM(ox)AVALLEAQAGTGHIIDPATSAR_ DLLPSDM(1)AVALLEAQAGTGHIIDPATSAR DLLPSDM(48.32)AVALLEAQAGTGHIIDPATSAR 0 1 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 987.509 3 983.837722 2948.49134 61819.57 0.85379 0.00083999 -0.25523 -0.00025111 0.59855 0.00058888 984.172040692628 987.507927499023 124.97 0.51041 124.97 124.73 125.24 7.6294E-06 290 36 11 0 0 0 7.5252E-08 1 83108 48.321 48.321 1 2.2881 2.5123 0 40407000 13061000 27346000 5352 1754 2002 2059 8390 8390 1608 DLLPVAVEILPVSEK 15 1 0 Unmodified _DLLPVAVEILPVSEK_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.4841 2 811.474189 1620.93382 69136.61 0.80496 0.0006532 -0.14257 -0.00011569 0.66239 0.00053751 811.976227344926 815.983019388161 132.81 0.45227 132.81 132.62 133.07 0 86 22 6 0 0 0 0.00021228 1 86788 75.695 75.695 1 0.96872 0.97349 0 7396100 3908400 3487800 5353 476 2003 2060 8391 8391 DLLPVAVEILPVSEK 15 1 0 Unmodified _DLLPVAVEILPVSEK_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.4819 2 811.474189 1620.93382 69143.7 0.92531 0.00075087 -0.30796 -0.0002499 0.61735 0.00050096 811.976161069867 815.480952496627 132.45 0.42381 132.45 132.26 132.68 0 91 23 6 0 0 0 4.3705E-05 1 88691 85.845 85.845 1 0.94384 0.94766 0 6957000 3208300 3748700 5354 476 2003 2060 8392 8392 DLLQADQLGSLK 12 1 0 Unmodified _DLLQADQLGSLK_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.8332 2 650.858992 1299.70343 76998.48 0.79448 0.0005171 -0.73463 -0.00047814 0.059851 3.8954E-05 650.858108494555 654.865898491278 97.074 0.53503 97.074 96.822 97.357 0 98 48 4 0 0 0 0.0068504 1 59330 71.349 24.458 1 1.3519 1.3356 0 9360000 3544800 5815300 5355 1070 2004 2061 8393 8393 DLLQDLK 7 1 0 Unmodified _DLLQDLK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.7497 2 422.742368 843.470183 93832.19 0.37425 0.00015821 -0.073208 -3.0948E-05 0.30104 0.00012726 422.74215235923 426.749389311534 84.776 0.72849 84.776 84.508 85.237 0 204 59 5 0 0 0 0.028306 2 50864 72.138 7.362 1 1.8527 1.8843 0 27950000 10013000 17937000 5356 1851 2005 2062 8394;8395 8395 DLLQDLK 7 1 0 Unmodified _DLLQDLK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.7494 2 422.742368 843.470183 93329.38 0.34995 0.00014794 0.26441 0.00011178 0.61436 0.00025972 422.742416091034 426.749504115368 83.917 0.78599 83.917 83.426 84.212 0 212 64 4 0 0 0 0.030326 2 51318 68.915 7.3398 1 1.8631 2.0369 0 40485000 15953000 24531000 5357 1851 2005 2062 8396;8397 8397 DLLQQLLPK 9 1 0 Unmodified _DLLQQLLPK_ 0 0 0 B4DS87;B4DSG6;B2R7G4;P32780 B4DS87 B4DS87 GTF2H1 General transcription factor IIH subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.327 2 534.326599 1066.63865 NaN NaN NaN -0.28614 -0.00015289 NaN NaN NaN NaN 120.75 0.53295 120.75 120.4 120.93 7.6294E-06 0 0 0 0.0036992 1 77844 77.923 15.923 1 NaN NaN 0 2365200 2365200 0 5358 851 2006 2063 8398 8398 DLLQQLLPK 9 1 0 Unmodified _DLLQQLLPK_ 0 0 0 B4DS87;B4DSG6;B2R7G4;P32780 B4DS87 B4DS87 GTF2H1 General transcription factor IIH subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.3266 2 534.326599 1066.63865 86344.3 0.9424 0.00050355 -0.4904 -0.00026203 0.452 0.00024151 534.326317394333 538.333373717858 120.2 0.50365 120.2 119.97 120.48 0 108 36 4 0 0 0 0.0013315 1 79369 86.794 53.953 1 0.6373 0.63356 0 5771900 3783000 1988900 5359 851 2006 2063 8399 8399 DLLQQLLPK 9 1 0 Unmodified _DLLQQLLPK_ 0 0 0 B4DS87;B4DSG6;B2R7G4;P32780 B4DS87 B4DS87 GTF2H1 General transcription factor IIH subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.3343 2 534.326599 1066.63865 85784.72 1.0736 0.00057366 -0.34978 -0.0001869 0.72383 0.00038676 534.326389224382 538.333529694116 132.86 0.45142 132.86 132.59 133.04 0 60 20 4 0 0 0 0.039815 1 79906 42.109 25.569 1 0.77322 0.64032 0 1704100 915840 788220 5360 851 2006 2063 8400 8400 DLLSCNHTVLDPDLR 15 0 1 Unmodified _DLLSCNHTVLDPDLR_ 0 0 0 E7EW05;B4DT66;Q9NVU7 E7EW05 E7EW05 SDAD1 Protein SDA1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 590.2961 3 589.961321 1766.86213 80228.44 0.58903 0.00034751 0.2179 0.00012855 0.80694 0.00047606 589.961764032339 593.297012665442 105.26 0.38358 105.26 105 105.39 0 80 23 6 0 0 0 0.0085726 1 60055 28.212 21.631 1 0.91158 0.79068 0 2105800 1161900 943960 5361 1032 2007 2064 8401 8401 DLLSCNHTVLDPDLR 15 0 1 Unmodified _DLLSCNHTVLDPDLR_ 0 0 0 E7EW05;B4DT66;Q9NVU7 E7EW05 E7EW05 SDAD1 Protein SDA1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.2953 3 589.961321 1766.86213 81010.63 0.51103 0.00030149 0.78374 0.00046238 1.2948 0.00076387 589.961683857087 593.297705965582 105.03 0.3159 105.03 104.83 105.15 -7.6294E-06 62 18 5 0 0 0 0.045993 1 58999 17.281 17.281 1 0.73149 0.64567 0 2448600 1159700 1288900 5362 1032 2007 2064 8402 8402 DLLTPPADKPGQDNR 15 1 1 Unmodified _DLLTPPADKPGQDNR_ 0 0 1 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2819 3 546.281159 1635.82165 83864.84 0.76749 0.00041927 0.19186 0.00010481 0.95936 0.00052408 546.28169523001 552.288578511474 48.274 0.61115 48.274 47.987 48.598 0 150 49 5 0 0 0 0.0010124 1 26384 45.614 45.614 1 0.46643 0.5491 0 33993000 23168000 10825000 5363 1323 2008 2065 8403 8403 DLLVNSGPLAVR 12 0 1 Unmodified _DLLVNSGPLAVR_ 0 0 0 B2R6H3;Q8NI77;Q4G194 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.3688 2 627.364244 1252.71394 77426.58 0.74941 0.00047015 0.54175 0.00033988 1.2912 0.00081003 627.364841931895 632.367813923004 99.575 0.83176 99.575 99.096 99.928 0 207 66 5 0 0 0 0.00047768 1 62306 70.399 34.455 1 0.52935 0.5262 0 16242000 9723300 6518400 5364 842 2009 2066 8404 8404 DLLVNSGPLAVR 12 0 1 Unmodified _DLLVNSGPLAVR_ 0 0 0 B2R6H3;Q8NI77;Q4G194 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3691 2 627.364244 1252.71394 79046.82 0.88039 0.00055233 0.53076 0.00033298 1.4111 0.0008853 627.364878876657 632.367973317132 112.41 0.79448 112.41 112.11 112.91 0 110 41 5 0 0 0 0.013411 1 65274 44.318 20.998 1 0.56356 0.48874 0 2091700 1150800 940910 5365 842 2009 2066 8405 8405 DLMVGDEASELR 12 0 1 Oxidation (M) _DLM(ox)VGDEASELR_ DLM(1)VGDEASELR DLM(80.24)VGDEASELR 0 1 0 B4DHK9;P61160 B4DHK9 B4DHK9 ACTR2 Actin-related protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.8185 2 675.813924 1349.61329 NaN NaN NaN -0.092163 -6.2285E-05 NaN NaN NaN NaN 69.701 0.48752 69.701 69.363 69.851 0 0 0 0 0.00038842 1 40429 80.24 47.92 1 NaN NaN 0 8789800 0 8789800 5366 976 2010 2067 8406 8406 780 DLMVGDEASELR 12 0 1 Oxidation (M) _DLM(ox)VGDEASELR_ DLM(1)VGDEASELR DLM(85.35)VGDEASELR 0 1 0 B4DHK9;P61160 B4DHK9 B4DHK9 ACTR2 Actin-related protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.819 2 675.813924 1349.61329 NaN NaN NaN -0.30423 -0.0002056 NaN NaN NaN NaN 68.539 0.59359 68.539 68.318 68.912 0 0 0 0 0.00024061 1 40721 85.355 45.353 1 NaN NaN 0 13044000 0 13044000 5367 976 2010 2067 8407 8407 780 DLNDRPVGPR 10 0 2 Unmodified _DLNDRPVGPR_ 0 0 1 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.8011 2 569.801811 1137.58907 79332.14 0.52399 0.00029857 0.024861 1.4166E-05 0.54885 0.00031274 569.801715231409 579.810133178853 23.635 0.23588 23.635 23.489 23.725 0 37 8 6 0 0 0 0.0038952 1 9468 82.279 53.117 1 0.70985 0.79377 0 26333000 15676000 10658000 5368 1122 2011 2068 8408 8408 DLNFEVR 7 0 1 Unmodified _DLNFEVR_ 0 0 0 B4DL07;P28288;B4DZ22 B4DL07 B4DL07 ABCD3 ATP-binding cassette sub-family D member 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.7343 2 446.729792 891.445031 NaN NaN NaN 0.42428 0.00018954 NaN NaN NaN NaN 69.412 0.81432 69.412 69.031 69.845 0 0 0 0 0.045012 1 41202 60.788 17.788 1 NaN NaN 0 4992800 0 4992800 5369 994 2012 2069 8409 8409 DLNILGR 7 0 1 Unmodified _DLNILGR_ 0 0 0 A0A024R5Q8;Q05D32 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.7391 2 400.734877 799.455202 97880.27 -0.053547 -2.1458E-05 0.21993 8.8132E-05 0.16638 6.6674E-05 400.734898325019 405.738991806266 76.699 0.82384 76.699 76.421 77.245 0 190 70 4 0 0 0 0.026656 1 45291 75.311 30.7 1 0.93446 0.97939 0 10962000 5305800 5656400 5370 187 2013 2070 8410 8410 DLNILGR 7 0 1 Unmodified _DLNILGR_ 0 0 0 A0A024R5Q8;Q05D32 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 405.2646 2 400.734877 799.455202 98654.96 0.066888 2.6804E-05 -0.23742 -9.5143E-05 -0.17053 -6.8339E-05 400.734688591965 405.738876602324 75.687 0.7328 75.687 75.435 76.168 0 157 67 4 0 0 0 0.038498 1 45467 60.358 12.185 1 0.99341 0.99029 0 11663000 5976900 5686500 5371 187 2013 2070 8411 8411 DLNSQADSLMTSSAFDTSQVK 21 1 0 Oxidation (M) _DLNSQADSLM(ox)TSSAFDTSQVK_ DLNSQADSLM(1)TSSAFDTSQVK DLNSQADSLM(56.6)TSSAFDTSQVK 0 1 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1135.0225 2 1131.01554 2260.01652 NaN NaN NaN -0.029433 -3.3289E-05 NaN NaN NaN NaN 85.166 0.32729 85.166 84.95 85.277 0 0 0 0 2.407E-06 2 51144 56.599 51.601 1 NaN NaN 0 8090400 0 8090400 5372 523 2014 2071 8412;8413 8412 385 DLNSQADSLMTSSAFDTSQVK 21 1 0 Oxidation (M) _DLNSQADSLM(ox)TSSAFDTSQVK_ DLNSQADSLM(1)TSSAFDTSQVK DLNSQADSLM(67.42)TSSAFDTSQVK 0 1 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1135.0193 2 1131.01554 2260.01652 60433.64 0.14964 0.00016925 0.025915 2.931E-05 0.17556 0.00019856 1131.51691519596 1135.02234284027 84.613 0.41917 84.613 84.343 84.762 0 85 34 5 0 0 0 5.0643E-08 1 51875 67.416 61.385 1 2.1182 2.1576 0 12304000 3028800 9274700 5373 523 2014 2071 8414 8414 385 DLNSYLEDK 9 1 0 Unmodified _DLNSYLEDK_ 0 0 0 H0YAL7;D6RBD7;C9J1V9;O43324 H0YAL7 H0YAL7 EEF1E1;EEF1E1-BLOC1S5 Eukaryotic translation elongation factor 1 epsilon-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.7693 2 548.761486 1095.50842 NaN NaN NaN 1.7023 0.00093415 NaN NaN NaN NaN 68.069 0.67806 68.069 67.835 68.513 0 0 0 0 0.011808 1 40508 65.305 38.168 1 NaN NaN 0 6852800 0 6852800 5374 1127 2015 2072 8415 8415 DLNWIHVQDAEEAWK 15 1 0 Unmodified _DLNWIHVQDAEEAWK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.9675 3 618.632081 1852.87441 80162.9 0.60838 0.00037636 0.16037 9.9209E-05 0.76875 0.00047557 618.632184453171 621.303170928188 106.31 0.54308 106.31 106.04 106.58 0 146 38 6 0 0 0 0.00069388 2 65938 45.438 38.207 1 0.64635 0.65702 0 10307000 5416400 4890200 5375 1421 2016 2073 8416;8417 8416 DLNWIHVQDAEEAWK 15 1 0 Unmodified _DLNWIHVQDAEEAWK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.9671 3 618.632081 1852.87441 78663.35 0.37898 0.00023445 0.013006 8.0457E-06 0.39199 0.0002425 618.966563905039 621.303086767354 105.57 0.42847 105.57 105.36 105.79 7.6294E-06 155 29 7 0 0 0 0.00020845 2 67009 52.372 48.27 1 0.63179 0.64791 0 11787000 6146700 5640700 5376 1421 2016 2073 8418;8419 8418 DLNWIHVQDAEEAWK 15 1 0 Unmodified _DLNWIHVQDAEEAWK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.9667 3 618.632081 1852.87441 76883.7 0.32177 0.00019906 0.13095 8.1012E-05 0.45272 0.00028007 618.966377987784 621.303637999672 116.93 0.46861 116.93 116.69 117.16 0 105 17 8 0 0 0 0.0012626 2 68761 40.187 35.944 1 1.2956 1.0304 0 9969200 4011800 5957400 5377 1421 2016 2073 8420;8421 8420 DLNWIHVQDAEEAWK 15 1 0 Unmodified _DLNWIHVQDAEEAWK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.3052 3 618.632081 1852.87441 78358.59 0.62581 0.00038715 0.1061 6.564E-05 0.73192 0.00045279 618.631885674066 621.303774787754 116.78 0.44962 116.78 116.57 117.02 7.6294E-06 107 19 7 0 0 0 0.00023068 2 67723 50.827 44.923 1 1.0662 0.87011 0 6306900 3257400 3049500 5378 1421 2016 2073 8422;8423 8423 DLNYCFSGMSDHR 13 0 1 Oxidation (M) _DLNYCFSGM(ox)SDHR_ DLNYCFSGM(1)SDHR DLNYCFSGM(88.6)SDHR 0 1 0 E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;P55795;B4DFK9;B4DP00 E9PCY7;P55795 E9PCY7 HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.3244 2 809.324664 1616.63478 68559.03 0.66694 0.00053977 -0.12823 -0.00010378 0.53871 0.00043599 809.324788703099 814.328972643229 48.94 0.57713 48.94 48.627 49.204 0 132 43 7 0 0 0 7.1664E-05 1 26673 88.596 85.864 1 1.3587 1.3785 0 28850000 11931000 16919000 5379 1231;1617 2017 2074 8424 8424 945 DLNYCFSGMSDHR 13 0 1 Oxidation (M) _DLNYCFSGM(ox)SDHR_ DLNYCFSGM(1)SDHR DLNYCFSGM(57.02)SDHR 0 1 0 E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;P55795;B4DFK9;B4DP00 E9PCY7;P55795 E9PCY7 HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.8297 2 809.324664 1616.63478 NaN NaN NaN -0.3079 -0.00024919 NaN NaN NaN NaN 48.838 0.28138 48.838 48.612 48.894 0 0 0 0 0.0017499 1 26597 57.019 51.706 1 NaN NaN 0 12348000 0 12348000 5380 1231;1617 2017 2074 8425 8425 945 DLNYCFSGMSDHR 13 0 1 Oxidation (M) _DLNYCFSGM(ox)SDHR_ DLNYCFSGM(1)SDHR DLNYCFSGM(65.04)SDHR 0 1 0 E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;P55795;B4DFK9;B4DP00 E9PCY7;P55795 E9PCY7 HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.8856 3 539.885535 1616.63478 80842.48 0.59331 0.00032032 -0.32484 -0.00017537 0.26847 0.00014495 539.885410890019 543.22159786234 47.529 0.37837 47.529 47.34 47.718 0 123 26 8 0 0 0 7.9122E-05 2 26441 65.043 64.851 1 1.959 2.1902 0 44631000 13710000 30921000 5381 1231;1617 2017 2074 8426;8427 8427 945 DLNYCFSGMSDHR 13 0 1 Oxidation (M) _DLNYCFSGM(ox)SDHR_ DLNYCFSGM(1)SDHR DLNYCFSGM(110.66)SDHR 0 1 0 E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;P55795;B4DFK9;B4DP00 E9PCY7;P55795 E9PCY7 HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.3254 2 809.324664 1616.63478 66906.46 0.57578 0.00046599 -0.32262 -0.0002611 0.25316 0.00020489 809.826165441208 814.328742484629 47.526 0.35456 47.526 47.34 47.694 0 99 24 7 0 0 0 7.8221E-07 2 26416 110.66 108.72 1 1.8957 2.1787 0 77191000 25503000 51688000 5382 1231;1617 2017 2074 8428;8429 8429 945 DLPDVQELITQVR 13 0 1 Unmodified _DLPDVQELITQVR_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.4191 2 763.414662 1524.81477 69956.96 1.031 0.00078706 0.42324 0.00032311 1.4542 0.0011102 763.415163339461 768.419083881846 123.17 0.69517 123.17 122.86 123.55 0 202 53 6 0 0 0 0.00034597 1 79975 63.408 63.408 1 0.89195 0.90043 0 15507000 7943600 7563800 5383 2101 2018 2075 8430 8430 DLPDVQELITQVR 13 0 1 Unmodified _DLPDVQELITQVR_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.4194 2 763.414662 1524.81477 69639.57 1.0121 0.00077267 0.31783 0.00024264 1.33 0.0010153 763.41502486704 768.418933407206 122.75 0.56682 122.75 122.49 123.05 0 206 44 7 0 0 0 6.6973E-07 1 81429 111.86 111.86 1 0.93402 0.95162 0 20590000 10685000 9905300 5384 2101 2018 2075 8431 8431 DLPEHAVLK 9 1 0 Unmodified _DLPEHAVLK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.2874 2 511.287474 1020.5604 83023.01 0.67126 0.00034321 -0.61036 -0.00031207 0.060907 3.1141E-05 511.286932065047 515.294143106245 41.657 1.306 41.657 41.138 42.444 0 504 103 10 0 0 0 0.002013 1 21935 77.923 50.668 1 1.3801 1.6421 0 610080000 249600000 360480000 5385 999 2019 2076 8432 8432 DLPEHAVLK 9 1 0 Unmodified _DLPEHAVLK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.2952 2 511.287474 1020.5604 83306.27 0.52892 0.00027043 -0.35108 -0.0001795 0.17785 9.0932E-05 511.286974716179 515.294206778938 40.36 0.7403 40.36 39.971 40.711 3.8147E-06 321 46 9 0 0 0 0.0025185 1 21510 74.127 56.888 1 1.3322 1.5704 0 658880000 289750000 369130000 5386 999 2019 2076 8433 8433 DLPEHAVLK 9 1 0 Unmodified _DLPEHAVLK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.2873 2 511.287474 1020.5604 81305.34 0.22535 0.00011522 -0.34863 -0.00017825 -0.12328 -6.3031E-05 511.286810829121 515.294564060336 47.209 1.338 47.209 46.659 47.997 0 345 96 5 0 0 0 0.0042933 2 22756 69.628 69.628 1 0.80945 0.64564 0 19970000 10843000 9127000 5387 999 2019 2076 8434;8435 8434 DLPEHAVLK 9 1 0 Unmodified _DLPEHAVLK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.2941 2 511.287474 1020.5604 82612.38 0.054296 2.7761E-05 -0.11555 -5.9078E-05 -0.061251 -3.1317E-05 511.286834738563 515.294736874385 47.257 1.5364 47.257 46.677 48.213 0 386 121 5 0 0 0 0.0015079 1 22391 84.498 70.341 1 0.82689 0.66271 0 19679000 10378000 9300500 5388 999 2019 2076 8436 8436 DLPERDQFR 9 0 2 Unmodified _DLPERDQFR_ 0 0 1 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.3018 2 588.293819 1174.57309 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.359 1 33.359 32.859 33.859 0 0 0 0 0.0076899 1 16608 87.308 31.631 1 5389 2073 2020 2077 8437 8437 DLPERDQFR 9 0 2 Unmodified _DLPERDQFR_ 0 0 1 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.3022 2 588.293819 1174.57309 76400.01 0.8792 0.00051723 -0.20801 -0.00012237 0.6712 0.00039486 588.293635784983 598.301797348153 32.683 0.4924 32.683 32.419 32.912 0 138 45 5 0 0 0 7.0105E-05 1 16212 124.23 124.23 1 0.68077 0.77584 0 40372000 21985000 18387000 5390 2073 2020 2077 8438 8438 DLPFETLEVEAK 12 1 0 Unmodified _DLPFETLEVEAK_ 0 0 0 C9JG87;Q9NYK5 C9JG87 C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.866 2 695.858657 1389.70276 NaN NaN NaN -0.19963 -0.00013891 NaN NaN NaN NaN 111.26 0.46878 111.26 111.05 111.52 0 0 0 0 0.0011759 2 70022 81.017 62.038 1 NaN NaN 0 7127100 0 7127100 5391 1134 2021 2078 8439;8440 8439 DLPFETLEVEAK 12 1 0 Unmodified _DLPFETLEVEAK_ 0 0 0 C9JG87;Q9NYK5 C9JG87 C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.8666 2 695.858657 1389.70276 75353.24 0.71517 0.00049766 -0.089554 -6.2317E-05 0.62562 0.00043534 696.359676289679 699.865756715615 110.73 0.63892 110.73 110.31 110.95 0 128 48 5 0 0 0 0.00021804 2 71347 82.417 82.417 1 1.3855 1.428 0 9614500 4110800 5503600 5392 1134 2021 2078 8441;8442 8442 DLPFVEEIK 9 1 0 Unmodified _DLPFVEEIK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.3016 2 545.294965 1088.57538 83856.03 1.1151 0.00060807 -0.062508 -3.4085E-05 1.0526 0.00057399 545.294998410993 549.301723453417 108.65 0.63779 108.65 108.41 109.05 0 185 43 6 0 0 0 0.0091583 3 68037 60.436 52.482 1 1.1084 1.0872 0 22699000 12206000 10493000 5393 1795 2022 2079 8443;8444;8445 8444 DLPFVEEIK 9 1 0 Unmodified _DLPFVEEIK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.2944 2 545.294965 1088.57538 82105.78 0.58704 0.00032011 -0.20829 -0.00011358 0.37876 0.00020653 545.294748936324 549.301890595498 108.11 0.71251 108.11 107.82 108.54 7.6294E-06 197 50 5 0 0 0 0.0091583 2 69017 60.436 60.436 1 1.0267 1.0379 0 16392000 7566800 8825500 5394 1795 2022 2079 8446;8447 8446 DLPIPGTISSAGDGNSESR 19 0 1 Unmodified _DLPIPGTISSAGDGNSESR_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 937.4503 2 936.950326 1871.8861 67080.88 0.42075 0.00039422 0.55155 0.00051677 0.9723 0.000911 936.950831640462 942.456750038655 102.54 0.34469 102.54 102.3 102.65 0 69 23 6 0 0 0 0.059442 1 57308 20.427 20.427 1 1.3514 1.1958 0 2421100 1149000 1272100 5395 476 2023 2080 8448 8448 DLPLAQGIK 9 1 0 Unmodified _DLPLAQGIK_ 0 0 0 A0A1B0GTY9;A0A140T9V3;A0A1B0GTG2;A0A1B0GW77;P49419;A0A1B0GV49;A0A1B0GTJ4 A0A1B0GTY9 A0A1B0GTY9 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.7912 2 477.784567 953.554582 NaN NaN NaN 0.44994 0.00021497 NaN NaN NaN NaN 78.125 0.48462 78.125 77.848 78.333 0 0 0 0 0.051865 1 46171 46.426 20.689 1 NaN NaN 0 5083500 0 5083500 5396 598 2024 2081 8449 8449 DLPLLLFR 8 0 1 Unmodified _DLPLLLFR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3;Q96RV7;Q96RV6 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.8056 2 493.805303 985.596052 85078.41 0.49817 0.000246 0.023385 1.1548E-05 0.52156 0.00025755 493.805243689207 498.809359524858 128.66 0.58592 128.66 128.34 128.93 0 171 38 9 0 0 0 0.0088507 2 83856 76.847 53.917 1 3.1127 3.1928 0 25839000 7006800 18832000 5397 1382 2025 2082 8450;8451 8451 DLPLLLFR 8 0 1 Unmodified _DLPLLLFR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3;Q96RV7;Q96RV6 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.0279 2 493.805303 985.596052 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.94 1 128.94 128.44 129.44 0 0 0 0 0.038943 1 84100 58.604 37.979 1 5398 1382 2025 2082 8452 8452 DLPLLLFR 8 0 1 Unmodified _DLPLLLFR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3;Q96RV7;Q96RV6 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.8054 2 493.805303 985.596052 86162.37 0.37851 0.00018691 0.15828 7.816E-05 0.53679 0.00026507 493.805269307151 498.809426479686 128.26 0.55766 128.26 127.96 128.51 0 173 36 7 0 0 0 0.0048051 2 85718 92.467 58.728 1 2.9577 3.2327 0 36372000 10216000 26156000 5399 1382 2025 2082 8453;8454 8454 DLPLNELEVAK 11 1 0 Unmodified _DLPLNELEVAK_ 0 0 0 REV__Q5THJ4 REV__Q5THJ4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.8501 2 620.84281 1239.67107 NaN NaN NaN -0.39435 -0.00024483 NaN NaN NaN NaN 58.602 0.24069 58.602 58.492 58.732 -3.8147E-06 0 0 0 0.015675 1 34045 54.416 54.416 1 NaN NaN 0 14276000 0 14276000 + 5400 2180 2026 2083 8455 8455 DLPNALDEK 9 1 0 Unmodified _DLPNALDEK_ 0 0 0 B4DQT8;A0A024R2D4;B4E1J8;Q9NVJ2 B4DQT8 B4DQT8 ARL8B ADP-ribosylation factor-like protein 8B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.7671 2 507.758746 1013.50294 NaN NaN NaN 0.13865 7.0403E-05 NaN NaN NaN NaN 54.438 0.59962 54.438 53.956 54.556 0 0 0 0 0.0085335 1 30578 67.993 50.607 1 NaN NaN 0 5966100 0 5966100 5401 109 2027 2084 8456 8456 DLPRPSEVNETILRPLNVEPPLTDLQK 27 1 2 Unmodified _DLPRPSEVNETILRPLNVEPPLTDLQK_ 0 0 2 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.9255 4 771.673842 3082.66626 68767.33 0.68065 0.00052524 0.24809 0.00019144 0.92874 0.00071669 771.924752192162 778.930726739011 127.32 0.66405 127.32 127.04 127.7 0 122 26 9 0 0 0 0.055918 1 76739 13.702 11.46 1 0.89225 0.83547 0 8381900 4222500 4159500 5402 957 2028 2085 8457 8457 DLPVTEAVFSALVTGHAR 18 0 1 Unmodified _DLPVTEAVFSALVTGHAR_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.6754 3 628.338897 1881.99486 76666.77 0.88929 0.00055877 -0.22051 -0.00013855 0.66878 0.00042022 628.672981915125 631.674919338917 126.46 0.56158 126.46 126.17 126.73 -7.6294E-06 240 41 8 0 0 0 0.00016891 2 82184 30.428 30.428 1 2.1937 2.2641 0 20003000 4973600 15030000 5403 1207 2029 2086 8458;8459 8459 DLPVTEAVFSALVTGHAR 18 0 1 Unmodified _DLPVTEAVFSALVTGHAR_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.0053 2 942.004707 1881.99486 63349.87 0.83442 0.00078602 -0.60746 -0.00057223 0.22696 0.0002138 942.004049562927 947.00899360808 126.44 0.42467 126.44 126.25 126.67 0 165 32 7 0 0 0 3.5342E-05 1 82296 62.891 62.891 1 1.7483 1.7741 0 9814500 3452300 6362100 5404 1207 2029 2086 8460 8460 DLPVTEAVFSALVTGHAR 18 0 1 Unmodified _DLPVTEAVFSALVTGHAR_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3398 3 628.338897 1881.99486 76604.81 1.0278 0.00064578 0.031224 1.962E-05 1.059 0.0006654 628.33896907694 631.674883442234 126.06 0.70966 126.06 125.67 126.38 0 201 43 8 0 0 0 1.2782E-05 2 83881 49.224 45.256 1 2.0765 2.237 0 25887000 7659800 18227000 5405 1207 2029 2086 8461;8462 8462 DLQANVEHLVQK 12 1 0 Unmodified _DLQANVEHLVQK_ 0 0 0 A0A024R0Y5;P08237;Q96I60;A0A0S2Z4I1;B4E162;A0A0S2Z4A8;Q7KYX9 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.3832 2 697.37534 1392.73613 71807.3 0.83652 0.00058337 0.41938 0.00029246 1.2559 0.00087583 697.375330385303 701.382469693867 75.244 0.55556 75.244 74.892 75.448 0 195 44 6 0 0 0 1.0149E-18 1 44090 149.49 149.49 1 2.6186 2.8185 0 38353000 10716000 27637000 5406 61 2030 2087 8463 8463 DLQANVEHLVQK 12 1 0 Unmodified _DLQANVEHLVQK_ 0 0 0 A0A024R0Y5;P08237;Q96I60;A0A0S2Z4I1;B4E162;A0A0S2Z4A8;Q7KYX9 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.3757 2 697.37534 1392.73613 72583.34 0.70044 0.00048847 -0.17231 -0.00012016 0.52813 0.00036831 697.375406572089 701.382304391661 74.001 0.67529 74.001 73.711 74.386 0 225 55 7 0 0 0 4.2479E-30 2 44471 174.57 174.57 1 2.3099 2.5627 0 48337000 12538000 35799000 5407 61 2030 2087 8464;8465 8464 DLQDELAGNSEQR 13 0 1 Unmodified _DLQDELAGNSEQR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.8481 2 737.842059 1473.66956 71335.98 0.81333 0.00060011 0.56019 0.00041333 1.3735 0.0010134 737.8424571212 742.846631389647 55.377 0.50417 55.377 55.232 55.736 -3.8147E-06 157 42 5 0 0 0 0.00020629 1 31164 70.195 53.817 1 0.69505 0.7158 0 24713000 15017000 9695400 5408 803 2031 2088 8466 8466 DLQDELAGNSEQR 13 0 1 Unmodified _DLQDELAGNSEQR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3427 2 737.842059 1473.66956 70487.37 0.80807 0.00059623 -0.12954 -9.5577E-05 0.67854 0.00050065 737.841844520566 742.846290422524 54.715 0.60175 54.715 54.39 54.992 0 161 50 4 0 0 0 0.00013111 3 31428 73.848 63.391 1 0.8643 0.87027 0 19424000 9066600 10358000 5409 803 2031 2088 8467;8468;8469 8468 DLQDELAGNSEQR 13 0 1 Unmodified _DLQDELAGNSEQR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.3497 2 737.842059 1473.66956 70303.22 0.41431 0.0003057 0.14825 0.00010939 0.56256 0.00041508 738.3433099311 742.846399088574 63.96 0.94249 63.96 63.362 64.304 0 320 82 6 0 0 0 0.014455 1 32818 37.144 26.912 1 0.72711 0.60798 0 3696000 2381200 1314800 5410 803 2031 2088 8470 8470 DLQDELAGNSEQR 13 0 1 Unmodified _DLQDELAGNSEQR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.8419 2 737.842059 1473.66956 70187.79 0.43869 0.00032368 0.63323 0.00046723 1.0719 0.00079091 738.342999354177 742.847679391034 64.77 1.3782 64.77 63.93 65.308 0 296 110 6 0 0 0 0.0024869 2 32633 53.557 45.333 1 0.96289 0.82346 0 3271500 1489500 1782000 5411 803 2031 2088 8471;8472 8472 DLQHPNEFIR 10 0 1 Unmodified _DLQHPNEFIR_ 0 0 0 P53618;E9PP73;E9PP63;E9PKQ1 P53618 P53618 COPB1 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.8244 2 634.822744 1267.63093 78920.43 0.67857 0.00043077 0.39281 0.00024936 1.0714 0.00068013 634.823025863621 639.826987129228 55.804 0.38261 55.804 55.548 55.931 0 79 27 4 0 0 0 0.0043789 1 31331 61.593 45.396 1 1.6055 1.6431 0 14524000 6037800 8485900 5412 1606 2032 2089 8473 8473 DLQHPNEFIR 10 0 1 Unmodified _DLQHPNEFIR_ 0 0 0 P53618;E9PP73;E9PP63;E9PKQ1 P53618 P53618 COPB1 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8267 2 634.822744 1267.63093 77240.28 0.60053 0.00038123 -0.17045 -0.00010821 0.43008 0.00027302 635.323886246114 639.826747540425 54.708 0.34129 54.708 54.513 54.854 0 77 29 4 0 0 0 0.00013049 3 31306 96.342 81.668 1 1.4878 1.4848 0 16713000 5376100 11337000 5413 1606 2032 2089 8474;8475;8476 8475 DLQIEVQEELKR 12 1 1 Unmodified _DLQIEVQEELKR_ 0 0 1 E7ETD6;Q12830;Q9H5E0;J3QQQ8;J3KSK9;E9PE19;B4DJV8 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.4199 2 750.406837 1498.79912 NaN NaN NaN 0.91911 0.0006897 NaN NaN NaN NaN 90.162 0.24091 90.162 90.053 90.294 0 0 0 0 0.043963 1 49114 42.718 30.852 1 NaN NaN 0 1167900 0 1167900 5414 1224 2033 2090 8477 8477 DLQMVNISLR 10 0 1 Oxidation (M) _DLQM(ox)VNISLR_ DLQM(1)VNISLR DLQM(130.66)VNISLR 0 1 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.8256 2 602.821355 1203.62816 78197.96 1.0396 0.0006267 0.041953 2.529E-05 1.0816 0.00065199 602.821414991333 607.825716544171 84.317 0.99995 84.317 83.713 84.713 -7.6294E-06 201 80 6 0 0 0 8.3136E-10 2 50467 130.66 68.456 1 2.0046 2.3592 0 233690000 71123000 162570000 5415 1328 2034 2091 8478;8479 8478 1003 DLQMVNISLR 10 0 1 Oxidation (M) _DLQM(ox)VNISLR_ DLQM(1)VNISLR DLQM(98.05)VNISLR 0 1 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7 J3KPX7 J3KPX7 PHB2 Prohibitin-2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.3237 2 602.821355 1203.62816 NaN NaN NaN 0.93065 0.00056101 NaN NaN NaN NaN 84.021 0.52234 84.021 83.657 84.179 0 0 0 0 2.6296E-05 1 50203 98.048 45.332 1 NaN NaN 0 42610000 42610000 0 5416 1328 2034 2091 8480 8480 1003 DLQMVNISLR 10 0 1 Oxidation (M) _DLQM(ox)VNISLR_ DLQM(1)VNISLR DLQM(140.75)VNISLR 0 1 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.8258 2 602.821355 1203.62816 77070.74 0.51763 0.00031204 0.75611 0.0004558 1.2737 0.00076784 602.821777577569 607.825866278044 83.095 0.46948 83.095 82.771 83.241 -7.6294E-06 179 36 7 0 0 0 4.007E-12 2 50841 140.75 78.554 1 2.3339 2.6559 0 113600000 37266000 76330000 5417 1328 2034 2091 8481;8482 8482 1003 DLQMVNISLR 10 0 1 Oxidation (M) _DLQM(ox)VNISLR_ DLQM(1)VNISLR DLQM(71.61)VNISLR 0 1 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.8496 2 602.821355 1203.62816 76906.46 0.74469 0.00044892 0.20342 0.00012262 0.94811 0.00057154 602.821635732376 607.825597971101 83.47 0.64849 83.47 83.158 83.807 0 210 48 6 0 0 0 0.050538 1 51046 71.614 25.934 1 2.2929 2.63 0 180810000 59890000 120920000 5418 1328 2034 2091 8483 8483 1003 DLQMVNISLR 10 0 1 Oxidation (M) _DLQM(ox)VNISLR_ DLQM(1)VNISLR DLQM(69.28)VNISLR 0 1 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.8262 2 602.821355 1203.62816 79728.67 0.74362 0.00044827 0.10511 6.3365E-05 0.84874 0.00051164 602.821733323898 607.82540787993 96.005 0.59963 96.005 95.74 96.34 0 139 37 6 0 0 0 0.0011612 1 53815 69.275 29.208 1 1.6173 1.3691 0 4977200 1732200 3245100 5419 1328 2034 2091 8484 8484 1003 DLQMVNISLR 10 0 1 Oxidation (M) _DLQM(ox)VNISLR_ DLQM(1)VNISLR DLQM(51.95)VNISLR 0 1 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8212 2 602.821355 1203.62816 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.38 1 115.38 114.88 115.88 0 0 0 0 0.011812 1 67599 51.949 16.511 1 5420 1328 2034 2091 8485 8485 1003 DLQMVNISLR 10 0 1 Oxidation (M) _DLQM(ox)VNISLR_ DLQM(1)VNISLR DLQM(43.77)VNISLR 0 1 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7 J3KPX7 J3KPX7 PHB2 Prohibitin-2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.8221 2 602.821355 1203.62816 NaN NaN NaN 1.0577 0.00063758 NaN NaN NaN NaN 95.628 0.48721 95.628 95.427 95.914 0 0 0 0 0.019149 1 52814 43.77 9.5171 1 NaN NaN 0 1357700 1357700 0 5421 1328 2034 2091 8486 8486 1003 DLQMVNISLR 10 0 1 Oxidation (M) _DLQM(ox)VNISLR_ DLQM(1)VNISLR DLQM(86.62)VNISLR 0 1 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.8259 2 602.821355 1203.62816 78599.64 0.41387 0.00024949 0.33772 0.00020359 0.75159 0.00045308 602.821736849113 607.825468225868 95.989 0.58121 95.989 95.763 96.344 -7.6294E-06 119 38 6 0 0 0 0.045005 1 52886 86.624 46.623 1 1.8816 1.5963 0 3082700 1094600 1988000 5422 1328 2034 2091 8487 8487 1003 DLQMVNISLR 10 0 1 Unmodified _DLQMVNISLR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.8284 2 594.823898 1187.63324 80757.57 0.90275 0.00053698 -0.44878 -0.00026694 0.45397 0.00027003 594.824436772159 599.827992680652 115.34 0.41724 115.34 115.1 115.51 0 60 18 5 0 0 0 0.0019426 2 67491 71.349 31.282 1 2.4881 2.1547 0 2570200 521350 2048800 5423 1328 2034 2092 8488;8489 8488 DLQNVNITLR 10 0 1 Unmodified _DLQNVNITLR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0;A8K9G2 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.3373 2 593.332944 1184.65134 77821.96 0.82146 0.0004874 0.063652 3.7767E-05 0.88511 0.00052517 593.332969255211 598.3371932156 83.035 1.0211 83.035 82.495 83.516 0 455 85 8 0 0 0 2.1513E-22 2 49625 168.83 142.44 1 1.4539 1.7094 0 229050000 89732000 139310000 5424 730 2035 2093 8490;8491 8491 DLQNVNITLR 10 0 1 Unmodified _DLQNVNITLR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0;A8K9G2 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3332 2 593.332944 1184.65134 77231.32 0.55966 0.00033206 -0.047336 -2.8086E-05 0.51232 0.00030398 593.332999264009 598.337127422969 82.098 1.1401 82.098 81.449 82.589 0 402 98 8 0 0 0 6.8608E-12 2 50140 142.43 119.69 1 1.3862 1.6126 0 403690000 146950000 256740000 5425 730 2035 2093 8492;8493 8493 DLQNVNITLR 10 0 1 Unmodified _DLQNVNITLR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0;A8K9G2 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.3331 2 593.332944 1184.65134 77506.86 0.6483 0.00038466 -0.24765 -0.00014694 0.40065 0.00023772 593.332878839247 598.337075851164 94.667 1.2817 94.667 94.297 95.578 0 295 86 7 0 0 0 4.0917E-06 1 52954 109.66 94.997 1 2.605 2.1728 0 22993000 6395000 16598000 5426 730 2035 2093 8494 8494 DLQNVNITLR 10 0 1 Unmodified _DLQNVNITLR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0;A8K9G2 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.3331 2 593.332944 1184.65134 77898.78 0.65912 0.00039108 -0.29201 -0.00017326 0.36711 0.00021782 593.33281289574 598.33706033348 94.667 1.0546 94.667 94.126 95.181 0 271 67 7 0 0 0 0.00074284 2 52079 81.95 71.143 1 2.8908 2.4417 0 17938000 4672000 13266000 5427 730 2035 2093 8495;8496 8495 DLQPFPTCQALVYR 14 0 1 Unmodified _DLQPFPTCQALVYR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 854.9315 2 854.42979 1706.84503 66283.5 0.84716 0.00072384 -0.18078 -0.00015446 0.66639 0.00056938 854.429760289531 859.433810614686 107.06 0.64638 107.06 106.74 107.39 0 258 49 7 0 0 0 1.9515E-05 2 66553 97.734 97.734 1 0.78547 0.82 0 38658000 21855000 16804000 5428 1726 2036 2094 8497;8498 8497 DLQPFPTCQALVYR 14 0 1 Unmodified _DLQPFPTCQALVYR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.4351 2 854.42979 1706.84503 65462.75 0.94849 0.00081042 -0.38172 -0.00032616 0.56677 0.00048426 854.4297285142 859.433659242504 106.51 0.57993 106.51 106.22 106.8 7.6294E-06 276 43 8 0 0 0 0.0010642 2 67724 56.359 56.359 1 0.80123 0.89307 0 43900000 23222000 20678000 5429 1726 2036 2094 8499;8500 8500 DLQPFPTCQALVYR 14 0 1 Unmodified _DLQPFPTCQALVYR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 854.9315 2 854.42979 1706.84503 64704.04 0.90938 0.000777 0.10227 8.7384E-05 1.0117 0.00086439 854.429887167227 859.433815808025 117.99 0.72876 117.99 117.63 118.36 0 224 30 11 0 0 0 2.4473E-06 2 69555 105.46 105.46 1 1.2059 1.0195 0 30321000 13244000 17077000 5430 1726 2036 2094 8501;8502 8502 DLQPFPTCQALVYR 14 0 1 Unmodified _DLQPFPTCQALVYR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 859.4349 2 854.42979 1706.84503 64448.82 0.53221 0.00045474 0.44712 0.00038204 0.97933 0.00083677 854.430105400732 859.43402206675 117.84 1.0051 117.84 117.3 118.31 0 222 46 9 0 0 0 0.00021373 2 68499 67.385 67.385 1 1.1928 1.0405 0 32827000 15105000 17722000 5431 1726 2036 2094 8503;8504 8503 DLQSNVEHLTEK 12 1 0 Unmodified _DLQSNVEHLTEK_ 0 0 0 Q01813;Q8WTZ9;O14943;B1APP8 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.8549 2 706.854438 1411.69432 72489.95 0.61489 0.00043464 0.066331 4.6886E-05 0.68122 0.00048152 706.854572227072 710.861555138515 58.739 0.71352 58.739 58.447 59.16 -3.8147E-06 281 57 8 0 0 0 1.5783E-22 3 33285 152.47 111.75 1 2.1584 2.4337 0 129850000 42511000 87334000 5432 1677 2037 2095 8505;8506;8507 8507 DLQSNVEHLTEK 12 1 0 Unmodified _DLQSNVEHLTEK_ 0 0 0 Q01813;Q8WTZ9;O14943;B1APP8 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.8548 2 706.854438 1411.69432 72119.15 0.67551 0.00047748 -0.41772 -0.00029527 0.25779 0.00018222 706.854587848329 710.861466129994 57.517 0.94571 57.517 56.962 57.907 0 278 73 8 0 0 0 7.1867E-05 1 33238 97.439 59.146 1 2.3187 2.5925 0 107040000 32584000 74456000 5433 1677 2037 2095 8508 8508 DLRPSALPFVASLIR 15 0 2 Unmodified _DLRPSALPFVASLIR_ 0 0 1 F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 F2Z2U4 F2Z2U4 TRRAP Transformation/transcription domain-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.6608 3 552.326152 1653.95663 85344.66 1.0405 0.00057468 -0.48615 -0.00026851 0.55431 0.00030616 552.660323112025 558.998341350833 126.57 0.32436 126.57 126.41 126.73 0 76 23 6 0 0 0 0.00030946 2 82327 52.522 49.661 1 0.54132 0.61992 0 2804400 1474800 1329500 5434 1253 2038 2096 8509;8510 8509 DLRPSALPFVASLIR 15 0 2 Unmodified _DLRPSALPFVASLIR_ 0 0 1 F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 F2Z2U4 F2Z2U4 TRRAP Transformation/transcription domain-associated protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.3265 3 552.326152 1653.95663 NaN NaN NaN -0.46046 -0.00025432 NaN NaN NaN NaN 126.09 0.30128 126.09 125.91 126.21 0 0 0 0 0.0023853 1 84002 63.128 58.145 1 NaN NaN 0 5626000 5626000 0 5435 1253 2038 2096 8511 8511 DLSDAIEQTFQR 12 0 1 Unmodified _DLSDAIEQTFQR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.8465 2 711.846613 1421.67867 75207.65 0.8236 0.00058628 -0.168 -0.00011959 0.6556 0.00046669 711.846635422423 716.85035857214 106.17 0.6766 106.17 105.79 106.47 0 180 47 5 0 0 0 1.6336E-29 2 65816 170.99 170.99 1 0.48374 0.4908 0 15094000 9471700 5622600 5436 1233 2039 2097 8512;8513 8513 DLSDAIEQTFQR 12 0 1 Unmodified _DLSDAIEQTFQR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.3489 2 711.846613 1421.67867 73303.55 0.70413 0.00050123 -0.3788 -0.00026965 0.32533 0.00023158 711.84660491847 716.850813989267 105.65 0.71436 105.65 105.29 106.01 0 209 50 6 0 0 0 7.3166E-14 2 66999 137.46 137.46 1 0.65851 0.69751 0 23743000 12535000 11207000 5437 1233 2039 2097 8514;8515 8514 DLSDAIEQTFQR 12 0 1 Unmodified _DLSDAIEQTFQR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 711.8469 2 711.846613 1421.67867 71976.98 0.63113 0.00044927 -0.27278 -0.00019418 0.35835 0.00025509 711.84660955772 716.850486013133 117.28 0.58018 117.28 117 117.58 -7.6294E-06 135 25 7 0 0 0 1.5477E-22 2 69047 152.67 152.67 1 1.2637 1.0324 0 14136000 6103000 8032700 5438 1233 2039 2097 8516;8517 8517 DLSDAIEQTFQR 12 0 1 Unmodified _DLSDAIEQTFQR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.8477 2 711.846613 1421.67867 72200.16 0.63147 0.00044951 -0.024303 -1.73E-05 0.60716 0.00043221 711.846720600138 716.850569018768 117.25 0.87295 117.25 116.97 117.84 0 166 41 8 0 0 0 0.00018123 2 68045 90.685 85.745 1 1.4856 1.2119 0 12807000 5022200 7784700 5439 1233 2039 2097 8518;8519 8519 DLSELGSVR 9 0 1 Unmodified _DLSELGSVR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.2592 2 488.258914 974.503274 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.823 1 62.823 62.323 63.323 0 0 0 0 0.041169 1 36865 49.418 13.023 1 5440 1754 2040 2098 8520 8520 DLSGGLGGQEEEEEQR 16 0 1 Unmodified _DLSGGLGGQEEEEEQR_ 0 0 0 J3KQ70;B4DJ31;Q9C086;B8ZZ93;B8ZZH7;F8WCL7 J3KQ70 J3KQ70 INO80B-WBP1;INO80B INO80 complex subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.8877 2 866.884652 1731.75475 66800.22 0.8457 0.00073313 -0.30449 -0.00026396 0.54121 0.00046917 867.386030842376 871.888543319058 46.193 0.33263 46.193 46.046 46.379 0 73 29 4 0 0 0 0.00015275 1 24960 66.498 63.46 1 0.89506 0.91225 0 6900700 2795000 4105700 5441 985 2041 2099 8521 8521 DLSGGLGGQEEEEEQR 16 0 1 Unmodified _DLSGGLGGQEEEEEQR_ 0 0 0 J3KQ70;B4DJ31;Q9C086;B8ZZ93;B8ZZH7;F8WCL7 J3KQ70 J3KQ70 INO80B-WBP1;INO80B INO80 complex subunit B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.8909 2 866.884652 1731.75475 NaN NaN NaN -0.20126 -0.00017447 NaN NaN NaN NaN 45.324 0.16152 45.324 45.264 45.426 0 0 0 0 7.5721E-07 1 24851 90.731 76.312 1 NaN NaN 0 1898500 0 1898500 5442 985 2041 2099 8522 8522 DLSGGLGGQEEEEEQR 16 0 1 Unmodified _DLSGGLGGQEEEEEQR_ 0 0 0 J3KQ70;B4DJ31;Q9C086;B8ZZ93;B8ZZH7;F8WCL7 J3KQ70 J3KQ70 INO80B-WBP1;INO80B INO80 complex subunit B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.3921 2 866.884652 1731.75475 NaN NaN NaN -0.36468 -0.00031614 NaN NaN NaN NaN 45.457 0.066093 45.457 45.426 45.492 0 0 0 0 0.036399 1 24972 37.681 28.677 1 NaN NaN 0 941650 0 941650 5443 985 2041 2099 8523 8523 DLSGGLGGQEEEEEQR 16 0 1 Unmodified _DLSGGLGGQEEEEEQR_ 0 0 0 J3KQ70;B4DJ31;Q9C086;B8ZZ93;B8ZZH7;F8WCL7 J3KQ70 J3KQ70 INO80B-WBP1;INO80B INO80 complex subunit B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.8855 2 866.884652 1731.75475 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.371 1 45.371 44.871 45.871 0 0 0 0 0.00012763 1 24890 100.38 85.697 1 5444 985 2041 2099 8524 8524 DLSHIGDAVVISCAK 15 1 0 Unmodified _DLSHIGDAVVISCAK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.6109 3 528.939857 1583.79774 84546.75 1.0038 0.00053097 -0.037812 -2E-05 0.96603 0.00051097 529.274283874075 531.6110587685 84.296 0.54021 84.296 83.996 84.537 -7.6294E-06 164 41 5 0 0 0 0.00020383 2 50470 44.925 40.237 1 0.6417 0.68505 0 32124000 19674000 12450000 5445 1473 2042 2100 8525;8526 8526 DLSHIGDAVVISCAK 15 1 0 Unmodified _DLSHIGDAVVISCAK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.9055 2 792.906147 1583.79774 NaN NaN NaN -0.48304 -0.000383 NaN NaN NaN NaN 84.281 0.38968 84.281 84.089 84.479 7.6294E-06 0 0 0 6.1387E-07 1 50471 98.337 81.312 1 NaN NaN 0 5005900 5005900 0 5446 1473 2042 2100 8527 8527 DLSHIGDAVVISCAK 15 1 0 Unmodified _DLSHIGDAVVISCAK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.9129 2 792.906147 1583.79774 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.217 1 84.217 83.717 84.717 0 0 0 0 0.00037215 1 50456 81.676 66.411 1 5447 1473 2042 2100 8528 8528 DLSHIGDAVVISCAK 15 1 0 Unmodified _DLSHIGDAVVISCAK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.2761 3 528.939857 1583.79774 84858.1 0.39551 0.0002092 0.68545 0.00036256 1.081 0.00057176 528.940180683007 531.611467875664 83.194 0.5406 83.194 82.936 83.477 0 124 40 4 0 0 0 6.7573E-05 2 50874 63.037 63.037 1 0.67239 0.70849 0 19861000 12260000 7601000 5448 1473 2042 2100 8529;8530 8530 DLSHIGDAVVISCAK 15 1 0 Unmodified _DLSHIGDAVVISCAK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.9175 2 792.906147 1583.79774 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.145 1 83.145 82.645 83.645 0 0 0 0 0.00037215 1 50925 81.676 66.704 1 5449 1473 2042 2100 8531 8531 DLSHIGDAVVISCAK 15 1 0 Unmodified _DLSHIGDAVVISCAK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 531.6114 3 528.939857 1583.79774 84083.05 0.59326 0.0003138 0.40423 0.00021381 0.99749 0.00052761 528.939904276068 531.611217012738 96.087 0.49717 96.087 95.843 96.34 0 136 30 6 0 0 0 0.0053423 2 53826 23.481 23.481 1 0.55885 0.43583 0 3293900 2443300 850540 5450 1473 2042 2100 8532;8533 8532 DLSHIGDAVVISCAK 15 1 0 Unmodified _DLSHIGDAVVISCAK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.9073 2 792.906147 1583.79774 69629.88 0.84959 0.00067365 0.31897 0.00025291 1.1686 0.00092656 793.407875022351 796.913527441325 96.102 0.48122 96.102 95.859 96.34 0 97 29 4 0 0 0 0.014279 2 53881 36.954 36.954 1 0.58596 0.46867 0 2899000 1927700 971300 5451 1473 2042 2100 8534;8535 8535 DLSHIGDAVVISCAK 15 1 0 Unmodified _DLSHIGDAVVISCAK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.2758 3 528.939857 1583.79774 85336.52 0.27215 0.00014395 0.68077 0.00036009 0.95292 0.00050404 528.940184247075 531.611283399544 95.98 0.45422 95.98 95.733 96.187 -7.6294E-06 127 30 6 0 0 0 0.0014964 2 52988 38.028 38.028 1 0.49862 0.38826 0 3580100 2226400 1353700 5452 1473 2042 2100 8536;8537 8537 DLSLENGAHAYNR 13 0 1 Unmodified _DLSLENGAHAYNR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;K7EJL0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.3481 2 730.349854 1458.68515 73141.25 0.36 0.00026293 -0.34528 -0.00025218 0.014723 1.0753E-05 730.34986447507 735.353606789888 50.925 0.34235 50.925 50.73 51.072 0 60 19 6 0 0 0 0.034911 1 24438 32.523 32.523 1 0.99978 0.86937 0 965820 509150 456670 5453 222 2043 2101 8538 8538 DLSSEELAAFQK 12 1 0 Unmodified _DLSSEELAAFQK_ 0 0 0 Q53G19;Q9Y3B7 Q53G19 Q53G19 MRPL11 39S ribosomal protein L11, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.3348 2 669.332807 1336.65106 NaN NaN NaN 0.030699 2.0548E-05 NaN NaN NaN NaN 88.348 0.077583 88.348 88.329 88.406 0 0 0 0 0.0017796 1 53283 74.162 38.938 1 NaN NaN 0 4692600 4692600 0 5454 1785 2044 2102 8539 8539 DLSSEELAAFQK 12 1 0 Unmodified _DLSSEELAAFQK_ 0 0 0 Q53G19;Q9Y3B7 Q53G19 Q53G19 MRPL11 39S ribosomal protein L11, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3403 2 669.332807 1336.65106 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.535 1 87.535 87.035 88.035 -7.6294E-06 0 0 0 0.0010164 1 53950 73.067 51.603 1 5455 1785 2044 2102 8540 8540 DLSSEELAAFQK 12 1 0 Unmodified _DLSSEELAAFQK_ 0 0 0 Q53G19;Q9Y3B7 Q53G19 Q53G19 MRPL11 39S ribosomal protein L11, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.3336 2 669.332807 1336.65106 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.591 1 87.591 87.091 88.091 7.6294E-06 0 0 0 0.0007062 1 53987 76.943 42.411 1 5456 1785 2044 2102 8541 8541 DLSSSEPVHAK 11 1 0 Unmodified _DLSSSEPVHAK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.295 2 585.293485 1168.57242 78508.64 0.68503 0.00040094 0.14383 8.4185E-05 0.82886 0.00048513 585.293680824552 589.300404062532 22.43 0.46989 22.43 22.263 22.733 0 115 30 6 0 0 0 3.0858E-05 3 8509 110.76 96.083 1 1.083 1.1812 0 50075000 24248000 25827000 5457 780 2045 2103 8542;8543;8544 8543 DLSSSEPVHAK 11 1 0 Unmodified _DLSSSEPVHAK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.3006 2 585.293485 1168.57242 NaN NaN NaN -0.29967 -0.0001754 NaN NaN NaN NaN 22.253 0.41472 22.253 22.021 22.436 0 0 0 0 8.1754E-05 1 8266 95.09 70.935 1 NaN NaN 0 40519000 0 40519000 5458 780 2045 2103 8545 8545 DLSSSEPVHAK 11 1 0 Unmodified _DLSSSEPVHAK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.2935 2 585.293485 1168.57242 NaN NaN NaN 1.7582 0.001029 NaN NaN NaN NaN 22.274 0.41617 22.274 21.972 22.388 0 0 0 0 4.9514E-22 1 8267 143.7 95.855 1 NaN NaN 0 35839000 35839000 0 5459 780 2045 2103 8546 8546 DLSSSEPVHAK 11 1 0 Unmodified _DLSSSEPVHAK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.301 2 585.293485 1168.57242 NaN NaN NaN -0.48898 -0.0002862 NaN NaN NaN NaN 24.541 0.54801 24.541 24.37 24.918 0 0 0 0 0.001342 1 8722 83.998 59.076 1 NaN NaN 0 4358300 0 4358300 5460 780 2045 2103 8547 8547 DLSSSEPVHAK 11 1 0 Unmodified _DLSSSEPVHAK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.2934 2 585.293485 1168.57242 76549.27 0.46726 0.00027348 0.38725 0.00022665 0.8545 0.00050014 585.294406340427 589.300408558688 24.575 0.67592 24.575 24.149 24.825 0 96 33 6 0 0 0 0.0015478 2 8209 74.173 62.823 1 1.3425 1.0951 0 5941500 2402000 3539500 5461 780 2045 2103 8548;8549 8549 DLSSVQTLLTK 11 1 0 Unmodified _DLSSVQTLLTK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;Q14917 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.844 2 602.84281 1203.67107 76419.79 0.84114 0.00050707 -0.69791 -0.00042073 0.14323 8.6346E-05 602.842497036043 606.849125626884 101.7 0.90683 101.7 101.24 102.15 0 170 70 4 0 0 0 0.0014769 2 62506 67.207 49.31 1 1.6984 1.7643 0 16955000 4141300 12813000 5462 523 2046 2104 8550;8551 8551 DLSTVEALQNLK 12 1 0 Unmodified _DLSTVEALQNLK_ 0 0 0 Q53F20;Q9BTT0;E9PPH5 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.8717 2 665.864274 1329.714 74137.76 0.99171 0.00066035 0.086714 5.774E-05 1.0784 0.00071809 665.864510140515 669.871468830771 100.31 0.96149 100.31 99.882 100.84 0 418 77 7 0 0 0 2.3732E-06 2 61352 111.61 93.295 1 2.2522 2.4585 0 50549000 13971000 36578000 5463 1784 2047 2105 8552;8553 8552 DLSTVEALQNLK 12 1 0 Unmodified _DLSTVEALQNLK_ 0 0 0 Q53F20;Q9BTT0;E9PPH5 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.8719 2 665.864274 1329.714 75163.52 0.69166 0.00046055 0.3706 0.00024677 1.0623 0.00070732 665.86466763184 669.871479507022 99.612 1.0355 99.612 99.252 100.29 0 376 83 7 0 0 0 5.5939E-13 3 62723 134.25 103.99 1 2.2939 2.5883 0 63929000 16939000 46990000 5464 1784 2047 2105 8554;8555;8556 8556 DLSYCLSGMYDHR 13 0 1 Oxidation (M) _DLSYCLSGM(ox)YDHR_ DLSYCLSGM(1)YDHR DLSYCLSGM(44.86)YDHR 0 1 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.8431 2 816.84269 1631.67083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.582 1 61.582 61.082 62.082 0 0 0 0 0.011032 1 35255 44.863 38.48 1 5465 234 2048 2106 8557 8557 173 DLSYCLSGMYDHR 13 0 1 Oxidation (M) _DLSYCLSGM(ox)YDHR_ DLSYCLSGM(1)YDHR DLSYCLSGM(82.42)YDHR 0 1 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.3453 2 816.84269 1631.67083 70155.59 0.69301 0.00056608 -0.95917 -0.00078349 -0.26617 -0.00021742 816.842752199671 821.84599775095 60.028 0.38128 60.028 59.896 60.277 0 93 25 6 0 0 0 6.8762E-05 3 34961 82.417 80.476 1 1.4891 1.4606 0 13973000 5224500 8748700 5466 234 2048 2106 8558;8559;8560 8559 173 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(70)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.7516 2 507.74425 1013.47395 78079.97 0.50268 0.00025523 -0.19325 -9.8121E-05 0.30943 0.00015711 507.744344649512 511.751222333443 79.481 2.1357 79.481 78.833 80.969 0 999 188 9 0 0 0 0.0055264 4 47330 69.998 62.769 1 2.7197 3.2475 0 764760000 208750000 556010000 5467 1624;1656;1100;2186 2049 2107 8561;8562;8563;8564 8562 839 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(106.36)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1014.4819 1 1014.48122 1013.47395 60756.84 0.41945 0.00042552 0.2508 0.00025443 0.67024 0.00067995 1014.48175906358 1022.4955867965 79.703 1.2481 79.703 79.009 80.257 0 394 110 5 0 0 0 0.00036889 1 47429 106.36 99.532 1 2.8886 3.2615 0 108520000 28482000 80042000 5468 1624;1656;1100;2186 2049 2107 8565 8565 839 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(79.12)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7515 2 507.74425 1013.47395 77360.62 0.37589 0.00019086 -0.20276 -0.00010295 0.17313 8.7907E-05 507.744434719427 511.751266048537 78.621 2.4132 78.621 77.807 80.22 0 1002 184 9 0 0 0 0.0040332 4 47911 79.116 70.343 1 2.7215 3.2177 0 1590000000 413120000 1176900000 5469 1624;1656;1100;2186 2049 2107 8566;8567;8568;8569 8568 839 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(51.43)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1023.4944 1 1014.48122 1013.47395 59139.83 0.35313 0.00035825 -0.25331 -0.00025698 0.099821 0.00010127 1014.48145528522 1022.49549803803 78.622 1.3341 78.622 78.183 79.517 0 473 115 7 0 0 0 0.0066776 1 48015 51.43 43.498 1 2.7422 3.1841 0 225980000 59866000 166110000 5470 1624;1656;1100;2186 2049 2107 8570 8570 839 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(67.03)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.7512 2 507.74425 1013.47395 83899.51 0.34223 0.00017377 0.044761 2.2727E-05 0.38699 0.00019649 507.744261206589 511.751258227992 90.01 1.8346 90.01 89.399 91.234 7.6294E-06 622 118 9 0 0 0 0.0061495 2 50023 67.032 59.802 1 1.8753 1.5389 0 37308000 13025000 24282000 5471 1624;1656;1100;2186 2049 2107 8571;8572 8572 839 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(55.68)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.7515 2 507.74425 1013.47395 85497 0.61758 0.00031357 -0.18464 -9.375E-05 0.43294 0.00021982 507.744136298332 511.751175433365 110.49 0.91272 110.49 110.12 111.03 0 194 44 7 0 0 0 0.011979 1 63808 55.676 49.637 1 2.6927 2.1237 0 10825000 2978700 7846500 5472 1624;1656;1100;2186 2049 2107 8573 8573 839 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(54.55)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.7515 2 507.74425 1013.47395 82163.05 0.23793 0.00012081 -0.037669 -1.9126E-05 0.20026 0.00010168 507.744242800644 511.751252231243 90.064 1.8 90.064 89.558 91.358 0 573 114 8 0 0 0 0.012814 3 49361 54.549 54.549 1 1.887 1.5603 0 32522000 11153000 21370000 5473 1624;1656;1100;2186 2049 2107 8574;8575;8576 8575 839 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(67.03)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.7515 2 507.74425 1013.47395 85659.84 0.5566 0.00028261 -0.41976 -0.00021313 0.13684 6.9481E-05 507.74400031251 511.751102394829 110.5 0.94252 110.5 110.13 111.07 0 177 49 6 0 0 0 0.0061495 2 62795 67.032 67.032 1 2.767 2.251 0 7066500 2082500 4983900 5474 1624;1656;1100;2186 2049 2107 8577;8578 8577 839 DLTDYLMK 8 1 0 Unmodified _DLTDYLMK_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.7542 2 499.746793 997.479033 86071.69 0.55773 0.00027872 0.14149 7.0711E-05 0.69922 0.00034943 499.746838930978 503.753854397765 98.345 1.0316 98.345 97.825 98.856 0 386 83 6 0 0 0 0.026974 2 60447 54.205 36.169 1 1.543 1.7011 0 55939000 22616000 33324000 5475 1624;1656;1100;2186 2049 2108 8579;8580 8580 DLTDYLMK 8 1 0 Unmodified _DLTDYLMK_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.7543 2 499.746793 997.479033 85750.75 0.14362 7.1774E-05 0.2519 0.00012588 0.39552 0.00019766 499.746892603271 503.753917480116 97.502 1.1218 97.502 97.16 98.282 7.6294E-06 372 91 6 0 0 0 0.022274 1 60829 57.281 30.679 1 1.4881 1.625 0 40271000 16662000 23608000 5476 1624;1656;1100;2186 2049 2108 8581 8581 DLTDYLMK 8 1 0 Unmodified _DLTDYLMK_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.7469 2 499.746793 997.479033 83470.48 0.4869 0.00024333 -0.095369 -4.766E-05 0.39153 0.00019567 499.746779852617 503.753759139999 110.47 1.1099 110.47 110.1 111.21 0 243 52 7 0 0 0 0.033206 1 63884 50.127 30.49 1 2.7408 2.225 0 27066000 7046100 20020000 5477 1624;1656;1100;2186 2049 2108 8582 8582 DLTDYLMK 8 1 0 Unmodified _DLTDYLMK_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;A0AUL6;P63261;B4E3A4;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 503.754 2 499.746793 997.479033 84795.83 0.34536 0.00017259 -0.1334 -6.6666E-05 0.21196 0.00010593 499.746755640327 503.753735065182 110.48 1.1028 110.48 110.07 111.17 7.6294E-06 242 57 6 0 0 0 0.026448 2 62764 54.549 27.025 1 2.7358 2.2266 0 25381000 6824700 18556000 5478 1624;1656;1100;2186 2049 2108 8583;8584 8583 DLTEALDEDADPTK 14 1 0 Unmodified _DLTEALDEDADPTK_ 0 0 0 D3DS96;Q9NRL2 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.8599 2 766.851758 1531.68896 NaN NaN NaN 0.064301 4.931E-05 NaN NaN NaN NaN 81.611 0.56582 81.611 81.294 81.86 0 0 0 0 7.4032E-15 1 48580 119.76 83.82 1 NaN NaN 0 8590700 0 8590700 5479 1187 2050 2109 8585 8585 DLTEALDEDADPTK 14 1 0 Unmodified _DLTEALDEDADPTK_ 0 0 0 D3DS96;Q9NRL2 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.8592 2 766.851758 1531.68896 NaN NaN NaN -0.07017 -5.381E-05 NaN NaN NaN NaN 80.963 0.50231 80.963 80.667 81.169 0 0 0 0 5.4586E-15 1 49384 122.7 94.686 1 NaN NaN 0 8738700 0 8738700 5480 1187 2050 2109 8586 8586 DLTEALDEDADPTK 14 1 0 Unmodified _DLTEALDEDADPTK_ 0 0 0 D3DS96;Q9NRL2 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.8591 2 766.851758 1531.68896 NaN NaN NaN -0.096494 -7.3997E-05 NaN NaN NaN NaN 92.795 0.64371 92.795 92.507 93.151 0 0 0 0 0.0049267 1 51643 56.951 31.293 1 NaN NaN 0 2285100 0 2285100 5481 1187 2050 2109 8587 8587 DLTGVQNLR 9 0 1 Unmodified _DLTGVQNLR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;Q14917 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.283 2 508.28018 1014.54581 NaN NaN NaN -0.14304 -7.2703E-05 NaN NaN NaN NaN 66.144 0.56143 66.144 65.827 66.389 0 0 0 0 0.04983 1 33456 47.082 14.241 1 NaN NaN 0 528500 0 528500 5482 523 2051 2110 8588 8588 DLTIPESSTVK 11 1 0 Unmodified _DLTIPESSTVK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EPU6 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.327 2 595.319168 1188.62378 NaN NaN NaN 0.020622 1.2277E-05 NaN NaN NaN NaN 68.464 0.80014 68.464 68.104 68.904 7.6294E-06 0 0 0 0.0040739 1 39636 66.621 48.586 1 NaN NaN 0 51788000 0 51788000 5483 1194;1193 2052 2111 8589 8589 DLTIPESSTVK 11 1 0 Unmodified _DLTIPESSTVK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EPU6 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.3273 2 595.319168 1188.62378 NaN NaN NaN 0.0082148 4.8904E-06 NaN NaN NaN NaN 67.459 0.4261 67.459 67.097 67.523 0 0 0 0 0.0011039 1 39822 85.731 67.695 1 NaN NaN 0 82637000 0 82637000 5484 1194;1193 2052 2111 8590 8590 DLTIPESSTVK 11 1 0 Unmodified _DLTIPESSTVK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EPU6 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.3256 2 595.319168 1188.62378 NaN NaN NaN 0.011953 7.1158E-06 NaN NaN NaN NaN 78.055 0.95621 78.055 77.691 78.647 0 0 0 0 0.046979 1 41690 45.161 27.125 1 NaN NaN 0 19914000 0 19914000 5485 1194;1193 2052 2111 8591 8591 DLTIPESSTVK 11 1 0 Unmodified _DLTIPESSTVK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EPU6 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.3257 2 595.319168 1188.62378 NaN NaN NaN -0.23032 -0.00013711 NaN NaN NaN NaN 78.438 1.3939 78.438 77.833 79.227 0 0 0 0 0.0030546 1 41166 68.657 50.621 1 NaN NaN 0 17975000 0 17975000 5486 1194;1193 2052 2111 8592 8592 DLTLDQAYSYAVENAK 16 1 0 Unmodified _DLTLDQAYSYAVENAK_ 0 0 0 G3V3H8;G3V3Y5;A0A024R6K8;P23381 G3V3H8 G3V3H8 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.9424 2 900.936156 1799.85776 NaN NaN NaN -0.74389 -0.0006702 NaN NaN NaN NaN 109.17 0.28396 109.17 108.95 109.24 -7.6294E-06 0 0 0 0.0018658 1 68235 62.088 52.766 1 NaN NaN 0 6672100 0 6672100 5487 204 2053 2112 8593 8593 DLTNSHFFLFDFQK 14 1 0 Unmodified _DLTNSHFFLFDFQK_ 0 0 0 O43159;E9PPP6 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.6262 3 586.954383 1757.84132 80110.52 0.70682 0.00041487 -0.52431 -0.00030775 0.18251 0.00010713 586.953036632584 589.960036907841 120.48 0.48912 120.48 120.24 120.73 0 110 34 5 0 0 0 0.00080654 1 77556 48.527 48.527 1 2.3957 2.3684 0 8376700 2617600 5759100 5488 1380 2054 2113 8594 8594 DLTNSHFFLFDFQK 14 1 0 Unmodified _DLTNSHFFLFDFQK_ 0 0 0 O43159;E9PPP6 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.9611 3 586.954383 1757.84132 79825.65 0.91081 0.0005346 -0.50052 -0.00029378 0.41029 0.00024082 586.953496277866 589.625781684453 119.91 0.51634 119.91 119.58 120.09 0 142 37 8 0 0 0 4.8539E-05 1 78995 75.462 75.462 1 2.1558 2.2012 0 11999000 4896200 7102900 5489 1380 2054 2113 8595 8595 DLTNSHFFLFDFQK 14 1 0 Unmodified _DLTNSHFFLFDFQK_ 0 0 0 O43159;E9PPP6 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.954 3 586.954383 1757.84132 80018.37 0.77104 0.00045257 -0.26357 -0.00015471 0.50747 0.00029786 587.288551638459 589.625739834385 131.84 0.44215 131.84 131.68 132.12 0 111 20 8 0 0 0 0.0016878 2 80098 43.69 43.69 1 0.78019 0.61593 0 5323800 3087700 2236100 5490 1380 2054 2113 8596;8597 8597 DLTNSHFFLFDFQK 14 1 0 Unmodified _DLTNSHFFLFDFQK_ 0 0 0 O43159;E9PPP6 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.6257 3 586.954383 1757.84132 79915.7 0.92275 0.00054161 0.068548 4.0234E-05 0.9913 0.00058185 587.288637741343 589.62572326777 131.62 0.44165 131.62 131.43 131.87 0 78 15 7 0 0 0 0.0042944 3 78974 35.657 35.657 1 0.86302 0.67237 0 3502900 1784800 1718000 5491 1380 2054 2113 8598;8599;8600 8599 DLTNVQNLQK 10 1 0 Unmodified _DLTNVQNLQK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8245 2 586.817127 1171.6197 NaN NaN NaN -0.4631 -0.00027176 NaN NaN NaN NaN 50.468 0.38011 50.468 50.3 50.68 0 0 0 0 1.7025E-15 1 27879 133.58 101.65 1 NaN NaN 0 16792000 0 16792000 5492 523 2055 2114 8601 8601 DLTNVQNLQK 10 1 0 Unmodified _DLTNVQNLQK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8246 2 586.817127 1171.6197 81780.13 0.48363 0.0002838 0.20873 0.00012249 0.69236 0.00040629 586.816854066806 590.8247522314 49.428 0.50943 49.428 49.145 49.655 0 92 42 4 0 0 0 1.5398E-09 1 27787 131.41 106.53 1 2.3975 2.4379 0 12580000 4252800 8326900 5493 523 2055 2114 8602 8602 DLTSVNILLK 10 1 0 Unmodified _DLTSVNILLK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;O15020 D6W5C0;O15020 D6W5C0 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.3442 2 558.337164 1114.65977 84874.05 0.89881 0.00050184 -0.14827 -8.2785E-05 0.75054 0.00041905 558.337122735484 562.344038705665 111.39 0.48832 111.39 111.09 111.58 0 74 34 4 0 0 0 0.0022766 2 70163 69.825 27.716 1 1.7584 1.7915 0 10384000 3761200 6622800 5494 415;1372 2056 2115 8603;8604 8604 DLTSVNILLK 10 1 0 Unmodified _DLTSVNILLK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;O15020 D6W5C0;O15020 D6W5C0 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.3372 2 558.337164 1114.65977 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.38 1 111.38 110.88 111.88 7.6294E-06 0 0 0 0.00017639 1 70104 79.906 36.099 1 5495 415;1372 2056 2115 8605 8605 DLTSVNILLK 10 1 0 Unmodified _DLTSVNILLK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;O15020 D6W5C0;O15020 D6W5C0 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.8454 2 558.337164 1114.65977 83337.52 0.58889 0.0003288 -0.097431 -5.44E-05 0.49146 0.0002744 558.336996083332 562.34422307501 110.75 0.42407 110.75 110.56 110.99 0 116 32 4 0 0 0 0.00076782 3 71385 81.548 39.439 1 1.6108 1.6338 0 9084900 3480500 5604400 5496 415;1372 2056 2115 8606;8607;8608 8607 DLTSVNILLK 10 1 0 Unmodified _DLTSVNILLK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;O15020 D6W5C0;O15020 D6W5C0 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.3453 2 558.337164 1114.65977 NaN NaN NaN 0.69174 0.00038622 NaN NaN NaN NaN 122.29 0.35233 122.29 122.11 122.46 7.6294E-06 0 0 0 0.052355 1 72925 46.158 24.072 1 NaN NaN 0 831640 0 831640 5497 415;1372 2056 2115 8609 8609 DLTTAGAVTQCYR 13 0 1 Unmodified _DLTTAGAVTQCYR_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B2R4C0;Q32XH3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.3535 2 728.348465 1454.68238 69449.66 0.57123 0.00041606 0.041427 3.0173E-05 0.61266 0.00044623 728.348687330708 733.352722324839 61.332 1.3034 61.332 60.731 62.035 3.8147E-06 689 99 9 0 0 0 1.9219E-23 4 35324 152.54 152.54 1 0.80651 0.95354 0 260550000 142830000 117720000 5498 1003 2057 2116 8610;8611;8612;8613 8613 DLTTAGAVTQCYR 13 0 1 Unmodified _DLTTAGAVTQCYR_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B2R4C0;Q32XH3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.3531 2 728.348465 1454.68238 68785.24 0.27342 0.00019914 0.023618 1.7202E-05 0.29703 0.00021634 728.348812622629 733.3524628583 60.296 1.0457 60.296 59.996 61.042 3.8147E-06 466 76 11 0 0 0 1.4326E-13 4 35069 131.83 126.34 1 0.79501 0.92604 0 446880000 246110000 200770000 5499 1003 2057 2116 8614;8615;8616;8617 8614 DLTTAGAVTQCYR 13 0 1 Unmodified _DLTTAGAVTQCYR_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B2R4C0;Q32XH3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.8497 2 728.348465 1454.68238 69270.96 0.35192 0.00025632 0.032769 2.3868E-05 0.38469 0.00028018 728.348739894888 733.352687824558 70.766 1.3499 70.766 70.3 71.65 0 573 90 10 0 0 0 1.1366E-06 3 37031 111.27 106.06 1 1.0714 0.92436 0 79804000 38273000 41532000 5500 1003 2057 2116 8618;8619;8620 8618 DLTTAGAVTQCYR 13 0 1 Unmodified _DLTTAGAVTQCYR_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B2R4C0;Q32XH3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 733.3528 2 728.348465 1454.68238 68562.69 0.11929 8.6884E-05 0.40878 0.00029774 0.52807 0.00038462 728.348942504034 733.352995352187 71.406 1.0415 71.406 71.001 72.043 0 489 67 10 0 0 0 0.00011749 4 36647 76.302 76.302 1 1.0221 0.89193 0 70603000 35034000 35568000 5501 1003 2057 2116 8621;8622;8623;8624 8622 DLVAIEAK 8 1 0 Unmodified _DLVAIEAK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.7572 2 429.750193 857.485833 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.294 1 60.294 59.794 60.794 0 0 0 0 0.047267 1 34414 55.531 22.173 1 5502 415 2058 2117 8625 8625 DLVAQAPLK 9 1 0 Unmodified _DLVAQAPLK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.7847 2 477.784567 953.554582 88700.76 0.15144 7.2358E-05 0.28475 0.00013605 0.43619 0.00020841 477.784572238846 481.791715708094 63.607 0.80079 63.607 63.277 64.078 0 310 78 5 0 0 0 0.004147 1 36412 69.998 51.216 1 0.7455 0.80569 0 42603000 22790000 19813000 5503 168 2059 2118 8626 8626 DLVAQAPLK 9 1 0 Unmodified _DLVAQAPLK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.7843 2 477.784567 953.554582 88855.21 0.064522 3.0828E-05 0.10533 5.0323E-05 0.16985 8.115E-05 477.78459097725 481.791697373037 62.529 0.94791 62.529 62.058 63.006 0 316 87 6 0 0 0 0.004147 2 36528 69.998 51.216 1 0.74577 0.81823 0 41240000 24519000 16721000 5504 168 2059 2118 8627;8628 8627 DLVAQAPLKPK 11 2 0 Unmodified _DLVAQAPLKPK_ 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.3733 2 590.358431 1178.70231 79391.95 0.65711 0.00038793 0.075915 4.4817E-05 0.73302 0.00043274 590.358421002726 598.372581360406 51.167 0.81377 51.167 50.771 51.585 0 307 74 6 0 0 0 0.0025176 1 28198 76.221 72.277 1 0.75477 0.891 0 60618000 31108000 29510000 5505 168 2060 2119 8629 8629 DLVAQAPLKPK 11 2 0 Unmodified _DLVAQAPLKPK_ 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.3582 2 590.358431 1178.70231 79226.28 0.95679 0.00056485 -0.051702 -3.0523E-05 0.90509 0.00053433 590.358317529004 598.372523540483 49.92 0.78162 49.92 49.526 50.308 -3.8147E-06 292 66 6 0 0 0 0.0018552 2 28073 85.862 80.955 1 0.79883 0.9256 0 60521000 36149000 24372000 5506 168 2060 2119 8630;8631 8631 DLVAQAPLKPK 11 2 0 Unmodified _DLVAQAPLKPK_ 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.3732 2 590.358431 1178.70231 78766.55 0.54566 0.00032214 0.084003 4.9592E-05 0.62967 0.00037173 590.358336147444 598.372647605764 58.268 0.78889 58.268 57.808 58.597 3.8147E-06 325 60 8 0 0 0 0.0023724 2 29442 78.334 74.926 1 1.8347 1.5651 0 18192000 7002900 11189000 5507 168 2060 2119 8632;8633 8632 DLVAQAPLKPK 11 2 0 Unmodified _DLVAQAPLKPK_ 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.3729 2 590.358431 1178.70231 78860 0.49853 0.00029431 -0.14668 -8.6591E-05 0.35185 0.00020772 590.358270984547 598.372487066213 58.649 0.81612 58.649 58.215 59.031 3.8147E-06 329 64 8 0 0 0 0.0062785 1 29036 69.598 68.338 1 1.8883 1.6004 0 18395000 6526400 11868000 5508 168 2060 2119 8634 8634 DLVEGFTDAEIR 12 0 1 Unmodified _DLVEGFTDAEIR_ 0 0 0 A0A024RC75;O14647;A0A1B0GTU9;A0A1B0GTM9 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.8413 2 682.838256 1363.66196 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.696 1 99.696 99.196 100.2 -7.6294E-06 0 0 0 0.0007062 1 62524 76.943 49.64 1 5509 354 2061 2120 8635 8635 DLVIVAANLQK 11 1 0 Unmodified _DLVIVAANLQK_ 0 0 0 A0A024R2M7;O95747 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.363 2 592.355888 1182.69722 NaN NaN NaN 0.3356 0.0001988 NaN NaN NaN NaN 94.913 0.48791 94.913 94.566 95.054 0 0 0 0 0.0022065 1 57624 76.827 55.956 1 NaN NaN 0 6284500 0 6284500 5510 117 2062 2121 8636 8636 DLVLGPSGVLQGIR 14 0 1 Unmodified _DLVLGPSGVLQGIR_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.4216 2 712.417008 1422.81946 73447.19 1.0794 0.00076898 0.30294 0.00021582 1.3823 0.0009848 712.417421992049 717.421529191367 117.03 0.42863 117.03 116.81 117.24 0 134 31 6 0 0 0 0.00014072 3 74831 78.342 56.314 1 1.276 1.3132 0 10180000 4211900 5967800 5511 1194;1193 2063 2122 8637;8638;8639 8637 DLVLGPSGVLQGIR 14 0 1 Unmodified _DLVLGPSGVLQGIR_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.9237 2 712.417008 1422.81946 74358.3 0.7291 0.00051942 0.53452 0.0003808 1.2636 0.00090022 712.417403934623 717.421615456249 116.5 0.49823 116.5 116.33 116.83 7.6294E-06 118 31 6 0 0 0 4.8873E-05 3 76307 93.258 65.911 1 1.1327 1.1118 0 14078000 5668900 8409000 5512 1194;1193 2063 2122 8640;8641;8642 8640 DLVLGPSGVLQGIR 14 0 1 Unmodified _DLVLGPSGVLQGIR_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.4178 2 712.417008 1422.81946 73508.73 1.1967 0.00085255 -0.044755 -3.1884E-05 1.1519 0.00082067 712.416809088313 717.421134287573 128.55 0.41368 128.55 128.35 128.76 0 74 17 6 0 0 0 0.0013582 2 77635 54.259 54.259 1 1.9229 1.68 0 1870500 534970 1335500 5513 1194;1193 2063 2122 8643;8644 8644 DLVLGPSGVLQGIR 14 0 1 Unmodified _DLVLGPSGVLQGIR_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.9188 2 712.417008 1422.81946 74948.95 0.88135 0.00062789 -0.13454 -9.5851E-05 0.7468 0.00053204 712.416950403617 717.421029113114 128.41 0.45546 128.41 128.11 128.57 0 74 18 6 0 0 0 0.0019148 2 76657 50.284 50.284 1 1.6096 1.3745 0 2895900 1062000 1833800 5514 1194;1193 2063 2122 8645;8646 8646 DLVLGPSGVLQGIRPGK 17 1 1 Unmodified _DLVLGPSGVLQGIRPGK_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.5017 2 853.501603 1704.98865 67718.8 0.77233 0.00065919 -0.48258 -0.00041188 0.28976 0.00024731 853.501450553029 862.512704346754 106.3 0.74944 106.3 105.96 106.71 0 322 53 9 0 0 0 3.7166E-12 2 66126 121.02 121.02 1 1.2587 1.5152 0 97971000 44069000 53902000 5515 1194;1193 2064 2123 8647;8648 8648 DLVLGPSGVLQGIRPGK 17 1 1 Unmodified _DLVLGPSGVLQGIRPGK_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.6719 3 569.336828 1704.98865 81062.73 0.65016 0.00037016 -0.13551 -7.7149E-05 0.51465 0.00029301 569.336625875584 575.344271884701 106.31 0.62349 106.31 105.99 106.62 0 170 44 6 0 0 0 5.4587E-07 1 65979 72.11 72.11 1 1.2051 1.3909 0 28192000 11104000 17088000 5516 1194;1193 2064 2123 8649 8649 DLVLGPSGVLQGIRPGK 17 1 1 Unmodified _DLVLGPSGVLQGIRPGK_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.5135 2 853.501603 1704.98865 66669.27 0.69388 0.00059223 -0.69818 -0.0005959 -0.0043007 -3.6707E-06 853.501395828753 862.512704857089 105.62 0.66905 105.62 105.26 105.93 0 313 46 9 0 0 0 4.565E-17 1 66936 125.54 125.54 1 1.2545 1.4794 0 110960000 48742000 62215000 5517 1194;1193 2064 2123 8650 8650 DLVLGPSGVLQGIRPGK 17 1 1 Unmodified _DLVLGPSGVLQGIRPGK_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.3377 3 569.336828 1704.98865 80341.47 0.65793 0.00037458 -0.19096 -0.00010872 0.46697 0.00026586 569.336622766965 575.344183119755 105.61 0.57938 105.61 105.29 105.87 0 233 39 8 0 0 0 4.9904E-05 2 67023 55.815 50.156 1 1.1415 1.3233 0 35368000 15695000 19673000 5518 1194;1193 2064 2123 8651;8652 8652 DLVLGPSGVLQGIRPGK 17 1 1 Unmodified _DLVLGPSGVLQGIRPGK_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 862.5132 2 853.501603 1704.98865 65750.27 0.42816 0.00036544 -0.068491 -5.8458E-05 0.35967 0.00030698 853.501634566326 862.512752549203 116.99 0.61745 116.99 116.77 117.39 0 177 25 10 0 0 0 1.9031E-05 2 68938 87.001 87.001 1 1.8513 1.6526 0 71542000 22196000 49347000 5519 1194;1193 2064 2123 8653;8654 8654 DLVLGPSGVLQGIRPGK 17 1 1 Unmodified _DLVLGPSGVLQGIRPGK_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.3366 3 569.336828 1704.98865 79956.91 0.34009 0.00019362 0.0050067 2.8505E-06 0.34509 0.00019647 569.671097911293 575.344387625627 116.99 0.53496 116.99 116.77 117.31 0 131 21 9 0 0 0 2.5841E-05 2 68836 58.159 57.014 1 2.2403 1.9583 0 24953000 7607200 17345000 5520 1194;1193 2064 2123 8655;8656 8656 DLVLGPSGVLQGIRPGK 17 1 1 Unmodified _DLVLGPSGVLQGIRPGK_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.0043 2 853.501603 1704.98865 65720.76 0.66807 0.0005702 -0.15051 -0.00012846 0.51756 0.00044174 853.501583950047 862.512638783741 116.8 0.73665 116.8 116.51 117.24 0 207 33 10 0 0 0 0.027154 1 67720 34.96 34.96 1 1.9678 1.6823 0 96198000 33328000 62869000 5521 1194;1193 2064 2123 8657 8657 DLVLGPSGVLQGIRPGK 17 1 1 Unmodified _DLVLGPSGVLQGIRPGK_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.3363 3 569.336828 1704.98865 79787.97 0.60759 0.00034592 -0.18238 -0.00010384 0.42521 0.00024209 569.336645271185 575.344267854731 116.8 0.53896 116.8 116.51 117.05 -7.6294E-06 136 23 9 0 0 0 5.5866E-06 2 67739 77.562 75.491 1 2.0128 1.7067 0 17689000 5907800 11782000 5522 1194;1193 2064 2123 8658;8659 8658 DLVLPTQALPASPALK 16 1 0 Unmodified _DLVLPTQALPASPALK_ 0 0 0 Q15554;H3BR06;U3KQ35;J3KSZ6 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.4866 2 817.479805 1632.94506 74005.86 0.85727 0.0007008 -0.55454 -0.00045333 0.30272 0.00024747 817.479260741846 821.486131795086 116.93 0.31382 116.93 116.75 117.07 -7.6294E-06 60 20 5 0 0 0 0.0032483 2 74767 37.426 37.426 1 1.333 1.4121 0 3749700 1555700 2194000 5523 1762 2065 2124 8660;8661 8660 DLVLPTQALPASPALK 16 1 0 Unmodified _DLVLPTQALPASPALK_ 0 0 0 Q15554;H3BR06;U3KQ35;J3KSZ6 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.488 2 817.479805 1632.94506 NaN NaN NaN -0.24007 -0.00019625 NaN NaN NaN NaN 116.45 0.23483 116.45 116.31 116.55 0 0 0 0 0.0020459 1 76173 61.435 26.548 1 NaN NaN 0 3101200 0 3101200 5524 1762 2065 2124 8662 8662 DLVLPTQALPASPALK 16 1 0 Unmodified _DLVLPTQALPASPALK_ 0 0 0 Q15554;H3BR06;U3KQ35;J3KSZ6 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 821.4876 2 817.479805 1632.94506 69633.33 1.2392 0.001013 -0.62891 -0.00051412 0.61032 0.00049893 817.479292363502 821.486130658257 128.45 0.52727 128.45 128.21 128.74 0 84 22 6 0 0 0 0.019897 1 77589 28.764 28.764 1 1.2061 0.9757 0 2758400 925350 1833000 5525 1762 2065 2124 8663 8663 DLVLPTQALPASPALK 16 1 0 Unmodified _DLVLPTQALPASPALK_ 0 0 0 Q15554;H3BR06;U3KQ35;J3KSZ6 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 821.4868 2 817.479805 1632.94506 69277.63 0.93638 0.00076548 -0.48509 -0.00039655 0.4513 0.00036893 817.479277911282 821.486300890751 128.31 0.43179 128.31 128.09 128.52 0 88 17 7 0 0 0 0.0046479 2 76519 36.284 36.284 1 1.3521 1.0736 0 3130300 1384800 1745500 5526 1762 2065 2124 8664;8665 8664 DLVWLEEIQEEAER 14 0 1 Unmodified _DLVWLEEIQEEAER_ 0 0 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.9315 2 879.930874 1757.84719 NaN NaN NaN -0.074664 -6.5699E-05 NaN NaN NaN NaN 128.7 0.40942 128.7 128.44 128.85 0 0 0 0 6.5232E-55 1 83886 174.84 160.42 1 NaN NaN 0 29111000 29111000 0 5527 2059 2066 2125 8666 8666 DLVWLEEIQEEAER 14 0 1 Unmodified _DLVWLEEIQEEAER_ 0 0 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 884.9365 2 879.930874 1757.84719 65907.88 0.55269 0.00048633 0.48549 0.0004272 1.0382 0.00091352 879.930955895822 884.935426392102 128.4 0.52225 128.4 128.07 128.59 -1.5259E-05 199 36 10 0 0 0 7.4403E-48 2 85745 188.06 182.35 1 0.79248 0.90374 0 97315000 57810000 39506000 5528 2059 2066 2125 8667;8668 8667 DLWYLETEKPPPPAR 15 1 1 Unmodified _DLWYLETEKPPPPAR_ 0 0 1 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 915.4837 2 906.469969 1810.92539 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.895 1 87.895 87.395 88.395 0 0 0 0 0.0052209 1 54213 64.55 53.94 1 5529 680 2067 2126 8669 8669 DLYANTVLSGGTTMYPGIADR 21 0 1 Oxidation (M) _DLYANTVLSGGTTM(ox)YPGIADR_ DLYANTVLSGGTTM(1)YPGIADR DLYANTVLSGGTTM(133.66)YPGIADR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1121.542 2 1116.03608 2230.0576 56585.89 0.11926 0.0001331 -0.18369 -0.00020501 -0.064434 -7.1911E-05 1116.53775543744 1121.5414602278 106.31 1.8242 106.31 105.93 107.75 -7.6294E-06 914 135 16 0 0 0 2.5559E-29 4 66289 133.66 133.66 1 2.3484 2.7942 0 1503300000 446150000 1057100000 5530 1624;1656;2186 2068 2127 8670;8671;8672;8673 8671 1410 DLYANTVLSGGTTMYPGIADR 21 0 1 Oxidation (M) _DLYANTVLSGGTTM(ox)YPGIADR_ DLYANTVLSGGTTM(1)YPGIADR DLYANTVLSGGTTM(145.69)YPGIADR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1116.0367 2 1116.03608 2230.0576 56556.51 0.33489 0.00037375 -0.32327 -0.00036078 0.011622 1.2971E-05 1116.53764530525 1121.54129420667 105.88 1.7205 105.88 105.44 107.16 0 930 127 16 0 0 0 2.3581E-37 4 67103 145.69 145.69 1 2.3054 2.7289 0 1634200000 505370000 1128800000 5531 1624;1656;2186 2068 2127 8674;8675;8676;8677 8675 1410 DLYANTVLSGGTTMYPGIADR 21 0 1 Oxidation (M) _DLYANTVLSGGTTM(ox)YPGIADR_ DLYANTVLSGGTTM(1)YPGIADR DLYANTVLSGGTTM(102.39)YPGIADR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1121.5432 2 1116.03608 2230.0576 56695.19 -0.053453 -5.9656E-05 -0.12554 -0.00014011 -0.179 -0.00019977 1116.53775975358 1121.54147103703 117.22 1.6167 117.22 116.9 118.51 0 495 70 16 0 0 0 1.2658E-15 3 68864 102.39 102.39 1 1.8585 1.6205 0 439000000 151280000 287720000 5532 1624;1656;2186 2068 2127 8678;8679;8680 8679 1410 DLYANTVLSGGTTMYPGIADR 21 0 1 Oxidation (M) _DLYANTVLSGGTTM(ox)YPGIADR_ DLYANTVLSGGTTM(1)YPGIADR DLYANTVLSGGTTM(43.86)YPGIADR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1116.0353 2 1116.03608 2230.0576 56249.59 0.1834 0.00020469 0.16423 0.00018329 0.34764 0.00038798 1116.03710041338 1121.54170051845 124.98 0.58867 124.98 124.66 125.25 0 155 26 8 0 0 0 2.4236E-05 2 74938 43.861 43.861 1 2.408 1.9728 0 16610000 4980600 11629000 5533 1624;1656;2186 2068 2127 8681;8682 8682 1410 DLYANTVLSGGTTMYPGIADR 21 0 1 Oxidation (M) _DLYANTVLSGGTTM(ox)YPGIADR_ DLYANTVLSGGTTM(1)YPGIADR DLYANTVLSGGTTM(144.18)YPGIADR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1121.0403 2 1116.03608 2230.0576 56536.39 0.11711 0.00013069 -0.071776 -8.0104E-05 0.04533 5.059E-05 1116.53786036205 1121.54150187684 117.14 1.4356 117.14 116.84 118.27 0 519 66 15 0 0 0 3.0876E-37 2 67893 144.18 144.18 1 1.8287 1.5977 0 282580000 103760000 178830000 5534 1624;1656;2186 2068 2127 8683;8684 8683 1410 DLYANTVLSGGTTMYPGIADR 21 0 1 Oxidation (M) _DLYANTVLSGGTTM(ox)YPGIADR_ DLYANTVLSGGTTM(1)YPGIADR DLYANTVLSGGTTM(103.79)YPGIADR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1121.0397 2 1116.03608 2230.0576 56462.48 0.27241 0.00030402 -0.16731 -0.00018673 0.1051 0.00011729 1116.53796539669 1121.54179938745 124.96 0.57423 124.96 124.63 125.2 7.6294E-06 157 26 9 0 0 0 1.0935E-15 1 74043 103.79 103.79 1 2.6158 2.1811 0 15915000 4532600 11382000 5535 1624;1656;2186 2068 2127 8685 8685 1410 DLYANTVLSGGTTMYPGIADR 21 0 1 Unmodified _DLYANTVLSGGTTMYPGIADR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1108.5408 2 1108.03862 2214.06268 56554.27 0.054568 6.0463E-05 0.019214 2.129E-05 0.073781 8.1752E-05 1108.54036189652 1113.54478406494 114.21 0.53134 114.21 113.93 114.46 0 230 38 9 0 0 0 1.6026E-08 3 72369 80.632 80.632 1 1.5492 1.5848 0 34232000 13513000 20719000 5536 1624;1656;2186 2068 2128 8686;8687;8688 8687 DLYANTVLSGGTTMYPGIADR 21 0 1 Unmodified _DLYANTVLSGGTTMYPGIADR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1108.5425 2 1108.03862 2214.06268 56058.95 -0.035921 -3.9801E-05 0.22456 0.00024883 0.18864 0.00020902 1108.54098343777 1113.54537420925 113.76 0.60043 113.76 113.53 114.13 0 222 43 8 0 0 0 1.0283E-21 5 73827 119.62 119.62 1 1.487 1.6287 0 31946000 14832000 17114000 5537 1624;1656;2186 2068 2128 8689;8690;8691;8692;8693 8692 DLYANTVLSGGTTMYPGIADR 21 0 1 Unmodified _DLYANTVLSGGTTMYPGIADR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1108.5415 2 1108.03862 2214.06268 56582.29 0.19215 0.00021291 -0.22974 -0.00025456 -0.037593 -4.1655E-05 1108.53955860125 1113.54413024494 124.94 0.9747 124.94 124.64 125.61 0 288 40 12 0 0 0 9.2461E-59 2 74874 171.46 171.46 1 2.8612 2.473 0 106680000 26825000 79857000 5538 1624;1656;2186 2068 2128 8694;8695 8695 DLYANTVLSGGTTMYPGIADR 21 0 1 Unmodified _DLYANTVLSGGTTMYPGIADR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1108.5406 2 1108.03862 2214.06268 57104.29 0.26594 0.00029467 -0.055345 -6.1324E-05 0.21059 0.00023335 1108.5396954819 1113.54445255983 124.96 0.7682 124.96 124.61 125.38 7.6294E-06 307 34 12 0 0 0 4.624E-09 3 73904 85.493 79.598 1 2.7731 2.4208 0 103840000 27538000 76306000 5539 1624;1656;2186 2068 2128 8696;8697;8698 8698 DLYEDELVPLFEK 13 1 0 Unmodified _DLYEDELVPLFEK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.4117 2 805.403429 1608.79231 68111.9 1.1117 0.00089539 0.15381 0.00012388 1.2655 0.0010193 805.402983066345 809.410905290416 125.63 0.68135 125.63 125.31 125.99 -7.6294E-06 260 46 9 0 0 0 1.6175E-30 2 81648 171.92 171.92 1 1.3225 1.3225 0 26595000 11734000 14861000 5540 855 2069 2129 8699;8700 8700 DLYEDELVPLFEK 13 1 0 Unmodified _DLYEDELVPLFEK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.4122 2 805.403429 1608.79231 68306.32 0.76076 0.00061272 0.32196 0.00025931 1.0827 0.00087203 805.403206603586 809.411043017792 125.31 0.66612 125.31 124.96 125.62 -7.6294E-06 272 47 8 0 0 0 0.0001555 2 83519 85.813 85.813 1 1.3392 1.3544 0 28858000 13096000 15762000 5541 855 2069 2129 8701;8702 8702 DLYEPTHGGK 10 1 0 Unmodified _DLYEPTHGGK_ 0 0 0 Q5TB52;B4DWB5;O95340;Q9UIR2 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.7782 2 558.769645 1115.52474 NaN NaN NaN 0.71649 0.00040035 NaN NaN NaN NaN 22.941 0.42737 22.941 22.718 23.145 1.9073E-06 0 0 0 0.0086658 1 8825 64.711 8.4534 1 NaN NaN 0 23919000 0 23919000 5542 1044 2070 2130 8703 8703 DLYIRPNIAQK 11 1 1 Unmodified _DLYIRPNIAQK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.8783 2 665.877519 1329.74048 75041.98 0.51081 0.00034013 0.61439 0.00040911 1.1252 0.00074925 665.877654200914 674.889365691153 62.485 0.58101 62.485 62.244 62.825 0 273 54 7 0 0 0 2.5922E-09 2 35789 130.41 130.41 1 0.6348 0.76332 0 82312000 47865000 34447000 5543 2148 2071 2131 8704;8705 8705 DLYIRPNIAQK 11 1 1 Unmodified _DLYIRPNIAQK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.89 2 665.877519 1329.74048 75203.84 0.54429 0.00036243 0.60017 0.00039964 1.1445 0.00076207 665.877490253853 674.889465739715 60.948 0.90852 60.948 60.676 61.584 0 375 85 6 0 0 0 1.4633E-11 2 35634 138.66 123.72 1 0.65807 0.77432 0 78047000 40100000 37946000 5544 2148 2071 2131 8706;8707 8707 DLYIRPNIAQK 11 1 1 Unmodified _DLYIRPNIAQK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.878 2 665.877519 1329.74048 73695.18 0.35426 0.00023589 0.34041 0.00022667 0.69467 0.00046257 665.877743224429 674.88897766189 71.453 0.90385 71.453 71.103 72.007 0 350 66 8 0 0 0 0.0097064 1 37534 64.73 64.73 1 0.86431 0.75676 0 27057000 13676000 13381000 5545 2148 2071 2131 8708 8708 DLYIRPNIAQK 11 1 1 Unmodified _DLYIRPNIAQK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.8893 2 665.877519 1329.74048 73880.54 0.15426 0.00010272 0.62839 0.00041843 0.78265 0.00052115 665.877890034025 674.889139057556 71.833 0.80508 71.833 71.453 72.258 0 338 56 8 0 0 0 0.0090096 2 36938 65.719 65.719 1 0.91631 0.77815 0 24306000 12621000 11685000 5546 2148 2071 2131 8709;8710 8709 DLYLIPLSAQDPVPSK 16 1 0 Unmodified _DLYLIPLSAQDPVPSK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 878.4809 2 878.480002 1754.94545 65210.76 0.77726 0.0006828 0.058415 5.1317E-05 0.83567 0.00073412 878.981608717065 882.48692984728 120.53 0.46168 120.53 120.37 120.83 0 148 33 6 0 0 0 0.00020674 2 77685 59.57 59.57 1 0.73365 0.76061 0 14783000 8107600 6675700 5547 2002 2072 2132 8711;8712 8711 DLYLIPLSAQDPVPSK 16 1 0 Unmodified _DLYLIPLSAQDPVPSK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.9825 2 878.480002 1754.94545 65194.76 0.99169 0.00087118 -0.45492 -0.00039964 0.53676 0.00047154 878.981098906705 882.486846270294 120.11 0.38079 120.11 119.94 120.32 -7.6294E-06 120 27 6 0 0 0 0.00015117 2 79311 62.924 62.924 1 0.89341 0.89179 0 14791000 7513200 7277900 5548 2002 2072 2132 8713;8714 8713 DLYLIPLSAQDPVPSK 16 1 0 Unmodified _DLYLIPLSAQDPVPSK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 878.481 2 878.480002 1754.94545 64788.62 1.0065 0.00088416 0.176 0.00015461 1.1825 0.0010388 878.981783685529 882.487023953724 132.44 0.52737 132.44 132.18 132.71 -1.5259E-05 141 23 8 0 0 0 0.017787 1 80601 29.805 29.805 1 1.9802 1.5359 0 14035000 4881300 9153400 5549 2002 2072 2132 8715 8715 DLYLIPLSAQDPVPSK 16 1 0 Unmodified _DLYLIPLSAQDPVPSK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 878.4808 2 878.480002 1754.94545 64840.93 0.8308 0.00072984 0.41255 0.00036242 1.2434 0.0010923 878.480501674017 882.487285868404 132.24 0.55222 132.24 131.99 132.54 0 129 24 8 0 0 0 0.011445 1 79502 32.933 32.933 1 1.7942 1.4619 0 12889000 4257100 8631800 5550 2002 2072 2132 8716 8716 DMAAPGTSSVPAPTAGNAEK 20 1 0 Oxidation (M) _DM(ox)AAPGTSSVPAPTAGNAEK_ DM(1)AAPGTSSVPAPTAGNAEK DM(45.79)AAPGTSSVPAPTAGNAEK 0 1 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 948.4476 2 944.44128 1886.86801 NaN NaN NaN -0.36976 -0.00034921 NaN NaN NaN NaN 45.367 0.41723 45.367 45.218 45.635 0 0 0 0 0.00036731 1 24402 45.79 37.061 1 NaN NaN 0 7587400 0 7587400 5551 511 2073 2133 8717 8717 356 DMAAPGTSSVPAPTAGNAEK 20 1 0 Oxidation (M) _DM(ox)AAPGTSSVPAPTAGNAEK_ DM(1)AAPGTSSVPAPTAGNAEK DM(40.94)AAPGTSSVPAPTAGNAEK 0 1 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 944.9435 2 944.44128 1886.86801 63471.67 0.90638 0.00085602 -0.26797 -0.00025308 0.63841 0.00060294 944.942575439362 948.44801896981 44.554 0.4357 44.554 44.367 44.803 -3.8147E-06 109 34 5 0 0 0 7.182E-05 1 24400 40.941 40.941 1 1.7581 1.755 0 14363000 4245900 10118000 5552 511 2073 2133 8718 8718 356 DMAAPGTSSVPAPTAGNAEK 20 1 0 Oxidation (M) _DM(ox)AAPGTSSVPAPTAGNAEK_ DM(1)AAPGTSSVPAPTAGNAEK DM(51.21)AAPGTSSVPAPTAGNAEK 0 1 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 944.4437 2 944.44128 1886.86801 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.5 1 44.5 44 45 -3.8147E-06 0 0 0 0.0014436 1 24314 51.211 37.305 1 5553 511 2073 2133 8719 8719 356 DMEANLLPGFLR 12 0 1 Oxidation (M) _DM(ox)EANLLPGFLR_ DM(1)EANLLPGFLR DM(53.76)EANLLPGFLR 0 1 0 Q9UDM8;A4D0P7;O43913;Q53FC8 Q9UDM8 Q9UDM8 ORC5L;ORC5 Origin recognition complex subunit 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.3575 2 696.353019 1390.69149 NaN NaN NaN -0.040953 -2.8518E-05 NaN NaN NaN NaN 117.45 0.48666 117.45 117.29 117.78 0 0 0 0 0.0040869 1 75132 53.756 33.995 1 NaN NaN 0 3859400 0 3859400 5554 657 2074 2134 8720 8720 514 DMEANLLPGFLR 12 0 1 Oxidation (M) _DM(ox)EANLLPGFLR_ DM(1)EANLLPGFLR DM(61.65)EANLLPGFLR 0 1 0 Q9UDM8;A4D0P7;O43913;Q53FC8 Q9UDM8 Q9UDM8 ORC5L;ORC5 Origin recognition complex subunit 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3572 2 696.353019 1390.69149 NaN NaN NaN -0.21629 -0.00015062 NaN NaN NaN NaN 117.13 0.44403 117.13 116.87 117.31 0 0 0 0 0.0017799 1 76638 61.65 35.711 1 NaN NaN 0 4952700 0 4952700 5555 657 2074 2134 8721 8721 514 DMEDPTPVPNIEEVVLPK 18 1 0 Oxidation (M) _DM(ox)EDPTPVPNIEEVVLPK_ DM(1)EDPTPVPNIEEVVLPK DM(80.69)EDPTPVPNIEEVVLPK 0 1 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1020.0068 2 1019.50609 2036.99762 60418.29 0.38622 0.00039375 -0.14024 -0.00014298 0.24597 0.00025077 1019.50619982133 1024.0149161728 120.35 0.43295 120.35 120.14 120.57 0 199 29 8 0 0 0 4.3904E-06 2 77537 80.69 73.488 1 0.97905 0.96689 0 25390000 12437000 12952000 5556 1798 2075 2135 8722;8723 8723 1661 DMEDPTPVPNIEEVVLPK 18 1 0 Oxidation (M) _DM(ox)EDPTPVPNIEEVVLPK_ DM(1)EDPTPVPNIEEVVLPK DM(72.96)EDPTPVPNIEEVVLPK 0 1 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1023.5146 2 1019.50609 2036.99762 61821.6 0.60862 0.00062049 -0.33442 -0.00034095 0.27419 0.00027954 1020.00730358867 1024.01447515727 119.95 0.45196 119.95 119.7 120.15 -7.6294E-06 208 33 8 0 0 0 9.5601E-06 3 79085 72.958 65.05 1 1.0344 1.0511 0 30071000 16091000 13981000 5557 1798 2075 2135 8724;8725;8726 8724 1661 DMESDYSGQGVDQLQR 16 0 1 Oxidation (M) _DM(ox)ESDYSGQGVDQLQR_ DM(1)ESDYSGQGVDQLQR DM(101.39)ESDYSGQGVDQLQR 0 1 0 Q53Y97;Q53FB7;A8K9A5;P04818 Q53Y97 Q53Y97 TYMS Thymidylate synthase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 927.3996 2 922.391787 1842.76902 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.209 1 49.209 48.709 49.709 -3.8147E-06 0 0 0 8.2145E-08 1 26974 101.39 87.232 1 5558 782 2076 2136 8727 8727 616 DMFQETMEAMR 11 0 1 3 Oxidation (M) _DM(ox)FQETM(ox)EAM(ox)R_ DM(1)FQETM(1)EAM(1)R DM(105.98)FQETM(105.98)EAM(105.98)R 0 3 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.7826 2 718.77817 1435.54179 71560.05 0.66588 0.00047862 -0.412 -0.00029613 0.25388 0.00018249 718.777696199725 723.782313975118 27.21 0.43101 27.21 26.926 27.357 0 90 21 6 0 0 0 3.3555E-06 1 12402 105.98 101.68 1 5.4833 5.5313 0 15581000 2563300 13018000 5559 81 2077 2137 8728 8728 52;53;54 DMFQETMEAMR 11 0 1 3 Oxidation (M) _DM(ox)FQETM(ox)EAM(ox)R_ DM(1)FQETM(1)EAM(1)R DM(82.83)FQETM(82.83)EAM(82.83)R 0 3 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.7825 2 718.77817 1435.54179 71118.8 0.97009 0.00069728 -0.47976 -0.00034484 0.49033 0.00035244 718.777995383663 723.782306617651 26.77 0.42821 26.77 26.54 26.968 0 87 20 7 0 0 0 7.4264E-05 2 12109 82.831 81.924 1 4.6527 4.8507 0 22346000 3467500 18879000 5560 81 2077 2137 8729;8730 8729 52;53;54 DMFSFEIPEHHVIVSASSDGFIK 23 1 0 Oxidation (M) _DM(ox)FSFEIPEHHVIVSASSDGFIK_ DM(1)FSFEIPEHHVIVSASSDGFIK DM(49.11)FSFEIPEHHVIVSASSDGFIK 0 1 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.0908 3 870.084456 2607.23154 NaN NaN NaN 0.25629 0.000223 NaN NaN NaN NaN 109.65 0.39398 109.65 109.36 109.76 -7.6294E-06 0 0 0 8.2948E-05 1 68773 49.106 45.211 1 NaN NaN 0 6630000 0 6630000 5561 580 2078 2138 8731 8731 434 DMFSFEIPEHHVIVSASSDGFIK 23 1 0 Oxidation (M) _DM(ox)FSFEIPEHHVIVSASSDGFIK_ DM(1)FSFEIPEHHVIVSASSDGFIK DM(60.28)FSFEIPEHHVIVSASSDGFIK 0 1 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 870.7549 3 870.084456 2607.23154 64980.04 0.45275 0.00039393 0.2732 0.00023771 0.72595 0.00063164 870.418816271318 873.090801933088 118.36 0.52028 118.36 118.18 118.7 0 144 25 9 0 0 0 1.1134E-08 2 68957 60.278 60.278 1 0.87936 0.7102 0 13539000 7272500 6266900 5562 580 2078 2138 8732;8733 8732 434 DMFSFEIPEHHVIVSASSDGFIK 23 1 0 Unmodified _DMFSFEIPEHHVIVSASSDGFIK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 867.7587 3 864.752818 2591.23662 NaN NaN NaN 0.21975 0.00019003 NaN NaN NaN NaN 124.65 0.39678 124.65 124.48 124.88 0 0 0 0 0.00045219 1 74744 40.937 37.204 1 NaN NaN 0 3496700 0 3496700 5563 580 2078 2139 8734 8734 DMGGYSTTTDFIK 13 1 0 Oxidation (M) _DM(ox)GGYSTTTDFIK_ DM(1)GGYSTTTDFIK DM(46.59)GGYSTTTDFIK 0 1 0 A0A087WZN1;O43837;A0A0D9SG66;Q9UIC5 A0A087WZN1 A0A087WZN1 IDH3B Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3264 2 726.321582 1450.62861 NaN NaN NaN 0.062587 4.5458E-05 NaN NaN NaN NaN 71.356 0.36607 71.356 71.084 71.451 7.6294E-06 0 0 0 0.0070357 1 42686 46.592 40.557 1 NaN NaN 0 5795300 0 5795300 5564 439 2079 2140 8735 8735 313 DMLEAGILDTYLGK 14 1 0 Oxidation (M) _DM(ox)LEAGILDTYLGK_ DM(1)LEAGILDTYLGK DM(107.85)LEAGILDTYLGK 0 1 0 Q7Z759;Q53HU0;P50990;H7C2U0 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.8959 2 777.889632 1553.76471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.29 1 116.29 115.79 116.79 0 0 0 0 2.9459E-09 1 76058 107.85 90.411 1 5565 1592 2080 2141 8736 8736 1372 DMLTQTYDLIER 12 0 1 Oxidation (M) _DM(ox)LTQTYDLIER_ DM(1)LTQTYDLIER DM(44.86)LTQTYDLIER 0 1 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.3659 2 757.363781 1512.71301 NaN NaN NaN -1.1321 -0.0008574 NaN NaN NaN NaN 95.472 0.22246 95.472 95.386 95.609 0 0 0 0 0.011627 1 59390 44.863 28.974 1 NaN NaN 0 3629000 3629000 0 5566 1699 2081 2142 8737 8737 1532 DMNQFGEGEQAK 12 1 0 Oxidation (M) _DM(ox)NQFGEGEQAK_ DM(1)NQFGEGEQAK DM(81.77)NQFGEGEQAK 0 1 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;C9J5E5;C9JIZ1;C9JZI8;C9JHS7;C9JHZ8;C9JES8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.2956 2 685.288073 1368.56159 77441.71 0.64487 0.00044192 -0.15074 -0.0001033 0.49412 0.00033862 685.287960147551 689.29490357318 22.257 0.2707 22.257 22.141 22.412 0 39 16 4 0 0 0 0.00010409 1 8390 81.771 77.611 1 1.7426 1.8154 0 4017800 2165500 1852300 5567 154 2082 2143 8738 8738 129 DMPIQAFLLYQEPVLGPVR 19 0 1 Oxidation (M) _DM(ox)PIQAFLLYQEPVLGPVR_ DM(1)PIQAFLLYQEPVLGPVR DM(73.89)PIQAFLLYQEPVLGPVR 0 1 0 CON__P02666 CON__P02666 CON__P02666 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1102.0872 2 1101.58501 2201.15546 NaN NaN NaN 0.2113 0.00023276 NaN NaN NaN NaN 132.87 0.54327 132.87 132.58 133.13 0 0 0 0 8.3053E-07 1 86733 73.887 60.906 1 NaN NaN 0 17169000 17169000 0 + 5568 1152 2083 2144 8739 8739 860 DMPIQAFLLYQEPVLGPVR 19 0 1 Oxidation (M) _DM(ox)PIQAFLLYQEPVLGPVR_ DM(1)PIQAFLLYQEPVLGPVR DM(82.55)PIQAFLLYQEPVLGPVR 0 1 0 CON__P02666 CON__P02666 CON__P02666 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1102.0853 2 1101.58501 2201.15546 NaN NaN NaN 0.09292 0.00010236 NaN NaN NaN NaN 132.49 0.56575 132.49 132.24 132.81 0 0 0 0 7.3895E-10 1 88658 82.55 69.349 1 NaN NaN 0 27416000 27416000 0 + 5569 1152 2083 2144 8740 8740 860 DMSTWVFGAER 11 0 1 Oxidation (M) _DM(ox)STWVFGAER_ DM(1)STWVFGAER DM(68.89)STWVFGAER 0 1 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.7981 2 657.792795 1313.57104 74531.38 0.79414 0.00052238 -0.41948 -0.00027593 0.37466 0.00024645 657.792450281088 662.797208750844 85.648 0.7276 85.648 85.296 86.023 0 247 59 6 0 0 0 0.0006088 2 51427 68.893 59.305 1 1.0081 1.0361 0 25367000 12214000 13152000 5570 1756 2084 2145 8741;8742 8742 1623 DMSTWVFGAER 11 0 1 Oxidation (M) _DM(ox)STWVFGAER_ DM(1)STWVFGAER DM(85.38)STWVFGAER 0 1 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.7973 2 657.792795 1313.57104 75210.93 0.64724 0.00042575 -0.42041 -0.00027654 0.22683 0.00014921 657.792435234927 662.797149193951 84.761 0.66522 84.761 84.362 85.027 0 234 55 6 0 0 0 0.0001697 2 52015 85.377 75.789 1 1.0506 1.1602 0 41700000 21681000 20020000 5571 1756 2084 2145 8743;8744 8743 1623 DMSTWVFGAER 11 0 1 Oxidation (M) _DM(ox)STWVFGAER_ DM(1)STWVFGAER DM(42)STWVFGAER 0 1 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.7973 2 657.792795 1313.57104 74415.28 0.43223 0.00028432 0.081653 5.3711E-05 0.51388 0.00033803 657.792592128582 662.79710104226 97.088 0.64799 97.088 96.773 97.421 -7.6294E-06 134 30 6 0 0 0 0.011589 2 53722 42.001 41.356 1 0.92091 0.78956 0 3333500 1612800 1720700 5572 1756 2084 2145 8745;8746 8745 1623 DMVQDLLDFK 10 1 0 Oxidation (M) _DM(ox)VQDLLDFK_ DM(1)VQDLLDFK DM(73.98)VQDLLDFK 0 1 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.3068 2 620.299921 1238.58529 79930.7 0.63271 0.00039247 -0.28975 -0.00017973 0.34296 0.00021274 620.3000098652 624.30644846256 107.94 0.55737 107.94 107.72 108.28 0 128 41 4 0 0 0 0.00066136 1 67318 73.985 66.505 1 0.89938 0.8919 0 9511900 3878200 5633700 5573 1718 2085 2146 8747 8747 1552 DMVQDLLDFK 10 1 0 Oxidation (M) _DM(ox)VQDLLDFK_ DM(1)VQDLLDFK DM(72.93)VQDLLDFK 0 1 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.6794 2 620.299921 1238.58529 79655.8 1.0574 0.00065593 0.14039 8.7086E-05 1.1978 0.00074302 620.299998177529 624.306920160536 108.56 0.54818 108.56 108.23 108.78 0 140 39 4 0 0 0 0.051702 1 67807 72.928 64.015 1 0.85072 0.88263 0 11328000 6843200 4484900 5574 1718 2085 2146 8748 8748 1552 DMVQDLLDFK 10 1 0 Oxidation (M) _DM(ox)VQDLLDFK_ DM(1)VQDLLDFK DM(67.56)VQDLLDFK 0 1 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.3071 2 620.299921 1238.58529 79652.96 0.60859 0.00037751 -0.22808 -0.00014148 0.38051 0.00023603 620.299760803294 624.306692654355 107.46 0.58565 107.46 107.16 107.75 0 129 40 5 0 0 0 0.001343 1 68735 67.563 62.216 1 0.88619 0.89328 0 7532600 3980300 3552300 5575 1718 2085 2146 8749 8749 1552 DMYNIIR 7 0 1 Oxidation (M) _DM(ox)YNIIR_ DM(1)YNIIR DM(50.04)YNIIR 0 1 0 A0A024RBY9;P53701;Q68D50 A0A024RBY9 A0A024RBY9 HCCS;DKFZp779I1858 Cytochrome c-type heme lyase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.7355 2 470.731477 939.448402 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.18 1 52.18 51.68 52.68 0 0 0 0 0.046161 1 29704 50.039 10.497 1 5576 350 2086 2147 8750 8750 258 DNAAVDGISLHLQDICPLLYSTDDAICSK 29 1 0 Unmodified _DNAAVDGISLHLQDICPLLYSTDDAICSK_ 0 0 0 B4DLT2;A0A024R071;O75694 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1072.189 3 1068.84444 3203.51148 60371.07 0.89188 0.00095328 -0.024279 -2.595E-05 0.8676 0.00092733 1069.1781358021 1071.85028349712 129.91 0.2182 129.91 129.81 130.03 0 31 10 5 0 0 0 0.026892 1 84652 14.977 14.977 1 1.1863 1.2302 0 4096000 1273800 2822100 5577 39 2087 2148 8751 8751 DNAAVDGISLHLQDICPLLYSTDDAICSK 29 1 0 Unmodified _DNAAVDGISLHLQDICPLLYSTDDAICSK_ 0 0 0 B4DLT2;A0A024R071;O75694 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1072.5168 3 1068.84444 3203.51148 61973.56 0.47401 0.00050665 0.034942 3.7348E-05 0.50896 0.00054399 1069.17858286999 1071.8501628675 129.6 0.41188 129.6 129.32 129.73 0 64 23 6 0 0 0 0.040397 1 86563 11.001 11.001 1 1.0769 1.0802 0 6882800 2331400 4551400 5578 39 2087 2148 8752 8752 DNALLSAIEESRK 13 1 1 Unmodified _DNALLSAIEESRK_ 0 0 1 Q8N1F7;A8K897;H3BVG0;H3BV11;H3BRI8;H3BM93;H3BNN5 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.3955 2 723.383362 1444.75217 73971.94 0.74077 0.00053586 -0.25868 -0.00018713 0.48208 0.00034873 723.383101459004 732.39478902343 85.643 0.54196 85.643 85.413 85.955 0 106 44 4 0 0 0 0.00094996 1 51473 61.375 52.417 1 1.3563 1.4765 0 9677700 4289400 5388300 5579 1904 2088 2149 8753 8753 DNALLSAIEESRK 13 1 1 Unmodified _DNALLSAIEESRK_ 0 0 1 Q8N1F7;A8K897;H3BVG0;H3BV11;H3BRI8;H3BM93;H3BNN5 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.3968 2 723.383362 1444.75217 71354.28 0.60339 0.00043648 -0.1147 -8.2974E-05 0.48869 0.00035351 723.382445255611 732.394804411879 84.7 0.55563 84.7 84.294 84.85 0 162 46 5 0 0 0 0.00059616 1 51894 62.924 55.094 1 1.7891 2.0081 0 12814000 4878300 7936000 5580 1904 2088 2149 8754 8754 DNEEVVLSENK 11 1 0 Unmodified _DNEEVVLSENK_ 0 0 0 A0A024RD28;Q7L2Z9 A0A024RD28 A0A024RD28 C6orf139;CENPQ Centromere protein Q MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8675 2 638.306789 1274.59903 76490.2 0.86197 0.0005502 0.77808 0.00049665 1.6401 0.0010469 638.306892699991 642.816870343017 42.073 0.31647 42.073 41.906 42.223 0 51 23 5 0 0 0 0.0346 1 22322 58.63 58.63 1 0.8376 0.83062 0 8204400 4795700 3408700 5581 376 2089 2150 8755 8755 DNEQALYELVK 11 1 0 Unmodified _DNEQALYELVK_ 0 0 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.3362 2 661.33535 1320.65615 NaN NaN NaN 0.24174 0.00015987 NaN NaN NaN NaN 96.076 0.57683 96.076 95.721 96.298 7.6294E-06 0 0 0 0.0011188 1 58458 85.622 75.735 1 NaN NaN 0 7714200 7714200 0 5582 1903 2090 2151 8756 8756 DNEQALYELVK 11 1 0 Unmodified _DNEQALYELVK_ 0 0 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.3363 2 661.33535 1320.65615 NaN NaN NaN 0.38488 0.00025454 NaN NaN NaN NaN 95.323 0.51469 95.323 95.108 95.623 0 0 0 0 0.0013343 1 59261 84.054 74.732 1 NaN NaN 0 6329300 6329300 0 5583 1903 2090 2151 8757 8757 DNFGFIETANHDK 13 1 0 Unmodified _DNFGFIETANHDK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.3522 2 754.344237 1506.67392 69537.27 0.50156 0.00037835 0.11576 8.7326E-05 0.61732 0.00046567 754.343958948096 758.351425865569 67.42 0.82242 67.42 67.009 67.831 0 300 67 7 0 0 0 9.859E-19 5 39109 142.08 142.08 1 2.3524 2.5388 0 34620000 10156000 24464000 5584 42 2091 2152 8758;8759;8760;8761;8762 8761 DNFGFIETANHDK 13 1 0 Unmodified _DNFGFIETANHDK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.3508 2 754.344237 1506.67392 69927.37 0.46142 0.00034807 -0.27463 -0.00020716 0.1868 0.00014091 754.343680866753 758.351062889884 66.157 0.7394 66.157 65.821 66.56 0 248 61 7 0 0 0 1.7422E-23 2 38997 153.54 153.54 1 2.2769 2.5274 0 48952000 15557000 33395000 5585 42 2091 2152 8763;8764 8763 DNFGFIETANHDK 13 1 0 Unmodified _DNFGFIETANHDK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 758.3506 2 754.344237 1506.67392 69572.62 0.54847 0.00041373 0.027647 2.0856E-05 0.57611 0.00043459 754.344113987085 758.351133682649 76.701 0.97163 76.701 76.345 77.316 0 220 67 6 0 0 0 0.00011751 1 40798 91.123 91.123 1 2.1516 1.6952 0 5828800 1780100 4048700 5586 42 2091 2152 8765 8765 DNFGFIETANHDK 13 1 0 Unmodified _DNFGFIETANHDK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 758.3504 2 754.344237 1506.67392 NaN NaN NaN -0.13815 -0.00010422 NaN NaN NaN NaN 76.97 0.58923 76.97 76.636 77.226 7.6294E-06 0 0 0 0.000394 1 40253 85.522 77.301 1 NaN NaN 0 3839300 0 3839300 5587 42 2091 2152 8766 8766 DNFNVDEIFLK 11 1 0 Unmodified _DNFNVDEIFLK_ 0 0 0 Q6IQ22 Q6IQ22 Q6IQ22 RAB12 Ras-related protein Rab-12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3459 2 677.337892 1352.66123 84049.86 0.76426 0.00051767 -0.30166 -0.00020433 0.4626 0.00031334 677.338112893447 681.344657991765 117.93 0.35623 117.93 117.78 118.14 0 58 20 4 0 0 0 0.0005685 2 75586 74.162 74.162 1 2.7459 2.7682 0 4879600 1704500 3175100 5588 1846 2092 2153 8767;8768 8767 DNGNLCDYDTQNILELK 17 1 0 Unmodified _DNGNLCDYDTQNILELK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1017.4733 2 1012.96512 2023.91568 NaN NaN NaN -0.74814 -0.00075784 NaN NaN NaN NaN 119.07 0.35355 119.07 118.88 119.23 7.6294E-06 0 0 0 0.018775 1 70427 40.278 37.149 1 NaN NaN 0 2229400 0 2229400 5589 1795 2093 2154 8769 8769 DNHFAIFIIPQGR 13 0 1 Unmodified _DNHFAIFIIPQGR_ 0 0 0 B3KNM8;B4E2X3;C4B4C6;Q8N6R0;B3KNI0 B3KNM8 B3KNM8 feat;METTL13 Methyltransferase-like protein 13 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.2769 3 509.940409 1526.7994 NaN NaN NaN 0.11282 5.753E-05 NaN NaN NaN NaN 110.44 0.25842 110.44 110.24 110.5 0 0 0 0 0.0088605 1 69336 43.03 34.725 1 NaN NaN 0 6371300 0 6371300 5590 915 2094 2155 8770 8770 DNHLLGTFDLTGIPPAPR 18 0 1 Unmodified _DNHLLGTFDLTGIPPAPR_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.6772 3 645.34253 1933.00576 75816.41 0.96428 0.00062229 -0.39533 -0.00025512 0.56895 0.00036717 645.342147184301 649.012754386941 115.98 1.2272 115.98 115.47 116.7 0 298 80 5 0 0 0 7.1112E-06 1 73939 70.783 70.783 1 0.74369 0.7667 0 19862000 10051000 9811300 5591 1466 2095 2156 8771 8771 DNHLLGTFDLTGIPPAPR 18 0 1 Unmodified _DNHLLGTFDLTGIPPAPR_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.6794 3 645.34253 1933.00576 75665.38 0.8653 0.00055841 -0.07602 -4.9059E-05 0.78928 0.00050935 645.676646980725 648.678742724785 115.38 1.1542 115.38 114.91 116.06 -7.6294E-06 240 76 5 0 0 0 2.3127E-05 1 75144 50.397 50.397 1 0.8426 0.91109 0 26941000 14029000 12912000 5592 1466 2095 2156 8772 8772 DNHLLGTFDLTGIPPAPR 18 0 1 Unmodified _DNHLLGTFDLTGIPPAPR_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.3433 3 645.34253 1933.00576 75720.55 0.65359 0.00042179 0.26806 0.00017299 0.92165 0.00059478 645.677048470381 649.0135592294 126.74 1.2905 126.74 126.21 127.5 -7.6294E-06 157 55 4 0 0 0 0.013436 1 75110 24.594 24.594 1 0.65891 0.56817 0 3398300 1997500 1400700 5593 1466 2095 2156 8773 8773 DNHNLIER 8 0 1 Unmodified _DNHNLIER_ 0 0 0 A0A0H3W5T2;B4DNC7;A8K5K3;O75030;B1AKB5;C9JBI8;A0A024RCY3;B4DPL3;B0QYS6;B0QYS7;P19484;Q75KY0;A0A1B0GXL9;B1AKB4;B7Z757;O14948;B4DIA5;A0A024QZ23;P19532 A0A0H3W5T2;B4DIA5 B4DIA5 MITF;TFEB;TFEC;TFE3 Microphthalmia-associated transcription factor;Transcription factor EB;Transcription factor EC;Transcription factor E3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.7589 2 505.75433 1009.49411 77201.73 0.38996 0.00019722 -1.1907 -0.00060222 -0.80079 -0.000405 505.753618136807 510.758449067011 23.05 0.70838 23.05 22.686 23.395 0 120 36 6 0 0 0 0.0080145 1 8896 80.455 61.672 1 0.75562 0.81005 0 46111000 27125000 18986000 5594 9;536 2096 2157 8774 8774 DNHNLIER 8 0 1 Unmodified _DNHNLIER_ 0 0 0 A0A0H3W5T2;B4DNC7;A8K5K3;O75030;B1AKB5;C9JBI8;A0A024RCY3;B4DPL3;B0QYS6;B0QYS7;P19484;Q75KY0;A0A1B0GXL9;B1AKB4;B7Z757;O14948;B4DIA5;A0A024QZ23;P19532 A0A0H3W5T2;B4DIA5 B4DIA5 MITF;TFEB;TFEC;TFE3 Microphthalmia-associated transcription factor;Transcription factor EB;Transcription factor EC;Transcription factor E3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.7588 2 505.75433 1009.49411 83655.73 0.44501 0.00022507 0.7247 0.00036652 1.1697 0.00059159 505.754782222336 510.758558707129 22.638 0.47615 22.638 22.46 22.937 0 72 17 7 0 0 0 0.0015574 1 8588 107.9 107.9 1 0.92967 1.0204 0 40337000 21096000 19240000 5595 9;536 2096 2157 8775 8775 DNHNLIER 8 0 1 Unmodified _DNHNLIER_ 0 0 0 A0A0H3W5T2;B4DNC7;A8K5K3;O75030;B1AKB5;C9JBI8;A0A024RCY3;B4DPL3;B0QYS6;B0QYS7;P19484;Q75KY0;A0A1B0GXL9;B1AKB4;B7Z757;O14948;B4DIA5;A0A024QZ23;P19532 A0A0H3W5T2;B4DIA5 B4DIA5 MITF;TFEB;TFEC;TFE3 Microphthalmia-associated transcription factor;Transcription factor EB;Transcription factor EC;Transcription factor E3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.7583 2 505.75433 1009.49411 NaN NaN NaN -0.013759 -6.9585E-06 NaN NaN NaN NaN 24.831 0.45012 24.831 24.65 25.101 1.9073E-06 0 0 0 0.040951 1 8844 53.493 41.004 1 NaN NaN 0 3471000 0 3471000 5596 9;536 2096 2157 8776 8776 DNIDITLQWLIQHSK 15 1 0 Unmodified _DNIDITLQWLIQHSK_ 0 0 0 B4DQT8;A0A024R2D4;B4E1J8;Q9NVJ2;B2R7U5;A0A024R977;Q96BM9 B4DQT8 B4DQT8 ARL8B;ARL8A ADP-ribosylation factor-like protein 8B;ADP-ribosylation factor-like protein 8A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 916.493 2 912.48615 1822.95775 NaN NaN NaN 0.19826 0.00018091 NaN NaN NaN NaN 124.61 0.41742 124.61 124.44 124.86 7.6294E-06 0 0 0 1.9095E-05 1 80981 89.301 77.662 1 NaN NaN 0 3201900 0 3201900 5597 109 2097 2158 8777 8777 DNIQGITK 8 1 0 Unmodified _DNIQGITK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.7437 2 444.742899 887.471246 92267.2 0.042573 1.8934E-05 -0.53892 -0.00023968 -0.49635 -0.00022075 444.742964098364 448.750001753755 21.298 0.51813 21.298 21.094 21.612 0 104 24 6 0 0 0 0.0010749 3 7639 112.37 74.237 1 0.66329 0.71491 0 37742000 22946000 14796000 5598 828 2098 2159 8778;8779;8780 8780 DNIQGITK 8 1 0 Unmodified _DNIQGITK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.7437 2 444.742899 887.471246 NaN NaN NaN 0.13344 5.9346E-05 NaN NaN NaN NaN 28.201 1.4459 28.201 27.816 29.262 -1.9073E-06 0 0 0 3.2524E-05 2 13044 125.5 71.943 1 NaN NaN 0 4862500000 4862500000 0 5599 828 2098 2159 8781;8782 8781 DNIQGITK 8 1 0 Unmodified _DNIQGITK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 444.7431 2 444.742899 887.471246 91480.26 -0.037235 -1.656E-05 -0.79139 -0.00035196 -0.82862 -0.00036852 444.742856579278 448.749946318594 21.146 0.49361 21.146 20.829 21.322 0 132 23 8 0 0 0 0.00081491 2 7358 127.12 90.932 1 0.72901 0.73794 0 29082000 16602000 12480000 5600 828 2098 2159 8783;8784 8784 DNIQGITK 8 1 0 Unmodified _DNIQGITK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 444.7427 2 444.742899 887.471246 89998.88 -0.17893 -7.958E-05 -0.37639 -0.0001674 -0.55533 -0.00024698 444.742990717565 448.749633128465 27.705 0.93895 27.705 27.422 28.361 0 336 49 12 0 0 0 7.7054E-14 2 12864 164.77 106.96 1 0.73116 0.86551 0 2282700000 1348900000 933860000 5601 828 2098 2159 8785;8786 8786 DNIQGITK 8 1 0 Unmodified _DNIQGITK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 445.2442 2 444.742899 887.471246 91797.91 0.12109 5.3854E-05 -0.17143 -7.6244E-05 -0.050346 -2.2391E-05 444.742780418325 448.749659591059 32.171 0.70664 32.171 31.79 32.497 -3.8147E-06 199 66 6 0 0 0 0.027474 1 16105 53.878 3.8378 1 0.72116 0.7669 0 36265000 20641000 15624000 5602 828 2098 2159 8787 8787 DNIQGITK 8 1 0 Unmodified _DNIQGITK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.7497 2 444.742899 887.471246 89367.2 -0.11819 -5.2565E-05 -0.38005 -0.00016902 -0.49824 -0.00022159 444.743251326843 448.749568691706 31.442 1.2632 31.442 31.167 32.43 -1.9073E-06 415 71 8 0 0 0 0.0064556 2 13205 87.181 55.892 1 0.77828 0.69025 0 339430000 190880000 148550000 5603 828 2098 2159 8788;8789 8789 DNIQGITK 8 1 0 Unmodified _DNIQGITK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 444.7429 2 444.742899 887.471246 89354.07 0.092289 4.1045E-05 -0.13268 -5.9009E-05 -0.040392 -1.7964E-05 444.742825098317 448.749782248663 31.573 1.0399 31.573 31.305 32.345 0 278 55 8 0 0 0 0.0029104 2 12827 98.458 56.956 1 0.77493 0.64607 0 41179000 23349000 17830000 5604 828 2098 2159 8790;8791 8791 DNIQGITKPAIR 12 1 1 Unmodified _DNIQGITKPAIR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.3805 2 663.380426 1324.7463 73312.45 0.69307 0.00045977 -0.23766 -0.00015766 0.45541 0.00030211 663.380270812764 672.391476339169 49.182 0.56889 49.182 48.894 49.463 0 269 42 9 0 0 0 9.4792E-05 2 26837 104.52 93.999 1 0.71497 0.86754 0 335590000 197700000 137880000 5605 828 2099 2160 8792;8793 8793 DNIQGITKPAIR 12 1 1 Unmodified _DNIQGITKPAIR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.5895 3 442.589376 1324.7463 NaN NaN NaN -0.21 -9.2945E-05 NaN NaN NaN NaN 49.197 0.47446 49.197 48.913 49.387 0 0 0 0 0.014711 1 27024 61.233 51.181 1 NaN NaN 0 73755000 73755000 0 5606 828 2099 2160 8794 8794 DNIQGITKPAIR 12 1 1 Unmodified _DNIQGITKPAIR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3917 2 663.380426 1324.7463 74189.16 0.50979 0.00033819 0.053568 3.5536E-05 0.56336 0.00037372 663.380474227189 672.391628000692 47.526 0.78347 47.526 47.354 48.138 0 270 54 9 0 0 0 8.0027E-22 2 26368 153.11 143.15 1 0.77227 0.91945 0 508510000 280670000 227850000 5607 828 2099 2160 8795;8796 8795 DNIQGITKPAIR 12 1 1 Unmodified _DNIQGITKPAIR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.5899 3 442.589376 1324.7463 89251.14 0.025874 1.1451E-05 0.31956 0.00014143 0.34543 0.00015288 442.589514505924 448.596987690882 47.531 0.53188 47.531 47.305 47.837 0 131 37 5 0 0 0 5.7951E-05 2 26408 81.431 81.431 1 0.64703 0.76235 0 96542000 52739000 43803000 5608 828 2099 2160 8797;8798 8798 DNIQGITKPAIR 12 1 1 Unmodified _DNIQGITKPAIR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 442.5894 3 442.589376 1324.7463 88619.47 0.059713 2.6428E-05 0.27953 0.00012372 0.33924 0.00015015 442.589452635777 448.596957634099 56.568 0.83668 56.568 56.188 57.025 0 277 52 9 0 0 0 0.0025391 2 28459 43.798 43.798 1 0.84857 0.74326 0 27582000 15730000 11853000 5609 828 2099 2160 8799;8800 8799 DNIQGITKPAIR 12 1 1 Unmodified _DNIQGITKPAIR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.3917 2 663.380426 1324.7463 74130.05 0.66919 0.00044393 -0.17377 -0.00011528 0.49542 0.00032865 663.380368812396 672.391536396425 56.928 1.2616 56.928 56.58 57.842 -3.8147E-06 503 88 10 0 0 0 0.054891 1 27959 46.592 46.592 1 0.92961 0.79423 0 84524000 43824000 40700000 5610 828 2099 2160 8801 8801 DNIQGITKPAIR 12 1 1 Unmodified _DNIQGITKPAIR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 448.5974 3 442.589376 1324.7463 88026.58 0.20343 9.0035E-05 -0.021497 -9.5145E-06 0.18193 8.0521E-05 442.589278223543 448.596877197906 56.948 0.77541 56.948 56.591 57.367 0 273 53 7 0 0 0 0.023181 1 28049 35.204 33.438 1 0.87807 0.74512 0 20880000 11102000 9777500 5611 828 2099 2160 8802 8802 DNLAEDIMR 9 0 1 Oxidation (M) _DNLAEDIM(ox)R_ DNLAEDIM(1)R DNLAEDIM(96.31)R 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.7575 2 546.753138 1091.49172 81013.6 0.71723 0.00039215 -0.23299 -0.00012739 0.48424 0.00026476 546.752964560679 551.757222206954 51.619 1.1283 51.619 51.059 52.187 0 363 99 7 0 0 0 0.00031409 3 28259 96.311 73.925 1 1.4868 1.6961 0 120620000 47873000 72749000 5612 1457 2100 2161 8803;8804;8805 8803 1170 DNLAEDIMR 9 0 1 Oxidation (M) _DNLAEDIM(ox)R_ DNLAEDIM(1)R DNLAEDIM(40.72)R 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.7544 2 546.753138 1091.49172 NaN NaN NaN -0.50971 -0.00027868 NaN NaN NaN NaN 51.398 0.40758 51.398 51.036 51.443 0 0 0 0 0.024376 1 28242 40.724 20.204 1 NaN NaN 0 37641000 37641000 0 5613 1457 2100 2161 8806 8806 1170 DNLAEDIMR 9 0 1 Oxidation (M) _DNLAEDIM(ox)R_ DNLAEDIM(1)R DNLAEDIM(85.16)R 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.7578 2 546.753138 1091.49172 NaN NaN NaN -0.083307 -4.5549E-05 NaN NaN NaN NaN 50.407 0.47993 50.407 49.964 50.444 0 0 0 0 0.00050381 1 28265 85.161 67.014 1 NaN NaN 0 76218000 0 76218000 5614 1457 2100 2161 8807 8807 1170 DNLAEDIMR 9 0 1 Oxidation (M) _DNLAEDIM(ox)R_ DNLAEDIM(1)R DNLAEDIM(57.59)R 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.7564 2 546.753138 1091.49172 NaN NaN NaN -0.021228 -1.1606E-05 NaN NaN NaN NaN 50.577 0.68159 50.577 50.432 51.114 0 0 0 0 0.0067429 1 28786 57.59 36.289 1 NaN NaN 0 54454000 0 54454000 5615 1457 2100 2161 8808 8808 1170 DNLAEDIMR 9 0 1 Oxidation (M) _DNLAEDIM(ox)R_ DNLAEDIM(1)R DNLAEDIM(46.16)R 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.7528 2 546.753138 1091.49172 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.106 1 50.106 49.606 50.606 3.8147E-06 0 0 0 0.02352 1 28285 46.158 31.951 1 5616 1457 2100 2161 8809 8809 1170 DNLAEDIMR 9 0 1 Oxidation (M) _DNLAEDIM(ox)R_ DNLAEDIM(1)R DNLAEDIM(71.49)R 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.7535 2 546.753138 1091.49172 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.824 1 50.824 50.324 51.324 0 0 0 0 0.0015456 1 28729 71.491 45.552 1 5617 1457 2100 2161 8810 8810 1170 DNLAEDIMR 9 0 1 Oxidation (M) _DNLAEDIM(ox)R_ DNLAEDIM(1)R DNLAEDIM(44.72)R 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.7573 2 546.753138 1091.49172 NaN NaN NaN -0.020825 -1.1386E-05 NaN NaN NaN NaN 59.745 0.93726 59.745 59.196 60.133 0 0 0 0 0.017802 1 29710 44.719 32.95 1 NaN NaN 0 2103700 0 2103700 5618 1457 2100 2161 8811 8811 1170 DNLEFFLAGIGR 12 0 1 Unmodified _DNLEFFLAGIGR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3585 2 676.353877 1350.6932 75118.52 1.1424 0.00077268 -0.13818 -9.3456E-05 1.0042 0.00067923 676.353760367215 681.357998150957 127.08 0.57124 127.08 126.85 127.42 7.6294E-06 144 31 6 0 0 0 1.5405E-12 1 82693 127.76 114.98 1 1.4312 1.46 0 14729000 6068400 8661000 5619 587 2101 2162 8812 8812 DNLEFFLAGIGR 12 0 1 Unmodified _DNLEFFLAGIGR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3588 2 676.353877 1350.6932 74613.01 0.91645 0.00061985 -0.34544 -0.00023364 0.57101 0.00038621 676.353626285109 681.357892771588 126.74 0.56224 126.74 126.46 127.02 0 182 34 7 0 0 0 4.2647E-08 1 84466 115.78 101.11 1 1.3362 1.3242 0 15691000 6877800 8813100 5620 587 2101 2162 8813 8813 DNLPLQENVTIQK 13 1 0 Unmodified _DNLPLQENVTIQK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.4066 2 756.406837 1510.79912 69252.3 0.72456 0.00054806 0.013913 1.0524E-05 0.73847 0.00055859 756.406534058987 760.413336117158 80.116 0.92482 80.116 79.626 80.551 0 349 78 8 0 0 0 1.1778E-08 3 47465 113.27 102.11 1 0.97727 1.1037 0 138740000 67973000 70763000 5621 626 2102 2163 8814;8815;8816 8814 DNLPLQENVTIQK 13 1 0 Unmodified _DNLPLQENVTIQK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.4063 2 756.406837 1510.79912 69147.13 0.64448 0.00048749 -0.54349 -0.0004111 0.10099 7.6387E-05 756.406301757679 760.413062299871 79.199 1.2646 79.199 78.379 79.644 0 361 108 8 0 0 0 2.7627E-19 2 47999 148.19 137.03 1 1.0037 1.1223 0 107330000 51794000 55539000 5622 626 2102 2163 8817;8818 8817 DNLPLQENVTIQK 13 1 0 Unmodified _DNLPLQENVTIQK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.4073 2 756.406837 1510.79912 69589.95 0.80271 0.00060717 -0.64203 -0.00048564 0.16067 0.00012154 756.406551571975 760.413061222818 91.392 0.93577 91.392 90.996 91.931 0 261 64 6 0 0 0 9.0776E-05 2 50726 93.345 84.387 1 1.3968 1.0836 0 14116000 6300100 7816000 5623 626 2102 2163 8819;8820 8819 DNLPLQENVTIQK 13 1 0 Unmodified _DNLPLQENVTIQK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 760.4146 2 756.406837 1510.79912 69897.72 0.55192 0.00041748 -0.68758 -0.00052009 -0.13565 -0.00010261 756.406536919147 760.41296104166 91.33 0.98101 91.33 90.828 91.809 0 269 65 9 0 0 0 5.9898E-06 2 49888 105.13 94.61 1 1.3808 1.1115 0 13790000 6054500 7735600 5624 626 2102 2163 8821;8822 8822 DNNGVIGLLEPMKK 14 2 0 Oxidation (M) _DNNGVIGLLEPM(ox)KK_ DNNGVIGLLEPM(1)KK DNNGVIGLLEPM(43.9)KK 0 1 1 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.9288 2 772.411066 1542.80758 70244.78 0.86065 0.00066478 0.06727 5.196E-05 0.92792 0.00071674 772.410699945766 780.425853805403 85.066 0.49662 85.066 84.799 85.296 0 111 41 4 0 0 0 0.012371 1 51051 43.897 37.793 1 0.7014 0.83481 0 22792000 11647000 11145000 5625 550 2103 2164 8823 8823 402 DNNGVIGLLEPMKK 14 2 0 Oxidation (M) _DNNGVIGLLEPM(ox)KK_ DNNGVIGLLEPM(1)KK DNNGVIGLLEPM(60.3)KK 0 1 1 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.4261 2 772.411066 1542.80758 70569.38 1.0301 0.00079567 0.020368 1.5733E-05 1.0505 0.0008114 772.410954076708 780.424853128173 83.913 0.56448 83.913 83.692 84.257 0 164 46 6 0 0 0 0.0011821 1 51548 60.301 60.301 1 1.0761 1.2374 0 24450000 11995000 12455000 5626 550 2103 2164 8824 8824 402 DNNLLGR 7 0 1 Unmodified _DNNLLGR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 406.2182 2 401.214309 800.414065 NaN NaN NaN -0.86077 -0.00034535 NaN NaN NaN NaN 34.222 0.59579 34.222 33.937 34.533 0 0 0 0 0.033026 1 17019 79.146 53.319 1 NaN NaN 0 36234000 0 36234000 5627 533;845 2104 2165 8825 8825 DNPLDPVLAK 10 1 0 Unmodified _DNPLDPVLAK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.3055 2 541.298039 1080.58152 82962.42 0.67514 0.00036545 0.40559 0.00021954 1.0807 0.000585 541.298085961878 545.305299140447 83.21 0.826 83.21 82.788 83.614 0 322 69 6 0 0 0 0.00097865 2 49691 78.149 76.679 1 0.94991 1.0544 0 59503000 32310000 27193000 5628 1958 2105 2166 8826;8827 8827 DNPLDPVLAK 10 1 0 Unmodified _DNPLDPVLAK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.3055 2 541.298039 1080.58152 82163.36 0.52574 0.00028458 0.80261 0.00043445 1.3283 0.00071903 541.298283921232 545.305555654102 82.281 0.88013 82.281 81.87 82.75 0 321 76 5 0 0 0 0.0026988 3 50200 67.897 61.794 1 0.89982 1.007 0 84148000 46263000 37885000 5629 1958 2105 2166 8828;8829;8830 8829 DNPLDPVLAK 10 1 0 Unmodified _DNPLDPVLAK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.3054 2 541.298039 1080.58152 81630.87 0.69021 0.00037361 -0.38935 -0.00021076 0.30086 0.00016285 541.297846413514 545.304863082878 94.178 1.1455 94.178 93.537 94.682 7.6294E-06 295 72 6 0 0 0 0.040061 1 52614 38.754 38.754 1 0.72532 0.56927 0 16926000 9421500 7504600 5630 1958 2105 2166 8831 8831 DNPNLLFNMCGFECR 15 0 1 Oxidation (M) _DNPNLLFNM(ox)CGFECR_ DNPNLLFNM(1)CGFECR DNPNLLFNM(42.1)CGFECR 0 1 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 957.4069 2 951.900213 1901.78587 64948.72 0.67083 0.00063856 -0.58119 -0.00055323 0.089641 8.5329E-05 952.401205815793 956.903826571764 100.43 0.43581 100.43 100.19 100.62 -7.6294E-06 83 36 4 0 0 0 0.0016621 1 63068 42.095 37.55 1 1.2311 1.2237 0 8490200 3712100 4778100 5631 1854 2106 2167 8832 8832 1708 DNPNQYHYVA 10 0 0 Unmodified _DNPNQYHYVA_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.7723 2 610.770177 1219.5258 NaN NaN NaN -0.34415 -0.00021019 NaN NaN NaN NaN 39.056 0.5959 39.056 38.704 39.3 0 0 0 0 0.039802 1 20051 49.442 30.338 1 5632 1718 2107 2168 8833 8833 DNPTAQQIMQLLR 13 0 1 Oxidation (M) _DNPTAQQIM(ox)QLLR_ DNPTAQQIM(1)QLLR DNPTAQQIM(44.32)QLLR 0 1 0 Q08379;Q5HYE0;A0A087WYC0;Q5PXD5 Q08379 Q08379 GOLGA2;DKFZp686K0319 Golgin subfamily A member 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.4033 2 772.398489 1542.78243 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.89 1 105.89 105.39 106.39 0 0 0 0 0.012629 1 65668 44.318 34.662 1 5633 1692 2108 2169 8834 8834 1522 DNQFLAR 7 0 1 Unmodified _DNQFLAR_ 0 0 0 A8KA74;P78316 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.2223 2 432.222134 862.429715 93259.77 0.12108 5.2332E-05 0.41888 0.00018105 0.53995 0.00023338 432.222108656163 437.226269139273 37.986 0.99841 37.986 37.348 38.346 0 263 84 6 0 0 0 0.026655 2 19434 75.269 61.111 1 1.0104 1.0342 0 26247000 13091000 13155000 5634 790 2109 2170 8835;8836 8836 DNQLSEVANK 10 1 0 Unmodified _DNQLSEVANK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;S4R349;S4R402;S4R341 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.2861 2 559.277835 1116.54112 80306 1.1963 0.00066906 0.024963 1.3962E-05 1.2213 0.00068302 559.277728368946 563.284884766638 29.942 0.35272 29.942 29.726 30.079 3.8147E-06 106 26 8 0 0 0 2.9159E-40 1 14549 193.41 183.82 1 1.0625 1.1802 0 49812000 25470000 24343000 5635 468 2110 2171 8837 8837 DNQLSEVANK 10 1 0 Unmodified _DNQLSEVANK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;S4R349;S4R402;S4R341 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.2776 2 559.277835 1116.54112 79602.12 0.58362 0.00032641 -0.16014 -8.9563E-05 0.42348 0.00023684 559.27758403944 563.28500147779 34.411 0.44885 34.411 34.221 34.67 0 126 33 6 0 0 0 0.0037314 1 15180 63.184 63.184 1 0.90545 0.71396 0 5897800 3217300 2680500 5636 468 2110 2171 8838 8838 DNQLSEVANK 10 1 0 Unmodified _DNQLSEVANK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;S4R349;S4R402;S4R341 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.2855 2 559.277835 1116.54112 80110.7 0.66351 0.00037109 -0.19024 -0.0001064 0.47327 0.00026469 559.277470882179 563.284882868664 34.592 0.3868 34.592 34.418 34.804 3.8147E-06 108 27 6 0 0 0 1.2241E-05 2 14817 103.55 93.959 1 0.83176 0.67832 0 5750500 3024500 2726000 5637 468 2110 2171 8839;8840 8839 DNQNFCVPCYEK 12 1 0 Unmodified _DNQNFCVPCYEK_ 0 0 0 I0CE67;Q6I9R8;Q2XQU9;J3KNW4;A0A0A0MSG2;Q14192;Q53T40;Q2TSB7 I0CE67 I0CE67 FHL2;AAG11 Four and a half LIM domains protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.3316 2 787.324133 1572.63371 NaN NaN NaN -0.50168 -0.00039498 NaN NaN NaN NaN 66.118 0.51704 66.118 65.842 66.359 0 0 0 0 0.013633 1 38011 53.569 49.27 1 NaN NaN 0 7241700 0 7241700 5638 478 2111 2172 8841 8841 DNQNFCVPCYEK 12 1 0 Unmodified _DNQNFCVPCYEK_ 0 0 0 I0CE67;Q6I9R8;Q2XQU9;J3KNW4;A0A0A0MSG2;Q14192;Q53T40;Q2TSB7 I0CE67 I0CE67 FHL2;AAG11 Four and a half LIM domains protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.3265 2 787.324133 1572.63371 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.017 1 66.017 65.517 66.517 0 0 0 0 0.018985 1 38060 51.998 45.615 1 5639 478 2111 2172 8842 8842 DNQNFCVPCYEK 12 1 0 Unmodified _DNQNFCVPCYEK_ 0 0 0 I0CE67;Q6I9R8;Q2XQU9;J3KNW4;A0A0A0MSG2;Q14192;Q53T40;Q2TSB7 I0CE67 I0CE67 FHL2;AAG11 Four and a half LIM domains protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.3242 2 787.324133 1572.63371 69785.66 0.50975 0.00040134 -0.18706 -0.00014728 0.32269 0.00025406 787.324221059653 791.331288234403 76.202 0.43323 76.202 75.957 76.391 0 123 27 6 0 0 0 0.023339 1 39787 37.327 37.327 1 1.0465 0.84349 0 3000800 1301700 1699100 5640 478 2111 2172 8843 8843 DNSCVQEIAEK 11 1 0 Unmodified _DNSCVQEIAEK_ 0 0 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.7941 2 646.792992 1291.57143 NaN NaN NaN -0.069934 -4.5233E-05 NaN NaN NaN NaN 36.917 0.2187 36.917 36.87 37.089 0 0 0 0 0.0030718 1 18704 68.49 56.254 1 NaN NaN 0 3494800 3494800 0 5641 1928 2112 2173 8844 8844 DNSHPFVGLAFK 12 1 0 Unmodified _DNSHPFVGLAFK_ 0 0 0 C9IZ01;E5KND7;E5KND5;Q96RP9;D3DNL3;F8WAU4;Q9H9M0 C9IZ01 C9IZ01 GFM1 Elongation factor G, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.3488 2 666.340769 1330.66699 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.215 1 85.215 84.715 85.715 0 0 0 0 0.035364 1 51169 44.309 14.836 1 5642 1126 2113 2174 8845 8845 DNSILPPLDK 10 1 0 Unmodified _DNSILPPLDK_ 0 0 0 A0A087X0K9;Q6MZU1;G5E9E7;A9CQZ8;G3V1L9;Q07157;H0Y3R8;B4DZK4;Q68DX9 A0A087X0K9 A0A087X0K9 TJP1;DKFZp686A1195;DKFZp686M05161 Tight junction protein ZO-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.3102 2 556.303321 1110.59209 NaN NaN NaN -1.0161 -0.00056526 NaN NaN NaN NaN 85.935 0.10181 85.935 85.871 85.973 7.6294E-06 0 0 0 0.0044399 1 52981 72.643 57.977 1 NaN NaN 0 5288100 0 5288100 5643 444 2114 2175 8846 8846 DNTQLLINQLWQLPTER 17 0 1 Unmodified _DNTQLLINQLWQLPTER_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1042.0532 2 1041.55255 2081.09055 60178.74 -0.071298 -7.426E-05 -0.12462 -0.0001298 -0.19592 -0.00020406 1042.05335737102 1047.05806697997 133.37 0.37529 133.37 133.11 133.48 0 37 10 7 0 0 0 2.2497E-81 2 89552 202.13 202.13 1 0.57049 0.65285 0 86430000 46429000 40001000 5644 1750 2115 2176 8847;8848 8847 DNTSVYHISGK 11 1 0 Unmodified _DNTSVYHISGK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.7991 2 610.798934 1219.58332 77376.15 0.45779 0.00027962 0.27969 0.00017083 0.73748 0.00045045 610.799131293651 614.806136433456 27.92 0.55412 27.92 27.708 28.262 0 222 37 9 0 0 0 2.4158E-131 2 12967 265.23 230.45 1 0.84375 1.0003 0 479940000 265510000 214430000 5645 2070 2116 2177 8849;8850 8850 DNTSVYHISGK 11 1 0 Unmodified _DNTSVYHISGK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.7987 2 610.798934 1219.58332 78147.9 0.17465 0.00010667 0.1137 6.9447E-05 0.28834 0.00017612 610.799049739029 614.806033729554 27.375 0.69795 27.375 27.059 27.757 1.9073E-06 176 36 10 0 0 0 2.1351E-95 2 12603 248.11 206.16 1 0.8566 1.0092 0 545890000 289020000 256870000 5646 2070 2116 2177 8851;8852 8852 DNTSVYHISGK 11 1 0 Unmodified _DNTSVYHISGK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.8068 2 610.798934 1219.58332 77160.52 0.2321 0.00014177 0.16047 9.8016E-05 0.39257 0.00023978 610.799165934221 614.806125120955 31.574 0.94279 31.574 31.27 32.212 1.9073E-06 284 55 11 0 0 0 0.03052 1 13251 38.634 34.183 1 1.8043 1.5523 0 90377000 31975000 58403000 5647 2070 2116 2177 8853 8853 DNTSVYHISGK 11 1 0 Unmodified _DNTSVYHISGK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.806 2 610.798934 1219.58332 77468.41 0.46101 0.00028158 -0.43909 -0.0002682 0.021915 1.3386E-05 610.798800200114 614.80575159148 31.679 1.1456 31.679 31.339 32.485 0 322 60 11 0 0 0 0.002583 2 12835 61.363 56.143 1 1.6988 1.4438 0 75914000 27647000 48267000 5648 2070 2116 2177 8854;8855 8854 DNVSSPGGATIHALHVLESGGFR 23 0 1 Unmodified _DNVSSPGGATIHALHVLESGGFR_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;Q8TBX0;J3QKT4;E2QRB3;B7Z8T1;J3KQ22 Q2TU78 Q2TU78 PIG45;PYCR1 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.728 3 774.392612 2320.15601 71333.52 1.1613 0.00089928 -0.36144 -0.00027989 0.79983 0.00061938 774.726276308172 777.729299533503 115.53 0.45735 115.53 115.21 115.67 0 75 22 5 0 0 0 0.015568 2 67750 19.755 16.746 1 0.25751 0.2217 0 7367000 6009300 1357700 5649 259 2117 2178 8856;8857 8857 DNWEDEPQEPQEPNK 15 1 0 Unmodified _DNWEDEPQEPQEPNK_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 927.8929 2 927.892477 1853.7704 64324.43 0.78176 0.00072539 0.047453 4.4031E-05 0.82922 0.00076942 927.892394509699 931.899808963552 48.221 0.52643 48.221 47.935 48.461 0 141 43 5 0 0 0 0.00021588 2 26166 75.479 75.479 1 0.78801 0.80006 0 13591000 7122800 6467900 5650 1859 2118 2179 8858;8859 8859 DNWEDEPQEPQEPNK 15 1 0 Unmodified _DNWEDEPQEPQEPNK_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.9006 2 927.892477 1853.7704 64543.59 0.56137 0.00052089 -0.15543 -0.00014423 0.40593 0.00037666 928.393645389466 931.899440177047 47.242 0.44802 47.242 47.011 47.459 -3.8147E-06 104 33 4 0 0 0 2.8603E-10 1 26117 117.86 117.86 1 0.85181 0.87909 0 18324000 10888000 7435700 5651 1859 2118 2179 8860 8860 DNWEDEPQEPQEPNK 15 1 0 Unmodified _DNWEDEPQEPQEPNK_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 927.8937 2 927.892477 1853.7704 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.08 1 47.08 46.58 47.58 0 0 0 0 0.0012301 1 26088 58.098 52.127 1 5652 1859 2118 2179 8861 8861 DNYPQSVPR 9 0 1 Unmodified _DNYPQSVPR_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.2623 2 538.261988 1074.50942 82962.01 0.98897 0.00053233 -0.37737 -0.00020313 0.6116 0.0003292 538.261870322205 543.26587360446 32.173 0.59834 32.173 31.879 32.478 0 177 55 4 0 0 0 0.001457 1 15893 85.161 81.227 1 1.225 1.2613 0 19703000 8697400 11006000 5653 1088;1189 2119 2180 8862 8862 DPAAGHTEESMTDDK 15 1 0 Unmodified _DPAAGHTEESMTDDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 802.3312 2 802.330666 1602.64678 67798.13 0.062775 5.0366E-05 0.24297 0.00019494 0.30575 0.00024531 802.331043262647 806.338082162797 20.729 0.30214 20.729 20.573 20.875 0 90 15 9 0 0 0 0.025248 1 5559 29.215 29.215 1 3.6497 2.9629 0 4431400 879970 3551400 5654 1569 2120 2181 8863 8863 DPAEGDGAQPEETPR 15 0 1 Unmodified _DPAEGDGAQPEETPR_ 0 0 0 E9PNH1;B4DIW2;F5H6X6;B4DSM6;A0A024R592;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697 E9PNH1 E9PNH1 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.843 2 784.844798 1567.67504 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.538 1 23.538 23.038 24.038 0 0 0 0 1.3279E-11 1 9409 116.24 109.85 1 5655 175 2121 2182 8864 8864 DPAEGDGAQPEETPR 15 0 1 Unmodified _DPAEGDGAQPEETPR_ 0 0 0 E9PNH1;B4DIW2;F5H6X6;B4DSM6;A0A024R592;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697 E9PNH1 E9PNH1 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.3499 2 784.844798 1567.67504 70171.44 0.39704 0.00031162 0.4139 0.00032485 0.81095 0.00063647 785.346847541911 790.350906824236 23.279 0.31205 23.279 23.202 23.514 0 49 14 5 0 0 0 0.00012932 3 9183 80.69 74.655 1 1.1829 1.1935 0 9426600 4865800 4560900 5656 175 2121 2182 8865;8866;8867 8865 DPALNSGVSQKPDPAK 16 2 0 Unmodified _DPALNSGVSQKPDPAK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.4361 2 812.420476 1622.8264 68378.57 0.95314 0.00077435 0.18026 0.00014645 1.1334 0.00092079 812.420190956814 820.434747860369 28.165 0.24285 28.165 28.035 28.278 1.9073E-06 50 17 4 0 0 0 5.5599E-33 2 13195 155.08 155.08 1 0.7932 0.91335 0 9303500 4717600 4585900 5657 1471 2122 2183 8868;8869 8869 DPALNSGVSQKPDPAK 16 2 0 Unmodified _DPALNSGVSQKPDPAK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.4208 2 812.420476 1622.8264 68419.88 0.3472 0.00028208 -0.38744 -0.00031476 -0.040232 -3.2685E-05 812.92218812673 820.434520728623 27.434 0.25804 27.434 27.3 27.558 0 51 12 6 0 0 0 8.4787E-56 2 12719 182.33 182.33 1 0.7492 0.86031 0 22676000 12693000 9983000 5658 1471 2122 2183 8870;8871 8870 DPALNSGVSQKPDPAK 16 2 0 Unmodified _DPALNSGVSQKPDPAK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.9205 2 812.420476 1622.8264 67533.97 0.44474 0.00036132 -0.036809 -2.9904E-05 0.40794 0.00033142 812.419955021123 820.434851685018 32.042 0.50255 32.042 31.83 32.333 0 144 26 8 0 0 0 0.00084822 2 13670 80.746 80.746 1 1.5847 1.3594 0 7948200 3027700 4920500 5659 1471 2122 2183 8872;8873 8873 DPALNSGVSQKPDPAK 16 2 0 Unmodified _DPALNSGVSQKPDPAK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.2921 3 541.94941 1622.8264 83511.29 0.3771 0.00020437 0.056624 3.0687E-05 0.43373 0.00023506 541.949385009498 547.292174751519 32.04 0.55322 32.04 31.85 32.403 0 132 28 7 0 0 0 2.9077E-05 2 13665 73.983 70.787 1 1.3679 1.1771 0 6347500 2833000 3514500 5660 1471 2122 2183 8874;8875 8874 DPALNSGVSQKPDPAK 16 2 0 Unmodified _DPALNSGVSQKPDPAK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.936 2 812.420476 1622.8264 69179.23 0.65069 0.00052863 -0.31903 -0.00025919 0.33165 0.00026944 812.419495849585 820.434563097084 32.189 0.70195 32.189 31.876 32.578 0 179 36 7 0 0 0 0.00060907 2 13293 78.401 78.401 1 1.6699 1.4252 0 4894000 1843400 3050700 5661 1471 2122 2183 8876;8877 8876 DPALNSGVSQKPDPAK 16 2 0 Unmodified _DPALNSGVSQKPDPAK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.9498 3 541.94941 1622.8264 81860.94 0.53034 0.00028742 -0.17795 -9.6439E-05 0.3524 0.00019098 541.949331428931 547.291961722847 32.205 0.61443 32.205 32.003 32.618 0 142 31 6 0 0 0 0.0062743 2 13320 31.876 28.487 1 1.5374 1.3228 0 3468900 1408700 2060200 5662 1471 2122 2183 8878;8879 8878 DPANFQYPAESVLAYK 16 1 0 Unmodified _DPANFQYPAESVLAYK_ 0 0 0 B4DLR8;Q3B792;H3BRK3;P15559;H3BNV2;Q53G81 B4DLR8 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 910.9521 2 906.943784 1811.87302 NaN NaN NaN 0.39092 0.00035454 NaN NaN NaN NaN 107.43 0.45299 107.43 107.19 107.64 0 0 0 0 5.0459E-47 1 66932 163.99 144.75 1 NaN NaN 0 20384000 0 20384000 5663 1000 2123 2184 8880 8880 DPANFQYPAESVLAYK 16 1 0 Unmodified _DPANFQYPAESVLAYK_ 0 0 0 B4DLR8;Q3B792;H3BRK3;P15559;H3BNV2;Q53G81 B4DLR8 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 910.9524 2 906.943784 1811.87302 NaN NaN NaN 0.25947 0.00023533 NaN NaN NaN NaN 106.96 0.46993 106.96 106.65 107.12 0 0 0 0 1.2668E-46 1 68168 156.69 138.88 1 NaN NaN 0 29777000 0 29777000 5664 1000 2123 2184 8881 8881 DPAQPMSPGEATQSGAR 17 0 1 Oxidation (M) _DPAQPM(ox)SPGEATQSGAR_ DPAQPM(1)SPGEATQSGAR DPAQPM(65.56)SPGEATQSGAR 0 1 0 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.3892 2 858.386307 1714.75806 66020.31 0.70981 0.00060929 -0.13028 -0.00011183 0.57953 0.00049746 858.386267526147 863.390415860793 22.131 0.39494 22.131 21.987 22.382 0 100 22 6 0 0 0 3.6517E-05 3 8232 65.563 60.672 1 1.422 1.4897 0 12511000 5586800 6924700 5665 1997 2124 2185 8882;8883;8884 8882 1833 DPAQPMSPGEATQSGAR 17 0 1 Oxidation (M) _DPAQPM(ox)SPGEATQSGAR_ DPAQPM(1)SPGEATQSGAR DPAQPM(88.55)SPGEATQSGAR 0 1 0 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.3858 2 858.386307 1714.75806 66411.35 0.29939 0.00025699 -0.043712 -3.7522E-05 0.25568 0.00021947 858.386352782495 863.390720080239 22.063 0.39557 22.063 21.845 22.241 0 91 17 8 0 0 0 6.1234E-07 2 8054 88.552 84.535 1 1.2733 1.2958 0 20510000 8420800 12089000 5666 1997 2124 2185 8885;8886 8886 1833 DPAQPMSPGEATQSGARPADR 21 0 2 Oxidation (M) _DPAQPM(ox)SPGEATQSGARPADR_ DPAQPM(1)SPGEATQSGARPADR DPAQPM(52.81)SPGEATQSGARPADR 0 1 1 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.006 3 718.999274 2153.97599 NaN NaN NaN -3.4043 -0.0024477 NaN NaN NaN NaN 21.853 0.33552 21.853 21.661 21.996 1.9073E-06 0 0 0 6.3015E-05 1 7881 52.814 36.84 1 NaN NaN 0 4714800 0 4714800 5667 1997 2125 2186 8887 8887 1833 DPEAFLVQIVSK 12 1 0 Unmodified _DPEAFLVQIVSK_ 0 0 0 A0A024R932;Q8N0S6 A0A024R932 A0A024R932 C1orf155;CENPL Centromere protein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.3795 2 673.371735 1344.72892 76322.4 0.79447 0.00053497 -0.031859 -2.1453E-05 0.76261 0.00051352 673.371627668915 677.3788031073 124.12 0.72693 124.12 123.82 124.54 0 162 49 6 0 0 0 0.00012263 3 80456 94.465 91.549 1 1.0867 1.1017 0 6631500 3549500 3082100 5668 269 2126 2187 8888;8889;8890 8888 DPEAFLVQIVSK 12 1 0 Unmodified _DPEAFLVQIVSK_ 0 0 0 A0A024R932;Q8N0S6 A0A024R932 A0A024R932 C1orf155;CENPL Centromere protein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.38 2 673.371735 1344.72892 76400.27 0.78866 0.00053106 0.16024 0.0001079 0.9489 0.00063896 673.371466857859 677.37908950341 123.71 0.73105 123.71 123.31 124.04 0 157 52 6 0 0 0 1.5921E-12 3 82252 127.42 119.38 1 0.8009 0.80782 0 7807800 4346800 3461000 5669 269 2126 2187 8891;8892;8893 8893 DPEDRIPSPLGYAAIPIK 18 1 1 Unmodified _DPEDRIPSPLGYAAIPIK_ 0 0 1 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.3623 3 651.354436 1951.04148 76460.2 0.90519 0.0005896 -0.21686 -0.00014125 0.68833 0.00044835 651.68855268816 657.3616111238 112.34 0.55687 112.34 112.07 112.63 0 194 38 7 0 0 0 8.1235E-06 2 70815 74.338 74.338 1 1.1481 1.3008 0 23634000 10188000 13446000 5670 2133 2127 2188 8894;8895 8895 DPEDRIPSPLGYAAIPIK 18 1 1 Unmodified _DPEDRIPSPLGYAAIPIK_ 0 0 1 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.3618 3 651.354436 1951.04148 74994.11 0.99657 0.00064912 -0.086385 -5.6268E-05 0.91019 0.00059285 651.354511617363 657.361802985507 111.7 0.52294 111.7 111.42 111.94 0 191 34 8 0 0 0 1.3501E-05 2 72017 66.826 66.826 1 1.0606 1.2092 0 20045000 10675000 9369800 5671 2133 2127 2188 8896;8897 8896 DPEDRIPSPLGYAAIPIK 18 1 1 Unmodified _DPEDRIPSPLGYAAIPIK_ 0 0 1 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3555 3 651.354436 1951.04148 74821.47 1.0089 0.00065716 -0.38299 -0.00024946 0.62593 0.0004077 651.354742148575 657.360806732222 122.86 0.74727 122.86 122.46 123.21 0 183 36 10 0 0 0 4.0927E-08 1 73284 86.005 82.225 1 1.4982 1.2908 0 12069000 5201000 6867900 5672 2133 2127 2188 8898 8898 DPEDRIPSPLGYAAIPIK 18 1 1 Unmodified _DPEDRIPSPLGYAAIPIK_ 0 0 1 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.6886 3 651.354436 1951.04148 74128.06 0.93846 0.00061127 -0.51777 -0.00033725 0.42069 0.00027402 651.35444538231 657.360978921547 122.68 0.52928 122.68 122.46 122.99 7.6294E-06 167 25 9 0 0 0 6.897E-06 1 72256 60.564 55.662 1 1.5059 1.2743 0 11618000 4204300 7413900 5673 2133 2127 2188 8899 8899 DPENFPFVVLGNK 13 1 0 Unmodified _DPENFPFVVLGNK_ 0 0 0 A0A158RFU6;P51149;C9J592 A0A158RFU6 A0A158RFU6 RAB7A Ras-related protein Rab-7a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3799 2 738.380091 1474.74563 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.74 1 118.74 118.24 119.24 7.6294E-06 0 0 0 2.1849E-16 1 76243 125.97 104.6 1 5674 628 2128 2189 8900 8900 DPEPEDEVPDVK 12 1 0 Unmodified _DPEPEDEVPDVK_ 0 0 0 P82675 P82675 P82675 MRPS5 28S ribosomal protein S5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.8191 2 684.811904 1367.60926 76497.14 0.70641 0.00048376 -0.010576 -7.2422E-06 0.69584 0.00047652 685.313242631775 688.818816414197 57.408 0.42158 57.408 57.189 57.61 3.8147E-06 106 30 5 0 0 0 0.00034029 1 32437 72.434 57.29 1 1.2212 1.235 0 6854200 2983200 3870900 5675 1668 2129 2190 8901 8901 DPFAHLPK 8 1 0 Unmodified _DPFAHLPK_ 0 0 0 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7581 2 462.750527 923.486502 NaN NaN NaN 1.5647 0.00072407 NaN NaN NaN NaN 50.319 1.0431 50.319 49.914 50.957 0 0 0 0 0.010177 1 28249 77.282 31.262 1 NaN NaN 0 44402000 0 44402000 5676 1522 2130 2191 8902 8902 DPFAHLPK 8 1 0 Unmodified _DPFAHLPK_ 0 0 0 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 462.7503 2 462.750527 923.486502 88113.7 0.15792 7.3078E-05 0.70875 0.00032797 0.86667 0.00040105 462.750293526385 466.758289317998 59.112 0.77686 59.112 58.726 59.503 0 224 61 5 0 0 0 0.020739 1 30121 58.286 23.037 1 1.7176 1.3579 0 4141600 1499600 2642000 5677 1522 2130 2191 8903 8903 DPFAHLPK 8 1 0 Unmodified _DPFAHLPK_ 0 0 0 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.7585 2 462.750527 923.486502 89053.22 0.10766 4.9821E-05 0.77725 0.00035967 0.88491 0.00040949 462.750320819966 466.758213420448 59.42 0.86594 59.42 59.02 59.886 0 234 67 5 0 0 0 0.030669 1 29709 51.787 16.963 1 1.8391 1.4751 0 4198500 1369100 2829500 5678 1522 2130 2191 8904 8904 DPFSSSLQNR 10 0 1 Unmodified _DPFSSSLQNR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.779 2 575.778002 1149.54145 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.519 1 52.519 52.019 53.019 0 0 0 0 4.5146E-08 1 29950 108.74 84.588 1 5679 122 2131 2192 8905 8905 DPGGGAGAITVASHSK 16 1 0 Unmodified _DPGGGAGAITVASHSK_ 0 0 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.8591 2 712.860054 1423.70556 71900.61 0.46914 0.00033443 -0.28243 -0.00020133 0.18671 0.0001331 712.859519890489 716.867328124082 28.426 0.20923 28.426 28.331 28.54 0 36 14 4 0 0 0 4.431E-10 2 13442 112.44 107.99 1 0.73835 0.74064 0 9869800 5121400 4748500 5680 1327 2132 2193 8906;8907 8907 DPGGGAGAITVASHSK 16 1 0 Unmodified _DPGGGAGAITVASHSK_ 0 0 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.8603 2 712.860054 1423.70556 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.799 1 27.799 27.299 28.299 0 0 0 0 6.8687E-05 1 13058 89.43 56.907 1 5681 1327 2132 2193 8908 8908 DPGGITAGSTDEPPMLTK 18 1 0 Oxidation (M) _DPGGITAGSTDEPPM(ox)LTK_ DPGGITAGSTDEPPM(1)LTK DPGGITAGSTDEPPM(40.58)LTK 0 1 0 I3L1Q2;Q8WUZ0 I3L1Q2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.9265 2 901.927474 1801.84039 68133.04 0.74114 0.00066845 -0.26093 -0.00023534 0.4802 0.00043311 901.926360936996 905.934582445761 70.393 0.17637 70.393 70.294 70.471 0 29 13 4 0 0 0 0.0003915 1 40946 40.577 37.255 1 1.0527 1.1023 0 3934200 1865600 2068600 5682 1319 2133 2194 8909 8909 999 DPGGITAGSTDEPPMLTK 18 1 0 Oxidation (M) _DPGGITAGSTDEPPM(ox)LTK_ DPGGITAGSTDEPPM(1)LTK DPGGITAGSTDEPPM(48.66)LTK 0 1 0 I3L1Q2;Q8WUZ0 I3L1Q2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.9333 2 901.927474 1801.84039 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.322 1 68.322 67.822 68.822 0 0 0 0 0.002643 1 40572 48.659 39.705 1 5683 1319 2133 2194 8910 8910 999 DPGVPNSAPFK 11 1 0 Unmodified _DPGVPNSAPFK_ 0 0 0 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.7876 2 564.787838 1127.56112 80791.53 0.41269 0.00023308 0.25884 0.00014619 0.67153 0.00037927 564.787824021192 568.794992932476 58.291 0.74593 58.291 57.903 58.649 0 302 59 7 0 0 0 0.00040918 1 32890 80.755 60.055 1 0.7939 0.86129 0 45348000 24281000 21067000 5684 125 2134 2195 8911 8911 DPGVPNSAPFK 11 1 0 Unmodified _DPGVPNSAPFK_ 0 0 0 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.7957 2 564.787838 1127.56112 81013.64 0.5782 0.00032656 0.093772 5.2962E-05 0.67198 0.00037952 564.787793397982 568.794905967548 57.437 0.60408 57.437 57.057 57.661 -3.8147E-06 281 46 9 0 0 0 0.0016432 1 33068 65.933 52.841 1 0.80981 0.90966 0 117090000 65160000 51926000 5685 125 2134 2195 8912 8912 DPGVPNSAPFK 11 1 0 Unmodified _DPGVPNSAPFK_ 0 0 0 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.7954 2 564.787838 1127.56112 81068.78 0.43476 0.00024555 -0.17016 -9.6102E-05 0.2646 0.00014945 564.787416534978 568.794866369037 67.724 0.5805 67.724 67.413 67.993 0 182 40 7 0 0 0 0.049249 1 34452 34.803 25.006 1 1.1647 0.90799 0 3483900 1688500 1795400 5686 125 2134 2195 8913 8913 DPIDVNYEK 9 1 0 Unmodified _DPIDVNYEK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.7645 2 546.764029 1091.5135 81548.3 0.69994 0.0003827 -0.12661 -6.9228E-05 0.57332 0.00031347 546.763905301657 550.771022157477 49.197 0.79696 49.197 48.904 49.701 3.8147E-06 273 55 7 0 0 0 8.8267E-08 2 26848 140.83 121.86 1 0.7195 0.84817 0 333430000 198610000 134820000 5687 139 2135 2196 8914;8915 8914 DPIDVNYEK 9 1 0 Unmodified _DPIDVNYEK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.7708 2 546.764029 1091.5135 81971.13 0.46622 0.00025491 -0.037958 -2.0754E-05 0.42826 0.00023416 546.763928589633 550.771125526015 48.031 0.75098 48.031 47.792 48.543 0 230 51 7 0 0 0 1.3829E-11 2 26746 152.34 132.55 1 0.63881 0.74653 0 283890000 166960000 116930000 5688 139 2135 2196 8916;8917 8917 DPIDVNYEK 9 1 0 Unmodified _DPIDVNYEK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.7713 2 546.764029 1091.5135 81568.93 0.56011 0.00030625 0.016654 9.1061E-06 0.57677 0.00031536 546.76388151884 550.771123027036 56.389 0.71009 56.389 56.108 56.818 0 215 44 7 0 0 0 0.0068222 2 28318 63.216 59.377 1 1.0489 0.81451 0 14730000 6909300 7821000 5689 139 2135 2196 8918;8919 8919 DPIDVNYEK 9 1 0 Unmodified _DPIDVNYEK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.7716 2 546.764029 1091.5135 80974.88 0.62163 0.00033988 -0.12295 -6.7223E-05 0.49868 0.00027266 546.763880826515 550.770994665747 56.988 0.65429 56.988 56.698 57.352 0 198 43 6 0 0 0 0.00070609 1 28050 95.502 84.636 1 1.1331 0.92003 0 13139000 6231600 6907400 5690 139 2135 2196 8920 8920 DPIPYLPPLEK 11 1 0 Unmodified _DPIPYLPPLEK_ 0 0 0 A8KAQ5;A0A024QZD5;P08621 A8KAQ5 A8KAQ5 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.366 2 641.358096 1280.70164 77617.13 1.0991 0.00070492 0.025685 1.6473E-05 1.1248 0.0007214 641.859906233124 645.364647842099 111.75 0.72968 111.75 111.37 112.1 7.6294E-06 281 52 8 0 0 0 0.0015603 2 70229 72.607 59.088 1 1.0958 1.1929 0 49076000 27508000 21567000 5691 17 2136 2197 8921;8922 8921 DPIPYLPPLEK 11 1 0 Unmodified _DPIPYLPPLEK_ 0 0 0 A8KAQ5;A0A024QZD5;P08621 A8KAQ5 A8KAQ5 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.3649 2 641.358096 1280.70164 77974.88 0.71668 0.00045965 -0.14213 -9.1154E-05 0.57455 0.00036849 641.358113820193 645.364662479862 111.12 0.76379 111.12 110.83 111.59 0 259 53 8 0 0 0 0.019396 2 71440 46.001 38.528 1 1.25 1.2607 0 28163000 11068000 17095000 5692 17 2136 2197 8923;8924 8923 DPIPYLPPLEK 11 1 0 Unmodified _DPIPYLPPLEK_ 0 0 0 A8KAQ5;A0A024QZD5;P08621 A8KAQ5 A8KAQ5 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.3662 2 641.358096 1280.70164 79062.54 0.89226 0.00057226 0.99216 0.00063633 1.8844 0.0012086 641.359430393897 645.365189015518 122.59 0.49493 122.59 122.35 122.85 0 101 24 6 0 0 0 0.033049 1 73057 37.344 37.344 1 0.99728 0.77768 0 3763900 1852800 1911100 5693 17 2136 2197 8925 8925 DPIPYLPPLEK 11 1 0 Unmodified _DPIPYLPPLEK_ 0 0 0 A8KAQ5;A0A024QZD5;P08621 A8KAQ5 A8KAQ5 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.3655 2 641.358096 1280.70164 78195.85 0.91607 0.00058753 0.75189 0.00048223 1.668 0.0010698 641.358889788503 645.365262642312 122.43 0.52235 122.43 122.22 122.74 -7.6294E-06 97 24 6 0 0 0 0.028583 1 72060 39.622 39.622 1 0.94424 0.77403 0 5042900 2433600 2609300 5694 17 2136 2197 8926 8926 DPIVMGVTVEAGQVK 15 1 0 Oxidation (M) _DPIVM(ox)GVTVEAGQVK_ DPIVM(1)GVTVEAGQVK DPIVM(52.25)GVTVEAGQVK 0 1 0 Q8N5A0;A0A087WUT6;O60841;B3KM86;D3DVI5 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.9204 2 779.910898 1557.80724 68709.41 0.83598 0.00065199 0.28255 0.00022036 1.1185 0.00087236 779.911002098297 783.918163451695 82.271 0.79671 82.271 81.741 82.538 0 336 68 9 0 0 0 0.00033094 1 48812 52.247 52.247 1 1.9385 1.9087 0 24148000 10155000 13993000 5695 414 2137 2198 8927 8927 299 DPIVMGVTVEAGQVK 15 1 0 Oxidation (M) _DPIVM(ox)GVTVEAGQVK_ DPIVM(1)GVTVEAGQVK DPIVM(71.08)GVTVEAGQVK 0 1 0 Q8N5A0;A0A087WUT6;O60841;B3KM86;D3DVI5 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.9183 2 779.910898 1557.80724 70082.92 0.78425 0.00061165 0.014188 1.1065E-05 0.79844 0.00062271 779.910548159711 783.917702146979 81.362 0.61424 81.362 80.947 81.561 0 306 52 9 0 0 0 0.00010888 1 49493 71.076 46.566 1 2.0167 2.1827 0 38700000 13680000 25020000 5696 414 2137 2198 8928 8928 299 DPIVNVWYSVNGER 14 0 1 Unmodified _DPIVNVWYSVNGER_ 0 0 0 Q5U0F4;Q53HU7;Q13347;Q5TFK1 Q5U0F4 Q5U0F4 EIF3I Eukaryotic translation initiation factor 3 subunit I ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.4164 2 824.409911 1646.80527 NaN NaN NaN 0.16826 0.00013871 NaN NaN NaN NaN 110.19 0.45627 110.19 109.84 110.3 0 0 0 0 0.00022318 1 69108 84.289 75.101 1 NaN NaN 0 4332200 0 4332200 5697 1711 2138 2199 8929 8929 DPIVNVWYSVNGER 14 0 1 Unmodified _DPIVNVWYSVNGER_ 0 0 0 Q5U0F4;Q53HU7;Q13347;Q5TFK1 Q5U0F4 Q5U0F4 EIF3I Eukaryotic translation initiation factor 3 subunit I ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.415 2 824.409911 1646.80527 NaN NaN NaN 0.61382 0.00050604 NaN NaN NaN NaN 109.56 0.39006 109.56 109.4 109.79 0 0 0 0 0.001754 1 70308 68.44 59.711 1 NaN NaN 0 4291700 0 4291700 5698 1711 2138 2199 8930 8930 DPIVNVWYSVNGER 14 0 1 Unmodified _DPIVNVWYSVNGER_ 0 0 0 Q5U0F4;Q53HU7;Q13347;Q5TFK1 Q5U0F4 Q5U0F4 EIF3I Eukaryotic translation initiation factor 3 subunit I MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.4104 2 824.409911 1646.80527 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.62 1 109.62 109.12 110.12 7.6294E-06 0 0 0 0.053671 1 70416 39.917 24.651 1 5699 1711 2138 2199 8931 8931 DPLLASGTDGVGTK 14 1 0 Unmodified _DPLLASGTDGVGTK_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93;O14660;Q71VH3 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.8543 2 665.846081 1329.67761 74747.53 0.48398 0.00032226 0.22977 0.00015299 0.71376 0.00047525 666.347685287608 669.853424184912 62.191 0.87476 62.191 61.742 62.617 -3.8147E-06 170 75 4 0 0 0 7.6916E-10 3 35634 122.51 108.74 1 2.9443 3.0553 0 11341000 3579300 7761600 5700 1507 2139 2200 8932;8933;8934 8934 DPLLASGTDGVGTK 14 1 0 Unmodified _DPLLASGTDGVGTK_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93;O14660;Q71VH3 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.8539 2 665.846081 1329.67761 73499.85 0.60447 0.00040249 0.48562 0.00032335 1.0901 0.00072584 665.846419224295 669.853566157577 61.28 0.94194 61.28 60.848 61.79 3.8147E-06 188 90 4 0 0 0 8.8594E-07 1 35749 110.08 91.765 1 2.6918 2.8797 0 21156000 5979600 15176000 5701 1507 2139 2200 8935 8935 DPLLLAIIPK 10 1 0 Unmodified _DPLLLAIIPK_ 0 0 0 A8K5Y7;Q9HAV4;B3KPQ5;H0Y9I3 A8K5Y7 A8K5Y7 XPO5 Exportin-5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.865 2 546.854993 1091.69543 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.04 1 129.04 128.54 129.54 0 0 0 0 6.1664E-05 1 84149 84.568 73.346 1 5702 754 2140 2201 8936 8936 DPLLLAIIPK 10 1 0 Unmodified _DPLLLAIIPK_ 0 0 0 A8K5Y7;Q9HAV4;B3KPQ5;H0Y9I3 A8K5Y7 A8K5Y7 XPO5 Exportin-5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.8563 2 546.854993 1091.69543 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.25 1 129.25 128.75 129.75 0 0 0 0 3.4042E-05 1 84268 90.657 71.874 1 5703 754 2140 2201 8937 8937 DPLLLAIIPK 10 1 0 Unmodified _DPLLLAIIPK_ 0 0 0 A8K5Y7;Q9HAV4;B3KPQ5;H0Y9I3 A8K5Y7 A8K5Y7 XPO5 Exportin-5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.8629 2 546.854993 1091.69543 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.74 1 128.74 128.24 129.24 0 0 0 0 1.842E-12 1 86028 124.98 89.688 1 5704 754 2140 2201 8938 8938 DPLPPLDPQAIKPILK 16 2 0 Unmodified _DPLPPLDPQAIKPILK_ 0 0 1 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.0279 3 585.685346 1754.03421 80169.52 0.73297 0.00042929 -0.26002 -0.00015229 0.47295 0.000277 585.685393504468 591.028070292818 112.56 0.43324 112.56 112.32 112.75 0 121 31 5 0 0 0 7.1867E-05 2 71013 73.022 73.022 1 1.9686 2.2789 0 10345000 3702400 6642800 5705 1205 2141 2202 8939;8940 8939 DPLPPLDPQAIKPILK 16 2 0 Unmodified _DPLPPLDPQAIKPILK_ 0 0 1 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8143 3 585.685346 1754.03421 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.08 1 112.08 111.58 112.58 0 0 0 0 0.017926 1 72466 40.801 35.142 1 5706 1205 2141 2202 8941 8941 DPLPPLDPQAIKPILK 16 2 0 Unmodified _DPLPPLDPQAIKPILK_ 0 0 1 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.0206 3 585.685346 1754.03421 NaN NaN NaN 0.090438 5.2968E-05 NaN NaN NaN NaN 123.24 0.29738 123.24 123.08 123.38 0 0 0 0 0.03662 1 73625 37.555 33.086 1 NaN NaN 0 1233200 1233200 0 5707 1205 2141 2202 8942 8942 DPNAFLFDHLLTLK 14 1 0 Unmodified _DPNAFLFDHLLTLK_ 0 0 0 Q7L2H7;J3KNJ2;H0YCQ8 Q7L2H7 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.4507 2 822.443223 1642.87189 68641.63 1.075 0.00088416 -0.42457 -0.00034919 0.65047 0.00053498 822.442764154434 826.951520297194 125.27 0.57916 125.27 125.01 125.59 0 132 37 5 0 0 0 3.2081E-21 2 81407 145 145 1 1.8811 1.869 0 8093500 3060100 5033400 5708 1872 2142 2203 8943;8944 8943 DPNAFLFDHLLTLK 14 1 0 Unmodified _DPNAFLFDHLLTLK_ 0 0 0 Q7L2H7;J3KNJ2;H0YCQ8 Q7L2H7 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.4434 2 822.443223 1642.87189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.87 1 124.87 124.37 125.37 0 0 0 0 0.0062482 1 83132 54.7 40.794 1 5709 1872 2142 2203 8945 8945 DPNAFLFDHLLTLKPVK 17 2 0 Unmodified _DPNAFLFDHLLTLKPVK_ 0 0 1 Q7L2H7;J3KNJ2;H0YCQ8 Q7L2H7 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.0458 3 656.703288 1967.08803 83602.02 0.79259 0.0005205 -0.87688 -0.00057585 -0.084292 -5.5355E-05 656.701818843023 662.380027049335 129.57 0.2614 129.57 129.38 129.65 0 27 11 4 0 0 0 0.0081564 1 78421 26.837 26.837 1 1.5985 1.4203 0 1448600 574400 874210 5710 1872 2143 2204 8946 8946 DPNGPTHSSTLFVR 14 0 1 Unmodified _DPNGPTHSSTLFVR_ 0 0 0 Q9NYB0 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.3882 2 764.381154 1526.74776 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.964 1 49.964 49.464 50.464 0 0 0 0 0.016875 1 27555 45.915 29.662 1 5711 2082 2144 2205 8947 8947 DPNGPTHSSTLFVR 14 0 1 Unmodified _DPNGPTHSSTLFVR_ 0 0 0 Q9NYB0 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.2838 3 509.923195 1526.74776 93744.36 1.0763 0.00054881 -0.04723 -2.4084E-05 1.029 0.00052473 510.257261789697 513.259193229271 49.951 0.27357 49.951 49.794 50.068 0 45 23 4 0 0 0 0.048788 1 27543 25.317 25.317 1 1.3391 1.4029 0 10924000 6458000 4465800 5712 2082 2144 2205 8948 8948 DPNLLLSVSK 10 1 0 Unmodified _DPNLLLSVSK_ 0 0 0 O75530;B4DVW7;E9PJK2 O75530 O75530 EED Polycomb protein EED ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.3221 2 543.313689 1084.61282 NaN NaN NaN 0.88834 0.00048265 NaN NaN NaN NaN 90.482 0.53822 90.482 90.065 90.603 0 0 0 0 0.00054734 1 54692 90.827 68.59 1 NaN NaN 0 10400000 0 10400000 5713 1407 2145 2206 8949 8949 DPNLLLSVSK 10 1 0 Unmodified _DPNLLLSVSK_ 0 0 0 O75530;B4DVW7;E9PJK2 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3207 2 543.313689 1084.61282 82357.52 0.57226 0.00031092 0.48482 0.00026341 1.0571 0.00057433 543.314543082836 547.320671566652 89.482 1.0299 89.482 89.08 90.11 -7.6294E-06 178 85 5 0 0 0 0.0011838 1 55285 74.841 64.576 1 1.0272 1.042 0 26415000 12889000 13526000 5714 1407 2145 2206 8950 8950 DPNTYFIVGTAMVYPEEAEPK 21 1 0 Oxidation (M) _DPNTYFIVGTAM(ox)VYPEEAEPK_ DPNTYFIVGTAM(1)VYPEEAEPK DPNTYFIVGTAM(100.43)VYPEEAEPK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1198.5698 2 1194.05922 2386.10388 55204.99 0.3638 0.0004344 -0.23419 -0.00027963 0.12962 0.00015477 1194.56082207983 1198.06592789956 113.45 0.53881 113.45 113.19 113.73 0 255 40 8 0 0 0 1.5072E-15 3 71773 100.43 100.43 1 1.0041 1.0822 0 37799000 18135000 19664000 5715 1770 2146 2207 8951;8952;8953 8952 1633 DPNTYFIVGTAMVYPEEAEPK 21 1 0 Oxidation (M) _DPNTYFIVGTAM(ox)VYPEEAEPK_ DPNTYFIVGTAM(1)VYPEEAEPK DPNTYFIVGTAM(66.28)VYPEEAEPK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1194.5587 2 1194.05922 2386.10388 55466.36 0.016899 2.0179E-05 -0.21173 -0.00025281 -0.19483 -0.00023263 1194.5604970944 1198.5678759566 112.99 0.55086 112.99 112.72 113.28 0 235 36 9 0 0 0 5.6198E-08 1 73093 66.285 66.285 1 1.0405 1.0666 0 31916000 13711000 18205000 5716 1770 2146 2207 8954 8954 1633 DPNTYFIVGTAMVYPEEAEPK 21 1 0 Oxidation (M) _DPNTYFIVGTAM(ox)VYPEEAEPK_ DPNTYFIVGTAM(1)VYPEEAEPK DPNTYFIVGTAM(85.28)VYPEEAEPK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1198.5686 2 1194.05922 2386.10388 55287.78 0.11214 0.0001339 -0.105 -0.00012538 0.0071348 8.5194E-06 1194.56055505364 1198.5680392991 124.28 0.71178 124.28 123.97 124.68 0 196 29 9 0 0 0 2.4821E-09 1 74387 85.28 85.28 1 0.79656 0.62045 0 15673000 8761700 6911700 5717 1770 2146 2207 8955 8955 1633 DPNTYFIVGTAMVYPEEAEPK 21 1 0 Oxidation (M) _DPNTYFIVGTAM(ox)VYPEEAEPK_ DPNTYFIVGTAM(1)VYPEEAEPK DPNTYFIVGTAM(62.36)VYPEEAEPK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1194.0596 2 1194.05922 2386.10388 54934.69 0.28135 0.00033595 -0.26923 -0.00032147 0.012125 1.4478E-05 1194.56042377711 1198.56737951279 124.22 0.65623 124.22 123.93 124.59 0 186 26 10 0 0 0 7.5482E-08 2 73377 62.357 62.357 1 0.77064 0.62475 0 13255000 7076000 6179300 5718 1770 2146 2207 8956;8957 8956 1633 DPPDPYVSLLLLPDK 15 1 0 Unmodified _DPPDPYVSLLLLPDK_ 0 0 0 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8 B3KY56 B3KY56 FAM62A;ESYT1 Extended synaptotagmin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.4625 2 841.455996 1680.89744 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.56 1 130.56 130.06 131.06 0 0 0 0 0.00093495 1 85138 76.522 50.48 1 5719 320 2147 2208 8958 8958 DPPDPYVSLLLLPDK 15 1 0 Unmodified _DPPDPYVSLLLLPDK_ 0 0 0 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8 B3KY56 B3KY56 FAM62A;ESYT1 Extended synaptotagmin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.9754 2 841.455996 1680.89744 NaN NaN NaN 4.3163 0.003632 NaN NaN NaN NaN 130.24 0.35928 130.24 130.06 130.42 0 0 0 0 0.011843 1 87027 49.448 39.793 1 NaN NaN 0 4570100 0 4570100 5720 320 2147 2208 8959 8959 DPPSEANSIQSANATTK 17 1 0 Unmodified _DPPSEANSIQSANATTK_ 0 0 0 Q8N488 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.9213 2 865.913212 1729.81187 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.846 1 32.846 32.346 33.346 0 0 0 0 0.00048025 1 16376 63.76 51.894 1 5721 1907 2148 2209 8960 8960 DPQFAEDYIFK 11 1 0 Unmodified _DPQFAEDYIFK_ 0 0 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.8258 2 686.824618 1371.63468 77133.5 0.73179 0.00050261 0.071347 4.9003E-05 0.80314 0.00055161 686.82452427136 690.831743441997 103.51 0.53413 103.51 103.23 103.76 -7.6294E-06 127 42 4 0 0 0 0.012738 1 63733 47.706 47.706 1 0.99287 1.0288 0 11238000 6704900 4532900 5722 903 2149 2210 8961 8961 DPQFAEDYIFK 11 1 0 Unmodified _DPQFAEDYIFK_ 0 0 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.8246 2 686.824618 1371.63468 75304.45 0.82341 0.00056553 0.12086 8.3008E-05 0.94426 0.00064854 687.326216137975 690.831793540281 102.87 0.52391 102.87 102.61 103.14 0 132 41 4 0 0 0 0.0045664 1 64962 57.785 57.785 1 1.0605 1.0718 0 8630500 4188200 4442300 5723 903 2149 2210 8962 8962 DPQGPGPGLEAFVSAAK 17 1 0 Unmodified _DPQGPGPGLEAFVSAAK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.9178 2 820.917569 1639.82059 67209.34 0.80657 0.00066213 -1.3491 -0.0011075 -0.54257 -0.00044541 820.917399068155 824.924238889558 106.12 0.53456 106.12 105.83 106.37 -7.6294E-06 128 37 5 0 0 0 0.00015475 1 65760 52.265 46.294 1 1.3123 1.3282 0 18275000 9674600 8600600 5724 1392 2150 2211 8963 8963 DPQGPGPGLEAFVSAAK 17 1 0 Unmodified _DPQGPGPGLEAFVSAAK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.9199 2 820.917569 1639.82059 67272 0.77436 0.00063569 -0.53127 -0.00043613 0.24309 0.00019956 820.917982090573 824.924537602965 105.54 0.74167 105.54 105.1 105.84 0 177 52 6 0 0 0 0.00057841 2 66901 53.3 53.3 1 1.7014 1.7552 0 18285000 6511800 11773000 5725 1392 2150 2211 8964;8965 8964 DPQGPGPGLEAFVSAAK 17 1 0 Unmodified _DPQGPGPGLEAFVSAAK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 824.925 2 820.917569 1639.82059 67115.16 0.7744 0.00063572 -0.77009 -0.00063218 0.004307 3.5357E-06 820.916912964783 824.924512128971 117.45 0.51735 117.45 117.23 117.75 0 116 23 7 0 0 0 0.01784 1 69123 33.456 33.456 1 1.3009 1.0341 0 6589600 2593200 3996500 5726 1392 2150 2211 8966 8966 DPQTPVLQTK 10 1 0 Unmodified _DPQTPVLQTK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.8083 2 563.808771 1125.60299 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.813 1 40.813 40.313 41.313 -3.8147E-06 0 0 0 0.027673 1 21863 50.353 6.5842 1 5727 1837 2151 2212 8967 8967 DPQTPVLQTK 10 1 0 Unmodified _DPQTPVLQTK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.8166 2 563.808771 1125.60299 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.978 1 40.978 40.478 41.478 0 0 0 0 0.0045944 1 21981 64.654 50.118 1 5728 1837 2151 2212 8968 8968 DPQTPVLQTK 10 1 0 Unmodified _DPQTPVLQTK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.8156 2 563.808771 1125.60299 82772.85 0.22645 0.00012768 0.30048 0.00016941 0.52693 0.00029709 563.809093493394 567.815952278923 47.875 0.8099 47.875 47.453 48.263 0 152 64 4 0 0 0 0.047781 1 22692 36.514 36.514 1 1.3098 1.0239 0 2094800 831830 1263000 5729 1837 2151 2212 8969 8969 DPSFRPTAK 9 1 1 Unmodified _DPSFRPTAK_ 0 0 1 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;Q96SR7 Q8NBY1 Q8NBY1 STK26;MST4 Serine/threonine-protein kinase 26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.7807 2 509.769448 1017.52434 86830.14 0.29057 0.00014812 -0.16788 -8.558E-05 0.12268 6.2541E-05 509.768948250466 518.780663556735 22.534 0.46369 22.534 22.382 22.845 0 133 28 8 0 0 0 0.002068 2 8549 100.02 60.354 1 1.7387 1.9466 0 21076000 7431400 13644000 5730 1065 2152 2213 8970;8971 8970 DPSFRPTAK 9 1 1 Unmodified _DPSFRPTAK_ 0 0 1 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;Q96SR7 Q8NBY1 Q8NBY1 STK26;MST4 Serine/threonine-protein kinase 26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.7806 2 509.769448 1017.52434 83260.38 0.3903 0.00019897 -0.99281 -0.0005061 -0.6025 -0.00030714 509.767816538302 518.780344436314 22.309 0.45227 22.309 22.158 22.611 -1.9073E-06 79 19 6 0 0 0 0.0001362 2 8306 113.71 68.985 1 1.2341 1.4322 0 36977000 14419000 22558000 5731 1065 2152 2213 8972;8973 8972 DPSGLFYILPFQK 13 1 0 Unmodified _DPSGLFYILPFQK_ 0 0 0 F8VP72;F8W043;F8W0Q1;Q9P0A0;F8VRL1;F8W057;Q9GZN1 F8VP72 F8VP72 ACTR6 Actin-related protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.4103 2 762.908485 1523.80242 71980.94 0.87753 0.00066948 0.28836 0.00022 1.1659 0.00088947 763.410797626242 767.416549245169 133.01 0.36584 133.01 132.82 133.19 0 37 16 4 0 0 0 0.00034992 1 89220 63.216 63.216 1 0.50965 0.54674 0 3815500 2642800 1172700 5732 1258 2153 2214 8974 8974 DPSLPAASSSSSSSK 15 1 0 Unmodified _DPSLPAASSSSSSSK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPJ1;D2CPJ3 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.8357 2 704.333535 1406.65252 77040.19 0.69994 0.00049299 -0.42425 -0.00029881 0.27569 0.00019418 704.834873703628 708.340069547698 33.478 0.25631 33.478 33.359 33.615 0 57 20 4 0 0 0 0.021318 2 14687 33.761 33.761 1 1.057 0.88089 0 2247800 1113900 1133900 5733 118 2154 2215 8975;8976 8976 DPSLPVASSSSSSSK 15 1 0 Unmodified _DPSLPVASSSSSSSK_ 0 0 0 D2CPI8 D2CPI8 D2CPI8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.3516 2 718.349185 1434.68382 72172.38 0.81558 0.00058587 -0.4538 -0.00032599 0.36177 0.00025988 718.349149531696 722.857087604247 43.691 0.73147 43.691 43.404 44.135 3.8147E-06 235 65 6 0 0 0 1.1373E-05 1 23355 91.961 86.18 1 0.81676 0.86946 0 31825000 13148000 18677000 5734 1184 2155 2216 8977 8977 DPSLPVASSSSSSSK 15 1 0 Unmodified _DPSLPVASSSSSSSK_ 0 0 0 D2CPI8 D2CPI8 D2CPI8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.8581 2 718.349185 1434.68382 71739.92 1.0228 0.00073471 0.11517 8.273E-05 1.1379 0.00081744 718.349009936445 722.356851869095 43.284 0.73858 43.284 42.921 43.659 0 197 60 5 0 0 0 0.0042437 1 23346 39.785 36.933 1 0.4824 0.48721 0 28515000 15774000 12741000 5735 1184 2155 2216 8978 8978 DPSLPVASSSSSSSK 15 1 0 Unmodified _DPSLPVASSSSSSSK_ 0 0 0 D2CPI8 D2CPI8 D2CPI8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.3493 2 718.349185 1434.68382 71966.73 0.60513 0.00043469 -0.11479 -8.2461E-05 0.49033 0.00035223 718.349008825689 722.356264578827 50.191 0.85913 50.191 49.802 50.661 0 398 71 9 0 0 0 0.00022383 3 24504 73.632 69.745 1 1.1325 0.90094 0 6649700 3530200 3119400 5736 1184 2155 2216 8979;8980;8981 8979 DPSLPVASSSSSSSK 15 1 0 Unmodified _DPSLPVASSSSSSSK_ 0 0 0 D2CPI8 D2CPI8 D2CPI8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.3569 2 718.349185 1434.68382 NaN NaN NaN -0.24741 -0.00017773 NaN NaN NaN NaN 50.558 1.0926 50.558 50.034 51.126 0 0 0 0 4.8499E-05 1 24146 83.182 83.182 1 NaN NaN 0 3412900 0 3412900 5737 1184 2155 2216 8982 8982 DPSLSDSSTVGLQR 14 0 1 Unmodified _DPSLSDSSTVGLQR_ 0 0 0 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.8634 2 731.362627 1460.7107 NaN NaN NaN -0.97543 -0.00071339 NaN NaN NaN NaN 59.9 0.42419 59.9 59.669 60.093 0 0 0 0 0.021038 1 34830 44.612 32.565 1 NaN NaN 0 5668200 5668200 0 5738 353 2156 2217 8983 8983 DPSSDLHLLLDQSK 14 1 0 Unmodified _DPSSDLHLLLDQSK_ 0 0 0 Q4KMR5;E9PH99;Q9Y4E5 Q4KMR5 Q4KMR5 ZNF451 Zinc finger protein 451 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.4075 2 784.401752 1566.78895 68708.15 1.0459 0.00082044 -0.87507 -0.0006864 0.17088 0.00013404 784.401065297122 788.407865337352 95.904 0.42893 95.904 95.635 96.064 0 82 34 4 0 0 0 0.033972 1 59754 30.004 30.004 1 1.0683 1.0711 0 13824000 6784500 7039200 5739 1236 2157 2218 8984 8984 DPTEHIPEIILNNFTTR 17 0 1 Unmodified _DPTEHIPEIILNNFTTR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.6821 3 670.681211 2009.0218 73893.8 1.053 0.00070626 0.21299 0.00014285 1.266 0.00084911 671.015212382426 674.351584965012 117.15 0.62679 117.15 116.87 117.5 -7.6294E-06 275 44 8 0 0 0 2.29E-05 3 74892 54.004 54.004 1 0.90876 0.92157 0 28686000 15891000 12795000 5740 2048 2158 2219 8985;8986;8987 8987 DPTEHIPEIILNNFTTR 17 0 1 Unmodified _DPTEHIPEIILNNFTTR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.0165 3 670.681211 2009.0218 72585.59 0.60765 0.00040754 0.22004 0.00014758 0.82769 0.00055512 671.014953541591 674.017325735518 116.56 0.58632 116.56 116.31 116.9 0 210 36 8 0 0 0 2.118E-05 3 76176 67.646 67.646 1 1.0555 1.1563 0 31627000 14242000 17385000 5741 2048 2158 2219 8988;8989;8990 8989 DPTEHIPEIILNNFTTR 17 0 1 Unmodified _DPTEHIPEIILNNFTTR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.3521 3 670.681211 2009.0218 72956.73 1.111 0.00074515 -0.049664 -3.3309E-05 1.0614 0.00071184 671.015332635904 674.017185051762 128.45 0.50148 128.45 128.28 128.78 0 117 21 8 0 0 0 1.8832E-05 2 77556 64.52 64.52 1 0.94908 0.80523 0 5135000 3046400 2088600 5742 2048 2158 2219 8991;8992 8991 DPTEHIPEIILNNFTTR 17 0 1 Unmodified _DPTEHIPEIILNNFTTR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.6808 3 670.681211 2009.0218 73881.27 0.80403 0.00053925 -0.16769 -0.00011247 0.63634 0.00042678 671.015052923857 674.017166117063 128.31 0.59015 128.31 128.04 128.63 0 125 24 9 0 0 0 2.4514E-05 2 76516 50.053 50.053 1 0.90581 0.75152 0 5344600 2858000 2486600 5743 2048 2158 2219 8993;8994 8994 DPTNDLTFYVSQK 13 1 0 Unmodified _DPTNDLTFYVSQK_ 0 0 0 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 768.8771 2 764.369921 1526.72529 NaN NaN NaN -0.9747 -0.00074503 NaN NaN NaN NaN 105.33 0.77411 105.33 104.92 105.7 0 0 0 0 0.011136 1 60084 52.555 35.529 1 NaN NaN 0 2084900 0 2084900 5744 1984 2159 2220 8995 8995 DPTPSFYDLWAQEDPNAVLGR 21 0 1 Unmodified _DPTPSFYDLWAQEDPNAVLGR_ 0 0 0 Q14137;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1196.5723 2 1196.06622 2390.11789 NaN NaN NaN 0.16041 0.00019186 NaN NaN NaN NaN 129.04 0.49443 129.04 128.82 129.32 -1.5259E-05 0 0 0 1.1863E-18 2 86098 103.76 97.033 1 NaN NaN 0 10983000 10983000 0 5745 1726 2160 2221 8996;8997 8997 DPVQEAWAEDVDLR 14 0 1 Unmodified _DPVQEAWAEDVDLR_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;B4DRT3;Q8WUW7;Q504U3;H3BR70 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.394 2 821.889009 1641.76346 68627.59 1.1341 0.00093211 -0.025221 -2.0728E-05 1.1089 0.00091138 822.390383690593 826.89306044821 114.36 0.63272 114.36 114.08 114.71 0 138 27 7 0 0 0 0.00014952 1 66710 94.122 79.964 1 1.9592 1.6841 0 6607100 2278200 4328800 5746 1481 2161 2222 8998 8998 DPVTIDCGHVFCR 13 0 1 Unmodified _DPVTIDCGHVFCR_ 0 0 0 A0A024RCP3;Q12899;A2AE48;A0A0G2JIW2;A2AE50;Q5SPU2 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.3583 2 788.355767 1574.69698 NaN NaN NaN 0.4826 0.00038046 NaN NaN NaN NaN 67.28 0.42573 67.28 67.07 67.495 0 0 0 0 1.5027E-05 1 38916 94.692 86.826 1 NaN NaN 0 3383000 3383000 0 5747 365 2162 2223 8999 8999 DPVTTGTPQPPQR 13 0 1 Unmodified _DPVTTGTPQPPQR_ 0 0 0 W5ZR30;Q9UGU0;I3L1M7 W5ZR30 W5ZR30 TCF20 Transcription factor 20 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.8632 2 697.357148 1392.69974 NaN NaN NaN -0.39862 -0.00027798 NaN NaN NaN NaN 35.962 0.13638 35.962 35.879 36.015 0 0 0 0 0.012343 1 18154 51.927 41.696 1 NaN NaN 0 2519100 0 2519100 5748 2100 2163 2224 9000 9000 DPVTTGTPQPPQR 13 0 1 Unmodified _DPVTTGTPQPPQR_ 0 0 0 W5ZR30;Q9UGU0;I3L1M7 W5ZR30 W5ZR30 TCF20 Transcription factor 20 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.859 2 697.357148 1392.69974 NaN NaN NaN -0.072913 -5.0846E-05 NaN NaN NaN NaN 36.087 0.27428 36.087 35.949 36.223 0 0 0 0 1.0167E-05 1 18156 98.249 86.759 1 NaN NaN 0 2575600 2575600 0 5749 2100 2163 2224 9001 9001 DPVTTGTPQPPQR 13 0 1 Unmodified _DPVTTGTPQPPQR_ 0 0 0 W5ZR30;Q9UGU0;I3L1M7 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.3612 2 697.357148 1392.69974 73959.73 0.24494 0.00017081 0.36035 0.0002513 0.6053 0.00042211 697.357527579705 702.361214694006 41.549 0.67582 41.549 41.196 41.872 0 147 50 5 0 0 0 0.0029277 1 18782 51.762 47.875 1 1.4139 1.2317 0 1500200 546820 953370 5750 2100 2163 2224 9002 9002 DPYCHPVCANR 11 0 1 Unmodified _DPYCHPVCANR_ 0 0 0 Q9Y5Q8;Q5T7U1;Q5T7U4 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.7989 2 694.795346 1387.57614 NaN NaN NaN 0.37386 0.00025976 NaN NaN NaN NaN 20.27 0.1865 20.27 20.164 20.35 0 0 0 0 0.03872 1 6601 47.603 39.382 1 NaN NaN 0 1984500 0 1984500 5751 2149 2164 2225 9003 9003 DPYSGSTISLFQAMQK 16 1 0 Oxidation (M) _DPYSGSTISLFQAM(ox)QK_ DPYSGSTISLFQAM(1)QK DPYSGSTISLFQAM(72.34)QK 0 1 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 898.9361 2 894.927277 1787.84 NaN NaN NaN -0.064422 -5.7653E-05 NaN NaN NaN NaN 96.667 0.49149 96.667 96.501 96.993 0 0 0 0 5.8377E-05 2 58867 72.34 63.93 1 NaN NaN 0 6003600 0 6003600 5752 1754 2165 2226 9004;9005 9005 1609 DPYTEQTISLFQAMK 15 1 0 Oxidation (M) _DPYTEQTISLFQAM(ox)K_ DPYTEQTISLFQAM(1)K DPYTEQTISLFQAM(40.62)K 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.9321 2 894.429652 1786.84475 65890.48 0.70061 0.00062665 -0.024961 -2.2326E-05 0.67565 0.00060432 894.429834054889 898.436879067902 104.77 0.57295 104.77 104.5 105.07 7.6294E-06 189 47 6 0 0 0 0.0019143 1 64850 40.616 40.616 1 2.1673 2.1986 0 10238000 3960900 6277200 5753 1754 2166 2227 9006 9006 1610 DPYTEQTISLFQAMK 15 1 0 Oxidation (M) _DPYTEQTISLFQAM(ox)K_ DPYTEQTISLFQAM(1)K DPYTEQTISLFQAM(58.27)K 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.431 2 894.429652 1786.84475 65221.51 0.62713 0.00056093 0.068409 6.1187E-05 0.69554 0.00062211 894.930942372993 898.436623805977 104.23 0.59064 104.23 103.94 104.53 0 161 48 5 0 0 0 0.00019441 1 65953 58.274 49.32 1 2.2856 2.3524 0 11615000 4201900 7412600 5754 1754 2166 2227 9007 9007 1610 DQAEEEPNRIPSR 13 0 2 Unmodified _DQAEEEPNRIPSR_ 0 0 1 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.371 2 770.87115 1539.72775 68800.69 0.80939 0.00062393 -0.23961 -0.00018471 0.56978 0.00043923 770.870970233878 780.879322983062 23.92 0.24802 23.92 23.813 24.061 -1.9073E-06 39 12 5 0 0 0 0.0056386 1 9728 59.426 59.426 1 0.58534 0.65157 0 8864300 5016700 3847600 5755 1738 2167 2228 9008 9008 DQAEEEPNRIPSR 13 0 2 Unmodified _DQAEEEPNRIPSR_ 0 0 1 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.8714 2 770.87115 1539.72775 70278.64 0.56448 0.00043514 0.017346 1.3371E-05 0.58183 0.00044851 770.871075365125 780.879739891809 23.659 0.23442 23.659 23.514 23.748 1.9073E-06 43 8 9 0 0 0 4.1044E-05 1 9475 103.08 103.08 1 0.61043 0.67151 0 21043000 12116000 8927000 5756 1738 2167 2228 9009 9009 DQAVMISGESGAGK 14 1 0 Oxidation (M) _DQAVM(ox)ISGESGAGK_ DQAVM(1)ISGESGAGK DQAVM(63.6)ISGESGAGK 0 1 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.3191 2 683.319373 1364.62419 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.251 1 29.251 28.751 29.751 -1.9073E-06 0 0 0 0.001096 1 14122 63.602 48.665 1 5757 1088 2168 2229 9010 9010 832 DQAVMISGESGAGK 14 1 0 Oxidation (M) _DQAVM(ox)ISGESGAGK_ DQAVM(1)ISGESGAGK DQAVM(69.03)ISGESGAGK 0 1 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3263 2 683.319373 1364.62419 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.295 1 29.295 28.795 29.795 0 0 0 0 0.00084332 1 14157 69.03 31.686 1 5758 1088 2168 2229 9011 9011 832 DQAVMISGESGAGK 14 1 0 Oxidation (M) _DQAVM(ox)ISGESGAGK_ DQAVM(1)ISGESGAGK DQAVM(62.45)ISGESGAGK 0 1 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.3185 2 683.319373 1364.62419 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.684 1 28.684 28.184 29.184 -1.9073E-06 0 0 0 0.0011495 1 13740 62.454 39.874 1 5759 1088 2168 2229 9012 9012 832 DQAWDDVVR 9 0 1 Unmodified _DQAWDDVVR_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.2584 2 552.259445 1102.50434 NaN NaN NaN 0.34091 0.00018827 NaN NaN NaN NaN 70.017 0.38448 70.017 69.851 70.235 0 0 0 0 0.052695 1 40627 46.158 32.781 1 NaN NaN 0 4947000 4947000 0 5760 924 2169 2230 9013 9013 DQDAIETDAMIK 12 1 0 Oxidation (M) _DQDAIETDAM(ox)IK_ DQDAIETDAM(1)IK DQDAIETDAM(99.28)IK 0 1 0 P35251;H0Y9P8 P35251 P35251 RFC1 Replication factor C subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.3133 2 683.313757 1364.61296 NaN NaN NaN 0.012077 8.2525E-06 NaN NaN NaN NaN 51.618 0.50563 51.618 51.464 51.97 0 0 0 0 8.9441E-06 1 28582 99.283 80.503 1 NaN NaN 0 9558700 9558700 0 5761 1542 2170 2231 9014 9014 1299 DQDAIETDAMIK 12 1 0 Oxidation (M) _DQDAIETDAM(ox)IK_ DQDAIETDAM(1)IK DQDAIETDAM(110.53)IK 0 1 0 P35251;H0Y9P8 P35251 P35251 RFC1 Replication factor C subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3217 2 683.313757 1364.61296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.799 1 51.799 51.299 52.299 0 0 0 0 6.9771E-11 1 28694 110.53 85.758 1 5762 1542 2170 2231 9015 9015 1299 DQDAIETDAMIK 12 1 0 Oxidation (M) _DQDAIETDAM(ox)IK_ DQDAIETDAM(1)IK DQDAIETDAM(47.3)IK 0 1 0 P35251;H0Y9P8 P35251 P35251 RFC1 Replication factor C subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.8516 2 683.313757 1364.61296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.916 1 51.916 51.416 52.416 0 0 0 0 0.012528 1 28777 47.302 33.532 1 5763 1542 2170 2231 9016 9016 1299 DQDLEPGAPSMGAK 14 1 0 Oxidation (M) _DQDLEPGAPSM(ox)GAK_ DQDLEPGAPSM(1)GAK DQDLEPGAPSM(59.84)GAK 0 1 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3326 2 716.324656 1430.63476 NaN NaN NaN 0.34621 0.000248 NaN NaN NaN NaN 31.234 0.076231 31.234 31.196 31.272 -1.9073E-06 0 0 0 0.0012776 1 15409 59.84 41.528 1 NaN NaN 0 3029700 0 3029700 5764 1454 2171 2232 9017 9017 1158 DQDLEPGAPSMGAK 14 1 0 Oxidation (M) _DQDLEPGAPSM(ox)GAK_ DQDLEPGAPSM(1)GAK DQDLEPGAPSM(73.65)GAK 0 1 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.325 2 716.324656 1430.63476 73653.21 0.63036 0.00045154 -0.052941 -3.7923E-05 0.57742 0.00041362 716.324850114212 720.331888807994 30.978 0.6243 30.978 30.707 31.331 0 141 54 5 0 0 0 8.2199E-05 1 15282 73.655 67.622 1 3.5258 3.5417 0 13667000 2610700 11056000 5765 1454 2171 2232 9018 9018 1158 DQDLITIIGK 10 1 0 Unmodified _DQDLITIIGK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7C2D1;Q2HJC8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.3193 2 558.318971 1114.62339 82020.99 0.68971 0.00038508 0.58196 0.00032492 1.2717 0.00071 558.319201078859 562.326088151768 101.15 0.89781 101.15 100.9 101.8 0 236 69 5 0 0 0 0.013553 1 63795 49.418 39.431 1 1.4767 1.4993 0 16695000 7074800 9620500 5766 154 2172 2233 9019 9019 DQDLTIPESSTVK 13 1 0 Unmodified _DQDLTIPESSTVK_ 0 0 0 K7EQB2 K7EQB2 K7EQB2 GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.8698 2 716.861928 1431.7093 74302.12 0.51495 0.00036915 0.3999 0.00028668 0.91486 0.00065583 716.862643534273 721.370726279265 67.593 0.42453 67.593 67.4 67.825 0 117 34 5 0 0 0 0.00012565 1 40123 78.342 72.561 1 1.267 1.3038 0 18025000 7570300 10454000 5767 1346 2173 2234 9020 9020 DQDLTIPESSTVK 13 1 0 Unmodified _DQDLTIPESSTVK_ 0 0 0 K7EQB2 K7EQB2 K7EQB2 GLYR1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.8694 2 716.861928 1431.7093 NaN NaN NaN -0.11045 -7.9176E-05 NaN NaN NaN NaN 78.785 0.59341 78.785 78.478 79.071 0 0 0 0 0.0042973 1 41470 61.958 52.005 1 NaN NaN 0 1917100 0 1917100 5768 1346 2173 2234 9021 9021 DQEALEAVK 9 1 0 Unmodified _DQEALEAVK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.7654 2 501.758746 1001.50294 84724.41 0.44742 0.0002245 0.363 0.00018214 0.81042 0.00040664 501.759158820912 505.765808113816 37.015 1.1254 37.015 36.365 37.491 0 478 101 7 0 0 0 0.0018407 2 18616 80.165 26.143 1 0.71168 0.8048 0 146630000 78653000 67978000 5769 69 2174 2235 9022;9023 9022 DQEALEAVK 9 1 0 Unmodified _DQEALEAVK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.7661 2 501.758746 1001.50294 83721.05 0.41821 0.00020984 0.21457 0.00010766 0.63277 0.0003175 501.759028802456 505.765700112783 36.171 1.0446 36.171 35.666 36.711 0 422 85 9 0 0 0 0.00031179 3 18372 102.51 47.157 1 0.73388 0.83973 0 160820000 88418000 72400000 5770 69 2174 2235 9024;9025;9026 9024 DQEALEAVK 9 1 0 Unmodified _DQEALEAVK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1002.9597 1 1002.51022 1001.50294 61828.65 0.52951 0.00053084 0.312 0.00031278 0.84151 0.00084362 1002.51024922425 1010.52511553624 36.166 0.61873 36.166 35.827 36.446 0 158 52 4 0 0 0 1.4829E-10 1 18670 140.45 50.748 1 0.79645 0.81565 0 25583000 14387000 11196000 5771 69 2174 2235 9027 9027 DQEALEAVK 9 1 0 Unmodified _DQEALEAVK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.7589 2 501.758746 1001.50294 83289.47 0.21926 0.00011002 -0.036538 -1.8333E-05 0.18273 9.1685E-05 501.758785913569 505.765719222215 41.795 1.0879 41.795 41.294 42.382 0 419 86 8 0 0 0 0.0021143 2 19401 76.605 31.838 1 1.7077 1.3949 0 33536000 12517000 21019000 5772 69 2174 2235 9028;9029 9029 DQEALEAVK 9 1 0 Unmodified _DQEALEAVK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.7657 2 501.758746 1001.50294 85059.6 -0.063019 -3.1621E-05 0.18003 9.0333E-05 0.11701 5.8712E-05 501.758912003169 505.765808881775 41.876 1.4137 41.876 41.374 42.788 0 493 102 8 0 0 0 0.0010522 3 18816 90.657 31.809 1 1.7364 1.4005 0 23229000 9048800 14180000 5773 69 2174 2235 9030;9031;9032 9030 DQEEEMDYAPDDVYDYK 17 1 0 Oxidation (M) _DQEEEM(ox)DYAPDDVYDYK_ DQEEEM(1)DYAPDDVYDYK DQEEEM(82.07)DYAPDDVYDYK 0 1 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1075.4216 2 1070.91241 2139.81028 NaN NaN NaN -0.093423 -0.00010005 NaN NaN NaN NaN 75.101 0.48869 75.101 74.869 75.358 0 0 0 0 3.8286E-07 1 44028 82.069 82.069 1 NaN NaN 0 8580800 0 8580800 5774 46 2175 2236 9033 9033 26 DQEEEMDYAPDDVYDYK 17 1 0 Oxidation (M) _DQEEEM(ox)DYAPDDVYDYK_ DQEEEM(1)DYAPDDVYDYK DQEEEM(42.79)DYAPDDVYDYK 0 1 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1070.9124 2 1070.91241 2139.81028 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.029 1 75.029 74.529 75.529 0 0 0 0 0.0093541 1 44078 42.789 41.088 1 5775 46 2175 2236 9034 9034 26 DQEEEMDYAPDDVYDYK 17 1 0 Oxidation (M) _DQEEEM(ox)DYAPDDVYDYK_ DQEEEM(1)DYAPDDVYDYK DQEEEM(86.47)DYAPDDVYDYK 0 1 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1075.4194 2 1070.91241 2139.81028 NaN NaN NaN -0.072023 -7.713E-05 NaN NaN NaN NaN 74.389 0.46118 74.389 74.101 74.562 0 0 0 0 2.3049E-07 1 44617 86.467 86.467 1 NaN NaN 0 8030200 0 8030200 5776 46 2175 2236 9035 9035 26 DQEEEMDYAPDDVYDYK 17 1 0 Oxidation (M) _DQEEEM(ox)DYAPDDVYDYK_ DQEEEM(1)DYAPDDVYDYK DQEEEM(50.9)DYAPDDVYDYK 0 1 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1070.9135 2 1070.91241 2139.81028 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.229 1 74.229 73.729 74.729 0 0 0 0 0.0023284 1 44649 50.897 46.182 1 5777 46 2175 2236 9036 9036 26 DQEFTVDTR 9 0 1 Unmodified _DQEFTVDTR_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.757 2 555.756735 1109.49892 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.17 1 43.17 42.67 43.67 0 0 0 0 0.0072751 1 23067 66.299 39.169 1 5778 1402 2176 2237 9037 9037 DQEFTVDTR 9 0 1 Unmodified _DQEFTVDTR_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.7614 2 555.756735 1109.49892 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.225 1 43.225 42.725 43.725 0 0 0 0 0.003088 1 23102 76.221 33.352 1 5779 1402 2176 2237 9038 9038 DQFGFINYEVGDSK 14 1 0 Unmodified _DQFGFINYEVGDSK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93;Q8WU01;Q9UG12 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620;DKFZp566C233 Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.8809 2 809.872827 1617.7311 68861.48 0.72757 0.00058924 0.32559 0.00026369 1.0532 0.00085292 809.872745975825 813.880077048918 104.92 0.77699 104.92 104.51 105.29 -7.6294E-06 292 63 8 0 0 0 0.00017456 1 64711 72.958 70.732 1 2.5095 2.4649 0 23219000 7339900 15879000 5780 42 2177 2238 9039 9039 DQFLDTLQAHGHDVNSFVR 19 0 1 Unmodified _DQFLDTLQAHGHDVNSFVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.0255 3 733.690769 2198.05048 71377.41 0.90423 0.00066343 0.28379 0.00020821 1.188 0.00087164 734.024928509598 737.361694615531 92.938 1.0539 92.938 92.459 93.513 0 484 92 8 0 0 0 5.5733E-19 3 56215 125.18 125.18 1 0.84282 0.90107 0 45001000 22004000 22997000 5781 908 2178 2239 9040;9041;9042 9041 DQFLDTLQAHGHDVNSFVR 19 0 1 Unmodified _DQFLDTLQAHGHDVNSFVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.0243 3 733.690769 2198.05048 70659.88 0.91998 0.00067498 0.5649 0.00041446 1.4849 0.0010894 734.025037502798 737.02752447951 91.709 0.88755 91.709 91.276 92.163 -7.6294E-06 412 77 7 0 0 0 2.3771E-17 2 56630 119.38 114.28 1 0.82613 0.94353 0 91068000 47899000 43168000 5782 908 2178 2239 9043;9044 9044 DQFLDTLQAHGHDVNSFVR 19 0 1 Unmodified _DQFLDTLQAHGHDVNSFVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.0273 3 733.690769 2198.05048 70039.68 0.66286 0.00048634 -0.072569 -5.3243E-05 0.59029 0.00043309 734.025157423835 737.360972288263 105.07 0.80664 105.07 104.78 105.59 0 401 51 12 0 0 0 4.9326E-05 2 59783 47.082 47.082 1 1.5154 1.3141 0 179060000 71553000 107510000 5783 908 2178 2239 9045;9046 9045 DQFLDTLQAHGHDVNSFVR 19 0 1 Unmodified _DQFLDTLQAHGHDVNSFVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.5204 4 550.519896 2198.05048 80354.68 0.47994 0.00026421 0.13646 7.5125E-05 0.6164 0.00033934 550.519875584035 553.272874843024 105.07 0.50842 105.07 104.83 105.34 -7.6294E-06 186 29 10 0 0 0 2.4596E-05 2 59857 65.25 65.25 1 1.4395 1.1893 0 11423000 4392800 7030300 5784 908 2178 2239 9047;9048 9048 DQFLDTLQAHGHDVNSFVR 19 0 1 Unmodified _DQFLDTLQAHGHDVNSFVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.0255 3 733.690769 2198.05048 70431.3 0.58767 0.00043117 -0.02456 -1.8019E-05 0.56311 0.00041315 734.025156671506 737.361037501057 104.81 0.79003 104.81 104.52 105.31 -7.6294E-06 393 47 14 0 0 0 4.1276E-06 2 58754 69.361 69.361 1 1.4843 1.2958 0 108870000 42804000 66064000 5785 908 2178 2239 9049;9050 9050 DQFLDTLQAHGHDVNSFVR 19 0 1 Unmodified _DQFLDTLQAHGHDVNSFVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.7708 4 550.519896 2198.05048 81088.95 0.4738 0.00026084 0.020153 1.1095E-05 0.49395 0.00027193 550.770763252172 553.022000399131 104.77 0.48932 104.77 104.59 105.08 -7.6294E-06 184 27 10 0 0 0 0.00085376 2 58826 38.271 38.271 1 1.483 1.2344 0 7187000 3159000 4027900 5786 908 2178 2239 9051;9052 9052 DQGTYEDYVEGLR 13 0 1 Unmodified _DQGTYEDYVEGLR_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;F8VPF3;G3V1Y7;Q6IBG5;H0YI43;F8VZU9;F8W180 F8W1R7 F8W1R7 MYL6 Myosin light polypeptide 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.8505 2 772.84681 1543.67907 69810.73 0.71118 0.00054963 0.091247 7.052E-05 0.80243 0.00062015 772.846838787938 777.851085990486 86.16 0.91815 86.16 85.711 86.63 0 443 73 8 0 0 0 5.7313E-06 3 51596 105.46 105.46 1 1.4139 1.5681 0 67078000 26927000 40151000 5787 1101 2179 2240 9053;9054;9055 9053 DQGTYEDYVEGLR 13 0 1 Unmodified _DQGTYEDYVEGLR_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;F8VPF3;G3V1Y7;Q6IBG5;H0YI43;F8VZU9;F8W180 F8W1R7 F8W1R7 MYL6 Myosin light polypeptide 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.852 2 772.84681 1543.67907 69735.77 0.68185 0.00052696 -0.049802 -3.8489E-05 0.63205 0.00048848 772.84668884648 777.850894539917 85.568 0.89473 85.568 85.039 85.934 0 415 70 8 0 0 0 6.1524E-19 2 52465 145.28 135.04 1 1.3896 1.5871 0 91034000 38454000 52580000 5788 1101 2179 2240 9056;9057 9056 DQGTYEDYVEGLR 13 0 1 Unmodified _DQGTYEDYVEGLR_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;F8VPF3;G3V1Y7;Q6IBG5;H0YI43;F8VZU9;F8W180 F8W1R7 F8W1R7 MYL6 Myosin light polypeptide 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.8516 2 772.84681 1543.67907 70163.16 0.77718 0.00060064 -0.2469 -0.00019081 0.53028 0.00040983 772.846556022618 777.850778976319 98.571 0.70322 98.571 98.136 98.839 0 286 42 9 0 0 0 0.0012305 1 55407 58.674 58.674 1 1.7778 1.4511 0 14541000 5657200 8884100 5789 1101 2179 2240 9058 9058 DQGTYEDYVEGLR 13 0 1 Unmodified _DQGTYEDYVEGLR_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;F8VPF3;G3V1Y7;Q6IBG5;H0YI43;F8VZU9;F8W180 F8W1R7 F8W1R7 MYL6 Myosin light polypeptide 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 777.8506 2 772.84681 1543.67907 70017.86 0.79809 0.0006168 -0.22298 -0.00017233 0.57511 0.00044447 772.84656620807 777.850790613276 98.675 0.64661 98.675 98.289 98.936 0 242 38 9 0 0 0 0.0003585 1 54690 62.799 62.799 1 1.7372 1.4427 0 15333000 5661100 9671700 5790 1101 2179 2240 9059 9059 DQIAQLEASLAAAK 14 1 0 Unmodified _DQIAQLEASLAAAK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5 P20700 P20700 LMNB1 Lamin-B1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.8958 2 714.888281 1427.76201 NaN NaN NaN 0.059023 4.2195E-05 NaN NaN NaN NaN 108.64 0.47074 108.64 108.34 108.81 7.6294E-06 0 0 0 0.016025 1 67686 48.004 36.839 1 NaN NaN 0 6115200 0 6115200 5791 1502 2180 2241 9060 9060 DQIAQLEASLAAAK 14 1 0 Unmodified _DQIAQLEASLAAAK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5 P20700 P20700 LMNB1 Lamin-B1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.8964 2 714.888281 1427.76201 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.96 1 119.96 119.46 120.46 0 0 0 0 0.0010077 1 70244 77.279 44.548 1 5792 1502 2180 2241 9061 9061 DQIVDLTVGNNK 12 1 0 Unmodified _DQIVDLTVGNNK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.3462 2 658.346249 1314.67794 NaN NaN NaN -0.23328 -0.00015358 NaN NaN NaN NaN 75.429 1.3091 75.429 74.833 76.142 7.6294E-06 0 0 0 3.7507E-08 1 44050 107.55 79.346 1 NaN NaN 0 392440000 392440000 0 + 5793 1165 2181 2242 9062 9062 DQIVDLTVGNNK 12 1 0 Unmodified _DQIVDLTVGNNK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.3465 2 658.346249 1314.67794 NaN NaN NaN -0.31663 -0.00020845 NaN NaN NaN NaN 85.832 2.1378 85.832 85.387 87.525 0 0 0 0 0.00085134 2 46471 84.507 55.337 1 NaN NaN 0 87078000 87078000 0 + 5794 1165 2181 2242 9063;9064 9064 DQIYDIFQK 9 1 0 Unmodified _DQIYDIFQK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3QR64;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.2958 2 585.295496 1168.57644 NaN NaN NaN 0.0076964 4.5046E-06 NaN NaN NaN NaN 96.804 0.87512 96.804 96.369 97.244 0 0 0 0 3.3014E-07 1 58784 119.41 86.797 1 NaN NaN 0 41724000 41724000 0 5795 770 2182 2243 9065 9065 DQIYDIFQK 9 1 0 Unmodified _DQIYDIFQK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3QR64;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.2964 2 585.295496 1168.57644 77754.76 0.73527 0.00043035 0.33364 0.00019528 1.0689 0.00062563 585.295585958348 589.302559281058 96.07 1.2827 96.07 95.545 96.828 0 495 109 6 0 0 0 0.0018005 2 59809 91.318 70.619 1 1.9425 2.2474 0 203960000 51387000 152570000 5796 770 2182 2243 9066;9067 9066 DQIYDIFQK 9 1 0 Unmodified _DQIYDIFQK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3QR64;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1170.062 1 1169.58372 1168.57644 57077.57 0.1213 0.00014187 0.40306 0.00047141 0.52436 0.00061328 1169.58418811811 1177.59822959283 96.109 0.75778 96.109 95.708 96.466 -7.6294E-06 189 65 6 0 0 0 0.00023899 1 59942 112.36 69.493 1 1.9207 2.1276 0 46516000 17858000 28658000 5797 770 2182 2243 9068 9068 DQIYDIFQK 9 1 0 Unmodified _DQIYDIFQK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3QR64;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.3032 2 585.295496 1168.57644 78769.43 0.6743 0.00039466 -0.060446 -3.5379E-05 0.61385 0.00035928 585.2954093657 589.302510661519 109.26 0.9134 109.26 108.85 109.76 0 243 44 8 0 0 0 0.013375 1 62882 67.494 50.129 1 1.7166 1.3871 0 22893000 8958700 13934000 5798 770 2182 2243 9069 9069 DQIYDIFQK 9 1 0 Unmodified _DQIYDIFQK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3QR64;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.3025 2 585.295496 1168.57644 79725.56 0.63175 0.00036976 0.12605 7.3777E-05 0.7578 0.00044354 585.295509235622 589.302457602283 109.29 0.90765 109.29 108.79 109.69 -7.6294E-06 195 41 8 0 0 0 0.035664 2 61825 51.066 42.203 1 1.6839 1.3524 0 15229000 5796800 9432300 5799 770 2182 2243 9070;9071 9070 DQLDSTGRPLVILPQR 16 0 2 Unmodified _DQLDSTGRPLVILPQR_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.3412 3 603.339008 1806.9952 76439 0.45839 0.00027656 -0.29175 -0.00017603 0.16664 0.00010054 603.672759364283 610.011008771819 86.494 0.43699 86.494 86.227 86.664 0 112 39 5 0 0 0 4.5194E-05 2 53310 79.652 79.652 1 0.92052 1.0284 0 26015000 12569000 13447000 5800 44 2183 2244 9072;9073 9073 DQLLLGPTYATPK 13 1 0 Unmodified _DQLLLGPTYATPK_ 0 0 0 P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.8974 2 708.890292 1415.76603 73188 0.88243 0.00062555 -0.80612 -0.00057145 0.076317 5.41E-05 708.889438991447 712.896691938819 91.076 0.93018 91.076 90.588 91.519 0 269 60 6 0 0 0 3.0063E-06 3 56385 108.9 108.9 1 1.1571 1.2623 0 40094000 13370000 26723000 5801 1615 2184 2245 9074;9075;9076 9076 DQLLLGPTYATPK 13 1 0 Unmodified _DQLLLGPTYATPK_ 0 0 0 P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.8907 2 708.890292 1415.76603 73502.01 0.50305 0.00035661 0.87111 0.00061752 1.3742 0.00097413 708.890934181959 712.898102486698 104.59 0.68435 104.59 104.27 104.96 0 183 38 7 0 0 0 0.0025619 1 58637 53.252 53.252 1 0.95019 0.76934 0 4370700 2351500 2019200 5802 1615 2184 2245 9077 9077 DQLQEQLQALK 11 1 0 Unmodified _DQLQEQLQALK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.3569 2 657.356616 1312.69868 76522.38 0.91419 0.00060095 -0.30884 -0.00020302 0.60535 0.00039793 657.356318518008 661.363500249722 82.428 0.58344 82.428 82.233 82.816 7.6294E-06 208 48 6 0 0 0 9.8957E-09 1 49344 123.86 75.066 1 0.85455 0.92948 0 48115000 23042000 25073000 5803 186;1747;718 2185 2246 9078 9078 DQLQEQLQALK 11 1 0 Unmodified _DQLQEQLQALK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.3569 2 657.356616 1312.69868 76719.23 0.71901 0.00047265 0.082416 5.4177E-05 0.80143 0.00052682 657.356525957009 661.363805870952 94.448 0.68152 94.448 94.126 94.808 0 227 41 8 0 0 0 6.833E-08 2 51950 114.51 57.703 1 1.4646 1.1758 0 14224000 5676300 8548000 5804 186;1747;718 2185 2246 9079;9080 9080 DQLQTFSEEHPVLLTEAPLNPR 22 0 1 Unmodified _DQLQTFSEEHPVLLTEAPLNPR_ 0 0 0 B4DMT4;B4DXP9;R4GMT0;B4DM97;P61163;A0A1B0GVS3 B4DMT4 B4DMT4 ACTR1A Alpha-centractin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.4345 3 845.434365 2533.28127 68091.3 0.53942 0.00045604 0.64905 0.00054873 1.1885 0.0010048 846.104198140745 849.104967438986 109.7 0.37347 109.7 109.52 109.89 0 110 29 6 0 0 0 5.7135E-05 1 68738 36.663 36.663 1 1.5565 1.5566 0 16452000 4596900 11855000 5805 1004 2186 2247 9081 9081 DQLQTFSEEHPVLLTEAPLNPR 22 0 1 Unmodified _DQLQTFSEEHPVLLTEAPLNPR_ 0 0 0 B4DMT4;B4DXP9;R4GMT0;B4DM97;P61163;A0A1B0GVS3 B4DMT4 B4DMT4 ACTR1A Alpha-centractin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.7722 3 845.434365 2533.28127 67295.27 0.88547 0.00074861 1.2182 0.0010299 2.1037 0.0017786 846.106045495567 849.104953347931 109.16 0.4399 109.16 108.9 109.34 -7.6294E-06 97 31 5 0 0 0 1.0619E-08 1 69934 71.535 65.372 1 1.3016 1.2872 0 15252000 7481200 7770900 5806 1004 2186 2247 9082 9082 DQLQTFSEEHPVLLTEAPLNPR 22 0 1 Unmodified _DQLQTFSEEHPVLLTEAPLNPR_ 0 0 0 B4DMT4;B4DXP9;R4GMT0;B4DM97;P61163;A0A1B0GVS3 B4DMT4 B4DMT4 ACTR1A Alpha-centractin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.105 3 845.434365 2533.28127 65799.6 0.58712 0.00049637 0.13607 0.00011504 0.72319 0.00061141 845.768882449175 849.105023019854 120.29 0.41196 120.29 120.07 120.48 7.6294E-06 91 18 7 0 0 0 1.8441E-07 2 71386 53.059 53.059 1 1.3389 1.1523 0 7501200 3352400 4148800 5807 1004 2186 2247 9083;9084 9084 DQLQTFSEEHPVLLTEAPLNPR 22 0 1 Unmodified _DQLQTFSEEHPVLLTEAPLNPR_ 0 0 0 B4DMT4;B4DXP9;R4GMT0;B4DM97;P61163;A0A1B0GVS3 B4DMT4 B4DMT4 ACTR1A Alpha-centractin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 849.1064 3 845.434365 2533.28127 66033.1 0.81148 0.00068605 -0.12237 -0.00010345 0.68911 0.0005826 845.433273372574 849.104923339723 120.06 0.42163 120.06 119.82 120.24 7.6294E-06 83 17 8 0 0 0 1.224E-10 2 70258 87.156 87.156 1 1.4208 1.1824 0 7246000 3189600 4056400 5808 1004 2186 2247 9085;9086 9085 DQLSVLENGVDIVVGTPGR 19 0 1 Unmodified _DQLSVLENGVDIVVGTPGR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 989.5275 2 984.523461 1967.03237 61060.98 0.75763 0.00074591 0.31452 0.00030965 1.0722 0.0010556 985.02519710859 990.02906955136 125.32 0.38783 125.32 125.14 125.52 0 109 25 8 0 0 0 1.0995E-16 1 81419 116.86 107.54 1 1.4423 1.51 0 12681000 4761200 7919900 5809 452 2187 2248 9087 9087 DQLSVLENGVDIVVGTPGR 19 0 1 Unmodified _DQLSVLENGVDIVVGTPGR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.5286 2 984.523461 1967.03237 61878.71 0.82965 0.00081681 0.17463 0.00017193 1.0043 0.00098874 985.025451473795 989.52764453096 125.03 0.52585 125.03 124.73 125.26 0 178 37 8 0 0 0 1.295E-05 1 83134 69.92 69.92 1 1.3988 1.3721 0 13986000 5571500 8414800 5810 452 2187 2248 9088 9088 DQLVYPLLAFTR 12 0 1 Unmodified _DQLVYPLLAFTR_ 0 0 0 Q5HYB3;A8K7F7;Q9Y3I1 Q5HYB3 Q5HYB3 DKFZp686B08113;FBXO7 F-box only protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.4038 2 718.400827 1434.7871 76523.12 0.56921 0.00040892 0.35713 0.00025656 0.92634 0.00066548 718.401155319929 723.404908474714 128.49 0.41429 128.49 128.31 128.73 0 95 28 5 0 0 0 0.0060504 1 83749 49.5 49.5 1 1.1109 1.1724 0 4038700 2038700 2000000 5811 771 2188 2249 9089 9089 DQLVYPLLAFTR 12 0 1 Unmodified _DQLVYPLLAFTR_ 0 0 0 Q5HYB3;A8K7F7;Q9Y3I1 Q5HYB3 Q5HYB3 DKFZp686B08113;FBXO7 F-box only protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.4061 2 718.400827 1434.7871 76884.93 1.0126 0.00072742 -0.014514 -1.0427E-05 0.99804 0.00071699 718.400743604569 723.405034352382 128.14 0.3636 128.14 127.96 128.32 0 77 22 6 0 0 0 0.005381 2 85652 51.092 48.004 1 1.3774 1.4589 0 3840000 2239400 1600500 5812 771 2188 2249 9090;9091 9091 DQMQPGGTAISVTVPYR 17 0 1 Oxidation (M) _DQM(ox)QPGGTAISVTVPYR_ DQM(1)QPGGTAISVTVPYR DQM(95.98)QPGGTAISVTVPYR 0 1 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 923.4588 2 918.45145 1834.88835 63556.96 0.67234 0.00061752 0.063355 5.8188E-05 0.7357 0.0006757 918.451984348772 923.455759318556 86.245 0.72478 86.245 85.919 86.644 0 242 57 7 0 0 0 2.1919E-07 2 51743 95.981 95.981 1 2.4536 2.4965 0 29794000 9067800 20726000 5813 1851 2189 2250 9092;9093 9093 1700 DQMQQQLNDYEQLLDVK 17 1 0 Oxidation (M) _DQM(ox)QQQLNDYEQLLDVK_ DQM(1)QQQLNDYEQLLDVK DQM(73.02)QQQLNDYEQLLDVK 0 1 0 P20700;E9PBF6;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1063.0031 2 1062.49933 2122.9841 59292.63 0.45764 0.00048625 0.21646 0.00022999 0.67411 0.00071624 1063.00195491301 1067.00800163837 109.82 0.43237 109.82 109.62 110.06 7.6294E-06 185 31 8 0 0 0 3.2293E-05 1 68746 73.022 73.022 1 1.5592 1.6777 0 40410000 15805000 24605000 5814 1502 2190 2251 9094 9094 1257 DQMQQQLNDYEQLLDVK 17 1 0 Oxidation (M) _DQM(ox)QQQLNDYEQLLDVK_ DQM(1)QQQLNDYEQLLDVK DQM(164.81)QQQLNDYEQLLDVK 0 1 0 P20700;E9PBF6;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1063.0027 2 1062.49933 2122.9841 59643.12 0.48198 0.0005121 0.20171 0.00021432 0.68369 0.00072642 1063.00138721102 1066.50679826072 109.34 0.42713 109.34 109.16 109.59 0 163 28 8 0 0 0 2.995E-45 2 70178 164.81 164.81 1 1.4776 1.6213 0 41287000 14153000 27133000 5815 1502 2190 2251 9095;9096 9096 1257 DQMQQQLNDYEQLLDVK 17 1 0 Oxidation (M) _DQM(ox)QQQLNDYEQLLDVK_ DQM(1)QQQLNDYEQLLDVK DQM(62.68)QQQLNDYEQLLDVK 0 1 0 P20700;E9PBF6;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1066.5054 2 1062.49933 2122.9841 58109.55 0.27116 0.00028811 -0.0095564 -1.0154E-05 0.2616 0.00027795 1063.00085045626 1067.00790285451 121.03 0.44508 121.03 120.75 121.19 0 105 19 8 0 0 0 3.8149E-05 1 70995 62.68 62.68 1 0.90786 0.7404 0 5773700 2838100 2935500 5816 1502 2190 2251 9097 9097 1257 DQNIFVSR 8 0 1 Unmodified _DQNIFVSR_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.7544 2 489.753798 977.493044 86847.94 0.029173 1.4288E-05 0.65174 0.00031919 0.68092 0.00033348 489.754351740558 494.758050656742 50.997 0.69918 50.997 50.657 51.356 0 216 64 6 0 0 0 0.011568 2 28155 69.628 57.906 1 0.90376 0.96637 0 45061000 23040000 22020000 5817 214 2191 2252 9098;9099 9099 DQNIFVSR 8 0 1 Unmodified _DQNIFVSR_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.7578 2 489.753798 977.493044 88224.02 0.29351 0.00014375 -0.45822 -0.00022442 -0.16471 -8.0669E-05 489.753364709784 494.757765273534 57.761 0.81181 57.761 57.34 58.152 0 255 59 6 0 0 0 0.011482 2 29287 69.825 53.622 1 1.2101 1.0353 0 5928500 2641800 3286800 5818 214 2191 2252 9100;9101 9101 DQNILLGTTYR 11 0 1 Unmodified _DQNILLGTTYR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.3442 2 647.343509 1292.67246 74982.88 0.95684 0.0006194 0.3173 0.0002054 1.2741 0.0008248 647.343460604159 652.347511285355 82.436 1.0506 82.436 82.083 83.134 0 415 88 9 0 0 0 0.00021304 2 49135 92.538 81.715 1 0.66203 0.74837 0 102850000 62396000 40458000 5819 1665 2192 2253 9102;9103 9102 DQNILLGTTYR 11 0 1 Unmodified _DQNILLGTTYR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.3433 2 647.343509 1292.67246 NaN NaN NaN 1.2452 0.00080609 NaN NaN NaN NaN 81.438 0.90899 81.438 80.99 81.899 0 0 0 0 3.9733E-08 1 49715 112.83 94.77 1 NaN NaN 0 59425000 59425000 0 5820 1665 2192 2253 9104 9104 DQNILLGTTYR 11 0 1 Unmodified _DQNILLGTTYR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 652.3478 2 647.343509 1292.67246 NaN NaN NaN -0.77243 -0.00050003 NaN NaN NaN NaN 93.559 1.0163 93.559 93.07 94.087 0 0 0 0 0.032302 1 52202 49.5 38.671 1 NaN NaN 0 3226900 0 3226900 5821 1665 2192 2253 9105 9105 DQNTVETLQR 10 0 1 Unmodified _DQNTVETLQR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.3067 2 602.301841 1202.58913 NaN NaN NaN 0.56079 0.00033777 NaN NaN NaN NaN 35.78 0.72995 35.78 35.572 36.302 0 0 0 0 0.0056566 1 15465 67.881 41.424 1 NaN NaN 0 2347400 0 2347400 5822 415 2193 2254 9106 9106 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.0013 3 658.665784 1972.97552 NaN NaN NaN -0.56712 -0.00037354 NaN NaN NaN NaN 51.167 1.8848 51.167 50.866 52.75 0 0 0 0 1.0425E-31 2 28196 102.33 68.024 1 NaN NaN 0 10499000000 10499000000 0 + 5823 1163 2194 2255 9107;9108 9107 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.5024 4 494.251157 1972.97552 NaN NaN NaN -0.51646 -0.00025526 NaN NaN NaN NaN 51.208 1.187 51.208 50.954 52.141 -3.8147E-06 0 0 0 5.7608E-32 2 28218 109.28 88.038 1 NaN NaN 0 2994900000 2994900000 0 + 5824 1163 2194 2255 9109;9110 9109 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 987.9977 2 987.495038 1972.97552 NaN NaN NaN -0.16277 -0.00016074 NaN NaN NaN NaN 51.167 0.27483 51.167 50.994 51.269 0 0 0 0 4.76E-67 1 28223 179.97 142.79 1 NaN NaN 0 493020000 493020000 0 + 5825 1163 2194 2255 9111 9111 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.6659 3 658.665784 1972.97552 NaN NaN NaN 0.12943 8.5252E-05 NaN NaN NaN NaN 52.01 1.1959 52.01 51.948 53.144 -3.8147E-06 0 0 0 1.1884E-17 1 29213 86.179 58.972 1 NaN NaN 0 131840000 131840000 0 + 5826 1163 2194 2255 9112 9112 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.251 4 494.251157 1972.97552 NaN NaN NaN 0.071782 3.5478E-05 NaN NaN NaN NaN 53.636 0.52312 53.636 53.319 53.842 -3.8147E-06 0 0 0 0.032701 1 29848 15.481 12.129 1 NaN NaN 0 13162000 13162000 0 + 5827 1163 2194 2255 9113 9113 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 987.4973 2 987.495038 1972.97552 NaN NaN NaN 0.060299 5.9545E-05 NaN NaN NaN NaN 49.634 0.42458 49.634 49.427 49.852 0 0 0 0 0.0021003 1 27835 52.265 38.838 1 NaN NaN 0 446590000 446590000 0 + 5828 1163 2194 2255 9114 9114 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.5018 4 494.251157 1972.97552 NaN NaN NaN -0.50809 -0.00025113 NaN NaN NaN NaN 49.662 1.2586 49.662 49.396 50.654 3.8147E-06 0 0 0 1.7877E-13 2 27837 78.794 67.979 1 NaN NaN 0 3714800000 3714800000 0 + 5829 1163 2194 2255 9115;9116 9115 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 987.996 2 987.495038 1972.97552 NaN NaN NaN 0.70534 0.00069652 NaN NaN NaN NaN 49.921 0.27676 49.921 49.84 50.117 0 0 0 0 2.4705E-41 1 28228 151.11 113.14 1 NaN NaN 0 140590000 140590000 0 + 5830 1163 2194 2255 9117 9117 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.2516 4 494.251157 1972.97552 NaN NaN NaN -0.0931 -4.6015E-05 NaN NaN NaN NaN 51.003 0.28842 51.003 50.839 51.127 3.8147E-06 0 0 0 0.00075319 1 28865 38.377 31.96 1 NaN NaN 0 8856800 8856800 0 + 5831 1163 2194 2255 9118 9118 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.6678 3 658.665784 1972.97552 NaN NaN NaN 0.2642 0.00017402 NaN NaN NaN NaN 53.774 0.6238 53.774 53.398 54.021 0 0 0 0 1.1664E-09 1 30708 76.768 54.293 1 NaN NaN 0 14663000 14663000 0 + 5832 1163 2194 2255 9119 9119 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.6664 3 658.665784 1972.97552 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.777 1 51.777 51.277 52.277 0 0 0 0 3.1108E-06 1 29407 85.636 59.488 1 + 5833 1163 2194 2255 9120 9120 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.0005 3 658.665784 1972.97552 NaN NaN NaN -0.58641 -0.00038625 NaN NaN NaN NaN 59.558 3.5507 59.558 59.065 62.616 3.8147E-06 0 0 0 1.0327E-05 4 30278 60.334 50.585 1 NaN NaN 0 631340000 631340000 0 + 5834 1163 2194 2255 9121;9122;9123;9124 9121 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.6669 3 658.665784 1972.97552 NaN NaN NaN -0.1511 -9.9523E-05 NaN NaN NaN NaN 60.099 2.9667 60.099 59.69 62.657 0 0 0 0 5.073E-13 3 30398 77.023 55.183 1 NaN NaN 0 619650000 619650000 0 + 5835 1163 2194 2255 9125;9126;9127 9126 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 987.9961 2 987.495038 1972.97552 NaN NaN NaN -0.15787 -0.0001559 NaN NaN NaN NaN 60.103 0.61041 60.103 59.902 60.513 0 0 0 0 0.0042285 1 30007 47.774 34.346 1 NaN NaN 0 6636000 6636000 0 + 5836 1163 2194 2255 9128 9128 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.0009 3 658.665784 1972.97552 NaN NaN NaN 0.38335 0.0002525 NaN NaN NaN NaN 64.727 0.67896 64.727 64.456 65.135 0 0 0 0 0.0017461 1 32601 32.156 22.197 1 NaN NaN 0 1700300 1700300 0 + 5837 1163 2194 2255 9129 9129 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.6664 3 658.665784 1972.97552 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.186 1 62.186 61.686 62.686 -3.8147E-06 0 0 0 4.0725E-05 1 31252 67.449 50.37 1 + 5838 1163 2194 2255 9130 9130 DQNYPGAIAIHHPNVAEKR 19 1 1 Unmodified _DQNYPGAIAIHHPNVAEKR_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.7001 3 710.699488 2129.07663 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.655 1 43.655 43.155 44.155 0 0 0 0 0.0022562 1 23371 37.672 28.388 1 + 5839 1163 2195 2256 9131 9131 DQSAVVVQGLPEGVAFK 17 1 0 Unmodified _DQSAVVVQGLPEGVAFK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;X5D7Q9;A0A0A0VEB4 X5D2J9 X5D2J9 GTF2I;GTF2I-RARA General transcription factor II-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 876.9772 2 872.467426 1742.9203 65454.49 0.7202 0.00062835 0.46578 0.00040638 1.186 0.0010347 872.467594071671 876.475727278385 119.72 0.40366 119.72 119.56 119.97 0 94 20 6 0 0 0 7.3708E-05 2 70908 66.989 66.989 1 1.2744 1.0227 0 7643900 3240500 4403400 5840 789 2196 2257 9132;9133 9133 DQSAVVVQGLPEGVAFK 17 1 0 Unmodified _DQSAVVVQGLPEGVAFK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;X5D7Q9;A0A0A0VEB4 X5D2J9 X5D2J9 GTF2I;GTF2I-RARA General transcription factor II-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 872.4686 2 872.467426 1742.9203 65419.71 0.3815 0.00033285 0.61982 0.00054078 1.0013 0.00087362 872.467798726902 876.475161868635 119.58 0.4007 119.58 119.39 119.79 -7.6294E-06 97 18 7 0 0 0 6.6809E-05 2 69917 72.891 72.891 1 1.2371 1.0064 0 7089000 3246100 3842900 5841 789 2196 2257 9134;9135 9134 DQSGVQELVK 10 1 0 Unmodified _DQSGVQELVK_ 0 0 0 Q6NXE6;B4E1N1;Q68CW5;H0YH65 Q6NXE6 Q6NXE6 ARMC6;DKFZp762A1314 Armadillo repeat-containing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.7979 2 551.790578 1101.5666 83481.78 0.688 0.00037963 0.35186 0.00019415 1.0399 0.00057378 551.79075215544 555.797905796515 51.396 0.51517 51.396 51.121 51.636 0 144 48 5 0 0 0 0.0016591 2 28406 72.643 63.73 1 0.96914 0.95255 0 20121000 8638700 11482000 5842 1848 2197 2258 9136;9137 9137 DQSLGNWR 8 0 1 Unmodified _DQSLGNWR_ 0 0 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2364 2 488.235773 974.456993 NaN NaN NaN -0.055137 -2.692E-05 NaN NaN NaN NaN 46.511 0.60427 46.511 46.192 46.796 0 0 0 0 0.033405 1 25120 57.177 39.192 1 NaN NaN 0 7433400 7433400 0 5843 1682 2198 2259 9138 9138 DQSLGNWR 8 0 1 Unmodified _DQSLGNWR_ 0 0 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.2398 2 488.235773 974.456993 86953.1 0.39816 0.0001944 0.048787 2.382E-05 0.44695 0.00021822 488.235730149138 493.239868119239 45.697 0.61721 45.697 45.275 45.892 0 155 53 4 0 0 0 0.027455 1 25025 53.891 30.034 1 1.0968 1.0819 0 14790000 7440100 7350100 5844 1682 2198 2259 9139 9139 DQTDDQVTIDSALATQK 17 1 0 Unmodified _DQTDDQVTIDSALATQK_ 0 0 0 Q13584;Q53GL5;P48735 Q13584 Q13584 IDH2 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP], mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.9513 2 924.944709 1847.87487 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.449 1 77.449 76.949 77.949 0 0 0 0 1.6677E-18 1 46855 121.24 112.73 1 5845 1578 2199 2260 9140 9140 DQTIVDPFSSK 11 1 0 Unmodified _DQTIVDPFSSK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.8091 2 618.808968 1235.60338 79489.7 0.81478 0.00050419 0.0080426 4.9768E-06 0.82282 0.00050917 618.808766166601 622.816074298596 84.805 0.53259 84.805 84.549 85.081 7.6294E-06 170 44 5 0 0 0 0.00045025 2 50890 77.533 63.404 1 0.74679 0.73586 0 19561000 9730800 9829700 5846 803 2200 2261 9141;9142 9142 DQTIVDPFSSK 11 1 0 Unmodified _DQTIVDPFSSK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8101 2 618.808968 1235.60338 78900.89 0.72221 0.00044691 0.12858 7.9564E-05 0.85078 0.00052647 618.80911676297 622.816056766712 96.139 0.6293 96.139 95.81 96.439 0 148 39 5 0 0 0 0.05005 1 53916 34.692 28.912 1 1.2537 1.0316 0 2386100 1002200 1384000 5847 803 2200 2261 9143 9143 DQTIVDPFSSK 11 1 0 Unmodified _DQTIVDPFSSK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.809 2 618.808968 1235.60338 80280 0.35367 0.00021885 0.65918 0.00040791 1.0128 0.00062676 618.808898713681 622.816745589608 96.21 0.64797 96.21 95.832 96.48 -7.6294E-06 133 41 4 0 0 0 0.06171 1 53078 33.088 22.565 1 1.158 0.90852 0 2254900 1016900 1238000 5848 803 2200 2261 9144 9144 DQTPDENDQVIVK 13 1 0 Unmodified _DQTPDENDQVIVK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.3717 2 750.86246 1499.71037 70765.95 0.82346 0.0006183 -0.13355 -0.00010028 0.68991 0.00051803 751.3631813299 754.869673674538 45.369 0.33148 45.369 45.127 45.459 0 120 29 6 0 0 0 0.00036536 3 24347 62.466 55.578 1 2.5938 2.7157 0 30140000 7919800 22220000 5849 2087 2201 2262 9145;9146;9147 9145 DQTPDENDQVIVK 13 1 0 Unmodified _DQTPDENDQVIVK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.8701 2 750.86246 1499.71037 NaN NaN NaN 2.3086 0.0017335 NaN NaN NaN NaN 45.113 0.033943 45.113 45.093 45.127 0 0 0 0 0.032774 1 24280 42.243 26.613 1 NaN NaN 0 1898500 0 1898500 5850 2087 2201 2262 9148 9148 DQTPDENDQVIVK 13 1 0 Unmodified _DQTPDENDQVIVK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.8706 2 750.86246 1499.71037 70599.55 0.83126 0.00062416 0.22107 0.00016599 1.0523 0.00079015 750.863634418888 754.869605176431 44.724 0.53761 44.724 44.358 44.895 -3.8147E-06 176 41 7 0 0 0 2.058E-13 1 24318 129.16 119.2 1 3.2772 3.6075 0 42818000 11815000 31003000 5851 2087 2201 2262 9149 9149 DQTPDENDQVIVK 13 1 0 Unmodified _DQTPDENDQVIVK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.3627 2 750.86246 1499.71037 71962.49 0.34812 0.00026139 0.13031 9.7845E-05 0.47843 0.00035923 751.363679603145 754.869631300692 53.018 0.84345 53.018 52.515 53.358 0 255 63 8 0 0 0 0.0083615 1 25610 44.024 40.17 1 1.9065 1.4905 0 3400700 1006100 2394600 5852 2087 2201 2262 9150 9150 DQTPDENDQVVVK 13 1 0 Unmodified _DQTPDENDQVVVK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.8616 2 743.854635 1485.69472 NaN NaN NaN 0.085009 6.3234E-05 NaN NaN NaN NaN 38.121 0.66155 38.121 37.707 38.369 0 0 0 0 8.2655E-14 1 19429 120.09 99.787 1 NaN NaN 0 16176000 0 16176000 5853 1364 2202 2263 9151 9151 DQTPDENDQVVVK 13 1 0 Unmodified _DQTPDENDQVVVK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.8548 2 743.854635 1485.69472 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.02 1 38.02 37.52 38.52 -3.8147E-06 0 0 0 0.0018355 1 19456 69.672 44.286 1 5854 1364 2202 2263 9152 9152 DQTPDENDQVVVK 13 1 0 Unmodified _DQTPDENDQVVVK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.862 2 743.854635 1485.69472 NaN NaN NaN 0.10558 7.8537E-05 NaN NaN NaN NaN 37.306 0.5619 37.306 36.972 37.534 0 0 0 0 1.3476E-20 1 19313 133.23 112.92 1 NaN NaN 0 30549000 0 30549000 5855 1364 2202 2263 9153 9153 DQTPDENDQVVVK 13 1 0 Unmodified _DQTPDENDQVVVK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.855 2 743.854635 1485.69472 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.282 1 37.282 36.782 37.782 0 0 0 0 4.4899E-05 1 19334 94.363 68.977 1 5856 1364 2202 2263 9154 9154 DQTPDENDQVVVK 13 1 0 Unmodified _DQTPDENDQVVVK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.856 2 743.854635 1485.69472 NaN NaN NaN 0.44214 0.00032889 NaN NaN NaN NaN 43.628 0.54416 43.628 43.359 43.903 0 0 0 0 0.046532 1 20537 40.533 33.508 1 NaN NaN 0 2032300 2032300 0 5857 1364 2202 2263 9155 9155 DQTPDENDQVVVK 13 1 0 Unmodified _DQTPDENDQVVVK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 743.8552 2 743.854635 1485.69472 70244.98 0.58213 0.00043302 -0.2731 -0.00020315 0.30903 0.00022988 743.854710518877 747.861142254629 43.891 0.6186 43.891 43.581 44.2 0 203 41 7 0 0 0 0.010895 2 20172 41.164 41.164 1 1.0469 0.81612 0 3615900 1803200 1812700 5858 1364 2202 2263 9156;9157 9157 DQTPDENEEVIVR 13 0 1 Unmodified _DQTPDENEEVIVR_ 0 0 0 F8W930;Q9Y6M1 F8W930 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.3676 2 772.365367 1542.71618 NaN NaN NaN 0.47169 0.00036432 NaN NaN NaN NaN 54.266 0.21429 54.266 54.082 54.296 0 0 0 0 0.0031456 1 30494 66.262 39.59 1 NaN NaN 0 5378500 5378500 0 5859 1267 2203 2264 9158 9158 DQVANSAFVER 11 0 1 Unmodified _DQVANSAFVER_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.3047 2 618.304384 1234.59421 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.923 1 45.923 45.423 46.423 3.8147E-06 0 0 0 4.7026E-13 1 24768 125.74 89.341 1 5860 1348 2204 2265 9159 9159 DQVANSAFVER 11 0 1 Unmodified _DQVANSAFVER_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3054 2 618.304384 1234.59421 78184.09 0.36418 0.00022518 -0.096807 -5.9856E-05 0.26738 0.00016532 618.304680202985 623.308310710386 45.039 0.61824 45.039 44.703 45.321 0 177 50 5 0 0 0 0.00039624 1 24647 81.771 54.641 1 1.7231 1.8813 0 39101000 15844000 23256000 5861 1348 2204 2265 9160 9160 DQVDIAVQELLQLK 14 1 0 Unmodified _DQVDIAVQELLQLK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.4504 2 806.451245 1610.88794 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.9 1 132.9 132.4 133.4 0 0 0 0 0.0016313 1 86892 71.085 36.706 1 5862 1454 2205 2266 9161 9161 DQVFIFLK 8 1 0 Unmodified _DQVFIFLK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.2901 2 505.289485 1008.56442 87677.17 0.53915 0.00027243 -0.26777 -0.0001353 0.27138 0.00013713 505.289406466201 509.296261680812 113.18 0.67239 113.18 112.8 113.47 0 137 49 4 0 0 0 0.014589 1 71493 62.659 43.928 1 1.0262 1.0426 0 6290100 3592300 2697800 5863 1699 2206 2267 9162 9162 DQVFIFLK 8 1 0 Unmodified _DQVFIFLK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.7912 2 505.289485 1008.56442 87523.45 0.46116 0.00023302 0.001464 7.3974E-07 0.46263 0.00023376 505.289519292905 509.296414783413 112.55 0.55632 112.55 112.27 112.83 0 119 39 4 0 0 0 0.030669 1 72733 51.787 38.799 1 0.94905 0.95936 0 8699500 4740900 3958600 5864 1699 2206 2267 9163 9163 DQVIYPDGR 9 0 1 Unmodified _DQVIYPDGR_ 0 0 0 B4DL07;P28288 B4DL07 B4DL07 ABCD3 ATP-binding cassette sub-family D member 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.7684 2 531.764363 1061.51417 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.4 1 39.4 38.9 39.9 0 0 0 0 0.0083009 1 20872 65.305 39.568 1 5865 994 2207 2268 9164 9164 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.6805 3 748.345216 2242.01382 69933.1 0.8065 0.00060354 -0.20385 -0.00015255 0.60265 0.00045099 748.679345678059 751.016447743372 67.89 1.2303 67.89 67.373 68.603 0 855 106 12 0 0 0 4.142E-18 3 39637 118.46 118.46 1 0.35004 0.41314 0 360820000 264600000 96221000 5866 1476 2208 2269 9165;9166;9167 9167 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1126.0227 2 1122.01419 2242.01382 58219.02 0.21673 0.00024317 0.11929 0.00013384 0.33602 0.00037701 1122.51573324329 1126.52321322453 67.888 0.71539 67.888 67.57 68.285 0 324 61 7 0 0 0 2.8952E-06 1 39135 81.311 81.311 1 0.34627 0.38535 0 60862000 43604000 17258000 5867 1476 2208 2269 9168 9168 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.3433 3 748.345216 2242.01382 70858.89 0.51229 0.00038337 0.2481 0.00018567 0.7604 0.00056904 748.346399794078 751.350631852625 64.81 0.46782 64.81 64.667 65.135 0 79 38 5 0 0 0 2.443E-06 2 38164 49.768 49.768 1 0.35586 0.3725 0 10513000 7568100 2944500 5868 1476 2208 2269 9169;9170 9169 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1122.5138 2 1122.01419 2242.01382 58097.48 0.017855 2.0034E-05 0.0592 6.6424E-05 0.077056 8.6458E-05 1122.51559010446 1126.52303943103 66.823 0.66283 66.823 66.588 67.251 0 344 57 8 0 0 0 6.6548E-06 2 39376 62.377 62.377 1 0.35463 0.39795 0 55250000 40928000 14322000 5869 1476 2208 2269 9171;9172 9172 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.3514 3 748.345216 2242.01382 69973.74 0.45072 0.0003373 -0.026871 -2.0109E-05 0.42385 0.00031719 748.679494789167 751.016563688554 66.858 1.1353 66.858 66.388 67.523 0 790 94 12 0 0 0 4.2761E-24 2 39572 133.21 133.21 1 0.3524 0.41483 0 429710000 318500000 111210000 5870 1476 2208 2269 9173;9174 9174 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.3509 3 748.345216 2242.01382 69383.44 0.63684 0.00047658 -0.21073 -0.0001577 0.42611 0.00031888 748.67938693798 751.350624214103 77.892 1.2838 77.892 77.334 78.618 0 603 86 13 0 0 0 2.9967E-13 2 41688 103.4 103.4 1 0.31288 0.27119 0 124860000 95272000 29591000 5871 1476 2208 2269 9175;9176 9175 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.017 3 748.345216 2242.01382 70132.89 0.58704 0.00043931 -0.1215 -9.0926E-05 0.46554 0.00034839 748.679454642092 751.35065400019 78.246 1.1453 78.246 77.735 78.881 -7.6294E-06 577 75 13 0 0 0 5.495E-18 2 41038 116.21 116.21 1 0.30685 0.2619 0 99538000 76205000 23334000 5872 1476 2208 2269 9177;9178 9178 DQVVILHHMLSK 12 1 0 Oxidation (M) _DQVVILHHM(ox)LSK_ DQVVILHHM(1)LSK DQVVILHHM(43.76)LSK 0 1 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.9339 3 479.262383 1434.76532 87624.03 0.32576 0.00015612 0.78342 0.00037546 1.1092 0.00053158 479.597485256245 481.933969994061 41.058 0.84521 41.058 40.815 41.66 0 222 71 5 0 0 0 0.0035977 1 21507 43.761 43.761 1 1.4661 1.5757 0 39842000 12841000 27001000 5873 2023;1687 2209 2270 9179 9179 1502 DQVVILHHMLSK 12 1 0 Oxidation (M) _DQVVILHHM(ox)LSK_ DQVVILHHM(1)LSK DQVVILHHM(42.43)LSK 0 1 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.9339 3 479.262383 1434.76532 88064.4 0.43648 0.00020919 0.69264 0.00033196 1.1291 0.00054114 479.263411942819 481.933968825525 39.694 0.861 39.694 39.218 40.079 0 387 74 8 0 0 0 0.0040783 1 20930 42.426 42.426 1 1.2498 1.4078 0 69073000 32635000 36438000 5874 2023;1687 2209 2270 9180 9180 1502 DQVVILHHMLSK 12 1 0 Unmodified _DQVVILHHMLSK_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 476.6022 3 473.930745 1418.7704 85465.06 0.31375 0.0001487 -0.37293 -0.00017674 -0.059178 -2.8046E-05 473.930509969682 476.602010385755 74.033 0.85139 74.033 73.621 74.473 0 295 58 8 0 0 0 0.0011295 1 39220 47.532 47.532 1 1.3623 1.0575 0 12743000 5112700 7630200 5875 2023;1687 2209 2271 9181 9181 DQVVILHHMLSK 12 1 0 Unmodified _DQVVILHHMLSK_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.3998 2 710.392479 1418.7704 NaN NaN NaN 0.099934 7.0992E-05 NaN NaN NaN NaN 74.182 0.45134 74.182 73.959 74.41 -7.6294E-06 0 0 0 0.042471 1 38510 42.976 35.33 1 NaN NaN 0 1401400 0 1401400 5876 2023;1687 2209 2271 9182 9182 DQVYPQYVIEYTEDK 15 1 0 Unmodified _DQVYPQYVIEYTEDK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.4438 2 945.443814 1888.87307 62343.71 0.68849 0.00065093 0.066878 6.3229E-05 0.75537 0.00071416 945.444229802344 949.450776366741 101.3 0.59607 101.3 100.99 101.59 7.6294E-06 218 48 6 0 0 0 0.0006361 2 63812 53.252 53.252 1 1.2839 1.2831 0 15252000 7608200 7644300 5877 1873 2210 2272 9183;9184 9184 DRDLVTEDTGVR 12 0 2 Unmodified _DRDLVTEDTGVR_ 0 0 1 Q5T0F3;Q13823;B4DPI9 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.3543 2 688.344237 1374.67392 72761.7 0.72616 0.00049984 0.022073 1.5194E-05 0.74823 0.00051504 688.344055116507 698.352451662177 36.844 0.44228 36.844 36.669 37.111 0 176 41 6 0 0 0 0.00029542 2 18682 112.43 112.43 1 1.0701 1.1635 0 48328000 24635000 23693000 5878 1721 2211 2273 9185;9186 9186 DRDLVTEDTGVR 12 0 2 Unmodified _DRDLVTEDTGVR_ 0 0 1 Q5T0F3;Q13823;B4DPI9 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.344 2 688.344237 1374.67392 73077.98 0.79789 0.00054922 -0.48111 -0.00033117 0.31678 0.00021805 688.342812660924 698.352305575332 35.881 0.53587 35.881 35.644 36.18 0 182 43 7 0 0 0 1.2526E-05 2 18350 111.63 87.541 1 1.0415 1.1878 0 41582000 22707000 18875000 5879 1721 2211 2273 9187;9188 9187 DRDRERRR 8 0 5 Unmodified _DRDRERRR_ 0 0 4 A8KAQ5;A0A024QZD5;P08621;Q9UFS1;B3KPV0 A8KAQ5 A8KAQ5 SNRP70;SNRNP70;DKFZp434N041 U1 small nuclear ribonucleoprotein 70 kDa MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 403.5576 3 386.878143 1157.6126 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.555 1 50.555 50.055 51.055 0 0 0 0 0.050857 1 27907 25.559 6.4648 1 5880 17 2212 2274 9189 9189 DRDSQITAIEK 11 1 1 Unmodified _DRDSQITAIEK_ 0 0 1 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.3417 2 638.330598 1274.64664 75845.72 0.74274 0.00047411 -0.082497 -5.2661E-05 0.66024 0.00042145 638.330693342712 647.341653057504 31.025 0.72313 31.025 30.572 31.295 0 266 65 6 0 0 0 0.0018585 2 15018 85.813 42.043 1 1.6714 1.9499 0 31209000 12040000 19169000 5881 46 2213 2275 9190;9191 9190 DRDSQITAIEK 11 1 1 Unmodified _DRDSQITAIEK_ 0 0 1 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3315 2 638.330598 1274.64664 75531.38 0.42392 0.0002706 0.020181 1.2882E-05 0.4441 0.00028348 638.330841392635 647.3417987302 30.399 0.79342 30.399 29.913 30.707 0 270 66 7 0 0 0 0.001346 2 14971 90.653 37.326 1 1.6125 1.8725 0 37941000 12322000 25619000 5882 46 2213 2275 9192;9193 9193 DRDSQITAIEK 11 1 1 Unmodified _DRDSQITAIEK_ 0 0 1 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.3424 2 638.330598 1274.64664 78515.3 0.4739 0.0003025 -0.10391 -6.6331E-05 0.36998 0.00023617 638.330693443435 647.34166867957 35.299 0.6474 35.299 35.057 35.705 0 204 57 5 0 0 0 0.013984 1 15608 61.344 23.868 1 1.5769 1.3284 0 3217000 1018000 2199000 5883 46 2213 2275 9194 9194 DREDYVPYTGEK 12 1 1 Unmodified _DREDYVPYTGEK_ 0 0 1 Q5HYL6;Q9NYL9 Q5HYL6 Q5HYL6 DKFZp686E1899;TMOD3 Tropomodulin-3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.3517 2 736.33862 1470.66269 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.701 1 40.701 40.201 41.201 0 0 0 0 0.047294 1 21330 55.261 40.289 1 5884 1808 2214 2276 9195 9195 DREEDGGGLEPAAVAR 16 0 2 Unmodified _DREEDGGGLEPAAVAR_ 0 0 1 B2R9K5;Q96EU6 B2R9K5 B2R9K5 RRP36 Ribosomal RNA processing protein 36 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.6047 3 547.932419 1640.77543 81586.69 0.21514 0.00011788 0.17711 9.7043E-05 0.39225 0.00021492 547.932337519981 554.604491868283 47.731 0.50529 47.731 47.476 47.981 0 122 32 5 0 0 0 0.0079757 1 23167 24.041 24.041 1 0.86212 0.78895 0 1689700 991620 698110 5885 867 2215 2277 9196 9196 DREIQLEISGK 11 1 1 Unmodified _DREIQLEISGK_ 0 0 1 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.3501 2 644.348791 1286.68303 75834.47 0.59797 0.0003853 0.44057 0.00028388 1.0385 0.00066918 644.348757699699 653.360528987596 60.993 0.63641 60.993 60.805 61.441 0 184 50 6 0 0 0 0.01974 1 31225 59.418 59.418 1 1.1424 0.9367 0 4866800 2099800 2767000 5886 2139 2216 2278 9197 9197 DRFTDILVR 9 0 2 Unmodified _DRFTDILVR_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.8169 2 567.81693 1133.61931 NaN NaN NaN -0.30019 -0.00017045 NaN NaN NaN NaN 79.102 0.70131 79.102 78.851 79.553 0 0 0 0 0.035101 1 46895 79.974 62.154 1 NaN NaN 0 32275000 32275000 0 5887 1379 2217 2279 9198 9198 DRFTDILVR 9 0 2 Unmodified _DRFTDILVR_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.8171 2 567.81693 1133.61931 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.54 1 77.54 77.04 78.04 0 0 0 0 0.020794 1 46925 67.726 30.705 1 5888 1379 2217 2279 9199 9199 DRIDAFLR 8 0 2 Unmodified _DRIDAFLR_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.2778 2 503.277441 1004.54033 85520.99 0.19871 0.00010001 0.14263 7.1782E-05 0.34134 0.00017179 503.277421386406 513.285638215332 64.547 1.231 64.547 64.034 65.265 0 363 107 4 0 0 0 0.043571 1 37041 80.165 31.604 1 0.98058 1.0652 0 35368000 15122000 20246000 5889 2038 2218 2280 9200 9200 DRPASGSPFQLFLSK 15 1 1 Unmodified _DRPASGSPFQLFLSK_ 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.6271 3 550.626378 1648.85731 83053.1 0.68709 0.00037833 0.42124 0.00023195 1.1083 0.00061028 550.626506457553 556.633897705794 117.73 0.39055 117.73 117.53 117.92 0 70 16 7 0 0 0 0.054354 1 69360 11.73 11.416 1 0.87405 0.79328 0 1802500 906220 896320 5890 406 2219 2281 9201 9201 DRPASGSPFQLFLSK 15 1 1 Unmodified _DRPASGSPFQLFLSK_ 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.6351 3 550.626378 1648.85731 83658.28 0.50744 0.00027941 0.026837 1.4777E-05 0.53427 0.00029419 550.626375202534 556.633917338237 117.54 0.38844 117.54 117.3 117.69 7.6294E-06 67 17 5 0 0 0 0.0059211 2 68331 30.974 24.393 1 0.84111 0.72533 0 2008100 1000700 1007400 5891 406 2219 2281 9202;9203 9203 DRPSAAHIVEALETDV 16 0 1 Unmodified _DRPSAAHIVEALETDV_ 0 0 1 V9HWH0;Q96KB5 V9HWH0 V9HWH0 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.6308 3 574.960086 1721.85843 81907.7 0.75502 0.0004341 0.0074312 4.2726E-06 0.76245 0.00043838 574.959741720617 578.296415101076 107.66 0.72249 107.66 107.26 107.98 0 131 50 5 0 0 0 0.00051278 1 68563 64.675 64.675 1 1.6224 1.6374 0 10330000 3240500 7089100 5892 1975 2220 2282 9204 9204 DRPSAAHIVEALETDV 16 0 1 Unmodified _DRPSAAHIVEALETDV_ 0 0 1 V9HWH0;Q96KB5 V9HWH0 V9HWH0 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.297 3 574.960086 1721.85843 81531.27 0.5376 0.0003091 0.1819 0.00010458 0.7195 0.00041368 575.294418671709 578.296277247784 118.22 0.33495 118.22 118.09 118.43 0 59 14 6 0 0 0 0.00065655 2 68878 46.319 46.319 1 0.98285 0.85055 0 2697700 1552000 1145700 5893 1975 2220 2282 9205;9206 9206 DRVVNLAVDK 10 1 1 Unmodified _DRVVNLAVDK_ 0 0 1 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8229 2 564.822212 1127.62987 81091.88 0.88212 0.00049824 -0.028487 -1.609E-05 0.85364 0.00048215 564.822100716481 573.833605970802 41.369 0.35223 41.369 41.267 41.619 3.8147E-06 119 30 6 0 0 0 0.0043174 1 21794 81.017 44.621 1 1.0018 1.1847 0 38814000 16457000 22358000 5894 1827 2221 2283 9207 9207 DSAAFEDNEVQDEFLEK 17 1 0 Unmodified _DSAAFEDNEVQDEFLEK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 997.9415 2 993.434174 1984.8538 NaN NaN NaN -0.035739 -3.5504E-05 NaN NaN NaN NaN 96.803 0.79722 96.803 96.447 97.244 0 0 0 0 5.6212E-13 1 58827 109.84 107.53 1 NaN NaN 0 66439000 0 66439000 5895 2103 2222 2284 9208 9208 DSAAFEDNEVQDEFLEK 17 1 0 Unmodified _DSAAFEDNEVQDEFLEK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 997.9426 2 993.434174 1984.8538 61465.45 0.45557 0.00045258 0.035081 3.4851E-05 0.49065 0.00048743 993.936284428045 997.441225077999 96.223 0.82574 96.223 95.879 96.705 7.6294E-06 287 71 8 0 0 0 4.5509E-25 1 59851 170.95 170.95 1 21.189 23.717 0 83712000 3963800 79748000 5896 2103 2222 2284 9209 9209 DSAAFEDNEVQDEFLEK 17 1 0 Unmodified _DSAAFEDNEVQDEFLEK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 997.442 2 993.434174 1984.8538 61716.67 0.36195 0.00035958 0.054051 5.3697E-05 0.416 0.00041327 993.433950373535 997.441347897331 109.58 0.67569 109.58 109.25 109.92 0 177 31 9 0 0 0 1.1865E-06 1 62982 108.17 108.17 1 31.436 25.808 0 37662000 1037400 36624000 5897 2103 2222 2284 9210 9210 DSAAFEDNEVQDEFLEK 17 1 0 Unmodified _DSAAFEDNEVQDEFLEK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 997.9409 2 993.434174 1984.8538 60670.67 0.37549 0.00037303 0.052924 5.2576E-05 0.42842 0.00042561 993.435041205949 997.441317895534 109.64 1.0803 109.64 109.34 110.42 -7.6294E-06 217 55 7 0 0 0 0.018973 1 62108 37.613 37.613 1 30.326 24.887 0 27540000 1027200 26513000 5898 2103 2222 2284 9211 9211 DSAIPVESDTDDEGAPR 17 0 1 Unmodified _DSAIPVESDTDDEGAPR_ 0 0 0 B4DKU1;B3KMN5;B3KT11;C9JA08;Q96D46 B4DKU1 B4DKU1 NMD3 60S ribosomal export protein NMD3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.3968 2 887.39231 1772.77007 NaN NaN NaN 0.1257 0.00011155 NaN NaN NaN NaN 57.1 0.3089 57.1 56.913 57.222 -3.8147E-06 0 0 0 0.00022302 1 32127 66.989 52.731 1 NaN NaN 0 2849500 0 2849500 5899 906 2223 2285 9212 9212 DSALEFLTQLSR 12 0 1 Unmodified _DSALEFLTQLSR_ 0 0 0 Q6PJG6 Q6PJG6 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.3629 2 690.361899 1378.70924 75272.63 0.9477 0.00065425 0.33411 0.00023066 1.2818 0.00088491 690.361900332585 695.366552774079 125.61 0.41039 125.61 125.38 125.79 0 91 26 5 0 0 0 0.00018756 2 81605 84.658 69.923 1 1.3365 1.4208 0 3723600 1613600 2110000 5900 1856 2224 2286 9213;9214 9214 DSALEFLTQLSR 12 0 1 Unmodified _DSALEFLTQLSR_ 0 0 0 Q6PJG6 Q6PJG6 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.8627 2 690.361899 1378.70924 NaN NaN NaN 0.19317 0.00013336 NaN NaN NaN NaN 125.16 0.24283 125.16 125.04 125.28 7.6294E-06 0 0 0 0.0032943 1 83290 66.056 47.744 1 NaN NaN 0 1439000 1439000 0 5901 1856 2224 2286 9215 9215 DSALETLQGQLEEK 14 1 0 Unmodified _DSALETLQGQLEEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.3936 2 780.891217 1559.76788 70063.13 0.72202 0.00056382 -0.25409 -0.00019842 0.46793 0.0003654 781.391983857226 784.898280267736 93.618 0.67596 93.618 93.125 93.801 0 167 57 5 0 0 0 0.00019921 2 56540 69.451 69.451 1 0.66837 0.72135 0 37167000 17243000 19924000 5902 186;1747 2225 2287 9216;9217 9216 DSALETLQGQLEEK 14 1 0 Unmodified _DSALETLQGQLEEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.3992 2 780.891217 1559.76788 NaN NaN NaN -0.2334 -0.00018226 NaN NaN NaN NaN 92.892 0.66081 92.892 92.569 93.23 0 0 0 0 4.7801E-56 1 57562 180.97 158.33 1 NaN NaN 0 21365000 0 21365000 5903 186;1747 2225 2287 9218 9218 DSALETLQGQLEEK 14 1 0 Unmodified _DSALETLQGQLEEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.8921 2 780.891217 1559.76788 NaN NaN NaN -0.34365 -0.00026836 NaN NaN NaN NaN 106.88 0.54779 106.88 106.54 107.09 7.6294E-06 0 0 0 0.021109 1 61004 44.564 34.559 1 NaN NaN 0 8270800 8270800 0 5904 186;1747 2225 2287 9219 9219 DSALETLQGQLEEK 14 1 0 Unmodified _DSALETLQGQLEEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.8997 2 780.891217 1559.76788 68478.78 0.6452 0.00050383 0.18415 0.0001438 0.82935 0.00064763 780.890882806909 784.89832916708 106.85 0.88944 106.85 106.47 107.36 0 265 56 8 0 0 0 3.2742E-09 2 60118 113.38 107.53 1 1.5205 1.223 0 22618000 9800700 12818000 5905 186;1747 2225 2287 9220;9221 9220 DSAVNAICYGAK 12 1 0 Unmodified _DSAVNAICYGAK_ 0 0 0 O60832;H7C2Q2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.8005 2 634.80062 1267.58669 75920.18 0.4048 0.00025697 0.14187 9.0059E-05 0.54667 0.00034703 634.800520396861 638.807558666585 52.381 0.78513 52.381 51.936 52.721 0 342 59 7 0 0 0 0.00032618 1 28955 72.643 53.863 1 0.75527 0.81696 0 35794000 18215000 17579000 5906 1398 2226 2288 9222 9222 DSAVNAICYGAK 12 1 0 Unmodified _DSAVNAICYGAK_ 0 0 0 O60832;H7C2Q2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.8012 2 634.80062 1267.58669 76562.96 0.56983 0.00036173 0.25826 0.00016394 0.82809 0.00052567 634.800770339437 638.807553576068 51.236 0.6272 51.236 50.928 51.555 0 191 48 6 0 0 0 2.6986E-06 1 28912 111.46 89.369 1 0.7351 0.74266 0 28594000 14258000 14336000 5907 1398 2226 2288 9223 9223 DSAVNAICYGAK 12 1 0 Unmodified _DSAVNAICYGAK_ 0 0 0 O60832;H7C2Q2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.8007 2 634.80062 1267.58669 75056.49 0.4013 0.00025474 0.087348 5.5449E-05 0.48865 0.00031019 634.800665794422 638.807917138589 60.136 0.68912 60.136 59.73 60.42 -3.8147E-06 222 46 8 0 0 0 0.00018296 2 30670 90.906 72.126 1 0.72957 0.58549 0 7642500 4272600 3369800 5908 1398 2226 2288 9224;9225 9224 DSAVNAICYGAK 12 1 0 Unmodified _DSAVNAICYGAK_ 0 0 0 O60832;H7C2Q2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.8073 2 634.80062 1267.58669 78741.63 0.50048 0.0003177 0.16842 0.00010692 0.6689 0.00042462 634.800842040433 638.807855054161 60.61 0.87445 60.61 60.299 61.173 0 258 73 7 0 0 0 0.00023447 2 30345 87.913 69.133 1 0.7642 0.62618 0 4994600 2758200 2236400 5909 1398 2226 2288 9226;9227 9227 DSAYQSITHYRPVSASR 17 0 2 Unmodified _DSAYQSITHYRPVSASR_ 0 0 1 P50402;Q5HY57 P50402 P50402 EMD Emerin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.6542 3 646.653656 1936.93914 NaN NaN NaN -0.61395 -0.00039701 NaN NaN NaN NaN 52.553 0.68956 52.553 52.248 52.938 -3.8147E-06 0 0 0 0.039159 1 29168 33.308 29.467 1 NaN NaN 0 7577600 7577600 0 5910 1590 2227 2289 9228 9228 DSAYQSITHYRPVSASR 17 0 2 Unmodified _DSAYQSITHYRPVSASR_ 0 0 1 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3265 3 646.653656 1936.93914 80676.35 0.56603 0.00036602 -0.021236 -1.3733E-05 0.54479 0.00035229 646.98840642004 653.32570078418 51.055 0.33972 51.055 50.928 51.268 3.8147E-06 90 27 5 0 0 0 0.014 1 28911 38.376 38.376 1 0.72941 0.78477 0 16310000 6489400 9820500 5911 1590 2227 2289 9229 9229 DSCNTALVLCPFK 13 1 0 Unmodified _DSCNTALVLCPFK_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;B4DUU9;F6SA91 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.8702 2 762.862894 1523.71123 NaN NaN NaN -2.7029 -0.0020619 NaN NaN NaN NaN 104.45 0.11266 104.45 104.39 104.5 0 0 0 0 0.028507 1 64501 43.512 31.876 1 NaN NaN 0 1311100 0 1311100 5912 11 2228 2290 9230 9230 DSCNTALVLCPFK 13 1 0 Unmodified _DSCNTALVLCPFK_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;B4DUU9;F6SA91 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.8701 2 762.862894 1523.71123 NaN NaN NaN -0.082149 -6.2668E-05 NaN NaN NaN NaN 103.58 0.25408 103.58 103.46 103.71 0 0 0 0 0.0039427 2 65543 63.283 53.33 1 NaN NaN 0 3299400 0 3299400 5913 11 2228 2290 9231;9232 9231 DSCNTALVLCPFK 13 1 0 Unmodified _DSCNTALVLCPFK_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;B4DUU9;F6SA91 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.8711 2 762.862894 1523.71123 69275.24 0.90306 0.00068891 -0.15841 -0.00012084 0.74465 0.00056807 763.363720377622 766.870038468503 115.69 0.41109 115.69 115.45 115.86 0 45 18 4 0 0 0 0.010561 1 66888 41.54 41.54 1 1.7597 1.3828 0 2267900 938740 1329100 5914 11 2228 2290 9233 9233 DSDEADLVLAK 11 1 0 Unmodified _DSDEADLVLAK_ 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.3004 2 588.29315 1174.57175 79117.89 0.50159 0.00029508 0.26308 0.00015477 0.76467 0.00044985 588.293230998268 592.300264924394 69.583 1.1029 69.583 69.007 70.11 0 479 96 8 0 0 0 6.1098E-10 2 40256 128.36 118.58 1 1.0723 1.2118 0 142740000 69295000 73449000 5915 662 2229 2291 9234;9235 9235 DSDEADLVLAK 11 1 0 Unmodified _DSDEADLVLAK_ 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.2935 2 588.29315 1174.57175 78635.95 0.63376 0.00037284 -0.64174 -0.00037753 -0.0079816 -4.6955E-06 588.292841023724 592.299752070124 68.498 1.2274 68.498 67.863 69.091 0 490 103 9 0 0 0 1.0397E-22 2 40602 163.32 123.25 1 1.1219 1.2753 0 144480000 70933000 73549000 5916 662 2229 2291 9236;9237 9236 DSDENLTDAEGK 12 1 0 Unmodified _DSDENLTDAEGK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.2825 2 647.275686 1292.53682 78632.35 0.64065 0.00041468 0.16659 0.00010783 0.80724 0.00052251 647.275586461272 651.282561994791 25.541 0.32287 25.541 25.372 25.695 -1.9073E-06 52 17 5 0 0 0 3.5524E-05 1 11134 99.568 98.571 1 0.5436 0.54724 0 5323400 2906200 2417200 5917 1233 2230 2292 9238 9238 DSDGSVVQFLYGEDGLDIPK 20 1 0 Unmodified _DSDGSVVQFLYGEDGLDIPK_ 0 0 0 O95602;B9ZVN9;B7ZKR9;B7Z8X7;B7Z284;Q53T12 O95602 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1081.5248 2 1077.5155 2153.01644 59974.36 0.28084 0.00030261 0.017416 1.8766E-05 0.29826 0.00032137 1078.01749727697 1082.02330012699 127.73 0.39471 127.73 127.52 127.92 -7.6294E-06 73 25 5 0 0 0 0.004018 1 83202 30.483 27.697 1 0.83433 0.84274 0 4805200 2260700 2544400 5918 1428 2231 2293 9239 9239 DSDGSVVQFLYGEDGLDIPK 20 1 0 Unmodified _DSDGSVVQFLYGEDGLDIPK_ 0 0 0 O95602;B9ZVN9;B7ZKR9;B7Z8X7;B7Z284;Q53T12 O95602 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1077.5192 2 1077.5155 2153.01644 58799.25 0.45051 0.00048543 -0.14954 -0.00016114 0.30097 0.0003243 1078.01735376237 1082.02385702935 127.47 0.37003 127.47 127.28 127.65 0 62 21 6 0 0 0 0.0055046 1 85106 27.969 27.969 1 0.82202 0.81412 0 5903000 2745800 3157100 5919 1428 2231 2293 9240 9240 DSDPFIRK 8 1 1 Unmodified _DSDPFIRK_ 0 0 1 P42695;G3V1A9;Q96FA6;E9PLE0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.2675 2 489.256174 976.497795 NaN NaN NaN 0.78636 0.00038473 NaN NaN NaN NaN 29.312 0.152 29.312 29.218 29.37 0 0 0 0 0.032327 1 14211 58.194 38.834 1 NaN NaN 0 7100600 0 7100600 5920 1565 2232 2294 9241 9241 DSDPFIRK 8 1 1 Unmodified _DSDPFIRK_ 0 0 1 P42695;G3V1A9;Q96FA6;E9PLE0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.2675 2 489.256174 976.497795 NaN NaN NaN 0.62346 0.00030503 NaN NaN NaN NaN 32.986 0.2396 32.986 32.853 33.093 0 0 0 0 0.035955 1 13938 56.011 28.486 1 NaN NaN 0 2994900 0 2994900 5921 1565 2232 2294 9242 9242 DSEDMGVVVSLGTGNR 16 0 1 Oxidation (M) _DSEDM(ox)GVVVSLGTGNR_ DSEDM(1)GVVVSLGTGNR DSEDM(40.52)GVVVSLGTGNR 0 1 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.3882 2 826.383233 1650.75191 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.003 1 73.003 72.503 73.503 0 0 0 0 0.017027 1 42824 40.516 30.828 1 5922 5 2233 2295 9243 9243 3 DSEDNPQTLLFSATCPHWVFNVAK 24 1 0 Unmodified _DSEDNPQTLLFSATCPHWVFNVAK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 929.113 3 926.106031 2775.29626 61249.18 0.82255 0.00076177 2.2834 0.0021146 3.1059 0.0028764 926.442391363573 929.113624822359 134.57 0.47282 134.57 134.33 134.8 0 69 15 9 0 0 0 3.9825E-21 1 82228 107.25 107.25 1 1.1352 0.98289 0 119030000 55342000 63688000 5923 2065 2234 2296 9244 9244 DSEEAEIIR 9 0 1 Unmodified _DSEEAEIIR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.2592 2 531.259111 1060.50367 84258.91 0.31982 0.00016991 0.18301 9.7228E-05 0.50283 0.00026714 531.259260562969 536.263204961293 46.071 0.70213 46.071 45.727 46.43 3.8147E-06 203 62 5 0 0 0 1.8622E-05 2 24849 119.41 104.63 1 0.56263 0.57034 0 28560000 16156000 12404000 5924 139 2235 2297 9245;9246 9246 DSEEAEIIRK 10 1 1 Unmodified _DSEEAEIIRK_ 0 0 1 A0A024R3T8;P09874;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.3068 2 595.306592 1188.59863 78013.63 0.79044 0.00047055 -0.33775 -0.00020106 0.45269 0.00026949 595.306382183024 604.317703886951 29.11 0.20773 29.11 29.023 29.231 0 42 11 6 0 0 0 1.4286E-11 1 14016 140.45 131.09 1 0.67115 0.80516 0 60226000 38349000 21877000 5925 139 2236 2298 9247 9247 DSEEAEIIRK 10 1 1 Unmodified _DSEEAEIIRK_ 0 0 1 A0A024R3T8;P09874;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.7991 2 595.306592 1188.59863 80043.66 0.59575 0.00035465 -0.28998 -0.00017262 0.30577 0.00018203 595.306603904192 604.317773720009 28.309 0.35958 28.309 28.13 28.489 0 79 20 7 0 0 0 0.016229 1 13548 59.908 53.012 1 0.53374 0.62435 0 51489000 30793000 20696000 5926 139 2236 2298 9248 9248 DSEEAEIIRK 10 1 1 Unmodified _DSEEAEIIRK_ 0 0 1 A0A024R3T8;P09874;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.3066 2 595.306592 1188.59863 81353.07 0.31536 0.00018773 -0.64055 -0.00038132 -0.32519 -0.00019359 595.306481184488 604.317451902867 32.962 0.31833 32.962 32.841 33.159 3.8147E-06 69 20 5 0 0 0 0.036924 2 14429 46.001 43.492 1 1.0414 0.8726 0 6746600 3192300 3554300 5927 139 2236 2298 9249;9250 9249 DSEEAEIIRK 10 1 1 Unmodified _DSEEAEIIRK_ 0 0 1 A0A024R3T8;P09874;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.308 2 595.306592 1188.59863 77859.78 0.43979 0.00026181 0.041917 2.4953E-05 0.4817 0.00028676 595.307029676882 604.317854847822 33.131 0.37163 33.131 32.961 33.332 -3.8147E-06 92 29 4 0 0 0 0.0012092 2 14017 82.287 75.696 1 1.2775 1.0805 0 3614600 1624600 1990000 5928 139 2236 2298 9251;9252 9252 DSEEFGENEEENVHSK 16 1 0 Unmodified _DSEEFGENEEENVHSK_ 0 0 0 H7BXE3;A0A024R5X3;Q9NWH9;H0YKU6;H0YL55 H7BXE3 H7BXE3 SLTM SAFB-like transcription modulator MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.8923 2 939.884849 1877.75514 63359.54 0.80846 0.00075986 -0.49326 -0.00046361 0.3152 0.00029625 939.884255473848 943.890707617661 26.974 0.24991 26.974 26.862 27.112 0 29 10 5 0 0 0 1.4234E-08 2 12332 104.59 104.59 1 1.3218 1.3336 0 7921400 2855100 5066300 5929 190 2237 2299 9253;9254 9253 DSENLASPSEYPENGER 17 0 1 Unmodified _DSENLASPSEYPENGER_ 0 0 0 P52948;A0A024RCC4;Q86TI1;B4DWF8;A8KA17 P52948 P52948 NUP98;NUP98/HOXC13 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.4099 2 947.408491 1892.80243 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.591 1 48.591 48.091 49.091 0 0 0 0 0.0034408 1 27215 53.252 38.05 1 5930 1603 2238 2300 9255 9255 DSEPLGIEEAQIGK 14 1 0 Unmodified _DSEPLGIEEAQIGK_ 0 0 0 O95602;B9ZVN9;B7ZKR9 O95602 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.877 2 743.375203 1484.73585 72069.07 0.92656 0.00068878 -0.3865 -0.00028732 0.54005 0.00040146 743.876264228303 747.381990477269 81.987 0.46828 81.987 81.776 82.244 0 112 39 5 0 0 0 0.011261 2 48956 36.417 36.417 1 0.76116 0.76878 0 6962300 4464200 2498100 5931 1428 2239 2301 9256;9257 9256 DSEPLGIEEAQIGK 14 1 0 Unmodified _DSEPLGIEEAQIGK_ 0 0 0 O95602;B9ZVN9;B7ZKR9 O95602 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.3734 2 743.375203 1484.73585 72167.96 0.77463 0.00057584 -0.29771 -0.00022131 0.47692 0.00035453 743.374411144109 747.382133614451 81.137 0.49878 81.137 80.891 81.39 0 136 43 5 0 0 0 0.0053616 1 49525 43.897 38.583 1 0.86073 0.89208 0 11288000 4882400 6405300 5932 1428 2239 2301 9258 9258 DSEPSSTVSLNGTFFK 16 1 0 Unmodified _DSEPSSTVSLNGTFFK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.9161 2 858.409774 1714.805 68748.84 0.80696 0.00069271 -0.080743 -6.9311E-05 0.72622 0.0006234 858.409462580387 862.416913945565 100.44 0.55195 100.44 100.24 100.79 0 147 44 5 0 0 0 0.010754 1 63011 33.273 25.048 1 0.71426 0.71298 0 14680000 9484400 5195300 5933 44 2240 2302 9259 9259 DSEPSSTVSLNGTFFK 16 1 0 Unmodified _DSEPSSTVSLNGTFFK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 858.4113 2 858.409774 1714.805 67066.9 0.93139 0.00079952 -0.3425 -0.00029401 0.58889 0.00050551 858.409694585317 862.416699238584 113.18 0.49471 113.18 112.93 113.43 -7.6294E-06 84 24 5 0 0 0 0.011445 2 65875 32.933 27.209 1 1.7043 1.3517 0 4435700 1874600 2561200 5934 44 2240 2302 9260;9261 9261 DSEPSSTVSLNGTFFK 16 1 0 Unmodified _DSEPSSTVSLNGTFFK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.4102 2 858.409774 1714.805 67334.66 0.60651 0.00052064 0.31687 0.00027201 0.92338 0.00079264 858.409973023473 862.417410493298 113.09 0.47984 113.09 112.87 113.35 0 100 24 6 0 0 0 0.0032483 1 64934 37.426 31.58 1 1.6775 1.3233 0 3902700 1197400 2705300 5935 44 2240 2302 9262 9262 DSETVDEDEEVDPALTVGTIK 21 1 0 Unmodified _DSETVDEDEEVDPALTVGTIK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1132.5317 2 1131.529 2261.04345 56755.03 0.30535 0.00034551 0.10242 0.0001159 0.40778 0.00046141 1132.03032422831 1136.03758605361 101.02 0.73775 101.02 100.64 101.38 0 331 54 9 0 0 0 9.2404E-07 4 61859 54.598 54.598 1 1.0233 1.1475 0 65717000 38019000 27698000 5936 1741 2241 2303 9263;9264;9265;9266 9266 DSETVDEDEEVDPALTVGTIK 21 1 0 Unmodified _DSETVDEDEEVDPALTVGTIK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1136.0388 2 1131.529 2261.04345 NaN NaN NaN 0.073084 8.2696E-05 NaN NaN NaN NaN 100.51 0.71225 100.51 100.19 100.9 0 0 0 0 7.2279E-06 2 62982 57.328 52.15 1 NaN NaN 0 28130000 0 28130000 5937 1741 2241 2303 9267;9268 9268 DSETVDEDEEVDPALTVGTIK 21 1 0 Unmodified _DSETVDEDEEVDPALTVGTIK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1136.0398 2 1131.529 2261.04345 57226.33 0.39161 0.00044311 0.28676 0.00032447 0.67836 0.00076759 1132.0313898449 1136.03772703606 113.25 0.80687 113.25 112.95 113.76 0 285 39 10 0 0 0 0.0014007 1 65811 34.277 34.277 1 1.4059 1.1575 0 40162000 17479000 22683000 5938 1741 2241 2303 9269 9269 DSETVDEDEEVDPALTVGTIK 21 1 0 Unmodified _DSETVDEDEEVDPALTVGTIK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1132.0313 2 1131.529 2261.04345 57075.43 0.19991 0.0002262 -0.074997 -8.4862E-05 0.12491 0.00014134 1132.0300004819 1136.03769884124 113.56 1.594 113.56 113.12 114.71 0 429 72 9 0 0 0 4.5075E-05 3 65597 44.44 44.44 1 1.3015 1.0651 0 12574000 5442700 7131700 5939 1741 2241 2303 9270;9271;9272 9272 DSETVDEDEEVDPALTVGTIKK 22 2 0 Unmodified _DSETVDEDEEVDPALTVGTIKK_ 0 0 1 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 797.7198 3 797.386747 2389.13841 68905.11 0.74381 0.0005931 -0.33818 -0.00026966 0.40563 0.00032344 798.05544971362 802.730260897524 95.04 0.39845 95.04 94.846 95.244 7.6294E-06 109 28 6 0 0 0 0.013876 4 53211 19.549 19.549 1 1.3845 1.202 0 3439900 1324800 2115100 5940 1741 2242 2304 9273;9274;9275;9276 9275 DSETVDEDEEVDPALTVGTIKK 22 2 0 Unmodified _DSETVDEDEEVDPALTVGTIKK_ 0 0 1 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.0649 3 797.386747 2389.13841 68835.55 0.57659 0.00045976 0.18123 0.00014451 0.75782 0.00060427 797.719429480183 802.730666398739 95.004 0.49119 95.004 94.769 95.26 0 109 33 6 0 0 0 0.0010052 1 52415 27.739 27.739 1 1.335 1.1493 0 3376900 1538500 1838400 5941 1741 2242 2304 9277 9277 DSFAQQLHQEAER 13 0 1 Unmodified _DSFAQQLHQEAER_ 0 0 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.8671 2 779.865868 1557.71718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.602 1 46.602 46.102 47.102 0 0 0 0 0.0003876 1 25764 87.001 45.601 1 5942 1327 2243 2305 9278 9278 DSFIGENSR 9 0 1 Unmodified _DSFIGENSR_ 0 0 0 B0AZS5;O00139;A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;H0Y5Z9 B0AZS5;A8K3S3 A8K3S3 KIF2A;KIF2C Kinesin-like protein;Kinesin-like protein KIF2A;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.7427 2 512.738345 1023.46214 83644.06 0.69211 0.00035487 -0.22279 -0.00011423 0.46932 0.00024064 512.73807327481 517.742034520333 35.864 0.85279 35.864 35.381 36.234 0 259 80 4 0 0 0 0.0054512 2 18030 66.692 51.311 1 0.77791 0.82353 0 41210000 21063000 20147000 5943 626;804 2244 2306 9279;9280 9279 DSFIGENSR 9 0 1 Unmodified _DSFIGENSR_ 0 0 0 B0AZS5;O00139;A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;H0Y5Z9 B0AZS5;A8K3S3 A8K3S3 KIF2A;KIF2C Kinesin-like protein;Kinesin-like protein KIF2A;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.7427 2 512.738345 1023.46214 83831.38 0.67942 0.00034836 -0.19375 -9.9343E-05 0.48567 0.00024902 512.738252424011 517.742135548497 35.039 0.72113 35.039 34.633 35.354 0 236 63 5 0 0 0 0.0032669 1 17759 72.23 49.738 1 0.81621 0.94756 0 58905000 33071000 25834000 5944 626;804 2244 2306 9281 9281 DSGDGVTHTVPIYEGYALPHAILR 24 0 1 Unmodified _DSGDGVTHTVPIYEGYALPHAILR_ 0 0 0 V9HVZ7 V9HVZ7 V9HVZ7 HEL-176 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 861.4406 3 861.10636 2580.29725 65438.95 0.54546 0.0004697 -0.18253 -0.00015717 0.36294 0.00031253 861.440774265119 864.776801497299 117.43 0.42274 117.43 117.23 117.65 -7.6294E-06 134 19 10 0 0 0 0.038997 1 69197 12.196 9.7225 1 2.5941 2.1857 0 9734500 2364200 7370300 5945 2186 2245 2307 9282 9282 DSGDGVTHTVPIYEGYALPHAILR 24 0 1 Unmodified _DSGDGVTHTVPIYEGYALPHAILR_ 0 0 0 V9HVZ7 V9HVZ7 V9HVZ7 HEL-176 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 864.7772 3 861.10636 2580.29725 66689.22 0.47483 0.00040888 -0.025399 -2.1871E-05 0.44943 0.00038701 861.106172588632 864.776869446689 117.21 0.63737 117.21 116.86 117.49 0 155 28 10 0 0 0 8.4181E-06 2 68022 38.583 38.583 1 2.6728 2.17 0 10071000 2800800 7269900 5946 2186 2245 2307 9283;9284 9283 DSGEEAAEPSAPSR 14 0 1 Unmodified _DSGEEAAEPSAPSR_ 0 0 0 Q00653;A0A1P8C958 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.8128 2 701.807684 1401.60082 NaN NaN NaN -0.055863 -3.9205E-05 NaN NaN NaN NaN 21.505 0.18465 21.505 21.382 21.567 0 0 0 0 0.0012497 1 7609 72.652 62.871 1 NaN NaN 0 1317500 0 1317500 5947 1674 2246 2308 9285 9285 DSGLVSQQLPWLFEK 15 1 0 Unmodified _DSGLVSQQLPWLFEK_ 0 0 0 A8K4P8;Q14146;Q6PCC8 A8K4P8 A8K4P8 URB2 Unhealthy ribosome biogenesis protein 2 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.9576 2 873.956694 1745.89884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.53 1 125.53 125.03 126.03 7.6294E-06 0 0 0 0.0012327 1 83635 58.172 44.014 1 5948 738 2247 2309 9286 9286 DSGNLYDSEIQNVLGVK 17 1 0 Unmodified _DSGNLYDSEIQNVLGVK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.9649 2 925.960162 1849.90577 63845.67 0.84912 0.00078625 -0.29842 -0.00027633 0.5507 0.00050993 926.460550265423 929.966808884082 116.67 0.63423 116.67 116.26 116.89 0 155 44 6 0 0 0 2.2679E-09 2 74474 108.68 108.68 1 1.0515 1.0983 0 16738000 6139400 10599000 5949 1795 2248 2310 9287;9288 9288 DSGNLYDSEIQNVLGVK 17 1 0 Unmodified _DSGNLYDSEIQNVLGVK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.4601 2 925.960162 1849.90577 64139.47 0.71401 0.00066114 0.088519 8.1965E-05 0.80253 0.00074311 926.460856080045 929.967268895012 116.23 0.65552 116.23 115.78 116.44 -7.6294E-06 167 42 7 0 0 0 7.7481E-05 2 75910 63.76 63.76 1 1.1599 1.2148 0 19434000 8930300 10504000 5950 1795 2248 2310 9289;9290 9290 DSGNLYDSEIQNVLGVK 17 1 0 Unmodified _DSGNLYDSEIQNVLGVK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 929.9694 2 925.960162 1849.90577 NaN NaN NaN -0.24321 -0.0002252 NaN NaN NaN NaN 128.35 0.71031 128.35 128.11 128.82 0 0 0 0 0.00010045 1 77445 68.809 63.203 1 NaN NaN 0 8803800 0 8803800 5951 1795 2248 2310 9291 9291 DSGNLYDSEIQNVLGVK 17 1 0 Unmodified _DSGNLYDSEIQNVLGVK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 930.4689 2 925.960162 1849.90577 NaN NaN NaN 0.15696 0.00014534 NaN NaN NaN NaN 128.18 0.58136 128.18 127.96 128.54 0 0 0 0 2.2157E-09 1 76434 101.89 95.447 1 NaN NaN 0 9525100 0 9525100 5952 1795 2248 2310 9292 9292 DSGPLSDPITGK 12 1 0 Unmodified _DSGPLSDPITGK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.8076 2 593.801143 1185.58773 79333.45 0.59715 0.00035459 -0.39555 -0.00023488 0.2016 0.00011971 593.800812436097 597.807966798762 65.442 0.73133 65.442 65.039 65.77 0 211 65 5 0 0 0 0.0010019 2 37628 62.633 56.598 1 1.2221 1.2043 0 19545000 9172800 10372000 5953 122 2249 2311 9293;9294 9293 DSGPLSDPITGK 12 1 0 Unmodified _DSGPLSDPITGK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.8086 2 593.801143 1185.58773 79480.04 0.57929 0.00034398 0.20229 0.00012012 0.78158 0.00046411 593.800765254001 597.808337404261 64.471 0.73949 64.471 64.087 64.827 0 272 68 6 0 0 0 0.0037241 1 37821 55.314 41.545 1 1.3045 1.3406 0 17892000 6917700 10975000 5954 122 2249 2311 9295 9295 DSGPLSDPITGKPYVPLLEAEEVR 24 1 1 Unmodified _DSGPLSDPITGKPYVPLLEAEEVR_ 0 0 1 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 867.4585 3 861.449793 2581.32755 66754.39 0.56461 0.00048638 0.095218 8.2026E-05 0.65983 0.00056841 861.784187916274 867.457797267557 130.2 0.44829 130.2 129.96 130.41 1.5259E-05 118 21 9 0 0 0 0.032461 1 78823 17.759 17.759 1 1.5495 1.2716 0 4930200 1642400 3287900 5955 122 2250 2312 9296 9296 DSGPLSDPITGKPYVPLLEAEEVR 24 1 1 Unmodified _DSGPLSDPITGKPYVPLLEAEEVR_ 0 0 1 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 861.7845 3 861.449793 2581.32755 66286.24 0.85016 0.00073237 0.2816 0.00024259 1.1318 0.00097496 861.784040474268 867.791823406612 130.04 0.44026 130.04 129.83 130.27 0 91 16 9 0 0 0 0.0018804 2 77849 24.397 24.397 1 1.4765 1.241 0 7176000 2610400 4565600 5956 122 2250 2312 9297;9298 9298 DSGSQEVLSELR 12 0 1 Unmodified _DSGSQEVLSELR_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.3259 2 660.325513 1318.63647 74736.32 0.47958 0.00031668 -0.013122 -8.6649E-06 0.46645 0.00030801 660.325355807581 665.329584581774 77.663 0.92358 77.663 77.187 78.111 0 372 73 8 0 0 0 1.1104E-17 3 45756 138.76 122.62 1 0.98338 1.0889 0 62521000 32673000 29848000 5957 2008 2251 2313 9299;9300;9301 9301 DSGSQEVLSELR 12 0 1 Unmodified _DSGSQEVLSELR_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.3297 2 660.325513 1318.63647 75831.16 0.40349 0.00026644 0.030676 2.0256E-05 0.43417 0.00028669 660.32539870336 665.329586403234 76.754 0.90936 76.754 76.244 77.154 7.6294E-06 282 70 6 0 0 0 1.7019E-73 2 46294 215.56 195.26 1 1.0113 1.1603 0 80731000 34714000 46017000 5958 2008 2251 2313 9302;9303 9303 DSGSQEVLSELR 12 0 1 Unmodified _DSGSQEVLSELR_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.3299 2 660.325513 1318.63647 74121.15 0.86687 0.00057242 -0.20363 -0.00013446 0.66324 0.00043796 660.325202414119 665.329459468355 88.73 0.92385 88.73 88.271 89.195 0 343 58 8 0 0 0 1.219E-12 1 48781 129.89 109.59 1 1.4692 1.1991 0 15567000 5928700 9638700 5959 2008 2251 2313 9304 9304 DSGSQEVLSELR 12 0 1 Unmodified _DSGSQEVLSELR_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.3295 2 660.325513 1318.63647 74193.14 0.39863 0.00026323 0.084958 5.61E-05 0.48359 0.00031933 660.32538885952 665.329607582003 88.909 0.8269 88.909 88.431 89.258 7.6294E-06 268 51 7 0 0 0 5.7134E-48 1 48115 192.38 172.08 1 1.4541 1.2067 0 15219000 6460500 8759000 5960 2008 2251 2313 9305 9305 DSGTMWQLK 9 1 0 Oxidation (M) _DSGTM(ox)WQLK_ DSGTM(1)WQLK DSGTM(49.42)WQLK 0 1 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.2535 2 541.252774 1080.491 83640.36 0.48265 0.00026124 -0.1216 -6.5816E-05 0.36105 0.00019542 541.252574949148 545.259936735709 51.521 0.3822 51.521 51.268 51.65 0 93 28 4 0 0 0 0.01044 1 29147 49.418 38.05 1 1.1697 1.2043 0 18081000 11102000 6979200 5961 925 2252 2314 9306 9306 759 DSGTMWQLK 9 1 0 Oxidation (M) _DSGTM(ox)WQLK_ DSGTM(1)WQLK DSGTM(55.53)WQLK 0 1 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.2609 2 541.252774 1080.491 83757.69 0.32414 0.00017544 -0.33034 -0.0001788 -0.006205 -3.3585E-06 541.252607381824 545.2596062197 51.819 0.36728 51.819 51.61 51.977 0 100 30 5 0 0 0 0.0070717 1 29360 55.531 45.544 1 1.0382 1.1243 0 22088000 7851400 14236000 5962 925 2252 2314 9307 9307 759 DSIANATVLLDYHLNYLK 18 1 0 Unmodified _DSIANATVLLDYHLNYLK_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;B4DFH8;B4DZ17 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1036.5531 2 1032.04403 2062.07351 58239.71 0.41827 0.00043167 -1.0535 -0.0010873 -0.63525 -0.00065561 1032.54417669641 1036.04997976136 118.67 0.43267 118.67 118.43 118.86 0 69 24 4 0 0 0 3.3994E-05 1 78145 63.76 59.42 1 1.2117 1.286 0 23419000 10120000 13299000 5963 1689 2253 2315 9308 9308 DSIANATVLLDYHLNYLK 18 1 0 Unmodified _DSIANATVLLDYHLNYLK_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;B4DFH8;B4DZ17 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1032.5479 2 1032.04403 2062.07351 56863.92 0.39083 0.00040336 0.63267 0.00065294 1.0235 0.0010563 1032.04254802259 1036.05269279824 131.18 0.38596 131.18 130.98 131.37 0 81 16 6 0 0 0 0.013641 1 79628 26.232 26.232 1 1.6505 1.319 0 9019600 3669800 5349800 5964 1689 2253 2315 9309 9309 DSIFEPAK 8 1 0 Unmodified _DSIFEPAK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.7386 2 453.732 905.449448 89632.56 0.0036583 1.6599E-06 -0.66303 -0.00030084 -0.65937 -0.00029918 453.731400927541 457.738846423003 51.565 0.51805 51.565 51.315 51.833 3.8147E-06 162 41 5 0 0 0 0.033654 1 29249 49.833 36.058 1 1.9902 2.0817 0 24236000 7010600 17225000 5965 5 2254 2316 9310 9310 DSIFSNLTGQLDYQGFEK 18 1 0 Unmodified _DSIFSNLTGQLDYQGFEK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1035.999 2 1031.49183 2060.9691 60466.35 0.91631 0.00094517 -0.88729 -0.00091524 0.029016 2.9929E-05 1031.49265433637 1035.99828498917 123.16 0.59542 123.16 122.91 123.5 0 237 46 9 0 0 0 5.31E-05 2 79853 57.106 57.106 1 1.3135 1.2916 0 23626000 10297000 13330000 5966 1228 2255 2317 9311;9312 9311 DSIFSNLTGQLDYQGFEK 18 1 0 Unmodified _DSIFSNLTGQLDYQGFEK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1036.0015 2 1031.49183 2060.9691 59985.95 0.7655 0.00078961 -0.45719 -0.00047159 0.30831 0.00031802 1031.9925177473 1035.99892381166 122.77 0.6509 122.77 122.49 123.14 7.6294E-06 238 50 8 0 0 0 3.4642E-08 2 81500 96.464 91.75 1 1.3712 1.4097 0 32274000 12707000 19567000 5967 1228 2255 2317 9313;9314 9313 DSIIYLTADSPNVMTTFR 18 0 1 Oxidation (M) _DSIIYLTADSPNVM(ox)TTFR_ DSIIYLTADSPNVM(1)TTFR DSIIYLTADSPNVM(57.8)TTFR 0 1 0 Q7L0Y3;C9JVB6 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1035.5063 2 1030.50388 2058.99321 NaN NaN NaN -0.60948 -0.00062807 NaN NaN NaN NaN 112.97 0.27302 112.97 112.81 113.08 0 0 0 0 0.0001792 1 71429 57.802 47.476 1 NaN NaN 0 3855100 0 3855100 5968 1871 2256 2318 9315 9315 1722 DSIIYLTADSPNVMTTFR 18 0 1 Oxidation (M) _DSIIYLTADSPNVM(ox)TTFR_ DSIIYLTADSPNVM(1)TTFR DSIIYLTADSPNVM(57.8)TTFR 0 1 0 Q7L0Y3;C9JVB6 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1035.5072 2 1030.50388 2058.99321 NaN NaN NaN -1.1533 -0.0011885 NaN NaN NaN NaN 112.49 0.34275 112.49 112.32 112.67 7.6294E-06 0 0 0 0.0001792 1 72858 57.802 43.896 1 NaN NaN 0 5219200 0 5219200 5969 1871 2256 2318 9316 9316 1722 DSITPDIATKPGQPLFLDSISPK 23 2 0 Unmodified _DSITPDIATKPGQPLFLDSISPK_ 0 0 1 Q2TB10;B7Z4V7;Q49A13 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.4468 3 814.103845 2439.28971 68719.13 0.84706 0.0006896 -0.12422 -0.00010113 0.72284 0.00058847 814.438806311501 819.781049209559 124.18 0.44348 124.18 123.92 124.37 0 103 17 9 0 0 0 9.0973E-06 1 74350 44.258 44.258 1 2.2919 1.9729 0 6164800 2092300 4072500 5970 1777 2257 2319 9317 9317 DSITPDIATKPGQPLFLDSISPK 23 2 0 Unmodified _DSITPDIATKPGQPLFLDSISPK_ 0 0 1 Q2TB10;B7Z4V7;Q49A13 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 819.7816 3 814.103845 2439.28971 68977.34 0.81143 0.00066059 0.032521 2.6475E-05 0.84395 0.00068706 814.438646103923 819.780853496639 124.03 0.48867 124.03 123.84 124.33 7.6294E-06 105 18 9 0 0 0 0.040361 1 73348 16.114 16.114 1 1.9769 1.6699 0 7323500 2032500 5291000 5971 1777 2257 2319 9318 9318 DSIVHQAGMLK 11 1 0 Oxidation (M) _DSIVHQAGM(ox)LK_ DSIVHQAGM(1)LK DSIVHQAGM(46.02)LK 0 1 0 Q9BXV5;Q53R19;O15144 Q9BXV5 Q9BXV5 ARPC2 Actin-related protein 2/3 complex subunit 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.8207 2 607.81353 1213.61251 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.673 1 34.673 34.173 35.173 0 0 0 0 0.016773 1 17389 46.022 23.282 1 5972 1375 2258 2320 9319 9319 1038 DSIVQGFQWGTR 12 0 1 Unmodified _DSIVQGFQWGTR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2;K7EP67;K7EJ74 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3507 2 697.346583 1392.67861 72541.7 0.79377 0.00055353 -0.0086063 -6.0015E-06 0.78516 0.00054753 697.346061949516 702.350415835077 98.809 0.86432 98.809 98.386 99.251 0 249 71 5 0 0 0 0.00019323 2 60406 77.379 70.491 1 0.85355 0.87293 0 18989000 9658400 9330100 5973 794 2259 2321 9320;9321 9320 DSIVQGFQWGTR 12 0 1 Unmodified _DSIVQGFQWGTR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2;K7EP67;K7EJ74 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.3516 2 697.346583 1392.67861 72823.91 0.63432 0.00044234 0.1294 9.0238E-05 0.76372 0.00053258 697.848535472014 702.35038942927 111.02 0.45541 111.02 110.83 111.28 0 73 22 4 0 0 0 0.0075566 1 63365 48.44 41.312 1 0.93045 0.81433 0 3564600 1332800 2231800 5974 794 2259 2321 9322 9322 DSLDPSFTHAMQLLTAEIEK 20 1 0 Oxidation (M) _DSLDPSFTHAM(ox)QLLTAEIEK_ DSLDPSFTHAM(1)QLLTAEIEK DSLDPSFTHAM(53.19)QLLTAEIEK 0 1 0 B4DDX2;Q07666;B4E043;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.3766 3 754.703464 2261.08856 69930.54 0.71006 0.00053589 -0.59834 -0.00045157 0.11172 8.4316E-05 755.036644215456 757.709168808872 116.24 0.65372 116.24 115.89 116.54 0 205 41 8 0 0 0 1.6731E-06 1 74121 53.188 53.188 1 1.1901 1.2354 0 16990000 7121300 9869000 5975 962 2260 2322 9323 9323 774 DSLDPSFTHAMQLLTAEIEK 20 1 0 Oxidation (M) _DSLDPSFTHAM(ox)QLLTAEIEK_ DSLDPSFTHAM(1)QLLTAEIEK DSLDPSFTHAM(109.03)QLLTAEIEK 0 1 0 B4DDX2;Q07666;B4E043;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.3752 3 754.703464 2261.08856 71104.77 0.87292 0.0006588 -0.34011 -0.00025668 0.53281 0.00040211 755.037889132435 757.708805782504 116.97 0.44724 116.97 116.75 117.2 0 181 32 8 0 0 0 9.7244E-14 1 74781 109.03 109.03 1 2.1729 2.1908 0 18441000 4190900 14251000 5976 962 2260 2322 9324 9324 774 DSLDPSFTHAMQLLTAEIEK 20 1 0 Oxidation (M) _DSLDPSFTHAM(ox)QLLTAEIEK_ DSLDPSFTHAM(1)QLLTAEIEK DSLDPSFTHAM(65.16)QLLTAEIEK 0 1 0 B4DDX2;Q07666;B4E043;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.3758 3 754.703464 2261.08856 69459.44 0.88485 0.0006678 -0.66811 -0.00050423 0.21674 0.00016357 755.036661281877 757.708800622547 115.71 0.73206 115.71 115.21 115.94 -7.6294E-06 191 47 7 0 0 0 6.827E-07 1 75494 65.16 65.16 1 1.3228 1.3791 0 24430000 9948600 14481000 5977 962 2260 2322 9325 9325 774 DSLDPSFTHAMQLLTAEIEK 20 1 0 Oxidation (M) _DSLDPSFTHAM(ox)QLLTAEIEK_ DSLDPSFTHAM(1)QLLTAEIEK DSLDPSFTHAM(95.67)QLLTAEIEK 0 1 0 B4DDX2;Q07666;B4E043;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.3758 3 754.703464 2261.08856 69840.64 0.70867 0.00053484 -0.0080666 -6.0879E-06 0.70061 0.00052875 755.037980980241 757.709058189996 116.49 0.43333 116.49 116.24 116.67 0 147 27 7 0 0 0 8.6268E-10 1 76157 95.666 95.666 1 2.6472 2.6689 0 28080000 4870900 23209000 5978 962 2260 2322 9326 9326 774 DSLGAYSETHSDDVTQVR 18 0 1 Unmodified _DSLGAYSETHSDDVTQVR_ 0 0 0 A0A024R667;Q96FK6;G3V4B8 A0A024R667 A0A024R667 C14orf150;WDR89 WD repeat-containing protein 89 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.9701 3 660.636219 1978.88683 74768.77 0.36847 0.00024342 -0.14545 -9.609E-05 0.22302 0.00014733 660.970489515216 663.972523110819 52.28 0.51908 52.28 52.01 52.529 -3.8147E-06 149 38 6 0 0 0 0.0037322 1 28994 27.523 23.682 1 0.69102 0.70656 0 14582000 7956800 6624800 5979 198 2261 2323 9327 9327 DSLGAYSETHSDDVTQVR 18 0 1 Unmodified _DSLGAYSETHSDDVTQVR_ 0 0 0 A0A024R667;Q96FK6;G3V4B8 A0A024R667 A0A024R667 C14orf150;WDR89 WD repeat-containing protein 89 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.6379 3 660.636219 1978.88683 NaN NaN NaN 0.46608 0.00030791 NaN NaN NaN NaN 51.208 0.34326 51.208 51.055 51.399 0 0 0 0 0.0028831 1 29066 47.68 37.045 1 NaN NaN 0 5725700 5725700 0 5980 198 2261 2323 9328 9328 DSLIFLVDASK 11 1 0 Unmodified _DSLIFLVDASK_ 0 0 0 A0A024R1N4;P12956;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.3333 2 604.332079 1206.6496 77472.48 0.72459 0.0004379 0.053634 3.2413E-05 0.77823 0.00047031 604.332045901115 608.339157529575 114.72 1.0889 114.72 114.29 115.38 0 425 73 8 0 0 0 5.8219E-05 2 72657 98.943 79.672 1 0.40828 0.46176 0 147430000 105720000 41705000 5981 82 2262 2324 9329;9330 9329 DSLIFLVDASK 11 1 0 Unmodified _DSLIFLVDASK_ 0 0 0 A0A024R1N4;P12956;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.8413 2 604.332079 1206.6496 77624.52 0.71153 0.00043 0.089812 5.4277E-05 0.80134 0.00048427 604.332077299498 608.339138897486 114.18 1.3524 114.18 113.73 115.08 0 497 92 10 0 0 0 0.00085012 2 74027 72.006 53.226 1 0.40516 0.46743 0 188050000 132360000 55685000 5982 82 2262 2324 9331;9332 9332 DSLIFLVDASK 11 1 0 Unmodified _DSLIFLVDASK_ 0 0 0 A0A024R1N4;P12956;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.3318 2 604.332079 1206.6496 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.52 1 122.52 122.02 123.02 -7.6294E-06 0 0 0 0.018015 1 81279 54.416 34.63 1 5983 82 2262 2324 9333 9333 DSLIFLVDASK 11 1 0 Unmodified _DSLIFLVDASK_ 0 0 0 A0A024R1N4;P12956;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 604.3331 2 604.332079 1206.6496 78413.77 0.83768 0.00050624 0.24006 0.00014508 1.0777 0.00065131 604.332240022902 608.339101787181 125.79 1.285 125.79 125.35 126.63 -7.6294E-06 301 50 9 0 0 0 2.1791E-05 2 75504 104.22 84.95 1 0.29338 0.24074 0 37277000 29060000 8217000 5984 82 2262 2324 9334;9335 9335 DSLIFLVDASK 11 1 0 Unmodified _DSLIFLVDASK_ 0 0 0 A0A024R1N4;P12956;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.3328 2 604.332079 1206.6496 78332.27 0.71297 0.00043087 0.22231 0.00013435 0.93528 0.00056522 604.332201153884 608.339092813645 125.65 1.2145 125.65 125.23 126.44 0 290 54 9 0 0 0 0.00036959 2 74487 83.862 64.591 1 0.3011 0.24899 0 32555000 25357000 7198300 5985 82 2262 2324 9336;9337 9337 DSLIIIDELGR 11 0 1 Unmodified _DSLIIIDELGR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;B4DL39;B4DSB9;B4DN49 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.3488 2 622.34826 1242.68197 78896.84 1.0036 0.0006246 -0.12281 -7.6428E-05 0.88081 0.00054817 622.348029620479 627.352320592635 117.16 0.56147 117.16 116.9 117.47 7.6294E-06 173 40 6 0 0 0 0.0019892 1 74836 63.283 63.283 1 0.97116 1.0174 0 12487000 7891900 4595200 5986 1237 2263 2325 9338 9338 DSLIIIDELGR 11 0 1 Unmodified _DSLIIIDELGR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;B4DL39;B4DSB9;B4DN49 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.3482 2 622.34826 1242.68197 77503.39 0.52631 0.00032755 0.37397 0.00023274 0.90028 0.00056029 622.348489919846 627.352570199864 116.7 0.50827 116.7 116.45 116.96 0 124 31 5 0 0 0 0.00043595 1 76387 78.655 78.655 1 1.0412 1.025 0 14501000 7044200 7456900 5987 1237 2263 2325 9339 9339 DSLTLVFVETK 11 1 0 Unmodified _DSLTLVFVETK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.3524 2 626.345186 1250.67582 79729.31 0.91244 0.0005715 0.10131 6.3456E-05 1.0137 0.00063496 626.345086281996 630.352347380743 111.43 0.5799 111.43 111.06 111.64 0 129 41 5 0 0 0 0.00013603 2 70020 95.573 95.573 1 2.0004 2.0852 0 11695000 5103900 6590700 5988 522 2264 2326 9340;9341 9341 DSLTLVFVETK 11 1 0 Unmodified _DSLTLVFVETK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.3528 2 626.345186 1250.67582 78456.05 0.63798 0.00039959 -0.020224 -1.2667E-05 0.61775 0.00038693 626.345522844886 630.352201309833 110.85 0.83887 110.85 110.47 111.3 -7.6294E-06 132 62 4 0 0 0 7.8874E-05 1 71358 98.048 98.048 1 1.0858 1.0844 0 6575100 3209100 3366000 5989 522 2264 2326 9342 9342 DSLTLVFVETK 11 1 0 Unmodified _DSLTLVFVETK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.3458 2 626.345186 1250.67582 76599.66 0.7943 0.00049751 -0.018252 -1.1432E-05 0.77605 0.00048607 626.34506555747 630.352334185912 122.05 0.52995 122.05 121.88 122.4 0 76 25 5 0 0 0 0.0022273 1 72862 62.005 55.7 1 1.3646 1.0816 0 4217700 1600600 2617100 5990 522 2264 2326 9343 9343 DSLVDIIGICK 11 1 0 Unmodified _DSLVDIIGICK_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3337 2 616.831388 1231.64822 79273.65 0.98315 0.00060643 -0.4269 -0.00026333 0.55624 0.00034311 616.831199628577 620.838263720467 115.71 0.57862 115.71 115.49 116.06 0 151 37 5 0 0 0 0.00059163 2 73639 73.985 56.563 1 0.65517 0.64488 0 9094900 5578200 3516700 5991 1525 2265 2327 9344;9345 9344 DSLVDIIGICK 11 1 0 Unmodified _DSLVDIIGICK_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8318 2 616.831388 1231.64822 77771.27 0.50013 0.0003085 0.12162 7.5016E-05 0.62175 0.00038351 616.831476191091 621.340349683907 115.27 0.55054 115.27 114.95 115.5 0 133 36 5 0 0 0 0.00040918 2 75044 80.755 58.015 1 0.68776 0.70942 0 11510000 6995900 4514400 5992 1525 2265 2327 9346;9347 9346 DSLVDIIGICK 11 1 0 Unmodified _DSLVDIIGICK_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.8327 2 616.831388 1231.64822 77989.68 0.51662 0.00031867 0.36982 0.00022811 0.88644 0.00054678 616.831578946505 620.838816908763 126.96 0.53664 126.96 126.68 127.22 0 89 22 5 0 0 0 0.0057959 1 76364 55.567 44.416 1 0.30012 0.25063 0 2228900 1517800 711070 5993 1525 2265 2327 9348 9348 DSLVDIIGICK 11 1 0 Unmodified _DSLVDIIGICK_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.8312 2 616.831388 1231.64822 78625.81 0.50349 0.00031057 0.36165 0.00022308 0.86515 0.00053365 616.831482067578 620.838841046468 126.8 0.50671 126.8 126.55 127.05 0 91 21 6 0 0 0 0.0058544 2 75371 55.461 45.137 1 0.29648 0.2391 0 2535000 1751600 783360 5994 1525 2265 2327 9349;9350 9349 DSLVLNNITR 10 0 1 Unmodified _DSLVLNNITR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.8239 2 572.81967 1143.62479 79717.11 0.60974 0.00034927 0.158 9.0503E-05 0.76774 0.00043978 572.819611481818 577.824077783382 78.874 1.3428 78.874 78.283 79.626 0 358 120 6 0 0 0 0.0038686 2 46464 62.558 43.454 1 1.0174 1.1311 0 74593000 28071000 46522000 5995 1618 2266 2328 9351;9352 9352 DSLVLNNITR 10 0 1 Unmodified _DSLVLNNITR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.8195 2 572.81967 1143.62479 79934.52 0.77229 0.00044238 0.28837 0.00016519 1.0607 0.00060757 572.819515395048 577.824175331081 77.71 0.74487 77.71 77.335 78.08 0 319 62 8 0 0 0 0.0022851 2 46918 80.231 62.323 1 1.3689 1.5595 0 104730000 41729000 63001000 5996 1618 2266 2328 9353;9354 9354 DSLVLNNITR 10 0 1 Unmodified _DSLVLNNITR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.8249 2 572.81967 1143.62479 79791.44 0.56686 0.00032471 0.28047 0.00016066 0.84733 0.00048537 572.819629737781 577.82420425703 89.468 1.1867 89.468 88.736 89.923 7.6294E-06 320 77 7 0 0 0 0.014443 1 49284 49.06 26.32 1 1.7498 1.4335 0 16594000 6053500 10540000 5997 1618 2266 2328 9355 9355 DSLVQSCPGSLSLCAGVK 18 1 0 Unmodified _DSLVQSCPGSLSLCAGVK_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 939.4598 2 939.458418 1876.90228 NaN NaN NaN -0.77262 -0.00072585 NaN NaN NaN NaN 93.41 0.23027 93.41 93.341 93.571 -7.6294E-06 0 0 0 0.0060206 1 56682 43.991 19.137 1 NaN NaN 0 5290700 5290700 0 5998 619 2267 2329 9356 9356 DSLVQSCPGSLSLCAGVK 18 1 0 Unmodified _DSLVQSCPGSLSLCAGVK_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 939.4575 2 939.458418 1876.90228 NaN NaN NaN -0.33548 -0.00031517 NaN NaN NaN NaN 92.88 0.11109 92.88 92.786 92.897 0 0 0 0 0.00042556 1 57569 60.448 33.775 1 NaN NaN 0 4473500 4473500 0 5999 619 2267 2329 9357 9357 DSLYKPILR 9 1 1 Unmodified _DSLYKPILR_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.8255 2 552.824224 1103.63389 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.456 1 58.456 57.956 58.956 0 0 0 0 0.036507 1 33996 63.48 36.878 1 6000 1742 2268 2330 9358 9358 DSLYKPILR 9 1 1 Unmodified _DSLYKPILR_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.8356 2 552.824224 1103.63389 80653.38 0.35268 0.00019497 0.19482 0.0001077 0.54749 0.00030267 552.82432155091 561.835453797434 69.245 0.42424 69.245 69.01 69.434 0 125 26 7 0 0 0 0.024061 1 36287 69.198 59.61 1 1.3817 1.1908 0 12277000 5221200 7055900 6001 1742 2268 2330 9359 9359 DSLYKPILR 9 1 1 Unmodified _DSLYKPILR_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.8358 2 552.824224 1103.63389 80889.47 0.56069 0.00030996 -0.076315 -4.2189E-05 0.48437 0.00026777 552.824126841449 561.83532789996 69.611 0.46566 69.611 69.385 69.851 0 168 31 8 0 0 0 0.0086405 1 35706 83.265 67.062 1 1.3292 1.1253 0 12953000 5000600 7952100 6002 1742 2268 2330 9360 9360 DSNELSDSAGEEDSADLK 18 1 0 Unmodified _DSNELSDSAGEEDSADLK_ 0 0 0 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.4023 2 941.395246 1880.77594 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.116 1 49.116 48.616 49.616 0 0 0 0 0.0058441 1 27598 48.527 45.205 1 6003 2154 2269 2331 9361 9361 DSNNLCLHFNPR 12 0 1 Unmodified _DSNNLCLHFNPR_ 0 0 0 P09382 P09382 P09382 LGALS1 Galectin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.5702 3 496.233375 1485.6783 86351.6 0.08341 4.1391E-05 -0.47223 -0.00023434 -0.38882 -0.00019295 496.233466000411 499.569549089511 64.546 0.76802 64.546 64.308 65.076 0 261 68 6 0 0 0 4.5777E-06 1 37184 89.548 78.443 1 6.1988 6.4295 0 22698000 2603000 20095000 6004 1460 2270 2332 9362 9362 DSNNLCLHFNPR 12 0 1 Unmodified _DSNNLCLHFNPR_ 0 0 0 P09382 P09382 P09382 LGALS1 Galectin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.5698 3 496.233375 1485.6783 87484.52 0.35928 0.00017829 -0.41019 -0.00020355 -0.050913 -2.5265E-05 496.233304351419 499.569472787181 74.088 0.66066 74.088 73.827 74.488 -7.6294E-06 184 43 7 0 0 0 0.0099994 1 39213 35.677 35.112 1 2.7155 2.3408 0 2656000 759220 1896800 6005 1460 2270 2332 9363 9363 DSNNLCLHFNPR 12 0 1 Unmodified _DSNNLCLHFNPR_ 0 0 0 P09382 P09382 P09382 LGALS1 Galectin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 499.9039 3 496.233375 1485.6783 88439.1 0.051146 2.538E-05 0.11763 5.8374E-05 0.16878 8.3754E-05 496.233449931869 499.569552630164 74.378 0.52764 74.378 74.182 74.71 0 134 33 6 0 0 0 0.025354 1 38628 37.144 32.753 1 3.0812 2.7857 0 2129000 621700 1507300 6006 1460 2270 2332 9364 9364 DSNPDEIEIDFETLKPTTLR 20 1 1 Unmodified _DSNPDEIEIDFETLKPTTLR_ 0 0 1 A0A024R8H6;Q15059;B4DS09 A0A024R8H6 A0A024R8H6 BRD3 Bromodomain-containing protein 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.3792 3 778.388422 2332.14344 78380.4 0.3956 0.00030793 0.15453 0.00012028 0.55012 0.00042821 778.72260142698 784.395828836111 113.59 0.30074 113.59 113.46 113.76 0 51 20 4 0 0 0 0.027203 1 73729 24.893 20.707 1 0.45411 0.50147 0 6867700 5011100 1856600 6007 249 2271 2333 9365 9365 DSNPEEIEIDFETLKPSTLR 20 1 1 Unmodified _DSNPEEIEIDFETLKPSTLR_ 0 0 1 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1176.5898 2 1167.07899 2332.14344 56068.29 0.12835 0.0001498 -0.63225 -0.00073789 -0.5039 -0.00058809 1167.58067202263 1176.59108642082 124.44 0.41053 124.44 124.21 124.62 0 66 16 6 0 0 0 0.022778 1 74511 30.133 25.585 1 1.1342 0.93661 0 4100600 1942100 2158500 6008 367 2272 2334 9366 9366 DSNPEEIEIDFETLKPSTLR 20 1 1 Unmodified _DSNPEEIEIDFETLKPSTLR_ 0 0 1 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.7295 3 778.388422 2332.14344 67400.02 0.84435 0.00065723 -0.24466 -0.00019044 0.59969 0.00046679 778.72230817426 784.73033133289 124.42 0.49561 124.42 124.16 124.66 -7.6294E-06 105 20 8 0 0 0 0.034441 1 74537 11.057 8.0039 1 0.97712 0.80012 0 4770800 2303400 2467400 6009 367 2272 2334 9367 9367 DSNPEEIEIDFETLKPSTLR 20 1 1 Unmodified _DSNPEEIEIDFETLKPSTLR_ 0 0 1 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1176.5884 2 1167.07899 2332.14344 55883.07 0.27581 0.00032189 -0.69924 -0.00081607 -0.42343 -0.00049418 1167.57921378097 1176.59061438619 124.31 0.33834 124.31 124.12 124.46 -7.6294E-06 61 13 6 0 0 0 0.021472 1 73520 30.543 27.98 1 1.0665 0.89477 0 5103600 2405900 2697700 6010 367 2272 2334 9368 9368 DSNPEEIEIDFETLKPSTLR 20 1 1 Unmodified _DSNPEEIEIDFETLKPSTLR_ 0 0 1 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 778.7228 3 778.388422 2332.14344 69860.11 0.7604 0.00059189 0.38899 0.00030279 1.1494 0.00089468 778.722557000509 784.396679365015 124.33 0.43466 124.33 124.03 124.46 0 88 17 8 0 0 0 0.0033702 1 73553 23.172 20.119 1 0.91249 0.76901 0 4001300 1838500 2162700 6011 367 2272 2334 9369 9369 DSPAFPDSPWR 11 0 1 Unmodified _DSPAFPDSPWR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.7932 2 637.793652 1273.57275 80189.65 0.69997 0.00044644 0.19391 0.00012368 0.89389 0.00057012 637.793580935651 642.797953219379 88.97 0.89175 88.97 88.406 89.298 0 210 69 6 0 0 0 0.0012067 1 53400 69.275 64.117 1 1.0957 1.1389 0 22211000 12409000 9801500 6012 2059 2273 2335 9370 9370 DSPAFPDSPWR 11 0 1 Unmodified _DSPAFPDSPWR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.7944 2 637.793652 1273.57275 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.393 1 88.393 87.893 88.893 7.6294E-06 0 0 0 0.00079231 1 54519 70.908 56.906 1 6013 2059 2273 2335 9371 9371 DSPAFPDSPWR 11 0 1 Unmodified _DSPAFPDSPWR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.794 2 637.793652 1273.57275 77601.66 0.39567 0.00025236 0.72456 0.00046212 1.1202 0.00071447 637.793742696454 642.798448546376 100.82 0.93363 100.82 100.43 101.36 7.6294E-06 322 66 6 0 0 0 0.055369 1 56887 33.961 28.595 1 2.0244 1.6539 0 14113000 4403400 9709100 6014 2059 2273 2335 9372 9372 DSPAFPDSPWR 11 0 1 Unmodified _DSPAFPDSPWR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.7935 2 637.793652 1273.57275 75836.69 0.5051 0.00032215 0.70954 0.00045254 1.2146 0.00077469 637.793708915126 642.798318613756 100.81 0.95694 100.81 100.44 101.4 0 365 65 8 0 0 0 0.049844 1 56017 34.721 29.562 1 2.0154 1.6271 0 11375000 3446600 7928600 6015 2059 2273 2335 9373 9373 DSPFGLSFVR 10 0 1 Unmodified _DSPFGLSFVR_ 0 0 0 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;P18887;B2RCY5;B4DEB2;M0QZ96;M0R0D2;M0R1U8;M0QYS5 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.7908 2 562.790381 1123.56621 82038.99 0.65831 0.00037049 -0.24386 -0.00013724 0.41446 0.00023325 562.790158972102 567.794492761026 110.2 0.6125 110.2 109.94 110.55 -7.6294E-06 146 39 6 0 0 0 0.009241 2 70789 54.982 28.38 1 0.57476 0.56973 0 15737000 10662000 5075000 6016 58 2274 2336 9374;9375 9374 DSPFGLSFVR 10 0 1 Unmodified _DSPFGLSFVR_ 0 0 0 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;P18887;B2RCY5;B4DEB2;M0QZ96;M0R0D2;M0R1U8;M0QYS5 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.7916 2 562.790381 1123.56621 85341.24 0.82314 0.00046325 -0.17027 -9.5829E-05 0.65286 0.00036742 562.790253866441 567.794383463181 121.61 0.40491 121.61 121.4 121.81 0 76 20 5 0 0 0 0.021656 1 72346 46.158 23.139 1 0.50203 0.42248 0 3075000 1951200 1123800 6017 58 2274 2336 9376 9376 DSPFGLSFVR 10 0 1 Unmodified _DSPFGLSFVR_ 0 0 0 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;P18887;B2RCY5;B4DEB2;M0QZ96;M0R0D2;M0R1U8;M0QYS5 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.7894 2 562.790381 1123.56621 84895.32 0.77569 0.00043655 -0.25643 -0.00014432 0.51926 0.00029224 562.790088626401 567.794355733879 121.41 0.39561 121.41 121.21 121.61 -7.6294E-06 81 21 5 0 0 0 0.049193 1 71285 36.334 25.265 1 0.56766 0.4889 0 2763500 1541700 1221800 6018 58 2274 2336 9377 9377 DSPSVWAAVPGK 12 1 0 Unmodified _DSPSVWAAVPGK_ 0 0 0 P07737;CON__P02584;I3L3D5 P07737 P07737 PFN1 Profilin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3219 2 607.31422 1212.61389 NaN NaN NaN 0.4881 0.00029643 NaN NaN NaN NaN 79.217 0.48402 79.217 78.952 79.436 0 0 0 0 0.0048177 1 48001 63.283 51.236 1 NaN NaN 0 8976300 0 8976300 6019 1453 2275 2337 9378 9378 DSPTQEREELFIQK 14 1 1 Unmodified _DSPTQEREELFIQK_ 0 0 1 B4DSD7;E9PFR3;A8K6Y2;A0A024RD11;Q14738;Q59EF0;H0Y8C4 B4DSD7 B4DSD7 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.4423 2 860.431041 1718.84753 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.257 1 57.257 56.757 57.757 0 0 0 0 0.033029 1 33116 52.247 11.75 1 6020 375 2276 2338 9379 9379 DSQDAGGFGPEDR 13 0 1 Unmodified _DSQDAGGFGPEDR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.7863 2 675.78147 1349.54839 74659.86 0.94901 0.00064132 0.023437 1.5838E-05 0.97245 0.00065716 675.781575846372 680.785537668966 32.107 0.61655 32.107 31.771 32.388 0 242 58 6 0 0 0 0.010847 1 15733 41.218 25.957 1 1.3829 1.3811 0 16599000 7620000 8978800 6021 1754 2277 2339 9380 9380 DSQDAGGFGPEDR 13 0 1 Unmodified _DSQDAGGFGPEDR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.7871 2 675.78147 1349.54839 74705.57 0.5926 0.00040047 -0.12465 -8.4234E-05 0.46796 0.00031624 675.781356152105 680.785498277288 31.345 0.52223 31.345 31.134 31.656 1.9073E-06 187 46 6 0 0 0 0.00015089 2 15374 72.887 54.447 1 1.4239 1.5559 0 30273000 12451000 17822000 6022 1754 2277 2339 9381;9382 9381 DSQDAGGFGPEDR 13 0 1 Unmodified _DSQDAGGFGPEDR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.7858 2 675.78147 1349.54839 NaN NaN NaN 0.32276 0.00021811 NaN NaN NaN NaN 36.066 0.63585 36.066 35.852 36.488 0 0 0 0 0.00020221 1 16237 89.356 70.085 1 NaN NaN 0 1315300 0 1315300 6023 1754 2277 2339 9383 9383 DSSLVNEQSQITR 13 0 1 Unmodified _DSSLVNEQSQITR_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.8735 2 738.868076 1475.7216 NaN NaN NaN 0.19081 0.00014098 NaN NaN NaN NaN 51.153 0.58664 51.153 50.76 51.346 0 0 0 0 0.0037234 1 28103 64.103 54.688 1 NaN NaN 0 8856600 0 8856600 6024 247 2278 2340 9384 9384 DSSLVNEQSQITR 13 0 1 Unmodified _DSSLVNEQSQITR_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.8678 2 738.868076 1475.7216 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.834 1 50.834 50.334 51.334 0 0 0 0 0.00020949 1 28091 90.827 73.354 1 6025 247 2278 2340 9385 9385 DSSLVNEQSQITR 13 0 1 Unmodified _DSSLVNEQSQITR_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.8723 2 738.868076 1475.7216 71960.05 0.71798 0.00053049 -0.23287 -0.00017206 0.48511 0.00035843 738.867894831092 743.872200881185 50.134 0.50856 50.134 49.874 50.382 0 219 45 7 0 0 0 9.4251E-24 2 28301 157.97 157.97 1 0.88897 0.96207 0 27199000 11673000 15526000 6026 247 2278 2340 9386;9387 9387 DSSLVNEQSQITR 13 0 1 Unmodified _DSSLVNEQSQITR_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 738.868 2 738.868076 1475.7216 70896.13 0.57699 0.00042632 -0.089838 -6.6379E-05 0.48716 0.00035994 738.867817683599 743.87216567808 58.934 0.69447 58.934 58.629 59.323 0 269 55 7 0 0 0 4.492E-06 1 29973 107.03 107.03 1 1.6083 1.3843 0 7243900 2758100 4485800 6027 247 2278 2340 9388 9388 DSSQSPSQVDQFCK 14 1 0 Unmodified _DSSQSPSQVDQFCK_ 0 0 0 B2R5I8;Q13637 B2R5I8 B2R5I8 RAB32 Ras-related protein Rab-32 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.8567 2 806.849026 1611.6835 NaN NaN NaN 0.48525 0.00039152 NaN NaN NaN NaN 41.84 0.28966 41.84 41.695 41.984 0 0 0 0 0.00056856 1 22082 78.342 62.712 1 NaN NaN 0 2206700 0 2206700 6028 833 2279 2341 9389 9389 DSSQVHPLAVLLLTDGDVHIR 21 0 1 Unmodified _DSSQVHPLAVLLLTDGDVHIR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.0853 3 762.413125 2284.21754 NaN NaN NaN 0.021589 1.646E-05 NaN NaN NaN NaN 117.35 0.65215 117.35 117.09 117.74 0 0 0 0 0.0015751 2 75221 39.935 31.116 1 NaN NaN 0 5034000 0 5034000 6029 122 2280 2342 9390;9391 9391 DSSQVHPLAVLLLTDGDVHIR 21 0 1 Unmodified _DSSQVHPLAVLLLTDGDVHIR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 762.4131 3 762.413125 2284.21754 71603.27 0.84411 0.00064356 0.032166 2.4524E-05 0.87627 0.00066808 762.747359703239 766.083468633862 127.82 0.54929 127.82 127.46 128.01 0 110 20 9 0 0 0 2.225E-05 2 77047 41.256 41.256 1 1.5164 1.3027 0 6409300 2579600 3829700 6030 122 2280 2342 9392;9393 9393 DSSQVHPLAVLLLTDGDVHIR 21 0 1 Unmodified _DSSQVHPLAVLLLTDGDVHIR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.0842 3 762.413125 2284.21754 70910.91 0.82736 0.00063079 0.12864 9.8078E-05 0.956 0.00072887 762.747514511302 766.08358042803 127.48 0.37457 127.48 127.3 127.68 0 89 15 8 0 0 0 0.0011584 2 75890 29.447 29.447 1 1.3692 1.136 0 5594100 2140400 3453700 6031 122 2280 2342 9394;9395 9394 DSSSPWQCPVCR 12 0 1 Unmodified _DSSSPWQCPVCR_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q6PJR5;E7EV75 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.8104 2 739.811193 1477.60783 73651.78 0.4895 0.00036214 -0.061864 -4.5768E-05 0.42763 0.00031637 739.810792005301 744.815704773356 58.504 0.35099 58.504 58.361 58.712 0 83 28 4 0 0 0 0.0033538 1 33211 56.258 45.735 1 1.2196 1.2434 0 6836000 2908500 3927500 6032 1758 2281 2343 9396 9396 DSSSPWQCPVCR 12 0 1 Unmodified _DSSSPWQCPVCR_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q6PJR5;E7EV75 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.811 2 739.811193 1477.60783 72413.8 0.75787 0.00056068 -0.23848 -0.00017643 0.5194 0.00038426 739.810862366596 744.815376860945 57.583 0.3555 57.583 57.375 57.731 3.8147E-06 93 29 5 0 0 0 0.0015283 3 33299 60.91 53.265 1 1.0551 1.0607 0 11069000 5767700 5301400 6033 1758 2281 2343 9397;9398;9399 9397 DSTEYFIVFEPR 12 0 1 Unmodified _DSTEYFIVFEPR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.8622 2 751.861731 1501.70891 71496.21 0.74913 0.00056325 0.4175 0.0003139 1.1666 0.00087715 751.861955077343 756.866102805891 117.95 0.5023 117.95 117.69 118.2 7.6294E-06 136 29 6 0 0 0 0.00020732 3 75580 80.24 80.24 1 0.94423 0.98973 0 12346000 6794700 5551100 6034 684 2282 2344 9400;9401;9402 9402 DSTEYFIVFEPR 12 0 1 Unmodified _DSTEYFIVFEPR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.8625 2 751.861731 1501.70891 72235.63 0.7232 0.00054375 0.35459 0.0002666 1.0778 0.00081035 751.861728428809 756.866039649583 117.56 0.59415 117.56 117.19 117.79 0 154 35 6 0 0 0 0.00018123 2 77019 85.958 85.958 1 1.0976 1.0802 0 13325000 6292100 7032900 6035 684 2282 2344 9403;9404 9403 DSTEYFIVFEPR 12 0 1 Unmodified _DSTEYFIVFEPR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.8619 2 751.861731 1501.70891 71045.78 0.81237 0.00061079 -0.14741 -0.00011083 0.66496 0.00049996 751.861501964562 756.865737963668 129.32 0.57451 129.32 129.07 129.65 0 127 26 7 0 0 0 0.01966 1 78292 39.918 38.721 1 1.4745 1.233 0 3744100 1393600 2350600 6036 684 2282 2344 9405 9405 DSTEYFIVFEPR 12 0 1 Unmodified _DSTEYFIVFEPR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.8665 2 751.861731 1501.70891 72496 0.8824 0.00066344 0.25654 0.00019289 1.1389 0.00085633 751.861587249754 756.865836667492 129.3 0.65985 129.3 128.98 129.63 0 138 29 7 0 0 0 0.010019 2 77159 46.706 46.706 1 1.6447 1.4453 0 4151000 1381800 2769200 6037 684 2282 2344 9406;9407 9406 DSTLIMQLLR 10 0 1 Oxidation (M) _DSTLIM(ox)QLLR_ DSTLIM(1)QLLR DSTLIM(105.57)QLLR 0 1 0 D0PNI1;P63104;B0AZS6;E7EX29;B7Z2E6;H0YB80;Q2F831;P31947;P27348;Q53S41;B4DMT8;B4DY04;V9HWD6;P31946;B5BU24;A0A024R1K7;Q04917;Q9H4N8;B2R6N6;B4DE78;B3KNB4;P61981;B4DHC4;V9HW98;P62258;G9K389;G9K388;B7ZA86;K7EM20 D0PNI1;P27348;V9HWD6;A0A024R1K7;B4DE78;V9HW98 D0PNI1 YWHAZ;SFN;YWHAQ;HEL-S-1;YWHAB;YWHAH;YWHAG;HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein zeta/delta;14-3-3 protein sigma;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.3364 2 603.331556 1204.64856 78591.77 0.76071 0.00045896 0.04549 2.7446E-05 0.8062 0.00048641 603.332207374895 608.335865113353 116.62 0.53848 116.62 116.37 116.9 0 160 37 6 0 0 0 4.626E-06 2 74326 105.57 105.57 1 2.4621 2.5622 0 21924000 6494800 15429000 6038 1182;1637;1523;912;1536;78 2283 2345 9408;9409 9408 48 DSTLIMQLLR 10 0 1 Oxidation (M) _DSTLIM(ox)QLLR_ DSTLIM(1)QLLR DSTLIM(96.71)QLLR 0 1 0 D0PNI1;P63104;B0AZS6;E7EX29;B7Z2E6;H0YB80;Q2F831;P31947;P27348;Q53S41;B4DMT8;B4DY04;V9HWD6;P31946;B5BU24;A0A024R1K7;Q04917;Q9H4N8;B2R6N6;B4DE78;B3KNB4;P61981;B4DHC4;V9HW98;P62258;G9K389;G9K388;B7ZA86;K7EM20 D0PNI1;P27348;V9HWD6;A0A024R1K7;B4DE78;V9HW98 D0PNI1 YWHAZ;SFN;YWHAQ;HEL-S-1;YWHAB;YWHAH;YWHAG;HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein zeta/delta;14-3-3 protein sigma;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.3318 2 603.331556 1204.64856 78094.54 0.95559 0.00057654 -0.3921 -0.00023656 0.5635 0.00033998 603.331508326148 608.335683750839 117.14 0.78639 117.14 116.81 117.6 0 217 56 7 0 0 0 5.7758E-05 2 74986 96.711 96.711 1 2.1907 2.2479 0 19334000 5673600 13660000 6039 1182;1637;1523;912;1536;78 2283 2345 9410;9411 9411 48 DSTLIMQLLR 10 0 1 Oxidation (M) _DSTLIM(ox)QLLR_ DSTLIM(1)QLLR DSTLIM(95.1)QLLR 0 1 0 D0PNI1;P63104;B0AZS6;E7EX29;B7Z2E6;H0YB80;Q2F831;P31947;P27348;Q53S41;B4DMT8;B4DY04;V9HWD6;P31946;B5BU24;A0A024R1K7;Q04917;Q9H4N8;B2R6N6;B4DE78;B3KNB4;P61981;B4DHC4;V9HW98;P62258;G9K389;G9K388;B7ZA86;K7EM20 D0PNI1;P27348;V9HWD6;A0A024R1K7;B4DE78;V9HW98 D0PNI1 YWHAZ;SFN;YWHAQ;HEL-S-1;YWHAB;YWHAH;YWHAG;HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein zeta/delta;14-3-3 protein sigma;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.336 2 603.331556 1204.64856 77728.31 0.61638 0.00037188 0.17578 0.00010605 0.79216 0.00047793 603.332363076292 608.335963021383 116.1 0.68101 116.1 115.72 116.41 0 205 43 7 0 0 0 8.1635E-05 2 75765 95.099 95.099 1 2.2946 2.4706 0 25817000 8332100 17485000 6040 1182;1637;1523;912;1536;78 2283 2345 9412;9413 9413 48 DSTLIMQLLR 10 0 1 Oxidation (M) _DSTLIM(ox)QLLR_ DSTLIM(1)QLLR DSTLIM(103.83)QLLR 0 1 0 D0PNI1;P63104;B0AZS6;E7EX29;B7Z2E6;H0YB80;Q2F831;P31947;P27348;Q53S41;B4DMT8;B4DY04;V9HWD6;P31946;B5BU24;A0A024R1K7;Q04917;Q9H4N8;B2R6N6;B4DE78;B3KNB4;P61981;B4DHC4;V9HW98;P62258;G9K389;G9K388;B7ZA86;K7EM20 D0PNI1;P27348;V9HWD6;A0A024R1K7;B4DE78;V9HW98 D0PNI1 YWHAZ;SFN;YWHAQ;HEL-S-1;YWHAB;YWHAH;YWHAG;HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein zeta/delta;14-3-3 protein sigma;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.336 2 603.331556 1204.64856 77243.85 0.58378 0.00035221 -0.050322 -3.0361E-05 0.53346 0.00032185 603.331158475261 608.335890279444 116.51 0.64537 116.51 116.31 116.96 0 183 40 6 0 0 0 5.7456E-06 3 76421 103.83 94.302 1 2.1677 2.1712 0 18669000 5335400 13334000 6041 1182;1637;1523;912;1536;78 2283 2345 9414;9415;9416 9415 48 DSTLIMQLLR 10 0 1 Unmodified _DSTLIMQLLR_ 0 0 0 D0PNI1;P63104;B0AZS6;E7EX29;B7Z2E6;H0YB80;Q2F831;P31947;P27348;Q53S41;B4DMT8;B4DY04;V9HWD6;P31946;B5BU24;A0A024R1K7;Q04917;Q9H4N8;B2R6N6;B4DE78;B3KNB4;P61981;B4DHC4;V9HW98;P62258;G9K389;G9K388;B7ZA86;K7EM20 D0PNI1;P27348;V9HWD6;A0A024R1K7;B4DE78;V9HW98 D0PNI1 YWHAZ;SFN;YWHAQ;HEL-S-1;YWHAB;YWHAH;YWHAG;HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein zeta/delta;14-3-3 protein sigma;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.3387 2 595.334098 1188.65364 82141.48 1.0164 0.00060508 -0.51243 -0.00030506 0.50394 0.00030001 595.333816086103 600.338365751109 124.76 0.467 124.76 124.47 124.93 0 85 32 5 0 0 0 0.0077219 2 80915 57.047 41.385 1 1.8683 1.9665 0 4161100 1678000 2483100 6042 1182;1637;1523;912;1536;78 2283 2346 9417;9418 9417 DSTLIMQLLR 10 0 1 Unmodified _DSTLIMQLLR_ 0 0 0 D0PNI1;P63104;B0AZS6;E7EX29;B7Z2E6;H0YB80;Q2F831;P31947;P27348;Q53S41;B4DMT8;B4DY04;V9HWD6;P31946;B5BU24;A0A024R1K7;Q04917;Q9H4N8;B2R6N6;B4DE78;B3KNB4;P61981;B4DHC4;V9HW98;P62258;G9K389;G9K388;B7ZA86;K7EM20 D0PNI1;P27348;V9HWD6;A0A024R1K7;B4DE78;V9HW98 D0PNI1 YWHAZ;SFN;YWHAQ;HEL-S-1;YWHAB;YWHAH;YWHAG;HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein zeta/delta;14-3-3 protein sigma;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.3344 2 595.334098 1188.65364 80790.83 1.0209 0.00060778 0.24592 0.00014641 1.2668 0.00075418 595.33392015778 600.338548708983 124.25 0.4614 124.25 124.04 124.5 7.6294E-06 66 28 4 0 0 0 0.0015265 2 82600 73.248 61.737 1 1.4694 1.4837 0 5643500 1985700 3657800 6043 1182;1637;1523;912;1536;78 2283 2346 9419;9420 9420 DSVAQGTTNVHSSEHAGR 18 0 1 Unmodified _DSVAQGTTNVHSSEHAGR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.6257 3 618.289265 1851.84597 77678.84 0.20588 0.00012729 0.75312 0.00046565 0.959 0.00059294 618.289744132582 621.625902470048 15.235 0.77976 15.235 15.084 15.864 0 128 44 8 0 0 0 3.6276E-64 3 2996 135.08 124.26 1 1.9512 2.1732 0 80854000 26117000 54737000 6044 1569 2284 2347 9421;9422;9423 9421 DSVAQGTTNVHSSEHAGR 18 0 1 Unmodified _DSVAQGTTNVHSSEHAGR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.9344 2 926.930259 1851.84597 64869.5 0.24467 0.0002268 1.1536 0.0010693 1.3982 0.0012961 926.931611627425 931.935617055575 15.235 0.1678 15.235 15.133 15.301 0 19 4 6 0 0 0 2.9383E-30 2 3001 147.12 128.66 1 1.6949 1.7761 0 12417000 4661400 7755900 6045 1569 2284 2347 9424;9425 9424 DSVAQGTTNVHSSEHAGR 18 0 1 Unmodified _DSVAQGTTNVHSSEHAGR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.2897 3 618.289265 1851.84597 77389.35 0.0091131 5.6345E-06 0.17385 0.00010749 0.18297 0.00011313 618.289541217343 621.625526941262 15.175 0.75685 15.175 15.057 15.814 -9.5367E-07 111 43 7 0 0 0 3.3666E-23 2 2870 121.19 117.86 1 1.7966 2.0456 0 109340000 38248000 71090000 6046 1569 2284 2347 9426;9427 9426 DSVAQGTTNVHSSEHAGR 18 0 1 Unmodified _DSVAQGTTNVHSSEHAGR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.9599 3 618.289265 1851.84597 76392.8 0.28827 0.00017823 0.13618 8.4201E-05 0.42445 0.00026244 618.289757435582 621.625571901476 16.516 0.78063 16.516 16.35 17.131 0 243 51 13 0 0 0 1.642E-06 2 3192 73.11 73.11 1 3.2824 2.8318 0 79236000 18797000 60439000 6047 1569 2284 2347 9428;9429 9428 DSVAQGTTNVHSSEHAGR 18 0 1 Unmodified _DSVAQGTTNVHSSEHAGR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.6243 3 618.289265 1851.84597 76490.3 0.07866 4.8635E-05 0.50069 0.00030957 0.57935 0.0003582 618.289991846312 621.625811057483 16.587 0.71007 16.587 16.441 17.151 0 271 56 13 0 0 0 7.227E-06 2 2959 58.688 55.361 1 3.3572 2.9288 0 48538000 11578000 36960000 6048 1569 2284 2347 9430;9431 9431 DSVVAGFQWATK 12 1 0 Unmodified _DSVVAGFQWATK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.8332 2 654.832777 1307.651 75941.39 0.79817 0.00052266 0.056847 3.7226E-05 0.85501 0.00055989 654.832819758826 658.839929515653 97.446 0.96895 97.446 96.933 97.902 7.6294E-06 374 84 7 0 0 0 0.00072982 2 59330 66.663 66.663 1 3.1369 3.5193 0 66568000 10533000 56035000 6049 1478 2285 2348 9432;9433 9433 DSWVDIFR 8 0 1 Unmodified _DSWVDIFR_ 0 0 0 CON__Q3ZBS7 CON__Q3ZBS7 CON__Q3ZBS7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7582 2 519.256174 1036.49779 NaN NaN NaN -0.12189 -6.3291E-05 NaN NaN NaN NaN 115.88 0.73582 115.88 115.52 116.25 0 0 0 0 0.027685 1 75488 60.682 46.013 1 NaN NaN 0 12434000 12434000 0 + 6050 1173 2286 2349 9434 9434 DSYGATSHLPNK 12 1 0 Unmodified _DSYGATSHLPNK_ 0 0 0 X6RER8;B0QZ72;B3KV88;A0A087X169;Q5T6S3 X6RER8 X6RER8 PHF19 PHD finger protein 19 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.3188 2 645.309666 1288.60478 NaN NaN NaN 0.38538 0.00024869 NaN NaN NaN NaN 25.343 0.3391 25.343 25.128 25.467 0 0 0 0 0.00088014 1 10965 84.198 67.527 1 NaN NaN 0 4252700 0 4252700 6051 448 2287 2350 9435 9435 DSYLILETLPTEYDSR 16 0 1 Unmodified _DSYLILETLPTEYDSR_ 0 0 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5;E9PMD8;E9PN50;E9PLG2 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 963.4764 2 957.970196 1913.92584 62556.25 0.5518 0.00052861 -0.15314 -0.0001467 0.39866 0.00038191 957.969748287723 962.974152659795 121.08 0.43758 121.08 120.86 121.3 -7.6294E-06 148 29 8 0 0 0 7.2064E-07 2 78105 121.02 121.02 1 1.8081 1.8376 0 18355000 6574700 11780000 6052 617 2288 2351 9436;9437 9436 DSYLILETLPTEYDSR 16 0 1 Unmodified _DSYLILETLPTEYDSR_ 0 0 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5;E9PMD8;E9PN50;E9PLG2 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 963.4741 2 957.970196 1913.92584 62306.69 0.81515 0.00078088 -0.32808 -0.00031429 0.48707 0.0004666 958.470835861828 962.974193550949 120.69 0.48354 120.69 120.44 120.92 0 136 34 6 0 0 0 4.5101E-07 2 79717 119.76 119.76 1 2.0695 2.0752 0 17842000 5907300 11935000 6053 617 2288 2351 9438;9439 9439 DSYLILETLPTEYDSR 16 0 1 Unmodified _DSYLILETLPTEYDSR_ 0 0 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5;E9PMD8;E9PN50;E9PLG2 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 963.476 2 957.970196 1913.92584 61278.45 0.7264 0.00069587 -0.012899 -1.2357E-05 0.7135 0.00068351 957.970216207549 962.973754248432 132.95 0.42755 132.95 132.71 133.14 0 98 20 7 0 0 0 0.00015296 2 80905 84.718 84.718 1 1.4507 1.2214 0 4583100 1617800 2965400 6054 617 2288 2351 9440;9441 9440 DSYLILETLPTEYDSR 16 0 1 Unmodified _DSYLILETLPTEYDSR_ 0 0 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5;E9PMD8;E9PN50;E9PLG2 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 963.4791 2 957.970196 1913.92584 62368.74 0.80674 0.00077283 -0.34112 -0.00032678 0.46562 0.00044605 958.470969867777 962.973634864988 132.78 0.43843 132.78 132.56 133 -1.5259E-05 80 19 6 0 0 0 0.0049677 2 79818 52.495 51.661 1 1.421 1.214 0 4518800 2093900 2424900 6055 617 2288 2351 9442;9443 9443 DSYVGDEAQSKR 12 1 1 Unmodified _DSYVGDEAQSKR_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.8273 2 677.815313 1353.61607 74016.67 0.10553 7.153E-05 0.47512 0.00032204 0.58065 0.00039357 677.815517507667 686.826980002995 19.313 0.21739 19.313 19.194 19.411 0 42 10 6 0 0 0 0.00095703 1 5041 69.01 65.423 1 4.0184 3.3803 0 3259600 575610 2684000 6056 1624;1656;1100 2289 2352 9444 9444 DTAEGVSQELISAGLVDGR 19 0 1 Unmodified _DTAEGVSQELISAGLVDGR_ 0 0 0 A0A024R2M7;O95747 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 964.4867 2 958.981626 1915.9487 63330.15 0.68431 0.00065624 -0.23067 -0.00022121 0.45364 0.00043503 959.481682691738 963.985655271009 111.99 0.41968 111.99 111.79 112.21 0 90 29 5 0 0 0 3.2862E-05 1 70614 72.175 64.805 1 3.3253 3.3886 0 6929500 3378300 3551200 6057 117 2290 2353 9445 9445 DTAEGVSQELISAGLVDGR 19 0 1 Unmodified _DTAEGVSQELISAGLVDGR_ 0 0 0 A0A024R2M7;O95747 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 963.9838 2 958.981626 1915.9487 NaN NaN NaN -0.2014 -0.00019314 NaN NaN NaN NaN 111.58 0.37706 111.58 111.35 111.73 0 0 0 0 2.3358E-23 1 71986 119.32 88.443 1 NaN NaN 0 6688100 0 6688100 6058 117 2290 2353 9446 9446 DTAEGVSQELISAGLVDGR 19 0 1 Unmodified _DTAEGVSQELISAGLVDGR_ 0 0 0 A0A024R2M7;O95747 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 958.9825 2 958.981626 1915.9487 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.52 1 111.52 111.02 112.02 7.6294E-06 0 0 0 0.0002933 1 71993 77.527 62.325 1 6059 117 2290 2353 9447 9447 DTCHELDELQLCK 13 1 0 Unmodified _DTCHELDELQLCK_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B7Z2J6;Q6PJR5 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 835.3799 2 830.868905 1659.72326 67474.81 0.49711 0.00041303 0.027778 2.308E-05 0.52489 0.00043611 830.868514020271 834.876485214519 83.125 0.43214 83.125 82.861 83.293 0 93 24 5 0 0 0 0.013701 1 45200 37.995 34.867 1 2.102 1.7359 0 2339700 801540 1538100 6060 1758 2291 2354 9448 9448 DTCHELDELQLCK 13 1 0 Unmodified _DTCHELDELQLCK_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B7Z2J6;Q6PJR5 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.9203 3 554.248362 1659.72326 81319.63 0.3025 0.00016766 0.21016 0.00011648 0.51266 0.00028414 554.248765556022 556.919943738416 83.121 0.49043 83.121 82.861 83.351 0 133 27 6 0 0 0 0.016346 1 45257 23.143 22.914 1 1.7333 1.3709 0 4154500 1463500 2691000 6061 1758 2291 2354 9449 9449 DTCHELDELQLCK 13 1 0 Unmodified _DTCHELDELQLCK_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B7Z2J6;Q6PJR5 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.92 3 554.248362 1659.72326 83415.52 0.62395 0.00034582 -0.45525 -0.00025232 0.1687 9.3501E-05 554.248053057381 556.919473987191 83.321 0.50482 83.321 83.053 83.558 0 115 27 6 0 0 0 8.1616E-05 1 44518 52.576 51.431 1 1.7966 1.428 0 3118100 1358400 1759800 6062 1758 2291 2354 9450 9450 DTDDVPMILVGNK 13 1 0 Oxidation (M) _DTDDVPM(ox)ILVGNK_ DTDDVPM(1)ILVGNK DTDDVPM(69.91)ILVGNK 0 1 0 A0A024RB87;P61224;F5H6R7;F5H004;F5GX62;Q9BXV4;E7ESV4;F5H7Y6;A0A0J9YXB3;A6NIZ1;F5H823;B7ZB78;F5GZG1 A0A024RB87 A0A024RB87 RAP1B Ras-related protein Rap-1b;Ras-related protein Rap-1b-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.8601 2 716.853049 1431.69155 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.831 1 88.831 88.331 89.331 0 0 0 0 0.00081024 1 53573 69.915 52.479 1 6063 329 2292 2355 9451 9451 250 DTDEADLVLAK 11 1 0 Unmodified _DTDEADLVLAK_ 0 0 0 V9HWG0;P45973 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.3012 2 595.300975 1188.5874 79524.8 0.7683 0.00045737 0.16531 9.8407E-05 0.93361 0.00055578 595.301042595003 599.30775087465 72.014 0.79329 72.014 71.674 72.467 0 429 64 10 0 0 0 1.5649E-12 1 42110 143.7 136.55 1 0.72665 0.82397 0 157580000 91085000 66491000 6064 1568 2293 2356 9452 9452 DTDEADLVLAK 11 1 0 Unmodified _DTDEADLVLAK_ 0 0 0 V9HWG0;P45973 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.3082 2 595.300975 1188.5874 79719.61 0.6843 0.00040736 0.28952 0.00017235 0.97381 0.00057971 595.300982461462 599.3077827168 70.897 0.87943 70.897 70.408 71.288 -7.6294E-06 482 66 12 0 0 0 1.3165E-12 2 42446 144.79 144.79 1 0.7886 0.91888 0 251100000 140560000 110550000 6065 1568 2293 2356 9453;9454 9454 DTDEADLVLAK 11 1 0 Unmodified _DTDEADLVLAK_ 0 0 0 V9HWG0;P45973 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.301 2 595.300975 1188.5874 79946.45 0.52554 0.00031285 0.014439 8.5954E-06 0.53998 0.00032145 595.300956254878 599.308142452524 81.787 0.8684 81.787 81.466 82.334 7.6294E-06 272 50 9 0 0 0 1.564E-06 3 44481 112.11 103.19 1 0.86316 0.68052 0 17714000 9678700 8035700 6066 1568 2293 2356 9455;9456;9457 9457 DTDEADLVLAK 11 1 0 Unmodified _DTDEADLVLAK_ 0 0 0 V9HWG0;P45973 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.3005 2 595.300975 1188.5874 80576.16 0.50094 0.00029821 0.13362 7.9546E-05 0.63456 0.00037775 595.30097980697 599.308097860267 82.139 0.7683 82.139 81.713 82.481 0 254 45 9 0 0 0 0.00041586 2 43722 80.231 80.231 1 0.87152 0.70034 0 16550000 8673200 7876700 6067 1568 2293 2356 9458;9459 9459 DTDIVDEAIYYFK 13 1 0 Unmodified _DTDIVDEAIYYFK_ 0 0 0 F8VR50;C9JZD1;B4DM63;Q2LE71;B2R4D5;O15145 F8VR50 F8VR50 ARPC3 Actin-related protein 2/3 complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.3882 2 796.379954 1590.74536 71811.1 0.80201 0.00063871 0.21551 0.00017163 1.0175 0.00081033 796.380169261392 800.387060542339 128.56 0.4259 128.56 128.34 128.77 0 126 28 6 0 0 0 7.9327E-05 2 83834 94.297 94.297 1 2.4068 2.4162 0 5130800 1346200 3784600 6068 826 2294 2357 9460;9461 9460 DTDIVDEAIYYFK 13 1 0 Unmodified _DTDIVDEAIYYFK_ 0 0 0 F8VR50;C9JZD1;B4DM63;Q2LE71;B2R4D5;O15145 F8VR50 F8VR50 ARPC3 Actin-related protein 2/3 complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.3857 2 796.379954 1590.74536 69298.87 0.96923 0.00077188 -0.099052 -7.8883E-05 0.87018 0.00069299 796.880649879556 800.387015780823 128.28 0.36742 128.28 128.03 128.4 0 104 22 8 0 0 0 4.1308E-05 2 85732 97.456 97.456 1 2.295 2.2799 0 6140000 2098000 4042000 6069 826 2294 2357 9462;9463 9463 DTEAGETFSSVQANLSK 17 1 0 Unmodified _DTEAGETFSSVQANLSK_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.9315 2 892.42087 1782.82719 66025.38 0.67821 0.00060525 0.10365 9.2503E-05 0.78187 0.00069776 892.421559453169 896.42751854214 79.789 0.49571 79.789 79.575 80.07 0 161 43 6 0 0 0 1.051E-07 3 47349 99.161 99.161 1 0.43808 0.45808 0 15097000 9963100 5133900 6070 1542 2295 2358 9464;9465;9466 9466 DTEAGETFSSVQANLSK 17 1 0 Unmodified _DTEAGETFSSVQANLSK_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.4219 2 892.42087 1782.82719 65732.18 0.67444 0.00060189 0.48178 0.00042995 1.1562 0.0010318 892.42206047988 896.427801455386 78.97 0.47842 78.97 78.731 79.209 0 208 40 7 0 0 0 2.2243E-18 3 47826 134.68 134.68 1 0.45741 0.46527 0 16865000 11467000 5398100 6071 1542 2295 2358 9467;9468;9469 9467 DTEAGETFSSVQANLSK 17 1 0 Unmodified _DTEAGETFSSVQANLSK_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 892.423 2 892.42087 1782.82719 64410.66 0.63671 0.00056822 0.26322 0.0002349 0.89993 0.00080312 892.922209600279 896.428033561702 91.284 0.61821 91.284 91.031 91.649 7.6294E-06 239 42 9 0 0 0 1.4438E-08 2 50658 99.991 99.991 1 0.70172 0.56192 0 7276800 4402100 2874600 6072 1542 2295 2358 9470;9471 9471 DTEAGETFSSVQANLSK 17 1 0 Unmodified _DTEAGETFSSVQANLSK_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 896.9323 2 892.42087 1782.82719 64366.11 0.17834 0.00015915 0.7273 0.00064906 0.90563 0.00080821 892.922654222248 896.929948820799 91.368 0.60994 91.368 91.13 91.74 0 254 43 8 0 0 0 0.0014902 2 49833 40.477 40.477 1 0.70248 0.57324 0 6337600 3877500 2460100 6073 1542 2295 2358 9472;9473 9473 DTEEPLPVK 9 1 0 Unmodified _DTEEPLPVK_ 0 0 0 P18583;H7C1M2 P18583 P18583 SON Protein SON MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.277 2 514.268947 1026.52334 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.282 1 50.282 49.782 50.782 0 0 0 0 0.021743 1 27744 55.676 33.184 1 6074 1499 2296 2359 9474 9474 DTEPLIQTAK 10 1 0 Unmodified _DTEPLIQTAK_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;Q96GI1 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.3079 2 558.300778 1114.587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.752 1 47.752 47.252 48.252 -3.8147E-06 0 0 0 8.4605E-06 1 25942 99.802 71.628 1 6075 960 2297 2360 9475 9475 DTEPLIQTAK 10 1 0 Unmodified _DTEPLIQTAK_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;Q96GI1 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.3085 2 558.300778 1114.587 NaN NaN NaN -0.028502 -1.5912E-05 NaN NaN NaN NaN 54.855 0.62025 54.855 54.514 55.134 0 0 0 0 0.042278 1 26737 48.794 28.274 1 NaN NaN 0 776560 0 776560 6076 960 2297 2360 9476 9476 DTEQYEREDFLIK 13 1 1 Unmodified _DTEQYEREDFLIK_ 0 0 1 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DJV5;Q86X79;Q05BL3;Q6PKI5;Q6PIN4;F8VZ56 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.6061 3 562.60542 1684.79443 NaN NaN NaN 0.036251 2.0395E-05 NaN NaN NaN NaN 73.505 0.52809 73.505 73.235 73.763 0 0 0 0 0.0025309 1 44155 55.314 41.901 1 NaN NaN 0 11023000 11023000 0 6077 339 2298 2361 9477 9477 DTFEHDPSESIDEFNK 16 1 0 Unmodified _DTFEHDPSESIDEFNK_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.4096 2 955.40796 1908.80137 63073.25 0.4834 0.00046184 -0.26588 -0.00025403 0.21751 0.00020782 955.407972939806 959.414371354897 70.073 0.35743 70.073 69.948 70.305 0 107 33 5 0 0 0 6.3609E-07 3 40757 98.105 98.105 1 1.0005 1.0365 0 11222000 5332700 5889300 6078 2083 2299 2362 9478;9479;9480 9479 DTFEHDPSESIDEFNK 16 1 0 Unmodified _DTFEHDPSESIDEFNK_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 955.4084 2 955.40796 1908.80137 62516.56 0.51495 0.00049198 -0.038097 -3.6398E-05 0.47685 0.00045559 955.408136121356 959.415117546052 68.976 0.43065 68.976 68.819 69.25 0 107 35 5 0 0 0 0.00015532 1 41009 72.29 72.29 1 1.158 1.1974 0 18529000 7815700 10713000 6079 2083 2299 2362 9481 9481 DTFEHDPSESIDEFNK 16 1 0 Unmodified _DTFEHDPSESIDEFNK_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.6088 3 637.274399 1908.80137 76671.19 0.543 0.00034604 0.095523 6.0874E-05 0.63852 0.00040691 637.274501253598 639.945782379322 80.364 0.53382 80.364 80.076 80.61 -7.6294E-06 176 31 8 0 0 0 0.039433 1 42492 9.9127 9.9127 1 1.0935 0.89699 0 5118200 2550100 2568100 6080 2083 2299 2362 9482 9482 DTFYDNFENEPILYGR 16 0 1 Unmodified _DTFYDNFENEPILYGR_ 0 0 0 W0HJ78;B0QYD3;Q9UH17;Q6ICH2;B2CML4;Q96AK3 W0HJ78;Q6ICH2 W0HJ78 APOBEC3B;bK150C2.9;APOBEC3DE;APOBEC3D DNA dC->dU-editing enzyme APOBEC-3B;DNA dC->dU-editing enzyme APOBEC-3D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 996.9515 2 996.952337 1991.89012 62082.99 0.29542 0.00029452 -0.19514 -0.00019454 0.10028 9.9978E-05 997.453772752946 1002.45755497211 114.52 0.44954 114.52 114.3 114.75 -7.6294E-06 128 31 6 0 0 0 2.0479E-09 1 72678 111.52 93.786 1 0.45211 0.46932 0 13618000 9241400 4376800 6081 807;823 2300 2363 9483 9483 DTFYDNFENEPILYGR 16 0 1 Unmodified _DTFYDNFENEPILYGR_ 0 0 0 W0HJ78;B0QYD3;Q9UH17;Q6ICH2;B2CML4;Q96AK3 W0HJ78;Q6ICH2 W0HJ78 APOBEC3B;bK150C2.9;APOBEC3DE;APOBEC3D DNA dC->dU-editing enzyme APOBEC-3B;DNA dC->dU-editing enzyme APOBEC-3D MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 997.9555 2 996.952337 1991.89012 60636.14 0.41878 0.00041751 -0.0026809 -2.6728E-06 0.4161 0.00041483 997.45403864724 1001.95659302686 125.26 0.56465 125.26 125.02 125.58 0 100 22 7 0 0 0 0.0045746 2 75127 36.847 34.881 1 0.76673 0.65147 0 5261400 2938000 2323400 6082 807;823 2300 2363 9484;9485 9484 DTFYDNFENEPILYGR 16 0 1 Unmodified _DTFYDNFENEPILYGR_ 0 0 0 W0HJ78;B0QYD3;Q9UH17;Q6ICH2;B2CML4;Q96AK3 W0HJ78;Q6ICH2 W0HJ78 APOBEC3B;bK150C2.9;APOBEC3DE;APOBEC3D DNA dC->dU-editing enzyme APOBEC-3B;DNA dC->dU-editing enzyme APOBEC-3D MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1001.9576 2 996.952337 1991.89012 61321.45 0.4035 0.00040227 0.35511 0.00035403 0.75861 0.0007563 997.453973416289 1002.45772326718 125.2 0.60617 125.2 124.95 125.56 0 117 25 8 0 0 0 0.0073977 2 74174 48.568 47.057 1 0.8973 0.74802 0 6409600 3618200 2791400 6083 807;823 2300 2363 9486;9487 9487 DTGIFLDLMHLK 12 1 0 Oxidation (M) _DTGIFLDLM(ox)HLK_ DTGIFLDLM(1)HLK DTGIFLDLM(123.75)HLK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.879 2 709.871045 1417.72754 71721.47 0.99234 0.00070444 -0.27889 -0.00019798 0.71345 0.00050646 709.8708491985 713.878114027832 109.04 0.96835 109.04 108.49 109.46 0 328 64 9 0 0 0 3.394E-09 2 67924 123.75 123.75 1 0.64889 0.73472 0 89330000 52776000 36554000 6084 82 2301 2364 9488;9489 9488 75 DTGIFLDLMHLK 12 1 0 Oxidation (M) _DTGIFLDLM(ox)HLK_ DTGIFLDLM(1)HLK DTGIFLDLM(123.86)HLK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.8788 2 709.871045 1417.72754 NaN NaN NaN 1.5552 0.001104 NaN NaN NaN NaN 108.43 1.1493 108.43 107.78 108.93 0 0 0 0 9.2584E-14 1 69083 123.86 105.42 1 NaN NaN 0 33217000 0 33217000 6085 82 2301 2364 9490 9490 75 DTGIFLDLMHLK 12 1 0 Oxidation (M) _DTGIFLDLM(ox)HLK_ DTGIFLDLM(1)HLK DTGIFLDLM(112.3)HLK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.8713 2 709.871045 1417.72754 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.27 1 108.27 107.77 108.77 0 0 0 0 5.7446E-11 1 69267 112.3 75.104 1 6086 82 2301 2364 9491 9491 75 DTGIFLDLMHLK 12 1 0 Unmodified _DTGIFLDLMHLK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.8736 2 701.873588 1401.73262 NaN NaN NaN -0.093431 -6.5576E-05 NaN NaN NaN NaN 123.27 0.62987 123.27 123.02 123.65 0 0 0 0 3.8271E-13 1 79796 121.83 105.16 1 NaN NaN 0 8930900 8930900 0 6087 82 2301 2365 9492 9492 DTGIFLDLMHLK 12 1 0 Unmodified _DTGIFLDLMHLK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.8741 2 701.873588 1401.73262 NaN NaN NaN -0.43493 -0.00030527 NaN NaN NaN NaN 122.67 0.61673 122.67 122.42 123.04 0 0 0 0 0.0053565 1 81265 62.303 55.699 1 NaN NaN 0 10966000 10966000 0 6088 82 2301 2365 9493 9493 DTGIFLDLMHLK 12 1 0 Unmodified _DTGIFLDLMHLK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.8746 2 701.873588 1401.73262 NaN NaN NaN 0.011931 8.3742E-06 NaN NaN NaN NaN 134.47 0.25238 134.47 134.37 134.62 0 0 0 0 1.2603E-20 1 82101 141.95 113.94 1 NaN NaN 0 26849000 26849000 0 6089 82 2301 2365 9494 9494 DTGIFLDLMHLK 12 1 0 Unmodified _DTGIFLDLMHLK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 701.8738 2 701.873588 1401.73262 73867 0.75677 0.00053116 -0.21848 -0.00015335 0.53829 0.00037781 701.873458847557 705.880695316577 134.37 0.19623 134.37 134.28 134.47 0 39 7 7 0 0 0 2.3371E-08 2 81113 120.09 114.13 1 0.3227 0.26907 0 41279000 30508000 10771000 6090 82 2301 2365 9495;9496 9495 DTGNFVIGQILSDQSR 16 0 1 Unmodified _DTGNFVIGQILSDQSR_ 0 0 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 880.4445 2 875.44194 1748.86933 NaN NaN NaN 0.22736 0.00019904 NaN NaN NaN NaN 116.55 0.12781 116.55 116.47 116.59 0 0 0 0 0.022983 1 74405 40.725 31.77 1 NaN NaN 0 2727000 0 2727000 6091 408 2302 2366 9497 9497 DTGNFVIGQILSDQSR 16 0 1 Unmodified _DTGNFVIGQILSDQSR_ 0 0 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.447 2 875.44194 1748.86933 NaN NaN NaN -0.42719 -0.00037398 NaN NaN NaN NaN 116.14 0.25028 116.14 116 116.25 -7.6294E-06 0 0 0 7.7547E-05 1 75905 77.185 69.922 1 NaN NaN 0 2452900 0 2452900 6092 408 2302 2366 9498 9498 DTGNIFSEPVPLSEVPDYLDHIK 23 1 0 Unmodified _DTGNIFSEPVPLSEVPDYLDHIK_ 0 0 0 P55201 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.7665 3 862.430509 2584.2697 66431.72 1.3373 0.0011533 -0.20772 -0.00017914 1.1296 0.00097419 862.764377336689 865.436132920401 129.92 0.56503 129.92 129.67 130.23 0 147 29 9 0 0 0 0.00032929 3 84836 34.155 34.155 1 0.87635 0.88579 0 10117000 5903100 4213500 6093 1616 2303 2367 9499;9500;9501 9501 DTGNIFSEPVPLSEVPDYLDHIK 23 1 0 Unmodified _DTGNIFSEPVPLSEVPDYLDHIK_ 0 0 0 P55201 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.4397 3 862.430509 2584.2697 66798.32 0.77305 0.0006667 0.41207 0.00035538 1.1851 0.0010221 862.430445538142 865.437390618439 129.5 0.53995 129.5 129.27 129.81 0 180 30 9 0 0 0 3.6671E-08 2 86463 54.626 54.626 1 0.87678 0.87588 0 15170000 7241800 7928000 6094 1616 2303 2367 9502;9503 9502 DTGVFEHTWK 10 1 0 Unmodified _DTGVFEHTWK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.29 2 610.290745 1218.56694 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.393 1 55.393 54.893 55.893 3.8147E-06 0 0 0 0.008747 1 31139 59.153 44.996 1 6095 1392 2304 2368 9504 9504 DTHDQLSEPSEVR 13 0 1 Unmodified _DTHDQLSEPSEVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.9026 3 504.902348 1511.68521 84838.65 0.50795 0.00025647 0.86053 0.00043448 1.3685 0.00069095 504.902186514457 508.238350865767 31.043 0.7957 31.043 30.675 31.471 -1.9073E-06 316 73 8 0 0 0 0.0022863 2 15190 35.891 32.902 1 1.9104 1.948 0 26978000 7828500 19150000 6096 1754 2305 2369 9505;9506 9505 DTHDQLSEPSEVR 13 0 1 Unmodified _DTHDQLSEPSEVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.8534 2 756.849884 1511.68521 NaN NaN NaN 0.26085 0.00019742 NaN NaN NaN NaN 31.021 0.59455 31.021 30.779 31.374 0 0 0 0 1.0628E-05 1 15174 97.911 88.224 1 NaN NaN 0 16162000 0 16162000 6097 1754 2305 2369 9507 9507 DTHDQLSEPSEVR 13 0 1 Unmodified _DTHDQLSEPSEVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.8508 2 756.849884 1511.68521 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.933 1 30.933 30.433 31.433 0 0 0 0 2.2438E-10 1 15206 110.08 90.315 1 6098 1754 2305 2369 9508 9508 DTHDQLSEPSEVR 13 0 1 Unmodified _DTHDQLSEPSEVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.8497 2 756.849884 1511.68521 71389.88 0.32172 0.00024349 0.056648 4.2874E-05 0.37836 0.00028636 757.351595354449 761.854130561472 30.292 0.46589 30.292 30.089 30.555 0 84 38 4 0 0 0 9.9533E-09 2 14841 115.14 115.14 1 1.6488 1.674 0 20339000 8653800 11685000 6099 1754 2305 2369 9509;9510 9510 DTHDQLSEPSEVR 13 0 1 Unmodified _DTHDQLSEPSEVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.2382 3 504.902348 1511.68521 85782.16 0.10207 5.1534E-05 0.040709 2.0554E-05 0.14278 7.2088E-05 504.902324146952 508.238379627819 30.455 0.66267 30.455 30.101 30.764 0 247 55 6 0 0 0 5.8059E-14 2 14937 117.93 117.93 1 1.8249 1.9934 0 37846000 11171000 26675000 6100 1754 2305 2369 9511;9512 9512 DTHDQLSEPSEVR 13 0 1 Unmodified _DTHDQLSEPSEVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 504.9027 3 504.902348 1511.68521 85831.49 0.11409 5.7603E-05 -0.0084087 -4.2456E-06 0.10568 5.3358E-05 504.902391021821 508.23849937487 36.062 0.56312 36.062 35.705 36.268 0 179 45 6 0 0 0 0.038988 1 16136 12.959 12.959 1 2.3348 1.978 0 5030900 1129100 3901800 6101 1754 2305 2369 9513 9513 DTHDQLSEPSEVR 13 0 1 Unmodified _DTHDQLSEPSEVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.8548 2 756.849884 1511.68521 71882.24 0.60014 0.00045422 -0.1613 -0.00012208 0.43884 0.00033214 756.849821743211 761.853697124878 36.264 0.45334 36.264 35.995 36.448 0 121 40 5 0 0 0 0.0087821 1 15648 43.549 43.549 1 2.4973 2.196 0 3619500 1226100 2393400 6102 1754 2305 2369 9514 9514 DTILAELLQIHK 12 1 0 Unmodified _DTILAELLQIHK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.4135 2 697.406109 1392.79767 74578.05 0.98477 0.00068678 0.098145 6.8447E-05 1.0829 0.00075523 697.406213249727 701.413026258021 121.54 0.6141 121.54 121.29 121.9 0 203 39 7 0 0 0 3.7124E-23 1 78565 169.41 158.88 1 0.86526 0.84867 0 22699000 11358000 11341000 6103 672 2306 2370 9515 9515 DTILAELLQIHK 12 1 0 Unmodified _DTILAELLQIHK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.4142 2 697.406109 1392.79767 73669.75 0.83416 0.00058175 0.42025 0.00029308 1.2544 0.00087483 697.406551672615 701.413162249916 120.98 0.59171 120.98 120.73 121.32 0 170 36 7 0 0 0 3.1148E-18 1 80039 166.34 166.34 1 0.85601 0.92181 0 37836000 20374000 17462000 6104 672 2306 2370 9516 9516 DTILAELLQIHK 12 1 0 Unmodified _DTILAELLQIHK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.4149 2 697.406109 1392.79767 73498.38 0.70858 0.00049417 0.64406 0.00044917 1.3526 0.00094334 697.406658788331 701.413527610471 133.59 0.50879 133.59 133.37 133.88 0 106 20 7 0 0 0 0.0001119 2 81319 105.2 99.414 1 1.4192 1.1384 0 8189500 3293100 4896400 6105 672 2306 2370 9517;9518 9517 DTILAELLQIHK 12 1 0 Unmodified _DTILAELLQIHK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 697.4077 2 697.406109 1392.79767 73527.01 1.026 0.00071551 0.53545 0.00037342 1.5614 0.0010889 697.406788029014 701.413442071516 133.3 0.5166 133.3 133.09 133.61 0 103 19 9 0 0 0 0.00013626 2 80233 93.667 93.667 1 1.522 1.2558 0 11153000 4406300 6747100 6106 672 2306 2370 9519;9520 9520 DTLFCYHK 8 1 0 Unmodified _DTLFCYHK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2593 2 542.250034 1082.48552 82788.75 0.92525 0.00050172 -0.2933 -0.00015904 0.63196 0.00034268 542.250051781227 546.256799526956 45.227 0.75996 45.227 44.818 45.578 0 280 67 6 0 0 0 0.0071702 2 24290 84.097 84.097 1 0.80244 0.88566 0 56523000 29174000 27350000 6107 2023;1687 2307 2371 9521;9522 9522 DTLFCYHK 8 1 0 Unmodified _DTLFCYHK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.2513 2 542.250034 1082.48552 81200.43 0.74716 0.00040515 0.55484 0.00030086 1.302 0.00070601 542.250290888745 546.257450753133 44.238 0.60482 44.238 43.918 44.523 0 228 54 6 0 0 0 0.0072822 1 24081 83.614 83.614 1 0.8989 1.0193 0 138820000 76602000 62216000 6108 2023;1687 2307 2371 9523 9523 DTLFCYHK 8 1 0 Unmodified _DTLFCYHK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.2578 2 542.250034 1082.48552 82044.56 0.31034 0.00016828 0.76762 0.00041624 1.078 0.00058452 542.250458286513 546.257235187802 51.681 0.98362 51.681 51.186 52.17 0 302 79 7 0 0 0 0.0090389 1 25480 76.035 70.376 1 1.5045 1.1917 0 18564000 7678400 10885000 6109 2023;1687 2307 2371 9524 9524 DTLGLFLR 8 0 1 Unmodified _DTLGLFLR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.7712 2 467.77146 933.528367 89805.84 0.18129 8.48E-05 0.41031 0.00019193 0.5916 0.00027673 467.771410847309 472.775905300969 109.81 0.77235 109.81 109.35 110.12 -7.6294E-06 236 57 6 0 0 0 0.016916 1 68544 60.788 19.286 1 0.95174 0.97337 0 26396000 14681000 11715000 6110 1411 2308 2372 9525 9525 DTLGLFLR 8 0 1 Unmodified _DTLGLFLR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.7712 2 467.77146 933.528367 90397.56 0.41488 0.00019407 0.12656 5.9201E-05 0.54144 0.00025327 467.771267484713 472.775712996413 109.16 0.71955 109.16 108.75 109.47 0 229 52 6 0 0 0 0.0088507 2 69780 76.847 24.163 1 0.9378 1.0137 0 26844000 13606000 13238000 6111 1411 2308 2372 9526;9527 9527 DTLLSPDSSFEYVPPK 16 1 0 Unmodified _DTLLSPDSSFEYVPPK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.9513 2 897.94345 1793.87235 NaN NaN NaN 1.8932 0.0017 NaN NaN NaN NaN 106.97 0.34592 106.97 106.82 107.16 0 0 0 0 0.011597 1 68272 46.352 37.942 1 NaN NaN 0 4999900 0 4999900 6112 1803 2309 2373 9528 9528 DTLVADNLDQATR 13 0 1 Unmodified _DTLVADNLDQATR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.3581 2 716.357345 1430.70014 71492.72 0.70731 0.00050669 0.11979 8.5811E-05 0.8271 0.0005925 716.357499862961 721.361489383911 69.317 0.81892 69.317 68.987 69.806 0 499 69 10 0 0 0 4.3323E-07 2 40139 134.3 115.99 1 0.87849 1.0404 0 414040000 227590000 186450000 6113 2070 2310 2374 9529;9530 9530 DTLVADNLDQATR 13 0 1 Unmodified _DTLVADNLDQATR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.3585 2 716.357345 1430.70014 70932.34 0.78075 0.0005593 -0.025699 -1.841E-05 0.75505 0.00054089 716.357372503631 721.36140963683 68.287 0.70349 68.287 67.991 68.694 -7.6294E-06 429 56 10 0 0 0 2.0237E-06 2 40415 140.09 115.87 1 0.84781 0.98856 0 485420000 273020000 212400000 6114 2070 2310 2374 9531;9532 9532 DTLVADNLDQATR 13 0 1 Unmodified _DTLVADNLDQATR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 716.3576 2 716.357345 1430.70014 71554.41 0.68456 0.00049039 0.0073216 5.2449E-06 0.69188 0.00049563 716.357620378286 721.361400224586 78.984 1.5051 78.984 78.57 80.075 0 519 90 11 0 0 0 9.9313E-05 3 42341 120.32 99.616 1 1.7446 1.508 0 107580000 41389000 66194000 6115 2070 2310 2374 9533;9534;9535 9534 DTLVADNLDQATR 13 0 1 Unmodified _DTLVADNLDQATR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.362 2 716.357345 1430.70014 70953.17 0.58 0.00041548 0.2353 0.00016856 0.8153 0.00058405 716.35780698909 721.361568221064 79.35 1.5266 79.35 78.95 80.476 -7.6294E-06 541 90 10 0 0 0 9.961E-05 4 42196 92.611 73.654 1 1.646 1.4367 0 88917000 32176000 56742000 6116 2070 2310 2374 9536;9537;9538;9539 9538 DTLYEAVR 8 0 1 Unmodified _DTLYEAVR_ 0 0 0 P62906 P62906 P62906 RPL10A 60S ribosomal protein L10a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.7483 2 483.748182 965.481811 85834.76 0.24673 0.00011935 0.51567 0.00024946 0.7624 0.00036881 483.748403420037 488.752397580795 51.615 1.3698 51.615 51.21 52.58 0 556 113 8 0 0 0 5.1851E-09 2 28600 157.99 71.903 1 0.95579 1.1324 0 460680000 236150000 224530000 6117 1651 2311 2375 9540;9541 9541 DTLYEAVR 8 0 1 Unmodified _DTLYEAVR_ 0 0 0 P62906 P62906 P62906 RPL10A 60S ribosomal protein L10a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.7523 2 483.748182 965.481811 85382.28 0.39057 0.00018894 -0.17336 -8.3863E-05 0.21721 0.00010507 483.748118009477 488.752043485334 50.408 0.96297 50.408 50.104 51.067 -3.8147E-06 454 86 8 0 0 0 0.0011347 2 28457 111.82 38.072 1 0.96499 1.129 0 636400000 300860000 335540000 6118 1651 2311 2375 9542;9543 9542 DTLYEAVR 8 0 1 Unmodified _DTLYEAVR_ 0 0 0 P62906 P62906 P62906 RPL10A 60S ribosomal protein L10a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.7526 2 483.748182 965.481811 87156.49 0.063982 3.0951E-05 0.23861 0.00011543 0.30259 0.00014638 483.748270488161 488.752236287873 59.065 1.302 59.065 58.689 59.991 0 458 99 8 0 0 0 0.0092348 2 30014 75.189 24.558 1 1.0235 0.86244 0 28233000 14408000 13825000 6119 1651 2311 2375 9544;9545 9544 DTLYEAVR 8 0 1 Unmodified _DTLYEAVR_ 0 0 0 P62906 P62906 P62906 RPL10A 60S ribosomal protein L10a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.7523 2 483.748182 965.481811 85951.45 0.21647 0.00010472 0.1599 7.7349E-05 0.37637 0.00018207 483.748211134677 488.752261827566 59.578 1.0863 59.578 59.196 60.282 -3.8147E-06 462 83 8 0 0 0 0.0050709 2 29701 91.626 28.909 1 1.0398 0.89984 0 23316000 10876000 12440000 6120 1651 2311 2375 9546;9547 9546 DTMSDLPEVR 10 0 1 Oxidation (M) _DTM(ox)SDLPEVR_ DTM(1)SDLPEVR DTM(93.6)SDLPEVR 0 1 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.7781 2 589.771528 1177.5285 79050.33 0.90676 0.00053478 0.30493 0.00017984 1.2117 0.00071462 589.771368641945 594.775710832795 48.531 0.46003 48.531 48.288 48.748 0 119 32 5 0 0 0 0.00010387 1 27104 93.598 82.888 1 0.76564 0.76978 0 19257000 10722000 8535800 6121 222 2312 2376 9548 9548 164 DTNGENIAESLVAEGLATR 19 0 1 Unmodified _DTNGENIAESLVAEGLATR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.4844 2 980.484533 1958.95451 60992.82 0.42882 0.00042045 0.25938 0.00025432 0.6882 0.00067477 980.484503392786 985.488912739115 119.65 0.54907 119.65 119.41 119.96 0 194 32 8 0 0 0 3.4875E-06 2 76948 83.692 83.692 1 1.5334 1.5639 0 26922000 10248000 16674000 6122 618 2313 2377 9549;9550 9550 DTNGENIAESLVAEGLATR 19 0 1 Unmodified _DTNGENIAESLVAEGLATR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 980.4849 2 980.484533 1958.95451 60569.01 0.52988 0.00051954 0.26565 0.00026046 0.79553 0.00078 980.484893112757 985.990387874752 119.26 0.46833 119.26 119.04 119.51 -7.6294E-06 195 32 8 0 0 0 2.0713E-05 2 78503 73.91 70.782 1 1.505 1.649 0 31248000 12889000 18359000 6123 618 2313 2377 9551;9552 9552 DTNGENIAESLVAEGLATR 19 0 1 Unmodified _DTNGENIAESLVAEGLATR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 985.4866 2 980.484533 1958.95451 58729.34 0.52716 0.00051688 0.3614 0.00035434 0.88856 0.00087122 980.484635216175 985.489922281649 132.16 0.60802 132.16 131.79 132.4 0 160 28 8 0 0 0 0.011767 2 80357 37.657 37.657 1 0.73961 0.63363 0 6082500 3439900 2642700 6124 618 2313 2377 9553;9554 9554 DTPDEPWAFPAR 12 0 1 Unmodified _DTPDEPWAFPAR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3298 2 701.325316 1400.63608 73800.69 0.76332 0.00053534 -0.90361 -0.00063372 -0.14029 -9.8386E-05 701.324733176782 706.328930184916 93.592 0.84563 93.592 93.112 93.958 0 310 72 7 0 0 0 0.00021365 2 56816 81.525 77.059 1 1.4414 1.5009 0 21790000 8723500 13066000 6125 618 2314 2378 9555;9556 9555 DTPDEPWAFPAR 12 0 1 Unmodified _DTPDEPWAFPAR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3263 2 701.325316 1400.63608 74500.35 0.75885 0.0005322 -0.88017 -0.00061729 -0.12133 -8.5089E-05 701.325120508807 706.328706254507 92.86 0.7161 92.86 92.476 93.192 0 270 60 7 0 0 0 0.00080595 2 57485 65.535 59.215 1 1.2517 1.2954 0 21744000 10135000 11609000 6126 618 2314 2378 9557;9558 9557 DTPEGLQWVQLSAEEIPSR 19 0 1 Unmodified _DTPEGLQWVQLSAEEIPSR_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1083.0439 2 1078.03693 2154.05931 59370.05 0.666 0.00071797 0.29875 0.00032207 0.96475 0.00104 1078.53822598963 1083.04138944056 132.7 0.3942 132.7 132.49 132.89 0 85 16 7 0 0 0 0.028721 1 80664 22.911 22.911 1 2.088 1.7584 0 4603200 1340100 3263100 6127 1260 2315 2379 9559 9559 DTPEGLQWVQLSAEEIPSR 19 0 1 Unmodified _DTPEGLQWVQLSAEEIPSR_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1083.5454 2 1078.03693 2154.05931 60337.73 0.69334 0.00074744 0.20055 0.0002162 0.89388 0.00096364 1078.53789688958 1083.5423264029 132.53 0.39989 132.53 132.3 132.7 0 81 16 7 0 0 0 3.9793E-05 1 79656 50.806 50.806 1 2.125 1.8143 0 4529000 1391900 3137000 6128 1260 2315 2379 9560 9560 DTPITHISFHPK 12 1 0 Unmodified _DTPITHISFHPK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;A0A0J9YWK2 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.5851 3 464.91386 1391.71975 89082.05 0.32127 0.00014936 0.28542 0.0001327 0.6067 0.00028206 464.914236591319 467.585246501237 58.137 0.68051 58.137 57.694 58.375 0 193 54 7 0 0 0 0.00027377 2 32895 64.55 64.55 1 0.87324 0.94326 0 36800000 17675000 19125000 6129 1955 2316 2380 9561;9562 9561 DTPITHISFHPK 12 1 0 Unmodified _DTPITHISFHPK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;A0A0J9YWK2 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.5852 3 464.91386 1391.71975 88682.42 0.095359 4.4334E-05 0.15865 7.3758E-05 0.25401 0.00011809 464.914004401771 467.585108116668 56.411 0.50673 56.411 56.069 56.576 0 153 37 6 0 0 0 0.00020255 2 32409 56.122 52.465 1 0.94869 1.0052 0 35848000 20538000 15311000 6130 1955 2316 2380 9563;9564 9563 DTPITHISFHPK 12 1 0 Unmodified _DTPITHISFHPK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;A0A0J9YWK2 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.914 3 464.91386 1391.71975 89111.73 0.37475 0.00017423 -0.17298 -8.0419E-05 0.20177 9.3807E-05 464.913788152084 467.585042485908 66.62 0.62952 66.62 66.309 66.938 0 182 35 7 0 0 0 0.02435 2 34721 36.679 36.679 1 1.3737 1.0839 0 5957900 2483200 3474700 6131 1955 2316 2380 9565;9566 9566 DTPITHISFHPK 12 1 0 Unmodified _DTPITHISFHPK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;A0A0J9YWK2 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.9198 3 464.91386 1391.71975 89480.42 0.13058 6.071E-05 -0.082103 -3.8171E-05 0.04848 2.2539E-05 464.913958111131 467.585126167102 66.779 0.59865 66.779 66.487 67.086 0 183 35 7 0 0 0 0.041985 1 33799 15.941 15.941 1 1.3481 1.1019 0 4758100 1677100 3081100 6132 1955 2316 2380 9567 9567 DTPLYTDNTANGIALLWAPR 20 0 1 Unmodified _DTPLYTDNTANGIALLWAPR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1101.5634 2 1101.56312 2201.11168 59207.99 0.33418 0.00036812 -0.38214 -0.00042095 -0.047958 -5.2828E-05 1101.56264719336 1107.06908529562 128.2 0.54314 128.2 127.94 128.48 0 126 34 7 0 0 0 2.1974E-06 3 83552 68.809 68.809 1 0.44712 0.44836 0 9102600 6302300 2800400 6133 1854 2317 2381 9568;9569;9570 9569 DTQSVSAIGEEK 12 1 0 Unmodified _DTQSVSAIGEEK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;C9JAA9;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.8163 2 632.306789 1262.59903 74410.07 0.47034 0.0002974 -0.37928 -0.00023982 0.09106 5.7578E-05 632.305728792933 636.314033729957 32.977 0.72074 32.977 32.595 33.316 0 256 70 6 0 0 0 1.4823E-22 6 16407 153.12 111.01 1 0.87876 0.88263 0 26946000 17426000 9519600 6134 214 2318 2382 9571;9572;9573;9574;9575;9576 9575 DTQSVSAIGEEK 12 1 0 Unmodified _DTQSVSAIGEEK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;C9JAA9;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3141 2 632.306789 1262.59903 74577.24 0.77614 0.00049076 -0.47509 -0.0003004 0.30105 0.00019035 632.305727480288 636.313682682781 32.484 0.795 32.484 32.049 32.844 0 286 74 5 0 0 0 0.00022137 2 15989 88.681 53.385 1 0.95093 0.98256 0 24984000 12155000 12828000 6135 214 2318 2382 9577;9578 9578 DTQSVSAIGEEK 12 1 0 Unmodified _DTQSVSAIGEEK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;C9JAA9;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3063 2 632.306789 1262.59903 74525.41 0.49817 0.00031499 -0.15108 -9.5531E-05 0.34708 0.00021946 632.306094342998 636.313906436176 37.886 0.83956 37.886 37.368 38.208 0 361 67 7 0 0 0 0.037464 1 16955 34.695 24.463 1 1.1431 0.91457 0 7136300 2933500 4202800 6136 214 2318 2382 9579 9579 DTQSVSAIGEEK 12 1 0 Unmodified _DTQSVSAIGEEK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;C9JAA9;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.314 2 632.306789 1262.59903 73696.59 0.3889 0.0002459 0.052542 3.3223E-05 0.44144 0.00027912 632.30641632657 636.313854016609 38.003 1.0202 38.003 37.419 38.44 0 383 80 7 0 0 0 0.0033141 1 16568 56.359 33.619 1 1.3007 1.0592 0 6815900 3003200 3812700 6137 214 2318 2382 9580 9580 DTQTSITDSCAVYR 14 0 1 Unmodified _DTQTSITDSCAVYR_ 0 0 0 Q549N5;Q9Y5M8 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 808.868 2 808.864676 1615.7148 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.496 1 54.496 53.996 54.996 0 0 0 0 0.00017254 1 30652 90.653 79.845 1 6138 1794 2319 2383 9581 9581 DTQTSITDSCAVYR 14 0 1 Unmodified _DTQTSITDSCAVYR_ 0 0 0 Q549N5;Q9Y5M8 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.8692 2 808.864676 1615.7148 NaN NaN NaN 0.81224 0.00065699 NaN NaN NaN NaN 53.844 0.24266 53.844 53.678 53.921 0 0 0 0 4.2743E-42 1 30698 160.67 135.84 1 NaN NaN 0 5024700 0 5024700 6139 1794 2319 2383 9582 9582 DTQTSITDSCAVYR 14 0 1 Unmodified _DTQTSITDSCAVYR_ 0 0 0 Q549N5;Q9Y5M8 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.3658 2 808.864676 1615.7148 70112.4 0.30567 0.00024725 0.38522 0.00031159 0.6909 0.00055884 808.864805323865 813.869362356268 63.503 0.37957 63.503 63.375 63.754 0 108 33 4 0 0 0 0.0012489 1 32654 55.04 45.385 1 1.0205 0.88428 0 2009400 961970 1047400 6140 1794 2319 2383 9583 9583 DTQTSITDSCAVYR 14 0 1 Unmodified _DTQTSITDSCAVYR_ 0 0 0 Q549N5;Q9Y5M8 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 813.8707 2 808.864676 1615.7148 72713.88 0.32138 0.00025995 0.49558 0.00040086 0.81696 0.00066081 808.864544621692 813.869610488171 64.308 0.43376 64.308 64.098 64.531 0 134 36 5 0 0 0 0.032814 1 32388 30.331 27.382 1 1.0273 0.88926 0 1622300 748430 873880 6141 1794 2319 2383 9584 9584 DTSASAVAVGLK 12 1 0 Unmodified _DTSASAVAVGLK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.8068 2 559.806228 1117.5979 79841.08 0.3848 0.00021541 0.21365 0.0001196 0.59844 0.00033501 559.806342316075 563.813227360484 58.543 0.81507 58.543 58.059 58.874 -3.8147E-06 306 66 8 0 0 0 0.00021968 1 33237 82.749 82.749 1 0.88779 0.87817 0 25741000 12533000 13208000 6142 1228 2320 2384 9585 9585 DTSASAVAVGLK 12 1 0 Unmodified _DTSASAVAVGLK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.8135 2 559.806228 1117.5979 80227.13 0.64528 0.00036123 0.14815 8.2937E-05 0.79343 0.00044417 559.806616204969 563.813241686981 57.58 0.90966 57.58 57.289 58.198 0 313 74 8 0 0 0 9.8015E-06 2 33354 108.15 77.554 1 0.76518 0.8402 0 41623000 20371000 21252000 6143 1228 2320 2384 9586;9587 9587 DTSASAVAVGLK 12 1 0 Unmodified _DTSASAVAVGLK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.8137 2 559.806228 1117.5979 80867.52 0.59553 0.00033338 -0.65637 -0.00036744 -0.060838 -3.4057E-05 559.806094651304 563.812792104122 67.208 0.80819 67.208 66.8 67.608 0 198 58 5 0 0 0 0.00020953 1 34974 80.688 73.043 1 1.1982 0.93591 0 3258500 1458600 1799900 6144 1228 2320 2384 9588 9588 DTSASAVAVGLK 12 1 0 Unmodified _DTSASAVAVGLK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.8132 2 559.806228 1117.5979 81617.05 0.48738 0.00027284 -0.11727 -6.5649E-05 0.37011 0.00020719 559.805987920239 563.812991260635 67.806 0.66171 67.806 67.498 68.16 0 213 47 7 0 0 0 0.00039567 1 34499 71.614 63.968 1 1.1185 0.90656 0 2725300 1390500 1334800 6145 1228 2320 2384 9589 9589 DTSATTALELVAGER 15 0 1 Unmodified _DTSATTALELVAGER_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.3923 2 767.391384 1532.76822 69239.08 0.70294 0.00053943 -0.026021 -1.9968E-05 0.67691 0.00051946 767.391482648416 772.395247000381 105.48 1.1035 105.48 105.12 106.22 0 550 83 10 0 0 0 1.9452E-07 3 65733 108.72 108.72 1 0.83429 0.98737 0 343460000 184330000 159140000 6146 69 2321 2385 9590;9591;9592 9592 DTSATTALELVAGER 15 0 1 Unmodified _DTSATTALELVAGER_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.3959 2 767.391384 1532.76822 68956.83 0.79545 0.00061042 0.15464 0.00011867 0.95009 0.00072909 767.391579680425 772.395399351646 105.04 1.1726 105.04 104.55 105.72 0 575 88 10 0 0 0 4.7539E-07 3 66507 102.97 102.97 1 0.83575 0.96844 0 293470000 160310000 133160000 6147 69 2321 2385 9593;9594;9595 9594 DTSATTALELVAGER 15 0 1 Unmodified _DTSATTALELVAGER_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.3931 2 767.391384 1532.76822 69073.18 0.56541 0.00043389 -0.33452 -0.00025671 0.23089 0.00017718 767.391622750117 772.395383974824 117.22 1.8949 117.22 116.69 118.59 0 389 80 11 0 0 0 0.00022578 3 68826 72.705 66.464 1 1.6833 1.4567 0 129810000 48780000 81029000 6148 69 2321 2385 9596;9597;9598 9596 DTSATTALELVAGER 15 0 1 Unmodified _DTSATTALELVAGER_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.3958 2 767.391384 1532.76822 68730.61 0.77794 0.00059698 0.033208 2.5483E-05 0.81114 0.00062247 767.391632463948 772.395322615512 117.07 1.6537 117.07 116.72 118.38 0 417 76 11 0 0 0 4.4304E-10 3 67915 113.77 107.53 1 1.6998 1.4841 0 127070000 44342000 82725000 6149 69 2321 2385 9599;9600;9601 9600 DTSEDIEELVEPVAAHGPK 19 1 0 Unmodified _DTSEDIEELVEPVAAHGPK_ 0 0 0 B2R6D0;A0A087WW66;Q99460 B2R6D0 B2R6D0 PSMD1 26S proteasome non-ATPase regulatory subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.0037 3 679.332136 2034.97458 NaN NaN NaN -0.16181 -0.00010992 NaN NaN NaN NaN 104.84 0.40512 104.84 104.65 105.06 0 0 0 0 0.031201 1 64913 26.412 21.202 1 NaN NaN 0 6516500 0 6516500 6150 424 2322 2386 9602 9602 DTSEDIEELVEPVAAHGPK 19 1 0 Unmodified _DTSEDIEELVEPVAAHGPK_ 0 0 0 B2R6D0;A0A087WW66;Q99460 B2R6D0 B2R6D0 PSMD1 26S proteasome non-ATPase regulatory subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.3369 3 679.332136 2034.97458 73808.52 0.64277 0.00043665 -0.27818 -0.00018898 0.36459 0.00024768 679.331022229194 682.337516287614 104.2 0.4187 104.2 103.95 104.37 -7.6294E-06 71 34 4 0 0 0 0.002562 1 65920 28.14 23.701 1 2.7785 2.8853 0 11198000 3705800 7492300 6151 424 2322 2386 9603 9603 DTSFLGSDDIGNIDVR 16 0 1 Unmodified _DTSFLGSDDIGNIDVR_ 0 0 0 P49792;D3DX73 P49792 P49792 RANBP2;hCG_1994636 E3 SUMO-protein ligase RanBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.9133 2 862.410305 1722.80606 62653.1 1.2871 0.00111 0.76504 0.00065978 2.0521 0.0017698 862.91112997697 868.419449532954 108.49 0.36076 108.49 108.33 108.69 0 100 27 7 0 0 0 4.1894E-05 1 67740 84.289 74.285 1 1.1021 1.1522 0 13127000 6064300 7062500 6152 1588 2323 2387 9604 9604 DTSFLGSDDIGNIDVR 16 0 1 Unmodified _DTSFLGSDDIGNIDVR_ 0 0 0 P49792;D3DX73 P49792 P49792 RANBP2;hCG_1994636 E3 SUMO-protein ligase RanBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.9137 2 862.410305 1722.80606 65358.57 0.70684 0.00060959 -0.075661 -6.5251E-05 0.63118 0.00054434 862.410563663364 867.413727292956 108.02 0.39375 108.02 107.87 108.27 7.6294E-06 94 28 5 0 0 0 8.534E-05 3 69001 80.69 70.686 1 1.3268 1.3201 0 8194700 2908300 5286400 6153 1588 2323 2387 9605;9606;9607 9605 DTSSDPLLELR 11 0 1 Unmodified _DTSSDPLLELR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.3213 2 623.319699 1244.62485 77696.17 0.78429 0.00048887 -0.40191 -0.00025052 0.38239 0.00023835 623.318782041825 628.323856458335 95.516 1.1939 95.516 95.082 96.275 0 463 98 7 0 0 0 2.9761E-08 3 58118 120.68 91.266 1 0.85544 0.948 0 64729000 33106000 31623000 6154 1859 2324 2388 9608;9609;9610 9609 DTSSDPLLELR 11 0 1 Unmodified _DTSSDPLLELR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.3204 2 623.319699 1244.62485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.269 1 95.269 94.769 95.769 0 0 0 0 0.047667 1 59303 43.77 26.539 1 6155 1859 2324 2388 9611 9611 DTSSDPLLELR 11 0 1 Unmodified _DTSSDPLLELR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.3248 2 623.319699 1244.62485 77015.25 0.71772 0.00044737 -0.071955 -4.4851E-05 0.64576 0.00040252 623.319325623176 628.323852692552 108.36 0.89476 108.36 108.01 108.9 0 251 44 8 0 0 0 0.0004486 1 62118 77.662 54.922 1 1.1772 0.96254 0 16066000 7120100 8946100 6156 1859 2324 2388 9612 9612 DTSSDPLLELR 11 0 1 Unmodified _DTSSDPLLELR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.3198 2 623.319699 1244.62485 77936.98 0.58991 0.0003677 -0.14635 -9.1226E-05 0.44355 0.00027648 623.319342217965 628.323822855044 108.34 1.0488 108.34 107.74 108.79 0 224 52 8 0 0 0 0.0014119 2 61450 67.704 44.964 1 1.2314 1.0255 0 15727000 6522300 9204300 6157 1859 2324 2388 9613;9614 9614 DTSVEGSEMVPGK 13 1 0 Oxidation (M) _DTSVEGSEM(ox)VPGK_ DTSVEGSEM(1)VPGK DTSVEGSEM(142)VPGK 0 1 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.3078 2 676.305932 1350.59731 73269.08 0.49263 0.00033317 -0.15521 -0.00010497 0.33742 0.0002282 676.30591506642 680.312674621445 28.442 0.39063 28.442 28.278 28.669 1.9073E-06 124 25 8 0 0 0 4.827E-19 2 13351 142 133.77 1 0.84492 0.92021 0 49363000 25392000 23971000 6158 550 2325 2389 9615;9616 9615 403 DTSVEGSEMVPGK 13 1 0 Oxidation (M) _DTSVEGSEM(ox)VPGK_ DTSVEGSEM(1)VPGK DTSVEGSEM(162.36)VPGK 0 1 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.3127 2 676.305932 1350.59731 73015.3 0.51257 0.00034665 -0.11229 -7.5945E-05 0.40028 0.00027071 676.305945798091 680.312857653119 27.858 0.36148 27.858 27.649 28.01 0 117 20 9 0 0 0 7.3487E-25 3 13047 162.36 159.22 1 0.88124 0.99445 0 65767000 35804000 29962000 6159 550 2325 2389 9617;9618;9619 9618 403 DTSVEGSEMVPGK 13 1 0 Oxidation (M) _DTSVEGSEM(ox)VPGK_ DTSVEGSEM(1)VPGK DTSVEGSEM(113.46)VPGK 0 1 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.3127 2 676.305932 1350.59731 73770.24 0.34889 0.00023596 -0.014972 -1.0126E-05 0.33392 0.00022583 676.306042266538 680.312540980205 32.374 0.3858 32.374 32.23 32.616 0 91 17 7 0 0 0 5.6167E-09 1 13938 113.46 110.93 1 0.59595 0.46371 0 3695400 2190600 1504800 6160 550 2325 2389 9620 9620 403 DTSVEGSEMVPGK 13 1 0 Oxidation (M) _DTSVEGSEM(ox)VPGK_ DTSVEGSEM(1)VPGK DTSVEGSEM(80.76)VPGK 0 1 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 676.3071 2 676.305932 1350.59731 73440.59 0.55296 0.00037397 -0.31027 -0.00020983 0.24269 0.00016414 676.305787233019 680.31267987018 32.663 0.33603 32.663 32.485 32.821 0 84 15 8 0 0 0 6.5561E-05 2 13609 80.763 76.465 1 0.55281 0.45347 0 5121400 3430900 1690500 6161 550 2325 2389 9621;9622 9621 403 DTTEVPSSTVEK 12 1 0 Unmodified _DTTEVPSSTVEK_ 0 0 0 A0A024R784;O15164;B4DYZ9;Q6ZSA6 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.8175 2 646.814447 1291.61434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.598 1 31.598 31.098 32.098 0 0 0 0 0.0072615 1 15603 60.754 39.782 1 6162 217 2326 2390 9623 9623 DTTIMELR 8 0 1 Oxidation (M) _DTTIM(ox)ELR_ DTTIM(1)ELR DTTIM(42.6)ELR 0 1 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.7469 2 497.747324 993.480096 83159.05 0.54903 0.00027328 -0.6088 -0.00030303 -0.059768 -2.975E-05 497.746909130964 503.253717636665 43.267 0.93983 43.267 42.943 43.883 0 219 75 4 0 0 0 0.025751 2 23442 42.599 42.599 1 2.1478 2.3488 0 34947000 11435000 23512000 6163 672 2327 2391 9624;9625 9625 520 DTVILPIK 8 1 0 Unmodified _DTVILPIK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.7902 2 449.784036 897.553519 NaN NaN NaN -0.8476 -0.00038124 NaN NaN NaN NaN 89.215 0.41234 89.215 89.086 89.498 0 0 0 0 0.013636 1 53852 71.715 55.561 1 NaN NaN 0 5864800 0 5864800 6164 1920 2328 2392 9626 9626 DTVILPIK 8 1 0 Unmodified _DTVILPIK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 449.579 2 449.784036 897.553519 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.234 1 89.234 88.734 89.734 0 0 0 0 0.034402 1 53866 60.788 38.498 1 6165 1920 2328 2392 9627 9627 DTVILPIK 8 1 0 Unmodified _DTVILPIK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.7909 2 449.784036 897.553519 NaN NaN NaN -0.20656 -9.2909E-05 NaN NaN NaN NaN 88.288 0.40529 88.288 88.085 88.491 0 0 0 0 0.0064355 2 54438 85.359 70.695 1 NaN NaN 0 7287500 0 7287500 6166 1920 2328 2392 9628;9629 9629 DTVTISGPQAPVFEFVEQLRK 21 1 1 Unmodified _DTVTISGPQAPVFEFVEQLRK_ 0 0 1 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.7613 3 787.753147 2360.23761 71099.55 1.0264 0.00080851 -0.22931 -0.00018064 0.79704 0.00062787 788.087524185605 794.094690408093 126.89 0.77611 126.89 126.45 127.22 0 142 48 4 0 0 0 3.9521E-07 2 84629 49.528 49.528 1 1.9354 2.1649 0 11941000 3655800 8285200 6167 587 2329 2393 9630;9631 9630 DTWGVVSSGSSK 12 1 0 Unmodified _DTWGVVSSGSSK_ 0 0 0 C0JYZ2;D3DPG0;A0A0A0MTS7;Q8WZ42;D3DPF9;A0A0A0MRA3 C0JYZ2 C0JYZ2 TTN Titin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.2987 2 605.290942 1208.56733 77459.93 0.55904 0.00033838 0.13956 8.4473E-05 0.6986 0.00042286 605.290847088173 609.2979669823 35.106 0.62134 35.106 34.791 35.412 0 291 56 7 0 0 0 0.014655 2 17565 43.442 3.5937 1 0.8495 0.9188 0 42992000 22096000 20895000 6168 489 2330 2394 9632;9633 9633 DTWGVVSSGSSK 12 1 0 Unmodified _DTWGVVSSGSSK_ 0 0 0 C0JYZ2;D3DPG0;A0A0A0MTS7;Q8WZ42;D3DPF9;A0A0A0MRA3 C0JYZ2 C0JYZ2 TTN Titin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.291 2 605.290942 1208.56733 76284.71 0.97686 0.00059129 0.69308 0.00041951 1.6699 0.0010108 605.291267379064 609.297866702224 34.352 0.52764 34.352 34.072 34.599 0 199 38 10 0 0 0 0.0021406 1 17347 59.35 4.286 1 0.9005 1.0102 0 77718000 42685000 35033000 6169 489 2330 2394 9634 9634 DTWGVVSSGSSK 12 1 0 Unmodified _DTWGVVSSGSSK_ 0 0 0 C0JYZ2;D3DPG0;A0A0A0MTS7;Q8WZ42;D3DPF9;A0A0A0MRA3 C0JYZ2 C0JYZ2 TTN Titin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.2998 2 605.290942 1208.56733 NaN NaN NaN 2.5434 0.0015395 NaN NaN NaN NaN 40.222 0.31266 40.222 39.993 40.305 0 0 0 0 0.03913 1 21445 44.203 10.242 1 NaN NaN 0 9073100 0 9073100 6170 489 2330 2394 9635 9635 DTYDTSIDSLEENLDK 16 1 0 Unmodified _DTYDTSIDSLEENLDK_ 0 0 0 A0A1B0GUH9;A0A1P0AZG4;A0PJI9 A0A1B0GUH9 A0A1B0GUH9 C10orf12 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 933.4227 2 929.41545 1856.81635 NaN NaN NaN -0.8535 -0.00079326 NaN NaN NaN NaN 115.5 0.38533 115.5 115.27 115.66 0 0 0 0 0.0035071 1 67684 56.139 50.294 1 NaN NaN 0 1403600 0 1403600 6171 630 2331 2395 9636 9636 DTYEETGLQGHPSQFSGR 18 0 1 Unmodified _DTYEETGLQGHPSQFSGR_ 0 0 0 X6RLL4;A0A087X1N3;O75818 X6RLL4 X6RLL4 RPP40 Ribonuclease P protein subunit p40 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1009.9594 2 1004.9534 2007.89225 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.794 1 46.794 46.294 47.294 0 0 0 0 0.0060578 1 25897 48.177 39.873 1 6172 449 2332 2396 9637 9637 DTYLDTQVVGQTGVIR 16 0 1 Unmodified _DTYLDTQVVGQTGVIR_ 0 0 0 B4E0Q4;B4DZJ7;O00267;B4DJK4 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.9659 2 882.959965 1763.90538 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.673 1 97.673 97.173 98.173 0 0 0 0 0.00091716 1 59606 64.55 49.578 1 6173 1056 2333 2397 9638 9638 DVACGANHTLVLDSQK 16 1 0 Unmodified _DVACGANHTLVLDSQK_ 0 0 0 A5PLK7;A0A024RAC5;Q9P258 A5PLK7 A5PLK7 RCC2 Protein RCC2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.4283 2 864.422693 1726.83083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.576 1 48.576 48.076 49.076 0 0 0 0 0.0088297 1 26502 47.189 14.691 1 6174 301 2334 2398 9639 9639 DVACGANHTLVLDSQK 16 1 0 Unmodified _DVACGANHTLVLDSQK_ 0 0 0 A5PLK7;A0A024RAC5;Q9P258 A5PLK7 A5PLK7 RCC2 Protein RCC2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 864.4236 2 864.422693 1726.83083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.331 1 47.331 46.831 47.831 3.8147E-06 0 0 0 0.00094414 1 26277 71.548 24.842 1 6175 301 2334 2398 9640 9640 DVAEEIANYRPTLDTLHEQASALPQEHAESPDVR 34 0 2 Unmodified _DVAEEIANYRPTLDTLHEQASALPQEHAESPDVR_ 0 0 1 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 956.2177 4 951.21332 3800.82417 NaN NaN NaN -0.019954 -1.898E-05 NaN NaN NaN NaN 112.7 0.33656 112.7 112.58 112.91 0 0 0 0 1.7809E-07 1 64652 42.865 38.506 1 NaN NaN 0 3910900 0 3910900 6176 415 2335 2399 9641 9641 DVAENAGLFIDFVQR 15 0 1 Unmodified _DVAENAGLFIDFVQR_ 0 0 0 Q7Z3K3;B4DSK8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.9333 2 847.430844 1692.84713 68773.49 1.0988 0.00093119 -0.29112 -0.00024671 0.80772 0.00068448 847.931856631586 852.936011685824 125.29 0.51248 125.29 125.05 125.57 0 120 33 5 0 0 0 0.00022474 2 81369 90.614 90.614 1 0.66738 0.68028 0 6880200 3913700 2966500 6177 1874 2336 2400 9642;9643 9642 DVAENAGLFIDFVQR 15 0 1 Unmodified _DVAENAGLFIDFVQR_ 0 0 0 Q7Z3K3;B4DSK8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.436 2 847.430844 1692.84713 66904.32 1.282 0.0010864 0.1503 0.00012737 1.4323 0.0012138 847.431062076722 852.434897086455 124.92 0.61052 124.92 124.58 125.19 7.6294E-06 134 38 5 0 0 0 0.00022422 2 83156 85.288 85.288 1 0.52119 0.52574 0 10424000 6742000 3681900 6178 1874 2336 2400 9644;9645 9645 DVAEVDTVRR 10 0 2 Unmodified _DVAEVDTVRR_ 0 0 1 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.3083 2 580.306926 1158.5993 81655.55 0.37581 0.00021808 -0.16631 -9.651E-05 0.2095 0.00012157 580.307218294051 590.314871232599 26.614 0.35105 26.614 26.436 26.787 0 77 20 6 0 0 0 0.00048764 1 11979 91.087 66.866 1 2.5229 2.7399 0 32704000 11436000 21268000 6179 1754 2337 2401 9646 9646 DVAEVDTVRR 10 0 2 Unmodified _DVAEVDTVRR_ 0 0 1 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.3077 2 580.306926 1158.5993 79904.46 0.69643 0.00040414 -0.29195 -0.00016942 0.40448 0.00023472 580.30707096758 590.3149602257 26.199 0.40193 26.199 25.987 26.389 0 87 20 6 0 0 0 3.7735E-09 1 11680 128.36 96.427 1 1.7544 2.0059 0 45782000 15585000 30197000 6180 1754 2337 2401 9647 9647 DVASEVNLTAYK 12 1 0 Unmodified _DVASEVNLTAYK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.3353 2 655.33535 1308.65615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.689 1 78.688 78.188 79.188 -7.6294E-06 0 0 0 0.010076 1 47743 57.019 36.69 1 6181 2033 2338 2402 9648 9648 DVASEVNLTAYKPK 14 2 0 Unmodified _DVASEVNLTAYKPK_ 0 0 1 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.4105 2 767.909213 1533.80387 69235.96 0.57883 0.00044449 -0.5953 -0.00045713 -0.016463 -1.2642E-05 767.909175739107 775.922412627662 82.34 0.72575 82.34 82.062 82.787 0 175 42 8 0 0 0 0.0324 1 43865 42.802 40.861 1 2.2171 1.8797 0 6334000 1735600 4598400 6182 2033 2339 2403 9649 9649 DVAVMQLR 8 0 1 Oxidation (M) _DVAVM(ox)QLR_ DVAVM(1)QLR DVAVM(49.36)QLR 0 1 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2572 2 474.252577 946.490601 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.005 1 40.005 39.505 40.505 3.8147E-06 0 0 0 0.030542 1 21288 49.358 10.567 1 6183 1607 2340 2404 9650 9650 1395 DVAYQYVK 8 1 0 Unmodified _DVAYQYVK_ 0 0 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.26 2 493.2531 984.491647 85907.98 0.47185 0.00023274 -0.72431 -0.00035727 -0.25245 -0.00012452 493.253006399145 497.260211004307 44.19 0.74941 44.19 43.828 44.577 0 303 66 6 0 0 0 0.0065286 2 24100 86.866 72.709 1 0.83431 0.93261 0 101290000 57205000 44088000 6184 666 2341 2405 9651;9652 9652 DVAYQYVK 8 1 0 Unmodified _DVAYQYVK_ 0 0 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.2535 2 493.2531 984.491647 87201.77 -0.0096016 -4.736E-06 0.44205 0.00021804 0.43245 0.00021331 493.253227045299 497.260316918219 52.2 0.70514 52.2 51.857 52.562 -3.8147E-06 196 54 6 0 0 0 0.032028 2 25149 50.898 45.418 1 0.68018 0.55777 0 5084900 3176100 1908800 6185 666 2341 2405 9653;9654 9654 DVCSHFDLNK 10 1 0 Unmodified _DVCSHFDLNK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.7809 2 617.779687 1233.54482 78939.11 0.96722 0.00059753 -0.47786 -0.00029521 0.48937 0.00030232 617.779259318342 621.786604190143 43.702 0.23948 43.702 43.575 43.814 0 58 17 6 0 0 0 7.3668E-06 1 23775 107.21 98.022 1 1.265 1.2788 0 16394000 7895700 8498000 6186 1392 2342 2406 9655 9655 DVDEAYMNK 9 1 0 Unmodified _DVDEAYMNK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.7344 2 542.734414 1083.45428 86951.93 0.47692 0.00025884 -0.044652 -2.4234E-05 0.43227 0.00023461 542.734397529307 546.741463085272 31.338 0.3381 31.338 31.11 31.448 0 74 29 4 0 0 0 0.0074668 1 15485 61.962 61.962 1 0.72752 0.73583 0 8913800 4071500 4842300 + 6187 1156 2343 2407 9656 9656 DVDEAYMNK 9 1 0 Unmodified _DVDEAYMNK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.7349 2 542.734414 1083.45428 85742.37 0.49495 0.00026862 0.0084791 4.6019E-06 0.50343 0.00027323 542.734387947538 546.741462378197 36.33 0.52409 36.33 36.059 36.584 3.8147E-06 111 47 4 0 0 0 0.063863 1 15769 35.445 35.445 1 2.3606 1.8879 0 2430300 750380 1679900 + 6188 1156 2343 2407 9657 9657 DVDFEGTDEPIFGK 14 1 0 Unmodified _DVDFEGTDEPIFGK_ 0 0 0 P42285;A8K6I4;H0Y8U3 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.8597 2 784.859386 1567.70422 68211.77 0.88976 0.00069833 0.24352 0.00019113 1.1333 0.00088946 784.859390837353 788.866850204326 100.81 0.71549 100.81 100.4 101.11 0 243 52 7 0 0 0 4.5577E-15 1 61727 136.48 136.48 1 1.0558 1.1358 0 32998000 17342000 15656000 6189 1563 2344 2408 9658 9658 DVDFEGTDEPIFGK 14 1 0 Unmodified _DVDFEGTDEPIFGK_ 0 0 0 P42285;A8K6I4;H0Y8U3 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.3615 2 784.859386 1567.70422 70481.11 0.74509 0.00058479 0.21704 0.00017034 0.96213 0.00075514 784.859385863272 788.866868820063 100.28 0.76069 100.28 99.874 100.63 0 287 62 6 0 0 0 0.0019148 1 63087 50.284 50.284 1 0.99466 1.0954 0 43031000 24564000 18467000 6190 1563 2344 2408 9659 9659 DVDFEGTDEPIFGK 14 1 0 Unmodified _DVDFEGTDEPIFGK_ 0 0 0 P42285;A8K6I4;H0Y8U3 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.8588 2 784.859386 1567.70422 68884.47 0.94143 0.00073889 -0.035391 -2.7777E-05 0.90604 0.00071111 784.859285409778 788.866560701375 112.72 0.67624 112.72 112.45 113.13 0 170 32 7 0 0 0 3.8228E-06 1 65471 101.39 101.39 1 1.1151 0.87266 0 11713000 5246400 6466700 6191 1563 2344 2408 9660 9660 DVDFEGTDEPIFGK 14 1 0 Unmodified _DVDFEGTDEPIFGK_ 0 0 0 P42285;A8K6I4;H0Y8U3 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.8605 2 784.859386 1567.70422 69195.02 0.70627 0.00055432 0.45832 0.00035972 1.1646 0.00091404 784.85952406782 788.867043813811 112.99 1.0891 112.99 112.6 113.69 0 224 52 6 0 0 0 0.00019921 1 64727 69.451 69.451 1 1.1393 0.93384 0 5356900 2303100 3053800 6192 1563 2344 2408 9661 9661 DVDFMYVELIQR 12 0 1 Oxidation (M) _DVDFM(ox)YVELIQR_ DVDFM(1)YVELIQR DVDFM(85.53)YVELIQR 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.8792 2 772.376691 1542.73883 68888.95 0.67334 0.00052007 0.23256 0.00017963 0.9059 0.0006997 772.376813329772 777.381083400644 114.54 0.47417 114.54 114.32 114.79 0 138 33 5 0 0 0 0.00011307 1 72646 85.533 68.302 1 0.8327 0.84001 0 15579000 7898100 7681300 6193 1665 2345 2409 9662 9662 1445 DVDFMYVELIQR 12 0 1 Oxidation (M) _DVDFM(ox)YVELIQR_ DVDFM(1)YVELIQR DVDFM(107.83)YVELIQR 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.378 2 772.376691 1542.73883 67770.95 0.71683 0.00055367 0.138 0.00010658 0.85483 0.00066025 772.376839655404 777.381247213297 114.11 0.53828 114.11 113.81 114.35 0 153 39 5 0 0 0 5.077E-06 3 74130 107.83 93.624 1 0.92808 0.91576 0 12882000 6867600 6014600 6194 1665 2345 2409 9663;9664;9665 9665 1445 DVDFMYVELIQR 12 0 1 Oxidation (M) _DVDFM(ox)YVELIQR_ DVDFM(1)YVELIQR DVDFM(57.35)YVELIQR 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.3749 2 772.376691 1542.73883 68764.09 0.91887 0.00070971 0.18904 0.00014601 1.1079 0.00085572 772.878484317228 777.381854132073 125.53 0.73176 125.53 125.19 125.92 0 100 28 7 0 0 0 0.0014178 1 75321 57.347 52.441 1 0.21563 0.18028 0 3600800 2922300 678560 6195 1665 2345 2409 9666 9666 1445 DVDGAYMTK 9 1 0 Unmodified _DVDGAYMTK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.226 2 500.226225 998.437897 NaN NaN NaN 0.0017045 8.5263E-07 NaN NaN NaN NaN 31.866 0.70141 31.866 31.629 32.33 0 0 0 0 0.024253 1 15780 55.549 22.709 1 NaN NaN 0 14237000 14237000 0 + 6196 1308;1309 2346 2410 9667 9667 DVDGAYMTK 9 1 0 Unmodified _DVDGAYMTK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.2263 2 500.226225 998.437897 NaN NaN NaN 0.17751 8.8795E-05 NaN NaN NaN NaN 35.998 0.5739 35.998 35.804 36.378 0 0 0 0 0.021651 1 15570 57.59 23.793 1 NaN NaN 0 10318000 10318000 0 + 6197 1308;1309 2346 2410 9668 9668 DVDGLTSINAGR 12 0 1 Unmodified _DVDGLTSINAGR_ 0 0 0 A0A024R652;P11586 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.3146 2 609.309666 1216.60478 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.834 1 64.834 64.334 65.334 0 0 0 0 0.002195 1 37290 68.557 45.129 1 6198 196 2347 2411 9669 9669 DVDGLTSINAGR 12 0 1 Unmodified _DVDGLTSINAGR_ 0 0 0 A0A024R652;P11586 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.3138 2 609.309666 1216.60478 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.853 1 63.853 63.353 64.353 3.8147E-06 0 0 0 0.00023557 1 37563 83.438 55.039 1 6199 196 2347 2411 9670 9670 DVDGVTDINLGK 12 1 0 Unmodified _DVDGVTDINLGK_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;H0Y327;Q5JYA8;Q5JYA3 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.3265 2 623.319699 1244.62485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.642 1 78.642 78.142 79.142 0 0 0 0 0.00022704 1 46576 83.869 62.421 1 6200 418 2348 2412 9671 9671 DVDIIDHHDNTYTVK 15 1 0 Unmodified _DVDIIDHHDNTYTVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.2905 3 595.619841 1783.83769 79507.39 0.50597 0.00030136 0.12054 7.1793E-05 0.6265 0.00037316 595.95476503658 598.29114133297 52.84 0.40192 52.84 52.611 53.013 0 74 32 5 0 0 0 0.00024034 2 30217 50.155 50.155 1 1.4575 1.4978 0 11689000 4276300 7412500 6201 1504 2349 2413 9672;9673 9672 DVDLTLPGWGEWGGVGLKPSAK 22 2 0 Unmodified _DVDLTLPGWGEWGGVGLKPSAK_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.7402 3 761.398704 2281.17428 72497.07 0.56689 0.00043163 1.3117 0.00099874 1.8786 0.0014304 761.734524813883 767.076164860876 122.93 0.46668 122.93 122.75 123.22 7.6294E-06 84 35 4 0 0 0 0.0016104 1 79648 28.959 28.959 1 0.38151 0.42434 0 5728600 4005400 1723200 6202 2008;393 2350 2414 9674 9674 DVDLTLPGWGEWGGVGLKPSAK 22 2 0 Unmodified _DVDLTLPGWGEWGGVGLKPSAK_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.7432 3 761.398704 2281.17428 70481.22 1.1392 0.00086738 0.28953 0.00022045 1.4287 0.0010878 762.067345529435 767.07596742868 134.23 0.30511 134.23 134.14 134.44 0 66 14 7 0 0 0 1.9303E-11 2 81000 88.396 88.396 1 1.405 1.1899 0 16177000 6608100 9568500 6203 2008;393 2350 2414 9675;9676 9675 DVDNAYMIK 9 1 0 Oxidation (M) _DVDNAYM(ox)IK_ DVDNAYM(1)IK DVDNAYM(48.79)IK 0 1 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.7543 2 542.752607 1083.49066 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.527 1 41.527 41.027 42.027 0 0 0 0 0.019767 1 22321 48.794 38.807 1 + 6204 1166 2351 2415 9677 9677 885 DVDTIFECK 9 1 0 Unmodified _DVDTIFECK_ 0 0 0 Q2TB10;A0A087WXB4;C9JHX9;C9K0M9;C9JLY3 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.7654 2 563.757889 1125.50123 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.643 1 76.643 76.143 77.143 -7.6294E-06 0 0 0 0.0028526 1 45203 80.165 63.389 1 6205 1777 2352 2416 9678 9678 DVDTIFECK 9 1 0 Unmodified _DVDTIFECK_ 0 0 0 Q2TB10;A0A087WXB4;C9JHX9;C9K0M9;C9JLY3 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.7575 2 563.757889 1125.50123 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.694 1 76.694 76.194 77.194 0 0 0 0 0.0040489 1 45240 69.423 51.438 1 6206 1777 2352 2416 9679 9679 DVDTIFECK 9 1 0 Unmodified _DVDTIFECK_ 0 0 0 Q2TB10;A0A087WXB4;C9JHX9;C9K0M9;C9JLY3 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.7654 2 563.757889 1125.50123 82198.05 0.5184 0.00029225 -0.4446 -0.00025065 0.073795 4.1602E-05 563.758171691938 567.764578543318 86.778 0.84403 86.778 86.374 87.218 0 148 49 5 0 0 0 0.042881 1 47522 40.882 24.106 1 1.9528 1.641 0 2157300 762320 1395000 6207 1777 2352 2416 9680 9680 DVDTIFECK 9 1 0 Unmodified _DVDTIFECK_ 0 0 0 Q2TB10;A0A087WXB4;C9JHX9;C9K0M9;C9JLY3 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.7653 2 563.757889 1125.50123 80683.06 0.52739 0.00029732 -0.054939 -3.0972E-05 0.47245 0.00026635 563.75846556867 567.764906838358 86.969 0.78866 86.969 86.57 87.359 -7.6294E-06 131 48 4 0 0 0 0.020055 2 46965 50.607 33.221 1 1.8381 1.5252 0 1812400 645040 1167400 6208 1777 2352 2416 9681;9682 9682 DVDTQEFNLEK 11 1 0 Unmodified _DVDTQEFNLEK_ 0 0 0 Q8NDD1;Q5TBH9;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.3217 2 669.314614 1336.61468 74806.42 0.49063 0.00032838 -0.23068 -0.0001544 0.25995 0.00017399 669.314576333482 673.321454375969 70.054 0.53387 70.054 69.795 70.329 0 249 49 8 0 0 0 2.0415E-23 1 40701 173.37 149.34 1 1.1319 1.27 0 66882000 30631000 36252000 6209 1925 2353 2417 9683 9683 DVDTQEFNLEK 11 1 0 Unmodified _DVDTQEFNLEK_ 0 0 0 Q8NDD1;Q5TBH9;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.3151 2 669.314614 1336.61468 74338.02 0.6562 0.0004392 -0.043726 -2.9266E-05 0.61247 0.00040994 669.314230686238 673.321508686934 68.895 0.69438 68.895 68.739 69.433 -7.6294E-06 279 59 8 0 0 0 2.8124E-31 2 40958 185.14 163.05 1 1.2014 1.3538 0 59846000 25824000 34022000 6210 1925 2353 2417 9684;9685 9685 DVDTQEFNLEK 11 1 0 Unmodified _DVDTQEFNLEK_ 0 0 0 Q8NDD1;Q5TBH9;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.3148 2 669.314614 1336.61468 74986.8 0.4346 0.00029088 0.45895 0.00030718 0.89355 0.00059806 669.314787348575 673.321860353563 79.99 0.81666 79.99 79.458 80.275 7.6294E-06 254 50 9 0 0 0 2.2237E-05 2 43127 104.05 91.812 1 1.3462 1.0702 0 10008000 4473000 5535300 6211 1925 2353 2417 9686;9687 9687 DVDTQEFNLEK 11 1 0 Unmodified _DVDTQEFNLEK_ 0 0 0 Q8NDD1;Q5TBH9;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.3152 2 669.314614 1336.61468 75307.15 0.51139 0.00034228 0.038376 2.5686E-05 0.54976 0.00036796 669.314552468361 673.321727286561 80.369 0.62567 80.369 80.044 80.669 0 205 38 8 0 0 0 2.2237E-05 2 42523 104.05 96.676 1 1.285 1.0586 0 10664000 4609400 6054800 6212 1925 2353 2417 9688;9689 9689 DVDTYYLSNLVK 12 1 0 Unmodified _DVDTYYLSNLVK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.1467 2 715.364107 1428.71366 76109.21 1.1714 0.00083796 0.44489 0.00031826 1.6163 0.0011562 715.364188266388 719.371371796495 110.82 0.52628 110.82 110.56 111.09 -7.6294E-06 149 34 6 0 0 0 0.0061958 1 69712 72.643 59.29 1 0.58577 0.63183 0 34343000 20122000 14221000 6213 118 2354 2418 9690 9690 DVDTYYLSNLVK 12 1 0 Unmodified _DVDTYYLSNLVK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 719.3716 2 715.364107 1428.71366 72405.45 0.91108 0.00065176 0.040745 2.9147E-05 0.95183 0.0006809 715.364277833518 719.3710953742 121.85 0.85126 121.85 121.45 122.3 0 195 42 8 0 0 0 0.00019323 2 72513 82.417 66.279 1 0.91816 0.72353 0 17627000 8738500 8888900 6214 118 2354 2418 9691;9692 9691 DVDTYYLSNLVK 12 1 0 Unmodified _DVDTYYLSNLVK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.3713 2 715.364107 1428.71366 72196.32 0.90942 0.00065056 0.13199 9.4419E-05 1.0414 0.00074498 715.364076820804 719.371314962342 121.79 0.63408 121.79 121.43 122.07 0 178 30 8 0 0 0 0.00043863 2 71495 70.977 53.541 1 0.98252 0.7867 0 21621000 10243000 11378000 6215 118 2354 2418 9693;9694 9694 DVDVVCVDMSIEQK 14 1 0 Oxidation (M) _DVDVVCVDM(ox)SIEQK_ DVDVVCVDM(1)SIEQK DVDVVCVDM(42)SIEQK 0 1 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.8793 2 826.878938 1651.74332 70830.91 0.94397 0.00078055 -0.90199 -0.00074583 0.041982 3.4714E-05 826.878596297887 831.385746202137 80.175 0.24379 80.175 80.051 80.294 0 41 19 4 0 0 0 0.0031413 1 47710 42.001 38.356 1 1.2374 1.2575 0 6345500 2528600 3816900 6216 247 2355 2419 9695 9695 185 DVDYSDALTEK 11 1 0 Unmodified _DVDYSDALTEK_ 0 0 0 P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8;A0A0U1RRG6 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.2878 2 628.288065 1254.56158 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.593 1 59.593 59.093 60.093 0 0 0 0 0.021612 1 34693 52.79 41.021 1 6217 1595 2356 2420 9696 9696 DVEDFLSPLLGK 12 1 0 Unmodified _DVEDFLSPLLGK_ 0 0 0 H0YDP7;Q59GE9;A0A024R578;Q13405 H0YDP7 H0YDP7 MRPL49 39S ribosomal protein L49, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.359 2 666.855918 1331.69728 76781.8 1.1503 0.00076712 -0.06974 -4.6506E-05 1.0806 0.00072061 666.855798294437 670.862841090712 130.79 0.54274 130.79 130.45 130.99 0 146 34 6 0 0 0 5.5319E-06 3 85302 110.14 92.831 1 1.032 1.046 0 6660400 3451800 3208600 6218 173 2357 2421 9697;9698;9699 9699 DVEDFLSPLLGK 12 1 0 Unmodified _DVEDFLSPLLGK_ 0 0 0 H0YDP7;Q59GE9;A0A024R578;Q13405 H0YDP7 H0YDP7 MRPL49 39S ribosomal protein L49, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8635 2 666.855918 1331.69728 76023.99 0.90458 0.00060322 -0.16552 -0.00011038 0.73906 0.00049285 666.855802746131 670.862905588706 130.48 0.48189 130.48 130.2 130.68 0 128 30 6 0 0 0 2.6269E-05 1 87154 100.48 92.831 1 1.039 1.048 0 7825600 4124800 3700800 6219 173 2357 2421 9700 9700 DVEDVPITVE 10 0 0 Unmodified _DVEDVPITVE_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1115.5465 1 1115.54666 1114.53938 NaN NaN NaN 0.91092 0.0010162 NaN NaN NaN NaN 102.66 0.70524 102.66 102.27 102.97 0 0 0 0 0.013608 1 64636 65.252 54.031 1 6220 1724 2358 2422 9701 9701 DVEFEVVGDAPEK 13 1 0 Unmodified _DVEFEVVGDAPEK_ 0 0 0 B3KMZ6;B2RDF5;Q9UBT2;U3KQ93;B3KNA3 B3KMZ6 B3KMZ6 UBA2 SUMO-activating enzyme subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.3472 2 717.343372 1432.67219 NaN NaN NaN -2.4759 -0.0017761 NaN NaN NaN NaN 83.797 0.40004 83.797 83.527 83.928 0 0 0 0 6.9036E-09 2 50079 109.24 72.543 1 NaN NaN 0 6637200 0 6637200 6221 887 2359 2423 9702;9703 9702 DVEFEVVGDAPEK 13 1 0 Unmodified _DVEFEVVGDAPEK_ 0 0 0 B3KMZ6;B2RDF5;Q9UBT2;U3KQ93;B3KNA3 B3KMZ6 B3KMZ6 UBA2 SUMO-activating enzyme subunit 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.3483 2 717.343372 1432.67219 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.687 1 82.687 82.187 83.187 0 0 0 0 0.0012126 1 50622 75.819 39.126 1 6222 887 2359 2423 9704 9704 DVEGSTSPQIGDK 13 1 0 Unmodified _DVEGSTSPQIGDK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.8184 2 666.817521 1331.62049 73440.11 0.75502 0.00050346 -0.4114 -0.00027433 0.34362 0.00022913 666.817972673983 670.824655000186 31.026 0.62984 31.026 30.665 31.295 0 224 57 5 0 0 0 0.00012689 3 15323 78.653 78.653 1 2.9482 3.1815 0 34578000 9884800 24693000 6223 42 2360 2424 9705;9706;9707 9707 DVEGSTSPQIGDKVEFSISDK 21 2 0 Unmodified _DVEGSTSPQIGDKVEFSISDK_ 0 0 1 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.0401 3 746.697255 2237.06994 70308.58 0.97714 0.00072963 -0.075187 -5.6142E-05 0.90195 0.00067349 746.69769787886 752.374494932772 96.183 0.43549 96.183 95.991 96.427 0 76 26 6 0 0 0 0.0016491 1 53939 29.84 29.84 1 1.9849 1.7742 0 1946500 738500 1208000 6224 42 2361 2425 9708 9708 DVESYIHR 8 0 1 Unmodified _DVESYIHR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.755 2 509.751256 1017.48796 84244.66 0.46331 0.00023617 -0.53885 -0.00027468 -0.075539 -3.8506E-05 509.751213608798 514.754797831841 39.443 0.60072 39.443 39.246 39.847 0 282 50 10 0 0 0 0.0021178 2 20453 102.71 78.871 1 0.90317 1.0554 0 201750000 98800000 102940000 6225 2065 2362 2426 9709;9710 9710 DVESYIHR 8 0 1 Unmodified _DVESYIHR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.7511 2 509.751256 1017.48796 84056.11 0.43733 0.00022293 -0.41788 -0.00021302 0.019451 9.9153E-06 509.75116606379 514.754923491126 38.436 0.60451 38.436 38.203 38.807 0 258 52 9 0 0 0 0.0049823 2 20085 91.906 75.752 1 0.97364 1.13 0 334010000 190690000 143310000 6226 2065 2362 2426 9711;9712 9711 DVESYIHR 8 0 1 Unmodified _DVESYIHR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.7513 2 509.751256 1017.48796 83670.08 0.3823 0.00019488 -0.3524 -0.00017964 0.029904 1.5243E-05 509.751197847629 514.754971952604 45.223 1.048 45.223 44.971 46.019 0 335 77 9 0 0 0 0.012794 2 21527 66.799 51.167 1 1.1131 0.95724 0 47028000 21393000 25635000 6227 2065 2362 2426 9713;9714 9714 DVESYIHR 8 0 1 Unmodified _DVESYIHR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.7554 2 509.751256 1017.48796 84346.59 0.5939 0.00030274 -0.59474 -0.00030317 -0.00083858 -4.2747E-07 509.751041243491 514.754895390421 45.415 0.58717 45.415 45.128 45.715 3.8147E-06 256 39 10 0 0 0 0.0086013 2 21068 77.923 64.343 1 1.0956 0.95577 0 47995000 24278000 23716000 6228 2065 2362 2426 9715;9716 9716 DVFASEVTPSDLQK 14 1 0 Unmodified _DVFASEVTPSDLQK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.393 2 768.383028 1534.7515 69778.63 0.86534 0.00066492 0.67321 0.00051728 1.5386 0.0011822 768.383608386167 772.390555630946 85.519 0.77387 85.519 85.146 85.919 0 252 63 6 0 0 0 5.6346E-70 2 51363 208.56 193.02 1 1.5355 1.6619 0 43355000 15986000 27369000 6229 1945 2363 2427 9717;9718 9718 DVFASEVTPSDLQK 14 1 0 Unmodified _DVFASEVTPSDLQK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.3909 2 768.383028 1534.7515 69882.86 0.74127 0.00056958 0.37081 0.00028492 1.1121 0.0008545 768.383168242142 772.390084257782 84.735 1.0414 84.735 84.148 85.19 0 361 87 7 0 0 0 2.0702E-46 1 52014 177.44 161.55 1 1.5341 1.7269 0 70359000 24654000 45706000 6230 1945 2363 2427 9719 9719 DVFASEVTPSDLQK 14 1 0 Unmodified _DVFASEVTPSDLQK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.391 2 768.383028 1534.7515 69183.01 0.76591 0.00058851 0.41298 0.00031733 1.1789 0.00090584 768.383930318177 772.390083269103 97.656 0.91127 97.656 97.179 98.091 0 369 56 10 0 0 0 8.8581E-07 3 54909 110.08 98.864 1 2.5478 2.0357 0 20333000 5307400 15026000 6231 1945 2363 2427 9720;9721;9722 9721 DVFASEVTPSDLQK 14 1 0 Unmodified _DVFASEVTPSDLQK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.3912 2 768.383028 1534.7515 68778.78 0.66329 0.00050966 0.48564 0.00037316 1.1489 0.00088282 768.384210396852 772.390186015011 97.614 1.044 97.614 97.055 98.099 0 373 57 10 0 0 0 5.5505E-05 3 54062 92.247 80.714 1 2.6197 2.1038 0 22251000 6090300 16161000 6232 1945 2363 2427 9723;9724;9725 9724 DVFERPSAK 9 1 1 Unmodified _DVFERPSAK_ 0 0 1 P55081 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.7881 2 524.774731 1047.53491 86431.94 0.66701 0.00035003 0.26157 0.00013726 0.92857 0.00048729 524.775099395335 533.785764049344 26.169 0.28453 26.169 26.02 26.305 -1.9073E-06 34 13 3 0 0 0 0.006505 1 11611 88.495 62.112 1 0.95337 1.0858 0 19434000 7861700 11572000 6233 1614 2364 2428 9726 9726 DVFRDPALK 9 1 1 Unmodified _DVFRDPALK_ 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9;Q6LCU2 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7948 2 530.792924 1059.57129 82753.51 0.53469 0.00028381 0.075908 4.0292E-05 0.6106 0.0003241 530.792919584765 539.803980178773 51.91 1.4329 51.91 51.317 52.75 0 767 116 11 0 0 0 0.0033589 2 28500 96.665 54.556 1 0.89836 1.0956 0 731050000 411810000 319240000 6234 93 2365 2429 9727;9728 9727 DVFRDPALK 9 1 1 Unmodified _DVFRDPALK_ 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9;Q6LCU2 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.794 2 530.792924 1059.57129 81117.69 0.54648 0.00029007 -0.29732 -0.00015781 0.24916 0.00013225 530.7928667716 539.803838187716 50.406 1.4448 50.406 49.784 51.228 0 668 118 11 0 0 0 3.0062E-05 1 28246 132.01 76.334 1 0.87372 1.0451 0 1060300000 573050000 487280000 6235 93 2365 2429 9729 9729 DVFRDPALK 9 1 1 Unmodified _DVFRDPALK_ 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9;Q6LCU2 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.7932 2 530.792924 1059.57129 81269.47 0.3281 0.00017415 -0.0011657 -6.1877E-07 0.32693 0.00017353 530.793028826861 539.803979290818 59.12 1.4733 59.12 58.503 59.976 0 553 105 9 0 0 0 0.0075874 1 29996 85.807 41.36 1 0.82027 0.73109 0 66063000 36578000 29485000 6236 93 2365 2429 9730 9730 DVFRDPALK 9 1 1 Unmodified _DVFRDPALK_ 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9;Q6LCU2 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.7936 2 530.792924 1059.57129 81658.93 0.39761 0.00021105 0.059213 3.143E-05 0.45682 0.00024248 530.793070678263 539.803980434102 59.486 1.2694 59.486 58.928 60.197 0 540 97 9 0 0 0 0.023896 1 29555 69.275 33.395 1 0.78457 0.66943 0 64276000 35380000 28896000 6237 93 2365 2429 9731 9731 DVGNLLR 7 0 1 Unmodified _DVGNLLR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.7269 2 393.727052 785.439552 93805.25 0.34445 0.00013562 0.0009926 3.9081E-07 0.34544 0.00013601 393.726975435795 398.731052575401 59.645 1.1439 59.645 59.284 60.428 3.8147E-06 395 87 7 0 0 0 0.027013 1 35057 85.306 44.386 1 0.93319 1.0639 0 137660000 71552000 66104000 6238 2070 2366 2430 9732 9732 DVGSLASVQR 10 0 1 Unmodified _DVGSLASVQR_ 0 0 0 A0A075B730;A0A087X1U6 A0A075B730 A0A075B730 EPPK1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.2815 2 516.277638 1030.54072 NaN NaN NaN -0.78883 -0.00040726 NaN NaN NaN NaN 45.564 0.71819 45.564 45.184 45.902 0 0 0 0 0.0068687 1 25038 66.568 12.793 1 NaN NaN 0 22129000 0 22129000 6239 397 2367 2431 9733 9733 DVHTLLDR 8 0 1 Unmodified _DVHTLLDR_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7615 2 484.761623 967.508694 NaN NaN NaN 0.08948 4.3376E-05 NaN NaN NaN NaN 43.982 0.51743 43.982 43.67 44.188 0 0 0 0 0.01413 1 23874 70.919 49.217 1 NaN NaN 0 19586000 19586000 0 6240 2056 2368 2432 9734 9734 DVHTLLDR 8 0 1 Unmodified _DVHTLLDR_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.7614 2 484.761623 967.508694 88085.52 0.041275 2.0009E-05 0.18413 8.9258E-05 0.2254 0.00010927 484.761524454871 489.765684921997 51.142 0.88392 51.142 50.677 51.561 0 211 55 6 0 0 0 0.052409 1 24593 42.869 32.882 1 0.99678 0.84562 0 3083100 1406600 1676400 6241 2056 2368 2432 9735 9735 DVIDEPIIEEPSR 13 0 1 Unmodified _DVIDEPIIEEPSR_ 0 0 0 A0A024R9J0;O60216 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.3835 2 756.383028 1510.7515 71759.23 0.71973 0.00054439 0.33946 0.00025676 1.0592 0.00080115 756.383955696151 761.386774110202 90.089 0.43343 90.089 89.887 90.321 -7.6294E-06 73 34 4 0 0 0 5.607E-05 2 54424 96.229 71.438 1 0.65031 0.65821 0 15260000 9162600 6097200 6242 280 2369 2433 9736;9737 9737 DVIDEPIIEEPSR 13 0 1 Unmodified _DVIDEPIIEEPSR_ 0 0 0 A0A024R9J0;O60216 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.3832 2 756.383028 1510.7515 NaN NaN NaN 0.27432 0.00020749 NaN NaN NaN NaN 89.359 0.27624 89.359 89.261 89.537 7.6294E-06 0 0 0 3.5616E-09 2 55173 113.63 75.543 1 NaN NaN 0 14377000 14377000 0 6243 280 2369 2433 9738;9739 9739 DVIDEPIIEEPSR 13 0 1 Unmodified _DVIDEPIIEEPSR_ 0 0 0 A0A024R9J0;O60216 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.386 2 756.383028 1510.7515 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.257 1 89.257 88.757 89.757 0 0 0 0 0.0006825 1 55089 81.625 55.686 1 6244 280 2369 2433 9740 9740 DVIDEPIIEEPSR 13 0 1 Unmodified _DVIDEPIIEEPSR_ 0 0 0 A0A024R9J0;O60216 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.3884 2 756.383028 1510.7515 70995.52 0.46018 0.00034807 0.77335 0.00058495 1.2335 0.00093302 756.383298560819 761.387468804497 102.48 0.59615 102.48 102.16 102.76 0 104 41 4 0 0 0 0.00682 2 57310 45.764 36.442 1 1.2589 1.1133 0 3996500 2213200 1783300 6245 280 2369 2433 9741;9742 9741 DVIEEHGPSEK 11 1 0 Unmodified _DVIEEHGPSEK_ 0 0 0 A0A0F7KYT8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;H7C4S4 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.3035 2 620.296224 1238.5779 80244.4 0.51627 0.00032024 0.065455 4.0602E-05 0.58173 0.00036084 620.296436714891 624.303146926462 24.258 0.31456 24.258 24.121 24.436 0 75 17 6 0 0 0 0.036293 1 8437 36.585 33.607 1 2.1735 1.8314 0 1931300 624560 1306800 6246 531 2370 2434 9743 9743 DVIEEHGPSEK 11 1 0 Unmodified _DVIEEHGPSEK_ 0 0 0 A0A0F7KYT8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;H7C4S4 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.8049 2 620.296224 1238.5779 78226.72 0.44094 0.00027351 0.10108 6.27E-05 0.54202 0.00033621 620.296655887529 624.303257441983 24.297 0.39809 24.297 24.136 24.534 0 86 20 6 0 0 0 0.0073354 1 7983 52.79 50.635 1 1.8691 1.6381 0 1299400 511390 788000 6247 531 2370 2434 9744 9744 DVIEEYFK 8 1 0 Unmodified _DVIEEYFK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.7652 2 521.758215 1041.50188 84555.09 0.47565 0.00024817 -0.31874 -0.00016631 0.15691 8.1867E-05 521.757727910718 525.765071879122 92.538 1.2923 92.538 91.938 93.231 0 637 119 8 0 0 0 0.0015831 4 56226 102.72 79.7 1 1.5051 1.6975 0 111920000 43660000 68261000 6248 1515 2371 2435 9745;9746;9747;9748 9747 DVIEEYFK 8 1 0 Unmodified _DVIEEYFK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.7653 2 521.758215 1041.50188 83623.22 0.68624 0.00035805 -0.49844 -0.00026007 0.18779 9.7984E-05 521.757592396712 525.764990190508 91.778 1.2189 91.778 91.219 92.438 7.6294E-06 519 106 7 0 0 0 0.0036078 4 57003 91.041 71.405 1 1.4933 1.7101 0 163050000 59439000 103610000 6249 1515 2371 2435 9749;9750;9751;9752 9751 DVIEEYFK 8 1 0 Unmodified _DVIEEYFK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.7656 2 521.758215 1041.50188 84750.79 0.33004 0.0001722 -0.28232 -0.0001473 0.047715 2.4896E-05 521.757626834275 525.765140585757 105.32 0.94324 105.32 104.83 105.77 0 292 64 6 0 0 0 0.057861 1 58968 46.994 40.17 1 1.4925 1.2179 0 7934600 3248000 4686600 6250 1515 2371 2435 9753 9753 DVIGFNMAGLDYLK 14 1 0 Oxidation (M) _DVIGFNM(ox)AGLDYLK_ DVIGFNM(1)AGLDYLK DVIGFNM(68.89)AGLDYLK 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.402 2 786.392341 1570.77013 67548.57 0.90108 0.0007086 0.25153 0.0001978 1.1526 0.0009064 786.392190765753 790.399441612716 114.96 0.8282 114.96 114.61 115.44 0 277 53 8 0 0 0 9.8413E-05 3 73041 68.893 56.814 1 1.2808 1.3814 0 41589000 18324000 23265000 6251 1827 2372 2436 9754;9755;9756 9756 1682 DVIGFNMAGLDYLK 14 1 0 Oxidation (M) _DVIGFNM(ox)AGLDYLK_ DVIGFNM(1)AGLDYLK DVIGFNM(77.12)AGLDYLK 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.3932 2 786.392341 1570.77013 67445.52 0.83933 0.00066004 0.26827 0.00021097 1.1076 0.00087101 786.392144466256 790.399293844256 114.45 0.67705 114.45 114.14 114.82 -7.6294E-06 249 44 8 0 0 0 7.1657E-05 1 74348 77.124 67.789 1 1.3142 1.4468 0 42879000 17620000 25259000 6252 1827 2372 2436 9757 9757 1682 DVIGFNMAGLDYLK 14 1 0 Oxidation (M) _DVIGFNM(ox)AGLDYLK_ DVIGFNM(1)AGLDYLK DVIGFNM(63.73)AGLDYLK 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 786.8954 2 786.392341 1570.77013 68453.59 0.94752 0.00074512 -0.12819 -0.00010081 0.81933 0.00064431 786.39200523614 790.399631723465 125.96 0.73055 125.96 125.66 126.4 0 157 30 8 0 0 0 0.000116 2 75627 63.727 57.343 1 0.89662 0.71981 0 7703600 4005200 3698400 6253 1827 2372 2436 9758;9759 9759 1682 DVIGFNMAGLDYLK 14 1 0 Oxidation (M) _DVIGFNM(ox)AGLDYLK_ DVIGFNM(1)AGLDYLK DVIGFNM(65.18)AGLDYLK 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 790.4001 2 786.392341 1570.77013 68213.15 0.76313 0.00060012 -0.24423 -0.00019206 0.5189 0.00040806 786.392039789896 790.399412956089 125.86 0.66914 125.86 125.56 126.23 7.6294E-06 166 31 8 0 0 0 0.00011106 1 74629 65.179 58.796 1 0.93933 0.76898 0 8520600 4663400 3857200 6254 1827 2372 2436 9760 9760 1682 DVIGFNMAGLDYLK 14 1 0 Unmodified _DVIGFNMAGLDYLK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.4026 2 778.394884 1554.77522 71142.33 1.1463 0.00089229 -0.29404 -0.00022888 0.85228 0.00066341 778.395013172455 782.40158158696 126.94 0.37292 126.94 126.79 127.17 0 62 20 5 0 0 0 0.0016399 1 82673 52.247 37.828 1 0.51274 0.56198 0 3187300 1979900 1207400 6255 1827 2372 2437 9761 9761 DVIGFNMAGLDYLK 14 1 0 Unmodified _DVIGFNMAGLDYLK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.3964 2 778.394884 1554.77522 73719.65 1.0097 0.00078598 0.09228 7.183E-05 1.102 0.00085781 778.394989791591 782.402239068395 126.63 0.35739 126.63 126.45 126.8 0 71 21 6 0 0 0 0.0073196 1 84543 40.589 30.636 1 0.70701 0.77615 0 3249600 1981500 1268100 6256 1827 2372 2437 9762 9762 DVISAQFENTTTSK 14 1 0 Unmodified _DVISAQFENTTTSK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.8796 2 770.87811 1539.74167 73852.84 0.30542 0.00023544 0.55834 0.00043041 0.86376 0.00066585 771.380200465646 774.886603122282 69.765 0.32516 69.765 69.632 69.957 0 118 28 6 0 0 0 9.9709E-10 1 40587 121.68 121.68 1 0.82587 0.81231 0 19960000 9415700 10544000 6257 1835 2373 2438 9763 9763 DVISAQFENTTTSK 14 1 0 Unmodified _DVISAQFENTTTSK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.8855 2 770.87811 1539.74167 70401.01 0.59406 0.00045795 -0.27991 -0.00021577 0.31415 0.00024217 770.877818678143 774.885094669519 79.694 0.57954 79.694 79.374 79.953 -7.6294E-06 148 36 6 0 0 0 0.0091924 2 42947 37.426 36.417 1 2.1467 1.6855 0 3154700 1145500 2009300 6258 1835 2373 2438 9764;9765 9765 DVLAHQVPNAK 11 1 0 Unmodified _DVLAHQVPNAK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013;M0QZ34;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.3285 2 596.327662 1190.64077 NaN NaN NaN -0.067852 -4.0462E-05 NaN NaN NaN NaN 31.395 0.35084 31.395 31.151 31.502 0 0 0 0 5.4796E-08 2 15406 110.76 91.513 1 NaN NaN 0 6036500 6036500 0 6259 1068 2374 2439 9766;9767 9767 DVLAHQVPNAK 11 1 0 Unmodified _DVLAHQVPNAK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013;M0QZ34;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.3349 2 596.327662 1190.64077 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.413 1 31.413 30.913 31.913 1.9073E-06 0 0 0 0.00032109 1 15497 78.334 33.887 1 6260 1068 2374 2439 9768 9768 DVLAHQVPNAK 11 1 0 Unmodified _DVLAHQVPNAK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013;M0QZ34;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.3287 2 596.327662 1190.64077 80293.41 0.70161 0.00041839 0.12552 7.4852E-05 0.82713 0.00049324 596.328053715195 600.334623924075 30.782 0.56878 30.782 30.408 30.977 0 131 49 4 0 0 0 5.6595E-05 1 15076 99.013 99.013 1 1.2332 1.2683 0 17964000 8138500 9825500 6261 1068 2374 2439 9769 9769 DVLAHQVPNAK 11 1 0 Unmodified _DVLAHQVPNAK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013;M0QZ34;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.3285 2 596.327662 1190.64077 78547.35 0.32238 0.00019224 0.57258 0.00034145 0.89496 0.00053369 596.328483739206 600.334688295738 35.773 0.56329 35.773 35.498 36.061 0 199 45 6 0 0 0 0.0068025 1 15928 53.751 53.751 1 1.2643 0.98491 0 3331700 1432100 1899600 6262 1068 2374 2439 9770 9770 DVLAHQVPNAK 11 1 0 Unmodified _DVLAHQVPNAK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013;M0QZ34;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.8305 2 596.327662 1190.64077 77965.26 0.62165 0.00037071 0.1092 6.5116E-05 0.73085 0.00043582 596.328140192106 600.33447989889 35.931 0.50765 35.931 35.629 36.137 0 162 44 5 0 0 0 0.00090132 2 15563 71.614 71.614 1 1.2344 0.96563 0 3382800 1886100 1496700 6263 1068 2374 2439 9771;9772 9772 DVLDSVL 7 0 0 Unmodified _DVLDSVL_ 0 0 0 P81605 P81605 P81605 DCD Dermcidin;Survival-promoting peptide;DCD-1 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.4078 1 760.408711 759.401435 NaN NaN NaN 0.14066 0.00010696 NaN NaN NaN NaN 118.85 0.71652 118.85 118.49 119.21 -7.6294E-06 0 0 0 0.052014 1 78045 69.39 58.471 1 6264 1666 2375 2440 9773 9773 DVLGWGENDR 10 0 1 Unmodified _DVLGWGENDR_ 0 0 0 A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3 A0A024RBP2 A0A024RBP2 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.7744 2 580.770177 1159.5258 80489.09 0.079238 4.6019E-05 0.71928 0.00041774 0.79852 0.00046376 580.770577491326 585.774672879459 72.472 0.47533 72.472 72.231 72.707 0 177 34 7 0 0 0 3.8375E-08 2 42340 118.18 109.33 1 1.6126 1.7339 0 47239000 18537000 28702000 6265 343 2376 2441 9774;9775 9774 DVLGWGENDR 10 0 1 Unmodified _DVLGWGENDR_ 0 0 0 A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3 A0A024RBP2 A0A024RBP2 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.7747 2 580.770177 1159.5258 79163.37 0.33778 0.00019617 0.89457 0.00051954 1.2324 0.00071572 580.770663718369 585.774875518969 71.292 0.47816 71.292 71.068 71.546 0 133 34 6 0 0 0 0.00026167 2 42629 92.051 87.641 1 1.5757 1.8193 0 70516000 29535000 40982000 6266 343 2376 2441 9776;9777 9776 DVLGWGENDR 10 0 1 Unmodified _DVLGWGENDR_ 0 0 0 A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3 A0A024RBP2 A0A024RBP2 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.7747 2 580.770177 1159.5258 81978.84 0.51236 0.00029756 0.5131 0.00029799 1.0255 0.00059555 580.770779298777 585.774354032428 82.044 0.90168 82.044 81.56 82.461 0 232 52 8 0 0 0 0.0019203 1 44593 71.451 67.094 1 3.4481 2.8283 0 12385000 3189200 9195800 6267 343 2376 2441 9778 9778 DVLIQGLIDENPGLQLIIR 19 0 1 Unmodified _DVLIQGLIDENPGLQLIIR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1060.5421 2 1060.1097 2118.20485 61327.04 0.35954 0.00038116 1.6858 0.0017871 2.0453 0.0021683 1060.61268265802 1066.11755111213 134.96 0.1404 134.96 134.86 135 0 12 2 6 0 0 0 2.5675E-26 1 82655 123.02 123.02 1 0.19891 0.1658 0 10608000 8968700 1639000 6268 1665 2377 2442 9779 9779 DVLLDVAYAYGK 12 1 0 Unmodified _DVLLDVAYAYGK_ 0 0 0 D3DVL7;B4DU42;Q969Z0;C9IZN7;B3KRS4;B3KMT3 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8585 2 663.850635 1325.68672 NaN NaN NaN 1.075 0.00071363 NaN NaN NaN NaN 111.51 0.56638 111.51 111.1 111.67 0 0 0 0 0.00077045 1 70118 85.377 41.608 1 NaN NaN 0 9850000 0 9850000 6269 1036 2378 2443 9780 9780 DVLLPWYNAYR 11 0 1 Unmodified _DVLLPWYNAYR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.3644 2 705.364244 1408.71394 NaN NaN NaN 0.55803 0.00039362 NaN NaN NaN NaN 117.34 0.46629 117.34 117.1 117.56 7.6294E-06 0 0 0 0.00018196 1 76911 92.439 72.653 1 NaN NaN 0 3637000 3637000 0 6270 1561 2379 2444 9781 9781 DVLLQVDDER 10 0 1 Unmodified _DVLLQVDDER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.3117 2 601.306592 1200.59863 NaN NaN NaN 0.69135 0.00041572 NaN NaN NaN NaN 73.332 0.33138 73.332 73.145 73.477 0 0 0 0 0.0037627 1 43955 75.294 54.965 1 NaN NaN 0 3814600 0 3814600 6271 81 2380 2445 9782 9782 DVLLQVDDERR 11 0 2 Unmodified _DVLLQVDDERR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.358 2 679.357148 1356.69974 70654.81 0.43948 0.00029856 0.77966 0.00052967 1.2191 0.00082823 679.357528478591 689.366040716763 55.201 1.133 55.201 54.854 55.987 0 253 82 5 0 0 0 0.00058144 1 31787 85.622 55.368 1 1.9238 2.2938 0 235610000 72534000 163080000 6272 81 2381 2446 9783 9783 DVLLTAWENEQAVIER 16 0 1 Unmodified _DVLLTAWENEQAVIER_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.9879 2 943.486347 1884.95814 NaN NaN NaN -0.46093 -0.00043489 NaN NaN NaN NaN 120.8 0.51772 120.8 120.56 121.08 0 0 0 0 0.0029499 1 77869 74.46 60.651 1 NaN NaN 0 7442500 7442500 0 6273 118;1184 2382 2447 9784 9784 DVLLTAWENEQAVIER 16 0 1 Unmodified _DVLLTAWENEQAVIER_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.4874 2 943.486347 1884.95814 NaN NaN NaN -0.12126 -0.0001144 NaN NaN NaN NaN 120.44 0.50677 120.44 120.14 120.65 -7.6294E-06 0 0 0 1.4087E-08 1 79469 122.39 103.26 1 NaN NaN 0 8569600 8569600 0 6274 118;1184 2382 2447 9785 9785 DVLLTAWENEQAVIER 16 0 1 Unmodified _DVLLTAWENEQAVIER_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 948.9903 2 943.486347 1884.95814 61471.38 1.1374 0.0010731 -0.82552 -0.00077886 0.31184 0.00029422 943.987261675994 948.991395139384 132.82 0.93271 132.82 132.54 133.47 -1.5259E-05 123 39 7 0 0 0 0.0041719 1 79936 36.519 30.078 1 0.7577 0.61743 0 9583800 5148600 4435200 6275 118;1184 2382 2447 9786 9786 DVLSVAFSSDNR 12 0 1 Unmodified _DVLSVAFSSDNR_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6RFX4;B4DVD2;D6RFZ9;D6RAU2;E9PD14 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3271 2 655.322773 1308.63099 76218.21 0.70235 0.00046026 0.35934 0.00023549 1.0617 0.00069575 655.322412451297 660.327145893553 50.608 0.38746 50.608 50.369 50.756 0 98 34 4 0 0 0 0.0061675 1 28584 49.418 26.678 1 1.7886 1.7894 0 17021000 6675000 10346000 6276 1227 2383 2448 9787 9787 DVLSVAFSSDNR 12 0 1 Unmodified _DVLSVAFSSDNR_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6RFX4;B4DVD2;D6RFZ9;D6RAU2;E9PD14 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.3279 2 655.322773 1308.63099 75038.64 0.72341 0.00047406 0.53707 0.00035195 1.2605 0.00082602 655.323173858945 660.327308066441 104.38 0.82121 104.38 103.93 104.75 0 311 52 8 0 0 0 1.3553E-05 2 59318 106.4 94.764 1 1.7585 1.4491 0 18371000 6049300 12322000 6277 1227 2383 2448 9788;9789 9789 DVLSVAFSSDNR 12 0 1 Unmodified _DVLSVAFSSDNR_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6RFX4;B4DVD2;D6RFZ9;D6RAU2;E9PD14 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 660.3281 2 655.322773 1308.63099 75129.39 0.49068 0.00032155 0.59202 0.00038796 1.0827 0.00070952 655.323246954773 660.327340128662 104.32 0.85451 104.32 103.89 104.75 7.6294E-06 290 53 8 0 0 0 0.00016719 2 58404 91.855 81.103 1 1.8963 1.5696 0 14863000 4887400 9975800 6278 1227 2383 2448 9790;9791 9791 DVMASAALAAEPSPLPGSLIR 21 0 1 Oxidation (M) _DVM(ox)ASAALAAEPSPLPGSLIR_ DVM(1)ASAALAAEPSPLPGSLIR DVM(57.43)ASAALAAEPSPLPGSLIR 0 1 0 Q8NDD1;Q5TBH9;Q5TBI2;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1046.5509 2 1041.54862 2081.08269 60079.04 0.42885 0.00044666 -0.28395 -0.00029575 0.14489 0.00015091 1042.05033655424 1046.55258746864 115.47 0.53549 115.47 115.21 115.74 0 181 36 8 0 0 0 3.0865E-07 2 73355 57.434 57.434 1 1.6112 1.633 0 28185000 10910000 17274000 6279 1925 2384 2449 9792;9793 9792 1755 DVMASAALAAEPSPLPGSLIR 21 0 1 Oxidation (M) _DVM(ox)ASAALAAEPSPLPGSLIR_ DVM(1)ASAALAAEPSPLPGSLIR DVM(107.99)ASAALAAEPSPLPGSLIR 0 1 0 Q8NDD1;Q5TBH9;Q5TBI2;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1046.5527 2 1041.54862 2081.08269 59463.87 0.66087 0.00068832 -0.34736 -0.0003618 0.3135 0.00032653 1042.05011477464 1047.05412345117 114.98 0.46434 114.98 114.76 115.23 0 172 29 8 0 0 0 5.768E-16 2 74802 107.99 107.99 1 1.5551 1.6908 0 28616000 11855000 16761000 6280 1925 2384 2449 9794;9795 9794 1755 DVMASAALAAEPSPLPGSLIR 21 0 1 Oxidation (M) _DVM(ox)ASAALAAEPSPLPGSLIR_ DVM(1)ASAALAAEPSPLPGSLIR DVM(65.56)ASAALAAEPSPLPGSLIR 0 1 0 Q8NDD1;Q5TBH9;Q5TBI2;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1042.0505 2 1041.54862 2081.08269 59986.3 0.47171 0.00049131 0.050839 5.2951E-05 0.52255 0.00054426 1041.54962945022 1047.05434384756 126.76 0.52594 126.76 126.47 127 -7.6294E-06 119 20 7 0 0 0 5.9735E-08 1 76246 65.565 60.763 1 0.97342 0.83033 0 5618500 2589600 3029000 6281 1925 2384 2449 9796 9796 1755 DVMASAALAAEPSPLPGSLIR 21 0 1 Oxidation (M) _DVM(ox)ASAALAAEPSPLPGSLIR_ DVM(1)ASAALAAEPSPLPGSLIR DVM(46.8)ASAALAAEPSPLPGSLIR 0 1 0 Q8NDD1;Q5TBH9;Q5TBI2;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1041.5498 2 1041.54862 2081.08269 60621.91 0.33681 0.00035081 -0.020123 -2.0959E-05 0.31669 0.00032985 1041.54920663511 1046.55269537983 126.61 0.5846 126.61 126.32 126.91 7.6294E-06 123 25 8 0 0 0 1.2074E-05 2 75255 46.797 44.088 1 0.98588 0.82212 0 6676700 3403500 3273200 6282 1925 2384 2449 9797;9798 9798 1755 DVMQQQLAEYQELLDVK 17 1 0 Oxidation (M) _DVM(ox)QQQLAEYQELLDVK_ DVM(1)QQQLAEYQELLDVK DVM(70.41)QQQLAEYQELLDVK 0 1 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1034.01 2 1033.50916 2065.00377 60100.46 0.72361 0.00074786 0.038718 4.0016E-05 0.76233 0.00078788 1034.01073359118 1037.51602136785 115.1 0.37755 115.1 114.87 115.24 0 111 23 7 0 0 0 3.3772E-05 2 73168 70.412 70.412 1 1.5392 1.5561 0 10123000 4412900 5710400 6283 1682 2385 2450 9799;9800 9800 1497 DVMQQQLAEYQELLDVK 17 1 0 Oxidation (M) _DVM(ox)QQQLAEYQELLDVK_ DVM(1)QQQLAEYQELLDVK DVM(79.61)QQQLAEYQELLDVK 0 1 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1037.5156 2 1033.50916 2065.00377 60746.22 0.39474 0.00040797 -0.26432 -0.00027318 0.13042 0.00013479 1034.51121727557 1037.51559218827 114.64 0.44534 114.64 114.41 114.86 7.6294E-06 102 27 6 0 0 0 1.9618E-05 3 74527 79.614 79.614 1 1.3896 1.4142 0 12445000 5738600 6706600 6284 1682 2385 2450 9801;9802;9803 9801 1497 DVNAAIAAIK 10 1 0 Unmodified _DVNAAIAAIK_ 0 0 0 P68366 P68366 P68366 TUBA4A Tubulin alpha-4A chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.2948 2 493.287474 984.560395 NaN NaN NaN 0.095525 4.7121E-05 NaN NaN NaN NaN 74.672 0.17513 74.672 74.54 74.715 0 0 0 0 0.033412 1 43823 51.113 32.382 1 NaN NaN 0 2906000 0 2906000 6285 1659 2386 2451 9804 9804 DVNAAIAAIK 10 1 0 Unmodified _DVNAAIAAIK_ 0 0 0 P68366 P68366 P68366 TUBA4A Tubulin alpha-4A chain MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.5968 2 493.287474 984.560395 87189.01 0.38691 0.00019086 0.090777 4.4779E-05 0.47769 0.00023564 493.287818120913 497.294454082633 75.322 1.0372 75.322 74.715 75.752 0 185 86 4 0 0 0 0.044966 1 44271 60.91 47.933 1 1.6537 1.6205 0 21283000 7649700 13634000 6286 1659 2386 2451 9805 9805 DVNAAIAAIK 10 1 0 Unmodified _DVNAAIAAIK_ 0 0 0 P68366 P68366 P68366 TUBA4A Tubulin alpha-4A chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.2944 2 493.287474 984.560395 NaN NaN NaN -0.13122 -6.4727E-05 NaN NaN NaN NaN 74.351 1.047 74.351 73.645 74.692 0 0 0 0 0.015301 1 44538 57.859 48.078 1 NaN NaN 0 11355000 0 11355000 6287 1659 2386 2451 9806 9806 DVNAAIAAIK 10 1 0 Unmodified _DVNAAIAAIK_ 0 0 0 P68366 P68366 P68366 TUBA4A Tubulin alpha-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.2877 2 493.287474 984.560395 87894.99 0.20685 0.00010204 0.048061 2.3708E-05 0.25491 0.00012574 493.287382897122 497.294505173391 85.481 0.79675 85.481 85.109 85.906 0 139 50 4 0 0 0 0.034771 1 46811 40.882 36.679 1 1.1349 0.94675 0 1719200 809130 910090 6288 1659 2386 2451 9807 9807 DVNAAIAAIK 10 1 0 Unmodified _DVNAAIAAIK_ 0 0 0 P68366 P68366 P68366 TUBA4A Tubulin alpha-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.2877 2 493.287474 984.560395 89166.77 0.22009 0.00010857 0.46043 0.00022712 0.68052 0.00033569 493.287491356596 497.294917998982 85.709 0.6905 85.709 85.372 86.063 0 114 41 4 0 0 0 0.036089 1 46215 40.352 36.191 1 1.2584 1.0832 0 1390100 561830 828270 6289 1659 2386 2451 9808 9808 DVNAAIATIK 10 1 0 Unmodified _DVNAAIATIK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;Q53GA7;F5H5D3;Q9BQE3;Q8N532;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.2928 2 508.292756 1014.57096 83817.12 0.29804 0.00015149 -0.07861 -3.9957E-05 0.21943 0.00011154 508.292812890366 512.299757583523 68.712 1.8174 68.712 68.179 69.997 0 740 158 8 0 0 0 0.00031979 3 39681 90.15 65.543 1 1.5121 1.7759 0 307520000 127020000 180500000 6290 922;1257;1869 2387 2452 9809;9810;9811 9810 DVNAAIATIK 10 1 0 Unmodified _DVNAAIATIK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;Q53GA7;F5H5D3;Q9BQE3;Q8N532;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.3006 2 508.292756 1014.57096 83931.38 0.29444 0.00014966 -0.18245 -9.2737E-05 0.11199 5.6925E-05 508.292809815542 512.299742212222 67.544 1.3293 67.544 67.158 68.488 0 587 107 8 0 0 0 0.00032108 2 39896 90.108 69.161 1 1.5114 1.7779 0 373640000 137410000 236230000 6291 922;1257;1869 2387 2452 9812;9813 9812 DVNAAIATIK 10 1 0 Unmodified _DVNAAIATIK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;Q53GA7;F5H5D3;Q9BQE3;Q8N532;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.3006 2 508.292756 1014.57096 87785.38 0.2017 0.00010253 0.75102 0.00038174 0.95272 0.00048426 508.293350506935 512.300059901684 68.669 0.42394 68.669 68.488 68.912 0 74 37 4 0 0 0 0.040524 1 40845 38.567 27.073 1 1.6826 1.7287 0 9502300 4160700 5341500 6292 922;1257;1869 2387 2452 9814 9814 DVNAAIATIK 10 1 0 Unmodified _DVNAAIATIK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;Q53GA7;F5H5D3;Q9BQE3;Q8N532;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 512.3001 2 508.292756 1014.57096 84992.05 0.36559 0.00018583 0.025534 1.2979E-05 0.39113 0.00019881 508.292794866145 512.299781739708 78.303 1.3941 78.303 77.808 79.202 0 419 87 8 0 0 0 0.010146 2 41860 53.751 45.531 1 1.1853 0.96313 0 28393000 12679000 15714000 6293 922;1257;1869 2387 2452 9815;9816 9815 DVNAAIATIK 10 1 0 Unmodified _DVNAAIATIK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;Q53GA7;F5H5D3;Q9BQE3;Q8N532;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.2997 2 508.292756 1014.57096 85523.92 0.39139 0.00019894 -0.039829 -2.0245E-05 0.35157 0.0001787 508.292746111565 512.299773150741 78.621 1.5087 78.621 78.186 79.694 0 411 95 8 0 0 0 0.0025392 2 41294 68.626 51.158 1 1.2815 1.038 0 24235000 11142000 13093000 6294 922;1257;1869 2387 2452 9817;9818 9818 DVNQQEFVR 9 0 1 Unmodified _DVNQQEFVR_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.7847 2 567.780544 1133.54654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.67 1 40.67 40.17 41.17 0 0 0 0 5.0902E-09 1 21310 129.47 95.669 1 6295 811 2388 2453 9819 9819 DVNQQEFVR 9 0 1 Unmodified _DVNQQEFVR_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.7808 2 567.780544 1133.54654 78774.86 0.99361 0.00056415 -0.35114 -0.00019937 0.64247 0.00036478 567.78042554391 572.784439319683 39.812 0.75247 39.812 39.519 40.271 -3.8147E-06 288 63 8 0 0 0 7.1766E-06 2 21118 130.27 109.75 1 1.065 1.2436 0 545930000 256420000 289510000 6296 811 2388 2453 9820;9821 9821 DVNQQEFVR 9 0 1 Unmodified _DVNQQEFVR_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.7848 2 567.780544 1133.54654 77920.16 0.34186 0.0001941 -0.23297 -0.00013227 0.10889 6.1828E-05 567.780639995074 572.784638613222 46.457 0.91256 46.457 46.045 46.958 0 209 61 7 0 0 0 0.0012677 3 22401 87.639 82.279 1 1.2187 1.0007 0 17267000 7584800 9682100 6297 811 2388 2453 9822;9823;9824 9823 DVNQQEFVR 9 0 1 Unmodified _DVNQQEFVR_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.7849 2 567.780544 1133.54654 78574.25 0.144 8.1759E-05 0.26683 0.0001515 0.41083 0.00023326 567.780761442323 572.784759496098 46.625 0.6882 46.625 46.36 47.048 0 191 41 7 0 0 0 0.0016421 2 21944 82.75 73.888 1 1.1289 0.95572 0 18371000 8367900 10003000 6298 811 2388 2453 9825;9826 9826 DVNTNSENWAVVK 13 1 0 Unmodified _DVNTNSENWAVVK_ 0 0 0 Q6ZMY0;Q9H6S0 Q6ZMY0 Q6ZMY0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.3669 2 738.359887 1474.70522 76237.79 0.11456 8.4585E-05 0.23158 0.00017099 0.34614 0.00025557 738.360632136861 742.366257755383 69.835 0.18397 69.835 69.755 69.939 -7.6294E-06 41 16 6 0 0 0 3.3404E-09 1 40610 121.9 97.123 1 1.4313 1.423 0 8058500 3897400 4161100 6299 1863 2389 2454 9827 9827 DVNTNSENWAVVK 13 1 0 Unmodified _DVNTNSENWAVVK_ 0 0 0 Q6ZMY0;Q9H6S0 Q6ZMY0 Q6ZMY0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.3685 2 738.359887 1474.70522 NaN NaN NaN -1.0511 -0.00077611 NaN NaN NaN NaN 68.652 0.22973 68.652 68.568 68.797 0 0 0 0 6.0279E-09 1 40783 110.39 77.125 1 NaN NaN 0 6985800 0 6985800 6300 1863 2389 2454 9828 9828 DVNVNFEK 8 1 0 Unmodified _DVNVNFEK_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185;B4DDC6 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7477 2 482.740357 963.46616 86659.24 0.16865 8.1412E-05 0.21991 0.00010616 0.38856 0.00018757 482.740443654809 486.747474166519 47.936 1.1526 47.936 47.55 48.703 3.8147E-06 491 95 9 0 0 0 0.013467 1 25904 65.246 48.006 1 4.4319 5.0273 0 158610000 28784000 129830000 6301 323 2390 2455 9829 9829 DVNVNFEK 8 1 0 Unmodified _DVNVNFEK_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185;B4DDC6 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7476 2 482.740357 963.46616 87106.12 0.22505 0.00010864 -0.073838 -3.5644E-05 0.15121 7.2997E-05 482.740294057666 486.747330909881 47.084 0.88979 47.084 46.627 47.517 3.8147E-06 351 72 8 0 0 0 0.010592 2 26004 71.877 53.553 1 4.5978 5.3164 0 200590000 38749000 161840000 6302 323 2390 2455 9830;9831 9830 DVNVNFEK 8 1 0 Unmodified _DVNVNFEK_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185;B4DDC6 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 964.4728 1 964.473437 963.46616 62319.27 0.2296 0.00022144 0.058046 5.5984E-05 0.28765 0.00027743 964.472663849059 972.487770698423 47.079 0.58372 47.079 46.756 47.34 0 164 48 5 0 0 0 0.0092601 1 26059 93.649 56.09 1 4.4764 4.8974 0 40615000 8019400 32595000 6303 323 2390 2455 9832 9832 DVPAYSQDTFK 11 1 0 Unmodified _DVPAYSQDTFK_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;B7Z4L4 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.8085 2 635.801143 1269.58773 77898.77 0.68592 0.00043611 0.15433 9.8124E-05 0.84025 0.00053423 635.800992190147 639.808391202914 57.566 0.67731 57.566 57.156 57.834 0 168 50 5 0 0 0 0.0018568 2 32585 64.297 59.846 1 1.2103 1.2463 0 10802000 4666500 6135100 6304 1444 2391 2456 9833;9834 9834 DVPAYSQDTFK 11 1 0 Unmodified _DVPAYSQDTFK_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;B7Z4L4 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.8 2 635.801143 1269.58773 77267.63 0.64533 0.0004103 0.16421 0.0001044 0.80954 0.0005147 635.801010716621 639.808401758688 56.7 0.45378 56.7 56.499 56.953 0 120 34 5 0 0 0 0.0073354 2 32650 52.79 45.73 1 1.2862 1.3241 0 18070000 8250800 9818800 6305 1444 2391 2456 9835;9836 9836 DVPDSQQHPAPEK 13 1 0 Unmodified _DVPDSQQHPAPEK_ 0 0 0 O60885;A0A024R7H8;Q6PIS5;Q6NXE4;Q05BM2;Q5BJ26;M0QZD9 O60885 O60885 BRD4 Bromodomain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.3447 2 724.344237 1446.67392 72161.42 0.5016 0.00036333 0.88679 0.00064234 1.3884 0.0010057 724.344228304046 728.852803740998 16.927 0.35491 16.927 16.826 17.181 0 42 11 7 0 0 0 0.0020555 1 4207 55.314 50.001 1 0.67085 0.69401 0 4135500 2135200 2000300 6306 1399 2392 2457 9837 9837 DVPDSQQHPAPEK 13 1 0 Unmodified _DVPDSQQHPAPEK_ 0 0 0 O60885;A0A024R7H8;Q6PIS5;Q6NXE4;Q05BM2;Q5BJ26;M0QZD9 O60885 O60885 BRD4 Bromodomain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.3469 2 724.344237 1446.67392 72311.91 0.90012 0.000652 0.12672 9.1788E-05 1.0268 0.00074379 724.344406622652 728.351434782266 16.873 0.26001 16.873 16.777 17.037 0 29 9 4 0 0 0 0.00015017 2 3932 84.479 84.479 1 0.67055 0.67604 0 7613500 4270800 3342700 6307 1399 2392 2457 9838;9839 9838 DVPESFTSEAYQWLNR 16 0 1 Unmodified _DVPESFTSEAYQWLNR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 971.4528 2 971.452505 1940.89046 62494.63 0.5725 0.00055616 0.099206 9.6374E-05 0.6717 0.00065253 971.953476969567 976.958923628858 121.53 0.62849 121.53 121.21 121.84 -7.6294E-06 266 40 10 0 0 0 1.3754E-08 1 78432 104.87 98.68 1 0.78709 0.85207 0 49288000 27633000 21654000 6308 716 2393 2458 9840 9840 DVPESFTSEAYQWLNR 16 0 1 Unmodified _DVPESFTSEAYQWLNR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 976.4573 2 971.452505 1940.89046 62479.67 0.57513 0.00055871 -0.08533 -8.2894E-05 0.4898 0.00047582 971.953281713401 976.456766366346 121.14 0.60177 121.14 120.84 121.44 0 210 35 9 0 0 0 8.5138E-09 2 80200 107.85 107.85 1 0.81979 0.9375 0 50606000 27762000 22844000 6309 716 2393 2458 9841;9842 9842 DVPESFTSEAYQWLNR 16 0 1 Unmodified _DVPESFTSEAYQWLNR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 976.4576 2 971.452505 1940.89046 62435.88 0.20111 0.00019537 0.65685 0.00063809 0.85796 0.00083347 971.954342944147 976.958692571924 133.82 1.0144 133.82 133.35 134.37 0 159 23 11 0 0 0 5.3665E-05 2 81473 83.314 83.314 1 1.221 1.0102 0 19677000 8769700 10908000 6310 716 2393 2458 9843;9844 9844 DVPESFTSEAYQWLNR 16 0 1 Unmodified _DVPESFTSEAYQWLNR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 976.9588 2 971.452505 1940.89046 62157.81 0.62664 0.00060875 0.16598 0.00016125 0.79263 0.00077 971.953690923487 976.958433661016 133.62 0.78595 133.62 133.19 133.98 0 166 31 9 0 0 0 1.3754E-08 2 80414 104.87 97.256 1 1.1501 1.0032 0 27530000 12474000 15056000 6311 716 2393 2458 9845;9846 9846 DVPLPVVR 8 0 1 Unmodified _DVPLPVVR_ 0 0 0 Q86U86;E7EVG2;H0Y5B5;Q9NUX9 Q86U86 Q86U86 PBRM1 Protein polybromo-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.7736 2 447.774003 893.533452 91751.31 0.39399 0.00017642 -0.025644 -1.1483E-05 0.36835 0.00016494 447.773917321889 452.778221592395 83.8 0.49625 83.8 83.531 84.027 -7.6294E-06 120 43 4 0 0 0 0.028567 1 51395 53.163 37.009 1 0.7006 0.70102 0 11418000 6583000 4835100 6312 1883 2394 2459 9847 9847 DVPLTAEEVEFVVEK 15 1 0 Unmodified _DVPLTAEEVEFVVEK_ 0 0 0 B7ZMF2;Q9NVI1;H3BP78;F8W7R3;B3KNW8;H3BN35;H3BT54;H3BMG4 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.4417 2 852.440543 1702.86653 NaN NaN NaN -0.70256 -0.00059889 NaN NaN NaN NaN 117.13 0.49126 117.13 116.88 117.38 0 0 0 0 0.00038708 1 76761 73.848 49.504 1 NaN NaN 0 6548100 6548100 0 6313 1116 2395 2460 9848 9848 DVPNETLQVEEDDRPELPWWK 21 1 1 Unmodified _DVPNETLQVEEDDRPELPWWK_ 0 0 1 O95373 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.0928 3 865.750242 2594.2289 67412.91 0.92769 0.00080315 -0.26258 -0.00022733 0.66511 0.00057582 866.419324269517 871.757451026846 112.67 0.34949 112.67 112.49 112.84 0 78 26 5 0 0 0 2.104E-05 1 71247 44.382 44.382 1 2.0373 2.2317 0 9042900 2916100 6126800 6314 1424 2396 2461 9849 9849 DVPNETLQVEEDDRPELPWWK 21 1 1 Unmodified _DVPNETLQVEEDDRPELPWWK_ 0 0 1 O95373 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.0927 3 865.750242 2594.2289 67554.07 0.95973 0.00083089 -0.40836 -0.00035353 0.55138 0.00047736 866.083633742749 872.091454215406 112.12 0.35794 112.12 111.98 112.34 0 83 27 6 0 0 0 2.6824E-07 1 72495 57.989 54.591 1 2.0976 2.3223 0 7853800 4034500 3819300 6315 1424 2396 2461 9850 9850 DVPVVAILGSGGGFR 15 0 1 Unmodified _DVPVVAILGSGGGFR_ 0 0 0 A8K2S1;P47712 A8K2S1 A8K2S1 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.9026 2 722.401358 1442.78816 71927.88 1.1012 0.00079551 -0.27732 -0.00020034 0.82388 0.00059517 722.401039249885 727.405255603057 121.68 0.58022 121.68 121.37 121.95 7.6294E-06 116 37 5 0 0 0 0.00022303 2 78650 68.44 57.917 1 3.629 3.8163 0 11386000 2610100 8776100 6316 712 2397 2462 9851;9852 9852 DVPVVAILGSGGGFR 15 0 1 Unmodified _DVPVVAILGSGGGFR_ 0 0 0 A8K2S1;P47712 A8K2S1 A8K2S1 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.405 2 722.401358 1442.78816 72629.15 1.0757 0.0007771 -0.49332 -0.00035638 0.5824 0.00042073 722.400172983644 727.405281858946 121.21 0.4656 121.21 120.97 121.44 0 106 28 7 0 0 0 3.2116E-06 2 80185 98.105 86.941 1 2.806 2.7714 0 14986000 3841100 11145000 6317 712 2397 2462 9853;9854 9853 DVPVVAILGSGGGFR 15 0 1 Unmodified _DVPVVAILGSGGGFR_ 0 0 0 A8K2S1;P47712 A8K2S1 A8K2S1 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.9063 2 722.401358 1442.78816 74179.96 0.87105 0.00062925 0.0014438 1.043E-06 0.8725 0.00063029 722.401554238663 727.40545811385 133.73 0.36993 133.73 133.57 133.94 0 64 14 6 0 0 0 0.00074542 1 81467 50.914 33.05 1 1.6368 1.4506 0 1239700 483210 756520 6318 712 2397 2462 9855 9855 DVPVVAILGSGGGFR 15 0 1 Unmodified _DVPVVAILGSGGGFR_ 0 0 0 A8K2S1;P47712 A8K2S1 A8K2S1 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.4025 2 722.401358 1442.78816 75331.17 1.1906 0.0008601 -0.4135 -0.00029872 0.77711 0.00056138 722.401452532475 727.405056338238 133.53 0.35791 133.53 133.33 133.69 0 46 13 5 0 0 0 0.0020864 1 80484 45.915 39.88 1 1.2492 1.0913 0 1419700 625630 794090 6319 712 2397 2462 9856 9856 DVQDELR 7 0 1 Unmodified _DVQDELR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.7207 2 437.716882 873.41921 88988.88 0.16867 7.3831E-05 -0.34646 -0.00015165 -0.17778 -7.7819E-05 437.716735645311 442.720812409862 32.169 0.43983 32.169 32.009 32.449 0 187 42 6 0 0 0 0.027041 2 15995 86.086 41.476 1 0.82208 0.95455 0 64084000 34640000 29444000 6320 69 2398 2463 9857;9858 9858 DVQDELR 7 0 1 Unmodified _DVQDELR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 442.7215 2 437.716882 873.41921 92402.27 -0.18742 -8.2036E-05 0.33504 0.00014665 0.14762 6.4615E-05 437.716936676424 442.721119922597 36.976 0.7294 36.976 36.709 37.439 0 273 61 6 0 0 0 0.043265 1 16570 58.167 27.499 1 1.9319 1.5944 0 18863000 6741300 12122000 6321 69 2398 2463 9859 9859 DVQDSLTVSNEAQTAK 16 1 0 Unmodified _DVQDSLTVSNEAQTAK_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.4146 2 853.415588 1704.81662 65976 0.59152 0.00050481 0.14072 0.0001201 0.73224 0.00062491 853.415077500793 857.423198319916 54.01 0.4952 54.01 53.831 54.327 0 176 40 6 0 0 0 1.7938E-12 2 30292 154.1 140.92 1 1.5444 1.5369 0 26210000 10971000 15239000 6322 43 2399 2464 9860;9861 9860 DVQDSLTVSNEAQTAK 16 1 0 Unmodified _DVQDSLTVSNEAQTAK_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 853.9172 2 853.415588 1704.81662 67068.44 0.42828 0.0003655 0.26035 0.00022219 0.68864 0.00058769 853.917584472735 857.422762744709 62.88 0.48687 62.88 62.633 63.12 0 134 44 5 0 0 0 0.043431 1 32306 32.068 32.068 1 2.8444 2.2561 0 4487600 1652200 2835400 6323 43 2399 2464 9862 9862 DVQDSLTVSNEAQTAK 16 1 0 Unmodified _DVQDSLTVSNEAQTAK_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 853.9177 2 853.415588 1704.81662 66456.64 0.38122 0.00032534 -0.27277 -0.00023279 0.10845 9.2556E-05 853.916874238799 857.422583713682 63.652 0.55684 63.652 63.351 63.908 -3.8147E-06 209 52 7 0 0 0 0.006635 1 32010 49.333 49.333 1 2.4994 1.9832 0 4006200 1219700 2786500 6324 43 2399 2464 9863 9863 DVQEIATVVVPK 12 1 0 Unmodified _DVQEIATVVVPK_ 0 0 0 A0A024RB76;Q9BRT6 A0A024RB76 A0A024RB76 C12orf31;LLPH Protein LLP homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.3793 2 649.371735 1296.72892 75948.23 0.95723 0.0006216 0.29858 0.00019389 1.2558 0.00081549 649.371716053065 653.379237420791 98.109 0.8148 98.109 97.787 98.602 0 334 66 6 0 0 0 2.4328E-05 2 59742 101.38 93.498 1 0.85802 0.96627 0 73987000 38553000 35434000 6325 327 2400 2465 9864;9865 9864 DVQEIATVVVPK 12 1 0 Unmodified _DVQEIATVVVPK_ 0 0 0 A0A024RB76;Q9BRT6 A0A024RB76 A0A024RB76 C12orf31;LLPH Protein LLP homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.3724 2 649.371735 1296.72892 76398.07 0.83015 0.00053908 0.32989 0.00021422 1.16 0.0007533 649.371780284083 653.379290313843 97.473 0.82652 97.473 97.145 97.971 0 346 64 8 0 0 0 2.5406E-05 1 60763 100.88 91.966 1 0.88765 0.99189 0 93667000 51805000 41862000 6326 327 2400 2465 9866 9866 DVQEIATVVVPK 12 1 0 Unmodified _DVQEIATVVVPK_ 0 0 0 A0A024RB76;Q9BRT6 A0A024RB76 A0A024RB76 C12orf31;LLPH Protein LLP homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.8736 2 649.371735 1296.72892 76033.27 0.90906 0.00059032 -0.12634 -8.2041E-05 0.78273 0.00050828 649.371641196795 653.378622256879 110.8 1.0136 110.8 110.42 111.43 0 216 45 8 0 0 0 0.00020462 2 63921 85.958 85.958 1 0.71288 0.55395 0 15141000 9180000 5960700 6327 327 2400 2465 9867;9868 9867 DVQEIATVVVPK 12 1 0 Unmodified _DVQEIATVVVPK_ 0 0 0 A0A024RB76;Q9BRT6 A0A024RB76 A0A024RB76 C12orf31;LLPH Protein LLP homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.3718 2 649.371735 1296.72892 75603.34 0.75602 0.00049094 -0.090581 -5.8821E-05 0.66544 0.00043212 649.371657720236 653.378616458547 110.69 0.89505 110.69 110.41 111.3 -7.6294E-06 235 45 8 0 0 0 0.00018714 2 62939 87.298 87.298 1 0.72116 0.57917 0 15051000 8741700 6309400 6328 327 2400 2465 9869;9870 9870 DVQEIFR 7 0 1 Unmodified _DVQEIFR_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;B4DIJ6;F6UJC5;A0A140TA18;B4DIZ8;O00148;B4DX78;K7EQN7;A0A024R7H0 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.7371 2 453.737617 905.460681 91366.29 -0.0060854 -2.7612E-06 0.14001 6.3528E-05 0.13393 6.0767E-05 453.737621312841 458.741767614845 67.195 0.92314 67.195 66.768 67.691 0 321 73 6 0 0 0 0.025781 2 38685 88.734 45.734 1 1.4628 1.4843 0 27959000 11886000 16073000 6329 1359;362 2401 2466 9871;9872 9871 DVQEIFR 7 0 1 Unmodified _DVQEIFR_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;B4DIJ6;F6UJC5;A0A140TA18;B4DIZ8;O00148;B4DX78;K7EQN7;A0A024R7H0 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.7371 2 453.737617 905.460681 91114.4 0.031559 1.4319E-05 -0.14856 -6.7406E-05 -0.117 -5.3086E-05 453.737525250808 458.741677497941 66.09 1.0205 66.09 65.715 66.735 7.6294E-06 302 85 5 0 0 0 0.027069 1 38909 86.866 43.866 1 1.4626 1.6019 0 31967000 13753000 18214000 6330 1359;362 2401 2466 9873 9873 DVQGTDASLDEELDR 15 0 1 Unmodified _DVQGTDASLDEELDR_ 0 0 0 Q9UJZ1;A0A087WYB4 Q9UJZ1 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 836.8799 2 831.876295 1661.73804 66571.04 0.6239 0.00051901 0.20844 0.0001734 0.83235 0.00069241 831.876626432192 836.880515324731 71.257 0.52789 71.257 70.981 71.509 0 98 44 4 0 0 0 0.00018754 3 41410 77.185 72.669 1 1.3157 1.3775 0 10856000 3649500 7206300 6331 2104 2402 2467 9874;9875;9876 9874 DVQGWGENDR 10 0 1 Unmodified _DVQGWGENDR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;V9HW04;P62140;B4DJ75;B7ZB67 P62136;V9HW04 P62136 PPP1CA;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.6038 2 588.257434 1174.50031 79943.56 1.0132 0.00059601 -0.17281 -0.00010165 0.84037 0.00049436 588.257284214855 593.26120791429 33.393 0.94505 33.393 32.93 33.875 0 308 93 4 0 0 0 0.046819 1 16523 62.823 62.823 1 0.88709 0.9164 0 23771000 12392000 11379000 6332 1632;1633 2403 2468 9877 9877 DVQGWGENDR 10 0 1 Unmodified _DVQGWGENDR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;V9HW04;P62140;B4DJ75;B7ZB67 P62136;V9HW04 P62136 PPP1CA;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.802 2 588.257434 1174.50031 79629.48 0.62353 0.0003668 -0.0161 -9.471E-06 0.60743 0.00035733 588.257462235089 593.261258297868 32.828 1.0866 32.828 32.235 33.321 0 301 100 4 0 0 0 0.046819 1 16311 62.823 58.889 1 0.82956 0.89098 0 25491000 14087000 11404000 6333 1632;1633 2403 2468 9878 9878 DVQGWGENDR 10 0 1 Unmodified _DVQGWGENDR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;V9HW04;P62140;B4DJ75;B7ZB67 P62136;V9HW04 P62136 PPP1CA;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.262 2 588.257434 1174.50031 79066.07 0.5136 0.00030213 0.023322 1.3719E-05 0.53692 0.00031585 588.257365908872 593.261402069287 37.983 1.3201 37.983 37.333 38.653 0 498 100 6 0 0 0 0.0027411 2 16936 67.704 65.838 1 1.7542 1.5063 0 8126200 2847500 5278700 6334 1632;1633 2403 2468 9879;9880 9879 DVQGWGENDR 10 0 1 Unmodified _DVQGWGENDR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;V9HW04;P62140;B4DJ75;B7ZB67 P62136;V9HW04 P62136 PPP1CA;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.262 2 588.257434 1174.50031 78161.47 0.31939 0.00018788 0.32391 0.00019054 0.6433 0.00037843 588.257565980303 593.261567240686 38.039 1.2427 38.039 37.462 38.705 -3.8147E-06 473 98 6 0 0 0 0.002232 1 16508 70.028 66.094 1 1.725 1.4106 0 9135800 3597900 5537900 6335 1632;1633 2403 2468 9881 9881 DVQIGDIVTVGECR 14 0 1 Unmodified _DVQIGDIVTVGECR_ 0 0 0 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.8907 2 780.887955 1559.76136 69693.42 0.95339 0.00074449 -0.13314 -0.00010397 0.82025 0.00064052 780.88836262394 785.891732847984 102.25 0.64836 102.25 101.89 102.54 0 196 53 6 0 0 0 1.2548E-10 2 62803 124.86 124.86 1 0.8095 0.83589 0 23896000 10531000 13365000 6336 1641 2404 2469 9882;9883 9882 DVQIGDIVTVGECR 14 0 1 Unmodified _DVQIGDIVTVGECR_ 0 0 0 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.8922 2 780.887955 1559.76136 69714.5 0.65198 0.00050913 -0.20718 -0.00016178 0.4448 0.00034734 780.88807016049 785.891744900584 101.57 0.67902 101.57 101.32 102 7.6294E-06 219 54 6 0 0 0 7.8652E-10 2 63906 122.45 122.45 1 0.80361 0.92635 0 72540000 40042000 32498000 6337 1641 2404 2469 9884;9885 9884 DVQIGDIVTVGECR 14 0 1 Unmodified _DVQIGDIVTVGECR_ 0 0 0 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 785.8926 2 780.887955 1559.76136 69759.55 1.1152 0.00087087 0.095662 7.4701E-05 1.2109 0.00094558 780.887654924485 785.891837641777 114.06 0.60606 114.06 113.7 114.31 -7.6294E-06 186 26 11 0 0 0 0.0012489 1 66517 55.04 55.04 1 0.96853 0.79824 0 11666000 6508000 5158300 6338 1641 2404 2469 9886 9886 DVQIGDIVTVGECR 14 0 1 Unmodified _DVQIGDIVTVGECR_ 0 0 0 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 785.8922 2 780.887955 1559.76136 69751.13 0.7138 0.0005574 0.31973 0.00024968 1.0335 0.00080707 780.88811060832 785.892107846781 113.94 0.70598 113.94 113.59 114.3 -7.6294E-06 189 31 10 0 0 0 2.025E-09 2 65561 117.93 117.93 1 1.0158 0.86969 0 20755000 10252000 10503000 6339 1641 2404 2469 9887;9888 9887 DVQIGDIVTVGECRPLSK 18 1 1 Unmodified _DVQIGDIVTVGECRPLSK_ 0 0 1 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 993.5232 2 993.519864 1985.02518 60227.86 0.49124 0.00048806 -0.17304 -0.00017192 0.3182 0.00031614 994.02134851225 1002.53105347863 98.018 0.91428 98.018 97.535 98.449 0 587 74 11 0 0 0 5.7197E-07 3 59547 101.62 101.62 1 0.82077 0.99639 0 361210000 204120000 157090000 6340 1641 2405 2470 9889;9890;9891 9890 DVQIGDIVTVGECRPLSK 18 1 1 Unmodified _DVQIGDIVTVGECRPLSK_ 0 0 1 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.6899 3 662.682335 1985.02518 73508.02 0.82547 0.00054703 -0.23507 -0.00015578 0.5904 0.00039125 663.01657019794 668.689772934937 98.019 0.95406 98.019 97.495 98.449 0 591 77 10 0 0 0 5.3649E-06 2 59694 81.317 77.877 1 0.82522 1.0009 0 317140000 174840000 142300000 6341 1641 2405 2470 9892;9893 9893 DVQIGDIVTVGECRPLSK 18 1 1 Unmodified _DVQIGDIVTVGECRPLSK_ 0 0 1 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 993.5211 2 993.519864 1985.02518 60121.56 0.72049 0.00071582 -0.17546 -0.00017432 0.54504 0.0005415 994.021257593063 1002.53110553642 97.217 0.91187 97.217 96.799 97.711 0 542 71 11 0 0 0 7.9278E-11 2 60480 114.69 114.69 1 0.83086 0.98645 0 325860000 183420000 142440000 6342 1641 2405 2470 9894;9895 9895 DVQIGDIVTVGECRPLSK 18 1 1 Unmodified _DVQIGDIVTVGECRPLSK_ 0 0 1 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.69 3 662.682335 1985.02518 73025.67 0.90356 0.00059877 -0.058138 -3.8527E-05 0.84542 0.00056025 663.016673017011 668.689894880431 97.222 1.3817 97.222 96.742 98.123 -7.6294E-06 530 68 10 0 0 0 1.81E-06 2 60532 81.317 76.108 1 0.81675 0.97019 0 352890000 197760000 155130000 6343 1641 2405 2470 9896;9897 9896 DVQIGDIVTVGECRPLSK 18 1 1 Unmodified _DVQIGDIVTVGECRPLSK_ 0 0 1 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1003.0338 2 993.519864 1985.02518 60290.54 0.42576 0.000423 -0.21313 -0.00021175 0.21262 0.00021125 994.021390938393 1002.5310517591 110.34 1.374 110.34 110.06 111.43 0 446 65 14 0 0 0 7.6974E-05 2 63584 87.932 87.932 1 1.0595 0.9726 0 290930000 148210000 142720000 6344 1641 2405 2470 9898;9899 9898 DVQIGDIVTVGECRPLSK 18 1 1 Unmodified _DVQIGDIVTVGECRPLSK_ 0 0 1 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.6906 3 662.682335 1985.02518 72267.98 0.76764 0.0005087 -0.26212 -0.0001737 0.50552 0.000335 663.016706465921 668.689773199043 110.37 1.2406 110.37 109.92 111.16 7.6294E-06 390 60 11 0 0 0 2.3514E-09 2 63651 79.97 76.25 1 1.0006 0.91313 0 216010000 113860000 102140000 6345 1641 2405 2470 9900;9901 9900 DVQIGDIVTVGECRPLSK 18 1 1 Unmodified _DVQIGDIVTVGECRPLSK_ 0 0 1 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1002.5296 2 993.519864 1985.02518 60078.5 0.38017 0.00037771 -0.24591 -0.00024432 0.13426 0.00013339 994.021355420792 1002.53102649481 110.23 0.91901 110.23 109.93 110.85 0 419 48 15 0 0 0 0.00012895 3 62573 70.26 70.26 1 0.94847 0.81585 0 340620000 178780000 161830000 6346 1641 2405 2470 9902;9903;9904 9902 DVQIGDIVTVGECRPLSK 18 1 1 Unmodified _DVQIGDIVTVGECRPLSK_ 0 0 1 P62280;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.6831 3 662.682335 1985.02518 72746.02 0.75574 0.00050081 -0.2373 -0.00015726 0.51843 0.00034356 663.016731288683 668.68975834074 110.23 1.1673 110.23 109.82 110.99 0 367 62 11 0 0 0 0.00012986 1 62705 47.047 47.047 1 0.97966 0.8405 0 199580000 103650000 95931000 6347 1641 2405 2470 9905 9905 DVQSPGFLNEPLSSK 15 1 0 Unmodified _DVQSPGFLNEPLSSK_ 0 0 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.4116 2 809.409577 1616.8046 69263.79 1.1803 0.00095532 -0.38851 -0.00031446 0.79176 0.00064086 809.409028552851 813.416662766236 91.233 0.50403 91.233 90.945 91.449 0 180 40 7 0 0 0 8.0703E-05 3 55259 83.617 83.617 1 0.74474 0.73045 0 22691000 13574000 9116600 6348 1928 2406 2471 9906;9907;9908 9908 DVQSPGFLNEPLSSK 15 1 0 Unmodified _DVQSPGFLNEPLSSK_ 0 0 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.9125 2 809.409577 1616.8046 67690.46 1.153 0.00093324 0.093574 7.5739E-05 1.2466 0.001009 809.40924619371 813.416950588509 90.433 0.4842 90.433 90.185 90.669 0 207 41 8 0 0 0 2.4507E-05 2 55912 87.001 87.001 1 0.72554 0.78441 0 22536000 13476000 9060400 6349 1928 2406 2471 9909;9910 9910 DVQSPGFLNEPLSSK 15 1 0 Unmodified _DVQSPGFLNEPLSSK_ 0 0 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.9125 2 809.409577 1616.8046 68331.66 0.59752 0.00048364 0.094742 7.6685E-05 0.69226 0.00056032 809.4099194461 813.416597297409 103.67 0.72165 103.67 103.29 104.01 7.6294E-06 178 45 5 0 0 0 0.00031323 2 58894 60.157 60.157 1 1.1184 0.88118 0 5641200 2622500 3018800 6350 1928 2406 2471 9911;9912 9912 DVQSPGFLNEPLSSK 15 1 0 Unmodified _DVQSPGFLNEPLSSK_ 0 0 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 813.4177 2 809.409577 1616.8046 68359.82 0.39272 0.00031787 0.50486 0.00040864 0.89758 0.00072651 809.409876717515 813.41696445589 103.58 0.81593 103.58 103.16 103.97 -7.6294E-06 228 55 6 0 0 0 0.0067992 1 57892 36.32 33.701 1 1.1213 0.91982 0 5299500 2302600 2996900 6351 1928 2406 2471 9913 9913 DVQTALALAK 10 1 0 Unmodified _DVQTALALAK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.3082 2 515.300581 1028.58661 86280.72 0.51973 0.00026782 -0.059075 -3.0441E-05 0.46066 0.00023738 515.300281061241 519.307656530394 76.219 0.85133 76.219 75.731 76.582 0 273 69 6 0 0 0 0.0022766 2 44686 69.825 33.945 1 1.6791 1.7681 0 30696000 12619000 18077000 6352 555 2407 2472 9914;9915 9914 DVQTALALAK 10 1 0 Unmodified _DVQTALALAK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.3006 2 515.300581 1028.58661 86081.11 0.33177 0.00017096 -0.10026 -5.1666E-05 0.2315 0.00011929 515.300485100407 519.307639084869 86.502 0.70687 86.502 86.087 86.794 0 169 48 6 0 0 0 0.004316 2 47433 61.679 34.125 1 1.2848 1.0413 0 2736500 1160100 1576400 6353 555 2407 2472 9916;9917 9917 DVQTALALAK 10 1 0 Unmodified _DVQTALALAK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.3077 2 515.300581 1028.58661 86117 0.30755 0.00015848 0.068045 3.5064E-05 0.3756 0.00019355 515.300546636235 519.307711168039 86.712 0.6702 86.712 86.344 87.014 0 166 44 6 0 0 0 0.0063002 2 46692 58.981 28.796 1 1.2526 0.99722 0 2385900 1176600 1209300 6354 555 2407 2472 9918;9919 9918 DVSSVELLMNNHQGIK 16 1 0 Oxidation (M) _DVSSVELLM(ox)NNHQGIK_ DVSSVELLM(1)NNHQGIK DVSSVELLM(44.3)NNHQGIK 0 1 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.9588 2 900.45145 1798.88835 NaN NaN NaN 0.41631 0.00037487 NaN NaN NaN NaN 67.725 0.3891 67.725 67.592 67.981 7.6294E-06 0 0 0 0.004179 1 40176 44.299 30.872 1 NaN NaN 0 2852300 0 2852300 6355 415 2408 2473 9920 9920 300 DVTEAEQAEEQAR 13 0 1 Unmodified _DVTEAEQAEEQAR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.3373 2 738.334066 1474.65358 70641.08 1.0294 0.00076004 0.11221 8.285E-05 1.1416 0.00084289 738.334097838381 743.338257945478 32.173 0.71243 32.173 31.8 32.512 0 396 66 8 0 0 0 1.8059E-38 2 15774 176.95 176.95 1 0.85422 0.94883 0 71743000 39062000 32681000 6356 1698 2409 2474 9921;9922 9922 DVTEAEQAEEQAR 13 0 1 Unmodified _DVTEAEQAEEQAR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3349 2 738.334066 1474.65358 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.529 1 32.529 32.029 33.029 0 0 0 0 1.147E-10 1 16142 115.18 84.921 1 6357 1698 2409 2474 9923 9923 DVTEAEQAEEQAR 13 0 1 Unmodified _DVTEAEQAEEQAR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.3388 2 738.334066 1474.65358 70765.58 1.0833 0.00079983 -0.072567 -5.3579E-05 1.0107 0.00074626 738.333993360091 743.338208521615 31.627 0.69371 31.627 31.208 31.902 0 361 61 8 0 0 0 6.9545E-49 2 15494 192.44 192.44 1 0.87262 1.0007 0 81754000 45016000 36738000 6358 1698 2409 2474 9924;9925 9925 DVTEAEQAEEQAR 13 0 1 Unmodified _DVTEAEQAEEQAR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.3386 2 738.334066 1474.65358 70305.95 0.62789 0.0004636 -0.098225 -7.2523E-05 0.52967 0.00039107 738.334040451613 743.338091948915 37.617 0.82103 37.617 37.306 38.127 0 332 65 8 0 0 0 1.4396E-19 2 16871 149.33 149.33 1 1.166 0.96445 0 19589000 8896000 10693000 6359 1698 2409 2474 9926;9927 9927 DVTEAEQAEEQAR 13 0 1 Unmodified _DVTEAEQAEEQAR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 743.3385 2 738.334066 1474.65358 70136.67 0.44966 0.000332 0.20866 0.00015406 0.65833 0.00048606 738.334159581884 743.338348276904 38.019 0.75365 38.019 37.671 38.424 3.8147E-06 346 59 8 0 0 0 3.7855E-30 2 16619 166.69 166.69 1 1.2299 1.0355 0 17415000 7616100 9799000 6360 1698 2409 2474 9928;9929 9929 DVTEAEQAEEQARQEEQVVR 20 0 2 Unmodified _DVTEAEQAEEQARQEEQVVR_ 0 0 1 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.3749 3 782.038563 2343.09386 68529.72 0.68823 0.00053822 -0.74331 -0.0005813 -0.05508 -4.3075E-05 782.373112915082 789.376091285174 69.097 0.75876 69.097 68.644 69.403 0 292 65 9 0 0 0 8.7445E-05 3 40006 47.754 47.754 1 1.0199 1.1078 0 34753000 15342000 19411000 6361 1698 2410 2475 9930;9931;9932 9931 DVTEAEQAEEQARQEEQVVR 20 0 2 Unmodified _DVTEAEQAEEQARQEEQVVR_ 0 0 1 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.3723 3 782.038563 2343.09386 68545.76 0.64384 0.00050351 -0.71094 -0.00055598 -0.067095 -5.2471E-05 782.372017709548 789.04533090285 68.077 0.48779 68.077 67.845 68.333 0 210 40 10 0 0 0 2.7745E-09 2 40327 92.307 92.307 1 1.1548 1.2943 0 27162000 13477000 13685000 6362 1698 2410 2475 9933;9934 9934 DVTEAEQAEEQARQEEQVVR 20 0 2 Unmodified _DVTEAEQAEEQARQEEQVVR_ 0 0 1 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.0451 3 782.038563 2343.09386 66717.02 0.45307 0.00035432 -0.10428 -8.1553E-05 0.34879 0.00027276 782.372536501107 789.045199024553 80.168 0.66472 80.168 79.884 80.548 -7.6294E-06 294 44 12 0 0 0 3.081E-13 2 43363 88.264 88.264 1 1.2416 1.0203 0 28724000 12764000 15960000 6363 1698 2410 2475 9935;9936 9936 DVTEAEQAEEQARQEEQVVR 20 0 2 Unmodified _DVTEAEQAEEQARQEEQVVR_ 0 0 1 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.7119 3 782.038563 2343.09386 67793.52 0.6081 0.00047556 0.097551 7.6288E-05 0.70565 0.00055184 782.372939947291 788.710809599311 80.539 0.57704 80.539 80.29 80.867 0 266 40 8 0 0 0 1.0634E-06 2 42788 60.034 56.529 1 1.1416 1.0582 0 22834000 9064000 13770000 6364 1698 2410 2475 9937;9938 9938 DVTGAEALLER 11 0 1 Unmodified _DVTGAEALLER_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.3136 2 587.309135 1172.60372 79971.16 0.92989 0.00054613 0.54121 0.00031786 1.4711 0.00086399 587.309045202132 592.313232225416 84.549 0.56802 84.549 84.259 84.827 0 173 45 5 0 0 0 0.00029522 2 50586 88.681 73.743 1 1.4684 1.5309 0 21504000 8917100 12587000 6365 523 2411 2476 9939;9940 9939 DVTGAEALLER 11 0 1 Unmodified _DVTGAEALLER_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.3142 2 587.309135 1172.60372 79420.27 0.89035 0.00052291 0.55738 0.00032735 1.4477 0.00085026 587.309061260639 592.313413185433 83.642 0.64144 83.642 83.386 84.027 0 188 53 6 0 0 0 2.2587E-08 1 51194 121.83 98.307 1 1.3987 1.5205 0 28558000 12149000 16409000 6366 523 2411 2476 9941 9941 DVTGAEALLER 11 0 1 Unmodified _DVTGAEALLER_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.3149 2 587.309135 1172.60372 NaN NaN NaN 0.055472 3.2579E-05 NaN NaN NaN NaN 96.285 0.59629 96.285 96.042 96.638 0 0 0 0 0.012039 1 53157 56.548 40.345 1 NaN NaN 0 1735900 0 1735900 6367 523 2411 2476 9942 9942 DVTGAEALLER 11 0 1 Unmodified _DVTGAEALLER_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.3091 2 587.309135 1172.60372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.33 1 96.33 95.83 96.83 0 0 0 0 0.026999 1 53244 50.353 25.431 1 6368 523 2411 2476 9943 9943 DVTILAATNRPDR 13 0 2 Unmodified _DVTILAATNRPDR_ 0 0 1 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.9012 2 721.391522 1440.76849 72041.59 0.7445 0.00053708 0.12806 9.2379E-05 0.87256 0.00062945 721.392021639398 731.399793789162 55.646 0.42639 55.646 55.423 55.849 0 83 33 4 0 0 0 0.00069311 1 31250 79.07 61.206 1 1.0559 1.1545 0 13189000 5387400 7801600 6369 1919 2412 2477 9944 9944 DVTVLSVAEEQDLLK 15 1 0 Unmodified _DVTVLSVAEEQDLLK_ 0 0 0 Q14966;A0A096LPK8;Q57Z90 Q14966 Q14966 ZNF638;NP220 Zinc finger protein 638 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.9474 2 829.945992 1657.87743 67361.77 0.8996 0.00074662 0.19618 0.00016282 1.0958 0.00090944 829.94564096182 834.454806967941 118.08 0.50909 118.08 117.83 118.34 0 109 29 6 0 0 0 0.00022478 1 75650 71.153 54.9 1 1.6781 1.7036 0 10262000 4950500 5311800 6370 1746 2413 2478 9945 9945 DVTVLSVAEEQDLLK 15 1 0 Unmodified _DVTVLSVAEEQDLLK_ 0 0 0 Q14966;A0A096LPK8;Q57Z90 Q14966 Q14966 ZNF638;NP220 Zinc finger protein 638 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.4483 2 829.945992 1657.87743 69056.95 1.1611 0.00096365 -0.018719 -1.5536E-05 1.1424 0.00094811 830.447331758928 834.454902200077 117.68 0.43734 117.68 117.41 117.85 -7.6294E-06 98 27 5 0 0 0 1.6472E-10 2 77216 121.02 94.348 1 1.4648 1.5347 0 10725000 4046500 6678900 6371 1746 2413 2478 9946;9947 9947 DVVEPLLRPQWYVR 14 0 2 Unmodified _DVVEPLLRPQWYVR_ 0 0 1 A0A024RCN6;P26640;A0A140T936;B4DT32 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.6613 3 590.661423 1768.96244 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.01 1 119.01 118.51 119.51 0 0 0 0 0.052126 1 69502 25.322 14.06 1 6372 363 2414 2479 9948 9948 DVVMEPTMK 9 1 0 2 Oxidation (M) _DVVM(ox)EPTM(ox)K_ DVVM(1)EPTM(1)K DVVM(58.98)EPTM(58.98)K 0 2 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.2494 2 541.248843 1080.48313 79231.12 0.3796 0.00020546 0.2691 0.00014565 0.6487 0.00035111 541.249213453384 545.255966720373 24.643 0.82819 24.643 24.26 25.088 -1.9073E-06 130 38 5 0 0 0 0.012864 2 10363 58.981 52.255 1 1.1238 1.1025 0 22798000 10194000 12604000 6373 2023 2415 2480 9949;9950 9950 1858;1859 DVVMEPTMK 9 1 0 2 Oxidation (M) _DVVM(ox)EPTM(ox)K_ DVVM(1)EPTM(1)K DVVM(60.02)EPTM(60.02)K 0 2 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.2565 2 541.248843 1080.48313 82378.94 0.45739 0.00024756 0.38111 0.00020627 0.83849 0.00045383 541.249398121932 545.255891900747 24.401 0.87064 24.401 23.987 24.857 1.9073E-06 127 39 5 0 0 0 0.011489 2 10083 60.019 51.061 1 0.99912 1.0079 0 26925000 9788800 17136000 6374 2023 2415 2480 9951;9952 9951 1858;1859 DVVMVGLGDHQFQMQLLQR 19 0 1 2 Oxidation (M) _DVVM(ox)VGLGDHQFQM(ox)QLLQR_ DVVM(1)VGLGDHQFQM(1)QLLQR DVVM(73.11)VGLGDHQFQM(73.11)QLLQR 0 2 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.7113 3 749.373396 2245.09836 NaN NaN NaN -0.25952 -0.00019448 NaN NaN NaN NaN 98.182 0.59767 98.182 97.925 98.523 0 0 0 0 5.1129E-07 1 59961 73.11 64.922 1 NaN NaN 0 11018000 0 11018000 6375 1887 2416 2481 9953 9953 1731;1732 DVVMVGLGDHQFQMQLLQR 19 0 1 2 Oxidation (M) _DVVM(ox)VGLGDHQFQM(ox)QLLQR_ DVVM(1)VGLGDHQFQM(1)QLLQR DVVM(75.68)VGLGDHQFQM(75.68)QLLQR 0 2 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.0453 3 749.373396 2245.09836 70675.76 0.68843 0.00051589 -0.15933 -0.00011939 0.52911 0.0003965 749.707594320121 753.043982656006 97.48 0.54634 97.48 97.231 97.777 0 152 42 5 0 0 0 3.657E-06 1 60879 75.682 75.682 1 2.6358 2.8779 0 39082000 10093000 28989000 6376 1887 2416 2481 9954 9954 1731;1732 DVVMVHEPK 9 1 0 Oxidation (M) _DVVM(ox)VHEPK_ DVVM(1)VHEPK DVVM(96.95)VHEPK 0 1 0 B0AZS5;O00139;B4DM85;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.2783 2 535.270967 1068.52738 NaN NaN NaN -0.34406 -0.00018416 NaN NaN NaN NaN 27.037 0.45018 27.037 26.806 27.256 0 0 0 0 4.2051E-05 1 12249 96.948 67.786 1 NaN NaN 0 9980900 0 9980900 6377 804 2417 2482 9955 9955 644 DVVMVHEPK 9 1 0 Oxidation (M) _DVVM(ox)VHEPK_ DVVM(1)VHEPK DVVM(94.69)VHEPK 0 1 0 B0AZS5;O00139;B4DM85;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.2775 2 535.270967 1068.52738 NaN NaN NaN -0.27773 -0.00014866 NaN NaN NaN NaN 26.564 0.43345 26.564 26.267 26.701 0 0 0 0 5.0076E-05 1 11882 94.692 72.606 1 NaN NaN 0 19328000 0 19328000 6378 804 2417 2482 9956 9956 644 DVVQAYPEVR 10 0 1 Unmodified _DVVQAYPEVR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.3112 2 588.306395 1174.59824 NaN NaN NaN -0.41204 -0.0002424 NaN NaN NaN NaN 58.747 1.0167 58.747 58.46 59.476 -3.8147E-06 0 0 0 0.00035698 1 33301 91.867 58.974 1 NaN NaN 0 201160000 0 201160000 6379 1691 2418 2483 9957 9957 DVVQAYPEVR 10 0 1 Unmodified _DVVQAYPEVR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.3107 2 588.306395 1174.59824 78470.46 0.50419 0.00029662 0.21594 0.00012704 0.72013 0.00042366 588.306452267366 593.3105427285 67.926 0.95303 67.926 67.474 68.427 0 301 52 9 0 0 0 0.011008 1 35318 52.579 52.579 1 1.3878 1.1635 0 25510000 10762000 14748000 6380 1691 2418 2483 9958 9958 DVVQAYPEVR 10 0 1 Unmodified _DVVQAYPEVR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.3066 2 588.306395 1174.59824 78960.55 0.44549 0.00026208 0.28089 0.00016525 0.72638 0.00042733 588.306457081439 593.310442628074 68.497 0.96311 68.497 68.051 69.014 0 319 69 9 0 0 0 0.0034095 2 34898 64.654 51.864 1 1.4431 1.2445 0 22443000 9560000 12883000 6381 1691 2418 2483 9959;9960 9960 DVVSSLR 7 0 1 Unmodified _DVVSSLR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.223 2 388.21906 774.423567 NaN NaN NaN -0.084163 -3.2674E-05 NaN NaN NaN NaN 42.52 0.51217 42.52 42.305 42.817 0 0 0 0 0.045012 1 22627 60.788 27.05 1 NaN NaN 0 28996000 0 28996000 6382 493 2419 2484 9961 9961 DVVSSLR 7 0 1 Unmodified _DVVSSLR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 388.2207 2 388.21906 774.423567 97328.45 0.5587 0.0002169 0.45477 0.00017655 1.0135 0.00039345 388.219140448711 393.223191685866 41.397 0.41546 41.397 41.217 41.633 0 105 34 4 0 0 0 0.026873 1 22186 81.381 31.262 1 0.75985 0.87275 0 52557000 25674000 26883000 6383 493 2419 2484 9962 9962 DVVSSLR 7 0 1 Unmodified _DVVSSLR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 393.2232 2 388.21906 774.423567 95032.65 0.012763 4.9548E-06 0.22796 8.8497E-05 0.24072 9.3452E-05 388.218975281482 393.223257795415 48.151 0.45747 48.151 47.854 48.311 0 98 31 4 0 0 0 0.034211 1 23408 62.714 27.609 1 1.1295 0.97098 0 6637800 3414400 3223400 6384 493 2419 2484 9963 9963 DVVSSLRR 8 0 2 Unmodified _DVVSSLRR_ 0 0 1 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.2772 2 466.269616 930.524678 NaN NaN NaN 1.0208 0.00047597 NaN NaN NaN NaN 29.575 0.46574 29.575 29.479 29.945 0 0 0 0 0.036753 1 14333 55.531 24.918 1 NaN NaN 0 6169600 0 6169600 6385 493 2420 2485 9964 9964 DVVSSLRR 8 0 2 Unmodified _DVVSSLRR_ 0 0 1 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 476.2768 2 466.269616 930.524678 91972.5 0.25008 0.00011661 -0.13372 -6.2347E-05 0.11637 5.4259E-05 466.269599404322 476.277701017702 34.053 0.48914 34.053 33.792 34.281 0 145 43 5 0 0 0 0.02126 1 14462 67.032 44.901 1 1.2712 1.1507 0 4579900 2032600 2547200 6386 493 2420 2485 9965 9965 DVWGIEGPIDAAFTR 15 0 1 Unmodified _DVWGIEGPIDAAFTR_ 0 0 0 CON__Q3ZBS7;B7Z553;D9ZGG2;P04004 CON__Q3ZBS7 CON__Q3ZBS7 VTN Vitronectin;Vitronectin V65 subunit;Vitronectin V10 subunit;Somatomedin-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.9131 2 823.912287 1645.81002 NaN NaN NaN 0.29309 0.00024148 NaN NaN NaN NaN 124.86 0.60017 124.86 124.57 125.18 7.6294E-06 0 0 0 9.957E-07 2 81067 93.766 77.628 1 NaN NaN 0 16825000 16825000 0 + 6387 1173 2421 2486 9966;9967 9966 DVWGIEGPIDAAFTR 15 0 1 Unmodified _DVWGIEGPIDAAFTR_ 0 0 0 CON__Q3ZBS7;B7Z553;D9ZGG2;P04004 CON__Q3ZBS7 CON__Q3ZBS7 VTN Vitronectin;Vitronectin V65 subunit;Vitronectin V10 subunit;Somatomedin-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.9132 2 823.912287 1645.81002 NaN NaN NaN -0.085046 -7.007E-05 NaN NaN NaN NaN 124.54 0.5984 124.54 124.24 124.83 0 0 0 0 6.8058E-06 1 82758 91.858 81.106 1 NaN NaN 0 18027000 18027000 0 + 6388 1173 2421 2486 9968 9968 DVYAVLQLEAEEK 13 1 0 Unmodified _DVYAVLQLEAEEK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.8952 2 753.887946 1505.76134 69601.74 0.96403 0.00072677 0.043525 3.2813E-05 1.0076 0.00075959 753.887692252467 757.895016366093 108.47 1.0313 108.47 108.09 109.12 7.6294E-06 346 71 8 0 0 0 4.9147E-06 2 67581 106.49 90.953 1 0.74988 0.82363 0 53827000 32175000 21652000 6389 899;1099 2422 2487 9969;9970 9970 DVYAVLQLEAEEK 13 1 0 Unmodified _DVYAVLQLEAEEK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.8879 2 753.887946 1505.76134 70094.78 0.72109 0.00054362 -0.36309 -0.00027373 0.358 0.00026989 753.88768454254 757.894888973319 107.96 1.0603 107.96 107.59 108.65 7.6294E-06 396 74 8 0 0 0 1.1427E-08 2 68830 113.63 97.74 1 0.7546 0.8124 0 37794000 21084000 16709000 6390 899;1099 2422 2487 9971;9972 9971 DVYAVLQLEAEEK 13 1 0 Unmodified _DVYAVLQLEAEEK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.8956 2 753.887946 1505.76134 69767.38 0.99581 0.00075073 -0.11986 -9.0361E-05 0.87595 0.00066037 753.887803515695 757.894824874692 119.54 0.71688 119.54 119.25 119.97 0 170 32 8 0 0 0 4.1448E-09 3 70713 121.08 104.7 1 1.1418 0.91566 0 21143000 9649100 11494000 6391 899;1099 2422 2487 9973;9974;9975 9973 DVYAVLQLEAEEK 13 1 0 Unmodified _DVYAVLQLEAEEK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.8884 2 753.887946 1505.76134 70258 0.60376 0.00045517 0.0312 2.3521E-05 0.63496 0.00047869 753.887926196695 757.895115540254 119.36 0.80471 119.36 119.11 119.92 0 173 35 8 0 0 0 0.00014499 2 69728 88.187 74.524 1 1.1803 0.94564 0 20064000 8784400 11280000 6392 899;1099 2422 2487 9976;9977 9976 DVYVQLYLQHLTAR 14 0 1 Unmodified _DVYVQLYLQHLTAR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 859.9655 2 859.964854 1717.91515 65161.47 0.85321 0.00073373 -0.11639 -0.00010009 0.73682 0.00063364 859.964893816433 864.969449581775 110.08 0.58077 110.08 109.73 110.31 0 130 35 5 0 0 0 8.8357E-05 3 68887 87.216 87.216 1 0.7587 0.8408 0 64752000 36770000 27982000 6393 334;1562 2423 2488 9978;9979;9980 9978 DVYVQLYLQHLTAR 14 0 1 Unmodified _DVYVQLYLQHLTAR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.6456 3 573.645661 1717.91515 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.17 1 109.17 108.67 109.67 -7.6294E-06 0 0 0 0.0050285 1 70024 69.92 51.189 1 6394 334;1562 2423 2488 9981 9981 DVYVQLYLQHLTAR 14 0 1 Unmodified _DVYVQLYLQHLTAR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 864.97 2 859.964854 1717.91515 64427.71 0.57593 0.00049528 0.11899 0.00010233 0.69492 0.0005976 860.466784043982 864.969309779628 120.64 0.94838 120.64 120.36 121.31 0 146 44 6 0 0 0 0.00011593 2 71537 82.543 82.543 1 0.94186 0.7757 0 18190000 8334100 9855800 6395 334;1562 2423 2488 9982;9983 9982 DVYVQLYLQHLTAR 14 0 1 Unmodified _DVYVQLYLQHLTAR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.6455 3 573.645661 1717.91515 80799.92 0.47255 0.00027108 0.11665 6.6916E-05 0.5892 0.00033799 573.980067621136 576.981923266583 120.59 0.3409 120.59 120.4 120.74 0 49 15 5 0 0 0 0.00090185 1 71618 40.941 40.941 1 1.4431 1.2158 0 4662200 2313800 2348400 6396 334;1562 2423 2488 9984 9984 DVYVQLYLQHLTAR 14 0 1 Unmodified _DVYVQLYLQHLTAR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.9803 3 573.645661 1717.91515 80586.75 0.70377 0.00040372 -0.079343 -4.5515E-05 0.62443 0.0003582 573.645461013862 576.981603030001 120.31 0.3455 120.31 120.16 120.51 7.6294E-06 74 19 6 0 0 0 0.014808 2 70509 22.857 22.857 1 1.1866 1.0354 0 4240800 2579700 1661100 6397 334;1562 2423 2488 9985;9986 9986 DVYVQLYLQHLTAR 14 0 1 Unmodified _DVYVQLYLQHLTAR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 859.9655 2 859.964854 1717.91515 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.28 1 120.28 119.78 120.78 0 0 0 0 0.0021524 1 70497 79.466 53.423 1 6398 334;1562 2423 2488 9987 9987 DWDELEEEAR 10 0 1 Unmodified _DWDELEEEAR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.2787 2 646.275489 1290.53642 76514.94 0.53673 0.00034688 -0.01782 -1.1517E-05 0.51891 0.00033536 646.275584859425 651.279375472393 77.35 0.79036 77.35 76.982 77.773 0 284 65 6 0 0 0 0.00013082 1 45588 96.331 94.728 1 0.68844 0.71659 0 21873000 13027000 8846900 6399 2148 2424 2489 9988 9988 DWDELEEEAR 10 0 1 Unmodified _DWDELEEEAR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.2758 2 646.275489 1290.53642 76875.16 0.33557 0.00021687 0.2401 0.00015517 0.57566 0.00037204 646.27569679953 651.279503670831 76.524 0.76984 76.524 76.148 76.918 0 241 60 6 0 0 0 0.0033685 2 46160 64.841 62.44 1 0.62786 0.67385 0 25397000 16067000 9329200 6400 2148 2424 2489 9989;9990 9990 DWDELEEEAR 10 0 1 Unmodified _DWDELEEEAR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.2798 2 646.275489 1290.53642 75799.17 0.74465 0.00048125 0.11866 7.669E-05 0.86331 0.00055794 646.275428156613 651.279597782282 88.101 0.82977 88.101 87.733 88.563 0 227 50 6 0 0 0 0.0019203 2 48421 71.451 71.451 1 0.94179 0.79548 0 4826200 2665000 2161200 6401 2148 2424 2489 9991;9992 9991 DWDELEEEAR 10 0 1 Unmodified _DWDELEEEAR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.281 2 646.275489 1290.53642 76299.19 0.5105 0.00032993 0.51164 0.00033066 1.0221 0.00066059 646.275825172442 651.279756912658 88.403 0.80231 88.403 88.085 88.888 -7.6294E-06 192 46 6 0 0 0 0.016025 1 47783 48.423 48.423 1 0.93208 0.82373 0 3695000 1729900 1965100 6402 2148 2424 2489 9993 9993 DWDELEEEARK 11 1 1 Unmodified _DWDELEEEARK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.3351 2 710.32297 1418.63139 71463.74 0.49535 0.00035185 -0.25929 -0.00018418 0.23606 0.00016768 710.322369781356 719.334428231618 62.05 0.79348 62.05 61.538 62.331 0 298 64 6 0 0 0 1.3117E-05 2 35598 109.66 104.18 1 0.77625 0.92334 0 46365000 27933000 18432000 6403 2148 2425 2490 9994;9995 9995 DWDELEEEARK 11 1 1 Unmodified _DWDELEEEARK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.3349 2 710.32297 1418.63139 73605.48 0.39793 0.00028266 -0.12979 -9.219E-05 0.26814 0.00019047 710.322087561395 719.334598486357 60.678 0.84357 60.678 60.335 61.178 0 287 70 6 0 0 0 4.0205E-08 3 35496 121.6 107.49 1 0.75783 0.86419 0 20167000 11036000 9130800 6404 2148 2425 2490 9996;9997;9998 9997 DWDELEEEARK 11 1 1 Unmodified _DWDELEEEARK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.3224 2 710.32297 1418.63139 70923.3 0.49266 0.00034995 -0.46483 -0.00033018 0.027831 1.9769E-05 710.322277240459 719.835356981697 71.613 0.47772 71.613 71.346 71.824 0 145 34 7 0 0 0 0.043371 1 37738 40.994 36.543 1 1.9056 1.5814 0 3761200 1105300 2655900 6405 2148 2425 2490 9999 9999 DWEDDSDEDMSNFDR 15 0 1 Oxidation (M) _DWEDDSDEDM(ox)SNFDR_ DWEDDSDEDM(1)SNFDR DWEDDSDEDM(51.29)SNFDR 0 1 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185;B4DDC6 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.3312 2 946.331592 1890.64863 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.87 1 57.87 57.37 58.37 0 0 0 0 0.0031534 1 32754 51.286 49.847 1 6406 323 2426 2491 10000 10000 248 DWEDDSDEDMSNFDR 15 0 1 Oxidation (M) _DWEDDSDEDM(ox)SNFDR_ DWEDDSDEDM(1)SNFDR DWEDDSDEDM(53.57)SNFDR 0 1 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185;B4DDC6 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 946.3323 2 946.331592 1890.64863 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.216 1 57.216 56.716 57.716 3.8147E-06 0 0 0 0.0021768 1 33083 53.569 53.569 1 6407 323 2426 2491 10001 10001 248 DWNIPFK 7 1 0 Unmodified _DWNIPFK_ 0 0 0 Q9BYG3;C9J808;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2444 2 460.237253 918.459953 89893.79 0.43997 0.00020249 0.072361 3.3303E-05 0.51233 0.00023579 460.237156744055 464.244256938063 99.982 0.98817 99.982 99.559 100.55 -7.6294E-06 353 85 7 0 0 0 0.025781 2 61076 88.734 71.77 1 0.88881 0.96718 0 48609000 27341000 21268000 6408 2019 2427 2492 10002;10003 10002 DWNIPFK 7 1 0 Unmodified _DWNIPFK_ 0 0 0 Q9BYG3;C9J808;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.2366 2 460.237253 918.459953 89975.21 0.3403 0.00015662 0.0013369 6.1529E-07 0.34164 0.00015724 460.237129183863 464.244241110107 99.178 0.96785 99.178 98.852 99.819 -7.6294E-06 337 80 6 0 0 0 0.024609 3 61991 89.903 70.021 1 0.86895 0.96465 0 49085000 24843000 24242000 6409 2019 2427 2492 10004;10005;10006 10005 DWNIPFK 7 1 0 Unmodified _DWNIPFK_ 0 0 0 Q9BYG3;C9J808;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.2367 2 460.237253 918.459953 89987.84 0.60931 0.00028043 -0.34915 -0.00016069 0.26016 0.00011974 460.236862151109 464.244162713624 112.15 0.68753 112.15 111.81 112.5 0 175 41 6 0 0 0 0.058932 1 64987 50.966 41.725 1 1.4051 1.1232 0 8951100 3832500 5118500 6410 2019 2427 2492 10007 10007 DWNIPFK 7 1 0 Unmodified _DWNIPFK_ 0 0 0 Q9BYG3;C9J808;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 460.2363 2 460.237253 918.459953 90536.52 0.18274 8.4104E-05 0.061847 2.8464E-05 0.24459 0.00011257 460.23708950796 464.244305813491 111.97 0.69905 111.97 111.7 112.39 0 177 37 6 0 0 0 0.057865 1 63984 51.456 42.216 1 1.4189 1.1545 0 7147700 2659300 4488300 6411 2019 2427 2492 10008 10008 DWVLNEFK 8 1 0 Unmodified _DWVLNEFK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.7735 2 525.766374 1049.5182 NaN NaN NaN 0.18188 9.5626E-05 NaN NaN NaN NaN 102.95 0.82933 102.95 102.54 103.37 0 0 0 0 0.015199 2 63233 69.198 58.73 1 NaN NaN 0 13743000 0 13743000 6412 1009 2428 2493 10009;10010 10010 DWVLNEFK 8 1 0 Unmodified _DWVLNEFK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.7736 2 525.766374 1049.5182 84337.06 0.66152 0.0003478 -0.26524 -0.00013946 0.39627 0.00020835 525.766158104315 529.773342584145 102.22 0.83205 102.22 101.88 102.71 -7.6294E-06 232 64 6 0 0 0 0.0064228 1 64274 87.323 70.359 1 1.1431 1.1561 0 28874000 13004000 15870000 6413 1009 2428 2493 10011 10011 DWVLNEFR 8 0 1 Unmodified _DWVLNEFR_ 0 0 0 Q59F66;Q92841;B4DZQ7;A0A0U1RQJ0 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.7737 2 539.769448 1077.52434 85225.9 0.81087 0.00043769 -0.15149 -8.1771E-05 0.65938 0.00035591 539.769291975716 544.77338837403 104.65 0.68445 104.65 104.3 104.99 0 187 57 5 0 0 0 0.013109 1 64743 66.073 56.086 1 1.1781 1.1813 0 7936400 3242400 4694000 6414 1801 2429 2494 10012 10012 DWVLNEFR 8 0 1 Unmodified _DWVLNEFR_ 0 0 0 Q59F66;Q92841;B4DZQ7;A0A0U1RQJ0 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.7736 2 539.769448 1077.52434 85282.27 0.4928 0.000266 -0.11124 -6.0043E-05 0.38156 0.00020595 539.769399556579 544.773387840757 103.9 0.73994 103.9 103.54 104.28 7.6294E-06 191 65 4 0 0 0 0.024949 1 65709 55.531 45.544 1 1.2538 1.2456 0 7294600 2895000 4399600 6415 1801 2429 2494 10013 10013 DYAFVHFEDR 10 0 1 Unmodified _DYAFVHFEDR_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;B4DMD1 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.7993 2 649.793652 1297.57275 75483.33 0.3746 0.00024341 0.46052 0.00029924 0.83512 0.00054265 649.793590584453 654.798348204696 89.355 0.49365 89.355 89.113 89.607 -7.6294E-06 116 30 5 0 0 0 0.0024806 2 48570 68.893 63.928 1 0.65639 0.56094 0 3254300 1704600 1549700 6416 855 2430 2495 10014;10015 10014 DYAFVHMEK 9 1 0 Oxidation (M) _DYAFVHM(ox)EK_ DYAFVHM(1)EK DYAFVHM(56.43)EK 0 1 0 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.2683 2 578.260599 1154.50665 81176.73 0.81619 0.00047197 0.03645 2.1078E-05 0.85264 0.00049305 578.260314809311 582.268235419892 35.883 0.47501 35.883 35.674 36.149 0 146 45 4 0 0 0 0.0065878 1 18148 56.432 30.537 1 2.2029 2.173 0 24895000 8082700 16812000 6417 571 2431 2496 10016 10016 423 DYDEEEQGYDSEK 13 1 0 Unmodified _DYDEEEQGYDSEK_ 0 0 0 Q05519;Q6MZM2;Q6N079;Q5T757 Q05519 Q05519 SRSF11;DKFZp686D02116;DKFZp686P22142 Serine/arginine-rich splicing factor 11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.8043 2 803.805004 1605.59546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.688 1 26.688 26.188 27.188 0 0 0 0 0.0050691 1 12078 58.223 39.443 1 6418 1684 2432 2497 10017 10017 DYDEEEQGYDSEK 13 1 0 Unmodified _DYDEEEQGYDSEK_ 0 0 0 Q05519;Q6MZM2;Q6N079;Q5T757 Q05519 Q05519 SRSF11;DKFZp686D02116;DKFZp686P22142 Serine/arginine-rich splicing factor 11 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.8119 2 803.805004 1605.59546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.708 1 26.708 26.208 27.208 -1.9073E-06 0 0 0 8.5211E-11 1 12095 116.55 86.292 1 6419 1684 2432 2497 10018 10018 DYDEEEQGYDSEK 13 1 0 Unmodified _DYDEEEQGYDSEK_ 0 0 0 Q05519;Q6MZM2;Q6N079;Q5T757 Q05519 Q05519 SRSF11;DKFZp686D02116;DKFZp686P22142 Serine/arginine-rich splicing factor 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.8062 2 803.805004 1605.59546 69623.34 0.38731 0.00031132 0.44699 0.00035929 0.83429 0.00067061 803.805709458775 807.811971684411 31.705 0.25967 31.705 31.59 31.85 0 45 13 5 0 0 0 0.012922 1 13458 38.875 28.351 1 0.47007 0.39474 0 1377000 884010 492980 6420 1684 2432 2497 10019 10019 DYDWINAER 9 0 1 Unmodified _DYDWINAER_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.2646 2 591.264727 1180.5149 80135.62 0.76081 0.00044984 0.38588 0.00022815 1.1467 0.000678 591.264866225276 596.268761583755 75.872 1.0693 75.872 75.513 76.582 0 382 89 8 0 0 0 0.001489 2 44548 84.743 84.743 1 0.71839 0.79857 0 74241000 43989000 30252000 6421 69 2433 2498 10020;10021 10020 DYDWINAER 9 0 1 Unmodified _DYDWINAER_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.2651 2 591.264727 1180.5149 80125.2 0.5132 0.00030344 0.74366 0.0004397 1.2569 0.00074314 591.265041502856 596.268816367722 74.801 1.0787 74.801 74.535 75.613 0 386 96 5 0 0 0 0.0018198 2 44975 80.438 74.998 1 0.73386 0.80538 0 40298000 20236000 20063000 6422 69 2433 2498 10022;10023 10023 DYDWINAER 9 0 1 Unmodified _DYDWINAER_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.2694 2 591.264727 1180.5149 78564.17 0.47809 0.00028268 0.44129 0.00026092 0.91938 0.0005436 591.26486709426 596.269013266186 86.093 0.99854 86.093 85.636 86.634 -7.6294E-06 361 67 8 0 0 0 0.032187 1 47199 45.161 45.161 1 1.7491 1.4651 0 25071000 8996300 16075000 6423 69 2433 2498 10024 10024 DYDWINAER 9 0 1 Unmodified _DYDWINAER_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.2692 2 591.264727 1180.5149 79018.06 0.56807 0.00033588 0.10709 6.332E-05 0.67516 0.0003992 591.264708460545 596.268818336012 86.317 0.84273 86.317 85.984 86.826 0 260 49 8 0 0 0 0.0049289 2 46439 68.016 68.016 1 1.6782 1.4242 0 18862000 6657500 12204000 6424 69 2433 2498 10025;10026 10025 DYELQLVTYK 10 1 0 Unmodified _DYELQLVTYK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.3368 2 636.329536 1270.64452 80612.63 0.74113 0.0004716 -0.16688 -0.00010619 0.57425 0.00036541 636.329568828816 640.33616488185 95.53 0.577 95.53 95.248 95.825 0 135 45 5 0 0 0 0.0088105 1 58200 55.567 43.04 1 1.3818 1.3634 0 9268200 2607100 6661100 6425 1754 2434 2499 10027 10027 DYELQLVTYK 10 1 0 Unmodified _DYELQLVTYK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3366 2 636.329536 1270.64452 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.885 1 94.885 94.385 95.385 0 0 0 0 0.0054397 1 59031 63.534 45.625 1 6426 1754 2434 2499 10028 10028 DYEVELLR 8 0 1 Unmodified _DYEVELLR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.774 2 518.769114 1035.52368 84550.48 0.65032 0.00033737 0.18799 9.7525E-05 0.83832 0.00043489 518.769169566036 523.773221178302 86.869 0.7725 86.869 86.682 87.455 7.6294E-06 269 62 8 0 0 0 0.0010071 2 52342 117.16 117.16 1 0.61358 0.71435 0 186960000 115100000 71855000 6427 1244 2435 2500 10029;10030 10030 DYEVELLR 8 0 1 Unmodified _DYEVELLR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.774 2 518.769114 1035.52368 85993.32 0.52779 0.0002738 0.57723 0.00029945 1.105 0.00057325 518.769346805785 523.773337571616 85.822 1.1515 85.822 85.633 86.784 0 331 95 7 0 0 0 0.0050709 2 52829 91.626 91.626 1 0.7025 0.80149 0 142230000 84259000 57970000 6428 1244 2435 2500 10031;10032 10031 DYEVELLR 8 0 1 Unmodified _DYEVELLR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.7728 2 518.769114 1035.52368 83010.3 0.39192 0.00020332 0.27222 0.00014122 0.66414 0.00034454 518.769212249276 523.773242895854 99.035 0.82733 99.035 98.707 99.534 0 261 46 8 0 0 0 0.0022334 2 55838 101.64 101.64 1 1.271 1.093 0 47126000 20766000 26361000 6429 1244 2435 2500 10033;10034 10033 DYEVELLR 8 0 1 Unmodified _DYEVELLR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.7737 2 518.769114 1035.52368 83119.69 0.34856 0.00018082 0.32292 0.00016752 0.67149 0.00034835 518.769262248349 523.77327353953 98.914 0.87652 98.914 98.585 99.462 0 254 52 8 0 0 0 0.0087497 2 54937 77.282 77.282 1 1.235 1.0773 0 41018000 18076000 22942000 6430 1244 2435 2500 10035;10036 10035 DYEVSDSAPHLEGLAEFQENVR 22 0 1 Unmodified _DYEVSDSAPHLEGLAEFQENVR_ 0 0 0 Q9HBM1 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 836.3928 3 835.722464 2504.14556 67518.6 0.58141 0.0004859 -0.83291 -0.00069608 -0.2515 -0.00021018 836.387175809813 839.393479711305 104.1 0.84637 104.1 103.53 104.37 0 245 67 6 0 0 0 0.0002646 2 64421 35.091 33.881 1 0.71289 0.72023 0 15432000 6511400 8920400 6431 2050 2436 2501 10037;10038 10038 DYEVSDSAPHLEGLAEFQENVR 22 0 1 Unmodified _DYEVSDSAPHLEGLAEFQENVR_ 0 0 0 Q9HBM1 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.059 3 835.722464 2504.14556 68714.95 0.26831 0.00022423 0.29532 0.0002468 0.56362 0.00047103 836.056942986329 839.393392982573 103.44 0.50494 103.44 103.2 103.7 0 195 41 7 0 0 0 1.0631E-08 2 65399 71.527 68.291 1 0.78459 0.80275 0 20894000 10227000 10667000 6432 2050 2436 2501 10039;10040 10039 DYEVSDSAPHLEGLAEFQENVR 22 0 1 Unmodified _DYEVSDSAPHLEGLAEFQENVR_ 0 0 0 Q9HBM1 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 839.3934 3 835.722464 2504.14556 66621.01 0.82208 0.00068703 -0.05998 -5.0126E-05 0.7621 0.00063691 836.056454467475 839.393047857518 115.26 0.44098 115.26 115.04 115.48 0 80 19 6 0 0 0 2.3998E-08 2 67508 63.726 60.803 1 0.99978 0.86055 0 7455700 3762700 3692900 6433 2050 2436 2501 10041;10042 10042 DYEVSDSAPHLEGLAEFQENVR 22 0 1 Unmodified _DYEVSDSAPHLEGLAEFQENVR_ 0 0 0 Q9HBM1 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.918 3 835.722464 2504.14556 66974.5 0.74733 0.00062456 -0.30072 -0.00025132 0.44662 0.00037325 836.056692919004 839.39334793892 115.19 0.63113 115.19 114.96 115.6 -7.6294E-06 133 29 9 0 0 0 0.004131 1 66539 34.221 31.497 1 0.74736 0.62231 0 6245600 3630400 2615200 6434 2050 2436 2501 10043 10043 DYFEEYGK 8 1 0 Unmodified _DYFEEYGK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1058.4579 1 1050.44147 1049.43419 59895.13 0.61395 0.00064492 -0.099381 -0.00010439 0.51457 0.00054052 1050.44141073129 1058.45541244334 56.357 0.56385 56.357 56.102 56.665 0 154 49 5 0 0 0 0.0021115 1 31627 116.73 112.03 1 2.5525 2.6231 0 17495000 4577700 12917000 6435 1508 2437 2502 10044 10044 DYFEEYGK 8 1 0 Unmodified _DYFEEYGK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.7247 2 525.724372 1049.43419 82689.13 0.56201 0.00029546 0.099697 5.2413E-05 0.66171 0.00034788 525.724313414542 529.731428058181 56.361 1.0857 56.361 55.947 57.033 0 422 96 7 0 0 0 0.041092 1 31636 46.994 45.993 1 2.327 2.6239 0 112800000 33222000 79575000 6436 1508 2437 2502 10045 10045 DYFEEYGK 8 1 0 Unmodified _DYFEEYGK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1058.4691 1 1050.44147 1049.43419 59636.61 0.39181 0.00041158 0.39473 0.00041464 0.78654 0.00082622 1050.44186266564 1058.45548788457 55.457 0.67068 55.457 55.141 55.812 0 139 48 4 0 0 0 0.010059 1 31666 92.439 82.658 1 2.4684 2.5761 0 24367000 6206900 18161000 6437 1508 2437 2502 10046 10046 DYFEEYGK 8 1 0 Unmodified _DYFEEYGK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.7318 2 525.724372 1049.43419 NaN NaN NaN 0.18107 9.5193E-05 NaN NaN NaN NaN 55.454 1.0408 55.454 55.012 56.053 0 0 0 0 0.046447 1 31523 51.335 48.633 1 NaN NaN 0 54699000 0 54699000 6438 1508 2437 2502 10047 10047 DYFEEYGK 8 1 0 Unmodified _DYFEEYGK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.7242 2 525.724372 1049.43419 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.438 1 55.438 54.938 55.938 0 0 0 0 0.022142 1 31795 66.682 62 1 6439 1508 2437 2502 10048 10048 DYFEEYGK 8 1 0 Unmodified _DYFEEYGK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.7243 2 525.724372 1049.43419 83377.33 0.41729 0.00021938 0.078972 4.1518E-05 0.49627 0.0002609 525.724366815037 529.731480792304 65.18 0.86259 65.18 64.77 65.633 0 275 65 6 0 0 0 0.053707 1 33617 42.396 42.396 1 1.3384 1.0713 0 7212500 3059300 4153200 6440 1508 2437 2502 10049 10049 DYFEEYGK 8 1 0 Unmodified _DYFEEYGK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.7244 2 525.724372 1049.43419 83287.07 0.22831 0.00012003 0.17482 9.1906E-05 0.40313 0.00021193 525.724385726063 529.731480812403 65.78 0.80135 65.78 65.467 66.268 0 233 62 5 0 0 0 0.053707 1 33334 42.396 42.396 1 1.3952 1.1407 0 5552400 2552800 2999600 6441 1508 2437 2502 10050 10050 DYFEQYGK 8 1 0 Unmodified _DYFEQYGK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;F8VTQ5 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.2397 2 525.232364 1048.45018 NaN NaN NaN 0.16747 8.7962E-05 NaN NaN NaN NaN 52.538 1.1446 52.538 51.855 52.999 0 0 0 0 0.033237 1 28987 57.281 54.09 1 NaN NaN 0 57273000 0 57273000 6442 317 2438 2503 10051 10051 DYFEQYGK 8 1 0 Unmodified _DYFEQYGK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;F8VTQ5 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.2396 2 525.232364 1048.45018 82750.97 0.29411 0.00015447 0.18167 9.5421E-05 0.47578 0.0002499 525.232277278034 529.239489975984 51.524 1.0588 51.524 50.864 51.923 0 393 85 8 0 0 0 0.022274 3 28883 57.281 54.601 1 2.4177 2.703 0 104910000 31270000 73640000 6443 317 2438 2503 10052;10053;10054 10052 DYFEQYGK 8 1 0 Unmodified _DYFEQYGK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;F8VTQ5 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.2397 2 525.232364 1048.45018 84282.38 0.19712 0.00010354 0.12872 6.7607E-05 0.32584 0.00017114 525.232374518532 529.239416600797 60.365 0.81996 60.365 59.853 60.672 -3.8147E-06 274 61 6 0 0 0 0.048223 1 30788 44.395 40.823 1 1.2392 0.9828 0 6419500 2681900 3737700 6444 317 2438 2503 10055 10055 DYGEIFNVQLPDK 13 1 0 Unmodified _DYGEIFNVQLPDK_ 0 0 0 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.3831 2 769.380288 1536.74602 NaN NaN NaN -0.63149 -0.00048585 NaN NaN NaN NaN 113.32 0.34684 113.32 113.14 113.48 -7.6294E-06 0 0 0 0.02389 1 73506 45.915 32.253 1 NaN NaN 0 3207100 3207100 0 6445 278 2439 2504 10056 10056 DYGNSPLHR 9 0 1 Unmodified _DYGNSPLHR_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;A0A0D9SF20;A0A087WUW5;K7ELW5 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.7585 2 529.75433 1057.49411 NaN NaN NaN -0.27541 -0.0001459 NaN NaN NaN NaN 23.052 0.47104 23.052 22.821 23.292 1.9073E-06 0 0 0 1.4666E-07 1 8974 125.82 70.287 1 NaN NaN 0 25260000 0 25260000 6446 592 2440 2505 10057 10057 DYGNSPLHR 9 0 1 Unmodified _DYGNSPLHR_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;A0A0D9SF20;A0A087WUW5;K7ELW5 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.7544 2 529.75433 1057.49411 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.059 1 23.059 22.559 23.559 0 0 0 0 0.0021254 1 9009 87.476 53.738 1 6447 592 2440 2505 10058 10058 DYGNSPLHR 9 0 1 Unmodified _DYGNSPLHR_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;A0A0D9SF20;A0A087WUW5;K7ELW5 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.7589 2 529.75433 1057.49411 83551.56 0.38204 0.00020239 0.76379 0.00040462 1.1458 0.00060701 529.754598858809 534.758747531655 22.734 0.50865 22.734 22.485 22.994 0 100 21 6 0 0 0 0.00018162 1 8628 107.15 82.999 1 2.1788 2.3844 0 30803000 10139000 20664000 6448 592 2440 2505 10059 10059 DYGNSPLHR 9 0 1 Unmodified _DYGNSPLHR_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;A0A0D9SF20;A0A087WUW5;K7ELW5 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 534.7589 2 529.75433 1057.49411 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.204 1 25.204 24.704 25.704 0 0 0 0 0.041169 1 8625 49.418 28.863 1 6449 592 2440 2505 10060 10060 DYGVFIQFPSGLSGLAPK 18 1 0 Unmodified _DYGVFIQFPSGLSGLAPK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 948.4989 2 948.498726 1894.9829 62726.66 0.89348 0.00084747 0.5392 0.00051143 1.4327 0.0013589 949.000249082013 953.007397115784 133.11 0.49657 133.11 132.86 133.35 1.5259E-05 119 17 11 0 0 0 5.1787E-06 2 86969 95.417 95.417 1 1.1544 1.286 0 61434000 28048000 33386000 6450 1741 2441 2506 10061;10062 10062 DYGVFIQFPSGLSGLAPK 18 1 0 Unmodified _DYGVFIQFPSGLSGLAPK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.0002 2 948.498726 1894.9829 63030.56 0.87628 0.00083115 0.042662 4.0465E-05 0.91895 0.00087162 948.999982366761 953.007205502365 132.83 0.62753 132.83 132.5 133.13 0 280 33 11 0 0 0 2.3166E-12 3 88931 110.92 110.92 1 1.0934 1.2267 0 77326000 36874000 40452000 6451 1741 2441 2506 10063;10064;10065 10064 DYGVLLEGSGLALR 14 0 1 Unmodified _DYGVLLEGSGLALR_ 0 0 0 Q53HC2;P30048 Q53HC2 Q53HC2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.9035 2 731.898648 1461.78274 71643.79 0.86024 0.00062961 -0.31712 -0.0002321 0.54312 0.00039751 731.898277531294 736.902556574248 116.87 0.62787 116.87 116.62 117.25 0 188 45 7 0 0 0 4.0499E-06 2 74587 100.72 90.35 1 2.6062 2.632 0 17742000 5994600 11748000 6452 1530 2442 2507 10066;10067 10066 DYGVLLEGSGLALR 14 0 1 Unmodified _DYGVLLEGSGLALR_ 0 0 0 Q53HC2;P30048 Q53HC2 Q53HC2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.9041 2 731.898648 1461.78274 72920.1 0.80931 0.00059233 0.27387 0.00020045 1.0832 0.00079278 731.898349199241 736.902954275817 116.45 0.62823 116.45 116.13 116.75 0 159 40 6 0 0 0 3.2055E-09 3 76048 113.63 103.26 1 3.1891 3.1956 0 18337000 4339600 13997000 6453 1530 2442 2507 10068;10069;10070 10068 DYGVLLEGSGLALR 14 0 1 Unmodified _DYGVLLEGSGLALR_ 0 0 0 Q53HC2;P30048 Q53HC2 Q53HC2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.4048 2 731.898648 1461.78274 72609.98 1.1841 0.00086664 0.27123 0.00019851 1.4553 0.0010652 731.899327343245 736.90272710299 128.26 0.5127 128.26 128.06 128.58 0 84 21 6 0 0 0 0.00057697 3 77399 59.84 53.307 1 1.5006 1.2541 0 3442600 1259900 2182700 6454 1530 2442 2507 10071;10072;10073 10071 DYGVLLEGSGLALR 14 0 1 Unmodified _DYGVLLEGSGLALR_ 0 0 0 Q53HC2;P30048 Q53HC2 Q53HC2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 736.9039 2 731.898648 1461.78274 73382.15 0.8617 0.00063067 0.80873 0.00059191 1.6704 0.0012226 731.900109238767 736.902894824102 128.15 0.55394 128.15 127.84 128.4 0 81 23 6 0 0 0 5.7533E-05 2 76430 91.937 91.937 1 1.7072 1.5099 0 4043400 1443100 2600300 6455 1530 2442 2507 10074;10075 10075 DYIVVGSDSGR 11 0 1 Unmodified _DYIVVGSDSGR_ 0 0 0 A8K6V3;Q15393;J3QL37;J3QRB2 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.2894 2 584.28566 1166.55677 83772.07 0.4535 0.00026497 0.14129 8.2551E-05 0.59478 0.00034752 584.285711343789 589.290084557125 53.86 0.82806 53.86 53.408 54.236 0 159 64 4 0 0 0 0.00093586 2 30007 71.349 63.678 1 1.286 1.2969 0 15602000 6456100 9146200 6456 764 2443 2508 10076;10077 10076 DYIVVGSDSGR 11 0 1 Unmodified _DYIVVGSDSGR_ 0 0 0 A8K6V3;Q15393;J3QL37;J3QRB2 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.2908 2 584.28566 1166.55677 81198.72 0.52017 0.00030393 0.32231 0.00018832 0.84248 0.00049225 584.285744246416 589.289978573948 52.765 0.64247 52.765 52.442 53.084 0 190 50 5 0 0 0 0.0011084 2 30006 70.028 57.981 1 1.3169 1.2964 0 13260000 5282100 7977600 6457 764 2443 2508 10078;10079 10078 DYIVVGSDSGR 11 0 1 Unmodified _DYIVVGSDSGR_ 0 0 0 A8K6V3;Q15393;J3QL37;J3QRB2 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.2862 2 584.28566 1166.55677 82425.93 0.47656 0.00027845 0.74836 0.00043725 1.2249 0.0007157 584.28606898831 589.290276451629 61.393 0.5274 61.393 61.15 61.678 3.8147E-06 137 43 5 0 0 0 0.0081792 2 31401 51.268 51.268 1 0.84248 0.73757 0 1851200 922080 929120 6458 764 2443 2508 10080;10081 10081 DYLDFLDDEEDQGIYQSK 18 1 0 Unmodified _DYLDFLDDEEDQGIYQSK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1101.9896 2 1096.97895 2191.94334 60464.39 0.28353 0.00031103 0.31954 0.00035053 0.60308 0.00066156 1097.98175580558 1101.48734676784 118.67 0.51051 118.67 118.42 118.93 7.6294E-06 110 29 6 0 0 0 0.0008266 3 76225 55.314 55.314 1 1.107 1.0946 0 9421500 3082600 6338900 6459 568 2444 2509 10082;10083;10084 10084 DYLDFLDDEEDQGIYQSK 18 1 0 Unmodified _DYLDFLDDEEDQGIYQSK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1097.4811 2 1096.97895 2191.94334 59913.78 0.012406 1.3609E-05 0.67396 0.00073932 0.68636 0.00075293 1097.48209736496 1100.98625807034 118.31 0.51901 118.31 118.07 118.58 -7.6294E-06 167 31 8 0 0 0 3.9761E-05 3 77866 80.469 80.469 1 1.052 1.131 0 22800000 9987500 12813000 6460 568 2444 2509 10085;10086;10087 10086 DYLHLPPEIVPATLR 15 0 1 Unmodified _DYLHLPPEIVPATLR_ 0 0 0 P46783;F6U211;S4R435 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.4884 2 867.482879 1732.95121 66581.01 0.84178 0.00073023 0.34679 0.00030083 1.1886 0.0010311 867.483306350081 872.487138540124 117.39 0.86836 117.39 117.01 117.87 0 308 61 6 0 0 0 0.00077161 2 75041 50.354 50.354 1 1.3692 1.4176 0 20405000 10173000 10233000 6461 1573 2445 2510 10088;10089 10089 DYLHLPPEIVPATLR 15 0 1 Unmodified _DYLHLPPEIVPATLR_ 0 0 0 P46783;F6U211;S4R435 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.9944 3 578.657678 1732.95121 78986.39 0.69135 0.00040006 0.021044 1.2178E-05 0.7124 0.00041223 578.65764874456 582.328076527905 117.33 1.2002 117.33 116.92 118.12 0 602 80 10 0 0 0 3.8324E-05 2 75039 74.789 74.789 1 1.2026 1.3682 0 113680000 49248000 64431000 6462 1573 2445 2510 10090;10091 10090 DYLHLPPEIVPATLR 15 0 1 Unmodified _DYLHLPPEIVPATLR_ 0 0 0 P46783;F6U211;S4R435 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.9917 3 578.657678 1732.95121 79019.17 0.65331 0.00037805 0.019305 1.1171E-05 0.67262 0.00038922 578.991966710205 581.993795995958 116.72 1.2056 116.72 116.24 117.44 -7.6294E-06 539 74 10 0 0 0 5.9896E-05 3 76411 76.759 76.759 1 1.2466 1.4184 0 114300000 48913000 65383000 6463 1573 2445 2510 10092;10093;10094 10093 DYLHLPPEIVPATLR 15 0 1 Unmodified _DYLHLPPEIVPATLR_ 0 0 0 P46783;F6U211;S4R435 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.9856 2 867.482879 1732.95121 67019.4 0.61289 0.00053167 0.27426 0.00023792 0.88715 0.00076959 867.984716222985 872.487102215586 116.74 0.89674 116.74 116.33 117.22 0 266 55 8 0 0 0 0.022863 2 76443 37.144 37.144 1 1.2666 1.3406 0 23678000 10497000 13180000 6464 1573 2445 2510 10095;10096 10095 DYLHLPPEIVPATLR 15 0 1 Unmodified _DYLHLPPEIVPATLR_ 0 0 0 P46783;F6U211;S4R435 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.3292 3 578.657678 1732.95121 79436.66 0.94269 0.00054549 0.016459 9.524E-06 0.95914 0.00055502 578.657627295809 581.99372689476 128.67 1.0546 128.67 128.18 129.24 0 310 47 9 0 0 0 0.0032378 1 77475 27.649 27.649 1 1.0857 0.89551 0 11588000 5959500 5628600 6465 1573 2445 2510 10097 10097 DYLHLPPEIVPATLR 15 0 1 Unmodified _DYLHLPPEIVPATLR_ 0 0 0 P46783;F6U211;S4R435 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 872.9903 2 867.482879 1732.95121 65530.08 0.87306 0.00075736 0.50108 0.00043468 1.3741 0.001192 867.483894064988 872.988390703944 128.67 0.74504 128.67 128.33 129.07 0 79 33 5 0 0 0 0.059828 1 77800 22.917 22.917 1 1.8203 1.6059 0 1616800 607610 1009200 6466 1573 2445 2510 10098 10098 DYLHLPPEIVPATLR 15 0 1 Unmodified _DYLHLPPEIVPATLR_ 0 0 0 P46783;F6U211;S4R435 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.6595 3 578.657678 1732.95121 78896.16 0.71196 0.00041198 -0.065083 -3.7661E-05 0.64688 0.00037432 578.657625233798 581.993711127595 128.41 1.0181 128.41 128.01 129.03 0 277 41 8 0 0 0 0.00039717 2 76487 48.177 48.177 1 1.1209 0.90995 0 10091000 4520900 5569600 6467 1573 2445 2510 10099;10100 10100 DYLHLPPEIVPATLR 15 0 1 Unmodified _DYLHLPPEIVPATLR_ 0 0 0 P46783;F6U211;S4R435 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 872.9899 2 867.482879 1732.95121 71444.4 0.58258 0.00050538 0.70317 0.00060998 1.2857 0.0011154 867.48384706124 872.988502766525 128.46 0.74719 128.46 128.09 128.83 0 113 30 7 0 0 0 0.014359 1 76689 33.409 33.409 1 1.2533 1.1039 0 2474100 1084800 1389200 6468 1573 2445 2510 10101 10101 DYLHYIR 7 0 1 Unmodified _DYLHYIR_ 0 0 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.2533 2 490.253434 978.492316 85906.67 0.17804 8.7287E-05 0.13175 6.4593E-05 0.3098 0.00015188 490.253452129676 495.257480205102 59.287 0.62031 59.287 59.059 59.68 0 217 47 9 0 0 0 0.015104 2 33692 99.384 60.565 1 0.82853 0.97655 0 241050000 127560000 113490000 6469 1641 2446 2511 10102;10103 10103 DYLHYIR 7 0 1 Unmodified _DYLHYIR_ 0 0 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.253 2 490.253434 978.492316 85733.43 0.15375 7.5376E-05 0.075246 3.689E-05 0.229 0.00011227 490.253326513841 495.257502606849 58.092 0.64872 58.092 57.78 58.428 0 247 48 8 0 0 0 0.018449 1 33641 96.048 59.019 1 0.83759 0.96504 0 222810000 124500000 98312000 6470 1641 2446 2511 10104 10104 DYLHYIR 7 0 1 Unmodified _DYLHYIR_ 0 0 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2578 2 490.253434 978.492316 85816.92 0.12991 6.369E-05 0.22976 0.00011264 0.35967 0.00017633 490.253590207072 495.257558524976 68.841 0.90395 68.841 68.579 69.483 0 318 62 9 0 0 0 0.029479 2 35925 70.268 51.537 1 0.99401 0.85967 0 117500000 59249000 58250000 6471 1641 2446 2511 10105;10106 10106 DYLHYIR 7 0 1 Unmodified _DYLHYIR_ 0 0 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2572 2 490.253434 978.492316 86222.7 0.21961 0.00010767 0.03309 1.6223E-05 0.2527 0.00012389 490.253465948458 495.257487737955 69.319 0.95493 69.319 68.922 69.877 7.6294E-06 342 66 9 0 0 0 0.027041 2 35426 86.086 52.348 1 0.99591 0.86947 0 116010000 60092000 55922000 6472 1641 2446 2511 10107;10108 10107 DYLLMEEEFIR 11 0 1 Oxidation (M) _DYLLM(ox)EEEFIR_ DYLLM(1)EEEFIR DYLLM(70.1)EEEFIR 0 1 0 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.8558 2 737.350142 1472.68573 NaN NaN NaN -0.13866 -0.00010224 NaN NaN NaN NaN 109.09 0.55045 109.09 108.81 109.36 0 0 0 0 0.00090467 1 68105 70.1 57.893 1 NaN NaN 0 8538500 0 8538500 6473 1634 2447 2512 10109 10109 1415 DYLLMEEEFIR 11 0 1 Oxidation (M) _DYLLM(ox)EEEFIR_ DYLLM(1)EEEFIR DYLLM(85.29)EEEFIR 0 1 0 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.3541 2 737.350142 1472.68573 NaN NaN NaN -0.22897 -0.00016883 NaN NaN NaN NaN 108.6 0.47742 108.6 108.34 108.82 7.6294E-06 0 0 0 0.00036265 2 69441 85.29 69.4 1 NaN NaN 0 8523500 0 8523500 6474 1634 2447 2512 10110;10111 10110 1415 DYLLSESEDEGDNDGERK 18 1 1 Unmodified _DYLLSESEDEGDNDGERK_ 0 0 1 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1044.9513 2 1035.94035 2069.86615 60488.31 0.58121 0.0006021 -0.32292 -0.00033453 0.25829 0.00026757 1036.44136912507 1044.95107840469 48.665 0.37631 48.665 48.404 48.78 0 69 26 4 0 0 0 5.2651E-12 4 26561 110.29 110.29 1 1.4044 1.515 0 10971000 3006700 7964600 6475 2008 2448 2513 10112;10113;10114;10115 10114 DYLLSESEDEGDNDGERK 18 1 1 Unmodified _DYLLSESEDEGDNDGERK_ 0 0 1 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.9707 3 690.96266 2069.86615 NaN NaN NaN -0.29509 -0.00020389 NaN NaN NaN NaN 48.554 0.43931 48.554 48.379 48.819 3.8147E-06 0 0 0 9.4717E-05 1 26477 61.648 57.62 1 NaN NaN 0 7373900 0 7373900 6476 2008 2448 2513 10116 10116 DYLLSESEDEGDNDGERK 18 1 1 Unmodified _DYLLSESEDEGDNDGERK_ 0 0 1 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1045.4561 2 1035.94035 2069.86615 61237.35 0.71462 0.00074031 -0.10054 -0.00010415 0.61409 0.00063616 1036.4419599939 1044.95142195198 47.259 0.36419 47.259 47.136 47.5 0 62 25 4 0 0 0 3.5E-16 4 26312 116.84 115.69 1 1.6462 1.8292 0 10434000 3407900 7025700 6477 2008 2448 2513 10117;10118;10119;10120 10120 DYLLSESEDEGDNDGERK 18 1 1 Unmodified _DYLLSESEDEGDNDGERK_ 0 0 1 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.306 3 690.96266 2069.86615 73679.02 0.50383 0.00034813 0.088474 6.1132E-05 0.5923 0.00040926 691.297195340904 696.970061592582 56.088 0.63832 56.088 55.788 56.426 0 184 40 6 0 0 0 0.046728 1 28350 5.0143 5.0143 1 2.3294 1.9661 0 3160500 993060 2167500 6478 2008 2448 2513 10121 10121 DYLLSESEDEGDNDGERK 18 1 1 Unmodified _DYLLSESEDEGDNDGERK_ 0 0 1 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.9705 3 690.96266 2069.86615 74416.07 0.58667 0.00040537 -0.060138 -4.1553E-05 0.52653 0.00036382 691.297112513131 696.970131046675 56.691 0.65804 56.691 56.348 57.006 0 187 47 7 0 0 0 1.5639E-05 1 27935 52.612 52.612 1 2.327 1.9847 0 2969100 1047000 1922100 6479 2008 2448 2513 10122 10122 DYLSPVLADLAQR 13 0 1 Unmodified _DYLSPVLADLAQR_ 0 0 0 A0A024RAJ7;A0A024RAK1;Q969S9 A0A024RAJ7 A0A024RAJ7 GFM2 Ribosome-releasing factor 2, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.8957 2 730.890823 1459.76709 NaN NaN NaN -0.27529 -0.0002012 NaN NaN NaN NaN 120.43 0.30904 120.43 120.24 120.55 0 0 0 0 0.0013564 2 77668 76.143 62.373 1 NaN NaN 0 2456000 0 2456000 6480 307 2449 2514 10123;10124 10123 DYNTALSLHK 10 1 0 Unmodified _DYNTALSLHK_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.2987 2 581.29857 1160.58259 79628.82 0.20528 0.00011933 0.35234 0.00020482 0.55762 0.00032414 581.29931997174 585.305438512563 51.217 0.73626 51.217 50.76 51.496 0 143 45 5 0 0 0 0.055405 1 24612 35.541 35.541 1 1.0538 0.87371 0 1764200 897590 866610 6481 1122 2450 2515 10125 10125 DYQELMNTK 9 1 0 Oxidation (M) _DYQELM(ox)NTK_ DYQELM(1)NTK DYQELM(133.12)NTK 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.2607 2 579.260796 1156.50704 NaN NaN NaN 0.029112 1.6863E-05 NaN NaN NaN NaN 27.934 0.54474 27.934 27.625 28.17 -1.9073E-06 0 0 0 1.4419E-11 1 12966 133.12 83.273 1 NaN NaN 0 58863000 58863000 0 + 6482 1308;1309 2451 2516 10126 10126 991 DYQELMNTK 9 1 0 Oxidation (M) _DYQELM(ox)NTK_ DYQELM(1)NTK DYQELM(73.23)NTK 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.2613 2 579.260796 1156.50704 NaN NaN NaN 0.21445 0.00012422 NaN NaN NaN NaN 32.141 0.64227 32.141 31.871 32.513 0 0 0 0 0.0018631 1 13856 73.233 47.674 1 NaN NaN 0 7871200 7871200 0 + 6483 1308;1309 2451 2516 10127 10127 991 DYQELMNTK 9 1 0 Oxidation (M) _DYQELM(ox)NTK_ DYQELM(1)NTK DYQELM(46.13)NTK 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.2608 2 579.260796 1156.50704 NaN NaN NaN 0.63407 0.00036729 NaN NaN NaN NaN 62.529 0.89573 62.529 62.205 63.1 0 0 0 0 0.01644 1 32246 46.129 35.419 1 NaN NaN 0 2297800 2297800 0 + 6484 1308;1309 2451 2516 10128 10128 991 DYQELMNTK 9 1 0 Oxidation (M) _DYQELM(ox)NTK_ DYQELM(1)NTK DYQELM(58.43)NTK 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.2604 2 579.260796 1156.50704 NaN NaN NaN -0.33584 -0.00019454 NaN NaN NaN NaN 31.78 0.46007 31.78 31.543 32.003 0 0 0 0 0.0064077 1 12990 58.433 44.842 1 NaN NaN 0 2571200 2571200 0 + 6485 1308;1309 2451 2516 10129 10129 991 DYQELMNTK 9 1 0 Unmodified _DYQELMNTK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.2637 2 571.263339 1140.51212 NaN NaN NaN -0.045832 -2.6182E-05 NaN NaN NaN NaN 62.57 1.3939 62.57 62.097 63.491 0 0 0 0 0.0010681 1 32358 88.177 53.924 1 NaN NaN 0 14378000 14378000 0 + 6486 1308;1309 2451 2517 10130 10130 DYQELMNVK 9 1 0 Oxidation (M) _DYQELM(ox)NVK_ DYQELM(1)NVK DYQELM(75.21)NVK 0 1 0 CON__P35908;P35908;Q01546;CON__Q01546;H0YID6;CON__Q5XKE5;Q5XKE5 CON__P35908;CON__Q5XKE5 CON__P35908 KRT2;KRT76;KRT79 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 79 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.2712 2 578.271164 1154.52777 NaN NaN NaN -0.086464 -5E-05 NaN NaN NaN NaN 43.232 0.87998 43.232 42.876 43.756 0 0 0 0 0.001563 1 23241 75.213 42.32 1 NaN NaN 0 8035600 8035600 0 + 6487 1166;1175 2452 2518 10131 10131 886 DYQELMNVK 9 1 0 Oxidation (M) _DYQELM(ox)NVK_ DYQELM(1)NVK DYQELM(71.69)NVK 0 1 0 CON__P35908;P35908;Q01546;CON__Q01546;H0YID6;CON__Q5XKE5;Q5XKE5 CON__P35908;CON__Q5XKE5 CON__P35908 KRT2;KRT76;KRT79 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 79 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.2712 2 578.271164 1154.52777 NaN NaN NaN -0.65022 -0.000376 NaN NaN NaN NaN 42.591 0.4529 42.591 42.314 42.767 3.8147E-06 0 0 0 0.0020968 1 23054 71.692 46.555 1 NaN NaN 0 10204000 10204000 0 + 6488 1166;1175 2452 2518 10132 10132 886 DYQELMNVK 9 1 0 Oxidation (M) _DYQELM(ox)NVK_ DYQELM(1)NVK DYQELM(62.11)NVK 0 1 0 CON__P35908;P35908;Q01546;CON__Q01546;H0YID6;CON__Q5XKE5;Q5XKE5 CON__P35908;CON__Q5XKE5 CON__P35908 KRT2;KRT76;KRT79 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 79 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 578.2705 2 578.271164 1154.52777 NaN NaN NaN -0.52592 -0.00030412 NaN NaN NaN NaN 50.008 0.49909 50.008 49.655 50.154 -3.8147E-06 0 0 0 0.004948 1 24470 62.107 51.242 1 NaN NaN 0 1017600 1017600 0 + 6489 1166;1175 2452 2518 10133 10133 886 DYSAPVNFISAGLK 14 1 0 Unmodified _DYSAPVNFISAGLK_ 0 0 0 Q8N523;A0A024R1I7;Q9UBB9;B4DSX8;F6UKU9;F6SQZ1;F6XM96 Q8N523 Q8N523 TFIP11 Tuftelin-interacting protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 745.8951 2 741.385374 1480.75619 80260.6 0.87754 0.0006506 0.30658 0.00022729 1.1841 0.00087789 741.38494835397 745.894249330866 124.66 0.3328 124.66 124.53 124.86 0 47 14 5 0 0 0 0.054404 1 74767 24.276 20.389 1 1.2411 1.0499 0 1183200 516020 667160 6490 77 2453 2519 10134 10134 DYSDHPSGGSYR 12 0 1 Unmodified _DYSDHPSGGSYR_ 0 0 0 H0Y6E7;H3BT71;P38159;B4E352;Q2VIN3;Q96E39;B3KRG5;H3BUY5 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.7787 2 670.77873 1339.54291 73767.84 0.48509 0.00032539 0.063545 4.2624E-05 0.54863 0.00036801 670.778685613855 675.782929012545 17.743 0.25199 17.743 17.617 17.869 0 34 7 7 0 0 0 1.2608E-29 2 4855 172.1 102.18 1 1.3045 1.3368 0 19194000 7603100 11591000 6491 1284 2454 2520 10135;10136 10136 DYSLLPLLAAAPQVGEK 17 1 0 Unmodified _DYSLLPLLAAAPQVGEK_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.4952 2 892.993277 1783.972 65249.8 0.90219 0.00080565 -0.20523 -0.00018327 0.69696 0.00062238 892.992947607574 897.000357339557 132.32 0.51694 132.32 132.11 132.63 0 169 34 6 0 0 0 7.769E-07 2 86400 93.011 93.011 1 0.82413 0.86105 0 11880000 6821600 5058200 6492 1552 2455 2521 10137;10138 10138 DYSLLPLLAAAPQVGEK 17 1 0 Unmodified _DYSLLPLLAAAPQVGEK_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.4929 2 892.993277 1783.972 65793.47 0.78187 0.00069821 -0.45295 -0.00040448 0.32892 0.00029372 892.993176189706 897.502235140902 131.99 0.54303 131.99 131.72 132.26 0 195 37 7 0 0 0 6.4793E-07 2 88332 94.191 94.191 1 0.79853 0.80741 0 13125000 6619700 6505600 6493 1552 2455 2521 10139;10140 10140 DYTYEELLNR 10 0 1 Unmodified _DYTYEELLNR_ 0 0 0 Q6IBR8;B5BU01;P20042;Q96I16 Q6IBR8 Q6IBR8 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.3132 2 658.311874 1314.6092 76917.75 0.64732 0.00042614 0.09463 6.2296E-05 0.74195 0.00048843 658.311834657681 663.316041609393 102.98 0.37583 102.98 102.8 103.18 0 91 24 5 0 0 0 0.057893 1 58430 35.224 35.224 1 0.68668 0.57652 0 4246700 2149900 2096800 6494 1073 2456 2522 10141 10141 DYTYEELLNR 10 0 1 Unmodified _DYTYEELLNR_ 0 0 0 Q6IBR8;B5BU01;P20042;Q96I16 Q6IBR8 Q6IBR8 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.3176 2 658.311874 1314.6092 75966.45 0.43105 0.00028377 0.090145 5.9343E-05 0.52119 0.00034311 658.311666338711 663.316113960373 102.95 0.37512 102.95 102.78 103.16 0 88 23 5 0 0 0 0.0016073 2 57599 72.879 72.879 1 0.73183 0.62144 0 3104500 1548700 1555800 6495 1073 2456 2522 10142;10143 10143 DYVAPTANLDQK 12 1 0 Unmodified _DYVAPTANLDQK_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.8406 2 667.832974 1333.6514 73187.84 0.79889 0.00053353 -0.21576 -0.00014409 0.58313 0.00038943 667.832440625846 671.839901095053 55.576 0.56921 55.576 55.32 55.889 0 181 46 5 0 0 0 1.8229E-05 1 31205 104.22 99.281 1 1.4638 1.5663 0 32370000 12880000 19490000 6496 618 2457 2523 10144 10144 DYVAPTANLDQK 12 1 0 Unmodified _DYVAPTANLDQK_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8336 2 667.832974 1333.6514 74919.32 0.53147 0.00035493 0.56793 0.00037928 1.0994 0.00073421 667.833270160875 671.840328922246 54.79 0.53107 54.79 54.57 55.101 3.8147E-06 206 45 7 0 0 0 2.3371E-08 2 31314 120.09 113.79 1 1.4866 1.6765 0 62303000 25328000 36976000 6497 618 2457 2523 10145;10146 10146 DYVAPTANLDQK 12 1 0 Unmodified _DYVAPTANLDQK_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.8403 2 667.832974 1333.6514 72506.62 0.42311 0.00028257 -0.25508 -0.00017035 0.16803 0.00011222 667.832363490428 671.839947397494 64.319 0.55664 64.319 64.033 64.59 0 178 42 6 0 0 0 0.012218 1 33127 45.158 43.114 1 1.0848 0.85641 0 5323800 2691300 2632500 6498 618 2457 2523 10147 10147 DYVDLFR 7 0 1 Unmodified _DYVDLFR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.232 2 464.232168 926.449782 90282.47 0.59069 0.00027422 -0.066628 -3.0931E-05 0.52407 0.00024329 464.232037185227 469.236200614022 95.859 1.0753 95.859 95.339 96.414 7.6294E-06 310 91 5 0 0 0 0.038498 2 58136 60.358 35.36 1 0.62045 0.63512 0 35843000 19554000 16288000 6499 1665 2458 2524 10148;10149 10148 DYYQTLGLAR 10 0 1 Unmodified _DYYQTLGLAR_ 0 0 0 Q6FI51;Q6FHS4;P25685;B4DKK9 Q6FI51 Q6FI51 DNAJB1 DnaJ homolog subfamily B member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.3113 2 600.306395 1198.59824 80911.37 0.6259 0.00037573 1.3737 0.00082463 1.9996 0.0012004 600.810361679448 605.31033769943 83.212 0.48497 83.212 82.95 83.435 0 165 42 7 0 0 0 0.041181 1 49721 38.303 38.303 1 0.47794 0.47997 0 9200700 5058600 4142200 6500 1517 2459 2525 10150 10150 EAAAAAAAAHQQALR 15 0 1 Unmodified _EAAAAAAAAHQQALR_ 0 0 0 A0A1C7CYX1 A0A1C7CYX1 A0A1C7CYX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.3826 2 725.381488 1448.74842 73003.44 0.41206 0.0002989 0.89794 0.00065135 1.31 0.00095025 725.38151507374 730.386817790974 24.638 0.1418 24.638 24.566 24.708 1.9073E-06 11 5 4 0 0 0 0.0002215 1 10395 66.056 55.532 1 1.21 1.2791 0 3964600 2273300 1691400 6501 638 2460 2526 10151 10151 EAAAAAAAAHQQALR 15 0 1 Unmodified _EAAAAAAAAHQQALR_ 0 0 0 A0A1C7CYX1 A0A1C7CYX1 A0A1C7CYX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.3824 2 725.381488 1448.74842 75376.15 0.44231 0.00032085 -0.026017 -1.8872E-05 0.4163 0.00030197 725.381877102506 730.385645602536 24.398 0.25504 24.398 24.278 24.533 0 26 11 4 0 0 0 0.000589 1 10197 54.259 54.259 1 0.65898 0.6647 0 6111900 2829400 3282600 6502 638 2460 2526 10152 10152 EAAENSLVAYK 11 1 0 Unmodified _EAAENSLVAYK_ 0 0 0 V9HW98;P62258;G9K389;G9K388;B7ZA86;K7EM20 V9HW98 V9HW98 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.8121 2 597.803685 1193.59282 80830.78 0.44506 0.00026606 0.35631 0.00021301 0.80137 0.00047906 597.803957521142 601.81110167721 46.031 0.48318 46.031 45.801 46.284 0 121 39 4 0 0 0 1.3191E-05 2 25309 107.57 92.424 1 1.6083 1.6817 0 19324000 7496700 11827000 6503 1637 2461 2527 10153;10154 10153 EAAENSLVAYK 11 1 0 Unmodified _EAAENSLVAYK_ 0 0 0 V9HW98;P62258;G9K389;G9K388;B7ZA86;K7EM20 V9HW98 V9HW98 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.8109 2 597.803685 1193.59282 80979.02 0.60132 0.00035947 -0.10297 -6.1556E-05 0.49835 0.00029791 597.803795367326 601.810672224388 54.386 0.63956 54.386 54.036 54.675 0 133 48 4 0 0 0 0.0050483 1 27092 56.916 52.225 1 1.6432 1.3756 0 2206500 894130 1312400 6504 1637 2461 2527 10155 10155 EAAFDDAVEER 11 0 1 Unmodified _EAAFDDAVEER_ 0 0 0 Q09028;E9PNS2;E9PIC4;E9PNS6 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.2783 2 626.278032 1250.54151 76547.2 0.77975 0.00048834 0.015968 1E-05 0.79572 0.00049834 626.277964343373 631.282166463014 47.428 1.0888 47.428 47.009 48.098 0 501 97 8 0 0 0 0.00046689 2 25525 76.228 76.228 1 0.76 0.89862 0 266400000 150980000 115420000 6505 1695 2462 2528 10156;10157 10156 EAAFDDAVEER 11 0 1 Unmodified _EAAFDDAVEER_ 0 0 0 Q09028;E9PNS2;E9PIC4;E9PNS6 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.2782 2 626.278032 1250.54151 77047.92 0.76032 0.00047617 0.023385 1.4645E-05 0.7837 0.00049082 626.278007307622 631.282117871896 46.388 0.82036 46.388 46.033 46.853 0 396 65 9 0 0 0 2.7331E-05 2 25483 102.06 102.06 1 0.80205 0.9318 0 361770000 206370000 155400000 6506 1695 2462 2528 10158;10159 10159 EAAFDDAVEER 11 0 1 Unmodified _EAAFDDAVEER_ 0 0 0 Q09028;E9PNS2;E9PIC4;E9PNS6 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.2778 2 626.278032 1250.54151 76402.27 0.60592 0.00037948 -0.14388 -9.0112E-05 0.46204 0.00028937 626.277955268209 631.282035746961 54.615 1.3904 54.615 54.187 55.577 0 469 93 10 0 0 0 0.00047605 3 27148 75.509 75.509 1 1.7038 1.4555 0 38400000 13537000 24863000 6507 1695 2462 2528 10160;10161;10162 10161 EAAFDDAVEER 11 0 1 Unmodified _EAAFDDAVEER_ 0 0 0 Q09028;E9PNS2;E9PIC4;E9PNS6 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.2776 2 626.278032 1250.54151 76856.3 0.48747 0.00030529 -0.24707 -0.00015474 0.2404 0.00015056 626.277921539275 631.281975822256 55.162 1.3346 55.162 54.669 56.004 0 448 87 10 0 0 0 0.0014091 3 26898 67.726 67.726 1 1.6872 1.4717 0 36550000 12771000 23779000 6508 1695 2462 2528 10163;10164;10165 10164 EAAGTTAAAGTGGATEQPPR 20 0 1 Unmodified _EAAGTTAAAGTGGATEQPPR_ 0 0 0 O43290;E9PQI8;B4DP43 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.4416 2 907.437386 1812.86022 62971.82 0.29946 0.00027174 -0.15448 -0.00014018 0.14498 0.00013156 907.436885939945 912.442045723387 26.654 0.18375 26.654 26.539 26.723 -1.9073E-06 43 10 6 0 0 0 1.0443E-12 2 12004 102.73 94.423 1 0.94162 0.9671 0 10125000 5483000 4642400 6509 1384 2463 2529 10166;10167 10167 EAAGTTAAAGTGGATEQPPR 20 0 1 Unmodified _EAAGTTAAAGTGGATEQPPR_ 0 0 0 O43290;E9PQI8;B4DP43 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 907.4371 2 907.437386 1812.86022 65857.39 0.32956 0.00029905 0.68925 0.00062545 1.0188 0.00092451 907.437303891857 912.44213748887 26.256 0.26877 26.256 26.105 26.374 0 50 13 6 0 0 0 8.968E-14 2 11704 111.83 101.78 1 0.808 0.79934 0 12426000 6496800 5929200 6510 1384 2463 2529 10168;10169 10168 EAALAEVADEK 11 1 0 Unmodified _EAALAEVADEK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.2881 2 573.287868 1144.56118 79245.41 0.60682 0.00034788 0.28555 0.0001637 0.89238 0.00051159 573.287933895656 577.294989872795 47.694 1.2975 47.694 47.26 48.558 0 381 111 7 0 0 0 1.0592E-08 2 25929 123.75 110.71 1 0.784 0.92751 0 420080000 239170000 180910000 6511 740 2464 2530 10170;10171 10171 EAALAEVADEK 11 1 0 Unmodified _EAALAEVADEK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.2952 2 573.287868 1144.56118 78663.74 0.80676 0.0004625 0.35799 0.00020523 1.1647 0.00066774 573.288022402421 577.294990641512 46.605 0.84864 46.605 46.344 47.193 0 377 72 8 0 0 0 1.548E-10 2 25708 135.55 119.67 1 0.85214 1.0044 0 635990000 338940000 297050000 6512 740 2464 2530 10172;10173 10172 EAALAEVADEK 11 1 0 Unmodified _EAALAEVADEK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.2947 2 573.287868 1144.56118 NaN NaN NaN -0.59988 -0.0003439 NaN NaN NaN NaN 54.896 1.2487 54.896 54.481 55.729 0 0 0 0 0.002174 1 27264 77.14 59.754 1 NaN NaN 0 33505000 0 33505000 6513 740 2464 2530 10174 10174 EAALAEVADEK 11 1 0 Unmodified _EAALAEVADEK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.2949 2 573.287868 1144.56118 NaN NaN NaN -0.84114 -0.00048222 NaN NaN NaN NaN 55.313 1.297 55.313 54.937 56.234 3.8147E-06 0 0 0 0.049468 1 26915 44.425 25.643 1 NaN NaN 0 24588000 0 24588000 6514 740 2464 2530 10175 10175 EAALGAGFSDK 11 1 0 Unmodified _EAALGAGFSDK_ 0 0 0 P55084;B4DY96;B5MD38;F5GZQ3;D6W539;B4DDC9;C9JEY0;C9JE81;Q92799 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.272 2 533.264196 1064.51384 82432.67 0.47043 0.00025086 0.144 7.679E-05 0.61443 0.00032765 533.264196843394 537.271430746969 45.029 0.65258 45.029 44.703 45.356 -3.8147E-06 192 53 5 0 0 0 0.013026 1 24562 47.559 37.53 1 1.1508 1.1849 0 32462000 17324000 15138000 6515 1615 2465 2531 10176 10176 EAALSQEQIQILAK 14 1 0 Unmodified _EAALSQEQIQILAK_ 0 0 0 A8K4Q6;O14867 A8K4Q6 A8K4Q6 BACH1 Transcription regulator protein BACH1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.437 2 771.430313 1540.84607 NaN NaN NaN 0.24275 0.00018727 NaN NaN NaN NaN 88.894 0.31028 88.894 88.68 88.99 7.6294E-06 0 0 0 1.4241E-09 1 53545 108.47 92.092 1 NaN NaN 0 7616300 0 7616300 6516 739 2466 2532 10177 10177 EAALSQEQIQILAK 14 1 0 Unmodified _EAALSQEQIQILAK_ 0 0 0 A8K4Q6;O14867 A8K4Q6 A8K4Q6 BACH1 Transcription regulator protein BACH1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.4379 2 771.430313 1540.84607 NaN NaN NaN -0.2117 -0.00016331 NaN NaN NaN NaN 101.89 0.44035 101.89 101.62 102.06 0 0 0 0 0.0013811 1 57754 71.555 57.892 1 NaN NaN 0 2466900 0 2466900 6517 739 2466 2532 10178 10178 EAALSQEQIQILAK 14 1 0 Unmodified _EAALSQEQIQILAK_ 0 0 0 A8K4Q6;O14867 A8K4Q6 A8K4Q6 BACH1 Transcription regulator protein BACH1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.9406 2 771.430313 1540.84607 74203.53 0.63522 0.00049003 -0.4116 -0.00031752 0.22362 0.00017251 771.429826336273 775.436995213268 101.78 0.4144 101.78 101.51 101.93 0 72 31 4 0 0 0 0.0037659 1 56784 46.592 46.592 1 2.4001 1.8776 0 3382700 979100 2403600 6518 739 2466 2532 10179 10179 EAALSTALSEK 11 1 0 Unmodified _EAALSTALSEK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.2991 2 560.298236 1118.58192 81202.27 0.66551 0.00037288 -0.096479 -5.4057E-05 0.56903 0.00031883 560.298071968554 564.305203706729 51.273 1.1661 51.273 50.794 51.96 0 540 104 10 0 0 0 0.00032579 2 28116 87.298 87.298 1 1.246 1.4648 0 313450000 143710000 169740000 6519 1440 2467 2533 10180;10181 10181 EAALSTALSEK 11 1 0 Unmodified _EAALSTALSEK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.2985 2 560.298236 1118.58192 81090.98 0.76665 0.00042955 -0.080555 -4.5135E-05 0.68609 0.00038442 560.298089348558 564.305244602825 50.084 0.99137 50.084 49.572 50.563 0 504 87 10 0 0 0 0.00039295 3 28020 82.029 82.029 1 1.3476 1.5818 0 340970000 159870000 181100000 6520 1440 2467 2533 10182;10183;10184 10183 EAALSTALSEK 11 1 0 Unmodified _EAALSTALSEK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1119.5945 1 1119.58919 1118.58192 60164.55 0.69626 0.00077952 1.0938 0.0012246 1.79 0.0020041 1119.5903163841 1127.60446935705 49.922 0.11186 49.922 49.827 49.939 0 19 9 4 0 0 0 0.036196 1 28142 45.368 28.592 1 2.0679 2.0866 0 7969300 2988300 4981000 6521 1440 2467 2533 10185 10185 EAALSTALSEK 11 1 0 Unmodified _EAALSTALSEK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.3057 2 560.298236 1118.58192 81000.91 0.46022 0.00025786 -0.065873 -3.6909E-05 0.39435 0.00022095 560.298117693423 564.305285100556 58.958 1.0593 58.958 58.517 59.576 0 430 81 9 0 0 0 0.001099 1 29907 70.1 70.1 1 1.4119 1.1327 0 21226000 8925300 12300000 6522 1440 2467 2533 10186 10186 EAALSTALSEK 11 1 0 Unmodified _EAALSTALSEK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.3063 2 560.298236 1118.58192 80902.85 0.49442 0.00027702 -0.11763 -6.5909E-05 0.37679 0.00021111 560.29813040167 564.305396582868 59.459 1.138 59.459 59.059 60.197 0 431 87 7 0 0 0 0.0036568 1 29550 59.426 50.212 1 1.4233 1.1432 0 15412000 6154000 9257900 6523 1440 2467 2533 10187 10187 EAALTSEEVGADLEQVEVLQK 21 1 0 Unmodified _EAALTSEEVGADLEQVEVLQK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1133.5825 2 1129.57354 2257.13254 58708.35 0.34593 0.00039075 0.21915 0.00024755 0.56508 0.00063829 1130.07627073074 1134.08204540469 111.94 0.38226 111.94 111.75 112.13 0 100 27 5 0 0 0 4.7076E-09 1 70488 85.457 85.457 1 1.7387 1.812 0 11678000 4713300 6964200 6524 523 2468 2534 10188 10188 EAALTSEEVGADLEQVEVLQK 21 1 0 Unmodified _EAALTSEEVGADLEQVEVLQK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1133.5775 2 1129.57354 2257.13254 58626.88 0.30246 0.00034166 0.39452 0.00044564 0.69698 0.00078729 1130.57803404025 1134.08211748083 111.49 0.34153 111.49 111.26 111.6 0 86 21 6 0 0 0 0.00072543 1 71853 35.657 35.657 1 1.3526 1.4148 0 10347000 5563700 4783800 6525 523 2468 2534 10189 10189 EAALTSEEVGADLEQVEVLQK 21 1 0 Unmodified _EAALTSEEVGADLEQVEVLQK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1133.5807 2 1129.57354 2257.13254 57247.78 0.3699 0.00041783 -0.17117 -0.00019335 0.19873 0.00022448 1130.07489636297 1134.0817584284 123.19 0.28728 123.19 123.05 123.33 7.6294E-06 52 13 7 0 0 0 0.0027034 1 72662 31.614 31.614 1 7.5153 6.1313 0 6065700 762330 5303400 6526 523 2468 2534 10190 10190 EAALVQQEEEK 11 1 0 Unmodified _EAALVQQEEEK_ 0 0 0 Q15020;B4DYA2;B4DRG9;F8VV04;B4E3R6 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.3239 2 637.317157 1272.61976 NaN NaN NaN -0.010362 -6.6037E-06 NaN NaN NaN NaN 27.96 0.34747 27.96 27.796 28.144 0 0 0 0 2.7897E-12 1 13124 128.36 90.058 1 NaN NaN 0 7229700 0 7229700 6527 1748 2469 2535 10191 10191 EAALVQQEEEK 11 1 0 Unmodified _EAALVQQEEEK_ 0 0 0 Q15020;B4DYA2;B4DRG9;F8VV04;B4E3R6 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3235 2 637.317157 1272.61976 NaN NaN NaN -0.44591 -0.00028419 NaN NaN NaN NaN 27.514 0.26908 27.514 27.38 27.649 0 0 0 0 0.000894 1 12838 87.258 65.265 1 NaN NaN 0 8515100 0 8515100 6528 1748 2469 2535 10192 10192 EAASLLEAGEERPGEQSQGTQSQGSALQDPECFAHLLR 38 0 2 Unmodified _EAASLLEAGEERPGEQSQGTQSQGSALQDPECFAHLLR_ 0 0 1 A0A024R570;A0A024R5E3;A0A024R5D2;O00255;Q9UE24 A0A024R570 A0A024R570 MEN1 Menin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1025.2368 4 1024.98708 4095.91921 59879.47 0.3429 0.00035147 -0.24386 -0.00024996 0.099033 0.00010151 1025.48781709995 1030.49272121019 117.36 0.37178 117.36 117.18 117.55 7.6294E-06 142 17 13 0 0 0 0.014654 3 69098 14.296 14.296 1 1.3844 1.1725 0 8985400 4037700 4947700 6529 171 2470 2536 10193;10194;10195 10194 EAASLLEAGEERPGEQSQGTQSQGSALQDPECFAHLLR 38 0 2 Unmodified _EAASLLEAGEERPGEQSQGTQSQGSALQDPECFAHLLR_ 0 0 1 A0A024R570;A0A024R5E3;A0A024R5D2;O00255;Q9UE24 A0A024R570 A0A024R570 MEN1 Menin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1030.2421 4 1024.98708 4095.91921 60158.85 0.3499 0.00035864 -0.39203 -0.00040182 -0.042129 -4.3182E-05 1025.48746529612 1030.49256037512 117.14 0.3774 117.14 116.97 117.35 0 137 17 13 0 0 0 0.00014538 3 68008 25.709 25.709 1 1.3788 1.2541 0 6697000 2677200 4019900 6530 171 2470 2536 10196;10197;10198 10196 EAATQAQQTLGSTIDK 16 1 0 Unmodified _EAATQAQQTLGSTIDK_ 0 0 0 Q53HS0;P47897;A8K3A8;B4DNN3;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;C9J165;F2Z2V6;I3QNU8 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.4277 2 831.420673 1660.82679 NaN NaN NaN -0.14275 -0.00011869 NaN NaN NaN NaN 53.188 0.34355 53.188 52.999 53.343 -3.8147E-06 0 0 0 3.8275E-106 1 29670 216.68 200.05 1 NaN NaN 0 11911000 0 11911000 6531 1575 2471 2537 10199 10199 EAATQAQQTLGSTIDK 16 1 0 Unmodified _EAATQAQQTLGSTIDK_ 0 0 0 Q53HS0;P47897;A8K3A8;B4DNN3;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;C9J165;F2Z2V6;I3QNU8 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.4272 2 831.420673 1660.82679 65906.68 0.84839 0.00070537 -0.44625 -0.00037102 0.40214 0.00033434 832.422035889936 835.427762905467 52.165 0.45196 52.165 51.923 52.375 0 160 33 6 0 0 0 1.2003E-33 2 29567 153.75 145.02 1 1.7222 1.8049 0 24116000 8975300 15141000 6532 1575 2471 2537 10200;10201 10200 EAATQAQQTLGSTIDK 16 1 0 Unmodified _EAATQAQQTLGSTIDK_ 0 0 0 Q53HS0;P47897;A8K3A8;B4DNN3;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;C9J165;F2Z2V6;I3QNU8 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.4214 2 831.420673 1660.82679 67738.21 0.45517 0.00037844 -0.11485 -9.5487E-05 0.34032 0.00028295 831.420935376991 835.427862778771 62.345 0.64127 62.345 61.936 62.577 3.8147E-06 220 51 7 0 0 0 0.0015606 1 32005 50.088 50.088 1 0.86505 0.68583 0 4286100 2210800 2075300 6533 1575 2471 2537 10202 10202 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR 37 0 2 Unmodified _EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1030.2448 4 1029.74364 4114.94547 58880.89 0.65048 0.00066983 -0.21355 -0.0002199 0.43693 0.00044993 1030.49715389461 1034.99716153235 103.25 0.74153 103.25 102.84 103.58 0 538 62 11 0 0 0 0.017766 2 63533 12.147 12.147 1 1.1185 1.2173 0 66396000 34872000 31524000 6534 2008 2472 2538 10203;10204 10203 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR 37 0 2 Unmodified _EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1030.2448 4 1029.74364 4114.94547 58937.89 0.73651 0.00075842 -0.060682 -6.2487E-05 0.67583 0.00069593 1030.24468651853 1034.99830119292 102.33 0.72435 102.33 102.02 102.74 -7.6294E-06 464 56 11 0 0 0 0.00018259 2 64403 24.297 24.297 1 1.0548 1.2238 0 81009000 42291000 38718000 6535 2008 2472 2538 10205;10206 10205 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR 37 0 2 Unmodified _EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1030.2448 4 1029.74364 4114.94547 58952.5 0.75303 0.00077543 -0.66182 -0.0006815 0.091212 9.3925E-05 1030.24444526204 1034.99773216112 114.27 0.547 114.27 114.02 114.57 0 252 23 18 0 0 0 3.179E-40 4 66732 94.614 91.207 1 1.485 1.1816 0 99383000 39988000 59395000 6536 2008 2472 2538 10207;10208;10209;10210 10209 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR 37 0 2 Unmodified _EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1030.2456 4 1029.74364 4114.94547 58949.66 0.46245 0.00047621 -0.02946 -3.0336E-05 0.43299 0.00044587 1030.24487121722 1034.99815117704 114.14 0.71632 114.14 113.91 114.62 7.6294E-06 282 29 16 0 0 0 8.7726E-47 1 65751 102.53 100.29 1 1.6155 1.5207 0 62253000 23064000 39189000 6537 2008 2472 2538 10211 10211 EAAWAITNATSGGSAEQIK 19 1 0 Unmodified _EAAWAITNATSGGSAEQIK_ 0 0 0 Q5BKZ2;P52294;B3KXZ2;B3KWR2 Q5BKZ2 Q5BKZ2 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.9771 2 952.971061 1903.92757 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.327 1 79.327 78.827 79.827 0 0 0 0 0.0050271 1 47031 48.704 40.399 1 6538 1600 2473 2539 10212 10212 EAAWAITNATSGGTPEQIR 19 0 1 Unmodified _EAAWAITNATSGGTPEQIR_ 0 0 0 B4DII5;B4DWX3;O60684;O15131 B4DII5 B4DII5 KPNA6;KPNA5 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 986.9928 2 986.989785 1971.96502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85 1 85 84.5 85.5 0 0 0 0 0.00079119 1 51007 56.482 43.921 1 6539 980 2474 2540 10213 10213 EAAWAITNATSGGTPEQIR 19 0 1 Unmodified _EAAWAITNATSGGTPEQIR_ 0 0 0 B4DII5;B4DWX3;O60684;O15131 B4DII5 B4DII5 KPNA6;KPNA5 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 991.9941 2 986.989785 1971.96502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.061 1 85.061 84.561 85.561 7.6294E-06 0 0 0 9.7405E-05 1 51052 66.533 51.331 1 6540 980 2474 2540 10214 10214 EAAWAITNATSGGTPEQIR 19 0 1 Unmodified _EAAWAITNATSGGTPEQIR_ 0 0 0 B4DII5;B4DWX3;O60684;O15131 B4DII5 B4DII5 KPNA6;KPNA5 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 991.9944 2 986.989785 1971.96502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.377 1 84.377 83.877 84.877 0 0 0 0 2.3758E-06 1 51807 81.619 69.058 1 6541 980 2474 2540 10215 10215 EACGVIVELIK 11 1 0 Unmodified _EACGVIVELIK_ 0 0 0 B5BUB1;Q9Y265 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.8425 2 615.841756 1229.66896 79148.98 0.20942 0.00012897 -0.54794 -0.00033744 -0.33852 -0.00020847 615.841481774098 619.848222948512 103.76 0.74252 103.76 103.45 104.19 0 293 64 7 0 0 0 0.0012067 2 65563 69.275 51.051 1 0.7487 0.75578 0 28390000 15892000 12498000 6542 1076 2475 2541 10216;10217 10216 EACGVIVELIK 11 1 0 Unmodified _EACGVIVELIK_ 0 0 0 B5BUB1;Q9Y265 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.8413 2 615.841756 1229.66896 76246.39 0.26024 0.00016027 -0.14926 -9.1918E-05 0.11098 6.8348E-05 615.841685866008 619.848754348587 116.42 0.64543 116.42 116.25 116.9 0 108 25 6 0 0 0 0.0010647 1 68403 70.363 54.748 1 1.1571 0.90384 0 11939000 5222800 6716500 6543 1076 2475 2541 10218 10218 EACGVIVELIK 11 1 0 Unmodified _EACGVIVELIK_ 0 0 0 B5BUB1;Q9Y265 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.8419 2 615.841756 1229.66896 76677.71 0.77152 0.00047513 -0.33719 -0.00020765 0.43433 0.00026748 615.841575575463 619.84855759631 116.24 0.65939 116.24 116.04 116.7 7.6294E-06 118 30 6 0 0 0 0.00071156 1 67312 73.067 51.619 1 1.1841 0.97871 0 11783000 4891600 6891200 6544 1076 2475 2541 10219 10219 EADGILKPLPK 11 2 0 Unmodified _EADGILKPLPK_ 0 0 1 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.8646 2 590.850438 1179.68632 NaN NaN NaN 0.395 0.00023339 NaN NaN NaN NaN 54.365 0.2767 54.365 54.169 54.446 -3.8147E-06 0 0 0 0.00065726 1 30514 99.136 75.367 1 NaN NaN 0 5290200 0 5290200 6545 1583 2476 2542 10220 10220 EADGSETPEPFAAEAK 16 1 0 Unmodified _EADGSETPEPFAAEAK_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.8777 2 824.870482 1647.72641 67254.98 0.64986 0.00053605 -0.22731 -0.0001875 0.42255 0.00034855 824.870691922687 828.877597966413 56.693 0.75191 56.693 56.423 57.175 0 382 65 8 0 0 0 1.9809E-44 2 31842 164.48 161.53 1 1.5553 1.664 0 32359000 12757000 19602000 6546 618 2477 2543 10221;10222 10222 EADGSETPEPFAAEAK 16 1 0 Unmodified _EADGSETPEPFAAEAK_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.8777 2 824.870482 1647.72641 67146.35 0.60595 0.00049983 -0.19716 -0.00016263 0.40879 0.0003372 824.870641416099 828.877598813629 55.978 0.76888 55.978 55.563 56.332 0 337 61 8 0 0 0 0.00080206 2 31919 47.915 47.915 1 1.7293 1.8609 0 37717000 14966000 22752000 6547 618 2477 2543 10223;10224 10223 EADLDVATITK 11 1 0 Unmodified _EADLDVATITK_ 0 0 0 P57740;B3KMK0 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.311 2 588.311343 1174.60813 NaN NaN NaN -0.75134 -0.00044202 NaN NaN NaN NaN 70.636 0.4308 70.636 70.414 70.845 7.6294E-06 0 0 0 0.005851 1 41053 64.374 52.307 1 NaN NaN 0 9282200 9282200 0 6548 1621 2478 2544 10225 10225 EADLDVATITK 11 1 0 Unmodified _EADLDVATITK_ 0 0 0 P57740;B3KMK0 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.3121 2 588.311343 1174.60813 NaN NaN NaN -0.24596 -0.0001447 NaN NaN NaN NaN 69.449 0.39752 69.449 69.261 69.658 0 0 0 0 0.032809 1 41350 49.35 33.148 1 NaN NaN 0 11508000 11508000 0 6549 1621 2478 2544 10226 10226 EADQTHAQNFSSAVK 15 1 0 Unmodified _EADQTHAQNFSSAVK_ 0 0 0 H0Y4R5;Q5SNT2 H0Y4R5 H0Y4R5 TMEM201 Transmembrane protein 201 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.5973 3 544.925264 1631.75396 82558.13 0.68917 0.00037554 -0.55703 -0.00030354 0.13214 7.2005E-05 544.924753533526 547.596563519935 25.949 0.22409 25.949 25.807 26.031 0 38 10 5 0 0 0 0.0014971 1 11462 29.341 26.681 1 1.0182 1.0596 0 11562000 5984800 5577500 6550 1283 2479 2545 10227 10227 EADQTHAQNFSSAVK 15 1 0 Unmodified _EADQTHAQNFSSAVK_ 0 0 0 H0Y4R5;Q5SNT2 H0Y4R5 H0Y4R5 TMEM201 Transmembrane protein 201 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.5964 3 544.925264 1631.75396 81850.97 0.86584 0.00047182 -0.13031 -7.101E-05 0.73553 0.00040081 544.925528618757 547.596508988672 25.547 0.23063 25.547 25.417 25.647 1.9073E-06 30 9 6 0 0 0 0.012766 1 11204 26.292 21.57 1 1.2626 1.2869 0 12209000 5389700 6819500 6551 1283 2479 2545 10228 10228 EADQTHAQNFSSAVK 15 1 0 Unmodified _EADQTHAQNFSSAVK_ 0 0 0 H0Y4R5;Q5SNT2 H0Y4R5 H0Y4R5 TMEM201 Transmembrane protein 201 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.8934 2 816.884258 1631.75396 NaN NaN NaN 0.62608 0.00051144 NaN NaN NaN NaN 25.603 0.157 25.603 25.49 25.647 1.9073E-06 0 0 0 1.3285E-15 1 11187 119.69 75.38 1 NaN NaN 0 2484300 0 2484300 6552 1283 2479 2545 10229 10229 EAEAAEAEEPWGEEAR 16 0 1 Unmodified _EAEAAEAEEPWGEEAR_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24 A0A024R570 A0A024R570 MEN1 Menin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 892.3885 2 887.381745 1772.74894 64582.62 0.49703 0.00044106 1.7963 0.001594 2.2933 0.0020351 887.382044348173 892.386276933348 67.173 0.72823 67.173 66.746 67.474 0 245 51 9 0 0 0 0.00045028 1 34918 49.423 41.118 1 1.139 0.97145 0 2800100 1045100 1755000 6553 171 2480 2546 10230 10230 EAEAAEAEEPWGEEAR 16 0 1 Unmodified _EAEAAEAEEPWGEEAR_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24 A0A024R570 A0A024R570 MEN1 Menin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 892.8875 2 887.381745 1772.74894 65878.23 0.1321 0.00011722 0.365 0.00032389 0.49709 0.00044111 887.382136884371 892.38622936345 67.848 0.58288 67.848 67.554 68.137 0 216 42 7 0 0 0 0.00015478 2 34546 71.085 65.591 1 1.3481 1.1916 0 3787900 1658700 2129300 6554 171 2480 2546 10231;10232 10232 EAEAAIYHLQLFEELR 16 0 1 Unmodified _EAEAAIYHLQLFEELR_ 0 0 0 V9HWB8;P14618;B4DNK4;Q8WUW7;Q9UKK4;Q9UN47;Q9NYI7 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.337 3 644.666902 1930.97888 78040.08 0.8021 0.00051709 -0.037882 -2.4421E-05 0.76422 0.00049267 645.00097067863 648.003127440997 114.74 0.46822 114.74 114.52 114.99 0 78 31 4 0 0 0 4.3131E-05 1 72797 76.151 76.151 1 1.9629 1.9601 0 8056000 2422400 5633600 6555 1481 2481 2547 10233 10233 EAEAAIYHLQLFEELR 16 0 1 Unmodified _EAEAAIYHLQLFEELR_ 0 0 0 V9HWB8;P14618;B4DNK4;Q8WUW7;Q9UKK4;Q9UN47;Q9NYI7 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.3378 3 644.666902 1930.97888 77618.41 0.73576 0.00047432 -0.3387 -0.00021835 0.39706 0.00025597 645.000479672358 648.003137888394 113.98 0.55798 113.98 113.74 114.3 0 127 41 6 0 0 0 4.7057E-05 1 73994 66.809 66.809 1 2.0055 2.0073 0 6865600 1885400 4980200 6556 1481 2481 2547 10234 10234 EAEEVMDAGCQESAGPER 18 0 1 Oxidation (M) _EAEEVM(ox)DAGCQESAGPER_ EAEEVM(1)DAGCQESAGPER EAEEVM(98.94)DAGCQESAGPER 0 1 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 990.8969 2 990.899119 1979.78368 NaN NaN NaN -0.049457 -4.9007E-05 NaN NaN NaN NaN 26.049 0.20039 26.049 25.96 26.16 0 0 0 0 3.2294E-13 1 11570 98.942 94.141 1 NaN NaN 0 4901400 4901400 0 6557 1965 2482 2548 10235 10235 1810 EAEEVMDAGCQESAGPER 18 0 1 Oxidation (M) _EAEEVM(ox)DAGCQESAGPER_ EAEEVM(1)DAGCQESAGPER EAEEVM(100.22)DAGCQESAGPER 0 1 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 991.3991 2 990.899119 1979.78368 NaN NaN NaN -0.59791 -0.00059247 NaN NaN NaN NaN 26.353 0.2617 26.353 26.191 26.452 0 0 0 0 2.616E-13 1 11755 100.22 94.499 1 NaN NaN 0 4326000 4326000 0 6558 1965 2482 2548 10236 10236 1810 EAEEVMDAGCQESAGPER 18 0 1 Oxidation (M) _EAEEVM(ox)DAGCQESAGPER_ EAEEVM(1)DAGCQESAGPER EAEEVM(72.89)DAGCQESAGPER 0 1 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 995.9065 2 990.899119 1979.78368 63053.49 0.66767 0.00066159 -0.45439 -0.00045026 0.21328 0.00021133 991.399684401448 995.903826882797 25.958 0.20684 25.958 25.877 26.084 0 47 11 7 0 0 0 9.6102E-06 1 11486 72.891 68.458 1 0.41671 0.42097 0 9479900 6472600 3007200 6559 1965 2482 2548 10237 10237 1810 EAEEVMDAGCQESAGPER 18 0 1 Oxidation (M) _EAEEVM(ox)DAGCQESAGPER_ EAEEVM(1)DAGCQESAGPER EAEEVM(153.39)DAGCQESAGPER 0 1 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 990.8995 2 990.899119 1979.78368 NaN NaN NaN 0.14033 0.00013906 NaN NaN NaN NaN 25.746 0.24277 25.746 25.607 25.849 0 0 0 0 4.2406E-42 1 11284 153.39 146.51 1 NaN NaN 0 4871900 4871900 0 6560 1965 2482 2548 10238 10238 1810 EAELLEPLMPAIR 13 0 1 Oxidation (M) _EAELLEPLM(ox)PAIR_ EAELLEPLM(1)PAIR EAELLEPLM(71.61)PAIR 0 1 0 P53618;E9PP73 P53618 P53618 COPB1 Coatomer subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.9089 2 749.402709 1496.79087 NaN NaN NaN 0.20744 0.00015545 NaN NaN NaN NaN 105.54 0.45073 105.54 105.29 105.74 0 0 0 0 0.00065544 1 67028 71.614 56.024 1 NaN NaN 0 6088200 0 6088200 6561 1606 2483 2549 10239 10239 1394 EAESCDCLQGFQLTHSLGGGTGSGMGTLLLSK 32 1 0 Unmodified _EAESCDCLQGFQLTHSLGGGTGSGMGTLLLSK_ 0 0 0 Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00 Q3ZCM7 Q3ZCM7 TUBB8 Tubulin beta-8 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1107.5228 3 1104.51621 3310.52681 57140.27 0.25626 0.00028304 -0.5987 -0.00066127 -0.34244 -0.00037823 1105.18480817531 1107.85477960022 125.57 0.76043 125.57 125.22 125.98 0 203 30 13 0 0 0 6.4416E-78 3 75334 157.43 0 1 1.5574 1.3042 0 51267000 20463000 30804000 6562 1778 2484 2550 10240;10241;10242 10242 EAESCDCLQGFQLTHSLGGGTGSGMGTLLLSK 32 1 0 Unmodified _EAESCDCLQGFQLTHSLGGGTGSGMGTLLLSK_ 0 0 0 Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00 Q3ZCM7 Q3ZCM7 TUBB8 Tubulin beta-8 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1107.5221 3 1104.51621 3310.52681 56922.7 0.25917 0.00028626 -0.6365 -0.00070303 -0.37733 -0.00041677 1104.85087894771 1107.52203220238 125.39 0.72122 125.39 125.18 125.9 0 226 32 14 0 0 0 3.4357E-44 2 74329 118.22 0 1 1.5369 1.2973 0 55991000 20377000 35614000 6563 1778 2484 2550 10243;10244 10244 EAEYEESVAK 10 1 0 Unmodified _EAEYEESVAK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.7649 2 577.764226 1153.5139 77427.2 0.48154 0.00027822 0.041544 2.4003E-05 0.52308 0.00030222 577.764187654341 581.771203514758 25.001 0.46331 25.001 24.772 25.236 0 123 23 8 0 0 0 2.2478E-09 3 10629 128.38 116.34 1 0.922 1.042 0 105710000 53029000 52684000 6564 1827 2485 2551 10245;10246;10247 10247 EAEYEESVAK 10 1 0 Unmodified _EAEYEESVAK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.7722 2 577.764226 1153.5139 78556.2 0.83804 0.00048419 0.2018 0.00011659 1.0398 0.00060079 577.764193649482 581.771327438313 24.797 0.54436 24.797 24.494 25.038 0 106 24 8 0 0 0 5.1419E-10 2 10426 135.79 122.41 1 0.88713 0.9954 0 77199000 41750000 35450000 6565 1827 2485 2551 10248;10249 10248 EAEYEESVAK 10 1 0 Unmodified _EAEYEESVAK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.7717 2 577.764226 1153.5139 78723.59 0.47675 0.00027545 0.16961 9.7994E-05 0.64636 0.00037344 577.764277479945 581.771280337994 28.083 0.63601 28.083 27.702 28.338 0 152 29 8 0 0 0 0.00072198 2 11062 82.287 67.136 1 1.3075 1.0235 0 11684000 4928900 6754800 6566 1827 2485 2551 10250;10251 10250 EAEYEESVAK 10 1 0 Unmodified _EAEYEESVAK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.7713 2 577.764226 1153.5139 80031.92 0.10222 5.9061E-05 0.19973 0.0001154 0.30196 0.00017446 577.764083694741 581.771372307398 28.227 0.32532 28.227 28.042 28.367 -1.9073E-06 64 13 7 0 0 0 0.00061581 2 10669 83.998 68.847 1 1.29 1.0089 0 3392100 1456900 1935200 6567 1827 2485 2551 10252;10253 10252 EAFAGDDVIR 10 0 1 Unmodified _EAFAGDDVIR_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.7732 2 546.769645 1091.52474 NaN NaN NaN 1.923 0.0010515 NaN NaN NaN NaN 59.893 0.46304 59.893 59.587 60.05 0 0 0 0 1.972E-08 1 34086 116.73 66.603 1 NaN NaN 0 41531000 0 41531000 6568 2008;393 2486 2552 10254 10254 EAFAGDDVIR 10 0 1 Unmodified _EAFAGDDVIR_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.7695 2 546.769645 1091.52474 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.858 1 59.858 59.358 60.358 -3.8147E-06 0 0 0 1.0349E-08 1 34144 117.81 57.023 1 6569 2008;393 2486 2552 10255 10255 EAFAGDDVIR 10 0 1 Unmodified _EAFAGDDVIR_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.7739 2 546.769645 1091.52474 NaN NaN NaN 1.8143 0.000992 NaN NaN NaN NaN 58.702 0.55775 58.702 58.502 59.06 0 0 0 0 6.5739E-06 1 34103 105.1 62.187 1 NaN NaN 0 44572000 0 44572000 6570 2008;393 2486 2552 10256 10256 EAFAGDDVIR 10 0 1 Unmodified _EAFAGDDVIR_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.7696 2 546.769645 1091.52474 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.68 1 58.68 58.18 59.18 -3.8147E-06 0 0 0 1.5861E-22 1 34127 149.57 80.189 1 6571 2008;393 2486 2552 10257 10257 EAFAGDDVIR 10 0 1 Unmodified _EAFAGDDVIR_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.7744 2 546.769645 1091.52474 NaN NaN NaN 1.7954 0.00098168 NaN NaN NaN NaN 69.235 0.60244 69.235 68.88 69.483 -7.6294E-06 0 0 0 0.019613 2 36407 54.722 42.515 1 NaN NaN 0 3933000 0 3933000 6572 2008;393 2486 2552 10258;10259 10259 EAFAGDDVIRDFLK 14 1 1 Unmodified _EAFAGDDVIRDFLK_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.6063 3 532.606984 1594.79912 83789.05 0.75663 0.00040299 -0.24198 -0.00012888 0.51465 0.00027411 532.606896513739 538.614211229237 113.96 0.60428 113.96 113.67 114.27 0 184 43 6 0 0 0 0.0029075 2 72105 42.317 32.517 1 1.0797 1.1629 0 11310000 4833100 6476700 6573 2008;393 2487 2553 10260;10261 10261 EAFAGDDVIRDFLK 14 1 1 Unmodified _EAFAGDDVIRDFLK_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.6149 3 532.606984 1594.79912 83162.95 0.60038 0.00031977 -0.17523 -9.3327E-05 0.42516 0.00022644 532.606856287873 538.614305237598 113.16 0.63321 113.16 112.87 113.5 -7.6294E-06 185 43 6 0 0 0 0.0030791 2 73198 46.704 43.526 1 1.001 1.1489 0 24425000 12939000 11486000 6574 2008;393 2487 2553 10262;10263 10262 EAFAGDDVIRDFLK 14 1 1 Unmodified _EAFAGDDVIRDFLK_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.4189 2 798.406837 1594.79912 67390.94 0.76559 0.00061125 0.18308 0.00014617 0.94867 0.00075742 799.411105542793 807.417417434528 113.16 0.57658 113.16 112.87 113.44 7.6294E-06 183 39 6 0 0 0 0.00065157 2 73356 81.709 69.978 1 1.146 1.299 0 16913000 8186500 8726000 6575 2008;393 2487 2553 10264;10265 10264 EAFAGDDVIRDFLK 14 1 1 Unmodified _EAFAGDDVIRDFLK_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.6155 3 532.606984 1594.79912 82035.81 0.66447 0.0003539 -0.26502 -0.00014115 0.39944 0.00021275 532.606867591044 538.614273532759 124.42 1.1252 124.42 124.07 125.19 0 229 49 8 0 0 0 0.02411 2 74389 29.355 24.789 1 1.4497 1.2338 0 9237100 4140100 5097000 6576 2008;393 2487 2553 10266;10267 10266 EAFAGDDVIRDFLK 14 1 1 Unmodified _EAFAGDDVIRDFLK_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.6147 3 532.606984 1594.79912 82679.1 0.64707 0.00034463 -0.28968 -0.00015428 0.35739 0.00019035 532.606803242386 538.614306385282 124.15 1.0445 124.15 123.91 124.95 -7.6294E-06 212 45 9 0 0 0 0.013755 2 73390 30.874 26.307 1 1.597 1.3475 0 8899400 3631300 5268200 6577 2008;393 2487 2553 10268;10269 10269 EAFEQPQTSSTPPR 14 0 1 Unmodified _EAFEQPQTSSTPPR_ 0 0 0 B5BU16;A8K3Y2;P52564;A0A0A0MRF7;K7EIW3;Q6MZH7 B5BU16 B5BU16 MAP2K6;DKFZp686N0154 Dual specificity mitogen-activated protein kinase kinase 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.882 2 787.875901 1573.73725 NaN NaN NaN -0.69905 -0.00055077 NaN NaN NaN NaN 37.849 0.35029 37.849 37.682 38.032 0 0 0 0 0.00072171 1 19821 77.062 70.373 1 NaN NaN 0 8522700 0 8522700 6578 728 2488 2554 10270 10270 EAFFHQELPLYIPPPIFSR 19 0 1 Unmodified _EAFFHQELPLYIPPPIFSR_ 0 0 0 Q9Y5Q8;Q5T7U1;Q5T7U0;Q5T7U4;B7Z1V3 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.7391 3 767.740401 2300.19938 75432.35 0.84096 0.00064564 0.74201 0.00056967 1.583 0.0012153 767.739895855371 771.412838280003 132.83 0.72198 132.83 132.47 133.19 0 111 35 6 0 0 0 6.968E-05 2 86989 45.704 45.704 1 1.2112 1.2414 0 6549600 2283900 4265700 6579 2149 2489 2555 10271;10272 10272 EAFGFIER 8 0 1 Unmodified _EAFGFIER_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;E9PNG3 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.7491 2 484.745442 967.476331 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.809 1 78.809 78.309 79.309 0 0 0 0 0.014111 1 46704 71.501 40.212 1 6580 42 2490 2556 10273 10273 EAFGFIER 8 0 1 Unmodified _EAFGFIER_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;E9PNG3 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7452 2 484.745442 967.476331 NaN NaN NaN -0.41554 -0.00020143 NaN NaN NaN NaN 77.526 0.61433 77.526 77.252 77.866 0 0 0 0 0.043528 1 46966 52.482 42.732 1 NaN NaN 0 7749100 7749100 0 6581 42 2490 2556 10274 10274 EAFLQEVWK 9 1 0 Unmodified _EAFLQEVWK_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3087 2 575.300581 1148.58661 82508.34 0.70306 0.00040447 -0.58375 -0.00033583 0.1193 6.8636E-05 575.300117755966 579.307564466888 100.19 0.64379 100.19 99.743 100.39 0 137 51 4 0 0 0 0.0015079 2 62807 84.498 61.478 1 0.64293 0.65985 0 11750000 8033200 3717100 6582 363 2491 2557 10275;10276 10275 EAFQLFDR 8 0 1 Unmodified _EAFQLFDR_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;G3V1Y7 F8W1R7 F8W1R7 MYL6 Myosin light polypeptide 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.2609 2 513.256174 1024.49779 83688.57 0.5519 0.00028327 -0.30696 -0.00015755 0.24495 0.00012572 513.256274518562 518.259369805322 86.312 1.3824 86.312 85.328 86.71 7.6294E-06 330 110 8 0 0 0 0.00082191 2 51917 127.02 106.36 1 1.4054 1.6259 0 164130000 77642000 86491000 6583 1101 2492 2558 10277;10278 10278 EAFQLFDR 8 0 1 Unmodified _EAFQLFDR_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;G3V1Y7 F8W1R7 F8W1R7 MYL6 Myosin light polypeptide 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.2567 2 513.256174 1024.49779 84193.82 0.5232 0.00026854 0.036044 1.85E-05 0.55925 0.00028704 513.256069652403 518.26027093227 85.246 0.67851 85.246 84.884 85.563 0 262 56 7 0 0 0 0.00062584 2 52323 129.72 114.28 1 1.4018 1.5952 0 126640000 50741000 75902000 6584 1101 2492 2558 10279;10280 10280 EAFQLFDR 8 0 1 Unmodified _EAFQLFDR_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;G3V1Y7 F8W1R7 F8W1R7 MYL6 Myosin light polypeptide 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.2564 2 513.256174 1024.49779 84635.16 0.44282 0.00022728 -0.0035341 -1.8139E-06 0.43928 0.00022546 513.256039091262 518.260297398299 98.051 0.73479 98.051 97.698 98.433 7.6294E-06 182 48 5 0 0 0 0.0087497 2 55237 77.282 66.409 1 1.7401 1.4968 0 7642200 2540500 5101700 6585 1101 2492 2558 10281;10282 10281 EAFQLFDR 8 0 1 Unmodified _EAFQLFDR_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;G3V1Y7 F8W1R7 F8W1R7 MYL6 Myosin light polypeptide 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.2563 2 513.256174 1024.49779 85174.92 0.33854 0.00017376 0.24721 0.00012688 0.58575 0.00030064 513.256058482519 518.260429997673 97.914 0.70612 97.914 97.6 98.306 0 202 43 6 0 0 0 0.0091076 2 54368 75.738 64.865 1 1.76 1.464 0 6096900 2224300 3872600 6586 1101 2492 2558 10283;10284 10283 EAFSLFDK 8 1 0 Unmodified _EAFSLFDK_ 0 0 0 Q9BRL5;P0DP25;P0DP24;P0DP23;B4DJ51;B2RDW0;H0Y7A7;F8WBR5;M0QZ52;G3V479;E7ETZ0;E7EMB3;A8K1M2;P27482 Q9BRL5 Q9BRL5 CALM3;CALM2;CALM1;CALML3 Calmodulin-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.7396 2 478.739825 955.465098 87682.54 0.20605 9.8643E-05 0.73807 0.00035334 0.94411 0.00045198 478.740070967594 482.747183120776 86.304 0.77078 86.304 85.859 86.63 -7.6294E-06 298 61 6 0 0 0 0.023225 2 51796 56.659 35.712 1 1.1115 1.2567 0 84806000 40619000 44187000 6587 890 2493 2559 10285;10286 10286 EAFTADGDQVFAGR 14 0 1 Unmodified _EAFTADGDQVFAGR_ 0 0 0 Q96SB8;C9JMN1 Q96SB8 Q96SB8 SMC6 Structural maintenance of chromosomes protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.3455 2 742.344237 1482.67392 NaN NaN NaN 1.0255 0.00076127 NaN NaN NaN NaN 74.601 0.083549 74.601 74.574 74.658 0 0 0 0 0.024077 1 43832 42.556 26.984 1 NaN NaN 0 5225400 5225400 0 6588 1989 2494 2560 10287 10287 EAGAGGLAIAVEGPSK 16 1 0 Unmodified _EAGAGGLAIAVEGPSK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5C6;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.8885 2 713.880456 1425.74636 72478.19 0.90201 0.00064393 0.84928 0.00060629 1.7513 0.0012502 714.382821867983 717.888660615433 75.324 0.41923 75.324 75.093 75.513 0 162 33 6 0 0 0 1.407E-13 2 44207 125.03 117.65 1 1.8873 2.0477 0 45441000 16828000 28613000 6589 1504 2495 2561 10288;10289 10288 EAGAGGLSIAVEGPSK 16 1 0 Unmodified _EAGAGGLSIAVEGPSK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.3873 2 721.877913 1441.74127 72180.99 0.57676 0.00041635 -0.0045409 -3.278E-06 0.57222 0.00041307 721.877745145359 725.884981002084 71.059 0.61155 71.059 70.664 71.276 0 117 46 5 0 0 0 1.0638E-06 2 42538 96.745 96.745 1 1.8188 1.8381 0 8595000 3470100 5124900 6590 1402 2496 2562 10290;10291 10290 EAGAGGLSIAVEGPSK 16 1 0 Unmodified _EAGAGGLSIAVEGPSK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.8861 2 721.877913 1441.74127 74737.41 0.66529 0.00048026 -0.24518 -0.00017699 0.42012 0.00030327 721.877497853749 725.885050448791 82.296 0.5643 82.296 82.047 82.611 0 99 32 6 0 0 0 0.0033605 1 44733 36.944 36.944 1 2.2507 1.9092 0 1478600 643130 835500 6591 1402 2496 2562 10292 10292 EAGDFYYMAGNK 12 1 0 Oxidation (M) _EAGDFYYM(ox)AGNK_ EAGDFYYM(1)AGNK EAGDFYYM(40.99)AGNK 0 1 0 W5ZR30;Q9UGU0;I3L1M7 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.2896 2 691.290085 1380.56562 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.164 1 45.164 44.664 45.664 -3.8147E-06 0 0 0 0.028632 1 24755 40.994 36.543 1 6592 2100 2497 2563 10293 10293 1923 EAGDVCYADVQK 12 1 0 Unmodified _EAGDVCYADVQK_ 0 0 0 Q13242;H0YIB4 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.8083 2 677.800817 1353.58708 NaN NaN NaN -0.10479 -7.1025E-05 NaN NaN NaN NaN 35.923 0.60072 35.923 35.674 36.274 0 0 0 0 2.7608E-05 1 18047 99.53 95.079 1 NaN NaN 0 8382700 0 8382700 6593 1709 2498 2564 10294 10294 EAGDVCYADVQK 12 1 0 Unmodified _EAGDVCYADVQK_ 0 0 0 Q13242;H0YIB4 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.8081 2 677.800817 1353.58708 75598.2 0.46901 0.00031789 -0.21951 -0.00014878 0.2495 0.00016911 677.800743572986 681.807731892132 41.425 0.54971 41.425 41.12 41.67 0 190 42 7 0 0 0 0.00035606 1 19190 72.2 72.2 1 1.1077 0.8757 0 3047500 1468100 1579300 6594 1709 2498 2564 10295 10295 EAGDVCYADVQK 12 1 0 Unmodified _EAGDVCYADVQK_ 0 0 0 Q13242;H0YIB4 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.8015 2 677.800817 1353.58708 72403.6 0.31492 0.00021345 -0.21111 -0.00014309 0.10382 7.0366E-05 677.800918550795 681.807709856481 41.741 0.52648 41.741 41.501 42.028 0 163 39 6 0 0 0 0.005392 2 18833 51.064 45.283 1 1.1563 0.93779 0 2799000 1135600 1663300 6595 1709 2498 2564 10296;10297 10297 EAGDVCYADVYR 12 0 1 Unmodified _EAGDVCYADVYR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3109 2 709.306266 1416.59798 70754.63 0.6479 0.00045956 0.11876 8.424E-05 0.76667 0.0005438 709.306391387203 714.310363093045 58.751 0.84484 58.751 58.399 59.244 0 489 68 9 0 0 0 9.786E-18 2 33179 140.16 140.16 1 1.0667 1.2425 0 188800000 88300000 100500000 6596 1333 2499 2565 10298;10299 10298 EAGDVCYADVYR 12 0 1 Unmodified _EAGDVCYADVYR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.3098 2 709.306266 1416.59798 70540.93 0.65287 0.00046309 -0.72931 -0.0005173 -0.076437 -5.4217E-05 709.305565690646 714.309893831855 57.737 0.89819 57.737 57.375 58.274 3.8147E-06 518 72 9 0 0 0 5.0945E-08 2 33250 113.93 113.93 1 1.0959 1.2508 0 144270000 65088000 79185000 6597 1333 2499 2565 10300;10301 10300 EAGDVCYADVYR 12 0 1 Unmodified _EAGDVCYADVYR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.8077 2 709.306266 1416.59798 70229.61 0.6187 0.00043885 -0.74694 -0.00052981 -0.12823 -9.0957E-05 709.305697607193 714.309935386043 68.406 0.77433 68.406 68.096 68.87 0 364 56 10 0 0 0 0.00018473 4 35664 90.827 90.827 1 0.58626 0.49105 0 25023000 14580000 10443000 6598 1333 2499 2565 10302;10303;10304;10305 10303 EAGDVCYADVYR 12 0 1 Unmodified _EAGDVCYADVYR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.3118 2 709.306266 1416.59798 70522.68 0.5481 0.00038877 -0.00022782 -1.6159E-07 0.54787 0.00038861 709.306285568233 714.310362397789 69.053 0.83838 69.053 68.733 69.571 0 368 58 10 0 0 0 0.00042215 2 35249 71.221 71.221 1 0.59322 0.51372 0 23482000 15114000 8368600 6599 1333 2499 2565 10306;10307 10307 EAGEDEEGFLSK 12 1 0 Unmodified _EAGEDEEGFLSK_ 0 0 0 Q59E88;Q53G26;Q96EY1 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.7982 2 655.790972 1309.56739 76623.26 0.42201 0.00027675 0.55811 0.000366 0.98012 0.00064275 655.791491409806 660.299855252835 50.189 0.46836 50.189 49.981 50.449 0 116 44 4 0 0 0 0.00042215 1 27624 71.221 57.014 1 1.354 1.3297 0 20307000 8645800 11661000 6600 1786 2500 2566 10308 10308 EAGEDEEGFLSK 12 1 0 Unmodified _EAGEDEEGFLSK_ 0 0 0 Q59E88;Q53G26;Q96EY1 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.7982 2 655.790972 1309.56739 75661.81 0.55494 0.00036392 0.29161 0.00019123 0.84654 0.00055516 655.791457847996 659.798006864855 49.009 0.58278 49.009 48.801 49.384 0 140 50 6 0 0 0 9.1905E-06 1 27468 108.43 85.718 1 1.4812 1.5872 0 21274000 8479400 12795000 6601 1786 2500 2566 10309 10309 EAGEDEEGFLSK 12 1 0 Unmodified _EAGEDEEGFLSK_ 0 0 0 Q59E88;Q53G26;Q96EY1 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.7914 2 655.790972 1309.56739 76646.3 0.7699 0.00050489 0.16785 0.00011007 0.93775 0.00061497 655.790560034951 659.798280932955 57.741 0.48109 57.741 57.524 58.005 3.8147E-06 143 35 5 0 0 0 0.0029259 1 29270 57.348 51.085 1 0.95602 0.74531 0 3305700 1816200 1489400 6602 1786 2500 2566 10310 10310 EAGEDEEGFLSK 12 1 0 Unmodified _EAGEDEEGFLSK_ 0 0 0 Q59E88;Q53G26;Q96EY1 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.7986 2 655.790972 1309.56739 76052.92 0.57143 0.00037474 0.11597 7.6053E-05 0.6874 0.00045079 655.790540016799 659.798202898509 58.236 0.53838 58.236 58.019 58.558 0 164 39 6 0 0 0 0.00024935 1 28922 73.781 65.088 1 1.071 0.85762 0 2443200 1152500 1290600 6603 1786 2500 2566 10311 10311 EAGELKPEEEITVGPVQK 18 2 0 Unmodified _EAGELKPEEEITVGPVQK_ 0 0 1 P53618 P53618 P53618 COPB1 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.0194 3 651.677355 1952.01024 75580.97 0.77806 0.00050704 0.1834 0.00011952 0.96146 0.00062656 651.67756469378 657.020167880103 69.261 0.51495 69.261 69.018 69.533 0 213 43 6 0 0 0 3.6239E-08 1 40158 82.707 82.707 1 1.6304 1.9334 0 27407000 9811000 17596000 6604 1606 2501 2567 10312 10312 EAGELKPEEEITVGPVQK 18 2 0 Unmodified _EAGELKPEEEITVGPVQK_ 0 0 1 P53618 P53618 P53618 COPB1 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.0207 3 651.677355 1952.01024 75406.77 0.6663 0.00043421 0.32026 0.00020871 0.98656 0.00064292 652.011639666306 657.354567202249 68.016 0.54137 68.016 67.702 68.243 0 240 46 7 0 0 0 1.5721E-05 1 40288 50.787 41.504 1 1.6215 1.8663 0 25870000 9651500 16218000 6605 1606 2501 2567 10313 10313 EAGENAPVLSDDELVSMSVR 20 0 1 Oxidation (M) _EAGENAPVLSDDELVSM(ox)SVR_ EAGENAPVLSDDELVSM(1)SVR EAGENAPVLSDDELVSM(57.14)SVR 0 1 0 A0A024R804;A8WFP5;O60675 A0A024R804 A0A024R804 MAFK Transcription factor MafK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1072.507 2 1067.50207 2132.98958 59028.88 0.66143 0.00070608 -0.15868 -0.00016939 0.50276 0.00053669 1068.00331528476 1072.50638177065 92.159 0.65443 92.16 91.836 92.491 7.6294E-06 293 62 6 0 0 0 2.4542E-06 1 55675 57.136 57.136 1 1.7466 1.782 0 30731000 12982000 17749000 6606 239 2502 2568 10314 10314 179 EAGENAPVLSDDELVSMSVR 20 0 1 Oxidation (M) _EAGENAPVLSDDELVSM(ox)SVR_ EAGENAPVLSDDELVSM(1)SVR EAGENAPVLSDDELVSM(71.34)SVR 0 1 0 A0A024R804;A8WFP5;O60675 A0A024R804 A0A024R804 MAFK Transcription factor MafK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1073.0077 2 1067.50207 2132.98958 59375 0.41678 0.00044492 -0.032818 -3.5033E-05 0.38397 0.00040989 1068.00336889415 1072.50629168343 91.543 0.58044 91.543 91.285 91.865 7.6294E-06 232 50 6 0 0 0 8.9722E-07 4 56526 71.344 71.344 1 1.8196 1.9899 0 34872000 12560000 22312000 6607 239 2502 2568 10315;10316;10317;10318 10315 179 EAGENAPVLSDDELVSMSVR 20 0 1 Unmodified _EAGENAPVLSDDELVSMSVR_ 0 0 0 A0A024R804;A8WFP5;O60675 A0A024R804 A0A024R804 MAFK Transcription factor MafK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1064.5088 2 1059.50461 2116.99466 58030.8 0.39517 0.00041868 -0.37014 -0.00039217 0.025021 2.651E-05 1060.00365286856 1064.50896235877 118.41 0.4615 118.41 118.13 118.59 0 77 18 6 0 0 0 0.00015906 1 69854 40.278 32.733 1 2.1143 1.8038 0 5633800 1537100 4096700 6608 239 2502 2569 10319 10319 EAGENAPVLSDDELVSMSVR 20 0 1 Unmodified _EAGENAPVLSDDELVSMSVR_ 0 0 0 A0A024R804;A8WFP5;O60675 A0A024R804 A0A024R804 MAFK Transcription factor MafK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1065.0098 2 1059.50461 2116.99466 58260.88 0.1975 0.00020926 -0.32279 -0.000342 -0.12529 -0.00013274 1059.50353599327 1064.50865971604 118.21 0.44371 118.21 118.02 118.46 0 90 19 7 0 0 0 0.0064117 1 68828 26.435 21.452 1 1.6676 1.3836 0 5674500 2212400 3462100 6609 239 2502 2569 10320 10320 EAGEQGDIEPR 11 0 1 Unmodified _EAGEQGDIEPR_ 0 0 0 Q6FI03;Q5U0Q1;Q13283;B7Z8K4;Q6ZP53;Q32P45 Q6FI03 Q6FI03 G3BP;DKFZp686L1159;G3BP1 Ras GTPase-activating protein-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.7831 2 600.778199 1199.54184 NaN NaN NaN 0.53223 0.00031975 NaN NaN NaN NaN 22.744 0.29927 22.744 22.588 22.887 0 0 0 0 0.013418 1 8742 55.084 38.142 1 NaN NaN 0 6238900 0 6238900 6610 1710 2503 2570 10321 10321 EAGFGGGPNATITTSLK 17 1 0 Unmodified _EAGFGGGPNATITTSLK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.9142 2 810.915027 1619.8155 68763.59 0.58977 0.00047825 -0.20976 -0.0001701 0.38001 0.00030815 810.913983114562 814.922377844247 79.432 0.49846 79.432 79.189 79.688 7.6294E-06 226 44 7 0 0 0 1.6202E-05 2 47061 84.468 84.468 1 1.7477 1.847 0 31064000 11683000 19381000 6611 1450 2504 2571 10322;10323 10323 EAGFGGGPNATITTSLK 17 1 0 Unmodified _EAGFGGGPNATITTSLK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.9152 2 810.915027 1619.8155 67868.18 0.3418 0.00027717 0.32897 0.00026676 0.67076 0.00054393 810.915530094947 814.922335801259 78.455 0.67267 78.455 78.195 78.868 0 268 57 7 0 0 0 5.1669E-45 2 47529 166.62 166.62 1 1.2183 1.3738 0 62019000 28080000 33939000 6612 1450 2504 2571 10324;10325 10325 EAGFGGGPNATITTSLK 17 1 0 Unmodified _EAGFGGGPNATITTSLK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 814.9221 2 810.915027 1619.8155 67810.92 0.85218 0.00069105 -0.15984 -0.00012962 0.69234 0.00056143 810.914989931497 814.922085429843 91.029 0.69453 91.029 90.762 91.456 0 271 43 9 0 0 0 0.012777 2 50407 29.981 27.361 1 1.8825 1.5058 0 20574000 7221300 13353000 6613 1450 2504 2571 10326;10327 10326 EAGFGGGPNATITTSLK 17 1 0 Unmodified _EAGFGGGPNATITTSLK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 810.9149 2 810.915027 1619.8155 68157.32 0.54534 0.00044223 -0.3383 -0.00027433 0.20704 0.00016789 810.914812531217 814.921933694729 90.913 0.69471 90.913 90.588 91.283 0 268 40 10 0 0 0 0.0019001 2 49548 37.594 37.594 1 1.9444 1.5593 0 21955000 7671200 14283000 6614 1450 2504 2571 10328;10329 10329 EAGGNYTPALTEQEVYAQVAR 21 0 1 Unmodified _EAGGNYTPALTEQEVYAQVAR_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1134.5541 2 1134.05057 2266.08659 61070.23 0.3258 0.00036947 0.76848 0.0008715 1.0943 0.001241 1134.05239613626 1139.55649936278 98.067 0.16328 98.067 97.971 98.134 -7.6294E-06 33 14 5 0 0 0 2.1693E-11 1 61344 96.734 89.532 1 0.69052 0.69729 0 10136000 7309300 2826600 6615 1990 2505 2572 10330 10330 EAGLSNAAFESDFK 14 1 0 Unmodified _EAGLSNAAFESDFK_ 0 0 0 B2R6H3;Q8NI77;Q4G194 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.3549 2 743.346446 1484.67834 71830.36 0.80976 0.00060193 -0.16791 -0.00012481 0.64185 0.00047712 743.847786464664 747.353523319195 81.761 0.50188 81.761 81.545 82.046 0 161 43 6 0 0 0 0.00095154 1 48685 57.164 50.475 1 0.75987 0.7472 0 20018000 14095000 5922600 6616 842 2506 2573 10331 10331 EAGLSNAAFESDFK 14 1 0 Unmodified _EAGLSNAAFESDFK_ 0 0 0 B2R6H3;Q8NI77;Q4G194 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.8563 2 743.346446 1484.67834 72023.31 0.77045 0.00057271 0.15109 0.00011231 0.92154 0.00068502 743.34617720609 747.353215717641 80.759 0.43586 80.759 80.614 81.05 0 148 34 6 0 0 0 7.0893E-05 1 49244 89.9 82.251 1 0.71053 0.7324 0 18199000 10397000 7802300 6617 842 2506 2573 10332 10332 EAGLSNAAFESDFK 14 1 0 Unmodified _EAGLSNAAFESDFK_ 0 0 0 B2R6H3;Q8NI77;Q4G194 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.3539 2 743.346446 1484.67834 68448.19 0.80488 0.00059831 0.084295 6.266E-05 0.88918 0.00066097 743.847908075965 747.353263706169 93.754 0.41606 93.754 93.537 93.953 0 107 28 5 0 0 0 0.014175 1 52394 35.594 32.294 1 1.0515 0.86136 0 2594500 883980 1710500 6618 842 2506 2573 10333 10333 EAGLVAQHPPAR 12 0 1 Unmodified _EAGLVAQHPPAR_ 0 0 0 C9JQV0;Q9BRJ6;A0A024R836;H7C0T1;H7C2R9 C9JQV0 C9JQV0 C7orf50;MGC11257 Uncharacterized protein C7orf50 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.3387 2 623.338561 1244.66257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.205 1 24.205 23.705 24.705 -1.9073E-06 0 0 0 0.00027855 1 9980 82.287 63.016 1 6619 1141 2507 2574 10334 10334 EAGNINQSLLTLGR 14 0 1 Unmodified _EAGNINQSLLTLGR_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.4102 2 743.404629 1484.79471 NaN NaN NaN 0.38228 0.00028419 NaN NaN NaN NaN 92.382 0.58955 92.382 92.06 92.649 0 0 0 0 0.00062534 1 55876 77.867 66.648 1 NaN NaN 0 16078000 0 16078000 6620 1602 2508 2575 10335 10335 EAGNINQSLMTLR 13 0 1 Oxidation (M) _EAGNINQSLM(ox)TLR_ EAGNINQSLM(1)TLR EAGNINQSLM(78.12)TLR 0 1 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.8701 2 731.869565 1461.72458 71694.3 0.42994 0.00031466 -0.39787 -0.00029119 0.032065 2.3467E-05 731.869611775365 736.873988403489 65.056 0.66359 65.056 64.649 65.313 0 186 57 5 0 0 0 6.0435E-05 2 37386 78.116 66.548 1 0.97874 1.005 0 14309000 7794400 6514900 6621 1312 2509 2576 10336;10337 10336 996 EAGNINQSLMTLR 13 0 1 Oxidation (M) _EAGNINQSLM(ox)TLR_ EAGNINQSLM(1)TLR EAGNINQSLM(98.9)TLR 0 1 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.8697 2 731.869565 1461.72458 NaN NaN NaN -0.22902 -0.00016762 NaN NaN NaN NaN 63.874 0.64962 63.874 63.543 64.192 0 0 0 0 2.8901E-06 1 37575 98.898 85.129 1 NaN NaN 0 8659000 8659000 0 6622 1312 2509 2576 10338 10338 996 EAGNINQSLMTLR 13 0 1 Oxidation (M) _EAGNINQSLM(ox)TLR_ EAGNINQSLM(1)TLR EAGNINQSLM(52.25)TLR 0 1 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.8748 2 731.869565 1461.72458 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.042 1 64.042 63.542 64.542 0 0 0 0 0.0059553 1 37679 52.247 37.567 1 6623 1312 2509 2576 10339 10339 996 EAGNINTSLHTLGR 14 0 1 Unmodified _EAGNINTSLHTLGR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.3891 2 741.886604 1481.75865 NaN NaN NaN 0.35041 0.00025997 NaN NaN NaN NaN 48.215 0.43291 48.215 48.003 48.436 0 0 0 0 1.1915E-09 1 26133 110.08 101.18 1 NaN NaN 0 23167000 23167000 0 6624 1421 2510 2577 10340 10340 EAGNINTSLHTLGR 14 0 1 Unmodified _EAGNINTSLHTLGR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2618 3 494.926828 1481.75865 84144.13 0.27788 0.00013753 0.013464 6.6635E-06 0.29135 0.00014419 494.926840227125 498.262853731807 55.691 0.57517 55.691 55.416 55.991 0 262 35 10 0 0 0 0.00048553 2 27862 49.482 49.482 1 1.2395 1.0433 0 27621000 12550000 15070000 6625 1421 2510 2577 10341;10342 10342 EAGNINTSLHTLGR 14 0 1 Unmodified _EAGNINTSLHTLGR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 746.8912 2 741.886604 1481.75865 70308.53 0.7568 0.00056146 -0.093331 -6.9241E-05 0.66347 0.00049222 741.886480952113 746.890683613163 55.694 0.46482 55.694 55.428 55.893 0 172 28 8 0 0 0 0.00014466 1 27921 77.674 74.142 1 1.2016 1.0193 0 9262400 4185100 5077300 6626 1421 2510 2577 10343 10343 EAGNINTSLHTLGR 14 0 1 Unmodified _EAGNINTSLHTLGR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.2628 3 494.926828 1481.75865 85939.17 0.14003 6.9304E-05 -0.00014923 -7.3857E-08 0.13988 6.923E-05 494.926832632385 498.262876966421 56.063 0.65532 56.063 55.79 56.445 0 288 45 9 0 0 0 5.4388E-05 2 27507 58.071 58.071 1 1.2634 1.093 0 23224000 10002000 13222000 6627 1421 2510 2577 10344;10345 10345 EAGNINTSLHTLGR 14 0 1 Unmodified _EAGNINTSLHTLGR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 746.8918 2 741.886604 1481.75865 71185.13 0.61816 0.0004586 -0.146 -0.00010831 0.47216 0.00035029 741.88625123223 746.890753708114 56.063 0.47946 56.063 55.836 56.316 -3.8147E-06 205 34 8 0 0 0 0.0069475 1 27510 41.218 41.218 1 1.2441 1.015 0 9427500 3912300 5515200 6628 1421 2510 2577 10346 10346 EAGTDMQESQPTVGLDDETPQLLGPTHK 28 1 0 Oxidation (M) _EAGTDM(ox)QESQPTVGLDDETPQLLGPTHK_ EAGTDM(1)QESQPTVGLDDETPQLLGPTHK EAGTDM(66.45)QESQPTVGLDDETPQLLGPTHK 0 1 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1007.476 3 1004.13638 3009.38732 63710.62 0.19113 0.00019192 -0.068623 -6.8907E-05 0.12251 0.00012301 1004.47071357072 1007.14213853804 86.734 0.38437 86.734 86.596 86.98 0 92 33 5 0 0 0 3.8674E-16 3 53476 66.447 63.405 1 1.001 1.084 0 22088000 8978000 13110000 6629 247 2511 2578 10347;10348;10349 10348 186 EAGVEMGDEDDLSTPNEK 18 1 0 Oxidation (M) _EAGVEM(ox)GDEDDLSTPNEK_ EAGVEM(1)GDEDDLSTPNEK EAGVEM(43.76)GDEDDLSTPNEK 0 1 0 D3DP78;A0A140VJW5;P14868;Q53T60;H7BZ35 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.4137 2 976.407299 1950.80005 NaN NaN NaN 0.063795 6.2289E-05 NaN NaN NaN NaN 42.158 0.57661 42.158 41.818 42.395 0 0 0 0 0.001909 1 22162 43.761 38.155 1 NaN NaN 0 5674500 0 5674500 6630 610 2512 2579 10350 10350 462 EAGVEMGDEDDLSTPNEK 18 1 0 Oxidation (M) _EAGVEM(ox)GDEDDLSTPNEK_ EAGVEM(1)GDEDDLSTPNEK EAGVEM(49.93)GDEDDLSTPNEK 0 1 0 D3DP78;A0A140VJW5;P14868;Q53T60;H7BZ35 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 976.4074 2 976.407299 1950.80005 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.091 1 42.091 41.591 42.591 -3.8147E-06 0 0 0 0.002287 1 22299 49.929 44.084 1 6631 610 2512 2579 10351 10351 462 EAGVFVPR 8 0 1 Unmodified _EAGVFVPR_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;Q8N9C4 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.7417 2 437.742702 873.470852 92479.73 -0.067119 -2.9381E-05 -0.17706 -7.7509E-05 -0.24418 -0.00010689 437.742445093938 442.746831158402 49.614 0.27431 49.614 49.438 49.712 0 54 20 5 0 0 0 0.0080127 1 27916 80.462 55.831 1 1.5147 1.5906 0 22972000 8756700 14215000 6632 89 2513 2580 10352 10352 EAGYPNYLIR 10 0 1 Unmodified _EAGYPNYLIR_ 0 0 0 Q6P0N0;G5E9K5 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.3133 2 598.308938 1194.60332 79159.42 0.49122 0.0002939 -0.067673 -4.049E-05 0.42355 0.00025341 598.309277661273 603.31251297206 86.011 0.55898 86.011 85.666 86.225 0 159 36 6 0 0 0 0.056216 1 47060 35.438 23.483 1 1.3166 1.1075 0 4468800 1921600 2547100 6633 1849 2514 2581 10353 10353 EAGYPNYLIR 10 0 1 Unmodified _EAGYPNYLIR_ 0 0 0 Q6P0N0;G5E9K5 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.3133 2 598.308938 1194.60332 80222.29 0.60794 0.00036374 -0.058846 -3.5208E-05 0.5491 0.00032853 598.308763281861 603.31257692373 86.04 0.81329 86.04 85.686 86.5 0 159 39 6 0 0 0 0.028964 1 46332 43.218 29.5 1 1.2414 1.0977 0 3951900 1695600 2256300 6634 1849 2514 2581 10354 10354 EAHEPLAVADAK 12 1 0 Unmodified _EAHEPLAVADAK_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.8228 2 625.822409 1249.63027 77807.59 0.48309 0.00030233 0.16705 0.00010454 0.65014 0.00040687 625.822283408155 629.829654509907 29.595 0.98152 29.595 29.504 30.486 0 207 84 6 0 0 0 3.4499E-48 1 14328 195.83 173.19 1 0.83391 0.94515 0 97397000 54900000 42497000 6635 2129 2515 2582 10355 10355 EAHEPLAVADAK 12 1 0 Unmodified _EAHEPLAVADAK_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.5505 3 417.550698 1249.63027 95188.3 0.099259 4.1446E-05 0.18493 7.7219E-05 0.28419 0.00011866 417.550681980266 420.22184393421 29.617 0.97928 29.617 29.495 30.474 0 293 84 8 0 0 0 1.6099E-08 3 14655 93.345 83.115 1 0.82513 0.93385 0 151760000 75249000 76512000 6636 2129 2515 2582 10356;10357;10358 10357 EAHEPLAVADAK 12 1 0 Unmodified _EAHEPLAVADAK_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.8225 2 625.822409 1249.63027 76449.88 0.91321 0.0005715 -0.18832 -0.00011785 0.72489 0.00045365 625.822200666224 629.829384613224 29.142 0.6487 29.142 29.017 29.666 0 167 48 8 0 0 0 9.8266E-31 1 13960 175.54 155.25 1 0.69117 0.80902 0 303650000 164840000 138810000 6637 2129 2515 2582 10359 10359 EAHEPLAVADAK 12 1 0 Unmodified _EAHEPLAVADAK_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.5509 3 417.550698 1249.63027 95791.52 0.56651 0.00023655 0.10947 4.5708E-05 0.67598 0.00028226 417.550507405867 420.221984943741 29.142 0.84898 29.142 29.004 29.853 0 179 62 9 0 0 0 3.655E-05 1 14012 78.324 68.331 1 0.87772 1.0311 0 352820000 181810000 171000000 6638 2129 2515 2582 10360 10360 EAHEPLAVADAK 12 1 0 Unmodified _EAHEPLAVADAK_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.8227 2 625.822409 1249.63027 77256.66 0.60421 0.00037813 0.33822 0.00021166 0.94243 0.0005898 625.822106024192 629.829647202373 33.456 0.92136 33.456 33.271 34.192 0 360 81 8 0 0 0 4.1382E-18 2 14593 146.17 146.17 1 0.98844 0.82666 0 50427000 24863000 25563000 6639 2129 2515 2582 10361;10362 10361 EAHEPLAVADAK 12 1 0 Unmodified _EAHEPLAVADAK_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 417.5505 3 417.550698 1249.63027 93453.16 -0.19601 -8.1844E-05 0.41679 0.00017403 0.22078 9.2188E-05 417.550791845924 420.221936596165 33.457 1.2366 33.457 33.271 34.507 3.8147E-06 406 106 8 0 0 0 6.6037E-05 1 14608 69.815 59.627 1 1.1196 0.92509 0 43194000 21073000 22120000 6640 2129 2515 2582 10363 10363 EAHEPLAVADAK 12 1 0 Unmodified _EAHEPLAVADAK_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.822 2 625.822409 1249.63027 78873.07 0.63899 0.00039989 0.044264 2.7702E-05 0.68325 0.00042759 625.821833293597 629.829784879968 34.223 0.3537 34.223 34.142 34.495 0 61 28 4 0 0 0 0.015563 1 15040 42.802 35.907 1 0.82639 0.69686 0 1941300 1316500 624810 6641 2129 2515 2582 10364 10364 EAHEPLAVADAK 12 1 0 Unmodified _EAHEPLAVADAK_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.8221 2 625.822409 1249.63027 76888.01 0.46238 0.00028937 0.25257 0.00015806 0.71495 0.00044743 625.822121270269 629.829596294084 33.51 0.87439 33.51 33.351 34.226 0 344 74 8 0 0 0 3.2666E-23 2 14145 160.98 160.98 1 0.99594 0.83233 0 43703000 22255000 21448000 6642 2129 2515 2582 10365;10366 10365 EAHEPLAVADAK 12 1 0 Unmodified _EAHEPLAVADAK_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 417.5507 3 417.550698 1249.63027 93076.62 -0.42513 -0.00017751 0.52846 0.00022066 0.10333 4.3145E-05 417.550803830111 420.222013543417 33.515 1.1845 33.515 33.351 34.536 0 373 97 8 0 0 0 7.3122E-06 2 14167 83.182 75.426 1 1.1062 0.92029 0 38801000 18369000 20432000 6643 2129 2515 2582 10367;10368 10368 EAHLPVIENK 10 1 0 Unmodified _EAHLPVIENK_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.3167 2 575.316763 1148.61897 NaN NaN NaN -0.5665 -0.00032592 NaN NaN NaN NaN 42.666 0.56022 42.666 42.258 42.818 0 0 0 0 0.013857 1 23064 59.35 41.964 1 NaN NaN 0 11281000 11281000 0 + 6644 1157 2516 2583 10369 10369 EAHQLFLEPEVLDPESVELK 20 1 0 Unmodified _EAHQLFLEPEVLDPESVELK_ 0 0 0 Q6FHX6;P39748;B4DWZ4;I3L3E9 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.4048 3 774.733641 2321.17909 69541.43 1.0043 0.00077807 -0.34014 -0.00026352 0.66417 0.00051455 775.06800361992 777.739178976636 116.42 0.55782 116.42 116.16 116.72 -7.6294E-06 252 37 10 0 0 0 1.1481E-06 2 74213 60.561 60.561 1 1.5835 1.7067 0 37770000 14174000 23596000 6645 1555 2517 2584 10370;10371 10370 EAHQLFLEPEVLDPESVELK 20 1 0 Unmodified _EAHQLFLEPEVLDPESVELK_ 0 0 0 Q6FHX6;P39748;B4DWZ4;I3L3E9 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.74 3 774.733641 2321.17909 69358.68 0.99525 0.00077105 -0.34063 -0.0002639 0.65462 0.00050715 775.068008232959 777.404511432107 115.73 0.56047 115.73 115.45 116.01 0 242 36 10 0 0 0 2.1639E-06 3 75690 52.095 52.095 1 1.4251 1.5495 0 39502000 16648000 22855000 6646 1555 2517 2584 10372;10373;10374 10374 EAHQLFLEPEVLDPESVELK 20 1 0 Unmodified _EAHQLFLEPEVLDPESVELK_ 0 0 0 Q6FHX6;P39748;B4DWZ4;I3L3E9 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.0698 3 774.733641 2321.17909 69297.25 0.75086 0.00058172 0.076152 5.8998E-05 0.82702 0.00064072 775.068227820066 777.739059723659 127.34 0.56944 127.34 127.16 127.73 -7.6294E-06 162 22 10 0 0 0 2.0291E-05 2 76706 45.992 45.992 1 0.59209 0.45932 0 14105000 8769500 5335400 6647 1555 2517 2584 10375;10376 10375 EAHQLFLEPEVLDPESVELK 20 1 0 Unmodified _EAHQLFLEPEVLDPESVELK_ 0 0 0 Q6FHX6;P39748;B4DWZ4;I3L3E9 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.0691 3 774.733641 2321.17909 69277.55 0.79506 0.00061596 -0.089726 -6.9514E-05 0.70533 0.00054644 775.067978021577 777.738965138377 127.24 0.53822 127.24 127 127.54 0 156 22 9 0 0 0 2.2321E-06 1 75674 51.526 51.526 1 0.60301 0.49736 0 11038000 7284100 3754000 6648 1555 2517 2584 10377 10377 EAIANYVK 8 1 0 Unmodified _EAIANYVK_ 0 0 0 J3QL56;O75880 J3QL56 J3QL56 SCO1 Protein SCO1 homolog, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.248 2 454.247818 906.481082 91282.32 0.35981 0.00016344 0.41518 0.0001886 0.77499 0.00035204 454.247596698216 458.255408659309 42.196 0.45904 42.196 41.971 42.43 -3.8147E-06 101 33 4 0 0 0 0.038748 1 22354 47.849 19.63 1 1.3774 1.3574 0 19535000 6443500 13091000 6649 1334 2518 2585 10378 10378 EAIDSPVSFLALHNQIR 17 0 1 Unmodified _EAIDSPVSFLALHNQIR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.6782 3 637.34253 1909.00576 76714.65 1.124 0.00071637 -0.38351 -0.00024443 0.74048 0.00047194 637.676461631507 640.678468739754 108.59 0.61894 108.59 108.23 108.85 0 202 43 7 0 0 0 1.2221E-05 1 67637 79.771 69.714 1 2.3307 2.4178 0 22661000 6829600 15831000 6650 231 2519 2586 10379 10379 EAIDSPVSFLALHNQIR 17 0 1 Unmodified _EAIDSPVSFLALHNQIR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.6797 3 637.34253 1909.00576 77777.21 0.70797 0.00045122 -0.38241 -0.00024373 0.32555 0.00020749 637.676441197966 641.012708302891 107.7 0.58997 107.7 107.4 107.99 7.6294E-06 186 42 7 0 0 0 6.4165E-06 1 68671 83.54 83.54 1 2.1444 2.1303 0 16168000 5930900 10237000 6651 231 2519 2586 10380 10380 EAIDSPVSFLALHNQIR 17 0 1 Unmodified _EAIDSPVSFLALHNQIR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.6794 3 637.34253 1909.00576 76583.36 0.82722 0.00052722 -0.78892 -0.00050281 0.038302 2.4412E-05 637.676862619679 640.678639908661 119.11 0.3903 119.11 118.9 119.29 -7.6294E-06 62 17 6 0 0 0 0.0012251 1 70399 35.64 32.352 1 1.4145 1.1826 0 3590300 1017400 2572900 6652 231 2519 2586 10381 10381 EAIDSPVSFLALHNQIR 17 0 1 Unmodified _EAIDSPVSFLALHNQIR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.678 3 637.34253 1909.00576 79195.99 0.89117 0.00056798 -0.31191 -0.00019879 0.57926 0.00036919 637.675991137489 640.67861361476 118.82 0.35852 118.82 118.65 119.01 0 49 16 5 0 0 0 0.00060714 1 69317 37.083 33.242 1 1.6928 1.4855 0 3595400 1510800 2084600 6653 231 2519 2586 10382 10382 EAIEGTYIDK 10 1 0 Unmodified _EAIEGTYIDK_ 0 0 0 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.7916 2 569.784961 1137.55537 79071.04 0.64651 0.00036837 0.062873 3.5824E-05 0.70939 0.0004042 569.785138855395 573.791876462943 47.266 1.0753 47.266 46.716 47.791 -3.8147E-06 543 98 9 0 0 0 5.006E-06 2 25389 108.98 108.98 1 0.894 1.0704 0 908080000 506780000 401300000 6654 1641 2520 2587 10383;10384 10383 EAIEGTYIDK 10 1 0 Unmodified _EAIEGTYIDK_ 0 0 0 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.7855 2 569.784961 1137.55537 NaN NaN NaN 0.2533 0.00014433 NaN NaN NaN NaN 46.18 1.2988 46.18 45.789 47.088 0 0 0 0 0.0016715 1 25364 89.886 71.9 1 NaN NaN 0 637720000 637720000 0 6655 1641 2520 2587 10385 10385 EAIEGTYIDK 10 1 0 Unmodified _EAIEGTYIDK_ 0 0 0 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.7924 2 569.784961 1137.55537 79948.66 0.56339 0.00032101 -0.28268 -0.00016107 0.28072 0.00015995 569.785168464935 573.791595731581 54.485 2.0876 54.485 54.101 56.188 0 486 142 6 0 0 0 0.0013651 2 27018 73.985 66.295 1 1.0482 0.91481 0 168640000 81766000 86876000 6656 1641 2520 2587 10386;10387 10386 EAIEGTYIDK 10 1 0 Unmodified _EAIEGTYIDK_ 0 0 0 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.7853 2 569.784961 1137.55537 NaN NaN NaN 0.45386 0.0002586 NaN NaN NaN NaN 55.011 2.1779 55.011 54.502 56.68 0 0 0 0 0.028528 1 26769 63.076 42.45 1 NaN NaN 0 67063000 67063000 0 6657 1641 2520 2587 10388 10388 EAIEGTYIDK 10 1 0 Unmodified _EAIEGTYIDK_ 0 0 0 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.7929 2 569.784961 1137.55537 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.736 1 54.736 54.236 55.236 0 0 0 0 6.3276E-05 1 26739 84.213 43.183 1 6658 1641 2520 2587 10389 10389 EAIEGTYIDKK 11 2 0 Unmodified _EAIEGTYIDKK_ 0 0 1 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.8474 2 633.832443 1265.65033 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.635 1 31.635 31.135 32.135 -1.9073E-06 0 0 0 0.030064 1 15627 60.064 40.277 1 6659 1641 2521 2588 10390 10390 EAIEGTYIDKK 11 2 0 Unmodified _EAIEGTYIDKK_ 0 0 1 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.8083 2 633.832443 1265.65033 78968.2 0.55989 0.00035488 -0.11735 -7.4383E-05 0.44254 0.0002805 634.333780476365 641.846430148419 30.964 0.43333 30.964 30.764 31.197 -1.9073E-06 102 37 4 0 0 0 0.024373 1 15235 50.297 39.497 1 0.95303 1.087 0 11699000 6911400 4787300 6660 1641 2521 2588 10391 10391 EAIEGTYIDKK 11 2 0 Unmodified _EAIEGTYIDKK_ 0 0 1 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.8477 2 633.832443 1265.65033 74555.16 0.34534 0.00021889 0.046936 2.9749E-05 0.39228 0.00024864 633.832531486212 641.84690190676 36.572 1.2988 36.572 35.798 37.097 0 515 112 8 0 0 0 0.0027989 2 16479 65.719 47.408 1 1.1588 0.98727 0 23183000 10940000 12242000 6661 1641 2521 2588 10392;10393 10393 EAIEGTYIDKK 11 2 0 Unmodified _EAIEGTYIDKK_ 0 0 1 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.8326 2 633.832443 1265.65033 74204.18 0.50647 0.00032102 -0.47619 -0.00030182 0.030278 1.9191E-05 633.832263111626 641.846667004132 36.63 1.0256 36.63 36.178 37.204 0 476 89 9 0 0 0 0.0018564 1 15874 70.028 42.286 1 1.1418 0.96962 0 25779000 12449000 13331000 6662 1641 2521 2588 10394 10394 EAIETQLAEYHK 12 1 0 Unmodified _EAIETQLAEYHK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3658 2 716.359356 1430.70416 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.051 1 50.051 49.551 50.551 3.8147E-06 0 0 0 0.0010858 1 27611 72.2 41.637 1 6663 696 2522 2589 10395 10395 EAIETQLAEYHK 12 1 0 Unmodified _EAIETQLAEYHK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.8626 2 716.359356 1430.70416 72531.28 0.56535 0.00040499 0.073418 5.2594E-05 0.63877 0.00045759 716.359124666812 720.366261357771 48.801 0.5382 48.801 48.543 49.081 0 103 42 4 0 0 0 5.9175E-05 2 27382 115.82 91.736 1 0.64371 0.6574 0 17256000 11581000 5675000 6664 696 2522 2589 10396;10397 10397 EAIETQLAEYHK 12 1 0 Unmodified _EAIETQLAEYHK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.3668 2 716.359356 1430.70416 71292.65 0.57511 0.00041198 -0.092736 -6.6433E-05 0.48237 0.00034555 716.358875525478 720.366374767428 58.617 0.53097 58.617 58.373 58.904 0 166 42 6 0 0 0 0.0067883 2 29113 48.981 48.981 1 0.97149 0.78887 0 2874300 1588400 1285900 6665 696 2522 2589 10398;10399 10398 EAIIPGSVYDR 11 0 1 Unmodified _EAIIPGSVYDR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;B3KY55;Q6ZUC8 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.3231 2 610.319502 1218.62445 NaN NaN NaN 0.17023 0.00010389 NaN NaN NaN NaN 73.495 0.57558 73.495 73.3 73.875 0 0 0 0 0.016439 1 43112 54.191 32.891 1 NaN NaN 0 9013500 0 9013500 6666 231 2523 2590 10400 10400 EAIIPGSVYDR 11 0 1 Unmodified _EAIIPGSVYDR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;B3KY55;Q6ZUC8 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.3198 2 610.319502 1218.62445 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.597 1 73.597 73.097 74.097 0 0 0 0 0.025935 1 43170 50.834 19.531 1 6667 231 2523 2590 10401 10401 EAIIPGSVYDR 11 0 1 Unmodified _EAIIPGSVYDR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;B3KY55;Q6ZUC8 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.3232 2 610.319502 1218.62445 82267.38 0.48839 0.00029808 -0.52338 -0.00031943 -0.034985 -2.1352E-05 610.318485978525 615.323293792338 72.442 0.50536 72.442 72.238 72.744 0 102 46 4 0 0 0 0.0023604 3 43433 61.765 56.563 1 2.323 2.2852 0 13388000 5280100 8108000 6668 231 2523 2590 10402;10403;10404 10402 EAIIVGSIITK 11 1 0 Unmodified _EAIIVGSIITK_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.3602 2 572.352814 1142.69108 81080.63 0.8338 0.00047723 -0.19592 -0.00011214 0.63788 0.00036509 572.352657265829 576.35973910595 93.811 0.73696 93.811 93.524 94.261 0 286 66 6 0 0 0 0.00060448 1 56832 73.887 45.874 1 1.097 1.2014 0 52242000 23488000 28754000 6669 1724 2524 2591 10405 10405 EAIIVGSIITK 11 1 0 Unmodified _EAIIVGSIITK_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.36 2 572.352814 1142.69108 81047.45 0.76499 0.00043785 -0.36099 -0.00020661 0.404 0.00023123 572.352507368882 576.359681462028 92.913 0.67394 92.913 92.677 93.351 0 235 56 6 0 0 0 0.021359 1 57723 43.308 22.438 1 1.1337 1.2342 0 39724000 17922000 21802000 6670 1724 2524 2591 10406 10406 EAIIVGSIITK 11 1 0 Unmodified _EAIIVGSIITK_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.36 2 572.352814 1142.69108 81745.2 0.52111 0.00029826 0.099761 5.7098E-05 0.62087 0.00035536 572.352737677412 576.359839058385 106.75 0.67972 106.75 106.47 107.15 0 179 41 6 0 0 0 0.017732 1 60203 45.158 16.431 1 1.0202 0.83459 0 5504800 2738800 2766000 6671 1724 2524 2591 10407 10407 EAINVEQAFQTIAR 14 0 1 Unmodified _EAINVEQAFQTIAR_ 0 0 0 A0A158RFU6;P51149;C9J8S3;C9J4V0;C9J4S4 A0A158RFU6 A0A158RFU6 RAB7A Ras-related protein Rab-7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.4172 2 795.417736 1588.82092 66723.7 0.85532 0.00068034 -0.50117 -0.00039864 0.35415 0.0002817 795.416965937704 800.421436968575 123.75 0.50745 123.75 123.53 124.04 7.6294E-06 84 21 6 0 0 0 0.0002233 1 74025 66.023 59.782 1 0.90452 0.77269 0 5763900 3251100 2512900 6672 628 2525 2592 10408 10408 EAINVEQAFQTIAR 14 0 1 Unmodified _EAINVEQAFQTIAR_ 0 0 0 A0A158RFU6;P51149;C9J8S3;C9J4V0;C9J4S4 A0A158RFU6 A0A158RFU6 RAB7A Ras-related protein Rab-7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 795.418 2 795.417736 1588.82092 67470.82 0.84582 0.00067278 -0.27387 -0.00021784 0.57195 0.00045494 795.417431405712 800.421404757535 123.58 0.50789 123.58 123.36 123.87 0 77 19 6 0 0 0 0.00020466 1 72991 68.676 62.435 1 0.98318 0.81927 0 6348800 3538400 2810300 6673 628 2525 2592 10409 10409 EAIQCVDNNQSVLVSAHTSAGK 22 1 0 Unmodified _EAIQCVDNNQSVLVSAHTSAGK_ 0 0 0 P42285;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.0452 3 776.713134 2327.11757 68272.96 0.75612 0.00058729 -0.066795 -5.1881E-05 0.68933 0.00053541 777.047258001617 779.718737249372 57.586 0.46836 57.586 57.365 57.834 0 178 37 7 0 0 0 3.5946E-06 4 32666 47.75 47.75 1 0.82446 0.86302 0 12040000 5000200 7040000 6674 1563 2526 2593 10410;10411;10412;10413 10413 EAIQCVDNNQSVLVSAHTSAGK 22 1 0 Unmodified _EAIQCVDNNQSVLVSAHTSAGK_ 0 0 0 P42285;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 779.387 3 776.713134 2327.11757 68113.03 0.7302 0.00056716 -0.21839 -0.00016962 0.51181 0.00039753 777.047290689792 779.718798837793 67.499 0.57284 67.499 67.218 67.791 0 338 42 10 0 0 0 0.00099211 2 35073 29.576 29.576 1 1.0303 0.82352 0 8975600 3769200 5206400 6675 1563 2526 2593 10414;10415 10414 EAIQCVDNNQSVLVSAHTSAGK 22 1 0 Unmodified _EAIQCVDNNQSVLVSAHTSAGK_ 0 0 0 P42285;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 777.0472 3 776.713134 2327.11757 68440.79 0.56153 0.00043615 -0.45124 -0.00035049 0.11029 8.5662E-05 777.047168051961 779.718797963952 68.074 0.58478 68.074 67.765 68.35 0 343 44 10 0 0 0 0.0014724 2 34674 25.935 25.935 1 1.0633 0.86655 0 7580600 3828800 3751700 6676 1563 2526 2593 10416;10417 10417 EAISDAALEATENEPLNK 18 1 0 Unmodified _EAISDAALEATENEPLNK_ 0 0 0 Q14966;D6W5H1;A8K583;B4E187 Q14966 Q14966 ZNF638 Zinc finger protein 638 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 957.969 2 957.968184 1913.92182 63032.76 0.78916 0.00075599 0.080157 7.6787E-05 0.86931 0.00083277 958.469221622111 962.476728023471 84.892 0.43295 84.892 84.653 85.086 7.6294E-06 105 36 5 0 0 0 2.8607E-05 1 52157 67.234 67.234 1 0.88956 0.91234 0 17683000 9572000 8111100 6677 1746 2527 2594 10418 10418 EAISDAALEATENEPLNK 18 1 0 Unmodified _EAISDAALEATENEPLNK_ 0 0 0 Q14966;D6W5H1;A8K583;B4E187 Q14966 Q14966 ZNF638 Zinc finger protein 638 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 962.4773 2 957.968184 1913.92182 62722.96 0.30023 0.00028761 0.43746 0.00041907 0.73769 0.00070668 957.968512942109 961.975606301303 98.137 0.40212 98.137 97.924 98.326 7.6294E-06 94 23 5 0 0 0 0.013278 1 54535 26.541 21.225 1 0.93709 0.73506 0 2062800 971860 1090900 6678 1746 2527 2594 10419 10419 EAISDSLLR 9 0 1 Unmodified _EAISDSLLR_ 0 0 0 B4DIS6;Q9H6R0;I3L1L6 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.2744 2 502.274564 1002.53457 87577.62 0.23279 0.00011692 0.2966 0.00014898 0.52939 0.0002659 502.274658605949 507.27872809998 69.531 0.78831 69.531 69.108 69.897 0 273 66 6 0 0 0 0.0042933 2 40354 69.628 48.929 1 1.5683 1.6361 0 13316000 5364900 7951400 6679 983 2528 2595 10420;10421 10421 EAISDSLLR 9 0 1 Unmodified _EAISDSLLR_ 0 0 0 B4DIS6;Q9H6R0;I3L1L6 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.2788 2 502.274564 1002.53457 88328.9 0.4145 0.00020819 0.17879 8.9802E-05 0.59329 0.000298 502.274565801277 507.278613024907 68.424 0.70071 68.424 67.981 68.681 0 159 56 4 0 0 0 0.0021086 3 40554 76.679 51.756 1 1.546 1.5524 0 19112000 8365100 10747000 6680 983 2528 2595 10422;10423;10424 10424 EAISDSLLR 9 0 1 Unmodified _EAISDSLLR_ 0 0 0 B4DIS6;Q9H6R0;I3L1L6 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.2747 2 502.274564 1002.53457 87915.73 0.29717 0.00014926 0.14682 7.3744E-05 0.44399 0.000223 502.274628943795 507.278624806365 79.273 0.81664 79.273 78.9 79.717 -7.6294E-06 178 48 6 0 0 0 0.034146 1 42708 44.377 36.81 1 1.3882 1.204 0 2460900 937710 1523100 6681 983 2528 2595 10425 10425 EAISDSLLR 9 0 1 Unmodified _EAISDSLLR_ 0 0 0 B4DIS6;Q9H6R0;I3L1L6 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 502.2743 2 502.274564 1002.53457 88221.4 0.1661 8.3429E-05 0.27312 0.00013718 0.43922 0.00022061 502.274720294064 507.278656546581 79.539 0.81705 79.539 79.167 79.984 0 151 49 4 0 0 0 0.034216 1 42032 44.349 32.58 1 1.476 1.3205 0 2302900 926090 1376800 6682 983 2528 2595 10426 10426 EAITHLLGVALTR 13 0 1 Unmodified _EAITHLLGVALTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.277 3 465.276909 1392.8089 88237.55 0.38076 0.00017716 -0.14917 -6.9404E-05 0.23159 0.00010776 465.276724846644 468.612897392994 104.91 1.8248 104.91 103.97 105.79 0 746 147 8 0 0 0 0.0020921 5 64845 45.79 45.79 1 0.89372 0.97968 0 53303000 29000000 24302000 6683 908 2529 2596 10427;10428;10429;10430;10431 10429 EAITHLLGVALTR 13 0 1 Unmodified _EAITHLLGVALTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.4119 2 697.411726 1392.8089 NaN NaN NaN -0.10585 -7.3818E-05 NaN NaN NaN NaN 105.07 1.5522 105.07 104.13 105.69 0 0 0 0 0.052271 1 65201 43.306 43.306 1 NaN NaN 0 12707000 12707000 0 6684 908 2529 2596 10432 10432 EAITHLLGVALTR 13 0 1 Unmodified _EAITHLLGVALTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2766 3 465.276909 1392.8089 88171.03 0.40506 0.00018847 -0.17733 -8.2506E-05 0.22773 0.00010596 465.276813764535 468.61288372275 102.81 1.7342 102.81 102.38 104.12 7.6294E-06 716 143 8 0 0 0 6.1159E-05 4 65325 70.563 70.563 1 0.86342 0.98395 0 135070000 70064000 65006000 6685 908 2529 2596 10433;10434;10435;10436 10435 EAITHLLGVALTR 13 0 1 Unmodified _EAITHLLGVALTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.4125 2 697.411726 1392.8089 72715.91 0.8597 0.00059957 0.20266 0.00014134 1.0624 0.0007409 697.411749825276 702.415881954918 102.98 1.2173 102.98 102.43 103.64 7.6294E-06 307 97 4 0 0 0 0.033028 1 64846 47.154 47.154 1 0.86657 0.97954 0 47443000 26312000 21131000 6686 908 2529 2596 10437 10437 EAITHLLGVALTR 13 0 1 Unmodified _EAITHLLGVALTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 465.2772 3 465.276909 1392.8089 87729.35 0.55621 0.00025879 -0.22667 -0.00010546 0.32954 0.00015333 465.276842592859 468.612866332991 114.68 0.78774 114.68 114.35 115.14 0 217 36 10 0 0 0 0.024074 2 66904 23.956 23.956 1 1.4686 1.2673 0 82509000 33532000 48978000 6687 908 2529 2596 10438;10439 10439 EAITHLLGVALTR 13 0 1 Unmodified _EAITHLLGVALTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.9185 2 697.411726 1392.8089 73493.64 0.82091 0.00057251 0.33094 0.0002308 1.1519 0.00080331 697.411832343486 702.415883929513 114.68 0.63716 114.68 114.4 115.04 0 137 29 8 0 0 0 0.00012078 2 66935 112.64 112.64 1 1.6793 1.4276 0 34354000 14291000 20063000 6688 908 2529 2596 10440;10441 10440 EAITHLLGVALTR 13 0 1 Unmodified _EAITHLLGVALTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 465.277 3 465.276909 1392.8089 87332.88 0.36139 0.00016815 -0.03219 -1.4977E-05 0.3292 0.00015317 465.276943613433 468.612906542691 114.45 0.82636 114.45 114.1 114.93 -7.6294E-06 183 35 9 0 0 0 4.0557E-05 2 65787 79.875 79.875 1 1.4544 1.2688 0 47430000 20683000 26748000 6689 908 2529 2596 10442;10443 10443 EAITHLLGVALTR 13 0 1 Unmodified _EAITHLLGVALTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 697.4133 2 697.411726 1392.8089 73794.73 0.65965 0.00046005 0.26365 0.00018387 0.9233 0.00064392 697.411844305075 702.416015510027 114.45 0.65869 114.45 114.15 114.81 0 134 27 7 0 0 0 0.00026967 2 65824 80.979 80.979 1 1.9278 1.657 0 21651000 9377300 12273000 6690 908 2529 2596 10444;10445 10445 EAIVAALLTR 10 0 1 Unmodified _EAIVAALLTR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.8281 2 528.824224 1055.63389 83591.72 0.57021 0.00030154 0.059786 3.1616E-05 0.62999 0.00033316 528.824139906414 533.828314517934 104.69 1.0819 104.69 104.17 105.25 7.6294E-06 427 88 7 0 0 0 0.00069328 2 64469 82.749 57.855 1 0.83023 0.91972 0 63650000 35372000 28279000 6691 899;1099 2530 2597 10446;10447 10447 EAIVAALLTR 10 0 1 Unmodified _EAIVAALLTR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.8282 2 528.824224 1055.63389 83441.94 0.24963 0.00013201 0.0951 5.0291E-05 0.34473 0.0001823 528.824198756627 533.828333575906 103.77 1.1155 103.77 103.34 104.46 0 481 93 8 0 0 0 0.00060252 2 65435 84.213 62.692 1 0.80288 0.9214 0 80211000 44597000 35614000 6692 899;1099 2530 2597 10448;10449 10448 EAIVAALLTR 10 0 1 Unmodified _EAIVAALLTR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 528.8252 2 528.824224 1055.63389 83060.31 0.70748 0.00037413 0.042187 2.2309E-05 0.74967 0.00039644 528.824161703576 533.828281617569 116.29 0.71255 116.29 116.03 116.74 7.6294E-06 151 33 7 0 0 0 0.023048 1 67293 45.598 31.391 1 1.027 0.85009 0 14860000 6742500 8117700 6693 899;1099 2530 2597 10450 10450 EAIVTSEELGQDLEHVEVLQK 21 1 0 Unmodified _EAIVTSEELGQDLEHVEVLQK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.4114 3 789.407705 2365.20129 NaN NaN NaN 0.62121 0.00049039 NaN NaN NaN NaN 109.56 0.39398 109.56 109.36 109.76 7.6294E-06 0 0 0 0.0062687 1 68524 30.969 22.782 1 NaN NaN 0 10925000 0 10925000 6694 523 2531 2598 10451 10451 EAIVTSEELGQDLEHVEVLQK 21 1 0 Unmodified _EAIVTSEELGQDLEHVEVLQK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.4138 3 789.407705 2365.20129 69282.87 0.93453 0.00073772 -0.069764 -5.5073E-05 0.86476 0.00068265 789.741670090976 792.413017448918 109.01 0.37259 109.01 108.79 109.16 0 109 28 6 0 0 0 1.1617E-09 2 69832 85.855 85.855 1 1.3888 1.435 0 18453000 8087400 10366000 6695 523 2531 2598 10452;10453 10452 EAIVTSEELGQDLEHVEVLQK 21 1 0 Unmodified _EAIVTSEELGQDLEHVEVLQK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.4129 3 789.407705 2365.20129 69042.52 0.90402 0.00071364 0.0099523 7.8564E-06 0.91398 0.0007215 789.407766704927 792.413526713982 120.58 0.42296 120.58 120.35 120.78 0 59 23 5 0 0 0 7.9208E-09 2 70645 76.492 76.492 1 8.7883 7.2399 0 10649000 741320 9907600 6696 523 2531 2598 10454;10455 10454 EAIYNDVLTK 10 1 0 Unmodified _EAIYNDVLTK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.3087 2 583.308603 1164.60265 80716.28 0.43767 0.0002553 0.59252 0.00034562 1.0302 0.00060092 583.308870263939 587.316114585499 68.974 0.59062 68.974 68.603 69.194 0 170 51 4 0 0 0 0.00021283 1 39983 93.649 75.74 1 0.77319 0.75765 0 21321000 12003000 9318000 6697 672 2532 2599 10456 10456 EAIYNDVLTK 10 1 0 Unmodified _EAIYNDVLTK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.3098 2 583.308603 1164.60265 80367.36 0.50818 0.00029643 0.51865 0.00030253 1.0268 0.00059896 583.308816181261 587.316020165731 67.779 0.51836 67.779 67.449 67.968 0 190 44 6 0 0 0 1.2687E-08 2 40170 123.35 84.392 1 0.80745 0.81657 0 26696000 15755000 10941000 6698 672 2532 2599 10457;10458 10458 EAIYNDVLTK 10 1 0 Unmodified _EAIYNDVLTK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.3168 2 583.308603 1164.60265 78223.34 0.44287 0.00025833 0.34687 0.00020233 0.78974 0.00046066 583.308763690632 587.31596001232 78.964 0.64082 78.964 78.666 79.307 0 177 40 6 0 0 0 0.0018846 2 41613 71.614 61.383 1 1.1609 0.91034 0 3794400 1553900 2240500 6699 672 2532 2599 10459;10460 10459 EAKPDELMDSK 11 2 0 Oxidation (M) _EAKPDELM(ox)DSK_ EAKPDELM(1)DSK EAKPDELM(121.6)DSK 0 1 1 A8KA83;Q9P0L0 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8121 2 639.797743 1277.58093 73736.62 0.42256 0.00027035 -0.87249 -0.00055822 -0.44994 -0.00028787 639.796484726786 647.811908924161 17.382 0.35103 17.382 17.266 17.617 0 55 13 7 0 0 0 2.0359E-08 1 4602 121.6 7.2022 1 1.2654 1.4793 0 12559000 5861700 6696900 6700 791 2533 2600 10461 10461 635 EALAFIIR 8 0 1 Unmodified _EALAFIIR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7811 2 466.781828 931.549102 87781.31 0.19602 9.1498E-05 -0.085599 -3.9956E-05 0.11042 5.1542E-05 466.781738029322 471.785773821311 99.6 1.0526 99.6 99.16 100.21 0 439 88 7 0 0 0 0.0062085 3 61300 88.029 28.803 1 0.93666 1.0736 0 133950000 66528000 67419000 6701 886 2534 2601 10462;10463;10464 10464 EALAFIIR 8 0 1 Unmodified _EALAFIIR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7818 2 466.781828 931.549102 87655.28 0.46663 0.00021782 -0.029552 -1.3794E-05 0.43708 0.00020402 466.781768775946 471.785817142899 98.744 1.0477 98.744 98.223 99.271 0 411 89 7 0 0 0 0.003222 4 61504 97.473 37.179 1 0.94748 1.0793 0 132760000 69917000 62845000 6702 886 2534 2601 10465;10466;10467;10468 10465 EALAFIIR 8 0 1 Unmodified _EALAFIIR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.7856 2 466.781828 931.549102 87353.84 0.57781 0.00026971 -0.21276 -9.9313E-05 0.36505 0.0001704 466.781655892327 471.78571862595 112.15 0.77186 112.15 111.87 112.64 7.6294E-06 227 45 8 0 0 0 0.0082133 2 64971 79.597 30.007 1 1.1933 0.97592 0 16126000 7504000 8621800 6703 886 2534 2601 10469;10470 10469 EALAFIIR 8 0 1 Unmodified _EALAFIIR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.7854 2 466.781828 931.549102 87778.06 0.32664 0.00015247 -0.031231 -1.4578E-05 0.29541 0.00013789 466.781773468492 471.785792921108 111.93 0.80363 111.93 111.64 112.44 0 196 44 7 0 0 0 0.0071364 2 63895 84.244 30.331 1 1.1123 0.91902 0 14608000 7001900 7606400 6704 886 2534 2601 10471;10472 10472 EALALQGSLEFDDAGGEGVTSHVDDEYR 28 0 1 Unmodified _EALALQGSLEFDDAGGEGVTSHVDDEYR_ 0 0 0 H0Y714;Q96G21;B8ZZ47 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 997.7917 3 994.119611 2979.337 62003.2 0.52621 0.00052312 0.27504 0.00027342 0.80125 0.00079654 994.119047595124 998.126423690467 102.17 0.73528 102.17 101.82 102.55 0 296 55 9 0 0 0 2.3769E-07 3 64289 47.331 47.331 1 1.2501 1.3572 0 28154000 17482000 10671000 6705 1286 2535 2602 10473;10474;10475 10475 EALALQGSLEFDDAGGEGVTSHVDDEYR 28 0 1 Unmodified _EALALQGSLEFDDAGGEGVTSHVDDEYR_ 0 0 0 H0Y714;Q96G21;B8ZZ47 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 994.4528 3 994.119611 2979.337 60148.57 0.67473 0.00067076 0.068487 6.8084E-05 0.74321 0.00073884 994.4538654273 997.789983028346 114.1 0.65315 114.1 113.86 114.51 -7.6294E-06 183 27 11 0 0 0 9.8863E-28 2 66594 104.3 104.3 1 1.258 1.0288 0 13641000 5907400 7734000 6706 1286 2535 2602 10476;10477 10476 EALCGCTVNVPTLDGR 16 0 1 Unmodified _EALCGCTVNVPTLDGR_ 0 0 0 Q6FI51;Q6FHS4;P25685;M0R080 Q6FI51 Q6FI51 DNAJB1 DnaJ homolog subfamily B member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.424 2 881.416553 1760.81855 NaN NaN NaN 0.29574 0.00026067 NaN NaN NaN NaN 92.734 0.25221 92.734 92.569 92.821 0 0 0 0 0.049605 1 57409 34.685 0.99944 1 NaN NaN 0 5190200 0 5190200 6707 1517 2536 2603 10478 10478 EALCGCTVNVPTLDGR 16 0 1 Unmodified _EALCGCTVNVPTLDGR_ 0 0 0 Q6FI51;Q6FHS4;P25685;M0R080 Q6FI51 Q6FI51 DNAJB1 DnaJ homolog subfamily B member 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.4158 2 881.416553 1760.81855 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.787 1 86.787 86.287 87.287 0 0 0 0 0.04203 1 53500 39.73 6.1415 1 6708 1517 2536 2603 10479 10479 EALDIHAVDGTTEESSSLQASTTNDSGYR 29 0 1 Unmodified _EALDIHAVDGTTEESSSLQASTTNDSGYR_ 0 0 0 B9EGR5;Q8IWI9;H3BP52;H3BTF4;Q9H6M4 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1022.8035 3 1018.7972 3053.36976 61224.41 0.56987 0.00058058 0.30136 0.00030703 0.87123 0.00088761 1019.13095009077 1022.80250461712 90.904 0.37953 90.904 90.732 91.112 -7.6294E-06 104 22 7 0 0 0 0.011402 1 50448 20.455 20.455 1 1.8233 1.5244 0 3632100 1054900 2577200 6709 1121 2537 2604 10480 10480 EALDVLGAVLK 11 1 0 Unmodified _EALDVLGAVLK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.3377 2 564.337164 1126.65977 82601.16 0.71607 0.00040411 -0.15845 -8.9421E-05 0.55762 0.00031469 564.337075556591 568.344065035269 117.35 0.53184 117.35 117.14 117.67 7.6294E-06 157 38 6 0 0 0 0.00032567 2 75032 87.308 44.709 1 1.6629 1.6934 0 14195000 4725100 9469900 6710 305 2538 2605 10481;10482 10482 EALDVLGAVLK 11 1 0 Unmodified _EALDVLGAVLK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.3448 2 564.337164 1126.65977 82340.8 0.71167 0.00040162 -0.013187 -7.4419E-06 0.69849 0.00039418 564.337079531004 568.344215667931 116.87 0.61108 116.87 116.61 117.22 7.6294E-06 143 37 6 0 0 0 2.7317E-05 2 76484 102.07 56.387 1 1.5821 1.6089 0 12568000 4832100 7735800 6711 305 2538 2605 10483;10484 10483 EALDVLGAVLK 11 1 0 Unmodified _EALDVLGAVLK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.3448 2 564.337164 1126.65977 82028.09 0.75602 0.00042665 -0.36587 -0.00020647 0.39015 0.00022018 564.336779218866 568.344023263922 129.25 0.4489 129.25 129.04 129.49 0 63 20 4 0 0 0 0.031169 1 78099 38.303 23.637 1 1.1507 0.96129 0 1672200 758850 913350 6712 305 2538 2605 10485 10485 EALDVLGAVLK 11 1 0 Unmodified _EALDVLGAVLK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.8466 2 564.337164 1126.65977 83439.81 0.86055 0.00048564 -0.17473 -9.8607E-05 0.68582 0.00038704 564.336928471346 568.34404840324 128.99 0.35966 128.99 128.86 129.22 0 43 14 5 0 0 0 0.013755 1 77085 47.187 28.747 1 1.5703 1.3 0 1656300 634870 1021400 6713 305 2538 2605 10486 10486 EALEALVPVTIEVEVPFDLHR 21 0 1 Unmodified _EALEALVPVTIEVEVPFDLHR_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H0Y394;Q6ZS03;Q96CF6;Q2HJC8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.4348 3 792.765164 2375.27366 69098.34 0.11864 9.4057E-05 -0.68419 -0.0005424 -0.56555 -0.00044835 793.09821698761 796.435065982581 133.32 0.25153 133.32 133.19 133.44 0 18 6 5 0 0 0 0.0014351 1 89560 27.61 27.61 1 2.8516 3.0878 0 27364000 8771600 18592000 6714 154 2539 2606 10487 10487 EALELTDTGLLSGSEER 17 0 1 Unmodified _EALELTDTGLLSGSEER_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 915.4521 2 910.449627 1818.8847 63005.79 0.36259 0.00033012 0.33676 0.0003066 0.69936 0.00063673 910.448465921405 915.453137992445 102.47 0.54152 102.47 102.17 102.71 0 141 44 7 0 0 0 3.7023E-07 1 62929 96.734 96.734 1 1.8641 1.8839 0 9639800 4222700 5417100 6715 1729 2540 2607 10488 10488 EALENANTNTEVLK 14 1 0 Unmodified _EALENANTNTEVLK_ 0 0 0 Q9H444 Q9H444 Q9H444 CHMP4B Charged multivesicular body protein 4b MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.8998 2 773.391384 1544.76822 72292.8 0.52849 0.00040873 1.0005 0.00077377 1.529 0.0011825 773.391692955921 777.900085347717 52.723 0.29572 52.723 52.529 52.824 0 56 21 4 0 0 0 0.0049382 2 29387 44.612 31.843 1 1.3841 1.3883 0 7559200 2600700 4958600 6716 2030 2541 2608 10489;10490 10490 EALENCITLQDFNR 14 0 1 Unmodified _EALENCITLQDFNR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 866.9158 2 861.909418 1721.80428 65345.06 0.83126 0.00071647 -0.25638 -0.00022098 0.57488 0.00049549 861.90929583565 866.913528385371 94.486 0.67426 94.486 94.165 94.84 0 352 61 8 0 0 0 1.9271E-37 4 57360 163.84 134.8 1 0.73803 0.81591 0 58089000 31965000 26124000 6717 1995;1289 2542 2609 10491;10492;10493;10494 10493 EALENCITLQDFNR 14 0 1 Unmodified _EALENCITLQDFNR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.9143 2 861.909418 1721.80428 65314.4 0.61595 0.00053089 -0.10708 -9.2294E-05 0.50887 0.0004386 861.909275078641 866.913477964615 93.769 0.6638 93.769 93.456 94.12 0 355 58 8 0 0 0 1.4392E-37 3 58152 166.87 129.18 1 0.77738 0.88569 0 104050000 60625000 43430000 6718 1995;1289 2542 2609 10495;10496;10497 10497 EALENCITLQDFNR 14 0 1 Unmodified _EALENCITLQDFNR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 861.9102 2 861.909418 1721.80428 64668.84 0.62719 0.00054058 -0.25508 -0.00021986 0.3721 0.00032072 861.909502395206 866.913495017198 107.77 0.92294 107.77 107.51 108.44 -7.6294E-06 291 48 11 0 0 0 5.0002E-21 2 61759 141.89 141.89 1 1.6191 1.3937 0 55049000 21159000 33890000 6719 1995;1289 2542 2609 10498;10499 10499 EALENCITLQDFNR 14 0 1 Unmodified _EALENCITLQDFNR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 861.9105 2 861.909418 1721.80428 64575.79 0.45168 0.00038931 -0.24761 -0.00021342 0.20407 0.00017589 861.909428622813 866.913466277359 107.8 0.85019 107.8 107.44 108.29 7.6294E-06 300 46 11 0 0 0 8.4155E-05 3 60800 87.878 81.437 1 1.6326 1.4243 0 47112000 18785000 28327000 6720 1995;1289 2542 2609 10500;10501;10502 10501 EALEVAVAGTELFR 14 0 1 Unmodified _EALEVAVAGTELFR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.9043 2 752.903931 1503.79331 69875.61 0.6541 0.00049247 -0.18657 -0.00014047 0.46752 0.000352 752.9039044041 757.907905768117 114.69 0.68803 114.69 114.44 115.13 -7.6294E-06 226 45 7 0 0 0 9.2129E-15 2 72690 134.98 134.98 1 0.86966 0.92161 0 41590000 20849000 20741000 6721 925 2543 2610 10503;10504 10503 EALEVAVAGTELFR 14 0 1 Unmodified _EALEVAVAGTELFR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.9079 2 752.903931 1503.79331 69729.51 0.71916 0.00054146 -0.32319 -0.00024333 0.39597 0.00029813 752.903938767776 757.907973381387 114.18 0.735 114.18 113.88 114.61 7.6294E-06 249 51 7 0 0 0 5.3108E-30 2 74099 159.94 159.94 1 0.93199 1.0512 0 46864000 24202000 22662000 6722 925 2543 2610 10505;10506 10506 EALEVAVAGTELFR 14 0 1 Unmodified _EALEVAVAGTELFR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 758.4092 2 752.903931 1503.79331 70063.2 1.0528 0.00079268 0.16424 0.00012366 1.2171 0.00091634 753.407999558099 757.907825542545 126.1 0.65478 126.1 125.82 126.47 7.6294E-06 140 26 8 0 0 0 0.00012135 2 75726 81.625 68.505 1 1.3049 1.0904 0 23847000 9251000 14596000 6723 925 2543 2610 10507;10508 10507 EALEVAVAGTELFR 14 0 1 Unmodified _EALEVAVAGTELFR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 752.9047 2 752.903931 1503.79331 69545.81 0.65268 0.0004914 0.73801 0.00055565 1.3907 0.0010471 752.904158893598 757.908087358989 125.89 0.70492 125.89 125.64 126.34 0 146 32 7 0 0 0 0.00018773 2 74817 71.085 65.544 1 1.3755 1.1252 0 13227000 5413800 7813200 6724 925 2543 2610 10509;10510 10510 EALEYQR 7 0 1 Unmodified _EALEYQR_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q59G16 Q59G16 SMARCC2 SWI/SNF complex subunit SMARCC2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.7269 2 454.727249 907.439946 NaN NaN NaN -0.086899 -3.9515E-05 NaN NaN NaN NaN 25.06 0.29821 25.06 24.916 25.214 -1.9073E-06 0 0 0 0.031576 1 10707 71.715 6.0427 1 NaN NaN 0 5665900 5665900 0 6725 321 2544 2611 10511 10511 EALGGQALYPHVLVK 15 1 0 Unmodified _EALGGQALYPHVLVK_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0;M0QYZ0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.6378 3 532.303236 1593.88788 85275.27 0.72207 0.00038436 -0.0093765 -4.9911E-06 0.7127 0.00037937 532.303180688691 534.974503546735 84.753 0.68935 84.753 84.37 85.059 0 182 57 6 0 0 0 0.0060332 2 50818 31.389 29.981 1 0.94022 0.92309 0 20372000 9926100 10446000 6726 49 2545 2612 10512;10513 10513 EALGGQALYPHVLVK 15 1 0 Unmodified _EALGGQALYPHVLVK_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0;M0QYZ0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.303 3 532.303236 1593.88788 86928.16 0.47687 0.00025384 0.37841 0.00020143 0.85528 0.00045527 532.303194597609 534.975007711659 83.137 0.60701 83.137 82.936 83.543 0 174 44 7 0 0 0 0.0014779 2 50881 38.199 33.808 1 0.99524 1.037 0 19093000 11513000 7580000 6727 49 2545 2612 10514;10515 10515 EALGGQALYPHVLVK 15 1 0 Unmodified _EALGGQALYPHVLVK_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0;M0QYZ0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.3035 3 532.303236 1593.88788 84658.71 0.32595 0.0001735 -0.002709 -1.442E-06 0.32324 0.00017206 532.303229046218 534.974660899058 96.083 0.45974 96.083 95.884 96.344 -7.6294E-06 125 29 7 0 0 0 0.040694 1 53060 18.364 15.802 1 1.151 0.92175 0 3054200 1336700 1717400 6728 49 2545 2612 10516 10516 EALGIPAAASFK 12 1 0 Unmodified _EALGIPAAASFK_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.8344 2 587.826963 1173.63937 NaN NaN NaN -0.34389 -0.00020215 NaN NaN NaN NaN 90.086 0.27305 90.086 89.928 90.201 0 0 0 0 0.0021749 1 54426 69.65 42.649 1 NaN NaN 0 8258200 0 8258200 6729 852 2546 2613 10517 10517 EALGIPAAASFK 12 1 0 Unmodified _EALGIPAAASFK_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.8285 2 587.826963 1173.63937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.154 1 90.154 89.654 90.654 0 0 0 0 0.038234 1 54452 43.958 23.258 1 6730 852 2546 2613 10518 10518 EALGIPAAASFK 12 1 0 Unmodified _EALGIPAAASFK_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.8342 2 587.826963 1173.63937 80745.28 0.67032 0.00039403 -0.23665 -0.00013911 0.43367 0.00025492 587.827097104144 591.833281331868 89.143 0.35822 89.143 88.949 89.308 0 83 29 5 0 0 0 0.0023961 2 55008 58.699 58.699 1 2.5046 2.6383 0 19837000 6857500 12980000 6731 852 2546 2613 10519;10520 10519 EALGLGPPAAQLTPPPAPVGLR 22 0 1 Unmodified _EALGLGPPAAQLTPPPAPVGLR_ 0 0 0 A0A087WZ13;E9PAU2;Q8IY67 A0A087WZ13 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1067.1106 2 1061.60459 2121.19462 61718.29 0.52262 0.00055482 -0.12832 -0.00013623 0.3943 0.00041859 1062.10597864099 1066.60796765154 116.74 0.21299 116.74 116.67 116.88 0 42 12 6 0 0 0 0.023189 1 76449 22.606 22.606 1 1.8306 1.8669 0 5210400 1849900 3360400 6732 438 2547 2614 10521 10521 EALIAASETLK 11 1 0 Unmodified _EALIAASETLK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.326 2 573.324254 1144.63395 79788.91 0.72931 0.00041813 0.30946 0.00017742 1.0388 0.00059555 573.324839434998 577.330626950859 70.655 1.5291 70.655 69.723 71.252 0 549 130 10 0 0 0 6.9031E-08 1 41042 114.4 87.708 1 0.87056 1.0324 0 491770000 268290000 223470000 6733 2070 2548 2615 10522 10522 EALIAASETLK 11 1 0 Unmodified _EALIAASETLK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.3261 2 573.324254 1144.63395 79352.88 0.53753 0.00030818 -0.050019 -2.8677E-05 0.48751 0.0002795 573.324793379989 577.330454987816 69.378 0.72887 69.378 69.091 69.819 0 376 61 10 0 0 0 3.2449E-10 2 41208 132.88 108.1 1 0.82337 0.97037 0 611910000 334370000 277540000 6734 2070 2548 2615 10523;10524 10523 EALLELLR 8 0 1 Unmodified _EALLELLR_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.7925 2 478.792392 955.570232 88352.15 0.15158 7.2577E-05 0.33356 0.00015971 0.48515 0.00023228 478.792452022933 483.796588555649 110.03 0.78844 110.03 109.56 110.35 0 255 56 6 0 0 0 0.001007 2 68859 117.18 78.939 1 1.1335 1.2224 0 48121000 22019000 26102000 6735 1724 2549 2616 10525;10526 10526 EALLELLR 8 0 1 Unmodified _EALLELLR_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.7925 2 478.792392 955.570232 88147.96 0.29344 0.0001405 0.11486 5.4996E-05 0.40831 0.0001955 478.792377144309 483.796431219748 109.21 0.89863 109.21 108.88 109.78 0 218 62 5 0 0 0 1.5387E-05 2 69933 143.85 99.132 1 1.1076 1.2095 0 30070000 13791000 16279000 6736 1724 2549 2616 10527;10528 10528 EALLELLR 8 0 1 Unmodified _EALLELLR_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.7923 2 478.792392 955.570232 87399.05 0.44894 0.00021495 0.23458 0.00011232 0.68352 0.00032726 478.792410608982 483.796560542531 121.16 0.61507 121.16 120.87 121.48 7.6294E-06 106 27 6 0 0 0 0.013893 1 72018 64.265 41.222 1 1.0145 0.87214 0 6662600 3309900 3352700 6737 1724 2549 2616 10529 10529 EALLELLR 8 0 1 Unmodified _EALLELLR_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.7969 2 478.792392 955.570232 87269.48 0.49354 0.0002363 0.010371 4.9658E-06 0.50391 0.00024127 478.792285627731 483.796446670966 121 0.61398 121 120.69 121.31 7.6294E-06 115 27 6 0 0 0 0.012634 2 70889 67.169 34.458 1 0.98178 0.81718 0 7192900 4002900 3190000 6738 1724 2549 2616 10530;10531 10530 EALLGVQEDVDEYVK 15 1 0 Unmodified _EALLGVQEDVDEYVK_ 0 0 0 Q14257;H0YL43 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.9291 2 853.9278 1705.84105 65766.73 0.77865 0.00066491 -0.017095 -1.4598E-05 0.76156 0.00065031 853.927668610573 857.935160691241 105.1 0.75069 105.1 104.79 105.54 0 264 59 6 0 0 0 2.1296E-10 2 64938 119.76 119.76 1 1.5708 1.569 0 26505000 10171000 16334000 6739 1730 2550 2617 10532;10533 10533 EALLGVQEDVDEYVK 15 1 0 Unmodified _EALLGVQEDVDEYVK_ 0 0 0 Q14257;H0YL43 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 854.4314 2 853.9278 1705.84105 65332.94 0.46685 0.00039866 0.88096 0.00075228 1.3478 0.0011509 853.928225555212 857.935113720193 116.74 0.54528 116.74 116.45 117 0 123 21 11 0 0 0 0.00014922 2 68602 79.492 79.492 1 1.5787 1.2357 0 16466000 7610700 8855200 6740 1730 2550 2617 10534;10535 10534 EALLGVQEDVDEYVK 15 1 0 Unmodified _EALLGVQEDVDEYVK_ 0 0 0 Q14257;H0YL43 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 857.9349 2 853.9278 1705.84105 65147.82 0.8032 0.00068587 -0.22223 -0.00018977 0.58097 0.00049611 853.927596732308 857.934758767082 116.62 0.57191 116.62 116.32 116.89 0 99 25 7 0 0 0 0.00024347 2 67597 76.165 76.165 1 1.6908 1.3879 0 9189700 3911800 5277900 6741 1730 2550 2617 10536;10537 10536 EALLSSAVDHGSDEVK 16 1 0 Unmodified _EALLSSAVDHGSDEVK_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.9134 2 828.907399 1655.80024 NaN NaN NaN 0.1378 0.00011423 NaN NaN NaN NaN 56.467 0.51041 56.467 56.263 56.773 3.8147E-06 0 0 0 0.010855 1 31933 47.189 29.753 1 NaN NaN 0 7794500 0 7794500 6742 1255 2551 2618 10538 10538 EALLSSAVDHGSDEVK 16 1 0 Unmodified _EALLSSAVDHGSDEVK_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.9147 2 828.907399 1655.80024 68323.23 0.56911 0.00047174 0.082501 6.8386E-05 0.65161 0.00054012 829.408987937706 832.914502806076 66.335 0.41842 66.335 66.136 66.554 0 103 28 5 0 0 0 0.047031 1 33565 23.092 23.092 1 3.2937 2.7287 0 1725600 468590 1257000 6743 1255 2551 2618 10539 10539 EALNSLSQLSYSTSSSK 17 1 0 Unmodified _EALNSLSQLSYSTSSSK_ 0 0 0 Q9P0K7;B3KMZ9 Q9P0K7 Q9P0K7 RAI14 Ankycorbin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.4506 2 901.444345 1800.87414 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.668 1 78.668 78.168 79.168 0 0 0 0 0.017034 1 47728 43.382 36.494 1 6744 2093 2552 2619 10540 10540 EALNVFGNDYDTEDGTGVR 19 0 1 Unmodified _EALNVFGNDYDTEDGTGVR_ 0 0 0 Q5QPP9;Q5QPP3;Q5QPP4;A0A024RAB7;Q14376 Q5QPP9 Q5QPP9 GALE UDP-glucose 4-epimerase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1041.4677 2 1036.4638 2070.91304 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.183 1 92.183 91.683 92.683 0 0 0 0 8.115E-05 1 55858 67.234 58.93 1 6745 299 2553 2620 10541 10541 EALNVFGNDYDTEDGTGVR 19 0 1 Unmodified _EALNVFGNDYDTEDGTGVR_ 0 0 0 Q5QPP9;Q5QPP3;Q5QPP4;A0A024RAB7;Q14376 Q5QPP9 Q5QPP9 GALE UDP-glucose 4-epimerase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1041.4684 2 1036.4638 2070.91304 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.397 1 91.397 90.897 91.897 7.6294E-06 0 0 0 0.048858 1 56572 34.515 29.022 1 6746 299 2553 2620 10542 10542 EALNVFGNDYDTEDGTGVR 19 0 1 Unmodified _EALNVFGNDYDTEDGTGVR_ 0 0 0 Q5QPP9;Q5QPP3;Q5QPP4;A0A024RAB7;Q14376 Q5QPP9 Q5QPP9 GALE UDP-glucose 4-epimerase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1041.4664 2 1036.4638 2070.91304 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.469 1 91.469 90.969 91.969 0 0 0 0 0.00033043 1 56619 57.328 50.198 1 6747 299 2553 2620 10543 10543 EALNVINTHTK 11 1 0 Unmodified _EALNVINTHTK_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;R4GNC1 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.2914 2 620.338227 1238.6619 78873.2 0.75154 0.00046621 -0.014542 -9.021E-06 0.737 0.00045719 620.338248424803 624.846983672876 37.193 0.34282 37.193 36.993 37.336 0 91 29 4 0 0 0 0.024466 1 18862 72.243 72.243 1 1.1271 1.1417 0 18234000 8837900 9396000 6748 1416 2554 2621 10544 10544 EALNVINTHTK 11 1 0 Unmodified _EALNVINTHTK_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;R4GNC1 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.3465 2 620.338227 1238.6619 76926.95 0.48812 0.0003028 0.12808 7.9453E-05 0.6162 0.00038225 620.338137404473 624.34549110827 35.933 0.45609 35.933 35.748 36.204 0 109 35 4 0 0 0 1.9541E-12 3 18364 142 142 1 1.1357 1.209 0 20727000 10454000 10273000 6749 1416 2554 2621 10545;10546;10547 10546 EALPVSLPQIPCLSSFK 17 1 0 Unmodified _EALPVSLPQIPCLSSFK_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6;E9PJ60 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 948.0187 2 943.508237 1885.00192 67243.02 1.0931 0.0010313 0.61694 0.00058209 1.71 0.0016134 943.508500822717 948.017605052818 129.91 0.36218 129.91 129.67 130.03 -1.5259E-05 58 18 7 0 0 0 0.010144 2 84693 31.675 31.675 1 1.7273 1.7393 0 4925700 1721200 3204500 6750 1901 2555 2622 10548;10549 10549 EALPVSLPQIPCLSSFK 17 1 0 Unmodified _EALPVSLPQIPCLSSFK_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6;E9PJ60 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 944.0147 2 943.508237 1885.00192 66903.55 0.73185 0.00069051 1.1726 0.0011063 1.9044 0.0017968 943.509071290151 948.018107262474 129.55 0.35175 129.55 129.38 129.73 0 71 20 6 0 0 0 0.011461 2 86514 30.828 30.828 1 1.5728 1.5654 0 6290500 2385700 3904800 6751 1901 2555 2622 10550;10551 10550 EALQYFYFLR 10 0 1 Unmodified _EALQYFYFLR_ 0 0 0 Q8N1F7;A8K897;H3BVG0 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.3523 2 675.348063 1348.68157 76570.73 0.66617 0.0004499 0.39318 0.00026554 1.0594 0.00071544 675.849440479257 680.352385254031 118.87 0.47234 118.87 118.65 119.12 7.6294E-06 112 29 5 0 0 0 4.5577E-08 1 78273 116.73 57.745 1 1.9303 1.9351 0 11296000 4831400 6464600 6752 1904 2556 2623 10552 10552 EALSFPHLHLR 11 0 1 Unmodified _EALSFPHLHLR_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.9149 3 440.578811 1318.7146 91819.17 -0.0035052 -1.5443E-06 -0.18078 -7.9647E-05 -0.18428 -8.1191E-05 440.578735214837 443.914819946584 90.687 0.51446 90.687 90.436 90.95 0 90 27 5 0 0 0 0.057227 1 49507 18.19 18.19 1 2.049 1.849 0 2083000 760660 1322300 6753 1680 2557 2624 10553 10553 EALVDTLTGILSPVQEVR 18 0 1 Unmodified _EALVDTLTGILSPVQEVR_ 0 0 0 Q96P70 Q96P70 Q96P70 IPO9 Importin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.5429 2 970.53858 1939.06261 NaN NaN NaN -0.42742 -0.00041482 NaN NaN NaN NaN 130.78 0.3316 130.78 130.59 130.93 0 0 0 0 8.6826E-06 1 87507 68.809 56.449 1 NaN NaN 0 2479800 0 2479800 6754 1983 2558 2625 10554 10554 EAMEDGEIDGNK 12 1 0 Unmodified _EAMEDGEIDGNK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 654.2745 2 654.274632 1306.53471 76171.44 0.58898 0.00038536 -0.18785 -0.0001229 0.40114 0.00026245 654.274353084594 658.281711136119 30.864 0.38086 30.864 30.673 31.054 1.9073E-06 81 22 5 0 0 0 0.016404 2 12862 42.21 42.21 1 0.62646 0.527 0 1911400 1046800 864590 6755 151 2559 2626 10555;10556 10555 EAMEDGEIDGNK 12 1 0 Unmodified _EAMEDGEIDGNK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.2747 2 654.274632 1306.53471 75138.44 0.47903 0.00031342 -0.027532 -1.8013E-05 0.4515 0.0002954 654.274485548121 658.281911035442 31.041 0.37597 31.041 30.81 31.186 0 76 19 5 0 0 0 0.061068 1 12498 30.824 30.824 1 0.64424 0.55119 0 1416900 775430 641440 6756 151 2559 2626 10557 10557 EAMNDPLLER 10 0 1 Oxidation (M) _EAM(ox)NDPLLER_ EAM(1)NDPLLER EAM(64.3)NDPLLER 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.2911 2 602.287345 1202.56014 76657.33 0.80266 0.00048343 0.07563 4.5551E-05 0.87829 0.00052898 602.287500689159 607.29128278181 46.498 0.71207 46.498 46.084 46.796 -3.8147E-06 252 61 6 0 0 0 0.0016896 3 24986 64.297 50.975 1 1.7212 1.8716 0 50686000 19347000 31338000 6757 1379 2560 2627 10558;10559;10560 10560 1044 EAMNDPLLER 10 0 1 Oxidation (M) _EAM(ox)NDPLLER_ EAM(1)NDPLLER EAM(82.29)NDPLLER 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.2912 2 602.287345 1202.56014 76620.13 0.68946 0.00041526 0.46794 0.00028183 1.1574 0.00069709 602.287868272372 607.291411572411 45.596 0.67741 45.596 45.204 45.882 0 213 59 5 0 0 0 0.00034978 3 24887 82.287 55.903 1 1.6305 1.8963 0 62357000 23905000 38452000 6758 1379 2560 2627 10561;10562;10563 10562 1044 EAMVQAEEAAAEITR 15 0 1 Oxidation (M) _EAM(ox)VQAEEAAAEITR_ EAM(1)VQAEEAAAEITR EAM(216.68)VQAEEAAAEITR 0 1 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 817.8886 2 817.888152 1633.76175 65388.62 0.48203 0.00039425 0.32581 0.00026648 0.80784 0.00066072 817.888612466174 822.892506812587 67.206 0.61165 67.206 66.834 67.445 0 409 47 11 0 0 0 1.4884E-84 2 38772 216.68 185.19 1 1.0716 1.2351 0 151380000 74297000 77084000 6759 785 2561 2628 10564;10565 10564 618 EAMVQAEEAAAEITR 15 0 1 Oxidation (M) _EAM(ox)VQAEEAAAEITR_ EAM(1)VQAEEAAAEITR EAM(115.57)VQAEEAAAEITR 0 1 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 817.8892 2 817.888152 1633.76175 65672.73 0.77792 0.00063625 -0.08182 -6.6919E-05 0.6961 0.00056933 817.888272250535 822.892274341466 67.636 0.60128 67.636 67.423 68.024 0 344 50 10 0 0 0 1.8105E-10 2 39291 115.57 98.943 1 0.94612 1.0892 0 147430000 73241000 74192000 6760 785 2561 2628 10566;10567 10566 618 EAMVQAEEAAAEITR 15 0 1 Oxidation (M) _EAM(ox)VQAEEAAAEITR_ EAM(1)VQAEEAAAEITR EAM(172.76)VQAEEAAAEITR 0 1 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.8882 2 817.888152 1633.76175 65537.99 0.571 0.00046701 0.017254 1.4112E-05 0.58825 0.00048113 817.888232228266 822.892228699051 66.141 0.70081 66.141 65.726 66.427 0 458 56 11 0 0 0 3.2861E-39 2 39045 172.76 147.37 1 1.1231 1.2776 0 116830000 63898000 52928000 6761 785 2561 2628 10568;10569 10569 618 EAMVQAEEAAAEITR 15 0 1 Oxidation (M) _EAM(ox)VQAEEAAAEITR_ EAM(1)VQAEEAAAEITR EAM(158.42)VQAEEAAAEITR 0 1 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.8927 2 817.888152 1633.76175 65923.39 0.773 0.00063223 -0.28909 -0.00023644 0.48391 0.00039579 817.888160474323 822.89214579981 66.617 0.69201 66.617 66.298 66.99 0 364 57 9 0 0 0 5.1844E-31 2 39484 158.42 149.46 1 0.96178 1.0937 0 119730000 60854000 58871000 6762 785 2561 2628 10570;10571 10570 618 EAMVQAEEAAAEITR 15 0 1 Oxidation (M) _EAM(ox)VQAEEAAAEITR_ EAM(1)VQAEEAAAEITR EAM(73.47)VQAEEAAAEITR 0 1 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 822.8917 2 817.888152 1633.76175 66657.81 0.5549 0.00045384 0.011616 9.5009E-06 0.56651 0.00046335 817.888302573565 822.892413520678 77.727 0.53172 77.727 77.408 77.94 -7.6294E-06 280 36 10 0 0 0 0.00010962 2 41482 73.466 61.253 1 0.72094 0.59675 0 19837000 12037000 7799600 6763 785 2561 2628 10572;10573 10573 618 EAMVQAEEAAAEITR 15 0 1 Oxidation (M) _EAM(ox)VQAEEAAAEITR_ EAM(1)VQAEEAAAEITR EAM(130.1)VQAEEAAAEITR 0 1 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 822.8927 2 817.888152 1633.76175 66319.23 0.61179 0.00050037 -0.12892 -0.00010544 0.48286 0.00039493 817.88829226323 822.892419537026 78.162 0.73511 78.162 77.883 78.618 0 304 48 9 0 0 0 1.6327E-15 2 42030 130.1 113.47 1 0.74793 0.62013 0 20422000 11485000 8936600 6764 785 2561 2628 10574;10575 10575 618 EAMVQAEEAAAEITR 15 0 1 Oxidation (M) _EAM(ox)VQAEEAAAEITR_ EAM(1)VQAEEAAAEITR EAM(51.84)VQAEEAAAEITR 0 1 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.3917 2 817.888152 1633.76175 66198.17 0.74631 0.0006104 -0.20433 -0.00016712 0.54198 0.00044328 817.888108184499 822.892261352775 78.112 0.55484 78.112 77.79 78.345 0 260 35 10 0 0 0 0.00034014 2 40908 51.841 42.408 1 0.72971 0.62259 0 19989000 11265000 8723700 6765 785 2561 2628 10576;10577 10576 618 EAMVQAEEAAAEITR 15 0 1 Oxidation (M) _EAM(ox)VQAEEAAAEITR_ EAM(1)VQAEEAAAEITR EAM(158.01)VQAEEAAAEITR 0 1 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 817.8887 2 817.888152 1633.76175 66443.09 0.69714 0.00057018 -0.04664 -3.8146E-05 0.6505 0.00053203 817.888582853074 822.892240565543 78.566 0.9296 78.566 78.298 79.227 0 338 59 10 0 0 0 5.6244E-31 4 41423 158.01 132.63 1 0.69409 0.5941 0 20696000 12300000 8395900 6766 785 2561 2628 10578;10579;10580;10581 10578 618 EAMVQAEEAAAEITR 15 0 1 Oxidation (M) _EAM(ox)VQAEEAAAEITR_ EAM(1)VQAEEAAAEITR EAM(73.08)VQAEEAAAEITR 0 1 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 822.8921 2 817.888152 1633.76175 66854.05 0.61355 0.00050181 -0.70386 -0.00057568 -0.090312 -7.3865E-05 817.888188492694 822.890887912211 100.6 0.91194 100.6 100.22 101.13 7.6294E-06 268 66 8 0 0 0 0.0001095 3 56110 73.082 53.839 1 1.3185 1.0991 0 6403700 2464900 3938800 6767 785 2561 2628 10582;10583;10584 10584 618 EAMVQAEEAAAEITR 15 0 1 Unmodified _EAMVQAEEAAAEITR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.8926 2 809.890694 1617.76684 67074.87 0.40006 0.00032401 0.075156 6.0868E-05 0.47522 0.00038487 809.890641505978 814.895382329946 100.58 0.63825 100.58 100.27 100.91 0 267 48 7 0 0 0 0.0002205 2 56791 68.44 61.781 1 1.066 0.8693 0 15339000 7242700 8096100 6768 785 2561 2629 10585;10586 10586 EAMVQAEEAAAEITR 15 0 1 Unmodified _EAMVQAEEAAAEITR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 814.896 2 809.890694 1617.76684 66642.52 0.507 0.00041061 -0.043015 -3.4838E-05 0.46398 0.00037578 809.890720840579 814.895283588183 100.56 0.71457 100.56 100.22 100.93 0 321 54 9 0 0 0 1.8278E-10 2 56011 120.55 104.3 1 1.0102 0.83164 0 14134000 7518300 6615700 6769 785 2561 2629 10587;10588 10588 EAMVQAEEAAAEITRK 16 1 1 Oxidation (M) _EAM(ox)VQAEEAAAEITRK_ EAM(1)VQAEEAAAEITRK EAM(56.82)VQAEEAAAEITRK 0 1 1 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.2938 3 588.292848 1761.85671 NaN NaN NaN -0.3124 -0.00018378 NaN NaN NaN NaN 53.676 0.36934 53.676 53.477 53.846 -3.8147E-06 0 0 0 0.00046707 1 30672 56.817 52.426 1 NaN NaN 0 8078200 8078200 0 6770 785 2562 2630 10589 10589 618 EAMVQAEEAAAEITRK 16 1 1 Oxidation (M) _EAM(ox)VQAEEAAAEITRK_ EAM(1)VQAEEAAAEITRK EAM(40.01)VQAEEAAAEITRK 0 1 1 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.6173 3 588.292848 1761.85671 80565.33 0.50388 0.00029643 -0.97973 -0.00057637 -0.47585 -0.00027994 588.292972575386 594.633872783695 54.179 0.54382 54.179 53.846 54.39 0 137 49 5 0 0 0 0.0033167 1 30933 40.014 36.173 1 0.70018 0.80448 0 25415000 14097000 11318000 6771 785 2562 2630 10590 10590 618 EANAFEEQLLK 11 1 0 Unmodified _EANAFEEQLLK_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.3288 2 646.330067 1290.64558 76053.44 0.47018 0.00030389 1.8332 0.0011849 2.3034 0.0014888 646.330768930696 650.338214933852 96.352 0.81158 96.352 95.962 96.773 0 157 45 7 0 0 0 0.043074 1 53281 35.652 30.011 1 0.88558 0.69225 0 3404800 1671700 1733100 6772 641 2563 2631 10591 10591 EANEILQR 8 0 1 Unmodified _EANEILQR_ 0 0 0 B4DNJ7;B3KRZ3;Q6ZNB1;Q5H9Q6;P20839;C9K0R9;A0A024R725;C9J381;H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 B4DNJ7;H0Y4R1 H0Y4R1 IMPDH;DKFZp781N0678;IMPDH1;IMPDH2 Inosine-5-monophosphate dehydrogenase;Inosine-5-monophosphate dehydrogenase 1;Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7591 2 486.759081 971.503609 86216.24 0.03961 1.928E-05 0.22411 0.00010909 0.26372 0.00012837 486.759087982188 491.763274714001 30.725 0.50759 30.725 30.52 31.027 1.9073E-06 206 45 7 0 0 0 6.3053E-14 2 15117 166.78 86.553 1 1.3285 1.5283 0 145020000 60959000 84058000 6773 1282;935 2564 2632 10592;10593 10593 EANEILQR 8 0 1 Unmodified _EANEILQR_ 0 0 0 B4DNJ7;B3KRZ3;Q6ZNB1;Q5H9Q6;P20839;C9K0R9;A0A024R725;C9J381;H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 B4DNJ7;H0Y4R1 H0Y4R1 IMPDH;DKFZp781N0678;IMPDH1;IMPDH2 Inosine-5-monophosphate dehydrogenase;Inosine-5-monophosphate dehydrogenase 1;Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.7634 2 486.759081 971.503609 86174.89 0.028421 1.3834E-05 0.13276 6.462E-05 0.16118 7.8454E-05 486.759083467737 491.76317624029 30.134 0.40163 30.134 29.964 30.365 -1.9073E-06 193 33 8 0 0 0 0.0024854 1 14648 113.91 50.34 1 1.3156 1.5112 0 193680000 80286000 113390000 6774 1282;935 2564 2632 10594 10594 EANEILQR 8 0 1 Unmodified _EANEILQR_ 0 0 0 B4DNJ7;B3KRZ3;Q6ZNB1;Q5H9Q6;P20839;C9K0R9;A0A024R725;C9J381;H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 B4DNJ7;H0Y4R1 H0Y4R1 IMPDH;DKFZp781N0678;IMPDH1;IMPDH2 Inosine-5-monophosphate dehydrogenase;Inosine-5-monophosphate dehydrogenase 1;Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.7589 2 486.759081 971.503609 85889.08 0.26029 0.0001267 -0.018981 -9.2393E-06 0.24131 0.00011746 486.758965376139 491.763190491423 34.409 0.44779 34.409 34.211 34.659 0 132 33 5 0 0 0 0.0057275 1 15188 89.55 33.874 1 1.3759 1.1325 0 11800000 5346700 6453000 6775 1282;935 2564 2632 10595 10595 EANEILQR 8 0 1 Unmodified _EANEILQR_ 0 0 0 B4DNJ7;B3KRZ3;Q6ZNB1;Q5H9Q6;P20839;C9K0R9;A0A024R725;C9J381;H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 B4DNJ7;H0Y4R1 H0Y4R1 IMPDH;DKFZp781N0678;IMPDH1;IMPDH2 Inosine-5-monophosphate dehydrogenase;Inosine-5-monophosphate dehydrogenase 1;Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.7635 2 486.759081 971.503609 87715.08 0.33946 0.00016523 -0.12695 -6.1794E-05 0.21251 0.00010344 486.758891832886 491.763103177772 34.555 0.40636 34.555 34.313 34.72 0 137 29 6 0 0 0 0.056307 1 14692 46.426 23.406 1 1.3499 1.1057 0 8949900 3797900 5152100 6776 1282;935 2564 2632 10596 10596 EANFTVSSMHGDMPQK 16 1 0 2 Oxidation (M) _EANFTVSSM(ox)HGDM(ox)PQK_ EANFTVSSM(1)HGDM(1)PQK EANFTVSSM(59.51)HGDM(59.51)PQK 0 2 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.934 3 604.262671 1809.76618 76383.45 0.48453 0.00029278 -0.20184 -0.00012196 0.28269 0.00017082 604.263339916508 606.933852151133 25.201 0.44458 25.201 24.908 25.353 0 61 16 6 0 0 0 9.156E-05 1 10752 59.513 59.513 1 4.4449 4.7225 0 20563000 3354300 17208000 6777 261 2565 2633 10597 10597 197;198 EANFTVSSMHGDMPQK 16 1 0 2 Oxidation (M) _EANFTVSSM(ox)HGDM(ox)PQK_ EANFTVSSM(1)HGDM(1)PQK EANFTVSSM(76.07)HGDM(76.07)PQK 0 2 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 909.898 2 905.890368 1809.76618 NaN NaN NaN -0.30634 -0.00027751 NaN NaN NaN NaN 25.211 0.44458 25.211 24.908 25.353 0 0 0 0 1.9457E-05 2 10690 76.073 70.227 1 NaN NaN 0 14521000 0 14521000 6778 261 2565 2633 10598;10599 10599 197;198 EANLQALIATGGDINAAIER 20 0 1 Unmodified _EANLQALIATGGDINAAIER_ 0 0 0 D3DVA8;A0A024R258;B4DZF6;B3KNI8;B3KNI2;Q59F94;Q9UMX0;Q9NRR5 D3DVA8 D3DVA8 UBQLN4;UBQLN1 Ubiquilin-1;Ubiquilin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1026.0472 2 1020.53964 2039.06473 62010.43 0.77071 0.00078654 -0.88342 -0.00090157 -0.11271 -0.00011503 1021.03997568574 1026.0439270942 119.1 0.252 119.1 119 119.25 0 46 15 5 0 0 0 2.4456E-06 1 76531 66.989 66.989 1 0.82477 0.85766 0 5414900 2526100 2888800 6779 105 2566 2634 10600 10600 EANLQALIATGGDINAAIER 20 0 1 Unmodified _EANLQALIATGGDINAAIER_ 0 0 0 D3DVA8;A0A024R258;B4DZF6;B3KNI8;B3KNI2;Q59F94;Q9UMX0;Q9NRR5 D3DVA8 D3DVA8 UBQLN4;UBQLN1 Ubiquilin-1;Ubiquilin-4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1025.5453 2 1020.53964 2039.06473 NaN NaN NaN 0.37442 0.00038211 NaN NaN NaN NaN 118.67 0.24158 118.67 118.58 118.83 0 0 0 0 9.8831E-07 1 78121 68.83 54.477 1 NaN NaN 0 6488700 0 6488700 6780 105 2566 2634 10601 10601 EANLQALIATGGDINAAIER 20 0 1 Unmodified _EANLQALIATGGDINAAIER_ 0 0 0 D3DVA8;A0A024R258;B4DZF6;B3KNI8;B3KNI2;Q59F94;Q9UMX0;Q9NRR5 D3DVA8 D3DVA8 UBQLN4;UBQLN1 Ubiquilin-1;Ubiquilin-4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1025.5406 2 1020.53964 2039.06473 62541.81 0.51305 0.00052359 -0.038426 -3.9215E-05 0.47463 0.00048438 1020.5400662762 1026.04457367778 131.75 0.31395 131.75 131.57 131.89 0 58 14 6 0 0 0 0.00021227 2 80008 37.013 37.013 1 0.66073 0.57274 0 2500300 1275300 1224900 6781 105 2566 2634 10602;10603 10603 EANNFLWPFK 10 1 0 Unmodified _EANNFLWPFK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3202 2 633.319306 1264.62406 75400.81 0.84184 0.00053315 0.023731 1.5029E-05 0.86557 0.00054818 633.319364857609 637.326276489834 117.29 1.3529 117.29 116.81 118.16 7.6294E-06 527 91 8 0 0 0 3.5357E-40 4 74845 191.78 191.78 1 0.77052 0.90518 0 309100000 180200000 128900000 6782 240 2567 2635 10604;10605;10606;10607 10605 EANNFLWPFK 10 1 0 Unmodified _EANNFLWPFK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3197 2 633.319306 1264.62406 75591.18 0.60075 0.00038047 0.21122 0.00013377 0.81198 0.00051424 633.31941959741 637.326450428167 116.68 1.294 116.68 116.19 117.48 -7.6294E-06 457 79 8 0 0 0 2.1901E-40 3 76184 195.32 195.32 1 0.76476 0.89745 0 337920000 192870000 145050000 6783 240 2567 2635 10608;10609;10610 10609 EANNFLWPFK 10 1 0 Unmodified _EANNFLWPFK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.3276 2 633.319306 1264.62406 76106.98 0.88349 0.00055953 -0.014728 -9.3272E-06 0.86876 0.0005502 633.319263468898 637.326283467062 128.8 1.0399 128.8 128.49 129.52 0 261 47 8 0 0 0 0.0005862 2 77703 84.476 84.476 1 0.86811 0.71753 0 43392000 23237000 20155000 6784 240 2567 2635 10611;10612 10612 EANNFLWPFK 10 1 0 Unmodified _EANNFLWPFK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.3201 2 633.319306 1264.62406 76352.72 0.88478 0.00056035 -0.061848 -3.917E-05 0.82293 0.00052118 633.319257592335 637.326280931024 128.59 1.0179 128.59 128.2 129.22 0 250 41 8 0 0 0 6.755E-06 2 76616 107.66 107.66 1 0.87812 0.72997 0 37928000 20052000 17875000 6785 240 2567 2635 10613;10614 10614 EAPAPVAHPAPGGPEEQWQR 20 0 1 Unmodified _EAPAPVAHPAPGGPEEQWQR_ 0 0 0 Q96KM6 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.6794 3 708.680093 2123.01845 NaN NaN NaN -2.669 -0.0018915 NaN NaN NaN NaN 50.852 0.092514 50.852 50.807 50.899 0 0 0 0 0.038939 1 28760 22.936 14.004 1 NaN NaN 0 4134700 4134700 0 6786 1976 2568 2636 10615 10615 EAPAPVAHPAPGGPEEQWQR 20 0 1 Unmodified _EAPAPVAHPAPGGPEEQWQR_ 0 0 0 Q96KM6 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.3511 3 708.680093 2123.01845 71734.75 0.58495 0.00041454 -0.59116 -0.00041894 -0.006209 -4.4002E-06 709.013580214403 712.34990281216 60.585 0.41267 60.585 60.38 60.793 0 115 38 5 0 0 0 0.00048463 2 30981 34.615 34.615 1 2.0166 1.7376 0 2661400 1057200 1604200 6787 1976 2568 2636 10616;10617 10616 EAPASVVPFVR 11 0 1 Unmodified _EAPASVVPFVR_ 0 0 0 B9A018;Q53GS9;F8WC91 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.3321 2 586.327131 1170.63971 NaN NaN NaN 0.35135 0.00020601 NaN NaN NaN NaN 89.039 0.20117 89.039 88.973 89.174 7.6294E-06 0 0 0 0.0038045 1 53732 66.962 52.097 1 NaN NaN 0 9709100 0 9709100 6788 1119 2569 2637 10618 10618 EAPASVVPFVR 11 0 1 Unmodified _EAPASVVPFVR_ 0 0 0 B9A018;Q53GS9;F8WC91 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.3311 2 586.327131 1170.63971 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.889 1 87.889 87.389 88.389 -7.6294E-06 0 0 0 0.033081 1 54207 47.603 22.727 1 6789 1119 2569 2637 10619 10619 EAPNPIHLTVDTSLQNGR 18 0 1 Unmodified _EAPNPIHLTVDTSLQNGR_ 0 0 0 B4DMT5;B3KSH1;O00303;B4DEW9 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.0074 3 654.672827 1960.99665 77518.59 0.97486 0.00063822 0.55464 0.00036311 1.5295 0.0010013 655.007112814457 658.344031509456 80.899 0.53938 80.899 80.667 81.206 0 201 44 8 0 0 0 0.0047181 1 49361 24.793 24.793 1 1.3609 1.3358 0 13773000 6326800 7446700 6790 939 2570 2638 10620 10620 EAPNPIHLTVDTSLQNGR 18 0 1 Unmodified _EAPNPIHLTVDTSLQNGR_ 0 0 0 B4DMT5;B3KSH1;O00303;B4DEW9 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.3449 3 654.672827 1960.99665 77504.44 0.77219 0.00050553 0.2833 0.00018547 1.0555 0.00069101 655.007218249669 658.343737270612 93.781 0.3734 93.781 93.561 93.934 0 66 26 4 0 0 0 0.039673 1 52400 8.6256 8.6256 1 1.3362 1.1799 0 1463500 553820 909670 6791 939 2570 2638 10621 10621 EAPPMEKPEVVK 12 2 0 Oxidation (M) _EAPPM(ox)EKPEVVK_ EAPPM(1)EKPEVVK EAPPM(118.23)EKPEVVK 0 1 1 S4R456;K7EM56;A0A0B4J2B4;K7EJ78;S4R417;K7EQJ5;K7ELC2;P62841 S4R456 S4R456 RPS15 40S ribosomal protein S15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.3555 2 685.355228 1368.6959 72344.55 0.71524 0.00049019 -0.27688 -0.00018976 0.43836 0.00030043 685.355267757078 693.369417966995 24.002 0.33574 24.002 23.789 24.125 0 104 16 9 0 0 0 2.6868E-08 1 9747 118.23 91.186 1 1.374 1.6215 0 117050000 50733000 66322000 6792 504 2571 2639 10622 10622 355 EAPPMEKPEVVK 12 2 0 Oxidation (M) _EAPPM(ox)EKPEVVK_ EAPPM(1)EKPEVVK EAPPM(84.88)EKPEVVK 0 1 1 S4R456;K7EM56;A0A0B4J2B4;K7EJ78;S4R417;K7EQJ5;K7ELC2;P62841 S4R456 S4R456 RPS15 40S ribosomal protein S15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3697 2 685.355228 1368.6959 72756.81 0.88606 0.00060727 -0.39733 -0.00027231 0.48873 0.00033495 685.354955707737 693.369252638312 24.249 0.37489 24.249 24.104 24.479 0 96 15 9 0 0 0 0.00019523 1 9998 84.882 61.563 1 1.4482 1.7091 0 107280000 44931000 62346000 6793 504 2571 2639 10623 10623 355 EAPPMEKPEVVK 12 2 0 Oxidation (M) _EAPPM(ox)EKPEVVK_ EAPPM(1)EKPEVVK EAPPM(45.36)EKPEVVK 0 1 1 S4R456;K7EM56;A0A0B4J2B4;K7EJ78;S4R417;K7EQJ5;K7ELC2;P62841 S4R456 S4R456 RPS15 40S ribosomal protein S15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.2391 3 457.239244 1368.6959 87212.14 0.54061 0.00024719 -0.41589 -0.00019016 0.12473 5.703E-05 457.239367623535 462.581773843245 24.251 0.43404 24.251 24.104 24.538 0 125 17 10 0 0 0 0.0029932 1 10047 45.357 33.436 1 1.5962 1.8836 0 128470000 52458000 76017000 6794 504 2571 2639 10624 10624 355 EAPPMEKPEVVK 12 2 0 Oxidation (M) _EAPPM(ox)EKPEVVK_ EAPPM(1)EKPEVVK EAPPM(99.34)EKPEVVK 0 1 1 S4R456;K7EM56;A0A0B4J2B4;K7EJ78;S4R417;K7EQJ5;K7ELC2;P62841 S4R456 S4R456 RPS15 40S ribosomal protein S15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.37 2 685.355228 1368.6959 72010.73 0.54796 0.00037554 -0.20021 -0.00013721 0.34775 0.00023833 685.355252710627 693.369391364691 23.659 0.372 23.659 23.42 23.792 0 81 15 9 0 0 0 3.3425E-05 2 9502 99.34 68.23 1 1.4479 1.6823 0 122570000 49875000 72693000 6795 504 2571 2639 10625;10626 10626 355 EAQAVPATLPELEATK 16 1 0 Unmodified _EAQAVPATLPELEATK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.4548 2 834.44616 1666.87777 NaN NaN NaN -0.237 -0.00019776 NaN NaN NaN NaN 91.494 0.64841 91.494 91.266 91.915 0 0 0 0 0.0028077 1 55278 58.674 43.798 1 NaN NaN 0 22748000 0 22748000 6796 1754 2572 2640 10627 10627 EAQAVPATLPELEATK 16 1 0 Unmodified _EAQAVPATLPELEATK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.4468 2 834.44616 1666.87777 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.489 1 91.489 90.989 91.989 0 0 0 0 0.00011458 1 55388 85.522 60.667 1 6797 1754 2572 2640 10628 10628 EAQAVPATLPELEATK 16 1 0 Unmodified _EAQAVPATLPELEATK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.4539 2 834.44616 1666.87777 NaN NaN NaN -0.17828 -0.00014877 NaN NaN NaN NaN 90.704 0.71876 90.704 90.462 91.181 0 0 0 0 1.9278E-08 2 56011 94.122 69.83 1 NaN NaN 0 12768000 0 12768000 6798 1754 2572 2640 10629;10630 10629 EAQAVPATLPELEATK 16 1 0 Unmodified _EAQAVPATLPELEATK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.4536 2 834.44616 1666.87777 67001.27 0.57666 0.00048119 -0.12407 -0.00010353 0.45259 0.00037767 834.446548838778 838.453134423226 104.83 0.59629 104.83 104.54 105.13 0 162 33 6 0 0 0 0.0030589 1 58771 38.238 38.238 1 2.7941 2.2787 0 5783200 1377700 4405400 6799 1754 2572 2640 10631 10631 EAQDIILQLR 10 0 1 Unmodified _EAQDIILQLR_ 0 0 0 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.8481 2 599.843145 1197.67174 NaN NaN NaN 0.64103 0.00038452 NaN NaN NaN NaN 107.65 0.68574 107.65 107.36 108.04 0 0 0 0 1.9453E-06 1 60801 105.52 74.291 1 NaN NaN 0 3375900 0 3375900 6800 1075 2573 2641 10632 10632 EAQELSQNSAIK 12 1 0 Unmodified _EAQELSQNSAIK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.3378 2 659.335881 1316.65721 74189.33 0.17387 0.00011464 0.2881 0.00018996 0.46197 0.00030459 659.335820504833 663.342953891902 29.179 0.36078 29.179 28.983 29.344 0 116 20 9 0 0 0 1.0535E-103 2 14029 242.59 222.81 1 1.1438 1.3111 0 192920000 90798000 102130000 6801 2065 2574 2642 10633;10634 10634 EAQELSQNSAIK 12 1 0 Unmodified _EAQELSQNSAIK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.3353 2 659.335881 1316.65721 73894.08 0.69102 0.00045562 0.58909 0.00038841 1.2801 0.00084402 659.335980531176 663.343091563268 28.539 0.59302 28.539 28.286 28.879 0 290 53 8 0 0 0 4.3101E-18 2 13567 145.99 128.89 1 1.1082 1.244 0 115500000 55801000 59696000 6802 2065 2574 2642 10635;10636 10636 EAQELSQNSAIK 12 1 0 Unmodified _EAQELSQNSAIK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.3367 2 659.335881 1316.65721 73899.44 0.53154 0.00035046 0.10237 6.7493E-05 0.6339 0.00041796 659.335779873769 663.342893043084 33.226 0.5895 33.226 32.974 33.564 0 268 50 9 0 0 0 9.881E-23 1 14475 156.48 147.73 1 1.1925 1.019 0 67167000 29339000 37828000 6803 2065 2574 2642 10637 10637 EAQELSQNSAIK 12 1 0 Unmodified _EAQELSQNSAIK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.3364 2 659.335881 1316.65721 73973.33 0.46328 0.00030546 0.17539 0.00011564 0.63867 0.0004211 659.335807678834 663.342850061974 33.397 0.5677 33.397 33.213 33.781 0 259 47 8 0 0 0 7.9903E-48 2 14098 188.91 174.05 1 1.2365 1.0413 0 52882000 23897000 28985000 6804 2065 2574 2642 10638;10639 10639 EAQLYAAQAHLK 12 1 0 Unmodified _EAQLYAAQAHLK_ 0 0 0 Q53H03;P49321;E9PI86;O95138;Q5T626;Q5T624;E9PRH9;B4DS57;H0YF33;Q9P1N1 Q53H03 Q53H03 NASP Nuclear autoantigenic sperm protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.8684 2 671.859326 1341.7041 74462.52 0.90902 0.00061073 0.48328 0.0003247 1.3923 0.00093543 671.860040636224 675.866298733676 41.058 0.28365 41.058 40.877 41.161 0 82 22 5 0 0 0 2.3758E-05 1 21494 101.65 90.053 1 1.623 1.6474 0 13543000 5648700 7894500 6805 1579 2575 2643 10640 10640 EAQLYAAQAHLK 12 1 0 Unmodified _EAQLYAAQAHLK_ 0 0 0 Q53H03;P49321;E9PI86;O95138;Q5T626;Q5T624;E9PRH9;B4DS57;H0YF33;Q9P1N1 Q53H03 Q53H03 NASP Nuclear autoantigenic sperm protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.8671 2 671.859326 1341.7041 75763.27 0.90819 0.00061018 0.23652 0.00015891 1.1447 0.00076908 671.860193340422 675.866326456716 39.949 0.41811 39.949 39.682 40.1 0 86 35 4 0 0 0 0.00020953 1 21268 80.688 70.317 1 1.5195 1.5221 0 13906000 5204100 8702000 6806 1579 2575 2643 10641 10641 EAQTSFLHLGYLPNQLFR 18 0 1 Unmodified _EAQTSFLHLGYLPNQLFR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.3766 3 712.040851 2133.10072 73366.88 0.9627 0.00068548 -0.14504 -0.00010327 0.81766 0.00058221 712.375136423723 715.711327493436 120.58 0.58511 120.58 120.28 120.86 0 274 41 8 0 0 0 0.00016279 2 77641 44.005 44.005 1 0.89022 0.90975 0 18911000 9180300 9730300 6807 452 2576 2644 10642;10643 10642 EAQTSFLHLGYLPNQLFR 18 0 1 Unmodified _EAQTSFLHLGYLPNQLFR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.3755 3 712.040851 2133.10072 72653.95 0.94945 0.00067605 -0.11172 -7.955E-05 0.83773 0.0005965 712.375250488303 715.711295195707 119.87 0.72298 119.87 119.49 120.21 7.6294E-06 309 53 9 0 0 0 0.0023925 2 78977 31.233 31.233 1 0.95158 0.9886 0 22047000 11423000 10624000 6808 452 2576 2644 10644;10645 10645 EAQTSFLHLGYLPNQLFR 18 0 1 Unmodified _EAQTSFLHLGYLPNQLFR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.7122 3 712.040851 2133.10072 70897.3 1.0444 0.00074367 -0.54583 -0.00038866 0.49859 0.00035502 712.040525981616 715.710829336759 132.17 0.66112 132.17 131.81 132.47 0 141 31 9 0 0 0 0.00012239 2 80373 45.618 45.618 1 1.1884 0.99847 0 9939700 5244400 4695200 6809 452 2576 2644 10646;10647 10647 EAQTSFLHLGYLPNQLFR 18 0 1 Unmodified _EAQTSFLHLGYLPNQLFR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.3762 3 712.040851 2133.10072 70631.05 1.0853 0.00077277 -0.41547 -0.00029583 0.66982 0.00047694 712.376056326213 715.373444786997 131.88 0.70169 131.88 131.5 132.2 0 138 28 13 0 0 0 0.00025027 2 79204 40.515 40.515 1 1.3797 1.2011 0 24856000 10491000 14365000 6810 452 2576 2644 10648;10649 10648 EASDLLEQNR 10 0 1 Unmodified _EASDLLEQNR_ 0 0 0 J3KSW8;U6FSN9;Q6WCQ1;B9EGI2;Q8N236;H0Y2S9 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.793 2 587.788566 1173.56258 NaN NaN NaN -0.15526 -9.1259E-05 NaN NaN NaN NaN 38.136 0.35846 38.136 37.933 38.291 0 0 0 0 0.00053294 1 19950 90.906 71.65 1 NaN NaN 0 10933000 0 10933000 6811 1330 2577 2645 10650 10650 EASDPQPEEADGGLK 15 1 0 Unmodified _EASDPQPEEADGGLK_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.8578 2 771.849549 1541.68455 70181.52 1.1122 0.00085844 -0.30536 -0.00023569 0.80682 0.00062275 771.84947886695 775.85596523398 32.107 0.48058 32.107 31.829 32.31 0 159 46 6 0 0 0 0.00022216 2 15884 67.08 59.699 1 1.2008 1.2318 0 14432000 6376200 8055600 6812 43 2578 2646 10651;10652 10652 EASDPQPEEADGGLK 15 1 0 Unmodified _EASDPQPEEADGGLK_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.8499 2 771.849549 1541.68455 69116.82 0.96836 0.00074743 -0.52963 -0.0004088 0.43873 0.00033863 771.849529656707 775.855665379852 31.577 0.54389 31.577 31.217 31.761 0 153 48 5 0 0 0 1.28E-07 2 15553 110.08 108.23 1 1.3943 1.409 0 16370000 7561600 8808300 6813 43 2578 2646 10653;10654 10653 EASEDASALGSSSYK 15 1 0 Unmodified _EASEDASALGSSSYK_ 0 0 0 Q9Y4C8 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.3379 2 751.336275 1500.658 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.252 1 35.252 34.752 35.752 0 0 0 0 0.0013025 1 17707 60.161 41.489 1 6814 2145 2579 2647 10655 10655 EASEDASALGSSSYK 15 1 0 Unmodified _EASEDASALGSSSYK_ 0 0 0 Q9Y4C8 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.3445 2 751.336275 1500.658 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.339 1 35.339 34.839 35.839 0 0 0 0 0.0086147 1 17760 49.423 42.734 1 6815 2145 2579 2647 10656 10656 EASGDLPEAQIVK 13 1 0 Unmodified _EASGDLPEAQIVK_ 0 0 0 P52948;H7C3P6;A0A024RCC4 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.8546 2 678.853906 1355.69326 75425.61 0.78365 0.00053198 -0.25983 -0.00017639 0.52382 0.0003556 678.853518146779 682.860785580918 65.898 0.53309 65.898 65.695 66.228 0 157 50 5 0 0 0 0.0099391 1 37948 42.243 42.243 1 1.4446 1.4939 0 12731000 4645900 8084900 6816 1603 2580 2648 10657 10657 EASGETTGVDITK 13 1 0 Unmodified _EASGETTGVDITK_ 0 0 0 B4DLG2;O75152;E9PQ61 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.3265 2 654.319896 1306.62524 75220.58 0.48603 0.00031802 -0.54785 -0.00035847 -0.06182 -4.045E-05 654.319864043015 658.326731595842 39.307 0.54873 39.307 39.125 39.674 0 112 40 4 0 0 0 0.039731 1 17924 31.478 31.478 1 1.1547 0.95823 0 2286700 1364300 922340 6817 996 2581 2649 10658 10658 EASILLGD 8 0 0 Unmodified _EASILLGD_ 0 0 0 Q9NPD3 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.4327 1 817.430175 816.422899 NaN NaN NaN -0.15091 -0.00012336 NaN NaN NaN NaN 90.599 0.76828 90.599 90.134 90.902 0 0 0 0 0.0075151 1 56102 90.706 76.931 1 6818 2056 2582 2650 10659 10659 EASLQFVVEPSEATNR 16 0 1 Unmodified _EASLQFVVEPSEATNR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.9418 2 888.941773 1775.86899 65437.52 1.0483 0.00093186 -0.45577 -0.00040516 0.5925 0.0005267 889.442958717372 893.945742750674 91.218 0.57081 91.218 90.945 91.516 0 219 45 8 0 0 0 2.9834E-05 3 55074 85.288 85.288 1 0.62034 0.63456 0 35700000 19444000 16256000 6819 1681 2583 2651 10660;10661;10662 10662 EASLQFVVEPSEATNR 16 0 1 Unmodified _EASLQFVVEPSEATNR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.9465 2 888.941773 1775.86899 65023.85 0.96194 0.00085511 -0.31083 -0.00027631 0.65111 0.0005788 888.941489132205 893.945918411927 90.312 0.51049 90.312 90.144 90.655 0 262 44 8 0 0 0 1.2378E-08 1 55751 105.65 105.65 1 0.68069 0.7432 0 39059000 22985000 16074000 6820 1681 2583 2651 10663 10663 EASLQFVVEPSEATNR 16 0 1 Unmodified _EASLQFVVEPSEATNR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.9421 2 888.941773 1775.86899 64200.21 0.49419 0.00043931 0.305 0.00027112 0.79919 0.00071043 889.443805401462 893.946101814139 104.3 0.8361 104.3 103.93 104.77 7.6294E-06 306 53 8 0 0 0 0.00038625 2 59385 51.211 45.932 1 1.3843 1.1466 0 11190000 4453400 6736500 6821 1681 2583 2651 10664;10665 10665 EASLQFVVEPSEATNR 16 0 1 Unmodified _EASLQFVVEPSEATNR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 888.9427 2 888.941773 1775.86899 64739.29 0.091804 8.1609E-05 0.63316 0.00056284 0.72496 0.00064445 888.942222728156 893.946257971641 104.14 0.93298 104.14 103.74 104.67 0 311 58 8 0 0 0 0.00015153 1 58332 62.14 62.14 1 1.4544 1.1759 0 10653000 4744700 5907900 6822 1681 2583 2651 10666 10666 EASYSLIR 8 0 1 Unmodified _EASYSLIR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.7505 2 469.750724 937.486896 87654.25 0.048966 2.3002E-05 0.23621 0.00011096 0.28517 0.00013396 469.750765079943 474.754760695722 52.355 1.1857 52.355 51.686 52.872 0 427 90 8 0 0 0 0.0096168 2 28948 74.127 46.185 1 0.7349 0.87011 0 385180000 233090000 152090000 6823 1817 2584 2652 10667;10668 10668 EASYSLIR 8 0 1 Unmodified _EASYSLIR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 474.755 2 469.750724 937.486896 86903.49 0.11277 5.2973E-05 0.037759 1.7737E-05 0.15053 7.071E-05 469.750690671265 474.754762865794 59.909 1.06 59.909 59.477 60.537 0 374 77 8 0 0 0 0.0087497 2 30492 77.282 50.32 1 0.90377 0.77705 0 45637000 23894000 21744000 6824 1817 2584 2652 10669;10670 10669 EASYSLIR 8 0 1 Unmodified _EASYSLIR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 474.7548 2 469.750724 937.486896 87593.94 0.22166 0.00010412 -0.15144 -7.1141E-05 0.070216 3.2984E-05 469.750564872556 474.75467136384 60.256 1.1252 60.256 59.84 60.965 -3.8147E-06 422 86 8 0 0 0 0.011754 2 30059 69.198 42.596 1 0.92863 0.81002 0 36154000 18159000 17994000 6825 1817 2584 2652 10671;10672 10671 EATADDLIK 9 1 0 Unmodified _EATADDLIK_ 0 0 0 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2544 2 488.253297 974.492041 NaN NaN NaN 0.69021 0.000337 NaN NaN NaN NaN 44.701 0.54719 44.701 44.457 45.005 -3.8147E-06 0 0 0 0.048213 1 23919 47.603 22.68 1 NaN NaN 0 38872000 38872000 0 6826 1770 2585 2653 10673 10673 EATADDLIK 9 1 0 Unmodified _EATADDLIK_ 0 0 0 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.2553 2 488.253297 974.492041 NaN NaN NaN -0.008461 -4.1311E-06 NaN NaN NaN NaN 43.982 0.92963 43.982 43.735 44.665 0 0 0 0 0.0067325 1 23883 71.692 33.559 1 NaN NaN 0 37509000 37509000 0 6827 1770 2585 2653 10674 10674 EATADDLIK 9 1 0 Unmodified _EATADDLIK_ 0 0 0 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.2537 2 488.253297 974.492041 86594.94 0.032327 1.5784E-05 0.30012 0.00014653 0.33245 0.00016232 488.253456456775 492.26039469633 51.616 1.0031 51.616 51.085 52.088 3.8147E-06 343 70 7 0 0 0 0.03089 1 24684 45.68 20.757 1 1.3045 1.0715 0 9474900 4167000 5307900 6828 1770 2585 2653 10675 10675 EATAQKPTGSVGSTVTTPPPLVR 23 1 1 Unmodified _EATAQKPTGSVGSTVTTPPPLVR_ 0 0 1 A0A024R7K7;A0A024R7M6;Q86YP4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.4238 3 765.416535 2293.22777 69409.22 0.74821 0.00057269 -0.95535 -0.00073124 -0.20714 -0.00015855 765.750514908307 771.758141860017 68.289 0.36877 68.289 68.107 68.476 0 141 27 7 0 0 0 0.00040801 2 40497 34.658 30.306 1 1.0806 1.2387 0 23413000 12442000 10972000 6829 229 2586 2654 10676;10677 10676 EATAQKPTGSVGSTVTTPPPLVR 23 1 1 Unmodified _EATAQKPTGSVGSTVTTPPPLVR_ 0 0 1 A0A024R7K7;A0A024R7M6;Q86YP4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.4164 3 765.416535 2293.22777 69708.63 0.59847 0.00045808 -0.29102 -0.00022275 0.30746 0.00023533 765.750842625449 771.42398349849 79.86 0.72091 79.86 79.553 80.274 0 205 42 9 0 0 0 0.055834 1 42160 12.802 12.802 1 1.949 1.6395 0 4419100 1394700 3024400 6830 229 2586 2654 10678 10678 EATDAIGHLDR 11 0 1 Unmodified _EATDAIGHLDR_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.3008 2 599.296559 1196.57856 NaN NaN NaN -2.9764 -0.0017838 NaN NaN NaN NaN 33.342 0.45343 33.342 33.151 33.604 0 0 0 0 0.0025118 1 16676 73.885 49.73 1 NaN NaN 0 7966500 0 7966500 6831 220 2587 2655 10679 10679 EATGHFQESEPFSHIDPEESEETR 24 0 1 Unmodified _EATGHFQESEPFSHIDPEESEETR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 930.4033 3 930.07048 2787.18961 63886.08 0.48251 0.00044877 0.018724 1.7415E-05 0.50123 0.00046618 930.738972602553 933.741450927514 67.275 0.48133 67.275 67.054 67.535 0 182 38 6 0 0 0 1.5119E-09 4 38854 58.015 58.015 1 0.8768 0.90898 0 22817000 11923000 10894000 6832 908 2588 2656 10680;10681;10682;10683 10682 EATGHFQESEPFSHIDPEESEETR 24 0 1 Unmodified _EATGHFQESEPFSHIDPEESEETR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 930.4041 3 930.07048 2787.18961 64080.11 0.2942 0.00027363 0.26763 0.00024892 0.56183 0.00052255 930.738918661431 933.741615403649 65.709 0.48953 65.709 65.488 65.978 0 221 42 8 0 0 0 5.2044E-22 2 38721 111.97 111.97 1 0.9158 1.0279 0 45619000 21856000 23763000 6833 908 2588 2656 10684;10685 10684 EATGHFQESEPFSHIDPEESEETR 24 0 1 Unmodified _EATGHFQESEPFSHIDPEESEETR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.8047 4 697.804679 2787.18961 72313.84 0.41429 0.00028909 0.087754 6.1235E-05 0.50204 0.00035033 698.055400113944 700.557517348175 76.747 0.74647 76.747 76.335 77.081 0 315 49 13 0 0 0 0.011514 1 40915 23.917 23.917 1 1.5524 1.3089 0 28534000 11769000 16765000 6834 908 2588 2656 10686 10686 EATGHFQESEPFSHIDPEESEETR 24 0 1 Unmodified _EATGHFQESEPFSHIDPEESEETR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 930.405 3 930.07048 2787.18961 62988.81 0.50628 0.00047088 -0.29977 -0.00027881 0.20651 0.00019207 930.404796283516 933.74078921411 76.747 0.39369 76.747 76.544 76.938 0 174 23 10 0 0 0 0.010616 1 41033 21.291 21.291 1 1.6074 1.3816 0 6565000 2539300 4025600 6835 908 2588 2656 10687 10687 EATHSSGFSGSSASVASTSSIK 22 1 0 Unmodified _EATHSSGFSGSSASVASTSSIK_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.6681 3 695.662545 2083.96581 71933.49 0.74069 0.00051527 -0.36081 -0.000251 0.37988 0.00026426 695.662408967387 698.667962573913 39.006 0.29682 39.006 38.807 39.104 0 104 24 6 0 0 0 0.037177 1 20609 13.332 10.272 1 1.1985 1.2072 0 16148000 5903700 10244000 6836 1396 2589 2657 10688 10688 EATNPPVIQEEK 12 1 0 Unmodified _EATNPPVIQEEK_ 0 0 0 B4DDM1;B3KQT9;B3KQT2;V9HVY3;P30101 B4DDM1 B4DDM1 HEL-S-269;PDIA3 Protein disulfide-isomerase;Protein disulfide-isomerase A3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.8538 2 677.846081 1353.67761 NaN NaN NaN 0.34399 0.00023317 NaN NaN NaN NaN 38.1 0.35031 38.1 37.908 38.259 0 0 0 0 0.028871 1 19534 47.971 37.214 1 NaN NaN 0 4770400 0 4770400 6837 930 2590 2658 10689 10689 EATNPPVIQEEK 12 1 0 Unmodified _EATNPPVIQEEK_ 0 0 0 B4DDM1;B3KQT9;B3KQT2;V9HVY3;P30101 B4DDM1 B4DDM1 HEL-S-269;PDIA3 Protein disulfide-isomerase;Protein disulfide-isomerase A3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.854 2 677.846081 1353.67761 75072.91 0.51685 0.00035034 0.22144 0.0001501 0.73829 0.00050045 677.846164425969 681.853548117418 37.251 0.34903 37.251 37.023 37.372 0 79 28 4 0 0 0 0.016404 1 19278 42.21 42.21 1 1.3053 1.3544 0 11232000 4093700 7138200 6838 930 2590 2658 10690 10690 EATTEFSVDAR 11 0 1 Unmodified _EATTEFSVDAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.2916 2 613.288399 1224.56225 78297.73 0.7383 0.00045279 -0.31958 -0.00019599 0.41872 0.0002568 613.2881548349 618.292272792816 48.818 0.6955 48.818 48.449 49.145 0 197 53 7 0 0 0 2.2671E-05 1 26591 103.88 92.727 1 1.4006 1.5523 0 64920000 25618000 39302000 6839 1504 2591 2659 10691 10691 EATTEFSVDAR 11 0 1 Unmodified _EATTEFSVDAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.2924 2 613.288399 1224.56225 76305.77 0.050145 3.0753E-05 0.51869 0.00031811 0.56884 0.00034886 613.288754823609 618.292529715843 47.668 0.52061 47.668 47.426 47.946 -3.8147E-06 163 36 8 0 0 0 0.00022817 1 26599 91.584 80.433 1 1.3775 1.5769 0 85667000 35773000 49894000 6840 1504 2591 2659 10692 10692 EATTEFSVDAR 11 0 1 Unmodified _EATTEFSVDAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.2927 2 613.288399 1224.56225 NaN NaN NaN -0.072669 -4.4567E-05 NaN NaN NaN NaN 56.079 0.65659 56.079 55.77 56.426 -3.8147E-06 0 0 0 0.0082394 1 28134 61.353 54.458 1 NaN NaN 0 3677100 0 3677100 6841 1504 2591 2659 10693 10693 EATTTLHMLTLLK 13 1 0 Oxidation (M) _EATTTLHM(ox)LTLLK_ EATTTLHM(1)LTLLK EATTTLHM(48.44)LTLLK 0 1 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.4194 2 744.410534 1486.80652 NaN NaN NaN 0.05551 4.1322E-05 NaN NaN NaN NaN 78.391 0.41402 78.391 78.157 78.571 0 0 0 0 0.0059301 1 47438 48.44 48.44 1 NaN NaN 0 9354800 0 9354800 6842 907 2592 2660 10694 10694 728 EATWTMSNITAGR 13 0 1 Oxidation (M) _EATWTM(ox)SNITAGR_ EATWTM(1)SNITAGR EATWTM(53.08)SNITAGR 0 1 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.341 2 727.34064 1452.66673 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.411 1 52.411 51.911 52.911 0 0 0 0 0.0053824 1 29872 53.08 38.962 1 6843 769 2593 2661 10695 10695 595 EAVEENGVITDK 12 1 0 Unmodified _EAVEENGVITDK_ 0 0 0 V9HWH0;Q96KB5 V9HWH0 V9HWH0 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.3311 2 652.322439 1302.63033 77275.18 1.033 0.00067382 -0.4082 -0.00026628 0.62476 0.00040754 653.324600301521 656.329202099107 36.434 0.35699 36.434 36.242 36.599 0 83 30 6 0 0 0 9.6174E-05 1 18700 96.015 82.245 1 1.7494 1.7464 0 14223000 3738100 10484000 6844 1975 2594 2662 10696 10696 EAVEQFESQGVDLSNIVK 18 1 0 Unmodified _EAVEQFESQGVDLSNIVK_ 0 0 0 Q6NXE6;F5H2X2;F5H2K4;F5GWV0;F5H4P3;F5H3X1;F5H052 Q6NXE6 Q6NXE6 ARMC6 Armadillo repeat-containing protein 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1001.0081 2 996.499652 1990.98475 NaN NaN NaN -0.82731 -0.00082442 NaN NaN NaN NaN 107.84 0.29026 107.84 107.66 107.95 7.6294E-06 0 0 0 0.0010299 1 68810 54.524 46.42 1 NaN NaN 0 3924100 0 3924100 6845 1848 2595 2663 10697 10697 EAVFATCGQQVDIWDEQR 18 0 1 Unmodified _EAVFATCGQQVDIWDEQR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9;A0A087X1F8;E5RHM4 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1076.4919 2 1076.49184 2150.96912 58179.62 0.40287 0.00043368 0.01921 2.0679E-05 0.42208 0.00045436 1076.9929565996 1081.49563305668 112.48 0.49664 112.48 112.25 112.74 0 128 26 8 0 0 0 8.3022E-05 3 65286 49.482 49.482 1 1.2675 1.0736 0 9369700 4100800 5268800 6846 402 2596 2664 10698;10699;10700 10700 EAVFATCGQQVDIWDEQR 18 0 1 Unmodified _EAVFATCGQQVDIWDEQR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9;A0A087X1F8;E5RHM4 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1081.9963 2 1076.49184 2150.96912 58495.31 0.14785 0.00015916 -0.011554 -1.2438E-05 0.1363 0.00014673 1076.99365021833 1081.99713324341 112.41 0.39625 112.41 112.2 112.6 0 112 22 7 0 0 0 0.032956 1 64298 23.008 23.008 1 1.2727 1.0595 0 7146200 2881300 4264900 6847 402 2596 2664 10701 10701 EAVGGQAEDHLK 12 1 0 Unmodified _EAVGGQAEDHLK_ 0 0 0 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.317 2 627.309666 1252.60478 79917.34 0.46067 0.00028898 -0.27728 -0.00017394 0.18339 0.00011504 627.309144421378 631.316568750424 21.047 0.22098 21.047 20.959 21.18 0 29 11 5 0 0 0 0.0022514 1 7280 59.067 49.287 1 0.82545 0.87174 0 4256200 2364100 1892100 6848 470 2597 2665 10702 10702 EAVILPIK 8 1 0 Unmodified _EAVILPIK_ 0 0 0 A0A024R705;Q9UN37;I3L4J1;A8K5D8;A8K4G7;A0A024R2C5;O75351 A0A024R705 A0A024R705 VPS4A;VPS4B Vacuolar protein sorting-associated protein 4A;Vacuolar protein sorting-associated protein 4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.7934 2 441.786579 881.558604 93371.38 0.41269 0.00018232 -0.17266 -7.628E-05 0.24003 0.00010604 441.786487942194 445.793498291241 84.654 0.5892 84.654 84.312 84.902 0 126 47 4 0 0 0 0.016959 1 50699 60.76 34.651 1 2.6444 2.7674 0 12055000 2905000 9149800 6849 213 2598 2666 10703 10703 EAVLLLK 7 1 0 Unmodified _EAVLLLK_ 0 0 0 P36578;Q59GY2;H3BM89;B4DFI6;Q53G74;B4DMJ2;H3BTP7 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 393.2598 2 393.260197 784.50584 94961.33 0.14374 5.6528E-05 0.11276 4.4345E-05 0.2565 0.00010087 393.260179531906 397.267213499376 83.123 1.2548 83.123 82.671 83.926 0 402 83 8 0 0 0 0.056031 1 45589 52.299 13.928 1 1.0942 0.91542 0 50639000 24121000 26518000 6850 1548 2599 2667 10704 10704 EAVLNAYR 8 0 1 Unmodified _EAVLNAYR_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.2508 2 468.250892 934.48723 86799.59 0.31313 0.00014662 0.080637 3.7758E-05 0.39377 0.00018438 468.250827271489 473.255135951301 40.385 0.72643 40.385 40.013 40.74 0 307 63 9 0 0 0 2.7374E-05 2 21015 138.62 84.091 1 0.92876 1.0993 0 351350000 181440000 169910000 6851 908 2600 2668 10705;10706 10705 EAVLNAYR 8 0 1 Unmodified _EAVLNAYR_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.2507 2 468.250892 934.48723 86982.63 0.30056 0.00014074 0.18474 8.6504E-05 0.4853 0.00022724 468.250816717278 473.255220607882 39.364 0.74065 39.364 39.008 39.749 0 282 62 8 0 0 0 3.4057E-14 3 20783 170.94 116.42 1 0.91026 1.059 0 405630000 220220000 185410000 6852 908 2600 2668 10707;10708;10709 10709 EAVLNAYR 8 0 1 Unmodified _EAVLNAYR_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.2553 2 468.250892 934.48723 87086.53 0.1086 5.0852E-05 0.17577 8.2303E-05 0.28437 0.00013316 468.250904346694 473.255014457779 46.006 0.90698 46.006 45.731 46.638 0 340 65 8 0 0 0 0.0023307 2 22019 100.74 70.557 1 1.4689 1.2592 0 41539000 15694000 25845000 6853 908 2600 2668 10710;10711 10711 EAVLNAYR 8 0 1 Unmodified _EAVLNAYR_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.25 2 468.250892 934.48723 86661.14 0.17063 7.9899E-05 -0.19205 -8.9926E-05 -0.021415 -1.0028E-05 468.250810826298 473.254798360391 46.083 0.89606 46.083 45.781 46.677 0 293 54 8 0 0 0 0.0019669 2 21534 104.11 74.735 1 1.5688 1.3685 0 45211000 17714000 27497000 6854 908 2600 2668 10712;10713 10713 EAVQLVNTR 9 0 1 Unmodified _EAVQLVNTR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.292 2 515.288005 1028.56146 NaN NaN NaN 0.22706 0.000117 NaN NaN NaN NaN 40.32 0.54749 40.32 39.947 40.494 0 0 0 0 0.00017706 1 21504 93.267 36.089 1 NaN NaN 0 60648000 0 60648000 6855 1611 2601 2669 10714 10714 EAVQLVNTR 9 0 1 Unmodified _EAVQLVNTR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.2916 2 515.288005 1028.56146 NaN NaN NaN 0.37987 0.00019574 NaN NaN NaN NaN 47.055 0.31339 47.055 46.885 47.198 0 0 0 0 0.040651 1 22194 50.04 23.656 1 NaN NaN 0 1945200 0 1945200 6856 1611 2601 2669 10715 10715 EAVQLVNTREEVEDLCR 17 0 2 Unmodified _EAVQLVNTREEVEDLCR_ 0 0 1 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.0129 3 687.340749 2059.00042 NaN NaN NaN 0.087709 6.0286E-05 NaN NaN NaN NaN 89.976 0.39523 89.976 89.734 90.129 0 0 0 0 0.044218 1 49804 33.308 23.902 1 NaN NaN 0 1485100 0 1485100 6857 1611 2602 2670 10716 10716 EAVVHLR 7 0 1 Unmodified _EAVVHLR_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 412.2426 2 412.24287 822.471186 93586.59 0.13808 5.6921E-05 -0.68045 -0.00028051 -0.54238 -0.00022359 412.242202761852 417.246887802585 25.403 0.41939 25.403 25.214 25.633 0 82 22 6 0 0 0 0.012017 2 11000 106.76 54.53 1 0.53655 0.57572 0 46484000 29618000 16867000 6858 1849 2603 2671 10717;10718 10718 EAVVHLR 7 0 1 Unmodified _EAVVHLR_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 412.2428 2 412.24287 822.471186 93243.73 -0.17044 -7.0261E-05 -0.080453 -3.3166E-05 -0.25089 -0.00010343 412.242415690058 417.247054534992 27.568 0.414 27.568 27.342 27.756 1.9073E-06 65 15 6 0 0 0 0.032358 1 10776 65.672 29.116 1 1.341 1.1356 0 4999000 2110000 2889000 6859 1849 2603 2671 10719 10719 EAVVHLR 7 0 1 Unmodified _EAVVHLR_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 412.2428 2 412.24287 822.471186 93019.27 -0.56765 -0.00023401 0.60474 0.0002493 0.037087 1.5289E-05 412.242898321359 417.247145434783 27.385 0.43784 27.385 27.194 27.632 0 72 17 6 0 0 0 0.03153 2 10144 66.994 28.22 1 1.2436 1.0698 0 3372200 1499000 1873300 6860 1849 2603 2671 10720;10721 10721 EAVVQEPER 9 0 1 Unmodified _EAVVQEPER_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.7698 2 528.769645 1055.52474 NaN NaN NaN -0.34986 -0.000185 NaN NaN NaN NaN 24.858 0.40554 24.858 24.644 25.05 0 0 0 0 3.6284E-24 1 10535 157.86 102.33 1 NaN NaN 0 47959000 47959000 0 6861 899;1099 2604 2672 10722 10722 EAVVQEPER 9 0 1 Unmodified _EAVVQEPER_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.7738 2 528.769645 1055.52474 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.881 1 24.881 24.381 25.381 0 0 0 0 1.651E-11 1 10564 138.1 88.68 1 6862 899;1099 2604 2672 10723 10723 EAVVQEPER 9 0 1 Unmodified _EAVVQEPER_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.7738 2 528.769645 1055.52474 84425.09 0.57025 0.00030153 -0.23925 -0.00012651 0.331 0.00017502 528.769576287848 533.773616735311 24.632 0.6083 24.632 24.403 25.012 1.9073E-06 112 28 6 0 0 0 1.8776E-05 2 10334 119.27 77.928 1 0.80035 0.91587 0 86516000 47259000 39256000 6863 899;1099 2604 2672 10724;10725 10724 EAVVQEPER 9 0 1 Unmodified _EAVVQEPER_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.7696 2 528.769645 1055.52474 NaN NaN NaN 0.066928 3.5389E-05 NaN NaN NaN NaN 27.618 0.41133 27.618 27.423 27.835 0 0 0 0 0.0021111 1 10859 82.452 60.366 1 NaN NaN 0 6449100 6449100 0 6864 899;1099 2604 2672 10726 10726 EAVVQEPER 9 0 1 Unmodified _EAVVQEPER_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.7737 2 528.769645 1055.52474 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.605 1 27.605 27.105 28.105 1.9073E-06 0 0 0 0.007221 1 10799 66.351 40.792 1 6865 899;1099 2604 2672 10727 10727 EAVVQEPER 9 0 1 Unmodified _EAVVQEPER_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.7737 2 528.769645 1055.52474 83545.1 0.10591 5.6002E-05 -0.054745 -2.8947E-05 0.051165 2.7054E-05 528.769642730522 533.77364800081 27.746 0.64989 27.746 27.369 28.019 1.9073E-06 112 28 6 0 0 0 0.00067697 2 10330 95.909 63.017 1 1.0499 0.86572 0 8311000 4046900 4264100 6866 899;1099 2604 2672 10728;10729 10728 EAVVWEAASMSQK 13 1 0 Oxidation (M) _EAVVWEAASM(ox)SQK_ EAVVWEAASM(1)SQK EAVVWEAASM(83.08)SQK 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.3461 2 726.345391 1450.67623 72166.95 0.67883 0.00049307 -0.20601 -0.00014964 0.47282 0.00034343 726.345913560722 730.353148100405 57.891 0.76485 57.891 57.61 58.375 -3.8147E-06 200 60 6 0 0 0 7.0049E-05 2 32690 83.081 77.215 1 1.1751 1.2191 0 12563000 5583500 6979800 6867 2038 2605 2673 10730;10731 10731 1875 EAVVWEAASMSQK 13 1 0 Oxidation (M) _EAVVWEAASM(ox)SQK_ EAVVWEAASM(1)SQK EAVVWEAASM(68.11)SQK 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.3468 2 726.345391 1450.67623 71502.8 0.59696 0.0004336 0.56363 0.00040939 1.1606 0.00084299 726.346124577153 730.353988579818 56.965 0.72062 56.965 56.678 57.399 0 192 54 5 0 0 0 0.00012076 2 32996 68.107 68.107 1 1.1146 1.131 0 12842000 6085600 6755900 6868 2038 2605 2673 10732;10733 10733 1875 EAVVWEAASMSQK 13 1 0 Oxidation (M) _EAVVWEAASM(ox)SQK_ EAVVWEAASM(1)SQK EAVVWEAASM(40.15)SQK 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.3456 2 726.345391 1450.67623 73388.09 0.73074 0.00053077 0.91536 0.00066487 1.6461 0.0011956 726.84718290605 730.853861931853 67 0.78839 67 66.665 67.453 0 217 54 6 0 0 0 0.0057115 1 34784 40.154 40.154 1 0.90345 0.74518 0 2355400 1383500 971950 6869 2038 2605 2673 10734 10734 1875 EAWEEEQEVAELLK 14 1 0 Unmodified _EAWEEEQEVAELLK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 856.4195 2 851.91215 1701.80975 NaN NaN NaN -0.33464 -0.00028508 NaN NaN NaN NaN 114.3 0.59673 114.3 113.99 114.59 7.6294E-06 0 0 0 1.0369E-07 1 72341 105.46 79.418 1 NaN NaN 0 19175000 0 19175000 6870 2103 2606 2674 10735 10735 EAWEEEQEVAELLK 14 1 0 Unmodified _EAWEEEQEVAELLK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.9213 2 851.91215 1701.80975 NaN NaN NaN -0.39748 -0.00033861 NaN NaN NaN NaN 113.77 0.57005 113.77 113.5 114.07 0 0 0 0 0.00030528 1 73719 80.979 63.17 1 NaN NaN 0 19786000 0 19786000 6871 2103 2606 2674 10736 10736 EAYGAVTQTVR 11 0 1 Unmodified _EAYGAVTQTVR_ 0 0 0 Q6FGV9;Q15126 Q6FGV9 Q6FGV9 PMVK Phosphomevalonate kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.8139 2 597.809302 1193.60405 NaN NaN NaN 0.26559 0.00015877 NaN NaN NaN NaN 39.996 0.31112 39.996 39.835 40.147 0 0 0 0 0.0019655 1 20815 79.148 61.908 1 NaN NaN 0 7811600 0 7811600 6872 1753 2607 2675 10737 10737 EAYGAVTQTVR 11 0 1 Unmodified _EAYGAVTQTVR_ 0 0 0 Q6FGV9;Q15126 Q6FGV9 Q6FGV9 PMVK Phosphomevalonate kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.8138 2 597.809302 1193.60405 NaN NaN NaN 0.65952 0.00039427 NaN NaN NaN NaN 38.927 0.40172 38.927 38.737 39.139 0 0 0 0 0.011406 1 20458 57.348 38.254 1 NaN NaN 0 9527900 0 9527900 6873 1753 2607 2675 10738 10738 EAYLVGLFEDTNLCAIHAK 19 1 0 Unmodified _EAYLVGLFEDTNLCAIHAK_ 0 0 0 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1082.5428 2 1082.5408 2163.06704 60231.06 0.35461 0.00038388 0.7981 0.00086398 1.1527 0.0012479 1083.04302236768 1086.54940939844 117.5 0.3844 117.5 117.31 117.7 0 81 22 5 0 0 0 0.00055843 2 77014 43.991 39.1 1 0.62498 0.64317 0 9559100 5863700 3695400 6874 1828 2608 2676 10739;10740 10739 EAYLVGLFEDTNLCAIHAK 19 1 0 Unmodified _EAYLVGLFEDTNLCAIHAK_ 0 0 0 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.3643 3 722.029623 2163.06704 71642.58 0.80792 0.00058334 -0.19406 -0.00014012 0.61386 0.00044322 722.363540454299 725.035341124037 129.86 0.41888 129.86 129.62 130.04 0 106 18 8 0 0 0 1.9509E-06 2 78603 68.243 64.056 1 0.8248 0.65073 0 5947100 3427900 2519300 6875 1828 2608 2676 10741;10742 10741 EAYPEEAYIADLDAK 15 1 0 Unmodified _EAYPEEAYIADLDAK_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.9018 2 849.398875 1696.7832 68657.54 1.1294 0.00095931 0.23034 0.00019565 1.3597 0.001155 849.398296116584 853.406772551558 96.999 0.57303 96.999 96.752 97.325 0 115 45 4 0 0 0 0.0005851 1 60506 54.343 54.343 1 1.5834 1.6535 0 10943000 4668800 6273700 6876 89 2609 2677 10743 10743 EAYPEEAYIADLDAK 15 1 0 Unmodified _EAYPEEAYIADLDAK_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.3977 2 849.398875 1696.7832 66122.64 0.89186 0.00075754 0.20244 0.00017195 1.0943 0.00092949 849.398823399155 853.406448440769 110.85 0.39825 110.85 110.66 111.05 0 63 16 6 0 0 0 0.013642 1 64171 33.685 33.685 1 1.0301 0.84148 0 2630900 1225600 1405300 6877 89 2609 2677 10744 10744 EAYPEEAYIADLDAK 15 1 0 Unmodified _EAYPEEAYIADLDAK_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 849.3993 2 849.398875 1696.7832 66587.59 0.74341 0.00063145 -0.083556 -7.0973E-05 0.65986 0.00056048 849.900489338937 853.405827369037 110.89 0.50644 110.89 110.64 111.15 7.6294E-06 80 25 4 0 0 0 0.0041447 1 63207 40.066 37.749 1 1.3542 1.0974 0 2613300 1219900 1393400 6878 89 2609 2677 10745 10745 ECADLWPR 8 0 1 Unmodified _ECADLWPR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.7439 2 523.739834 1045.46511 84128.37 0.3538 0.0001853 0.049643 2.6E-05 0.40344 0.0002113 523.739794306252 528.744052716979 63.304 1.2819 63.304 62.845 64.127 0 642 124 7 0 0 0 0.0038926 3 36349 95.352 88.713 1 0.61673 0.72065 0 201610000 121960000 79652000 6879 84 2610 2678 10746;10747;10748 10747 ECADLWPR 8 0 1 Unmodified _ECADLWPR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.744 2 523.739834 1045.46511 80053.56 0.32853 0.00017207 0.078322 4.102E-05 0.40685 0.00021309 523.739820515206 528.744150056443 62.019 1.61 62.019 61.613 63.223 0 666 147 8 0 0 0 0.0080668 2 36415 80.229 72.539 1 0.60935 0.70175 0 218210000 133080000 85125000 6880 84 2610 2678 10749;10750 10750 ECADLWPR 8 0 1 Unmodified _ECADLWPR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.7402 2 523.739834 1045.46511 80332.05 0.2225 0.00011653 0.11611 6.0813E-05 0.33861 0.00017734 523.739895690756 528.744013796576 72.377 2.0899 72.377 71.808 73.898 0 666 156 8 0 0 0 0.026448 2 38418 54.549 49.24 1 1.7132 1.4735 0 48204000 17641000 30563000 6881 84 2610 2678 10751;10752 10752 ECADLWPR 8 0 1 Unmodified _ECADLWPR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.7399 2 523.739834 1045.46511 80071.36 0.20876 0.00010934 -0.0073907 -3.8708E-06 0.20137 0.00010546 523.739833899811 528.743929865032 72.848 1.8527 72.848 72.278 74.131 7.6294E-06 663 143 8 0 0 0 0.011932 2 37843 68.787 68.787 1 1.7577 1.5332 0 43381000 16088000 27293000 6882 84 2610 2678 10753;10754 10754 ECDPDLCLTCGAADHWDSK 19 1 0 Unmodified _ECDPDLCLTCGAADHWDSK_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.6351 3 750.634727 2248.88235 71840.75 0.47677 0.00035788 -0.20405 -0.00015317 0.27272 0.00020471 750.968836518445 753.9743059697 77.062 0.46835 77.062 76.854 77.322 0 154 41 6 0 0 0 6.1768E-06 2 45542 61.767 61.767 1 1.0291 1.0105 0 8925700 4154600 4771100 6883 456 2611 2679 10755;10756 10756 ECDPDLCLTCGAADHWDSK 19 1 0 Unmodified _ECDPDLCLTCGAADHWDSK_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.3069 3 750.634727 2248.88235 71618.16 0.33229 0.00024943 0.10636 7.9836E-05 0.43865 0.00032927 750.634873429167 753.640810871059 76.133 0.39088 76.133 75.957 76.348 0 185 35 8 0 0 0 5.4379E-06 2 45887 64.2 64.2 1 0.84998 0.85381 0 15965000 9162600 6802200 6884 456 2611 2679 10757;10758 10757 ECDPDLCLTCGAADHWDSK 19 1 0 Unmodified _ECDPDLCLTCGAADHWDSK_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 753.6412 3 750.634727 2248.88235 69157.16 0.80769 0.00060628 -0.50733 -0.00038082 0.30036 0.00022546 750.968862567204 753.640272469148 88.22 0.58414 88.22 87.943 88.527 0 259 35 10 0 0 0 0.0026255 1 48636 27.904 27.904 1 2.0245 1.6178 0 9030500 2615600 6414900 6885 456 2611 2679 10759 10759 ECDPDLCLTCGAADHWDSK 19 1 0 Unmodified _ECDPDLCLTCGAADHWDSK_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.6411 3 750.634727 2248.88235 69249.38 0.42286 0.00031742 -0.076059 -5.7092E-05 0.34681 0.00026032 750.969137932835 753.64054233306 88.228 0.51065 88.228 87.989 88.5 -7.6294E-06 198 27 10 0 0 0 7.4497E-06 1 47803 59.469 59.469 1 2.0314 1.6601 0 8194500 2859700 5334700 6886 456 2611 2679 10760 10760 ECFVCTACR 9 0 1 Unmodified _ECFVCTACR_ 0 0 0 I0CE67;Q6I9R8;Q2XQU9;J3KNW4;A0A0A0MSG2;Q14192;Q53T40;Q2TSB7 I0CE67 I0CE67 FHL2;AAG11 Four and a half LIM domains protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.7468 2 601.741193 1201.46783 NaN NaN NaN 0.30188 0.00018166 NaN NaN NaN NaN 36.926 0.38293 36.926 36.68 37.063 0 0 0 0 0.0366 1 18750 51.346 47.411 1 NaN NaN 0 3286300 0 3286300 6887 478 2612 2680 10761 10761 ECFVCTACR 9 0 1 Unmodified _ECFVCTACR_ 0 0 0 I0CE67;Q6I9R8;Q2XQU9;J3KNW4;A0A0A0MSG2;Q14192;Q53T40;Q2TSB7 I0CE67 I0CE67 FHL2;AAG11 Four and a half LIM domains protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.7454 2 601.741193 1201.46783 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.976 1 35.976 35.476 36.476 0 0 0 0 0.013656 1 18416 60.118 53.383 1 6888 478 2612 2680 10762 10762 ECGQLLISENQK 12 1 0 Unmodified _ECGQLLISENQK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.8589 2 709.850841 1417.68713 72422.92 0.74289 0.00052734 0.013473 9.5636E-06 0.75636 0.0005369 709.850896712217 713.857982580337 50.636 0.46347 50.636 50.449 50.913 0 208 44 6 0 0 0 1.749E-12 2 27875 136.49 136.49 1 0.66952 0.75789 0 100900000 54175000 46723000 6889 528 2613 2681 10763;10764 10763 ECGQLLISENQK 12 1 0 Unmodified _ECGQLLISENQK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.8514 2 709.850841 1417.68713 72375.35 0.51021 0.00036218 0.030498 2.1649E-05 0.54071 0.00038382 709.850941512539 713.858013292905 49.442 0.59888 49.442 49.205 49.804 3.8147E-06 231 50 8 0 0 0 4.4475E-08 2 27715 141.89 141.89 1 0.66532 0.74332 0 90094000 51927000 38167000 6890 528 2613 2681 10765;10766 10766 ECGQLLISENQK 12 1 0 Unmodified _ECGQLLISENQK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.8503 2 709.850841 1417.68713 69905.28 0.71463 0.00050728 -0.10277 -7.2953E-05 0.61185 0.00043432 709.850815387306 713.857934729937 58.051 0.80588 58.051 57.808 58.614 0 338 61 10 0 0 0 0.05956 1 29396 39.625 39.625 1 1.011 0.81966 0 25257000 12716000 12541000 6891 528 2613 2681 10767 10767 ECGQLLISENQK 12 1 0 Unmodified _ECGQLLISENQK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.8587 2 709.850841 1417.68713 71767.95 0.52082 0.00036971 -0.017521 -1.2437E-05 0.5033 0.00035727 709.85091098674 713.858029377635 58.503 0.84429 58.503 58.215 59.059 0 383 66 10 0 0 0 9.881E-23 2 29049 156.48 156.48 1 0.95872 0.76958 0 18086000 9320100 8765700 6892 528 2613 2681 10768;10769 10769 ECLPLIIFLR 10 0 1 Unmodified _ECLPLIIFLR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.3749 2 637.370484 1272.72641 73034.3 0.86172 0.00054923 -0.17354 -0.00011061 0.68818 0.00043863 637.370416451326 642.374542688754 133.03 0.60977 133.03 132.74 133.35 0 152 23 9 0 0 0 0.00049098 2 86834 86.011 73.785 1 0.95586 0.97784 0 33663000 17019000 16644000 6893 824 2614 2682 10770;10771 10770 ECLPLIIFLR 10 0 1 Unmodified _ECLPLIIFLR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.3708 2 637.370484 1272.72641 74346.67 0.927 0.00059084 -0.18982 -0.00012098 0.73718 0.00046986 637.370332378828 642.374472025834 132.58 0.83606 132.58 132.24 133.08 0 290 46 9 0 0 0 0.00013321 2 88701 96.253 84.027 1 0.91886 1.0545 0 52082000 27249000 24834000 6894 824 2614 2682 10772;10773 10773 ECLQHELQTIR 11 0 1 Unmodified _ECLQHELQTIR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.2433 3 476.241759 1425.70345 90452.45 -0.21533 -0.00010255 0.1442 6.8674E-05 -0.071128 -3.3874E-05 476.241942296094 479.578012163452 53.022 0.31969 53.022 52.824 53.144 0 100 24 6 0 0 0 0.02898 1 29581 28.624 23.72 1 0.94089 0.96456 0 14413000 7044200 7368700 6895 1581 2615 2683 10774 10774 ECLSVWNIK 9 1 0 Unmodified _ECLSVWNIK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.791 2 574.792066 1147.56958 NaN NaN NaN -1.2758 -0.00073329 NaN NaN NaN NaN 88.098 0.31655 88.098 87.961 88.278 0 0 0 0 0.023452 1 53119 56.177 37.446 1 NaN NaN 0 4990000 4990000 0 6896 2042 2616 2684 10775 10775 ECLSVWNIK 9 1 0 Unmodified _ECLSVWNIK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.7992 2 574.792066 1147.56958 NaN NaN NaN -0.27911 -0.00016043 NaN NaN NaN NaN 100.72 0.42589 100.72 100.44 100.87 0 0 0 0 0.054179 1 56139 45.68 35.266 1 NaN NaN 0 1791900 0 1791900 6897 2042 2616 2684 10776 10776 ECPSDECGAGVFMASHFDR 19 0 1 Oxidation (M) _ECPSDECGAGVFM(ox)ASHFDR_ ECPSDECGAGVFM(1)ASHFDR ECPSDECGAGVFM(120.31)ASHFDR 0 1 0 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 Q5RKT7 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.293 3 729.955801 2186.84557 69399.99 0.45394 0.00033136 -0.33185 -0.00024224 0.12209 8.912E-05 730.290279446068 733.626278072517 64.497 1.0255 64.497 64.101 65.127 0 795 89 13 0 0 0 1.6488E-17 2 36988 120.31 120.31 1 1.2727 1.5059 0 324810000 143460000 181340000 6898 891 2617 2685 10777;10778 10778 699 ECPSDECGAGVFMASHFDR 19 0 1 Oxidation (M) _ECPSDECGAGVFM(ox)ASHFDR_ ECPSDECGAGVFM(1)ASHFDR ECPSDECGAGVFM(139.11)ASHFDR 0 1 0 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 Q5RKT7 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.6258 3 729.955801 2186.84557 69114.66 0.52879 0.00038599 -0.29669 -0.00021657 0.2321 0.00016942 730.290329171703 733.292109688727 63.152 0.92173 63.152 62.743 63.664 0 720 78 14 0 0 0 1.3047E-30 2 36967 139.11 139.11 1 1.3412 1.5521 0 274150000 114410000 159730000 6899 891 2617 2685 10779;10780 10780 699 ECPSDECGAGVFMASHFDR 19 0 1 Oxidation (M) _ECPSDECGAGVFM(ox)ASHFDR_ ECPSDECGAGVFM(1)ASHFDR ECPSDECGAGVFM(42.17)ASHFDR 0 1 0 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 Q5RKT7 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.2924 3 729.955801 2186.84557 69003.73 0.74756 0.00054568 -0.54165 -0.00039538 0.20591 0.00015031 730.290083282205 733.291926410878 74.164 0.9053 74.164 73.762 74.667 0 529 60 12 0 0 0 0.00010031 1 39209 42.172 42.172 1 0.63091 0.53353 0 30524000 18803000 11721000 6900 891 2617 2685 10781 10781 699 ECPSDECGAGVFMASHFDR 19 0 1 Oxidation (M) _ECPSDECGAGVFM(ox)ASHFDR_ ECPSDECGAGVFM(1)ASHFDR ECPSDECGAGVFM(52.19)ASHFDR 0 1 0 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 Q5RKT7 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.9563 3 729.955801 2186.84557 69283.75 0.53655 0.00039166 -0.42413 -0.0003096 0.11242 8.2064E-05 729.955923425456 733.29202276932 74.541 0.93092 74.541 74.244 75.175 0 447 56 13 0 0 0 9.4502E-06 1 38630 52.19 52.19 1 0.63811 0.5566 0 37438000 23065000 14373000 6901 891 2617 2685 10782 10782 699 ECPSDECGAGVFMASHFDR 19 0 1 Unmodified _ECPSDECGAGVFMASHFDR_ 0 0 0 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 Q5RKT7 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 724.6245 3 724.624163 2170.85066 70225.23 0.63575 0.00046068 -0.55362 -0.00040117 0.08213 5.9514E-05 724.958411228935 728.294513454034 90.261 0.80403 90.261 89.958 90.762 0 441 54 10 0 0 0 0.00067236 1 50094 35.159 35.149 1 1.1481 0.9411 0 16776000 8398100 8377500 6902 891 2617 2686 10783 10783 ECPSDECGAGVFMASHFDR 19 0 1 Unmodified _ECPSDECGAGVFMASHFDR_ 0 0 0 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 Q5RKT7 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.9589 3 724.624163 2170.85066 70377.41 0.4938 0.00035782 -0.54629 -0.00039585 -0.052492 -3.8037E-05 724.958513568586 727.96014351896 90.154 0.80376 90.154 89.844 90.648 0 412 52 11 0 0 0 0.032418 1 49099 16.716 16.691 1 1.0812 0.91867 0 19116000 8390900 10725000 6903 891 2617 2686 10784 10784 ECSFCEDPR 9 0 1 Unmodified _ECSFCEDPR_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.2283 2 600.22643 1198.43831 81637.59 0.93108 0.00055886 0.070015 4.2025E-05 1.0011 0.00060088 600.226354856532 605.230622788266 28.149 0.28963 28.149 28.015 28.305 1.9073E-06 62 21 4 0 0 0 0.010772 2 13174 58.981 55.046 1 0.68395 0.67927 0 8396600 4439300 3957400 6904 590 2618 2687 10785;10786 10785 ECSFCEDPR 9 0 1 Unmodified _ECSFCEDPR_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.2265 2 600.22643 1198.43831 79551.16 0.30509 0.00018312 0.037192 2.2324E-05 0.34228 0.00020545 600.226388585058 605.230789915355 27.592 0.3052 27.592 27.401 27.706 0 51 15 5 0 0 0 0.0018606 2 12833 79.906 75.972 1 0.56738 0.56247 0 15759000 9213600 6545500 6905 590 2618 2687 10787;10788 10787 ECSFCEDPR 9 0 1 Unmodified _ECSFCEDPR_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.2305 2 600.22643 1198.43831 78514.79 0.33187 0.0001992 0.05936 3.5629E-05 0.39123 0.00023483 600.22652270353 605.230710442292 32.069 0.41727 32.069 31.83 32.248 0 101 22 6 0 0 0 0.054467 1 13653 36.693 36.169 1 1.5453 1.3013 0 4606700 1765900 2840700 6906 590 2618 2687 10789 10789 ECSFCEDPR 9 0 1 Unmodified _ECSFCEDPR_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.2307 2 600.22643 1198.43831 79300.7 0.57095 0.0003427 -0.32714 -0.00019636 0.24382 0.00014635 600.226146529084 605.230570973121 32.214 0.45934 32.214 32.003 32.463 0 113 23 8 0 0 0 0.051395 1 13278 37.476 32.11 1 1.5831 1.3489 0 3183300 1540300 1643000 6907 590 2618 2687 10790 10790 ECSVTSDLDFPTQVIPLK 18 1 0 Unmodified _ECSVTSDLDFPTQVIPLK_ 0 0 0 A0A090N8E9;Q15910;B7Z8K5;Q6R125;G3XAL2;Q59H64 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1029.0239 2 1025.01408 2048.01361 60689.61 0.56439 0.00057851 -0.24337 -0.00024946 0.32102 0.00032905 1025.51549474818 1029.52280552982 121.99 0.41712 121.99 121.8 122.21 7.6294E-06 166 28 8 0 0 0 0.0010165 1 78845 50.222 50.222 1 0.97273 1.0151 0 16774000 8513700 8260400 6908 456 2619 2688 10791 10791 ECSVTSDLDFPTQVIPLK 18 1 0 Unmodified _ECSVTSDLDFPTQVIPLK_ 0 0 0 A0A090N8E9;Q15910;B7Z8K5;Q6R125;G3XAL2;Q59H64 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1029.0212 2 1025.01408 2048.01361 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.53 1 121.53 121.03 122.03 0 0 0 0 8.177E-10 1 80481 101.39 93.258 1 6909 456 2619 2688 10792 10792 ECSVTSDLDFPTQVIPLK 18 1 0 Unmodified _ECSVTSDLDFPTQVIPLK_ 0 0 0 A0A090N8E9;Q15910;B7Z8K5;Q6R125;G3XAL2;Q59H64 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1029.5229 2 1025.01408 2048.01361 60372.41 0.99927 0.0010243 -0.10086 -0.00010338 0.89842 0.00092089 1025.51562008802 1029.52247012469 134.29 0.18588 134.29 134.18 134.37 0 37 8 5 0 0 0 3.8178E-05 1 81950 77.912 77.912 1 1.8222 1.4263 0 16466000 5746500 10719000 6910 456 2619 2688 10793 10793 ECSVTSDLDFPTQVIPLK 18 1 0 Unmodified _ECSVTSDLDFPTQVIPLK_ 0 0 0 A0A090N8E9;Q15910;B7Z8K5;Q6R125;G3XAL2;Q59H64 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1029.0209 2 1025.01408 2048.01361 60242.13 0.89912 0.00092161 -0.39368 -0.00040353 0.50544 0.00051808 1025.51494321679 1029.02107412299 134.17 0.24069 134.17 134.04 134.28 0 77 13 8 0 0 0 0.0091096 1 80910 40.025 40.025 1 1.7606 1.4114 0 19458000 6837500 12621000 6911 456 2619 2688 10794 10794 ECVAPHMADIGSVTSSASGPAQSVAK 26 1 0 Oxidation (M) _ECVAPHM(ox)ADIGSVTSSASGPAQSVAK_ ECVAPHM(1)ADIGSVTSSASGPAQSVAK ECVAPHM(65.21)ADIGSVTSSASGPAQSVAK 0 1 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 858.7399 3 858.40386 2572.18975 70216.3 0.71484 0.00061362 -0.75754 -0.00065027 -0.042699 -3.6653E-05 858.737756774534 861.40759810763 62.948 0.38614 62.948 62.783 63.169 0 85 36 5 0 0 0 1.2836E-12 1 36161 65.213 62.637 1 0.95381 0.99404 0 11679000 6670100 5008900 6912 907 2620 2689 10795 10795 729 EDAAGTSGLGELNSR 15 0 1 Unmodified _EDAAGTSGLGELNSR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.8557 2 738.849884 1475.68521 71371.7 0.48053 0.00035504 -0.17223 -0.00012725 0.3083 0.00022779 738.849838544512 743.854147634173 50.091 0.5779 50.091 49.871 50.449 -3.8147E-06 293 54 8 0 0 0 5.0188E-06 2 27507 96.745 88.819 1 1.2339 1.4137 0 132620000 50197000 82425000 6913 1820 2621 2690 10796;10797 10796 EDAAGTSGLGELNSR 15 0 1 Unmodified _EDAAGTSGLGELNSR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.8548 2 738.849884 1475.68521 70076.04 0.57565 0.00042532 -0.14654 -0.00010827 0.42911 0.00031704 738.849686012033 743.854118797789 49.048 0.89714 49.048 48.691 49.588 3.8147E-06 376 75 7 0 0 0 1.6613E-15 1 27370 134.08 124.39 1 1.1581 1.3214 0 93351000 33670000 59681000 6914 1820 2621 2690 10798 10798 EDAAGTSGLGELNSR 15 0 1 Unmodified _EDAAGTSGLGELNSR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.8547 2 738.849884 1475.68521 69119.95 0.75291 0.00055629 -0.22859 -0.00016889 0.52432 0.00038739 738.849777590782 743.853943878714 57.877 0.90139 57.877 57.489 58.39 0 430 67 10 0 0 0 1.8363E-10 2 29285 120.53 114.43 1 2.1637 1.8548 0 41507000 13549000 27958000 6915 1820 2621 2690 10799;10800 10800 EDAAGTSGLGELNSR 15 0 1 Unmodified _EDAAGTSGLGELNSR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 743.8559 2 738.849884 1475.68521 70158.68 0.5924 0.00043769 -0.45493 -0.00033613 0.13747 0.00010157 738.849500348972 743.853906011733 58.587 1.118 58.587 57.971 59.089 0 482 85 11 0 0 0 0.0002241 3 28942 70.089 70.089 1 2.0973 1.8295 0 31158000 10654000 20504000 6916 1820 2621 2690 10801;10802;10803 10801 EDAGDNDDTEGAIGVR 16 0 1 Unmodified _EDAGDNDDTEGAIGVR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.355 2 817.350445 1632.68634 67466.42 0.56893 0.00046501 0.22714 0.00018565 0.79607 0.00065066 817.350702633289 822.354643291615 40.086 0.63945 40.086 39.73 40.37 0 311 52 9 0 0 0 1.907E-44 2 20793 164.9 164.9 1 1.0504 1.1731 0 86225000 43426000 42800000 6917 313 2622 2691 10804;10805 10805 EDAGDNDDTEGAIGVR 16 0 1 Unmodified _EDAGDNDDTEGAIGVR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.3551 2 817.350445 1632.68634 67538.55 0.68531 0.00056014 -0.045967 -3.7571E-05 0.63935 0.00052257 817.350371398962 822.354465795704 39.143 0.62075 39.143 38.827 39.447 0 308 53 8 0 0 0 6.1034E-25 2 20556 146.36 146.36 1 1.0584 1.2139 0 81483000 40254000 41230000 6918 313 2622 2691 10806;10807 10807 EDAGDNDDTEGAIGVR 16 0 1 Unmodified _EDAGDNDDTEGAIGVR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 822.3551 2 817.350445 1632.68634 66507.73 0.54621 0.00044644 0.16599 0.00013567 0.71219 0.00058211 817.350623083474 822.354793125662 45.983 0.76168 45.983 45.685 46.446 0 401 58 10 0 0 0 0.00015523 1 21991 72.089 72.089 1 1.2257 1.0134 0 19433000 8379700 11053000 6919 313 2622 2691 10808 10808 EDAGDNDDTEGAIGVR 16 0 1 Unmodified _EDAGDNDDTEGAIGVR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 822.355 2 817.350445 1632.68634 66859.49 0.46445 0.00037961 0.083473 6.8227E-05 0.54792 0.00044784 817.350495877992 822.354665807084 46.326 0.97427 46.326 45.929 46.903 0 438 63 9 0 0 0 0.0019975 2 21600 42.789 42.789 1 1.2697 1.0266 0 11566000 5017600 6548600 6920 313 2622 2691 10809;10810 10809 EDALDYLIGGLYHEK 15 1 0 Unmodified _EDALDYLIGGLYHEK_ 0 0 0 A0A024R667;Q96FK6 A0A024R667 A0A024R667 C14orf150;WDR89 WD repeat-containing protein 89 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.4305 2 868.430509 1734.84647 67700.17 0.67704 0.00058797 -0.2051 -0.00017811 0.47195 0.00040986 868.430449817667 872.43653652153 121.83 0.424 121.83 121.59 122.01 0 102 29 6 0 0 0 0.0031794 1 80602 42.809 33.621 1 0.82886 0.83083 0 5559400 3076800 2482600 6921 198 2623 2692 10811 10811 EDALELTEK 9 1 0 Unmodified _EDALELTEK_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.2709 2 524.263862 1046.51317 83318.81 0.18166 9.5237E-05 0.35758 0.00018746 0.53923 0.0002827 524.264093525832 528.271135071835 50.922 0.56438 50.922 50.646 51.21 0 269 51 9 0 0 0 1.885E-05 2 28162 119.21 83.084 1 1.1065 1.2422 0 67894000 30194000 37700000 6922 790 2624 2693 10812;10813 10812 EDALELTEK 9 1 0 Unmodified _EDALELTEK_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.2643 2 524.263862 1046.51317 82701.16 0.70764 0.00037099 0.064041 3.3575E-05 0.77168 0.00040456 524.263717258642 528.270857181609 49.696 0.44357 49.696 49.572 50.015 0 202 36 7 0 0 0 0.00034217 2 28000 101.43 70.202 1 1.0868 1.2232 0 70695000 34286000 36409000 6923 790 2624 2693 10814;10815 10814 EDALLYQSK 9 1 0 Unmodified _EDALLYQSK_ 0 0 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.777 2 533.774396 1065.53424 82063.72 0.52845 0.00028207 0.80185 0.00042801 1.3303 0.00071008 533.774837415365 537.781973710838 44.1 0.52114 44.1 43.848 44.369 -3.8147E-06 122 47 4 0 0 0 0.00087207 3 23644 93.178 67.86 1 0.86949 0.85332 0 20458000 9607800 10850000 6924 1590 2625 2694 10816;10817;10818 10818 EDAMAMVDHCLK 12 1 0 2 Oxidation (M) _EDAM(ox)AM(ox)VDHCLK_ EDAM(1)AM(1)VDHCLK EDAM(57.17)AM(57.17)VDHCLK 0 2 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;Q9H4N1 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.3023 2 726.301812 1450.58907 73976.59 0.47436 0.00034453 -0.0019175 -1.3927E-06 0.47244 0.00034313 726.302112778482 730.30906252766 25.8 0.22963 25.8 25.654 25.883 0 46 12 6 0 0 0 0.0035759 1 11351 57.174 52.875 1 2.5849 2.556 0 9423300 2946100 6477200 6925 542 2626 2695 10819 10819 397;398 EDAMAMVDHCLK 12 1 0 2 Oxidation (M) _EDAM(ox)AM(ox)VDHCLK_ EDAM(1)AM(1)VDHCLK EDAM(76.23)AM(76.23)VDHCLK 0 2 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;Q9H4N1 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.309 2 726.301812 1450.58907 74423.66 1.0889 0.00079087 0.27218 0.00019769 1.3611 0.00098855 726.30207403834 730.309086600624 25.436 0.21283 25.436 25.304 25.517 0 23 8 4 0 0 0 0.00022398 1 11038 76.228 71.615 1 2.3789 2.4208 0 12464000 3249500 9214300 6926 542 2626 2695 10820 10820 397;398 EDCFFYSLVFDPVQK 15 1 0 Unmodified _EDCFFYSLVFDPVQK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 951.4479 2 947.44002 1892.86549 64550.83 1.1028 0.0010448 0.041219 3.9053E-05 1.144 0.0010839 947.941473935143 951.447051311432 129.87 0.82176 129.87 129.6 130.42 0 181 47 7 0 0 0 8.8784E-06 2 84615 93.839 88.56 1 0.80305 0.7971 0 8150600 4581800 3568800 6927 168 2627 2696 10821;10822 10822 EDCFFYSLVFDPVQK 15 1 0 Unmodified _EDCFFYSLVFDPVQK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.4395 2 947.44002 1892.86549 64115.35 0.66852 0.00063339 -0.015909 -1.5073E-05 0.65261 0.00061831 947.94152823223 951.446875626159 129.55 0.85443 129.55 129.21 130.06 0 239 53 6 0 0 0 1.1405E-05 2 86411 91.937 86.553 1 0.77895 0.77791 0 15106000 8980600 6125700 6928 168 2627 2696 10823;10824 10823 EDCSPDEFIDVIVGNR 16 0 1 Unmodified _EDCSPDEFIDVIVGNR_ 0 0 0 A8MZF9;P55039;Q59FW9 A8MZF9 A8MZF9 DRG2 Developmentally-regulated GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 938.4288 2 932.922723 1863.83089 66941.95 0.58753 0.00054812 -0.01844 -1.7204E-05 0.56909 0.00053091 932.923310211355 937.927040026329 122.11 0.4395 122.11 121.9 122.34 7.6294E-06 65 29 5 0 0 0 0.0035069 1 79000 36.847 36.847 1 2.6464 2.8224 0 3593700 1196400 2397300 6929 801 2628 2697 10825 10825 EDCSPDEFIDVIVGNR 16 0 1 Unmodified _EDCSPDEFIDVIVGNR_ 0 0 0 A8MZF9;P55039;Q59FW9 A8MZF9 A8MZF9 DRG2 Developmentally-regulated GTP-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 937.9292 2 932.922723 1863.83089 NaN NaN NaN 0.81144 0.00075701 NaN NaN NaN NaN 121.65 0.35056 121.65 121.49 121.84 -7.6294E-06 0 0 0 0.021539 1 80538 41.052 32.323 1 NaN NaN 0 2282300 0 2282300 6930 801 2628 2697 10826 10826 EDDALWPPPDR 11 0 1 Unmodified _EDDALWPPPDR_ 0 0 0 F5H6P7;A0A023T6R1;P61326;Q96A72;F5H3U9;F5H6N1 F5H6P7 F5H6P7 MAGOHB;FLJ10292;MAGOH Protein mago nashi homolog;Protein mago nashi homolog 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.8096 2 655.804217 1309.59388 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.527 1 76.527 76.027 77.027 0 0 0 0 0.038787 1 46198 45.022 31.431 1 6931 3 2629 2698 10827 10827 EDEAPILEQR 10 0 1 Unmodified _EDEAPILEQR_ 0 0 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.3036 2 600.298767 1198.58298 78939.7 0.5711 0.00034283 0.326 0.0001957 0.8971 0.00053853 600.299233122574 605.302816100409 50.553 0.46262 50.553 50.331 50.794 0 140 44 5 0 0 0 0.00050021 1 27937 85.862 79.827 1 0.87154 0.9008 0 37199000 19720000 17479000 6932 681 2630 2699 10828 10828 EDEAPILEQR 10 0 1 Unmodified _EDEAPILEQR_ 0 0 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.3035 2 600.298767 1198.58298 78107.01 0.47868 0.00028735 0.16143 9.6909E-05 0.64012 0.00038426 600.299076614049 605.302880025497 49.417 0.36494 49.417 49.19 49.555 3.8147E-06 149 31 6 0 0 0 2.6362E-06 1 27784 110.76 102.83 1 0.76247 0.83229 0 29924000 16814000 13110000 6933 681 2630 2699 10829 10829 EDEAPILEQR 10 0 1 Unmodified _EDEAPILEQR_ 0 0 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.3044 2 600.298767 1198.58298 77568.11 0.55299 0.00033196 0.44577 0.0002676 0.99876 0.00059956 600.298976363345 605.302853175081 58.178 0.49869 58.178 57.915 58.414 -3.8147E-06 155 35 6 0 0 0 0.010146 2 28828 53.751 51.943 1 1.7917 1.6107 0 2256700 952890 1303900 6934 681 2630 2699 10830;10831 10830 EDEEEDDDVVAPKPPIEPEEEK 22 2 0 Unmodified _EDEEEDDDVVAPKPPIEPEEEK_ 0 0 1 E7EQU2;E7ESD3;E7EMU4;E7EV09;E7EQL5;Q59GU5;A0A140VKE9;Q13409 E7EQU2 E7EQU2 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.0582 3 846.713299 2537.11807 65069.48 0.40728 0.00034485 0.88494 0.00074929 1.2922 0.0010941 847.047357824633 852.057578327284 72.337 0.43832 72.337 72.106 72.544 0 121 33 5 0 0 0 0.001025 2 42210 31.917 28.994 1 2.325 2.7278 0 13442000 3603200 9839100 6935 625 2631 2700 10832;10833 10833 EDEEEDEPVVIK 12 1 0 Unmodified _EDEEEDEPVVIK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.8306 2 715.830294 1429.64603 71788.22 0.63542 0.00045485 0.73 0.00052256 1.3654 0.00097741 715.83055528743 719.837726615337 55.167 0.82087 55.167 54.777 55.597 0 313 77 7 0 0 0 3.1305E-13 1 30887 135.87 122.1 1 0.59751 0.65244 0 50693000 29615000 21077000 6936 1837 2632 2701 10834 10834 EDEEEDEPVVIK 12 1 0 Unmodified _EDEEEDEPVVIK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.8381 2 715.830294 1429.64603 NaN NaN NaN 0.15815 0.00011321 NaN NaN NaN NaN 54.235 0.6992 54.235 53.87 54.57 0 0 0 0 3.8679E-13 1 31006 121.73 110.9 1 NaN NaN 0 31389000 0 31389000 6937 1837 2632 2701 10835 10835 EDEEEDEPVVIK 12 1 0 Unmodified _EDEEEDEPVVIK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.833 2 715.830294 1429.64603 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.463 1 54.463 53.963 54.963 0 0 0 0 3.5917E-47 1 31132 174.02 116.06 1 6938 1837 2632 2701 10836 10836 EDEEEDEPVVIK 12 1 0 Unmodified _EDEEEDEPVVIK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 719.8381 2 715.830294 1429.64603 71196.73 0.40776 0.00029188 0.29191 0.00020896 0.69967 0.00050084 715.830453390662 719.837716574076 63.67 0.77386 63.67 63.375 64.149 0 340 67 7 0 0 0 1.1823E-05 2 32736 107.21 107.21 1 1.3682 1.082 0 10539000 3787400 6751400 6939 1837 2632 2701 10837;10838 10838 EDEEEDEPVVIK 12 1 0 Unmodified _EDEEEDEPVVIK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.8369 2 715.830294 1429.64603 71857.24 0.39018 0.0002793 0.29362 0.00021018 0.68379 0.00048948 715.830388811043 719.837619716431 64.351 1.0366 64.351 63.956 64.993 0 357 86 7 0 0 0 1.1823E-05 2 32351 107.21 107.21 1 1.4015 1.15 0 9046600 3362000 5684600 6940 1837 2632 2701 10839;10840 10840 EDEISLEDLIER 12 0 1 Unmodified _EDEISLEDLIER_ 0 0 0 B7Z592;Q8WU90 B7Z592 B7Z592 ZC3H15 Zinc finger CCCH domain-containing protein 15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.8593 2 730.859386 1459.70422 80416.91 0.63669 0.00046533 0.10231 7.4773E-05 0.739 0.0005401 730.859330243218 735.863591253348 115.38 0.50908 115.38 115.1 115.61 0 104 33 5 0 0 0 0.0003692 2 73462 72.006 72.006 1 1.7063 1.7384 0 6963700 2484900 4478800 6941 1093 2633 2702 10841;10842 10841 EDEQQQALQDIASR 14 0 1 Unmodified _EDEQQQALQDIASR_ 0 0 0 P49916;B7Z6I3;K7ERZ5;K7EQB6 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.8873 2 815.886997 1629.75944 67479.45 0.48312 0.00039417 -0.50058 -0.00040841 -0.017456 -1.4242E-05 815.887126523103 820.891192795183 65.311 0.90494 65.311 64.906 65.811 0 356 81 8 0 0 0 7.5557E-84 2 37507 223.08 213.65 1 0.54411 0.55972 0 25068000 14619000 10449000 6942 1589 2634 2703 10843;10844 10844 EDEQQQALQDIASR 14 0 1 Unmodified _EDEQQQALQDIASR_ 0 0 0 P49916;B7Z6I3;K7ERZ5;K7EQB6 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.8874 2 815.886997 1629.75944 66797.03 0.60498 0.00049359 -0.53455 -0.00043614 0.070421 5.7455E-05 815.887067266124 820.891029114269 64.227 0.75672 64.227 63.92 64.677 0 353 70 8 0 0 0 3.4817E-98 3 37722 231.17 221.73 1 0.53734 0.58727 0 30352000 22015000 8337000 6943 1589 2634 2703 10845;10846;10847 10846 EDEQQQALQDIASR 14 0 1 Unmodified _EDEQQQALQDIASR_ 0 0 0 P49916;B7Z6I3;K7ERZ5;K7EQB6 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.891 2 815.886997 1629.75944 67143.72 0.67771 0.00055293 -0.24163 -0.00019714 0.43608 0.00035579 816.388472996872 820.890918546633 75.383 0.85699 75.383 75.085 75.942 0 309 60 8 0 0 0 0.011261 2 39989 36.417 34.749 1 0.58523 0.50328 0 7698200 5126200 2572000 6944 1589 2634 2703 10848;10849 10848 EDEQQQALQDIASR 14 0 1 Unmodified _EDEQQQALQDIASR_ 0 0 0 P49916;B7Z6I3;K7ERZ5;K7EQB6 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 816.389 2 815.886997 1629.75944 66242.77 0.52815 0.00043091 -0.055398 -4.5199E-05 0.47275 0.00038571 815.887098757228 820.890867930486 75.932 0.70847 75.932 75.631 76.34 0 264 46 8 0 0 0 0.0014718 2 39531 53.448 50.596 1 0.5731 0.47735 0 6995800 4644300 2351500 6945 1589 2634 2703 10850;10851 10851 EDFELQLNK 9 1 0 Unmodified _EDFELQLNK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.2852 2 568.285128 1134.5557 82177.85 0.69624 0.00039566 0.14373 8.1681E-05 0.83997 0.00047734 568.285302578723 572.292480505269 76.033 1.3065 76.033 75.547 76.854 0 257 109 5 0 0 0 0.0028813 1 44748 73.208 41.066 1 1.1501 1.2144 0 30982000 15657000 15324000 6946 2147 2635 2704 10852 10852 EDFELQLNK 9 1 0 Unmodified _EDFELQLNK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.285 2 568.285128 1134.5557 82291.05 0.48762 0.00027711 0.23898 0.00013581 0.7266 0.00041292 568.285261301437 572.292395224635 75.008 0.82517 75.008 74.799 75.624 0 314 73 6 0 0 0 0.0015079 1 45153 84.498 49.142 1 1.1943 1.2012 0 27193000 13034000 14159000 6947 2147 2635 2704 10853 10853 EDFELQLNK 9 1 0 Unmodified _EDFELQLNK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.2926 2 568.285128 1134.5557 82989.59 0.4503 0.0002559 -0.24552 -0.00013952 0.20479 0.00011638 568.285263388972 572.292288534864 86.664 0.5948 86.664 86.404 86.999 0 125 35 6 0 0 0 0.0011206 2 47582 89.698 58.469 1 1.7735 1.404 0 4970300 1912800 3057500 6948 2147 2635 2704 10854;10855 10855 EDFELQLNK 9 1 0 Unmodified _EDFELQLNK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.2927 2 568.285128 1134.5557 88051.91 0.47978 0.00027265 0.012534 7.1228E-06 0.49232 0.00027978 568.285337868546 572.292352779185 86.818 0.58848 86.818 86.587 87.176 0 134 37 5 0 0 0 0.016329 1 46816 53.968 34.874 1 2.2648 1.84 0 2907000 955690 1951300 6949 2147 2635 2704 10856 10856 EDFHSYLPIIDPILSK 16 1 0 Unmodified _EDFHSYLPIIDPILSK_ 0 0 0 Q8IZT6;B3KWI2 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.674 3 629.668132 1885.98257 78141.45 0.75465 0.00047518 -0.2713 -0.00017083 0.48335 0.00030435 629.667886660799 632.339433124099 123.69 0.44786 123.69 123.42 123.87 0 130 31 6 0 0 0 0.00022801 3 80217 48.177 48.177 1 0.8297 0.8425 0 6189300 3669400 2519800 6950 1902 2636 2705 10857;10858;10859 10858 EDFHSYLPIIDPILSK 16 1 0 Unmodified _EDFHSYLPIIDPILSK_ 0 0 0 Q8IZT6;B3KWI2 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.6738 3 629.668132 1885.98257 78500.45 1.1297 0.00071133 -0.26704 -0.00016815 0.86265 0.00054319 630.002404119102 632.339369632612 123.1 0.44169 123.1 122.88 123.32 -7.6294E-06 137 32 6 0 0 0 0.00054285 2 81677 43.791 40.071 1 0.93173 0.95023 0 9261000 4319900 4941100 6951 1902 2636 2705 10860;10861 10861 EDFVLSITGK 10 1 0 Unmodified _EDFVLSITGK_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.8069 2 554.797872 1107.58119 NaN NaN NaN 2.2706 0.0012597 NaN NaN NaN NaN 96.403 0.67569 96.403 96.057 96.733 0 0 0 0 0.012842 1 58640 60.398 6.6468 1 NaN NaN 0 9837000 0 9837000 6952 1091 2637 2706 10862 10862 EDFVLSITGK 10 1 0 Unmodified _EDFVLSITGK_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.8067 2 554.797872 1107.58119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.455 1 95.455 94.955 95.955 0 0 0 0 0.023512 1 59431 52.725 0.14672 1 6953 1091 2637 2706 10863 10863 EDFVLSITGK 10 1 0 Unmodified _EDFVLSITGK_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.8073 2 554.797872 1107.58119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.506 1 95.506 95.006 96.006 7.6294E-06 0 0 0 0.00056044 1 59470 70.056 6.8404 1 6954 1091 2637 2706 10864 10864 EDFVLSITGK 10 1 0 Unmodified _EDFVLSITGK_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.8057 2 554.797872 1107.58119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.98 1 108.98 108.48 109.48 0 0 0 0 0.036911 1 61791 48.091 5.9005 1 6955 1091 2637 2706 10865 10865 EDFVLTVTGK 10 1 0 Unmodified _EDFVLTVTGK_ 0 0 0 A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;U3KPY9;A0A087WXP2;Q5W0Y9;A0A0S2Z4H3;A0A1B0GVN4;A0A1B0GTC1;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4 A0A1B0GW37;B1AKN6 B1AKN6 NFIB;NFIA Nuclear factor 1;Nuclear factor 1 B-type;Nuclear factor 1 A-type ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.7974 2 554.797872 1107.58119 NaN NaN NaN -0.87407 -0.00048493 NaN NaN NaN NaN 85.297 0.41006 85.297 85.07 85.48 0 0 0 0 0.0023914 1 51151 80.755 6.3787 1 NaN NaN 0 19131000 19131000 0 6956 816;473 2638 2707 10866 10866 EDFVLTVTGK 10 1 0 Unmodified _EDFVLTVTGK_ 0 0 0 A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;U3KPY9;A0A087WXP2;Q5W0Y9;A0A0S2Z4H3;A0A1B0GVN4;A0A1B0GTC1;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4 A0A1B0GW37;B1AKN6 B1AKN6 NFIB;NFIA Nuclear factor 1;Nuclear factor 1 B-type;Nuclear factor 1 A-type MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.8046 2 554.797872 1107.58119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.161 1 85.161 84.661 85.661 -7.6294E-06 0 0 0 0.00040024 1 51124 74.165 5.3189 1 6957 816;473 2638 2707 10867 10867 EDFVLTVTGK 10 1 0 Unmodified _EDFVLTVTGK_ 0 0 0 A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;U3KPY9;A0A087WXP2;Q5W0Y9;A0A0S2Z4H3;A0A1B0GVN4;A0A1B0GTC1;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4 A0A1B0GW37;B1AKN6 B1AKN6 NFIB;NFIA Nuclear factor 1;Nuclear factor 1 B-type;Nuclear factor 1 A-type ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.7979 2 554.797872 1107.58119 NaN NaN NaN 0.35387 0.00019632 NaN NaN NaN NaN 109.05 0.60887 109.05 108.83 109.43 0 0 0 0 0.016683 1 61792 56.432 2.6804 1 NaN NaN 0 1724000 1724000 0 6958 816;473 2638 2707 10868 10868 EDGAISTIVLR 11 0 1 Unmodified _EDGAISTIVLR_ 0 0 0 Q7Z759;Q53HU0;P50990 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.3315 2 587.327328 1172.6401 NaN NaN NaN -0.36249 -0.0002129 NaN NaN NaN NaN 85.278 0.52425 85.278 85.02 85.544 0 0 0 0 0.00049652 2 51097 90.15 67.913 1 NaN NaN 0 27020000 0 27020000 6959 1592 2639 2708 10869;10870 10869 EDGAISTIVLR 11 0 1 Unmodified _EDGAISTIVLR_ 0 0 0 Q7Z759;Q53HU0;P50990 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.3316 2 587.327328 1172.6401 NaN NaN NaN -0.54808 -0.0003219 NaN NaN NaN NaN 84.284 0.50993 84.284 84.059 84.569 0 0 0 0 5.7494E-16 1 51657 132.01 97.824 1 NaN NaN 0 25478000 0 25478000 6960 1592 2639 2708 10871 10871 EDGAISTIVLR 11 0 1 Unmodified _EDGAISTIVLR_ 0 0 0 Q7Z759;Q53HU0;P50990 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.3322 2 587.327328 1172.6401 81365.68 0.36387 0.00021371 -0.56592 -0.00033238 -0.20206 -0.00011867 587.327611332529 592.331486218023 97.154 0.50703 97.154 96.885 97.392 -7.6294E-06 91 24 5 0 0 0 0.032727 1 53808 37.508 30.028 1 1.8475 1.6516 0 1973000 663910 1309100 6961 1592 2639 2708 10872 10872 EDGELNLMK 9 1 0 Oxidation (M) _EDGELNLM(ox)K_ EDGELNLM(1)K EDGELNLM(152.47)K 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.7516 2 532.750064 1063.48558 82615.15 0.59917 0.00031921 0.44051 0.00023468 1.0397 0.00055389 532.750171880731 536.757335115403 36.22 0.84169 36.22 35.879 36.72 0 368 79 6 0 0 0 6.6197E-12 2 18234 152.47 79.681 1 1.0297 1.1657 0 88840000 47143000 41697000 6962 2148 2640 2709 10873;10874 10874 1988 EDGELNLMK 9 1 0 Oxidation (M) _EDGELNLM(ox)K_ EDGELNLM(1)K EDGELNLM(149.4)K 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.7504 2 532.750064 1063.48558 82259.42 1.3358 0.00071166 0.79222 0.00042206 2.128 0.0011337 532.750351411989 536.75752498255 35.304 0.79871 35.304 35.083 35.882 0 330 70 6 0 0 0 5.147E-09 2 17963 149.4 86.936 1 1.0552 1.183 0 79347000 38316000 41031000 6963 2148 2640 2709 10875;10876 10876 1988 EDGELNLMK 9 1 0 Oxidation (M) _EDGELNLM(ox)K_ EDGELNLM(1)K EDGELNLM(53.77)K 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.7576 2 532.750064 1063.48558 83143.59 0.32011 0.00017054 0.39081 0.00020821 0.71093 0.00037875 532.750166170052 536.757256250719 41.106 0.72448 41.106 40.748 41.472 0 283 56 7 0 0 0 0.0080146 1 19024 53.775 34.796 1 0.62505 0.50127 0 8237400 4736100 3501200 6964 2148 2640 2709 10877 10877 1988 EDGELNLMKK 10 2 0 Oxidation (M) _EDGELNLM(ox)KK_ EDGELNLM(1)KK EDGELNLM(65.47)KK 0 1 1 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.7981 2 596.797546 1191.58054 79129.77 0.73664 0.00043963 0.31649 0.00018888 1.0531 0.00062851 596.797883678537 604.811658105844 23.861 0.52587 23.861 23.599 24.125 0 69 25 6 0 0 0 0.0074563 1 9725 65.465 45.051 1 1.3702 1.6057 0 13141000 4982100 8159200 6965 2148 2641 2710 10878 10878 1988 EDGELNLMKK 10 2 0 Oxidation (M) _EDGELNLM(ox)KK_ EDGELNLM(1)KK EDGELNLM(95.61)KK 0 1 1 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.7982 2 596.797546 1191.58054 80518.34 0.51538 0.00030758 0.074287 4.4335E-05 0.58967 0.00035191 596.797698985125 604.811822751764 23.603 0.47898 23.603 23.246 23.725 1.9073E-06 52 20 5 0 0 0 0.00035305 1 9401 95.605 65.258 1 0.91475 1.0433 0 11721000 5452500 6268800 6966 2148 2641 2710 10879 10879 1988 EDGLAQQQTQLNLR 14 0 1 Unmodified _EDGLAQQQTQLNLR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.4158 2 807.415725 1612.8169 NaN NaN NaN -0.57155 -0.00046147 NaN NaN NaN NaN 64.97 0.58916 64.97 64.622 65.212 0 0 0 0 3.5041E-06 1 37251 98.04 77.753 1 NaN NaN 0 6918900 6918900 0 6967 587 2642 2711 10880 10880 EDGLAQQQTQLNLR 14 0 1 Unmodified _EDGLAQQQTQLNLR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.416 2 807.415725 1612.8169 69697.78 0.49179 0.00039708 -0.33899 -0.00027371 0.1528 0.00012337 807.415482024788 812.420061300811 63.906 0.60275 63.906 63.543 64.145 -3.8147E-06 241 55 6 0 0 0 2.1336E-05 2 37465 97.456 97.456 1 1.8561 2.0045 0 26594000 10048000 16546000 6968 587 2642 2711 10881;10882 10882 EDGLAQQQTQLNLR 14 0 1 Unmodified _EDGLAQQQTQLNLR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 812.4204 2 807.415725 1612.8169 67931.84 0.45747 0.00036937 -0.03093 -2.4973E-05 0.42654 0.00034439 807.415992310869 812.420013238679 75.142 0.50357 75.142 74.871 75.374 0 162 34 7 0 0 0 1.212E-06 1 39123 109.11 109.11 1 1.0047 0.86168 0 4465500 2239400 2226000 6969 587 2642 2711 10883 10883 EDGMVPFVFVGTK 13 1 0 Oxidation (M) _EDGM(ox)VPFVFVGTK_ EDGM(1)VPFVFVGTK EDGM(54.49)VPFVFVGTK 0 1 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.3629 2 721.355228 1440.6959 71570.37 0.73881 0.00053294 -0.28863 -0.00020821 0.45018 0.00032474 721.354997163742 725.362517832151 105.48 0.80173 105.48 105.02 105.82 0 249 61 6 0 0 0 0.0010943 1 65205 54.486 54.486 1 1.2155 1.2013 0 19349000 9471200 9878000 6970 531 2643 2712 10884 10884 389 EDGQEYAQVIK 11 1 0 Unmodified _EDGQEYAQVIK_ 0 0 0 A6NJH9;P47813;O14602 A6NJH9 A6NJH9 EIF1AY;EIF1AX Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.316 2 640.311874 1278.6092 NaN NaN NaN 0.3406 0.00021809 NaN NaN NaN NaN 51.235 0.5273 51.235 50.866 51.393 0 0 0 0 9.3155E-12 1 28338 122.33 89.33 1 NaN NaN 0 11378000 0 11378000 6971 687 2644 2713 10885 10885 EDGQEYAQVIK 11 1 0 Unmodified _EDGQEYAQVIK_ 0 0 0 A6NJH9;P47813;O14602 A6NJH9 A6NJH9 EIF1AY;EIF1AX Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.319 2 640.311874 1278.6092 75660.48 0.44242 0.00028328 0.92948 0.00059515 1.3719 0.00087844 640.312743203241 644.319200379056 59.143 0.51818 59.143 58.879 59.397 0 151 40 6 0 0 0 0.023549 1 30154 42.19 27.524 1 1.0435 0.84252 0 2781800 1247400 1534400 6972 687 2644 2713 10886 10886 EDGSGDRGDGPFR 13 0 2 Unmodified _EDGSGDRGDGPFR_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.5325 3 455.532366 1363.57527 88327.98 -0.042947 -1.9564E-05 -0.24993 -0.00011385 -0.29287 -0.00013341 455.532255042635 462.204425838081 20.854 0.77708 20.854 20.627 21.405 1.9073E-06 185 35 9 0 0 0 8.4867E-07 1 7180 110.38 110.38 1 0.33111 0.36141 0 173180000 128170000 45011000 6973 1476 2645 2714 10887 10887 EDGSGDRGDGPFR 13 0 2 Unmodified _EDGSGDRGDGPFR_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.8033 2 682.794911 1363.57527 73229.3 0.33164 0.00022644 0.025008 1.7075E-05 0.35664 0.00024351 682.794983978106 692.803295423007 20.83 0.5977 20.83 20.66 21.258 0 140 26 7 0 0 0 1.4188E-12 2 7212 126.71 114.66 1 0.32252 0.35196 0 162970000 119790000 43175000 6974 1476 2645 2714 10888;10889 10889 EDGSGDRGDGPFR 13 0 2 Unmodified _EDGSGDRGDGPFR_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.5325 3 455.532366 1363.57527 89172.27 0.33213 0.0001513 -0.046327 -2.1104E-05 0.2858 0.00013019 455.53237550585 462.20448193665 20.686 0.50903 20.686 20.54 21.049 0 69 19 9 0 0 0 1.5009E-06 2 6925 108.59 102.16 1 0.34187 0.39618 0 77500000 57760000 19739000 6975 1476 2645 2714 10890;10891 10890 EDGSGDRGDGPFR 13 0 2 Unmodified _EDGSGDRGDGPFR_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.7953 2 682.794911 1363.57527 73491.82 0.73101 0.00049913 -0.13843 -9.4517E-05 0.59259 0.00040462 682.795012207123 692.803138232627 20.708 0.43918 20.708 20.54 20.98 1.9073E-06 54 15 7 0 0 0 6.8702E-13 1 6926 153.97 153.97 1 0.29386 0.33883 0 63651000 48814000 14837000 6976 1476 2645 2714 10892 10892 EDGSGDRGDGPFR 13 0 2 Unmodified _EDGSGDRGDGPFR_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 455.5327 3 455.532366 1363.57527 88832.44 -0.073469 -3.3467E-05 0.06045 2.7537E-05 -0.013018 -5.9302E-06 455.532443093426 462.204553102039 22.374 0.80345 22.374 22.093 22.896 0 142 32 9 0 0 0 0.010768 1 7101 35.037 35.037 1 0.29847 0.24361 0 37326000 28718000 8607500 6977 1476 2645 2714 10893 10893 EDHEVEVGVLK 11 1 0 Unmodified _EDHEVEVGVLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.3296 2 627.322242 1252.62993 NaN NaN NaN 0.11072 6.9457E-05 NaN NaN NaN NaN 47.646 0.59081 47.646 47.292 47.883 0 0 0 0 7.6531E-65 1 25882 197.27 154.67 1 NaN NaN 0 26721000 0 26721000 6978 1945 2646 2715 10894 10894 EDHEVEVGVLK 11 1 0 Unmodified _EDHEVEVGVLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3291 2 627.322242 1252.62993 NaN NaN NaN -0.0076186 -4.7793E-06 NaN NaN NaN NaN 46.064 0.48855 46.064 45.814 46.303 0 0 0 0 3.8967E-52 1 25260 190.02 163.63 1 NaN NaN 0 35010000 0 35010000 6979 1945 2646 2715 10895 10895 EDHEVEVGVLK 11 1 0 Unmodified _EDHEVEVGVLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.3295 2 627.322242 1252.62993 73400.01 0.6085 0.00038173 0.15086 9.4635E-05 0.75936 0.00047636 627.322220433368 631.329241262214 53.956 0.7925 53.956 53.674 54.467 3.8147E-06 264 62 7 0 0 0 2.5352E-10 2 26783 133.99 104.91 1 2.7052 2.0989 0 12816000 3430300 9385500 6980 1945 2646 2715 10896;10897 10896 EDHEVEVGVLK 11 1 0 Unmodified _EDHEVEVGVLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.3295 2 627.322242 1252.62993 71759.99 0.47135 0.00029569 0.080817 5.0699E-05 0.55216 0.00034638 627.322206566444 631.3292045341 54.226 0.83593 54.226 53.868 54.704 3.8147E-06 269 61 7 0 0 0 1.1546E-08 2 26330 123.6 100.86 1 2.7626 2.2785 0 11027000 3105300 7921400 6981 1945 2646 2715 10898;10899 10898 EDHLMSAMNIK 11 1 0 2 Oxidation (M) _EDHLM(ox)SAM(ox)NIK_ EDHLM(1)SAM(1)NIK EDHLM(43.65)SAM(43.65)NIK 0 2 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;H7C528;A5YM43;Q8NDX5 B3KPJ4;A5YM43 B3KPJ4 PHC2;PHC3 Polyhomeotic-like protein 2;Polyhomeotic-like protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.8068 2 660.799762 1319.58497 NaN NaN NaN 0.46577 0.00030778 NaN NaN NaN NaN 21.966 0.32043 21.966 21.801 22.121 0 0 0 0 0.0098617 1 8102 43.651 27.989 1 NaN NaN 0 4470400 0 4470400 6982 479;677 2647 2716 10900 10900 327;328 EDHPDLIQNAK 11 1 0 Unmodified _EDHPDLIQNAK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;Q05BZ1 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.6372 2 640.317491 1278.62043 80729.82 0.79634 0.00050991 0.46817 0.00029978 1.2645 0.00080969 640.318028522071 644.324753868772 28.259 0.17407 28.259 28.17 28.344 0 23 11 4 0 0 0 0.047113 1 13317 55.908 55.908 1 0.6595 0.66799 0 5773700 3578400 2195200 6983 1244 2648 2717 10901 10901 EDIDAAIETYNLLSER 16 0 1 Unmodified _EDIDAAIETYNLLSER_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8;B4DS95 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.4562 2 926.45217 1850.88979 NaN NaN NaN -0.74606 -0.00069119 NaN NaN NaN NaN 118.23 0.47384 118.23 117.96 118.43 0 0 0 0 8.5568E-09 1 75787 100.55 86.646 1 NaN NaN 0 14719000 0 14719000 6984 1014 2649 2718 10902 10902 EDIDAAIETYNLLSER 16 0 1 Unmodified _EDIDAAIETYNLLSER_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8;B4DS95 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 926.4492 2 926.45217 1850.88979 NaN NaN NaN -0.54481 -0.00050474 NaN NaN NaN NaN 130.24 0.28131 130.24 130.11 130.39 0 0 0 0 0.04537 1 78930 35.645 29.8 1 NaN NaN 0 783520 783520 0 6985 1014 2649 2718 10903 10903 EDIIQGFR 8 0 1 Unmodified _EDIIQGFR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.2565 2 489.256174 976.497795 84631.27 0.35712 0.00017472 0.079595 3.8942E-05 0.43671 0.00021366 489.256262973634 494.260194167443 71.741 1.2053 71.741 71.261 72.467 0 517 101 10 0 0 0 0.0033502 1 41672 97.068 32.264 1 0.36836 0.436 0 355000000 261620000 93381000 6986 1476 2650 2719 10904 10904 EDIIQGFR 8 0 1 Unmodified _EDIIQGFR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.2566 2 489.256174 976.497795 85124.06 0.43043 0.00021059 -0.27273 -0.00013343 0.1577 7.7156E-05 489.256090836238 494.260072245085 70.481 1.0899 70.481 70.061 71.151 0 449 86 9 0 0 0 2.5117E-21 2 42022 185.22 67.526 1 0.36642 0.42708 0 470070000 339100000 130970000 6987 1476 2650 2719 10905;10906 10906 EDIIQGFR 8 0 1 Unmodified _EDIIQGFR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.2563 2 489.256174 976.497795 86866.48 0.21408 0.00010474 -0.097322 -4.7616E-05 0.11676 5.7126E-05 489.256148389352 494.26012726003 81.588 0.99324 81.588 81.156 82.149 0 360 60 10 0 0 0 0.0080127 2 44096 80.462 27.826 1 0.29702 0.2525 0 34384000 26092000 8291500 6988 1476 2650 2719 10907;10908 10907 EDIIQGFR 8 0 1 Unmodified _EDIIQGFR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.2561 2 489.256174 976.497795 86993.32 0.24196 0.00011838 0.10001 4.8931E-05 0.34197 0.00016731 489.256258354831 494.260255810133 81.782 1.1567 81.782 81.366 82.523 0 365 64 10 0 0 0 0.0052559 2 43407 91.041 32.874 1 0.28598 0.24946 0 31227000 24070000 7156300 6989 1476 2650 2719 10909;10910 10910 EDILNYLEK 9 1 0 Unmodified _EDILNYLEK_ 0 0 0 P11182;B4E1Q7;Q5VVL7 P11182 P11182 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.8033 2 568.795329 1135.5761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.28 1 100.28 99.775 100.78 7.6294E-06 0 0 0 0.014195 1 62974 59.597 23.04 1 6990 1469 2651 2720 10911 10911 EDILVTLNDLIK 12 1 0 Unmodified _EDILVTLNDLIK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3985 2 693.39795 1384.78135 73940.1 1.2147 0.00084226 -0.38448 -0.0002666 0.83021 0.00057566 693.397634493517 697.404677317455 130.97 0.80304 130.97 130.69 131.5 0 266 53 8 0 0 0 1.8219E-22 2 85325 150.81 150.81 1 0.76948 0.8273 0 40031000 24038000 15994000 6991 895 2652 2721 10912;10913 10912 EDILVTLNDLIK 12 1 0 Unmodified _EDILVTLNDLIK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.4055 2 693.39795 1384.78135 74571.35 0.97824 0.00067831 -0.090964 -6.3074E-05 0.88727 0.00061523 693.397800502815 697.404822133021 130.54 0.70734 130.54 130.28 130.99 0 285 47 9 0 0 0 1.0511E-17 2 87219 139.39 128.23 1 0.80659 0.89624 0 50232000 28101000 22131000 6992 895 2652 2721 10914;10915 10915 EDINLSVR 8 0 1 Unmodified _EDINLSVR_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.258 2 473.253631 944.49271 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.689 1 53.689 53.189 54.189 -3.8147E-06 0 0 0 0.042516 1 30683 57.047 13.924 1 6993 1763 2653 2722 10916 10916 EDISSIEIVGGATR 14 0 1 Unmodified _EDISSIEIVGGATR_ 0 0 0 B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2 B3KNM0 B3KNM0 HSPA4L Heat shock 70 kDa protein 4L ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.8775 2 723.87537 1445.73619 NaN NaN NaN -2.0625 -0.001493 NaN NaN NaN NaN 86.064 0.42604 86.064 85.884 86.31 0 0 0 0 0.00025887 1 51784 82.85 60.209 1 NaN NaN 0 8524700 0 8524700 6994 624 2654 2723 10917 10917 EDISSIEIVGGATR 14 0 1 Unmodified _EDISSIEIVGGATR_ 0 0 0 B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2 B3KNM0 B3KNM0 HSPA4L Heat shock 70 kDa protein 4L ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8763 2 723.87537 1445.73619 NaN NaN NaN 0.70105 0.00050747 NaN NaN NaN NaN 86.071 0.47696 86.071 85.834 86.31 0 0 0 0 0.0025167 1 51839 65.395 43.947 1 NaN NaN 0 6361400 6361400 0 6995 624 2654 2723 10918 10918 EDISSIEIVGGATR 14 0 1 Unmodified _EDISSIEIVGGATR_ 0 0 0 B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2 B3KNM0 B3KNM0 HSPA4L Heat shock 70 kDa protein 4L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.8788 2 723.87537 1445.73619 72645.06 0.72264 0.0005231 -1.1799 -0.00085407 -0.45721 -0.00033096 723.87524367084 728.877882681231 85.217 0.51279 85.217 85.039 85.552 0 121 42 4 0 0 0 0.00014105 1 52466 91.914 82.58 1 1.3845 1.3811 0 16666000 7790900 8875300 6996 624 2654 2723 10919 10919 EDITQEFPGK 10 1 0 Unmodified _EDITQEFPGK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;H0YE22 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.283 2 582.282586 1162.55062 NaN NaN NaN 0.024815 1.4449E-05 NaN NaN NaN NaN 58.095 0.41256 58.095 57.861 58.274 -3.8147E-06 0 0 0 0.013857 1 33668 59.35 25.553 1 NaN NaN 0 12181000 12181000 0 6997 1054 2655 2724 10920 10920 EDITQSAQHALR 12 0 1 Unmodified _EDITQSAQHALR_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7;B4DFG4 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8513 2 684.846947 1367.67934 NaN NaN NaN 0.00034182 2.341E-07 NaN NaN NaN NaN 41.029 0.35635 41.029 40.793 41.15 0 0 0 0 0.00062905 1 21464 86.898 52.976 1 NaN NaN 0 5677900 0 5677900 6998 220 2656 2725 10921 10921 EDITQSAQHALR 12 0 1 Unmodified _EDITQSAQHALR_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7;B4DFG4 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.2363 3 456.90039 1367.67934 NaN NaN NaN -0.2301 -0.00010513 NaN NaN NaN NaN 41.039 0.41331 41.039 40.785 41.198 0 0 0 0 0.00066001 1 21518 69.451 56.266 1 NaN NaN 0 8987800 0 8987800 6999 220 2656 2725 10922 10922 EDITQSAQHALR 12 0 1 Unmodified _EDITQSAQHALR_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7;B4DFG4 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.851 2 684.846947 1367.67934 76131.2 0.89741 0.00061459 -0.4554 -0.00031188 0.44201 0.00030271 684.846064066446 689.850735518393 39.952 0.3167 39.952 39.783 40.1 0 69 27 4 0 0 0 0.00022365 2 21205 87.913 76.32 1 1.6032 1.5779 0 14467000 4870100 9596700 7000 220 2656 2725 10923;10924 10923 EDITQSAQHALR 12 0 1 Unmodified _EDITQSAQHALR_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7;B4DFG4 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.3495 2 684.846947 1367.67934 75254.58 0.3348 0.00022929 1.9284 0.0013206 2.2632 0.0015499 685.349274664551 689.853563203193 47.581 0.46102 47.581 47.452 47.913 3.8147E-06 76 30 5 0 0 0 0.015044 1 23066 43.168 40.414 1 1.4348 1.2683 0 1366000 825100 540910 7001 220 2656 2725 10925 10925 EDKYEEEIK 9 2 0 Unmodified _EDKYEEEIK_ 0 0 1 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;Q8NAG3;B4DWT5;Q5VU61;J3KN67;M1VPF4;P06753;Q6LDX7;Q5VU62;B4DQ80;Q8NAH0;Q8NI98;K7EPB9;B4DVY2;V9HW56;P67936;B4DTB1;V9HW25;Q5TCU3;CON__Q3SX28;A7XZE4;Q5TCU8;P07951;K7EMU5;U3KQK2 Q5HYB6;B4DVY2 Q5HYB6 DKFZp686J1372;TPM3;TPM3-ROS1;HEL-S-82p;OK/SW-cl.5;TPM4;HEL-S-108;HEL-S-273;TPM2;TPM2b Tyrosine-protein kinase receptor;Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.7958 2 591.779876 1181.5452 77779.06 0.74061 0.00043828 -0.18455 -0.00010922 0.55606 0.00032906 591.779637454009 599.794032798977 23.843 0.39489 23.843 23.666 24.061 -1.9073E-06 77 19 6 0 0 0 0.041951 1 9615 61.679 61.679 1 2.4167 2.8535 0 41836000 9662400 32174000 + 7002 562;1043 2657 2726 10926 10926 EDKYEEEIK 9 2 0 Unmodified _EDKYEEEIK_ 0 0 1 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;Q8NAG3;B4DWT5;Q5VU61;J3KN67;M1VPF4;P06753;Q6LDX7;Q5VU62;B4DQ80;Q8NAH0;Q8NI98;K7EPB9;B4DVY2;V9HW56;P67936;B4DTB1;V9HW25;Q5TCU3;CON__Q3SX28;A7XZE4;Q5TCU8;P07951;K7EMU5;U3KQK2 Q5HYB6;B4DVY2 Q5HYB6 DKFZp686J1372;TPM3;TPM3-ROS1;HEL-S-82p;OK/SW-cl.5;TPM4;HEL-S-108;HEL-S-273;TPM2;TPM2b Tyrosine-protein kinase receptor;Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.7941 2 591.779876 1181.5452 78568.38 0.42578 0.00025197 0.37209 0.0002202 0.79787 0.00047216 591.779894789184 599.793767562496 23.35 0.54864 23.35 22.965 23.514 1.9073E-06 91 24 7 0 0 0 5.0842E-07 3 9211 140.17 140.17 1 2.7936 3.2304 0 36464000 9584400 26879000 + 7003 562;1043 2657 2726 10927;10928;10929 10928 EDKYEEEIK 9 2 0 Unmodified _EDKYEEEIK_ 0 0 1 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;Q8NAG3;B4DWT5;Q5VU61;J3KN67;M1VPF4;P06753;Q6LDX7;Q5VU62;B4DQ80;Q8NAH0;Q8NI98;K7EPB9;B4DVY2;V9HW56;P67936;B4DTB1;V9HW25;Q5TCU3;CON__Q3SX28;A7XZE4;Q5TCU8;P07951;K7EMU5;U3KQK2 Q5HYB6;B4DVY2 Q5HYB6 DKFZp686J1372;TPM3;TPM3-ROS1;HEL-S-82p;OK/SW-cl.5;TPM4;HEL-S-108;HEL-S-273;TPM2;TPM2b Tyrosine-protein kinase receptor;Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 591.7804 2 591.779876 1181.5452 77716.14 0.41151 0.00024352 -0.68599 -0.00040596 -0.27448 -0.00016243 591.779925367025 599.793741430494 26.452 0.84837 26.452 25.955 26.803 0 128 38 7 0 0 0 0.047034 2 9480 60.828 60.828 1 2.4954 2.1375 0 4233700 1379100 2854600 + 7004 562;1043 2657 2726 10930;10931 10931 EDLAAFVEELDK 12 1 0 Unmodified _EDLAAFVEELDK_ 0 0 0 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8408 2 689.840465 1377.66638 73019.33 0.74234 0.00051209 -0.060942 -4.2041E-05 0.68139 0.00047005 689.840390059639 693.847381665408 120.95 0.81703 120.95 120.65 121.47 7.6294E-06 321 55 9 0 0 0 1.5678E-22 2 77930 152.54 152.54 1 0.55904 0.63364 0 92857000 57035000 35822000 7005 1679 2658 2727 10932;10933 10933 EDLAAFVEELDK 12 1 0 Unmodified _EDLAAFVEELDK_ 0 0 0 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.848 2 689.840465 1377.66638 72993.89 0.97277 0.00067106 0.011698 8.0696E-06 0.98447 0.00067913 689.840444480233 693.847431654979 120.5 0.70007 120.5 120.19 120.89 0 320 49 9 0 0 0 4.3994E-19 3 79513 150.1 150.1 1 0.56612 0.63272 0 98073000 59219000 38854000 7006 1679 2658 2727 10934;10935;10936 10936 EDLAAFVEELDK 12 1 0 Unmodified _EDLAAFVEELDK_ 0 0 0 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.8478 2 689.840465 1377.66638 73572.34 0.68881 0.00047517 0.10317 7.1172E-05 0.79198 0.00054634 689.840444113303 693.84758422534 133.53 0.66586 133.53 133.3 133.97 0 169 27 8 0 0 0 2.1858E-05 2 81244 102.53 92.299 1 1.0153 0.81138 0 20377000 10181000 10195000 7007 1679 2658 2727 10937;10938 10937 EDLAAFVEELDK 12 1 0 Unmodified _EDLAAFVEELDK_ 0 0 0 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.3421 2 689.840465 1377.66638 73865.88 1.0153 0.00070041 -0.092141 -6.3563E-05 0.92318 0.00063684 689.840325088535 693.8475045058 133.3 0.68735 133.3 133.09 133.78 0 150 27 10 0 0 0 4.6617E-08 2 80168 114.89 104.66 1 0.98095 0.78562 0 21667000 11045000 10622000 7008 1679 2658 2727 10939;10940 10939 EDLATFIEELEAVEAK 16 1 0 Unmodified _EDLATFIEELEAVEAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.955 2 903.954014 1805.89348 65738.71 0.90905 0.00082174 -0.28634 -0.00025884 0.62271 0.0005629 903.953562265215 908.462492030186 143.75 0.6356 143.75 143.49 144.13 0 154 67 5 0 0 0 0.0023583 1 90860 41.242 35.963 1 0.72527 0.83796 0 1486500 793150 693350 7009 1471 2659 2728 10941 10941 EDLATFIEELEAVEAK 16 1 0 Unmodified _EDLATFIEELEAVEAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.9545 2 903.954014 1805.89348 NaN NaN NaN -0.8273 -0.00074784 NaN NaN NaN NaN 144.43 0.16541 144.43 144.34 144.5 -1.5259E-05 0 0 0 0.010767 1 91094 47.288 33.86 1 NaN NaN 0 326290 326290 0 7010 1471 2659 2728 10942 10942 EDLATFIEELEAVEAK 16 1 0 Unmodified _EDLATFIEELEAVEAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.9619 2 903.954014 1805.89348 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.68 1 133.68 133.18 134.18 0 0 0 0 6.1613E-13 1 87668 119.69 88.817 1 7011 1471 2659 2728 10943 10943 EDLATFIEELEAVEAK 16 1 0 Unmodified _EDLATFIEELEAVEAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 907.9614 2 903.954014 1805.89348 63783.41 0.64986 0.00058744 -0.21133 -0.00019103 0.43853 0.00039641 904.455523146404 907.960846133235 133.6 0.5226 133.6 133.34 133.86 0 32 16 5 0 0 0 0.00015642 1 89895 94.191 83.581 1 NaN NaN 0 896740000 420280000 476470000 7012 1471 2659 2728 10944 10944 EDLATFIEELEAVEAK 16 1 0 Unmodified _EDLATFIEELEAVEAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.9543 2 903.954014 1805.89348 65352.97 0.033824 3.0575E-05 0.70906 0.00064096 0.74289 0.00067154 903.954573897817 907.961711070464 143.56 0.7467 143.56 143.28 144.03 0 188 81 4 0 0 0 0.00010883 3 92508 91.858 91.858 1 0.74047 0.81758 0 2481100 1491500 989620 7013 1471 2659 2728 10945;10946;10947 10947 EDLATFIEELEAVEAK 16 1 0 Unmodified _EDLATFIEELEAVEAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 903.9549 2 903.954014 1805.89348 65029.54 0.59442 0.00053732 0.73032 0.00066018 1.3247 0.0011975 903.954700714228 907.961670060958 134.97 0.59909 134.97 134.8 135.4 0 111 23 9 0 0 0 1.5414E-95 2 82669 225.15 202.13 1 13.569 12.091 0 417550000 184440000 233110000 7014 1471 2659 2728 10948;10949 10949 EDLCISPGK 9 1 0 Unmodified _EDLCISPGK_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.7474 2 509.747324 1017.4801 89026.64 0.29549 0.00015063 0.34274 0.00017471 0.63823 0.00032533 509.747455132799 513.754676471005 43.32 0.4593 43.32 43.167 43.627 3.8147E-06 107 38 4 0 0 0 0.013595 1 23181 56.434 39.338 1 0.8514 0.86405 0 13505000 8633000 4872100 7015 1959 2660 2729 10950 10950 EDLLDQLK 8 1 0 Unmodified _EDLLDQLK_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.2639 2 487.263665 972.512776 87956.61 0.10988 5.3541E-05 0.82688 0.00040291 0.93676 0.00045645 487.263881894766 491.271341238241 86.081 0.62023 86.081 85.737 86.357 0 198 51 5 0 0 0 0.011932 2 51748 68.787 31.424 1 0.8884 0.9187 0 29183000 16252000 12931000 7016 655 2661 2730 10951;10952 10952 EDLLDQLK 8 1 0 Unmodified _EDLLDQLK_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.2637 2 487.263665 972.512776 87317.03 0.60696 0.00029575 0.43615 0.00021252 1.0431 0.00050827 487.263448979395 491.271300379421 85.194 0.65254 85.194 84.795 85.447 0 226 55 6 0 0 0 0.010573 3 52265 71.922 28.822 1 0.92925 0.96737 0 24522000 13437000 11085000 7017 655 2661 2730 10953;10954;10955 10955 EDLMGLAIGTHGANIQQAR 19 0 1 Oxidation (M) _EDLM(ox)GLAIGTHGANIQQAR_ EDLM(1)GLAIGTHGANIQQAR EDLM(81.72)GLAIGTHGANIQQAR 0 1 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WY29;A0A087WWR6;P51116 X5DQX7;P51116 P51116 FMR1;FXR2 Fragile X mental retardation protein 1;Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3412 3 671.005701 2009.99527 72070.5 0.4761 0.00031946 -0.14588 -9.7883E-05 0.33022 0.00022158 671.005203138323 674.341917558529 73.333 0.38224 73.333 73.109 73.491 0 151 35 6 0 0 0 1.0305E-06 2 42950 81.723 63.427 1 1.721 1.7607 0 31724000 12038000 19685000 7018 1593;1689 2662 2731 10956;10957 10957 1377 EDLMGLAIGTHGANIQQAR 19 0 1 Oxidation (M) _EDLM(ox)GLAIGTHGANIQQAR_ EDLM(1)GLAIGTHGANIQQAR EDLM(45.7)GLAIGTHGANIQQAR 0 1 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WY29;A0A087WWR6;P51116 X5DQX7;P51116 P51116 FMR1;FXR2 Fragile X mental retardation protein 1;Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3419 3 671.005701 2009.99527 72190.72 0.71456 0.00047948 -0.59159 -0.00039696 0.12297 8.2513E-05 671.340224371693 674.341842190174 73.616 0.52029 73.616 73.399 73.919 0 188 48 7 0 0 0 5.7354E-05 1 43144 45.704 32.277 1 1.6696 1.6939 0 28832000 12635000 16197000 7019 1593;1689 2662 2731 10958 10958 1377 EDLMGLAIGTHGANIQQAR 19 0 1 Oxidation (M) _EDLM(ox)GLAIGTHGANIQQAR_ EDLM(1)GLAIGTHGANIQQAR EDLM(75.97)GLAIGTHGANIQQAR 0 1 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WY29;A0A087WWR6;P51116 X5DQX7;P51116 P51116 FMR1;FXR2 Fragile X mental retardation protein 1;Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.3414 3 671.005701 2009.99527 72038.24 0.25504 0.00017114 -0.20059 -0.00013459 0.054458 3.6541E-05 671.674841546483 674.676026550091 72.069 0.4043 72.069 71.873 72.278 0 154 36 7 0 0 0 2.0529E-06 2 43198 75.97 56.059 1 1.6754 1.8782 0 45308000 18630000 26678000 7020 1593;1689 2662 2731 10959;10960 10959 1377 EDLMGLAIGTHGSNIQQAR 19 0 1 Oxidation (M) _EDLM(ox)GLAIGTHGSNIQQAR_ EDLM(1)GLAIGTHGSNIQQAR EDLM(81.72)GLAIGTHGSNIQQAR 0 1 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.0091 3 676.337339 2025.99019 74604.7 0.65586 0.00044358 -0.27735 -0.00018758 0.37851 0.000256 676.671543824664 680.00770554862 68.246 0.90805 68.246 67.639 68.547 0 200 80 5 0 0 0 1.0305E-06 2 39364 81.723 81.723 1 1.6144 1.669 0 20211000 6611800 13600000 7021 531 2663 2732 10961;10962 10961 390 EDLMGLAIGTHGSNIQQAR 19 0 1 Oxidation (M) _EDLM(ox)GLAIGTHGSNIQQAR_ EDLM(1)GLAIGTHGSNIQQAR EDLM(45.61)GLAIGTHGSNIQQAR 0 1 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.6722 3 676.337339 2025.99019 NaN NaN NaN -0.36476 -0.0002467 NaN NaN NaN NaN 68.053 0.63472 68.053 67.671 68.306 0 0 0 0 0.0037643 1 39354 45.608 29.973 1 NaN NaN 0 8338200 8338200 0 7022 531 2663 2732 10963 10963 390 EDLMGLAIGTHGSNIQQAR 19 0 1 Oxidation (M) _EDLM(ox)GLAIGTHGSNIQQAR_ EDLM(1)GLAIGTHGSNIQQAR EDLM(71.74)GLAIGTHGSNIQQAR 0 1 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.008 3 676.337339 2025.99019 68894.17 0.58727 0.00039719 0.031888 2.1567E-05 0.61915 0.00041876 676.67175410808 679.673363161624 66.747 0.45044 66.747 66.453 66.903 0 145 37 5 0 0 0 2.8999E-06 2 39530 71.742 71.742 1 1.3931 1.4895 0 24901000 10022000 14880000 7023 531 2663 2732 10964;10965 10965 390 EDLMGLAIGTHGSNIQQAR 19 0 1 Oxidation (M) _EDLM(ox)GLAIGTHGSNIQQAR_ EDLM(1)GLAIGTHGSNIQQAR EDLM(60.94)GLAIGTHGSNIQQAR 0 1 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.6737 3 676.337339 2025.99019 NaN NaN NaN -0.026584 -1.798E-05 NaN NaN NaN NaN 67.075 0.75901 67.075 66.545 67.304 0 0 0 0 0.00025974 1 39600 60.938 51.181 1 NaN NaN 0 18160000 0 18160000 7024 531 2663 2732 10966 10966 390 EDLNCQEEEDPMNK 14 1 0 Oxidation (M) _EDLNCQEEEDPM(ox)NK_ EDLNCQEEEDPM(1)NK EDLNCQEEEDPM(55.31)NK 0 1 0 Q6IAM0;O75821;K7EL20;A8K5K5;B7Z1G0;K7ENA8 Q6IAM0 Q6IAM0 EIF3G Eukaryotic translation initiation factor 3 subunit G MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.8514 2 883.845823 1765.67709 68056.86 0.59681 0.00052749 -0.32974 -0.00029143 0.26708 0.00023606 883.8460295367 887.851798139073 23.483 0.23949 23.483 23.336 23.575 0 27 11 5 0 0 0 0.00058646 1 9326 55.314 55.314 1 1.4884 1.6319 0 3172800 1337500 1835200 7025 1414 2664 2733 10967 10967 1107 EDLNCQEEEDPMNK 14 1 0 Oxidation (M) _EDLNCQEEEDPM(ox)NK_ EDLNCQEEEDPM(1)NK EDLNCQEEEDPM(45.88)NK 0 1 0 Q6IAM0;O75821;K7EL20;A8K5K5;B7Z1G0;K7ENA8 Q6IAM0 Q6IAM0 EIF3G Eukaryotic translation initiation factor 3 subunit G ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.8536 2 883.845823 1765.67709 NaN NaN NaN 0.79668 0.00070415 NaN NaN NaN NaN 22.755 0.2353 22.755 22.674 22.91 0 0 0 0 0.0059688 1 8796 45.879 36.192 1 NaN NaN 0 2611300 0 2611300 7026 1414 2664 2733 10968 10968 1107 EDLPAENGETK 11 1 0 Unmodified _EDLPAENGETK_ 0 0 0 A6NL93;Q6NSG7;Q3B790;A6NEL0;P05114;A0A024R2A3 A6NL93 A6NL93 HMGN1;hCG_1979072 Non-histone chromosomal protein HMG-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.7805 2 601.780407 1201.54626 77351.17 0.64705 0.00038938 -0.34764 -0.0002092 0.2994 0.00018018 601.78030260086 605.787376734032 24.179 0.65867 24.179 23.849 24.508 0 146 29 8 0 0 0 5.164E-10 2 9885 129.85 97.531 1 0.86124 0.96949 0 121090000 65157000 55931000 7027 679 2665 2734 10969;10970 10970 EDLPAENGETK 11 1 0 Unmodified _EDLPAENGETK_ 0 0 0 A6NL93;Q6NSG7;Q3B790;A6NEL0;P05114;A0A024R2A3 A6NL93 A6NL93 HMGN1;hCG_1979072 Non-histone chromosomal protein HMG-14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.7875 2 601.780407 1201.54626 NaN NaN NaN -0.60182 -0.00036216 NaN NaN NaN NaN 23.859 0.61317 23.859 23.514 24.127 0 0 0 0 5.6731E-17 1 9662 142.43 109.16 1 NaN NaN 0 60599000 0 60599000 7028 679 2665 2734 10971 10971 EDLPAENGETK 11 1 0 Unmodified _EDLPAENGETK_ 0 0 0 A6NL93;Q6NSG7;Q3B790;A6NEL0;P05114;A0A024R2A3 A6NL93 A6NL93 HMGN1;hCG_1979072 Non-histone chromosomal protein HMG-14 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.7806 2 601.780407 1201.54626 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.845 1 23.845 23.345 24.345 0 0 0 0 9.0605E-18 1 9664 134.25 98.809 1 7029 679 2665 2734 10972 10972 EDLPAENGETK 11 1 0 Unmodified _EDLPAENGETK_ 0 0 0 A6NL93;Q6NSG7;Q3B790;A6NEL0;P05114;A0A024R2A3 A6NL93 A6NL93 HMGN1;hCG_1979072 Non-histone chromosomal protein HMG-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.7809 2 601.780407 1201.54626 77621.51 0.4641 0.00027929 0.092601 5.5726E-05 0.55671 0.00033501 601.780550464415 605.787587127697 26.833 0.54883 26.833 26.572 27.121 0 147 26 7 0 0 0 0.00026225 2 10202 90.108 59.854 1 0.43864 0.34997 0 9417500 6579400 2838000 7030 679 2665 2734 10973;10974 10973 EDLPAENGETK 11 1 0 Unmodified _EDLPAENGETK_ 0 0 0 A6NL93;Q6NSG7;Q3B790;A6NEL0;P05114;A0A024R2A3 A6NL93 A6NL93 HMGN1;hCG_1979072 Non-histone chromosomal protein HMG-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.782 2 601.780407 1201.54626 77167.88 0.31016 0.00018665 0.1235 7.4319E-05 0.43366 0.00026097 601.780567476291 605.787366824812 26.917 0.36469 26.917 26.753 27.118 0 76 17 6 0 0 0 0.01687 1 9759 45.598 26.327 1 0.46301 0.36774 0 3126800 2089900 1036900 7031 679 2665 2734 10975 10975 EDLPAENGETKTEESPASDEAGEK 24 2 0 Unmodified _EDLPAENGETKTEESPASDEAGEK_ 0 0 1 A6NL93;Q6NSG7;Q3B790;A6NEL0;P05114;A0A024R2A3 A6NL93 A6NL93 HMGN1;hCG_1979072 Non-histone chromosomal protein HMG-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 850.3843 3 845.040187 2532.09873 65590.37 0.39942 0.00033753 0.12361 0.00010445 0.52303 0.00044198 845.374587684584 850.717291655429 39.446 0.68074 39.446 39.174 39.855 0 393 52 11 0 0 0 0.0016182 1 17922 26.157 26.157 1 0.46961 0.39923 0 35358000 24338000 11019000 7032 679 2666 2735 10976 10976 EDLPAENGETKTEESPASDEAGEK 24 2 0 Unmodified _EDLPAENGETKTEESPASDEAGEK_ 0 0 1 A6NL93;Q6NSG7;Q3B790;A6NEL0;P05114;A0A024R2A3 A6NL93 A6NL93 HMGN1;hCG_1979072 Non-histone chromosomal protein HMG-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.3753 3 845.040187 2532.09873 65503.82 0.33853 0.00028607 0.28234 0.00023859 0.62087 0.00052466 845.37470488913 850.717451684911 39.749 0.61195 39.749 39.477 40.089 3.8147E-06 344 48 9 0 0 0 0.0019498 2 17610 24.276 21.553 1 0.44926 0.38171 0 28219000 19576000 8643200 7033 679 2666 2735 10977;10978 10977 EDLQELNDR 9 0 1 Unmodified _EDLQELNDR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.2729 2 566.267467 1130.52038 80551.96 0.76026 0.00043051 -0.049906 -2.826E-05 0.71035 0.00040225 566.267380085681 571.271519167724 37.098 0.97538 37.098 36.72 37.696 0 475 85 8 0 0 0 0.00064685 2 18684 96.331 70.71 1 1.3457 1.5744 0 206950000 89075000 117870000 7034 1440 2667 2736 10979;10980 10979 EDLQELNDR 9 0 1 Unmodified _EDLQELNDR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.2713 2 566.267467 1130.52038 80036.94 0.49238 0.00027882 0.065043 3.6832E-05 0.55743 0.00031565 566.267387535107 571.271532855434 42.509 1.0093 42.509 42.169 43.178 0 407 69 9 0 0 0 0.0019674 2 19927 78.516 58.73 1 1.4724 1.2139 0 18522000 6986200 11536000 7035 1440 2667 2736 10981;10982 10982 EDLQELNDR 9 0 1 Unmodified _EDLQELNDR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.267 2 566.267467 1130.52038 79491.51 0.16617 9.4099E-05 0.1848 0.00010465 0.35098 0.00019875 566.267486897248 571.2716855721 42.819 0.97495 42.819 42.433 43.408 0 327 60 9 0 0 0 0.00056832 2 19552 97.431 71.325 1 1.4717 1.2513 0 19246000 7824800 11421000 7036 1440 2667 2736 10983;10984 10984 EDLQPVQIQSLETLGVLAR 19 0 1 Unmodified _EDLQPVQIQSLETLGVLAR_ 0 0 0 H0YN14;D3DS63;B3KTB3;B3KT38;B3KPS9;Q59FI4;Q8TEX9;B3KPY9;Q6I9Y8;B3KSQ4;Q59H62;B3KQ33;B4DXR7 H0YN14 H0YN14 IPO4 Importin-4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1060.084 2 1055.08114 2108.14773 NaN NaN NaN -0.14553 -0.00015354 NaN NaN NaN NaN 126.94 0.21879 126.94 126.87 127.09 7.6294E-06 0 0 0 0.032444 1 84744 31.827 24.103 1 NaN NaN 0 2527600 0 2527600 7037 923 2668 2737 10985 10985 EDLRLPEGDLGK 12 1 1 Unmodified _EDLRLPEGDLGK_ 0 0 1 I3L397;I3L504;P63241 I3L397 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.905 3 447.905141 1340.69359 89711.24 0.0087242 3.9076E-06 0.43584 0.00019522 0.44457 0.00019912 447.905084309479 453.912654649934 66.197 1.3686 66.197 65.625 66.993 0 523 116 7 0 0 0 0.010766 2 38017 37.327 37.327 1 4.1793 5.029 0 92095000 19979000 72116000 7038 1322 2669 2738 10986;10987 10987 EDLRLPEGDLGK 12 1 1 Unmodified _EDLRLPEGDLGK_ 0 0 1 I3L397;I3L504;P63241 I3L397 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.9126 3 447.905141 1340.69359 88756.37 0.075857 3.3977E-05 -0.064925 -2.908E-05 0.010932 4.8965E-06 447.905149103165 453.912555872496 64.703 1.0184 64.703 64.116 65.135 0 452 90 8 0 0 0 0.0079461 1 37904 41.644 41.644 1 3.5886 4.2471 0 196930000 47462000 149460000 7039 1322 2669 2738 10988 10988 EDLRLPEGDLGK 12 1 1 Unmodified _EDLRLPEGDLGK_ 0 0 1 I3L397;I3L504;P63241 I3L397 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.365 2 671.354074 1340.69359 NaN NaN NaN -0.57283 -0.00038457 NaN NaN NaN NaN 64.636 0.71088 64.636 64.262 64.973 0 0 0 0 5.1014E-07 2 37953 107.06 77.582 1 NaN NaN 0 59479000 0 59479000 7040 1322 2669 2738 10989;10990 10989 EDLRNEVQK 9 1 1 Unmodified _EDLRNEVQK_ 0 0 1 REV__Q5THJ4 REV__Q5THJ4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 383.539 3 377.531527 1129.57275 95994.8 0.29471 0.00011126 -0.26204 -9.8928E-05 0.032671 1.2334E-05 377.531504091768 383.538857837488 16.386 0.57021 16.386 16.225 16.795 0 129 26 9 0 0 0 0.0066654 1 3733 47.603 2.4418 1 0.73123 0.87283 0 51582000 30515000 21066000 + 7041 2180 2670 2739 10991 10991 EDLSGIAEMFK 11 1 0 Oxidation (M) _EDLSGIAEM(ox)FK_ EDLSGIAEM(1)FK EDLSGIAEM(118.71)FK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.3051 2 628.297378 1254.5802 74753.57 0.9341 0.00058689 0.0073907 4.6435E-06 0.94149 0.00059153 628.29736636948 632.304437388743 93.142 1.2063 93.142 92.521 93.728 -7.6294E-06 590 105 8 0 0 0 2.0388E-08 3 56582 118.71 111.07 1 2.1744 2.476 0 170420000 55043000 115380000 7042 1569;1864 2671 2740 10992;10993;10994 10993 1330 EDLSGIAEMFK 11 1 0 Oxidation (M) _EDLSGIAEM(ox)FK_ EDLSGIAEM(1)FK EDLSGIAEM(123.86)FK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.3065 2 628.297378 1254.5802 76656.79 0.75165 0.00047226 -0.46496 -0.00029214 0.28669 0.00018013 628.297124308411 632.304306623659 92.569 1.2044 92.569 91.855 93.059 -7.6294E-06 542 101 8 0 0 0 4.7836E-09 2 57033 123.86 115.4 1 2.2912 2.6742 0 269510000 73906000 195600000 7043 1569;1864 2671 2740 10995;10996 10995 1330 EDLSGIAEMFK 11 1 0 Oxidation (M) _EDLSGIAEM(ox)FK_ EDLSGIAEM(1)FK EDLSGIAEM(67.7)FK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3044 2 628.297378 1254.5802 75458.5 0.62298 0.00039141 0.0098603 6.1952E-06 0.63284 0.00039761 628.297369231506 632.304588571041 106.31 0.95358 106.31 105.78 106.74 0 283 50 8 0 0 0 0.00068404 2 60600 67.704 63.405 1 2.4452 1.9205 0 17047000 4838800 12208000 7044 1569;1864 2671 2740 10997;10998 10997 1330 EDLSGIAEMFK 11 1 0 Oxidation (M) _EDLSGIAEM(ox)FK_ EDLSGIAEM(1)FK EDLSGIAEM(74.42)FK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3047 2 628.297378 1254.5802 76560.56 0.70369 0.00044213 0.14944 9.3895E-05 0.85313 0.00053602 628.297571722842 632.304544471147 124.6 0.56064 124.6 124.34 124.9 7.6294E-06 103 24 6 0 0 0 0.00025885 1 74624 74.424 72.821 1 3.3878 2.6844 0 4844500 1114400 3730200 7045 1569;1864 2671 2740 10999 10999 1330 EDLSGIAEMFK 11 1 0 Oxidation (M) _EDLSGIAEM(ox)FK_ EDLSGIAEM(1)FK EDLSGIAEM(53.6)FK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.306 2 628.297378 1254.5802 76662.52 0.6724 0.00042247 -0.24871 -0.00015626 0.42369 0.0002662 628.297270334534 632.304455306402 106.23 0.9109 106.23 105.79 106.7 0 342 55 9 0 0 0 0.0033371 1 59590 53.597 48.3 1 2.5322 2.0553 0 24719000 6413000 18306000 7046 1569;1864 2671 2740 11000 11000 1330 EDLSGIAEMFK 11 1 0 Oxidation (M) _EDLSGIAEM(ox)FK_ EDLSGIAEM(1)FK EDLSGIAEM(49.47)FK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.3044 2 628.297378 1254.5802 77330.71 0.76211 0.00047883 -0.25691 -0.00016141 0.50521 0.00031742 628.297337661128 632.304445758073 124.44 0.61677 124.44 124.18 124.79 0 116 27 7 0 0 0 0.004494 1 73612 49.472 49.472 1 3.8245 3.1184 0 4639600 968400 3671200 7047 1569;1864 2671 2740 11001 11001 1330 EDLSGIAEMFK 11 1 0 Unmodified _EDLSGIAEMFK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.3 2 620.299921 1238.58529 80516.59 0.88352 0.00054805 -0.060782 -3.7703E-05 0.82274 0.00051035 620.299822030042 624.306454542464 113.39 0.43439 113.39 113.15 113.58 -7.6294E-06 92 33 5 0 0 0 0.0033898 1 71796 59.908 49.642 1 1.2901 1.3106 0 6287600 2687600 3600000 7048 1569;1864 2671 2741 11002 11002 EDLSGIAEMFK 11 1 0 Unmodified _EDLSGIAEMFK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.3071 2 620.299921 1238.58529 76913.34 0.71122 0.00044117 0.091461 5.6733E-05 0.80268 0.0004979 620.300214342029 624.30705276455 124.58 0.70816 124.58 124.26 124.97 7.6294E-06 149 30 7 0 0 0 0.0086859 1 74540 50.353 44.796 1 4.0003 3.1037 0 14184000 2406500 11778000 7049 1569;1864 2671 2741 11003 11003 EDLSGIAEMFK 11 1 0 Unmodified _EDLSGIAEMFK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.3074 2 620.299921 1238.58529 77456.5 0.67396 0.00041806 0.03542 2.1971E-05 0.70938 0.00044003 620.300048731757 624.306961366225 124.43 0.68379 124.43 124.15 124.83 0 154 30 7 0 0 0 7.8874E-05 2 73552 98.048 74.977 1 3.9299 3.1986 0 12965000 2430600 10534000 7050 1569;1864 2671 2741 11004;11005 11004 EDLTEIR 7 0 1 Unmodified _EDLTEIR_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.2271 2 438.227082 874.439611 90170.84 0.028782 1.2613E-05 0.15734 6.8952E-05 0.18613 8.1565E-05 438.227041514623 443.231192335975 41.931 0.75945 41.931 41.58 42.339 0 318 59 8 0 0 0 0.026488 2 22075 88.029 43.056 1 0.82441 0.96959 0 230550000 120240000 110310000 7051 345 2672 2742 11006;11007 11007 EDLTEIR 7 0 1 Unmodified _EDLTEIR_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 438.227 2 438.227082 874.439611 89919.09 0.13322 5.838E-05 -0.29486 -0.00012921 -0.16164 -7.0835E-05 438.226941683182 443.231012597057 40.765 0.60948 40.765 40.545 41.155 0 154 45 8 0 0 0 0.009996 2 21847 116.11 57.869 1 0.85558 0.99492 0 390250000 211560000 178690000 7052 345 2672 2742 11008;11009 11009 EDLTEIR 7 0 1 Unmodified _EDLTEIR_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 438.2269 2 438.227082 874.439611 90903.45 -0.28743 -0.00012596 0.35472 0.00015545 0.067291 2.9489E-05 438.227137666543 443.231287685245 47.724 0.53377 47.724 47.464 47.997 0 189 34 9 0 0 0 0.042314 1 23133 58.604 34.632 1 0.92771 0.77478 0 23603000 11447000 12156000 7053 345 2672 2742 11010 11010 EDLTEIR 7 0 1 Unmodified _EDLTEIR_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.2308 2 438.227082 874.439611 88171.57 -0.27233 -0.00011934 -0.35089 -0.00015377 -0.62321 -0.00027311 438.22663709455 443.231098004999 47.685 0.53049 47.685 47.502 48.033 3.8147E-06 154 40 8 0 0 0 0.037624 2 22606 60.76 32.653 1 0.99922 0.87159 0 37443000 18961000 18482000 7054 345 2672 2742 11011;11012 11012 EDLTEIRDMLLANK 14 1 1 Oxidation (M) _EDLTEIRDM(ox)LLANK_ EDLTEIRDM(1)LLANK EDLTEIRDM(41.09)LLANK 0 1 1 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.9638 3 559.622305 1675.84509 79390.75 0.69468 0.00038876 -0.20875 -0.00011682 0.48593 0.00027194 559.622154690172 565.629758569454 94.434 0.85514 94.434 94.015 94.87 0 464 79 9 0 0 0 0.0017612 1 57149 41.092 41.092 1 1.3979 1.6883 0 162520000 71056000 91464000 7055 345 2673 2743 11013 11013 257 EDLTEIRDMLLANK 14 1 1 Oxidation (M) _EDLTEIRDM(ox)LLANK_ EDLTEIRDM(1)LLANK EDLTEIRDM(40.71)LLANK 0 1 1 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.9303 2 838.929819 1675.84509 66240.7 0.7568 0.0006349 -0.056145 -4.7102E-05 0.70066 0.0005878 838.930106194513 847.941184751945 94.456 0.8372 94.456 94.033 94.87 0 278 77 7 0 0 0 0.006145 1 57193 40.715 40.715 1 1.5084 1.8127 0 74748000 35483000 39265000 7056 345 2673 2743 11014 11014 257 EDLTEIRDMLLANK 14 1 1 Oxidation (M) _EDLTEIRDM(ox)LLANK_ EDLTEIRDM(1)LLANK EDLTEIRDM(96.23)LLANK 0 1 1 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.9304 2 838.929819 1675.84509 65158.09 0.70089 0.000588 0.2409 0.0002021 0.94179 0.00079009 838.930165118522 847.941316695067 93.536 0.85076 93.536 93.141 93.992 0 411 75 8 0 0 0 2.4921E-05 3 57895 96.229 96.229 1 1.4405 1.6968 0 92631000 37821000 54809000 7057 345 2673 2743 11015;11016;11017 11017 257 EDLTEIRDMLLANK 14 1 1 Oxidation (M) _EDLTEIRDM(ox)LLANK_ EDLTEIRDM(1)LLANK EDLTEIRDM(82.07)LLANK 0 1 1 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.6307 3 559.622305 1675.84509 80626.27 0.61816 0.00034593 -0.095878 -5.3655E-05 0.52228 0.00029228 559.622212634432 565.629810290788 93.545 1.0257 93.545 93.123 94.148 0 460 90 10 0 0 0 2.9777E-05 1 57844 82.069 82.069 1 1.3128 1.5525 0 172990000 77265000 95726000 7058 345 2673 2743 11018 11018 257 EDLVVAPAGITLK 13 1 0 Unmodified _EDLVVAPAGITLK_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8599 2 663.387385 1324.76022 75714.65 0.68945 0.00045737 -1.0763 -0.00071402 -0.38688 -0.00025665 663.886954738503 667.394275103898 104.98 0.60281 104.98 104.71 105.31 0 163 48 5 0 0 0 0.016754 1 64925 57.348 57.348 1 0.92256 0.95162 0 10921000 5344200 5576400 7059 1282 2674 2744 11019 11019 EDLVVAPAGITLK 13 1 0 Unmodified _EDLVVAPAGITLK_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3959 2 663.387385 1324.76022 75903.95 0.71159 0.00047206 -0.28243 -0.00018736 0.42917 0.00028471 663.38725242176 667.394240352498 104.26 0.56473 104.26 103.98 104.55 0 158 45 5 0 0 0 0.01031 1 66034 41.824 41.824 1 1.2211 1.2698 0 9945000 4291400 5653500 7060 1282 2674 2744 11020 11020 EDLWILQDQCR 11 0 1 Unmodified _EDLWILQDQCR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.3542 2 738.351008 1474.68746 NaN NaN NaN -0.25391 -0.00018748 NaN NaN NaN NaN 99.456 0.12292 99.456 99.376 99.499 0 0 0 0 0.035342 1 60878 48.602 32.028 1 NaN NaN 0 1653700 0 1653700 7061 1565 2675 2745 11021 11021 EDLWILQDQCR 11 0 1 Unmodified _EDLWILQDQCR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3731 2 738.351008 1474.68746 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.992 1 98.992 98.492 99.492 0 0 0 0 0.0056516 1 62001 64.297 39.915 1 7062 1565 2675 2745 11022 11022 EDLWILQDQCRDPAVSVR 18 0 2 Unmodified _EDLWILQDQCRDPAVSVR_ 0 0 1 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.4115 3 734.032027 2199.07425 71490.32 0.72703 0.00053366 0.42111 0.00030911 1.1481 0.00084277 734.032210798656 741.038726993924 111.32 0.28386 111.32 111.19 111.47 0 29 12 4 0 0 0 0.038534 1 63524 26.075 26.075 1 2.3865 2.1585 0 3637700 1623900 2013800 7063 1565 2676 2746 11023 11023 EDMTYAVR 8 0 1 Oxidation (M) _EDM(ox)TYAVR_ EDM(1)TYAVR EDM(66.68)TYAVR 0 1 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.7238 2 500.723849 999.433146 85504.41 0.079267 3.9691E-05 0.23857 0.00011946 0.31784 0.00015915 500.723889641909 505.728000533981 23.454 0.64703 23.454 23.103 23.75 0 71 30 5 0 0 0 0.0062231 1 9419 66.682 54.961 1 1.0323 1.0602 0 19431000 10588000 8842300 7064 1333 2677 2747 11024 11024 1007 EDMTYAVR 8 0 1 Oxidation (M) _EDM(ox)TYAVR_ EDM(1)TYAVR EDM(66.68)TYAVR 0 1 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.7281 2 500.723849 999.433146 NaN NaN NaN 0.03686 1.8457E-05 NaN NaN NaN NaN 23.566 0.32554 23.566 23.443 23.769 0 0 0 0 0.0055718 1 9449 66.682 54.961 1 NaN NaN 0 18075000 0 18075000 7065 1333 2677 2747 11025 11025 1007 EDNIGNQLLR 10 0 1 Unmodified _EDNIGNQLLR_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.3113 2 586.306926 1170.5993 82698.67 0.3947 0.00023142 0.71351 0.00041833 1.1082 0.00064975 586.307307089996 591.311323300062 64.496 0.85796 64.496 64.101 64.959 0 197 74 4 0 0 0 1.1055E-05 3 37106 104.44 93.074 1 0.7096 0.73387 0 23439000 14192000 9246300 7066 655 2678 2748 11026;11027;11028 11027 EDNIGNQLLR 10 0 1 Unmodified _EDNIGNQLLR_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.3082 2 586.306926 1170.5993 NaN NaN NaN 0.33986 0.00019926 NaN NaN NaN NaN 63.347 0.79893 63.347 62.985 63.784 0 0 0 0 4.1431E-11 2 37387 119.29 74.209 1 NaN NaN 0 12481000 12481000 0 7067 655 2678 2748 11029;11030 11030 EDPNLVPSISNK 12 1 0 Unmodified _EDPNLVPSISNK_ 0 0 0 P10606;Q6FHM4 P10606 P10606 COX5B Cytochrome c oxidase subunit 5B, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.8488 2 656.840799 1311.66705 73421.24 0.69433 0.00045606 -0.22156 -0.00014553 0.47276 0.00031053 656.839823582817 660.847862003957 68.537 0.83961 68.537 68.229 69.069 0 225 69 6 0 0 0 4.0239E-06 2 40776 110.84 104.97 1 1.3311 1.4927 0 113580000 55275000 58306000 7068 1465 2679 2749 11031;11032 11032 EDQLLCTDCYSNEYSSK 17 1 0 Unmodified _EDQLLCTDCYSNEYSSK_ 0 0 0 I0CE67;Q6I9R8;Q2XQU9;J3KNW4;A0A0A0MSG2;Q14192;Q2TSB7;Q53QP3 I0CE67 I0CE67 FHL2;AAG11 Four and a half LIM domains protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1056.9353 2 1056.43025 2110.84595 60042.13 0.65148 0.00068825 -0.33549 -0.00035442 0.316 0.00033383 1056.43015603146 1060.437163034 70.711 0.49384 70.711 70.51 71.004 0 155 39 6 0 0 0 1.7392E-07 4 41201 98.531 98.531 1 2.2635 2.3743 0 15238000 5764800 9473600 7069 478 2680 2750 11033;11034;11035;11036 11035 EDQLLCTDCYSNEYSSK 17 1 0 Unmodified _EDQLLCTDCYSNEYSSK_ 0 0 0 I0CE67;Q6I9R8;Q2XQU9;J3KNW4;A0A0A0MSG2;Q14192;Q2TSB7;Q53QP3 I0CE67 I0CE67 FHL2;AAG11 Four and a half LIM domains protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1060.4354 2 1056.43025 2110.84595 60641.45 0.52432 0.0005539 -0.36301 -0.00038349 0.16131 0.00017041 1056.93159045305 1060.43722187088 69.788 0.53732 69.788 69.466 70.003 0 150 43 5 0 0 0 1.4136E-12 3 41454 116.51 116.51 1 1.8963 1.9531 0 11583000 3704500 7878600 7070 478 2680 2750 11037;11038;11039 11037 EDQPAVPGETQGDSYFTGK 19 1 0 Unmodified _EDQPAVPGETQGDSYFTGK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1013.4562 2 1013.45544 2024.89633 60852.82 0.25652 0.00025997 -0.10826 -0.00010971 0.14826 0.00015025 1013.95682315358 1017.46292355596 73.501 0.66406 73.501 73.201 73.865 0 372 61 8 0 0 0 4.7591E-08 2 43022 90.707 88.728 1 0.87709 0.96664 0 55743000 29635000 26109000 7071 1827 2681 2751 11040;11041 11041 EDQPAVPGETQGDSYFTGK 19 1 0 Unmodified _EDQPAVPGETQGDSYFTGK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1013.4544 2 1013.45544 2024.89633 60872.96 0.32162 0.00032594 -0.22328 -0.00022629 0.098336 9.9659E-05 1013.4551456377 1017.96418917839 72.57 0.63307 72.57 72.268 72.901 -7.6294E-06 349 56 9 0 0 0 2.9448E-09 2 43467 99.481 97.239 1 0.87771 0.99022 0 66215000 34831000 31384000 7072 1827 2681 2751 11042;11043 11043 EDQPAVPGETQGDSYFTGK 19 1 0 Unmodified _EDQPAVPGETQGDSYFTGK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1013.957 2 1013.45544 2024.89633 60734.45 0.24958 0.00025294 -0.015567 -1.5776E-05 0.23401 0.00023716 1013.45547728713 1017.46266710682 84.104 0.7193 84.104 83.761 84.48 0 442 59 10 0 0 0 0.0059054 1 45759 30.905 30.905 1 1.2979 1.0587 0 32589000 14066000 18523000 7073 1827 2681 2751 11044 11044 EDQPAVPGETQGDSYFTGK 19 1 0 Unmodified _EDQPAVPGETQGDSYFTGK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1013.456 2 1013.45544 2024.89633 60448.54 0.38812 0.00039334 -0.086194 -8.7354E-05 0.30193 0.00030599 1013.95696612518 1017.46257348113 84.402 0.75715 84.402 84.086 84.843 -7.6294E-06 397 55 10 0 0 0 0.00035476 2 45137 43.03 43.03 1 1.2765 1.0608 0 37507000 16512000 20996000 7074 1827 2681 2751 11045;11046 11046 EDQPAVPGETQGDSYFTGKK 20 2 0 Unmodified _EDQPAVPGETQGDSYFTGKK_ 0 0 1 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 724.3483 3 718.671041 2152.99129 71348.55 0.63519 0.00045649 -0.13041 -9.3725E-05 0.50478 0.00036277 719.005011831193 724.013811391739 68.377 0.49291 68.376 68.145 68.638 -7.6294E-06 212 36 8 0 0 0 0.0002334 2 35763 35.703 35.703 1 1.419 1.2159 0 8578900 3357300 5221600 7075 1827 2682 2752 11047;11048 11048 EDQPAVPGETQGDSYFTGKK 20 2 0 Unmodified _EDQPAVPGETQGDSYFTGKK_ 0 0 1 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.014 3 718.671041 2152.99129 71600.77 0.62297 0.00044771 0.031293 2.2489E-05 0.65426 0.0004702 718.67066214004 724.01393180988 69.036 0.49983 69.036 68.759 69.259 0 213 35 8 0 0 0 0.0020982 1 35279 24.227 24.227 1 1.3805 1.169 0 6638000 2819700 3818400 7076 1827 2682 2752 11049 11049 EDQQTVLKPQFYEIK 15 2 0 Unmodified _EDQQTVLKPQFYEIK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.995 3 622.659636 1864.95708 76762.81 0.79549 0.00049532 -0.1902 -0.00011843 0.6053 0.00037689 622.993778591832 628.336821570901 81.805 0.78 81.805 81.476 82.256 0 259 67 6 0 0 0 0.0032925 1 48758 36.193 36.193 1 1.1772 1.396 0 27353000 11176000 16176000 7077 2000 2683 2753 11050 11050 EDQQTVLKPQFYEIK 15 2 0 Unmodified _EDQQTVLKPQFYEIK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.6601 3 622.659636 1864.95708 76507.67 0.48928 0.00030466 0.24746 0.00015408 0.73674 0.00045874 622.659787318866 628.002571870481 80.673 0.92038 80.673 80.286 81.206 0 272 76 6 0 0 0 0.00016398 1 49157 59.261 59.261 1 1.0777 1.2481 0 53847000 25476000 28371000 7078 2000 2683 2753 11051 11051 EDQQTVLKPQFYEIK 15 2 0 Unmodified _EDQQTVLKPQFYEIK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.9943 3 622.659636 1864.95708 76085.08 0.59077 0.00036785 0.23385 0.00014561 0.82462 0.00051346 622.994151317482 628.002616088205 93.369 1.0116 93.369 93.058 94.069 0 366 65 10 0 0 0 0.037783 1 52094 21.534 21.534 1 1.6348 1.3938 0 20328000 7591700 12736000 7079 2000 2683 2753 11052 11052 EDQQTVLKPQFYEIK 15 2 0 Unmodified _EDQQTVLKPQFYEIK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 942.0009 2 933.485816 1864.95708 65205.67 0.63006 0.00058816 0.67588 0.00063092 1.3059 0.0012191 933.486708857166 941.500421573352 93.39 0.53216 93.39 93.17 93.702 0 131 33 6 0 0 0 0.011296 1 52105 45.891 45.891 1 1.7442 1.5058 0 4853100 1833500 3019600 7080 2000 2683 2753 11053 11053 EDQQTVLKPQFYEIK 15 2 0 Unmodified _EDQQTVLKPQFYEIK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.9941 3 622.659636 1864.95708 76486.3 0.43174 0.00026883 0.091276 5.6834E-05 0.52302 0.00032566 622.659738643912 628.002585158405 93.221 0.98054 93.221 92.896 93.877 0 352 63 10 0 0 0 0.001886 2 51110 40.237 40.237 1 1.6373 1.3872 0 17335000 6277000 11058000 7081 2000 2683 2753 11054;11055 11055 EDQQTVLKPQFYEIK 15 2 0 Unmodified _EDQQTVLKPQFYEIK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 941.4984 2 933.485816 1864.95708 64451.68 0.44218 0.00041277 0.40694 0.00037987 0.84912 0.00079265 933.485860900031 941.500225452368 93.256 0.55183 93.256 92.967 93.519 -7.6294E-06 161 33 7 0 0 0 0.044307 1 51152 35.774 35.774 1 1.7839 1.5281 0 4229200 1337300 2891900 7082 2000 2683 2753 11056 11056 EDQSILCTGESGAGK 15 1 0 Unmodified _EDQSILCTGESGAGK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q5BKV1;E7ERA5;P35580;Q7Z406;M0QY43 A0A024R1N1;P35580;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH10;MYH14 Myosin-9;Myosin-11;Myosin-10;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.8601 2 776.351402 1550.68825 68465.83 0.91382 0.00070945 -0.44251 -0.00034354 0.47131 0.0003659 776.351284441992 780.3584136587 44.736 0.61322 44.736 44.425 45.038 0 247 55 7 0 0 0 1.0064E-07 2 23953 110.64 106.02 1 1.4558 1.5947 0 52388000 23010000 29378000 7083 81;1544;1875 2684 2754 11057;11058 11058 EDQSILCTGESGAGK 15 1 0 Unmodified _EDQSILCTGESGAGK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q5BKV1;E7ERA5;P35580;Q7Z406;M0QY43 A0A024R1N1;P35580;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH10;MYH14 Myosin-9;Myosin-11;Myosin-10;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.3582 2 776.351402 1550.68825 67414.88 1.321 0.0010256 -0.34834 -0.00027044 0.9727 0.00075516 776.351516381687 780.358231724222 43.93 0.49355 43.93 43.735 44.228 0 224 42 8 0 0 0 2.4122E-38 2 23984 164.9 158.52 1 1.3731 1.534 0 89481000 36796000 52685000 7084 81;1544;1875 2684 2754 11059;11060 11060 EDQSILCTGESGAGK 15 1 0 Unmodified _EDQSILCTGESGAGK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q5BKV1;E7ERA5;P35580;Q7Z406;M0QY43 A0A024R1N1;P35580;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH10;MYH14 Myosin-9;Myosin-11;Myosin-10;Myosin-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.3566 2 776.351402 1550.68825 68485.61 0.41922 0.00032546 1.2598 0.00097804 1.679 0.0013035 776.350804373428 780.358416088969 51.717 0.87283 51.717 51.329 52.201 0 198 71 5 0 0 0 0.0044428 1 25349 39.219 32.53 1 3.3127 2.6599 0 7987100 1676000 6311200 7085 81;1544;1875 2684 2754 11061 11061 EDQSILCTGESGAGK 15 1 0 Unmodified _EDQSILCTGESGAGK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q5BKV1;E7ERA5;P35580;Q7Z406;M0QY43 A0A024R1N1;P35580;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH10;MYH14 Myosin-9;Myosin-11;Myosin-10;Myosin-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.3585 2 776.351402 1550.68825 68317.37 0.43311 0.00033624 0.15849 0.00012304 0.5916 0.00045929 776.351134836854 780.358460212348 52.135 0.60289 52.135 51.79 52.392 0 219 45 8 0 0 0 1.1173E-05 2 25102 92.112 92.112 1 3.0182 2.4689 0 8372200 2065100 6307100 7086 81;1544;1875 2684 2754 11062;11063 11062 EDQTEYLEER 10 0 1 Unmodified _EDQTEYLEER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;G3V2J8;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.2928 2 656.288596 1310.56264 75249.16 0.6285 0.00041248 0.016254 1.0667E-05 0.64476 0.00042315 656.2886063354 661.292722149009 39.601 0.83185 39.601 39.193 40.024 3.8147E-06 449 68 10 0 0 0 3.8868E-16 2 20378 154.01 137.47 1 2.2601 2.678 0 480200000 148480000 331710000 7087 379;1348;1799 2685 2755 11064;11065 11065 EDQTEYLEER 10 0 1 Unmodified _EDQTEYLEER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;G3V2J8;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.2886 2 656.288596 1310.56264 74490.59 0.59071 0.00038768 0.21889 0.00014366 0.8096 0.00053133 656.288735095485 661.292882990319 38.577 0.79013 38.577 38.303 39.093 0 417 67 9 0 0 0 2.6958E-16 2 20225 156.83 140.29 1 2.2358 2.6143 0 608980000 173140000 435840000 7088 379;1348;1799 2685 2755 11066;11067 11067 EDQTEYLEER 10 0 1 Unmodified _EDQTEYLEER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;G3V2J8;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.2932 2 656.288596 1310.56264 74218.45 0.58183 0.00038185 -0.049945 -3.2778E-05 0.53189 0.00034907 656.288488312217 661.292707165616 45.573 0.74969 45.573 45.269 46.019 3.8147E-06 379 56 10 0 0 0 0.00086545 2 21699 79.974 79.974 1 1.4405 1.2374 0 43555000 17489000 26066000 7089 379;1348;1799 2685 2755 11068;11069 11068 EDQTEYLEER 10 0 1 Unmodified _EDQTEYLEER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;G3V2J8;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.293 2 656.288596 1310.56264 75006.27 0.61405 0.00040299 -0.011604 -7.6158E-06 0.60244 0.00039538 656.28862339386 661.292650223526 45.825 0.69788 45.825 45.534 46.231 0 308 47 10 0 0 0 1.399E-09 2 21319 132.01 124.36 1 1.4242 1.2425 0 51462000 21689000 29773000 7090 379;1348;1799 2685 2755 11070;11071 11070 EDSAPPSSVAR 11 0 1 Unmodified _EDSAPPSSVAR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.2744 2 558.27001 1114.52547 82622.24 0.4024 0.00022465 -0.59438 -0.00033182 -0.19198 -0.00010718 558.269763449841 563.273949992025 20.491 0.58651 20.491 20.176 20.763 0 60 24 5 0 0 0 0.018526 1 6912 44.753 29.091 1 0.97992 0.99821 0 6996300 3251600 3744700 7091 1183 2686 2756 11072 11072 EDSAVFYELK 10 1 0 Unmodified _EDSAVFYELK_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.7933 2 600.792786 1199.57102 80953.1 0.52647 0.0003163 0.29116 0.00017493 0.81763 0.00049122 600.792741135701 604.800326220842 80.643 0.64746 80.643 80.286 80.933 0 177 52 5 0 0 0 0.017179 3 48991 47.96 47.96 1 0.89483 0.90492 0 28838000 14748000 14090000 7092 63 2687 2757 11073;11074;11075 11074 EDSAYGSQSVEQEAEK 16 1 0 Unmodified _EDSAYGSQSVEQEAEK_ 0 0 0 Q00653 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 882.8859 2 878.879035 1755.74352 NaN NaN NaN -0.11747 -0.00010324 NaN NaN NaN NaN 34.363 0.32491 34.363 34.235 34.56 0 0 0 0 1.616E-06 1 17180 88.021 85.154 1 NaN NaN 0 2373900 0 2373900 7093 1674 2688 2758 11076 11076 EDSAYGSQSVEQEAEK 16 1 0 Unmodified _EDSAYGSQSVEQEAEK_ 0 0 0 Q00653 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.8853 2 878.879035 1755.74352 NaN NaN NaN 0.10025 8.811E-05 NaN NaN NaN NaN 33.686 0.30516 33.686 33.525 33.83 0 0 0 0 2.0115E-06 1 16875 86.772 82.072 1 NaN NaN 0 6058600 0 6058600 7094 1674 2688 2758 11077 11077 EDSGMVPLIIPVSVPVR 17 0 1 Oxidation (M) _EDSGM(ox)VPLIIPVSVPVR_ EDSGM(1)VPLIIPVSVPVR EDSGM(44.3)VPLIIPVSVPVR 0 1 0 A0A1C7CYX1;A0A0A0MSU2;A0PJD3;A0A024R689;Q6PJG2;H7C1L3 A0A1C7CYX1 A0A1C7CYX1 ELMSAN1;C14orf43 ELM2 and SANT domain-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.4995 2 912.500412 1822.98627 NaN NaN NaN 0.18966 0.00017307 NaN NaN NaN NaN 124.36 0.31988 124.36 124.24 124.56 0 0 0 0 0.0028649 1 80728 44.299 38.454 1 NaN NaN 0 2706200 2706200 0 7095 638 2689 2759 11078 11078 494 EDSGSVPSTGPSQGTPISLK 20 1 0 Unmodified _EDSGSVPSTGPSQGTPISLK_ 0 0 0 D6W625;Q13111 D6W625 D6W625 CHAF1A Chromatin assembly factor 1 subunit A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 976.4887 2 972.481459 1942.94836 63672.34 0.17984 0.00017489 0.34726 0.00033771 0.5271 0.00051259 972.481771032869 976.990619580887 72.182 0.34491 72.182 72.006 72.35 0 84 26 5 0 0 0 0.0035006 1 42137 37.594 37.594 1 0.84622 0.82998 0 8829500 4887300 3942200 7096 1204 2690 2760 11079 11079 EDSGSVPSTGPSQGTPISLK 20 1 0 Unmodified _EDSGSVPSTGPSQGTPISLK_ 0 0 0 D6W625;Q13111 D6W625 D6W625 CHAF1A Chromatin assembly factor 1 subunit A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 972.4817 2 972.481459 1942.94836 63456.13 0.13218 0.00012854 -0.22901 -0.00022271 -0.096832 -9.4168E-05 972.481327939711 976.487947635358 71.156 0.34835 71.156 71.004 71.352 0 76 24 5 0 0 0 8.0209E-05 2 42532 45.115 45.115 1 0.95444 0.99211 0 11151000 6665000 4486200 7097 1204 2690 2760 11080;11081 11080 EDSGSVPSTGPSQGTPISLK 20 1 0 Unmodified _EDSGSVPSTGPSQGTPISLK_ 0 0 0 D6W625;Q13111 D6W625 D6W625 CHAF1A Chromatin assembly factor 1 subunit A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 976.4888 2 972.481459 1942.94836 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.057 1 71.057 70.557 71.557 0 0 0 0 0.02353 1 42531 39.424 33.701 1 7098 1204 2690 2760 11082 11082 EDSHPFDLGLYNEAVK 16 1 0 Unmodified _EDSHPFDLGLYNEAVK_ 0 0 0 B5MC59;A4D105;P35244 B5MC59 B5MC59 RPA3 Replication protein A 14 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.2952 3 611.959974 1832.85809 80112.19 0.74558 0.00045627 0.51944 0.00031788 1.265 0.00077415 612.294907214497 614.631192961191 91.605 0.51951 91.605 91.415 91.934 0 168 44 5 0 0 0 0.00011646 2 56787 51.577 51.577 1 0.80342 0.85396 0 20599000 12298000 8300900 7099 661 2691 2761 11083;11084 11083 EDSLAQAGETINALK 15 1 0 Unmodified _EDSLAQAGETINALK_ 0 0 0 A4D218;Q9Y6D9;C9JTA2;C9K086;C9JIR0 A4D218 A4D218 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.4005 2 780.399209 1558.78387 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.567 1 87.567 87.067 88.067 0 0 0 0 0.010354 1 53971 47.559 37.904 1 7100 668 2692 2762 11085 11085 EDSLDSVLFLK 11 1 0 Unmodified _EDSLDSVLFLK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3344 2 633.334818 1264.65508 78101.77 0.56227 0.00035611 0.24917 0.00015781 0.81144 0.00051391 633.836418545112 637.342129325545 115.41 0.54004 115.41 115.1 115.64 0 135 35 6 0 0 0 0.00019291 1 73352 93.111 64.024 1 0.64933 0.66376 0 10498000 6275300 4222700 7101 1718 2693 2763 11086 11086 EDSLDSVLFLK 11 1 0 Unmodified _EDSLDSVLFLK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3347 2 633.334818 1264.65508 77767.18 0.7806 0.00049438 0.01081 6.8461E-06 0.79141 0.00050123 633.334673986993 637.342064057817 114.81 0.53615 114.81 114.56 115.09 0 139 33 6 0 0 0 7.3902E-08 3 74774 113.62 80.359 1 0.86126 0.86435 0 13745000 7721600 6023700 7102 1718 2693 2763 11087;11088;11089 11088 EDSLDSVLFLK 11 1 0 Unmodified _EDSLDSVLFLK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.3351 2 633.334818 1264.65508 77535.48 0.69272 0.00043873 0.37037 0.00023457 1.0631 0.0006733 633.335183486502 637.342267122559 126.77 0.50864 126.77 126.47 126.98 7.6294E-06 89 19 6 0 0 0 0.0005685 1 76291 74.162 54.375 1 0.78849 0.63504 0 2812500 1741300 1071100 7103 1718 2693 2763 11090 11090 EDSLDSVLFLK 11 1 0 Unmodified _EDSLDSVLFLK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.3351 2 633.334818 1264.65508 78971.53 0.64011 0.0004054 0.1918 0.00012148 0.83191 0.00052688 633.33520737222 637.341904011861 126.61 0.49371 126.61 126.34 126.84 0 78 20 6 0 0 0 0.0066279 1 75263 54.066 38.806 1 0.79943 0.63659 0 3102100 1528300 1573700 7104 1718 2693 2763 11091 11091 EDSQRPGAHLTVK 13 1 1 Unmodified _EDSQRPGAHLTVK_ 0 0 1 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;B4DP35;F8W646 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.3876 2 719.375872 1436.73719 72038.55 0.36206 0.00026046 0.35004 0.00025181 0.7121 0.00051227 719.375904483115 728.387336149804 20.333 0.1885 20.333 20.205 20.393 0 29 6 6 0 0 0 1.4788E-05 2 6771 109.24 109.24 1 2.0982 2.506 0 52556000 15903000 36653000 7105 317 2694 2764 11092;11093 11092 EDSQRPGAHLTVK 13 1 1 Unmodified _EDSQRPGAHLTVK_ 0 0 1 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;B4DP35;F8W646 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.9271 3 479.919673 1436.73719 86610.88 -0.17282 -8.2938E-05 -0.17233 -8.2702E-05 -0.34514 -0.00016564 479.919868554803 485.926967561654 20.334 0.64787 20.334 20.144 20.792 0 96 26 8 0 0 0 0.0015116 2 6833 54.898 54.898 1 2.1643 2.6136 0 159900000 49673000 110230000 7106 317 2694 2764 11094;11095 11095 EDSQRPGAHLTVK 13 1 1 Unmodified _EDSQRPGAHLTVK_ 0 0 1 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;B4DP35;F8W646 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.9195 3 479.919673 1436.73719 86775.01 0.2003 9.6128E-05 -0.48663 -0.00023354 -0.28633 -0.00013741 479.919550183077 485.926858741631 19.927 0.43891 19.927 19.785 20.224 0 88 16 9 0 0 0 6.2453E-05 2 6249 80.746 80.746 1 2.4166 2.8556 0 153390000 44372000 109020000 7107 317 2694 2764 11096;11097 11096 EDSQRPGAHLTVK 13 1 1 Unmodified _EDSQRPGAHLTVK_ 0 0 1 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;B4DP35;F8W646 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.3878 2 719.375872 1436.73719 71439.85 0.59613 0.00042884 -0.17281 -0.00012432 0.42332 0.00030452 719.375443367069 728.386962214677 19.945 0.28928 19.945 19.814 20.103 0 46 11 7 0 0 0 2.4582E-06 2 6273 115.18 115.18 1 2.38 2.7401 0 27407000 8054600 19353000 7108 317 2694 2764 11098;11099 11099 EDSQRPGAHLTVK 13 1 1 Unmodified _EDSQRPGAHLTVK_ 0 0 1 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;B4DP35;F8W646 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.3883 2 719.375872 1436.73719 70071.32 0.28553 0.0002054 -0.28945 -0.00020823 -0.0039258 -2.8241E-06 719.375912804965 728.387345875366 21.509 0.23918 21.509 21.383 21.622 0 33 7 7 0 0 0 0.021567 1 6541 48.948 34.454 1 1.5066 1.3198 0 2399600 1083900 1315700 7109 317 2694 2764 11100 11100 EDSVKPGAHLTVK 13 2 0 Unmodified _EDSVKPGAHLTVK_ 0 0 1 P51991;B4E3E6;B4DDB6;Q65ZQ3 P51991 P51991 HNRNPA3;HNRPA3;D10S102 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.8915 2 690.877716 1379.74088 73406.76 0.26931 0.00018606 -0.33211 -0.00022945 -0.062796 -4.3384E-05 690.877528598783 699.392815017823 24.785 0.19076 24.785 24.708 24.899 0 27 9 4 0 0 0 0.0013069 1 10528 36.585 26.581 1 1.5734 1.8345 0 11925000 3903600 8021900 7110 1598 2695 2765 11101 11101 EDSVKPGAHLTVK 13 2 0 Unmodified _EDSVKPGAHLTVK_ 0 0 1 P51991;B4E3E6;B4DDB6;Q65ZQ3 P51991 P51991 HNRNPA3;HNRPA3;D10S102 Heterogeneous nuclear ribonucleoprotein A3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2631 3 460.920903 1379.74088 NaN NaN NaN -0.41758 -0.00019247 NaN NaN NaN NaN 24.039 0.31264 24.039 23.844 24.156 0 0 0 0 0.019731 1 9812 47.987 38.799 1 NaN NaN 0 32088000 0 32088000 7111 1598 2695 2765 11102 11102 EDTEEYNLR 9 0 1 Unmodified _EDTEEYNLR_ 0 0 0 P51991;B4E3E6;B4DDB6;Q65ZQ3 P51991 P51991 HNRNPA3;HNRPA3;D10S102 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.7598 2 584.759475 1167.5044 81196.55 1.0699 0.00062562 -0.70708 -0.00041347 0.36279 0.00021214 584.75899921216 589.763290138822 33.291 0.86051 33.291 32.841 33.701 0 259 85 4 0 0 0 0.00045646 2 16575 98.997 87.775 1 1.6218 1.6824 0 22671000 9276100 13394000 7112 1598 2696 2766 11103;11104 11104 EDTEEYNLR 9 0 1 Unmodified _EDTEEYNLR_ 0 0 0 P51991;B4E3E6;B4DDB6;Q65ZQ3 P51991 P51991 HNRNPA3;HNRPA3;D10S102 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.7592 2 584.759475 1167.5044 80255.79 0.46996 0.00027481 0.056129 3.2822E-05 0.52609 0.00030764 584.759384677358 589.763736602578 38.502 0.77899 38.502 37.955 38.734 3.8147E-06 229 58 6 0 0 0 0.002701 1 17343 73.665 57.125 1 0.84844 0.72241 0 5449600 2745200 2704500 7113 1598 2696 2766 11105 11105 EDTEEYNLR 9 0 1 Unmodified _EDTEEYNLR_ 0 0 0 P51991;B4E3E6;B4DDB6;Q65ZQ3 P51991 P51991 HNRNPA3;HNRPA3;D10S102 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.7593 2 584.759475 1167.5044 80138.87 0.25654 0.00015001 -0.038367 -2.2435E-05 0.21817 0.00012758 584.759328143883 589.763612782905 38.533 0.75891 38.533 38.093 38.852 0 242 58 7 0 0 0 0.0018606 1 16986 79.906 71.374 1 0.82782 0.732 0 3950500 1915600 2034900 7114 1598 2696 2766 11106 11106 EDTFFYSLVYDPSLK 15 1 0 Unmodified _EDTFFYSLVYDPSLK_ 0 0 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8 E7EQY4 E7EQY4 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.441 2 912.440543 1822.86653 NaN NaN NaN -0.077639 -7.0841E-05 NaN NaN NaN NaN 125.34 0.58225 125.34 125.07 125.65 0 0 0 0 1.2785E-05 1 81388 90.614 82.482 1 NaN NaN 0 4994200 4994200 0 7115 1221 2697 2767 11107 11107 EDTFFYSLVYDPSLK 15 1 0 Unmodified _EDTFFYSLVYDPSLK_ 0 0 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8 E7EQY4 E7EQY4 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 912.4401 2 912.440543 1822.86653 65037.93 1.1398 0.00104 0.21108 0.00019259 1.3509 0.0012326 912.440582287452 916.447860790115 124.95 0.4767 124.95 124.72 125.19 7.6294E-06 160 34 6 0 0 0 2.3703E-07 2 83155 107.85 107.85 1 0.71988 0.75373 0 10566000 6407200 4158900 7116 1221 2697 2767 11108;11109 11109 EDTLEFLIK 9 1 0 Unmodified _EDTLEFLIK_ 0 0 0 B3KMS0;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.3002 2 554.300247 1106.58594 80639.83 0.65461 0.00036285 -0.028541 -1.582E-05 0.62607 0.00034703 554.300133377772 558.307206525639 107.89 1.1193 107.89 107.47 108.59 0 473 84 9 0 0 0 0.00085417 2 67644 93.429 77.161 1 0.92553 1.0516 0 163590000 80986000 82603000 7117 908 2698 2768 11110;11111 11111 EDTLEFLIK 9 1 0 Unmodified _EDTLEFLIK_ 0 0 0 B3KMS0;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.3001 2 554.300247 1106.58594 81298.27 0.77469 0.00042941 -0.20383 -0.00011298 0.57086 0.00031643 554.300054376837 558.307144844415 107.27 1.1363 107.27 106.75 107.89 0 492 79 12 0 0 0 0.0036023 6 68750 71.379 53.049 1 0.9102 1.0495 0 185130000 94343000 90786000 7118 908 2698 2768 11112;11113;11114;11115;11116;11117 11114 EDTLEFLIK 9 1 0 Unmodified _EDTLEFLIK_ 0 0 0 B3KMS0;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.3076 2 554.300247 1106.58594 81363.55 0.75106 0.00041631 0.07032 3.8979E-05 0.82138 0.00045529 554.300300718906 558.307283503223 119.24 1.0313 119.24 118.93 119.97 0 210 46 8 0 0 0 0.010772 1 70418 58.981 48.994 1 1.5828 1.3368 0 57158000 20031000 37127000 7119 908 2698 2768 11118 11118 EDTLEFLIK 9 1 0 Unmodified _EDTLEFLIK_ 0 0 0 B3KMS0;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.8025 2 554.300247 1106.58594 80503.25 0.73071 0.00040503 -0.1649 -9.1404E-05 0.56581 0.00031363 554.300083603042 558.30717808859 119.02 1.1365 119.02 118.75 119.89 7.6294E-06 207 49 9 0 0 0 0.013178 3 69415 56.81 39.431 1 1.5688 1.3118 0 44321000 15783000 28538000 7120 908 2698 2768 11119;11120;11121 11121 EDVATWQQSSLSLR 14 0 1 Unmodified _EDVATWQQSSLSLR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.4133 2 810.404826 1618.7951 66533.6 0.88296 0.00071555 -0.1228 -9.9521E-05 0.76016 0.00061603 810.404423924778 815.409333037071 86.361 0.75095 86.361 86 86.751 -7.6294E-06 274 58 6 0 0 0 3.6498E-14 4 51829 126.19 119.96 1 0.91363 0.93953 0 25169000 13130000 12039000 7121 790 2699 2769 11122;11123;11124;11125 11124 EDVATWQQSSLSLR 14 0 1 Unmodified _EDVATWQQSSLSLR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.9053 2 810.404826 1618.7951 68120.13 0.67521 0.00054719 -0.31299 -0.00025365 0.36222 0.00029355 810.404727732281 815.409105008723 85.58 0.78367 85.58 85.137 85.92 0 277 60 7 0 0 0 1.9301E-09 2 52540 118.28 109.55 1 0.89911 0.97802 0 28765000 16102000 12663000 7122 790 2699 2769 11126;11127 11127 EDVATWQQSSLSLR 14 0 1 Unmodified _EDVATWQQSSLSLR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 815.4098 2 810.404826 1618.7951 67674.58 0.68403 0.00055434 -0.22501 -0.00018235 0.45902 0.00037199 810.404755435707 815.408895222003 98.831 0.77883 98.831 98.448 99.227 -7.6294E-06 244 46 8 0 0 0 0.0061555 3 55643 42.556 41.684 1 1.285 1.0527 0 12924000 5936900 6987100 7123 790 2699 2769 11128;11129;11130 11129 EDVATWQQSSLSLR 14 0 1 Unmodified _EDVATWQQSSLSLR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 815.41 2 810.404826 1618.7951 67112.05 0.68783 0.00055742 -0.070314 -5.6983E-05 0.61752 0.00050044 810.404957125581 815.409000764569 98.753 0.70807 98.753 98.343 99.051 0 224 42 8 0 0 0 0.01367 1 54771 35.737 33.42 1 1.3359 1.0976 0 13867000 5978000 7889100 7124 790 2699 2769 11131 11131 EDVFVHQTAIK 11 1 0 Unmodified _EDVFVHQTAIK_ 0 0 0 P67809;Q6PKI6;Q7KZ24;H0Y449;A0A0D9SEI8;Q59EB5;B2RCC2;Q9Y2T7;A0A024RAV4;A0A024RAQ1;P16989;Q96GD7 P67809;A0A024RAV4 P67809 YBX1;YBX3;YBX2;CSDA Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.8434 2 643.840602 1285.66665 75937.84 0.84614 0.00054478 0.074929 4.8242E-05 0.92107 0.00059302 643.840561953377 647.847711598136 45.398 0.57905 45.398 45.173 45.752 0 259 51 8 0 0 0 6.2398E-17 1 24835 157.75 124.48 1 2.3436 2.6463 0 128720000 39634000 89090000 7125 1657;310 2700 2770 11132 11132 EDVFVHQTAIK 11 1 0 Unmodified _EDVFVHQTAIK_ 0 0 0 P67809;Q6PKI6;Q7KZ24;H0Y449;A0A0D9SEI8;Q59EB5;B2RCC2;Q9Y2T7;A0A024RAV4;A0A024RAQ1;P16989;Q96GD7 P67809;A0A024RAV4 P67809 YBX1;YBX3;YBX2;CSDA Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.8411 2 643.840602 1285.66665 NaN NaN NaN 0.050624 3.2594E-05 NaN NaN NaN NaN 53.967 0.46328 53.967 53.7 54.163 0 0 0 0 3.2878E-16 1 26232 136.96 94.089 1 NaN NaN 0 2812100 2812100 0 7126 1657;310 2700 2770 11133 11133 EDVFVHQTAIK 11 1 0 Unmodified _EDVFVHQTAIK_ 0 0 0 P67809;Q6PKI6;Q7KZ24;H0Y449;A0A0D9SEI8;Q59EB5;B2RCC2;Q9Y2T7;A0A024RAV4;A0A024RAQ1;P16989;Q96GD7 P67809;A0A024RAV4 P67809 YBX1;YBX3;YBX2;CSDA Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.8486 2 643.840602 1285.66665 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.957 1 53.957 53.457 54.457 0 0 0 0 0.00054276 1 26267 74.841 44.277 1 7127 1657;310 2700 2770 11134 11134 EDVLEQR 7 0 1 Unmodified _EDVLEQR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 449.729 2 444.724707 887.43486 88207.47 0.18393 8.1799E-05 -0.036535 -1.6248E-05 0.1474 6.5551E-05 444.72463560454 449.728897102206 26.33 0.61904 26.33 26.145 26.764 0 179 38 6 0 0 0 0.010107 2 11803 125.08 51.158 1 0.71298 0.79365 0 78972000 46310000 32661000 7128 1389 2701 2771 11135;11136 11136 EDVLEQR 7 0 1 Unmodified _EDVLEQR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 444.724 2 444.724707 887.43486 88858.27 -0.11291 -5.0213E-05 -0.79195 -0.0003522 -0.90486 -0.00040241 444.724300142885 449.728669577274 29.23 0.4608 29.23 28.989 29.45 0 117 33 5 0 0 0 0.053742 1 11802 53.351 23.545 1 0.89524 0.7516 0 4245500 2100200 2145300 7129 1389 2701 2771 11137 11137 EDVLTLLLPVMGDSK 15 1 0 Oxidation (M) _EDVLTLLLPVM(ox)GDSK_ EDVLTLLLPVM(1)GDSK EDVLTLLLPVM(115.29)GDSK 0 1 0 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13041 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.452 2 823.439489 1644.86442 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.04 1 129.04 128.54 129.54 0 0 0 0 7.4463E-12 1 84154 115.29 76.653 1 7130 1707 2702 2772 11138 11138 1537 EDVLTLLLPVMGDSK 15 1 0 Oxidation (M) _EDVLTLLLPVM(ox)GDSK_ EDVLTLLLPVM(1)GDSK EDVLTLLLPVM(103.43)GDSK 0 1 0 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13041 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.9476 2 823.439489 1644.86442 NaN NaN NaN 0.76542 0.00063028 NaN NaN NaN NaN 128.71 0.2982 128.71 128.64 128.94 0 0 0 0 5.87E-08 1 86012 103.43 79.579 1 NaN NaN 0 5655100 0 5655100 7131 1707 2702 2772 11139 11139 1537 EDVNEAIR 8 0 1 Unmodified _EDVNEAIR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2396 2 473.235439 944.456324 89899.52 -0.03205 -1.5167E-05 -0.34883 -0.00016508 -0.38088 -0.00018025 473.235167020117 478.239399585648 27.151 0.35531 27.151 26.961 27.317 0 59 17 5 0 0 0 0.0065084 1 12387 86.953 51.073 1 1.2842 1.2856 0 16941000 7237400 9703500 7132 560 2703 2773 11140 11140 EDVNEAIR 8 0 1 Unmodified _EDVNEAIR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.239 2 473.235439 944.456324 90008.39 0.35095 0.00016608 -0.083427 -3.9481E-05 0.26752 0.0001266 473.235220773956 478.239503872552 26.732 0.25498 26.732 26.607 26.862 0 38 11 4 0 0 0 0.0092533 1 12168 75.109 35.006 1 1.0924 1.0835 0 15859000 8409800 7449600 7133 560 2703 2773 11141 11141 EDYQFDELNTEILNNLADQELQLNHLK 27 1 0 Unmodified _EDYQFDELNTEILNNLADQELQLNHLK_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1087.8652 3 1087.19663 3258.56807 58459.57 0.45661 0.00049643 -0.1942 -0.00021113 0.26241 0.00028529 1087.5304524447 1090.20216695939 132.07 0.63605 132.07 131.73 132.36 0 249 42 10 0 0 0 0.00051078 2 88412 28.665 28.665 1 0.88801 0.88771 0 14084000 7941600 6142400 7134 2143 2704 2774 11142;11143 11143 EEAAEHIPLLFFAFPSAK 18 1 0 Unmodified _EEAAEHIPLLFFAFPSAK_ 0 0 0 H7C3J0;B4DKE1;Q6NUM9;I0EZ74;H7BZ81 H7C3J0 H7C3J0 RETSAT All-trans-retinol 13,14-reductase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.6914 3 673.019164 2016.03566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.5 1 129.5 129 130 1.5259E-05 0 0 0 0.009787 1 86510 52.52 46.398 1 7135 988 2705 2775 11144 11144 EEAEALYHSK 10 1 0 Unmodified _EEAEALYHSK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.7805 2 588.78021 1175.54587 NaN NaN NaN -0.72809 -0.00042869 NaN NaN NaN NaN 22.008 0.39492 22.008 21.801 22.196 1.9073E-06 0 0 0 1.587E-15 1 8044 134.26 95.468 1 NaN NaN 0 108740000 108740000 0 + 7136 1166 2706 2776 11145 11145 EEAEALYHSK 10 1 0 Unmodified _EEAEALYHSK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.7803 2 588.78021 1175.54587 NaN NaN NaN -0.44633 -0.00026279 NaN NaN NaN NaN 24.414 0.48148 24.414 24.153 24.634 0 0 0 0 0.012172 1 8534 61.09 48.883 1 NaN NaN 0 5449700 5449700 0 + 7137 1166 2706 2776 11146 11146 EEAEETNVLPK 11 1 0 Unmodified _EEAEETNVLPK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.8116 2 629.811707 1257.60886 75082.61 0.68556 0.00043177 0.098624 6.2114E-05 0.78418 0.00049389 629.811507816406 633.818772385431 44.787 0.64513 44.787 44.482 45.127 -3.8147E-06 245 58 6 0 0 0 1.8777E-05 2 24023 105.4 94.435 1 1.109 1.2277 0 58060000 27775000 30285000 7138 1741 2707 2777 11147;11148 11148 EEAEETNVLPK 11 1 0 Unmodified _EEAEETNVLPK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8207 2 629.811707 1257.60886 74613.57 1.0975 0.00069121 -0.31446 -0.00019805 0.78303 0.00049316 629.811466205316 633.81861942665 43.954 0.52288 43.954 43.735 44.258 -3.8147E-06 207 45 6 0 0 0 3.8977E-08 2 23897 119.21 106.92 1 1.0101 1.1292 0 102860000 47610000 55248000 7139 1741 2707 2777 11149;11150 11149 EEAEETNVLPK 11 1 0 Unmodified _EEAEETNVLPK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.8113 2 629.811707 1257.60886 76486.6 0.23121 0.00014562 0.55515 0.00034964 0.78636 0.00049526 629.811690789658 633.819314958087 51.833 0.49812 51.833 51.539 52.037 0 159 40 6 0 0 0 0.027194 1 25557 40.331 35.88 1 1.3246 1.0504 0 4647000 2077300 2569700 7140 1741 2707 2777 11151 11151 EEAEETNVLPK 11 1 0 Unmodified _EEAEETNVLPK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.8184 2 629.811707 1257.60886 74177.94 0.40181 0.00025306 0.44621 0.00028103 0.84801 0.00053409 629.811555192005 633.818594633982 52.267 0.67409 52.267 51.927 52.602 3.8147E-06 158 37 6 0 0 0 0.053471 1 25187 34.222 34.222 1 1.3831 1.082 0 3718900 1707400 2011500 7141 1741 2707 2777 11152 11152 EEAENTLQSFR 11 0 1 Unmodified _EEAENTLQSFR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3168 2 662.312406 1322.61026 74605.77 0.7248 0.00048005 0.12688 8.4031E-05 0.85168 0.00056408 662.312548001435 667.316471548784 52.236 1.3866 52.236 51.65 53.037 0 531 93 9 0 0 0 8.784E-66 3 29795 219.7 183.14 1 1.3372 1.5473 0 271980000 118160000 153810000 7142 1457 2708 2778 11153;11154;11155 11154 EEAENTLQSFR 11 0 1 Unmodified _EEAENTLQSFR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.3134 2 662.312406 1322.61026 75419.44 0.46788 0.00030988 0.51834 0.00034331 0.98622 0.00065319 662.312626090827 667.316832524992 62.038 1.2754 62.038 61.463 62.738 3.8147E-06 507 103 7 0 0 0 4.1014E-05 1 31696 99.688 73.583 1 3.6561 3.0328 0 20615000 4109000 16506000 7143 1457 2708 2778 11156 11156 EEAENTLQSFR 11 0 1 Unmodified _EEAENTLQSFR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.3118 2 662.312406 1322.61026 74508.89 0.38095 0.00025231 0.33673 0.00022302 0.71768 0.00047533 662.3125101447 667.316639266244 62.772 1.2736 62.772 62.159 63.433 0 455 101 8 0 0 0 0.00032769 2 31415 87.149 61.044 1 3.6106 3.13 0 23748000 5256500 18492000 7144 1457 2708 2778 11157;11158 11157 EEAETPAEATGKPQR 15 1 1 Unmodified _EEAETPAEATGKPQR_ 0 0 1 Q8N9T8;A0A024R7C4;B4DUT2 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.5976 3 538.597036 1612.76928 81022.3 0.48047 0.00025878 0.041289 2.2238E-05 0.52176 0.00028102 538.597244921134 544.604330335609 17.719 0.24583 17.719 17.594 17.84 0 34 7 7 0 0 0 3.5659E-08 2 4829 111.12 105.08 1 0.83208 0.89874 0 10712000 5868800 4842900 7145 1916 2709 2779 11159;11160 11160 EEAETPAEATGKPQR 15 1 1 Unmodified _EEAETPAEATGKPQR_ 0 0 1 Q8N9T8;A0A024R7C4;B4DUT2 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.4028 2 807.391916 1612.76928 67669.28 0.58335 0.00047099 0.084281 6.8048E-05 0.66763 0.00053904 807.391588396567 816.40347452838 17.711 0.27656 17.711 17.617 17.894 -1.9073E-06 29 8 7 0 0 0 1.7751E-07 2 4835 130.56 116.1 1 0.63582 0.70577 0 7822100 4600100 3222100 7146 1916 2709 2779 11161;11162 11161 EEAETPAEATGKPQR 15 1 1 Unmodified _EEAETPAEATGKPQR_ 0 0 1 Q8N9T8;A0A024R7C4;B4DUT2 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.6048 3 538.597036 1612.76928 80921.01 0.47081 0.00025358 -0.029589 -1.5937E-05 0.44122 0.00023764 538.597034082769 544.604432085349 17.717 0.30867 17.717 17.579 17.888 0 64 11 8 0 0 0 5.2493E-05 2 4596 81.632 77.907 1 0.73319 0.82418 0 13209000 8441500 4767500 7147 1916 2709 2779 11163;11164 11163 EEAETPAEATGKPQR 15 1 1 Unmodified _EEAETPAEATGKPQR_ 0 0 1 Q8N9T8;A0A024R7C4;B4DUT2 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.393 2 807.391916 1612.76928 67096.02 0.49717 0.00040141 0.45558 0.00036783 0.95276 0.00076925 807.893703949633 816.403116414616 17.745 0.28584 17.745 17.579 17.865 0 50 10 7 0 0 0 9.547E-07 2 4618 131.43 124.99 1 0.69489 0.77548 0 11396000 6969300 4427000 7148 1916 2709 2779 11165;11166 11165 EEAETPAEATGKPQR 15 1 1 Unmodified _EEAETPAEATGKPQR_ 0 0 1 Q8N9T8;A0A024R7C4;B4DUT2 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.9318 3 538.597036 1612.76928 77691.95 0.14436 7.7749E-05 0.31508 0.0001697 0.45943 0.00024745 538.597577076647 544.604696131526 19.032 0.24731 19.032 18.879 19.127 -1.9073E-06 49 12 6 0 0 0 0.00018951 2 4894 58.079 53.023 1 1.3152 1.0818 0 5103200 2629900 2473300 7149 1916 2709 2779 11167;11168 11168 EEAETPAEATGKPQR 15 1 1 Unmodified _EEAETPAEATGKPQR_ 0 0 1 Q8N9T8;A0A024R7C4;B4DUT2 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.6049 3 538.597036 1612.76928 78782.73 0.082154 4.4248E-05 0.74671 0.00040218 0.82887 0.00044643 538.5976437673 544.604877067503 19.012 0.2234 19.012 18.904 19.128 0 82 14 7 0 0 0 0.0055589 1 4369 34.302 34.302 1 1.3053 1.1068 0 3415600 1324200 2091400 7150 1916 2709 2779 11169 11169 EEAGAPGGGAGMAAGFPYALR 21 0 1 Oxidation (M) _EEAGAPGGGAGM(ox)AAGFPYALR_ EEAGAPGGGAGM(1)AAGFPYALR EEAGAPGGGAGM(65.29)AAGFPYALR 0 1 0 P17676 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 983.4974 2 983.459807 1964.90506 63806.19 0.36973 0.00036362 0.37853 0.00037227 0.74826 0.00073588 983.961321781064 988.965701284005 88.893 0.39565 88.893 88.61 89.006 0 97 28 5 0 0 0 6.1059E-08 3 53557 65.295 62.042 1 1.2151 1.2151 0 16458000 7826800 8631400 7151 1493 2710 2780 11170;11171;11172 11172 1248 EEAGGEAAAAAAAER 15 0 1 Unmodified _EEAGGEAAAAAAAER_ 0 0 0 A0A0S2Q0B1;O14497 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A AT-rich interactive domain-containing protein 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.325 2 687.318219 1372.62189 NaN NaN NaN -0.17915 -0.00012313 NaN NaN NaN NaN 34.596 0.40803 34.596 34.351 34.759 0 0 0 0 0.039485 1 14796 38.799 34.5 1 NaN NaN 0 461360 0 461360 7152 544 2711 2781 11173 11173 EEALEEADELDR 12 0 1 Unmodified _EEALEEADELDR_ 0 0 0 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1;B3KQ09 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.8187 2 709.817718 1417.62088 73620.04 0.62612 0.00044443 -0.072908 -5.1751E-05 0.55321 0.00039268 709.817361842949 714.822093550167 62.454 0.50691 62.454 62.182 62.689 3.8147E-06 158 46 5 0 0 0 3.4869E-08 2 35840 117.52 117.52 1 0.86263 0.89338 0 23063000 12384000 10679000 7153 80 2712 2782 11174;11175 11174 EEALEEADELDR 12 0 1 Unmodified _EEALEEADELDR_ 0 0 0 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1;B3KQ09 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.8223 2 709.817718 1417.62088 73358.95 0.67077 0.00047612 0.012301 8.7313E-06 0.68307 0.00048485 709.817317838623 714.822209749377 61.305 0.69945 61.305 61.08 61.78 0 175 65 4 0 0 0 6.809E-09 3 35850 123.79 119.18 1 0.82413 0.81557 0 15388000 9266000 6121900 7154 80 2712 2782 11176;11177;11178 11177 EEAPASPLRPLYPQISPLK 19 1 1 Unmodified _EEAPASPLRPLYPQISPLK_ 0 0 1 B4DY33;A4D1Z4;P85037;U3KQ26 B4DY33 B4DY33 KIAA0415;FOXK1 Forkhead box protein K1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.7321 3 702.72464 2105.15209 74146.63 1.0211 0.00071755 -0.42832 -0.00030099 0.59278 0.00041656 703.058414737391 708.73199480261 102.32 0.50674 102.32 102.04 102.55 7.6294E-06 90 37 5 0 0 0 0.011768 1 64501 23.172 23.172 1 1.5833 1.7528 0 7832000 4695200 3136800 7155 667 2713 2783 11179 11179 EEAQALEDLTGFK 13 1 0 Unmodified _EEAQALEDLTGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.8647 2 725.856646 1449.69874 70888.63 0.89972 0.00065306 0.67081 0.00048691 1.5705 0.00114 725.856768111628 729.863832770349 98.77 1.4985 98.77 98.072 99.57 0 818 122 12 0 0 0 3.0932E-19 2 60164 147.91 129.85 1 1.789 2.0987 0 300650000 109970000 190680000 7156 1569 2714 2784 11180;11181 11180 EEAQALEDLTGFK 13 1 0 Unmodified _EEAQALEDLTGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.8651 2 725.856646 1449.69874 70638.41 0.72416 0.00052563 0.55903 0.00040577 1.2832 0.00093141 725.856840393026 729.863909448123 98.051 1.4532 98.051 97.337 98.791 7.6294E-06 871 120 12 0 0 0 1.2446E-18 2 61096 139.86 122.83 1 1.7338 2.0418 0 491270000 170770000 320500000 7157 1569 2714 2784 11182;11183 11182 EEAQALEDLTGFK 13 1 0 Unmodified _EEAQALEDLTGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.8665 2 725.856646 1449.69874 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.826 1 98.826 98.326 99.326 0 0 0 0 0.00043353 1 61877 86.014 58.15 1 7158 1569 2714 2784 11184 11184 EEAQALEDLTGFK 13 1 0 Unmodified _EEAQALEDLTGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.8646 2 725.856646 1449.69874 70837.98 0.96098 0.00069753 0.0008939 6.4884E-07 0.96187 0.00069818 725.856781433221 729.863749236648 111.66 1.4449 111.66 111.21 112.66 0 464 81 10 0 0 0 8.5191E-19 2 64561 143.24 136.58 1 3.5264 3.0676 0 146110000 33289000 112820000 7159 1569 2714 2784 11185;11186 11185 EEAQALEDLTGFK 13 1 0 Unmodified _EEAQALEDLTGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.8574 2 725.856646 1449.69874 71145.42 0.67347 0.00048884 0.087201 6.3296E-05 0.76067 0.00055214 725.856681587599 729.863787188955 111.64 2.0249 111.64 111.24 113.26 0 507 107 9 0 0 0 7.998E-09 4 63642 117.14 117.14 1 3.3903 2.9004 0 115530000 25503000 90030000 7160 1569 2714 2784 11187;11188;11189;11190 11189 EEAQSLEDLAGFK 13 1 0 Unmodified _EEAQSLEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.8486 2 718.848821 1435.68309 71931.07 0.92677 0.00066621 0.12388 8.9049E-05 1.0506 0.00075525 718.848917055458 722.855985775407 93.863 1.4951 93.863 93.365 94.86 0 914 135 10 0 0 0 4.3444E-09 4 57307 146.11 146.11 1 1.7954 2.1496 0 911080000 322130000 588950000 7161 1569 2715 2785 11191;11192;11193;11194 11194 EEAQSLEDLAGFK 13 1 0 Unmodified _EEAQSLEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.86 2 718.848821 1435.68309 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.075 1 95.075 94.575 95.575 0 0 0 0 0.0016547 1 57783 70.977 60.148 1 7162 1569 2715 2785 11195 11195 EEAQSLEDLAGFK 13 1 0 Unmodified _EEAQSLEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.8559 2 718.848821 1435.68309 71594.33 0.81439 0.00058542 -0.016593 -1.1928E-05 0.79779 0.00057349 718.848828519333 722.855875066149 93.186 1.5486 93.186 92.624 94.172 -7.6294E-06 949 133 10 0 0 0 1.2904E-18 4 57552 166.97 160.31 1 1.8323 2.161 0 761980000 281790000 480180000 7163 1569 2715 2785 11196;11197;11198;11199 11197 EEAQSLEDLAGFK 13 1 0 Unmodified _EEAQSLEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.8567 2 718.848821 1435.68309 70910.96 0.82445 0.00059266 -0.1299 -9.3379E-05 0.69455 0.00049928 718.849000931486 722.855849482222 107.3 2.3456 107.3 106.85 109.2 0 639 128 11 0 0 0 0.00011224 2 61645 93.096 93.096 1 3.3943 3.0043 0 310680000 70744000 239930000 7164 1569 2715 2785 11200;11201 11201 EEAQSLEDLAGFK 13 1 0 Unmodified _EEAQSLEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.8557 2 718.848821 1435.68309 70851.08 0.71926 0.00051704 -0.03629 -2.6087E-05 0.68297 0.00049095 718.849042053683 722.855892943826 107.26 2.6723 107.26 106.69 109.36 0 811 146 11 0 0 0 1.1808E-08 3 60811 137.98 129.76 1 3.4072 2.9599 0 307960000 70174000 237790000 7165 1569 2715 2785 11202;11203;11204 11204 EEASGSSVTAEEAKK 15 2 0 Unmodified _EEASGSSVTAEEAKK_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.8647 2 761.865199 1521.71585 68724.31 0.60658 0.00046213 -0.21011 -0.00016008 0.39647 0.00030205 761.864673489711 769.87933400108 16.03 0.27606 16.03 15.926 16.202 0 57 15 6 0 0 0 0.00023107 1 3481 80.17 73.786 1 0.36313 0.40218 0 4261900 2752700 1509200 7166 1476 2716 2786 11205 11205 EEAWVIGSVVAR 12 0 1 Unmodified _EEAWVIGSVVAR_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93;A0A140TA71 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.3587 2 658.353877 1314.6932 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.06 1 100.06 99.565 100.56 0 0 0 0 0.0040376 1 61327 65.719 46.366 1 7167 1507 2717 2787 11206 11206 EEAYNSLMK 9 1 0 Oxidation (M) _EEAYNSLM(ox)K_ EEAYNSLM(1)K EEAYNSLM(87.18)K 0 1 0 E5KNY5;P42704;H7C3W8 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.7585 2 550.750064 1099.48558 NaN NaN NaN 0.54609 0.00030076 NaN NaN NaN NaN 26.072 0.3581 26.072 25.923 26.282 -1.9073E-06 0 0 0 0.00038917 1 11582 87.181 77.787 1 NaN NaN 0 6853900 0 6853900 7168 1207 2718 2788 11207 11207 920 EEAYNSLMK 9 1 0 Oxidation (M) _EEAYNSLM(ox)K_ EEAYNSLM(1)K EEAYNSLM(106.36)K 0 1 0 E5KNY5;P42704;H7C3W8 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.7593 2 550.750064 1099.48558 NaN NaN NaN 0.74583 0.00041077 NaN NaN NaN NaN 25.763 0.26572 25.763 25.628 25.893 0 0 0 0 1.0403E-05 1 11330 106.36 95.483 1 NaN NaN 0 6445300 0 6445300 7169 1207 2718 2788 11208 11208 920 EEDESANSLRPGALFFSR 18 0 2 Unmodified _EEDESANSLRPGALFFSR_ 0 0 1 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;P18887;B2RCY5;B4DEB2;M0QZ96;M0R0D2;M0R1U8;M0QYS5 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.996 3 675.660587 2023.95993 76771.63 0.65454 0.00044225 0.98512 0.00066561 1.6397 0.0011079 675.995734792741 682.333894304095 106.66 0.51334 106.66 106.47 106.98 0 67 31 4 0 0 0 0.031438 1 60205 20.368 20.368 1 0.54287 0.4869 0 2368000 987680 1380300 7170 58 2719 2789 11209 11209 EEDGSLSLDGADSTGVVAK 19 1 0 Unmodified _EEDGSLSLDGADSTGVVAK_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.9386 2 925.436717 1848.85888 63704.15 0.81672 0.00075583 -0.50754 -0.0004697 0.30918 0.00028613 925.435889232063 929.443514430682 75.35 0.55672 75.35 75.152 75.709 0 219 46 7 0 0 0 2.6671E-05 2 44212 58.098 51.4 1 1.6215 1.7099 0 30848000 13612000 17236000 7171 862 2720 2790 11210;11211 11211 EEDGSLSLDGADSTGVVAK 19 1 0 Unmodified _EEDGSLSLDGADSTGVVAK_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.4467 2 925.436717 1848.85888 62975.27 0.64746 0.00059918 -0.42822 -0.00039629 0.21923 0.00020289 925.435963072402 929.443666991648 74.553 0.52995 74.553 74.269 74.799 0 212 46 7 0 0 0 7.3262E-06 1 44685 77.078 73.95 1 1.814 2.0109 0 47309000 18906000 28403000 7172 862 2720 2790 11212 11212 EEDGSLSLDGADSTGVVAK 19 1 0 Unmodified _EEDGSLSLDGADSTGVVAK_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 925.4391 2 925.436717 1848.85888 63297.37 0.43966 0.00040687 -0.55444 -0.0005131 -0.11479 -0.00010623 925.938250183058 929.44318168308 86.315 0.55831 86.315 86.045 86.603 -7.6294E-06 140 30 6 0 0 0 0.017205 1 46449 23.842 23.842 1 1.4309 1.174 0 5139600 2033800 3105800 7173 862 2720 2790 11213 11213 EEDPATGTGDPPR 13 0 1 Unmodified _EEDPATGTGDPPR_ 0 0 0 A0A140VJZ1;P45974;F5H571 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.3034 2 671.299495 1340.58444 NaN NaN NaN -0.12883 -8.6481E-05 NaN NaN NaN NaN 21.983 0.29548 21.983 21.846 22.141 0 0 0 0 0.040494 1 8163 41.283 36.5 1 NaN NaN 0 2962400 0 2962400 7174 613 2721 2791 11214 11214 EEDPATGTGDPPRK 14 1 1 Unmodified _EEDPATGTGDPPRK_ 0 0 1 A0A140VJZ1;P45974;F5H571 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.5746 3 490.567077 1468.6794 85625.98 0.2548 0.00012499 -1.0154 -0.00049811 -0.76058 -0.00037312 490.566312267445 496.574267970062 15.949 0.29472 15.949 15.804 16.099 0 68 16 6 0 0 0 0.017815 1 3477 18.596 18.112 1 2.4643 2.8143 0 3248000 1074700 2173300 7175 613 2722 2792 11215 11215 EEDSSVIHYDNEAIAR 16 0 1 Unmodified _EEDSSVIHYDNEAIAR_ 0 0 0 Q12873;B4DLC6 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.6182 3 616.618388 1846.83334 78801.38 0.55097 0.00033974 0.05035 3.1047E-05 0.60132 0.00037079 616.618113539436 620.289138940337 54.666 0.41708 54.666 54.477 54.894 0 117 35 5 0 0 0 4.6743E-05 1 31232 64.507 64.507 1 0.61416 0.60535 0 14681000 7423100 7258200 7176 1701 2723 2793 11216 11216 EEDTSNTTFGPADLK 15 1 0 Unmodified _EEDTSNTTFGPADLK_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.3732 2 812.870482 1623.72641 67276.7 0.78409 0.00063736 -0.048097 -3.9096E-05 0.73599 0.00059827 812.87030781054 816.877408971838 67.625 0.54508 67.625 67.363 67.908 0 170 45 5 0 0 0 0.0033147 1 39067 42.425 38.724 1 0.7135 0.70179 0 19959000 9759700 10199000 7177 1224 2724 2794 11217 11217 EEDTSNTTFGPADLK 15 1 0 Unmodified _EEDTSNTTFGPADLK_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.8708 2 812.870482 1623.72641 66895.74 0.64498 0.00052428 -0.053079 -4.3146E-05 0.5919 0.00048114 812.87042517539 816.877481273072 66.625 0.47643 66.625 66.388 66.864 0 153 39 5 0 0 0 2.6006E-05 1 39295 86.911 80.221 1 0.70292 0.71664 0 25975000 16412000 9562800 7178 1224 2724 2794 11218 11218 EEDTSNTTFGPADLK 15 1 0 Unmodified _EEDTSNTTFGPADLK_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.8768 2 812.870482 1623.72641 68612.41 0.46776 0.00038023 -1.3379 -0.0010875 -0.87009 -0.00070727 813.371126288643 816.877660880864 77.229 0.7177 77.229 76.759 77.477 0 154 47 7 0 0 0 0.0083147 1 41293 35.737 35.334 1 1.9179 1.5951 0 2266900 826610 1440300 7179 1224 2724 2794 11219 11219 EEEAGGFIANLEPVSLADR 19 0 1 Unmodified _EEEAGGFIANLEPVSLADR_ 0 0 0 Q13868;A3KFL5;A3KFL2;B3KQW2;A2VCR1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1014.0024 2 1008.99728 2015.98 61834.13 0.6113 0.0006168 -0.84276 -0.00085034 -0.23146 -0.00023354 1008.99705255991 1014.50292412368 116.93 0.44197 116.93 116.74 117.18 0 153 31 7 0 0 0 0.00063674 2 74641 37.156 37.156 1 0.98535 1.0229 0 22499000 11371000 11127000 7180 1722 2725 2795 11220;11221 11221 EEEAGGFIANLEPVSLADR 19 0 1 Unmodified _EEEAGGFIANLEPVSLADR_ 0 0 0 Q13868;A3KFL5;A3KFL2;B3KQW2;A2VCR1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1014.0012 2 1008.99728 2015.98 61694.66 0.47102 0.00047525 -0.22613 -0.00022816 0.24489 0.00024709 1008.99729750164 1014.00157897292 116.49 0.41969 116.49 116.25 116.67 0 132 26 8 0 0 0 1.7747E-05 1 76118 64.104 55.999 1 1.1531 1.2613 0 34388000 16526000 17862000 7181 1722 2725 2795 11222 11222 EEEAGGFIANLEPVSLADR 19 0 1 Unmodified _EEEAGGFIANLEPVSLADR_ 0 0 0 Q13868;A3KFL5;A3KFL2;B3KQW2;A2VCR1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1014.0018 2 1008.99728 2015.98 60958.95 0.77348 0.00078044 -0.069417 -7.0042E-05 0.70407 0.0007104 1008.99784108558 1014.50395698836 128.65 0.42294 128.65 128.42 128.84 0 100 18 8 0 0 0 0.00017394 1 77668 46.797 45.99 1 1.0175 0.8572 0 4646200 2357600 2288500 7182 1722 2725 2795 11223 11223 EEEEDTAEKPGKEEDVVTPK 20 3 0 Unmodified _EEEEDTAEKPGKEEDVVTPK_ 0 0 2 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.7026 3 753.688537 2258.04378 70781.1 1.081 0.00081471 -0.2579 -0.00019437 0.82306 0.00062033 754.022493124104 761.701974537342 25.455 0.19027 25.455 25.353 25.543 0 22 7 5 0 0 0 0.006945 1 11112 25.158 25.158 1 1.0718 1.2528 0 9834700 3977200 5857500 7183 1738 2726 2796 11224 11224 EEEEEAGESVEDIFSEVVGR 20 0 1 Unmodified _EEEEEAGESVEDIFSEVVGR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1119.9991 2 1119.99787 2237.98118 59920.06 0.50784 0.00056878 0.029895 3.3482E-05 0.53773 0.00060226 1120.49941935605 1125.50313763209 126.63 0.46023 126.63 126.41 126.87 0 204 33 8 0 0 0 6.244E-08 3 82333 86.944 82.553 1 0.91165 0.92587 0 15029000 7374900 7654100 7184 1933 2727 2797 11225;11226;11227 11227 EEEEEAGESVEDIFSEVVGR 20 0 1 Unmodified _EEEEEAGESVEDIFSEVVGR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1120.5004 2 1119.99787 2237.98118 59467.19 0.43892 0.00049159 -0.055991 -6.271E-05 0.38293 0.00042888 1120.49944361306 1125.50311563109 126.32 0.52606 126.32 126.06 126.59 0 197 32 8 0 0 0 1.4038E-23 2 84143 133.16 130.92 1 0.92706 0.9218 0 16273000 9076200 7196900 7185 1933 2727 2797 11228;11229 11228 EEEEEEEEDQEGDRETTIR 19 0 2 Unmodified _EEEEEEEEDQEGDRETTIR_ 0 0 1 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.6584 3 784.657965 2350.95207 67868.44 0.60622 0.00047568 0.2009 0.00015764 0.80712 0.00063332 784.992306099666 791.330392982957 25.13 0.43308 25.13 24.978 25.411 0 131 20 11 0 0 0 2.8992E-64 2 10712 178.12 174.93 1 0.96214 1.0473 0 70604000 37680000 32924000 7186 1756 2728 2798 11230;11231 11230 EEEEEEEEDQEGDRETTIR 19 0 2 Unmodified _EEEEEEEEDQEGDRETTIR_ 0 0 1 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1176.9894 2 1176.48331 2350.95207 56484.95 -0.079447 -9.3468E-05 0.85324 0.0010038 0.77379 0.00091036 1176.98607124556 1186.99378247972 25.117 0.30175 25.117 25.011 25.312 0 41 13 7 0 0 0 0.032493 1 10765 42.209 37.131 1 1.2882 1.4193 0 11734000 5340800 6392700 7187 1756 2728 2798 11232 11232 EEEEEEEEDQEGDRETTIR 19 0 2 Unmodified _EEEEEEEEDQEGDRETTIR_ 0 0 1 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.6586 3 784.657965 2350.95207 68251.82 0.48891 0.00038362 -0.069235 -5.4326E-05 0.41967 0.0003293 784.99225164509 791.664333388771 24.947 0.41525 24.947 24.738 25.153 0 101 17 12 0 0 0 2.9087E-51 2 10575 167.05 167.05 1 0.90814 1.0584 0 96693000 52537000 44155000 7188 1756 2728 2798 11233;11234 11233 EEEEEEEEDQEGDRETTIR 19 0 2 Unmodified _EEEEEEEEDQEGDRETTIR_ 0 0 1 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1176.4823 2 1176.48331 2350.95207 56765.75 -0.22624 -0.00026617 0.40857 0.00048068 0.18233 0.00021451 1176.98544453124 1186.99322232951 24.928 0.22643 24.928 24.857 25.084 0 44 8 9 0 0 0 9.6914E-05 2 10606 31.526 26.447 1 0.85801 0.94719 0 22082000 11584000 10498000 7189 1756 2728 2798 11235;11236 11235 EEEEEEEEDQEGDRETTIR 19 0 2 Unmodified _EEEEEEEEDQEGDRETTIR_ 0 0 1 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 785.3274 3 784.657965 2350.95207 68451.91 0.43337 0.00034005 -0.05872 -4.6075E-05 0.37465 0.00029397 784.657898300243 791.330153888945 29.723 0.41967 29.723 29.509 29.929 0 228 31 10 0 0 0 5.1173E-05 2 12131 48.112 48.112 1 1.2558 1.0669 0 8002200 3621500 4380700 7190 1756 2728 2798 11237;11238 11238 EEEEEEEEDQEGDRETTIR 19 0 2 Unmodified _EEEEEEEEDQEGDRETTIR_ 0 0 1 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.9917 3 784.657965 2350.95207 68878.42 0.28836 0.00022626 0.12401 9.7306E-05 0.41237 0.00032357 784.99248902456 791.664579872048 30.168 0.44803 30.168 29.955 30.403 -1.9073E-06 176 28 10 0 0 0 5.3556E-06 3 11906 71.558 71.552 1 1.2558 1.1419 0 6566900 2782800 3784100 7191 1756 2728 2798 11239;11240;11241 11240 EEEEEEEEEQLNQTLAEMK 19 1 0 Oxidation (M) _EEEEEEEEEQLNQTLAEM(ox)K_ EEEEEEEEEQLNQTLAEM(1)K EEEEEEEEEQLNQTLAEM(130.1)K 0 1 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1181.0046 2 1176.99721 2351.97986 57758.13 -0.21107 -0.00024843 0.032514 3.8269E-05 -0.17856 -0.00021016 1177.49900303375 1181.5056761992 74.556 0.3941 74.556 74.344 74.738 0 64 32 4 0 0 0 7.3946E-23 1 43676 130.1 130.1 1 1.6779 1.7428 0 12491000 4490100 8001200 7192 1898 2729 2799 11242 11242 1740 EEEEEEEEEQLNQTLAEMK 19 1 0 Oxidation (M) _EEEEEEEEEQLNQTLAEM(ox)K_ EEEEEEEEEQLNQTLAEM(1)K EEEEEEEEEQLNQTLAEM(61.17)K 0 1 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1176.996 2 1176.99721 2351.97986 NaN NaN NaN 0.23431 0.00027578 NaN NaN NaN NaN 74.435 0.11276 74.435 74.359 74.472 0 0 0 0 6.5989E-05 1 43674 61.167 56.089 1 NaN NaN 0 2656600 2656600 0 7193 1898 2729 2799 11243 11243 1740 EEEEEEEEEQLNQTLAEMK 19 1 0 Oxidation (M) _EEEEEEEEEQLNQTLAEM(ox)K_ EEEEEEEEEQLNQTLAEM(1)K EEEEEEEEEQLNQTLAEM(119.25)K 0 1 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1176.9993 2 1176.99721 2351.97986 56995.05 -0.23417 -0.00027562 0.25621 0.00030156 0.022041 2.5942E-05 1177.49942179681 1181.50609105516 73.692 0.43335 73.692 73.507 73.941 0 137 35 5 0 0 0 3.8198E-17 2 44209 119.25 119.25 1 1.2464 1.2524 0 13638000 5556400 8081300 7194 1898 2729 2799 11244;11245 11245 1740 EEEEEPEGKPSDAESSESSDDEK 23 2 0 Unmodified _EEEEEPEGKPSDAESSESSDDEK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.3462 3 847.003578 2537.9889 NaN NaN NaN -0.30489 -0.00025824 NaN NaN NaN NaN 17.4 0.25171 17.4 17.307 17.558 0 0 0 0 0.001595 1 4592 40.81 20.942 1 NaN NaN 0 1439300 0 1439300 7195 2000 2730 2800 11246 11246 EEEEEPEGKPSDAESSESSDDEK 23 2 0 Unmodified _EEEEEPEGKPSDAESSESSDDEK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.6815 3 847.003578 2537.9889 NaN NaN NaN 0.052396 4.4379E-05 NaN NaN NaN NaN 17.372 0.27287 17.372 17.284 17.557 0 0 0 0 8.7365E-07 1 4338 59.469 44.694 1 NaN NaN 0 2373800 0 2373800 7196 2000 2730 2800 11247 11247 EEEEEVFESSVPQR 14 0 1 Unmodified _EEEEEVFESSVPQR_ 0 0 0 O60566;H0YMK5 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.3864 2 847.381214 1692.74787 66597.09 0.59083 0.00050066 -0.0020547 -1.7411E-06 0.58877 0.00049892 847.380987177305 852.38557750991 66.099 0.55416 66.099 65.842 66.396 0 198 50 6 0 0 0 3.7907E-14 2 38037 125.74 125.74 1 0.90074 0.92133 0 14558000 7534000 7023700 7197 1396 2731 2801 11248;11249 11249 EEEEEVFESSVPQR 14 0 1 Unmodified _EEEEEVFESSVPQR_ 0 0 0 O60566;H0YMK5 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.3865 2 847.381214 1692.74787 67027.52 0.50097 0.00042451 0.1091 9.2446E-05 0.61006 0.00051695 847.381065833096 852.385983074295 65.132 0.59016 65.132 64.886 65.476 0 152 47 5 0 0 0 1.9001E-14 1 38294 131.83 131.83 1 1.0279 1.0212 0 11889000 5653300 6235200 7198 1396 2731 2801 11250 11250 EEEEEVFESSVPQR 14 0 1 Unmodified _EEEEEVFESSVPQR_ 0 0 0 O60566;H0YMK5 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 852.8878 2 847.381214 1692.74787 66510.15 0.63439 0.00053757 0.15317 0.0001298 0.78757 0.00066737 847.381060393194 852.385187937134 76.064 0.51291 76.064 75.781 76.294 0 115 34 5 0 0 0 0.0064601 3 40422 53.211 53.211 1 1.2923 1.1219 0 2362700 869630 1493100 7199 1396 2731 2801 11251;11252;11253 11251 EEEELSSQMSSFNEAMTQIR 20 0 1 2 Oxidation (M) _EEEELSSQM(ox)SSFNEAM(ox)TQIR_ EEEELSSQM(1)SSFNEAM(1)TQIR EEEELSSQM(48.7)SSFNEAM(48.7)TQIR 0 2 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;H0Y5Z9 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1194.5146 2 1189.50976 2377.00497 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.385 1 68.385 67.885 68.885 0 0 0 0 0.0034978 1 40623 48.704 41.502 1 7200 626 2732 2802 11254 11254 481;482 EEEGTGVVHQAPYFGAEDYR 20 0 1 Unmodified _EEEGTGVVHQAPYFGAEDYR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.3434 3 752.006423 2252.99744 NaN NaN NaN 0.60329 0.00045368 NaN NaN NaN NaN 72.282 0.60565 72.282 72.006 72.611 0 0 0 0 4.4296E-11 1 42293 89.859 89.859 1 NaN NaN 0 16662000 0 16662000 7201 1561 2733 2803 11255 11255 EEEGTGVVHQAPYFGAEDYR 20 0 1 Unmodified _EEEGTGVVHQAPYFGAEDYR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.3436 3 752.006423 2252.99744 69982.69 0.50851 0.00038241 0.66711 0.00050167 1.1756 0.00088407 752.341028439937 755.343557612897 71.012 0.63788 71.012 70.714 71.352 0 241 47 8 0 0 0 0.0019107 1 42536 26.78 26.78 1 2.4337 2.6597 0 36566000 12089000 24476000 7202 1561 2733 2803 11256 11256 EEEIAALVIDNGSGMCK 17 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)EEEIAALVIDNGSGM(ox)CK_ EEEIAALVIDNGSGM(1)CK EEEIAALVIDNGSGM(168.98)CK 1 1 0 P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 P63261 P63261 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 951.4389 2 947.432066 1892.84958 61450.73 0.9043 0.00085676 -0.89242 -0.00084551 0.011878 1.1253E-05 947.93355130083 951.438335334975 125.98 1.0011 125.98 125.62 126.62 7.6294E-06 361 57 10 0 0 0 2.4559E-45 1 83922 168.98 168.98 1 2.7125 3.0309 0 92882000 25748000 67134000 7203 1656 2734 2804 11257 11257 1435 EEEIITLQQFLR 12 0 1 Unmodified _EEEIITLQQFLR_ 0 0 0 B4E3J2;F5H586;Q5H9S4;H0Y6W5;D3DRJ1;B4DR27;B1APH0;Q6ZN30;Q06HB9;A0A1B0GX98;Q06HC2;Q06HC3;Q06HC1;Q06HC4 B4E3J2 B4E3J2 BNC2;DKFZp686A01127;hCG_27250 Zinc finger protein basonuclin-2 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.916 2 759.911756 1517.80896 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.27 1 134.27 133.77 134.77 0 0 0 0 0.00092877 1 81922 74.162 55.382 1 7204 819 2735 2805 11258 11258 EEEIITLQQFLR 12 0 1 Unmodified _EEEIITLQQFLR_ 0 0 0 B4E3J2;F5H586;Q5H9S4;H0Y6W5;D3DRJ1;B4DR27;B1APH0;Q6ZN30;Q06HB9;A0A1B0GX98;Q06HC2;Q06HC3;Q06HC1;Q06HC4 B4E3J2 B4E3J2 BNC2;DKFZp686A01127;hCG_27250 Zinc finger protein basonuclin-2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.4193 2 759.911756 1517.80896 NaN NaN NaN 0.32699 0.00024848 NaN NaN NaN NaN 134.15 0.33235 134.15 133.95 134.28 0 0 0 0 0.00048051 1 80893 88.495 61.397 1 NaN NaN 0 2163700 0 2163700 7205 819 2735 2805 11259 11259 EEEISELK 8 1 0 Unmodified _EEEISELK_ 0 0 0 F8VWR9;B7Z4H8;B1APN9;G3V200;Q4LE62;O75335;O75334 F8VWR9 F8VWR9 PPFIA2;PPFIA4;PPFIA2 variant protein Liprin-alpha-4;Liprin-alpha-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7455 2 488.745305 975.476056 86765.2 0.23584 0.00011527 0.85805 0.00041937 1.0939 0.00053464 488.745311951279 492.752964781751 40.369 0.62576 40.369 40.061 40.687 0 166 54 5 0 0 0 0.0019305 1 21100 104.45 49.007 1 0.81413 0.87593 0 33083000 21788000 11295000 7206 821 2736 2806 11260 11260 EEEISELK 8 1 0 Unmodified _EEEISELK_ 0 0 0 F8VWR9;B7Z4H8;B1APN9;G3V200;Q4LE62;O75335;O75334 F8VWR9 F8VWR9 PPFIA2;PPFIA4;PPFIA2 variant protein Liprin-alpha-4;Liprin-alpha-2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.7454 2 488.745305 975.476056 NaN NaN NaN 0.17961 8.7781E-05 NaN NaN NaN NaN 39.495 0.7112 39.495 38.984 39.695 -3.8147E-06 0 0 0 0.0068932 1 20897 84.097 38.216 1 NaN NaN 0 14539000 14539000 0 7207 821 2736 2806 11261 11261 EEELEETGNQHNDVEIEEAGEEEEK 25 1 0 Unmodified _EEELEETGNQHNDVEIEEAGEEEEK_ 0 0 0 Q9H307;A8K964;B4DTD4;B4E392 Q9H307 Q9H307 PNN Pinin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 972.4094 3 972.411008 2914.21119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.177 1 55.177 54.677 55.677 -3.8147E-06 0 0 0 0.019371 1 31021 40.177 29.034 1 7208 2028 2737 2807 11262 11262 EEELEETGNQHNDVEIEEAGEEEEK 25 1 0 Unmodified _EEELEETGNQHNDVEIEEAGEEEEK_ 0 0 0 Q9H307;A8K964;B4DTD4;B4E392 Q9H307 Q9H307 PNN Pinin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.0834 3 972.411008 2914.21119 NaN NaN NaN -0.040704 -3.9581E-05 NaN NaN NaN NaN 54.205 0.26968 54.205 54.106 54.375 0 0 0 0 7.9521E-06 1 30942 43.349 33.5 1 NaN NaN 0 12824000 0 12824000 7209 2028 2737 2807 11263 11263 EEELEETGNQHNDVEIEEAGEEEEK 25 1 0 Unmodified _EEELEETGNQHNDVEIEEAGEEEEK_ 0 0 0 Q9H307;A8K964;B4DTD4;B4E392 Q9H307 Q9H307 PNN Pinin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 972.7463 3 972.411008 2914.21119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.11 1 54.11 53.61 54.61 0 0 0 0 0.023212 1 30917 39.188 31.995 1 7210 2028 2737 2807 11264 11264 EEELNAIR 8 0 1 Unmodified _EEELNAIR_ 0 0 0 A0A024R663;Q86UP2;G3V4Y7;H0YJZ8 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.2507 2 487.251089 972.487624 90402.56 0.15223 7.4175E-05 -0.5841 -0.0002846 -0.43187 -0.00021043 487.250861832229 492.255120228136 43.561 0.51376 43.561 43.367 43.881 -3.8147E-06 88 33 5 0 0 0 0.041527 1 20021 46.835 20.612 1 0.33184 0.28872 0 1253100 762820 490290 7211 197 2738 2808 11265 11265 EEEMGEEEEVER 12 0 1 Oxidation (M) _EEEM(ox)GEEEEVER_ EEEM(1)GEEEEVER EEEM(164.97)GEEEEVER 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.7997 2 755.796125 1509.5777 70228.84 0.35832 0.00027081 0.094924 7.1743E-05 0.45324 0.00034256 755.796231769338 760.800424212202 20.604 0.35165 20.604 20.493 20.844 1.9073E-06 88 14 8 0 0 0 1.7779E-29 2 6994 164.97 138.46 1 0.88929 0.93257 0 39334000 20363000 18970000 7212 515 2739 2809 11266;11267 11266 368 EEENVGIDITEPLYMQR 17 0 1 Oxidation (M) _EEENVGIDITEPLYM(ox)QR_ EEENVGIDITEPLYM(1)QR EEENVGIDITEPLYM(46.07)QR 0 1 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RFJ8 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1031.4879 2 1026.48314 2050.95174 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.61 1 102.61 102.11 103.11 7.6294E-06 0 0 0 0.0038667 1 63202 46.069 28.404 1 7213 235 2740 2810 11268 11268 175 EEESQQQAVLEQERR 15 0 2 Unmodified _EEESQQQAVLEQERR_ 0 0 1 A0A0A0MRM8;A0A0D9SGC1;E7EW20;Q9UM54;Q5JVM0 A0A0A0MRM8 A0A0A0MRM8 MYO6 Unconventional myosin-VI MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.9738 3 620.301171 1857.88168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.828 1 25.828 25.328 26.328 0 0 0 0 0.03555 1 11376 35.037 24.552 1 7214 467 2741 2811 11269 11269 EEETEAAIGAPPTATEGPETK 21 1 0 Unmodified _EEETEAAIGAPPTATEGPETK_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1064.5016 2 1064.50005 2126.98554 59890.68 0.41835 0.00044534 -0.18538 -0.00019733 0.23298 0.00024801 1064.4996620213 1068.50693602432 61.669 0.5248 61.669 61.404 61.929 0 201 41 6 0 0 0 6.939E-29 3 35186 132.31 121.05 1 1.6043 1.5726 0 20828000 8466900 12361000 7215 862 2742 2812 11270;11271;11272 11271 EEETEAAIGAPPTATEGPETK 21 1 0 Unmodified _EEETEAAIGAPPTATEGPETK_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.501 2 1064.50005 2126.98554 61331.44 -0.11878 -0.00012644 0.24242 0.00025806 0.12364 0.00013161 1065.00155417258 1068.50759533684 60.776 0.44763 60.776 60.526 60.973 0 117 38 6 0 0 0 7.0273E-09 2 35513 95.264 90.463 1 1.5878 1.6231 0 17351000 6594900 10757000 7216 862 2742 2812 11273;11274 11274 EEETLDTIK 9 1 0 Unmodified _EEETLDTIK_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24;Q9HBZ9;Q7Z4W5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.2765 2 539.269144 1076.52373 84096.76 0.59385 0.00032025 -0.25342 -0.00013666 0.34043 0.00018358 539.268615127119 543.276423946982 40.232 0.37091 40.232 40.028 40.398 0 93 31 5 0 0 0 0.025193 1 21477 47.96 24.888 1 2.268 2.4475 0 21816000 7765800 14050000 7217 593 2743 2813 11275 11275 EEEVTGPVIAPLFPQK 16 1 0 Unmodified _EEEVTGPVIAPLFPQK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.4728 2 877.472177 1752.9298 64851.35 0.73971 0.00064907 -0.033012 -2.8967E-05 0.7067 0.00062011 877.472016366279 881.479059734047 112.64 0.61753 112.64 112.32 112.93 0 263 45 8 0 0 0 2.16E-06 2 71021 97.456 97.456 1 1.0154 1.0802 0 31755000 16673000 15082000 7218 1411 2744 2814 11276;11277 11277 EEEVTGPVIAPLFPQK 16 1 0 Unmodified _EEEVTGPVIAPLFPQK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.4732 2 877.472177 1752.9298 64016.96 0.88916 0.00078022 0.19577 0.00017178 1.0849 0.000952 877.472040407265 881.479222335186 112.02 0.56983 112.02 111.72 112.29 -7.6294E-06 274 42 9 0 0 0 0.0001547 1 72283 74.944 68.285 1 0.97873 1.0222 0 34270000 18135000 16135000 7219 1411 2744 2814 11278 11278 EEEVTGPVIAPLFPQK 16 1 0 Unmodified _EEEVTGPVIAPLFPQK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 877.4728 2 877.472177 1752.9298 65322.65 0.76498 0.00067125 -0.60233 -0.00052853 0.16265 0.00014272 877.472154450429 881.979030695489 123.63 0.61394 123.63 123.41 124.02 -7.6294E-06 92 25 7 0 0 0 0.017109 1 73911 30.139 28.832 1 0.9769 0.75974 0 3664300 1924000 1740300 7220 1411 2744 2814 11279 11279 EEEVTGPVIAPLFPQK 16 1 0 Unmodified _EEEVTGPVIAPLFPQK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 877.4736 2 877.472177 1752.9298 67122.59 0.4882 0.00042838 0.34723 0.00030469 0.83543 0.00073307 877.973809897432 881.479727760387 123.48 0.49937 123.48 123.26 123.76 0 97 20 8 0 0 0 0.0010629 2 72921 46.796 44.007 1 0.96299 0.76173 0 3951200 2217700 1733500 7221 1411 2744 2814 11280;11281 11281 EEEWDPEYTPK 11 1 0 Unmodified _EEEWDPEYTPK_ 0 0 0 Q9NYF8;B0AZU3;H0YF14;Q9Y2W1 Q9NYF8;Q9Y2W1 Q9Y2W1 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.3095 2 711.806622 1421.59869 NaN NaN NaN -0.3441 -0.00024493 NaN NaN NaN NaN 61.549 0.53802 61.549 61.313 61.851 0 0 0 0 0.0080049 1 36113 61.65 43.21 1 NaN NaN 0 4422300 4422300 0 7222 2128;2083 2745 2815 11282 11282 EEFQHAMGGVPAWAETTK 18 1 0 Oxidation (M) _EEFQHAM(ox)GGVPAWAETTK_ EEFQHAM(1)GGVPAWAETTK EEFQHAM(50.39)GGVPAWAETTK 0 1 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.6472 3 668.975518 2003.90473 73881.4 0.49399 0.00033047 0.15977 0.00010688 0.65376 0.00043735 669.309940269243 671.647058295247 62.517 0.56866 62.517 62.278 62.847 0 293 53 7 0 0 0 1.904E-05 1 36674 50.392 50.392 1 1.0104 1.0265 0 30046000 15270000 14776000 7223 876 2746 2816 11283 11283 682 EEFVEDAAALK 11 1 0 Unmodified _EEFVEDAAALK_ 0 0 0 Q9H3U1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.311 2 611.303518 1220.59248 NaN NaN NaN -0.20792 -0.0001271 NaN NaN NaN NaN 72.236 0.48395 72.236 72.06 72.544 0 0 0 0 0.010548 1 42267 58.433 39.162 1 NaN NaN 0 4171000 0 4171000 7224 2029 2747 2817 11284 11284 EEGDEEGEGDEAEDEEQRGPELK 23 1 1 Unmodified _EEGDEEGEGDEAEDEEQRGPELK_ 0 0 1 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 859.6848 3 859.351201 2575.03177 68214.41 0.62158 0.00053416 0.080005 6.8752E-05 0.70159 0.00060291 859.685662410134 865.358526182078 33.955 0.23524 33.955 33.796 34.031 0 66 19 6 0 0 0 4.1153E-08 2 17111 56.882 56.882 1 1.3493 1.5046 0 11212000 5128100 6084000 7225 1870 2748 2818 11285;11286 11286 EEGDLGPVYGFQWR 14 0 1 Unmodified _EEGDLGPVYGFQWR_ 0 0 0 Q53Y97;Q53FB7;A8K9A5;P04818 Q53Y97 Q53Y97 TYMS Thymidylate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.8921 2 826.888812 1651.76307 NaN NaN NaN -0.83111 -0.00068724 NaN NaN NaN NaN 108.49 0.3298 108.49 108.32 108.65 0 0 0 0 0.023838 1 67741 42.718 36.334 1 NaN NaN 0 4722000 0 4722000 7226 782 2749 2819 11287 11287 EEGETADTVGCCSLR 15 0 1 Unmodified _EEGETADTVGCCSLR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.356 2 842.351076 1682.6876 64987.32 0.71921 0.00060583 -0.62464 -0.00052616 0.094579 7.9668E-05 842.35096104396 847.355036706713 40.387 0.86916 40.387 40.147 41.016 0 572 76 11 0 0 0 5.2828E-07 3 20997 101.89 97.59 1 0.97313 1.1519 0 361170000 174960000 186200000 7227 1470 2750 2820 11288;11289;11290 11289 EEGETADTVGCCSLR 15 0 1 Unmodified _EEGETADTVGCCSLR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 842.3544 2 842.351076 1682.6876 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.958 1 40.958 40.458 41.458 0 0 0 0 0.0099012 1 21497 48.044 40.399 1 7228 1470 2750 2820 11291 11291 EEGETADTVGCCSLR 15 0 1 Unmodified _EEGETADTVGCCSLR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.3568 2 842.351076 1682.6876 64702.25 0.95213 0.00080203 -0.57364 -0.00048321 0.37849 0.00031882 842.35100162704 847.355041251355 39.651 0.93864 39.651 39.173 40.112 0 598 80 10 0 0 0 3.8321E-10 3 21308 115.33 112.35 1 0.91255 1.0604 0 366840000 190360000 176470000 7229 1470 2750 2820 11292;11293;11294 11294 EEGETADTVGCCSLR 15 0 1 Unmodified _EEGETADTVGCCSLR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 847.3553 2 842.351076 1682.6876 64054.45 0.41067 0.00034593 -0.49805 -0.00041954 -0.087381 -7.3606E-05 842.351397446533 847.355167373092 47.025 1.6013 47.025 46.599 48.2 3.8147E-06 894 114 12 0 0 0 2.6373E-22 4 22804 147.24 144.27 1 1.441 1.2505 0 202560000 81015000 121540000 7230 1470 2750 2820 11295;11296;11297;11298 11296 EEGETADTVGCCSLR 15 0 1 Unmodified _EEGETADTVGCCSLR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 847.3559 2 842.351076 1682.6876 64234.79 0.24934 0.00021003 -0.37857 -0.00031889 -0.12922 -0.00010885 842.351498469566 847.355284736232 47.533 1.47 47.533 47.075 48.545 3.8147E-06 805 120 13 0 0 0 1.7986E-47 3 22501 181.49 177.19 1 1.536 1.3416 0 200130000 82977000 117150000 7231 1470 2750 2820 11299;11300;11301 11299 EEGIENFDVYAIK 13 1 0 Unmodified _EEGIENFDVYAIK_ 0 0 0 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.8773 2 763.872296 1525.73004 NaN NaN NaN 2.0941 0.0015996 NaN NaN NaN NaN 102.46 0.68989 102.46 102.19 102.88 0 0 0 0 0.018002 1 62943 48.981 31.545 1 NaN NaN 0 8040200 0 8040200 7232 70 2751 2821 11302 11302 EEGIENFDVYAIK 13 1 0 Unmodified _EEGIENFDVYAIK_ 0 0 0 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.8778 2 763.872296 1525.73004 70290.29 0.43956 0.00033577 0.32879 0.00025115 0.76835 0.00058692 763.871731133817 767.880036328584 101.87 0.62551 101.87 101.47 102.09 0 97 47 4 0 0 0 1.5897E-05 1 64088 99.568 91.922 1 2.2526 2.263 0 13657000 5807500 7849800 7233 70 2751 2821 11303 11303 EEGNLEAVLNALDK 14 1 0 Unmodified _EEGNLEAVLNALDK_ 0 0 0 U3KQ54;Q6P1K2;D3DVB3 U3KQ54 U3KQ54 PMF1-BGLAP;PMF1;hCG_1999356 Polyamine-modulated factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.8887 2 757.888478 1513.7624 71125.37 0.63899 0.00048429 -0.57691 -0.00043723 0.062083 4.7052E-05 757.888560956978 761.895632727754 117.47 0.60236 117.47 117.22 117.83 0 204 40 8 0 0 0 3.9792E-06 2 75125 100.93 94.398 1 0.73674 0.76893 0 11794000 6774800 5019400 7234 1852 2752 2822 11304;11305 11304 EEGNLEAVLNALDK 14 1 0 Unmodified _EEGNLEAVLNALDK_ 0 0 0 U3KQ54;Q6P1K2;D3DVB3 U3KQ54 U3KQ54 PMF1-BGLAP;PMF1;hCG_1999356 Polyamine-modulated factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.8882 2 757.888478 1513.7624 70582.02 0.6711 0.00050862 0.018828 1.4269E-05 0.68993 0.00052289 757.888672445842 761.895570209906 116.94 0.50438 116.94 116.7 117.21 0 120 30 5 0 0 0 3.4816E-05 2 76614 100.93 100.93 1 0.80721 0.82306 0 12149000 6058400 6090600 7235 1852 2752 2822 11306;11307 11306 EEGNLEAVLNALDK 14 1 0 Unmodified _EEGNLEAVLNALDK_ 0 0 0 U3KQ54;Q6P1K2;D3DVB3 U3KQ54 U3KQ54 PMF1-BGLAP;PMF1;hCG_1999356 Polyamine-modulated factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 761.8943 2 757.888478 1513.7624 71422.09 0.72492 0.00054941 0.83717 0.00063448 1.5621 0.0011839 757.888757526682 761.896937365295 129.91 0.53162 129.91 129.67 130.2 -1.5259E-05 76 23 5 0 0 0 0.052426 1 78607 29.689 28.437 1 1.3393 1.0973 0 2521900 1089000 1432800 7236 1852 2752 2822 11308 11308 EEGTPLTLYYSHWR 14 0 1 Unmodified _EEGTPLTLYYSHWR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.9538 3 584.617771 1750.83148 80740.41 0.7628 0.00044595 -0.55248 -0.00032299 0.21031 0.00012295 584.617194593275 588.288573537409 92.857 0.77526 92.857 92.541 93.316 0 225 68 6 0 0 0 0.0026518 1 56234 38.399 38.399 1 0.90815 0.94379 0 20895000 8321500 12574000 7237 2139 2753 2823 11309 11309 EEGTPLTLYYSHWR 14 0 1 Unmodified _EEGTPLTLYYSHWR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.4316 2 876.423019 1750.83148 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.572 1 91.572 91.072 92.072 0 0 0 0 0.0065249 1 56695 54.471 45.467 1 7238 2139 2753 2823 11310 11310 EEGTPLTLYYSHWR 14 0 1 Unmodified _EEGTPLTLYYSHWR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8026 3 584.617771 1750.83148 80294.75 0.76999 0.00045015 -0.066572 -3.8919E-05 0.70341 0.00041123 584.951771805724 587.953957783831 91.575 0.59192 91.575 91.305 91.897 0 189 51 5 0 0 0 0.00047063 1 56650 61.167 52.225 1 0.82004 0.8772 0 24970000 11736000 13234000 7239 2139 2753 2823 11311 11311 EEGTPLTLYYSHWR 14 0 1 Unmodified _EEGTPLTLYYSHWR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.6181 3 584.617771 1750.83148 79836.58 0.59743 0.00034927 -0.31802 -0.00018592 0.27942 0.00016335 584.951752541561 587.953903353359 105.34 0.50203 105.34 105.06 105.56 -7.6294E-06 149 33 7 0 0 0 0.0038969 1 60051 36.022 36.022 1 1.0365 0.8769 0 4937500 2655500 2282000 7240 2139 2753 2823 11312 11312 EEGTPLTLYYSHWR 14 0 1 Unmodified _EEGTPLTLYYSHWR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.9521 3 584.617771 1750.83148 78332.75 0.46125 0.00026966 -0.17756 -0.00010381 0.28369 0.00016585 584.951793769774 587.953822209387 105.05 0.45495 105.05 104.76 105.22 0 135 28 6 0 0 0 0.022362 1 58955 23.138 23.138 1 1.0419 0.9215 0 4062600 2188700 1873900 7241 2139 2753 2823 11313 11313 EEIAQLAR 8 0 1 Unmodified _EEIAQLAR_ 0 0 0 B4DR71;A2A3U5;Q99720 B4DR71 B4DR71 hCG_20471;SIGMAR1 Sigma non-opioid intracellular receptor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.2592 2 465.256174 928.497795 88629.15 0.49968 0.00023248 -0.024424 -1.1363E-05 0.47526 0.00022112 465.256367220841 470.259876664769 42.649 0.37526 42.649 42.43 42.806 -3.8147E-06 122 31 6 0 0 0 0.0033502 2 22635 97.068 47.926 1 0.69134 0.7108 0 36455000 23322000 13133000 7242 650 2754 2824 11314;11315 11314 EEIAQLAR 8 0 1 Unmodified _EEIAQLAR_ 0 0 0 B4DR71;A2A3U5;Q99720 B4DR71 B4DR71 hCG_20471;SIGMAR1 Sigma non-opioid intracellular receptor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.2609 2 465.256174 928.497795 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.336 1 41.336 40.836 41.836 0 0 0 0 0.050274 1 22199 54.571 8.8528 1 7243 650 2754 2824 11316 11316 EEIDPDEEESAK 12 1 0 Unmodified _EEIDPDEEESAK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.7971 2 695.796451 1389.57835 73322.48 0.56269 0.00039152 0.095467 6.6426E-05 0.65816 0.00045794 695.796420304882 699.803556347669 27.903 0.41105 27.903 27.695 28.106 1.9073E-06 156 27 8 0 0 0 3.2572E-08 2 12941 118.03 118.03 1 0.95639 1.0813 0 84664000 42647000 42017000 7244 1742 2755 2825 11317;11318 11318 EEIDPDEEESAK 12 1 0 Unmodified _EEIDPDEEESAK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.8032 2 695.796451 1389.57835 73274.38 0.41999 0.00029223 0.06241 4.3425E-05 0.4824 0.00033565 695.796377554396 699.803401425106 27.391 0.36792 27.391 27.223 27.591 0 111 19 8 0 0 0 8.0644E-18 2 12643 142 142 1 0.95933 1.0727 0 107800000 56986000 50814000 7245 1742 2755 2825 11319;11320 11320 EEIDPDEEESAK 12 1 0 Unmodified _EEIDPDEEESAK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.8041 2 695.796451 1389.57835 71753.61 0.30115 0.00020954 0.43714 0.00030416 0.73829 0.0005137 696.299141087366 699.803612784508 32.004 0.41026 32.004 31.784 32.194 0 93 22 6 0 0 0 0.054857 1 13583 31.843 31.843 1 1.2563 1.0006 0 6740700 2200400 4540200 7246 1742 2755 2825 11321 11321 EEIDPDEEESAK 12 1 0 Unmodified _EEIDPDEEESAK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 695.7972 2 695.796451 1389.57835 NaN NaN NaN 1.5109 0.0010513 NaN NaN NaN NaN 32.248 0.57658 32.248 31.908 32.485 0 0 0 0 0.0068733 1 13354 59.542 52.654 1 NaN NaN 0 2947000 2947000 0 7247 1742 2755 2825 11322 11322 EEIDPDEEESAKK 13 2 0 Unmodified _EEIDPDEEESAKK_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.775 3 506.898381 1517.67331 85342.23 0.18858 9.5593E-05 -0.39325 -0.00019934 -0.20466 -0.00010374 506.898607762811 512.240962231781 20.776 0.22695 20.776 20.644 20.871 1.9073E-06 27 8 5 0 0 0 0.031247 1 7181 20.733 20.733 1 0.69566 0.77362 0 5715300 3109600 2605700 7248 1742 2756 2826 11323 11323 EEIGNVQLEK 10 1 0 Unmodified _EEIGNVQLEK_ 0 0 0 A0A024R663;Q86UP2;G3V4Y7;H0YJZ8;G3V5G2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.8037 2 579.803685 1157.59282 79273.32 0.36481 0.00021152 0.17185 9.9637E-05 0.53666 0.00031116 579.803657690765 583.810853458763 59.733 0.59418 59.733 59.477 60.071 -3.8147E-06 149 41 5 0 0 0 0.012291 1 30494 50.834 36.072 1 0.52572 0.44305 0 1933600 1162300 771300 7249 197 2757 2827 11324 11324 EEIGNVQLEK 10 1 0 Unmodified _EEIGNVQLEK_ 0 0 0 A0A024R663;Q86UP2;G3V4Y7;H0YJZ8;G3V5G2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.8029 2 579.803685 1157.59282 78339.3 0.36505 0.00021166 -0.50678 -0.00029383 -0.14173 -8.2174E-05 579.803539159815 583.810309664617 60.26 0.47473 60.26 59.998 60.473 0 81 35 4 0 0 0 0.013114 1 30166 49.715 42.655 1 0.48678 0.41833 0 1397600 828850 568710 7250 197 2757 2827 11325 11325 EEIIEAFVQELR 12 0 1 Unmodified _EEIIEAFVQELR_ 0 0 0 A0A0S2Z4I7;A0A0S2Z4I9;A0A0S2Z4N8;A0A024R0V4;P50552 A0A0S2Z4I7 A0A0S2Z4I7 VASP Vasodilator-stimulated phosphoprotein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.3954 2 738.390656 1474.76676 NaN NaN NaN 0.44969 0.00033205 NaN NaN NaN NaN 126.43 0.37913 126.43 126.22 126.6 0 0 0 0 0.00099151 1 84316 83 33.582 1 NaN NaN 0 1863900 0 1863900 7251 59 2758 2828 11326 11326 EEILAQAK 8 1 0 Unmodified _EEILAQAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2604 2 451.2531 900.491647 NaN NaN NaN -0.7212 -0.00032544 NaN NaN NaN NaN 31.136 1.1768 31.136 31.016 32.193 0 0 0 0 0.0077322 1 15343 81.784 47.681 1 NaN NaN 0 29056000 0 29056000 7252 81 2759 2829 11327 11327 EEILAQAK 8 1 0 Unmodified _EEILAQAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.2538 2 451.2531 900.491647 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.118 1 31.118 30.618 31.618 0 0 0 0 0.005245 1 15322 85.357 36.596 1 7253 81 2759 2829 11328 11328 EEILAQAK 8 1 0 Unmodified _EEILAQAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.2534 2 451.2531 900.491647 91577.77 0.042766 1.9298E-05 -0.22448 -0.0001013 -0.18171 -8.1998E-05 451.253219633811 455.259975074527 30.578 1.0762 30.578 30.408 31.484 1.9073E-06 276 93 6 0 0 0 0.0015211 2 15067 108.24 59.892 1 1.9217 2.1428 0 52055000 17998000 34056000 7254 81 2759 2829 11329;11330 11330 EEINDIK 7 1 0 Unmodified _EEINDIK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.7289 2 430.721633 859.428712 94472.38 0.0023655 1.0189E-06 0.31186 0.00013432 0.31422 0.00013534 430.721784941007 434.72889318713 25.94 0.37215 25.94 25.743 26.115 0 76 18 6 0 0 0 0.037624 1 11494 60.76 8.742 1 1.5382 1.5065 0 22166000 8805100 13361000 7255 1914 2760 2830 11331 11331 EEIQENEEAVK 11 1 0 Unmodified _EEIQENEEAVK_ 0 0 0 Q9NYB0 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8207 2 659.312071 1316.60959 NaN NaN NaN -0.43283 -0.00028537 NaN NaN NaN NaN 26.425 0.23364 26.425 26.387 26.62 0 0 0 0 0.0015136 1 11903 82.749 53.276 1 NaN NaN 0 1924000 0 1924000 7256 2082 2761 2831 11332 11332 EEIQETQTPTHSR 13 0 1 Unmodified _EEIQETQTPTHSR_ 0 0 0 Q9BYG3;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.3762 2 778.370983 1554.72741 68631.3 0.69564 0.00054147 0.11022 8.5794E-05 0.80586 0.00062726 778.371143111048 783.375278022439 18.406 0.31904 18.406 18.279 18.598 0 81 12 10 0 0 0 1.0645E-38 1 5290 205.56 205.56 1 1.0358 1.2132 0 211660000 105330000 106330000 7257 2019 2762 2832 11333 11333 EEIQETQTPTHSR 13 0 1 Unmodified _EEIQETQTPTHSR_ 0 0 0 Q9BYG3;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.5862 3 519.249748 1554.72741 83052.69 0.45385 0.00023566 -0.42723 -0.00022184 0.026624 1.3824E-05 519.249685198967 522.585670644767 18.411 0.38572 18.411 18.279 18.664 0 92 15 10 0 0 0 2.3583E-19 1 5358 143.98 133.33 1 1.057 1.2367 0 206810000 100010000 106790000 7258 2019 2762 2832 11334 11334 EEIQETQTPTHSR 13 0 1 Unmodified _EEIQETQTPTHSR_ 0 0 0 Q9BYG3;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.3711 2 778.370983 1554.72741 68394.06 0.45334 0.00035287 -0.021006 -1.635E-05 0.43233 0.00033652 778.371039287995 783.375160377081 18.368 0.3688 18.368 18.264 18.633 0 55 12 10 0 0 0 2.3587E-238 3 5037 318.83 286.15 1 1.0217 1.1628 0 127050000 63088000 63964000 7259 2019 2762 2832 11335;11336;11337 11337 EEIQETQTPTHSR 13 0 1 Unmodified _EEIQETQTPTHSR_ 0 0 0 Q9BYG3;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.2495 3 519.249748 1554.72741 81795.17 0.22547 0.00011708 -0.40555 -0.00021058 -0.18008 -9.3506E-05 519.249735632421 522.585644644354 18.368 0.44718 18.368 18.202 18.649 0 61 17 10 0 0 0 1.1695E-30 2 5033 132.14 121.86 1 1.1072 1.2728 0 200700000 96545000 104150000 7260 2019 2762 2832 11338;11339 11338 EEIQETQTPTHSR 13 0 1 Unmodified _EEIQETQTPTHSR_ 0 0 0 Q9BYG3;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.8745 2 778.370983 1554.72741 68556.91 0.16568 0.00012896 0.33372 0.00025976 0.4994 0.00038872 778.3712297929 783.375355120545 19.736 0.44239 19.736 19.604 20.046 1.9073E-06 152 24 10 0 0 0 2.3684E-13 2 5320 127.87 127.87 1 1.2297 1.0466 0 35259000 15938000 19320000 7261 2019 2762 2832 11340;11341 11341 EEIQETQTPTHSR 13 0 1 Unmodified _EEIQETQTPTHSR_ 0 0 0 Q9BYG3;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.9202 3 519.249748 1554.72741 82914.31 -0.20685 -0.00010741 0.36517 0.00018961 0.15832 8.2209E-05 519.249959687686 522.586006607047 19.763 0.47983 19.763 19.585 20.065 0 149 26 10 0 0 0 1.539E-05 2 5327 96.734 92.104 1 1.2444 1.0626 0 38045000 17726000 20319000 7262 2019 2762 2832 11342;11343 11342 EEIQETQTPTHSR 13 0 1 Unmodified _EEIQETQTPTHSR_ 0 0 0 Q9BYG3;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 778.3708 2 778.370983 1554.72741 68617.3 0.12761 9.9327E-05 0.52987 0.00041243 0.65747 0.00051176 778.371414822359 783.375551981022 19.736 0.55566 19.736 19.566 20.122 0 170 26 11 0 0 0 3.952E-30 2 4832 166.29 166.29 1 1.2777 1.1145 0 35413000 15851000 19562000 7263 2019 2762 2832 11344;11345 11345 EEIQETQTPTHSR 13 0 1 Unmodified _EEIQETQTPTHSR_ 0 0 0 Q9BYG3;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.5861 3 519.249748 1554.72741 82460.17 -0.18431 -9.5701E-05 0.4395 0.00022821 0.2552 0.00013251 519.250136917109 522.586007305323 19.72 0.51441 19.72 19.566 20.081 0 161 25 10 0 0 0 1.6388E-05 2 4846 96.464 89.583 1 1.2264 1.0697 0 38026000 16961000 21065000 7264 2019 2762 2832 11346;11347 11346 EEIQSSISGVTAAYNR 16 0 1 Unmodified _EEIQSSISGVTAAYNR_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0;Q6P1N4;A0A087WWP1 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.9264 2 862.926123 1723.83769 68274.1 0.83088 0.00071699 -0.12698 -0.00010957 0.7039 0.00060742 863.427461734606 867.929983919878 76.038 0.37687 76.038 75.85 76.227 0 100 30 4 0 0 0 2.0345E-17 2 44751 128.36 115.38 1 1.4435 1.4711 0 14795000 6595900 8199100 7265 352 2763 2833 11348;11349 11348 EEIQSSISGVTAAYNR 16 0 1 Unmodified _EEIQSSISGVTAAYNR_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0;Q6P1N4;A0A087WWP1 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.9304 2 862.926123 1723.83769 67461.7 0.49332 0.0004257 0.2343 0.00020218 0.72762 0.00062788 863.428244119002 868.432400136713 75.177 0.46927 75.177 74.944 75.414 0 127 41 5 0 0 0 9.847E-09 2 45238 107.09 96.763 1 1.5255 1.5078 0 12580000 5172800 7407100 7266 352 2763 2833 11350;11351 11351 EEIQSSISGVTAAYNR 16 0 1 Unmodified _EEIQSSISGVTAAYNR_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0;Q6P1N4;A0A087WWP1 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 863.4339 2 862.926123 1723.83769 65602.16 0.39542 0.00034121 1.2715 0.0010972 1.6669 0.0014384 863.430502685844 867.93045631805 87.306 0.39551 87.306 87.131 87.526 0 89 22 6 0 0 0 0.012186 1 47972 32.567 32.567 1 0.80178 0.69644 0 2233700 1226700 1007000 7267 352 2763 2833 11352 11352 EEIQSSISGVTAAYNR 16 0 1 Unmodified _EEIQSSISGVTAAYNR_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0;Q6P1N4;A0A087WWP1 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 862.9261 2 862.926123 1723.83769 66768.2 0.38429 0.00033161 0.26115 0.00022535 0.64544 0.00055696 863.427516698926 867.931158016806 87.547 0.37704 87.547 87.303 87.68 0 93 21 6 0 0 0 0.025276 2 47259 26.112 25.718 1 0.95013 0.85677 0 2065900 1015800 1050100 7268 352 2763 2833 11353;11354 11353 EEISATQIIVCTPEK 15 1 0 Unmodified _EEISATQIIVCTPEK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.4449 2 859.437477 1716.8604 66977.31 0.83181 0.00071489 0.28389 0.00024398 1.1157 0.00095887 859.437913718022 863.444521833645 88.019 0.39014 88.019 87.888 88.278 0 82 30 4 0 0 0 0.00022603 2 53032 73.082 64.353 1 0.82045 0.85586 0 16787000 9157100 7630200 7269 1411 2764 2834 11355;11356 11355 EEISATQIIVCTPEK 15 1 0 Unmodified _EEISATQIIVCTPEK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 859.4377 2 859.437477 1716.8604 66772.98 0.70677 0.00060742 0.32022 0.00027521 1.027 0.00088263 859.939558408719 863.946449357687 87.249 0.36506 87.249 87.127 87.492 0 63 30 4 0 0 0 4.4612E-15 3 53722 127.56 127.56 1 0.87098 0.91275 0 10775000 5674100 5100900 7270 1411 2764 2834 11357;11358;11359 11357 EEISATQIIVCTPEK 15 1 0 Unmodified _EEISATQIIVCTPEK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 863.4427 2 859.437477 1716.8604 66582.77 0.3926 0.00033742 -0.29313 -0.00025192 0.099476 8.5494E-05 859.4376339264 863.443272870697 100.91 0.4888 100.91 100.71 101.19 0 147 32 6 0 0 0 0.00050188 2 57145 56.122 56.122 1 0.80283 0.63256 0 4042000 2467900 1574100 7271 1411 2764 2834 11360;11361 11361 EEISATQIIVCTPEK 15 1 0 Unmodified _EEISATQIIVCTPEK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 863.9449 2 859.437477 1716.8604 65826.48 0.41504 0.0003567 -0.71484 -0.00061436 -0.2998 -0.00025766 859.437410687258 863.443164869514 100.87 0.44139 100.87 100.64 101.08 0 162 32 7 0 0 0 0.029253 1 56133 27.672 27.672 1 0.93682 0.75111 0 4191400 2007700 2183700 7272 1411 2764 2834 11362 11362 EELAQFHR 8 0 1 Unmodified _EELAQFHR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8;B4E305 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.2633 2 515.259248 1028.50394 85252.8 0.5895 0.00030374 -1.511 -0.00077854 -0.92148 -0.0004748 515.2582951808 520.262566082129 28.806 0.28395 28.806 28.719 29.003 0 54 14 6 0 0 0 0.0022282 1 13739 101.69 42.486 1 2.1051 2.1726 0 24055000 7737700 16318000 7273 719 2765 2835 11363 11363 EELAYLK 7 1 0 Unmodified _EELAYLK_ 0 0 0 CON__P02533;P02533;A0A024R1X6;K7ELP7;CON__Q04695;Q04695;F5GWP8;Q14666;K7EPJ9;K7ESE1;B4DE59;K7EMS3 CON__P02533;CON__Q04695;B4DE59 CON__P02533 KRT14;KRT17;KRT19 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.2368 2 433.236919 864.459284 91012.71 -0.17788 -7.7065E-05 0.093615 4.0557E-05 -0.084268 -3.6508E-05 433.23682559987 437.244170236807 51.523 0.62247 51.523 51.315 51.938 -3.8147E-06 164 49 6 0 0 0 0.026804 1 29159 79.454 10.021 1 0.031933 0.036798 0 181820000 173730000 8088100 + 7274 1150;1168;964 2766 2836 11364 11364 EELAYLK 7 1 0 Unmodified _EELAYLK_ 0 0 0 CON__P02533;P02533;A0A024R1X6;K7ELP7;CON__Q04695;Q04695;F5GWP8;Q14666;K7EPJ9;K7ESE1;B4DE59;K7EMS3 CON__P02533;CON__Q04695;B4DE59 CON__P02533 KRT14;KRT17;KRT19 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 433.237 2 433.236919 864.459284 93367.35 -0.29217 -0.00012658 0.55035 0.00023843 0.25818 0.00011185 433.237035720024 437.244226922298 61.033 0.79062 61.033 60.788 61.579 0 206 69 5 0 0 0 0.052963 1 30573 53.71 8.7367 1 0.13039 0.10669 0 8437000 7411200 1025700 + 7275 1150;1168;964 2766 2836 11365 11365 EELDFQK 7 1 0 Unmodified _EELDFQK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.7209 2 454.721633 907.428712 88331.42 0.041118 1.8697E-05 0.17667 8.0336E-05 0.21779 9.9033E-05 454.721536724056 458.728602512771 39.674 0.87758 39.674 39.233 40.111 0 439 72 9 0 0 0 0.028486 1 20433 71.852 49.924 1 1.186 1.3677 0 216230000 98955000 117270000 7276 1440 2767 2837 11366 11366 EELDFQK 7 1 0 Unmodified _EELDFQK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.7293 2 454.721633 907.428712 88755.82 0.037454 1.7031E-05 0.34021 0.0001547 0.37767 0.00017173 454.721658661855 458.728675174356 38.693 0.95182 38.693 38.303 39.255 0 436 80 8 0 0 0 0.03394 1 20236 63.148 41.377 1 1.2405 1.4468 0 260490000 118570000 141920000 7277 1440 2767 2837 11367 11367 EELDFQK 7 1 0 Unmodified _EELDFQK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 458.7283 2 454.721633 907.428712 88733.59 0.32349 0.0001471 0.069528 3.1616E-05 0.39302 0.00017872 454.721523220985 458.728580592073 45.04 0.83614 45.04 44.569 45.405 0 344 60 8 0 0 0 0.044796 1 20883 57.463 48.691 1 1.4951 1.2166 0 7154500 3013400 4141000 7278 1440 2767 2837 11368 11368 EELEALFLPYDLK 13 1 0 Unmodified _EELEALFLPYDLK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.417 2 790.416339 1578.81813 68242.03 0.8849 0.00069944 -0.011875 -9.3861E-06 0.87303 0.00069005 790.416323696833 794.42341670519 127.66 0.94836 127.66 127.27 128.22 0 418 60 10 0 0 0 4.485E-49 2 83060 195.51 187.11 1 0.94698 1.0837 0 187040000 93361000 93682000 7279 2023 2768 2838 11369;11370 11370 EELEALFLPYDLK 13 1 0 Unmodified _EELEALFLPYDLK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.4177 2 790.416339 1578.81813 68591.6 0.92273 0.00072934 0.12089 9.5556E-05 1.0436 0.0008249 790.416379875991 794.42365761183 127.28 1.4758 127.28 126.4 127.87 0 440 92 11 0 0 0 1.4308E-23 2 84810 155.26 155.26 1 0.93508 1.0813 0 200690000 101400000 99291000 7280 2023 2768 2838 11371;11372 11372 EELEEMLVEK 10 1 0 Oxidation (M) _EELEEM(ox)LVEK_ EELEEM(1)LVEK EELEEM(92.84)LVEK 0 1 0 Q86WV4;P82933;H7BZC4 Q86WV4 Q86WV4 MRPS9 28S ribosomal protein S9, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.812 2 632.802494 1263.59043 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.482 1 59.482 58.982 59.982 0 0 0 0 1.1073E-05 1 33897 92.838 37.307 1 7281 1670 2769 2839 11373 11373 1472 EELEEMLVEK 10 1 0 Oxidation (M) _EELEEM(ox)LVEK_ EELEEM(1)LVEK EELEEM(83.95)LVEK 0 1 0 Q86WV4;P82933;H7BZC4 Q86WV4 Q86WV4 MRPS9 28S ribosomal protein S9, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8091 2 632.802494 1263.59043 NaN NaN NaN -0.91978 -0.00058204 NaN NaN NaN NaN 58.329 0.17762 58.329 58.274 58.451 3.8147E-06 0 0 0 0.00056272 1 33911 83.948 40.14 1 NaN NaN 0 8311200 0 8311200 7282 1670 2769 2839 11374 11374 1472 EELEEVIK 8 1 0 Unmodified _EELEEVIK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.7711 2 494.763497 987.512442 89261.67 0.14138 6.9948E-05 0.6225 0.00030799 0.76387 0.00037794 494.764091309886 498.770577101794 69.564 0.61038 69.564 69.227 69.837 0 99 41 4 0 0 0 0.057469 1 35769 41.025 34.986 1 1.9794 1.5526 0 2063500 650550 1413000 7283 595 2770 2840 11375 11375 EELEFEVPFR 10 0 1 Unmodified _EELEFEVPFR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.8246 2 647.819335 1293.62412 75517.25 1.2542 0.00081252 -0.21505 -0.00013931 1.0392 0.00067321 647.819235467335 652.823235823728 110.76 1.1045 110.76 110.24 111.35 0 407 77 10 0 0 0 2.8483E-09 2 69413 125.82 114.33 1 0.69094 0.81849 0 445520000 262070000 183450000 7284 2148 2771 2841 11376;11377 11377 EELEFEVPFR 10 0 1 Unmodified _EELEFEVPFR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.8245 2 647.819335 1293.62412 75609.76 0.95085 0.00061598 -0.22104 -0.00014319 0.72982 0.00047279 647.819227154461 652.823222403858 110.13 1.2643 110.13 109.66 110.92 7.6294E-06 410 87 11 0 0 0 1.6847E-08 3 70638 122.52 111.03 1 0.69065 0.80697 0 573310000 336120000 237180000 7285 2148 2771 2841 11378;11379;11380 11378 EELEFEVPFR 10 0 1 Unmodified _EELEFEVPFR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.3243 2 647.819335 1293.62412 76587.45 0.94704 0.00061351 -0.1526 -9.8858E-05 0.79443 0.00051465 647.819142253855 653.324690793229 122.44 0.27052 122.44 122.3 122.57 0 35 14 4 0 0 0 0.020939 1 73000 46.447 41.996 1 0.64006 0.56743 0 1322800 820880 501870 7286 2148 2771 2841 11381 11381 EELEFEVPFR 10 0 1 Unmodified _EELEFEVPFR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.8198 2 647.819335 1293.62412 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.22 1 122.22 121.72 122.72 0 0 0 0 0.012417 1 71954 56.563 42.56 1 7287 2148 2771 2841 11382 11382 EELEQASQAHGAR 13 0 1 Unmodified _EELEQASQAHGAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.8406 2 713.339486 1424.66442 71177.41 0.54853 0.00039129 0.61171 0.00043635 1.1602 0.00082765 713.340242759796 718.34354240244 17.443 0.35103 17.443 17.266 17.617 -1.9073E-06 75 13 8 0 0 0 7.0122E-61 2 4584 205.53 166.51 1 1.0085 1.0317 0 19013000 10705000 8308400 7288 186;1747;718 2772 2842 11383;11384 11384 EELEQASQAHGAR 13 0 1 Unmodified _EELEQASQAHGAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.8951 3 475.895416 1424.66442 87068.14 0.012262 5.8353E-06 0.27434 0.00013056 0.2866 0.00013639 475.895397545613 479.231405411915 17.451 0.45768 17.451 17.225 17.683 0 87 16 9 0 0 0 1.0521E-05 2 4600 93.623 77.867 1 0.90308 0.92307 0 26509000 13834000 12675000 7289 186;1747;718 2772 2842 11385;11386 11386 EELEQASQAHGAR 13 0 1 Unmodified _EELEQASQAHGAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.8957 3 475.895416 1424.66442 86433.14 -0.26988 -0.00012843 0.35181 0.00016742 0.081925 3.8988E-05 475.895547105247 479.231640247228 17.391 0.47161 17.391 17.132 17.604 -1.9073E-06 89 15 8 0 0 0 2.9119E-19 2 4327 116.24 102.27 1 0.76302 0.83786 0 40427000 23142000 17285000 7290 186;1747;718 2772 2842 11387;11388 11387 EELEQASQAHGAR 13 0 1 Unmodified _EELEQASQAHGAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.3398 2 713.339486 1424.66442 71893.05 0.26293 0.00018756 0.54954 0.00039201 0.81247 0.00057957 713.340076279518 718.343651910163 17.393 0.47161 17.393 17.132 17.604 0 70 15 8 0 0 0 4.457E-89 2 4350 233.54 189.19 1 1.067 1.2067 0 47587000 25517000 22069000 7291 186;1747;718 2772 2842 11389;11390 11389 EELEQASQAHGAR 13 0 1 Unmodified _EELEQASQAHGAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.3438 2 713.339486 1424.66442 71124.84 0.27205 0.00019406 0.020746 1.4799E-05 0.29279 0.00020886 713.339739540181 718.34370083916 18.679 0.39679 18.679 18.482 18.879 0 65 15 8 0 0 0 1.3334E-13 3 4620 132.25 108.22 1 1.2811 1.0897 0 9086500 4065300 5021300 7292 186;1747;718 2772 2842 11391;11392;11393 11392 EELEQASQAHGAR 13 0 1 Unmodified _EELEQASQAHGAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.8958 3 475.895416 1424.66442 86345.79 -0.19974 -9.5058E-05 0.31395 0.00014941 0.11421 5.4351E-05 475.895641685717 479.231652282044 18.681 0.36086 18.681 18.543 18.904 0 66 13 8 0 0 0 8.6292E-05 2 4609 53.754 39.79 1 1.3424 1.1482 0 8722300 3910400 4811900 7293 186;1747;718 2772 2842 11394;11395 11395 EELEQASQAHGAR 13 0 1 Unmodified _EELEQASQAHGAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 479.2312 3 475.895416 1424.66442 85671.01 -0.13148 -6.2572E-05 0.053762 2.5585E-05 -0.077721 -3.6987E-05 475.895481026156 479.23153393632 18.612 0.3122 18.612 18.482 18.794 0 104 17 9 0 0 0 0.0030336 2 4130 46.88 39.155 1 1.4889 1.2392 0 7226700 2958300 4268400 7294 186;1747;718 2772 2842 11396;11397 11396 EELEQASQAHGAR 13 0 1 Unmodified _EELEQASQAHGAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.3394 2 713.339486 1424.66442 70301.25 0.17807 0.00012703 0.10044 7.1649E-05 0.27852 0.00019868 713.339773077869 718.343704505978 18.614 0.37177 18.614 18.4 18.772 0 100 20 10 0 0 0 1.4777E-23 2 4147 155 134.86 1 1.452 1.203 0 7883200 3245600 4637600 7295 186;1747;718 2772 2842 11398;11399 11399 EELEQTYHAK 10 1 0 Unmodified _EELEQTYHAK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.5349 3 416.534937 1246.58298 93066.09 0.34917 0.00014544 -0.021348 -8.8921E-06 0.32782 0.00013655 416.534784674185 419.206459222312 20.557 0.50428 20.557 20.324 20.829 0 47 15 6 0 0 0 0.00072773 1 6865 59.426 56.203 1 1.1378 1.188 0 24341000 12431000 11910000 7296 1502 2773 2843 11400 11400 EELEQTYHAK 10 1 0 Unmodified _EELEQTYHAK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.3054 2 624.298767 1246.58298 76141.69 0.2435 0.00015202 0.034993 2.1846E-05 0.27849 0.00017386 624.298885113514 628.305736442202 22.629 0.51228 22.629 22.355 22.867 -1.9073E-06 91 16 7 0 0 0 1.9962E-10 2 6803 137.14 137.14 1 1.0547 0.85576 0 13190000 6958700 6231300 7297 1502 2773 2843 11401;11402 11401 EELFIEQK 8 1 0 Unmodified _EELFIEQK_ 0 0 0 A0A024QZW2;Q9UMY1;H7C2B1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.2722 2 518.27149 1034.52843 84289.4 0.40346 0.0002091 -0.46109 -0.00023897 -0.057627 -2.9866E-05 518.271347496028 522.278111862325 59.283 0.36134 59.283 59.106 59.468 3.8147E-06 74 32 4 0 0 0 0.0080127 1 34550 80.462 58.534 1 1.0712 1.1069 0 11425000 6137600 5286900 7298 30 2774 2844 11403 11403 EELGFRPEYSASQLK 15 1 1 Unmodified _EELGFRPEYSASQLK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.6317 3 585.296698 1752.86826 77399.59 0.68808 0.00040273 -0.097478 -5.7053E-05 0.5906 0.00034568 585.296790135709 591.638784756847 71.688 0.90103 71.688 71.357 72.258 0 388 74 8 0 0 0 0.0023833 1 41728 37.177 23.758 1 0.61704 0.73784 0 54481000 35645000 18836000 7299 139 2775 2845 11404 11404 EELGFRPEYSASQLK 15 1 1 Unmodified _EELGFRPEYSASQLK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.2979 3 585.296698 1752.86826 78467.93 0.52935 0.00030983 0.14344 8.3958E-05 0.67279 0.00039378 585.631047937054 591.638743532353 70.185 0.74754 70.185 69.937 70.685 0 328 60 7 0 0 0 0.0001014 1 41776 63.128 44.306 1 0.71795 0.84486 0 79196000 40516000 38681000 7300 139 2775 2845 11405 11405 EELGFRPEYSASQLK 15 1 1 Unmodified _EELGFRPEYSASQLK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.6315 3 585.296698 1752.86826 79061.63 0.44455 0.00026019 -0.059213 -3.4657E-05 0.38534 0.00022554 585.296677212804 591.638782597771 81.995 0.68532 81.995 81.669 82.354 0 235 40 8 0 0 0 0.0022307 1 43655 38.116 22.296 1 1.1352 0.95148 0 6139100 3048300 3090800 7301 139 2775 2845 11406 11406 EELGLIEQAYDNPHEALSR 19 0 1 Unmodified _EELGLIEQAYDNPHEALSR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.0001 3 728.690435 2183.04948 71058.3 0.9615 0.00070063 -0.20222 -0.00014735 0.75928 0.00055328 729.024510728428 732.0263859035 91.422 0.6423 91.422 91.054 91.696 0 319 52 8 0 0 0 5.9631E-13 2 55212 109.89 101.24 1 0.74629 0.82745 0 66161000 41843000 24318000 7302 1854 2776 2846 11407;11408 11408 EELGLIEQAYDNPHEALSR 19 0 1 Unmodified _EELGLIEQAYDNPHEALSR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1097.5383 2 1092.53201 2183.04948 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.44 1 91.44 90.94 91.94 0 0 0 0 0.00029953 1 55352 57.804 37.341 1 7303 1854 2776 2846 11409 11409 EELGLIEQAYDNPHEALSR 19 0 1 Unmodified _EELGLIEQAYDNPHEALSR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.3626 3 728.690435 2183.04948 70943.73 1.2544 0.00091406 -0.27066 -0.00019723 0.98373 0.00071684 729.024504735831 732.361227155273 90.516 0.71815 90.516 90.134 90.852 0 384 59 10 0 0 0 1.0656E-06 1 55807 82.586 77.608 1 0.83554 0.96044 0 76859000 39025000 37834000 7304 1854 2776 2846 11410 11410 EELGLIEQAYDNPHEALSR 19 0 1 Unmodified _EELGLIEQAYDNPHEALSR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1097.5363 2 1092.53201 2183.04948 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.434 1 90.434 89.934 90.934 0 0 0 0 0.00010314 1 55909 66.285 45.332 1 7305 1854 2776 2846 11411 11411 EELGLIEQAYDNPHEALSR 19 0 1 Unmodified _EELGLIEQAYDNPHEALSR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.36 3 728.690435 2183.04948 NaN NaN NaN -0.44575 -0.00032481 NaN NaN NaN NaN 104.62 0.52132 104.62 104.38 104.91 0 0 0 0 1.2655E-06 1 59604 70.114 66.673 1 NaN NaN 0 3754100 0 3754100 7306 1854 2776 2846 11412 11412 EELGRPATLLWLIQK 15 1 1 Unmodified _EELGRPATLLWLIQK_ 0 0 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.6773 3 589.676962 1766.00906 80748.13 0.86844 0.0005121 -0.012009 -7.0813E-06 0.85643 0.00050502 589.676978926972 595.68429847323 116.55 0.58335 116.55 116.27 116.85 7.6294E-06 157 40 5 0 0 0 0.00036057 1 74359 50.155 50.155 1 1.1417 1.2235 0 13479000 6387800 7091100 7307 1412 2777 2847 11413 11413 EELGRPATLLWLIQK 15 1 1 Unmodified _EELGRPATLLWLIQK_ 0 0 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.6846 3 589.676962 1766.00906 81166.95 0.92892 0.00054776 -0.43741 -0.00025793 0.49151 0.00028983 590.010992376819 596.018596929159 115.63 0.60902 115.63 115.33 115.94 -7.6294E-06 197 39 7 0 0 0 0.00079298 2 75350 46.964 46.964 1 1.2188 1.385 0 18261000 9670000 8591200 7308 1412 2777 2847 11414;11415 11414 EELGRPATLLWLIQK 15 1 1 Unmodified _EELGRPATLLWLIQK_ 0 0 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.6844 3 589.676962 1766.00906 78396.79 0.6068 0.00035782 0.1588 9.364E-05 0.7656 0.00045146 590.01127518489 595.684561737107 127.03 0.46442 127.03 126.78 127.24 0 103 19 8 0 0 0 0.00036057 2 76439 50.155 49.406 1 1.9746 1.6276 0 4232700 1647700 2585000 7309 1412 2777 2847 11416;11417 11416 EELGRPATLLWLIQK 15 1 1 Unmodified _EELGRPATLLWLIQK_ 0 0 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.6844 3 589.676962 1766.00906 79036.97 0.58414 0.00034445 0.24363 0.00014366 0.82777 0.00048812 590.0113196256 595.684599962982 126.78 0.44838 126.78 126.53 126.97 -7.6294E-06 89 19 7 0 0 0 0.033226 1 75319 22.154 22.154 1 1.521 1.2806 0 4202500 1432200 2770300 7310 1412 2777 2847 11418 11418 EELIAELQDCEGLIVR 16 0 1 Unmodified _EELIAELQDCEGLIVR_ 0 0 0 O43175;V9HW79 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 948.9839 2 943.980041 1885.94553 61835.45 0.63166 0.00059627 1.2423 0.0011727 1.874 0.001769 943.982232039302 949.486846422526 130.28 0.43977 130.28 130.06 130.5 0 101 21 8 0 0 0 2.6627E-05 4 78856 85.554 85.554 1 1.61 1.3692 0 5338900 2053800 3285100 7311 1382 2778 2848 11419;11420;11421;11422 11419 EELIAELQDCEGLIVR 16 0 1 Unmodified _EELIAELQDCEGLIVR_ 0 0 0 O43175;V9HW79 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 948.9852 2 943.980041 1885.94553 61592.55 0.9762 0.00092152 0.31975 0.00030184 1.296 0.0012234 943.980595252072 948.984183811788 130.12 0.60602 130.12 129.91 130.52 0 80 24 7 0 0 0 0.0023212 2 77871 41.401 41.401 1 1.4444 1.1739 0 9927600 3635100 6292500 7312 1382 2778 2848 11423;11424 11423 EELLAEFGSGTLDLPALTR 19 0 1 Unmodified _EELLAEFGSGTLDLPALTR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1022.0392 2 1016.53349 2031.05244 61584.53 0.51182 0.00052028 -0.23428 -0.00023815 0.27754 0.00028213 1017.03430885113 1021.53759154428 131.5 0.65785 131.5 131.19 131.84 -1.5259E-05 289 43 9 0 0 0 2.9179E-51 3 85779 171.76 171.76 1 2.1755 2.4192 0 75464000 23682000 51782000 7313 397;1622 2779 2849 11425;11426;11427 11426 EELLAEFGSGTLDLPALTR 19 0 1 Unmodified _EELLAEFGSGTLDLPALTR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1016.5358 2 1016.53349 2031.05244 61076.2 0.65782 0.0006687 -0.32456 -0.00032993 0.33326 0.00033877 1016.53274525667 1021.53742430878 131.1 0.63322 131.1 130.78 131.41 0 351 48 11 0 0 0 1.5899E-22 2 87570 129.77 129.77 1 2.2098 2.5152 0 111840000 33998000 77845000 7314 397;1622 2779 2849 11428;11429 11428 EELLAVGK 8 1 0 Unmodified _EELLAVGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.7572 2 429.750193 857.485833 90672.63 -0.036217 -1.5564E-05 0.48114 0.00020677 0.44492 0.0001912 429.750497430619 433.757208292048 53.733 0.88378 53.733 53.443 54.327 0 473 69 10 0 0 0 0.0078194 2 30050 81.297 26.772 1 1.6939 2.0536 0 2037100000 778020000 1259100000 7315 1569 2780 2850 11430;11431 11430 EELLAVGK 8 1 0 Unmodified _EELLAVGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 429.7504 2 429.750193 857.485833 91848.03 0.14271 6.1329E-05 -0.30295 -0.00013019 -0.16024 -6.8863E-05 429.750433694036 433.756710874596 52.447 1.0327 52.447 52.082 53.115 0 611 81 13 0 0 0 0.010479 2 29803 72.138 23.965 1 1.7064 2.0185 0 1830000000 756690000 1073300000 7316 1569 2780 2850 11432;11433 11433 EELLAVGK 8 1 0 Unmodified _EELLAVGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 429.7502 2 429.750193 857.485833 91453.41 -0.24339 -0.0001046 0.27989 0.00012028 0.036502 1.5687E-05 429.750418969901 433.757293835328 61.149 1.5844 61.149 60.773 62.357 0 617 129 9 0 0 0 0.0077064 3 31211 81.784 24.32 1 3.1632 2.7511 0 145050000 33577000 111480000 7317 1569 2780 2850 11434;11435;11436 11435 EELLAVGK 8 1 0 Unmodified _EELLAVGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 433.7571 2 429.750193 857.485833 90765.44 -0.3498 -0.00015033 -0.035061 -1.5067E-05 -0.38486 -0.00016539 429.750444734755 433.757111032842 61.551 1.7665 61.551 61.108 62.874 -3.8147E-06 669 134 10 0 0 0 0.052285 2 30701 42.914 18.095 1 3.1333 2.6852 0 129370000 31196000 98173000 7318 1569 2780 2850 11437;11438 11437 EELLEYEEK 9 1 0 Unmodified _EELLEYEEK_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.2892 2 591.282251 1180.54995 NaN NaN NaN -0.2606 -0.00015409 NaN NaN NaN NaN 56.505 0.40787 56.505 56.35 56.758 0 0 0 0 3.0873E-07 1 31848 120.15 87.314 1 NaN NaN 0 10984000 0 10984000 7319 613 2781 2851 11439 11439 EELLFMK 7 1 0 Oxidation (M) _EELLFM(ox)K_ EELLFM(1)K EELLFM(80.56)K 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.2384 2 463.238604 924.462655 87454.13 0.3415 0.00015819 -0.3926 -0.00018187 -0.051105 -2.3674E-05 463.238309069218 467.245436145057 63.859 1.4163 63.859 63.107 64.523 -3.8147E-06 636 132 6 0 0 0 0.013005 2 36444 80.555 54.997 1 1.4051 1.5863 0 136790000 57006000 79781000 + 7320 316;1155 2782 2852 11440;11441 11440 234 EELLFMK 7 1 0 Oxidation (M) _EELLFM(ox)K_ EELLFM(1)K EELLFM(73.04)K 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2386 2 463.238604 924.462655 87985.51 0.21678 0.00010042 -0.12819 -5.9384E-05 0.088588 4.1037E-05 463.238489620789 467.245504236134 62.527 1.6193 62.527 61.604 63.223 -3.8147E-06 586 148 6 0 0 0 0.013441 2 36473 73.039 55.344 1 1.4164 1.6364 0 195740000 78726000 117010000 + 7321 316;1155 2782 2852 11442;11443 11442 234 EELLFMK 7 1 0 Unmodified _EELLFMK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2408 2 455.241147 908.46774 91618.88 0.42217 0.00019219 -0.15722 -7.1572E-05 0.26495 0.00012062 455.241100672654 459.248156737671 86.58 0.54108 86.58 86.335 86.876 0 137 39 5 0 0 0 0.040059 1 52217 59.641 49.868 1 0.8273 0.84147 0 27952000 15177000 12775000 + 7322 316;1155 2782 2853 11444 11444 EELLFMK 7 1 0 Unmodified _EELLFMK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.2411 2 455.241147 908.46774 90914.35 0.30891 0.00014063 -0.17598 -8.0114E-05 0.13293 6.0514E-05 455.241056189553 459.248084334248 85.574 0.52276 85.574 85.263 85.786 0 133 39 4 0 0 0 0.038498 1 52732 60.358 60.358 1 0.89949 0.90738 0 26922000 14448000 12475000 + 7323 316;1155 2782 2853 11445 11445 EELLFMKK 8 2 0 Oxidation (M) _EELLFM(ox)KK_ EELLFM(1)KK EELLFM(81.78)KK 0 1 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.3005 2 527.286085 1052.55762 82721.73 0.50284 0.00026514 0.18488 9.7483E-05 0.68771 0.00036262 527.286391524356 535.300180451527 40.372 0.38871 40.372 40.156 40.545 0 130 33 5 0 0 0 0.017781 1 21081 81.784 81.784 1 1.135 1.34 0 50842000 25689000 25153000 + 7324 316;1155 2783 2854 11446 11446 234 EELLFMKK 8 2 0 Oxidation (M) _EELLFM(ox)KK_ EELLFM(1)KK EELLFM(64.8)KK 0 1 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.3005 2 527.286085 1052.55762 82787.5 0.464 0.00024466 0.013503 7.1201E-06 0.47751 0.00025178 527.286383794797 535.300103793448 38.994 0.53734 38.994 38.763 39.3 0 133 41 4 0 0 0 0.031516 1 20561 64.803 64.803 1 1.3183 1.5257 0 44857000 14797000 30060000 + 7325 316;1155 2783 2854 11447 11447 234 EELLHSEK 8 1 0 Unmodified _EELLHSEK_ 0 0 0 Q9NY93;Q53HB9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.7607 2 492.753464 983.492375 85011.79 0.12344 6.0825E-05 0.64626 0.00031845 0.7697 0.00037927 492.753510744298 496.760930321977 20.405 0.42251 20.405 20.237 20.66 0 85 18 7 0 0 0 1.2949E-09 2 6808 161.9 97.095 1 0.92015 1.0381 0 78196000 40388000 37808000 7326 2081 2784 2855 11448;11449 11448 EELLHSEK 8 1 0 Unmodified _EELLHSEK_ 0 0 0 Q9NY93;Q53HB9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.7535 2 492.753464 983.492375 85864.91 0.1411 6.9525E-05 0.18028 8.8834E-05 0.32138 0.00015836 492.753346018922 496.760511210477 20.15 0.41966 20.15 19.997 20.417 0 54 14 7 0 0 0 0.0010963 2 6519 112.17 28.37 1 0.88951 0.90787 0 31301000 14945000 16356000 7327 2081 2784 2855 11450;11451 11450 EELLHSEK 8 1 0 Unmodified _EELLHSEK_ 0 0 0 Q9NY93;Q53HB9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.7607 2 492.753464 983.492375 85062.71 -0.15619 -7.6962E-05 0.26367 0.00012992 0.10748 5.2962E-05 492.753566736982 496.760682861365 21.604 0.37707 21.604 21.442 21.819 0 64 12 8 0 0 0 0.00099026 2 6592 119.41 50.023 1 1.2626 0.98895 0 11603000 5229200 6373400 7328 2081 2784 2855 11452;11453 11453 EELLQVVEAMK 11 1 0 Unmodified _EELLQVVEAMK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.8467 2 644.844496 1287.67444 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.39 1 111.39 110.89 111.89 0 0 0 0 0.019637 1 71868 53.683 33.353 1 7329 1421 2785 2856 11454 11454 EELLQVVEAMK 11 1 0 Unmodified _EELLQVVEAMK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.8521 2 644.844496 1287.67444 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.55 1 123.55 123.05 124.05 7.6294E-06 0 0 0 8.9266E-07 1 73887 105.2 81.24 1 7330 1421 2785 2856 11455 11455 EELLQVVEAMK 11 1 0 Unmodified _EELLQVVEAMK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.8516 2 644.844496 1287.67444 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.48 1 123.48 122.98 123.98 0 0 0 0 4.6049E-05 1 72924 83.456 61.949 1 7331 1421 2785 2856 11456 11456 EELLQVVEAMK 11 1 0 Oxidation (M) _EELLQVVEAM(ox)K_ EELLQVVEAM(1)K EELLQVVEAM(43.28)K 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.8428 2 652.841953 1303.66935 NaN NaN NaN 0.11745 7.6674E-05 NaN NaN NaN NaN 123.47 0.44328 123.47 123.19 123.64 0 0 0 0 0.016611 1 72870 43.282 28.615 1 NaN NaN 0 787170 787170 0 7332 1421 2785 2857 11457 11457 1114 EELMSSDLEETAGSTSIPK 19 1 0 Oxidation (M) _EELM(ox)SSDLEETAGSTSIPK_ EELM(1)SSDLEETAGSTSIPK EELM(130.61)SSDLEETAGSTSIPK 0 1 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1024.4756 2 1020.4699 2038.92525 59671.45 0.38989 0.00039787 0.22915 0.00023384 0.61904 0.00063171 1020.9717127595 1024.4774290766 75.998 0.73305 75.998 75.709 76.442 0 453 60 10 0 0 0 6.91E-23 2 44589 130.61 130.61 1 1.1333 1.2779 0 130020000 60756000 69263000 7333 785 2786 2858 11458;11459 11458 619 EELMSSDLEETAGSTSIPK 19 1 0 Oxidation (M) _EELM(ox)SSDLEETAGSTSIPK_ EELM(1)SSDLEETAGSTSIPK EELM(94.55)SSDLEETAGSTSIPK 0 1 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1020.4703 2 1020.4699 2038.92525 59307.59 0.1931 0.00019706 0.18645 0.00019027 0.37955 0.00038732 1020.97156173885 1024.47737093624 75.311 0.78007 75.311 74.864 75.644 0 537 69 10 0 0 0 1.3579E-08 1 45132 94.551 94.551 1 1.0813 1.2308 0 147680000 74985000 72691000 7334 785 2786 2858 11460 11460 619 EELMSSDLEETAGSTSIPK 19 1 0 Oxidation (M) _EELM(ox)SSDLEETAGSTSIPK_ EELM(1)SSDLEETAGSTSIPK EELM(63.76)SSDLEETAGSTSIPK 0 1 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1020.472 2 1020.4699 2038.92525 60661.97 0.27527 0.0002809 0.39536 0.00040345 0.67063 0.00068435 1020.97208565581 1024.47661817356 75.689 0.12543 75.689 75.624 75.75 0 23 10 4 0 0 0 8.7354E-06 2 45637 63.76 63.76 1 0.58949 0.59753 0 9065700 6290000 2775700 7335 785 2786 2858 11461;11462 11462 619 EELMSSDLEETAGSTSIPK 19 1 0 Oxidation (M) _EELM(ox)SSDLEETAGSTSIPK_ EELM(1)SSDLEETAGSTSIPK EELM(49.93)SSDLEETAGSTSIPK 0 1 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1024.981 2 1020.4699 2038.92525 59479.32 0.24681 0.00025186 -0.085729 -8.7484E-05 0.16108 0.00016438 1020.46992107862 1024.47700703797 87.473 1.0478 87.473 86.935 87.983 0 406 60 10 0 0 0 2.0044E-05 2 47933 49.929 49.929 1 0.74143 0.60799 0 36691000 20748000 15943000 7336 785 2786 2858 11463;11464 11464 619 EELMSSDLEETAGSTSIPK 19 1 0 Unmodified _EELMSSDLEETAGSTSIPK_ 0 0 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1012.9743 2 1012.47244 2022.93033 NaN NaN NaN 0.24911 0.00025222 NaN NaN NaN NaN 102.37 0.90424 102.37 102.08 102.99 0 0 0 0 0.00021049 1 57189 61.212 55.179 1 NaN NaN 0 7111700 7111700 0 7337 785 2786 2859 11465 11465 EELNAISGPNEFAEFYNR 18 0 1 Unmodified _EELNAISGPNEFAEFYNR_ 0 0 0 Q53HM6;B3KY12;A8K7V1;A8K566;Q12874 Q53HM6 Q53HM6 SF3A3 Splicing factor 3A subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.4888 2 1050.48708 2098.9596 NaN NaN NaN 0.85518 0.00089836 NaN NaN NaN NaN 109.62 0.40801 109.62 109.42 109.83 0 0 0 0 0.00062353 1 68675 56.951 42.694 1 NaN NaN 0 5221800 0 5221800 7338 747 2787 2860 11466 11466 EELNAISGPNEFAEFYNR 18 0 1 Unmodified _EELNAISGPNEFAEFYNR_ 0 0 0 Q53HM6;B3KY12;A8K7V1;A8K566;Q12874 Q53HM6 Q53HM6 SF3A3 Splicing factor 3A subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1055.4939 2 1050.48708 2098.9596 NaN NaN NaN -0.056576 -5.9432E-05 NaN NaN NaN NaN 109.14 0.277 109.14 108.97 109.24 0 0 0 0 0.0004567 1 69965 59.898 54.053 1 NaN NaN 0 5051900 0 5051900 7339 747 2787 2860 11467 11467 EELNAISGPNEFAEFYNR 18 0 1 Unmodified _EELNAISGPNEFAEFYNR_ 0 0 0 Q53HM6;B3KY12;A8K7V1;A8K566;Q12874 Q53HM6 Q53HM6 SF3A3 Splicing factor 3A subunit 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1055.9819 2 1050.48708 2098.9596 NaN NaN NaN -2.0635 -0.0021677 NaN NaN NaN NaN 120.55 0.14595 120.55 120.42 120.56 0 0 0 0 0.044311 1 70625 30.484 22.94 1 NaN NaN 0 1701300 0 1701300 7340 747 2787 2860 11468 11468 EELPVIPK 8 1 0 Unmodified _EELPVIPK_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7813 2 462.773668 923.532783 87415.29 0.12978 6.0058E-05 0.1834 8.4875E-05 0.31318 0.00014493 462.773693180682 466.780718049291 72.306 0.57471 72.306 72.075 72.649 0 247 42 8 0 0 0 0.016916 2 42237 60.788 45.349 1 0.74081 0.85581 0 223680000 128110000 95571000 7341 2037 2788 2861 11469;11470 11470 EELPVIPK 8 1 0 Unmodified _EELPVIPK_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7807 2 462.773668 923.532783 88232.79 0.19096 8.8371E-05 0.05389 2.4939E-05 0.24485 0.00011331 462.773637147381 466.780643143382 70.994 0.57915 70.994 70.76 71.34 -7.6294E-06 233 42 8 0 0 0 0.016916 2 42367 60.788 45.349 1 0.7132 0.82948 0 236980000 135350000 101630000 7342 2037 2788 2861 11471;11472 11471 EELPVIPK 8 1 0 Unmodified _EELPVIPK_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 462.7738 2 462.773668 923.532783 88729.23 0.25926 0.00011998 0.018457 8.5413E-06 0.27772 0.00012852 462.773608060669 466.780642883075 82.44 1.11 82.44 82.131 83.241 0 318 66 9 0 0 0 0.013659 2 44718 64.803 52.447 1 0.48666 0.40057 0 39970000 27212000 12758000 7343 2037 2788 2861 11473;11474 11474 EELPVIPK 8 1 0 Unmodified _EELPVIPK_ 0 0 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.7811 2 462.773668 923.532783 88267.14 0.033417 1.5464E-05 0.17007 7.8702E-05 0.20348 9.4166E-05 462.773704699956 466.780699429794 82.544 1.0839 82.544 82.244 83.328 0 283 62 8 0 0 0 0.014565 1 43971 62.714 53.474 1 0.48556 0.40401 0 38947000 26009000 12939000 7344 2037 2788 2861 11475 11475 EELRELNDR 9 0 2 Unmodified _EELRELNDR_ 0 0 1 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5;Q03252 P20700;Q03252 P20700 LMNB1;LMNB2 Lamin-B1;Lamin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 391.8672 3 391.866798 1172.57856 96802.66 -0.083983 -3.291E-05 0.018109 7.0962E-06 -0.065875 -2.5814E-05 391.866824493188 398.538849807445 24.081 0.28964 24.081 23.958 24.248 0 35 11 4 0 0 0 0.0031132 1 9929 63.076 50.46 1 1.273 1.2523 0 5577100 2951300 2625800 7345 1502;1682 2789 2862 11476 11476 EELRLEEAK 9 1 1 Unmodified _EELRLEEAK_ 0 0 1 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;C9JHD7;C9JJK9 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.7986 2 558.798403 1115.58225 84581.78 0.59756 0.00033391 0.17569 9.8177E-05 0.77325 0.00043209 558.798832548883 567.809535192122 29.585 0.26095 29.585 29.431 29.692 0 60 21 6 0 0 0 1.2321E-16 2 14329 185.81 122.25 1 0.61064 0.71902 0 34063000 20331000 13732000 7346 229 2790 2863 11477;11478 11477 EELRLEEAK 9 1 1 Unmodified _EELRLEEAK_ 0 0 1 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;C9JHD7;C9JJK9 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.798 2 558.798403 1115.58225 84423.87 0.62693 0.00035033 -0.28447 -0.00015896 0.34245 0.00019136 558.798595026774 567.80911301818 29.097 0.23365 29.097 28.971 29.205 0 47 14 6 0 0 0 6.9332E-11 2 13938 174.92 108.84 1 0.56161 0.65328 0 40744000 24665000 16079000 7347 229 2790 2863 11479;11480 11480 EELRLEEAK 9 1 1 Unmodified _EELRLEEAK_ 0 0 1 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;C9JHD7;C9JJK9 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.8098 2 558.798403 1115.58225 79673.52 0.44017 0.00024597 -0.71367 -0.0003988 -0.27349 -0.00015283 558.798777701862 567.809105816868 33.575 0.35504 33.575 33.403 33.758 0 92 27 5 0 0 0 0.025211 1 14226 66.692 31.397 1 1.8757 1.571 0 5894600 1888100 4006600 7348 229 2790 2863 11481 11481 EELSAILK 8 1 0 Unmodified _EELSAILK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.7625 2 451.7633 901.512048 NaN NaN NaN 0.44711 0.00020199 NaN NaN NaN NaN 73.636 0.31133 73.636 73.51 73.822 0 0 0 0 0.023558 1 43200 63.21 21.318 1 NaN NaN 0 5692900 5692900 0 7349 1366 2791 2864 11482 11482 EELSAILK 8 1 0 Unmodified _EELSAILK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.7707 2 451.7633 901.512048 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.633 1 73.633 73.133 74.133 0 0 0 0 0.051419 1 43187 54.205 18.572 1 7350 1366 2791 2864 11483 11483 EELSAILK 8 1 0 Unmodified _EELSAILK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.7722 2 451.7633 901.512048 NaN NaN NaN -1.2815 -0.00057893 NaN NaN NaN NaN 72.254 0.36787 72.254 72.071 72.439 0 0 0 0 0.039261 2 43389 54.157 19.635 1 NaN NaN 0 6510100 0 6510100 7351 1366 2791 2864 11484;11485 11485 EELSALVAPAFAHTSQVLVDK 21 1 0 Unmodified _EELSALVAPAFAHTSQVLVDK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.0698 3 742.398593 2224.17395 71353.53 0.87544 0.00064993 -0.048548 -3.6042E-05 0.82689 0.00061388 742.732869311069 745.070182441172 114.26 0.41293 114.26 114.06 114.47 -7.6294E-06 159 28 7 0 0 0 1.291E-07 1 74281 59.585 59.585 1 0.99558 1.0048 0 13273000 6832600 6440600 7352 1259 2792 2865 11486 11486 EELSAVER 8 0 1 Unmodified _EELSAVER_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.7425 2 466.737814 931.461075 86054.18 0.2326 0.00010857 0.22883 0.0001068 0.46143 0.00021537 466.737860925075 471.741740010246 29.027 0.4556 29.027 28.85 29.305 0 123 25 8 0 0 0 0.00095514 2 13877 124.08 28.459 1 1.6613 1.9668 0 376170000 139430000 236740000 7353 1569 2793 2866 11487;11488 11488 EELSAVER 8 0 1 Unmodified _EELSAVER_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7385 2 466.737814 931.461075 84991.97 0.15075 7.0363E-05 0.31308 0.00014613 0.46384 0.00021649 466.738036131765 471.741717040646 28.301 0.46165 28.301 28.13 28.591 0 107 30 8 0 0 0 8.434E-05 2 13474 137.18 40.108 1 1.3894 1.6197 0 475560000 192700000 282860000 7354 1569 2793 2866 11489;11490 11490 EELSAVER 8 0 1 Unmodified _EELSAVER_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.7417 2 466.737814 931.461075 85036.8 0.0014905 6.9566E-07 0.018899 8.8209E-06 0.02039 9.5166E-06 466.737812121114 471.741663758855 32.824 0.6562 32.824 32.378 33.034 0 149 32 8 0 0 0 0.0091076 2 14272 75.738 23.462 1 2.9552 2.5492 0 77624000 20613000 57011000 7355 1569 2793 2866 11491;11492 11492 EELSAVER 8 0 1 Unmodified _EELSAVER_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.738 2 466.737814 931.461075 84155.83 0.1956 9.1293E-05 0.082371 3.8446E-05 0.27797 0.00012974 466.73788377496 471.741739398491 32.894 0.68786 32.894 32.44 33.128 0 129 34 7 0 0 0 0.0022675 2 13817 101.33 29.612 1 2.883 2.5155 0 59836000 15063000 44773000 7356 1569 2793 2866 11493;11494 11494 EELSEEGYLAK 11 1 0 Unmodified _EELSEEGYLAK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;K7EJL0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3073 2 634.306258 1266.59796 NaN NaN NaN 0.72624 0.00046066 NaN NaN NaN NaN 53.708 0.31226 53.708 53.468 53.78 -3.8147E-06 0 0 0 2.7964E-05 1 30697 102.07 71.901 1 NaN NaN 0 11592000 11592000 0 7357 222 2794 2867 11495 11495 EELSEEGYLAK 11 1 0 Unmodified _EELSEEGYLAK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;K7EJL0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.3073 2 634.306258 1266.59796 NaN NaN NaN 0.45803 0.00029053 NaN NaN NaN NaN 63.839 0.50812 63.839 63.619 64.127 0 0 0 0 0.0024044 1 32814 74.92 54.591 1 NaN NaN 0 2264700 2264700 0 7358 222 2794 2867 11496 11496 EELSNVLAAMR 11 0 1 Oxidation (M) _EELSNVLAAM(ox)R_ EELSNVLAAM(1)R EELSNVLAAM(74.92)R 0 1 0 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.8206 2 624.81627 1247.61799 72164.98 0.4567 0.00028535 0.29012 0.00018127 0.74682 0.00046662 624.816303547239 629.820473014827 68.706 1.1049 68.706 68.179 69.284 0 496 96 8 0 0 0 0.00023427 3 40037 74.92 60.253 1 1.7672 2.0218 0 128550000 41554000 86993000 7359 2140 2795 2868 11497;11498;11499 11499 1980 EELSNVLAAMR 11 0 1 Oxidation (M) _EELSNVLAAM(ox)R_ EELSNVLAAM(1)R EELSNVLAAM(131.62)R 0 1 0 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.817 2 624.81627 1247.61799 NaN NaN NaN 0.0020474 1.2793E-06 NaN NaN NaN NaN 67.511 0.73262 67.511 67.213 67.946 0 0 0 0 1.8517E-16 1 39915 131.62 115.08 1 NaN NaN 0 83170000 83170000 0 7360 2140 2795 2868 11500 11500 1980 EELSNVLAAMR 11 0 1 Oxidation (M) _EELSNVLAAM(ox)R_ EELSNVLAAM(1)R EELSNVLAAM(83.78)R 0 1 0 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.8167 2 624.81627 1247.61799 75912.48 0.90504 0.00056548 -0.045206 -2.8245E-05 0.85983 0.00053724 624.816091160728 629.820547153458 112.89 0.49059 112.89 112.68 113.17 0 79 21 5 0 0 0 0.00017954 1 65708 83.783 69.576 1 0.63269 0.54428 0 7604200 4807500 2796700 7361 2140 2795 2868 11501 11501 1980 EELSNVLAAMR 11 0 1 Oxidation (M) _EELSNVLAAM(ox)R_ EELSNVLAAM(1)R EELSNVLAAM(42.19)R 0 1 0 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 629.8208 2 624.81627 1247.61799 76537.45 0.52785 0.00032981 -0.55565 -0.00034718 -0.027806 -1.7373E-05 624.816221777506 629.820381411169 78.819 0.85202 78.819 78.393 79.245 0 237 54 8 0 0 0 0.011409 1 41498 42.19 37.407 1 0.46039 0.38294 0 7395000 4832700 2562300 7362 2140 2795 2868 11502 11502 1980 EELSNVLAAMR 11 0 1 Oxidation (M) _EELSNVLAAM(ox)R_ EELSNVLAAM(1)R EELSNVLAAM(76.46)R 0 1 0 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.8169 2 624.81627 1247.61799 NaN NaN NaN 0.13977 8.7328E-05 NaN NaN NaN NaN 112.76 0.4827 112.76 112.54 113.03 0 0 0 0 0.0006989 1 64670 76.465 55.563 1 NaN NaN 0 2953300 2953300 0 7363 2140 2795 2868 11503 11503 1980 EELSNVLAAMR 11 0 1 Unmodified _EELSNVLAAMR_ 0 0 0 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8228 2 616.818812 1231.62307 NaN NaN NaN -1.2865 -0.00079356 NaN NaN NaN NaN 100.3 0.10876 100.3 100.25 100.35 0 0 0 0 0.0040181 1 61492 66.692 40.587 1 NaN NaN 0 3111200 0 3111200 7364 2140 2795 2869 11504 11504 EELSNVLAAMR 11 0 1 Unmodified _EELSNVLAAMR_ 0 0 0 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8194 2 616.818812 1231.62307 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.941 1 99.941 99.441 100.44 0 0 0 0 1.5475E-05 1 61236 92.062 52.018 1 7365 2140 2795 2869 11505 11505 EELSNVLAAMR 11 0 1 Unmodified _EELSNVLAAMR_ 0 0 0 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8179 2 616.818812 1231.62307 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.178 1 99.178 98.678 99.678 -7.6294E-06 0 0 0 0.00041677 1 62134 76.827 43.986 1 7366 2140 2795 2869 11506 11506 EELSNVLAAMR 11 0 1 Unmodified _EELSNVLAAMR_ 0 0 0 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.8192 2 616.818812 1231.62307 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.79 1 112.79 112.29 113.29 0 0 0 0 0.035604 1 65585 46.462 35.311 1 7367 2140 2795 2869 11507 11507 EELSNVLAAMR 11 0 1 Unmodified _EELSNVLAAMR_ 0 0 0 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.8234 2 616.818812 1231.62307 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.9 1 112.9 112.4 113.4 0 0 0 0 1.2185E-06 1 65672 104.2 75.114 1 7368 2140 2795 2869 11508 11508 EELSNVLAAMR 11 0 1 Unmodified _EELSNVLAAMR_ 0 0 0 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.8231 2 616.818812 1231.62307 76270.14 0.57541 0.00035492 0.048509 2.9921E-05 0.62392 0.00038485 616.818809569607 621.822851948399 112.77 0.5891 112.77 112.53 113.12 0 109 28 5 0 0 0 8.8417E-05 2 64642 97.635 77.848 1 0.7057 0.57009 0 10777000 6682500 4094700 7369 2140 2795 2869 11509;11510 11510 EELSNVLAAMRK 12 1 1 Oxidation (M) _EELSNVLAAM(ox)RK_ EELSNVLAAM(1)RK EELSNVLAAM(44.62)RK 0 1 1 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.5861 3 459.57826 1375.71295 88216.88 0.10313 4.7398E-05 -1.1501 -0.00052854 -1.0469 -0.00048114 459.577248963384 465.58540188685 47.944 0.29949 47.944 47.74 48.039 -3.8147E-06 47 20 4 0 0 0 0.0044483 1 26719 44.616 41.124 1 1.7511 1.9835 0 16536000 5918800 10617000 7370 2140 2796 2870 11511 11511 1980 EELTLEGIR 9 0 1 Unmodified _EELTLEGIR_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;B4DNH2;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2908 2 530.287671 1058.56079 82313.34 0.27738 0.00014709 -0.44709 -0.00023709 -0.16971 -8.9994E-05 530.28741052247 535.291469697726 77.504 0.99922 77.504 77.002 78.001 0 391 80 6 0 0 0 0.0016671 2 45587 82.426 29.64 1 1.9937 2.2195 0 79378000 26794000 52584000 7371 770 2797 2871 11512;11513 11513 EELTLEGIR 9 0 1 Unmodified _EELTLEGIR_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;B4DNH2;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.2877 2 530.287671 1058.56079 82193.99 0.094917 5.0333E-05 -0.32383 -0.00017172 -0.22891 -0.00012139 530.287567349511 535.291255942006 76.427 1.091 76.427 75.78 76.871 0 322 91 5 0 0 0 0.0010522 3 45955 90.657 26.929 1 2.1052 2.4023 0 93062000 29598000 63464000 7372 770 2797 2871 11514;11515;11516 11515 EELTLEGIR 9 0 1 Unmodified _EELTLEGIR_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;B4DNH2;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.292 2 530.287671 1058.56079 83293.88 0.34864 0.00018488 -0.32066 -0.00017004 0.027986 1.484E-05 530.287580327275 535.291088897764 88.411 1.3042 88.411 87.631 88.935 0 205 77 5 0 0 0 0.019545 2 47837 51.066 20.9 1 1.3988 1.1648 0 6256500 2377100 3879400 7373 770 2797 2871 11517;11518 11518 EELVLELQTAK 11 1 0 Unmodified _EELVLELQTAK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.858 2 636.855918 1271.69728 77382.18 0.65156 0.00041495 0.28319 0.00018035 0.93476 0.00059531 636.855902234829 640.863290453465 89.024 0.25938 89.024 88.882 89.142 7.6294E-06 86 18 7 0 0 0 3.708E-13 2 53678 148.94 123.95 1 0.83354 0.93852 0 73592000 40247000 33344000 7374 1803 2798 2872 11519;11520 11519 EELVLELQTAK 11 1 0 Unmodified _EELVLELQTAK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.8632 2 636.855918 1271.69728 NaN NaN NaN 1.1675 0.00074354 NaN NaN NaN NaN 87.906 0.33281 87.906 87.752 88.085 -7.6294E-06 0 0 0 0.0022775 1 54255 76.143 46.67 1 NaN NaN 0 32893000 0 32893000 7375 1803 2798 2872 11521 11521 EELYLQR 7 0 1 Unmodified _EELYLQR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.7509 2 475.750724 949.486896 87062.2 0.40762 0.00019392 0.36573 0.000174 0.77335 0.00036792 475.75075105246 480.75493355417 44.726 1.0231 44.726 44.279 45.302 0 434 90 6 0 0 0 0.026941 1 23882 83.287 49.549 1 0.80544 0.91924 0 121810000 67226000 54589000 7376 2070 2799 2873 11522 11522 EELYLQR 7 0 1 Unmodified _EELYLQR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.7509 2 475.750724 949.486896 87266.48 0.65657 0.00031236 0.2071 9.8527E-05 0.86367 0.00041089 475.750742719502 480.754773541605 44.061 0.99135 44.061 43.575 44.566 0 439 84 9 0 0 0 0.0085438 2 23851 127.66 84.788 1 0.84072 0.96204 0 162400000 90084000 72318000 7377 2070 2799 2873 11523;11524 11524 EELYLQR 7 0 1 Unmodified _EELYLQR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.7506 2 475.750724 949.486896 86901.74 0.096469 4.5895E-05 0.41357 0.00019676 0.51004 0.00024265 475.751031407948 480.754762354084 51.784 1.2771 51.784 51.039 52.316 0 375 90 7 0 0 0 0.028425 1 24881 71.949 41.337 1 1.4275 1.1648 0 12854000 5213400 7640500 7378 2070 2799 2873 11525 11525 EELYQNLTR 9 0 1 Unmodified _EELYQNLTR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.2999 2 583.296027 1164.5775 79776.15 0.68975 0.00040233 -0.51043 -0.00029773 0.17933 0.0001046 583.295911789019 588.299729392629 55.501 0.37431 55.501 55.39 55.764 0 95 29 4 0 0 0 0.00031179 1 31266 102.51 79.085 1 1.2586 1.3213 0 11131000 3855500 7275800 7379 523 2800 2874 11526 11526 EELYQNLTR 9 0 1 Unmodified _EELYQNLTR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.2997 2 583.296027 1164.5775 80160.27 0.894 0.00052147 -0.26796 -0.0001563 0.62604 0.00036517 583.295949220198 588.30006128714 54.585 0.44109 54.585 54.403 54.844 3.8147E-06 114 36 4 0 0 0 9.6685E-06 1 31177 127.56 93.476 1 1.3599 1.3684 0 19355000 8154600 11201000 7380 523 2800 2874 11527 11527 EENAEQQALAAK 12 1 0 Unmodified _EENAEQQALAAK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3297 2 651.320231 1300.62591 75308.39 0.80016 0.00052116 0.37597 0.00024488 1.1761 0.00076604 651.32041739134 655.327268625314 28.293 0.28445 28.293 28.157 28.441 1.9073E-06 71 19 6 0 0 0 7.7105E-23 2 13285 157.96 147.75 1 0.87257 0.90587 0 14829000 7627200 7201900 7381 803 2801 2875 11528;11529 11528 EENAEQQALAAK 12 1 0 Unmodified _EENAEQQALAAK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.3285 2 651.320231 1300.62591 75233.62 0.4035 0.0002628 0.42078 0.00027406 0.82427 0.00053687 651.320269330583 655.327449517544 27.706 0.24429 27.706 27.591 27.835 0 54 12 6 0 0 0 7.7105E-23 2 12950 157.96 147.72 1 0.74848 0.75281 0 27194000 14387000 12808000 7382 803 2801 2875 11530;11531 11530 EENAEQQALAAK 12 1 0 Unmodified _EENAEQQALAAK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.3279 2 651.320231 1300.62591 73512.32 0.48021 0.00031277 -0.26157 -0.00017036 0.21864 0.0001424 651.320100703368 655.327105778746 32.505 0.3981 32.505 32.313 32.711 -3.8147E-06 82 18 8 0 0 0 1.1746E-17 2 14008 138.08 127.85 1 1.1978 0.95715 0 9049500 3802100 5247400 7383 803 2801 2875 11532;11533 11532 EENAEQQALAAK 12 1 0 Unmodified _EENAEQQALAAK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.3272 2 651.320231 1300.62591 73113.9 0.57232 0.00037276 -0.10209 -6.6493E-05 0.47023 0.00030627 651.320070447601 655.32698957786 32.703 0.27955 32.703 32.541 32.821 0 49 12 5 0 0 0 4.9441E-13 2 13648 134.68 124.99 1 1.098 0.89457 0 7483400 3723700 3759700 7384 803 2801 2875 11534;11535 11535 EENAGAEAAQSLSHEQPQDSSEAGAAALPR 30 0 1 Unmodified _EENAGAEAAQSLSHEQPQDSSEAGAAALPR_ 0 0 0 Q9UK61 Q9UK61 Q9UK61 FAM208A Protein FAM208A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1011.8021 3 1007.79753 3020.37076 63106.38 0.43757 0.00044098 0.14971 0.00015088 0.58728 0.00059186 1008.4665555356 1011.46828190879 69.264 0.39588 69.264 69.101 69.497 0 82 32 6 0 0 0 3.761E-07 4 41252 40.819 40.819 1 1.0947 1.0802 0 14847000 6229700 8617700 7385 2105 2802 2876 11536;11537;11538;11539 11539 EENFFGPK 8 1 0 Unmodified _EENFFGPK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.237 2 484.229625 966.444697 87308.91 0.15776 7.6391E-05 0.53027 0.00025677 0.68803 0.00033316 484.229882277335 488.236820240429 52.04 0.612 52.04 51.784 52.396 0 149 47 5 0 0 0 0.016899 1 28840 60.799 49.982 1 2.87 2.9603 0 28990000 7467300 21522000 7386 2087 2803 2877 11540 11540 EENFFGPK 8 1 0 Unmodified _EENFFGPK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.2365 2 484.229625 966.444697 88089.84 0.39488 0.00019121 -0.16082 -7.7873E-05 0.23406 0.00011334 484.229651013276 488.236430654391 50.684 0.54273 50.684 50.455 50.997 0 114 44 4 0 0 0 0.019676 1 28728 58.981 49.741 1 2.5289 2.5431 0 27462000 10432000 17030000 7387 2087 2803 2877 11541 11541 EENSHTEQPPLMK 13 1 0 Oxidation (M) _EENSHTEQPPLM(ox)K_ EENSHTEQPPLM(1)K EENSHTEQPPLM(57.17)K 0 1 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.3636 2 778.356487 1554.69842 72431.07 0.032152 2.5025E-05 0.33529 0.00026097 0.36744 0.000286 778.356177795043 782.363151945131 19.665 0.27387 19.665 19.568 19.842 0 24 12 4 0 0 0 0.00077461 1 6063 57.174 47.741 1 0.47965 0.47491 0 5879100 3988000 1891200 7388 1680 2804 2878 11542 11542 1489 EENSTEEQALEDQNAK 16 1 0 Unmodified _EENSTEEQALEDQNAK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.9023 2 917.900499 1833.78644 66615.05 0.37329 0.00034264 -0.0047656 -4.3743E-06 0.36852 0.00033827 917.900894403899 921.907476178062 30.013 0.77429 30.013 29.664 30.438 -1.9073E-06 212 67 5 0 0 0 1.2527E-33 1 14500 153.34 150.7 1 1.0782 1.0562 0 21757000 8636200 13121000 7389 2063 2805 2879 11543 11543 EENSTEEQALEDQNAK 16 1 0 Unmodified _EENSTEEQALEDQNAK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 921.9081 2 917.900499 1833.78644 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.71 1 29.71 29.21 30.21 1.9073E-06 0 0 0 1.4516E-07 1 14439 102.62 88.715 1 7390 2063 2805 2879 11544 11544 EENSTEEQALEDQNAK 16 1 0 Unmodified _EENSTEEQALEDQNAK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.3986 2 917.900499 1833.78644 64197.11 0.77867 0.00071474 8.0473E-05 7.3866E-08 0.77875 0.00071481 917.900988132454 921.90760471658 29.588 0.71488 29.588 29.171 29.886 0 217 54 6 0 0 0 1.1009E-24 2 14160 142.97 137.13 1 0.95952 0.97969 0 31405000 14956000 16448000 7391 2063 2805 2879 11545;11546 11546 EENSTEEQALEDQNAK 16 1 0 Unmodified _EENSTEEQALEDQNAK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 917.9022 2 917.900499 1833.78644 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.29 1 29.29 28.79 29.79 -1.9073E-06 0 0 0 6.6848E-12 1 14122 111.63 101.26 1 7392 2063 2805 2879 11547 11547 EENSTEEQALEDQNAK 16 1 0 Unmodified _EENSTEEQALEDQNAK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 921.9067 2 917.900499 1833.78644 63262.32 0.38914 0.00035719 -0.069343 -6.365E-05 0.3198 0.00029354 917.900413952497 921.907609565996 35.265 0.99757 35.265 34.854 35.852 0 484 86 8 0 0 0 0.0011365 1 15551 46.481 46.481 1 1.291 1.0329 0 20637000 9663000 10974000 7393 2063 2805 2879 11548 11548 EENSTEEQALEDQNAK 16 1 0 Unmodified _EENSTEEQALEDQNAK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 922.4098 2 917.900499 1833.78644 63703.66 0.47666 0.00043753 -0.020136 -1.8483E-05 0.45652 0.00041904 917.900462243255 921.907565486759 35.762 0.88198 35.762 35.212 36.094 0 531 75 10 0 0 0 0.056079 1 15627 22.493 22.493 1 1.3222 1.0626 0 16996000 7307900 9687900 7394 2063 2805 2879 11549 11549 EENVDIEGLDPAPSVSALTPHAGTGPVNPPAR 32 0 1 Unmodified _EENVDIEGLDPAPSVSALTPHAGTGPVNPPAR_ 0 0 0 Q15906 Q15906 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1073.5424 3 1069.86874 3206.58438 59464.31 0.29819 0.00031902 0.89766 0.00096038 1.1958 0.0012794 1070.53759165323 1073.54306931273 107.03 0.25694 107.03 106.85 107.1 0 61 17 5 0 0 0 0.027572 1 68190 12.278 12.278 1 0.84739 0.84433 0 16523000 9982800 6539800 7395 1767 2806 2880 11550 11550 EENVDIEGLDPAPSVSALTPHAGTGPVNPPAR 32 0 1 Unmodified _EENVDIEGLDPAPSVSALTPHAGTGPVNPPAR_ 0 0 0 Q15906 Q15906 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1070.2034 3 1069.86874 3206.58438 59497.86 0.33843 0.00036207 0.11037 0.00011808 0.44879 0.00048015 1070.5377702733 1073.87400446349 118.39 0.34823 118.39 118.19 118.54 0 77 14 8 0 0 0 0.041696 2 69882 9.6067 9.6067 1 1.1007 0.92577 0 4451700 2100400 2351400 7396 1767 2806 2880 11551;11552 11552 EENVDIEGLDPAPSVSALTPHAGTGPVNPPAR 32 0 1 Unmodified _EENVDIEGLDPAPSVSALTPHAGTGPVNPPAR_ 0 0 0 Q15906 Q15906 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1073.2052 3 1069.86874 3206.58438 59350.54 0.084715 9.0634E-05 0.13102 0.00014018 0.21574 0.00023081 1069.86778397836 1073.53920778037 118.14 0.35297 118.14 117.98 118.33 0 72 15 8 0 0 0 0.022224 3 68822 14.636 14.636 1 0.88689 0.74547 0 4823700 2311000 2512800 7397 1767 2806 2880 11553;11554;11555 11554 EEPAIAPIEHVLSGWK 16 1 0 Unmodified _EEPAIAPIEHVLSGWK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.9908 3 592.649071 1774.92539 NaN NaN NaN 0.093077 5.5162E-05 NaN NaN NaN NaN 115.45 0.56259 115.45 115.15 115.72 0 0 0 0 0.0039679 2 73390 44.567 25.738 1 NaN NaN 0 6018400 0 6018400 7398 2008 2807 2881 11556;11557 11557 EEPAIAPIEHVLSGWK 16 1 0 Unmodified _EEPAIAPIEHVLSGWK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.9837 3 592.649071 1774.92539 79286.77 0.69426 0.00041145 -0.28691 -0.00017004 0.40735 0.00024141 592.648934058744 595.320367972119 114.65 0.49746 114.65 114.41 114.91 7.6294E-06 153 30 6 0 0 0 4.6641E-05 2 74583 66.673 60.663 1 0.85719 0.85928 0 15828000 8547700 7280300 7399 2008 2807 2881 11558;11559 11559 EEPAIAPIEHVLSGWK 16 1 0 Unmodified _EEPAIAPIEHVLSGWK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.9833 3 592.649071 1774.92539 77838.23 0.88569 0.0005249 0.4282 0.00025377 1.3139 0.00077867 592.648977774708 595.320401316265 126.28 0.79161 126.28 125.91 126.7 7.6294E-06 143 30 10 0 0 0 4.7289E-05 2 75917 48.314 44.143 1 1.4427 1.1203 0 12711000 4955500 7755600 7400 2008 2807 2881 11560;11561 11561 EEPAIAPIEHVLSGWK 16 1 0 Unmodified _EEPAIAPIEHVLSGWK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.9839 3 592.649071 1774.92539 78534.84 0.66651 0.000395 0.075596 4.4802E-05 0.7421 0.00043981 592.649141566524 595.320443798646 126.11 0.65984 126.11 125.82 126.48 0 172 29 9 0 0 0 0.0010294 2 74821 36.112 36.112 1 1.4142 1.1647 0 10545000 3817000 6728300 7401 2008 2807 2881 11562;11563 11563 EEPAIAPIEHVLSGWK 16 1 0 Unmodified _EEPAIAPIEHVLSGWK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 892.4802 2 888.469969 1774.92539 64713.07 0.33009 0.00029327 0.26841 0.00023847 0.5985 0.00053175 888.972265605266 892.478438940065 126.1 0.62884 126.1 125.74 126.37 0 135 28 8 0 0 0 0.010684 1 74834 33.685 33.685 1 1.5772 1.2904 0 8412400 3341200 5071200 7402 2008 2807 2881 11564 11564 EEPAPEEEEPLLLQRPER 18 0 2 Unmodified _EEPAPEEEEPLLLQRPER_ 0 0 1 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.3654 3 721.030569 2160.06988 70575.09 0.47388 0.00034168 0.1571 0.00011328 0.63098 0.00045496 721.365030434241 727.702876039727 77.382 0.83447 77.382 77.002 77.837 -7.6294E-06 502 68 10 0 0 0 4.4121E-06 2 45569 67.646 63.742 1 0.98022 1.0684 0 109790000 49072000 60713000 7403 2008 2808 2882 11565;11566 11566 EEPAPEEEEPLLLQRPER 18 0 2 Unmodified _EEPAPEEEEPLLLQRPER_ 0 0 1 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.0316 3 721.030569 2160.06988 70617.65 0.34727 0.0002504 0.30169 0.00021753 0.64896 0.00046792 721.365091624176 727.702990586215 76.265 0.81778 76.265 75.905 76.723 7.6294E-06 474 67 10 0 0 0 5.6339E-06 2 45872 56.817 56.817 1 0.96431 1.1345 0 139870000 71803000 68064000 7404 2008 2808 2882 11567;11568 11568 EEPAPEEEEPLLLQRPER 18 0 2 Unmodified _EEPAPEEEEPLLLQRPER_ 0 0 1 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.3658 3 721.030569 2160.06988 70681.43 0.86243 0.00062184 -0.16414 -0.00011835 0.69829 0.00050349 721.364577965068 728.036919075615 88.361 0.82049 88.361 88.008 88.829 0 374 50 11 0 0 0 1.0784E-05 1 48674 53.278 51.35 1 1.426 1.1688 0 31677000 13429000 18248000 7405 2008 2808 2882 11569 11569 EEPAPEEEEPLLLQRPER 18 0 2 Unmodified _EEPAPEEEEPLLLQRPER_ 0 0 1 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.3658 3 721.030569 2160.06988 70611.58 0.57298 0.00041313 0.3862 0.00027846 0.95918 0.0006916 721.364992672472 728.037242848989 88.3 0.91389 88.3 88.021 88.935 0 333 53 12 0 0 0 1.9333E-06 2 47819 62.203 62.203 1 1.3029 1.2083 0 23618000 9259200 14359000 7406 2008 2808 2882 11570;11571 11570 EEPFFPPPEEFVFIHAVPVEER 22 0 1 Unmodified _EEPFFPPPEEFVFIHAVPVEER_ 0 0 0 H3BQZ7;Q1KMD3 H3BQZ7 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 884.7766 3 881.103957 2640.29004 65681.5 0.99458 0.00087633 0.006616 5.8294E-06 1.0012 0.00088216 881.772089939792 884.774102502191 130.1 0.91179 130.1 129.69 130.6 0 238 53 8 0 0 0 1.6901E-05 2 84915 40.622 40.622 1 0.77721 0.78527 0 7719900 4427200 3292700 7407 1303 2809 2883 11572;11573 11573 EEPFFPPPEEFVFIHAVPVEER 22 0 1 Unmodified _EEPFFPPPEEFVFIHAVPVEER_ 0 0 0 H3BQZ7;Q1KMD3 H3BQZ7 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 884.7762 3 881.103957 2640.29004 65286.63 0.63155 0.00055646 0.36611 0.00032258 0.99766 0.00087904 881.438641349217 884.774482796144 129.51 0.75604 129.51 129.22 129.98 0 230 46 8 0 0 0 2.6631E-08 2 86506 62.19 62.19 1 0.81669 0.80221 0 13646000 8156200 5489600 7408 1303 2809 2883 11574;11575 11575 EEPGSDSGTTAVVALIR 17 0 1 Unmodified _EEPGSDSGTTAVVALIR_ 0 0 0 B4DDC8;B3KXL8;Q6IAU5;B2R665;O15355;Q96IN7;Q59GB2 B4DDC8 B4DDC8 PPM1G Protein phosphatase 1G ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 856.9417 2 851.436323 1700.85809 NaN NaN NaN -0.42379 -0.00036083 NaN NaN NaN NaN 99.354 0.45531 99.354 99.093 99.548 0 0 0 0 0.0013943 1 60757 58.674 45.583 1 NaN NaN 0 5469600 0 5469600 7409 839 2810 2884 11576 11576 EEPGSDSGTTAVVALIR 17 0 1 Unmodified _EEPGSDSGTTAVVALIR_ 0 0 0 B4DDC8;B3KXL8;Q6IAU5;B2R665;O15355;Q96IN7;Q59GB2 B4DDC8 B4DDC8 PPM1G Protein phosphatase 1G ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.4391 2 851.436323 1700.85809 NaN NaN NaN 0.062107 5.288E-05 NaN NaN NaN NaN 98.61 0.41978 98.61 98.392 98.811 0 0 0 0 1.0528E-09 1 61665 103.88 83.01 1 NaN NaN 0 8014600 0 8014600 7410 839 2810 2884 11577 11577 EEPLAVSK 8 1 0 Unmodified _EEPLAVSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.747 2 436.739825 871.465098 NaN NaN NaN 0.7969 0.00034804 NaN NaN NaN NaN 29.312 0.44366 29.312 29.086 29.53 0 0 0 0 0.024775 1 14115 62.464 39.842 1 NaN NaN 0 149320000 0 149320000 7411 1569 2811 2885 11578 11578 EEPLAVSK 8 1 0 Unmodified _EEPLAVSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.7476 2 436.739825 871.465098 NaN NaN NaN 0.75239 0.0003286 NaN NaN NaN NaN 28.647 0.29596 28.647 28.502 28.797 0 0 0 0 0.052149 1 13694 49.097 29.25 1 NaN NaN 0 49882000 0 49882000 7412 1569 2811 2885 11579 11579 EEPLSEEEPCTSTAIASPEK 20 1 0 Unmodified _EEPLSEEEPCTSTAIASPEK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1107.0063 2 1102.49919 2202.98382 57190.9 -0.013964 -1.5396E-05 0.2653 0.00029249 0.25133 0.0002771 1103.00108103763 1107.00775641141 70.061 0.48923 70.061 69.828 70.317 0 220 45 7 0 0 0 1.6723E-23 3 40640 132.24 102.69 1 1.9147 1.8761 0 21403000 9338800 12065000 7413 2129 2812 2886 11580;11581;11582 11580 EEPLSEEEPCTSTAIASPEK 20 1 0 Unmodified _EEPLSEEEPCTSTAIASPEK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1106.5039 2 1102.49919 2202.98382 56849.36 0.073357 8.0876E-05 0.21558 0.00023767 0.28893 0.00031855 1102.49987634281 1107.00781758342 69.071 0.45685 69.071 68.871 69.328 0 208 38 7 0 0 0 9.9166E-65 3 40978 177.63 149.27 1 1.8782 1.9064 0 29788000 9855100 19933000 7414 2129 2812 2886 11583;11584;11585 11583 EEPVEEAEEEAPEASTAPK 19 1 0 Unmodified _EEPVEEAEEEAPEASTAPK_ 0 0 0 Q9ULJ3 Q9ULJ3 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1021.458 2 1021.45785 2040.90114 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.09 1 60.09 59.59 60.59 0 0 0 0 1.5264E-07 1 34277 93.494 81.328 1 7415 2109 2813 2887 11586 11586 EEPVEEAEEEAPEASTAPK 19 1 0 Unmodified _EEPVEEAEEEAPEASTAPK_ 0 0 0 Q9ULJ3 Q9ULJ3 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1025.9645 2 1021.45785 2040.90114 61112.02 -0.090888 -9.2838E-05 0.56452 0.00057663 0.47363 0.00048379 1021.95956116773 1025.46561703663 70.847 0.37447 70.847 70.665 71.039 0 126 30 6 0 0 0 0.0071425 1 36417 29.491 29.491 1 1.0091 0.78908 0 3708800 1910000 1798800 7416 2109 2813 2887 11587 11587 EEPVTADVINPMALR 15 0 1 Oxidation (M) _EEPVTADVINPM(ox)ALR_ EEPVTADVINPM(1)ALR EEPVTADVINPM(55.4)ALR 0 1 0 O43290 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.4265 2 835.924537 1669.83452 NaN NaN NaN -0.18275 -0.00015276 NaN NaN NaN NaN 93.712 0.29593 93.712 93.558 93.854 0 0 0 0 0.0016365 1 58126 55.401 40.721 1 NaN NaN 0 9015400 9015400 0 7417 1384 2814 2888 11588 11588 1055 EEQMDGTVTLK 11 1 0 Oxidation (M) _EEQM(ox)DGTVTLK_ EEQM(1)DGTVTLK EEQM(88.5)DGTVTLK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.7999 2 633.797743 1265.58093 76313.32 0.48066 0.00030464 -0.00036266 -2.2985E-07 0.4803 0.00030441 633.797785487486 637.8045246305 29.136 0.30235 29.136 28.96 29.262 1.9073E-06 78 16 7 0 0 0 0.0001451 1 14026 88.495 71.956 1 0.94595 1.0693 0 83901000 40524000 43377000 7418 1770 2815 2889 11589 11589 1634 EEQMDGTVTLK 11 1 0 Oxidation (M) _EEQM(ox)DGTVTLK_ EEQM(1)DGTVTLK EEQM(117.31)DGTVTLK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.798 2 633.797743 1265.58093 75019.13 0.76304 0.00048362 0.19503 0.00012361 0.95807 0.00060722 633.797716254206 637.80489076929 28.443 0.36884 28.443 28.235 28.604 0 134 27 7 0 0 0 2.4629E-08 2 13569 117.31 103.78 1 0.96217 1.0759 0 86533000 42968000 43564000 7419 1770 2815 2889 11590;11591 11591 1634 EEQMDGTVTLK 11 1 0 Oxidation (M) _EEQM(ox)DGTVTLK_ EEQM(1)DGTVTLK EEQM(51.93)DGTVTLK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.7982 2 633.797743 1265.58093 NaN NaN NaN 0.39545 0.00025064 NaN NaN NaN NaN 32.789 0.40136 32.789 32.573 32.974 0 0 0 0 0.0075046 1 14230 51.927 39.701 1 NaN NaN 0 5647600 5647600 0 7420 1770 2815 2889 11592 11592 1634 EEQMDGTVTLK 11 1 0 Oxidation (M) _EEQM(ox)DGTVTLK_ EEQM(1)DGTVTLK EEQM(63.28)DGTVTLK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.8049 2 633.797743 1265.58093 NaN NaN NaN 1.8273 0.0011581 NaN NaN NaN NaN 32.878 0.39825 32.878 32.655 33.054 0 0 0 0 0.0020908 1 13773 63.283 45.771 1 NaN NaN 0 6448100 0 6448100 7421 1770 2815 2889 11593 11593 1634 EEQMDGTVTLK 11 1 0 Unmodified _EEQMDGTVTLK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.8077 2 625.800285 1249.58602 76711.53 0.62773 0.00039284 -0.18073 -0.0001131 0.44701 0.00027974 625.799793005335 629.807385740365 54.288 0.57423 54.288 54.015 54.589 -3.8147E-06 182 44 6 0 0 0 0.0012874 2 27002 68.657 61.762 1 1.5201 1.1891 0 3844400 1620500 2223900 7422 1770 2815 2890 11594;11595 11594 EEQMDGTVTLK 11 1 0 Unmodified _EEQMDGTVTLK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 629.8077 2 625.800285 1249.58602 78181.54 0.46008 0.00028792 0.2282 0.00014281 0.68828 0.00043073 625.800428947832 629.807442421862 54.784 0.62105 54.784 54.442 55.063 -3.8147E-06 227 46 7 0 0 0 0.0016272 2 26692 66.056 54.566 1 1.5164 1.1975 0 3921900 1489400 2432600 7423 1770 2815 2890 11596;11597 11596 EEQVQGPVELLSIPEDAPEK 20 1 0 Unmodified _EEQVQGPVELLSIPEDAPEK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1108.0674 2 1104.05753 2206.10051 59421.29 0.37214 0.00041086 0.3278 0.00036191 0.69994 0.00077277 1104.55989646012 1108.5655723366 113.79 0.5818 113.79 113.48 114.07 -7.6294E-06 197 41 8 0 0 0 6.7403E-07 2 72093 81.311 81.311 1 0.71306 0.72277 0 18207000 10946000 7261600 7424 2033 2816 2891 11598;11599 11598 EESAATQALK 10 1 0 Unmodified _EESAATQALK_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.2767 2 524.269478 1046.5244 83290.88 0.24553 0.00012872 0.75978 0.00039833 1.0053 0.00052705 524.772288620794 528.276499179803 23.764 0.37377 23.764 23.622 23.995 0 57 18 5 0 0 0 0.0026988 1 9598 67.897 53.901 1 0.94047 0.97367 0 11177000 5144900 6032200 7425 1566 2817 2892 11600 11600 EESDDEAAVEEEEEEK 16 1 0 Unmodified _EESDDEAAVEEEEEEK_ 0 0 0 Q5CAQ5;V9HWP2;P14625;B4DU71;Q59FC6 Q5CAQ5 Q5CAQ5 TRA1;HEL-S-125m;HSP90B1 Endoplasmin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 937.8748 2 933.865987 1865.71742 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.729 1 33.729 33.229 34.229 -3.8147E-06 0 0 0 0.00088609 1 16966 57.175 51.998 1 7426 1482 2818 2893 11601 11601 EESGKPGAHVTVK 13 2 0 Unmodified _EESGKPGAHVTVK_ 0 0 1 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.8547 2 669.854241 1337.69393 73660.05 0.59492 0.00039851 0.068246 4.5715E-05 0.66317 0.00044423 669.85430839831 677.868439808015 15.787 0.41559 15.787 15.668 16.083 -9.5367E-07 119 23 8 0 0 0 3.1847E-08 2 3304 119.27 95.052 1 2.3758 2.8053 0 37064000 11340000 25723000 7427 1508 2819 2894 11602;11603 11603 EESGKPGAHVTVK 13 2 0 Unmodified _EESGKPGAHVTVK_ 0 0 1 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.9059 3 446.905253 1337.69393 89474.91 0.084524 3.7774E-05 -0.0083316 -3.7234E-06 0.076193 3.4051E-05 446.905689896949 452.248091802533 15.794 0.75122 15.794 15.654 16.406 0 202 42 10 0 0 0 0.00012365 1 3346 49.483 49.483 1 2.14 2.5258 0 82224000 26598000 55625000 7428 1508 2819 2894 11604 11604 EESGKPGAHVTVK 13 2 0 Unmodified _EESGKPGAHVTVK_ 0 0 1 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8689 2 669.854241 1337.69393 73797.7 0.19995 0.00013394 0.3364 0.00022534 0.53635 0.00035928 669.85471435328 677.86861691767 15.263 0.70352 15.263 15.057 15.76 0 79 38 7 0 0 0 5.7492E-30 3 2942 182.71 154.51 1 1.0858 1.2567 0 45152000 12993000 32159000 7429 1508 2819 2894 11605;11606;11607 11606 EESGKPGAHVTVK 13 2 0 Unmodified _EESGKPGAHVTVK_ 0 0 1 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.9053 3 446.905253 1337.69393 88247.81 -0.28044 -0.00012533 -0.051407 -2.2974E-05 -0.33185 -0.0001483 446.905299579727 452.248039371272 15.271 0.94709 15.271 15.148 16.095 -9.5367E-07 204 65 10 0 0 0 5.9603E-05 2 2943 62.162 62.162 1 2.2817 2.6516 0 126680000 37010000 89672000 7430 1508 2819 2894 11608;11609 11609 EESGKPGAHVTVK 13 2 0 Unmodified _EESGKPGAHVTVK_ 0 0 1 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 452.248 3 446.905253 1337.69393 88604.45 -0.084663 -3.7837E-05 -0.10965 -4.9003E-05 -0.19431 -8.684E-05 446.905284655091 452.247970360267 16.416 0.59071 16.416 16.173 16.763 0 156 38 10 0 0 0 0.0043677 1 3183 42.785 42.785 1 1.3611 1.162 0 15824000 6579000 9245400 7431 1508 2819 2894 11610 11610 EESGKPGAHVTVK 13 2 0 Unmodified _EESGKPGAHVTVK_ 0 0 1 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 446.9052 3 446.905253 1337.69393 89312.54 -0.32574 -0.00014558 0.27637 0.00012351 -0.049372 -2.2064E-05 446.905373965955 452.248116987219 16.399 0.43809 16.399 16.264 16.702 1.9073E-06 171 32 11 0 0 0 0.0094322 2 2878 32.478 32.478 1 1.326 1.1212 0 12311000 5427000 6883900 7432 1508 2819 2894 11611;11612 11612 EESQIPVDEVFFHR 14 0 1 Unmodified _EESQIPVDEVFFHR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.2865 3 577.94941 1730.8264 79702.94 0.66967 0.00038704 -0.062195 -3.5946E-05 0.60748 0.00035109 577.949446122612 581.285474460953 97.507 0.876 97.507 97.3 98.176 -7.6294E-06 355 72 7 0 0 0 0.00019795 2 59405 50.102 50.102 1 0.98263 1.0424 0 41994000 19590000 22403000 7433 836;1683 2820 2895 11613;11614 11613 EESQIPVDEVFFHR 14 0 1 Unmodified _EESQIPVDEVFFHR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.9493 3 577.94941 1730.8264 79973.76 0.84287 0.00048714 -0.34113 -0.00019716 0.50174 0.00028998 577.949320796648 581.619288004332 96.695 0.79996 96.695 96.392 97.191 0 368 65 8 0 0 0 2.9377E-05 2 60228 66.215 62.374 1 0.98772 1.1413 0 69669000 31033000 38636000 7434 836;1683 2820 2895 11615;11616 11616 EESQIPVDEVFFHR 14 0 1 Unmodified _EESQIPVDEVFFHR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.9496 3 577.94941 1730.8264 79161.37 0.62481 0.00036111 0.33135 0.0001915 0.95616 0.00055261 578.283726905835 581.285767101553 109.94 0.63888 109.94 109.66 110.3 0 203 33 10 0 0 0 0.001627 2 63343 28.532 26.435 1 1.1106 0.90574 0 14959000 7023400 7935500 7435 836;1683 2820 2895 11617;11618 11618 EESQIPVDEVFFHR 14 0 1 Unmodified _EESQIPVDEVFFHR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.2851 3 577.94941 1730.8264 79743.23 0.6299 0.00036405 0.26565 0.00015353 0.89555 0.00051758 577.949456895268 581.285793500039 109.74 0.64153 109.74 109.51 110.15 0 192 32 9 0 0 0 0.0027208 3 62281 30.133 30.133 1 1.219 1.0085 0 14802000 6409900 8391600 7436 836;1683 2820 2895 11619;11620;11621 11619 EESSELEQPFAQDTSSVGPDR 21 0 1 Unmodified _EESSELEQPFAQDTSSVGPDR_ 0 0 0 Q14151;A0PJ47 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1159.5212 2 1154.51422 2307.01388 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.172 1 80.172 79.672 80.672 0 0 0 0 0.036532 1 47633 33.204 28.027 1 7437 1727 2821 2896 11622 11622 EESSELEQPFAQDTSSVGPDRK 22 1 1 Unmodified _EESSELEQPFAQDTSSVGPDRK_ 0 0 1 Q14151;A0PJ47 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.7175 3 812.710224 2435.10884 68313.21 0.32261 0.00026219 0.67145 0.00054569 0.99406 0.00080788 813.044922926453 818.717618471026 67.005 0.37398 67.005 66.819 67.193 0 86 26 5 0 0 0 1.9252E-07 1 38644 50.055 42.251 1 1.3118 1.4035 0 12808000 4212900 8595600 7438 1727 2822 2897 11623 11623 EESTTGNANLLEK 13 1 0 Unmodified _EESTTGNANLLEK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9;A0A0A0MSJ1;F5H8B8;F5H797;F5H692;F5H7D5 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 703.3447 2 703.343903 1404.67325 NaN NaN NaN 0.40455 0.00028454 NaN NaN NaN NaN 45.952 0.47972 45.952 45.77 46.25 0 0 0 0 0.005387 1 22044 57.885 39.574 1 NaN NaN 0 2398500 2398500 0 7439 104 2823 2898 11624 11624 EETFTLSTIK 10 1 0 Unmodified _EETFTLSTIK_ 0 0 0 Q9Y678;B3KW21;Q8WUI6;H0Y8X7 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.8161 2 584.808436 1167.60232 80762.48 0.47016 0.00027496 -0.99011 -0.00057903 -0.51995 -0.00030407 585.307921646886 588.815604110103 78.618 0.52998 78.618 78.316 78.846 -7.6294E-06 197 46 6 0 0 0 0.0015966 1 47670 72.928 59.349 1 1.4121 1.4724 0 34092000 13906000 20186000 7440 2151 2824 2899 11625 11625 EETLNMQGLK 10 1 0 Oxidation (M) _EETLNM(ox)QGLK_ EETLNM(1)QGLK EETLNM(41.65)QGLK 0 1 0 REV__C9JAY6 REV__C9JAY6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.2993 2 589.789721 1177.56489 76867.88 0.5344 0.00031519 1.0679 0.00062987 1.6024 0.00094505 589.790669288998 593.797878987269 23.594 0.71202 23.594 23.246 23.958 0 115 29 6 0 0 0 0.015918 1 9295 41.652 22.395 1 0.63684 0.71195 0 103840000 64120000 39717000 + 7441 2162 2825 2900 11626 11626 2006 EETLVIPSTGIK 12 1 0 Unmodified _EETLVIPSTGIK_ 0 0 0 Q96GA3;B4DTT8 Q96GA3 Q96GA3 LTV1 Protein LTV1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.8644 2 643.863743 1285.71293 80583.31 0.92677 0.00059672 -0.018254 -1.1753E-05 0.90852 0.00058496 643.863474461765 648.372487141788 86.989 0.36703 86.989 86.763 87.13 7.6294E-06 78 25 4 0 0 0 0.00020091 2 52475 78.939 78.939 1 1.1195 1.1282 0 10019000 4727200 5291400 7442 1966 2826 2901 11627;11628 11628 EETPGQRPAVTETHQLAELNEK 22 1 1 Unmodified _EETPGQRPAVTETHQLAELNEK_ 0 0 1 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8;I3L1I8;A0A087X1W1;I3L1C0;Q05BI2;Q05CV9 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.4219 3 826.413741 2476.21939 67703.74 1.0521 0.00086947 0.36732 0.00030356 1.4194 0.001173 826.414212049844 832.755894899453 48.458 0.40972 48.458 48.258 48.667 0 65 27 5 0 0 0 2.8549E-07 1 27051 52.72 48.992 1 1.2607 1.4206 0 14077000 5198500 8878400 7443 619 2827 2902 11629 11629 EETPGQRPAVTETHQLAELNEK 22 1 1 Unmodified _EETPGQRPAVTETHQLAELNEK_ 0 0 1 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8;I3L1I8;A0A087X1W1;I3L1C0;Q05BI2;Q05CV9 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.5678 4 620.062125 2476.21939 75892.41 0.78713 0.00048807 0.18712 0.00011602 0.97425 0.00060409 620.312825202328 624.818827477994 48.429 0.39031 48.429 48.238 48.628 3.8147E-06 120 26 7 0 0 0 1.5976E-07 1 27086 53.033 53.033 1 1.5222 1.7398 0 21522000 5924200 15598000 7444 619 2827 2902 11630 11630 EETVGIFSPLSVK 13 1 0 Unmodified _EETVGIFSPLSVK_ 0 0 0 A0A0D9SFM0;Q149N8;H7C2W2 A0A0D9SFM0 A0A0D9SFM0 SHPRH E3 ubiquitin-protein ligase SHPRH MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3837 2 703.3823 1404.75005 77797.63 1.1406 0.00080229 -0.12657 -8.9027E-05 1.014 0.00071326 703.38240548578 707.389095192197 108.69 0.35966 108.69 108.52 108.88 7.6294E-06 66 23 4 0 0 0 0.012922 1 67930 38.875 21.849 1 0.96713 0.97018 0 7553100 4839000 2714200 7445 527 2828 2903 11631 11631 EETVGIFSPLSVK 13 1 0 Unmodified _EETVGIFSPLSVK_ 0 0 0 A0A0D9SFM0;Q149N8;H7C2W2 A0A0D9SFM0 A0A0D9SFM0 SHPRH E3 ubiquitin-protein ligase SHPRH MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.3901 2 703.3823 1404.75005 76931.48 0.74228 0.00052211 0.03168 2.2283E-05 0.77396 0.00054439 703.38237846087 707.890501643116 108.03 0.36523 108.03 107.9 108.27 0 81 26 4 0 0 0 0.00032476 1 69181 64.439 54.13 1 1.0257 1.0198 0 5767600 2351700 3415900 7446 527 2828 2903 11632 11632 EETVLATVQALQTASHLSQQADLR 24 0 1 Unmodified _EETVLATVQALQTASHLSQQADLR_ 0 0 0 B2RE46;P04844 B2RE46 B2RE46 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 870.7927 3 870.455829 2608.34566 65215.14 0.55308 0.00048143 0.77635 0.00067577 1.3294 0.0011572 870.790702809001 873.793101389714 129.7 0.36406 129.7 129.58 129.94 0 69 15 7 0 0 0 0.035713 1 78519 13.248 13.248 1 0.55579 0.46564 0 4022900 2448400 1574500 7447 894 2829 2904 11633 11633 EETVNDPEEAGHR 13 0 1 Unmodified _EETVNDPEEAGHR_ 0 0 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.2231 3 494.886698 1481.63826 85870.88 0.036535 1.8081E-05 0.21123 0.00010454 0.24777 0.00012262 494.887026576934 498.222786929782 17.823 0.3898 17.823 17.683 18.073 0 107 18 10 0 0 0 3.1392E-20 2 4897 149.69 144.89 1 0.72516 0.85842 0 366280000 217870000 148410000 7448 785 2830 2905 11634;11635 11635 EETVNDPEEAGHR 13 0 1 Unmodified _EETVNDPEEAGHR_ 0 0 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8272 2 741.826409 1481.63826 70617.34 0.448 0.00033234 0.38178 0.00028321 0.82978 0.00061555 741.826710107662 746.83082997283 17.793 0.36771 17.793 17.683 18.051 0 90 16 11 0 0 0 7.562E-142 2 4901 302.09 281.22 1 0.8235 0.96141 0 198000000 107670000 90326000 7449 785 2830 2905 11636;11637 11637 EETVNDPEEAGHR 13 0 1 Unmodified _EETVNDPEEAGHR_ 0 0 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.8872 3 494.886698 1481.63826 85492.96 0.12842 6.3554E-05 0.32893 0.00016279 0.45736 0.00022634 494.887123765793 498.222912391982 17.767 0.43781 17.767 17.632 18.07 0 128 22 13 0 0 0 2.9315E-09 2 4614 115.57 110.87 1 0.76351 0.88295 0 264860000 152470000 112380000 7450 785 2830 2905 11638;11639 11638 EETVNDPEEAGHR 13 0 1 Unmodified _EETVNDPEEAGHR_ 0 0 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.827 2 741.826409 1481.63826 70777.58 0.59146 0.00043876 0.37177 0.00027579 0.96323 0.00071455 741.826781847624 746.8308912675 17.77 0.36552 17.77 17.632 17.998 0 98 16 11 0 0 0 1.1893E-104 2 4617 292.33 274.82 1 0.79372 0.9155 0 234480000 131990000 102490000 7451 785 2830 2905 11640;11641 11640 EETVNDPEEAGHR 13 0 1 Unmodified _EETVNDPEEAGHR_ 0 0 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.8268 2 741.826409 1481.63826 70300.22 0.26187 0.00019427 0.46937 0.00034819 0.73125 0.00054246 741.82694019898 746.830819687906 19.237 0.48471 19.237 19.082 19.567 0 169 24 12 0 0 0 4.4019E-06 2 4983 123.8 117.56 1 0.9778 0.84106 0 48940000 24803000 24137000 7452 785 2830 2905 11642;11643 11643 EETVNDPEEAGHR 13 0 1 Unmodified _EETVNDPEEAGHR_ 0 0 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.2233 3 494.886698 1481.63826 85610.62 -0.21464 -0.00010622 0.68514 0.00033906 0.4705 0.00023284 494.887633358101 498.22285381412 19.237 0.48471 19.237 19.082 19.567 1.9073E-06 187 24 12 0 0 0 0.00025243 2 4959 60.345 57.782 1 0.94727 0.81727 0 79648000 41165000 38483000 7453 785 2830 2905 11644;11645 11644 EETVNDPEEAGHR 13 0 1 Unmodified _EETVNDPEEAGHR_ 0 0 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.2227 3 494.886698 1481.63826 84879.91 -0.30272 -0.00014981 0.71713 0.0003549 0.41441 0.00020508 494.887328215836 498.222958402977 19.2 0.28107 19.2 19.068 19.349 0 96 13 11 0 0 0 6.1953E-05 2 4510 70.438 65.637 1 0.91248 0.76848 0 17460000 9376400 8083900 7454 785 2830 2905 11646;11647 11646 EETVNDPEEAGHR 13 0 1 Unmodified _EETVNDPEEAGHR_ 0 0 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 746.8308 2 741.826409 1481.63826 71023.88 0.17862 0.00013251 1.0479 0.00077735 1.2265 0.00090985 741.826945579093 746.830943646983 19.196 0.57516 19.196 18.932 19.508 0 121 32 11 0 0 0 5.7978E-09 1 4511 120.06 113.68 1 0.90478 0.7329 0 10387000 5423600 4963500 7455 785 2830 2905 11648 11648 EEVEDLCR 8 0 1 Unmodified _EEVEDLCR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.235 2 525.232039 1048.44952 NaN NaN NaN -0.97246 -0.00051077 NaN NaN NaN NaN 30.572 0.56413 30.572 30.463 31.027 -1.9073E-06 0 0 0 0.0043751 1 14982 91.041 54.02 1 NaN NaN 0 6622700 0 6622700 7456 1611 2831 2906 11649 11649 EEVEDLCR 8 0 1 Unmodified _EEVEDLCR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.2365 2 525.232039 1048.44952 85276.12 0.31778 0.00016691 0.054641 2.8699E-05 0.37242 0.00019561 525.232101198718 530.236091811568 30.053 0.57136 30.053 29.886 30.458 1.9073E-06 111 46 4 0 0 0 0.0021172 1 14647 102.72 61.217 1 2.3527 2.3569 0 17186000 4354300 12832000 7457 1611 2831 2906 11650 11650 EEVEEVLDSK 10 1 0 Unmodified _EEVEEVLDSK_ 0 0 0 Q7Z5J4;A8MXE8 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.7856 2 588.785158 1175.55576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.313 1 54.313 53.813 54.813 0 0 0 0 6.3276E-05 1 30527 84.213 43.183 1 7458 1879 2832 2907 11651 11651 EEVEEVLDSK 10 1 0 Unmodified _EEVEEVLDSK_ 0 0 0 Q7Z5J4;A8MXE8 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.7737 2 588.785158 1175.55576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.411 1 53.411 52.911 53.911 0 0 0 0 2.0467E-05 1 30549 93.649 64.487 1 7459 1879 2832 2907 11652 11652 EEVGEEAIVELVENGK 16 1 0 Unmodified _EEVGEEAIVELVENGK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 876.946 2 872.435989 1742.85742 64085.94 0.93639 0.00081694 -0.05157 -4.4991E-05 0.88482 0.00077195 872.435244979605 876.944773119258 128.09 0.74858 128.09 127.76 128.5 0 132 30 10 0 0 0 1.763E-08 2 77333 102.66 102.66 1 3.2369 2.5889 0 8822200 2430500 6391700 7460 81 2833 2908 11653;11654 11653 EEVGEEAIVELVENGK 16 1 0 Unmodified _EEVGEEAIVELVENGK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 876.446 2 872.435989 1742.85742 65080.87 0.47461 0.00041407 0.82158 0.00071678 1.2962 0.0011308 872.436393996385 876.444597474624 127.92 0.60126 127.92 127.56 128.16 7.6294E-06 111 24 9 0 0 0 2.198E-08 1 76263 100.19 100.19 1 2.6578 2.1932 0 11204000 3591000 7613000 7461 81 2833 2908 11655 11655 EEVGEEAIVELVENGKK 17 2 0 Unmodified _EEVGEEAIVELVENGKK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.001 3 624.658072 1870.95239 77498.34 0.63606 0.00039732 0.20397 0.00012741 0.84003 0.00052473 624.992817355104 630.001049545648 102.95 0.67031 102.95 102.56 103.23 7.6294E-06 196 57 6 0 0 0 1.899E-05 2 63514 65.225 65.225 1 1.8013 2.1321 0 30036000 10565000 19471000 7462 81 2834 2909 11656;11657 11657 EEVGEEAIVELVENGKK 17 2 0 Unmodified _EEVGEEAIVELVENGKK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 944.5016 2 936.48347 1870.95239 NaN NaN NaN 1.3623 0.0012757 NaN NaN NaN NaN 102.07 0.27814 102.07 101.86 102.14 0 0 0 0 0.030121 1 64313 37.364 23.206 1 NaN NaN 0 5106400 0 5106400 7463 81 2834 2909 11658 11658 EEVGEEAIVELVENGKK 17 2 0 Unmodified _EEVGEEAIVELVENGKK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.001 3 624.658072 1870.95239 NaN NaN NaN 0.23289 0.00014548 NaN NaN NaN NaN 114.81 0.53376 114.81 114.64 115.18 0 0 0 0 0.014986 1 66267 30.083 26.242 1 NaN NaN 0 5075500 0 5075500 7464 81 2834 2909 11659 11659 EEVGINTETSSAER 14 0 1 Unmodified _EEVGINTETSSAER_ 0 0 0 Q14191;Q59F09 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.3566 2 761.354999 1520.69544 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.82 1 35.82 35.32 36.32 3.8147E-06 0 0 0 9.1553E-11 1 18307 113.69 95.867 1 7465 1728 2835 2910 11660 11660 EEVNEWFTK 9 1 0 Unmodified _EEVNEWFTK_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.278 2 591.277303 1180.54005 79554.78 0.63676 0.0003765 0.15711 9.2895E-05 0.79387 0.0004694 591.277495710849 595.284614603886 72.061 1.2724 72.061 71.478 72.75 0 601 100 10 0 0 0 0.00055371 1 42143 97.635 88.713 1 0.76394 0.85195 0 62024000 36882000 25142000 7466 302 2836 2911 11661 11661 EEVPTALVEAHVR 13 0 1 Unmodified _EEVPTALVEAHVR_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q59G16 Q59G16 SMARCC2 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.9283 3 483.928057 1448.76234 88875.28 0.33305 0.00016117 -0.61301 -0.00029665 -0.27996 -0.00013548 483.928006299528 487.263738929419 69.937 0.49532 69.937 69.694 70.189 0 146 40 7 0 0 0 0.00010131 1 41660 64.224 64.224 1 0.64884 0.65452 0 19629000 13249000 6379800 7467 321 2837 2912 11662 11662 EEVQSLREEAEK 12 1 1 Unmodified _EEVQSLREEAEK_ 0 0 1 A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8585 2 723.857177 1445.6998 71142.19 0.71969 0.00052095 0.61007 0.0004416 1.3298 0.00096256 724.359283240832 732.86850963961 26.788 0.23665 26.788 26.69 26.926 0 67 16 5 0 0 0 2.4654E-17 2 12129 153.95 118.44 1 0.74175 0.8429 0 24322000 12593000 11728000 7468 186;1747 2838 2913 11663;11664 11664 EEVQSLREEAEK 12 1 1 Unmodified _EEVQSLREEAEK_ 0 0 1 A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.8687 2 723.857177 1445.6998 72196.62 0.33643 0.00024353 0.27862 0.00020168 0.61505 0.00044521 723.857269211482 732.868527853294 26.318 0.39802 26.318 26.105 26.503 0 73 21 5 0 0 0 1.9912E-28 1 11730 164.9 143.53 1 0.81063 0.93441 0 28654000 14125000 14529000 7469 186;1747 2838 2913 11665 11665 EEVQSLREEAEK 12 1 1 Unmodified _EEVQSLREEAEK_ 0 0 1 A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.9148 3 482.90721 1445.6998 87846.03 0.21918 0.00010584 -0.16333 -7.8871E-05 0.055858 2.6974E-05 482.906821890704 488.914657954402 31.262 0.38315 31.262 31.058 31.441 0 77 19 6 0 0 0 0.041953 1 12664 20.463 17.383 1 1.5792 1.3546 0 2625400 994580 1630800 7470 186;1747 2838 2913 11666 11666 EEVSIEVLK 9 1 0 Unmodified _EEVSIEVLK_ 0 0 0 P57740;B3KMK0 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.3007 2 523.292422 1044.57029 NaN NaN NaN 0.84263 0.00044094 NaN NaN NaN NaN 77.159 0.51461 77.159 76.93 77.445 0 0 0 0 0.040651 1 46729 50.04 11.88 1 NaN NaN 0 7267600 0 7267600 7471 1621 2839 2914 11667 11667 EEVSIEVLK 9 1 0 Unmodified _EEVSIEVLK_ 0 0 0 P57740;B3KMK0 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2941 2 523.292422 1044.57029 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.108 1 77.108 76.608 77.608 0 0 0 0 0.027045 1 46607 53.968 23.801 1 7472 1621 2839 2914 11668 11668 EEVTELLAR 9 0 1 Unmodified _EEVTELLAR_ 0 0 0 A0A087WVZ9;E5KT65;P19388;B4DJ89;A0A087WWX0;A0A0A0MQR7 A0A087WVZ9 A0A087WVZ9 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2919 2 530.287671 1058.56079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.459 1 75.459 74.959 75.959 0 0 0 0 0.0036347 1 44380 69.825 24.743 1 7473 423 2840 2915 11669 11669 EEVTPEQLK 9 1 0 Unmodified _EEVTPEQLK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.7803 2 536.779679 1071.5448 84394.74 0.78378 0.00042072 0.32216 0.00017293 1.1059 0.00059365 536.779907588747 540.786874144755 37.386 0.77133 37.386 37.111 37.882 0 243 64 6 0 0 0 0.001023 2 18940 91.064 54.223 1 0.9099 1.0141 0 61689000 30437000 31252000 7474 2132 2841 2916 11670;11671 11670 EEVTPEQLK 9 1 0 Unmodified _EEVTPEQLK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.7802 2 536.779679 1071.5448 83798.53 0.895 0.00048042 0.40925 0.00021968 1.3043 0.0007001 536.779786493284 540.786880646714 36.575 0.65476 36.575 36.269 36.924 0 224 47 7 0 0 0 2.5787E-05 2 18767 113.26 66.83 1 0.98792 1.11 0 73993000 33648000 40345000 7475 2132 2841 2916 11672;11673 11672 EEYITSALESTEEK 14 1 0 Unmodified _EEYITSALESTEEK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.8809 2 814.880515 1627.74648 68705.13 0.64626 0.00052662 0.95406 0.00077744 1.6003 0.0013041 814.881139190969 818.888421577849 79.155 0.57784 79.155 78.931 79.508 0 101 52 5 0 0 0 0.00014486 3 46928 77.64 77.64 1 1.9805 2.0166 0 14173000 5811600 8361200 7476 1602 2842 2917 11674;11675;11676 11675 EEYITSALESTEEK 14 1 0 Unmodified _EEYITSALESTEEK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.8815 2 814.880515 1627.74648 70350.24 0.41259 0.00033621 0.59418 0.00048418 1.0068 0.0008204 814.880293674473 818.8883965433 78.174 0.46716 78.174 77.981 78.448 0 132 40 5 0 0 0 8.5539E-05 2 47395 87.667 81.284 1 2.1804 2.1764 0 14907000 4597100 10310000 7477 1602 2842 2917 11677;11678 11677 EEYITSALESTEEK 14 1 0 Unmodified _EEYITSALESTEEK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.889 2 814.880515 1627.74648 68108.19 0.58261 0.00047476 -0.57906 -0.00047186 0.0035551 2.897E-06 814.880955369768 818.88744542514 90.814 0.4502 90.814 90.568 91.018 7.6294E-06 96 23 6 0 0 0 0.0046626 1 49514 45.077 40.923 1 1.5123 1.2279 0 2871900 880730 1991100 7478 1602 2842 2917 11679 11679 EFAAALTAER 10 0 1 Unmodified _EFAAALTAER_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;B7Z8K5 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.7835 2 539.780013 1077.54547 84224.2 0.58031 0.00031324 0.28053 0.00015142 0.86084 0.00046467 539.779852365152 544.783879192179 60.089 0.4196 60.089 59.851 60.271 3.8147E-06 167 36 6 0 0 0 6.0796E-08 2 34231 113.66 55.145 1 0.96444 0.9866 0 34212000 18387000 15824000 7479 456 2843 2918 11680;11681 11681 EFAAALTAER 10 0 1 Unmodified _EFAAALTAER_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;B7Z8K5 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.7798 2 539.780013 1077.54547 83316.94 0.9288 0.00050135 -0.3839 -0.00020722 0.5449 0.00029413 539.779725501449 544.783713780041 58.906 0.42754 58.906 58.632 59.06 0 172 41 7 0 0 0 2.4682E-06 3 34238 110.88 54.01 1 0.97745 1.1271 0 54778000 26840000 27938000 7480 456 2843 2918 11682;11683;11684 11684 EFAAALTAER 10 0 1 Unmodified _EFAAALTAER_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;B7Z8K5 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.7803 2 539.780013 1077.54547 83297.57 0.45556 0.0002459 -0.75671 -0.00040846 -0.30116 -0.00016256 539.779562753474 544.783694776885 69.407 0.43782 69.407 69.117 69.555 0 89 28 4 0 0 0 0.0099144 1 36354 54.066 44.285 1 2.126 1.8299 0 7251300 2573900 4677400 7481 456 2843 2918 11685 11685 EFADSLGIPFLETSAK 16 1 0 Unmodified _EFADSLGIPFLETSAK_ 0 0 0 E9PLD0;Q9H0U4;B7Z8M7;Q6FIG4;Q5U0I6;P62820;E7END7;Q92928;Q96RD8 E9PLD0 E9PLD0 RAB1B;RAB1A;RAB1C Ras-related protein Rab-1B;Ras-related protein Rab-1A;Putative Ras-related protein Rab-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.4491 2 862.94071 1723.86687 64907.71 1.0501 0.00090619 -0.091258 -7.8751E-05 0.95886 0.00082744 862.94051540606 866.947578932111 126.32 0.76926 126.32 126.01 126.78 0 323 58 10 0 0 0 5.4106E-07 2 82054 98.407 95.086 1 1.7147 1.8629 0 46844000 16485000 30359000 7482 1246 2844 2919 11686;11687 11687 EFADSLGIPFLETSAK 16 1 0 Unmodified _EFADSLGIPFLETSAK_ 0 0 0 E9PLD0;Q9H0U4;B7Z8M7;Q6FIG4;Q5U0I6;P62820;E7END7;Q92928;Q96RD8 E9PLD0 E9PLD0 RAB1B;RAB1A;RAB1C Ras-related protein Rab-1B;Ras-related protein Rab-1A;Putative Ras-related protein Rab-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.45 2 862.94071 1723.86687 64103.96 0.9799 0.0008456 -0.29663 -0.00025597 0.68327 0.00058962 862.940561257018 866.94770118832 125.94 0.65857 125.94 125.62 126.28 0 233 41 9 0 0 0 1.2316E-17 2 83804 132.14 126.42 1 1.6979 1.9003 0 53922000 21721000 32202000 7483 1246 2844 2919 11688;11689 11688 EFAGEDTSDLFLEER 15 0 1 Unmodified _EFAGEDTSDLFLEER_ 0 0 0 O14980;B3KWD0;B7ZB16;B4DR01 O14980 O14980 XPO1 Exportin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 884.4022 2 879.396864 1756.77917 NaN NaN NaN 0.25807 0.00022695 NaN NaN NaN NaN 100.07 0.50558 100.07 99.796 100.3 0 0 0 0 0.0003568 1 62649 74.46 68.488 1 NaN NaN 0 6579800 0 6579800 7484 1371 2845 2920 11690 11690 EFALSNLK 8 1 0 Unmodified _EFALSNLK_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.2556 2 461.255643 920.496732 89947.23 0.15477 7.1389E-05 -0.14232 -6.5647E-05 0.012447 5.7413E-06 461.255565495326 465.262643869994 72.81 0.26483 72.81 72.707 72.972 0 80 19 6 0 0 0 0.012954 2 42665 66.429 41.755 1 0.84624 0.90879 0 39490000 22171000 17319000 7485 63 2846 2921 11691;11692 11692 EFALSNLK 8 1 0 Unmodified _EFALSNLK_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2631 2 461.255643 920.496732 89584.39 -0.016331 -7.5327E-06 -0.038947 -1.7965E-05 -0.055278 -2.5497E-05 461.255574451401 465.262804828153 71.452 0.29048 71.452 71.352 71.643 0 95 21 6 0 0 0 0.0092222 2 42819 75.243 51.045 1 0.92182 0.9967 0 38528000 20940000 17588000 7486 63 2846 2921 11693;11694 11694 EFASHLQQLQDALNELTEEHSK 22 1 0 Unmodified _EFASHLQQLQDALNELTEEHSK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.4221 3 856.417263 2566.22996 64534.95 0.80168 0.00068657 0.19434 0.00016644 0.99602 0.00085301 856.751963157031 859.088917518758 125.45 0.36348 125.45 125.22 125.58 0 37 12 6 0 0 0 6.1985E-05 1 75290 36.627 33.629 1 2.8726 2.2868 0 6704700 2868400 3836300 7487 186;1747;718 2847 2922 11695 11695 EFASHLQQLQDALNELTEEHSK 22 1 0 Unmodified _EFASHLQQLQDALNELTEEHSK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 859.4241 3 856.417263 2566.22996 65337.14 0.80678 0.00069094 -0.56313 -0.00048228 0.24365 0.00020867 857.085133872194 859.75701185881 125.23 0.41257 125.23 125.03 125.45 0 38 16 6 0 0 0 0.011044 1 74249 31.36 31.36 1 0.93839 0.75044 0 4145600 2408400 1737200 7488 186;1747;718 2847 2922 11696 11696 EFCENLSADCR 11 0 1 Unmodified _EFCENLSADCR_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;C9J9C1 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.7869 2 700.782101 1399.54965 73775.41 0.79967 0.0005604 0.18391 0.00012888 0.98358 0.00068928 700.782258100848 705.786136289288 46.243 0.40619 46.243 46.065 46.471 0 95 34 4 0 0 0 0.00043721 1 24897 78.556 69.342 1 1.1832 1.1966 0 7695600 2931800 4763800 7489 723 2848 2923 11697 11697 EFCENLSADCR 11 0 1 Unmodified _EFCENLSADCR_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;C9J9C1 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.7813 2 700.782101 1399.54965 NaN NaN NaN -0.29408 -0.00020608 NaN NaN NaN NaN 45.255 0.32021 45.255 45.072 45.392 3.8147E-06 0 0 0 0.0027751 1 24810 71.349 60.591 1 NaN NaN 0 5405000 5405000 0 7490 723 2848 2923 11698 11698 EFCENLSADCR 11 0 1 Unmodified _EFCENLSADCR_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;C9J9C1 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.7859 2 700.782101 1399.54965 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.188 1 45.188 44.688 45.688 0 0 0 0 1.1752E-05 1 24769 93.111 80.885 1 7491 723 2848 2923 11699 11699 EFCENLSADCR 11 0 1 Unmodified _EFCENLSADCR_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;C9J9C1 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.2845 2 700.782101 1399.54965 74648.63 0.62687 0.0004393 -0.21877 -0.00015331 0.4081 0.00028599 700.782058120113 705.786270808564 53.595 0.44548 53.595 53.372 53.818 -3.8147E-06 134 30 6 0 0 0 0.0073711 1 26589 52.725 47.942 1 0.94929 0.80414 0 2937500 1525600 1412000 7492 723 2848 2923 11700 11700 EFCENLSADCR 11 0 1 Unmodified _EFCENLSADCR_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;C9J9C1 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.7821 2 700.782101 1399.54965 73224.39 0.4204 0.00029461 -0.31116 -0.00021805 0.10924 7.6552E-05 700.782089641665 705.78615196788 54.149 0.54126 54.149 53.947 54.488 -3.8147E-06 163 40 7 0 0 0 0.0081744 2 26356 51.276 46.493 1 1.0504 0.94871 0 2104200 904960 1199300 7493 723 2848 2923 11701;11702 11701 EFEEGLVSQYK 11 1 0 Unmodified _EFEEGLVSQYK_ 0 0 0 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.8299 2 664.822075 1327.6296 77398.2 0.58574 0.00038942 0.24463 0.00016263 0.83037 0.00055205 664.822013889576 668.829290470172 69.795 0.58562 69.795 69.442 70.028 0 154 47 5 0 0 0 7.5655E-10 2 41624 126.07 101.29 1 1.1163 1.1147 0 15077000 8250300 6826900 7494 780 2849 2924 11703;11704 11704 EFEFSQLPLK 10 1 0 Unmodified _EFEFSQLPLK_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3273 2 619.326796 1236.63904 NaN NaN NaN 0.072601 4.4963E-05 NaN NaN NaN NaN 107.34 0.53922 107.34 106.97 107.51 0 0 0 0 0.0031576 1 66823 91.318 69.187 1 NaN NaN 0 9806600 9806600 0 7495 1794 2850 2925 11705 11705 EFEFSQLPLK 10 1 0 Unmodified _EFEFSQLPLK_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.3269 2 619.326796 1236.63904 NaN NaN NaN -0.21045 -0.00013034 NaN NaN NaN NaN 106.62 0.57533 106.62 106.31 106.89 0 0 0 0 1.0764E-07 1 67928 114.28 92.15 1 NaN NaN 0 11440000 11440000 0 7496 1794 2850 2925 11706 11706 EFEQIDK 7 1 0 Unmodified _EFEQIDK_ 0 0 0 A8K3M3;P18031 A8K3M3 A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.7292 2 454.721633 907.428712 NaN NaN NaN 1.0497 0.0004773 NaN NaN NaN NaN 29.99 0.1455 29.99 29.9 30.046 1.9073E-06 0 0 0 0.045012 1 14598 60.788 27.05 1 NaN NaN 0 3830700 0 3830700 7497 724 2851 2926 11707 11707 EFEQIDK 7 1 0 Unmodified _EFEQIDK_ 0 0 0 A8K3M3;P18031 A8K3M3 A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.7214 2 454.721633 907.428712 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.549 1 29.549 29.049 30.049 1.9073E-06 0 0 0 0.040379 1 14279 69.383 34.491 1 7498 724 2851 2926 11708 11708 EFEQLRK 7 1 1 Unmodified _EFEQLRK_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.2589 2 475.258717 948.50288 87116.38 0.45159 0.00021462 0.47474 0.00022562 0.92633 0.00044025 475.258866611483 484.270001526734 22.348 0.40919 22.348 22.179 22.588 0 93 25 5 0 0 0 0.0076836 2 8415 132.96 50.055 1 0.96018 1.1454 0 50619000 25550000 25069000 7499 2008 2852 2927 11709;11710 11709 EFEQLRK 7 1 1 Unmodified _EFEQLRK_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.259 2 475.258717 948.50288 86677.95 0.18569 8.8253E-05 0.2031 9.6523E-05 0.38879 0.00018478 475.258903319585 484.270054968485 24.22 0.563 24.22 23.99 24.553 0 167 31 8 0 0 0 0.05052 1 8459 69.176 30.357 1 1.5894 1.3653 0 11218000 4613500 6605000 7500 2008 2852 2927 11711 11711 EFEQLRK 7 1 1 Unmodified _EFEQLRK_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.2588 2 475.258717 948.50288 89448.16 0.22237 0.00010568 -0.067146 -3.1912E-05 0.15522 7.3772E-05 475.258776056065 484.269878278467 24.119 0.56911 24.119 23.897 24.466 0 191 33 9 0 0 0 0.019238 2 7917 108.24 44.816 1 1.526 1.2881 0 9080600 3638500 5442100 7501 2008 2852 2927 11712;11713 11713 EFESAIVEAAR 11 0 1 Unmodified _EFESAIVEAAR_ 0 0 0 Q15020;B4DRG9;F8VV04;B4E3R6;F8VVK9;F8VZM2;F8W667 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.3146 2 611.309135 1220.60372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.137 1 73.137 72.637 73.637 0 0 0 0 0.0088364 1 43908 60.518 33.729 1 7502 1748 2853 2928 11714 11714 EFETPEK 7 1 0 Unmodified _EFETPEK_ 0 0 0 Q9Y2X3;B4DUY3;F8WED0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.2082 2 440.208358 878.402163 90246.26 -0.27396 -0.0001206 0.4805 0.00021152 0.20654 9.0919E-05 440.208537426898 444.215509641708 24.408 0.61476 24.408 24.216 24.831 0 125 25 9 0 0 0 0.025144 2 10146 89.369 89.369 1 0.8338 0.96514 0 232350000 125280000 107070000 7503 2129 2854 2929 11715;11716 11716 EFETPEK 7 1 0 Unmodified _EFETPEK_ 0 0 0 Q9Y2X3;B4DUY3;F8WED0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 444.2158 2 440.208358 878.402163 90850.55 -0.10817 -4.7619E-05 0.46816 0.00020609 0.35998 0.00015847 440.208506526429 444.215448043185 26.804 0.94769 26.804 26.528 27.476 0 184 46 8 0 0 0 0.037624 1 10180 60.76 51.519 1 1.0176 0.79946 0 17092000 8711700 8379900 7504 2129 2854 2929 11717 11717 EFFEVANDVIPNLLK 15 1 0 Unmodified _EFFEVANDVIPNLLK_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24 A0A024R570 A0A024R570 MEN1 Menin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 878.9769 2 874.466895 1746.91924 64522.28 0.92687 0.00081052 0.26094 0.00022818 1.1878 0.0010387 874.968798234457 878.474201509895 133.21 0.2805 133.21 133.04 133.32 0 26 8 4 0 0 0 0.00022114 1 87122 65.5 65.5 1 0.97637 1.0197 0 12174000 7277000 4897500 7505 171 2855 2930 11718 11718 EFFEVANDVIPNLLK 15 1 0 Unmodified _EFFEVANDVIPNLLK_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24 A0A024R570 A0A024R570 MEN1 Menin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.9766 2 874.466895 1746.91924 NaN NaN NaN 0.80549 0.00070438 NaN NaN NaN NaN 132.93 0.48938 132.93 132.67 133.16 0 0 0 0 0.00027358 3 89056 76.143 70.039 1 NaN NaN 0 4785100 0 4785100 7506 171 2855 2930 11719;11720;11721 11720 EFFEYFGNFAFDK 13 1 0 Unmodified _EFFEYFGNFAFDK_ 0 0 0 Q9NVV4 Q9NVV4 Q9NVV4 MTPAP Poly(A) RNA polymerase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.8766 2 830.869556 1659.72456 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.14 1 126.14 125.64 126.64 -7.6294E-06 0 0 0 0.028554 1 82060 44.188 31.612 1 7507 2075 2856 2931 11722 11722 EFFEYFGNFAFDK 13 1 0 Unmodified _EFFEYFGNFAFDK_ 0 0 0 Q9NVV4 Q9NVV4 Q9NVV4 MTPAP Poly(A) RNA polymerase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.8766 2 830.869556 1659.72456 NaN NaN NaN 0.091814 7.6285E-05 NaN NaN NaN NaN 125.77 0.24274 125.77 125.62 125.86 -7.6294E-06 0 0 0 0.015499 2 83812 50.284 40.33 1 NaN NaN 0 1324400 0 1324400 7508 2075 2856 2931 11723;11724 11724 EFFFNVYINK 10 1 0 Unmodified _EFFFNVYINK_ 0 0 0 O43248;Q14DW8;A0A087WWK9;P31277 O43248;Q14DW8 O43248 HOXC11;HOXD11 Homeobox protein Hox-C11;Homeobox protein Hox-D11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.835 2 660.834788 1319.65502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.4 1 114.4 113.9 114.9 -7.6294E-06 0 0 0 0.020744 1 74411 62.2 40.114 1 7509 1383;426 2857 2932 11725 11725 EFFMSFGNVVELR 13 0 1 Oxidation (M) _EFFM(ox)SFGNVVELR_ EFFM(1)SFGNVVELR EFFM(55.4)SFGNVVELR 0 1 0 A0A024RDB2;A0A024RDE5;Q9UN86 A0A024RDB2 A0A024RDB2 G3BP2 Ras GTPase-activating protein-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.8901 2 795.884684 1589.75481 NaN NaN NaN -0.37 -0.00029448 NaN NaN NaN NaN 117.05 0.40372 117.05 116.77 117.17 -7.6294E-06 0 0 0 0.0018848 1 74950 55.401 48.138 1 NaN NaN 0 3451100 0 3451100 7510 382 2858 2933 11726 11726 280 EFFMSFGNVVELR 13 0 1 Oxidation (M) _EFFM(ox)SFGNVVELR_ EFFM(1)SFGNVVELR EFFM(67.73)SFGNVVELR 0 1 0 A0A024RDB2;A0A024RDE5;Q9UN86 A0A024RDB2 A0A024RDB2 G3BP2 Ras GTPase-activating protein-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.392 2 795.884684 1589.75481 NaN NaN NaN 0.525 0.00041784 NaN NaN NaN NaN 116.51 0.32778 116.51 116.34 116.67 0 0 0 0 0.00085775 1 76333 67.726 55.512 1 NaN NaN 0 2641200 0 2641200 7511 382 2858 2933 11727 11727 280 EFFMSFGNVVELR 13 0 1 Oxidation (M) _EFFM(ox)SFGNVVELR_ EFFM(1)SFGNVVELR EFFM(57.79)SFGNVVELR 0 1 0 A0A024RDB2;A0A024RDE5;Q9UN86 A0A024RDB2 A0A024RDB2 G3BP2 Ras GTPase-activating protein-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.0782 2 795.884684 1589.75481 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.63 1 116.63 116.13 117.13 -7.6294E-06 0 0 0 0.0023814 1 76358 57.785 39.966 1 7512 382 2858 2933 11728 11728 280 EFGATECINPQDFSK 15 1 0 Unmodified _EFGATECINPQDFSK_ 0 0 0 Q6IRT1;Q6FI45;P11766;H0YAG8 Q6IRT1 Q6IRT1 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 875.8967 2 871.888152 1741.76175 NaN NaN NaN -0.0084097 -7.3323E-06 NaN NaN NaN NaN 84.67 0.41184 84.67 84.499 84.911 0 0 0 0 0.0050018 1 50723 56.087 49.983 1 NaN NaN 0 7440900 0 7440900 7513 1472 2859 2934 11729 11729 EFGATECINPQDFSK 15 1 0 Unmodified _EFGATECINPQDFSK_ 0 0 0 Q6IRT1;Q6FI45;P11766;H0YAG8 Q6IRT1 Q6IRT1 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 876.3973 2 871.888152 1741.76175 NaN NaN NaN 0.20921 0.0001824 NaN NaN NaN NaN 83.905 0.39096 83.905 83.647 84.038 0 0 0 0 0.045756 1 51526 37.613 31.642 1 NaN NaN 0 7890100 0 7890100 7514 1472 2859 2934 11730 11730 EFGATECINPQDFSK 15 1 0 Unmodified _EFGATECINPQDFSK_ 0 0 0 Q6IRT1;Q6FI45;P11766;H0YAG8 Q6IRT1 Q6IRT1 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 876.3995 2 871.888152 1741.76175 66550.11 0.11426 9.9621E-05 0.86656 0.00075555 0.98082 0.00085517 871.888241531665 875.896048068616 96.987 0.47818 96.987 96.752 97.23 0 82 22 7 0 0 0 0.0083147 1 53725 35.737 35.737 1 1.4994 1.2411 0 1622700 583920 1038800 7515 1472 2859 2934 11731 11731 EFGFSGLNVK 10 1 0 Unmodified _EFGFSGLNVK_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.2861 2 549.284931 1096.55531 86505.08 0.60528 0.00033247 0.32749 0.00017989 0.93277 0.00051236 549.285431750215 553.292040169288 90.974 0.43044 90.974 90.812 91.242 -7.6294E-06 86 36 5 0 0 0 0.0073232 2 56323 57.59 57.59 1 0.6744 0.70358 0 10067000 5697200 4370200 7516 1725 2860 2935 11732;11733 11733 EFGIGDLVWGK 11 1 0 Unmodified _EFGIGDLVWGK_ 0 0 0 Q9UBC3;Q59H79;B4DSJ7;B4DHM3;B4DUZ5;Q2PJS8 Q9UBC3 Q9UBC3 DNMT3B DNA (cytosine-5)-methyltransferase 3B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.3207 2 610.819138 1219.62372 82845.7 0.55073 0.0003364 0.23948 0.00014628 0.79021 0.00048267 611.32075288017 614.826081972108 118.65 0.43063 118.65 118.48 118.91 0 52 24 4 0 0 0 0.0082908 2 76192 51.066 51.066 1 0.81797 0.90693 0 2697100 1338000 1359000 7517 2097 2861 2936 11734;11735 11735 EFGIGDLVWGK 11 1 0 Unmodified _EFGIGDLVWGK_ 0 0 0 Q9UBC3;Q59H79;B4DSJ7;B4DHM3;B4DUZ5;Q2PJS8 Q9UBC3 Q9UBC3 DNMT3B DNA (cytosine-5)-methyltransferase 3B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.8267 2 610.819138 1219.62372 NaN NaN NaN 0.26718 0.0001632 NaN NaN NaN NaN 118.2 0.33645 118.2 118.04 118.38 0 0 0 0 0.0026408 1 77671 72.643 67.161 1 NaN NaN 0 2192700 0 2192700 7518 2097 2861 2936 11736 11736 EFGIGDLVWGK 11 1 0 Unmodified _EFGIGDLVWGK_ 0 0 0 Q9UBC3;Q59H79;B4DSJ7;B4DHM3;B4DUZ5;Q2PJS8 Q9UBC3 Q9UBC3 DNMT3B DNA (cytosine-5)-methyltransferase 3B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.8264 2 610.819138 1219.62372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.03 1 118.03 117.53 118.53 0 0 0 0 0.033977 1 77540 47.198 26.868 1 7519 2097 2861 2936 11737 11737 EFGIGDLVWGK 11 1 0 Unmodified _EFGIGDLVWGK_ 0 0 0 Q9UBC3;Q59H79;B4DSJ7;B4DHM3;B4DUZ5;Q2PJS8 Q9UBC3 Q9UBC3 DNMT3B DNA (cytosine-5)-methyltransferase 3B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.8201 2 610.819138 1219.62372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.25 1 118.25 117.75 118.75 -7.6294E-06 0 0 0 0.00074756 1 77733 71.614 50.107 1 7520 2097 2861 2936 11738 11738 EFHGNIIK 8 1 0 Unmodified _EFHGNIIK_ 0 0 0 B4E312;A0A075B7D9;Q92804 B4E312 B4E312 TAF15 TATA-binding protein-associated factor 2N MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.2629 2 479.261259 956.507966 85930.55 0.25823 0.00012376 0.59308 0.00028424 0.85131 0.000408 479.261355832254 483.268557531007 29.087 0.38143 29.087 28.85 29.231 0 40 20 5 0 0 0 0.024382 1 14035 55.902 37.523 1 1.7774 1.9269 0 44605000 14647000 29957000 7521 399 2862 2937 11739 11739 EFHLNESGDPSSK 13 1 0 Unmodified _EFHLNESGDPSSK_ 0 0 0 A0A0C4DFV9;B2RCX0;A0A024R895;Q5VXV3;A0A087X027;Q01105;P0DME0 A0A0C4DFV9 A0A0C4DFV9 SET;SETSIP Protein SET;Protein SETSIP MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.8349 2 723.82842 1445.64229 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.047 1 31.047 30.547 31.547 -1.9073E-06 0 0 0 0.026695 1 15301 44.425 37.025 1 7522 244 2863 2938 11740 11740 EFIGQQLILIIK 12 1 0 Unmodified _EFIGQQLILIIK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.9442 2 707.937045 1413.85954 72790.98 0.20361 0.00014414 0.62974 0.00044581 0.83335 0.00058996 707.937756484189 711.944064643592 129.31 0.24481 129.31 129.23 129.47 0 95 19 6 0 0 0 6.1006E-30 2 84296 174.02 156.51 1 0.77367 0.82402 0 31879000 17126000 14753000 7523 1995 2864 2939 11741;11742 11742 EFIGQQLILIIK 12 1 0 Unmodified _EFIGQQLILIIK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.9432 2 707.937045 1413.85954 72994.69 0.45962 0.00032538 0.52611 0.00037245 0.98573 0.00069784 707.937694427204 711.944064431618 128.88 0.35199 128.88 128.75 129.1 0 161 34 7 0 0 0 1.6058E-37 2 86067 175.91 161.79 1 0.91328 1.0281 0 57214000 32174000 25040000 7524 1995 2864 2939 11743;11744 11744 EFIPCIFSSGIK 12 1 0 Unmodified _EFIPCIFSSGIK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.368 2 699.360313 1396.70607 75414.03 0.65371 0.00045718 0.10904 7.6257E-05 0.76275 0.00053343 699.36014569529 703.367648847902 116.12 0.53905 116.12 115.89 116.43 0 68 33 4 0 0 0 0.001682 1 74045 60.518 60.518 1 0.87123 0.88354 0 6607500 2558000 4049500 7525 1392 2865 2940 11745 11745 EFIPCIFSSGIK 12 1 0 Unmodified _EFIPCIFSSGIK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.3704 2 699.360313 1396.70607 NaN NaN NaN 0.069451 4.8571E-05 NaN NaN NaN NaN 115.45 0.37778 115.45 115.33 115.71 0 0 0 0 0.041567 1 75295 43.308 31.818 1 NaN NaN 0 3788000 0 3788000 7526 1392 2865 2940 11746 11746 EFIPCIFSSGIK 12 1 0 Unmodified _EFIPCIFSSGIK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.3681 2 699.360313 1396.70607 71101.99 0.65899 0.00046087 1.0324 0.00072199 1.6914 0.0011829 699.360713828538 703.368220473328 127.43 0.39156 127.43 127.21 127.6 0 71 16 7 0 0 0 0.041943 2 75845 33.961 31.109 1 1.3327 1.0887 0 1878200 680830 1197400 7527 1392 2865 2940 11747;11748 11747 EFIPLPR 7 0 1 Unmodified _EFIPLPR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2595 2 436.255446 870.496338 NaN NaN NaN 0.14829 6.4694E-05 NaN NaN NaN NaN 85.836 0.23859 85.836 85.722 85.96 0 0 0 0 0.036931 1 52869 64.776 31.847 1 NaN NaN 0 39987000 0 39987000 7528 1392 2866 2941 11749 11749 EFLDFFWDIAKPEQETR 17 1 1 Unmodified _EFLDFFWDIAKPEQETR_ 0 0 1 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.6881 3 724.352983 2170.03712 74044.45 0.75043 0.00054358 -0.034936 -2.5306E-05 0.71549 0.00051827 724.687161974009 730.360295891452 130 0.83051 130 129.65 130.48 0 203 56 7 0 0 0 3.5692E-05 1 86739 63.918 60.477 1 0.76098 0.83723 0 5809300 3743600 2065600 7529 1997 2867 2942 11750 11750 EFLDFFWDIAKPEQETR 17 1 1 Unmodified _EFLDFFWDIAKPEQETR_ 0 0 1 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.3531 3 724.352983 2170.03712 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.77 1 129.77 129.27 130.27 0 0 0 0 0.00043873 1 86709 56.959 49.062 1 7530 1997 2867 2942 11751 11751 EFLEQLPK 8 1 0 Unmodified _EFLEQLPK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.2768 2 502.276575 1002.5386 87053.21 0.18914 9.5E-05 0.31499 0.00015821 0.50413 0.00025321 502.276382775853 506.283875898774 77.159 1.2645 77.159 76.369 77.634 0 300 106 6 0 0 0 0.011407 1 45473 69.998 69.998 1 1.1604 1.1777 0 13526000 6425600 7100800 7531 1849 2868 2943 11752 11752 EFLEQLPK 8 1 0 Unmodified _EFLEQLPK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.2764 2 502.276575 1002.5386 NaN NaN NaN 0.16593 8.3342E-05 NaN NaN NaN NaN 76.052 0.59493 76.052 75.805 76.4 7.6294E-06 0 0 0 0.0079089 1 45821 81.297 65.857 1 NaN NaN 0 7984800 7984800 0 7532 1849 2868 2943 11753 11753 EFLFSLPDK 9 1 0 Unmodified _EFLFSLPDK_ 0 0 0 A0A024R9G7;Q6PL18 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.298 2 548.289682 1094.56481 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.02 1 110.02 109.52 110.52 0 0 0 0 0.018473 1 69002 56.729 40.848 1 7533 278 2869 2944 11754 11754 EFLLSLDDSVDETEAVK 17 1 0 Unmodified _EFLLSLDDSVDETEAVK_ 0 0 0 Q9BXP5;H7C0U8 Q9BXP5 Q9BXP5 SRRT Serrate RNA effector molecule homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.9769 2 955.467486 1908.92042 NaN NaN NaN -1.4796 -0.0014137 NaN NaN NaN NaN 114.58 0.22002 114.58 114.45 114.67 0 0 0 0 0.00015713 2 74570 67.456 57.669 1 NaN NaN 0 2683800 0 2683800 7534 2013 2870 2945 11755;11756 11756 EFLQQQYR 8 0 1 Unmodified _EFLQQQYR_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6;C9JRC7;C9JQA4 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.2848 2 556.28018 1110.54581 82850.15 0.3289 0.00018296 -0.29937 -0.00016653 0.029526 1.6425E-05 556.280109031842 561.284341746312 51.103 0.6825 51.103 50.76 51.443 0 139 37 6 0 0 0 0.047328 1 24502 44.721 31.454 1 1.2255 1.0672 0 1802800 742120 1060700 7535 641 2871 2946 11757 11757 EFLVAGGEDFK 11 1 0 Unmodified _EFLVAGGEDFK_ 0 0 0 Q9Y3F4;B0AZV0;H0YH33 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.7707 2 606.300778 1210.587 78833.11 1.2126 0.00073521 -0.36474 -0.00022114 0.84788 0.00051407 606.300876965317 610.307464519827 84.147 0.64032 84.147 83.859 84.499 7.6294E-06 186 50 6 0 0 0 0.024744 1 50574 69.275 69.275 1 3.4587 3.7401 0 42893000 6967000 35926000 7536 2136 2872 2947 11758 11758 EFLVAGGEDFK 11 1 0 Unmodified _EFLVAGGEDFK_ 0 0 0 Q9Y3F4;B0AZV0;H0YH33 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.3087 2 606.300778 1210.587 NaN NaN NaN 0.92763 0.00056242 NaN NaN NaN NaN 83.107 0.78284 83.107 82.711 83.494 0 0 0 0 0.0020746 1 50890 78.098 50.356 1 NaN NaN 0 33459000 0 33459000 7537 2136 2872 2947 11759 11759 EFNAEVHR 8 0 1 Unmodified _EFNAEVHR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.2439 2 501.243598 1000.47264 85383.77 0.27579 0.00013824 -0.1854 -9.2932E-05 0.09039 4.5307E-05 501.243708623088 506.247538402327 21.247 0.91183 21.247 21.059 21.971 0 204 49 7 0 0 0 1.3991E-114 2 7537 265.41 224.83 1 1.0157 1.2065 0 946090000 460220000 485870000 7538 653 2873 2948 11760;11761 11761 EFNAEVHR 8 0 1 Unmodified _EFNAEVHR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 334.4981 3 334.498157 1000.47264 104034.6 -0.08347 -2.7921E-05 0.12641 4.2283E-05 0.042938 1.4363E-05 334.498141152082 337.834259812268 21.247 0.59649 21.247 21.094 21.69 0 122 29 8 0 0 0 0.0014015 2 7558 85.064 69.804 1 0.98387 1.1358 0 156850000 75654000 81200000 7539 653 2873 2948 11762;11763 11763 EFNAEVHR 8 0 1 Unmodified _EFNAEVHR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2438 2 501.243598 1000.47264 84035.43 0.15423 7.7309E-05 -0.38643 -0.00019369 -0.23219 -0.00011639 501.243781577872 506.247347601576 21.083 0.70318 21.083 20.94 21.643 0 180 33 9 0 0 0 1.2949E-09 2 7253 161.9 146.05 1 0.94504 1.1096 0 847360000 407080000 440280000 7540 653 2873 2948 11764;11765 11765 EFNAEVHR 8 0 1 Unmodified _EFNAEVHR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 334.4982 3 334.498157 1000.47264 103186.3 -0.0037605 -1.2579E-06 -0.064266 -2.1497E-05 -0.068026 -2.2755E-05 334.498115013436 337.834169207272 21.113 0.42282 21.113 20.959 21.382 0 118 20 8 0 0 0 0.0014015 2 7289 85.064 69.804 1 0.98752 1.1282 0 151300000 75461000 75839000 7541 653 2873 2948 11766;11767 11767 EFNAEVHR 8 0 1 Unmodified _EFNAEVHR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.2437 2 501.243598 1000.47264 84715.05 0.10505 5.2655E-05 0.19213 9.6306E-05 0.29718 0.00014896 501.243669521717 506.247669947751 23.035 0.91169 23.035 22.826 23.738 0 168 42 10 0 0 0 8.6205E-06 2 7599 146.81 123.91 1 0.84658 0.72918 0 60878000 32380000 28497000 7542 653 2873 2948 11768;11769 11768 EFNAEVHR 8 0 1 Unmodified _EFNAEVHR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 334.4981 3 334.498157 1000.47264 103099.6 -0.2622 -8.7705E-05 0.45929 0.00015363 0.19709 6.5926E-05 334.498230780938 337.834336226613 23.031 0.37954 23.031 22.869 23.249 0 74 15 7 0 0 0 0.014842 2 7629 38.776 29.418 1 0.88491 0.74709 0 9594300 4812600 4781700 7543 653 2873 2948 11770;11771 11770 EFNAEVHR 8 0 1 Unmodified _EFNAEVHR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.2438 2 501.243598 1000.47264 83853.08 -0.019045 -9.546E-06 0.13275 6.6538E-05 0.1137 5.6992E-05 501.243765238219 506.24764544983 22.953 0.86077 22.953 22.737 23.597 0 177 38 9 0 0 0 5.1002E-09 2 7098 158.07 128.93 1 0.93302 0.81403 0 53531000 28184000 25347000 7544 653 2873 2948 11772;11773 11773 EFNAEVHR 8 0 1 Unmodified _EFNAEVHR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 337.8343 3 334.498157 1000.47264 102138 -0.30046 -0.0001005 0.4444 0.00014865 0.14394 4.8147E-05 334.498228842787 337.834347807386 22.955 0.40395 22.955 22.775 23.179 0 89 17 7 0 0 0 0.036488 2 7116 25.137 21.437 1 0.94987 0.78403 0 8220400 4048000 4172400 7545 653 2873 2948 11774;11775 11775 EFNAEVHRK 9 1 1 Unmodified _EFNAEVHRK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.3021 2 565.291079 1128.56761 79827.62 0.45622 0.0002579 -0.058403 -3.3015E-05 0.39782 0.00022488 565.290937336189 574.302126785502 16.972 0.56374 16.972 16.743 17.307 0 71 17 8 0 0 0 3.0602E-08 2 4151 166.09 146.3 1 0.9456 1.1221 0 43095000 22155000 20940000 7546 653 2874 2949 11776;11777 11776 EFNAEVHRK 9 1 1 Unmodified _EFNAEVHRK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 377.1964 3 377.196478 1128.56761 NaN NaN NaN 0.41669 0.00015717 NaN NaN NaN NaN 16.972 0.51096 16.972 16.714 17.225 0 0 0 0 0.00034196 1 4180 76.827 58.602 1 NaN NaN 0 15321000 15321000 0 7547 653 2874 2949 11778 11778 EFNAEVHRK 9 1 1 Unmodified _EFNAEVHRK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 383.2037 3 377.196478 1128.56761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 16.958 1 16.958 16.458 17.458 0 0 0 0 0.021005 1 4179 47.603 35.026 1 7548 653 2874 2949 11779 11779 EFNAEVHRK 9 1 1 Unmodified _EFNAEVHRK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.3028 2 565.291079 1128.56761 80694.05 0.22364 0.00012642 0.064685 3.6566E-05 0.28832 0.00016299 565.290991634002 574.302261090798 16.381 0.50932 16.381 16.239 16.748 1.9073E-06 135 26 8 0 0 0 4.3502E-05 2 3527 119.86 119.86 1 1.0318 1.1836 0 23960000 11537000 12423000 7549 653 2874 2949 11780;11781 11780 EFNAEVHRK 9 1 1 Unmodified _EFNAEVHRK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 383.2035 3 377.196478 1128.56761 96644.52 -0.23291 -8.7854E-05 -0.11087 -4.1819E-05 -0.34378 -0.00012967 377.196373304186 383.20392986617 16.4 0.40046 16.4 16.186 16.587 0 105 23 8 0 0 0 0.0038108 1 3537 54.982 49.883 1 1.0531 1.1983 0 18969000 8958300 10011000 7550 653 2874 2949 11782 11782 EFNAEVHRK 9 1 1 Unmodified _EFNAEVHRK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 377.1965 3 377.196478 1128.56761 93604.34 -0.089885 -3.3904E-05 0.024205 9.13E-06 -0.06568 -2.4774E-05 377.196411778908 383.20402903725 17.199 0.2788 17.199 17.095 17.374 0 56 12 7 0 0 0 0.040452 1 3673 23.32 21.165 1 1.0906 0.92482 0 3026500 1335800 1690700 7551 653 2874 2949 11783 11783 EFNAEVHRK 9 1 1 Unmodified _EFNAEVHRK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.3023 2 565.291079 1128.56761 79171.16 0.084941 4.8016E-05 0.21463 0.00012133 0.29957 0.00016935 565.291037093738 574.302463707314 17.104 0.20037 17.104 17.026 17.226 0 85 15 8 0 0 0 0.023187 1 3255 36.772 32.838 1 1.0574 0.89979 0 3135100 1396500 1738600 7552 653 2874 2949 11784 11784 EFNAFVLDK 9 1 0 Unmodified _EFNAFVLDK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.7883 2 541.779482 1081.54441 79783.09 0.64721 0.00035065 -0.048934 -2.6512E-05 0.59828 0.00032413 541.779380909702 545.786339759523 89.034 0.32066 89.034 88.882 89.203 0 100 23 9 0 0 0 0.00028282 2 53691 103.55 85.511 1 0.91799 1.0784 0 308670000 166040000 142620000 7553 1756 2875 2950 11785;11786 11786 EFNAFVLDK 9 1 0 Unmodified _EFNAFVLDK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.9763 2 541.779482 1081.54441 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.143 1 89.143 88.643 89.643 -7.6294E-06 0 0 0 0.04806 1 53805 47.198 25.67 1 7554 1756 2875 2950 11787 11787 EFNAFVLDK 9 1 0 Unmodified _EFNAFVLDK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.7866 2 541.779482 1081.54441 80810.15 0.85536 0.00046342 0.52562 0.00028477 1.381 0.00074819 541.779681648408 545.786621442093 87.897 0.31295 87.897 87.783 88.096 0 97 24 9 0 0 0 0.00018162 3 54178 114.97 89.232 1 0.92646 1.0801 0 256440000 137820000 118620000 7555 1756 2875 2950 11788;11789;11790 11789 EFNAFVLDK 9 1 0 Unmodified _EFNAFVLDK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.7875 2 541.779482 1081.54441 82433.19 0.50114 0.0002715 0.13963 7.565E-05 0.64077 0.00034715 541.779450688711 545.786530144491 101.63 0.6051 101.63 101.17 101.77 -7.6294E-06 213 40 8 0 0 0 0.046824 1 57379 39.305 32.855 1 1.2513 1.0074 0 22022000 9695100 12326000 7556 1756 2875 2950 11791 11791 EFNAFVLDK 9 1 0 Unmodified _EFNAFVLDK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.7795 2 541.779482 1081.54441 82571.2 0.46811 0.00025361 0.077939 4.2226E-05 0.54605 0.00029584 541.779397764356 545.786517699057 101.42 0.62679 101.42 101 101.63 7.6294E-06 180 37 8 0 0 0 0.040826 1 56517 48.423 42.676 1 1.2268 0.99489 0 24507000 10792000 13715000 7557 1756 2875 2950 11792 11792 EFNEDGALAVLQQFK 15 1 0 Unmodified _EFNEDGALAVLQQFK_ 0 0 0 Q05CK9;Q59GL1;B2R8Z8;O60506;F6UXX1 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 859.4371 2 854.930677 1707.8468 65900.61 1.0928 0.00093426 -0.21793 -0.00018632 0.87486 0.00074794 854.930197593873 858.937475914223 121.57 0.81402 121.57 121.13 121.95 0 181 37 7 0 0 0 0.00044456 1 78443 57.348 57.348 1 1.9683 1.9304 0 22667000 8181500 14485000 7558 864 2876 2951 11793 11793 EFNEDGALAVLQQFK 15 1 0 Unmodified _EFNEDGALAVLQQFK_ 0 0 0 Q05CK9;Q59GL1;B2R8Z8;O60506;F6UXX1 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.4695 2 854.930677 1707.8468 65916.38 0.96188 0.00082234 0.12563 0.00010741 1.0875 0.00092974 855.432891984063 858.937849348986 121.12 0.60602 121.12 120.82 121.42 0 149 33 7 0 0 0 1.1441E-09 1 80202 105.13 105.13 1 1.8936 1.9127 0 26805000 10449000 16355000 7559 864 2876 2951 11794 11794 EFNEDGALAVLQQFK 15 1 0 Unmodified _EFNEDGALAVLQQFK_ 0 0 0 Q05CK9;Q59GL1;B2R8Z8;O60506;F6UXX1 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 859.4404 2 854.930677 1707.8468 NaN NaN NaN 1.3338 0.0011403 NaN NaN NaN NaN 134.02 0.42825 134.02 133.69 134.12 0 0 0 0 0.0015056 1 80774 65.574 52.374 1 NaN NaN 0 2941700 0 2941700 7560 864 2876 2951 11795 11795 EFNEEGALSVLQQFK 15 1 0 Unmodified _EFNEEGALSVLQQFK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.9437 2 869.935959 1737.85737 66387.41 0.80718 0.00070219 -0.17285 -0.00015037 0.63433 0.00055182 869.935811156419 873.942691015419 120.04 0.42687 120.04 119.88 120.31 0 123 29 6 0 0 0 0.00067637 1 77263 52.391 52.391 1 2.0291 2.1145 0 12297000 3619200 8678200 7561 855 2877 2952 11796 11796 EFNEEGALSVLQQFK 15 1 0 Unmodified _EFNEEGALSVLQQFK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.9438 2 869.935959 1737.85737 67042.41 0.7063 0.00061444 -1.863 -0.0016207 -1.1567 -0.0010063 870.437927382747 873.942540211258 119.61 0.41718 119.61 119.43 119.85 0 143 30 8 0 0 0 0.00075139 1 78807 50.786 50.786 1 1.8135 1.828 0 13378000 5277800 8100000 7562 855 2877 2952 11797 11797 EFNEEGALSVLQQFK 15 1 0 Unmodified _EFNEEGALSVLQQFK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 874.4434 2 869.935959 1737.85737 NaN NaN NaN -2.4626 -0.0021423 NaN NaN NaN NaN 132.45 0.24565 132.45 132.27 132.52 0 0 0 0 0.051927 1 79641 36.447 30.063 1 NaN NaN 0 1236400 0 1236400 7563 855 2877 2952 11798 11798 EFPITEAVGSDK 12 1 0 Unmodified _EFPITEAVGSDK_ 0 0 0 Q6P0N0;H0YJM1 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.822 2 646.822075 1291.6296 75282.9 0.8225 0.00053201 -0.37166 -0.00024039 0.45084 0.00029162 646.822167630218 650.828376502627 76.341 0.66583 76.341 75.952 76.618 0 138 53 4 0 0 0 0.022116 1 45033 46.706 46.706 1 0.7368 0.76528 0 11413000 5271800 6141000 7564 1849 2878 2953 11799 11799 EFPITEAVGSDK 12 1 0 Unmodified _EFPITEAVGSDK_ 0 0 0 Q6P0N0;H0YJM1 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.3235 2 646.822075 1291.6296 75152.44 0.59953 0.00038779 0.13219 8.5506E-05 0.73173 0.0004733 646.821881381569 650.828964804598 86.485 0.56942 86.485 86.295 86.864 0 151 36 7 0 0 0 0.0016389 1 47410 70.977 70.977 1 1.3887 1.097 0 5232300 2267200 2965100 7565 1849 2878 2953 11800 11800 EFPITEAVGSDK 12 1 0 Unmodified _EFPITEAVGSDK_ 0 0 0 Q6P0N0;H0YJM1 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.8292 2 646.822075 1291.6296 75704.22 0.61112 0.00039529 0.71477 0.00046233 1.3259 0.00085762 646.821966720653 650.828855826453 86.602 0.67468 86.602 86.378 87.053 0 180 44 7 0 0 0 0.020361 1 46642 48.981 48.981 1 1.3626 1.0636 0 3446100 1361100 2085000 7566 1849 2878 2953 11801 11801 EFPPGTPR 8 0 1 Unmodified _EFPPGTPR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.7321 2 450.732335 899.450116 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.325 1 39.325 38.825 39.825 0 0 0 0 0.051419 1 20370 54.205 24.829 1 7567 1665 2879 2954 11802 11802 EFPVSSGSQHR 11 0 1 Unmodified _EFPVSSGSQHR_ 0 0 0 P18583;Q6ZRV7;J3QSZ5;B3KRA1;H7C1M2;H7C2G8 P18583 P18583 SON Protein SON ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.8011 2 615.796726 1229.5789 NaN NaN NaN -0.12688 -7.813E-05 NaN NaN NaN NaN 23.166 0.27106 23.166 22.979 23.25 0 0 0 0 0.015675 1 9026 54.416 41.889 1 NaN NaN 0 5888600 0 5888600 7568 1499 2880 2955 11803 11803 EFQEELSR 8 0 1 Unmodified _EFQEELSR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.252 2 519.248546 1036.48254 83861.91 0.28512 0.00014805 0.24368 0.00012653 0.5288 0.00027458 519.248824822976 524.252419229992 37.349 0.3916 37.349 37.169 37.561 0 94 32 4 0 0 0 0.0088018 1 19344 77.058 61.396 1 1.3126 1.2881 0 14056000 4551500 9504100 7569 1581 2881 2956 11804 11804 EFQLTEENTK 10 1 0 Unmodified _EFQLTEENTK_ 0 0 0 Q9NVV4;Q5T852 Q9NVV4 Q9NVV4 MTPAP Poly(A) RNA polymerase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.8059 2 619.7986 1237.58265 NaN NaN NaN 0.30225 0.00018733 NaN NaN NaN NaN 47.368 0.47297 47.368 47.155 47.628 0 0 0 0 3.2353E-08 1 25702 115.71 85.529 1 NaN NaN 0 10911000 0 10911000 7570 2075 2882 2957 11805 11805 EFQLTEENTK 10 1 0 Unmodified _EFQLTEENTK_ 0 0 0 Q9NVV4;Q5T852 Q9NVV4 Q9NVV4 MTPAP Poly(A) RNA polymerase, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.7991 2 619.7986 1237.58265 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.542 1 47.542 47.042 48.042 0 0 0 0 0.0030557 1 25804 66.692 43.673 1 7571 2075 2882 2957 11806 11806 EFQLTEENTK 10 1 0 Unmodified _EFQLTEENTK_ 0 0 0 Q9NVV4;Q5T852 Q9NVV4 Q9NVV4 MTPAP Poly(A) RNA polymerase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.8054 2 619.7986 1237.58265 NaN NaN NaN -1.2101 -0.00075004 NaN NaN NaN NaN 46.476 0.3584 46.476 46.268 46.627 0 0 0 0 3.8359E-11 1 25672 120.15 100.12 1 NaN NaN 0 12223000 0 12223000 7572 2075 2882 2957 11807 11807 EFQLTEENTK 10 1 0 Unmodified _EFQLTEENTK_ 0 0 0 Q9NVV4;Q5T852 Q9NVV4 Q9NVV4 MTPAP Poly(A) RNA polymerase, mitochondrial MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 623.8062 2 619.7986 1237.58265 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.483 1 54.483 53.983 54.983 0 0 0 0 0.00035294 1 27175 75.378 52.359 1 7573 2075 2882 2957 11808 11808 EFSANNPFK 9 1 0 Unmodified _EFSANNPFK_ 0 0 0 Q12873;H7C2H0 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.2534 2 527.253631 1052.49271 NaN NaN NaN 0.39963 0.00021071 NaN NaN NaN NaN 58.341 0.22639 58.341 58.213 58.44 0 0 0 0 0.0023541 1 33905 81.119 60.837 1 NaN NaN 0 13761000 13761000 0 7574 1701 2883 2958 11809 11809 EFSGHQGQINDMAFSPDGR 19 0 1 Oxidation (M) _EFSGHQGQINDM(ox)AFSPDGR_ EFSGHQGQINDM(1)AFSPDGR EFSGHQGQINDM(52.61)AFSPDGR 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.6416 3 703.641198 2107.90177 72050.57 0.72357 0.00050913 0.20919 0.00014719 0.93275 0.00065632 703.641092706629 707.312105235947 51.308 0.54557 51.308 50.954 51.499 0 234 50 8 0 0 0 9.2578E-06 1 28391 52.612 52.612 1 1.3241 1.4736 0 78140000 33375000 44765000 7575 486 2884 2959 11810 11810 330 EFSGHQGQINDMAFSPDGR 19 0 1 Oxidation (M) _EFSGHQGQINDM(ox)AFSPDGR_ EFSGHQGQINDM(1)AFSPDGR EFSGHQGQINDM(70.56)AFSPDGR 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.9783 3 703.641198 2107.90177 72153.21 0.9171 0.00064531 0.21557 0.00015168 1.1327 0.000797 703.975135639504 707.312089648812 49.929 0.51034 49.929 49.728 50.238 -3.8147E-06 259 44 8 0 0 0 3.1479E-06 1 28104 70.555 70.555 1 1.6681 1.8931 0 48514000 18831000 29683000 7576 486 2884 2959 11811 11811 330 EFSGHQGQINDMAFSPDGR 19 0 1 Oxidation (M) _EFSGHQGQINDM(ox)AFSPDGR_ EFSGHQGQINDM(1)AFSPDGR EFSGHQGQINDM(51.17)AFSPDGR 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.9757 3 703.641198 2107.90177 72414.09 0.71441 0.00050269 -0.42359 -0.00029805 0.29082 0.00020464 703.974888629175 706.977376818944 50.393 0.51524 50.393 50.174 50.69 0 274 48 7 0 0 0 9.917E-06 2 28392 51.166 51.166 1 1.2463 1.4184 0 49288000 21956000 27332000 7577 486 2884 2959 11812;11813 11813 330 EFSGHQGQINDMAFSPDGR 19 0 1 Unmodified _EFSGHQGQINDMAFSPDGR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.8799 3 698.30956 2091.90685 71922.15 0.479 0.00033449 -0.028749 -2.0076E-05 0.45025 0.00031441 698.644434288027 701.979487150384 76.446 0.41019 76.446 76.239 76.65 0 128 31 6 0 0 0 0.0017378 1 40784 45.916 45.916 1 1.4332 1.2219 0 2807200 951700 1855500 7578 486 2884 2960 11814 11814 EFSIIEHTR 9 0 1 Unmodified _EFSIIEHTR_ 0 0 0 Q8NG31;E9PPJ1;Q05C46 Q8NG31;Q05C46 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 377.8646 3 377.864617 1130.57202 99403.29 0.47716 0.0001803 0.30747 0.00011618 0.78464 0.00029649 377.864560886141 381.200716072372 48.415 0.32507 48.415 48.288 48.613 3.8147E-06 65 21 4 0 0 0 0.0057467 1 27089 45.161 37.515 1 0.79959 0.80114 0 6806200 3193800 3612300 7579 1928;1685 2885 2961 11815 11815 EFSITDVVPYPISLR 15 0 1 Unmodified _EFSITDVVPYPISLR_ 0 0 0 O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;B4DT47;B4DIZ3;B4DUS3;B4E354;B4E0H6 O14992 O14992 HS24/p52;HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.4675 2 868.466895 1734.91924 67994.12 1.0298 0.00089437 0.012458 1.0819E-05 1.0423 0.00090519 868.968443019001 873.470859650138 131.34 0.37543 131.34 131.14 131.51 0 86 25 5 0 0 0 0.023377 1 85672 29.936 24.09 1 1.617 1.6042 0 8322600 3523100 4799500 7580 404 2886 2962 11816 11816 EFSITDVVPYPISLR 15 0 1 Unmodified _EFSITDVVPYPISLR_ 0 0 0 O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;B4DT47;B4DIZ3;B4DUS3;B4E354;B4E0H6 O14992 O14992 HS24/p52;HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.4733 2 868.466895 1734.91924 66230.52 0.78891 0.00068515 0.67459 0.00058586 1.4635 0.001271 868.46728945245 873.471682071567 130.92 0.41354 130.92 130.7 131.11 0 109 30 5 0 0 0 4.0894E-05 2 87498 86.014 80.291 1 1.7885 1.8061 0 5594800 1739000 3855700 7581 404 2886 2962 11817;11818 11817 EFSPFGSITSAK 12 1 0 Unmodified _EFSPFGSITSAK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.8274 2 635.819335 1269.62412 75947.57 0.94701 0.00060213 -0.16443 -0.00010455 0.78257 0.00049758 635.81914611646 639.826466551105 91.321 0.73897 91.321 90.945 91.684 0 241 59 7 0 0 0 0.00093495 1 55175 63.624 51.097 1 2.2636 2.4434 0 42000000 12494000 29506000 7582 818 2887 2963 11819 11819 EFSPFGSITSAK 12 1 0 Unmodified _EFSPFGSITSAK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8272 2 635.819335 1269.62412 76186.87 1.0861 0.00069057 -0.20503 -0.00013036 0.88108 0.00056021 635.81935774829 639.826615865223 90.441 0.73653 90.441 90.075 90.812 0 364 61 9 0 0 0 0.00020181 2 55783 89.827 79.561 1 2.245 2.4732 0 43204000 12643000 30561000 7583 818 2887 2963 11820;11821 11820 EFSPFGSITSAK 12 1 0 Unmodified _EFSPFGSITSAK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.8276 2 635.819335 1269.62412 76347.98 0.5641 0.00035867 0.23025 0.0001464 0.79435 0.00050506 635.819313961991 639.826093732749 104.12 0.83678 104.12 103.88 104.72 0 189 53 6 0 0 0 0.037464 1 59213 34.695 29.912 1 1.5685 1.2406 0 4155600 1608200 2547400 7584 818 2887 2963 11822 11822 EFSPFGSITSAK 12 1 0 Unmodified _EFSPFGSITSAK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.8267 2 635.819335 1269.62412 77715.84 0.4365 0.00027754 0.54831 0.00034862 0.98481 0.00062616 635.819481678712 639.826815158312 103.9 0.56429 103.9 103.71 104.27 -7.6294E-06 158 37 6 0 0 0 0.019325 1 58204 40.154 39.803 1 1.4887 1.2131 0 4609600 1825100 2784500 7585 818 2887 2963 11823 11823 EFSPFGTITSAK 12 1 0 Unmodified _EFSPFGTITSAK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;H0YAP2;H0YB86 A0A087WTT1 A0A087WTT1 PABPC1 Polyadenylate-binding protein;Polyadenylate-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.8355 2 642.82716 1283.63977 NaN NaN NaN 0.25176 0.00016184 NaN NaN NaN NaN 92.16 0.81543 92.16 91.959 92.774 0 0 0 0 0.00091074 1 55840 83.869 75.648 1 NaN NaN 0 23593000 0 23593000 7586 273 2888 2964 11824 11824 EFSTNNPFK 9 1 0 Unmodified _EFSTNNPFK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;F5H6N4;Q05CG6 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2659 2 542.258914 1082.50327 83000.39 0.68944 0.00037386 -0.0024746 -1.3419E-06 0.68697 0.00037251 542.259009908807 546.265685812776 57.903 1.0844 57.903 57.52 58.605 0 371 86 7 0 0 0 0.0011603 2 32596 89.142 89.142 1 0.69958 0.78996 0 80794000 48155000 32639000 7587 515 2889 2965 11825;11826 11826 EFSTNNPFK 9 1 0 Unmodified _EFSTNNPFK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;F5H6N4;Q05CG6 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.2651 2 542.258914 1082.50327 83056.11 0.5986 0.0003246 -0.087116 -4.7239E-05 0.51148 0.00027736 542.258978996156 546.265509013969 56.929 1.0889 56.929 56.526 57.615 0 373 84 7 0 0 0 6.7674E-08 3 32754 143.11 143.11 1 0.71433 0.79814 0 88671000 55178000 33492000 7588 515 2889 2965 11827;11828;11829 11828 EFSTNNPFK 9 1 0 Unmodified _EFSTNNPFK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;F5H6N4;Q05CG6 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.2592 2 542.258914 1082.50327 83256.12 0.64813 0.00035145 -0.13155 -7.1337E-05 0.51657 0.00028012 542.258828846875 546.265780759182 67.011 1.1571 67.011 66.634 67.791 0 324 81 6 0 0 0 0.018064 2 34754 52.403 52.403 1 1.8403 1.46 0 10214000 3704800 6508900 7589 515 2889 2965 11830;11831 11831 EFSTNNPFK 9 1 0 Unmodified _EFSTNNPFK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;F5H6N4;Q05CG6 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.266 2 542.258914 1082.50327 83242.55 0.45025 0.00024415 -0.05197 -2.8181E-05 0.39828 0.00021597 542.258929758811 546.265805771033 67.518 1.0508 67.518 67.132 68.183 0 290 71 6 0 0 0 0.020055 2 34399 50.607 50.607 1 1.7456 1.4233 0 7711200 2739900 4971300 7590 515 2889 2965 11832;11833 11833 EFTDLLAQDR 10 0 1 Unmodified _EFTDLLAQDR_ 0 0 0 Q96SH1;P05549;A8K557;Q92481;B2R9E2 Q96SH1 Q96SH1 TFAP2A;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.3021 2 604.30131 1206.58807 78751.45 0.84627 0.0005114 0.27152 0.00016408 1.1178 0.00067548 604.301205607624 609.305564388374 84.098 0.44687 84.098 83.823 84.269 0 141 37 5 0 0 0 0.0037552 1 51637 63.076 31.141 1 0.57314 0.56769 0 15574000 9128300 6445900 7591 1448 2890 2966 11834 11834 EFTDLLAQDR 10 0 1 Unmodified _EFTDLLAQDR_ 0 0 0 Q96SH1;P05549;A8K557;Q92481;B2R9E2 Q96SH1 Q96SH1 TFAP2A;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 609.3059 2 604.30131 1206.58807 77014.92 0.772 0.00046652 0.24996 0.00015105 1.022 0.00061757 604.301048679973 609.305549125673 96.453 0.60485 96.453 96.129 96.734 0 119 36 5 0 0 0 0.010196 1 54054 53.683 24.596 1 1.2028 1.0057 0 3675600 1727600 1948000 7592 1448 2890 2966 11835 11835 EFTDLLAQDR 10 0 1 Unmodified _EFTDLLAQDR_ 0 0 0 Q96SH1;P05549;A8K557;Q92481;B2R9E2 Q96SH1 Q96SH1 TFAP2A;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.3073 2 604.30131 1206.58807 79108.45 0.38721 0.00023399 0.49698 0.00030032 0.88419 0.00053432 604.301135697652 609.305734325394 96.427 0.59531 96.427 96.13 96.726 0 119 34 5 0 0 0 0.028233 1 53193 43.512 21.275 1 1.2011 1.057 0 2483500 1246600 1237000 7593 1448 2890 2966 11836 11836 EFTEAVEAK 9 1 0 Unmodified _EFTEAVEAK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;A8K9G2 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2532 2 512.253297 1022.49204 85398.82 0.52779 0.00027036 -0.091451 -4.6846E-05 0.43634 0.00022352 512.253191452337 516.260185551089 36.402 0.90017 36.402 35.949 36.849 0 438 84 9 0 0 0 0.00033904 2 18368 101.54 71.357 1 1.6227 1.8725 0 218860000 91061000 127790000 7594 730 2891 2967 11837;11838 11838 EFTEAVEAK 9 1 0 Unmodified _EFTEAVEAK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;A8K9G2 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.2612 2 512.253297 1022.49204 85482.59 1.1759 0.00060236 0.16649 8.5286E-05 1.3424 0.00068765 512.253193194643 516.260335889826 35.614 1.1034 35.614 34.988 36.092 0 546 97 10 0 0 0 0.0036023 1 17953 71.379 50.079 1 1.5549 1.7729 0 151750000 58020000 93733000 7595 730 2891 2967 11839 11839 EFTEAVEAK 9 1 0 Unmodified _EFTEAVEAK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;A8K9G2 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.2603 2 512.253297 1022.49204 85158.08 0.30801 0.00015778 0.090758 4.6491E-05 0.39877 0.00020427 512.253277278036 516.260305822826 41.265 1.0423 41.265 40.954 41.996 0 401 80 9 0 0 0 0.0018198 1 19038 80.438 62.453 1 3.0371 2.3963 0 17850000 4472200 13378000 7596 730 2891 2967 11840 11840 EFTEAVEAK 9 1 0 Unmodified _EFTEAVEAK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;A8K9G2 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.2536 2 512.253297 1022.49204 84837.3 0.069771 3.574E-05 0.32977 0.00016893 0.39955 0.00020467 512.253378117014 516.260500237588 41.417 1.0235 41.417 40.992 42.015 0 334 80 9 0 0 0 0.0017345 2 18686 81.548 55.811 1 2.8005 2.2488 0 14671000 3740000 10931000 7597 730 2891 2967 11841;11842 11842 EFTNFLDTIIR 11 0 1 Unmodified _EFTNFLDTIIR_ 0 0 0 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8662 2 684.861534 1367.70852 74450.6 0.87987 0.00060259 -0.09425 -6.4548E-05 0.78562 0.00053804 684.861443652119 689.865489734864 126.01 0.55347 126.01 125.74 126.29 7.6294E-06 197 40 7 0 0 0 2.7331E-05 2 81864 102.06 102.06 1 0.66878 0.68483 0 10048000 5991000 4056600 7598 360 2892 2968 11843;11844 11843 EFTNFLDTIIR 11 0 1 Unmodified _EFTNFLDTIIR_ 0 0 0 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.8616 2 684.861534 1367.70852 74806 0.87143 0.00059681 -0.12717 -8.7092E-05 0.74426 0.00050972 684.861310049375 689.865534544241 125.55 0.52499 125.55 125.28 125.81 0 191 35 8 0 0 0 0.00036136 2 83649 102.07 102.07 1 0.69439 0.69651 0 11260000 6497100 4762500 7599 360 2892 2968 11845;11846 11846 EFTNHWWNELFNK 13 1 0 Unmodified _EFTNHWWNELFNK_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 591.6156 3 588.942478 1763.8056 80021.17 0.76692 0.00045167 -0.11416 -6.7236E-05 0.65275 0.00038443 589.27652721852 591.613992384102 121.68 0.53386 121.68 121.48 122.02 7.6294E-06 107 27 7 0 0 0 0.050594 1 72465 18.596 18.15 1 1.9096 1.4937 0 3229400 1206500 2022900 7600 1820 2893 2969 11847 11847 EFTNVYIK 8 1 0 Unmodified _EFTNVYIK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;H0YBN4;B1ANR0;Q6IQ30;Q13310;H0Y5F5;H0YCC8 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.2762 2 507.26875 1012.52295 87087.77 0.40109 0.00020346 0.4002 0.00020301 0.80129 0.00040647 507.268664441371 511.276082568666 64.193 1.4324 64.193 63.546 64.978 0 409 131 5 0 0 0 0.011407 2 37053 69.998 51.268 1 2.499 2.7096 0 44743000 14859000 29883000 7601 273;818 2894 2970 11848;11849 11849 EFTPYDYSQSDFK 13 1 0 Unmodified _EFTPYDYSQSDFK_ 0 0 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.3638 2 813.851561 1625.68857 68215.48 0.55264 0.00044976 0.29565 0.00024062 0.84829 0.00069038 813.851755859385 817.858937563818 81.623 0.61969 81.623 81.346 81.966 0 215 53 7 0 0 0 0.020752 1 48621 35.594 35.594 1 0.87768 0.8638 0 23978000 12754000 11225000 7602 1676 2895 2971 11850 11850 EFTPYDYSQSDFK 13 1 0 Unmodified _EFTPYDYSQSDFK_ 0 0 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.8594 2 813.851561 1625.68857 68800.94 0.68811 0.00056002 0.3343 0.00027207 1.0224 0.00083208 813.851779612038 818.360140090171 80.711 0.60955 80.711 80.491 81.101 -7.6294E-06 198 49 6 0 0 0 0.00014459 3 49242 87.568 87.568 1 0.88298 0.92561 0 19495000 10679000 8815300 7603 1676 2895 2971 11851;11852;11853 11852 EFTPYDYSQSDFK 13 1 0 Unmodified _EFTPYDYSQSDFK_ 0 0 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 817.8593 2 813.851561 1625.68857 68440.38 0.66933 0.00054474 0.65225 0.00053083 1.3216 0.0010756 813.852133948228 817.859154631301 93.263 0.67302 93.263 93.058 93.731 7.6294E-06 239 41 8 0 0 0 0.0081175 1 52095 44.299 44.299 1 1.0243 0.821 0 8356900 3712900 4643900 7604 1676 2895 2971 11854 11854 EFTVNIMDTCER 12 0 1 Oxidation (M) _EFTVNIM(ox)DTCER_ EFTVNIM(1)DTCER EFTVNIM(73.5)DTCER 0 1 0 Q59E88;Q53G26;Q96EY1;B3KM81;I3L1T6 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.8375 2 765.831791 1529.64903 NaN NaN NaN -2.0997 -0.001608 NaN NaN NaN NaN 71.445 0.39198 71.445 71.251 71.643 0 0 0 0 0.00057234 2 42794 73.499 63.213 1 NaN NaN 0 8916700 0 8916700 7605 1786 2896 2972 11855;11856 11855 1652 EFVDYYYSTNR 11 0 1 Unmodified _EFVDYYYSTNR_ 0 0 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.8228 2 728.822606 1455.63066 72145.3 0.57223 0.00041706 0.45724 0.00033324 1.0295 0.0007503 728.822535727818 733.827273758718 82.762 0.54809 82.762 82.507 83.055 0 126 34 5 0 0 0 0.060689 1 45049 33.229 28.93 1 1.8164 1.5935 0 1684200 682870 1001300 7606 1400 2897 2973 11857 11857 EFVDYYYSTNR 11 0 1 Unmodified _EFVDYYYSTNR_ 0 0 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.8244 2 728.822606 1455.63066 72026.26 0.62146 0.00045294 0.22666 0.00016519 0.84812 0.00061813 728.822677120141 733.827051525416 83.037 0.541 83.037 82.787 83.328 0 94 30 5 0 0 0 0.05005 1 44342 34.692 30.394 1 1.7007 1.4876 0 1386900 638740 748140 7607 1400 2897 2973 11858 11858 EFVEAVLELR 10 0 1 Unmodified _EFVEAVLELR_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.8369 2 602.832246 1203.64994 77978.28 0.93637 0.00056447 0.091697 5.5278E-05 1.0281 0.00061975 602.832324462066 607.836360619439 111.76 1.5222 111.76 111.46 112.98 0 696 110 10 0 0 0 3.6561E-12 4 70376 146.23 146.23 1 1.0345 1.2291 0 1005400000 485810000 519620000 7608 1401 2898 2974 11859;11860;11861;11862 11860 EFVEAVLELR 10 0 1 Unmodified _EFVEAVLELR_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.8365 2 602.832246 1203.64994 77848.32 0.6823 0.00041131 0.058411 3.5212E-05 0.74071 0.00044652 602.832278879039 607.836333019011 111.17 2.0458 111.17 110.84 112.88 -7.6294E-06 819 143 10 0 0 0 2.7898E-09 4 71628 126.07 126.07 1 1.0738 1.254 0 548080000 259790000 288290000 7609 1401 2898 2974 11863;11864;11865;11866 11864 EFVEAVLELR 10 0 1 Unmodified _EFVEAVLELR_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8326 2 602.832246 1203.64994 78231.23 0.81821 0.00049324 0.031849 1.92E-05 0.85006 0.00051244 602.832343669491 607.836293869825 122.9 2.5652 122.9 122.41 124.97 7.6294E-06 482 114 10 0 0 0 8.2707E-12 3 73258 140.75 140.75 1 1.116 0.96757 0 175080000 81884000 93196000 7610 1401 2898 2974 11867;11868;11869 11867 EFVEAVLELR 10 0 1 Unmodified _EFVEAVLELR_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.8326 2 602.832246 1203.64994 78623.1 0.87072 0.0005249 -0.068264 -4.1152E-05 0.80246 0.00048375 602.832234123505 607.836223084698 122.73 1.9045 122.73 122.12 124.03 -7.6294E-06 445 87 11 0 0 0 2.8407E-12 3 72232 147.2 132.26 1 1.1298 0.98632 0 113230000 53995000 59235000 7611 1401 2898 2974 11870;11871;11872 11871 EFVEAVLELRK 11 1 1 Unmodified _EFVEAVLELRK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.3917 2 666.879727 1331.7449 74061.05 0.61208 0.00040818 -0.64838 -0.00043239 -0.036308 -2.4213E-05 666.879422916761 675.890367759 104.25 0.88949 104.25 103.87 104.75 0 221 56 5 0 0 0 0.00041651 3 59225 90.696 85.493 1 1.2909 1.1014 0 9742200 4000800 5741400 7612 1401 2899 2975 11873;11874;11875 11873 EFVEAVLELRK 11 1 1 Unmodified _EFVEAVLELRK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.8906 2 666.879727 1331.7449 73920.59 0.42416 0.00028286 -0.65446 -0.00043645 -0.2303 -0.00015358 666.879389254915 675.890405044766 103.94 0.86929 103.94 103.6 104.47 0 216 53 5 0 0 0 0.034257 1 58215 43.77 39.157 1 1.371 1.1562 0 8614500 3713500 4901000 7613 1401 2899 2975 11876 11876 EFVLPFLR 8 0 1 Unmodified _EFVLPFLR_ 0 0 0 Q9HBB9;Q8WUM5;Q9HC39;I3L2C7;P57678 Q9HBB9 Q9HBB9 GEMIN4 Gem-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.8024 2 510.797478 1019.5804 89365.21 0.63723 0.0003255 0.15314 7.8224E-05 0.79037 0.00040372 510.798098860907 515.801464837939 123.96 0.52777 123.96 123.73 124.26 7.6294E-06 141 36 7 0 0 0 0.0067093 1 80333 86.086 86.086 1 2.6146 2.6637 0 6973800 2222800 4751000 7614 1940 2900 2976 11877 11877 EFVLPFLR 8 0 1 Unmodified _EFVLPFLR_ 0 0 0 Q9HBB9;Q8WUM5;Q9HC39;I3L2C7;P57678 Q9HBB9 Q9HBB9 GEMIN4 Gem-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.8018 2 510.797478 1019.5804 84478.26 0.5892 0.00030096 0.30591 0.00015626 0.89511 0.00045722 510.798100564277 515.801477566829 123.45 0.53873 123.45 123.2 123.74 -7.6294E-06 155 39 6 0 0 0 0.010438 1 81869 72.234 62.763 1 2.2981 2.2867 0 8146200 2664700 5481500 7615 1940 2900 2976 11878 11878 EFVSASFDK 9 1 0 Unmodified _EFVSASFDK_ 0 0 0 A0A087WT20;Q9NV06;A0A087X1F8 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.2555 2 515.248015 1028.48148 85665.04 0.33972 0.00017504 0.49304 0.00025404 0.83276 0.00042908 515.248318681132 519.25516781799 58.174 0.97565 58.174 57.865 58.841 3.8147E-06 318 78 6 0 0 0 0.0012677 2 32866 87.639 65.403 1 1.0594 1.1511 0 47016000 22144000 24872000 7616 402 2901 2977 11879;11880 11879 EFVSASFDK 9 1 0 Unmodified _EFVSASFDK_ 0 0 0 A0A087WT20;Q9NV06;A0A087X1F8 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.2486 2 515.248015 1028.48148 86499.05 0.2966 0.00015283 0.39855 0.00020535 0.69516 0.00035818 515.248160254562 519.255159613269 57.252 0.80231 57.252 56.962 57.764 0 285 61 6 0 0 0 0.0049289 1 33032 68.016 37.849 1 0.97991 1.0854 0 46438000 21771000 24668000 7617 402 2901 2977 11881 11881 EFVSASFDK 9 1 0 Unmodified _EFVSASFDK_ 0 0 0 A0A087WT20;Q9NV06;A0A087X1F8 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.2551 2 515.248015 1028.48148 84380.51 0.21351 0.00011001 0.35111 0.00018091 0.56462 0.00029092 515.248194218144 519.255139305928 67.715 1.0258 67.715 67.324 68.35 0 313 73 6 0 0 0 0.0021558 2 34428 76.064 59.731 1 1.4377 1.1722 0 6518700 2603200 3915500 7618 402 2901 2977 11882;11883 11882 EFVSSDESSSGENK 14 1 0 Unmodified _EFVSSDESSSGENK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.8273 2 751.318082 1500.62161 NaN NaN NaN 0.16381 0.00012308 NaN NaN NaN NaN 22.441 0.29724 22.441 22.263 22.56 0 0 0 0 1.4416E-09 1 8490 108.35 87.478 1 NaN NaN 0 4526700 0 4526700 7619 167 2902 2978 11884 11884 EFYGENIK 8 1 0 Unmodified _EFYGENIK_ 0 0 0 J3QRD1;Q59H65;P51648;Q68D64;J3QS00;I3L1M4 J3QRD1 J3QRD1 ALDH3A2;DKFZp686E23276 Fatty aldehyde dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.2506 2 500.242732 998.470912 86369.98 0.55538 0.00027783 -0.40963 -0.00020491 0.14575 7.2913E-05 500.242863094451 504.249442003014 45.332 0.53161 45.332 45.069 45.6 0 98 46 5 0 0 0 0.023396 1 24414 56.547 39.254 1 1.1975 1.2528 0 11989000 4886500 7102200 7620 1338 2903 2979 11885 11885 EGAFSNFPISEETIK 15 1 0 Unmodified _EGAFSNFPISEETIK_ 0 0 0 Q9NR30;B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q53FI9 Q9NR30;B4DW97 Q9NR30 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.9161 2 834.90941 1667.80427 65814.55 1.0214 0.00085278 0.27306 0.00022798 1.2945 0.0010808 834.90993686081 838.916501106643 102.07 1.5231 102.07 101.26 102.78 7.6294E-06 680 122 10 0 0 0 3.5639E-10 2 62574 116.03 116.03 1 1.137 1.3199 0 245650000 112780000 132870000 7621 2065;416 2904 2980 11886;11887 11886 EGAFSNFPISEETIK 15 1 0 Unmodified _EGAFSNFPISEETIK_ 0 0 0 Q9NR30;B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q53FI9 Q9NR30;B4DW97 Q9NR30 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.9103 2 834.90941 1667.80427 65918.23 0.81945 0.00068416 0.23858 0.0001992 1.058 0.00088336 834.909711613758 838.916396649273 101.34 1.2206 101.34 100.76 101.99 -7.6294E-06 657 96 11 0 0 0 0.00055387 2 63800 71.176 71.176 1 1.1577 1.3474 0 241670000 116020000 125650000 7622 2065;416 2904 2980 11888;11889 11889 EGAFSNFPISEETIK 15 1 0 Unmodified _EGAFSNFPISEETIK_ 0 0 0 Q9NR30;B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q53FI9 Q9NR30;B4DW97 Q9NR30 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 838.9167 2 834.90941 1667.80427 66162.75 0.94066 0.00078536 -0.43419 -0.00036251 0.50647 0.00042285 834.909250085568 838.916053769453 114.09 0.97105 114.09 113.81 114.78 7.6294E-06 318 42 14 0 0 0 0.001486 2 66445 59.155 59.155 1 1.2323 1.074 0 158830000 68988000 89839000 7623 2065;416 2904 2980 11890;11891 11890 EGAFSNFPISEETIK 15 1 0 Unmodified _EGAFSNFPISEETIK_ 0 0 0 Q9NR30;B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q53FI9 Q9NR30;B4DW97 Q9NR30 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.9163 2 834.90941 1667.80427 65644.5 0.74029 0.00061807 -0.068938 -5.7557E-05 0.67135 0.00056051 834.909498581266 838.916307239914 114.01 1.0059 114.01 113.69 114.69 -7.6294E-06 305 43 12 0 0 0 3.4077E-06 2 65455 97.957 97.957 1 1.2448 1.0681 0 139830000 65031000 74801000 7624 2065;416 2904 2980 11892;11893 11892 EGATVYATGTHAQVEDGR 18 0 1 Unmodified _EGATVYATGTHAQVEDGR_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;J3QKT4;E2QRB3;E7D7Y0;A0A1B2JLU7;B7Z8T1;J3KQ22;J3QL24;J3QR88;J3QLK9;J3QL23;J3QL32 Q2TU78 Q2TU78 PIG45;PYCR1 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.6303 3 621.294016 1860.86022 76242.23 0.56573 0.00035149 0.18849 0.00011711 0.75422 0.00046859 621.294603187301 624.630249387758 31.82 0.27528 31.82 31.681 31.957 -1.9073E-06 88 26 4 0 0 0 0.00063083 1 15701 36.112 36.112 1 0.64204 0.64964 0 15285000 8221100 7064000 7625 259 2905 2981 11894 11894 EGATVYATGTHAQVEDGR 18 0 1 Unmodified _EGATVYATGTHAQVEDGR_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;J3QKT4;E2QRB3;E7D7Y0;A0A1B2JLU7;B7Z8T1;J3KQ22;J3QL24;J3QR88;J3QLK9;J3QL23;J3QL32 Q2TU78 Q2TU78 PIG45;PYCR1 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.436 2 931.437386 1860.86022 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.792 1 31.792 31.292 32.292 0 0 0 0 9.6756E-05 1 15707 67.997 53.839 1 7626 259 2905 2981 11895 11895 EGATVYATGTHAQVEDGR 18 0 1 Unmodified _EGATVYATGTHAQVEDGR_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;J3QKT4;E2QRB3;E7D7Y0;A0A1B2JLU7;B7Z8T1;J3KQ22;J3QL24;J3QR88;J3QLK9;J3QL23;J3QL32 Q2TU78 Q2TU78 PIG45;PYCR1 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.965 3 621.294016 1860.86022 77402.59 0.34909 0.00021688 0.2846 0.00017682 0.63369 0.00039371 621.294564545337 624.63032545448 31.094 0.35853 31.094 30.927 31.286 1.9073E-06 102 30 6 0 0 0 1.0253E-05 1 15328 64.2 64.2 1 0.69433 0.6827 0 14325000 8700800 5623800 7627 259 2905 2981 11896 11896 EGATVYATGTHAQVEDGR 18 0 1 Unmodified _EGATVYATGTHAQVEDGR_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;J3QKT4;E2QRB3;E7D7Y0;A0A1B2JLU7;B7Z8T1;J3KQ22;J3QL24;J3QR88;J3QLK9;J3QL23;J3QL32 Q2TU78 Q2TU78 PIG45;PYCR1 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.9402 2 931.437386 1860.86022 NaN NaN NaN 0.42127 0.00039238 NaN NaN NaN NaN 31.029 0.13188 31.029 30.988 31.12 0 0 0 0 0.004841 1 15292 46.481 32.575 1 NaN NaN 0 3043700 3043700 0 7628 259 2905 2981 11897 11897 EGATVYATGTHAQVEDGR 18 0 1 Unmodified _EGATVYATGTHAQVEDGR_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;J3QKT4;E2QRB3;E7D7Y0;A0A1B2JLU7;B7Z8T1;J3KQ22;J3QL24;J3QR88;J3QLK9;J3QL23;J3QL32 Q2TU78 Q2TU78 PIG45;PYCR1 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.2949 3 621.294016 1860.86022 77957.34 0.32077 0.00019929 -0.015568 -9.6726E-06 0.3052 0.00018962 621.294106777451 624.630062880042 37.121 0.40846 37.121 36.962 37.371 0 163 35 8 0 0 0 0.033271 2 16199 17.361 13.457 1 0.30168 0.26636 0 3666600 2574600 1092000 7629 259 2905 2981 11898;11899 11898 EGDAHPLGALPVGTLINNVESEPGR 25 0 1 Unmodified _EGDAHPLGALPVGTLINNVESEPGR_ 0 0 0 C9IY40;Q5T653;A0A024RD44 C9IY40 C9IY40 MRPL2 39S ribosomal protein L2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 851.7718 3 848.101386 2541.28233 67307.63 1.0377 0.00088004 -0.48545 -0.00041171 0.55221 0.00046833 848.434995274262 851.771365626019 111.85 0.41325 111.85 111.62 112.03 0 138 29 8 0 0 0 9.8761E-07 1 72220 47.728 47.728 1 0.99941 0.98666 0 14922000 6708000 8213900 7630 1125 2906 2982 11900 11900 EGDAHPLGALPVGTLINNVESEPGR 25 0 1 Unmodified _EGDAHPLGALPVGTLINNVESEPGR_ 0 0 0 C9IY40;Q5T653;A0A024RD44 C9IY40 C9IY40 MRPL2 39S ribosomal protein L2, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.4337 3 848.101386 2541.28233 66145.84 0.97227 0.00082458 -0.91675 -0.0007775 0.055516 4.7083E-05 848.434248809571 851.77162083839 123.16 0.38448 123.16 122.97 123.35 0 73 17 8 0 0 0 0.031068 1 73608 14.852 12.09 1 1.0056 0.84088 0 3772200 1874900 1897300 7631 1125 2906 2982 11901 11901 EGDAHPLGALPVGTLINNVESEPGR 25 0 1 Unmodified _EGDAHPLGALPVGTLINNVESEPGR_ 0 0 0 C9IY40;Q5T653;A0A024RD44 C9IY40 C9IY40 MRPL2 39S ribosomal protein L2, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 851.7722 3 848.101386 2541.28233 65990.49 0.91664 0.00077741 -0.66144 -0.00056097 0.25521 0.00021644 848.433950086308 851.771556182043 122.95 0.55183 122.95 122.59 123.14 0 90 26 8 0 0 0 0.020395 2 72523 18.212 18.212 1 1.3584 1.1294 0 6037300 2574700 3462700 7632 1125 2906 2982 11902;11903 11902 EGDDYEVIPN 10 0 0 Unmodified _EGDDYEVIPN_ 0 0 0 C9JJ64 C9JJ64 C9JJ64 SMC4 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1150.4913 1 1150.48987 1149.4826 NaN NaN NaN 0.22712 0.0002613 NaN NaN NaN NaN 77.638 0.51313 77.638 77.445 77.958 0 0 0 0 5.4937E-05 1 47055 102.72 87.943 1 7633 1136 2907 2983 11904 11904 EGDDYEVIPNSNFYVSR 17 0 1 Unmodified _EGDDYEVIPNSNFYVSR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1007.9582 2 1002.4527 2002.89085 61267.2 0.67752 0.00067918 -0.0051178 -5.1304E-06 0.6724 0.00067405 1002.95415554332 1007.45683185159 98.686 0.99869 98.686 98.241 99.24 0 544 81 10 0 0 0 3.8489E-05 4 60097 80.014 75.257 1 0.8227 0.95989 0 195490000 103240000 92249000 7634 2070 2908 2984 11905;11906;11907;11908 11907 EGDDYEVIPNSNFYVSR 17 0 1 Unmodified _EGDDYEVIPNSNFYVSR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1007.9579 2 1002.4527 2002.89085 61054.79 0.50313 0.00050436 -0.044299 -4.4407E-05 0.45883 0.00045995 1002.95411784334 1007.45686403216 98.085 0.89301 98.085 97.7 98.593 0 573 77 10 0 0 0 6.8066E-08 3 61127 99.5 91.368 1 0.81779 0.94115 0 211210000 123080000 88126000 7635 2070 2908 2984 11909;11910;11911 11911 EGDDYEVIPNSNFYVSR 17 0 1 Unmodified _EGDDYEVIPNSNFYVSR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1002.9541 2 1002.4527 2002.89085 60683.45 0.5175 0.00051877 -0.032314 -3.2393E-05 0.48519 0.00048638 1002.95432352729 1007.45681761779 111.08 0.84679 111.08 110.79 111.64 0 286 38 12 0 0 0 7.8626E-07 2 64186 92.925 79.945 1 1.7444 1.5082 0 112400000 41673000 70729000 7636 2070 2908 2984 11912;11913 11913 EGDDYEVIPNSNFYVSR 17 0 1 Unmodified _EGDDYEVIPNSNFYVSR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1007.9589 2 1002.4527 2002.89085 61034.17 0.29906 0.00029979 -0.01671 -1.6751E-05 0.28235 0.00028304 1002.95429116093 1007.45689423597 111.18 0.93188 111.18 110.76 111.7 -7.6294E-06 336 49 12 0 0 0 7.0985E-06 1 63249 86.288 78.563 1 1.6666 1.4549 0 110420000 41037000 69380000 7637 2070 2908 2984 11914 11914 EGDETPNSIPADIVFIIK 18 1 0 Unmodified _EGDETPNSIPADIVFIIK_ 0 0 0 B4DNN2;Q59E89;Q9UDY4 B4DNN2 B4DNN2 DNAJB4 DnaJ homolog subfamily B member 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 983.5139 2 979.509488 1957.00442 NaN NaN NaN -1.3609 -0.001333 NaN NaN NaN NaN 128.88 0.2059 128.88 128.8 129 0 0 0 0 2.0334E-09 1 86074 88.163 75.997 1 NaN NaN 0 11944000 0 11944000 7638 1013 2909 2985 11915 11915 EGDFNNLTAAAFHK 14 1 0 Unmodified _EGDFNNLTAAAFHK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.9175 3 512.247678 1533.72121 82808.74 0.51352 0.00026305 -0.71753 -0.00036755 -0.20401 -0.00010451 512.247713745927 514.918261005277 73.991 0.65857 73.991 73.7 74.359 0 289 58 6 0 0 0 0.0055544 2 43290 29.139 29.139 1 0.93556 1.0187 0 49249000 26147000 23102000 7639 1756 2910 2986 11916;11917 11917 EGDFNNLTAAAFHK 14 1 0 Unmodified _EGDFNNLTAAAFHK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.8669 2 767.867879 1533.72121 69524.49 0.68053 0.00052256 0.33967 0.00026083 1.0202 0.00078338 767.867412302575 771.875707380313 74.045 0.2718 74.045 73.94 74.212 0 85 25 5 0 0 0 0.001402 2 43450 66.758 62.062 1 1.0062 1.0413 0 11146000 7293900 3852400 7640 1756 2910 2986 11918;11919 11919 EGDFNNLTAAAFHK 14 1 0 Unmodified _EGDFNNLTAAAFHK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.9188 3 512.247678 1533.72121 82092.66 0.43747 0.00022409 -0.80692 -0.00041334 -0.36945 -0.00018925 512.247717070698 514.918326219928 72.703 0.65176 72.703 72.377 73.028 0 281 56 6 0 0 0 0.0022276 1 43524 28.727 28.727 1 0.98813 1.1071 0 54446000 27684000 26763000 7641 1756 2910 2986 11920 11920 EGDFNNLTAAAFHK 14 1 0 Unmodified _EGDFNNLTAAAFHK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.3759 2 767.867879 1533.72121 69147.85 0.58575 0.00044978 0.0040633 3.1201E-06 0.58981 0.0004529 767.868243000223 771.875437920422 84.333 0.52605 84.333 84.106 84.632 0 182 41 8 0 0 0 0.028752 1 45957 31.478 30.788 1 1.1686 0.93594 0 8517700 3805400 4712300 7642 1756 2910 2986 11921 11921 EGDFNNLTAAAFHK 14 1 0 Unmodified _EGDFNNLTAAAFHK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 771.8755 2 767.867879 1533.72121 69961.13 0.87773 0.00067398 0.21179 0.00016263 1.0895 0.00083661 767.868253897566 771.875039469693 84.385 0.42873 84.385 84.153 84.582 7.6294E-06 131 31 7 0 0 0 0.0088554 1 45188 37.995 35.951 1 1.2374 1.0085 0 6627700 3338900 3288700 7643 1756 2910 2986 11922 11922 EGDGVYYNELETR 13 0 1 Unmodified _EGDGVYYNELETR_ 0 0 0 A0A024R0H6;Q8N7H5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.8539 2 772.84681 1543.67907 69360.93 0.54794 0.00042348 0.34756 0.00026861 0.8955 0.00069209 772.84696109703 777.851222437651 64.482 0.83497 64.482 64.034 64.869 0 386 72 7 0 0 0 0.00013248 3 36794 73.781 66.136 1 1.5966 1.6333 0 34360000 12194000 22166000 7644 46 2911 2987 11923;11924;11925 11923 EGDGVYYNELETR 13 0 1 Unmodified _EGDGVYYNELETR_ 0 0 0 A0A024R0H6;Q8N7H5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.3529 2 772.84681 1543.67907 69019.22 0.6944 0.00053666 0.045567 3.5217E-05 0.73997 0.00057188 772.846876299439 777.850941776429 63.407 0.80921 63.407 62.985 63.794 3.8147E-06 317 68 6 0 0 0 0.00012284 3 37070 77.64 77.64 1 1.6437 1.7956 0 37566000 13950000 23616000 7645 46 2911 2987 11926;11927;11928 11928 EGDGVYYNELETR 13 0 1 Unmodified _EGDGVYYNELETR_ 0 0 0 A0A024R0H6;Q8N7H5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.8515 2 772.84681 1543.67907 69053.48 0.82931 0.00064093 -0.2629 -0.00020318 0.56641 0.00043775 772.846903156804 777.85042765287 74.326 0.93475 74.326 73.841 74.776 0 239 55 7 0 0 0 0.04273 1 39401 30.828 24.295 1 1.9713 1.694 0 6447400 2248200 4199300 7646 46 2911 2987 11929 11929 EGDGVYYNELETR 13 0 1 Unmodified _EGDGVYYNELETR_ 0 0 0 A0A024R0H6;Q8N7H5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.8483 2 772.84681 1543.67907 69906.19 0.59743 0.00046172 0.06361 4.9161E-05 0.66104 0.00051088 773.348302270975 777.850844544921 74.872 0.89503 74.872 74.539 75.434 0 217 58 7 0 0 0 0.014051 2 38920 37.6 35.594 1 1.7703 1.4952 0 4731300 1939000 2792300 7647 46 2911 2987 11930;11931 11930 EGDLIAAQAR 10 0 1 Unmodified _EGDLIAAQAR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2776 2 522.277638 1042.54072 82569.47 0.63504 0.00033167 -0.14271 -7.4534E-05 0.49233 0.00025713 522.277633354489 527.281652954316 38.836 0.90297 38.836 38.513 39.416 0 395 72 9 0 0 0 0.00066734 2 19901 83.168 65.541 1 1.2439 1.4604 0 222410000 101240000 121160000 7648 1440 2912 2988 11932;11933 11933 EGDLIAAQAR 10 0 1 Unmodified _EGDLIAAQAR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.2809 2 522.277638 1042.54072 82909.26 0.17509 9.1445E-05 -0.070066 -3.6594E-05 0.10502 5.4851E-05 522.277670261659 527.281658259288 38.009 0.83276 38.009 37.575 38.408 0 333 65 8 0 0 0 0.00017611 2 19751 94.85 71.496 1 1.1938 1.3884 0 393330000 170980000 222350000 7649 1440 2912 2988 11934;11935 11934 EGDLIAAQAR 10 0 1 Unmodified _EGDLIAAQAR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.2779 2 522.277638 1042.54072 83527.58 0.29319 0.00015313 0.3466 0.00018102 0.63979 0.00033415 522.27769456064 527.281978660795 43.897 1.0769 43.897 43.422 44.499 3.8147E-06 294 73 6 0 0 0 0.0010745 2 20742 76.605 71.87 1 1.382 1.1283 0 15638000 6838900 8799500 7650 1440 2912 2988 11936;11937 11937 EGDLIAAQAR 10 0 1 Unmodified _EGDLIAAQAR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.2776 2 522.277638 1042.54072 83098.31 0.33407 0.00017448 -0.11017 -5.7539E-05 0.2239 0.00011694 522.277634483416 527.281624289463 43.975 0.76056 43.975 43.646 44.406 3.8147E-06 224 49 6 0 0 0 0.0017496 2 20223 72.23 62.642 1 1.3633 1.1118 0 12768000 5445300 7322700 7651 1440 2912 2988 11938;11939 11939 EGDPLVFATVGSNR 14 0 1 Unmodified _EGDPLVFATVGSNR_ 0 0 0 O75530;B4DVW7;E9PJK2;B4DFK0 O75530 O75530 EED Polycomb protein EED ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.3711 2 731.370255 1460.72596 NaN NaN NaN 0.88571 0.00064778 NaN NaN NaN NaN 91.802 0.71413 91.802 91.394 92.108 0 0 0 0 0.00054383 1 55680 78.548 66.312 1 NaN NaN 0 13858000 13858000 0 7652 1407 2913 2989 11940 11940 EGDPLVFATVGSNR 14 0 1 Unmodified _EGDPLVFATVGSNR_ 0 0 0 O75530;B4DVW7;E9PJK2;B4DFK0 O75530 O75530 EED Polycomb protein EED MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.3787 2 731.370255 1460.72596 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.448 1 91.448 90.948 91.948 0 0 0 0 0.010784 1 55356 50.95 23.852 1 7653 1407 2913 2989 11941 11941 EGDPLVFATVGSNR 14 0 1 Unmodified _EGDPLVFATVGSNR_ 0 0 0 O75530;B4DVW7;E9PJK2;B4DFK0 O75530 O75530 EED Polycomb protein EED ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.3709 2 731.370255 1460.72596 NaN NaN NaN 0.70388 0.0005148 NaN NaN NaN NaN 90.882 0.60669 90.882 90.669 91.276 0 0 0 0 0.001293 2 56332 72.29 55.244 1 NaN NaN 0 33499000 33499000 0 7654 1407 2913 2989 11942;11943 11943 EGDPLVFATVGSNR 14 0 1 Unmodified _EGDPLVFATVGSNR_ 0 0 0 O75530;B4DVW7;E9PJK2;B4DFK0 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.374 2 731.370255 1460.72596 70169.73 0.65487 0.00047895 0.49373 0.0003611 1.1486 0.00084005 731.370975750551 736.374809558932 104.45 0.85014 104.45 104.06 104.91 7.6294E-06 279 53 8 0 0 0 5.0936E-05 2 59384 92.943 86.055 1 1.8056 1.4832 0 17384000 6415800 10968000 7655 1407 2913 2989 11944;11945 11944 EGDPLVFATVGSNR 14 0 1 Unmodified _EGDPLVFATVGSNR_ 0 0 0 O75530;B4DVW7;E9PJK2;B4DFK0 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 736.375 2 731.370255 1460.72596 68879.05 0.51005 0.00037304 0.41703 0.000305 0.92708 0.00067804 731.370731714841 736.374779554706 104.25 0.81892 104.25 103.94 104.76 7.6294E-06 277 50 8 0 0 0 0.0015642 1 58367 52.788 52.788 1 1.6803 1.3825 0 14048000 5078100 8969600 7656 1407 2913 2989 11946 11946 EGDQTSNNIPADIVFVLK 18 1 0 Unmodified _EGDQTSNNIPADIVFVLK_ 0 0 0 Q6FI51;Q6FHS4;P25685;M0R080 Q6FI51 Q6FI51 DNAJB1 DnaJ homolog subfamily B member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.5031 2 980.504737 1958.99492 57643.45 0.47884 0.0004695 -1.2839 -0.0012588 -0.80504 -0.00078934 981.004897017892 984.512662849064 123.82 0.38911 123.82 123.58 123.97 0 92 27 5 0 0 0 0.013782 1 80303 26.112 21.31 1 0.82488 0.84236 0 13171000 4563600 8607600 7657 1517 2914 2990 11947 11947 EGDQTSNNIPADIVFVLK 18 1 0 Unmodified _EGDQTSNNIPADIVFVLK_ 0 0 0 Q6FI51;Q6FHS4;P25685;M0R080 Q6FI51 Q6FI51 DNAJB1 DnaJ homolog subfamily B member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 984.5114 2 980.504737 1958.99492 55976.56 0.46063 0.00045165 -0.96676 -0.00094791 -0.50612 -0.00049626 981.005777063142 985.012321755006 123.38 0.75323 123.38 123.18 123.93 7.6294E-06 94 28 6 0 0 0 0.00076618 1 81868 41.092 41.092 1 1.0011 1.002 0 13976000 7062200 6914200 7658 1517 2914 2990 11948 11948 EGDREAIVAALLTR 14 0 2 Unmodified _EGDREAIVAALLTR_ 0 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.2826 3 505.282612 1512.82601 84872.82 0.50502 0.00025518 -0.27578 -0.00013935 0.22924 0.00011583 505.282378614521 511.954747102463 109.79 0.52418 109.79 109.5 110.03 7.6294E-06 129 25 8 0 0 0 0.0053576 2 63280 29.618 29.618 1 1.0992 0.92731 0 10488000 4802400 5685300 7659 899;1099 2915 2991 11949;11950 11949 EGDREAIVAALLTR 14 0 2 Unmodified _EGDREAIVAALLTR_ 0 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.2829 3 505.282612 1512.82601 86184.73 0.50998 0.00025768 -0.36608 -0.00018497 0.14389 7.2707E-05 505.282438307266 511.954683442247 109.6 0.53338 109.6 109.29 109.82 0 122 24 7 0 0 0 0.0016105 1 62251 35.091 35.091 1 1.0511 0.95256 0 5278900 2480400 2798400 7660 899;1099 2915 2991 11951 11951 EGDVEEPTDDSLPTTGDAGGREPMEEK 27 1 1 Oxidation (M) _EGDVEEPTDDSLPTTGDAGGREPM(ox)EEK_ EGDVEEPTDDSLPTTGDAGGREPM(1)EEK EGDVEEPTDDSLPTTGDAGGREPM(64.49)EEK 0 1 1 Q9UKN8 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.4146 3 959.745333 2876.21417 62458.79 0.44759 0.00042957 0.040668 3.903E-05 0.48826 0.0004686 960.413835277766 965.752794772273 53.369 0.42439 53.369 53.144 53.569 -3.8147E-06 161 32 8 0 0 0 6.4182E-16 2 29764 64.488 63.589 1 1.0748 1.171 0 16110000 6443000 9667100 7661 2107 2916 2992 11952;11953 11953 1937 EGDVEEPTDDSLPTTGDAGGREPMEEK 27 1 1 Oxidation (M) _EGDVEEPTDDSLPTTGDAGGREPM(ox)EEK_ EGDVEEPTDDSLPTTGDAGGREPM(1)EEK EGDVEEPTDDSLPTTGDAGGREPM(44.63)EEK 0 1 1 Q9UKN8 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.087 3 959.745333 2876.21417 62063.94 0.52697 0.00050576 -0.19623 -0.00018833 0.33074 0.00031742 960.079564803234 965.752811369682 52.257 0.46653 52.257 52.017 52.484 -3.8147E-06 229 35 8 0 0 0 5.6596E-07 1 29645 44.625 44.625 1 1.0763 1.2243 0 18784000 8777500 10007000 7662 2107 2916 2992 11954 11954 1937 EGDVLTLLESER 12 0 1 Unmodified _EGDVLTLLESER_ 0 0 0 B2R4R9;P62857 B2R4R9 B2R4R9 RPS28 40S ribosomal protein S28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.8517 2 680.851364 1359.68817 73663.8 0.54522 0.00037121 0.22871 0.00015572 0.77392 0.00052693 680.851580205652 685.85554592662 109.52 1.1478 109.52 109.18 110.33 -7.6294E-06 509 82 10 0 0 0 3.1955E-38 3 68495 185.96 185.96 1 1.1903 1.4098 0 418010000 188460000 229550000 7663 829 2917 2993 11955;11956;11957 11955 EGDVLTLLESER 12 0 1 Unmodified _EGDVLTLLESER_ 0 0 0 B2R4R9;P62857 B2R4R9 B2R4R9 RPS28 40S ribosomal protein S28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.8553 2 680.851364 1359.68817 73562.7 0.78274 0.00053293 -0.059558 -4.055E-05 0.72318 0.00049238 680.851219803528 685.855384261871 109 1.3361 109 108.65 109.98 0 508 94 10 0 0 0 6.7456E-18 3 69707 143.4 143.4 1 1.1499 1.3328 0 298120000 143370000 154750000 7664 829 2917 2993 11958;11959;11960 11958 EGDVLTLLESER 12 0 1 Unmodified _EGDVLTLLESER_ 0 0 0 B2R4R9;P62857 B2R4R9 B2R4R9 RPS28 40S ribosomal protein S28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.8549 2 680.851364 1359.68817 73242.62 0.74013 0.00050392 -0.11026 -7.5069E-05 0.62987 0.00042885 680.851565157819 685.855097584078 120.91 0.54387 120.91 120.65 121.19 -7.6294E-06 186 26 9 0 0 0 2.2009E-13 2 71868 136.49 127.59 1 1.2681 1.087 0 41436000 18176000 23260000 7665 829 2917 2993 11961;11962 11962 EGDVLTLLESER 12 0 1 Unmodified _EGDVLTLLESER_ 0 0 0 B2R4R9;P62857 B2R4R9 B2R4R9 RPS28 40S ribosomal protein S28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.8517 2 680.851364 1359.68817 72355.7 0.79874 0.00054382 0.046308 3.1529E-05 0.84505 0.00057535 680.851553520134 685.855288577161 120.68 0.73259 120.68 120.44 121.17 0 203 35 9 0 0 0 2.6587E-18 2 70769 147.74 147.74 1 1.2811 1.1175 0 44089000 19343000 24746000 7666 829 2917 2993 11963;11964 11964 EGDVLTPEQAR 11 0 1 Unmodified _EGDVLTPEQAR_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.8041 2 607.804217 1213.59388 76661.88 0.68143 0.00041418 -0.19603 -0.00011915 0.4854 0.00029503 607.804106218677 612.808232765833 38.4 0.83867 38.4 38.056 38.895 3.8147E-06 362 70 9 0 0 0 5.164E-10 2 19746 129.85 101.64 1 1.0323 1.1807 0 127660000 62173000 65485000 7667 302 2918 2994 11965;11966 11966 EGDVLTPEQAR 11 0 1 Unmodified _EGDVLTPEQAR_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8085 2 607.804217 1213.59388 75635.91 0.32059 0.00019485 0.047878 2.91E-05 0.36846 0.00022395 607.804186428431 612.808238075311 37.47 0.75026 37.47 37.157 37.908 0 327 60 9 0 0 0 6.3739E-10 2 19421 127.94 101.77 1 1.0586 1.2096 0 152370000 70957000 81414000 7668 302 2918 2994 11967;11968 11967 EGDVLTPEQAR 11 0 1 Unmodified _EGDVLTPEQAR_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.8083 2 607.804217 1213.59388 76622.95 0.44176 0.0002685 0.11179 6.7945E-05 0.55354 0.00033645 607.804186857349 612.808190263351 43.564 1.1251 43.564 43.194 44.319 0 326 76 8 0 0 0 0.00047879 2 20474 75.294 59.888 1 0.91976 0.76305 0 20663000 10639000 10024000 7669 302 2918 2994 11969;11970 11969 EGDVLTPEQAR 11 0 1 Unmodified _EGDVLTPEQAR_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.8044 2 607.804217 1213.59388 76494.02 0.39312 0.00023894 0.01866 1.1342E-05 0.41178 0.00025028 607.80421852494 612.808077074505 43.71 1.029 43.71 43.248 44.277 -3.8147E-06 337 68 9 0 0 0 0.00038376 2 20005 82.749 71.585 1 0.9159 0.77433 0 18103000 9527100 8575800 7670 302 2918 2994 11971;11972 11971 EGDYVPPEK 9 1 0 Unmodified _EGDYVPPEK_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;Q6ZUE0;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.2523 2 517.245472 1032.47639 NaN NaN NaN -0.24172 -0.00012503 NaN NaN NaN NaN 26.516 1.3749 26.516 25.982 27.357 0 0 0 0 0.023125 1 11843 56.434 41.765 1 NaN NaN 0 14834000 0 14834000 7671 886 2919 2995 11973 11973 EGDYVPPEK 9 1 0 Unmodified _EGDYVPPEK_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;Q6ZUE0;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.2516 2 517.245472 1032.47639 NaN NaN NaN -0.22553 -0.00011665 NaN NaN NaN NaN 26.16 1.0411 26.16 25.781 26.822 -1.9073E-06 0 0 0 0.016418 1 11591 61.691 61.691 1 NaN NaN 0 11840000 0 11840000 7672 886 2919 2995 11974 11974 EGEDSSVIHYDDK 13 1 0 Unmodified _EGEDSSVIHYDDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.3237 2 747.323167 1492.63178 70510.65 0.97215 0.00072651 -0.1495 -0.00011173 0.82265 0.00061478 747.323211193474 751.329898061078 32.166 0.77579 32.166 31.781 32.556 0 371 72 7 0 0 0 1.3272E-20 2 15820 150.46 134.58 1 0.72408 0.77809 0 39784000 23376000 16408000 7673 515 2920 2996 11975;11976 11976 EGEDSSVIHYDDK 13 1 0 Unmodified _EGEDSSVIHYDDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.5515 3 498.551204 1492.63178 85428.99 0.61083 0.00030453 0.11977 5.9709E-05 0.7306 0.00036424 498.551224576836 501.222526909128 32.18 0.91722 32.18 31.762 32.679 0 463 84 8 0 0 0 6.6496E-05 1 15890 57.159 57.159 1 0.74106 0.80371 0 45015000 25689000 19326000 7674 515 2920 2996 11977 11977 EGEDSSVIHYDDK 13 1 0 Unmodified _EGEDSSVIHYDDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3236 2 747.323167 1492.63178 71274.28 0.83928 0.00062721 -0.27884 -0.00020838 0.56044 0.00041883 747.323239512813 751.329386359345 31.605 0.83686 31.605 31.12 31.957 0 327 74 7 0 0 0 2.0572E-23 2 15483 151.79 135.91 1 0.73323 0.79605 0 39242000 22508000 16734000 7675 515 2920 2996 11978;11979 11979 EGEDSSVIHYDDK 13 1 0 Unmodified _EGEDSSVIHYDDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.5512 3 498.551204 1492.63178 85409.88 0.42974 0.00021425 0.16269 8.1109E-05 0.59243 0.00029536 498.551201603974 501.222582572501 31.564 0.85716 31.564 31.1 31.957 0 411 76 8 0 0 0 0.0016838 1 15516 49.298 49.298 1 0.7062 0.7764 0 42217000 23663000 18555000 7676 515 2920 2996 11980 11980 EGEDSSVIHYDDK 13 1 0 Unmodified _EGEDSSVIHYDDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.5512 3 498.551204 1492.63178 86441.85 0.16408 8.18E-05 0.1593 7.9419E-05 0.32338 0.00016122 498.551144050029 501.222553206674 37.185 0.67799 37.185 36.902 37.58 0 305 53 10 0 0 0 0.013545 2 16672 29.937 29.937 1 1.8499 1.4482 0 11675000 3963600 7711100 7677 515 2920 2996 11981;11982 11982 EGEDSSVIHYDDK 13 1 0 Unmodified _EGEDSSVIHYDDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.3231 2 747.323167 1492.63178 70987.83 0.61921 0.00046275 -0.2335 -0.0001745 0.38571 0.00028825 747.323054233245 751.329934471932 37.178 0.81263 37.178 36.697 37.509 0 299 67 8 0 0 0 2.6219E-06 2 16673 109.39 101.17 1 1.8253 1.443 0 10570000 4160500 6410000 7678 515 2920 2996 11983;11984 11984 EGEDSSVIHYDDK 13 1 0 Unmodified _EGEDSSVIHYDDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.2228 3 498.551204 1492.63178 85730.77 -0.059993 -2.9909E-05 0.16568 8.26E-05 0.10569 5.2691E-05 498.551221934377 501.222650970047 37.341 0.65863 37.341 37.012 37.671 0 335 54 8 0 0 0 0.0010128 1 16275 41.092 41.092 1 1.9887 1.6333 0 9409400 3076400 6333000 7679 515 2920 2996 11985 11985 EGEDSSVIHYDDK 13 1 0 Unmodified _EGEDSSVIHYDDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.3294 2 747.323167 1492.63178 70467.03 0.3318 0.00024796 -0.32833 -0.00024537 0.0034709 2.5939E-06 747.323087207487 751.330070809213 37.322 0.59365 37.322 37.043 37.637 -3.8147E-06 321 48 9 0 0 0 7.3664E-05 1 16284 94.767 87.561 1 1.902 1.5589 0 8749900 2963000 5786900 7680 515 2920 2996 11986 11986 EGEELVMDEEAYVLYHR 17 0 1 Oxidation (M) _EGEELVM(ox)DEEAYVLYHR_ EGEELVM(1)DEEAYVLYHR EGEELVM(77.56)DEEAYVLYHR 0 1 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.6563 3 699.985972 2096.93609 74353.98 0.91167 0.00063816 -0.032168 -2.2517E-05 0.8795 0.00061564 700.320354444738 703.322096034159 93.869 0.45284 93.869 93.663 94.115 7.6294E-06 153 41 6 0 0 0 1.286E-05 1 56973 77.562 73.842 1 0.89659 0.91587 0 18868000 10121000 8747000 7681 1922 2921 2997 11987 11987 1752 EGEELVMDEEAYVLYHR 17 0 1 Oxidation (M) _EGEELVM(ox)DEEAYVLYHR_ EGEELVM(1)DEEAYVLYHR EGEELVM(42.34)DEEAYVLYHR 0 1 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.6568 3 699.985972 2096.93609 NaN NaN NaN 0.32147 0.00022502 NaN NaN NaN NaN 93.546 0.36707 93.546 93.371 93.738 -7.6294E-06 0 0 0 0.013206 1 57991 42.338 38.434 1 NaN NaN 0 10104000 0 10104000 7682 1922 2921 2997 11988 11988 1752 EGEELVMDEEAYVLYHR 17 0 1 Oxidation (M) _EGEELVM(ox)DEEAYVLYHR_ EGEELVM(1)DEEAYVLYHR EGEELVM(45.14)DEEAYVLYHR 0 1 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.9854 3 699.985972 2096.93609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.62 1 93.62 93.12 94.12 0 0 0 0 0.0017352 1 58120 45.14 42.321 1 7683 1922 2921 2997 11989 11989 1752 EGEEPTVYSDEEEPK 15 1 0 Unmodified _EGEEPTVYSDEEEPK_ 0 0 0 Q6IB11;O00264 Q6IB11 Q6IB11 PGRMC1 Membrane-associated progesterone receptor component 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.3776 2 869.370512 1736.72647 NaN NaN NaN 0.12272 0.00010669 NaN NaN NaN NaN 43.054 0.1841 43.054 42.912 43.096 0 0 0 0 0.00055323 1 22961 70.488 65.972 1 NaN NaN 0 2138300 0 2138300 7684 1361 2922 2998 11990 11990 EGEEPTVYSDEEEPK 15 1 0 Unmodified _EGEEPTVYSDEEEPK_ 0 0 0 Q6IB11;O00264 Q6IB11 Q6IB11 PGRMC1 Membrane-associated progesterone receptor component 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.3813 2 869.370512 1736.72647 NaN NaN NaN 0.14882 0.00012938 NaN NaN NaN NaN 42.42 0.3213 42.42 42.214 42.536 0 0 0 0 0.00050047 1 22771 71.555 66.575 1 NaN NaN 0 4104900 0 4104900 7685 1361 2922 2998 11991 11991 EGEFVAQFK 9 1 0 Unmodified _EGEFVAQFK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.7703 2 527.763832 1053.51311 NaN NaN NaN 0.27187 0.00014348 NaN NaN NaN NaN 65.364 0.90635 65.364 64.895 65.801 7.6294E-06 0 0 0 0.0076027 1 37789 69.905 52.941 1 NaN NaN 0 6901800 0 6901800 7686 328 2923 2999 11992 11992 EGELTVAQGR 10 0 1 Unmodified _EGELTVAQGR_ 0 0 0 Q03252 Q03252 Q03252 LMNB2 Lamin-B2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2787 2 530.275095 1058.53564 NaN NaN NaN -1.2144 -0.00064397 NaN NaN NaN NaN 29.72 0.27428 29.72 29.588 29.862 0 0 0 0 0.00099723 1 14448 88.37 29.774 1 NaN NaN 0 6119200 0 6119200 7687 1682 2924 3000 11993 11993 EGELTVAQGR 10 0 1 Unmodified _EGELTVAQGR_ 0 0 0 Q03252 Q03252 Q03252 LMNB2 Lamin-B2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2736 2 530.275095 1058.53564 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.718 1 29.718 29.218 30.218 1.9073E-06 0 0 0 7.2801E-05 1 14443 82.563 23.318 1 7688 1682 2924 3000 11994 11994 EGELTVAQGR 10 0 1 Unmodified _EGELTVAQGR_ 0 0 0 Q03252 Q03252 Q03252 LMNB2 Lamin-B2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.2784 2 530.275095 1058.53564 NaN NaN NaN -1.077 -0.00057112 NaN NaN NaN NaN 29.235 0.25911 29.235 29.096 29.355 0 0 0 0 9.6582E-05 1 14094 96.948 34.401 1 NaN NaN 0 9145700 0 9145700 7689 1682 2924 3000 11995 11995 EGENPPDGFMAPK 13 1 0 Oxidation (M) _EGENPPDGFM(ox)APK_ EGENPPDGFM(1)APK EGENPPDGFM(90.14)APK 0 1 0 Q5TB52;B4DWB5;O95340;Q9UIR2 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.8171 2 702.808642 1403.60273 NaN NaN NaN -0.040993 -2.8811E-05 NaN NaN NaN NaN 45.963 0.48887 45.963 45.685 46.173 0 0 0 0 5.0733E-05 1 25215 90.142 84.983 1 NaN NaN 0 14574000 0 14574000 7690 1044 2925 3001 11996 11996 817 EGETVEPYK 9 1 0 Unmodified _EGETVEPYK_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2586 2 526.250754 1050.48696 83242.7 0.35932 0.00018909 0.23863 0.00012558 0.59795 0.00031467 526.250762032436 530.257856996194 26.56 0.44148 26.56 26.282 26.723 0 148 25 8 0 0 0 0.00028235 2 11805 103.56 93.149 1 1.2696 1.44 0 95057000 43074000 51983000 7691 1691 2926 3002 11997;11998 11997 EGETVEPYK 9 1 0 Unmodified _EGETVEPYK_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.2582 2 526.250754 1050.48696 83088.11 0.55106 0.00029 0.086037 4.5277E-05 0.6371 0.00033528 526.250704869503 530.257856509599 26.126 0.35235 26.126 25.953 26.305 0 111 17 9 0 0 0 6.4488E-06 2 11568 131.06 113.7 1 1.2573 1.4162 0 123230000 56114000 67113000 7692 1691 2926 3002 11999;12000 11999 EGFLDTLVVLHR 12 0 1 Unmodified _EGFLDTLVVLHR_ 0 0 0 J3QRG6;K7PML8;P42771;K7ES20;L8E941;K7ENC6;D1LYX3;K7PPU3;P42772 J3QRG6 J3QRG6 CDKN2A;CDKN2B Cyclin-dependent kinase inhibitor 2A;Cyclin-dependent kinase 4 inhibitor B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.2654 3 466.92951 1397.7667 90892.74 0.47577 0.00022215 0.11666 5.4472E-05 0.59243 0.00027662 467.263818824469 470.265635130673 113 0.5258 113 112.73 113.25 0 169 37 6 0 0 0 0.0012315 2 71295 51.841 47.325 1 1.8645 1.9563 0 11074000 3539000 7534800 7693 1339 2927 3003 12001;12002 12001 EGFLDTLVVLHR 12 0 1 Unmodified _EGFLDTLVVLHR_ 0 0 0 J3QRG6;K7PML8;P42771;K7ES20;L8E941;K7ENC6;D1LYX3;K7PPU3;P42772 J3QRG6 J3QRG6 CDKN2A;CDKN2B Cyclin-dependent kinase inhibitor 2A;Cyclin-dependent kinase 4 inhibitor B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.8963 2 699.890626 1397.7667 74861.66 0.82865 0.00057996 0.39361 0.00027548 1.2223 0.00085545 699.890551366591 704.895152928517 112.99 0.50718 112.99 112.71 113.22 0 140 35 5 0 0 0 2.492E-05 2 71337 101.11 101.11 1 1.7191 1.807 0 11516000 3856700 7659700 7694 1339 2927 3003 12003;12004 12003 EGFLDTLVVLHR 12 0 1 Unmodified _EGFLDTLVVLHR_ 0 0 0 J3QRG6;K7PML8;P42771;K7ES20;L8E941;K7ENC6;D1LYX3;K7PPU3;P42772 J3QRG6 J3QRG6 CDKN2A;CDKN2B Cyclin-dependent kinase inhibitor 2A;Cyclin-dependent kinase 4 inhibitor B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.8962 2 699.890626 1397.7667 75077.41 1.0104 0.00070714 0.86648 0.00060644 1.8768 0.0013136 699.890316240879 704.894786056129 112.19 0.47459 112.19 111.94 112.41 0 167 36 6 0 0 0 0.00021968 2 72439 82.749 82.749 1 1.9858 1.9566 0 13120000 3945200 9175100 7695 1339 2927 3003 12005;12006 12005 EGFLDTLVVLHR 12 0 1 Unmodified _EGFLDTLVVLHR_ 0 0 0 J3QRG6;K7PML8;P42771;K7ES20;L8E941;K7ENC6;D1LYX3;K7PPU3;P42772 J3QRG6 J3QRG6 CDKN2A;CDKN2B Cyclin-dependent kinase inhibitor 2A;Cyclin-dependent kinase 4 inhibitor B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.6 3 466.92951 1397.7667 89625.72 0.5676 0.00026503 -0.42892 -0.00020027 0.13868 6.4752E-05 466.929253828729 470.265383839425 112.22 0.52069 112.22 111.94 112.46 0 175 39 6 0 0 0 0.0012315 2 72451 45.257 40.741 1 1.863 1.8404 0 12676000 4596800 8079300 7696 1339 2927 3003 12007;12008 12007 EGFPITALR 9 0 1 Unmodified _EGFPITALR_ 0 0 0 B5BU53;B2R9L6;A0A024R880;P50750;X6RE90 B5BU53 B5BU53 CDK9 Cyclin-dependent kinase 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.2865 2 502.282192 1002.54983 87823.67 0.21359 0.00010728 0.6891 0.00034612 0.90269 0.0004534 502.28252038922 507.286573268989 86.097 0.33465 86.097 85.896 86.231 0 90 28 5 0 0 0 0.012314 1 51740 57.59 0 1 1.1888 1.2492 0 11230000 5464100 5765600 7697 243 2928 3004 12009 12009 EGFPITALR 9 0 1 Unmodified _EGFPITALR_ 0 0 0 B5BU53;B2R9L6;A0A024R880;P50750;X6RE90 B5BU53 B5BU53 CDK9 Cyclin-dependent kinase 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.2863 2 502.282192 1002.54983 90858.53 0.30193 0.00015165 -2.7598 -0.0013862 -2.4579 -0.0012346 502.782071102118 507.284935763758 89.042 0.15569 89.042 88.957 89.113 0 23 10 4 0 0 0 0.020893 1 53756 49.85 0 1 2.9579 3.0181 0 30766000 10510000 20255000 7698 243 2928 3004 12010 12010 EGFPITALR 9 0 1 Unmodified _EGFPITALR_ 0 0 0 B5BU53;B2R9L6;A0A024R880;P50750;X6RE90 B5BU53 B5BU53 CDK9 Cyclin-dependent kinase 9 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.2856 2 502.282192 1002.54983 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.903 1 87.903 87.403 88.403 7.6294E-06 0 0 0 0.015606 1 54217 58.23 0 1 7699 243 2928 3004 12011 12011 EGGFLLLHTLLR 12 0 1 Unmodified _EGGFLLLHTLLR_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.9084 2 684.903537 1367.79252 77858.98 0.72958 0.00049969 -0.08782 -6.0148E-05 0.64176 0.00043954 684.90325510602 689.907527121792 116.75 0.53728 116.75 116.51 117.05 7.6294E-06 116 35 5 0 0 0 0.0024057 2 74525 60.518 49.689 1 1.4157 1.4387 0 7434100 3127400 4306700 7700 587 2929 3005 12012;12013 12012 EGGGDEPLNFLDPK 14 1 0 Unmodified _EGGGDEPLNFLDPK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97;B3KPQ2;A0A087X0G0 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3549 2 744.354271 1486.69399 NaN NaN NaN 0.53898 0.00040119 NaN NaN NaN NaN 102.07 0.91924 102.07 101.56 102.48 0 0 0 0 9.3416E-10 1 62747 111.86 104.92 1 NaN NaN 0 15809000 15809000 0 7701 907 2930 3006 12014 12014 EGGGDEPLNFLDPK 14 1 0 Unmodified _EGGGDEPLNFLDPK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97;B3KPQ2;A0A087X0G0 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.3611 2 744.354271 1486.69399 NaN NaN NaN 0.16646 0.00012391 NaN NaN NaN NaN 101.29 0.92609 101.29 100.87 101.8 0 0 0 0 9.6338E-05 3 63847 89.403 81.08 1 NaN NaN 0 20132000 0 20132000 7702 907 2930 3006 12015;12016;12017 12015 EGGGDEPLNFLDPK 14 1 0 Unmodified _EGGGDEPLNFLDPK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97;B3KPQ2;A0A087X0G0 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.3618 2 744.354271 1486.69399 NaN NaN NaN -0.41776 -0.00031096 NaN NaN NaN NaN 114.06 0.79396 114.06 113.7 114.49 0 0 0 0 0.0078008 1 66550 53.569 46.879 1 NaN NaN 0 6579300 0 6579300 7703 907 2930 3006 12018 12018 EGGVTFTWVEK 11 1 0 Unmodified _EGGVTFTWVEK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.8203 2 626.814053 1251.61355 NaN NaN NaN -0.20288 -0.00012717 NaN NaN NaN NaN 88.659 0.2832 88.659 88.547 88.83 0 0 0 0 0.0011644 1 53465 85.29 73.054 1 NaN NaN 0 8215100 0 8215100 7704 1015 2931 3007 12019 12019 EGHLSPDIVAEQK 13 1 0 Unmodified _EGHLSPDIVAEQK_ 0 0 0 B4DLR8;Q3B792;H3BRK3;P15559;H3BNV2 B4DLR8 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.875 2 711.864805 1421.71506 NaN NaN NaN 0.97802 0.00069622 NaN NaN NaN NaN 43.89 0.16639 43.89 43.817 43.984 3.8147E-06 0 0 0 1.0724E-29 1 23521 154.15 134.16 1 NaN NaN 0 8220900 0 8220900 7705 1000 2932 3008 12020 12020 EGHLSPDIVAEQK 13 1 0 Unmodified _EGHLSPDIVAEQK_ 0 0 0 B4DLR8;Q3B792;H3BRK3;P15559;H3BNV2 B4DLR8 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.8725 2 711.864805 1421.71506 72784.3 0.92815 0.00066072 0.12046 8.5754E-05 1.0486 0.00074647 711.864507584615 715.872083600001 42.656 0.46895 42.656 42.512 42.981 0 108 38 6 0 0 0 5.9411E-06 2 23004 105.2 96.614 1 4.7989 5.1589 0 37548000 4465200 33082000 7706 1000 2932 3008 12021;12022 12021 EGHQVALLSGEMMVEQR 17 0 1 2 Oxidation (M) _EGHQVALLSGEM(ox)M(ox)VEQR_ EGHQVALLSGEM(1)M(1)VEQR EGHQVALLSGEM(75.68)M(75.68)VEQR 0 2 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.9793 3 649.308392 1944.90335 75424.26 0.39175 0.00025437 0.17904 0.00011625 0.57079 0.00037062 649.308890302958 652.644669049209 53.019 0.39345 53.019 52.773 53.166 0 109 29 6 0 0 0 2.6492E-05 1 29556 75.682 75.682 1 4.5742 4.6621 0 27064000 4519700 22544000 7707 593 2933 3009 12023 12023 450;451 EGHQVALLSGEMMVEQR 17 0 1 2 Oxidation (M) _EGHQVALLSGEM(ox)M(ox)VEQR_ EGHQVALLSGEM(1)M(1)VEQR EGHQVALLSGEM(69.93)M(69.93)VEQR 0 2 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.9786 3 649.308392 1944.90335 NaN NaN NaN -0.30698 -0.00019932 NaN NaN NaN NaN 51.713 0.46358 51.713 51.431 51.895 0 0 0 0 1.5572E-05 1 29276 69.935 65.067 1 NaN NaN 0 16251000 0 16251000 7708 593 2933 3009 12024 12024 450;451 EGIESGDPGTDDGR 14 0 1 Unmodified _EGIESGDPGTDDGR_ 0 0 0 Q12797 Q12797 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.7978 2 702.797317 1403.58008 73448.28 0.059351 4.1712E-05 0.16821 0.00011822 0.22756 0.00015993 702.797440867094 707.802154603174 23.845 0.23304 23.845 23.725 23.958 0 30 8 5 0 0 0 0.00019766 1 9645 69.672 65.626 1 0.48964 0.4958 0 5482500 3447000 2035500 7709 1700 2934 3010 12025 12025 EGINIFLDGYVPTENLR 17 0 1 Unmodified _EGINIFLDGYVPTENLR_ 0 0 0 P61221;D6R9I9 P61221 P61221 ABCE1 ATP-binding cassette sub-family E member 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.0226 2 975.501997 1948.98944 59039.87 0.59078 0.00057631 0.2998 0.00029245 0.89058 0.00086877 975.502247517882 980.506096929539 124.16 0.38294 124.16 123.97 124.36 0 70 25 5 0 0 0 0.023343 1 82611 40.066 30.533 1 1.6562 1.6711 0 10375000 3285500 7089100 7710 1628 2935 3011 12026 12026 EGININR 7 0 1 Unmodified _EGININR_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.2226 2 408.222134 814.429715 95713.46 -0.11206 -4.5747E-05 0.37845 0.00015449 0.26639 0.00010875 408.222237856514 413.226412492503 29.735 0.34343 29.735 29.6 29.944 0 107 28 6 0 0 0 0.032919 1 14423 64.776 40.59 1 0.89417 0.99469 0 76719000 40107000 36612000 7711 1803 2936 3012 12027 12027 EGININR 7 0 1 Unmodified _EGININR_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.2229 2 408.222134 814.429715 93367.12 0.53873 0.00021992 0.16272 6.6427E-05 0.70145 0.00028635 408.222124710909 413.226266233144 29.223 0.2995 29.223 29.096 29.395 0 84 20 6 0 0 0 0.032919 1 14046 64.776 45.214 1 0.83382 0.95311 0 89072000 46332000 42740000 7712 1803 2936 3012 12028 12028 EGIPALDNFLDKL 13 1 0 Unmodified _EGIPALDNFLDKL_ 0 0 1 P13639;Q8TA90;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.8883 2 722.887749 1443.76095 72021.94 0.62543 0.00045211 0.15979 0.00011551 0.78522 0.00056762 722.887947533169 726.894967929949 133.52 0.23409 133.52 133.35 133.59 0 33 5 10 0 0 0 2.8646E-06 1 87505 110.54 90.237 1 1.6338 1.8687 0 185240000 42851000 142390000 7713 1478 2937 3013 12029 12029 EGIPPDQQR 9 0 1 Unmodified _EGIPPDQQR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q9UFQ0;Q96H31;Q66K58;Q59EM9;J3QSA3;F5GZ39;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.2675 2 520.261988 1038.50942 83029.9 0.34629 0.00018016 0.58871 0.00030629 0.935 0.00048644 520.261964415924 525.266049646956 21.491 3.0556 21.491 20.108 23.164 0 789 160 8 0 0 0 0.0018358 6 7724 80.229 54.335 1 0.77825 0.87207 0 90482000 52443000 38039000 7714 891 2938 3014 12030;12031;12032;12033;12034;12035 12033 EGIQWEAK 8 1 0 Unmodified _EGIQWEAK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.7431 2 480.742899 959.471246 88219.75 -0.10741 -5.1638E-05 0.41213 0.00019813 0.30472 0.00014649 480.7429070144 484.750128899854 45.911 0.83215 45.911 45.505 46.337 0 249 74 5 0 0 0 0.0090807 2 24616 75.854 49.252 1 0.9011 0.97252 0 37168000 19170000 17999000 7715 515 2939 3015 12036;12037 12036 EGIQWEAK 8 1 0 Unmodified _EGIQWEAK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.7425 2 480.742899 959.471246 87926.02 0.15243 7.3279E-05 0.11209 5.3886E-05 0.26452 0.00012716 480.742899221417 484.749992727747 45.036 0.81256 45.036 44.589 45.402 -3.8147E-06 233 66 5 0 0 0 0.0088018 3 24592 77.058 49.252 1 0.84162 0.91374 0 39244000 21926000 17317000 7716 515 2939 3015 12038;12039;12040 12039 EGIQWEAK 8 1 0 Unmodified _EGIQWEAK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.7502 2 480.742899 959.471246 88161.25 0.042091 2.0235E-05 0.13287 6.3879E-05 0.17497 8.4114E-05 480.742906047814 484.749988503904 52.662 0.77069 52.662 52.264 53.034 -3.8147E-06 270 60 8 0 0 0 0.017078 1 26057 60.682 43.718 1 1.8964 1.4989 0 5165200 1687900 3477300 7717 515 2939 3015 12041 12041 EGIVQTEQIR 10 0 1 Unmodified _EGIVQTEQIR_ 0 0 0 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.8231 2 586.817127 1171.6197 78811.04 0.81394 0.00047764 0.069835 4.098E-05 0.88378 0.00051862 586.817102764733 591.82112234918 46.453 0.66033 46.453 46.055 46.716 -3.8147E-06 256 56 8 0 0 0 1.9962E-10 3 25064 137.14 106.06 1 2.1533 2.3806 0 58163000 18432000 39731000 7718 1851 2940 3016 12042;12043;12044 12044 EGIVQTEQIR 10 0 1 Unmodified _EGIVQTEQIR_ 0 0 0 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.8214 2 586.817127 1171.6197 78339.64 0.76313 0.00044782 -0.36589 -0.00021471 0.39723 0.0002331 586.816957994266 591.820792022243 45.407 0.71508 45.407 45.062 45.777 0 206 61 6 0 0 0 3.6798E-08 2 24884 118.5 93.358 1 2.2719 2.6095 0 78402000 26006000 52396000 7719 1851 2940 3016 12045;12046 12045 EGIVQTEQIR 10 0 1 Unmodified _EGIVQTEQIR_ 0 0 0 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 591.8217 2 586.817127 1171.6197 80700.57 0.521 0.00030573 0.14663 8.6043E-05 0.66763 0.00039177 586.817283352616 591.821221733825 53.497 0.57864 53.497 53.199 53.778 0 147 40 6 0 0 0 0.0029784 1 26505 66.621 51.955 1 2.4911 2.091 0 4221700 1234200 2987500 7720 1851 2940 3016 12047 12047 EGKEEAEETNVLPK 14 2 0 Unmodified _EGKEEAEETNVLPK_ 0 0 1 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.8915 2 786.891217 1571.76788 71029.13 0.62378 0.00049084 -0.38499 -0.00030295 0.23878 0.0001879 786.890629824869 794.904757135463 35.144 0.3846 35.144 35.017 35.401 0 88 34 5 0 0 0 6.4509E-06 2 17703 109.16 79.606 1 0.94996 1.1102 0 12477000 6251100 6226100 7721 1741 2941 3017 12048;12049 12049 EGKEEAEETNVLPK 14 2 0 Unmodified _EGKEEAEETNVLPK_ 0 0 1 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.8908 2 786.891217 1571.76788 70488.67 0.55963 0.00044037 -0.39471 -0.00031059 0.16492 0.00012978 786.89122548773 794.9044812761 33.998 0.40906 33.998 33.819 34.228 0 82 31 4 0 0 0 1.6326E-20 2 17139 145.31 113.82 1 1.1623 1.3287 0 15981000 5364400 10617000 7722 1741 2941 3017 12050;12051 12051 EGKEEAEETNVLPK 14 2 0 Unmodified _EGKEEAEETNVLPK_ 0 0 1 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 786.8911 2 786.891217 1571.76788 67913.13 0.42515 0.00033455 -0.029765 -2.3422E-05 0.39539 0.00031113 786.890873850795 794.905366224029 40.386 0.50787 40.386 40.126 40.634 0 169 38 6 0 0 0 0.0067333 2 18570 55.04 55.04 1 1.4512 1.2471 0 6942500 2643900 4298700 7723 1741 2941 3017 12052;12053 12053 EGKEEAEETNVLPK 14 2 0 Unmodified _EGKEEAEETNVLPK_ 0 0 1 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.9302 3 524.929904 1571.76788 80617.07 0.1431 7.512E-05 0.074601 3.916E-05 0.2177 0.00011428 524.929999991283 530.272433282516 40.4 0.68856 40.4 39.992 40.681 -3.8147E-06 209 53 7 0 0 0 0.013013 1 18621 26.148 25.641 1 1.5877 1.3563 0 13908000 5529000 8378600 7724 1741 2941 3017 12054 12054 EGKEEAEETNVLPK 14 2 0 Unmodified _EGKEEAEETNVLPK_ 0 0 1 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.2725 3 524.929904 1571.76788 81821.69 0.14271 7.491E-05 0.072787 3.8208E-05 0.21549 0.00011312 525.265292764667 530.27234936581 40.427 0.75507 40.427 40.121 40.876 -3.8147E-06 255 63 6 0 0 0 0.0041969 1 18048 29.363 29.363 1 1.6742 1.4128 0 8761900 3686100 5075800 7725 1741 2941 3017 12055 12055 EGLDEVAGIINDAK 14 1 0 Unmodified _EGLDEVAGIINDAK_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.3765 2 722.369921 1442.72529 71657.74 0.56688 0.0004095 0.31311 0.00022618 0.87999 0.00063568 722.370046096806 726.377201885816 117.05 0.43448 117.05 116.84 117.27 0 60 17 5 0 0 0 0.0069475 2 68899 41.218 37.144 1 1.6738 1.3314 0 2967800 1026100 1941700 7726 1725 2942 3018 12056;12057 12056 EGLEIVK 7 1 0 Unmodified _EGLEIVK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 394.2311 2 394.231636 786.448719 96236.66 0.24102 9.5019E-05 0.053582 2.1124E-05 0.29461 0.00011614 394.231604416317 398.238658556855 51.904 0.85492 51.904 51.464 52.319 0 362 69 8 0 0 0 0.030326 1 28559 68.915 1.9214 1 0.36746 0.43378 0 365370000 269200000 96172000 7727 1476 2943 3019 12058 12058 EGLEIVK 7 1 0 Unmodified _EGLEIVK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 394.2315 2 394.231636 786.448719 95058.21 0.12742 5.0233E-05 -0.12765 -5.0322E-05 -0.00022482 -8.8631E-08 394.231555605615 398.238606101852 58.965 1.0741 58.965 58.58 59.654 0 406 84 8 0 0 0 0.034211 1 29924 62.714 18.103 1 0.32583 0.26431 0 26022000 19612000 6411000 7728 1476 2943 3019 12059 12059 EGLELPEDEEEK 12 1 0 Unmodified _EGLELPEDEEEK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AA5P;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.8306 2 708.822469 1415.63038 72424.24 0.67923 0.00048146 -0.031308 -2.2191E-05 0.64793 0.00045927 708.822416152325 712.829464967655 63.537 1.3966 63.537 62.925 64.322 0 797 131 11 0 0 0 1.1823E-05 5 36674 107.21 107.21 1 2.2292 2.6305 0 356020000 104040000 251980000 7729 379;1348;1799 2944 3020 12060;12061;12062;12063;12064 12063 EGLELPEDEEEK 12 1 0 Unmodified _EGLELPEDEEEK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AA5P;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.8304 2 708.822469 1415.63038 72250.01 0.57401 0.00040687 0.12569 8.9093E-05 0.6997 0.00049596 708.822545605485 712.829633310031 62.529 1.3523 62.529 61.883 63.235 0 752 122 9 0 0 0 1.8864E-12 4 36890 125.48 125.48 1 2.3176 2.7258 0 370500000 112310000 258190000 7730 379;1348;1799 2944 3020 12065;12066;12067;12068 12067 EGLELPEDEEEK 12 1 0 Unmodified _EGLELPEDEEEK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AA5P;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Putative heat shock protein HSP 90-beta 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.8293 2 708.822469 1415.63038 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.776 1 63.776 63.276 64.276 0 0 0 0 0.011861 1 37510 56.013 37.341 1 7731 379;1348;1799 2944 3020 12069 12069 EGLELPEDEEEK 12 1 0 Unmodified _EGLELPEDEEEK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AA5P;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.8205 2 708.822469 1415.63038 72082.08 0.6806 0.00048243 -0.13065 -9.2607E-05 0.54995 0.00038982 708.822479658531 712.82946854542 72.952 1.0866 72.952 72.598 73.685 0 429 77 10 0 0 0 0.022815 2 38391 37.696 37.696 1 1.5255 1.2393 0 28186000 10822000 17364000 7732 379;1348;1799 2944 3020 12070;12071 12071 EGLELPEDEEEK 12 1 0 Unmodified _EGLELPEDEEEK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AA5P;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.8221 2 708.822469 1415.63038 72586.52 0.55979 0.00039679 -0.11698 -8.2921E-05 0.44281 0.00031387 708.822534855323 712.829480005301 73.591 1.2013 73.591 73.09 74.292 7.6294E-06 456 86 8 0 0 0 0.0030957 2 37924 56.916 56.916 1 1.5717 1.2912 0 27833000 11722000 16111000 7733 379;1348;1799 2944 3020 12072;12073 12073 EGLELPEDEEEKK 13 2 0 Unmodified _EGLELPEDEEEKK_ 0 0 1 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AA5P;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Putative heat shock protein HSP 90-beta 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.8865 2 772.86995 1543.72535 NaN NaN NaN 0.079616 6.1533E-05 NaN NaN NaN NaN 47.158 0.44754 47.158 46.99 47.437 0 0 0 0 0.0019683 1 25468 72.652 60.076 1 NaN NaN 0 15195000 0 15195000 7734 379;1348;1799 2945 3021 12074 12074 EGLELPEDEEEKK 13 2 0 Unmodified _EGLELPEDEEEKK_ 0 0 1 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AA5P;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Putative heat shock protein HSP 90-beta 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.9254 3 515.582392 1543.72535 NaN NaN NaN -0.041822 -2.1563E-05 NaN NaN NaN NaN 47.212 0.50406 47.212 46.971 47.475 0 0 0 0 0.0032631 1 25511 51.939 47.322 1 NaN NaN 0 25141000 0 25141000 7735 379;1348;1799 2945 3021 12075 12075 EGLELPEDEEEKK 13 2 0 Unmodified _EGLELPEDEEEKK_ 0 0 1 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0;Q58FF6 B4DMA2;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;EL52;HSP90AA1;HSP90AA5P;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.3726 2 772.86995 1543.72535 69977.64 0.44929 0.00034724 0.14299 0.00011051 0.59228 0.00045776 772.870021316012 780.884215861293 45.954 0.35835 45.954 45.789 46.147 -3.8147E-06 106 30 6 0 0 0 0.014764 2 25245 43.512 43.512 1 2.0848 2.3968 0 24272000 7120100 17152000 7736 379;1348;1799 2945 3021 12076;12077 12077 EGLEYIPLR 9 0 1 Unmodified _EGLEYIPLR_ 0 0 0 Q3LIE7;B7ZAV4;Q15392 Q3LIE7 Q3LIE7 Nbla03646;DHCR24 Delta(24)-sterol reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.3026 2 545.300581 1088.58661 83522.01 0.86046 0.00046921 0.24468 0.00013342 1.1051 0.00060263 545.301018003543 550.304846633805 91.726 0.46558 91.726 91.449 91.915 0 123 37 5 0 0 0 0.002013 1 55563 77.923 77.923 1 2.0974 2.1011 0 16275000 6526500 9748400 7737 1110 2946 3022 12078 12078 EGLEYIPLR 9 0 1 Unmodified _EGLEYIPLR_ 0 0 0 Q3LIE7;B7ZAV4;Q15392 Q3LIE7 Q3LIE7 Nbla03646;DHCR24 Delta(24)-sterol reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.3048 2 545.300581 1088.58661 82380.05 0.78966 0.0004306 0.36978 0.00020164 1.1594 0.00063224 545.301184959724 550.304830903608 90.801 0.66058 90.801 90.416 91.076 0 124 51 4 0 0 0 0.00021282 3 56168 106.04 93.429 1 1.5676 1.5941 0 20455000 8310700 12144000 7738 1110 2946 3022 12079;12080;12081 12081 EGLISQDGSSLEALLR 16 0 1 Unmodified _EGLISQDGSSLEALLR_ 0 0 0 A0A024R582;J3KMZ8;Q92785 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.4465 2 844.446691 1686.87883 67196.91 0.89742 0.00075782 -0.64714 -0.00054648 0.25027 0.00021134 844.94706461072 849.951611268972 118.07 0.70426 118.07 117.79 118.49 -7.6294E-06 168 46 7 0 0 0 0.00015201 2 77476 64.827 56.94 1 0.99924 1.0049 0 11019000 5662000 5356800 7739 174 2947 3023 12082;12083 12083 EGLLAIFK 8 1 0 Unmodified _EGLLAIFK_ 0 0 0 B4DE59;C9JTX4;C9J826;C9JK18;C9JKY1;A0A0S2Z487;A0A024R1X8;P14923;B4DSW9;B4DL06;B4DGU4;B5BU28;A0A024R2Q3;P35222 B4DE59;A0A0S2Z487 B4DE59 JUP;CTNNB1 Junction plakoglobin;Catenin beta-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.2722 2 445.770929 889.527304 NaN NaN NaN -0.14053 -6.2644E-05 NaN NaN NaN NaN 109.62 0.55865 109.62 109.34 109.89 7.6294E-06 0 0 0 0.027494 1 70439 60.799 34.32 1 NaN NaN 0 3690700 3690700 0 7740 964;94 2948 3024 12084 12084 EGLLGLQNLLK 11 1 0 Unmodified _EGLLGLQNLLK_ 0 0 0 B7Z5R7;B7Z4E5;B7Z7Q8;H0Y5T1;F8WA11;Q7Z460 B7Z5R7 B7Z5R7 CLASP1 CLIP-associating protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.3646 2 599.363713 1196.71287 80174.8 0.85139 0.00051029 -0.10865 -6.5122E-05 0.74273 0.00044517 599.363609365499 603.370595096218 120.56 0.37393 120.56 120.34 120.71 0 103 26 6 0 0 0 0.00063346 2 77688 73.665 46.535 1 1.0007 1.0149 0 5969700 3248600 2721000 7741 1090 2949 3025 12085;12086 12085 EGLLGLQNLLK 11 1 0 Unmodified _EGLLGLQNLLK_ 0 0 0 B7Z5R7;B7Z4E5;B7Z7Q8;H0Y5T1;F8WA11;Q7Z460 B7Z5R7 B7Z5R7 CLASP1 CLIP-associating protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.3638 2 599.363713 1196.71287 80781.03 1.0192 0.00061089 -0.14304 -8.5731E-05 0.87619 0.00052516 599.363453575319 603.370703082725 119.99 0.38756 119.99 119.78 120.16 0 105 28 5 0 0 0 0.00018556 2 79204 93.429 66.174 1 0.72798 0.73543 0 8464900 5039000 3425900 7742 1090 2949 3025 12087;12088 12087 EGLNLPSQLAHR 12 0 1 Unmodified _EGLNLPSQLAHR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2;A0A087X270 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.5762 3 445.577359 1333.71025 91951.98 0.11084 4.939E-05 -0.051197 -2.2812E-05 0.059648 2.6578E-05 445.577244781979 448.91335271122 68.274 0.34414 68.274 68.123 68.467 7.6294E-06 94 29 5 0 0 0 0.0099994 1 39586 27.664 15.037 1 1.3558 1.3825 0 9937900 3863500 6074400 7743 391 2950 3026 12089 12089 EGLNLPSQLAHR 12 0 1 Unmodified _EGLNLPSQLAHR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2;A0A087X270 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8639 2 667.8624 1333.71025 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.383 1 68.383 67.883 68.883 0 0 0 0 0.023417 1 39633 49.5 2.6093 1 7744 391 2950 3026 12090 12090 EGLNLPSQLAHR 12 0 1 Unmodified _EGLNLPSQLAHR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2;A0A087X270 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.9135 3 445.577359 1333.71025 91871.89 -0.11908 -5.3059E-05 -0.17697 -7.8852E-05 -0.29605 -0.00013191 446.245392484929 448.913356984359 66.895 0.33966 66.895 66.748 67.088 0 131 29 7 0 0 0 0.022599 1 39575 19.781 16.942 1 0.96849 0.9499 0 13968000 6716000 7252000 7745 391 2950 3026 12091 12091 EGLNLPSQLAHR 12 0 1 Unmodified _EGLNLPSQLAHR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2;A0A087X270 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.8663 2 667.8624 1333.71025 NaN NaN NaN 0.2875 0.00019201 NaN NaN NaN NaN 66.856 0.2781 66.856 66.712 66.99 0 0 0 0 0.0032206 1 39541 66.19 21.029 1 NaN NaN 0 2991200 0 2991200 7746 391 2950 3026 12092 12092 EGLNLPSQLAHR 12 0 1 Unmodified _EGLNLPSQLAHR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2;A0A087X270 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8621 2 667.8624 1333.71025 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.88 1 66.88 66.38 67.38 0 0 0 0 0.0033635 1 39567 66.758 18.475 1 7747 391 2950 3026 12093 12093 EGLPEDGTLYR 11 0 1 Unmodified _EGLPEDGTLYR_ 0 0 0 Q8WUA4;Q53QN0;A0A087WZD8 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.3075 2 625.306592 1248.59863 76716.39 0.63787 0.00039886 -0.037934 -2.372E-05 0.59993 0.00037514 625.306466747266 630.310453611216 73.915 0.59187 73.915 73.685 74.277 0 160 39 6 0 0 0 0.038119 1 39173 36.334 31.368 1 1.4136 1.181 0 3321200 1288600 2032600 7748 1938 2951 3027 12094 12094 EGLPEDGTLYR 11 0 1 Unmodified _EGLPEDGTLYR_ 0 0 0 Q8WUA4;Q53QN0;A0A087WZD8 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.3068 2 625.306592 1248.59863 75865.86 0.49565 0.00030994 0.045063 2.8178E-05 0.54072 0.00033811 625.307086708817 630.310254519679 74.433 0.57592 74.433 74.17 74.746 0 148 36 6 0 0 0 0.049249 1 38679 34.803 34.803 1 1.2987 1.1116 0 3293500 1452800 1840700 7749 1938 2951 3027 12095 12095 EGLPVALDK 9 1 0 Unmodified _EGLPVALDK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2684 2 471.26875 940.522947 89818.38 0.1869 8.8079E-05 -0.1387 -6.5367E-05 0.048194 2.2712E-05 471.268467734467 475.275815736976 69.279 0.77106 69.279 68.923 69.694 0 248 64 5 0 0 0 0.019158 2 41379 51.415 41.427 1 1.0851 1.1653 0 37401000 18090000 19310000 7750 1793 2952 3028 12096;12097 12097 EGLSACQQSGFPAVLSSK 18 1 0 Unmodified _EGLSACQQSGFPAVLSSK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 933.4586 2 933.456733 1864.89891 NaN NaN NaN 0.37899 0.00035377 NaN NaN NaN NaN 90.376 0.36261 90.376 90.11 90.473 0 0 0 0 0.034025 1 55749 33.782 27.749 1 NaN NaN 0 8908800 8908800 0 7751 1233 2953 3029 12098 12098 EGLSACQQSGFPAVLSSK 18 1 0 Unmodified _EGLSACQQSGFPAVLSSK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 937.9662 2 933.456733 1864.89891 62973.02 0.63577 0.00059346 -0.2683 -0.00025045 0.36746 0.00034301 933.456761158877 937.46393645372 104.42 0.61818 104.42 104.12 104.74 0 253 39 9 0 0 0 0.00019459 1 59375 48.112 42.505 1 1.4272 1.1305 0 10373000 4772800 5600200 7752 1233 2953 3029 12099 12099 EGLSACQQSGFPAVLSSK 18 1 0 Unmodified _EGLSACQQSGFPAVLSSK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 937.9658 2 933.456733 1864.89891 62114.92 0.39717 0.00037075 0.12712 0.00011866 0.5243 0.00048941 933.958238852821 937.464398199481 104.22 0.61958 104.22 103.93 104.55 0 258 40 9 0 0 0 0.0006664 1 58357 42.317 42.317 1 1.4656 1.2051 0 9958300 3761700 6196600 7753 1233 2953 3029 12100 12100 EGLTSIEEVTK 11 1 0 Unmodified _EGLTSIEEVTK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.324 2 603.316625 1204.6187 77880.13 0.57701 0.00034812 0.23648 0.00014267 0.81349 0.00049079 603.316659387174 607.323800869294 71.108 1.0064 71.108 70.79 71.796 0 363 85 7 0 0 0 0.0003695 2 41435 83.869 72.841 1 1.8037 2.0408 0 86997000 32228000 54769000 7754 1754 2954 3030 12101;12102 12101 EGLTSIEEVTK 11 1 0 Unmodified _EGLTSIEEVTK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.3237 2 603.316625 1204.6187 78010.7 0.54013 0.00032587 0.0062574 3.7752E-06 0.54639 0.00032965 603.316624609559 607.323677483595 69.944 0.93018 69.944 69.694 70.624 0 263 75 4 0 0 0 0.001099 2 41609 70.1 60.064 1 1.8035 2.0174 0 108470000 38385000 70082000 7755 1754 2954 3030 12103;12104 12103 EGLTSIEEVTK 11 1 0 Unmodified _EGLTSIEEVTK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.3245 2 603.316625 1204.6187 76975.23 0.51576 0.00031116 0.18914 0.00011411 0.70489 0.00042527 603.316389131273 607.323728596048 81.801 0.9525 81.801 81.212 82.164 0 138 51 4 0 0 0 0.0013092 1 43520 68.49 50.179 1 2.8374 2.3089 0 7160100 1782100 5378000 7756 1754 2954 3030 12105 12105 EGLVPLSVSSGK 12 1 0 Unmodified _EGLVPLSVSSGK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.838 2 586.829703 1171.64485 NaN NaN NaN 0.88703 0.00052053 NaN NaN NaN NaN 79.227 0.42563 79.227 78.972 79.397 7.6294E-06 0 0 0 0.025556 1 48060 49.189 23.084 1 NaN NaN 0 8106900 0 8106900 7757 1795 2955 3031 12106 12106 EGMFNNANVLFK 12 1 0 Oxidation (M) _EGM(ox)FNNANVLFK_ EGM(1)FNNANVLFK EGM(126.41)FNNANVLFK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.3373 2 700.337369 1398.66019 71831.23 0.85948 0.00060193 -0.46725 -0.00032723 0.39224 0.0002747 700.337259929989 704.344358225724 81.924 0.54597 81.924 81.666 82.212 0 220 46 6 0 0 0 8.4556E-13 2 48850 126.41 115.26 1 1.2763 1.4095 0 56833000 22330000 34503000 7758 69 2956 3032 12107;12108 12108 40 EGMFNNANVLFK 12 1 0 Oxidation (M) _EGM(ox)FNNANVLFK_ EGM(1)FNNANVLFK EGM(112.84)FNNANVLFK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.337 2 700.337369 1398.66019 69435.52 0.97546 0.00068315 -0.43038 -0.00030141 0.54507 0.00038174 700.337106826317 704.344288753824 80.931 0.5894 80.931 80.591 81.181 0 285 48 8 0 0 0 2.7032E-08 2 49305 112.84 101.64 1 1.257 1.409 0 79785000 37220000 42566000 7759 69 2956 3032 12109;12110 12110 40 EGMFNNANVLFK 12 1 0 Oxidation (M) _EGM(ox)FNNANVLFK_ EGM(1)FNNANVLFK EGM(112.84)FNNANVLFK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.3444 2 700.337369 1398.66019 68265.92 0.90712 0.00063529 -0.45384 -0.00031784 0.45328 0.00031745 700.337486526177 704.344459444203 81.381 0.58264 81.381 81.133 81.715 0 279 48 8 0 0 0 2.7032E-08 1 49814 112.84 112.84 1 1.2212 1.3962 0 158720000 75069000 83651000 7760 69 2956 3032 12111 12111 40 EGMFNNANVLFK 12 1 0 Oxidation (M) _EGM(ox)FNNANVLFK_ EGM(1)FNNANVLFK EGM(72.88)FNNANVLFK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.3449 2 700.337369 1398.66019 71666.3 0.65959 0.00046193 -0.68697 -0.00048111 -0.027388 -1.9181E-05 700.337183175463 704.344491224465 93.736 0.8152 93.736 93.187 94.002 0 264 54 8 0 0 0 0.0001503 2 52341 72.879 72.879 1 1.2086 0.96333 0 9662700 4345000 5317600 7761 69 2956 3032 12112;12113 12112 40 EGMFNNANVLFK 12 1 0 Oxidation (M) _EGM(ox)FNNANVLFK_ EGM(1)FNNANVLFK EGM(65.22)FNNANVLFK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.8749 2 700.337369 1398.66019 72367.32 0.69225 0.00048481 -0.48752 -0.00034143 0.20473 0.00014338 700.337341628847 704.344333387541 94.247 0.73163 94.247 93.934 94.666 0 257 43 10 0 0 0 0.0090863 1 52771 65.224 53.177 1 1.4032 1.0876 0 13616000 6010500 7605400 7762 69 2956 3032 12114 12114 40 EGMFNNANVLFK 12 1 0 Oxidation (M) _EGM(ox)FNNANVLFK_ EGM(1)FNNANVLFK EGM(78.93)FNNANVLFK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.3444 2 700.337369 1398.66019 71812.66 0.56534 0.00039593 -0.51225 -0.00035875 0.053091 3.7182E-05 700.336988702358 704.344439606525 93.597 0.69238 93.597 93.169 93.861 7.6294E-06 229 46 7 0 0 0 9.7325E-05 2 51418 78.934 78.934 1 1.266 1.0388 0 9002600 3420000 5582500 7763 69 2956 3032 12115;12116 12116 40 EGMFNNANVLFK 12 1 0 Oxidation (M) _EGM(ox)FNNANVLFK_ EGM(1)FNNANVLFK EGM(56.43)FNNANVLFK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.3759 2 700.337369 1398.66019 70807.96 0.70603 0.00049446 -0.32885 -0.00023031 0.37718 0.00026416 700.337592129796 704.846137606113 94.139 0.61916 94.139 93.833 94.453 0 236 39 8 0 0 0 0.028488 1 51717 56.434 45.283 1 1.1574 0.94998 0 9149400 5225600 3923900 7764 69 2956 3032 12117 12117 40 EGMFNNANVLFK 12 1 0 Unmodified _EGMFNNANVLFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.3474 2 692.339912 1382.66527 72931.23 0.96037 0.0006649 -0.14763 -0.00010221 0.81274 0.00056269 692.340260316284 696.3470360388 113.94 0.60879 113.94 113.6 114.21 0 132 27 8 0 0 0 0.00022668 1 66417 88.37 88.37 1 2.107 1.6798 0 9606500 3281500 6325000 7765 69 2956 3033 12118 12118 EGMFNNANVLFK 12 1 0 Unmodified _EGMFNNANVLFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.3475 2 692.339912 1382.66527 73480.84 0.62174 0.00043046 -0.050232 -3.4777E-05 0.57151 0.00039568 692.340241177419 696.347091837844 113.79 0.72762 113.79 113.3 114.03 0 152 34 7 0 0 0 0.00086156 1 65359 64.711 64.711 1 1.9964 1.6392 0 9293400 2676200 6617200 7766 69 2956 3033 12119 12119 EGMNIVEAMER 11 0 1 2 Oxidation (M) _EGM(ox)NIVEAM(ox)ER_ EGM(1)NIVEAM(1)ER EGM(79.97)NIVEAM(79.97)ER 0 2 0 V9HWF5;A8K486;P62937;B4DM82;B2RE56;Q71V99 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.7946 2 655.789395 1309.56424 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.325 1 29.325 28.825 29.825 0 0 0 0 0.00017436 1 14178 79.974 61.194 1 7767 731 2957 3034 12120 12120 564;565 EGMNIVEAMER 11 0 1 2 Oxidation (M) _EGM(ox)NIVEAM(ox)ER_ EGM(1)NIVEAM(1)ER EGM(84.05)NIVEAM(84.05)ER 0 2 0 V9HWF5;A8K486;P62937;B4DM82;B2RE56;Q71V99 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.7941 2 655.789395 1309.56424 NaN NaN NaN -0.34826 -0.00022838 NaN NaN NaN NaN 29.155 0.1916 29.155 29.049 29.24 0 0 0 0 0.00025263 1 14039 84.054 65.274 1 NaN NaN 0 4052700 0 4052700 7768 731 2957 3034 12121 12121 564;565 EGNEQLTEEER 11 0 1 Unmodified _EGNEQLTEEER_ 0 0 0 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3011 2 667.296953 1332.57935 77787.27 0.008769 5.8515E-06 -0.073254 -4.8882E-05 -0.064485 -4.3031E-05 667.798642160583 672.300944911086 21.983 0.2527 21.983 21.846 22.098 0 50 14 5 0 0 0 0.00022817 2 8116 91.584 76.433 1 1.1167 1.1495 0 6332000 2775900 3556000 7769 1919 2958 3035 12122;12123 12122 EGNGFQEETWR 11 0 1 Unmodified _EGNGFQEETWR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.8007 2 676.796923 1351.57929 74598.08 0.71719 0.00048539 -0.3595 -0.00024331 0.35769 0.00024209 676.796624280408 681.800904607857 51.343 0.83144 51.343 51.08 51.911 -3.8147E-06 231 75 5 0 0 0 0.00036566 1 28286 84.17 74.217 1 1.3323 1.3738 0 24310000 11348000 12962000 7770 1914 2959 3036 12124 12124 EGNGFQEETWR 11 0 1 Unmodified _EGNGFQEETWR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 676.7968 2 676.796923 1351.57929 75586.13 0.63124 0.00042722 0.16639 0.00011261 0.79763 0.00053983 676.797238345027 681.800699346853 50.394 0.67064 50.394 49.883 50.554 0 264 60 6 0 0 0 7.8874E-05 2 28378 98.048 87.677 1 1.258 1.4028 0 43993000 20353000 23641000 7771 1914 2959 3036 12125;12126 12126 EGNGFQEETWR 11 0 1 Unmodified _EGNGFQEETWR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.3043 2 676.796923 1351.57929 73555.8 0.42983 0.00029091 0.15967 0.00010806 0.5895 0.00039897 676.796851236972 681.801154007343 59.322 0.68691 59.322 59.044 59.73 0 290 54 7 0 0 0 0.023264 1 30134 42.336 36.995 1 1.6663 1.4345 0 7404100 2733500 4670600 7772 1914 2959 3036 12127 12127 EGNGFQEETWR 11 0 1 Unmodified _EGNGFQEETWR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.8025 2 676.796923 1351.57929 73951.66 0.5309 0.00035931 0.13667 9.25E-05 0.66758 0.00045181 676.797070266187 681.800964100846 60.034 0.70875 60.034 59.559 60.268 0 272 51 7 0 0 0 0.036293 1 29779 36.585 31.272 1 1.7189 1.4292 0 6043200 2127100 3916100 7773 1914 2959 3036 12128 12128 EGNQEVPFDVPELWYEDEK 19 1 0 Unmodified _EGNQEVPFDVPELWYEDEK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1166.5321 2 1162.02369 2322.03282 NaN NaN NaN 0.10342 0.00012018 NaN NaN NaN NaN 121.72 0.4491 121.72 121.56 122.01 -7.6294E-06 0 0 0 0.00039807 1 80597 55.196 50.727 1 NaN NaN 0 4807800 0 4807800 7774 1207 2960 3037 12129 12129 EGNSPSFFNPEEAATVTSYLK 21 1 0 Unmodified _EGNSPSFFNPEEAATVTSYLK_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1144.5405 2 1144.53951 2287.06446 56441.42 0.4569 0.00052294 0.70958 0.00081214 1.1665 0.0013351 1145.04175499447 1149.04966392483 121.62 0.51764 121.62 121.32 121.84 7.6294E-06 134 33 7 0 0 0 0.004797 1 78675 27.335 22.534 1 1.3594 1.4179 0 12245000 4765800 7479300 7775 1102 2961 3038 12130 12130 EGNSPSFFNPEEAATVTSYLK 21 1 0 Unmodified _EGNSPSFFNPEEAATVTSYLK_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1145.0409 2 1144.53951 2287.06446 56473.13 0.4771 0.00054605 0.63587 0.00072778 1.113 0.0012738 1145.042307276 1149.05092768392 121.21 0.62978 121.21 120.76 121.39 -7.6294E-06 114 38 6 0 0 0 9.1542E-05 2 80254 39.005 34.375 1 1.2047 1.2315 0 17354000 7969000 9384600 7776 1102 2961 3038 12131;12132 12132 EGNVPNIIIAGPPGTGK 17 1 0 Unmodified _EGNVPNIIIAGPPGTGK_ 0 0 0 Q75MT5;B5BUD2;P35250 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.4567 2 817.449037 1632.88352 69200.74 0.72952 0.00059635 0.019747 1.6142E-05 0.74927 0.00061249 817.448860128208 821.45595378848 94.346 0.52821 94.346 94.115 94.644 -7.6294E-06 203 49 6 0 0 0 6.9462E-05 1 57258 70.622 60.976 1 1.0693 1.1178 0 30015000 18663000 11353000 7777 1079 2962 3039 12133 12133 EGNVPNIIIAGPPGTGK 17 1 0 Unmodified _EGNVPNIIIAGPPGTGK_ 0 0 0 Q75MT5;B5BUD2;P35250 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.4567 2 817.449037 1632.88352 68103.3 0.66182 0.00054101 -0.087966 -7.1908E-05 0.57386 0.0004691 817.950685171302 821.4558973172 93.665 0.56474 93.665 93.339 93.904 0 235 50 6 0 0 0 0.00010821 1 57998 59.185 53.461 1 1.1555 1.2513 0 38790000 18912000 19878000 7778 1079 2962 3039 12134 12134 EGNVPNIIIAGPPGTGK 17 1 0 Unmodified _EGNVPNIIIAGPPGTGK_ 0 0 0 Q75MT5;B5BUD2;P35250 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 821.4573 2 817.449037 1632.88352 69009.23 0.80489 0.00065795 0.002515 2.0559E-06 0.8074 0.00066001 817.950531891542 821.456052326124 107.53 0.46521 107.53 107.28 107.74 0 136 26 6 0 0 0 0.0010773 2 61544 43.382 39.958 1 1.0296 0.81924 0 6670800 3486000 3184900 7779 1079 2962 3039 12135;12136 12136 EGNVPNIIIAGPPGTGK 17 1 0 Unmodified _EGNVPNIIIAGPPGTGK_ 0 0 0 Q75MT5;B5BUD2;P35250 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 821.4561 2 817.449037 1632.88352 69087.16 0.72136 0.00058968 -0.040645 -3.3225E-05 0.68072 0.00055645 817.950808833942 821.455896853107 107.41 0.5146 107.41 107.11 107.63 0 202 36 7 0 0 0 0.0019827 2 60550 37.013 33.691 1 0.99066 0.80791 0 5764300 3270300 2494000 7780 1079 2962 3039 12137;12138 12138 EGPEGFAR 8 0 1 Unmodified _EGPEGFAR_ 0 0 0 A0A024R5C5;P11498 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.7106 2 431.706317 861.398081 93796.7 0.093349 4.03E-05 0.16779 7.2437E-05 0.26114 0.00011274 431.706513983761 436.710300303515 26.583 0.28938 26.583 26.433 26.723 -1.9073E-06 41 14 4 0 0 0 0.027663 1 11984 53.754 9.9399 1 2.0661 2.0813 0 10680000 2740700 7939800 7781 176 2963 3040 12139 12139 EGPLCDELIR 10 0 1 Unmodified _EGPLCDELIR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;K7EP67;K7EJ74 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.2984 2 601.297713 1200.58087 NaN NaN NaN -0.84229 -0.00050647 NaN NaN NaN NaN 88.534 0.69288 88.534 88.071 88.763 0 0 0 0 0.052973 1 47933 45.997 34.149 1 NaN NaN 0 966870 966870 0 7782 794 2964 3041 12140 12140 EGPSGSGDSQLSASSR 16 0 1 Unmodified _EGPSGSGDSQLSASSR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.8479 2 761.342423 1520.67029 70459.88 0.52346 0.00039853 -0.05972 -4.5467E-05 0.46374 0.00035306 761.342617988994 766.346589304107 21.22 0.31359 21.22 21.075 21.389 1.9073E-06 46 13 6 0 0 0 3.0547E-06 2 7582 90.412 79.66 1 0.94415 0.94962 0 9305100 4509000 4796100 7783 1699 2965 3042 12141;12142 12142 EGPSGSGDSQLSASSR 16 0 1 Unmodified _EGPSGSGDSQLSASSR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.347 2 761.342423 1520.67029 70381.88 0.52729 0.00040145 0.073122 5.5671E-05 0.60042 0.00045712 761.342396930859 766.346478211584 21.148 0.34271 21.148 20.98 21.322 0 78 16 8 0 0 0 1.9966E-17 2 7335 128.54 102.92 1 0.9625 0.95865 0 11721000 5875100 5845800 7784 1699 2965 3042 12143;12144 12144 EGPSGSGDSQLSASSR 16 0 1 Unmodified _EGPSGSGDSQLSASSR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 766.3475 2 761.342423 1520.67029 70337.6 0.45375 0.00034546 -0.18252 -0.00013896 0.27123 0.0002065 761.341060993062 766.346696855434 23.515 0.35099 23.515 23.329 23.68 0 69 17 5 0 0 0 0.00086008 1 7987 47.666 41.282 1 1.8768 1.6158 0 2672200 912390 1759800 7785 1699 2965 3042 12145 12145 EGPSGSGDSQLSASSR 16 0 1 Unmodified _EGPSGSGDSQLSASSR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.3467 2 761.342423 1520.67029 71362.91 0.52811 0.00040208 -0.12527 -9.5371E-05 0.40285 0.0003067 761.342051741896 766.346405583733 23.557 0.31886 23.557 23.377 23.696 0 57 16 5 0 0 0 0.00288 1 7511 39.005 35.118 1 1.7127 1.516 0 1908600 671280 1237300 7786 1699 2965 3042 12146 12146 EGPVQFEEDPFGLDK 15 1 0 Unmodified _EGPVQFEEDPFGLDK_ 0 0 0 B7Z9X2;B4DY36;A0A024R6E3;Q6I9S2;Q13573;G3V4X8;Q9ULA6 B7Z9X2 B7Z9X2 SNW1 SNW domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 853.8997 2 853.899042 1705.78353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.29 1 107.29 106.79 107.79 0 0 0 0 0.054654 1 68485 38.634 32.394 1 7787 203 2966 3043 12147 12147 EGPYSISVLYGDEEVPR 17 0 1 Unmodified _EGPYSISVLYGDEEVPR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.9678 2 955.462538 1908.91052 61725.67 0.67687 0.00064672 -0.71257 -0.00068083 -0.035701 -3.4111E-05 955.964014681975 960.466861540664 106.07 0.53986 106.07 105.75 106.29 0 195 38 7 0 0 0 0.0016994 2 65694 39.006 32.819 1 1.4556 1.4672 0 15657000 7227100 8429800 7788 1504 2967 3044 12148;12149 12149 EGPYSISVLYGDEEVPR 17 0 1 Unmodified _EGPYSISVLYGDEEVPR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 960.4677 2 955.462538 1908.91052 61550.34 0.5255 0.0005021 -0.4835 -0.00046197 0.042 4.0129E-05 955.964217514773 960.466528939495 105.49 0.47211 105.49 105.23 105.7 0 171 32 7 0 0 0 0.00012979 2 66872 56.951 40.009 1 1.2118 1.2146 0 18176000 8663400 9512600 7789 1504 2967 3044 12150;12151 12150 EGPYSISVLYGDEEVPR 17 0 1 Unmodified _EGPYSISVLYGDEEVPR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 960.468 2 955.462538 1908.91052 NaN NaN NaN -1.5693 -0.0014994 NaN NaN NaN NaN 117.29 0.79212 117.29 117 117.79 0 0 0 0 0.010052 1 69077 43.03 30.972 1 NaN NaN 0 5222600 0 5222600 7790 1504 2967 3044 12152 12152 EGQGEGETQEAAAAAAAAR 19 0 1 Unmodified _EGQGEGETQEAAAAAAAAR_ 0 0 0 P58107 P58107 P58107 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.4158 2 894.411368 1786.80818 64484.74 0.48834 0.00043677 0.36274 0.00032444 0.85108 0.00076121 894.411497410606 899.415887853272 43.265 0.72083 43.265 42.961 43.681 3.8147E-06 324 57 7 0 0 0 3.2041E-108 2 23053 223.46 209.65 1 2.2272 2.4688 0 65489000 20176000 45313000 7791 1622 2968 3045 12153;12154 12154 EGQGEGETQEAAAAAAAAR 19 0 1 Unmodified _EGQGEGETQEAAAAAAAAR_ 0 0 0 P58107 P58107 P58107 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.9169 2 894.411368 1786.80818 64047.13 0.77743 0.00069534 -0.049352 -4.4141E-05 0.72807 0.0006512 894.411092150663 899.415544631915 42.585 0.63699 42.585 42.258 42.895 0 311 51 8 0 0 0 8.0298E-51 2 22805 164.64 150.83 1 2.1963 2.5062 0 93267000 27969000 65298000 7792 1622 2968 3045 12155;12156 12155 EGQGEGETQEAAAAAAAAR 19 0 1 Unmodified _EGQGEGETQEAAAAAAAAR_ 0 0 0 P58107 P58107 P58107 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 899.4163 2 894.411368 1786.80818 64030.89 0.14659 0.00013111 0.16134 0.0001443 0.30793 0.00027542 894.410828418948 899.41587571467 51.498 0.80215 51.498 51.051 51.853 0 330 58 9 0 0 0 4.1864E-17 1 25347 122.1 110.88 1 2.1804 1.7795 0 14592000 4544900 10048000 7793 1622 2968 3045 12157 12157 EGQGEGETQEAAAAAAAAR 19 0 1 Unmodified _EGQGEGETQEAAAAAAAAR_ 0 0 0 P58107 P58107 P58107 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 899.4165 2 894.411368 1786.80818 64464.77 0.02042 1.8264E-05 0.36934 0.00033034 0.38976 0.00034861 894.411689637769 899.41592424446 52.278 0.67409 52.278 51.927 52.602 0 319 52 8 0 0 0 0.0022211 2 25120 35.118 29.394 1 2.1919 1.7675 0 11217000 3686500 7530500 7794 1622 2968 3045 12158;12159 12158 EGQGEGETQEAAAATAAAR 19 0 1 Unmodified _EGQGEGETQEAAAATAAAR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.4206 2 909.41665 1816.81875 NaN NaN NaN -0.23417 -0.00021296 NaN NaN NaN NaN 34.63 0.2823 34.63 34.487 34.77 0 0 0 0 2.1067E-66 2 17513 169.4 163.36 1 NaN NaN 0 8026200 0 8026200 7795 397;1622 2969 3046 12160;12161 12161 EGRPPEPTPAK 11 1 1 Unmodified _EGRPPEPTPAK_ 0 0 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.8233 2 589.811845 1177.60914 NaN NaN NaN 0.76981 0.00045404 NaN NaN NaN NaN 17.012 0.32272 17.012 16.858 17.181 0 0 0 0 0.0064537 1 4212 90.15 43.992 1 NaN NaN 0 3770000 0 3770000 7796 619 2970 3047 12162 12162 EGRPPEPTPAK 11 1 1 Unmodified _EGRPPEPTPAK_ 0 0 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.8127 2 589.811845 1177.60914 77744.55 1.0103 0.0005959 0.52243 0.00030813 1.5327 0.00090403 589.812050473994 598.823069148582 16.951 0.29593 16.951 16.8 17.096 0 53 10 7 0 0 0 0.001784 1 3977 86.898 71.747 1 0.89339 1.0113 0 16192000 8072500 8119200 7797 619 2970 3047 12163 12163 EGRPSGEAFVELESEDEVK 19 1 1 Unmodified _EGRPSGEAFVELESEDEVK_ 0 0 1 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EN40;D6RDL0 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.6747 3 702.999046 2105.97531 72241.91 0.7605 0.00053463 0.020223 1.4217E-05 0.78072 0.00054884 703.333408415757 709.006523462773 75.884 0.98285 75.884 75.459 76.442 0 528 82 9 0 0 0 9.5059E-13 1 44835 109.72 109.72 1 2.2067 2.6611 0 128960000 38588000 90371000 7798 1231 2971 3048 12164 12164 EGRPSGEAFVELESEDEVK 19 1 1 Unmodified _EGRPSGEAFVELESEDEVK_ 0 0 1 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EN40;D6RDL0 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.0009 3 702.999046 2105.97531 72199.78 0.71889 0.00050538 0.16585 0.00011659 0.88474 0.00062197 703.333370932866 709.00664519476 74.586 1.2448 74.586 73.886 75.131 7.6294E-06 547 107 9 0 0 0 1.7743E-05 1 44698 51.566 51.566 1 2.2726 2.6941 0 256000000 79059000 176950000 7799 1231 2971 3048 12165 12165 EGRPSGEAFVELESEDEVK 19 1 1 Unmodified _EGRPSGEAFVELESEDEVK_ 0 0 1 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EN40;D6RDL0 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1063.5153 2 1053.99493 2105.97531 NaN NaN NaN 1.784 0.0018804 NaN NaN NaN NaN 74.581 0.14786 74.581 74.511 74.658 0 0 0 0 0.00033503 1 44892 67.136 45.885 1 NaN NaN 0 14381000 0 14381000 7800 1231 2971 3048 12166 12166 EGRPSGEAFVELESEDEVK 19 1 1 Unmodified _EGRPSGEAFVELESEDEVK_ 0 0 1 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EN40;D6RDL0 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.3412 3 702.999046 2105.97531 72300.41 0.58114 0.00040854 -0.020142 -1.416E-05 0.561 0.00039438 703.33332046738 709.006512249312 86.982 0.6091 86.982 86.689 87.298 -7.6294E-06 231 34 10 0 0 0 0.00015628 2 47765 43.37 43.37 1 1.5095 1.3151 0 21043000 7602200 13441000 7801 1231 2971 3048 12167;12168 12168 EGRPSGEAFVELESEDEVK 19 1 1 Unmodified _EGRPSGEAFVELESEDEVK_ 0 0 1 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EN40;D6RDL0 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.0002 3 702.999046 2105.97531 72237.09 0.54852 0.00038561 0.083381 5.8617E-05 0.6319 0.00044422 703.333501393154 709.006571275817 87.063 0.62321 87.063 86.755 87.378 7.6294E-06 256 37 10 0 0 0 4.4318E-06 2 46950 73.984 73.984 1 1.5028 1.2734 0 15520000 5518300 10002000 7802 1231 2971 3048 12169;12170 12169 EGRPSGEAFVELESEEEVK 19 1 1 Unmodified _EGRPSGEAFVELESEEEVK_ 0 0 1 P55795;B4DFK9;B4DP00 P55795 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.0134 3 707.670929 2119.99096 71601.93 0.55676 0.00039401 -0.065743 -4.6525E-05 0.49102 0.00034748 708.005284682613 713.678295738353 77.136 0.89503 77.136 76.739 77.634 0 375 76 6 0 0 0 1.1282E-05 2 45513 59.342 55.902 1 0.93243 1.0902 0 31849000 16258000 15591000 7803 1617 2972 3049 12171;12172 12172 EGRPSGEAFVELESEEEVK 19 1 1 Unmodified _EGRPSGEAFVELESEEEVK_ 0 0 1 P55795;B4DFK9;B4DP00 P55795 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.0055 3 707.670929 2119.99096 71798.13 0.51154 0.000362 -0.12371 -8.7545E-05 0.38783 0.00027446 708.005199569596 713.678329966467 75.863 0.82733 75.863 75.491 76.319 0 348 75 6 0 0 0 6.9406E-06 2 45664 67.396 67.396 1 0.93269 1.09 0 49468000 26919000 22549000 7804 1617 2972 3049 12173;12174 12173 EGRPSGEAFVELESEEEVK 19 1 1 Unmodified _EGRPSGEAFVELESEEEVK_ 0 0 1 P55795;B4DFK9;B4DP00 P55795 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.6795 3 707.670929 2119.99096 71945.95 0.84555 0.00059837 -0.2384 -0.00016871 0.60715 0.00042967 708.00503826611 713.678337391667 88.342 0.55247 88.342 88.094 88.647 -7.6294E-06 231 32 9 0 0 0 6.4756E-05 3 48676 47.499 43.719 1 0.69814 0.59468 0 9407700 5608500 3799200 7805 1617 2972 3049 12175;12176;12177 12176 EGRPSGEAFVELESEEEVK 19 1 1 Unmodified _EGRPSGEAFVELESEEEVK_ 0 0 1 P55795;B4DFK9;B4DP00 P55795 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.6791 3 707.670929 2119.99096 72293.42 0.49399 0.00034958 0.096534 6.8314E-05 0.59053 0.0004179 707.671058989148 714.012992150138 88.29 0.8474 88.29 88.056 88.903 0 205 49 9 0 0 0 0.00020193 3 47957 41.31 38.103 1 0.73996 0.62273 0 7688400 4411900 3276500 7806 1617 2972 3049 12178;12179;12180 12180 EGSALSHVR 9 0 1 Unmodified _EGSALSHVR_ 0 0 0 B4DUG4;K7ELG9;Q3MHD2 B4DUG4 B4DUG4 LSM12 Protein LSM12 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.2562 2 478.251423 954.488293 NaN NaN NaN 1.559 0.00074559 NaN NaN NaN NaN 18.702 0.234 18.702 18.572 18.806 0 0 0 0 0.0015256 1 5593 85.666 58.179 1 NaN NaN 0 6040400 0 6040400 7807 1038 2973 3050 12181 12181 EGSALSHVR 9 0 1 Unmodified _EGSALSHVR_ 0 0 0 B4DUG4;K7ELG9;Q3MHD2 B4DUG4 B4DUG4 LSM12 Protein LSM12 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.2552 2 478.251423 954.488293 84322.58 0.19301 9.2308E-05 0.17644 8.4384E-05 0.36945 0.00017669 478.251086229475 483.255720372302 18.726 0.32944 18.726 18.551 18.881 0 43 22 4 0 0 0 0.0033425 1 5378 72.038 72.038 1 1.8309 1.8211 0 7707500 3164900 4542600 7808 1038 2973 3050 12182 12182 EGSASTEVLR 10 0 1 Unmodified _EGSASTEVLR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.7669 2 524.767103 1047.51965 83280.28 0.38649 0.00020282 -0.18466 -9.6903E-05 0.20183 0.00010591 524.767190843186 529.771398580739 28.995 0.44074 28.995 28.7 29.141 0 87 22 6 0 0 0 3.0008E-08 2 13860 119.86 92.029 1 0.8839 1.0049 0 111970000 57809000 54158000 7809 1411 2974 3051 12183;12184 12183 EGSASTEVLR 10 0 1 Unmodified _EGSASTEVLR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.7699 2 524.767103 1047.51965 NaN NaN NaN -3.2109 -0.001685 NaN NaN NaN NaN 28.262 0.30272 28.262 28.095 28.397 0 0 0 0 2.0941E-05 1 13521 103.8 74.65 1 NaN NaN 0 31345000 0 31345000 7810 1411 2974 3051 12185 12185 EGSASTEVLR 10 0 1 Unmodified _EGSASTEVLR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.7673 2 524.767103 1047.51965 83625.2 0.054653 2.868E-05 -0.3406 -0.00017873 -0.28594 -0.00015005 524.767143419637 529.771693299943 32.624 0.53584 32.624 32.333 32.869 0 98 25 6 0 0 0 0.035164 2 14054 40.724 29.355 1 0.81109 0.68503 0 4821400 2443900 2377500 7811 1411 2974 3051 12186;12187 12186 EGSLVINSK 9 1 0 Unmodified _EGSLVINSK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.7707 2 473.763832 945.513111 87576.52 0.24511 0.00011612 0.028878 1.3681E-05 0.27399 0.00012981 473.763717699483 477.7709454869 33.642 1.1426 33.642 33.162 34.304 0 490 110 8 0 0 0 0.017549 1 16673 52.867 36.394 1 0.73865 0.8505 0 209880000 116130000 93746000 7812 2148 2975 3052 12188 12188 EGSLVINSK 9 1 0 Unmodified _EGSLVINSK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.7711 2 473.763832 945.513111 87638.91 -0.028645 -1.3571E-05 0.37619 0.00017823 0.34755 0.00016466 473.763903015394 477.771089540414 33.041 1.0352 33.041 32.668 33.703 0 499 90 8 0 0 0 7.6829E-06 2 16526 129.72 93.536 1 0.71364 0.82547 0 202550000 120240000 82309000 7813 2148 2975 3052 12189;12190 12190 EGTLIEDSPDFR 12 0 1 Unmodified _EGTLIEDSPDFR_ 0 0 0 A0A087WX60;Q86TC9;A5PKT7 A0A087WX60 A0A087WX60 MYPN Myopalladin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.8311 2 689.827889 1377.64122 74281.59 0.39355 0.00027148 -0.9989 -0.00068907 -0.60535 -0.00041759 690.328310555211 694.831329852961 77.35 0.57297 77.35 77.117 77.69 0 105 46 4 0 0 0 0.0010242 1 45763 62.303 52.071 1 1.9432 1.9763 0 7288800 3260500 4028300 7814 429 2976 3053 12191 12191 EGTLTQVPLAPPPPGAPPSPAPAR 24 0 1 Unmodified _EGTLTQVPLAPPPPGAPPSPAPAR_ 0 0 0 P48634;B4DLY2 P48634 P48634 PRRC2A Protein PRRC2A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1165.1356 2 1159.62879 2317.24303 NaN NaN NaN 0.17945 0.00020809 NaN NaN NaN NaN 101.53 0.22149 101.53 101.42 101.64 0 0 0 0 0.011737 1 62469 29.733 10.155 1 NaN NaN 0 3402200 0 3402200 7815 1576 2977 3054 12192 12192 EGTSVLEHTSDGFPENK 17 1 0 Unmodified _EGTSVLEHTSDGFPENK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.2872 3 616.286639 1845.83809 77241.76 0.21662 0.0001335 0.081428 5.0183E-05 0.29805 0.00018368 616.286684748575 618.958034786102 52.878 0.67162 52.878 52.545 53.216 3.8147E-06 358 51 10 0 0 0 0.00038288 2 29333 35.176 35.176 1 0.96781 1.112 0 201600000 99895000 101710000 7816 1936 2978 3055 12193;12194 12194 EGTSVLEHTSDGFPENK 17 1 0 Unmodified _EGTSVLEHTSDGFPENK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.287 3 616.286639 1845.83809 76938.66 0.1733 0.0001068 0.075495 4.6527E-05 0.24879 0.00015333 616.621056786331 618.958084590284 51.74 0.797 51.74 51.369 52.166 -3.8147E-06 455 62 9 0 0 0 1.7479E-09 2 29225 83.418 83.418 1 0.97139 1.1175 0 175570000 87218000 88348000 7817 1936 2978 3055 12195;12196 12195 EGTSVLEHTSDGFPENK 17 1 0 Unmodified _EGTSVLEHTSDGFPENK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.6218 3 616.286639 1845.83809 77816.98 0.29805 0.00018368 0.15949 9.8293E-05 0.45754 0.00028197 616.286862049085 618.958091904141 62.343 1.0331 62.343 61.807 62.84 0 465 74 10 0 0 0 0.046595 2 31225 13.627 13.627 1 1.2561 1.0095 0 16693000 7655800 9037000 7818 1936 2978 3055 12197;12198 12198 EGTYDGSWALADVMSQLK 18 1 0 Unmodified _EGTYDGSWALADVMSQLK_ 0 0 0 B3GQE6;Q3MI07;A0A087WYH5;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.9639 2 985.961848 1969.90914 NaN NaN NaN -0.30492 -0.00030064 NaN NaN NaN NaN 127.37 0.20839 127.37 127.29 127.5 0 0 0 0 0.00064518 1 82968 56.569 48.056 1 NaN NaN 0 2068800 2068800 0 7819 899;1099 2979 3056 12199 12199 EGVDESFIK 9 1 0 Unmodified _EGVDESFIK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.2527 2 512.253297 1022.49204 84692.53 0.64152 0.00032862 0.27647 0.00014162 0.91798 0.00047024 512.25329964866 516.260483881025 58.492 0.58103 58.492 58.171 58.753 0 202 47 6 0 0 0 0.00022612 1 33880 105.57 61.121 1 0.96883 1.0828 0 98107000 52992000 45114000 7820 897 2980 3057 12200 12200 EGVDESFIK 9 1 0 Unmodified _EGVDESFIK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.2603 2 512.253297 1022.49204 83100.98 0.35598 0.00018235 -0.30703 -0.00015728 0.048955 2.5077E-05 512.25323127325 516.260270003664 68.639 0.87514 68.639 68.289 69.165 0 291 64 6 0 0 0 0.0034791 1 35915 71.692 43.474 1 1.2199 0.94693 0 14480000 6086400 8393200 7821 897 2980 3057 12201 12201 EGVDESFIK 9 1 0 Unmodified _EGVDESFIK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.2605 2 512.253297 1022.49204 84163.33 0.34013 0.00017423 -0.27215 -0.00013941 0.067984 3.4825E-05 512.253119713163 516.260239250153 69.167 0.77019 69.167 68.801 69.571 0 254 53 7 0 0 0 0.0036023 1 35394 71.379 40.15 1 1.2471 1.0186 0 12708000 5911600 6796800 7822 897 2980 3057 12202 12202 EGVEHQLR 8 0 1 Unmodified _EGVEHQLR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.2514 2 484.251423 966.488293 84876.15 -0.15798 -7.6501E-05 0.23306 0.00011286 0.075081 3.6358E-05 484.251497908821 489.255642558602 17.328 0.79229 17.328 17.047 17.84 0 116 26 9 0 0 0 3.097E-14 2 4504 171.38 75.194 1 0.99341 1.1725 0 247890000 118860000 129030000 7823 881;1967 2981 3058 12203;12204 12204 EGVEHQLR 8 0 1 Unmodified _EGVEHQLR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 323.17 3 323.170041 966.488293 104151 -0.16857 -5.4477E-05 0.39329 0.0001271 0.22472 7.2622E-05 323.170104194365 326.506142416957 17.329 0.56834 17.329 17.181 17.749 0 73 19 6 0 0 0 0.0040881 1 4532 56.547 0.87074 1 0.9544 1.0614 0 75722000 37048000 38674000 7824 881;1967 2981 3058 12205 12205 EGVHGGLINK 10 1 0 Unmodified _EGVHGGLINK_ 0 0 0 P07737;K7EJ44 P07737 P07737 PFN1 Profilin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.29 2 512.282723 1022.55089 NaN NaN NaN 0.48703 0.0002495 NaN NaN NaN NaN 22.658 0.32116 22.658 22.485 22.806 0 0 0 0 2.0575E-05 1 8639 103.83 52.046 1 NaN NaN 0 19710000 0 19710000 7825 1453 2982 3059 12206 12206 EGVVGPELHHK 11 1 0 Unmodified _EGVVGPELHHK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 401.2159 3 401.21565 1200.62512 93702.39 -0.007733 -3.1026E-06 -0.27234 -0.00010927 -0.28008 -0.00011237 401.21558959088 403.886684061361 22.197 0.3658 22.197 22.002 22.368 -1.9073E-06 71 20 6 0 0 0 0.024272 1 8361 30.729 25.681 1 0.87842 0.93218 0 15772000 7703800 8068200 7826 1754 2983 3060 12207 12207 EGVVGPELHHK 11 1 0 Unmodified _EGVVGPELHHK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3205 2 601.319837 1200.62512 78282.38 0.43988 0.00026451 -0.095192 -5.7241E-05 0.34469 0.00020727 601.319565351815 605.327022205937 21.074 0.27571 21.074 20.927 21.203 0 45 14 4 0 0 0 0.00098909 1 7257 74.92 56.48 1 1.4747 1.5514 0 23886000 10147000 13739000 7827 1754 2983 3060 12208 12208 EGVVGPELHHK 11 1 0 Unmodified _EGVVGPELHHK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.2155 3 401.21565 1200.62512 95562.62 -0.011195 -4.4914E-06 0.88047 0.00035326 0.86928 0.00034877 401.215586914643 403.887426788728 21.073 0.35775 21.073 20.94 21.297 1.9073E-06 70 17 5 0 0 0 0.024272 1 7304 30.729 26.213 1 1.2364 1.2609 0 31067000 13468000 17599000 7828 1754 2983 3060 12209 12209 EGVVGPELHHK 11 1 0 Unmodified _EGVVGPELHHK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.3271 2 601.319837 1200.62512 80435.96 0.3302 0.00019856 0.35953 0.00021619 0.68973 0.00041475 601.319908714905 605.327048879328 23.007 0.27687 23.007 22.869 23.146 0 34 10 5 0 0 0 0.051215 1 7615 34.532 34.532 1 2.0124 1.6833 0 1269500 432290 837170 7829 1754 2983 3060 12210 12210 EGYGGFR 7 0 1 Unmodified _EGYGGFR_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.1824 2 393.182478 784.350402 95176.98 0.21191 8.3321E-05 0.30747 0.00012089 0.51938 0.00020421 393.182485626011 398.186623330282 29.117 0.30692 29.117 28.924 29.231 0 73 16 6 0 0 0 0.026905 1 14013 82.263 13.623 1 1.1067 1.2839 0 173700000 81281000 92415000 7830 2065 2984 3061 12211 12211 EGYGGFR 7 0 1 Unmodified _EGYGGFR_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.182 2 393.182478 784.350402 95184.41 0.34953 0.00013743 -0.10013 -3.9371E-05 0.2494 9.8058E-05 393.182321570245 398.186462900185 28.379 0.32708 28.379 28.235 28.562 -1.9073E-06 100 23 6 0 0 0 0.026934 1 13558 83.087 14.448 1 0.99472 1.1412 0 80855000 41124000 39731000 7831 2065 2984 3061 12212 12212 EGYNNPPISGENLIGLSR 18 0 1 Unmodified _EGYNNPPISGENLIGLSR_ 0 0 0 Q9Y5Q8;Q5T7U1;Q5T7U0;Q5T7U4;B7Z1V3 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.4926 2 965.486879 1928.9592 62996.26 0.26286 0.00025379 0.41638 0.00040201 0.67924 0.0006558 965.988331640476 970.992408076778 101.67 0.4476 101.67 101.45 101.89 0 135 33 7 0 0 0 0.001018 1 62430 54.276 44.742 1 1.0568 1.1072 0 10919000 5189300 5729900 7832 2149 2985 3062 12213 12213 EGYNNPPISGENLIGLSR 18 0 1 Unmodified _EGYNNPPISGENLIGLSR_ 0 0 0 Q9Y5Q8;Q5T7U1;Q5T7U0;Q5T7U4;B7Z1V3 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 965.989 2 965.486879 1928.9592 63135.82 0.3301 0.00031871 -0.041734 -4.0293E-05 0.28837 0.00027842 965.486623150286 970.491086431236 101.06 0.48695 101.06 100.78 101.26 7.6294E-06 162 37 6 0 0 0 0.00021062 2 63465 47.915 47.915 1 1.0144 1.0017 0 12741000 5792200 6948300 7833 2149 2985 3062 12214;12215 12215 EGYNNPPISGENLIGLSR 18 0 1 Unmodified _EGYNNPPISGENLIGLSR_ 0 0 0 Q9Y5Q8;Q5T7U1;Q5T7U0;Q5T7U4;B7Z1V3 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.4913 2 965.486879 1928.9592 NaN NaN NaN 0.44118 0.00042595 NaN NaN NaN NaN 113.68 0.45651 113.68 113.47 113.93 -7.6294E-06 0 0 0 0.03303 1 65374 34.101 28.717 1 NaN NaN 0 2891400 0 2891400 7834 2149 2985 3062 12216 12216 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.8748 2 657.874445 1313.73434 74596.63 0.94933 0.00062454 -0.53953 -0.00035495 0.40979 0.00026959 657.873901644463 661.881251775855 84.318 2.992 84.318 83.206 86.198 0 1270 247 10 0 0 0 1.2393E-73 6 50503 218.49 218.49 1 2.351 2.8295 0 1272600000 394360000 878280000 7835 1658;1790 2986 3063 12217;12218;12219;12220;12221;12222 12220 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.5905 3 438.918722 1313.73434 91825.64 0.41695 0.00018301 -0.24383 -0.00010702 0.17313 7.5988E-05 438.918758418316 441.589960337988 84.02 0.4359 84.02 83.824 84.259 7.6294E-06 90 34 5 0 0 0 6.6401E-05 1 50385 65.179 65.179 1 2.2443 2.292 0 28249000 8107900 20141000 7836 1658;1790 2986 3063 12223 12223 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.9195 3 438.918722 1313.73434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.215 1 84.215 83.715 84.715 -7.6294E-06 0 0 0 0.0016615 1 50454 78.548 71.501 1 7837 1658;1790 2986 3063 12224 12224 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.8741 2 657.874445 1313.73434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.455 1 85.455 84.955 85.955 7.6294E-06 0 0 0 0.034412 1 51346 50.452 37.332 1 7838 1658;1790 2986 3063 12225 12225 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.8824 2 657.874445 1313.73434 74570.82 0.93513 0.0006152 0.019433 1.2784E-05 0.95456 0.00062798 657.874630915424 661.881554984127 81.73 0.77293 81.73 81.014 81.787 0 529 66 11 0 0 0 9.2076E-18 2 49541 140.78 140.78 1 2.3659 2.7977 0 1669900000 506840000 1163000000 7839 1658;1790 2986 3063 12226;12227 12226 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.8832 2 657.874445 1313.73434 74257.33 0.73957 0.00048654 0.17359 0.0001142 0.91316 0.00060074 657.874621816996 661.881674694295 81.842 1.7494 81.842 81.766 83.516 0 660 143 10 0 0 0 7.9417E-48 3 50615 188.99 188.99 1 2.179 2.5758 0 1514800000 484550000 1030300000 7840 1658;1790 2986 3063 12228;12229;12230 12230 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.5909 3 438.918722 1313.73434 NaN NaN NaN -0.035514 -1.5588E-05 NaN NaN NaN NaN 81.741 0.38688 81.741 81.413 81.8 0 0 0 0 0.00010801 1 49800 89.805 75.996 1 NaN NaN 0 31372000 0 31372000 7841 1658;1790 2986 3063 12231 12231 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.8814 2 657.874445 1313.73434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.821 1 83.821 83.321 84.321 0 0 0 0 1.1469E-06 1 51417 99.568 74.431 1 7842 1658;1790 2986 3063 12232 12232 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.8821 2 657.874445 1313.73434 74545.72 0.73931 0.00048637 -0.17792 -0.00011705 0.56139 0.00036933 657.874488430935 661.881409088255 94.079 2.0441 94.079 93.781 95.825 0 724 139 11 0 0 0 4.1983E-18 4 52509 146.11 146.11 1 1.524 1.3351 0 198550000 76756000 121800000 7843 1658;1790 2986 3063 12233;12234;12235;12236 12234 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.8826 2 657.874445 1313.73434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.522 1 95.522 95.022 96.022 0 0 0 0 4.5572E-11 1 53532 117.52 95.283 1 7844 1658;1790 2986 3063 12237 12237 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.8824 2 657.874445 1313.73434 74798.1 0.68609 0.00045136 0.0071425 4.6989E-06 0.69323 0.00045606 657.874689006283 661.881548692633 93.759 2.179 93.759 93.363 95.542 -7.6294E-06 842 145 13 0 0 0 7.9007E-38 6 51464 182.28 182.28 1 1.5057 1.3016 0 224420000 87389000 137030000 7845 1658;1790 2986 3063 12238;12239;12240;12241;12242;12243 12239 EHCVCVQGNYIK 12 1 0 Unmodified _EHCVCVQGNYIK_ 0 0 0 A0A024R5Q8;Q05D32 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.5705 3 502.899116 1505.67552 85483.32 0.18681 9.3947E-05 0.4091 0.00020574 0.59591 0.00029968 502.899240010466 505.570712079334 41.143 0.42652 41.143 40.924 41.35 0 133 31 7 0 0 0 0.043163 1 19085 14.687 13.218 1 1.5576 1.2852 0 2351400 924040 1427300 7846 187 2987 3064 12244 12244 EHDPVGQMVNNPK 13 1 0 Oxidation (M) _EHDPVGQM(ox)VNNPK_ EHDPVGQM(1)VNNPK EHDPVGQM(46.46)VNNPK 0 1 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8536 2 740.84609 1479.67763 NaN NaN NaN -0.29717 -0.00022016 NaN NaN NaN NaN 19.06 0.23856 19.06 18.926 19.164 0 0 0 0 0.0071136 1 5486 46.462 32.255 1 NaN NaN 0 4460900 0 4460900 7847 1037 2988 3065 12245 12245 813 EHDPVGQMVNNPK 13 1 0 Oxidation (M) _EHDPVGQM(ox)VNNPK_ EHDPVGQM(1)VNNPK EHDPVGQM(42.79)VNNPK 0 1 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.2404 3 494.233152 1479.67763 NaN NaN NaN 0.76161 0.00037641 NaN NaN NaN NaN 19.017 0.20833 19.017 18.901 19.11 0 0 0 0 0.035456 1 5514 42.789 37.51 1 NaN NaN 0 2813300 0 2813300 7848 1037 2988 3065 12246 12246 813 EHELLEQQK 9 1 0 Unmodified _EHELLEQQK_ 0 0 0 Q13435;E9PJ04;H0YCG1;E9PJT3 Q13435 Q13435 SF3B2 Splicing factor 3B subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.2966 2 577.296027 1152.5775 80421 0.7729 0.00044619 0.30061 0.00017354 1.0735 0.00061973 577.296453084529 581.30320633851 20.646 0.23814 20.646 20.516 20.754 0 29 7 6 0 0 0 2.8949E-72 3 6938 234.82 117.91 1 1.1119 1.1304 0 12609000 5519600 7089200 7849 1713 2989 3066 12247;12248;12249 12249 EHEVFQR 7 0 1 Unmodified _EHEVFQR_ 0 0 0 A0A024R6S1;O60884 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.732 2 472.732866 943.451179 91633.62 0.18498 8.7445E-05 0.56029 0.00026487 0.74527 0.00035231 472.733101600406 477.737220585597 19.566 0.40055 19.566 19.458 19.859 0 82 29 4 0 0 0 0.00049712 1 6164 143.37 100.45 1 1.6576 1.6976 0 6593000 2562300 4030800 7850 208 2990 3067 12250 12250 EHEVFQR 7 0 1 Unmodified _EHEVFQR_ 0 0 0 A0A024R6S1;O60884 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.7375 2 472.732866 943.451179 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.357 1 19.357 18.857 19.857 -1.9073E-06 0 0 0 0.019442 1 6043 111.28 64.927 1 7851 208 2990 3067 12251 12251 EHFSSEVTISNLLNLFQR 18 0 1 Unmodified _EHFSSEVTISNLLNLFQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.3711 3 712.035766 2133.08547 72834.69 0.60171 0.00042844 0.20608 0.00014674 0.80779 0.00057518 712.370241990229 715.706514838797 133.27 0.19862 133.27 133.19 133.39 0 29 5 9 0 0 0 1.0041E-39 1 87245 151.8 151.8 1 1.0288 1.1155 0 49762000 25706000 24057000 7852 897 2991 3068 12252 12252 EHFSSEVTISNLLNLFQR 18 0 1 Unmodified _EHFSSEVTISNLLNLFQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.0373 3 712.035766 2133.08547 72692.66 0.63793 0.00045423 0.65518 0.00046651 1.2931 0.00092074 712.036391395983 715.37245950024 133.24 0.20522 133.24 133.13 133.34 0 23 5 8 0 0 0 1.8491E-159 1 89451 253.06 253.06 1 1.0729 1.2221 0 106220000 51316000 54899000 7853 897 2991 3068 12253 12253 EHGAFDAVK 9 1 0 Unmodified _EHGAFDAVK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.2404 2 487.240524 972.466495 87034.61 0.075808 3.6937E-05 0.44158 0.00021516 0.51739 0.00025209 487.240555743857 491.247846234545 23.765 0.43917 23.765 23.622 24.061 0 64 21 5 0 0 0 0.00068897 1 9612 95.741 82.753 1 1.8286 1.7912 0 21784000 7182000 14602000 7854 196 2992 3069 12254 12254 EHGLNPDVVQNIQDICNSK 19 1 0 Unmodified _EHGLNPDVVQNIQDICNSK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.6865 3 727.351536 2179.03278 NaN NaN NaN -0.21129 -0.00015368 NaN NaN NaN NaN 84.693 0.30884 84.693 84.522 84.831 0 0 0 0 0.040956 1 52102 17.678 8.6316 1 NaN NaN 0 11052000 11052000 0 7855 1873 2993 3070 12255 12255 EHGVVPQADNATPSER 16 0 1 Unmodified _EHGVVPQADNATPSER_ 0 0 0 Q99543;Q08AR5 Q99543 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.6038 3 569.607935 1705.80198 82704.29 0.64866 0.00036948 0.17012 9.6903E-05 0.81878 0.00046638 570.277761988827 572.943947057274 26.601 0.29387 26.601 26.451 26.745 0 49 14 6 0 0 0 0.001529 1 11958 36.127 30.698 1 1.6886 1.6631 0 13186000 4934900 8251100 7856 1993 2994 3071 12256 12256 EHIAASVSIPSEK 13 1 0 Unmodified _EHIAASVSIPSEK_ 0 0 0 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;F6S6P2;X6REW1;A0A0G2JJM1;F6TC96;F6UR09;F6U1F2;F6XTU0;A0A0G2JJR8;A0A1B0GX79;F6WML8;F6VEM6;F6X9W3;F6U341 A0A0G2JL47 A0A0G2JL47 BAT3;BAG6 Large proline-rich protein BAG6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3629 2 684.361899 1366.70924 75307.56 0.56083 0.00038381 0.025846 1.7688E-05 0.58667 0.0004015 684.361916080178 688.369260330713 48.82 0.40831 48.82 48.543 48.951 0 76 32 4 0 0 0 0.00014771 1 27354 83.862 83.862 1 1.3731 1.3975 0 12438000 6138000 6300000 7857 368 2995 3072 12257 12257 EHIDNFLEQLR 11 0 1 Unmodified _EHIDNFLEQLR_ 0 0 0 Q6P0N0;G5E9K5 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.8618 2 707.35969 1412.70483 73346.8 0.65732 0.00046496 -0.36077 -0.00025519 0.29655 0.00020977 707.359717747137 712.363650376372 102.58 0.45444 102.58 102.41 102.87 0 122 31 6 0 0 0 0.0040596 2 58190 58.699 50.474 1 1.0102 0.84687 0 4085200 1928800 2156400 7858 1849 2996 3073 12258;12259 12258 EHIEDFK 7 1 0 Unmodified _EHIEDFK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2289 2 459.2218 916.429047 88187.83 -0.0075806 -3.4812E-06 0.029917 1.3738E-05 0.022336 1.0257E-05 459.22174964791 463.228862356279 23.163 0.40857 23.163 22.994 23.402 0 75 17 7 0 0 0 0.0037696 1 9073 134.06 117.9 1 0.70175 0.76496 0 39958000 23306000 16653000 7859 878 2997 3074 12260 12260 EHIEDFK 7 1 0 Unmodified _EHIEDFK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 463.2288 2 459.2218 916.429047 89101.34 0.10427 4.7885E-05 0.18376 8.4388E-05 0.28804 0.00013227 459.221851996959 463.228874786273 25.732 0.39347 25.732 25.525 25.919 0 64 15 7 0 0 0 0.01285 2 9484 104.45 88.294 1 1.831 1.4687 0 7564000 2762600 4801400 7860 878 2997 3074 12261;12262 12261 EHIEDFK 7 1 0 Unmodified _EHIEDFK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 459.2215 2 459.2218 916.429047 89643.21 0.11476 5.2702E-05 -0.0053291 -2.4472E-06 0.10943 5.0255E-05 459.221746211682 463.228832700349 25.655 0.53343 25.655 25.422 25.955 0 85 21 7 0 0 0 0.026873 2 8967 84.244 74.494 1 1.7143 1.3981 0 5777200 2085700 3691500 7861 878 2997 3074 12263;12264 12264 EHINLGCDMDFDIAGPSIR 19 0 1 Oxidation (M) _EHINLGCDM(ox)DFDIAGPSIR_ EHINLGCDM(1)DFDIAGPSIR EHINLGCDM(78.79)DFDIAGPSIR 0 1 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.3358 3 725.998106 2174.97249 71626.99 1.1918 0.00086521 -0.14607 -0.00010605 1.0457 0.00075916 726.332544783734 729.668323694233 96.121 1.1403 96.121 95.607 96.748 0 517 99 7 0 0 0 1.551E-06 1 58351 78.794 78.794 1 1.6157 1.7189 0 43054000 16090000 26965000 7862 639 2998 3075 12265 12265 495 EHINLGCDMDFDIAGPSIR 19 0 1 Oxidation (M) _EHINLGCDM(ox)DFDIAGPSIR_ EHINLGCDM(1)DFDIAGPSIR EHINLGCDM(54.86)DFDIAGPSIR 0 1 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.3326 3 725.998106 2174.97249 71186.43 0.69893 0.00050742 -0.24493 -0.00017782 0.454 0.0003296 726.666495206815 729.334289319103 94.935 0.98987 94.935 94.517 95.506 0 502 83 9 0 0 0 8.2344E-06 2 58945 54.857 54.857 1 1.7 1.9292 0 48502000 18660000 29842000 7863 639 2998 3075 12266;12267 12267 495 EHINLGCDMDFDIAGPSIR 19 0 1 Oxidation (M) _EHINLGCDM(ox)DFDIAGPSIR_ EHINLGCDM(1)DFDIAGPSIR EHINLGCDM(44.03)DFDIAGPSIR 0 1 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.6688 3 725.998106 2174.97249 70972.45 0.85959 0.00062406 -0.38465 -0.00027926 0.47494 0.00034481 726.332518214341 729.334154788908 108.42 0.69554 108.42 108.18 108.88 -7.6294E-06 177 33 8 0 0 0 7.7727E-05 1 62288 44.029 40.79 1 1.2728 1.0932 0 6384900 2902800 3482100 7864 639 2998 3075 12268 12268 495 EHLLLAR 7 0 1 Unmodified _EHLLLAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 431.2632 2 426.25852 850.502486 94807.07 0.071419 3.0443E-05 0.23875 0.00010177 0.31017 0.00013221 426.258408042048 431.262689936155 36.407 0.78557 36.407 36.172 36.958 0 261 73 5 0 0 0 0.025781 2 18328 88.734 53.629 1 1.9452 2.177 0 88887000 29651000 59236000 7865 1580 2999 3076 12269;12270 12269 EHLLLAR 7 0 1 Unmodified _EHLLLAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 431.2624 2 426.25852 850.502486 NaN NaN NaN 0.23851 0.00010166 NaN NaN NaN NaN 34.524 0.57594 34.524 34.323 34.899 3.8147E-06 0 0 0 0.028281 1 17446 88.734 54.996 1 NaN NaN 0 54511000 0 54511000 7866 1580 2999 3076 12271 12271 EHLLLAR 7 0 1 Unmodified _EHLLLAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 431.2624 2 426.25852 850.502486 94239.29 -0.42655 -0.00018182 0.45054 0.00019205 0.02399 1.0226E-05 426.25875559144 431.262845147897 39.91 0.56907 39.91 39.646 40.215 0 168 44 5 0 0 0 0.052209 1 18290 54.056 26.936 1 1.3669 1.1753 0 6734800 2913400 3821400 7867 1580 2999 3076 12272 12272 EHLLLAR 7 0 1 Unmodified _EHLLLAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 431.2627 2 426.25852 850.502486 92290.52 -0.56583 -0.00024119 0.16457 7.0151E-05 -0.40126 -0.00017104 426.258726472487 431.26279901732 39.459 1.2354 39.459 39.219 40.455 0 279 100 6 0 0 0 0.028425 1 17550 71.949 41.281 1 1.3488 1.1222 0 7308700 2864800 4444000 7868 1580 2999 3076 12273 12273 EHLLQGLLPDVQVPTSVK 18 1 0 Unmodified _EHLLQGLLPDVQVPTSVK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.0466 3 658.373719 1972.09933 76069.53 0.81024 0.00053344 0.23778 0.00015655 1.048 0.00068999 658.708164128644 661.045222374477 115.55 0.6098 115.55 115.24 115.85 0 227 41 8 0 0 0 0.00012916 2 73457 45.347 40.73 1 1.0288 1.0144 0 24743000 11512000 13231000 7869 684 3000 3077 12274;12275 12275 EHLLQGLLPDVQVPTSVK 18 1 0 Unmodified _EHLLQGLLPDVQVPTSVK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.7097 3 658.373719 1972.09933 75410.95 0.69287 0.00045617 0.21051 0.0001386 0.90338 0.00059476 658.708252022653 661.04510192118 114.76 0.52525 114.76 114.45 114.98 7.6294E-06 165 32 7 0 0 0 1.0865E-05 2 74629 62.916 62.916 1 1.054 1.1208 0 23328000 12494000 10834000 7870 684 3000 3077 12276;12277 12276 EHLLQGLLPDVQVPTSVK 18 1 0 Unmodified _EHLLQGLLPDVQVPTSVK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.0456 3 658.373719 1972.09933 74936.52 1.0593 0.00069744 0.055432 3.6495E-05 1.1148 0.00073394 658.708504114977 661.378917983633 126.09 0.47057 126.09 125.92 126.4 0 101 18 7 0 0 0 4.741E-06 2 75795 75.91 75.91 1 1.3277 1.0466 0 17681000 6255900 11425000 7871 684 3000 3077 12278;12279 12278 EHLLQGLLPDVQVPTSVK 18 1 0 Unmodified _EHLLQGLLPDVQVPTSVK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.7094 3 658.373719 1972.09933 75109.47 0.72706 0.00047868 0.33249 0.00021891 1.0596 0.00069758 658.70862446819 661.379253573072 125.89 0.31319 125.89 125.74 126.05 0 94 14 10 0 0 0 0.00023167 1 74760 41.257 41.257 1 1.5335 1.2533 0 12664000 4812600 7851300 7872 684 3000 3077 12280 12280 EHLTTVLDK 9 1 0 Unmodified _EHLTTVLDK_ 0 0 0 B4E014;Q9UBD5;B7Z8A5;B7ZAI3;Q6IBJ0;B4DZ51 B4E014 B4E014 ORC3;ORC3L Origin recognition complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.2906 2 528.290214 1054.56587 87498.98 0.63408 0.00033498 -0.031837 -1.6819E-05 0.60224 0.00031816 528.290160775074 532.297078642561 34.747 0.27668 34.747 34.61 34.887 0 62 23 5 0 0 0 0.0012322 1 17638 88.136 54.586 1 1.3898 1.4086 0 16574000 5941000 10633000 7873 1058 3001 3078 12281 12281 EHLTTVLDK 9 1 0 Unmodified _EHLTTVLDK_ 0 0 0 B4E014;Q9UBD5;B7Z8A5;B7ZAI3;Q6IBJ0;B4DZ51 B4E014 B4E014 ORC3;ORC3L Origin recognition complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.2977 2 528.290214 1054.56587 85022.27 0.17763 9.3841E-05 0.16157 8.5356E-05 0.3392 0.0001792 528.290080308236 532.297392430018 40.434 0.3703 40.434 40.253 40.624 -3.8147E-06 96 30 6 0 0 0 0.0096208 1 18104 60.019 34.282 1 1.1915 0.96402 0 1919600 820360 1099300 7874 1058 3001 3078 12282 12282 EHMQPTHPIR 10 0 1 Oxidation (M) _EHM(ox)QPTHPIR_ EHM(1)QPTHPIR EHM(59.25)QPTHPIR 0 1 0 B4DE78;B3KNB4;P61981;B4DHC4 B4DE78 B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.3093 2 631.308946 1260.60334 NaN NaN NaN NaN NaN NaN NaN NaN NaN 14.976 1 14.976 14.476 15.476 -9.5367E-07 0 0 0 0.0039793 1 2767 59.245 50.031 1 7875 912 3002 3079 12283 12283 750 EHPFLVK 7 1 0 Unmodified _EHPFLVK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.2479 2 435.247621 868.480688 92073.21 0.42058 0.00018305 -0.27753 -0.00012079 0.14305 6.226E-05 435.247437866817 439.254403140602 31.547 0.6924 31.547 31.12 31.813 0 168 62 7 0 0 0 0.009923 2 15630 113.85 85.316 1 0.65837 0.74018 0 72828000 42817000 30011000 7876 1665 3003 3080 12284;12285 12284 EHPFLVK 7 1 0 Unmodified _EHPFLVK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 435.2471 2 435.247621 868.480688 94791.25 -0.38083 -0.00016575 -0.096818 -4.214E-05 -0.47765 -0.00020789 435.247088364413 439.254680241303 36.017 0.64671 36.017 35.852 36.499 0 134 54 7 0 0 0 0.015104 1 16133 99.384 73.826 1 0.35777 0.28224 0 5434400 3931200 1503200 7877 1665 3003 3080 12286 12286 EHQDGTAFSCTPDGR 15 0 1 Unmodified _EHQDGTAFSCTPDGR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 839.3501 2 839.349725 1676.6849 68870.66 0.66119 0.00055497 -0.039411 -3.308E-05 0.62178 0.00052189 839.851312178179 844.855790481058 25.295 0.32244 25.295 25.05 25.372 0 52 14 6 0 0 0 4.2446E-15 2 10859 148.62 144.94 1 0.76615 0.78177 0 6790900 3854800 2936000 7878 1435 3004 3081 12287;12288 12287 EHQDGTAFSCTPDGR 15 0 1 Unmodified _EHQDGTAFSCTPDGR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.2364 3 559.902242 1676.6849 81847.56 0.52613 0.00029458 -0.076714 -4.2952E-05 0.44942 0.00025163 560.236425591272 563.238482619422 25.229 0.42226 25.229 25.011 25.433 0 92 19 8 0 0 0 0.00024146 1 10868 50.077 48.498 1 0.80334 0.83091 0 20277000 11160000 9116600 7879 1435 3004 3081 12289 12289 EHQDGTAFSCTPDGR 15 0 1 Unmodified _EHQDGTAFSCTPDGR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.8516 2 839.349725 1676.6849 66830.24 0.53056 0.00044532 -0.24471 -0.0002054 0.28584 0.00023992 839.85032392714 844.353972371489 24.918 0.65527 24.918 24.835 25.49 0 50 25 6 0 0 0 7.6202E-22 3 10585 172.76 172.54 1 0.80855 0.84393 0 22444000 11396000 11049000 7880 1435 3004 3081 12290;12291;12292 12290 EHQDGTAFSCTPDGR 15 0 1 Unmodified _EHQDGTAFSCTPDGR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.2385 3 559.902242 1676.6849 80091.63 0.43366 0.00024281 -0.25322 -0.00014178 0.18044 0.00010103 559.902006367063 563.238391939089 24.933 0.47757 24.933 24.773 25.251 0 73 18 9 0 0 0 0.00013971 1 10645 57.148 57.148 1 0.85197 0.93055 0 38063000 16617000 21446000 7881 1435 3004 3081 12293 12293 EHQDGTAFSCTPDGR 15 0 1 Unmodified _EHQDGTAFSCTPDGR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.903 3 559.902242 1676.6849 79214.13 0.51813 0.0002901 -0.23075 -0.0001292 0.28737 0.0001609 559.902180689954 563.238342517916 28.261 0.73691 28.261 27.835 28.571 0 175 36 8 0 0 0 0.050487 1 11286 16.363 16.363 1 1.6016 1.3481 0 4544000 1615700 2928300 7882 1435 3004 3081 12294 12294 EHQDGTAFSCTPDGR 15 0 1 Unmodified _EHQDGTAFSCTPDGR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.2381 3 559.902242 1676.6849 81247.45 0.2325 0.00013018 -0.30117 -0.00016862 -0.068664 -3.8445E-05 559.902151256966 563.238354324684 28.629 0.62473 28.629 28.287 28.912 0 186 38 7 0 0 0 0.0030749 1 10982 35.091 35.091 1 1.5668 1.358 0 3454500 1524900 1929700 7883 1435 3004 3081 12295 12295 EHQEFLTK 8 1 0 Unmodified _EHQEFLTK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.2615 2 516.261456 1030.50836 83779.25 0.15022 7.7555E-05 -0.14669 -7.5729E-05 0.0035379 1.8265E-06 516.261464643476 520.268734216526 23.274 0.40543 23.274 23.061 23.467 0 58 18 6 0 0 0 0.0016981 1 9219 106.6 61.907 1 1.4854 1.5837 0 20864000 8615600 12249000 7884 1581 3005 3082 12296 12296 EHQEMDEGSQSLEK 14 1 0 Oxidation (M) _EHQEM(ox)DEGSQSLEK_ EHQEM(1)DEGSQSLEK EHQEM(87)DEGSQSLEK 0 1 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.8566 2 831.849223 1661.68389 NaN NaN NaN -0.23826 -0.0001982 NaN NaN NaN NaN 15.864 0.16193 15.864 15.782 15.944 0 0 0 0 4.8563E-05 1 3403 87.001 79.873 1 NaN NaN 0 3051600 0 3051600 7885 1945 3006 3083 12297 12297 1788 EHSAFQAPAVK 11 1 0 Unmodified _EHSAFQAPAVK_ 0 0 0 G3XAN4;Q6FHU7;Q6FHL3;A8K032;Q15629 G3XAN4 G3XAN4 TRAM1 Translocating chain-associated membrane protein;Translocating chain-associated membrane protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.8121 2 592.806562 1183.59857 76533.52 0.36497 0.00021636 0.34499 0.00020451 0.70995 0.00042087 592.807116746274 596.813414164778 32.859 0.38077 32.859 32.659 33.039 0 99 35 4 0 0 0 5.1395E-31 1 16368 182.39 137.31 1 1.0456 1.1161 0 20962000 11349000 9612800 7886 697 3007 3084 12298 12298 EHSLQVSPSLEK 12 1 0 Unmodified _EHSLQVSPSLEK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3622 2 677.354074 1352.69359 73675.38 0.85684 0.00058038 1.3234 0.00089639 2.1802 0.0014768 677.354578145138 681.362751768954 41.238 0.61726 41.238 40.94 41.557 0 144 50 5 0 0 0 1.4732E-37 1 21665 176.95 153.57 1 1.1781 1.1727 0 19023000 9889400 9133900 7887 1421 3008 3085 12299 12299 EHSLQVSPSLEK 12 1 0 Unmodified _EHSLQVSPSLEK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.3615 2 677.354074 1352.69359 73381.84 0.36163 0.00024495 0.76166 0.00051591 1.1233 0.00076086 677.354751412978 681.361364805958 47.48 0.74691 47.48 47.09 47.837 0 205 47 6 0 0 0 1.0446E-05 1 22994 107.85 98.414 1 0.89872 0.69754 0 3544100 1857500 1686600 7888 1421 3008 3085 12300 12300 EHTLAWK 7 1 0 Unmodified _EHTLAWK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.7417 2 442.734877 883.455202 91733.13 -0.0709 -3.139E-05 1.2176 0.00053906 1.1467 0.00050767 442.735091611688 446.742098246232 27.282 0.44849 27.282 27.034 27.483 1.9073E-06 68 22 5 0 0 0 0.0079269 1 12562 128.48 99.956 1 2.0789 2.2174 0 20901000 7725900 13175000 7889 1507 3009 3086 12301 12301 EHVDVIAK 8 1 0 Unmodified _EHVDVIAK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.7533 2 455.753267 909.491981 89143.93 -0.2531 -0.00011535 -0.26409 -0.00012036 -0.5172 -0.00023571 455.753407677031 459.759919187796 23.303 0.62523 23.303 22.996 23.622 0 82 30 4 0 0 0 1.0848E-14 1 9164 174.27 141.8 1 1.1171 1.2612 0 80296000 38810000 41486000 7890 1741 3010 3087 12302 12302 EHVDVIAK 8 1 0 Unmodified _EHVDVIAK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.7604 2 455.753267 909.491981 81685.77 0.25761 0.00011741 0.97065 0.00044238 1.2283 0.00055978 455.753357177397 459.760252855075 22.604 0.49711 22.604 22.412 22.91 0 97 21 6 0 0 0 7.1865E-14 2 8547 165.52 130.03 1 1.2127 1.3549 0 90543000 40768000 49775000 7891 1741 3010 3087 12303;12304 12303 EHVDVIAK 8 1 0 Unmodified _EHVDVIAK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 455.7539 2 455.753267 909.491981 88855.24 0.20552 9.3667E-05 0.20436 9.3136E-05 0.40988 0.0001868 455.753384215584 459.759997491787 24.901 0.89725 24.901 24.553 25.45 0 164 46 8 0 0 0 0.00018692 1 8894 135.77 103.3 1 1.4659 1.155 0 17602000 6972100 10630000 7892 1741 3010 3087 12305 12305 EHVDVIAK 8 1 0 Unmodified _EHVDVIAK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 459.76 2 455.753267 909.491981 86949.85 0.018999 8.6587E-06 0.36442 0.00016609 0.38342 0.00017474 455.753251208985 459.760155427378 24.68 0.68467 24.68 24.466 25.151 0 135 33 7 0 0 0 0.00090957 2 8213 125.81 98.77 1 1.4802 1.2122 0 12525000 5077400 7447600 7893 1741 3010 3087 12306;12307 12306 EHVEEISELFYDAK 14 1 0 Unmodified _EHVEEISELFYDAK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 854.9063 2 854.906867 1707.79918 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.029 1 96.029 95.529 96.529 -7.6294E-06 0 0 0 8.6198E-07 1 58474 103.43 85.997 1 7894 1076 3011 3088 12308 12308 EHVEEISELFYDAK 14 1 0 Unmodified _EHVEEISELFYDAK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 854.9088 2 854.906867 1707.79918 67019.41 0.73175 0.00062558 -0.046969 -4.0154E-05 0.68479 0.00058543 855.407943156786 858.91390674392 94.876 0.7839 94.876 94.47 95.253 0 269 66 6 0 0 0 1.907E-21 1 58780 147.26 138.19 1 0.75988 0.77768 0 31721000 18499000 13222000 7895 1076 3011 3088 12309 12309 EHVEEISELFYDAK 14 1 0 Unmodified _EHVEEISELFYDAK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 854.909 2 854.906867 1707.79918 66573.45 0.7709 0.00065905 0.33179 0.00028365 1.1027 0.00094269 855.408726418202 858.914179388091 108.03 0.69858 108.03 107.76 108.46 0 197 36 9 0 0 0 1.5997E-06 1 61913 107.97 105.83 1 1.203 0.9501 0 10674000 4488500 6185600 7896 1076 3011 3088 12310 12310 EHVEEISELFYDAK 14 1 0 Unmodified _EHVEEISELFYDAK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.9072 2 854.906867 1707.79918 66876.41 0.65121 0.00055673 -0.084888 -7.2571E-05 0.56632 0.00048415 854.906815281806 858.91406725882 107.95 0.86988 107.95 107.64 108.51 0 178 41 8 0 0 0 8.5539E-05 1 60941 87.667 84.346 1 1.1735 0.95753 0 6177800 2946400 3231500 7897 1076 3011 3088 12311 12311 EHVEEISELFYDAK 14 1 0 Unmodified _EHVEEISELFYDAK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.2732 3 570.27367 1707.79918 81811.98 0.51905 0.000296 0.88612 0.00050533 1.4052 0.00080133 570.274993249561 572.945208412888 107.94 0.68937 107.94 107.58 108.26 7.6294E-06 125 34 7 0 0 0 0.0040888 2 61014 22.456 20.094 1 1.1998 0.95875 0 1971900 735680 1236200 7898 1076 3011 3088 12312;12313 12313 EHVIEALR 8 0 1 Unmodified _EHVIEALR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;X5D7P1;H7C2C5;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7764 2 483.771991 965.529429 85535.73 0.019655 9.5088E-06 0.25558 0.00012364 0.27523 0.00013315 483.772163149846 488.776117740702 34.231 1.2938 34.231 33.947 35.241 0 420 113 7 0 0 0 1.1981E-05 3 17026 145.34 106.54 1 0.91883 1.0899 0 645260000 332510000 312750000 7899 1524;1266 3012 3089 12314;12315;12316 12314 EHVIEALR 8 0 1 Unmodified _EHVIEALR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;X5D7P1;H7C2C5;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.7722 2 483.771991 965.529429 86312.65 0.42756 0.00020684 -0.20999 -0.00010159 0.21757 0.00010525 483.771855749989 488.775902112738 32.388 1.5165 32.388 31.84 33.356 0 567 141 8 0 0 0 0.0086013 3 15859 77.923 54.88 1 0.87636 1.0219 0 487670000 265170000 222500000 7900 1524;1266 3012 3089 12317;12318;12319 12317 EHVIEALR 8 0 1 Unmodified _EHVIEALR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;X5D7P1;H7C2C5;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.772 2 483.771991 965.529429 85257.8 0.15063 7.2871E-05 -0.055702 -2.6947E-05 0.094929 4.5924E-05 483.771910380207 488.776010859929 37.593 1.8913 37.593 36.816 38.707 3.8147E-06 719 148 8 0 0 0 0.0065084 3 17072 86.953 67.593 1 1.0413 0.89617 0 53152000 26460000 26692000 7901 1524;1266 3012 3089 12320;12321;12322 12321 EHVIEALR 8 0 1 Unmodified _EHVIEALR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;X5D7P1;H7C2C5;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.7762 2 483.771991 965.529429 86258.67 0.12475 6.0349E-05 -0.076479 -3.6999E-05 0.048267 2.335E-05 483.771886724985 488.775988289908 37.218 2.0934 37.218 36.515 38.608 0 817 172 8 0 0 0 0.0065084 3 16065 86.953 68.918 1 1.0226 0.89212 0 47028000 24915000 22113000 7902 1524;1266 3012 3089 12323;12324;12325 12324 EHVIEALRR 9 0 2 Unmodified _EHVIEALRR_ 0 0 1 F8W7C6;A0A087WV22;H7C123;X5D7P1;H7C2C5;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 375.2004 3 374.884123 1121.63054 98510.41 -0.053087 -1.9902E-05 -0.19797 -7.4215E-05 -0.25106 -9.4117E-05 374.883884691361 381.55624248524 27.573 0.29517 27.573 27.467 27.762 0 83 21 6 0 0 0 0.0085555 1 12733 76.827 8.8341 1 1.0007 1.0939 0 13209000 7002800 6206000 7903 1524;1266 3013 3090 12326 12326 EHVIEALRR 9 0 2 Unmodified _EHVIEALRR_ 0 0 1 F8W7C6;A0A087WV22;H7C123;X5D7P1;H7C2C5;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 374.8846 3 374.884123 1121.63054 96323.69 0.3391 0.00012712 0.27725 0.00010394 0.61636 0.00023106 374.884346710822 381.55614132927 24.803 0.36345 24.803 24.675 25.038 -1.9073E-06 68 15 6 0 0 0 0.00017697 1 10474 95.502 19.438 1 0.93617 1.061 0 32537000 17399000 15138000 7904 1524;1266 3013 3090 12327 12327 EHVIEALRR 9 0 2 Unmodified _EHVIEALRR_ 0 0 1 F8W7C6;A0A087WV22;H7C123;X5D7P1;H7C2C5;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 381.5562 3 374.884123 1121.63054 96148.53 -0.2471 -9.2635E-05 -0.049405 -1.8521E-05 -0.29651 -0.00011116 374.884020403948 381.556169030296 27.748 0.61095 27.748 27.574 28.185 1.9073E-06 110 26 6 0 0 0 0.061864 1 10382 17.231 0 1 1.0464 0.94589 0 3066200 1524900 1541300 7905 1524;1266 3013 3090 12328 12328 EHYLEDILAK 10 1 0 Unmodified _EHYLEDILAK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 619.8298 2 615.821878 1229.6292 75591.54 0.44872 0.00027633 -0.44527 -0.00027421 0.0034481 2.1234E-06 615.821837790594 619.828659319902 87.839 0.78672 87.839 87.416 88.203 7.6294E-06 168 47 6 0 0 0 0.0060288 1 47454 59.35 59.35 1 1.4828 1.1666 0 3858200 1652500 2205700 7906 122 3014 3091 12329 12329 EIADLGEALATAVIPQWQK 19 1 0 Unmodified _EIADLGEALATAVIPQWQK_ 0 0 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1031.562 2 1027.05185 2052.08916 63120.9 0.56657 0.0005819 0.40828 0.00041933 0.97485 0.0010012 1027.55253279572 1031.56126789577 133.05 0.34833 133.05 132.84 133.19 0 65 15 7 0 0 0 1.4356E-22 1 89189 130.56 130.56 1 4.1228 4.1932 0 12544000 2554200 9990000 7907 1583 3015 3092 12330 12330 EIAEAYDVLSDPR 13 0 1 Unmodified _EIAEAYDVLSDPR_ 0 0 0 Q6FI51;Q6FHS4;P25685;B4DKK9 Q6FI51 Q6FI51 DNAJB1 DnaJ homolog subfamily B member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.3679 2 739.362096 1476.70964 NaN NaN NaN 0.56198 0.00041551 NaN NaN NaN NaN 85.621 0.48962 85.621 85.37 85.86 0 0 0 0 0.0077003 1 52820 54.343 33.506 1 NaN NaN 0 9914100 0 9914100 7908 1517 3016 3093 12331 12331 EIAEAYLGK 9 1 0 Unmodified _EIAEAYLGK_ 0 0 0 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.2733 2 497.266207 992.517862 85632.29 0.35989 0.00017896 -0.03905 -1.9418E-05 0.32084 0.00015954 497.266052194277 501.273193613172 53.425 1.2042 53.425 52.901 54.106 -3.8147E-06 472 95 7 0 0 0 0.0021808 2 29772 75.738 20.874 1 1.397 1.5986 0 186920000 79056000 107860000 7909 1467;1248 3017 3094 12332;12333 12332 EIAEAYLGK 9 1 0 Unmodified _EIAEAYLGK_ 0 0 0 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.2665 2 497.266207 992.517862 85652.71 0.30213 0.00015024 0.088954 4.4234E-05 0.39108 0.00019447 497.266202781106 501.273264856596 52.244 1.1069 52.244 51.698 52.805 0 484 85 8 0 0 0 0.0039394 2 29573 70.525 27.311 1 1.3604 1.566 0 177480000 73172000 104310000 7910 1467;1248 3017 3094 12334;12335 12335 EIAEAYLGK 9 1 0 Unmodified _EIAEAYLGK_ 0 0 0 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.2735 2 497.266207 992.517862 84189.87 0.21195 0.0001054 0.1663 8.2693E-05 0.37825 0.00018809 497.266104721139 501.273300214527 61.384 1.2034 61.384 60.978 62.182 0 375 97 7 0 0 0 0.03089 1 31314 45.68 22.899 1 1.4234 1.1443 0 21698000 9095500 12602000 7911 1467;1248 3017 3094 12336 12336 EIAEAYLGK 9 1 0 Unmodified _EIAEAYLGK_ 0 0 0 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.2661 2 497.266207 992.517862 85896.64 -0.015162 -7.5397E-06 0.27062 0.00013457 0.25546 0.00012703 497.266186679171 501.273327192793 61.903 1.1515 61.903 61.397 62.549 0 420 88 7 0 0 0 0.0074258 2 31001 61.999 30.065 1 1.4579 1.1707 0 14815000 6698500 8116800 7912 1467;1248 3017 3094 12337;12338 12338 EIAEEYGGVMVSFPR 15 0 1 Oxidation (M) _EIAEEYGGVM(ox)VSFPR_ EIAEEYGGVM(1)VSFPR EIAEEYGGVM(74.61)VSFPR 0 1 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7C2D1;Q2HJC8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.4099 2 850.403437 1698.79232 NaN NaN NaN -0.25221 -0.00021448 NaN NaN NaN NaN 96.578 0.42535 96.578 96.374 96.799 0 0 0 0 0.0001088 1 60348 74.611 62.034 1 NaN NaN 0 8098000 0 8098000 7913 154 3018 3095 12339 12339 130 EIAENALGK 9 1 0 Unmodified _EIAENALGK_ 0 0 0 Q53F48;A0A024QZK8;P31942 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.7639 2 472.756007 943.497461 NaN NaN NaN 0.065245 3.0845E-05 NaN NaN NaN NaN 31.608 0.47317 31.608 31.366 31.84 0 0 0 0 0.0014475 1 15624 86.095 40.213 1 NaN NaN 0 40701000 0 40701000 7914 23 3019 3096 12340 12340 EIAIDVPNVSWSDIGGLESIK 21 1 0 Unmodified _EIAIDVPNVSWSDIGGLESIK_ 0 0 0 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1125.5902 2 1121.58372 2241.15288 NaN NaN NaN 0.15772 0.0001769 NaN NaN NaN NaN 130.69 0.26759 130.69 130.6 130.86 0 0 0 0 0.010314 1 85270 37.013 28.192 1 NaN NaN 0 2091400 0 2091400 7915 1919 3020 3097 12341 12341 EIAIDVPNVSWSDIGGLESIK 21 1 0 Unmodified _EIAIDVPNVSWSDIGGLESIK_ 0 0 0 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1125.5918 2 1121.58372 2241.15288 58373.6 0.46883 0.00052583 -0.70337 -0.00078889 -0.23454 -0.00026305 1121.58396680089 1125.59166601419 130.39 0.31882 130.39 130.21 130.53 0 80 20 6 0 0 0 0.003005 2 87119 30.998 30.998 1 0.95211 0.94531 0 6095300 3164000 2931300 7916 1919 3020 3097 12342;12343 12343 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7181 2 425.718893 849.423233 92647.28 0.020673 8.801E-06 -0.042958 -1.8288E-05 -0.022285 -9.487E-06 425.718770765286 429.725950679118 34.524 1.2283 34.524 34.415 35.643 0 389 107 4 0 0 0 0.020239 2 17727 94.262 8.9051 1 0.76625 0.86902 0 95638000 56481000 39157000 7917 827;1661;1865 3021 3098 12344;12345 12345 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7186 2 425.718893 849.423233 88309.17 -0.07336 -3.1231E-05 1.0611 0.00045172 0.98772 0.00042049 425.718864068154 429.72611405332 39.93 0.63766 39.93 39.637 40.274 0 177 52 5 0 0 0 0.026865 1 20984 74.439 8.7665 1 0.75858 0.74403 0 20596000 11294000 9301600 7918 827;1661;1865 3021 3098 12346 12346 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.719 2 425.718893 849.423233 95008.44 0.21032 8.9537E-05 -0.19083 -8.1241E-05 0.019487 8.2959E-06 425.718667144173 429.726099503788 41.18 0.79342 41.18 40.753 41.547 0 118 66 4 0 0 0 0.033853 1 21865 63.287 7.6835 1 0.71621 0.75111 0 15229000 8936200 6292700 7919 827;1661;1865 3021 3098 12347 12347 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7186 2 425.718893 849.423233 NaN NaN NaN -0.2576 -0.00010967 NaN NaN NaN NaN 31.228 3.595 31.228 30.845 34.44 0 0 0 0 0.027095 5 16777 90.706 10.325 1 NaN NaN 0 9925800000 9925800000 0 7920 827;1661;1865 3021 3098 12348;12349;12350;12351;12352 12351 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 429.7266 2 425.718893 849.423233 90885.52 0.050738 2.16E-05 0.014313 6.0933E-06 0.065051 2.7693E-05 425.718858965122 429.725864517143 30.007 0.43837 30.007 29.835 30.273 0 164 35 8 0 0 0 0.026711 2 14555 76.847 9.8117 1 0.76452 0.89784 0 348690000 184390000 164310000 7921 827;1661;1865 3021 3098 12353;12354 12354 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7189 2 425.718893 849.423233 NaN NaN NaN 0.04025 1.7135E-05 NaN NaN NaN NaN 30.744 4.626 30.744 30.247 34.872 0 0 0 0 0.029873 6 15537 86.086 10.776 1 NaN NaN 0 10835000000 10835000000 0 7922 827;1661;1865 3021 3098 12355;12356;12357;12358;12359;12360 12356 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 429.7261 2 425.718893 849.423233 NaN NaN NaN 0.28591 0.00012172 NaN NaN NaN NaN 35.027 2.1014 35.027 34.345 36.446 0 0 0 0 0.031658 1 17688 72.138 9.4211 1 NaN NaN 0 20267000 0 20267000 7923 827;1661;1865 3021 3098 12361 12361 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7186 2 425.718893 849.423233 NaN NaN NaN 0.23257 9.9008E-05 NaN NaN NaN NaN 39.023 0.76141 39.023 38.908 39.67 0 0 0 0 0.035117 1 20689 65.672 8.5697 1 NaN NaN 0 11907000 11907000 0 7924 827;1661;1865 3021 3098 12362 12362 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 425.7188 2 425.718893 849.423233 91617.93 -0.13181 -5.6114E-05 0.18906 8.0485E-05 0.057248 2.4371E-05 425.718866843338 429.725935916232 34.137 0.52175 34.137 33.949 34.47 0 190 45 7 0 0 0 0.027034 2 15036 85.89 9.0706 1 0.89655 0.7327 0 33966000 18565000 15401000 7925 827;1661;1865 3021 3098 12363;12364 12364 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 425.7183 2 425.718893 849.423233 NaN NaN NaN 0.3354 0.00014279 NaN NaN NaN NaN 35.063 8.3917 35.063 34.786 43.178 -3.8147E-06 0 0 0 0.03108 9 15890 73.975 10.031 1 NaN NaN 0 1326500000 1326500000 0 7926 827;1661;1865 3021 3098 12365;12366;12367;12368;12369;12370;12371;12372;12373 12366 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 429.726 2 425.718893 849.423233 92601.89 -0.36625 -0.00015592 0.33973 0.00014463 -0.026515 -1.1288E-05 425.718978260755 429.725940542121 34.213 0.48759 34.213 34.048 34.536 3.8147E-06 159 39 7 0 0 0 0.061926 1 14585 49.59 8.2876 1 0.90038 0.72258 0 18310000 9173800 9135700 7927 827;1661;1865 3021 3098 12374 12374 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 425.7187 2 425.718893 849.423233 NaN NaN NaN 0.35767 0.00015227 NaN NaN NaN NaN 35.125 12.07 35.125 34.849 46.92 0 0 0 0 0.021795 6 15866 97.473 10.534 1 NaN NaN 0 1264000000 1264000000 0 7928 827;1661;1865 3021 3098 12375;12376;12377;12378;12379;12380 12377 EIAQDFKTDLR 11 1 1 Unmodified _EIAQDFKTDLR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6TXQ4;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.1;Histone H3.2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.8673 2 668.348791 1334.68303 74730.77 0.60903 0.00040704 -0.045175 -3.0193E-05 0.56385 0.00037685 668.348700005236 677.36000078312 53.844 0.66351 53.844 53.537 54.201 0 204 63 6 0 0 0 0.033458 1 30714 57.785 57.785 1 0.83001 0.97612 0 71786000 34888000 36898000 7929 827;1661;1865 3022 3099 12381 12381 EIAQEFK 7 1 0 Unmodified _EIAQEFK_ 0 0 0 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.7265 2 432.726718 863.438883 90694.47 -0.094489 -4.0888E-05 0.31473 0.00013619 0.22024 9.5303E-05 432.726763851411 436.733755886542 32.97 0.74111 32.97 32.775 33.516 0 362 73 7 0 0 0 0.042314 1 16384 58.604 30.182 1 0.74185 0.83827 0 142020000 83958000 58063000 7930 1828 3023 3100 12382 12382 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.58 3 450.573503 1348.69868 91784.83 0.32076 0.00014452 -1.2536 -0.00056482 -0.9328 -0.0004203 450.573417867784 456.580083909465 53.35 0.56143 53.35 53.035 53.596 0 143 43 5 0 0 0 0.0081851 1 29804 45.879 28.14 1 0.87288 1.0485 0 69949000 35920000 34030000 7931 1828 3024 3101 12383 12383 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3684 2 675.356616 1348.69868 72786.27 0.75588 0.00051049 -0.11199 -7.5634E-05 0.64389 0.00043485 675.356714104907 684.367673288195 55.832 2.7954 55.832 55.565 58.361 -3.8147E-06 1486 226 13 0 0 0 4.1094E-22 5 31757 166.66 113.16 1 0.70556 0.86828 0 2996400000 1698200000 1298200000 7932 1828 3024 3101 12384;12385;12386;12387;12388 12387 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.5737 3 450.573503 1348.69868 NaN NaN NaN 0.2372 0.00010688 NaN NaN NaN NaN 55.962 3.3753 55.962 55.537 58.912 0 0 0 0 0.0030565 4 32266 61.213 43.076 1 NaN NaN 0 2886500000 2886500000 0 7933 1828 3024 3101 12389;12390;12391;12392 12391 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3668 2 675.356616 1348.69868 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.318 1 53.318 52.818 53.818 0 0 0 0 0.027861 1 29805 61.78 33.053 1 7934 1828 3024 3101 12393 12393 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.5805 3 450.573503 1348.69868 90239.04 0.14692 6.6198E-05 -0.33183 -0.00014951 -0.18491 -8.3317E-05 450.573516088457 456.580652315115 52.035 0.79095 52.035 51.639 52.43 0 217 61 5 0 0 0 0.00079659 1 29511 54.471 36.335 1 0.70241 0.82111 0 50099000 30001000 20098000 7935 1828 3024 3101 12394 12394 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3576 2 675.356616 1348.69868 72706.17 0.58939 0.00039805 -0.26933 -0.00018189 0.32006 0.00021615 675.356648193845 684.367534782186 54.792 2.3851 54.792 54.417 56.802 3.8147E-06 1147 186 13 0 0 0 8.346E-10 4 31166 135.55 100.32 1 0.72602 0.87313 0 2523200000 1489500000 1033700000 7936 1828 3024 3101 12395;12396;12397;12398 12395 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3572 2 675.356616 1348.69868 74113.3 0.48002 0.00032419 0.010947 7.3934E-06 0.49097 0.00033158 675.356971006481 684.367053452485 56.042 0.82181 56.042 55.967 56.789 3.8147E-06 130 62 4 0 0 0 0.0050457 2 32178 71.349 37.268 1 1.1593 1.3502 0 42959000 21719000 21240000 7937 1828 3024 3101 12399;12400 12399 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.5739 3 450.573503 1348.69868 NaN NaN NaN 0.23746 0.00010699 NaN NaN NaN NaN 54.644 2.9622 54.644 54.45 57.412 0 0 0 0 0.015534 4 31715 45.077 30.202 1 NaN NaN 0 3457200000 3457200000 0 7938 1828 3024 3101 12401;12402;12403;12404 12402 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.3576 2 675.356616 1348.69868 72521.81 0.66165 0.00044685 -0.18705 -0.00012632 0.4746 0.00032052 675.356839333012 684.367491064703 64.983 3.8938 64.983 64.407 68.301 0 1679 270 12 0 0 0 2.3046E-22 4 33778 170.68 98.977 1 0.78106 0.72423 0 481450000 270110000 211340000 7939 1828 3024 3101 12405;12406;12407;12408 12405 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 450.5738 3 450.573503 1348.69868 NaN NaN NaN 0.39178 0.00017653 NaN NaN NaN NaN 64.923 4.187 64.923 64.392 68.579 0 0 0 0 0.052853 1 34238 35.645 18.703 1 NaN NaN 0 463960000 463960000 0 7940 1828 3024 3101 12409 12409 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.3578 2 675.356616 1348.69868 72476.57 0.41795 0.00028227 -0.054012 -3.6478E-05 0.36394 0.00024579 675.356937534062 684.367616924788 65.401 3.7843 65.401 64.85 68.635 0 1610 264 12 0 0 0 1.4546E-30 4 33283 185.27 137.68 1 0.75888 0.65405 0 509190000 279980000 229220000 7941 1828 3024 3101 12410;12411;12412;12413 12411 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 450.5741 3 450.573503 1348.69868 NaN NaN NaN 0.52648 0.00023722 NaN NaN NaN NaN 65.43 4.2729 65.43 64.838 69.111 0 0 0 0 0.046636 1 33273 38.021 15.104 1 NaN NaN 0 383040000 383040000 0 7942 1828 3024 3101 12414 12414 EIAQEGKGDYLR 12 1 1 Unmodified _EIAQEGKGDYLR_ 0 0 1 REV__P31689 REV__P31689 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.3546 2 689.851698 1377.68884 73325.17 0.43479 0.00029994 -0.6959 -0.00048007 -0.26111 -0.00018013 689.851620638909 698.863056461504 78.436 1.3037 78.436 77.637 78.941 -7.6294E-06 455 102 8 0 0 0 0.0012743 3 47470 86.136 55.217 1 0.79486 0.93858 0 136910000 73733000 63181000 + 7943 2177 3025 3102 12415;12416;12417 12416 EICAVLAAVTEVIR 14 0 1 Unmodified _EICAVLAAVTEVIR_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.9034 2 772.429258 1542.84396 75237.13 0.82799 0.00063956 -1.227 -0.00094778 -0.39902 -0.00030822 772.42845446475 777.43194042101 133.21 0.40799 133.21 132.96 133.37 0 33 13 6 0 0 0 0.042321 1 89444 45.829 37.942 1 1.3496 1.3608 0 6299200 2132200 4167000 7944 907 3026 3103 12418 12418 EIDDTYIEDAADVDAR 16 0 1 Unmodified _EIDDTYIEDAADVDAR_ 0 0 0 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 905.9025 2 905.90251 1809.79047 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.702 1 89.702 89.202 90.202 0 0 0 0 2.3238E-18 1 54147 127.56 104.19 1 7945 957 3027 3104 12419 12419 EIDGGLETLR 10 0 1 Unmodified _EIDGGLETLR_ 0 0 0 P38117;M0QY67 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.7936 2 551.790578 1101.5666 80717.97 0.80393 0.0004436 0.22289 0.00012299 1.0268 0.00056659 551.790600285022 556.794462007655 65.673 0.78813 65.673 65.265 66.053 0 246 72 5 0 0 0 0.0011505 4 37676 75.378 39.498 1 3.8725 3.9282 0 28779000 6393600 22386000 7946 1551 3028 3105 12420;12421;12422;12423 12420 EIDGGLETLR 10 0 1 Unmodified _EIDGGLETLR_ 0 0 0 P38117;M0QY67 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.7949 2 551.790578 1101.5666 81787.84 0.47296 0.00026098 0.15036 8.2967E-05 0.62332 0.00034394 551.790973542163 556.794636538194 64.538 0.73547 64.538 64.173 64.908 0 226 65 5 0 0 0 0.0078188 2 37823 56.916 34.713 1 3.7745 4.082 0 26994000 5661600 21332000 7947 1551 3028 3105 12424;12425 12424 EIDLLLGQTDDTR 13 0 1 Unmodified _EIDLLLGQTDDTR_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.8851 2 744.880652 1487.74675 68722.15 0.85831 0.00063934 0.057111 4.2541E-05 0.91542 0.00068188 744.880614730747 749.884963678249 98.116 0.86496 98.116 97.749 98.614 7.6294E-06 366 70 7 0 0 0 4.1448E-09 3 59972 152.69 138.79 1 0.99567 1.1224 0 98778000 55583000 43195000 7948 1411 3029 3106 12426;12427;12428 12428 EIDLLLGQTDDTR 13 0 1 Unmodified _EIDLLLGQTDDTR_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8809 2 744.880652 1487.74675 NaN NaN NaN 0.21368 0.00015916 NaN NaN NaN NaN 97.477 0.91808 97.477 97.014 97.932 0 0 0 0 1.0505E-37 1 60759 159.09 135.48 1 NaN NaN 0 58584000 58584000 0 7949 1411 3029 3106 12429 12429 EIDLLLGQTDDTR 13 0 1 Unmodified _EIDLLLGQTDDTR_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.8854 2 744.880652 1487.74675 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.345 1 97.345 96.845 97.845 -7.6294E-06 0 0 0 2.4142E-16 1 60819 125.22 78.326 1 7950 1411 3029 3106 12430 12430 EIDLLLGQTDDTR 13 0 1 Unmodified _EIDLLLGQTDDTR_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 749.886 2 744.880652 1487.74675 69845.09 0.93031 0.00069297 0.12473 9.2909E-05 1.055 0.00078588 744.880533160802 749.885217261546 110.55 0.72453 110.55 110.22 110.95 7.6294E-06 108 34 4 0 0 0 9.5096E-06 3 63823 100.69 91.254 1 1.0234 0.87887 0 8094000 3511900 4582100 7951 1411 3029 3106 12431;12432;12433 12433 EIDLLLGQTDDTR 13 0 1 Unmodified _EIDLLLGQTDDTR_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.881 2 744.880652 1487.74675 68581.45 0.73903 0.00055049 0.19295 0.00014373 0.93198 0.00069421 744.880644854287 749.885502963929 110.54 0.96047 110.54 110.17 111.13 0 209 50 7 0 0 0 0.00036904 1 62882 77.062 77.062 1 1.0062 0.83744 0 6174600 3283700 2890900 7952 1411 3029 3106 12434 12434 EIDLVNRDPK 10 1 1 Unmodified _EIDLVNRDPK_ 0 0 1 C9JKI3;Q7Z4F3;A0A024R757;E9PCT5;A9XTE5;Q2TNI1;Q59E85;Q03135;A0A1I9UVK8;A0A024R2D8;P56539 C9JKI3 C9JKI3 CAV1;CAV3 Caveolin;Caveolin-1;Caveolin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8255 2 599.824952 1197.63535 78611.27 0.71392 0.00042822 0.022153 1.3288E-05 0.73607 0.00044151 599.825022837083 608.836169228203 36.835 0.418 36.835 36.54 36.958 0 107 38 5 0 0 0 0.010068 1 18599 71.692 48.263 1 1.0069 1.1067 0 17635000 8152600 9482700 7953 215 3030 3107 12435 12435 EIDLVNRDPK 10 1 1 Unmodified _EIDLVNRDPK_ 0 0 1 C9JKI3;Q7Z4F3;A0A024R757;E9PCT5;A9XTE5;Q2TNI1;Q59E85;Q03135;A0A1I9UVK8;A0A024R2D8;P56539 C9JKI3 C9JKI3 CAV1;CAV3 Caveolin;Caveolin-1;Caveolin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.837 2 599.824952 1197.63535 80498.98 1.2176 0.00073038 0.031173 1.8698E-05 1.2488 0.00074907 600.326501295996 608.836238322202 35.639 0.44899 35.639 35.433 35.882 0 126 37 4 0 0 0 0.015974 1 18112 66.692 42.537 1 1.0782 1.2377 0 24635000 11241000 13394000 7954 215 3030 3107 12436 12436 EIDPENFK 8 1 0 Unmodified _EIDPENFK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.2404 2 496.24019 990.465826 87678.24 0.33182 0.00016466 0.14867 7.3775E-05 0.48048 0.00023844 496.240125143405 500.247312661108 49.54 0.54644 49.54 49.233 49.779 0 137 34 6 0 0 0 0.012794 2 27217 66.799 53.166 1 1.3258 1.4945 0 76009000 33871000 42138000 7955 1412 3031 3108 12437;12438 12438 EIDPENFK 8 1 0 Unmodified _EIDPENFK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.2475 2 496.24019 990.465826 87492.27 0.20443 0.00010145 0.20186 0.00010017 0.4063 0.00020162 496.24010487437 500.247304525036 57.253 0.59698 57.253 56.994 57.591 0 138 37 6 0 0 0 0.059544 1 28294 40.268 40.268 1 1.5849 1.2708 0 4192600 1667400 2525300 7956 1412 3031 3108 12439 12439 EIDVISIPSK 10 1 0 Unmodified _EIDVISIPSK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.8138 2 550.813522 1099.61249 82665.11 0.60137 0.00033125 -0.0063983 -3.5243E-06 0.59498 0.00032772 550.813520026628 554.820567003076 85.799 0.58431 85.799 85.568 86.153 0 328 50 9 0 0 0 1.7777E-08 3 51508 122.33 77.934 1 0.89614 1.009 0 73678000 40007000 33671000 7957 626 3032 3109 12440;12441;12442 12440 EIDVISIPSK 10 1 0 Unmodified _EIDVISIPSK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.8207 2 550.813522 1099.61249 82283.31 0.6541 0.00036028 -0.06835 -3.7648E-05 0.58575 0.00032264 550.813537585238 554.820525306471 84.832 0.69408 84.832 84.569 85.263 0 373 57 9 0 0 0 2.8483E-09 3 52066 125.82 65.057 1 0.91835 1.026 0 89730000 43848000 45883000 7958 626 3032 3109 12443;12444;12445 12444 EIDVISIPSK 10 1 0 Unmodified _EIDVISIPSK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.821 2 550.813522 1099.61249 83009.52 0.43877 0.00024168 0.23684 0.00013046 0.67561 0.00037214 550.813692282843 554.82069082881 97.906 0.68192 97.906 97.632 98.314 0 203 45 6 0 0 0 0.0099144 2 55099 54.066 28.541 1 1.1976 0.94553 0 5312400 2513500 2798900 7959 626 3032 3109 12446;12447 12446 EIDVISIPSK 10 1 0 Unmodified _EIDVISIPSK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.8201 2 550.813522 1099.61249 82377.11 0.50553 0.00027845 0.46393 0.00025554 0.96946 0.00053399 550.813890645154 554.820801828558 97.79 0.68592 97.79 97.523 98.209 7.6294E-06 183 41 6 0 0 0 0.0011505 2 54216 75.378 41.582 1 1.1559 0.93647 0 4382200 1966400 2415900 7960 626 3032 3109 12448;12449 12448 EIEALNFK 8 1 0 Unmodified _EIEALNFK_ 0 0 0 Q9NQX4;Q9P0E7 Q9NQX4 Q9NQX4 MYO5C Unconventional myosin-Vc MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2609 2 482.260925 962.507297 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.236 1 71.236 70.736 71.736 0 0 0 0 0.005003 1 42669 86.866 42.174 1 7961 2062 3033 3110 12450 12450 EIEDFDSLEALR 12 0 1 Unmodified _EIEDFDSLEALR_ 0 0 0 B4DY16;A0A024R1U0;P46060;B0QYT5;B0QYT4 B4DY16 B4DY16 RANGAP1 Ran GTPase-activating protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.8466 2 718.848821 1435.68309 73277.75 0.82722 0.00059465 -0.032557 -2.3404E-05 0.79466 0.00057124 718.848510095442 723.852802346798 103.52 0.52818 103.52 103.35 103.87 0 112 42 4 0 0 0 0.020956 1 63806 49.3 49.3 1 2.2023 2.2332 0 9796000 3541600 6254400 7962 90 3034 3111 12451 12451 EIEEESETTVEADLTDK 17 1 0 Unmodified _EIEEESETTVEADLTDK_ 0 0 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8 E7EQY4 E7EQY4 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 969.943 2 969.439122 1936.86369 62890.76 0.2728 0.00026446 0.23232 0.00022522 0.50511 0.00048968 969.439066744755 973.446685716776 76.103 0.49519 76.103 75.874 76.369 0 126 40 5 0 0 0 7.1332E-13 3 44980 120.87 97.226 1 0.63336 0.63144 0 9676600 5301000 4375600 7963 1221 3035 3112 12452;12453;12454 12454 EIEEESETTVEADLTDK 17 1 0 Unmodified _EIEEESETTVEADLTDK_ 0 0 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8 E7EQY4 E7EQY4 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 969.94 2 969.439122 1936.86369 62520.25 0.23243 0.00022532 0.26334 0.00025529 0.49577 0.00048061 969.439500147724 973.446858412436 75.367 0.57367 75.367 75.061 75.634 0 122 50 5 0 0 0 4.4394E-07 1 45259 96.059 79.145 1 0.69254 0.6913 0 14612000 5864800 8746700 7964 1221 3035 3112 12455 12455 EIEEESETTVEADLTDK 17 1 0 Unmodified _EIEEESETTVEADLTDK_ 0 0 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8 E7EQY4 E7EQY4 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 973.9487 2 969.439122 1936.86369 60922.13 -0.064995 -6.3008E-05 0.83335 0.00080788 0.76835 0.00074487 969.9425768084 973.447590285331 87.739 0.77614 87.739 87.473 88.25 0 182 48 8 0 0 0 8.0952E-18 2 48318 126.09 103.76 1 1.9112 1.5122 0 5038700 1976100 3062600 7965 1221 3035 3112 12456;12457 12456 EIEEESETTVEADLTDK 17 1 0 Unmodified _EIEEESETTVEADLTDK_ 0 0 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8 E7EQY4 E7EQY4 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 969.4396 2 969.439122 1936.86369 NaN NaN NaN 0.98678 0.00095663 NaN NaN NaN NaN 87.921 0.60112 87.921 87.756 88.357 0 0 0 0 0.00062945 1 47596 64.104 57.871 1 NaN NaN 0 3413900 3413900 0 7966 1221 3035 3112 12458 12458 EIEELQSQAQALSQEGK 17 1 0 Unmodified _EIEELQSQAQALSQEGK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 944.9703 2 944.468352 1886.92215 63441.68 0.72307 0.00068292 0.71939 0.00067944 1.4425 0.0013624 944.468720812248 948.476462583638 75.311 0.534 75.311 75.059 75.593 0 150 43 6 0 0 0 3.987E-35 2 44248 162.22 151.01 1 1.8879 2.01 0 15927000 6125700 9801600 7967 415 3036 3113 12459;12460 12460 EIEELQSQAQALSQEGK 17 1 0 Unmodified _EIEELQSQAQALSQEGK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 944.467 2 944.468352 1886.92215 63178.99 0.71573 0.00067598 0.43675 0.00041249 1.1525 0.0010885 944.969535223485 948.476325069559 74.376 0.52673 74.376 74.111 74.638 0 180 45 6 0 0 0 2.1933E-13 2 44677 123.95 115.54 1 2.0205 2.0922 0 18680000 6965700 11715000 7968 415 3036 3113 12461;12462 12462 EIEELQSQAQALSQEGK 17 1 0 Unmodified _EIEELQSQAQALSQEGK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 948.9765 2 944.468352 1886.92215 62926.45 0.48347 0.00045662 0.39348 0.00037163 0.87695 0.00082825 944.971255186795 948.475405261684 86.43 0.49713 86.43 86.192 86.689 0 143 34 7 0 0 0 2.5027E-05 1 47484 82.705 82.705 1 4.1067 3.2339 0 4026200 804830 3221300 7969 415 3036 3113 12463 12463 EIEELQSQAQALSQEGK 17 1 0 Unmodified _EIEELQSQAQALSQEGK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 948.9763 2 944.468352 1886.92215 62862.21 0.52653 0.00049729 -0.25582 -0.00024161 0.27071 0.00025568 944.466192993335 948.47498150686 86.687 0.50769 86.687 86.458 86.966 0 120 34 7 0 0 0 6.4048E-09 1 46706 101.38 101.38 1 4.2197 3.3284 0 3902000 754400 3147600 7970 415 3036 3113 12464 12464 EIEESKEPGVEDTEWSNTQTEEAIQTR 27 1 1 Unmodified _EIEESKEPGVEDTEWSNTQTEEAIQTR_ 0 0 1 A8K245;Q99986;H0YJF7 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1052.1553 3 1045.81274 3134.41638 60150.41 0.47503 0.0004968 -0.29133 -0.00030468 0.1837 0.00019212 1046.14660490927 1052.15400839577 73.26 0.32561 73.26 73.126 73.452 0 59 26 5 0 0 0 3.084E-10 1 43949 52.824 52.088 1 0.99205 1.1134 0 12783000 6810100 5973000 7971 707 3037 3114 12465 12465 EIEESKEPGVEDTEWSNTQTEEAIQTR 27 1 1 Unmodified _EIEESKEPGVEDTEWSNTQTEEAIQTR_ 0 0 1 A8K245;Q99986;H0YJF7 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1052.4889 3 1045.81274 3134.41638 58879.6 0.22986 0.00024039 -0.0030756 -3.2165E-06 0.22679 0.00023717 1046.48143292851 1052.15473509545 85.404 0.5345 85.404 85.17 85.704 0 270 33 12 0 0 0 2.4344E-06 2 46657 38.049 38.049 1 0.96276 0.83763 0 19692000 9775200 9917000 7972 707 3037 3114 12466;12467 12467 EIEESKEPGVEDTEWSNTQTEEAIQTR 27 1 1 Unmodified _EIEESKEPGVEDTEWSNTQTEEAIQTR_ 0 0 1 A8K245;Q99986;H0YJF7 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1046.4813 3 1045.81274 3134.41638 58605.27 0.30057 0.00031434 0.3366 0.00035202 0.63716 0.00066635 1046.48298001335 1052.15459452503 85.599 0.55659 85.599 85.359 85.916 0 278 33 11 0 0 0 0.00023838 1 45970 34.369 34.369 1 0.99384 0.84237 0 16358000 8599600 7758100 7973 707 3037 3114 12468 12468 EIEEYIHK 8 1 0 Unmodified _EIEEYIHK_ 0 0 0 P42285;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7706 2 530.769114 1059.52368 NaN NaN NaN -0.24612 -0.00013063 NaN NaN NaN NaN 34.062 0.44835 34.062 33.765 34.213 0 0 0 0 0.0059154 1 16927 84.244 50.24 1 NaN NaN 0 8797800 8797800 0 7974 1563 3038 3115 12469 12469 EIEEYIHK 8 1 0 Unmodified _EIEEYIHK_ 0 0 0 P42285;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.769 2 530.769114 1059.52368 82089.44 0.37011 0.00019644 1.1957 0.00063465 1.5658 0.00083109 530.768679075086 535.279151232252 33.127 0.59711 33.127 32.832 33.43 0 179 55 6 0 0 0 0.0022334 1 16496 101.64 88.376 1 1.3 1.3078 0 27171000 13740000 13430000 7975 1563 3038 3115 12470 12470 EIEGEEIEIVLAKPPDK 17 2 0 Unmodified _EIEGEEIEIVLAKPPDK_ 0 0 1 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;B4DMD1;Q7Z334 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234;DKFZp686O0665 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.0105 3 637.010335 1908.00917 77105.58 0.64676 0.00041199 0.40213 0.00025616 1.0489 0.00066815 637.3446923905 642.353977695511 96.329 0.46868 96.329 96.09 96.558 0 178 42 7 0 0 0 0.00030082 2 60058 39.982 39.982 1 1.4974 1.714 0 18913000 6405700 12507000 7976 855 3039 3116 12471;12472 12472 EIEHLVER 8 0 1 Unmodified _EIEHLVER_ 0 0 0 B2R6H3;Q8NI77;Q4G194 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.78 2 512.774731 1023.53491 85824.73 0.39885 0.00020452 -0.017962 -9.2105E-06 0.38089 0.00019531 512.774792207067 517.779159157952 28.994 0.293 28.994 28.776 29.069 0 42 14 6 0 0 0 0.022631 1 13888 57.047 12.653 1 0.71417 0.74326 0 21086000 11370000 9716300 7977 842 3040 3117 12473 12473 EIEIDIEPTDK 11 1 0 Unmodified _EIEIDIEPTDK_ 0 0 0 Q15843;F8VSA6;E9PS38;S4R3E9;E9PL57 Q15843 Q15843 NEDD8;NEDD8-MDP1 NEDD8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3353 2 651.32719 1300.63983 74686.01 0.97127 0.00063261 -0.28125 -0.00018319 0.69002 0.00044943 651.326694668591 655.334209787929 82.427 0.62216 82.427 82.083 82.705 0 247 52 8 0 0 0 7.5806E-09 2 49129 124.23 124.23 1 0.80718 0.91193 0 106660000 64740000 41915000 7978 1766 3041 3118 12474;12475 12475 EIEIDIEPTDK 11 1 0 Unmodified _EIEIDIEPTDK_ 0 0 0 Q15843;F8VSA6;E9PS38;S4R3E9;E9PL57 Q15843 Q15843 NEDD8;NEDD8-MDP1 NEDD8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.3345 2 651.32719 1300.63983 75343.56 1.0092 0.0006573 0.045083 2.9364E-05 1.0542 0.00068666 651.326952297553 655.334383470655 81.416 0.75239 81.416 81.169 81.921 0 282 64 8 0 0 0 7.9385E-10 2 49671 125.48 106.39 1 0.73195 0.81786 0 92441000 46827000 45614000 7979 1766 3041 3118 12476;12477 12477 EIEIDIEPTDK 11 1 0 Unmodified _EIEIDIEPTDK_ 0 0 0 Q15843;F8VSA6;E9PS38;S4R3E9;E9PL57 Q15843 Q15843 NEDD8;NEDD8-MDP1 NEDD8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3276 2 651.32719 1300.63983 75718.27 0.78211 0.00050941 0.39949 0.0002602 1.1816 0.00076961 651.327363588496 655.334428140616 93.941 0.666 93.941 93.614 94.28 0 245 44 8 0 0 0 1.8777E-05 2 52457 105.4 98.778 1 0.95406 0.74997 0 11183000 5759600 5423700 7980 1766 3041 3118 12478;12479 12479 EIEIDIEPTDK 11 1 0 Unmodified _EIEIDIEPTDK_ 0 0 0 Q15843;F8VSA6;E9PS38;S4R3E9;E9PL57 Q15843 Q15843 NEDD8;NEDD8-MDP1 NEDD8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.335 2 651.32719 1300.63983 NaN NaN NaN 0.38161 0.00024855 NaN NaN NaN NaN 93.867 0.71485 93.867 93.539 94.253 0 0 0 0 0.0012573 1 51505 84.615 65.636 1 NaN NaN 0 5305300 0 5305300 7981 1766 3041 3118 12480 12480 EIELGNEDYCIK 12 1 0 Unmodified _EIELGNEDYCIK_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.8498 2 741.842681 1481.67081 73788.07 0.74467 0.00055243 -0.35924 -0.0002665 0.38543 0.00028593 741.842509690247 746.350385915567 78.733 0.27656 78.733 78.556 78.833 0 64 23 4 0 0 0 0.00019323 2 46618 90.108 62.366 1 0.65247 0.66225 0 6108700 2850900 3257800 7982 1396 3042 3119 12481;12482 12482 EIELGNEDYCIK 12 1 0 Unmodified _EIELGNEDYCIK_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.8511 2 741.842681 1481.67081 71824.48 0.76244 0.00056561 -0.13593 -0.00010084 0.62651 0.00046477 742.343659601152 745.849695359801 77.749 0.31116 77.749 77.616 77.927 0 72 25 4 0 0 0 0.008946 1 47113 67.207 46.507 1 0.744 0.75124 0 8249900 4758700 3491200 7983 1396 3042 3119 12483 12483 EIELGNEDYCIK 12 1 0 Unmodified _EIELGNEDYCIK_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 745.851 2 741.842681 1481.67081 69228.06 0.65535 0.00048617 -0.9389 -0.00069652 -0.28355 -0.00021035 741.843302988623 745.850303403693 90.254 0.64865 90.254 89.894 90.543 0 190 46 7 0 0 0 0.0038145 2 49943 55.084 37.853 1 1.1669 0.90507 0 3487200 1836500 1650700 7984 1396 3042 3119 12484;12485 12484 EIELIGSGGFGQVFK 15 1 0 Unmodified _EIELIGSGGFGQVFK_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4;Q6PK38 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.4221 2 790.919581 1579.82461 69279.49 0.70609 0.00055846 -0.19316 -0.00015277 0.51293 0.00040569 790.919071644039 794.926217451106 117.86 0.59593 117.86 117.64 118.23 0 168 35 8 0 0 0 5.2424E-15 2 75434 125.74 118.81 1 1.3669 1.3622 0 26317000 10902000 15415000 7985 1111 3043 3120 12486;12487 12487 EIELIGSGGFGQVFK 15 1 0 Unmodified _EIELIGSGGFGQVFK_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4;Q6PK38 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.9196 2 790.919581 1579.82461 68395.05 0.67337 0.00053258 -0.46482 -0.00036764 0.20854 0.00016494 790.918867371705 794.9258314485 117.39 0.56678 117.39 117.15 117.71 -7.6294E-06 159 33 7 0 0 0 5.2424E-15 2 76897 125.74 125.74 1 1.2971 1.3557 0 34348000 16371000 17976000 7986 1111 3043 3120 12488;12489 12489 EIELPSGQLMGLFNR 15 0 1 Oxidation (M) _EIELPSGQLM(ox)GLFNR_ EIELPSGQLM(1)GLFNR EIELPSGQLM(135.86)GLFNR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.9463 2 860.440354 1718.86616 NaN NaN NaN -0.92591 -0.00079669 NaN NaN NaN NaN 116.87 0.5395 116.87 116.53 117.07 0 0 0 0 1.8826E-23 1 74519 135.86 64.408 1 NaN NaN 0 87470000 0 87470000 7987 2023 3044 3121 12490 12490 1860 EIELPSGQLMGLFNR 15 0 1 Oxidation (M) _EIELPSGQLM(ox)GLFNR_ EIELPSGQLM(1)GLFNR EIELPSGQLM(145.46)GLFNR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.4454 2 860.440354 1718.86616 NaN NaN NaN 0.094726 8.1506E-05 NaN NaN NaN NaN 116.48 0.68632 116.48 116 116.69 -7.6294E-06 0 0 0 2.4284E-32 2 75993 145.46 75.357 1 NaN NaN 0 98424000 0 98424000 7988 2023 3044 3121 12491;12492 12491 1860 EIELPSGQLMGLFNR 15 0 1 Oxidation (M) _EIELPSGQLM(ox)GLFNR_ EIELPSGQLM(1)GLFNR EIELPSGQLM(112.15)GLFNR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.4421 2 860.440354 1718.86616 63881.01 0.98497 0.0008475 0.91685 0.0007889 1.9018 0.0016364 860.441331697959 865.446567396247 128.68 0.97061 128.68 128.35 129.32 0 184 44 9 0 0 0 1.2989E-08 3 77664 112.15 103.63 1 1.0281 0.88336 0 43707000 21937000 21770000 7989 2023 3044 3121 12493;12494;12495 12493 1860 EIELPSGQLMGLFNR 15 0 1 Oxidation (M) _EIELPSGQLM(ox)GLFNR_ EIELPSGQLM(1)GLFNR EIELPSGQLM(94.62)GLFNR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 865.445 2 860.440354 1718.86616 NaN NaN NaN -0.75246 -0.00064745 NaN NaN NaN NaN 128.41 0.55658 128.41 128.16 128.72 0 0 0 0 2.8798E-07 1 76603 94.616 44.324 1 NaN NaN 0 22364000 0 22364000 7990 2023 3044 3121 12496 12496 1860 EIELPSGQLMGLFNR 15 0 1 Unmodified _EIELPSGQLMGLFNR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.4443 2 852.442897 1702.87124 NaN NaN NaN -0.39229 -0.0003344 NaN NaN NaN NaN 125.9 0.3439 125.9 125.71 126.05 -7.6294E-06 0 0 0 0.00046856 1 81948 72.2 55.569 1 NaN NaN 0 3218600 3218600 0 7991 2023 3044 3122 12497 12497 EIELPSGQLMGLFNR 15 0 1 Unmodified _EIELPSGQLMGLFNR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 857.9489 2 852.442897 1702.87124 NaN NaN NaN -0.51293 -0.00043724 NaN NaN NaN NaN 134.72 0.27393 134.72 134.53 134.8 0 0 0 0 0.00026423 1 82418 76.332 42.371 1 NaN NaN 0 20323000 0 20323000 7992 2023 3044 3122 12498 12498 EIELPSGQLMGLFNR 15 0 1 Unmodified _EIELPSGQLMGLFNR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.6694 2 852.442897 1702.87124 NaN NaN NaN -0.89992 -0.00076713 NaN NaN NaN NaN 134.68 0.15112 134.68 134.56 134.71 0 0 0 0 0.017166 1 81456 44.765 18.826 1 NaN NaN 0 15206000 0 15206000 7993 2023 3044 3122 12499 12499 EIEQVYR 7 0 1 Unmodified _EIEQVYR_ 0 0 0 F8W0Q9;F8WF16;B7Z615;B7Z8L1;F8W6A0;B7Z8M9;B7Z695;Q8NEY8 F8W0Q9 F8W0Q9 PPHLN1 Periphilin-1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.7468 2 468.742899 935.471246 NaN NaN NaN 0.24279 0.00011381 NaN NaN NaN NaN 35.468 0.45522 35.468 35.235 35.69 0 0 0 0 0.03244 1 15814 66.994 20.642 1 NaN NaN 0 568210 0 568210 7994 1264 3045 3123 12500 12500 EIEQVYR 7 0 1 Unmodified _EIEQVYR_ 0 0 0 F8W0Q9;F8WF16;B7Z615;B7Z8L1;F8W6A0;B7Z8M9;B7Z695;Q8NEY8 F8W0Q9 F8W0Q9 PPHLN1 Periphilin-1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.7473 2 468.742899 935.471246 NaN NaN NaN -0.39885 -0.00018696 NaN NaN NaN NaN 35.409 0.22371 35.409 35.326 35.55 0 0 0 0 0.03244 1 15286 66.994 20.642 1 NaN NaN 0 983700 0 983700 7995 1264 3045 3123 12501 12501 EIERPFETYK 10 1 1 Unmodified _EIERPFETYK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.3443 2 656.33261 1310.65067 75575.74 0.75264 0.00049398 -0.16552 -0.00010864 0.58711 0.00038534 656.332590907401 665.34379317254 43.793 0.63731 43.793 43.435 44.073 0 243 56 6 0 0 0 0.0019007 2 23333 89.08 70.407 1 1.9058 2.2918 0 83062000 29370000 53692000 7996 1569 3046 3124 12502;12503 12503 EIERPFETYK 10 1 1 Unmodified _EIERPFETYK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.8979 3 437.890832 1310.65067 90580.78 0.089582 3.9227E-05 -0.69666 -0.00030506 -0.60708 -0.00026583 437.890059595959 443.898117266075 43.853 1.3258 43.853 43.264 44.59 0 519 117 7 0 0 0 0.00058182 2 23326 63.624 63.624 1 1.9905 2.3979 0 109520000 33429000 76088000 7997 1569 3046 3124 12504;12505 12504 EIERPFETYK 10 1 1 Unmodified _EIERPFETYK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.8991 3 437.890832 1310.65067 90886.77 0.33362 0.00014609 -0.55083 -0.0002412 -0.21721 -9.5116E-05 437.890323224677 443.898118928547 42.494 0.88186 42.494 42.175 43.057 0 404 72 9 0 0 0 0.00018956 2 22779 76.143 76.143 1 1.791 2.1166 0 155350000 53696000 101650000 7998 1569 3046 3124 12506;12507 12506 EIERPFETYK 10 1 1 Unmodified _EIERPFETYK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.344 2 656.33261 1310.65067 76057.8 0.83954 0.00055102 -0.20856 -0.00013689 0.63098 0.00041413 656.332624259093 665.343688762732 42.557 0.75881 42.557 42.184 42.943 0 271 62 7 0 0 0 1.5803E-29 3 22895 179.1 179.1 1 1.6903 1.9925 0 104350000 38115000 66231000 7999 1569 3046 3124 12508;12509;12510 12510 EIERPFETYK 10 1 1 Unmodified _EIERPFETYK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 443.8982 3 437.890832 1310.65067 90096.75 -0.11819 -5.1752E-05 -0.054787 -2.3991E-05 -0.17297 -7.5743E-05 437.890719506704 443.898298326259 50.199 1.6062 50.199 49.836 51.442 0 526 121 9 0 0 0 0.0033815 1 24460 48.284 38.851 1 3.3846 2.9882 0 41088000 10405000 30683000 8000 1569 3046 3124 12511 12511 EIERPFETYK 10 1 1 Unmodified _EIERPFETYK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.3328 2 656.33261 1310.65067 73477.55 0.52499 0.00034457 -0.18222 -0.0001196 0.34277 0.00022497 656.332496565835 665.343965588676 50.153 1.5487 50.153 49.792 51.341 0 566 118 9 0 0 0 0.03688 1 24554 58.246 58.246 1 3.0032 2.6387 0 32299000 7953900 24345000 8001 1569 3046 3124 12512 12512 EIERPFETYK 10 1 1 Unmodified _EIERPFETYK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.8983 3 437.890832 1310.65067 89488.05 -0.20497 -8.9756E-05 -0.064472 -2.8232E-05 -0.26945 -0.00011799 437.890765039708 443.898257166093 50.414 1.7044 50.414 50.018 51.722 0 537 124 9 0 0 0 0.0052968 2 24054 49.189 39.756 1 3.3759 2.871 0 32604000 6153300 26451000 8002 1569 3046 3124 12513;12514 12513 EIERPFETYK 10 1 1 Unmodified _EIERPFETYK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.3441 2 656.33261 1310.65067 74418.5 0.30194 0.00019817 -0.010717 -7.034E-06 0.29122 0.00019114 656.332752460221 665.343876331176 50.409 0.98859 50.409 50.034 51.022 0 482 75 9 0 0 0 0.00042359 2 24073 98.04 98.04 1 3.1822 2.704 0 27499000 6489700 21009000 8003 1569 3046 3124 12515;12516 12515 EIESEIDSEEELINK 15 1 0 Unmodified _EIESEIDSEEELINK_ 0 0 0 Q14566;Q4ZG57 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.9305 2 888.922911 1775.83127 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.511 1 86.511 86.011 87.011 0 0 0 0 2.1981E-09 1 52105 107.85 88.085 1 8004 1734 3047 3125 12517 12517 EIESEIDSEEELINK 15 1 0 Unmodified _EIESEIDSEEELINK_ 0 0 0 Q14566;Q4ZG57 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.4354 2 888.922911 1775.83127 NaN NaN NaN 0.42401 0.00037691 NaN NaN NaN NaN 85.86 0.32415 85.86 85.664 85.988 0 0 0 0 0.00053082 2 52910 70.942 55.676 1 NaN NaN 0 4867700 0 4867700 8005 1734 3047 3125 12518;12519 12519 EIESSPQYR 9 0 1 Unmodified _EIESSPQYR_ 0 0 0 A0A024QZC0;A0A024QZB7;A0A024QZ91;Q8WWM7;H3BSK9;H3BUF6 A0A024QZC0 A0A024QZC0 ATXN2L Ataxin-2-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.7726 2 554.767103 1107.51965 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.958 1 23.958 23.458 24.458 0 0 0 0 0.0031169 1 9767 75.738 41.485 1 8006 14 3048 3126 12520 12520 EIETTGQIMHR 11 0 1 Oxidation (M) _EIETTGQIM(ox)HR_ EIETTGQIM(1)HR EIETTGQIM(87.48)HR 0 1 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.8299 2 665.824626 1329.6347 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.86 1 21.86 21.36 22.36 0 0 0 0 1.4568E-05 1 8061 87.476 28.495 1 8007 1843 3049 3127 12521 12521 1695 EIETYHNLLEGGQEDFESSGAGK 23 1 0 Unmodified _EIETYHNLLEGGQEDFESSGAGK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.7168 3 837.382107 2509.12449 NaN NaN NaN -0.35888 -0.00030052 NaN NaN NaN NaN 84.327 1.736 84.327 83.975 85.711 -7.6294E-06 0 0 0 8.1118E-124 2 50690 208.28 204.69 1 NaN NaN 0 902620000 902620000 0 + 8008 1165 3050 3128 12522;12523 12522 EIETYHNLLEGGQEDFESSGAGK 23 1 0 Unmodified _EIETYHNLLEGGQEDFESSGAGK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.7172 3 837.382107 2509.12449 NaN NaN NaN -0.28945 -0.00024238 NaN NaN NaN NaN 83.474 1.6609 83.474 82.951 84.611 0 0 0 0 2.6739E-62 1 51324 158.52 158.52 1 NaN NaN 0 799650000 799650000 0 + 8009 1165 3050 3128 12524 12524 EIETYHNLLEGGQEDFESSGAGK 23 1 0 Unmodified _EIETYHNLLEGGQEDFESSGAGK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.3838 3 837.382107 2509.12449 NaN NaN NaN -0.13773 -0.00011533 NaN NaN NaN NaN 84.71 0.36755 84.71 84.556 84.923 0 0 0 0 2.5057E-05 1 51937 47.931 44.693 1 NaN NaN 0 8740500 8740500 0 + 8010 1165 3050 3128 12525 12525 EIETYHNLLEGGQEDFESSGAGK 23 1 0 Unmodified _EIETYHNLLEGGQEDFESSGAGK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.7166 3 837.382107 2509.12449 NaN NaN NaN -0.21025 -0.00017606 NaN NaN NaN NaN 96.784 2.3199 96.784 96.454 98.774 0 0 0 0 1.0032E-24 2 54211 110.4 107.52 1 NaN NaN 0 313940000 313940000 0 + 8011 1165 3050 3128 12526;12527 12526 EIETYHNLLEGGQEDFESSGAGK 23 1 0 Unmodified _EIETYHNLLEGGQEDFESSGAGK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 837.7164 3 837.382107 2509.12449 NaN NaN NaN -0.19716 -0.0001651 NaN NaN NaN NaN 96.669 2.6308 96.669 95.914 98.545 0 0 0 0 7.1936E-25 2 53377 112.64 108.76 1 NaN NaN 0 329280000 329280000 0 + 8012 1165 3050 3128 12528;12529 12528 EIEYEVVR 8 0 1 Unmodified _EIEYEVVR_ 0 0 0 Q53SY7;F8VPD4;P27708;Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209;Q5R207 Q53SY7;Q5R210 Q53SY7 CAD;CPS1 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase;Carbamoyl-phosphate synthase [ammonia], mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.7734 2 518.769114 1035.52368 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.391 1 55.391 54.891 55.891 3.8147E-06 0 0 0 0.0083405 1 31137 79.116 28.15 1 8013 1259;148 3051 3129 12530 12530 EIFDIAFPDEQAEALAVER 19 0 1 Unmodified _EIFDIAFPDEQAEALAVER_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1087.5399 2 1082.03386 2162.05316 56490.28 0.43 0.00046527 0.72397 0.00078336 1.154 0.0012486 1082.53526762847 1087.54002759664 125.91 0.55427 125.91 125.69 126.25 7.6294E-06 177 40 8 0 0 0 1.3424E-05 2 81840 69.345 69.345 1 3.656 3.8003 0 20925000 3857600 17068000 8014 946 3052 3130 12531;12532 12531 EIFDIAFPDEQAEALAVER 19 0 1 Unmodified _EIFDIAFPDEQAEALAVER_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1087.0411 2 1082.03386 2162.05316 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.1 1 126.1 125.6 126.6 0 0 0 0 0.0076827 1 82033 44.616 36.705 1 8015 946 3052 3130 12533 12533 EIFDIAFPDEQAEALAVER 19 0 1 Unmodified _EIFDIAFPDEQAEALAVER_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1087.5402 2 1082.03386 2162.05316 57295.18 0.5221 0.00056493 0.61363 0.00066397 1.1357 0.0012289 1082.53572682761 1087.53989071262 125.57 0.43324 125.57 125.35 125.79 0 151 28 8 0 0 0 1.0866E-16 3 83614 116.96 116.96 1 4.1788 4.2683 0 20771000 3109200 17662000 8016 946 3052 3130 12534;12535;12536 12534 EIFEQPESVVNTMR 14 0 1 Oxidation (M) _EIFEQPESVVNTM(ox)R_ EIFEQPESVVNTM(1)R EIFEQPESVVNTM(56.4)R 0 1 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.9067 2 847.906344 1693.79814 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.464 1 76.464 75.964 76.964 -7.6294E-06 0 0 0 0.0019196 1 46157 56.404 40.775 1 8017 1688 3053 3131 12537 12537 1506 EIFITFR 7 0 1 Unmodified _EIFITFR_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.2646 2 463.260728 924.506903 90634.91 0.76159 0.00035281 -0.35028 -0.00016227 0.4113 0.00019054 463.260194000294 468.264804870477 95.387 0.67921 95.387 95.129 95.809 -7.6294E-06 145 56 4 0 0 0 0.03394 1 59376 63.148 37.321 1 1.4164 1.4298 0 10249000 4536400 5712300 8018 1786 3054 3132 12538 12538 EIFLSQPILLELEAPLK 17 1 0 Unmodified _EIFLSQPILLELEAPLK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;F8WE71;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.0768 2 977.068985 1952.12342 59401.26 0.16637 0.00016256 -0.36763 -0.0003592 -0.20126 -0.00019665 977.568500051731 981.076514497196 133.57 0.17754 133.57 133.46 133.64 0 18 2 9 0 0 0 3.9665E-45 1 87598 168.76 168.76 1 1.2342 1.4109 0 183290000 85567000 97723000 8019 1632;343;1633 3055 3133 12539 12539 EIFLSQPILLELEAPLK 17 1 0 Unmodified _EIFLSQPILLELEAPLK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;F8WE71;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.0762 2 977.068985 1952.12342 65915 0.19389 0.00018944 -0.42706 -0.00041726 -0.23317 -0.00022782 977.570450177717 981.577144722696 142.54 0.29697 142.54 142.43 142.73 -1.5259E-05 62 29 4 0 0 0 0.013837 1 92137 29.299 29.299 1 1.5616 1.7339 0 1120300 512160 608170 8020 1632;343;1633 3055 3133 12540 12540 EIFLSQPILLELEAPLK 17 1 0 Unmodified _EIFLSQPILLELEAPLK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;F8WE71;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 981.5904 2 977.068985 1952.12342 61925.74 0.2904 0.00028374 -0.57425 -0.00056108 -0.28385 -0.00027734 977.56924345941 981.576932504837 134.91 0.37857 134.91 134.8 135.18 0 31 11 9 0 0 0 4.6995E-18 2 82587 131.06 131.06 1 2.2403 1.9316 0 99329000 29480000 69848000 8021 1632;343;1633 3055 3133 12541;12542 12541 EIFLSQPILLELEAPLK 17 1 0 Unmodified _EIFLSQPILLELEAPLK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;F8WE71;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 981.5779 2 977.068985 1952.12342 59739.88 0.5241 0.00051208 -0.81916 -0.00080038 -0.29506 -0.0002883 977.568715108318 981.075365649575 134.87 0.19141 134.87 134.76 134.95 0 15 3 7 0 0 0 6.9677E-05 1 81740 70.438 70.438 1 2.6514 2.196 0 34102000 8960400 25142000 8022 1632;343;1633 3055 3133 12543 12543 EIFLTVPVGGGESLR 15 0 1 Unmodified _EIFLTVPVGGGESLR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.434 2 787.432855 1572.85116 68136.14 0.90838 0.00071529 0.22543 0.00017751 1.1338 0.0008928 787.433139958026 792.437021737005 112.79 0.87493 112.79 112.42 113.3 7.6294E-06 462 63 10 0 0 0 0.00010473 2 71071 82.171 82.171 1 1.017 1.1919 0 214640000 105020000 109610000 8023 1789 3056 3134 12544;12545 12545 EIFLTVPVGGGESLR 15 0 1 Unmodified _EIFLTVPVGGGESLR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.4335 2 787.432855 1572.85116 68344.63 0.9858 0.00077625 -0.070575 -5.5573E-05 0.91523 0.00072068 787.432948678455 792.436777131742 112.18 0.85341 112.18 111.84 112.7 0 450 63 9 0 0 0 5.7507E-07 2 72453 100.93 100.93 1 1.0008 1.1592 0 285670000 147730000 137940000 8024 1789 3056 3134 12546;12547 12547 EIFLTVPVGGGESLR 15 0 1 Unmodified _EIFLTVPVGGGESLR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 787.4333 2 787.432855 1572.85116 68472.14 0.82346 0.00064842 0.23533 0.0001853 1.0588 0.00083372 787.433264499512 792.43704669569 123.87 1.538 123.87 123.53 125.07 -7.6294E-06 352 66 11 0 0 0 0.0001724 2 73961 78.096 78.096 1 1.3932 1.2067 0 147760000 60678000 87079000 8025 1789 3056 3134 12548;12549 12549 EIFLTVPVGGGESLR 15 0 1 Unmodified _EIFLTVPVGGGESLR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.4328 2 787.432855 1572.85116 68180.67 0.8644 0.00068066 0.41802 0.00032916 1.2824 0.0010098 787.433507137519 792.437173220483 123.73 1.5354 123.73 123.32 124.85 -7.6294E-06 310 64 11 0 0 0 0.00018076 3 72945 77.593 77.593 1 1.4227 1.2422 0 125570000 53756000 71810000 8026 1789 3056 3134 12550;12551;12552 12551 EIFNFVLK 8 1 0 Unmodified _EIFNFVLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.8447 2 505.289485 1008.56442 84715.24 0.92241 0.00046608 -0.11849 -5.9874E-05 0.80392 0.00040621 505.289373914878 509.296379902886 110.44 0.73071 110.44 110.14 110.87 0 240 51 6 0 0 0 0.013659 3 69165 64.803 55.441 1 0.6673 0.7515 0 123320000 74207000 49108000 8027 1665 3057 3135 12553;12554;12555 12554 EIFNFVLK 8 1 0 Unmodified _EIFNFVLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.2899 2 505.289485 1008.56442 85576.55 0.50885 0.00025712 -0.030399 -1.536E-05 0.47845 0.00024176 505.289440804848 509.296385619549 109.77 0.81439 109.77 109.45 110.27 -7.6294E-06 236 51 7 0 0 0 0.014377 2 70334 63.148 53.554 1 0.59177 0.6576 0 50334000 29419000 20916000 8028 1665 3057 3135 12556;12557 12557 EIFNFVLK 8 1 0 Unmodified _EIFNFVLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.2901 2 505.289485 1008.56442 86710.86 0.58899 0.00029761 0.042326 2.1387E-05 0.63132 0.000319 505.289373616218 509.296488156732 121.49 0.73788 121.49 121.28 122.02 0 136 36 7 0 0 0 0.0060143 1 72273 88.643 88.643 1 0.31688 0.24576 0 13957000 10613000 3344200 8029 1665 3057 3135 12558 12558 EIFNFVLK 8 1 0 Unmodified _EIFNFVLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.2898 2 505.289485 1008.56442 85943.2 0.50928 0.00025733 -0.035315 -1.7844E-05 0.47396 0.00023949 505.289347393295 509.296506891763 121.28 0.67557 121.28 121.01 121.68 -7.6294E-06 134 35 7 0 0 0 0.013659 2 71147 64.803 64.803 1 0.35117 0.28198 0 14679000 11398000 3280800 8030 1665 3057 3135 12559;12560 12559 EIGDYIR 7 0 1 Unmodified _EIGDYIR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.2244 2 433.224342 864.434132 91649.55 -0.011745 -5.0881E-06 0.76269 0.00033042 0.75095 0.00032533 433.224283357753 438.228574940767 50.674 0.63137 50.674 50.234 50.866 3.8147E-06 241 59 6 0 0 0 0.021813 1 27934 92.692 42.573 1 0.88234 1.002 0 110090000 59659000 50426000 8031 1398 3058 3136 12561 12561 EIGDYIR 7 0 1 Unmodified _EIGDYIR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.2242 2 433.224342 864.434132 91406.53 0.014684 6.3614E-06 0.86008 0.00037261 0.87476 0.00037897 433.224302315357 438.228515151725 49.444 0.53315 49.444 49.145 49.679 0 223 44 9 0 0 0 0.014426 1 27762 100.07 47.383 1 0.99074 1.1341 0 164940000 85755000 79187000 8032 1398 3058 3136 12562 12562 EIGDYIR 7 0 1 Unmodified _EIGDYIR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 433.2242 2 433.224342 864.434132 91397.42 -0.16807 -7.2812E-05 0.38097 0.00016505 0.2129 9.2233E-05 433.224315796243 438.228421844482 58.36 0.84644 58.36 57.891 58.737 -3.8147E-06 296 63 7 0 0 0 0.055196 2 29072 52.683 26.574 1 0.73039 0.59471 0 9686200 5576500 4109700 8033 1398 3058 3136 12563;12564 12564 EIGGLTQVNK 10 1 0 Unmodified _EIGGLTQVNK_ 0 0 0 A0A0S2Q0B1;O14497;H0Y488;A0A1B0GTU5;A0A087WUV6;Q96TA9;Q4LE49 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.7969 2 529.795663 1057.57677 NaN NaN NaN 1.1026 0.00058414 NaN NaN NaN NaN 42.032 0.43235 42.032 41.745 42.178 0 0 0 0 0.026708 1 22179 52.867 19.316 1 NaN NaN 0 8727400 8727400 0 8034 544 3059 3137 12565 12565 EIGLLADEIEIYGK 14 1 0 Unmodified _EIGLLADEIEIYGK_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.9236 2 781.919246 1561.82394 73016.44 0.68353 0.00053447 -0.087721 -6.8591E-05 0.59581 0.00046588 781.918874505659 785.926392222784 117.48 0.41725 117.48 117.25 117.67 0 93 28 5 0 0 0 0.00023489 3 75103 64.374 46.213 1 1.5558 1.5728 0 5628100 1949900 3678200 8035 418 3060 3138 12566;12567;12568 12567 EIGLLADEIEIYGK 14 1 0 Unmodified _EIGLLADEIEIYGK_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.9275 2 781.919246 1561.82394 71684.75 0.71693 0.00056058 0.29211 0.00022841 1.009 0.00078899 782.421065843525 785.926627787437 116.94 0.42031 116.94 116.77 117.19 -7.6294E-06 48 24 5 0 0 0 3.8972E-05 1 76604 94.767 80.861 1 1.1875 1.1821 0 6304800 2484400 3820400 8036 418 3060 3138 12569 12569 EIGLLSEEVELYGETK 16 1 0 Unmodified _EIGLLSEEVELYGETK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 908.9684 2 904.961839 1807.90913 68894.02 0.59813 0.00054128 -1.4528 -0.0013148 -0.85471 -0.00077348 905.462660107227 908.966934858104 113.24 0.49284 113.24 113.03 113.53 -7.6294E-06 86 34 4 0 0 0 0.00015124 1 73504 63.091 63.091 1 1.146 1.1889 0 9856800 4783300 5073500 8037 196 3061 3139 12570 12570 EIGLLSEEVELYGETK 16 1 0 Unmodified _EIGLLSEEVELYGETK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 909.4718 2 904.961839 1807.90913 66841.34 0.59189 0.00053564 0.00088145 7.9768E-07 0.59277 0.00053643 904.961161134945 909.470689055853 125.14 0.37196 125.14 124.95 125.32 0 41 15 4 0 0 0 0.0052246 1 75028 36 36 1 1.0348 0.84878 0 2426700 1409100 1017600 8038 196 3061 3139 12571 12571 EIGLLSEEVELYGETK 16 1 0 Unmodified _EIGLLSEEVELYGETK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 909.4714 2 904.961839 1807.90913 NaN NaN NaN 0.18868 0.00017075 NaN NaN NaN NaN 124.96 0.3351 124.96 124.79 125.13 0 0 0 0 0.05401 1 74037 33.685 24.253 1 NaN NaN 0 684170 0 684170 8039 196 3061 3139 12572 12572 EIGQSVDEVEK 11 1 0 Unmodified _EIGQSVDEVEK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8057 2 616.803882 1231.59321 77860.29 0.68574 0.00042297 -0.11734 -7.2373E-05 0.56841 0.00035059 616.803889794613 620.810836242211 37.031 0.45969 37.031 36.72 37.18 0 129 42 4 0 0 0 1.0988E-05 3 18716 108.43 72.051 1 1.7954 1.849 0 14561000 5794500 8766600 8040 415 3062 3140 12573;12574;12575 12573 EIGQSVDEVEK 11 1 0 Unmodified _EIGQSVDEVEK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8043 2 616.803882 1231.59321 77050.49 0.5663 0.0003493 -0.031564 -1.9469E-05 0.53474 0.00032983 616.804008672122 620.810905239725 36.205 0.40364 36.205 35.976 36.38 0 110 34 4 0 0 0 0.0004546 1 18523 77.192 48.983 1 1.8096 1.954 0 22594000 7409000 15185000 8041 415 3062 3140 12576 12576 EIGWTDVGGWTGQGGSILGTK 21 1 0 Unmodified _EIGWTDVGGWTGQGGSILGTK_ 0 0 0 Q01813;Q8WTZ9;O14943;H0Y3Y3 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1064.5361 2 1060.02637 2118.03818 61087.57 1.0431 0.0011057 -0.099075 -0.00010502 0.94398 0.0010006 1060.52887678573 1064.53465559691 117.1 0.44473 117.1 116.87 117.32 0 137 32 7 0 0 0 1.8326E-08 2 74873 79.652 79.652 1 2.263 2.3864 0 15480000 5510600 9969600 8042 1677 3063 3141 12577;12578 12577 EIGWTDVGGWTGQGGSILGTK 21 1 0 Unmodified _EIGWTDVGGWTGQGGSILGTK_ 0 0 0 Q01813;Q8WTZ9;O14943;H0Y3Y3 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.5371 2 1060.02637 2118.03818 59291.54 0.47056 0.0004988 0.22423 0.00023769 0.69479 0.00073649 1060.52824467661 1064.5350977149 116.68 0.43172 116.68 116.44 116.87 0 118 26 7 0 0 0 2.3143E-07 3 76328 61.444 61.444 1 2.163 2.2091 0 17260000 5413000 11847000 8043 1677 3063 3141 12579;12580;12581 12579 EIHQFNR 7 0 1 Unmodified _EIHQFNR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.2452 2 472.240858 942.467164 89026.31 0.27258 0.00012872 0.27201 0.00012845 0.54458 0.00025717 472.240761856705 477.245061573921 18.391 0.31461 18.391 18.161 18.476 1.9073E-06 48 16 5 0 0 0 0.013114 1 5319 103.71 90.04 1 1.4971 1.5489 0 13826000 6555800 7270600 8044 415 3064 3142 12582 12582 EIIDLVLDR 9 0 1 Unmodified _EIIDLVLDR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.3141 2 543.313689 1084.61282 81249.48 1.0168 0.00055246 -0.049221 -2.6743E-05 0.96762 0.00052572 543.313676823039 548.317725910241 110.33 1.3895 110.33 109.82 111.21 0 467 96 10 0 0 0 1.0629E-05 3 69625 126.52 126.52 1 1.4779 1.7542 0 763130000 304490000 458640000 8045 922;1257;1869 3065 3143 12583;12584;12585 12585 EIIDLVLDR 9 0 1 Unmodified _EIIDLVLDR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.3187 2 543.313689 1084.61282 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.52 1 111.52 111.02 112.02 7.6294E-06 0 0 0 0.011112 1 70223 62.582 38.61 1 8046 922;1257;1869 3065 3143 12586 12586 EIIDLVLDR 9 0 1 Unmodified _EIIDLVLDR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.3141 2 543.313689 1084.61282 82246.88 0.65349 0.00035505 -0.080833 -4.3918E-05 0.57266 0.00031113 543.313591215528 548.317706056794 109.71 1.4317 109.71 109.24 110.68 0 499 96 10 0 0 0 6.905E-05 3 70250 111.17 111.17 1 1.4537 1.6882 0 349500000 142930000 206570000 8047 922;1257;1869 3065 3143 12587;12588;12589 12587 EIIDLVLDR 9 0 1 Unmodified _EIIDLVLDR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.3179 2 543.313689 1084.61282 NaN NaN NaN 0.27087 0.00014717 NaN NaN NaN NaN 110.89 0.11012 110.89 110.84 110.95 0 0 0 0 0.048213 1 71463 47.603 23.631 1 NaN NaN 0 1252800 0 1252800 8048 922;1257;1869 3065 3143 12590 12590 EIIDLVLDR 9 0 1 Unmodified _EIIDLVLDR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.3138 2 543.313689 1084.61282 81325.85 0.83538 0.00045387 0.013928 7.5674E-06 0.8493 0.00046144 543.31353653165 548.317816697181 121.2 0.72655 121.2 120.91 121.64 -7.6294E-06 139 33 7 0 0 0 0.005479 2 71964 66.621 40.019 1 1.0812 0.88348 0 15874000 8183700 7690000 8049 922;1257;1869 3065 3143 12591;12592 12592 EIIDLVLDR 9 0 1 Unmodified _EIIDLVLDR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.3176 2 543.313689 1084.61282 82852.03 0.71166 0.00038665 0.10857 5.899E-05 0.82023 0.00044564 543.313633912828 548.317790241926 121.05 0.74329 121.05 120.67 121.42 0 164 35 8 0 0 0 0.0019814 1 70919 78.334 78.334 1 1.1873 1.031 0 24187000 11017000 13170000 8050 922;1257;1869 3065 3143 12593 12593 EIIDPVLDR 9 0 1 Unmodified _EIIDPVLDR_ 0 0 0 P68366;C9JEV8;C9JQ00;C9JJQ8 P68366 P68366 TUBA4A Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.3032 2 535.298039 1068.58152 82923.08 0.40617 0.00021742 -0.094511 -5.0592E-05 0.31166 0.00016683 535.298016214545 540.302197252102 81.133 0.91967 81.133 80.734 81.654 -7.6294E-06 344 78 6 0 0 0 0.010363 2 48126 59.35 29.165 1 1.6081 1.7174 0 44565000 16863000 27703000 8051 1659 3066 3144 12594;12595 12594 EIIDPVLDR 9 0 1 Unmodified _EIIDPVLDR_ 0 0 0 P68366;C9JEV8;C9JQ00;C9JJQ8 P68366 P68366 TUBA4A Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.2983 2 535.298039 1068.58152 82289.12 0.72812 0.00038976 -0.19441 -0.00010407 0.53372 0.0002857 535.298017637938 540.302139072223 80.077 0.75844 80.077 79.784 80.542 0 329 60 8 0 0 0 0.0018407 2 48665 80.165 36.717 1 1.4198 1.6436 0 67473000 27038000 40435000 8052 1659 3066 3144 12596;12597 12596 EIIDPVLDR 9 0 1 Unmodified _EIIDPVLDR_ 0 0 0 P68366;C9JEV8;C9JQ00;C9JJQ8 P68366 P68366 TUBA4A Tubulin alpha-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.2983 2 535.298039 1068.58152 83196.12 0.54003 0.00028908 -0.23634 -0.00012651 0.30369 0.00016257 535.298130192442 540.301971620796 92.196 0.73262 92.196 91.795 92.527 0 165 41 6 0 0 0 0.026085 1 51294 47.603 21.866 1 1.2733 1.076 0 4856100 2225500 2630500 8053 1659 3066 3144 12598 12598 EIIEVLQK 8 1 0 Unmodified _EIIEVLQK_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.2927 2 486.292225 970.569897 88451.12 0.43296 0.00021055 -0.039279 -1.9101E-05 0.39369 0.00019145 486.292430575627 490.298895674417 70.505 0.63163 70.505 70.156 70.787 0 219 51 7 0 0 0 0.0049823 1 42103 91.906 10.293 1 0.76767 0.80346 0 34495000 19276000 15219000 8054 1761 3067 3145 12599 12599 EIIEVLQK 8 1 0 Unmodified _EIIEVLQK_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.2923 2 486.292225 970.569897 87037.99 0.19011 9.245E-05 -0.12425 -6.0421E-05 0.065864 3.2029E-05 486.292240838389 490.299136424123 81.445 1.1684 81.445 81.003 82.172 0 251 71 7 0 0 0 0.0080127 2 44097 80.462 8.7476 1 0.9435 0.75565 0 7302200 3772300 3529900 8055 1761 3067 3145 12600;12601 12601 EIIEVLQK 8 1 0 Unmodified _EIIEVLQK_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.2925 2 486.292225 970.569897 88051.13 0.31085 0.00015116 -0.093114 -4.5281E-05 0.21774 0.00010588 486.29217571684 490.299228095873 81.622 0.82059 81.622 81.195 82.016 0 177 43 6 0 0 0 0.0078194 2 43357 81.297 12.382 1 0.87305 0.71178 0 6546000 3425300 3120700 8056 1761 3067 3145 12602;12603 12603 EIILMDLVRPQDTYQFFVK 19 1 1 Oxidation (M) _EIILM(ox)DLVRPQDTYQFFVK_ EIILM(1)DLVRPQDTYQFFVK EIILM(54.29)DLVRPQDTYQFFVK 0 1 1 Q03188 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.4279 3 791.083728 2370.22935 68444.9 0.89069 0.00070461 -0.28867 -0.00022837 0.60202 0.00047625 791.417852253322 797.091102532946 124.5 0.76772 124.5 124.1 124.87 0 299 52 9 0 0 0 8.4088E-06 2 80978 54.288 54.288 1 0.78547 0.84007 0 12902000 7477000 5424800 8057 1681 3068 3146 12604;12605 12605 1495 EIILMDLVRPQDTYQFFVK 19 1 1 Oxidation (M) _EIILM(ox)DLVRPQDTYQFFVK_ EIILM(1)DLVRPQDTYQFFVK EIILM(61.69)DLVRPQDTYQFFVK 0 1 1 Q03188 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.092 3 791.083728 2370.22935 68315.63 0.96803 0.00076579 0.18355 0.00014521 1.1516 0.000911 791.418043722572 797.426034219263 123.98 0.66897 123.98 123.62 124.29 0 280 45 8 0 0 0 5.0673E-06 2 82266 61.692 61.692 1 0.78562 0.88593 0 14414000 7922600 6491600 8058 1681 3068 3146 12606;12607 12606 1495 EIINTYTEAVQTVDPFK 17 1 0 Unmodified _EIINTYTEAVQTVDPFK_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 988.5095 2 984.501663 1966.98877 NaN NaN NaN 0.98189 0.00096667 NaN NaN NaN NaN 118 0.26169 118 117.87 118.14 0 0 0 0 0.0036323 1 75614 52.576 29.34 1 NaN NaN 0 6204900 0 6204900 8059 1838 3069 3147 12608 12608 EIINTYTEAVQTVDPFK 17 1 0 Unmodified _EIINTYTEAVQTVDPFK_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.0129 2 984.501663 1966.98877 NaN NaN NaN 0.40383 0.00039757 NaN NaN NaN NaN 117.59 0.27288 117.59 117.42 117.7 0 0 0 0 6.8438E-09 1 77147 93.959 65.633 1 NaN NaN 0 4693300 0 4693300 8060 1838 3069 3147 12609 12609 EIIPGNLEDPSEFETPALSTK 21 1 0 Unmodified _EIIPGNLEDPSEFETPALSTK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1144.0702 2 1144.07064 2286.12672 56379.48 -0.18176 -0.00020794 0.87196 0.00099758 0.6902 0.00078964 1144.07127075468 1148.57948579959 114.35 0.69481 114.35 114.17 114.87 7.6294E-06 135 48 6 0 0 0 6.4787E-07 2 72518 57.328 57.328 1 0.99224 1.039 0 15158000 7357500 7800500 8061 1795 3070 3148 12610;12611 12610 EIIPGNLEDPSEFETPALSTK 21 1 0 Unmodified _EIIPGNLEDPSEFETPALSTK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1144.0726 2 1144.07064 2286.12672 56453.92 0.091846 0.00010508 -0.023028 -2.6346E-05 0.068817 7.8732E-05 1144.57210342235 1148.07753040425 113.89 0.36436 113.89 113.72 114.08 0 128 27 7 0 0 0 0.00010857 1 73918 37.013 37.013 1 1.1115 1.1123 0 15541000 6765700 8775300 8062 1795 3070 3148 12612 12612 EIIPGNLEDPSEFETPALSTK 21 1 0 Unmodified _EIIPGNLEDPSEFETPALSTK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1148.5797 2 1144.07064 2286.12672 57153.68 0.17513 0.00020036 0.16442 0.00018811 0.33955 0.00038847 1144.07105564849 1148.57909696444 125.44 0.47178 125.44 125.19 125.66 -7.6294E-06 113 16 10 0 0 0 1.16E-07 2 75239 66.285 61.302 1 2.0636 1.6082 0 12232000 4055200 8176900 8063 1795 3070 3148 12613;12614 12613 EIIPGNLEDPSEFETPALSTK 21 1 0 Unmodified _EIIPGNLEDPSEFETPALSTK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1144.5726 2 1144.07064 2286.12672 56300.05 0.29988 0.00034308 -0.5872 -0.0006718 -0.28732 -0.00032871 1144.57216853388 1148.57751398241 125.34 0.45143 125.34 125.13 125.58 0 123 18 9 0 0 0 1.2578E-08 2 74347 82.102 82.102 1 1.8607 1.4942 0 14811000 5304800 9506000 8064 1795 3070 3148 12615;12616 12616 EIIQDVTLHDLDVANAR 17 0 1 Unmodified _EIIQDVTLHDLDVANAR_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.674 3 641.337445 1920.9905 76462.98 0.95994 0.00061565 0.19536 0.00012529 1.1553 0.00074094 641.33744173771 644.673739117075 98.482 0.53848 98.482 98.251 98.79 -7.6294E-06 183 43 7 0 0 0 5.8679E-05 4 60313 50.653 45.083 1 0.89461 0.91562 0 26257000 15636000 10621000 8065 1076 3071 3149 12617;12618;12619;12620 12620 EIIQDVTLHDLDVANAR 17 0 1 Unmodified _EIIQDVTLHDLDVANAR_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.6749 3 641.337445 1920.9905 77133.08 0.4455 0.00028572 0.36225 0.00023232 0.80775 0.00051804 641.672092679423 644.673590508417 97.659 0.65546 97.659 97.337 97.993 0 242 51 7 0 0 0 1.8948E-07 2 60952 94.487 94.487 1 0.8015 0.79385 0 15568000 8495000 7073200 8066 1076 3071 3149 12621;12622 12622 EIIQDVTLHDLDVANAR 17 0 1 Unmodified _EIIQDVTLHDLDVANAR_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.6746 3 641.337445 1920.9905 77620.53 0.80826 0.00051836 0.089073 5.7126E-05 0.89733 0.00057549 641.337137379139 644.673774399469 110.75 0.4324 110.75 110.58 111.01 0 62 18 6 0 0 0 0.00058257 2 64039 37.645 31.664 1 1.0404 0.87479 0 3092500 1639200 1453300 8067 1076 3071 3149 12623;12624 12623 EIISEMGELGVLGPTIK 17 1 0 Oxidation (M) _EIISEM(ox)GELGVLGPTIK_ EIISEM(1)GELGVLGPTIK EIISEM(43.38)GELGVLGPTIK 0 1 0 K7ES74;K7EKT3;A0A1D6XXQ4;A0A1L3A5T2;A0A1L3A5U7;A0A024R7F9;Q92947 K7ES74 K7ES74 GCDH Glutaryl-CoA dehydrogenase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.494 2 901.484427 1800.9543 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.75 1 107.75 107.25 108.25 0 0 0 0 0.0078114 1 68835 43.382 34.428 1 8068 223 3072 3150 12625 12625 165 EILAELTGR 9 0 1 Unmodified _EILAELTGR_ 0 0 0 Q5JPU0;Q5JPT9;Q5JPU1;Q53GE3;A0A024RBX9;P08559;A5YPB6 Q5JPU0 Q5JPU0 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha;Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.2892 2 501.284931 1000.55531 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.318 1 80.318 79.818 80.818 0 0 0 0 0.00051514 1 48932 102.51 33.316 1 8069 349 3073 3151 12626 12626 EILETLIK 8 1 0 Unmodified _EILETLIK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.8017 2 479.794601 957.574648 96436.25 0.10498 5.0369E-05 0.27455 0.00013173 0.37953 0.0001821 479.79427756689 483.8017834066 92.647 0.6403 92.647 92.322 92.963 0 148 59 4 0 0 0 0.012693 1 56131 67.032 8.4276 1 2.9116 2.8985 0 9631100 3147400 6483700 8070 1688 3074 3152 12627 12627 EILETLIK 8 1 0 Unmodified _EILETLIK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.8015 2 479.794601 957.574648 NaN NaN NaN 0.35837 0.00017194 NaN NaN NaN NaN 91.666 0.73262 91.666 91.285 92.017 0 0 0 0 0.0088194 2 56678 79.469 10.201 1 NaN NaN 0 16176000 0 16176000 8071 1688 3074 3152 12628;12629 12628 EILFYR 6 0 1 Unmodified _EILFYR_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 420.7344 2 420.734346 839.454139 91813.16 -0.29534 -0.00012426 0.79957 0.00033641 0.50423 0.00021215 420.734682476418 425.738677835645 83.593 0.42701 83.593 83.447 83.874 0 72 26 8 0 0 0 0.057087 1 44771 80.317 21.288 1 5.1114 4.459 0 46176000 7322200 38854000 8072 1391 3075 3153 12630 12630 EILGTAQSVGCNVDGR 16 0 1 Unmodified _EILGTAQSVGCNVDGR_ 0 0 0 P30050;Q59FI9 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.4071 2 838.407043 1674.79953 64722.58 0.70312 0.0005895 -0.34047 -0.00028545 0.36265 0.00030405 838.406948082348 843.410977471642 63.659 1.2197 63.659 63.169 64.389 0 806 113 10 0 0 0 2.2354E-12 5 36755 120.84 119.69 1 0.83666 0.9898 0 308920000 166870000 142050000 8073 1532 3076 3154 12631;12632;12633;12634;12635 12634 EILGTAQSVGCNVDGR 16 0 1 Unmodified _EILGTAQSVGCNVDGR_ 0 0 0 P30050;Q59FI9 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.4074 2 838.407043 1674.79953 64716.21 0.58029 0.00048652 -0.26441 -0.00022168 0.31588 0.00026484 838.407054662266 843.411011843465 62.532 1.0389 62.532 62.184 63.223 0 716 94 11 0 0 0 1.1521E-44 3 36761 169.23 169.23 1 0.84264 0.98315 0 510850000 268970000 241880000 8074 1532 3076 3154 12636;12637;12638 12637 EILGTAQSVGCNVDGR 16 0 1 Unmodified _EILGTAQSVGCNVDGR_ 0 0 0 P30050;Q59FI9 P30050 P30050 RPL12 60S ribosomal protein L12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.4061 2 838.407043 1674.79953 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.022 1 61.022 60.522 61.522 0 0 0 0 0.00073761 1 35737 70.412 53.386 1 8075 1532 3076 3154 12639 12639 EILGTAQSVGCNVDGR 16 0 1 Unmodified _EILGTAQSVGCNVDGR_ 0 0 0 P30050;Q59FI9 P30050 P30050 RPL12 60S ribosomal protein L12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.4072 2 838.407043 1674.79953 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.215 1 63.215 62.715 63.715 0 0 0 0 0.0021476 1 37128 61.212 46.522 1 8076 1532 3076 3154 12640 12640 EILGTAQSVGCNVDGR 16 0 1 Unmodified _EILGTAQSVGCNVDGR_ 0 0 0 P30050;Q59FI9 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 843.4125 2 838.407043 1674.79953 65856.37 0.53525 0.00044876 -0.18753 -0.00015723 0.34772 0.00029153 838.407099748475 843.411129713294 73.176 1.3211 73.176 72.902 74.223 0 516 91 9 0 0 0 1.4811E-06 2 38585 95.417 89.629 1 1.0793 0.93137 0 82561000 37498000 45063000 8077 1532 3076 3154 12641;12642 12641 EILGTAQSVGCNVDGR 16 0 1 Unmodified _EILGTAQSVGCNVDGR_ 0 0 0 P30050;Q59FI9 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.4066 2 838.407043 1674.79953 65541.84 0.54732 0.00045887 -0.34117 -0.00028604 0.20615 0.00017284 838.406983588508 843.41114200345 73.8 1.3635 73.8 73.476 74.84 7.6294E-06 565 90 10 0 0 0 3.3259E-18 3 38346 136.38 136.38 1 1.1146 0.9728 0 78559000 35952000 42606000 8078 1532 3076 3154 12643;12644;12645 12644 EILLEMIHSIQNSQDMR 17 0 1 2 Oxidation (M) _EILLEM(ox)IHSIQNSQDM(ox)R_ EILLEM(1)IHSIQNSQDM(1)R EILLEM(56.85)IHSIQNSQDM(56.85)R 0 2 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.3425 3 697.006601 2087.99797 NaN NaN NaN -0.351 -0.00024465 NaN NaN NaN NaN 81.688 0.45032 81.688 81.449 81.899 0 0 0 0 0.00028298 1 49926 56.851 49.027 1 NaN NaN 0 13250000 0 13250000 8079 900 3077 3155 12646 12646 724;725 EILPFTDRK 9 1 1 Unmodified _EILPFTDRK_ 0 0 1 Q9UKN8;B3KNH2 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 373.5451 3 373.544996 1117.61316 NaN NaN NaN -0.034209 -1.2779E-05 NaN NaN NaN NaN 58.74 0.33579 58.74 58.616 58.952 0 0 0 0 0.026822 1 33316 30.569 19.356 1 NaN NaN 0 3296700 3296700 0 8080 2107 3078 3156 12647 12647 EILQNTTSLK 10 1 0 Unmodified _EILQNTTSLK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.823 2 573.821878 1145.6292 79505.12 0.27143 0.00015575 0.042834 2.4579E-05 0.31426 0.00018033 573.821714885614 577.828892554261 50.188 0.4846 50.188 50.003 50.488 3.8147E-06 169 46 5 0 0 0 0.0035929 1 27630 63.816 51.769 1 1.3518 1.496 0 57870000 23300000 34570000 8081 1412 3079 3157 12648 12648 EILQNTTSLK 10 1 0 Unmodified _EILQNTTSLK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.8218 2 573.821878 1145.6292 79449.52 0.43196 0.00024787 0.21034 0.0001207 0.6423 0.00036857 573.82174953154 577.829147093584 58.103 0.6824 58.103 57.866 58.548 3.8147E-06 222 49 6 0 0 0 0.011471 1 28823 51.949 41.141 1 1.6574 1.3416 0 4365800 1319200 3046600 8082 1412 3079 3157 12649 12649 EILSEENEMQPNGK 14 1 0 Oxidation (M) _EILSEENEM(ox)QPNGK_ EILSEENEM(1)QPNGK EILSEENEM(57.35)QPNGK 0 1 0 Q8TAF6;O60488;D6RF95;D6RFW9;D6RDA8;D6RD96 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.3782 2 817.372334 1632.73012 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.828 1 31.828 31.328 32.328 1.9073E-06 0 0 0 0.001396 1 15805 57.348 38.603 1 8083 1394 3080 3158 12650 12650 1071 EILSEVER 8 0 1 Unmodified _EILSEVER_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.7652 2 487.761289 973.508025 87970.64 -0.11989 -5.8475E-05 0.48675 0.00023742 0.36687 0.00017894 487.761334207052 492.765640577829 50.304 0.39125 50.304 50.105 50.497 0 101 37 4 0 0 0 0.031214 1 27705 51.43 4.5947 1 1.2475 1.271 0 14812000 6737200 8075300 8084 951 3081 3159 12651 12651 EILVGDVGQTVDDPYATFVK 20 1 0 Unmodified _EILVGDVGQTVDDPYATFVK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;E9PS23 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1087.5612 2 1083.55188 2165.08922 57769.42 0.25472 0.000276 0.25221 0.00027328 0.50693 0.00054928 1083.55175876316 1088.06050018014 116.79 0.51801 116.79 116.56 117.08 7.6294E-06 203 34 9 0 0 0 7.9965E-18 2 74554 121.24 121.24 1 5.073 5.7146 0 74559000 10487000 64071000 8085 1242 3082 3160 12652;12653 12652 EILVGDVGQTVDDPYATFVK 20 1 0 Unmodified _EILVGDVGQTVDDPYATFVK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;E9PS23 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1088.0621 2 1083.55188 2165.08922 58575.63 0.33287 0.00036068 0.26767 0.00029004 0.60054 0.00065072 1083.55176491338 1088.06052126039 116.37 0.77264 116.37 116.09 116.87 -7.6294E-06 204 48 9 0 0 0 2.678E-40 2 76001 151.44 139.06 1 4.8829 5.4832 0 75177000 13202000 61975000 8086 1242 3082 3160 12654;12655 12654 EILVGDVGQTVDDPYATFVK 20 1 0 Unmodified _EILVGDVGQTVDDPYATFVK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;E9PS23 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1087.5594 2 1083.55188 2165.08922 57946.97 0.62452 0.0006767 0.057504 6.2309E-05 0.68203 0.00073901 1084.0533890776 1087.55899499538 128.45 0.54807 128.45 128.21 128.76 0 125 23 10 0 0 0 1.3851E-06 2 77478 74.769 74.769 1 3.6827 2.9263 0 19189000 4005000 15184000 8087 1242 3082 3160 12656;12657 12656 EILVGDVGQTVDDPYATFVK 20 1 0 Unmodified _EILVGDVGQTVDDPYATFVK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;E9PS23 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1088.0634 2 1083.55188 2165.08922 58044.24 0.30468 0.00033014 0.065135 7.0577E-05 0.36982 0.00040072 1084.05337527877 1088.06061273405 128.25 0.53696 128.25 128.01 128.54 0 131 22 10 0 0 0 1.375E-06 2 76465 74.853 74.853 1 3.9842 3.1933 0 19601000 3657400 15944000 8088 1242 3082 3160 12658;12659 12658 EILVGDVGVTITDPFK 16 1 0 Unmodified _EILVGDVGVTITDPFK_ 0 0 0 B7Z9M9;V9HWA6;P60981;F6RFD5 B7Z9M9 B7Z9M9 HEL32;DSTN Destrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.9753 2 851.966728 1701.9189 67867.23 0.69966 0.00059609 0.048764 4.1546E-05 0.74842 0.00063763 851.966635263868 855.973514657 124.24 0.47121 124.24 124.02 124.49 7.6294E-06 117 32 7 0 0 0 1.4592E-12 3 80594 122.39 97.554 1 5.6717 5.769 0 13957000 2622100 11335000 8089 1108 3083 3161 12660;12661;12662 12661 EILVGDVGVTITDPFK 16 1 0 Unmodified _EILVGDVGVTITDPFK_ 0 0 0 B7Z9M9;V9HWA6;P60981;F6RFD5 B7Z9M9 B7Z9M9 HEL32;DSTN Destrin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.9752 2 851.966728 1701.9189 NaN NaN NaN -0.15024 -0.000128 NaN NaN NaN NaN 123.87 0.40652 123.87 123.64 124.04 0 0 0 0 1.8199E-12 1 82247 108.72 82.671 1 NaN NaN 0 14135000 0 14135000 8090 1108 3083 3161 12663 12663 EINDCIGGTVLNISK 15 1 0 Unmodified _EINDCIGGTVLNISK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.9241 2 816.916712 1631.81887 NaN NaN NaN -0.15226 -0.00012438 NaN NaN NaN NaN 94.616 0.97006 94.616 94.197 95.167 0 0 0 0 1.5447E-98 1 57376 216.68 192.83 1 NaN NaN 0 136560000 0 136560000 8091 1415 3084 3162 12664 12664 EINDCIGGTVLNISK 15 1 0 Unmodified _EINDCIGGTVLNISK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.9243 2 816.916712 1631.81887 NaN NaN NaN -0.36295 -0.0002965 NaN NaN NaN NaN 93.878 1.0157 93.878 93.467 94.483 0 0 0 0 3.4059E-69 1 58207 185.37 160.58 1 NaN NaN 0 166340000 0 166340000 8092 1415 3084 3162 12665 12665 EINDCIGGTVLNISK 15 1 0 Unmodified _EINDCIGGTVLNISK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.9176 2 816.916712 1631.81887 65386.12 0.81252 0.00066376 -1.0334 -0.00084417 -0.22084 -0.00018041 816.915728569392 820.923640603975 107.85 1.05 107.85 107.53 108.58 0 451 54 11 0 0 0 1.548E-10 2 61761 121.28 102.66 1 0.53592 0.47237 0 259310000 147860000 111450000 8093 1415 3084 3162 12666;12667 12667 EINITSALAEK 11 1 0 Unmodified _EINITSALAEK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.8267 2 594.82716 1187.63977 NaN NaN NaN -0.34705 -0.00020643 NaN NaN NaN NaN 81.877 0.36162 81.877 81.682 82.044 0 0 0 0 0.00303 1 50067 68.893 35.096 1 NaN NaN 0 14120000 14120000 0 8094 684 3085 3163 12668 12668 EINSDQATQGNISSDR 16 0 1 Unmodified _EINSDQATQGNISSDR_ 0 0 0 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.8985 2 867.898093 1733.78163 65311.93 0.61902 0.00053725 0.10204 8.856E-05 0.72106 0.00062581 867.897717881471 872.902304227096 27.156 0.26188 27.156 27.014 27.276 -1.9073E-06 50 12 7 0 0 0 1.5169E-56 2 12394 176.91 164.77 1 0.62976 0.66066 0 12096000 7061800 5034000 8095 1270 3086 3164 12669;12670 12669 EINSDQATQGNISSDR 16 0 1 Unmodified _EINSDQATQGNISSDR_ 0 0 0 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.8995 2 867.898093 1733.78163 65036.06 0.8307 0.00072096 0.48936 0.00042471 1.3201 0.0011457 867.898044714187 872.902085166369 26.752 0.25534 26.752 26.627 26.883 0 38 11 5 0 0 0 6.7789E-110 2 12133 233.37 225.64 1 0.63871 0.64028 0 18034000 9649900 8384000 8096 1270 3086 3164 12671;12672 12671 EINSDQATQGNISSDR 16 0 1 Unmodified _EINSDQATQGNISSDR_ 0 0 0 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 868.4 2 867.898093 1733.78163 65993.36 0.28007 0.00024307 0.76537 0.00066426 1.0454 0.00090734 867.898606841463 872.903029114972 31.472 0.3062 31.472 31.321 31.627 -1.9073E-06 95 19 7 0 0 0 0.025251 1 13282 26.124 21.576 1 0.75009 0.62718 0 3684000 1887200 1796800 8097 1270 3086 3164 12673 12673 EIPETTPIEEVK 12 1 0 Unmodified _EIPETTPIEEVK_ 0 0 0 Q71RC2;Q8TBL5;A0A087WTL9;Q6P4E2;Q96J85 Q71RC2 Q71RC2 LARP4 La-related protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.871 2 692.86394 1383.71333 75857.63 0.51805 0.00035893 0.3643 0.00025241 0.88235 0.00061135 692.864154271365 696.871092826709 72.743 0.78484 72.743 72.258 73.043 0 107 58 4 0 0 0 0.001238 1 42547 61.65 61.65 1 2.005 2.0682 0 14616000 4978100 9637500 8098 1868 3087 3165 12674 12674 EIPETTPIEEVK 12 1 0 Unmodified _EIPETTPIEEVK_ 0 0 0 Q71RC2;Q8TBL5;A0A087WTL9;Q6P4E2;Q96J85 Q71RC2 Q71RC2 LARP4 La-related protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.8715 2 692.86394 1383.71333 75665.94 0.40946 0.0002837 -0.21106 -0.00014624 0.1984 0.00013746 692.862857664081 696.870903096833 71.646 0.37161 71.646 71.451 71.822 0 60 28 4 0 0 0 0.00019323 2 42866 77.379 77.379 1 2.1535 2.1544 0 15463000 5974000 9489200 8099 1868 3087 3165 12675;12676 12675 EIPETTPIEEVK 12 1 0 Unmodified _EIPETTPIEEVK_ 0 0 0 Q71RC2;Q8TBL5;A0A087WTL9;Q6P4E2;Q96J85 Q71RC2 Q71RC2 LARP4 La-related protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.8729 2 692.86394 1383.71333 73171.45 0.37606 0.00026056 -0.035947 -2.4906E-05 0.34011 0.00023565 692.8625888399 697.374002757439 83.164 0.78422 83.164 82.671 83.456 0 88 46 4 0 0 0 0.023015 1 45280 37.556 37.556 1 1.8228 1.5398 0 1436600 485750 950900 8100 1868 3087 3165 12677 12677 EIPETTPIEEVK 12 1 0 Unmodified _EIPETTPIEEVK_ 0 0 0 Q71RC2;Q8TBL5;A0A087WTL9;Q6P4E2;Q96J85 Q71RC2 Q71RC2 LARP4 La-related protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.8717 2 692.86394 1383.71333 73637.46 0.57114 0.00039572 0.0053513 3.7077E-06 0.57649 0.00039943 692.862823671687 696.870464999373 83.364 0.69623 83.364 82.881 83.577 0 101 39 5 0 0 0 0.014882 1 44547 43.282 43.282 1 1.8737 1.5091 0 1938800 624560 1314200 8101 1868 3087 3165 12678 12678 EIPEVLVDPR 10 0 1 Unmodified _EIPEVLVDPR_ 0 0 0 P53350;B2R841;Q58A51;I3L387 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.8284 2 583.824421 1165.63429 NaN NaN NaN -0.26255 -0.00015328 NaN NaN NaN NaN 88.794 0.46156 88.794 88.571 89.033 0 0 0 0 0.03586 1 53464 50.473 18.538 1 NaN NaN 0 28466000 0 28466000 8102 1604 3088 3166 12679 12679 EIPEVLVDPR 10 0 1 Unmodified _EIPEVLVDPR_ 0 0 0 P53350;B2R841;Q58A51;I3L387 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.829 2 583.824421 1165.63429 78549.02 0.87247 0.00050937 -0.18357 -0.00010717 0.6889 0.0004022 583.824422882795 588.828724416372 87.759 0.48271 87.759 87.52 88.002 0 152 35 6 0 0 0 0.0084824 2 54008 56.013 41.856 1 0.89387 1.0343 0 68013000 36424000 31589000 8103 1604 3088 3166 12680;12681 12680 EIPSATQSPISK 12 1 0 Unmodified _EIPSATQSPISK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.3378 2 629.337892 1256.66123 75662.87 0.76195 0.00047952 0.01617 1.0176E-05 0.77812 0.0004897 629.337932294887 633.344941066111 46.36 0.65197 46.36 46.095 46.746 0 284 55 7 0 0 0 4.8852E-08 2 24968 114.39 82.972 1 1.0327 1.158 0 65682000 32234000 33448000 8104 1997 3089 3167 12682;12683 12682 EIPSATQSPISK 12 1 0 Unmodified _EIPSATQSPISK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3452 2 629.337892 1256.66123 76805.88 0.76904 0.00048398 -0.045998 -2.8948E-05 0.72304 0.00045504 629.337789474478 633.344906770261 45.397 0.61707 45.397 45.135 45.752 0 268 54 7 0 0 0 1.3111E-12 2 24854 129.28 101.51 1 1.0417 1.1638 0 89034000 49271000 39762000 8105 1997 3089 3167 12684;12685 12685 EIPSATQSPISK 12 1 0 Unmodified _EIPSATQSPISK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.3448 2 629.337892 1256.66123 76517.82 0.49893 0.00031399 -0.11007 -6.9272E-05 0.38886 0.00024472 629.337776804443 633.34489819813 53.361 0.74483 53.361 53.097 53.842 0 298 54 9 0 0 0 0.0064926 1 26386 49.189 32.991 1 1.1174 0.88618 0 10246000 4791200 5454500 8106 1997 3089 3167 12686 12686 EIPSATQSPISK 12 1 0 Unmodified _EIPSATQSPISK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.3455 2 629.337892 1256.66123 77168.47 0.46282 0.00029127 0.13654 8.5931E-05 0.59936 0.0003772 629.337817817253 633.344998149705 53.843 0.76157 53.843 53.509 54.271 0 291 54 9 0 0 0 0.00087998 3 26110 64.439 47.003 1 1.1682 0.95887 0 9176500 4219400 4957100 8107 1997 3089 3167 12687;12688;12689 12689 EIPSHVLSK 9 1 0 Unmodified _EIPSHVLSK_ 0 0 0 E5RHG8;A0A024R7Y5;Q15369 E5RHG8 E5RHG8 TCEB1 Transcription elongation factor B polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2957 2 505.287474 1008.5604 83155.86 0.72248 0.00036506 1.3387 0.00067642 2.0612 0.0010415 505.287677846787 509.295895648919 29.142 0.19101 29.142 29.08 29.271 0 33 11 5 0 0 0 0.015809 1 14063 54.436 11.567 1 1.9143 2.0552 0 21420000 7867500 13553000 8108 238 3090 3168 12690 12690 EIQAPASADIR 11 0 1 Unmodified _EIQAPASADIR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.8084 2 585.809302 1169.60405 76848.92 0.80981 0.00047439 -0.23941 -0.00014025 0.57039 0.00033414 585.809152099763 590.813278225232 48.786 0.85464 48.786 48.461 49.316 0 293 64 7 0 0 0 2.37E-12 2 26587 140.17 90.747 1 0.78444 0.92378 0 236780000 134850000 101930000 8109 1389 3091 3169 12691;12692 12692 EIQAPASADIR 11 0 1 Unmodified _EIQAPASADIR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.8092 2 585.809302 1169.60405 78020.71 0.49568 0.00029038 0.11064 6.4816E-05 0.60633 0.00035519 585.809327871052 590.813420034647 47.605 0.56814 47.605 47.269 47.837 0 178 39 8 0 0 0 1.8459E-05 2 26449 105.52 56.959 1 0.80241 0.9295 0 286460000 155440000 131030000 8110 1389 3091 3169 12693;12694 12694 EIQAPASADIR 11 0 1 Unmodified _EIQAPASADIR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.8093 2 585.809302 1169.60405 77747.88 0.567 0.00033215 0.037138 2.1756E-05 0.60413 0.00035391 585.809249297589 590.813339564043 56.221 1.0552 56.221 55.867 56.922 0 304 67 7 0 0 0 0.0032818 2 28180 60.102 41.124 1 1.0799 0.92259 0 38455000 18213000 20242000 8111 1389 3091 3169 12695;12696 12696 EIQAPASADIR 11 0 1 Unmodified _EIQAPASADIR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.8095 2 585.809302 1169.60405 NaN NaN NaN 0.13048 7.6437E-05 NaN NaN NaN NaN 56.693 0.71556 56.693 56.382 57.098 0 0 0 0 0.0097635 1 27893 59.426 14.265 1 NaN NaN 0 17785000 17785000 0 8112 1389 3091 3169 12697 12697 EIQELEQLLSSER 13 0 1 Unmodified _EIQELEQLLSSER_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.4117 2 787.407034 1572.79952 74221.09 1.1821 0.00093083 -0.72099 -0.00056771 0.46116 0.00036312 787.908611592933 792.410475703897 111.52 0.61194 111.52 111.18 111.79 7.6294E-06 119 43 5 0 0 0 1.3915E-23 3 70171 155.48 127.3 1 0.7331 0.74049 0 9599700 4944500 4655100 8113 1581 3092 3170 12698;12699;12700 12698 EIQELEQLLSSER 13 0 1 Unmodified _EIQELEQLLSSER_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.4033 2 787.407034 1572.79952 67715.4 0.67605 0.00053233 -0.77083 -0.00060696 -0.09478 -7.463E-05 787.405247010127 792.410860604096 110.92 0.5442 110.92 110.66 111.21 -7.6294E-06 115 40 5 0 0 0 0.00010743 2 71430 91.961 76.422 1 0.68958 0.69504 0 10579000 6197700 4381700 8114 1581 3092 3170 12701;12702 12701 EIQELEQLLSSER 13 0 1 Unmodified _EIQELEQLLSSER_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.4108 2 787.407034 1572.79952 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.04 1 111.04 110.54 111.54 7.6294E-06 0 0 0 1.1145E-10 1 71580 115.33 88.884 1 8115 1581 3092 3170 12703 12703 EIQEPDPTYEEK 12 1 0 Unmodified _EIQEPDPTYEEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.346 2 739.338286 1476.66202 70884.65 0.77153 0.00057042 -0.0034751 -2.5693E-06 0.76805 0.00056785 739.338261748329 743.345431591495 42.496 0.84074 42.496 42.11 42.951 -3.8147E-06 362 66 9 0 0 0 6.2163E-18 3 22405 143.96 112.89 1 2.4997 2.8454 0 169390000 48247000 121150000 8116 1391 3093 3171 12704;12705;12706 12704 EIQEPDPTYEEK 12 1 0 Unmodified _EIQEPDPTYEEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.8463 2 739.338286 1476.66202 70947.23 0.71315 0.00052726 0.12975 9.5932E-05 0.8429 0.00062319 739.33825494018 743.345532753421 41.774 0.73131 41.774 41.502 42.233 0 371 66 8 0 0 0 9.2691E-13 3 22344 131.82 106.26 1 2.5056 2.848 0 144210000 39314000 104890000 8117 1391 3093 3171 12707;12708;12709 12707 EIQEPDPTYEEK 12 1 0 Unmodified _EIQEPDPTYEEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.3461 2 739.338286 1476.66202 70880.83 0.58913 0.00043557 0.089444 6.613E-05 0.67858 0.0005017 739.338383172847 743.345419943215 49.52 1.1295 49.52 49.164 50.294 0 494 95 9 0 0 0 0.00012263 2 24105 94.465 72.379 1 5.7741 4.8292 0 50449000 7875700 42574000 8118 1391 3093 3171 12710;12711 12710 EIQEPDPTYEEK 12 1 0 Unmodified _EIQEPDPTYEEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 743.3458 2 739.338286 1476.66202 69802.9 0.38232 0.00028267 0.19151 0.00014159 0.57383 0.00042426 739.338424689668 743.345456896546 50.1 1.669 50.1 49.653 51.322 3.8147E-06 569 127 9 0 0 0 0.023015 1 23780 37.556 30.703 1 5.2025 4.3426 0 42409000 7460700 34948000 8119 1391 3093 3171 12712 12712 EIQQFSQGTR 10 0 1 Unmodified _EIQQFSQGTR_ 0 0 0 B4DJ73;B4DHL5;B4E228;Q6NW34;B4E1X5;B4DUV5 B4DJ73 B4DJ73 C3orf17 Uncharacterized protein C3orf17 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3035 2 597.299101 1192.58365 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.705 1 28.705 28.205 29.205 -1.9073E-06 0 0 0 0.0021458 1 13642 67.897 37.327 1 8120 977 3094 3172 12713 12713 EIQQFSQGTR 10 0 1 Unmodified _EIQQFSQGTR_ 0 0 0 B4DJ73;B4DHL5;B4E228;Q6NW34;B4E1X5;B4DUV5 B4DJ73 B4DJ73 C3orf17 Uncharacterized protein C3orf17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.3005 2 597.299101 1192.58365 88387.75 0.59473 0.00035523 -1.631 -0.00097419 -1.0363 -0.00061896 597.298236183795 602.302100271794 28.061 0.31319 28.061 27.835 28.149 0 28 18 3 0 0 0 0.0037552 1 13238 63.076 45.836 1 2.8399 2.8224 0 8542000 3094700 5447300 8121 977 3094 3172 12714 12714 EIQTAVR 7 0 1 Unmodified _EIQTAVR_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.7322 2 408.732335 815.450116 93434.73 0.079544 3.2512E-05 -0.52532 -0.00021471 -0.44577 -0.0001822 408.732162857823 413.736209174964 22.484 1.5739 22.484 22.311 23.885 -1.9073E-06 318 85 8 0 0 0 0.009599 2 8485 126.24 50.933 1 0.85535 1.0162 0 984240000 523100000 461140000 8122 34;1513 3095 3173 12715;12716 12715 EIQTAVR 7 0 1 Unmodified _EIQTAVR_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.7322 2 408.732335 815.450116 95413.34 0.28087 0.0001148 -0.20813 -8.507E-05 0.072736 2.973E-05 408.732231170075 413.736427212948 28.889 0.36343 28.889 28.684 29.048 0 54 18 4 0 0 0 0.032358 1 13798 65.672 10.886 1 0.70692 0.70866 0 16206000 8830100 7375700 8123 34;1513 3095 3173 12717 12717 EIQTAVR 7 0 1 Unmodified _EIQTAVR_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.7364 2 408.732335 815.450116 95098.99 0.049853 2.0377E-05 0.24606 0.00010057 0.29591 0.00012095 408.732454691084 413.736388259564 22.528 0.84609 22.528 22.309 23.155 0 98 36 6 0 0 0 0.032919 1 8504 64.776 20.166 1 0.8798 0.87562 0 11771000 6268700 5502400 8124 34;1513 3095 3173 12718 12718 EIQTAVR 7 0 1 Unmodified _EIQTAVR_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.7366 2 408.732335 815.450116 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.207 1 28.207 27.707 28.707 0 0 0 0 0.047831 1 13403 66.993 16.027 1 8125 34;1513 3095 3173 12719 12719 EIQTLLSHK 9 1 0 Unmodified _EIQTLLSHK_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.8134 2 534.806031 1067.59751 83675.93 0.60877 0.00032557 0.41125 0.00021994 1.02 0.00054551 534.806130365169 538.81332519374 42.031 0.69758 42.031 41.759 42.456 3.8147E-06 189 46 7 0 0 0 2.1383E-05 1 22257 117.04 77.39 1 1.0306 1.1716 0 165330000 84313000 81021000 8126 790 3096 3174 12720 12720 EIQTLLSHK 9 1 0 Unmodified _EIQTLLSHK_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.8064 2 534.806031 1067.59751 83593.09 0.28916 0.00015464 0.18885 0.000101 0.47801 0.00025564 534.806081799968 538.813126624401 47.417 0.70583 47.417 47.207 47.913 0 228 50 8 0 0 0 0.0019814 2 22973 78.334 57.632 1 1.3857 1.0763 0 14832000 5981500 8850500 8127 790 3096 3174 12721;12722 12722 EIQVQHPAAK 10 1 0 Unmodified _EIQVQHPAAK_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368;Q5SZX6;E9PRC8;Q5SZX9 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8166 2 560.809105 1119.60366 NaN NaN NaN 0.51644 0.00028962 NaN NaN NaN NaN 19.876 0.1985 19.876 19.768 19.966 0 0 0 0 0.0010111 1 6390 88.294 33.182 1 NaN NaN 0 4321600 0 4321600 8128 951 3097 3175 12723 12723 EIQVQHPAAK 10 1 0 Unmodified _EIQVQHPAAK_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368;Q5SZX6;E9PRC8;Q5SZX9 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 376.8799 3 374.208495 1119.60366 98968.96 -0.45881 -0.00017169 -0.8124 -0.00030401 -1.2712 -0.0004757 374.207656674974 376.87962562756 19.687 0.25452 19.687 19.531 19.785 0 33 12 4 0 0 0 0.009763 1 6046 34.721 34.721 1 1.28 1.2712 0 6119800 2804200 3315600 8129 951 3097 3175 12724 12724 EIQVQHPAAK 10 1 0 Unmodified _EIQVQHPAAK_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368;Q5SZX6;E9PRC8;Q5SZX9 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.9436 2 560.809105 1119.60366 81741.11 -0.011653 -6.5353E-06 -0.66972 -0.00037559 -0.68138 -0.00038212 560.809037093478 564.815747817933 19.677 0.15485 19.677 19.584 19.739 0 27 7 5 0 0 0 1.3648E-07 1 6044 122.52 90.162 1 2.0724 2.0916 0 8049300 2505100 5544200 8130 951 3097 3175 12725 12725 EIREDLPVNTSK 12 1 1 Unmodified _EIREDLPVNTSK_ 0 0 1 A0A024R9D2;Q86UE4;E5RJU9 A0A024R9D2 A0A024R9D2 MTDH Protein LYRIC MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.5842 3 467.584179 1399.73071 92937.32 -0.030574 -1.4296E-05 0.11014 5.1497E-05 0.079561 3.7202E-05 467.584250359504 473.591547641607 48.962 0.3861 48.962 48.797 49.183 0 80 28 5 0 0 0 0.05514 1 23308 23.092 20.457 1 0.44073 0.37635 0 1469300 980370 488910 8131 275 3098 3176 12726 12726 EIRPTYAGSK 10 1 1 Unmodified _EIRPTYAGSK_ 0 0 1 F5GZF0;E9PKR4;Q6IAV4;O14519;O75956 F5GZF0 F5GZF0 CDK2AP1;CDK2AP2;DOC-1R Cyclin-dependent kinase 2-associated protein;Cyclin-dependent kinase 2-associated protein 1;Cyclin-dependent kinase 2-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 374.5361 3 374.536501 1120.58767 97885.63 -0.15907 -5.9577E-05 -0.026598 -9.9618E-06 -0.18567 -6.9539E-05 374.536403784425 380.543998095024 20.331 0.26563 20.331 20.205 20.471 0 51 10 7 0 0 0 0.0018485 1 6788 47.977 33.303 1 0.64612 0.75456 0 31508000 19747000 11762000 8132 1245 3099 3177 12727 12727 EIRPTYAGSK 10 1 1 Unmodified _EIRPTYAGSK_ 0 0 1 F5GZF0;E9PKR4;Q6IAV4;O14519;O75956 F5GZF0 F5GZF0 CDK2AP1;CDK2AP2;DOC-1R Cyclin-dependent kinase 2-associated protein;Cyclin-dependent kinase 2-associated protein 1;Cyclin-dependent kinase 2-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.3009 2 561.301113 1120.58767 80058.2 0.37381 0.00020982 0.99973 0.00056115 1.3735 0.00077097 561.301834472439 570.3123502903 20.334 0.38252 20.334 20.176 20.559 0 64 15 7 0 0 0 5.5422E-16 1 6792 160.77 106.16 1 0.50903 0.61058 0 59953000 36142000 23811000 8133 1245 3099 3177 12728 12728 EIRPTYAGSK 10 1 1 Unmodified _EIRPTYAGSK_ 0 0 1 F5GZF0;E9PKR4;Q6IAV4;O14519;O75956 F5GZF0 F5GZF0 CDK2AP1;CDK2AP2;DOC-1R Cyclin-dependent kinase 2-associated protein;Cyclin-dependent kinase 2-associated protein 1;Cyclin-dependent kinase 2-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.3005 2 561.301113 1120.58767 77896.04 0.40371 0.0002266 1.7676 0.00099214 2.1713 0.0012187 561.301842427375 570.31244516841 20.203 0.41966 20.203 19.997 20.417 1.9073E-06 73 14 8 0 0 0 1.9042E-21 2 6501 164.33 107.16 1 0.7911 0.92294 0 46083000 24687000 21396000 8134 1245 3099 3177 12729;12730 12729 EIRPTYAGSK 10 1 1 Unmodified _EIRPTYAGSK_ 0 0 1 F5GZF0;E9PKR4;Q6IAV4;O14519;O75956 F5GZF0 F5GZF0 CDK2AP1;CDK2AP2;DOC-1R Cyclin-dependent kinase 2-associated protein;Cyclin-dependent kinase 2-associated protein 1;Cyclin-dependent kinase 2-associated protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 374.5367 3 374.536501 1120.58767 NaN NaN NaN 0.03535 1.324E-05 NaN NaN NaN NaN 20.205 0.33243 20.205 20.018 20.35 0 0 0 0 0.024092 1 6521 42.802 30.796 1 NaN NaN 0 15449000 15449000 0 8135 1245 3099 3177 12731 12731 EIRPTYAGSK 10 1 1 Unmodified _EIRPTYAGSK_ 0 0 1 F5GZF0;E9PKR4;Q6IAV4;O14519;O75956 F5GZF0 F5GZF0 CDK2AP1;CDK2AP2;DOC-1R Cyclin-dependent kinase 2-associated protein;Cyclin-dependent kinase 2-associated protein 1;Cyclin-dependent kinase 2-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.3055 2 561.301113 1120.58767 79299.77 0.16013 8.9881E-05 1.106 0.00062079 1.2661 0.00071067 561.301952962341 570.312350534203 21.796 0.3251 21.796 21.591 21.916 0 50 11 7 0 0 0 0.041231 1 6732 57.149 31.575 1 0.94907 0.78613 0 3887200 1966300 1920900 8136 1245 3099 3177 12732 12732 EISDGDVIISGNK 13 1 0 Unmodified _EISDGDVIISGNK_ 0 0 0 Q59FL8;Q504U8;E7BSV0;E9PFD7;F2YGG7;Q2TTR7;A9CB80;A8K2T7;P00533;B7Z2I3;A2VCQ7;Q147T7;Q68GS6;F1JTL6 Q59FL8 Q59FL8 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.851 2 673.843539 1345.67252 NaN NaN NaN 2.1107 0.0014223 NaN NaN NaN NaN 58.445 0.19605 58.445 58.329 58.525 3.8147E-06 0 0 0 0.0024253 2 34019 69.672 34.227 1 NaN NaN 0 11196000 0 11196000 8137 713 3100 3178 12733;12734 12734 EISDGDVIISGNK 13 1 0 Unmodified _EISDGDVIISGNK_ 0 0 0 Q59FL8;Q504U8;E7BSV0;E9PFD7;F2YGG7;Q2TTR7;A9CB80;A8K2T7;P00533;B7Z2I3;A2VCQ7;Q147T7;Q68GS6;F1JTL6 Q59FL8 Q59FL8 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8528 2 673.843539 1345.67252 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.529 1 58.529 58.029 59.029 -3.8147E-06 0 0 0 0.02261 1 34044 45.829 20.27 1 8138 713 3100 3178 12735 12735 EISEASENIYSDVR 14 0 1 Unmodified _EISEASENIYSDVR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.3789 2 806.378474 1610.74239 68456.45 0.54434 0.00043894 0.12441 0.00010032 0.66875 0.00053926 806.378382663817 811.382646580857 66.9 0.67073 66.9 66.607 67.278 0 259 49 8 0 0 0 6.2746E-38 2 38600 171.92 171.92 1 1.2022 1.2854 0 45019000 21197000 23822000 8139 1945 3101 3179 12736;12737 12736 EISEASENIYSDVR 14 0 1 Unmodified _EISEASENIYSDVR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.3788 2 806.378474 1610.74239 68222.15 0.26574 0.00021429 0.51555 0.00041573 0.78129 0.00063002 806.378688808042 811.382962346373 65.872 0.6824 65.872 65.54 66.223 0 313 58 8 0 0 0 5.7545E-99 1 38868 237.68 212.06 1 1.224 1.4097 0 54091000 23584000 30506000 8140 1945 3101 3179 12738 12738 EISEASENIYSDVR 14 0 1 Unmodified _EISEASENIYSDVR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.3825 2 806.378474 1610.74239 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.264 1 66.264 65.764 66.764 0 0 0 0 0.014886 1 39147 47.559 26.689 1 8141 1945 3101 3179 12739 12739 EISEASENIYSDVR 14 0 1 Unmodified _EISEASENIYSDVR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.3827 2 806.378474 1610.74239 67722.32 0.42628 0.00034375 0.38635 0.00031154 0.81263 0.00065529 806.378652683513 811.382844433518 77.13 0.95175 77.13 76.793 77.744 0 351 64 9 0 0 0 3.133E-06 2 41122 103.43 103.43 1 1.8484 1.558 0 28350000 9857000 18493000 8142 1945 3101 3179 12740;12741 12740 EISEASENIYSDVR 14 0 1 Unmodified _EISEASENIYSDVR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.3788 2 806.378474 1610.74239 67892.3 0.57248 0.00046163 0.18074 0.00014575 0.75322 0.00060738 806.37860736392 811.382752447249 77.608 1.1507 77.608 77.226 78.376 0 373 75 9 0 0 0 2.3531E-09 2 40604 116.74 116.74 1 1.8325 1.5895 0 23902000 8722000 15180000 8143 1945 3101 3179 12742;12743 12742 EISEGDEVEVYSR 13 0 1 Unmodified _EISEGDEVEVYSR_ 0 0 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;C9JAJ4 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.8499 2 756.346642 1510.67873 70496.03 0.74175 0.00056102 1.3953 0.0010553 2.137 0.0016163 756.347758413767 761.35220547548 56.067 0.94911 56.067 55.537 56.486 0 329 75 6 0 0 0 5.607E-05 1 31446 96.229 88.83 1 0.82419 0.85024 0 36926000 19066000 17860000 8144 531 3102 3180 12744 12744 EISEGDEVEVYSR 13 0 1 Unmodified _EISEGDEVEVYSR_ 0 0 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;C9JAJ4 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.3478 2 756.346642 1510.67873 NaN NaN NaN 0.81939 0.00061974 NaN NaN NaN NaN 55.198 0.63794 55.198 54.925 55.563 3.8147E-06 0 0 0 8.8873E-14 1 31535 119.27 104.98 1 NaN NaN 0 34088000 34088000 0 8145 531 3102 3180 12745 12745 EISEGDEVEVYSR 13 0 1 Unmodified _EISEGDEVEVYSR_ 0 0 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;C9JAJ4 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 761.3516 2 756.346642 1510.67873 NaN NaN NaN -0.13515 -0.00010222 NaN NaN NaN NaN 65.576 0.66357 65.576 65.217 65.88 0 0 0 0 0.00062117 1 33805 80.979 58.239 1 NaN NaN 0 6025000 0 6025000 8146 531 3102 3180 12746 12746 EISEGDEVEVYSR 13 0 1 Unmodified _EISEGDEVEVYSR_ 0 0 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;C9JAJ4 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.8536 2 756.346642 1510.67873 NaN NaN NaN 0.018436 1.3944E-05 NaN NaN NaN NaN 66.254 0.89259 66.254 65.888 66.78 7.6294E-06 0 0 0 0.0070158 1 33448 54.7 39.128 1 NaN NaN 0 5525600 0 5525600 8147 531 3102 3180 12747 12747 EISESTPVEEVEALFK 16 1 0 Unmodified _EISESTPVEEVEALFK_ 0 0 0 Q92615 Q92615 Q92615 LARP4B La-related protein 4B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.9639 2 903.954014 1805.89348 NaN NaN NaN 2.5383 0.0022945 NaN NaN NaN NaN 128.94 0.13663 128.94 128.88 129.02 0 0 0 0 2.0001E-18 1 84097 124.38 99.681 1 NaN NaN 0 9055100 0 9055100 8148 1949 3103 3181 12748 12748 EISFAYEVLSNPEK 14 1 0 Unmodified _EISFAYEVLSNPEK_ 0 0 0 A0A024R6S1;O60884;T2DN57;T2DPK5 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.415 2 813.406503 1624.79845 65917.78 0.76788 0.0006246 1.0039 0.00081655 1.7717 0.0014412 813.909430877958 817.414852265466 105.31 0.8774 105.31 105.07 105.95 0 194 62 6 0 0 0 9.3689E-05 2 66863 86.313 68.448 1 1.5233 1.6861 0 45607000 18140000 27467000 8149 208 3104 3182 12749;12750 12749 EISFAYEVLSNPEK 14 1 0 Unmodified _EISFAYEVLSNPEK_ 0 0 0 A0A024R6S1;O60884;T2DN57;T2DPK5 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 813.9048 2 813.406503 1624.79845 67165.32 0.65337 0.00053145 0.22475 0.00018281 0.87812 0.00071426 813.406619014437 817.414875062533 117.38 0.63056 117.38 117.16 117.79 0 132 28 8 0 0 0 0.00061476 3 69096 59.57 44.597 1 0.85958 0.68315 0 6576800 3906800 2670000 8150 208 3104 3182 12751;12752;12753 12752 EISGLWNELDSLK 13 1 0 Unmodified _EISGLWNELDSLK_ 0 0 0 A0A024R663;Q86UP2;G3V4Y7;B7Z6P3;H0YJV5 A0A024R663 A0A024R663 KTN1 Kinectin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.3891 2 752.388113 1502.76167 NaN NaN NaN 0.22492 0.00016923 NaN NaN NaN NaN 130.97 0.40616 130.97 130.8 131.2 0 0 0 0 0.010127 1 79446 53.08 35.216 1 NaN NaN 0 2175600 2175600 0 8151 197 3105 3183 12754 12754 EISGLWNELDSLK 13 1 0 Unmodified _EISGLWNELDSLK_ 0 0 0 A0A024R663;Q86UP2;G3V4Y7;B7Z6P3;H0YJV5 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 752.3896 2 752.388113 1502.76167 68945.5 0.8661 0.00065165 0.014814 1.1146E-05 0.88092 0.00066279 752.387817015315 756.897104772314 130.76 0.34171 130.76 130.66 131 0 60 15 7 0 0 0 0.0029083 1 78344 51.841 36.869 1 0.51583 0.42214 0 5475900 3366500 2109500 8152 197 3105 3183 12755 12755 EISHVLNFLIR 11 0 1 Unmodified _EISHVLNFLIR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.3945 2 670.887887 1339.76122 75977.69 0.73976 0.0004963 0.68844 0.00046186 1.4282 0.00095816 670.888499928316 675.89233967384 109.52 0.81708 109.52 109.2 110.01 0 151 60 4 0 0 0 0.026114 1 68521 40.882 36.546 1 0.8542 0.87121 0 14747000 7567700 7179300 8153 1936 3106 3184 12756 12756 EISHVLNFLIR 11 0 1 Unmodified _EISHVLNFLIR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.9288 3 447.59435 1339.76122 NaN NaN NaN 0.027767 1.2428E-05 NaN NaN NaN NaN 109.41 1.1921 109.41 108.8 109.99 7.6294E-06 0 0 0 0.037651 1 68166 34.755 20.946 1 NaN NaN 0 11790000 11790000 0 8154 1936 3106 3184 12757 12757 EISHVLNFLIR 11 0 1 Unmodified _EISHVLNFLIR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.9299 3 447.59435 1339.76122 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.03 1 109.03 108.53 109.53 0 0 0 0 0.023388 1 68189 61.353 50.253 1 8155 1936 3106 3184 12758 12758 EISHVLNFLIR 11 0 1 Unmodified _EISHVLNFLIR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.9306 3 447.59435 1339.76122 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.8 1 109.8 109.3 110.3 0 0 0 0 0.0088928 1 68819 67.334 51.196 1 8156 1936 3106 3184 12759 12759 EISHVLNFLIR 11 0 1 Unmodified _EISHVLNFLIR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.5941 3 447.59435 1339.76122 89473.29 0.21686 9.7065E-05 -0.20755 -9.2899E-05 0.0093071 4.1658E-06 447.594279498453 450.93028833273 108.09 1.036 108.09 107.53 108.57 0 365 73 6 0 0 0 0.0026301 2 68711 40.715 29.502 1 0.88087 0.96348 0 34506000 20553000 13953000 8157 1936 3106 3184 12760;12761 12760 EISHVLNFLIR 11 0 1 Unmodified _EISHVLNFLIR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8896 2 670.887887 1339.76122 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.09 1 108.09 107.59 108.59 7.6294E-06 0 0 0 0.02371 1 69108 64.841 44.003 1 8158 1936 3106 3184 12762 12762 EISHVLNFLIR 11 0 1 Unmodified _EISHVLNFLIR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 450.9302 3 447.59435 1339.76122 89212.94 0.28381 0.00012703 -0.10816 -4.8412E-05 0.17565 7.8618E-05 447.594297745587 450.930339619126 118.57 0.77655 118.57 118.31 119.09 0 155 37 8 0 0 0 0.0028876 2 69943 39.918 24.379 1 1.0064 0.84053 0 23601000 10882000 12719000 8159 1936 3106 3184 12763;12764 12763 EISHVLNFLIR 11 0 1 Unmodified _EISHVLNFLIR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.8928 2 670.887887 1339.76122 75468.73 0.76535 0.00051347 0.37506 0.00025162 1.1404 0.00076509 670.888010280353 675.892250944568 118.57 0.56575 118.57 118.31 118.88 -7.6294E-06 121 27 8 0 0 0 0.00032567 2 70062 87.308 73.954 1 1.1888 0.97094 0 14238000 6769400 7468700 8160 1936 3106 3184 12765;12766 12766 EISHVLNFLIR 11 0 1 Unmodified _EISHVLNFLIR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 447.5942 3 447.59435 1339.76122 90828.38 0.16622 7.4401E-05 -0.065171 -2.917E-05 0.10105 4.523E-05 447.594303473358 450.930369480925 118.2 0.72044 118.2 117.98 118.7 0 158 34 8 0 0 0 0.013737 1 68836 25.474 9.9343 1 1.111 0.89643 0 11298000 5723200 5574800 8161 1936 3106 3184 12767 12767 EITALAPSTMK 11 1 0 Oxidation (M) _EITALAPSTM(ox)K_ EITALAPSTM(1)K EITALAPSTM(118.71)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;PS1TP5BP1;ACTB;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.3107 2 589.310289 1176.60602 76935.76 0.69093 0.00040717 -0.63455 -0.00037395 0.056377 3.3223E-05 589.310556679131 593.317260261902 47.719 1.6738 47.719 47.184 48.857 0 904 139 14 0 0 0 2.0388E-08 4 25719 118.71 79.749 1 2.7517 3.3592 0 3187000000 873000000 2314000000 8162 1624;1656;1100 3107 3185 12768;12769;12770;12771 12769 840 EITALAPSTMK 11 1 0 Oxidation (M) _EITALAPSTM(ox)K_ EITALAPSTM(1)K EITALAPSTM(114.97)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;PS1TP5BP1;ACTB;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3181 2 589.310289 1176.60602 78465.21 0.81618 0.00048099 -0.57695 -0.00034 0.23924 0.00014099 589.310713490465 593.317388203915 46.603 2.0284 46.603 46.109 48.138 0 836 155 11 0 0 0 3.1726E-08 2 25827 114.97 73.939 1 2.8868 3.4228 0 3705900000 925900000 2779900000 8163 1624;1656;1100 3107 3185 12772;12773 12773 840 EITALAPSTMK 11 1 0 Oxidation (M) _EITALAPSTM(ox)K_ EITALAPSTM(1)K EITALAPSTM(61.65)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;PS1TP5BP1;ACTB;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.3108 2 589.310289 1176.60602 76408.73 0.5903 0.00034787 -0.4721 -0.00027822 0.11819 6.9653E-05 589.310222757119 593.317168696615 54.492 2.0146 54.492 53.992 56.006 0 817 139 12 0 0 0 0.0011744 3 26990 61.65 30.576 1 1.9778 1.7052 0 98958000 32746000 66212000 8164 1624;1656;1100 3107 3185 12774;12775;12776 12775 840 EITALAPSTMK 11 1 0 Oxidation (M) _EITALAPSTM(ox)K_ EITALAPSTM(1)K EITALAPSTM(60.05)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;PS1TP5BP1;ACTB;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.3104 2 589.310289 1176.60602 NaN NaN NaN 1.2411 0.00073136 NaN NaN NaN NaN 75.958 0.67599 75.958 75.646 76.322 0 0 0 0 0.0028883 1 40376 60.045 29.698 1 NaN NaN 0 5025500 5025500 0 8165 1624;1656;1100 3107 3185 12777 12777 840 EITALAPSTMK 11 1 0 Oxidation (M) _EITALAPSTM(ox)K_ EITALAPSTM(1)K EITALAPSTM(76.23)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;PS1TP5BP1;ACTB;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.3173 2 589.310289 1176.60602 75913.93 0.43799 0.00025811 -0.40472 -0.0002385 0.03327 1.9606E-05 589.310300037549 593.317181157642 54.943 2.1601 54.943 54.383 56.543 -3.8147E-06 778 144 9 0 0 0 0.0002262 3 27056 76.228 44.293 1 1.9505 1.6621 0 90117000 30061000 60055000 8166 1624;1656;1100 3107 3185 12778;12779;12780 12780 840 EITALAPSTMK 11 1 0 Oxidation (M) _EITALAPSTM(ox)K_ EITALAPSTM(1)K EITALAPSTM(94.41)K 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;PS1TP5BP1;ACTB;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.3179 2 589.310289 1176.60602 77248.95 0.41329 0.00024356 0.757 0.00044611 1.1703 0.00068967 589.311000811953 593.318011099087 76.285 1.2688 76.285 75.738 77.007 -7.6294E-06 252 87 6 0 0 0 7.893E-05 2 39869 94.409 63.335 1 2.8576 2.2963 0 16468000 4173200 12295000 8167 1624;1656;1100 3107 3185 12781;12782 12782 840 EITALAPSTMK 11 1 0 Unmodified _EITALAPSTMK_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;PS1TP5BP1;ACTB;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.3204 2 581.312832 1160.61111 78490.65 0.51017 0.00029657 0.56167 0.0003265 1.0718 0.00062307 581.313219900017 585.320292845884 75.972 1.536 75.972 75.588 77.124 0 439 104 9 0 0 0 0.0004486 2 40390 77.662 55.812 1 2.9365 2.5072 0 65663000 17520000 48144000 8168 1624;1656;1100 3107 3186 12783;12784 12784 EITALAPSTMK 11 1 0 Unmodified _EITALAPSTMK_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;Q9UE89;P63261;B4E3A4;B4DVQ0 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;PS1TP5BP1;ACTB;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.3203 2 581.312832 1160.61111 79141.51 0.33282 0.00019347 0.45826 0.00026639 0.79109 0.00045987 581.313189513742 585.320249851292 76.235 1.5791 76.235 75.867 77.446 0 469 106 10 0 0 0 0.0004027 3 39732 81.263 55.704 1 2.7882 2.3602 0 60074000 16348000 43726000 8169 1624;1656;1100 3107 3186 12785;12786;12787 12786 EITCDNFDETVK 12 1 0 Unmodified _EITCDNFDETVK_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8315 2 735.824489 1469.63442 73305.4 0.51511 0.00037903 -0.33724 -0.00024815 0.17786 0.00013088 735.824542711656 739.83141303805 56.39 0.3061 56.39 56.193 56.499 -3.8147E-06 79 21 6 0 0 0 0.00021804 2 32384 82.417 78.118 1 0.94191 0.94822 0 16112000 6571500 9540100 8170 684 3108 3187 12788;12789 12788 EITCDNFDETVK 12 1 0 Unmodified _EITCDNFDETVK_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.8235 2 735.824489 1469.63442 71185.63 0.56275 0.00041408 0.11907 8.7618E-05 0.68182 0.0005017 736.326140963336 739.831802182696 67.351 0.58211 67.351 67.132 67.714 0 143 34 6 0 0 0 0.047804 1 34292 32.999 32.691 1 1.3028 1.0352 0 3120700 1315600 1805100 8171 684 3108 3187 12790 12790 EITDIAAAAESLQPK 15 1 0 Unmodified _EITDIAAAAESLQPK_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;G1UI29;A0A087X0E3 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.1105 2 778.911953 1555.80935 71949.95 0.85506 0.00066602 0.20819 0.00016216 1.0633 0.00082818 778.910822470509 783.420905139329 104.36 0.34359 104.36 104.13 104.48 0 59 27 5 0 0 0 0.044423 1 64549 38.58 38.58 1 0.51488 0.51959 0 4840000 3330500 1509500 8172 476 3109 3188 12791 12791 EITDIAAAAESLQPK 15 1 0 Unmodified _EITDIAAAAESLQPK_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;G1UI29;A0A087X0E3 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 782.9194 2 778.911953 1555.80935 71159.12 0.97298 0.00075786 0.26832 0.000209 1.2413 0.00096686 778.911578205448 782.919330232446 116 0.38985 116 115.82 116.21 0 47 15 5 0 0 0 0.027419 1 68089 28.379 28.379 1 0.97015 0.7878 0 2710500 1352000 1358500 8173 476 3109 3188 12792 12792 EITDIAAAAESLQPK 15 1 0 Unmodified _EITDIAAAAESLQPK_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;G1UI29;A0A087X0E3 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 782.9202 2 778.911953 1555.80935 79687.07 0.86134 0.00067091 0.33447 0.00026053 1.1958 0.00093143 779.414008525818 782.919075090779 115.88 0.31657 115.88 115.74 116.06 0 46 15 5 0 0 0 0.0048644 1 67038 38.021 38.021 1 1.654 1.2919 0 2101600 502540 1599100 8174 476 3109 3188 12793 12793 EITEGDEVEVYSR 13 0 1 Unmodified _EITEGDEVEVYSR_ 0 0 0 P51116;I3L1Z2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.3636 2 763.354468 1524.69438 68771.9 0.52579 0.00040136 -0.38597 -0.00029464 0.13981 0.00010673 763.354051839875 768.358527111556 58.874 0.64655 58.874 58.571 59.218 0 251 52 6 0 0 0 0.00025005 2 33380 68.069 68.069 1 1.2348 1.2632 0 32139000 15412000 16726000 8175 1593 3110 3189 12794;12795 12794 EITEGDEVEVYSR 13 0 1 Unmodified _EITEGDEVEVYSR_ 0 0 0 P51116;I3L1Z2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.3594 2 763.354468 1524.69438 68838.55 0.55179 0.00042121 -0.4968 -0.00037923 0.05499 4.1977E-05 763.354313145308 768.358225092122 58.012 0.59226 58.012 57.696 58.288 0 224 46 6 0 0 0 6.8805E-09 2 33519 118.28 118.28 1 1.2088 1.2934 0 25003000 10176000 14827000 8176 1593 3110 3189 12796;12797 12796 EITEGDEVEVYSR 13 0 1 Unmodified _EITEGDEVEVYSR_ 0 0 0 P51116;I3L1Z2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 768.3592 2 763.354468 1524.69438 68857.38 0.51736 0.00039493 -0.23013 -0.00017567 0.28723 0.00021926 763.354378193527 768.358645542927 68.654 0.73494 68.654 68.327 69.062 0 260 54 6 0 0 0 7.6128E-06 2 35892 103.08 103.08 1 1.4237 1.2167 0 5808200 2411000 3397300 8177 1593 3110 3189 12798;12799 12799 EITEGDEVEVYSR 13 0 1 Unmodified _EITEGDEVEVYSR_ 0 0 0 P51116;I3L1Z2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.3548 2 763.354468 1524.69438 68815.18 0.69564 0.00053102 -0.4508 -0.00034412 0.24484 0.0001869 763.354002349869 768.358385341886 69.384 0.77442 69.384 68.958 69.733 0 213 53 6 0 0 0 0.0035575 2 35497 49.448 49.448 1 1.336 1.1095 0 5884000 2892300 2991700 8178 1593 3110 3189 12800;12801 12801 EITGSSLIQK 10 1 0 Unmodified _EITGSSLIQK_ 0 0 0 Q86XI2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.3102 2 538.303321 1074.59209 NaN NaN NaN -0.32057 -0.00017257 NaN NaN NaN NaN 51.101 0.64367 51.101 50.712 51.356 0 0 0 0 0.0020855 1 28134 82.426 67.759 1 NaN NaN 0 21695000 0 21695000 8179 1887 3111 3190 12802 12802 EITGSSLIQK 10 1 0 Unmodified _EITGSSLIQK_ 0 0 0 Q86XI2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.3047 2 538.303321 1074.59209 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.187 1 51.187 50.687 51.687 0 0 0 0 0.018565 1 28312 54.436 27.299 1 8180 1887 3111 3190 12803 12803 EITGSSLIQK 10 1 0 Unmodified _EITGSSLIQK_ 0 0 0 Q86XI2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.304 2 538.303321 1074.59209 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.705 1 49.705 49.205 50.205 0 0 0 0 0.00047569 1 28005 72.23 30.578 1 8181 1887 3111 3190 12804 12804 EITGSSLIQK 10 1 0 Unmodified _EITGSSLIQK_ 0 0 0 Q86XI2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.3102 2 538.303321 1074.59209 NaN NaN NaN -0.19321 -0.00010401 NaN NaN NaN NaN 58.72 0.55767 58.72 58.353 58.911 -3.8147E-06 0 0 0 0.026708 1 29834 52.867 52.867 1 NaN NaN 0 2862800 0 2862800 8182 1887 3111 3190 12805 12805 EITTFEGCK 9 1 0 Unmodified _EITTFEGCK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;C9JE21;C9JAA9;A0A0S2Z5E5 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.7528 2 542.752607 1083.49066 80556.49 0.329 0.00017857 0.48167 0.00026143 0.81068 0.00044 542.752556495164 546.759960288559 37.987 0.69605 37.987 37.549 38.245 0 206 53 6 0 0 0 0.0073059 1 19832 62.107 53.838 1 1.4878 1.6685 0 54911000 23045000 31866000 8183 214 3112 3191 12806 12806 EITTFEGCK 9 1 0 Unmodified _EITTFEGCK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;C9JE21;C9JAA9;A0A0S2Z5E5 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.7602 2 542.752607 1083.49066 82438.6 0.60506 0.0003284 -0.24595 -0.00013349 0.35911 0.00019491 542.752384127621 546.759731010276 44.264 0.8779 44.264 43.691 44.569 0 201 57 6 0 0 0 0.049868 1 20482 38.086 37.208 1 1.2372 0.98145 0 3144100 1367200 1776900 8184 214 3112 3191 12807 12807 EIVHIQAGQCGNQIGTK 17 1 0 Unmodified _EIVHIQAGQCGNQIGTK_ 0 0 0 Q9BUF5;B4DP54;K7ESM5;K7EL29;K7ESQ3;K7EQT3;K7EJ64;K7ERA8;K7EJZ4;K7EN98;K7EPE5 Q9BUF5 Q9BUF5 TUBB6 Tubulin beta-6 chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.323 3 618.315987 1851.92613 NaN NaN NaN 0.52099 0.00032214 NaN NaN NaN NaN 47.403 0.29257 47.403 47.248 47.54 0 0 0 0 0.013393 1 25748 33.343 23.813 1 NaN NaN 0 10327000 0 10327000 8185 2004 3113 3192 12808 12808 EIVHLQAGQCGNQIGAK 17 1 0 Unmodified _EIVHLQAGQCGNQIGAK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B4DFH6;M0R2D3;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;M0R2T4;M0R042;M0QYM7;P04350;B4DJ43;M0R278 Q8IZ29;M0R042;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.6473 3 608.312465 1821.91557 75327.88 0.52162 0.00031731 -0.46578 -0.00028334 0.055837 3.3966E-05 608.646628834338 610.983676030495 47.722 0.63193 47.722 47.475 48.107 0 373 55 11 0 0 0 6.4165E-06 2 25823 83.54 0 1 1.5201 1.8096 0 629630000 236650000 392980000 8186 1660;1441;1353 3114 3193 12809;12810 12810 EIVHLQAGQCGNQIGAK 17 1 0 Unmodified _EIVHLQAGQCGNQIGAK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B4DFH6;M0R2D3;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;M0R2T4;M0R042;M0QYM7;P04350;B4DJ43;M0R278 Q8IZ29;M0R042;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 911.9656 2 911.965059 1821.91557 62315.07 0.34824 0.00031758 -0.15432 -0.00014073 0.19392 0.00017685 911.965080330633 915.972304801319 47.719 0.25882 47.719 47.56 47.819 0 125 22 8 0 0 0 6.3514E-18 2 25939 143.42 0 1 1.4554 1.6494 0 97538000 35619000 61920000 8187 1660;1441;1353 3114 3193 12811;12812 12812 EIVHLQAGQCGNQIGAK 17 1 0 Unmodified _EIVHLQAGQCGNQIGAK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B4DFH6;M0R2D3;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;M0R2T4;M0R042;M0QYM7;P04350;B4DJ43;M0R278 Q8IZ29;M0R042;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.6471 3 608.312465 1821.91557 75399.88 0.6712 0.0004083 -0.10027 -6.0995E-05 0.57093 0.0003473 608.312627566815 610.983880483919 46.384 0.56274 46.384 46.023 46.585 0 376 42 12 0 0 0 6.1036E-13 2 25491 112.96 0 1 1.4037 1.6535 0 531880000 232580000 299300000 8188 1660;1441;1353 3114 3193 12813;12814 12814 EIVHLQAGQCGNQIGAK 17 1 0 Unmodified _EIVHLQAGQCGNQIGAK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B4DFH6;M0R2D3;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;M0R2T4;M0R042;M0QYM7;P04350;B4DJ43;M0R278 Q8IZ29;M0R042;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 912.467 2 911.965059 1821.91557 63271.7 0.75126 0.00068512 -0.10144 -9.251E-05 0.64982 0.00059261 912.466220424275 915.972195430192 46.388 0.58709 46.388 46.086 46.674 0 176 44 7 0 0 0 4.1918E-25 2 25457 166.7 0 1 1.4327 1.6063 0 79285000 38351000 40934000 8189 1660;1441;1353 3114 3193 12815;12816 12815 EIVHLQAGQCGNQIGAK 17 1 0 Unmodified _EIVHLQAGQCGNQIGAK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B4DFH6;M0R2D3;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;M0R2T4;M0R042;M0QYM7;P04350;B4DJ43;M0R278 Q8IZ29;M0R042;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.9835 3 608.312465 1821.91557 NaN NaN NaN -0.55272 -0.00033622 NaN NaN NaN NaN 55.182 0.5558 55.182 54.887 55.442 0 0 0 0 0.0020929 1 27724 47.64 0 1 NaN NaN 0 15389000 0 15389000 8190 1660;1441;1353 3114 3193 12817 12817 EIVHLQAGQCGNQIGAK 17 1 0 Unmodified _EIVHLQAGQCGNQIGAK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B4DFH6;M0R2D3;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;M0R2T4;M0R042;M0QYM7;P04350;B4DJ43;M0R278 Q8IZ29;M0R042;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 915.9731 2 911.965059 1821.91557 NaN NaN NaN -1.0485 -0.00095622 NaN NaN NaN NaN 55.598 0.45791 55.598 55.378 55.836 0 0 0 0 0.035834 1 27257 35.677 0 1 NaN NaN 0 1558600 0 1558600 8191 1660;1441;1353 3114 3193 12818 12818 EIVHLQAGQCGNQIGAK 17 1 0 Unmodified _EIVHLQAGQCGNQIGAK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B4DFH6;M0R2D3;M0QY85;M0QZL7;B4DNW1;M0R0X0;M0QY37;M0QX14;M0R2T4;M0R042;M0QYM7;P04350;B4DJ43;M0R278 Q8IZ29;M0R042;P04350 Q8IZ29 TUBB2C;TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.9838 3 608.312465 1821.91557 NaN NaN NaN -0.38418 -0.0002337 NaN NaN NaN NaN 55.595 0.60793 55.595 55.318 55.926 0 0 0 0 1.2102E-07 1 27295 89.506 0 1 NaN NaN 0 13730000 0 13730000 8192 1660;1441;1353 3114 3193 12819 12819 EIVHTFK 7 1 0 Unmodified _EIVHTFK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 437.245 2 437.245078 872.475603 91142.11 -0.19495 -8.5241E-05 -0.054019 -2.362E-05 -0.24897 -0.00010886 437.24483758879 441.252043930326 26.635 0.50721 26.635 26.403 26.91 0 140 31 8 0 0 0 0.0037696 2 11990 134.06 80.871 1 0.95455 1.0757 0 126620000 62104000 64520000 8193 486 3115 3194 12820;12821 12821 EIVHTFK 7 1 0 Unmodified _EIVHTFK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.2455 2 437.245078 872.475603 91070.88 0.37821 0.00016537 -0.25823 -0.00011291 0.11998 5.2459E-05 437.244875540603 441.25203558364 25.959 0.53117 25.959 25.702 26.234 1.9073E-06 157 31 8 0 0 0 0.020495 2 11420 94.006 47.24 1 0.95571 1.1074 0 213220000 112790000 100430000 8194 486 3115 3194 12822;12823 12823 EIVHTFK 7 1 0 Unmodified _EIVHTFK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 441.2517 2 437.245078 872.475603 91436.34 -0.21898 -9.5746E-05 -0.4913 -0.00021482 -0.71027 -0.00031056 437.244741099005 441.251819658663 29.08 0.85544 29.08 28.665 29.521 -1.9073E-06 350 65 7 0 0 0 0.032356 2 11780 65.676 31.823 1 1.2836 1.0119 0 10875000 4700000 6175000 8195 486 3115 3194 12824;12825 12825 EIVHTFK 7 1 0 Unmodified _EIVHTFK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 441.2522 2 437.245078 872.475603 90735.73 -0.3383 -0.00014792 0.19928 8.7136E-05 -0.13901 -6.0783E-05 437.245056631755 441.252148066549 28.939 0.77634 28.939 28.76 29.536 0 197 45 8 0 0 0 0.037563 2 11167 60.788 35.789 1 1.2298 0.98891 0 22547000 9632200 12915000 8196 486 3115 3194 12826;12827 12827 EIVLADVIDNDSWR 14 0 1 Unmodified _EIVLADVIDNDSWR_ 0 0 0 E9PBS1;A0A024RD93;P22234;D6RF62;B4DGX3 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.9157 2 822.915027 1643.8155 67696.25 0.92387 0.00076027 0.10406 8.5634E-05 1.0279 0.0008459 823.417194690081 827.918856462952 118.2 0.6895 118.2 117.94 118.63 7.6294E-06 109 40 5 0 0 0 4.5167E-05 4 75759 110.86 93.048 1 0.93967 0.98138 0 10609000 4878800 5730100 8197 380 3116 3195 12828;12829;12830;12831 12830 EIVLADVIDNDSWR 14 0 1 Unmodified _EIVLADVIDNDSWR_ 0 0 0 E9PBS1;A0A024RD93;P22234;D6RF62;B4DGX3 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.9195 2 822.915027 1643.8155 68090.13 1.1797 0.00097081 -0.06484 -5.3358E-05 1.1149 0.00091745 822.914935352845 827.918411247328 117.76 0.52071 117.76 117.53 118.05 7.6294E-06 123 35 6 0 0 0 3.3219E-10 3 77320 135.66 120.12 1 0.81008 0.81344 0 9230500 3865800 5364800 8198 380 3116 3195 12832;12833;12834 12834 EIVLADVIDNDSWR 14 0 1 Unmodified _EIVLADVIDNDSWR_ 0 0 0 E9PBS1;A0A024RD93;P22234;D6RF62;B4DGX3 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 828.4233 2 822.915027 1643.8155 69209.54 0.85718 0.00070539 0.17818 0.00014663 1.0354 0.00085202 823.416883477907 828.421040437827 130.09 0.38599 130.09 129.79 130.18 0 56 18 4 0 0 0 0.0051232 1 78740 44.299 38.067 1 1.0156 0.8994 0 1221500 555860 665660 8199 380 3116 3195 12835 12835 EIVNNIR 7 0 1 Unmodified _EIVNNIR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.2495 2 429.245609 856.476666 NaN NaN NaN -0.92882 -0.00039869 NaN NaN NaN NaN 30.924 1.2463 30.924 30.771 32.017 0 0 0 0 0.023129 1 15138 95.957 10.651 1 NaN NaN 0 365770000 0 365770000 8200 1471 3117 3196 12836 12836 EIVNNIR 7 0 1 Unmodified _EIVNNIR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 429.2458 2 429.245609 856.476666 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.846 1 30.846 30.346 31.346 -1.9073E-06 0 0 0 0.017737 1 15140 106.29 11.617 1 8201 1471 3117 3196 12837 12837 EIVNNIR 7 0 1 Unmodified _EIVNNIR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.2495 2 429.245609 856.476666 NaN NaN NaN -1.3078 -0.00056137 NaN NaN NaN NaN 30.335 1.2854 30.335 30.177 31.462 0 0 0 0 0.013902 1 14796 106.29 11.617 1 NaN NaN 0 409020000 0 409020000 8202 1471 3117 3196 12838 12838 EIVNNIR 7 0 1 Unmodified _EIVNNIR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 429.2459 2 429.245609 856.476666 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.273 1 30.273 29.773 30.773 1.9073E-06 0 0 0 0.017737 1 14797 106.29 11.617 1 8203 1471 3117 3196 12839 12839 EIVNNIR 7 0 1 Unmodified _EIVNNIR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 429.2457 2 429.245609 856.476666 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.666 1 34.666 34.166 35.166 0 0 0 0 0.053226 1 15354 65.263 3.2656 1 8204 1471 3117 3196 12840 12840 EIVNNIR 7 0 1 Unmodified _EIVNNIR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 429.2455 2 429.245609 856.476666 90662.8 -0.098574 -4.2313E-05 -0.42687 -0.00018323 -0.52545 -0.00022555 429.245858547851 434.249286281541 34.855 1.2896 34.855 34.631 35.921 -3.8147E-06 407 108 10 0 0 0 0.02675 1 14914 77.944 3.112 1 1.2814 1.1188 0 136490000 54946000 81549000 8205 1471 3117 3196 12841 12841 EIVNNIRR 8 0 2 Unmodified _EIVNNIRR_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.3049 2 507.296165 1012.57778 82239.71 0.40494 0.00020543 0.43734 0.00022186 0.84228 0.00042729 507.296248581776 517.304617176319 24.456 0.51086 24.456 24.221 24.732 1.9073E-06 97 27 7 0 0 0 0.057961 1 8581 49.358 9.2554 1 1.4849 1.2595 0 8513100 3590900 4922200 8206 1471 3118 3197 12842 12842 EIVNNIRR 8 0 2 Unmodified _EIVNNIRR_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.3048 2 507.296165 1012.57778 83264.5 0.2722 0.00013808 0.11866 6.0197E-05 0.39086 0.00019828 507.296136391024 517.304428443751 24.383 0.69367 24.383 24.149 24.843 -1.9073E-06 114 34 7 0 0 0 0.057961 1 8030 49.358 9.2554 1 1.5436 1.4057 0 7218000 2548100 4669800 8207 1471 3118 3197 12843 12843 EIVQQSLSVGNFAAR 15 0 1 Unmodified _EIVQQSLSVGNFAAR_ 0 0 0 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.9346 2 809.931011 1617.84747 NaN NaN NaN 1.2094 0.00097952 NaN NaN NaN NaN 88.45 0.101 88.45 88.417 88.518 0 0 0 0 9.1703E-05 1 54587 79.82 46.591 1 NaN NaN 0 4828900 4828900 0 8208 1822 3119 3198 12844 12844 EIVQQSLSVGNFAAR 15 0 1 Unmodified _EIVQQSLSVGNFAAR_ 0 0 0 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 815.4368 2 809.931011 1617.84747 74974.67 0.47399 0.0003839 0.31315 0.00025363 0.78715 0.00063753 809.931182599199 814.935337888677 102.28 0.30006 102.28 102.09 102.39 0 59 23 4 0 0 0 0.0031676 2 57116 42.843 42.843 1 1.0857 0.94206 0 1597200 773430 823770 8209 1822 3119 3198 12845;12846 12845 EIVVIHQDPEALK 13 1 0 Unmodified _EIVVIHQDPEALK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2836 3 497.611958 1489.81404 NaN NaN NaN 0.38408 0.00019112 NaN NaN NaN NaN 65.987 0.83978 65.987 65.52 66.359 0 0 0 0 0.031766 1 37863 33.204 21.288 1 NaN NaN 0 22291000 0 22291000 8210 1561 3120 3199 12847 12847 EIVVIHQDPEALK 13 1 0 Unmodified _EIVVIHQDPEALK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.9224 2 745.914298 1489.81404 74311.21 0.54738 0.0004083 0.2371 0.00017685 0.78447 0.00058515 746.416082559923 749.921699893785 64.166 0.42437 64.166 63.995 64.419 0 107 38 4 0 0 0 0.0026504 1 37730 54.343 54.343 1 1.9826 2.0763 0 10617000 3180700 7436000 8211 1561 3120 3199 12848 12848 EIVVIHQDPEALK 13 1 0 Unmodified _EIVVIHQDPEALK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2827 3 497.611958 1489.81404 NaN NaN NaN -2.9782 -0.001482 NaN NaN NaN NaN 64.107 0.74339 64.107 63.686 64.429 0 0 0 0 0.034015 1 37754 32.275 8.8994 1 NaN NaN 0 14108000 0 14108000 8212 1561 3120 3199 12849 12849 EIVVIHQDPEALK 13 1 0 Unmodified _EIVVIHQDPEALK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.2842 3 497.611958 1489.81404 86291.17 0.33613 0.00016726 -0.54739 -0.00027239 -0.21126 -0.00010513 497.611599563392 500.283410389536 74.967 0.4724 74.967 74.753 75.225 0 136 34 6 0 0 0 0.0083959 1 39827 34.179 34.179 1 0.85797 0.67493 0 3996000 2223700 1772400 8213 1561 3120 3199 12850 12850 EIVVLETLEDIDK 13 1 0 Unmodified _EIVVLETLEDIDK_ 0 0 0 V9HW95;Q15293;E9PP27;Q5J7V8 V9HW95 V9HW95 HEL-S-84;RCN1 Reticulocalbin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.4177 2 758.411254 1514.80796 NaN NaN NaN 0.11465 8.6955E-05 NaN NaN NaN NaN 122.23 0.37024 122.23 122.02 122.39 0 0 0 0 0.0020578 1 80962 71.896 45.779 1 NaN NaN 0 5676400 0 5676400 8214 1757 3121 3200 12851 12851 EIVVTDYSDQNLQELEK 17 1 0 Unmodified _EIVVTDYSDQNLQELEK_ 0 0 0 Q6FH49;P40261 Q6FH49 Q6FH49 NNMT Nicotinamide N-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1016.5071 2 1011.99694 2021.97933 NaN NaN NaN -0.39642 -0.00040117 NaN NaN NaN NaN 95.477 0.3321 95.477 95.263 95.595 0 0 0 0 0.012274 1 57949 42.031 16.645 1 NaN NaN 0 4577300 0 4577300 8215 1557 3122 3201 12852 12852 EIVVTDYSDQNLQELEK 17 1 0 Unmodified _EIVVTDYSDQNLQELEK_ 0 0 0 Q6FH49;P40261 Q6FH49 Q6FH49 NNMT Nicotinamide N-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1016.5044 2 1011.99694 2021.97933 NaN NaN NaN -0.98177 -0.00099355 NaN NaN NaN NaN 94.79 0.31429 94.79 94.617 94.931 0 0 0 0 6.807E-07 2 58997 87.001 63.252 1 NaN NaN 0 5903900 0 5903900 8216 1557 3122 3201 12853;12854 12854 EIWELIGIPEDQR 13 0 1 Unmodified _EIWELIGIPEDQR_ 0 0 0 A0A024RC67;O43663;H0YM42;H0YLA0 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.416 2 799.414662 1596.81477 NaN NaN NaN 0.39547 0.00031614 NaN NaN NaN NaN 120.52 0.58045 120.52 120.25 120.83 -7.6294E-06 0 0 0 9.833E-21 1 77578 136.02 117.96 1 NaN NaN 0 17744000 17744000 0 8217 353 3123 3202 12855 12855 EIWELIGIPEDQR 13 0 1 Unmodified _EIWELIGIPEDQR_ 0 0 0 A0A024RC67;O43663;H0YM42;H0YLA0 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.415 2 799.414662 1596.81477 NaN NaN NaN 0.38043 0.00030412 NaN NaN NaN NaN 120.04 0.85172 120.04 119.64 120.49 0 0 0 0 4.8344E-21 1 79187 139.86 123.23 1 NaN NaN 0 21427000 21427000 0 8218 353 3123 3202 12856 12856 EIWELIGIPEDQR 13 0 1 Unmodified _EIWELIGIPEDQR_ 0 0 0 A0A024RC67;O43663;H0YM42;H0YLA0 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.4198 2 799.414662 1596.81477 67928.47 1.0726 0.00085743 -0.11163 -8.9241E-05 0.96094 0.00076819 799.414656339884 804.41827284808 132.4 0.71774 132.4 132.1 132.82 0 179 32 8 0 0 0 1.4344E-13 2 80410 131.82 131.82 1 1.1173 0.94193 0 9695600 4894400 4801300 8219 353 3123 3202 12857;12858 12858 EIWELIGIPEDQR 13 0 1 Unmodified _EIWELIGIPEDQR_ 0 0 0 A0A024RC67;O43663;H0YM42;H0YLA0 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 804.42 2 799.414662 1596.81477 68423.46 1.109 0.00088654 0.073371 5.8654E-05 1.1824 0.00094519 799.414665360872 804.418721610028 132.14 0.90417 132.14 131.69 132.59 0 172 38 8 0 0 0 1.9332E-05 2 79331 99.283 99.283 1 1.0491 0.85821 0 9098000 4890600 4207400 8220 353 3123 3202 12859;12860 12860 EIYDDLQALHTDDPLTWDYVAR 22 0 1 Unmodified _EIYDDLQALHTDDPLTWDYVAR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 887.4256 3 883.753764 2648.23946 64844.36 0.81895 0.00072375 -0.023424 -2.0701E-05 0.79552 0.00070305 884.087937265397 887.424658766049 132.02 0.64128 132.02 131.81 132.45 0 195 30 9 0 0 0 9.7956E-09 2 80190 72.015 72.015 1 1.3848 1.1433 0 18973000 7487800 11485000 8221 925 3124 3203 12861;12862 12861 EIYDDLQALHTDDPLTWDYVAR 22 0 1 Unmodified _EIYDDLQALHTDDPLTWDYVAR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 887.4262 3 883.753764 2648.23946 65030.16 0.71297 0.00063009 0.85727 0.00075761 1.5702 0.0013877 884.088690321455 887.425257976871 131.84 0.66399 131.84 131.56 132.23 0 154 27 10 0 0 0 4.4727E-09 2 79182 76.186 76.186 1 1.2593 1.0858 0 22407000 9626800 12780000 8222 925 3124 3203 12863;12864 12864 EIYENMAPGENK 12 1 0 Oxidation (M) _EIYENM(ox)APGENK_ EIYENM(1)APGENK EIYENM(127.76)APGENK 0 1 0 Q59EG8;Q13200;B4DM22;Q9NSM5;C9JPC0;H7C2Q3 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.8216 2 705.813924 1409.61329 76007.27 0.63475 0.00044801 -0.10075 -7.1113E-05 0.53399 0.0003769 705.813497082584 709.821307322534 26.535 0.28578 26.535 26.37 26.656 0 56 15 6 0 0 0 7.4633E-13 2 11898 127.76 102.99 1 3.0028 3.1274 0 14937000 3494300 11443000 8223 1707 3125 3204 12865;12866 12865 1538 EIYENMAPGENK 12 1 0 Oxidation (M) _EIYENM(ox)APGENK_ EIYENM(1)APGENK EIYENM(116.52)APGENK 0 1 0 Q59EG8;Q13200;B4DM22;Q9NSM5;C9JPC0;H7C2Q3 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.8215 2 705.813924 1409.61329 72699.87 0.83204 0.00058727 -0.17138 -0.00012096 0.66066 0.0004663 705.813434897028 709.821083983194 26.134 0.36977 26.134 25.987 26.356 0 46 18 6 0 0 0 1.9066E-08 4 11595 116.52 95.07 1 3.7333 3.734 0 15419000 3669200 11750000 8224 1707 3125 3204 12867;12868;12869;12870 12867 1538 EKEEEELMEK 10 2 0 Oxidation (M) _EKEEEELM(ox)EK_ EKEEEELM(1)EK EKEEEELM(75.51)EK 0 1 1 Q9UK43;Q95HA6;B2R5Y4;Q13123;Q9Y3Z5;D6REL4;Q9H4P6;E7EQZ7 Q9UK43 Q9UK43 CSA2;IK;DKFZp564B112 Protein Red MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.797 2 655.295033 1308.57551 74010.02 0.66783 0.00043763 0.20927 0.00013714 0.87711 0.00057476 655.294976816347 663.309960666618 17.528 0.19622 17.528 17.421 17.617 0 35 8 6 0 0 0 0.00096894 1 4665 75.509 40.064 1 1.0457 1.1584 0 5357500 2467800 2889700 8225 838 3126 3205 12871 12871 666 EKEELEEIR 9 1 1 Unmodified _EKEELEEIR_ 0 0 1 P49756 P49756 P49756 RBM25 RNA-binding protein 25 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8019 2 587.801143 1173.58773 NaN NaN NaN -0.4442 -0.0002611 NaN NaN NaN NaN 28.106 0.1385 28.106 28.01 28.149 -1.9073E-06 0 0 0 0.019677 1 13307 85.731 24.82 1 NaN NaN 0 2770800 2770800 0 8226 1587 3127 3206 12872 12872 EKEELVLELQTAK 13 2 0 Unmodified _EKEELVLELQTAK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.4381 2 765.424696 1528.83484 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.668 1 74.668 74.168 75.168 0 0 0 0 1.1963E-05 1 43841 96.059 84.958 1 8227 1803 3128 3207 12873 12873 EKEELVLELQTAK 13 2 0 Unmodified _EKEELVLELQTAK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.6174 3 510.618889 1528.83484 NaN NaN NaN -0.26759 -0.00013663 NaN NaN NaN NaN 73.05 0.43134 73.05 72.764 73.195 0 0 0 0 0.016916 1 43840 34.92 24.581 1 NaN NaN 0 6321900 6321900 0 8228 1803 3128 3207 12874 12874 EKEELVLELQTAK 13 2 0 Unmodified _EKEELVLELQTAK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.9628 3 510.618889 1528.83484 83576.25 0.39701 0.00020272 -0.38652 -0.00019736 0.010485 5.354E-06 510.61834398571 515.961679878726 84.743 0.63358 84.743 84.491 85.125 0 222 45 7 0 0 0 0.05621 1 46190 21.249 21.249 1 1.4197 1.2188 0 7507800 2981700 4526200 8229 1803 3128 3207 12875 12875 EKEELVLELQTAK 13 2 0 Unmodified _EKEELVLELQTAK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 773.44 2 765.424696 1528.83484 69615.58 0.61098 0.00046766 0.5849 0.0004477 1.1959 0.00091536 765.424741133128 773.439074770149 84.695 0.58803 84.695 84.505 85.093 0 233 42 7 0 0 0 0.00030116 2 46197 115.57 115.57 1 1.4247 1.2179 0 12191000 4610500 7580800 8230 1803 3128 3207 12876;12877 12876 EKEELVLELQTAK 13 2 0 Unmodified _EKEELVLELQTAK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.9281 2 765.424696 1528.83484 69552.94 0.84997 0.00065059 0.57977 0.00044377 1.4297 0.0010944 765.425031425535 773.43920764456 84.744 0.67015 84.744 84.43 85.1 0 248 48 8 0 0 0 0.00063033 2 45378 107.39 107.39 1 1.5715 1.3288 0 12331000 5191400 7139800 8231 1803 3128 3207 12878;12879 12879 EKEELVLELQTAK 13 2 0 Unmodified _EKEELVLELQTAK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.6189 3 510.618889 1528.83484 83928.2 0.49811 0.00025434 -0.23557 -0.00012029 0.26253 0.00013405 510.618408797819 515.961809155282 84.718 0.54719 84.718 84.449 84.996 -7.6294E-06 187 40 6 0 0 0 0.047926 1 45458 22.365 22.365 1 1.3999 1.1863 0 6459400 3153600 3305800 8232 1803 3128 3207 12880 12880 EKEMEADERDRKR 13 2 3 Unmodified _EKEMEADERDRKR_ 0 0 4 P49756 P49756 P49756 RBM25 RNA-binding protein 25 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.4109 2 846.410117 1690.80568 NaN NaN NaN -0.37453 -0.000317 NaN NaN NaN NaN 54.923 0.7064 54.923 54.643 55.349 0 0 0 0 0.011482 1 30765 44.318 9.5968 1 NaN NaN 0 39923000 39923000 0 8233 1587 3129 3208 12881 12881 EKIIDQVYR 9 1 1 Unmodified _EKIIDQVYR_ 0 0 1 O15031;A0A087WU36;Q16293;Q3LIB1 O15031 O15031 PLXNB2;MM1;Nbla00445 Plexin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 388.5519 3 388.552151 1162.63462 94859.88 0.22002 8.549E-05 -0.13097 -5.089E-05 0.08905 3.46E-05 388.552055819915 394.559409270324 65.981 1.7633 65.981 65.37 67.133 0 611 148 5 0 0 0 0.023441 2 37809 31.494 5.9349 1 0.41267 0.49575 0 71144000 48597000 22547000 8234 1373 3130 3209 12882;12883 12882 EKLEAEMK 8 2 0 Unmodified _EKLEAEMK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.2662 2 489.252243 976.489932 86702.84 -0.07706 -3.7702E-05 -0.65611 -0.000321 -0.73317 -0.0003587 489.252217437672 497.266395437309 22.79 0.45364 22.79 22.527 22.981 0 53 17 5 0 0 0 0.054766 1 7022 72.879 55.494 1 2.1198 1.8218 0 3643500 1246200 2397300 8235 69 3131 3210 12884 12884 EKLKARRNR 9 2 3 Unmodified _EKLKARRNR_ 0 0 4 Q6P158;Q59G60;H7C109;B4DKW2 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1171.7214 1 1170.7178 1169.71052 NaN NaN NaN -0.97734 -0.0011442 NaN NaN NaN NaN 131.76 0.52475 131.76 131.48 132.01 0 0 0 0 0.029791 1 85924 30.185 20.597 1 NaN NaN 0 5480500 5480500 0 8236 1850 3132 3211 12885 12885 EKPDIFQLVSVK 12 2 0 Unmodified _EKPDIFQLVSVK_ 0 0 1 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.2697 3 468.269532 1401.78677 90205.37 0.31641 0.00014817 0.23762 0.00011127 0.55404 0.00025944 468.269497064334 473.612448672892 100.49 0.55633 100.49 100.25 100.8 0 143 43 7 0 0 0 0.0058347 1 61584 34 34 1 0.77491 0.91161 0 14135000 7273400 6861900 8237 716 3133 3212 12886 12886 EKPDIFQLVSVK 12 2 0 Unmodified _EKPDIFQLVSVK_ 0 0 1 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.9143 2 701.90066 1401.78677 72988.98 0.86231 0.00060526 0.16375 0.00011494 1.0261 0.00072019 701.900701214147 709.914943637199 100.49 1.3095 100.49 99.946 101.26 0 487 104 7 0 0 0 0.014032 1 61885 58.172 58.172 1 0.91455 1.0795 0 77504000 41672000 35833000 8238 716 3133 3212 12887 12887 EKPDIFQLVSVK 12 2 0 Unmodified _EKPDIFQLVSVK_ 0 0 1 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.9014 2 701.90066 1401.78677 72736.37 0.75171 0.00052763 -0.022166 -1.5559E-05 0.72955 0.00051207 701.900634516752 709.91491630199 99.194 1.0921 99.194 98.691 99.783 0 517 90 8 0 0 0 1.4569E-07 1 62020 119.27 119.27 1 0.90538 1.0522 0 128350000 66192000 62159000 8239 716 3133 3212 12888 12888 EKPDIFQLVSVK 12 2 0 Unmodified _EKPDIFQLVSVK_ 0 0 1 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.6036 3 468.269532 1401.78677 90579.23 0.32544 0.00015239 0.11444 5.359E-05 0.43988 0.00020598 468.269517943083 473.612357820924 99.142 0.60343 99.142 98.936 99.539 0 138 52 5 0 0 0 0.0058347 3 62146 34 34 1 0.88657 1.0163 0 20588000 10596000 9992000 8240 716 3133 3212 12889;12890;12891 12891 EKPVDLQNFGLR 12 1 1 Unmodified _EKPVDLQNFGLR_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.399 2 708.385708 1414.75686 73481.52 0.53459 0.00037869 0.4022 0.00028491 0.93678 0.0006636 708.385866294788 717.39767553765 77.443 0.5623 77.443 77.197 77.76 0 190 45 6 0 0 0 0.030366 1 45687 50.452 41.758 1 0.71951 0.80157 0 20092000 10874000 9217900 8241 1798 3134 3213 12892 12892 EKPVDLQNFGLR 12 1 1 Unmodified _EKPVDLQNFGLR_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.3862 2 708.385708 1414.75686 73101.84 0.35372 0.00025057 0.25177 0.00017835 0.60549 0.00042892 708.385818414606 717.398098123074 76.039 0.49986 76.039 75.819 76.319 0 233 46 7 0 0 0 0.02353 2 45975 53.683 39.397 1 0.74632 0.85981 0 28078000 15126000 12952000 8242 1798 3134 3213 12893;12894 12894 EKPYFPIPEEYTFIQNVPLEDR 22 1 1 Unmodified _EKPYFPIPEEYTFIQNVPLEDR_ 0 0 1 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 915.1326 3 908.790038 2723.34828 63197.08 0.74043 0.00067289 0.12669 0.00011514 0.86712 0.00078803 909.12437669488 915.132039307535 123.23 1.0925 123.23 122.69 123.79 0 618 82 9 0 0 0 0.0019821 3 80100 27.081 23.869 1 1.2633 1.4497 0 26682000 13419000 13263000 8243 999 3135 3214 12895;12896;12897 12897 EKPYFPIPEEYTFIQNVPLEDR 22 1 1 Unmodified _EKPYFPIPEEYTFIQNVPLEDR_ 0 0 1 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 909.1262 3 908.790038 2723.34828 63857.38 0.7901 0.00071804 -0.11908 -0.00010822 0.67102 0.00060982 909.124280648758 915.131788521634 122.44 1.1468 122.44 121.98 123.12 0 666 87 11 0 0 0 0.0023643 3 80975 25.15 25.15 1 1.212 1.4059 0 36317000 17269000 19048000 8244 999 3135 3214 12898;12899;12900 12898 EKPYFPIPEEYTFIQNVPLEDR 22 1 1 Unmodified _EKPYFPIPEEYTFIQNVPLEDR_ 0 0 1 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 909.1265 3 908.790038 2723.34828 62623.63 0.8442 0.0007672 -0.19858 -0.00018047 0.64562 0.00058673 909.124223824197 915.131526941005 134.01 0.53741 134.01 133.81 134.35 0 196 23 15 0 0 0 2.792E-08 1 81634 66.871 60.514 1 0.82028 0.74042 0 124880000 68930000 55948000 8245 999 3135 3214 12901 12901 EKPYFPIPEEYTFIQNVPLEDR 22 1 1 Unmodified _EKPYFPIPEEYTFIQNVPLEDR_ 0 0 1 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 909.1251 3 908.790038 2723.34828 63068.87 0.97846 0.00088921 -0.016593 -1.508E-05 0.96186 0.00087413 909.124409204893 915.13178256624 133.77 0.66954 133.77 133.5 134.17 0 269 31 13 0 0 0 8.6587E-09 2 80551 74.364 71.208 1 0.77801 0.66403 0 68486000 37587000 30899000 8246 999 3135 3214 12902;12903 12902 EKQDEQVGLPGK 12 2 0 Unmodified _EKQDEQVGLPGK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.3484 2 664.346249 1326.67794 NaN NaN NaN -0.16374 -0.00010878 NaN NaN NaN NaN 25.852 0.21689 25.852 25.743 25.96 0 0 0 0 6.6782E-21 1 11375 143.5 102.78 1 NaN NaN 0 16273000 16273000 0 8247 1471 3136 3215 12904 12904 EKQDEQVGLPGK 12 2 0 Unmodified _EKQDEQVGLPGK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3608 2 664.346249 1326.67794 NaN NaN NaN 0.19907 0.00013225 NaN NaN NaN NaN 25.436 0.21283 25.436 25.304 25.517 0 0 0 0 0.022709 1 11111 74.533 57.695 1 NaN NaN 0 10973000 0 10973000 8248 1471 3136 3215 12905 12905 EKQDEQVGLPGK 12 2 0 Unmodified _EKQDEQVGLPGK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.361 2 664.346249 1326.67794 74065.73 0.46783 0.0003108 0.10906 7.2453E-05 0.57689 0.00038326 664.346295689879 672.360479500498 28.724 0.90414 28.724 28.43 29.334 -1.9073E-06 409 65 8 0 0 0 8.8471E-22 2 11455 166.29 166.29 1 1.3658 1.1633 0 24432000 9913400 14518000 8249 1471 3136 3215 12906;12907 12906 EKQDEQVGLPGK 12 2 0 Unmodified _EKQDEQVGLPGK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.5757 3 443.233258 1326.67794 87999.2 -0.071501 -3.1692E-05 -0.50565 -0.00022412 -0.57715 -0.00025581 443.232764984264 448.575867436778 28.727 0.8205 28.727 28.43 29.251 0 350 60 8 0 0 0 0.034102 2 11562 28.327 25.199 1 1.3626 1.1629 0 16714000 7247600 9466400 8250 1471 3136 3215 12908;12909 12909 EKQDEQVGLPGK 12 2 0 Unmodified _EKQDEQVGLPGK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.361 2 664.346249 1326.67794 74566.1 0.20382 0.0001354 0.34373 0.00022835 0.54754 0.00036376 664.346452263528 672.360666089969 28.922 0.85409 28.922 28.705 29.559 -1.9073E-06 298 50 10 0 0 0 0.001306 1 11058 73.887 70.124 1 1.4277 1.216 0 42766000 17423000 25343000 8251 1471 3136 3215 12910 12910 EKQDEQVGLPGK 12 2 0 Unmodified _EKQDEQVGLPGK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 448.5755 3 443.233258 1326.67794 88094.77 -0.26155 -0.00011593 -0.096131 -4.2608E-05 -0.35768 -0.00015854 443.2331214652 448.576016130558 28.919 0.75806 28.919 28.705 29.463 0 229 45 8 0 0 0 0.004311 2 11087 35.523 31.409 1 1.3812 1.1732 0 26844000 11322000 15522000 8252 1471 3136 3215 12911;12912 12911 EKVEEFK 7 2 0 Unmodified _EKVEEFK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5;Q6NSG3;Q58F29 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 462.7543 2 454.739825 907.465098 89408.73 -0.20704 -9.4147E-05 0.20447 9.2981E-05 -0.0025646 -1.1662E-06 454.739910364206 462.754066172993 20.389 0.27901 20.389 20.234 20.513 -1.9073E-06 27 7 7 0 0 0 0.054465 1 5818 119.41 37.623 1 1.7633 1.5072 0 12339000 4355300 7984100 8253 2070 3137 3216 12913 12913 EKYEITEQR 9 1 1 Unmodified _EKYEITEQR_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.3123 2 598.30131 1194.58807 78106.09 0.86201 0.00051574 0.088995 5.3246E-05 0.951 0.00056899 598.30134792496 607.312387124304 22.407 0.44899 22.407 22.197 22.646 0 144 28 7 0 0 0 0.0040579 2 8426 94.85 85.527 1 0.87056 1.0433 0 58349000 32559000 25789000 8254 342 3138 3217 12914;12915 12914 EKYEITEQR 9 1 1 Unmodified _EKYEITEQR_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.3012 2 598.30131 1194.58807 78270.9 0.23846 0.00014267 0.30124 0.00018023 0.5397 0.0003229 598.30141226103 607.312618420736 22.055 0.47954 22.055 21.866 22.346 0 94 21 7 0 0 0 5.2285E-11 3 8076 155.58 136.1 1 1.0134 1.1919 0 72829000 36656000 36173000 8255 342 3138 3217 12916;12917;12918 12916 EKYEITEQR 9 1 1 Unmodified _EKYEITEQR_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.3018 2 598.30131 1194.58807 77260.37 0.53151 0.000318 -0.28312 -0.00016939 0.24839 0.00014861 598.301203917298 607.31230851615 24.657 0.93922 24.657 24.298 25.237 -1.9073E-06 252 50 11 0 0 0 0.0028581 2 8661 97.965 93.556 1 0.78182 0.69231 0 47726000 27196000 20530000 8256 342 3138 3217 12919;12920 12920 EKYEITEQR 9 1 1 Unmodified _EKYEITEQR_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.313 2 598.30131 1194.58807 77385.27 0.53259 0.00031865 -0.29489 -0.00017643 0.2377 0.00014221 598.301165461053 607.312345236846 24.574 0.8252 24.574 24.326 25.151 1.9073E-06 216 40 10 0 0 0 0.00013953 2 8152 113.18 103.19 1 0.77334 0.65863 0 43896000 23144000 20752000 8257 342 3138 3217 12921;12922 12922 ELAAEVEVQDGPNEDGEMFMRPGK 24 1 1 2 Oxidation (M) _ELAAEVEVQDGPNEDGEM(ox)FM(ox)RPGK_ ELAAEVEVQDGPNEDGEM(1)FM(1)RPGK ELAAEVEVQDGPNEDGEM(55.59)FM(55.59)RPGK 0 2 1 Q8TBT6;P08574 Q8TBT6 Q8TBT6 CYC1 Cytochrome c1, heme protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.0764 3 894.067025 2679.17925 63912.68 0.59441 0.00053144 -0.16474 -0.00014729 0.42967 0.00038415 894.401004423876 900.408794856059 71.319 0.53881 71.319 71.016 71.554 0 267 45 9 0 0 0 2.9321E-09 1 41481 55.588 55.588 1 1.6428 1.8918 0 27581000 9404200 18177000 8258 1456 3139 3218 12923 12923 1168;1169 ELAAEVEVQDGPNEDGEMFMRPGK 24 1 1 2 Oxidation (M) _ELAAEVEVQDGPNEDGEM(ox)FM(ox)RPGK_ ELAAEVEVQDGPNEDGEM(1)FM(1)RPGK ELAAEVEVQDGPNEDGEM(76.19)FM(76.19)RPGK 0 2 1 Q8TBT6;P08574 Q8TBT6 Q8TBT6 CYC1 Cytochrome c1, heme protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.4084 3 894.067025 2679.17925 64299.64 0.41175 0.00036813 -0.1378 -0.0001232 0.27395 0.00024493 894.401421218207 900.408705247024 70.174 0.54646 70.174 69.872 70.418 7.6294E-06 260 45 9 0 0 0 5.693E-13 2 41833 76.186 76.186 1 1.6252 1.8817 0 33714000 14054000 19660000 8259 1456 3139 3218 12924;12925 12925 1168;1169 ELAAGAFGTK 10 1 0 Unmodified _ELAAGAFGTK_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.7588 2 482.758549 963.502546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.498 1 46.498 45.998 46.998 0 0 0 0 0.0095549 1 25130 58.083 6.0647 1 8260 512 3140 3219 12926 12926 ELAAGAFGTK 10 1 0 Unmodified _ELAAGAFGTK_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7668 2 482.758549 963.502546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.588 1 46.588 46.088 47.088 0 0 0 0 0.00032006 1 25197 76.221 42.864 1 8261 512 3140 3219 12927 12927 ELAAGAFGTK 10 1 0 Unmodified _ELAAGAFGTK_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7657 2 482.758549 963.502546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.673 1 45.673 45.173 46.173 0 0 0 0 0.039525 1 25089 47.187 13.374 1 8262 512 3140 3219 12928 12928 ELAAGTESQALVSATPR 17 0 1 Unmodified _ELAAGTESQALVSATPR_ 0 0 0 Q53FM2;B2R9C5;Q96IY1;Q5SY74;B4E071 Q53FM2 Q53FM2 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.9497 2 850.944315 1699.87408 69611.56 0.66909 0.00056936 -0.036738 -3.1262E-05 0.63235 0.00053809 851.446202007385 855.948347454123 73.027 0.42056 73.027 72.75 73.171 7.6294E-06 96 34 5 0 0 0 1.4136E-12 1 42783 116.51 116.51 1 0.86212 0.87573 0 15016000 7396700 7619700 8263 866 3141 3220 12929 12929 ELAAGTESQALVSATPR 17 0 1 Unmodified _ELAAGTESQALVSATPR_ 0 0 0 Q53FM2;B2R9C5;Q96IY1;Q5SY74;B4E071 Q53FM2 Q53FM2 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.9496 2 850.944315 1699.87408 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.886 1 71.886 71.386 72.386 0 0 0 0 1.0152E-12 1 43140 116.51 58.979 1 8264 866 3141 3220 12930 12930 ELAAGTESQALVSATPR 17 0 1 Unmodified _ELAAGTESQALVSATPR_ 0 0 0 Q53FM2;B2R9C5;Q96IY1;Q5SY74;B4E071 Q53FM2 Q53FM2 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 856.4493 2 850.944315 1699.87408 66708.69 0.57263 0.00048728 -0.28115 -0.00023924 0.29149 0.00024804 851.445827378427 855.948325023748 83.662 0.42693 83.662 83.475 83.902 0 143 33 6 0 0 0 0.00019547 2 45704 50.155 50.155 1 0.95723 0.8143 0 5367300 2195800 3171500 8265 866 3141 3220 12931;12932 12932 ELAAGTESQALVSATPR 17 0 1 Unmodified _ELAAGTESQALVSATPR_ 0 0 0 Q53FM2;B2R9C5;Q96IY1;Q5SY74;B4E071 Q53FM2 Q53FM2 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 851.4463 2 850.944315 1699.87408 67527.02 0.80764 0.00068726 -0.3855 -0.00032804 0.42214 0.00035922 850.943967574175 855.948024455041 83.862 0.409 83.862 83.637 84.046 -7.6294E-06 125 32 6 0 0 0 7.3373E-05 2 45005 67.275 67.275 1 0.96889 0.80388 0 5626300 2562500 3063800 8266 866 3141 3220 12933;12934 12934 ELAALPK 7 1 0 Unmodified _ELAALPK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 371.2286 2 371.228897 740.44324 99445.56 -0.15183 -5.6362E-05 0.27624 0.00010255 0.12442 4.6188E-05 371.228780155069 375.236217548708 45.696 0.96377 45.696 45.326 46.289 0 281 87 5 0 0 0 0.026734 1 24489 77.496 10.502 1 0.84965 0.94916 0 62980000 30458000 32522000 8267 1958 3142 3221 12935 12935 ELAAQLNEEAK 11 1 0 Unmodified _ELAAQLNEEAK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.3216 2 608.314417 1214.61428 76314.65 0.66613 0.00040522 -0.16488 -0.0001003 0.50125 0.00030492 608.314431418966 612.321362023807 42.501 0.74445 42.501 42.352 43.096 0 482 59 11 0 0 0 1.324E-32 2 22571 188.3 188.3 1 0.68975 0.825 0 852370000 489610000 362760000 8268 2148 3143 3222 12936;12937 12937 ELAAQLNEEAK 11 1 0 Unmodified _ELAAQLNEEAK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.3217 2 608.314417 1214.61428 76743.41 0.51113 0.00031093 -0.043722 -2.6597E-05 0.4674 0.00028433 608.314413407301 612.321414535841 41.982 1.1338 41.982 41.453 42.587 0 749 98 10 0 0 0 4.7203E-13 3 22395 148.5 132.62 1 0.68619 0.80788 0 452510000 278490000 174020000 8269 2148 3143 3222 12938;12939;12940 12938 ELAAQLNEEAK 11 1 0 Unmodified _ELAAQLNEEAK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.315 2 608.314417 1214.61428 76237.12 0.32944 0.0002004 0.23169 0.00014094 0.56113 0.00034134 608.314532870953 612.321486927744 49.378 1.2885 49.378 49.005 50.294 0 527 108 9 0 0 0 8.4085E-06 2 24033 109.44 109.44 1 0.86946 0.74472 0 74476000 39476000 35000000 8270 2148 3143 3222 12941;12942 12942 ELAAQLNEEAK 11 1 0 Unmodified _ELAAQLNEEAK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.3214 2 608.314417 1214.61428 76947.18 0.18891 0.00011491 -0.32053 -0.00019498 -0.13162 -8.0068E-05 608.314529784011 612.321481069252 49.757 1.3342 49.757 49.353 50.687 0 624 108 9 0 0 0 0.0004027 2 23656 81.263 81.263 1 0.89244 0.75719 0 68055000 36952000 31104000 8271 2148 3143 3222 12943;12944 12943 ELAEAMGAQHTAESECEQLVK 21 1 0 Oxidation (M) _ELAEAM(ox)GAQHTAESECEQLVK_ ELAEAM(1)GAQHTAESECEQLVK ELAEAM(42.64)GAQHTAESECEQLVK 0 1 0 A8K394 A8K394 A8K394 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.0238 3 783.022868 2346.04678 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.671 1 57.671 57.171 58.171 3.8147E-06 0 0 0 0.002013 1 32621 42.64 34.816 1 8272 718 3144 3223 12945 12945 554 ELAEAMGAQHTAESECEQLVK 21 1 0 Unmodified _ELAEAMGAQHTAESECEQLVK_ 0 0 0 A8K394 A8K394 A8K394 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.0253 3 777.69123 2330.05186 70884.86 0.66207 0.00051488 0.11596 9.0179E-05 0.77803 0.00060506 778.025344931031 780.36295144795 79.349 0.35983 79.349 79.166 79.526 0 66 20 5 0 0 0 0.026736 2 42750 16.93 16.93 1 1.6898 1.4277 0 1977500 703050 1274400 8273 718 3144 3224 12946;12947 12947 ELAEDGYSGVEVR 13 0 1 Unmodified _ELAEDGYSGVEVR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.3444 2 712.33862 1422.66269 71822.62 0.79873 0.00056896 1.0213 0.00072751 1.82 0.0012965 712.339770600287 717.343050734137 57.589 0.55757 57.589 57.276 57.834 0 140 43 5 0 0 0 9.3579E-06 1 32584 100.88 76.04 1 0.94835 0.97089 0 19096000 9920400 9175500 8274 1511 3145 3225 12948 12948 ELAEDGYSGVEVR 13 0 1 Unmodified _ELAEDGYSGVEVR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.3395 2 712.33862 1422.66269 71746.94 0.65376 0.0004657 -0.21837 -0.00015556 0.43538 0.00031014 712.338735912308 717.342636847347 59.024 0.97086 59.024 58.595 59.566 0 619 77 13 0 0 0 1.0989E-06 2 33427 140.78 130.41 1 1.0948 1.2966 0 424050000 196180000 227870000 8275 1511 3145 3225 12949;12950 12950 ELAEDGYSGVEVR 13 0 1 Unmodified _ELAEDGYSGVEVR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.344 2 712.33862 1422.66269 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.832 1 59.832 59.332 60.332 3.8147E-06 0 0 0 0.0096516 1 34127 54.471 24.998 1 8276 1511 3145 3225 12951 12951 ELAEDGYSGVEVR 13 0 1 Unmodified _ELAEDGYSGVEVR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.3443 2 712.33862 1422.66269 73208.09 0.71158 0.00050689 0.97583 0.00069512 1.6874 0.001202 712.340159325709 717.342764024555 56.629 0.71262 56.629 56.193 56.905 0 145 52 6 0 0 0 7.5482E-05 1 32621 94.616 65.92 1 1.0158 1.006 0 15557000 8215400 7341700 8277 1511 3145 3225 12952 12952 ELAEDGYSGVEVR 13 0 1 Unmodified _ELAEDGYSGVEVR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.338 2 712.33862 1422.66269 71440.66 0.61082 0.00043511 -0.45957 -0.00032737 0.15125 0.00010774 712.338423820678 717.342551612766 58.041 1.4877 58.041 57.265 58.753 0 652 122 10 0 0 0 4.6351E-30 3 33558 196.88 186.12 1 1.0892 1.2673 0 407410000 194130000 213280000 8278 1511 3145 3225 12953;12954;12955 12954 ELAEDGYSGVEVR 13 0 1 Unmodified _ELAEDGYSGVEVR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.3403 2 712.33862 1422.66269 70334.01 0.59484 0.00042373 -0.12997 -9.2584E-05 0.46487 0.00033115 712.338775142993 717.342740375447 68.66 1.0835 68.66 68.312 69.396 0 501 77 10 0 0 0 8.2077E-06 2 35823 129.88 124.94 1 1.0236 0.87734 0 41348000 20694000 20654000 8279 1511 3145 3225 12956;12957 12957 ELAEDGYSGVEVR 13 0 1 Unmodified _ELAEDGYSGVEVR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.3421 2 712.33862 1422.66269 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.822 1 66.822 66.322 67.322 -7.6294E-06 0 0 0 0.023203 1 34741 45.433 32.08 1 8280 1511 3145 3225 12958 12958 ELAEDGYSGVEVR 13 0 1 Unmodified _ELAEDGYSGVEVR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.3429 2 712.33862 1422.66269 70384.93 0.60126 0.0004283 -0.1926 -0.00013719 0.40866 0.00029111 712.338675948834 717.342740765464 69.299 1.0158 69.299 68.947 69.963 0 428 70 10 0 0 0 7.5355E-06 2 35395 103.18 98.737 1 1.0365 0.90408 0 37884000 19301000 18583000 8281 1511 3145 3225 12959;12960 12959 ELAEQLGLSTGEK 13 1 0 Unmodified _ELAEQLGLSTGEK_ 0 0 0 Q6IAM0;O75821;K7EL20;A8K5K5;B7Z1G0;K7ER90 Q6IAM0 Q6IAM0 EIF3G Eukaryotic translation initiation factor 3 subunit G MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.3667 2 687.859189 1373.70382 69006.57 0.52716 0.00036261 -1.6177 -0.0011128 -1.0905 -0.00075014 688.360135480877 692.365681356078 72.178 0.68703 72.178 71.796 72.483 -7.6294E-06 258 53 9 0 0 0 3.4058E-14 2 42188 136.49 118.98 1 1.2635 1.3301 0 30669000 12510000 18160000 8282 1414 3146 3226 12961;12962 12961 ELAEQLGLSTGEK 13 1 0 Unmodified _ELAEQLGLSTGEK_ 0 0 0 Q6IAM0;O75821;K7EL20;A8K5K5;B7Z1G0;K7ER90 Q6IAM0 Q6IAM0 EIF3G Eukaryotic translation initiation factor 3 subunit G MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.5144 2 687.859189 1373.70382 71665.91 0.54272 0.00037332 -0.93026 -0.00063989 -0.38754 -0.00026657 688.360021468762 692.366023661328 71.046 0.66429 71.046 70.675 71.34 0 263 50 7 0 0 0 0.0006214 1 42496 88.441 65.121 1 1.3892 1.4708 0 35767000 14302000 21465000 8283 1414 3146 3226 12963 12963 ELAEQLGLSTGEK 13 1 0 Unmodified _ELAEQLGLSTGEK_ 0 0 0 Q6IAM0;O75821;K7EL20;A8K5K5;B7Z1G0;K7ER90 Q6IAM0 Q6IAM0 EIF3G Eukaryotic translation initiation factor 3 subunit G MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.8581 2 687.859189 1373.70382 73357.2 0.48397 0.00033291 -0.27801 -0.00019123 0.20596 0.00014167 687.858541650261 691.866605659549 82.263 0.5752 82.263 81.988 82.563 0 109 33 5 0 0 0 0.034911 1 44657 32.523 22 1 1.5103 1.2678 0 1885300 670760 1214600 8284 1414 3146 3226 12964 12964 ELAEQTLNNIK 11 1 0 Unmodified _ELAEQTLNNIK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.8439 2 636.843342 1271.67213 NaN NaN NaN -0.71406 -0.00045475 NaN NaN NaN NaN 59.902 0.39542 59.902 59.788 60.183 0 0 0 0 1.1799E-16 1 34135 141.2 45.454 1 NaN NaN 0 12011000 12011000 0 8285 452 3147 3227 12965 12965 ELAEQTLNNIK 11 1 0 Unmodified _ELAEQTLNNIK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8438 2 636.843342 1271.67213 NaN NaN NaN -1.0075 -0.00064159 NaN NaN NaN NaN 58.852 0.21962 58.852 58.661 58.881 0 0 0 0 5.5418E-12 1 34210 125.82 47.301 1 NaN NaN 0 10014000 10014000 0 8286 452 3147 3227 12966 12966 ELAEQTLNNIK 11 1 0 Unmodified _ELAEQTLNNIK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.3458 2 636.843342 1271.67213 NaN NaN NaN -0.56589 -0.00036038 NaN NaN NaN NaN 59.405 0.55164 59.405 59.048 59.6 0 0 0 0 0.0022441 1 34589 76.465 26.929 1 NaN NaN 0 9764600 9764600 0 8287 452 3147 3227 12967 12967 ELAEQTLNNIK 11 1 0 Unmodified _ELAEQTLNNIK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.8422 2 636.843342 1271.67213 81017.29 0.34505 0.00021975 -0.61884 -0.0003941 -0.27378 -0.00017436 636.843518303759 640.84977266106 69.695 0.66525 69.695 69.555 70.22 -7.6294E-06 135 61 4 0 0 0 0.00035999 2 36567 84.615 49.17 1 1.5603 1.2358 0 4197800 1576600 2621200 8288 452 3147 3227 12968;12969 12968 ELAEQTLNNIK 11 1 0 Unmodified _ELAEQTLNNIK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8425 2 636.843342 1271.67213 84276.77 0.38743 0.00024673 -0.78947 -0.00050277 -0.40204 -0.00025603 636.843178569365 640.849783157902 70.262 0.44698 70.262 70.101 70.548 0 105 40 4 0 0 0 0.00024995 3 36119 90.64 56.684 1 1.2599 1.0336 0 5136600 2590900 2545700 8289 452 3147 3227 12970;12971;12972 12971 ELAFQISK 8 1 0 Unmodified _ELAFQISK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;B4DIJ6;F6QYI9;A0A0G2JJL7;F6R6M7;K7EN69;Q7KYK3;A0A140T9K2;A0A140T9N3;O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 A0A024RCM3;O00148;A0A0D9SEM9 O00148 hCG_2005638;DDX39B;DDX39A;BAT1;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.2641 2 468.263468 934.512382 88832.05 0.32051 0.00015008 0.15042 7.0436E-05 0.47093 0.00022052 468.263482363662 472.270640220425 70.307 0.96022 70.307 69.908 70.868 0 401 83 7 0 0 0 0.0010076 2 40903 117.1 81.897 1 1.577 1.7202 0 50153000 19123000 31030000 8290 1359;362;521 3148 3228 12973;12974 12974 ELAFQISK 8 1 0 Unmodified _ELAFQISK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;B4DIJ6;F6QYI9;A0A0G2JJL7;F6R6M7;K7EN69;Q7KYK3;A0A140T9K2;A0A140T9N3;O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 A0A024RCM3;O00148;A0A0D9SEM9 O00148 hCG_2005638;DDX39B;DDX39A;BAT1;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.2634 2 468.263468 934.512382 88740.02 0.27423 0.00012841 0.11257 5.271E-05 0.3868 0.00018112 468.263259416021 472.2706504815 69.141 0.88873 69.141 68.73 69.618 0 327 75 6 0 0 0 0.0080668 2 41096 80.229 54.402 1 1.5623 1.7566 0 72599000 31508000 41091000 8291 1359;362;521 3148 3228 12975;12976 12976 ELAFQISK 8 1 0 Unmodified _ELAFQISK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;B4DIJ6;F6QYI9;A0A0G2JJL7;F6R6M7;K7EN69;Q7KYK3;A0A140T9K2;A0A140T9N3;O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 A0A024RCM3;O00148;A0A0D9SEM9 O00148 hCG_2005638;DDX39B;DDX39A;BAT1;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 472.271 2 468.263468 934.512382 90356.37 0.10456 4.8963E-05 0.43097 0.00020181 0.53553 0.00025077 468.263631940691 472.270648976533 80.103 0.69261 80.103 79.701 80.393 0 189 43 6 0 0 0 0.032472 2 43154 50.607 35.67 1 0.80236 0.63587 0 4214700 2414200 1800500 8292 1359;362;521 3148 3228 12977;12978 12978 ELAFQISK 8 1 0 Unmodified _ELAFQISK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;B4DIJ6;F6QYI9;A0A0G2JJL7;F6R6M7;K7EN69;Q7KYK3;A0A140T9K2;A0A140T9N3;O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 A0A024RCM3;O00148;A0A0D9SEM9 O00148 hCG_2005638;DDX39B;DDX39A;BAT1;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 472.2708 2 468.263468 934.512382 88892.42 0.21248 9.9496E-05 0.24824 0.00011624 0.46072 0.00021574 468.263578162585 472.270510183133 80.272 0.69537 80.272 79.915 80.61 0 184 41 6 0 0 0 0.024949 2 42411 55.531 42.023 1 0.82143 0.65208 0 4014200 2325300 1688900 8293 1359;362;521 3148 3228 12979;12980 12980 ELAILLGMLDPAEK 14 1 0 Oxidation (M) _ELAILLGM(ox)LDPAEK_ ELAILLGM(1)LDPAEK ELAILLGM(89.8)LDPAEK 0 1 0 V9HWC7;P30041;A4UCS6 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.9268 2 764.918192 1527.82183 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.2 1 120.2 119.7 120.7 0 0 0 0 9.3521E-05 1 77451 89.805 62.323 1 8294 1527 3149 3229 12981 12981 1294 ELAILLGMLDPAEK 14 1 0 Oxidation (M) _ELAILLGM(ox)LDPAEK_ ELAILLGM(1)LDPAEK ELAILLGM(79.82)LDPAEK 0 1 0 V9HWC7;P30041;A4UCS6 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.9261 2 764.918192 1527.82183 NaN NaN NaN 0.25306 0.00019357 NaN NaN NaN NaN 119.75 0.71458 119.75 119.33 120.04 0 0 0 0 0.00012194 1 78797 79.82 57.179 1 NaN NaN 0 4392200 0 4392200 8295 1527 3149 3229 12982 12982 1294 ELAIQIDEVLSHFTK 15 1 0 Unmodified _ELAIQIDEVLSHFTK_ 0 0 0 B4DVE4;F5H5U2;A0A024RBS0;Q8NHQ9;E7EX41;Q8TEC9 B4DVE4 B4DVE4 DDX55 ATP-dependent RNA helicase DDX55 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.3207 3 581.64896 1741.92505 NaN NaN NaN -0.30139 -0.0001753 NaN NaN NaN NaN 124.4 0.20017 124.4 124.28 124.48 0 0 0 0 0.014605 1 80769 37.092 30.476 1 NaN NaN 0 2294300 0 2294300 8296 344 3150 3230 12983 12983 ELAIQIDEVLSHFTK 15 1 0 Unmodified _ELAIQIDEVLSHFTK_ 0 0 0 B4DVE4;F5H5U2;A0A024RBS0;Q8NHQ9;E7EX41;Q8TEC9 B4DVE4 B4DVE4 DDX55 ATP-dependent RNA helicase DDX55 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3213 3 581.64896 1741.92505 NaN NaN NaN -0.13765 -8.0062E-05 NaN NaN NaN NaN 123.98 0.35076 123.98 123.69 124.04 7.6294E-06 0 0 0 0.047283 1 82275 26.148 18.172 1 NaN NaN 0 2014100 0 2014100 8297 344 3150 3230 12984 12984 ELALALQEALEPAVR 15 0 1 Unmodified _ELALALQEALEPAVR_ 0 0 0 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.9603 2 811.959237 1621.90392 68394.8 0.8114 0.00065883 0.20789 0.0001688 1.0193 0.00082762 811.959065051709 816.963379347283 119.78 0.66049 119.78 119.47 120.13 7.6294E-06 171 44 7 0 0 0 2.673E-47 2 77096 178.1 166.89 1 0.78828 0.79501 0 15602000 8322600 7279700 8298 1814 3151 3231 12985;12986 12986 ELALALQEALEPAVR 15 0 1 Unmodified _ELALALQEALEPAVR_ 0 0 0 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.9638 2 811.959237 1621.90392 68498.31 0.88134 0.00071561 0.19069 0.00015483 1.072 0.00087044 811.959051383304 816.9634865964 119.26 0.49989 119.26 119.02 119.52 0 145 34 6 0 0 0 6.7186E-22 3 78504 142.1 142.1 1 0.83077 0.90875 0 30645000 16565000 14080000 8299 1814 3151 3231 12987;12988;12989 12988 ELALALQEALEPAVR 15 0 1 Unmodified _ELALALQEALEPAVR_ 0 0 0 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.9601 2 811.959237 1621.90392 68461.8 1.0067 0.00081743 -0.047172 -3.8302E-05 0.95957 0.00077913 811.959109821363 816.963286760849 132.2 0.54385 132.2 132 132.54 0 119 25 7 0 0 0 0.00015932 1 80287 78.884 73.16 1 0.82278 0.70372 0 8723600 4906900 3816700 8300 1814 3151 3231 12990 12990 ELALALQEALEPAVR 15 0 1 Unmodified _ELALALQEALEPAVR_ 0 0 0 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.9599 2 811.959237 1621.90392 68757.78 1.1318 0.00091894 0.42322 0.00034364 1.555 0.0012626 811.959524723413 816.963639828126 131.92 0.47618 131.92 131.75 132.23 0 109 21 7 0 0 0 8.5739E-05 1 79211 83.314 83.314 1 0.81859 0.68073 0 7456000 3916300 3539600 8301 1814 3151 3231 12991 12991 ELALQITK 8 1 0 Unmodified _ELALQITK_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.2857 2 458.279118 914.543683 90835.19 0.12603 5.7756E-05 0.48468 0.00022212 0.61071 0.00027988 458.279420470006 462.28635885181 67.206 0.9211 67.206 66.602 67.523 0 275 77 6 0 0 0 0.039022 1 39445 47.749 3.8904 1 1.0721 1.0913 0 26113000 17520000 8592500 8302 511 3152 3232 12992 12992 ELALQITK 8 1 0 Unmodified _ELALQITK_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 458.2792 2 458.279118 914.543683 89732.16 0.30534 0.00013993 -0.47591 -0.0002181 -0.17057 -7.8167E-05 458.278893606366 462.286028928108 75.48 0.99211 75.48 75.097 76.09 0 345 70 7 0 0 0 0.059544 1 40137 40.268 1.3058 1 1.3482 1.0796 0 8546100 3854000 4692100 8303 511 3152 3232 12993 12993 ELALQSFDTVQK 12 1 0 Unmodified _ELALQSFDTVQK_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.8655 2 689.864274 1377.714 73314.04 0.56382 0.00038896 0.06397 4.4131E-05 0.62779 0.00043309 689.864607024538 694.372524550897 97.756 0.59805 97.756 97.493 98.091 0 123 41 6 0 0 0 0.00021065 1 55055 80.916 75.696 1 1.0724 0.84812 0 5099500 2324000 2775500 8304 1053;1268 3153 3233 12994 12994 ELALQSFDTVQK 12 1 0 Unmodified _ELALQSFDTVQK_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.8709 2 689.864274 1377.714 73492.09 0.4367 0.00030127 0.084417 5.8236E-05 0.52112 0.0003595 689.8645336381 693.871761291574 97.607 0.58477 97.607 97.392 97.977 0 108 33 5 0 0 0 0.00087998 2 54167 64.439 64.439 1 1.2087 0.94552 0 3720600 1730200 1990400 8305 1053;1268 3153 3233 12995;12996 12996 ELALQTLK 8 1 0 Unmodified _ELALQTLK_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2791 2 458.279118 914.543683 90364.33 0.14132 6.4764E-05 -0.037401 -1.714E-05 0.10392 4.7624E-05 458.279006491663 462.286174440958 66.107 0.7466 66.107 65.759 66.505 0 323 67 6 0 0 0 0.0054876 2 38082 90.308 10.026 1 1.0002 1.0849 0 45121000 23243000 21877000 8306 1933 3154 3234 12997;12998 12998 ELALQTLK 8 1 0 Unmodified _ELALQTLK_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.279 2 458.279118 914.543683 90790.63 0.081283 3.725E-05 -0.16989 -7.7858E-05 -0.088609 -4.0608E-05 458.278972920943 462.28616224382 64.884 1.0245 64.884 64.299 65.324 0 349 88 7 0 0 0 0.0040438 2 38157 94.874 9.0666 1 0.98937 1.098 0 48668000 25532000 23136000 8307 1933 3154 3234 12999;13000 13000 ELALQTLK 8 1 0 Unmodified _ELALQTLK_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 462.2861 2 458.279118 914.543683 89732.16 0.30534 0.00013993 -0.47591 -0.0002181 -0.17057 -7.8167E-05 458.278893606366 462.286028928108 75.48 0.99211 75.48 75.097 76.09 0 345 70 7 0 0 0 0.013762 2 40068 64.567 8.0203 1 1.3482 1.0796 0 8546100 3854000 4692100 8308 1933 3154 3234 13001;13002 13001 ELALQTLK 8 1 0 Unmodified _ELALQTLK_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 462.2862 2 458.279118 914.543683 89095.24 -0.057307 -2.6263E-05 -0.17521 -8.0296E-05 -0.23252 -0.00010656 458.279064595698 462.286158105433 75.713 1.0162 75.713 75.374 76.391 0 334 70 7 0 0 0 0.011932 2 39424 68.787 6.7232 1 1.4812 1.211 0 8272100 3168500 5103500 8309 1933 3154 3234 13003;13004 13003 ELALSALLK 9 1 0 Unmodified _ELALSALLK_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.31 2 479.302593 956.590633 88453.04 0.57096 0.00027366 0.22078 0.00010582 0.79175 0.00037949 479.302572011758 483.309678690712 110.41 0.62177 110.41 110.03 110.65 0 148 44 5 0 0 0 0.0034059 2 69210 71.877 25.862 1 0.84205 0.91677 0 49196000 27863000 21334000 8310 2007 3155 3235 13005;13006 13005 ELALSALLK 9 1 0 Unmodified _ELALSALLK_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.3027 2 479.302593 956.590633 88550.03 0.25752 0.00012343 0.0625 2.9957E-05 0.32002 0.00015339 479.302559492703 483.309606166029 109.66 0.54886 109.66 109.39 109.94 0 166 37 6 0 0 0 0.0043049 1 70366 69.598 37.243 1 0.98048 1.0377 0 20236000 9905800 10330000 8311 2007 3155 3235 13007 13007 ELALSALLK 9 1 0 Unmodified _ELALSALLK_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.3099 2 479.302593 956.590633 88746.25 0.42807 0.00020518 -0.30433 -0.00014587 0.12375 5.9312E-05 479.302428202068 483.309439318122 121.81 0.45477 121.81 121.56 122.02 7.6294E-06 100 23 6 0 0 0 0.050555 1 72483 37.812 10.674 1 1.0726 0.85069 0 4581800 2116300 2465500 8312 2007 3155 3235 13008 13008 ELALSALLK 9 1 0 Unmodified _ELALSALLK_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 479.3026 2 479.302593 956.590633 87631.2 0.5602 0.0002685 -0.23662 -0.00011341 0.32358 0.00015509 479.302393828693 483.30947826677 121.55 0.50528 121.55 121.33 121.83 7.6294E-06 113 27 6 0 0 0 0.029116 1 71429 46.39 15.886 1 0.93026 0.75222 0 4346000 2099500 2246600 8313 2007 3155 3235 13009 13009 ELAMPGEDLK 10 1 0 Oxidation (M) _ELAM(ox)PGEDLK_ ELAM(1)PGEDLK ELAM(66.27)PGEDLK 0 1 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.7802 2 559.773539 1117.53253 80373.15 0.74156 0.00041511 -0.63724 -0.00035671 0.10432 5.8397E-05 559.77314857084 563.780116630291 41.024 0.70164 41.024 40.631 41.332 0 228 58 6 0 0 0 0.0014802 2 21410 66.27 52.691 1 2.4169 2.6084 0 41896000 14455000 27441000 8314 1580 3156 3236 13010;13011 13011 1358 ELAMQTFGVLK 11 1 0 Oxidation (M) _ELAM(ox)QTFGVLK_ ELAM(1)QTFGVLK ELAM(118.26)QTFGVLK 0 1 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.8414 2 626.833931 1251.65331 75440.19 0.78913 0.00049465 -0.29424 -0.00018444 0.49489 0.00031022 626.833333084535 630.840937341421 82.346 1.0387 82.346 81.709 82.748 7.6294E-06 345 88 7 0 0 0 2.1744E-08 2 48895 118.26 101.49 1 1.7392 1.9668 0 85210000 18986000 66224000 8315 303 3157 3237 13012;13013 13013 219 ELAMQTFGVLK 11 1 0 Oxidation (M) _ELAM(ox)QTFGVLK_ ELAM(1)QTFGVLK ELAM(118.26)QTFGVLK 0 1 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8416 2 626.833931 1251.65331 NaN NaN NaN 0.046102 2.8898E-05 NaN NaN NaN NaN 81.381 1.1702 81.381 80.688 81.859 0 0 0 0 1.102E-10 1 49369 118.26 95.434 1 NaN NaN 0 78428000 0 78428000 8316 303 3157 3237 13014 13014 219 ELAMQTFGVLK 11 1 0 Oxidation (M) _ELAM(ox)QTFGVLK_ ELAM(1)QTFGVLK ELAM(77.68)QTFGVLK 0 1 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8346 2 626.833931 1251.65331 70825.41 0.60704 0.00038052 -0.84045 -0.00052682 -0.23341 -0.00014631 626.833874366949 631.343284941303 93.631 0.65704 93.631 93.219 93.876 0 163 44 6 0 0 0 0.00021725 1 52349 77.677 65.452 1 0.63089 0.49713 0 5619900 3781500 1838500 8317 303 3157 3237 13015 13015 219 ELAMQTFGVLK 11 1 0 Oxidation (M) _ELAM(ox)QTFGVLK_ ELAM(1)QTFGVLK ELAM(77.68)QTFGVLK 0 1 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.8415 2 626.833931 1251.65331 75842.16 0.62275 0.00039036 -0.23825 -0.00014934 0.3845 0.00024102 626.83330407019 630.84114619048 93.987 0.52393 93.987 93.819 94.343 0 133 33 7 0 0 0 0.00021725 1 52601 77.677 65.452 1 1.4022 1.1121 0 10244000 4638400 5605200 8318 303 3157 3237 13016 13016 219 ELAMQTFGVLK 11 1 0 Oxidation (M) _ELAM(ox)QTFGVLK_ ELAM(1)QTFGVLK ELAM(90.63)QTFGVLK 0 1 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.834 2 626.833931 1251.65331 74365.02 0.56856 0.00035639 -1.1592 -0.00072664 -0.59067 -0.00037025 626.833685342382 630.841017978497 93.533 0.82423 93.533 93.126 93.95 0 217 55 7 0 0 0 0.00012122 1 51419 90.629 77.05 1 1.0632 0.8655 0 7265700 3360100 3905600 8319 303 3157 3237 13017 13017 219 ELAMQTFGVLK 11 1 0 Unmodified _ELAMQTFGVLK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.844 2 618.836474 1235.65839 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.51 1 114.51 114.01 115.01 0 0 0 0 1.2185E-06 1 66919 104.2 65.238 1 8320 303 3157 3238 13018 13018 ELAMQTFGVLK 11 1 0 Unmodified _ELAMQTFGVLK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.8384 2 618.836474 1235.65839 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.33 1 114.33 113.83 114.83 0 0 0 0 0.019486 1 65864 53.751 27.367 1 8321 303 3157 3238 13019 13019 ELAPYDENWFYTR 13 0 1 Unmodified _ELAPYDENWFYTR_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.8939 2 852.388645 1702.76274 66608.95 0.78793 0.00067162 -0.015328 -1.3065E-05 0.7726 0.00065856 852.388542425436 857.392595015482 106.94 0.92715 106.94 106.59 107.52 0 396 71 9 0 0 0 0.00013619 2 66278 80.979 55.543 1 0.97244 1.0818 0 76932000 39412000 37520000 8322 811 3158 3239 13020;13021 13020 ELAPYDENWFYTR 13 0 1 Unmodified _ELAPYDENWFYTR_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.3925 2 852.388645 1702.76274 65911.28 0.93739 0.00079902 -0.21271 -0.00018132 0.72468 0.00061771 852.388427112885 857.392480865682 106.3 0.8019 106.3 105.95 106.75 7.6294E-06 389 62 8 0 0 0 0.0001215 2 67439 77.305 54.619 1 0.95739 1.0973 0 83034000 39627000 43407000 8323 811 3158 3239 13022;13023 13022 ELAPYDENWFYTR 13 0 1 Unmodified _ELAPYDENWFYTR_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 857.9037 2 852.388645 1702.76274 65314.31 0.92951 0.0007923 0.2179 0.00018574 1.1474 0.00097804 852.388578313879 857.392826271636 117.83 0.63228 117.83 117.6 118.24 0 153 26 8 0 0 0 0.00011507 2 69411 75.695 51.844 1 1.1862 0.99221 0 10300000 4432000 5867900 8324 811 3158 3239 13024;13025 13024 ELAPYDENWFYTR 13 0 1 Unmodified _ELAPYDENWFYTR_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 852.3892 2 852.388645 1702.76274 65901.03 0.55596 0.00047389 0.85074 0.00072516 1.4067 0.001199 852.388875344754 857.393146358054 117.73 0.57401 117.73 117.44 118.02 0 156 27 8 0 0 0 0.0062995 2 68479 46.352 39.969 1 1.1615 0.95635 0 8451400 4053600 4397700 8325 811 3158 3239 13026;13027 13027 ELAQIAGRPTEDEDEK 16 1 1 Unmodified _ELAQIAGRPTEDEDEK_ 0 0 1 B4DDC8;B3KXL8;Q6IAU5;B2R665;O15355 B4DDC8 B4DDC8 PPM1G Protein phosphatase 1G ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 909.9457 2 900.934145 1799.85374 NaN NaN NaN -0.21152 -0.00019057 NaN NaN NaN NaN 35.632 0.16907 35.632 35.593 35.762 0 0 0 0 0.0018112 1 18227 74.46 44.525 1 NaN NaN 0 3965800 0 3965800 8326 839 3159 3240 13028 13028 ELAQQIEEETIK 12 1 0 Unmodified _ELAQQIEEETIK_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.8795 2 715.872296 1429.73004 71028.97 0.53818 0.00038527 1.047 0.00074953 1.5852 0.0011348 715.873597718287 719.879760257995 77.078 0.51463 77.078 76.871 77.386 0 176 41 6 0 0 0 1.9919E-29 1 46559 169.93 169.93 1 1.1785 1.2443 0 35459000 15928000 19531000 8327 63 3160 3241 13029 13029 ELAQQIQK 8 1 0 Unmodified _ELAQQIQK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;J3KSN7;D3DSD6 A8K7F6 A8K7F6 EIF4A1;EIF4A2;hCG_1793424 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.2722 2 479.271824 956.529095 87565.68 -0.13015 -6.2376E-05 0.014731 7.0599E-06 -0.11542 -5.5316E-05 479.271993783264 483.278947371968 24.626 0.55178 24.626 24.364 24.916 0 94 23 9 0 0 0 0.00098913 2 10359 119.56 23.186 1 2.2738 2.5664 0 109730000 36778000 72950000 8328 770 3161 3242 13030;13031 13031 ELAQQIQK 8 1 0 Unmodified _ELAQQIQK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;J3KSN7;D3DSD6 A8K7F6 A8K7F6 EIF4A1;EIF4A2;hCG_1793424 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 957.9015 1 957.536372 956.529095 62312.97 0.13127 0.00012569 0.38871 0.0003722 0.51997 0.00049789 957.535903665913 965.551114411085 24.632 0.33354 24.632 24.479 24.813 0 39 13 6 0 0 0 0.0050299 1 10323 120.46 44.719 1 1.7869 1.7694 0 19261000 6731700 12529000 8329 770 3161 3242 13032 13032 ELAQQIQK 8 1 0 Unmodified _ELAQQIQK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;J3KSN7;D3DSD6 A8K7F6 A8K7F6 EIF4A1;EIF4A2;hCG_1793424 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.279 2 479.271824 956.529095 86303.54 0.018541 8.8861E-06 -1.3449 -0.00064456 -1.3263 -0.00063567 479.77241785349 483.27887658365 24.396 0.47888 24.396 24.196 24.675 0 114 21 9 0 0 0 0.00090641 1 10076 125.86 18.199 1 2.2568 2.5965 0 175860000 37662000 138200000 8330 770 3161 3242 13033 13033 ELAQQIQK 8 1 0 Unmodified _ELAQQIQK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;J3KSN7;D3DSD6 A8K7F6 A8K7F6 EIF4A1;EIF4A2;hCG_1793424 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2719 2 479.271824 956.529095 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.355 1 24.355 23.855 24.855 0 0 0 0 0.0020707 1 10100 101.21 15.852 1 8331 770 3161 3242 13034 13034 ELAQQIQK 8 1 0 Unmodified _ELAQQIQK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;J3KSN7;D3DSD6 A8K7F6 A8K7F6 EIF4A1;EIF4A2;hCG_1793424 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.2795 2 479.271824 956.529095 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.041 1 27.041 26.541 27.541 0 0 0 0 0.0050598 1 9893 86.512 14.797 1 8332 770 3161 3242 13035 13035 ELAQQVQQVAAEYCR 15 0 1 Unmodified _ELAQQVQQVAAEYCR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRZ1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.4415 2 896.935967 1791.85738 63270.98 0.70204 0.00062969 -0.12541 -0.00011249 0.57663 0.0005172 897.436873408438 901.940244721428 88.95 0.66483 88.95 88.621 89.286 0 261 50 9 0 0 0 3.9815E-15 3 53504 128.68 128.68 1 1.3233 1.4681 0 67825000 27089000 40735000 8333 1009 3162 3243 13036;13037;13038 13037 ELAQQVQQVAAEYCR 15 0 1 Unmodified _ELAQQVQQVAAEYCR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRZ1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.9418 2 896.935967 1791.85738 64510.42 0.65655 0.00058888 -0.077247 -6.9286E-05 0.5793 0.0005196 896.935517114391 901.940162567092 87.973 0.6017 87.973 87.783 88.384 0 238 51 6 0 0 0 3.3718E-58 4 54167 194.39 179.35 1 1.2502 1.445 0 56182000 27483000 28699000 8334 1009 3162 3243 13039;13040;13041;13042 13040 ELAQQVQQVAAEYCR 15 0 1 Unmodified _ELAQQVQQVAAEYCR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRZ1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.9338 2 896.935967 1791.85738 63588.18 0.38716 0.00034725 0.25657 0.00023012 0.64372 0.00057738 896.935867941243 901.940255316517 102.6 0.65379 102.6 102.26 102.92 0 279 45 9 0 0 0 0.010877 1 58084 34.75 32.693 1 0.92164 0.75611 0 12305000 7185800 5119400 8335 1009 3162 3243 13043 13043 ELAQQVQQVAAEYCR 15 0 1 Unmodified _ELAQQVQQVAAEYCR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRZ1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 896.9365 2 896.935967 1791.85738 63352.66 0.07362 6.6032E-05 0.28322 0.00025403 0.35684 0.00032006 897.436995388204 901.940876829967 102.59 0.56657 102.59 102.28 102.85 7.6294E-06 219 38 8 0 0 0 0.00022369 3 57251 69.451 69.451 1 0.86743 0.72283 0 15820000 8222000 7598300 8336 1009 3162 3243 13044;13045;13046 13045 ELAQQVQQVADDYGK 15 1 0 Unmodified _ELAQQVQQVADDYGK_ 0 0 0 Q59F66;Q92841;B4DZQ7 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.9235 2 846.415391 1690.81623 65448 0.89016 0.00075344 -0.25264 -0.00021384 0.63752 0.0005396 846.415286652856 850.422488159618 79.934 0.64542 79.934 79.615 80.26 0 269 50 7 0 0 0 1.7273E-30 2 48479 155.48 155.48 1 1.405 1.4899 0 35946000 16725000 19221000 8337 1801 3163 3244 13047;13048 13047 ELAQQVQQVADDYGK 15 1 0 Unmodified _ELAQQVQQVADDYGK_ 0 0 0 Q59F66;Q92841;B4DZQ7 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 846.416 2 846.415391 1690.81623 66386.38 0.70077 0.00059314 -0.26919 -0.00022784 0.43158 0.0003653 846.415508583556 850.421503686782 93.289 0.96356 93.289 93.058 94.021 0 210 62 7 0 0 0 2.2135E-15 2 52011 132.79 132.79 1 0.88461 0.7029 0 10057000 4923000 5134400 8338 1801 3163 3244 13049;13050 13050 ELAQQVQQVADDYGK 15 1 0 Unmodified _ELAQQVQQVADDYGK_ 0 0 0 Q59F66;Q92841;B4DZQ7 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 846.9161 2 846.415391 1690.81623 66402.65 0.51912 0.00043939 -0.82744 -0.00070036 -0.30832 -0.00026097 846.414662620645 850.42182260156 93.353 0.64758 93.353 93.074 93.721 0 237 41 9 0 0 0 4.8022E-15 2 51208 126.76 116.81 1 0.91907 0.75562 0 9898900 5091800 4807100 8339 1801 3163 3244 13051;13052 13052 ELAQQVTPGDIVSTYGVR 18 0 1 Unmodified _ELAQQVTPGDIVSTYGVR_ 0 0 0 Q9NPI1;I3L4V5;A0A024R6Q8 Q9NPI1 Q9NPI1 BRD7 Bromodomain-containing protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 972.5154 2 967.004904 1931.99526 66890.48 0.48303 0.00046709 0.68865 0.00066593 1.1717 0.001133 967.506638767906 972.512238075664 100.98 0.51539 100.98 100.79 101.3 0 88 38 5 0 0 0 0.011729 1 61989 27.862 27.862 1 0.70134 0.7129 0 7392000 3786900 3605100 8340 2057 3164 3245 13053 13053 ELAQQVTPGDIVSTYGVR 18 0 1 Unmodified _ELAQQVTPGDIVSTYGVR_ 0 0 0 Q9NPI1;I3L4V5;A0A024R6Q8 Q9NPI1 Q9NPI1 BRD7 Bromodomain-containing protein 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 967.0043 2 967.004904 1931.99526 NaN NaN NaN -0.11872 -0.0001148 NaN NaN NaN NaN 100.41 0.36069 100.41 100.21 100.57 0 0 0 0 0.046017 1 62997 29.937 17.17 1 NaN NaN 0 5034200 5034200 0 8341 2057 3164 3245 13054 13054 ELAQQVTPGDIVSTYGVR 18 0 1 Unmodified _ELAQQVTPGDIVSTYGVR_ 0 0 0 Q9NPI1;I3L4V5;A0A024R6Q8 Q9NPI1 Q9NPI1 BRD7 Bromodomain-containing protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 972.5131 2 967.004904 1931.99526 64554.43 0.35398 0.0003423 0.4208 0.00040691 0.77477 0.00074921 967.506567864613 972.009283642965 113.24 0.3673 113.24 113.09 113.46 0 70 19 6 0 0 0 0.015162 1 65941 24.935 24.935 1 1.4712 1.2762 0 2450600 1051600 1399000 8342 2057 3164 3245 13055 13055 ELASCNPVVLEESK 14 1 0 Unmodified _ELASCNPVVLEESK_ 0 0 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.8962 2 787.890163 1573.76577 69093.89 0.74284 0.00058528 0.071405 5.6259E-05 0.81424 0.00064153 787.889622158617 791.897747985176 70.795 1.1413 70.795 70.12 71.261 0 371 93 6 0 0 0 3.7325E-05 3 41006 95.018 77.582 1 1.2253 1.2042 0 23427000 9939600 13488000 8343 2121 3165 3246 13056;13057;13058 13057 ELASCNPVVLEESK 14 1 0 Unmodified _ELASCNPVVLEESK_ 0 0 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.8975 2 787.890163 1573.76577 68983.91 0.61049 0.000481 -0.52696 -0.00041518 0.083535 6.5816E-05 787.889228584197 791.897246432741 69.668 1.0056 69.668 69.261 70.266 0 325 83 6 0 0 0 8.2133E-05 2 41362 88.187 88.187 1 1.2102 1.2434 0 32205000 14520000 17685000 8344 2121 3165 3246 13059;13060 13060 ELASCNPVVLEESK 14 1 0 Unmodified _ELASCNPVVLEESK_ 0 0 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.8988 2 787.890163 1573.76577 68329.72 0.50016 0.00039407 -0.0010072 -7.9355E-07 0.49915 0.00039327 787.889874991021 791.897333143468 80.915 0.92056 80.915 80.5 81.421 0 305 60 9 0 0 0 0.0053056 2 43585 43.991 43.991 1 1.4597 1.1363 0 15580000 6282800 9296800 8345 2121 3165 3246 13061;13062 13061 ELASCNPVVLEESK 14 1 0 Unmodified _ELASCNPVVLEESK_ 0 0 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.8974 2 787.890163 1573.76577 68274.72 0.76488 0.00060264 -0.62637 -0.00049351 0.13852 0.00010913 787.888884385455 791.897085193315 81.144 0.99679 81.144 80.757 81.753 0 289 58 8 0 0 0 0.0019255 3 42890 50.207 50.207 1 1.6226 1.3054 0 13838000 5757800 8079800 8346 2121 3165 3246 13063;13064;13065 13063 ELASGEYFLK 10 1 0 Unmodified _ELASGEYFLK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.7981 2 578.797872 1155.58119 78873.9 0.61704 0.00035714 -0.30767 -0.00017808 0.30937 0.00017906 578.797147666983 582.804895355531 79.893 1.1129 79.893 79.438 80.551 0 365 95 6 0 0 0 8.4089E-06 2 47384 106.42 81.5 1 0.99809 1.0931 0 52283000 27061000 25222000 8347 1717 3166 3247 13066;13067 13067 ELASGEYFLK 10 1 0 Unmodified _ELASGEYFLK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.798 2 578.797872 1155.58119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.779 1 78.779 78.279 79.279 0 0 0 0 3.4042E-05 1 47810 90.657 46.21 1 8348 1717 3166 3247 13068 13068 ELASGEYFLK 10 1 0 Unmodified _ELASGEYFLK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.8051 2 578.797872 1155.58119 79760.37 0.73417 0.00042494 -0.13356 -7.7305E-05 0.60061 0.00034763 578.797637551759 582.804898103014 91.157 0.90948 91.157 90.685 91.595 0 269 59 7 0 0 0 0.00051211 2 50476 85.67 65.15 1 1.1977 0.94527 0 10754000 4954000 5800400 8349 1717 3166 3247 13069;13070 13069 ELASGEYFLK 10 1 0 Unmodified _ELASGEYFLK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.8055 2 578.797872 1155.58119 79562.4 0.39609 0.00022926 0.014004 8.1053E-06 0.4101 0.00023736 578.7977580065 582.804967679784 91.062 0.78085 91.062 90.689 91.47 0 232 49 6 0 0 0 0.0048813 2 49600 60.91 45.568 1 1.2092 0.99348 0 9573500 4091600 5482000 8350 1717 3166 3247 13071;13072 13071 ELATNLNVGTSSSAASSLK 19 1 0 Unmodified _ELATNLNVGTSSSAASSLK_ 0 0 0 A0A0S2Q0B1;O14497;H0Y488;A0A1B0GTU5;A0A087WUV6;Q96TA9;Q4LE49;A0A1B0GV63;A0A1B0GWJ2;A0A1B0GTJ8;A0A1B0GVK1;H0Y7H8;Q8NFD5;H0Y3S9;H0Y2R3 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1A variant protein;ARID1B AT-rich interactive domain-containing protein 1A;AT-rich interactive domain-containing protein 1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.9828 2 925.478719 1848.94289 65830.02 0.54092 0.00050061 0.57455 0.00053174 1.1155 0.0010323 925.981404928156 929.485763636775 77.465 0.34365 77.465 77.29 77.634 0 87 27 4 0 0 0 1.1811E-06 2 45748 85.837 85.837 1 0.9042 0.92994 0 10720000 6018700 4701400 8351 544 3167 3248 13073;13074 13073 ELAVQIYEEAR 11 0 1 Unmodified _ELAVQIYEEAR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.8472 2 660.843342 1319.67213 NaN NaN NaN -0.14149 -9.3503E-05 NaN NaN NaN NaN 81.884 0.7664 81.884 81.687 82.453 -7.6294E-06 0 0 0 5.3777E-12 1 48994 125.97 89.412 1 NaN NaN 0 39893000 0 39893000 8352 522 3168 3249 13075 13075 ELAYQTFEVLR 11 0 1 Unmodified _ELAYQTFEVLR_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8672 2 684.861534 1367.70852 73442.98 0.69849 0.00047837 -0.097415 -6.6716E-05 0.60107 0.00041165 684.8615508586 689.865467681923 103.58 0.54987 103.58 103.39 103.94 -7.6294E-06 129 44 4 0 0 0 7.642E-08 2 63907 113.22 93.433 1 0.83062 0.8406 0 9735800 5553400 4182500 8353 1708 3169 3250 13076;13077 13076 ELAYQTFEVLR 11 0 1 Unmodified _ELAYQTFEVLR_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8662 2 684.861534 1367.70852 73838.89 0.75604 0.00051778 -0.070069 -4.7987E-05 0.68597 0.0004698 684.861229238508 689.865832040854 102.93 0.56868 102.93 102.6 103.17 7.6294E-06 154 45 5 0 0 0 3.3407E-05 2 65064 100.02 84.136 1 0.93369 0.9176 0 14254000 6506300 7747600 8354 1708 3169 3250 13078;13079 13079 ELCQGLGQPGSVLR 14 0 1 Unmodified _ELCQGLGQPGSVLR_ 0 0 0 A0A024RC87;A0A140VJT8;P13489;H0YCR7 A0A024RC87 A0A024RC87 RNH1 Ribonuclease inhibitor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.3993 2 757.393207 1512.77186 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.338 1 76.338 75.838 76.838 0 0 0 0 0.014348 1 44988 48.004 28.217 1 8355 355 3170 3251 13080 13080 ELCQGLGQPGSVLR 14 0 1 Unmodified _ELCQGLGQPGSVLR_ 0 0 0 A0A024RC87;A0A140VJT8;P13489;H0YCR7 A0A024RC87 A0A024RC87 RNH1 Ribonuclease inhibitor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.3955 2 757.393207 1512.77186 NaN NaN NaN -0.25181 -0.00019072 NaN NaN NaN NaN 75.503 0.31238 75.503 75.343 75.656 0 0 0 0 0.029722 1 45403 41.704 26.553 1 NaN NaN 0 5233900 0 5233900 8356 355 3170 3251 13081 13081 ELDALDANDELTPLGR 16 0 1 Unmodified _ELDALDANDELTPLGR_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.4342 2 871.43378 1740.85301 63681.95 0.73484 0.00064036 -0.42217 -0.00036789 0.31267 0.00027247 871.433976605936 876.437578926716 104.48 1.2153 104.48 103.94 105.16 -7.6294E-06 833 99 11 0 0 0 2.6425E-18 2 64383 136.7 136.7 1 1.2797 1.5088 0 242620000 108740000 133880000 8357 1691 3171 3252 13082;13083 13083 ELDALDANDELTPLGR 16 0 1 Unmodified _ELDALDANDELTPLGR_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 876.4382 2 871.43378 1740.85301 63774.9 0.42123 0.00036707 -0.42269 -0.00036835 -0.0014627 -1.2747E-06 871.935458779097 876.437742907262 103.8 1.2826 103.8 103.34 104.62 0 768 106 11 0 0 0 1.3612E-56 2 65502 178.1 178.1 1 1.5178 1.7585 0 289110000 127630000 161480000 8358 1691 3171 3252 13084;13085 13084 ELDALDANDELTPLGR 16 0 1 Unmodified _ELDALDANDELTPLGR_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 871.4352 2 871.43378 1740.85301 64770.29 0.93671 0.00081628 0.5392 0.00046988 1.4759 0.0012862 871.43407864019 876.438408776857 115.81 1.3833 115.81 115.51 116.9 0 251 58 10 0 0 0 1.1945E-44 3 67931 168.98 151.55 1 1.4507 1.2483 0 51441000 22030000 29411000 8359 1691 3171 3252 13086;13087;13088 13087 ELDALDANDELTPLGR 16 0 1 Unmodified _ELDALDANDELTPLGR_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 871.9368 2 871.43378 1740.85301 64935.52 0.55307 0.00048196 -0.47027 -0.00040981 0.082802 7.2157E-05 871.433989161903 876.437889800398 115.88 1.6101 115.88 115.47 117.08 0 445 74 11 0 0 0 1.2476E-33 3 66916 153.38 153.38 1 1.4467 1.2619 0 37255000 15606000 21649000 8360 1691 3171 3252 13089;13090;13091 13090 ELDATATVLANR 12 0 1 Unmodified _ELDATATVLANR_ 0 0 0 P39880;B4DMN0;A0A097ZMP4;A0A097ZMP6;Q13948 P39880 P39880 CUX1;CUX1-RETc;CUX1-RETa Homeobox protein cut-like 1;Protein CASP MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.8448 2 637.340966 1272.66738 79226.63 0.43218 0.00027545 0.26549 0.00016921 0.69767 0.00044465 637.341138324623 642.345410958532 79.885 0.52559 79.885 79.639 80.165 0 84 31 4 0 0 0 0.014861 1 43039 43.297 33.065 1 1.5095 1.3399 0 1281700 511870 769790 8361 1556 3172 3253 13092 13092 ELDATATVLANR 12 0 1 Unmodified _ELDATATVLANR_ 0 0 0 P39880;B4DMN0;A0A097ZMP4;A0A097ZMP6;Q13948 P39880 P39880 CUX1;CUX1-RETc;CUX1-RETa Homeobox protein cut-like 1;Protein CASP MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.3459 2 637.340966 1272.66738 79453.58 0.50382 0.0003211 0.07082 4.5136E-05 0.57463 0.00036624 637.341209972499 642.345264657814 80.137 0.452 80.137 79.967 80.419 0 69 25 4 0 0 0 0.018838 1 42416 40.496 30.265 1 1.6789 1.4611 0 1255700 572620 683050 8362 1556 3172 3253 13093 13093 ELDDATEANEGLSR 14 0 1 Unmodified _ELDDATEANEGLSR_ 0 0 0 P35580 P35580 P35580 MYH10 Myosin-10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.3517 2 760.347174 1518.67979 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.93 1 42.93 42.43 43.43 0 0 0 0 0.00037102 1 22904 85.288 70.023 1 8363 1544 3173 3254 13094 13094 ELDEEGSDPPLPGR 14 0 1 Unmodified _ELDEEGSDPPLPGR_ 0 0 0 C9JQV0;Q9BRJ6;A0A024R836;H7C0T1;H7C2R9 C9JQV0 C9JQV0 C7orf50;MGC11257 Uncharacterized protein C7orf50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 755.854 2 755.854635 1509.69472 73196.99 0.56255 0.00042521 0.049832 3.7666E-05 0.61239 0.00046288 755.854506228196 760.858547339239 69.446 0.43723 69.446 69.227 69.664 0 78 29 4 0 0 0 0.062775 1 35653 23.754 23.754 1 0.44825 0.39008 0 1532500 940330 592220 8364 1141 3174 3255 13095 13095 ELDEHELDYDEEVPEEPAPAVQEDEAEK 28 1 0 Unmodified _ELDEHELDYDEEVPEEPAPAVQEDEAEK_ 0 0 0 E7ERS3;B4DTK7;Q86VM9 E7ERS3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1088.1443 3 1085.47216 3253.39464 59155.05 0.37774 0.00041003 0.0030664 3.3285E-06 0.38081 0.00041336 1085.80640789351 1088.47744801034 86.343 0.43283 86.343 86.125 86.557 0 164 32 7 0 0 0 2.7127E-07 4 51912 47.018 47.018 1 1.2149 1.2738 0 16590000 7177800 9411700 8365 1033 3175 3256 13096;13097;13098;13099 13097 ELDEHELDYDEEVPEEPAPAVQEDEAEK 28 1 0 Unmodified _ELDEHELDYDEEVPEEPAPAVQEDEAEK_ 0 0 0 E7ERS3;B4DTK7;Q86VM9 E7ERS3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1088.4767 3 1085.47216 3253.39464 59634.74 0.47477 0.00051535 -0.31664 -0.00034371 0.15813 0.00017165 1085.80561547877 1088.47678403702 85.79 0.35602 85.79 85.526 85.882 0 111 25 7 0 0 0 1.8953E-10 3 52805 50.505 50.46 1 1.1411 1.1963 0 19500000 12259000 7241300 8366 1033 3175 3256 13100;13101;13102 13102 ELDELLNCLHPQGIR 15 0 1 Unmodified _ELDELLNCLHPQGIR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.6477 3 602.977082 1805.90942 NaN NaN NaN -0.57269 -0.00034532 NaN NaN NaN NaN 104.17 0.70815 104.17 103.97 104.68 0 0 0 0 1.7816E-05 1 64405 80.96 57.503 1 NaN NaN 0 12737000 0 12737000 8367 2103 3176 3257 13103 13103 ELDELLNCLHPQGIR 15 0 1 Unmodified _ELDELLNCLHPQGIR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.3138 3 602.977082 1805.90942 NaN NaN NaN -0.22476 -0.00013553 NaN NaN NaN NaN 103.38 0.76809 103.38 103.11 103.88 0 0 0 0 8.7268E-11 1 65396 107.14 83.72 1 NaN NaN 0 21191000 0 21191000 8368 2103 3176 3257 13104 13104 ELDELLNCLHPQGIR 15 0 1 Unmodified _ELDELLNCLHPQGIR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 908.9657 2 903.961985 1805.90942 NaN NaN NaN 0.5111 0.00046201 NaN NaN NaN NaN 115.36 0.7585 115.36 115.12 115.88 0 0 0 0 0.037474 1 67492 39.179 31.075 1 NaN NaN 0 8344400 0 8344400 8369 2103 3176 3257 13105 13105 ELDELLNCLHPQGIR 15 0 1 Unmodified _ELDELLNCLHPQGIR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.3138 3 602.977082 1805.90942 NaN NaN NaN 0.14877 8.9703E-05 NaN NaN NaN NaN 115.36 0.7585 115.36 115.12 115.88 0 0 0 0 0.015117 1 67548 36.77 32.802 1 NaN NaN 0 16671000 0 16671000 8370 2103 3176 3257 13106 13106 ELDELLNCLHPQGIR 15 0 1 Unmodified _ELDELLNCLHPQGIR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 908.9677 2 903.961985 1805.90942 NaN NaN NaN 0.21223 0.00019185 NaN NaN NaN NaN 115.17 0.68945 115.17 114.99 115.68 0 0 0 0 5.6699E-07 1 66584 98.898 84.208 1 NaN NaN 0 10749000 0 10749000 8371 2103 3176 3257 13107 13107 ELDLSGQGFSEK 12 1 0 Unmodified _ELDLSGQGFSEK_ 0 0 0 Q71RB6;Q8N531 Q71RB6 Q71RB6 FBXL6 F-box/LRR-repeat protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.3184 2 655.317157 1308.61976 NaN NaN NaN 0.75745 0.00049637 NaN NaN NaN NaN 68.192 0.4225 68.192 68.044 68.467 7.6294E-06 0 0 0 3.0728E-13 1 40440 123.63 93.055 1 NaN NaN 0 11220000 11220000 0 8372 1867 3177 3258 13108 13108 ELDLSGQGFSEK 12 1 0 Unmodified _ELDLSGQGFSEK_ 0 0 0 Q71RB6;Q8N531 Q71RB6 Q71RB6 FBXL6 F-box/LRR-repeat protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.326 2 655.317157 1308.61976 77345.88 0.68718 0.00045032 1.0511 0.00068883 1.7383 0.0011391 655.317886109202 659.324911619952 79.115 0.42049 79.115 78.934 79.355 0 79 24 5 0 0 0 0.057368 1 42595 31.431 20.601 1 1.2306 1.0392 0 2092600 1015100 1077500 8373 1867 3177 3258 13109 13109 ELDQWIEQLNECK 13 1 0 Unmodified _ELDQWIEQLNECK_ 0 0 0 Q6I9T8;B3KUN1;P67775;E5RI56 Q6I9T8 Q6I9T8 PPP2CA Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.3989 2 852.898519 1703.78249 67704.11 0.83635 0.00071332 -0.041327 -3.5248E-05 0.79502 0.00067808 853.399461295739 856.906307122516 107.52 0.509 107.52 107.2 107.71 0 57 38 4 0 0 0 0.027279 1 67041 42.743 36.511 1 2.1704 2.1564 0 8094600 4003700 4090900 8374 948 3178 3259 13110 13110 ELDSITPEVLPGWK 14 1 0 Unmodified _ELDSITPEVLPGWK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.4192 2 792.419413 1582.82427 69220.23 0.92849 0.00073575 0.21288 0.00016869 1.1414 0.00090445 792.419830066897 796.42650223502 115 0.49359 115 114.81 115.3 7.6294E-06 116 31 5 0 0 0 1.9024E-14 3 73144 131.82 110.95 1 0.79654 0.78093 0 20694000 12043000 8651500 8375 1774;1029;1128 3179 3260 13111;13112;13113 13113 ELDSITPEVLPGWK 14 1 0 Unmodified _ELDSITPEVLPGWK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.4277 2 792.419413 1582.82427 69152.55 0.8291 0.00065699 -0.21392 -0.00016951 0.61518 0.00048748 792.419670270611 796.426484224555 114.54 0.4287 114.54 114.33 114.76 0 105 27 5 0 0 0 4.9936E-05 1 74447 93.096 81.876 1 0.81605 0.83941 0 17982000 9688500 8293800 8376 1774;1029;1128 3179 3260 13114 13114 ELDSITPEVLPGWK 14 1 0 Unmodified _ELDSITPEVLPGWK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.9207 2 792.419413 1582.82427 70148.77 1.0067 0.00079772 -0.015062 -1.1935E-05 0.99163 0.00078578 792.419551062898 796.426887324232 126.24 0.53687 126.24 125.94 126.47 7.6294E-06 116 20 9 0 0 0 0.0007398 2 75868 58.676 43.411 1 1.969 1.5409 0 3855600 1370200 2485300 8377 1774;1029;1128 3179 3260 13115;13116 13116 ELDSITPEVLPGWK 14 1 0 Unmodified _ELDSITPEVLPGWK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 796.4279 2 792.419413 1582.82427 69761.09 0.77588 0.00061482 0.30445 0.00024125 1.0803 0.00085607 792.419455005799 796.426736552394 126.1 0.52206 126.1 125.85 126.37 0 121 23 7 0 0 0 0.0077175 1 74822 39.917 33.064 1 2.1679 1.6987 0 3336300 1217000 2119200 8378 1774;1029;1128 3179 3260 13117 13117 ELDSQLNEPR 10 0 1 Unmodified _ELDSQLNEPR_ 0 0 0 P52948;H7C3P6 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.8008 2 600.796392 1199.57823 76702.38 0.60554 0.00036381 -0.2022 -0.00012148 0.40333 0.00024232 600.796160908304 605.800816042396 37.839 0.50779 37.839 37.538 38.046 0 133 41 5 0 0 0 1.5297E-05 2 19287 101.25 89.027 1 1.2741 1.3336 0 12767000 5815200 6951300 8379 1603 3180 3261 13118;13119 13118 ELDSQLNEPR 10 0 1 Unmodified _ELDSQLNEPR_ 0 0 0 P52948;H7C3P6 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.8014 2 600.796392 1199.57823 80269.61 0.75918 0.00045611 0.32977 0.00019812 1.089 0.00065424 600.796321344969 605.801070093094 36.97 0.45114 36.97 36.696 37.147 0 100 33 5 0 0 0 6.0556E-08 2 19083 113.71 100.13 1 1.4154 1.4204 0 19053000 8637700 10415000 8380 1603 3180 3261 13120;13121 13121 ELEAELEDERK 11 1 1 Unmodified _ELEAELEDERK_ 0 0 1 P35580 P35580 P35580 MYH10 Myosin-10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8438 2 680.833171 1359.65179 NaN NaN NaN -0.27178 -0.00018503 NaN NaN NaN NaN 36.211 0.13606 36.211 36.149 36.285 0 0 0 0 0.026807 1 18285 51.268 35.606 1 NaN NaN 0 2662400 0 2662400 8381 1544 3181 3262 13122 13122 ELEAENYHDIK 11 1 0 Unmodified _ELEAENYHDIK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.8319 2 680.822606 1359.63066 73632.59 0.69386 0.0004724 -0.054432 -3.7059E-05 0.63943 0.00043534 680.822168906945 684.829874451598 32.753 0.29124 32.753 32.611 32.902 0 89 25 5 0 0 0 1.9293E-05 2 16274 105.2 91.818 1 0.76538 0.77378 0 16399000 8092900 8306500 8382 415 3182 3263 13123;13124 13124 ELEAENYHDIK 11 1 0 Unmodified _ELEAENYHDIK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.8322 2 680.822606 1359.63066 NaN NaN NaN 1.0476 0.00071325 NaN NaN NaN NaN 38.704 0.25498 38.704 38.619 38.874 0 0 0 0 0.0019302 1 17602 79.489 54.97 1 NaN NaN 0 2118500 0 2118500 8383 415 3182 3263 13125 13125 ELEAENYHDIK 11 1 0 Unmodified _ELEAENYHDIK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.832 2 680.822606 1359.63066 NaN NaN NaN 0.93937 0.00063955 NaN NaN NaN NaN 38.9 0.26441 38.9 38.765 39.03 0 0 0 0 9.7985E-06 1 17216 104.42 71.161 1 NaN NaN 0 2469300 0 2469300 8384 415 3182 3263 13126 13126 ELEANVLATAPDK 13 1 0 Unmodified _ELEANVLATAPDK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.87 2 685.861731 1369.70891 NaN NaN NaN 0.36381 0.00024952 NaN NaN NaN NaN 72.593 1.0327 72.593 72.031 73.064 0 0 0 0 8.8406E-14 1 42298 119.34 101.35 1 NaN NaN 0 119260000 0 119260000 8385 2070 3183 3264 13127 13127 ELEANVLATAPDK 13 1 0 Unmodified _ELEANVLATAPDK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.869 2 685.861731 1369.70891 72354.27 0.31776 0.00021794 0.35233 0.00024165 0.67009 0.00045959 685.861855834027 689.868989065837 71.564 1.0699 71.564 70.941 72.011 0 488 82 9 0 0 0 6.6973E-07 4 42733 122.51 101.05 1 0.85371 0.99444 0 247950000 143560000 104390000 8386 2070 3183 3264 13128;13129;13130;13131 13129 ELEANVLATAPDK 13 1 0 Unmodified _ELEANVLATAPDK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.8693 2 685.861731 1369.70891 72097.51 0.47669 0.00032694 0.3219 0.00022078 0.79859 0.00054772 685.861994164 689.868985200039 82.881 1.2963 82.881 82.353 83.649 0 467 81 10 0 0 0 0.00024044 4 44939 68.536 58.304 1 1.8067 1.5497 0 79289000 29928000 49360000 8387 2070 3183 3264 13132;13133;13134;13135 13133 ELEANVLATAPDK 13 1 0 Unmodified _ELEANVLATAPDK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.8692 2 685.861731 1369.70891 72582.61 0.54082 0.00037093 0.096951 6.6495E-05 0.63777 0.00043742 685.861745824318 689.868789321108 83.063 1.0941 83.063 82.598 83.692 0 450 62 12 0 0 0 4.4222E-05 3 44221 97.214 78.902 1 1.8324 1.5543 0 66992000 25148000 41844000 8388 2070 3183 3264 13136;13137;13138 13136 ELEANVLATAPDKK 14 2 0 Unmodified _ELEANVLATAPDKK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.6191 3 500.275234 1497.80387 85592.85 0.36536 0.00018278 0.12666 6.3363E-05 0.49202 0.00024614 500.275397330526 505.617986198404 54.211 0.41035 54.211 54.01 54.421 0 152 33 6 0 0 0 0.0071006 1 30428 23.481 18.59 1 0.76621 0.90495 0 33489000 18167000 15322000 8389 2070 3184 3265 13139 13139 ELEANVLATAPDKK 14 2 0 Unmodified _ELEANVLATAPDKK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.6182 3 500.275234 1497.80387 86583.52 -0.19663 -9.8369E-05 0.61933 0.00030983 0.4227 0.00021147 500.275548570224 505.61819355447 53.049 0.45412 53.049 52.825 53.279 0 170 39 6 0 0 0 0.0021025 2 30258 35.037 30.857 1 0.82806 0.95186 0 24056000 13863000 10194000 8390 2070 3184 3265 13140;13141 13140 ELEANVLATAPDKK 14 2 0 Unmodified _ELEANVLATAPDKK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.6183 3 500.275234 1497.80387 85841.7 0.096116 4.8085E-05 0.074995 3.7518E-05 0.17111 8.5602E-05 500.2750826412 505.618011950983 63.022 0.54727 63.022 62.738 63.285 0 223 49 6 0 0 0 0.051016 1 32310 14.004 14.004 1 1.8144 1.5611 0 6388800 2261400 4127400 8391 2070 3184 3265 13142 13142 ELEANVLATAPDKK 14 2 0 Unmodified _ELEANVLATAPDKK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.9238 2 749.909213 1497.80387 71247.55 0.45298 0.00033969 -0.058673 -4.3999E-05 0.3943 0.00029569 749.908915023293 757.923482495874 62.997 0.44137 62.997 62.796 63.237 0 106 40 4 0 0 0 0.0020399 2 32343 55.261 40.289 1 1.9948 1.7264 0 3748700 1148400 2600300 8392 2070 3184 3265 13143;13144 13143 ELEANVLATAPDKK 14 2 0 Unmodified _ELEANVLATAPDKK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.9246 2 749.909213 1497.80387 70142.88 0.3362 0.00025212 0.024419 1.8312E-05 0.36062 0.00027043 749.90925570226 757.923624841422 63.457 0.49334 63.457 63.222 63.715 -3.8147E-06 148 45 5 0 0 0 0.0026199 2 31863 52.788 46.255 1 1.5587 1.3402 0 3573400 1454700 2118700 8393 2070 3184 3265 13145;13146 13145 ELEANVLATAPDKK 14 2 0 Unmodified _ELEANVLATAPDKK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.2753 3 500.275234 1497.80387 85995.39 -0.0070018 -3.5028E-06 0.026553 1.3284E-05 0.019552 9.7812E-06 500.275165707956 505.617983167938 63.442 0.56097 63.442 63.144 63.705 3.8147E-06 240 51 6 0 0 0 0.019887 1 31907 22.606 22.606 1 1.8294 1.5541 0 5869700 2171300 3698400 8394 2070 3184 3265 13147 13147 ELEDAQAGSGTIGR 14 0 1 Unmodified _ELEDAQAGSGTIGR_ 0 0 0 Q6TGM1;Q6TGM0;P33897 Q6TGM1 Q6TGM1 ALD;ABCD1 ATP-binding cassette sub-family D member 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3472 2 702.341694 1402.66884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.34 1 35.34 34.84 35.84 0 0 0 0 0.00011569 1 17761 92.19 64.016 1 8395 1538 3185 3266 13148 13148 ELEDAQAGSGTIGR 14 0 1 Unmodified _ELEDAQAGSGTIGR_ 0 0 0 Q6TGM1;Q6TGM0;P33897 Q6TGM1 Q6TGM1 ALD;ABCD1 ATP-binding cassette sub-family D member 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.3454 2 702.341694 1402.66884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.649 1 34.649 34.149 35.149 0 0 0 0 0.00057008 1 17561 81.625 51.371 1 8396 1538 3185 3266 13149 13149 ELEDATETADAMNR 14 0 1 Oxidation (M) _ELEDATETADAM(ox)NR_ ELEDATETADAM(1)NR ELEDATETADAM(201.56)NR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.3389 2 791.338491 1580.66243 67768.74 0.55956 0.0004428 -0.39009 -0.00030869 0.16947 0.00013411 791.338585880287 796.342281911757 29.037 0.63355 29.037 28.883 29.516 -1.9073E-06 212 41 9 0 0 0 6.4322E-70 3 13938 201.56 189.5 1 2.0279 2.3239 0 133240000 43432000 89805000 8397 81 3186 3267 13150;13151;13152 13152 55 ELEDATETADAMNR 14 0 1 Oxidation (M) _ELEDATETADAM(ox)NR_ ELEDATETADAM(1)NR ELEDATETADAM(85.81)NR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.8446 2 791.338491 1580.66243 NaN NaN NaN -0.47413 -0.0003752 NaN NaN NaN NaN 29.546 0.056223 29.546 29.495 29.551 0 0 0 0 5.7741E-05 1 14291 85.813 65.509 1 NaN NaN 0 1873300 0 1873300 8398 81 3186 3267 13153 13153 55 ELEDATETADAMNR 14 0 1 Oxidation (M) _ELEDATETADAM(ox)NR_ ELEDATETADAM(1)NR ELEDATETADAM(158.08)NR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.3426 2 791.338491 1580.66243 67492.16 0.51439 0.00040706 0.0081939 6.4842E-06 0.52258 0.00041354 791.338898003396 796.342487001927 28.729 0.7937 28.729 28.286 29.08 0 356 70 7 0 0 0 4.0378E-30 2 13589 158.08 149.86 1 2.1119 2.3296 0 41445000 12367000 29078000 8399 81 3186 3267 13154;13155 13154 55 ELEDATETADAMNR 14 0 1 Oxidation (M) _ELEDATETADAM(ox)NR_ ELEDATETADAM(1)NR ELEDATETADAM(43.5)NR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.8409 2 791.338491 1580.66243 68230.19 0.64858 0.00051324 0.29882 0.00023647 0.94739 0.00074971 791.339342570093 796.342793166868 34.058 0.74506 34.058 33.708 34.453 0 198 62 5 0 0 0 0.0027107 1 14533 43.502 40.882 1 1.8205 1.5366 0 4743000 1732900 3010100 8400 81 3186 3267 13156 13156 55 ELEDATETADAMNR 14 0 1 Unmodified _ELEDATETADAMNR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.3409 2 783.341034 1564.66752 67816.25 0.63619 0.00049835 -0.36623 -0.00028689 0.26995 0.00021147 783.340790643361 788.345140908044 56.461 0.63008 56.461 56.188 56.818 0 173 38 7 0 0 0 0.0015775 2 28464 52.693 52.693 1 3.1531 2.6658 0 4889400 1151600 3737800 8401 81 3186 3268 13157;13158 13158 ELEDATETADAMNR 14 0 1 Unmodified _ELEDATETADAMNR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.3458 2 783.341034 1564.66752 69787.65 0.70011 0.00054842 -0.398 -0.00031177 0.30211 0.00023665 783.341235625415 788.345111813789 57.244 0.62836 57.244 56.889 57.517 0 187 40 7 0 0 0 0.0019255 2 28228 50.207 47.795 1 3.0047 2.5497 0 3088900 571220 2517700 8402 81 3186 3268 13159;13160 13159 ELEDFEMKK 9 2 0 Oxidation (M) _ELEDFEM(ox)KK_ ELEDFEM(1)KK ELEDFEM(65.25)KK 0 1 1 A0A090N7X1;A0A090N7Y2;Q9UG63;C9JHK9;C9JZV3 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.793 2 592.778822 1183.54309 NaN NaN NaN 0.20439 0.00012116 NaN NaN NaN NaN 27.694 0.36964 27.694 27.553 27.923 0 0 0 0 0.0065759 1 12842 65.246 54.025 1 NaN NaN 0 10447000 0 10447000 8403 455 3187 3269 13161 13161 320 ELEDLEVDGQK 11 1 0 Unmodified _ELEDLEVDGQK_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8125 2 637.809165 1273.60378 74905.1 0.73735 0.00047029 0.26067 0.00016626 0.99802 0.00063655 637.809219023828 641.816395388517 55.777 0.59454 55.777 55.548 56.143 0 170 42 6 0 0 0 2.8015E-10 2 31328 133.57 71.574 1 1.2586 1.2365 0 23301000 11078000 12223000 8404 1694 3188 3270 13162;13163 13162 ELEDLEVDGQK 11 1 0 Unmodified _ELEDLEVDGQK_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.8174 2 637.809165 1273.60378 76010.62 0.48307 0.00030811 0.056068 3.5761E-05 0.53914 0.00034387 637.809111314113 641.816366177681 54.941 0.6647 54.941 54.684 55.349 3.8147E-06 247 52 6 0 0 0 3.6026E-08 1 31368 119.68 69.64 1 1.3133 1.3256 0 26870000 11173000 15697000 8405 1694 3188 3270 13164 13164 ELEDLEVDGQK 11 1 0 Unmodified _ELEDLEVDGQK_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.809 2 637.809165 1273.60378 76412.49 0.4772 0.00030436 -0.047017 -2.9988E-05 0.43018 0.00027437 637.809133695475 641.816306452453 64.598 0.61067 64.598 64.269 64.879 -7.6294E-06 165 41 6 0 0 0 0.00077159 2 33214 72.607 32.255 1 0.73478 0.58762 0 2900700 1623900 1276800 8406 1694 3188 3270 13165;13166 13165 ELEDLEVDGQK 11 1 0 Unmodified _ELEDLEVDGQK_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.8162 2 637.809165 1273.60378 76295.08 0.39339 0.00025091 0.10994 7.0121E-05 0.50333 0.00032103 637.809139023589 641.816527989129 65.205 0.77857 65.205 64.757 65.535 0 165 58 6 0 0 0 0.0017859 2 32859 64.841 32.821 1 0.77467 0.62787 0 2701400 1561300 1140100 8407 1694 3188 3270 13167;13168 13168 ELEDSPQENVSVTEIIKPCDDPK 23 2 0 Unmodified _ELEDSPQENVSVTEIIKPCDDPK_ 0 0 1 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 881.7585 3 881.421574 2641.24289 67163.59 0.4985 0.00043939 0.084225 7.4238E-05 0.58273 0.00051363 881.75596379443 887.433511495541 103.02 0.3299 103.02 102.88 103.21 0 79 21 6 0 0 0 0.055834 1 58514 12.802 10.19 1 0.90057 0.77821 0 4398000 2544200 1853800 8408 1806 3189 3271 13169 13169 ELEDSPQENVSVTEIIKPCDDPK 23 2 0 Unmodified _ELEDSPQENVSVTEIIKPCDDPK_ 0 0 1 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 881.7565 3 881.421574 2641.24289 67292.2 0.081462 7.1803E-05 0.1226 0.00010807 0.20407 0.00017987 881.756505281676 887.099290390064 102.81 0.35315 102.81 102.68 103.03 0 85 22 6 0 0 0 0.0015564 4 57502 27.947 27.947 1 0.91844 0.79141 0 3239700 1665000 1574700 8409 1806 3189 3271 13170;13171;13172;13173 13170 ELEEIVQPIISK 12 1 0 Unmodified _ELEEIVQPIISK_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.407 2 699.39795 1396.78135 71430.16 0.96813 0.00067711 0.27738 0.000194 1.2455 0.0008711 699.398314236536 703.405632964514 100.94 1.0285 100.94 100.35 101.38 0 286 77 6 0 0 0 1.8475E-12 3 61912 125.74 125.74 1 1.5395 1.729 0 68627000 29302000 39325000 8410 1466 3190 3272 13174;13175;13176 13175 ELEEIVQPIISK 12 1 0 Unmodified _ELEEIVQPIISK_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.4062 2 699.39795 1396.78135 72265.31 0.78418 0.00054845 0.26031 0.00018206 1.0445 0.00073051 699.398292923562 703.405560759208 100.28 0.92947 100.28 99.874 100.8 0 354 75 8 0 0 0 0.00069314 1 62980 67.207 67.207 1 1.5216 1.707 0 77669000 22955000 54715000 8411 1466 3190 3272 13177 13177 ELEEIVQPIISK 12 1 0 Unmodified _ELEEIVQPIISK_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.3989 2 699.39795 1396.78135 NaN NaN NaN 1.032 0.00072177 NaN NaN NaN NaN 113.05 0.60783 113.05 112.76 113.37 7.6294E-06 0 0 0 0.029083 1 65716 47.894 28.579 1 NaN NaN 0 4169600 4169600 0 8412 1466 3190 3272 13178 13178 ELEEIYMLPR 10 0 1 Oxidation (M) _ELEEIYM(ox)LPR_ ELEEIYM(1)LPR ELEEIYM(103.56)LPR 0 1 0 O14646;A0A024RC75;O14647;A0A1B0GTU9 O14646;A0A024RC75 O14646 CHD1;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.8341 2 654.828846 1307.64314 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.672 1 90.672 90.172 91.172 -7.6294E-06 0 0 0 2.0835E-06 1 54805 103.56 83.26 1 8413 1366;354 3191 3273 13179 13179 263 ELEELR 6 0 1 Unmodified _ELEELR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;F5H4J1;Q3SYK8;F5H6Y5;F5GWH6;B4DVW6;A0A024RBM9;Q6ZN12;P06727;Q9BT92;P61129;A8K394;Q4LE64;Q14980;Q15020;B4DYA2;B4DRG9;F8VV04;B4E3R6 A0A024R5M9;A8K394;Q4LE64;Q15020 Q4LE64 NUMA1;TCHP;APOA4;ZC3H6;NUMA1 variant protein;SART3 Apolipoprotein A-IV;Trichoplein keratin filament-binding protein;Zinc finger CCCH domain-containing protein 6;Nuclear mitotic apparatus protein 1;Squamous cell carcinoma antigen recognized by T-cells 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 394.7112 2 394.711068 787.407583 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.998 1 31.998 31.498 32.498 0 0 0 0 0.02889 1 15822 82.263 0 1 8414 186;1747;718;1748 3192 3274 13180 13180 ELEELRDK 8 1 1 Unmodified _ELEELRDK_ 0 0 1 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.2833 2 516.272021 1030.52949 86027.98 0.55437 0.00028621 -0.13634 -7.039E-05 0.41803 0.00021581 516.271846789437 525.283163645211 23.911 0.4876 23.911 23.75 24.237 1.9073E-06 69 23 5 0 0 0 0.010415 1 9760 104.44 45.456 1 0.8724 1.0123 0 29646000 15262000 14383000 8415 186;1747;718 3193 3275 13181 13181 ELEELRDK 8 1 1 Unmodified _ELEELRDK_ 0 0 1 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.2721 2 516.272021 1030.52949 83128.88 0.31891 0.00016465 -0.35766 -0.00018465 -0.038746 -2.0003E-05 516.271962874752 525.283140379882 23.496 0.55244 23.496 23.291 23.844 0 79 23 6 0 0 0 0.0060414 1 9369 111.95 28.333 1 0.91053 1.052 0 31242000 17342000 13901000 8416 186;1747;718 3193 3275 13182 13182 ELEELRDK 8 1 1 Unmodified _ELEELRDK_ 0 0 1 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.2722 2 516.272021 1030.52949 83842.32 0.11958 6.1736E-05 0.25963 0.00013404 0.37921 0.00019577 516.2721770942 525.283367059132 26.037 0.50949 26.037 25.848 26.357 -1.9073E-06 85 20 7 0 0 0 4.0567E-05 1 9717 147.29 63.674 1 1.5 1.2644 0 7570600 2895600 4675000 8417 186;1747;718 3193 3275 13183 13183 ELEELRDK 8 1 1 Unmodified _ELEELRDK_ 0 0 1 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.2721 2 516.272021 1030.52949 82402.91 0.2544 0.00013134 0.017135 8.8465E-06 0.27153 0.00014018 516.271916927686 525.283270260896 26.037 0.54947 26.037 25.843 26.392 0 97 23 7 0 0 0 0.007108 1 9193 110.12 39.203 1 1.3679 1.1509 0 7552500 3013300 4539200 8418 186;1747;718 3193 3275 13184 13184 ELEEVSPETPVVPATTQR 18 0 1 Unmodified _ELEEVSPETPVVPATTQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 997.0146 2 991.507477 1981.0004 NaN NaN NaN 0.24544 0.00024336 NaN NaN NaN NaN 82.27 0.36095 82.27 82.083 82.444 7.6294E-06 0 0 0 4.0343E-05 2 49211 67.252 50.045 1 NaN NaN 0 3996600 0 3996600 8419 1754 3194 3276 13185;13186 13186 ELEEVSPETPVVPATTQR 18 0 1 Unmodified _ELEEVSPETPVVPATTQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 997.5186 2 991.507477 1981.0004 NaN NaN NaN -0.006913 -6.8543E-06 NaN NaN NaN NaN 81.416 0.4198 81.416 81.193 81.613 0 0 0 0 0.034628 1 49711 33.589 19.926 1 NaN NaN 0 7237600 0 7237600 8420 1754 3194 3276 13187 13187 ELEEVSPETPVVPATTQR 18 0 1 Unmodified _ELEEVSPETPVVPATTQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 996.5156 2 991.507477 1981.0004 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.25 1 81.25 80.75 81.75 0 0 0 0 0.045213 1 49608 37.248 23.821 1 8421 1754 3194 3276 13188 13188 ELEFLSMANVELSSLAR 17 0 1 Oxidation (M) _ELEFLSM(ox)ANVELSSLAR_ ELEFLSM(1)ANVELSSLAR ELEFLSM(65.56)ANVELSSLAR 0 1 0 Q53F20;Q9BTT0;Q5TB19;B4E0D5;E9PLC4 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 967.9967 2 962.987866 1923.96118 61982.51 0.32078 0.00030891 -0.072656 -6.9967E-05 0.24813 0.00023894 963.489833196998 967.992348607785 124.42 0.675 124.42 124.19 124.86 0 237 46 9 0 0 0 3.6517E-05 3 80664 65.563 60.178 1 2.5468 2.6485 0 13508000 4395200 9112500 8422 1784 3195 3277 13189;13190;13191 13189 1651 ELEFLSMANVELSSLAR 17 0 1 Oxidation (M) _ELEFLSM(ox)ANVELSSLAR_ ELEFLSM(1)ANVELSSLAR ELEFLSM(110.38)ANVELSSLAR 0 1 0 Q53F20;Q9BTT0;Q5TB19;B4E0D5;E9PLC4 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 967.9932 2 962.987866 1923.96118 61446.1 0.68056 0.00065537 0.089504 8.6192E-05 0.77007 0.00074156 963.490009782744 967.992184715667 124.15 0.71228 124.15 123.84 124.55 0 166 46 6 0 0 0 6.3382E-10 3 82388 110.38 100.54 1 2.1132 2.094 0 15669000 4100600 11568000 8423 1784 3195 3277 13192;13193;13194 13192 1651 ELEFYLR 7 0 1 Unmodified _ELEFYLR_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.2561 2 485.255643 968.496732 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.606 1 90.606 90.106 91.106 0 0 0 0 0.022523 1 54766 77.748 21.238 1 8424 1635 3196 3278 13195 13195 ELEFYLR 7 0 1 Unmodified _ELEFYLR_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.2563 2 485.255643 968.496732 86661.45 0.10231 4.9645E-05 0.26962 0.00013083 0.37193 0.00018048 485.25558309543 490.259995446613 101.8 2.5209 101.8 100.98 103.5 0 667 173 8 0 0 0 0.0099468 6 57802 114.59 49.72 1 0.91607 0.79327 0 144220000 78424000 65793000 8425 1635 3196 3278 13196;13197;13198;13199;13200;13201 13199 ELEFYLR 7 0 1 Unmodified _ELEFYLR_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.2548 2 485.255643 968.496732 86532.6 0.20898 0.00010141 0.49128 0.00023839 0.70025 0.0003398 485.255639406457 490.260115978824 101.59 2.7241 101.59 100.86 103.58 0 664 189 8 0 0 0 0.016358 5 56354 98.133 33.267 1 0.88972 0.77689 0 142710000 76758000 65948000 8426 1635 3196 3278 13202;13203;13204;13205;13206 13203 ELEGELEGEIR 11 0 1 Unmodified _ELEGELEGEIR_ 0 0 0 B3KP05;Q9Y2K3 B3KP05 B3KP05 MYH15 Myosin-15 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.3162 2 637.317157 1272.61976 NaN NaN NaN -0.36435 -0.0002322 NaN NaN NaN NaN 84.904 0.23444 84.904 84.84 85.074 0 0 0 0 0.032581 1 52259 49.418 0 1 NaN NaN 0 4112200 4112200 0 8427 919 3197 3279 13207 13207 ELEGWEPDDDPIEEHK 16 1 0 Unmodified _ELEGWEPDDDPIEEHK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.2898 3 646.618165 1936.83267 76008.95 0.59777 0.00038653 -0.25318 -0.00016371 0.34459 0.00022282 646.61795414381 649.289314652107 76.889 0.65273 76.889 76.567 77.22 0 314 56 7 0 0 0 0.0025532 1 45317 34.485 30.824 1 0.71082 0.70317 0 25747000 14683000 11064000 8428 498 3198 3280 13208 13208 ELEGWEPDDDPIEEHK 16 1 0 Unmodified _ELEGWEPDDDPIEEHK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.6177 3 646.618165 1936.83267 76120.4 0.53337 0.00034489 -0.45432 -0.00029377 0.079049 5.1115E-05 646.617852462975 649.289140240327 75.926 0.61382 75.926 75.656 76.27 0 322 56 7 0 0 0 0.0062094 2 45696 28.627 24.966 1 0.73321 0.81276 0 47298000 26044000 21254000 8429 498 3198 3280 13209;13210 13209 ELEGWEPDDDPIEEHK 16 1 0 Unmodified _ELEGWEPDDDPIEEHK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.9528 3 646.618165 1936.83267 75535.54 0.58524 0.00037843 -0.39355 -0.00025448 0.19169 0.00012395 646.952247710843 649.289217614705 87.761 0.57707 87.761 87.508 88.085 0 226 35 9 0 0 0 0.010057 2 47438 24.043 20.381 1 1.2179 1.0008 0 9666600 4399500 5267100 8430 498 3198 3280 13211;13212 13212 ELEGWEPDDDPIEEHKK 17 2 0 Unmodified _ELEGWEPDDDPIEEHKK_ 0 0 1 B7Z7B9;E7CU85;A0A0B4J1S3;O15392 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.8627 3 689.316486 2064.92763 74463.48 0.49767 0.00034305 0.096882 6.6782E-05 0.59455 0.00040984 689.65056099024 694.659633402758 73.641 0.36551 73.641 73.423 73.788 0 50 22 4 0 0 0 0.029468 1 38156 16.306 16.306 1 1.1186 0.98121 0 1751400 606600 1144800 8431 498 3199 3281 13213 13213 ELEIESQTEEQPTTK 15 1 0 Unmodified _ELEIESQTEEQPTTK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;B4DSL9 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.4299 2 881.423078 1760.8316 64945.02 0.836 0.00073687 -0.13218 -0.0001165 0.70383 0.00062037 881.422994444924 885.43011259542 49.445 0.54903 49.445 49.245 49.794 0 210 34 10 0 0 0 3.0861E-58 2 27081 194.96 186.23 1 0.94545 1.0647 0 116940000 58750000 58190000 8432 925 3200 3282 13214;13215 13215 ELEIESQTEEQPTTK 15 1 0 Unmodified _ELEIESQTEEQPTTK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;B4DSL9 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.4293 2 881.423078 1760.8316 64948.99 0.72921 0.00064275 0.16645 0.00014671 0.89566 0.00078945 881.423341381118 885.430565865761 48.544 0.72252 48.544 48.189 48.912 0 348 54 9 0 0 0 2.4328E-71 2 26960 212.09 201.17 1 0.9353 1.0481 0 80420000 42852000 37568000 8433 925 3200 3282 13216;13217 13217 ELEIESQTEEQPTTK 15 1 0 Unmodified _ELEIESQTEEQPTTK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;B4DSL9 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 881.424 2 881.423078 1760.8316 64899.28 0.56735 0.00050007 0.14815 0.00013058 0.7155 0.00063066 881.42322301648 885.430377661693 57.442 0.85336 57.442 57.118 57.971 3.8147E-06 406 63 11 0 0 0 1.2355E-30 2 29142 157.68 157.68 1 1.6209 1.3146 0 25805000 10247000 15559000 8434 925 3200 3282 13218;13219 13219 ELEIESQTEEQPTTK 15 1 0 Unmodified _ELEIESQTEEQPTTK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;B4DSL9 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 881.4238 2 881.423078 1760.8316 64554.98 0.22719 0.00020025 0.25868 0.000228 0.48587 0.00042826 881.423363429489 885.430448120455 58.03 0.93185 58.03 57.755 58.687 -3.8147E-06 416 70 10 0 0 0 2.5043E-38 2 28799 164.48 164.48 1 1.5401 1.2614 0 27013000 10474000 16539000 8435 925 3200 3282 13220;13221 13221 ELEIGQAGSQR 11 0 1 Unmodified _ELEIGQAGSQR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.3083 2 594.304384 1186.59421 77821.78 0.76092 0.00045222 -0.073475 -4.3666E-05 0.68744 0.00040855 594.304303266581 599.308455746054 36.467 0.91985 36.467 35.929 36.849 0 449 86 8 0 0 0 2.3743E-10 2 18212 134.25 123.03 1 0.93117 1.0777 0 165500000 91395000 74106000 8436 908 3201 3283 13222;13223 13222 ELEIGQAGSQR 11 0 1 Unmodified _ELEIGQAGSQR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.3099 2 594.304384 1186.59421 78758.95 1.433 0.00085165 -0.14712 -8.7432E-05 1.2859 0.00076422 594.304191688742 599.308361798445 35.622 0.97224 35.622 35.12 36.092 0 429 85 7 0 0 0 1.7427E-12 3 17954 142.92 142.92 1 0.85721 0.982 0 170620000 92204000 78420000 8437 908 3201 3283 13224;13225;13226 13224 ELEIGQAGSQR 11 0 1 Unmodified _ELEIGQAGSQR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.3087 2 594.304384 1186.59421 78962.14 0.40095 0.00023828 -0.062018 -3.6858E-05 0.33893 0.00020143 594.304290673548 599.308441027389 41.117 1.2611 41.117 40.748 42.009 -3.8147E-06 446 99 10 0 0 0 3.8072E-05 2 18947 99.815 99.815 1 1.4648 1.2623 0 66125000 25349000 40776000 8438 908 3201 3283 13227;13228 13228 ELEIGQAGSQR 11 0 1 Unmodified _ELEIGQAGSQR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.3093 2 594.304384 1186.59421 76647.2 0.31568 0.00018761 0.15456 9.1856E-05 0.47024 0.00027946 594.304403493309 599.308561847985 41.281 1.3651 41.281 40.813 42.178 0 475 106 8 0 0 0 0.00029949 2 18454 88.495 88.495 1 1.4517 1.2663 0 41728000 17448000 24281000 8439 908 3201 3283 13229;13230 13229 ELELAHR 7 0 1 Unmodified _ELELAHR_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 439.2419 2 434.237784 866.461016 NaN NaN NaN 0.084529 3.6706E-05 NaN NaN NaN NaN 24.042 0.51649 24.042 23.844 24.36 0 0 0 0 0.022149 1 9904 97.071 30.077 1 NaN NaN 0 54486000 0 54486000 8440 765 3202 3284 13231 13231 ELELEVINLQK 11 1 0 Unmodified _ELELEVINLQK_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3852 2 664.377017 1326.73948 76063.41 0.70677 0.00046956 -0.32712 -0.00021733 0.37965 0.00025223 664.376623251497 668.384033249814 106.29 0.81894 106.29 105.95 106.77 0 332 58 8 0 0 0 1.8459E-05 1 65836 105.52 84.057 1 1.0156 1.141 0 69203000 35260000 33943000 8441 1803 3203 3285 13232 13232 ELELEVINLQK 11 1 0 Unmodified _ELELEVINLQK_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3773 2 664.377017 1326.73948 76899.09 0.66291 0.00044042 -0.24125 -0.00016028 0.42166 0.00028014 664.376690814263 668.384075254697 105.66 0.83176 105.66 105.36 106.19 0 326 60 9 0 0 0 1.384E-65 2 67167 215.88 187.67 1 0.92837 1.0398 0 81803000 40907000 40896000 8442 1803 3203 3285 13233;13234 13234 ELELEVINLQK 11 1 0 Unmodified _ELELEVINLQK_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.3772 2 664.377017 1326.73948 75723 0.82132 0.00054567 0.1415 9.4011E-05 0.96282 0.00063968 664.376856897577 668.384390410884 117.73 0.86639 117.73 117.44 118.31 0 211 36 8 0 0 0 4.7221E-08 2 69350 117.89 93.114 1 1.5704 1.2965 0 42735000 17062000 25673000 8443 1803 3203 3285 13235;13236 13236 ELELEVINLQK 11 1 0 Unmodified _ELELEVINLQK_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.3854 2 664.377017 1326.73948 74668.87 0.52821 0.00035093 0.060125 3.9946E-05 0.58834 0.00039088 664.376901113233 668.384195796299 117.54 0.75335 117.54 117.26 118.02 -7.6294E-06 210 35 9 0 0 0 2.8053E-12 1 68266 138.26 107.57 1 1.6258 1.3555 0 41163000 15514000 25649000 8444 1803 3203 3285 13237 13237 ELELQFDLGNLLASDR 16 0 1 Unmodified _ELELQFDLGNLLASDR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.4722 2 916.973073 1831.93159 NaN NaN NaN 0.061053 5.5984E-05 NaN NaN NaN NaN 133.27 0.314 133.27 133.04 133.35 0 0 0 0 0.002663 2 87121 59.198 31.717 1 NaN NaN 0 18561000 0 18561000 8445 1750 3204 3286 13238;13239 13238 ELELQFDLGNLLASDR 16 0 1 Unmodified _ELELQFDLGNLLASDR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.9775 2 916.973073 1831.93159 NaN NaN NaN 0.37622 0.00034498 NaN NaN NaN NaN 133.07 0.38506 133.07 132.84 133.23 0 0 0 0 6.8959E-165 1 89199 246.3 157.62 1 NaN NaN 0 34816000 0 34816000 8446 1750 3204 3286 13240 13240 ELELQFDLGNLLASDR 16 0 1 Unmodified _ELELQFDLGNLLASDR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.974 2 916.973073 1831.93159 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.96 1 132.96 132.46 133.46 0 0 0 0 5.7319E-62 1 89154 180.09 134.09 1 8447 1750 3204 3286 13241 13241 ELELQFDLGNLLASDRNPPTGLR 23 0 2 Unmodified _ELELQFDLGNLLASDRNPPTGLR_ 0 0 1 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.4537 3 856.785398 2567.33437 66544.98 1.1959 0.0010246 0.31381 0.00026887 1.5097 0.0012935 857.119404321374 863.79198372546 126.6 0.49506 126.6 126.36 126.85 0 189 36 8 0 0 0 3.4451E-09 2 82455 71.535 71.535 1 0.75908 0.83492 0 12041000 6900900 5139900 8448 1750 3205 3287 13242;13243 13243 ELELQFDLGNLLASDRNPPTGLR 23 0 2 Unmodified _ELELQFDLGNLLASDRNPPTGLR_ 0 0 1 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 863.7936 3 856.785398 2567.33437 65437.39 0.98512 0.00084404 0.32834 0.00028131 1.3135 0.0011254 857.119683483161 863.79198452158 126.08 0.60766 126.08 125.86 126.47 0 149 37 6 0 0 0 1.8858E-60 3 84072 174.2 174.2 1 0.83881 0.95264 0 35267000 17131000 18136000 8449 1750 3205 3287 13244;13245;13246 13244 ELEMIGFIENNVSK 14 1 0 Oxidation (M) _ELEM(ox)IGFIENNVSK_ ELEM(1)IGFIENNVSK ELEM(64.44)IGFIENNVSK 0 1 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.9142 2 819.905813 1637.79707 70252.27 0.74576 0.00061145 -0.49356 -0.00040467 0.2522 0.00020678 820.407018748381 823.912701927837 93.78 0.44818 93.78 93.59 94.038 -7.6294E-06 103 39 5 0 0 0 0.00011358 1 58128 64.439 64.439 1 4.2127 4.2586 0 13143000 2573800 10569000 8450 1763 3206 3288 13247 13247 1631 ELENIEEHQSVDIATLEDEAQENK 24 1 0 Unmodified _ELENIEEHQSVDIATLEDEAQENK_ 0 0 0 Q96SB8 Q96SB8 Q96SB8 SMC6 Structural maintenance of chromosomes protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 931.4354 3 928.433307 2782.27809 62755.82 0.73444 0.00068188 0.074832 6.9476E-05 0.80927 0.00075135 928.767398102245 931.439067293389 107.22 0.37882 107.22 107.05 107.43 0 101 21 8 0 0 0 0.00080308 1 61363 28.93 28.93 1 1.3863 1.1138 0 7837500 2926400 4911100 8451 1989 3207 3289 13248 13248 ELEPEMEFEIEPDK 14 1 0 Oxidation (M) _ELEPEM(ox)EFEIEPDK_ ELEPEM(1)EFEIEPDK ELEPEM(101.93)EFEIEPDK 0 1 0 Q9H307;B4DTD4;B4E392 Q9H307 Q9H307 PNN Pinin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.8978 2 875.890026 1749.7655 NaN NaN NaN 0.53819 0.00047139 NaN NaN NaN NaN 88.387 0.4339 88.387 88.198 88.632 0 0 0 0 5.3636E-07 1 53265 101.93 88.575 1 NaN NaN 0 6882000 0 6882000 8452 2028 3208 3290 13249 13249 1867 ELEPEMEFEIEPDK 14 1 0 Oxidation (M) _ELEPEM(ox)EFEIEPDK_ ELEPEM(1)EFEIEPDK ELEPEM(88.34)EFEIEPDK 0 1 0 Q9H307;B4DTD4;B4E392 Q9H307 Q9H307 PNN Pinin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 879.8995 2 875.890026 1749.7655 NaN NaN NaN 0.19307 0.00016911 NaN NaN NaN NaN 87.717 0.42736 87.717 87.444 87.871 -7.6294E-06 0 0 0 3.8237E-05 1 53963 88.338 75.382 1 NaN NaN 0 6621600 0 6621600 8453 2028 3208 3290 13250 13250 1867 ELEPFLLR 8 0 1 Unmodified _ELEPFLLR_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.7924 2 508.792392 1015.57023 86016.67 0.34991 0.00017803 0.26157 0.00013308 0.61147 0.00031111 508.79235289118 513.796508466477 101.64 0.92366 101.64 101.23 102.15 -7.6294E-06 258 72 4 0 0 0 0.0077411 2 63835 81.635 81.635 1 0.72196 0.72035 0 16691000 9044200 7647000 8454 1366 3209 3291 13251;13252 13252 ELEPFLLR 8 0 1 Unmodified _ELEPFLLR_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.7966 2 508.792392 1015.57023 86993.44 0.78755 0.0004007 -0.045427 -2.3113E-05 0.74212 0.00037759 508.792256225523 513.796261481036 114.41 0.63272 114.41 114.08 114.71 0 114 27 6 0 0 0 0.01271 2 66715 66.993 66.993 1 0.74261 0.62092 0 3673700 2120500 1553100 8455 1366 3209 3291 13253;13254 13253 ELEPFLLR 8 0 1 Unmodified _ELEPFLLR_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.7969 2 508.792392 1015.57023 86194.3 0.50936 0.00025916 0.10721 5.4549E-05 0.61657 0.00031371 508.792276922907 513.796430350714 114.16 0.69239 114.16 113.93 114.62 0 114 28 6 0 0 0 0.016899 2 65665 60.799 47.81 1 0.76196 0.65805 0 3415200 1564500 1850700 8456 1366 3209 3291 13255;13256 13256 ELEQDTPDAPPRPTSYYR 18 0 2 Unmodified _ELEQDTPDAPPRPTSYYR_ 0 0 1 P55201 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.0076 3 712.339514 2133.99671 72308.31 0.82233 0.00058578 0.24709 0.00017602 1.0694 0.00076179 712.674343609616 719.011461759411 65.352 0.5821 65.352 65.091 65.673 0 125 42 5 0 0 0 0.00028997 1 33765 31.818 31.818 1 2.4061 2.1813 0 2973300 970950 2002400 8457 1616 3210 3292 13257 13257 ELEQDTPDAPPRPTSYYR 18 0 2 Unmodified _ELEQDTPDAPPRPTSYYR_ 0 0 1 P55201 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.6748 3 712.339514 2133.99671 71238.73 0.49416 0.00035201 0.2618 0.00018649 0.75597 0.0005385 712.339437460997 719.011692732779 65.922 0.60574 65.922 65.68 66.286 -7.6294E-06 167 45 6 0 0 0 0.00036757 1 33301 28.472 28.472 1 2.0374 1.8263 0 2333400 640240 1693200 8458 1616 3210 3292 13258 13258 ELEQDTPDAPPRPTSYYR 18 0 2 Unmodified _ELEQDTPDAPPRPTSYYR_ 0 0 1 P55201 P55201 P55201 BRPF1 Peregrin MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.3414 3 712.339514 2133.99671 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.796 1 65.796 65.296 66.296 0 0 0 0 0.029364 1 33280 25.198 17.109 1 8459 1616 3210 3292 13259 13259 ELEQLGR 7 0 1 Unmodified _ELEQLGR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.7342 2 422.729792 843.445031 96099.45 0.37633 0.00015908 0.20861 8.8185E-05 0.58493 0.00024727 422.729663410576 427.733933565476 29.693 0.2396 29.693 29.535 29.774 -1.9073E-06 53 18 5 0 0 0 0.024839 1 14367 89.673 7.4108 1 1.1857 1.2193 0 21264000 9289700 11974000 8460 1754 3211 3293 13260 13260 ELESQISELQEDLESER 17 0 1 Unmodified _ELESQISELQEDLESER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1017.9807 2 1017.47911 2032.94367 60213.6 0.34508 0.00035111 0.30144 0.00030671 0.64652 0.00065782 1017.47903699904 1022.48357953154 109.99 0.70732 109.99 109.62 110.33 0 276 49 8 0 0 0 4.2194E-45 3 68787 168.31 168.31 1 1.535 1.7051 0 71782000 25421000 46361000 8461 81 3212 3294 13261;13262;13263 13262 ELESQISELQEDLESER 17 0 1 Unmodified _ELESQISELQEDLESER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1017.4786 2 1017.47911 2032.94367 60554.12 0.30653 0.00031188 0.41801 0.00042532 0.72454 0.0007372 1017.98094137238 1022.48389958808 109.46 0.62226 109.46 109.17 109.79 -7.6294E-06 256 41 8 0 0 0 0.00012829 1 70081 57.106 54.613 1 1.4924 1.7251 0 69144000 24888000 44256000 8462 81 3212 3294 13264 13264 ELESQISELQEDLESER 17 0 1 Unmodified _ELESQISELQEDLESER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1022.4836 2 1017.47911 2032.94367 60154.84 0.57336 0.00058338 0.11299 0.00011497 0.68635 0.00069835 1017.4794308631 1022.48322011482 121.41 0.80827 121.41 121.08 121.89 0 203 34 9 0 0 0 0.00014165 1 72249 55.724 55.724 1 2.2948 1.908 0 21584000 6102500 15481000 8463 81 3212 3294 13265 13265 ELESQISELQEDLESER 17 0 1 Unmodified _ELESQISELQEDLESER_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1017.4794 2 1017.47911 2032.94367 60204.46 0.49356 0.00050219 0.1683 0.00017124 0.66186 0.00067343 1017.47983983061 1022.98488600035 121.28 0.85383 121.28 121.01 121.86 0 211 43 9 0 0 0 7.3672E-05 1 71274 67.019 62.218 1 2.4487 2.1275 0 24337000 6747300 17590000 8464 81 3212 3294 13266 13266 ELESQVSGLEK 11 1 0 Unmodified _ELESQVSGLEK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.8215 2 609.81425 1217.61395 77952.96 0.60715 0.00037025 0.29506 0.00017993 0.90221 0.00055018 609.814393108044 613.821246598436 48.523 0.61625 48.523 48.288 48.904 -3.8147E-06 97 31 4 0 0 0 6.8436E-08 1 26376 114.5 70.049 1 0.86861 0.85558 0 19643000 9552700 10090000 8465 471 3213 3295 13267 13267 ELESQVSGLEK 11 1 0 Unmodified _ELESQVSGLEK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.8146 2 609.81425 1217.61395 75797.76 0.52519 0.00032027 -0.59316 -0.00036172 -0.067969 -4.1449E-05 609.813856543445 613.82073413739 56.592 0.46796 56.592 56.333 56.801 0 98 33 4 0 0 0 0.0046969 2 27927 57.55 32.731 1 0.84968 0.69279 0 1886300 943570 942690 8466 471 3213 3295 13268;13269 13269 ELESSEDRLDK 11 1 1 Unmodified _ELESSEDRLDK_ 0 0 1 A0A024RAC0;Q86V48;E5RFK8;Q05DE3 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.8286 2 660.817521 1319.62049 75810.42 0.34955 0.00023099 -0.1485 -9.8135E-05 0.20105 0.00013286 660.817446267176 669.828848650384 21.848 0.29669 21.848 21.744 22.041 0 38 12 4 0 0 0 2.2956E-05 2 7936 111.06 96.383 1 2.0157 2.251 0 11554000 3481100 8073400 8467 300 3214 3296 13270;13271 13270 ELETVCNDVLSLLDK 15 1 0 Unmodified _ELETVCNDVLSLLDK_ 0 0 0 A0A024R1K7;Q04917;Q9H4N8;B2R6N6;A2IDB2 A0A024R1K7 A0A024R1K7 YWHAH 14-3-3 protein eta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.4507 2 874.44276 1746.87097 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.09 1 125.09 124.59 125.59 0 0 0 0 0.0015275 1 83289 57.019 47.587 1 8468 78 3215 3297 13272 13272 ELEVCEDVAVR 11 0 1 Unmodified _ELEVCEDVAVR_ 0 0 0 P42695;G3V1A9;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.8196 2 659.819009 1317.62347 74399.81 0.51629 0.00034065 0.63076 0.00041619 1.1471 0.00075685 659.819254305631 664.82360315801 69.544 0.40443 69.544 69.294 69.699 0 130 32 5 0 0 0 0.00015639 2 40328 94.692 42.837 1 0.77651 0.78874 0 27740000 14303000 13437000 8469 1565 3216 3298 13273;13274 13274 ELEVCEDVAVR 11 0 1 Unmodified _ELEVCEDVAVR_ 0 0 0 P42695;G3V1A9;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.8198 2 659.819009 1317.62347 73762.98 0.51092 0.00033711 0.34475 0.00022747 0.85566 0.00056458 659.818706484722 664.823349916608 79.63 0.79708 79.63 79.23 80.027 0 254 48 9 0 0 0 0.0020022 2 42979 63.184 25.457 1 1.7235 1.4812 0 6504900 2216800 4288100 8470 1565 3216 3298 13275;13276 13275 ELEVCEDVAVR 11 0 1 Unmodified _ELEVCEDVAVR_ 0 0 0 P42695;G3V1A9;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.8199 2 659.819009 1317.62347 74278.94 0.46064 0.00030394 0.099135 6.5411E-05 0.55978 0.00036935 659.8188580516 664.82318269445 79.899 0.76856 79.899 79.553 80.321 0 187 45 7 0 0 0 0.0055485 1 42296 56.013 23.121 1 1.7073 1.4194 0 6029300 2155500 3873800 8471 1565 3216 3298 13277 13277 ELEVLLMCNK 10 1 0 Oxidation (M) _ELEVLLM(ox)CNK_ ELEVLLM(1)CNK ELEVLLM(178.87)CNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.8179 2 632.817424 1263.62029 74723.69 0.52978 0.00033525 -0.32578 -0.00020616 0.204 0.00012909 632.8174391395 636.82452691217 79.387 1.0409 79.387 78.977 80.018 0 482 93 9 0 0 0 1.4555E-30 2 46941 178.87 134.75 1 1.1786 1.329 0 129750000 54777000 74968000 8472 112 3217 3299 13278;13279 13278 96 ELEVLLMCNK 10 1 0 Oxidation (M) _ELEVLLM(ox)CNK_ ELEVLLM(1)CNK ELEVLLM(141.52)CNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8251 2 632.817424 1263.62029 75302.35 0.32716 0.00020703 -0.49142 -0.00031098 -0.16426 -0.00010395 632.817391247179 636.824458538343 78.279 1.452 78.279 77.709 79.161 7.6294E-06 542 125 10 0 0 0 3.695E-12 1 47339 141.52 127.75 1 1.1696 1.341 0 166400000 78035000 88364000 8473 112 3217 3299 13280 13280 96 ELEVLLMCNK 10 1 0 Oxidation (M) _ELEVLLM(ox)CNK_ ELEVLLM(1)CNK ELEVLLM(65.25)CNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.8179 2 632.817424 1263.62029 73778.52 0.44056 0.00027879 -0.086438 -5.47E-05 0.35412 0.00022409 632.817436244854 636.824501033516 90.135 1.4613 90.135 89.632 91.093 0 459 94 8 0 0 0 0.0015889 2 49770 65.246 51.243 1 0.49919 0.39143 0 11471000 7456900 4014500 8474 112 3217 3299 13281;13282 13281 96 ELEVLLMCNK 10 1 0 Oxidation (M) _ELEVLLM(ox)CNK_ ELEVLLM(1)CNK ELEVLLM(48.04)CNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.8256 2 632.817424 1263.62029 95492.79 0.67125 0.00042478 1.0084 0.00063815 1.6797 0.0010629 633.319035399458 636.824715575026 109.03 0.31214 109.03 108.9 109.21 0 36 15 5 0 0 0 0.0082309 2 62761 48.036 39.187 1 1.4142 1.2549 0 828780 369110 459670 8475 112 3217 3299 13283;13284 13284 96 ELEVLLMCNK 10 1 0 Oxidation (M) _ELEVLLM(ox)CNK_ ELEVLLM(1)CNK ELEVLLM(69.42)CNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.8174 2 632.817424 1263.62029 74481.21 0.44448 0.00028127 -0.2161 -0.00013675 0.22838 0.00014452 632.817374042807 636.824447537042 90.145 1.5595 90.145 89.48 91.04 0 365 96 7 0 0 0 0.0011455 2 48929 69.423 49.094 1 0.4715 0.3879 0 10212000 6962300 3250200 8476 112 3217 3299 13285;13286 13285 96 ELEVQHPAAK 10 1 0 Unmodified _ELEVQHPAAK_ 0 0 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.3074 2 561.301113 1120.58767 81569.15 0.53987 0.00030303 -0.076194 -4.2768E-05 0.46368 0.00026026 561.300888662511 565.30806238311 21.045 0.31945 21.045 20.871 21.19 -1.9073E-06 63 15 6 0 0 0 9.8137E-17 3 7369 160.88 141.9 1 3.1558 3.2016 0 13440000 3385000 10055000 8477 1592 3218 3300 13287;13288;13289 13287 ELEVQHPAAK 10 1 0 Unmodified _ELEVQHPAAK_ 0 0 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.3085 2 561.301113 1120.58767 79726.95 0.40534 0.00022752 0.41688 0.000234 0.82222 0.00046151 561.301533801268 565.308377152519 20.929 0.4935 20.929 20.599 21.092 0 60 19 5 0 0 0 2.8033E-30 3 7117 179.51 144.06 1 3.773 3.9141 0 11244000 2487800 8756600 8478 1592 3218 3300 13290;13291;13292 13290 ELEYFGLSAAILDK 14 1 0 Unmodified _ELEYFGLSAAILDK_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.9214 2 784.913964 1567.81338 69812.95 1.0022 0.00078661 0.021628 1.6976E-05 1.0238 0.00080359 784.913355496682 788.921136686716 122.67 0.4333 122.67 122.49 122.92 0 117 35 6 0 0 0 0.00012686 1 81330 80.69 60.386 1 0.9457 0.95507 0 8327200 4055800 4271400 8479 2150 3219 3301 13293 13293 ELEYFGLSAAILDK 14 1 0 Unmodified _ELEYFGLSAAILDK_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.4224 2 784.913964 1567.81338 NaN NaN NaN -2.0028 -0.001572 NaN NaN NaN NaN 122.87 0.11522 122.87 122.81 122.92 7.6294E-06 0 0 0 0.0036703 1 81536 61.353 24.66 1 NaN NaN 0 1539000 0 1539000 8480 2150 3219 3301 13294 13294 ELFDVVANPLVNDLIHGK 18 1 0 Unmodified _ELFDVVANPLVNDLIHGK_ 0 0 0 H7BYN4;Q02241;H0YME6;H0YMJ4 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.7018 3 665.029952 1992.06803 74801.95 1.1615 0.00077244 -0.25868 -0.00017203 0.90282 0.0006004 665.364061568413 667.701120598613 131.14 1.0345 131.14 130.55 131.58 0 391 67 8 0 0 0 0.00025027 2 85393 40.515 40.515 1 0.76504 0.75876 0 19187000 12258000 6929700 8481 1312 3220 3302 13295;13296 13296 ELFDVVANPLVNDLIHGK 18 1 0 Unmodified _ELFDVVANPLVNDLIHGK_ 0 0 0 H7BYN4;Q02241;H0YME6;H0YMJ4 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.702 3 665.029952 1992.06803 73873.21 0.88 0.00058522 -0.044199 -2.9394E-05 0.8358 0.00055583 665.364249018972 668.035593024047 130.54 1.0207 130.54 129.97 130.99 0 388 69 8 0 0 0 0.00025027 4 86963 40.515 40.515 1 0.73655 0.78102 0 20394000 11924000 8469400 8482 1312 3220 3302 13297;13298;13299;13300 13297 ELFGPELFR 9 0 1 Unmodified _ELFGPELFR_ 0 0 0 P35249;C9J8M3;C9JZI1;C9JXZ7;C9JTT7 P35249 P35249 RFC4 Replication factor C subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.2999 2 554.295299 1106.57605 84386.3 0.81806 0.00045345 -0.21063 -0.00011675 0.60743 0.0003367 554.294998516175 559.299294611102 110.21 0.61719 110.21 109.91 110.53 0 148 42 5 0 0 0 0.0016071 2 69089 83.206 65.82 1 1.2165 1.2648 0 20951000 9198200 11753000 8483 1541 3221 3303 13301;13302 13301 ELFGPELFR 9 0 1 Unmodified _ELFGPELFR_ 0 0 0 P35249;C9J8M3;C9JZI1;C9JXZ7;C9JTT7 P35249 P35249 RFC4 Replication factor C subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.3003 2 554.295299 1106.57605 82785.63 0.5828 0.00032304 0.10899 6.0412E-05 0.69178 0.00038345 554.295230205963 559.299287405658 109.49 0.56447 109.49 109.23 109.79 0 145 37 6 0 0 0 0.002701 1 70193 73.665 61.896 1 1.0408 1.0208 0 13906000 7020100 6886400 8484 1541 3221 3303 13303 13303 ELFGPELFR 9 0 1 Unmodified _ELFGPELFR_ 0 0 0 P35249;C9J8M3;C9JZI1;C9JXZ7;C9JTT7 P35249 P35249 RFC4 Replication factor C subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.2968 2 554.295299 1106.57605 81509.64 0.66003 0.00036585 0.18963 0.00010511 0.84965 0.00047096 554.295351891718 559.299404682654 121.1 0.48405 121.1 120.85 121.33 7.6294E-06 78 21 5 0 0 0 0.024384 2 71954 48.283 48.283 1 0.96163 0.80401 0 3632500 1654400 1978100 8485 1541 3221 3303 13304;13305 13304 ELFGPELFR 9 0 1 Unmodified _ELFGPELFR_ 0 0 0 P35249;C9J8M3;C9JZI1;C9JXZ7;C9JTT7 P35249 P35249 RFC4 Replication factor C subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.3001 2 554.295299 1106.57605 82846.77 0.7543 0.00041811 0.024892 1.3798E-05 0.7792 0.0004319 554.295175031263 559.299390955682 120.88 0.4748 120.88 120.63 121.11 7.6294E-06 93 20 6 0 0 0 0.045032 2 70850 40.021 35.029 1 0.78661 0.68747 0 2567400 1345500 1222000 8486 1541 3221 3303 13306;13307 13307 ELFLSR 6 0 1 Unmodified _ELFLSR_ 0 0 0 A0A024R534;O94776;E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8;E7ESY4;Q13330;A0A024R6P5;Q86TR6 A0A024R534;E7EQY4;E7ESY4 A0A024R534 MTA2;MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 382.7188 2 382.718696 763.422839 97485.16 0.2312 8.8486E-05 -0.032252 -1.2343E-05 0.19895 7.6142E-05 382.718575555026 387.72268478795 59.481 0.9543 59.481 58.984 59.938 0 250 75 5 0 0 0 0.0079062 1 33880 137.5 22.838 1 0.76788 0.85287 0 71523000 39324000 32199000 8487 168;1223;1221 3222 3304 13308 13308 ELFPIQMEGVK 11 1 0 Oxidation (M) _ELFPIQM(ox)EGVK_ ELFPIQM(1)EGVK ELFPIQM(60.72)EGVK 0 1 0 O96008;K7EJ57 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.8466 2 653.839213 1305.66387 74097.54 0.95593 0.00062503 -0.26506 -0.0001733 0.69088 0.00045172 653.839095232766 657.846035252132 85.036 0.88884 85.036 84.691 85.58 0 350 72 7 0 0 0 0.001425 1 50942 60.717 60.717 1 2.3946 2.6996 0 113290000 33607000 79679000 8488 1433 3223 3305 13309 13309 1124 ELFPIQMEGVK 11 1 0 Oxidation (M) _ELFPIQM(ox)EGVK_ ELFPIQM(1)EGVK ELFPIQM(43.51)EGVK 0 1 0 O96008;K7EJ57 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.8464 2 653.839213 1305.66387 74298.13 0.94855 0.0006202 0.11126 7.2743E-05 1.0598 0.00069295 653.839277080784 657.846355943914 83.93 0.78991 83.93 83.741 84.531 0 333 65 7 0 0 0 0.010154 1 51408 43.512 43.512 1 2.5592 2.8657 0 110580000 30103000 80474000 8489 1433 3223 3305 13310 13310 1124 ELFPIQMEGVK 11 1 0 Oxidation (M) _ELFPIQM(ox)EGVK_ ELFPIQM(1)EGVK ELFPIQM(44.31)EGVK 0 1 0 O96008;K7EJ57 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.8467 2 653.839213 1305.66387 77177.1 0.99026 0.00064747 -0.022165 -1.4492E-05 0.9681 0.00063298 653.839122203281 657.846099618553 97.019 0.59126 97.019 96.818 97.409 0 128 29 6 0 0 0 0.0093969 1 54520 44.309 44.309 1 1.7001 1.3748 0 2763700 922280 1841400 8490 1433 3223 3305 13311 13311 1124 ELFPIQMEGVK 11 1 0 Oxidation (M) _ELFPIQM(ox)EGVK_ ELFPIQM(1)EGVK ELFPIQM(44.31)EGVK 0 1 0 O96008;K7EJ57 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.8459 2 653.839213 1305.66387 77706.27 0.44943 0.00029385 0.41634 0.00027222 0.86576 0.00056607 653.839326780528 657.846326375706 96.888 0.67404 96.888 96.556 97.23 0 118 32 5 0 0 0 0.0093969 1 53605 44.309 44.309 1 1.7264 1.3841 0 2457400 829670 1627700 8491 1433 3223 3305 13312 13312 1124 ELFQTPCTDNPTTDEK 16 1 0 Unmodified _ELFQTPCTDNPTTDEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 952.9294 2 948.420013 1894.82547 62797.36 0.31011 0.00029411 -0.17135 -0.00016251 0.13876 0.0001316 948.921633410362 952.928496458699 69.677 0.8884 69.677 69.266 70.155 0 516 78 9 0 0 0 5.0005E-05 2 40742 83.617 81.478 1 1.7299 1.9586 0 100370000 39423000 60946000 8492 1569 3224 3306 13313;13314 13314 ELFQTPCTDNPTTDEK 16 1 0 Unmodified _ELFQTPCTDNPTTDEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 952.4272 2 948.420013 1894.82547 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.299 1 69.299 68.799 69.799 0 0 0 0 0.022812 1 40237 42.809 36.964 1 8493 1569 3224 3306 13315 13315 ELFQTPCTDNPTTDEK 16 1 0 Unmodified _ELFQTPCTDNPTTDEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 952.9267 2 948.420013 1894.82547 62932 0.44741 0.00042434 -0.0914 -8.6686E-05 0.35601 0.00033765 948.419976832809 952.928622166278 68.729 0.88683 68.729 68.275 69.162 0 492 74 10 0 0 0 0.00015387 2 40594 69.03 67.611 1 1.708 1.9223 0 121260000 47505000 73751000 8494 1569 3224 3306 13316;13317 13316 ELFQTPCTDNPTTDEK 16 1 0 Unmodified _ELFQTPCTDNPTTDEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 948.4194 2 948.420013 1894.82547 NaN NaN NaN -0.53722 -0.00050951 NaN NaN NaN NaN 68.363 0.059799 68.363 68.333 68.392 7.6294E-06 0 0 0 0.0037493 1 40622 55.261 42.701 1 NaN NaN 0 2859100 2859100 0 8495 1569 3224 3306 13318 13318 ELFQTPCTDNPTTDEK 16 1 0 Unmodified _ELFQTPCTDNPTTDEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 952.4256 2 948.420013 1894.82547 62321.05 0.38236 0.00036264 -0.27877 -0.00026439 0.1036 9.8254E-05 948.420049559183 952.427105590364 79.635 1.3576 79.635 79.263 80.621 0 571 89 13 0 0 0 0.00087397 2 43279 47.606 47.606 1 3.7964 3.2875 0 120030000 25866000 94159000 8496 1569 3224 3306 13319;13320 13320 ELFQTPCTDNPTTDEK 16 1 0 Unmodified _ELFQTPCTDNPTTDEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 952.4257 2 948.420013 1894.82547 62280.7 0.30926 0.00029331 -0.30819 -0.00029229 0.0010739 1.0185E-06 948.419981315161 952.427029400005 79.919 1.0175 79.919 79.579 80.597 0 530 61 13 0 0 0 0.00167 1 42600 44.193 44.193 1 3.679 3.1432 0 106250000 21523000 84727000 8497 1569 3224 3306 13321 13321 ELFQTPDHTEESTTDDK 17 1 0 Unmodified _ELFQTPDHTEESTTDDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.6318 3 664.96048 1991.85961 74547.3 0.43682 0.00029047 0.042301 2.8128E-05 0.47912 0.0003186 664.960578871528 667.63189066649 45.929 1.0918 45.929 45.541 46.633 0 656 94 11 0 0 0 2.332E-05 2 24553 65.225 65.225 1 1.8792 2.2321 0 544650000 183370000 361280000 8498 1569 3225 3307 13322;13323 13322 ELFQTPDHTEESTTDDK 17 1 0 Unmodified _ELFQTPDHTEESTTDDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 997.4374 2 996.937081 1991.85961 60437.13 0.21574 0.00021508 0.37417 0.00037302 0.5899 0.0005881 997.439028861866 1000.94450116044 45.869 0.24105 45.869 45.668 45.909 0 67 19 5 0 0 0 0.00013109 1 24625 66.989 66.989 1 1.8174 2.0504 0 110870000 32430000 78438000 8499 1569 3225 3307 13324 13324 ELFQTPDHTEESTTDDK 17 1 0 Unmodified _ELFQTPDHTEESTTDDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1000.9456 2 996.937081 1991.85961 NaN NaN NaN 0.082214 8.1962E-05 NaN NaN NaN NaN 45.755 0.15208 45.755 45.635 45.787 0 0 0 0 0.017117 1 24597 40.725 37.192 1 NaN NaN 0 31803000 0 31803000 8500 1569 3225 3307 13325 13325 ELFQTPDHTEESTTDDK 17 1 0 Unmodified _ELFQTPDHTEESTTDDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.2954 3 664.96048 1991.85961 74369.33 0.76381 0.0005079 0.08146 5.4168E-05 0.84527 0.00056207 665.294908334518 667.631932359337 44.722 1.0316 44.722 44.435 45.467 0 562 84 12 0 0 0 1.4805E-09 2 24372 104.2 104.2 1 1.8411 2.1698 0 606240000 204110000 402130000 8501 1569 3225 3307 13326;13327 13327 ELFQTPDHTEESTTDDK 17 1 0 Unmodified _ELFQTPDHTEESTTDDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 997.4379 2 996.937081 1991.85961 61069.52 0.60271 0.00060086 0.42214 0.00042085 1.0248 0.0010217 997.43881737274 1001.44608905303 44.744 0.41637 44.744 44.494 44.91 3.8147E-06 175 30 8 0 0 0 2.0348E-68 2 24570 218.5 218.5 1 1.9153 2.173 0 139950000 44098000 95852000 8502 1569 3225 3307 13328;13329 13329 ELFQTPDHTEESTTDDK 17 1 0 Unmodified _ELFQTPDHTEESTTDDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.6317 3 664.96048 1991.85961 74282.2 0.4816 0.00032025 -0.13514 -8.9862E-05 0.34646 0.00023039 665.294850394433 667.631867078109 53.039 2.3846 53.039 52.567 54.952 0 920 180 12 0 0 0 0.00043745 4 26112 40.962 40.962 1 3.5158 3.0527 0 134660000 30328000 104340000 8503 1569 3225 3307 13330;13331;13332;13333 13330 ELFQTPDHTEESTTDDK 17 1 0 Unmodified _ELFQTPDHTEESTTDDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.2948 3 664.96048 1991.85961 74282.58 0.42635 0.00028351 -0.085109 -5.6594E-05 0.34124 0.00022691 664.96064995105 667.631919751878 53.514 1.6533 53.514 53.089 54.743 0 783 120 13 0 0 0 1.4805E-09 3 25987 104.2 104.2 1 3.5251 3.0084 0 99061000 21816000 77244000 8504 1569 3225 3307 13334;13335;13336 13335 ELFQTPGHTEEAVAAGK 17 1 0 Unmodified _ELFQTPGHTEEAVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.4545 2 892.944315 1783.87408 64326.88 0.6135 0.00054782 0.42738 0.00038163 1.0409 0.00092945 893.446419274336 897.4532856972 57.659 0.83752 57.659 57.307 58.144 0 319 66 7 0 0 0 0.00019956 2 32463 49.732 49.732 1 1.7282 1.9118 0 57691000 18560000 39131000 8505 1569 3226 3308 13337;13338 13337 ELFQTPGHTEEAVAAGK 17 1 0 Unmodified _ELFQTPGHTEEAVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.9668 3 595.631969 1783.87408 77928.65 0.71063 0.00042327 0.055776 3.3222E-05 0.7664 0.0004565 595.966334428004 598.30337368174 57.68 1.5714 57.68 57.222 58.793 0 765 124 10 0 0 0 7.8604E-26 2 32563 108.34 108.34 1 1.803 2.1067 0 278590000 99657000 178940000 8506 1569 3226 3308 13339;13340 13340 ELFQTPGHTEEAVAAGK 17 1 0 Unmodified _ELFQTPGHTEEAVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.4465 2 892.944315 1783.87408 63857.97 0.40428 0.000361 0.68777 0.00061414 1.0921 0.00097514 893.447770449115 897.453418115517 56.288 0.73298 56.288 55.967 56.7 0 321 55 8 0 0 0 6.6174E-05 2 32190 73.435 73.435 1 1.499 1.636 0 40177000 13840000 26338000 8507 1569 3226 3308 13341;13342 13342 ELFQTPGHTEEAVAAGK 17 1 0 Unmodified _ELFQTPGHTEEAVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.3041 3 595.631969 1783.87408 77686.27 0.57634 0.00034328 -0.13078 -7.7896E-05 0.44556 0.00026539 595.631979584362 598.303274720946 56.291 1.3141 56.291 55.841 57.155 0 663 100 10 0 0 0 8.9644E-36 3 32160 122.75 122.75 1 1.8395 2.1505 0 288590000 101840000 186750000 8508 1569 3226 3308 13343;13344;13345 13344 ELFQTPGHTEEAVAAGK 17 1 0 Unmodified _ELFQTPGHTEEAVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.3036 3 595.631969 1783.87408 77754.23 0.59001 0.00035143 -0.10725 -6.388E-05 0.48276 0.00028755 595.632283655338 598.303483093855 66.858 1.9964 66.858 66.33 68.327 0 802 134 13 0 0 0 4.1545E-10 2 34659 90.561 90.561 1 3.3471 2.9049 0 132010000 29759000 102250000 8509 1569 3226 3308 13346;13347 13346 ELFQTPGHTEEAVAAGK 17 1 0 Unmodified _ELFQTPGHTEEAVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 897.454 2 892.944315 1783.87408 64374.74 0.49527 0.00044225 0.5137 0.00045871 1.009 0.00090096 892.944238331945 896.951360938222 66.856 1.2412 66.856 66.141 67.382 0 415 77 10 0 0 0 7.3672E-05 2 34660 67.019 60.333 1 3.5684 2.8989 0 28107000 6127400 21979000 8510 1569 3226 3308 13348;13349 13348 ELFQTPGHTEEAVAAGK 17 1 0 Unmodified _ELFQTPGHTEEAVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.3036 3 595.631969 1783.87408 78316.84 0.49993 0.00029777 -0.30657 -0.0001826 0.19336 0.00011517 595.966191488419 598.303265368167 67.352 1.9415 67.352 66.751 68.692 0 654 127 13 0 0 0 0.0001889 2 34166 42.708 42.708 1 3.4708 2.9612 0 97136000 20687000 76448000 8511 1569 3226 3308 13350;13351 13350 ELFQTPGHTEELVAAGK 17 1 0 Unmodified _ELFQTPGHTEELVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 913.9706 2 913.96779 1825.92103 64494.05 0.47629 0.00043531 -0.4844 -0.00044273 -0.0081175 -7.4192E-06 914.469259689831 917.97505863302 76.548 0.75677 76.548 76.131 76.887 0 296 62 8 0 0 0 2.5836E-05 2 44995 82.543 82.543 1 1.843 2.088 0 91281000 34276000 57005000 8512 1569 3227 3309 13352;13353 13352 ELFQTPGHTEELVAAGK 17 1 0 Unmodified _ELFQTPGHTEELVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.4775 2 913.96779 1825.92103 NaN NaN NaN -1.4607 -0.001335 NaN NaN NaN NaN 75.345 0.63904 75.345 75.017 75.656 0 0 0 0 2.2548E-07 2 45276 91.093 68.895 1 NaN NaN 0 40313000 0 40313000 8513 1569 3227 3309 13354;13355 13355 ELFQTPGHTEELVAAGK 17 1 0 Unmodified _ELFQTPGHTEELVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.9684 2 913.96779 1825.92103 NaN NaN NaN 0.14601 0.00013345 NaN NaN NaN NaN 75.349 0.50912 75.349 75.092 75.601 7.6294E-06 0 0 0 0.00077206 1 45294 63.091 54.137 1 NaN NaN 0 22077000 22077000 0 8514 1569 3227 3309 13356 13356 ELFQTPGHTEELVAAGK 17 1 0 Unmodified _ELFQTPGHTEELVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.3176 3 609.647619 1825.92103 75990.66 0.35007 0.00021342 -0.40838 -0.00024897 -0.058308 -3.5548E-05 609.647929313266 612.31889885718 87.25 2.2681 87.25 86.821 89.089 0 573 139 13 0 0 0 0.028925 1 47877 22.196 22.196 1 3.3954 2.9527 0 144160000 32630000 111530000 8515 1569 3227 3309 13357 13357 ELFQTPGHTEELVAAGK 17 1 0 Unmodified _ELFQTPGHTEELVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 918.4757 2 913.96779 1825.92103 NaN NaN NaN -1.2312 -0.0011253 NaN NaN NaN NaN 87.226 0.93286 87.226 86.955 87.888 0 0 0 0 0.041375 1 47835 34.183 28.211 1 NaN NaN 0 25227000 0 25227000 8516 1569 3227 3309 13358 13358 ELFQTPGHTEELVAAGK 17 1 0 Unmodified _ELFQTPGHTEELVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 914.4693 2 913.96779 1825.92103 NaN NaN NaN 0.39192 0.0003582 NaN NaN NaN NaN 87.258 0.58578 87.258 87.032 87.618 0 0 0 0 0.049911 1 47882 31.881 25.778 1 NaN NaN 0 7713800 7713800 0 8517 1569 3227 3309 13359 13359 ELFQTPGHTEELVAAGK 17 1 0 Unmodified _ELFQTPGHTEELVAAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.3182 3 609.647619 1825.92103 76208.22 0.44471 0.00027111 -0.74443 -0.00045384 -0.29973 -0.00018273 609.647819719818 612.318634903289 87.254 1.8214 87.254 86.9 88.722 0 531 104 13 0 0 0 2.3773E-05 1 47044 48.711 48.711 1 3.4385 2.952 0 144770000 34970000 109800000 8518 1569 3227 3309 13360 13360 ELFQTPGHTEESMTDDK 17 1 0 Oxidation (M) _ELFQTPGHTEESM(ox)TDDK_ ELFQTPGHTEESM(1)TDDK ELFQTPGHTEESM(83.4)TDDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.9604 3 660.95456 1979.84185 73779.66 0.80993 0.00053532 -0.25824 -0.00017068 0.55169 0.00036464 661.288927471045 663.625918230173 41.765 1.1355 41.765 41.332 42.468 0 692 90 13 0 0 0 5.4533E-06 2 21842 83.404 83.404 1 2.1066 2.5011 0 527910000 171970000 355940000 8519 1569 3228 3310 13361;13362 13361 1331 ELFQTPGHTEESMTDDK 17 1 0 Oxidation (M) _ELFQTPGHTEESM(ox)TDDK_ ELFQTPGHTEESM(1)TDDK ELFQTPGHTEESM(71.08)TDDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 991.4303 2 990.928202 1979.84185 61047.91 0.58599 0.00058067 -0.013664 -1.354E-05 0.57232 0.00056713 990.928487371628 994.935419096863 41.653 0.29984 41.653 41.435 41.735 0 162 26 9 0 0 0 3.3391E-05 1 21907 71.085 71.085 1 2.2375 2.5267 0 108060000 33807000 74252000 8520 1569 3228 3310 13363 13363 1331 ELFQTPGHTEESMTDDK 17 1 0 Oxidation (M) _ELFQTPGHTEESM(ox)TDDK_ ELFQTPGHTEESM(1)TDDK ELFQTPGHTEESM(67.46)TDDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 995.4366 2 990.928202 1979.84185 60615.7 0.48502 0.00048062 -0.10183 -0.00010091 0.38318 0.00037971 991.429628528497 994.935427763695 40.571 0.11088 40.571 40.494 40.605 0 49 9 7 0 0 0 3.5445E-05 2 21644 67.456 67.456 1 2.8208 3.1508 0 52898000 12785000 40114000 8521 1569 3228 3310 13364;13365 13364 1331 ELFQTPGHTEESMTDDK 17 1 0 Oxidation (M) _ELFQTPGHTEESM(ox)TDDK_ ELFQTPGHTEESM(1)TDDK ELFQTPGHTEESM(108.96)TDDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.6266 3 660.95456 1979.84185 73696.38 0.66893 0.00044213 -0.2435 -0.00016094 0.42543 0.00028119 660.954635288924 663.625924645204 40.727 0.87944 40.727 40.409 41.289 0 502 70 13 0 0 0 5.3532E-10 2 21693 108.96 108.96 1 2.112 2.489 0 609500000 188710000 420790000 8522 1569 3228 3310 13366;13367 13366 1331 ELFQTPGHTEESMTDDK 17 1 0 Oxidation (M) _ELFQTPGHTEESM(ox)TDDK_ ELFQTPGHTEESM(1)TDDK ELFQTPGHTEESM(91.62)TDDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.2894 3 660.95456 1979.84185 73045.77 0.38673 0.00025561 0.035792 2.3657E-05 0.42253 0.00027927 661.289084033261 663.62606598118 48.199 1.2728 48.199 47.733 49.005 3.8147E-06 564 94 11 0 0 0 2.3541E-07 2 23477 91.616 91.616 1 2.6764 2.2992 0 84711000 23927000 60785000 8523 1569 3228 3310 13368;13369 13369 1331 ELFQTPGHTEESMTDDK 17 1 0 Oxidation (M) _ELFQTPGHTEESM(ox)TDDK_ ELFQTPGHTEESM(1)TDDK ELFQTPGHTEESM(93.23)TDDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.9608 3 660.95456 1979.84185 73084.16 0.29157 0.00019271 0.0024639 1.6285E-06 0.29403 0.00019434 661.289010255816 663.62606206218 48.473 1.3758 48.473 48.097 49.473 0 676 112 12 0 0 0 1.9087E-07 2 22953 93.226 93.226 1 2.6098 2.2123 0 64256000 18881000 45374000 8524 1569 3228 3310 13370;13371 13370 1331 ELFQTPGHTEESMTDDK 17 1 0 Unmodified _ELFQTPGHTEESMTDDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.2953 3 655.622922 1963.84694 74275.7 0.87144 0.00057134 -0.3477 -0.00022796 0.52374 0.00034338 655.957054938631 658.294256433038 65.822 0.77834 65.822 65.53 66.309 0 392 53 11 0 0 0 9.9925E-05 1 33991 48.677 48.677 1 4.2149 3.4052 0 22850000 4024600 18825000 8525 1569 3228 3311 13372 13372 ELFQTPGHTEESMTDDK 17 1 0 Unmodified _ELFQTPGHTEESMTDDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.2949 3 655.622922 1963.84694 74457.1 0.50523 0.00033124 -0.071607 -4.6947E-05 0.43362 0.00028429 655.622978391748 658.294430322997 66.363 0.85693 66.363 66.026 66.883 0 385 58 10 0 0 0 3.3913E-05 2 33551 58.98 58.344 1 4.1145 3.3043 0 14951000 3028400 11923000 8526 1569 3228 3311 13373;13374 13373 ELFQTPGPSEESMTDEK 17 1 0 Oxidation (M) _ELFQTPGPSEESM(ox)TDEK_ ELFQTPGPSEESM(1)TDEK ELFQTPGPSEESM(81.49)TDEK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 975.4346 2 970.925128 1939.8357 61512.28 0.28168 0.00027349 -0.0087322 -8.4783E-06 0.27295 0.00026501 971.426847475279 974.93230603951 65.498 0.97327 65.498 65.051 66.025 0 688 88 11 0 0 0 1.5061E-05 3 37972 81.494 81.494 1 2.1315 2.4636 0 225800000 74086000 151710000 8527 1569 3229 3312 13375;13376;13377 13377 1332 ELFQTPGPSEESMTDEK 17 1 0 Oxidation (M) _ELFQTPGPSEESM(ox)TDEK_ ELFQTPGPSEESM(1)TDEK ELFQTPGPSEESM(115.14)TDEK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 971.4265 2 970.925128 1939.8357 61648.23 0.18092 0.00017566 0.024549 2.3836E-05 0.20547 0.0001995 970.925187865888 974.932349383558 64.458 0.89059 64.458 64.018 64.908 0 676 80 11 0 0 0 7.9179E-13 4 37743 115.14 115.14 1 2.1473 2.4904 0 218800000 66293000 152510000 8528 1569 3229 3312 13378;13379;13380;13381 13380 1332 ELFQTPGPSEESMTDEK 17 1 0 Oxidation (M) _ELFQTPGPSEESM(ox)TDEK_ ELFQTPGPSEESM(1)TDEK ELFQTPGPSEESM(47.62)TDEK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 974.932 2 970.925128 1939.8357 63758.84 0.015348 1.4902E-05 -0.48314 -0.00046909 -0.46779 -0.00045419 971.427402345181 974.931151517234 90.457 0.53934 90.457 90.222 90.762 0 105 33 5 0 0 0 0.00022997 1 50106 47.621 47.621 1 3.5707 2.8213 0 5207900 892530 4315400 8529 1569 3229 3312 13382 13382 1332 ELFQTPGPSEESMTDEK 17 1 0 Oxidation (M) _ELFQTPGPSEESM(ox)TDEK_ ELFQTPGPSEESM(1)TDEK ELFQTPGPSEESM(45.36)TDEK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 975.4355 2 970.925128 1939.8357 61113.13 -0.036586 -3.5523E-05 0.27461 0.00026663 0.23802 0.0002311 970.925574346522 974.932575222371 75.451 1.2516 75.451 75.016 76.268 0 645 87 11 0 0 0 0.00038589 1 39125 45.357 45.357 1 2.6667 2.2407 0 50005000 14183000 35823000 8530 1569 3229 3312 13383 13383 1332 ELFQTPGPSEESMTDEK 17 1 0 Unmodified _ELFQTPGPSEESMTDEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.9387 2 962.927671 1923.84079 NaN NaN NaN 0.8735 0.00084112 NaN NaN NaN NaN 90.472 0.75836 90.472 90.187 90.945 7.6294E-06 0 0 0 0.038723 1 49980 34.898 34.898 1 NaN NaN 0 11352000 0 11352000 8531 1569 3229 3313 13384 13384 ELFQTPGTDKPTTDEK 16 2 0 Unmodified _ELFQTPGTDKPTTDEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.3068 3 602.963384 1805.86832 76294.68 0.61479 0.00037069 1.0309 0.00062162 1.6457 0.00099232 603.297809326511 608.307126741743 47.969 0.83517 47.969 47.763 48.598 3.8147E-06 556 71 11 0 0 0 0.00019473 2 26071 49.559 47.117 1 2.1028 2.4798 0 495880000 152280000 343600000 8532 1569 3230 3314 13385;13386 13386 ELFQTPGTDKPTTDEK 16 2 0 Unmodified _ELFQTPGTDKPTTDEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.9423 2 903.941438 1805.86832 62726.99 0.57795 0.00052243 -0.1223 -0.00011055 0.45565 0.00041188 903.941057510121 911.955836197006 47.957 0.58376 47.957 47.809 48.393 0 153 50 8 0 0 0 9.9405E-25 2 26015 177.81 177.81 1 1.8376 2.1684 0 131660000 43897000 87764000 8533 1569 3230 3314 13387;13388 13387 ELFQTPGTDKPTTDEK 16 2 0 Unmodified _ELFQTPGTDKPTTDEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.306 3 602.963384 1805.86832 75858.79 0.73418 0.00044268 -0.037053 -2.2341E-05 0.69712 0.00042034 603.297806122126 608.306278087859 46.628 0.86209 46.628 46.331 47.193 0 540 73 12 0 0 0 1.5176E-18 2 25733 136.39 136.39 1 1.8173 2.1234 0 496250000 159750000 336500000 8534 1569 3230 3314 13389;13390 13389 ELFQTPGTDKPTTDEK 16 2 0 Unmodified _ELFQTPGTDKPTTDEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 911.9567 2 903.941438 1805.86832 64157.58 0.75271 0.00068041 0.10062 9.0951E-05 0.85333 0.00077136 903.941454381127 911.955575965296 46.606 0.57847 46.606 46.433 47.011 3.8147E-06 286 49 8 0 0 0 6.1289E-56 3 25762 196.5 196.5 1 1.9463 2.2619 0 128820000 41828000 86996000 8535 1569 3230 3314 13391;13392;13393 13391 ELFQTPGTDKPTTDEK 16 2 0 Unmodified _ELFQTPGTDKPTTDEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.2984 3 602.963384 1805.86832 76746.35 0.53755 0.00032412 0.68755 0.00041457 1.2251 0.00073869 602.963544115288 608.306862409359 55.36 1.6556 55.36 54.822 56.478 3.8147E-06 644 106 12 0 0 0 7.1518E-05 2 27675 71.316 71.316 1 3.9208 3.3131 0 113220000 23042000 90180000 8536 1569 3230 3314 13394;13395 13394 ELFQTPGTDKPTTDEK 16 2 0 Unmodified _ELFQTPGTDKPTTDEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.2978 3 602.963384 1805.86832 76628.73 0.48194 0.00029059 0.59003 0.00035577 1.072 0.00064636 603.297812971493 608.306698717717 55.824 1.4705 55.824 55.278 56.748 0 644 95 12 0 0 0 6.9958E-05 2 27323 63.682 63.682 1 3.7575 3.2132 0 84582000 18310000 66272000 8537 1569 3230 3314 13396;13397 13396 ELFQTPGTDKPTTDEK 16 2 0 Unmodified _ELFQTPGTDKPTTDEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 911.9566 2 903.941438 1805.86832 63633.18 0.33754 0.00030512 0.11449 0.00010349 0.45203 0.00040861 903.94139215575 911.95577924143 55.846 0.94802 55.846 55.4 56.348 0 344 59 9 0 0 0 0.00083494 1 27353 80.746 80.746 1 3.4974 2.9619 0 16117000 4133800 11983000 8538 1569 3230 3314 13398 13398 ELFQTPICTDK 11 1 0 Unmodified _ELFQTPICTDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.3397 2 676.331753 1350.64895 NaN NaN NaN 0.33595 0.00022721 NaN NaN NaN NaN 79.715 0.49475 79.715 79.397 79.892 0 0 0 0 0.0074888 1 48457 62.303 41.999 1 NaN NaN 0 8852800 0 8852800 8539 1569 3231 3315 13399 13399 ELFQTPICTDKPTTHEK 17 2 0 Unmodified _ELFQTPICTDKPTTHEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.3049 3 682.338457 2043.99354 NaN NaN NaN 0.022919 1.5639E-05 NaN NaN NaN NaN 53.842 0.57346 53.842 53.599 54.172 0 0 0 0 0.00088911 2 30685 62.203 46.81 1 NaN NaN 0 46075000 0 46075000 8540 1569 3232 3316 13400;13401 13400 ELFQTPVCTDKPTTHEK 17 2 0 Unmodified _ELFQTPVCTDKPTTHEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.0009 3 677.666573 2029.97789 74138.05 0.66881 0.00045323 -0.19311 -0.00013087 0.47569 0.00032236 677.666395669626 683.009324950126 48.194 0.77588 48.194 47.782 48.558 0 265 66 7 0 0 0 1.3169E-05 1 26158 82.007 82.007 1 1.8166 2.1446 0 54011000 18892000 35119000 8541 1569 3233 3317 13402 13402 ELFQTPVCTDKPTTHEK 17 2 0 Unmodified _ELFQTPVCTDKPTTHEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.0104 3 677.666573 2029.97789 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.853 1 47.853 47.353 48.353 3.8147E-06 0 0 0 0.00026071 1 26004 61.641 46.486 1 8542 1569 3233 3317 13403 13403 ELFQTPVCTDKPTTHEK 17 2 0 Unmodified _ELFQTPVCTDKPTTHEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.001 3 677.666573 2029.97789 73232.23 0.42795 0.00029001 -0.12508 -8.4761E-05 0.30288 0.00020525 678.000736255475 683.009341469206 46.118 0.70454 46.118 45.777 46.482 0 278 56 8 0 0 0 3.1891E-05 2 25320 70.96 70.96 1 1.6829 1.9526 0 84842000 31080000 53762000 8543 1569 3233 3317 13404;13405 13405 ELFQTPVCTDKPTTHEK 17 2 0 Unmodified _ELFQTPVCTDKPTTHEK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 683.0104 3 677.666573 2029.97789 72793.3 0.638 0.00043235 -0.19811 -0.00013425 0.43989 0.0002981 678.001020371885 683.009403662355 54.899 1.017 54.899 54.589 55.606 0 394 66 10 0 0 0 1.8257E-05 2 27316 79.805 79.805 1 4.1079 3.5004 0 22507000 4211900 18296000 8544 1569 3233 3317 13406;13407 13406 ELFQTR 6 0 1 Unmodified _ELFQTR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 402.2176 2 397.213778 792.413003 92282.71 0.0018753 7.4491E-07 -0.17274 -6.8616E-05 -0.17087 -6.7872E-05 397.213607226503 402.217772755863 41.197 1.2097 41.197 40.711 41.921 0 456 95 7 0 0 0 0.053297 1 19047 77.374 34.656 1 3.2452 2.7435 0 30315000 6932500 23383000 8545 1569 3234 3318 13408 13408 ELFSAPGHTEESMTIDK 17 1 0 Oxidation (M) _ELFSAPGHTEESM(ox)TIDK_ ELFSAPGHTEESM(1)TIDK ELFSAPGHTEESM(112.3)TIDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.962 3 636.627896 1906.86186 75151.83 0.38817 0.00024712 0.15144 9.6409E-05 0.5396 0.00034353 636.628174480062 639.299545552084 54.852 0.94557 54.852 54.49 55.436 0 585 91 10 0 0 0 5.6013E-11 2 30821 112.3 101.83 1 2.0271 2.3393 0 219100000 74148000 144950000 8546 1569 3235 3319 13409;13410 13410 1333 ELFSAPGHTEESMTIDK 17 1 0 Oxidation (M) _ELFSAPGHTEESM(ox)TIDK_ ELFSAPGHTEESM(1)TIDK ELFSAPGHTEESM(70.56)TIDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 958.947 2 954.438206 1906.86186 62482.91 0.35133 0.00033532 -0.11146 -0.00010638 0.23987 0.00022894 954.437614927352 958.445558665529 54.895 0.60117 54.895 54.573 55.175 0 233 58 6 0 0 0 3.3686E-05 3 30992 70.563 64.84 1 1.9744 2.2349 0 88276000 33868000 54408000 8547 1569 3235 3319 13411;13412;13413 13413 1333 ELFSAPGHTEESMTIDK 17 1 0 Oxidation (M) _ELFSAPGHTEESM(ox)TIDK_ ELFSAPGHTEESM(1)TIDK ELFSAPGHTEESM(84.83)TIDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.9617 3 636.627896 1906.86186 74911.32 0.5788 0.00036848 0.034494 2.196E-05 0.6133 0.00039044 636.628010614238 639.299461230653 53.654 0.8717 53.654 53.301 54.172 0 594 83 10 0 0 0 3.6471E-06 2 30573 84.829 78.413 1 2.1194 2.4605 0 225030000 74775000 150250000 8548 1569 3235 3319 13414;13415 13415 1333 ELFSAPGHTEESMTIDK 17 1 0 Oxidation (M) _ELFSAPGHTEESM(ox)TIDK_ ELFSAPGHTEESM(1)TIDK ELFSAPGHTEESM(113.24)TIDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 958.9459 2 954.438206 1906.86186 62446.66 0.55612 0.00053079 -0.14408 -0.00013752 0.41204 0.00039327 954.437791422146 958.445347335435 53.635 0.59473 53.635 53.378 53.973 0 314 57 8 0 0 0 9.3933E-13 2 30560 113.24 107.52 1 2.1624 2.4166 0 53177000 16365000 36811000 8549 1569 3235 3319 13416;13417 13416 1333 ELFSAPGHTEESMTIDK 17 1 0 Oxidation (M) _ELFSAPGHTEESM(ox)TIDK_ ELFSAPGHTEESM(1)TIDK ELFSAPGHTEESM(53.5)TIDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.9628 3 636.627896 1906.86186 75349.2 0.33956 0.00021617 0.092305 5.8764E-05 0.43186 0.00027493 636.628077713717 639.299523456635 64.475 1.0884 64.475 64.032 65.121 0 616 91 10 0 0 0 4.132E-05 1 32383 53.504 46.776 1 2.7885 2.2832 0 26940000 6840600 20100000 8550 1569 3235 3319 13418 13418 1333 ELFSAPGHTEESMTIDK 17 1 0 Oxidation (M) _ELFSAPGHTEESM(ox)TIDK_ ELFSAPGHTEESM(1)TIDK ELFSAPGHTEESM(40.96)TIDK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.6342 3 636.627896 1906.86186 75506.84 0.47863 0.00030471 0.79285 0.00050475 1.2715 0.00080946 636.962015863663 639.299266222769 82.236 0.78765 82.236 82 82.787 0 164 46 7 0 0 0 0.00036006 1 43847 40.962 31.213 1 3.5655 2.7931 0 3343000 806360 2536600 8551 1569 3235 3319 13419 13419 1333 ELFSAPGHTEESMTIDK 17 1 0 Unmodified _ELFSAPGHTEESMTIDK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.9681 3 631.296258 1890.86694 77023.05 0.49173 0.00031043 -0.35347 -0.00022314 0.13826 8.7284E-05 631.630589865159 633.967260516578 82.142 1.1291 82.142 81.466 82.595 0 304 66 10 0 0 0 0.0021138 1 44732 30.107 30.107 1 3.971 3.0829 0 14561000 3265200 11295000 8552 1569 3235 3320 13420 13420 ELFSQFGK 8 1 0 Unmodified _ELFSQFGK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;H0YCC8 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.2556 2 478.247818 954.481082 89140.4 0.070836 3.3877E-05 0.60199 0.0002879 0.67283 0.00032178 478.248293133177 482.255015466755 72.258 0.87775 72.258 71.621 72.499 0 246 71 6 0 0 0 0.011764 1 42102 69.176 53.677 1 2.0116 2.1648 0 38415000 13172000 25243000 8553 818 3236 3321 13421 13421 ELFSQFGK 8 1 0 Unmodified _ELFSQFGK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;H0YCC8 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2549 2 478.247818 954.481082 88792.82 0.15713 7.5145E-05 0.4054 0.00019388 0.56252 0.00026903 478.248048548031 482.254976880439 70.906 0.58623 70.906 70.639 71.225 0 197 44 7 0 0 0 0.013679 1 42316 64.757 53.884 1 2.165 2.4397 0 60054000 16808000 43247000 8554 818 3236 3321 13422 13422 ELFSTFGELK 10 1 0 Unmodified _ELFSTFGELK_ 0 0 0 Q9Y4C8;A0A024RBL4 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.806 2 585.805697 1169.59684 82084.96 0.67185 0.00039357 0.28317 0.00016588 0.95502 0.00055946 585.8058581399 589.813052186718 102.36 0.52779 102.36 102.15 102.67 0 104 43 4 0 0 0 0.0029784 1 63097 66.621 40.885 1 0.7935 0.7998 0 5411800 2546400 2865400 8555 2145 3237 3322 13423 13423 ELGELIPLR 9 0 1 Unmodified _ELGELIPLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.3152 2 520.310949 1038.60735 85703.94 0.57295 0.00029811 0.27697 0.00014411 0.84992 0.00044222 520.311091628644 525.315139969351 103.14 0.908 103.14 102.62 103.53 0 309 78 6 0 0 0 0.025948 1 63434 47.657 28.17 1 0.61089 0.65261 0 44690000 29248000 15443000 8556 186;1747 3238 3323 13424 13424 ELGELIPLR 9 0 1 Unmodified _ELGELIPLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.3107 2 520.310949 1038.60735 85769.07 0.66419 0.00034559 -0.24319 -0.00012653 0.42101 0.00021905 520.310750465621 525.314911580528 102.21 0.91175 102.21 101.84 102.75 0 290 71 6 0 0 0 1.9395E-05 2 64633 118.74 78.475 1 0.79182 0.87437 0 41692000 23177000 18516000 8557 186;1747 3238 3323 13425;13426 13426 ELGELIPLR 9 0 1 Unmodified _ELGELIPLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.3113 2 520.310949 1038.60735 83781.77 0.51854 0.0002698 0.18795 9.7791E-05 0.70648 0.00036759 520.310973804916 525.315100440723 114.84 0.87083 114.84 114.59 115.46 0 154 39 6 0 0 0 0.018803 1 67060 51.736 36.365 1 1.4659 1.2515 0 8840700 3823900 5016800 8558 186;1747 3238 3323 13427 13427 ELGELIPLR 9 0 1 Unmodified _ELGELIPLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.311 2 520.310949 1038.60735 85146.37 0.43962 0.00022874 0.071855 3.7387E-05 0.51147 0.00026612 520.310935909474 525.31508011338 114.68 0.79944 114.68 114.38 115.18 7.6294E-06 153 36 6 0 0 0 0.045082 1 66008 40.002 30.787 1 1.4581 1.1897 0 9413300 3677700 5735600 8559 186;1747 3238 3323 13428 13428 ELGFDASEVELTR 13 0 1 Unmodified _ELGFDASEVELTR_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3663 2 733.362096 1464.70964 70065.02 0.70448 0.00051664 -0.061404 -4.5032E-05 0.64307 0.00047161 733.361672215112 738.366307665661 97.216 0.79292 97.216 96.822 97.615 -7.6294E-06 354 70 7 0 0 0 6.8805E-09 2 59248 118.28 118.28 1 2.1186 2.3522 0 70291000 24537000 45754000 8560 979 3239 3324 13429;13430 13429 ELGFDASEVELTR 13 0 1 Unmodified _ELGFDASEVELTR_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3666 2 733.362096 1464.70964 69702.77 0.86661 0.00063554 -0.3269 -0.00023973 0.53972 0.00039581 733.361355192027 738.366030123163 96.597 0.82288 96.597 96.212 97.035 0 354 71 8 0 0 0 5.4097E-19 4 60150 145.91 145.91 1 2.1852 2.4917 0 98106000 26956000 71150000 8561 979 3239 3324 13431;13432;13433;13434 13431 ELGFEMK 7 1 0 Oxidation (M) _ELGFEM(ox)K_ ELGFEM(1)K ELGFEM(42.47)K 0 1 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 439.2146 2 435.207304 868.400055 92887.84 -0.049786 -2.1667E-05 0.34339 0.00014944 0.2936 0.00012778 435.207510120612 439.214318978713 37.636 0.81038 37.636 37.023 37.833 3.8147E-06 211 65 5 0 0 0 0.040941 1 19258 42.474 18.276 1 1.1903 1.2898 0 22430000 10563000 11868000 8562 790 3240 3325 13435 13435 629 ELGFSSHR 8 0 1 Unmodified _ELGFSSHR_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7326 2 466.732866 931.451179 86420.5 -0.012922 -6.0312E-06 -0.21264 -9.9244E-05 -0.22556 -0.00010528 466.732812731388 471.736722149383 24.955 0.56554 24.955 24.708 25.274 -1.9073E-06 147 28 8 0 0 0 0.0066199 2 10548 86.472 41.751 1 0.88921 1.0528 0 383950000 206030000 177930000 8563 2023;1687 3241 3326 13436;13437 13436 ELGFSSHR 8 0 1 Unmodified _ELGFSSHR_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7328 2 466.732866 931.451179 87543.36 0.039434 1.8405E-05 0.045798 2.1376E-05 0.085232 3.9781E-05 466.732912559616 471.736880508205 24.473 1.0555 24.473 24.072 25.128 0 170 46 8 0 0 0 0.00014575 2 10141 136.33 73.619 1 0.87214 1.0153 0 426740000 224280000 202460000 8564 2023;1687 3241 3326 13438;13439 13439 ELGFSSHR 8 0 1 Unmodified _ELGFSSHR_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 311.4908 3 311.491003 931.451179 NaN NaN NaN 0.052767 1.6437E-05 NaN NaN NaN NaN 24.502 0.25541 24.502 24.36 24.616 0 0 0 0 0.004255 1 10190 63.565 47.411 1 NaN NaN 0 7419700 7419700 0 8565 2023;1687 3241 3326 13440 13440 ELGFSSHR 8 0 1 Unmodified _ELGFSSHR_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 466.7329 2 466.732866 931.451179 88214.34 0.21066 9.8321E-05 -0.29362 -0.00013704 -0.082962 -3.8721E-05 466.732782733985 471.736780638582 27.012 1.1168 27.012 26.762 27.879 -1.9073E-06 229 51 9 0 0 0 0.023225 2 10306 56.659 26.474 1 1.3358 1.1523 0 77912000 34058000 43855000 8566 2023;1687 3241 3326 13441;13442 13442 ELGFSSHR 8 0 1 Unmodified _ELGFSSHR_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.7332 2 466.732866 931.451179 87660.13 -0.016414 -7.6609E-06 -0.18933 -8.8368E-05 -0.20575 -9.6029E-05 466.732857037465 471.736798538324 26.911 1.2849 26.911 26.654 27.939 0 229 57 10 0 0 0 0.011932 2 9737 68.787 41.991 1 1.3586 1.1854 0 53939000 23392000 30548000 8567 2023;1687 3241 3326 13443;13444 13444 ELGGLGMLSMGHVLIPQSDLR 21 0 1 2 Oxidation (M) _ELGGLGM(ox)LSM(ox)GHVLIPQSDLR_ ELGGLGM(1)LSM(1)GHVLIPQSDLR ELGGLGM(46.7)LSM(46.7)GHVLIPQSDLR 0 2 0 Q6P2Q9;B4DK16;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.7259 3 752.388934 2254.14497 70949.54 0.80652 0.00060682 -0.60202 -0.00045295 0.2045 0.00015387 752.722789057817 756.05898152272 104.51 0.57919 104.51 104.26 104.84 0 166 44 7 0 0 0 1.1329E-05 1 66058 46.702 46.702 1 2.08 2.1326 0 21048000 5776300 15271000 8568 1854 3242 3327 13445 13445 1709;1710 ELGIQVHSVTR 11 0 1 Unmodified _ELGIQVHSVTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.9027 3 413.566571 1237.67788 94240.28 0.2856 0.00011811 -0.1589 -6.5714E-05 0.1267 5.2401E-05 413.566473684985 416.90255552678 48.537 0.66248 48.537 48.22 48.882 0 254 50 8 0 0 0 0.0013394 2 26334 58.172 48.168 1 0.82409 0.93521 0 108930000 59267000 49660000 8569 899;1099 3243 3328 13446;13447 13446 ELGIQVHSVTR 11 0 1 Unmodified _ELGIQVHSVTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.8464 2 619.846219 1237.67788 75896.13 0.69771 0.00043247 0.1187 7.3578E-05 0.81641 0.00050605 619.846167618235 624.850261830636 48.542 0.5374 48.542 48.243 48.78 0 189 40 6 0 0 0 4.9141E-06 1 26516 122.69 109.34 1 0.85956 0.95596 0 75855000 39593000 36262000 8570 899;1099 3243 3328 13448 13448 ELGIQVHSVTR 11 0 1 Unmodified _ELGIQVHSVTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.8494 2 619.846219 1237.67788 79081.36 0.42885 0.00026582 -0.0094617 -5.8648E-06 0.41939 0.00025996 619.846156541852 624.850303796381 46.982 0.46856 46.982 46.724 47.193 0 214 41 7 0 0 0 5.7803E-10 2 25896 123.75 123.75 1 0.90396 1.0489 0 58557000 32715000 25842000 8571 899;1099 3243 3328 13449;13450 13449 ELGIQVHSVTR 11 0 1 Unmodified _ELGIQVHSVTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.9036 3 413.566571 1237.67788 93756.35 0.19553 8.0866E-05 -0.056751 -2.347E-05 0.13878 5.7395E-05 413.566525988434 416.902580304063 47.015 0.48219 47.015 46.724 47.206 0 230 42 7 0 0 0 1.8234E-05 2 25941 98.898 98.898 1 0.77503 0.88506 0 91377000 53275000 38102000 8572 899;1099 3243 3328 13451;13452 13451 ELGIQVHSVTR 11 0 1 Unmodified _ELGIQVHSVTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 416.9024 3 413.566571 1237.67788 92500.48 -0.13294 -5.4979E-05 0.1326 5.4837E-05 -0.00034222 -1.4153E-07 413.566568453465 416.902697187922 55.527 0.64203 55.527 55.291 55.933 3.8147E-06 219 39 9 0 0 0 0.024272 2 27766 30.729 26.874 1 1.0991 0.89783 0 15790000 7499000 8290700 8573 899;1099 3243 3328 13453;13454 13453 ELGIQVHSVTR 11 0 1 Unmodified _ELGIQVHSVTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.8505 2 619.846219 1237.67788 76308.41 0.54918 0.00034041 -0.02612 -1.6191E-05 0.52306 0.00032422 619.846192076494 624.850327593008 55.533 0.61604 55.533 55.277 55.893 0 206 38 8 0 0 0 5.9165E-05 2 27785 115.57 115.57 1 1.1041 0.90093 0 14665000 6752400 7912800 8574 899;1099 3243 3328 13455;13456 13455 ELGIQVHSVTR 11 0 1 Unmodified _ELGIQVHSVTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.8506 2 619.846219 1237.67788 77876.2 0.45543 0.00028229 -0.1147 -7.1096E-05 0.34073 0.0002112 619.846073982027 624.850343725717 55.815 0.64836 55.815 55.558 56.206 -3.8147E-06 209 42 8 0 0 0 0.00044761 2 27335 83.883 79.659 1 1.056 0.85906 0 12404000 6199200 6205000 8575 899;1099 3243 3328 13457;13458 13457 ELGIQVHSVTR 11 0 1 Unmodified _ELGIQVHSVTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 413.5665 3 413.566571 1237.67788 92737.23 -0.31127 -0.00012873 0.17622 7.2878E-05 -0.13505 -5.5854E-05 413.566588365899 416.902704540608 55.831 0.72281 55.831 55.558 56.281 -3.8147E-06 244 47 9 0 0 0 0.024642 1 27371 30.563 23.675 1 1.0515 0.85746 0 12752000 6860000 5892400 8576 899;1099 3243 3328 13459 13459 ELGITALHIK 10 1 0 Unmodified _ELGITALHIK_ 0 0 0 P62263;H0YB22;E5RH77;A4D1M5 P62263 P62263 RPS14;LOC401404 40S ribosomal protein S14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.8396 2 547.832049 1093.64954 81541.5 0.65408 0.00035833 -0.04294 -2.3524E-05 0.61114 0.0003348 547.832028784293 551.83906131165 78.721 1.2577 78.721 78.369 79.626 0 595 113 10 0 0 0 5.7334E-06 2 46493 104.2 61.328 1 0.90301 1.0761 0 670120000 369800000 300320000 8577 1638 3244 3329 13460;13461 13460 ELGITALHIK 10 1 0 Unmodified _ELGITALHIK_ 0 0 0 P62263;H0YB22;E5RH77;A4D1M5 P62263 P62263 RPS14;LOC401404 40S ribosomal protein S14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 368.2282 3 365.557125 1093.64954 98886.44 0.16285 5.9532E-05 -0.37042 -0.00013541 -0.20756 -7.5877E-05 365.556933617377 368.228302216844 78.77 0.52866 78.77 78.492 79.021 -7.6294E-06 212 46 6 0 0 0 0.041434 1 46528 25.437 6.8304 1 0.82401 0.87987 0 32148000 17954000 14194000 8578 1638 3244 3329 13462 13462 ELGITALHIK 10 1 0 Unmodified _ELGITALHIK_ 0 0 0 P62263;H0YB22;E5RH77;A4D1M5 P62263 P62263 RPS14;LOC401404 40S ribosomal protein S14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.8319 2 547.832049 1093.64954 81788.8 0.4392 0.00024061 -0.071238 -3.9027E-05 0.36797 0.00020158 547.832088175056 551.83902555785 77.256 1.1497 77.256 76.93 78.08 -7.6294E-06 555 95 9 0 0 0 0.00012052 4 46624 96.668 57.37 1 0.86614 1.0219 0 860690000 453470000 407230000 8579 1638 3244 3329 13463;13464;13465;13466 13464 ELGITALHIK 10 1 0 Unmodified _ELGITALHIK_ 0 0 0 P62263;H0YB22;E5RH77;A4D1M5 P62263 P62263 RPS14;LOC401404 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.8331 2 547.832049 1093.64954 80573.94 0.49678 0.00027215 -0.077848 -4.2648E-05 0.41893 0.00022951 547.83215344261 551.839073303137 89.613 1.6013 89.613 89.231 90.832 0 613 105 10 0 0 0 0.0035438 2 49397 64.04 47.264 1 1.1394 0.99744 0 192160000 90020000 102140000 8580 1638 3244 3329 13467;13468 13467 ELGITALHIK 10 1 0 Unmodified _ELGITALHIK_ 0 0 0 P62263;H0YB22;E5RH77;A4D1M5 P62263 P62263 RPS14;LOC401404 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 365.5568 3 365.557125 1093.64954 97956.1 0.10076 3.6835E-05 -0.23312 -8.5218E-05 -0.13235 -4.8383E-05 365.556989070926 368.228346245741 89.607 0.63383 89.607 89.324 89.958 -7.6294E-06 188 40 6 0 0 0 0.041139 1 49534 20.207 16.62 1 1.0851 0.86507 0 9620600 4109900 5510700 8581 1638 3244 3329 13469 13469 ELGITALHIK 10 1 0 Unmodified _ELGITALHIK_ 0 0 0 P62263;H0YB22;E5RH77;A4D1M5 P62263 P62263 RPS14;LOC401404 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.8321 2 547.832049 1093.64954 81272.86 0.28685 0.00015715 0.056149 3.076E-05 0.343 0.00018791 547.832254990777 551.839103264859 89.42 2.0318 89.42 88.986 91.018 0 617 126 10 0 0 0 0.0029629 4 48412 69.812 44.075 1 1.0507 0.90848 0 227540000 116140000 111390000 8582 1638 3244 3329 13470;13471;13472;13473 13471 ELGLPEELVSR 11 0 1 Unmodified _ELGLPEELVSR_ 0 0 0 B4DUT7;A0A140VJK6;P49915;Q53F90 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.3398 2 621.340435 1240.66632 80500.31 0.89854 0.0005583 0.011361 7.0593E-06 0.9099 0.00056536 621.340135968065 626.344466860213 98.491 0.74251 98.491 98.202 98.944 0 195 59 5 0 0 0 0.0073354 1 60192 52.79 28.014 1 2.1762 2.2627 0 38064000 12755000 25309000 8583 604 3245 3330 13474 13474 ELGLPEELVSR 11 0 1 Unmodified _ELGLPEELVSR_ 0 0 0 B4DUT7;A0A140VJK6;P49915;Q53F90 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.3398 2 621.340435 1240.66632 78784.96 0.36613 0.00022749 0.26739 0.00016614 0.63351 0.00039363 621.340438817004 626.344455854561 97.791 0.82186 97.791 97.325 98.147 0 254 66 7 0 0 0 0.0073711 2 61070 52.725 28.504 1 2.0464 2.0491 0 17134000 6244100 10889000 8584 604 3245 3330 13475;13476 13476 ELGNIIQK 8 1 0 Unmodified _ELGNIIQK_ 0 0 0 P53582;Q5CZ91;H0Y955 P53582 P53582 METAP1;DKFZp781C0419 Methionine aminopeptidase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.7761 2 457.768917 913.523281 87578.52 0.50715 0.00023216 0.66969 0.00030656 1.1768 0.00053872 457.768497016652 461.775958629344 48.506 0.6116 48.506 48.189 48.801 0 148 44 6 0 0 0 0.027969 1 27139 53.554 10.64 1 0.98302 1.0195 0 33387000 19331000 14056000 8585 1605 3246 3331 13477 13477 ELGSLPQEAFEK 12 1 0 Unmodified _ELGSLPQEAFEK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.3739 2 674.343175 1346.6718 77750.03 0.85888 0.00057918 0.16331 0.00011013 1.0222 0.0006893 674.34318869772 678.350154536664 80.477 0.62199 80.477 80.081 80.703 0 198 52 5 0 0 0 0.0063016 1 47771 72.434 59.314 1 1.3792 1.3539 0 23004000 9374900 13629000 8586 803 3247 3332 13478 13478 ELGVGIALR 9 0 1 Unmodified _ELGVGIALR_ 0 0 0 E7DVW5;Q01469 E7DVW5 E7DVW5 FABP5 Fatty acid-binding protein, epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2847 2 464.284734 926.554916 NaN NaN NaN 0.045445 2.11E-05 NaN NaN NaN NaN 84.987 0.45657 84.987 84.702 85.159 0 0 0 0 0.020129 1 50866 58.782 32.673 1 NaN NaN 0 16170000 16170000 0 8587 1217 3248 3333 13479 13479 ELGVGIALR 9 0 1 Unmodified _ELGVGIALR_ 0 0 0 E7DVW5;Q01469 E7DVW5 E7DVW5 FABP5 Fatty acid-binding protein, epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2849 2 464.284734 926.554916 NaN NaN NaN 0.59853 0.00027789 NaN NaN NaN NaN 83.917 0.50533 83.917 83.68 84.186 0 0 0 0 0.017706 1 51377 60.682 34.573 1 NaN NaN 0 23034000 23034000 0 8588 1217 3248 3333 13480 13480 ELHENVLDK 9 1 0 Unmodified _ELHENVLDK_ 0 0 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.792 2 548.785296 1095.55604 82352.38 0.87446 0.00047989 0.089685 4.9218E-05 0.96415 0.00052911 548.784953005337 552.792206459845 28.193 0.29108 28.193 28.026 28.317 0 62 21 5 0 0 0 3.6139E-12 3 13209 160.36 113.01 1 1.3359 1.3371 0 26665000 13830000 12835000 8589 1388 3249 3334 13481;13482;13483 13481 ELHENVLDK 9 1 0 Unmodified _ELHENVLDK_ 0 0 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.7916 2 548.785296 1095.55604 80824.06 0.2099 0.00011519 -1.0843 -0.00059505 -0.87441 -0.00047986 548.784544731693 552.791852249246 27.427 0.53172 27.427 27.059 27.591 0 86 23 7 0 0 0 1.0634E-11 1 12690 154.85 107.86 1 0.22016 0.24785 0 121900000 97668000 24229000 8590 1388 3249 3334 13484 13484 ELHGPFSQVEDLER 14 0 1 Unmodified _ELHGPFSQVEDLER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.2766 3 552.605643 1654.7951 81499.38 0.7771 0.00042943 0.098435 5.4396E-05 0.87554 0.00048383 552.605646363186 555.941655953506 82.425 0.85902 82.425 82.024 82.883 0 335 72 7 0 0 0 9.615E-10 2 49396 90.412 79.558 1 0.82485 0.89632 0 50465000 28639000 21825000 8591 1745 3250 3335 13485;13486 13486 ELHGPFSQVEDLER 14 0 1 Unmodified _ELHGPFSQVEDLER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.9419 3 552.605643 1654.7951 81926.01 0.64785 0.000358 0.14185 7.8387E-05 0.7897 0.00043639 552.605740852023 555.941703060651 80.68 0.8578 80.68 80.428 81.286 0 333 70 6 0 0 0 3.753E-05 2 49360 69.258 58.623 1 0.8683 0.97595 0 45976000 22860000 23116000 8592 1745 3250 3335 13487;13488 13488 ELHGPFSQVEDLER 14 0 1 Unmodified _ELHGPFSQVEDLER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.9421 3 552.605643 1654.7951 81735.45 0.44006 0.00024318 0.38972 0.00021536 0.82979 0.00045855 552.605881482569 555.941830997014 93.342 0.78416 93.342 93.07 93.854 0 239 50 8 0 0 0 0.0042861 2 52033 23.489 22.869 1 1.4176 1.2056 0 9093900 3521900 5572000 8593 1745 3250 3335 13489;13490 13489 ELHGPFSQVEDLER 14 0 1 Unmodified _ELHGPFSQVEDLER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.2772 3 552.605643 1654.7951 81497.61 0.42434 0.00023449 0.19583 0.00010822 0.62017 0.00034271 552.605803815056 555.941789854292 93.207 0.79946 93.207 92.862 93.661 0 235 48 8 0 0 0 0.012734 1 51072 18.321 16.834 1 1.3838 1.1502 0 5999600 2596000 3403600 8594 1745 3250 3335 13491 13491 ELHGPFSQVEDLERVEGITGK 21 1 1 Unmodified _ELHGPFSQVEDLERVEGITGK_ 0 0 1 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 590.3076 4 585.801211 2339.17574 80187.59 0.87043 0.0005099 -0.53853 -0.00031547 0.3319 0.00019443 586.051359060402 590.30693382821 112.5 0.48412 112.5 112.2 112.68 0 100 24 8 0 0 0 0.054607 1 65354 8.089 4.9452 1 1.4246 1.1879 0 6272500 2507200 3765300 8595 1745 3251 3336 13492 13492 ELHGTSIVPK 10 1 0 Unmodified _ELHGTSIVPK_ 0 0 0 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.8066 2 540.806031 1079.59751 84662.81 0.6062 0.00032784 -0.54577 -0.00029516 0.060432 3.2682E-05 540.805792860177 544.812908766719 33.907 0.40616 33.907 33.692 34.098 0 116 38 4 0 0 0 0.010745 1 16835 52.937 32.312 1 0.56853 0.58273 0 14406000 9707700 4697900 8596 1323 3252 3337 13493 13493 ELHGTSIVPK 10 1 0 Unmodified _ELHGTSIVPK_ 0 0 0 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.8076 2 540.806031 1079.59751 82624.3 0.87519 0.00047331 -0.083403 -4.5105E-05 0.79178 0.0004282 540.805936147326 544.812863578421 32.55 0.39576 32.55 32.316 32.712 0 105 36 4 0 0 0 0.0015265 1 16143 73.248 49.093 1 0.55981 0.58637 0 19441000 12067000 7374800 8597 1323 3252 3337 13494 13494 ELHGTSIVPK 10 1 0 Unmodified _ELHGTSIVPK_ 0 0 0 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.8068 2 540.806031 1079.59751 83018.67 0.5852 0.00031648 -0.4407 -0.00023833 0.1445 7.8149E-05 540.805924225473 544.81283658145 37.814 0.47007 37.814 37.58 38.05 0 178 38 6 0 0 0 0.0030376 1 17023 66.351 42.196 1 0.59115 0.46322 0 3889700 2557600 1332000 8598 1323 3252 3337 13495 13495 ELHGTSIVPK 10 1 0 Unmodified _ELHGTSIVPK_ 0 0 0 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.8066 2 540.806031 1079.59751 81683.46 0.35829 0.00019376 -0.26482 -0.00014322 0.093466 5.0547E-05 540.806006040815 544.812928613715 37.528 0.5435 37.528 37.289 37.832 0 186 44 6 0 0 0 0.018136 1 16424 47.574 31.912 1 0.61886 0.50158 0 2955600 1826200 1129400 8599 1323 3252 3337 13496 13496 ELHINLIPNK 10 1 0 Unmodified _ELHINLIPNK_ 0 0 0 K9JA46;P07900;Q2VPJ6;G3V2J8;Q14568;B4DTA5;Q86SX1 K9JA46 K9JA46 EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2396 3 397.567912 1189.68191 98512.41 -0.24757 -9.8427E-05 0.20112 7.9958E-05 -0.046455 -1.8469E-05 397.902300879288 400.239394543468 76.44 0.56175 76.44 76.186 76.747 0 139 41 6 0 0 0 0.011948 1 46001 29.551 27.808 1 4.2256 4.2216 0 14138000 3831800 10306000 8600 1348 3253 3338 13497 13497 ELHINLIPNK 10 1 0 Unmodified _ELHINLIPNK_ 0 0 0 K9JA46;P07900;Q2VPJ6;G3V2J8;Q14568;B4DTA5;Q86SX1 K9JA46 K9JA46 EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8556 2 595.84823 1189.68191 80166.09 0.24842 0.00014802 0.40384 0.00024062 0.65225 0.00038864 595.848063742655 599.855649980358 76.411 0.94263 76.411 75.988 76.93 7.6294E-06 279 74 7 0 0 0 4.7334E-08 2 46025 116.37 99.132 1 2.8022 3.1042 0 46506000 10525000 35981000 8601 1348 3253 3338 13498;13499 13498 ELHINLIPNK 10 1 0 Unmodified _ELHINLIPNK_ 0 0 0 K9JA46;P07900;Q2VPJ6;G3V2J8;Q14568;B4DTA5;Q86SX1 K9JA46 K9JA46 EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.8558 2 595.84823 1189.68191 79305.53 0.7017 0.0004181 0.38168 0.00022742 1.0834 0.00064553 595.847997032322 599.85576781609 88.366 0.84776 88.366 88.008 88.856 0 186 50 6 0 0 0 0.00097601 1 48740 78.192 78.192 1 2.3517 1.8332 0 3754400 1084300 2670100 8602 1348 3253 3338 13500 13500 ELIEDDFEVNVNDAR 15 0 1 Unmodified _ELIEDDFEVNVNDAR_ 0 0 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 889.9158 2 889.415588 1776.81662 65173.89 0.75403 0.00067065 0.49253 0.00043807 1.2466 0.0011087 889.415745621038 894.922321331401 98.015 0.5284 98.015 97.693 98.222 0 107 42 4 0 0 0 6.8037E-06 2 59812 95.401 85.913 1 0.77819 0.81037 0 21166000 8784500 12381000 8603 2033 3254 3339 13501;13502 13502 ELIEDDFEVNVNDAR 15 0 1 Unmodified _ELIEDDFEVNVNDAR_ 0 0 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 889.9158 2 889.415588 1776.81662 65159.29 0.73903 0.00065731 0.39345 0.00034994 1.1325 0.0010072 889.917284288976 894.921277820805 97.339 0.56522 97.339 97.035 97.6 7.6294E-06 120 43 4 0 0 0 0.00022435 1 60650 70.488 64.643 1 0.7311 0.73345 0 17501000 9909100 7592000 8604 2033 3254 3339 13503 13503 ELIEDDFEVNVNDAR 15 0 1 Unmodified _ELIEDDFEVNVNDAR_ 0 0 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 889.4185 2 889.415588 1776.81662 65593.33 0.67039 0.00059625 0.42382 0.00037695 1.0942 0.0009732 889.917615907581 894.420517301984 110.6 0.42343 110.6 110.42 110.84 0 48 19 4 0 0 0 0.0083147 1 63865 35.737 35.737 1 0.91735 0.77876 0 5183500 2876100 2307400 8605 2033 3254 3339 13504 13504 ELIEDDFEVNVNDAR 15 0 1 Unmodified _ELIEDDFEVNVNDAR_ 0 0 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 889.4168 2 889.415588 1776.81662 65844.79 0.35878 0.0003191 0.32585 0.00028982 0.68463 0.00060892 889.41574073819 894.420234199576 110.71 0.66074 110.71 110.45 111.11 0 82 33 4 0 0 0 0.0029777 1 62998 43.382 43.382 1 0.85757 0.73008 0 2945000 1628200 1316800 8606 2033 3254 3339 13505 13505 ELIEELIAK 9 1 0 Unmodified _ELIEELIAK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.3181 2 529.310615 1056.60668 84565.79 0.37674 0.00019941 0.27262 0.0001443 0.64936 0.00034371 529.310260079306 533.318480299067 99.855 0.87758 99.855 99.487 100.36 0 255 76 6 0 0 0 0.0013285 2 60991 86.833 42.386 1 0.7903 0.77752 0 23835000 13054000 10781000 8607 790 3255 3340 13506;13507 13506 ELIEELIAK 9 1 0 Unmodified _ELIEELIAK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.3109 2 529.310615 1056.60668 84136.82 0.72123 0.00038176 0.064892 3.4348E-05 0.78612 0.0004161 529.310211471817 533.318266234868 112.38 0.77895 112.38 112.08 112.86 7.6294E-06 162 41 6 0 0 0 0.0060214 1 65224 65.246 31.45 1 1.1029 0.88511 0 8092700 4139200 3953500 8608 790 3255 3340 13508 13508 ELIEELIAK 9 1 0 Unmodified _ELIEELIAK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.3104 2 529.310615 1056.60668 83696.13 0.51313 0.0002716 0.13165 6.9682E-05 0.64477 0.00034129 529.310281718396 533.318136189755 112.28 0.72148 112.28 111.96 112.68 0 173 38 6 0 0 0 0.010479 1 64211 59.245 25.448 1 1.2884 1.049 0 7321500 3298500 4023000 8609 790 3255 3340 13509 13509 ELIHLLPIK 9 1 0 Unmodified _ELIHLLPIK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.3478 2 538.347335 1074.68012 84277.87 0.87353 0.00047026 -0.25467 -0.0001371 0.61885 0.00033316 538.34713841189 542.354175476909 98.457 1.1195 98.457 97.825 98.944 0 255 89 4 0 0 0 0.00027715 2 59986 103.75 103.75 1 1.2678 1.3171 0 29538000 12271000 17267000 8610 780 3256 3341 13510;13511 13510 ELIHLLPIK 9 1 0 Unmodified _ELIHLLPIK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.3474 2 538.347335 1074.68012 84067.7 0.73063 0.00039333 -0.15734 -8.4701E-05 0.5733 0.00030863 538.347172195392 542.354218948576 96.675 1.2031 96.675 96.028 97.231 7.6294E-06 337 101 5 0 0 0 8.1721E-07 2 60040 137.18 122.51 1 1.0494 1.0988 0 24168000 10378000 13790000 8611 780 3256 3341 13512;13513 13513 ELIHLLPIK 9 1 0 Unmodified _ELIHLLPIK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.3546 2 538.347335 1074.68012 83600.65 0.70766 0.00038097 -0.10102 -5.4386E-05 0.60664 0.00032658 538.347232598887 542.354231210645 109.26 0.75257 109.26 109.05 109.8 0 131 37 6 0 0 0 1.5452E-05 1 62940 122.13 122.13 1 1.2692 1.0178 0 7518800 3427900 4090900 8612 780 3256 3341 13514 13514 ELIHLLPIK 9 1 0 Unmodified _ELIHLLPIK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.3474 2 538.347335 1074.68012 82911.97 0.63777 0.00034334 0.047331 2.5481E-05 0.6851 0.00036882 538.347257029519 542.354348915383 108.87 0.73897 108.87 108.7 109.43 0 125 33 6 0 0 0 1.3633E-05 2 61728 123.69 123.69 1 1.2674 1.0341 0 6185400 2393000 3792400 8613 780 3256 3341 13515;13516 13516 ELIKPPTILR 10 1 1 Unmodified _ELIKPPTILR_ 0 0 1 Q8NDP0;A0A024QZR5;Q9Y2T2;H0YBA0;E7ER80;E5RJ52;P53677 Q8NDP0 Q8NDP0 DKFZp586G1518;AP3M1;AP3M2 AP-3 complex subunit mu-1;AP-3 complex subunit mu-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.9273 3 393.920174 1178.73869 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.301 1 80.301 79.801 80.801 -7.6294E-06 0 0 0 0.013802 1 47733 51.445 33.626 1 8614 27 3257 3342 13517 13517 ELIKPPTILR 10 1 1 Unmodified _ELIKPPTILR_ 0 0 1 Q8NDP0;A0A024QZR5;Q9Y2T2;H0YBA0;E7ER80;E5RJ52;P53677 Q8NDP0 Q8NDP0 DKFZp586G1518;AP3M1;AP3M2 AP-3 complex subunit mu-1;AP-3 complex subunit mu-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 399.9276 3 393.920174 1178.73869 NaN NaN NaN -0.47396 -0.0001867 NaN NaN NaN NaN 78.849 0.41448 78.849 78.505 78.92 0 0 0 0 0.027895 1 47834 52.49 38.283 1 NaN NaN 0 5061800 0 5061800 8615 27 3257 3342 13518 13518 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.8552 2 718.854438 1435.69432 70891.16 0.8738 0.00062813 -0.25648 -0.00018437 0.61732 0.00044376 718.854697427367 723.8582086675 87.03 1.0158 87.03 86.697 87.713 0 437 87 12 0 0 0 2.9218E-162 4 52450 278.03 264.68 1 0.73534 0.87786 0 3788300000 2247500000 1540800000 8616 1471;1679 3258 3343 13519;13520;13521;13522 13520 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.8557 2 718.854438 1435.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.773 1 87.773 87.273 88.273 7.6294E-06 0 0 0 4.6077E-05 1 52941 109.42 73.085 1 8617 1471;1679 3258 3343 13523 13523 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.858 2 718.854438 1435.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.879 1 89.879 89.379 90.379 0 0 0 0 0.0002114 1 54266 84.658 69.508 1 8618 1471;1679 3258 3343 13524 13524 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.854 2 718.854438 1435.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.215 1 90.215 89.715 90.715 0 0 0 0 0.001138 1 54495 84.658 48.325 1 8619 1471;1679 3258 3343 13525 13525 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.8588 2 718.854438 1435.69432 70703.48 0.94093 0.00067639 -0.39746 -0.00028572 0.54347 0.00039068 718.854777979201 723.858178924618 85.873 1.0662 85.873 85.664 86.73 0 376 85 12 0 0 0 3.9185E-60 2 52843 208.11 197.35 1 0.76132 0.91272 0 4578400000 2548600000 2029800000 8620 1471;1679 3258 3343 13526;13527 13526 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.8604 2 718.854438 1435.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.898 1 86.898 86.398 87.398 0 0 0 0 4.5147E-05 1 53566 93.058 73.271 1 8621 1471;1679 3258 3343 13528 13528 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.8599 2 718.854438 1435.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.906 1 86.906 86.406 87.406 -7.6294E-06 0 0 0 0.00018128 1 53569 86.18 66.394 1 8622 1471;1679 3258 3343 13529 13529 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.8634 2 718.854438 1435.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.294 1 87.294 86.794 87.794 -7.6294E-06 0 0 0 0.0019771 1 53792 68.893 48.564 1 8623 1471;1679 3258 3343 13530 13530 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.8593 2 718.854438 1435.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.375 1 87.375 86.875 87.875 0 0 0 0 0.0037322 1 53842 66.19 45.861 1 8624 1471;1679 3258 3343 13531 13531 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.853 2 718.854438 1435.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.324 1 89.324 88.824 89.824 0 0 0 0 0.00019367 1 55137 96.015 41.598 1 8625 1471;1679 3258 3343 13532 13532 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.8549 2 718.854438 1435.69432 70598.42 0.78649 0.00056537 -0.24955 -0.00017939 0.53694 0.00038598 718.854994589647 723.858430087316 99.001 1.7771 99.001 98.373 100.15 0 766 108 12 0 0 0 1.5706E-05 4 55702 105.4 101.38 1 1.2821 1.1189 0 507560000 222390000 285170000 8626 1471;1679 3258 3343 13533;13534;13535;13536 13534 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.8596 2 718.854438 1435.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.2 1 101.2 100.7 101.7 0 0 0 0 0.00019717 1 57324 85.377 65.048 1 8627 1471;1679 3258 3343 13537 13537 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.8596 2 718.854438 1435.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.74 1 101.74 101.24 102.24 0 0 0 0 0.047669 1 57689 42.802 27.14 1 8628 1471;1679 3258 3343 13538 13538 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.8591 2 718.854438 1435.69432 70389.38 0.72049 0.00051793 -0.18071 -0.0001299 0.53978 0.00038802 718.854942845006 723.858455396629 98.848 1.2635 98.848 98.368 99.631 0 642 80 12 0 0 0 2.1751E-08 4 55291 120.45 113.85 1 1.2764 1.1157 0 480720000 204830000 275890000 8629 1471;1679 3258 3343 13539;13540;13541;13542 13541 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.3607 2 718.854438 1435.69432 NaN NaN NaN -0.38819 -0.00027905 NaN NaN NaN NaN 99.855 0.45638 99.855 99.631 100.09 0 0 0 0 5.6851E-06 2 55586 104.42 90.305 1 NaN NaN 0 3302100 0 3302100 8630 1471;1679 3258 3343 13543;13544 13543 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.8591 2 718.854438 1435.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.96 1 100.96 100.46 101.46 0 0 0 0 0.010913 1 56294 56.548 40.886 1 8631 1471;1679 3258 3343 13545 13545 ELILHNPVTLK 11 1 0 Unmodified _ELILHNPVTLK_ 0 0 0 Q9NY93;H7C3E9;G3V0G3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.8846 2 638.884813 1275.75507 75411.31 0.43777 0.00027968 0.12246 7.8239E-05 0.56023 0.00035792 638.884863790575 642.892048530383 77.069 0.60809 77.069 76.86 77.468 0 219 49 6 0 0 0 0.00045025 1 46563 77.533 77.533 1 0.98003 1.1003 0 55510000 28082000 27428000 8632 2081 3259 3344 13546 13546 ELILHNPVTLK 11 1 0 Unmodified _ELILHNPVTLK_ 0 0 0 Q9NY93;H7C3E9;G3V0G3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.893 2 638.884813 1275.75507 76070.55 0.63395 0.00040502 -0.092164 -5.8882E-05 0.54179 0.00034614 638.884775036907 642.891874073485 89.49 0.62932 89.49 89.249 89.879 0 208 40 8 0 0 0 0.00036959 2 49395 83.862 83.862 1 1.175 0.91192 0 14376000 6474900 7901300 8633 2081 3259 3344 13547;13548 13547 ELILHNPVTLK 11 1 0 Unmodified _ELILHNPVTLK_ 0 0 0 Q9NY93;H7C3E9;G3V0G3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.8922 2 638.884813 1275.75507 76184.52 0.34541 0.00022068 0.0078004 4.9836E-06 0.35321 0.00022566 638.884872583381 642.891968659666 89.201 0.63212 89.201 88.975 89.607 0 189 38 8 0 0 0 9.2193E-05 2 48393 97.472 97.472 1 1.2761 1.0542 0 11926000 5256000 6670200 8634 2081 3259 3344 13549;13550 13549 ELIMGEDPAQPR 12 0 1 Oxidation (M) _ELIM(ox)GEDPAQPR_ ELIM(1)GEDPAQPR ELIM(75.29)GEDPAQPR 0 1 0 Q12873 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3312 2 686.332284 1370.65001 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.076 1 46.076 45.576 46.576 0 0 0 0 0.00038438 1 25372 75.294 47.552 1 8635 1701 3260 3345 13551 13551 1533 ELINNLDADSLR 12 0 1 Unmodified _ELINNLDADSLR_ 0 0 0 B3KPM8;Q8N5C6 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 691.8622 2 686.85698 1371.69941 NaN NaN NaN 0.11575 7.9501E-05 NaN NaN NaN NaN 96.7 0.58894 96.7 96.365 96.954 7.6294E-06 0 0 0 0.0016061 1 53541 76.143 51.289 1 NaN NaN 0 1721400 0 1721400 8636 921 3261 3346 13552 13552 ELIPTEEALR 10 0 1 Unmodified _ELIPTEEALR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.822 2 585.821878 1169.6292 80673.37 0.88088 0.00051604 1.2082 0.00070781 2.0891 0.0012238 585.821680328054 590.825745997579 80.358 0.75682 80.358 80.04 80.797 0 368 64 9 0 0 0 0.0026728 2 47680 68.016 60.866 1 1.5857 1.758 0 65819000 27217000 38602000 8637 1754 3262 3347 13553;13554 13554 ELIPTEEALR 10 0 1 Unmodified _ELIPTEEALR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.822 2 585.821878 1169.6292 79593.17 0.77198 0.00045224 0.93037 0.00054503 1.7023 0.00099727 585.821785222203 590.825834666941 79.352 0.7088 79.352 79.021 79.729 0 338 57 9 0 0 0 4.4984E-05 2 48158 99.139 90.798 1 1.5224 1.7454 0 82354000 33608000 48746000 8638 1754 3262 3347 13555;13556 13556 ELIPTEEALR 10 0 1 Unmodified _ELIPTEEALR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 590.8264 2 585.821878 1169.6292 79504.55 0.62704 0.00036733 0.1873 0.00010973 0.81434 0.00047706 585.821712422672 590.826057966356 91.763 0.58223 91.763 91.506 92.088 0 180 39 6 0 0 0 0.036818 1 50904 40.058 24.798 1 2.1423 1.8393 0 8173300 2815800 5357500 8639 1754 3262 3347 13557 13557 ELIPTEEALR 10 0 1 Unmodified _ELIPTEEALR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.8223 2 585.821878 1169.6292 79812.77 0.44144 0.0002586 0.39492 0.00023135 0.83635 0.00048995 585.821978092791 590.826170424074 91.647 0.56624 91.647 91.371 91.937 0 192 37 7 0 0 0 0.049193 1 50010 36.334 33.8 1 2.2297 1.8567 0 7070300 2021800 5048500 8640 1754 3262 3347 13558 13558 ELIQEYGAQSGGLEK 15 1 0 Unmodified _ELIQEYGAQSGGLEK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.4148 2 811.407034 1620.79952 69168.66 0.51278 0.00041607 -0.25065 -0.00020338 0.26213 0.0002127 811.406775952134 815.413796515229 66.656 0.56438 66.656 66.373 66.937 0 160 43 6 0 0 0 0.00022701 3 38318 74.611 74.611 1 2.0908 2.0563 0 23701000 8678900 15022000 8641 397;1622 3263 3348 13559;13560;13561 13560 ELIQEYGAQSGGLEK 15 1 0 Unmodified _ELIQEYGAQSGGLEK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.415 2 811.407034 1620.79952 68557.66 0.55534 0.0004506 0.025334 2.0556E-05 0.58067 0.00047116 811.406849693135 815.414165841106 65.569 0.52126 65.569 65.324 65.845 0 184 43 6 0 0 0 3.1707E-15 4 38558 130.56 130.56 1 2.0352 2.1727 0 20979000 8216800 12762000 8642 397;1622 3263 3348 13562;13563;13564;13565 13562 ELIQEYGAQSGGLEK 15 1 0 Unmodified _ELIQEYGAQSGGLEK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 815.4151 2 811.407034 1620.79952 68673.5 0.52879 0.00042906 -0.17932 -0.0001455 0.34947 0.00028356 811.406720755735 815.413872478344 76.52 0.51884 76.52 76.308 76.827 0 142 37 5 0 0 0 0.0027968 1 40749 43.897 43.897 1 2.2274 1.75 0 3142100 982390 2159700 8643 397;1622 3263 3348 13566 13566 ELIQEYGAQSGGLEK 15 1 0 Unmodified _ELIQEYGAQSGGLEK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.4068 2 811.407034 1620.79952 68969.23 0.55025 0.00044647 -0.00012649 -1.0264E-07 0.55012 0.00044637 811.406843184434 815.414136565811 76.938 0.44739 76.938 76.718 77.166 0 102 28 5 0 0 0 0.017358 2 40264 32.254 32.254 1 2.4146 1.9508 0 2981400 848910 2132500 8644 397;1622 3263 3348 13567;13568 13568 ELISDNQYR 9 0 1 Unmodified _ELISDNQYR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.2844 2 569.280377 1136.5462 80241.73 0.51598 0.00029374 -0.32745 -0.00018641 0.18853 0.00010733 569.280443135863 574.283936224777 40.152 0.67558 40.152 39.847 40.523 0 188 56 6 0 0 0 0.0022212 1 20876 75.213 62.176 1 1.43 1.5497 0 49604000 20991000 28613000 8645 568 3264 3349 13569 13569 ELISDNQYR 9 0 1 Unmodified _ELISDNQYR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.2849 2 569.280377 1136.5462 79787.37 0.64738 0.00036854 -0.20949 -0.00011926 0.43789 0.00024928 569.280076289697 574.284425621796 39.003 0.56113 39.003 38.748 39.309 0 166 46 6 0 0 0 0.001762 1 20562 81.191 64.988 1 1.2534 1.4378 0 51842000 20704000 31139000 8646 568 3264 3349 13570 13570 ELISDNQYR 9 0 1 Unmodified _ELISDNQYR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.2803 2 569.280377 1136.5462 79577.2 0.37816 0.00021528 -0.60476 -0.00034428 -0.2266 -0.000129 569.279840309821 574.284224558051 46.084 0.50821 46.084 45.875 46.383 0 123 35 5 0 0 0 0.017716 2 21604 52.716 48.823 1 0.91573 0.77597 0 3021100 1712000 1309100 8647 568 3264 3349 13571;13572 13572 ELISFLSEPEILVK 14 1 0 Unmodified _ELISFLSEPEILVK_ 0 0 0 A0A0C4DGW6;A6NDU8 A0A0C4DGW6 A0A0C4DGW6 C5orf51 UPF0600 protein C5orf51 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.9689 2 808.960914 1615.90728 69728.52 1.018 0.00082353 0.29167 0.00023595 1.3097 0.0010595 808.960891792937 812.96857748653 128.78 0.19821 128.78 128.65 128.85 0 29 9 6 0 0 0 1.812E-29 2 83980 152.07 152.07 1 0.95928 0.99123 0 17218000 6620900 10598000 8648 519 3265 3350 13573;13574 13573 ELISFLSEPEILVK 14 1 0 Unmodified _ELISFLSEPEILVK_ 0 0 0 A0A0C4DGW6;A6NDU8 A0A0C4DGW6 A0A0C4DGW6 C5orf51 UPF0600 protein C5orf51 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.9719 2 808.960914 1615.90728 71183.95 0.5168 0.00041807 0.2808 0.00022716 0.79761 0.00064523 809.462531062098 813.469848143331 128.41 0.15121 128.41 128.32 128.47 0 41 9 6 0 0 0 5.8749E-05 2 85810 91.752 91.752 1 2.423 2.466 0 30524000 9310600 21213000 8649 519 3265 3350 13575;13576 13575 ELISLLHLSLLHLEEDK 17 1 0 Unmodified _ELISLLHLSLLHLEEDK_ 0 0 0 A8K8N3;Q96R06;J3KTQ0 A8K8N3 A8K8N3 SPAG5 Sperm-associated antigen 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.718 3 668.045491 2001.11464 77694.72 0.99892 0.00066733 0.22139 0.0001479 1.2203 0.00081523 668.380551009332 670.716777492339 132.39 0.26408 132.39 132.2 132.47 0 37 18 4 0 0 0 0.020024 1 86493 21.233 4.9269 1 0.34039 0.35619 0 3945200 2692300 1252900 8650 779 3266 3351 13577 13577 ELISLLHLSLLHLEEDK 17 1 0 Unmodified _ELISLLHLSLLHLEEDK_ 0 0 0 A8K8N3;Q96R06;J3KTQ0 A8K8N3 A8K8N3 SPAG5 Sperm-associated antigen 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.0529 3 668.045491 2001.11464 77663.41 0.88345 0.00059018 0.89753 0.00059959 1.781 0.0011898 668.380923043395 671.051676365098 132.25 0.36087 132.25 132.09 132.45 0 44 21 4 0 0 0 6.0642E-05 1 88590 49.993 25.952 1 0.45275 0.45803 0 5331400 3523800 1807600 8651 779 3266 3351 13578 13578 ELISNASDALDK 12 1 0 Unmodified _ELISNASDALDK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;F8W026;B4DQX3;Q96GW1;Q5CAQ5;V9HWP2;P14625;Q59FC6 B4DMA2;Q5CAQ5 B4DMA2 HSP90AB1;HSP90B1;TRA1;HEL-S-125m Heat shock protein HSP 90-beta;Endoplasmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.325 2 638.324982 1274.63541 75505.59 0.46478 0.00029668 0.065892 4.2061E-05 0.53067 0.00033874 638.324884922434 642.332060052448 62.262 1.3516 62.262 61.562 62.914 0 659 118 8 0 0 0 3.6232E-13 4 35668 135.55 118.48 1 2.2225 2.5677 0 223880000 67181000 156700000 8652 379;1482 3267 3352 13579;13580;13581;13582 13580 ELISNASDALDK 12 1 0 Unmodified _ELISNASDALDK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;F8W026;B4DQX3;Q96GW1;Q5CAQ5;V9HWP2;P14625;Q59FC6 B4DMA2;Q5CAQ5 B4DMA2 HSP90AB1;HSP90B1;TRA1;HEL-S-125m Heat shock protein HSP 90-beta;Endoplasmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.334 2 638.324982 1274.63541 75469.93 0.585 0.00037342 -0.049285 -3.146E-05 0.53572 0.00034196 638.324843705747 642.332055605286 61.239 1.4733 61.239 60.562 62.036 0 683 136 10 0 0 0 1.5706E-05 4 35631 105.4 92.637 1 2.2421 2.6403 0 483880000 143390000 340490000 8653 379;1482 3267 3352 13583;13584;13585;13586 13583 ELISNASDALDK 12 1 0 Unmodified _ELISNASDALDK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;F8W026;B4DQX3;Q96GW1;Q5CAQ5;V9HWP2;P14625;Q59FC6 B4DMA2;Q5CAQ5 B4DMA2 HSP90AB1;HSP90B1;TRA1;HEL-S-125m Heat shock protein HSP 90-beta;Endoplasmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.827 2 638.324982 1274.63541 76112.05 0.38282 0.00024437 0.16704 0.00010662 0.54986 0.00035099 638.324945591967 642.332178574501 71.751 1.0852 71.751 71.087 72.172 0 450 81 8 0 0 0 0.0060996 3 37628 49.466 44.853 1 1.4275 1.1581 0 26221000 10683000 15538000 8654 379;1482 3267 3352 13587;13588;13589 13587 ELISNASDALDK 12 1 0 Unmodified _ELISNASDALDK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;F8W026;B4DQX3;Q96GW1;Q5CAQ5;V9HWP2;P14625;Q59FC6 B4DMA2;Q5CAQ5 B4DMA2 HSP90AB1;HSP90B1;TRA1;HEL-S-125m Heat shock protein HSP 90-beta;Endoplasmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.3254 2 638.324982 1274.63541 76179.95 0.29435 0.00018789 0.10991 7.0156E-05 0.40426 0.00025805 638.324491869392 642.332243893622 72.311 1.5353 72.311 71.453 72.988 0 502 120 8 0 0 0 0.0045391 4 37268 53.237 42.073 1 1.4041 1.1453 0 25952000 10585000 15367000 8655 379;1482 3267 3352 13590;13591;13592;13593 13592 ELISNSSDALDK 12 1 0 Unmodified _ELISNSSDALDK_ 0 0 0 K9JA46;P07900;Q2VPJ6;G3V2J8;Q14568;B4DTA5;Q86SX1 K9JA46 K9JA46 EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3229 2 646.322439 1290.63033 75940 0.64195 0.00041491 0.82446 0.00053287 1.4664 0.00094778 646.322679763798 650.330315487825 49.138 0.79253 49.138 48.898 49.69 0 237 65 5 0 0 0 0.0018603 1 27517 60.064 40.711 1 2.8411 3.1564 0 50049000 12055000 37994000 8656 1348 3268 3353 13594 13594 ELISNSSDALDK 12 1 0 Unmodified _ELISNSSDALDK_ 0 0 0 K9JA46;P07900;Q2VPJ6;G3V2J8;Q14568;B4DTA5;Q86SX1 K9JA46 K9JA46 EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.3298 2 646.322439 1290.63033 76658.55 0.72348 0.0004676 -0.25549 -0.00016513 0.46799 0.00030247 646.321286251496 650.329514556917 57.874 0.72677 57.874 57.54 58.267 -3.8147E-06 198 54 6 0 0 0 0.0004768 2 29414 70.412 52.1 1 2.1998 1.7349 0 4070000 1221200 2848800 8657 1348 3268 3353 13595;13596 13596 ELISWGAPGSADSTR 15 0 1 Unmodified _ELISWGAPGSADSTR_ 0 0 0 X5CKB3;B2R9F3;A0A140T9T7;A0A0S2Z5A6;Q03518;Q6QWC1;Q6QWC0;O94774 X5CKB3 X5CKB3 TAP1;TAP1*0102N Antigen peptide transporter 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.3837 2 773.878444 1545.74234 NaN NaN NaN 0.28708 0.00022217 NaN NaN NaN NaN 82.843 0.21188 82.843 82.738 82.95 0 0 0 0 0.01681 1 49497 45.077 30.871 1 NaN NaN 0 5989200 0 5989200 8658 578 3269 3354 13597 13597 ELISWGAPGSADSTR 15 0 1 Unmodified _ELISWGAPGSADSTR_ 0 0 0 X5CKB3;B2R9F3;A0A140T9T7;A0A0S2Z5A6;Q03518;Q6QWC1;Q6QWC0;O94774 X5CKB3 X5CKB3 TAP1;TAP1*0102N Antigen peptide transporter 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.8829 2 773.878444 1545.74234 69143.43 0.81706 0.00063231 0.32097 0.00024839 1.138 0.00088069 773.879018020228 778.882698438423 81.881 0.35245 81.881 81.715 82.068 -7.6294E-06 98 31 4 0 0 0 0.00021933 3 50078 62.694 55.294 1 0.66301 0.65479 0 14976000 9675800 5300100 8659 578 3269 3354 13598;13599;13600 13600 ELLADQNLK 9 1 0 Unmodified _ELLADQNLK_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.298 2 522.290214 1042.56587 83795.9 0.15295 7.9885E-05 0.33285 0.00017384 0.4858 0.00025373 522.29033927628 526.297492493306 50.909 0.51662 50.909 50.783 51.299 0 137 46 4 0 0 0 2.9977E-06 1 28113 134.81 52.139 1 1.0967 1.2288 0 64679000 30699000 33980000 8660 1740 3270 3355 13601 13601 ELLADQNLK 9 1 0 Unmodified _ELLADQNLK_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.2905 2 522.290214 1042.56587 83706.17 0.74714 0.00039023 -0.021499 -1.1229E-05 0.72564 0.000379 522.290231273651 526.297253357147 49.921 0.56474 49.921 49.526 50.091 0 146 44 4 0 0 0 1.8622E-05 2 28102 119.41 45.233 1 1.0377 1.152 0 49148000 23878000 25270000 8661 1740 3270 3355 13602;13603 13603 ELLADQNLK 9 1 0 Unmodified _ELLADQNLK_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.2969 2 522.290214 1042.56587 82253.38 0.25888 0.00013521 -0.18303 -9.5597E-05 0.075844 3.9613E-05 522.290220947231 526.297197530479 58.344 1.149 58.344 57.895 59.044 0 355 88 8 0 0 0 0.0057716 2 29659 65.88 20.298 1 1.5023 1.1939 0 19212000 8170000 11042000 8662 1740 3270 3355 13604;13605 13604 ELLADQNLK 9 1 0 Unmodified _ELLADQNLK_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.2901 2 522.290214 1042.56587 83815.69 0.24591 0.00012844 0.054578 2.8505E-05 0.30049 0.00015694 522.290199498387 526.29714773627 58.748 0.93069 58.748 58.495 59.426 0 377 75 8 0 0 0 0.00054206 2 29246 97.798 30.766 1 1.5148 1.2343 0 12883000 5402700 7480200 8663 1740 3270 3355 13606;13607 13606 ELLASAPTGSGK 12 1 0 Unmodified _ELLASAPTGSGK_ 0 0 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.8131 2 565.806228 1129.5979 78566.04 0.36676 0.00020752 -0.15559 -8.8034E-05 0.21117 0.00011948 565.805561629801 569.813383205655 46.935 0.51468 46.935 46.68 47.194 -3.8147E-06 137 38 5 0 0 0 0.0012733 1 22701 61.56 22.597 1 0.97505 0.76518 0 3928700 2048600 1880100 8664 2126 3271 3356 13608 13608 ELLASAPTGSGK 12 1 0 Unmodified _ELLASAPTGSGK_ 0 0 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.8136 2 565.806228 1129.5979 NaN NaN NaN 2.0655 0.0011687 NaN NaN NaN NaN 47.13 1.0221 47.13 46.231 47.253 0 0 0 0 0.0063368 2 22151 60.518 27.298 1 NaN NaN 0 1426500 0 1426500 8665 2126 3271 3356 13609;13610 13609 ELLASAPTGSGK 12 1 0 Unmodified _ELLASAPTGSGK_ 0 0 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.8063 2 565.806228 1129.5979 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.97 1 46.97 46.47 47.47 0 0 0 0 0.023683 1 22175 49.35 12.649 1 8666 2126 3271 3356 13611 13611 ELLDSDSDKPCK 12 2 0 Unmodified _ELLDSDSDKPCK_ 0 0 1 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.828 2 703.827031 1405.63951 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.194 1 25.194 24.694 25.694 0 0 0 0 0.0033288 1 10836 74.162 45.075 1 8667 1224 3272 3357 13612 13612 ELLEEMYEEK 10 1 0 Oxidation (M) _ELLEEM(ox)YEEK_ ELLEEM(1)YEEK ELLEEM(104.2)YEEK 0 1 0 O95235;H0YAC9 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.8 2 664.799951 1327.58535 74566.16 0.76225 0.00050675 -0.66193 -0.00044005 0.10032 6.6692E-05 664.799046217852 668.80709944851 51.362 0.75987 51.362 51.024 51.784 0 237 70 6 0 0 0 5.5085E-06 1 28364 104.2 104.2 1 0.98139 1.0612 0 35631000 17846000 17786000 8668 1421 3273 3358 13613 13613 1115 ELLEEMYEEK 10 1 0 Oxidation (M) _ELLEEM(ox)YEEK_ ELLEEM(1)YEEK ELLEEM(76.68)YEEK 0 1 0 O95235;H0YAC9 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8004 2 664.799951 1327.58535 72406.69 0.62659 0.00041656 0.43904 0.00029187 1.0656 0.00070843 664.800014728405 668.807743608224 50.391 0.59024 50.391 49.964 50.554 0 233 53 6 0 0 0 0.00051831 2 28325 76.679 76.679 1 0.94423 1.0658 0 65141000 33220000 31921000 8669 1421 3273 3358 13614;13615 13614 1115 ELLEEMYEEK 10 1 0 Oxidation (M) _ELLEEM(ox)YEEK_ ELLEEM(1)YEEK ELLEEM(47.71)YEEK 0 1 0 O95235;H0YAC9 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.8077 2 664.799951 1327.58535 73625.51 0.41828 0.00027807 0.33153 0.0002204 0.74981 0.00049848 664.799869256315 668.807637916788 59.243 0.71844 59.243 58.879 59.597 3.8147E-06 301 56 8 0 0 0 0.0086282 1 30196 47.706 46.446 1 0.99493 0.7856 0 6020900 3122200 2898600 8670 1421 3273 3358 13616 13616 1115 ELLEEMYEEK 10 1 0 Oxidation (M) _ELLEEM(ox)YEEK_ ELLEEM(1)YEEK ELLEEM(78.26)YEEK 0 1 0 O95235;H0YAC9 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.8007 2 664.799951 1327.58535 73865.13 0.48695 0.00032372 0.34986 0.00023259 0.83681 0.00055631 664.799678374661 668.807870856142 59.846 0.71026 59.846 59.473 60.183 0 240 52 8 0 0 0 0.00047069 2 29838 78.264 78.264 1 0.92813 0.75704 0 6435600 3272900 3162600 8671 1421 3273 3358 13617;13618 13617 1115 ELLEIVK 7 1 0 Unmodified _ELLEIVK_ 0 0 0 A0A140VJP5;P31153;B4DEX8;B4E1K2;B4DN74;B4DFQ8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.2629 2 422.262936 842.51132 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.2 1 79.2 78.7 79.7 0 0 0 0 0.019227 1 46947 94.163 19.446 1 8672 606 3274 3359 13619 13619 ELLEIVK 7 1 0 Unmodified _ELLEIVK_ 0 0 0 A0A140VJP5;P31153;B4DEX8;B4E1K2;B4DN74;B4DFQ8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.2698 2 422.262936 842.51132 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.795 1 77.795 77.295 78.295 7.6294E-06 0 0 0 0.01505 1 47100 81.381 18.666 1 8673 606 3274 3359 13620 13620 ELLEQISAFDNVPR 14 0 1 Unmodified _ELLEQISAFDNVPR_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.9308 2 815.925394 1629.83624 67186.09 1.1425 0.00093221 0.010124 8.26E-06 1.1526 0.00094047 815.925442966434 820.929508638823 111.59 0.77998 111.59 111.28 112.06 0 356 57 9 0 0 0 1.2097E-37 2 70117 168.3 168.3 1 0.87028 0.97908 0 95901000 52093000 43807000 8674 2079 3275 3360 13621;13622 13621 ELLEQISAFDNVPR 14 0 1 Unmodified _ELLEQISAFDNVPR_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.9291 2 815.925394 1629.83624 67734.39 0.76852 0.00062705 0.10671 8.7065E-05 0.87523 0.00071412 816.427153159495 820.929540600967 111.05 0.72702 111.05 110.79 111.52 -7.6294E-06 331 52 9 0 0 0 1.8397E-46 2 71458 178.67 162.03 1 0.89564 1.0236 0 89464000 50160000 39305000 8675 2079 3275 3360 13623;13624 13623 ELLEQISAFDNVPR 14 0 1 Unmodified _ELLEQISAFDNVPR_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.9299 2 815.925394 1629.83624 67952.21 0.95965 0.000783 0.23847 0.00019457 1.1981 0.00097757 815.925660095634 820.929583374206 122.59 0.89267 122.59 122.3 123.19 7.6294E-06 283 44 10 0 0 0 1.7562E-37 2 73024 164.9 146.77 1 1.1539 0.9951 0 74623000 35640000 38983000 8676 2079 3275 3360 13625;13626 13625 ELLEQISAFDNVPR 14 0 1 Unmodified _ELLEQISAFDNVPR_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.9301 2 815.925394 1629.83624 68028.89 0.99768 0.00081403 0.2622 0.00021394 1.2599 0.001028 815.92565082178 820.929589957529 122.39 0.81544 122.39 122.17 122.99 0 285 40 10 0 0 0 1.3231E-37 2 71981 167.6 157.41 1 1.1528 1.0062 0 92201000 42037000 50163000 8677 2079 3275 3360 13627;13628 13627 ELLESISPALLSYLQEHAQEVVLDK 25 1 0 Unmodified _ELLESISPALLSYLQEHAQEVVLDK_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.506 3 942.170807 2823.49059 63812.02 0.28612 0.00026957 1.2801 0.0012061 1.5662 0.0014756 942.505576808913 945.17887132305 133.41 0.25508 133.41 133.29 133.54 0 34 6 11 0 0 0 1.3379E-12 1 87412 71.696 71.696 1 0.82067 0.92661 0 108510000 57722000 50785000 8678 1761 3276 3361 13629 13629 ELLESISPALLSYLQEHAQEVVLDK 25 1 0 Unmodified _ELLESISPALLSYLQEHAQEVVLDK_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 942.5048 3 942.170807 2823.49059 62701.66 0.22692 0.0002138 0.07959 7.4988E-05 0.30651 0.00028878 942.505226149027 945.176657366261 133.39 0.33052 133.39 133.3 133.63 0 32 7 9 0 0 0 0.00039663 1 89621 32.391 32.391 1 0.70732 0.80615 0 150760000 80640000 70116000 8679 1761 3276 3361 13630 13630 ELLFLSNANPSLLER 15 0 1 Unmodified _ELLFLSNANPSLLER_ 0 0 0 P51398;V9GYW1;V9GYA7;V9GZ61;V9GYF7 P51398 P51398 DAP3 28S ribosomal protein S29, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 858.4698 2 858.469969 1714.92539 68423.91 0.95357 0.00081861 0.0028016 2.4051E-06 0.95637 0.00082102 858.469822426149 863.473996900279 120.05 0.49343 120.05 119.82 120.31 0 151 33 6 0 0 0 3.1008E-10 3 77312 117.23 117.23 1 1.3543 1.3556 0 16927000 8225400 8701200 8680 1594 3277 3362 13631;13632;13633 13632 ELLFLSNANPSLLER 15 0 1 Unmodified _ELLFLSNANPSLLER_ 0 0 0 P51398;V9GYW1;V9GYA7;V9GZ61;V9GYF7 P51398 P51398 DAP3 28S ribosomal protein S29, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.4705 2 858.469969 1714.92539 67792.95 0.77992 0.00066954 -0.050693 -4.3518E-05 0.72923 0.00062602 858.469721522192 863.474047772687 119.56 0.46085 119.56 119.33 119.79 7.6294E-06 163 33 7 0 0 0 1.1511E-05 2 78874 91.858 82.75 1 1.3053 1.2944 0 15838000 8105400 7732500 8681 1594 3277 3362 13634;13635 13635 ELLFLSNANPSLLER 15 0 1 Unmodified _ELLFLSNANPSLLER_ 0 0 0 P51398;V9GYW1;V9GYA7;V9GZ61;V9GYF7 P51398 P51398 DAP3 28S ribosomal protein S29, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 863.4742 2 858.469969 1714.92539 67323.87 0.94977 0.00081535 -0.099141 -8.5109E-05 0.85063 0.00073024 858.971393108698 863.473806154177 132.21 0.40192 132.21 132.02 132.42 0 75 18 7 0 0 0 6.9543E-05 2 80359 84.289 84.289 1 1.476 1.281 0 2406300 838150 1568100 8682 1594 3277 3362 13636;13637 13636 ELLFLSNANPSLLER 15 0 1 Unmodified _ELLFLSNANPSLLER_ 0 0 0 P51398;V9GYW1;V9GYA7;V9GZ61;V9GYF7 P51398 P51398 DAP3 28S ribosomal protein S29, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 859.4393 2 858.469969 1714.92539 66799.54 1.0222 0.00087752 0.65113 0.00055898 1.6733 0.0014365 858.972168526174 863.47441160624 131.97 0.59897 131.97 131.65 132.25 0 93 25 7 0 0 0 0.00049803 3 79310 56.205 56.205 1 1.2449 1.0893 0 3561900 1612400 1949500 8683 1594 3277 3362 13638;13639;13640 13639 ELLGQGLLLR 10 0 1 Unmodified _ELLGQGLLLR_ 0 0 0 A0A024QYX7;B3KNZ4;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B4DVQ5;A1KYQ7;A0A024QYU9;Q99613;B5ME19 A0A024QYX7 A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.3493 2 556.345323 1110.67609 NaN NaN NaN 0.0089947 5.0042E-06 NaN NaN NaN NaN 107.34 0.5111 107.34 107.15 107.66 0 0 0 0 0.0090986 1 66854 64.265 31.655 1 NaN NaN 0 3147100 0 3147100 8684 6 3278 3363 13641 13641 ELLGQGLLLR 10 0 1 Unmodified _ELLGQGLLLR_ 0 0 0 A0A024QYX7;B3KNZ4;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B4DVQ5;A1KYQ7;A0A024QYU9;Q99613;B5ME19 A0A024QYX7 A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.3453 2 556.345323 1110.67609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.49 1 107.49 106.99 107.99 0 0 0 0 0.02603 1 66946 51.854 26.932 1 8685 6 3278 3363 13642 13642 ELLGQGLLLR 10 0 1 Unmodified _ELLGQGLLLR_ 0 0 0 A0A024QYX7;B3KNZ4;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B4DVQ5;A1KYQ7;A0A024QYU9;Q99613;B5ME19 A0A024QYX7 A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.3455 2 556.345323 1110.67609 84088.93 0.8179 0.00045503 -0.38493 -0.00021415 0.43297 0.00024088 556.344920991314 561.349260848956 106.7 0.49782 106.7 106.47 106.97 0 90 39 4 0 0 0 0.012387 2 67941 50.703 22.485 1 2.561 2.583 0 6164600 1754800 4409800 8686 6 3278 3363 13643;13644 13644 ELLIFNK 7 1 0 Unmodified _ELLIFNK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.763 2 438.763104 875.511654 90311.35 0.24168 0.00010604 0.0070761 3.1047E-06 0.24876 0.00010914 438.763039521193 442.77004764522 84.851 1.2988 84.851 84.413 85.711 0 490 108 8 0 0 0 0.02838 3 51210 72.021 22.352 1 0.6723 0.78045 0 245650000 141490000 104160000 8687 139 3279 3364 13645;13646;13647 13647 ELLIFNK 7 1 0 Unmodified _ELLIFNK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 438.7627 2 438.763104 875.511654 90620.76 0.4785 0.00020995 -0.01408 -6.1778E-06 0.46442 0.00020377 438.762983572343 442.770034750653 83.88 1.4259 83.88 83.185 84.611 0 452 113 8 0 0 0 0.014352 2 51522 100.27 27.713 1 0.69934 0.81877 0 306590000 196780000 109810000 8688 139 3279 3364 13648;13649 13649 ELLIFNK 7 1 0 Unmodified _ELLIFNK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 438.763 2 438.763104 875.511654 88275.65 0.18811 8.2534E-05 0.192 8.4244E-05 0.38011 0.00016678 438.76305315237 442.770123204195 96.169 1.8597 96.169 95.633 97.493 0 458 109 8 0 0 0 0.036835 1 54170 61.123 18.076 1 1.1076 0.89712 0 24032000 11560000 12472000 8689 139 3279 3364 13650 13650 ELLIIGGVAAR 11 0 1 Unmodified _ELLIIGGVAAR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.3493 2 556.345323 1110.67609 NaN NaN NaN 0.0021402 1.1907E-06 NaN NaN NaN NaN 99.337 1.0577 99.337 98.901 99.958 0 0 0 0 2.4522E-05 1 60630 102.51 47.964 1 NaN NaN 0 13846000 0 13846000 8690 452 3280 3365 13651 13651 ELLIIGGVAAR 11 0 1 Unmodified _ELLIIGGVAAR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.3489 2 556.345323 1110.67609 NaN NaN NaN 0.037762 2.1009E-05 NaN NaN NaN NaN 98.397 1.0694 98.397 98.103 99.173 0 0 0 0 0.00042695 1 61443 90.657 36.107 1 NaN NaN 0 28790000 0 28790000 8691 452 3280 3365 13652 13652 ELLIIGGVAAR 11 0 1 Unmodified _ELLIIGGVAAR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.3452 2 556.345323 1110.67609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.801 1 98.801 98.301 99.301 0 0 0 0 0.00076242 1 61859 71.379 34.984 1 8692 452 3280 3365 13653 13653 ELLIIGGVAAR 11 0 1 Unmodified _ELLIIGGVAAR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.3492 2 556.345323 1110.67609 81832.44 0.76923 0.00042796 0.57301 0.00031879 1.3422 0.00074675 556.345759658833 561.349349689802 111.73 0.521 111.73 111.43 111.95 0 112 30 6 0 0 0 0.00099205 2 64705 70.919 37.122 1 1.3457 1.131 0 4367600 1964100 2403600 8693 452 3280 3365 13654;13655 13654 ELLIIGGVAAR 11 0 1 Unmodified _ELLIIGGVAAR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.3456 2 556.345323 1110.67609 81584.96 0.63033 0.00035068 0.37987 0.00021134 1.0102 0.00056202 556.345783339102 561.349402544571 111.48 0.493 111.48 111.24 111.73 0 87 27 4 0 0 0 0.0015886 2 63643 66.351 27.024 1 1.2213 1.057 0 4346200 2053700 2292500 8694 452 3280 3365 13656;13657 13657 ELLIQIFSTPR 11 0 1 Unmodified _ELLIQIFSTPR_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8867 2 658.88227 1315.74999 74590.34 0.93013 0.00061285 0.29017 0.00019119 1.2203 0.00080404 658.882298985563 663.886667763629 121.33 0.89888 121.33 120.98 121.88 0 343 59 9 0 0 0 8.8999E-17 3 78204 155.42 137.56 1 0.95769 1.1071 0 161460000 85350000 76115000 8695 1934 3281 3366 13658;13659;13660 13659 ELLIQIFSTPR 11 0 1 Unmodified _ELLIQIFSTPR_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8876 2 658.88227 1315.74999 74831.7 0.95801 0.00063122 0.53148 0.00035018 1.4895 0.0009814 658.882455221396 663.88679307925 120.76 0.87863 120.76 120.47 121.34 0 347 57 10 0 0 0 2.6875E-23 2 79693 172.59 157.73 1 0.94506 1.0847 0 186190000 95046000 91144000 8696 1934 3281 3366 13661;13662 13662 ELLIQIFSTPR 11 0 1 Unmodified _ELLIQIFSTPR_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.8826 2 658.88227 1315.74999 74204.9 0.8113 0.00053455 0.24768 0.00016319 1.059 0.00069774 658.882333741727 663.886502377479 133.55 1.0151 133.55 133.17 134.18 0 242 43 10 0 0 0 2.7555E-05 1 81278 101.97 101.97 1 1.3602 1.1676 0 42811000 17307000 25504000 8697 1934 3281 3366 13663 13663 ELLIQIFSTPR 11 0 1 Unmodified _ELLIQIFSTPR_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.8835 2 658.88227 1315.74999 74127.2 1.097 0.00072276 0.1538 0.00010133 1.2508 0.0008241 658.88226549248 663.886406376561 133.3 0.93324 133.3 132.95 133.88 0 209 38 9 0 0 0 1.4137E-05 2 80163 107.21 107.21 1 1.2916 1.1266 0 36809000 16304000 20505000 8698 1934 3281 3366 13664;13665 13665 ELLITDLLPDNR 12 0 1 Unmodified _ELLITDLLPDNR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.8988 2 706.393199 1410.77184 73252.05 1.1224 0.00079284 0.098344 6.947E-05 1.2207 0.00086231 706.393018499188 711.39733555616 121.69 0.61105 121.69 121.34 121.95 0 190 39 7 0 0 0 0.00014745 1 78571 109.42 89.115 1 0.90484 0.90406 0 16766000 8323600 8442000 8699 836;1683 3282 3367 13666 13666 ELLITDLLPDNR 12 0 1 Unmodified _ELLITDLLPDNR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3979 2 706.393199 1410.77184 72524.83 1.0623 0.00075038 0.080315 5.6734E-05 1.1426 0.00080711 706.393139302766 711.397257318686 121.23 0.57561 121.23 120.92 121.5 0 166 36 8 0 0 0 3.63E-08 3 80155 140.49 121.17 1 0.98691 1.0347 0 22826000 11732000 11094000 8700 836;1683 3282 3367 13667;13668;13669 13668 ELLITDLLPDNR 12 0 1 Unmodified _ELLITDLLPDNR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.3931 2 706.393199 1410.77184 72389.39 0.93713 0.00066199 -0.17932 -0.00012667 0.75781 0.00053531 706.392822041873 711.397167886597 133.84 0.4933 133.84 133.59 134.08 0 102 19 8 0 0 0 4.1619E-08 2 81560 132.91 115.05 1 1.0906 0.92392 0 5029500 2563400 2466200 8701 836;1683 3282 3367 13670;13671 13671 ELLITDLLPDNR 12 0 1 Unmodified _ELLITDLLPDNR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.3972 2 706.393199 1410.77184 72844.01 1.1186 0.00079019 -0.27983 -0.00019767 0.83881 0.00059253 706.894404922566 711.397168017137 133.59 0.61143 133.59 133.33 133.95 0 91 24 6 0 0 0 2.3868E-05 2 80441 116.23 98.797 1 1.0655 0.88681 0 6185200 2110800 4074400 8702 836;1683 3282 3367 13672;13673 13673 ELLITDLLPDNRK 13 1 1 Unmodified _ELLITDLLPDNRK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.9697 3 513.962879 1538.86681 85812.54 0.5182 0.00026634 -0.18807 -9.6661E-05 0.33013 0.00016968 513.962776322696 519.97026033987 109.51 0.60351 109.51 109.17 109.77 0 195 45 7 0 0 0 0.0078834 2 68359 33.273 33.273 1 1.0428 1.2188 0 31729000 19974000 11754000 8703 836;1683 3283 3368 13674;13675 13674 ELLITDLLPDNRK 13 1 1 Unmodified _ELLITDLLPDNRK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.4521 2 770.44068 1538.86681 NaN NaN NaN -0.71088 -0.00054769 NaN NaN NaN NaN 109.43 0.604 109.43 109.15 109.76 -7.6294E-06 0 0 0 0.0061755 1 68388 55.353 43.621 1 NaN NaN 0 10378000 0 10378000 8704 836;1683 3283 3368 13676 13676 ELLITDLLPDNRK 13 1 1 Unmodified _ELLITDLLPDNRK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.2971 3 513.962879 1538.86681 84678.05 0.45604 0.00023439 -0.11304 -5.8097E-05 0.343 0.00017629 513.962735489774 519.970226750886 108.77 0.62063 108.77 108.42 109.04 0 180 43 6 0 0 0 0.00057496 2 69522 54.343 54.343 1 1.1095 1.2821 0 31368000 14228000 17140000 8705 836;1683 3283 3368 13677;13678 13678 ELLITDLLPDNRK 13 1 1 Unmodified _ELLITDLLPDNRK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.4419 2 770.44068 1538.86681 69561.08 0.66866 0.00051516 -0.075851 -5.8439E-05 0.59281 0.00045672 770.942568305905 779.451893549096 108.76 0.51498 108.76 108.45 108.97 0 132 35 5 0 0 0 2.6722E-13 1 69593 129.16 129.16 1 1.039 1.1917 0 23820000 12413000 11407000 8706 836;1683 3283 3368 13679 13679 ELLITDLLPDNRK 13 1 1 Unmodified _ELLITDLLPDNRK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.4408 2 770.44068 1538.86681 70725.78 0.74951 0.00057746 0.1561 0.00012027 0.90562 0.00069773 770.942775710762 779.451813481563 120.04 0.49675 120.04 119.82 120.32 -7.6294E-06 82 21 6 0 0 0 0.0055923 1 71208 54.259 54.259 1 0.99339 0.82942 0 6396700 3210300 3186400 8707 836;1683 3283 3368 13680 13680 ELLITDLLPDNRK 13 1 1 Unmodified _ELLITDLLPDNRK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.9634 3 513.962879 1538.86681 83972.52 0.47545 0.00024436 0.038907 1.9997E-05 0.51436 0.00026436 513.962789495117 519.970295355784 120.04 0.44739 120.04 119.82 120.27 0 94 19 8 0 0 0 0.037243 1 71286 19.578 19.578 1 1.0439 0.87882 0 7368300 3279900 4088400 8708 836;1683 3283 3368 13681 13681 ELLLPNWQGSGSHGLTIAQR 20 0 1 Unmodified _ELLLPNWQGSGSHGLTIAQR_ 0 0 0 Q09666;B4DTV0;E9PQE3;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.7232 3 726.38691 2176.1389 71354.56 0.81488 0.00059192 0.1734 0.00012595 0.98828 0.00071787 726.721176867702 730.057402579928 104.69 0.62556 104.69 104.35 104.98 7.6294E-06 250 52 7 0 0 0 5.1644E-08 2 64578 85.974 85.974 1 1.2631 1.3006 0 19712000 9304400 10408000 8709 1696 3284 3369 13682;13683 13683 ELLLPNWQGSGSHGLTIAQR 20 0 1 Unmodified _ELLLPNWQGSGSHGLTIAQR_ 0 0 0 Q09666;B4DTV0;E9PQE3;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.0577 3 726.38691 2176.1389 71132.94 0.30557 0.00022196 0.57335 0.00041647 0.87892 0.00063844 726.721601792473 730.057443954368 103.73 0.54825 103.73 103.43 103.98 0 259 47 8 0 0 0 2.9931E-13 2 65562 103.41 103.41 1 1.3361 1.4486 0 27752000 11959000 15794000 8710 1696 3284 3369 13684;13685 13685 ELLLPNWQGSGSHGLTIAQR 20 0 1 Unmodified _ELLLPNWQGSGSHGLTIAQR_ 0 0 0 Q09666;B4DTV0;E9PQE3;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.722 3 726.38691 2176.1389 70405.1 1.1992 0.00087112 0.25323 0.00018395 1.4525 0.0010551 726.721379490217 730.057390665397 115.62 0.35728 115.62 115.46 115.82 -7.6294E-06 92 17 9 0 0 0 6.4208E-05 1 67792 37.237 37.237 1 0.98419 0.84488 0 8209500 4476600 3732800 8711 1696 3284 3369 13686 13686 ELLLQPVTISR 11 0 1 Unmodified _ELLLQPVTISR_ 0 0 0 F8WDD7;F8WCF6;A0A0A6YYG9;P59998;Q9H7Z5;H7C0A3 F8WDD7 F8WDD7 ARPC4;ARPC4-TTLL3 Actin-related protein 2/3 complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.887 2 634.88227 1267.74999 78839.16 0.70687 0.00044878 -0.051717 -3.2835E-05 0.65516 0.00041595 634.881969136997 639.886581469805 100.77 0.65321 100.77 100.35 101.01 -7.6294E-06 148 46 5 0 0 0 0.00038966 1 61799 82.287 63.193 1 1.82 1.8805 0 13912000 5337500 8574600 8712 492 3285 3370 13687 13687 ELLLSAIDSVNATSK 15 1 0 Unmodified _ELLLSAIDSVNATSK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.9354 2 780.927603 1559.84065 68192.02 0.69188 0.00054031 -0.046 -3.5922E-05 0.64588 0.00050439 780.927637791301 784.934716663475 107.99 0.9571 107.99 107.58 108.53 7.6294E-06 489 71 10 0 0 0 4.7557E-22 2 67153 144.57 92.646 1 1.0657 1.2139 0 171380000 84114000 87264000 8713 1570 3286 3371 13688;13689 13689 ELLLSAIDSVNATSK 15 1 0 Unmodified _ELLLSAIDSVNATSK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.936 2 780.927603 1559.84065 69033.83 0.85381 0.00066676 -0.23029 -0.00017984 0.62352 0.00048692 780.927490641823 784.934547617085 107.33 0.97388 107.33 107 107.97 0 427 66 10 0 0 0 7.2858E-22 3 68353 141.38 80.862 1 1.0915 1.2547 0 173420000 79941000 93483000 8714 1570 3286 3371 13690;13691;13692 13691 ELLLSAIDSVNATSK 15 1 0 Unmodified _ELLLSAIDSVNATSK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.9277 2 780.927603 1559.84065 69075.59 0.96997 0.00075748 0.46567 0.00036365 1.4356 0.0011211 781.429351262429 784.934992005605 119.25 0.91849 119.25 119 119.92 7.6294E-06 210 41 10 0 0 0 1.3813E-30 2 70517 157.03 96.924 1 1.169 1.0056 0 89855000 35369000 54486000 8715 1570 3286 3371 13693;13694 13694 ELLLSAIDSVNATSK 15 1 0 Unmodified _ELLLSAIDSVNATSK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.9357 2 780.927603 1559.84065 68977.51 0.75218 0.0005874 0.26982 0.00021071 1.022 0.00079811 780.927737913145 784.934885932912 119.08 0.93215 119.08 118.79 119.72 0 193 40 10 0 0 0 1.2629E-08 2 69450 112.44 62.145 1 1.2106 1.0282 0 72694000 32628000 40066000 8716 1570 3286 3371 13695;13696 13695 ELLNETEEEINK 12 1 0 Unmodified _ELLNETEEEINK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 734.8704 2 730.859386 1459.70422 69527.78 0.71163 0.0005201 0.44775 0.00032724 1.1594 0.00084734 730.859958362788 734.867185755237 73.963 0.5758 73.963 73.663 74.239 0 245 38 9 0 0 0 0.00086033 2 39122 64.73 64.73 1 0.9612 0.76865 0 7066300 3604300 3462000 8717 696 3287 3372 13697;13698 13697 ELLNPVVEFVSHPSTTCR 18 0 1 Unmodified _ELLNPVVEFVSHPSTTCR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.3568 3 695.685968 2084.03607 72120.66 1.0812 0.0007522 -0.289 -0.00020105 0.79223 0.00055115 696.020125907935 699.356314596956 108.56 0.6746 108.56 108.19 108.87 7.6294E-06 349 47 10 0 0 0 0.00010883 1 67669 46.159 46.159 1 0.59542 0.63954 0 46912000 29036000 17876000 8718 1665 3288 3373 13699 13699 ELLNPVVEFVSHPSTTCR 18 0 1 Unmodified _ELLNPVVEFVSHPSTTCR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.6862 3 695.685968 2084.03607 72139.8 0.82752 0.00057569 -0.54987 -0.00038254 0.27765 0.00019316 695.685785303509 699.021753760539 107.65 0.66061 107.65 107.37 108.03 0 322 47 9 0 0 0 8.6086E-06 2 68764 67.645 67.645 1 0.62451 0.70689 0 47804000 28465000 19338000 8719 1665 3288 3373 13700;13701 13701 ELLNPVVEFVSHPSTTCR 18 0 1 Unmodified _ELLNPVVEFVSHPSTTCR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1043.5277 2 1043.02531 2084.03607 59808.29 0.55281 0.00057659 -0.3901 -0.00040689 0.1627 0.0001697 1043.02469033779 1048.52969432794 107.7 0.31647 107.7 107.52 107.84 0 47 22 4 0 0 0 0.034728 1 68730 29.689 29.689 1 0.72427 0.72544 0 6824300 4394200 2430000 8720 1665 3288 3373 13702 13702 ELLNPVVEFVSHPSTTCR 18 0 1 Unmodified _ELLNPVVEFVSHPSTTCR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.0206 3 695.685968 2084.03607 72557.04 0.76047 0.00052905 -0.25156 -0.00017501 0.50891 0.00035404 696.020141755215 699.021625623912 119.19 0.81828 119.19 118.74 119.56 7.6294E-06 174 35 10 0 0 0 8.5481E-05 3 70474 47.09 47.09 1 0.27111 0.22978 0 32124000 24554000 7570100 8721 1665 3288 3373 13703;13704;13705 13703 ELLNPVVEFVSHPSTTCR 18 0 1 Unmodified _ELLNPVVEFVSHPSTTCR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1043.528 2 1043.02531 2084.03607 NaN NaN NaN -0.56301 -0.00058723 NaN NaN NaN NaN 119.19 0.2693 119.19 119.07 119.33 7.6294E-06 0 0 0 0.023949 1 70543 37.013 31.519 1 NaN NaN 0 2381400 2381400 0 8722 1665 3288 3373 13706 13706 ELLNPVVEFVSHPSTTCR 18 0 1 Unmodified _ELLNPVVEFVSHPSTTCR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.0209 3 695.685968 2084.03607 72086.95 0.78376 0.00054525 -0.01363 -9.482E-06 0.77013 0.00053577 696.020277087232 699.356504832214 118.9 0.57015 118.9 118.63 119.2 0 163 24 11 0 0 0 3.3524E-06 3 69348 79.311 79.311 1 0.29656 0.25869 0 26856000 20193000 6662700 8723 1665 3288 3373 13707;13708;13709 13707 ELLNPVVEFVSHPSTTCR 18 0 1 Unmodified _ELLNPVVEFVSHPSTTCR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1043.5295 2 1043.02531 2084.03607 NaN NaN NaN 0.13233 0.00013802 NaN NaN NaN NaN 118.89 0.33141 118.89 118.73 119.06 0 0 0 0 0.0021003 1 69436 52.265 46.033 1 NaN NaN 0 3966600 3966600 0 8724 1665 3288 3373 13710 13710 ELLPLIYHHLLR 12 0 1 Unmodified _ELLPLIYHHLLR_ 0 0 0 E7ETY2;B4DLB1;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.6417 3 506.304799 1515.89257 82695.45 0.86185 0.00043636 0.2166 0.00010967 1.0785 0.00054603 506.304938316681 509.641045024561 114 0.8744 114 113.66 114.53 0 117 38 5 0 0 0 0.0039991 2 66437 44.612 44.612 1 1.9643 1.6454 0 4009400 1083900 2925600 8725 1712;1225 3289 3374 13711;13712 13711 ELLPLIYHHLLR 12 0 1 Unmodified _ELLPLIYHHLLR_ 0 0 0 E7ETY2;B4DLB1;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.9757 3 506.304799 1515.89257 84330.18 0.48147 0.00024377 0.16016 8.1091E-05 0.64163 0.00032486 506.639213636166 509.641110685489 113.47 1.0748 113.47 113.22 114.3 7.6294E-06 135 49 6 0 0 0 0.0074925 1 65193 36.847 36.847 1 1.937 1.6141 0 6878500 2675500 4203100 8726 1712;1225 3289 3374 13713 13713 ELLQDIGDTLSR 12 0 1 Unmodified _ELLQDIGDTLSR_ 0 0 0 P14373;Q59EC6 P14373 P14373 TRIM27 Zinc finger protein RFP ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.3564 2 680.359356 1358.70416 NaN NaN NaN 0.72708 0.00049468 NaN NaN NaN NaN 102.08 0.097496 102.08 101.99 102.09 0 0 0 0 4.3015E-08 1 62770 105.98 42.41 1 NaN NaN 0 7083200 7083200 0 8727 1480 3290 3375 13714 13714 ELLQDIGDTLSR 12 0 1 Unmodified _ELLQDIGDTLSR_ 0 0 0 P14373;Q59EC6 P14373 P14373 TRIM27 Zinc finger protein RFP ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.3635 2 680.359356 1358.70416 NaN NaN NaN -0.0047134 -3.2068E-06 NaN NaN NaN NaN 101.19 0.51395 101.19 100.94 101.46 0 0 0 0 0.0015779 1 63619 76.465 37.317 1 NaN NaN 0 8337500 0 8337500 8728 1480 3290 3375 13715 13715 ELLQESALIR 10 0 1 Unmodified _ELLQESALIR_ 0 0 0 Q5CAQ4;I3L0K7;K0A7K7;Q9BV61;Q59EK6;Q53G55;Q53FS6;A0A140VJY2;Q12931;I3L239;Q8N9Z3 Q5CAQ4 Q5CAQ4 TRAP1 Heat shock protein 75 kDa, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.3409 2 586.337695 1170.66084 89717.85 0.91003 0.00053358 -1.1109 -0.00065137 -0.20089 -0.00011779 586.336916712764 591.34089355284 85.149 0.33733 85.149 84.92 85.257 7.6294E-06 56 27 4 0 0 0 0.0015298 1 51043 73.233 44.072 1 1.8455 1.8656 0 7704600 1957800 5746800 8729 612 3291 3376 13716 13716 ELLQESALIR 10 0 1 Unmodified _ELLQESALIR_ 0 0 0 Q5CAQ4;I3L0K7;K0A7K7;Q9BV61;Q59EK6;Q53G55;Q53FS6;A0A140VJY2;Q12931;I3L239;Q8N9Z3 Q5CAQ4 Q5CAQ4 TRAP1 Heat shock protein 75 kDa, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.3414 2 586.337695 1170.66084 88320.41 0.85314 0.00050023 -0.20287 -0.00011895 0.65026 0.00038127 586.337573458421 591.341267853377 84.09 0.30058 84.09 83.912 84.212 0 47 24 4 0 0 0 0.020901 1 51590 46.462 22.432 1 2.2129 2.2208 0 6718700 1658400 5060200 8730 612 3291 3376 13717 13717 ELLTEFGYK 9 1 0 Unmodified _ELLTEFGYK_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.2952 2 550.28714 1098.55973 81158.41 0.78618 0.00043263 0.27002 0.00014859 1.0562 0.00058121 550.28708938747 554.294205742369 86.627 0.88867 86.627 86.231 87.12 0 285 64 7 0 0 0 1.8757E-05 3 52062 119.29 79.188 1 1.8138 2.0254 0 62733000 20521000 42211000 8731 1580 3292 3377 13718;13719;13720 13719 ELLTEFGYK 9 1 0 Unmodified _ELLTEFGYK_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.2881 2 550.28714 1098.55973 81011.07 0.72833 0.00040079 0.038044 2.0935E-05 0.76638 0.00042173 550.287060903522 554.29398061987 85.834 0.88678 85.834 85.241 86.128 0 334 68 7 0 0 0 1.8757E-05 2 52694 119.29 74.844 1 1.8845 2.1062 0 97108000 35611000 61497000 8732 1580 3292 3377 13721;13722 13722 ELLTEFGYK 9 1 0 Unmodified _ELLTEFGYK_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.2873 2 550.28714 1098.55973 NaN NaN NaN 0.33569 0.00018473 NaN NaN NaN NaN 98.699 0.73795 98.699 98.534 99.272 -7.6294E-06 0 0 0 0.028466 1 55715 53.968 33.413 1 NaN NaN 0 1142800 1142800 0 8733 1580 3292 3377 13723 13723 ELLTLDEK 8 1 0 Unmodified _ELLTLDEK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.7662 2 480.76604 959.517527 87078.8 0.26465 0.00012723 0.030208 1.4523E-05 0.29486 0.00014176 480.766065725246 484.773008557684 65.882 1.5924 65.882 65.416 67.009 0 773 136 9 0 0 0 0.00099112 3 37866 119.29 27.228 1 0.87743 1.0389 0 443040000 234340000 208690000 8734 157 3293 3378 13724;13725;13726 13725 ELLTLDEK 8 1 0 Unmodified _ELLTLDEK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7731 2 480.76604 959.517527 86928.62 0.1132 5.4424E-05 0.091267 4.3878E-05 0.20447 9.8303E-05 480.766117138445 484.773010092101 64.705 1.5463 64.705 64.215 65.761 0 770 132 10 0 0 0 0.0014375 4 38339 109.01 34.528 1 0.91838 1.0816 0 494560000 249620000 244950000 8735 157 3293 3378 13727;13728;13729;13730 13729 ELLTLDEK 8 1 0 Unmodified _ELLTLDEK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.7736 2 480.76604 959.517527 84877.84 0.25937 0.0001247 0.20008 9.6192E-05 0.45945 0.00022089 480.766152596848 484.773112184566 74.947 2.3429 74.947 74.367 76.71 0 652 168 9 0 0 0 0.016751 3 39689 60.895 12.799 1 0.84729 0.72733 0 81960000 44826000 37135000 8736 157 3293 3378 13731;13732;13733 13731 ELLTLDEK 8 1 0 Unmodified _ELLTLDEK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.7732 2 480.76604 959.517527 85978.28 0.19651 9.4474E-05 0.26107 0.00012551 0.45758 0.00021999 480.766146104984 484.773163455905 75.255 1.6555 75.255 74.935 76.59 -7.6294E-06 591 116 9 0 0 0 0.0087497 3 39094 77.282 15.158 1 0.82821 0.70362 0 74048000 37811000 36237000 8737 157 3293 3378 13734;13735;13736 13734 ELLTLDEKDPR 11 1 1 Unmodified _ELLTLDEKDPR_ 0 0 1 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.8684 2 664.856449 1327.69835 74242.67 0.40773 0.00027108 0.59989 0.00039884 1.0076 0.00066992 664.856377729797 673.868242036778 64.247 0.96037 64.247 63.716 64.676 0 236 74 6 0 0 0 0.025323 1 33010 57.55 38.455 1 1.2879 1.0617 0 5279400 2457000 2822300 8738 157 3294 3379 13737 13737 ELLTSFGPLK 10 1 0 Unmodified _ELLTSFGPLK_ 0 0 0 K7ENG2;B5BU25;P26368 K7ENG2 K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.8188 2 552.818607 1103.62266 81334.23 0.66297 0.0003665 -0.031584 -1.746E-05 0.63139 0.00034904 552.818736715491 556.825765769717 101.53 0.85636 101.53 101.16 102.01 0 173 66 4 0 0 0 0.007051 1 62292 57.96 57.96 1 1.1716 1.2057 0 12902000 5950500 6951400 8739 1074 3295 3380 13738 13738 ELLTSFGPLK 10 1 0 Unmodified _ELLTSFGPLK_ 0 0 0 K7ENG2;B5BU25;P26368 K7ENG2 K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.819 2 552.818607 1103.62266 81851.97 0.48568 0.00026849 0.15392 8.5092E-05 0.6396 0.00035358 552.818613401515 556.825819816705 100.76 0.76368 100.76 100.47 101.23 0 188 59 5 0 0 0 0.00076782 1 63285 81.548 60.02 1 1.1812 1.2024 0 12415000 6636400 5779000 8740 1074 3295 3380 13739 13739 ELMGEEILGASLSAPLTSYK 20 1 0 Oxidation (M) _ELM(ox)GEEILGASLSAPLTSYK_ ELM(1)GEEILGASLSAPLTSYK ELM(63.19)GEEILGASLSAPLTSYK 0 1 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1067.5494 2 1063.0403 2124.06604 NaN NaN NaN -0.25067 -0.00026648 NaN NaN NaN NaN 118.06 0.44159 118.06 117.87 118.32 0 0 0 0 1.0458E-05 1 75823 63.185 57.579 1 NaN NaN 0 4492100 0 4492100 8741 883 3296 3381 13740 13740 696 ELMGEEILGASLSAPLTSYK 20 1 0 Oxidation (M) _ELM(ox)GEEILGASLSAPLTSYK_ ELM(1)GEEILGASLSAPLTSYK ELM(86.47)GEEILGASLSAPLTSYK 0 1 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1067.5487 2 1063.0403 2124.06604 NaN NaN NaN -0.51775 -0.00055039 NaN NaN NaN NaN 117.61 0.40287 117.61 117.44 117.85 7.6294E-06 0 0 0 9.4393E-11 3 77105 86.467 73.267 1 NaN NaN 0 6858500 0 6858500 8742 883 3296 3381 13741;13742;13743 13741 696 ELMGFSK 7 1 0 Oxidation (M) _ELM(ox)GFSK_ ELM(1)GFSK ELM(51.79)GFSK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.2024 2 414.202021 826.38949 93919.16 0.2208 9.1455E-05 0.2266 9.3857E-05 0.4474 0.00018531 414.202127480099 418.209096344234 29.624 0.4376 29.624 29.291 29.729 0 150 35 6 0 0 0 0.027686 1 14228 51.787 18.049 1 1.036 1.1703 0 106900000 50356000 56548000 8743 2070 3297 3382 13744 13744 1898 ELMGFSK 7 1 0 Oxidation (M) _ELM(ox)GFSK_ ELM(1)GFSK ELM(51.79)GFSK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.2014 2 414.202021 826.38949 93805.34 0.3408 0.00014116 0.52697 0.00021827 0.86777 0.00035943 414.202427916215 418.208967582029 29.14 0.37188 29.14 28.899 29.271 0 85 26 6 0 0 0 0.027686 1 13932 51.787 18.049 1 0.99002 1.1066 0 100160000 51116000 49042000 8744 2070 3297 3382 13745 13745 1898 ELNEDKLEK 9 2 0 Unmodified _ELNEDKLEK_ 0 0 1 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.3049 2 559.290411 1116.56627 80790.29 0.29351 0.00016416 0.16809 9.401E-05 0.4616 0.00025817 559.290614093019 567.30475044053 22.763 0.63107 22.763 22.597 23.228 -1.9073E-06 131 26 9 0 0 0 3.6001E-11 1 7456 157.96 62.426 1 0.97996 0.83315 0 34795000 17192000 17603000 8745 785 3298 3383 13746 13746 ELNEDKLEK 9 2 0 Unmodified _ELNEDKLEK_ 0 0 1 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.3049 2 559.290411 1116.56627 80344.41 0.2802 0.00015671 -0.10236 -5.725E-05 0.17784 9.9465E-05 559.290397324388 567.304565470606 22.698 0.79934 22.698 22.484 23.283 0 144 32 11 0 0 0 4.863E-05 1 6896 128.27 59.887 1 0.99133 0.84212 0 27308000 13426000 13882000 8746 785 3298 3383 13747 13747 ELNEDVSADVEER 13 0 1 Unmodified _ELNEDVSADVEER_ 0 0 0 B7ZLC9;Q8TEQ6 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.8448 2 752.841724 1503.6689 69315.2 0.74899 0.00056387 0.60234 0.00045347 1.3513 0.0010173 752.840181054347 758.351236049176 53.366 0.63851 53.366 53.216 53.855 0 133 48 5 0 0 0 4.5814E-14 2 29840 135.99 111.21 1 1.59 1.6265 0 35646000 15168000 20478000 8747 1114 3299 3384 13748;13749 13749 ELNEDVSADVEER 13 0 1 Unmodified _ELNEDVSADVEER_ 0 0 0 B7ZLC9;Q8TEQ6 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.353 2 752.841724 1503.6689 69828.66 0.75904 0.00057144 1.4326 0.0010786 2.1917 0.00165 752.840340314914 758.351790386409 52.453 0.92071 52.453 51.977 52.898 0 218 70 6 0 0 0 3.4455E-06 2 29861 108.35 95.089 1 1.6335 1.7525 0 25348000 8292100 17056000 8748 1114 3299 3384 13750;13751 13751 ELNEDVSADVEER 13 0 1 Unmodified _ELNEDVSADVEER_ 0 0 0 B7ZLC9;Q8TEQ6 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.8425 2 752.841724 1503.6689 72022.34 0.50729 0.00038191 0.16825 0.00012667 0.67554 0.00050857 752.841577854118 757.845917377116 62.543 0.40739 62.543 62.331 62.738 0 97 31 5 0 0 0 0.037375 1 32099 31.989 31.989 1 0.86815 0.75372 0 2353000 1230000 1123000 8749 1114 3299 3384 13752 13752 ELNEDVSADVEER 13 0 1 Unmodified _ELNEDVSADVEER_ 0 0 0 B7ZLC9;Q8TEQ6 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 752.8422 2 752.841724 1503.6689 73445.73 0.29917 0.00022523 0.28443 0.00021413 0.5836 0.00043936 752.841838821006 757.845906106443 63.339 0.24239 63.339 63.181 63.423 3.8147E-06 46 20 4 0 0 0 0.0094371 1 31860 42.809 42.809 1 0.99489 0.87476 0 2493800 1476600 1017200 8750 1114 3299 3384 13753 13753 ELNITAAK 8 1 0 Unmodified _ELNITAAK_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.2552 2 430.247818 858.481082 91277.41 0.11454 4.9281E-05 -0.17745 -7.6346E-05 -0.062906 -2.7065E-05 430.247652159962 434.254832879887 38.449 1.1777 38.449 37.948 39.126 0 410 98 6 0 0 0 0.0092533 1 19515 75.109 35.006 1 1.0226 1.1813 0 223710000 111060000 112650000 8751 1631 3300 3385 13754 13754 ELNITAAK 8 1 0 Unmodified _ELNITAAK_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.2478 2 430.247818 858.481082 90902.85 -0.22488 -9.6752E-05 -0.20576 -8.8528E-05 -0.43064 -0.00018528 430.247771890071 434.254886404378 37.667 1.0594 37.667 37.09 38.15 0 453 83 9 0 0 0 0.013109 2 19374 66.073 23.206 1 0.99826 1.1691 0 310660000 158090000 152570000 8752 1631 3300 3385 13755;13756 13756 ELNITAAK 8 1 0 Unmodified _ELNITAAK_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 430.2473 2 430.247818 858.481082 91047.48 -0.20237 -8.7069E-05 -0.46965 -0.00020207 -0.67202 -0.00028913 430.247748377796 434.254758421248 43.286 1.579 43.286 42.896 44.475 0 477 104 10 0 0 0 0.029728 1 20282 52.403 20.467 1 0.95394 0.78855 0 43445000 21297000 22149000 8753 1631 3300 3385 13757 13757 ELNITAAK 8 1 0 Unmodified _ELNITAAK_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 430.2475 2 430.247818 858.481082 90099 -0.42801 -0.00018415 0.1598 6.8754E-05 -0.26821 -0.0001154 430.24784595732 434.25489512818 43.345 1.4869 43.345 42.938 44.425 -3.8147E-06 364 94 7 0 0 0 0.012693 2 19775 67.032 25.53 1 0.9349 0.77418 0 33905000 17076000 16829000 8754 1631 3300 3385 13758;13759 13758 ELNIVLPEFEK 11 1 0 Unmodified _ELNIVLPEFEK_ 0 0 0 Q71F23;A8K8D2;Q09GN1;A5D8X7 Q71F23 Q71F23 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.8667 2 665.866285 1329.71802 76547.6 0.66374 0.00044196 0.09848 6.5574E-05 0.76222 0.00050754 665.865867787778 669.873085173033 113.37 0.59546 113.37 113.06 113.66 -7.6294E-06 126 41 4 0 0 0 0.0003695 1 73604 83.869 69.75 1 0.68148 0.71108 0 10074000 5356000 4718400 8755 1866 3301 3386 13760 13760 ELNIVLPEFEK 11 1 0 Unmodified _ELNIVLPEFEK_ 0 0 0 Q71F23;A8K8D2;Q09GN1;A5D8X7 Q71F23 Q71F23 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.8741 2 665.866285 1329.71802 76177.6 0.73909 0.00049214 0.92072 0.00061308 1.6598 0.0011052 666.369064714355 669.87363083672 125.35 0.55519 125.35 125.09 125.64 7.6294E-06 85 20 6 0 0 0 0.00041575 2 75241 80.24 68.193 1 1.0241 0.80169 0 3862600 1856600 2006000 8756 1866 3301 3386 13761;13762 13762 ELNLEGTNLDK 11 1 0 Unmodified _ELNLEGTNLDK_ 0 0 0 Q9H5C8 Q9H5C8 Q9H5C8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.3277 2 623.319699 1244.62485 75500.13 0.94875 0.00059137 0.13949 8.6947E-05 1.0882 0.00067832 623.320156828238 627.326450546956 38.839 0.36294 38.839 38.591 38.953 0 92 29 4 0 0 0 0.00048114 1 19971 75.109 41.847 1 0.7583 0.74824 0 9271500 4295700 4975800 8757 2035 3302 3387 13763 13763 ELNLEGTNLDK 11 1 0 Unmodified _ELNLEGTNLDK_ 0 0 0 Q9H5C8 Q9H5C8 Q9H5C8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.8293 2 623.319699 1244.62485 74997.4 0.39052 0.00024342 0.63561 0.00039619 1.0261 0.00063961 623.319906440546 627.326986505305 37.948 0.304 37.948 37.765 38.069 0 72 22 4 0 0 0 0.022749 1 19736 42.599 23.328 1 0.62547 0.62881 0 27394000 16075000 11318000 8758 2035 3302 3387 13764 13764 ELNLTEHFGK 10 1 0 Unmodified _ELNLTEHFGK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.3069 2 594.306395 1186.59824 79521.22 0.82096 0.0004879 0.1176 6.9888E-05 0.93856 0.00055779 594.808163863947 598.313395431408 56.364 0.56526 56.364 56.088 56.653 0 212 49 6 0 0 0 4.8606E-08 2 31759 116.12 89.422 1 1.0715 1.1695 0 50492000 25927000 24565000 8759 1412 3303 3388 13765;13766 13766 ELNLTEHFGK 10 1 0 Unmodified _ELNLTEHFGK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.3138 2 594.306395 1186.59824 78546.68 0.53911 0.0003204 0.79486 0.00047239 1.334 0.00079279 594.306718807077 598.313465275745 55.157 0.83529 55.157 54.728 55.563 -3.8147E-06 303 64 7 0 0 0 2.8128E-09 2 31556 122.52 90.162 1 0.9292 1.0342 0 51190000 26662000 24528000 8760 1412 3303 3388 13767;13768 13767 ELNLTEHFGK 10 1 0 Unmodified _ELNLTEHFGK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 396.5405 3 396.540022 1186.59824 101542.8 0.089205 3.5373E-05 -0.092343 -3.6618E-05 -0.0031381 -1.2444E-06 396.539969917507 399.545680820009 55.203 0.40027 55.203 55.003 55.403 0 88 28 4 0 0 0 0.032426 1 31595 21.78 15.09 1 1.0982 1.1494 0 10484000 3272700 7211000 8761 1412 3303 3388 13769 13769 ELNLTEHFGK 10 1 0 Unmodified _ELNLTEHFGK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.3073 2 594.306395 1186.59824 79014.89 0.68895 0.00040945 0.17204 0.00010225 0.861 0.0005117 594.306510618799 598.313519115498 65.434 0.47495 65.434 65.171 65.646 0 164 34 6 0 0 0 0.0035438 2 33793 73.573 55.192 1 1.4727 1.16 0 5694800 2132800 3562100 8762 1412 3303 3388 13770;13771 13771 ELNLTEHFGK 10 1 0 Unmodified _ELNLTEHFGK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.3063 2 594.306395 1186.59824 79443.91 0.43038 0.00025578 0.33322 0.00019804 0.7636 0.00045381 594.306534669664 598.313607676263 65.776 0.48709 65.776 65.523 66.01 0 181 38 6 0 0 0 0.041181 2 33231 40.331 31.799 1 1.526 1.2504 0 4998700 1882900 3115800 8763 1412 3303 3388 13772;13773 13773 ELNLVLSVR 9 0 1 Unmodified _ELNLVLSVR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.8202 2 521.816399 1041.61824 86776.05 0.78083 0.00040745 -0.016302 -8.5068E-06 0.76452 0.00039894 521.816600116024 526.820279255006 96.81 0.59066 96.81 96.57 97.16 0 95 47 4 0 0 0 0.0056175 1 60474 66.27 44.184 1 1.0464 1.0458 0 11495000 4931800 6563400 8764 587 3304 3389 13774 13774 ELNNTCEPVVTQPK 14 1 0 Unmodified _ELNNTCEPVVTQPK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;A0A0A0MSM0;B4DY72;Q5TBM3 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.9079 2 814.901062 1627.78757 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.765 1 45.765 45.265 46.265 3.8147E-06 0 0 0 0.0034421 1 24660 57.019 43.592 1 8765 390 3305 3390 13775 13775 ELNNTCEPVVTQPK 14 1 0 Unmodified _ELNNTCEPVVTQPK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;A0A0A0MSM0;B4DY72;Q5TBM3 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.9147 2 814.901062 1627.78757 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.777 1 44.777 44.277 45.277 0 0 0 0 0.037686 1 24500 42.095 28.742 1 8766 390 3305 3390 13776 13776 ELNNYIMR 8 0 1 Oxidation (M) _ELNNYIM(ox)R_ ELNNYIM(1)R ELNNYIM(81.38)R 0 1 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.7609 2 534.760766 1067.50698 82650.3 0.51971 0.00027792 -0.16564 -8.8576E-05 0.35407 0.00018934 534.760962387602 539.764939704211 41.91 0.7844 41.91 41.61 42.395 3.8147E-06 314 60 9 0 0 0 0.0037788 2 22111 81.381 48.024 1 0.91211 1.0547 0 162300000 85859000 76439000 8767 2129 3306 3391 13777;13778 13778 1956 ELNNYIMR 8 0 1 Oxidation (M) _ELNNYIM(ox)R_ ELNNYIM(1)R ELNNYIM(107.43)R 0 1 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.7607 2 534.760766 1067.50698 82853.88 0.67904 0.00036312 -0.17973 -9.611E-05 0.49932 0.00026701 534.760801649396 539.764793277924 40.829 1.1375 40.829 40.364 41.502 0 363 91 6 0 0 0 0.00077927 2 21874 107.43 62.737 1 0.92241 1.0503 0 108960000 55005000 53955000 8768 2129 3306 3391 13779;13780 13780 1956 ELNNYIMR 8 0 1 Oxidation (M) _ELNNYIM(ox)R_ ELNNYIM(1)R ELNNYIM(86.09)R 0 1 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.765 2 534.760766 1067.50698 81358.66 0.28079 0.00015016 -0.15046 -8.0459E-05 0.13033 6.9697E-05 534.760457557952 539.764880988196 48.12 0.99898 48.12 47.593 48.592 -3.8147E-06 302 71 6 0 0 0 0.0032505 2 23336 86.086 53.616 1 0.73832 0.61027 0 11386000 6330400 5055900 8769 2129 3306 3391 13781;13782 13782 1956 ELNNYIMR 8 0 1 Oxidation (M) _ELNNYIM(ox)R_ ELNNYIM(1)R ELNNYIM(60.79)R 0 1 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.7654 2 534.760766 1067.50698 80911.7 0.21323 0.00011403 -0.25255 -0.00013505 -0.039321 -2.1027E-05 534.76041112568 539.764862532045 48.53 0.96499 48.53 48.033 48.998 0 364 80 6 0 0 0 0.0081953 1 22955 60.788 36.156 1 0.70879 0.57168 0 11247000 6296900 4949800 8770 2129 3306 3391 13783 13783 1956 ELNNYIMR 8 0 1 Unmodified _ELNNYIMR_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.7634 2 526.763309 1051.51206 NaN NaN NaN 0.28969 0.0001526 NaN NaN NaN NaN 68.518 0.63722 68.518 68.289 68.927 0 0 0 0 0.040797 1 35842 53.554 37.4 1 NaN NaN 0 1993100 1993100 0 8771 2129 3306 3392 13784 13784 ELNNYIMR 8 0 1 Unmodified _ELNNYIMR_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 526.7637 2 526.763309 1051.51206 NaN NaN NaN -0.024203 -1.2749E-05 NaN NaN NaN NaN 69.039 0.65706 69.039 68.759 69.416 -7.6294E-06 0 0 0 0.0070008 1 35344 83.801 64.324 1 NaN NaN 0 1450000 1450000 0 8772 2129 3306 3392 13785 13785 ELNQHLR 7 0 1 Unmodified _ELNQHLR_ 0 0 0 A0A024R804;A8WFP5;O60675;I3L2F8;A0A024R8X1;O15525 A0A024R804;A0A024R8X1 A0A024R804 MAFK;MAFG;hCG_1991559 Transcription factor MafK;Transcription factor MafG ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2486 2 455.248683 908.482814 NaN NaN NaN 0.18501 8.4226E-05 NaN NaN NaN NaN 17.856 0.50978 17.856 17.617 18.127 0 0 0 0 0.024263 1 4979 94.669 50.058 1 NaN NaN 0 64217000 64217000 0 8773 239;262 3307 3393 13786 13786 ELNQVMEQLGDAR 13 0 1 Oxidation (M) _ELNQVM(ox)EQLGDAR_ ELNQVM(1)EQLGDAR ELNQVM(84.2)EQLGDAR 0 1 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.8688 2 759.864479 1517.71441 NaN NaN NaN 0.55414 0.00042107 NaN NaN NaN NaN 54.501 0.093945 54.501 54.462 54.556 0 0 0 0 0.00014333 1 30667 84.198 61.859 1 NaN NaN 0 5871400 0 5871400 8774 1739 3308 3394 13787 13787 1569 ELNQVMEQLGDAR 13 0 1 Oxidation (M) _ELNQVM(ox)EQLGDAR_ ELNQVM(1)EQLGDAR ELNQVM(71.56)EQLGDAR 0 1 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.8659 2 759.864479 1517.71441 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.694 1 53.694 53.194 54.194 0 0 0 0 0.00073462 1 30687 71.555 52.312 1 8775 1739 3308 3394 13788 13788 1569 ELNQVMEQLGDAR 13 0 1 Oxidation (M) _ELNQVM(ox)EQLGDAR_ ELNQVM(1)EQLGDAR ELNQVM(113.69)EQLGDAR 0 1 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.8701 2 759.864479 1517.71441 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.805 1 53.805 53.305 54.305 0 0 0 0 6.7287E-11 1 30747 113.69 76.131 1 8776 1739 3308 3394 13789 13789 1569 ELNSTYSEQDPLLK 14 1 0 Unmodified _ELNSTYSEQDPLLK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.4091 2 818.906867 1635.79918 66275.71 0.77125 0.00063158 -1.0073 -0.00082485 -0.23601 -0.00019327 818.9059208006 822.912714562307 76.378 0.60374 76.378 76.109 76.713 7.6294E-06 244 49 7 0 0 0 1.9302E-07 4 44983 112.13 94.317 1 1.3057 1.4124 0 36210000 15129000 21081000 8777 1412 3309 3395 13790;13791;13792;13793 13793 ELNSTYSEQDPLLK 14 1 0 Unmodified _ELNSTYSEQDPLLK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.9112 2 818.906867 1635.79918 66612.23 0.669 0.00054784 -0.911 -0.00074603 -0.24201 -0.00019818 818.905764112192 822.912607412466 75.446 0.6011 75.446 75.19 75.791 0 269 54 7 0 0 0 3.133E-06 3 45388 103.43 87.894 1 1.2455 1.3513 0 39119000 15782000 23337000 8778 1412 3309 3395 13794;13795;13796 13796 ELNSTYSEQDPLLK 14 1 0 Unmodified _ELNSTYSEQDPLLK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.4071 2 818.906867 1635.79918 67161.33 0.61634 0.00050473 -0.24809 -0.00020316 0.36826 0.00030157 818.906535886459 822.913483711085 87.478 0.73975 87.478 87.168 87.907 7.6294E-06 220 44 8 0 0 0 0.00013085 2 48060 80.014 66.352 1 1.7811 1.409 0 10503000 3882600 6620900 8779 1412 3309 3395 13797;13798 13798 ELNSTYSEQDPLLK 14 1 0 Unmodified _ELNSTYSEQDPLLK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 819.4098 2 818.906867 1635.79918 67221.93 0.68843 0.00056376 -0.2527 -0.00020693 0.43574 0.00035683 818.906556379415 822.913672483452 87.572 0.65649 87.572 87.283 87.94 0 223 38 8 0 0 0 7.4942E-05 2 47302 89.283 64.992 1 1.8101 1.4828 0 8649400 3378900 5270500 8780 1412 3309 3395 13799;13800 13800 ELNTLCSELHVEPFQEEGETTILQLEK 27 1 0 Unmodified _ELNTLCSELHVEPFQEEGETTILQLEK_ 0 0 0 A0A024RC67;O43663;B4E238 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1062.8539 3 1062.85522 3185.54383 59936.5 0.82911 0.00088122 -0.38143 -0.0004054 0.44768 0.00047582 1063.52372092984 1065.86055842139 119.99 0.4866 119.99 119.75 120.24 0 155 33 9 0 0 0 1.1109E-07 2 77313 48.759 48.759 1 0.53365 0.52768 0 19327000 11913000 7413900 8781 353 3310 3396 13801;13802 13802 ELNTLCSELHVEPFQEEGETTILQLEK 27 1 0 Unmodified _ELNTLCSELHVEPFQEEGETTILQLEK_ 0 0 0 A0A024RC67;O43663;B4E238 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1063.5225 3 1062.85522 3185.54383 58874.88 0.58249 0.0006191 -0.17959 -0.00019088 0.4029 0.00042823 1063.18940451605 1065.86078627229 132.21 0.41354 132.21 132.08 132.49 0 164 19 13 0 0 0 6.4663E-08 2 80363 49.088 49.088 1 1.0911 0.87396 0 20878000 9274800 11603000 8782 353 3310 3396 13803;13804 13804 ELNTLCSELHVEPFQEEGETTILQLEK 27 1 0 Unmodified _ELNTLCSELHVEPFQEEGETTILQLEK_ 0 0 0 A0A024RC67;O43663;B4E238 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1065.8627 3 1062.85522 3185.54383 58415.13 0.61737 0.00065618 -0.039074 -4.1531E-05 0.5783 0.00061465 1063.1899186124 1065.86106471886 131.98 0.41028 131.98 131.79 132.2 0 150 18 11 0 0 0 6.6695E-20 2 79234 85.982 85.982 1 1.1839 0.94756 0 21138000 9287900 11850000 8783 353 3310 3396 13805;13806 13805 ELPAAEPVLSPLEGTK 16 1 0 Unmodified _ELPAAEPVLSPLEGTK_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;B4DMM2 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.9581 2 825.951078 1649.8876 68169.77 0.84168 0.00069519 0.60949 0.00050341 1.4512 0.0011986 825.951219986174 829.958575018608 103.37 0.52277 103.37 103.08 103.61 0 168 43 5 0 0 0 0.00015217 1 63638 65.179 52.603 1 0.97779 1.0019 0 13050000 5653700 7396500 8784 1063 3311 3397 13807 13807 ELPAAEPVLSPLEGTK 16 1 0 Unmodified _ELPAAEPVLSPLEGTK_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;B4DMM2 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.461 2 825.951078 1649.8876 67972.16 1.1115 0.00091803 0.32214 0.00026607 1.4336 0.0011841 825.951089704552 829.958085221413 102.72 0.49078 102.72 102.45 102.94 0 175 38 6 0 0 0 0.00015124 1 64849 63.091 54.137 1 1.0852 1.153 0 20560000 9097400 11463000 8785 1063 3311 3397 13808 13808 ELPAAEPVLSPLEGTK 16 1 0 Unmodified _ELPAAEPVLSPLEGTK_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;B4DMM2 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 829.9581 2 825.951078 1649.8876 68686.44 1.0472 0.00086491 -0.41641 -0.00034393 0.63076 0.00052098 825.950888772421 829.957747582704 115.21 0.53867 115.21 114.91 115.45 7.6294E-06 92 24 5 0 0 0 0.0068391 1 67374 35.204 29.1 1 1.0415 0.83151 0 6931100 3407200 3523900 8786 1063 3311 3397 13809 13809 ELPAAEPVLSPLEGTK 16 1 0 Unmodified _ELPAAEPVLSPLEGTK_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;B4DMM2 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.9584 2 825.951078 1649.8876 67922.56 0.83534 0.00068995 -0.085504 -7.0622E-05 0.74984 0.00061933 825.951184893807 829.957874916754 115.04 0.50433 115.04 114.81 115.31 -7.6294E-06 131 24 8 0 0 0 0.0014164 1 66343 45.28 39.309 1 1.1337 0.92229 0 7074800 3223800 3851000 8787 1063 3311 3397 13810 13810 ELPDPSQRPLGEPSAGLGEYLK 22 1 1 Unmodified _ELPDPSQRPLGEPSAGLGEYLK_ 0 0 1 Q9HC52;C9J6K3 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.0721 3 785.072657 2352.19614 69140.91 0.80467 0.00063172 -0.24743 -0.00019425 0.55724 0.00043748 785.407294090094 791.414147815918 98.019 0.72136 98.019 97.636 98.358 0 360 58 9 0 0 0 9.306E-06 3 59706 46.353 46.353 1 0.90494 1.0819 0 54214000 30526000 23688000 8788 2052 3312 3398 13811;13812;13813 13811 ELPDPSQRPLGEPSAGLGEYLK 22 1 1 Unmodified _ELPDPSQRPLGEPSAGLGEYLK_ 0 0 1 Q9HC52;C9J6K3 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.4073 3 785.072657 2352.19614 68935.66 0.97001 0.00076153 0.085276 6.6948E-05 1.0553 0.00082848 785.072737354347 791.414275843347 97.218 0.58667 97.218 96.908 97.495 0 290 46 8 0 0 0 1.3885E-07 2 60628 58.366 58.366 1 0.96463 1.1296 0 53801000 27790000 26011000 8789 2052 3312 3398 13814;13815 13814 ELPEFVVYQEIVETTK 16 1 0 Unmodified _ELPEFVVYQEIVETTK_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 962.5001 2 962.501132 1922.98771 63681.7 0.45198 0.00043504 -1.341 -0.0012907 -0.88897 -0.00085564 962.500457847048 966.508803559117 128.19 0.61864 128.19 127.83 128.45 0 153 40 8 0 0 0 0.00015602 1 83602 73.881 65.97 1 0.83219 0.81874 0 9062800 4648000 4414800 8790 1897 3313 3399 13816 13816 ELPEPILPADLHEALLK 17 1 0 Unmodified _ELPEPILPADLHEALLK_ 0 0 0 H3BR51;Q3KRB8;Q6P4F7 H3BR51 H3BR51 ARHGAP11A;ARHGAP11B Rho GTPase-activating protein 11B;Rho GTPase-activating protein 11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.0312 3 633.359298 1897.05606 78461.52 0.76651 0.00048548 0.30629 0.00019399 1.0728 0.00067947 634.028277764919 636.030599198087 116.13 0.40031 116.13 115.91 116.31 0 95 25 6 0 0 0 0.0066576 2 75871 24.287 24.287 1 1.4299 1.4516 0 9113300 3997300 5116100 8791 1304 3314 3400 13817;13818 13817 ELPEPILPADLHEALLK 17 1 0 Unmodified _ELPEPILPADLHEALLK_ 0 0 0 H3BR51;Q3KRB8;Q6P4F7 H3BR51 H3BR51 ARHGAP11A;ARHGAP11B Rho GTPase-activating protein 11B;Rho GTPase-activating protein 11A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.0324 3 633.359298 1897.05606 78329.58 0.97555 0.00061787 -0.07359 -4.6609E-05 0.90196 0.00057126 633.693437976551 636.364942772497 128.13 0.32655 128.13 127.93 128.26 0 47 12 6 0 0 0 0.0064145 1 77319 24.793 24.793 1 3.3345 2.697 0 2761000 451250 2309700 8792 1304 3314 3400 13819 13819 ELPEYYELIR 10 0 1 Unmodified _ELPEYYELIR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;A0A0U1RRF5;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RR09;B1ALG1;F6T8Q0;B1ALG2;Q8N9Q1;P51531;F6VDE0;B4DSC8;A0A0U1RRG6;A0A0U1RQU0;F6XE55;A0A0U1RQW7;A0A0U1RRN2;A0A0U1RR83;A0A0U1RQX3;A0A0U1RR26;B4DNT1;B1ALF6 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8461 2 662.84281 1323.67107 75993.24 0.58362 0.00038685 -0.041496 -2.7505E-05 0.54212 0.00035934 662.842778104514 667.846458663241 104.01 0.93621 104.01 103.46 104.4 7.6294E-06 308 74 6 0 0 0 0.001108 2 64021 76.064 76.064 1 0.62529 0.63475 0 27863000 16968000 10896000 8793 695;1595 3315 3401 13820;13821 13821 ELPEYYELIR 10 0 1 Unmodified _ELPEYYELIR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;A0A0U1RRF5;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RR09;B1ALG1;F6T8Q0;B1ALG2;Q8N9Q1;P51531;F6VDE0;B4DSC8;A0A0U1RRG6;A0A0U1RQU0;F6XE55;A0A0U1RQW7;A0A0U1RRN2;A0A0U1RR83;A0A0U1RQX3;A0A0U1RR26;B4DNT1;B1ALF6 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.843 2 662.84281 1323.67107 75967.36 0.69045 0.00045766 -0.15687 -0.00010398 0.53358 0.00035368 662.842702945643 667.846468056465 103.16 0.8692 103.16 102.82 103.69 0 295 69 6 0 0 0 0.00035656 2 65258 88.948 81.302 1 0.66318 0.72435 0 39253000 23526000 15727000 8794 695;1595 3315 3401 13822;13823 13823 ELPEYYELIR 10 0 1 Unmodified _ELPEYYELIR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;A0A0U1RRF5;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RR09;B1ALG1;F6T8Q0;B1ALG2;Q8N9Q1;P51531;F6VDE0;B4DSC8;A0A0U1RRG6;A0A0U1RQU0;F6XE55;A0A0U1RQW7;A0A0U1RRN2;A0A0U1RR83;A0A0U1RQX3;A0A0U1RR26;B4DNT1;B1ALF6 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.8434 2 662.84281 1323.67107 75405.72 1.098 0.00072779 -0.20123 -0.00013338 0.89675 0.00059441 662.842892726763 667.84648274853 115.64 0.68145 115.64 115.41 116.09 0 133 31 7 0 0 0 0.024135 1 67793 45.161 40.549 1 1.9372 1.6166 0 10501000 3727500 6773900 8795 695;1595 3315 3401 13824 13824 ELPEYYELIR 10 0 1 Unmodified _ELPEYYELIR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;A0A0U1RRF5;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RR09;B1ALG1;F6T8Q0;B1ALG2;Q8N9Q1;P51531;F6VDE0;B4DSC8;A0A0U1RRG6;A0A0U1RQU0;F6XE55;A0A0U1RQW7;A0A0U1RRN2;A0A0U1RR83;A0A0U1RQX3;A0A0U1RR26;B4DNT1;B1ALF6 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.8442 2 662.84281 1323.67107 75357.22 0.75853 0.00050279 -0.38533 -0.00025542 0.3732 0.00024737 662.84286423927 667.846405991961 115.59 0.68235 115.59 115.28 115.96 0 130 32 7 0 0 0 0.0085595 2 66781 55.908 55.908 1 1.6683 1.3736 0 8453100 3142900 5310300 8796 695;1595 3315 3401 13825;13826 13826 ELPLAADALTFAEVSK 16 1 0 Unmodified _ELPLAADALTFAEVSK_ 0 0 0 Q9Y446 Q9Y446 Q9Y446 PKP3 Plakophilin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.9514 2 837.951078 1673.8876 68368.99 0.70588 0.00059149 0.26385 0.00022109 0.96973 0.00081259 837.951398237636 841.958132061337 124.22 0.43372 124.22 124.01 124.44 0 104 29 6 0 0 0 0.00012894 2 80640 77.078 77.078 1 0.90633 0.9192 0 6601000 3152900 3448100 8797 2142 3316 3402 13827;13828 13828 ELPQVSFVK 9 1 0 Unmodified _ELPQVSFVK_ 0 0 0 A0A140VJK1;O76003 A0A140VJK1 A0A140VJK1 GLRX3 Glutaredoxin-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.8051 2 523.797675 1045.5808 NaN NaN NaN -0.54768 -0.00028687 NaN NaN NaN NaN 84.313 0.4538 84.313 84.007 84.46 0 0 0 0 0.0017257 1 50490 84.568 25.587 1 NaN NaN 0 18555000 0 18555000 8798 602 3317 3403 13829 13829 ELPRPVLEGQQSER 14 0 2 Unmodified _ELPRPVLEGQQSER_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.6254 3 546.625037 1636.85328 81547.22 0.63681 0.0003481 0.23006 0.00012575 0.86687 0.00047385 546.62520238136 553.297295713529 48.176 0.67151 48.176 47.85 48.521 3.8147E-06 331 56 8 0 0 0 8.1696E-07 2 26076 107.46 107.46 1 0.90708 0.98872 0 110160000 58991000 51167000 8799 2008;393 3318 3404 13830;13831 13830 ELPRPVLEGQQSER 14 0 2 Unmodified _ELPRPVLEGQQSER_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.2983 3 546.625037 1636.85328 80577.54 0.7336 0.000401 0.011159 6.0997E-06 0.74476 0.0004071 546.62492804656 553.297377663993 46.635 0.5696 46.635 46.419 46.989 -3.8147E-06 302 48 10 0 0 0 1.5232E-58 2 25810 200.19 183.96 1 0.91599 1.0759 0 131180000 61223000 69962000 8800 2008;393 3318 3404 13832;13833 13833 ELPRPVLEGQQSER 14 0 2 Unmodified _ELPRPVLEGQQSER_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.4424 2 819.433918 1636.85328 68285.59 0.98778 0.00080942 0.38975 0.00031938 1.3775 0.0011288 819.434139647704 829.943958715615 46.633 0.29282 46.633 46.561 46.853 0 76 25 5 0 0 0 0.001194 1 25798 82.171 63.426 1 1.1434 1.255 0 20404000 8638800 11765000 8801 2008;393 3318 3404 13834 13834 ELPRPVLEGQQSER 14 0 2 Unmodified _ELPRPVLEGQQSER_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.2972 3 546.625037 1636.85328 81945.94 0.51063 0.00027912 0.052992 2.8967E-05 0.56362 0.00030809 546.625093541705 553.297265899109 55.157 0.73966 55.157 54.822 55.562 -3.8147E-06 331 47 10 0 0 0 9.3538E-05 2 27502 68.972 68.972 1 1.4827 1.2392 0 15004000 5811200 9193000 8802 2008;393 3318 3404 13835;13836 13835 ELPRPVLEGQQSER 14 0 2 Unmodified _ELPRPVLEGQQSER_ 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.6252 3 546.625037 1636.85328 80971.34 0.44808 0.00024493 0.13284 7.2615E-05 0.58093 0.00031755 546.62526810718 553.297252649807 55.48 0.8437 55.48 55.148 55.992 0 237 49 8 0 0 0 0.0002205 1 27149 60.55 60.55 1 1.4908 1.3713 0 13900000 5817600 8082300 8803 2008;393 3318 3404 13837 13837 ELPSFLGK 8 1 0 Unmodified _ELPSFLGK_ 0 0 0 P26447 P26447 P26447 S100A4 Protein S100-A4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.7607 2 445.752736 889.490919 91786.27 0.24422 0.00010886 0.067005 2.9868E-05 0.31122 0.00013873 445.752689038668 449.759760556648 81.892 0.96359 81.892 81.37 82.334 -7.6294E-06 329 83 6 0 0 0 0.028279 1 49826 53.351 23.51 1 0.71021 0.80101 0 66759000 38784000 27975000 8804 1520 3319 3405 13838 13838 ELPTAFDYVEFTR 13 0 1 Unmodified _ELPTAFDYVEFTR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.3874 2 794.388113 1586.76167 68817.07 1.2089 0.0009603 -0.16746 -0.00013303 1.0414 0.00082727 794.387286423053 799.391951473526 115.74 0.68939 115.74 115.36 116.05 0 170 44 6 0 0 0 0.00021605 1 73671 69.721 63.749 1 1.6459 1.7025 0 20285000 7443600 12841000 8805 523 3320 3406 13839 13839 ELPTAFDYVEFTR 13 0 1 Unmodified _ELPTAFDYVEFTR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.8892 2 794.388113 1586.76167 69184.91 0.87514 0.0006952 0.11178 8.8798E-05 0.98692 0.000784 794.387737162498 799.39221701371 115.27 0.57522 115.27 114.92 115.5 7.6294E-06 137 38 6 0 0 0 0.00025005 2 75070 77.305 70.922 1 1.8928 1.9364 0 20886000 7331800 13554000 8806 523 3320 3406 13840;13841 13841 ELPTAFDYVEFTR 13 0 1 Unmodified _ELPTAFDYVEFTR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.8938 2 794.388113 1586.76167 69411.66 0.65584 0.00052099 0.38874 0.00030881 1.0446 0.00082981 794.387370892635 799.894042987067 126.93 0.39708 126.93 126.77 127.16 0 65 18 5 0 0 0 0.016826 1 75654 45.879 39.776 1 5.4044 4.6363 0 3342600 488460 2854100 8807 523 3320 3406 13842 13842 ELPTVVFR 8 0 1 Unmodified _ELPTVVFR_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.7838 2 480.779285 959.544017 87963.24 0.36088 0.0001735 0.20016 9.6234E-05 0.56104 0.00026974 480.779437349508 485.783372674374 86.978 0.31746 86.978 86.792 87.11 0 80 21 8 0 0 0 0.0041914 2 52457 94.407 51.407 1 0.78086 0.91171 0 198330000 110020000 88305000 8808 125 3321 3407 13843;13844 13844 ELPTVVFR 8 0 1 Unmodified _ELPTVVFR_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.7836 2 480.779285 959.544017 87632.73 0.50536 0.00024297 0.24057 0.00011566 0.74593 0.00035863 480.77954511981 485.783366113236 85.837 0.46786 85.837 85.563 86.031 0 110 33 9 0 0 0 0.0045535 2 52888 93.262 62.6 1 0.73739 0.85723 0 380830000 216880000 163940000 8809 125 3321 3407 13845;13846 13846 ELPTVVFR 8 0 1 Unmodified _ELPTVVFR_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.7834 2 480.779285 959.544017 88981.09 0.22279 0.00010711 -0.26039 -0.00012519 -0.037599 -1.8077E-05 480.779267992258 485.783307374009 99.491 0.42575 99.491 99.305 99.731 0 128 24 9 0 0 0 0.0090389 1 56219 76.035 42.677 1 1.1214 0.95578 0 36474000 17134000 19340000 8810 125 3321 3407 13847 13847 ELQAHGADELLK 12 1 0 Unmodified _ELQAHGADELLK_ 0 0 0 Q9BXV5;Q53R19;O15144;C9JTV5;G5E9J0 Q9BXV5 Q9BXV5 ARPC2 Actin-related protein 2/3 complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3578 2 662.348791 1322.68303 74835.84 0.08511 5.6372E-05 1.7779 0.0011776 1.863 0.001234 662.349467134013 666.356981536809 47.687 0.18335 47.687 47.566 47.749 -3.8147E-06 35 14 5 0 0 0 4.8092E-18 1 26558 145.46 85.438 1 1.8354 1.8632 0 29830000 9913100 19917000 8811 1375 3322 3408 13848 13848 ELQCLTPR 8 0 1 Unmodified _ELQCLTPR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.7645 2 508.763309 1015.51206 82703.79 0.80362 0.00040885 0.092467 4.7044E-05 0.89608 0.00045589 508.763888136456 513.767349627471 41.376 0.68966 41.376 41.128 41.818 -3.8147E-06 186 58 6 0 0 0 0.0012974 2 21769 110.31 59.344 1 0.97086 1.1385 0 217100000 123020000 94078000 8812 167 3323 3409 13849;13850 13850 ELQCLTPR 8 0 1 Unmodified _ELQCLTPR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.769 2 508.763309 1015.51206 81972.53 0.42136 0.00021437 -0.75061 -0.00038188 -0.32925 -0.00016751 508.762794965319 513.767490548197 40.266 0.64247 40.266 39.914 40.556 0 204 55 8 0 0 0 0.0019317 2 21407 104.44 53.471 1 0.73051 0.84845 0 353830000 198960000 154870000 8813 167 3323 3409 13851;13852 13851 ELQCLTPR 8 0 1 Unmodified _ELQCLTPR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.7674 2 508.763309 1015.51206 83884.67 0.22295 0.00011343 -0.33304 -0.00016944 -0.11009 -5.6009E-05 508.76307621489 513.76738054155 46.937 0.81641 46.937 46.659 47.476 0 289 62 8 0 0 0 0.0059196 3 22649 88.942 38.903 1 0.92984 0.78389 0 28484000 14411000 14073000 8814 167 3323 3409 13853;13854;13855 13854 ELQCLTPR 8 0 1 Unmodified _ELQCLTPR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.7676 2 508.763309 1015.51206 83207.66 0.042994 2.1874E-05 -0.29304 -0.00014909 -0.25005 -0.00012722 508.762901473132 513.767522631573 46.944 0.9544 46.944 46.707 47.661 0 296 73 9 0 0 0 0.0069463 2 22112 85.064 35.025 1 0.96573 0.84242 0 28158000 13563000 14595000 8815 167 3323 3409 13856;13857 13857 ELQDAFSR 8 0 1 Unmodified _ELQDAFSR_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.2376 2 483.237981 964.461409 87194.7 0.24552 0.00011864 0.27622 0.00013348 0.52173 0.00025212 483.238160271803 488.242136955718 42.497 0.64294 42.497 42.223 42.866 3.8147E-06 281 51 8 0 0 0 0.0017476 2 22557 106.14 70.647 1 0.93938 1.1117 0 342620000 159100000 183520000 8816 1316 3324 3410 13858;13859 13859 ELQDAFSR 8 0 1 Unmodified _ELQDAFSR_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.2391 2 483.237981 964.461409 87115.63 0.52478 0.00025359 0.027926 1.3495E-05 0.55271 0.00026709 483.237883664308 488.242094579436 41.396 1.1213 41.396 40.979 42.101 0 447 98 6 0 0 0 0.0019563 3 22181 104.21 64.546 1 0.98972 1.1302 0 148210000 75646000 72561000 8817 1316 3324 3410 13860;13861;13862 13861 ELQDAFSR 8 0 1 Unmodified _ELQDAFSR_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.2422 2 483.237981 964.461409 87094.35 -0.030409 -1.4695E-05 -0.085586 -4.1358E-05 -0.11599 -5.6053E-05 483.23783790544 488.242067358661 48.013 0.85673 48.013 47.807 48.663 0 233 62 8 0 0 0 0.0056635 1 23334 89.752 44.034 1 1.0418 0.87042 0 23778000 11482000 12296000 8818 1316 3324 3410 13863 13863 ELQDAFSR 8 0 1 Unmodified _ELQDAFSR_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.2418 2 483.237981 964.461409 86567.94 0.00089787 4.3388E-07 -0.66731 -0.00032247 -0.66641 -0.00032203 483.237334595653 488.241994742673 48.205 1.1303 48.205 47.867 48.998 -3.8147E-06 370 95 5 0 0 0 0.0023621 1 22829 100.45 56.004 1 1.0521 0.8617 0 8960200 4812600 4147500 8819 1316 3324 3410 13864 13864 ELQEVIQQQNEK 12 1 0 Unmodified _ELQEVIQQQNEK_ 0 0 0 A8K8N3;Q96R06;K7ELG0 A8K8N3 A8K8N3 SPAG5 Sperm-associated antigen 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.3891 2 743.38082 1484.74709 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.354 1 42.354 41.854 42.854 0 0 0 0 2.9187E-16 1 22500 125.74 70.169 1 8820 779 3325 3411 13865 13865 ELQGDGPPSSPTNDPTVK 18 1 0 Unmodified _ELQGDGPPSSPTNDPTVK_ 0 0 0 Q12873 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 923.9518 2 919.94197 1837.86939 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.972 1 42.972 42.472 43.472 3.8147E-06 0 0 0 0.00041013 1 23257 58.32 42.948 1 8821 1701 3326 3412 13866 13866 ELQGFLDGVK 10 1 0 Unmodified _ELQGFLDGVK_ 0 0 0 A0A0X1KG71;Q8WX92 A0A0X1KG71 A0A0X1KG71 NELFB Negative elongation factor B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.3062 2 553.298039 1104.58152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.198 1 86.198 85.698 86.698 0 0 0 0 5.5794E-05 1 51872 85.862 45.594 1 8822 594 3327 3413 13867 13867 ELQIPALSTR 10 0 1 Unmodified _ELQIPALSTR_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.3138 2 564.324588 1126.63462 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.518 1 88.518 88.018 89.018 0 0 0 0 2.7715E-05 1 54593 92.051 35.793 1 8823 1795 3328 3414 13868 13868 ELQISLK 7 1 0 Unmodified _ELQISLK_ 0 0 0 Q03164;H7BYJ6 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.7525 2 415.752736 829.490919 94964.59 -0.12986 -5.3988E-05 -2.3879 -0.00099276 -2.5177 -0.0010467 415.75291945821 419.75977185337 67.065 0.59016 67.065 66.793 67.383 0 122 45 4 0 0 0 0.026488 1 38718 88.029 6.6476 1 0.76071 0.74995 0 19466000 11874000 7592800 8824 1680 3329 3415 13869 13869 ELQISLK 7 1 0 Unmodified _ELQISLK_ 0 0 0 Q03164;H7BYJ6 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 419.76 2 415.752736 829.490919 NaN NaN NaN 0.055432 2.3046E-05 NaN NaN NaN NaN 65.883 0.47031 65.883 65.583 66.054 0 0 0 0 0.036877 1 38814 64.803 7.3398 1 NaN NaN 0 7918300 0 7918300 8825 1680 3329 3415 13870 13870 ELQISLK 7 1 0 Unmodified _ELQISLK_ 0 0 0 Q03164;H7BYJ6 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.7531 2 415.752736 829.490919 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.845 1 65.845 65.345 66.345 0 0 0 0 0.024379 1 38876 76.847 7.4143 1 8826 1680 3329 3415 13871 13871 ELQISLK 7 1 0 Unmodified _ELQISLK_ 0 0 0 Q03164;H7BYJ6 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.7526 2 415.752736 829.490919 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.869 1 65.869 65.369 66.369 0 0 0 0 0.024379 1 38892 76.847 7.4143 1 8827 1680 3329 3415 13872 13872 ELQLLNDK 8 1 0 Unmodified _ELQLLNDK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.7788 2 486.771657 971.528761 89200.27 0.060556 2.9477E-05 -0.16103 -7.8386E-05 -0.10048 -4.8909E-05 486.771444381956 490.778715412462 61.579 0.54653 61.579 61.235 61.781 0 108 43 4 0 0 0 0.013109 1 35191 66.073 18.224 1 1.3302 1.3159 0 8342900 4008100 4334800 8828 1581 3330 3416 13873 13873 ELQLLNDK 8 1 0 Unmodified _ELQLLNDK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.7789 2 486.771657 971.528761 89733.22 -0.044774 -2.1795E-05 0.014 6.8146E-06 -0.030775 -1.498E-05 486.771405300212 490.778796223012 60.334 0.47536 60.334 60.05 60.526 -3.8147E-06 73 26 4 0 0 0 0.0092533 1 35194 75.109 26.763 1 1.3159 1.3433 0 12012000 6645800 5365800 8829 1581 3330 3416 13874 13874 ELQLLSETLSLEK 13 1 0 Unmodified _ELQLLSETLSLEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.9204 2 751.919246 1501.82394 70766.54 0.82724 0.00062202 -0.049756 -3.7412E-05 0.77748 0.0005846 751.919401091431 755.926216457183 116.31 0.55934 116.31 116.14 116.7 0 151 37 7 0 0 0 1.3684E-05 2 74177 99.752 99.752 1 1.1723 1.2085 0 10876000 5335900 5539800 8830 1581 3331 3417 13875;13876 13875 ELQLLSETLSLEK 13 1 0 Unmodified _ELQLLSETLSLEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.9198 2 751.919246 1501.82394 71312.47 0.9789 0.00073605 0.21001 0.00015791 1.1889 0.00089396 752.42069166411 755.926420856905 115.77 0.49742 115.77 115.52 116.01 -7.6294E-06 121 32 5 0 0 0 5.9069E-09 2 75599 119.27 119.27 1 1.1949 1.2258 0 17709000 8413400 9295300 8831 1581 3331 3417 13877;13878 13877 ELQLLSETLSLEK 13 1 0 Unmodified _ELQLLSETLSLEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 755.9275 2 751.919246 1501.82394 NaN NaN NaN -0.0046566 -3.5014E-06 NaN NaN NaN NaN 127.91 0.44868 127.91 127.71 128.16 -7.6294E-06 0 0 0 7.4283E-05 1 76286 91.914 67.571 1 NaN NaN 0 2358100 0 2358100 8832 1581 3331 3417 13879 13879 ELQSAVPR 8 0 1 Unmodified _ELQSAVPR_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2546 2 450.250892 898.48723 89407.85 -0.40417 -0.00018198 0.54768 0.00024659 0.14351 6.4618E-05 450.251203352535 455.254838137271 29.257 0.35313 29.257 29.069 29.422 0 66 23 5 0 0 0 0.006912 1 14105 85.212 26.607 1 1.1241 1.1779 0 39224000 19188000 20035000 8833 1724 3332 3418 13880 13880 ELQSQISDTSVVLSMDNSR 19 0 1 Oxidation (M) _ELQSQISDTSVVLSM(ox)DNSR_ ELQSQISDTSVVLSM(1)DNSR ELQSQISDTSVVLSM(143.46)DNSR 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1068.5138 2 1063.00751 2124.00048 58773.34 0.74866 0.00079584 -0.4527 -0.00048123 0.29596 0.00031461 1063.50840668103 1068.01136405972 82.425 0.92818 82.425 81.955 82.883 0 571 78 10 0 0 0 1.5479E-30 3 49038 143.46 143.46 1 1.428 1.6732 0 213450000 87418000 126030000 + 8834 1156 3333 3419 13881;13882;13883 13882 863 ELQSQISDTSVVLSMDNSR 19 0 1 Oxidation (M) _ELQSQISDTSVVLSM(ox)DNSR_ ELQSQISDTSVVLSM(1)DNSR ELQSQISDTSVVLSM(103.85)DNSR 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1068.5134 2 1063.00751 2124.00048 58342.79 0.74563 0.00079261 -0.36851 -0.00039173 0.37712 0.00040088 1063.50858195979 1068.01149274077 81.616 0.87419 81.616 81.193 82.068 0 539 75 10 0 0 0 2.9672E-12 4 49634 103.85 98.774 1 1.4641 1.6664 0 127710000 53767000 73946000 + 8835 1156 3333 3419 13884;13885;13886;13887 13886 863 ELQSQISDTSVVLSMDNSR 19 0 1 Oxidation (M) _ELQSQISDTSVVLSM(ox)DNSR_ ELQSQISDTSVVLSM(1)DNSR ELQSQISDTSVVLSM(59.25)DNSR 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1068.0118 2 1063.00751 2124.00048 58075.94 0.24687 0.00026243 -0.82961 -0.00088188 -0.58274 -0.00061946 1063.50725505744 1068.01168479892 94.394 0.64481 94.394 94.021 94.666 7.6294E-06 255 38 9 0 0 0 1.192E-05 1 52718 59.248 59.248 1 1.1458 0.98477 0 7867400 3773300 4094100 + 8836 1156 3333 3419 13888 13888 863 ELQSQISDTSVVLSMDNSR 19 0 1 Unmodified _ELQSQISDTSVVLSMDNSR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.0087 2 1055.01006 2108.00556 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.993 1 97.993 97.493 98.493 0 0 0 0 0.00050397 1 59851 73.022 64.718 1 + 8837 1156 3333 3420 13889 13889 ELQSQISDTSVVLSMDNSR 19 0 1 Unmodified _ELQSQISDTSVVLSMDNSR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1055.5122 2 1055.01006 2108.00556 58636.21 0.7501 0.00079136 2.1 0.0022156 2.8501 0.0030069 1056.01797005866 1060.51612716095 97.472 0.20122 97.472 97.387 97.588 0 41 15 6 0 0 0 0.0030425 3 60915 47.774 47.774 1 0.83427 0.8357 0 18578000 10657000 7920400 + 8838 1156 3333 3420 13890;13891;13892 13891 ELQSQISDTSVVLSMDNSR 19 0 1 Unmodified _ELQSQISDTSVVLSMDNSR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1060.0133 2 1055.01006 2108.00556 59192.35 0.43365 0.00045751 -0.51886 -0.0005474 -0.085208 -8.9895E-05 1055.51123256231 1060.01398936644 110.91 0.44579 110.91 110.66 111.1 0 104 18 8 0 0 0 0.0077775 1 64089 40.237 34.958 1 1.913 1.6221 0 5094800 2012100 3082700 + 8839 1156 3333 3420 13893 13893 ELQSQISDTSVVLSMDNSR 19 0 1 Unmodified _ELQSQISDTSVVLSMDNSR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1055.5121 2 1055.01006 2108.00556 59279.07 0.287 0.00030279 0.074483 7.858E-05 0.36149 0.00038137 1055.00956894845 1060.51611088807 110.91 0.42297 110.91 110.62 111.04 0 97 21 6 0 0 0 0.0062747 1 63168 30.483 25.204 1 1.6191 1.3347 0 8338100 3218300 5119800 + 8840 1156 3333 3420 13894 13894 ELQSVEQEVR 10 0 1 Unmodified _ELQSVEQEVR_ 0 0 0 D3DVL7;B4DU42;Q969Z0;C9IZN7;B3KM73;C9J7P5 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.8159 2 608.812042 1215.60953 78487.98 0.31721 0.00019312 1.0118 0.00061599 1.329 0.00080911 608.812705948057 613.816068060419 43.302 0.4565 43.302 42.997 43.454 3.8147E-06 109 36 5 0 0 0 0.00011197 2 23194 96.948 57.985 1 1.1767 1.2315 0 12785000 5024600 7760100 8841 1036 3334 3421 13895;13896 13896 ELQSVEQEVR 10 0 1 Unmodified _ELQSVEQEVR_ 0 0 0 D3DVL7;B4DU42;Q969Z0;C9IZN7;B3KM73;C9J7P5 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.816 2 608.812042 1215.60953 76942.51 0.72347 0.00044045 -0.75076 -0.00045707 -0.027294 -1.6617E-05 608.81114421727 613.815852673525 42.662 0.64844 42.662 42.345 42.993 0 185 52 6 0 0 0 6.0391E-08 2 22972 113.74 67.611 1 0.56505 0.62108 0 40643000 26754000 13890000 8842 1036 3334 3421 13897;13898 13897 ELQTTLVR 8 0 1 Unmodified _ELQTTLVR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.2802 2 480.279649 958.544745 88196.67 0.29404 0.00014122 0.050324 2.417E-05 0.34436 0.00016539 480.279429053688 485.283757568011 48.573 0.6737 48.573 48.22 48.894 3.8147E-06 216 51 6 0 0 0 0.011407 3 26449 69.998 19.183 1 1.2567 1.281 0 30408000 13144000 17265000 8843 1412 3335 3422 13899;13900;13901 13901 ELQTTLVR 8 0 1 Unmodified _ELQTTLVR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.28 2 480.279649 958.544745 86852.21 0.4004 0.0001923 0.59237 0.0002845 0.99277 0.00047681 480.280353896545 485.283765411608 47.469 0.57117 47.469 47.147 47.718 0 155 40 5 0 0 0 0.012845 1 26400 66.682 20.964 1 1.2089 1.4028 0 64767000 26191000 38575000 8844 1412 3335 3422 13902 13902 ELQTTLVR 8 0 1 Unmodified _ELQTTLVR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.2838 2 480.279649 958.544745 87742.11 0.23194 0.0001114 -0.25403 -0.00012201 -0.022091 -1.061E-05 480.279160119772 485.283674516007 55.392 0.68686 55.392 55.053 55.74 0 169 45 6 0 0 0 0.0083247 1 27688 79.116 20.135 1 1.586 1.3249 0 3321400 1361900 1959500 8845 1412 3335 3422 13903 13903 ELRDEEQTAESIK 13 1 1 Unmodified _ELRDEEQTAESIK_ 0 0 1 Q14566;Q4ZG57 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.3934 2 774.381017 1546.74748 71716.56 0.58769 0.0004551 0.36744 0.00028454 0.95514 0.00073964 774.882558505947 783.392476662888 31.713 0.34838 31.713 31.502 31.851 0 67 32 4 0 0 0 1.702E-05 1 15652 117.79 85.95 1 1.7929 1.9252 0 13777000 5257100 8519600 8846 1734 3336 3423 13904 13904 ELRDEEQTAESIK 13 1 1 Unmodified _ELRDEEQTAESIK_ 0 0 1 Q14566;Q4ZG57 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.3817 2 774.381017 1546.74748 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.788 1 30.788 30.288 31.288 0 0 0 0 9.7563E-16 1 15144 124.21 82.807 1 8847 1734 3336 3423 13905 13905 ELSAALQDKK 10 2 0 Unmodified _ELSAALQDKK_ 0 0 1 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.8088 2 551.808771 1101.60299 76353.46 0.34513 0.00019045 1.1041 0.00060927 1.4493 0.00079972 551.808815133306 559.822939335339 26.492 0.40891 26.492 26.263 26.672 0 78 17 6 0 0 0 0.040423 2 10032 45.161 35.947 1 1.5871 1.3718 0 4291100 1605400 2685700 8848 186;1747;718 3337 3424 13906;13907 13907 ELSAALQDKK 10 2 0 Unmodified _ELSAALQDKK_ 0 0 1 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.8228 2 551.808771 1101.60299 80548.72 0.38747 0.00021381 1.0436 0.00057589 1.4311 0.0007897 551.808770105637 559.822806106738 26.469 0.46622 26.469 26.17 26.636 -1.9073E-06 92 20 6 0 0 0 0.048246 2 9469 43.282 33.888 1 1.5411 1.3249 0 3595900 1235800 2360100 8849 186;1747;718 3337 3424 13908;13909 13909 ELSAVTFPDIIR 12 0 1 Unmodified _ELSAVTFPDIIR_ 0 0 0 J3KPM9;P42224 J3KPM9 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.8812 2 680.877185 1359.73982 NaN NaN NaN 0.4611 0.00031396 NaN NaN NaN NaN 115.85 0.47029 115.85 115.65 116.12 7.6294E-06 0 0 0 4.1893E-05 1 73740 96.342 69.088 1 NaN NaN 0 9264200 0 9264200 8850 1326 3338 3425 13910 13910 ELSAVTFPDIIR 12 0 1 Unmodified _ELSAVTFPDIIR_ 0 0 0 J3KPM9;P42224 J3KPM9 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.878 2 680.877185 1359.73982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.9 1 115.9 115.4 116.4 0 0 0 0 0.0037322 1 73883 66.19 46.919 1 8851 1326 3338 3425 13911 13911 ELSAVTFPDIIR 12 0 1 Unmodified _ELSAVTFPDIIR_ 0 0 0 J3KPM9;P42224 J3KPM9 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.882 2 680.877185 1359.73982 NaN NaN NaN 0.47646 0.00032441 NaN NaN NaN NaN 115.31 0.45491 115.31 115.09 115.55 0 0 0 0 0.00046331 1 75143 88.681 61.427 1 NaN NaN 0 9502200 0 9502200 8852 1326 3338 3425 13912 13912 ELSAVTFPDIIR 12 0 1 Unmodified _ELSAVTFPDIIR_ 0 0 0 J3KPM9;P42224 J3KPM9 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.882 2 680.877185 1359.73982 NaN NaN NaN 0.16232 0.00011052 NaN NaN NaN NaN 127.26 0.3759 127.26 127.03 127.4 0 0 0 0 0.0075173 1 75719 58.37 38.583 1 NaN NaN 0 852300 0 852300 8853 1326 3338 3425 13913 13913 ELSDEIQVQVFEK 13 1 0 Unmodified _ELSDEIQVQVFEK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.3993 2 782.398678 1562.7828 67412.8 0.73299 0.00057349 -1.3071 -0.0010226 -0.57408 -0.00044916 782.398403386993 786.405113301959 99.265 0.6169 99.265 98.965 99.582 0 163 52 6 0 0 0 0.0059885 1 62209 60.255 44.989 1 0.74554 0.83971 0 58591000 29799000 28792000 8854 1937 3339 3426 13914 13914 ELSDSVTLSSSDR 13 0 1 Unmodified _ELSDSVTLSSSDR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3386 2 698.333535 1394.65252 NaN NaN NaN -0.6688 -0.00046704 NaN NaN NaN NaN 52.401 0.72334 52.401 51.924 52.647 0 0 0 0 1.5337E-05 1 28930 94.465 64.211 1 NaN NaN 0 18306000 0 18306000 8855 39 3340 3427 13915 13915 ELSDSVTLSSSDR 13 0 1 Unmodified _ELSDSVTLSSSDR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.3388 2 698.333535 1394.65252 71070.43 0.59559 0.00041592 -0.023333 -1.6294E-05 0.57226 0.00039963 698.333438787345 703.337499532912 51.165 0.41027 51.165 50.943 51.353 0 151 33 6 0 0 0 2.8294E-09 1 28930 122.42 122.42 1 1.0564 1.1538 0 38144000 18598000 19546000 8856 39 3340 3427 13916 13916 ELSDSVTLSSSDR 13 0 1 Unmodified _ELSDSVTLSSSDR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.3375 2 698.333535 1394.65252 81929.76 0.42055 0.00029368 0.42975 0.00030011 0.85029 0.00059379 698.333840435264 703.337746770141 60.979 0.62694 60.979 60.712 61.339 -3.8147E-06 118 56 4 0 0 0 0.013135 1 30538 38.634 38.634 1 1.4505 1.2507 0 1664900 643190 1021700 8857 39 3340 3427 13917 13917 ELSENTPHLSDEALMGLSVR 20 0 1 Oxidation (M) _ELSENTPHLSDEALM(ox)GLSVR_ ELSENTPHLSDEALM(1)GLSVR ELSENTPHLSDEALM(43.16)GLSVR 0 1 0 Q9ULX9;B0QY70 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.0283 3 738.69508 2213.06341 68959.84 0.97801 0.00072245 0.070279 5.1915E-05 1.0483 0.00077437 739.028893114954 742.365459790282 92.282 0.53468 92.282 92.024 92.559 0 234 52 6 0 0 0 2.8378E-05 1 55861 43.164 43.164 1 1.4905 1.5249 0 31786000 13493000 18293000 8858 2112 3341 3428 13918 13918 1938 ELSENTPHLSDEALMGLSVR 20 0 1 Oxidation (M) _ELSENTPHLSDEALM(ox)GLSVR_ ELSENTPHLSDEALM(1)GLSVR ELSENTPHLSDEALM(56.72)GLSVR 0 1 0 Q9ULX9;B0QY70 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.0321 3 738.69508 2213.06341 68669 0.58251 0.0004303 1.0958 0.00080946 1.6783 0.0012398 739.029105063928 742.031612669081 91.449 0.53951 91.449 91.201 91.74 0 265 47 8 0 0 0 1.3245E-06 2 56485 56.719 56.719 1 1.4019 1.5413 0 40704000 15480000 25224000 8859 2112 3341 3428 13919;13920 13919 1938 ELSEQLGQAER 11 0 1 Unmodified _ELSEQLGQAER_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3194 2 630.314948 1258.61534 NaN NaN NaN -0.80283 -0.00050604 NaN NaN NaN NaN 39.161 0.54159 39.161 38.93 39.472 0 0 0 0 3.1071E-05 1 20291 101.66 55.274 1 NaN NaN 0 20766000 0 20766000 8860 397;1622 3342 3429 13921 13921 ELSEQLGQAER 11 0 1 Unmodified _ELSEQLGQAER_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.782 2 630.314948 1258.61534 77361.3 0.42742 0.00026941 -0.39306 -0.00024775 0.03436 2.1658E-05 630.315035474527 635.318636898382 38.189 0.56043 38.189 38.032 38.592 0 150 45 6 0 0 0 0.02313 1 20059 77.379 57.617 1 1.5002 1.6667 0 43111000 18259000 24853000 8861 397;1622 3342 3429 13922 13922 ELSEQLGQAER 11 0 1 Unmodified _ELSEQLGQAER_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.3192 2 630.314948 1258.61534 77193.84 0.48811 0.00030766 0.095235 6.0028E-05 0.58334 0.00036769 630.315576630662 635.318998073686 44.994 0.54155 44.994 44.716 45.257 0 147 40 5 0 0 0 0.0033031 1 21414 60.064 32.051 1 1.4525 1.2606 0 2158000 754980 1403000 8862 397;1622 3342 3429 13923 13923 ELSEQLGQAER 11 0 1 Unmodified _ELSEQLGQAER_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.3204 2 630.314948 1258.61534 NaN NaN NaN -0.58056 -0.00036593 NaN NaN NaN NaN 45.199 0.4474 45.199 44.992 45.44 0 0 0 0 0.052086 1 21127 43.651 15.252 1 NaN NaN 0 1224000 0 1224000 8863 397;1622 3342 3429 13924 13924 ELSESVQQQSTPVPLISPK 19 1 0 Unmodified _ELSESVQQQSTPVPLISPK_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q5JV90;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1038.058 2 1034.05205 2066.08955 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.634 1 93.634 93.134 94.134 0 0 0 0 0.012711 1 58129 43.382 35.078 1 8864 422;1317 3343 3430 13925 13925 ELSFVLDYINQSPK 14 1 0 Unmodified _ELSFVLDYINQSPK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.938 2 826.930145 1651.84574 66352.1 1.4187 0.0011732 -0.30308 -0.00025063 1.1156 0.00092255 826.929710098829 830.936819682514 118.44 0.74492 118.44 118.1 118.85 7.6294E-06 228 43 9 0 0 0 6.5662E-23 2 75901 150.46 150.46 1 0.94467 1.0371 0 53591000 27229000 26362000 8865 716 3344 3431 13926;13927 13926 ELSFVLDYINQSPK 14 1 0 Unmodified _ELSFVLDYINQSPK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.931 2 826.930145 1651.84574 66556.59 0.99117 0.00081963 0.082669 6.8362E-05 1.0738 0.00088799 826.930184753537 830.937304351868 117.99 0.66441 117.99 117.68 118.34 0 264 44 9 0 0 0 3.9049E-21 2 77396 143.79 143.79 1 0.94684 1.0661 0 69922000 38138000 31784000 8866 716 3344 3431 13928;13929 13929 ELSFVLDYINQSPK 14 1 0 Unmodified _ELSFVLDYINQSPK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 826.9304 2 826.930145 1651.84574 67279.81 0.80368 0.00066459 0.4518 0.0003736 1.2555 0.0010382 827.431932874267 830.937557814787 130.38 0.94043 130.38 130.06 131 -1.5259E-05 262 44 10 0 0 0 0.00013085 3 78889 80.014 80.014 1 1.2424 0.99891 0 21732000 9909000 11823000 8867 716 3344 3431 13930;13931;13932 13931 ELSFVLDYINQSPK 14 1 0 Unmodified _ELSFVLDYINQSPK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.4395 2 826.930145 1651.84574 67219.13 1.1347 0.00093834 0.36229 0.00029959 1.497 0.0012379 826.930371259213 830.937492104279 130.13 1.0094 130.13 129.83 130.84 0 242 40 10 0 0 0 3.001E-14 2 77850 128.28 128.28 1 1.2606 1.014 0 22619000 10033000 12586000 8868 716 3344 3431 13933;13934 13933 ELSGLGSALK 10 1 0 Unmodified _ELSGLGSALK_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;G3V1M7 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.7866 2 487.779482 973.544411 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.66 1 64.66 64.16 65.16 0 0 0 0 0.003374 1 37169 66.27 26.002 1 8869 965 3345 3432 13935 13935 ELSGLGSALK 10 1 0 Unmodified _ELSGLGSALK_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;G3V1M7 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.7791 2 487.779482 973.544411 87895.42 0.20494 9.9965E-05 -1.51 -0.00073655 -1.3051 -0.00063658 487.779475287208 491.786513987449 74.499 0.53304 74.499 74.213 74.746 0 116 32 5 0 0 0 0.055642 1 38692 35.511 12.083 1 0.57963 0.45333 0 2089700 1386400 703360 8870 965 3345 3432 13936 13936 ELSLAGNELGDEGAR 15 0 1 Unmodified _ELSLAGNELGDEGAR_ 0 0 0 A0A024RC87;A0A140VJT8;P13489;H0YCR7 A0A024RC87 A0A024RC87 RNH1 Ribonuclease inhibitor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.8785 2 765.873359 1529.73216 NaN NaN NaN -0.38128 -0.00029201 NaN NaN NaN NaN 74.281 0.46736 74.281 74.073 74.54 0 0 0 0 4.4355E-07 1 43518 100.38 83.145 1 NaN NaN 0 7008300 0 7008300 8871 355 3346 3433 13937 13937 ELSLAGNELGDEGAR 15 0 1 Unmodified _ELSLAGNELGDEGAR_ 0 0 0 A0A024RC87;A0A140VJT8;P13489;H0YCR7 A0A024RC87 A0A024RC87 RNH1 Ribonuclease inhibitor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.8777 2 765.873359 1529.73216 NaN NaN NaN -0.34226 -0.00026213 NaN NaN NaN NaN 73.289 0.53551 73.289 72.992 73.527 -7.6294E-06 0 0 0 1.3221E-15 1 43944 119.74 96.69 1 NaN NaN 0 6911300 0 6911300 8872 355 3346 3433 13938 13938 ELSPLFLR 8 0 1 Unmodified _ELSPLFLR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.7922 2 487.78711 973.559667 85923 0.26551 0.00012951 0.64097 0.00031266 0.90648 0.00044217 487.787527496698 492.791449356741 98.978 0.79892 98.978 98.602 99.401 0 252 64 6 0 0 0 0.0077064 2 60558 81.784 57.812 1 1.2079 1.2245 0 28590000 11995000 16595000 8873 1412 3347 3434 13939;13940 13939 ELSPLFLR 8 0 1 Unmodified _ELSPLFLR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.7914 2 487.78711 973.559667 NaN NaN NaN 0.52516 0.00025617 NaN NaN NaN NaN 98.024 0.86791 98.024 97.624 98.492 0 0 0 0 0.017319 1 61291 67.032 43.06 1 NaN NaN 0 29246000 0 29246000 8874 1412 3347 3434 13941 13941 ELSQLHSMSSK 11 1 0 Unmodified _ELSQLHSMSSK_ 0 0 0 REV__C9K080 REV__C9K080 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2069 3 416.208055 1245.60234 NaN NaN NaN NaN NaN NaN NaN NaN NaN 17.968 1 17.968 17.468 18.468 0 0 0 0 0.054658 1 5050 41.704 15.587 1 + 8875 2172 3348 3435 13942 13942 ELSQLHSMSSK 11 1 0 Unmodified _ELSQLHSMSSK_ 0 0 0 REV__C9K080 REV__C9K080 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2087 3 416.208055 1245.60234 94851 -0.044618 -1.857E-05 0.33007 0.00013738 0.28546 0.00011881 416.208256735709 418.879523937416 17.976 0.52618 17.976 17.785 18.311 0 87 31 4 0 0 0 0.002504 2 4787 40.496 26.687 1 0.76604 0.77196 0 7423700 3724600 3699100 + 8876 2172 3348 3435 13943;13944 13943 ELSQLQAAQEK 11 1 0 Unmodified _ELSQLQAAQEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.8276 2 622.827692 1243.64083 NaN NaN NaN -0.21986 -0.00013693 NaN NaN NaN NaN 35.301 0.36176 35.301 35.092 35.453 0 0 0 0 6.636E-12 1 17733 124.81 60.541 1 NaN NaN 0 6070000 6070000 0 8877 1581 3349 3436 13945 13945 ELSQLQAAQEK 11 1 0 Unmodified _ELSQLQAAQEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.837 2 622.827692 1243.64083 78556.17 0.95569 0.00059523 -0.57203 -0.00035628 0.38366 0.00023895 622.828086460072 626.835230476041 34.414 0.34738 34.414 34.241 34.589 0 96 25 6 0 0 0 7.936E-31 2 17404 179.09 123.72 1 1.1272 1.2046 0 23091000 10574000 12517000 8878 1581 3349 3436 13946;13947 13946 ELSQLQAAQEK 11 1 0 Unmodified _ELSQLQAAQEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8353 2 622.827692 1243.64083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.2 1 40.2 39.7 40.7 0 0 0 0 0.00039361 1 18490 77.192 45.237 1 8879 1581 3349 3436 13948 13948 ELSQLQAAQEK 11 1 0 Unmodified _ELSQLQAAQEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.8349 2 622.827692 1243.64083 77517.34 0.30869 0.00019226 -0.070371 -4.3829E-05 0.23832 0.00014843 622.827956262682 626.835127993956 40.29 0.36015 40.29 40.165 40.525 0 106 30 5 0 0 0 0.0013294 2 18031 68.335 52.921 1 1.466 1.1908 0 2892200 1145500 1746700 8880 1581 3349 3436 13949;13950 13949 ELSQNTDESGLNDEAIAK 18 1 0 Unmodified _ELSQNTDESGLNDEAIAK_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 971.4612 2 967.452898 1932.89124 62960.84 0.029623 2.8659E-05 0.60252 0.00058291 0.63214 0.00061157 967.954928196113 971.460483515831 56.684 0.51119 56.684 56.462 56.973 3.8147E-06 213 46 7 0 0 0 4.4729E-08 2 31874 95.417 86.31 1 0.3843 0.37647 0 21723000 16022000 5700300 8881 1542 3350 3437 13951;13952 13952 ELSQNTDESGLNDEAIAK 18 1 0 Unmodified _ELSQNTDESGLNDEAIAK_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 971.4615 2 967.452898 1932.89124 NaN NaN NaN 0.46058 0.00044559 NaN NaN NaN NaN 55.845 0.41872 55.845 55.62 56.039 0 0 0 0 8.3995E-13 1 31970 100.22 87.662 1 NaN NaN 0 8729200 0 8729200 8882 1542 3350 3437 13953 13953 ELSQNTDESGLNDEAIAK 18 1 0 Unmodified _ELSQNTDESGLNDEAIAK_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 971.9626 2 967.452898 1932.89124 61424.96 0.089378 8.6469E-05 0.71648 0.00069316 0.80586 0.00077963 967.955371830383 971.460370206021 66.32 0.59773 66.32 66.012 66.609 0 169 32 7 0 0 0 0.0086524 1 34276 30.484 29.045 1 0.68351 0.54684 0 7128300 4182900 2945400 8883 1542 3350 3437 13954 13954 ELSTTLNADEAVTR 14 0 1 Unmodified _ELSTTLNADEAVTR_ 0 0 0 O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;B4DT47;B4DIZ3;B4DUS3;B4E354;B4E0H6 O14992 O14992 HS24/p52;HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.3866 2 760.383559 1518.75257 NaN NaN NaN -0.14146 -0.00010756 NaN NaN NaN NaN 66.09 0.26509 66.09 65.963 66.228 0 0 0 0 4.1456E-06 2 38151 96.64 70.608 1 NaN NaN 0 4194200 0 4194200 8884 404 3351 3438 13955;13956 13956 ELSTTLNADEAVTR 14 0 1 Unmodified _ELSTTLNADEAVTR_ 0 0 0 O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;B4DT47;B4DIZ3;B4DUS3;B4E354;B4E0H6 O14992 O14992 HS24/p52;HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.3884 2 760.383559 1518.75257 75434.59 0.36718 0.0002792 -0.10993 -8.3593E-05 0.25724 0.0001956 760.382903653326 765.387597899617 65.163 0.41361 65.163 64.922 65.336 0 72 33 4 0 0 0 3.2073E-06 2 38321 103.21 103.21 1 1.9414 1.9325 0 8038600 2700700 5338000 8885 404 3351 3438 13957;13958 13957 ELSVEEQIK 9 1 0 Unmodified _ELSVEEQIK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.7879 2 537.787504 1073.56045 NaN NaN NaN 0.42682 0.00022954 NaN NaN NaN NaN 52.193 0.77641 52.193 51.871 52.647 0 0 0 0 4.9492E-05 1 29018 104.44 58.757 1 NaN NaN 0 36683000 36683000 0 8886 1010 3352 3439 13959 13959 ELSVEEQIK 9 1 0 Unmodified _ELSVEEQIK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.7943 2 537.787504 1073.56045 82736.67 0.64337 0.000346 0.057094 3.0704E-05 0.70047 0.0003767 537.787643590284 541.794514181192 51.06 0.8438 51.06 50.644 51.488 0 299 66 6 0 0 0 2.2298E-05 3 28726 116.25 71.901 1 2.3585 2.636 0 98295000 29128000 69167000 8887 1010 3352 3439 13960;13961;13962 13960 ELTAPDENIPAK 12 1 0 Unmodified _ELTAPDENIPAK_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.3366 2 649.33535 1296.65615 75028.07 0.77762 0.00050494 0.10275 6.6719E-05 0.88037 0.00057166 649.335530147892 653.342515215424 53.677 0.9762 53.677 53.381 54.358 3.8147E-06 525 77 10 0 0 0 4.2452E-08 4 29942 115.82 103.3 1 1.0514 1.2704 0 1644600000 787080000 857540000 8888 1470 3353 3440 13963;13964;13965;13966 13964 ELTAPDENIPAK 12 1 0 Unmodified _ELTAPDENIPAK_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.3358 2 649.33535 1296.65615 75172.95 0.70896 0.00046035 0.082403 5.3507E-05 0.79136 0.00051386 649.335594255835 653.342487063389 52.708 1.2207 52.708 52.166 53.387 -3.8147E-06 641 100 11 0 0 0 7.4627E-05 2 29925 97.277 85.684 1 1.0752 1.2696 0 1084500000 509320000 575140000 8889 1470 3353 3440 13967;13968 13968 ELTAPDENIPAK 12 1 0 Unmodified _ELTAPDENIPAK_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.336 2 649.33535 1296.65615 74283.42 0.5408 0.00035116 0.050934 3.3073E-05 0.59173 0.00038423 649.335680027702 653.342424140223 62.497 1.9159 62.497 62.012 63.928 0 873 163 12 0 0 0 0.00474 3 32336 52.725 50.284 1 1.5489 1.3638 0 247720000 103430000 144290000 8890 1470 3353 3440 13969;13970;13971 13970 ELTAPDENIPAK 12 1 0 Unmodified _ELTAPDENIPAK_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.3433 2 649.33535 1296.65615 74180.73 0.40862 0.00026533 0.0055235 3.5866E-06 0.41415 0.00026892 649.335406931405 653.342401922951 63.069 2.1815 63.069 62.657 64.838 0 948 186 10 0 0 0 0.0011872 3 31966 61.78 61.78 1 1.5036 1.2955 0 181710000 70830000 110880000 8891 1470 3353 3440 13972;13973;13974 13973 ELTAVVQK 8 1 0 Unmodified _ELTAVVQK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.2703 2 444.263468 886.512382 90141.39 0.034119 1.5158E-05 0.19703 8.7533E-05 0.23115 0.00010269 444.263469879592 448.270514250397 34.768 1.1969 34.768 34.245 35.442 -3.8147E-06 424 104 6 0 0 0 0.010603 2 17576 71.852 46.958 1 1.1436 1.2918 0 107330000 47297000 60029000 8892 1511 3354 3441 13975;13976 13976 ELTAVVQK 8 1 0 Unmodified _ELTAVVQK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 444.2639 2 444.263468 886.512382 89819.86 0.20071 8.9167E-05 0.075696 3.3629E-05 0.2764 0.0001228 444.263438137689 448.270548105651 34.228 0.98443 34.228 33.66 34.645 0 366 76 8 0 0 0 0.019676 3 17073 58.981 38.528 1 1.3152 1.5189 0 193460000 95416000 98040000 8893 1511 3354 3441 13977;13978;13979 13978 ELTELAR 7 0 1 Unmodified _ELTELAR_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573;B3KMA6;Q6PIM8 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 421.2358 2 416.232168 830.449782 94681.34 0.42525 0.000177 -0.070759 -2.9452E-05 0.35449 0.00014755 416.232027885633 421.236081226136 38.392 0.60715 38.392 37.995 38.602 0 122 51 5 0 0 0 0.027742 1 19649 73.039 8.2624 1 1.3002 1.3062 0 17258000 8236600 9021500 8894 150 3355 3442 13980 13980 ELTGGGTTFSVR 12 0 1 Unmodified _ELTGGGTTFSVR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41 A0A024R4W4 A0A024R4W4 BRD1 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8162 2 612.814584 1223.61462 75603.03 0.43527 0.00026674 0.17616 0.00010795 0.61143 0.00037469 612.814893773024 617.818718170126 58.808 0.62053 58.808 58.53 59.151 0 218 49 6 0 0 0 0.01851 1 33273 40.727 27.938 1 0.89634 0.92902 0 22872000 11485000 11387000 8895 162 3356 3443 13981 13981 ELTGGGTTFSVR 12 0 1 Unmodified _ELTGGGTTFSVR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41 A0A024R4W4 A0A024R4W4 BRD1 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.819 2 612.814584 1223.61462 76752.78 0.49123 0.00030103 0.51616 0.00031631 1.0074 0.00061734 612.815091071308 617.81897987647 57.858 0.51617 57.858 57.54 58.056 0 162 41 7 0 0 0 4.2647E-08 3 33552 115.78 75.736 1 0.80093 0.8769 0 32602000 16699000 15903000 8896 162 3356 3443 13982;13983;13984 13984 ELTLENSELK 10 1 0 Unmodified _ELTLENSELK_ 0 0 0 P49454;Q9UHT7;A0A087WTY4 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.3186 2 588.311343 1174.60813 NaN NaN NaN -0.76887 -0.00045233 NaN NaN NaN NaN 63.984 0.62054 63.984 63.759 64.379 0 0 0 0 0.0034089 1 36700 76.679 40.122 1 NaN NaN 0 4789800 0 4789800 8897 1581 3357 3444 13985 13985 ELTLENSELK 10 1 0 Unmodified _ELTLENSELK_ 0 0 0 P49454;Q9UHT7;A0A087WTY4 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.3173 2 588.311343 1174.60813 83010.75 0.43647 0.00025678 -0.21859 -0.0001286 0.21788 0.00012818 588.311165227468 592.318175276469 62.885 0.63976 62.885 62.622 63.262 0 209 56 6 0 0 0 0.00012052 1 36909 96.668 36.232 1 1.2929 1.3112 0 12890000 5255400 7634800 8898 1581 3357 3444 13986 13986 ELTMASLPFTFDVER 15 0 1 Oxidation (M) _ELTM(ox)ASLPFTFDVER_ ELTM(1)ASLPFTFDVER ELTM(73.63)ASLPFTFDVER 0 1 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 891.9386 2 886.432195 1770.84984 65530.4 1.4343 0.0012714 -0.77577 -0.00068767 0.65851 0.00058373 886.933177617935 891.43544538233 118.45 0.389 118.45 118.28 118.67 0 86 22 5 0 0 0 0.00010968 1 76035 73.632 62.313 1 1.3534 1.3835 0 10003000 3747900 6255300 8899 903 3358 3445 13987 13987 726 ELTMASLPFTFDVER 15 0 1 Oxidation (M) _ELTM(ox)ASLPFTFDVER_ ELTM(1)ASLPFTFDVER ELTM(96.74)ASLPFTFDVER 0 1 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 891.4359 2 886.432195 1770.84984 NaN NaN NaN -0.48904 -0.0004335 NaN NaN NaN NaN 117.98 0.41335 117.98 117.79 118.2 0 0 0 0 2.3261E-07 1 77503 96.745 85.839 1 NaN NaN 0 6527000 0 6527000 8900 903 3358 3445 13988 13988 726 ELTMASLPFTFDVER 15 0 1 Oxidation (M) _ELTM(ox)ASLPFTFDVER_ ELTM(1)ASLPFTFDVER ELTM(42.1)ASLPFTFDVER 0 1 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.9332 2 886.432195 1770.84984 NaN NaN NaN 0.95445 0.00084606 NaN NaN NaN NaN 117.98 0.334 117.98 117.85 118.18 0 0 0 0 0.0068672 1 77575 42.095 32.663 1 NaN NaN 0 4214400 4214400 0 8901 903 3358 3445 13989 13989 726 ELTNQQEASVER 12 0 1 Unmodified _ELTNQQEASVER_ 0 0 0 Q6AWB3;Q6AWB1;E7EX90;Q6MZZ3;Q14203;O95654;Q59F36;H8Y0Y3 Q6AWB3 Q6AWB3 DKFZp686E191;DKFZp686E0752;DCTN1;DKFZp686I0746;DCTN1/ALK fusion Dynactin subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.347 2 702.341694 1402.66884 NaN NaN NaN 0.82413 0.00057882 NaN NaN NaN NaN 25.081 0.31112 25.081 24.908 25.219 1.9073E-06 0 0 0 0.00039609 1 10691 89.403 39.363 1 NaN NaN 0 15577000 0 15577000 8902 1226 3359 3446 13990 13990 ELTTEIDNNIEQISSYK 17 1 0 Unmodified _ELTTEIDNNIEQISSYK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 998.9886 2 998.989117 1995.96368 NaN NaN NaN -0.27362 -0.00027334 NaN NaN NaN NaN 94.858 0.47066 94.858 94.597 95.068 -7.6294E-06 0 0 0 3.3671E-13 1 57692 113.24 99.839 1 NaN NaN 0 19439000 19439000 0 + 8903 1161 3360 3447 13991 13991 ELTTEIDNNIEQISSYK 17 1 0 Unmodified _ELTTEIDNNIEQISSYK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 999.4874 2 998.989117 1995.96368 NaN NaN NaN 0.2833 0.00028301 NaN NaN NaN NaN 102.93 0.97984 102.93 102.44 103.42 0 0 0 0 7.7018E-05 1 63163 71.558 63.253 1 NaN NaN 0 207520000 207520000 0 + 8904 1161 3360 3447 13992 13992 ELTTEIDNNIEQISSYK 17 1 0 Unmodified _ELTTEIDNNIEQISSYK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 999.4844 2 998.989117 1995.96368 NaN NaN NaN -0.24422 -0.00024398 NaN NaN NaN NaN 102.3 0.93468 102.3 101.95 102.88 0 0 0 0 1.057E-06 1 64294 83.617 75.104 1 NaN NaN 0 242540000 242540000 0 + 8905 1161 3360 3447 13993 13993 ELTTEIDNNIEQISSYK 17 1 0 Unmodified _ELTTEIDNNIEQISSYK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 999.4927 2 998.989117 1995.96368 NaN NaN NaN 0.5019 0.00050139 NaN NaN NaN NaN 108.05 0.68721 108.05 107.82 108.51 7.6294E-06 0 0 0 4.2885E-09 1 61978 98.337 91.135 1 NaN NaN 0 12192000 12192000 0 + 8906 1161 3360 3447 13994 13994 ELTTEIDNNIEQISSYK 17 1 0 Unmodified _ELTTEIDNNIEQISSYK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 999.4903 2 998.989117 1995.96368 NaN NaN NaN 0.14667 0.00014653 NaN NaN NaN NaN 114.98 1.0424 114.98 114.71 115.75 7.6294E-06 0 0 0 4.5675E-166 1 67157 255.16 255.16 1 NaN NaN 0 244030000 244030000 0 + 8907 1161 3360 3447 13995 13995 ELTTEIDNNIEQISSYK 17 1 0 Unmodified _ELTTEIDNNIEQISSYK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 998.9894 2 998.989117 1995.96368 NaN NaN NaN 0.48835 0.00048786 NaN NaN NaN NaN 108.13 0.67918 108.13 107.85 108.53 -7.6294E-06 0 0 0 2.5949E-26 1 61121 133.15 126.92 1 NaN NaN 0 14362000 14362000 0 + 8908 1161 3360 3447 13996 13996 ELTTEIDNNIEQISSYK 17 1 0 Unmodified _ELTTEIDNNIEQISSYK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 999.491 2 998.989117 1995.96368 NaN NaN NaN -0.1056 -0.00010549 NaN NaN NaN NaN 114.88 0.72396 114.88 114.64 115.37 7.6294E-06 0 0 0 2.4203E-125 1 66212 227.57 212.69 1 NaN NaN 0 169180000 169180000 0 + 8909 1161 3360 3447 13997 13997 ELTVDNSFEFEK 12 1 0 Unmodified _ELTVDNSFEFEK_ 0 0 0 B3KP47;A0A024R5U8;Q9UHA3;H3BMQ2 B3KP47 B3KP47 C15orf15;RSL24D1 Probable ribosome biogenesis protein RLP24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.3507 2 729.343372 1456.67219 70301.79 0.59709 0.00043548 0.41092 0.0002997 1.008 0.00073518 729.343465638521 733.350758037855 87.415 1.0583 87.415 86.861 87.919 0 510 96 6 0 0 0 1.1843E-17 2 52561 137.98 137.98 1 1.0001 1.1276 0 76390000 33335000 43055000 8910 188 3361 3448 13998;13999 13998 ELTVDNSFEFEK 12 1 0 Unmodified _ELTVDNSFEFEK_ 0 0 0 B3KP47;A0A024R5U8;Q9UHA3;H3BMQ2 B3KP47 B3KP47 C15orf15;RSL24D1 Probable ribosome biogenesis protein RLP24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.3505 2 729.343372 1456.67219 70374.03 0.467 0.00034061 0.45103 0.00032895 0.91803 0.00066956 729.343614093182 733.350741593636 86.701 1.11 86.701 86.146 87.256 0 495 96 8 0 0 0 1.8516E-22 2 53446 150.61 150.61 1 1.0139 1.135 0 110010000 54125000 55887000 8911 188 3361 3448 14000;14001 14001 ELTVDNSFEFEK 12 1 0 Unmodified _ELTVDNSFEFEK_ 0 0 0 B3KP47;A0A024R5U8;Q9UHA3;H3BMQ2 B3KP47 B3KP47 C15orf15;RSL24D1 Probable ribosome biogenesis protein RLP24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.8526 2 729.343372 1456.67219 70529.66 0.56866 0.00041475 0.19921 0.00014529 0.76787 0.00056004 729.343325104109 733.350740220993 99.892 1.0131 99.892 99.482 100.5 0 390 78 8 0 0 0 0.00018248 2 56383 82.261 82.261 1 1.0644 0.86214 0 24110000 12048000 12062000 8912 188 3361 3448 14002;14003 14003 ELTVDNSFEFEK 12 1 0 Unmodified _ELTVDNSFEFEK_ 0 0 0 B3KP47;A0A024R5U8;Q9UHA3;H3BMQ2 B3KP47 B3KP47 C15orf15;RSL24D1 Probable ribosome biogenesis protein RLP24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 733.3521 2 729.343372 1456.67219 71405.54 0.52041 0.00037956 0.14075 0.00010266 0.66116 0.00048221 729.343331010559 733.350633980825 99.864 0.94488 99.864 99.48 100.42 0 456 83 7 0 0 0 0.0001724 3 55486 91.549 91.549 1 1.0685 0.85502 0 21395000 9095700 12299000 8913 188 3361 3448 14004;14005;14006 14004 ELVEPLTPSGEAPNQALLR 19 0 1 Unmodified _ELVEPLTPSGEAPNQALLR_ 0 0 0 Q59FL8;Q504U8;E7BSV0;E9PFD7;F2YGG7;Q2TTR7;A9CB80;A8K2T7;P00533 Q59FL8 Q59FL8 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1022.5493 2 1017.54694 2033.07932 NaN NaN NaN 0.4155 0.00042279 NaN NaN NaN NaN 104.5 0.37127 104.5 104.3 104.68 0 0 0 0 0.0028051 1 64649 46.88 37.925 1 NaN NaN 0 4054200 0 4054200 8914 713 3362 3449 14007 14007 ELVEPLTPSGEAPNQALLR 19 0 1 Unmodified _ELVEPLTPSGEAPNQALLR_ 0 0 0 Q59FL8;Q504U8;E7BSV0;E9PFD7;F2YGG7;Q2TTR7;A9CB80;A8K2T7;P00533 Q59FL8 Q59FL8 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1022.5493 2 1017.54694 2033.07932 NaN NaN NaN 0.70471 0.00071707 NaN NaN NaN NaN 103.76 0.42915 103.76 103.57 104 0 0 0 0 5.0509E-06 2 65668 68.034 45.456 1 NaN NaN 0 5035900 0 5035900 8915 713 3362 3449 14008;14009 14009 ELVGEFLQFVQLDK 14 1 0 Unmodified _ELVGEFLQFVQLDK_ 0 0 0 Q86XI2;B3KRQ2;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 836.9564 2 832.948338 1663.88212 66688.44 0.61356 0.00051106 0.4582 0.00038166 1.0718 0.00089272 833.450390466841 836.95547460348 133.45 0.22322 133.45 133.32 133.54 0 24 5 7 0 0 0 8.2133E-05 2 87456 88.187 73.767 1 0.85521 0.96963 0 93927000 48637000 45290000 8916 1887 3363 3450 14010;14011 14011 ELVGEFLQFVQLDK 14 1 0 Unmodified _ELVGEFLQFVQLDK_ 0 0 0 Q86XI2;B3KRQ2;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.9554 2 832.948338 1663.88212 66744.97 0.22902 0.00019076 0.16021 0.00013344 0.38923 0.00032421 833.449959741609 837.457028448205 133.38 0.63136 133.38 133 133.63 0 48 17 8 0 0 0 1.6624E-132 2 89587 255.3 243.99 1 0.86458 0.97314 0 70560000 36078000 34482000 8917 1887 3363 3450 14012;14013 14013 ELVGEFLQFVQLDK 14 1 0 Unmodified _ELVGEFLQFVQLDK_ 0 0 0 Q86XI2;B3KRQ2;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 833.3953 2 832.948338 1663.88212 65934.59 1.0062 0.00083815 0.38257 0.00031866 1.3888 0.0011568 833.450651142306 836.955834209586 134.87 0.19141 134.87 134.76 134.95 0 12 3 5 0 0 0 0.00048597 1 81633 60.49 47.913 1 2.5542 2.0971 0 12343000 4216000 8126900 8918 1887 3363 3450 14014 14014 ELVGPPLAETVFTPK 15 1 0 Unmodified _ELVGPPLAETVFTPK_ 0 0 0 P49792 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.4547 2 799.445431 1596.87631 NaN NaN NaN 0.60985 0.00048754 NaN NaN NaN NaN 114.54 0.4532 114.54 114.35 114.8 0 0 0 0 2.1488E-05 1 74534 88.803 72.549 1 NaN NaN 0 7396300 0 7396300 8919 1588 3364 3451 14015 14015 ELVLALYDYQEK 12 1 0 Unmodified _ELVLALYDYQEK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 746.3943 2 742.387582 1482.76061 NaN NaN NaN 0.52127 0.00038699 NaN NaN NaN NaN 117.65 0.40643 117.65 117.46 117.87 -7.6294E-06 0 0 0 0.015754 1 69340 52.79 33.519 1 NaN NaN 0 898650 0 898650 8920 523 3365 3452 14016 14016 ELVNDDEDIDWVQTEK 16 1 0 Unmodified _ELVNDDEDIDWVQTEK_ 0 0 0 B5BUK7;B2RCZ4;P41743 B5BUK7 B5BUK7 PRKCI Protein kinase C;Protein kinase C iota type MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 978.4529 2 974.444542 1946.87453 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.741 1 91.741 91.241 92.241 -7.6294E-06 0 0 0 0.0076601 1 56811 48.659 38.334 1 8921 884 3366 3453 14017 14017 ELVPSSDPIVFVVGAFAHGK 20 1 0 Unmodified _ELVPSSDPIVFVVGAFAHGK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.7099 3 690.373719 2068.09933 73077.04 0.91163 0.00062937 -0.0081762 -5.6447E-06 0.90345 0.00062372 690.708006293841 693.37942195445 132.17 1.3096 132.17 131.64 132.95 0 576 82 8 0 0 0 2.9126E-09 5 86039 87.85 87.85 1 1.0759 1.1576 0 33092000 15391000 17700000 8922 759 3367 3454 14018;14019;14020;14021;14022 14020 ELVPSSDPIVFVVGAFAHGK 20 1 0 Unmodified _ELVPSSDPIVFVVGAFAHGK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.7089 3 690.373719 2068.09933 73069.87 1.0061 0.00069456 -0.14844 -0.00010248 0.85763 0.00059208 690.707828069745 693.379292532019 131.53 1.3499 131.53 130.94 132.29 0 659 98 9 0 0 0 4.7643E-10 4 88244 98.062 98.062 1 1.1239 1.2369 0 42708000 20949000 21760000 8923 759 3367 3454 14023;14024;14025;14026 14025 ELVPSSDPIVFVVGAFAHGK 20 1 0 Unmodified _ELVPSSDPIVFVVGAFAHGK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.0443 3 690.373719 2068.09933 75461.15 0.67033 0.00046278 -1.0383 -0.00071682 -0.36798 -0.00025405 690.70744412254 693.044184608331 134.83 0.37529 134.83 134.62 135 0 23 7 7 0 0 0 0.00014503 1 82581 36.481 27.197 1 1.2587 1.0327 0 37165000 13452000 23713000 8924 759 3367 3454 14027 14027 ELVSCSNCTDYQAR 14 0 1 Unmodified _ELVSCSNCTDYQAR_ 0 0 0 Q0VGA5;Q53HA4;Q5T5C7;P49591 Q0VGA5 Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 856.8668 2 851.861611 1701.70867 NaN NaN NaN 0.10786 9.1882E-05 NaN NaN NaN NaN 38.139 0.20412 38.139 38.065 38.27 0 0 0 0 1.9674E-06 1 19537 101.39 87.158 1 NaN NaN 0 3921900 0 3921900 8925 1584 3368 3455 14028 14028 ELVSCSNCTDYQAR 14 0 1 Unmodified _ELVSCSNCTDYQAR_ 0 0 0 Q0VGA5;Q53HA4;Q5T5C7;P49591 Q0VGA5 Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.3656 2 851.861611 1701.70867 NaN NaN NaN -0.052877 -4.5044E-05 NaN NaN NaN NaN 37.238 0.26186 37.238 37.079 37.341 0 0 0 0 0.00027573 2 19226 82.171 67.48 1 NaN NaN 0 4233900 0 4233900 8926 1584 3368 3455 14029;14030 14029 ELVSDANQHVK 11 1 0 Unmodified _ELVSDANQHVK_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;C9J9C1 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.3217 2 620.320034 1238.62551 79370.93 0.647 0.00040135 0.000875 5.4278E-07 0.64788 0.00040189 620.320034840893 624.327379667937 21.477 0.42758 21.477 21.215 21.643 0 69 21 6 0 0 0 1.2885E-05 1 7734 107.69 78.607 1 1.3333 1.3744 0 14592000 7090700 7501300 8927 723 3369 3456 14031 14031 ELVSDANQHVK 11 1 0 Unmodified _ELVSDANQHVK_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;C9J9C1 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.3207 2 620.320034 1238.62551 78559.89 0.35746 0.00022174 0.11796 7.3174E-05 0.47542 0.00029491 620.320357704164 624.32755706978 23.39 0.33025 23.39 23.249 23.579 0 70 16 6 0 0 0 0.021429 2 7882 43.272 26.939 1 0.91855 0.77199 0 2155500 1237800 917730 8928 723 3369 3456 14032;14033 14032 ELVSDANQHVK 11 1 0 Unmodified _ELVSDANQHVK_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;C9J9C1 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.3286 2 620.320034 1238.62551 77626.73 0.32135 0.00019934 0.10541 6.539E-05 0.42677 0.00026473 620.320104673063 624.327132264239 23.318 0.33606 23.318 23.149 23.485 0 68 14 6 0 0 0 0.019604 1 7360 44.203 16.461 1 0.99627 0.77772 0 2213700 1075700 1138100 8929 723 3369 3456 14034 14034 ELVSDLSSQFVISPPALR 18 0 1 Unmodified _ELVSDLSSQFVISPPALR_ 0 0 0 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.0399 2 979.533298 1957.05204 65737.83 0.48767 0.00047769 -0.60914 -0.00059667 -0.12147 -0.00011899 979.532172024477 984.53737031509 123.95 0.42758 123.95 123.74 124.17 0 126 29 6 0 0 0 8.9617E-08 2 80437 109 109 1 0.87233 0.89565 0 10117000 5143300 4973900 8930 1945 3370 3457 14035;14036 14036 ELVSDLSSQFVISPPALR 18 0 1 Unmodified _ELVSDLSSQFVISPPALR_ 0 0 0 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 979.5288 2 979.533298 1957.05204 64406.97 0.37506 0.00036738 -0.27813 -0.00027244 0.096926 9.4943E-05 980.033866572492 985.039247206467 123.62 0.46676 123.62 123.36 123.83 0 132 32 6 0 0 0 3.4461E-05 1 82050 88.101 88.101 1 0.89786 0.90073 0 11251000 6665400 4585200 8931 1945 3370 3457 14037 14037 ELVSDTNQHVK 11 1 0 Unmodified _ELVSDTNQHVK_ 0 0 0 A8K8B0;P30154;B7Z1G3;H0YDG7 A8K8B0 A8K8B0 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.3322 2 635.325316 1268.63608 NaN NaN NaN -0.57229 -0.00036359 NaN NaN NaN NaN 20.408 0.17047 20.408 20.322 20.493 0 0 0 0 8.6219E-08 1 6857 106.42 81.647 1 NaN NaN 0 2971400 0 2971400 8932 774 3371 3458 14038 14038 ELVSDTNQHVK 11 1 0 Unmodified _ELVSDTNQHVK_ 0 0 0 A8K8B0;P30154;B7Z1G3;H0YDG7 A8K8B0 A8K8B0 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.3324 2 635.325316 1268.63608 NaN NaN NaN 0.98653 0.00062677 NaN NaN NaN NaN 20.335 0.22486 20.335 20.192 20.417 0 0 0 0 2.369E-05 1 6615 102.62 74.403 1 NaN NaN 0 7303000 0 7303000 8933 774 3371 3458 14039 14039 ELVSSSSSGSDSDSEVDK 18 1 0 Unmodified _ELVSSSSSGSDSDSEVDK_ 0 0 0 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.4033 2 907.892339 1813.77013 64624.8 0.52351 0.00047529 0.27323 0.00024806 0.79674 0.00072335 908.393834801459 911.899681818478 27.943 0.32236 27.943 27.796 28.119 -1.9073E-06 98 21 6 0 0 0 8.2985E-30 2 13007 140.82 104.4 1 1.4873 1.6026 0 33834000 11124000 22710000 8934 1608 3372 3459 14040;14041 14040 ELVSSSSSGSDSDSEVDK 18 1 0 Unmodified _ELVSSSSSGSDSDSEVDK_ 0 0 0 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 911.9003 2 907.892339 1813.77013 64516.5 0.26438 0.00024003 0.52072 0.00047276 0.78511 0.00071279 908.393978558465 912.401614385089 27.443 0.27538 27.443 27.3 27.576 -1.9073E-06 74 13 8 0 0 0 1.6541E-107 2 12696 218.5 182.14 1 1.9865 2.1133 0 36309000 12071000 24238000 8935 1608 3372 3459 14042;14043 14042 ELVSSSSSGSDSDSEVDK 18 1 0 Unmodified _ELVSSSSSGSDSDSEVDK_ 0 0 0 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 911.9017 2 907.892339 1813.77013 63607.09 0.22354 0.00020295 0.45857 0.00041633 0.68211 0.00061928 907.892719061934 911.900031729352 32.079 0.37951 32.079 31.89 32.269 0 129 20 9 0 0 0 0.00028802 2 13662 46.964 39.353 1 0.5176 0.40189 0 14645000 9701900 4942900 8936 1608 3372 3459 14044;14045 14045 ELVSSSSSGSDSDSEVDK 18 1 0 Unmodified _ELVSSSSSGSDSDSEVDK_ 0 0 0 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 907.8921 2 907.892339 1813.77013 63333.71 0.35539 0.00032266 0.16303 0.00014801 0.51842 0.00047067 907.892590243107 911.899624061885 32.318 0.41408 32.318 32.164 32.578 0 131 21 9 0 0 0 6.5949E-06 2 13378 82.55 65.918 1 0.54398 0.44925 0 11478000 7120400 4357300 8937 1608 3372 3459 14046;14047 14047 ELVSSSSSGSDSDSEVDKK 19 2 0 Unmodified _ELVSSSSSGSDSDSEVDKK_ 0 0 1 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.2969 3 648.295639 1941.86509 74390.66 0.57286 0.00037138 0.13522 8.7661E-05 0.70808 0.00045904 648.296137968909 653.638290636833 20.964 0.48247 20.964 20.708 21.19 0 89 21 8 0 0 0 6.3541E-06 1 7302 43.116 39.511 1 1.4467 1.7066 0 14868000 6004500 8863300 8938 1608 3373 3460 14048 14048 ELVSSSSSGSDSDSEVDKK 19 2 0 Unmodified _ELVSSSSSGSDSDSEVDKK_ 0 0 1 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.9548 2 971.939821 1941.86509 63441.51 0.059656 5.7982E-05 0.36557 0.00035532 0.42523 0.0004133 972.441618886179 979.954370297684 20.917 0.23113 20.917 20.844 21.075 0 48 11 6 0 0 0 2.5649E-16 2 7339 145.43 145.43 1 1.9304 2.1682 0 6501000 1910900 4590100 8939 1608 3373 3460 14049;14050 14050 ELVSSSSSGSDSDSEVDKK 19 2 0 Unmodified _ELVSSSSSGSDSDSEVDKK_ 0 0 1 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 972.4439 2 971.939821 1941.86509 63389.94 0.22586 0.00021952 0.24477 0.0002379 0.47063 0.00045742 971.939719841972 979.954477507268 20.78 0.28301 20.78 20.697 20.98 0 29 10 5 0 0 0 4.6944E-08 2 7099 94.717 86.851 1 1.3419 1.5275 0 8293500 3177100 5116400 8940 1608 3373 3460 14051;14052 14052 ELVSSSSSGSDSDSEVDKK 19 2 0 Unmodified _ELVSSSSSGSDSDSEVDKK_ 0 0 1 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.2957 3 648.295639 1941.86509 75606.69 0.66753 0.00043276 0.32455 0.0002104 0.99208 0.00064316 648.296701081183 653.638597594816 20.825 0.46191 20.825 20.569 21.031 0 68 17 8 0 0 0 1.0378E-06 1 7092 62.362 58.758 1 1.4732 1.6843 0 16229000 6337500 9891700 8941 1608 3373 3460 14053 14053 ELVSSSSSGSDSDSEVDKK 19 2 0 Unmodified _ELVSSSSSGSDSDSEVDKK_ 0 0 1 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.2958 3 648.295639 1941.86509 75333.77 0.48932 0.00031722 -0.21575 -0.00013987 0.27357 0.00017735 648.295690425969 653.638033687031 23.209 0.66617 23.209 23.032 23.699 0 114 32 8 0 0 0 5.5789E-06 2 7713 49.768 46.22 1 0.53692 0.46042 0 8135000 5930000 2204900 8942 1608 3373 3460 14054;14055 14054 ELVSSSSSGSDSDSEVDKK 19 2 0 Unmodified _ELVSSSSSGSDSDSEVDKK_ 0 0 1 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 971.9401 2 971.939821 1941.86509 61642.81 -0.18269 -0.00017756 0.35861 0.00034855 0.17592 0.00017099 971.940172202139 979.954183180819 23.193 0.31374 23.193 23.032 23.346 1.9073E-06 75 14 8 0 0 0 0.058043 1 7747 22.431 22.431 1 0.54898 0.48203 0 2765200 1802400 962790 8943 1608 3373 3460 14056 14056 ELVSSSSSGSDSDSEVDKK 19 2 0 Unmodified _ELVSSSSSGSDSDSEVDKK_ 0 0 1 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.6301 3 648.295639 1941.86509 75379.32 0.42617 0.00027628 -0.060749 -3.9383E-05 0.36542 0.0002369 648.295628203457 653.638378735852 23.277 0.40706 23.277 23.078 23.485 0 98 17 8 0 0 0 2.2781E-05 2 7304 45.916 42.312 1 0.52589 0.44624 0 6141000 4086000 2055000 8944 1608 3373 3460 14057;14058 14057 ELVVTQLGYDTR 12 0 1 Unmodified _ELVVTQLGYDTR_ 0 0 0 Q01813;B1APP6;V9GY25 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.3745 2 697.369724 1392.72489 73632.14 0.60745 0.00042362 0.32647 0.00022767 0.93392 0.00065129 697.370805903944 702.373573795784 97.75 0.65712 97.75 97.493 98.15 0 188 45 6 0 0 0 0.0002099 2 55054 80.763 63.327 1 1.2066 1.0227 0 5061000 2091100 2969900 8945 1677 3374 3461 14059;14060 14059 ELVVTQLGYDTR 12 0 1 Unmodified _ELVVTQLGYDTR_ 0 0 0 Q01813;B1APP6;V9GY25 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.3732 2 697.369724 1392.72489 73202.92 0.45925 0.00032026 0.20076 0.00014001 0.66001 0.00046027 697.370256140795 702.373732272703 97.653 0.68269 97.653 97.347 98.029 0 159 38 6 0 0 0 0.00073439 2 54124 66.595 48.731 1 1.2746 1.1166 0 4189800 1828000 2361800 8946 1677 3374 3461 14061;14062 14061 ELVYPPDYNPEGK 13 1 0 Unmodified _ELVYPPDYNPEGK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.8746 2 760.867014 1519.71947 70411.3 0.71332 0.00054274 -0.062007 -4.7179E-05 0.65132 0.00049557 760.867052303542 764.87414941586 75.324 1.1675 75.324 74.844 76.012 -7.6294E-06 586 97 9 0 0 0 7.5482E-05 3 44196 94.616 87.957 1 0.3501 0.41307 0 352730000 254790000 97932000 8947 82 3375 3462 14063;14064;14065 14064 ELVYPPDYNPEGK 13 1 0 Unmodified _ELVYPPDYNPEGK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.8739 2 760.867014 1519.71947 70168.73 0.69043 0.00052532 0.0062724 4.7725E-06 0.6967 0.0005301 760.86705887981 764.874134398539 74.317 1.3029 74.317 73.85 75.153 -7.6294E-06 630 112 9 0 0 0 1.5897E-05 2 44606 99.568 93.596 1 0.3668 0.42779 0 261040000 186780000 74262000 8948 82 3375 3462 14066;14067 14067 ELVYPPDYNPEGK 13 1 0 Unmodified _ELVYPPDYNPEGK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 760.868 2 760.867014 1519.71947 70673.46 0.56008 0.00042615 0.16114 0.00012261 0.72123 0.00054876 760.867193689845 764.874134275746 85.887 1.3854 85.887 85.375 86.76 0 500 91 10 0 0 0 0.00079839 2 47258 60.434 54.462 1 0.29058 0.23919 0 40015000 32857000 7157500 8949 82 3375 3462 14068;14069 14069 ELVYPPDYNPEGK 13 1 0 Unmodified _ELVYPPDYNPEGK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.3683 2 760.867014 1519.71947 70617.14 0.66616 0.00050686 -0.064331 -4.8948E-05 0.60183 0.00045791 760.8670452289 764.873852055516 86.07 1.7102 86.07 85.554 87.264 0 480 102 10 0 0 0 0.0066357 3 46733 45.972 40.001 1 0.27924 0.23239 0 39191000 31947000 7243300 8950 82 3375 3462 14070;14071;14072 14072 ELWFSDDPNVTK 12 1 0 Unmodified _ELWFSDDPNVTK_ 0 0 0 O95831;Q5RZA0;Q5RZ99 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.3562 2 725.846081 1449.67761 76862.53 0.75075 0.00054493 -0.79299 -0.00057559 -0.042239 -3.0659E-05 725.845323784907 729.852214034048 105.33 0.40588 105.33 105.04 105.44 0 66 25 4 0 0 0 0.060775 1 60030 30.872 20.349 1 1.4925 1.2131 0 2697900 1645000 1052900 8951 1431 3376 3463 14073 14073 ELWTILLGR 9 0 1 Unmodified _ELWTILLGR_ 0 0 0 Q5SRE5;H7C4K7 Q5SRE5 Q5SRE5 NUP188 Nucleoporin NUP188 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.8308 2 550.826766 1099.63898 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.72 1 123.72 123.22 124.22 0 0 0 0 0.022195 1 82202 55.531 27.018 1 8952 1816 3377 3464 14074 14074 ELYAGMPTIQITALEK 16 1 0 Oxidation (M) _ELYAGM(ox)PTIQITALEK_ ELYAGM(1)PTIQITALEK ELYAGM(83.14)PTIQITALEK 0 1 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.9731 2 897.47132 1792.92809 65832.17 0.81452 0.000731 -0.26333 -0.00023633 0.55119 0.00049467 897.471645559365 901.477957373695 106.52 0.49895 106.52 106.24 106.74 -7.6294E-06 152 35 6 0 0 0 2.7034E-05 2 66129 83.137 83.137 1 1.3115 1.2859 0 20671000 8043200 12628000 8953 897 3378 3465 14075;14076 14076 708 ELYAGMPTIQITALEK 16 1 0 Oxidation (M) _ELYAGM(ox)PTIQITALEK_ ELYAGM(1)PTIQITALEK ELYAGM(96.82)PTIQITALEK 0 1 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.472 2 897.47132 1792.92809 65696.55 0.80162 0.00071943 -0.54903 -0.00049274 0.25259 0.00022669 897.472199167103 901.477419672147 107.39 0.44133 107.39 107.17 107.61 0 194 33 8 0 0 0 5.039E-07 3 66890 96.82 96.82 1 1.3145 1.2896 0 20551000 8442500 12108000 8954 897 3378 3465 14077;14078;14079 14078 708 ELYAGMPTIQITALEK 16 1 0 Oxidation (M) _ELYAGM(ox)PTIQITALEK_ ELYAGM(1)PTIQITALEK ELYAGM(75.74)PTIQITALEK 0 1 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.4778 2 897.47132 1792.92809 66077.29 0.78739 0.00070666 -0.15053 -0.0001351 0.63686 0.00057157 897.973149285743 901.477634393432 105.94 0.47919 105.94 105.7 106.18 -7.6294E-06 188 36 8 0 0 0 7.0299E-05 2 67276 75.739 75.739 1 1.2439 1.2574 0 28740000 11741000 16999000 8955 897 3378 3465 14080;14081 14080 708 ELYAGMPTIQITALEK 16 1 0 Oxidation (M) _ELYAGM(ox)PTIQITALEK_ ELYAGM(1)PTIQITALEK ELYAGM(134.56)PTIQITALEK 0 1 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.973 2 897.47132 1792.92809 64937.45 0.74748 0.00067084 -0.1606 -0.00014413 0.58688 0.00052671 897.471742624032 901.477860091772 106.82 0.47026 106.82 106.6 107.07 7.6294E-06 177 35 7 0 0 0 3.4782E-18 3 68068 134.56 134.56 1 1.3414 1.3563 0 28796000 11745000 17051000 8956 897 3378 3465 14082;14083;14084 14084 708 ELYAGMPTIQITALEK 16 1 0 Oxidation (M) _ELYAGM(ox)PTIQITALEK_ ELYAGM(1)PTIQITALEK ELYAGM(68.68)PTIQITALEK 0 1 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.4789 2 897.47132 1792.92809 65191.4 0.71381 0.00064062 0.11191 0.00010043 0.82572 0.00074106 897.973087743728 901.478635591132 117.85 0.37431 117.85 117.67 118.05 0 91 16 7 0 0 0 7.4473E-05 1 69480 68.676 68.676 1 0.91284 0.72523 0 6550800 3144700 3406100 8957 897 3378 3465 14085 14085 708 ELYAGMPTIQITALEK 16 1 0 Oxidation (M) _ELYAGM(ox)PTIQITALEK_ ELYAGM(1)PTIQITALEK ELYAGM(62.09)PTIQITALEK 0 1 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.981 2 897.47132 1792.92809 64878.36 0.58625 0.00052614 -0.0040651 -3.6483E-06 0.58218 0.00052249 897.471840749312 901.478267104635 118.66 0.35778 118.66 118.48 118.83 0 112 18 8 0 0 0 7.3958E-05 1 70117 62.088 62.088 1 0.83763 0.6617 0 6062100 3162300 2899800 8958 897 3378 3465 14086 14086 708 ELYANVVLGDDSLNDCR 17 0 1 Unmodified _ELYANVVLGDDSLNDCR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 977.4567 2 976.954554 1951.89456 NaN NaN NaN 0.037635 3.6768E-05 NaN NaN NaN NaN 100.75 0.39174 100.75 100.55 100.94 0 0 0 0 0.041392 1 61755 34.179 26.454 1 NaN NaN 0 4478200 4478200 0 8959 406 3379 3466 14087 14087 ELYANVVLGDDSLNDCR 17 0 1 Unmodified _ELYANVVLGDDSLNDCR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.4587 2 976.954554 1951.89456 NaN NaN NaN 0.97299 0.00095057 NaN NaN NaN NaN 100.05 0.42937 100.05 99.896 100.33 0 0 0 0 0.0012681 1 62851 59.57 50.462 1 NaN NaN 0 6104800 6104800 0 8960 406 3379 3466 14088 14088 ELYGVGVEK 9 1 0 Unmodified _ELYGVGVEK_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.2669 2 497.266207 992.517862 86558.76 -0.0024117 -1.1992E-06 0.65161 0.00032402 0.64919 0.00032282 497.266603314851 501.273424018417 50.189 0.40247 50.189 50.003 50.406 0 115 38 4 0 0 0 0.0048471 1 27678 68.224 30.665 1 1.1248 1.1529 0 28517000 13931000 14586000 8961 391 3380 3467 14089 14089 ELYGVGVEK 9 1 0 Unmodified _ELYGVGVEK_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.2663 2 497.266207 992.517862 87826.1 0.045873 2.2811E-05 0.63894 0.00031772 0.68481 0.00034053 497.266477876673 501.273566734834 48.964 0.41722 48.964 48.788 49.205 -3.8147E-06 108 34 4 0 0 0 0.018567 1 27467 51.949 19.339 1 1.2236 1.3216 0 21886000 11013000 10873000 8962 391 3380 3467 14090 14090 ELYLEDSPLELK 12 1 0 Unmodified _ELYLEDSPLELK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.8875 2 724.87959 1447.74463 73034.19 0.65344 0.00047367 0.30215 0.00021902 0.95559 0.00069269 724.879865741198 728.886608232098 108.1 0.52836 108.1 107.87 108.4 -7.6294E-06 179 40 6 0 0 0 1.8229E-05 3 67378 104.22 95.64 1 0.84633 0.84702 0 18774000 10675000 8098800 8963 1937 3381 3468 14091;14092;14093 14092 ELYLEDSPLELK 12 1 0 Unmodified _ELYLEDSPLELK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.8801 2 724.87959 1447.74463 73378.87 0.74797 0.00054219 0.14109 0.00010227 0.88906 0.00064446 724.879662572413 728.886746080969 107.46 0.59959 107.46 107.24 107.84 0 176 41 7 0 0 0 0.00022526 1 68594 83.883 83.883 1 0.66975 0.68129 0 12518000 7558000 4960200 8964 1937 3381 3468 14094 14094 ELYLFDVLR 9 0 1 Unmodified _ELYLFDVLR_ 0 0 0 B4DY32;P08243 B4DY32 B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.3285 2 584.324057 1166.63356 NaN NaN NaN -0.66322 -0.00038753 NaN NaN NaN NaN 124.97 0.45204 124.97 124.82 125.27 7.6294E-06 0 0 0 0.017414 1 83139 60.91 41.124 1 NaN NaN 0 3707000 0 3707000 8965 1051 3382 3469 14095 14095 ELYQQLQR 8 0 1 Unmodified _ELYQQLQR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.2883 2 539.288005 1076.56146 NaN NaN NaN 0.70041 0.00037772 NaN NaN NaN NaN 42.187 0.35878 42.187 41.919 42.278 0 0 0 0 0.015955 1 22335 76.847 39.201 1 NaN NaN 0 23225000 23225000 0 8966 1754 3383 3470 14096 14096 ELYQQLQR 8 0 1 Unmodified _ELYQQLQR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.2918 2 539.288005 1076.56146 NaN NaN NaN -0.71195 -0.00038395 NaN NaN NaN NaN 48.529 0.626 48.529 48.161 48.787 0 0 0 0 0.0073227 1 23640 82.913 60.389 1 NaN NaN 0 1345500 0 1345500 8967 1754 3383 3470 14097 14097 ELYQQLQR 8 0 1 Unmodified _ELYQQLQR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.2924 2 539.288005 1076.56146 82635.53 0.2515 0.00013563 -0.13107 -7.0687E-05 0.12042 6.4942E-05 539.288432505262 544.292173826839 48.901 0.56842 48.901 48.555 49.123 0 102 44 4 0 0 0 0.02092 1 23260 58.167 36.639 1 3.8196 3.3684 0 1884900 507730 1377200 8968 1754 3383 3470 14098 14098 EMAAMCLGLAHSLSR 15 0 1 2 Oxidation (M) _EM(ox)AAM(ox)CLGLAHSLSR_ EM(1)AAM(1)CLGLAHSLSR EM(76.39)AAM(76.39)CLGLAHSLSR 0 2 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.5977 3 560.261837 1677.76368 81188.23 0.7711 0.00043202 -0.4789 -0.00026831 0.2922 0.00016371 560.261831087351 563.597845243935 55.509 0.36449 55.509 55.4 55.764 0 131 28 6 0 0 0 8.838E-05 2 31207 76.391 72.316 1 1.649 1.7029 0 23858000 10392000 13465000 8969 2129 3384 3471 14099;14100 14099 1957;1958 EMAAMCLGLAHSLSR 15 0 1 2 Oxidation (M) _EM(ox)AAM(ox)CLGLAHSLSR_ EM(1)AAM(1)CLGLAHSLSR EM(96.96)AAM(96.96)CLGLAHSLSR 0 2 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.5983 3 560.261837 1677.76368 80647.21 0.85532 0.00047921 -0.35808 -0.00020062 0.49724 0.00027859 560.261697293047 563.597889164641 54.461 0.45156 54.461 54.276 54.728 3.8147E-06 148 36 6 0 0 0 2.0826E-06 1 31122 96.962 94.433 1 1.7571 1.8708 0 24373000 9810500 14562000 8970 2129 3384 3471 14101 14101 1957;1958 EMAIPVLEAR 10 0 1 Oxidation (M) _EM(ox)AIPVLEAR_ EM(1)AIPVLEAR EM(40.35)AIPVLEAR 0 1 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.8055 2 572.805174 1143.59579 83711.79 0.60176 0.00034469 0.015566 8.9161E-06 0.61733 0.00035361 572.805555236901 577.809465899081 76.715 0.9817 76.715 76.298 77.28 0 177 83 5 0 0 0 0.017484 1 45176 40.352 40.352 1 2.1605 2.2482 0 10474000 3036000 7438100 8971 1611 3385 3472 14102 14102 1399 EMASCSAVVLEESK 14 1 0 Oxidation (M) _EM(ox)ASCSAVVLEESK_ EM(1)ASCSAVVLEESK EM(64.12)ASCSAVVLEESK 0 1 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.3602 2 778.352556 1554.69056 69871.65 0.86019 0.00066953 -0.5747 -0.00044732 0.28549 0.00022221 778.352647150195 782.359421469284 48.587 0.50415 48.587 48.366 48.87 0 125 36 6 0 0 0 0.00011466 2 26412 64.121 61.501 1 1.7778 1.8471 0 11439000 5464200 5975200 8972 503 3386 3473 14103;14104 14103 353 EMASCSAVVLEESK 14 1 0 Oxidation (M) _EM(ox)ASCSAVVLEESK_ EM(1)ASCSAVVLEESK EM(85.84)ASCSAVVLEESK 0 1 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.3627 2 778.352556 1554.69056 70240.41 0.75393 0.00058682 -0.1762 -0.00013715 0.57772 0.00044967 778.352586890381 782.359091874145 47.486 0.40216 47.486 47.269 47.671 3.8147E-06 84 26 4 0 0 0 4.6727E-05 1 26309 85.845 85.845 1 1.6987 1.794 0 20051000 8339400 11712000 8973 503 3386 3473 14105 14105 353 EMDLVGLGLHPLFSSR 16 0 1 Oxidation (M) _EM(ox)DLVGLGLHPLFSSR_ EM(1)DLVGLGLHPLFSSR EM(54.77)DLVGLGLHPLFSSR 0 1 0 Q8TDD1;H0YHH7 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.6451 3 596.310061 1785.90835 79872.06 0.94959 0.00056625 0.23241 0.00013859 1.182 0.00070484 596.311155284521 599.646267393576 111 0.65467 111 110.67 111.33 0 160 42 6 0 0 0 7.8498E-05 1 69753 54.768 54.768 1 1.3636 1.5069 0 57075000 26587000 30488000 8974 1933 3387 3474 14106 14106 1768 EMDLVGLGLHPLFSSR 16 0 1 Oxidation (M) _EM(ox)DLVGLGLHPLFSSR_ EM(1)DLVGLGLHPLFSSR EM(49.56)DLVGLGLHPLFSSR 0 1 0 Q8TDD1;H0YHH7 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.6465 3 596.310061 1785.90835 78586.29 0.78726 0.00046945 -0.18013 -0.00010741 0.60713 0.00036204 596.309848100178 599.980457905447 121.24 0.37749 121.24 121.05 121.43 0 91 16 9 0 0 0 0.00010684 1 72089 49.559 44.242 1 1.0178 0.86724 0 5514800 2680600 2834200 8975 1933 3387 3474 14107 14107 1768 EMDLVGLGLHPLFSSR 16 0 1 Unmodified _EMDLVGLGLHPLFSSR_ 0 0 0 Q8TDD1;H0YHH7 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.3147 3 590.978423 1769.91344 78883.63 0.58446 0.0003454 0.24282 0.0001435 0.82728 0.00048891 590.978357593081 594.314947648923 130.78 0.58733 130.78 130.6 131.18 0 100 25 8 0 0 0 0.02014 2 79220 16.88 16.88 1 1.487 1.2632 0 2880800 1127600 1753100 8976 1933 3387 3475 14108;14109 14108 EMDLVGLGLHPLFSSR 16 0 1 Unmodified _EMDLVGLGLHPLFSSR_ 0 0 0 Q8TDD1;H0YHH7 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.9791 3 590.978423 1769.91344 79757.41 0.94545 0.00055874 0.1147 6.7787E-05 1.0602 0.00062653 590.978310429411 594.314848891515 130.53 0.54526 130.53 130.3 130.84 0 82 22 8 0 0 0 0.0066943 2 78213 27.85 27.85 1 1.5375 1.3274 0 2729800 1003700 1726100 8977 1933 3387 3475 14110;14111 14111 EMDRETLIDVAR 12 0 2 Oxidation (M) _EM(ox)DRETLIDVAR_ EM(1)DRETLIDVAR EM(40.77)DRETLIDVAR 0 1 1 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8 Q59ET3 Q59ET3 CCT6A T-complex protein 1 subunit zeta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2484 3 488.576807 1462.70859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.128 1 51.128 50.628 51.628 0 0 0 0 0.011408 1 28943 40.767 29.497 1 8978 389 3388 3476 14112 14112 281 EMEAELEDERK 11 1 1 Oxidation (M) _EM(ox)EAELEDERK_ EM(1)EAELEDERK EM(88.68)EAELEDERK 0 1 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.8093 2 697.808839 1393.60312 NaN NaN NaN 0.48256 0.00033674 NaN NaN NaN NaN 18.505 0.31116 18.505 18.261 18.572 0 0 0 0 0.00038654 1 5457 88.681 75.327 1 NaN NaN 0 12661000 12661000 0 8979 81 3389 3477 14113 14113 56 EMEAELEDERK 11 1 1 Oxidation (M) _EM(ox)EAELEDERK_ EM(1)EAELEDERK EM(52.25)EAELEDERK 0 1 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.5491 3 465.541651 1393.60312 86965.38 0.078108 3.6362E-05 0.41487 0.00019314 0.49298 0.0002295 465.542587209432 471.548984402212 18.412 0.44646 18.412 18.17 18.617 0 38 17 6 0 0 0 0.0026155 1 5161 52.247 50.108 1 1.7226 2.01 0 46319000 16159000 30159000 8980 81 3389 3477 14114 14114 56 EMEAELEDERK 11 1 1 Oxidation (M) _EM(ox)EAELEDERK_ EM(1)EAELEDERK EM(50.98)EAELEDERK 0 1 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.8204 2 697.808839 1393.60312 71835.3 0.097446 6.7999E-05 0.56764 0.0003961 0.66508 0.0004641 697.809540217029 706.820354769839 19.855 0.32587 19.855 19.739 20.065 0 96 18 6 0 0 0 0.019243 1 5405 50.978 50.978 1 1.6687 1.4875 0 2158700 801130 1357500 8981 81 3389 3477 14115 14115 56 EMEAELEDERK 11 1 1 Unmodified _EMEAELEDERK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.8221 2 689.811381 1377.60821 72074.7 0.52899 0.0003649 0.19602 0.00013522 0.72501 0.00050012 689.811691339216 698.822181353528 31.667 0.50198 31.667 31.465 31.967 -1.9073E-06 128 27 8 0 0 0 2.8165E-05 1 12912 106.16 105.81 1 2.8987 2.4455 0 3845800 960840 2884900 8982 81 3389 3478 14116 14116 EMEENFAVEAANYQDTIGR 19 0 1 Oxidation (M) _EM(ox)EENFAVEAANYQDTIGR_ EM(1)EENFAVEAANYQDTIGR EM(155.43)EENFAVEAANYQDTIGR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1101.9845 2 1101.98404 2201.95353 57931.01 0.70673 0.0007788 -0.16544 -0.00018231 0.54129 0.00059649 1102.48562079857 1106.98809296096 90.911 0.82721 90.911 90.521 91.348 0 447 68 10 0 0 0 5.6818E-40 4 54783 155.43 152.72 1 1.8609 2.1089 0 106740000 41414000 65323000 8983 1457 3390 3479 14117;14118;14119;14120 14118 1171 EMEENFAVEAANYQDTIGR 19 0 1 Oxidation (M) _EM(ox)EENFAVEAANYQDTIGR_ EM(1)EENFAVEAANYQDTIGR EM(134.21)EENFAVEAANYQDTIGR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1102.4839 2 1101.98404 2201.95353 57726.28 0.38386 0.00042301 -0.12429 -0.00013697 0.25957 0.00028604 1102.48550193709 1106.98818136429 90.288 0.75484 90.288 89.914 90.669 0 534 66 10 0 0 0 3.522E-23 3 55612 134.21 126.66 1 1.757 2.0009 0 131060000 45991000 85074000 8984 1457 3390 3479 14121;14122;14123 14123 1171 EMEENFAVEAANYQDTIGR 19 0 1 Unmodified _EMEENFAVEAANYQDTIGR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1099.4915 2 1093.98658 2185.95861 57888.68 0.29217 0.00031963 0.54908 0.00060069 0.84124 0.00092031 1093.98747407291 1099.49275015663 111.23 0.4649 111.23 110.99 111.45 0 118 19 9 0 0 0 0.0044906 2 64314 32.523 27.444 1 3.6438 3.0349 0 10675000 2705600 7969900 8985 1457 3390 3480 14124;14125 14124 EMEENFAVEAANYQDTIGR 19 0 1 Unmodified _EMEENFAVEAANYQDTIGR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1099.4924 2 1093.98658 2185.95861 58224.47 0.1467 0.00016048 -0.048234 -5.2767E-05 0.098463 0.00010772 1093.98586355641 1098.9909997734 111.23 0.50093 111.23 110.97 111.47 0 131 23 9 0 0 0 5.7812E-05 1 63385 49.216 49.216 1 3.5821 2.9166 0 9688200 2278700 7409500 8986 1457 3390 3480 14126 14126 EMFDAEYDEGESTYFDDLK 19 1 0 Oxidation (M) _EM(ox)FDAEYDEGESTYFDDLK_ EM(1)FDAEYDEGESTYFDDLK EM(61.17)FDAEYDEGESTYFDDLK 0 1 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1160.9591 2 1160.45973 2318.9049 58344.51 0.42407 0.00049211 -0.39664 -0.00046028 0.027432 3.1833E-05 1160.96078763562 1164.96782650035 102.08 0.65597 102.08 101.72 102.38 0 243 52 7 0 0 0 1.0246E-05 2 62671 61.167 61.167 1 1.2403 1.2921 0 12317000 5901200 6415900 8987 1742 3391 3481 14127;14128 14128 1586 EMFDAEYDEGESTYFDDLK 19 1 0 Oxidation (M) _EM(ox)FDAEYDEGESTYFDDLK_ EM(1)FDAEYDEGESTYFDDLK EM(66.53)FDAEYDEGESTYFDDLK 0 1 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1164.9692 2 1160.45973 2318.9049 58484 0.17297 0.00020072 -0.24426 -0.00028345 -0.071292 -8.2731E-05 1160.45928914916 1164.96819084412 101.51 0.64721 101.51 101.19 101.84 0 224 51 7 0 0 0 7.6276E-06 2 63758 66.533 66.533 1 1.2876 1.2863 0 14139000 5801100 8338100 8988 1742 3391 3481 14129;14130 14129 1586 EMFDAEYDEGESTYFDDLK 19 1 0 Oxidation (M) _EM(ox)FDAEYDEGESTYFDDLK_ EM(1)FDAEYDEGESTYFDDLK EM(54.52)FDAEYDEGESTYFDDLK 0 1 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1160.962 2 1160.45973 2318.9049 57384.41 0.44141 0.00051224 -0.39972 -0.00046386 0.041688 4.8377E-05 1160.96106988709 1164.96797604018 114.03 0.54482 114.03 113.76 114.31 0 130 23 8 0 0 0 1.6037E-05 1 66538 54.524 54.524 1 1.1307 0.89463 0 4165800 1965100 2200700 8989 1742 3391 3481 14131 14131 1586 EMFEDTVEER 10 0 1 Oxidation (M) _EM(ox)FEDTVEER_ EM(1)FEDTVEER EM(105.52)FEDTVEER 0 1 0 Q6FHQ0;Q16576;E9PC52;A8K6A2 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.7759 2 650.771725 1299.5289 73268.9 0.65358 0.00042533 -0.067189 -4.3725E-05 0.58639 0.0003816 650.771763758514 655.775907331873 40.131 0.46101 40.131 39.896 40.357 3.8147E-06 235 37 9 0 0 0 4.6564E-06 2 20839 105.52 98.3 1 1.125 1.2829 0 119640000 59349000 60287000 8990 1771 3392 3482 14132;14133 14132 1642 EMFEDTVEER 10 0 1 Oxidation (M) _EM(ox)FEDTVEER_ EM(1)FEDTVEER EM(116.52)FEDTVEER 0 1 0 Q6FHQ0;Q16576;E9PC52;A8K6A2 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.776 2 650.771725 1299.5289 75267.7 0.77436 0.00050393 -0.13825 -8.9968E-05 0.63611 0.00041396 650.771635933308 655.775747066238 40.658 0.67134 40.658 40.357 41.028 0 291 59 6 0 0 0 2.2572E-08 2 21372 116.52 109.3 1 1.2061 1.3133 0 51133000 24241000 26892000 8991 1771 3392 3482 14134;14135 14134 1642 EMFEDTVEER 10 0 1 Oxidation (M) _EM(ox)FEDTVEER_ EM(1)FEDTVEER EM(84.21)FEDTVEER 0 1 0 Q6FHQ0;Q16576;E9PC52;A8K6A2 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.772 2 650.771725 1299.5289 73912.84 0.70149 0.00045651 -0.29935 -0.00019481 0.40214 0.0002617 650.771562813075 655.775792283824 39.172 0.62042 39.172 38.857 39.477 0 304 54 8 0 0 0 0.00029191 2 20547 84.213 76.992 1 1.211 1.3818 0 93521000 44693000 48828000 8992 1771 3392 3482 14136;14137 14137 1642 EMFEDTVEER 10 0 1 Oxidation (M) _EM(ox)FEDTVEER_ EM(1)FEDTVEER EM(117.89)FEDTVEER 0 1 0 Q6FHQ0;Q16576;E9PC52;A8K6A2 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.7757 2 650.771725 1299.5289 74912.41 1.0447 0.00067985 -0.05905 -3.8428E-05 0.98563 0.00064142 650.771528663934 655.775795488179 39.741 0.72336 39.741 39.389 40.112 0 287 61 6 0 0 0 1.9283E-08 2 21096 117.89 110.67 1 1.1184 1.2992 0 63658000 30147000 33511000 8993 1771 3392 3482 14138;14139 14138 1642 EMFEDTVEER 10 0 1 Oxidation (M) _EM(ox)FEDTVEER_ EM(1)FEDTVEER EM(46.82)FEDTVEER 0 1 0 Q6FHQ0;Q16576;E9PC52;A8K6A2 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.7726 2 650.771725 1299.5289 75046.72 0.5523 0.00035942 -0.12222 -7.9538E-05 0.43008 0.00027988 650.771797778126 655.775866032858 46.225 0.7142 46.225 45.966 46.68 0 264 48 8 0 0 0 0.0096962 1 22141 46.819 46.819 1 1.112 0.95068 0 5849200 2642800 3206400 8994 1771 3392 3482 14140 14140 1642 EMFEDTVEER 10 0 1 Oxidation (M) _EM(ox)FEDTVEER_ EM(1)FEDTVEER EM(73.98)FEDTVEER 0 1 0 Q6FHQ0;Q16576;E9PC52;A8K6A2 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.7767 2 650.771725 1299.5289 75293.52 0.50361 0.00032773 -0.061893 -4.0278E-05 0.44171 0.00028746 650.771606359077 655.775882500904 47.05 0.83368 47.05 46.618 47.452 0 257 62 5 0 0 0 0.00066136 2 22638 73.985 68.619 1 1.1067 0.93216 0 4625700 2273700 2352000 8995 1771 3392 3482 14141;14142 14141 1642 EMFEDTVEER 10 0 1 Oxidation (M) _EM(ox)FEDTVEER_ EM(1)FEDTVEER EM(53.68)FEDTVEER 0 1 0 Q6FHQ0;Q16576;E9PC52;A8K6A2 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.7722 2 650.771725 1299.5289 74869.76 0.28175 0.00018336 0.0115 7.4836E-06 0.29325 0.00019084 650.771822991953 655.775901355043 46.609 0.78865 46.609 46.231 47.02 0 223 48 7 0 0 0 0.0049399 2 21826 53.683 53.683 1 1.1452 0.96727 0 4729700 2280100 2449600 8996 1771 3392 3482 14143;14144 14144 1642 EMFEDTVEER 10 0 1 Oxidation (M) _EM(ox)FEDTVEER_ EM(1)FEDTVEER EM(52.58)FEDTVEER 0 1 0 Q6FHQ0;Q16576;E9PC52;A8K6A2 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.7769 2 650.771725 1299.5289 75224.35 0.28896 0.00018805 0.15157 9.8636E-05 0.44053 0.00028668 650.771802660864 655.776009070059 47.532 0.79393 47.532 46.993 47.787 0 215 59 5 0 0 0 0.0053332 1 22314 52.579 47.613 1 1.1663 0.96759 0 5123400 2485000 2638400 8997 1771 3392 3482 14145 14145 1642 EMFPYEASTPTGISASCR 18 0 1 Oxidation (M) _EM(ox)FPYEASTPTGISASCR_ EM(1)FPYEASTPTGISASCR EM(58.32)FPYEASTPTGISASCR 0 1 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1015.9507 2 1010.44296 2018.87138 62143.29 0.97942 0.00098965 -0.87501 -0.00088414 0.10442 0.00010551 1010.9441675659 1015.94821928607 80.804 0.38715 80.804 80.604 80.991 0 91 33 5 0 0 0 2.3794E-05 2 47963 58.32 58.32 1 1.0821 1.0934 0 7717500 3767100 3950500 8998 334 3393 3483 14146;14147 14146 254 EMGFTNMTEIQHK 13 1 0 2 Oxidation (M) _EM(ox)GFTNM(ox)TEIQHK_ EM(1)GFTNM(1)TEIQHK EM(90.83)GFTNM(90.83)TEIQHK 0 2 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.3591 2 799.35289 1596.69123 67441.44 0.81979 0.00065531 -0.53377 -0.00042667 0.28603 0.00022864 799.352965671242 803.36018580844 26.784 0.49321 26.784 26.555 27.048 0 108 31 7 0 0 0 0.00014459 1 12050 90.827 87.849 1 2.2321 2.2339 0 26659000 9327100 17332000 8999 303 3394 3484 14148 14148 220;221 EMGFTNMTEIQHK 13 1 0 2 Oxidation (M) _EM(ox)GFTNM(ox)TEIQHK_ EM(1)GFTNM(1)TEIQHK EM(85.96)GFTNM(85.96)TEIQHK 0 2 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.3607 2 799.35289 1596.69123 67684.68 0.60163 0.00048092 -0.33407 -0.00026704 0.26756 0.00021388 799.352623353264 803.360139218668 26.364 0.43491 26.364 26.105 26.54 0 117 23 7 0 0 0 0.00018639 2 11618 85.958 82.98 1 2.4454 2.492 0 30867000 10028000 20839000 9000 303 3394 3484 14149;14150 14149 220;221 EMGFTNMTEIQHK 13 1 0 2 Oxidation (M) _EM(ox)GFTNM(ox)TEIQHK_ EM(1)GFTNM(1)TEIQHK EM(94.69)GFTNM(94.69)TEIQHK 0 2 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.9091 3 533.237686 1596.69123 NaN NaN NaN -0.99792 -0.00053213 NaN NaN NaN NaN 26.367 0.54663 26.367 26.042 26.588 0 0 0 0 2.5765E-06 1 11714 94.688 90.058 1 NaN NaN 0 36099000 0 36099000 9001 303 3394 3484 14151 14151 220;221 EMILNPEGDVNSAK 14 1 0 Oxidation (M) _EM(ox)ILNPEGDVNSAK_ EM(1)ILNPEGDVNSAK EM(40.59)ILNPEGDVNSAK 0 1 0 B4DRP9;Q69YJ7;Q9NTZ6;B3KQH4 B4DRP9 B4DRP9 DKFZp667H197;RBM12 RNA-binding protein 12 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.8735 2 766.866688 1531.71882 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.735 1 55.735 55.235 56.235 0 0 0 0 0.022351 1 31980 40.589 21.809 1 9002 1027 3395 3485 14152 14152 809 EMKPVIFLDVFLPR 14 1 1 Oxidation (M) _EM(ox)KPVIFLDVFLPR_ EM(1)KPVIFLDVFLPR EM(80.96)KPVIFLDVFLPR 0 1 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.3238 3 573.98826 1718.94295 80866.3 1.0575 0.000607 -0.090009 -5.1664E-05 0.9675 0.00055534 573.988156633402 579.995909319919 124.68 0.46275 124.68 124.5 124.97 0 112 31 6 0 0 0 3.1418E-05 1 82949 80.96 80.96 1 0.85105 0.93711 0 6033700 3197200 2836500 9003 1665 3396 3486 14153 14153 1446 EMLESAVLPPEDMSQSGPSGSHPQGPR 27 0 1 2 Oxidation (M) _EM(ox)LESAVLPPEDM(ox)SQSGPSGSHPQGPR_ EM(1)LESAVLPPEDM(1)SQSGPSGSHPQGPR EM(51.3)LESAVLPPEDM(51.3)SQSGPSGSHPQGPR 0 2 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.1024 3 951.432367 2851.27527 NaN NaN NaN -0.19553 -0.00018603 NaN NaN NaN NaN 63.52 0.44474 63.52 63.259 63.703 0 0 0 0 4.6962E-07 3 36358 51.301 48.925 1 NaN NaN 0 9570300 0 9570300 9004 1740 3397 3487 14154;14155;14156 14154 1576;1577 EMLESAVLPPEDMSQSGPSGSHPQGPR 27 0 1 2 Oxidation (M) _EM(ox)LESAVLPPEDM(ox)SQSGPSGSHPQGPR_ EM(1)LESAVLPPEDM(1)SQSGPSGSHPQGPR EM(75.54)LESAVLPPEDM(75.54)SQSGPSGSHPQGPR 0 2 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 955.4379 3 951.432367 2851.27527 61799.05 0.44799 0.00042624 -0.31964 -0.00030411 0.12836 0.00012213 951.76614407252 955.102749512293 62.458 0.83456 62.458 61.983 62.817 0 289 77 8 0 0 0 7.8093E-19 2 36420 75.539 75.539 1 1.219 1.2319 0 19835000 8234900 11600000 9005 1740 3397 3487 14157;14158 14157 1576;1577 EMLGGEIIPR 10 0 1 Oxidation (M) _EM(ox)LGGEIIPR_ EM(1)LGGEIIPR EM(66.27)LGGEIIPR 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.3006 2 565.797349 1129.58014 80263.1 0.58951 0.00033354 1.0318 0.00058379 1.6213 0.00091734 565.797381891523 570.80112463404 71.24 1.1259 71.24 70.79 71.916 0 495 95 8 0 0 0 0.0014802 3 41647 66.27 54.501 1 0.87422 0.96788 0 61995000 29286000 32709000 9006 1770 3398 3488 14159;14160;14161 14161 1635 EMLGGEIIPR 10 0 1 Oxidation (M) _EM(ox)LGGEIIPR_ EM(1)LGGEIIPR EM(66.27)LGGEIIPR 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.7978 2 565.797349 1129.58014 79696.03 0.62058 0.00035112 0.57561 0.00032568 1.1962 0.0006768 565.797375477972 570.801175457106 69.943 1.0075 69.943 69.557 70.564 0 341 83 5 0 0 0 0.0014802 1 41545 66.27 56.682 1 0.94657 1.0847 0 83435000 46254000 37181000 9007 1770 3398 3488 14162 14162 1635 EMLGGEIIPR 10 0 1 Oxidation (M) _EM(ox)LGGEIIPR_ EM(1)LGGEIIPR EM(46.46)LGGEIIPR 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.7982 2 565.797349 1129.58014 80112.1 0.5607 0.00031724 0.28648 0.00016209 0.84718 0.00047933 565.797391713287 570.80146782332 81.445 0.90451 81.445 81.081 81.986 0 160 49 4 0 0 0 0.010126 1 43263 46.462 36.874 1 0.80923 0.7035 0 4287500 2215000 2072500 9008 1770 3398 3488 14163 14163 1635 EMLGPVTFIWK 11 1 0 Oxidation (M) _EM(ox)LGPVTFIWK_ EM(1)LGPVTFIWK EM(53.33)LGPVTFIWK 0 1 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8512 2 668.852124 1335.68969 76287.62 0.91909 0.00061473 -0.804 -0.00053776 0.11509 7.6976E-05 668.851812692305 673.360623004603 116.36 0.46819 116.36 116.14 116.61 0 137 31 6 0 0 0 0.0034095 1 74179 53.327 53.327 1 0.30175 0.30292 0 7487800 5343200 2144500 9009 1965 3399 3489 14164 14164 1811 EMNEFIHK 8 1 0 Oxidation (M) _EM(ox)NEFIHK_ EM(1)NEFIHK EM(41.5)NEFIHK 0 1 0 Q8TEZ9;Q6PJQ9;Q8TF01 Q8TEZ9 Q8TEZ9 SFRS18;PNISR Arginine/serine-rich protein PNISR MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.254 2 532.247492 1062.48043 87255.42 0.45119 0.00024015 -0.23981 -0.00012764 0.21138 0.00011251 532.748656676569 536.254524676714 22.159 0.18911 22.159 22.074 22.263 0 26 9 4 0 0 0 0.027208 1 8329 41.502 18.483 1 1.4641 1.6052 0 3170800 1453700 1717000 9010 1857 3400 3490 14165 14165 1717 EMNPNYTEFK 10 1 0 Oxidation (M) _EM(ox)NPNYTEFK_ EM(1)NPNYTEFK EM(66.62)NPNYTEFK 0 1 0 Q68D16;A8MT37;A0A024R0L5;P49840;Q6FI27;B5BUC0;P49841 Q68D16;Q6FI27 Q68D16 DKFZp686D0638;GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.7856 2 644.779353 1287.54415 NaN NaN NaN 0.40742 0.00026269 NaN NaN NaN NaN 41.111 0.36015 41.111 40.972 41.332 0 0 0 0 0.002123 2 21616 66.621 45.751 1 NaN NaN 0 2376200 0 2376200 9011 51;1078 3401 3491 14166;14167 14167 28 EMNWLDYFALGGNK 14 1 0 Oxidation (M) _EM(ox)NWLDYFALGGNK_ EM(1)NWLDYFALGGNK EM(103.34)NWLDYFALGGNK 0 1 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.3845 2 837.385048 1672.75554 66027.04 0.85514 0.00071608 0.20355 0.00017045 1.0587 0.00088653 837.385073987286 841.392167007083 123.62 0.73371 123.62 123.28 124.01 0 380 52 11 0 0 0 1.5328E-06 2 80042 103.34 103.34 1 1.0859 1.1736 0 42584000 20302000 22282000 9012 1789 3402 3492 14168;14169 14169 1653 EMNWLDYFALGGNK 14 1 0 Oxidation (M) _EM(ox)NWLDYFALGGNK_ EM(1)NWLDYFALGGNK EM(97.73)NWLDYFALGGNK 0 1 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.8871 2 837.385048 1672.75554 65844.32 1.0826 0.00090655 -0.23335 -0.00019541 0.84925 0.00071115 837.384963297728 841.39204527883 123.19 0.71754 123.19 122.87 123.58 0 347 52 8 0 0 0 9.4548E-06 2 81643 97.734 91.762 1 1.1027 1.2244 0 49381000 22533000 26848000 9013 1789 3402 3492 14170;14171 14171 1653 EMQPTHPIR 9 0 1 Oxidation (M) _EM(ox)QPTHPIR_ EM(1)QPTHPIR EM(80.68)QPTHPIR 0 1 0 D0PNI1;P63104;B0AZS6;E7EX29;B7Z2E6;H0YB80;Q2F831;P27348;Q53S41;B4DMT8;B4DY04;V9HWD6;P31946;B5BU24 D0PNI1;P27348;V9HWD6 D0PNI1 YWHAZ;YWHAQ;HEL-S-1;YWHAB 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.7836 2 562.77949 1123.54443 83367.26 0.59629 0.00033558 -0.54171 -0.00030486 0.054586 3.072E-05 562.779184193438 567.783187781384 15.884 0.20383 15.884 15.782 15.986 0 37 10 6 0 0 0 0.00087251 2 3401 80.684 73.859 1 2.0897 2.1825 0 4850700 1693600 3157000 9014 1182;1523;1536 3403 3493 14172;14173 14172 892 EMQQSEAQINTAK 13 1 0 Unmodified _EMQQSEAQINTAK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.852 2 739.351205 1476.68786 69904.3 0.64753 0.00047875 -0.26034 -0.00019249 0.38719 0.00028627 739.350293620184 743.358431548064 28.159 0.48973 28.159 27.923 28.412 1.9073E-06 111 24 8 0 0 0 0.059694 1 11140 27.149 27.149 1 1.3355 1.0536 0 4079500 1841100 2238400 9015 899;1099 3404 3494 14174 14174 EMQQSEAQINTAK 13 1 0 Unmodified _EMQQSEAQINTAK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 743.3587 2 739.351205 1476.68786 71112.13 0.32057 0.00023702 -0.13185 -9.7481E-05 0.18873 0.00013953 739.351060083819 743.358385159447 28.493 0.4562 28.493 28.262 28.718 -1.9073E-06 143 27 8 0 0 0 0.01138 1 10814 40.616 40.616 1 1.3385 1.046 0 3413400 1719300 1694100 9016 899;1099 3404 3494 14175 14175 EMSVYEAYR 9 0 1 Oxidation (M) _EM(ox)SVYEAYR_ EM(1)SVYEAYR EM(60.44)SVYEAYR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.2601 2 582.255514 1162.49647 NaN NaN NaN -0.15457 -9E-05 NaN NaN NaN NaN 37.479 0.64579 37.479 37.203 37.849 0 0 0 0 0.0056119 1 19017 60.436 56.299 1 NaN NaN 0 3560900 0 3560900 9017 1754 3405 3495 14176 14176 1611 EMTDATNEEETEIK 14 1 0 Oxidation (M) _EM(ox)TDATNEEETEIK_ EM(1)TDATNEEETEIK EM(75.82)TDATNEEETEIK 0 1 0 B4DQV3;B3KXW2;A0A024R283;Q9HCE3;K7EIU3 B4DQV3 B4DQV3 ZNF532 Zinc finger protein 532 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.3519 2 828.351265 1654.68798 NaN NaN NaN -1.0443 -0.00086509 NaN NaN NaN NaN 27.97 0.14965 27.97 27.907 28.056 0 0 0 0 0.00027112 1 13223 75.819 67.09 1 NaN NaN 0 2847300 2847300 0 9018 108 3406 3496 14177 14177 94 EMVPEFVVPDLTGFK 15 1 0 Oxidation (M) _EM(ox)VPEFVVPDLTGFK_ EM(1)VPEFVVPDLTGFK EM(67.15)VPEFVVPDLTGFK 0 1 0 Q8IXM3 Q8IXM3 Q8IXM3 MRPL41 39S ribosomal protein L41, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 866.441 2 862.434206 1722.85386 66575.2 0.78361 0.00067581 -0.45768 -0.00039472 0.32593 0.00028109 862.93575181553 866.942728845591 124.38 0.33942 124.38 124.19 124.52 0 91 23 5 0 0 0 0.00010765 1 80733 67.153 61.308 1 1.6193 1.6416 0 5888900 2605500 3283400 9019 1894 3407 3497 14178 14178 1738 EMVPEFVVPDLTGFK 15 1 0 Oxidation (M) _EM(ox)VPEFVVPDLTGFK_ EM(1)VPEFVVPDLTGFK EM(72.65)VPEFVVPDLTGFK 0 1 0 Q8IXM3 Q8IXM3 Q8IXM3 MRPL41 39S ribosomal protein L41, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.9449 2 862.434206 1722.85386 66241.44 0.82802 0.00071411 -0.47668 -0.00041111 0.35134 0.000303 862.433783185597 866.440051243669 123.97 0.37935 123.97 123.78 124.16 0 98 25 6 0 0 0 0.00010937 1 82360 72.652 72.652 1 1.3393 1.3687 0 5074100 2454800 2619300 9020 1894 3407 3497 14179 14179 1738 ENAAYFQFFSDVR 13 0 1 Unmodified _ENAAYFQFFSDVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.3694 2 797.370255 1592.72596 69981.11 0.58848 0.00046924 0.39772 0.00031713 0.9862 0.00078637 797.370110432931 802.375124511203 114.3 0.49529 114.3 114.08 114.57 -7.6294E-06 102 35 4 0 0 0 0.00078464 1 72444 60.49 54.518 1 1.228 1.2742 0 10395000 4189400 6205600 9021 1754 3408 3498 14180 14180 ENAAYFQFFSDVR 13 0 1 Unmodified _ENAAYFQFFSDVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.3694 2 797.370255 1592.72596 70947.16 0.59056 0.0004709 0.21685 0.00017291 0.80741 0.00064381 797.36962194554 802.374962200167 113.74 0.492 113.74 113.47 113.96 0 141 35 5 0 0 0 0.00012705 3 73842 86.114 78.692 1 1.4189 1.4316 0 10380000 5043200 5336600 9022 1754 3408 3498 14181;14182;14183 14181 ENAAYFQFFSDVR 13 0 1 Unmodified _ENAAYFQFFSDVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 802.3748 2 797.370255 1592.72596 68598.65 0.80409 0.00064116 0.036983 2.9489E-05 0.84107 0.00067065 797.37033662327 802.374437551405 125.46 0.5641 125.46 125.19 125.76 0 74 20 6 0 0 0 7.3664E-05 1 75289 94.767 85.763 1 3.0576 2.5564 0 3613100 807470 2805600 9023 1754 3408 3498 14184 14184 ENAAYFQFFSDVR 13 0 1 Unmodified _ENAAYFQFFSDVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 802.3747 2 797.370255 1592.72596 69266.79 0.75995 0.00060597 0.051238 4.0856E-05 0.81119 0.00064682 797.871452179194 802.374381192462 125.33 0.4792 125.33 125.08 125.56 0 79 19 6 0 0 0 0.022552 1 74364 35.204 31.187 1 3.1749 2.8072 0 3921500 877980 3043500 9024 1754 3408 3498 14185 14185 ENAEVDGDDDAEEMEAK 17 1 0 Oxidation (M) _ENAEVDGDDDAEEM(ox)EAK_ ENAEVDGDDDAEEM(1)EAK ENAEVDGDDDAEEM(45.92)EAK 0 1 0 Q53XC0;P05198 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.3634 2 941.860182 1881.70581 64518.06 0.77143 0.00072658 -0.3333 -0.00031392 0.43813 0.00041266 941.85956344633 946.368382843447 22.786 0.3325 22.786 22.575 22.908 0 79 19 7 0 0 0 0.00034746 1 8727 45.915 45.915 1 1.874 1.9036 0 6253000 2186600 4066400 9025 1445 3409 3499 14186 14186 1151 ENAEVDGDDDAEEMEAK 17 1 0 Oxidation (M) _ENAEVDGDDDAEEM(ox)EAK_ ENAEVDGDDDAEEM(1)EAK ENAEVDGDDDAEEM(97.86)EAK 0 1 0 Q53XC0;P05198 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.868 2 941.860182 1881.70581 63889.6 0.62303 0.00058681 -0.25962 -0.00024452 0.36341 0.00034228 941.859974852487 945.867071722761 22.547 0.33418 22.547 22.367 22.701 0 65 13 7 0 0 0 1.1977E-07 2 8469 97.86 94.097 1 1.5625 1.559 0 5676600 1834900 3841700 9026 1445 3409 3499 14187;14188 14187 1151 ENAGEDPGLAR 11 0 1 Unmodified _ENAGEDPGLAR_ 0 0 0 P81605 P81605 P81605 DCD Dermcidin;Survival-promoting peptide;DCD-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.768 2 564.767634 1127.52072 NaN NaN NaN -0.19435 -0.00010976 NaN NaN NaN NaN 23.843 0.54822 23.843 23.556 24.104 0 0 0 0 0.0070774 1 9569 62.823 32.569 1 NaN NaN 0 28562000 28562000 0 9027 1666 3410 3500 14189 14189 ENAGEDPGLAR 11 0 1 Unmodified _ENAGEDPGLAR_ 0 0 0 P81605 P81605 P81605 DCD Dermcidin;Survival-promoting peptide;DCD-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.7671 2 564.767634 1127.52072 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.538 1 23.538 23.038 24.038 0 0 0 0 0.047667 1 9395 43.77 20.341 1 9028 1666 3410 3500 14190 14190 ENASPAPGTTAEEAMSR 17 0 1 Oxidation (M) _ENASPAPGTTAEEAM(ox)SR_ ENASPAPGTTAEEAM(1)SR ENASPAPGTTAEEAM(59.12)SR 0 1 0 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;H0Y710 A0A0G2JL47 A0A0G2JL47 BAT3;BAG6 Large proline-rich protein BAG6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.8862 2 867.883597 1733.75264 66850.61 0.74234 0.00064427 -0.77798 -0.0006752 -0.035639 -3.0931E-05 868.384875790428 872.886817104673 25.016 0.22482 25.016 24.916 25.14 0 32 11 5 0 0 0 5.2746E-05 1 10637 59.116 59.116 1 4.0035 4.0749 0 7141000 1385800 5755300 9029 368 3411 3501 14191 14191 275 ENASPAPGTTAEEAMSR 17 0 1 Oxidation (M) _ENASPAPGTTAEEAM(ox)SR_ ENASPAPGTTAEEAM(1)SR ENASPAPGTTAEEAM(105.19)SR 0 1 0 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;H0Y710 A0A0G2JL47 A0A0G2JL47 BAT3;BAG6 Large proline-rich protein BAG6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.8868 2 867.883597 1733.75264 67947.34 0.50715 0.00044015 -0.99059 -0.00085972 -0.48345 -0.00041957 867.883252278009 872.886447194169 24.893 0.25533 24.893 24.756 25.012 -1.9073E-06 32 10 5 0 0 0 2.0572E-09 2 10537 105.19 105.19 1 2.2319 2.2088 0 12357000 3402800 8954400 9030 368 3411 3501 14192;14193 14192 275 ENCPVPGKPGEAVAAR 16 1 1 Unmodified _ENCPVPGKPGEAVAAR_ 0 0 1 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.6129 3 551.278873 1650.81479 80736.38 0.47019 0.0002592 -0.058157 -3.2061E-05 0.41203 0.00022714 551.278981052497 557.286506375233 30.804 0.44736 30.804 30.531 30.979 1.9073E-06 151 40 6 0 0 0 0.0084576 2 15125 31.614 27.67 1 2.2454 2.5115 0 20884000 6797000 14087000 9031 252 3412 3502 14194;14195 14194 ENCPVPGKPGEAVAAR 16 1 1 Unmodified _ENCPVPGKPGEAVAAR_ 0 0 1 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.4272 2 826.414671 1650.81479 68561.4 1.0286 0.00085009 -0.074278 -6.1385E-05 0.95437 0.0007887 826.916411734021 835.426025965518 29.989 0.2264 29.989 29.853 30.079 -1.9073E-06 30 17 5 0 0 0 0.0010461 1 14612 60.161 52.595 1 4.3895 4.8632 0 8612600 1252100 7360500 9032 252 3412 3502 14196 14196 ENCPVPGKPGEAVAAR 16 1 1 Unmodified _ENCPVPGKPGEAVAAR_ 0 0 1 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.2785 3 551.278873 1650.81479 83025.09 0.30635 0.00016888 0.16951 9.3448E-05 0.47586 0.00026233 551.279334470421 557.286427356326 35.382 0.38174 35.382 35.206 35.588 0 124 33 6 0 0 0 0.03865 1 15697 16.123 11.807 1 1.3732 1.1511 0 3365300 1465400 1899900 9033 252 3412 3502 14197 14197 ENCPVPGKPGEAVAAR 16 1 1 Unmodified _ENCPVPGKPGEAVAAR_ 0 0 1 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.2863 3 551.278873 1650.81479 83543.53 0.6516 0.00035921 0.11954 6.5898E-05 0.77114 0.00042511 551.279690180023 557.28623927874 35.426 0.35063 35.426 35.316 35.667 0 104 28 6 0 0 0 0.0042384 1 15328 31.04 28.916 1 1.4443 1.2338 0 2863000 1018700 1844300 9034 252 3412 3502 14198 14198 ENDAHLVEVNLNNIK 15 1 0 Unmodified _ENDAHLVEVNLNNIK_ 0 0 0 Q5HYL6;Q9NYL9;H0YKU1;H0YNJ8 Q5HYL6 Q5HYL6 DKFZp686E1899;TMOD3 Tropomodulin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.3038 3 574.632081 1720.87441 83132.23 0.23175 0.00013317 0.21969 0.00012624 0.45144 0.00025941 574.63175841328 577.637948561873 92.563 0.49833 92.563 92.299 92.797 0 82 27 6 0 0 0 0.0037053 1 50739 34.302 34.302 1 2.0888 1.6962 0 2876700 1060800 1815800 9035 1808 3413 3503 14199 14199 ENDAVTIQVLNQLIQK 16 1 0 Unmodified _ENDAVTIQVLNQLIQK_ 0 0 0 Q96QK1;Q53FR4 Q96QK1 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.5117 2 913.50454 1824.99453 65189.63 0.4613 0.0004214 -0.77282 -0.00070597 -0.31152 -0.00028458 913.505035634038 918.012656941563 124.18 0.52414 124.18 123.97 124.49 0 77 36 4 0 0 0 1.7297E-24 1 80542 138.63 128.44 1 2.2267 2.2618 0 6470100 2346500 4123600 9036 1985 3414 3504 14200 14200 ENDAVTIQVLNQLIQK 16 1 0 Unmodified _ENDAVTIQVLNQLIQK_ 0 0 0 Q96QK1;Q53FR4 Q96QK1 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 917.5121 2 913.50454 1824.99453 NaN NaN NaN -1.5895 -0.0014521 NaN NaN NaN NaN 123.75 0.54131 123.75 123.57 124.11 7.6294E-06 0 0 0 1.8236E-12 1 82191 108.7 97.484 1 NaN NaN 0 3878700 0 3878700 9037 1985 3414 3504 14201 14201 ENDPEANIDTIYDR 14 0 1 Unmodified _ENDPEANIDTIYDR_ 0 0 0 Q14966;D6W5H1;A8K583;B4E187 Q14966 Q14966 ZNF638 Zinc finger protein 638 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.8744 2 832.873556 1663.73256 NaN NaN NaN 1.0467 0.00087177 NaN NaN NaN NaN 74.429 0.43657 74.429 74.212 74.648 0 0 0 0 0.00091135 1 43623 75.479 19.274 1 NaN NaN 0 8108500 8108500 0 9038 1746 3415 3505 14202 14202 ENDPEANIDTIYDR 14 0 1 Unmodified _ENDPEANIDTIYDR_ 0 0 0 Q14966;D6W5H1;A8K583;B4E187 Q14966 Q14966 ZNF638 Zinc finger protein 638 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.8789 2 832.873556 1663.73256 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.472 1 74.472 73.972 74.972 0 0 0 0 0.001699 1 43716 70.412 60.182 1 9039 1746 3415 3505 14203 14203 ENDPEANIDTIYDR 14 0 1 Unmodified _ENDPEANIDTIYDR_ 0 0 0 Q14966;D6W5H1;A8K583;B4E187 Q14966 Q14966 ZNF638 Zinc finger protein 638 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.8787 2 832.873556 1663.73256 66865.33 0.56312 0.00046901 0.96858 0.00080671 1.5317 0.0012757 832.874609704976 837.87796086575 73.436 0.48779 73.436 73.169 73.657 0 128 41 5 0 0 0 9.6448E-05 2 44068 85.845 76.656 1 0.57913 0.56864 0 13715000 7822500 5892000 9040 1746 3415 3505 14204;14205 14205 ENDPSSVLLFLVGSK 15 1 0 Unmodified _ENDPSSVLLFLVGSK_ 0 0 0 C9JY26;Q6NXT3;A0A024QZ68;Q9BZG1;C9JBG0;Q96PJ7;E7ES60 C9JY26 C9JY26 RAB34 Ras-related protein Rab-34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.939 2 802.930145 1603.84574 69707.98 1.1361 0.00091218 -0.022009 -1.7672E-05 1.114 0.0008945 803.431360480623 806.937146169991 132.37 0.58966 132.37 132.05 132.64 0 166 39 7 0 0 0 0.00022118 1 86369 65.563 63.423 1 2.7191 2.7418 0 10037000 2673800 7362900 9041 13 3416 3506 14206 14206 ENDPSSVLLFLVGSK 15 1 0 Unmodified _ENDPSSVLLFLVGSK_ 0 0 0 C9JY26;Q6NXT3;A0A024QZ68;Q9BZG1;C9JBG0;Q96PJ7;E7ES60 C9JY26 C9JY26 RAB34 Ras-related protein Rab-34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.9379 2 802.930145 1603.84574 68030.73 0.87849 0.00070536 0.17337 0.0001392 1.0519 0.00084457 802.930045006455 806.937427945465 131.99 0.55882 131.99 131.72 132.27 0 165 38 6 0 0 0 9.9787E-06 1 88291 93.011 93.011 1 2.5254 2.6421 0 10858000 3667800 7189800 9042 13 3416 3506 14207 14207 ENEFSFEDNAIK 12 1 0 Unmodified _ENEFSFEDNAIK_ 0 0 0 Q12873 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.8333 2 721.825346 1441.63614 71999.13 0.87755 0.00063344 0.073959 5.3386E-05 0.95151 0.00068683 721.825379715755 725.832299827325 91.371 0.53693 91.371 91.151 91.688 0 151 38 6 0 0 0 0.00021727 2 50747 82.261 77.648 1 1.6762 1.3269 0 4984500 1716100 3268400 9043 1701 3417 3507 14208;14209 14208 ENEFSFEDNAIK 12 1 0 Unmodified _ENEFSFEDNAIK_ 0 0 0 Q12873 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.8337 2 721.825346 1441.63614 72166.74 0.62916 0.00045414 -0.18861 -0.00013615 0.44054 0.000318 721.825058321645 725.832387082766 91.354 0.46507 91.354 91.142 91.607 0 141 34 5 0 0 0 0.00023548 2 49892 85.958 82.702 1 1.7672 1.4269 0 4319900 1406000 2913900 9044 1701 3417 3507 14210;14211 14211 ENEFSFEDNAIR 12 0 1 Unmodified _ENEFSFEDNAIR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.8333 2 735.82842 1469.64229 70923.55 0.4347 0.00031987 0.37114 0.0002731 0.80585 0.00059297 735.828639880788 740.832720206066 81.26 0.83886 81.26 80.937 81.776 0 462 72 9 0 0 0 7.6124E-13 2 48392 132.91 132.91 1 0.74514 0.85767 0 146870000 80493000 66374000 9045 515 3418 3508 14212;14213 14213 ENEFSFEDNAIR 12 0 1 Unmodified _ENEFSFEDNAIR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.833 2 735.82842 1469.64229 71042.25 0.72616 0.00053433 0.17093 0.00012578 0.89709 0.00066011 735.828501245283 740.832528752527 80.296 0.80365 80.296 79.939 80.743 7.6294E-06 436 63 10 0 0 0 7.7982E-39 2 48847 187.85 187.85 1 0.73585 0.84431 0 183590000 103860000 79739000 9046 515 3418 3508 14214;14215 14215 ENEFSFEDNAIR 12 0 1 Unmodified _ENEFSFEDNAIR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.8334 2 735.82842 1469.64229 71447.73 0.67534 0.00049693 0.11825 8.7013E-05 0.79359 0.00058394 735.828546609959 740.832537126404 93.035 0.79037 93.035 92.714 93.505 0 333 50 10 0 0 0 0.0002099 2 51813 80.763 80.763 1 1.8806 1.6121 0 41531000 15641000 25890000 9047 515 3418 3508 14216;14217 14217 ENEFSFEDNAIR 12 0 1 Unmodified _ENEFSFEDNAIR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.8323 2 735.82842 1469.64229 71604.6 0.47929 0.00035268 0.21306 0.00015678 0.69236 0.00050946 735.828650476392 740.832638761816 93.009 0.90022 93.009 92.69 93.59 0 323 56 10 0 0 0 3.0918E-08 2 50947 118.4 118.4 1 1.8238 1.5909 0 42585000 14330000 28255000 9048 515 3418 3508 14218;14219 14218 ENELQAGPWNTGR 13 0 1 Unmodified _ENELQAGPWNTGR_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.3516 2 736.349854 1470.68515 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.553 1 64.553 64.053 65.053 0 0 0 0 0.0082577 1 38008 55.401 28.728 1 9049 1396 3419 3509 14220 14220 ENEQSLLEYLEK 12 1 0 Unmodified _ENEQSLLEYLEK_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.87 2 747.869753 1493.72495 72057.22 0.73365 0.00054868 0.16182 0.00012102 0.89547 0.0006697 747.869857200595 752.378445347594 107.13 0.51124 107.13 106.88 107.39 7.6294E-06 99 34 4 0 0 0 0.00021114 3 68249 81.017 81.017 1 1.0558 1.1064 0 10787000 4766900 6020200 9050 1601 3420 3510 14221;14222;14223 14222 ENETLIQR 8 0 1 Unmodified _ENETLIQR_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.7703 2 501.764363 1001.51417 80931.07 0.67764 0.00034002 1.1262 0.00056508 1.8038 0.0009051 501.764396066735 506.769450772049 30.295 0.3158 30.295 30.136 30.452 0 98 26 5 0 0 0 0.0035323 1 14734 96.492 46.365 1 1.6483 1.6797 0 27098000 9467500 17630000 9051 1851 3421 3511 14224 14224 ENETLIQR 8 0 1 Unmodified _ENETLIQR_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.7646 2 501.764363 1001.51417 83715.94 1.0928 0.00054833 2.0098 0.0010085 3.1026 0.0015568 501.764312551519 506.768575175401 29.811 0.47196 29.811 29.617 30.089 0 148 35 8 0 0 0 0.0011918 2 14469 111.29 56.513 1 1.5096 1.7257 0 50506000 19979000 30527000 9052 1851 3421 3511 14225;14226 14226 ENETLIQR 8 0 1 Unmodified _ENETLIQR_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9 Q6P1J9 Q6P1J9 CDC73 Parafibromin MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.7636 2 501.764363 1001.51417 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.04 1 34.04 33.54 34.54 -3.8147E-06 0 0 0 0.021414 1 14991 67.032 28.24 1 9053 1851 3421 3511 14227 14227 ENEVEEVKEEGPK 13 2 0 Unmodified _ENEVEEVKEEGPK_ 0 0 1 Q63HR1;Q5VU21;D3DQ69;Q8NC51;D3DQ70 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.2534 3 505.910621 1514.71003 85781.39 0.24046 0.00012165 -0.082213 -4.1593E-05 0.15825 8.0059E-05 505.910462336269 511.253373975845 31.472 0.33822 31.472 31.252 31.59 0 71 22 5 0 0 0 0.0042673 1 13302 43.03 37.489 1 1.7674 1.5774 0 2005500 779560 1226000 9054 1832 3422 3512 14228 14228 ENEVSTSATDELLSQFK 17 1 0 Unmodified _ENEVSTSATDELLSQFK_ 0 0 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 949.7828 2 949.45491 1896.89527 62492.59 0.63601 0.00060386 -0.35423 -0.00033632 0.28178 0.00026754 949.453771589766 953.461725796039 108.24 0.49313 108.24 107.99 108.48 7.6294E-06 138 36 6 0 0 0 0.006238 1 67442 50.675 50.675 1 0.71642 0.72149 0 18494000 9934800 8558700 9055 354 3423 3513 14229 14229 ENEVSTSATDELLSQFK 17 1 0 Unmodified _ENEVSTSATDELLSQFK_ 0 0 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.4536 2 949.45491 1896.89527 64016.68 0.67716 0.00064293 -0.40638 -0.00038584 0.27078 0.00025709 949.956067018269 953.963797260554 107.7 0.51044 107.7 107.45 107.96 0 150 36 6 0 0 0 0.012741 1 68631 30.004 21.872 1 0.84209 0.86116 0 17392000 9865400 7526300 9056 354 3423 3513 14230 14230 ENFAGEATLQR 11 0 1 Unmodified _ENFAGEATLQR_ 0 0 0 E1A689;C0JYY2;P04114;E1B4S8;E1B4S7;Q59HB3 E1A689 E1A689 APOB Apolipoprotein B-100;Apolipoprotein B-48 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.3041 2 618.304384 1234.59421 NaN NaN NaN 0.040568 2.5084E-05 NaN NaN NaN NaN 56.91 0.49731 56.91 56.654 57.151 3.8147E-06 0 0 0 0.011061 1 28083 57.785 45.559 1 NaN NaN 0 1362700 1362700 0 9057 1123 3424 3514 14231 14231 ENFALECSPAFQVSDDEHEK 20 1 0 Unmodified _ENFALECSPAFQVSDDEHEK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 787.6808 3 784.674345 2351.00121 70188.27 0.88653 0.00069564 -0.12792 -0.00010038 0.75861 0.00059526 785.342697887262 787.345832578814 96.706 0.60084 96.706 96.401 97.002 0 181 34 8 0 0 0 0.016897 1 54239 20.173 20.173 1 2.1461 1.7021 0 4434100 1322800 3111300 9058 1795 3425 3515 14232 14232 ENFALECSPAFQVSDDEHEK 20 1 0 Unmodified _ENFALECSPAFQVSDDEHEK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.6816 3 784.674345 2351.00121 69251.08 0.45365 0.00035597 -0.44195 -0.00034679 0.011701 9.1817E-06 785.008446587594 787.679939479358 96.575 0.57162 96.575 96.313 96.885 0 170 29 8 0 0 0 0.0023168 2 53304 24.548 24.548 1 2.0246 1.589 0 3817300 1231100 2586200 9059 1795 3425 3515 14233;14234 14233 ENGAFTVLVDNYVK 14 1 0 Unmodified _ENGAFTVLVDNYVK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z355;Q6P0M4;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.9001 2 784.901388 1567.78822 66691.57 1.1787 0.00092513 0.24987 0.00019612 1.4285 0.0011213 785.403940732494 789.409816556508 110.71 0.33523 110.71 110.56 110.9 -7.6294E-06 57 22 6 0 0 0 0.00011593 2 69576 84.289 84.289 1 1.7871 1.8672 0 12147000 3162500 8984700 9060 1561 3426 3516 14235;14236 14236 ENGAFTVLVDNYVK 14 1 0 Unmodified _ENGAFTVLVDNYVK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z355;Q6P0M4;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.9085 2 784.901388 1567.78822 68178.33 1.0668 0.00083734 0.39542 0.00031036 1.4622 0.0011477 785.404732885482 788.907443388459 110.05 0.29302 110.05 109.93 110.22 7.6294E-06 56 16 6 0 0 0 0.0001513 2 70770 91.961 91.961 1 1.4539 1.4576 0 13835000 6382200 7452400 9061 1561 3426 3516 14237;14238 14238 ENGAFTVLVDNYVK 14 1 0 Unmodified _ENGAFTVLVDNYVK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z355;Q6P0M4;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.903 2 784.901388 1567.78822 68937.52 0.90177 0.0007078 0.10775 8.4573E-05 1.0095 0.00079238 784.900392282795 788.906698877593 121.93 0.34384 121.93 121.7 122.04 0 35 14 4 0 0 0 0.03467 2 71738 29.807 23.704 1 0.82444 0.66825 0 2751500 1483700 1267900 9062 1561 3426 3516 14239;14240 14239 ENGFSSPPQIKDEPEDDGYFVPPK 24 2 0 Unmodified _ENGFSSPPQIKDEPEDDGYFVPPK_ 0 0 1 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 903.7634 3 898.08529 2691.23404 64803.36 0.40033 0.00035953 -0.013888 -1.2473E-05 0.38644 0.00034706 898.419285313789 903.762577753089 102.87 0.5332 102.87 102.68 103.21 0 144 35 6 0 0 0 0.059585 1 58490 11.966 11.966 1 0.77255 0.66555 0 5825300 2527500 3297800 9063 1470 3427 3517 14241 14241 ENGITQALR 9 0 1 Unmodified _ENGITQALR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2761 2 501.272355 1000.53016 88454.49 0.54494 0.00027317 -0.18312 -9.1792E-05 0.36183 0.00018137 501.77414529939 506.276206408272 42.719 0.60519 42.719 42.549 43.155 0 195 48 7 0 0 0 0.0011834 2 22804 88.819 39.722 1 1.2741 1.314 0 36885000 16051000 20834000 9064 1820 3428 3518 14242;14243 14243 ENGITQALR 9 0 1 Unmodified _ENGITQALR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.2763 2 501.272355 1000.53016 86439.84 0.12432 6.2317E-05 0.47557 0.00023839 0.59988 0.0003007 501.77469736066 506.2763525259 48.604 1.1445 48.604 48.088 49.232 3.8147E-06 259 90 5 0 0 0 0.0078883 1 23493 61.582 13.925 1 1.6325 1.3749 0 4616100 2571400 2044700 9065 1820 3428 3518 14244 14244 ENGTGNMDEDLLVK 14 1 0 Oxidation (M) _ENGTGNM(ox)DEDLLVK_ ENGTGNM(1)DEDLLVK ENGTGNM(62.41)DEDLLVK 0 1 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.8614 2 775.853777 1549.693 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.97 1 54.97 54.47 55.47 0 0 0 0 0.0011516 1 30914 62.408 49.792 1 9066 1565 3429 3519 14245 14245 1319 ENGTGNMDEDLLVK 14 1 0 Oxidation (M) _ENGTGNM(ox)DEDLLVK_ ENGTGNM(1)DEDLLVK ENGTGNM(53.24)DEDLLVK 0 1 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.8561 2 775.853777 1549.693 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.158 1 55.158 54.658 55.658 0 0 0 0 0.0036765 1 31013 53.237 40.659 1 9067 1565 3429 3519 14246 14246 1319 ENGTGNMDEDLLVK 14 1 0 Oxidation (M) _ENGTGNM(ox)DEDLLVK_ ENGTGNM(1)DEDLLVK ENGTGNM(68.44)DEDLLVK 0 1 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.8629 2 775.853777 1549.693 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.034 1 54.034 53.534 54.534 -3.8147E-06 0 0 0 0.00087077 1 30878 68.44 47.57 1 9068 1565 3429 3519 14247 14247 1319 ENGTGNMDEDLLVK 14 1 0 Oxidation (M) _ENGTGNM(ox)DEDLLVK_ ENGTGNM(1)DEDLLVK ENGTGNM(54.26)DEDLLVK 0 1 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.8542 2 775.853777 1549.693 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.238 1 54.238 53.738 54.738 0 0 0 0 0.0031097 1 30989 54.259 35.587 1 9069 1565 3429 3519 14248 14248 1319 ENGTGNMDEDLLVK 14 1 0 Oxidation (M) _ENGTGNM(ox)DEDLLVK_ ENGTGNM(1)DEDLLVK ENGTGNM(46.8)DEDLLVK 0 1 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.8547 2 775.853777 1549.693 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.279 1 54.279 53.779 54.779 0 0 0 0 0.0072499 1 31014 46.796 27.138 1 9070 1565 3429 3519 14249 14249 1319 ENGVYLIDVK 10 1 0 Unmodified _ENGVYLIDVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.8143 2 575.311146 1148.60774 79884.12 0.62185 0.00035776 0.3727 0.00021442 0.99455 0.00057217 575.311249283862 579.318241013565 82.28 0.35916 82.28 82.153 82.512 0 104 32 4 0 0 0 0.024874 1 50343 44.863 32.507 1 1.2754 1.2758 0 14027000 6537600 7489900 9071 1504 3430 3520 14250 14250 ENILEEFSK 9 1 0 Unmodified _ENILEEFSK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;B4DMD1 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.7803 2 554.779679 1107.5448 83969.51 0.80836 0.00044846 -0.19092 -0.00010592 0.61744 0.00034254 554.779634738767 558.786617856467 92.166 0.98164 92.166 91.825 92.807 0 266 93 4 0 0 0 0.0010883 3 55934 90.15 47.599 1 1.3926 1.364 0 22199000 10427000 11772000 9072 855 3431 3521 14251;14252;14253 14253 ENILEEFSK 9 1 0 Unmodified _ENILEEFSK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;B4DMD1 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.7807 2 554.779679 1107.5448 84291.84 0.73258 0.00040642 -0.13277 -7.3657E-05 0.59981 0.00033276 554.779619932144 558.786703327474 91.276 0.9267 91.276 90.938 91.865 0 227 81 6 0 0 0 0.00033612 3 56391 101.65 50.3 1 1.4254 1.4854 0 24460000 9716300 14744000 9073 855 3431 3521 14254;14255;14256 14255 ENILHVSENVIFTDVNSILR 20 0 1 Unmodified _ENILHVSENVIFTDVNSILR_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.747 3 771.413013 2311.21721 70055.63 0.26673 0.00020576 0.30126 0.0002324 0.56799 0.00043816 771.747583031241 775.083106233807 133.29 0.27309 133.29 133.13 133.4 0 19 7 5 0 0 0 0.022773 1 89505 18.509 10.517 1 1.1236 1.2303 0 32529000 9897700 22631000 9074 1454 3432 3522 14257 14257 ENINDEPVDMSAR 13 0 1 Oxidation (M) _ENINDEPVDM(ox)SAR_ ENINDEPVDM(1)SAR ENINDEPVDM(77.59)SAR 0 1 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.3316 2 753.330469 1504.64639 71523.03 0.50318 0.00037906 0.23501 0.00017704 0.73819 0.0005561 753.330783538472 758.334648413992 30.846 0.60994 30.846 30.508 31.118 -1.9073E-06 133 55 4 0 0 0 5.9423E-05 2 15031 77.593 74.615 1 0.90691 0.95286 0 11644000 6652500 4991700 9075 591 3433 3523 14258;14259 14259 447 ENINDEPVDMSAR 13 0 1 Oxidation (M) _ENINDEPVDM(ox)SAR_ ENINDEPVDM(1)SAR ENINDEPVDM(110.39)SAR 0 1 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.3353 2 753.330469 1504.64639 70967.59 0.34501 0.00025991 0.13841 0.00010427 0.48343 0.00036418 753.330836589059 758.334653994189 30.238 0.62056 30.238 29.945 30.565 0 166 52 4 0 0 0 8.8743E-07 1 14663 110.39 108.23 1 0.86465 0.85254 0 13006000 6582900 6423600 9076 591 3433 3523 14260 14260 447 ENIQTTNYNTALDFHSNSDVTK 22 1 0 Unmodified _ENIQTTNYNTALDFHSNSDVTK_ 0 0 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.7267 3 838.057735 2511.15137 67264.69 0.46199 0.00038717 0.39555 0.00033149 0.85754 0.00071866 838.393031769754 841.063562827802 72.613 0.37278 72.613 72.378 72.75 0 112 25 6 0 0 0 1.6909E-08 2 42511 67.864 67.864 1 0.97023 0.95107 0 20820000 11885000 8934700 9077 1928 3434 3524 14261;14262 14262 ENIQTTNYNTALDFHSNSDVTK 22 1 0 Unmodified _ENIQTTNYNTALDFHSNSDVTK_ 0 0 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.7281 3 838.057735 2511.15137 66651.51 0.3842 0.00032198 0.45016 0.00037726 0.83435 0.00069923 838.392888392917 841.063688358676 83.336 0.39046 83.336 83.124 83.515 0 135 22 9 0 0 0 0.0021243 2 45341 24.153 24.153 1 1.209 0.9688 0 8415500 3502900 4912700 9078 1928 3434 3524 14263;14264 14263 ENIQTTNYNTALDFHSNSDVTK 22 1 0 Unmodified _ENIQTTNYNTALDFHSNSDVTK_ 0 0 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 840.7297 3 838.057735 2511.15137 67387.95 0.69853 0.00058541 -0.39322 -0.00032954 0.30531 0.00025587 838.391746459985 841.063108766415 83.487 0.3666 83.487 83.293 83.66 0 125 19 9 0 0 0 1.2811E-05 2 44646 42.813 42.813 1 1.1449 0.93204 0 7274500 3550800 3723700 9079 1928 3434 3524 14265;14266 14266 ENISNAQALLEYHLSYLQEVEQLR 24 0 1 Unmodified _ENISNAQALLEYHLSYLQEVEQLR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 957.8257 3 954.154039 2859.44029 62062.05 0.66965 0.00063895 -0.42594 -0.00040641 0.24371 0.00023253 954.488419510518 957.824213776916 124.35 0.55582 124.35 124.12 124.67 0 219 37 10 0 0 0 2.9621E-21 3 80694 108.64 108.64 1 1.1049 1.1232 0 14966000 6411500 8554600 9080 1593 3435 3525 14267;14268;14269 14267 ENISNAQALLEYHLSYLQEVEQLR 24 0 1 Unmodified _ENISNAQALLEYHLSYLQEVEQLR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 957.8259 3 954.154039 2859.44029 61925.71 0.72389 0.0006907 0.16413 0.0001566 0.88801 0.0008473 954.488851656393 957.824416780021 123.98 0.62817 123.98 123.61 124.24 -7.6294E-06 265 42 9 0 0 0 2.5293E-56 2 82384 159.73 159.73 1 1.3074 1.3103 0 18241000 7857200 10383000 9081 1593 3435 3525 14270;14271 14271 ENISNAQALLEYHLSYLQEVEQLR 24 0 1 Unmodified _ENISNAQALLEYHLSYLQEVEQLR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 957.8245 3 954.154039 2859.44029 62347.47 0.88341 0.00084291 -0.29576 -0.0002822 0.58765 0.00056071 954.822826866863 957.823883074466 134.42 0.25386 134.42 134.25 134.5 0 44 11 9 0 0 0 0.015464 1 82057 19.737 19.737 1 1.2031 0.99025 0 18005000 8675400 9329800 9082 1593 3435 3525 14272 14272 ENIVEAIIHSPELIR 15 0 1 Unmodified _ENIVEAIIHSPELIR_ 0 0 0 O95373;E9PLB2 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.9854 2 866.983244 1731.95193 65827.3 0.53473 0.00046361 -1.6744 -0.0014517 -1.1397 -0.00098811 867.484855619629 871.987337227431 122.83 0.54423 122.83 122.51 123.05 0 167 39 6 0 0 0 1.0184E-05 3 79445 92.856 66.739 1 1.959 1.9831 0 7665900 1988600 5677400 9083 1424 3436 3526 14273;14274;14275 14273 ENIVEAIIHSPELIR 15 0 1 Unmodified _ENIVEAIIHSPELIR_ 0 0 0 O95373;E9PLB2 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.9893 2 866.983244 1731.95193 66672.02 0.8152 0.00070676 -0.3489 -0.00030249 0.4663 0.00040428 866.983296088025 871.98686234142 122.07 0.49135 122.07 121.85 122.34 0 146 34 6 0 0 0 0.00022386 3 80883 69.716 54.84 1 2.0033 2.0114 0 11197000 3867700 7329600 9084 1424 3436 3526 14276;14277;14278 14276 ENIVEAIIHSPELIR 15 0 1 Unmodified _ENIVEAIIHSPELIR_ 0 0 0 O95373;E9PLB2 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 867.4861 2 866.983244 1731.95193 67836.15 0.87815 0.00076134 0.085662 7.4267E-05 0.96381 0.00083561 867.484768676603 872.488894618411 134.21 0.17465 134.21 134.1 134.28 0 37 9 5 0 0 0 0.0048881 1 80974 37.954 32.47 1 0.91939 0.76279 0 5355300 2721500 2633800 9085 1424 3436 3526 14279 14279 ENLAESSKPTAGGSR 15 1 1 Unmodified _ENLAESSKPTAGGSR_ 0 0 1 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.386 2 752.373526 1502.7325 70932.14 0.58839 0.00044269 0.036506 2.7466E-05 0.6249 0.00047016 752.373457352864 761.384876086521 17.623 0.20277 17.623 17.512 17.714 1.9073E-06 31 7 7 0 0 0 1.8571E-06 2 4729 105.65 89.017 1 1.1824 1.328 0 6451600 3371700 3079900 9086 1581 3437 3527 14280;14281 14280 ENLAESSKPTAGGSR 15 1 1 Unmodified _ENLAESSKPTAGGSR_ 0 0 1 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.9181 3 501.918109 1502.7325 84811.58 0.34412 0.00017272 0.39732 0.00019942 0.74144 0.00037214 501.918238784517 507.925476067842 17.63 0.28891 17.63 17.491 17.78 0 34 10 5 0 0 0 0.0027102 1 4772 24.481 17.115 1 0.92608 1.0502 0 5365600 3073200 2292500 9087 1581 3437 3527 14282 14282 ENLAESSKPTAGGSR 15 1 1 Unmodified _ENLAESSKPTAGGSR_ 0 0 1 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.3736 2 752.373526 1502.7325 69641.04 0.12061 9.0741E-05 0.4046 0.00030441 0.52521 0.00039515 752.373385083891 761.385075543582 17.559 0.22181 17.559 17.459 17.681 0 40 8 8 0 0 0 3.2966E-06 1 4482 100.19 83.555 1 1.1088 1.2266 0 7446500 3721600 3724900 9088 1581 3437 3527 14283 14283 ENLAIESQSK 10 1 0 Unmodified _ENLAIESQSK_ 0 0 0 Q71F23;A8K8D2;Q09GN1;A5D8X7 Q71F23 Q71F23 CENPU;MLF1IP Centromere protein U MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.7889 2 559.788035 1117.56152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.139 1 30.139 29.639 30.639 1.9073E-06 0 0 0 3.6338E-05 1 14690 90.15 31.434 1 9089 1866 3438 3528 14284 14284 ENLAIESQSK 10 1 0 Unmodified _ENLAIESQSK_ 0 0 0 Q71F23;A8K8D2;Q09GN1;A5D8X7 Q71F23 Q71F23 CENPU;MLF1IP Centromere protein U ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.7886 2 559.788035 1117.56152 NaN NaN NaN 2.1833 0.0012222 NaN NaN NaN NaN 29.708 0.19111 29.708 29.57 29.761 0 0 0 0 0.015795 1 14376 57.348 13.541 1 NaN NaN 0 4990000 4990000 0 9090 1866 3438 3528 14285 14285 ENLAIESQSK 10 1 0 Unmodified _ENLAIESQSK_ 0 0 0 Q71F23;A8K8D2;Q09GN1;A5D8X7 Q71F23 Q71F23 CENPU;MLF1IP Centromere protein U MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.7888 2 559.788035 1117.56152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.082 1 34.082 33.582 34.582 0 0 0 0 0.006862 1 14544 61.65 11.043 1 9091 1866 3438 3528 14286 14286 ENLELNGSILSGGYPGSAPLQR 22 0 1 Unmodified _ENLELNGSILSGGYPGSAPLQR_ 0 0 0 A0A024RC67;O43663;G3V3N7 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1137.0845 2 1136.58204 2271.14952 57766.84 0.24878 0.00028276 -0.16388 -0.00018626 0.0849 9.6495E-05 1137.08348192901 1142.0880149265 121.25 0.29446 121.25 121.08 121.38 0 64 12 8 0 0 0 0.0079574 1 72120 24.053 24.053 1 1.1591 0.97429 0 4384600 1997500 2387200 9092 353 3439 3529 14287 14287 ENLELNGSILSGGYPGSAPLQR 22 0 1 Unmodified _ENLELNGSILSGGYPGSAPLQR_ 0 0 0 A0A024RC67;O43663;G3V3N7 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1137.084 2 1136.58204 2271.14952 58766.18 0.2751 0.00031267 0.30808 0.00035015 0.58318 0.00066283 1137.08380957333 1141.58605332235 121.13 0.28267 121.13 120.93 121.21 7.6294E-06 57 12 6 0 0 0 0.024567 1 71087 22.475 17.845 1 1.1221 0.97048 0 4353900 2284500 2069400 9093 353 3439 3529 14288 14288 ENLESWLNYLK 11 1 0 Unmodified _ENLESWLNYLK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.8665 2 704.858992 1407.70343 73952.7 1.0621 0.00074865 0.14849 0.00010466 1.2106 0.00085332 704.858899929057 708.86623695145 123.19 0.68414 123.19 122.91 123.59 0 240 52 7 0 0 0 1.4269E-05 2 79784 107.15 107.15 1 0.687 0.71891 0 12058000 7404800 4652900 9094 125 3440 3530 14289;14290 14289 ENLESWLNYLK 11 1 0 Unmodified _ENLESWLNYLK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.8661 2 704.858992 1407.70343 72653.8 0.9663 0.0006811 0.57173 0.00040299 1.538 0.0010841 704.858910948888 708.865793734279 122.65 0.67294 122.65 122.37 123.04 7.6294E-06 279 52 9 0 0 0 2.3522E-05 2 81315 103.55 103.55 1 0.72918 0.74292 0 17022000 8893800 8127700 9095 125 3440 3530 14291;14292 14292 ENLESWLNYLK 11 1 0 Unmodified _ENLESWLNYLK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.8668 2 704.858992 1407.70343 73088.43 0.68449 0.00048247 0.25309 0.00017839 0.93758 0.00066086 704.859362781689 708.866229512041 134.54 0.22192 134.54 134.44 134.66 0 26 6 8 0 0 0 0.00041003 2 81311 80.688 80.688 1 1.1851 0.97896 0 31541000 15271000 16270000 9096 125 3440 3530 14293;14294 14293 ENLISALEEAK 11 1 0 Unmodified _ENLISALEEAK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8336 2 608.824618 1215.63468 78453.7 0.68139 0.00041485 -0.42792 -0.00026053 0.25347 0.00015432 608.823816625144 612.831867678324 99.978 1.0161 99.978 99.462 100.48 0 422 88 7 0 0 0 0.00024247 1 61199 90.964 60.4 1 1.7152 1.8626 0 46360000 18065000 28295000 9097 1507 3441 3531 14295 14295 ENLISALEEAK 11 1 0 Unmodified _ENLISALEEAK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8336 2 608.824618 1215.63468 NaN NaN NaN -0.69665 -0.00042414 NaN NaN NaN NaN 99.209 0.76783 99.209 98.946 99.714 0 0 0 0 0.0011556 1 62102 85.355 53.42 1 NaN NaN 0 32480000 0 32480000 9098 1507 3441 3531 14296 14296 ENLLEEQGSIALR 13 0 1 Unmodified _ENLLEEQGSIALR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.3915 2 736.391187 1470.76782 NaN NaN NaN 0.66255 0.0004879 NaN NaN NaN NaN 90.913 0.41183 90.913 90.673 91.084 7.6294E-06 0 0 0 0.0026901 1 54994 68.069 41.554 1 NaN NaN 0 11438000 11438000 0 9099 523 3442 3532 14297 14297 ENLLGSIK 8 1 0 Unmodified _ENLLGSIK_ 0 0 0 A4LAA3;P46100;B4DHH8;H0Y3T0;Q5JX93 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 437.2563 2 437.255643 872.496732 93846.52 -0.2025 -8.8544E-05 -0.13185 -5.7654E-05 -0.33435 -0.0001462 437.255526495866 441.262709566885 66.532 0.64587 66.532 66.335 66.981 7.6294E-06 133 49 4 0 0 0 0.013467 2 38361 65.246 16.569 1 0.61904 0.61407 0 19179000 11858000 7320900 9100 672 3443 3533 14298;14299 14298 ENLPQDYAR 9 0 1 Unmodified _ENLPQDYAR_ 0 0 0 Q2NL82 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.2678 2 553.26727 1104.51999 78788.95 0.50038 0.00027685 0.91792 0.00050785 1.4183 0.0007847 553.267213738256 558.272600258629 35.243 0.65167 35.243 34.802 35.453 0 134 59 4 0 0 0 0.0019674 1 17684 78.516 57.996 1 1.1841 1.2277 0 22785000 9707400 13078000 9101 1776 3444 3534 14300 14300 ENLTDLVVDTDTLGESTQPQR 21 0 1 Unmodified _ENLTDLVVDTDTLGESTQPQR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1166.571 2 1166.06916 2330.12376 NaN NaN NaN -0.14509 -0.00016918 NaN NaN NaN NaN 111.27 0.12299 111.27 111.19 111.32 0 0 0 0 0.0077085 1 70013 38.511 26.346 1 NaN NaN 0 6048300 6048300 0 9102 1738 3445 3535 14301 14301 ENLTELSGGQR 11 0 1 Unmodified _ENLTELSGGQR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5;Q13497 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.3063 2 602.301841 1202.58913 77023.55 0.69757 0.00042014 -0.09062 -5.4581E-05 0.60695 0.00036556 602.301714787277 607.305841856686 40.653 0.86315 40.653 40.418 41.281 0 404 73 10 0 0 0 0.000286 2 21209 89.08 65.311 1 0.77957 0.92302 0 387400000 214670000 172720000 9103 69 3446 3536 14302;14303 14303 ENLTELSGGQR 11 0 1 Unmodified _ENLTELSGGQR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5;Q13497 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.3068 2 602.301841 1202.58913 76237.23 0.91307 0.00054994 -0.15876 -9.562E-05 0.75431 0.00045432 602.301718263951 607.3058168452 39.651 0.50349 39.651 39.398 39.902 0 274 42 9 0 0 0 8.8665E-13 2 20963 146.68 107.53 1 0.82872 0.97359 0 890870000 489540000 401330000 9104 69 3446 3536 14304;14305 14305 ENLTELSGGQR 11 0 1 Unmodified _ENLTELSGGQR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5;Q13497 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.3057 2 602.301841 1202.58913 76411.21 0.3237 0.00019497 0.018282 1.1011E-05 0.34198 0.00020598 602.301875291808 607.305855105189 46.628 1.4053 46.628 46.28 47.685 -3.8147E-06 370 99 10 0 0 0 0.00026225 2 22348 90.108 57.909 1 1.6126 1.393 0 96457000 37726000 58731000 9105 69 3446 3536 14306;14307 14306 ENLTELSGGQR 11 0 1 Unmodified _ENLTELSGGQR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5;Q13497 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.3061 2 602.301841 1202.58913 77132.27 0.20386 0.00012279 0.26761 0.00016118 0.47147 0.00028397 602.302036773893 607.305999317764 46.668 1.2152 46.668 46.417 47.633 0 508 85 12 0 0 0 4.2578E-06 3 21908 111.06 79.983 1 1.5701 1.3706 0 105070000 39614000 65454000 9106 69 3446 3536 14308;14309;14310 14309 ENLWLNLTDGSILCGR 16 0 1 Unmodified _ENLWLNLTDGSILCGR_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 936.4721 2 930.967268 1859.91998 NaN NaN NaN -0.042078 -3.9173E-05 NaN NaN NaN NaN 126.42 0.39609 126.42 126.25 126.64 0 0 0 0 3.3515E-06 2 82220 82.543 69.115 1 NaN NaN 0 3219000 0 3219000 9107 613 3447 3537 14311;14312 14312 ENLWLNLTDGSILCGR 16 0 1 Unmodified _ENLWLNLTDGSILCGR_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 935.9695 2 930.967268 1859.91998 NaN NaN NaN -0.62894 -0.00058552 NaN NaN NaN NaN 126.08 0.28927 126.08 125.88 126.17 0 0 0 0 1.9278E-08 1 83986 94.122 79.246 1 NaN NaN 0 5811900 0 5811900 9108 613 3447 3537 14313 14313 ENMEAISPLK 10 1 0 Oxidation (M) _ENM(ox)EAISPLK_ ENM(1)EAISPLK ENM(72.64)EAISPLK 0 1 0 Q6FI97;Q53FS0;O96019;H7C5S0;C9JQT2 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.2941 2 574.286814 1146.55907 NaN NaN NaN 0.38905 0.00022343 NaN NaN NaN NaN 43.321 0.80358 43.321 42.856 43.659 3.8147E-06 0 0 0 0.0013828 1 23355 72.643 59.064 1 NaN NaN 0 31522000 0 31522000 9109 1434 3448 3538 14314 14314 1128 ENMEAISPLK 10 1 0 Oxidation (M) _ENM(ox)EAISPLK_ ENM(1)EAISPLK ENM(43.31)EAISPLK 0 1 0 Q6FI97;Q53FS0;O96019;H7C5S0;C9JQT2 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.2873 2 574.286814 1146.55907 NaN NaN NaN 0.36939 0.00021214 NaN NaN NaN NaN 50.361 0.48217 50.361 50.179 50.661 3.8147E-06 0 0 0 0.0197 1 24660 43.308 36.185 1 NaN NaN 0 1568700 1568700 0 9110 1434 3448 3538 14315 14315 1128 ENMEAISPLK 10 1 0 Oxidation (M) _ENM(ox)EAISPLK_ ENM(1)EAISPLK ENM(51.45)EAISPLK 0 1 0 Q6FI97;Q53FS0;O96019;H7C5S0;C9JQT2 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.287 2 574.286814 1146.55907 80467.52 0.17762 0.00010201 0.79098 0.00045425 0.9686 0.00055625 574.286848650345 578.294780086933 50.632 0.85265 50.632 50.318 51.171 0 194 61 6 0 0 0 0.005737 1 24321 51.445 42.582 1 1.2712 0.99997 0 3274200 1412600 1861600 9111 1434 3448 3538 14316 14316 1128 ENMNLSEAQVQALALSR 17 0 1 Oxidation (M) _ENM(ox)NLSEAQVQALALSR_ ENM(1)NLSEAQVQALALSR ENM(103.85)NLSEAQVQALALSR 0 1 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.9755 2 945.472914 1888.93128 NaN NaN NaN -0.48379 -0.00045741 NaN NaN NaN NaN 90.408 0.34887 90.408 90.297 90.646 0 0 0 0 3.3287E-10 1 54619 103.85 90.425 1 NaN NaN 0 6402300 6402300 0 9112 672 3449 3539 14317 14317 521 ENMNLSEAQVQALALSR 17 0 1 Oxidation (M) _ENM(ox)NLSEAQVQALALSR_ ENM(1)NLSEAQVQALALSR ENM(124.42)NLSEAQVQALALSR 0 1 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 950.4756 2 945.472914 1888.93128 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.388 1 90.388 89.888 90.888 0 0 0 0 5.6047E-19 1 54616 124.42 111.01 1 9113 672 3449 3539 14318 14318 521 ENMNLSEAQVQALALSR 17 0 1 Oxidation (M) _ENM(ox)NLSEAQVQALALSR_ ENM(1)NLSEAQVQALALSR ENM(109.84)NLSEAQVQALALSR 0 1 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.9738 2 945.472914 1888.93128 65252.07 0.61432 0.00058082 -0.2017 -0.00019071 0.41262 0.00039012 945.974177878836 950.476996539643 89.721 0.41249 89.721 89.511 89.923 0 103 33 4 0 0 0 7.8234E-10 4 55448 109.84 101.14 1 0.92755 0.9155 0 14886000 7436500 7449800 9114 672 3449 3539 14319;14320;14321;14322 14321 521 ENMTLQPK 8 1 0 Unmodified _ENMTLQPK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.7441 2 480.744585 959.474617 95752 -0.071214 -3.4236E-05 0.48004 0.00023077 0.40882 0.00019654 480.744259067574 484.751743288043 29.971 0.19067 29.971 29.9 30.091 0 46 17 4 0 0 0 0.0073768 1 14590 83.206 50.736 1 0.46442 0.47167 0 13652000 8127900 5524500 9115 1471;1679 3450 3540 14323 14323 ENMTLQPK 8 1 0 Unmodified _ENMTLQPK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.752 2 480.744585 959.474617 86684.13 0.346 0.00016634 0.13324 6.4053E-05 0.47924 0.00023039 480.744535228127 484.751743147033 33.704 0.31775 33.704 33.55 33.868 0 126 25 7 0 0 0 0.0058564 2 14775 89.142 61.036 1 1.5563 1.2707 0 33225000 13447000 19779000 9116 1471;1679 3450 3540 14324;14325 14325 ENMTLQPK 8 1 0 Unmodified _ENMTLQPK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.7517 2 480.744585 959.474617 86426.6 0.24582 0.00011818 0.18724 9.0016E-05 0.43307 0.00020819 480.744524815857 484.751704646228 33.773 0.30542 33.773 33.632 33.938 0 112 23 6 0 0 0 0.0049843 2 14349 91.9 59.43 1 1.5556 1.2807 0 28616000 10967000 17649000 9117 1471;1679 3450 3540 14326;14327 14327 ENMTLQPK 8 1 0 Oxidation (M) _ENM(ox)TLQPK_ ENM(1)TLQPK ENM(77.67)TLQPK 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.7497 2 488.742042 975.469531 89012.55 0.3713 0.00018147 0.26173 0.00012792 0.63303 0.00030939 488.74179282333 492.749458414725 33.705 0.29513 33.705 33.564 33.859 0 84 23 5 0 0 0 0.0041951 3 14805 77.674 51.072 1 1.4362 1.1452 0 9565900 4082600 5483300 9118 1471;1679 3450 3541 14328;14329;14330 14329 1193 ENMTLQPK 8 1 0 Oxidation (M) _ENM(ox)TLQPK_ ENM(1)TLQPK ENM(48.56)TLQPK 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.7495 2 488.742042 975.469531 NaN NaN NaN 0.8112 0.00039647 NaN NaN NaN NaN 33.758 0.2627 33.758 33.649 33.912 0 0 0 0 0.016666 1 14343 48.561 34.565 1 NaN NaN 0 4973400 0 4973400 9119 1471;1679 3450 3541 14331 14331 1193 ENNQNVYGLDDSEHISSIVDVPPR 24 0 1 Unmodified _ENNQNVYGLDDSEHISSIVDVPPR_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 903.4319 3 899.76321 2696.2678 64812.93 0.299 0.00026903 0.089053 8.0126E-05 0.38806 0.00034916 900.431571887898 903.434445561648 111.25 0.94847 111.25 110.66 111.61 0 155 48 8 0 0 0 0.039359 1 63209 12.08 10.87 1 2.1457 1.835 0 3272200 982300 2289900 9120 1795 3451 3542 14332 14332 ENNYLNQHVNR 11 0 1 Unmodified _ENNYLNQHVNR_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8367 2 700.836914 1399.65927 NaN NaN NaN 0.036951 2.5896E-05 NaN NaN NaN NaN 24.554 0.17425 24.554 24.42 24.594 0 0 0 0 0.0023569 1 10290 75.378 67.453 1 NaN NaN 0 4136600 4136600 0 9121 2014 3452 3543 14333 14333 ENNYLNQHVNR 11 0 1 Unmodified _ENNYLNQHVNR_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8376 2 700.836914 1399.65927 72671.02 0.37238 0.00026098 -0.13368 -9.3691E-05 0.2387 0.00016729 700.837233673273 705.839874325788 24.173 0.29441 24.173 24.014 24.308 0 33 11 5 0 0 0 9.8884E-13 2 10013 146.23 135.4 1 0.39858 0.40196 0 6204200 3884100 2320200 9122 2014 3452 3543 14334;14335 14335 ENNYLNQHVNR 11 0 1 Unmodified _ENNYLNQHVNR_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 700.8375 2 700.836914 1399.65927 72786.38 0.58717 0.00041151 -0.17043 -0.00011944 0.41675 0.00029207 700.836895117402 705.840767845101 27.541 0.27103 27.541 27.373 27.644 0 45 9 7 0 0 0 7.8874E-05 2 10718 98.048 87.291 1 0.48524 0.41294 0 2843500 1867900 975550 9123 2014 3452 3543 14336;14337 14336 ENNYLNQHVNR 11 0 1 Unmodified _ENNYLNQHVNR_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 467.5605 3 467.560368 1399.65927 88633.09 0.25363 0.00011859 0.025784 1.2056E-05 0.27941 0.00013064 467.560384342578 470.896335453454 27.526 0.31541 27.526 27.358 27.673 0 59 11 8 0 0 0 0.0023489 1 10753 40.154 39.156 1 0.55018 0.46734 0 5235200 3353500 1881600 9124 2014 3452 3543 14338 14338 ENNYLNQHVNR 11 0 1 Unmodified _ENNYLNQHVNR_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.5602 3 467.560368 1399.65927 88431.82 -0.052557 -2.4573E-05 -0.040409 -1.8894E-05 -0.092966 -4.3467E-05 467.560222646724 470.896469494158 27.678 0.41845 27.678 27.48 27.898 0 70 16 8 0 0 0 0.0083573 1 10310 33.057 32.727 1 0.54904 0.47271 0 3381700 2228100 1153500 9125 2014 3452 3543 14339 14339 ENNYLNQHVNR 11 0 1 Unmodified _ENNYLNQHVNR_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.8373 2 700.836914 1399.65927 71871.37 0.22261 0.00015601 0.015673 1.0984E-05 0.23828 0.000167 700.837138465129 705.841278789714 27.671 0.33198 27.671 27.48 27.812 0 40 11 5 0 0 0 0.001998 1 10312 63.216 59.062 1 0.54971 0.48299 0 1861600 1140200 721480 9126 2014 3452 3543 14340 14340 ENPGFDFSGAEISGNYTK 18 1 0 Unmodified _ENPGFDFSGAEISGNYTK_ 0 0 0 E5RFP0;Q8WVJ2 E5RFP0 E5RFP0 NUDCD2 NudC domain-containing protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.9448 2 966.934145 1931.85374 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.236 1 93.236 92.736 93.736 0 0 0 0 0.00025257 1 57855 63.185 49.279 1 9127 1211 3453 3544 14341 14341 ENPLLPEEEEQR 12 0 1 Unmodified _ENPLLPEEEEQR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8564 2 741.857177 1481.6998 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.041 1 60.041 59.541 60.541 3.8147E-06 0 0 0 0.0046216 1 34249 64.82 27.476 1 9128 1054 3454 3545 14342 14342 ENPLLPEEEEQR 12 0 1 Unmodified _ENPLLPEEEEQR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.8627 2 741.857177 1481.6998 NaN NaN NaN -0.1168 -8.6647E-05 NaN NaN NaN NaN 58.929 0.29659 58.929 58.799 59.095 0 0 0 0 0.00026372 1 34224 90.827 83.802 1 NaN NaN 0 7596900 0 7596900 9129 1054 3454 3545 14343 14343 ENPLLPEEEEQR 12 0 1 Unmodified _ENPLLPEEEEQR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.8582 2 741.857177 1481.6998 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.016 1 59.016 58.516 59.516 0 0 0 0 0.00022704 1 34331 83.869 52.375 1 9130 1054 3454 3545 14344 14344 ENPLLPEEEEQR 12 0 1 Unmodified _ENPLLPEEEEQR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 746.8627 2 741.857177 1481.6998 72928.36 0.56548 0.00041951 0.22203 0.00016472 0.78751 0.00058422 741.857121525232 746.861708470001 69.486 0.34034 69.486 69.325 69.666 0 78 25 4 0 0 0 0.015583 1 36433 42.788 42.788 1 1.7554 1.4676 0 3575000 1160000 2414900 9131 1054 3454 3545 14345 14345 ENPLLPEEEEQR 12 0 1 Unmodified _ENPLLPEEEEQR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 746.8618 2 741.857177 1481.6998 71822 0.48676 0.00036111 0.31779 0.00023575 0.80455 0.00059686 741.857235409061 746.861543942208 70.071 0.38665 70.071 69.89 70.277 0 83 34 4 0 0 0 0.020076 1 35961 39.625 39.625 1 1.9788 1.6757 0 3031700 1028000 2003700 9132 1054 3454 3545 14346 14346 ENPLPQGSVDYNNQK 15 1 0 Unmodified _ENPLPQGSVDYNNQK_ 0 0 0 A0A024QZE0;Q9H7E2 A0A024QZE0 A0A024QZE0 TDRD3 Tudor domain-containing protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.9145 2 851.90519 1701.79583 NaN NaN NaN 0.09405 8.0122E-05 NaN NaN NaN NaN 48.329 0.2049 48.329 48.231 48.436 0 0 0 0 0.001252 1 26351 66.262 56.83 1 NaN NaN 0 2176600 0 2176600 9133 18 3455 3546 14347 14347 ENPSATLEDLEK 12 1 0 Unmodified _ENPSATLEDLEK_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.3339 2 673.327721 1344.64089 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.956 1 71.956 71.456 72.456 0 0 0 0 0.0063447 1 42046 62.166 42.895 1 9134 231 3456 3547 14348 14348 ENPSATLEDLEK 12 1 0 Unmodified _ENPSATLEDLEK_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.3351 2 673.327721 1344.64089 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.732 1 70.732 70.232 71.232 0 0 0 0 0.05224 1 42287 42.243 21.372 1 9135 231 3456 3547 14349 14349 ENPSATLEDLEKPGVDEEPQHVLLR 25 1 1 Unmodified _ENPSATLEDLEKPGVDEEPQHVLLR_ 0 0 1 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 945.4834 3 939.141799 2814.40357 62325.38 0.7271 0.00068285 -0.61635 -0.00057884 0.11075 0.00010401 939.474696390149 945.483272057019 108.18 0.40795 108.18 107.99 108.4 0 95 20 8 0 0 0 0.042663 2 62094 15.68 15.68 1 0.89308 0.7441 0 6196700 2397500 3799200 9136 231 3457 3548 14350;14351 14351 ENPSATLEDLEKPGVDEEPQHVLLR 25 1 1 Unmodified _ENPSATLEDLEKPGVDEEPQHVLLR_ 0 0 1 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 939.4772 3 939.141799 2814.40357 62698.87 0.62182 0.00058397 -0.55553 -0.00052173 0.066282 6.2249E-05 939.474820483084 945.483423004732 108.14 0.54971 108.14 107.74 108.29 0 85 26 7 0 0 0 0.0014008 1 61208 26.157 26.157 1 0.98495 0.82671 0 6629100 2586800 4042300 9137 231 3457 3548 14352 14352 ENQCVIISGESGAGK 15 1 0 Unmodified _ENQCVIISGESGAGK_ 0 0 0 Q4KMR3;Q12965 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.8706 2 774.869762 1547.72497 71112.84 0.92976 0.00072044 -0.18276 -0.00014161 0.747 0.00057883 774.869748335855 779.378307158915 41.708 0.41001 41.708 41.534 41.944 0 101 33 4 0 0 0 0.00021155 2 22032 75.739 60.595 1 0.88825 0.87553 0 8542500 4599000 3943500 9138 1703 3458 3549 14353;14354 14354 ENQELNAHNQELNNR 15 0 1 Unmodified _ENQELNAHNQELNNR_ 0 0 0 J3KSW8;U6FSN9;Q6WCQ1;B9EGI2;H0Y2S9;Q5ZEZ6;H0Y7E2;Q9Y6X7 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene;M-RIP;KIAA0864 Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.9283 2 911.924977 1821.8354 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.396 1 21.396 20.896 21.896 0 0 0 0 0.0043757 1 7544 53.967 47.863 1 9139 1330 3459 3550 14355 14355 ENQELNAHNQELNNR 15 0 1 Unmodified _ENQELNAHNQELNNR_ 0 0 0 J3KSW8;U6FSN9;Q6WCQ1;B9EGI2;H0Y2S9;Q5ZEZ6;H0Y7E2;Q9Y6X7 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene;M-RIP;KIAA0864 Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.6221 3 608.285743 1821.8354 78105.17 0.38113 0.00023184 0.38561 0.00023456 0.76674 0.0004664 608.286716578708 611.621937442729 24.23 0.28998 24.23 24.071 24.361 0 47 16 5 0 0 0 0.05617 1 7980 24.191 24.191 1 4.889 4.2335 0 1210900 171200 1039700 9140 1330 3459 3550 14356 14356 ENQTAVDVFR 10 0 1 Unmodified _ENQTAVDVFR_ 0 0 0 C9J931;Q6NZ61;A8K005;A0A090N900;Q15382 C9J931 C9J931 RHEB GTP-binding protein Rheb ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.7979 2 589.793652 1177.57275 NaN NaN NaN 0.1792 0.00010569 NaN NaN NaN NaN 59.368 0.62167 59.368 59.005 59.627 0 0 0 0 0.00010339 1 33736 96.331 47.77 1 NaN NaN 0 27884000 0 27884000 9141 459 3460 3551 14357 14357 ENQTAVDVFR 10 0 1 Unmodified _ENQTAVDVFR_ 0 0 0 C9J931;Q6NZ61;A8K005;A0A090N900;Q15382 C9J931 C9J931 RHEB GTP-binding protein Rheb MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.7981 2 589.793652 1177.57275 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.394 1 58.394 57.894 58.894 3.8147E-06 0 0 0 6.3276E-05 1 33946 84.213 52.26 1 9142 459 3460 3551 14358 14358 ENQVLSVR 8 0 1 Unmodified _ENQVLSVR_ 0 0 0 A0A024R7H5;B4E0Z6;Q10589 A0A024R7H5 A0A024R7H5 BST2 Bone marrow stromal antigen 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.7658 2 472.761623 943.508694 NaN NaN NaN -0.056931 -2.6915E-05 NaN NaN NaN NaN 35.359 0.90049 35.359 34.939 35.84 0 0 0 0 0.0048425 1 18137 89.752 52.658 1 NaN NaN 0 10041000 0 10041000 9143 225 3461 3552 14359 14359 ENQWFDVGVIK 11 1 0 Unmodified _ENQWFDVGVIK_ 0 0 0 A6NEM2;P51610;H7C1C4 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8412 2 667.840602 1333.66665 NaN NaN NaN 0.63067 0.00042118 NaN NaN NaN NaN 106.4 0.51855 106.4 106.13 106.65 7.6294E-06 0 0 0 0.012898 1 67670 55.461 42.672 1 NaN NaN 0 3871700 3871700 0 9144 680 3462 3553 14360 14360 ENSERPPVCLR 11 0 2 Unmodified _ENSERPPVCLR_ 0 0 1 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9 A0A024R4W4 A0A024R4W4 BRD1 Bromodomain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 459.5669 3 452.894471 1355.66158 88911.95 -0.18875 -8.5485E-05 -1.1873 -0.00053773 -1.3761 -0.00062321 452.894411409181 459.566825359396 38.313 0.68758 38.313 38.065 38.753 0 188 52 7 0 0 0 0.037013 1 16962 30.55 22.037 1 1.7451 1.5769 0 2930400 962140 1968200 9145 162 3463 3554 14361 14361 ENSETVVTGSLDDLVK 16 1 0 Unmodified _ENSETVVTGSLDDLVK_ 0 0 0 H0YN81;Q9GZS3;H0YMF9;H0YM76;B4E387 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.4281 2 853.428164 1704.84177 65435.9 0.97487 0.00083198 0.38112 0.00032526 1.356 0.0011572 853.429920379428 857.43546089148 102.16 1.0442 102.16 101.57 102.62 0 424 81 7 0 0 0 0.0012683 1 62894 45.915 45.915 1 1.577 1.7382 0 55815000 22338000 33476000 9146 1299 3464 3555 14362 14362 ENSETVVTGSLDDLVK 16 1 0 Unmodified _ENSETVVTGSLDDLVK_ 0 0 0 H0YN81;Q9GZS3;H0YMF9;H0YM76;B4E387 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 853.4293 2 853.428164 1704.84177 66000.03 0.75617 0.00064534 0.75383 0.00064334 1.51 0.0012887 853.429978965301 857.435707747895 101.52 1.2242 101.52 100.94 102.17 0 424 95 7 0 0 0 5.2983E-12 2 64099 114.7 114.7 1 1.5506 1.7464 0 58527000 18883000 39643000 9147 1299 3464 3555 14363;14364 14364 ENSETVVTGSLDDLVK 16 1 0 Unmodified _ENSETVVTGSLDDLVK_ 0 0 0 H0YN81;Q9GZS3;H0YMF9;H0YM76;B4E387 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 857.44 2 853.428164 1704.84177 64738.5 0.74983 0.00063992 0.22251 0.0001899 0.97234 0.00082982 853.427922443863 857.435775287063 114.59 0.53101 114.59 114.4 114.93 0 112 23 7 0 0 0 0.026218 1 65990 25.647 22.326 1 1.4637 1.2085 0 11389000 4315000 7074500 9148 1299 3464 3555 14365 14365 ENSTHFSQPNSTK 13 1 0 Unmodified _ENSTHFSQPNSTK_ 0 0 0 X5DQX7;Q06787;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WPL0;A0A087WXI3;B4DFH8;B4DZ17 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.8467 2 738.839319 1475.66409 71280.49 0.49935 0.00036894 0.020479 1.513E-05 0.51983 0.00038407 738.839305878185 742.846493874617 17.185 0.32341 17.185 17.047 17.371 0 38 8 9 0 0 0 5.9456E-142 2 4362 266.97 266.97 1 1.3094 1.2898 0 24322000 10614000 13708000 9149 1689 3465 3556 14366;14367 14366 ENSTHFSQPNSTK 13 1 0 Unmodified _ENSTHFSQPNSTK_ 0 0 0 X5DQX7;Q06787;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WPL0;A0A087WXI3;B4DFH8;B4DZ17 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.8952 3 492.895305 1475.66409 87096.4 0.074893 3.6914E-05 -0.02328 -1.1474E-05 0.051613 2.544E-05 492.895097764468 495.566605832798 17.157 0.32356 17.157 17.021 17.344 0 41 8 9 0 0 0 0.022252 1 4392 24.415 21.373 1 1.2203 1.2001 0 20005000 8497300 11508000 9150 1689 3465 3556 14368 14368 ENSTHFSQPNSTK 13 1 0 Unmodified _ENSTHFSQPNSTK_ 0 0 0 X5DQX7;Q06787;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WPL0;A0A087WXI3;B4DFH8;B4DZ17 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.847 2 738.839319 1475.66409 72108.16 1.1957 0.00088342 0.87104 0.00064356 2.0667 0.001527 738.839191706106 742.846420108428 17.111 0.48376 17.111 16.8 17.284 0 37 15 6 0 0 0 9.0776E-05 2 4126 93.345 82.194 1 1.0701 1.1325 0 4194600 2023600 2171000 9151 1689 3465 3556 14369;14370 14370 ENSYPWPYGR 10 0 1 Unmodified _ENSYPWPYGR_ 0 0 0 B2RC06;Q96GD4;J3KTD6;J3KRF8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.7889 2 634.78837 1267.56219 76716.87 0.68837 0.00043697 0.11401 7.2372E-05 0.80238 0.00050934 634.788444210155 639.792491920445 71.791 1.1949 71.791 71.063 72.258 0 445 99 6 0 0 0 0.013114 2 41629 49.715 46.737 1 0.95985 0.97366 0 28012000 14258000 13753000 9152 881;1967 3466 3557 14371;14372 14371 ENSYPWPYGR 10 0 1 Unmodified _ENSYPWPYGR_ 0 0 0 B2RC06;Q96GD4;J3KTD6;J3KRF8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.7887 2 634.78837 1267.56219 77720.19 0.60815 0.00038605 -0.16283 -0.00010336 0.44532 0.00028268 634.788265056183 639.792434640737 70.59 1.1145 70.59 69.913 71.028 7.6294E-06 426 90 6 0 0 0 0.0022483 2 41875 69.954 65.655 1 0.91732 0.97831 0 24587000 12970000 11617000 9153 881;1967 3466 3557 14373;14374 14373 ENSYPWPYGR 10 0 1 Unmodified _ENSYPWPYGR_ 0 0 0 B2RC06;Q96GD4;J3KTD6;J3KRF8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.7928 2 634.78837 1267.56219 NaN NaN NaN 0.41308 0.00026222 NaN NaN NaN NaN 81.663 0.94057 81.663 81.4 82.34 0 0 0 0 0.015561 1 43388 57.59 39.77 1 NaN NaN 0 7133500 0 7133500 9154 881;1967 3466 3557 14375 14375 ENTDSVVMQPK 11 1 0 Oxidation (M) _ENTDSVVM(ox)QPK_ ENTDSVVM(1)QPK ENTDSVVM(111.61)QPK 0 1 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.2986 2 632.29791 1262.58127 76259.2 -0.063572 -4.0196E-05 0.30181 0.00019083 0.23823 0.00015064 632.297959251801 636.305406525226 24.47 0.3245 24.47 24.296 24.621 0 49 11 7 0 0 0 1.3796E-06 1 10204 111.61 73.521 1 1.1448 1.1765 0 12948000 5837300 7110300 9155 836;1683 3467 3558 14376 14376 662 ENTDSVVMQPK 11 1 0 Oxidation (M) _ENTDSVVM(ox)QPK_ ENTDSVVM(1)QPK ENTDSVVM(98.03)QPK 0 1 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.2973 2 632.29791 1262.58127 76414.98 0.27657 0.00017487 -0.14914 -9.4302E-05 0.12743 8.0571E-05 632.297807524273 636.30535170709 24.222 0.32642 24.222 24.034 24.36 0 59 12 7 0 0 0 3.8383E-05 2 9943 98.033 71.519 1 1.1973 1.1977 0 14027000 5659500 8367100 9156 836;1683 3467 3558 14377;14378 14378 662 ENTEGEYSGIEHVIVDGVVQSIK 23 1 0 Unmodified _ENTEGEYSGIEHVIVDGVVQSIK_ 0 0 0 H0YMU3;B4DJB4;H0YL72;B4DSY4;Q53GF8;P50213;H0YLI6;B7Z9J8 H0YMU3 H0YMU3 IDH3A Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.0855 3 834.750131 2501.22856 NaN NaN NaN 1.5729 0.0013129 NaN NaN NaN NaN 119.98 0.58055 119.98 119.68 120.26 -7.6294E-06 0 0 0 0.047947 1 77209 22.044 17.594 1 NaN NaN 0 6591700 6591700 0 9157 987 3468 3559 14379 14379 ENTEGEYSGIEHVIVDGVVQSIK 23 1 0 Unmodified _ENTEGEYSGIEHVIVDGVVQSIK_ 0 0 0 H0YMU3;B4DJB4;H0YL72;B4DSY4;Q53GF8;P50213;H0YLI6;B7Z9J8 H0YMU3 H0YMU3 IDH3A Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 835.4186 3 834.750131 2501.22856 65566 0.9389 0.00078375 -0.41155 -0.00034354 0.52735 0.0004402 835.084214007077 837.755786936959 132.31 0.5105 132.31 132.08 132.59 0 117 23 9 0 0 0 0.053274 1 80468 9.3288 9.3288 1 1.1962 0.94901 0 6447500 3124400 3323000 9158 987 3468 3559 14380 14380 ENTEGEYSSLEHESVAGVVESLK 23 1 0 Unmodified _ENTEGEYSSLEHESVAGVVESLK_ 0 0 0 H7C1W2;E9PF84;O15384;G5E9Q7;D3DWV9;E7EQB8;P51553 H7C1W2 H7C1W2 IDH3G;hCG_2004980 Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.0603 3 831.725762 2492.15546 66542.13 0.77077 0.00064107 0.11709 9.7385E-05 0.88786 0.00073845 832.059696846184 834.731426499674 101.58 0.56776 101.58 101.32 101.89 -7.6294E-06 220 45 6 0 0 0 1.9085E-08 1 64013 58.92 58.92 1 1.2464 1.2811 0 17898000 7379000 10519000 9159 1199 3469 3560 14381 14381 ENTEGEYSSLEHESVAGVVESLK 23 1 0 Unmodified _ENTEGEYSSLEHESVAGVVESLK_ 0 0 0 H7C1W2;E9PF84;O15384;G5E9Q7;D3DWV9;E7EQB8;P51553 H7C1W2 H7C1W2 IDH3G;hCG_2004980 Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.4592 3 831.725762 2492.15546 66792.42 0.9081 0.00075529 1.33 0.0011062 2.2381 0.0018615 832.061298135946 834.397967325299 114.66 0.44972 114.66 114.31 114.76 0 107 19 9 0 0 0 0.00040324 1 67008 44.863 44.863 1 0.72817 0.5737 0 5644900 2877600 2767300 9160 1199 3469 3560 14382 14382 ENTFTIENESVK 12 1 0 Unmodified _ENTFTIENESVK_ 0 0 0 Q6IA86 Q6IA86 Q6IA86 ELP2 Elongator complex protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.8499 2 705.840996 1409.66744 70783.23 0.78189 0.00055189 1.2947 0.00091388 2.0766 0.0014658 705.842693719643 710.349857247815 58.252 0.14448 58.252 58.155 58.3 0 27 9 5 0 0 0 0.0004017 1 33832 71.524 60.772 1 1.4271 1.4293 0 13922000 5777800 8144000 9161 1842 3470 3561 14383 14383 ENVAFEQEK 9 1 0 Unmodified _ENVAFEQEK_ 0 0 0 P83111;H0YNN5 P83111 P83111 LACTB Serine beta-lactamase-like protein LACTB, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.2615 2 547.261653 1092.50875 NaN NaN NaN -0.80386 -0.00043992 NaN NaN NaN NaN 29.174 0.219 29.174 29.086 29.305 0 0 0 0 0.0036065 1 14066 78.113 62.962 1 NaN NaN 0 4719400 4719400 0 9162 1671 3471 3562 14384 14384 ENVLIGDGAGFK 12 1 0 Unmodified _ENVLIGDGAGFK_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;A0A0S2Z3A5;B4DJE7;B4DVE0 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.3276 2 610.319502 1218.62445 78277.16 0.29473 0.00017988 0.73436 0.00044819 1.0291 0.00062807 610.319333601795 614.327482349884 77.697 0.75522 77.697 77.312 78.067 0 199 58 6 0 0 0 1.6998E-05 2 45882 104.79 68.102 1 2.7655 2.7091 0 21778000 5866800 15912000 9163 545 3472 3563 14385;14386 14386 ENVLIGDGAGFK 12 1 0 Unmodified _ENVLIGDGAGFK_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;A0A0S2Z3A5;B4DJE7;B4DVE0 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.3268 2 610.319502 1218.62445 77532.83 0.15477 9.4462E-05 0.72815 0.0004444 0.88292 0.00053886 610.319919695849 614.32718482623 76.713 0.80235 76.713 76.219 77.021 0 199 61 5 0 0 0 6.1603E-05 2 46259 98.04 70.925 1 2.6255 2.7026 0 25219000 6687100 18531000 9164 545 3472 3563 14387;14388 14387 ENVLQYCR 8 0 1 Unmodified _ENVLQYCR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2633 2 541.258391 1080.50223 80949.59 0.70301 0.00038051 -0.22235 -0.00012035 0.48066 0.00026016 541.257885981847 546.262526895155 42.491 0.39339 42.491 42.317 42.71 0 125 31 6 0 0 0 0.0019305 1 22601 104.45 87.672 1 1.5837 1.7586 0 70905000 29281000 41624000 9165 1569 3473 3564 14389 14389 ENVLQYCR 8 0 1 Unmodified _ENVLQYCR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.2626 2 541.258391 1080.50223 82468.07 0.63916 0.00034595 -0.09163 -4.9595E-05 0.54753 0.00029635 541.257801068386 546.262717179027 41.856 0.77086 41.856 41.289 42.06 0 186 66 4 0 0 0 0.008243 2 22549 79.469 71.342 1 1.492 1.4936 0 17103000 7623800 9479300 9166 1569 3473 3564 14390;14391 14390 ENVLQYCR 8 0 1 Unmodified _ENVLQYCR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.2629 2 541.258391 1080.50223 82204.97 0.45699 0.00024735 -0.36956 -0.00020003 0.087437 4.7326E-05 541.257857135377 546.262363187039 49.244 0.89685 49.244 48.775 49.672 0 264 72 6 0 0 0 0.0049823 1 24016 91.906 81.492 1 3.3132 2.816 0 9134500 2153400 6981000 9167 1569 3473 3564 14392 14392 ENVLQYCR 8 0 1 Unmodified _ENVLQYCR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.2626 2 541.258391 1080.50223 82952.23 0.24829 0.00013439 -0.28883 -0.00015633 -0.040542 -2.1944E-05 541.257582364956 546.262480646433 49.49 0.97654 49.49 48.974 49.95 0 295 77 7 0 0 0 0.0052559 1 23625 91.041 86.186 1 3.3825 2.813 0 7442700 1657000 5785800 9168 1569 3473 3564 14393 14393 ENVPPGPEVCITHQEGEK 18 1 0 Unmodified _ENVPPGPEVCITHQEGEK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.992 3 673.986195 2018.93675 74026.01 0.49402 0.00033296 0.15007 0.00010114 0.64408 0.0004341 674.320620457505 676.99202672227 52.303 1.1447 52.303 51.741 52.886 -3.8147E-06 393 86 7 0 0 0 9.4856E-06 1 28819 65.808 56.876 1 2.0719 2.2301 0 33287000 10786000 22501000 9169 1010 3474 3565 14394 14394 ENVTVLDK 8 1 0 Unmodified _ENVTVLDK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2577 2 459.250557 916.486562 89503.01 0.74076 0.00034019 -0.24889 -0.0001143 0.49187 0.00022589 459.250049526308 463.257572932246 35.2 0.42595 35.2 34.988 35.414 0 108 39 4 0 0 0 0.03177 2 17854 51.066 26.172 1 2.7851 3.0952 0 50429000 9560600 40868000 9170 1887 3475 3566 14395;14396 14395 ENVYDELR 8 0 1 Unmodified _ENVYDELR_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.2527 2 519.248546 1036.48254 83806.77 0.34785 0.00018062 0.045316 2.353E-05 0.39317 0.00020415 519.248396713356 524.252644160727 54.004 0.98144 54.004 53.509 54.49 0 354 78 6 0 0 0 0.0084049 2 30038 78.77 61.994 1 2.3735 2.7067 0 119660000 29824000 89840000 9171 1391 3476 3567 14397;14398 14397 ENVYDELR 8 0 1 Unmodified _ENVYDELR_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.253 2 519.248546 1036.48254 NaN NaN NaN 0.23769 0.00012342 NaN NaN NaN NaN 52.815 1.1237 52.815 52.189 53.313 -3.8147E-06 0 0 0 1.1643E-13 1 30065 148.38 122.65 1 NaN NaN 0 56800000 0 56800000 9172 1391 3476 3567 14399 14399 ENVYDELR 8 0 1 Unmodified _ENVYDELR_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.2527 2 519.248546 1036.48254 82778.79 0.10914 5.6673E-05 0.27928 0.00014502 0.38842 0.00020169 519.248598898935 524.25273086405 62.426 1.1861 62.426 61.903 63.089 0 373 99 7 0 0 0 0.0070206 1 31982 84.743 66.757 1 5.1033 4.2154 0 19135000 3270200 15865000 9173 1391 3476 3567 14400 14400 ENVYDELR 8 0 1 Unmodified _ENVYDELR_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 524.2524 2 519.248546 1036.48254 83905.7 0.10863 5.6406E-05 0.018715 9.7175E-06 0.12735 6.6124E-05 519.248542157334 524.252570088486 63.066 1.2693 63.066 62.549 63.818 0 361 108 5 0 0 0 0.004999 2 31611 91.853 73.868 1 5.2645 4.3205 0 13724000 2229800 11494000 9174 1391 3476 3567 14401;14402 14401 ENYLEENLLYAPSLR 15 0 1 Unmodified _ENYLEENLLYAPSLR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 912.4639 2 912.462341 1822.91013 NaN NaN NaN 0.4287 0.00039118 NaN NaN NaN NaN 126.97 0.49158 126.97 126.75 127.24 0 0 0 0 0.010196 1 76406 50.897 44.656 1 NaN NaN 0 3504600 3504600 0 9175 122 3477 3568 14403 14403 EPAFEDITLESER 13 0 1 Unmodified _EPAFEDITLESER_ 0 0 0 O75400;B4DPY2;Q4ZG51 O75400 O75400 PRPF40A;FNBP3 Pre-mRNA-processing factor 40 homolog A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.3651 2 768.364835 1534.71512 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.86 1 89.86 89.36 90.36 0 0 0 0 0.017734 1 54252 49.081 39.193 1 9176 1404 3478 3569 14404 14404 EPAFEDITLESER 13 0 1 Unmodified _EPAFEDITLESER_ 0 0 0 O75400;B4DPY2;Q4ZG51 O75400 O75400 PRPF40A;FNBP3 Pre-mRNA-processing factor 40 homolog A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.8666 2 768.364835 1534.71512 NaN NaN NaN -0.17826 -0.00013697 NaN NaN NaN NaN 89.031 0.33977 89.031 88.868 89.207 0 0 0 0 0.006038 2 54882 55.452 40.576 1 NaN NaN 0 9599100 9599100 0 9177 1404 3478 3569 14405;14406 14406 EPAFEDITLESERK 14 1 1 Unmodified _EPAFEDITLESERK_ 0 0 1 O75400;B4DPY2;Q4ZG51 O75400 O75400 PRPF40A;FNBP3 Pre-mRNA-processing factor 40 homolog A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.2775 3 555.277303 1662.81008 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.145 1 72.145 71.645 72.645 0 0 0 0 0.025036 1 43295 39.629 28.359 1 9178 1404 3479 3570 14407 14407 EPAPETADGPYLVIVEQPK 19 1 0 Unmodified _EPAPETADGPYLVIVEQPK_ 0 0 0 Q00653;A0A1P8C958;D3DR86;M0R119 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1031.5367 2 1027.02804 2052.04154 NaN NaN NaN -0.82425 -0.00084653 NaN NaN NaN NaN 105.24 0.40785 105.24 105.01 105.42 7.6294E-06 0 0 0 3.4847E-06 1 65092 71.879 50.321 1 NaN NaN 0 6618100 0 6618100 9179 1674 3480 3571 14408 14408 EPAPETADGPYLVIVEQPK 19 1 0 Unmodified _EPAPETADGPYLVIVEQPK_ 0 0 0 Q00653;A0A1P8C958;D3DR86;M0R119 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1031.0361 2 1027.02804 2052.04154 60032.99 0.56946 0.00058485 -0.20777 -0.00021339 0.36168 0.00037146 1027.02792166618 1031.53565728281 104.56 0.41225 104.56 104.31 104.72 0 72 31 5 0 0 0 2.2119E-05 2 66165 60.628 52.904 1 2.5865 2.6752 0 9742900 3561700 6181200 9180 1674 3480 3571 14409;14410 14409 EPAPETADGPYLVIVEQPK 19 1 0 Unmodified _EPAPETADGPYLVIVEQPK_ 0 0 0 Q00653;A0A1P8C958;D3DR86;M0R119 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1031.5364 2 1027.02804 2052.04154 60403.08 0.54845 0.00056327 -0.1029 -0.00010568 0.44555 0.00045759 1027.02718315341 1031.03492119979 116.52 0.36131 116.52 116.32 116.68 0 72 15 7 0 0 0 0.00038557 1 67508 42.388 37.293 1 2.096 1.6662 0 3116700 900980 2215800 9181 1674 3480 3571 14411 14411 EPAQTEAAASTEPATR 16 0 1 Unmodified _EPAQTEAAASTEPATR_ 0 0 0 F1T0L5;Q8N8A6 F1T0L5 F1T0L5 DDX51 ATP-dependent RNA helicase DDX51 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.8951 2 815.389373 1628.76419 70649.2 0.61645 0.00050264 0.15497 0.00012636 0.77142 0.00062901 815.889967950149 820.895522693177 27.021 0.27213 27.021 26.91 27.183 1.9073E-06 40 13 5 0 0 0 0.0072393 1 10398 35.006 35.006 1 1.7006 1.5113 0 911430 264080 647350 9182 1251 3481 3572 14412 14412 EPAQTEAAASTEPATR 16 0 1 Unmodified _EPAQTEAAASTEPATR_ 0 0 0 F1T0L5;Q8N8A6 F1T0L5 F1T0L5 DDX51 ATP-dependent RNA helicase DDX51 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.3943 2 815.389373 1628.76419 69393.37 0.36866 0.0003006 -0.22906 -0.00018678 0.1396 0.00011383 815.388290820091 820.394063422304 27.305 0.29337 27.305 27.118 27.411 0 39 11 5 0 0 0 0.022645 1 10065 27.409 27.409 1 1.6081 1.4716 0 520930 182760 338160 9183 1251 3481 3572 14413 14413 EPEAAAPAPGTGGDSVCGETHR 22 0 1 Unmodified _EPEAAAPAPGTGGDSVCGETHR_ 0 0 0 Q08379;Q5HYE0;A0A087WYC0 Q08379 Q08379 GOLGA2;DKFZp686K0319 Golgin subfamily A member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.659 3 722.655396 2164.94436 74412.84 1.0594 0.00076557 -0.41759 -0.00030177 0.6418 0.0004638 723.322363131145 726.326176006509 32.109 0.2555 32.109 31.957 32.212 0 88 24 5 0 0 0 2.131E-05 3 15865 38.26 37.817 1 1.4694 1.4931 0 7461200 3091500 4369800 9184 1692 3482 3573 14414;14415;14416 14416 EPEAAAPAPGTGGDSVCGETHR 22 0 1 Unmodified _EPEAAAPAPGTGGDSVCGETHR_ 0 0 0 Q08379;Q5HYE0;A0A087WYC0 Q08379 Q08379 GOLGA2;DKFZp686K0319 Golgin subfamily A member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.9907 3 722.655396 2164.94436 72923.22 0.6168 0.00044573 -0.49988 -0.00036124 0.11692 8.449E-05 722.988989778678 725.991341641017 31.338 0.28849 31.338 31.217 31.506 1.9073E-06 69 24 4 0 0 0 4.0624E-09 3 15479 77.221 72.953 1 0.94115 0.94693 0 10921000 6226900 4694300 9185 1692 3482 3573 14417;14418;14419 14419 EPEGTSHEFK 10 1 0 Unmodified _EPEGTSHEFK_ 0 0 0 Q9Y483;B4DZG1;B4DZ69 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.7648 2 580.76456 1159.51457 NaN NaN NaN NaN NaN NaN NaN NaN NaN 17.17 1 17.17 16.67 17.67 1.9073E-06 0 0 0 0.0075665 1 4355 60.717 41.202 1 9186 2143 3483 3574 14420 14420 EPELEDLTR 9 0 1 Unmodified _EPELEDLTR_ 0 0 0 P49792;D3DX73 P49792 P49792 RANBP2;hCG_1994636 E3 SUMO-protein ligase RanBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.2797 2 551.274761 1100.53497 87353.98 0.29941 0.00016506 0.24281 0.00013386 0.54223 0.00029892 551.275312602424 556.278637105008 65.211 0.68347 65.211 64.906 65.59 -7.6294E-06 117 61 4 0 0 0 0.027097 1 37655 47.198 24.178 1 2.1139 2.1539 0 6945800 2861400 4084400 9187 1588 3484 3575 14421 14421 EPELEDLTR 9 0 1 Unmodified _EPELEDLTR_ 0 0 0 P49792;D3DX73 P49792 P49792 RANBP2;hCG_1994636 E3 SUMO-protein ligase RanBP2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.2785 2 551.274761 1100.53497 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.028 1 64.028 63.528 64.528 0 0 0 0 0.015885 1 37668 57.96 38.323 1 9188 1588 3484 3575 14422 14422 EPELLEPIPYEFMA 14 0 0 Oxidation (M) _EPELLEPIPYEFM(ox)A_ EPELLEPIPYEFM(1)A EPELLEPIPYEFM(55.06)A 0 1 0 Q6IAX2;P46778;Q59GK9 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.9643 2 847.405114 1692.79568 NaN NaN NaN 1.0237 0.00086746 NaN NaN NaN NaN 133.48 0.18973 133.48 133.35 133.54 0 0 0 0 0.0017414 1 87407 55.064 46.06 1 9189 1571 3485 3576 14423 14423 1350 EPELLEPIPYEFMA 14 0 0 Oxidation (M) _EPELLEPIPYEFM(ox)A_ EPELLEPIPYEFM(1)A EPELLEPIPYEFM(128.36)A 0 1 0 Q6IAX2;P46778;Q59GK9 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.9059 2 847.405114 1692.79568 NaN NaN NaN 0.50647 0.00042919 NaN NaN NaN NaN 133.4 0.2542 133.4 133.23 133.48 0 0 0 0 5.3192E-16 1 89599 128.36 114.55 1 9190 1571 3485 3576 14424 14424 1350 EPELMPK 7 1 0 Oxidation (M) _EPELM(ox)PK_ EPELM(1)PK EPELM(60.79)PK 0 1 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.2152 2 430.215129 858.415705 NaN NaN NaN 0.28859 0.00012416 NaN NaN NaN NaN 24.133 0.31894 24.133 23.995 24.314 0 0 0 0 0.014019 1 9939 60.788 43.861 1 NaN NaN 0 19228000 19228000 0 9191 2059 3486 3577 14425 14425 1886 EPEQEPVPAQFQK 13 1 0 Unmodified _EPEQEPVPAQFQK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.8868 2 763.877913 1525.74127 68152.71 0.6608 0.00050477 1.9959 0.0015246 2.6567 0.0020294 763.877575035337 768.390376005317 53.485 0.56168 53.485 53.216 53.778 0 191 42 8 0 0 0 1.6323E-19 3 29944 149.17 126.52 1 0.43145 0.46593 0 42216000 22650000 19566000 9192 1275 3487 3578 14426;14427;14428 14427 EPEQEPVPAQFQK 13 1 0 Unmodified _EPEQEPVPAQFQK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.3898 2 763.877913 1525.74127 67324.79 0.81657 0.00062376 1.3226 0.0010103 2.1392 0.0016341 763.877940543338 767.885149346482 52.45 0.76543 52.45 52.017 52.783 0 271 57 7 0 0 0 0.0076179 2 29881 44.863 26.191 1 0.50785 0.5581 0 42015000 32486000 9529600 9193 1275 3487 3578 14429;14430 14429 EPEQEPVPAQFQK 13 1 0 Unmodified _EPEQEPVPAQFQK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.8783 2 763.877913 1525.74127 68385.88 0.47503 0.00036287 0.52056 0.00039765 0.9956 0.00076051 764.379842922411 767.885235917745 62.119 0.68988 62.119 61.841 62.531 3.8147E-06 325 57 8 0 0 0 0.00015665 2 31916 72.607 65.588 1 0.79825 0.63776 0 9084000 4788200 4295800 9194 1275 3487 3578 14431;14432 14432 EPEQEPVPAQFQK 13 1 0 Unmodified _EPEQEPVPAQFQK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.8774 2 763.877913 1525.74127 67952.36 0.51284 0.00039175 0.18088 0.00013817 0.69373 0.00052992 763.87786463915 767.885074338275 62.769 0.57482 62.769 62.44 63.015 0 240 42 8 0 0 0 0.0026912 1 31613 52.725 38.035 1 0.81153 0.66509 0 8735400 4757000 3978400 9195 1275 3487 3578 14433 14433 EPESFPFVILGNK 13 1 0 Unmodified _EPESFPFVILGNK_ 0 0 0 A0A024RBV5;P51151 A0A024RBV5 A0A024RBV5 RAB9A Ras-related protein Rab-9A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.8892 2 738.890292 1475.76603 NaN NaN NaN -0.65758 -0.00048588 NaN NaN NaN NaN 119.74 0.54535 119.74 119.43 119.97 -7.6294E-06 0 0 0 0.0245 1 77005 45.598 30.026 1 NaN NaN 0 3723300 3723300 0 9196 348 3488 3579 14434 14434 EPESFPFVILGNK 13 1 0 Unmodified _EPESFPFVILGNK_ 0 0 0 A0A024RBV5;P51151 A0A024RBV5 A0A024RBV5 RAB9A Ras-related protein Rab-9A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.8971 2 738.890292 1475.76603 69883.82 0.92406 0.00068278 -0.29835 -0.00022045 0.62571 0.00046233 738.889807884526 742.897412319919 119.2 0.60732 119.2 118.89 119.5 0 167 41 7 0 0 0 0.0002021 2 78447 70.399 58.667 1 2.5185 2.7339 0 22273000 7037300 15236000 9197 348 3488 3579 14435;14436 14435 EPESFPFVILGNK 13 1 0 Unmodified _EPESFPFVILGNK_ 0 0 0 A0A024RBV5;P51151 A0A024RBV5 A0A024RBV5 RAB9A Ras-related protein Rab-9A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.8976 2 738.890292 1475.76603 71611.59 1.0629 0.00078536 -1.4549 -0.001075 -0.39197 -0.00028962 738.890228686192 742.897275195561 131.55 0.51227 131.55 131.26 131.77 0 81 19 7 0 0 0 0.0099676 2 78922 42.21 35.322 1 1.5266 1.2175 0 2402800 1086900 1315900 9198 348 3488 3579 14437;14438 14437 EPFNLFYIEK 10 1 0 Unmodified _EPFNLFYIEK_ 0 0 0 Q9HB00;Q08554 Q9HB00 Q9HB00 DSC1 Desmocollin-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.3336 2 650.334621 1298.65469 NaN NaN NaN -1.3237 -0.00086086 NaN NaN NaN NaN 113.02 0.1633 113.02 112.88 113.04 0 0 0 0 0.052955 1 71485 46.001 24.554 1 NaN NaN 0 2630000 2630000 0 9199 1693 3489 3580 14439 14439 EPFTIAQGK 9 1 0 Unmodified _EPFTIAQGK_ 0 0 0 B4DNW3;P35659;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.7664 2 495.766374 989.518196 84192.41 0.31975 0.00015852 0.090086 4.4661E-05 0.40983 0.00020318 495.766392854874 499.773387653618 47.936 1.1634 47.936 47.463 48.627 0 558 99 8 0 0 0 0.032386 2 26311 45.081 39.602 1 0.63834 0.76059 0 665340000 400930000 264400000 9200 1546;1018 3490 3581 14440;14441 14441 EPFTIAQGK 9 1 0 Unmodified _EPFTIAQGK_ 0 0 0 B4DNW3;P35659;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.7673 2 495.766374 989.518196 84352.96 0.22292 0.00011052 -0.055841 -2.7684E-05 0.16708 8.2834E-05 495.766366061255 499.773327791492 46.895 1.2855 46.895 46.433 47.718 0 535 102 9 0 0 0 0.018672 2 25793 51.854 42.46 1 0.6311 0.74352 0 553780000 334740000 219040000 9201 1546;1018 3490 3581 14442;14443 14442 EPFTIAQGK 9 1 0 Unmodified _EPFTIAQGK_ 0 0 0 B4DNW3;P35659;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.7663 2 495.766374 989.518196 84487.29 0.31625 0.00015679 -0.15092 -7.4822E-05 0.16533 8.1965E-05 495.766420108307 499.773170074627 54.546 1.8692 54.546 54.122 55.991 3.8147E-06 640 126 9 0 0 0 0.042514 2 27524 41.029 33.59 1 0.83974 0.72434 0 101180000 54626000 46551000 9202 1546;1018 3490 3581 14444;14445 14445 EPFTIAQGK 9 1 0 Unmodified _EPFTIAQGK_ 0 0 0 B4DNW3;P35659;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.7665 2 495.766374 989.518196 85383.23 0.031572 1.5653E-05 0.1106 5.4832E-05 0.14217 7.0485E-05 495.766505899302 499.773346382469 54.845 1.7996 54.845 54.395 56.195 -3.8147E-06 672 121 10 0 0 0 0.042514 2 27089 41.029 34.134 1 0.84905 0.72355 0 90111000 47320000 42791000 9203 1546;1018 3490 3581 14446;14447 14447 EPGEIQYLIK 10 1 0 Unmodified _EPGEIQYLIK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.3268 2 595.326796 1188.63904 80086.4 0.84649 0.00050394 0.52771 0.00031416 1.3742 0.0008181 595.326782321057 599.333785030552 85.584 0.68224 85.584 85.341 86.023 7.6294E-06 235 55 6 0 0 0 0.0019093 2 51349 71.501 42.085 1 0.80075 0.7901 0 25016000 14435000 10581000 9204 1366 3491 3582 14448;14449 14448 EPGEIQYLIK 10 1 0 Unmodified _EPGEIQYLIK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.3272 2 595.326796 1188.63904 80239.77 0.65604 0.00039056 0.33716 0.00020072 0.9932 0.00059128 595.326760093007 599.333498691552 84.642 0.66075 84.642 84.308 84.969 0 241 55 6 0 0 0 0.00035656 2 51932 88.948 55.552 1 0.84963 0.86224 0 29748000 14841000 14906000 9205 1366 3491 3582 14450;14451 14451 EPGEIQYLIK 10 1 0 Unmodified _EPGEIQYLIK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.3341 2 595.326796 1188.63904 80907.05 0.56039 0.00033362 0.29297 0.00017441 0.85337 0.00050803 595.326695335662 599.333671590456 98.153 0.48774 98.153 97.863 98.351 0 103 30 5 0 0 0 0.036959 1 55347 40.002 24.851 1 0.92368 0.78129 0 2057500 1101000 956530 9206 1366 3491 3582 14452 14452 EPGIPSLTPQAELPEPAVR 19 0 1 Unmodified _EPGIPSLTPQAELPEPAVR_ 0 0 0 B2RWP5;Q96L73;Q96MN8;Q96DQ7;Q8NB95 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1006.5409 2 1001.0362 2000.05786 61214.68 0.51813 0.00051866 0.16138 0.00016155 0.67951 0.00068021 1001.03666040388 1006.04054294963 121.4 0.37331 121.4 121.19 121.56 0 65 16 7 0 0 0 0.0072614 1 72201 29.355 29.355 1 1.8881 1.6097 0 5568200 2642700 2925600 9207 898 3492 3583 14453 14453 EPGIPSLTPQAELPEPAVR 19 0 1 Unmodified _EPGIPSLTPQAELPEPAVR_ 0 0 0 B2RWP5;Q96L73;Q96MN8;Q96DQ7;Q8NB95 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1006.5406 2 1001.0362 2000.05786 61210.77 0.398 0.00039842 -0.32854 -0.00032888 0.069462 6.9534E-05 1001.53688426164 1006.04009663271 121.2 0.35738 121.2 121.03 121.39 0 63 17 5 0 0 0 0.0058563 1 71171 30.961 30.961 1 1.6533 1.391 0 4805600 1853300 2952300 9208 898 3492 3583 14454 14454 EPGSGSGGGVYWVDSQQK 18 1 0 Unmodified _EPGSGSGGGVYWVDSQQK_ 0 0 0 Q9NQT5;Q9NYS3 Q9NQT5 Q9NQT5 EXOSC3;PNAS-3 Exosome complex component RRP40 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 919.42 2 919.421204 1836.82786 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.359 1 61.359 60.859 61.859 0 0 0 0 0.053087 1 35103 35.657 24.124 1 9209 2061 3493 3584 14455 14455 EPGSGSGGGVYWVDSQQK 18 1 0 Unmodified _EPGSGSGGGVYWVDSQQK_ 0 0 0 Q9NQT5;Q9NYS3 Q9NQT5 Q9NQT5 EXOSC3;PNAS-3 Exosome complex component RRP40 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 923.4307 2 919.421204 1836.82786 64968.48 0.55402 0.00050938 -0.021305 -1.9588E-05 0.53272 0.00048979 919.922317001865 923.428406730627 60.445 0.32536 60.445 60.295 60.62 0 60 19 6 0 0 0 2.0162E-05 2 35336 72.681 66.836 1 0.84699 0.85898 0 12887000 6472400 6414400 9210 2061 3493 3584 14456;14457 14457 EPHMCLVR 8 0 1 Oxidation (M) _EPHM(ox)CLVR_ EPHM(1)CLVR EPHM(47.07)CLVR 0 1 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.2503 2 529.249511 1056.48447 NaN NaN NaN 1.0334 0.00054692 NaN NaN NaN NaN 19.607 0.31857 19.607 19.329 19.647 1.9073E-06 0 0 0 0.017851 1 6103 47.067 35.162 1 NaN NaN 0 3706600 3706600 0 9211 1752 3494 3585 14458 14458 1600 EPHMCLVR 8 0 1 Oxidation (M) _EPHM(ox)CLVR_ EPHM(1)CLVR EPHM(57.56)CLVR 0 1 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.2549 2 529.249511 1056.48447 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.341 1 19.341 18.841 19.841 0 0 0 0 0.018856 1 6032 57.559 41.356 1 9212 1752 3494 3585 14459 14459 1600 EPHMCLVR 8 0 1 Oxidation (M) _EPHM(ox)CLVR_ EPHM(1)CLVR EPHM(81.3)CLVR 0 1 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.254 2 529.249511 1056.48447 82186.38 -0.10383 -5.4951E-05 0.099597 5.2712E-05 -0.0042316 -2.2396E-06 529.249796453623 534.253927275605 19.213 0.28587 19.213 19.135 19.421 0 46 9 8 0 0 0 0.0037883 2 5711 81.297 59.833 1 0.9489 1.0372 0 36149000 18652000 17496000 9213 1752 3494 3585 14460;14461 14460 1600 EPIERPEEK 9 1 1 Unmodified _EPIERPEEK_ 0 0 1 E7EPN9;Q9Y520;B4DM27;B4DQN8 E7EPN9 E7EPN9 PRRC2C Protein PRRC2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.7903 2 563.790578 1125.5666 82260.36 0.61963 0.00034934 -0.60509 -0.00034115 0.01454 8.1977E-06 563.789970001223 572.801396680862 17.548 0.2015 17.548 17.449 17.65 -1.9073E-06 29 8 5 0 0 0 0.010774 1 4698 78.113 11.762 1 1.0093 1.1485 0 4192200 1913500 2278700 9214 1219 3495 3586 14462 14462 EPINSTTPFNSSK 13 1 0 Unmodified _EPINSTTPFNSSK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.3557 2 711.348988 1420.68342 NaN NaN NaN 1.2482 0.00088793 NaN NaN NaN NaN 48.818 0.59703 48.818 48.509 49.106 3.8147E-06 0 0 0 0.005641 2 26812 56.936 41.998 1 NaN NaN 0 42053000 0 42053000 9215 1945 3496 3587 14463;14464 14464 EPINSTTPFNSSK 13 1 0 Unmodified _EPINSTTPFNSSK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.3569 2 711.348988 1420.68342 NaN NaN NaN 2.0271 0.001442 NaN NaN NaN NaN 47.663 0.51783 47.663 47.305 47.823 3.8147E-06 0 0 0 8.3835E-14 1 26467 119.94 85.162 1 NaN NaN 0 46369000 0 46369000 9216 1945 3496 3587 14465 14465 EPINSTTPFNSSK 13 1 0 Unmodified _EPINSTTPFNSSK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.3562 2 711.348988 1420.68342 68274.23 0.70361 0.00050051 0.017664 1.2565E-05 0.72127 0.00051307 711.349201209193 715.355928221131 55.946 0.73091 55.946 55.64 56.37 0 251 47 8 0 0 0 0.0032736 1 28005 50.354 50.354 1 3.661 2.8426 0 14655000 2914600 11740000 9217 1945 3496 3587 14466 14466 EPINSTTPFNSSK 13 1 0 Unmodified _EPINSTTPFNSSK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.3461 2 711.348988 1420.68342 69321.18 0.64767 0.00046072 -0.18857 -0.00013414 0.4591 0.00032658 711.348293403018 715.356078138447 56.425 0.83036 56.425 56.111 56.941 -3.8147E-06 271 58 8 0 0 0 0.00030844 2 27771 65.232 60.933 1 3.0017 2.4116 0 15973000 3738700 12234000 9218 1945 3496 3587 14467;14468 14468 EPLEDGDPEDDRTLDDDELAEYDLDK 26 1 1 Unmodified _EPLEDGDPEDDRTLDDDELAEYDLDK_ 0 0 1 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DJV5;Q86X79;Q05BL3;Q6PKI5;Q6PIN4;F8VZ56 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1008.7686 3 1008.09843 3021.27346 61603.36 0.45796 0.00046167 0.32257 0.00032518 0.78053 0.00078685 1008.43267748516 1014.77470252588 95.151 0.54436 95.151 94.907 95.452 0 263 41 9 0 0 0 3.5725E-13 5 57767 74.206 73.29 1 0.78942 0.91299 0 28732000 15543000 13189000 9219 339 3497 3588 14469;14470;14471;14472;14473 14472 EPLEDGDPEDDRTLDDDELAEYDLDK 26 1 1 Unmodified _EPLEDGDPEDDRTLDDDELAEYDLDK_ 0 0 1 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DJV5;Q86X79;Q05BL3;Q6PKI5;Q6PIN4;F8VZ56 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1008.097 3 1008.09843 3021.27346 61252.99 0.4743 0.00047814 -0.027611 -2.7835E-05 0.44669 0.00045031 1008.43247295412 1014.4404269179 94.575 0.58944 94.575 94.303 94.893 0 279 48 8 0 0 0 2.2001E-09 3 58740 50.055 50.055 1 0.80204 0.92316 0 27144000 14675000 12469000 9220 339 3497 3588 14474;14475;14476 14476 EPLEFHAK 8 1 0 Unmodified _EPLEFHAK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.7541 2 485.753267 969.491981 NaN NaN NaN 1.6893 0.00082056 NaN NaN NaN NaN 29.888 0.37233 29.888 29.65 30.022 -1.9073E-06 0 0 0 0.038104 1 14510 54.611 19.462 1 NaN NaN 0 7435500 7435500 0 9221 836;1683 3498 3589 14477 14477 EPLEFHAK 8 1 0 Unmodified _EPLEFHAK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.7542 2 485.753267 969.491981 NaN NaN NaN 0.33206 0.0001613 NaN NaN NaN NaN 29.217 0.28031 29.217 29.115 29.395 0 0 0 0 0.033405 1 14050 57.177 25.874 1 NaN NaN 0 16319000 16319000 0 9222 836;1683 3498 3589 14478 14478 EPLEFHAK 8 1 0 Unmodified _EPLEFHAK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.7545 2 485.753267 969.491981 85428.6 0.2318 0.0001126 0.57751 0.00028053 0.80931 0.00039312 485.753448238813 489.760384244726 33.462 0.26599 33.462 33.322 33.588 0 71 21 5 0 0 0 0.019774 1 14644 58.917 44.76 1 1.1789 0.94691 0 7921800 3288100 4633700 9223 836;1683 3498 3589 14479 14479 EPLEFHAK 8 1 0 Unmodified _EPLEFHAK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.7537 2 485.753267 969.491981 88554.34 0.17746 8.6203E-05 0.54425 0.00026437 0.72171 0.00035057 485.753377957874 489.760355551065 33.509 0.25146 33.509 33.381 33.632 0 82 20 6 0 0 0 0.012693 2 14184 67.032 49.338 1 1.1819 0.96162 0 7044200 3213900 3830300 9224 836;1683 3498 3589 14480;14481 14481 EPLFGISTGNLITGLAAGAK 20 1 0 Unmodified _EPLFGISTGNLITGLAAGAK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209;Q5R207;Q5R211 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.0454 2 965.53584 1929.05713 63067.46 0.33402 0.00032251 0.20937 0.00020216 0.5434 0.00052467 966.037806869988 969.543143380734 128.58 0.28802 128.58 128.44 128.73 0 99 18 8 0 0 0 1.0014E-12 1 83845 103.14 103.14 1 2.0178 2.0564 0 13244000 4185400 9058700 9225 148 3499 3590 14482 14482 EPLLENLTSEYDLDLFR 17 0 1 Unmodified _EPLLENLTSEYDLDLFR_ 0 0 0 O95251;E7EUP3;B7Z4D9;B3KVJ2;B4DG18 O95251 O95251 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1034.5209 2 1034.01768 2066.0208 58862.5 0.56755 0.00058685 -0.037781 -3.9066E-05 0.52977 0.00054779 1034.51925589618 1039.52224187861 133.13 0.70166 133.13 132.82 133.53 0 76 25 7 0 0 0 9.0325E-13 2 89364 119.69 97.457 1 0.80011 0.86825 0 28011000 16165000 11846000 9226 1422 3500 3591 14483;14484 14483 EPLLTLVK 8 1 0 Unmodified _EPLLTLVK_ 0 0 0 Q59EG8;Q13200;Q9NSM5 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.8018 2 456.791861 911.569169 NaN NaN NaN 1.882 0.00085968 NaN NaN NaN NaN 86.782 0.27962 86.782 86.625 86.905 -7.6294E-06 0 0 0 0.020224 1 53451 65.252 7.9712 1 NaN NaN 0 9143200 0 9143200 9227 1707 3501 3592 14485 14485 EPLLVTNGADNALR 14 0 1 Unmodified _EPLLVTNGADNALR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.9039 2 741.89918 1481.78381 71641.71 0.48219 0.00035774 0.0074098 5.4973E-06 0.4896 0.00036324 741.899122870709 746.903374895898 81.209 0.64722 81.209 80.897 81.545 -7.6294E-06 321 55 7 0 0 0 5.7389E-06 1 48250 131.42 81.999 1 0.88694 0.98154 0 60804000 30102000 30701000 9228 486 3502 3593 14486 14486 EPLLVTNGADNALR 14 0 1 Unmodified _EPLLVTNGADNALR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.9045 2 741.89918 1481.78381 71569.41 0.7391 0.00054834 -0.1529 -0.00011344 0.58619 0.0004349 741.89898277533 746.903328210234 80.206 0.67644 80.206 79.879 80.555 0 321 53 8 0 0 0 1.9348E-09 2 48730 156.14 117.39 1 0.87607 1.0059 0 79160000 42663000 36497000 9229 486 3502 3593 14487;14488 14488 EPLLVTNGADNALR 14 0 1 Unmodified _EPLLVTNGADNALR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 746.9043 2 741.89918 1481.78381 70792.44 0.76075 0.0005644 0.01992 1.4778E-05 0.78067 0.00057918 741.899206982157 746.903240565309 92.811 0.68214 92.811 92.488 93.17 0 215 39 7 0 0 0 0.0011965 2 51657 76.255 57.724 1 1.0866 0.88704 0 15609000 6600400 9009100 9230 486 3502 3593 14489;14490 14490 EPLPPIQQHIWNMLNPPAEVTTK 23 1 0 Unmodified _EPLPPIQQHIWNMLNPPAEVTTK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.4723 3 885.131741 2652.37339 63291.25 0.53021 0.00046931 -0.0064006 -5.6653E-06 0.52381 0.00046364 885.466030179513 888.137761663065 131.29 0.57121 131.29 131 131.57 0 181 26 9 0 0 0 0.038737 2 79680 12.314 9.6649 1 0.36084 0.28805 0 20142000 14736000 5405600 9231 1476 3503 3594 14491;14492 14492 EPLPPIQQHIWNMLNPPAEVTTK 23 1 0 Unmodified _EPLPPIQQHIWNMLNPPAEVTTK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 888.1386 3 885.131741 2652.37339 63803.41 0.56494 0.00050004 0.22405 0.00019832 0.78899 0.00069836 885.466301601296 888.138074037368 131.12 0.59859 131.12 130.79 131.39 1.5259E-05 173 27 9 0 0 0 0.033811 1 78641 13.896 11.247 1 0.32151 0.26313 0 26820000 19321000 7499100 9232 1476 3503 3594 14493 14493 EPLSLINVR 9 0 1 Unmodified _EPLSLINVR_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.8125 2 520.808574 1039.60259 83126.09 0.5789 0.0003015 0.1603 8.3484E-05 0.7392 0.00038498 520.808532904316 525.812696767064 86.806 0.39107 86.806 86.63 87.021 0 131 27 6 0 0 0 0.0088862 2 52236 60.682 48.326 1 1.8204 1.9389 0 43516000 17237000 26279000 9233 1972 3504 3595 14494;14495 14494 EPLSLINVR 9 0 1 Unmodified _EPLSLINVR_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.8126 2 520.808574 1039.60259 84093.48 0.68124 0.0003548 -0.23631 -0.00012307 0.44493 0.00023172 520.808371298659 525.812520345598 85.659 0.45226 85.659 85.496 85.948 7.6294E-06 135 32 7 0 0 0 0.00063538 2 52744 96.492 81.71 1 1.7186 1.9591 0 99932000 29562000 70370000 9234 1972 3504 3595 14496;14497 14497 EPLSLINVR 9 0 1 Unmodified _EPLSLINVR_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.8129 2 520.808574 1039.60259 84751.82 0.36922 0.00019229 0.47604 0.00024793 0.84526 0.00044022 521.310521234088 525.81279311366 99.21 0.37247 99.21 99.043 99.416 0 79 20 6 0 0 0 0.035569 1 56064 43.808 38.498 1 3.0191 2.5417 0 4567300 1140900 3426400 9235 1972 3504 3595 14498 14498 EPLSSETQYSVDTR 14 0 1 Unmodified _EPLSSETQYSVDTR_ 0 0 0 A6PW57;Q99755;B4DY52;A2A3N6 A6PW57 A6PW57 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.384 2 806.378474 1610.74239 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.773 1 50.773 50.273 51.273 0 0 0 0 0.0024419 1 28693 63.091 51.523 1 9236 692 3505 3596 14499 14499 EPLTIQVLTVGNALRPK 17 1 1 Unmodified _EPLTIQVLTVGNALRPK_ 0 0 1 B2RB33;Q8NE26;Q5HYL0;Q9UHI8 B2RB33 B2RB33 ADAMTS1;DKFZp686E01144 A disintegrin and metalloproteinase with thrombospondin motifs 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.0353 3 617.035037 1848.08328 NaN NaN NaN -0.2846 -0.00017561 NaN NaN NaN NaN 112.23 0.4109 112.23 111.97 112.38 0 0 0 0 0.0056099 1 70744 49.559 37.946 1 NaN NaN 0 4326500 4326500 0 9237 877 3506 3597 14500 14500 EPLTIQVLTVGNALRPK 17 1 1 Unmodified _EPLTIQVLTVGNALRPK_ 0 0 1 B2RB33;Q8NE26;Q5HYL0;Q9UHI8 B2RB33 B2RB33 ADAMTS1;DKFZp686E01144 A disintegrin and metalloproteinase with thrombospondin motifs 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 623.3778 3 617.035037 1848.08328 78587.21 0.75637 0.00046671 -0.3263 -0.00020134 0.43007 0.00026537 617.369127018122 623.042308426869 123.08 0.32495 123.08 122.91 123.23 -7.6294E-06 67 15 8 0 0 0 0.0090748 2 73544 25.558 25.558 1 0.75601 0.64837 0 2730900 1325200 1405700 9238 877 3506 3597 14501;14502 14502 EPLTQAVGLSTQAEGTR 17 0 1 Unmodified _EPLTQAVGLSTQAEGTR_ 0 0 0 Q5SRE5 Q5SRE5 Q5SRE5 NUP188 Nucleoporin NUP188 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.4549 2 879.455047 1756.89554 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.742 1 76.742 76.242 77.242 -7.6294E-06 0 0 0 0.049719 1 45276 37.613 23.456 1 9239 1816 3507 3598 14503 14503 EPLVATNLPGR 11 0 1 Unmodified _EPLVATNLPGR_ 0 0 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.835 2 583.830037 1165.64552 78558.48 0.45864 0.00026777 0.25603 0.00014948 0.71467 0.00041725 583.829997665985 588.834164242728 68.365 0.48898 68.365 68.123 68.612 0 134 42 4 0 0 0 0.00041899 2 39638 79.986 67.196 1 1.2728 1.3057 0 14369000 5894100 8474500 9240 1562 3508 3599 14504;14505 14505 EPLVATNLPGR 11 0 1 Unmodified _EPLVATNLPGR_ 0 0 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.8346 2 583.830037 1165.64552 79803.41 0.68567 0.00040032 0.70521 0.00041172 1.3909 0.00081204 583.830026622263 588.834033010371 67.227 0.54681 67.227 66.891 67.438 0 163 45 6 0 0 0 0.0001254 2 39787 96.034 71.879 1 1.2078 1.2385 0 21057000 9881300 11175000 9241 1562 3508 3599 14506;14507 14506 EPLYVGVDDDK 11 1 0 Unmodified _EPLYVGVDDDK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.3082 2 625.300975 1248.5874 NaN NaN NaN -0.069474 -4.3442E-05 NaN NaN NaN NaN 60.126 0.68906 60.126 59.699 60.389 3.8147E-06 0 0 0 0.024652 1 34332 51.762 37.268 1 NaN NaN 0 91950000 0 91950000 9242 303 3509 3600 14508 14508 EPLYVGVDDDK 11 1 0 Unmodified _EPLYVGVDDDK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.3011 2 625.300975 1248.5874 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.08 1 60.08 59.58 60.58 0 0 0 0 0.00069551 1 34270 72.434 50.584 1 9243 303 3509 3600 14509 14509 EPLYVGVDDDK 11 1 0 Unmodified _EPLYVGVDDDK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.3013 2 625.300975 1248.5874 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.938 1 58.938 58.438 59.438 0 0 0 0 0.00053622 1 34282 74.944 50.021 1 9244 303 3509 3600 14510 14510 EPLYVGVDDDK 11 1 0 Unmodified _EPLYVGVDDDK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.3002 2 625.300975 1248.5874 76431.09 0.40237 0.0002516 0.091256 5.7062E-05 0.49362 0.00030866 625.300997498621 629.308146450806 69.394 0.56875 69.394 69.078 69.647 0 267 39 10 0 0 0 0.02351 1 36233 42.21 37.427 1 1.5673 1.3133 0 51704000 21915000 29789000 9245 303 3509 3600 14511 14511 EPLYVGVDDDK 11 1 0 Unmodified _EPLYVGVDDDK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 629.3081 2 625.300975 1248.5874 76607.53 0.46537 0.000291 -0.021865 -1.3672E-05 0.44351 0.00027732 625.300983275122 629.308070041426 69.918 0.64838 69.918 69.617 70.266 0 282 53 9 0 0 0 0.0045381 1 35829 57.836 46.685 1 1.4924 1.2472 0 43723000 17326000 26398000 9246 303 3509 3600 14512 14512 EPMIGVNQELAYFYPELFR 19 0 1 Oxidation (M) _EPM(ox)IGVNQELAYFYPELFR_ EPM(1)IGVNQELAYFYPELFR EPM(67.96)IGVNQELAYFYPELFR 0 1 0 CON__P02662 CON__P02662 CON__P02662 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1166.568 2 1166.56955 2331.12456 NaN NaN NaN -0.47551 -0.00055472 NaN NaN NaN NaN 133.19 0.18701 133.19 133.08 133.26 1.5259E-05 0 0 0 1.582E-06 1 89412 67.964 56.524 1 NaN NaN 0 8434400 8434400 0 + 9247 1151 3510 3601 14513 14513 859 EPNPPIDEVISTPGVVAR 18 0 1 Unmodified _EPNPPIDEVISTPGVVAR_ 0 0 0 Q5BKZ2;P52294;C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4 Q5BKZ2 Q5BKZ2 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.0032 2 945.501997 1888.98944 63111.42 0.61562 0.00058207 -0.061757 -5.8392E-05 0.55386 0.00052367 946.002964637266 950.505484313581 105.4 0.68158 105.4 105.08 105.77 0 243 52 7 0 0 0 7.2332E-06 2 65247 82.069 82.069 1 1.0771 1.114 0 23425000 11252000 12173000 9248 1600 3511 3602 14514;14515 14515 EPNPPIDEVISTPGVVAR 18 0 1 Unmodified _EPNPPIDEVISTPGVVAR_ 0 0 0 Q5BKZ2;P52294;C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4 Q5BKZ2 Q5BKZ2 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 950.5063 2 945.501997 1888.98944 62685.04 0.76728 0.00072546 -0.032399 -3.0633E-05 0.73488 0.00069483 946.003661250233 950.505826193506 104.73 0.55219 104.73 104.49 105.04 0 212 43 6 0 0 0 5.0808E-05 2 66330 57.804 44.4 1 1.0646 1.1554 0 28049000 14243000 13807000 9249 1600 3511 3602 14516;14517 14516 EPNPPIDEVISTPGVVAR 18 0 1 Unmodified _EPNPPIDEVISTPGVVAR_ 0 0 0 Q5BKZ2;P52294;C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4 Q5BKZ2 Q5BKZ2 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 945.5018 2 945.501997 1888.98944 63197.22 0.37011 0.00034994 0.75716 0.0007159 1.1273 0.0010658 946.003202251223 951.009366841843 116.73 0.51787 116.73 116.48 117 7.6294E-06 101 20 7 0 0 0 0.00028802 1 68584 46.964 46.964 1 1.0877 0.93566 0 7613600 3431500 4182100 9250 1600 3511 3602 14518 14518 EPNSENVDISSGGGVTGWK 19 1 0 Unmodified _EPNSENVDISSGGGVTGWK_ 0 0 0 P61026;Q53T70 P61026 P61026 RAB10 Ras-related protein Rab-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 971.4571 2 966.950326 1931.8861 63249.52 -0.13866 -0.00013408 0.4847 0.00046868 0.34604 0.0003346 967.452076573855 970.958209236747 74.661 0.41109 74.661 74.458 74.869 0 85 35 5 0 0 0 0.0046809 2 43840 50.102 44.382 1 1.2455 1.2945 0 12456000 5200400 7255600 9251 1627 3512 3603 14519;14520 14520 EPNSENVDISSGGGVTGWK 19 1 0 Unmodified _EPNSENVDISSGGGVTGWK_ 0 0 0 P61026;Q53T70 P61026 P61026 RAB10 Ras-related protein Rab-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 971.4587 2 966.950326 1931.8861 62548.88 0.12018 0.00011621 0.45064 0.00043575 0.57082 0.00055196 966.951007385488 970.957938480441 73.757 0.42272 73.757 73.488 73.91 0 94 35 4 0 0 0 0.00032277 3 44265 61.409 61.409 1 1.5908 1.605 0 7903200 3789100 4114100 9252 1627 3512 3603 14521;14522;14523 14522 EPPEDEEEEDGREK 14 1 1 Unmodified _EPPEDEEEEDGREK_ 0 0 1 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.2357 3 563.235832 1686.68567 82884.37 0.2177 0.00012262 -0.026355 -1.4844E-05 0.19135 0.00010777 563.235826731681 569.243431969761 15.2 0.49651 15.2 15.084 15.58 0 35 26 5 0 0 0 9.2612E-05 1 2981 69.258 69.258 1 0.60697 0.67325 0 7886500 5308100 2578500 9253 1887 3513 3604 14524 14524 EPPGLIFNK 9 1 0 Unmodified _EPPGLIFNK_ 0 0 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.7846 2 507.784567 1013.55458 85872.55 0.33124 0.0001682 -0.18826 -9.5597E-05 0.14298 7.2603E-05 507.784553958948 511.791587234215 72.715 0.63439 72.715 72.44 73.074 0 178 46 6 0 0 0 0.00076604 2 42541 94.662 94.662 1 0.77672 0.86271 0 59818000 32678000 27140000 9254 918 3514 3605 14525;14526 14525 EPPGLIFNK 9 1 0 Unmodified _EPPGLIFNK_ 0 0 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.7844 2 507.784567 1013.55458 87013.22 0.023751 1.2061E-05 0.38421 0.0001951 0.40796 0.00020716 507.784699246202 511.791780358994 71.366 0.47385 71.366 71.183 71.657 0 148 35 7 0 0 0 0.00027271 2 42716 103.91 98.418 1 0.7924 0.88916 0 77069000 42726000 34342000 9255 918 3514 3605 14527;14528 14528 EPPGLIFNK 9 1 0 Unmodified _EPPGLIFNK_ 0 0 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.7847 2 507.784567 1013.55458 83366.43 0.34702 0.00017621 -0.17001 -8.633E-05 0.177 8.988E-05 507.784554905331 511.791643727239 82.662 0.87927 82.662 82.281 83.16 0 233 53 6 0 0 0 0.044415 1 44887 40.268 37.917 1 1.1402 0.89832 0 5825900 2874400 2951500 9256 918 3514 3605 14529 14529 EPPGSTAGLPQEPK 14 1 0 Unmodified _EPPGSTAGLPQEPK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.861 2 704.359356 1406.70416 NaN NaN NaN -1.0105 -0.00071179 NaN NaN NaN NaN 44.652 0.59106 44.652 44.312 44.903 0 0 0 0 0.0015088 1 24026 70.488 35.264 1 NaN NaN 0 5234000 5234000 0 9257 2002 3515 3606 14530 14530 EPPGSTAGLPQEPK 14 1 0 Unmodified _EPPGSTAGLPQEPK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.3677 2 704.359356 1406.70416 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.459 1 44.459 43.959 44.959 3.8147E-06 0 0 0 0.0027994 1 23885 59.57 32.598 1 9258 2002 3515 3606 14531 14531 EPPGSTAGLPQEPK 14 1 0 Unmodified _EPPGSTAGLPQEPK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.3598 2 704.359356 1406.70416 73755.47 1.3427 0.00094572 0.14033 9.884E-05 1.483 0.0010446 704.358092112341 708.869060133674 43.689 0.63428 43.689 43.33 43.964 0 220 49 7 0 0 0 8.8545E-05 2 23808 87.184 37.689 1 1.3716 1.3929 0 29927000 11561000 18366000 9259 2002 3515 3606 14532;14533 14533 EPPGSTAGLPQEPK 14 1 0 Unmodified _EPPGSTAGLPQEPK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.3602 2 704.359356 1406.70416 NaN NaN NaN -0.19671 -0.00013856 NaN NaN NaN NaN 51.75 0.71871 51.75 51.329 52.047 0 0 0 0 0.0019487 1 25492 67.385 44.744 1 NaN NaN 0 1432500 1432500 0 9260 2002 3515 3606 14534 14534 EPPGSTAGLPQEPK 14 1 0 Unmodified _EPPGSTAGLPQEPK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.8612 2 704.359356 1406.70416 NaN NaN NaN -0.37411 -0.00026351 NaN NaN NaN NaN 52.223 0.74492 52.223 51.857 52.602 0 0 0 0 0.0015088 1 25196 70.488 31.921 1 NaN NaN 0 1336300 1336300 0 9261 2002 3515 3606 14535 14535 EPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVR 34 0 1 Unmodified _EPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVR_ 0 0 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1185.9515 3 1182.28271 3543.82629 55796.77 0.03695 4.3686E-05 0.0985 0.00011646 0.13545 0.00016014 1182.95129775229 1185.95320356537 106.52 0.69707 106.52 106.08 106.78 0 258 38 10 0 0 0 0.009824 3 60733 19.375 19.375 1 1.424 1.1943 0 10067000 5113600 4953500 9262 1861 3516 3607 14536;14537;14538 14537 EPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVR 34 0 1 Unmodified _EPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVR_ 0 0 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1182.95 3 1182.28271 3543.82629 56341 0.20569 0.00024318 -0.017501 -2.0691E-05 0.18819 0.00022249 1182.95131908119 1186.28766266569 106.36 0.74518 106.36 105.94 106.69 0 258 45 10 0 0 0 0.0068236 3 59940 20.92 20.92 1 1.2417 1.0311 0 7689100 3842000 3847100 9263 1861 3516 3607 14539;14540;14541 14540 EPPQGAHFLSR 11 0 1 Unmodified _EPPQGAHFLSR_ 0 0 0 B4DM58;B0YJ76;A0A024RAQ3;P00374 B4DM58 B4DM58 DHFR;DYR Dihydrofolate reductase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.8217 2 619.817461 1237.62037 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.163 1 34.163 33.663 34.663 0 0 0 0 0.005587 1 17257 64.374 40.945 1 9264 311 3517 3608 14542 14542 EPPTDVTPTFLTTGVLSTLR 20 0 1 Unmodified _EPPTDVTPTFLTTGVLSTLR_ 0 0 0 B4DUT7;A0A140VJK6;P49915 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1078.5839 2 1073.07553 2144.1365 59854.14 0.40956 0.00043949 -0.18354 -0.00019695 0.22602 0.00024254 1073.576863714 1078.07880443011 130.39 0.73151 130.39 129.88 130.61 0 217 44 7 0 0 0 3.7927E-06 2 84783 60.401 60.401 1 2.4135 2.5221 0 10665000 4034100 6630600 9265 604 3518 3609 14543;14544 14544 EPPTDVTPTFLTTGVLSTLR 20 0 1 Unmodified _EPPTDVTPTFLTTGVLSTLR_ 0 0 0 B4DUT7;A0A140VJK6;P49915 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1073.5743 2 1073.07553 2144.1365 60263.95 0.33975 0.00036458 -0.087612 -9.4014E-05 0.25214 0.00027057 1073.57722127406 1078.58109170965 129.94 0.6566 129.94 129.58 130.24 0 237 45 7 0 0 0 0.00012943 2 86725 42.095 40.457 1 2.3546 2.3683 0 10983000 3820400 7162400 9266 604 3518 3609 14545;14546 14546 EPQGIIACCNPVPPLVR 17 0 1 Unmodified _EPQGIIACCNPVPPLVR_ 0 0 0 Q01780;B4DKG8 Q01780 Q01780 EXOSC10 Exosome component 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.4946 2 960.495138 1918.97572 NaN NaN NaN -0.45408 -0.00043614 NaN NaN NaN NaN 103.69 0.44456 103.69 103.45 103.89 7.6294E-06 0 0 0 0.0016274 1 63910 57.019 48.274 1 NaN NaN 0 5454200 5454200 0 9267 1676 3519 3610 14547 14547 EPQGIIACCNPVPPLVR 17 0 1 Unmodified _EPQGIIACCNPVPPLVR_ 0 0 0 Q01780;B4DKG8 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 965.4984 2 960.495138 1918.97572 62374.33 0.53695 0.00051574 -0.64448 -0.00061902 -0.10753 -0.00010328 960.495262575079 965.499176303556 115.4 0.48253 115.4 115.14 115.62 7.6294E-06 142 22 8 0 0 0 0.00081079 2 67536 45.257 45.257 1 1.0631 0.91192 0 8448800 4207000 4241800 9268 1676 3519 3610 14548;14549 14549 EPQGIIACCNPVPPLVR 17 0 1 Unmodified _EPQGIIACCNPVPPLVR_ 0 0 0 Q01780;B4DKG8 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 960.9957 2 960.495138 1918.97572 62015.23 0.27683 0.0002659 -0.40709 -0.00039101 -0.13025 -0.00012511 960.995362131204 965.499335507993 115.2 0.53072 115.2 114.96 115.5 0 141 25 8 0 0 0 0.0011948 2 66489 42.556 42.556 1 1.0513 0.87192 0 7791200 3774700 4016500 9269 1676 3519 3610 14550;14551 14551 EPSEVPTPK 9 1 0 Unmodified _EPSEVPTPK_ 0 0 0 Q5T6U8;Q6IPL9;B4DWA0;A0A024RCT9;P17096 Q5T6U8;B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.2561 2 492.25584 982.497126 84971.8 0.24535 0.00012078 -0.44545 -0.00021928 -0.2001 -9.85E-05 492.255991097454 496.262412954015 28.382 1.3276 28.382 27.89 29.218 0 518 83 11 0 0 0 0.0047844 2 13138 68.383 51.419 1 0.77055 0.93647 0 2389000000 1391800000 997150000 9270 372;1823 3520 3611 14552;14553 14553 EPSEVPTPK 9 1 0 Unmodified _EPSEVPTPK_ 0 0 0 Q5T6U8;Q6IPL9;B4DWA0;A0A024RCT9;P17096 Q5T6U8;B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2558 2 492.25584 982.497126 85354.89 0.053093 2.6135E-05 -0.45055 -0.00022178 -0.39745 -0.00019565 492.256031137354 496.262433828947 27.766 1.038 27.766 27.359 28.397 1.9073E-06 368 55 9 0 0 0 0.00033401 3 12804 101.72 84.223 1 0.73819 0.87414 0 2532400000 1445000000 1087400000 9271 372;1823 3520 3611 14554;14555;14556 14555 EPSEVPTPK 9 1 0 Unmodified _EPSEVPTPK_ 0 0 0 Q5T6U8;Q6IPL9;B4DWA0;A0A024RCT9;P17096 Q5T6U8;B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 991.5669 1 983.504403 982.497126 61130.7 0.066084 6.4994E-05 0.57549 0.000566 0.64158 0.00063099 983.504861627498 991.519034861251 27.662 0.63337 27.662 27.461 28.095 0 191 35 8 0 0 0 0.014039 1 12799 63.48 63.48 1 0.79258 0.92123 0 232740000 119130000 113620000 9272 372;1823 3520 3611 14557 14557 EPSEVPTPK 9 1 0 Unmodified _EPSEVPTPK_ 0 0 0 Q5T6U8;Q6IPL9;B4DWA0;A0A024RCT9;P17096 Q5T6U8;B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.2624 2 492.25584 982.497126 84527.03 0.037062 1.8244E-05 -0.66983 -0.00032973 -0.63277 -0.00031148 492.255979735189 496.262348129255 31.89 1.5531 31.89 31.343 32.896 1.9073E-06 510 82 11 0 0 0 0.0095109 3 13343 60.118 45.336 1 0.37629 0.33248 0 288310000 206710000 81595000 9273 372;1823 3520 3611 14558;14559;14560 14559 EPSEVPTPK 9 1 0 Unmodified _EPSEVPTPK_ 0 0 0 Q5T6U8;Q6IPL9;B4DWA0;A0A024RCT9;P17096 Q5T6U8;B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.2558 2 492.25584 982.497126 85278.55 0.21217 0.00010444 -0.76356 -0.00037587 -0.55139 -0.00027142 492.255833021599 496.262332999181 32.044 1.5918 32.044 31.42 33.012 0 505 81 11 0 0 0 0.0049382 3 13413 67.993 55.636 1 0.39207 0.33878 0 218760000 158350000 60414000 9274 372;1823 3520 3611 14561;14562;14563 14563 EPSGVAGVDGMLGR 14 0 1 Oxidation (M) _EPSGVAGVDGM(ox)LGR_ EPSGVAGVDGM(1)LGR EPSGVAGVDGM(46.35)LGR 0 1 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.8348 2 680.829908 1359.64526 73760.99 0.36746 0.00025018 0.1833 0.00012479 0.55076 0.00037497 680.829880645451 685.834044754009 52.733 0.69944 52.733 52.347 53.046 0 274 51 9 0 0 0 0.0018933 2 29125 46.352 37.169 1 1.2341 1.345 0 51409000 21614000 29795000 9275 1933 3521 3612 14564;14565 14564 1769 EPSGVAGVDGMLGR 14 0 1 Oxidation (M) _EPSGVAGVDGM(ox)LGR_ EPSGVAGVDGM(1)LGR EPSGVAGVDGM(106.67)LGR 0 1 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.834 2 680.829908 1359.64526 74339.29 0.51534 0.00035086 -0.51161 -0.00034832 0.0037317 2.5406E-06 680.829410571831 685.83367548968 51.525 0.69477 51.525 51.139 51.833 -3.8147E-06 273 55 7 0 0 0 9.8786E-07 1 29100 106.67 93.878 1 1.1771 1.2965 0 41123000 20194000 20929000 9276 1933 3521 3612 14566 14566 1769 EPSPPIDEVINTPR 14 0 1 Unmodified _EPSPPIDEVINTPR_ 0 0 0 B4DII5;B4DWX3;O60684;Q5TFJ7;S4R3E5;G1UI19 B4DII5 B4DII5 KPNA6 Importin subunit alpha;Importin subunit alpha-7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.4033 2 782.404295 1562.79404 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.669 1 87.669 87.169 88.169 0 0 0 0 0.0028903 1 52890 58.674 46.461 1 9277 980 3522 3613 14567 14567 EPSPPIDEVINTPR 14 0 1 Unmodified _EPSPPIDEVINTPR_ 0 0 0 B4DII5;B4DWX3;O60684;Q5TFJ7;S4R3E5;G1UI19 B4DII5 B4DII5 KPNA6 Importin subunit alpha;Importin subunit alpha-7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.4057 2 782.404295 1562.79404 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.784 1 86.784 86.284 87.284 7.6294E-06 0 0 0 0.011683 1 53497 50.207 34.942 1 9278 980 3522 3613 14568 14568 EPSVQEATSTSDILK 15 1 0 Unmodified _EPSVQEATSTSDILK_ 0 0 0 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.9051 2 802.904325 1603.7941 68916.43 0.92029 0.00073891 -0.44185 -0.00035476 0.47844 0.00038414 802.904321995438 807.411672269842 73.692 0.45567 73.692 73.452 73.907 0 104 42 5 0 0 0 0.00022093 1 43131 65.179 56.45 1 0.94314 0.95791 0 13662000 7804700 5857300 9279 570 3523 3614 14569 14569 EPSVQEATSTSDILK 15 1 0 Unmodified _EPSVQEATSTSDILK_ 0 0 0 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.9109 2 802.904325 1603.7941 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.541 1 73.541 73.041 74.041 0 0 0 0 9.5158E-46 1 43139 161.48 114.68 1 9280 570 3523 3614 14570 14570 EPSVQEATSTSDILK 15 1 0 Unmodified _EPSVQEATSTSDILK_ 0 0 0 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.9118 2 802.904325 1603.7941 68874 0.62878 0.00050485 0.2462 0.00019768 0.87498 0.00070253 802.904352852645 806.91116002732 72.702 0.48532 72.702 72.428 72.913 0 206 43 8 0 0 0 2.6857E-15 3 43559 131.69 131.69 1 1.0468 1.0935 0 24309000 12117000 12192000 9281 570 3523 3614 14571;14572;14573 14572 EPSVQEATSTSDILK 15 1 0 Unmodified _EPSVQEATSTSDILK_ 0 0 0 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 806.9123 2 802.904325 1603.7941 69607.27 0.52671 0.0004229 0.0014798 1.1882E-06 0.52819 0.00042409 802.904246468318 806.911228154054 84.423 0.53008 84.423 84.191 84.721 0 182 40 7 0 0 0 0.022676 2 46026 30.205 24.599 1 0.55122 0.43409 0 5787400 3365500 2421900 9282 570 3523 3614 14574;14575 14575 EPSVQEATSTSDILK 15 1 0 Unmodified _EPSVQEATSTSDILK_ 0 0 0 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.9134 2 802.904325 1603.7941 69330.91 0.647 0.00051948 0.27527 0.00022101 0.92226 0.00074049 802.904450110346 806.911828641001 84.696 0.53772 84.696 84.388 84.925 7.6294E-06 181 37 7 0 0 0 0.0026551 3 45376 44.299 38.693 1 0.50096 0.41116 0 5184300 3402000 1782300 9283 570 3523 3614 14576;14577;14578 14578 EPTSSEQGGLEGSGSAAGEGK 21 1 0 Unmodified _EPTSSEQGGLEGSGSAAGEGK_ 0 0 0 B4DU88;Q05BV2;B4DNC6;E9PJ81;E9PRQ7;A0A024R598;A0A024R539;Q04323 B4DU88 B4DU88 UBXN1;LOC51035 UBX domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 971.9395 2 967.93233 1933.85011 62039.21 0.58716 0.00056834 -0.010433 -1.0099E-05 0.57673 0.00055824 967.932816667314 971.939114421868 24.368 0.29167 24.368 24.216 24.508 0 38 11 6 0 0 0 1.0589E-21 3 10084 119.45 112.08 1 1.7969 1.8222 0 5951600 1721000 4230500 9284 169 3524 3615 14579;14580;14581 14579 EPTSSEQGGLEGSGSAAGEGK 21 1 0 Unmodified _EPTSSEQGGLEGSGSAAGEGK_ 0 0 0 B4DU88;Q05BV2;B4DNC6;E9PJ81;E9PRQ7;A0A024R598;A0A024R539;Q04323 B4DU88 B4DU88 UBXN1;LOC51035 UBX domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 971.9382 2 967.93233 1933.85011 62699.2 -0.027402 -2.6523E-05 0.066764 6.4623E-05 0.039362 3.81E-05 967.931922815275 972.441048677711 24.1 0.32018 24.1 23.958 24.278 -1.9073E-06 51 12 6 0 0 0 7.2994E-08 2 9841 70.529 67.742 1 2.1924 2.2084 0 7256100 2964300 4291800 9285 169 3524 3615 14582;14583 14582 EPVICTPVSSGFEK 14 1 0 Unmodified _EPVICTPVSSGFEK_ 0 0 0 B7ZLC9;Q8TEQ6 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.8928 2 775.381974 1548.74939 NaN NaN NaN -0.14115 -0.00010944 NaN NaN NaN NaN 81.966 0.43413 81.966 81.73 82.164 0 0 0 0 0.04936 1 48913 38.783 32.192 1 NaN NaN 0 5051200 0 5051200 9286 1114 3525 3616 14584 14584 EPVICTPVSSGFEK 14 1 0 Unmodified _EPVICTPVSSGFEK_ 0 0 0 B7ZLC9;Q8TEQ6 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.8922 2 775.381974 1548.74939 69680.79 0.9394 0.00072839 0.27214 0.00021101 1.2115 0.0009394 775.381058445578 779.389154168238 80.969 0.48029 80.969 80.757 81.238 0 141 40 6 0 0 0 0.0055705 2 49421 43.544 43.544 1 1.1351 1.189 0 10654000 5368300 5285200 9287 1114 3525 3616 14585;14586 14585 EPVTPSALVLMSR 13 0 1 Oxidation (M) _EPVTPSALVLM(ox)SR_ EPVTPSALVLM(1)SR EPVTPSALVLM(63.73)SR 0 1 0 B2RC06;Q96GD4;J3KTD6;J3KRF8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.3864 2 708.381777 1414.749 72533.68 0.48367 0.00034262 0.068284 4.8371E-05 0.55195 0.00039099 708.381757520707 713.386049937306 99.894 0.52565 99.894 99.611 100.14 0 212 49 6 0 0 0 0.00016444 1 55641 63.727 63.727 1 1.4849 1.2311 0 7821500 3381500 4440000 9288 881;1967 3526 3617 14587 14587 693 EPVTPSALVLMSR 13 0 1 Unmodified _EPVTPSALVLMSR_ 0 0 0 B2RC06;Q96GD4;J3KTD6;J3KRF8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.3878 2 700.384319 1398.75409 NaN NaN NaN 0.015696 1.0993E-05 NaN NaN NaN NaN 116.22 0.53548 116.22 115.92 116.45 -7.6294E-06 0 0 0 0.039549 1 67232 41.401 31.62 1 NaN NaN 0 4583000 0 4583000 9289 881;1967 3526 3618 14588 14588 EPYNYFLLLR 10 0 1 Unmodified _EPYNYFLLLR_ 0 0 0 F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 F2Z2U4 F2Z2U4 TRRAP Transformation/transcription domain-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.3625 2 664.355888 1326.69722 NaN NaN NaN 2.2274 0.0014798 NaN NaN NaN NaN 118.86 0.35997 118.86 118.7 119.06 -7.6294E-06 0 0 0 0.011292 1 76417 61.999 39.259 1 NaN NaN 0 1770900 0 1770900 9290 1253 3527 3619 14589 14589 EPYQILLDGTFCQAALR 17 0 1 Unmodified _EPYQILLDGTFCQAALR_ 0 0 0 Q9BRU9;G3XAM4;E5RGP0;E5RH13;E5RIC4 Q9BRU9 Q9BRU9 UTP23 rRNA-processing protein UTP23 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 998.5053 2 998.00385 1993.99315 60651.5 0.84139 0.00083971 -0.1914 -0.00019102 0.64999 0.00064869 998.004277680281 1003.50896227274 132.5 0.42847 132.5 132.27 132.7 -1.5259E-05 101 17 7 0 0 0 0.0029783 1 79668 36.284 36.284 1 0.94635 0.78939 0 6601000 3466700 3134300 9291 1999 3528 3620 14590 14590 EQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPR 40 0 2 Unmodified _EQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPR_ 0 0 1 B4DIA5;A0A024QZ23;P19532 B4DIA5 B4DIA5 TFE3 Transcription factor E3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 962.0147 4 961.512965 3842.02275 60788.13 0.41797 0.00040188 0.99496 0.00095667 1.4129 0.0013586 961.764551590272 966.768544655261 114.49 0.58931 114.49 114.25 114.84 0 130 25 11 0 0 0 8.5252E-05 3 66886 28.47 28.47 1 1.6562 1.4036 0 8780900 3356100 5424800 9292 9 3529 3621 14591;14592;14593 14592 EQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPR 40 0 2 Unmodified _EQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPR_ 0 0 1 B4DIA5;A0A024QZ23;P19532 B4DIA5 B4DIA5 TFE3 Transcription factor E3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 962.2641 4 961.512965 3842.02275 62403.45 0.23828 0.00022911 0.54338 0.00052247 0.78166 0.00075158 961.764526863986 966.768348421706 114.3 0.39988 114.3 114.1 114.5 0 128 16 11 0 0 0 0.02175 1 65801 10.936 10.936 1 1.8728 1.707 0 7648200 3065500 4582700 9293 9 3529 3621 14594 14594 EQADFALEALAK 12 1 0 Unmodified _EQADFALEALAK_ 0 0 0 Q7Z406;M0QY43;B3KWH4 Q7Z406 Q7Z406 MYH14 Myosin-14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.3453 2 653.337892 1304.66123 NaN NaN NaN 0.14014 9.1562E-05 NaN NaN NaN NaN 94.842 0.97227 94.842 94.38 95.352 0 0 0 0 0.0029977 3 57388 66.595 0 1 NaN NaN 0 62376000 0 62376000 9294 1875 3530 3622 14595;14596;14597 14595 EQADFALEALAK 12 1 0 Unmodified _EQADFALEALAK_ 0 0 0 Q7Z406;M0QY43;B3KWH4 Q7Z406 Q7Z406 MYH14 Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3381 2 653.337892 1304.66123 74936.94 0.84439 0.00055167 0.13282 8.6778E-05 0.97721 0.00063845 653.337778930891 657.345029392668 94.019 1.093 94.019 93.424 94.517 7.6294E-06 519 95 8 0 0 0 2.4328E-05 3 58213 101.38 0 1 1.7007 1.9605 0 183620000 69807000 113810000 9295 1875 3530 3622 14598;14599;14600 14599 EQADFALEALAK 12 1 0 Unmodified _EQADFALEALAK_ 0 0 0 Q7Z406;M0QY43;B3KWH4 Q7Z406 Q7Z406 MYH14 Myosin-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.338 2 653.337892 1304.66123 74567.6 0.86743 0.00056672 0.196 0.00012806 1.0634 0.00069478 653.337860949254 657.345070338595 108.04 0.84293 108.04 107.66 108.51 0 249 43 8 0 0 0 0.0020652 2 61924 59.542 0 1 2.943 2.3917 0 28656000 7404300 21252000 9296 1875 3530 3622 14601;14602 14602 EQADFALEALAK 12 1 0 Unmodified _EQADFALEALAK_ 0 0 0 Q7Z406;M0QY43;B3KWH4 Q7Z406 Q7Z406 MYH14 Myosin-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.3456 2 653.337892 1304.66123 74916.74 0.65336 0.00042687 0.1567 0.00010238 0.81006 0.00052924 653.337817065341 657.345062452426 107.95 0.82486 107.95 107.55 108.37 -7.6294E-06 215 40 8 0 0 0 0.0020652 2 60877 59.542 0 1 2.788 2.2785 0 26450000 6333300 20116000 9297 1875 3530 3622 14603;14604 14603 EQAELTGLR 9 0 1 Unmodified _EQAELTGLR_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7769 2 508.772188 1015.52982 83816.92 0.5911 0.00030074 -0.16501 -8.3955E-05 0.42609 0.00021678 508.772073795205 513.776127283737 43.012 0.45307 43.012 42.843 43.296 0 142 34 6 0 0 0 2.059E-06 2 22900 135.83 76.849 1 1.9685 2.1926 0 81161000 27541000 53620000 9298 1972 3531 3623 14605;14606 14605 EQAELTGLR 9 0 1 Unmodified _EQAELTGLR_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.7765 2 508.772188 1015.52982 83236.41 0.46206 0.00023508 0.048651 2.4752E-05 0.51071 0.00025984 508.772126507214 513.776189133381 42.217 0.999 42.217 41.71 42.709 0 306 87 5 0 0 0 0.0055856 2 22543 66.351 28.191 1 1.6918 1.9093 0 47030000 14127000 32903000 9299 1972 3531 3623 14607;14608 14607 EQAELTGLR 9 0 1 Unmodified _EQAELTGLR_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.7767 2 508.772188 1015.52982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.867 1 49.867 49.367 50.367 0 0 0 0 0.014558 1 23853 59.245 35.817 1 9300 1972 3531 3623 14609 14609 EQALSTLQLEHTSTQALVSELLPAK 25 1 0 Unmodified _EQALSTLQLEHTSTQALVSELLPAK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.4902 3 903.155268 2706.44398 64104.7 0.94997 0.00085797 0.23078 0.00020843 1.1808 0.0010664 903.489983717086 906.160943488304 121.27 0.73279 121.27 121.06 121.8 -7.6294E-06 269 47 10 0 0 0 3.5211E-16 3 78406 87.802 87.802 1 0.74856 0.8071 0 41418000 22305000 19113000 9301 186;1747 3532 3624 14610;14611;14612 14611 EQALSTLQLEHTSTQALVSELLPAK 25 1 0 Unmodified _EQALSTLQLEHTSTQALVSELLPAK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.4901 3 903.155268 2706.44398 63943.41 0.86288 0.00077932 0.1825 0.00016483 1.0454 0.00094414 903.823830615188 906.161001020807 120.84 0.70831 120.84 120.6 121.31 0 233 45 8 0 0 0 1.3248E-21 1 79990 109.85 109.85 1 0.79707 0.81417 0 31487000 18822000 12664000 9302 186;1747 3532 3624 14613 14613 EQALSTLQLEHTSTQALVSELLPAK 25 1 0 Unmodified _EQALSTLQLEHTSTQALVSELLPAK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 903.4908 3 903.155268 2706.44398 63424.88 0.83311 0.00075243 0.11095 0.00010021 0.94407 0.00085264 903.490487758869 906.160904592036 134.01 0.55983 134.01 133.77 134.33 1.5259E-05 144 24 12 0 0 0 2.6878E-09 2 81662 50.945 50.945 1 1.601 1.3287 0 45672000 17859000 27813000 9303 186;1747 3532 3624 14614;14615 14615 EQALSTLQLEHTSTQALVSELLPAK 25 1 0 Unmodified _EQALSTLQLEHTSTQALVSELLPAK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 903.4902 3 903.155268 2706.44398 63711.16 0.85032 0.00076797 2.8093 0.0025372 3.6596 0.0033052 903.493436449261 906.16304118389 133.81 0.63699 133.81 133.54 134.17 0 174 30 12 0 0 0 0.002674 1 80569 23.79 23.79 1 1.4578 1.265 0 286250000 117260000 169000000 9304 186;1747 3532 3624 14616 14616 EQDQRPLHPVANPHAEISTK 20 1 1 Unmodified _EQDQRPLHPVANPHAEISTK_ 0 0 1 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.0456 4 567.543637 2266.14544 79319.74 0.55264 0.00031365 0.086074 4.885E-05 0.63872 0.0003625 567.794362717395 572.300114547158 30.838 0.26352 30.838 30.742 31.005 0 90 23 6 0 0 0 0.00163 1 15126 26.915 26.915 1 1.0089 1.1722 0 30010000 13457000 16553000 9305 2079 3533 3625 14617 14617 EQDQRPLHPVANPHAEISTK 20 1 1 Unmodified _EQDQRPLHPVANPHAEISTK_ 0 0 1 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.7946 4 567.543637 2266.14544 80788.96 0.56536 0.00032087 0.41474 0.00023538 0.9801 0.00055625 567.794387372638 572.803150903169 27.953 0.3776 27.953 27.795 28.172 0 122 21 9 0 0 0 1.4995E-05 1 13179 46.578 46.578 1 0.8587 0.98242 0 22136000 13006000 9130300 9306 2079 3533 3625 14618 14618 EQDQRPLHPVANPHAEISTK 20 1 1 Unmodified _EQDQRPLHPVANPHAEISTK_ 0 0 1 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.7342 3 756.38909 2266.14544 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.928 1 27.928 27.428 28.428 1.9073E-06 0 0 0 0.019166 1 13165 35.036 22.555 1 9307 2079 3533 3625 14619 14619 EQDVEVLEPLK 11 1 0 Unmodified _EQDVEVLEPLK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.8438 2 649.84555 1297.67655 79562.05 0.79945 0.00051952 -0.77371 -0.00050279 0.02574 1.6727E-05 649.84482930643 653.85206642924 83.14 0.44983 83.14 82.883 83.333 0 121 39 5 0 0 0 0.00044305 2 49711 78.098 78.098 1 0.64941 0.6751 0 12443000 7556400 4886300 9308 1224 3534 3626 14620;14621 14620 EQEAEPEEQEEDSSSDPR 18 0 1 Unmodified _EQEAEPEEQEEDSSSDPR_ 0 0 0 P55081 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1045.9189 2 1045.91707 2089.8196 61511.77 0.13942 0.00014582 0.20425 0.00021363 0.34367 0.00035945 1045.91802071742 1051.42274393796 20.77 0.3049 20.77 20.608 20.912 1.9073E-06 40 12 5 0 0 0 4.2949E-05 2 7155 60.196 60.196 1 1.6399 1.6865 0 14213000 5085800 9127200 9309 1614 3535 3627 14622;14623 14623 EQEAEPEEQEEDSSSDPR 18 0 1 Unmodified _EQEAEPEEQEEDSSSDPR_ 0 0 0 P55081 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1050.9222 2 1045.91707 2089.8196 60194.16 0.64594 0.0006756 -0.02908 -3.0415E-05 0.61686 0.00064518 1045.91741134081 1051.42251200108 20.689 0.27482 20.689 20.516 20.791 0 40 8 7 0 0 0 1.0344E-29 2 6943 138.42 134.56 1 0.75588 0.76315 0 10195000 6065600 4129900 9310 1614 3535 3627 14624;14625 14624 EQEELEEALEVER 13 0 1 Unmodified _EQEELEEALEVER_ 0 0 0 A0A024R669;A0A024R688;P51948;H0YJ92;H0YJF2 A0A024R669 A0A024R669 MNAT1 CDK-activating kinase assembly factor MAT1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.8813 2 801.878307 1601.74206 NaN NaN NaN 0.27107 0.00021736 NaN NaN NaN NaN 84.123 0.20776 84.123 84.074 84.282 7.6294E-06 0 0 0 0.0024931 1 50408 69.261 53.995 1 NaN NaN 0 2653500 2653500 0 9311 199 3536 3628 14626 14626 EQEELEEALEVER 13 0 1 Unmodified _EQEELEEALEVER_ 0 0 0 A0A024R669;A0A024R688;P51948;H0YJ92;H0YJF2 A0A024R669 A0A024R669 MNAT1 CDK-activating kinase assembly factor MAT1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.8812 2 801.878307 1601.74206 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.161 1 84.161 83.661 84.661 0 0 0 0 0.00041265 1 50413 86.463 74.249 1 9312 199 3536 3628 14627 14627 EQEELEEALEVER 13 0 1 Unmodified _EQEELEEALEVER_ 0 0 0 A0A024R669;A0A024R688;P51948;H0YJ92;H0YJF2 A0A024R669 A0A024R669 MNAT1 CDK-activating kinase assembly factor MAT1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.88 2 801.878307 1601.74206 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.278 1 83.278 82.778 83.778 0 0 0 0 0.002519 1 51020 67.252 58.063 1 9313 199 3536 3628 14628 14628 EQEELEEALEVER 13 0 1 Unmodified _EQEELEEALEVER_ 0 0 0 A0A024R669;A0A024R688;P51948;H0YJ92;H0YJF2 A0A024R669 A0A024R669 MNAT1 CDK-activating kinase assembly factor MAT1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.8789 2 801.878307 1601.74206 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.288 1 83.288 82.788 83.788 0 0 0 0 0.0070215 1 51026 56.225 38.361 1 9314 199 3536 3628 14629 14629 EQEELEEALEVER 13 0 1 Unmodified _EQEELEEALEVER_ 0 0 0 A0A024R669;A0A024R688;P51948;H0YJ92;H0YJF2 A0A024R669 A0A024R669 MNAT1 CDK-activating kinase assembly factor MAT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.8814 2 801.878307 1601.74206 68285.98 0.39005 0.00031278 -0.49401 -0.00039613 -0.10395 -8.3357E-05 802.380406940281 806.880790524569 96.583 0.38195 96.583 96.344 96.726 0 67 20 5 0 0 0 0.020752 1 53423 35.594 35.594 1 1.1894 1.0361 0 2610000 1187300 1422700 9315 199 3536 3628 14630 14630 EQEITAVQAR 10 0 1 Unmodified _EQEITAVQAR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.8016 2 572.801477 1143.5884 NaN NaN NaN 0.077366 4.4315E-05 NaN NaN NaN NaN 31.02 0.27468 31.02 30.892 31.167 0 0 0 0 0.016214 1 15289 56.916 23.538 1 NaN NaN 0 5844500 5844500 0 9316 471 3537 3629 14631 14631 EQELDTLK 8 1 0 Unmodified _EQELDTLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.2601 2 488.253297 974.492041 86289.34 0.45042 0.00021992 -0.18812 -9.1851E-05 0.2623 0.00012807 488.253246558612 492.260133066171 35.874 1.5972 35.874 35.284 36.881 0 776 150 11 0 0 0 0.0013457 3 18042 109.86 30.746 1 0.77251 0.92208 0 746100000 418730000 327370000 9317 1471 3538 3630 14632;14633;14634 14633 EQELDTLK 8 1 0 Unmodified _EQELDTLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2609 2 488.253297 974.492041 86337.7 0.61139 0.00029851 -0.31555 -0.00015407 0.29584 0.00014444 488.253213998179 492.260148148397 35.054 1.0623 35.054 34.54 35.602 0 545 95 11 0 0 0 0.0035323 2 17629 96.492 26.493 1 0.71789 0.8482 0 1298100000 725740000 572400000 9318 1471 3538 3630 14635;14636 14635 EQELDTLK 8 1 0 Unmodified _EQELDTLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.2603 2 488.253297 974.492041 83455.29 0.058825 2.8722E-05 -0.7297 -0.00035628 -0.67087 -0.00032755 488.253399898838 492.259688432737 40.62 2.1968 40.62 40.149 42.346 3.8147E-06 797 173 9 0 0 0 0.0087497 3 18600 77.282 29.68 1 1.3295 1.1569 0 147930000 63712000 84215000 9319 1471 3538 3630 14637;14638;14639 14637 EQELDTLK 8 1 0 Unmodified _EQELDTLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.2599 2 488.253297 974.492041 84410.47 0.017625 8.6056E-06 -0.86247 -0.0004211 -0.84484 -0.0004125 488.253285143707 492.259723052641 40.624 1.8358 40.624 40.142 41.978 0 847 147 9 0 0 0 0.012954 4 18326 66.429 24.498 1 1.3226 1.1314 0 115130000 49875000 65257000 9320 1471 3538 3630 14640;14641;14642;14643 14642 EQELQQTLQQEQSVLDQLR 19 0 1 Unmodified _EQELQQTLQQEQSVLDQLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1162.0906 2 1157.08769 2312.16082 57869.3 0.043364 5.0176E-05 -0.011844 -1.3705E-05 0.03152 3.6471E-05 1157.58883870376 1162.0923677495 114.67 0.32774 114.67 114.5 114.82 -7.6294E-06 87 22 7 0 0 0 3.6232E-08 2 72758 92.939 85.395 1 1.4581 1.5297 0 12076000 4925700 7149900 9321 1754 3539 3631 14644;14645 14644 EQELQQTLQQEQSVLDQLR 19 0 1 Unmodified _EQELQQTLQQEQSVLDQLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1163.0974 2 1157.08769 2312.16082 57601.66 0.24042 0.00027819 0.031913 3.6926E-05 0.27233 0.00031511 1157.58878377377 1162.59331812956 114.23 0.34854 114.23 114.03 114.38 0 103 24 7 0 0 0 1.3118E-05 3 74188 79.633 79.633 1 1.2955 1.2999 0 11237000 4725300 6511300 9322 1754 3539 3631 14646;14647;14648 14646 EQELQQTLQQEQSVLDQLR 19 0 1 Unmodified _EQELQQTLQQEQSVLDQLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1162.593 2 1157.08769 2312.16082 NaN NaN NaN 0.69076 0.00079927 NaN NaN NaN NaN 126.59 0.32812 126.59 126.45 126.78 -7.6294E-06 0 0 0 5.9363E-05 2 76147 66.059 60.905 1 NaN NaN 0 3790900 0 3790900 9323 1754 3539 3631 14649;14650 14649 EQELQQTLQQEQSVLDQLR 19 0 1 Unmodified _EQELQQTLQQEQSVLDQLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1162.5934 2 1157.08769 2312.16082 55791.18 0.17248 0.00019957 1.0151 0.0011746 1.1876 0.0013742 1157.59133361359 1162.59350304976 126.48 0.3932 126.48 126.32 126.72 0 73 15 8 0 0 0 0.0011478 2 75136 36.345 32.102 1 2.1379 1.7274 0 10750000 3713800 7036600 9324 1754 3539 3631 14651;14652 14652 EQELTQAIK 9 1 0 Unmodified _EQELTQAIK_ 0 0 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2876 2 530.287671 1058.56079 83126.43 0.40859 0.00021667 -0.46228 -0.00024514 -0.053683 -2.8467E-05 530.287093768093 534.294589902584 40.263 0.61469 40.263 39.858 40.473 0 149 48 4 0 0 0 0.0024962 1 20993 74.184 37.196 1 0.77762 0.84079 0 35580000 26004000 9576400 9325 2033 3540 3632 14653 14653 EQELTQAIK 9 1 0 Unmodified _EQELTQAIK_ 0 0 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.2949 2 530.287671 1058.56079 84253.88 0.44842 0.00023779 -0.22487 -0.00011925 0.22355 0.00011855 530.287183043778 534.29484133232 39.275 0.64313 39.275 38.919 39.562 0 158 55 5 0 0 0 0.010363 1 20803 59.35 35.921 1 0.81422 0.85249 0 34535000 18534000 16001000 9326 2033 3540 3632 14654 14654 EQELTQAIK 9 1 0 Unmodified _EQELTQAIK_ 0 0 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.2953 2 530.287671 1058.56079 83024.49 0.30701 0.0001628 0.2307 0.00012233 0.53771 0.00028514 530.287734106427 534.294768129855 45.804 0.5379 45.804 45.564 46.102 0 154 41 5 0 0 0 0.048145 1 21918 38.776 18.255 1 1.4373 1.1365 0 4149100 1567500 2581600 9327 2033 3540 3632 14655 14655 EQELTQAIK 9 1 0 Unmodified _EQELTQAIK_ 0 0 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.2877 2 530.287671 1058.56079 85378.8 0.40199 0.00021317 -0.19822 -0.00010512 0.20376 0.00010805 530.287549662674 534.294760661317 45.915 0.65622 45.915 45.623 46.279 -3.8147E-06 148 44 6 0 0 0 0.049868 1 21501 38.086 13.164 1 1.3654 1.0752 0 3874100 1449400 2424700 9328 2033 3540 3632 14656 14656 EQEPTERPLK 10 1 1 Unmodified _EQEPTERPLK_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.8242 2 613.822409 1225.63027 76457.95 -0.0042635 -2.617E-06 0.75627 0.00046422 0.75201 0.0004616 613.823318125356 622.833681152315 20.2 0.35266 20.2 20.04 20.393 0 49 9 8 0 0 0 0.036138 2 5205 58.433 58.433 1 1.2536 1.0697 0 2936100 1341000 1595100 9329 2002 3541 3633 14657;14658 14658 EQEVNILK 8 1 0 Unmodified _EQEVNILK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 490.7786 2 486.771657 971.528761 NaN NaN NaN -0.17187 -8.3662E-05 NaN NaN NaN NaN 55.899 0.69389 55.899 55.606 56.3 3.8147E-06 0 0 0 0.0074104 1 28092 82.671 34.823 1 NaN NaN 0 4069200 0 4069200 9330 81 3542 3634 14659 14659 EQEVNILK 8 1 0 Unmodified _EQEVNILK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 490.7783 2 486.771657 971.528761 86981.67 0.28186 0.0001372 -0.23416 -0.00011398 0.047703 2.3221E-05 486.77164550243 490.778585549559 56.183 0.69397 56.183 55.875 56.569 0 178 47 5 0 0 0 0.012282 1 27597 67.981 26.089 1 3.2276 2.6356 0 4711100 1186600 3524600 9331 81 3542 3634 14660 14660 EQFWEQAK 8 1 0 Unmodified _EQFWEQAK_ 0 0 0 Q16643;D6R9W4;B3KSQ7 Q16643 Q16643 DBN1 Drebrin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.251 2 533.253631 1064.49271 NaN NaN NaN -2.2084 -0.0011777 NaN NaN NaN NaN 48.757 0.32959 48.757 48.598 48.928 0 0 0 0 0.038104 1 27352 54.611 35.829 1 NaN NaN 0 4092600 4092600 0 9332 1773 3543 3635 14661 14661 EQGPYETYEGSPVSK 15 1 0 Unmodified _EQGPYETYEGSPVSK_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8;B4DS95;B4DXD1;E9PL69;B4DXB0 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 836.3823 2 835.880849 1669.74715 68691.47 0.71384 0.00059669 -0.11556 -9.6594E-05 0.59828 0.00050009 836.382192160745 840.389444051546 47.824 0.45529 47.824 47.628 48.084 0 111 40 5 0 0 0 0.00022118 2 25982 72.496 72.496 1 3.3025 3.471 0 30508000 4010400 26497000 9333 1014 3544 3636 14662;14663 14663 EQGPYETYEGSPVSK 15 1 0 Unmodified _EQGPYETYEGSPVSK_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8;B4DS95;B4DXD1;E9PL69;B4DXB0 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 839.9241 2 835.880849 1669.74715 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.608 1 47.608 47.108 48.108 0 0 0 0 0.010988 1 25847 46.88 37.941 1 9334 1014 3544 3636 14664 14664 EQGPYETYEGSPVSK 15 1 0 Unmodified _EQGPYETYEGSPVSK_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8;B4DS95;B4DXD1;E9PL69;B4DXB0 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.8872 2 835.880849 1669.74715 66693.73 0.8532 0.00071317 -0.013033 -1.0894E-05 0.84017 0.00070228 835.880847596179 839.887727398744 46.791 0.54018 46.791 46.471 47.011 -3.8147E-06 170 46 5 0 0 0 0.00011479 2 25725 81.565 77.711 1 3.4038 3.5469 0 19101000 5527500 13573000 9335 1014 3544 3636 14665;14666 14665 EQGQAPITPQQGQALAK 17 1 0 Unmodified _EQGQAPITPQQGQALAK_ 0 0 0 Q6ICQ8;P84095 Q6ICQ8 Q6ICQ8 ARHG;RHOG Rho-related GTP-binding protein RhoG ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.9731 2 882.965582 1763.91661 NaN NaN NaN 0.31997 0.00028252 NaN NaN NaN NaN 49.231 0.38323 49.231 49.044 49.427 0 0 0 0 1.584E-09 1 27623 102.97 82.764 1 NaN NaN 0 12708000 0 12708000 9336 1672 3545 3637 14667 14667 EQGVTFPSGDIQEQLIR 17 0 1 Unmodified _EQGVTFPSGDIQEQLIR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 963.9952 2 958.989254 1915.96396 61989.79 0.47105 0.00045173 0.023946 2.2964E-05 0.495 0.0004747 959.490034377484 963.993562945487 106.13 0.58971 106.13 105.82 106.41 0 169 41 8 0 0 0 1.9508E-07 2 65806 98.337 84.674 1 2.6143 2.6898 0 25002000 6834200 18168000 9337 587 3546 3638 14668;14669 14668 EQGVTFPSGDIQEQLIR 17 0 1 Unmodified _EQGVTFPSGDIQEQLIR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 963.9921 2 958.989254 1915.96396 63457.55 0.45409 0.00043547 -0.19077 -0.00018294 0.26332 0.00025252 959.489744089704 963.993473528301 105.58 0.52397 105.58 105.35 105.87 0 158 35 8 0 0 0 0.0010773 1 66967 43.382 29.72 1 2.8209 3.0609 0 27984000 6802700 21181000 9338 587 3546 3638 14670 14670 EQGYDVIAYLANIGQK 16 1 0 Unmodified _EQGYDVIAYLANIGQK_ 0 0 0 Q5T6L4;P00966;A8KAP9;A0A0S2Z3D8;Q5T6L6;A0A0S2Z3B6;A0A0S2Z3F1;Q5T6L5 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.4666 2 891.457059 1780.89956 NaN NaN NaN 0.3268 0.00029132 NaN NaN NaN NaN 123.94 0.53877 123.94 123.7 124.24 -7.6294E-06 0 0 0 0.0034464 1 80296 56.359 50.387 1 NaN NaN 0 17861000 0 17861000 9339 1437 3547 3639 14671 14671 EQGYDVIAYLANIGQK 16 1 0 Unmodified _EQGYDVIAYLANIGQK_ 0 0 0 Q5T6L4;P00966;A8KAP9;A0A0S2Z3D8;Q5T6L6;A0A0S2Z3B6;A0A0S2Z3F1;Q5T6L5 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.4671 2 891.457059 1780.89956 64640.97 0.6485 0.00057811 0.51022 0.00045484 1.1587 0.0010329 891.457741758436 895.46436038218 123.59 0.56521 123.59 123.34 123.9 -7.6294E-06 183 39 7 0 0 0 0.00016667 2 81958 61.435 50.825 1 4.6821 4.9918 0 23202000 5759200 17443000 9340 1437 3547 3639 14672;14673 14672 EQIDIFEGIK 10 1 0 Unmodified _EQIDIFEGIK_ 0 0 0 A0A024R325;Q96I99;Q3ZCW5;E9PDQ8;B7Z2D5;H0Y852;Q9Y436 A0A024R325 A0A024R325 SUCLG2;DKFZp586M2023 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.3236 2 596.316428 1190.6183 79849.4 0.68497 0.00040846 0.66803 0.00039836 1.353 0.00080682 596.317567769894 600.323730564921 101.12 0.69066 101.12 100.78 101.47 0 173 54 5 0 0 0 0.010142 1 63701 53.756 28.197 1 2.3713 2.3901 0 13383000 4081400 9301600 9341 126 3548 3640 14674 14674 EQIQNQLDHLK 11 1 0 Unmodified _EQIQNQLDHLK_ 0 0 0 P14373;Q59EC6;A0A0G2JIZ4 P14373 P14373 TRIM27 Zinc finger protein RFP ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.3608 2 683.35969 1364.70483 NaN NaN NaN 0.087363 5.97E-05 NaN NaN NaN NaN 45.691 0.21474 45.691 45.574 45.789 0 0 0 0 0.0019878 2 25082 78.934 59.148 1 NaN NaN 0 7935900 7935900 0 9342 1480 3549 3641 14675;14676 14676 EQISDIDDAVR 11 0 1 Unmodified _EQISDIDDAVR_ 0 0 0 Q6IBA2;Q59G24;P53999;Q6E433 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.8107 2 630.806956 1259.59936 75842.29 0.46842 0.00029548 0.00015254 9.6222E-08 0.46857 0.00029558 630.807088785173 635.81107945156 59.101 0.72413 59.101 58.712 59.436 -3.8147E-06 363 57 9 0 0 0 0.00038376 2 33457 82.749 40.952 1 0.73338 0.86108 0 222650000 134890000 87769000 9343 1608 3550 3642 14677;14678 14678 EQISDIDDAVR 11 0 1 Unmodified _EQISDIDDAVR_ 0 0 0 Q6IBA2;Q59G24;P53999;Q6E433 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8067 2 630.806956 1259.59936 75508.63 0.57919 0.00036536 -0.13537 -8.5392E-05 0.44382 0.00027997 630.806803002822 635.811097349744 58.151 0.64116 58.151 57.861 58.502 0 233 48 7 0 0 0 7.8316E-06 2 33642 109.66 38.284 1 0.70117 0.80597 0 199720000 119060000 80652000 9344 1608 3550 3642 14679;14680 14679 EQISDIDDAVR 11 0 1 Unmodified _EQISDIDDAVR_ 0 0 0 Q6IBA2;Q59G24;P53999;Q6E433 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.8076 2 630.806956 1259.59936 75898.98 0.45074 0.00028433 0.21472 0.00013544 0.66545 0.00041977 630.807048649129 635.811061616354 68.604 0.98857 68.604 68.277 69.266 0 370 71 9 0 0 0 0.00093586 2 35738 71.349 40.275 1 0.27922 0.23726 0 34016000 26964000 7051900 9345 1608 3550 3642 14681;14682 14681 EQISDIDDAVR 11 0 1 Unmodified _EQISDIDDAVR_ 0 0 0 Q6IBA2;Q59G24;P53999;Q6E433 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.811 2 630.806956 1259.59936 76588.84 0.584 0.00036839 0.015932 1.005E-05 0.59993 0.00037844 630.806994134124 635.810975379567 69.244 0.97748 69.244 68.873 69.851 0 343 68 8 0 0 0 0.00071156 3 35399 73.067 37.622 1 0.28223 0.24619 0 32677000 25515000 7161900 9346 1608 3550 3642 14683;14684;14685 14685 EQITISQLSLVDLAGSER 18 0 1 Unmodified _EQITISQLSLVDLAGSER_ 0 0 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.4944 2 980.023294 1958.03203 64154.73 0.35435 0.00034727 -0.20337 -0.00019931 0.15097 0.00014796 980.524606472087 985.0271521839 120.4 0.55112 120.4 120.22 120.77 0 162 39 7 0 0 0 2.0844E-15 1 77542 87.083 87.083 1 0.78809 0.79158 0 16008000 7789100 8218400 9347 1312 3551 3643 14686 14686 EQITISQLSLVDLAGSER 18 0 1 Unmodified _EQITISQLSLVDLAGSER_ 0 0 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 980.5251 2 980.023294 1958.03203 63319.17 0.57066 0.00055926 -0.66047 -0.00064728 -0.089817 -8.8022E-05 980.524849427135 985.527736602109 119.97 0.50735 119.97 119.72 120.22 -7.6294E-06 176 37 7 0 0 0 1.3375E-11 1 79118 102.5 102.5 1 0.97196 0.98701 0 20356000 11390000 8966600 9348 1312 3551 3643 14687 14687 EQITISQLSLVDLAGSER 18 0 1 Unmodified _EQITISQLSLVDLAGSER_ 0 0 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 980.0233 2 980.023294 1958.03203 61737.28 0.73632 0.00072161 0.14526 0.00014236 0.88158 0.00086397 980.524601146328 985.02774656264 132.87 0.42554 132.87 132.69 133.12 0 109 20 8 0 0 0 3.014E-05 2 80831 66.246 66.246 1 1.3178 1.1152 0 9429900 4218600 5211300 9349 1312 3551 3643 14688;14689 14688 EQITISQLSLVDLAGSER 18 0 1 Unmodified _EQITISQLSLVDLAGSER_ 0 0 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 985.0282 2 980.023294 1958.03203 61520.77 0.78902 0.00077325 -0.11624 -0.00011392 0.67278 0.00065934 980.02273649939 985.027758328721 132.66 0.52884 132.66 132.46 132.99 0 101 23 9 0 0 0 2.1085E-05 2 79778 83.823 83.823 1 1.3377 1.091 0 9470400 4014200 5456200 9350 1312 3551 3643 14690;14691 14691 EQITQHIADLSSK 13 1 0 Unmodified _EQITQHIADLSSK_ 0 0 0 P49916;K7ERZ5;K7ENR9;Q96DF0 P49916 P49916 LIG3 DNA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3848 2 735.383362 1468.75217 74168.13 0.26719 0.00019649 0.61945 0.00045554 0.88664 0.00065202 735.384296251321 739.390292349358 53.004 0.31969 53.004 52.824 53.144 0 81 24 4 0 0 0 0.00012158 1 29566 91.939 91.939 1 0.6415 0.66274 0 29110000 17898000 11212000 9351 1589 3552 3644 14692 14692 EQITQHIADLSSK 13 1 0 Unmodified _EQITQHIADLSSK_ 0 0 0 P49916;K7ERZ5;K7ENR9;Q96DF0 P49916 P49916 LIG3 DNA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.8844 2 735.383362 1468.75217 70911.52 0.58855 0.00043281 0.029268 2.1523E-05 0.61782 0.00045433 735.383218914352 739.39013917146 51.526 0.40114 51.526 51.288 51.689 0 83 30 4 0 0 0 4.2375E-06 3 29165 122.55 122.55 1 0.51358 0.5131 0 15189000 10156000 5033700 9352 1589 3552 3644 14693;14694;14695 14693 EQITQHIADLSSK 13 1 0 Unmodified _EQITQHIADLSSK_ 0 0 0 P49916;K7ERZ5;K7ENR9;Q96DF0 P49916 P49916 LIG3 DNA ligase 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.386 2 735.383362 1468.75217 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.282 1 51.282 50.782 51.782 3.8147E-06 0 0 0 0.0013149 1 29054 74.698 58.445 1 9353 1589 3552 3644 14696 14696 EQITQHIADLSSK 13 1 0 Unmodified _EQITQHIADLSSK_ 0 0 0 P49916;K7ERZ5;K7ENR9;Q96DF0 P49916 P49916 LIG3 DNA ligase 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.791 3 490.591334 1468.75217 89656.6 0.25879 0.00012696 0.1424 6.9859E-05 0.40119 0.00019682 490.591424053566 493.597322348153 51.493 0.65082 51.493 51.139 51.789 0 144 51 5 0 0 0 0.03458 1 29183 36.292 36.292 1 0.46991 0.46907 0 14747000 9801900 4945500 9354 1589 3552 3644 14697 14697 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 1 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.4329 2 812.433052 1622.85155 66955.85 0.90798 0.00073767 0.12071 9.8072E-05 1.0287 0.00083574 812.433211428048 820.447198966127 42.186 0.44921 42.186 41.774 42.223 0 151 32 9 0 0 0 0.0001717 1 22132 121.68 121.68 1 0.69178 0.81579 0 515390000 309610000 205780000 9355 106 3553 3645 14698 14698 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 1 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.3008 3 541.957794 1622.85155 81745.38 0.78584 0.00042589 -0.41998 -0.00022761 0.36586 0.00019828 541.957955238015 547.300225834237 42.186 1.3922 42.186 41.704 43.096 -3.8147E-06 757 108 12 0 0 0 4.2756E-05 3 22148 86.498 86.498 1 0.68237 0.80424 0 1602600000 981620000 621010000 9356 106 3553 3645 14699;14700;14701 14699 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 1 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.853 2 812.433052 1622.85155 67169.16 0.68347 0.00055527 0.20957 0.00017026 0.89304 0.00072554 812.433242408989 820.447407226877 42.269 0.42081 42.269 42.207 42.628 0 196 32 11 0 0 0 3.083E-13 1 22597 114.76 114.76 1 0.59191 0.69812 0 381630000 238340000 143290000 9357 106 3553 3645 14702 14702 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 1 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3005 3 541.957794 1622.85155 80851.38 0.74434 0.0004034 -0.40458 -0.00021927 0.33975 0.00018413 541.957685082085 547.300330232958 41.018 0.99707 41.018 40.677 41.674 0 597 80 11 0 0 0 3.2456E-05 3 21849 89.992 89.992 1 0.67258 0.78856 0 1174100000 669950000 504110000 9358 106 3553 3645 14703;14704;14705 14704 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 1 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.4479 2 812.433052 1622.85155 66852.06 0.82698 0.00067187 0.10035 8.1528E-05 0.92733 0.0007534 812.433212486627 820.447174318506 41.029 0.83147 41.029 40.711 41.543 0 411 67 9 0 0 0 3.971E-09 2 21914 130.56 119.64 1 0.65074 0.76071 0 558230000 331000000 227230000 9359 106 3553 3645 14706;14707 14707 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 1 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.3007 3 541.957794 1622.85155 80204.52 0.41731 0.00022617 -0.32808 -0.0001778 0.089236 4.8362E-05 541.957932276033 547.300231832463 48.846 1.576 48.846 48.431 50.007 0 864 128 12 0 0 0 0.028334 2 23678 23.842 23.596 1 0.83479 0.70181 0 303750000 162310000 141440000 9360 106 3553 3645 14708;14709 14708 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 1 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.4474 2 812.433052 1622.85155 66395.77 0.46823 0.00038041 0.24004 0.00019502 0.70827 0.00057543 812.433270602013 820.447288166362 48.834 1.0466 48.834 48.342 49.388 0 501 82 10 0 0 0 0.0011424 1 23716 80.17 62.361 1 0.79977 0.67773 0 65700000 34548000 31152000 9361 106 3553 3645 14710 14710 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 1 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.9576 3 541.957794 1622.85155 80802.15 0.25 0.00013549 -0.54353 -0.00029457 -0.29353 -0.00015908 541.957811887094 547.300134661651 49.098 2.1165 49.098 48.478 50.594 0 923 171 12 0 0 0 0.0018137 2 23257 46.319 46.319 1 0.82936 0.71341 0 231120000 118970000 112150000 9362 106 3553 3645 14711;14712 14711 EQIVPKPEEEVAQKK 15 3 0 Unmodified _EQIVPKPEEEVAQKK_ 0 0 2 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.656 3 584.656115 1750.94651 78516.2 0.47857 0.0002798 0.023421 1.3693E-05 0.50199 0.00029349 584.65612342611 592.670248622258 32.702 0.48071 32.702 32.478 32.958 0 257 44 8 0 0 0 4.235E-05 2 16302 68.944 65.04 1 0.77461 0.93236 0 81805000 47298000 34508000 9363 106 3554 3646 14713;14714 14714 EQIVPKPEEEVAQKK 15 3 0 Unmodified _EQIVPKPEEEVAQKK_ 0 0 2 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.4818 2 876.480534 1750.94651 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.761 1 32.761 32.261 33.261 0 0 0 0 1.3915E-06 1 16299 102.62 74.389 1 9364 106 3554 3646 14715 14715 EQIVPKPEEEVAQKK 15 3 0 Unmodified _EQIVPKPEEEVAQKK_ 0 0 2 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.6702 3 584.656115 1750.94651 78430.23 0.54496 0.00031862 -0.56966 -0.00033305 -0.024695 -1.4438E-05 584.655810101229 592.669944003369 31.23 0.45517 31.23 31.029 31.484 -1.9073E-06 261 39 9 0 0 0 5.1441E-05 2 15407 85.28 81.376 1 0.69541 0.81285 0 103100000 50094000 53001000 9365 106 3554 3646 14716;14717 14717 EQIVPKPEEEVAQKK 15 3 0 Unmodified _EQIVPKPEEEVAQKK_ 0 0 2 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.6559 3 584.656115 1750.94651 77986.38 0.43591 0.00025486 -0.088476 -5.1728E-05 0.34743 0.00020313 584.656112672658 592.670255649208 37.244 0.85181 37.244 36.961 37.812 0 452 65 10 0 0 0 4.235E-05 2 16695 68.944 64.773 1 0.85481 0.80059 0 78728000 42477000 36251000 9366 106 3554 3646 14718;14719 14719 EQIVPKPEEEVAQKK 15 3 0 Unmodified _EQIVPKPEEEVAQKK_ 0 0 2 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.9902 3 584.656115 1750.94651 78179.18 0.3435 0.00020083 -0.19158 -0.00011201 0.15193 8.8825E-05 584.656019995092 592.670156370626 37.074 0.94915 37.074 36.722 37.671 0 527 79 10 0 0 0 0.001693 2 16150 41.695 36.152 1 0.88508 0.87537 0 59868000 33845000 26023000 9367 106 3554 3646 14720;14721 14720 EQIVVDLSHPGVSEDDQVSR 20 0 1 Unmodified _EQIVVDLSHPGVSEDDQVSR_ 0 0 0 O60701;Q9NQ82 O60701 O60701 UGDH;GDH UDP-glucose 6-dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.3652 3 737.029228 2208.06585 NaN NaN NaN -0.68064 -0.00050165 NaN NaN NaN NaN 79.041 0.38969 79.041 78.8 79.189 0 0 0 0 6.6196E-06 1 46814 64.83 56.35 1 NaN NaN 0 10850000 0 10850000 9368 1397 3555 3647 14722 14722 EQIVVDLSHPGVSEDDQVSR 20 0 1 Unmodified _EQIVVDLSHPGVSEDDQVSR_ 0 0 0 O60701;Q9NQ82 O60701 O60701 UGDH;GDH UDP-glucose 6-dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.3649 3 737.029228 2208.06585 NaN NaN NaN -0.78413 -0.00057793 NaN NaN NaN NaN 78 0.3616 78 77.807 78.169 0 0 0 0 1.5562E-07 1 47270 74.364 66.372 1 NaN NaN 0 11675000 0 11675000 9369 1397 3555 3647 14723 14723 EQIYDVYR 8 0 1 Unmodified _EQIYDVYR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.2704 2 543.266739 1084.51892 82156.02 0.70164 0.00038118 -0.24625 -0.00013378 0.45539 0.0002474 543.266781324676 548.270712297679 56.887 0.8946 56.887 56.499 57.394 0 402 73 7 0 0 0 0.010329 2 31923 72.485 15.938 1 1.7678 1.8393 0 38166000 13336000 24830000 9370 261 3556 3648 14724;14725 14724 EQIYDVYR 8 0 1 Unmodified _EQIYDVYR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.2714 2 543.266739 1084.51892 81398.1 0.36628 0.00019899 0.17262 9.378E-05 0.5389 0.00029277 543.266936227724 548.270895531512 56.014 1.0955 56.014 55.403 56.499 0 377 84 6 0 0 0 0.013465 2 32125 65.252 18.058 1 1.8309 2.1059 0 53354000 19205000 34149000 9371 261 3556 3648 14726;14727 14727 EQIYDVYR 8 0 1 Unmodified _EQIYDVYR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.2706 2 543.266739 1084.51892 82825.8 0.44517 0.00024185 0.037839 2.0557E-05 0.48301 0.0002624 543.266516784972 548.270670418905 66.72 1.1001 66.72 66.358 67.459 0 216 66 6 0 0 0 0.034442 1 33942 49.418 15.329 1 1.6041 1.3854 0 2724400 928890 1795500 9372 261 3556 3648 14728 14728 EQLAELQSGFVK 12 1 0 Unmodified _EQLAELQSGFVK_ 0 0 0 Q08379 Q08379 Q08379 GOLGA2 Golgin subfamily A member 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.8678 2 674.858992 1347.70343 NaN NaN NaN 0.12265 8.2774E-05 NaN NaN NaN NaN 81.33 0.36999 81.33 81.09 81.46 0 0 0 0 0.0021009 1 49623 70.496 19.404 1 NaN NaN 0 11947000 0 11947000 9373 1692 3557 3649 14729 14729 EQLAQAMFDHIPVGVGSK 18 1 0 Oxidation (M) _EQLAQAM(ox)FDHIPVGVGSK_ EQLAQAM(1)FDHIPVGVGSK EQLAQAM(50.4)FDHIPVGVGSK 0 1 0 Q9Y3I0;B4DNA0;B4DNG5 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.9995 3 648.327892 1941.96185 73155.73 0.69849 0.00045285 -0.085988 -5.5748E-05 0.61251 0.0003971 648.662638204631 651.333825586421 83.236 0.55274 83.236 82.998 83.551 0 240 47 7 0 0 0 1.9036E-05 1 49782 50.397 40.609 1 2.0589 2.2257 0 35482000 11783000 23699000 9374 2137 3558 3650 14730 14730 1972 EQLAQAMFDHIPVGVGSK 18 1 0 Oxidation (M) _EQLAQAM(ox)FDHIPVGVGSK_ EQLAQAM(1)FDHIPVGVGSK EQLAQAM(64.83)FDHIPVGVGSK 0 1 0 Q9Y3I0;B4DNA0;B4DNG5 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3339 3 648.327892 1941.96185 72967.52 0.62865 0.00040757 -0.5665 -0.00036728 0.062152 4.0295E-05 648.662385327541 650.99933329098 82.246 0.53604 82.246 81.957 82.494 0 265 47 8 0 0 0 8.1916E-06 1 50210 64.83 64.83 1 1.8149 2.0072 0 45156000 14961000 30196000 9375 2137 3558 3650 14731 14731 1972 EQLAQAMFDHIPVGVGSK 18 1 0 Unmodified _EQLAQAMFDHIPVGVGSK_ 0 0 0 Q9Y3I0;B4DNA0;B4DNG5 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.6686 3 642.996254 1925.96693 77972.05 0.74932 0.00048181 0.13571 8.7258E-05 0.88503 0.00056907 642.996044462516 646.002173891946 116.76 0.30296 116.76 116.55 116.86 7.6294E-06 42 13 5 0 0 0 0.0040868 1 67777 25.508 25.508 1 1.3595 1.1085 0 1886300 752480 1133800 9376 2137 3558 3651 14732 14732 EQLAQAVAR 9 0 1 Unmodified _EQLAQAVAR_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H0Y394;Q6ZS03;H7C0A4;Q5HYC5 A0A024R4E5 A0A024R4E5 HDLBP;DKFZp686L08115 Vigilin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.2795 2 493.274898 984.535243 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.96 1 30.96 30.46 31.46 0 0 0 0 0.0093753 1 15221 64.265 7.0871 1 9377 154 3559 3652 14733 14733 EQLDNQLDAYMSK 13 1 0 Oxidation (M) _EQLDNQLDAYM(ox)SK_ EQLDNQLDAYM(1)SK EQLDNQLDAYM(49.08)SK 0 1 0 X6R700;Q9Y3Y2 X6R700 X6R700 CHTOP Chromatin target of PRMT1 protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 785.8577 2 785.85632 1569.69809 NaN NaN NaN 0.11707 9.1999E-05 NaN NaN NaN NaN 65.431 0.55667 65.431 65.142 65.698 0 0 0 0 0.0055469 1 33815 49.081 42.421 1 NaN NaN 0 1025800 1025800 0 9378 2141 3560 3653 14734 14734 1982 EQLEEEEEAK 10 1 0 Unmodified _EQLEEEEEAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.2847 2 617.277697 1232.54084 77940.65 0.6824 0.00042123 -0.40928 -0.00025264 0.27312 0.00016859 617.277472860809 621.284508305668 21.537 0.41176 21.537 21.389 21.801 1.9073E-06 131 23 8 0 0 0 2.253E-09 2 7763 128.36 128.36 1 1.7882 2.0067 0 67091000 23757000 43334000 9379 81 3561 3654 14735;14736 14736 EQLEGLLER 9 0 1 Unmodified _EQLEGLLER_ 0 0 0 Q9P186;Q5SQH5;A0A140T8Y5;B4DZ28;Q5SQH4;O60231 Q9P186 Q9P186 DHX16;DBP2 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.7971 2 543.793121 1085.57169 85485.63 0.31622 0.00017196 -0.10526 -5.7238E-05 0.21096 0.00011472 543.792530016818 548.797447982463 74.876 0.54509 74.876 74.597 75.142 0 158 48 5 0 0 0 0.030087 1 45043 46.001 18.698 1 0.59041 0.58901 0 16673000 9389900 7283300 9380 597 3562 3655 14737 14737 EQLELFQNIR 10 0 1 Unmodified _EQLELFQNIR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.3511 2 645.346052 1288.67755 NaN NaN NaN -0.099552 -6.4246E-05 NaN NaN NaN NaN 96.678 0.272 96.678 96.525 96.797 0 0 0 0 0.0030333 1 58876 78.149 30.575 1 NaN NaN 0 10186000 0 10186000 9381 1183 3563 3656 14738 14738 EQLELFQNIR 10 0 1 Unmodified _EQLELFQNIR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.3506 2 645.346052 1288.67755 75509.78 0.88913 0.0005738 -0.73838 -0.00047651 0.15076 9.7291E-05 645.345188447724 650.349664561702 96.057 0.83784 96.057 95.679 96.517 0 244 71 5 0 0 0 6.7166E-06 2 59888 107.69 99.768 1 1.1241 1.2302 0 33375000 17370000 16005000 9382 1183 3563 3656 14739;14740 14740 EQLELFQNIRPLFINK 16 1 1 Unmodified _EQLELFQNIRPLFINK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.3848 3 668.042192 2001.10475 74153.48 0.97909 0.00065408 0.054757 3.658E-05 1.0339 0.00069066 668.376588418423 674.049701388363 119.48 0.84631 119.48 119.08 119.92 7.6294E-06 400 55 10 0 0 0 4.1245E-09 2 76796 107.61 107.61 1 1.1731 1.4106 0 83049000 38709000 44340000 9383 1183 3564 3657 14741;14742 14742 EQLELFQNIRPLFINK 16 1 1 Unmodified _EQLELFQNIRPLFINK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1011.0732 2 1001.55965 2001.10475 NaN NaN NaN 0.41566 0.00041631 NaN NaN NaN NaN 119.49 0.59447 119.49 119.16 119.75 -7.6294E-06 0 0 0 2.3658E-07 1 76770 94.767 75.668 1 NaN NaN 0 8175800 0 8175800 9384 1183 3564 3657 14743 14743 EQLELFQNIRPLFINK 16 1 1 Unmodified _EQLELFQNIRPLFINK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1001.5568 2 1001.55965 2001.10475 NaN NaN NaN -1.3776 -0.0013798 NaN NaN NaN NaN 119.52 0.50292 119.52 119.24 119.74 0 0 0 0 1.03E-07 1 76855 100.93 87.268 1 NaN NaN 0 8465000 8465000 0 9385 1183 3564 3657 14744 14744 EQLELFQNIRPLFINK 16 1 1 Unmodified _EQLELFQNIRPLFINK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.0502 3 668.042192 2001.10475 73856.28 0.69105 0.00046165 0.18377 0.00012277 0.87482 0.00058442 668.376683107681 674.04977680674 118.77 0.73677 118.77 118.46 119.19 0 340 46 11 0 0 0 5.4165E-10 2 78139 112.02 112.02 1 1.1634 1.3742 0 144600000 67081000 77516000 9386 1183 3564 3657 14745;14746 14745 EQLELFQNIRPLFINK 16 1 1 Unmodified _EQLELFQNIRPLFINK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1011.0733 2 1001.55965 2001.10475 61052.76 0.47881 0.00047956 0.92589 0.00092734 1.4047 0.0014069 1002.06170308067 1010.57114254179 118.78 0.74323 118.78 118.39 119.13 -7.6294E-06 165 46 6 0 0 0 8.4343E-08 3 78141 132.32 132.32 1 1.4423 1.6611 0 27757000 10944000 16814000 9387 1183 3564 3657 14747;14748;14749 14747 EQLELFQNIRPLFINK 16 1 1 Unmodified _EQLELFQNIRPLFINK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.0422 3 668.042192 2001.10475 73877.3 0.61095 0.00040814 -0.32503 -0.00021714 0.28592 0.00019101 668.376301238101 674.383702741682 131.18 0.55757 131.18 130.92 131.48 -1.5259E-05 180 24 12 0 0 0 7.0129E-05 2 79537 64.52 64.52 1 1.6345 1.4406 0 37758000 13745000 24012000 9388 1183 3564 3657 14750;14751 14750 EQLELFQNIRPLFINK 16 1 1 Unmodified _EQLELFQNIRPLFINK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.0494 3 668.042192 2001.10475 73984.55 0.91267 0.0006097 -0.06935 -4.6329E-05 0.84332 0.00056337 668.376555153988 674.049627364593 130.91 0.61957 130.91 130.68 131.3 0 168 28 11 0 0 0 3.3839E-07 2 78435 97.797 97.797 1 1.3199 1.1222 0 30651000 12336000 18316000 9389 1183 3564 3657 14752;14753 14752 EQLETLRK 8 1 1 Unmodified _EQLETLRK_ 0 0 1 A0A0A6YYG7;Q6IBW4 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.7903 2 508.790381 1015.56621 85867.45 0.22882 0.00011642 0.042324 2.1534E-05 0.27114 0.00013795 508.790383812418 517.801568469671 21.614 0.48199 21.614 21.408 21.89 0 83 23 6 0 0 0 0.00057656 2 7706 133.6 93.027 1 0.89049 1.04 0 48249000 27183000 21065000 9390 491 3565 3658 14754;14755 14755 EQLETLRK 8 1 1 Unmodified _EQLETLRK_ 0 0 1 A0A0A6YYG7;Q6IBW4 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.8021 2 508.790381 1015.56621 83381.98 0.2788 0.00014185 -0.16361 -8.3244E-05 0.11519 5.8608E-05 508.790067954547 517.801432631208 23.638 0.52808 23.638 23.296 23.824 0 76 18 6 0 0 0 0.014967 1 8027 76.478 48.259 1 2.0285 1.7056 0 7168900 2609300 4559700 9391 491 3565 3658 14756 14756 EQLETLRK 8 1 1 Unmodified _EQLETLRK_ 0 0 1 A0A0A6YYG7;Q6IBW4 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.8016 2 508.790381 1015.56621 83930.69 0.17667 8.9887E-05 0.22697 0.00011548 0.40364 0.00020537 508.790285486254 517.801661129356 23.493 0.54703 23.493 23.149 23.696 0 90 22 7 0 0 0 0.011854 1 7477 84.498 50.701 1 1.9022 1.5926 0 5756300 1887800 3868500 9392 491 3565 3658 14757 14757 EQLGEEIDSK 10 1 0 Unmodified _EQLGEEIDSK_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.2775 2 574.2775 1146.54045 80361.06 0.74095 0.00042551 -0.46134 -0.00026494 0.2796 0.00016057 574.277129122989 578.28447507875 35.618 0.79178 35.618 35.304 36.096 3.8147E-06 409 75 8 0 0 0 9.7768E-06 2 18075 105.4 99.855 1 1.156 1.3064 0 142650000 63438000 79217000 9393 2065 3566 3659 14758;14759 14759 EQLGEEIDSK 10 1 0 Unmodified _EQLGEEIDSK_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.2842 2 574.2775 1146.54045 79461.93 0.74494 0.0004278 -0.16287 -9.3534E-05 0.58207 0.00033427 574.277303426081 578.28437851109 34.888 0.8245 34.888 34.54 35.365 0 364 72 10 0 0 0 0.00022929 1 17583 93.111 93.111 1 1.0307 1.1914 0 198430000 92694000 105740000 9394 2065 3566 3659 14760 14760 EQLGEEIDSK 10 1 0 Unmodified _EQLGEEIDSK_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.2781 2 574.2775 1146.54045 78558.93 0.3202 0.00018389 0.081301 4.6689E-05 0.40151 0.00023058 574.277605967513 578.28459551411 40.821 0.94246 40.821 40.48 41.422 0 430 75 8 0 0 0 0.0019203 2 18765 71.451 71.451 1 1.2044 1.0207 0 59683000 26720000 32963000 9395 2065 3566 3659 14761;14762 14762 EQLGEEIDSK 10 1 0 Unmodified _EQLGEEIDSK_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.2778 2 574.2775 1146.54045 79565.66 0.19357 0.00011116 0.13171 7.564E-05 0.32529 0.0001868 574.277614647537 578.284644911555 41.041 1.1308 41.041 40.538 41.669 0 455 89 8 0 0 0 0.00031979 1 18384 90.15 90.15 1 1.217 1.0178 0 44561000 20652000 23909000 9396 2065 3566 3659 14763 14763 EQLHLVMQGDVIR 13 0 1 Oxidation (M) _EQLHLVM(ox)QGDVIR_ EQLHLVM(1)QGDVIR EQLHLVM(67.1)QGDVIR 0 1 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.9444 3 518.60833 1552.80316 83653.07 0.49135 0.00025482 0.06152 3.1905E-05 0.55287 0.00028672 518.608232546363 521.944481732299 63.393 0.81735 63.393 62.966 63.784 0 313 69 7 0 0 0 6.8422E-05 2 37189 67.095 57.808 1 1.4583 1.561 0 25059000 9697800 15361000 9397 1997 3567 3660 14764;14765 14764 1834 EQLLQSNPVLEAFGNAK 17 1 0 Unmodified _EQLLQSNPVLEAFGNAK_ 0 0 0 E9PDF6;B0I1S9;O43795;E7EQD9;Q05CR5;C9JYW1;Q14777 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 933.4979 2 929.48889 1856.96323 64453.01 0.69651 0.0006474 0.034533 3.2098E-05 0.73104 0.0006795 929.487720090218 933.496244746562 127.99 0.4577 127.99 127.79 128.25 0 74 19 6 0 0 0 2.0461E-05 2 76321 83.617 83.617 1 1.8602 1.5151 0 7420000 4459400 2960600 9398 805 3568 3661 14766;14767 14766 EQLMTVLQAGK 11 1 0 Oxidation (M) _EQLM(ox)TVLQAGK_ EQLM(1)TVLQAGK EQLM(91.87)TVLQAGK 0 1 0 Q9BQG0;I3L1L3;I3L311 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3291 2 617.329013 1232.64347 79659.99 0.70229 0.00043354 0.073806 4.5562E-05 0.77609 0.00047911 617.328925927021 621.336544394669 57.271 0.46328 57.271 57.033 57.496 -3.8147E-06 100 32 5 0 0 0 0.00010738 1 32318 91.867 75.409 1 0.56999 0.59201 0 12495000 6687300 5808100 9399 1997 3569 3662 14768 14768 1835 EQLMTVLQAGK 11 1 0 Oxidation (M) _EQLM(ox)TVLQAGK_ EQLM(1)TVLQAGK EQLM(75.29)TVLQAGK 0 1 0 Q9BQG0;I3L1L3;I3L311 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3295 2 617.329013 1232.64347 NaN NaN NaN 0.40634 0.00025085 NaN NaN NaN NaN 58.204 0.5563 58.204 57.935 58.492 0 0 0 0 0.00073676 1 33042 75.294 57.385 1 NaN NaN 0 8748800 8748800 0 9400 1997 3569 3662 14769 14769 1835 EQLMTVLQAGK 11 1 0 Oxidation (M) _EQLM(ox)TVLQAGK_ EQLM(1)TVLQAGK EQLM(94.69)TVLQAGK 0 1 0 Q9BQG0;I3L1L3;I3L311 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.329 2 617.329013 1232.64347 NaN NaN NaN 0.53876 0.00033259 NaN NaN NaN NaN 56.338 0.50673 56.338 56.069 56.576 0 0 0 0 2.6418E-05 1 32474 94.692 59.336 1 NaN NaN 0 9225400 9225400 0 9401 1997 3569 3662 14770 14770 1835 EQLMTVLQAGK 11 1 0 Oxidation (M) _EQLM(ox)TVLQAGK_ EQLM(1)TVLQAGK EQLM(91.87)TVLQAGK 0 1 0 Q9BQG0;I3L1L3;I3L311 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.3295 2 617.329013 1232.64347 NaN NaN NaN 0.43746 0.00027006 NaN NaN NaN NaN 57.292 0.60194 57.292 56.962 57.564 0 0 0 0 8.1177E-05 1 33089 91.867 70.016 1 NaN NaN 0 10167000 10167000 0 9402 1997 3569 3662 14771 14771 1835 EQLMTVLQAGK 11 1 0 Oxidation (M) _EQLM(ox)TVLQAGK_ EQLM(1)TVLQAGK EQLM(52.28)TVLQAGK 0 1 0 Q9BQG0;I3L1L3;I3L311 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.3287 2 617.329013 1232.64347 NaN NaN NaN -0.12363 -7.6322E-05 NaN NaN NaN NaN 67.931 0.58832 67.931 67.605 68.194 0 0 0 0 0.0071342 1 34554 52.278 41.127 1 NaN NaN 0 1138100 1138100 0 9403 1997 3569 3662 14772 14772 1835 EQLRQEQALLEEIER 15 0 2 Unmodified _EQLRQEQALLEEIER_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3386 3 628.665561 1882.97485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.33 1 93.33 92.83 93.83 0 0 0 0 0.011572 1 56601 43.297 27.413 1 9404 1754 3570 3663 14773 14773 EQLRQEQALLEEIER 15 0 2 Unmodified _EQLRQEQALLEEIER_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.3385 3 628.665561 1882.97485 77785.23 0.60698 0.00038159 1.5192 0.00095507 2.1262 0.0013367 628.6688860913 635.338057666014 106.26 0.34579 106.26 106.06 106.41 0 61 16 6 0 0 0 0.0015603 1 60692 42.242 34.833 1 1.9649 1.7884 0 2488700 1006000 1482700 9405 1754 3570 3663 14774 14774 EQLSLPAEFPDK 12 1 0 Unmodified _EQLSLPAEFPDK_ 0 0 0 A8K7H4;O43929;Q96B14;B7Z2M4;Q53TH5;B7Z632 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.35 2 687.351 1372.68745 72352.42 0.62912 0.00043243 -0.37231 -0.00025591 0.25681 0.00017652 687.35050672596 691.358003239599 106.58 0.44522 106.58 106.38 106.82 0 103 27 5 0 0 0 0.021142 2 60916 38.875 38.875 1 1.5154 1.1986 0 5082800 1772100 3310700 + 9406 772 3571 3664 14775;14776 14776 EQLTPSQIMSLEK 13 1 0 Oxidation (M) _EQLTPSQIM(ox)SLEK_ EQLTPSQIM(1)SLEK EQLTPSQIM(73.63)SLEK 0 1 0 H7BYN3;Q6LES8;E5KSX8;E5KSU5;Q00059 H7BYN3 H7BYN3 TFAM Transcription factor A, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.394 2 760.387256 1518.75996 NaN NaN NaN -0.0097363 -7.4034E-06 NaN NaN NaN NaN 74.833 0.37269 74.833 74.64 75.012 0 0 0 0 0.00055161 1 43872 73.632 31.631 1 NaN NaN 0 20101000 0 20101000 9407 1209 3572 3665 14777 14777 926 EQLTPSQIMSLEK 13 1 0 Oxidation (M) _EQLTPSQIM(ox)SLEK_ EQLTPSQIM(1)SLEK EQLTPSQIM(59.2)SLEK 0 1 0 H7BYN3;Q6LES8;E5KSX8;E5KSU5;Q00059 H7BYN3 H7BYN3 TFAM Transcription factor A, mitochondrial ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.3947 2 760.387256 1518.75996 NaN NaN NaN -0.15161 -0.00011528 NaN NaN NaN NaN 86.329 0.65755 86.329 86.179 86.836 0 0 0 0 0.0015683 1 47377 59.198 33.081 1 NaN NaN 0 2462700 0 2462700 9408 1209 3572 3665 14778 14778 926 EQMAQQLAEETQGFQR 16 0 1 Oxidation (M) _EQM(ox)AQQLAEETQGFQR_ EQM(1)AQQLAEETQGFQR EQM(104.24)AQQLAEETQGFQR 0 1 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.4462 2 955.439071 1908.86359 NaN NaN NaN 0.19397 0.00018533 NaN NaN NaN NaN 61.503 0.28981 61.503 61.378 61.668 0 0 0 0 7.4766E-10 1 35214 104.24 87.302 1 NaN NaN 0 4411100 0 4411100 9409 1754 3573 3666 14779 14779 1612 EQMAQQLAEETQGFQR 16 0 1 Oxidation (M) _EQM(ox)AQQLAEETQGFQR_ EQM(1)AQQLAEETQGFQR EQM(50.21)AQQLAEETQGFQR 0 1 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.4445 2 955.439071 1908.86359 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.371 1 62.371 61.871 62.871 0 0 0 0 0.002948 1 35802 50.207 31.583 1 9410 1754 3573 3666 14780 14780 1612 EQMAQQLAEETQGFQR 16 0 1 Oxidation (M) _EQM(ox)AQQLAEETQGFQR_ EQM(1)AQQLAEETQGFQR EQM(76.52)AQQLAEETQGFQR 0 1 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 960.944 2 955.439071 1908.86359 72081.81 0.54772 0.00052332 -0.26643 -0.00025456 0.28129 0.00026876 955.940141936181 960.442678558554 61.531 0.32215 61.531 61.402 61.724 -3.8147E-06 72 29 5 0 0 0 6.5718E-05 1 35997 76.522 74.689 1 1.2386 1.2309 0 8558400 2840500 5717900 9411 1754 3573 3666 14781 14781 1612 EQMIDLQNLLTTQSPSVK 18 1 0 Oxidation (M) _EQM(ox)IDLQNLLTTQSPSVK_ EQM(1)IDLQNLLTTQSPSVK EQM(66)IDLQNLLTTQSPSVK 0 1 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1031.5294 2 1031.03026 2060.04597 59140.94 0.69415 0.00071569 -0.69291 -0.00071441 0.0012367 1.2751E-06 1031.53003453194 1035.53832781473 111.35 0.51805 111.35 111.05 111.56 -7.6294E-06 165 36 6 0 0 0 1.4784E-05 1 70089 66.004 66.004 1 1.5444 1.5531 0 27046000 9939600 17106000 9412 2008 3574 3667 14782 14782 1849 EQMIDLQNLLTTQSPSVK 18 1 0 Oxidation (M) _EQM(ox)IDLQNLLTTQSPSVK_ EQM(1)IDLQNLLTTQSPSVK EQM(69.34)IDLQNLLTTQSPSVK 0 1 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1031.5297 2 1031.03026 2060.04597 59971.55 0.34783 0.00035862 -0.68868 -0.00071005 -0.34085 -0.00035142 1031.52980673814 1035.03759171104 110.85 0.56351 110.85 110.54 111.1 0 157 42 5 0 0 0 1.2274E-05 1 71422 69.345 69.345 1 1.698 1.7514 0 32694000 9457700 23236000 9413 2008 3574 3667 14783 14783 1849 EQMIDLQNLLTTQSPSVK 18 1 0 Oxidation (M) _EQM(ox)IDLQNLLTTQSPSVK_ EQM(1)IDLQNLLTTQSPSVK EQM(52.27)IDLQNLLTTQSPSVK 0 1 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1031.5326 2 1031.03026 2060.04597 59588.82 0.65383 0.00067412 0.17242 0.00017777 0.82626 0.0008519 1031.53216984154 1035.037638657 122.61 0.47899 122.61 122.35 122.83 7.6294E-06 140 23 9 0 0 0 3.3431E-05 1 73102 52.265 52.265 1 1.2663 1.0142 0 20865000 9406100 11459000 9414 2008 3574 3667 14784 14784 1849 EQMIDLQNLLTTQSPSVK 18 1 0 Oxidation (M) _EQM(ox)IDLQNLLTTQSPSVK_ EQM(1)IDLQNLLTTQSPSVK EQM(133.14)IDLQNLLTTQSPSVK 0 1 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1035.0392 2 1031.03026 2060.04597 59881.75 0.66627 0.00068694 0.062885 6.4836E-05 0.72915 0.00075178 1031.53206648379 1035.03735480082 122.39 0.50253 122.39 122.22 122.72 -7.6294E-06 144 23 8 0 0 0 8.5854E-23 1 72077 133.14 133.14 1 1.2231 0.99065 0 24208000 11166000 13043000 9415 2008 3574 3667 14785 14785 1849 EQMRLLK 7 1 1 Oxidation (M) _EQM(ox)RLLK_ EQM(1)RLLK EQM(58.98)RLLK 0 1 1 REV__B5LY70 REV__B5LY70 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2629 2 467.262945 932.511337 86546.83 -0.067562 -3.1569E-05 1.1567 0.00054049 1.0892 0.00050892 467.263053439326 476.275020750557 21.451 0.33832 21.451 21.203 21.541 0 47 14 6 0 0 0 0.035193 1 7581 58.981 9.6227 1 1.2134 1.4 0 29632000 15101000 14530000 + 9416 2167 3575 3668 14786 14786 2011 EQNIVFNAETYSNLIK 16 1 0 Unmodified _EQNIVFNAETYSNLIK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.4827 2 941.980898 1881.94724 NaN NaN NaN -0.34254 -0.00032266 NaN NaN NaN NaN 112.65 0.62021 112.65 112.25 112.88 0 0 0 0 3.9642E-06 1 71160 100.19 94.463 1 NaN NaN 0 8856100 8856100 0 9417 1207 3576 3669 14787 14787 EQNIVFNAETYSNLIK 16 1 0 Unmodified _EQNIVFNAETYSNLIK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 942.484 2 941.980898 1881.94724 NaN NaN NaN -0.2972 -0.00027996 NaN NaN NaN NaN 112.1 0.55634 112.1 111.7 112.26 7.6294E-06 0 0 0 0.0041308 1 72503 73.881 61.613 1 NaN NaN 0 10931000 10931000 0 9418 1207 3576 3669 14788 14788 EQNIVFNAETYSNLIK 16 1 0 Unmodified _EQNIVFNAETYSNLIK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 942.4827 2 941.980898 1881.94724 NaN NaN NaN -0.95319 -0.00089789 NaN NaN NaN NaN 123.99 0.48142 123.99 123.76 124.24 0 0 0 0 0.013337 1 74142 59.227 52.987 1 NaN NaN 0 3373900 3373900 0 9419 1207 3576 3669 14789 14789 EQNIVFNAETYSNLIK 16 1 0 Unmodified _EQNIVFNAETYSNLIK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 941.9829 2 941.980898 1881.94724 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.8 1 123.8 123.3 124.3 -7.6294E-06 0 0 0 8.0958E-05 1 73167 111.79 95.903 1 9420 1207 3576 3669 14790 14790 EQNLSSQVECLELEK 15 1 0 Unmodified _EQNLSSQVECLELEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.4429 2 903.432923 1804.85129 NaN NaN NaN 1.4375 0.0012987 NaN NaN NaN NaN 84.957 0.3466 84.957 84.799 85.146 0 0 0 0 2.0058E-06 1 50982 92.856 75.914 1 NaN NaN 0 5653800 0 5653800 9421 1581 3577 3670 14791 14791 EQNLSSQVECLELEK 15 1 0 Unmodified _EQNLSSQVECLELEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 907.9423 2 903.432923 1804.85129 NaN NaN NaN -0.1921 -0.00017355 NaN NaN NaN NaN 97.811 0.38187 97.811 97.614 97.996 7.6294E-06 0 0 0 0.020072 1 55093 42.469 36.624 1 NaN NaN 0 1828100 0 1828100 9422 1581 3577 3670 14792 14792 EQPPGYAIDTVQVNGQEK 18 1 0 Unmodified _EQPPGYAIDTVQVNGQEK_ 0 0 0 Q8IXI1 Q8IXI1 Q8IXI1 RHOT2 Mitochondrial Rho GTPase 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 986.9845 2 986.984169 1971.95378 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.237 1 71.237 70.737 71.737 0 0 0 0 0.04567 1 41561 37.156 28.851 1 9423 1893 3578 3671 14793 14793 EQPPTEPGPQSASEVEK 17 1 0 Unmodified _EQPPTEPGPQSASEVEK_ 0 0 0 Q6PK21;A0A0A0MRN5;Q05BV5;Q9NZT2;B3KMQ6;V9H0E3 Q6PK21 Q6PK21 OGFR Opioid growth factor receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 909.4377 2 905.428695 1808.84284 64748.64 0.43128 0.00039049 0.66554 0.0006026 1.0968 0.00099309 905.930138848404 909.43709106758 38.882 0.27291 38.882 38.763 39.036 0 73 22 6 0 0 0 0.00019612 1 20467 50.088 50.088 1 1.4488 1.4872 0 9472500 3297900 6174600 9424 469 3579 3672 14794 14794 EQPQLTSTCHIAISNSENLLGK 22 1 0 Unmodified _EQPQLTSTCHIAISNSENLLGK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 817.0809 3 814.076072 2439.20639 66271.05 0.55433 0.00045127 -0.053205 -4.3313E-05 0.50113 0.00040795 814.744496827545 817.081763909422 88.363 0.93834 88.363 87.991 88.929 -7.6294E-06 350 71 7 0 0 0 2.1194E-07 2 53075 51.469 51.469 1 1.7634 1.986 0 123540000 30243000 93298000 9425 1569;1864 3580 3673 14795;14796 14796 EQPQLTSTCHIAISNSENLLGK 22 1 0 Unmodified _EQPQLTSTCHIAISNSENLLGK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.7494 3 814.076072 2439.20639 66265.14 0.65215 0.0005309 0.083967 6.8355E-05 0.73611 0.00059925 814.744690624383 817.081861833174 87.413 0.80533 87.413 87.066 87.871 0 355 63 8 0 0 0 9.5853E-06 2 54046 44.541 44.541 1 1.7948 2.0456 0 150800000 41930000 108870000 9426 1569;1864 3580 3673 14797;14798 14798 EQPQLTSTCHIAISNSENLLGK 22 1 0 Unmodified _EQPQLTSTCHIAISNSENLLGK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 814.4124 3 814.076072 2439.20639 66314.36 0.51959 0.00042299 0.125 0.00010176 0.6446 0.00052475 814.411779370268 817.081863333061 101.56 1.0362 101.56 101.01 102.04 -7.6294E-06 478 70 14 0 0 0 1.2134E-05 2 57471 43.175 43.175 1 3.5447 3.0946 0 170690000 37608000 133090000 9427 1569;1864 3580 3673 14799;14800 14800 EQPQLTSTCHIAISNSENLLGK 22 1 0 Unmodified _EQPQLTSTCHIAISNSENLLGK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 814.4131 3 814.076072 2439.20639 66286.31 0.56225 0.00045771 -0.055289 -4.501E-05 0.50696 0.0004127 814.41152749701 817.081700001709 101.37 0.94485 101.37 100.87 101.81 0 432 62 14 0 0 0 0.0014631 2 56486 26.005 26.005 1 3.4311 2.9395 0 126690000 26557000 100130000 9428 1569;1864 3580 3673 14801;14802 14802 EQQEAIEHIDEVQNEIDR 18 0 1 Unmodified _EQQEAIEHIDEVQNEIDR_ 0 0 0 A0A0C4DFV9;B2RCX0;A0A024R895;Q5VXV3;A0A087X027;Q01105;P0DME0 A0A0C4DFV9 A0A0C4DFV9 SET;SETSIP Protein SET;Protein SETSIP ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.682 3 732.345216 2194.01382 NaN NaN NaN -0.4696 -0.00034391 NaN NaN NaN NaN 75.912 0.3439 75.912 75.72 76.064 0 0 0 0 0.011607 1 44730 32.329 23.51 1 NaN NaN 0 5805400 0 5805400 9429 244 3581 3674 14803 14803 EQQHVMEELFQSSFR 15 0 1 Oxidation (M) _EQQHVM(ox)EELFQSSFR_ EQQHVM(1)EELFQSSFR EQQHVM(67.85)EELFQSSFR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.962 3 637.62823 1909.86286 74115.94 0.56425 0.00035978 0.04445 2.8343E-05 0.6087 0.00038813 637.62778893886 640.964368923011 70.851 0.75424 70.851 70.496 71.251 0 261 56 7 0 0 0 5.6405E-05 1 42336 67.846 67.846 1 1.0476 1.1156 0 24396000 10156000 14240000 9430 1665 3582 3675 14804 14804 1447 EQQHVMEELFQSSFR 15 0 1 Unmodified _EQQHVMEELFQSSFR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.2969 3 632.296592 1893.86795 75934.51 0.80693 0.00051022 -0.57164 -0.00036145 0.23529 0.00014877 632.296054718452 635.632242068978 109.93 0.43086 109.93 109.72 110.15 0 92 22 6 0 0 0 0.00022166 1 62518 32.692 29.143 1 0.39863 0.35168 0 2454800 1605700 849120 9431 1665 3582 3676 14805 14805 EQQIVIQSSGGLSK 14 1 0 Unmodified _EQQIVIQSSGGLSK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z4T3;H0Y8S0 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.9006 2 737.399012 1472.78347 71184.51 0.83962 0.00061913 0.20699 0.00015263 1.0466 0.00077177 737.39930248656 741.406314125504 55.488 0.55817 55.488 55.232 55.79 0 254 46 7 0 0 0 2.3013E-05 1 31129 125.36 125.36 1 2.4522 2.7595 0 119260000 34998000 84266000 9432 1092 3583 3677 14806 14806 EQQIVIQSSGGLSK 14 1 0 Unmodified _EQQIVIQSSGGLSK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z4T3;H0Y8S0 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.406 2 737.399012 1472.78347 70654.35 0.9133 0.00067347 -0.094706 -6.9836E-05 0.8186 0.00060363 737.398902714198 741.405966223562 54.631 0.55104 54.631 54.33 54.881 -3.8147E-06 253 44 7 0 0 0 2.928E-09 2 31075 138.45 138.45 1 2.3451 2.6207 0 95040000 30928000 64113000 9433 1092 3583 3677 14807;14808 14807 EQQIVIQSSGGLSK 14 1 0 Unmodified _EQQIVIQSSGGLSK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z4T3;H0Y8S0 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.4067 2 737.399012 1472.78347 71861.85 0.5648 0.00041648 0.10296 7.5922E-05 0.66776 0.0004924 737.399114705884 741.406181277079 64.547 0.58297 64.547 64.241 64.824 0 219 39 8 0 0 0 0.00018459 2 33270 92.247 92.247 1 1.5018 1.1634 0 13275000 5647900 7627000 9434 1092 3583 3677 14809;14810 14810 EQQIVIQSSGGLSK 14 1 0 Unmodified _EQQIVIQSSGGLSK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z4T3;H0Y8S0 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.3993 2 737.399012 1472.78347 71638.55 0.4638 0.000342 0.00075226 5.5471E-07 0.46455 0.00034256 737.39907282849 741.406200994597 65.099 0.56374 65.099 64.805 65.369 0 244 41 8 0 0 0 0.0002436 2 32772 78.324 78.324 1 1.6224 1.3378 0 12051000 4454000 7597100 9435 1092 3583 3677 14811;14812 14811 EQQLLSTLK 9 1 0 Unmodified _EQQLLSTLK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.313 2 530.305864 1058.59717 83896.13 0.34771 0.00018439 0.36984 0.00019613 0.71755 0.00038052 530.305814345941 534.313243914905 62.533 1.4628 62.533 62.269 63.731 0 513 129 8 0 0 0 2.778E-08 2 36685 147.51 101.79 1 1.1446 1.3048 0 151360000 70454000 80909000 9436 1803 3584 3678 14813;14814 14814 EQQLLSTLK 9 1 0 Unmodified _EQQLLSTLK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.3132 2 530.305864 1058.59717 83727.87 0.4544 0.00024097 0.7692 0.00040791 1.2236 0.00064888 530.306140681925 534.313254444926 73.283 1.9017 73.283 72.739 74.641 0 488 131 10 0 0 0 0.0059982 2 38799 65.305 30.497 1 1.9316 1.5535 0 21793000 7793300 14000000 9437 1803 3584 3678 14815;14816 14816 EQQLLSTLK 9 1 0 Unmodified _EQQLLSTLK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 534.313 2 530.305864 1058.59717 82941.81 0.41908 0.00022224 0.69499 0.00036856 1.1141 0.0005908 530.306496843206 534.31317119026 73.732 1.6264 73.732 73.324 74.95 0 368 108 9 0 0 0 0.0012793 2 38161 87.476 44.317 1 1.9065 1.5412 0 23753000 8677500 15076000 9438 1803 3584 3678 14817;14818 14817 EQQLPVNEETLFQK 14 1 0 Unmodified _EQQLPVNEETLFQK_ 0 0 0 Q7Z3K3;B4DSK8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 851.9365 2 851.935959 1701.85737 66286.1 0.93413 0.00079582 -0.18966 -0.00016158 0.74447 0.00063424 851.935533915154 855.94294854372 91.562 0.56584 91.562 91.338 91.904 0 149 45 5 0 0 0 7.4152E-05 1 55421 89.403 83.3 1 0.77337 0.79519 0 17468000 9197500 8270000 9439 1874 3585 3679 14819 14819 EQQLPVNEETLFQK 14 1 0 Unmodified _EQQLPVNEETLFQK_ 0 0 0 Q7Z3K3;B4DSK8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.9452 2 851.935959 1701.85737 66933.72 0.8675 0.00073905 -0.58393 -0.00049747 0.28356 0.00024158 851.935040960815 855.942741086869 90.992 0.5956 90.992 90.669 91.265 -7.6294E-06 149 48 5 0 0 0 7.1736E-10 3 56222 122.7 110.97 1 0.76856 0.77668 0 13170000 8110600 5059600 9440 1874 3585 3679 14820;14821;14822 14821 EQQLPVNEETLFQK 14 1 0 Unmodified _EQQLPVNEETLFQK_ 0 0 0 Q7Z3K3;B4DSK8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 851.9362 2 851.935959 1701.85737 66205.01 0.69834 0.00059494 0.070853 6.0363E-05 0.76919 0.0006553 851.935980028609 855.942942436948 105.07 0.58242 105.07 104.77 105.35 0 174 34 8 0 0 0 0.017083 1 59855 34.773 34.773 1 1.2225 0.97959 0 8409000 3829700 4579300 9441 1874 3585 3679 14823 14823 EQSILELGSLLAK 13 1 0 Unmodified _EQSILELGSLLAK_ 0 0 0 O00231;J3QRY4;B4DTS5 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.9037 2 700.903399 1399.79225 NaN NaN NaN 0.045365 3.1796E-05 NaN NaN NaN NaN 122.89 0.34286 122.89 122.71 123.05 0 0 0 0 0.00076991 1 79603 79.693 60.422 1 NaN NaN 0 4240100 4240100 0 9442 1360 3586 3680 14824 14824 EQSILELGSLLAK 13 1 0 Unmodified _EQSILELGSLLAK_ 0 0 0 O00231;J3QRY4;B4DTS5 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.9039 2 700.903399 1399.79225 NaN NaN NaN -0.17084 -0.00011974 NaN NaN NaN NaN 122.33 0.38647 122.33 122.18 122.57 0 0 0 0 0.0012406 1 81160 76.843 62.637 1 NaN NaN 0 4020600 4020600 0 9443 1360 3586 3680 14825 14825 EQSQPCADNAVLSSGLTAAR 20 0 1 Unmodified _EQSQPCADNAVLSSGLTAAR_ 0 0 0 P19784;H3BV19;H3BSA1 P19784 P19784 CSNK2A2 Casein kinase II subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1038.4974 2 1037.99474 2073.97493 61096.88 0.39624 0.00041129 1.2561 0.0013039 1.6524 0.0017151 1038.49705713289 1043.50311868919 75.693 0.25077 75.693 75.601 75.852 0 50 21 5 0 0 0 0.004018 1 45627 30.483 25.099 1 0.47775 0.48301 0 9755700 3712700 6043000 9444 1501 3587 3681 14826 14826 EQSSEAAETGVSENEENPVR 20 0 1 Unmodified _EQSSEAAETGVSENEENPVR_ 0 0 0 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1081.4769 2 1081.47763 2160.94071 NaN NaN NaN -0.73742 -0.0007975 NaN NaN NaN NaN 40.475 0.13615 40.475 40.409 40.545 0 0 0 0 0.019979 1 21172 34.179 29.195 1 NaN NaN 0 3094900 3094900 0 9445 1270 3588 3682 14827 14827 EQSSEAAETGVSENEENPVR 20 0 1 Unmodified _EQSSEAAETGVSENEENPVR_ 0 0 0 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1086.4797 2 1081.47763 2160.94071 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.476 1 40.476 39.976 40.976 3.8147E-06 0 0 0 0.045274 1 21180 32.734 27.35 1 9446 1270 3588 3682 14828 14828 EQSVQEIPVSR 11 0 1 Unmodified _EQSVQEIPVSR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.3333 2 636.333141 1270.65173 NaN NaN NaN 0.15124 9.6238E-05 NaN NaN NaN NaN 45.484 0.66005 45.484 45.127 45.787 0 0 0 0 0.001491 1 24463 82.914 67.763 1 NaN NaN 0 11387000 11387000 0 + 9447 1157 3589 3683 14829 14829 EQSVQEIPVSR 11 0 1 Unmodified _EQSVQEIPVSR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3334 2 636.333141 1270.65173 NaN NaN NaN 0.35069 0.00022316 NaN NaN NaN NaN 44.66 0.4942 44.66 44.347 44.841 0 0 0 0 8.0266E-08 1 24320 107.24 87.973 1 NaN NaN 0 16611000 16611000 0 + 9448 1157 3589 3683 14830 14830 EQTEGEYSSLEHESAR 16 0 1 Unmodified _EQTEGEYSSLEHESAR_ 0 0 0 A0A087WZN1;O43837;A0A087X2E5 A0A087WZN1 A0A087WZN1 IDH3B Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.2747 3 617.937898 1850.79186 76917.16 0.90951 0.00056202 -0.10635 -6.572E-05 0.80315 0.0004963 617.937742372623 621.273972044265 32.076 0.37253 32.076 31.84 32.212 0 154 35 7 0 0 0 0.00012007 1 15801 51.03 50.452 1 1.4105 1.4363 0 18550000 8009800 10540000 9449 439 3590 3684 14831 14831 EQTEGEYSSLEHESAR 16 0 1 Unmodified _EQTEGEYSSLEHESAR_ 0 0 0 A0A087WZN1;O43837;A0A087X2E5 A0A087WZN1 A0A087WZN1 IDH3B Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.4076 2 926.403209 1850.79186 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.99 1 31.99 31.49 32.49 1.9073E-06 0 0 0 0.00086566 1 15817 62.528 39.302 1 9450 439 3590 3684 14832 14832 EQTEGEYSSLEHESAR 16 0 1 Unmodified _EQTEGEYSSLEHESAR_ 0 0 0 A0A087WZN1;O43837;A0A087X2E5 A0A087WZN1 A0A087WZN1 IDH3B Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 926.4052 2 926.403209 1850.79186 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.028 1 32.028 31.528 32.528 0 0 0 0 0.022942 1 15839 42.789 27.587 1 9451 439 3590 3684 14833 14833 EQTEGEYSSLEHESAR 16 0 1 Unmodified _EQTEGEYSSLEHESAR_ 0 0 0 A0A087WZN1;O43837;A0A087X2E5 A0A087WZN1 A0A087WZN1 IDH3B Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.6085 3 617.937898 1850.79186 77497.66 0.33833 0.00020907 -0.28976 -0.00017905 0.048571 3.0014E-05 617.937516868313 621.273753753415 31.289 0.35044 31.289 31.134 31.484 1.9073E-06 136 30 7 0 0 0 6.1675E-07 1 15434 93.754 93.754 1 1.4094 1.4124 0 18258000 7565900 10692000 9452 439 3590 3684 14834 14834 EQTEGEYSSLEHESAR 16 0 1 Unmodified _EQTEGEYSSLEHESAR_ 0 0 0 A0A087WZN1;O43837;A0A087X2E5 A0A087WZN1 A0A087WZN1 IDH3B Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.4067 2 926.403209 1850.79186 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.257 1 31.257 30.757 31.757 0 0 0 0 1.4404E-07 1 15429 102.66 80.463 1 9453 439 3590 3684 14835 14835 EQTEGEYSSLEHESAR 16 0 1 Unmodified _EQTEGEYSSLEHESAR_ 0 0 0 A0A087WZN1;O43837;A0A087X2E5 A0A087WZN1 A0A087WZN1 IDH3B Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.4022 2 926.403209 1850.79186 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.346 1 31.346 30.846 31.846 0 0 0 0 0.0010256 1 15487 68.809 61.836 1 9454 439 3590 3684 14836 14836 EQTEQILR 8 0 1 Unmodified _EQTEQILR_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93;A0A140TA71 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7767 2 508.772188 1015.52982 NaN NaN NaN 0.25897 0.00013176 NaN NaN NaN NaN 33.797 0.74201 33.797 33.461 34.203 0 0 0 0 1.8515E-05 1 16799 127.84 40.521 1 NaN NaN 0 7988200 0 7988200 9455 1507 3591 3685 14837 14837 EQTEQILR 8 0 1 Unmodified _EQTEQILR_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93;A0A140TA71 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.7767 2 508.772188 1015.52982 NaN NaN NaN 0.39868 0.00020284 NaN NaN NaN NaN 33.169 0.62401 33.169 32.98 33.604 0 0 0 0 0.012137 1 16536 74.127 23.521 1 NaN NaN 0 11378000 0 11378000 9456 1507 3591 3685 14838 14838 EQTLAQIDFMQK 12 1 0 Oxidation (M) _EQTLAQIDFM(ox)QK_ EQTLAQIDFM(1)QK EQTLAQIDFM(70.98)QK 0 1 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.3597 2 734.361041 1466.70753 NaN NaN NaN -0.43992 -0.00032306 NaN NaN NaN NaN 75.672 0.51244 75.672 75.418 75.93 0 0 0 0 0.00064117 1 44629 70.977 45.76 1 NaN NaN 0 5226000 5226000 0 9457 1928 3592 3686 14839 14839 1761 EQTLAQIDFMQK 12 1 0 Oxidation (M) _EQTLAQIDFM(ox)QK_ EQTLAQIDFM(1)QK EQTLAQIDFM(59.07)QK 0 1 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3672 2 734.361041 1466.70753 NaN NaN NaN -0.10734 -7.8824E-05 NaN NaN NaN NaN 74.637 0.4537 74.637 74.511 74.964 0 0 0 0 0.0022218 1 44843 59.067 39.752 1 NaN NaN 0 8865100 0 8865100 9458 1928 3592 3686 14840 14840 1761 EQTLSPTITSGLHNIAR 17 0 1 Unmodified _EQTLSPTITSGLHNIAR_ 0 0 0 H7BXG7;A0A1S5UZ19;A0A024RDH6;A0A024RDD3;D6REX3;O94979;H0Y8W8 H7BXG7 H7BXG7 SEC31A;SEC31L1 Protein transport protein Sec31A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.6676 3 613.330402 1836.96938 NaN NaN NaN -0.72491 -0.00044461 NaN NaN NaN NaN 80.239 0.47726 80.239 80.029 80.506 -7.6294E-06 0 0 0 0.0019092 1 47684 48.547 42.109 1 NaN NaN 0 4636200 0 4636200 9459 384 3593 3687 14841 14841 EQVANSAFVER 11 0 1 Unmodified _EQVANSAFVER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.3127 2 625.312209 1248.60986 76120.83 0.56487 0.00035322 0.021189 1.325E-05 0.58606 0.00036647 625.312264515509 630.316352540601 41.924 0.84578 41.924 41.61 42.456 0 380 64 9 0 0 0 2.4004E-08 2 22011 121.6 110.74 1 1.97 2.3329 0 408620000 137290000 271340000 9460 379 3594 3688 14842;14843 14843 EQVANSAFVER 11 0 1 Unmodified _EQVANSAFVER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.3141 2 625.312209 1248.60986 76386.24 0.78536 0.00049109 -0.16625 -0.00010396 0.61911 0.00038714 625.312179390714 630.316166087351 40.975 1.0175 40.975 40.484 41.502 0 476 81 8 0 0 0 2.8749E-12 3 21762 137.95 117.05 1 1.9753 2.2692 0 194500000 60511000 133980000 9461 379 3594 3688 14844;14845;14846 14845 EQVANSAFVER 11 0 1 Unmodified _EQVANSAFVER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.3125 2 625.312209 1248.60986 76619.01 0.34309 0.00021454 0.027012 1.6891E-05 0.3701 0.00023143 625.312215726062 630.316303204555 48.34 0.96749 48.34 47.82 48.787 0 379 70 8 0 0 0 0.0049191 1 23414 57.149 48.286 1 1.32 1.1078 0 26044000 10815000 15229000 9462 379 3594 3688 14847 14847 EQVANSAFVER 11 0 1 Unmodified _EQVANSAFVER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.3157 2 625.312209 1248.60986 74980.48 0.27257 0.00017044 0.11271 7.0479E-05 0.38528 0.00024092 625.312200430698 630.316362580519 48.74 0.87973 48.74 48.303 49.183 0 408 72 8 0 0 0 0.02141 1 22998 43.282 35.636 1 1.3302 1.1492 0 22871000 10004000 12867000 9463 379 3594 3688 14848 14848 EQVEPTPEDEDDDIELR 17 0 1 Unmodified _EQVEPTPEDEDDDIELR_ 0 0 0 A0A087WZG9;B4DSP0;A0A087WXK2;A0A087WUL4;A0A087WX23;Q86TG7 A0A087WZG9 A0A087WZG9 PEG10 Retrotransposon-derived protein PEG10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1020.4567 2 1014.94765 2027.88074 64833.02 0.22575 0.00022913 0.077629 7.8789E-05 0.30338 0.00030791 1015.44900736638 1020.45363714171 74.333 0.29865 74.333 74.187 74.486 0 51 21 4 0 0 0 3.6217E-05 3 43588 80.469 80.3 1 1.1564 1.1535 0 8717200 4749900 3967300 9464 412 3595 3689 14849;14850;14851 14849 EQVEPTPEDEDDDIELR 17 0 1 Unmodified _EQVEPTPEDEDDDIELR_ 0 0 0 A0A087WZG9;B4DSP0;A0A087WXK2;A0A087WUL4;A0A087WX23;Q86TG7 A0A087WZG9 A0A087WZG9 PEG10 Retrotransposon-derived protein PEG10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1019.9529 2 1014.94765 2027.88074 NaN NaN NaN 0.39637 0.00040229 NaN NaN NaN NaN 73.441 0.26497 73.441 73.262 73.527 0 0 0 0 0.0039715 1 44039 52.071 46.412 1 NaN NaN 0 4125000 0 4125000 9465 412 3595 3689 14852 14852 EQVEVVEFHSNK 12 1 0 Unmodified _EQVEVVEFHSNK_ 0 0 0 Q8NDD1;Q5TBH9;Q5TBI2;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2404 3 482.240412 1443.69941 87336.16 0.41258 0.00019896 -0.52923 -0.00025521 -0.11664 -5.625E-05 482.239646715196 484.91156857933 42.828 0.44886 42.828 42.573 43.022 0 144 36 6 0 0 0 0.0034841 2 23106 45.79 45.79 1 1.3344 1.3734 0 25229000 9057200 16172000 9466 1925 3596 3690 14853;14854 14854 EQVEVVEFHSNK 12 1 0 Unmodified _EQVEVVEFHSNK_ 0 0 0 Q8NDD1;Q5TBH9;Q5TBI2;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 482.2397 3 482.240412 1443.69941 88645.84 0.086399 4.1665E-05 -0.39268 -0.00018937 -0.30628 -0.0001477 482.239956247771 484.911591762243 50.362 0.45624 50.362 50.165 50.621 0 178 36 7 0 0 0 0.042226 1 24667 21.942 21.942 1 1.2039 0.95268 0 4169300 1998200 2171100 9467 1925 3596 3690 14855 14855 EQVEVVEFHSNK 12 1 0 Unmodified _EQVEVVEFHSNK_ 0 0 0 Q8NDD1;Q5TBH9;Q5TBI2;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.8649 2 722.85698 1443.69941 NaN NaN NaN 0.03883 2.8069E-05 NaN NaN NaN NaN 50.341 0.43783 50.341 50.154 50.592 0 0 0 0 0.0052666 1 24611 62.466 52.462 1 NaN NaN 0 3433900 0 3433900 9468 1925 3596 3690 14856 14856 EQVHQGGVELQQLEAGLQEAGEEDTR 26 0 1 Unmodified _EQVHQGGVELQQLEAGLQEAGEEDTR_ 0 0 0 B4E086;K7EJH0;K7EMX1;K7EJV2;K7ESQ2;Q8NBT2 B4E086 B4E086 SPC24 Kinetochore protein Spc24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 951.1251 3 950.788196 2849.34276 63233.84 0.81983 0.00077949 -0.47579 -0.00045237 0.34404 0.00032711 951.12266756415 954.791984925448 101.05 0.65548 101.05 100.77 101.42 -7.6294E-06 223 49 7 0 0 0 1.2775E-09 1 61973 51.619 51.619 1 0.85458 0.88663 0 22633000 13203000 9430200 9469 1061 3597 3691 14857 14857 EQVHQGGVELQQLEAGLQEAGEEDTR 26 0 1 Unmodified _EQVHQGGVELQQLEAGLQEAGEEDTR_ 0 0 0 B4E086;K7EJH0;K7EMX1;K7EJV2;K7ESQ2;Q8NBT2 B4E086 B4E086 SPC24 Kinetochore protein Spc24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 954.1238 3 950.788196 2849.34276 62765.05 0.61668 0.00058633 -0.25698 -0.00024434 0.3597 0.000342 951.122513227694 954.458054140679 100.29 0.58746 100.29 99.944 100.53 0 246 48 7 0 0 0 0.016763 2 62792 19.387 19.387 1 0.95695 1.0452 0 38093000 25837000 12256000 9470 1061 3597 3691 14858;14859 14859 EQVHQGGVELQQLEAGLQEAGEEDTR 26 0 1 Unmodified _EQVHQGGVELQQLEAGLQEAGEEDTR_ 0 0 0 B4E086;K7EJH0;K7EMX1;K7EJV2;K7ESQ2;Q8NBT2 B4E086 B4E086 SPC24 Kinetochore protein Spc24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 950.7906 3 950.788196 2849.34276 61504.48 0.92635 0.00088076 1.0001 0.00095089 1.9265 0.0018317 951.456617284458 954.458595341761 113.59 0.74666 113.59 113.39 114.14 0 155 34 8 0 0 0 1.1751E-06 2 66152 45.941 45.941 1 1.232 1.0596 0 6862600 3454400 3408200 9471 1061 3597 3691 14860;14861 14861 EQVHQGGVELQQLEAGLQEAGEEDTR 26 0 1 Unmodified _EQVHQGGVELQQLEAGLQEAGEEDTR_ 0 0 0 B4E086;K7EJH0;K7EMX1;K7EJV2;K7ESQ2;Q8NBT2 B4E086 B4E086 SPC24 Kinetochore protein Spc24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 951.1241 3 950.788196 2849.34276 62239.12 0.5172 0.00049175 0.041478 3.9437E-05 0.55868 0.00053119 951.12255641341 954.458323131299 113.55 0.56461 113.55 113.28 113.85 0 151 27 8 0 0 0 3.0422E-06 3 65227 40.208 40.208 1 0.96284 0.77837 0 10674000 5584200 5090200 9472 1061 3597 3691 14862;14863;14864 14864 EQVLEPMLNGTDK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTDK_ EQVLEPM(1)LNGTDK EQVLEPM(56.04)LNGTDK 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.3631 2 745.363781 1488.71301 71678.6 0.60125 0.00044815 0.61014 0.00045478 1.2114 0.00090293 745.364039269709 749.872720848232 58.87 0.46358 58.87 58.616 59.079 0 163 37 6 0 0 0 0.00090914 1 33561 56.043 56.043 1 0.78472 0.79317 0 18332000 10059000 8272400 9473 1679 3598 3692 14865 14865 1482 EQVLEPMLNGTDK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTDK_ EQVLEPM(1)LNGTDK EQVLEPM(105.46)LNGTDK 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.3647 2 745.363781 1488.71301 71273.42 0.58756 0.00043794 -0.23579 -0.00017575 0.35177 0.0002622 745.364097240523 749.370349740219 59.291 0.3764 59.291 59.059 59.436 3.8147E-06 137 28 7 0 0 0 2.7767E-06 1 33727 105.46 105.46 1 0.64843 0.63612 0 22766000 13374000 9391300 9474 1679 3598 3692 14866 14866 1482 EQVLEPMLNGTDK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTDK_ EQVLEPM(1)LNGTDK EQVLEPM(95.48)LNGTDK 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.3651 2 745.363781 1488.71301 71307.68 0.66929 0.00049886 1.3369 0.00099647 2.0062 0.0014953 745.365199892779 749.37128737765 57.844 0.47305 57.844 57.643 58.116 0 148 38 6 0 0 0 3.155E-05 1 33490 95.477 95.477 1 0.53819 0.542 0 27815000 17836000 9979400 9475 1679 3598 3692 14867 14867 1482 EQVLEPMLNGTEK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTEK_ EQVLEPM(1)LNGTEK EQVLEPM(121.36)LNGTEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.3705 2 752.371606 1502.72866 69333.44 0.50666 0.0003812 -0.35986 -0.00027074 0.14681 0.00011045 752.371676690711 756.378822537464 58.851 0.56319 58.851 58.481 59.044 0 400 46 11 0 0 0 1.8733E-09 4 33249 121.36 121.36 1 1.0208 1.1967 0 297110000 151590000 145520000 9476 1471 3599 3693 14868;14869;14870;14871 14871 1194 EQVLEPMLNGTEK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTEK_ EQVLEPM(1)LNGTEK EQVLEPM(100.88)LNGTEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.3792 2 752.371606 1502.72866 68730.17 0.45423 0.00034175 -0.25829 -0.00019433 0.19594 0.00014742 752.371303128253 756.378592004561 59.208 0.45781 59.208 59.006 59.463 3.8147E-06 274 34 10 0 0 0 4.5337E-06 2 33769 100.88 100.88 1 0.9747 1.149 0 333910000 161950000 171950000 9477 1471 3599 3693 14872;14873 14872 1194 EQVLEPMLNGTEK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTEK_ EQVLEPM(1)LNGTEK EQVLEPM(135.15)LNGTEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.3792 2 752.371606 1502.72866 68619.09 0.63327 0.00047646 -0.28236 -0.00021244 0.35091 0.00026402 752.37176643593 756.37894090686 57.739 0.5478 57.739 57.465 58.013 0 341 44 11 0 0 0 3.167E-14 4 33417 135.15 135.15 1 0.9791 1.1475 0 319560000 161310000 158250000 9478 1471 3599 3693 14874;14875;14876;14877 14877 1194 EQVLEPMLNGTEK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTEK_ EQVLEPM(1)LNGTEK EQVLEPM(100.69)LNGTEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.3798 2 752.371606 1502.72866 68364.83 0.62735 0.000472 -0.4398 -0.00033089 0.18755 0.00014111 752.371490016344 756.379151905432 68.148 0.56658 68.148 67.899 68.465 0 325 39 11 0 0 0 4.6072E-06 2 35493 100.69 100.69 1 1.0325 0.84834 0 38377000 18555000 19821000 9479 1471 3599 3693 14878;14879 14879 1194 EQVLEPMLNGTEK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTEK_ EQVLEPM(1)LNGTEK EQVLEPM(80.98)LNGTEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.3716 2 752.371606 1502.72866 68851.05 0.59339 0.00044645 -0.0208 -1.565E-05 0.57259 0.0004308 752.371333852415 756.378670077954 68.654 0.87947 68.654 68.401 69.28 0 367 63 10 0 0 0 6.5979E-05 2 35981 84.507 84.507 1 1.0448 0.85358 0 33721000 16893000 16828000 9480 1471 3599 3693 14880;14881 14880 1194 EQVLEPMLNGTEK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTEK_ EQVLEPM(1)LNGTEK EQVLEPM(71.08)LNGTEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.3779 2 752.371606 1502.72866 69194.8 0.59114 0.00044476 -0.91212 -0.00068625 -0.32098 -0.0002415 752.370763346687 756.377620740652 87.13 0.6684 87.13 86.777 87.445 0 170 37 6 0 0 0 9.1073E-05 3 47799 71.085 71.085 1 1.4544 1.1337 0 3753800 1750900 2002900 9481 1471 3599 3693 14882;14883;14884 14882 1194 EQVLEPMLNGTEK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTEK_ EQVLEPM(1)LNGTEK EQVLEPM(72.32)LNGTEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 752.373 2 752.371606 1502.72866 68085.74 0.43953 0.00033069 0.13443 0.00010114 0.57396 0.00043183 752.371789363481 756.379388042997 68.664 0.68591 68.664 68.381 69.067 0 336 48 10 0 0 0 7.8747E-05 2 34997 72.321 72.321 1 1.0224 0.83454 0 26136000 12611000 13526000 9482 1471 3599 3693 14885;14886 14885 1194 EQVLEPMLNGTEK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTEK_ EQVLEPM(1)LNGTEK EQVLEPM(112.13)LNGTEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 752.3717 2 752.371606 1502.72866 68226.38 0.48475 0.00036471 -0.18104 -0.00013621 0.30372 0.00022851 752.371410392514 756.37862395528 69.194 0.62293 69.194 68.934 69.556 0 285 42 10 0 0 0 2.209E-07 2 35493 112.13 112.13 1 1.018 0.84674 0 38559000 19111000 19448000 9483 1471 3599 3693 14887;14888 14887 1194 EQVLEPMLNGTEK 13 1 0 Oxidation (M) _EQVLEPM(ox)LNGTEK_ EQVLEPM(1)LNGTEK EQVLEPM(40.73)LNGTEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.3782 2 752.371606 1502.72866 69074.46 0.49873 0.00037523 -0.61395 -0.00046192 -0.11522 -8.6685E-05 752.371207461875 756.378074062268 87.285 0.65854 87.285 86.9 87.559 0 173 36 6 0 0 0 0.0054654 1 47009 40.727 40.727 1 1.3558 1.0775 0 4033700 1786400 2247300 9484 1471 3599 3693 14889 14889 1194 EQVLEPMLNGTEK 13 1 0 Unmodified _EQVLEPMLNGTEK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.3755 2 744.374149 1486.73374 69234.92 0.66171 0.00049256 0.30594 0.00022773 0.96765 0.00072029 744.374846014553 748.381097138965 87.122 0.96147 87.122 86.67 87.632 0 284 54 7 0 0 0 0.0022588 2 48005 54.486 54.486 1 1.4787 1.1473 0 12819000 5258700 7560100 9485 1471 3599 3694 14890;14891 14891 EQVLEPMLNGTEK 13 1 0 Unmodified _EQVLEPMLNGTEK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.3749 2 744.374149 1486.73374 68785.51 0.57869 0.00043076 0.4896 0.00036444 1.0683 0.00079521 744.374724589361 748.381371752696 87.283 1.0138 87.283 86.84 87.854 0 344 59 9 0 0 0 0.00021605 4 47118 69.721 69.721 1 1.4274 1.1463 0 14980000 5619600 9360500 9486 1471 3599 3694 14892;14893;14894;14895 14894 EQVLQPVSAELLELDIR 17 0 1 Unmodified _EQVLQPVSAELLELDIR_ 0 0 0 Q0EFC6;B4DYK6;A0A024RCR2;P36915;A2AB27 Q0EFC6 Q0EFC6 HSR1;GNL1 Guanine nucleotide-binding protein-like 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.5436 2 976.53858 1951.06261 NaN NaN NaN -0.2266 -0.00022128 NaN NaN NaN NaN 126.62 0.33366 126.62 126.41 126.75 0 0 0 0 1.2205E-08 1 84458 93.011 70.537 1 NaN NaN 0 4005400 0 4005400 9487 366 3600 3695 14896 14896 EQVNDLFSR 9 0 1 Unmodified _EQVNDLFSR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9;B4DM07;A0A087WW90;A0A0D9SF80;A0A0A0MSY2;Q86UP8;Q6EKJ0 X5D2J9 X5D2J9 GTF2I;GTF2IRD2B;GTF2IRD2 General transcription factor II-I;General transcription factor II-I repeat domain-containing protein 2A;General transcription factor II-I repeat domain-containing protein 2B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.2792 2 554.275095 1106.53564 83117.57 0.47605 0.00026386 -0.31153 -0.00017268 0.16451 9.1185E-05 554.274729386083 559.279100909188 62.806 0.55875 62.806 62.587 63.146 -3.8147E-06 203 53 5 0 0 0 0.0022085 1 35978 75.378 56.284 1 1.0407 1.0838 0 21760000 10328000 11432000 9488 789 3601 3696 14897 14897 EQVNDLFSR 9 0 1 Unmodified _EQVNDLFSR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9;B4DM07;A0A087WW90;A0A0D9SF80;A0A0A0MSY2;Q86UP8;Q6EKJ0 X5D2J9 X5D2J9 GTF2I;GTF2IRD2B;GTF2IRD2 General transcription factor II-I;General transcription factor II-I repeat domain-containing protein 2A;General transcription factor II-I repeat domain-containing protein 2B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.2784 2 554.275095 1106.53564 84367.62 0.5791 0.00032098 -0.10647 -5.9016E-05 0.47263 0.00026196 554.275067157806 559.279022245347 61.672 0.62211 61.672 61.414 62.036 0 197 57 5 0 0 0 0.0014178 1 36054 85.67 62.599 1 1.0588 1.1538 0 29335000 12683000 16652000 9489 789 3601 3696 14898 14898 EQVNDLFSR 9 0 1 Unmodified _EQVNDLFSR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9;B4DM07;A0A087WW90;A0A0D9SF80;A0A0A0MSY2;Q86UP8;Q6EKJ0 X5D2J9 X5D2J9 GTF2I;GTF2IRD2B;GTF2IRD2 General transcription factor II-I;General transcription factor II-I repeat domain-containing protein 2A;General transcription factor II-I repeat domain-containing protein 2B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.2783 2 554.275095 1106.53564 81667.23 0.27873 0.00015449 -0.26313 -0.00014585 0.015599 8.6464E-06 554.274847625862 559.279333777207 71.985 0.43508 71.985 71.754 72.19 -7.6294E-06 90 34 4 0 0 0 0.017303 1 37938 53.089 33.312 1 1.0842 0.92856 0 2740400 1354900 1385600 9490 789 3601 3696 14899 14899 EQVPSGAELER 11 0 1 Unmodified _EQVPSGAELER_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8069 2 607.804217 1213.59388 NaN NaN NaN 0.26768 0.0001627 NaN NaN NaN NaN 39.926 0.55873 39.926 39.576 40.134 0 0 0 0 0.0029048 1 21103 70.1 40.627 1 NaN NaN 0 11340000 0 11340000 9491 640 3602 3697 14900 14900 EQVSPLETTLEK 12 1 0 Unmodified _EQVSPLETTLEK_ 0 0 0 Q92878 Q92878 Q92878 RAD50 DNA repair protein RAD50 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3693 2 687.361564 1372.70858 NaN NaN NaN 0.41704 0.00028666 NaN NaN NaN NaN 71.289 0.51568 71.289 71.063 71.579 0 0 0 0 0.0011759 1 41616 81.017 55.078 1 NaN NaN 0 8754900 0 8754900 9492 1953 3603 3698 14901 14901 EQWANLEQLSAIR 13 0 1 Unmodified _EQWANLEQLSAIR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.4074 2 779.404629 1556.79471 NaN NaN NaN -1.4479 -0.0011285 NaN NaN NaN NaN 106.24 0.46264 106.24 106.02 106.48 0 0 0 0 8.427E-06 1 67681 99.522 73.584 1 NaN NaN 0 6463700 0 6463700 9493 415 3604 3699 14902 14902 EQWANLEQLSAIR 13 0 1 Unmodified _EQWANLEQLSAIR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.4092 2 779.404629 1556.79471 67710.52 0.88158 0.00068711 0.63047 0.00049139 1.5121 0.0011785 779.405809056372 784.408918043785 118.34 0.46523 118.34 118.05 118.51 0 48 18 4 0 0 0 0.00013525 1 69872 99.752 85.072 1 3.1648 2.6432 0 3240800 723100 2517700 9494 415 3604 3699 14903 14903 EQWIQDAEECDR 12 0 1 Unmodified _EQWIQDAEECDR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.833 2 789.828094 1577.64164 70905.16 0.62528 0.00049386 -0.014288 -1.1285E-05 0.61099 0.00048258 789.827873053471 795.333769419116 58.951 0.41241 58.951 58.725 59.138 3.8147E-06 68 32 4 0 0 0 0.00090263 1 33382 64.103 62.906 1 0.69133 0.71002 0 6446700 3071100 3375600 9495 1418 3605 3700 14904 14904 EQWIQDAEECDR 12 0 1 Unmodified _EQWIQDAEECDR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.8292 2 789.828094 1577.64164 NaN NaN NaN 0.15315 0.00012096 NaN NaN NaN NaN 58.86 0.3023 58.86 58.626 58.929 3.8147E-06 0 0 0 0.0019311 1 33373 72.434 65.409 1 NaN NaN 0 4653200 4653200 0 9496 1418 3605 3700 14905 14905 EQWIQDAEECDR 12 0 1 Unmodified _EQWIQDAEECDR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.8288 2 789.828094 1577.64164 71023.45 0.75922 0.00059965 0.17305 0.00013668 0.93227 0.00073633 789.827531876939 794.832559349669 57.881 0.35941 57.881 57.745 58.105 3.8147E-06 54 29 4 0 0 0 0.00044103 1 33530 70.942 69.744 1 0.5618 0.55823 0 7421600 3797600 3624000 9497 1418 3605 3700 14906 14906 EQWIQDAEECDR 12 0 1 Unmodified _EQWIQDAEECDR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 794.8319 2 789.828094 1577.64164 70549.58 0.52233 0.00041255 -0.061682 -4.8718E-05 0.46065 0.00036383 789.828099925309 794.832224391432 68.62 0.39423 68.62 68.453 68.848 0 106 29 6 0 0 0 0.0041381 1 35852 54.259 54.259 1 0.58913 0.50033 0 2885100 1615700 1269500 9498 1418 3605 3700 14907 14907 EQWIQDAEECDR 12 0 1 Unmodified _EQWIQDAEECDR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.8286 2 789.828094 1577.64164 70646.51 0.65677 0.00051873 -0.50078 -0.00039553 0.15598 0.0001232 789.827668319629 794.831970258759 69.314 0.39799 69.314 69.141 69.539 0 91 26 5 0 0 0 0.0044091 1 35510 53.569 49.415 1 0.75515 0.67703 0 2282800 1259500 1023300 9499 1418 3605 3700 14908 14908 EQYLELVSAALR 12 0 1 Unmodified _EQYLELVSAALR_ 0 0 0 B3KY51;Q8NC60 B3KY51 B3KY51 NOA1 Nitric oxide-associated protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.3864 2 696.380091 1390.74563 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.53 1 116.53 116.03 117.03 0 0 0 0 0.00024423 1 74414 83 58.657 1 9500 956 3606 3701 14909 14909 EQYSDAPEEIR 11 0 1 Unmodified _EQYSDAPEEIR_ 0 0 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.8074 2 668.804414 1335.59427 75323.63 0.69663 0.00046591 -0.10208 -6.8268E-05 0.59455 0.00039764 668.804201483478 673.808544803628 40.702 0.56998 40.702 40.37 40.94 -3.8147E-06 242 51 6 0 0 0 0.0012566 3 21186 68.893 56.869 1 0.8273 0.84635 0 32912000 19674000 13238000 9501 1927 3607 3702 14910;14911;14912 14911 EQYSDAPEEIR 11 0 1 Unmodified _EQYSDAPEEIR_ 0 0 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.8096 2 668.804414 1335.59427 74358.3 0.91914 0.00061472 0.030866 2.0643E-05 0.95 0.00063537 668.804403844537 673.808509250197 39.775 0.61301 39.775 39.466 40.079 0 224 50 6 0 0 0 0.00038376 2 20969 82.749 66.547 1 0.81138 0.89528 0 41518000 20633000 20885000 9502 1927 3607 3702 14913;14914 14914 EQYSDAPEEIR 11 0 1 Unmodified _EQYSDAPEEIR_ 0 0 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.8091 2 668.804414 1335.59427 74758.34 0.24102 0.00016119 0.04825 3.227E-05 0.28927 0.00019346 668.804545074382 673.808297005176 47.672 0.56975 47.672 47.422 47.992 0 228 43 7 0 0 0 0.00047422 2 22596 75.652 68.432 1 0.90713 0.74522 0 8664400 4521200 4143200 9503 1927 3607 3702 14915;14916 14916 EQYSDAPEEIRDAR 14 0 2 Unmodified _EQYSDAPEEIRDAR_ 0 0 1 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.2609 3 560.260424 1677.75944 NaN NaN NaN 0.63882 0.0003579 NaN NaN NaN NaN 37.948 0.43711 37.948 37.795 38.233 0 0 0 0 0.049903 1 19814 30.543 25.114 1 NaN NaN 0 10390000 10390000 0 9504 1927 3608 3703 14917 14917 EQYSDAPEEIRDAR 14 0 2 Unmodified _EQYSDAPEEIRDAR_ 0 0 1 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.9329 3 560.260424 1677.75944 79242 0.46142 0.00025851 -0.046992 -2.6327E-05 0.41443 0.00023219 560.260390777132 566.932565830545 45.576 0.55564 45.576 45.282 45.837 0 255 41 9 0 0 0 0.00042746 2 21786 44.457 44.457 1 0.92333 0.78266 0 8720100 4309700 4410400 9505 1927 3608 3703 14918;14919 14919 EQYSDAPEEIRDAR 14 0 2 Unmodified _EQYSDAPEEIRDAR_ 0 0 1 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.2598 3 560.260424 1677.75944 80133.03 0.52192 0.00029241 -0.16212 -9.0832E-05 0.3598 0.00020158 560.594576866905 566.932510681463 45.909 0.63979 45.909 45.559 46.199 3.8147E-06 238 43 8 0 0 0 0.0011515 2 21445 39.005 39.005 1 0.91969 0.83575 0 6294300 3071300 3223000 9506 1927 3608 3703 14920;14921 14921 ERDSELSDTDSGCCLGQSESDK 22 1 1 Unmodified _ERDSELSDTDSGCCLGQSESDK_ 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 825.6694 3 825.66759 2473.98094 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.736 1 33.736 33.236 34.236 -3.8147E-06 0 0 0 0.00011416 1 16814 56.72 55.422 1 9507 406 3609 3704 14922 14922 ERDSELSDTDSGCCLGQSESDK 22 1 1 Unmodified _ERDSELSDTDSGCCLGQSESDK_ 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 832.0098 3 825.66759 2473.98094 67098.4 0.47309 0.00039061 -0.41008 -0.00033859 0.063007 5.2023E-05 826.002254311482 832.00949050569 39.554 0.39894 39.554 39.361 39.76 0 141 28 8 0 0 0 0.055469 1 18113 13.396 13.396 1 1.2406 1.0702 0 2634800 1277900 1356900 9508 406 3609 3704 14923 14923 ERFAGVDIR 9 0 2 Unmodified _ERFAGVDIR_ 0 0 1 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76;Q6IPX4;B4DP32 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.7881 2 531.788173 1061.56179 82226.5 0.32335 0.00017196 -0.32889 -0.0001749 -0.0055316 -2.9417E-06 531.788057795821 541.796399689591 47.871 0.27468 47.871 47.73 48.005 0 73 18 6 0 0 0 0.0083576 2 26704 83.948 36.099 1 0.94494 1.0537 0 25331000 11751000 13580000 9509 1636 3610 3705 14924;14925 14925 ERIDFLPHYDTLVK 14 1 1 Unmodified _ERIDFLPHYDTLVK_ 0 0 1 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.6534 3 582.64555 1744.91482 78279.99 0.55265 0.000322 -0.80505 -0.00046906 -0.25241 -0.00014706 582.644522668924 588.652211640171 103.87 0.78304 103.87 103.65 104.43 -7.6294E-06 117 34 5 0 0 0 0.00079625 2 59107 51.643 51.643 1 1.292 1.0801 0 3451900 1288800 2163200 9510 684 3611 3706 14926;14927 14927 ERLEDLNFPEIK 12 1 1 Unmodified _ERLEDLNFPEIK_ 0 0 1 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7;B4DY21 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.8973 2 751.896106 1501.77766 69107.13 1.0972 0.00082497 -0.012395 -9.3198E-06 1.0848 0.00081565 751.896116281954 760.907475074338 91.023 0.86548 91.023 90.636 91.501 0 249 70 7 0 0 0 0.0044138 1 55103 65.347 65.347 1 0.95166 1.1055 0 29955000 15244000 14711000 9511 2139 3612 3707 14928 14928 ERLEDLNFPEIK 12 1 1 Unmodified _ERLEDLNFPEIK_ 0 0 1 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7;B4DY21 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.9084 2 751.896106 1501.77766 68869.87 0.63622 0.00047837 -0.3582 -0.00026933 0.27802 0.00020904 751.895492009284 760.907356564331 89.768 0.98277 89.768 89.068 90.051 0 220 81 4 0 0 0 0.0017447 3 55135 71.153 71.153 1 0.97881 1.1362 0 37294000 18187000 19108000 9512 2139 3612 3707 14929;14930;14931 14929 ERLEQQVPVNQVFGQDEMIDVIGVTK 26 1 1 Oxidation (M) _ERLEQQVPVNQVFGQDEM(ox)IDVIGVTK_ ERLEQQVPVNQVFGQDEM(1)IDVIGVTK ERLEQQVPVNQVFGQDEM(49.44)IDVIGVTK 0 1 1 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 996.8447 3 996.509605 2986.50699 60378.11 0.89047 0.00088736 -0.39031 -0.00038895 0.50016 0.00049841 997.177830221787 1002.85120016335 110.44 0.85141 110.44 110.01 110.87 0 610 59 15 0 0 0 2.7601E-08 1 69208 49.445 49.445 1 1.1898 1.4481 0 540080000 248360000 291720000 9513 1554;936 3613 3708 14932 14932 764 ERLEQQVPVNQVFGQDEMIDVIGVTK 26 1 1 Oxidation (M) _ERLEQQVPVNQVFGQDEM(ox)IDVIGVTK_ ERLEQQVPVNQVFGQDEM(1)IDVIGVTK ERLEQQVPVNQVFGQDEM(86.73)IDVIGVTK 0 1 1 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 996.5111 3 996.509605 2986.50699 60666.07 0.55378 0.00055184 -0.28992 -0.00028891 0.26385 0.00026293 996.843959304439 1002.85125464053 109.74 0.74045 109.74 109.39 110.13 0 479 48 14 0 0 0 6.9072E-15 2 70337 86.732 86.732 1 1.1989 1.4262 0 445170000 203710000 241470000 9514 1554;936 3613 3708 14933;14934 14934 764 ERLEQQVPVNQVFGQDEMIDVIGVTK 26 1 1 Oxidation (M) _ERLEQQVPVNQVFGQDEM(ox)IDVIGVTK_ ERLEQQVPVNQVFGQDEM(1)IDVIGVTK ERLEQQVPVNQVFGQDEM(55.05)IDVIGVTK 0 1 1 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 996.8452 3 996.509605 2986.50699 60522.3 0.41295 0.00041151 0.12619 0.00012575 0.53914 0.00053726 996.844236144114 1002.85147968795 120.65 0.73512 120.65 120.42 121.15 0 304 36 15 0 0 0 7.0348E-10 2 70719 55.046 55.046 1 0.68737 0.58861 0 135220000 78177000 57044000 9515 1554;936 3613 3708 14935;14936 14935 764 ERLEQQVPVNQVFGQDEMIDVIGVTK 26 1 1 Unmodified _ERLEQQVPVNQVFGQDEMIDVIGVTK_ 0 0 1 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 991.5123 3 991.177967 2970.51207 59923.93 0.3843 0.00038091 -0.53411 -0.0005294 -0.14981 -0.00014849 991.511852806991 997.519032927346 129.28 0.55257 129.28 129.07 129.62 0 216 25 14 0 0 0 2.01E-09 1 78162 51.104 51.104 1 1.2422 1.0974 0 42393000 18859000 23534000 9516 1554;936 3613 3709 14937 14937 ERLEQQVPVNQVFGQDEMIDVIGVTK 26 1 1 Unmodified _ERLEQQVPVNQVFGQDEMIDVIGVTK_ 0 0 1 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 991.5103 3 991.177967 2970.51207 59974.09 0.54395 0.00053915 -0.65239 -0.00064664 -0.10845 -0.00010749 991.511915411422 997.853171283236 129.22 0.5377 129.22 128.86 129.4 0 196 22 13 0 0 0 0.034863 1 77296 17.383 17.383 1 1.3335 1.1341 0 33234000 15461000 17773000 9517 1554;936 3613 3709 14938 14938 ERLPTTAQQEDPEK 14 1 1 Unmodified _ERLPTTAQQEDPEK_ 0 0 1 Q4VC44;I3L188;J3KNW1;B3KPY2;B3KP60;I3L1A7;I3L287 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.9095 2 821.407566 1640.80058 67145.83 0.74942 0.00061558 -0.38228 -0.00031401 0.36713 0.00030157 821.909242176293 830.417683883155 25.364 0.27132 25.364 25.219 25.49 -1.9073E-06 48 10 6 0 0 0 6.6147E-29 2 10987 169.62 146.39 1 0.84507 0.96528 0 21149000 11628000 9520800 9518 1781 3614 3710 14939;14940 14940 ERLPTTAQQEDPEK 14 1 1 Unmodified _ERLPTTAQQEDPEK_ 0 0 1 Q4VC44;I3L188;J3KNW1;B3KPY2;B3KP60;I3L1A7;I3L287 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.9409 3 547.940803 1640.80058 81649.78 0.45459 0.00024909 -0.2778 -0.00015222 0.17679 9.687E-05 547.940628760686 553.948039280513 25.366 0.24746 25.366 25.219 25.467 0 42 9 6 0 0 0 6.4414E-05 2 11016 59.68 54.696 1 0.95933 1.0988 0 22906000 11993000 10914000 9519 1781 3614 3710 14941;14942 14942 ERLPTTAQQEDPEK 14 1 1 Unmodified _ERLPTTAQQEDPEK_ 0 0 1 Q4VC44;I3L188;J3KNW1;B3KPY2;B3KP60;I3L1A7;I3L287 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.9484 3 547.940803 1640.80058 81468.44 0.28817 0.0001579 -0.2579 -0.00014131 0.030272 1.6587E-05 547.940742702724 553.948202016444 29.757 0.40254 29.757 29.575 29.977 0 140 30 7 0 0 0 0.020716 2 12174 26.929 26.929 1 1.2597 1.0408 0 4059400 1917600 2141700 9520 1781 3614 3710 14943;14944 14943 ERLPTTAQQEDPEK 14 1 1 Unmodified _ERLPTTAQQEDPEK_ 0 0 1 Q4VC44;I3L188;J3KNW1;B3KPY2;B3KP60;I3L1A7;I3L287 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.9481 3 547.940803 1640.80058 81092.02 0.15778 8.6452E-05 -0.46879 -0.00025687 -0.31101 -0.00017042 548.274773847598 553.947986623692 29.985 0.36712 29.985 29.769 30.136 1.9073E-06 117 23 7 0 0 0 0.015948 1 11796 29.844 27.086 1 1.4114 1.2021 0 3069400 1413000 1656500 9521 1781 3614 3710 14945 14945 ERNGLSLAALK 11 1 1 Unmodified _ERNGLSLAALK_ 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.2387 3 391.2313 1170.67207 96645.84 -0.083251 -3.257E-05 -0.24889 -9.7373E-05 -0.33214 -0.00012994 391.23113126509 397.238589826126 58.439 0.72013 58.439 58.144 58.864 0 208 58 6 0 0 0 0.0055754 2 33043 48.044 37.992 1 0.63584 0.72202 0 24155000 14984000 9171300 9522 1489 3615 3711 14946;14947 14947 ERNGLSLAALK 11 1 1 Unmodified _ERNGLSLAALK_ 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.3426 2 586.343312 1170.67207 77712.91 0.35672 0.00020916 0.17978 0.00010541 0.53649 0.00031457 586.343504405672 595.35443533337 58.706 1.1388 58.706 58.079 59.218 0 498 91 8 0 0 0 0.0018763 2 33012 88.596 51.252 1 0.60347 0.72941 0 183390000 121170000 62217000 9523 1489 3615 3711 14948;14949 14948 ERNGLSLAALK 11 1 1 Unmodified _ERNGLSLAALK_ 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 391.2309 3 391.2313 1170.67207 96423.16 0.32334 0.0001265 -0.45443 -0.00017779 -0.1311 -5.1289E-05 391.231091792047 397.238522593352 56.565 0.56681 56.565 56.364 56.931 3.8147E-06 163 41 6 0 0 0 0.0093294 1 32528 43.897 28.267 1 0.66105 0.77044 0 44207000 24919000 19288000 9524 1489 3615 3711 14950 14950 ERNGLSLAALK 11 1 1 Unmodified _ERNGLSLAALK_ 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.3542 2 586.343312 1170.67207 78403.8 0.68408 0.0004011 -0.067464 -3.9557E-05 0.61661 0.00036155 586.343256307741 595.35450485246 56.558 0.88461 56.558 56.299 57.184 0 359 63 9 0 0 0 0.020641 1 32537 71.03 35.519 1 0.59122 0.70235 0 357990000 207050000 150940000 9525 1489 3615 3711 14951 14951 ERNGLSLAALK 11 1 1 Unmodified _ERNGLSLAALK_ 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 397.2386 3 391.2313 1170.67207 94338.59 0.24956 9.7637E-05 -0.36951 -0.00014456 -0.11994 -4.6926E-05 391.231085784642 397.238627334771 67.36 1.1635 67.36 66.873 68.037 0 379 83 7 0 0 0 0.032184 1 34915 31.989 25.101 1 0.43647 0.37694 0 13572000 9105000 4466500 9526 1489 3615 3711 14952 14952 ERNGLSLAALK 11 1 1 Unmodified _ERNGLSLAALK_ 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 397.2387 3 391.2313 1170.67207 95230.06 0.0048488 1.897E-06 -0.28039 -0.0001097 -0.27554 -0.0001078 391.231091217993 397.238677275107 67.393 1.009 67.393 67.1 68.109 0 283 67 7 0 0 0 0.035367 2 34207 31.04 22.554 1 0.39732 0.33611 0 10970000 7835500 3134600 9527 1489 3615 3711 14953;14954 14953 ERNGLSLAALKK 12 2 1 Unmodified _ERNGLSLAALKK_ 0 0 2 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 433.9292 3 433.929621 1298.76703 90345.49 0.071259 3.0921E-05 -0.30187 -0.00013099 -0.23061 -0.00010007 433.929433667025 442.608236832357 45.512 0.53352 45.512 45.322 45.856 -3.8147E-06 146 33 7 0 0 0 0.021445 1 21231 38.178 28.39 1 0.4819 0.46915 0 7531900 5157700 2374100 9528 1489 3616 3712 14955 14955 ERPEGETGDLGK 12 1 1 Unmodified _ERPEGETGDLGK_ 0 0 1 Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.3248 2 644.312406 1286.61026 80308.18 0.44702 0.00028802 -0.32674 -0.00021052 0.12028 7.7499E-05 644.312281661767 653.324259308881 17.856 0.22556 17.856 17.749 17.975 0 26 8 6 0 0 0 0.0011484 1 4966 89.171 73.29 1 0.4018 0.42965 0 12952000 9031100 3920800 9529 1701 3617 3713 14956 14956 ERPEGETGDLGK 12 1 1 Unmodified _ERPEGETGDLGK_ 0 0 1 Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3242 2 644.312406 1286.61026 75684.28 0.58966 0.00037993 -0.23921 -0.00015412 0.35045 0.0002258 644.312163828059 653.323607644319 17.791 0.2561 17.791 17.656 17.912 0 23 9 5 0 0 0 0.0009295 3 4675 91.549 91.549 1 0.40848 0.45089 0 6740000 4263900 2476100 9530 1701 3617 3713 14957;14958;14959 14957 ERPGEQSEVAQLIQQTLEQER 21 0 2 Unmodified _ERPGEQSEVAQLIQQTLEQER_ 0 0 1 D3DTX6;Q96SB3;B3KNT0;Q96B17 D3DTX6 D3DTX6 PPP1R9B Neurabin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 830.4257 3 823.417374 2467.23029 66693.05 1.1063 0.00091097 0.63692 0.00052445 1.7433 0.0014354 823.417991787655 830.424147952193 126.22 0.37369 126.22 126.02 126.4 0 56 13 8 0 0 0 0.023088 1 75798 20.296 17.058 1 1.5724 1.3568 0 5162800 1569800 3593000 9531 1190 3618 3714 14960 14960 ERPGEQSEVAQLIQQTLEQER 21 0 2 Unmodified _ERPGEQSEVAQLIQQTLEQER_ 0 0 1 D3DTX6;Q96SB3;B3KNT0;Q96B17 D3DTX6 D3DTX6 PPP1R9B Neurabin-2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 830.4247 3 823.417374 2467.23029 NaN NaN NaN 0.20348 0.00016755 NaN NaN NaN NaN 126 0.42525 126 125.76 126.19 -7.6294E-06 0 0 0 8.2479E-06 1 74836 55.734 36.148 1 NaN NaN 0 1945200 0 1945200 9532 1190 3618 3714 14961 14961 ERPIILDPADPTLNVAEGYR 20 0 2 Unmodified _ERPIILDPADPTLNVAEGYR_ 0 0 1 B3KN79;Q15646 B3KN79 B3KN79 OASL 2-5-oligoadenylate synthase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 747.3981 3 747.062092 2238.16445 70226.08 0.6558 0.00048993 -0.29268 -0.00021865 0.36312 0.00027128 747.062462955373 753.733158889544 114.85 0.35873 114.85 114.69 115.05 -7.6294E-06 82 16 8 0 0 0 0.001379 1 66331 32.227 32.227 1 1.4142 1.2801 0 4566200 1900900 2665300 9533 911 3619 3715 14962 14962 ERPPEEVAAR 10 0 2 Unmodified _ERPPEEVAAR_ 0 0 1 B4DS66;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;Q05DN3 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.3024 2 577.301644 1152.58874 78355.45 0.61417 0.00035456 -1.1086 -0.00064001 -0.49444 -0.00028544 577.300709472718 587.309561904539 19.278 0.38935 19.278 19.166 19.556 0 83 23 6 0 0 0 1.2559E-08 2 5959 128.03 104.51 1 1.1201 1.2179 0 48866000 23071000 25795000 9534 1774;1029;1128 3620 3716 14963;14964 14963 ERPPEEVAAR 10 0 2 Unmodified _ERPPEEVAAR_ 0 0 1 B4DS66;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;Q05DN3 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3027 2 577.301644 1152.58874 80413.01 0.15162 8.7531E-05 0.046866 2.7056E-05 0.19849 0.00011459 577.301614935965 587.309867541343 19.179 0.67135 19.179 19.089 19.76 0 60 28 7 0 0 0 7.9971E-30 1 5652 183.72 150.88 1 0.90859 1.066 0 125350000 67888000 57459000 9535 1774;1029;1128 3620 3716 14965 14965 ERPPEEVAAR 10 0 2 Unmodified _ERPPEEVAAR_ 0 0 1 B4DS66;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;Q05DN3 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 385.2032 3 385.203522 1152.58874 93512.93 -0.23218 -8.9437E-05 -0.0078383 -3.0193E-06 -0.24002 -9.2456E-05 385.203586449455 391.875699953845 19.179 0.24702 19.179 19.089 19.336 0 30 8 6 0 0 0 0.00048982 1 5689 59.013 46.85 1 0.88312 1.0014 0 33187000 17371000 15817000 9536 1774;1029;1128 3620 3716 14966 14966 ERPPFIPEGVVAR 13 0 2 Unmodified _ERPPFIPEGVVAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.2802 3 489.608659 1465.80415 85534.73 0.42683 0.00020898 -1.2171 -0.00059589 -0.79024 -0.00038691 489.608540672924 496.279865567203 80.118 1.2494 80.118 79.688 80.937 0 507 106 6 0 0 0 0.00097958 1 47438 39.509 32.628 1 1.2697 1.3846 0 127600000 54489000 73110000 9537 1183 3621 3717 14967 14967 ERPPFIPEGVVAR 13 0 2 Unmodified _ERPPFIPEGVVAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.9184 2 733.90935 1465.80415 68617.11 0.8703 0.00063872 0.22047 0.0001618 1.0908 0.00080053 733.909463701884 743.917709533479 80.117 1.2713 80.117 79.666 80.937 0 565 108 6 0 0 0 0.00083908 3 47449 85.845 49.901 1 1.1393 1.243 0 151720000 69767000 81954000 9538 1183 3621 3717 14968;14969;14970 14969 ERPPFIPEGVVAR 13 0 2 Unmodified _ERPPFIPEGVVAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.2811 3 489.608659 1465.80415 81666.94 0.078555 3.8461E-05 -1.1537 -0.00056488 -1.0752 -0.00052642 489.608567772754 496.279900860066 78.51 1.1179 78.51 78.08 79.198 0 466 96 8 0 0 0 3.6262E-05 2 47471 73.877 63.232 1 1.2488 1.4736 0 156840000 62018000 94820000 9539 1183 3621 3717 14971;14972 14971 ERPPFIPEGVVAR 13 0 2 Unmodified _ERPPFIPEGVVAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.9186 2 733.90935 1465.80415 68510.03 0.46155 0.00033874 0.19753 0.00014497 0.65908 0.0004837 733.909332544619 743.917736006284 78.482 0.92364 78.482 78.048 78.972 7.6294E-06 513 80 9 0 0 0 5.1838E-05 1 47592 100.55 72.541 1 1.1048 1.3147 0 218330000 103800000 114530000 9540 1183 3621 3717 14973 14973 ERPPFIPEGVVAR 13 0 2 Unmodified _ERPPFIPEGVVAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.2807 3 489.608659 1465.80415 84838.46 0.36118 0.00017684 0.029741 1.4561E-05 0.39092 0.0001914 489.608574782225 496.280862866633 90.688 1.0542 90.688 90.222 91.277 0 375 64 10 0 0 0 0.013356 2 50138 24.951 24.951 1 1.4103 1.1597 0 27981000 11325000 16655000 9541 1183 3621 3717 14974;14975 14974 ERPPFIPEGVVAR 13 0 2 Unmodified _ERPPFIPEGVVAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.9184 2 733.90935 1465.80415 70518.49 0.82163 0.000603 0.061567 4.5185E-05 0.8832 0.00064819 733.909499497852 743.917652741437 90.662 1.0323 90.662 90.244 91.277 0 372 62 10 0 0 0 0.001751 1 50287 64.439 38.5 1 1.5508 1.2548 0 52106000 19643000 32463000 9542 1183 3621 3717 14976 14976 ERPPFIPEGVVAR 13 0 2 Unmodified _ERPPFIPEGVVAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 496.2804 3 489.608659 1465.80415 85798.48 0.074197 3.6327E-05 0.036558 1.7899E-05 0.11076 5.4227E-05 489.608456813226 496.280927906953 90.363 1.2962 90.363 89.722 91.018 0 421 80 9 0 0 0 0.048195 1 49143 17.701 5.7242 1 1.5067 1.3968 0 23093000 9320300 13773000 9543 1183 3621 3717 14977 14977 ERPPFIPEGVVAR 13 0 2 Unmodified _ERPPFIPEGVVAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 733.9099 2 733.90935 1465.80415 70416.6 0.51163 0.00037549 -0.13993 -0.00010269 0.37171 0.0002728 733.909097390113 743.917589047307 90.379 0.94109 90.379 89.993 90.934 0 380 58 9 0 0 0 0.00080942 1 49238 89.403 61.391 1 1.569 1.4675 0 41155000 15888000 25266000 9544 1183 3621 3717 14978 14978 ERPTPSLNNNCTTSEDSLVLYNR 23 0 2 Unmodified _ERPTPSLNNNCTTSEDSLVLYNR_ 0 0 1 P07814;V9GYZ6;Q3KQZ8;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.1 3 894.092562 2679.25586 NaN NaN NaN -0.092126 -8.2369E-05 NaN NaN NaN NaN 75.97 0.45673 75.97 75.709 76.166 0 0 0 0 1.7295E-09 2 44611 75.797 72.864 1 NaN NaN 0 9462400 0 9462400 9545 1454 3622 3718 14979;14980 14980 ERPTPSLNNNCTTSEDSLVLYNR 23 0 2 Unmodified _ERPTPSLNNNCTTSEDSLVLYNR_ 0 0 1 P07814;V9GYZ6;Q3KQZ8;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.7651 3 894.092562 2679.25586 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.867 1 74.867 74.367 75.367 0 0 0 0 0.022868 1 45088 31.27 28.056 1 9546 1454 3622 3718 14981 14981 ERPTPSLNNNCTTSEDSLVLYNR 23 0 2 Unmodified _ERPTPSLNNNCTTSEDSLVLYNR_ 0 0 1 P07814;V9GYZ6;Q3KQZ8;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.1 3 894.092562 2679.25586 65255.59 0.3525 0.00031516 0.29771 0.00026618 0.6502 0.00058134 894.427100761404 901.099457686643 86.777 0.40457 86.777 86.573 86.978 7.6294E-06 128 23 7 0 0 0 0.00018856 3 47619 35.94 35.94 1 1.2449 1.0785 0 4964900 2237600 2727300 9547 1454 3622 3718 14982;14983;14984 14984 ERPTPSLNNNCTTSEDSLVLYNR 23 0 2 Unmodified _ERPTPSLNNNCTTSEDSLVLYNR_ 0 0 1 P07814;V9GYZ6;Q3KQZ8;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 894.4271 3 894.092562 2679.25586 64263.8 0.20978 0.00018756 0.46201 0.00041308 0.67179 0.00060064 894.427326963921 901.099575235909 86.835 0.42979 86.835 86.603 87.033 0 150 28 8 0 0 0 0.0011626 1 46827 30.249 30.249 1 1.273 1.1527 0 4918300 2092300 2826000 9548 1454 3622 3718 14985 14985 ERTEEPMETEPK 12 1 1 Oxidation (M) _ERTEEPM(ox)ETEPK_ ERTEEPM(1)ETEPK ERTEEPM(108.35)ETEPK 0 1 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.3356 2 746.335221 1490.65589 69148.55 0.6044 0.00045108 -0.29582 -0.00022078 0.30858 0.0002303 746.335116011277 755.34636890084 15.871 0.45836 15.871 15.744 16.202 9.5367E-07 137 25 9 0 0 0 7.9463E-06 1 3362 108.35 108.35 1 0.84749 1.0173 0 62806000 34170000 28637000 9549 515 3623 3719 14986 14986 369 ERTEEPMETEPK 12 1 1 Unmodified _ERTEEPMETEPK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 747.3488 2 738.337763 1474.66097 68783.83 0.29622 0.00021871 0.31035 0.00022914 0.60657 0.00044786 738.839778465767 747.34930384491 22.498 0.36361 22.498 22.338 22.702 0 67 15 6 0 0 0 0.015775 1 6767 57.348 57.348 1 2.1184 1.813 0 2754800 954900 1799900 9550 515 3623 3720 14987 14987 ERTNEGVIEFR 11 0 2 Unmodified _ERTNEGVIEFR_ 0 0 1 V9HVZ0;A8K588;Q13247;Q59GY3 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.3443 2 675.34404 1348.67353 75935.4 0.44651 0.00030155 -1.0123 -0.00068362 -0.56575 -0.00038208 675.343366325678 685.352151574419 45.547 0.26493 45.547 45.439 45.704 0 69 22 6 0 0 0 0.04018 1 24521 52.579 41.749 1 1.3693 1.4841 0 25429000 10774000 14655000 9551 748 3624 3721 14988 14988 ERTNEGVIEFR 11 0 2 Unmodified _ERTNEGVIEFR_ 0 0 1 V9HVZ0;A8K588;Q13247;Q59GY3 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3442 2 675.34404 1348.67353 73597.39 1.4742 0.0009956 -0.79987 -0.00054019 0.67433 0.00045541 675.343466233049 685.351892945207 43.714 0.3761 43.714 43.553 43.929 3.8147E-06 111 28 6 0 0 0 0.00085259 1 23756 94.616 79.001 1 1.3163 1.5464 0 132150000 62359000 69795000 9552 748 3624 3721 14989 14989 ERTNEGVIEFR 11 0 2 Unmodified _ERTNEGVIEFR_ 0 0 1 V9HVZ0;A8K588;Q13247;Q59GY3 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.7565 3 450.565119 1348.67353 89049.55 1.01 0.00045508 -1.1162 -0.00050292 -0.10618 -4.7842E-05 450.564635586353 457.236547345126 43.711 0.43955 43.711 43.414 43.853 0 114 33 6 0 0 0 0.014131 1 23762 55.188 43.655 1 1.3877 1.612 0 85040000 40650000 44390000 9553 748 3624 3721 14990 14990 ERTNEGVIEFR 11 0 2 Unmodified _ERTNEGVIEFR_ 0 0 1 V9HVZ0;A8K588;Q13247;Q59GY3 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 457.2374 3 450.565119 1348.67353 89673.51 -0.17078 -7.6948E-05 -0.69328 -0.00031237 -0.86406 -0.00038932 450.565061076785 457.2369461464 51.798 0.68154 51.798 51.443 52.124 0 238 48 7 0 0 0 0.057436 1 24952 18.203 18.203 1 0.79828 0.72155 0 3029300 1729700 1299600 9554 748 3624 3721 14991 14991 ERVEAGDVIYIEANSGAVK 19 1 1 Unmodified _ERVEAGDVIYIEANSGAVK_ 0 0 1 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.3502 3 674.016371 2019.02728 73472.14 0.82953 0.00055912 -0.2041 -0.00013756 0.62544 0.00042155 674.350509567292 680.02372618899 91 0.61334 91 90.777 91.39 7.6294E-06 132 37 5 0 0 0 0.047414 1 50410 16.93 16.93 1 1.0364 0.87457 0 7728400 4104700 3623700 9555 1076 3625 3722 14992 14992 ERVEAGDVIYIEANSGAVK 19 1 1 Unmodified _ERVEAGDVIYIEANSGAVK_ 0 0 1 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.351 3 674.016371 2019.02728 73452.63 0.49997 0.00033698 -0.18516 -0.0001248 0.3148 0.00021218 674.350597011389 680.023465890402 90.8 0.58031 90.8 90.55 91.13 0 113 31 5 0 0 0 0.0037689 1 49475 28.325 28.325 1 0.92663 0.78353 0 10014000 5101100 4913300 9556 1076 3625 3722 14993 14993 ERVMEIVDADEK 12 1 1 Oxidation (M) _ERVM(ox)EIVDADEK_ ERVM(1)EIVDADEK ERVM(103.91)EIVDADEK 0 1 1 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.3593 2 725.348131 1448.68171 70976.7 1.4161 0.0010272 -0.44985 -0.0003263 0.96629 0.0007009 725.347899645742 734.359026908967 33.264 0.46365 33.264 33.052 33.516 0 252 44 7 0 0 0 1.6029E-05 2 16504 103.91 103.91 1 0.80303 0.9643 0 66700000 35079000 31621000 9557 2148 3626 3723 14994;14995 14995 1989 ERVMEIVDADEK 12 1 1 Oxidation (M) _ERVM(ox)EIVDADEK_ ERVM(1)EIVDADEK ERVM(90.91)EIVDADEK 0 1 1 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.3498 2 725.348131 1448.68171 70976.73 0.70434 0.0005109 0.011903 8.6336E-06 0.71625 0.00051953 725.348024307637 734.359530692638 33.739 0.56026 33.739 33.472 34.032 0 247 54 7 0 0 0 0.00015543 1 16896 90.913 90.913 1 0.88147 1.0598 0 81335000 38975000 42361000 9558 2148 3626 3723 14996 14996 1989 ERVMEIVDADEK 12 1 1 Oxidation (M) _ERVM(ox)EIVDADEK_ ERVM(1)EIVDADEK ERVM(103.44)EIVDADEK 0 1 1 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.358 2 725.348131 1448.68171 71016.95 0.66975 0.0004858 -0.58744 -0.0004261 0.08231 5.9703E-05 725.347705213498 734.359041933659 32.171 0.4046 32.171 31.957 32.362 0 220 39 8 0 0 0 1.6885E-05 1 15947 103.44 103.44 1 1.0195 1.1994 0 76457000 39093000 37364000 9559 2148 3626 3723 14997 14997 1989 ERVMEIVDADEK 12 1 1 Oxidation (M) _ERVM(ox)EIVDADEK_ ERVM(1)EIVDADEK ERVM(40.62)EIVDADEK 0 1 1 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.3488 2 725.348131 1448.68171 71130.71 0.43253 0.00031373 0.24526 0.0001779 0.67778 0.00049163 725.348071547959 734.359539002884 37.908 0.47149 37.908 37.684 38.155 0 232 39 8 0 0 0 0.015834 1 16686 40.616 40.616 1 0.71293 0.59793 0 6344700 3516000 2828700 9560 2148 3626 3723 14998 14998 1989 ERYPTFIDALR 11 0 2 Unmodified _ERYPTFIDALR_ 0 0 1 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.5864 3 460.91386 1379.71975 91085.34 0.85223 0.0003928 0.59789 0.00027558 1.4501 0.00066838 460.913991317069 467.586321359687 90.896 0.57314 90.896 90.546 91.119 0 87 47 4 0 0 0 0.011018 2 54814 42.031 42.031 1 0.97671 1.0866 0 9116600 5125200 3991400 9561 886 3627 3724 14999;15000 14999 ERYPTFIDALR 11 0 2 Unmodified _ERYPTFIDALR_ 0 0 1 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.9143 3 460.91386 1379.71975 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.664 1 89.664 89.164 90.164 7.6294E-06 0 0 0 0.0047427 1 54122 49.448 26.728 1 9562 886 3627 3724 15001 15001 ERYPTFIDALR 11 0 2 Unmodified _ERYPTFIDALR_ 0 0 1 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.5866 3 460.91386 1379.71975 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.053 1 90.053 89.553 90.553 0 0 0 0 0.0071083 1 54381 56.225 37.813 1 9563 886 3627 3724 15002 15002 ERYPTFIDALR 11 0 2 Unmodified _ERYPTFIDALR_ 0 0 1 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.9204 3 460.91386 1379.71975 103621.7 0.28148 0.00012974 1.0039 0.00046272 1.2854 0.00059245 460.914230966833 467.586769712589 88.158 0.36888 88.158 88.015 88.384 0 106 34 4 0 0 0 0.00054661 3 54374 69.451 69.451 1 1.0097 1.1042 0 19421000 10127000 9294700 9564 886 3627 3724 15003;15004;15005 15005 ERYPTFIDALR 11 0 2 Unmodified _ERYPTFIDALR_ 0 0 1 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8754 2 690.867151 1379.71975 72803.91 0.67682 0.00046759 -0.50174 -0.00034663 0.17508 0.00012096 690.867277302181 700.874740760783 88.157 0.63201 88.157 87.952 88.584 0 164 57 5 0 0 0 0.040251 1 54367 60.434 60.434 1 0.96275 1.1055 0 54122000 24738000 29385000 9565 886 3627 3724 15006 15006 ERYPTFIDALR 11 0 2 Unmodified _ERYPTFIDALR_ 0 0 1 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8754 2 690.867151 1379.71975 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.431 1 88.431 87.931 88.931 7.6294E-06 0 0 0 0.038451 1 54541 58.274 33.036 1 9566 886 3627 3724 15007 15007 ERYPTFIDALR 11 0 2 Unmodified _ERYPTFIDALR_ 0 0 1 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 467.9209 3 460.91386 1379.71975 90364.13 0.18304 8.4364E-05 0.74224 0.00034211 0.92527 0.00042647 460.914046627574 467.586583145732 101.66 0.53218 101.66 101.34 101.87 0 126 34 5 0 0 0 0.054989 1 57512 25.194 25.194 1 0.944 0.82892 0 4339700 2057400 2282300 9567 886 3627 3724 15008 15008 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR 33 0 2 Unmodified _ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR_ 0 0 1 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1083.2417 3 1082.90876 3245.70444 58989.12 0.13803 0.00014947 0.15148 0.00016404 0.28951 0.00031351 1083.57736965742 1089.91555903704 94.717 0.36855 94.717 94.539 94.907 0 133 32 6 0 0 0 1.2333E-12 4 57517 56.366 54.256 1 1.3457 1.4542 0 19943000 9811900 10131000 9568 1801 3628 3725 15009;15010;15011;15012 15012 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR 33 0 2 Unmodified _ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR_ 0 0 1 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1089.9141 3 1082.90876 3245.70444 59510.99 0.31644 0.00034267 0.12299 0.00013319 0.43942 0.00047586 1083.24312947824 1089.91540680133 93.981 0.40311 93.981 93.769 94.172 7.6294E-06 175 33 8 0 0 0 2.8873E-08 5 58332 47.537 45.454 1 1.4352 1.5976 0 24754000 9018100 15736000 9569 1801 3628 3725 15013;15014;15015;15016;15017 15014 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR 33 0 2 Unmodified _ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR_ 0 0 1 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1083.2416 3 1082.90876 3245.70444 59214.86 0.20406 0.00022098 0.21193 0.0002295 0.41599 0.00045048 1083.24292674889 1089.91532433191 107.95 0.36917 107.95 107.76 108.13 0 124 20 8 0 0 0 0.058617 2 61889 9.6067 9.6067 1 1.158 1.0137 0 4475300 1632000 2843300 9570 1801 3628 3725 15018;15019 15018 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR 33 0 2 Unmodified _ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR_ 0 0 1 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1089.9146 3 1082.90876 3245.70444 59752.45 0.097501 0.00010558 0.23734 0.00025702 0.33484 0.00036261 1083.57719023076 1089.91599649375 107.91 0.36223 107.91 107.71 108.08 7.6294E-06 107 17 11 0 0 0 0.0039963 3 60943 23.168 23.168 1 1.0294 0.93357 0 5539800 2815900 2723900 9571 1801 3628 3725 15020;15021;15022 15021 ESADGLQGETQLLVSR 16 0 1 Unmodified _ESADGLQGETQLLVSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.4351 2 851.933948 1701.85334 66630.55 0.89814 0.00076516 0.053224 4.5343E-05 0.95137 0.0008105 851.933900574502 856.938061133635 86.59 0.76331 86.59 86.335 87.098 0 361 54 8 0 0 0 0.00015628 2 52012 74.46 74.46 1 1.6888 1.9318 0 127990000 44374000 83621000 9572 1569 3629 3726 15023;15024 15023 ESADGLQGETQLLVSR 16 0 1 Unmodified _ESADGLQGETQLLVSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.9387 2 851.933948 1701.85334 66602.29 0.8342 0.00071069 0.053834 4.5863E-05 0.88804 0.00075655 851.933606118852 856.93796358983 85.851 0.88783 85.851 85.479 86.367 0 406 71 8 0 0 0 5.7823E-95 2 52867 221.86 221.86 1 1.8132 2.0691 0 143390000 51582000 91804000 9573 1569 3629 3726 15025;15026 15026 ESADGLQGETQLLVSR 16 0 1 Unmodified _ESADGLQGETQLLVSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 856.9394 2 851.933948 1701.85334 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.825 1 99.825 99.325 100.32 0 0 0 0 0.0071953 1 56486 49.243 39.29 1 9574 1569 3629 3726 15027 15027 ESADGLQGETQLLVSR 16 0 1 Unmodified _ESADGLQGETQLLVSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 856.9388 2 851.933948 1701.85334 65966.2 0.58136 0.00049528 0.046828 3.9894E-05 0.62819 0.00053517 851.934024468559 856.93813419928 99.381 0.96371 99.381 98.856 99.82 0 370 67 11 0 0 0 2.6748E-06 4 55537 91.62 88.299 1 3.5242 3.0763 0 97850000 20787000 77063000 9575 1569 3629 3726 15028;15029;15030;15031 15031 ESADPLGAWLQDAR 14 0 1 Unmodified _ESADPLGAWLQDAR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.8732 2 764.873162 1527.73177 74865.82 0.88202 0.00067463 -0.17841 -0.00013646 0.70361 0.00053818 764.873125983366 769.876785602663 112.82 0.49296 112.82 112.61 113.1 -7.6294E-06 99 36 5 0 0 0 0.001083 1 71311 56.225 50.502 1 0.99078 1.0088 0 7080500 2752400 4328100 9576 1754 3630 3727 15032 15032 ESALASADLEEEIHQK 16 1 0 Unmodified _ESALASADLEEEIHQK_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.4327 2 885.431238 1768.84792 65028.99 0.62743 0.00055555 0.27449 0.00024304 0.90192 0.00079859 885.431288132233 889.439376973606 69.115 0.57819 69.115 68.836 69.415 0 193 50 5 0 0 0 5.4106E-07 2 40121 98.407 98.407 1 0.79728 0.78457 0 23931000 11826000 12105000 9577 1566 3631 3728 15033;15034 15034 ESALASADLEEEIHQK 16 1 0 Unmodified _ESALASADLEEEIHQK_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.4324 2 885.431238 1768.84792 65155.69 0.40775 0.00036104 0.54124 0.00047923 0.949 0.00084027 885.431456071621 889.43972098943 67.795 0.56316 67.795 67.579 68.142 0 184 48 6 0 0 0 0.00024471 2 40410 57.802 57.802 1 0.94367 0.95304 0 26818000 12838000 13979000 9578 1566 3631 3728 15035;15036 15036 ESALASADLEEEIHQK 16 1 0 Unmodified _ESALASADLEEEIHQK_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 885.4318 2 885.431238 1768.84792 65225.71 0.43274 0.00038316 -0.41466 -0.00036715 0.018082 1.6011E-05 885.931722137433 889.438433027887 79.39 0.63007 79.39 79.071 79.701 0 187 33 9 0 0 0 0.0023254 2 42710 41.383 35.998 1 0.89324 0.71169 0 9775500 4808700 4966800 9579 1566 3631 3728 15037;15038 15037 ESALASADLEEEIHQK 16 1 0 Unmodified _ESALASADLEEEIHQK_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 889.4383 2 885.431238 1768.84792 64199.47 0.12872 0.00011398 0.084511 7.4828E-05 0.21323 0.0001888 885.931930779904 889.438546028268 79.597 0.76127 79.597 79.088 79.849 0 226 46 9 0 0 0 3.8065E-06 2 41985 88.021 88.021 1 0.93613 0.76953 0 9829800 5387000 4442800 9580 1566 3631 3728 15039;15040 15039 ESAQAIEDLAGFK 13 1 0 Unmodified _ESAQAIEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.8526 2 689.846081 1377.67761 72826.38 0.85857 0.00059228 0.029559 2.0391E-05 0.88813 0.00061267 689.846103209779 693.853139697606 93.939 1.2623 93.939 93.558 94.821 -7.6294E-06 506 89 8 0 0 0 5.0484E-06 2 56834 128.01 128.01 1 2.1357 2.481 0 249050000 85595000 163460000 9581 1569 3632 3729 15041;15042 15041 ESAQAIEDLAGFK 13 1 0 Unmodified _ESAQAIEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.8519 2 689.846081 1377.67761 72401.88 0.75982 0.00052416 -0.097982 -6.7593E-05 0.66183 0.00045656 689.846069533875 693.85300822028 93.233 1.1201 93.233 92.705 93.825 0 583 98 8 0 0 0 9.2996E-09 1 57595 136.48 136.48 1 2.0773 2.4141 0 231660000 79963000 151690000 9582 1569 3632 3729 15043 15043 ESAQAIEDLAGFK 13 1 0 Unmodified _ESAQAIEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.8461 2 689.846081 1377.67761 72760.32 0.61673 0.00042545 -0.067427 -4.6514E-05 0.5493 0.00037893 689.846013309703 693.853037282371 107.58 0.89982 107.58 107.23 108.13 0 270 51 8 0 0 0 0.00024925 2 61556 68.107 68.107 1 3.7969 3.1523 0 45926000 9550300 36376000 9583 1569 3632 3729 15044;15045 15045 ESAQAIEDLAGFK 13 1 0 Unmodified _ESAQAIEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.8474 2 689.846081 1377.67761 72111.13 0.55141 0.00038039 -0.017283 -1.1922E-05 0.53413 0.00036847 689.846078415159 693.853070503886 107.48 0.97769 107.48 107.15 108.12 7.6294E-06 329 59 8 0 0 0 0.041081 2 60579 42.802 38.785 1 3.8981 3.2595 0 44288000 8958700 35329000 9584 1569 3632 3729 15046;15047 15047 ESAQAIEDLAGFKDPAAGHTEESMTDDK 28 2 0 Oxidation (M) _ESAQAIEDLAGFKDPAAGHTEESM(ox)TDDK_ ESAQAIEDLAGFKDPAAGHTEESM(1)TDDK ESAQAIEDLAGFKDPAAGHTEESM(43.94)TDDK 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 999.4546 3 993.776856 2978.30874 NaN NaN NaN 0.34346 0.00034132 NaN NaN NaN NaN 76.681 0.42188 76.681 76.471 76.893 0 0 0 0 2.8877E-06 1 46296 43.936 39.177 1 NaN NaN 0 10469000 0 10469000 9585 1569 3633 3730 15048 15048 1334 ESAQAIEDLAGFKDPAAGHTEESMTDDK 28 2 0 Unmodified _ESAQAIEDLAGFKDPAAGHTEESMTDDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 745.8436 4 741.585733 2962.31383 67198.09 1.0172 0.00075436 -0.01023 -7.5867E-06 1.007 0.00074677 742.087139558841 745.843301258646 96.471 0.47833 96.471 96.228 96.707 0 95 29 5 0 0 0 0.054388 1 54073 7.7651 5.5417 1 3.3696 2.9053 0 5482700 858540 4624200 9586 1569 3633 3731 15049 15049 ESCDQILDSYK 11 1 0 Unmodified _ESCDQILDSYK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3008 2 679.300649 1356.58675 75015.05 0.96332 0.00065438 0.80587 0.00054743 1.7692 0.0012018 679.301024350807 683.308649000838 59.442 0.20195 59.442 59.274 59.476 -3.8147E-06 52 14 5 0 0 0 0.00038376 1 33859 82.749 74.824 1 1.1474 1.1244 0 21267000 9305400 11961000 9587 1795 3634 3732 15050 15050 ESCDQILDSYK 11 1 0 Unmodified _ESCDQILDSYK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3042 2 679.300649 1356.58675 NaN NaN NaN 2.7103 0.0018411 NaN NaN NaN NaN 58.28 0.16082 58.28 58.213 58.374 0 0 0 0 0.0016819 1 33878 81.525 64.13 1 NaN NaN 0 11253000 11253000 0 9588 1795 3634 3732 15051 15051 ESDLPSAILQTSGVSEFTK 19 1 0 Unmodified _ESDLPSAILQTSGVSEFTK_ 0 0 0 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1005.0066 2 1005.00731 2008.00007 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.18 1 116.18 115.68 116.68 7.6294E-06 0 0 0 0.00043489 1 74123 57.136 43.473 1 9589 957 3635 3733 15052 15052 ESDLPSAILQTSGVSEFTK 19 1 0 Unmodified _ESDLPSAILQTSGVSEFTK_ 0 0 0 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1009.018 2 1005.00731 2008.00007 62603.63 0.3782 0.00038009 -0.085172 -8.5599E-05 0.29303 0.00029449 1005.00706472257 1009.01447384512 127.65 0.39571 127.65 127.47 127.87 0 71 15 7 0 0 0 0.00026378 2 76044 44.925 36.412 1 0.98748 0.77153 0 2220800 1075700 1145100 9590 957 3635 3733 15053;15054 15053 ESDVVQELLK 10 1 0 Unmodified _ESDVVQELLK_ 0 0 0 A0A024R8V6;Q9P275;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.3213 2 580.313886 1158.61322 NaN NaN NaN -1.494 -0.00086699 NaN NaN NaN NaN 94.862 0.60364 94.862 94.597 95.201 0 0 0 0 0.0016847 1 57739 84.615 63.643 1 NaN NaN 0 12399000 0 12399000 9591 260 3636 3734 15055 15055 ESDVVQELLK 10 1 0 Unmodified _ESDVVQELLK_ 0 0 0 A0A024R8V6;Q9P275;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3218 2 580.313886 1158.61322 NaN NaN NaN -1.9233 -0.0011161 NaN NaN NaN NaN 93.996 0.97279 93.996 93.39 94.363 -7.6294E-06 0 0 0 1.1229E-07 1 58340 109.29 86.55 1 NaN NaN 0 24673000 0 24673000 9592 260 3636 3734 15056 15056 ESDWDGIIACHQGK 14 1 0 Unmodified _ESDWDGIIACHQGK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.5782 3 539.243828 1614.70965 83263.97 0.42314 0.00022818 -0.28338 -0.00015281 0.13976 7.5364E-05 539.577994713137 541.914954219871 62.773 0.42404 62.773 62.542 62.966 3.8147E-06 120 40 5 0 0 0 0.0024496 1 36078 39.509 39.509 1 0.89094 0.94491 0 16153000 7741200 8412000 9593 486 3637 3735 15057 15057 ESDWDGIIACHQGK 14 1 0 Unmodified _ESDWDGIIACHQGK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.2495 3 539.243828 1614.70965 85763.52 0.45682 0.00024634 -0.36204 -0.00019523 0.094773 5.1106E-05 539.244098770109 541.915063602233 72.082 0.76409 72.082 71.881 72.645 0 177 61 6 0 0 0 0.048663 1 37985 12.285 8.1835 1 1.3888 1.101 0 4254700 2422000 1832700 9594 486 3637 3735 15058 15058 ESDWDGIIACHQGK 14 1 0 Unmodified _ESDWDGIIACHQGK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.249 3 539.243828 1614.70965 83784.3 0.35391 0.00019085 -0.29212 -0.00015752 0.061795 3.3322E-05 539.243643649279 541.915227732098 72.524 0.7997 72.524 72.339 73.138 0 242 68 5 0 0 0 0.059864 1 37466 11.439 11.336 1 1.3019 1.0249 0 3867400 1569000 2298400 9595 486 3637 3735 15059 15059 ESDWDGIIACHQGK 14 1 0 Unmodified _ESDWDGIIACHQGK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 812.3693 2 808.362104 1614.70965 68264.98 0.35693 0.00028853 0.15058 0.00012173 0.50751 0.00041025 808.863757085197 812.870876085231 72.582 0.58494 72.582 72.38 72.965 0 117 49 5 0 0 0 0.0041327 1 37510 45.972 45.972 1 1.1861 0.9224 0 2142900 839520 1303300 9596 486 3637 3735 15060 15060 ESEDFIVEQYK 11 1 0 Unmodified _ESEDFIVEQYK_ 0 0 0 Q14566;Q4ZG57;B4DRF6 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8327 2 693.824815 1385.63508 NaN NaN NaN -0.15424 -0.00010701 NaN NaN NaN NaN 73.247 0.63601 73.247 72.965 73.601 0 0 0 0 5.7494E-16 1 43987 132.01 79.074 1 NaN NaN 0 11758000 0 11758000 9597 1734 3638 3736 15061 15061 ESEDFIVEQYK 11 1 0 Unmodified _ESEDFIVEQYK_ 0 0 0 Q14566;Q4ZG57;B4DRF6 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.8243 2 693.824815 1385.63508 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.212 1 73.212 72.712 73.712 0 0 0 0 0.0063855 1 43957 63.426 49.424 1 9598 1734 3638 3736 15062 15062 ESEDFIVEQYK 11 1 0 Unmodified _ESEDFIVEQYK_ 0 0 0 Q14566;Q4ZG57;B4DRF6 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.8256 2 693.824815 1385.63508 NaN NaN NaN 0.052422 3.6372E-05 NaN NaN NaN NaN 85.079 0.39584 85.079 84.879 85.275 0 0 0 0 0.021177 1 45704 52.79 34.01 1 NaN NaN 0 1036400 1036400 0 9599 1734 3638 3736 15063 15063 ESEDKPEIEDVGSDEEEEK 19 2 0 Unmodified _ESEDKPEIEDVGSDEEEEK_ 0 0 1 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.989 3 731.644885 2191.91283 71053.58 0.78924 0.00057745 -0.23613 -0.00017276 0.55311 0.00040468 731.979102320014 737.321844279627 39.183 0.54119 39.183 38.92 39.461 0 194 42 8 0 0 0 1.3462E-05 3 20138 56.719 56.719 1 4.7167 5.5691 0 39555000 5064300 34490000 9600 1348 3639 3737 15064;15065;15066 15064 ESEDKPEIEDVGSDEEEEK 19 2 0 Unmodified _ESEDKPEIEDVGSDEEEEK_ 0 0 1 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.9874 3 731.644885 2191.91283 70773.75 0.5148 0.00037665 -0.040361 -2.953E-05 0.47443 0.00034712 731.979179036084 736.987729036508 38.258 0.55317 38.258 37.958 38.511 0 165 43 6 0 0 0 3.1349E-12 2 19917 102.89 102.89 1 6.3077 7.2977 0 41446000 6354000 35092000 9601 1348 3639 3737 15067;15068 15067 ESEDKPEIEDVGSDEEEEK 19 2 0 Unmodified _ESEDKPEIEDVGSDEEEEK_ 0 0 1 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1104.9791 2 1096.96369 2191.91283 NaN NaN NaN 0.13004 0.00014265 NaN NaN NaN NaN 38.286 0.17495 38.286 38.166 38.34 0 0 0 0 0.018854 1 20041 51.546 48.837 1 NaN NaN 0 10799000 0 10799000 9602 1348 3639 3737 15069 15069 ESEDKPEIEDVGSDEEEEKK 20 3 0 Unmodified _ESEDKPEIEDVGSDEEEEKK_ 0 0 2 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.6904 3 774.343206 2320.00779 NaN NaN NaN -0.23487 -0.00018187 NaN NaN NaN NaN 30.096 0.1105 30.096 30.055 30.166 0 0 0 0 5.9786E-14 1 14679 98.175 92.506 1 NaN NaN 0 4173300 0 4173300 9603 1348 3640 3738 15070 15070 ESEDKPEIEDVGSDEEEEKK 20 3 0 Unmodified _ESEDKPEIEDVGSDEEEEKK_ 0 0 2 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.6923 3 774.343206 2320.00779 NaN NaN NaN -0.2762 -0.00021388 NaN NaN NaN NaN 29.345 0.17116 29.345 29.24 29.411 0 0 0 0 2.853E-05 2 14189 59.342 52.066 1 NaN NaN 0 4550900 0 4550900 9604 1348 3640 3738 15071;15072 15072 ESEEAILADDDEPCK 15 1 0 Unmodified _ESEEAILADDDEPCK_ 0 0 0 Q96T23;H0YCN2;H0YEX0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 860.8647 2 860.864539 1719.71453 NaN NaN NaN -0.35818 -0.00030835 NaN NaN NaN NaN 58.119 0.47578 58.119 57.924 58.399 -3.8147E-06 0 0 0 0.00044622 1 32857 72.652 69.533 1 NaN NaN 0 3697900 3697900 0 9605 1991 3641 3739 15073 15073 ESEEAILADDDEPCK 15 1 0 Unmodified _ESEEAILADDDEPCK_ 0 0 0 Q96T23;H0YCN2;H0YEX0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.8705 2 860.864539 1719.71453 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.073 1 58.073 57.573 58.573 -3.8147E-06 0 0 0 0.0015562 1 32893 67.385 57.73 1 9606 1991 3641 3739 15074 15074 ESEEAILADDDEPCK 15 1 0 Unmodified _ESEEAILADDDEPCK_ 0 0 0 Q96T23;H0YCN2;H0YEX0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 864.8718 2 860.864539 1719.71453 NaN NaN NaN 0.096854 8.3378E-05 NaN NaN NaN NaN 57.127 0.13078 57.127 57.04 57.171 0 0 0 0 0.00055323 1 32990 70.488 61.056 1 NaN NaN 0 2253200 0 2253200 9607 1991 3641 3739 15075 15075 ESEFDDEPK 9 1 0 Unmodified _ESEFDDEPK_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.228 2 548.227476 1094.4404 81753.66 0.42479 0.00023288 -0.084657 -4.6411E-05 0.34013 0.00018647 548.22728299837 552.234517198098 26.687 0.57441 26.687 26.403 26.978 0 174 35 8 0 0 0 1.2126E-05 2 11968 124.98 115.07 1 1.141 1.2868 0 77139000 36554000 40584000 9608 2128 3642 3740 15076;15077 15077 ESEFDDEPK 9 1 0 Unmodified _ESEFDDEPK_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.2277 2 548.227476 1094.4404 82454.69 0.2278 0.00012489 0.16545 9.0706E-05 0.39326 0.00021559 548.227537749956 552.234524690384 26.307 0.39802 26.307 26.105 26.503 -1.9073E-06 81 21 5 0 0 0 0.00025784 2 11775 104.44 96.869 1 1.1168 1.2098 0 22112000 11334000 10778000 9609 2128 3642 3740 15078;15079 15079 ESEFDDEPK 9 1 0 Unmodified _ESEFDDEPK_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.2343 2 548.227476 1094.4404 82179.89 0.31367 0.00017196 -0.061599 -3.377E-05 0.25207 0.00013819 548.227321291102 552.234428610824 30.077 0.56216 30.077 29.814 30.376 0 174 38 6 0 0 0 0.0011206 2 12324 89.698 87.019 1 1.294 1.0228 0 6115200 2470800 3644400 9610 2128 3642 3740 15080;15081 15080 ESEGEEEDEDEDLSK 15 1 0 Unmodified _ESEGEEEDEDEDLSK_ 0 0 0 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.8414 2 870.334323 1738.65409 66333.18 0.32788 0.00028536 0.29933 0.00026052 0.62721 0.00054588 870.836209782053 874.341601267081 24.649 0.41128 24.649 24.42 24.831 0 68 16 7 0 0 0 3.9078E-15 3 10327 128.85 127.26 1 1.2389 1.2927 0 12224000 5541900 6681900 9611 1420 3643 3741 15082;15083;15084 15084 ESEGEEEDEDEDLSK 15 1 0 Unmodified _ESEGEEEDEDEDLSK_ 0 0 0 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.3358 2 870.334323 1738.65409 65597.5 0.38953 0.00033902 0.10869 9.4593E-05 0.49822 0.00043361 870.835718156804 874.341170703024 24.38 0.35583 24.38 24.196 24.552 0 73 15 7 0 0 0 4.6265E-15 3 10094 127.17 127.07 1 1.1634 1.1623 0 14142000 6175000 7966500 9612 1420 3643 3741 15085;15086;15087 15087 ESEGEEEDEDEDLSK 15 1 0 Unmodified _ESEGEEEDEDEDLSK_ 0 0 0 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 874.8431 2 870.334323 1738.65409 66334.59 0.41306 0.0003595 0.26146 0.00022755 0.67452 0.00058706 870.334687931789 874.341787138776 28.192 0.36582 28.192 28.016 28.382 0 91 18 7 0 0 0 0.013642 2 11202 33.685 33.685 1 0.57459 0.46673 0 2706600 1469000 1237600 9613 1420 3643 3741 15088;15089 15089 ESEIIDFFLGASLK 14 1 0 Unmodified _ESEIIDFFLGASLK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;Q8J014;E9PMM9;E9PQD7;I3L404;E9PPT0;Q8NI61;D3DU83;H3BNG3 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.915 2 784.913964 1567.81338 69169.18 0.5155 0.00040462 0.71881 0.0005642 1.2343 0.00096882 784.91463788688 788.921725779603 133.57 0.25275 133.57 133.39 133.64 0 12 2 6 0 0 0 0.029789 1 87611 31.185 31.185 1 1.1833 1.3215 0 62809000 28255000 34554000 9614 1485 3644 3742 15090 15090 ESEIIDFFLGASLK 14 1 0 Unmodified _ESEIIDFFLGASLK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;Q8J014;E9PMM9;E9PQD7;I3L404;E9PPT0;Q8NI61;D3DU83;H3BNG3 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.9154 2 784.913964 1567.81338 68856.59 0.71819 0.00056372 0.4332 0.00034003 1.1514 0.00090375 784.914228374227 788.921481809755 133.55 0.22647 133.55 133.4 133.63 0 19 4 8 0 0 0 0.00010451 2 89828 84.479 84.479 1 1.0619 1.1825 0 51437000 24172000 27265000 9615 1485 3644 3742 15091;15092 15092 ESEITDEDIDGILER 15 0 1 Unmodified _ESEITDEDIDGILER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.4097 2 867.407428 1732.8003 64893.15 0.74528 0.00064646 0.0801 6.9479E-05 0.82538 0.00071594 867.407363690787 872.411655533898 101.53 1.0871 101.53 101.06 102.15 0 436 85 7 0 0 0 6.8231E-31 2 62367 160.15 160.15 1 2.3421 2.7153 0 171380000 48678000 122700000 9616 1391 3645 3743 15093;15094 15094 ESEITDEDIDGILER 15 0 1 Unmodified _ESEITDEDIDGILER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.4128 2 867.407428 1732.8003 64727.95 0.55673 0.00048291 0.16822 0.00014592 0.72495 0.00062883 867.407449522127 872.411719240688 101.03 1.2264 101.03 100.48 101.71 -7.6294E-06 479 96 7 0 0 0 1.0033E-10 1 63313 122.7 122.7 1 2.3741 2.7199 0 170990000 56409000 114580000 9617 1391 3645 3743 15095 15095 ESEITDEDIDGILER 15 0 1 Unmodified _ESEITDEDIDGILER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 872.413 2 867.407428 1732.8003 64962.12 0.94583 0.00082042 0.23611 0.00020481 1.1819 0.0010252 867.407760435992 872.411929147634 113.92 0.9375 113.92 113.58 114.51 0 283 41 11 0 0 0 1.28E-07 2 66343 110.08 106.01 1 5.1283 4.4311 0 101110000 17198000 83912000 9618 1391 3645 3743 15096;15097 15096 ESEITDEDIDGILER 15 0 1 Unmodified _ESEITDEDIDGILER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 872.4103 2 867.407428 1732.8003 64649.95 0.41619 0.00036101 -0.64994 -0.00056376 -0.23375 -0.00020276 867.407875447967 872.411039303583 114.26 0.67226 114.26 113.71 114.38 0 125 28 5 0 0 0 5.0801E-15 1 65752 126.12 126.12 1 4.8902 4.2659 0 25486000 4503800 20982000 9619 1391 3645 3743 15098 15098 ESEITDEDIDGILER 15 0 1 Unmodified _ESEITDEDIDGILER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 872.4124 2 867.407428 1732.8003 NaN NaN NaN -0.70403 -0.00061068 NaN NaN NaN NaN 114.52 0.97467 114.52 114.35 115.33 -7.6294E-06 0 0 0 1.1024E-16 1 66393 117.23 107.8 1 NaN NaN 0 14967000 0 14967000 9620 1391 3645 3743 15099 15099 ESELGDRPLQVGER 14 0 2 Unmodified _ESELGDRPLQVGER_ 0 0 1 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.6097 3 528.937393 1583.79035 83651.21 0.11838 6.2613E-05 0.25878 0.00013688 0.37715 0.00019949 529.272228505566 535.609608109633 45.691 0.55117 45.691 45.379 45.931 3.8147E-06 213 47 7 0 0 0 0.0039478 1 24482 38.511 31.146 1 0.83625 0.90837 0 34978000 20496000 14482000 9621 684 3646 3744 15100 15100 ESELGDRPLQVGER 14 0 2 Unmodified _ESELGDRPLQVGER_ 0 0 1 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.9371 3 528.937393 1583.79035 82312.71 0.66853 0.00035361 -0.12539 -6.6322E-05 0.54314 0.00028729 528.937325406858 535.609485815297 44.377 0.46122 44.377 44.151 44.612 0 156 40 5 0 0 0 3.7925E-05 2 24217 78.505 78.505 1 0.98615 1.1293 0 48729000 24363000 24366000 9622 684 3646 3744 15101;15102 15102 ESESEDSSDDEPLIK 15 1 0 Unmodified _ESESEDSSDDEPLIK_ 0 0 0 B4DNW3;H0Y993;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK Protein DEK ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.8704 2 840.360144 1678.70573 NaN NaN NaN -0.078838 -6.6252E-05 NaN NaN NaN NaN 46.466 0.51451 46.466 46.201 46.716 0 0 0 0 0.00052375 1 24948 71.085 67.66 1 NaN NaN 0 9579600 0 9579600 9623 1546;1018 3647 3745 15103 15103 ESESEDSSDDEPLIK 15 1 0 Unmodified _ESESEDSSDDEPLIK_ 0 0 0 B4DNW3;H0Y993;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.3683 2 840.360144 1678.70573 67484.39 0.77244 0.00064912 0.099799 8.3867E-05 0.87223 0.00073299 840.86205430073 844.367053549106 45.614 0.50407 45.614 45.31 45.814 -3.8147E-06 118 43 5 0 0 0 0.00021022 1 24900 75.819 73.306 1 2.2097 2.2906 0 11279000 4596000 6682700 9624 1546;1018 3647 3745 15104 15104 ESESESDETPPAAPQLIK 18 1 0 Unmodified _ESESESDETPPAAPQLIK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 968.4686 2 964.460192 1926.90583 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.868 1 73.868 73.368 74.368 0 0 0 0 0.00017559 1 43327 65.563 58.516 1 9625 1398 3648 3746 15105 15105 ESESESDETPPAAPQLIK 18 1 0 Unmodified _ESESESDETPPAAPQLIK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 964.4609 2 964.460192 1926.90583 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.168 1 74.168 73.668 74.668 0 0 0 0 1.3995E-05 1 43507 77.597 59.461 1 9626 1398 3648 3746 15106 15106 ESESESDETPPAAPQLIK 18 1 0 Unmodified _ESESESDETPPAAPQLIK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 968.4673 2 964.460192 1926.90583 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.856 1 72.856 72.356 73.356 0 0 0 0 0.049983 1 43727 36.284 30.561 1 9627 1398 3648 3746 15107 15107 ESESESDETPPAAPQLIK 18 1 0 Unmodified _ESESESDETPPAAPQLIK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 964.4603 2 964.460192 1926.90583 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.926 1 72.926 72.426 73.426 0 0 0 0 1.5705E-06 1 43772 85.522 63.89 1 9628 1398 3648 3746 15108 15108 ESFADVLPEAAALVK 15 1 0 Unmodified _ESFADVLPEAAALVK_ 0 0 0 Q5VT52 Q5VT52 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.4257 2 780.419413 1558.82427 72913.13 0.77614 0.00060572 0.32448 0.00025323 1.1006 0.00085895 780.419598895219 784.426484391307 124.46 0.36832 124.46 124.27 124.64 0 79 24 6 0 0 0 0.0018082 1 80786 46.706 46.706 1 1.5282 1.6068 0 3867500 1610000 2257500 9629 1830 3649 3747 15109 15109 ESFADVLPEAAALVK 15 1 0 Unmodified _ESFADVLPEAAALVK_ 0 0 0 Q5VT52 Q5VT52 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.4279 2 780.419413 1558.82427 69190.41 0.97322 0.00075952 0.63469 0.00049532 1.6079 0.0012548 780.921940003209 784.426720019407 124.08 0.3058 124.08 123.93 124.24 0 58 20 5 0 0 0 0.019372 1 82455 31.478 25.037 1 1.1417 1.211 0 4127600 1076200 3051400 9630 1830 3649 3747 15110 15110 ESFDGSVR 8 0 1 Unmodified _ESFDGSVR_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.7106 2 448.709057 895.40356 89822.87 0.39956 0.00017929 0.66669 0.00029915 1.0662 0.00047844 448.709331989354 453.713350585214 26.052 0.70536 26.052 25.763 26.469 0 180 41 8 0 0 0 0.0019394 2 11498 104.37 57.702 1 1.0928 1.2902 0 249710000 111500000 138210000 9631 151 3650 3748 15111;15112 15111 ESFDGSVR 8 0 1 Unmodified _ESFDGSVR_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.7101 2 448.709057 895.40356 92203.9 0.017543 7.8718E-06 0.47733 0.00021418 0.49487 0.00022205 448.709135677694 453.713421592638 25.754 0.28875 25.754 25.628 25.916 0 51 21 4 0 0 0 0.029249 1 11319 52.716 19.358 1 0.88874 0.87809 0 15054000 8104400 6949500 9632 151 3650 3748 15113 15113 ESFDGSVR 8 0 1 Unmodified _ESFDGSVR_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.7089 2 448.709057 895.40356 89278.14 -0.028611 -1.2838E-05 -0.1756 -7.8795E-05 -0.20421 -9.1633E-05 448.708815956684 453.713052241197 29.084 0.49732 29.084 28.819 29.316 -1.9073E-06 180 40 6 0 0 0 0.014493 1 11772 62.88 21.378 1 0.55288 0.46839 0 9353600 5888700 3464900 9633 151 3650 3748 15114 15114 ESFETFINK 9 1 0 Unmodified _ESFETFINK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.7748 2 557.774396 1113.53424 83054.58 0.49111 0.00027393 -0.039647 -2.2114E-05 0.45146 0.00025181 557.774295386632 561.781414005002 76.847 0.85808 76.847 76.432 77.29 7.6294E-06 319 73 6 0 0 0 0.00017767 2 45297 107.29 74.685 1 0.74095 0.7314 0 25190000 14681000 10509000 9634 1718 3651 3749 15115;15116 15116 ESFETFINK 9 1 0 Unmodified _ESFETFINK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.7823 2 557.774396 1113.53424 82809.83 0.48354 0.00026971 0.073213 4.0837E-05 0.55676 0.00031054 557.774281282481 561.781446638789 75.888 0.85155 75.888 75.367 76.219 0 327 78 6 0 0 0 0.0035584 1 45702 71.491 54.095 1 0.7452 0.79016 0 35935000 22930000 13005000 9635 1718 3651 3749 15117 15117 ESFETFINK 9 1 0 Unmodified _ESFETFINK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.7738 2 557.774396 1113.53424 82086.33 0.5612 0.00031302 0.094862 5.2911E-05 0.65606 0.00036593 557.774205978145 561.781329161136 87.649 0.79903 87.649 87.322 88.121 0 240 47 7 0 0 0 0.021548 2 47375 49.418 38.708 1 0.93139 0.75769 0 7085400 3801400 3284000 9636 1718 3651 3749 15118;15119 15119 ESFLVTGSQDCTVK 14 1 0 Unmodified _ESFLVTGSQDCTVK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.8823 2 785.874513 1569.73447 68504.47 0.58252 0.00045779 -0.24292 -0.0001909 0.3396 0.00026689 785.874605241289 789.881711922714 68.296 0.65639 68.296 68.014 68.671 0 328 58 8 0 0 0 9.5449E-05 2 39460 86.014 86.014 1 0.80397 0.88135 0 52790000 30728000 22062000 9637 1698;436 3652 3750 15120;15121 15120 ESFLVTGSQDCTVK 14 1 0 Unmodified _ESFLVTGSQDCTVK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.882 2 785.874513 1569.73447 68274.83 0.65216 0.00051251 -0.28747 -0.00022592 0.36468 0.0002866 785.874541962902 789.88157927854 67.129 0.60483 67.129 66.891 67.496 7.6294E-06 307 50 8 0 0 0 3.5239E-22 3 39636 149.96 143.72 1 0.80511 0.90706 0 59370000 32745000 26625000 9638 1698;436 3652 3750 15122;15123;15124 15122 ESFLVTGSQDCTVK 14 1 0 Unmodified _ESFLVTGSQDCTVK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.8828 2 785.874513 1569.73447 68015.37 0.51247 0.00040274 -0.24861 -0.00019537 0.26386 0.00020736 785.87464023721 789.88180807978 78.061 0.90697 78.061 77.596 78.503 0 335 59 10 0 0 0 0.00021373 2 41749 67.385 67.385 1 1.1747 0.95184 0 24616000 11323000 13293000 9639 1698;436 3652 3750 15125;15126 15125 ESFLVTGSQDCTVK 14 1 0 Unmodified _ESFLVTGSQDCTVK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.8814 2 785.874513 1569.73447 68073.91 0.65411 0.00051405 -0.42698 -0.00033555 0.22713 0.00017849 785.874508557278 789.881564308194 78.361 0.75639 78.361 78.055 78.812 0 308 50 9 0 0 0 0.0002188 2 41164 66.663 66.663 1 1.1914 0.95388 0 20753000 9385300 11368000 9640 1698;436 3652 3750 15127;15128 15128 ESFSLVQVQPGVDIIR 16 0 1 Unmodified _ESFSLVQVQPGVDIIR_ 0 0 0 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379 A0A0G2JL47 A0A0G2JL47 BAT3;BAG6 Large proline-rich protein BAG6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.4955 2 893.988526 1785.9625 65740.88 0.79614 0.00071174 -0.086097 -7.6969E-05 0.71005 0.00063477 894.489968790712 898.992527258947 117.3 0.43317 117.3 117.11 117.55 0 128 31 6 0 0 0 1.9772E-06 1 75011 93.839 93.839 1 1.5099 1.5158 0 16065000 5787200 10278000 9641 368 3653 3751 15129 15129 ESFSLVQVQPGVDIIR 16 0 1 Unmodified _ESFSLVQVQPGVDIIR_ 0 0 0 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379 A0A0G2JL47 A0A0G2JL47 BAT3;BAG6 Large proline-rich protein BAG6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 898.9932 2 893.988526 1785.9625 67108.35 0.60679 0.00054246 -0.6632 -0.00059289 -0.056412 -5.0432E-05 893.987936941516 898.991401957083 129.17 0.42851 129.17 129.01 129.44 0 79 19 6 0 0 0 0.0043789 1 78131 36.417 36.417 1 1.1682 0.98788 0 2972900 1633300 1339600 9642 368 3653 3751 15130 15130 ESFSLVQVQPGVDIIR 16 0 1 Unmodified _ESFSLVQVQPGVDIIR_ 0 0 0 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379 A0A0G2JL47 A0A0G2JL47 BAT3;BAG6 Large proline-rich protein BAG6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 898.9939 2 893.988526 1785.9625 67641.98 0.54736 0.00048933 0.20247 0.000181 0.74982 0.00067033 893.988848320335 898.992598872777 129.01 0.34454 129.01 128.83 129.18 0 61 13 7 0 0 0 0.032239 1 77110 24.071 21.205 1 0.90163 0.78097 0 2685400 1324600 1360800 9643 368 3653 3751 15131 15131 ESGAINTSLFVLGK 14 1 0 Unmodified _ESGAINTSLFVLGK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.4003 2 718.393199 1434.77184 73711.51 0.72239 0.00051896 -0.03685 -2.6473E-05 0.68554 0.00049249 718.393202643451 722.400100544909 108.07 0.73135 108.07 107.62 108.36 0 298 54 8 0 0 0 2.415E-09 2 67238 131.82 131.82 1 0.87592 0.94571 0 37004000 22871000 14132000 9644 1745 3654 3752 15132;15133 15133 ESGAINTSLFVLGK 14 1 0 Unmodified _ESGAINTSLFVLGK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.3934 2 718.393199 1434.77184 73490.7 0.87165 0.00062619 -0.38687 -0.00027792 0.48478 0.00034827 718.39301936052 722.399607200856 107.4 0.65878 107.4 107.05 107.71 0 253 44 8 0 0 0 0.00015696 4 68392 97.813 97.813 1 0.83964 0.88261 0 34970000 19555000 15415000 9645 1745 3654 3752 15134;15135;15136;15137 15135 ESGAINTSLFVLGK 14 1 0 Unmodified _ESGAINTSLFVLGK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.395 2 718.393199 1434.77184 72099.86 1.0408 0.00074768 0.60665 0.00043581 1.6474 0.0011835 718.393275235402 722.400326056533 119.35 0.63124 119.35 119 119.63 0 122 25 8 0 0 0 3.1017E-05 2 70669 120.36 116.47 1 1.6669 1.3383 0 21392000 8400200 12992000 9646 1745 3654 3752 15138;15139 15139 ESGAINTSLFVLGK 14 1 0 Unmodified _ESGAINTSLFVLGK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.3936 2 718.393199 1434.77184 72033.95 0.81051 0.00058227 0.31161 0.00022386 1.1221 0.00080613 718.393115560358 722.400043066509 119.16 0.63781 119.16 118.75 119.39 7.6294E-06 123 26 9 0 0 0 3.4638E-05 2 69670 112.83 112.83 1 1.5066 1.2065 0 20550000 8032700 12518000 9647 1745 3654 3752 15140;15141 15141 ESGMSSLYVFNPIFGK 16 1 0 Oxidation (M) _ESGM(ox)SSLYVFNPIFGK_ ESGM(1)SSLYVFNPIFGK ESGM(53.53)SSLYVFNPIFGK 0 1 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.4404 2 896.434738 1790.85492 64641.44 0.90769 0.00081368 -0.86618 -0.00077647 0.041509 3.721E-05 896.935941134492 900.943262522158 118.27 0.43156 118.27 118.04 118.47 0 96 25 6 0 0 0 0.00016302 1 75844 53.528 49.187 1 0.86644 0.90179 0 11575000 5598000 5976800 9648 1913 3655 3753 15142 15142 1746 ESGMSSLYVFNPIFGK 16 1 0 Oxidation (M) _ESGM(ox)SSLYVFNPIFGK_ ESGM(1)SSLYVFNPIFGK ESGM(69.01)SSLYVFNPIFGK 0 1 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.4413 2 896.434738 1790.85492 65989.59 0.93472 0.00083791 -0.34873 -0.00031261 0.58599 0.0005253 896.434732326138 900.440498486456 117.79 0.44677 117.79 117.56 118.01 7.6294E-06 116 30 7 0 0 0 7.4544E-05 1 77350 69.01 69.01 1 0.6605 0.66797 0 8871600 4997500 3874200 9649 1913 3655 3753 15143 15143 1746 ESGPSGIETELR 12 0 1 Unmodified _ESGPSGIETELR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.819 2 637.814781 1273.61501 76701.24 0.72064 0.00045964 -0.22339 -0.00014248 0.49725 0.00031715 637.814703696193 642.818708698527 56.877 0.80471 56.877 56.56 57.365 0 394 66 8 0 0 0 0.00043863 2 31924 70.977 57.207 1 0.87664 1.0091 0 146980000 79018000 67958000 9650 486 3656 3754 15144;15145 15144 ESGPSGIETELR 12 0 1 Unmodified _ESGPSGIETELR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8193 2 637.814781 1273.61501 76579.45 0.41552 0.00026502 0.23308 0.00014866 0.6486 0.00041368 637.814947281924 642.818958720853 55.999 0.83223 55.999 55.653 56.485 3.8147E-06 366 64 7 0 0 0 1.8229E-05 3 32113 104.22 85.243 1 0.91229 1.0446 0 166980000 90632000 76348000 9651 486 3656 3754 15146;15147;15148 15148 ESGPSGIETELR 12 0 1 Unmodified _ESGPSGIETELR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.8152 2 637.814781 1273.61501 75436.41 0.67877 0.00043293 0.028493 1.8174E-05 0.70726 0.0004511 637.814809403844 642.818876904191 66.332 1.0177 66.332 65.97 66.988 0 332 58 8 0 0 0 0.00018714 2 34273 76.143 60.882 1 1.2475 1.0458 0 25460000 10697000 14763000 9652 486 3656 3754 15149;15150 15150 ESGPSGIETELR 12 0 1 Unmodified _ESGPSGIETELR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.8188 2 637.814781 1273.61501 74819.7 0.50412 0.00032153 0.15873 0.00010124 0.66284 0.00042277 637.81480118893 642.818951503384 66.882 1.1613 66.882 66.487 67.649 0 346 61 8 0 0 0 0.00093495 2 33782 63.624 52.46 1 1.2796 1.0882 0 19288000 8245100 11042000 9653 486 3656 3754 15151;15152 15151 ESGSTLDLSGSR 12 0 1 Unmodified _ESGSTLDLSGSR_ 0 0 0 A0A087WVZ6;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.7946 2 604.791306 1207.56806 76095.56 0.78635 0.00047558 -0.25944 -0.00015691 0.52691 0.00031867 604.791021560841 609.795322265931 37.962 0.66999 37.962 37.612 38.282 0 187 56 4 0 0 0 0.00018473 3 19339 90.827 72.602 1 0.70169 0.70752 0 17595000 9774900 7819700 9654 422;1317 3657 3755 15153;15154;15155 15155 ESGSTLDLSGSR 12 0 1 Unmodified _ESGSTLDLSGSR_ 0 0 0 A0A087WVZ6;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 609.7953 2 604.791306 1207.56806 77436.81 0.46196 0.00027939 -0.22929 -0.00013867 0.23267 0.00014072 604.791199362468 609.79522822753 43.012 0.58732 43.012 42.757 43.344 0 169 37 6 0 0 0 0.0071291 1 20147 48.741 48.741 1 1.509 1.2617 0 3650200 1472400 2177800 9655 422;1317 3657 3755 15156 15156 ESHTAVVYTEK 11 1 0 Unmodified _ESHTAVVYTEK_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3232 2 632.314417 1262.61428 77225.14 0.28787 0.00018202 0.004907 3.1027E-06 0.29278 0.00018513 632.314414421337 636.321477186257 21.472 0.35705 21.472 21.322 21.679 0 55 16 7 0 0 0 3.4796E-66 2 7599 254.5 228.94 1 0.79413 0.83888 0 20073000 10695000 9377900 9656 680 3658 3756 15157;15158 15158 ESHTAVVYTEK 11 1 0 Unmodified _ESHTAVVYTEK_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3141 2 632.314417 1262.61428 76109.6 0.40593 0.00025668 -0.50436 -0.00031892 -0.09843 -6.2239E-05 632.314293115601 636.321367973633 23.674 0.36498 23.674 23.459 23.824 0 93 17 8 0 0 0 5.7534E-06 2 8076 110.47 110.47 1 1.4177 1.1184 0 4077600 1818300 2259300 9657 680 3658 3756 15159;15160 15160 ESHTAVVYTEK 11 1 0 Unmodified _ESHTAVVYTEK_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.3146 2 632.314417 1262.61428 76289.2 0.44389 0.00028068 -0.2687 -0.0001699 0.17519 0.00011077 632.314449784027 636.321402099916 23.495 0.38695 23.495 23.325 23.712 0 97 20 7 0 0 0 0.00078841 2 7534 73.841 73.841 1 1.3263 1.0671 0 3016200 1325700 1690500 9658 680 3658 3756 15161;15162 15162 ESIFPVVR 8 0 1 Unmodified _ESIFPVVR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.7755 2 473.77146 945.528367 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.735 1 84.735 84.235 85.235 0 0 0 0 0.034019 1 52065 60.972 32.718 1 9659 1565 3659 3757 15163 15163 ESIGNVQVLLEYHIAYLK 18 1 0 Unmodified _ESIGNVQVLLEYHIAYLK_ 0 0 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.3847 3 697.049124 2088.12554 74859.54 0.87314 0.00060862 0.066891 4.6626E-05 0.94003 0.00065525 697.383541492213 700.054930356961 132.2 0.34093 132.2 132.02 132.36 0 73 15 7 0 0 0 0.048676 1 80376 13.6 13.6 1 1.1375 0.90783 0 6906900 3266600 3640200 9660 531 3660 3758 15164 15164 ESIGSELGNSFASNIR 16 0 1 Unmodified _ESIGSELGNSFASNIR_ 0 0 0 Q5VZL5 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 840.9139 2 840.913015 1679.81148 NaN NaN NaN 1.0506 0.0008835 NaN NaN NaN NaN 93.671 0.16886 93.671 93.61 93.779 0 0 0 0 0.0037493 1 56874 55.261 41.298 1 NaN NaN 0 5549200 5549200 0 9661 1835 3661 3759 15165 15165 ESIGSELGNSFASNIR 16 0 1 Unmodified _ESIGSELGNSFASNIR_ 0 0 0 Q5VZL5 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 840.9163 2 840.913015 1679.81148 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.717 1 93.717 93.217 94.217 0 0 0 0 0.0068067 1 56881 49.732 40.077 1 9662 1835 3661 3759 15166 15166 ESIGSELGNSFASNIR 16 0 1 Unmodified _ESIGSELGNSFASNIR_ 0 0 0 Q5VZL5 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.9145 2 840.913015 1679.81148 NaN NaN NaN 0.98896 0.00083163 NaN NaN NaN NaN 92.98 0.36462 92.98 92.786 93.151 0 0 0 0 3.2541E-06 1 57676 82.85 63.089 1 NaN NaN 0 8180400 8180400 0 9663 1835 3661 3759 15167 15167 ESIGSELGNSFASNIR 16 0 1 Unmodified _ESIGSELGNSFASNIR_ 0 0 0 Q5VZL5 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.9191 2 840.913015 1679.81148 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.006 1 93.006 92.506 93.506 0 0 0 0 0.00096407 1 57693 66.393 46.936 1 9664 1835 3661 3759 15168 15168 ESIGSELGNSFASNIR 16 0 1 Unmodified _ESIGSELGNSFASNIR_ 0 0 0 Q5VZL5 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 845.9163 2 840.913015 1679.81148 67723.99 0.71219 0.00059889 0.78962 0.00066401 1.5018 0.0012629 841.918584790053 845.917039211884 107.48 0.39072 107.48 107.29 107.68 7.6294E-06 91 22 7 0 0 0 0.00097133 1 61553 47.189 40.805 1 1.6943 1.4395 0 5252100 1664600 3587500 9665 1835 3661 3759 15169 15169 ESIGSELGNSFASNIR 16 0 1 Unmodified _ESIGSELGNSFASNIR_ 0 0 0 Q5VZL5 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.9174 2 840.913015 1679.81148 66836.62 0.609 0.00051212 0.58849 0.00049487 1.1975 0.001007 841.415854790029 846.418365101562 107.36 0.53967 107.36 107.22 107.76 0 114 36 5 0 0 0 0.00023373 1 60633 58.313 47.703 1 1.6788 1.3976 0 5014100 1592100 3422000 9666 1835 3661 3759 15170 15170 ESISENPTLDLPCSIGR 17 0 1 Unmodified _ESISENPTLDLPCSIGR_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.9651 2 944.459472 1886.90439 62266.88 0.66729 0.00063023 -0.1973 -0.00018635 0.46999 0.00044388 944.458542289216 949.464115699886 99.403 0.48558 99.403 99.111 99.597 0 151 40 5 0 0 0 0.015296 1 62270 28.361 23.082 1 1.5859 1.5891 0 18369000 8139700 10229000 9667 2143 3662 3760 15171 15171 ESIVDVEGVVR 11 0 1 Unmodified _ESIVDVEGVVR_ 0 0 0 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85;C9JQM9;H7C278 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.3287 2 601.324785 1200.63502 78514.73 0.86119 0.00051785 0.26858 0.0001615 1.1298 0.00067936 601.324959432258 606.32897290746 85.453 0.65421 85.453 85.07 85.724 0 173 53 6 0 0 0 0.00046144 2 51298 87.913 65.827 1 1.4117 1.4762 0 38902000 16448000 22454000 9668 610 3663 3761 15172;15173 15172 ESIVDVEGVVR 11 0 1 Unmodified _ESIVDVEGVVR_ 0 0 0 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85;C9JQM9;H7C278 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.3251 2 601.324785 1200.63502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.236 1 85.236 84.736 85.736 -7.6294E-06 0 0 0 0.038665 1 51183 54.982 14.63 1 9669 610 3663 3761 15174 15174 ESLIDGIK 8 1 0 Unmodified _ESLIDGIK_ 0 0 0 P23526;Q1RMG2 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.7552 2 437.74765 873.480748 92911.08 0.29027 0.00012707 0.15697 6.8713E-05 0.44724 0.00019578 437.747517938301 441.754847498191 77.698 0.86719 77.698 77.213 78.08 0 183 72 4 0 0 0 0.027047 1 46862 54.157 0 1 1.7938 1.7905 0 14861000 4185500 10675000 9670 1512 3664 3762 15175 15175 ESLITDSGK 9 1 0 Unmodified _ESLITDSGK_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.2453 2 475.245472 948.476391 105466.7 0.31678 0.00015055 -0.10404 -4.9444E-05 0.21274 0.0001011 475.245321605616 479.252745878822 30.135 0.18473 30.135 30.055 30.24 0 37 15 4 0 0 0 0.028936 2 14699 46.462 33.935 1 0.85648 0.85711 0 9794600 6640000 3154600 9671 288 3665 3763 15176;15177 15177 ESLLVSHPSVQTK 13 1 0 Unmodified _ESLLVSHPSVQTK_ 0 0 0 A0A087WX60;Q86TC9 A0A087WX60 A0A087WX60 MYPN Myopalladin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.8995 2 712.890823 1423.76709 NaN NaN NaN 0.062145 4.4302E-05 NaN NaN NaN NaN 46.375 0.32953 46.375 46.21 46.54 0 0 0 0 7.1101E-15 1 25006 130.01 87.263 1 NaN NaN 0 6496500 0 6496500 9672 429 3666 3764 15178 15178 ESLNLEDQIESDESELK 17 1 0 Unmodified _ESLNLEDQIESDESELK_ 0 0 0 A0A024R8Y0;Q9BZD4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 989.9615 2 989.460389 1976.90623 60922.76 0.49016 0.00048499 0.35854 0.00035476 0.8487 0.00083975 989.460543194304 993.468510457322 101 0.54136 101 100.82 101.36 0 219 41 7 0 0 0 2.821E-05 2 61904 82.069 77.368 1 0.83717 0.82413 0 19771000 12727000 7043800 9673 264 3667 3765 15179;15180 15180 ESLNLEDQIESDESELK 17 1 0 Unmodified _ESLNLEDQIESDESELK_ 0 0 0 A0A024R8Y0;Q9BZD4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.4601 2 989.460389 1976.90623 60701.07 0.51679 0.00051134 0.29195 0.00028888 0.80874 0.00080022 989.962309384472 993.468008483037 100.49 0.55904 100.49 100.21 100.76 0 204 45 7 0 0 0 7.8158E-05 1 62976 63.181 55.815 1 0.8117 0.8723 0 21497000 11320000 10177000 9674 264 3667 3765 15181 15181 ESLNLEDQIESDESELK 17 1 0 Unmodified _ESLNLEDQIESDESELK_ 0 0 0 A0A024R8Y0;Q9BZD4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 993.4713 2 989.460389 1976.90623 59442.43 0.73729 0.00072952 -0.057007 -5.6406E-05 0.68029 0.00067312 989.96106349317 993.969045800495 113.83 0.67984 113.83 113.46 114.14 7.6294E-06 141 30 7 0 0 0 0.0016278 1 66306 39.509 36.286 1 0.97958 0.76606 0 11798000 5698000 6100000 9675 264 3667 3765 15182 15182 ESLNLEDQIESDESELK 17 1 0 Unmodified _ESLNLEDQIESDESELK_ 0 0 0 A0A024R8Y0;Q9BZD4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 989.9623 2 989.460389 1976.90623 58683.29 0.30218 0.000299 0.041983 4.1541E-05 0.34416 0.00034054 989.460331014233 993.969503497456 113.94 0.825 113.94 113.47 114.3 0 124 37 6 0 0 0 7.2568E-05 2 65484 67.964 67.964 1 0.88129 0.70746 0 18037000 8443900 9593100 9676 264 3667 3765 15183;15184 15184 ESLNLEDQIESDESELKK 18 2 0 Unmodified _ESLNLEDQIESDESELKK_ 0 0 1 A0A024R8Y0;Q9BZD4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.0181 3 702.674339 2105.00119 73650.33 0.63056 0.00044308 -0.38303 -0.00026915 0.24753 0.00017393 702.674499277972 708.350724308471 102.91 0.34035 102.91 102.69 103.04 -7.6294E-06 60 22 4 0 0 0 0.045665 1 58403 9.0576 9.0576 1 1.0203 0.88314 0 3690000 1322500 2367600 9677 264 3668 3766 15185 15185 ESLQDTQPVGVLVDCCK 17 1 0 Unmodified _ESLQDTQPVGVLVDCCK_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 974.9647 2 974.461158 1946.90776 61242.09 0.33421 0.00032567 -0.14778 -0.00014401 0.18643 0.00018167 974.962833216912 978.468358323027 88.793 0.73528 88.793 88.378 89.113 0 391 56 10 0 0 0 4.1726E-57 2 53379 178.58 170.67 1 0.81825 0.92192 0 125720000 67834000 57885000 9678 2023;1687 3669 3767 15186;15187 15187 ESLQDTQPVGVLVDCCK 17 1 0 Unmodified _ESLQDTQPVGVLVDCCK_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 978.4695 2 974.461158 1946.90776 61001.62 0.43628 0.00042514 -0.17306 -0.00016864 0.26322 0.0002565 974.962672737665 978.468383274991 87.968 0.66315 87.968 87.633 88.296 0 369 54 8 0 0 0 3.0704E-25 2 54072 143.98 143.98 1 0.83126 0.93548 0 121100000 63084000 58021000 9679 2023;1687 3669 3767 15188;15189 15189 ESLQDTQPVGVLVDCCK 17 1 0 Unmodified _ESLQDTQPVGVLVDCCK_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 978.4681 2 974.461158 1946.90776 60698.68 -0.071072 -6.9257E-05 0.083426 8.1296E-05 0.012354 1.2038E-05 974.963155184734 978.46857806425 101.42 1.2898 101.42 100.99 102.28 0 525 84 11 0 0 0 5.7591E-09 2 57470 102.52 99.392 1 1.411 1.2107 0 80639000 33221000 47418000 9680 2023;1687 3669 3767 15190;15191 15191 ESLQDTQPVGVLVDCCK 17 1 0 Unmodified _ESLQDTQPVGVLVDCCK_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 978.9697 2 974.461158 1946.90776 60505.82 0.037397 3.6442E-05 -0.016764 -1.6336E-05 0.020633 2.0106E-05 974.963043169155 978.468499049427 101.41 1.0155 101.41 100.93 101.95 7.6294E-06 472 66 11 0 0 0 5.2613E-05 2 56402 77.192 77.192 1 1.4034 1.196 0 90520000 39214000 51306000 9681 2023;1687 3669 3767 15192;15193 15193 ESLTSFYQEEIQER 14 0 1 Unmodified _ESLTSFYQEEIQER_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 884.915 2 879.912681 1757.81081 NaN NaN NaN -0.5473 -0.00048158 NaN NaN NaN NaN 93.856 0.61073 93.856 93.598 94.209 0 0 0 0 2.0173E-22 1 56921 138.99 114.65 1 NaN NaN 0 26263000 0 26263000 9682 1421 3670 3768 15194 15194 ESLTSFYQEEIQER 14 0 1 Unmodified _ESLTSFYQEEIQER_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 884.9154 2 879.912681 1757.81081 NaN NaN NaN -1.0323 -0.00090838 NaN NaN NaN NaN 93.127 0.54065 93.127 92.86 93.4 -7.6294E-06 0 0 0 7.9723E-15 1 57730 118.9 95.054 1 NaN NaN 0 27992000 0 27992000 9683 1421 3670 3768 15195 15195 ESLTSFYQEEIQER 14 0 1 Unmodified _ESLTSFYQEEIQER_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 884.9159 2 879.912681 1757.81081 64494.84 0.64618 0.00056858 -0.10734 -9.445E-05 0.53884 0.00047413 879.912446000733 884.916482299231 107.46 0.60423 107.46 107.22 107.82 0 225 34 10 0 0 0 0.00023792 2 61495 63.944 63.944 1 1.1936 1.0137 0 33591000 15178000 18413000 9684 1421 3670 3768 15196;15197 15197 ESLTSFYQEEIQER 14 0 1 Unmodified _ESLTSFYQEEIQER_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 880.4141 2 879.912681 1757.81081 65047.03 0.28157 0.00024775 0.11564 0.00010175 0.3972 0.0003495 879.912721601761 884.916721489477 107.45 0.62772 107.45 107.22 107.85 7.6294E-06 292 40 9 0 0 0 1.1946E-09 2 60631 120.96 120.96 1 1.2999 1.134 0 28723000 12054000 16669000 9685 1421 3670 3768 15198;15199 15199 ESLTSFYQEEIQERDEK 17 1 1 Unmodified _ESLTSFYQEEIQERDEK_ 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.3423 3 710.999046 2129.97531 72244.13 0.73103 0.00051976 0.19934 0.00014173 0.93037 0.0006615 711.333422506558 717.341262660222 93.594 0.59399 93.594 93.297 93.891 0 250 40 9 0 0 0 6.0135E-05 1 52285 56.906 56.906 1 1.3568 1.1645 0 11015000 4923100 6091900 9686 1421 3671 3769 15200 15200 ESLTSFYQEEIQERDEK 17 1 1 Unmodified _ESLTSFYQEEIQERDEK_ 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.3427 3 710.999046 2129.97531 71630.96 0.61476 0.00043709 0.15812 0.00011242 0.77288 0.00054952 711.333187852896 717.341263341999 93.55 0.58648 93.55 93.247 93.833 -7.6294E-06 247 39 9 0 0 0 0.00082329 1 51453 38.418 38.418 1 1.4719 1.2405 0 8327800 3620100 4707800 9687 1421 3671 3769 15201 15201 ESLTTDLQTR 10 0 1 Unmodified _ESLTTDLQTR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.2989 2 582.298767 1162.58298 80131.05 0.30757 0.0001791 -0.37889 -0.00022063 -0.071312 -4.1525E-05 582.298371123277 587.302746031496 47.676 0.59241 47.676 47.354 47.946 -3.8147E-06 147 41 5 0 0 0 8.1487E-06 1 26565 123.35 107.02 1 1.0413 1.1843 0 118830000 54168000 64660000 9688 1336 3672 3770 15202 15202 ESLTTDLQTR 10 0 1 Unmodified _ESLTTDLQTR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.299 2 582.298767 1162.58298 79664.97 0.56442 0.00032866 -0.47192 -0.0002748 0.092499 5.3862E-05 582.298567190755 587.302558147428 56.228 0.90151 56.228 55.878 56.78 0 392 57 11 0 0 0 0.022475 1 28229 55.064 55.064 1 2.0187 1.6468 0 14832000 4716500 10116000 9689 1336 3672 3770 15203 15203 ESLTTDLQTR 10 0 1 Unmodified _ESLTTDLQTR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.2987 2 582.298767 1162.58298 78017.2 0.56161 0.00032702 -0.17687 -0.00010299 0.38474 0.00022403 582.298595617751 587.302577233832 56.728 0.89669 56.728 56.348 57.244 -3.8147E-06 397 61 10 0 0 0 0.059599 1 27915 41.399 37.828 1 2.0191 1.6566 0 13683000 4564300 9118600 9690 1336 3672 3770 15204 15204 ESMAGNKPANAVLHK 15 2 0 Oxidation (M) _ESM(ox)AGNKPANAVLHK_ ESM(1)AGNKPANAVLHK ESM(79.87)AGNKPANAVLHK 0 1 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.9491 3 528.271718 1581.79333 86097.73 0.3104 0.00016398 0.67719 0.00035774 0.98759 0.00052172 528.272059498366 533.61480790065 17.973 0.38473 17.973 17.894 18.279 0 102 26 6 0 0 0 3.5829E-05 1 5048 79.875 79.875 1 0.88305 1.0354 0 13282000 6191800 7089900 9691 515 3673 3771 15205 15205 370 ESMAGNKPANAVLHK 15 2 0 Oxidation (M) _ESM(ox)AGNKPANAVLHK_ ESM(1)AGNKPANAVLHK ESM(88.55)AGNKPANAVLHK 0 1 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.6146 3 528.271718 1581.79333 82279.34 0.2348 0.00012404 -0.20564 -0.00010863 0.029163 1.5406E-05 528.271870124584 533.614506739532 17.869 0.33995 17.869 17.681 18.021 0 69 16 8 0 0 0 3.9881E-06 2 4711 88.552 88.552 1 0.91923 1.0541 0 20968000 11599000 9369200 9692 515 3673 3771 15206;15207 15206 370 ESNMSTLLER 10 0 1 Oxidation (M) _ESNM(ox)STLLER_ ESNM(1)STLLER ESNM(45.16)STLLER 0 1 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.285 2 598.284802 1194.55505 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.738 1 34.738 34.238 35.238 0 0 0 0 0.020812 1 17615 45.161 35.573 1 9693 1396 3674 3772 15208 15208 1072 ESNTDQGFFK 10 1 0 Unmodified _ESNTDQGFFK_ 0 0 0 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.773 2 586.76456 1171.51457 80781.16 1.0248 0.00060131 -0.047479 -2.7859E-05 0.97731 0.00057345 586.764322168463 590.771481585093 44.094 0.69 44.094 43.735 44.425 0 196 60 6 0 0 0 0.0034605 1 24168 64.42 60.486 1 0.91912 0.94964 0 24987000 12578000 12409000 9694 2052 3675 3773 15209 15209 ESNTDQGFFK 10 1 0 Unmodified _ESNTDQGFFK_ 0 0 0 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.7644 2 586.76456 1171.51457 80739.98 0.28846 0.00016926 0.39045 0.0002291 0.67891 0.00039836 586.764855446198 590.771608027604 51.311 0.84138 51.311 50.819 51.66 0 225 57 5 0 0 0 0.034771 1 25131 40.882 36.948 1 1.4474 1.1277 0 3742800 1630500 2112400 9695 2052 3675 3773 15210 15210 ESNTDQGFFK 10 1 0 Unmodified _ESNTDQGFFK_ 0 0 0 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.765 2 586.76456 1171.51457 80500.78 0.28395 0.00016661 0.28094 0.00016484 0.56488 0.00033145 586.76488318512 590.771698285106 51.538 0.94093 51.538 51.1 52.04 0 278 66 6 0 0 0 0.009241 1 24701 54.982 49.5 1 1.471 1.1677 0 3134900 1349800 1785100 9696 2052 3675 3773 15211 15211 ESPELLELIEDLK 13 1 0 Unmodified _ESPELLELIEDLK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.9133 2 764.411254 1526.80796 69833.31 0.5499 0.00042035 0.29558 0.00022594 0.84548 0.0006463 764.411582344253 768.418416239716 133.52 0.25275 133.52 133.39 133.64 0 24 5 8 0 0 0 9.7173E-14 1 87520 133.79 133.79 1 0.96614 1.1345 0 306300000 156150000 150150000 9697 2063 3676 3774 15212 15212 ESPELLELIEDLK 13 1 0 Unmodified _ESPELLELIEDLK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.4194 2 764.411254 1526.80796 69477.95 0.59636 0.00045587 0.66949 0.00051177 1.2659 0.00096764 764.411753204175 768.418695000393 133.5 0.33052 133.5 133.3 133.63 0 26 7 8 0 0 0 8.0476E-75 2 89711 222.18 222.18 1 0.98588 1.1452 0 228940000 118700000 110230000 9698 2063 3676 3774 15213;15214 15213 ESPVEFTGHK 10 1 0 Unmodified _ESPVEFTGHK_ 0 0 0 Q5SY16 Q5SY16 Q5SY16 NOL9 Polynucleotide 5-hydroxyl-kinase NOL9 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.7841 2 565.77747 1129.54039 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.31 1 28.31 27.81 28.81 0 0 0 0 8.2366E-06 1 13331 100.02 65.193 1 9699 1818 3677 3775 15215 15215 ESPVEFTGHK 10 1 0 Unmodified _ESPVEFTGHK_ 0 0 0 Q5SY16 Q5SY16 Q5SY16 NOL9 Polynucleotide 5-hydroxyl-kinase NOL9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.7842 2 565.77747 1129.54039 81712.54 0.29195 0.00016518 0.055359 3.1321E-05 0.34731 0.0001965 565.777282127982 569.784227852374 27.651 0.26813 27.651 27.505 27.773 -1.9073E-06 54 14 7 0 0 0 0.0048948 1 12922 60.892 43.496 1 1.6644 1.7025 0 31655000 13019000 18636000 9700 1818 3677 3775 15216 15216 ESQDTSFTTLVER 13 0 1 Unmodified _ESQDTSFTTLVER_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.8672 2 756.86246 1511.71037 70097.34 0.75648 0.00057255 -0.2258 -0.0001709 0.53068 0.00040165 756.862687473447 761.86622112624 79.578 0.53997 79.578 79.252 79.792 0 209 47 8 0 0 0 7.7297E-05 1 47169 94.465 76.601 1 2.4888 2.5634 0 24682000 5940500 18742000 9701 1688 3678 3776 15217 15217 ESQDTSFTTLVER 13 0 1 Unmodified _ESQDTSFTTLVER_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.8668 2 756.86246 1511.71037 69789.3 0.41354 0.00031299 -0.26651 -0.00020171 0.14703 0.00011128 756.86243562215 761.866053806864 78.558 0.72976 78.558 78.08 78.81 7.6294E-06 252 62 7 0 0 0 8.7208E-10 1 47573 124.42 107.4 1 2.6671 2.9145 0 36903000 13158000 23746000 9702 1688 3678 3776 15218 15218 ESQVNFQEGQLNSGK 15 1 0 Unmodified _ESQVNFQEGQLNSGK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 836.9041 2 832.897365 1663.78018 67550.88 0.77304 0.00064386 -0.11008 -9.1687E-05 0.66296 0.00055217 833.399226296157 836.904008056888 48.57 0.47096 48.57 48.334 48.804 0 152 34 6 0 0 0 1.5056E-05 3 26393 89.189 76.208 1 1.181 1.2452 0 16376000 8738100 7637700 9703 1581 3679 3777 15219;15220;15221 15219 ESQVNFQEGQLNSGK 15 1 0 Unmodified _ESQVNFQEGQLNSGK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.4009 2 832.897365 1663.78018 NaN NaN NaN -0.0263 -2.1906E-05 NaN NaN NaN NaN 47.395 0.29361 47.395 47.206 47.5 3.8147E-06 0 0 0 0.00030643 1 26231 75.479 51.492 1 NaN NaN 0 6693900 6693900 0 9704 1581 3679 3777 15222 15222 ESQVNFQEGQLNSGK 15 1 0 Unmodified _ESQVNFQEGQLNSGK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 836.9043 2 832.897365 1663.78018 66881.18 0.7405 0.00061676 -0.62617 -0.00052153 0.11433 9.5226E-05 832.896642564313 836.903823834469 56.885 0.47987 56.885 56.654 57.134 -3.8147E-06 104 34 4 0 0 0 0.016397 1 28040 32.624 28.979 1 1.9522 1.5405 0 2025900 572690 1453200 9705 1581 3679 3777 15223 15223 ESRYEEEEEQSR 12 0 2 Unmodified _ESRYEEEEEQSR_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.8973 3 524.225379 1569.65431 82095.61 0.15382 8.0636E-05 0.20515 0.00010754 0.35897 0.00018818 524.225370323551 530.897606963235 15.402 0.49204 15.402 15.133 15.625 0 115 29 5 0 0 0 9.1371E-05 3 3075 78.324 78.324 1 0.55186 0.61736 0 7053300 4707800 2345500 9706 2148 3680 3778 15224;15225;15226 15225 ESSLTEPVIVGLLK 14 1 0 Unmodified _ESSLTEPVIVGLLK_ 0 0 0 B4DSD7;E9PFR3;A8K6Y2;A0A024RD11;Q14738 B4DSD7 B4DSD7 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.9406 2 742.932157 1483.84976 71745.61 0.88351 0.00065639 0.039197 2.9121E-05 0.92271 0.00068551 742.932165910584 747.440755439557 120.03 0.44725 120.03 119.82 120.26 0 141 30 7 0 0 0 6.0078E-05 2 77284 91.549 91.549 1 1.3545 1.3741 0 13432000 5541900 7889800 9707 375 3681 3779 15227;15228 15228 ESSLTEPVIVGLLK 14 1 0 Unmodified _ESSLTEPVIVGLLK_ 0 0 0 B4DSD7;E9PFR3;A8K6Y2;A0A024RD11;Q14738 B4DSD7 B4DSD7 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.9408 2 742.932157 1483.84976 72155.23 0.79434 0.00059014 0.0038162 2.8352E-06 0.79816 0.00059298 742.932151002557 746.939354833588 119.5 0.47026 119.5 119.27 119.74 -7.6294E-06 152 33 6 0 0 0 0.00022698 2 78718 65.5 65.5 1 1.2477 1.2607 0 13184000 6171300 7012400 9708 375 3681 3779 15229;15230 15229 ESSLTEPVIVGLLK 14 1 0 Unmodified _ESSLTEPVIVGLLK_ 0 0 0 B4DSD7;E9PFR3;A8K6Y2;A0A024RD11;Q14738 B4DSD7 B4DSD7 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.4354 2 742.932157 1483.84976 72217.41 1.2748 0.00094706 -0.052046 -3.8667E-05 1.2227 0.0009084 742.931923784992 746.938930057712 132.52 0.43565 132.52 132.31 132.75 0 79 19 7 0 0 0 0.0030249 2 80587 47.844 47.844 1 0.93134 0.75031 0 2808900 1392400 1416500 9709 375 3681 3779 15231;15232 15231 ESSTVFELK 9 1 0 Unmodified _ESSTVFELK_ 0 0 0 B8ZZU8;I3L0M9;Q15370;A0A0B4J296 B8ZZU8 B8ZZU8 TCEB2 Transcription elongation factor B polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.2764 2 520.268947 1038.52334 83790.46 0.63152 0.00032856 0.32308 0.00016809 0.9546 0.00049665 520.269101779853 524.276161332163 65.891 0.50545 65.891 65.614 66.119 7.6294E-06 159 47 4 0 0 0 0.020893 1 37985 49.85 29.712 1 1.9321 1.9992 0 12712000 3790200 8922000 9710 1117 3682 3780 15233 15233 ESSVGGEDLDSYPDFLHK 18 1 0 Unmodified _ESSVGGEDLDSYPDFLHK_ 0 0 0 A7E234;Q9H582;Q9NVH8;Q9NZF0;A0A087WZL9 A7E234 A7E234 ZNF644 Zinc finger protein 644 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.6433 3 665.637448 1993.89052 76790.05 0.46336 0.00030843 0.415 0.00027624 0.87836 0.00058467 665.971816473481 668.309365943475 101.68 0.30021 101.68 101.46 101.76 0 57 18 5 0 0 0 0.050573 1 57609 8.8232 8.8232 1 1.2589 1.0641 0 1442400 427290 1015100 9711 693 3683 3781 15234 15234 ESTESSNTTIEDEDVK 16 1 0 Unmodified _ESTESSNTTIEDEDVK_ 0 0 0 D6R938;A0A024RDK3;E9PBG7;E9PF82;B7Z2B0;Q13557;Q92991;H0Y9J2 D6R938 D6R938 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.3957 2 892.389433 1782.76431 NaN NaN NaN 0.20701 0.00018474 NaN NaN NaN NaN 32.377 0.30272 32.377 32.221 32.524 0 0 0 0 0.00024361 1 16021 69.864 66.219 1 NaN NaN 0 2083000 0 2083000 9712 388 3684 3782 15235 15235 ESTGAQVQVAGDMLPNSTER 20 0 1 Oxidation (M) _ESTGAQVQVAGDM(ox)LPNSTER_ ESTGAQVQVAGDM(1)LPNSTER ESTGAQVQVAGDM(185.27)LPNSTER 0 1 0 Q53SS8;Q15365;H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;J3QT27;Q5MJP6;E9PFP8;P57721;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1053.4918 2 1053.49203 2104.96951 59469.13 0.50425 0.00053122 -0.457 -0.00048144 0.047252 4.9779E-05 1053.99335732433 1058.49590026594 59.72 0.89685 59.72 59.253 60.15 0 459 73 9 0 0 0 1.4144E-65 3 34015 185.27 185.27 1 2.7344 3.0527 0 85724000 22213000 63511000 9713 1263;1760;1759 3685 3783 15236;15237;15238 15237 968 ESTGAQVQVAGDMLPNSTER 20 0 1 Oxidation (M) _ESTGAQVQVAGDM(ox)LPNSTER_ ESTGAQVQVAGDM(1)LPNSTER ESTGAQVQVAGDM(93.49)LPNSTER 0 1 0 Q53SS8;Q15365;H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;J3QT27;Q5MJP6;E9PFP8;P57721;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1058.498 2 1053.49203 2104.96951 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.066 1 60.066 59.566 60.566 0 0 0 0 1.2452E-08 1 34264 93.494 72.909 1 9714 1263;1760;1759 3685 3783 15239 15239 968 ESTGAQVQVAGDMLPNSTER 20 0 1 Oxidation (M) _ESTGAQVQVAGDM(ox)LPNSTER_ ESTGAQVQVAGDM(1)LPNSTER ESTGAQVQVAGDM(147.56)LPNSTER 0 1 0 Q53SS8;Q15365;H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;J3QT27;Q5MJP6;E9PFP8;P57721;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1053.9937 2 1053.49203 2104.96951 59786.76 0.84253 0.0008876 -0.72609 -0.00076493 0.11644 0.00012267 1053.99269076269 1058.9971244021 58.984 0.86428 58.984 58.492 59.356 3.8147E-06 550 82 9 0 0 0 9.8803E-32 4 34177 147.56 139.25 1 2.5484 2.9021 0 107640000 27358000 80282000 9715 1263;1760;1759 3685 3783 15240;15241;15242;15243 15241 968 ESTGAQVQVAGDMLPNSTER 20 0 1 Oxidation (M) _ESTGAQVQVAGDM(ox)LPNSTER_ ESTGAQVQVAGDM(1)LPNSTER ESTGAQVQVAGDM(53.17)LPNSTER 0 1 0 Q53SS8;Q15365;H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;J3QT27;Q5MJP6;E9PFP8;P57721;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1058.9972 2 1053.49203 2104.96951 59929.24 -0.011249 -1.1851E-05 -0.031409 -3.3089E-05 -0.042658 -4.494E-05 1053.9934247037 1058.99794342839 70.216 0.53738 70.216 69.977 70.515 0 303 49 8 0 0 0 3.2033E-06 1 36247 53.169 52.135 1 1.2182 1.0017 0 8569500 3975200 4594300 9716 1263;1760;1759 3685 3783 15244 15244 968 ESTGAQVQVAGDMLPNSTER 20 0 1 Unmodified _ESTGAQVQVAGDMLPNSTER_ 0 0 0 Q53SS8;Q15365;H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;J3QT27;Q5MJP6;E9PFP8;P57721;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1051.0002 2 1045.49457 2088.9746 59818.84 0.14932 0.00015612 0.15751 0.00016468 0.30684 0.00032079 1045.9965258579 1051.00039974194 90.035 0.47276 90.035 89.75 90.222 0 188 33 7 0 0 0 0.017222 1 49734 23.456 23.456 1 1.6505 1.3857 0 4242500 1659100 2583300 9717 1263;1760;1759 3685 3784 15245 15245 ESTGNMVTGQTVCK 14 1 0 Oxidation (M) _ESTGNM(ox)VTGQTVCK_ ESTGNM(1)VTGQTVCK ESTGNM(67.78)VTGQTVCK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.3507 2 764.342523 1526.67049 NaN NaN NaN -0.849 -0.00064893 NaN NaN NaN NaN 21.244 0.38297 21.244 21.059 21.442 0 0 0 0 0.00057214 1 7506 67.776 52.205 1 NaN NaN 0 4668200 0 4668200 9718 908 3686 3785 15246 15246 736 ESTGNMVTGQTVCK 14 1 0 Oxidation (M) _ESTGNM(ox)VTGQTVCK_ ESTGNM(1)VTGQTVCK ESTGNM(87.36)VTGQTVCK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.3444 2 764.342523 1526.67049 69581.65 0.54917 0.00041975 -0.31123 -0.00023788 0.23794 0.00018187 764.342195633169 768.349783458293 21.188 0.41113 21.188 20.997 21.408 1.9073E-06 84 19 6 0 0 0 4.2388E-05 2 7461 87.363 71.791 1 1.0777 1.1199 0 9918200 4267000 5651200 9719 908 3686 3785 15247;15248 15248 736 ESTGNMVTGQTVCK 14 1 0 Unmodified _ESTGNMVTGQTVCK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.3453 2 756.345065 1510.67558 71774.85 0.35845 0.00027111 0.29739 0.00022493 0.65585 0.00049605 756.344951014799 760.35213542688 39.059 0.39472 39.059 38.84 39.234 0 123 30 5 0 0 0 0.031992 1 17333 30.563 23.874 1 2.3254 1.9 0 4738400 1389500 3348900 9720 908 3686 3786 15249 15249 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.3173 2 534.314023 1066.61349 82261.8 0.56543 0.00030212 -0.27417 -0.00014649 0.29126 0.00015563 534.314032959868 539.317911611652 63.857 2.2632 63.857 63.128 65.391 0 1486 209 11 0 0 0 2.0076E-72 5 36831 236.09 180.49 1 0.81927 0.9747 0 1468400000 793050000 675340000 9721 891 3687 3787 15250;15251;15252;15253;15254 15253 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 356.5448 3 356.545108 1066.61349 98685.19 0.22487 8.0176E-05 -0.044604 -1.5903E-05 0.18026 6.4272E-05 356.545045490693 359.88114757667 63.98 1.442 63.98 63.217 64.659 0 604 135 7 0 0 0 0.0016365 3 36773 57.59 32.809 1 0.91296 1.0795 0 268980000 135960000 133020000 9722 891 3687 3787 15255;15256;15257 15257 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 356.5449 3 356.545108 1066.61349 100056.2 -0.15985 -5.6994E-05 0.052041 1.8555E-05 -0.10781 -3.8439E-05 356.544983191378 359.881215792596 64.936 0.14296 64.936 64.846 64.989 0 39 12 4 0 0 0 0.014806 1 37370 32.32 5.9363 1 0.77001 0.80114 0 5353600 2757500 2596100 9723 891 3687 3787 15258 15258 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 359.881 3 356.545108 1066.61349 NaN NaN NaN 0.095193 3.394E-05 NaN NaN NaN NaN 64.707 0.19684 64.707 64.649 64.846 0 0 0 0 0.051132 1 37222 29.473 14.213 1 NaN NaN 0 7595400 0 7595400 9724 891 3687 3787 15259 15259 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.3184 2 534.314023 1066.61349 82094.41 0.45613 0.00024372 -0.26457 -0.00014136 0.19156 0.00010235 534.313856198912 539.317848510754 60.913 1.9335 60.913 60.537 62.47 3.8147E-06 1144 179 11 0 0 0 1.7853E-45 5 35485 205.7 142.13 1 0.87109 1.0303 0 1539800000 792570000 747210000 9725 891 3687 3787 15260;15261;15262;15263;15264 15260 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 356.5452 3 356.545108 1066.61349 99626.02 0.012163 4.3368E-06 -0.064608 -2.3036E-05 -0.052444 -1.8699E-05 356.544970774154 359.88121689702 60.887 1.0506 60.887 60.562 61.613 3.8147E-06 410 96 8 0 0 0 0.0021603 2 35618 52.482 30.245 1 0.93012 1.0703 0 210560000 112160000 98405000 9726 891 3687 3787 15265;15266 15266 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 356.5452 3 356.545108 1066.61349 NaN NaN NaN -0.070026 -2.4967E-05 NaN NaN NaN NaN 61.698 0.78137 61.698 61.527 62.308 0 0 0 0 0.0020267 1 36082 71.692 45.308 1 NaN NaN 0 69483000 69483000 0 9727 891 3687 3787 15267 15267 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.3142 2 534.314023 1066.61349 81973.14 0.3893 0.00020801 -0.29028 -0.0001551 0.099028 5.2912E-05 534.31394331907 539.317922882301 72.033 1.2957 72.033 71.622 72.918 0 684 99 10 0 0 0 1.0629E-05 3 38295 126.52 88.794 1 1.0665 0.92676 0 253710000 113540000 140170000 9728 891 3687 3787 15268;15269;15270 15270 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 356.5449 3 356.545108 1066.61349 99243.8 -0.088377 -3.151E-05 0.022384 7.981E-06 -0.065993 -2.3529E-05 356.545054043689 359.881158361847 72.091 1.1031 72.091 71.714 72.817 0 444 85 8 0 0 0 0.012605 2 37922 34.387 20.578 1 1.1034 0.95065 0 63919000 29952000 33966000 9729 891 3687 3787 15271;15272 15271 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.3184 2 534.314023 1066.61349 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.274 1 73.274 72.774 73.774 0 0 0 0 0.011752 1 38765 61.962 33.788 1 9730 891 3687 3787 15273 15273 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.3182 2 534.314023 1066.61349 81568.31 0.15948 8.5211E-05 -0.2116 -0.00011306 -0.052128 -2.7853E-05 534.31402754549 539.317979993761 72 1.4031 72 71.608 73.011 0 755 113 10 0 0 0 1.9856E-17 4 37049 168.23 124.43 1 1.013 0.88487 0 228740000 101170000 127570000 9731 891 3687 3787 15274;15275;15276;15277 15274 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 359.8812 3 356.545108 1066.61349 99162.82 -0.34379 -0.00012258 0.3176 0.00011324 -0.026193 -9.339E-06 356.545183116441 359.881271626103 72.091 1.2083 72.091 71.653 72.861 0 477 98 9 0 0 0 0.061765 1 37090 16.671 8.261 1 1.028 0.89705 0 68401000 35158000 33243000 9732 891 3687 3787 15278 15278 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.3184 2 534.314023 1066.61349 83354.32 0.44756 0.00023914 0.13799 7.3732E-05 0.58555 0.00031287 534.313902439143 539.3180815188 73.191 1.1357 73.191 72.898 74.034 7.6294E-06 259 81 8 0 0 0 0.0089883 1 37959 60.59 45.923 1 0.98221 0.81759 0 7175500 3590200 3585300 9733 891 3687 3787 15279 15279 ESTQLSPADLTEGKPTDPSK 20 2 0 Unmodified _ESTQLSPADLTEGKPTDPSK_ 0 0 1 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.6922 3 701.014696 2100.02226 72378.76 0.62459 0.00043785 -0.32953 -0.00023101 0.29506 0.00020684 701.014102011664 706.691769947736 61.032 0.71842 61.032 60.709 61.427 3.8147E-06 281 52 8 0 0 0 6.0088E-07 1 34899 75.533 75.533 1 1.9565 2.3102 0 36582000 11844000 24738000 9734 1694 3688 3788 15280 15280 ESTQLSPADLTEGKPTDPSK 20 2 0 Unmodified _ESTQLSPADLTEGKPTDPSK_ 0 0 1 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.3571 3 701.014696 2100.02226 72345.55 0.63804 0.00044727 -0.17967 -0.00012595 0.45836 0.00032132 701.014460146771 706.35726800822 60.011 0.66613 60.011 59.669 60.335 0 304 47 9 0 0 0 6.2003E-05 1 34852 41.798 41.798 1 2.125 2.4633 0 67337000 22121000 45216000 9735 1694 3688 3788 15281 15281 ESTQLSPADLTEGKPTDPSK 20 2 0 Unmodified _ESTQLSPADLTEGKPTDPSK_ 0 0 1 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.3582 3 701.014696 2100.02226 71485.7 0.34414 0.00024125 -0.031119 -2.1815E-05 0.31303 0.00021944 701.682818724396 706.357477288326 70.771 0.49364 70.771 70.51 71.004 0 148 32 7 0 0 0 0.00043 1 37118 35.703 35.703 1 1.7138 1.4788 0 5120500 1650100 3470400 9736 1694 3688 3788 15282 15282 ESTYQGHHTPPVQK 14 1 0 Unmodified _ESTYQGHHTPPVQK_ 0 0 0 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A0A075X871 A0A075X871 COX3;COIII;CO3;cox3;coxIII;MT-CO3 Cytochrome c oxidase subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.6021 3 536.930349 1607.76922 82303.12 0.81744 0.00043891 0.052513 2.8196E-05 0.86996 0.00046711 537.264777350012 539.601621401717 16.447 0.32405 16.447 16.306 16.63 0 91 14 9 0 0 0 2.4452E-05 2 3769 80.96 60.852 1 1.2666 1.3245 0 15099000 7295700 7803100 9737 2 3689 3789 15283;15284 15283 ESTYQGHHTPPVQK 14 1 0 Unmodified _ESTYQGHHTPPVQK_ 0 0 0 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A0A075X871;A0A059QTG6;H9E795;A0A075X6R4;H9E7H3;H9E7J9;Q5Y0G2;Q5Y0J7;Q5Y0H4;Q5Y0F3;Q5Y0E5;Q5Y078;Q5Y070;Q5Y065;Q5Y011;Q5XZY3;Q5XZX9;Q5XZT6;Q5XZR9;Q5XZP7;Q5XZL8;Q5XZK9;Q5XZI9;Q5XZI8;Q5XZI3;Q5XZI2;Q5XZH6;B4YCG0;T1Q6R9;T1Q5Q2;T1Q5P3;T1Q5B9;S4T6M3;Q9B2X0;Q9B2W9;Q9B2U6;Q9B1S6;Q9B1S4;Q8WCY1;Q8HNQ7;Q85L10;Q85L04;Q85KZ1;Q85KW2;Q85KW0;Q7YEF1;Q7YCF3;Q7YCE5;Q7YCE0;Q7YCC7;Q7Y664;Q6WQG6;Q6WQA1;Q6RRW7;Q6RPE6;Q6RMU0;Q6RLY3;Q6R0W6;Q6R0Q1;Q5SB31;Q5SAG0;Q4F2U0;Q4F2A8;Q4F1I5;Q4F0T8;Q4F0P9;Q4EZD1;Q4EXJ4;Q4EWP5;Q305X3;Q305K6;Q305I0;Q27H55;Q15IP0;Q15II8;Q0Z7G1;Q0Z7D5;Q0G899;I6N522;F1AKZ3;F1AK70;E0Y4D8;D7P622;D7NV03;D3K5V4;D0V1V1;C7B3W9;C7B321;B7TMW4;B5M8C0;B4YBC2;B4F441;B3VEA5;B2Z642;B2Z5S5;B2XNX9;B2XNQ1;B2XMF0;B2XGB4;B2XFT2;B2XEN1;B2XEK5;B2WRF9;B1NVE6;A8JLT5;A6ZFQ8;A6ZDK7;A6ZC77;A6ZBW0;A6ZB50;A6Z9S0;A6Z9Q7;A6Z8Z7;A6Z8G5;A6Z809;A6Z708;A6Z460;A6Z2T0;A6YZY0;A6YX95;A6YWQ1;A6YW19;A1DV22;A1DUU4;A0SD91;A0A1S6M0V0;A0A0R4PYF0;A0A0R4PX57;A0A0N6YRH7;A0A0E3D7H3;X5CKC7;X5CAY7;X5CAG3;X5C9X5;X5C9F1;X5C127;X5BXV3;X2CLI8;W8DJM3;W8DE98;W8DDQ7;W0C1D3;V9N9G5;V9JJC5;V9JEP3;V9JBV1;V9J277;V5N323;V5LA48;V5JMB0;U5ZAB9;U5Z242;U5YV97;U3LQZ1;U3LB43;U3L8W6;U3L7D7;U3L3K7;S4WYR4;S4V7D6;S4UQJ2;R9YA13;R9Y6C9;R9Y4I8;R9Y2C7;R9XZ24;Q7GIM7;Q6VLN4;Q6VKA3;Q6VJ16;Q6VIM0;Q6VIH5;Q6VIB9;Q6VHA9;Q6VH99;Q5XSC1;Q4ZF68;Q4ZEF8;Q4ZED2;Q4ZEA6;Q4VFD0;Q4GV60;Q4GU59;Q4GSY0;Q4GPN6;Q4GPI4;Q4GMA4;Q4GIY4;Q4GIA0;Q4GI22;Q4GG20;Q4GFE9;Q4GC16;Q4GBF8;Q4G9U9;Q4G7C8;Q4G6V9;Q4G6P4;Q3S961;Q2HKT7;Q2HKI3;Q2HKH0;Q2HJS3;Q19MP4;Q15HG3;Q15H46;Q0ZFF5;Q0VXC5;N0BUK3;M1LF78;L7XY70;L7XNA1;L7XHF6;L7XE90;L7XE42;L7SJG0;L7SDS5;L0E7R8;K9R3V8;K9MXE4;K7X9W4;K7DVY4;K4GWK0;J7HNV9;J7H4R4;I6V941;I3Q9B3;I3Q7D7;I3Q632;I3Q1J6;I3PZU8;I3PX88;H9T5S2;H9T437;H9SVZ0;H9SN86;H9SMZ5;H9SHR2;H9SGP8;H9SGF7;H9SEK7;H9S0W7;H9RPS2;H9RMG7;H9RLV9;H9RAK7;H9R4P0;H9R484;H9QZW3;H9QYR0;H9QWF4;H9QVE0;H9QRZ4;H9QQ96;H9QP82;H9QNT9;H9QNC0;H9QIJ3;H9QDS9;H9Q8W3;H9Q589;H9Q2D8;H9PV14;H9PS37;H9PIE5;H9PG91;H9PBU4;H9P9C3;H9P818;H9P593;H9P2S2;H9NYP2;H9NYK3;H9NV96;H9NU95;H9NS67;H9NRT7;H9NQ52;H9MXE9;H9M5G1;H9E7U0;H9E7N8;H9E7L2;H9E7I6;H9E7G0;H9E782;H9A8A3;H6WIW4;H6WIB9;H6WGK8;G9LLZ5;G9LF53;G9LCP5;G8JEA2;G8JB19;G5D8N5;G5D8J6;G5D8E4;G5D8B8;G5D827;G5D7X5;G4W4F2;G4W2K2;G4VYZ1;G3EBM6;G3EBI7;G3EBC2;G3CA52;G3C9Y7;G1FK61;F8V9Z2;F6M8I7;F2WN35;F2WIP2;F2WID8;F2WHZ5;F2WHP1;F2WG19;F2WFE8;F2WEE7;F1KL87;F1KCG8;F1DLM3;F1CIL3;F1CI70;F1B6Q7;F1B675;E9LB22;E9LAC5;E7E4G9;E7E3Q9;E7CNJ7;E7CM99;E7CLZ5;E5LFL6;E5EY89;E5E1P4;E5E1I7;E5E1D5;E5E0U0;E5DYD2;E5DY67;E2J0C2;E2FQB7;E1B320;D6N765;D6N462;D6C3F2;D6BZS8;D4IH23;D1GI28;C9D5W0;C8YGY6;C8Y5S3;C8Y3W0;C8XZH6;C7SKT4;C7SJU6;C5MM24;C4RU97;C4PK82;B8XZS7;B8X4N0;B8RFL3;B4YGV7;B3DE35;B2ZNN0;B2YAW2;B2KLD8;B2CB92;B2CB40;B1W7S8;B1W6U0;B0Z7E9;B0Z745;B0Z6N9;B0EWB5;A8WFB7;A7XTZ1;A7LFE4;A7LDP6;A4ZMW5;A4ZMF9;A4ZLS9;A4ZLI8;A4ZLD6;A3RM82;A1DTV1;A1DTL0;A1DTJ7;A0A1S6P8I0;A0A1S6NF74;A0A1S6MWY7;A0A1S6M8U8;A0A1S6LZ79;A0A1J0QPU7;A0A1J0QF46;A0A1J0Q6T5;A0A1J0PT73;A0A1B1LLR5;A0A1B1CX69;A0A193DRQ4;A0A143FYM1;A0A141ZSN7;A0A141ZSL1;A0A140DGE8;A0A140DG57;A0A0Y0LWT9;A0A0S2IAR5;A0A0K1Z5H7;A0A0K1HQG2;A0A0G3FFE5;A0A0G2UR35;A0A0E3T332;A0A0E3T2A4;A0A0E3M2L1;A0A0E3JM36;A0A0C5B7S7;A0A097QDD8;A0A097Q7A4;A0A097Q5K4;A0A097Q1S3;A0A097Q0W3;A0A097PZZ2;A0A096YC77;A0A096X3H2;A0A096WXN1;A0A096WNK8;A0A096WNG4;A0A096WAQ9;A0A096W9H4;A0A088FT95;A0A075C7G6;A0A068C314;A0A068C1X3;A0A068BWL1;A0A068BSM3;A0A068BLJ0;A0A059SF52;A0A059S9H9;A0A059S1K3;A0A059RYZ4;A0A059RWN6;A0A059RWD2;A0A059RW26;A0A059RVV1;A0A059RV52;A0A059RV13;A0A059RUW7;A0A059RTY0;A0A059RTN7;A0A059RSR4;A0A059RSL9;A0A059RSE7;A0A059RSC2;A0A059RSC0;A0A059RS90;A0A059RS36;A0A059RRZ0;A0A059RR81;A0A059RR60;A0A059RQG8;A0A059RPC5;A0A059RP63;A0A059RNY9;A0A059RNV0;A0A059RNN3;A0A059RMZ2;A0A059RMR4;A0A059RME4;A0A059RLQ9;A0A059RLC3;A0A059RKX0;A0A059RK35;A0A059RK12;A0A059RJ07;A0A059RID7;A0A059RHW4;A0A059RHP6;A0A059RHB6;A0A059RGW3;A0A059RC73;A0A059R8Y9;A0A059R879;A0A059R5A7;A0A059R342;A0A059QTP8;A0A059QTI8;A0A059QT91;A0A059QSW1;A0A059QSS8;A0A059QSG6;A0A059QRQ4;A0A059QQR4;A0A059QQF2;A0A059QPY1;A0A059QP57;A0A059QP19;A0A059QP15;A0A059QNP6;A0A059QNN3;A0A059QMM8;A0A059QMC6;A0A059QLT7;A0A059QJU5;A0A059QJQ7;A0A059QJI7;A0A059QIM7;A0A059QGM3;A0A059QFL5;A0A059QF86;A0A059QDR4;A0A059QDQ3;A0A059QD68;A0A059QB52;A0A023R2W4;A0A023QW72;A0A023QSW5;A0A023QKT8;A0A023Q4K2;T2HQ00;T2HNX6;T2HLZ8;T2HLK2;T2HLG2;T2HKR7;T2HKR6;T2HKD7;E7AXU6;B9EF90;B9EEI0;B9EEE1;B9EE11;B9ECT2;I7H1S4;P00414 A0A075X871 A0A075X871 COX3;COIII;CO3;cox3;coxIII;MT-CO3 Cytochrome c oxidase subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.9357 3 536.930349 1607.76922 82356.4 0.11848 6.3615E-05 -0.38062 -0.00020437 -0.26214 -0.00014075 536.930308965889 539.601512941044 17.177 0.25336 17.177 17.066 17.319 0 116 20 9 0 0 0 0.0008683 1 3293 47.774 47.774 1 1.9153 1.5268 0 3093400 1167500 1925900 9741 2 3689 3789 15289 15289 ESVDGQWVCISDVNK 15 1 0 Unmodified _ESVDGQWVCISDVNK_ 0 0 0 Q53GB2;A0A0C4DFR6;P55735 Q53GB2 Q53GB2 SEC13 Protein SEC13 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.4114 2 868.401426 1734.7883 NaN NaN NaN 0.55209 0.00047943 NaN NaN NaN NaN 85.704 0.22182 85.704 85.568 85.79 0 0 0 0 0.0018829 1 51484 64.55 57.891 1 NaN NaN 0 2285500 0 2285500 9742 506 3690 3790 15290 15290 ESVDGQWVCISDVNK 15 1 0 Unmodified _ESVDGQWVCISDVNK_ 0 0 0 Q53GB2;A0A0C4DFR6;P55735 Q53GB2 Q53GB2 SEC13 Protein SEC13 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.4097 2 868.401426 1734.7883 NaN NaN NaN 0.11329 9.8382E-05 NaN NaN NaN NaN 84.967 0.24598 84.967 84.85 85.096 0 0 0 0 0.045399 1 52153 37.681 31.021 1 NaN NaN 0 4886700 0 4886700 9743 506 3690 3790 15291 15291 ESVDLPEEK 9 1 0 Unmodified _ESVDLPEEK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.263 2 523.256037 1044.49752 83334.41 0.48654 0.00025458 1.1154 0.00058363 1.6019 0.00083821 523.255984835245 527.263169826853 40.636 0.81635 40.636 40.189 41.005 0 234 71 6 0 0 0 0.00087455 2 21218 93.143 93.143 1 1.223 1.3385 0 51891000 22720000 29171000 9744 1945 3691 3791 15292;15293 15292 ESVDLPEEK 9 1 0 Unmodified _ESVDLPEEK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2567 2 523.256037 1044.49752 83831.65 0.67635 0.0003539 1.2265 0.00064179 1.9029 0.00099569 523.256061505854 527.263273492193 39.65 0.73774 39.65 39.29 40.028 -3.8147E-06 173 64 7 0 0 0 3.4163E-05 2 20980 112.41 104.84 1 1.2977 1.4552 0 113430000 56395000 57031000 9745 1945 3691 3791 15294;15295 15295 ESVFFAEPPFK 11 1 0 Unmodified _ESVFFAEPPFK_ 0 0 0 Q9P0K7;B4DNL3 Q9P0K7 Q9P0K7 RAI14 Ankycorbin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.3365 2 649.326796 1296.63904 NaN NaN NaN 0.15483 0.00010054 NaN NaN NaN NaN 108.37 0.52743 108.37 108.05 108.58 -7.6294E-06 0 0 0 0.013486 1 67597 55.064 43.017 1 NaN NaN 0 5890800 0 5890800 9746 2093 3692 3792 15296 15296 ESVFTVEGGHR 11 0 1 Unmodified _ESVFTVEGGHR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.3032 2 609.299101 1216.58365 76255.72 0.66231 0.00040355 0.020111 1.2254E-05 0.68242 0.0004158 609.2990710248 614.303201443931 37.223 0.91082 37.223 36.785 37.696 0 429 79 8 0 0 0 1.4269E-05 3 18730 107.15 91.894 1 1.5138 1.7916 0 344270000 140590000 203680000 9747 1328 3693 3793 15297;15298;15299 15297 ESVFTVEGGHR 11 0 1 Unmodified _ESVFTVEGGHR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.2996 2 609.299101 1216.58365 76605.66 0.50709 0.00030897 0.11763 7.1673E-05 0.62473 0.00038064 609.299139021933 614.303262622201 35.924 0.744 35.924 35.702 36.446 0 394 61 8 0 0 0 2.4133E-12 2 18313 139.98 124.83 1 1.5301 1.7747 0 316220000 116280000 199940000 9748 1328 3693 3793 15300;15301 15301 ESVFTVEGGHR 11 0 1 Unmodified _ESVFTVEGGHR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.3034 2 609.299101 1216.58365 76562.35 0.3206 0.00019534 0.12413 7.563E-05 0.44472 0.00027097 609.299218613465 614.30322120571 41.903 1.0918 41.903 41.408 42.499 0 397 87 9 0 0 0 0.0020164 1 19740 63.076 58.428 1 2.4571 2.0685 0 27688000 7799700 19889000 9749 1328 3693 3793 15302 15302 ESVFTVEGGHR 11 0 1 Unmodified _ESVFTVEGGHR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.3035 2 609.299101 1216.58365 77140.49 0.16394 9.9891E-05 0.21678 0.00013208 0.38072 0.00023198 609.299224644712 614.303255211051 41.899 1.2718 41.899 41.446 42.717 0 414 93 8 0 0 0 2.8475E-06 3 18871 111.61 99.56 1 2.589 2.2456 0 23894000 6349300 17545000 9750 1328 3693 3793 15303;15304;15305 15303 ESVHLETYPK 10 1 0 Unmodified _ESVHLETYPK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.8149 2 601.806228 1201.5979 79312.15 0.69136 0.00041607 0.039714 2.39E-05 0.73108 0.00043997 601.806276643424 606.314888834787 36.531 0.30096 36.531 36.419 36.72 -3.8147E-06 72 27 4 0 0 0 1.8015E-08 2 18498 122.28 122.28 1 0.73574 0.73382 0 7878000 4114300 3763700 9751 1990 3694 3794 15306;15307 15307 ESVLIISTDPAHNISDAFDQK 21 1 0 Unmodified _ESVLIISTDPAHNISDAFDQK_ 0 0 0 A0A087WXS7;O43681;K7ERW9;B4DEE5 A0A087WXS7 A0A087WXS7 ASNA1 ATPase ASNA1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.055 3 767.385012 2299.13321 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.03 1 109.03 108.53 109.53 7.6294E-06 0 0 0 3.6659E-05 1 68190 68.639 53.047 1 9752 431 3695 3795 15308 15308 ESVLIISTDPAHNISDAFDQK 21 1 0 Unmodified _ESVLIISTDPAHNISDAFDQK_ 0 0 0 A0A087WXS7;O43681;K7ERW9;B4DEE5 A0A087WXS7 A0A087WXS7 ASNA1 ATPase ASNA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.0573 3 767.385012 2299.13321 69955.11 0.70537 0.00054129 0.23515 0.00018045 0.94052 0.00072174 767.719803542176 770.39088639421 108.34 0.4175 108.34 108.13 108.55 0 78 27 6 0 0 0 2.4157E-08 1 69330 69.986 69.986 1 3.8013 3.8445 0 8886100 2690600 6195500 9753 431 3695 3795 15309 15309 ESVLQMMQAGQR 12 0 1 2 Oxidation (M) _ESVLQM(ox)M(ox)QAGQR_ ESVLQM(1)M(1)QAGQR ESVLQM(97.64)M(97.64)QAGQR 0 2 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;A4VCH6 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3351 2 705.329218 1408.64388 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.894 1 26.894 26.394 27.394 0 0 0 0 1.1354E-06 1 12205 97.635 78.855 1 9754 946 3696 3796 15310 15310 769;770 ESVLQMMQAGQR 12 0 1 2 Oxidation (M) _ESVLQM(ox)M(ox)QAGQR_ ESVLQM(1)M(1)QAGQR ESVLQM(76.22)M(76.22)QAGQR 0 2 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;A4VCH6 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.8735 2 705.329218 1408.64388 NaN NaN NaN 0.42028 0.00029644 NaN NaN NaN NaN 26.574 0.41073 26.574 26.29 26.701 -1.9073E-06 0 0 0 0.00030279 1 11931 76.221 58.786 1 NaN NaN 0 5783600 0 5783600 9755 946 3696 3796 15311 15311 769;770 ESVLTATSILNNPIVK 16 1 0 Unmodified _ESVLTATSILNNPIVK_ 0 0 0 Q5BKZ1;A0A0A0MRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.9934 2 849.985452 1697.95635 68172.39 0.7885 0.00067021 -0.0061762 -5.2497E-06 0.78232 0.00066496 849.985878393194 853.992691100142 117.37 0.35564 117.37 117.19 117.55 7.6294E-06 100 24 6 0 0 0 0.00012839 1 75147 77.124 77.124 1 1.7328 1.7198 0 8157300 3277300 4880100 9756 1804 3697 3797 15312 15312 ESVLTATSILNNPIVK 16 1 0 Unmodified _ESVLTATSILNNPIVK_ 0 0 0 Q5BKZ1;A0A0A0MRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 854.4928 2 849.985452 1697.95635 69085.3 0.77845 0.00066167 -0.069442 -5.9025E-05 0.70901 0.00060265 849.986047514697 853.992878562761 116.83 0.32821 116.83 116.69 117.02 7.6294E-06 83 19 6 0 0 0 0.00023457 1 76615 58.274 58.274 1 1.6535 1.6834 0 9204400 3338700 5865800 9757 1804 3697 3797 15313 15313 ESVLTATSILNNPIVK 16 1 0 Unmodified _ESVLTATSILNNPIVK_ 0 0 0 Q5BKZ1;A0A0A0MRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 853.993 2 849.985452 1697.95635 68688.87 0.78629 0.00066833 0.28649 0.00024351 1.0728 0.00091184 849.985738731191 853.992707654509 129.54 0.38045 129.54 129.34 129.72 1.5259E-05 79 16 8 0 0 0 0.020874 1 78315 28.283 28.283 1 1.4692 1.1416 0 3613000 1370300 2242700 9758 1804 3697 3797 15314 15314 ESVLTWLLK 9 1 0 Unmodified _ESVLTWLLK_ 0 0 0 Q15058 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.8283 2 544.82115 1087.62775 91100.86 0.7472 0.00040709 0.2198 0.00011975 0.967 0.00052684 544.821065909659 548.828147246225 123.74 0.30377 123.74 123.58 123.89 0 44 20 5 0 0 0 0.020683 1 82165 50.04 42.1 1 1.3318 1.47 0 2593200 1194900 1398300 9759 1751 3698 3798 15315 15315 ESVLVEWR 8 0 1 Unmodified _ESVLVEWR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.2708 2 509.271824 1016.5291 84145.14 0.6839 0.00034829 -0.19814 -0.00010091 0.48576 0.00024738 509.271651938686 514.275752979402 80.435 0.91978 80.435 79.978 80.897 0 279 78 5 0 0 0 0.0087985 1 47669 77.072 32.305 1 0.75457 0.79342 0 39741000 22408000 17333000 9760 716 3699 3799 15316 15316 ESVLVEWR 8 0 1 Unmodified _ESVLVEWR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2719 2 509.271824 1016.5291 84847.43 0.47591 0.00024237 0.1053 5.3625E-05 0.58121 0.00029599 509.271692840395 514.276071988112 79.21 0.81953 79.21 78.81 79.629 0 252 69 5 0 0 0 0.009998 2 48101 73.248 33.943 1 0.83038 0.92957 0 44958000 23926000 21032000 9761 716 3699 3799 15317;15318 15318 ESYDDVSSFR 10 0 1 Unmodified _ESYDDVSSFR_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.7592 2 602.759475 1203.5044 77850.86 0.36604 0.00022063 0.32109 0.00019354 0.68712 0.00041417 602.759532787695 607.763696318946 53.042 0.98924 53.042 52.68 53.669 0 462 74 9 0 0 0 3.7732E-16 2 29534 154.28 154.28 1 0.92008 1.0888 0 333780000 172780000 161000000 9762 1316 3700 3800 15319;15320 15320 ESYDDVSSFR 10 0 1 Unmodified _ESYDDVSSFR_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.7601 2 602.759475 1203.5044 77992.48 0.54753 0.00033003 0.19422 0.00011707 0.74175 0.0004471 602.759499049708 607.763609242057 51.978 1.1707 51.978 51.471 52.642 0 553 92 8 0 0 0 6.3643E-13 2 29433 149.82 148.21 1 0.88412 1.0232 0 274100000 141530000 132580000 9763 1316 3700 3800 15321;15322 15322 ESYDDVSSFR 10 0 1 Unmodified _ESYDDVSSFR_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.7641 2 602.759475 1203.5044 78236.05 0.44583 0.00026873 0.24394 0.00014704 0.68977 0.00041576 602.759567231784 607.763705118219 61.765 1.4071 61.765 61.139 62.547 0 691 115 9 0 0 0 0.00022723 3 31826 93.178 88.213 1 0.9775 0.83566 0 39020000 19058000 19962000 9764 1316 3700 3800 15323;15324;15325 15325 ESYDDVSSFR 10 0 1 Unmodified _ESYDDVSSFR_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.7593 2 602.759475 1203.5044 76888.62 0.38009 0.0002291 0.20957 0.00012632 0.58966 0.00035542 602.759495525149 607.763685485761 62.479 1.0248 62.479 61.916 62.941 0 485 74 8 0 0 0 0.010853 2 31195 52.79 52.159 1 0.9539 0.83205 0 39962000 20528000 19434000 9765 1316 3700 3800 15326;15327 15327 ESYDYNPNK 9 1 0 Unmodified _ESYDYNPNK_ 0 0 0 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.2435 2 565.24346 1128.47237 80962.9 0.53165 0.00030051 -0.1919 -0.00010847 0.33975 0.00019204 565.243352227231 569.250546943692 23.438 0.50177 23.438 23.164 23.666 0 93 23 7 0 0 0 0.0011168 1 9306 89.752 89.752 1 1.2859 1.2655 0 23972000 11766000 12206000 9766 1407 3701 3801 15328 15328 ESYSIYVYK 9 1 0 Unmodified _ESYSIYVYK_ 0 0 0 Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.294 2 576.284597 1150.55464 NaN NaN NaN 1.3327 0.00076804 NaN NaN NaN NaN 73.229 0.54585 73.229 72.992 73.538 0 0 0 0 0.046103 1 44129 48.283 36.514 1 NaN NaN 0 6352300 0 6352300 9767 1513 3702 3802 15329 15329 ESYSIYVYK 9 1 0 Unmodified _ESYSIYVYK_ 0 0 0 Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.2851 2 576.284597 1150.55464 NaN NaN NaN 1.2652 0.00072911 NaN NaN NaN NaN 80.351 4.8659 80.351 79.897 84.763 0 0 0 0 0.0047626 3 43290 75.738 54.21 1 NaN NaN 0 846480000 846480000 0 9768 1513 3702 3802 15330;15331;15332 15330 ESYSIYVYK 9 1 0 Unmodified _ESYSIYVYK_ 0 0 0 Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.285 2 576.284597 1150.55464 NaN NaN NaN 1.0999 0.00063388 NaN NaN NaN NaN 80.595 3.5326 80.595 80.19 83.723 0 0 0 0 0.0047626 3 42612 75.738 54.21 1 NaN NaN 0 790680000 790680000 0 9769 1513 3702 3802 15333;15334;15335 15333 ESYSIYVYK 9 1 0 Unmodified _ESYSIYVYK_ 0 0 0 Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.2925 2 576.284597 1150.55464 NaN NaN NaN 0.59178 0.00034103 NaN NaN NaN NaN 84.794 1.2689 84.794 84.229 85.498 7.6294E-06 0 0 0 0.054179 1 45268 45.68 36.092 1 NaN NaN 0 1666700 0 1666700 9770 1513 3702 3802 15336 15336 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.2845 2 569.276772 1136.53899 83075.82 0.53668 0.00030552 0.041166 2.3435E-05 0.57785 0.00032895 569.276485100292 573.283832036721 54.144 0.42707 54.144 53.889 54.316 0 135 34 6 0 0 0 0.0028653 1 30352 73.248 47.143 1 0.79109 0.82095 0 14815000 6944200 7871200 9771 34 3703 3803 15337 15337 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.2845 2 569.276772 1136.53899 80414.25 0.57512 0.0003274 0.26266 0.00014953 0.83778 0.00047693 569.77844059731 573.283707618275 68.276 1.2513 68.276 67.831 69.083 -7.6294E-06 232 110 4 0 0 0 0.0060214 1 39396 65.246 44.621 1 0.9259 0.96264 0 11490000 5427100 6063200 9772 34 3703 3803 15338 15338 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.2769 2 569.276772 1136.53899 NaN NaN NaN 0.40484 0.00023046 NaN NaN NaN NaN 59.902 5.2912 59.902 59.377 64.668 0 0 0 0 0.0019632 7 33856 83.265 60.969 1 NaN NaN 0 9511100000 9511100000 0 9773 34 3703 3803 15339;15340;15341;15342;15343;15344;15345 15339 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.2767 2 569.276772 1136.53899 NaN NaN NaN -0.18877 -0.00010746 NaN NaN NaN NaN 67.016 2.0805 67.016 66.348 68.428 7.6294E-06 0 0 0 0.0079467 3 39255 69.198 46.706 1 NaN NaN 0 10491000 10491000 0 9774 34 3703 3803 15346;15347;15348 15348 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.2843 2 569.276772 1136.53899 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.308 1 64.308 63.808 64.808 0 0 0 0 0.011603 1 36950 62.107 34.225 1 9775 34 3703 3803 15349 15349 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.2789 2 569.276772 1136.53899 NaN NaN NaN 1.0229 0.00058229 NaN NaN NaN NaN 29.929 0.45646 29.929 29.581 30.037 1.9073E-06 0 0 0 0.0092921 1 14567 67.277 41.383 1 NaN NaN 0 5299500 5299500 0 9776 34 3703 3803 15350 15350 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.277 2 569.276772 1136.53899 NaN NaN NaN 0.30413 0.00017314 NaN NaN NaN NaN 58.509 5.2919 58.509 58.227 63.519 -3.8147E-06 0 0 0 0.00014023 7 36398 96.492 59.935 1 NaN NaN 0 8903200000 8903200000 0 9777 34 3703 3803 15351;15352;15353;15354;15355;15356;15357 15356 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.2776 2 569.276772 1136.53899 NaN NaN NaN -1.93 -0.0010987 NaN NaN NaN NaN 65.142 0.42795 65.142 64.984 65.412 0 0 0 0 0.035719 1 38316 51.63 34.004 1 NaN NaN 0 9335400 9335400 0 9778 34 3703 3803 15358 15358 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.2776 2 569.276772 1136.53899 NaN NaN NaN -0.17155 -9.7657E-05 NaN NaN NaN NaN 65.748 0.58739 65.748 65.4 65.987 0 0 0 0 0.0066422 1 38816 71.877 46.74 1 NaN NaN 0 10119000 10119000 0 9779 34 3703 3803 15359 15359 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.2761 2 569.276772 1136.53899 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.348 1 82.348 81.848 82.848 0 0 0 0 0.052771 1 50398 45.68 25.69 1 9780 34 3703 3803 15360 15360 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.2761 2 569.276772 1136.53899 81990.04 0.28009 0.00015945 0.51453 0.00029291 0.79462 0.00045236 569.276805298243 573.785724753868 63.23 0.54128 63.23 62.94 63.482 -3.8147E-06 143 48 4 0 0 0 0.03089 1 32466 45.68 33.396 1 0.80354 0.63469 0 4114900 2145900 1968900 9781 34 3703 3803 15361 15361 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.2766 2 569.276772 1136.53899 NaN NaN NaN 0.76712 0.0004367 NaN NaN NaN NaN 69.532 7.0506 69.532 69.294 76.345 0 0 0 0 0.001313 7 36360 86.833 63.309 1 NaN NaN 0 1562100000 1562100000 0 9782 34 3703 3803 15362;15363;15364;15365;15366;15367;15368 15362 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.2775 2 569.276772 1136.53899 NaN NaN NaN 0.84204 0.00047935 NaN NaN NaN NaN 70.232 6.6134 70.232 69.803 76.416 0 0 0 0 0.00011703 6 35920 98.523 79.741 1 NaN NaN 0 1420800000 1420800000 0 9783 34 3703 3803 15369;15370;15371;15372;15373;15374 15369 ESYSVYVYKVLK 12 2 0 Unmodified _ESYSVYVYKVLK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.4011 2 739.400492 1476.78643 71626.52 0.77146 0.00057042 0.72616 0.00053692 1.4976 0.0011073 739.902071566095 747.415499267272 88.951 0.67062 88.951 88.482 89.153 0 162 50 5 0 0 0 3.5287E-05 1 53543 109.66 94.034 1 0.8956 1.0625 0 26834000 11762000 15072000 9784 34 3704 3804 15375 15375 ESYSVYVYKVLK 12 2 0 Unmodified _ESYSVYVYKVLK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.4027 2 739.400492 1476.78643 72267.69 0.66812 0.00049401 1.1711 0.00086593 1.8392 0.0013599 739.401085120388 747.416298345202 87.363 0.59296 87.363 87.159 87.752 7.6294E-06 124 39 4 0 0 0 0.0012047 1 53772 74.165 74.165 1 0.9099 1.0394 0 14538000 7635800 6901700 9785 34 3704 3804 15376 15376 ESYTEEIVSEAESHVSGISR 20 0 1 Unmodified _ESYTEEIVSEAESHVSGISR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.6846 3 737.013355 2208.01824 70632.81 0.69284 0.00051063 0.067479 4.9733E-05 0.76032 0.00056037 737.013420362274 740.349546403248 108.08 0.73224 108.08 107.68 108.41 7.6294E-06 370 54 9 0 0 0 2.553E-06 2 67197 49.528 45.341 1 0.92198 1.0232 0 68942000 39465000 29477000 9786 1813 3705 3805 15377;15378 15377 ESYTEEIVSEAESHVSGISR 20 0 1 Unmodified _ESYTEEIVSEAESHVSGISR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1105.0181 2 1105.01639 2208.01824 58434.46 0.11204 0.0001238 0.40027 0.0004423 0.51231 0.00056611 1105.51875601902 1110.52208186507 108.11 0.53128 108.11 107.77 108.31 7.6294E-06 170 39 7 0 0 0 6.4601E-09 2 67355 118.13 113.33 1 0.932 0.95706 0 25623000 12722000 12901000 9787 1813 3705 3805 15379;15380 15380 ESYTEEIVSEAESHVSGISR 20 0 1 Unmodified _ESYTEEIVSEAESHVSGISR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.3498 3 737.013355 2208.01824 71193.21 0.90655 0.00066814 -0.10202 -7.5191E-05 0.80453 0.00059295 737.347658640205 740.349334477196 107.39 0.64625 107.39 107.1 107.75 0 314 44 10 0 0 0 6.632E-07 2 68428 69.122 69.122 1 0.91436 1.0428 0 97010000 51668000 45342000 9788 1813 3705 3805 15381;15382 15382 ESYTEEIVSEAESHVSGISR 20 0 1 Unmodified _ESYTEEIVSEAESHVSGISR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1105.0176 2 1105.01639 2208.01824 57697.77 0.2719 0.00030045 0.17071 0.00018864 0.44261 0.00048909 1105.51872384002 1110.52195572093 107.33 0.53425 107.33 107.08 107.62 0 166 36 7 0 0 0 2.8524E-09 1 68468 117.2 111.12 1 0.94962 1.0397 0 30976000 13395000 17581000 9789 1813 3705 3805 15383 15383 ESYTEEIVSEAESHVSGISR 20 0 1 Unmodified _ESYTEEIVSEAESHVSGISR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.0151 3 737.013355 2208.01824 69683.77 0.99729 0.00073502 0.059234 4.3656E-05 1.0565 0.00077867 737.347771894699 740.349497380932 119.52 0.50793 119.52 119.25 119.76 0 144 21 11 0 0 0 0.019944 1 70653 19.31 19.236 1 1.5626 1.3489 0 87118000 35131000 51987000 9790 1813 3705 3805 15384 15384 ESYTEEIVSEAESHVSGISR 20 0 1 Unmodified _ESYTEEIVSEAESHVSGISR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1110.5231 2 1105.01639 2208.01824 57556.88 0.39086 0.00043191 0.35089 0.00038773 0.74174 0.00081964 1105.01691004328 1110.52255667685 119.52 0.48141 119.52 119.29 119.77 7.6294E-06 101 20 11 0 0 0 1.5448E-10 2 70795 127.71 123.15 1 1.2396 1.0309 0 21705000 9022400 12683000 9791 1813 3705 3805 15385;15386 15386 ESYTEEIVSEAESHVSGISR 20 0 1 Unmodified _ESYTEEIVSEAESHVSGISR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.6844 3 737.013355 2208.01824 70279.42 0.73036 0.00053829 -0.073314 -5.4034E-05 0.65705 0.00048425 737.347674391449 740.683712274772 119.27 0.58366 119.27 119.03 119.62 0 158 25 10 0 0 0 0.00047817 2 69616 34.65 33.383 1 1.4804 1.2919 0 70360000 28205000 42155000 9792 1813 3705 3805 15387;15388 15387 ESYTEEIVSEAESHVSGISR 20 0 1 Unmodified _ESYTEEIVSEAESHVSGISR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1110.5223 2 1105.01639 2208.01824 56764.32 0.14174 0.00015662 0.54628 0.00060365 0.68801 0.00076027 1105.51795337972 1110.52180723464 119.27 0.4924 119.27 119.09 119.58 0 116 21 8 0 0 0 2.241E-06 1 69643 94.673 93.658 1 1.026 0.88952 0 23775000 10939000 12836000 9793 1813 3705 3805 15389 15389 ETAEADVASLNR 12 0 1 Unmodified _ETAEADVASLNR_ 0 0 0 Q1ZYL5;F5H7S3;D9YZV7;H7BYY1;H0YK48;B7Z722;B7Z596;Q59GR8 Q1ZYL5 Q1ZYL5 TPM1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.3195 2 638.312406 1274.61026 NaN NaN NaN 0.54017 0.0003448 NaN NaN NaN NaN 43.442 0.20443 43.442 43.364 43.568 -3.8147E-06 0 0 0 0.029218 1 23275 47.844 32.979 1 NaN NaN 0 2307600 0 2307600 9794 1094 3706 3806 15390 15390 ETAEAYLGK 9 1 0 Unmodified _ETAEAYLGK_ 0 0 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2559 2 491.248015 980.481476 89142.58 0.38964 0.00019141 0.76135 0.00037401 1.151 0.00056542 491.248192541687 495.25562009955 36.208 0.59141 36.208 35.958 36.549 0 156 55 4 0 0 0 0.0089883 1 18259 60.59 37.161 1 0.91742 0.90575 0 19399000 9701700 9697500 9795 1466 3707 3807 15391 15391 ETAEAYLGK 9 1 0 Unmodified _ETAEAYLGK_ 0 0 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2554 2 491.248015 980.481476 87169.7 0.97055 0.00047678 0.72098 0.00035418 1.6915 0.00083096 491.248345293837 495.255181931436 35.217 0.54246 35.217 34.988 35.531 0 142 50 4 0 0 0 0.035569 1 17948 43.808 30.771 1 0.87339 0.94426 0 22536000 11879000 10658000 9796 1466 3707 3807 15392 15392 ETAENYLGHTAK 12 1 0 Unmodified _ETAENYLGHTAK_ 0 0 0 B7Z4V2;V9HW84;P38646;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3299 2 667.322773 1332.63099 73309.17 0.91132 0.00060815 0.0019821 1.3227E-06 0.91331 0.00060947 667.322655617911 671.32987901156 27.297 0.56062 27.297 26.978 27.538 -1.9073E-06 122 29 9 0 0 0 1.3826E-237 3 12486 321.23 303.17 1 2.3125 2.62 0 91463000 27134000 64329000 9797 1092 3708 3808 15393;15394;15395 15394 ETAENYLGHTAK 12 1 0 Unmodified _ETAENYLGHTAK_ 0 0 0 B7Z4V2;V9HW84;P38646;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.8893 3 445.217608 1332.63099 89272.22 0.3296 0.00014674 -0.27866 -0.00012406 0.050945 2.2682E-05 445.217333549941 447.889005263969 27.308 0.47044 27.308 26.996 27.467 0 62 23 5 0 0 0 0.0044884 1 12535 42.426 38.412 1 2.4867 2.7001 0 46259000 16772000 29487000 9798 1092 3708 3808 15396 15396 ETAENYLGHTAK 12 1 0 Unmodified _ETAENYLGHTAK_ 0 0 0 B7Z4V2;V9HW84;P38646;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3303 2 667.322773 1332.63099 71921.76 0.84492 0.00056383 0.15289 0.00010203 0.99781 0.00066586 667.322764245676 671.329820703924 26.778 0.47127 26.778 26.588 27.059 -1.9073E-06 101 21 9 0 0 0 2.063E-104 2 12102 249.83 233.64 1 2.1976 2.5378 0 193340000 60268000 133070000 9799 1092 3708 3808 15397;15398 15397 ETAENYLGHTAK 12 1 0 Unmodified _ETAENYLGHTAK_ 0 0 0 B7Z4V2;V9HW84;P38646;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.3297 2 667.322773 1332.63099 74222.63 0.51968 0.0003468 0.24569 0.00016396 0.76537 0.00051075 667.322805986392 671.329824342208 31.433 0.55191 31.433 31.186 31.738 -1.9073E-06 167 28 10 0 0 0 0.00013999 2 12744 93.448 93.448 1 1.2701 1.044 0 9804500 4136200 5668300 9800 1092 3708 3808 15399;15400 15399 ETAHSVLGSDANDVVITVPFDFGEK 25 1 0 Unmodified _ETAHSVLGSDANDVVITVPFDFGEK_ 0 0 0 Q0VDF9;B4DYI5 Q0VDF9 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.1059 3 883.101052 2646.28133 65577.88 0.80347 0.00070954 -0.52383 -0.00046259 0.27964 0.00024695 883.434419396016 886.106311815393 119.27 0.41875 119.27 119.11 119.52 0 109 29 6 0 0 0 4.2208E-07 1 78650 48.771 48.771 1 1.7108 1.7234 0 16156000 4790900 11365000 9801 1697 3709 3809 15401 15401 ETANAIVSQQTPQR 14 0 1 Unmodified _ETANAIVSQQTPQR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;A0A087X270 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.8964 2 771.897168 1541.77978 71719.6 1.0444 0.00080615 -0.23081 -0.00017816 0.81356 0.00062799 771.89662571491 776.901251017084 35.939 0.43797 35.939 35.711 36.149 0 143 42 4 0 0 0 3.798E-21 3 18100 143.97 143.97 1 1.0048 1.0401 0 13797000 7000800 6796600 9802 391 3710 3810 15402;15403;15404 15404 ETANAIVSQQTPQR 14 0 1 Unmodified _ETANAIVSQQTPQR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;A0A087X270 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.8977 2 771.897168 1541.77978 71113.27 0.93998 0.00072557 0.13325 0.00010285 1.0732 0.00082842 771.897361335223 776.901475550611 35.091 0.36205 35.091 34.952 35.314 0 145 32 6 0 0 0 3.7193E-14 2 17866 125.97 114.1 1 1.0547 1.1185 0 23884000 11564000 12321000 9803 391 3710 3810 15405;15406 15406 ETANAIVSQQTPQR 14 0 1 Unmodified _ETANAIVSQQTPQR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;A0A087X270 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.8976 2 771.897168 1541.77978 69985.03 0.58162 0.00044895 0.19189 0.00014812 0.77351 0.00059707 771.897447118732 776.901435013571 41.391 0.49686 41.391 41.151 41.647 0 181 38 6 0 0 0 4.0475E-05 2 19172 94.538 80.38 1 0.88868 0.7613 0 6078500 3327500 2751000 9804 391 3710 3810 15407;15408 15408 ETANAIVSQQTPQR 14 0 1 Unmodified _ETANAIVSQQTPQR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;A0A087X270 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.9011 2 771.897168 1541.77978 69758.52 0.42491 0.00032799 0.095251 7.3524E-05 0.52016 0.00040151 771.897140005421 776.901359852557 41.679 0.46878 41.679 41.477 41.945 0 173 34 6 0 0 0 0.00086228 2 18783 57.802 57.802 1 0.82188 0.69407 0 4733700 2552600 2181100 9805 391 3710 3810 15409;15410 15409 ETASELLMR 9 0 1 Oxidation (M) _ETASELLM(ox)R_ ETASELLM(1)R ETASELLM(70.52)R 0 1 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.2702 2 533.265881 1064.51721 83403.2 0.20438 0.00010899 -0.015008 -8.0032E-06 0.18937 0.00010099 533.265775613403 538.270137359694 50.177 0.40199 50.177 49.992 50.394 3.8147E-06 122 38 4 0 0 0 0.0019086 2 27742 70.525 60.614 1 1.4103 1.4806 0 11870000 4918100 6951800 9806 415 3711 3811 15411;15412 15412 301 ETASELLMR 9 0 1 Oxidation (M) _ETASELLM(ox)R_ ETASELLM(1)R ETASELLM(60.59)R 0 1 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.2661 2 533.265881 1064.51721 83379.73 0.44117 0.00023526 -0.18137 -9.6717E-05 0.25981 0.00013855 533.265788856804 538.270197613745 48.997 0.39202 48.997 48.763 49.155 0 115 32 5 0 0 0 0.0043546 1 27527 60.59 51.196 1 1.2872 1.3595 0 23483000 9439500 14043000 9807 415 3711 3811 15413 15413 301 ETDAFVCRPNAALCR 15 0 2 Unmodified _ETDAFVCRPNAALCR_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.2952 3 593.947017 1778.81922 80253.35 0.78408 0.0004657 0.19575 0.00011626 0.97983 0.00058197 594.281203976474 600.953649089394 55.392 0.33831 55.392 55.259 55.597 -3.8147E-06 55 29 4 0 0 0 0.044851 1 31113 30.483 27.062 1 0.8046 0.86929 0 19629000 8100800 11529000 9808 895 3712 3812 15414 15414 ETDAFVCRPNAALCR 15 0 2 Unmodified _ETDAFVCRPNAALCR_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.9528 3 593.947017 1778.81922 78636.29 0.53779 0.00031942 -0.82103 -0.00048765 -0.28324 -0.00016823 594.280689230246 600.6189155358 54.251 0.40226 54.251 54.075 54.477 0 117 33 6 0 0 0 0.00060655 1 30981 48.112 48.112 1 0.70017 0.76929 0 20698000 13676000 7022000 9809 895 3712 3812 15415 15415 ETDAFVCRPNAALCR 15 0 2 Unmodified _ETDAFVCRPNAALCR_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 600.9537 3 593.947017 1778.81922 77573.27 0.44886 0.0002666 -0.26197 -0.00015559 0.18689 0.000111 594.281153483046 600.619216213339 64.519 0.55777 64.519 64.241 64.798 0 198 37 7 0 0 0 0.03041 1 33128 22.538 22.538 1 1.2259 1.0367 0 9518200 4699400 4818900 9810 895 3712 3812 15416 15416 ETDAFVCRPNAALCR 15 0 2 Unmodified _ETDAFVCRPNAALCR_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.9535 3 593.947017 1778.81922 76562.2 0.37613 0.0002234 0.59158 0.00035137 0.96772 0.00057477 594.280714165416 600.619154600335 65.026 0.86198 65.026 64.492 65.354 0 339 67 9 0 0 0 0.0095644 1 32718 30.961 30.961 1 1.0975 1 0 7503600 3480100 4023500 9811 895 3712 3812 15417 15417 ETDAHLANPVLPDEVLQEAVPGSIR 25 0 1 Unmodified _ETDAHLANPVLPDEVLQEAVPGSIR_ 0 0 0 A8MX75;P18074;E7EVE9;K7EKF3 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 891.1304 3 890.795963 2669.36606 65756.63 0.73281 0.00065278 -0.09188 -8.1846E-05 0.64093 0.00057094 891.130420590461 894.466477243008 116.61 0.41858 116.61 116.4 116.82 0 152 28 9 0 0 0 5.0819E-06 2 74424 40.177 40.177 1 0.72131 0.73019 0 17967000 10965000 7001800 9812 799 3713 3813 15418;15419 15418 ETDAHLANPVLPDEVLQEAVPGSIR 25 0 1 Unmodified _ETDAHLANPVLPDEVLQEAVPGSIR_ 0 0 0 A8MX75;P18074;E7EVE9;K7EKF3 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 891.131 3 890.795963 2669.36606 65870.69 0.45223 0.00040285 0.40961 0.00036488 0.86185 0.00076773 891.130326235321 894.466499988061 116.03 0.39735 116.03 115.84 116.24 7.6294E-06 145 25 8 0 0 0 1.9626E-10 1 75843 61.37 61.37 1 0.63011 0.62708 0 16378000 10319000 6058800 9813 799 3713 3813 15420 15420 ETDAHLANPVLPDEVLQEAVPGSIR 25 0 1 Unmodified _ETDAHLANPVLPDEVLQEAVPGSIR_ 0 0 0 A8MX75;P18074;E7EVE9;K7EKF3 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 891.1308 3 890.795963 2669.36606 64528.95 0.87197 0.00077674 -0.3093 -0.00027552 0.56267 0.00050122 891.130026924337 894.465503495973 128.06 0.85482 128.06 127.51 128.37 0 118 33 9 0 0 0 1.4486E-06 2 77235 46.878 46.878 1 0.80519 0.68387 0 9182900 4788200 4394600 9814 799 3713 3813 15421;15422 15422 ETDAHLANPVLPDEVLQEAVPGSIR 25 0 1 Unmodified _ETDAHLANPVLPDEVLQEAVPGSIR_ 0 0 0 A8MX75;P18074;E7EVE9;K7EKF3 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 891.1307 3 890.795963 2669.36606 63860.1 0.42172 0.00037567 0.74933 0.0006675 1.171 0.0010432 891.130868733982 894.466304887238 127.91 0.46251 127.91 127.63 128.09 0 85 18 8 0 0 0 0.00024729 1 76204 34.125 34.125 1 1.0159 0.84305 0 15225000 4975600 10249000 9815 799 3713 3813 15423 15423 ETDCGVHINAGPEIGVASTK 20 1 0 Unmodified _ETDCGVHINAGPEIGVASTK_ 0 0 0 Q06210;B3KM63;A0A0S2Z4W6;B3KMR8;B2RB90;A0A0S2Z4X9;O94808 Q06210 Q06210 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.0004 3 685.665233 2053.97387 72516.05 0.51166 0.00035083 -0.25149 -0.00017244 0.26018 0.00017839 686.000154333957 688.336660601137 78.333 0.44133 78.333 78.111 78.553 0 125 29 7 0 0 0 0.027581 1 42048 17.148 13.544 1 1.4312 1.1727 0 2446400 1160400 1286000 9816 1688 3714 3814 15424 15424 ETDDTLVLSFVGQTR 15 0 1 Unmodified _ETDDTLVLSFVGQTR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.9305 2 840.925591 1679.83663 67292.97 0.58255 0.00048988 -0.52166 -0.00043867 0.06089 5.1204E-05 840.925174393373 845.928651291152 114.27 0.67403 114.27 113.89 114.56 0 266 49 9 0 0 0 6.7285E-16 3 72562 136.38 136.38 1 0.61456 0.65546 0 44044000 26587000 17457000 9817 1770 3715 3815 15425;15426;15427 15427 ETDDTLVLSFVGQTR 15 0 1 Unmodified _ETDDTLVLSFVGQTR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.9291 2 840.925591 1679.83663 67369.4 0.52281 0.00043964 -0.15226 -0.00012804 0.37055 0.00031161 840.925301544061 845.928894714683 113.72 0.64524 113.72 113.41 114.06 7.6294E-06 267 46 9 0 0 0 6.074E-22 2 73794 142.91 142.91 1 0.68049 0.7433 0 37894000 21299000 16595000 9818 1770 3715 3815 15428;15429 15428 ETDDTLVLSFVGQTR 15 0 1 Unmodified _ETDDTLVLSFVGQTR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 845.9294 2 840.925591 1679.83663 66681.27 0.77394 0.00065082 -0.65329 -0.00054937 0.12064 0.00010145 840.925061765014 845.928255350835 125.45 0.679 125.45 125.17 125.84 -7.6294E-06 133 25 9 0 0 0 0.00054215 2 75333 71.085 71.085 1 1.0911 0.90552 0 11001000 5086600 5914000 9819 1770 3715 3815 15430;15431 15431 ETDDTLVLSFVGQTR 15 0 1 Unmodified _ETDDTLVLSFVGQTR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 840.926 2 840.925591 1679.83663 66759.63 0.7686 0.00064633 -0.85167 -0.00071619 -0.083073 -6.9858E-05 841.426614753713 846.42993857048 125.34 0.61717 125.34 125.08 125.7 0 148 26 7 0 0 0 0.0012103 3 74267 69.578 69.578 1 1.0349 0.84324 0 9596600 4651700 4944900 9820 1770 3715 3815 15432;15433;15434 15432 ETDLLILFK 9 1 0 Unmodified _ETDLLILFK_ 0 0 0 B5BUB5;P05455;Q14730;Q9UMH6 B5BUB5 B5BUB5 SSB Lupus La protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.3291 2 546.320983 1090.62741 84815.37 0.743 0.00040592 -0.27987 -0.0001529 0.46313 0.00025302 546.320621504618 550.327905067721 121.09 0.48715 121.09 120.88 121.37 7.6294E-06 124 32 6 0 0 0 0.0021808 1 78067 75.738 60.299 1 1.2561 1.2494 0 8032800 3869500 4163300 9821 1077 3716 3816 15435 15435 ETDLLILFK 9 1 0 Unmodified _ETDLLILFK_ 0 0 0 B5BUB5;P05455;Q14730;Q9UMH6 B5BUB5 B5BUB5 SSB Lupus La protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.3215 2 546.320983 1090.62741 83494.41 0.84056 0.00045921 -0.033697 -1.8409E-05 0.80686 0.00044081 546.32071681272 550.328097268767 120.54 0.54098 120.54 120.28 120.82 0 144 38 5 0 0 0 0.0074668 2 79677 61.962 47.601 1 1.3163 1.3654 0 11249000 4668300 6580700 9822 1077 3716 3816 15436;15437 15437 ETDLLILFK 9 1 0 Unmodified _ETDLLILFK_ 0 0 0 B5BUB5;P05455;Q14730;Q9UMH6 B5BUB5 B5BUB5 SSB Lupus La protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.3204 2 546.320983 1090.62741 84274.2 0.85204 0.00046549 -0.35508 -0.00019399 0.49696 0.0002715 546.320618901845 550.327877103879 133.37 0.50134 133.37 133.14 133.64 0 79 21 6 0 0 0 0.039815 1 81186 42.109 35.659 1 0.52315 0.43847 0 1356900 825190 531730 9823 1077 3716 3816 15438 15438 ETDLLILFK 9 1 0 Unmodified _ETDLLILFK_ 0 0 0 B5BUB5;P05455;Q14730;Q9UMH6 B5BUB5 B5BUB5 SSB Lupus La protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.3209 2 546.320983 1090.62741 84502.65 1.0571 0.00057751 -0.20271 -0.00011074 0.85437 0.00046676 546.320759864158 550.327907048565 133.07 0.39062 133.07 132.89 133.28 0 57 17 6 0 0 0 0.032386 2 80060 45.081 37.141 1 0.58077 0.512 0 1216700 717150 499590 9824 1077 3716 3816 15439;15440 15439 ETDLQELFRPFGSISR 16 0 2 Unmodified _ETDLQELFRPFGSISR_ 0 0 1 Q6IAM0;O75821;A8K5K5;K7EP16;K7ENA8 Q6IAM0 Q6IAM0 EIF3G Eukaryotic translation initiation factor 3 subunit G MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.6614 3 632.326769 1893.95848 76420.14 1.1224 0.00070974 -0.026153 -1.6537E-05 1.0963 0.0006932 632.661013019504 638.998926150536 128.32 0.34401 128.32 128.16 128.5 0 73 14 7 0 0 0 0.0097107 1 77476 25.957 25.957 1 1.1756 1.0742 0 2023500 937850 1085700 9825 1414 3717 3817 15441 15441 ETDPDYEDVSVALPNK 16 1 0 Unmodified _ETDPDYEDVSVALPNK_ 0 0 0 Q9ULM3 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.4193 2 896.417796 1790.82104 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.408 1 83.408 82.908 83.908 7.6294E-06 0 0 0 0.0074301 1 51116 48.948 34.072 1 9826 2110 3718 3818 15442 15442 ETEEILADVLK 11 1 0 Unmodified _ETEEILADVLK_ 0 0 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.3479 2 630.340101 1258.66565 76935.77 0.70713 0.00044573 0.15032 9.4754E-05 0.85745 0.00054048 630.33997368689 634.347262395714 106.58 0.88158 106.58 106.14 107.02 0 220 65 5 0 0 0 2.9891E-17 2 66182 160.59 137.52 1 0.80132 0.86346 0 37858000 21327000 16531000 9827 1619 3719 3819 15443;15444 15443 ETEEILADVLK 11 1 0 Unmodified _ETEEILADVLK_ 0 0 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.3413 2 630.340101 1258.66565 76916.82 0.82833 0.00052213 0.34907 0.00022003 1.1774 0.00074217 630.340069825609 634.347458636607 105.95 0.69785 105.95 105.53 106.22 0 261 53 6 0 0 0 3.5611E-08 3 67320 119.75 101.21 1 0.90981 1.0249 0 59044000 31319000 27724000 9828 1619 3719 3819 15445;15446;15447 15446 ETEEILADVLK 11 1 0 Unmodified _ETEEILADVLK_ 0 0 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.3478 2 630.340101 1258.66565 78437.72 0.79839 0.00050326 0.56335 0.0003551 1.3617 0.00085836 630.340146407808 634.348218104908 118.11 0.52818 118.11 117.9 118.42 -7.6294E-06 86 21 6 0 0 0 0.0012626 1 69661 68.847 56.892 1 0.78625 0.6116 0 3677600 2147300 1530300 9829 1619 3719 3819 15448 15448 ETEEILADVLK 11 1 0 Unmodified _ETEEILADVLK_ 0 0 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.3475 2 630.340101 1258.66565 78045.66 0.56957 0.00035902 0.35643 0.00022467 0.926 0.0005837 630.340034025846 634.347765530747 117.97 0.48529 117.97 117.75 118.23 -7.6294E-06 83 21 5 0 0 0 0.009276 1 68729 49.472 42.881 1 1.0632 0.83475 0 3822400 1619900 2202400 9830 1619 3719 3819 15449 15449 ETEENAVWIR 10 0 1 Unmodified _ETEENAVWIR_ 0 0 0 Q96H22;H3BRU7;H3BMC7;D3DUK9 Q96H22 Q96H22 CENPN;C16orf60 Centromere protein N ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.8087 2 623.806759 1245.59897 NaN NaN NaN 0.044988 2.8064E-05 NaN NaN NaN NaN 62.298 0.33059 62.298 62.093 62.424 -3.8147E-06 0 0 0 0.042278 1 35693 48.794 39.013 1 NaN NaN 0 3303800 3303800 0 9831 1970 3720 3820 15450 15450 ETEENAVWIR 10 0 1 Unmodified _ETEENAVWIR_ 0 0 0 Q96H22;H3BRU7;H3BMC7;D3DUK9 Q96H22 Q96H22 CENPN;C16orf60 Centromere protein N MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.8116 2 623.806759 1245.59897 77727.95 0.35467 0.00022124 -0.12176 -7.5957E-05 0.2329 0.00014529 623.806834420538 628.811081395692 71.684 0.467 71.684 71.387 71.854 0 107 33 4 0 0 0 0.017517 2 37755 47.823 47.823 1 1.0218 0.88648 0 2439400 1111100 1328300 9832 1970 3720 3820 15451;15452 15452 ETEGGTVLTATTSELEAINK 20 1 0 Unmodified _ETEGGTVLTATTSELEAINK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1037.03 2 1032.52078 2063.02701 60818.64 0.44335 0.00045776 0.33389 0.00034475 0.77723 0.00080251 1032.52094221029 1036.52828132544 108.09 0.4106 108.09 107.85 108.27 0 156 31 7 0 0 0 5.5704E-06 2 67362 55.841 55.841 1 0.79062 0.77626 0 23071000 11283000 11788000 9833 803 3721 3821 15453;15454 15454 ETEGGTVLTATTSELEAINK 20 1 0 Unmodified _ETEGGTVLTATTSELEAINK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1033.0254 2 1032.52078 2063.02701 60425.27 0.45743 0.00047231 -0.031598 -3.2626E-05 0.42584 0.00043968 1033.0228729898 1036.52745566923 107.53 0.43213 107.53 107.3 107.74 7.6294E-06 137 29 6 0 0 0 0.0011166 1 68583 49.298 34.737 1 0.89629 0.93248 0 18996000 8557100 10439000 9834 803 3721 3821 15455 15455 ETEGGTVLTATTSELEAINK 20 1 0 Unmodified _ETEGGTVLTATTSELEAINK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1036.5275 2 1032.52078 2063.02701 61838.31 0.62512 0.00064545 -0.62571 -0.00064605 -0.00058856 -6.077E-07 1033.021935904 1036.52756886746 119.67 0.30512 119.67 119.53 119.84 0 62 15 6 0 0 0 6.5609E-06 2 70897 61.409 38.689 1 1.1853 0.93603 0 5280900 2492600 2788200 9835 803 3721 3821 15456;15457 15456 ETEGGTVLTATTSELEAINK 20 1 0 Unmodified _ETEGGTVLTATTSELEAINK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1037.0305 2 1032.52078 2063.02701 62013.8 0.43991 0.00045422 -0.38017 -0.00039253 0.059743 6.1686E-05 1032.52079383518 1036.5268003297 119.53 0.29986 119.53 119.34 119.64 0 59 14 6 0 0 0 0.00017996 1 69842 38.995 31.084 1 0.97881 0.79765 0 6647400 3102200 3545200 9836 803 3721 3821 15458 15458 ETEILFHSSLLR 12 0 1 Unmodified _ETEILFHSSLLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.6023 3 482.264669 1443.77218 88796.27 0.66565 0.00032102 0.84288 0.00040649 1.5085 0.00072751 482.265051833097 485.601162087992 91.03 0.96376 91.03 90.603 91.567 0 204 78 4 0 0 0 0.036754 1 54898 23.092 23.092 1 1.0127 1.0415 0 25139000 13437000 11702000 9837 2038 3722 3822 15459 15459 ETEILFHSSLLR 12 0 1 Unmodified _ETEILFHSSLLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.897 2 722.893366 1443.77218 70300.87 1.2535 0.00090618 -0.59049 -0.00042686 0.66306 0.00047932 722.892704843967 727.897227722267 90.882 0.5826 90.882 90.625 91.208 0 104 48 4 0 0 0 9.3496E-18 1 54963 126.39 126.39 1 1.1409 1.1881 0 38286000 17900000 20386000 9838 2038 3722 3822 15460 15460 ETEILFHSSLLR 12 0 1 Unmodified _ETEILFHSSLLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.8936 2 722.893366 1443.77218 70785.8 0.68922 0.00049824 0.16792 0.00012139 0.85714 0.00061962 722.892716546534 727.89759265023 103.19 0.8141 103.19 102.83 103.65 -7.6294E-06 159 49 6 0 0 0 0.053847 1 58475 32.008 27.96 1 1.3174 1.1031 0 24874000 11552000 13322000 9839 2038 3722 3822 15461 15461 ETEILFHSSLLR 12 0 1 Unmodified _ETEILFHSSLLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.8977 2 722.893366 1443.77218 71109.59 0.50292 0.00036356 -0.065293 -4.72E-05 0.43763 0.00031636 723.394811374093 727.897530334976 102.7 0.77261 102.7 102.53 103.3 0 161 50 6 0 0 0 0.00016714 2 57426 107.83 107.83 1 1.2316 1.0727 0 24981000 9774100 15207000 9840 2038 3722 3822 15462;15463 15462 ETELELQMK 9 1 0 Oxidation (M) _ETELELQM(ox)K_ ETELELQM(1)K ETELELQM(93.2)K 0 1 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.7861 2 568.778822 1135.54309 80923.09 0.73276 0.00041678 0.04322 2.4583E-05 0.77598 0.00044136 568.779102729145 572.78573460637 39.29 0.46183 39.29 39.056 39.518 0 98 35 4 0 0 0 0.00042189 1 20251 93.195 86.556 1 1.6115 1.6463 0 17799000 7528600 10270000 9841 716 3723 3823 15464 15464 551 ETELELQMK 9 1 0 Oxidation (M) _ETELELQM(ox)K_ ETELELQM(1)K ETELELQM(41.43)K 0 1 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.7787 2 568.778822 1135.54309 80104.46 0.54348 0.00030912 -0.7405 -0.00042118 -0.19703 -0.00011206 568.778492238599 572.785720444152 44.544 0.51134 44.544 44.287 44.799 0 119 36 4 0 0 0 0.020112 1 21170 41.429 25.548 1 0.70174 0.59295 0 2085400 1258300 827100 9842 716 3723 3823 15465 15465 551 ETELELQMK 9 1 0 Unmodified _ETELELQMK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.789 2 560.781364 1119.54818 80186.24 0.49219 0.00027601 0.18207 0.0001021 0.67426 0.00037811 560.781451408018 564.788441337402 74.552 0.56451 74.552 74.354 74.918 0 128 31 6 0 0 0 0.001023 2 38776 91.064 58.172 1 1.4451 1.1711 0 2631800 1054700 1577100 9843 716 3723 3824 15466;15467 15467 ETENDDLTNVIQK 13 1 0 Unmodified _ETENDDLTNVIQK_ 0 0 0 O95373;B3KQG6 O95373 O95373 IPO7 Importin-7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.8687 2 759.867742 1517.72093 NaN NaN NaN 0.56062 0.000426 NaN NaN NaN NaN 64.361 0.36426 64.361 64.209 64.574 0 0 0 0 0.0034685 1 36953 65.056 54.298 1 NaN NaN 0 6406600 6406600 0 9844 1424 3724 3825 15468 15468 ETENDDLTNVIQK 13 1 0 Unmodified _ETENDDLTNVIQK_ 0 0 0 O95373;B3KQG6 O95373 O95373 IPO7 Importin-7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.8752 2 759.867742 1517.72093 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.222 1 64.222 63.722 64.722 0 0 0 0 0.00010389 1 36888 93.096 76.871 1 9845 1424 3724 3825 15469 15469 ETENDDLTNVIQK 13 1 0 Unmodified _ETENDDLTNVIQK_ 0 0 0 O95373;B3KQG6 O95373 O95373 IPO7 Importin-7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.875 2 759.867742 1517.72093 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.184 1 63.184 62.684 63.684 0 0 0 0 0.00010565 1 37104 93.058 82.228 1 9846 1424 3724 3825 15470 15470 ETENDDLTNVIQK 13 1 0 Unmodified _ETENDDLTNVIQK_ 0 0 0 O95373;B3KQG6 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.8672 2 759.867742 1517.72093 68351.32 0.58125 0.00044167 0.38246 0.00029062 0.96371 0.00073229 759.867957227143 763.874651519871 74.536 0.61674 74.536 74.268 74.884 7.6294E-06 100 35 5 0 0 0 0.0044503 1 38756 48.44 40.515 1 1.1268 0.91473 0 2856200 1160100 1696200 9847 1424 3724 3825 15471 15471 ETEQLEIK 8 1 0 Unmodified _ETEQLEIK_ 0 0 0 H0Y9Z8;Q9BPX3 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.2694 2 495.261122 988.507691 85789.96 0.54193 0.0002684 0.28172 0.00013952 0.82365 0.00040792 495.261202917099 499.268126570946 38.31 1.0309 38.31 37.786 38.817 -3.8147E-06 436 86 8 0 0 0 0.0078439 2 19514 81.191 30.584 1 0.80483 0.91118 0 152990000 85372000 67614000 9848 1995;1289 3725 3826 15472;15473 15473 ETEQLEIK 8 1 0 Unmodified _ETEQLEIK_ 0 0 0 H0Y9Z8;Q9BPX3 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2613 2 495.261122 988.507691 84815.17 0.060284 2.9857E-05 0.58567 0.00029006 0.64595 0.00031991 495.261318169325 499.268309911855 37.447 1.0743 37.447 36.884 37.958 0 362 87 8 0 0 0 0.0074903 2 19312 82.716 23.511 1 0.79188 0.91765 0 213540000 118200000 95338000 9849 1995;1289 3725 3826 15474;15475 15475 ETEQLEIK 8 1 0 Unmodified _ETEQLEIK_ 0 0 0 H0Y9Z8;Q9BPX3 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.269 2 495.261122 988.507691 85010.42 0.23959 0.00011866 0.42155 0.00020878 0.66115 0.00032744 495.261224589074 499.268387576047 43.443 0.94114 43.443 43.017 43.958 0 356 62 8 0 0 0 0.0078439 2 20380 81.191 36.955 1 1.543 1.2626 0 34962000 13896000 21066000 9850 1995;1289 3725 3826 15476;15477 15477 ETEQLEIK 8 1 0 Unmodified _ETEQLEIK_ 0 0 0 H0Y9Z8;Q9BPX3 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2614 2 495.261122 988.507691 84673.63 -0.022829 -1.1306E-05 0.72229 0.00035772 0.69946 0.00034641 495.261317547504 499.268543786577 43.489 1.0092 43.489 43.007 44.016 0 355 63 8 0 0 0 0.0048039 2 19918 92.47 42.88 1 1.6078 1.3233 0 28396000 11552000 16844000 9851 1995;1289 3725 3826 15478;15479 15479 ETESEAEDNLDDLEK 15 1 0 Unmodified _ETESEAEDNLDDLEK_ 0 0 0 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.8717 2 868.870876 1735.7272 66292.78 0.54101 0.00047007 0.3218 0.0002796 0.86281 0.00074967 868.870905230205 873.380205007453 59.978 0.40822 59.978 59.804 60.212 0 84 29 4 0 0 0 8.503E-06 3 34934 94.122 92.181 1 1.3236 1.3668 0 11459000 5018600 6440200 9852 570 3726 3827 15480;15481;15482 15482 ETESQLLPDVGAIVTCK 17 1 0 Unmodified _ETESQLLPDVGAIVTCK_ 0 0 0 R4GNH9;R4GMQ7;B1AMU7;B1AMU4;Q9Y3B2 R4GNH9 R4GNH9 EXOSC1 Exosome complex component CSL4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 930.9775 2 930.474591 1858.93463 64004.8 0.78999 0.00073507 -0.74777 -0.00069578 0.042223 3.9287E-05 930.975375617086 934.481231187663 124.29 0.62139 124.29 124.12 124.75 0 133 26 8 0 0 0 0.00023137 1 74429 49.333 49.333 1 0.85735 0.68576 0 8809800 4489200 4320600 9853 817 3727 3828 15483 15483 ETFEDSNLIPK 11 1 0 Unmodified _ETFEDSNLIPK_ 0 0 0 B4DY32;P08243 B4DY32 B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.8297 2 646.822075 1291.6296 NaN NaN NaN 0.33457 0.0002164 NaN NaN NaN NaN 81.145 0.51904 81.145 80.872 81.391 0 0 0 0 0.0099794 1 48382 59.153 47.198 1 NaN NaN 0 8896400 0 8896400 9854 1051 3728 3829 15484 15484 ETFEDSNLIPK 11 1 0 Unmodified _ETFEDSNLIPK_ 0 0 0 B4DY32;P08243 B4DY32 B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.8287 2 646.822075 1291.6296 NaN NaN NaN -0.75233 -0.00048662 NaN NaN NaN NaN 80.189 0.56319 80.189 79.906 80.469 0 0 0 0 0.0043515 1 48885 66.27 43.199 1 NaN NaN 0 8520100 0 8520100 9855 1051 3728 3829 15485 15485 ETFLTSPEELYR 12 0 1 Unmodified _ETFLTSPEELYR_ 0 0 0 H0YJ63;G3V438;H0YJG7;O95433 H0YJ63 H0YJ63 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.8705 2 742.867014 1483.71947 NaN NaN NaN 0.52842 0.00039254 NaN NaN NaN NaN 97.226 0.42076 97.226 96.97 97.391 0 0 0 0 0.0053565 1 59234 62.303 43.991 1 NaN NaN 0 4636600 0 4636600 9856 1273 3729 3830 15486 15486 ETFLTSPEELYR 12 0 1 Unmodified _ETFLTSPEELYR_ 0 0 0 H0YJ63;G3V438;H0YJG7;O95433 H0YJ63 H0YJ63 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.8732 2 742.867014 1483.71947 NaN NaN NaN 1.1287 0.00083845 NaN NaN NaN NaN 96.413 0.3832 96.413 96.267 96.651 0 0 0 0 0.0075173 1 60122 58.37 26.436 1 NaN NaN 0 4643000 0 4643000 9857 1273 3729 3830 15487 15487 ETFSSAEGTVDK 12 1 0 Unmodified _ETFSSAEGTVDK_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.8005 2 635.793514 1269.57248 76258.72 0.62699 0.00039864 -0.60967 -0.00038762 0.017323 1.1014E-05 635.793545611672 639.799999355193 33.709 0.62613 33.709 33.382 34.009 0 221 61 5 0 0 0 0.00036313 2 16668 72.096 72.096 1 0.84691 0.83396 0 24192000 12697000 11495000 9858 672 3730 3831 15488;15489 15488 ETFSSAEGTVDK 12 1 0 Unmodified _ETFSSAEGTVDK_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.7933 2 635.793514 1269.57248 74388.4 0.48171 0.00030627 -0.6144 -0.00039063 -0.13269 -8.4363E-05 635.793797954735 639.799742573667 33.173 0.52753 33.173 32.902 33.43 0 212 48 6 0 0 0 9.3504E-05 2 16457 96.171 90.83 1 0.86465 0.95998 0 49220000 30070000 19151000 9859 672 3730 3831 15490;15491 15491 ETFSSAEGTVDK 12 1 0 Unmodified _ETFSSAEGTVDK_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.7943 2 635.793514 1269.57248 76787.24 0.35777 0.00022747 -0.46912 -0.00029827 -0.11135 -7.0797E-05 635.793860054651 639.799629123722 39.029 0.70029 39.029 38.795 39.495 0 254 60 8 0 0 0 0.00013806 2 17737 93.561 85.914 1 1.4298 1.1453 0 8487400 4085300 4402100 9860 672 3730 3831 15492;15493 15493 ETFSSAEGTVDK 12 1 0 Unmodified _ETFSSAEGTVDK_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.8002 2 635.793514 1269.57248 76456.42 0.35391 0.00022501 -0.78392 -0.00049841 -0.43001 -0.0002734 635.793744372448 639.799649076594 39.325 0.67337 39.325 39.063 39.737 0 216 51 8 0 0 0 0.004055 1 17374 54.471 52.317 1 1.3868 1.133 0 8141700 3242500 4899200 9861 672 3730 3831 15494 15494 ETGDPGGQLVLAGDPR 16 0 1 Unmodified _ETGDPGGQLVLAGDPR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.4029 2 791.397001 1580.77945 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.102 1 70.102 69.602 70.602 0 0 0 0 0.00074531 1 41823 57.802 39.13 1 9862 1102 3731 3832 15495 15495 ETGEHLVHVK 10 1 0 Unmodified _ETGEHLVHVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.8061 2 574.806562 1147.59857 80818.34 0.26705 0.0001535 -0.30517 -0.00017541 -0.038117 -2.191E-05 574.806213167093 578.813423879033 20.872 0.30632 20.872 20.708 21.014 0 36 10 5 0 0 0 0.00022829 2 7264 93.143 65.514 1 1.6577 1.6336 0 9178900 3492800 5686100 9863 1504 3732 3833 15496;15497 15496 ETGEHLVHVK 10 1 0 Unmodified _ETGEHLVHVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.2723 2 574.806562 1147.59857 82754.91 0.019056 1.0953E-05 -0.10213 -5.8703E-05 -0.08307 -4.7749E-05 574.806501931382 578.813630775202 19.739 0.24555 19.739 19.619 19.865 0 31 10 5 0 0 0 0.00095738 1 6076 103.87 89.735 1 1.7622 1.8085 0 11755000 4775900 6978700 9864 1504 3732 3833 15498 15498 ETGEHLVHVK 10 1 0 Unmodified _ETGEHLVHVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.8135 2 574.806562 1147.59857 NaN NaN NaN -0.17748 -0.00010202 NaN NaN NaN NaN 20.83 0.4974 20.83 20.507 21.004 0 0 0 0 0.0029395 1 5635 78.516 63.256 1 NaN NaN 0 786370 0 786370 9865 1504 3732 3833 15499 15499 ETGFHLTTTNQGASAAGPGFSLK 23 1 0 Unmodified _ETGFHLTTTNQGASAAGPGFSLK_ 0 0 0 Q96CA8;Q6P5Y5;Q4VBY6;A4VCI5;Q5QPR4;J3QR29;B4E3D9;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127 Q96CA8 Q96CA8 CDC2L2;CDC2L1;CDK11A;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.7198 3 764.713351 2291.11822 74287.38 0.83338 0.0006373 0.94154 0.00072001 1.7749 0.0013573 764.713741180103 767.719675747401 86.893 0.25737 86.893 86.763 87.021 0 45 17 4 0 0 0 0.018216 1 52442 18.904 18.904 1 1.7318 1.7075 0 9213300 2215400 6997900 9866 520 3733 3834 15500 15500 ETGFHLTTTNQGASAAGPGFSLK 23 1 0 Unmodified _ETGFHLTTTNQGASAAGPGFSLK_ 0 0 0 Q96CA8;Q6P5Y5;Q4VBY6;A4VCI5;Q5QPR4;J3QR29;B4E3D9;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127 Q96CA8 Q96CA8 CDC2L2;CDC2L1;CDK11A;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.7202 3 764.713351 2291.11822 71570.63 0.89189 0.00068204 0.51345 0.00039265 1.4053 0.0010747 765.047525256549 767.71924032694 85.841 0.31525 85.841 85.633 85.948 7.6294E-06 71 21 5 0 0 0 0.010785 1 52915 21.291 13.593 1 1.2998 1.3987 0 21599000 10528000 11070000 9867 520 3733 3834 15501 15501 ETGGAEGTGDAVLGEK 16 1 0 Unmodified _ETGGAEGTGDAVLGEK_ 0 0 0 I3L0W0;A0A140VK05;B4DN86;Q92667 I3L0W0 I3L0W0 AKAP1 A-kinase anchor protein 1, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.8588 2 745.852092 1489.68963 NaN NaN NaN -0.41919 -0.00031265 NaN NaN NaN NaN 38.122 0.13411 38.122 38.057 38.191 0 0 0 0 9.6315E-05 1 19956 76.357 60.728 1 NaN NaN 0 6607800 0 6607800 9868 614 3734 3835 15502 15502 ETGGAEGTGDAVLGEK 16 1 0 Unmodified _ETGGAEGTGDAVLGEK_ 0 0 0 I3L0W0;A0A140VK05;B4DN86;Q92667 I3L0W0 I3L0W0 AKAP1 A-kinase anchor protein 1, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.8504 2 745.852092 1489.68963 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.138 1 38.138 37.638 38.638 0 0 0 0 0.0001142 1 19965 85.554 69.416 1 9869 614 3734 3835 15503 15503 ETGGFSQEELLK 12 1 0 Unmodified _ETGGFSQEELLK_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.3407 2 669.332807 1336.65106 73141.68 0.55901 0.00037416 -0.24243 -0.00016227 0.31658 0.00021189 669.332283208926 673.339924998288 81.903 1.2947 81.903 81.226 82.521 0 434 76 10 0 0 0 5.1661E-06 2 44451 121.6 104.37 1 1.9833 1.5642 0 17779000 5567000 12212000 9870 1740 3735 3836 15504;15505 15505 ETGGFSQEELLK 12 1 0 Unmodified _ETGGFSQEELLK_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.3397 2 669.332807 1336.65106 73503.42 0.46527 0.00031142 -0.21823 -0.00014607 0.24703 0.00016535 669.332192943869 673.339967587712 82.108 1.2821 82.108 81.475 82.757 0 388 72 8 0 0 0 0.00022395 3 43705 101.97 88.205 1 1.8543 1.5183 0 12536000 3926500 8609500 9871 1740 3735 3836 15506;15507;15508 15508 ETGGILR 7 0 1 Unmodified _ETGGILR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 373.2137 2 373.213778 744.413003 98467.27 0.22407 8.3627E-05 0.24693 9.2159E-05 0.47101 0.00017579 373.213851796021 378.217866561381 28.968 0.88958 28.968 28.454 29.344 0 188 50 6 0 0 0 0.026734 1 13669 77.496 21.401 1 0.90685 1.0716 0 254040000 144910000 109130000 9872 69 3736 3837 15509 15509 ETGSTSIQAADSTAVNGSITPTDK 24 1 0 Unmodified _ETGSTSIQAADSTAVNGSITPTDK_ 0 0 0 D3DUE6;K7EMM8;K7EQB2 D3DUE6;K7EQB2 D3DUE6 N-PAC;GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1180.0732 2 1176.06407 2350.11359 56967.47 -0.094156 -0.00011073 0.66124 0.00077766 0.56708 0.00066693 1176.5650398159 1180.07181502081 67.241 0.36688 67.241 67.028 67.395 0 84 29 6 0 0 0 2.8573E-05 1 38896 38.093 38.093 1 1.7201 1.7601 0 10534000 3700100 6834100 9873 1193;1346 3737 3838 15510 15510 ETGSTSIQAADSTAVNGSITPTDK 24 1 0 Unmodified _ETGSTSIQAADSTAVNGSITPTDK_ 0 0 0 D3DUE6;K7EMM8;K7EQB2 D3DUE6;K7EQB2 D3DUE6 N-PAC;GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1180.0718 2 1176.06407 2350.11359 58002.48 0.079266 9.3222E-05 -0.11288 -0.00013275 -0.033614 -3.9532E-05 1176.5649285399 1180.57284615372 66.369 0.37534 66.369 66.185 66.56 0 73 29 4 0 0 0 1.357E-08 3 39158 50.653 50.653 1 1.5524 1.5698 0 8834000 3374900 5459100 9874 1193;1346 3737 3838 15511;15512;15513 15511 ETGYPLAVK 9 1 0 Unmodified _ETGYPLAVK_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.2757 2 489.26875 976.522947 89031.62 0.41398 0.00020255 -0.1689 -8.264E-05 0.24508 0.00011991 489.268481736421 493.275632477442 50.712 0.38919 50.712 50.554 50.943 0 91 31 5 0 0 0 0.014597 1 28727 55.531 35.894 1 3.9726 4.2285 0 20722000 2844200 17878000 9875 613 3738 3839 15514 15514 ETGYTYILPK 10 1 0 Unmodified _ETGYTYILPK_ 0 0 0 Q6P2Q9;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8144 2 592.813522 1183.61249 79294.01 0.70999 0.00042089 0.18961 0.0001124 0.8996 0.00053329 592.813485340335 596.820895085554 78.73 0.61996 78.73 78.378 78.998 0 218 51 6 0 0 0 0.0023262 1 46554 69.598 69.598 1 0.97156 1.0452 0 33008000 16828000 16181000 9876 1854 3739 3840 15515 15515 ETGYTYILPK 10 1 0 Unmodified _ETGYTYILPK_ 0 0 0 Q6P2Q9;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.8143 2 592.813522 1183.61249 79015.73 0.84142 0.00049881 0.37359 0.00022147 1.215 0.00072028 592.813466490206 596.820659084552 77.631 0.97672 77.631 77.252 78.228 0 227 53 7 0 0 0 0.00051211 2 46965 85.67 85.67 1 0.99177 1.054 0 36191000 19501000 16690000 9877 1854 3739 3840 15516;15517 15517 ETGYVVERPSTTK 13 1 1 Unmodified _ETGYVVERPSTTK_ 0 0 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.8784 2 733.877913 1465.74127 70150.14 0.78439 0.00057565 0.33398 0.0002451 1.1184 0.00082075 733.878062304218 742.88954530784 26.873 0.39348 26.873 26.672 27.065 0 128 25 8 0 0 0 4.9419E-88 2 12145 227.81 191.9 1 1.0587 1.2738 0 90417000 44155000 46263000 9878 2083 3740 3841 15518;15519 15519 ETGYVVERPSTTK 13 1 1 Unmodified _ETGYVVERPSTTK_ 0 0 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.5878 3 489.587701 1465.74127 84408.15 0.32653 0.00015987 0.39999 0.00019583 0.72652 0.0003557 489.587730753538 495.595497356993 26.859 0.43147 26.859 26.599 27.031 -1.9073E-06 97 27 5 0 0 0 0.027076 1 12181 25.922 17.197 1 1.3069 1.556 0 47665000 23135000 24530000 9879 2083 3740 3841 15520 15520 ETGYVVERPSTTK 13 1 1 Unmodified _ETGYVVERPSTTK_ 0 0 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.8778 2 733.877913 1465.74127 70515.81 0.57885 0.0004248 0.043185 3.1692E-05 0.62203 0.0004565 733.877891981072 742.88920348944 26.409 0.3217 26.409 26.234 26.555 1.9073E-06 113 19 8 0 0 0 1.742E-237 2 11788 315.67 266.25 1 1.0589 1.2493 0 120590000 58648000 61941000 9880 2083 3740 3841 15521;15522 15522 ETGYVVERPSTTK 13 1 1 Unmodified _ETGYVVERPSTTK_ 0 0 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.8895 2 733.877913 1465.74127 71394.98 0.53587 0.00039326 -0.00079515 -5.8354E-07 0.53508 0.00039268 733.87776586849 742.889199566557 30.687 0.43178 30.687 30.49 30.922 -1.9073E-06 164 28 8 0 0 0 0.048144 1 12729 43.382 37.142 1 1.0996 0.94227 0 10666000 4545600 6120000 9881 2083 3740 3841 15523 15523 ETGYVVERPSTTK 13 1 1 Unmodified _ETGYVVERPSTTK_ 0 0 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.8903 2 733.877913 1465.74127 70734.47 0.47918 0.00035166 0.33591 0.00024652 0.81509 0.00059818 733.878074043006 742.88934280995 30.829 0.44663 30.829 30.648 31.095 -1.9073E-06 157 23 8 0 0 0 0.01726 1 12335 50.648 44.407 1 1.2428 1.0472 0 8204700 3832300 4372400 9882 2083 3740 3841 15524 15524 ETHFPFAIR 9 0 1 Unmodified _ETHFPFAIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 376.5336 3 373.197819 1116.57163 98562.97 0.0091417 3.4117E-06 -0.26001 -9.7034E-05 -0.25087 -9.3623E-05 373.197668497578 376.53375093867 78.479 0.76234 78.479 78.121 78.884 0 281 66 6 0 0 0 0.00059135 2 46445 68.224 59.009 1 0.95741 0.97944 0 33309000 18159000 15150000 9883 897 3741 3842 15525;15526 15526 ETHFPFAIR 9 0 1 Unmodified _ETHFPFAIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.2932 2 559.293091 1116.57163 82959.99 0.48833 0.00027312 -0.14214 -7.9496E-05 0.34619 0.00019362 559.293324347699 564.296644138742 78.467 0.7118 78.467 78.121 78.833 0 227 61 6 0 0 0 0.015492 1 46376 66.429 49.044 1 1.1086 1.1262 0 29257000 13654000 15602000 9884 897 3741 3842 15527 15527 ETHFPFAIR 9 0 1 Unmodified _ETHFPFAIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.5324 3 373.197819 1116.57163 98249.34 -0.052494 -1.9591E-05 -0.14305 -5.3386E-05 -0.19554 -7.2977E-05 373.197720283572 376.533777303305 76.737 0.71981 76.737 76.386 77.106 0 248 55 6 0 0 0 0.0060156 1 46186 51.066 33.247 1 0.90949 0.99455 0 35074000 17247000 17827000 9885 897 3741 3842 15528 15528 ETHFPFAIR 9 0 1 Unmodified _ETHFPFAIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.2977 2 559.293091 1116.57163 81481.84 0.40854 0.00022849 -0.24975 -0.00013968 0.15879 8.8809E-05 559.795021093452 564.297045100638 76.75 0.62405 76.75 76.431 77.055 0 171 47 6 0 0 0 0.020055 1 46285 50.607 36.935 1 0.99107 1.0532 0 24139000 7790600 16348000 9886 897 3741 3842 15529 15529 ETHFPFAIR 9 0 1 Unmodified _ETHFPFAIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.2972 2 559.293091 1116.57163 NaN NaN NaN -0.69645 -0.00038952 NaN NaN NaN NaN 88.363 0.80072 88.363 88.094 88.895 0 0 0 0 0.035231 1 48628 51.787 42.924 1 NaN NaN 0 4117800 0 4117800 9887 897 3741 3842 15530 15530 ETHFPFAIR 9 0 1 Unmodified _ETHFPFAIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.2977 2 559.293091 1116.57163 82028.65 0.51254 0.00028666 0.29338 0.00016408 0.80592 0.00045074 559.794907287259 564.297081309074 88.183 0.82225 88.183 87.899 88.722 0 194 46 7 0 0 0 0.012656 1 47735 57.281 52.925 1 1.1473 0.99976 0 4257300 1292000 2965300 9888 897 3741 3842 15531 15531 ETIDNNSVSSPLQSLQQR 18 0 1 Unmodified _ETIDNNSVSSPLQSLQQR_ 0 0 0 E5RGA2;B3KW56;Q6IAX5;B2R806;P60228;E5RHS5;H0YAW4 E5RGA2 E5RGA2 EIF3E Eukaryotic translation initiation factor 3 subunit E ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1009.004 2 1008.50326 2014.99196 NaN NaN NaN 0.39115 0.00039448 NaN NaN NaN NaN 83.83 0.16241 83.83 83.765 83.928 0 0 0 0 0.004841 1 50246 46.481 38.176 1 NaN NaN 0 4815100 4815100 0 9889 857 3742 3843 15532 15532 ETIDNNSVSSPLQSLQQR 18 0 1 Unmodified _ETIDNNSVSSPLQSLQQR_ 0 0 0 E5RGA2;B3KW56;Q6IAX5;B2R806;P60228;E5RHS5;H0YAW4 E5RGA2 E5RGA2 EIF3E Eukaryotic translation initiation factor 3 subunit E MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1008.5059 2 1008.50326 2014.99196 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.044 1 83.044 82.544 83.544 0 0 0 0 4.4791E-05 1 50858 69.602 61.089 1 9890 857 3742 3843 15533 15533 ETIEILFSEGLIK 13 1 0 Unmodified _ETIEILFSEGLIK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.4252 2 746.418882 1490.82321 73733.69 0.50939 0.00038022 0.13726 0.00010246 0.64665 0.00048267 746.418790159564 750.426533327289 125.1 0.16711 125.1 124.99 125.16 0 32 10 5 0 0 0 0.00014719 1 81298 73.067 73.067 1 0.83557 0.91907 0 3028100 1718600 1309500 9891 1563 3743 3844 15534 15534 ETIEILFSEGLIK 13 1 0 Unmodified _ETIEILFSEGLIK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.4203 2 746.418882 1490.82321 72455.13 1.0545 0.0007871 -0.10822 -8.0778E-05 0.94628 0.00070632 746.920194364822 750.426309812971 124.75 0.51312 124.75 124.54 125.05 7.6294E-06 120 36 5 0 0 0 8.9602E-06 2 82976 101.38 101.38 1 1.1395 1.1325 0 6175800 3052200 3123600 9892 1563 3743 3844 15535;15536 15536 ETIELSPTGRPK 12 1 1 Unmodified _ETIELSPTGRPK_ 0 0 1 A0A087WSW7;F6XU50;Q6I7N8;A0A0B4J1V9;Q9NRZ9 A0A087WSW7 A0A087WSW7 HELLS Lymphoid-specific helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3762 2 664.364441 1326.71433 75846.73 0.70009 0.00046511 0.58742 0.00039026 1.2875 0.00085537 664.866682703515 673.375749268639 38.46 0.2549 38.46 38.303 38.558 0 51 20 4 0 0 0 0.0049709 1 20177 63.816 52.326 1 1.1395 1.2891 0 15913000 8099300 7813600 9893 400 3744 3845 15537 15537 ETIIAFAWEPNGSK 14 1 0 Unmodified _ETIIAFAWEPNGSK_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q59FS8 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.9044 2 781.896106 1561.77766 NaN NaN NaN 0.82089 0.00064185 NaN NaN NaN NaN 110.71 0.14877 110.71 110.67 110.82 0 0 0 0 0.0017985 1 69635 68.069 57.837 1 NaN NaN 0 2573500 0 2573500 9894 241 3745 3846 15538 15538 ETILNLLR 8 0 1 Unmodified _ETILNLLR_ 0 0 0 Q6P158;B4DKW2;A0A087WZ11 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.3019 2 486.297842 970.581131 90315.61 0.55953 0.0002721 -0.11683 -5.6813E-05 0.4427 0.00021529 486.297679570316 491.301844391271 108.39 0.63844 108.39 108.14 108.78 0 113 46 4 0 0 0 0.0090389 1 67652 76.035 57.304 1 0.77424 0.78679 0 7442900 3666500 3776300 9895 1850 3746 3847 15539 15539 ETILNLLR 8 0 1 Unmodified _ETILNLLR_ 0 0 0 Q6P158;B4DKW2;A0A087WZ11 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.2981 2 486.297842 970.581131 89978.1 0.44339 0.00021562 -0.24873 -0.00012096 0.19465 9.4658E-05 486.297509345785 491.301949086837 107.7 0.53311 107.7 107.37 107.9 0 105 37 4 0 0 0 0.040892 2 68666 47.067 24.936 1 0.88823 0.90047 0 5435800 3094700 2341100 9896 1850 3746 3847 15540;15541 15540 ETLEAGNYESPMELCK 16 1 0 Oxidation (M) _ETLEAGNYESPM(ox)ELCK_ ETLEAGNYESPM(1)ELCK ETLEAGNYESPM(57.8)ELCK 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.9124 2 943.910966 1885.80738 NaN NaN NaN 0.14081 0.00013291 NaN NaN NaN NaN 65.329 0.34849 65.329 65.138 65.487 0 0 0 0 0.0009494 1 37531 57.802 51.956 1 NaN NaN 0 7374800 7374800 0 9897 1942 3747 3848 15542 15542 1778 ETLEAGNYESPMELCK 16 1 0 Oxidation (M) _ETLEAGNYESPM(ox)ELCK_ ETLEAGNYESPM(1)ELCK ETLEAGNYESPM(81.92)ELCK 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 947.917 2 943.910966 1885.80738 NaN NaN NaN -1.0862 -0.0010253 NaN NaN NaN NaN 65.339 0.40347 65.339 65.149 65.553 0 0 0 0 1.1053E-06 1 37543 81.92 67.501 1 NaN NaN 0 4997600 0 4997600 9898 1942 3747 3848 15543 15543 1778 ETLEAGNYESPMELCK 16 1 0 Oxidation (M) _ETLEAGNYESPM(ox)ELCK_ ETLEAGNYESPM(1)ELCK ETLEAGNYESPM(128.85)ELCK 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.9191 2 943.910966 1885.80738 63655.16 0.49357 0.00046589 -0.41496 -0.00039169 0.078606 7.4197E-05 944.41241582764 947.917512710457 64.267 0.42453 64.267 64.076 64.501 0 169 39 6 0 0 0 9.3583E-18 3 37744 128.85 128.85 1 0.8725 0.87673 0 13638000 6791700 6846600 9899 1942 3747 3848 15544;15545;15546 15545 1778 ETLEAGNYESPMELCK 16 1 0 Oxidation (M) _ETLEAGNYESPM(ox)ELCK_ ETLEAGNYESPM(1)ELCK ETLEAGNYESPM(42.81)ELCK 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.9109 2 943.910966 1885.80738 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.863 1 64.863 64.363 65.363 7.6294E-06 0 0 0 0.010461 1 38220 42.809 36.276 1 9900 1942 3747 3848 15547 15547 1778 ETLEAGNYESPMELCK 16 1 0 Unmodified _ETLEAGNYESPMELCK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 936.4138 2 935.913509 1869.81247 63659.11 0.68836 0.00064425 -0.20827 -0.00019493 0.48009 0.00044932 935.912663706637 939.920441813159 94.529 0.38924 94.529 94.309 94.699 7.6294E-06 90 22 6 0 0 0 0.0089181 2 52889 34.179 34.179 1 1.8797 1.54 0 2586000 1128900 1457200 9901 1942 3747 3849 15548;15549 15549 ETLESALIALDSEK 14 1 0 Unmodified _ETLESALIALDSEK_ 0 0 0 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48;A0A1B0GWF6 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.8989 2 759.898511 1517.78247 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.09 1 113.09 112.59 113.59 7.6294E-06 0 0 0 0.00097599 1 71526 77.593 60.081 1 9902 631 3748 3850 15550 15550 ETLESALIALDSEK 14 1 0 Unmodified _ETLESALIALDSEK_ 0 0 0 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48;A0A1B0GWF6 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.9066 2 759.898511 1517.78247 71452.79 0.77387 0.00058807 0.27372 0.000208 1.0476 0.00079606 759.898106512102 763.905401605726 124.82 0.48859 124.82 124.48 124.97 0 66 19 6 0 0 0 0.023601 2 74827 32.933 26.829 1 1.1464 0.93936 0 2470100 1098700 1371400 9903 631 3748 3850 15551;15552 15552 ETLESALIALDSEK 14 1 0 Unmodified _ETLESALIALDSEK_ 0 0 0 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48;A0A1B0GWF6 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.907 2 759.898511 1517.78247 71236.84 0.82761 0.0006289 0.58776 0.00044664 1.4154 0.0010755 759.898398989842 764.408528426164 124.66 0.52528 124.66 124.33 124.85 0 80 24 6 0 0 0 0.0023711 1 73781 48.948 41.061 1 1.1396 0.90039 0 2020300 948220 1072000 9904 631 3748 3850 15553 15553 ETLIIEPEK 9 1 0 Unmodified _ETLIIEPEK_ 0 0 0 F8VZN8;A0A024RBF1;B2RAH5;O14974;H0YIS4 F8VZN8 F8VZN8 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.3069 2 536.300247 1070.58594 86030.8 0.29614 0.00015882 0.63822 0.00034228 0.93435 0.00050109 536.300615473137 540.306947994818 66.264 0.35571 66.264 66.11 66.465 0 76 30 4 0 0 0 0.0022437 1 38234 74.92 61.341 1 1.6154 1.6352 0 6766400 2542700 4223600 9905 336 3749 3851 15554 15554 ETLIIEPEK 9 1 0 Unmodified _ETLIIEPEK_ 0 0 0 F8VZN8;A0A024RBF1;B2RAH5;O14974;H0YIS4 F8VZN8 F8VZN8 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.8104 2 536.300247 1070.58594 85292.08 0.29847 0.00016007 0.26804 0.00014375 0.56651 0.00030382 536.300180893883 540.307212119072 65.077 0.49634 65.077 64.839 65.336 0 87 39 4 0 0 0 0.0042156 1 38368 69.825 69.825 1 1.4167 1.4416 0 9189300 3529600 5659700 9906 336 3749 3851 15555 15555 ETLLNGVGYLHEGLSPMER 19 0 1 Oxidation (M) _ETLLNGVGYLHEGLSPM(ox)ER_ ETLLNGVGYLHEGLSPM(1)ER ETLLNGVGYLHEGLSPM(52.81)ER 0 1 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.3557 3 711.021128 2130.04155 72962.27 0.86926 0.00061806 -0.059582 -4.2364E-05 0.80968 0.0005757 711.021177840378 714.691719399673 95.555 0.68478 95.555 95.263 95.948 -7.6294E-06 168 54 5 0 0 0 0.00025511 1 58094 52.814 52.814 1 0.77947 0.80254 0 19698000 10926000 8772500 9907 1411 3750 3852 15556 15556 1088 ETLLNSATTSLNSK 14 1 0 Unmodified _ETLLNSATTSLNSK_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2F4 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.8953 2 739.888478 1477.7624 72407.59 0.64033 0.00047377 0.29213 0.00021614 0.93246 0.00068992 739.888558106052 743.895789618902 69.802 0.82896 69.802 69.316 70.145 0 131 68 4 0 0 0 0.00022162 1 41380 66.262 66.262 1 2.6195 2.65 0 8993000 2930800 6062200 9908 721 3751 3853 15557 15557 ETLLNSATTSLNSK 14 1 0 Unmodified _ETLLNSATTSLNSK_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2F4 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.4142 2 739.888478 1477.7624 74638.79 0.71692 0.00053044 -0.20359 -0.00015063 0.51334 0.00037981 739.888310746417 743.895601736008 81.526 0.44508 81.526 81.245 81.691 0 65 21 4 0 0 0 0.05459 1 43346 57.164 57.164 1 1.8492 1.6202 0 1303300 627270 676000 9909 721 3751 3853 15558 15558 ETLPDSGFSANIEDINEADLVRPLLPK 27 1 1 Unmodified _ETLPDSGFSANIEDINEADLVRPLLPK_ 0 0 1 P18583;H7C1M2 P18583 P18583 SON Protein SON MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 991.8527 3 985.17662 2952.50803 62475.6 0.82826 0.00081598 -0.21446 -0.00021128 0.6138 0.00060471 985.844438170284 991.51843446352 124.53 0.45406 124.53 124.28 124.73 0 98 28 6 0 0 0 0.0004744 1 82773 31.819 19.623 1 1.1498 1.2744 0 9053800 3725100 5328600 9910 1499 3752 3854 15559 15559 ETLQLESAAEVGFVR 15 0 1 Unmodified _ETLQLESAAEVGFVR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;V9H0D5;V9H023;V9H0B2;Q0ZAJ2;V9H062;V9H015 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.934 2 824.930677 1647.8468 NaN NaN NaN -0.56245 -0.00046399 NaN NaN NaN NaN 103.72 0.44151 103.72 103.57 104.02 -7.6294E-06 0 0 0 4.8715E-05 1 65753 83.137 67.993 1 NaN NaN 0 5500600 0 5500600 9911 1237 3753 3855 15560 15560 ETMQSLNDR 9 0 1 Unmodified _ETMQSLNDR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__Q92764;C4AM86;CON__Q497I4;A0A024R1T2;Q92764 F8VZY9 F8VZY9 KRT18;KRT35;KRTHA5 Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.2552 2 547.250763 1092.48697 83115.95 0.26396 0.00014445 -0.13652 -7.4711E-05 0.12744 6.974E-05 547.250448358019 552.255426423136 24.737 0.34912 24.737 24.566 24.916 0 40 16 4 0 0 0 0.0063471 1 10435 64.42 39.526 1 0.86343 0.90749 0 11250000 5321500 5928900 9912 316 3754 3856 15561 15561 ETMQSLNDR 9 0 1 Unmodified _ETMQSLNDR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__Q92764;C4AM86;CON__Q497I4;A0A024R1T2;Q92764 F8VZY9 F8VZY9 KRT18;KRT35;KRTHA5 Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.2557 2 547.250763 1092.48697 80127.34 0.45889 0.00025113 -0.43835 -0.00023989 0.02054 1.124E-05 547.250532172449 552.254803092922 27.476 0.46378 27.476 27.292 27.756 0 69 18 6 0 0 0 0.012314 2 10645 57.59 32.667 1 1.8719 1.5653 0 3787400 1441300 2346100 9913 316 3754 3856 15562;15563 15562 ETNISYSQEADDR 13 0 1 Unmodified _ETNISYSQEADDR_ 0 0 0 A0A1B0GWA2;B7Z3Q4;O00116;B7ZAC5;Q53SG6 A0A1B0GWA2 A0A1B0GWA2 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.3362 2 764.331524 1526.64849 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.73 1 30.73 30.23 31.23 0 0 0 0 0.015177 1 15067 50.786 33.35 1 9914 635 3755 3857 15564 15564 ETNISYSQEADDR 13 0 1 Unmodified _ETNISYSQEADDR_ 0 0 0 A0A1B0GWA2;B7Z3Q4;O00116;B7ZAC5;Q53SG6 A0A1B0GWA2 A0A1B0GWA2 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.3376 2 764.331524 1526.64849 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.386 1 30.386 29.886 30.886 -1.9073E-06 0 0 0 0.023736 1 14883 45.077 24.774 1 9915 635 3755 3857 15565 15565 ETNLDSLPLVDTHSK 15 1 0 Unmodified _ETNLDSLPLVDTHSK_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.6245 3 556.95282 1667.83663 81216.68 0.70337 0.00039174 -0.032663 -1.8192E-05 0.67071 0.00037355 556.952875762994 559.624166159973 80.029 0.98764 80.029 79.635 80.623 0 570 84 12 0 0 0 0.00013932 2 47383 42.947 42.947 1 1.3167 1.5446 0 300450000 132550000 167900000 9916 1457 3756 3858 15566;15567 15567 ETNLDSLPLVDTHSK 15 1 0 Unmodified _ETNLDSLPLVDTHSK_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.9257 2 834.925591 1667.83663 65965.33 0.75017 0.00062633 -0.67129 -0.00056048 0.078872 6.5852E-05 835.426139711342 838.932407437092 80.062 0.92835 80.062 79.404 80.332 0 367 79 9 0 0 0 2.5136E-10 1 47392 118.76 95.387 1 1.5561 1.7549 0 131000000 53394000 77602000 9917 1457 3756 3858 15568 15568 ETNLDSLPLVDTHSK 15 1 0 Unmodified _ETNLDSLPLVDTHSK_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.624 3 556.95282 1667.83663 80898.24 0.77689 0.00043269 -0.13157 -7.3278E-05 0.64532 0.00035941 556.952870432508 559.624117717411 78.863 0.83842 78.863 78.493 79.331 7.6294E-06 581 73 13 0 0 0 0.0007329 2 47695 34.612 34.612 1 1.3502 1.5874 0 365010000 156580000 208430000 9918 1457 3756 3858 15569;15570 15569 ETNLDSLPLVDTHSK 15 1 0 Unmodified _ETNLDSLPLVDTHSK_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.4271 2 834.925591 1667.83663 65785.74 0.89443 0.00074678 -0.45701 -0.00038157 0.43742 0.00036521 834.925054876556 838.932343413427 78.815 0.78033 78.815 78.429 79.209 7.6294E-06 422 67 10 0 0 0 4.5804E-17 2 47733 137.84 137.84 1 1.3932 1.6119 0 203810000 86012000 117800000 9919 1457 3756 3858 15571;15572 15572 ETNLDSLPLVDTHSK 15 1 0 Unmodified _ETNLDSLPLVDTHSK_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.6245 3 556.95282 1667.83663 80993.52 0.69543 0.00038732 -0.26847 -0.00014952 0.42696 0.00023779 556.952836146195 559.624037521841 91.19 0.87612 91.19 90.812 91.688 0 423 58 11 0 0 0 0.0077468 1 50515 21.814 21.814 1 3.33 2.8191 0 58913000 13482000 45431000 9920 1457 3756 3858 15573 15573 ETNLDSLPLVDTHSK 15 1 0 Unmodified _ETNLDSLPLVDTHSK_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.9327 2 834.925591 1667.83663 66113.1 0.55793 0.00046583 -0.59095 -0.0004934 -0.033029 -2.7577E-05 834.925829184711 838.93163627939 90.957 0.78016 90.957 90.668 91.448 0 350 48 10 0 0 0 0.00077776 1 49539 50.222 41.917 1 3.8229 3.1731 0 36297000 6598900 29699000 9921 1457 3756 3858 15574 15574 ETNLDSLPLVDTHSK 15 1 0 Unmodified _ETNLDSLPLVDTHSK_ 0 0 0 V9HWE1;P08670;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.6237 3 556.95282 1667.83663 80375.48 0.53347 0.00029712 -0.47034 -0.00026196 0.063131 3.5161E-05 556.952614734271 559.623909090349 90.972 1.2531 90.972 90.648 91.901 0 437 79 10 0 0 0 0.0012757 2 49572 37.182 33.011 1 3.4335 2.8805 0 48073000 11409000 36664000 9922 1457 3756 3858 15575;15576 15575 ETPDKVELSK 10 2 0 Unmodified _ETPDKVELSK_ 0 0 1 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;Q86X79;Q05BL3;Q6PKI5;Q6PIN4 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.3065 2 573.306061 1144.59757 79503.3 0.30366 0.00017409 0.85687 0.00049125 1.1605 0.00066534 573.306293703908 581.320415241199 26.11 0.50068 26.11 25.897 26.398 -1.9073E-06 72 18 6 0 0 0 0.017787 1 9766 65.157 36.939 1 1.3666 1.1771 0 5929300 2492400 3436900 9923 339 3757 3859 15577 15577 ETPDPWQSLDPFDSLESK 18 1 0 Unmodified _ETPDPWQSLDPFDSLESK_ 0 0 0 A0A0A6YYG7;Q6IBW4 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1046.4836 2 1045.98129 2089.94803 60943.34 0.84431 0.00088314 -0.16381 -0.00017134 0.68051 0.0007118 1045.98135431652 1050.48925063191 126.44 0.46064 126.44 126.2 126.66 0 148 28 7 0 0 0 2.6133E-05 1 84263 68.83 68.83 1 0.70108 0.71511 0 12092000 7056900 5034800 9924 491 3758 3860 15578 15578 ETPHSPGVEDAPIAK 15 1 0 Unmodified _ETPHSPGVEDAPIAK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.2661 3 516.594855 1546.76274 82720.23 0.88582 0.00045761 0.025669 1.3261E-05 0.91149 0.00047087 516.594796237371 519.266317180111 38.047 0.46395 38.047 37.882 38.346 0 165 39 6 0 0 0 6.8714E-05 2 19489 55.335 55.335 1 2.8212 3.1565 0 63860000 18254000 45606000 9925 1010 3759 3861 15579;15580 15579 ETPHSPGVEDAPIAK 15 1 0 Unmodified _ETPHSPGVEDAPIAK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.3964 2 774.388645 1546.76274 NaN NaN NaN 0.60499 0.0004685 NaN NaN NaN NaN 38.041 0.27562 38.041 37.923 38.199 0 0 0 0 8.5275E-07 1 19497 95.477 81.27 1 NaN NaN 0 13459000 0 13459000 9926 1010 3759 3861 15581 15581 ETPHSPGVEDAPIAK 15 1 0 Unmodified _ETPHSPGVEDAPIAK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.2667 3 516.594855 1546.76274 83155.23 0.46411 0.00023976 -0.2668 -0.00013783 0.19731 0.00010193 516.594288701996 519.26621930065 36.87 0.57901 36.87 36.671 37.25 0 220 43 8 0 0 0 7.7327E-11 2 19022 89.136 89.136 1 1.6089 1.8138 0 67588000 21841000 45747000 9927 1010 3759 3861 15582;15583 15582 ETPHSPGVEDAPIAK 15 1 0 Unmodified _ETPHSPGVEDAPIAK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.3959 2 774.388645 1546.76274 NaN NaN NaN 0.015052 1.1656E-05 NaN NaN NaN NaN 36.862 0.22775 36.862 36.745 36.972 0 0 0 0 3.6707E-16 1 19033 127.83 111.97 1 NaN NaN 0 16550000 0 16550000 9928 1010 3759 3861 15584 15584 ETPHSPGVEDAPIAK 15 1 0 Unmodified _ETPHSPGVEDAPIAK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.8729 2 774.388645 1546.76274 70901.05 1.0027 0.00077646 0.60657 0.00046972 1.6093 0.0012462 774.389190381997 778.396674917864 37.011 0.096336 37.011 36.982 37.079 0 21 8 5 0 0 0 0.015425 1 19139 48.004 38.317 1 0.48896 0.51193 0 10555000 4702800 5852700 9929 1010 3759 3861 15585 15585 ETPHSPGVEDAPIAK 15 1 0 Unmodified _ETPHSPGVEDAPIAK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.2661 3 516.594855 1546.76274 83625.88 0.19738 0.00010197 -0.11451 -5.9154E-05 0.082876 4.2813E-05 516.594640170308 519.266122526157 43.676 0.87123 43.676 43.248 44.119 0 145 57 5 0 0 0 0.022678 1 20062 16.139 16.139 1 2.8197 2.2509 0 4114200 1423300 2690800 9930 1010 3759 3861 15586 15586 ETPLSNCER 9 0 1 Unmodified _ETPLSNCER_ 0 0 0 B4DXG8;A5PLM5;Q06265;D6R905;D6RA17;D6RAP4 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.2512 2 553.250763 1104.48697 78272.2 0.55384 0.00030641 1.3147 0.00072738 1.8686 0.0010338 553.250701253619 558.254951215798 22.175 0.2074 22.175 22.074 22.281 0 53 10 6 0 0 0 0.010479 1 8307 59.245 55.561 1 0.78901 0.78245 0 8262200 4827700 3434500 9931 675 3760 3862 15587 15587 ETPSSILLGSNQGSVSK 17 1 0 Unmodified _ETPSSILLGSNQGSVSK_ 0 0 0 A0A087WVZ6;H7C4X9;A0A087WYS3 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 856.4504 2 852.444148 1702.87374 67856.81 0.77095 0.00065719 -0.11462 -9.7706E-05 0.65633 0.00055948 852.444605413958 856.450445463824 75.643 0.55101 75.643 75.368 75.919 0 164 47 6 0 0 0 0.0016399 2 44470 39.424 33.931 1 0.61328 0.6324 0 12830000 6992200 5838000 9932 422;1317 3761 3863 15588;15589 15588 ETPSSILLGSNQGSVSK 17 1 0 Unmodified _ETPSSILLGSNQGSVSK_ 0 0 0 A0A087WVZ6;H7C4X9;A0A087WYS3 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.9529 2 852.444148 1702.87374 68924.49 0.66041 0.00056296 -0.18969 -0.0001617 0.47071 0.00040126 852.945189318683 856.952638361036 74.672 0.4271 74.672 74.449 74.876 0 82 37 4 0 0 0 0.00083091 1 44864 45.115 37.011 1 0.673 0.67201 0 15077000 5981300 9095600 9933 422;1317 3761 3863 15590 15590 ETPYSEEDFQHLQK 14 1 0 Unmodified _ETPYSEEDFQHLQK_ 0 0 0 A8K1M4;Q9H081;I3L4K6 A8K1M4 A8K1M4 MIS12 Protein MIS12 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.9407 3 584.268808 1749.78459 80605.77 0.70947 0.00041452 -0.36266 -0.00021189 0.34681 0.00020263 584.268322262785 586.940303617466 52.297 0.78829 52.297 52.098 52.886 0 199 60 7 0 0 0 0.037436 1 29789 20.084 8.6437 1 0.6359 0.64571 0 12788000 7237800 5550000 9934 704 3762 3864 15591 15591 ETQALILAPTR 11 0 1 Unmodified _ETQALILAPTR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.8515 2 606.85097 1211.68739 NaN NaN NaN -0.39283 -0.00023839 NaN NaN NaN NaN 75.165 0.92982 75.165 74.529 75.459 -7.6294E-06 0 0 0 0.0011556 1 44096 85.355 73.129 1 NaN NaN 0 11902000 11902000 0 9935 261 3763 3865 15592 15592 ETQALILAPTR 11 0 1 Unmodified _ETQALILAPTR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.851 2 606.85097 1211.68739 NaN NaN NaN -0.16593 -0.00010069 NaN NaN NaN NaN 73.991 1.2543 73.991 73.071 74.325 0 0 0 0 1.2345E-11 1 44401 119.53 97.442 1 NaN NaN 0 11857000 11857000 0 9936 261 3763 3865 15593 15593 ETQALILAPTR 11 0 1 Unmodified _ETQALILAPTR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.8553 2 606.85097 1211.68739 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.453 1 72.453 71.953 72.953 0 0 0 0 0.011532 1 43492 57.348 43.579 1 9937 261 3763 3865 15594 15594 ETQALILAPTR 11 0 1 Unmodified _ETQALILAPTR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.8511 2 606.85097 1211.68739 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.117 1 73.117 72.617 73.617 0 0 0 0 0.0063949 1 43896 63.415 48.749 1 9938 261 3763 3865 15595 15595 ETQVILLDTPGIISPGK 17 1 0 Unmodified _ETQVILLDTPGIISPGK_ 0 0 0 O75616;J3QSB2;J3QRV9 O75616 O75616 ERAL1 GTPase Era, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 891.0078 2 891.006384 1779.99822 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.67 1 115.67 115.17 116.17 -7.6294E-06 0 0 0 0.00047166 1 75523 88.092 74.665 1 9939 1410 3764 3866 15596 15596 ETQYSFK 7 1 0 Unmodified _ETQYSFK_ 0 0 0 H7BYN4;Q02241;H0YME6;H0YMJ4 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 455.7236 2 451.71635 901.418148 92262 -0.086527 -3.9086E-05 0.39564 0.00017872 0.30911 0.00013963 451.716449864083 455.72342020427 32.858 0.26152 32.858 32.73 32.992 0 32 12 4 0 0 0 0.057145 1 14307 51.787 42.547 1 0.97987 0.80856 0 2350000 973350 1376700 9940 1312 3765 3867 15597 15597 ETSSTGEEALVAAVR 15 0 1 Unmodified _ETSSTGEEALVAAVR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.3872 2 760.383559 1518.75257 69045.68 0.57048 0.00043378 0.82568 0.00062784 1.3962 0.0010616 760.384336311689 765.388422487272 73.903 0.82674 73.903 73.569 74.396 0 382 68 8 0 0 0 2.9329E-15 2 44328 131.12 114.89 1 0.93339 1.0627 0 109400000 56900000 52504000 9941 2038 3766 3868 15598;15599 15599 ETSYEEALANQR 12 0 1 Unmodified _ETSYEEALANQR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;A2A2S5;Q32NB1 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.834 2 705.82842 1409.64229 71107.38 0.55212 0.0003897 0.82873 0.00058494 1.3809 0.00097464 705.828850585527 710.833348112213 45.934 0.36371 45.934 45.659 46.023 0 80 31 4 0 0 0 0.0010242 1 25226 62.303 56.989 1 0.79849 0.79643 0 11626000 5730700 5895400 9942 471 3767 3869 15600 15600 ETSYEEALANQR 12 0 1 Unmodified _ETSYEEALANQR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;A2A2S5;Q32NB1 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.832 2 705.82842 1409.64229 71850.07 0.73641 0.00051978 -0.2088 -0.00014738 0.52761 0.0003724 705.828271250104 710.832246156031 54.711 0.48897 54.711 54.481 54.97 0 138 31 6 0 0 0 0.018707 1 27283 40.589 36.826 1 0.84683 0.73562 0 2240600 1095900 1144700 9943 471 3767 3869 15601 15601 ETSYEEALANQR 12 0 1 Unmodified _ETSYEEALANQR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;A2A2S5;Q32NB1 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.334 2 705.82842 1409.64229 73370.26 0.46925 0.00033121 -0.36754 -0.00025942 0.10171 7.1792E-05 705.828434079299 710.832066097875 55.311 0.47694 55.311 55.12 55.597 0 111 26 6 0 0 0 0.0063345 2 27107 49.3 45.537 1 0.79899 0.69791 0 1822700 983760 838910 9944 471 3767 3869 15602;15603 15603 ETSYGLSFFK 10 1 0 Unmodified _ETSYGLSFFK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.7906 2 589.790047 1177.56554 80099.66 0.91438 0.00053929 -0.0099344 -5.8592E-06 0.90445 0.00053343 589.790113335301 593.796918006368 98.491 1.0534 98.491 97.762 98.816 0 336 85 6 0 0 0 0.00057758 2 60148 84.615 65.832 1 1.2149 1.3233 0 49412000 25742000 23670000 9945 2147 3768 3870 15604;15605 15605 ETTDTDTADQVIASFK 16 1 0 Unmodified _ETTDTDTADQVIASFK_ 0 0 0 A0A0S2Z3G9;O43707;Q96BG6;F5GXS2;H7C144;A0A0S2Z3X3;A0A0S2Z3C0 A0A0S2Z3G9 A0A0S2Z3G9 ACTN4 Alpha-actinin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 875.9216 2 871.409971 1740.80539 64211.13 0.88231 0.00076886 1.9447 0.0016946 2.827 0.0024635 871.411908977335 875.418070869774 93.931 0.42814 93.931 93.758 94.186 0 71 39 4 0 0 0 0.00018401 2 57025 60.628 51.899 1 1.5049 1.5721 0 12154000 5113500 7040300 9946 548 3769 3871 15606;15607 15607 ETTDTDTADQVIASFK 16 1 0 Unmodified _ETTDTDTADQVIASFK_ 0 0 0 A0A0S2Z3G9;O43707;Q96BG6;F5GXS2;H7C144;A0A0S2Z3X3;A0A0S2Z3C0 A0A0S2Z3G9 A0A0S2Z3G9 ACTN4 Alpha-actinin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 875.4183 2 871.409971 1740.80539 64302.52 0.66442 0.00057898 1.4352 0.0012506 2.0996 0.0018296 871.412570623131 875.417834321361 93.356 0.45782 93.356 93.132 93.59 0 109 40 4 0 0 0 2.6627E-05 1 57885 85.554 85.554 1 1.2695 1.2725 0 13846000 5019300 8826600 9947 548 3769 3871 15608 15608 ETTESLHGDISSLK 14 1 0 Unmodified _ETTESLHGDISSLK_ 0 0 0 A0A024R8B6;P35658;Q7Z3C4;A0A0A0MSW3 A0A024R8B6 A0A024R8B6 NUP214;DKFZp686J0330 Nuclear pore complex protein Nup214 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.8855 2 758.87811 1515.74167 NaN NaN NaN 0.011215 8.5106E-06 NaN NaN NaN NaN 46.116 0.16851 46.116 46.086 46.255 -3.8147E-06 0 0 0 6.533E-11 1 25425 117.86 93.829 1 NaN NaN 0 8675700 0 8675700 9948 246 3770 3872 15609 15609 ETTGPGTAGPQSNTTSSLK 19 1 0 Unmodified _ETTGPGTAGPQSNTTSSLK_ 0 0 0 Q5VWN6;Q6IPC8 Q5VWN6 Q5VWN6 FAM208B;C10orf18 Protein FAM208B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 921.4533 2 917.444876 1832.8752 66479.04 0.42372 0.00038874 -0.12868 -0.00011806 0.29504 0.00027068 917.946214827787 921.45220869266 36.066 0.40641 36.066 35.794 36.201 0 125 35 5 0 0 0 0.057223 1 15617 31.089 31.089 1 2.1038 1.7091 0 2902200 1228300 1673900 9949 1833 3771 3873 15610 15610 ETTYYDVLGVKPNATQEELK 20 2 0 Unmodified _ETTYYDVLGVKPNATQEELK_ 0 0 1 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.0563 3 766.721512 2297.14271 71556.54 0.31993 0.00024529 -0.16462 -0.00012622 0.15531 0.00011908 767.055689362619 772.064139093597 89.259 0.75085 89.259 88.912 89.663 0 213 63 6 0 0 0 2.984E-06 1 53836 53.553 53.553 1 1.0786 1.2814 0 24969000 11332000 13637000 9950 1535 3772 3874 15611 15611 ETTYYDVLGVKPNATQEELK 20 2 0 Unmodified _ETTYYDVLGVKPNATQEELK_ 0 0 1 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.3907 3 766.721512 2297.14271 NaN NaN NaN -0.34372 -0.00026354 NaN NaN NaN NaN 89.107 0.075394 89.107 89.049 89.124 0 0 0 0 0.0083415 1 53793 32.035 24.043 1 NaN NaN 0 4949800 4949800 0 9951 1535 3772 3874 15612 15612 ETTYYDVLGVKPNATQEELK 20 2 0 Unmodified _ETTYYDVLGVKPNATQEELK_ 0 0 1 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.0554 3 766.721512 2297.14271 70151.01 0.49634 0.00038055 -0.24241 -0.00018586 0.25393 0.00019469 767.055633052172 772.398008181022 88.383 0.51523 88.383 88.106 88.621 0 201 47 6 0 0 0 8.3496E-05 1 54417 38.942 38.942 1 1.0371 1.1993 0 36416000 15465000 20951000 9952 1535 3772 3874 15613 15613 ETTYYDVLGVKPNATQEELK 20 2 0 Unmodified _ETTYYDVLGVKPNATQEELK_ 0 0 1 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.0569 3 766.721512 2297.14271 68634.73 0.57528 0.00044108 -0.18459 -0.00014153 0.39069 0.00029955 767.055621205556 772.064070936893 102.27 0.47209 102.27 102.03 102.5 7.6294E-06 203 35 8 0 0 0 6.6984E-05 2 57952 41.136 41.136 1 0.80692 0.69064 0 9581200 5563800 4017500 9953 1535 3772 3874 15614;15615 15615 ETTYYDVLGVKPNATQEELK 20 2 0 Unmodified _ETTYYDVLGVKPNATQEELK_ 0 0 1 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 767.0558 3 766.721512 2297.14271 68491.01 0.61861 0.0004743 -0.12717 -9.7505E-05 0.49144 0.0003768 767.055562286961 772.064399165902 102.09 0.45375 102.09 101.88 102.34 7.6294E-06 201 35 8 0 0 0 0.00035631 1 56970 35.973 35.973 1 0.68769 0.58075 0 10000000 5243400 4757000 9954 1535 3772 3874 15616 15616 ETTYYDVLGVKPNATQEELKK 21 3 0 Unmodified _ETTYYDVLGVKPNATQEELKK_ 0 0 2 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 817.7675 3 809.419833 2425.23767 68197.64 0.54752 0.00044317 -0.56957 -0.00046102 -0.022055 -1.7851E-05 809.753165302593 817.433767833569 87.684 0.46511 87.684 87.46 87.926 0 133 28 7 0 0 0 0.00065993 1 48294 35.748 35.748 1 0.70793 0.66302 0 3487500 1797900 1689600 9955 1535 3773 3875 15617 15617 ETTYYDVLGVKPNATQEELKK 21 3 0 Unmodified _ETTYYDVLGVKPNATQEELKK_ 0 0 2 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 809.7543 3 809.419833 2425.23767 67104.88 0.58427 0.00047292 0.23419 0.00018956 0.81846 0.00066248 809.754095188162 817.768515040144 87.572 0.40935 87.572 87.378 87.788 0 152 23 9 0 0 0 0.0045182 2 47329 27.61 24.466 1 0.8106 0.8017 0 4218800 2375200 1843600 9956 1535 3773 3875 15618;15619 15619 ETVEEQVSTTER 12 0 1 Unmodified _ETVEEQVSTTER_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.3335 2 704.333535 1406.65252 NaN NaN NaN -0.57814 -0.0004072 NaN NaN NaN NaN 31.389 0.7223 31.389 31.027 31.75 1.9073E-06 0 0 0 5.8937E-20 1 15372 136.02 117.35 1 NaN NaN 0 14527000 14527000 0 9957 1718 3774 3876 15620 15620 ETVEEQVSTTER 12 0 1 Unmodified _ETVEEQVSTTER_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.3389 2 704.333535 1406.65252 74360.36 0.66755 0.00047018 0.13711 9.6574E-05 0.80466 0.00056675 704.33338259119 709.337769731656 30.857 0.64223 30.857 30.458 31.1 -1.9073E-06 254 55 6 0 0 0 2.9541E-29 3 15148 167.09 136.4 1 0.77778 0.85051 0 30535000 15490000 15045000 9958 1718 3774 3876 15621;15622;15623 15623 ETVEEQVSTTER 12 0 1 Unmodified _ETVEEQVSTTER_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.3342 2 704.333535 1406.65252 72624.74 0.49136 0.00034608 0.1708 0.0001203 0.66215 0.00046638 704.33358119897 709.337698288484 36.755 0.64511 36.755 36.367 37.012 0 296 57 8 0 0 0 0.0002099 1 16435 80.763 70.81 1 0.8877 0.72576 0 16029000 8819300 7209400 9959 1718 3774 3876 15624 15624 ETVEEQVSTTER 12 0 1 Unmodified _ETVEEQVSTTER_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.334 2 704.333535 1406.65252 72685.52 0.40739 0.00028694 0.019598 1.3803E-05 0.42699 0.00030074 704.333461959087 709.337654629074 36.986 0.71035 36.986 36.66 37.371 0 353 60 8 0 0 0 1.1652E-18 2 16208 149.33 114.18 1 0.95734 0.79054 0 14537000 7375800 7161200 9960 1718 3774 3876 15625;15626 15626 ETVIQFLER 9 0 1 Unmodified _ETVIQFLER_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.816 2 567.811313 1133.60807 81561.59 0.67587 0.00038377 -0.048864 -2.7745E-05 0.62701 0.00035602 567.810742717637 572.815354958678 104.97 0.75452 104.97 104.58 105.34 0 203 61 5 0 0 0 0.00016983 1 64787 107.57 68.783 1 1.3443 1.4098 0 12195000 5350700 6844500 9961 1392 3775 3877 15627 15627 ETVIQFLER 9 0 1 Unmodified _ETVIQFLER_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.8157 2 567.811313 1133.60807 82723.88 0.66422 0.00037715 -0.26933 -0.00015293 0.39489 0.00022422 567.810694753053 572.81523187444 104.19 0.75491 104.19 103.72 104.48 7.6294E-06 289 63 6 0 0 0 0.0014178 3 65802 85.67 49.367 1 1.1927 1.1838 0 11955000 4761700 7193400 9962 1392 3775 3877 15628;15629;15630 15628 ETVIQFLER 9 0 1 Unmodified _ETVIQFLER_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.8161 2 567.811313 1133.60807 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.69 1 116.69 116.19 117.19 0 0 0 0 0.0089737 1 67699 64.654 42.968 1 9963 1392 3775 3877 15631 15631 ETVNSPAIYK 10 1 0 Unmodified _ETVNSPAIYK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.3018 2 561.295496 1120.57644 NaN NaN NaN -0.39083 -0.00021937 NaN NaN NaN NaN 41.248 0.47982 41.248 40.926 41.406 -3.8147E-06 0 0 0 0.0014063 1 21645 86.136 58.998 1 NaN NaN 0 38675000 0 38675000 9964 2132 3776 3878 15632 15632 ETVNSPAIYK 10 1 0 Unmodified _ETVNSPAIYK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.2957 2 561.295496 1120.57644 NaN NaN NaN 0.35521 0.00019938 NaN NaN NaN NaN 47.585 0.77442 47.585 47.207 47.981 3.8147E-06 0 0 0 0.0020806 1 23036 82.452 60.321 1 NaN NaN 0 2413400 2413400 0 9965 2132 3776 3878 15633 15633 ETVNSPAIYK 10 1 0 Unmodified _ETVNSPAIYK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.2949 2 561.295496 1120.57644 NaN NaN NaN -0.13214 -7.4171E-05 NaN NaN NaN NaN 47.919 0.74021 47.919 47.453 48.193 0 0 0 0 0.015203 1 22671 57.96 39.177 1 NaN NaN 0 1848500 1848500 0 9966 2132 3776 3878 15634 15634 ETVSEESNVLCLSK 14 1 0 Unmodified _ETVSEESNVLCLSK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.394 2 797.885078 1593.7556 67706.3 0.64016 0.00051077 -0.26456 -0.00021109 0.37559 0.00029968 797.885136150537 801.89201938216 74.409 1.0556 74.409 74.049 75.105 0 351 87 7 0 0 0 2.6687E-05 3 43468 96.64 89.709 1 2.9323 3.2943 0 69157000 17950000 51207000 9967 1478 3777 3879 15635;15636;15637 15635 ETVSEESNVLCLSK 14 1 0 Unmodified _ETVSEESNVLCLSK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.8854 2 797.885078 1593.7556 68037.87 0.64502 0.00051465 -0.21484 -0.00017142 0.43017 0.00034323 797.885124987128 801.89212094152 73.303 0.75881 73.303 72.978 73.737 0 376 64 8 0 0 0 7.1736E-10 2 43943 122.7 122.7 1 2.972 3.3351 0 76920000 18518000 58403000 9968 1478 3777 3879 15638;15639 15639 ETVSEESNVLCLSK 14 1 0 Unmodified _ETVSEESNVLCLSK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 802.394 2 797.885078 1593.7556 68243.54 0.57714 0.00046049 -0.36004 -0.00028727 0.2171 0.00017322 797.885076660824 801.891886017621 85.143 1.1768 85.143 84.873 86.05 7.6294E-06 274 74 8 0 0 0 0.00053191 2 46419 60.161 54.438 1 2.3725 1.8773 0 18379000 5366600 13012000 9969 1478 3777 3879 15640;15641 15640 ETVSEESNVLCLSK 14 1 0 Unmodified _ETVSEESNVLCLSK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 797.8857 2 797.885078 1593.7556 68026.45 0.6347 0.00050641 -0.094937 -7.5749E-05 0.53976 0.00043067 797.885233062282 801.892242242592 85.383 0.66763 85.383 85.035 85.703 0 260 41 9 0 0 0 0.0020067 2 45885 49.627 49.627 1 2.4694 1.9831 0 14876000 4217700 10658000 9970 1478 3777 3879 15642;15643 15643 ETVYCLNDDDETEVLK 16 1 0 Unmodified _ETVYCLNDDDETEVLK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 972.4339 2 971.932953 1941.85135 61274.03 0.307 0.00029839 0.21713 0.00021104 0.52413 0.00050942 971.933314155036 975.940249795194 85.712 0.84702 85.712 85.306 86.153 0 528 70 11 0 0 0 6.1034E-25 2 51306 146.36 142.02 1 0.32275 0.36385 0 113400000 83041000 30361000 9971 1476 3778 3880 15644;15645 15644 ETVYCLNDDDETEVLK 16 1 0 Unmodified _ETVYCLNDDDETEVLK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.941 2 971.932953 1941.85135 60978.39 0.58477 0.00056836 0.011929 1.1594E-05 0.5967 0.00057995 971.933080928609 975.940110526999 85.034 0.85435 85.034 84.641 85.496 7.6294E-06 524 72 9 0 0 0 1.4811E-06 2 52093 95.417 92.194 1 0.32905 0.3702 0 120450000 91277000 29174000 9972 1476 3778 3880 15646;15647 15647 ETVYCLNDDDETEVLK 16 1 0 Unmodified _ETVYCLNDDDETEVLK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 971.9326 2 971.932953 1941.85135 62007.39 0.0093835 9.1201E-06 0.7969 0.00077454 0.80629 0.00078366 971.934153717126 975.94078945652 98.293 1.0587 98.293 97.951 99.01 0 427 65 12 0 0 0 0.0077221 1 55246 34.768 34.768 1 0.35393 0.29137 0 40124000 29213000 10911000 9973 1476 3778 3880 15648 15648 ETVYCLNDDDETEVLK 16 1 0 Unmodified _ETVYCLNDDDETEVLK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 972.4337 2 971.932953 1941.85135 61907.93 0.17616 0.00017122 0.41299 0.0004014 0.58916 0.00057262 971.933807571572 975.940470412542 98.28 1.1625 98.28 97.924 99.086 0 479 69 12 0 0 0 0.013577 1 54412 31.881 31.881 1 0.34181 0.28468 0 40099000 29909000 10190000 9974 1476 3778 3880 15649 15649 ETVYCLNDDDETEVLKEDIIQGFR 24 1 1 Unmodified _ETVYCLNDDDETEVLKEDIIQGFR_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 968.121 3 967.786804 2900.33858 61319.9 0.088758 8.5899E-05 0.28243 0.00027333 0.37119 0.00035923 968.12127786602 974.129052517324 129.87 0.59886 129.87 129.6 130.2 0 211 27 12 0 0 0 4.6548E-12 2 78601 69.72 69.72 1 0.30284 0.26211 0 15135000 11406000 3728800 9975 1476 3779 3881 15650;15651 15651 ETVYCLNDDDETEVLKEDIIQGFR 24 1 1 Unmodified _ETVYCLNDDDETEVLKEDIIQGFR_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 968.4547 3 967.786804 2900.33858 61743.97 0.45721 0.00044248 0.39461 0.0003819 0.85182 0.00082438 968.121624926779 974.462663036533 129.78 0.6153 129.78 129.48 130.09 0 135 22 11 0 0 0 5.0592E-21 2 77602 108.08 108.08 1 0.31497 0.26668 0 13148000 9999000 3148900 9976 1476 3779 3881 15652;15653 15652 ETYDSSSLPALLFK 14 1 0 Unmodified _ETYDSSSLPALLFK_ 0 0 0 Q71F23;A8K8D2 Q71F23 Q71F23 CENPU Centromere protein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.9034 2 785.903596 1569.79264 69084.25 0.86133 0.00067692 0.67857 0.00053329 1.5399 0.0012102 786.405424546348 789.911732686439 118.03 0.51714 118.03 117.78 118.3 0 112 30 5 0 0 0 0.0077958 1 75590 39.785 33.252 1 0.67724 0.67283 0 9567900 5809300 3758600 9977 1866 3780 3882 15654 15654 ETYDSSSLPALLFK 14 1 0 Unmodified _ETYDSSSLPALLFK_ 0 0 0 Q71F23;A8K8D2 Q71F23 Q71F23 CENPU Centromere protein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.9109 2 785.903596 1569.79264 68416.97 0.69766 0.0005483 2.2294 0.0017521 2.9271 0.0023004 785.903642633814 789.910533767713 129.93 0.65022 129.93 129.6 130.25 0 160 29 10 0 0 0 0.0041879 2 78670 45.879 39.776 1 1.4683 1.1623 0 4982400 2112100 2870300 9978 1866 3780 3882 15655;15656 15655 ETYDSSSLPALLFK 14 1 0 Unmodified _ETYDSSSLPALLFK_ 0 0 0 Q71F23;A8K8D2 Q71F23 Q71F23 CENPU Centromere protein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 790.4127 2 785.903596 1569.79264 69482.9 1.0513 0.00082623 1.7852 0.001403 2.8365 0.0022292 785.903613760755 789.910791099352 129.79 0.76245 129.79 129.33 130.09 0 132 24 9 0 0 0 0.0016198 2 77658 52.391 46.287 1 1.3822 1.132 0 5417900 2556300 2861500 9979 1866 3780 3882 15657;15658 15658 ETYEALLAR 9 0 1 Unmodified _ETYEALLAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.2828 2 533.282389 1064.55022 82681.85 0.55378 0.00029532 -0.14228 -7.5873E-05 0.4115 0.00021945 533.28226658887 538.286211380272 71.614 1.2559 71.614 71.063 72.319 0 449 104 9 0 0 0 0.0013285 2 41736 86.833 57.457 1 0.81744 0.95908 0 219350000 117510000 101840000 9980 69 3781 3883 15659;15660 15659 ETYEALLAR 9 0 1 Unmodified _ETYEALLAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.2825 2 533.282389 1064.55022 82413.08 0.53766 0.00028672 -0.10551 -5.6265E-05 0.43215 0.00023046 533.282309702706 538.28631234213 70.341 0.86969 70.341 70.049 70.918 0 407 67 9 0 0 0 0.00016083 2 41908 107.9 60.152 1 0.84925 0.97962 0 235430000 128880000 106540000 9981 69 3781 3883 15661;15662 15661 ETYEALLAR 9 0 1 Unmodified _ETYEALLAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.2826 2 533.282389 1064.55022 81596.3 0.47843 0.00025514 0.044123 2.353E-05 0.52256 0.00027867 533.282434763229 538.286415548706 82.015 1.0025 82.015 81.576 82.579 0 339 59 10 0 0 0 0.03089 1 44434 45.68 29.169 1 1.6814 1.4487 0 63829000 23563000 40267000 9982 69 3781 3883 15663 15663 ETYEALLAR 9 0 1 Unmodified _ETYEALLAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.2864 2 533.282389 1064.55022 81778.79 0.39073 0.00020837 0.1362 7.2633E-05 0.52692 0.000281 533.282492741415 538.286481330563 82.215 1.1647 82.215 81.888 83.053 0 343 69 11 0 0 0 0.001665 2 43734 82.452 57.53 1 1.6824 1.4678 0 53738000 20391000 33347000 9983 69 3781 3883 15664;15665 15664 ETYLGPNEVLK 11 1 0 Unmodified _ETYLGPNEVLK_ 0 0 0 A0A024R363;Q9UK61 A0A024R363;Q9UK61 A0A024R363 C3orf63;FAM208A Protein FAM208A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.844 2 631.834985 1261.65542 78414.7 0.67909 0.00042907 0.21422 0.00013535 0.89331 0.00056443 631.834842585936 635.842305245342 75.85 0.396 75.85 75.627 76.023 0 87 34 4 0 0 0 0.0015533 2 44630 66.621 56.916 1 1.1524 1.1869 0 10819000 5410600 5408800 9984 129;2105 3782 3884 15666;15667 15666 EVAALCR 7 0 1 Unmodified _EVAALCR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 409.7134 2 409.713088 817.411622 94434.38 0.28561 0.00011702 0.49983 0.00020479 0.78544 0.00032181 409.713308001723 414.717168269762 26.42 0.42382 26.42 26.215 26.639 0 92 25 5 0 0 0 0.02091 1 11830 93.593 45.351 1 0.38405 0.40432 0 39930000 28690000 11240000 9985 82 3783 3885 15668 15668 EVAATEEDVTR 11 0 1 Unmodified _EVAATEEDVTR_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.2971 2 610.293682 1218.57281 78904.38 0.64663 0.00039464 0.053726 3.2788E-05 0.70036 0.00042743 610.293331404684 615.297766202518 27.205 0.28606 27.205 27.031 27.317 0 32 13 4 0 0 0 6.168E-10 1 12440 128.27 98.015 1 2.4028 2.5387 0 3989400 1118400 2871000 9986 640 3784 3886 15669 15669 EVAATEEDVTR 11 0 1 Unmodified _EVAATEEDVTR_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.2985 2 610.293682 1218.57281 NaN NaN NaN -0.20293 -0.00012385 NaN NaN NaN NaN 26.778 0.33803 26.778 26.588 26.926 0 0 0 0 0.0011644 2 12187 85.29 56.594 1 NaN NaN 0 5093800 0 5093800 9987 640 3784 3886 15670;15671 15670 EVAEELNVNHSTVVR 15 0 1 Unmodified _EVAEELNVNHSTVVR_ 0 0 0 B9ZVV8;B4DND2;Q96H41;Q53H47 B9ZVV8 B9ZVV8 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.9395 2 848.436658 1694.85876 77409.45 0.89311 0.00075774 -0.24967 -0.00021183 0.64343 0.00054591 848.436631133525 853.941544219644 51.603 0.17131 51.603 51.464 51.636 0 30 14 4 0 0 0 0.024922 1 28509 28.806 28.806 1 0.99608 1.0196 0 6619900 4444500 2175400 9988 1011 3785 3887 15672 15672 EVAFFNNFLTDAK 13 1 0 Unmodified _EVAFFNNFLTDAK_ 0 0 0 Q9BXP5;H7C3A1;Q7Z4Y3;A0A0A0MSP6 Q9BXP5 Q9BXP5 SRRT Serrate RNA effector molecule homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.3862 2 758.377549 1514.74054 NaN NaN NaN 0.43447 0.00032949 NaN NaN NaN NaN 117.87 0.51455 117.87 117.67 118.18 0 0 0 0 4.3161E-06 1 77378 102.53 83.751 1 NaN NaN 0 12506000 0 12506000 9989 2013 3786 3888 15673 15673 EVAFFNNFLTDAK 13 1 0 Unmodified _EVAFFNNFLTDAK_ 0 0 0 Q9BXP5;H7C3A1;Q7Z4Y3;A0A0A0MSP6 Q9BXP5 Q9BXP5 SRRT Serrate RNA effector molecule homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 762.3857 2 758.377549 1514.74054 NaN NaN NaN 1.5708 0.0011913 NaN NaN NaN NaN 130.31 0.52229 130.31 130.04 130.56 0 0 0 0 0.014098 2 78917 51.013 40.49 1 NaN NaN 0 1307900 0 1307900 9990 2013 3786 3888 15674;15675 15675 EVASNSELVQSSR 13 0 1 Unmodified _EVASNSELVQSSR_ 0 0 0 CON__P08779;P08779;Q16195;K7ENW6 CON__P08779 CON__P08779 KRT16;keratin Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3498 2 703.34952 1404.68449 NaN NaN NaN 0.26213 0.00018437 NaN NaN NaN NaN 30.546 0.55133 30.546 30.219 30.771 0 0 0 0 1.3579E-20 1 14840 164.33 75.255 1 NaN NaN 0 17533000 17533000 0 + 9991 1159 3787 3889 15676 15676 EVASNSELVQSSR 13 0 1 Unmodified _EVASNSELVQSSR_ 0 0 0 CON__P08779;P08779;Q16195;K7ENW6 CON__P08779 CON__P08779 KRT16;keratin Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.3507 2 703.34952 1404.68449 NaN NaN NaN 0.034899 2.4546E-05 NaN NaN NaN NaN 29.998 0.64136 29.998 29.7 30.341 -1.9073E-06 0 0 0 1.9934E-09 3 14538 148.19 69.033 1 NaN NaN 0 20773000 20773000 0 + 9992 1159 3787 3889 15677;15678;15679 15678 EVATAIR 7 0 1 Unmodified _EVATAIR_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 380.2215 2 380.221603 758.428653 94500.08 -0.52275 -0.00019876 0.41186 0.0001566 -0.11089 -4.2164E-05 380.221660184431 385.225861591961 24.54 0.37162 24.54 24.296 24.668 0 51 13 6 0 0 0 0.011218 1 10247 108.98 5.6987 1 0.97244 0.99473 0 35567000 16475000 19092000 9993 1485 3788 3890 15680 15680 EVATNSELVQSGK 13 1 0 Unmodified _EVATNSELVQSGK_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q04695;Q04695;F5GWP8;Q14666;K7ESE1 CON__P02533;CON__Q04695 CON__P02533 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3488 2 681.348988 1360.68342 73568.06 0.73369 0.0004999 -0.071353 -4.8616E-05 0.66234 0.00045128 681.348801572965 685.355964133432 32.315 0.67324 32.315 32.112 32.785 0 218 60 6 0 0 0 1.4773E-24 2 15945 162.38 144.91 1 0.037326 0.04225 0 88336000 85295000 3041500 + 9994 1150;1168 3789 3891 15681;15682 15681 EVATNSELVQSGK 13 1 0 Unmodified _EVATNSELVQSGK_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q04695;Q04695;F5GWP8;Q14666;K7ESE1 CON__P02533;CON__Q04695 CON__P02533 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3491 2 681.348988 1360.68342 NaN NaN NaN -1.0737 -0.00073154 NaN NaN NaN NaN 31.95 0.93564 31.95 31.448 32.384 1.9073E-06 0 0 0 4.7774E-14 1 16061 124.67 95.292 1 NaN NaN 0 28073000 28073000 0 + 9995 1150;1168 3789 3891 15683 15683 EVATNSELVQSGK 13 1 0 Unmodified _EVATNSELVQSGK_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q04695;Q04695;F5GWP8;Q14666;K7ESE1 CON__P02533;CON__Q04695 CON__P02533 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.3486 2 681.348988 1360.68342 72763.51 0.49516 0.00033738 -0.26327 -0.00017938 0.23188 0.00015799 681.348599696215 685.356049488844 37.342 0.86191 37.342 36.902 37.764 0 304 66 9 0 0 0 4.5595E-07 2 16758 112.13 112.13 1 0.16284 0.13051 0 21004000 18192000 2812500 + 9996 1150;1168 3789 3891 15684;15685 15684 EVATNSELVQSGK 13 1 0 Unmodified _EVATNSELVQSGK_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q04695;Q04695;F5GWP8;Q14666;K7ESE1 CON__P02533;CON__Q04695 CON__P02533 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.3497 2 681.348988 1360.68342 73530.27 0.42295 0.00028817 0.021858 1.4893E-05 0.4448 0.00030307 681.348874282272 685.356169107822 37.462 0.90952 37.462 37.043 37.953 0 353 75 7 0 0 0 3.8666E-09 2 16423 121.36 121.36 1 0.15784 0.12653 0 19419000 16592000 2826800 + 9997 1150;1168 3789 3891 15686;15687 15686 EVCEQNQQLLR 11 0 1 Unmodified _EVCEQNQQLLR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.8488 2 708.848632 1415.68271 70219.4 0.77939 0.00055247 -0.57593 -0.00040824 0.20346 0.00014422 708.848469930039 713.852474042298 40.385 0.36621 40.385 40.167 40.533 -3.8147E-06 168 31 7 0 0 0 3.3571E-31 2 21097 184.49 173 1 0.83448 0.95098 0 117920000 63781000 54136000 9998 1803 3790 3892 15688;15689 15688 EVCEQNQQLLR 11 0 1 Unmodified _EVCEQNQQLLR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.8492 2 708.848632 1415.68271 71472.02 0.67297 0.00047703 -0.38419 -0.00027233 0.28878 0.0002047 708.848664118041 713.852654342143 39.336 0.32785 39.336 39.149 39.477 0 177 29 7 0 0 0 1.8465E-41 2 20791 199.29 187.8 1 0.79376 0.9098 0 82881000 48908000 33973000 9999 1803 3790 3892 15690;15691 15691 EVCEQNQQLLR 11 0 1 Unmodified _EVCEQNQQLLR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.8535 2 708.848632 1415.68271 70415.29 0.52448 0.00037178 -0.15696 -0.00011126 0.36752 0.00026052 708.848488635969 713.852948406244 46.232 0.59236 46.232 45.939 46.531 0 238 42 9 0 0 0 1.0915E-10 2 22177 136.27 127.31 1 1.5637 1.2777 0 14028000 5867800 8160400 10000 1803 3790 3892 15692;15693 15692 EVCEQNQQLLR 11 0 1 Unmodified _EVCEQNQQLLR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.8484 2 708.848632 1415.68271 70971.77 0.38737 0.00027459 0.16735 0.00011863 0.55472 0.00039321 708.848748179345 714.354865129733 46.273 0.65386 46.273 46.04 46.694 0 169 38 6 0 0 0 2.2944E-12 1 21687 140.5 129.01 1 1.5882 1.3227 0 7038500 3589500 3449000 10001 1803 3790 3892 15694 15694 EVCGFAPYER 10 0 1 Unmodified _EVCGFAPYER_ 0 0 0 Q9Y3U8;J3QSB5 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.2775 2 614.27678 1226.53901 73831.78 0.59212 0.00036372 -0.15859 -9.742E-05 0.43352 0.0002663 614.276773039177 619.280845220983 56.824 0.99525 56.824 56.537 57.532 0 492 82 9 0 0 0 1.0257E-11 2 31954 138.4 123.14 1 0.80981 0.93893 0 171700000 91495000 80205000 10002 2140 3791 3893 15695;15696 15696 EVCGFAPYER 10 0 1 Unmodified _EVCGFAPYER_ 0 0 0 Q9Y3U8;J3QSB5 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.2813 2 614.27678 1226.53901 73433.7 0.2254 0.00013846 0.27285 0.00016761 0.49825 0.00030606 614.276951012427 619.281169681383 55.907 1.0572 55.907 55.563 56.62 0 526 81 9 0 0 0 0.0033685 2 31997 64.841 52.886 1 0.79674 0.9158 0 199500000 110940000 88556000 10003 2140 3791 3893 15697;15698 15698 EVCGFAPYER 10 0 1 Unmodified _EVCGFAPYER_ 0 0 0 Q9Y3U8;J3QSB5 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.2809 2 614.27678 1226.53901 73727.69 0.58456 0.00035908 0.071948 4.4196E-05 0.65651 0.00040328 614.276915827415 619.280950244327 65.787 1.3688 65.787 65.474 66.843 0 439 87 9 0 0 0 0.0073167 2 34085 57.598 52.289 1 0.75367 0.63305 0 26469000 15210000 11260000 10004 2140 3791 3893 15699;15700 15700 EVCGFAPYER 10 0 1 Unmodified _EVCGFAPYER_ 0 0 0 Q9Y3U8;J3QSB5 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 619.2813 2 614.27678 1226.53901 76734.08 0.36049 0.00022144 0.18857 0.00011583 0.54906 0.00033728 614.276987315844 619.281032550848 66.304 1.1182 66.304 65.952 67.07 0 430 72 9 0 0 0 0.0078188 2 33529 56.916 45.694 1 0.71202 0.60978 0 20820000 12690000 8130500 10005 2140 3791 3893 15701;15702 15702 EVDATSPAPSTSSTVK 16 1 0 Unmodified _EVDATSPAPSTSSTVK_ 0 0 0 D3DUZ3;Q16666;H3BM18;X6RHM1 D3DUZ3 D3DUZ3 IFI16 Gamma-interferon-inducible protein 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.3887 2 788.888674 1575.7628 NaN NaN NaN -1.0582 -0.00083479 NaN NaN NaN NaN 32.526 0.35974 32.526 32.319 32.679 0 0 0 0 0.0349 1 16096 38.021 24.251 1 NaN NaN 0 5498600 5498600 0 10006 1196 3792 3894 15703 15703 EVDATSPAPSTSSTVK 16 1 0 Unmodified _EVDATSPAPSTSSTVK_ 0 0 0 D3DUZ3;Q16666;H3BM18;X6RHM1 D3DUZ3 D3DUZ3 IFI16 Gamma-interferon-inducible protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.8956 2 788.888674 1575.7628 69509.46 0.53554 0.00042248 -0.13082 -0.0001032 0.40472 0.00031928 788.888530185017 792.895620428994 37.501 0.41225 37.501 37.321 37.733 3.8147E-06 139 29 6 0 0 0 0.00015189 1 16887 64.55 64.55 1 1.1913 0.94434 0 4724100 2187600 2536500 10007 1196 3792 3894 15704 15704 EVDATSPAPSTSSTVK 16 1 0 Unmodified _EVDATSPAPSTSSTVK_ 0 0 0 D3DUZ3;Q16666;H3BM18;X6RHM1 D3DUZ3 D3DUZ3 IFI16 Gamma-interferon-inducible protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.8879 2 788.888674 1575.7628 68560.23 0.46573 0.00036741 -0.098688 -7.7854E-05 0.36705 0.00028956 788.888675299777 792.895734535365 37.789 0.49961 37.789 37.533 38.033 0 196 40 7 0 0 0 0.0009647 2 16535 62.799 62.799 1 1.2347 0.96747 0 3771000 1831600 1939400 10008 1196 3792 3894 15705;15706 15706 EVDDLGPEVGDIK 13 1 0 Unmodified _EVDDLGPEVGDIK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3439 2 693.343372 1384.67219 72253.8 0.47524 0.00032951 0.64614 0.000448 1.1214 0.00077751 693.343497437752 697.350633758628 77.649 0.55138 77.649 77.322 77.873 0 186 43 5 0 0 0 0.00011239 2 45810 99.568 99.568 1 1.1201 1.0991 0 22847000 11231000 11617000 10009 1379 3793 3895 15707;15708 15708 EVDDLGPEVGDIK 13 1 0 Unmodified _EVDDLGPEVGDIK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.3427 2 693.343372 1384.67219 71606.68 0.46456 0.0003221 0.47605 0.00033007 0.94061 0.00065217 693.343182495672 697.350661612763 76.711 0.54982 76.711 76.471 77.021 0 164 40 5 0 0 0 3.1697E-06 2 46274 108.7 108.7 1 1.0778 1.0903 0 28914000 14421000 14494000 10010 1379 3793 3895 15709;15710 15710 EVDDLGPEVGDIK 13 1 0 Unmodified _EVDDLGPEVGDIK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.3436 2 693.343372 1384.67219 72757.16 0.7274 0.00050434 -0.066694 -4.6242E-05 0.66071 0.0004581 693.343322438603 697.350354107087 88.637 0.7139 88.636 88.306 89.02 -7.6294E-06 207 45 6 0 0 0 0.012996 1 48862 38.791 38.791 1 1.2905 1.0293 0 6854400 2753100 4101300 10011 1379 3793 3895 15711 15711 EVDDLGPEVGDIK 13 1 0 Unmodified _EVDDLGPEVGDIK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.3441 2 693.343372 1384.67219 73480.95 0.35014 0.00024277 0.58692 0.00040694 0.93706 0.00064971 693.343847370285 697.350683936004 88.728 0.62611 88.728 88.414 89.041 0 195 39 7 0 0 0 0.0029083 2 48102 61.344 52.155 1 1.2805 1.0462 0 5600500 2582900 3017700 10012 1379 3793 3895 15712;15713 15713 EVDDLTAELK 10 1 0 Unmodified _EVDDLTAELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.791 2 566.790244 1131.56593 79496.05 0.61252 0.00034717 0.0051772 2.9344E-06 0.6177 0.0003501 566.790253011399 570.797286259958 72.052 1.214 72.052 71.509 72.723 7.6294E-06 418 95 9 0 0 0 3.6561E-12 2 42033 146.23 78.251 1 0.86647 1.017 0 303750000 158490000 145260000 10013 2070 3794 3896 15714;15715 15714 EVDDLTAELK 10 1 0 Unmodified _EVDDLTAELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.7908 2 566.790244 1131.56593 79761.02 0.63021 0.0003572 0.021747 1.2326E-05 0.65196 0.00036952 566.790249773223 570.797274251503 70.899 0.98909 70.899 70.524 71.513 0 426 74 10 0 0 0 9.7206E-05 2 42294 97.431 32.729 1 0.85822 1.0061 0 324400000 174410000 150000000 10014 2070 3794 3896 15716;15717 15717 EVDDLTAELK 10 1 0 Unmodified _EVDDLTAELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.798 2 566.790244 1131.56593 80303.98 0.5164 0.00029269 0.14622 8.2873E-05 0.66262 0.00037557 566.790283438175 570.797389023631 82.2 1.4068 82.2 81.821 83.227 0 478 85 10 0 0 0 0.012557 2 44512 50.473 21.057 1 1.7781 1.517 0 65030000 23827000 41204000 10015 2070 3794 3896 15718;15719 15718 EVDDLTAELK 10 1 0 Unmodified _EVDDLTAELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.7906 2 566.790244 1131.56593 79845.16 0.37538 0.00021276 0.25292 0.00014335 0.6283 0.00035611 566.790370505375 570.797443223774 82.419 1.3071 82.419 81.986 83.293 0 420 69 9 0 0 0 0.00074284 2 43894 81.95 36.615 1 1.8132 1.5325 0 57799000 20295000 37505000 10016 2070 3794 3896 15720;15721 15721 EVDEDTTVTIPSAVYVAQLYHQVSK 25 1 0 Unmodified _EVDEDTTVTIPSAVYVAQLYHQVSK_ 0 0 0 B4E086;K7EJH0;K7EMX1;Q8NBT2 B4E086 B4E086 SPC24 Kinetochore protein Spc24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.4716 3 931.471145 2791.39161 63867.39 0.67227 0.0006262 0.93116 0.00086735 1.6034 0.0014936 932.14004151753 934.480115953448 119.14 0.59109 119.14 118.74 119.33 7.6294E-06 121 39 7 0 0 0 0.040597 1 78600 11.853 11.853 1 0.87574 0.88928 0 12785000 6558900 6226100 10017 1061 3795 3897 15722 15722 EVDEDTTVTIPSAVYVAQLYHQVSK 25 1 0 Unmodified _EVDEDTTVTIPSAVYVAQLYHQVSK_ 0 0 0 B4E086;K7EJH0;K7EMX1;Q8NBT2 B4E086 B4E086 SPC24 Kinetochore protein Spc24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 934.476 3 931.471145 2791.39161 63052.92 0.93406 0.00087005 -0.2106 -0.00019617 0.72346 0.00067389 932.139964089245 934.475710767946 132.05 0.50198 132.05 131.79 132.29 0 140 23 9 0 0 0 0.041368 2 80293 11.632 11.632 1 1.029 0.81136 0 5522600 2369400 3153200 10018 1061 3795 3897 15723;15724 15724 EVDEDTTVTIPSAVYVAQLYHQVSK 25 1 0 Unmodified _EVDEDTTVTIPSAVYVAQLYHQVSK_ 0 0 0 B4E086;K7EJH0;K7EMX1;Q8NBT2 B4E086 B4E086 SPC24 Kinetochore protein Spc24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 932.2158 3 931.471145 2791.39161 62654.74 0.95813 0.00089247 0.80046 0.00074561 1.7586 0.0016381 931.806713857953 934.47687987404 131.86 0.42542 131.86 131.56 131.99 0 101 15 10 0 0 0 0.00044592 2 79120 31.819 31.819 1 1.0829 0.88187 0 6810700 3464000 3346700 10019 1061 3795 3897 15725;15726 15725 EVDEISPEDDQR 12 0 1 Unmodified _EVDEISPEDDQR_ 0 0 0 A0A087WWP4;Q96T37 A0A087WWP4 A0A087WWP4 RBM15 Putative RNA-binding protein 15 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.3207 2 716.315342 1430.61613 NaN NaN NaN -0.25062 -0.00017952 NaN NaN NaN NaN 34.36 0.32923 34.36 34.203 34.533 0 0 0 0 2.076E-08 1 17206 112.36 81.793 1 NaN NaN 0 2267600 0 2267600 10020 427 3796 3898 15727 15727 EVDEQMLAIQSK 12 1 0 Oxidation (M) _EVDEQM(ox)LAIQSK_ EVDEQM(1)LAIQSK EVDEQM(44.02)LAIQSK 0 1 0 Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q9BV28;Q9BUF5 Q9BUF5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.8508 2 703.845224 1405.6759 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.695 1 46.695 46.195 47.195 0 0 0 0 0.017286 1 25265 44.024 33.652 1 10021 2004;502 3797 3899 15728 15728 347 EVDEQMLAIQSK 12 1 0 Oxidation (M) _EVDEQM(ox)LAIQSK_ EVDEQM(1)LAIQSK EVDEQM(93.1)LAIQSK 0 1 0 Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q9BV28;Q9BUF5 Q9BUF5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.8521 2 703.845224 1405.6759 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.895 1 46.895 46.395 47.395 0 0 0 0 2.036E-05 1 25390 93.096 74.871 1 10022 2004;502 3797 3899 15729 15729 347 EVDEQMLNVQNK 12 1 0 Oxidation (M) _EVDEQM(ox)LNVQNK_ EVDEQM(1)LNVQNK EVDEQM(176.38)LNVQNK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.347 2 731.845755 1461.67696 70008.17 0.6367 0.00046597 -0.25395 -0.00018585 0.38275 0.00028011 731.845706308109 735.852787563078 33.852 0.83099 33.852 33.361 34.192 0 523 80 10 0 0 0 7.4889E-38 2 16724 176.38 176.38 1 2.1368 2.4083 0 127410000 41470000 85939000 10023 1452;1660;1723 3798 3900 15730;15731 15731 1155 EVDEQMLNVQNK 12 1 0 Oxidation (M) _EVDEQM(ox)LNVQNK_ EVDEQM(1)LNVQNK EVDEQM(262.48)LNVQNK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.8534 2 731.845755 1461.67696 69320.46 0.53988 0.00039511 -0.0024785 -1.8139E-06 0.5374 0.0003933 731.845780727317 735.852981104645 34.308 0.61168 34.308 34.032 34.644 0 358 51 10 0 0 0 1.8487E-122 2 17108 262.48 262.48 1 2.0661 2.4152 0 280780000 86637000 194140000 10024 1452;1660;1723 3798 3900 15732;15733 15732 1155 EVDEQMLNVQNK 12 1 0 Oxidation (M) _EVDEQM(ox)LNVQNK_ EVDEQM(1)LNVQNK EVDEQM(115.71)LNVQNK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.8474 2 731.845755 1461.67696 69257.54 0.42912 0.00031405 0.078482 5.7436E-05 0.5076 0.00037148 731.846020737433 735.853019266789 33.257 0.85316 33.257 32.922 33.775 0 390 73 10 0 0 0 2.0806E-08 2 16497 115.71 106.71 1 2.1963 2.5735 0 317670000 95874000 221800000 10025 1452;1660;1723 3798 3900 15734;15735 15735 1155 EVDEQMLNVQNK 12 1 0 Oxidation (M) _EVDEQM(ox)LNVQNK_ EVDEQM(1)LNVQNK EVDEQM(280.96)LNVQNK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.8535 2 731.845755 1461.67696 70691.91 0.58841 0.00043062 -0.062878 -4.6017E-05 0.52553 0.00038461 731.845808942522 735.852893756446 33.656 0.5392 33.656 33.442 33.982 0 260 43 8 0 0 0 1.0541E-162 3 16946 280.96 274.98 1 1.9958 2.3473 0 371300000 123190000 248110000 10026 1452;1660;1723 3798 3900 15736;15737;15738 15736 1155 EVDEQMLNVQNK 12 1 0 Oxidation (M) _EVDEQM(ox)LNVQNK_ EVDEQM(1)LNVQNK EVDEQM(151.22)LNVQNK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.8529 2 731.845755 1461.67696 69730.26 0.38851 0.00028433 -0.5821 -0.000426 -0.19359 -0.00014168 731.845608229238 735.852642430118 39.448 0.573 39.448 39.174 39.747 0 261 43 9 0 0 0 8.5339E-23 2 18053 151.22 147.46 1 0.79181 0.61654 0 15620000 9015600 6604100 10027 1452;1660;1723 3798 3900 15739;15740 15739 1155 EVDEQMLNVQNK 12 1 0 Oxidation (M) _EVDEQM(ox)LNVQNK_ EVDEQM(1)LNVQNK EVDEQM(93.65)LNVQNK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.8531 2 731.845755 1461.67696 NaN NaN NaN 0.10387 7.6016E-05 NaN NaN NaN NaN 64.186 0.55522 64.186 63.908 64.463 0 0 0 0 1.6805E-05 1 32986 93.649 77.758 1 NaN NaN 0 2550300 0 2550300 10028 1452;1660;1723 3798 3900 15741 15741 1155 EVDEQMLNVQNK 12 1 0 Oxidation (M) _EVDEQM(ox)LNVQNK_ EVDEQM(1)LNVQNK EVDEQM(193.01)LNVQNK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.8459 2 731.845755 1461.67696 69821.02 0.37636 0.00027543 -0.71995 -0.0005269 -0.3436 -0.00025146 731.845376238724 735.852337505215 39.228 0.51854 39.228 38.945 39.463 0 273 39 10 0 0 0 2.5688E-48 2 17407 193.01 188.96 1 0.82401 0.66186 0 15392000 8755100 6636600 10029 1452;1660;1723 3798 3900 15742;15743 15743 1155 EVDEQMLNVQNK 12 1 0 Oxidation (M) _EVDEQM(ox)LNVQNK_ EVDEQM(1)LNVQNK EVDEQM(81.97)LNVQNK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.853 2 731.845755 1461.67696 69500.34 0.38455 0.00028143 0.030908 2.262E-05 0.41546 0.00030405 731.845942059268 735.852959231324 39.691 0.49683 39.691 39.463 39.96 0 255 38 9 0 0 0 0.00010457 1 17743 81.972 81.972 1 0.76546 0.61486 0 17455000 9282000 8172700 10030 1452;1660;1723 3798 3900 15744 15744 1155 EVDEQMLNVQNK 12 1 0 Oxidation (M) _EVDEQM(ox)LNVQNK_ EVDEQM(1)LNVQNK EVDEQM(40.72)LNVQNK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.8533 2 731.845755 1461.67696 NaN NaN NaN 0.099039 7.2482E-05 NaN NaN NaN NaN 64.831 0.53951 64.831 64.581 65.121 0 0 0 0 0.018458 1 32614 40.724 29.894 1 NaN NaN 0 2334200 0 2334200 10031 1452;1660;1723 3798 3900 15745 15745 1155 EVDEQMLNVQNK 12 1 0 Unmodified _EVDEQMLNVQNK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.8557 2 723.848298 1445.68204 77988.28 0.54876 0.00039722 0.28318 0.00020498 0.83194 0.0006022 723.848369112973 727.855673317679 55.105 0.53709 55.105 54.812 55.349 0 183 52 6 0 0 0 1.6095E-37 1 30952 175.88 168.32 1 1.4222 1.4171 0 18974000 8876800 10097000 10032 1452;1660;1723 3798 3901 15746 15746 EVDEQMLNVQNK 12 1 0 Unmodified _EVDEQMLNVQNK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.8484 2 723.848298 1445.68204 73303.54 0.60382 0.00043707 0.22659 0.00016402 0.83041 0.00060109 724.350381558421 727.85563645207 54.282 0.54778 54.282 54.032 54.58 3.8147E-06 196 46 6 0 0 0 3.5872E-20 2 31082 150.53 141.1 1 1.3159 1.4104 0 21293000 10595000 10698000 10033 1452;1660;1723 3798 3901 15747;15748 15748 EVDEQMLNVQNK 12 1 0 Unmodified _EVDEQMLNVQNK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.8558 2 723.848298 1445.68204 71462.99 0.51955 0.00037607 -0.1021 -7.3907E-05 0.41744 0.00030217 723.848293391955 727.855371849405 64.199 0.7781 64.199 63.852 64.631 0 401 60 9 0 0 0 0.0032069 2 32912 56.632 53.1 1 1.4832 1.1702 0 17838000 7287100 10551000 10034 1452;1660;1723 3798 3901 15749;15750 15749 EVDEQMLNVQNK 12 1 0 Unmodified _EVDEQMLNVQNK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q1KSF8;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q5JP53;Q8IZ29;Q13885 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.8552 2 723.848298 1445.68204 71116.43 0.4267 0.00030886 -0.025273 -1.8294E-05 0.40142 0.00029057 723.848408329787 727.855347892742 64.845 0.71381 64.845 64.503 65.217 0 389 58 9 0 0 0 0.00011876 1 32593 94.692 90.241 1 1.4792 1.1884 0 16090000 6231900 9857800 10035 1452;1660;1723 3798 3901 15751 15751 EVDGLDVSK 9 1 0 Unmodified _EVDGLDVSK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.2526 2 481.245472 960.476391 NaN NaN NaN 0.36964 0.00017789 NaN NaN NaN NaN 38.564 0.30995 38.564 38.353 38.663 0 0 0 0 0.00085356 1 20256 89.355 56.884 1 NaN NaN 0 9209200 0 9209200 10036 1729 3799 3902 15752 15752 EVDIGIPDATGR 12 0 1 Unmodified _EVDIGIPDATGR_ 0 0 0 V9HW80;P55072;Q96IF9;Q0IIN5 V9HW80 V9HW80 HEL-S-70;VCP Transitional endoplasmic reticulum ATPase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.8195 2 621.819867 1241.62518 78160.38 0.39824 0.00024763 -0.055219 -3.4336E-05 0.34302 0.00021329 621.819514950107 626.823870713884 90.557 0.55572 90.557 90.343 90.899 0 85 28 5 0 0 0 0.0042139 1 49403 54.066 42.846 1 0.78258 0.68205 0 1486900 700230 786640 10037 1613 3800 3903 15753 15753 EVDNLYNIEILR 12 0 1 Unmodified _EVDNLYNIEILR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.8976 2 745.896106 1489.77766 70606.45 1.2233 0.00091247 -0.088777 -6.6219E-05 1.1345 0.00084625 745.89602588077 750.900143785599 110.44 0.74622 110.44 110.12 110.87 0 272 52 7 0 0 0 3.6698E-29 3 69249 164.97 144.98 1 0.99546 1.1787 0 392660000 185410000 207250000 10038 1789 3801 3904 15754;15755;15756 15756 EVDNLYNIEILR 12 0 1 Unmodified _EVDNLYNIEILR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.902 2 745.896106 1489.77766 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.11 1 111.11 110.61 111.61 0 0 0 0 0.054214 1 69883 42.001 26.429 1 10039 1789 3801 3904 15757 15757 EVDNLYNIEILR 12 0 1 Unmodified _EVDNLYNIEILR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.9007 2 745.896106 1489.77766 70261.45 0.88255 0.00065829 0.24901 0.00018574 1.1316 0.00084403 745.895995714629 750.900309553979 109.93 0.90105 109.93 109.52 110.43 0 372 53 12 0 0 0 2.9541E-29 4 70599 167.09 134.77 1 0.93215 1.0862 0 460970000 231380000 229590000 10040 1789 3801 3904 15758;15759;15760;15761 15759 EVDNLYNIEILR 12 0 1 Unmodified _EVDNLYNIEILR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 746.3982 2 745.896106 1489.77766 69857.38 0.9747 0.00072702 -0.085974 -6.4128E-05 0.88873 0.0006629 745.896109511071 750.900070874122 121.63 1.179 121.63 121.23 122.4 0 361 57 11 0 0 0 0.00011931 2 72254 94.66 94.66 1 1.4003 1.2101 0 104070000 44031000 60039000 10041 1789 3801 3904 15762;15763 15763 EVDNLYNIEILR 12 0 1 Unmodified _EVDNLYNIEILR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 745.8981 2 745.896106 1489.77766 69536.16 0.77036 0.00057461 0.14671 0.00010943 0.91707 0.00068404 745.896230552989 750.900229950282 121.42 1.0328 121.42 121.11 122.14 -7.6294E-06 369 52 12 0 0 0 6.259E-13 2 71251 133.81 109.78 1 1.428 1.2464 0 90097000 37395000 52702000 10042 1789 3801 3904 15764;15765 15765 EVDNTLSLEHQK 12 1 0 Unmodified _EVDNTLSLEHQK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.8635 2 706.854438 1411.69432 NaN NaN NaN -0.40544 -0.00028659 NaN NaN NaN NaN 33.374 0.26945 33.374 33.237 33.506 0 0 0 0 0.029218 1 16541 47.844 32.642 1 NaN NaN 0 6207300 0 6207300 10043 1565 3802 3905 15766 15766 EVDNTLSLEHQK 12 1 0 Unmodified _EVDNTLSLEHQK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.8557 2 706.854438 1411.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.219 1 33.219 32.719 33.719 0 0 0 0 0.017581 1 16530 52.79 33.003 1 10044 1565 3802 3905 15767 15767 EVDNTLSLEHQK 12 1 0 Unmodified _EVDNTLSLEHQK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.8616 2 706.854438 1411.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.767 1 32.767 32.267 33.267 0 0 0 0 7.2093E-11 1 16326 115.78 64.715 1 10045 1565 3802 3905 15768 15768 EVDNTLSLEHQK 12 1 0 Unmodified _EVDNTLSLEHQK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.8608 2 706.854438 1411.69432 73403.87 0.34466 0.00024363 0.25246 0.00017845 0.59713 0.00042208 706.854501708248 710.861554618782 38.231 0.40649 38.231 38.042 38.449 0 118 29 6 0 0 0 0.05568 1 16814 34.773 24.25 1 1.9338 1.5813 0 1873900 676260 1197600 10046 1565 3802 3905 15769 15769 EVDYSDSLTEK 11 1 0 Unmodified _EVDYSDSLTEK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.2931 2 643.293347 1284.57214 75659.32 0.83914 0.00053981 -0.18115 -0.00011653 0.65799 0.00042328 643.292860533787 647.300516853915 44.783 0.74704 44.783 44.482 45.229 0 213 67 4 0 0 0 5.2696E-08 2 24077 117.01 113.88 1 0.86412 0.91045 0 30757000 17421000 13336000 10047 695 3803 3906 15770;15771 15771 EVDYSDSLTEK 11 1 0 Unmodified _EVDYSDSLTEK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.2933 2 643.293347 1284.57214 74844.52 1.0089 0.00064902 -0.25344 -0.00016303 0.75546 0.00048599 643.292997588998 647.300232791101 44.095 0.75909 44.095 43.735 44.494 0 253 66 6 0 0 0 7.8874E-05 1 23951 98.048 93.633 1 0.68803 0.70221 0 31294000 16066000 15228000 10048 695 3803 3906 15772 15772 EVDYSDSLTEK 11 1 0 Unmodified _EVDYSDSLTEK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.2928 2 643.293347 1284.57214 75657.88 0.3612 0.00023235 0.30884 0.00019867 0.67003 0.00043103 643.293469241834 647.300765600121 51.974 0.82806 51.974 51.66 52.488 -3.8147E-06 284 68 6 0 0 0 0.010084 1 25623 49.06 41.411 1 1.9728 1.5642 0 4343700 1484800 2858900 10049 695 3803 3906 15773 15773 EVDYSDSLTEK 11 1 0 Unmodified _EVDYSDSLTEK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.3015 2 643.293347 1284.57214 75250.2 0.42343 0.00027239 0.15498 9.9695E-05 0.57841 0.00037208 643.293263796069 647.300739118119 52.62 0.78651 52.62 52.25 53.036 -3.8147E-06 284 64 5 0 0 0 0.010239 1 25472 48.981 48.981 1 1.7964 1.4079 0 3776300 1511100 2265200 10050 695 3803 3906 15774 15774 EVEAQLPEK 9 1 0 Unmodified _EVEAQLPEK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.7742 2 521.774396 1041.53424 82670.25 0.47501 0.00024785 -0.69539 -0.00036284 -0.22038 -0.00011499 521.774314992659 525.7813619958 36.561 0.7086 36.561 36.285 36.993 0 245 66 6 0 0 0 0.0010484 2 18475 90.709 51.222 1 0.9576 1.036 0 35878000 19257000 16620000 10051 695 3804 3907 15775;15776 15775 EVEAQLPEK 9 1 0 Unmodified _EVEAQLPEK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.782 2 521.774396 1041.53424 82624.43 0.67861 0.00035408 -0.53731 -0.00028036 0.1413 7.3725E-05 521.774635030926 525.781247999983 35.81 0.69689 35.81 35.405 36.102 3.8147E-06 237 59 6 0 0 0 0.00092483 2 18219 92.439 71.7 1 0.90564 0.98899 0 40278000 20381000 19897000 10052 695 3804 3907 15777;15778 15777 EVEAQLPEK 9 1 0 Unmodified _EVEAQLPEK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.7817 2 521.774396 1041.53424 83168.59 0.16971 8.8548E-05 -0.12632 -6.5908E-05 0.04339 2.264E-05 521.774536810349 525.781477497967 41.593 0.56945 41.593 41.327 41.896 0 172 44 6 0 0 0 0.0011452 2 19310 89.355 74.686 1 2.0436 1.6166 0 5066200 1912500 3153700 10053 695 3804 3907 15779;15780 15779 EVEAQLPEK 9 1 0 Unmodified _EVEAQLPEK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.7818 2 521.774396 1041.53424 NaN NaN NaN -0.88762 -0.00046314 NaN NaN NaN NaN 41.671 0.79399 41.671 41.374 42.168 0 0 0 0 0.0059748 1 18857 73.248 31.596 1 NaN NaN 0 1907000 0 1907000 10054 695 3804 3907 15781 15781 EVEAVIPDHCIFASNTSALPISEIAAVSK 29 1 0 Unmodified _EVEAVIPDHCIFASNTSALPISEIAAVSK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1023.8611 3 1023.52514 3067.5536 60939.03 0.42841 0.00043849 0.20457 0.00020938 0.63298 0.00064787 1024.19367393673 1026.53094186473 122.96 0.55648 122.96 122.71 123.26 7.6294E-06 242 42 10 0 0 0 0.0059054 1 79696 22.399 22.399 1 1.3336 1.384 0 17003000 8397800 8605400 10055 1228 3805 3908 15782 15782 EVEAVIPDHCIFASNTSALPISEIAAVSK 29 1 0 Unmodified _EVEAVIPDHCIFASNTSALPISEIAAVSK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1023.8598 3 1023.52514 3067.5536 60188.57 0.43565 0.0004459 0.41818 0.00042802 0.85383 0.00087392 1024.19405988047 1026.53131099945 122.4 0.46025 122.4 122.22 122.68 0 200 36 8 0 0 0 1.2994E-10 2 81285 50.029 50.029 1 1.1777 1.2147 0 18262000 9107500 9154900 10056 1228 3805 3908 15783;15784 15784 EVEEISLLQPQVEESVLNLGK 21 1 0 Unmodified _EVEEISLLQPQVEESVLNLGK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1181.6355 2 1177.12849 2352.24242 57829.09 0.41531 0.00048888 -0.76912 -0.00090535 -0.3538 -0.00041647 1178.13042452753 1181.63675169757 128.77 0.14426 128.77 128.65 128.79 0 22 6 6 0 0 0 3.2456E-05 2 83986 69.03 66.396 1 0.73976 0.74524 0 7181900 3642000 3539900 10057 785 3806 3909 15785;15786 15786 EVEEISLLQPQVEESVLNLGK 21 1 0 Unmodified _EVEEISLLQPQVEESVLNLGK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1177.1296 2 1177.12849 2352.24242 55388.46 -0.37311 -0.0004392 -0.41544 -0.00048903 -0.78855 -0.00092823 1177.62991070582 1181.63629385997 129.23 0.77957 129.23 128.85 129.63 0 325 61 10 0 0 0 1.2185E-06 2 84407 73.415 73.415 1 0.74485 0.85444 0 195650000 117210000 78444000 10058 785 3806 3909 15787;15788 15787 EVEEISLLQPQVEESVLNLGK 21 1 0 Unmodified _EVEEISLLQPQVEESVLNLGK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1181.6353 2 1177.12849 2352.24242 55673.48 -0.09117 -0.00010732 -0.50813 -0.00059814 -0.5993 -0.00070546 1177.62991743867 1181.63645563332 128.94 0.73439 128.94 128.56 129.29 -1.5259E-05 513 63 10 0 0 0 0.00043708 2 85955 53.869 53.869 1 0.79285 0.91745 0 204920000 112460000 92454000 10059 785 3806 3909 15789;15790 15789 EVEEISLLQPQVEESVLNLGK 21 1 0 Unmodified _EVEEISLLQPQVEESVLNLGK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1177.229 2 1177.12849 2352.24242 56139.97 0.49345 0.00058086 -0.34074 -0.00040109 0.15271 0.00017976 1177.62859620676 1181.63707965561 134.73 0.30467 134.73 134.59 134.9 0 26 6 9 0 0 0 1.8981E-34 1 81466 122.78 122.78 1 1.0065 0.87031 0 228820000 104250000 124570000 10060 785 3806 3909 15791 15791 EVEIQSHLR 9 0 1 Unmodified _EVEIQSHLR_ 0 0 0 O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 374.2041 3 370.86825 1109.58292 105658.7 0.24761 9.1829E-05 0.18643 6.9142E-05 0.43404 0.00016097 370.868001589264 374.204485648352 31.573 0.34748 31.573 31.402 31.75 0 68 32 4 0 0 0 0.024043 1 15559 27.303 10.635 1 1.1314 1.1678 0 6196500 2767000 3429500 10061 1369 3807 3910 15792 15792 EVEIQSHLR 9 0 1 Unmodified _EVEIQSHLR_ 0 0 0 O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.7989 2 555.798737 1109.58292 82862.68 0.70799 0.0003935 -1.2518 -0.00069574 -0.5438 -0.00030225 555.798085544405 560.803173406736 31.552 0.51637 31.552 31.411 31.927 1.9073E-06 66 48 4 0 0 0 0.010363 1 15576 59.35 42.574 1 1.2217 1.2179 0 8107600 3822100 4285500 10062 1369 3807 3910 15793 15793 EVEIQSHLR 9 0 1 Unmodified _EVEIQSHLR_ 0 0 0 O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4 O14965 O14965 AURKA Aurora kinase A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.803 2 555.798737 1109.58292 NaN NaN NaN -0.30155 -0.0001676 NaN NaN NaN NaN 30.747 0.39401 30.747 30.622 31.016 0 0 0 0 0.0028277 1 15128 79.713 23.702 1 NaN NaN 0 8581500 0 8581500 10063 1369 3807 3910 15794 15794 EVEIQSHLR 9 0 1 Unmodified _EVEIQSHLR_ 0 0 0 O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.8042 2 555.798737 1109.58292 82214.8 0.2604 0.00014473 -1.3025 -0.0007239 -1.0421 -0.00057917 555.798484667562 560.80295726281 35.715 0.51043 35.715 35.498 36.008 0 124 41 5 0 0 0 0.050778 1 15893 37.722 24.075 1 0.77217 0.6764 0 1845900 994780 851100 10064 1369 3807 3910 15795 15795 EVEIVASSDSSISSK 15 1 0 Unmodified _EVEIVASSDSSISSK_ 0 0 0 Q6P2E9;B7Z7V8 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.392 2 769.383225 1536.7519 NaN NaN NaN 0.14003 0.00010773 NaN NaN NaN NaN 56.537 0.32413 56.537 56.434 56.758 0 0 0 0 9.0085E-32 2 31830 143.79 114.32 1 NaN NaN 0 5002400 0 5002400 10065 1853 3808 3911 15796;15797 15796 EVELVSE 7 0 0 Unmodified _EVELVSE_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.3981 1 804.398541 803.391264 NaN NaN NaN -0.14513 -0.00011674 NaN NaN NaN NaN 63.247 0.91095 63.247 62.783 63.694 -3.8147E-06 0 0 0 4.0235E-27 1 36403 176.25 169.63 1 10066 1398 3809 3912 15798 15798 EVEQFDVATHLQTAPELVDR 20 0 1 Unmodified _EVEQFDVATHLQTAPELVDR_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.0573 3 766.385123 2296.13354 69219.2 0.55806 0.00042769 -0.21891 -0.00016777 0.33915 0.00025992 766.719407632184 770.0555392955 99.139 0.70844 99.139 98.802 99.511 -7.6294E-06 374 57 8 0 0 0 3.1258E-41 2 60560 158.74 144.58 1 0.95579 1.0623 0 73777000 39719000 34058000 10067 2132 3810 3913 15799;15800 15800 EVEQFDVATHLQTAPELVDR 20 0 1 Unmodified _EVEQFDVATHLQTAPELVDR_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.3855 3 766.385123 2296.13354 69058.37 0.76294 0.0005847 -0.08867 -6.7955E-05 0.67427 0.00051675 766.719367000908 770.055527476171 98.398 0.63356 98.398 98.103 98.737 -7.6294E-06 355 54 8 0 0 0 9.0187E-14 2 61427 109.89 102.18 1 0.95518 1.0969 0 191140000 98623000 92515000 10068 2132 3810 3913 15801;15802 15801 EVEQFDVATHLQTAPELVDR 20 0 1 Unmodified _EVEQFDVATHLQTAPELVDR_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1149.0781 2 1149.07405 2296.13354 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.441 1 98.441 97.941 98.941 0 0 0 0 0.0035395 1 61581 43.184 36.302 1 10069 2132 3810 3913 15803 15803 EVEQFDVATHLQTAPELVDR 20 0 1 Unmodified _EVEQFDVATHLQTAPELVDR_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.0576 3 766.385123 2296.13354 69337.42 0.86071 0.00065964 -0.033547 -2.571E-05 0.82716 0.00063393 766.719358633568 770.055472162532 111.36 0.57831 111.36 111.1 111.68 -7.6294E-06 196 26 11 0 0 0 2.5264E-13 2 64447 104.86 97.146 1 0.96309 0.81918 0 34801000 17257000 17544000 10070 2132 3810 3913 15804;15805 15805 EVEQFDVATHLQTAPELVDR 20 0 1 Unmodified _EVEQFDVATHLQTAPELVDR_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 770.0557 3 766.385123 2296.13354 69373.72 0.79422 0.00060868 -0.18894 -0.0001448 0.60528 0.00046388 766.385054418721 770.055379461546 111.26 0.45174 111.26 111.04 111.5 7.6294E-06 165 20 11 0 0 0 3.6136E-07 2 63441 76.704 68.992 1 0.98947 0.86311 0 32112000 16809000 15303000 10071 2132 3810 3913 15806;15807 15806 EVEVEVESMDK 11 1 0 Oxidation (M) _EVEVEVESM(ox)DK_ EVEVEVESM(1)DK EVEVEVESM(94.8)DK 0 1 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.7971 2 655.295033 1308.57551 75964.27 0.77151 0.00050557 0.28773 0.00018855 1.0592 0.00069412 655.294644510127 659.302548720742 36.557 0.47018 36.557 36.303 36.773 0 138 43 5 0 0 0 7.4513E-05 1 18466 94.804 62.484 1 1.8282 1.7985 0 19927000 6820200 13107000 10072 618 3811 3914 15808 15808 470 EVEVEVESMDK 11 1 0 Oxidation (M) _EVEVEVESM(ox)DK_ EVEVEVESM(1)DK EVEVEVESM(110.14)DK 0 1 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.2948 2 655.295033 1308.57551 75153.84 1.0376 0.00067991 -0.37622 -0.00024654 0.66135 0.00043338 655.294153959355 659.302060243893 35.783 0.55117 35.783 35.462 36.013 0 154 45 6 0 0 0 3.2079E-06 1 18248 110.14 49.163 1 1.678 1.7972 0 21238000 8273800 12964000 10073 618 3811 3914 15809 15809 470 EVEVIGGADK 10 1 0 Unmodified _EVEVIGGADK_ 0 0 0 B5BUF9;B5BU32;A0A024R8N6;P04183 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.7753 2 508.766571 1015.51859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.295 1 35.295 34.795 35.795 0 0 0 0 0.00046099 1 17989 72.607 26.927 1 10074 252 3812 3915 15810 15810 EVFEMATR 8 0 1 Oxidation (M) _EVFEM(ox)ATR_ EVFEM(1)ATR EVFEM(47.75)ATR 0 1 0 B4DKN9;Q5JR08;A0A024R324;A0A024R0I3;P61586;P08134;Q9BVT0;A0A0B6XK12 B4DKN9 B4DKN9 RHOC;RHOA;hCG_2043376;ARHA Transforming protein RhoA;Rho-related GTP-binding protein RhoC MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.7383 2 499.734217 997.453881 84095.22 -0.28653 -0.00014319 1.0518 0.00052562 0.76528 0.00038244 499.734443082691 504.738615102404 29.27 0.30094 29.27 29.069 29.37 0 43 18 4 0 0 0 0.018905 1 14129 47.749 32.967 1 1.417 1.4652 0 23495000 9715100 13780000 10075 48 3813 3916 15811 15811 27 EVFEMATR 8 0 1 Oxidation (M) _EVFEM(ox)ATR_ EVFEM(1)ATR EVFEM(45.68)ATR 0 1 0 B4DKN9;Q5JR08;A0A024R324;A0A024R0I3;P61586;P08134;Q9BVT0;A0A0B6XK12 B4DKN9 B4DKN9 RHOC;RHOA;hCG_2043376;ARHA Transforming protein RhoA;Rho-related GTP-binding protein RhoC MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.7343 2 499.734217 997.453881 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.631 1 29.631 29.131 30.131 -1.9073E-06 0 0 0 0.035825 1 14381 45.68 27.545 1 10076 48 3813 3916 15812 15812 27 EVFEMATR 8 0 1 Oxidation (M) _EVFEM(ox)ATR_ EVFEM(1)ATR EVFEM(51.74)ATR 0 1 0 B4DKN9;Q5JR08;A0A024R324;A0A024R0I3;P61586;P08134;Q9BVT0;A0A0B6XK12 B4DKN9 B4DKN9 RHOC;RHOA;hCG_2043376;ARHA Transforming protein RhoA;Rho-related GTP-binding protein RhoC ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.7382 2 499.734217 997.453881 NaN NaN NaN 1.1877 0.00059355 NaN NaN NaN NaN 28.696 0.34818 28.696 28.511 28.859 0 0 0 0 0.014148 1 13717 51.736 27.537 1 NaN NaN 0 3054200 0 3054200 10077 48 3813 3916 15813 15813 27 EVFGDDSEISK 11 1 0 Unmodified _EVFGDDSEISK_ 0 0 0 B4DLS8;Q53GV6;B2R791;O43395 B4DLS8 B4DLS8 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.2902 2 613.282783 1224.55101 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.027 1 49.027 48.527 49.527 -3.8147E-06 0 0 0 0.0065062 1 26838 63.283 42.954 1 10078 848 3814 3917 15814 15814 EVFSMAGVVVR 11 0 1 Oxidation (M) _EVFSM(ox)AGVVVR_ EVFSM(1)AGVVVR EVFSM(118.5)AGVVVR 0 1 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7 M0QZM1;P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.3235 2 605.318448 1208.62234 76207.59 0.51876 0.00031402 -0.40909 -0.00024763 0.10967 6.6386E-05 605.819915054307 610.322464296987 71.184 1.1758 71.184 70.801 71.977 0 258 99 6 0 0 0 2.1044E-08 1 41504 118.5 95.067 1 1.8642 1.9072 0 31964000 6178500 25785000 10079 1599;1354 3815 3918 15815 15815 1012 EVFSMAGVVVR 11 0 1 Oxidation (M) _EVFSM(ox)AGVVVR_ EVFSM(1)AGVVVR EVFSM(76.83)AGVVVR 0 1 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7 M0QZM1;P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.3228 2 605.318448 1208.62234 76818.51 0.45362 0.00027458 -0.67922 -0.00041115 -0.2256 -0.00013656 605.318439053721 610.322391913795 69.752 1.5954 69.752 68.958 70.553 0 491 132 6 0 0 0 0.0002225 2 41223 76.827 59.007 1 2.0362 2.3697 0 60479000 27801000 32678000 10080 1599;1354 3815 3918 15816;15817 15816 1012 EVFSMAGVVVR 11 0 1 Unmodified _EVFSMAGVVVR_ 0 0 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7 M0QZM1;P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.3218 2 597.320991 1192.62743 79927.09 0.76322 0.00045589 0.17072 0.00010198 0.93395 0.00055787 597.321055691067 602.325166586384 110.81 0.49782 110.81 110.58 111.08 0 74 21 6 0 0 0 0.015772 2 64118 46.158 39.622 1 1.0855 0.92071 0 2911100 1248000 1663200 10081 1599;1354 3815 3919 15818;15819 15819 EVFSMAGVVVR 11 0 1 Unmodified _EVFSMAGVVVR_ 0 0 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7 M0QZM1;P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.3259 2 597.320991 1192.62743 80353.3 0.74337 0.00044403 0.27515 0.00016435 1.0185 0.00060838 597.3211725528 602.325332489134 110.67 0.44731 110.67 110.43 110.88 0 91 22 6 0 0 0 0.0052438 1 63041 56.563 56.563 1 1.0507 0.89475 0 2940800 1246000 1694800 10082 1599;1354 3815 3919 15820 15820 EVFTSSSSSSSR 12 0 1 Unmodified _EVFTSSSSSSSR_ 0 0 0 CON__P08779;P08779;Q16195 CON__P08779 CON__P08779 KRT16;keratin Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.7899 2 630.788763 1259.56297 NaN NaN NaN -0.53662 -0.00033849 NaN NaN NaN NaN 21.599 0.28044 21.599 21.482 21.762 0 0 0 0 3.8271E-13 1 7886 121.83 93.612 1 NaN NaN 0 4439100 4439100 0 + 10083 1159 3816 3920 15821 15821 EVGEHLVSIK 10 1 0 Unmodified _EVGEHLVSIK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.8177 2 555.811313 1109.60807 83407.81 0.79472 0.00044172 -1.1328 -0.00062965 -0.33813 -0.00018794 555.811009532334 559.817403011261 43.682 0.21046 43.682 43.553 43.764 -3.8147E-06 40 15 4 0 0 0 0.022046 1 23731 46.001 27.562 1 1.5616 1.611 0 9649700 3357400 6292300 10084 1402 3817 3921 15822 15822 EVGETLLYYGCR 12 0 1 Unmodified _EVGETLLYYGCR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3541 2 730.347934 1458.68131 75176.07 0.83921 0.00061291 0.39758 0.00029037 1.2368 0.00090329 730.849234286452 735.352980609826 85.195 0.53011 85.195 84.95 85.48 0 103 42 4 0 0 0 0.00090687 1 51100 64.04 54.087 1 1.0217 1.0664 0 13284000 7306200 5978300 10085 719 3818 3922 15823 15823 EVGETLLYYGCR 12 0 1 Unmodified _EVGETLLYYGCR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3541 2 730.347934 1458.68131 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.135 1 84.135 83.635 84.635 0 0 0 0 0.0066799 1 51626 61.65 45.426 1 10086 719 3818 3922 15824 15824 EVGSIIGK 8 1 0 Unmodified _EVGSIIGK_ 0 0 0 Q53SS8;Q15365;F8VTZ0;H3BSP4;C9K0A2;F8WC71;C9IZV9;C9J7A9;C9JSA6;C9J5V4;C9JTY5;C9JZY3;C9J0A4;F6TJN8;Q7Z4Y9;A0A024R320;P57723;H3BRU6;F8VZX2;F8W0G4;F8W1G6;J3QT27;Q5MJP6;E9PFP8;P57721;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2;PCBP4;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 4;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.7446 2 401.737086 801.459619 95188.25 0.013187 5.2976E-06 0.25382 0.00010197 0.26701 0.00010727 401.736857830556 405.744261187753 39.52 1.1321 39.52 39.056 40.189 3.8147E-06 459 92 8 0 0 0 0.017078 2 20377 60.682 14.018 1 2.544 2.8794 0 152180000 42582000 109600000 10087 1263;1760;1759 3819 3923 15825;15826 15825 EVGSIIGK 8 1 0 Unmodified _EVGSIIGK_ 0 0 0 Q53SS8;Q15365;F8VTZ0;H3BSP4;C9K0A2;F8WC71;C9IZV9;C9J7A9;C9JSA6;C9J5V4;C9JTY5;C9JZY3;C9J0A4;F6TJN8;Q7Z4Y9;A0A024R320;P57723;H3BRU6;F8VZX2;F8W0G4;F8W1G6;J3QT27;Q5MJP6;E9PFP8;P57721;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2;PCBP4;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 4;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 405.7443 2 401.737086 801.459619 95458.95 0.083881 3.3698E-05 0.93241 0.00037459 1.0163 0.00040828 401.73689406042 405.744459572791 38.564 0.90103 38.564 38.12 39.021 0 418 76 10 0 0 0 0.019676 1 20172 58.981 21.336 1 2.4439 2.8609 0 304810000 78168000 226640000 10088 1263;1760;1759 3819 3923 15827 15827 EVGSPPLDPTER 12 0 1 Unmodified _EVGSPPLDPTER_ 0 0 0 A0A1B0GV79;A0A1B0GW21;A0A1B0GTE6;A0A0D9SFK7;A0A1B0GUH6;A0A1B0GUA3;Q96EK5 A0A1B0GV79 A0A1B0GV79 KIF1BP;KIAA1279 KIF1-binding protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.8299 2 648.825149 1295.63574 NaN NaN NaN -1.5492 -0.0010052 NaN NaN NaN NaN 51.259 0.46337 51.259 51.067 51.53 0 0 0 0 0.006403 1 29065 60.398 38.548 1 NaN NaN 0 6627000 0 6627000 10089 525 3820 3924 15828 15828 EVIAVSCGPAQCQETIR 17 0 1 Unmodified _EVIAVSCGPAQCQETIR_ 0 0 0 P38117 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 964.4672 2 959.461492 1916.90843 NaN NaN NaN -0.20745 -0.00019904 NaN NaN NaN NaN 68.114 0.7613 68.114 67.735 68.496 0 0 0 0 7.4583E-19 1 39237 123.95 113.9 1 NaN NaN 0 17721000 0 17721000 10090 1551 3821 3925 15829 15829 EVIAVSCGPAQCQETIR 17 0 1 Unmodified _EVIAVSCGPAQCQETIR_ 0 0 0 P38117 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 964.9676 2 959.461492 1916.90843 NaN NaN NaN -0.3999 -0.00038369 NaN NaN NaN NaN 67.075 0.80743 67.075 66.772 67.579 0 0 0 0 6.7491E-09 1 39546 94.122 88.15 1 NaN NaN 0 18894000 0 18894000 10091 1551 3821 3925 15830 15830 EVIAVSCGPAQCQETIR 17 0 1 Unmodified _EVIAVSCGPAQCQETIR_ 0 0 0 P38117 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.4646 2 959.461492 1916.90843 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.928 1 66.928 66.428 67.428 0 0 0 0 0.00016364 1 39602 78.324 67.111 1 10092 1551 3821 3925 15831 15831 EVIDLLK 7 1 0 Unmodified _EVIDLLK_ 0 0 0 A0A024R663;Q86UP2;G8JLP4;Q9Y4F3 A0A024R663 A0A024R663 KTN1;KIAA0430 Kinectin;Meiosis arrest female protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.2553 2 415.255111 828.49567 NaN NaN NaN -0.5439 -0.00022586 NaN NaN NaN NaN 117.13 0.5006 117.13 117 117.5 0 0 0 0 0.045012 1 76763 60.788 0 1 NaN NaN 0 3929700 3929700 0 10093 197 3822 3926 15832 15832 EVIDLLKPDQVEGIQK 16 2 0 Unmodified _EVIDLLKPDQVEGIQK_ 0 0 1 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.9952 3 608.675286 1823.00403 79332.31 0.60348 0.00036733 0.48106 0.00029281 1.0845 0.00066013 608.675306093802 614.354080188182 108.02 0.43667 108.02 107.74 108.18 0 102 24 7 0 0 0 0.034376 1 61954 30.974 20.692 1 0.6108 0.52591 0 6062900 4079500 1983400 10094 197 3823 3927 15833 15833 EVIDLLKPDQVEGIQK 16 2 0 Unmodified _EVIDLLKPDQVEGIQK_ 0 0 1 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.9949 3 608.675286 1823.00403 80171.54 0.52739 0.00032101 0.19505 0.00011872 0.72244 0.00043973 608.675340038642 614.353448245148 107.81 0.46789 107.81 107.67 108.14 0 89 22 8 0 0 0 0.010089 1 60959 36.597 20.198 1 0.54664 0.46546 0 5362800 3812900 1549800 10095 197 3823 3927 15834 15834 EVIELPLTNPELFQR 15 0 1 Unmodified _EVIELPLTNPELFQR_ 0 0 0 V9HW24;A0A087X2I1;P62333;H0YJC0;B4DR91;H0YJS8 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.4966 2 899.490901 1796.96725 64139.28 0.85848 0.00077219 -0.013289 -1.1953E-05 0.84519 0.00076024 899.991825763964 904.494976325904 123.44 0.53719 123.44 123.22 123.75 0 228 39 9 0 0 0 0.00012452 3 80168 80.979 80.979 1 2.2394 2.291 0 33016000 10566000 22450000 10096 454 3824 3928 15835;15836;15837 15837 EVIELPLTNPELFQR 15 0 1 Unmodified _EVIELPLTNPELFQR_ 0 0 0 V9HW24;A0A087X2I1;P62333;H0YJC0;B4DR91;H0YJS8 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.9977 2 899.490901 1796.96725 63240.24 1.0787 0.00097024 -0.022366 -2.0118E-05 1.0563 0.00095012 899.49020000621 904.495179868113 122.97 0.55028 122.97 122.74 123.29 0 232 40 9 0 0 0 1.5138E-07 3 81776 109.6 109.6 1 2.1561 2.4749 0 52201000 16045000 36156000 10097 454 3824 3928 15838;15839;15840 15840 EVINRPFTNESLQPHALGPVK 21 1 1 Unmodified _EVINRPFTNESLQPHALGPVK_ 0 0 1 Q14807;A0A024R632;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 788.765 3 782.757003 2345.24918 69361.83 0.54012 0.00042278 0.20995 0.00016434 0.75007 0.00058712 783.090915035047 788.764898735355 86.752 0.50679 86.752 86.545 87.052 0 141 29 7 0 0 0 2.2366E-05 2 47593 44.047 36.243 1 1.7251 1.423 0 5328500 1904400 3424100 10098 1745 3825 3929 15841;15842 15841 EVINRPFTNESLQPHALGPVK 21 1 1 Unmodified _EVINRPFTNESLQPHALGPVK_ 0 0 1 Q14807;A0A024R632;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.5705 4 587.319571 2345.24918 79043.72 0.5221 0.00030664 0.29574 0.00017369 0.81784 0.00048034 587.570318750699 591.825670414843 86.613 0.58739 86.613 86.395 86.982 0 247 39 10 0 0 0 0.012883 2 46665 20.439 20.439 1 1.4649 1.2398 0 12141000 4837300 7303300 10099 1745 3825 3929 15843;15844 15843 EVINRPFTNESLQPHALGPVK 21 1 1 Unmodified _EVINRPFTNESLQPHALGPVK_ 0 0 1 Q14807;A0A024R632;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.0992 3 782.757003 2345.24918 69154.66 0.60714 0.00047525 -0.41225 -0.00032269 0.19489 0.00015255 783.090836310379 788.764158935347 86.591 0.44519 86.591 86.395 86.84 0 154 29 8 0 0 0 5.5111E-08 1 46674 65.954 65.954 1 1.464 1.2267 0 5463100 2260700 3202300 10100 1745 3825 3929 15845 15845 EVIPVNVPEAQEEMK 15 1 0 Oxidation (M) _EVIPVNVPEAQEEM(ox)K_ EVIPVNVPEAQEEM(1)K EVIPVNVPEAQEEM(40.59)K 0 1 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.4295 2 864.429652 1726.84475 65592.21 0.80822 0.00069865 0.01742 1.5059E-05 0.82564 0.00071371 864.931530684113 868.436629730694 79.878 0.50816 79.878 79.626 80.134 0 216 43 8 0 0 0 0.0019189 1 47342 40.589 40.589 1 3.2954 3.5624 0 35470000 9003600 26467000 10101 1454 3826 3930 15846 15846 1159 EVIPVNVPEAQEEMK 15 1 0 Oxidation (M) _EVIPVNVPEAQEEM(ox)K_ EVIPVNVPEAQEEM(1)K EVIPVNVPEAQEEM(78.69)K 0 1 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.438 2 864.429652 1726.84475 65506.02 0.78188 0.00067588 0.12972 0.00011214 0.91161 0.00078802 864.429356656235 868.436944013581 78.961 0.52659 78.961 78.719 79.246 0 257 44 8 0 0 0 7.8731E-05 1 47813 78.692 74.446 1 3.0889 3.3078 0 37068000 9048700 28020000 10102 1454 3826 3930 15847 15847 1159 EVIQALHPETLISCQSQFK 19 1 0 Unmodified _EVIQALHPETLISCQSQFK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.3889 3 743.384178 2227.1307 71503.26 1.0855 0.00080694 -0.41332 -0.00030726 0.67217 0.00049968 743.718545726753 746.389091197006 97.128 0.40289 97.128 96.828 97.231 0 129 31 7 0 0 0 0.0031682 2 60536 25.888 25.888 1 1.0594 1.1154 0 23840000 7045300 16795000 10103 1937 3827 3931 15848;15849 15849 EVIQALHPETLISCQSQFK 19 1 0 Unmodified _EVIQALHPETLISCQSQFK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.3845 3 743.384178 2227.1307 68460.37 0.89395 0.00066455 -0.36685 -0.00027271 0.5271 0.00039184 743.718340533697 746.389184401556 110.21 0.47102 110.21 110.06 110.53 0 55 25 5 0 0 0 0.020749 1 63612 30.094 30.094 1 0.64839 0.54411 0 2175800 1001200 1174600 10104 1937 3827 3931 15850 15850 EVITAQDTVIK 11 1 0 Unmodified _EVITAQDTVIK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.8444 2 608.84281 1215.67107 77478.8 0.49469 0.00030119 0.17532 0.00010674 0.67001 0.00040793 608.842790167178 612.850038597906 60.797 1.3864 60.797 60.421 61.808 0 651 110 8 0 0 0 1.3053E-08 2 35055 123.35 105.73 1 0.88167 0.99745 0 149320000 76057000 73261000 10105 69 3828 3932 15851;15852 15852 EVITAQDTVIK 11 1 0 Unmodified _EVITAQDTVIK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.85 2 608.84281 1215.67107 76902.6 0.50145 0.0003053 0.11495 6.9987E-05 0.6164 0.00037529 608.842794122069 612.849967612694 59.54 1.4159 59.54 59.284 60.7 -3.8147E-06 630 106 7 0 0 0 2.7317E-05 3 35066 102.07 90.474 1 0.84983 0.98542 0 217370000 114720000 102650000 10106 69 3828 3932 15853;15854;15855 15855 EVITAQDTVIK 11 1 0 Unmodified _EVITAQDTVIK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.85 2 608.84281 1215.67107 77564.03 0.16656 0.00010141 0.20365 0.00012399 0.37021 0.0002254 608.842853682255 612.850010182067 70.103 1.8807 70.103 69.874 71.754 0 718 134 8 0 0 0 0.0016951 3 37191 65.535 49.06 1 1.7989 1.4715 0 34680000 12165000 22515000 10107 69 3828 3932 15856;15857;15858 15856 EVITAQDTVIK 11 1 0 Unmodified _EVITAQDTVIK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.8499 2 608.84281 1215.67107 77919.54 0.10246 6.2383E-05 0.26804 0.0001632 0.3705 0.00022558 608.842894373369 612.850048521554 70.579 1.6785 70.579 70.364 72.043 0 695 122 7 0 0 0 0.0044014 2 36761 58.083 48.302 1 1.7834 1.4796 0 35856000 12794000 23062000 10108 69 3828 3932 15859;15860 15859 EVKEEIDPDEEESAK 15 2 0 Unmodified _EVKEEIDPDEEESAK_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.2787 3 582.935383 1745.78432 79056.16 0.47051 0.00027428 -0.22805 -0.00013294 0.24247 0.00014134 582.935186776898 588.278107661308 34.969 0.66037 34.969 34.659 35.319 0 265 58 7 0 0 0 0.0057075 1 15473 28.032 27.551 1 1.542 1.3255 0 6847500 2414600 4432900 10109 1742 3829 3933 15861 15861 EVKEEIDPDEEESAK 15 2 0 Unmodified _EVKEEIDPDEEESAK_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 874.4036 2 873.899436 1745.78432 66551 0.4434 0.00038749 -0.34781 -0.00030395 0.095586 8.3533E-05 873.898897784822 881.913208542381 35.009 0.49872 35.009 34.736 35.235 0 150 43 6 0 0 0 0.013714 1 15515 44.616 38.512 1 1.5908 1.3724 0 5216000 2073900 3142100 10110 1742 3829 3933 15862 15862 EVLAELEALER 11 0 1 Unmodified _EVLAELEALER_ 0 0 0 H0YML5;B4DW73;Q6IB91;A0A0S2Z430;Q16822;A0A0S2Z4C0 H0YML5 H0YML5 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3501 2 636.345717 1270.67688 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.11 1 107.11 106.61 107.61 0 0 0 0 0.0088364 1 68333 60.518 32.776 1 10111 556 3830 3934 15863 15863 EVLASQLLVLTGQR 14 0 1 Unmodified _EVLASQLLVLTGQR_ 0 0 0 B3KNG8;Q9H2M9 B3KNG8 B3KNG8 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.9545 2 763.948672 1525.88279 NaN NaN NaN 1.3668 0.0010442 NaN NaN NaN NaN 115.54 0.36803 115.54 115.38 115.74 0 0 0 0 4.8558E-11 1 73587 117.98 79.619 1 NaN NaN 0 2420600 0 2420600 10112 913 3831 3935 15864 15864 EVLASQLLVLTGQR 14 0 1 Unmodified _EVLASQLLVLTGQR_ 0 0 0 B3KNG8;Q9H2M9 B3KNG8 B3KNG8 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.9548 2 763.948672 1525.88279 71645.14 0.7636 0.00058335 0.98149 0.00074981 1.7451 0.0013332 763.948669010976 768.953710054272 115.04 0.31601 115.04 114.82 115.14 0 49 20 5 0 0 0 3.2111E-09 1 74933 113.61 99.163 1 2.136 2.1942 0 4948000 2007200 2940800 10113 913 3831 3935 15865 15865 EVLASQLLVLTGQR 14 0 1 Unmodified _EVLASQLLVLTGQR_ 0 0 0 B3KNG8;Q9H2M9 B3KNG8 B3KNG8 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.9539 2 763.948672 1525.88279 83513.28 0.76253 0.00058254 0.2983 0.00022789 1.0608 0.00081042 763.948981583926 769.454500357296 126.93 0.22257 126.93 126.85 127.08 0 21 9 4 0 0 0 0.042198 1 75518 27.681 21.839 1 1.8922 1.6502 0 1467400 358450 1109000 10114 913 3831 3935 15866 15866 EVLCPESQSPNGVR 14 0 1 Unmodified _EVLCPESQSPNGVR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.3816 2 786.377754 1570.74096 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.727 1 42.727 42.227 43.227 0 0 0 0 0.0014735 1 22764 72.652 45.323 1 10115 1740 3832 3936 15867 15867 EVLCPESQSPNGVR 14 0 1 Unmodified _EVLCPESQSPNGVR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.3792 2 786.377754 1570.74096 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.835 1 42.835 42.335 43.335 0 0 0 0 3.5297E-05 1 22840 94.363 74.059 1 10116 1740 3832 3936 15868 15868 EVLCPESQSPNGVR 14 0 1 Unmodified _EVLCPESQSPNGVR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.3817 2 786.377754 1570.74096 70069.27 0.70364 0.00055333 0.19777 0.00015552 0.90141 0.00070885 786.377774056354 791.38201086663 42.172 0.36785 42.172 41.994 42.362 0 94 32 4 0 0 0 0.00014072 1 22674 78.342 71.9 1 0.87197 0.86302 0 12347000 6547300 5799900 10117 1740 3832 3936 15869 15869 EVLCPESQSPNGVR 14 0 1 Unmodified _EVLCPESQSPNGVR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.3823 2 786.377754 1570.74096 68639.15 0.49291 0.00038761 0.044453 3.4957E-05 0.53736 0.00042257 786.378712324376 791.381865710077 49.709 0.50555 49.709 49.459 49.965 0 175 41 6 0 0 0 0.0015049 1 24285 53.211 53.211 1 1.5967 1.3391 0 4137700 1668300 2469400 10118 1740 3832 3936 15870 15870 EVLCPESQSPNGVR 14 0 1 Unmodified _EVLCPESQSPNGVR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 786.8787 2 786.377754 1570.74096 69149.51 0.36612 0.00028791 0.054836 4.3122E-05 0.42096 0.00033103 786.87892568131 791.381808557914 50.138 0.58055 50.138 49.861 50.442 0 166 46 5 0 0 0 0.0016399 3 24019 52.247 43.518 1 2.0889 1.7687 0 3034600 839490 2195100 10119 1740 3832 3936 15871;15872;15873 15872 EVLEGLEYLHK 11 1 0 Unmodified _EVLEGLEYLHK_ 0 0 0 A0A024R2M7;O95747;C9JIG9 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.3646 2 665.356085 1328.69762 NaN NaN NaN -0.039897 -2.6546E-05 NaN NaN NaN NaN 80.276 0.27979 80.276 80.081 80.361 0 0 0 0 0.0017877 1 47707 80.755 51.088 1 NaN NaN 0 12407000 0 12407000 10120 117 3833 3937 15874 15874 EVLLEAQDMAVR 12 0 1 Oxidation (M) _EVLLEAQDM(ox)AVR_ EVLLEAQDM(1)AVR EVLLEAQDM(79.97)AVR 0 1 0 E7ESL0;J3KQY1;Q9NWU5 E7ESL0 E7ESL0 MRPL22 39S ribosomal protein L22, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.3588 2 695.355759 1388.69697 71288.59 0.33886 0.00023563 0.32958 0.00022917 0.66844 0.00046481 695.356046360298 700.360124494276 64.842 0.61121 64.842 64.611 65.223 0 192 53 6 0 0 0 9.9806E-05 3 37353 84.17 73.939 1 1.0943 1.1034 0 15621000 9835500 5786000 10121 1222 3834 3938 15875;15876;15877 15876 931 EVLLPEVGAK 10 1 0 Unmodified _EVLLPEVGAK_ 0 0 0 Q58F09;Q13724;C9J8D4;C9JDQ1 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.8101 2 527.810782 1053.60701 85595.88 0.29607 0.00015627 0.53663 0.00028324 0.8327 0.00043951 527.810323026443 531.81768355245 90.681 0.5828 90.681 90.416 90.999 0 113 31 5 0 0 0 0.04172 1 49416 38.086 22.424 1 0.66888 0.52577 0 2270400 1407300 863060 10122 1720 3835 3939 15878 15878 EVLLQTFLDDTSPGDK 16 1 0 Unmodified _EVLLQTFLDDTSPGDK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 889.9489 2 889.446357 1776.87816 67702.54 0.66874 0.00059481 1.628 0.001448 2.2967 0.0020428 889.447389191319 893.454976679793 117.87 0.55106 117.87 117.61 118.16 0 119 33 6 0 0 0 0.00039919 1 75496 63.727 50.527 1 0.32029 0.31628 0 9324500 6453000 2871400 + 10123 1146 3836 3940 15879 15879 EVLNAVK 7 1 0 Unmodified _EVLNAVK_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 390.7393 2 386.731803 771.449054 98374.95 0.35189 0.00013609 0.17299 6.6899E-05 0.52488 0.00020299 386.731831526911 390.738863110599 29.46 0.34429 29.46 29.305 29.65 0 87 28 4 0 0 0 0.032615 1 14238 65.263 9.2368 1 2.0487 2.0145 0 23637000 8612400 15025000 10124 765 3837 3941 15880 15880 EVLNAVK 7 1 0 Unmodified _EVLNAVK_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 390.7388 2 386.731803 771.449054 NaN NaN NaN 0.055601 2.1503E-05 NaN NaN NaN NaN 29.072 0.251 29.072 28.937 29.188 0 0 0 0 0.051746 1 13911 57.463 9.2899 1 NaN NaN 0 20096000 0 20096000 10125 765 3837 3941 15881 15881 EVLNEEDEVQPNGK 14 1 0 Unmodified _EVLNEEDEVQPNGK_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.3783 2 800.378474 1598.74239 71896.94 1.0783 0.00086308 -0.048192 -3.8572E-05 1.0301 0.00082451 800.879373836898 804.385991912407 41.215 0.41264 41.215 40.993 41.406 0 95 33 5 0 0 0 2.2436E-09 1 21659 117.14 108.62 1 2.1343 2.1988 0 10835000 4725100 6109700 10126 150 3838 3942 15882 15882 EVLNEEDEVQPNGK 14 1 0 Unmodified _EVLNEEDEVQPNGK_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.3787 2 800.378474 1598.74239 69656.57 0.77129 0.00061732 -0.067161 -5.3754E-05 0.70413 0.00056357 800.378037190397 804.38608360965 40.415 0.40644 40.415 40.225 40.632 0 114 34 6 0 0 0 2.7509E-09 2 21520 133.89 133.89 1 1.5839 1.586 0 15651000 8428700 7222600 10127 150 3838 3942 15883;15884 15883 EVLPSTR 7 0 1 Unmodified _EVLPSTR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.2267 2 401.226885 800.439217 NaN NaN NaN 1.2079 0.00048464 NaN NaN NaN NaN 27.369 0.2998 27.369 27.205 27.505 0 0 0 0 0.029153 1 12658 87.284 6.7285 1 NaN NaN 0 13810000 13810000 0 10128 618 3839 3943 15885 15885 EVLQALEELAVNYDQK 16 1 0 Unmodified _EVLQALEELAVNYDQK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;M1V490;M1VPF9;M1V481;M1VPF7;M1VRN0;M1VKI9;M1VE89;Q57Z91;A0A0G2JMZ6;A1L179;J3KNA1;B7Z2M7;B2RCP3;O60282;Q12840 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020630)_K15;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-RET(NM_020975)_K16;R12;KIF5C;KIF5A Kinesin-like protein;Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 935.4793 2 931.480731 1860.94691 63965.75 0.56085 0.00052242 -0.59495 -0.00055418 -0.034094 -3.1758E-05 931.981785826321 935.988881485156 124.99 0.38269 124.99 124.72 125.11 0 84 25 6 0 0 0 0.00064973 2 81282 48.568 48.568 1 1.6942 1.7219 0 6424300 2161000 4263300 10129 1186 3840 3944 15886;15887 15887 EVLQALEELAVNYDQK 16 1 0 Unmodified _EVLQALEELAVNYDQK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;M1V490;M1VPF9;M1V481;M1VPF7;M1VRN0;M1VKI9;M1VE89;Q57Z91;A0A0G2JMZ6;A1L179;J3KNA1;B7Z2M7;B2RCP3;O60282;Q12840 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020630)_K15;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-RET(NM_020975)_K16;R12;KIF5C;KIF5A Kinesin-like protein;Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 935.488 2 931.480731 1860.94691 NaN NaN NaN -0.50182 -0.00046743 NaN NaN NaN NaN 124.53 0.32278 124.53 124.42 124.74 0 0 0 0 2.4872E-06 3 82846 85.271 70.918 1 NaN NaN 0 2789100 0 2789100 10130 1186 3840 3944 15888;15889;15890 15889 EVLSLLQEK 9 1 0 Unmodified _EVLSLLQEK_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;H0Y327 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.8171 2 529.808239 1057.60193 85927.09 0.86084 0.00045608 0.030533 1.6177E-05 0.89137 0.00047226 529.808015056959 533.815306948898 84.025 0.38777 84.025 83.883 84.271 0 89 30 4 0 0 0 0.0010561 1 50320 90.601 50.503 1 1.5765 1.6566 0 15317000 3278500 12038000 10131 418 3841 3945 15891 15891 EVLSLLQEK 9 1 0 Unmodified _EVLSLLQEK_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;H0Y327 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.8164 2 529.808239 1057.60193 87336.34 0.42222 0.0002237 0.51058 0.00027051 0.9328 0.00049421 529.808119139556 533.815616743625 82.97 0.45277 82.97 82.817 83.27 -7.6294E-06 93 34 4 0 0 0 0.0043049 1 50781 69.598 33.029 1 1.7242 1.785 0 9778900 3817600 5961300 10132 418 3841 3945 15892 15892 EVLSMDDEIQK 11 1 0 Oxidation (M) _EVLSM(ox)DDEIQK_ EVLSM(1)DDEIQK EVLSM(70.91)DDEIQK 0 1 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.8174 2 661.81085 1321.60715 NaN NaN NaN -0.62297 -0.00041229 NaN NaN NaN NaN 39.175 0.44157 39.175 38.908 39.35 3.8147E-06 0 0 0 0.00087854 1 20732 70.908 41.822 1 NaN NaN 0 12430000 0 12430000 10133 1688 3842 3946 15893 15893 1507 EVLVVNSQGEISR 13 0 1 Unmodified _EVLVVNSQGEISR_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.3856 2 715.385905 1428.75726 73479.11 0.57238 0.00040947 -0.43635 -0.00031216 0.13603 9.7311E-05 715.385543309239 720.38955137125 62.533 0.49869 62.533 62.327 62.826 0 182 46 6 0 0 0 0.00032476 1 36766 64.439 29.718 1 0.51156 0.55395 0 27376000 16917000 10459000 10134 1224 3843 3947 15894 15894 EVLVVNSQGEISR 13 0 1 Unmodified _EVLVVNSQGEISR_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.3902 2 715.385905 1428.75726 73945.79 0.7054 0.00050463 -0.54921 -0.0003929 0.15619 0.00011173 715.384995439974 720.389615528052 73.233 0.57712 73.233 72.963 73.54 0 167 40 7 0 0 0 0.00021605 1 38736 69.721 35.854 1 1.6797 1.409 0 4153600 1457800 2695800 10135 1224 3843 3947 15895 15895 EVLVVNSQGEISR 13 0 1 Unmodified _EVLVVNSQGEISR_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.3905 2 715.385905 1428.75726 72875.35 0.62165 0.00044472 -0.4821 -0.00034489 0.13954 9.9828E-05 715.385399668637 720.389651524571 73.748 0.62403 73.748 73.41 74.034 0 185 43 7 0 0 0 0.0025719 1 38265 53.211 24.253 1 1.6255 1.4365 0 3683900 1460900 2223000 10136 1224 3843 3947 15896 15896 EVMFTEEDVK 10 1 0 Oxidation (M) _EVM(ox)FTEEDVK_ EVM(1)FTEEDVK EVM(62.82)FTEEDVK 0 1 0 B4DKZ2;B4DG22;B7ZB17;P51812;B1AXG1;B7Z2K7;F2Z2J1;Q15349;D6RHW7;E9PMM7;D6R910;B7Z3B5;E9PGT3;Q15418 B4DKZ2;E9PGT3 B4DKZ2 RPS6KA3;RPS6KA2;RPS6KA1 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase alpha-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.789 2 621.781561 1241.54857 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.333 1 50.333 49.833 50.833 0 0 0 0 0.0027407 1 27776 62.823 31.537 1 10137 971;1235 3844 3948 15897 15897 779 EVMFTEEDVK 10 1 0 Oxidation (M) _EVM(ox)FTEEDVK_ EVM(1)FTEEDVK EVM(58.43)FTEEDVK 0 1 0 B4DKZ2;B4DG22;B7ZB17;P51812;B1AXG1;B7Z2K7;F2Z2J1;Q15349;D6RHW7;E9PMM7;D6R910;B7Z3B5;E9PGT3;Q15418 B4DKZ2;E9PGT3 B4DKZ2 RPS6KA3;RPS6KA2;RPS6KA1 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase alpha-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.7884 2 621.781561 1241.54857 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.46 1 50.46 49.96 50.96 0 0 0 0 0.0042604 1 27854 58.433 35.057 1 10138 971;1235 3844 3948 15898 15898 779 EVMLQNGETPK 11 1 0 Oxidation (M) _EVM(ox)LQNGETPK_ EVM(1)LQNGETPK EVM(94.69)LQNGETPK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3162 2 631.308277 1260.602 77077.75 0.94442 0.00059622 0.71294 0.00045009 1.6574 0.0010463 631.307901309264 635.315793168258 28.682 0.47812 28.682 28.525 29.003 1.9073E-06 65 25 6 0 0 0 7.5769E-05 2 13602 94.692 78.152 1 0.97547 0.99032 0 18124000 9520100 8603900 10139 515 3845 3949 15899;15900 15900 371 EVMSLHEASR 10 0 1 Oxidation (M) _EVM(ox)SLHEASR_ EVM(1)SLHEASR EVM(52.28)SLHEASR 0 1 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.7817 2 587.779687 1173.54482 79898.9 0.48618 0.00028577 -2.4283 -0.0014273 -1.9421 -0.0011415 588.281246414498 592.781935823752 17.206 0.2901 17.206 17.081 17.371 -1.9073E-06 16 7 4 0 0 0 0.0054402 1 4429 52.278 34.893 1 4.0253 4.0563 0 7794000 855000 6939000 10140 397;1622 3846 3950 15901 15901 287 EVNEGIQALSNSEEEK 16 1 0 Unmodified _EVNEGIQALSNSEEEK_ 0 0 0 B3KNP0;D3DQS4;Q8N3X1 B3KNP0 B3KNP0 FNBP4 Formin-binding protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.9265 2 888.418327 1774.8221 NaN NaN NaN 0.62214 0.00055272 NaN NaN NaN NaN 57.191 0.24836 57.191 57.04 57.289 0 0 0 0 0.00027589 1 33041 68.44 59.252 1 NaN NaN 0 2640800 0 2640800 10141 917 3847 3951 15902 15902 EVNEGIQALSNSEEEK 16 1 0 Unmodified _EVNEGIQALSNSEEEK_ 0 0 0 B3KNP0;D3DQS4;Q8N3X1 B3KNP0 B3KNP0 FNBP4 Formin-binding protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.4182 2 888.418327 1774.8221 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.214 1 57.214 56.714 57.714 3.8147E-06 0 0 0 0.0077327 1 33082 48.568 37.958 1 10142 917 3847 3951 15903 15903 EVNEQTHFASMPR 13 0 1 Oxidation (M) _EVNEQTHFASM(ox)PR_ EVNEQTHFASM(1)PR EVNEQTHFASM(65.18)PR 0 1 0 Q6NUN2;A3F769;O15226;A3F768;A2I828;A1Z1A7;A2I830 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.3611 2 781.356822 1560.69909 67514.09 0.28833 0.00022529 -0.29859 -0.00023331 -0.010259 -8.0162E-06 781.355616322784 786.361318007484 23.93 0.4266 23.93 23.701 24.127 1.9073E-06 52 16 6 0 0 0 0.00014996 1 9639 65.179 50.207 1 0.78066 0.78915 0 9506200 5018300 4487900 10143 655 3848 3952 15904 15904 512 EVNEQTHFASMPR 13 0 1 Oxidation (M) _EVNEQTHFASM(ox)PR_ EVNEQTHFASM(1)PR EVNEQTHFASM(46.48)PR 0 1 0 Q6NUN2;A3F769;O15226;A3F768;A2I828;A1Z1A7;A2I830 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.5747 3 521.240307 1560.69909 84153.11 0.027331 1.4246E-05 -0.21522 -0.00011218 -0.18789 -9.7937E-05 521.239913945541 524.576659159496 23.882 0.39893 23.882 23.673 24.072 1.9073E-06 60 15 6 0 0 0 0.001567 1 9770 46.481 33.344 1 0.88406 0.87371 0 12602000 7427200 5174700 10144 655 3848 3952 15905 15905 512 EVNFSVDQNTSSENK 15 1 0 Unmodified _EVNFSVDQNTSSENK_ 0 0 0 Q8NG31;E9PPJ1;Q05C46 Q8NG31;Q05C46 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.8853 2 849.384288 1696.75402 68062.66 0.49163 0.00041758 0.038549 3.2743E-05 0.53017 0.00045032 849.384238668711 853.391749807926 46.948 0.42191 46.948 46.716 47.138 0 115 40 5 0 0 0 0.00022319 2 25322 68.676 68.676 1 0.68774 0.68476 0 19008000 10836000 8172400 10145 1928;1685 3849 3953 15906;15907 15906 EVNFSVDQNTSSENK 15 1 0 Unmodified _EVNFSVDQNTSSENK_ 0 0 0 Q8NG31;E9PPJ1;Q05C46 Q8NG31;Q05C46 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.8859 2 849.384288 1696.75402 68476.86 0.49562 0.00042097 -0.89453 -0.0007598 -0.39892 -0.00033883 849.384027409271 853.391563624111 45.978 0.60321 45.978 45.637 46.241 0 172 50 5 0 0 0 0.00068847 1 25229 52.132 52.132 1 0.79175 0.79991 0 28598000 14022000 14576000 10146 1928;1685 3849 3953 15908 15908 EVNFSVDQNTSSENK 15 1 0 Unmodified _EVNFSVDQNTSSENK_ 0 0 0 Q8NG31;E9PPJ1;Q05C46 Q8NG31;Q05C46 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.3843 2 849.384288 1696.75402 65105.96 0.73363 0.00062313 -0.26671 -0.00022654 0.46692 0.0003966 849.384558847162 853.391422582157 54.171 0.59911 54.171 53.842 54.441 0 234 48 7 0 0 0 0.026782 1 26931 28.624 28.624 1 1.0554 0.83829 0 6529600 3302200 3227400 10147 1928;1685 3849 3953 15909 15909 EVNFSVDQNTSSENK 15 1 0 Unmodified _EVNFSVDQNTSSENK_ 0 0 0 Q8NG31;E9PPJ1;Q05C46 Q8NG31;Q05C46 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 853.392 2 849.384288 1696.75402 66418.65 0.51325 0.00043595 -0.19093 -0.00016217 0.32232 0.00027378 849.384462734247 853.391363503162 54.735 0.97786 54.735 54.056 55.034 -3.8147E-06 282 75 7 0 0 0 1.1682E-07 2 26725 110.31 110.31 1 1.1096 0.90852 0 5440100 2551200 2888900 10148 1928;1685 3849 3953 15910;15911 15911 EVNFTSELR 9 0 1 Unmodified _EVNFTSELR_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.7816 2 547.77747 1093.54039 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.966 1 78.966 78.466 79.466 -7.6294E-06 0 0 0 0.040745 1 42478 49.554 30.824 1 10149 1837 3850 3954 15912 15912 EVNFTSELR 9 0 1 Unmodified _EVNFTSELR_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 552.7827 2 547.77747 1093.54039 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.244 1 79.244 78.744 79.744 7.6294E-06 0 0 0 0.04806 1 41818 47.198 25.516 1 10150 1837 3850 3954 15913 15913 EVNFTSELRK 10 1 1 Unmodified _EVNFTSELRK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.8249 2 611.824952 1221.63535 75523.51 0.63158 0.00038642 -0.86807 -0.00053111 -0.23649 -0.00014469 612.326373793042 620.835369173666 48.531 0.51328 48.531 48.334 48.847 0 145 37 7 0 0 0 0.0011895 1 26515 98.033 73.11 1 0.86551 1.0348 0 54248000 22258000 31991000 10151 1837 3851 3955 15914 15914 EVNFTSELRK 10 1 1 Unmodified _EVNFTSELRK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.8369 2 611.824952 1221.63535 77419.35 0.37233 0.0002278 -0.11153 -6.8236E-05 0.2608 0.00015956 611.82484904864 620.835807857742 47.03 0.47852 47.03 46.79 47.269 0 201 41 7 0 0 0 0.004808 1 26111 67.113 39.809 1 0.73773 0.86729 0 67854000 40508000 27346000 10152 1837 3851 3955 15915 15915 EVNFTSELRK 10 1 1 Unmodified _EVNFTSELRK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.8251 2 611.824952 1221.63535 76966.14 0.48394 0.00029609 -0.16487 -0.00010087 0.31907 0.00019521 611.824806620933 620.835965604031 55.864 0.74147 55.864 55.577 56.319 0 229 48 8 0 0 0 0.00061089 2 28054 88.681 46.572 1 1.22 1.0574 0 16232000 6959000 9273300 10153 1837 3851 3955 15916;15917 15917 EVNFTSELRK 10 1 1 Unmodified _EVNFTSELRK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.8364 2 611.824952 1221.63535 77433.3 0.46833 0.00028654 -0.10185 -6.2316E-05 0.36648 0.00022422 611.824789032117 620.835997117096 56.146 0.73396 56.146 55.823 56.557 0 249 50 8 0 0 0 0.012952 1 27553 57.032 32.11 1 1.1884 1.0066 0 14303000 6348200 7954600 10154 1837 3851 3955 15918 15918 EVNSQEEEEEELLRK 15 1 1 Unmodified _EVNSQEEEEEELLRK_ 0 0 1 A0A024R7R0;Q96RL1;D6RC40;D6RCQ3 A0A024R7R0 A0A024R7R0 RAP80;UIMC1 BRCA1-A complex subunit RAP80 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.9736 3 620.965565 1859.87487 80784.75 0.41836 0.00025978 0.025853 1.6054E-05 0.44421 0.00027584 621.300223329349 626.972923550817 60.896 0.27188 60.896 60.725 60.997 0 60 24 4 0 0 0 0.061966 1 30490 11.055 5.7377 1 1.299 1.1107 0 1517600 499930 1017600 10155 233 3852 3956 15919 15919 EVPAVPETLK 10 1 0 Unmodified _EVPAVPETLK_ 0 0 0 A0A024R814;P18124 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.8085 2 541.808239 1081.60193 82489.18 0.4771 0.0002585 0.2362 0.00012798 0.7133 0.00038647 541.808284002853 545.815318246362 67.066 1.7355 67.066 66.359 68.095 0 910 140 10 0 0 0 0.0014554 4 38850 73.573 39.484 1 0.97577 1.15 0 329250000 173610000 155640000 10156 240 3853 3957 15920;15921;15922;15923 15922 EVPAVPETLK 10 1 0 Unmodified _EVPAVPETLK_ 0 0 0 A0A024R814;P18124 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.8084 2 541.808239 1081.60193 82417.98 0.358 0.00019397 0.30503 0.00016527 0.66303 0.00035924 541.808287540219 545.815405464976 66.137 1.6357 66.137 65.289 66.925 0 931 137 10 0 0 0 0.00085026 4 39076 80.219 46.13 1 1.0074 1.1864 0 497820000 251350000 246470000 10157 240 3853 3957 15924;15925;15926;15927 15926 EVPAVPETLK 10 1 0 Unmodified _EVPAVPETLK_ 0 0 0 A0A024R814;P18124 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.8158 2 541.808239 1081.60193 82120.38 0.50252 0.00027227 0.23782 0.00012885 0.74035 0.00040113 541.80829413535 545.815405673654 77.102 1.6843 77.102 76.692 78.376 7.6294E-06 435 110 8 0 0 0 0.033417 1 40325 41.427 14.734 1 0.88813 0.75163 0 59728000 31273000 28455000 10158 240 3853 3957 15928 15928 EVPAVPETLKK 11 2 0 Unmodified _EVPAVPETLKK_ 0 0 1 A0A024R814;P18124 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.8557 2 605.855721 1209.69689 77454.88 0.56851 0.00034443 0.0061518 3.7271E-06 0.57466 0.00034816 605.855546914985 613.869929120626 46.192 0.70562 46.192 45.845 46.551 0 261 61 6 0 0 0 0.00056349 1 24893 96.665 71.889 1 1.0235 1.208 0 92934000 46916000 46018000 10159 240 3854 3958 15929 15929 EVPAVPETLKK 11 2 0 Unmodified _EVPAVPETLKK_ 0 0 1 A0A024R814;P18124 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.8705 2 605.855721 1209.69689 77862.17 0.58561 0.0003548 0.12128 7.3479E-05 0.70689 0.00042827 605.855670303949 613.869987296004 44.864 0.52053 44.864 44.653 45.173 0 185 40 6 0 0 0 0.00063083 1 24525 83.309 56.924 1 1.0071 1.1691 0 97178000 46651000 50526000 10160 240 3854 3958 15930 15930 EVPAVPETLKK 11 2 0 Unmodified _EVPAVPETLKK_ 0 0 1 A0A024R814;P18124 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.87 2 605.855721 1209.69689 77832.92 0.3827 0.00023186 -0.11984 -7.2609E-05 0.26285 0.00015925 605.855511531087 613.869792159927 53.065 0.76576 53.065 52.825 53.591 -3.8147E-06 250 58 7 0 0 0 0.038965 1 26299 42.336 31.506 1 0.88842 0.75985 0 11006000 5607400 5398900 10161 240 3854 3958 15931 15931 EVPAVPETLKK 11 2 0 Unmodified _EVPAVPETLKK_ 0 0 1 A0A024R814;P18124 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.856 2 605.855721 1209.69689 77718.73 0.36267 0.00021973 0.098427 5.9632E-05 0.4611 0.00027936 605.855633260288 613.869955562159 53.362 0.73688 53.362 53.131 53.868 0 223 52 7 0 0 0 0.055086 1 25948 44.309 33.48 1 0.91635 0.77376 0 9796600 5321100 4475500 10162 240 3854 3958 15932 15932 EVPDYLDHIK 10 1 0 Unmodified _EVPDYLDHIK_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.8141 2 614.814053 1227.61355 NaN NaN NaN -0.1428 -8.7796E-05 NaN NaN NaN NaN 66.143 0.33583 66.143 65.978 66.313 0 0 0 0 0.014048 1 39027 59.153 33.416 1 NaN NaN 0 8688700 8688700 0 10163 162 3855 3959 15933 15933 EVPEHITEEELK 12 1 0 Unmodified _EVPEHITEEELK_ 0 0 0 Q7L0Y3;C9JVB6 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.8726 2 726.864471 1451.71439 NaN NaN NaN -0.082136 -5.9702E-05 NaN NaN NaN NaN 47.502 0.46721 47.502 47.248 47.715 3.8147E-06 0 0 0 0.002262 2 25672 68.657 45.337 1 NaN NaN 0 15327000 0 15327000 10164 1871 3856 3960 15934;15935 15934 EVPEYLNHVSK 11 1 0 Unmodified _EVPEYLNHVSK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.838 2 657.838059 1313.66157 75727.73 0.79674 0.00052412 0.8297 0.00054581 1.6264 0.0010699 657.83807336574 661.845455836871 42.24 0.5389 42.24 41.984 42.523 3.8147E-06 194 40 7 0 0 0 0.0040736 1 22386 68.893 54.227 1 0.58972 0.63704 0 42369000 28211000 14159000 10165 1718 3857 3961 15936 15936 EVPEYLNHVSK 11 1 0 Unmodified _EVPEYLNHVSK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.8372 2 657.838059 1313.66157 75462.2 0.9757 0.00064185 0.94467 0.00062144 1.9204 0.0012633 657.83820610927 661.846426677811 41.435 0.4451 41.435 41.187 41.633 0 138 37 5 0 0 0 0.018795 2 22138 53.597 35.594 1 0.58335 0.5863 0 27259000 16097000 11163000 10166 1718 3857 3961 15937;15938 15937 EVPEYLNHVSK 11 1 0 Unmodified _EVPEYLNHVSK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.3479 2 657.838059 1313.66157 76295.39 0.51186 0.00033672 1.3214 0.00086925 1.8332 0.001206 657.838129627337 661.845305680038 49.048 0.77265 49.048 48.799 49.572 0 263 63 8 0 0 0 0.053785 1 23886 39.917 20.646 1 1.0106 0.79586 0 5712900 2850200 2862700 10167 1718 3857 3961 15939 15939 EVPIPEHIDIYHLTR 15 0 1 Unmodified _EVPIPEHIDIYHLTR_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63;C9JHK9;C9JZV3 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.6647 3 611.328221 1830.96283 78527.59 0.55054 0.00033656 0.17157 0.00010488 0.72211 0.00044145 611.662657427864 614.664505161222 109.13 0.36078 109.13 108.99 109.35 0 81 18 7 0 0 0 0.00020627 1 62814 52.522 52.522 1 1.2545 1.0495 0 3200800 1241400 1959400 10168 455 3858 3962 15940 15940 EVPIPEHIDIYHLTR 15 0 1 Unmodified _EVPIPEHIDIYHLTR_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63;C9JHK9;C9JZV3 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 458.7476 4 458.747985 1830.96283 89874.71 0.42405 0.00019453 -0.26971 -0.00012373 0.15434 7.0805E-05 458.74781245374 461.500575831453 109.13 0.38378 109.13 108.97 109.35 7.6294E-06 79 19 6 0 0 0 0.036625 1 62823 19.893 16.173 1 1.1997 1.0345 0 2651500 1009000 1642500 10169 455 3858 3962 15941 15941 EVPIPEHIDIYHLTR 15 0 1 Unmodified _EVPIPEHIDIYHLTR_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63;C9JHK9;C9JZV3 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.6649 3 611.328221 1830.96283 79667.84 0.54386 0.00033248 0.63259 0.00038672 1.1765 0.0007192 611.662699154214 614.998659227904 108.95 0.33842 108.95 108.79 109.12 7.6294E-06 48 15 5 0 0 0 0.0063752 2 61773 30.961 30.961 1 0.76936 0.67595 0 4153200 2119200 2034000 10170 455 3858 3962 15942;15943 15942 EVPLPAGIYNLDDLK 15 1 0 Unmodified _EVPLPAGIYNLDDLK_ 0 0 0 A8MX75;P18074;K7EIT8 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.4482 2 828.945795 1655.87704 66600.35 0.66875 0.00055436 0.20447 0.00016949 0.87322 0.00072385 829.448041863382 832.952734237536 118.44 0.48726 118.44 118.28 118.77 0 115 29 6 0 0 0 0.004564 1 77841 38.875 38.875 1 0.69202 0.70545 0 12184000 6955900 5227700 10171 799 3859 3963 15944 15944 EVPLVFPK 8 1 0 Unmodified _EVPLVFPK_ 0 0 0 Q9Y305;Q9H2R8 Q9Y305 Q9Y305 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.7853 2 464.778754 927.542954 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.002 1 88.002 87.502 88.502 0 0 0 0 0.053457 1 54290 53.554 6.4873 1 10172 2130 3860 3964 15945 15945 EVPTQFLDRDEEEEDADFLK 20 1 1 Unmodified _EVPTQFLDRDEEEEDADFLK_ 0 0 1 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.3732 3 809.03957 2424.09688 NaN NaN NaN -0.17461 -0.00014127 NaN NaN NaN NaN 101.36 0.61422 101.36 101.01 101.62 7.6294E-06 0 0 0 0.0005291 2 62155 51.348 28.175 1 NaN NaN 0 8768500 8768500 0 10173 1708 3861 3965 15946;15947 15947 EVPTQFLDRDEEEEDADFLK 20 1 1 Unmodified _EVPTQFLDRDEEEEDADFLK_ 0 0 1 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.3724 3 809.03957 2424.09688 67974.2 0.67513 0.0005462 -0.10399 -8.413E-05 0.57114 0.00046207 809.708143362431 815.047183094988 100.46 0.66283 100.46 100.26 100.92 -7.6294E-06 269 53 8 0 0 0 0.00652 1 63042 23.726 20.583 1 0.87058 1.0121 0 39746000 24435000 15311000 10174 1708 3861 3965 15948 15948 EVPTQFLDRDEEEEDADFLK 20 1 1 Unmodified _EVPTQFLDRDEEEEDADFLK_ 0 0 1 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.3748 3 809.03957 2424.09688 67068.42 0.94675 0.00076595 -0.0897 -7.2571E-05 0.85705 0.00069338 809.373702983258 815.047043109478 113.01 0.7507 113.01 112.81 113.56 0 144 35 8 0 0 0 0.009456 2 65715 23.172 23.172 1 0.92868 0.7759 0 6459800 3163400 3296400 10175 1708 3861 3965 15949;15950 15949 EVQDGIAPR 9 0 1 Unmodified _EVQDGIAPR_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.764 2 492.759081 983.503609 88362.81 0.43984 0.00021673 0.2395 0.00011802 0.67934 0.00033475 492.758526484408 497.763139391854 27.297 0.50527 27.297 26.961 27.467 1.9073E-06 68 25 5 0 0 0 0.00049028 1 12552 98.523 55.457 1 3.3876 3.4951 0 10244000 3129800 7114700 10176 613 3862 3966 15951 15951 EVQGFESATFLGYFK 15 1 0 Unmodified _EVQGFESATFLGYFK_ 0 0 0 Q5T0I0;B7Z4U6;B7Z992;A0A0A0MS51;B7Z9A0;B7Z6N2;A0A0A0MT01;CON__Q3SX14;P06396;Q5T0I1;A0A0U1RQL8 Q5T0I0 Q5T0I0 GSN Gelsolin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.9237 2 861.92232 1721.83009 NaN NaN NaN -0.078327 -6.7512E-05 NaN NaN NaN NaN 120.37 0.47124 120.37 120.12 120.59 -7.6294E-06 0 0 0 0.035117 1 77511 39.625 25.962 1 NaN NaN 0 5260900 5260900 0 + 10177 474 3863 3967 15952 15952 EVQGFESATFLGYFK 15 1 0 Unmodified _EVQGFESATFLGYFK_ 0 0 0 Q5T0I0;B7Z4U6;B7Z992;A0A0A0MS51;B7Z9A0;B7Z6N2;A0A0A0MT01;CON__Q3SX14;P06396;Q5T0I1;A0A0U1RQL8 Q5T0I0 Q5T0I0 GSN Gelsolin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 862.4255 2 861.92232 1721.83009 NaN NaN NaN 0.18789 0.00016194 NaN NaN NaN NaN 132.65 0.36008 132.65 132.43 132.79 0 0 0 0 0.00052375 1 80669 71.085 53.276 1 NaN NaN 0 1693000 1693000 0 + 10178 474 3863 3967 15953 15953 EVQLAQIFEPLSR 13 0 1 Unmodified _EVQLAQIFEPLSR_ 0 0 0 G1UI16;Q29RF7;H0Y9L6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.4232 2 765.419748 1528.82494 NaN NaN NaN -0.29135 -0.00022301 NaN NaN NaN NaN 120.88 0.37788 120.88 120.71 121.09 -7.6294E-06 0 0 0 1.0293E-05 2 77990 98.156 74.837 1 NaN NaN 0 6864900 0 6864900 10179 1270 3864 3968 15954;15955 15955 EVQLAQIFEPLSR 13 0 1 Unmodified _EVQLAQIFEPLSR_ 0 0 0 G1UI16;Q29RF7;H0Y9L6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.4246 2 765.419748 1528.82494 70050.02 0.91694 0.00070185 -0.35046 -0.00026825 0.56649 0.0004336 765.419747210534 770.423758726963 133.29 0.80853 133.29 133.1 133.91 0 116 34 7 0 0 0 0.048651 1 81101 29.544 29.544 1 0.51618 0.43536 0 4729300 3140900 1588400 10180 1270 3864 3968 15956 15956 EVQLAQIFEPLSR 13 0 1 Unmodified _EVQLAQIFEPLSR_ 0 0 0 G1UI16;Q29RF7;H0Y9L6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 770.9276 2 765.419748 1528.82494 71231.61 1.2512 0.00095766 -0.17458 -0.00013362 1.0766 0.00082404 765.41984237145 770.925662599335 133 0.6562 133 132.85 133.5 0 100 27 7 0 0 0 0.00010743 1 80042 91.961 91.961 1 0.59835 0.49641 0 5095200 3087000 2008200 10181 1270 3864 3968 15957 15957 EVQQHALIHQESK 13 1 0 Unmodified _EVQQHALIHQESK_ 0 0 0 Q8WWU0;Q8WXB7;E9PEP7;A0A024RC04;B7ZKJ5;P17010 Q8WWU0 Q8WWU0 ZFX Zinc finger X-chromosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.9421 3 516.270595 1545.78995 83943.73 -0.074185 -3.83E-05 -0.0044623 -2.3037E-06 -0.078648 -4.0603E-05 516.270392775223 518.942219405938 19.287 0.32315 19.287 19.155 19.478 -1.9073E-06 75 15 8 0 0 0 0.045336 1 5053 19.244 19.244 1 1.0538 0.85486 0 2724000 1579900 1144100 10182 351 3865 3969 15958 15958 EVQQTLEELR 10 0 1 Unmodified _EVQQTLEELR_ 0 0 0 B3KPM8;Q8N5C6 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.8327 2 622.827692 1243.64083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.395 1 74.395 73.895 74.895 7.6294E-06 0 0 0 0.00325 1 38657 66.435 28.959 1 10183 921 3866 3970 15959 15959 EVQSALSTAAADDSK 15 1 0 Unmodified _EVQSALSTAAADDSK_ 0 0 0 Q9Y232;C9JQG7 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.861 2 746.859917 1491.70528 69739.02 0.6792 0.00050727 0.25706 0.00019199 0.93626 0.00069925 746.8598781571 750.86709535984 40.385 0.5813 40.385 40.212 40.793 0 248 51 8 0 0 0 2.5057E-38 2 21071 164.48 118.32 1 1.2305 1.385 0 120470000 52677000 67793000 10184 2121 3867 3971 15960;15961 15961 EVQSALSTAAADDSK 15 1 0 Unmodified _EVQSALSTAAADDSK_ 0 0 0 Q9Y232;C9JQG7 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3616 2 746.859917 1491.70528 69682.68 0.74892 0.00055934 0.24218 0.00018087 0.9911 0.00074021 746.859785363551 750.867076139561 39.377 0.73763 39.377 39.187 39.925 0 318 63 7 0 0 0 7.1951E-16 2 20823 136.27 94.565 1 1.2559 1.4163 0 62268000 29881000 32387000 10185 2121 3867 3971 15962;15963 15963 EVQSALSTAAADDSK 15 1 0 Unmodified _EVQSALSTAAADDSK_ 0 0 0 Q9Y232;C9JQG7 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.8682 2 746.859917 1491.70528 69948.72 0.53494 0.00039952 0.1106 8.2605E-05 0.64554 0.00048213 746.859859996975 750.867140085247 46.751 1.1664 46.751 46.132 47.299 0 364 82 8 0 0 0 0.00013463 3 22385 80.371 67.017 1 1.4391 1.1188 0 12555000 5199800 7354800 10186 2121 3867 3971 15964;15965;15966 15964 EVQSALSTAAADDSK 15 1 0 Unmodified _EVQSALSTAAADDSK_ 0 0 0 Q9Y232;C9JQG7 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 746.8597 2 746.859917 1491.70528 69653.47 0.19822 0.00014804 0.48219 0.00036013 0.68042 0.00050817 746.86013443226 750.86737459175 47.156 1.2389 47.156 46.456 47.695 0 483 87 8 0 0 0 0.00014965 2 22122 79.466 53.528 1 1.4608 1.1821 0 13397000 4942400 8454500 10187 2121 3867 3971 15967;15968 15967 EVQSPEGMISLR 12 0 1 Oxidation (M) _EVQSPEGM(ox)ISLR_ EVQSPEGM(1)ISLR EVQSPEGM(133.81)ISLR 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.3439 2 681.340109 1360.66566 72381.78 0.45069 0.00030707 0.43349 0.00029536 0.88418 0.00060243 681.340200427758 686.344466817646 59.207 0.52946 59.207 58.962 59.492 0 249 40 9 0 0 0 3.0323E-13 2 33598 133.81 69.991 1 1.3835 1.5765 0 117660000 48254000 69403000 10188 2038 3868 3972 15969;15970 15969 1876 EVQSPEGMISLR 12 0 1 Oxidation (M) _EVQSPEGM(ox)ISLR_ EVQSPEGM(1)ISLR EVQSPEGM(88.06)ISLR 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.8423 2 681.340109 1360.66566 69717.47 0.61048 0.00041594 0.46315 0.00031556 1.0736 0.0007315 681.340268773696 686.344358642418 58.18 0.3552 58.18 57.957 58.312 0 151 27 9 0 0 0 0.00011241 1 33673 88.056 55.838 1 1.2549 1.4363 0 163810000 71495000 92319000 10189 2038 3868 3972 15971 15971 1876 EVQSPEGMISLR 12 0 1 Oxidation (M) _EVQSPEGM(ox)ISLR_ EVQSPEGM(1)ISLR EVQSPEGM(90.83)ISLR 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.3438 2 681.340109 1360.66566 71488.91 0.49296 0.00033587 0.32696 0.00022277 0.81992 0.00055864 681.340086046147 686.345013233203 68.766 0.63602 68.766 68.496 69.132 0 204 47 8 0 0 0 8.9498E-05 2 35951 90.827 58.893 1 1.1031 0.91902 0 10653000 5229700 5422900 10190 2038 3868 3972 15972;15973 15973 1876 EVQSPEGMISLR 12 0 1 Oxidation (M) _EVQSPEGM(ox)ISLR_ EVQSPEGM(1)ISLR EVQSPEGM(84.66)ISLR 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.3405 2 681.340109 1360.66566 70947.59 0.58403 0.00039793 -0.012559 -8.5567E-06 0.57148 0.00038937 681.340116231173 686.344230457059 69.313 0.54584 69.313 69.094 69.64 0 190 36 8 0 0 0 0.00011099 1 35516 84.658 41.146 1 1.0325 0.83774 0 10164000 5186800 4977600 10191 2038 3868 3972 15974 15974 1876 EVQSPEGMISLR 12 0 1 Unmodified _EVQSPEGMISLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.3475 2 673.342652 1344.67075 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.419 1 93.419 92.919 93.919 7.6294E-06 0 0 0 0.0060417 1 51333 62.633 30.698 1 10192 2038 3868 3973 15975 15975 EVQSPEGMISLR 12 0 1 Unmodified _EVQSPEGMISLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.3481 2 673.342652 1344.67075 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.496 1 93.496 92.996 93.996 0 0 0 0 0.00017803 1 51389 86.344 40.216 1 10193 2038 3868 3973 15976 15976 EVSDDEAEEKEDKEEEK 17 3 0 Unmodified _EVSDDEAEEKEDKEEEK_ 0 0 2 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.9731 3 679.958804 2036.85458 73219.36 0.47658 0.00032406 -0.37371 -0.00025411 0.10287 6.9947E-05 679.958097998265 687.972736082491 15.399 0.13188 15.399 15.329 15.461 0 22 4 6 0 0 0 0.0011451 1 2666 42.647 42.381 1 6.2085 5.8147 0 2354100 335810 2018300 10194 1348 3869 3974 15977 15977 EVSDGIIAPGYEEEALTILSK 21 1 0 Unmodified _EVSDGIIAPGYEEEALTILSK_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1122.0858 2 1117.57556 2233.13656 58411.5 0.46351 0.00051801 0.045521 5.0873E-05 0.50903 0.00056888 1118.07633303783 1122.08429247358 126.84 0.41576 126.84 126.66 127.07 0 134 25 7 0 0 0 0.0032569 1 84564 30.483 30.483 1 2.6841 2.7385 0 12049000 3121200 8927900 10195 852 3870 3975 15978 15978 EVSIEDTGVDVDPEK 15 1 0 Unmodified _EVSIEDTGVDVDPEK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.3858 2 816.385965 1630.75738 67731.85 0.51209 0.00041807 -0.008208 -6.7009E-06 0.50388 0.00041136 816.386314740149 820.392608089485 77.95 0.6157 77.95 77.622 78.237 0 264 48 8 0 0 0 3.3671E-10 2 45920 116.54 116.54 1 1.1172 1.2113 0 44788000 22015000 22773000 10196 895 3871 3976 15979;15980 15980 EVSIEDTGVDVDPEK 15 1 0 Unmodified _EVSIEDTGVDVDPEK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.3924 2 816.385965 1630.75738 67795.92 0.56094 0.00045795 -0.013173 -1.0755E-05 0.54777 0.00044719 816.386075741924 820.392938494958 77.077 0.67137 77.077 76.76 77.432 0 265 55 7 0 0 0 5.1571E-06 2 46779 96.64 96.64 1 0.89869 0.99484 0 45715000 21429000 24286000 10197 895 3871 3976 15981;15982 15982 EVSIEDTGVDVDPEK 15 1 0 Unmodified _EVSIEDTGVDVDPEK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.3878 2 816.385965 1630.75738 67464.94 0.83646 0.00068288 -0.060101 -4.9066E-05 0.77636 0.00063381 816.386040949538 820.392849506853 89.215 0.73036 89.215 88.856 89.586 0 268 48 8 0 0 0 0.0002248 2 49147 71.176 71.176 1 1.3199 1.0229 0 13536000 5991700 7544600 10198 895 3871 3976 15983;15984 15984 EVSIEDTGVDVDPEK 15 1 0 Unmodified _EVSIEDTGVDVDPEK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.392 2 816.385965 1630.75738 67886.13 0.43133 0.00035213 0.0093943 7.6694E-06 0.44072 0.0003598 816.386058176903 820.39302482341 89.232 0.71896 89.232 88.888 89.607 7.6294E-06 249 44 8 0 0 0 0.00075657 1 48352 50.675 50.675 1 1.4088 1.1312 0 14435000 5421100 9013400 10199 895 3871 3976 15985 15985 EVSQVDTICECLLEHEEQVLR 21 0 1 Unmodified _EVSQVDTICECLLEHEEQVLR_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 866.4442 3 862.743994 2585.21015 67369.74 0.72269 0.0006235 0.32891 0.00028376 1.0516 0.00090726 863.078997484473 866.414397152047 127.78 0.41782 127.78 127.54 127.95 0 71 15 7 0 0 0 0.012998 1 76979 21.006 21.006 1 1.1604 1.0063 0 2083900 1094300 989690 10200 1070 3872 3977 15986 15986 EVSSSFDHVIK 11 1 0 Unmodified _EVSSSFDHVIK_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.3172 2 624.31696 1246.61937 76712.41 0.60018 0.0003747 0.17717 0.00011061 0.77735 0.00048531 624.317248405111 628.324247469669 47.696 0.64014 47.696 47.363 48.003 0 214 51 6 0 0 0 0.00016523 2 25933 94.309 77.767 1 1.5508 1.7454 0 72677000 27240000 45437000 10201 2152 3873 3978 15987;15988 15988 EVSSSFDHVIK 11 1 0 Unmodified _EVSSSFDHVIK_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3246 2 624.31696 1246.61937 78842.15 0.66348 0.00041422 0.43722 0.00027296 1.1007 0.00068719 624.317723096728 628.324148241636 46.161 0.55835 46.161 45.837 46.395 0 192 41 8 0 0 0 0.00045925 2 25402 76.827 58.387 1 1.7113 1.9181 0 79884000 28525000 51359000 10202 2152 3873 3978 15989;15990 15990 EVSSSFDHVIK 11 1 0 Unmodified _EVSSSFDHVIK_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.3249 2 624.31696 1246.61937 76893.5 0.61772 0.00038565 0.69306 0.00043269 1.3108 0.00081834 624.318359778578 628.32404420837 54.547 0.59704 54.547 54.273 54.87 -3.8147E-06 144 40 6 0 0 0 0.043879 1 27182 35.541 19.879 1 2.026 1.5806 0 3283300 1172300 2111000 10203 2152 3873 3978 15991 15991 EVSTAPAGTDMPAAK 15 1 0 Oxidation (M) _EVSTAPAGTDM(ox)PAAK_ EVSTAPAGTDM(1)PAAK EVSTAPAGTDM(51.25)PAAK 0 1 0 O75530;E9PJK2;H0YEL4 O75530 O75530 EED Polycomb protein EED ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.355 2 731.348131 1460.68171 NaN NaN NaN 0.11733 8.5805E-05 NaN NaN NaN NaN 23.566 0.31465 23.566 23.414 23.728 0 0 0 0 0.0030497 1 9352 51.252 34.581 1 NaN NaN 0 10300000 0 10300000 10204 1407 3874 3979 15992 15992 1084 EVSTAPAGTDMPAAK 15 1 0 Oxidation (M) _EVSTAPAGTDM(ox)PAAK_ EVSTAPAGTDM(1)PAAK EVSTAPAGTDM(61.34)PAAK 0 1 0 O75530;E9PJK2;H0YEL4 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.3474 2 731.348131 1460.68171 71369.48 0.43487 0.00031804 0.029533 2.1599E-05 0.4644 0.00033964 731.348037236189 735.355493227765 23.39 0.36828 23.39 23.202 23.57 0 76 16 6 0 0 0 0.00012487 1 9228 61.344 40.566 1 1.2296 1.2825 0 10996000 4926100 6070000 10205 1407 3874 3979 15993 15993 1084 EVSTYIK 7 1 0 Unmodified _EVSTYIK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;Q53G89;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 420.2282 2 420.229094 838.443634 92214.2 0.175 7.3541E-05 -0.40257 -0.00016917 -0.22757 -9.5633E-05 420.228741542314 424.235994709856 31.895 1.7558 31.895 31.687 33.442 0 712 163 8 0 0 0 0.028931 2 15801 71.141 23.026 1 2.4257 2.8638 0 1032900000 277940000 755000000 10206 1658;1790 3875 3980 15994;15995 15995 EVSTYIK 7 1 0 Unmodified _EVSTYIK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;Q53G89;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 420.2292 2 420.229094 838.443634 92133.1 -0.5392 -0.00022659 0.5536 0.00023264 0.0144 6.0514E-06 420.22932125552 424.236289792606 36.904 1.9869 36.904 36.525 38.512 0 684 163 8 0 0 0 0.044796 1 16119 57.463 9.2899 1 1.6138 1.3565 0 50485000 18947000 31537000 10207 1658;1790 3875 3980 15996 15996 EVTEPLNLNPAK 12 1 0 Unmodified _EVTEPLNLNPAK_ 0 0 0 Q53GF0;Q8NFW8;F5GYM0 Q53GF0 Q53GF0 CMAS N-acylneuraminate cytidylyltransferase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.8586 2 662.858992 1323.70343 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.742 1 72.742 72.242 73.242 0 0 0 0 0.0035734 1 42632 66.435 39.92 1 10208 1788 3876 3981 15997 15997 EVTEPLNLNPAK 12 1 0 Unmodified _EVTEPLNLNPAK_ 0 0 0 Q53GF0;Q8NFW8;F5GYM0 Q53GF0 Q53GF0 CMAS N-acylneuraminate cytidylyltransferase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.86 2 662.858992 1323.70343 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.78 1 72.78 72.28 73.28 0 0 0 0 9.322E-05 1 42659 90.629 42.346 1 10209 1788 3876 3981 15998 15998 EVTEPLNLNPAK 12 1 0 Unmodified _EVTEPLNLNPAK_ 0 0 0 Q53GF0;Q8NFW8;F5GYM0 Q53GF0 Q53GF0 CMAS N-acylneuraminate cytidylyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.8608 2 662.858992 1323.70343 81307.8 0.27039 0.00017923 -0.026714 -1.7707E-05 0.24368 0.00016152 662.859543829168 666.866048835257 71.527 0.34419 71.527 71.352 71.696 0 55 25 4 0 0 0 0.0002174 1 42884 82.287 63.016 1 0.87367 0.89141 0 9275500 3504100 5771400 10210 1788 3876 3981 15999 15999 EVTEPLNLNPAK 12 1 0 Unmodified _EVTEPLNLNPAK_ 0 0 0 Q53GF0;Q8NFW8;F5GYM0 Q53GF0 Q53GF0 CMAS N-acylneuraminate cytidylyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.8668 2 662.858992 1323.70343 75761.57 0.50892 0.00033734 0.44529 0.00029516 0.95421 0.00063251 662.859211677419 666.86636695783 82.874 0.58099 82.874 82.579 83.16 -7.6294E-06 153 35 6 0 0 0 0.01102 1 45088 46.001 34.408 1 1.0969 0.88979 0 2725200 1142900 1582300 10211 1788 3876 3981 16000 16000 EVTEPLNLNPAK 12 1 0 Unmodified _EVTEPLNLNPAK_ 0 0 0 Q53GF0;Q8NFW8;F5GYM0 Q53GF0 Q53GF0 CMAS N-acylneuraminate cytidylyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.8666 2 662.858992 1323.70343 77166.73 0.57965 0.00038422 0.1418 9.3994E-05 0.72145 0.00047822 662.859204858181 666.866055947925 83.116 0.54092 83.116 82.772 83.313 0 132 30 6 0 0 0 0.00086156 2 44407 64.711 46.272 1 0.91563 0.7322 0 2429300 1402100 1027100 10212 1788 3876 3981 16001;16002 16001 EVTFSFIPR 9 0 1 Unmodified _EVTFSFIPR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.299 2 548.295299 1094.57605 84624.88 0.74389 0.00040787 0.19728 0.00010817 0.94118 0.00051604 548.29536829895 553.299277467635 104.64 0.75349 104.64 104.3 105.06 0 274 63 6 0 0 0 0.0028653 1 64581 73.248 61.479 1 1.0071 1.0566 0 12078000 5344000 6733700 10213 1392 3877 3982 16003 16003 EVTFSFIPR 9 0 1 Unmodified _EVTFSFIPR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.3007 2 548.295299 1094.57605 83606.72 0.34709 0.00019031 0.33888 0.00018581 0.68597 0.00037612 548.295473244136 553.299363413875 103.82 0.71899 103.82 103.46 104.18 0 248 62 6 0 0 0 0.019553 1 65508 51.059 42.641 1 1.0326 1.0217 0 15362000 6994600 8367800 10214 1392 3877 3982 16004 16004 EVTFSFIPR 9 0 1 Unmodified _EVTFSFIPR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.2959 2 548.295299 1094.57605 84385.46 0.47867 0.00026245 0.29032 0.00015918 0.76899 0.00042163 548.295381580571 553.299484867582 116.27 0.47853 116.27 115.98 116.45 0 89 20 6 0 0 0 0.010479 2 68277 59.245 49.657 1 1.262 1.055 0 3544100 1673600 1870500 10215 1392 3877 3982 16005;16006 16006 EVTFSFIPR 9 0 1 Unmodified _EVTFSFIPR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.2958 2 548.295299 1094.57605 84455.95 0.84296 0.00046219 0.22863 0.00012536 1.0716 0.00058755 548.295534351513 553.299387552101 116.03 0.81122 116.03 115.57 116.38 -7.6294E-06 118 39 6 0 0 0 0.021548 2 67175 49.418 39.83 1 1.241 1.0973 0 3931100 1630900 2300200 10216 1392 3877 3982 16007;16008 16008 EVTFVPGLYK 10 1 0 Unmodified _EVTFVPGLYK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.8188 2 576.818607 1151.62266 80225.43 0.61375 0.00035402 0.17047 9.8332E-05 0.78422 0.00045236 576.818702537399 580.825728093542 94.492 2.183 94.492 93.833 96.016 0 1090 188 10 0 0 0 0.00021956 4 57547 93.429 93.429 1 0.75153 0.90482 0 1302700000 743930000 558800000 10217 1471;1679 3878 3983 16009;16010;16011;16012 16012 EVTFVPGLYK 10 1 0 Unmodified _EVTFVPGLYK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.826 2 576.818607 1151.62266 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.288 1 96.288 95.788 96.788 7.6294E-06 0 0 0 0.043882 1 58650 45.68 21.725 1 10218 1471;1679 3878 3983 16013 16013 EVTFVPGLYK 10 1 0 Unmodified _EVTFVPGLYK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.8264 2 576.818607 1151.62266 79622.75 0.62651 0.00036138 0.12521 7.2221E-05 0.75171 0.0004336 576.818816552788 580.825655605517 93.651 2.1639 93.651 92.945 95.108 0 1080 188 11 0 0 0 2.966E-09 4 58271 125.31 125.31 1 0.75776 0.89642 0 1881400000 1087700000 793660000 10219 1471;1679 3878 3983 16014;16015;16016;16017 16017 EVTFVPGLYK 10 1 0 Unmodified _EVTFVPGLYK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1161.0573 1 1152.62994 1151.62266 57028.05 0.034674 3.9966E-05 0.80033 0.00092249 0.835 0.00096245 1152.63051824392 1160.64533386022 93.651 0.45769 93.651 93.28 93.738 0 135 41 4 0 0 0 0.03866 1 57899 46.426 42.854 1 0.7414 0.7507 0 29154000 16122000 13032000 10220 1471;1679 3878 3983 16018 16018 EVTFVPGLYK 10 1 0 Unmodified _EVTFVPGLYK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.8186 2 576.818607 1151.62266 79011.38 0.61939 0.00035727 -0.076353 -4.4042E-05 0.54303 0.00031323 576.818706128756 580.825572783697 107.45 2.6379 107.45 106.99 109.62 0 758 139 12 0 0 0 0.0036243 4 61328 63.673 63.673 1 1.3172 1.1604 0 253120000 106440000 146670000 10221 1471;1679 3878 3983 16019;16020;16021;16022 16020 EVTFVPGLYK 10 1 0 Unmodified _EVTFVPGLYK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.8188 2 576.818607 1151.62266 79292.09 0.48419 0.00027929 0.068676 3.9613E-05 0.55286 0.0003189 576.81877107027 580.825659624604 107.27 2.2585 107.27 106.8 109.06 7.6294E-06 816 126 12 0 0 0 0.0030376 4 60822 66.351 66.351 1 1.3489 1.1662 0 226890000 93063000 133820000 10222 1471;1679 3878 3983 16023;16024;16025;16026 16026 EVTFVPGLYK 10 1 0 Unmodified _EVTFVPGLYK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.8258 2 576.818607 1151.62266 80779.05 0.60002 0.0003461 0.96089 0.00055426 1.5609 0.00090036 576.818316641424 581.328228799586 109.5 0.33907 109.5 109.38 109.72 0 36 15 4 0 0 0 0.034405 2 62191 41.029 31.441 1 0.72949 0.64141 0 1122200 553020 569200 10223 1471;1679 3878 3983 16027;16028 16027 EVTINQSLLAPLR 13 0 1 Unmodified _EVTINQSLLAPLR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.4231 2 727.422291 1452.83003 71050.17 1.0682 0.000777 0.22426 0.00016313 1.2924 0.00094014 727.422437801651 732.42669006572 108.7 0.86355 108.7 108.47 109.33 0 321 57 8 0 0 0 5.1868E-19 2 67965 146.11 146.11 1 1.0158 1.1802 0 179050000 89860000 89194000 + 10224 1171;1158 3879 3984 16029;16030 16030 EVTINQSLLAPLR 13 0 1 Unmodified _EVTINQSLLAPLR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.4266 2 727.422291 1452.83003 70023.1 0.70953 0.00051613 0.022048 1.6038E-05 0.73158 0.00053217 727.42232084008 732.426391129201 108.17 0.73805 108.17 107.85 108.59 0 351 51 9 0 0 0 1.8952E-13 2 69025 129.85 120.66 1 0.95186 1.0838 0 129850000 62466000 67389000 + 10225 1171;1158 3879 3984 16031;16032 16031 EVTINQSLLAPLR 13 0 1 Unmodified _EVTINQSLLAPLR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.427 2 727.422291 1452.83003 70791.44 0.68661 0.00049946 0.23063 0.00016777 0.91724 0.00066722 727.422350595429 732.426745059774 120.11 0.46215 120.11 119.9 120.36 7.6294E-06 126 19 10 0 0 0 1.0614E-60 2 71232 201.33 189.12 1 1.0102 0.85749 0 33211000 16715000 16496000 + 10226 1171;1158 3879 3984 16033;16034 16034 EVTINQSLLAPLR 13 0 1 Unmodified _EVTINQSLLAPLR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.4266 2 727.422291 1452.83003 70423.7 0.80821 0.00058791 -0.079039 -5.7495E-05 0.72917 0.00053041 727.422278657352 732.426313983087 119.88 0.54366 119.88 119.65 120.2 0 118 22 9 0 0 0 1.8744E-19 2 70145 148.96 132.33 1 1.1089 0.9677 0 69813000 33593000 36220000 + 10227 1171;1158 3879 3984 16035;16036 16036 EVTLALLSLPETHLVTQQPTK 21 1 0 Unmodified _EVTLALLSLPETHLVTQQPTK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 773.7723 3 773.437047 2317.28931 69031.63 0.78428 0.00060659 0.24365 0.00018845 1.0279 0.00079503 773.771733434146 776.442784305544 130.56 0.45352 130.56 130.39 130.84 0 143 22 8 0 0 0 5.7371E-06 1 79201 34.346 34.346 1 1.3591 1.0571 0 12492000 5324900 7167200 10228 1392 3880 3985 16037 16037 EVTLGQVAK 9 1 0 Unmodified _EVTLGQVAK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7741 2 472.7742 943.533846 89004.29 0.40487 0.00019141 0.077276 3.6534E-05 0.48214 0.00022794 472.773977222796 476.781437760917 42.95 0.30753 42.95 42.76 43.067 0 98 24 6 0 0 0 0.0038742 2 22891 70.69 22.575 1 1.8241 1.7969 0 24356000 7495400 16861000 10229 397;1622 3881 3986 16038;16039 16039 EVTLGQVAK 9 1 0 Unmodified _EVTLGQVAK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.7822 2 472.7742 943.533846 89692.26 0.26067 0.00012324 0.29292 0.00013849 0.55359 0.00026172 472.774153750468 476.78146701412 41.768 0.66497 41.768 41.436 42.101 -3.8147E-06 160 58 4 0 0 0 0.021489 1 22413 49.442 21.335 1 1.8464 1.996 0 21949000 8443300 13506000 10230 397;1622 3881 3986 16040 16040 EVTLNLYDTAGQEDYDR 17 0 1 Unmodified _EVTLNLYDTAGQEDYDR_ 0 0 0 F5GXB1;A8K0B7;Q9HBH0 F5GXB1 F5GXB1 RHOF Rho-related GTP-binding protein RhoF MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1006.4601 2 1001.45544 2000.89633 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.864 1 90.864 90.364 91.364 0 0 0 0 0.0013889 1 54939 56.205 43.004 1 10231 698 3882 3987 16041 16041 EVTPEGLQMVK 11 1 0 Oxidation (M) _EVTPEGLQM(ox)VK_ EVTPEGLQM(1)VK EVTPEGLQM(107.57)VK 0 1 0 E9PBS1;A0A024RD93;P22234;D6RF62;B4DGX3 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.8292 2 623.821021 1245.62749 76526.29 1.0769 0.00067177 0.65915 0.00041119 1.736 0.001083 623.821529760332 627.82822977475 49.967 0.38442 49.967 49.779 50.163 0 87 34 4 0 0 0 6.3906E-06 1 27506 107.57 88.303 1 1.5193 1.4894 0 22510000 9960700 12549000 10232 380 3883 3988 16042 16042 279 EVTPEGLQMVK 11 1 0 Oxidation (M) _EVTPEGLQM(ox)VK_ EVTPEGLQM(1)VK EVTPEGLQM(97.64)VK 0 1 0 E9PBS1;A0A024RD93;P22234;D6RF62;B4DGX3 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.8295 2 623.821021 1245.62749 78771.03 0.60665 0.00037844 0.38922 0.00024281 0.99587 0.00062124 623.821735265924 627.828435477831 48.835 0.59565 48.835 48.529 49.125 0 120 47 4 0 0 0 4.2836E-05 1 27331 97.635 82.375 1 1.489 1.545 0 18820000 5395100 13425000 10233 380 3883 3988 16043 16043 279 EVTPESGPPK 10 1 0 Unmodified _EVTPESGPPK_ 0 0 0 P46087;F5H5X6;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.7739 2 520.766571 1039.51859 NaN NaN NaN 0.20554 0.00010704 NaN NaN NaN NaN 21.696 0.43226 21.696 21.442 21.875 -1.9073E-06 0 0 0 0.015301 1 7923 57.859 25.504 1 NaN NaN 0 26533000 0 26533000 10234 1570 3884 3989 16044 16044 EVTPESGPPK 10 1 0 Unmodified _EVTPESGPPK_ 0 0 0 P46087;F5H5X6;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.7735 2 520.766571 1039.51859 83925.55 0.15136 7.8823E-05 -0.13942 -7.2605E-05 0.011942 6.2187E-06 520.765869927344 524.773679208774 21.535 0.99796 21.535 21.243 22.241 0 102 35 7 0 0 0 4.7334E-08 2 7618 116.37 81.016 1 0.96357 1.0844 0 56745000 28239000 28506000 10235 1570 3884 3989 16045;16046 16045 EVTPESGPPK 10 1 0 Unmodified _EVTPESGPPK_ 0 0 0 P46087;F5H5X6;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.7666 2 520.766571 1039.51859 84784.03 0.15146 7.8875E-05 -0.30133 -0.00015692 -0.14987 -7.8048E-05 520.76574932517 524.773659116395 23.562 0.5619 23.562 23.31 23.872 0 119 28 8 0 0 0 0.0030553 2 7986 66.27 42.067 1 1.1455 0.91982 0 7983800 3811100 4172600 10236 1570 3884 3989 16047;16048 16048 EVTPESGPPK 10 1 0 Unmodified _EVTPESGPPK_ 0 0 0 P46087;F5H5X6;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.7666 2 520.766571 1039.51859 84674.5 0.14611 7.6092E-05 0.25057 0.00013049 0.39669 0.00020658 520.766599612997 524.773671503127 23.493 0.42191 23.493 23.304 23.726 0 100 22 6 0 0 0 0.0067028 2 7461 58.433 25.541 1 1.3202 1.0816 0 4981300 2170000 2811200 10237 1570 3884 3989 16049;16050 16050 EVTQATQPEAIPQGTNITEEK 21 1 0 Unmodified _EVTQATQPEAIPQGTNITEEK_ 0 0 0 H7C2V9;A6NE70;B3KTC2;H9A532;Q6W2J9;H7BYY2;E3UVQ2 H7C2V9 H7C2V9 BCOR;BCOR-RARA BCL-6 corepressor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1146.5773 2 1142.56879 2283.12303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.048 1 68.048 67.548 68.548 0 0 0 0 0.039091 1 40365 32.275 4.4136 1 10238 678 3885 3990 16051 16051 EVTTLTADPPDGIK 14 1 0 Unmodified _EVTTLTADPPDGIK_ 0 0 0 K7EPJ1;Q16763;K7EM75;Q6NXQ4;Q2QD04 K7EPJ1 K7EPJ1 UBE2S Ubiquitin-conjugating enzyme E2 S ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.8868 2 728.880121 1455.74569 NaN NaN NaN 0.51645 0.00037643 NaN NaN NaN NaN 70.575 0.67978 70.575 70.336 71.016 0 0 0 0 0.01076 1 42097 51.567 33.255 1 NaN NaN 0 11889000 0 11889000 10239 1343 3886 3991 16052 16052 EVVAEVVK 8 1 0 Unmodified _EVVAEVVK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.7591 2 436.758018 871.501483 90585.87 0.32354 0.00014131 0.19138 8.3588E-05 0.51493 0.0002249 436.758162635521 440.765020866754 41.362 0.52378 41.362 41.171 41.695 0 188 44 6 0 0 0 0.0029107 2 21760 98.457 55.243 1 0.86367 0.9727 0 116620000 60591000 56033000 10240 1398 3887 3992 16053;16054 16054 EVVAEVVK 8 1 0 Unmodified _EVVAEVVK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.7651 2 436.758018 871.501483 89824.3 0.4192 0.00018309 -0.10851 -4.7394E-05 0.31068 0.00013569 436.75792815692 440.764942860282 40.369 0.42602 40.369 40.154 40.58 0 134 36 6 0 0 0 0.0088018 2 21469 77.058 45.768 1 0.83546 0.9754 0 272540000 154140000 118400000 10241 1398 3887 3992 16055;16056 16056 EVVAEVVK 8 1 0 Unmodified _EVVAEVVK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 440.7651 2 436.758018 871.501483 89888.84 -0.30689 -0.00013404 0.53378 0.00023313 0.22689 9.9096E-05 436.758079685629 440.765273759195 46.912 0.8259 46.912 46.638 47.464 -3.8147E-06 221 62 6 0 0 0 0.013762 3 22633 64.567 36.144 1 0.77742 0.60489 0 12443000 6862500 5580300 10242 1398 3887 3992 16057;16058;16059 16058 EVVAEVVK 8 1 0 Unmodified _EVVAEVVK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 440.7649 2 436.758018 871.501483 91875.76 -0.36294 -0.00015852 0.26552 0.00011597 -0.09742 -4.2549E-05 436.758134498023 440.765288106501 46.939 0.73754 46.939 46.694 47.432 3.8147E-06 242 57 9 0 0 0 0.032325 1 22076 50.703 27.18 1 0.80922 0.64981 0 14785000 8795900 5989500 10243 1398 3887 3992 16060 16060 EVVCTTQNTPTVK 13 1 0 Unmodified _EVVCTTQNTPTVK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.8802 2 738.871773 1475.72899 73508.34 0.5516 0.00040756 0.24317 0.00017967 0.79477 0.00058723 738.872174588142 742.878999204469 41.285 0.37188 41.285 41.091 41.462 0 72 26 4 0 0 0 0.012922 1 19128 38.875 32.771 1 1.7044 1.4204 0 1753800 659860 1094000 10244 873 3888 3993 16061 16061 EVVCTTQNTPTVK 13 1 0 Unmodified _EVVCTTQNTPTVK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 743.3798 2 738.871773 1475.72899 71573.99 0.39328 0.00029058 -0.13338 -9.8553E-05 0.2599 0.00019203 739.372766484489 742.878693385719 41.552 0.36515 41.552 41.358 41.724 0 73 25 4 0 0 0 0.014423 1 18697 37.18 37.18 1 2.2703 1.9186 0 1470100 472670 997430 10245 873 3888 3993 16062 16062 EVVDEGLIPGDGLGAAGLDSSFYGHLK 27 1 0 Unmodified _EVVDEGLIPGDGLGAAGLDSSFYGHLK_ 0 0 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 909.1262 3 906.120335 2715.33918 63563.17 0.5497 0.0004981 0.3114 0.00028216 0.8611 0.00078026 906.789195889568 909.126295210089 117.28 0.45893 117.28 117.05 117.51 0 138 27 7 0 0 0 4.024E-07 1 76832 46.695 46.695 1 0.97568 0.98916 0 29483000 14322000 15162000 10246 1699 3889 3994 16063 16063 EVVDEGLIPGDGLGAAGLDSSFYGHLK 27 1 0 Unmodified _EVVDEGLIPGDGLGAAGLDSSFYGHLK_ 0 0 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 909.1271 3 906.120335 2715.33918 NaN NaN NaN -0.92309 -0.00083643 NaN NaN NaN NaN 129.34 0.60881 129.34 129.14 129.75 1.5259E-05 0 0 0 1.8143E-06 1 78193 46.66 39.039 1 NaN NaN 0 8806100 0 8806100 10247 1699 3889 3994 16064 16064 EVVDEGLIPGDGLGAAGLDSSFYGHLK 27 1 0 Unmodified _EVVDEGLIPGDGLGAAGLDSSFYGHLK_ 0 0 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 909.1266 3 906.120335 2715.33918 NaN NaN NaN -0.6265 -0.00056769 NaN NaN NaN NaN 129.23 0.55176 129.23 129 129.55 0 0 0 0 6.7713E-11 2 77212 60.621 52.999 1 NaN NaN 0 13667000 0 13667000 10248 1699 3889 3994 16065;16066 16065 EVVECQSTSTVGGQSVK 17 1 0 Unmodified _EVVECQSTSTVGGQSVK_ 0 0 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.9312 2 897.930548 1793.84654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.806 1 34.806 34.306 35.306 0 0 0 0 1.8461E-12 1 17465 113.24 93.581 1 10249 1991 3890 3995 16067 16067 EVVECQSTSTVGGQSVK 17 1 0 Unmodified _EVVECQSTSTVGGQSVK_ 0 0 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.9319 2 897.930548 1793.84654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.971 1 34.971 34.471 35.471 0 0 0 0 0.00076245 1 17538 57.106 42.687 1 10250 1991 3890 3995 16068 16068 EVVECQSTSTVGGQSVK 17 1 0 Unmodified _EVVECQSTSTVGGQSVK_ 0 0 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.9301 2 897.930548 1793.84654 NaN NaN NaN 0.10368 9.3098E-05 NaN NaN NaN NaN 34.138 0.24167 34.138 33.958 34.2 0 0 0 0 1.056E-18 1 17174 121.04 107.08 1 NaN NaN 0 5581300 5581300 0 10251 1991 3890 3995 16069 16069 EVVECQSTSTVGGQSVK 17 1 0 Unmodified _EVVECQSTSTVGGQSVK_ 0 0 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.9378 2 897.930548 1793.84654 64987.43 0.23786 0.00021358 0.20771 0.00018651 0.44557 0.00040009 898.432817336074 901.937748634818 40.488 0.39912 40.488 40.293 40.692 0 130 30 7 0 0 0 0.0029656 1 18616 36.292 36.292 1 1.0918 0.86517 0 4821800 2092000 2729800 10252 1991 3890 3995 16070 16070 EVVEQGLLK 9 1 0 Unmodified _EVVEQGLLK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.8023 2 507.795132 1013.57571 NaN NaN NaN -0.11686 -5.934E-05 NaN NaN NaN NaN 57.677 0.58099 57.677 57.406 57.987 0 0 0 0 0.0020713 1 32573 82.671 36.656 1 NaN NaN 0 28877000 0 28877000 10253 1997 3891 3996 16071 16071 EVVEQGLLK 9 1 0 Unmodified _EVVEQGLLK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.795 2 507.795132 1013.57571 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.558 1 57.558 57.058 58.058 0 0 0 0 0.0031544 1 32535 75.109 30.662 1 10254 1997 3891 3996 16072 16072 EVVEQGLLK 9 1 0 Unmodified _EVVEQGLLK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.7955 2 507.795132 1013.57571 85208.55 0.46326 0.00023524 -0.011295 -5.7357E-06 0.45197 0.00022951 507.795050116826 511.802161225956 56.676 0.66423 56.676 56.409 57.073 0 232 49 6 0 0 0 0.0011603 2 32576 89.142 39.016 1 0.87734 0.97365 0 48693000 25249000 23444000 10255 1997 3891 3996 16073;16074 16074 EVVEQGLLK 9 1 0 Unmodified _EVVEQGLLK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.8026 2 507.795132 1013.57571 NaN NaN NaN -0.15573 -7.9079E-05 NaN NaN NaN NaN 66.655 0.66541 66.655 66.309 66.974 0 0 0 0 0.011876 1 34537 65.252 26.46 1 NaN NaN 0 4819800 0 4819800 10256 1997 3891 3996 16075 16075 EVVEQGLLK 9 1 0 Unmodified _EVVEQGLLK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.8022 2 507.795132 1013.57571 85201.1 0.29563 0.00015012 -0.22943 -0.0001165 0.066204 3.3618E-05 507.795104898982 511.802144613062 67.036 1.0526 67.036 66.687 67.74 7.6294E-06 217 61 7 0 0 0 0.0064086 2 33944 64.265 30.468 1 0.80265 0.65605 0 8223100 4202700 4020400 10257 1997 3891 3996 16076;16077 16076 EVVETPLLHPER 12 0 1 Unmodified _EVVETPLLHPER_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.9288 3 473.592786 1417.75653 NaN NaN NaN -0.052358 -2.4796E-05 NaN NaN NaN NaN 63.356 0.73715 63.356 62.985 63.722 0 0 0 0 0.0043638 1 37097 53.252 38.565 1 NaN NaN 0 9175900 0 9175900 10258 620 3892 3997 16078 16078 EVVHTVSLHEIDVINSR 17 0 1 Unmodified _EVVHTVSLHEIDVINSR_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.0162 3 649.681323 1946.02214 75518.21 0.59598 0.0003872 0.043232 2.8087E-05 0.63921 0.00041528 650.0159985597 653.017291473632 90.16 0.45744 90.16 90.001 90.459 0 227 34 9 0 0 0 0.0060232 2 49941 25.611 25.611 1 1.1288 0.95379 0 9537600 3907100 5630600 10259 2120 3893 3998 16079;16080 16080 EVVHTVSLHEIDVINSR 17 0 1 Unmodified _EVVHTVSLHEIDVINSR_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.3519 3 649.681323 1946.02214 74789.25 0.42501 0.00027612 0.16808 0.0001092 0.5931 0.00038532 650.015936455268 653.017348684565 89.819 0.44616 89.819 89.635 90.081 0 137 28 6 0 0 0 0.00339 1 48831 31.115 28.402 1 1.1347 0.94168 0 7741700 3875200 3866500 10260 2120 3893 3998 16081 16081 EVVSLLLDDEELEK 14 1 0 Unmodified _EVVSLLLDDEELEK_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6;Q9NUK2;Q6N074;A0A087X0U7 A0A024R9R7 A0A024R9R7 INOC1;INO80;DKFZp686N224 DNA helicase INO80 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.925 2 815.924726 1629.8349 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.72 1 112.72 112.22 113.22 0 0 0 0 0.0082074 1 71225 53.08 39.311 1 10261 288 3894 3999 16082 16082 EVVSLLLDDEELEK 14 1 0 Unmodified _EVVSLLLDDEELEK_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6;Q9NUK2;Q6N074;A0A087X0U7 A0A024R9R7 A0A024R9R7 INOC1;INO80;DKFZp686N224 DNA helicase INO80 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.9258 2 815.924726 1629.8349 NaN NaN NaN 0.35367 0.00028856 NaN NaN NaN NaN 112.22 0.36835 112.22 112.03 112.4 0 0 0 0 0.0029928 1 72579 63.727 38.872 1 NaN NaN 0 5140200 5140200 0 10262 288 3894 3999 16083 16083 EVVVSVPQR 9 0 1 Unmodified _EVVVSVPQR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7964 2 506.792924 1011.57129 86527.17 0.046573 2.3603E-05 -0.36819 -0.00018659 -0.32161 -0.00016299 506.792708273301 511.796781402019 47.805 0.32034 47.805 47.659 47.979 0 88 22 6 0 0 0 0.0074668 1 26626 61.962 45.719 1 0.64247 0.67402 0 22888000 14538000 8349600 10263 1937 3895 4000 16084 16084 EVVVVGATNRPDALDPALR 19 0 2 Unmodified _EVVVVGATNRPDALDPALR_ 0 0 1 Q9BVQ7 Q9BVQ7 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.7023 3 664.700606 1991.07999 NaN NaN NaN 0.89343 0.00059386 NaN NaN NaN NaN 84.161 0.078812 84.161 84.134 84.212 0 0 0 0 0.0091833 1 51628 40.856 32.036 1 NaN NaN 0 2286500 2286500 0 10264 2009 3896 4001 16085 16085 EVYLHAIVR 9 0 1 Unmodified _EVYLHAIVR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;B4DT32;H0Y426 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.3205 2 550.316566 1098.61858 86671.67 0.67984 0.00037413 0.017255 9.4954E-06 0.69709 0.00038362 550.317064016833 555.320048650315 57.344 1.0419 57.344 56.705 57.747 0 151 83 4 0 0 0 0.016119 1 32108 54.157 25.983 1 1.1059 1.1457 0 5857000 2634000 3223000 10265 363 3897 4002 16086 16086 EVYMTPLR 8 0 1 Oxidation (M) _EVYM(ox)TPLR_ EVYM(1)TPLR EVYM(89.55)TPLR 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.7646 2 512.760235 1023.50592 83801.2 0.79715 0.00040874 -0.082401 -4.2252E-05 0.71474 0.00036649 512.76013663812 517.764227198392 44.392 0.83566 44.392 43.964 44.799 0 331 74 6 0 0 0 0.0027749 1 23685 89.55 57.079 1 1.0369 1.1632 0 91999000 44650000 47349000 10266 1995 3898 4003 16087 16087 1824 EVYMTPLR 8 0 1 Oxidation (M) _EVYM(ox)TPLR_ EVYM(1)TPLR EVYM(99)TPLR 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.7642 2 512.760235 1023.50592 83458.23 0.88704 0.00045484 -0.46268 -0.00023724 0.42436 0.0002176 512.759939892793 517.764075285575 43.705 0.57711 43.705 43.33 43.907 0 240 44 8 0 0 0 0.0013275 2 23627 98.997 54.304 1 1.0101 1.1576 0 173660000 81582000 92073000 10267 1995 3898 4003 16088;16089 16088 1824 EVYMTPLR 8 0 1 Oxidation (M) _EVYM(ox)TPLR_ EVYM(1)TPLR EVYM(58.6)TPLR 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.7646 2 512.760235 1023.50592 83443.58 0.22823 0.00011703 0.25924 0.00013293 0.48747 0.00024995 512.760212361142 517.764351515379 50.962 0.89956 50.962 50.606 51.505 0 248 61 7 0 0 0 0.0098117 2 24997 58.604 33.991 1 1.0876 0.90569 0 10694000 4810000 5884100 10268 1995 3898 4003 16090;16091 16091 1824 EVYQQQQYGSGGR 13 0 1 Unmodified _EVYQQQQYGSGGR_ 0 0 0 D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729 D6R9P3 D6R9P3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.3641 2 750.347311 1498.68007 NaN NaN NaN -0.49875 -0.00037424 NaN NaN NaN NaN 22.14 0.13837 22.14 22.04 22.179 -1.9073E-06 0 0 0 0.00026722 2 8256 88.056 76.463 1 NaN NaN 0 3264700 0 3264700 10269 1008 3899 4004 16092;16093 16092 EVYQQQQYGSGGR 13 0 1 Unmodified _EVYQQQQYGSGGR_ 0 0 0 D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729 D6R9P3 D6R9P3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.3519 2 750.347311 1498.68007 NaN NaN NaN -3.1073 -0.0023316 NaN NaN NaN NaN 22.006 0.24118 22.006 21.866 22.107 0 0 0 0 3.5616E-09 1 8014 113.63 94.884 1 NaN NaN 0 4139600 0 4139600 10270 1008 3899 4004 16094 16094 EWGSGSDTLR 10 0 1 Unmodified _EWGSGSDTLR_ 0 0 0 A0A0S2Z3L2;P16615;H7C5W9 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.2604 2 554.256902 1106.49925 NaN NaN NaN -1.17 -0.00064851 NaN NaN NaN NaN 40.552 0.46201 40.552 40.428 40.89 0 0 0 0 0.016683 1 21277 56.432 41.656 1 NaN NaN 0 4916100 0 4916100 10271 554 3900 4005 16095 16095 EWGSGSDTLR 10 0 1 Unmodified _EWGSGSDTLR_ 0 0 0 A0A0S2Z3L2;P16615;H7C5W9 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.2603 2 554.256902 1106.49925 NaN NaN NaN -2.3342 -0.0012937 NaN NaN NaN NaN 39.521 0.27385 39.521 39.408 39.682 0 0 0 0 0.018622 1 20978 54.982 29.043 1 NaN NaN 0 6251800 0 6251800 10272 554 3900 4005 16096 16096 EWLIEVPGNADPLEDQFAK 19 1 0 Unmodified _EWLIEVPGNADPLEDQFAK_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1090.546 2 1086.0364 2170.05825 57319.64 0.51618 0.00056059 1.5488 0.0016821 2.065 0.0022427 1086.53908384533 1090.54489733017 125.52 0.71579 125.52 125.25 125.96 0 270 48 9 0 0 0 8.9577E-06 3 81510 74.76 66.69 1 0.71573 0.77118 0 33796000 18751000 15046000 10273 1750 3901 4006 16097;16098;16099 16099 EWLIEVPGNADPLEDQFAK 19 1 0 Unmodified _EWLIEVPGNADPLEDQFAK_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1086.5399 2 1086.0364 2170.05825 NaN NaN NaN 0.77468 0.00084133 NaN NaN NaN NaN 125.14 0.73036 125.14 124.94 125.67 -7.6294E-06 0 0 0 7.6668E-08 1 83243 80.245 38.961 1 NaN NaN 0 26520000 26520000 0 10274 1750 3901 4006 16100 16100 EWLIEVPGNADPLEDQFAK 19 1 0 Unmodified _EWLIEVPGNADPLEDQFAK_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1085.8678 2 1086.0364 2170.05825 56407.36 0.22377 0.00024302 0.14895 0.00016176 0.37271 0.00040478 1086.53768145042 1090.54480755239 134.62 0.24834 134.62 134.5 134.75 -1.5259E-05 36 6 10 0 0 0 1.5131E-05 3 82286 67.275 67.275 1 1.0597 0.87302 0 40779000 20913000 19865000 10275 1750 3901 4006 16101;16102;16103 16101 EWLLGMLGAESAK 13 1 0 Oxidation (M) _EWLLGM(ox)LGAESAK_ EWLLGM(1)LGAESAK EWLLGM(77.06)LGAESAK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.8687 2 710.860677 1419.7068 70777.3 0.84637 0.00060165 -0.31733 -0.00022557 0.52904 0.00037607 710.860548127055 714.867681132577 106.59 1.4337 106.59 105.99 107.43 -7.6294E-06 638 106 10 0 0 0 5.8396E-05 5 66552 85.813 50.302 1 0.8357 0.96613 0 226800000 120850000 105950000 10276 1471 3902 4007 16104;16105;16106;16107;16108 16107 1195 EWLLGMLGAESAK 13 1 0 Oxidation (M) _EWLLGM(ox)LGAESAK_ EWLLGM(1)LGAESAK EWLLGM(101.39)LGAESAK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.8607 2 710.860677 1419.7068 71401.48 0.80746 0.00057399 -0.088632 -6.3005E-05 0.71882 0.00051098 710.860693239222 714.867826319104 105.95 1.1898 105.95 105.39 106.58 7.6294E-06 608 87 10 0 0 0 4.3362E-06 5 67083 101.39 56.232 1 0.8368 0.98007 0 311320000 168820000 142490000 10277 1471 3902 4007 16109;16110;16111;16112;16113 16110 1195 EWLLGMLGAESAK 13 1 0 Oxidation (M) _EWLLGM(ox)LGAESAK_ EWLLGM(1)LGAESAK EWLLGM(71.56)LGAESAK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.8614 2 710.860677 1419.7068 70269.6 0.96145 0.00068346 0.053938 3.8342E-05 1.0154 0.0007218 710.860745868867 714.867881242583 117.81 1.1551 117.81 117.49 118.64 -7.6294E-06 335 48 10 0 0 0 8.6381E-05 2 69354 71.555 26.394 1 0.95922 0.7909 0 41558000 21529000 20029000 10278 1471 3902 4007 16114;16115 16115 1195 EWLLGMLGAESAK 13 1 0 Oxidation (M) _EWLLGM(ox)LGAESAK_ EWLLGM(1)LGAESAK EWLLGM(89.56)LGAESAK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.8593 2 710.860677 1419.7068 70276.48 1.029 0.00073145 -0.058442 -4.1544E-05 0.97052 0.00068991 710.859573496937 714.867520043265 132.12 0.72818 132.12 131.81 132.54 0 145 34 6 0 0 0 6.6041E-05 2 80231 89.561 44.4 1 1.5512 1.202 0 13442000 5513600 7928900 10279 1471 3902 4007 16116;16117 16117 1195 EWLLGMLGAESAK 13 1 0 Oxidation (M) _EWLLGM(ox)LGAESAK_ EWLLGM(1)LGAESAK EWLLGM(65.4)LGAESAK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.8685 2 710.860677 1419.7068 71562.59 0.54174 0.0003851 0.43185 0.00030698 0.97358 0.00069208 710.860943594858 714.868091317217 117.58 1.0915 117.58 117.26 118.36 0 338 50 9 0 0 0 0.0001478 2 68299 65.395 22.065 1 0.95871 0.7976 0 38834000 19177000 19657000 10280 1471 3902 4007 16118;16119 16118 1195 EWLLGMLGAESAK 13 1 0 Oxidation (M) _EWLLGM(ox)LGAESAK_ EWLLGM(1)LGAESAK EWLLGM(45.26)LGAESAK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.8595 2 710.860677 1419.7068 NaN NaN NaN -0.7309 -0.00051957 NaN NaN NaN NaN 131.87 0.6546 131.87 131.62 132.27 0 0 0 0 0.0078345 1 79142 45.257 13.763 1 NaN NaN 0 4042200 4042200 0 10281 1471 3902 4007 16120 16120 1195 EWLLGMLGAESAK 13 1 0 Oxidation (M) _EWLLGM(ox)LGAESAK_ EWLLGM(1)LGAESAK EWLLGM(103.08)LGAESAK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.8684 2 710.860677 1419.7068 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.79 1 131.79 131.29 132.29 0 0 0 0 6.211E-07 1 79140 103.08 55.896 1 10282 1471 3902 4007 16121 16121 1195 EWLLGMLGAESAK 13 1 0 Unmodified _EWLLGMLGAESAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.8637 2 702.86322 1403.71189 72751.93 0.82689 0.00058119 -0.38554 -0.00027098 0.44135 0.00031021 702.863175742328 706.870264370314 120.06 0.5808 120.06 119.79 120.37 0 244 39 8 0 0 0 0.00013091 2 77210 79.659 79.659 1 0.53231 0.5218 0 22489000 14008000 8480100 10283 1471 3902 4008 16122;16123 16122 EWLLGMLGAESAK 13 1 0 Unmodified _EWLLGMLGAESAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.8633 2 702.86322 1403.71189 72343.95 0.83534 0.00058713 -0.52718 -0.00037054 0.30816 0.00021659 702.863018384988 706.87010073223 119.53 0.58533 119.53 119.22 119.8 0 258 42 8 0 0 0 7.6128E-06 2 78680 103.08 103.08 1 0.53211 0.55241 0 24691000 15169000 9521700 10284 1471 3902 4008 16124;16125 16124 EWLLGMLGAESAK 13 1 0 Unmodified _EWLLGMLGAESAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.8703 2 702.86322 1403.71189 70725.36 1.0096 0.00070962 -0.41853 -0.00029417 0.59109 0.00041546 702.863085830206 706.87011116361 132.12 1.049 132.12 131.79 132.84 0 302 48 11 0 0 0 0.00028714 2 80174 66.267 66.267 1 1.4051 1.1623 0 43854000 19512000 24342000 10285 1471 3902 4008 16126;16127 16127 EWLLGMLGAESAK 13 1 0 Unmodified _EWLLGMLGAESAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 706.8707 2 702.86322 1403.71189 70299.88 1.0396 0.00073066 0.15641 0.00010993 1.196 0.0008406 702.863535150069 706.870571120106 131.88 1.0886 131.88 131.45 132.54 0 261 44 10 0 0 0 8.6728E-11 2 79083 125.23 125.23 1 1.4618 1.2443 0 83783000 33468000 50315000 10286 1471 3902 4008 16128;16129 16128 EWLNSCDLK 9 1 0 Unmodified _EWLNSCDLK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.7799 2 582.771331 1163.52811 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.452 1 65.452 64.952 65.952 0 0 0 0 0.0011497 1 38616 95.741 73.25 1 10287 2148 3903 4009 16130 16130 EWLTNFMEDR 10 0 1 Oxidation (M) _EWLTNFM(ox)EDR_ EWLTNFM(1)EDR EWLTNFM(78.52)EDR 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.7988 2 678.798077 1355.5816 72478.8 0.76747 0.00052095 -0.049796 -3.3802E-05 0.71767 0.00048715 678.798006714887 683.802190242484 84.987 0.9765 84.987 84.691 85.668 0 486 80 8 0 0 0 0.0004631 2 50903 78.516 78.516 1 0.92725 1.0616 0 130590000 68016000 62579000 10288 1471;1679 3904 4010 16131;16132 16132 1196 EWLTNFMEDR 10 0 1 Oxidation (M) _EWLTNFM(ox)EDR_ EWLTNFM(1)EDR EWLTNFM(91.87)EDR 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.8021 2 678.798077 1355.5816 73133.27 0.8742 0.0005934 0.091827 6.2332E-05 0.96603 0.00065574 678.798181276863 683.802285259756 83.953 1.0425 83.953 83.669 84.712 0 404 86 8 0 0 0 0.00012951 2 51450 91.867 88.728 1 0.92762 1.056 0 110360000 58853000 51506000 10289 1471;1679 3904 4010 16133;16134 16134 1196 EWLTNFMEDR 10 0 1 Oxidation (M) _EWLTNFM(ox)EDR_ EWLTNFM(1)EDR EWLTNFM(44.2)EDR 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.7977 2 678.798077 1355.5816 72003.57 0.87583 0.00059451 -0.1174 -7.9689E-05 0.75843 0.00051482 678.797998304805 683.802099724977 96.942 0.94195 96.942 96.618 97.56 0 287 48 8 0 0 0 0.012846 1 54349 44.203 44.203 1 0.78869 0.64612 0 16601000 8865500 7735500 10290 1471;1679 3904 4010 16135 16135 1196 EWLTNFMEDR 10 0 1 Oxidation (M) _EWLTNFM(ox)EDR_ EWLTNFM(1)EDR EWLTNFM(63.28)EDR 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 683.8026 2 678.798077 1355.5816 72053.27 0.85072 0.00057747 0.12177 8.2655E-05 0.97249 0.00066012 678.798179244515 683.802200073901 119.06 0.58249 119.06 118.8 119.38 0 114 26 6 0 0 0 0.0017973 2 70455 63.283 51.793 1 1.4374 1.2366 0 7576300 3150100 4426200 10291 1471;1679 3904 4010 16136;16137 16136 1196 EWLTNFMEDR 10 0 1 Oxidation (M) _EWLTNFM(ox)EDR_ EWLTNFM(1)EDR EWLTNFM(59.91)EDR 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.8032 2 678.798077 1355.5816 72809.48 0.43989 0.0002986 0.31492 0.00021377 0.75481 0.00051237 678.798332858467 683.80247850411 96.944 0.85947 96.944 96.586 97.446 -7.6294E-06 254 40 8 0 0 0 0.0027221 2 53554 59.908 59.908 1 0.79255 0.66178 0 16123000 9065200 7058000 10292 1471;1679 3904 4010 16138;16139 16139 1196 EWLTNFMEDR 10 0 1 Oxidation (M) _EWLTNFM(ox)EDR_ EWLTNFM(1)EDR EWLTNFM(42.74)EDR 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.8033 2 678.798077 1355.5816 72376.34 0.88288 0.00059929 0.067939 4.6117E-05 0.95081 0.00064541 678.79803701136 683.80207109426 118.87 0.57468 118.87 118.59 119.17 -7.6294E-06 123 25 6 0 0 0 0.014604 1 69433 42.743 42.743 1 1.4399 1.1956 0 5865700 2544200 3321500 10293 1471;1679 3904 4010 16140 16140 1196 EWLTNFMEDR 10 0 1 Unmodified _EWLTNFMEDR_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.8016 2 670.80062 1339.58669 75862.88 0.70638 0.00047384 0.16744 0.00011232 0.87382 0.00058616 670.800690736206 675.804894530334 107.99 0.71902 107.99 107.65 108.37 0 192 53 6 0 0 0 0.0034566 1 67196 73.985 73.985 1 0.50924 0.51967 0 14710000 9788700 4921400 10294 1471;1679 3904 4011 16141 16141 EWLTNFMEDR 10 0 1 Unmodified _EWLTNFMEDR_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8009 2 670.80062 1339.58669 75250.84 0.80076 0.00053715 0.13139 8.8134E-05 0.93215 0.00062529 670.800663180741 675.804921061271 107.34 0.72578 107.34 106.98 107.71 0 184 48 6 0 0 0 9.642E-05 2 68382 110.87 110.87 1 0.48138 0.47743 0 15858000 9573300 6284800 10295 1471;1679 3904 4011 16142;16143 16142 EWLTNFMEDR 10 0 1 Unmodified _EWLTNFMEDR_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 670.8012 2 670.80062 1339.58669 74402.36 0.8426 0.00056522 0.032441 2.1761E-05 0.87504 0.00058698 670.800693964767 675.804814839953 119.06 0.86571 119.06 118.74 119.61 0 216 37 10 0 0 0 0.00038381 2 70320 104.2 104.2 1 1.384 1.1561 0 23700000 9837900 13862000 10296 1471;1679 3904 4011 16144;16145 16145 EWLTNFMEDR 10 0 1 Unmodified _EWLTNFMEDR_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.8047 2 670.80062 1339.58669 73384.61 0.84402 0.00056617 0.046557 3.123E-05 0.89057 0.0005974 670.800714951346 675.804813828861 118.86 0.6983 118.86 118.56 119.26 0 178 30 8 0 0 0 0.00038819 2 69266 87.913 87.913 1 1.4216 1.2197 0 21240000 9003900 12237000 10297 1471;1679 3904 4011 16146;16147 16146 EWLTNFMEDRR 11 0 2 Oxidation (M) _EWLTNFM(ox)EDRR_ EWLTNFM(1)EDRR EWLTNFM(43.68)EDRR 0 1 1 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.5744 3 504.901514 1511.68271 83622.31 0.34953 0.00017648 0.20913 0.00010559 0.55865 0.00028207 504.901579978574 511.573857639259 67.157 0.71908 67.157 66.804 67.523 0 305 59 8 0 0 0 0.0070658 1 39677 43.68 43.68 1 1.06 1.208 0 40279000 18905000 21373000 10298 1471;1679 3905 4012 16148 16148 1196 EWLTNFMEDRR 11 0 2 Unmodified _EWLTNFMEDRR_ 0 0 1 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.2418 3 499.569876 1495.6878 85401.88 0.084551 4.2239E-05 -0.55507 -0.00027729 -0.47051 -0.00023505 499.570048393092 506.241535434816 102.83 0.5249 102.83 102.65 103.17 7.6294E-06 149 33 6 0 0 0 0.0081175 1 57521 37.681 37.681 1 1.5202 1.3873 0 8278600 3432200 4846400 10299 1471;1679 3905 4013 16149 16149 EWLVGMLGAESTK 13 1 0 Oxidation (M) _EWLVGM(ox)LGAESTK_ EWLVGM(1)LGAESTK EWLVGM(78.34)LGAESTK 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6;H7BZ82 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.8655 2 718.858135 1435.70172 72453.98 1.0147 0.00072943 0.16371 0.00011769 1.1784 0.00084712 718.857552292914 722.865439632407 93.007 0.88217 93.007 92.55 93.432 0 188 76 4 0 0 0 6.0872E-05 1 56297 78.342 74.187 1 0.658 0.67006 0 13271000 9447100 3824400 10300 1679 3906 4014 16150 16150 1483 EWLVGMLGAESTK 13 1 0 Oxidation (M) _EWLVGM(ox)LGAESTK_ EWLVGM(1)LGAESTK EWLVGM(63.41)LGAESTK 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6;H7BZ82 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.8669 2 718.858135 1435.70172 NaN NaN NaN 0.28165 0.00020247 NaN NaN NaN NaN 92.106 0.42651 92.106 91.979 92.406 0 0 0 0 0.0012175 1 57096 63.408 52.885 1 NaN NaN 0 6462000 0 6462000 10301 1679 3906 4014 16151 16151 1483 EWLVGMLGAESTK 13 1 0 Unmodified _EWLVGMLGAESTK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6;H7BZ82 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.8442 2 710.860677 1419.7068 71741.75 0.81314 0.00057803 -0.94412 -0.00067113 -0.13098 -9.3109E-05 710.85950794552 714.867793905312 121.37 0.32824 121.37 121.26 121.58 0 65 18 6 0 0 0 0.0041828 1 71319 62.633 32.859 1 1.3163 1.0668 0 2687500 1325000 1362500 10302 1679 3906 4015 16152 16152 EWMPVTK 7 1 0 Oxidation (M) _EWM(ox)PVTK_ EWM(1)PVTK EWM(49.06)PVTK 0 1 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;E9PMM9;E9PQD7;E9PPT0;Q8NI61;D3DU83 P15880 P15880 RPS2;OK/KNS-cl.7 40S ribosomal protein S2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.7234 2 453.723121 905.431689 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.997 1 32.997 32.497 33.497 0 0 0 0 0.047562 1 16413 49.058 24.859 1 10303 1485 3907 4016 16153 16153 1244 EWQELDDAEK 10 1 0 Unmodified _EWQELDDAEK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q9NSM5 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.7886 2 631.780407 1261.54626 79437.24 0.44764 0.00028281 0.88628 0.00055993 1.3339 0.00084274 631.780555056248 635.788341645841 50.903 0.52015 50.903 50.721 51.242 0 91 47 4 0 0 0 0.022046 1 28126 46.001 46.001 1 2.7273 2.7731 0 10316000 1618100 8698000 10304 1707 3908 4017 16154 16154 EWSGLLEELAR 11 0 1 Unmodified _EWSGLLEELAR_ 0 0 0 Q01813;Q5VSR5;V9GYV7 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.8427 2 651.838059 1301.66157 76419.89 1.0148 0.00066146 0.64033 0.00041739 1.6551 0.0010788 651.838516746672 656.842365225103 129.65 0.51396 129.65 129.4 129.91 1.5259E-05 83 20 6 0 0 0 0.0023522 1 77581 61.78 50.615 1 1.0236 0.91048 0 2362700 1202300 1160300 10305 1677 3909 4018 16155 16155 EWYGWHFPELGK 12 1 0 Unmodified _EWYGWHFPELGK_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 519.5858 3 516.91386 1547.71975 83551.63 0.73465 0.00037975 0.093713 4.8441E-05 0.82836 0.00042819 517.248174792803 519.585283975149 119.37 0.38002 119.37 119.23 119.61 -7.6294E-06 66 14 8 0 0 0 0.011551 1 70694 34.685 34.685 1 1.1435 0.91452 0 2900600 1298400 1602200 10306 2129 3910 4019 16156 16156 EWYGYHFPELVK 12 1 0 Unmodified _EWYGYHFPELVK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.2576 3 523.257515 1566.75072 84289.16 0.43942 0.00022993 0.14792 7.74E-05 0.58734 0.00030733 523.25746911631 526.263384951014 102.72 1.5818 102.72 101.83 103.41 -7.6294E-06 601 133 6 0 0 0 0.0019496 2 62910 39.006 39.006 1 1.0335 1.0199 0 25073000 13350000 11724000 10307 785 3911 4020 16157;16158 16157 EWYGYHFPELVK 12 1 0 Unmodified _EWYGYHFPELVK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.384 2 784.382634 1566.75072 71221.66 0.60988 0.00047838 0.3992 0.00031313 1.0091 0.00079151 784.382974252605 788.389577673339 102.41 0.62955 102.41 102.05 102.67 0 121 50 5 0 0 0 2.6269E-05 3 63083 100.48 100.48 1 0.57911 0.57941 0 9788300 5251600 4536700 10308 785 3911 4020 16159;16160;16161 16161 EWYGYHFPELVK 12 1 0 Unmodified _EWYGYHFPELVK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.3907 2 784.382634 1566.75072 69125.98 0.61332 0.00048107 -0.50318 -0.00039469 0.11013 8.6384E-05 784.382104322879 788.38928375934 100.94 1.0241 100.94 100.57 101.59 7.6294E-06 298 81 6 0 0 0 2.6037E-05 1 63444 100.58 100.58 1 0.52135 0.53849 0 18412000 10095000 8317400 10309 785 3911 4020 16162 16162 EWYGYHFPELVK 12 1 0 Unmodified _EWYGYHFPELVK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2576 3 523.257515 1566.75072 NaN NaN NaN 0.28963 0.00015155 NaN NaN NaN NaN 101.01 1.2388 101.01 100.45 101.69 0 0 0 0 0.0075612 1 63274 40.066 36.079 1 NaN NaN 0 25753000 25753000 0 10310 785 3911 4020 16163 16163 EWYGYHFPELVK 12 1 0 Unmodified _EWYGYHFPELVK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.2634 3 523.257515 1566.75072 83142.12 0.60628 0.00031724 -0.070951 -3.7126E-05 0.53533 0.00028011 523.59179015561 525.928875319711 112.81 0.63373 112.81 112.54 113.17 0 156 29 8 0 0 0 0.0051404 2 65529 34.685 34.685 1 0.92553 0.73812 0 9529300 5299700 4229600 10311 785 3911 4020 16164;16165 16164 EWYGYHFPELVK 12 1 0 Unmodified _EWYGYHFPELVK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.3843 2 784.382634 1566.75072 67015.85 0.9498 0.000745 -0.28098 -0.00022039 0.66882 0.00052461 784.382645572499 788.389030282803 112.8 0.63588 112.8 112.56 113.19 0 69 29 4 0 0 0 0.00071247 1 65629 66.92 58.191 1 0.90826 0.71668 0 5959700 3277800 2682000 10312 785 3911 4020 16166 16166 EWYGYHFPELVK 12 1 0 Unmodified _EWYGYHFPELVK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.929 3 523.257515 1566.75072 83229.75 0.42978 0.00022488 0.068736 3.5966E-05 0.49851 0.00026085 523.5918295998 525.928877334144 112.59 0.69489 112.59 112.35 113.04 0 200 34 9 0 0 0 0.0051404 2 64451 34.685 34.685 1 0.94067 0.7739 0 10220000 5121400 5098800 10313 785 3911 4020 16167;16168 16168 EWYGYHFPELVK 12 1 0 Unmodified _EWYGYHFPELVK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.3837 2 784.382634 1566.75072 68772.48 0.69812 0.0005476 0.2629 0.00020622 0.96103 0.00075381 785.385861554235 788.389620698237 112.6 0.45016 112.6 112.38 112.83 0 117 22 7 0 0 0 0.00073388 1 64593 66.603 52.368 1 1.0353 0.84689 0 8369200 4255700 4113500 10314 785 3911 4020 16169 16169 EYASEGEPLFAGGSAIPK 18 1 0 Unmodified _EYASEGEPLFAGGSAIPK_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2;H0Y6S1 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 916.4565 2 911.946524 1821.87849 62795.97 0.48496 0.00044226 0.10388 9.4735E-05 0.58885 0.000537 912.448125640125 915.953759760658 106.95 0.51729 106.95 106.7 107.22 0 145 30 7 0 0 0 0.0005624 2 60346 43.594 43.594 1 1.1974 0.98172 0 5064000 2222400 2841600 10315 2118 3912 4021 16170;16171 16170 EYAVNEVVAGIK 12 1 0 Unmodified _EYAVNEVVAGIK_ 0 0 0 B3KWX6;Q53EY5;B3KX14;Q15014;B4DXQ8;H0YM21;Q0VAE4;A0A0A0MT59;H0YMJ0;H0YLJ3;A5D8W6;B3KTM8;Q9UBU8 B3KWX6 B3KWX6 MORF4L2;MORF4L1 Mortality factor 4-like protein 2;Mortality factor 4-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.3489 2 646.34826 1290.68197 75871.73 0.84838 0.00054835 0.34262 0.00022145 1.191 0.0007698 646.347823643783 650.356186897156 97.323 0.47345 97.323 97.123 97.596 0 79 23 6 0 0 0 0.0025251 1 54788 58.37 58.37 1 0.57177 0.45012 0 3103400 1920900 1182500 10316 950 3913 4022 16172 16172 EYAVNEVVAGIK 12 1 0 Unmodified _EYAVNEVVAGIK_ 0 0 0 B3KWX6;Q53EY5;B3KX14;Q15014;B4DXQ8;H0YM21;Q0VAE4;A0A0A0MT59;H0YMJ0;H0YLJ3;A5D8W6;B3KTM8;Q9UBU8 B3KWX6 B3KWX6 MORF4L2;MORF4L1 Mortality factor 4-like protein 2;Mortality factor 4-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.3496 2 646.34826 1290.68197 76512.63 0.44043 0.00028467 0.19585 0.00012659 0.63629 0.00041126 646.348144449593 650.355437242357 97.157 0.42452 97.157 96.997 97.421 0 82 20 6 0 0 0 0.0063345 1 53875 49.3 49.3 1 0.57078 0.44924 0 3265500 2006400 1259100 10317 950 3913 4022 16173 16173 EYDELAETQGK 11 1 0 Unmodified _EYDELAETQGK_ 0 0 0 A8K2R3;O60341;R4GMQ1 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.793 2 641.793514 1281.57248 82549.63 0.79716 0.00051161 -0.49493 -0.00031764 0.30223 0.00019397 641.79312423114 645.800224792797 35.692 0.37809 35.692 35.491 35.869 0 81 35 4 0 0 0 3.0806E-10 1 17965 133.13 125.91 1 0.79724 0.81777 0 10617000 6460900 4156200 10318 711 3914 4023 16174 16174 EYDELAETQGK 11 1 0 Unmodified _EYDELAETQGK_ 0 0 0 A8K2R3;O60341;R4GMQ1 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.7928 2 641.793514 1281.57248 NaN NaN NaN -0.32846 -0.0002108 NaN NaN NaN NaN 34.868 0.43801 34.868 34.712 35.15 -3.8147E-06 0 0 0 6.0014E-16 1 17672 131.5 109.01 1 NaN NaN 0 5040000 5040000 0 10319 711 3914 4023 16175 16175 EYDELAETQGK 11 1 0 Unmodified _EYDELAETQGK_ 0 0 0 A8K2R3;O60341;R4GMQ1 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.8 2 641.793514 1281.57248 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.785 1 34.785 34.285 35.285 0 0 0 0 0.025366 1 17646 51.092 29.585 1 10320 711 3914 4023 16176 16176 EYDELAETQGK 11 1 0 Unmodified _EYDELAETQGK_ 0 0 0 A8K2R3;O60341;R4GMQ1 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.8019 2 641.793514 1281.57248 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.813 1 34.813 34.313 35.313 0 0 0 0 0.0073327 1 17666 62.303 40.155 1 10321 711 3914 4023 16177 16177 EYDELAETQGK 11 1 0 Unmodified _EYDELAETQGK_ 0 0 0 A8K2R3;O60341;R4GMQ1 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.9931 2 641.793514 1281.57248 78590.93 0.32286 0.00020721 0.32456 0.0002083 0.64742 0.00041551 641.7936225367 645.800739217587 41.306 0.46785 41.306 41.091 41.559 0 99 36 4 0 0 0 0.053094 1 18574 54.608 51.198 1 1.2391 1.0423 0 1490700 669360 821350 10322 711 3914 4023 16178 16178 EYEATLEECCAK 12 1 0 Unmodified _EYEATLEECCAK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.8112 2 751.810524 1501.6065 NaN NaN NaN -0.082293 -6.1869E-05 NaN NaN NaN NaN 41.079 0.38358 41.079 40.857 41.24 0 0 0 0 0.026123 1 21452 48.981 36.404 1 NaN NaN 0 6868900 6868900 0 + 10323 1153 3915 4024 16179 16179 EYEATLEECCAK 12 1 0 Unmodified _EYEATLEECCAK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.8109 2 751.810524 1501.6065 NaN NaN NaN -0.22209 -0.00016697 NaN NaN NaN NaN 47.832 0.52186 47.832 47.547 48.069 0 0 0 0 0.0063834 1 23156 60.434 54.05 1 NaN NaN 0 2954200 2954200 0 + 10324 1153 3915 4024 16180 16180 EYEIPSNLTPADVFFR 16 0 1 Unmodified _EYEIPSNLTPADVFFR_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 954.978 2 949.470166 1896.92578 61722.87 0.90752 0.00086167 0.75967 0.00072129 1.6672 0.001583 949.973000544501 954.474584665907 125.68 0.41219 125.68 125.43 125.85 -7.6294E-06 85 25 5 0 0 0 0.00031624 2 81622 54.471 48.812 1 1.0451 1.0396 0 8511000 4457200 4053800 10325 1070 3916 4025 16181;16182 16181 EYEIPSNLTPADVFFR 16 0 1 Unmodified _EYEIPSNLTPADVFFR_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 954.4758 2 949.470166 1896.92578 NaN NaN NaN 0.50977 0.00048402 NaN NaN NaN NaN 125.28 0.34498 125.28 125.08 125.43 7.6294E-06 0 0 0 0.002663 1 83408 59.198 37.206 1 NaN NaN 0 4752200 0 4752200 10326 1070 3916 4025 16183 16183 EYETLAMPEGSQAGR 15 0 1 Oxidation (M) _EYETLAM(ox)PEGSQAGR_ EYETLAM(1)PEGSQAGR EYETLAM(45.65)PEGSQAGR 0 1 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.8726 2 827.872501 1653.73045 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.053 1 42.053 41.553 42.553 0 0 0 0 0.0055637 1 22647 45.653 35.421 1 10327 247 3917 4026 16184 16184 187 EYFADMER 8 0 1 Oxidation (M) _EYFADM(ox)ER_ EYFADM(1)ER EYFADM(45.68)ER 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.725 2 538.721307 1075.42806 83943.63 0.64155 0.00034562 0.034088 1.8364E-05 0.67564 0.00036398 538.72121190074 543.725180136006 31.646 0.68207 31.646 31.284 31.966 0 183 64 4 0 0 0 0.021655 1 15504 45.68 42.288 1 0.68212 0.68083 0 16657000 8579000 8078200 10328 1679 3918 4027 16185 16185 1484 EYFADMER 8 0 1 Oxidation (M) _EYFADM(ox)ER_ EYFADM(1)ER EYFADM(55.53)ER 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.7244 2 538.721307 1075.42806 84387.45 0.54032 0.00029108 0.05186 2.7938E-05 0.59218 0.00031902 538.721247062732 543.725311146299 31.001 0.53444 31.001 30.742 31.276 0 159 46 5 0 0 0 0.012087 1 15208 55.531 51.174 1 0.66688 0.73062 0 31195000 16798000 14397000 10329 1679 3918 4027 16186 16186 1484 EYFADMK 7 1 0 Oxidation (M) _EYFADM(ox)K_ EYFADM(1)K EYFADM(63.31)K 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2037 2 460.196936 918.379319 87474.89 0.12911 5.9416E-05 0.17609 8.1036E-05 0.3052 0.00014045 460.1970764127 464.203898517717 27.005 0.81518 27.005 26.723 27.538 0 251 47 9 0 0 0 0.016395 1 12225 63.306 53.169 1 1.0434 1.2309 0 350220000 170460000 179760000 10330 1471 3919 4028 16187 16187 1197 EYFADMK 7 1 0 Oxidation (M) _EYFADM(ox)K_ EYFADM(1)K EYFADM(48.76)K 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.1966 2 460.196936 918.379319 88189.07 0.27608 0.00012705 0.20762 9.5547E-05 0.48371 0.0002226 460.196903829993 464.204021532652 26.594 0.43198 26.594 26.451 26.883 0 85 21 6 0 0 0 0.031265 1 12055 48.756 37.034 1 1.0087 1.1185 0 47730000 22999000 24731000 10331 1471 3919 4028 16188 16188 1197 EYFADMK 7 1 0 Oxidation (M) _EYFADM(ox)K_ EYFADM(1)K EYFADM(40.1)K 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.2042 2 460.196936 918.379319 88613.28 0.13085 6.0218E-05 0.26677 0.00012277 0.39762 0.00018298 460.196973494133 464.203986580962 30.007 0.94331 30.007 29.705 30.648 -1.9073E-06 290 64 7 0 0 0 0.044594 1 12295 40.103 35.705 1 0.92976 0.75491 0 27316000 14328000 12989000 10332 1471 3919 4028 16189 16189 1197 EYGFCIMDNHK 11 1 0 Oxidation (M) _EYGFCIM(ox)DNHK_ EYGFCIM(1)DNHK EYGFCIM(63.43)DNHK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.2968 2 715.297387 1428.58022 NaN NaN NaN -0.34898 -0.00024962 NaN NaN NaN NaN 47.719 0.11953 47.719 47.671 47.791 0 0 0 0 0.0020556 1 25962 63.426 60.314 1 NaN NaN 0 9501500 9501500 0 10333 1470 3920 4029 16190 16190 1185 EYGFCIMDNHK 11 1 0 Oxidation (M) _EYGFCIM(ox)DNHK_ EYGFCIM(1)DNHK EYGFCIM(111.06)DNHK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.3057 2 715.297387 1428.58022 72628.54 0.73252 0.00052397 0.075091 5.3713E-05 0.80761 0.00057768 715.297406509666 719.304619386079 46.416 0.28058 46.416 46.268 46.549 0 102 20 6 0 0 0 2.0584E-06 2 25638 111.06 109.25 1 1.2429 1.2715 0 31673000 13938000 17736000 10334 1470 3920 4029 16191;16192 16191 1185 EYGFCIMDNHK 11 1 0 Unmodified _EYGFCIMDNHK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 711.3082 2 707.29993 1412.58531 72297.53 0.78014 0.0005518 -0.33673 -0.00023817 0.44342 0.00031363 707.300077571683 711.307045296372 74.712 0.60724 74.712 74.381 74.988 0 212 42 9 0 0 0 0.027813 1 39569 37.508 34.369 1 1.7741 1.4223 0 8318500 2776500 5541900 10335 1470 3920 4030 16193 16193 EYGFCIMDNHK 11 1 0 Unmodified _EYGFCIMDNHK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 474.5404 3 471.869045 1412.58531 86853.34 0.32873 0.00015512 -0.6587 -0.00031082 -0.32997 -0.0001557 471.868891275396 474.540403459297 74.694 0.49534 74.694 74.425 74.921 0 188 34 8 0 0 0 0.010292 1 39627 37.144 36.2 1 1.9195 1.5226 0 4545300 1489500 3055800 10336 1470 3920 4030 16194 16194 EYGFCIMDNHK 11 1 0 Unmodified _EYGFCIMDNHK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.3074 2 707.29993 1412.58531 72254.42 0.46904 0.00033175 -0.4842 -0.00034247 -0.015159 -1.0722E-05 707.300086710633 711.307026945071 74.958 0.59181 74.958 74.626 75.218 0 189 36 8 0 0 0 0.025456 1 38896 42.718 36.413 1 1.6264 1.3269 0 6038300 2342000 3696300 10337 1470 3920 4030 16195 16195 EYGFCIMDNHK 11 1 0 Unmodified _EYGFCIMDNHK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 474.5403 3 471.869045 1412.58531 88293.72 0.20365 9.6098E-05 -0.68353 -0.00032254 -0.47988 -0.00022644 471.868859099164 474.540312061503 74.967 0.52584 74.967 74.692 75.218 0 162 32 7 0 0 0 0.06031 1 38963 19.641 19.207 1 1.8014 1.4155 0 3291200 1031500 2259700 10338 1470 3920 4030 16196 16196 EYGGLDVLVNNAGIAFK 17 1 0 Unmodified _EYGGLDVLVNNAGIAFK_ 0 0 0 E9PQ63;A8MTM1;P16152 E9PQ63 E9PQ63 CBR1 Carbonyl reductase [NADPH] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.9764 2 890.467426 1778.9203 NaN NaN NaN -0.69268 -0.00061681 NaN NaN NaN NaN 121.48 0.37298 121.48 121.32 121.7 0 0 0 0 0.00021022 1 80376 67.08 54.464 1 NaN NaN 0 5948700 0 5948700 10339 795 3921 4031 16197 16197 EYGMIYLGK 9 1 0 Oxidation (M) _EYGM(ox)IYLGK_ EYGM(1)IYLGK EYGM(46.43)IYLGK 0 1 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.2765 2 545.267893 1088.52123 84863.16 0.58109 0.00031685 0.38318 0.00020893 0.96426 0.00052578 545.268218352294 549.275388795225 60.802 0.41524 60.802 60.69 61.105 3.8147E-06 59 29 4 0 0 0 0.014063 1 34669 46.426 41.116 1 1.8152 1.8303 0 7101800 4013500 3088300 10340 618 3922 4032 16198 16198 471 EYGMIYLGK 9 1 0 Oxidation (M) _EYGM(ox)IYLGK_ EYGM(1)IYLGK EYGM(44.39)IYLGK 0 1 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.2757 2 545.267893 1088.52123 NaN NaN NaN 0.54677 0.00029814 NaN NaN NaN NaN 59.614 0.28262 59.614 59.457 59.739 -3.8147E-06 0 0 0 0.018115 1 34658 44.395 44.395 1 NaN NaN 0 6131200 0 6131200 10341 618 3922 4032 16199 16199 471 EYGQIESVR 9 0 1 Unmodified _EYGQIESVR_ 0 0 0 P42696 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.7703 2 540.769645 1079.52474 81610.23 0.7414 0.00040093 -0.20275 -0.00010964 0.53865 0.00029129 540.769526266452 545.773613112365 37.91 0.64986 37.91 37.549 38.199 0 226 54 6 0 0 0 0.0011206 2 19386 89.698 74.833 1 0.95654 1.0148 0 42006000 20276000 21730000 10342 1566 3923 4033 16200;16201 16201 EYGQIESVR 9 0 1 Unmodified _EYGQIESVR_ 0 0 0 P42696 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.7694 2 540.769645 1079.52474 82196.41 0.76697 0.00041475 0.28937 0.00015648 1.0563 0.00057123 540.769619660559 545.773915436949 36.974 0.58711 36.974 36.745 37.332 0 183 45 6 0 0 0 0.00028235 2 19057 103.56 86.178 1 0.93336 1.0802 0 67791000 39959000 27832000 10343 1566 3923 4033 16202;16203 16202 EYGQIESVR 9 0 1 Unmodified _EYGQIESVR_ 0 0 0 P42696 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.7745 2 540.769645 1079.52474 82432.59 0.58139 0.0003144 -0.076024 -4.1112E-05 0.50537 0.00027329 540.769466780107 545.773624963758 43.515 0.70936 43.515 43.194 43.903 3.8147E-06 199 48 7 0 0 0 0.016329 2 20461 53.968 45.846 1 0.94135 0.78077 0 11059000 5669200 5390000 10344 1566 3923 4033 16204;16205 16204 EYGQIESVR 9 0 1 Unmodified _EYGQIESVR_ 0 0 0 P42696 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.7699 2 540.769645 1079.52474 83054.91 0.46465 0.00025127 -0.056516 -3.0562E-05 0.40814 0.00022071 540.76947270613 545.773658832198 43.719 0.67905 43.719 43.425 44.104 0 195 44 7 0 0 0 0.014775 2 20036 55.37 41.651 1 1.0034 0.82059 0 9128500 4352200 4776300 10345 1566 3923 4033 16206;16207 16207 EYGYASLHK 9 1 0 Unmodified _EYGYASLHK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.2682 2 534.261456 1066.50836 83302.16 0.38576 0.0002061 -0.16837 -8.9951E-05 0.2174 0.00011615 534.260974797711 538.26837122877 27.866 0.25813 27.866 27.746 28.004 1.9073E-06 54 14 5 0 0 0 0.016543 1 13028 53.775 28.881 1 1.0468 1.0306 0 24114000 11585000 12529000 10346 1366 3924 4034 16208 16208 EYGYASLHK 9 1 0 Unmodified _EYGYASLHK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.2681 2 534.261456 1066.50836 83403.38 0.29307 0.00015658 -0.50786 -0.00027133 -0.21479 -0.00011475 534.26127360196 538.268217933537 31.896 0.29053 31.896 31.748 32.039 0 64 14 6 0 0 0 0.034216 1 13595 44.349 19.455 1 0.79441 0.62657 0 4071900 2079400 1992500 10347 1366 3924 4034 16209 16209 EYIPGQPPLSQSSDSSPTR 19 0 1 Unmodified _EYIPGQPPLSQSSDSSPTR_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1028.4978 2 1023.49236 2044.97016 NaN NaN NaN -0.068335 -6.9941E-05 NaN NaN NaN NaN 70.248 0.44402 70.248 70.027 70.471 0 0 0 0 0.00058607 2 40785 54.524 48.292 1 NaN NaN 0 4125000 0 4125000 10348 1454 3925 4035 16210;16211 16210 EYIPGQPPLSQSSDSSPTR 19 0 1 Unmodified _EYIPGQPPLSQSSDSSPTR_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1028.4949 2 1023.49236 2044.97016 NaN NaN NaN 0.027611 2.8259E-05 NaN NaN NaN NaN 69.214 0.41529 69.214 68.984 69.399 0 0 0 0 5.0796E-06 1 41103 67.964 54 1 NaN NaN 0 7336200 0 7336200 10349 1454 3925 4035 16212 16212 EYIPTVFDNYSAQSAVDGR 19 0 1 Unmodified _EYIPTVFDNYSAQSAVDGR_ 0 0 0 Q6ICQ8;P84095 Q6ICQ8 Q6ICQ8 ARHG;RHOG Rho-related GTP-binding protein RhoG ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1066.5004 2 1066.50018 2130.98581 NaN NaN NaN -0.45039 -0.00048034 NaN NaN NaN NaN 105.65 0.16878 105.65 105.57 105.74 7.6294E-06 0 0 0 0.035253 1 65536 42.209 37.131 1 NaN NaN 0 3596500 3596500 0 10350 1672 3926 4036 16213 16213 EYIPTVFDNYSAQSAVDGR 19 0 1 Unmodified _EYIPTVFDNYSAQSAVDGR_ 0 0 0 Q6ICQ8;P84095 Q6ICQ8 Q6ICQ8 ARHG;RHOG Rho-related GTP-binding protein RhoG MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1072.0059 2 1066.50018 2130.98581 59979.05 0.2161 0.00023047 0.38421 0.00040976 0.60032 0.00064024 1067.00223772054 1072.00586452923 116.72 0.34718 116.72 116.51 116.86 0 43 15 4 0 0 0 0.016721 1 67685 23.881 22.359 1 1.0036 0.87159 0 2650000 914440 1735600 10351 1672 3926 4036 16214 16214 EYIQILER 8 0 1 Unmodified _EYIQILER_ 0 0 0 P52948;H7C3P6 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.2975 2 532.292756 1062.57096 86077.36 0.55192 0.00029378 0.099917 5.3185E-05 0.65183 0.00034697 532.292515883033 537.296760431177 79.917 0.46862 79.917 79.666 80.134 0 108 39 5 0 0 0 0.0098174 2 47404 73.665 28.255 1 1.5255 1.5909 0 10532000 3903800 6628600 10352 1603 3927 4037 16215;16216 16215 EYIQILER 8 0 1 Unmodified _EYIQILER_ 0 0 0 P52948;H7C3P6 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.293 2 532.292756 1062.57096 NaN NaN NaN -0.19109 -0.00010171 NaN NaN NaN NaN 78.792 0.51194 78.792 78.56 79.072 0 0 0 0 0.034137 1 47858 61.999 11.873 1 NaN NaN 0 4876900 4876900 0 10353 1603 3927 4037 16217 16217 EYLDYDDTR 9 0 1 Unmodified _EYLDYDDTR_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.258 2 595.254025 1188.4935 80890.52 0.63463 0.00037777 0.17791 0.0001059 0.81254 0.00048367 595.254158703884 600.258222118096 47.216 0.65845 47.216 46.871 47.53 3.8147E-06 237 60 6 0 0 0 0.012314 2 25499 57.59 42.208 1 0.85876 0.87846 0 34990000 16256000 18734000 10354 2007 3928 4038 16218;16219 16219 EYLDYDDTR 9 0 1 Unmodified _EYLDYDDTR_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.2583 2 595.254025 1188.4935 80454.02 0.79816 0.00047511 0.075795 4.5118E-05 0.87396 0.00052023 595.253928853171 600.258121162085 46.17 0.60683 46.17 45.902 46.509 0 182 47 6 0 0 0 0.0021086 3 25421 76.679 50.785 1 0.875 0.95585 0 37676000 18317000 19360000 10355 2007 3928 4038 16220;16221;16222 16221 EYLDYDDTR 9 0 1 Unmodified _EYLDYDDTR_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 600.2583 2 595.254025 1188.4935 80219.71 0.59388 0.00035351 -0.20864 -0.0001242 0.38524 0.00022932 595.253678704981 600.257940383543 54.477 0.73297 54.477 54.187 54.92 0 222 50 7 0 0 0 0.057174 1 27079 36.334 36.334 1 0.90853 0.76103 0 4006700 1985200 2021500 10356 2007 3928 4038 16223 16223 EYLDYDDTR 9 0 1 Unmodified _EYLDYDDTR_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.2546 2 595.254025 1188.4935 80329.79 0.49103 0.00029229 -0.26424 -0.00015729 0.22678 0.00013499 595.253754707697 600.258054793003 55.106 0.86192 55.106 54.79 55.652 0 252 54 8 0 0 0 0.045082 1 27012 40.002 40.002 1 1.0563 0.89949 0 3169100 1614200 1554800 10357 2007 3928 4038 16224 16224 EYLGANWTLEK 11 1 0 Unmodified _EYLGANWTLEK_ 0 0 0 P57740;B3KMK0;H0YG15 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3391 2 662.33261 1322.65067 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.804 1 85.804 85.304 86.304 0 0 0 0 0.0068943 1 52861 62.823 26.489 1 10358 1621 3929 4039 16225 16225 EYLLDMIPPR 10 0 1 Oxidation (M) _EYLLDM(ox)IPPR_ EYLLDM(1)IPPR EYLLDM(46.16)IPPR 0 1 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A0U1RRM1;A0A024R7K7 A0A024R7K7 GATAD2B;GATAD2A Transcriptional repressor p66-beta;Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.8257 2 631.826106 1261.63766 80936.51 0.74652 0.00047167 -0.26669 -0.0001685 0.47984 0.00030317 632.327577186005 636.830115926986 93.344 0.85061 93.344 92.897 93.748 -7.6294E-06 139 76 4 0 0 0 0.010492 1 57950 46.158 46.158 1 0.94658 0.93668 0 12382000 6227200 6154600 10359 229;591 3930 4040 16226 16226 166 EYLPFLNTLK 10 1 0 Unmodified _EYLPFLNTLK_ 0 0 0 Q8N516;Q4LE38;O95163;F5H2T0;B3KXE7;B4E3I9;Q68DI5;B3KNB2 Q8N516 Q8N516 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3459 2 619.344989 1236.67542 78246.15 0.80848 0.00050073 -0.25326 -0.00015685 0.55522 0.00034387 619.344951658368 623.352084004681 116 0.49709 116 115.73 116.23 -7.6294E-06 81 28 4 0 0 0 0.00095588 2 73925 78.516 78.516 1 1.6627 1.672 0 4977200 1830800 3146400 10360 1419 3931 4041 16227;16228 16228 EYLPFLNTLK 10 1 0 Unmodified _EYLPFLNTLK_ 0 0 0 Q8N516;Q4LE38;O95163;F5H2T0;B3KXE7;B4E3I9;Q68DI5;B3KNB2 Q8N516 Q8N516 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.3524 2 619.344989 1236.67542 79104.97 0.61872 0.0003832 0.3058 0.0001894 0.92452 0.0005726 619.34538432617 623.352464208567 115.35 0.47201 115.35 115.15 115.62 0 81 29 4 0 0 0 0.0073167 1 75175 57.598 57.598 1 2.1875 2.192 0 6811800 2221700 4590100 10361 1419 3931 4041 16229 16229 EYLSEEVQAVHK 12 1 0 Unmodified _EYLSEEVQAVHK_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;B3KPG7;B3KMG1 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3674 2 716.359356 1430.70416 72112.75 0.71329 0.00051097 -0.38831 -0.00027817 0.32498 0.0002328 716.35929495244 720.867996552181 47.755 0.25229 47.755 47.598 47.85 -3.8147E-06 57 22 5 0 0 0 0.0024924 1 25986 96.342 87.648 1 0.67038 0.65814 0 23040000 11296000 11744000 10362 1119 3932 4042 16230 16230 EYLSEEVQAVHK 12 1 0 Unmodified _EYLSEEVQAVHK_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;B3KPG7;B3KMG1 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 716.3594 2 716.359356 1430.70416 74295.91 0.71381 0.00051135 -0.33476 -0.00023981 0.37905 0.00027153 716.358801789658 720.366189077097 55.482 0.41204 55.482 55.291 55.703 0 91 24 6 0 0 0 0.0097728 2 27819 49.35 49.35 1 0.75225 0.63281 0 2143300 1171500 971760 10363 1119 3932 4042 16231;16232 16232 EYLSEEVQAVHK 12 1 0 Unmodified _EYLSEEVQAVHK_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;B3KPG7;B3KMG1 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.3671 2 716.359356 1430.70416 71107.81 0.61343 0.00043944 -0.34284 -0.0002456 0.27059 0.00019384 716.358996225231 720.366241633772 55.901 0.40835 55.901 55.72 56.128 -3.8147E-06 102 28 6 0 0 0 0.015684 1 27483 42.718 42.241 1 0.69802 0.56823 0 1893100 935320 957830 10364 1119 3932 4042 16233 16233 EYLTGFHK 8 1 0 Unmodified _EYLTGFHK_ 0 0 0 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1;B3KQ09 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.7614 2 497.753267 993.491981 NaN NaN NaN 1.7293 0.00086075 NaN NaN NaN NaN 35.263 0.58059 35.263 34.988 35.569 0 0 0 0 0.038104 1 17933 54.611 37.054 1 NaN NaN 0 18156000 0 18156000 10365 80 3933 4043 16234 16234 EYLTTLGQR 9 0 1 Unmodified _EYLTTLGQR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.7925 2 540.787838 1079.56112 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.05 1 55.05 54.55 55.55 0 0 0 0 0.035184 1 30958 51.346 26.714 1 10366 122 3934 4044 16235 16235 EYNEDEDPAAR 11 0 1 Unmodified _EYNEDEDPAAR_ 0 0 0 Q9UK43;Q95HA6;B2R5Y4;Q13123;Q9Y3Z5;D6REL4;Q9H4P6;E7EQZ7;D6RCQ4;D6RAY9 Q9UK43 Q9UK43 CSA2;IK;DKFZp564B112 Protein Red MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.77 2 654.770571 1307.52659 75933.16 0.82155 0.00053793 -0.13668 -8.9492E-05 0.68487 0.00044843 654.770277608468 659.774688739282 21.672 0.3533 21.672 21.465 21.818 1.9073E-06 64 20 4 0 0 0 0.00026738 2 7880 89.886 89.886 1 1.162 1.2099 0 5254600 1921500 3333100 10367 838 3935 4045 16236;16237 16237 EYNEFAEVFLK 11 1 0 Unmodified _EYNEFAEVFLK_ 0 0 0 O95373 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.8492 2 694.840268 1387.66598 74287.16 1.0668 0.00074123 -0.15005 -0.00010426 0.91672 0.00063697 694.839689189563 698.847082727275 112.04 0.62736 112.04 111.76 112.38 0 146 47 5 0 0 0 0.0012874 2 72379 68.657 62.353 1 2.1625 2.1815 0 7863000 2312300 5550800 10368 1424 3936 4046 16238;16239 16238 EYNEFAEVFLK 11 1 0 Unmodified _EYNEFAEVFLK_ 0 0 0 O95373 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 695.3418 2 694.840268 1387.66598 73832.87 0.71208 0.00049478 0.42588 0.00029592 1.138 0.0007907 694.840639754978 698.847633033811 123.79 0.53777 123.79 123.56 124.1 0 75 22 5 0 0 0 0.05694 1 74010 33.744 29.727 1 1.4002 1.1784 0 1917300 776110 1141200 10369 1424 3936 4046 16240 16240 EYPDAQGFAADVR 13 0 1 Unmodified _EYPDAQGFAADVR_ 0 0 0 A0A024R8H6;Q15059;B4DS09;A0A140F1N4 A0A024R8H6 A0A024R8H6 BRD3 Bromodomain-containing protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.8323 2 719.833505 1437.65246 NaN NaN NaN 0.22061 0.00015881 NaN NaN NaN NaN 72.607 0.49002 72.607 72.402 72.892 0 0 0 0 0.0031456 2 42660 66.262 55.433 1 NaN NaN 0 7388400 7388400 0 10370 249 3937 4047 16241;16242 16242 EYPDAQGFAADVR 13 0 1 Unmodified _EYPDAQGFAADVR_ 0 0 0 A0A024R8H6;Q15059;B4DS09;A0A140F1N4 A0A024R8H6 A0A024R8H6 BRD3 Bromodomain-containing protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.8337 2 719.833505 1437.65246 NaN NaN NaN 0.44404 0.00031964 NaN NaN NaN NaN 71.632 0.30434 71.632 71.406 71.71 0 0 0 0 0.0023745 1 42904 69.979 59.15 1 NaN NaN 0 3909700 3909700 0 10371 249 3937 4047 16243 16243 EYPDAQGFAADVR 13 0 1 Unmodified _EYPDAQGFAADVR_ 0 0 0 A0A024R8H6;Q15059;B4DS09;A0A140F1N4 A0A024R8H6 A0A024R8H6 BRD3 Bromodomain-containing protein 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 719.8333 2 719.833505 1437.65246 NaN NaN NaN 0.69212 0.00049821 NaN NaN NaN NaN 83.179 0.43359 83.179 82.969 83.403 0 0 0 0 0.049584 1 45404 40.154 26.801 1 NaN NaN 0 1598600 1598600 0 10372 249 3937 4047 16244 16244 EYPFILDAFQR 11 0 1 Unmodified _EYPFILDAFQR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.8609 2 699.856252 1397.69795 72636.2 0.73452 0.00051406 -0.20404 -0.0001428 0.53047 0.00037126 699.856116111577 704.860055246967 121.05 0.56094 121.05 120.77 121.34 7.6294E-06 186 37 7 0 0 0 0.0017197 2 78015 65.347 65.347 1 0.86191 0.88942 0 24098000 12142000 11956000 10373 1563 3938 4048 16245;16246 16245 EYPFILDAFQR 11 0 1 Unmodified _EYPFILDAFQR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.8616 2 699.856252 1397.69795 72181.42 1.0434 0.00073023 -0.17429 -0.00012198 0.86911 0.00060825 699.856183932356 704.860155831478 120.55 0.52384 120.55 120.28 120.8 0 188 37 6 0 0 0 0.0017197 3 79519 65.347 65.347 1 0.89118 0.97223 0 29734000 15651000 14083000 10374 1563 3938 4048 16247;16248;16249 16247 EYPFILDAFQR 11 0 1 Unmodified _EYPFILDAFQR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.8605 2 699.856252 1397.69795 74181.11 1.1057 0.00077384 -0.34925 -0.00024442 0.75646 0.00052941 699.855989378335 704.859995312031 132.97 0.52011 132.97 132.71 133.23 0 163 24 9 0 0 0 0.0068404 2 80852 53.683 53.683 1 0.91984 0.7564 0 11889000 6030100 5859300 10375 1563 3938 4048 16250;16251 16250 EYPFILDAFQR 11 0 1 Unmodified _EYPFILDAFQR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.3577 2 699.856252 1397.69795 72743.14 1.1457 0.00080182 -0.24043 -0.00016827 0.90526 0.00063355 699.856126088602 704.859962793885 132.76 0.63266 132.76 132.46 133.09 0 161 28 10 0 0 0 0.0063276 2 79769 54.608 54.608 1 1.0974 0.887 0 11518000 5562600 5955500 10376 1563 3938 4048 16252;16253 16253 EYQAGDFEAAER 12 0 1 Unmodified _EYQAGDFEAAER_ 0 0 0 C9JZL3;Q9H5T3;B4DTL6;O15294 C9JZL3 C9JZL3 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3013 2 693.302038 1384.58952 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.249 1 46.249 45.749 46.749 0 0 0 0 0.012385 1 24955 55.718 31.199 1 10377 1034 3939 4049 16254 16254 EYQAGDFEAAER 12 0 1 Unmodified _EYQAGDFEAAER_ 0 0 0 C9JZL3;Q9H5T3;B4DTL6;O15294 C9JZL3 C9JZL3 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.3063 2 693.302038 1384.58952 77321.55 0.58238 0.00040377 -0.33551 -0.00023261 0.24688 0.00017116 693.802760121503 698.306148372661 45.27 0.40467 45.27 45.062 45.467 0 82 34 5 0 0 0 0.0001724 1 24822 91.549 72.455 1 1.2692 1.2823 0 9956000 4259800 5696200 10378 1034 3939 4049 16255 16255 EYQDAFLFNELK 12 1 0 Unmodified _EYQDAFLFNELK_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.8763 2 758.869556 1515.72456 70567.91 0.9737 0.00073891 -0.11776 -8.9365E-05 0.85594 0.00064954 759.371140351219 762.876157139128 111.76 0.79595 111.76 111.34 112.13 0 300 57 6 0 0 0 0.00019951 2 70149 78.655 72.415 1 0.77763 0.83951 0 37044000 21223000 15821000 10379 2120 3940 4050 16256;16257 16256 EYQDAFLFNELK 12 1 0 Unmodified _EYQDAFLFNELK_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.3716 2 758.869556 1515.72456 71116.34 0.65417 0.00049643 -0.060751 -4.6102E-05 0.59342 0.00045033 758.869611808072 762.876261337396 111.08 0.78101 111.08 110.74 111.52 0 311 56 7 0 0 0 4.62E-05 2 71445 98.943 91.814 1 0.76844 0.783 0 30840000 17501000 13339000 10380 2120 3940 4050 16258;16259 16259 EYQDAFLFNELK 12 1 0 Unmodified _EYQDAFLFNELK_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.3719 2 758.869556 1515.72456 70873.06 0.96621 0.00073322 0.22817 0.00017315 1.1944 0.00090638 758.869579635338 762.876563840904 122.64 0.77774 122.64 122.32 123.1 0 196 37 9 0 0 0 0.00019323 2 72136 77.379 71.138 1 1.2116 0.97351 0 16170000 7535200 8634800 10381 2120 3940 4050 16260;16261 16261 EYQDLLNVK 9 1 0 Unmodified _EYQDLLNVK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;Q5RLN2;B4DE66;Q59EM6;B4DR43;Q8TCR7;B3KXJ0;B3KQI5;E7EMV2;B4DJT7;E7ESP9;A5YM63;Q16352;P07196;P07197 V9HWE1 V9HWE1 HEL113;VIM;tmp_locus_29;DES;DKFZp761K0922;NEFM;INA;NEFL Vimentin;Desmin;Alpha-internexin;Neurofilament light polypeptide;Neurofilament medium polypeptide MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.2967 2 561.295496 1120.57644 79579.46 0.7791 0.0004373 0.44492 0.00024973 1.224 0.00068703 561.296262923868 565.302637202727 75.269 1.9202 75.269 74.092 76.012 -7.6294E-06 616 160 7 0 0 0 2.1239E-05 2 44074 117.16 94.668 1 1.4134 1.6386 0 239270000 95063000 144210000 10382 1457 3941 4051 16262;16263 16263 EYQDLLNVK 9 1 0 Unmodified _EYQDLLNVK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;Q5RLN2;B4DE66;Q59EM6;B4DR43;Q8TCR7;B3KXJ0;B3KQI5;E7EMV2;B4DJT7;E7ESP9;A5YM63;Q16352;P07196;P07197 V9HWE1 V9HWE1 HEL113;VIM;tmp_locus_29;DES;DKFZp761K0922;NEFM;INA;NEFL Vimentin;Desmin;Alpha-internexin;Neurofilament light polypeptide;Neurofilament medium polypeptide MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.3024 2 561.295496 1120.57644 79150.3 0.62409 0.0003503 0.5899 0.00033111 1.214 0.00068141 561.296083114621 565.302803348885 74.09 1.4704 74.09 73.406 74.876 0 555 126 7 0 0 0 0.00012949 4 44417 109.01 91.647 1 1.4699 1.7194 0 295350000 121850000 173500000 10383 1457 3941 4051 16264;16265;16266;16267 16266 EYQDLLNVK 9 1 0 Unmodified _EYQDLLNVK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;Q5RLN2;B4DE66;Q59EM6;B4DR43;Q8TCR7;B3KXJ0;B3KQI5;E7EMV2;B4DJT7;E7ESP9;A5YM63;Q16352;P07196;P07197 V9HWE1 V9HWE1 HEL113;VIM;tmp_locus_29;DES;DKFZp761K0922;NEFM;INA;NEFL Vimentin;Desmin;Alpha-internexin;Neurofilament light polypeptide;Neurofilament medium polypeptide MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.3021 2 561.295496 1120.57644 79182.2 0.56141 0.00031512 0.80001 0.00044904 1.3614 0.00076416 561.297416290759 565.302673547099 85.632 1.2587 85.632 85.027 86.286 0 360 69 8 0 0 0 0.0062893 2 46778 64.567 55.353 1 2.8434 2.3402 0 39864000 13085000 26779000 10384 1457 3941 4051 16268;16269 16268 EYQDLLNVK 9 1 0 Unmodified _EYQDLLNVK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;Q5RLN2;B4DE66;Q59EM6;B4DR43;Q8TCR7;B3KXJ0;B3KQI5;E7EMV2;B4DJT7;E7ESP9;A5YM63;Q16352;P07196;P07197 V9HWE1 V9HWE1 HEL113;VIM;tmp_locus_29;DES;DKFZp761K0922;NEFM;INA;NEFL Vimentin;Desmin;Alpha-internexin;Neurofilament light polypeptide;Neurofilament medium polypeptide MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.2968 2 561.295496 1120.57644 79142.11 0.59143 0.00033196 1.042 0.00058488 1.6334 0.00091684 561.297716727775 565.302778972145 85.834 1.2139 85.834 85.13 86.344 0 359 62 9 0 0 0 0.0021719 2 46208 75.854 66.64 1 2.8074 2.322 0 32767000 10044000 22724000 10385 1457 3941 4051 16270;16271 16271 EYQELMNIK 9 1 0 Oxidation (M) _EYQELM(ox)NIK_ EYQELM(1)NIK EYQELM(55.9)NIK 0 1 0 CON__O95678;O95678 CON__O95678 CON__O95678 KRT75 Keratin, type II cytoskeletal 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.2866 2 592.286814 1182.55907 77514.88 0.24045 0.00014241 -0.81798 -0.00048448 -0.57754 -0.00034207 592.286795369529 596.294609042977 21.963 0.63374 21.963 21.779 22.412 0 121 28 10 0 0 0 0.0068723 2 7956 55.902 36.265 1 0.69109 0.77792 0 121590000 73866000 47726000 + 10386 1147 3942 4052 16272;16273 16272 853 EYQELMNVK 9 1 0 Oxidation (M) _EYQELM(ox)NVK_ EYQELM(1)NVK EYQELM(96.25)NVK 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;Q8IWY7;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P05787;CON__Q8BGZ7;B2R853;CON__P04259 CON__P05787 KRT8;KRT6C;KRT6A Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.2861 2 585.278989 1168.54342 78652.05 0.76328 0.00044673 -0.64159 -0.00037551 0.12169 7.1222E-05 585.278784910274 589.28592973133 35.8 0.50866 35.8 35.478 35.986 0 221 48 7 0 0 0 0.00031609 1 17934 96.253 87.039 1 1.4812 1.673 0 81497000 33486000 48011000 + 10387 1156;859;1154;1180 3943 4053 16274 16274 669 EYQELMNVK 9 1 0 Oxidation (M) _EYQELM(ox)NVK_ EYQELM(1)NVK EYQELM(97.09)NVK 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;Q8IWY7;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P05787;CON__Q8BGZ7;B2R853;CON__P04259 CON__P05787 KRT8;KRT6C;KRT6A Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.2794 2 585.278989 1168.54342 78293.56 0.79162 0.00046332 -0.37018 -0.00021666 0.42144 0.00024666 585.278901888789 589.285955438194 36.121 0.55485 36.121 35.929 36.484 0 251 52 6 0 0 0 0.00028701 1 18164 97.093 85.325 1 1.5603 1.7004 0 49678000 20415000 29262000 + 10388 1156;859;1154;1180 3943 4053 16275 16275 669 EYQELMNVK 9 1 0 Oxidation (M) _EYQELM(ox)NVK_ EYQELM(1)NVK EYQELM(98.3)NVK 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;Q8IWY7;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P05787;CON__Q8BGZ7;B2R853;CON__P04259 CON__P05787 KRT8;KRT6C;KRT6A Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.2864 2 585.278989 1168.54342 79067.39 1.0805 0.00063239 -0.2922 -0.00017102 0.7883 0.00046138 585.278827056263 589.285987147959 35.02 1.0691 35.02 34.666 35.735 0 399 95 6 0 0 0 0.00024528 3 17622 98.299 88.711 1 1.5322 1.7288 0 63727000 23162000 40566000 + 10389 1156;859;1154;1180 3943 4053 16276;16277;16278 16276 669 EYQELMNVK 9 1 0 Oxidation (M) _EYQELM(ox)NVK_ EYQELM(1)NVK EYQELM(77.28)NVK 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;Q8IWY7;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P05787;CON__Q8BGZ7;B2R853;CON__P04259 CON__P05787 KRT8;KRT6C;KRT6A Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.2859 2 585.278989 1168.54342 76959.54 0.40404 0.00023648 -0.020549 -1.2027E-05 0.38349 0.00022445 585.278960518784 589.286105595961 41.101 0.39783 41.101 40.896 41.294 3.8147E-06 128 28 6 0 0 0 0.0009991 2 19049 77.282 71.801 1 0.83403 0.65974 0 5068000 3003500 2064500 + 10390 1156;859;1154;1180 3943 4053 16279;16280 16280 669 EYQELMNVK 9 1 0 Oxidation (M) _EYQELM(ox)NVK_ EYQELM(1)NVK EYQELM(48.56)NVK 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;Q8IWY7;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P05787;CON__Q8BGZ7;B2R853;CON__P04259 CON__P05787 KRT8;KRT6C;KRT6A Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.2791 2 585.278989 1168.54342 80559.53 0.19917 0.00011657 -0.02195 -1.2847E-05 0.17722 0.00010372 585.279085919858 589.286027414285 41.72 0.60815 41.72 41.446 42.054 0 172 45 5 0 0 0 0.011477 1 18789 48.561 43.253 1 0.75106 0.60793 0 2966200 1581700 1384500 + 10391 1156;859;1154;1180 3943 4053 16281 16281 669 EYQELMNVK 9 1 0 Unmodified _EYQELMNVK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;Q8IWY7;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P05787;CON__Q8BGZ7;B2R853;CON__P04259 CON__P05787 KRT8;KRT6C;KRT6A Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.2896 2 577.281531 1152.54851 80825.82 0.45184 0.00026084 0.2143 0.00012371 0.66614 0.00038455 577.281361467673 581.288717583292 58.742 0.51303 58.742 58.46 58.973 -3.8147E-06 156 42 5 0 0 0 0.00080518 1 33331 94.114 67.152 1 0.75034 0.78003 0 12442000 7710300 4731600 + 10392 1156;859;1154;1180 3943 4054 16282 16282 EYQELMNVK 9 1 0 Unmodified _EYQELMNVK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;Q8IWY7;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P05787;CON__Q8BGZ7;B2R853;CON__P04259 CON__P05787 KRT8;KRT6C;KRT6A Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.2884 2 577.281531 1152.54851 81406.55 0.65444 0.00037779 0.31764 0.00018337 0.97207 0.00056116 577.281638500299 581.288770947339 57.729 0.43338 57.729 57.51 57.944 0 106 34 5 0 0 0 0.00030602 2 33445 102.72 65.698 1 0.74217 0.76743 0 18529000 11359000 7170100 + 10393 1156;859;1154;1180 3943 4054 16283;16284 16283 EYQELMNVK 9 1 0 Unmodified _EYQELMNVK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;Q8IWY7;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P05787;CON__Q8BGZ7;B2R853;CON__P04259 CON__P05787 KRT8;KRT6C;KRT6A Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.2884 2 577.281531 1152.54851 78980.52 0.43662 0.00025205 0.1824 0.00010529 0.61901 0.00035735 577.281553166079 581.288739840433 68.299 0.60953 68.299 67.969 68.579 0 182 43 6 0 0 0 0.0020795 2 35578 77.058 43.121 1 1.307 1.0493 0 8006800 3536300 4470500 + 10394 1156;859;1154;1180 3943 4054 16285;16286 16285 EYQELMNVK 9 1 0 Unmodified _EYQELMNVK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;Q8IWY7;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__P05787;CON__Q8BGZ7;B2R853;CON__P04259 CON__P05787 KRT8;KRT6C;KRT6A Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.2894 2 577.281531 1152.54851 79715.84 0.37615 0.00021714 0.3335 0.00019252 0.70964 0.00040966 577.28163005576 581.288773556391 68.75 0.57527 68.75 68.505 69.08 0 179 40 6 0 0 0 0.016119 2 35079 54.157 32.026 1 1.3234 1.0796 0 6020800 2614500 3406300 + 10395 1156;859;1154;1180 3943 4054 16287;16288 16287 EYQELMSVK 9 1 0 Oxidation (M) _EYQELM(ox)SVK_ EYQELM(1)SVK EYQELM(92.44)SVK 0 1 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.7805 2 571.773539 1141.53253 NaN NaN NaN 0.33084 0.00018917 NaN NaN NaN NaN 37.072 0.56207 37.072 36.731 37.293 0 0 0 0 9.0795E-05 1 18760 92.439 36.763 1 NaN NaN 0 16242000 0 16242000 + 10396 1171;1158 3944 4055 16289 16289 872 EYQELMSVK 9 1 0 Oxidation (M) _EYQELM(ox)SVK_ EYQELM(1)SVK EYQELM(85.21)SVK 0 1 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.7819 2 571.773539 1141.53253 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.144 1 36.144 35.644 36.644 0 0 0 0 0.0010989 1 18529 85.212 30.662 1 + 10397 1171;1158 3944 4055 16290 16290 872 EYQELMSVK 9 1 0 Unmodified _EYQELMSVK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.7839 2 563.776082 1125.53761 NaN NaN NaN -2.069 -0.0011664 NaN NaN NaN NaN 69.815 0.31131 69.815 69.652 69.963 0 0 0 0 0.022342 1 35793 57.047 21.692 1 NaN NaN 0 1362900 0 1362900 + 10398 1171;1158 3944 4056 16291 16291 EYQEPEVPESNQK 13 1 0 Unmodified _EYQEPEVPESNQK_ 0 0 0 P33981 P33981 P33981 TTK Dual specificity protein kinase TTK MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.8677 2 788.859917 1575.70528 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.439 1 37.439 36.939 37.939 0 0 0 0 0.0044705 1 19059 60.342 43.711 1 10399 1539 3945 4057 16292 16292 EYQISAGDFPEVK 13 1 0 Unmodified _EYQISAGDFPEVK_ 0 0 0 A8K9B9;A0A024R9N6;Q9H223 A8K9B9 A8K9B9 EHD4 EH domain-containing protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.867 2 741.859189 1481.70382 NaN NaN NaN 0.17978 0.00013337 NaN NaN NaN NaN 88.588 0.36718 88.588 88.396 88.763 -7.6294E-06 0 0 0 0.020733 1 53320 47.559 30.927 1 NaN NaN 0 3679300 0 3679300 10400 284 3946 4058 16293 16293 EYQLVVQTTTEER 13 0 1 Unmodified _EYQLVVQTTTEER_ 0 0 0 A8K031;O14777 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.9058 2 798.399209 1594.78387 68155.96 0.96187 0.00076796 0.98117 0.00078336 1.943 0.0015513 798.398841397821 803.403198524656 67.977 0.53642 67.977 67.723 68.259 0 235 45 7 0 0 0 0.00014792 2 39295 88.596 88.596 1 0.65375 0.68182 0 21369000 11727000 9642000 10401 696 3947 4059 16294;16295 16295 EYQLVVQTTTEER 13 0 1 Unmodified _EYQLVVQTTTEER_ 0 0 0 A8K031;O14777 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.4039 2 798.399209 1594.78387 68217.26 0.50147 0.00040037 0.66763 0.00053303 1.1691 0.00093341 798.399662492872 803.40338413732 77.872 0.54077 77.872 77.625 78.166 0 191 34 7 0 0 0 0.00012298 2 41710 77.674 77.674 1 0.8601 0.73871 0 6378600 3412300 2966400 10402 696 3947 4059 16296;16297 16297 EYQLVVQTTTEER 13 0 1 Unmodified _EYQLVVQTTTEER_ 0 0 0 A8K031;O14777 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.4039 2 798.399209 1594.78387 68368.97 0.61559 0.00049149 0.26666 0.0002129 0.88226 0.00070439 798.399308125496 803.403303801746 78.231 0.55536 78.231 77.968 78.523 0 197 35 8 0 0 0 0.00011524 2 41076 75.739 73.082 1 0.92502 0.76748 0 5671600 3254000 2417600 10403 696 3947 4059 16298;16299 16298 EYQTQLIQR 9 0 1 Unmodified _EYQTQLIQR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.8165 2 589.811845 1177.60914 NaN NaN NaN 0.063954 3.7721E-05 NaN NaN NaN NaN 44.65 0.42046 44.65 44.494 44.915 0 0 0 0 0.0085392 1 23984 67.981 41.019 1 NaN NaN 0 4698600 0 4698600 10404 1729 3948 4060 16300 16300 EYQTQLIQR 9 0 1 Unmodified _EYQTQLIQR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.8111 2 589.811845 1177.60914 78727.9 0.34179 0.00020159 0.23473 0.00013845 0.57652 0.00034004 589.811297029616 594.816250624923 52.126 0.28174 52.126 51.968 52.25 0 56 18 5 0 0 0 0.016566 1 25180 53.754 43.489 1 0.99384 0.85533 0 1686100 824430 861680 10405 1729 3948 4060 16301 16301 EYSLDTR 7 0 1 Unmodified _EYSLDTR_ 0 0 0 H0YN81;Q9GZS3;H0YMF9;H0YL19;H3BQA8 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.2128 2 442.211432 882.408311 93814.92 0.41003 0.00018132 0.29427 0.00013013 0.7043 0.00031145 442.211596210825 447.215665038734 30.289 0.30184 30.289 30.136 30.438 -1.9073E-06 92 25 5 0 0 0 0.027367 1 14791 73.637 14.95 1 1.7571 1.7989 0 26199000 8748600 17450000 10406 1299 3949 4061 16302 16302 EYSSELNAPSQESDSHPR 18 0 1 Unmodified _EYSSELNAPSQESDSHPR_ 0 0 0 P49756;E9PQU5 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.6335 3 678.299607 2031.87699 75562.09 0.49909 0.00033853 0.011056 7.499E-06 0.51015 0.00034603 678.633819386751 681.635906279269 30.799 0.32139 30.799 30.618 30.94 1.9073E-06 115 28 6 0 0 0 1.1526E-05 3 15086 61.87 61.87 1 1.0121 1.0555 0 13334000 6634500 6699900 10407 1587 3950 4062 16303;16304;16305 16305 EYSSELNAPSQESDSHPR 18 0 1 Unmodified _EYSSELNAPSQESDSHPR_ 0 0 0 P49756;E9PQU5 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.9703 3 678.299607 2031.87699 73743.05 0.45875 0.00031117 0.343 0.00023266 0.80175 0.00054383 678.299719628751 681.635933383626 30.065 0.28112 30.065 29.93 30.211 0 114 24 6 0 0 0 2.4544E-06 1 14623 81.51 81.51 1 1.2053 1.1929 0 15409000 6493300 8915600 10408 1587 3950 4062 16306 16306 EYTAAVEAK 9 1 0 Unmodified _EYTAAVEAK_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6;U3KPZ5 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2552 2 491.248015 980.481476 86318.89 0.19448 9.5538E-05 -0.02097 -1.0302E-05 0.17351 8.5236E-05 491.248148229179 495.25505342781 25.462 0.48806 25.462 25.187 25.675 -1.9073E-06 115 25 8 0 0 0 0.0016671 2 11030 82.426 56.852 1 1.3856 1.56 0 73386000 27844000 45542000 10409 1328 3951 4063 16307;16308 16307 EYTAAVEAK 9 1 0 Unmodified _EYTAAVEAK_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6;U3KPZ5 J3KPX7 J3KPX7 PHB2 Prohibitin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2554 2 491.248015 980.481476 NaN NaN NaN -0.082287 -4.0423E-05 NaN NaN NaN NaN 25.202 0.35537 25.202 25.062 25.417 1.9073E-06 0 0 0 0.0076479 1 10848 69.812 47.961 1 NaN NaN 0 39334000 0 39334000 10410 1328 3951 4063 16309 16309 EYTDVYPEIIER 12 0 1 Unmodified _EYTDVYPEIIER_ 0 0 0 Q5H909;A0A024R9Y7;Q9UNF1;Q5H907;B4DX55;B4DWM5;A0A024R254;Q9Y5V3 Q5H909 Q5H909 MAGED2;MAGED1 Melanoma-associated antigen D2;Melanoma-associated antigen D1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.8726 2 763.872296 1525.73004 NaN NaN NaN -0.93244 -0.00071227 NaN NaN NaN NaN 92.181 0.38709 92.181 91.98 92.367 7.6294E-06 0 0 0 0.0042605 1 55779 64.297 44.511 1 NaN NaN 0 5023100 5023100 0 10411 292 3952 4064 16310 16310 EYTDVYPEIIER 12 0 1 Unmodified _EYTDVYPEIIER_ 0 0 0 Q5H909;A0A024R9Y7;Q9UNF1;Q5H907;B4DX55;B4DWM5;A0A024R254;Q9Y5V3 Q5H909 Q5H909 MAGED2;MAGED1 Melanoma-associated antigen D2;Melanoma-associated antigen D1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.8777 2 763.872296 1525.73004 NaN NaN NaN 0.87258 0.00066654 NaN NaN NaN NaN 92.144 0.48949 92.144 91.97 92.459 0 0 0 0 3.1006E-08 2 55847 109.42 102.53 1 NaN NaN 0 8996000 0 8996000 10412 292 3952 4064 16311;16312 16311 EYTDVYPEIIER 12 0 1 Unmodified _EYTDVYPEIIER_ 0 0 0 Q5H909;A0A024R9Y7;Q9UNF1;Q5H907;B4DX55;B4DWM5;A0A024R254;Q9Y5V3 Q5H909 Q5H909 MAGED2;MAGED1 Melanoma-associated antigen D2;Melanoma-associated antigen D1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.8786 2 763.872296 1525.73004 69858.4 0.61841 0.00047239 0.11967 9.1414E-05 0.73808 0.0005638 764.373505062819 768.87695198801 91.6 0.54369 91.6 91.23 91.773 0 128 47 4 0 0 0 0.0050534 1 56514 51.927 51.927 1 1.2724 1.335 0 22891000 10396000 12494000 10413 292 3952 4064 16313 16313 EYTINIHK 8 1 0 Unmodified _EYTINIHK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.2718 2 509.271824 1016.5291 83876.34 0.60299 0.00030708 -0.2797 -0.00014244 0.32329 0.00016464 509.271673939047 513.278596877471 36.206 0.98829 36.206 35.743 36.731 0 568 94 8 0 0 0 0.0038078 1 18175 95.62 67.198 1 0.81178 0.9683 0 714490000 416010000 298480000 10414 825 3953 4065 16314 16314 EYTINIHK 8 1 0 Unmodified _EYTINIHK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1017.5374 1 1017.53637 1016.5291 59352.48 0.45368 0.00046164 -0.014858 -1.5118E-05 0.43882 0.00044652 1017.53616458977 1025.55052979931 36.184 0.27856 36.184 36.015 36.294 0 35 25 3 0 0 0 0.025665 1 18320 67.981 16.194 1 0.72102 0.74672 0 14747000 5577400 9170000 10415 825 3953 4065 16315 16315 EYTINIHK 8 1 0 Unmodified _EYTINIHK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2718 2 509.271824 1016.5291 83767.83 0.66378 0.00033805 -0.26203 -0.00013344 0.40175 0.0002046 509.271761952297 513.2786183936 35.085 1.2422 35.085 34.657 35.899 0 491 108 8 0 0 0 6.5982E-06 2 17755 147.69 98.104 1 0.79753 0.94128 0 940960000 531610000 409360000 10416 825 3953 4065 16316;16317 16317 EYTINIHK 8 1 0 Unmodified _EYTINIHK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.2715 2 509.271824 1016.5291 84385.58 0.30135 0.00015347 -0.22257 -0.00011335 0.078785 4.0123E-05 509.271816817852 513.278805118492 41.115 1.9537 41.115 40.556 42.51 0 616 157 11 0 0 0 0.0090389 2 18962 76.035 54.753 1 0.83243 0.7289 0 194530000 103640000 90884000 10417 825 3953 4065 16318;16319 16319 EYTINIHK 8 1 0 Unmodified _EYTINIHK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.2718 2 509.271824 1016.5291 84493.81 0.13189 6.717E-05 0.052707 2.6842E-05 0.1846 9.4012E-05 509.271935461443 513.278866800486 41.141 1.9571 41.141 40.742 42.699 0 679 149 10 0 0 0 0.0026205 3 18435 99.375 56.461 1 0.83469 0.71683 0 147780000 73980000 73795000 10418 825 3953 4065 16320;16321;16322 16321 EYTLDVYR 8 0 1 Unmodified _EYTLDVYR_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.7607 2 529.761289 1057.50803 84797.25 0.50214 0.00026601 1.0402 0.00055106 1.5423 0.00081707 529.761371208719 534.76589706964 78.015 0.58839 78.015 77.656 78.244 0 93 37 4 0 0 0 0.061251 1 41004 39.646 29.232 1 2.0039 1.745 0 1802800 681710 1121100 10419 567 3954 4066 16323 16323 EYTPFPPPQPESQIDK 16 1 0 Unmodified _EYTPFPPPQPESQIDK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 937.4597 2 936.954349 1871.89414 62723.75 0.89741 0.00084084 -0.27266 -0.00025547 0.62476 0.00058537 937.45548443712 940.961218031645 84.338 0.70009 84.338 84.049 84.749 7.6294E-06 316 54 8 0 0 0 3.8065E-06 2 50451 88.021 88.021 1 0.98189 1.1008 0 65228000 35605000 29623000 10420 1717 3955 4067 16324;16325 16325 EYTPFPPPQPESQIDK 16 1 0 Unmodified _EYTPFPPPQPESQIDK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 937.4586 2 936.954349 1871.89414 63111.38 0.85861 0.00080447 -0.1554 -0.00014561 0.7032 0.00065887 937.455338087386 941.463496726411 83.534 0.84152 83.534 83.115 83.957 0 410 66 8 0 0 0 2.6233E-06 2 51033 91.784 91.784 1 0.98847 1.1112 0 56169000 26340000 29829000 10421 1717 3955 4067 16326;16327 16327 EYTPFPPPQPESQIDK 16 1 0 Unmodified _EYTPFPPPQPESQIDK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 940.9615 2 936.954349 1871.89414 62555.32 0.85696 0.00080293 -0.24793 -0.0002323 0.60903 0.00057063 936.953990073651 940.961136151511 96.478 1.0688 96.478 96.072 97.141 0 393 61 8 0 0 0 0.027501 1 53989 25.014 25.014 1 1.1983 0.95777 0 20411000 8513700 11898000 10422 1717 3955 4067 16328 16328 EYVCQLCEK 9 1 0 Unmodified _EYVCQLCEK_ 0 0 0 O96028;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.7711 2 614.770474 1227.52639 79324.5 0.75868 0.00046641 -0.17334 -0.00010656 0.58534 0.00035985 614.770398560988 618.777558242257 38.329 0.47486 38.329 38.116 38.591 0 118 39 4 0 0 0 0.0036023 2 19642 71.379 55.23 1 0.75433 0.79836 0 15648000 7612300 8035800 10423 1435 3956 4068 16329;16330 16330 EYVCQLCEK 9 1 0 Unmodified _EYVCQLCEK_ 0 0 0 O96028;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.7709 2 614.770474 1227.52639 78014.13 0.28063 0.00017252 0.11655 7.1653E-05 0.39718 0.00024418 614.770574071665 618.777847407289 37.401 0.46307 37.401 37.183 37.646 0 136 38 5 0 0 0 0.0018606 2 19407 79.906 65.24 1 0.67061 0.67969 0 26496000 14518000 11978000 10424 1435 3956 4068 16331;16332 16332 EYVCQLCEK 9 1 0 Unmodified _EYVCQLCEK_ 0 0 0 O96028;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.7711 2 614.770474 1227.52639 78324.85 0.41833 0.00025718 -0.0084151 -5.1733E-06 0.40992 0.000252 614.770593715138 618.777681796791 43.953 0.6286 43.953 43.676 44.305 0 200 42 7 0 0 0 0.003784 2 20767 70.919 59.768 1 1.7067 1.345 0 5602900 1945800 3657200 10425 1435 3956 4068 16333;16334 16334 EYVCQLCEK 9 1 0 Unmodified _EYVCQLCEK_ 0 0 0 O96028;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.7708 2 614.770474 1227.52639 76857.11 0.51449 0.00031629 -0.32797 -0.00020162 0.18652 0.00011467 614.770484131132 618.777519072918 44.149 0.56889 44.149 43.894 44.463 0 172 35 7 0 0 0 0.0013917 2 20350 86.011 74.859 1 1.6669 1.3605 0 5687300 2123400 3563900 10426 1435 3956 4068 16335;16336 16336 EYVGIVR 7 0 1 Unmodified _EYVGIVR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.2376 2 418.237253 834.459953 NaN NaN NaN 0.79322 0.00033175 NaN NaN NaN NaN 46.896 0.41111 46.896 46.551 46.962 0 0 0 0 0.031091 1 25353 69.234 46.611 1 NaN NaN 0 50444000 50444000 0 10427 1398 3957 4069 16337 16337 EYVGIVR 7 0 1 Unmodified _EYVGIVR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.2375 2 418.237253 834.459953 92711.6 0.19688 8.2344E-05 0.20036 8.38E-05 0.39725 0.00016614 418.237229076623 423.241578278602 45.925 1.057 45.925 45.492 46.549 3.8147E-06 240 87 7 0 0 0 0.033063 1 25238 64.547 38.068 1 0.46089 0.52967 0 77278000 59471000 17807000 10428 1398 3957 4069 16338 16338 EYVGIVR 7 0 1 Unmodified _EYVGIVR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 418.2375 2 418.237253 834.459953 93215.23 -0.4783 -0.00020004 0.9014 0.000377 0.4231 0.00017695 418.237500009252 423.241653413561 53.819 1.0632 53.819 53.486 54.549 0 259 78 6 0 0 0 0.054294 1 26157 53.098 35.536 1 0.64901 0.53606 0 8158900 5199700 2959300 10429 1398 3957 4069 16339 16339 EYVTCHTCR 9 0 1 Unmodified _EYVTCHTCR_ 0 0 0 Q6IBR8;B5BU01;P20042;Q96I16 Q6IBR8 Q6IBR8 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.262 2 613.258065 1224.50158 77602.8 0.76933 0.0004718 -0.23626 -0.00014489 0.53308 0.00032691 613.257974255523 618.26215752961 16.441 0.28193 16.441 16.322 16.604 0 44 13 6 0 0 0 0.008633 1 3804 60.91 55.751 1 1.0761 1.115 0 5846000 2748000 3098100 10430 1073 3958 4070 16340 16340 EYWNDPELDEGER 13 0 1 Unmodified _EYWNDPELDEGER_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.353 2 826.347174 1650.67979 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.913 1 73.913 73.413 74.413 0 0 0 0 0.0044447 1 43356 60.434 55.335 1 10431 1916 3959 4071 16341 16341 EYWNDPELDEGER 13 0 1 Unmodified _EYWNDPELDEGER_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.3527 2 826.347174 1650.67979 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.781 1 72.781 72.281 73.281 0 0 0 0 0.0029928 1 43676 65.574 61.72 1 10432 1916 3959 4071 16342 16342 EYWNDPELDEGER 13 0 1 Unmodified _EYWNDPELDEGER_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 826.8479 2 826.347174 1650.67979 68548.04 0.65023 0.00053732 -0.094274 -7.7903E-05 0.55596 0.00045941 826.848512988748 831.35119559613 84.189 0.52039 84.189 83.96 84.48 0 155 42 5 0 0 0 0.0066862 1 45897 45.915 45.01 1 1.4855 1.2419 0 3586600 1382300 2204300 10433 1916 3959 4071 16343 16343 FAAATGATPIAGR 13 0 1 Unmodified _FAAATGATPIAGR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3275 2 602.327662 1202.64077 77968.34 0.44576 0.00026849 0.68906 0.00041504 1.1348 0.00068353 602.327753437903 607.332657767531 50.865 1.0229 50.865 50.525 51.548 -3.8147E-06 513 95 8 0 0 0 1.4632E-18 1 27977 137.98 120.11 1 1.5917 1.8837 0 339740000 134280000 205450000 10434 119 3960 4072 16344 16344 FAAATGATPIAGR 13 0 1 Unmodified _FAAATGATPIAGR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.3336 2 602.327662 1202.64077 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.595 1 50.595 50.095 51.095 -3.8147E-06 0 0 0 1.302E-10 1 27931 114.45 76.162 1 10435 119 3960 4072 16345 16345 FAAATGATPIAGR 13 0 1 Unmodified _FAAATGATPIAGR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.3284 2 602.327662 1202.64077 78196.47 0.85649 0.00051589 0.34406 0.00020723 1.2005 0.00072312 602.327669751509 607.332308258902 49.921 1.0262 49.921 49.396 50.422 0 525 88 8 0 0 0 1.8317E-06 2 27939 110.39 99.319 1 1.7166 1.997 0 403500000 158740000 244770000 10436 119 3960 4072 16346;16347 16347 FAAATGATPIAGR 13 0 1 Unmodified _FAAATGATPIAGR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.3326 2 602.327662 1202.64077 80219.3 0.48929 0.00029471 0.04199 2.5292E-05 0.53128 0.00032 602.327657100883 607.332117559485 58.462 0.7342 58.462 58.165 58.899 -3.8147E-06 289 57 8 0 0 0 0.0010174 2 29615 59.542 57.008 1 1.5224 1.2409 0 15205000 5919400 9285600 10437 119 3960 4072 16348;16349 16348 FAAATGATPIAGR 13 0 1 Unmodified _FAAATGATPIAGR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.8117 2 602.327662 1202.64077 78404.62 0.47328 0.00028507 0.037932 2.2848E-05 0.51121 0.00030792 602.327579031163 607.332275800106 58.936 0.74834 58.936 58.678 59.426 -3.8147E-06 286 60 9 0 0 0 0.050327 1 29261 48.284 43.319 1 1.5118 1.2801 0 18395000 7137600 11257000 10438 119 3960 4072 16350 16350 FAAFFGNVPIFHIPGR 16 0 1 Unmodified _FAAFFGNVPIFHIPGR_ 0 0 0 A8K6G9;Q92620;B4DM30;B4DET0;J3KTG2 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.3198 3 597.322742 1788.9464 NaN NaN NaN -3.1879 -0.0019042 NaN NaN NaN NaN 126.58 0.14665 126.58 126.46 126.6 0 0 0 0 0.053559 1 82390 24.191 17.309 1 NaN NaN 0 1044700 1044700 0 10439 760 3961 4073 16351 16351 FAAFFGNVPIFHIPGR 16 0 1 Unmodified _FAAFFGNVPIFHIPGR_ 0 0 0 A8K6G9;Q92620;B4DM30;B4DET0;J3KTG2 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.6578 3 597.322742 1788.9464 80377.27 1.0496 0.00062696 -0.10824 -6.4653E-05 0.94137 0.0005623 597.656965618252 600.658715093149 126.05 0.70074 126.05 125.8 126.5 0 73 44 4 0 0 0 0.00023273 1 84050 48.112 48.112 1 1.2525 1.3069 0 4369200 2006900 2362200 10440 760 3961 4073 16352 16352 FAAHLIAGAPSEGSGALKPELSR 23 1 1 Unmodified _FAAHLIAGAPSEGSGALKPELSR_ 0 0 1 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.81 4 570.559021 2278.20698 78254.49 0.36597 0.00020881 -0.15595 -8.8977E-05 0.21003 0.00011983 570.8095008446 575.064653999061 90.02 0.59837 90.02 89.783 90.381 0 273 43 12 0 0 0 0.021962 2 49802 16.593 13.54 1 1.2857 1.1143 0 16193000 7660400 8533000 10441 780 3962 4074 16353;16354 16354 FAAHLIAGAPSEGSGALKPELSR 23 1 1 Unmodified _FAAHLIAGAPSEGSGALKPELSR_ 0 0 1 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.0645 4 570.559021 2278.20698 78947.85 0.25797 0.00014719 -0.012436 -7.0957E-06 0.24554 0.00014009 570.809565833461 575.315440047018 89.656 0.73361 89.656 89.348 90.081 0 294 46 11 0 0 0 0.043798 2 48627 9.8124 5.1537 1 1.2478 1.0563 0 12724000 6213500 6510800 10442 780 3962 4074 16355;16356 16355 FAAHLIAGAPSEGSGALKPELSR 23 1 1 Unmodified _FAAHLIAGAPSEGSGALKPELSR_ 0 0 1 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 760.7441 3 760.409603 2278.20698 70305.02 0.45634 0.000347 0.19117 0.00014537 0.64751 0.00049237 760.743631303291 766.751462199792 89.606 0.4821 89.606 89.415 89.897 0 141 29 7 0 0 0 0.04583 1 48720 14.944 11.705 1 1.0753 0.91894 0 2836500 1300600 1535800 10443 780 3962 4074 16357 16357 FAALDNEEEDKEEEIIK 17 2 0 Unmodified _FAALDNEEEDKEEEIIK_ 0 0 1 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.6566 3 674.656509 2020.9477 73855.16 0.64757 0.00043688 -0.05584 -3.7673E-05 0.59173 0.00039921 674.990731544498 679.999164244494 74.1 0.61662 74.1 73.855 74.472 0 294 52 8 0 0 0 2.4029E-09 2 43458 103.5 103.5 1 0.6707 0.79182 0 51793000 32345000 19448000 10444 1926 3963 4075 16358;16359 16359 FAALDNEEEDKEEEIIK 17 2 0 Unmodified _FAALDNEEEDKEEEIIK_ 0 0 1 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.9912 3 674.656509 2020.9477 73871.23 0.74215 0.00050069 -0.14899 -0.00010051 0.59316 0.00040018 674.99073598237 680.333706061234 72.86 0.67361 72.86 72.633 73.307 7.6294E-06 208 55 6 0 0 0 0.00031767 1 43652 46.121 42.153 1 0.56892 0.65838 0 44339000 28480000 15858000 10445 1926 3963 4075 16360 16360 FAALDNEEEDKEEEIIK 17 2 0 Unmodified _FAALDNEEEDKEEEIIK_ 0 0 1 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.991 3 674.656509 2020.9477 74316.97 0.54732 0.00036925 -0.41849 -0.00028234 0.12883 8.6919E-05 674.990684038653 679.999313744508 84.84 0.69347 84.84 84.598 85.291 0 208 48 6 0 0 0 0.0061111 1 46333 29.687 29.687 1 0.54574 0.46631 0 13233000 6978600 6254400 10446 1926 3963 4075 16361 16361 FAALDNEEEDKEEEIIK 17 2 0 Unmodified _FAALDNEEEDKEEEIIK_ 0 0 1 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.6573 3 674.656509 2020.9477 73247.27 0.68386 0.00046137 -0.34278 -0.00023126 0.34108 0.00023011 674.656359764023 679.999145300558 84.959 0.98783 84.959 84.685 85.673 0 264 65 9 0 0 0 0.0066977 2 45576 28.869 28.869 1 0.63407 0.53569 0 10737000 6653100 4084200 10447 1926 3963 4075 16362;16363 16362 FAALITVLALAEK 13 1 0 Unmodified _FAALITVLALAEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.4234 2 680.415946 1358.81734 NaN NaN NaN -0.24353 -0.0001657 NaN NaN NaN NaN 133.52 0.32153 133.52 133.32 133.64 0 0 0 0 0.00037217 1 87474 85.958 67.178 1 NaN NaN 0 12918000 0 12918000 10448 897 3964 4076 16364 16364 FAALITVLALAEK 13 1 0 Unmodified _FAALITVLALAEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.4236 2 680.415946 1358.81734 NaN NaN NaN -0.1122 -7.6341E-05 NaN NaN NaN NaN 133.46 0.49956 133.46 133.13 133.63 0 0 0 0 1.6987E-05 1 89645 93.258 69.938 1 NaN NaN 0 7120000 0 7120000 10449 897 3964 4076 16365 16365 FAANINK 7 1 0 Unmodified _FAANINK_ 0 0 0 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85;C9JQM9;H7C278 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.2234 2 389.216321 776.418088 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.403 1 26.403 25.903 26.903 0 0 0 0 0.053226 1 11828 65.263 23.139 1 10450 610 3965 4077 16366 16366 FAAQNLHQNLIR 12 0 1 Unmodified _FAAQNLHQNLIR_ 0 0 0 E9PC05;Q9H0C8 E9PC05 E9PC05 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.9327 3 475.596753 1423.76843 NaN NaN NaN 0.77594 0.00036903 NaN NaN NaN NaN 53.837 0.10944 53.837 53.792 53.901 0 0 0 0 0.0034693 1 30792 54.343 40.163 1 NaN NaN 0 2878300 0 2878300 10451 1230 3966 4078 16367 16367 FACHSASLTVR 11 0 1 Unmodified _FACHSASLTVR_ 0 0 0 A8K525;A0A0S2Z4Z9;Q15233;C9IZL7;C9JYS8 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.8763 3 416.87664 1247.60809 98597.53 0.22122 9.2223E-05 0.082089 3.4221E-05 0.30331 0.00012644 416.876556690821 420.21319083794 33.056 0.42278 33.056 32.873 33.296 0 166 42 5 0 0 0 0.015404 1 16454 27.681 24.002 1 1.2724 1.2997 0 31141000 12739000 18402000 10452 573 3967 4079 16368 16368 FACHSASLTVR 11 0 1 Unmodified _FACHSASLTVR_ 0 0 0 A8K525;A0A0S2Z4Z9;Q15233;C9IZL7;C9JYS8 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.8172 2 624.811322 1247.60809 NaN NaN NaN 1.294 0.00080849 NaN NaN NaN NaN 33.019 0.38572 33.019 32.851 33.237 0 0 0 0 0.0024828 1 16400 74.165 39.778 1 NaN NaN 0 9738800 0 9738800 10453 573 3967 4079 16369 16369 FACHSASLTVR 11 0 1 Unmodified _FACHSASLTVR_ 0 0 0 A8K525;A0A0S2Z4Z9;Q15233;C9IZL7;C9JYS8 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.8154 2 624.811322 1247.60809 77760.82 0.66352 0.00041458 -0.18125 -0.00011325 0.48227 0.00030133 624.811170364715 629.815459190554 31.971 0.2861 31.971 31.813 32.099 0 72 25 4 0 0 0 0.00042951 2 15850 79.16 70.028 1 1.1778 1.172 0 16363000 5679900 10683000 10454 573 3967 4079 16370;16371 16370 FADDTYTESYISTIGVDFK 19 1 0 Unmodified _FADDTYTESYISTIGVDFK_ 0 0 0 E9PLD0;Q9H0U4;B7Z8M7;Q5U0I6;P62820;Q9H1C9 E9PLD0 E9PLD0 RAB1B;RAB1A Ras-related protein Rab-1B;Ras-related protein Rab-1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1091.0143 2 1086.5046 2170.99465 58203.5 0.81794 0.0008887 -0.47243 -0.0005133 0.34551 0.00037539 1087.00555998377 1091.01248384791 118.51 0.53339 118.51 118.26 118.8 0 146 30 7 0 0 0 6.1246E-12 1 76069 103.85 99.991 1 1.4811 1.5317 0 11098000 5584000 5514400 10455 1246 3968 4080 16372 16372 FADDTYTESYISTIGVDFK 19 1 0 Unmodified _FADDTYTESYISTIGVDFK_ 0 0 0 E9PLD0;Q9H0U4;B7Z8M7;Q5U0I6;P62820;Q9H1C9 E9PLD0 E9PLD0 RAB1B;RAB1A Ras-related protein Rab-1B;Ras-related protein Rab-1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1086.5056 2 1086.5046 2170.99465 58074.91 0.36048 0.00039166 0.29371 0.00031912 0.65419 0.00071078 1087.00636999232 1091.01311282314 118.14 0.59077 118.14 117.79 118.38 7.6294E-06 152 39 7 0 0 0 2.4399E-08 2 77633 95.264 95.264 1 1.5104 1.5077 0 14322000 6176400 8145200 10456 1246 3968 4080 16373;16374 16373 FADDTYTESYISTIGVDFK 19 1 0 Unmodified _FADDTYTESYISTIGVDFK_ 0 0 0 E9PLD0;Q9H0U4;B7Z8M7;Q5U0I6;P62820;Q9H1C9 E9PLD0 E9PLD0 RAB1B;RAB1A Ras-related protein Rab-1B;Ras-related protein Rab-1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1091.0142 2 1086.5046 2170.99465 NaN NaN NaN -0.42975 -0.00046692 NaN NaN NaN NaN 130.38 0.43054 130.38 130.2 130.63 0 0 0 0 0.00011595 1 78080 64.244 61.116 1 NaN NaN 0 1723200 0 1723200 10457 1246 3968 4080 16375 16375 FADFTVYR 8 0 1 Unmodified _FADFTVYR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.7577 2 509.753267 1017.49198 85390.69 0.28892 0.00014728 -1.3038 -0.00066462 -1.0149 -0.00051734 509.751850973144 514.757321942761 77.169 1.0089 77.169 76.556 77.565 0 270 78 5 0 0 0 0.0058564 1 46531 89.142 63.248 1 0.83041 0.89119 0 25389000 13580000 11810000 10458 2080 3969 4081 16376 16376 FADGEVVR 8 0 1 Unmodified _FADGEVVR_ 0 0 0 Q14739;A0A024R3R5;C9JXK0;C9JES9;B4E0Z3 Q14739 Q14739 LBR Lamin-B receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.7296 2 446.729792 891.445031 91705.23 0.091294 4.0784E-05 -0.25581 -0.00011428 -0.16452 -7.3494E-05 446.72979098915 451.733463529753 33.868 0.76416 33.868 33.58 34.345 0 186 57 6 0 0 0 0.028279 1 16957 53.351 29.379 1 1.544 1.6888 0 34565000 13302000 21263000 10459 1743 3970 4082 16377 16377 FADIGNTVK 9 1 0 Unmodified _FADIGNTVK_ 0 0 0 A8K5J1;P11172;B5LY71;B5LY70;B5LY64;E9PFD2;B5LY67 A8K5J1 A8K5J1 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase;Orotidine 5-phosphate decarboxylase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.759 2 482.758549 963.502546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.992 1 45.992 45.492 46.492 0 0 0 0 0.0055262 1 25310 67.993 26.49 1 10460 749 3971 4083 16378 16378 FADLSEAANR 10 0 1 Unmodified _FADLSEAANR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.2711 2 547.26727 1092.51999 80884.38 0.96848 0.00053002 0.76599 0.0004192 1.7345 0.00094922 547.267561556419 552.271841451053 44.393 0.98244 44.393 43.984 44.966 0 497 88 9 0 0 0 0.0029629 2 23575 78.264 46.329 1 1.467 1.7357 0 317050000 121130000 195920000 10461 1457 3972 4084 16379;16380 16379 FADLSEAANR 10 0 1 Unmodified _FADLSEAANR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.2709 2 547.26727 1092.51999 81397.27 1.4068 0.00076991 0.797 0.00043617 2.2038 0.0012061 547.267520797182 552.271905900885 43.712 0.94218 43.712 43.36 44.303 3.8147E-06 369 78 8 0 0 0 4.8926E-08 2 23619 116.05 67.489 1 1.5365 1.7984 0 660620000 264680000 395940000 10462 1457 3972 4084 16381;16382 16381 FADLSEAANR 10 0 1 Unmodified _FADLSEAANR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.2718 2 547.26727 1092.51999 81349.05 0.22452 0.00012287 0.29122 0.00015937 0.51574 0.00028225 547.267499283742 552.271499574064 51.167 1.1325 51.167 50.752 51.885 0 365 80 9 0 0 0 0.00041053 2 25105 87.308 37.938 1 3.4022 2.9041 0 37710000 8338200 29372000 10463 1457 3972 4084 16383;16384 16383 FADLSEAANR 10 0 1 Unmodified _FADLSEAANR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 552.2713 2 547.26727 1092.51999 80481.41 0.2977 0.00016292 0.36642 0.00020053 0.66412 0.00036345 547.267639422273 552.271523257515 51.597 1.2619 51.597 51.141 52.403 0 395 91 9 0 0 0 0.00037423 2 24696 88.37 43.288 1 3.4655 3.023 0 29557000 6483100 23074000 10464 1457 3972 4084 16385;16386 16385 FAEALGSTEAK 11 1 0 Unmodified _FAEALGSTEAK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.3115 2 562.285128 1122.5557 82223.82 0.80404 0.0004521 -1.014 -0.00057017 -0.20998 -0.00011807 562.284312937684 566.291887638122 39.552 0.37952 39.552 39.369 39.749 0 156 31 7 0 0 0 0.041294 1 20928 57.174 51.253 1 1.0075 1.1371 0 65554000 34281000 31273000 10465 789 3973 4085 16387 16387 FAEALGSTEAK 11 1 0 Unmodified _FAEALGSTEAK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.2858 2 562.285128 1122.5557 81094.29 0.42129 0.00023688 0.41803 0.00023505 0.83932 0.00047194 562.285178748575 566.292587875425 46.29 0.51007 46.29 46.071 46.581 0 150 35 6 0 0 0 0.0075017 1 22212 52.49 49.208 1 1.1001 0.87878 0 2914300 1430900 1483400 10466 789 3973 4085 16388 16388 FAEALGSTEAK 11 1 0 Unmodified _FAEALGSTEAK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.2925 2 562.285128 1122.5557 NaN NaN NaN 0.49682 0.00027935 NaN NaN NaN NaN 46.316 0.5153 46.316 46.094 46.61 0 0 0 0 0.024652 1 21737 51.762 41.775 1 NaN NaN 0 1255000 0 1255000 10467 789 3973 4085 16389 16389 FAEDNFNNTYISTIGIDFK 19 1 0 Unmodified _FAEDNFNNTYISTIGIDFK_ 0 0 0 A0A024RB27;Q504R6;P51153;D3DV69 A0A024RB27 A0A024RB27 hCG_24991;RAB13;hCG_1996054 Ras-related protein Rab-13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1106.0288 2 1105.02603 2208.03751 58428.95 0.48102 0.00053154 0.16865 0.00018636 0.64967 0.00071791 1106.02898425412 1109.03290874387 120.7 0.43402 120.7 120.53 120.97 0 95 31 5 0 0 0 0.010443 1 77822 25.718 25.718 1 1.3744 1.386 0 7091000 2885100 4205900 10468 322 3974 4086 16390 16390 FAEEFYSFR 9 0 1 Unmodified _FAEEFYSFR_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.2752 2 598.274564 1194.53457 NaN NaN NaN 1.2299 0.00073582 NaN NaN NaN NaN 90.74 0.5551 90.74 90.444 91 7.6294E-06 0 0 0 0.04166 1 54769 49.715 35.712 1 NaN NaN 0 6647300 6647300 0 10469 295 3975 4087 16391 16391 FAEEFYSFR 9 0 1 Unmodified _FAEEFYSFR_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.2756 2 598.274564 1194.53457 NaN NaN NaN 0.40371 0.00024153 NaN NaN NaN NaN 89.804 0.4856 89.804 89.418 89.903 0 0 0 0 0.0076946 1 55428 69.716 45.76 1 NaN NaN 0 8541600 8541600 0 10470 295 3975 4087 16392 16392 FAEEFYSFR 9 0 1 Unmodified _FAEEFYSFR_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.2747 2 598.274564 1194.53457 80554.88 0.53289 0.00031882 1.1577 0.00069263 1.6906 0.0010114 598.274907785347 603.279489477342 103.19 0.40199 103.19 103.01 103.41 0 88 25 5 0 0 0 0.025193 1 58648 47.96 45.688 1 0.98869 0.842 0 2829000 1674600 1154300 10471 295 3975 4087 16393 16393 FAEEQLLK 8 1 0 Unmodified _FAEEQLLK_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.276 2 489.26875 976.522947 87269.07 -0.017811 -8.7142E-06 0.43759 0.0002141 0.41978 0.00020539 489.268985120866 493.275955520534 64.994 0.99481 64.994 64.462 65.457 0 421 90 6 0 0 0 0.013762 1 37163 64.567 29.743 1 1.1131 1.1993 0 41067000 18558000 22508000 10472 1820 3976 4088 16394 16394 FAEEQLLK 8 1 0 Unmodified _FAEEQLLK_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.2762 2 489.26875 976.522947 87661.38 0.27145 0.00013281 0.50637 0.00024775 0.77782 0.00038056 489.268930177334 493.276150204551 63.731 1.1325 63.731 63.235 64.368 0 464 100 7 0 0 0 0.022432 1 37279 57.177 26.992 1 1.0828 1.2034 0 50511000 26191000 24319000 10473 1820 3976 4088 16395 16395 FAEEQLLK 8 1 0 Unmodified _FAEEQLLK_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.2761 2 489.26875 976.522947 87168.73 0.31341 0.00015334 0.65559 0.00032076 0.969 0.0004741 489.268872078262 493.276197343163 74.724 1.7313 74.724 74.223 75.954 0 452 123 7 0 0 0 0.041092 1 39482 46.994 16.809 1 2.1321 1.6605 0 12317000 4045000 8272300 10474 1820 3976 4088 16396 16396 FAEEQLLK 8 1 0 Unmodified _FAEEQLLK_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.269 2 489.26875 976.522947 87241.75 0.13308 6.5112E-05 0.89478 0.00043779 1.0279 0.0005029 489.268843582816 493.276383916415 75.071 1.6435 75.071 74.519 76.162 0 432 111 6 0 0 0 0.017037 2 38953 60.709 34.882 1 2.156 1.7763 0 10675000 3320300 7354400 10475 1820 3976 4088 16397;16398 16398 FAELETILGDIDR 13 0 1 Unmodified _FAELETILGDIDR_ 0 0 0 Q69YP1;Q5JY65;Q9BZJ0 Q69YP1 Q69YP1 DKFZp762M013;CRNKL1 Crooked neck-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.3884 2 746.388113 1490.76167 73411.96 0.9228 0.00068876 0.14456 0.0001079 1.0674 0.00079666 746.387761395811 751.392306158182 124.35 0.35869 124.35 124.15 124.5 0 74 22 6 0 0 0 9.9151E-09 2 82673 115.18 102.22 1 0.91028 0.91445 0 6661600 3820500 2841100 10476 1810 3977 4089 16399;16400 16400 FAEVTQEVEVARPVDK 16 1 1 Unmodified _FAEVTQEVEVARPVDK_ 0 0 1 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.3209 3 606.319502 1815.93668 76547.87 0.48028 0.00029121 0.23359 0.00014163 0.71388 0.00043284 606.319587249623 612.661573955281 67.377 0.68365 67.377 67.148 67.831 0 233 58 6 0 0 0 0.001428 1 38894 38.093 38.093 1 0.7665 0.90451 0 36294000 21930000 14363000 10477 1312 3978 4090 16401 16401 FAEVTQEVEVARPVDK 16 1 1 Unmodified _FAEVTQEVEVARPVDK_ 0 0 1 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.3192 3 606.319502 1815.93668 78308.5 0.4839 0.0002934 -0.14907 -9.0382E-05 0.33483 0.00020301 606.319473189851 612.661255729299 66.222 0.65267 66.222 65.95 66.602 0 221 53 5 0 0 0 6.0808E-05 1 39038 76.85 76.85 1 0.76107 0.87883 0 30578000 15804000 14773000 10478 1312 3978 4090 16402 16402 FAEVTQEVEVARPVDK 16 1 1 Unmodified _FAEVTQEVEVARPVDK_ 0 0 1 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.6539 3 606.319502 1815.93668 78485.71 0.31928 0.00019359 0.45356 0.000275 0.77284 0.00046859 606.320412547833 612.661369760113 77.259 0.8501 77.259 76.841 77.691 0 217 57 6 0 0 0 6.9746E-05 1 41330 62.646 62.646 1 1.127 0.93351 0 5675200 3179400 2495700 10479 1312 3978 4090 16403 16403 FAEVTQEVEVARPVDK 16 1 1 Unmodified _FAEVTQEVEVARPVDK_ 0 0 1 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.3279 3 606.319502 1815.93668 NaN NaN NaN -3.7655 -0.0022831 NaN NaN NaN NaN 77.653 0.88348 77.653 77.256 78.139 0 0 0 0 0.0018834 1 40611 61.962 50.194 1 NaN NaN 0 2799300 0 2799300 10480 1312 3978 4090 16404 16404 FAEYGEIK 8 1 0 Unmodified _FAEYGEIK_ 0 0 0 A0A023T787;Q9Y5S9;A0A0J9YW13 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.7471 2 478.739825 955.465098 87955.95 0.15427 7.3854E-05 0.034739 1.6631E-05 0.18901 9.0485E-05 478.739750113451 482.746940791386 46.173 0.78706 46.173 45.8 46.587 0 215 68 5 0 0 0 0.013558 1 24832 65.038 58.999 1 1.8567 1.9973 0 38616000 12317000 26298000 10481 4 3979 4091 16405 16405 FAEYGEIK 8 1 0 Unmodified _FAEYGEIK_ 0 0 0 A0A023T787;Q9Y5S9;A0A0J9YW13 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.7466 2 478.739825 955.465098 89106.4 0.085239 4.0807E-05 0.1181 5.6537E-05 0.20333 9.7344E-05 478.739837890083 482.746906865842 45.26 0.77023 45.26 44.741 45.511 0 249 63 7 0 0 0 0.0090807 1 24727 75.854 64.133 1 2.1037 2.3363 0 49542000 16488000 33054000 10482 4 3979 4091 16406 16406 FAEYGEIK 8 1 0 Unmodified _FAEYGEIK_ 0 0 0 A0A023T787;Q9Y5S9;A0A0J9YW13 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 482.746 2 478.739825 955.465098 92525.16 0.15866 7.5958E-05 -0.22053 -0.00010557 -0.061864 -2.9617E-05 478.739816941119 482.746652213927 53.353 0.53978 53.353 53.084 53.624 0 120 39 5 0 0 0 0.04808 1 26450 44.447 40.513 1 1.6167 1.3511 0 1279300 513490 765790 10483 4 3979 4091 16407 16407 FAEYGEIK 8 1 0 Unmodified _FAEYGEIK_ 0 0 0 A0A023T787;Q9Y5S9;A0A0J9YW13 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.7471 2 478.739825 955.465098 93136.55 0.18068 8.6501E-05 -0.13272 -6.354E-05 0.047962 2.2961E-05 478.739876251106 482.746770855862 53.712 0.55522 53.712 53.438 53.993 0 114 39 4 0 0 0 0.04634 1 26077 45.081 41.147 1 1.5499 1.366 0 1222500 598730 623790 10484 4 3979 4091 16408 16408 FAGASIK 7 1 0 Unmodified _FAGASIK_ 0 0 0 O00425;B4DKT5;F8W930;Q9Y6M1 O00425;F8W930 O00425 IGF2BP3;IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 351.2073 2 347.200139 692.385725 104477.3 -0.24983 -8.6741E-05 0.1972 6.8467E-05 -0.052632 -1.8274E-05 347.200096705324 351.207222870762 27.504 0.34773 27.504 27.34 27.688 -1.9073E-06 49 17 4 0 0 0 0.041494 1 12786 58.981 30.343 1 1.4591 1.5578 0 20983000 7804100 13179000 10485 1364;1267 3980 4092 16409 16409 FAGGDYTTTIEAFISASGR 19 0 1 Unmodified _FAGGDYTTTIEAFISASGR_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 987.4777 2 982.473437 1962.93232 65145.32 0.54135 0.00053187 0.57157 0.00056155 1.1129 0.0010934 982.47399774601 987.478113152855 125.22 0.54469 125.22 124.99 125.54 0 127 35 7 0 0 0 9.0895E-05 1 81254 48.527 48.527 1 2.1918 2.2293 0 7278800 2750400 4528400 10486 1454 3981 4093 16410 16410 FAGGDYTTTIEAFISASGR 19 0 1 Unmodified _FAGGDYTTTIEAFISASGR_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 987.4772 2 982.473437 1962.93232 63954.38 0.80228 0.00078822 0.48794 0.00047939 1.2902 0.0012676 982.473126545609 987.979774060833 124.85 0.70351 124.85 124.62 125.33 7.6294E-06 145 49 6 0 0 0 8.2396E-05 1 83015 48.704 43.098 1 2.6452 2.64 0 8986000 2880000 6106100 10487 1454 3981 4093 16411 16411 FAGVDIR 7 0 1 Unmodified _FAGVDIR_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76;Q6IPX4;B4DP32 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.2158 2 389.216321 776.418088 94653.84 0.092553 3.6023E-05 0.14019 5.4563E-05 0.23274 9.0586E-05 389.21634999505 394.220376834022 55.698 1.3183 55.698 55.181 56.499 0 531 99 8 0 0 0 0.026909 2 32247 82.386 22.745 1 0.98845 1.1498 0 401160000 191070000 210090000 10488 1636 3982 4094 16412;16413 16413 FAHLLQPIR 9 0 1 Unmodified _FAHLLQPIR_ 0 0 0 A0A0A6YYG7;Q6IBW4;E5RJN3;E5RJL4;F8WAR3 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.5536 3 365.553826 1093.63965 98786.55 -0.11335 -4.1434E-05 -0.18705 -6.8379E-05 -0.3004 -0.00010981 365.553631613804 368.889813201267 67.016 0.93861 67.016 66.607 67.546 0 300 72 6 0 0 0 0.00077514 1 38579 74.127 74.127 1 0.90721 0.94014 0 22912000 11794000 11119000 10489 491 3983 4095 16414 16414 FAHLLQPIR 9 0 1 Unmodified _FAHLLQPIR_ 0 0 0 A0A0A6YYG7;Q6IBW4;E5RJN3;E5RJL4;F8WAR3 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 365.5538 3 365.553826 1093.63965 99081.65 0.12985 4.7465E-05 -0.17127 -6.2607E-05 -0.04142 -1.5141E-05 365.553720272623 368.889788473878 63.79 1.2642 63.79 63.135 64.399 0 350 111 4 0 0 0 0.00034371 2 37367 89.752 89.752 1 0.9216 1.0014 0 28421000 13789000 14632000 10490 491 3983 4095 16415;16416 16415 FAHLLQPIR 9 0 1 Unmodified _FAHLLQPIR_ 0 0 0 A0A0A6YYG7;Q6IBW4;E5RJN3;E5RJL4;F8WAR3 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 368.8901 3 365.553826 1093.63965 101898.2 0.16718 6.1115E-05 -0.14201 -5.1913E-05 0.025171 9.2015E-06 365.553673828411 368.889806288646 73.908 0.98042 73.908 73.33 74.31 0 228 71 5 0 0 0 0.055003 1 39086 22.086 22.086 1 1.8439 1.5529 0 3059700 1040500 2019200 10491 491 3983 4095 16417 16417 FAIGSQVSEHSIIK 14 1 0 Unmodified _FAIGSQVSEHSIIK_ 0 0 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B3KVF0 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.6152 3 505.943707 1514.80929 NaN NaN NaN -0.33496 -0.00016947 NaN NaN NaN NaN 72.128 0.38828 72.128 71.922 72.31 0 0 0 0 0.01441 1 43201 39.005 27.899 1 NaN NaN 0 16511000 0 16511000 10492 745 3984 4096 16418 16418 FAIYSAR 7 0 1 Unmodified _FAIYSAR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0;D2CPK4;D2CPK2 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.2243 2 414.224146 826.433738 95802.78 0.031561 1.3073E-05 0.21567 8.9336E-05 0.24723 0.00010241 414.224091359774 419.228352015836 52.401 0.59397 52.401 52.127 52.721 0 159 44 5 0 0 0 0.023524 1 29057 90.986 56.093 1 0.49596 0.53259 0 46820000 30222000 16598000 10493 118 3985 4097 16419 16419 FAIYSAR 7 0 1 Unmodified _FAIYSAR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0;D2CPK4;D2CPK2 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.2246 2 414.224146 826.433738 NaN NaN NaN 0.43758 0.00018126 NaN NaN NaN NaN 51.062 0.49628 51.062 50.782 51.278 0 0 0 0 0.00091924 1 28827 118.01 73.038 1 NaN NaN 0 17566000 17566000 0 10494 118 3985 4097 16420 16420 FALACNASDK 10 1 0 Unmodified _FALACNASDK_ 0 0 0 Q75MT5;B5BUD2;P35250;A0A087WVY3;H7C5P4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.7658 2 548.758223 1095.50189 NaN NaN NaN -0.062048 -3.4049E-05 NaN NaN NaN NaN 40.04 0.38245 40.04 39.796 40.178 0 0 0 0 0.0093157 1 20819 64.04 49.265 1 NaN NaN 0 5682700 0 5682700 10495 1079 3986 4098 16421 16421 FALACNASDK 10 1 0 Unmodified _FALACNASDK_ 0 0 0 Q75MT5;B5BUD2;P35250;A0A087WVY3;H7C5P4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.7657 2 548.758223 1095.50189 NaN NaN NaN -1.3111 -0.00071949 NaN NaN NaN NaN 39.144 0.34689 39.144 38.908 39.255 0 0 0 0 0.046832 1 20571 47.603 42.615 1 NaN NaN 0 8507000 0 8507000 10496 1079 3986 4098 16422 16422 FALENFTVSAAK 12 1 0 Unmodified _FALENFTVSAAK_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.3505 2 649.342978 1296.6714 75636.77 0.85057 0.00055231 0.23004 0.00014938 1.0806 0.00070169 649.342808203174 653.350236792217 110.19 0.57465 110.19 109.85 110.42 0 102 29 5 0 0 0 0.0002099 2 63568 80.763 54.249 1 1.1386 0.90156 0 4948800 2258600 2690200 10497 295 3987 4099 16423;16424 16423 FALENFTVSAAK 12 1 0 Unmodified _FALENFTVSAAK_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.3434 2 649.342978 1296.6714 75476.8 0.81594 0.00052982 0.27422 0.00017806 1.0902 0.00070789 649.342965407042 653.350318924493 110.01 0.61546 110.01 109.63 110.25 -7.6294E-06 108 31 5 0 0 0 0.00019108 1 62542 76.943 49.201 1 1.3124 1.066 0 4458000 1993700 2464300 10498 295 3987 4099 16425 16425 FALGIFAINEAVESGDVGK 19 1 0 Unmodified _FALGIFAINEAVESGDVGK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0;Q6P1N4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 973.0132 2 969.004373 1935.99419 NaN NaN NaN 0.27755 0.00026895 NaN NaN NaN NaN 128.18 0.33635 128.18 128.02 128.35 0 0 0 0 0.0013844 1 83565 51.774 38.346 1 NaN NaN 0 2092200 0 2092200 10499 352 3988 4100 16426 16426 FALGSVVAVTK 11 1 0 Unmodified _FALGSVVAVTK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.3265 2 546.326599 1090.63865 84846.76 0.83118 0.0004541 0.51583 0.00028181 1.347 0.00073591 546.326654291899 550.333937161083 93.773 0.76507 93.773 93.341 94.106 0 279 67 7 0 0 0 0.00026225 2 56867 90.108 81.195 1 0.83779 0.90447 0 34790000 19846000 14944000 10500 1676 3989 4101 16427;16428 16428 FALGSVVAVTK 11 1 0 Unmodified _FALGSVVAVTK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.3281 2 546.326599 1090.63865 84984.17 0.5893 0.00032195 0.6169 0.00033703 1.2062 0.00065898 546.326727182008 550.333982240985 92.766 0.74469 92.766 92.511 93.256 0 221 62 6 0 0 0 0.0004776 2 57525 75.387 55.249 1 0.81857 0.85192 0 33840000 17691000 16149000 10501 1676 3989 4101 16429;16430 16430 FALGSVVAVTK 11 1 0 Unmodified _FALGSVVAVTK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.3342 2 546.326599 1090.63865 84376.69 0.65497 0.00035783 0.51533 0.00028154 1.1703 0.00063937 546.326592978024 550.333878942948 107.22 0.61295 107.22 106.92 107.53 -7.6294E-06 152 38 6 0 0 0 0.028265 2 61276 39.785 35.672 1 1.1015 0.88489 0 7823500 3404400 4419200 10502 1676 3989 4101 16431;16432 16431 FALPSPQHILGLPVGQHIYLSAR 23 0 1 Unmodified _FALPSPQHILGLPVGQHIYLSAR_ 0 0 0 A0A024R4X0;P00387;B1AHF3 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.607 4 629.354951 2513.3907 78011.53 1.0017 0.00063043 -0.24305 -0.00015297 0.75866 0.00047747 629.605563467342 632.107613101371 126.65 0.64337 126.65 126.31 126.96 0 95 39 6 0 0 0 0.0057321 1 84476 26.477 26.477 1 0.78179 0.80298 0 4952400 2316400 2636000 10503 164 3990 4102 16433 16433 FALPSPQHILGLPVGQHIYLSAR 23 0 1 Unmodified _FALPSPQHILGLPVGQHIYLSAR_ 0 0 0 A0A024R4X0;P00387;B1AHF3 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.6062 4 629.354951 2513.3907 76425.85 0.84198 0.00052991 -0.020565 -1.2943E-05 0.82142 0.00051696 629.605582402315 631.856863853998 128.9 0.44304 128.9 128.72 129.16 0 147 20 10 0 0 0 2.1644E-08 1 77911 65.454 65.454 1 0.74611 0.62593 0 10049000 5936500 4112600 10504 164 3990 4102 16434 16434 FALTFGLDQLK 11 1 0 Unmodified _FALTFGLDQLK_ 0 0 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;B4DQ46 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2 Cohesin subunit SA-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8507 2 626.850438 1251.68632 78249.01 0.88684 0.00055592 0.012046 7.5511E-06 0.89889 0.00056347 626.850176139254 630.857410739175 119.5 0.45042 119.5 119.25 119.7 0 116 29 6 0 0 0 0.00047879 2 76848 75.294 0 1 0.79043 0.77775 0 8643000 5067100 3575900 10505 863 3991 4103 16435;16436 16436 FALTFGLDQLK 11 1 0 Unmodified _FALTFGLDQLK_ 0 0 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;B4DQ46 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2 Cohesin subunit SA-2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.3519 2 626.850438 1251.68632 NaN NaN NaN -0.5759 -0.000361 NaN NaN NaN NaN 117.76 0.27749 117.76 117.58 117.86 0 0 0 0 0.046279 1 75442 45.368 0 1 NaN NaN 0 1849500 1849500 0 10506 863 3991 4103 16437 16437 FALTFGLDQLK 11 1 0 Unmodified _FALTFGLDQLK_ 0 0 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;B4DQ46 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2 Cohesin subunit SA-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8515 2 626.850438 1251.68632 77715.42 0.65627 0.00041138 0.12156 7.62E-05 0.77783 0.00048758 626.850533536383 630.857374683536 118.95 0.54344 118.95 118.7 119.24 -7.6294E-06 123 35 5 0 0 0 3.8072E-05 2 78314 99.815 0 1 0.72906 0.75687 0 11210000 6412400 4797600 10507 863 3991 4103 16438;16439 16439 FALTFGLDQLK 11 1 0 Unmodified _FALTFGLDQLK_ 0 0 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;B4DQ46 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2 Cohesin subunit SA-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.8582 2 626.850438 1251.68632 77679.02 0.68189 0.00042744 0.39496 0.00024758 1.0768 0.00067502 626.85076005651 630.857741405811 131.61 0.37955 131.61 131.43 131.81 0 43 17 4 0 0 0 0.0068404 1 79937 53.683 0 1 1.7953 1.5432 0 1115600 402830 712800 10508 863 3991 4103 16440 16440 FALVAPVQAEEDSGNVNGK 19 1 0 Unmodified _FALVAPVQAEEDSGNVNGK_ 0 0 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 973.9512 2 972.986711 1943.95887 63323.18 0.84454 0.00082172 0.093625 9.1095E-05 0.93816 0.00091282 972.986582651779 977.495336530023 90.742 0.50885 90.742 90.533 91.042 0 122 41 6 0 0 0 0.0016796 2 54740 35.737 35.737 1 1.0469 1.0919 0 16793000 8579200 8213600 10509 1435 3992 4104 16441;16442 16441 FALVAPVQAEEDSGNVNGK 19 1 0 Unmodified _FALVAPVQAEEDSGNVNGK_ 0 0 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 972.9854 2 972.986711 1943.95887 64970.2 0.34395 0.00033466 0.02122 2.0647E-05 0.36517 0.0003553 973.488451427641 976.993674626955 89.852 0.41933 89.852 89.678 90.098 0 121 37 5 0 0 0 2.452E-05 2 55443 59.294 59.294 1 0.88885 0.92351 0 18909000 10293000 8616000 10510 1435 3992 4104 16443;16444 16444 FALVAPVQAEEDSGNVNGK 19 1 0 Unmodified _FALVAPVQAEEDSGNVNGK_ 0 0 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 977.4957 2 972.986711 1943.95887 62921.87 0.034479 3.3547E-05 0.37477 0.00036465 0.40925 0.0003982 973.488606907902 976.994446352211 103.7 0.71384 103.7 103.34 104.06 7.6294E-06 156 45 5 0 0 0 0.00469 1 59070 32.295 19.528 1 2.0113 1.5951 0 4435200 1628100 2807000 10511 1435 3992 4104 16445 16445 FALVAPVQAEEDSGNVNGK 19 1 0 Unmodified _FALVAPVQAEEDSGNVNGK_ 0 0 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 976.9943 2 972.986711 1943.95887 62190.18 -0.090059 -8.7626E-05 0.46614 0.00045355 0.37608 0.00036593 972.986680333875 977.495887976527 103.58 0.58893 103.58 103.3 103.89 0 137 38 5 0 0 0 0.00024674 1 57953 45.28 45.28 1 2.0362 1.6358 0 4227400 1262600 2964800 10512 1435 3992 4104 16446 16446 FALVTPK 7 1 0 Unmodified _FALVTPK_ 0 0 0 P49792 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 392.2461 2 388.239264 774.463976 NaN NaN NaN -0.15038 -5.8383E-05 NaN NaN NaN NaN 63.916 0.40087 63.916 63.796 64.197 3.8147E-06 0 0 0 0.032103 1 36641 74.415 5.0318 1 NaN NaN 0 3978000 0 3978000 10513 1588 3993 4105 16447 16447 FANHSVNPNCYAK 13 1 0 Unmodified _FANHSVNPNCYAK_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;A0A0A0MSY9;Q92800 A0A090N8E9;A0A0A0MSY9 A0A090N8E9 EZH2;EZH1 Histone-lysine N-methyltransferase EZH2;Histone-lysine N-methyltransferase EZH1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.9015 3 507.901625 1520.68305 84545.1 0.28255 0.00014351 -0.51006 -0.00025906 -0.22751 -0.00011556 507.901441929753 510.572892725195 27.169 0.28588 27.169 27.034 27.32 0 70 14 6 0 0 0 3.8371E-05 1 12492 61.11 55.161 1 0.89337 0.95402 0 21007000 12073000 8933600 10514 456;483 3994 4106 16448 16448 FANHSVNPNCYAK 13 1 0 Unmodified _FANHSVNPNCYAK_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;A0A0A0MSY9;Q92800 A0A090N8E9;A0A0A0MSY9 A0A090N8E9 EZH2;EZH1 Histone-lysine N-methyltransferase EZH2;Histone-lysine N-methyltransferase EZH1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.573 3 507.901625 1520.68305 83863.09 0.19799 0.00010056 0.18059 9.1724E-05 0.37859 0.00019229 507.902040012669 510.573095360063 32.018 0.62236 32.018 31.83 32.453 0 129 31 8 0 0 0 0.0003768 1 13639 43.297 41.389 1 1.9335 1.5245 0 5515100 2281500 3233500 10515 456;483 3994 4106 16449 16449 FANHSVNPNCYAK 13 1 0 Unmodified _FANHSVNPNCYAK_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;A0A0A0MSY9;Q92800 A0A090N8E9;A0A0A0MSY9 A0A090N8E9 EZH2;EZH1 Histone-lysine N-methyltransferase EZH2;Histone-lysine N-methyltransferase EZH1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.9076 3 507.901625 1520.68305 85261.46 0.40253 0.00020445 -0.49938 -0.00025364 -0.09685 -4.919E-05 507.901777074988 510.572750815098 32.091 0.68644 32.091 31.892 32.578 0 131 35 7 0 0 0 0.0033759 2 13222 33.317 30.366 1 1.9169 1.5147 0 3932500 1209200 2723300 10516 456;483 3994 4106 16450;16451 16450 FANSLVGVQQQLQAFNTYR 19 0 1 Unmodified _FANSLVGVQQQLQAFNTYR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1097.5712 2 1092.56345 2183.11235 NaN NaN NaN 0.52299 0.0005714 NaN NaN NaN NaN 115.73 0.40057 115.73 115.53 115.93 0 0 0 0 0.037525 1 73643 29.912 24.633 1 NaN NaN 0 7297100 0 7297100 10517 415 3995 4107 16452 16452 FANSLVGVQQQLQAFNTYR 19 0 1 Unmodified _FANSLVGVQQQLQAFNTYR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1097.5698 2 1092.56345 2183.11235 59283.6 0.24372 0.00026628 0.5617 0.00061369 0.80542 0.00087997 1093.06506437155 1098.06982910424 127.66 0.46975 127.66 127.46 127.93 0 74 17 8 0 0 0 0.0001624 1 76937 47.037 47.037 1 4.3027 3.643 0 4990000 821010 4169000 10518 415 3995 4107 16453 16453 FANYIDK 7 1 0 Unmodified _FANYIDK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 439.7283 2 435.721436 869.428318 91605.29 -0.031899 -1.3899E-05 0.15211 6.6278E-05 0.12021 5.2379E-05 435.721398806899 439.728490945076 40.186 0.85885 40.186 39.858 40.717 0 347 73 7 0 0 0 0.02738 2 20897 73.616 55.292 1 1.3722 1.6056 0 286050000 112280000 173770000 10519 1457 3996 4108 16454;16455 16454 FANYIDK 7 1 0 Unmodified _FANYIDK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 439.7285 2 435.721436 869.428318 92281.23 0.079712 3.4732E-05 -0.017854 -7.7792E-06 0.061859 2.6953E-05 435.721357566276 439.728442536784 39.199 0.76141 39.199 38.908 39.67 0 282 65 7 0 0 0 0.032931 1 20634 64.757 46.909 1 1.3375 1.5753 0 514770000 217770000 296990000 10520 1457 3996 4108 16456 16456 FANYIDK 7 1 0 Unmodified _FANYIDK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 439.7285 2 435.721436 869.428318 90506.66 -0.20885 -9.0999E-05 0.25707 0.00011201 0.048226 2.1013E-05 435.721558111847 439.72853047138 45.793 1.0094 45.793 45.486 46.495 0 323 75 7 0 0 0 0.055806 1 21873 52.403 41.334 1 3.7289 3.002 0 22026000 4394200 17632000 10521 1457 3996 4108 16457 16457 FANYIDK 7 1 0 Unmodified _FANYIDK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 439.7285 2 435.721436 869.428318 89957.15 -0.035379 -1.5415E-05 -0.031381 -1.3674E-05 -0.06676 -2.9089E-05 435.721500295998 439.72836386541 45.871 0.8972 45.871 45.559 46.456 -3.8147E-06 260 58 7 0 0 0 0.034246 1 21376 62.659 38.686 1 3.695 2.96 0 20163000 4089600 16074000 10522 1457 3996 4108 16458 16458 FAQIDEK 7 1 0 Unmodified _FAQIDEK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7193 2 425.718893 849.423233 91011.44 0.025809 1.0988E-05 0.87016 0.00037044 0.89597 0.00038143 425.718931439502 429.726096582822 27.776 0.8602 27.776 27.418 28.278 0 258 59 9 0 0 0 0.013841 2 12888 101.69 39.352 1 1.0399 1.1991 0 215640000 103840000 111790000 10523 2059 3997 4109 16459;16460 16459 FAQIDEK 7 1 0 Unmodified _FAQIDEK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7186 2 425.718893 849.423233 NaN NaN NaN 0.8672 0.00036918 NaN NaN NaN NaN 27.346 0.87499 27.346 26.862 27.737 0 0 0 0 0.014827 1 12600 105.39 43.052 1 NaN NaN 0 109590000 109590000 0 10524 2059 3997 4109 16461 16461 FAQIDEK 7 1 0 Unmodified _FAQIDEK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 429.7263 2 425.718893 849.423233 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.31 1 27.31 26.81 27.81 1.9073E-06 0 0 0 0.014222 1 12616 81.784 31.664 1 10525 2059 3997 4109 16462 16462 FAQIDEK 7 1 0 Unmodified _FAQIDEK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 425.7187 2 425.718893 849.423233 90254.83 -0.35078 -0.00014933 0.58074 0.00024723 0.22996 9.7899E-05 425.71910556237 429.726100798644 31.086 0.99108 31.086 30.776 31.767 0 230 59 7 0 0 0 0.026792 2 12975 79.116 34.505 1 2.1451 1.7394 0 25513000 8494700 17018000 10526 2059 3997 4109 16463;16464 16464 FAQIDEK 7 1 0 Unmodified _FAQIDEK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 425.7187 2 425.718893 849.423233 92786.9 -0.4653 -0.00019809 0.44891 0.00019111 -0.016397 -6.9805E-06 425.71915625796 429.726084687854 31.102 1.2075 31.102 30.701 31.908 1.9073E-06 301 64 9 0 0 0 0.022601 2 12536 91.906 35.396 1 2.2002 1.7743 0 23190000 7655300 15535000 10527 2059 3997 4109 16465;16466 16466 FAQLEFQLGDAER 13 0 1 Unmodified _FAQLEFQLGDAER_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.379 2 762.37808 1522.74161 68795.79 0.754 0.00057483 0.099481 7.5842E-05 0.85348 0.00065068 762.378275565158 767.382016705185 101.19 0.82582 101.19 100.82 101.64 0 347 63 7 0 0 0 0.00015608 2 61959 85.958 79.654 1 1.0642 1.1682 0 53779000 24505000 29273000 10528 1741 3998 4110 16467;16468 16468 FAQLEFQLGDAER 13 0 1 Unmodified _FAQLEFQLGDAER_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.3824 2 762.37808 1522.74161 69582.52 0.72355 0.00055162 0.24472 0.00018657 0.96827 0.00073819 762.378341994451 767.382182614394 100.49 0.88582 100.49 100.11 100.99 0 381 70 7 0 0 0 0.00016113 2 62962 101.95 101.95 1 1.0709 1.2209 0 98868000 44536000 54332000 10529 1741 3998 4110 16469;16470 16470 FAQLEFQLGDAER 13 0 1 Unmodified _FAQLEFQLGDAER_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.382 2 762.37808 1522.74161 69663.52 1.0142 0.00077323 0.35515 0.00027076 1.3694 0.001044 762.378328148689 767.382521484919 113.39 0.86696 113.39 113.09 113.96 0 244 42 8 0 0 0 0.0001182 2 65918 92.866 92.866 1 1.3615 1.1473 0 28237000 11434000 16803000 10530 1741 3998 4110 16471;16472 16471 FAQLEFQLGDAER 13 0 1 Unmodified _FAQLEFQLGDAER_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.3783 2 762.37808 1522.74161 69765.8 0.79079 0.00060288 0.2504 0.0001909 1.0412 0.00079378 762.378222958343 767.382355656456 113.27 0.96709 113.27 112.96 113.93 -7.6294E-06 232 48 8 0 0 0 0.00013837 2 64960 106.62 106.62 1 1.403 1.2206 0 24676000 10680000 13997000 10531 1741 3998 4110 16473;16474 16474 FAQPGSFEYEYAMR 14 0 1 Oxidation (M) _FAQPGSFEYEYAM(ox)R_ FAQPGSFEYEYAM(1)R FAQPGSFEYEYAM(76.93)R 0 1 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367;C9JYS8 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 856.3754 2 856.37468 1710.73481 65968.55 0.58734 0.00050298 -0.46894 -0.00040159 0.1184 0.00010139 856.374623354098 861.8801579072 77.89 0.80922 77.89 77.485 78.294 0 332 63 7 0 0 0 7.2219E-05 1 46075 76.927 71.321 1 2.0192 2.0652 0 31603000 11454000 20149000 10532 573 3999 4111 16475 16475 426 FAQSTNLK 8 1 0 Unmodified _FAQSTNLK_ 0 0 0 P25490;H0YJV7;O15391 P25490 P25490 YY1;YY2 Transcriptional repressor protein YY1;Transcription factor YY2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.7454 2 454.745442 907.476331 94594.32 -0.14792 -6.7267E-05 0.68536 0.00031166 0.53744 0.0002444 454.745543919101 458.753000596649 24.409 0.3832 24.409 24.237 24.621 0 41 14 5 0 0 0 0.0010071 1 10153 117.16 106.09 1 0.75903 0.77288 0 14178000 6981800 7195700 10533 1516 4000 4112 16476 16476 FASASIK 7 1 0 Unmodified _FASASIK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 366.2139 2 362.205421 722.39629 100558 0.42612 0.00015434 0.67922 0.00024602 1.1053 0.00040036 362.205456795011 366.212634032156 26.122 0.26976 26.122 26.02 26.29 0 29 12 4 0 0 0 0.02688 1 11606 74.415 9.6119 1 2.8801 2.8748 0 14970000 3422300 11548000 10534 2087 4001 4113 16477 16477 FASCVDASGGLK 12 1 0 Unmodified _FASCVDASGGLK_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.2969 2 606.289888 1210.56522 78728.84 0.82764 0.00050179 -1.1748 -0.0007123 -0.34721 -0.00021051 606.289634078455 610.296728585041 47.337 0.29493 47.337 47.214 47.509 3.8147E-06 81 24 6 0 0 0 0.0010242 1 25649 62.303 53.884 1 1.165 1.1843 0 13332000 6136800 7195300 10535 1122 4002 4114 16478 16478 FASENDLPEWK 11 1 0 Unmodified _FASENDLPEWK_ 0 0 0 A0A140VK94;F6WQW2;P43487;C9JXG8;D3DX26;C9JJ34;C9JDM3;B7Z6U1;C9JGV6;B4DE76;C9JIC6 A0A140VK94 A0A140VK94 RANBP1 Ran-specific GTPase-activating protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3219 2 668.314417 1334.61428 75280.19 0.62569 0.00041816 0.30549 0.00020416 0.93118 0.00062232 668.315119388912 672.321592671758 78.604 0.58037 78.604 78.294 78.875 0 220 50 7 0 0 0 0.0081744 1 46399 51.276 51.276 1 3.3123 3.2946 0 26173000 6133800 20039000 10536 621 4003 4115 16479 16479 FASENDLPEWK 11 1 0 Unmodified _FASENDLPEWK_ 0 0 0 A0A140VK94;F6WQW2;P43487;C9JXG8;D3DX26;C9JJ34;C9JDM3;B7Z6U1;C9JGV6;B4DE76;C9JIC6 A0A140VK94 A0A140VK94 RANBP1 Ran-specific GTPase-activating protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3215 2 668.314417 1334.61428 75169.59 0.75913 0.00050734 0.50296 0.00033614 1.2621 0.00084348 668.315201814223 672.321609771627 77.605 0.60278 77.605 77.335 77.938 0 246 49 8 0 0 0 0.00043721 1 47019 78.556 78.556 1 3.3267 3.4035 0 31680000 7862800 23817000 10537 621 4003 4115 16480 16480 FASENDLPEWK 11 1 0 Unmodified _FASENDLPEWK_ 0 0 0 A0A140VK94;F6WQW2;P43487;C9JXG8;D3DX26;C9JJ34;C9JDM3;B7Z6U1;C9JGV6;B4DE76;C9JIC6 A0A140VK94 A0A140VK94 RANBP1 Ran-specific GTPase-activating protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.3225 2 668.314417 1334.61428 75727.47 0.47924 0.00032029 0.17706 0.00011833 0.6563 0.00043861 668.314771020064 672.321550661913 89.94 0.48287 89.94 89.668 90.15 0 134 32 6 0 0 0 0.021359 1 49697 43.308 43.308 1 3.69 2.9152 0 3056000 631260 2424700 10538 621 4003 4115 16481 16481 FASFIDK 7 1 0 Unmodified _FASFIDK_ 0 0 0 CON__P05787;P05787;F8VUG2;F8W1U3;CON__Q9H552;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;H0YHD9;F8VS61;CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729;CON__P35908;P35908;Q01546;CON__Q01546;CON__P07744;CON__Q6NXH9;CON__Q9R0H5;Q0IIN1;CON__Q7Z794;Q7Z794;CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;F8W0C6;CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__P05787;CON__P08729;CON__Q3KNV1;CON__P35908;CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647;CON__Q7RTS7 CON__P35908 KRT8;KRT84;KRT72;KRT77;KRT7;KRT2;KRT76;KRT75;KRT6C;KRT6A;KRT79;KRT5;KRT74;KRT73 Keratin, type II cytoskeletal 8;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.2185 2 414.218529 826.422505 93503.81 0.17941 7.4316E-05 -0.15236 -6.3112E-05 0.02705 1.1205E-05 414.218394434599 418.225382263846 59.816 1.1775 59.816 59.45 60.628 0 543 102 7 0 0 0 0.020239 3 33962 94.262 10.018 1 0.65758 0.77807 0 424310000 255840000 168460000 + 10539 1166;1156;1171;1158;1162;859;1154;1147;1180;1175;1170 4004 4116 16482;16483;16484 16483 FASFIDK 7 1 0 Unmodified _FASFIDK_ 0 0 0 CON__P05787;P05787;F8VUG2;F8W1U3;CON__Q9H552;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;H0YHD9;F8VS61;CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729;CON__P35908;P35908;Q01546;CON__Q01546;CON__P07744;CON__Q6NXH9;CON__Q9R0H5;Q0IIN1;CON__Q7Z794;Q7Z794;CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;F8W0C6;CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__P05787;CON__P08729;CON__Q3KNV1;CON__P35908;CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647;CON__Q7RTS7 CON__P35908 KRT8;KRT84;KRT72;KRT77;KRT7;KRT2;KRT76;KRT75;KRT6C;KRT6A;KRT79;KRT5;KRT74;KRT73 Keratin, type II cytoskeletal 8;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.2182 2 414.218529 826.422505 92990.26 0.57014 0.00023616 -0.18786 -7.7817E-05 0.38227 0.00015834 414.218359832277 418.225382307666 58.654 1.0562 58.654 58.3 59.356 3.8147E-06 544 95 8 0 0 0 0.020239 1 33958 94.262 22.123 1 0.67319 0.79244 0 428530000 255890000 172640000 + 10540 1166;1156;1171;1158;1162;859;1154;1147;1180;1175;1170 4004 4116 16485 16485 FASFIDK 7 1 0 Unmodified _FASFIDK_ 0 0 0 CON__P05787;P05787;F8VUG2;F8W1U3;CON__Q9H552;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;H0YHD9;F8VS61;CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729;CON__P35908;P35908;Q01546;CON__Q01546;CON__P07744;CON__Q6NXH9;CON__Q9R0H5;Q0IIN1;CON__Q7Z794;Q7Z794;CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;F8W0C6;CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__P05787;CON__P08729;CON__Q3KNV1;CON__P35908;CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647;CON__Q7RTS7 CON__P35908 KRT8;KRT84;KRT72;KRT77;KRT7;KRT2;KRT76;KRT75;KRT6C;KRT6A;KRT79;KRT5;KRT74;KRT73 Keratin, type II cytoskeletal 8;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 414.2186 2 414.218529 826.422505 93361.57 -0.25307 -0.00010482 0.46623 0.00019312 0.21317 8.8298E-05 414.21859127544 418.225694330587 68.627 1.6011 68.627 68.096 69.697 0 522 116 8 0 0 0 0.029647 2 35706 69.998 19.872 1 0.58047 0.47052 0 25071000 16025000 9045200 + 10541 1166;1156;1171;1158;1162;859;1154;1147;1180;1175;1170 4004 4116 16486;16487 16486 FASFIDK 7 1 0 Unmodified _FASFIDK_ 0 0 0 CON__P05787;P05787;F8VUG2;F8W1U3;CON__Q9H552;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;H0YHD9;F8VS61;CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729;CON__P35908;P35908;Q01546;CON__Q01546;CON__P07744;CON__Q6NXH9;CON__Q9R0H5;Q0IIN1;CON__Q7Z794;Q7Z794;CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;F8W0C6;CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__P05787;CON__P08729;CON__Q3KNV1;CON__P35908;CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647;CON__Q7RTS7 CON__P35908 KRT8;KRT84;KRT72;KRT77;KRT7;KRT2;KRT76;KRT75;KRT6C;KRT6A;KRT79;KRT5;KRT74;KRT73 Keratin, type II cytoskeletal 8;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 414.2185 2 414.218529 826.422505 93284.06 -0.31728 -0.00013142 0.45834 0.00018985 0.14106 5.8429E-05 414.218586200207 418.225685270358 68.937 1.5365 68.937 68.451 69.987 0 552 107 7 0 0 0 0.055806 2 35103 52.403 8.2859 1 0.56053 0.44913 0 19917000 12465000 7451600 + 10542 1166;1156;1171;1158;1162;859;1154;1147;1180;1175;1170 4004 4116 16488;16489 16488 FASFPDYLVIQIK 13 1 0 Unmodified _FASFPDYLVIQIK_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.4332 2 770.924135 1539.83372 NaN NaN NaN -0.40008 -0.00030843 NaN NaN NaN NaN 125.88 0.49696 125.88 125.62 126.12 -7.6294E-06 0 0 0 0.0011053 1 81879 77.662 30.844 1 NaN NaN 0 5780200 0 5780200 10543 613 4005 4117 16490 16490 FASFPDYLVIQIK 13 1 0 Unmodified _FASFPDYLVIQIK_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.9319 2 770.924135 1539.83372 70202.28 0.85038 0.00065557 0.23071 0.00017786 1.0811 0.00083344 770.925507443778 774.931143924887 125.43 0.49878 125.43 125.17 125.67 0 136 34 6 0 0 0 3.1931E-06 1 83520 108.67 45.384 1 3.7681 3.8011 0 13314000 2708400 10606000 10544 613 4005 4117 16491 16491 FASGGCDNLIK 11 1 0 Unmodified _FASGGCDNLIK_ 0 0 0 Q53GB2;A0A0C4DFR6;P55735;A8MXL6;Q59FA6 Q53GB2 Q53GB2 SEC13 Protein SEC13 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.2844 2 591.284605 1180.55466 78918.23 0.57063 0.00033741 -0.57454 -0.00033972 -0.0039076 -2.3105E-06 591.284387321188 595.291235731729 48.032 0.28764 48.032 47.889 48.177 0 64 19 5 0 0 0 0.0012067 2 26836 69.275 61.708 1 1.9418 1.9928 0 17748000 6258500 11489000 10545 506 4006 4118 16492;16493 16493 FASLEFSPGSK 11 1 0 Unmodified _FASLEFSPGSK_ 0 0 0 Q8N766;Q5TG59 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.2969 2 585.295496 1168.57644 81173.27 0.4748 0.0002779 0.46625 0.0002729 0.94106 0.0005508 585.295897071121 589.302751354819 87.508 0.67519 87.508 87.193 87.868 0 98 38 4 0 0 0 0.025409 1 47284 51.276 51.276 1 0.697 0.61339 0 1154200 699790 454420 10546 1913 4007 4119 16494 16494 FASVLPEYLK 10 1 0 Unmodified _FASVLPEYLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.8273 2 583.826432 1165.63831 79320.82 0.74016 0.00043213 0.17696 0.00010331 0.91712 0.00053544 583.826472068286 587.833506083523 101.09 0.91803 101.09 100.74 101.65 0 343 69 6 0 0 0 0.0029629 2 61905 73.985 68.503 1 1.0023 1.0773 0 38962000 18641000 20321000 10547 1887 4008 4120 16495;16496 16495 FASVLPEYLK 10 1 0 Unmodified _FASVLPEYLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3279 2 583.826432 1165.63831 80143.92 0.71048 0.0004148 0.18648 0.00010887 0.89696 0.00052367 583.826419191941 587.833463665588 100.3 1.0145 100.3 99.896 100.91 -7.6294E-06 371 74 6 0 0 0 0.011915 2 62793 57.859 57.859 1 0.96037 1.0731 0 92288000 46076000 46212000 10548 1887 4008 4120 16497;16498 16498 FASVLPEYLK 10 1 0 Unmodified _FASVLPEYLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.8277 2 583.826432 1165.63831 80338.66 0.99048 0.00057827 0.23023 0.00013442 1.2207 0.00071269 583.826539432671 587.833673460972 113.53 0.78166 113.53 113.27 114.05 0 201 37 8 0 0 0 0.016025 2 66043 48.423 48.423 1 2.0283 1.6077 0 18704000 6442800 12261000 10549 1887 4008 4120 16499;16500 16499 FASVLPEYLK 10 1 0 Unmodified _FASVLPEYLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.8273 2 583.826432 1165.63831 79793.72 0.58605 0.00034215 0.255 0.00014888 0.84105 0.00049103 583.826546535288 587.83370039288 113.39 0.75908 113.39 113.07 113.83 0 195 37 7 0 0 0 0.024135 1 64992 45.161 45.161 1 2.019 1.6225 0 16638000 5116100 11522000 10550 1887 4008 4120 16501 16501 FASWALESDNNTALLLSK 18 1 0 Unmodified _FASWALESDNNTALLLSK_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 995.0132 2 990.50728 1979.00001 61382.97 0.30197 0.00029911 -0.1049 -0.0001039 0.19708 0.00019521 991.008854219321 995.015388511782 115.2 0.67324 115.2 114.9 115.58 0 261 43 9 0 0 0 3.5342E-05 1 73190 62.891 62.891 1 1.0005 1.0501 0 30364000 15915000 14449000 10551 862 4009 4121 16502 16502 FASWALESDNNTALLLSK 18 1 0 Unmodified _FASWALESDNNTALLLSK_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 995.0162 2 990.50728 1979.00001 61355.46 0.44799 0.00044374 -0.062472 -6.1879E-05 0.38552 0.00038186 991.009024914991 995.015504545876 114.69 0.63567 114.69 114.38 115.01 0 233 39 9 0 0 0 1.1716E-23 1 74626 137.62 137.62 1 1.2021 1.2872 0 37059000 16164000 20895000 10552 862 4009 4121 16503 16503 FASWALESDNNTALLLSK 18 1 0 Unmodified _FASWALESDNNTALLLSK_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 991.0078 2 990.50728 1979.00001 60730.44 0.45767 0.00045332 0.42124 0.00041724 0.8789 0.00087056 991.009622538049 994.514708666778 126.61 0.72293 126.61 126.36 127.08 0 155 28 9 0 0 0 3.6278E-05 2 76123 62.287 62.287 1 1.0866 0.86647 0 9550800 4475200 5075600 10553 862 4009 4121 16504;16505 16504 FASWALESDNNTALLLSK 18 1 0 Unmodified _FASWALESDNNTALLLSK_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 990.5088 2 990.50728 1979.00001 60641.49 0.24797 0.00024561 -0.012829 -1.2708E-05 0.23514 0.00023291 991.009081874871 994.514653718282 126.46 0.9154 126.46 126.02 126.93 0 152 40 8 0 0 0 0.0096455 1 75083 29.638 29.638 1 0.99593 0.82102 0 10871000 4377500 6493900 10554 862 4009 4121 16506 16506 FASYLTFSPSEVK 13 1 0 Unmodified _FASYLTFSPSEVK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3751 2 738.374475 1474.7344 70566.02 0.80484 0.00059428 -0.63142 -0.00046622 0.17342 0.00012805 738.374861957919 742.380730917111 101.4 0.92229 101.4 101.1 102.02 7.6294E-06 279 72 6 0 0 0 5.6769E-05 2 62226 96.171 96.171 1 2.039 2.1605 0 31337000 9613400 21724000 10555 1611 4010 4122 16507;16508 16507 FASYLTFSPSEVK 13 1 0 Unmodified _FASYLTFSPSEVK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.3798 2 738.374475 1474.7344 70418.45 0.7587 0.0005602 -1.042 -0.00076936 -0.28327 -0.00020916 738.374439646969 742.380361056969 100.6 0.90624 100.6 100.31 101.22 0 313 71 7 0 0 0 0.00034152 1 63044 63.624 63.624 1 2.0369 2.1846 0 37248000 11239000 26009000 10556 1611 4010 4122 16509 16509 FASYLTFSPSEVK 13 1 0 Unmodified _FASYLTFSPSEVK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.3817 2 738.374475 1474.7344 70933 1.1681 0.00086252 -0.60888 -0.00044958 0.55926 0.00041294 738.875661883951 742.381127899844 113.73 0.66083 113.73 113.48 114.14 0 137 29 7 0 0 0 0.00028037 2 66248 66.595 66.595 1 1.7747 1.4 0 5935200 2024000 3911200 10557 1611 4010 4122 16510;16511 16510 FASYLTFSPSEVK 13 1 0 Unmodified _FASYLTFSPSEVK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.3821 2 738.374475 1474.7344 72053.66 0.77769 0.00057423 -0.47928 -0.00035388 0.29842 0.00022034 738.875594243341 742.381239688942 113.58 0.61532 113.58 113.31 113.93 0 132 29 8 0 0 0 0.00013973 3 65199 81.865 81.865 1 1.6375 1.3326 0 6981800 2579500 4402300 10558 1611 4010 4122 16512;16513;16514 16513 FATDGEGYKPCDPQVIR 17 1 1 Unmodified _FATDGEGYKPCDPQVIR_ 0 0 1 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.9865 3 651.64388 1951.90981 NaN NaN NaN 2.5364 0.0016528 NaN NaN NaN NaN 60.925 0.10543 60.925 60.858 60.964 0 0 0 0 0.036791 1 34800 35.329 24.953 1 NaN NaN 0 1749900 0 1749900 10559 415 4011 4123 16515 16515 FATDGEGYKPCDPQVIR 17 1 1 Unmodified _FATDGEGYKPCDPQVIR_ 0 0 1 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.65 3 651.64388 1951.90981 NaN NaN NaN -0.48484 -0.00031594 NaN NaN NaN NaN 70.393 0.34891 70.393 70.22 70.569 -7.6294E-06 0 0 0 0.044245 1 36938 33.301 27.033 1 NaN NaN 0 914810 0 914810 10560 415 4011 4123 16516 16516 FATHAAALSVR 11 0 1 Unmodified _FATHAAALSVR_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 381.8807 3 381.88049 1142.61964 NaN NaN NaN 0.44242 0.00016895 NaN NaN NaN NaN 39.781 0.38568 39.781 39.628 40.013 0 0 0 0 0.014925 1 20680 42.862 37.399 1 NaN NaN 0 13997000 13997000 0 10561 1510 4012 4124 16517 16517 FATHAAALSVR 11 0 1 Unmodified _FATHAAALSVR_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 385.2162 3 381.88049 1142.61964 97731.59 0.16753 6.3976E-05 -0.081142 -3.0987E-05 0.086386 3.2989E-05 381.880408720446 385.216477694357 38.322 0.432 38.322 38.191 38.623 0 142 36 6 0 0 0 0.0027005 1 20087 39.878 30.874 1 1.7002 1.965 0 56168000 17683000 38486000 10562 1510 4012 4124 16518 16518 FAVALDSEQNNIHVK 15 1 0 Unmodified _FAVALDSEQNNIHVK_ 0 0 0 B4E0Q4;B4DZJ7;O00267;B4DJK4 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.9644 3 562.293288 1683.85803 82858.14 0.48205 0.00027106 -0.50595 -0.00028449 -0.023896 -1.3437E-05 562.627568048623 564.964174834893 69.499 0.86156 69.499 68.958 69.819 0 171 67 5 0 0 0 0.040906 1 41519 18.321 18.321 1 1.9659 1.9623 0 14965000 4647600 10317000 10563 1056 4013 4125 16519 16519 FAVGIVIGR 9 0 1 Unmodified _FAVGIVIGR_ 0 0 0 A0A024R8A7;Q96I24;Q6PJY1;B4DWL1 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3;FUBP1 Far upstream element-binding protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2906 2 466.28982 930.565087 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.532 1 94.532 94.032 95.032 7.6294E-06 0 0 0 0.0065179 1 58765 67.032 33.294 1 10564 245 4014 4126 16520 16520 FAVLHGEAPR 10 0 1 Unmodified _FAVLHGEAPR_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q59FS8 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 366.2011 3 366.201452 1095.58253 NaN NaN NaN -0.23852 -8.7347E-05 NaN NaN NaN NaN 39.78 0.38568 39.78 39.628 40.013 0 0 0 0 0.001258 1 20665 60.102 36.749 1 NaN NaN 0 10165000 10165000 0 10565 241 4015 4127 16521 16521 FAYKDPEK 8 2 0 Unmodified _FAYKDPEK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.2671 2 499.2531 996.491647 85435.16 0.3308 0.00016515 1.0552 0.00052679 1.386 0.00069194 499.253025772008 507.267160677607 24.719 0.77376 24.719 24.402 25.176 0 158 41 6 0 0 0 0.040343 1 8736 88.948 52.762 1 1.8764 1.6019 0 15747000 5045700 10701000 10566 69 4016 4128 16522 16522 FAYKDPEK 8 2 0 Unmodified _FAYKDPEK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.2674 2 499.2531 996.491647 82885.88 0.24521 0.00012242 0.69926 0.00034911 0.94447 0.00047153 499.253462707783 507.267160748283 24.696 0.96953 24.696 24.361 25.331 0 163 49 7 0 0 0 0.0055218 1 8265 104.06 82.529 1 1.8332 1.5505 0 12934000 4495100 8438600 10567 69 4016 4128 16523 16523 FAYNDQGQVR 10 0 1 Unmodified _FAYNDQGQVR_ 0 0 0 O43463;B4DMP6 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.2906 2 599.285994 1196.55744 78679.9 0.51535 0.00030884 -0.15941 -9.5531E-05 0.35594 0.00021331 599.285886733584 604.290056453189 32.834 0.77155 32.834 32.443 33.214 0 287 73 6 0 0 0 1.0124E-05 2 16369 105.14 105.14 1 1.05 1.0813 0 24729000 12741000 11988000 10568 1385 4017 4129 16524;16525 16525 FAYNDQGQVR 10 0 1 Unmodified _FAYNDQGQVR_ 0 0 0 O43463;B4DMP6 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.2905 2 599.285994 1196.55744 79721.57 0.74858 0.00044862 -0.41022 -0.00024584 0.33837 0.00020278 599.285722677488 604.28996648262 32.384 0.58198 32.384 32.009 32.591 0 231 56 6 0 0 0 1.3272E-06 1 16087 111.74 111.74 1 0.98398 1.093 0 43062000 22866000 20196000 10569 1385 4017 4129 16526 16526 FAYNDQGQVR 10 0 1 Unmodified _FAYNDQGQVR_ 0 0 0 O43463;B4DMP6 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 604.29 2 599.285994 1196.55744 76326.2 0.54042 0.00032386 0.0089372 5.3559E-06 0.54935 0.00032922 599.28598459879 604.290070775874 38.013 0.8415 38.013 37.69 38.531 0 249 67 6 0 0 0 0.00029172 2 17118 91.069 91.069 1 1.8359 1.5015 0 16131000 6036500 10095000 10570 1385 4017 4129 16527;16528 16527 FAYNDQGQVR 10 0 1 Unmodified _FAYNDQGQVR_ 0 0 0 O43463;B4DMP6 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.2864 2 599.285994 1196.55744 76908.92 0.36037 0.00021597 0.15461 9.2657E-05 0.51498 0.00030862 599.286135881019 604.290181682978 38.183 0.76093 38.183 37.917 38.678 0 280 59 8 0 0 0 1.1985E-05 2 16801 103.74 96.171 1 1.8509 1.5181 0 13640000 4581600 9058400 10571 1385 4017 4129 16529;16530 16530 FCADCIITALR 11 0 1 Unmodified _FCADCIITALR_ 0 0 0 X6RFN3;Q99496 X6RFN3 X6RFN3 RNF2 E3 ubiquitin-protein ligase RING2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.3331 2 670.32849 1338.64243 76276.3 1.1952 0.00080119 -0.39131 -0.00026231 0.80391 0.00053888 670.328332963439 675.332464354372 108.58 0.4113 108.58 108.33 108.74 0 114 30 5 0 0 0 0.0004546 2 67761 77.192 77.192 1 1.0786 1.0938 0 15129000 8570700 6558400 10572 1992 4018 4130 16531;16532 16531 FCADCIITALR 11 0 1 Unmodified _FCADCIITALR_ 0 0 0 X6RFN3;Q99496 X6RFN3 X6RFN3 RNF2 E3 ubiquitin-protein ligase RING2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3321 2 670.32849 1338.64243 75840.39 0.76151 0.00051046 -0.038486 -2.5798E-05 0.72303 0.00048467 670.328715240983 675.332206678767 107.94 0.49725 107.94 107.66 108.15 0 118 35 4 0 0 0 0.00071156 1 68966 73.067 67.585 1 1.1272 1.1101 0 14564000 7089800 7474200 10573 1992 4018 4130 16533 16533 FCADCIITALR 11 0 1 Unmodified _FCADCIITALR_ 0 0 0 X6RFN3;Q99496 X6RFN3 X6RFN3 RNF2 E3 ubiquitin-protein ligase RING2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.332 2 670.32849 1338.64243 74769.84 0.656 0.00043974 -0.57479 -0.0003853 0.081211 5.4438E-05 670.328643620873 675.331923423451 120.03 0.39574 120.03 119.8 120.2 0 89 17 7 0 0 0 0.0021173 2 71116 62.303 58.416 1 1.6306 1.4024 0 6840700 2335500 4505200 10574 1992 4018 4130 16534;16535 16534 FCADCIITALR 11 0 1 Unmodified _FCADCIITALR_ 0 0 0 X6RFN3;Q99496 X6RFN3 X6RFN3 RNF2 E3 ubiquitin-protein ligase RING2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.3287 2 670.32849 1338.64243 76324.48 0.72839 0.00048826 -0.57861 -0.00038786 0.14978 0.0001004 670.328682481105 675.331882891516 119.79 0.45592 119.79 119.59 120.05 -7.6294E-06 80 18 7 0 0 0 0.0013004 3 70069 68.557 68.557 1 1.7804 1.4836 0 6870000 2875200 3994800 10575 1992 4018 4130 16536;16537;16538 16538 FCDTCLQEFLSEGVFK 16 1 0 Unmodified _FCDTCLQEFLSEGVFK_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;Q2KJU6;Q2KJU5;A0A0C4DFM9;B4DUU9;F6SA91;C9JJ10 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 994.9593 2 990.447519 1978.88049 NaN NaN NaN -0.32399 -0.00032089 NaN NaN NaN NaN 127.36 0.25005 127.36 127.22 127.47 0 0 0 0 0.00038459 1 82934 67.456 61.737 1 NaN NaN 0 2632400 0 2632400 10576 11 4019 4131 16539 16539 FCDTCLQEFLSEGVFK 16 1 0 Unmodified _FCDTCLQEFLSEGVFK_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;Q2KJU6;Q2KJU5;A0A0C4DFM9;B4DUU9;F6SA91;C9JJ10 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 990.4465 2 990.447519 1978.88049 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.3 1 127.3 126.8 127.8 7.6294E-06 0 0 0 0.052698 1 82923 38.021 32.297 1 10577 11 4019 4131 16540 16540 FCDTCLQEFLSEGVFK 16 1 0 Unmodified _FCDTCLQEFLSEGVFK_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;Q2KJU6;Q2KJU5;A0A0C4DFM9;B4DUU9;F6SA91;C9JJ10 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 994.4564 2 990.447519 1978.88049 NaN NaN NaN 0.12398 0.00012279 NaN NaN NaN NaN 126.97 0.28529 126.97 126.84 127.12 -7.6294E-06 0 0 0 0.00013255 1 84735 74.76 69.376 1 NaN NaN 0 3552400 0 3552400 10578 11 4019 4131 16541 16541 FCEYETAEQGLLNR 14 0 1 Unmodified _FCEYETAEQGLLNR_ 0 0 0 Q8WWU0;Q8WXB7;E9PEP7;A0A024RC04;B7ZKJ5;P17010;P08048 Q8WWU0 Q8WWU0 ZFX;ZFY Zinc finger X-chromosomal protein;Zinc finger Y-chromosomal protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.398 2 865.396144 1728.77773 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.41 1 80.41 79.91 80.91 0 0 0 0 0.00045568 1 47807 83 57.061 1 10579 351 4020 4132 16542 16542 FCEYETAEQGLLNR 14 0 1 Unmodified _FCEYETAEQGLLNR_ 0 0 0 Q8WWU0;Q8WXB7;E9PEP7;A0A024RC04;B7ZKJ5;P17010;P08048 Q8WWU0 Q8WWU0 ZFX;ZFY Zinc finger X-chromosomal protein;Zinc finger Y-chromosomal protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.3968 2 865.396144 1728.77773 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.414 1 79.414 78.914 79.914 7.6294E-06 0 0 0 9.0315E-07 1 48241 103.22 66.887 1 10580 351 4020 4132 16543 16543 FCEYETAEQGLLNR 14 0 1 Unmodified _FCEYETAEQGLLNR_ 0 0 0 Q8WWU0;Q8WXB7;E9PEP7;A0A024RC04;B7ZKJ5;P17010;P08048 Q8WWU0 Q8WWU0 ZFX;ZFY Zinc finger X-chromosomal protein;Zinc finger Y-chromosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 870.905 2 865.396144 1728.77773 65638.54 0.46483 0.00040226 -0.4557 -0.00039436 0.0091279 7.8993E-06 865.39613776984 870.399510649323 92.374 0.52112 92.374 92.151 92.673 0 104 26 6 0 0 0 0.031992 1 51380 30.563 30.563 1 1.1672 1.0091 0 2617800 1187700 1430100 10581 351 4020 4132 16544 16544 FCEYETAEQGLLNR 14 0 1 Unmodified _FCEYETAEQGLLNR_ 0 0 0 Q8WWU0;Q8WXB7;E9PEP7;A0A024RC04;B7ZKJ5;P17010;P08048 Q8WWU0 Q8WWU0 ZFX;ZFY Zinc finger X-chromosomal protein;Zinc finger Y-chromosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 865.3953 2 865.396144 1728.77773 65297.18 0.16794 0.00014533 -0.041585 -3.5987E-05 0.12635 0.00010935 865.396129090188 870.400475773275 92.327 0.62161 92.327 92.042 92.664 0 85 30 5 0 0 0 0.023861 1 50511 32.859 32.859 1 1.1553 1.0326 0 2312300 1005300 1307000 10582 351 4020 4132 16545 16545 FCFTPHTEEGCLSER 15 0 1 Unmodified _FCFTPHTEEGCLSER_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.27 3 623.934666 1868.78217 79492.53 0.67222 0.00041942 -0.29073 -0.0001814 0.38149 0.00023803 623.934517231262 627.270532672029 65.523 0.52738 65.523 65.254 65.782 0 215 47 6 0 0 0 0.0001936 1 37736 53.403 46.966 1 1.3618 1.4276 0 12321000 4750100 7571300 10583 587 4021 4133 16546 16546 FCGTSFFTVGDDK 13 1 0 Unmodified _FCGTSFFTVGDDK_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.8248 2 740.824292 1479.63403 71429.34 0.80989 0.00059999 -0.024021 -1.7796E-05 0.78587 0.00058219 740.824486648115 744.831275329808 95.361 0.73111 95.361 95.054 95.785 0 279 56 7 0 0 0 1.1843E-09 2 57952 124.1 124.1 1 0.81808 0.85453 0 29955000 15294000 14662000 10584 402 4022 4134 16547;16548 16548 FCGTSFFTVGDDK 13 1 0 Unmodified _FCGTSFFTVGDDK_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.8246 2 740.824292 1479.63403 71599.63 0.81561 0.00060422 -0.06053 -4.4842E-05 0.75508 0.00055938 741.325814403578 744.831262244373 94.567 0.72707 94.567 94.283 95.01 7.6294E-06 327 60 7 0 0 0 3.4365E-14 2 58797 136.48 128.83 1 0.87235 0.91235 0 34416000 17871000 16545000 10585 402 4022 4134 16549;16550 16550 FCGTSFFTVGDDK 13 1 0 Unmodified _FCGTSFFTVGDDK_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.8317 2 740.824292 1479.63403 70214.04 0.87292 0.00064668 -0.011604 -8.5967E-06 0.86132 0.00063808 740.824369125783 744.831409574012 108.31 0.83526 108.31 107.97 108.81 0 234 42 8 0 0 0 0.00013619 2 62060 80.979 76.962 1 1.3555 1.0638 0 11368000 5209700 6157800 10586 402 4022 4134 16551;16552 16551 FCGTSFFTVGDDK 13 1 0 Unmodified _FCGTSFFTVGDDK_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.8249 2 740.824292 1479.63403 70489.06 0.69997 0.00051856 -0.075296 -5.5781E-05 0.62468 0.00046278 740.824267389686 744.831308017268 108.16 0.72868 108.16 107.9 108.62 7.6294E-06 212 36 8 0 0 0 0.00022161 2 61162 69.451 69.451 1 1.3611 1.1232 0 11217000 4886300 6331200 10587 402 4022 4134 16553;16554 16554 FCIQEIEK 8 1 0 Unmodified _FCIQEIEK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.7665 2 533.765517 1065.51648 83102.84 0.55594 0.00029674 0.42667 0.00022774 0.98261 0.00052448 533.765789716275 537.772834599735 70.858 0.50626 70.858 70.613 71.119 0 172 39 6 0 0 0 0.0099928 1 41206 73.26 44.111 1 1.1135 1.0918 0 22582000 11484000 11097000 10588 907 4023 4135 16555 16555 FCIQEIEK 8 1 0 Unmodified _FCIQEIEK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.7663 2 533.765517 1065.51648 83242.41 0.3798 0.00020273 0.32223 0.000172 0.70203 0.00037472 533.765676013905 537.772708558926 69.542 0.61472 69.542 69.192 69.807 0 165 52 5 0 0 0 0.027337 1 41361 53.968 29.074 1 1.1388 1.1524 0 28994000 13044000 15949000 10589 907 4023 4135 16556 16556 FCIQEIEK 8 1 0 Unmodified _FCIQEIEK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.7726 2 533.765517 1065.51648 81530.08 0.46967 0.00025069 -0.39407 -0.00021034 0.075597 4.0351E-05 533.765388625147 537.772468271928 81.469 0.6984 81.469 81.156 81.855 0 163 41 7 0 0 0 0.019981 2 44118 58.782 42.309 1 1.2946 1.0199 0 5820700 2798600 3022100 10590 907 4023 4135 16557;16558 16557 FCIQEIEK 8 1 0 Unmodified _FCIQEIEK_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.7726 2 533.765517 1065.51648 82058.09 0.50748 0.00027088 -0.080005 -4.2704E-05 0.42748 0.00022817 533.76554148652 537.772549740717 81.665 0.61604 81.665 81.4 82.016 0 125 32 6 0 0 0 0.011179 2 43391 70.525 45.631 1 1.2669 1.0367 0 4842900 2038400 2804500 10591 907 4023 4135 16559;16560 16559 FCIWTESAFR 10 0 1 Unmodified _FCIWTESAFR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8131 2 658.808248 1315.60194 74337.3 0.77449 0.00051024 0.11754 7.7433E-05 0.89203 0.00058768 658.808211879288 663.812407587812 105.96 1.0831 105.96 105.52 106.6 0 481 80 8 0 0 0 0.0027721 2 65663 67.563 64.45 1 0.67718 0.7589 0 90622000 51962000 38660000 10592 1548 4024 4136 16561;16562 16562 FCIWTESAFR 10 0 1 Unmodified _FCIWTESAFR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.8087 2 658.808248 1315.60194 72991.61 0.79475 0.00052359 0.26397 0.00017391 1.0587 0.0006975 658.808274239026 663.812433304617 105.21 0.99525 105.21 104.74 105.73 0 499 74 9 0 0 0 0.00022451 2 66535 93.267 88.851 1 0.69073 0.78641 0 129420000 81486000 47937000 10593 1548 4024 4136 16563;16564 16563 FCIWTESAFR 10 0 1 Unmodified _FCIWTESAFR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.8078 2 658.808248 1315.60194 72208.9 0.58715 0.00038682 0.049282 3.2467E-05 0.63643 0.00041929 658.808307255987 663.81244842795 117.22 1.3273 117.22 116.96 118.28 0 284 57 9 0 0 0 0.00051211 1 68927 85.67 80.188 1 1.0038 0.86334 0 48320000 24609000 23712000 10594 1548 4024 4136 16565 16565 FCIWTESAFR 10 0 1 Unmodified _FCIWTESAFR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.8127 2 658.808248 1315.60194 73780.84 0.64745 0.00042655 0.11199 7.3781E-05 0.75944 0.00050033 658.808363126569 663.812514092456 117.06 1.3249 117.06 116.74 118.07 0 295 61 10 0 0 0 0.0026728 2 67855 68.016 64.522 1 0.91667 0.79957 0 39058000 20408000 18650000 10595 1548 4024 4136 16566;16567 16566 FCMISATFCDSQLR 14 0 1 Oxidation (M) _FCM(ox)ISATFCDSQLR_ FCM(1)ISATFCDSQLR FCM(79.69)ISATFCDSQLR 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 881.3859 2 876.381125 1750.7477 NaN NaN NaN 0.53529 0.00046912 NaN NaN NaN NaN 86.897 0.30267 86.897 86.751 87.053 0 0 0 0 0.00012668 1 52514 79.693 73.721 1 NaN NaN 0 3175600 0 3175600 10596 908 4025 4137 16568 16568 737 FCMISATFCDSQLR 14 0 1 Oxidation (M) _FCM(ox)ISATFCDSQLR_ FCM(1)ISATFCDSQLR FCM(59.2)ISATFCDSQLR 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.3859 2 876.381125 1750.7477 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.216 1 86.216 85.716 86.716 0 0 0 0 0.001301 1 53148 59.198 53.475 1 10597 908 4025 4137 16569 16569 737 FCSDCIVTALR 11 0 1 Unmodified _FCSDCIVTALR_ 0 0 0 A0A024RCR9;Q06587;B4DVB5 A0A024RCR9 A0A024RCR9 RING1 E3 ubiquitin-protein ligase RING1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.3187 2 671.318122 1340.62169 76811.7 0.39174 0.00026298 0.45532 0.00030567 0.84706 0.00056865 671.31840492938 676.322609924321 100.37 0.41228 100.37 100.17 100.58 0 114 36 4 0 0 0 0.036293 1 56746 36.585 33.329 1 1.4439 1.2125 0 4269200 1536600 2732600 10598 369 4026 4138 16570 16570 FCSDCIVTALR 11 0 1 Unmodified _FCSDCIVTALR_ 0 0 0 A0A024RCR9;Q06587;B4DVB5 A0A024RCR9 A0A024RCR9 RING1 E3 ubiquitin-protein ligase RING1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.3184 2 671.318122 1340.62169 78208.68 0.46703 0.00031353 0.1952 0.00013104 0.66223 0.00044457 671.31816028286 676.322470055714 100.24 0.52374 100.24 100.02 100.54 7.6294E-06 108 41 4 0 0 0 0.0251 1 55800 41.399 36.948 1 1.1969 1.0391 0 4306100 2120100 2186000 10599 369 4026 4138 16571 16571 FCSSSCITAYK 11 1 0 Unmodified _FCSSSCITAYK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.2991 2 662.28903 1322.56351 NaN NaN NaN 1.1176 0.00074014 NaN NaN NaN NaN 46.261 0.17908 46.261 46.19 46.369 0 0 0 0 0.011973 1 25495 56.632 35.126 1 NaN NaN 0 3300800 0 3300800 10600 1835 4027 4139 16572 16572 FCTGLTQIETLFK 13 1 0 Unmodified _FCTGLTQIETLFK_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.4097 2 779.402709 1556.79087 69520.55 0.90631 0.00070638 -0.45191 -0.00035222 0.4544 0.00035416 779.401490765384 783.409579643647 123.32 0.67728 123.32 123.1 123.78 0 161 51 5 0 0 0 2.3429E-05 2 79873 123.51 117.41 1 3.4216 3.5768 0 11924000 3278700 8645700 10601 557 4028 4140 16573;16574 16573 FCTGLTQIETLFK 13 1 0 Unmodified _FCTGLTQIETLFK_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.4113 2 779.402709 1556.79087 69990.93 1.0804 0.00084204 -0.62178 -0.00048462 0.45859 0.00035742 779.90362007193 783.409281283759 122.83 0.45085 122.83 122.59 123.04 7.6294E-06 138 34 5 0 0 0 0.0014441 1 81385 69.01 69.01 1 4.2309 4.252 0 13627000 2507200 11119000 10602 557 4028 4140 16575 16575 FCVTWNTNSR 10 0 1 Unmodified _FCVTWNTNSR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.7938 2 642.793129 1283.5717 74196.01 0.47042 0.00030238 0.58247 0.00037441 1.0529 0.00067679 642.793481202923 647.797698113956 80.029 0.56292 80.029 79.765 80.328 -7.6294E-06 129 34 6 0 0 0 0.046373 1 43135 36.693 31.91 1 1.2153 1.0428 0 6266400 2641900 3624600 10603 1698 4029 4141 16576 16576 FCVTWNTNSR 10 0 1 Unmodified _FCVTWNTNSR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.7933 2 642.793129 1283.5717 74571.7 0.5385 0.00034614 0.29279 0.0001882 0.83129 0.00053435 642.793359583045 647.797629299458 80.28 0.50685 80.28 80.001 80.508 0 122 28 6 0 0 0 0.017404 1 42450 47.869 43.085 1 1.1604 0.96277 0 5298000 2156700 3141300 10604 1698 4029 4141 16577 16577 FDAGELITQR 10 0 1 Unmodified _FDAGELITQR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;Q9BSE8 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB;ZNF607 Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.303 2 575.29857 1148.58259 80208.72 0.64313 0.00036999 0.11827 6.8041E-05 0.7614 0.00043803 575.298568394992 580.302742579967 79.484 1.1032 79.484 79.116 80.22 0 545 96 8 0 0 0 1.5827E-09 2 47014 131.22 92.215 1 1.3907 1.645 0 296460000 121850000 174610000 10605 730 4030 4142 16578;16579 16578 FDAGELITQR 10 0 1 Unmodified _FDAGELITQR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;Q9BSE8 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB;ZNF607 Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.2988 2 575.29857 1148.58259 80097.99 0.44815 0.00025782 0.062604 3.6016E-05 0.51075 0.00029383 575.29856726897 580.302727331348 78.546 1.1636 78.546 78.112 79.276 0 582 100 9 0 0 0 8.811E-12 3 47495 140.11 108.81 1 1.3883 1.6189 0 488630000 210780000 277850000 10606 730 4030 4142 16580;16581;16582 16581 FDAGELITQR 10 0 1 Unmodified _FDAGELITQR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;Q9BSE8 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB;ZNF607 Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.3036 2 575.29857 1148.58259 80513.16 0.6118 0.00035197 0.20194 0.00011618 0.81375 0.00046815 575.298675916604 580.302747576642 90.646 1.1023 90.646 90.272 91.374 7.6294E-06 354 67 9 0 0 0 0.0022162 3 50445 70.1 61.237 1 2.3834 2.0233 0 33278000 9835300 23443000 10607 730 4030 4142 16583;16584;16585 16585 FDAGELITQR 10 0 1 Unmodified _FDAGELITQR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;Q9BSE8 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB;ZNF607 Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.3026 2 575.29857 1148.58259 80237.3 0.34306 0.00019736 -0.049137 -2.8268E-05 0.29392 0.00016909 575.298489416976 580.302636865289 90.673 1.1128 90.673 90.284 91.397 0 298 68 8 0 0 0 0.0051694 3 49296 60.518 48.162 1 2.4153 2.1069 0 29331000 8520600 20810000 10608 730 4030 4142 16586;16587;16588 16586 FDASFFGVHPK 11 1 0 Unmodified _FDASFFGVHPK_ 0 0 0 A0A0U1RQF0;P49327;A0A0U1RRG3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.3104 2 626.31148 1250.60841 78606.48 0.5699 0.00035694 -0.066181 -4.145E-05 0.50372 0.00031549 626.311092509549 630.318906204046 82.304 0.70831 82.304 82.003 82.711 0 230 61 6 0 0 0 0.00038966 1 50286 82.287 76.746 1 1.85 1.9474 0 19778000 8481100 11297000 10609 587 4031 4143 16589 16589 FDASFFGVHPK 11 1 0 Unmodified _FDASFFGVHPK_ 0 0 0 A0A0U1RQF0;P49327;A0A0U1RRG3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.3101 2 626.31148 1250.60841 87686.98 0.69579 0.00043578 -1.1349 -0.00071081 -0.43912 -0.00027503 626.310329335872 630.317827903676 94.983 0.47749 94.983 94.818 95.295 7.6294E-06 108 34 5 0 0 0 0.031222 1 53277 38.276 34.122 1 0.80828 0.68311 0 1997700 1039300 958420 10610 587 4031 4143 16590 16590 FDDAVVQSDMK 11 1 0 Oxidation (M) _FDDAVVQSDM(ox)K_ FDDAVVQSDM(1)K FDDAVVQSDM(57.79)K 0 1 0 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.7838 2 635.784635 1269.55472 NaN NaN NaN -0.6486 -0.00041237 NaN NaN NaN NaN 38.306 0.44901 38.306 38.075 38.524 -3.8147E-06 0 0 0 0.0034449 1 19536 57.785 40.554 1 NaN NaN 0 8408600 8408600 0 10611 1467;1248 4032 4144 16591 16591 956 FDDDVVSR 8 0 1 Unmodified _FDDDVVSR_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5;F5H2X1;B7Z842 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.7225 2 476.722164 951.429775 NaN NaN NaN 0.54969 0.00026205 NaN NaN NaN NaN 37.376 0.57415 37.376 37.119 37.693 -3.8147E-06 0 0 0 0.015948 1 19406 67.993 56.624 1 NaN NaN 0 13152000 13152000 0 10612 1954 4033 4145 16592 16592 FDDGAGGDNEVQR 13 0 1 Unmodified _FDDGAGGDNEVQR_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.295 2 690.294744 1378.57494 73973.73 0.59295 0.00040931 0.23488 0.00016213 0.82783 0.00057145 690.294827837119 695.298946728673 24.408 0.40213 24.408 24.192 24.594 0 71 15 7 0 0 0 2.7519E-13 2 10083 126.19 113.67 1 2.3682 2.4624 0 38065000 11999000 26066000 10613 620 4034 4146 16593;16594 16594 FDDGAGGDNEVQR 13 0 1 Unmodified _FDDGAGGDNEVQR_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.2991 2 690.294744 1378.57494 73740.66 0.30776 0.00021245 0.11307 7.8049E-05 0.42083 0.00029049 690.294707725291 695.298929856225 24.097 0.45648 24.097 23.904 24.36 -1.9073E-06 81 17 7 0 0 0 2.758E-24 2 9864 161.67 153.14 1 2.3018 2.5174 0 30586000 9986200 20599000 10614 620 4034 4146 16595;16596 16596 FDDGAGGDNEVQR 13 0 1 Unmodified _FDDGAGGDNEVQR_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 695.2984 2 690.294744 1378.57494 73032.73 0.46094 0.00031818 -0.070692 -4.8798E-05 0.39025 0.00026938 690.294605032391 695.298843823645 27.471 0.46378 27.471 27.292 27.756 0 79 18 6 0 0 0 0.0003313 2 10663 64.121 59.67 1 1.2999 1.1253 0 2598300 1101000 1497300 10615 620 4034 4146 16597;16598 16597 FDDGAGGDNEVQR 13 0 1 Unmodified _FDDGAGGDNEVQR_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 695.299 2 690.294744 1378.57494 73536.45 0.19587 0.00013521 0.26872 0.0001855 0.46459 0.0003207 690.294924292007 695.298983691404 27.732 0.53835 27.732 27.504 28.042 1.9073E-06 100 23 8 0 0 0 0.0018921 2 10342 55.98 51.819 1 1.2452 1.0737 0 2746400 1140000 1606400 10616 620 4034 4146 16599;16600 16599 FDDLSGEYNPEVFDK 15 1 0 Unmodified _FDDLSGEYNPEVFDK_ 0 0 0 B2R9K5;Q96EU6 B2R9K5 B2R9K5 RRP36 Ribosomal RNA processing protein 36 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.3965 2 887.893957 1773.77336 NaN NaN NaN 0.59806 0.00053102 NaN NaN NaN NaN 94.872 0.21414 94.872 94.787 95.001 0 0 0 0 0.015584 1 57654 62.338 57.822 1 NaN NaN 0 6167500 6167500 0 10617 867 4035 4147 16601 16601 FDDLSGEYNPEVFDK 15 1 0 Unmodified _FDDLSGEYNPEVFDK_ 0 0 0 B2R9K5;Q96EU6 B2R9K5 B2R9K5 RRP36 Ribosomal RNA processing protein 36 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.8934 2 887.893957 1773.77336 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.244 1 94.244 93.744 94.744 0 0 0 0 0.007509 1 58563 62.14 47.168 1 10618 867 4035 4147 16602 16602 FDDLSGEYNPEVFDK 15 1 0 Unmodified _FDDLSGEYNPEVFDK_ 0 0 0 B2R9K5;Q96EU6 B2R9K5 B2R9K5 RRP36 Ribosomal RNA processing protein 36 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 887.8951 2 887.893957 1773.77336 63439.89 0.62444 0.00055444 -0.37117 -0.00032956 0.25327 0.00022488 887.893423964575 891.900629305337 107.98 0.61823 107.98 107.78 108.4 0 105 32 5 0 0 0 0.024018 1 61928 29.689 29.205 1 0.9803 0.76796 0 3199800 1879600 1320100 10619 867 4035 4147 16603 16603 FDDPGLMLMGFK 12 1 0 2 Oxidation (M) _FDDPGLM(ox)LM(ox)GFK_ FDDPGLM(1)LM(1)GFK FDDPGLM(57.86)LM(57.86)GFK 0 2 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.83 2 701.822706 1401.63086 72348.11 0.90714 0.00063665 -0.0065428 -4.5919E-06 0.90059 0.00063206 701.822795134567 705.829953883505 98.481 0.77061 98.481 98.072 98.843 0 342 62 7 0 0 0 0.003255 2 60043 57.859 57.859 1 0.83848 0.94501 0 75651000 42647000 33004000 10620 82 4036 4148 16604;16605 16605 76;77 FDDPGLMLMGFK 12 1 0 2 Oxidation (M) _FDDPGLM(ox)LM(ox)GFK_ FDDPGLM(1)LM(1)GFK FDDPGLM(71.35)LM(71.35)GFK 0 2 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.83 2 701.822706 1401.63086 73325.3 0.49543 0.0003477 -0.13837 -9.7108E-05 0.35706 0.0002506 701.822792921797 705.829967018022 97.752 0.7371 97.752 97.41 98.147 0 321 59 8 0 0 0 0.00049382 1 61001 71.349 71.349 1 0.82513 0.88031 0 36636000 18671000 17965000 10621 82 4036 4148 16606 16606 76;77 FDDPLLGPR 9 0 1 Unmodified _FDDPLLGPR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;B3KXA9 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.2721 2 515.271824 1028.5291 87685.3 0.43502 0.00022415 0.32827 0.00016915 0.76329 0.0003933 515.271968965748 520.275925898997 83.221 0.66565 83.221 82.829 83.494 0 168 49 4 0 0 0 0.032931 1 50844 52.937 52.937 1 1.645 1.6504 0 17473000 7584700 9888000 10622 883 4037 4149 16607 16607 FDDPLLGPR 9 0 1 Unmodified _FDDPLLGPR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;B3KXA9 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.2725 2 515.271824 1028.5291 89830.27 0.20426 0.00010525 0.6184 0.00031865 0.82266 0.00042389 515.272179333546 520.276070774814 95.635 0.63939 95.635 95.377 96.016 0 108 43 4 0 0 0 0.060377 1 52767 43.769 43.769 1 0.80173 0.70125 0 1387000 776440 610520 10623 883 4037 4149 16608 16608 FDDVTSEDTR 10 0 1 Unmodified _FDDVTSEDTR_ 0 0 0 B4DIS6;Q9H6R0;I3L1L6 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.7561 2 592.756932 1183.49931 79395.18 0.5511 0.00032667 -0.014197 -8.4153E-06 0.53691 0.00031826 592.756833996278 597.760887193484 28.46 0.37234 28.46 28.278 28.65 0 103 24 6 0 0 0 0.012825 1 13546 50.108 33.568 1 1.3182 1.3728 0 21748000 8319500 13428000 10624 983 4038 4150 16609 16609 FDDVTSEDTR 10 0 1 Unmodified _FDDVTSEDTR_ 0 0 0 B4DIS6;Q9H6R0;I3L1L6 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.7614 2 592.756932 1183.49931 79606.53 0.59445 0.00035236 0.20469 0.00012133 0.79914 0.00047369 592.756818942556 597.760860545154 27.896 0.51781 27.896 27.558 28.076 1.9073E-06 103 29 6 0 0 0 2.0735E-08 3 13131 121.73 73.884 1 1.1527 1.2329 0 24951000 11659000 13292000 10625 983 4038 4150 16610;16611;16612 16612 FDDVTSEDTR 10 0 1 Unmodified _FDDVTSEDTR_ 0 0 0 B4DIS6;Q9H6R0;I3L1L6 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.7613 2 592.756932 1183.49931 77872.29 0.29884 0.00017714 0.909 0.00053882 1.2078 0.00071596 592.757104757939 597.761190792897 32.331 0.56614 32.331 32.128 32.694 0 108 27 7 0 0 0 0.0025324 1 13901 68.657 48.87 1 1.249 1.062 0 5318800 2357100 2961700 10626 983 4038 4150 16613 16613 FDEFDEAIDEAIEDDIK 17 1 0 Unmodified _FDEFDEAIDEAIEDDIK_ 0 0 0 Q96T23;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1011.4536 2 1007.44421 2012.87386 62024.14 0.84444 0.00085073 -0.0057172 -5.7597E-06 0.83872 0.00084497 1007.94572452795 1011.45139978301 126.77 0.57163 126.77 126.55 127.13 7.6294E-06 197 36 7 0 0 0 5.8213E-05 3 82432 76.073 76.073 1 0.42901 0.42096 0 20499000 14266000 6233200 10627 1991 4039 4151 16614;16615;16616 16616 FDEFDEAIDEAIEDDIK 17 1 0 Unmodified _FDEFDEAIDEAIEDDIK_ 0 0 0 Q96T23;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1011.4545 2 1007.44421 2012.87386 62206.37 0.7519 0.00075749 0.15144 0.00015256 0.90333 0.00091006 1007.94590364872 1011.45149388141 126.49 0.65645 126.49 126.22 126.88 7.6294E-06 215 40 9 0 0 0 1.1156E-12 3 84278 118.37 118.37 1 0.44129 0.46558 0 23718000 14988000 8729700 10628 1991 4039 4151 16617;16618;16619 16619 FDEGEDGEGDFLVVGSIR 18 0 1 Unmodified _FDEGEDGEGDFLVVGSIR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.9481 2 970.947252 1939.87995 NaN NaN NaN -0.76589 -0.00074364 NaN NaN NaN NaN 111.05 0.356 111.05 110.8 111.16 0 0 0 0 0.0025999 1 71513 51.211 45.366 1 NaN NaN 0 3518600 3518600 0 10629 2080 4040 4152 16620 16620 FDEGEDGEGDFLVVGSIR 18 0 1 Unmodified _FDEGEDGEGDFLVVGSIR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.9523 2 970.947252 1939.87995 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.06 1 111.06 110.56 111.56 0 0 0 0 0.014864 1 71591 43.382 37.279 1 10630 2080 4040 4152 16621 16621 FDEGEDGEGDFLVVGSIR 18 0 1 Unmodified _FDEGEDGEGDFLVVGSIR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 975.9562 2 970.947252 1939.87995 NaN NaN NaN 1.5662 0.0015207 NaN NaN NaN NaN 122.49 0.46252 122.49 122.23 122.69 7.6294E-06 0 0 0 0.041062 1 73027 31.526 26.349 1 NaN NaN 0 1803000 0 1803000 10631 2080 4040 4152 16622 16622 FDEGEDGEGDFLVVGSIR 18 0 1 Unmodified _FDEGEDGEGDFLVVGSIR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.9501 2 970.947252 1939.87995 61957.5 0.41731 0.00040519 1.2809 0.0012437 1.6982 0.0016489 970.948603061979 975.951141547724 122.33 0.44668 122.33 122.14 122.59 -7.6294E-06 68 22 6 0 0 0 0.028242 1 72072 23.362 23.362 1 1.924 1.6931 0 3627500 1052500 2575000 10632 2080 4040 4152 16623 16623 FDEHDGPVR 9 0 1 Unmodified _FDEHDGPVR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 361.1694 3 357.833317 1070.47812 102450.4 0.066431 2.3771E-05 0.1058 3.7859E-05 0.17223 6.163E-05 357.833309662896 361.169368781592 21.131 0.30229 21.131 20.935 21.237 0 62 14 7 0 0 0 0.031829 1 7454 30.189 30.189 1 1.4156 1.4391 0 9862500 4309100 5553400 10633 1607 4041 4153 16624 16624 FDEHDGPVR 9 0 1 Unmodified _FDEHDGPVR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 361.1689 3 357.833317 1070.47812 100968.6 0.059885 2.1429E-05 0.21264 7.6091E-05 0.27253 9.752E-05 358.167605909528 361.169419422419 20.904 0.37483 20.904 20.697 21.071 0 60 15 6 0 0 0 0.015182 1 7141 38.303 38.303 1 1.2321 1.2253 0 8318800 3769600 4549300 10634 1607 4041 4153 16625 16625 FDEHDGPVR 9 0 1 Unmodified _FDEHDGPVR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.2504 2 536.246338 1070.47812 83359.35 0.36089 0.00019353 0.50172 0.00026905 0.86261 0.00046257 536.246546284534 541.250671193957 20.942 0.35285 20.942 20.697 21.049 0 55 14 5 0 0 0 0.0062552 1 7166 55.37 55.37 1 1.0641 1.0668 0 9167800 4388900 4778900 10635 1607 4041 4153 16626 16626 FDEISFVNFAR 11 0 1 Unmodified _FDEISFVNFAR_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.8339 2 672.832777 1343.651 73608.59 0.89533 0.00060241 0.18536 0.00012471 1.0807 0.00072712 672.832981500366 677.837029466956 113.38 1.3656 113.38 112.86 114.23 7.6294E-06 579 99 10 0 0 0 7.3902E-08 3 71496 113.62 101.58 1 0.70006 0.82826 0 316290000 190180000 126110000 10636 167 4042 4154 16627;16628;16629 16628 FDEISFVNFAR 11 0 1 Unmodified _FDEISFVNFAR_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.833 2 672.832777 1343.651 NaN NaN NaN -0.084621 -5.6936E-05 NaN NaN NaN NaN 114.37 0.42929 114.37 114.21 114.64 0 0 0 0 0.0070774 1 72767 62.823 48.149 1 NaN NaN 0 2989700 2989700 0 10637 167 4042 4154 16630 16630 FDEISFVNFAR 11 0 1 Unmodified _FDEISFVNFAR_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3343 2 672.832777 1343.651 73930.38 0.69601 0.0004683 0.35143 0.00023646 1.0474 0.00070475 672.833130651309 677.837097058616 112.68 1.3395 112.68 112.3 113.64 0 566 93 10 0 0 0 8.4085E-06 4 72775 109.44 102.54 1 0.71795 0.83286 0 320960000 189010000 131950000 10638 167 4042 4154 16631;16632;16633;16634 16632 FDEISFVNFAR 11 0 1 Unmodified _FDEISFVNFAR_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.8325 2 672.832777 1343.651 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.89 1 113.89 113.39 114.39 0 0 0 0 0.0058682 1 73996 64.04 23.995 1 10639 167 4042 4154 16635 16635 FDEISFVNFAR 11 0 1 Unmodified _FDEISFVNFAR_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.335 2 672.832777 1343.651 73322.27 0.75456 0.00050769 -0.14936 -0.0001005 0.6052 0.0004072 672.832815927501 677.836803477254 124.38 1.5399 124.38 124.02 125.56 0 361 64 10 0 0 0 4.1815E-05 3 74351 99.653 87.606 1 0.94883 0.8189 0 84221000 44493000 39728000 10640 167 4042 4154 16636;16637;16638 16637 FDEISFVNFAR 11 0 1 Unmodified _FDEISFVNFAR_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.3348 2 672.832777 1343.651 73192.15 0.72213 0.00048588 -0.10552 -7.0994E-05 0.61662 0.00041488 672.832825781958 677.836817528935 124.16 1.6872 124.16 123.78 125.47 0 365 72 10 0 0 0 4.5423E-08 4 73316 118.18 106.13 1 0.93008 0.81175 0 80169000 39225000 40943000 10641 167 4042 4154 16639;16640;16641;16642 16641 FDENYAFLHR 10 0 1 Unmodified _FDENYAFLHR_ 0 0 0 W0HJ78;B0QYD3;Q9UH17 W0HJ78 W0HJ78 APOBEC3B DNA dC->dU-editing enzyme APOBEC-3B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.2122 3 437.875405 1310.60439 92530.58 0.18406 8.0594E-05 -0.16047 -7.0264E-05 0.023591 1.033E-05 437.875274468388 441.211294448579 67.948 0.69061 67.948 67.691 68.381 0 176 58 5 0 0 0 0.017646 1 39317 28.204 25.691 1 0.47786 0.5004 0 10874000 7433800 3439800 10642 807 4043 4155 16643 16643 FDENYAFLHR 10 0 1 Unmodified _FDENYAFLHR_ 0 0 0 W0HJ78;B0QYD3;Q9UH17 W0HJ78 W0HJ78 APOBEC3B DNA dC->dU-editing enzyme APOBEC-3B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2117 3 437.875405 1310.60439 92727.22 0.22324 9.7751E-05 -0.3434 -0.00015037 -0.12016 -5.2617E-05 437.875265650253 441.211242582113 66.54 0.58963 66.54 66.313 66.903 0 176 48 5 0 0 0 0.039149 1 39330 20.777 15.462 1 0.517 0.51835 0 17296000 11131000 6164600 10643 807 4043 4155 16644 16644 FDETEQALANER 12 0 1 Unmodified _FDETEQALANER_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.8335 2 711.82842 1421.64229 73112.42 1.0212 0.00072695 1.1774 0.00083808 2.1986 0.001565 711.828289189429 716.832377917803 48.742 0.60953 48.742 48.471 49.081 3.8147E-06 211 46 8 0 0 0 8.9107E-18 2 26604 141.1 121.99 1 1.7222 1.7618 0 33311000 17268000 16043000 10644 511 4044 4156 16645;16646 16646 FDETEQALANER 12 0 1 Unmodified _FDETEQALANER_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.8311 2 711.82842 1421.64229 73723.53 0.55875 0.00039774 0.31069 0.00022116 0.86944 0.00061889 711.828614248802 717.334386801 47.577 0.70553 47.577 47.226 47.932 0 141 48 4 0 0 0 1.6203E-05 2 26661 105.17 100.47 1 1.8106 1.938 0 25048000 10585000 14463000 10645 511 4044 4156 16647;16648 16648 FDETEQALANER 12 0 1 Unmodified _FDETEQALANER_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 711.8297 2 711.82842 1421.64229 74408.05 0.72456 0.00051576 0.18904 0.00013456 0.91359 0.00065032 711.828809497361 716.832648682774 56.779 0.48083 56.779 56.581 57.062 0 117 32 5 0 0 0 0.027775 1 28664 36.284 36.284 1 1.0804 0.94299 0 1879400 897010 982410 10646 511 4044 4156 16649 16649 FDEVLIR 7 0 1 Unmodified _FDEVLIR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2515 2 446.25036 890.486168 90825.7 -0.00047266 -2.1092E-07 0.10125 4.5183E-05 0.10078 4.4972E-05 446.250358634355 451.254381649661 72.709 0.44434 72.709 72.598 73.043 0 105 33 6 0 0 0 0.011218 2 42591 108.98 49.342 1 1.2273 1.325 0 48448000 20427000 28021000 10647 1088;1189 4045 4157 16650;16651 16650 FDEVLIR 7 0 1 Unmodified _FDEVLIR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.2545 2 446.25036 890.486168 90724.48 -0.28788 -0.00012847 0.12693 5.6642E-05 -0.16095 -7.1823E-05 446.250391584144 451.254489700847 71.376 0.39198 71.376 71.251 71.643 -7.6294E-06 111 29 6 0 0 0 0.017423 1 42765 97.071 46.105 1 1.3656 1.5872 0 63032000 27398000 35634000 10648 1088;1189 4045 4157 16652 16652 FDEVLIR 7 0 1 Unmodified _FDEVLIR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 451.2545 2 446.25036 890.486168 90308.12 0.0064591 2.8824E-06 0.36605 0.00016335 0.37251 0.00016623 446.250657021508 451.254568510819 83.097 0.40005 83.097 82.876 83.276 0 77 22 5 0 0 0 0.047715 1 45258 56.122 18.476 1 1.8213 1.5715 0 2643700 877590 1766100 10649 1088;1189 4045 4157 16653 16653 FDFPVSYLPGPVK 13 1 0 Unmodified _FDFPVSYLPGPVK_ 0 0 0 H7BXF4;B1PBA3;Q9NXE4;C9J647;B4DTS0;B4E0A6;B4E3P9;B4DEV6 H7BXF4 H7BXF4 SMPD4 Sphingomyelin phosphodiesterase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.3905 2 733.389928 1464.7653 75509.57 0.86146 0.00063179 1.1664 0.00085543 2.0279 0.0014872 733.391018696775 737.397857145806 119.47 0.41039 119.47 119.23 119.64 0 76 29 5 0 0 0 0.0032736 1 78808 50.353 50.353 1 1.0588 1.0739 0 5269100 2907300 2361800 10650 822 4046 4158 16654 16654 FDHVPLATPNGDVLIR 16 0 1 Unmodified _FDHVPLATPNGDVLIR_ 0 0 0 B4DL07;P28288;B4DZ22 B4DL07 B4DL07 ABCD3 ATP-binding cassette sub-family D member 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.9897 3 588.652816 1762.93662 85311.73 1.1412 0.00067175 -0.49475 -0.00029123 0.64643 0.00038052 588.986448977228 591.988614711391 95.628 0.66833 95.628 95.373 96.041 0 117 53 5 0 0 0 0.02542 1 59460 20.737 20.737 1 1.9581 1.9545 0 8990400 3253700 5736700 10651 994 4047 4159 16655 16655 FDLALAATEAR 11 0 1 Unmodified _FDLALAATEAR_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.3185 2 589.31422 1176.61389 77819.24 0.79327 0.00046748 -0.7199 -0.00042425 0.073365 4.3235E-05 589.313250840945 594.318207179893 92.015 0.52504 92.015 91.709 92.234 0 153 47 4 0 0 0 0.00032579 1 55681 87.298 40.1 1 1.4943 1.5018 0 15949000 5700200 10249000 10652 765 4048 4160 16656 16656 FDLALAATEAR 11 0 1 Unmodified _FDLALAATEAR_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.3179 2 589.31422 1176.61389 80010.17 0.95933 0.00056535 -0.77537 -0.00045694 0.18397 0.00010841 589.313286915565 594.318143730789 91.074 0.51124 91.074 90.862 91.373 0 132 44 4 0 0 0 0.00026131 1 56321 90.149 52.063 1 1.4473 1.5777 0 29464000 12883000 16581000 10653 765 4048 4160 16657 16657 FDLIGLEGR 9 0 1 Unmodified _FDLIGLEGR_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;G1UI29;A0A087X0E3;B3KN63 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.2792 2 510.279649 1018.54475 NaN NaN NaN -0.2468 -0.00012594 NaN NaN NaN NaN 100.9 0.54176 100.9 100.56 101.1 0 0 0 0 0.045667 1 61897 48.423 28.637 1 NaN NaN 0 6092500 6092500 0 10654 476 4049 4161 16658 16658 FDLIGLEGR 9 0 1 Unmodified _FDLIGLEGR_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;G1UI29;A0A087X0E3;B3KN63 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.2836 2 510.279649 1018.54475 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.79 1 100.79 100.29 101.29 0 0 0 0 0.0068692 1 61846 66.692 40.09 1 10655 476 4049 4161 16659 16659 FDLIGLEGR 9 0 1 Unmodified _FDLIGLEGR_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;G1UI29;A0A087X0E3;B3KN63 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.325 2 510.279649 1018.54475 NaN NaN NaN -0.095028 -4.8491E-05 NaN NaN NaN NaN 100.23 0.70767 100.23 99.783 100.49 7.6294E-06 0 0 0 0.052695 1 62986 46.158 29.382 1 NaN NaN 0 7933900 7933900 0 10656 476 4049 4161 16660 16660 FDLLEELVAK 10 1 0 Unmodified _FDLLEELVAK_ 0 0 0 H7C0V0;A0A024R3U8;Q8WWC4 H7C0V0 H7C0V0 C2orf47;FLJ22555 Uncharacterized protein C2orf47, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8373 2 588.829172 1175.64379 85572.78 0.85255 0.00050201 -0.02142 -1.2613E-05 0.83113 0.0004894 588.828955847233 592.836328658483 123.86 0.37555 123.86 123.65 124.02 7.6294E-06 81 26 4 0 0 0 0.0091807 1 80328 55.064 40.397 1 1.923 2.0603 0 3579400 1461600 2117800 10657 140 4050 4162 16661 16661 FDLLEELVAK 10 1 0 Unmodified _FDLLEELVAK_ 0 0 0 H7C0V0;A0A024R3U8;Q8WWC4 H7C0V0 H7C0V0 C2orf47;FLJ22555 Uncharacterized protein C2orf47, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.8373 2 588.829172 1175.64379 82604.95 0.86263 0.00050794 -0.14318 -8.4309E-05 0.71945 0.00042363 588.828938430757 592.836286124095 123.38 0.48397 123.38 123.14 123.62 0 97 36 4 0 0 0 0.00126 1 81943 74.464 59.314 1 1.4547 1.6043 0 2953400 1623100 1330300 10658 140 4050 4162 16662 16662 FDLLWLIQDRPDR 13 0 2 Unmodified _FDLLWLIQDRPDR_ 0 0 1 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.9715 3 562.970256 1685.88894 82964.22 1.1616 0.00065393 -0.50101 -0.00028205 0.66056 0.00037188 562.970019913443 569.642190842021 125.4 0.41018 125.4 125.18 125.59 7.6294E-06 80 26 5 0 0 0 0.0048342 2 81458 41.644 37.096 1 1.0588 1.1936 0 5160600 2536100 2624500 10659 560 4051 4163 16663;16664 16664 FDLLWLIQDRPDR 13 0 2 Unmodified _FDLLWLIQDRPDR_ 0 0 1 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.9704 3 562.970256 1685.88894 82685.13 1.1657 0.00065624 -0.44038 -0.00024792 0.72529 0.00040832 562.969819898686 569.642063292477 124.85 0.45856 124.85 124.61 125.07 0 118 32 5 0 0 0 0.0064825 2 83017 37.613 37.613 1 0.90018 0.8857 0 5752000 3963100 1788900 10660 560 4051 4163 16665;16666 16665 FDLMYAK 7 1 0 Oxidation (M) _FDLM(ox)YAK_ FDLM(1)YAK FDLM(64.8)YAK 0 1 0 A6NHL2;B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q15670;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 A6NHL2;B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBAL3;TUBA1B;TUBA1C;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha chain-like 3;Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.217 2 452.217672 902.42079 90070.59 -0.019784 -8.9467E-06 0.078355 3.5434E-05 0.058571 2.6487E-05 452.217620897882 456.224714229573 58.703 1.4021 58.703 58.034 59.436 0 529 112 8 0 0 0 0.015941 2 33097 64.803 34.618 1 2.1722 2.5243 0 250810000 85097000 165710000 10661 922;1257;1659;1869;682 4052 4164 16667;16668 16668 529 FDLMYAK 7 1 0 Oxidation (M) _FDLM(ox)YAK_ FDLM(1)YAK FDLM(58.6)YAK 0 1 0 A6NHL2;B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q15670;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 A6NHL2;B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBAL3;TUBA1B;TUBA1C;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha chain-like 3;Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 911.4456 1 903.428067 902.42079 63415.52 0.46476 0.00041988 0.28746 0.0002597 0.75222 0.00067957 903.427029275079 911.442510741737 58.729 0.33057 58.729 58.544 58.874 0 66 27 4 0 0 0 0.0090521 1 33251 58.604 32.71 1 2.6104 2.6153 0 9830300 2602200 7228100 10662 922;1257;1659;1869;682 4052 4164 16669 16669 529 FDLMYAK 7 1 0 Oxidation (M) _FDLM(ox)YAK_ FDLM(1)YAK FDLM(65.67)YAK 0 1 0 A6NHL2;B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q15670;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 A6NHL2;B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBAL3;TUBA1B;TUBA1C;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha chain-like 3;Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.2179 2 452.217672 902.42079 89332.02 0.18268 8.2613E-05 0.16159 7.3073E-05 0.34427 0.00015569 452.217690063662 456.224700774693 57.737 1.1672 57.737 57.106 58.274 -3.8147E-06 480 92 6 0 0 0 0.015677 2 33216 65.672 33.202 1 2.1714 2.5349 0 271610000 89233000 182370000 10663 922;1257;1659;1869;682 4052 4164 16670;16671 16671 529 FDLQNPSR 8 0 1 Unmodified _FDLQNPSR_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.7469 2 488.745973 975.477394 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.412 1 44.412 43.912 44.912 -3.8147E-06 0 0 0 0.0089411 1 24251 78.324 59.785 1 10664 1798 4053 4165 16672 16672 FDNIGMNAMANK 12 1 0 2 Oxidation (M) _FDNIGM(ox)NAM(ox)ANK_ FDNIGM(1)NAM(1)ANK FDNIGM(64.84)NAM(64.84)ANK 0 2 0 Q03701 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.3057 2 679.297387 1356.58022 75983.85 0.73944 0.0005023 -0.45466 -0.00030885 0.28478 0.00019345 679.296877697931 683.304483860128 28.057 0.35669 28.057 27.874 28.23 -1.9073E-06 104 25 5 0 0 0 0.0010185 1 13081 64.841 63.58 1 1.5977 1.6498 0 12782000 4731600 8050200 10665 1683 4054 4166 16673 16673 1500;1501 FDNIGMNAMANK 12 1 0 2 Oxidation (M) _FDNIGM(ox)NAM(ox)ANK_ FDNIGM(1)NAM(1)ANK FDNIGM(85.81)NAM(85.81)ANK 0 2 0 Q03701 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.3049 2 679.297387 1356.58022 73733.59 0.26864 0.00018249 -0.42613 -0.00028947 -0.15749 -0.00010698 679.297071080396 683.30430067979 27.542 0.37194 27.542 27.401 27.773 1.9073E-06 65 19 6 0 0 0 0.00028033 2 12792 86.898 84.204 1 1.9537 2.0662 0 23597000 10248000 13348000 10666 1683 4054 4166 16674;16675 16674 1500;1501 FDNLYCCR 8 0 1 Unmodified _FDNLYCCR_ 0 0 0 Q6ZMM9;Q2NKW8;H0Y8B3;Q6ZNS6;A0A024R0A8;V5YQL4;O43865;Q96HN2 Q6ZMM9 Q6ZMM9 AHCYL1;AHCYL2;FGFR2-AHCYL1 Adenosylhomocysteinase;Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.2413 2 574.236601 1146.45865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.494 1 45.494 44.994 45.994 3.8147E-06 0 0 0 0.0052919 1 24491 85.064 59.327 1 10667 40 4055 4167 16676 16676 FDNLYCCR 8 0 1 Unmodified _FDNLYCCR_ 0 0 0 Q6ZMM9;Q2NKW8;H0Y8B3;Q6ZNS6;A0A024R0A8;V5YQL4;O43865;Q96HN2 Q6ZMM9 Q6ZMM9 AHCYL1;AHCYL2;FGFR2-AHCYL1 Adenosylhomocysteinase;Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.241 2 574.236601 1146.45865 NaN NaN NaN -0.51285 -0.0002945 NaN NaN NaN NaN 44.603 0.57056 44.603 44.271 44.841 0 0 0 0 0.012455 1 24270 73.616 55.631 1 NaN NaN 0 3670900 0 3670900 10668 40 4055 4167 16677 16677 FDPNEIK 7 1 0 Unmodified _FDPNEIK_ 0 0 0 P30050;Q59FI9;D3DS95;Q76P68 P30050 P30050 RPL12;hCG_21173;cICK0721Q.2 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 431.7187 2 431.718893 861.423233 91517.92 0.14356 6.1976E-05 0.40713 0.00017577 0.55069 0.00023774 431.718800136836 435.726015305523 41.041 0.68946 41.041 40.631 41.32 0 250 57 8 0 0 0 0.030163 1 21517 69.176 11.008 1 0.8524 0.94797 0 60506000 32038000 28469000 10669 1532 4056 4168 16678 16678 FDPNEIK 7 1 0 Unmodified _FDPNEIK_ 0 0 0 P30050;Q59FI9;D3DS95;Q76P68 P30050 P30050 RPL12;hCG_21173;cICK0721Q.2 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.7263 2 431.718893 861.423233 91303.52 0.30588 0.00013205 0.31972 0.00013803 0.6256 0.00027008 431.718836088992 435.725942448799 39.965 0.54479 39.965 39.783 40.328 -3.8147E-06 184 47 6 0 0 0 0.027367 1 21239 73.637 14.95 1 0.79545 0.88919 0 101730000 54061000 47669000 10670 1532 4056 4168 16679 16679 FDQLFDDESDPFEVLK 16 1 0 Unmodified _FDQLFDDESDPFEVLK_ 0 0 0 Q63HR1;Q5VU21;D3DQ69;Q8NC51;D3DQ70 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 972.951 2 972.449096 1942.88364 62163.82 0.59485 0.00057846 0.0054706 5.3199E-06 0.60032 0.00058378 972.950534624012 976.456285424799 125.91 0.76129 125.91 125.59 126.35 -7.6294E-06 323 55 10 0 0 0 2.6748E-06 2 81821 91.62 85.961 1 2.0677 2.2215 0 39173000 12322000 26852000 10671 1832 4057 4169 16680;16681 16681 FDQLFDDESDPFEVLK 16 1 0 Unmodified _FDQLFDDESDPFEVLK_ 0 0 0 Q63HR1;Q5VU21;D3DQ69;Q8NC51;D3DQ70 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 976.4567 2 972.449096 1942.88364 62406.48 0.56702 0.0005514 0.00029686 2.8869E-07 0.56732 0.00055169 972.950586207752 976.456338633499 125.56 0.67581 125.56 125.31 125.99 7.6294E-06 289 44 10 0 0 0 1.1551E-05 2 83546 86.803 81.144 1 1.9217 2.1014 0 40528000 14390000 26138000 10672 1832 4057 4169 16682;16683 16682 FDQLLAEEK 9 1 0 Unmodified _FDQLLAEEK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0;O14729;O14794;Q68D89;A0A0C4DFM8;B4E177;A1L2Z2;P35580;Q7Z406 A0A024R1N1;P35580;Q7Z406 A0A024R1N1 MYH9;MYH11;DKFZp686D10126;MYH14;MYH10 Myosin-9;Myosin-11;Myosin-10;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.7895 2 546.782222 1091.54989 81812.54 0.29676 0.00016227 -0.3358 -0.00018361 -0.039037 -2.1345E-05 546.781790218629 550.789267035712 58.466 0.63174 58.466 58.172 58.804 3.8147E-06 118 51 4 0 0 0 0.0014132 2 33126 85.731 60.912 1 1.6001 1.6736 0 11969000 4728600 7239900 10673 81;1544;1875 4058 4170 16684;16685 16684 FDSEYER 7 0 1 Unmodified _FDSEYER_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;H0Y8T4 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2053 2 473.201064 944.387576 88203.76 -0.095752 -4.531E-05 0.0017354 8.2119E-07 -0.094017 -4.4489E-05 473.200949669493 478.20514393957 23.648 0.38868 23.648 23.46 23.849 0 68 17 5 0 0 0 0.020094 2 9454 94.407 89.552 1 1.3934 1.4366 0 36848000 15820000 21027000 10674 542 4059 4171 16686;16687 16686 FDSNEEDSASVFSPSFGLK 19 1 0 Unmodified _FDSNEEDSASVFSPSFGLK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1036.4738 2 1031.96564 2061.91673 58828.03 0.30368 0.00031339 -1.061 -0.0010949 -0.75728 -0.00078149 1032.46718944729 1036.47306174367 120.49 0.44378 120.49 120.18 120.62 0 94 19 9 0 0 0 0.005482 1 71483 31.389 31.389 1 1.106 0.87439 0 5137200 2634700 2502600 10675 1679 4060 4172 16688 16688 FDSNEEDSASVFSPSFGLK 19 1 0 Unmodified _FDSNEEDSASVFSPSFGLK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1036.4734 2 1031.96564 2061.91673 59862.64 0.59774 0.00061685 -0.82501 -0.00085138 -0.22726 -0.00023453 1032.4669800858 1036.97350562926 120.33 0.46963 120.33 120.05 120.52 0 120 25 8 0 0 0 0.00057169 1 70502 38.511 38.511 1 1.0062 0.82324 0 4832000 2420400 2411500 10676 1679 4060 4172 16689 16689 FDTGNLCMVTGGANLGR 17 0 1 Oxidation (M) _FDTGNLCM(ox)VTGGANLGR_ FDTGNLCM(1)VTGGANLGR FDTGNLCM(129.54)VTGGANLGR 0 1 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.9213 2 899.914178 1797.8138 63659.42 0.92097 0.00082879 -0.61833 -0.00055644 0.30264 0.00027235 899.914121198992 904.917882997429 84.776 0.82094 84.776 84.436 85.257 0 412 68 8 0 0 0 2.7803E-18 1 50670 129.54 129.54 1 1.4191 1.6257 0 132290000 53734000 78560000 10677 824 4061 4173 16690 16690 652 FDTGNLCMVTGGANLGR 17 0 1 Oxidation (M) _FDTGNLCM(ox)VTGGANLGR_ FDTGNLCM(1)VTGGANLGR FDTGNLCM(85.84)VTGGANLGR 0 1 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.9172 2 899.914178 1797.8138 63760.76 0.82328 0.00074088 -0.36729 -0.00033053 0.45599 0.00041035 900.41571834744 904.918085581292 84.087 0.86199 84.087 83.669 84.531 0 403 71 8 0 0 0 4.5124E-06 2 51349 85.845 85.845 1 1.4302 1.6309 0 138860000 62492000 76369000 10678 824 4061 4173 16691;16692 16692 652 FDTGNLCMVTGGANLGR 17 0 1 Oxidation (M) _FDTGNLCM(ox)VTGGANLGR_ FDTGNLCM(1)VTGGANLGR FDTGNLCM(53.75)VTGGANLGR 0 1 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 899.9147 2 899.914178 1797.8138 63424.78 0.64404 0.00057958 -0.15639 -0.00014074 0.48765 0.00043884 899.914427231661 904.918315785227 97.152 1.4527 97.152 96.797 98.25 0 339 85 8 0 0 0 7.7852E-05 1 54507 53.754 53.754 1 0.66671 0.56791 0 35953000 21838000 14115000 10679 824 4061 4173 16693 16693 652 FDTGNLCMVTGGANLGR 17 0 1 Oxidation (M) _FDTGNLCM(ox)VTGGANLGR_ FDTGNLCM(1)VTGGANLGR FDTGNLCM(50.22)VTGGANLGR 0 1 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 904.9181 2 899.914178 1797.8138 64286.97 0.566 0.00050935 -0.36399 -0.00032756 0.20201 0.00018179 899.913896309267 904.9180502718 110.19 0.43042 110.19 109.95 110.38 -7.6294E-06 141 23 8 0 0 0 9.4386E-05 2 63580 50.222 50.222 1 0.94917 0.81452 0 8316100 4098700 4217400 10680 824 4061 4173 16694;16695 16695 652 FDTGNLCMVTGGANLGR 17 0 1 Oxidation (M) _FDTGNLCM(ox)VTGGANLGR_ FDTGNLCM(1)VTGGANLGR FDTGNLCM(71.98)VTGGANLGR 0 1 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 905.4209 2 899.914178 1797.8138 63581.52 0.072079 6.4864E-05 -0.068433 -6.1584E-05 0.0036453 3.2805E-06 899.914558928381 904.91836794121 97.211 0.85172 97.211 96.794 97.645 0 255 41 8 0 0 0 3.2886E-05 2 53707 71.976 71.976 1 0.62484 0.54503 0 37793000 23559000 14234000 10681 824 4061 4173 16696;16697 16696 652 FDTGNLCMVTGGANLGR 17 0 1 Oxidation (M) _FDTGNLCM(ox)VTGGANLGR_ FDTGNLCM(1)VTGGANLGR FDTGNLCM(50.22)VTGGANLGR 0 1 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 904.9186 2 899.914178 1797.8138 64240.18 0.43806 0.00039422 -0.37691 -0.00033918 0.061159 5.5038E-05 899.913935145876 904.918155096976 110.07 0.41356 110.07 109.88 110.29 -7.6294E-06 127 21 8 0 0 0 9.4386E-05 1 62603 50.222 50.222 1 0.96296 0.80074 0 7477600 3697100 3780500 10682 824 4061 4173 16698 16698 652 FDTGNLCMVTGGANLGR 17 0 1 Unmodified _FDTGNLCMVTGGANLGR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 892.4183 2 891.91672 1781.81889 62935.3 0.59375 0.00052957 0.27707 0.00024712 0.87081 0.00077669 891.917146165339 896.921943459989 110.12 0.81201 110.12 109.8 110.62 0 278 42 10 0 0 0 2.2723E-18 4 63579 134.61 134.61 1 1.1165 0.94735 0 32893000 15315000 17579000 10683 824 4061 4174 16699;16700;16701;16702 16702 FDTGNLCMVTGGANLGR 17 0 1 Unmodified _FDTGNLCMVTGGANLGR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 896.9227 2 891.91672 1781.81889 63270.13 0.41426 0.00036949 0.43608 0.00038895 0.85035 0.00075844 892.418285311481 896.922026309834 110.09 0.80064 110.09 109.74 110.54 0 298 42 12 0 0 0 3.9131E-05 4 62588 79.886 77.66 1 1.0954 0.95552 0 42590000 20214000 22376000 10684 824 4061 4174 16703;16704;16705;16706 16705 FDTIYQILLK 10 1 0 Unmodified _FDTIYQILLK_ 0 0 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3683 2 627.360639 1252.70673 NaN NaN NaN -0.12781 -8.0186E-05 NaN NaN NaN NaN 121.16 0.52106 121.16 120.96 121.48 -7.6294E-06 0 0 0 1.1323E-07 1 80100 109.21 96.989 1 NaN NaN 0 8498000 0 8498000 10685 1731;1802 4062 4175 16707 16707 FDTIYQILLK 10 1 0 Unmodified _FDTIYQILLK_ 0 0 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.361 2 627.360639 1252.70673 79155.63 1.048 0.00065747 -0.2342 -0.00014693 0.8138 0.00051055 627.861729091877 631.367662775899 134.13 0.23059 134.13 134 134.23 1.5259E-05 42 10 6 0 0 0 0.0081732 2 81801 56.434 55.451 1 1.2698 1.0729 0 1983700 935060 1048700 10686 1731;1802 4062 4175 16708;16709 16708 FDTIYQILLK 10 1 0 Unmodified _FDTIYQILLK_ 0 0 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.3679 2 627.360639 1252.70673 77903.57 1.185 0.00074342 0.3525 0.00022115 1.5375 0.00096456 627.360771056727 631.367866375867 133.89 0.33922 133.89 133.71 134.05 0 53 15 5 0 0 0 0.0080781 2 80743 56.563 56.563 1 1.3339 1.0876 0 1886500 878430 1008100 10687 1731;1802 4062 4175 16710;16711 16711 FDTPFLPK 8 1 0 Unmodified _FDTPFLPK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7679 2 482.760561 963.506569 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.307 1 93.307 92.807 93.807 0 0 0 0 0.0080733 1 56584 79.469 31.295 1 10688 1740 4063 4176 16712 16712 FDTPFLPK 8 1 0 Unmodified _FDTPFLPK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.2698 2 482.760561 963.506569 87332.09 0.32898 0.00015882 0.053819 2.5982E-05 0.3828 0.0001848 482.760587072532 486.767611095977 92.574 0.8488 92.574 92.247 93.096 0 292 70 6 0 0 0 0.017078 2 57226 60.682 60.682 1 1.0127 1.1315 0 89740000 47749000 41991000 10689 1740 4063 4176 16713;16714 16713 FDTPFLPK 8 1 0 Unmodified _FDTPFLPK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 482.7603 2 482.760561 963.506569 87777.98 0.28457 0.00013738 0.032044 1.547E-05 0.31661 0.00015285 482.760512873325 486.767671782602 106.23 0.80152 106.23 105.91 106.71 0 191 41 8 0 0 0 0.010197 2 60707 72.789 63.273 1 1.6335 1.2777 0 11772000 4095000 7676900 10690 1740 4063 4176 16715;16716 16716 FDTPFLPK 8 1 0 Unmodified _FDTPFLPK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.768 2 482.760561 963.506569 86627.91 0.38006 0.00018348 0.11661 5.6295E-05 0.49667 0.00023977 482.760425603703 486.767610520271 106.06 0.83942 106.06 105.73 106.57 0 174 50 6 0 0 0 0.015065 2 59589 61.999 61.999 1 1.7318 1.424 0 9951900 3430700 6521100 10691 1740 4063 4176 16717;16718 16717 FDTQLFHTIGVEFLNK 16 1 0 Unmodified _FDTQLFHTIGVEFLNK_ 0 0 0 A0A024RBV5;P51151 A0A024RBV5 A0A024RBV5 RAB9A Ras-related protein Rab-9A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.0002 3 636.999993 1907.97815 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.41 1 121.41 120.91 121.91 0 0 0 0 0.020224 1 78447 42.314 18.483 1 10692 348 4064 4177 16719 16719 FDTQLFHTIGVEFLNK 16 1 0 Unmodified _FDTQLFHTIGVEFLNK_ 0 0 0 A0A024RBV5;P51151 A0A024RBV5 A0A024RBV5 RAB9A Ras-related protein Rab-9A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.0063 3 636.999993 1907.97815 76901.34 0.86679 0.00055215 -0.064026 -4.0785E-05 0.80277 0.00051136 637.333382678932 640.005825827439 120.77 0.50587 120.77 120.56 121.07 7.6294E-06 170 33 7 0 0 0 6.9572E-05 2 79758 58.671 58.671 1 2.1263 2.2018 0 18683000 6016200 12667000 10693 348 4064 4177 16720;16721 16720 FDVGPK 6 1 0 Unmodified _FDVGPK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 331.6788 2 331.67904 661.343526 NaN NaN NaN 0.6455 0.0002141 NaN NaN NaN NaN 30.417 0.18348 30.417 30.315 30.499 -1.9073E-06 0 0 0 0.051452 1 14916 68.033 34.341 1 NaN NaN 0 6640500 6640500 0 10694 2002 4065 4178 16722 16722 FDVPGDENAEMDAR 14 0 1 Oxidation (M) _FDVPGDENAEM(ox)DAR_ FDVPGDENAEM(1)DAR FDVPGDENAEM(54.47)DAR 0 1 0 A4QPB0;A0A024RC65;P46940;H0YLE8;B4E2M0 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.3336 2 791.327927 1580.6413 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.002 1 55.002 54.502 55.502 0 0 0 0 0.0029922 1 30932 54.471 48.747 1 10695 352 4066 4179 16723 16723 259 FDVQWIFVK 9 1 0 Unmodified _FDVQWIFVK_ 0 0 0 B4DT65;B3KTL8;Q9BYJ9 B4DT65 B4DT65 YTHDF1 YTH domain-containing family protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.3162 2 591.321317 1180.62808 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.35 1 121.35 120.85 121.85 0 0 0 0 0.010186 1 80351 63.48 47.146 1 10696 944 4067 4180 16724 16724 FDYAFDDSAPNEMVYR 16 0 1 Oxidation (M) _FDYAFDDSAPNEM(ox)VYR_ FDYAFDDSAPNEM(1)VYR FDYAFDDSAPNEM(70.09)VYR 0 1 0 B0AZS5;O00139;B4DM85;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 983.418 2 978.409448 1954.80434 65463.2 0.42711 0.00041789 0.75342 0.00073715 1.1805 0.001155 978.410158581778 983.413805273427 88.988 0.30901 88.988 88.763 89.072 0 72 21 6 0 0 0 7.4776E-05 1 53670 70.089 69.099 1 0.84459 0.84963 0 17380000 11739000 5641500 10697 804 4068 4181 16725 16725 645 FDYAFDDSAPNEMVYR 16 0 1 Oxidation (M) _FDYAFDDSAPNEM(ox)VYR_ FDYAFDDSAPNEM(1)VYR FDYAFDDSAPNEM(53.25)VYR 0 1 0 B0AZS5;O00139;B4DM85;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 983.4145 2 978.409448 1954.80434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.179 1 88.179 87.679 88.679 0 0 0 0 0.0018374 1 54392 53.252 47.593 1 10698 804 4068 4181 16726 16726 645 FEAHPNDLYVEGLPENIPFR 20 0 1 Unmodified _FEAHPNDLYVEGLPENIPFR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.0604 3 786.390208 2356.1488 68243.87 0.89479 0.00070366 -0.065333 -5.1377E-05 0.82946 0.00065228 787.058660049134 790.06063117703 112.71 0.58007 112.71 112.46 113.04 -7.6294E-06 226 42 7 0 0 0 0.0013732 1 71113 27.61 27.61 1 0.92909 0.96444 0 22509000 11572000 10937000 10699 789 4069 4182 16727 16727 FEAHPNDLYVEGLPENIPFR 20 0 1 Unmodified _FEAHPNDLYVEGLPENIPFR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.3919 3 786.390208 2356.1488 70203.02 1.0378 0.00081608 -0.12481 -9.815E-05 0.91295 0.00071793 786.724489405136 790.060454440059 112.01 0.48594 112.01 111.77 112.26 7.6294E-06 226 36 9 0 0 0 5.2496E-07 1 72349 64.723 64.723 1 0.92336 0.9804 0 24036000 12204000 11832000 10700 789 4069 4182 16728 16728 FEAHPNDLYVEGLPENIPFR 20 0 1 Unmodified _FEAHPNDLYVEGLPENIPFR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.0624 3 786.390208 2356.1488 68116.13 0.88486 0.00069584 0.74299 0.00058428 1.6278 0.0012801 786.725160050031 790.061426270187 123.16 0.4606 123.16 122.95 123.41 0 116 20 9 0 0 0 1.8276E-06 3 73586 37.4 37.4 1 1.1117 0.94925 0 8832900 4313100 4519800 10701 789 4069 4182 16729;16730;16731 16730 FEAHPNDLYVEGLPENIPFR 20 0 1 Unmodified _FEAHPNDLYVEGLPENIPFR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 790.0627 3 786.390208 2356.1488 67856.01 0.93229 0.00073314 0.63739 0.00050123 1.5697 0.0012344 786.725005082577 790.061301189075 123.03 0.43713 123.03 122.86 123.3 0 106 20 9 0 0 0 2.3966E-06 2 72539 35.973 35.973 1 1.0279 0.83517 0 9965400 4591800 5373600 10702 789 4069 4182 16732;16733 16732 FEAPLFNAR 9 0 1 Unmodified _FEAPLFNAR_ 0 0 0 B4DJ81;E5KRK5;P28331 B4DJ81 B4DJ81 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.7803 2 532.779816 1063.54508 85716.64 0.51295 0.00027329 0.29324 0.00015623 0.80618 0.00042952 533.281937521755 537.783778688276 85.93 0.32299 85.93 85.79 86.113 -7.6294E-06 85 28 5 0 0 0 0.0067182 1 51724 63.48 63.48 1 1.4179 1.4424 0 7242800 2336900 4906000 10703 986 4070 4183 16734 16734 FEAPLFNAR 9 0 1 Unmodified _FEAPLFNAR_ 0 0 0 B4DJ81;E5KRK5;P28331 B4DJ81 B4DJ81 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.7844 2 532.779816 1063.54508 84542.2 0.74484 0.00039684 0.63593 0.00033881 1.3808 0.00073564 533.282822694283 537.783806482074 84.882 0.36327 84.882 84.689 85.052 0 87 30 4 0 0 0 0.0022292 1 52207 75.109 69.166 1 1.7761 1.7555 0 15132000 7044400 8087400 10704 986 4070 4183 16735 16735 FECICGELDQIDR 13 0 1 Unmodified _FECICGELDQIDR_ 0 0 0 A0A0D9SFM0;Q149N8;K4DI94 A0A0D9SFM0 A0A0D9SFM0 SHPRH E3 ubiquitin-protein ligase SHPRH MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.8682 2 827.863622 1653.71269 70796.71 0.59254 0.00049054 -0.31964 -0.00026462 0.27291 0.00022593 827.86352960255 832.867488906793 104.47 0.48997 104.47 104.27 104.76 0 93 27 5 0 0 0 0.013183 1 58616 38.58 37.383 1 1.609 1.3994 0 1549500 535320 1014200 10705 527 4071 4184 16736 16736 FEDCTSENTLIK 12 1 0 Unmodified _FEDCTSENTLIK_ 0 0 0 A8K6G9;Q92620;B4DM30;B4DET0 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.8364 2 728.834856 1455.65516 72404.48 0.5603 0.00040836 0.41474 0.00030228 0.97504 0.00071064 728.836165152447 733.842763881765 57.051 0.38632 57.051 56.853 57.239 0 96 27 8 0 0 0 0.023015 1 32923 37.556 29.828 1 0.7115 0.71177 0 15458000 9148800 6309700 10706 760 4072 4185 16737 16737 FEDEDSDDVPRK 12 1 1 Unmodified _FEDEDSDDVPRK_ 0 0 1 P49756 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.555 3 484.547682 1450.62122 85547.75 0.42245 0.00020469 0.0037914 1.8371E-06 0.42624 0.00020653 484.547695004675 490.554885821643 22.352 0.39925 22.352 22.161 22.56 0 99 22 6 0 0 0 0.013749 1 8443 25.178 25.178 1 1.1573 1.2544 0 15234000 5988100 9246400 10707 1587 4073 4186 16738 16738 FEDEDSDDVPRK 12 1 1 Unmodified _FEDEDSDDVPRK_ 0 0 1 P49756 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.319 2 726.317885 1450.62122 71773.45 1.0009 0.00072697 -0.028729 -2.0867E-05 0.97216 0.0007061 726.317600444087 735.328871536085 22.362 0.24807 22.362 22.248 22.496 -1.9073E-06 53 15 5 0 0 0 0.00038369 1 8453 84.658 84.658 1 1.3697 1.4914 0 9658000 3946700 5711300 10708 1587 4073 4186 16739 16739 FEDEDSDDVPRK 12 1 1 Unmodified _FEDEDSDDVPRK_ 0 0 1 P49756 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.3176 2 726.317885 1450.62122 71190.77 0.66305 0.00048159 -0.13221 -9.6028E-05 0.53084 0.00038556 726.317122216215 735.32891071644 22.112 0.29065 22.112 21.972 22.263 0 47 13 5 0 0 0 3.6637E-05 2 8198 102.52 102.52 1 1.2676 1.4204 0 12382000 4716900 7665000 10709 1587 4073 4186 16740;16741 16741 FEDEELQQILDDIQTK 16 1 0 Unmodified _FEDEELQQILDDIQTK_ 0 0 0 Q587J0;E9PB93;E9PHV4;A0A024RAJ4;O15514 Q587J0 Q587J0 POLR2D DNA-directed RNA polymerase II subunit RPB4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 986.4874 2 982.478385 1962.94222 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.83 0.99999 127.83 127.33 128.33 0 0 0 0 0.0055703 1 83315 51.286 38.278 1 10710 306 4074 4187 16742 16742 FEDENFILK 9 1 0 Unmodified _FEDENFILK_ 0 0 0 V9HWF5;A8K486;P62937;B2RE56;F8WE65;C9J5S7;Q71V99 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.7907 2 577.790047 1153.56554 80490.33 0.71613 0.00041377 0.36111 0.00020864 1.0772 0.00062242 577.790382898772 581.79730061454 85.572 0.88137 85.572 85.039 85.92 0 327 69 6 0 0 0 0.00018573 2 52651 107.01 27.295 1 3.8152 4.2641 0 98401000 19001000 79400000 10711 731 4075 4188 16743;16744 16744 FEDENFILK 9 1 0 Unmodified _FEDENFILK_ 0 0 0 V9HWF5;A8K486;P62937;B2RE56;F8WE65;C9J5S7;Q71V99 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.7975 2 577.790047 1153.56554 80673.06 0.53253 0.00030769 0.45122 0.00026071 0.98375 0.0005684 577.790292380235 581.797229863845 98.738 0.9305 98.738 98.289 99.219 7.6294E-06 233 55 6 0 0 0 0.033207 2 54882 44.753 13.331 1 1.4197 1.1474 0 4336400 1876000 2460400 10712 731 4075 4188 16745;16746 16745 FEDQPEGIDLEVVTESTGK 19 1 0 Unmodified _FEDQPEGIDLEVVTESTGK_ 0 0 0 B4E0Q4;B4DZJ7;O00267;B4DJK4 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1051.007 2 1046.99968 2091.98481 NaN NaN NaN -0.79251 -0.00082976 NaN NaN NaN NaN 106.52 0.11734 106.52 106.44 106.56 7.6294E-06 0 0 0 0.0017361 1 66179 50.562 38.002 1 NaN NaN 0 3675600 0 3675600 10713 1056 4076 4189 16747 16747 FEDQPEGIDLEVVTESTGK 19 1 0 Unmodified _FEDQPEGIDLEVVTESTGK_ 0 0 0 B4E0Q4;B4DZJ7;O00267;B4DJK4 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1051.0077 2 1046.99968 2091.98481 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106 1 106 105.5 106.5 0 0 0 0 0.0022768 1 67416 53.754 47.521 1 10714 1056 4076 4189 16748 16748 FEDSPSYVK 9 1 0 Unmodified _FEDSPSYVK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.2607 2 536.253297 1070.49204 NaN NaN NaN -0.25267 -0.00013549 NaN NaN NaN NaN 38.4 0.79029 38.4 38.163 38.953 0 0 0 0 8.1393E-05 1 19624 101.64 76.721 1 NaN NaN 0 112480000 0 112480000 10715 1391 4077 4190 16749 16749 FEDSPSYVK 9 1 0 Unmodified _FEDSPSYVK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.2537 2 536.253297 1070.49204 81571.63 0.56486 0.00030291 -0.064681 -3.4686E-05 0.50018 0.00026822 536.253358612909 540.260320539086 44.027 1.3882 44.027 43.738 45.126 -3.8147E-06 334 100 7 0 0 0 0.020683 2 20909 50.04 40.524 1 5.267 4.2921 0 31820000 5293000 26527000 10716 1391 4077 4190 16750;16751 16751 FEDSPSYVK 9 1 0 Unmodified _FEDSPSYVK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.2535 2 536.253297 1070.49204 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.271 1 44.271 43.771 44.771 0 0 0 0 0.012839 1 20464 60.91 26.086 1 10717 1391 4077 4190 16752 16752 FEEAPDYMYLR 11 0 1 Oxidation (M) _FEEAPDYM(ox)YLR_ FEEAPDYM(1)YLR FEEAPDYM(61.65)YLR 0 1 0 V9HW00;P48729;B4E1D9;D6REM4;H0Y9X2;U3KQK7;B4DFH4;E7ETM0;B4DER9;U3KPX3;U3KQ83 V9HW00 V9HW00 HEL-S-77p;CSNK1A1 Casein kinase I isoform alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.3226 2 725.321385 1448.62822 71878.78 0.73519 0.00053325 0.0062196 4.5112E-06 0.74141 0.00053776 725.822560068441 730.32497132216 76.215 0.51747 76.215 76.012 76.529 -7.6294E-06 132 41 6 0 0 0 0.0011744 1 44857 61.65 61.65 1 1.6205 1.7013 0 11138000 4734500 6403700 10718 1577 4078 4191 16753 16753 1355 FEEAPDYMYLR 11 0 1 Oxidation (M) _FEEAPDYM(ox)YLR_ FEEAPDYM(1)YLR FEEAPDYM(65.31)YLR 0 1 0 V9HW00;P48729;B4E1D9;D6REM4;H0Y9X2;U3KQK7;B4DFH4;E7ETM0;B4DER9;U3KPX3;U3KQ83 V9HW00 V9HW00 HEL-S-77p;CSNK1A1 Casein kinase I isoform alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.8295 2 725.321385 1448.62822 72500.02 0.54399 0.00039457 0.10263 7.4439E-05 0.64662 0.00046901 725.321570537182 730.325171043877 75.268 0.50996 75.268 75.004 75.514 -7.6294E-06 173 44 5 0 0 0 0.00083581 1 45266 65.305 61.222 1 1.3436 1.3388 0 11695000 4958900 6736300 10719 1577 4078 4191 16754 16754 1355 FEEEELQR 8 0 1 Unmodified _FEEEELQR_ 0 0 0 Q8TDD1;H0YHH7 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.254 2 540.253828 1078.4931 83573.55 0.84087 0.00045428 1.5217 0.00082209 2.3626 0.0012764 540.254548735642 545.259299099606 35.533 0.5982 35.533 35.241 35.839 0 175 55 7 0 0 0 0.0010963 2 17845 112.17 94.186 1 0.77605 0.86221 0 72518000 37164000 35354000 10720 1933 4079 4192 16755;16756 16756 FEEEELQR 8 0 1 Unmodified _FEEEELQR_ 0 0 0 Q8TDD1;H0YHH7 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.2555 2 540.253828 1078.4931 NaN NaN NaN 1.4164 0.0007652 NaN NaN NaN NaN 34.677 0.63965 34.677 34.409 35.049 0 0 0 0 0.0033532 1 17558 98.299 71.697 1 NaN NaN 0 15431000 15431000 0 10721 1933 4079 4192 16757 16757 FEEEELQR 8 0 1 Unmodified _FEEEELQR_ 0 0 0 Q8TDD1;H0YHH7 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.254 2 540.253828 1078.4931 83097.86 0.45587 0.00024629 0.096362 5.206E-05 0.55224 0.00029835 540.25388940339 545.257893118939 40.818 0.73215 40.818 40.584 41.316 0 265 59 6 0 0 0 0.0078439 1 18825 81.191 67.033 1 1.3957 1.1496 0 11725000 5037300 6687300 10722 1933 4079 4192 16758 16758 FEEESKEPVADEEEEDSDDDVEPITEFR 28 1 1 Unmodified _FEEESKEPVADEEEEDSDDDVEPITEFR_ 0 0 1 E9PJF4;P54105 E9PJF4 E9PJF4 CLNS1A Methylosome subunit pICln ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1111.8097 3 1105.46707 3313.37938 NaN NaN NaN -0.65228 -0.00072107 NaN NaN NaN NaN 86.546 0.17236 86.546 86.411 86.583 0 0 0 0 5.3808E-06 2 53289 45.511 43.581 1 NaN NaN 0 10078000 0 10078000 10723 1241 4080 4193 16759;16760 16759 FEEEVPR 7 0 1 Unmodified _FEEEVPR_ 0 0 0 A8K031;O14777;Q05DQ6;V9GYM9 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.2216 2 453.2218 904.429047 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.551 1 36.551 36.051 37.051 0 0 0 0 0.047831 1 18491 66.993 19.948 1 10724 696 4081 4194 16761 16761 FEEEVPR 7 0 1 Unmodified _FEEEVPR_ 0 0 0 A8K031;O14777;Q05DQ6;V9GYM9 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.2222 2 453.2218 904.429047 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.605 1 35.605 35.105 36.105 3.8147E-06 0 0 0 0.014972 1 18165 86.866 36.747 1 10725 696 4081 4194 16762 16762 FEELCSDLFR 10 0 1 Unmodified _FEELCSDLFR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.3032 2 658.302995 1314.59144 76654.13 0.95545 0.00062898 0.2602 0.00017129 1.2157 0.00080027 658.303066657406 663.307559526021 98.481 0.73046 98.481 98.072 98.803 0 269 59 6 0 0 0 0.00084902 1 59970 80.239 80.239 1 0.72048 0.73173 0 29175000 18284000 10890000 10726 533;845 4082 4195 16763 16763 FEELCSDLFR 10 0 1 Unmodified _FEELCSDLFR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.3035 2 658.302995 1314.59144 76820.13 0.51224 0.00033721 0.37666 0.00024796 0.88891 0.00058517 658.303214097761 663.307555882363 97.536 0.71254 97.536 97.315 98.028 -7.6294E-06 239 56 6 0 0 0 0.0043374 1 60836 61.65 61.65 1 0.71563 0.71965 0 19280000 11107000 8172600 10727 533;845 4082 4195 16764 16764 FEELCSDLFR 10 0 1 Unmodified _FEELCSDLFR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.8032 2 658.302995 1314.59144 76863.18 0.70765 0.00046585 0.042751 2.8143E-05 0.7504 0.00049399 658.302969693975 663.307393130321 110.97 0.63541 110.97 110.71 111.34 0 108 31 6 0 0 0 0.019834 2 63233 46.891 46.891 1 0.97225 0.87627 0 2053600 988320 1065300 10728 533;845 4082 4195 16765;16766 16766 FEELNADLFR 10 0 1 Unmodified _FEELNADLFR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652;B3KUS2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.3175 2 627.311677 1252.6088 74910.62 0.7314 0.00045882 0.26769 0.00016793 0.9991 0.00062675 627.311659690268 632.315925665633 100.71 1.3687 100.71 100.13 101.5 7.6294E-06 538 107 8 0 0 0 3.9201E-12 3 62070 145.92 116.11 1 1.3158 1.504 0 125960000 56343000 69616000 10729 1467;1248 4083 4196 16767;16768;16769 16769 FEELNADLFR 10 0 1 Unmodified _FEELNADLFR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652;B3KUS2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3116 2 627.311677 1252.6088 76056.66 0.72135 0.00045251 -0.048084 -3.0164E-05 0.67326 0.00042234 627.311583852467 632.315742581603 99.927 1.3104 99.927 99.466 100.78 0 556 104 8 0 0 0 5.3483E-13 3 62673 149.94 117.1 1 1.3713 1.5627 0 102360000 42577000 59783000 10730 1467;1248 4083 4196 16770;16771;16772 16771 FEELNADLFR 10 0 1 Unmodified _FEELNADLFR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652;B3KUS2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3121 2 627.311677 1252.6088 NaN NaN NaN 0.36095 0.00022643 NaN NaN NaN NaN 100.6 0.13869 100.6 100.57 100.7 0 0 0 0 0.0080506 1 63259 65.347 54.196 1 NaN NaN 0 3066800 3066800 0 10731 1467;1248 4083 4196 16773 16773 FEELNADLFR 10 0 1 Unmodified _FEELNADLFR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652;B3KUS2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.3122 2 627.311677 1252.6088 76745.17 0.90065 0.00056499 -0.038906 -2.4406E-05 0.86174 0.00054058 627.311582048921 632.315870982067 113.03 1.1361 113.03 112.71 113.84 -7.6294E-06 206 54 8 0 0 0 9.6112E-06 1 65709 105.52 93.673 1 1.3159 1.0784 0 12780000 5270900 7509200 10732 1467;1248 4083 4196 16774 16774 FEELNADLFR 10 0 1 Unmodified _FEELNADLFR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652;B3KUS2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.3156 2 627.311677 1252.6088 76971.8 0.68315 0.00042855 0.032501 2.0388E-05 0.71565 0.00044893 627.311691561226 632.315775756867 112.91 1.033 112.91 112.58 113.61 0 188 49 8 0 0 0 0.00022723 2 64649 93.178 80.141 1 1.3821 1.1249 0 12482000 5824800 6656800 10733 1467;1248 4083 4196 16775;16776 16775 FEEPDSASVK 10 1 0 Unmodified _FEEPDSASVK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;B7ZLF4 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.7676 2 554.761486 1107.50842 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.022 1 34.022 33.522 34.522 0 0 0 0 0.0044532 1 16971 64.841 19.759 1 10734 1916 4084 4197 16777 16777 FEEPDSASVK 10 1 0 Unmodified _FEEPDSASVK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;B7ZLF4 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.768 2 554.761486 1107.50842 76873.17 0.28455 0.00015786 0.60386 0.000335 0.88841 0.00049286 554.761093408809 558.768481003847 33.437 0.46346 33.437 33.197 33.66 0 150 38 6 0 0 0 0.0016591 2 16677 72.643 46.749 1 0.76033 0.77468 0 30820000 16201000 14619000 10735 1916 4084 4197 16778;16779 16779 FEEPDSASVK 10 1 0 Unmodified _FEEPDSASVK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;B7ZLF4 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.7602 2 554.761486 1107.50842 80976.4 0.22696 0.00012591 0.35826 0.00019875 0.58522 0.00032466 554.76140491341 558.768663366063 39.177 0.47216 39.177 38.949 39.421 0 183 41 6 0 0 0 0.016025 1 17810 48.423 22.687 1 1.4932 1.1809 0 5097900 2226800 2871100 10736 1916 4084 4197 16780 16780 FEEPDSASVK 10 1 0 Unmodified _FEEPDSASVK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;B7ZLF4 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.7695 2 554.761486 1107.50842 81031.38 0.33388 0.00018522 0.048967 2.7165E-05 0.38284 0.00021239 554.761131907104 558.768438476439 39.351 0.44212 39.351 39.161 39.603 0 167 32 7 0 0 0 0.04172 1 17393 38.086 11.484 1 1.5349 1.2596 0 5167900 1604600 3563300 10737 1916 4084 4197 16781 16781 FEEQGDFESEK 11 1 0 Unmodified _FEEQGDFESEK_ 0 0 0 F8VUA7;F8VQX7;Q641R2;A0A024RBB8;Q5HYM3;Q9BZF1;Q96E43 F8VUA7 F8VUA7 OSBPL8;DKFZp686C0249 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.7894 2 672.783147 1343.55174 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.735 1 36.735 36.235 37.235 0 0 0 0 2.6072E-05 1 18611 89.08 73.819 1 10738 333 4085 4198 16782 16782 FEEYGPVIECDIVK 14 1 0 Unmodified _FEEYGPVIECDIVK_ 0 0 0 A8K9U0;Q9BWF3;E9PB51;Q9BQ04;E9PLB0;E9PM61;D6R9K7;U3KQD5;J3QRR5 A8K9U0 A8K9U0 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.4059 2 849.408188 1696.80182 67349.35 0.58893 0.00050024 0.36497 0.00031001 0.9539 0.00081025 849.910224752494 853.416145712949 99.716 0.44751 99.716 99.499 99.946 0 95 37 4 0 0 0 0.003354 1 61037 47.288 47.288 1 1.1892 1.2002 0 7027700 3114700 3913000 10739 788 4086 4199 16783 16783 FEEYGPVIECDIVK 14 1 0 Unmodified _FEEYGPVIECDIVK_ 0 0 0 A8K9U0;Q9BWF3;E9PB51;Q9BQ04;E9PLB0;E9PM61;D6R9K7;U3KQD5;J3QRR5 A8K9U0 A8K9U0 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 853.4161 2 849.408188 1696.80182 NaN NaN NaN -1.7563 -0.0014918 NaN NaN NaN NaN 112.3 0.52896 112.3 112.05 112.58 0 0 0 0 0.051914 1 65256 38.402 26.189 1 NaN NaN 0 1468800 0 1468800 10740 788 4086 4199 16784 16784 FEEYGPVIECDIVK 14 1 0 Unmodified _FEEYGPVIECDIVK_ 0 0 0 A8K9U0;Q9BWF3;E9PB51;Q9BQ04;E9PLB0;E9PM61;D6R9K7;U3KQD5;J3QRR5 A8K9U0 A8K9U0 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 853.9151 2 849.408188 1696.80182 65364.21 0.69841 0.00059324 -1.0651 -0.00090472 -0.3667 -0.00031148 849.406560373793 853.413782411422 112.19 0.55594 112.19 111.87 112.43 0 82 29 5 0 0 0 0.0081729 2 64203 39.148 38.783 1 1.1406 0.92004 0 2994600 1370600 1624000 10741 788 4086 4199 16785;16786 16785 FEGAIYR 7 0 1 Unmodified _FEGAIYR_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 428.2213 2 428.221603 854.428653 92149.08 0.072762 3.1158E-05 0.15886 6.8025E-05 0.23162 9.9183E-05 428.221348334908 433.225593784859 40.914 0.55351 40.914 40.687 41.24 0 173 46 6 0 0 0 0.027056 1 21512 86.512 22.114 1 2.2591 2.3503 0 38152000 11511000 26641000 10742 1507 4087 4200 16787 16787 FEGAVIR 7 0 1 Unmodified _FEGAVIR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 396.2241 2 396.224146 790.433738 96243.84 0.41125 0.00016295 0.24952 9.8866E-05 0.66077 0.00026181 396.224090989282 401.22828510608 41.255 0.55172 41.255 40.982 41.534 3.8147E-06 188 45 6 0 0 0 0.024839 2 21618 89.673 20.241 1 0.97979 1.0895 0 75391000 37696000 37695000 10743 1742 4088 4201 16788;16789 16788 FEGAVIR 7 0 1 Unmodified _FEGAVIR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 396.2243 2 396.224146 790.433738 96723.64 0.32222 0.00012767 -0.019348 -7.6661E-06 0.30287 0.00012001 396.224019477887 401.228167361375 40.15 0.52413 40.15 39.935 40.46 0 193 44 7 0 0 0 0.026865 2 21344 74.439 16.102 1 0.84379 0.96266 0 142030000 72949000 69082000 10744 1742 4088 4201 16790;16791 16791 FEIVYNLLSLR 11 0 1 Unmodified _FEIVYNLLSLR_ 0 0 0 Q9UF24;O75489;Q53FM7 Q9UF24 Q9UF24 DKFZp586K0821;NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.894 2 683.890095 1365.76564 77648.48 0.79913 0.00054652 0.30665 0.00020972 1.1058 0.00075623 683.890322609769 688.894299711593 127.84 0.35072 127.84 127.63 127.99 0 50 21 4 0 0 0 0.0018568 3 83254 64.297 64.297 1 1.4471 1.5679 0 2030300 1093300 937070 10745 1406 4089 4202 16792;16793;16794 16792 FEIVYNLLSLR 11 0 1 Unmodified _FEIVYNLLSLR_ 0 0 0 Q9UF24;O75489;Q53FM7 Q9UF24 Q9UF24 DKFZp586K0821;NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8951 2 683.890095 1365.76564 76706.23 0.78178 0.00053465 0.51141 0.00034975 1.2932 0.0008844 683.890697440473 688.894493375723 127.4 0.4197 127.4 127.18 127.6 7.6294E-06 69 25 5 0 0 0 0.001099 3 85003 70.1 70.1 1 1.9363 2.0813 0 3227900 1364400 1863600 10746 1406 4089 4202 16795;16796;16797 16795 FELDEDVK 8 1 0 Unmodified _FELDEDVK_ 0 0 0 A0A140VJZ1;P45974;F5H571 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.7469 2 497.740022 993.465492 NaN NaN NaN -0.79061 -0.00039352 NaN NaN NaN NaN 59.896 0.47509 59.896 59.587 60.062 0 0 0 0 0.0065427 1 34031 85.064 48.043 1 NaN NaN 0 14164000 0 14164000 10747 613 4090 4203 16798 16798 FELDEDVK 8 1 0 Unmodified _FELDEDVK_ 0 0 0 A0A140VJZ1;P45974;F5H571 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.7469 2 497.740022 993.465492 NaN NaN NaN -0.57352 -0.00028546 NaN NaN NaN NaN 58.764 0.34321 58.764 58.559 58.902 -3.8147E-06 0 0 0 0.013158 2 34099 72.485 45.883 1 NaN NaN 0 15102000 0 15102000 10748 613 4090 4203 16799;16800 16800 FELLTNFPR 9 0 1 Unmodified _FELLTNFPR_ 0 0 0 O94888;C9JAT7;B4E126 O94888 O94888 UBXN7 UBX domain-containing protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.8087 2 568.808574 1135.60259 83721.23 0.66306 0.00037715 -0.22448 -0.00012769 0.43857 0.00024946 568.808534883923 573.812739809427 118.39 0.46782 118.39 118.18 118.65 0 58 22 4 0 0 0 0.041466 1 69003 41.448 37.702 1 0.70537 0.6051 0 1070300 649400 420920 10749 1417 4091 4204 16801 16801 FELQHGTEEQQEEVR 15 0 1 Unmodified _FELQHGTEEQQEEVR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.2907 3 620.290383 1857.84932 78477.73 0.92269 0.00057234 -0.22349 -0.00013863 0.6992 0.00043371 620.624727712459 623.62578543186 38.001 0.6167 38.001 37.814 38.431 -3.8147E-06 129 51 6 0 0 0 0.00035487 1 19414 38.661 37.697 1 0.56951 0.59827 0 11198000 7527400 3671000 10750 1418 4092 4205 16802 16802 FELQHGTEEQQEEVR 15 0 1 Unmodified _FELQHGTEEQQEEVR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.6238 3 620.290383 1857.84932 NaN NaN NaN -0.28617 -0.00017751 NaN NaN NaN NaN 36.874 0.56728 36.874 36.671 37.238 3.8147E-06 0 0 0 1.8206E-05 1 19046 71.08 65.5 1 NaN NaN 0 10950000 10950000 0 10751 1418 4092 4205 16803 16803 FELSCYSLAPQIK 13 1 0 Unmodified _FELSCYSLAPQIK_ 0 0 0 Q5T6L4;P00966;A8KAP9;A0A0S2Z3D8;Q5T6L6;A0A0S2Z3B6 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.9044 2 778.394884 1554.77522 69729.8 0.71966 0.00056018 -0.58143 -0.00045258 0.13823 0.0001076 778.394976025896 782.401218268847 106.22 0.52997 106.22 105.96 106.49 0 136 36 6 0 0 0 5.4124E-06 2 65853 105.86 99.57 1 2.4875 2.566 0 14616000 4127700 10488000 10752 1437 4093 4206 16804;16805 16804 FELSCYSLAPQIK 13 1 0 Unmodified _FELSCYSLAPQIK_ 0 0 0 Q5T6L4;P00966;A8KAP9;A0A0S2Z3D8;Q5T6L6;A0A0S2Z3B6 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.4031 2 778.394884 1554.77522 69907.2 0.65024 0.00050615 -0.53182 -0.00041396 0.11843 9.2185E-05 778.395095969066 782.401843411338 105.59 0.52269 105.59 105.33 105.86 7.6294E-06 137 35 6 0 0 0 0.00014894 3 66953 84.17 76.283 1 1.7726 1.7868 0 16197000 4907400 11289000 10753 1437 4093 4206 16806;16807;16808 16806 FELSCYSLAPQIK 13 1 0 Unmodified _FELSCYSLAPQIK_ 0 0 0 Q5T6L4;P00966;A8KAP9;A0A0S2Z3D8;Q5T6L6;A0A0S2Z3B6 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 782.4018 2 778.394884 1554.77522 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.6 1 117.6 117.1 118.1 7.6294E-06 0 0 0 0.0027043 1 69317 66.595 52.176 1 10754 1437 4093 4206 16809 16809 FELSCYSLAPQIK 13 1 0 Unmodified _FELSCYSLAPQIK_ 0 0 0 Q5T6L4;P00966;A8KAP9;A0A0S2Z3D8;Q5T6L6;A0A0S2Z3B6 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 782.4034 2 778.394884 1554.77522 NaN NaN NaN -0.65596 -0.0005106 NaN NaN NaN NaN 117.41 0.33166 117.41 117.26 117.6 -7.6294E-06 0 0 0 0.00057687 1 68247 81.865 68.909 1 NaN NaN 0 2301200 0 2301200 10755 1437 4093 4206 16810 16810 FELTGIPPAPR 11 0 1 Unmodified _FELTGIPPAPR_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96H53;E9PS65;Q96BE0;E9PM13 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.3399 2 599.334956 1196.65536 78957.08 0.92843 0.00055644 0.14605 8.7532E-05 1.0745 0.00064397 599.334930003735 604.33903898642 93.286 1.9224 93.286 92.202 94.125 0 724 173 7 0 0 0 0.02976 1 56284 39.022 30.173 1 0.80116 0.9089 0 108420000 59884000 48541000 10756 1467 4094 4207 16811 16811 FELTGIPPAPR 11 0 1 Unmodified _FELTGIPPAPR_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96H53;E9PS65;Q96BE0;E9PM13 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.3395 2 599.334956 1196.65536 79423.05 0.83609 0.0005011 0.90328 0.00054137 1.7394 0.0010425 599.335371713005 604.339585230616 92.507 1.878 92.507 91.314 93.192 0 645 161 6 0 0 0 0.032791 1 56950 37.476 30.416 1 0.75933 0.86459 0 129980000 76548000 53431000 10757 1467 4094 4207 16812 16812 FEMEQNLR 8 0 1 Oxidation (M) _FEM(ox)EQNLR_ FEM(1)EQNLR FEM(128.57)EQNLR 0 1 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.7515 2 541.750398 1081.48624 NaN NaN NaN 0.064384 3.488E-05 NaN NaN NaN NaN 26.273 0.42164 26.273 26.031 26.452 0 0 0 0 4.4233E-06 1 11735 128.57 100.46 1 NaN NaN 0 94496000 94496000 0 + 10758 1165 4095 4208 16813 16813 878 FEMEQNLR 8 0 1 Oxidation (M) _FEM(ox)EQNLR_ FEM(1)EQNLR FEM(87.32)EQNLR 0 1 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.7504 2 541.750398 1081.48624 NaN NaN NaN -0.15048 -8.1521E-05 NaN NaN NaN NaN 25.957 0.35984 25.957 25.745 26.105 0 0 0 0 0.0017826 1 11437 87.323 59.798 1 NaN NaN 0 168100000 168100000 0 + 10759 1165 4095 4208 16814 16814 878 FEMEQNLR 8 0 1 Oxidation (M) _FEM(ox)EQNLR_ FEM(1)EQNLR FEM(41.43)EQNLR 0 1 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.7504 2 541.750398 1081.48624 NaN NaN NaN -0.12464 -6.7523E-05 NaN NaN NaN NaN 29.641 0.60121 29.641 29.316 29.918 0 0 0 0 0.024244 1 12035 41.429 28.47 1 NaN NaN 0 3863100 3863100 0 + 10760 1165 4095 4208 16815 16815 878 FEMEQNLR 8 0 1 Unmodified _FEMEQNLR_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.7526 2 533.752941 1065.49133 NaN NaN NaN 0.25023 0.00013356 NaN NaN NaN NaN 50.838 0.53468 50.838 50.627 51.162 0 0 0 0 0.021343 1 28028 64.567 43.942 1 NaN NaN 0 20138000 20138000 0 + 10761 1165 4095 4209 16816 16816 FEMEQNLR 8 0 1 Unmodified _FEMEQNLR_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.7535 2 533.752941 1065.49133 NaN NaN NaN -0.31537 -0.00016833 NaN NaN NaN NaN 49.653 0.72352 49.653 49.339 50.063 0 0 0 0 0.030786 1 28046 58.782 41.386 1 NaN NaN 0 9810400 9810400 0 + 10762 1165 4095 4209 16817 16817 FENLGIQPPK 10 1 0 Unmodified _FENLGIQPPK_ 0 0 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5;E9PMD8;E9PN50 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.8206 2 571.813856 1141.61316 NaN NaN NaN -0.88279 -0.00050479 NaN NaN NaN NaN 72.71 0.6538 72.71 72.417 73.071 0 0 0 0 0.0059721 2 43754 67.494 51.832 1 NaN NaN 0 8594700 0 8594700 10763 617 4096 4210 16818;16819 16818 FEPEYSQIK 9 1 0 Unmodified _FEPEYSQIK_ 0 0 0 E5RH50;A0A0B4J210;Q6PKG0;H0YC33 E5RH50 E5RH50 LARP1 La-related protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.7889 2 570.782222 1139.54989 NaN NaN NaN -0.42628 -0.00024332 NaN NaN NaN NaN 50.508 0.52204 50.508 50.26 50.782 -3.8147E-06 0 0 0 0.042582 1 28544 49.418 29.904 1 NaN NaN 0 13136000 0 13136000 10764 500 4097 4211 16820 16820 FEPPQSDSDGQR 12 0 1 Unmodified _FEPPQSDSDGQR_ 0 0 0 O15042;E7ET15;B4DK81;E7EW00;H0Y8D9 O15042 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.8034 2 681.799662 1361.58477 NaN NaN NaN -0.21095 -0.00014383 NaN NaN NaN NaN 25.096 0.34921 25.096 24.946 25.296 0 0 0 0 0.048295 1 10794 42.001 26.85 1 NaN NaN 0 3443200 0 3443200 10765 1374 4098 4212 16821 16821 FEPQVDTEAEDMISAVK 17 1 0 Oxidation (M) _FEPQVDTEAEDM(ox)ISAVK_ FEPQVDTEAEDM(1)ISAVK FEPQVDTEAEDM(94.72)ISAVK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.9559 2 962.945863 1923.87717 NaN NaN NaN -0.96484 -0.00092909 NaN NaN NaN NaN 82.625 0.5069 82.625 82.412 82.919 0 0 0 0 1.9938E-09 1 49380 94.717 79.177 1 NaN NaN 0 33041000 0 33041000 10766 2103 4099 4213 16822 16822 1925 FEPQVDTEAEDMISAVK 17 1 0 Oxidation (M) _FEPQVDTEAEDM(ox)ISAVK_ FEPQVDTEAEDM(1)ISAVK FEPQVDTEAEDM(82.07)ISAVK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.953 2 962.945863 1923.87717 NaN NaN NaN -0.68447 -0.00065911 NaN NaN NaN NaN 81.873 0.59574 81.873 81.545 82.141 0 0 0 0 3.8286E-07 1 49949 82.069 68.406 1 NaN NaN 0 49288000 0 49288000 10767 2103 4099 4213 16823 16823 1925 FEPQVDTEAEDMISAVK 17 1 0 Oxidation (M) _FEPQVDTEAEDM(ox)ISAVK_ FEPQVDTEAEDM(1)ISAVK FEPQVDTEAEDM(129.54)ISAVK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 967.4545 2 962.945863 1923.87717 NaN NaN NaN -0.48479 -0.00046683 NaN NaN NaN NaN 82.346 0.63213 82.346 82.079 82.711 0 0 0 0 4.6575E-20 1 50477 129.54 114 1 NaN NaN 0 35642000 0 35642000 10768 2103 4099 4213 16824 16824 1925 FEPQVDTEAEDMISAVK 17 1 0 Oxidation (M) _FEPQVDTEAEDM(ox)ISAVK_ FEPQVDTEAEDM(1)ISAVK FEPQVDTEAEDM(51.64)ISAVK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.9539 2 962.945863 1923.87717 NaN NaN NaN -0.21854 -0.00021044 NaN NaN NaN NaN 95.518 0.71718 95.518 95.22 95.937 7.6294E-06 0 0 0 0.0013266 1 53575 51.643 43.732 1 NaN NaN 0 4452900 0 4452900 10769 2103 4099 4213 16825 16825 1925 FEPQVDTEAEDMISAVK 17 1 0 Oxidation (M) _FEPQVDTEAEDM(ox)ISAVK_ FEPQVDTEAEDM(1)ISAVK FEPQVDTEAEDM(54.09)ISAVK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.9539 2 962.945863 1923.87717 NaN NaN NaN -0.57083 -0.00054968 NaN NaN NaN NaN 94.946 0.59738 94.946 94.634 95.231 0 0 0 0 0.00081405 1 52292 54.09 45.361 1 NaN NaN 0 4182700 0 4182700 10770 2103 4099 4213 16826 16826 1925 FEPQVDTEAEDMISAVK 17 1 0 Oxidation (M) _FEPQVDTEAEDM(ox)ISAVK_ FEPQVDTEAEDM(1)ISAVK FEPQVDTEAEDM(57.27)ISAVK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 967.4558 2 962.945863 1923.87717 NaN NaN NaN 0.11289 0.00010871 NaN NaN NaN NaN 95.474 0.72765 95.474 95.204 95.931 0 0 0 0 0.00049596 1 52777 57.267 49.163 1 NaN NaN 0 4165900 0 4165900 10771 2103 4099 4213 16827 16827 1925 FEPQVDTEAEDMISAVK 17 1 0 Unmodified _FEPQVDTEAEDMISAVK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 959.4573 2 954.948406 1907.88226 NaN NaN NaN -0.21884 -0.00020898 NaN NaN NaN NaN 119.46 0.75283 119.46 119.23 119.98 7.6294E-06 0 0 0 0.0053057 1 69900 50.088 36.66 1 NaN NaN 0 9995700 0 9995700 10772 2103 4099 4214 16828 16828 FEPYANPTK 9 1 0 Unmodified _FEPYANPTK_ 0 0 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.764 2 533.763832 1065.51311 83071.09 0.87031 0.00046454 0.18384 9.8129E-05 1.0541 0.00056267 533.763614487733 537.770891848336 38.141 1.2256 38.141 37.425 38.65 0 366 102 8 0 0 0 0.020403 2 19446 56.729 56.729 1 1.3652 1.5425 0 141380000 59195000 82187000 10773 1599 4100 4215 16829;16830 16830 FEPYANPTK 9 1 0 Unmodified _FEPYANPTK_ 0 0 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.7716 2 533.763832 1065.51311 82841.02 0.64321 0.00034332 0.10382 5.5415E-05 0.74703 0.00039874 533.76377804815 537.770850374843 37.153 0.91333 37.153 36.745 37.658 0 313 73 8 0 0 0 0.0016784 2 19145 82.279 74.184 1 1.3907 1.5939 0 165190000 68153000 97032000 10774 1599 4100 4215 16831;16832 16831 FEPYANPTK 9 1 0 Unmodified _FEPYANPTK_ 0 0 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.7636 2 533.763832 1065.51311 83400.88 0.45976 0.00024541 -0.086327 -4.6078E-05 0.37344 0.00019933 533.763692502463 537.770668878911 43.342 0.81693 43.342 42.937 43.754 0 229 52 7 0 0 0 0.036819 1 20354 50.04 50.04 1 1.0802 0.85988 0 9877800 4966100 4911700 10775 1599 4100 4215 16833 16833 FEQLEWR 7 0 1 Unmodified _FEQLEWR_ 0 0 0 Q9NSI6;Q5R2U6;H0Y463;Q5R2U9;H0Y500;Q5R2U8;H0Y5I9;Q5R2U5;H0Y4A7;Q5R2U4;H0Y4R9 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.2514 2 504.250892 1006.48723 87727.69 0.36446 0.00018378 0.2187 0.00011028 0.58317 0.00029406 504.250829618127 509.25528757401 69.886 0.42287 69.886 69.638 70.061 0 90 34 4 0 0 0 0.026652 2 41591 79.469 37.816 1 0.77462 0.78246 0 10035000 6767400 3267400 10776 2068 4101 4216 16834;16835 16834 FEQLEWR 7 0 1 Unmodified _FEQLEWR_ 0 0 0 Q9NSI6;Q5R2U6;H0Y463;Q5R2U9;H0Y500;Q5R2U8;H0Y5I9;Q5R2U5;H0Y4A7;Q5R2U4;H0Y4R9 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.2552 2 504.250892 1006.48723 88384.71 0.3389 0.00017089 0.35522 0.00017912 0.69412 0.00035001 504.251006385055 509.255109930427 81.381 0.40583 81.381 81.185 81.591 0 70 24 4 0 0 0 0.041927 1 44148 58.782 29.632 1 1.3413 1.1904 0 1276800 566890 709880 10777 2068 4101 4216 16836 16836 FESILPR 7 0 1 Unmodified _FESILPR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 431.2448 2 431.245078 860.475603 90869.11 -0.067439 -2.9083E-05 0.21215 9.1491E-05 0.14472 6.2408E-05 431.245041143912 436.249150482587 71.548 1.094 71.548 70.981 72.075 0 434 92 7 0 0 0 0.025872 2 41539 88.643 38.618 1 1.3263 1.5206 0 134620000 59673000 74949000 10778 1691 4102 4217 16837;16838 16838 FESILPR 7 0 1 Unmodified _FESILPR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 431.2448 2 431.245078 860.475603 90495.93 -0.066858 -2.8832E-05 0.34476 0.00014868 0.2779 0.00011984 431.245109256806 436.249117755611 70.164 1.3098 70.164 69.647 70.957 0 465 107 8 0 0 0 0.010057 2 41649 118.01 46.061 1 1.3088 1.5104 0 240450000 109580000 130870000 10779 1691 4102 4217 16839;16840 16840 FESILPR 7 0 1 Unmodified _FESILPR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 436.2491 2 431.245078 860.475603 92231.65 -0.19858 -8.5638E-05 0.43241 0.00018648 0.23383 0.00010084 431.245109250574 436.249209800689 81.264 1.1022 81.264 80.872 81.975 7.6294E-06 297 67 7 0 0 0 0.026711 1 43965 76.847 16.553 1 1.464 1.2427 0 9220000 3477100 5742900 10780 1691 4102 4217 16841 16841 FESLEPEMNNQASR 14 0 1 Oxidation (M) _FESLEPEM(ox)NNQASR_ FESLEPEM(1)NNQASR FESLEPEM(40.71)NNQASR 0 1 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.3698 2 834.370126 1666.7257 70064.78 0.58439 0.00048759 0.44537 0.0003716 1.0298 0.0008592 834.37030016324 839.374529669901 43.172 0.47639 43.172 42.897 43.374 0 82 36 5 0 0 0 0.0035101 1 23033 40.715 36.952 1 1.5946 1.6193 0 7579100 2301300 5277800 10781 415 4103 4218 16842 16842 302 FESLEPEMNNQASR 14 0 1 Oxidation (M) _FESLEPEM(ox)NNQASR_ FESLEPEM(1)NNQASR FESLEPEM(61.34)NNQASR 0 1 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.3736 2 834.370126 1666.7257 67258.51 0.90169 0.00075234 -0.19212 -0.0001603 0.70957 0.00059205 834.369892088563 839.875524279575 42.563 0.41774 42.563 42.291 42.709 -3.8147E-06 119 33 5 0 0 0 0.00017751 1 22822 61.344 58.724 1 1.6628 1.6458 0 15418000 4607000 10811000 10782 415 4103 4218 16843 16843 302 FESPEVAER 9 0 1 Unmodified _FESPEVAER_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;Q8TCM5 P52272 P52272 HNRNPM;ORF;HNRPM;DKFZp547H118 Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.2567 2 532.256371 1062.49819 83004.18 0.58482 0.00031127 -0.080367 -4.2776E-05 0.50445 0.0002685 532.256438905984 537.260407796681 38.413 0.81433 38.413 38.116 38.93 0 354 67 7 0 0 0 0.00034716 2 19640 101.25 89.484 1 1.4163 1.6678 0 236690000 87357000 149330000 10783 1599 4104 4219 16844;16845 16845 FESPEVAER 9 0 1 Unmodified _FESPEVAER_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;Q8TCM5 P52272 P52272 HNRNPM;ORF;HNRPM;DKFZp547H118 Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.2564 2 532.256371 1062.49819 82105.95 0.37273 0.00019839 -0.038032 -2.0243E-05 0.3347 0.00017815 532.256529626546 537.260365531888 37.465 0.80417 37.465 37.196 38 0 338 64 7 0 0 0 0.0021437 2 19414 76.221 65.332 1 1.4047 1.6243 0 263950000 103460000 160490000 10784 1599 4104 4219 16846;16847 16847 FESPEVAER 9 0 1 Unmodified _FESPEVAER_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;Q8TCM5 P52272 P52272 HNRNPM;ORF;HNRPM;DKFZp547H118 Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.261 2 532.256371 1062.49819 82289.94 0.4627 0.00024628 0.26327 0.00014013 0.72597 0.0003864 532.256497653799 537.260486044275 43.893 0.83548 43.893 43.563 44.399 0 322 56 8 0 0 0 0.032638 1 20832 44.98 44.98 1 1.0212 0.83495 0 13748000 7283600 6464000 10785 1599 4104 4219 16848 16848 FESPEVAER 9 0 1 Unmodified _FESPEVAER_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;Q8TCM5 P52272 P52272 HNRNPM;ORF;HNRPM;DKFZp547H118 Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.2603 2 532.256371 1062.49819 81691.15 0.50325 0.00026786 -0.18128 -9.6486E-05 0.32197 0.00017137 532.256296100857 537.260291122288 44.073 0.8073 44.073 43.761 44.569 0 288 46 8 0 0 0 0.012016 2 20251 57.859 51.755 1 1.0133 0.83213 0 13807000 6966700 6840000 10786 1599 4104 4219 16849;16850 16849 FETEQALR 8 0 1 Unmodified _FETEQALR_ 0 0 0 CON__Q04695;Q04695;F5GWP8;B4DE59 CON__Q04695;B4DE59 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.2535 2 497.253631 992.49271 NaN NaN NaN 0.15272 7.5941E-05 NaN NaN NaN NaN 37.812 0.67263 37.812 37.491 38.163 3.8147E-06 0 0 0 0.0041629 1 19360 91.626 40.66 1 NaN NaN 0 18647000 18647000 0 + 10787 1168;964 4105 4220 16851 16851 FETFQTITSYIK 12 1 0 Unmodified _FETFQTITSYIK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.3824 2 739.3823 1476.75005 71435.34 1.0991 0.00081265 -0.15192 -0.00011233 0.94718 0.00070033 739.382029529679 743.389315074031 111.39 0.63506 111.39 111.05 111.68 -7.6294E-06 215 45 9 0 0 0 1.0078E-12 2 70021 131.28 131.28 1 1.2419 1.2562 0 27517000 13577000 13940000 10788 1412 4106 4221 16852;16853 16852 FETFQTITSYIK 12 1 0 Unmodified _FETFQTITSYIK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8843 2 739.3823 1476.75005 71539.27 0.69848 0.00051645 -0.015464 -1.1434E-05 0.68302 0.00050501 739.883551181799 743.389411088048 110.81 0.63068 110.81 110.44 111.07 7.6294E-06 238 47 7 0 0 0 0.00022137 1 71227 88.681 81.035 1 1.359 1.3815 0 26237000 13331000 12906000 10789 1412 4106 4221 16854 16854 FETFQTITSYIK 12 1 0 Unmodified _FETFQTITSYIK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.3901 2 739.3823 1476.75005 71535.66 0.99925 0.00073882 -0.63025 -0.00046599 0.369 0.00027283 739.381912612513 743.389349134146 122.66 0.67934 122.66 122.38 123.06 0 146 33 8 0 0 0 2.1666E-05 2 73218 120.09 120.09 1 2.0616 1.6093 0 12022000 3637700 8384200 10790 1412 4106 4221 16855;16856 16856 FETFQTITSYIK 12 1 0 Unmodified _FETFQTITSYIK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.8849 2 739.3823 1476.75005 NaN NaN NaN -0.3449 -0.00025501 NaN NaN NaN NaN 122.5 0.57975 122.5 122.24 122.82 0 0 0 0 4.3358E-05 1 72083 96.015 75.238 1 NaN NaN 0 4250800 4250800 0 10791 1412 4106 4221 16857 16857 FETLQAQAGK 10 1 0 Unmodified _FETLQAQAGK_ 0 0 0 CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.7955 2 546.787838 1091.56112 81708.35 0.78072 0.00042689 -0.5746 -0.00031419 0.20611 0.0001127 546.787265867675 550.795263346666 35.617 0.6665 35.617 35.272 35.938 0 319 62 7 0 0 0 9.5484E-06 1 17791 105.57 82.139 1 1.1472 1.2942 0 132770000 58934000 73835000 + 10792 1171;1158 4107 4222 16858 16858 FETLQAQAGK 10 1 0 Unmodified _FETLQAQAGK_ 0 0 0 CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.7949 2 546.787838 1091.56112 82609.32 0.28617 0.00015647 -0.78013 -0.00042657 -0.49397 -0.00027009 546.787618783534 550.794760531238 40.469 0.97603 40.469 39.945 40.921 0 275 81 6 0 0 0 0.00097601 1 18159 78.192 62.53 1 1.1683 0.96441 0 11319000 5096200 6222900 + 10793 1171;1158 4107 4222 16859 16859 FEVNPVWK 8 1 0 Unmodified _FEVNPVWK_ 0 0 0 P17812;B4E1E0 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.281 2 509.77146 1017.52837 85902.36 0.41675 0.00021245 0.067525 3.4422E-05 0.48427 0.00024687 509.771390833242 513.778455927892 83.194 0.41949 83.194 82.95 83.369 0 129 37 5 0 0 0 0.024215 1 49714 56.011 56.011 1 1.774 1.8221 0 12966000 4476500 8490000 10794 1494 4108 4223 16860 16860 FEVNPVWK 8 1 0 Unmodified _FEVNPVWK_ 0 0 0 P17812;B4E1E0 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.2809 2 509.77146 1017.52837 84921.94 0.26757 0.0001364 0.73051 0.0003724 0.99808 0.00050879 509.771568359199 513.778573818525 82.099 0.46619 82.099 81.888 82.355 0 143 41 6 0 0 0 0.024215 1 50161 56.011 47.417 1 1.8249 1.9353 0 20404000 6351900 14052000 10795 1494 4108 4223 16861 16861 FFAPALISVSLPVR 14 0 1 Unmodified _FFAPALISVSLPVR_ 0 0 0 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.9481 2 758.947944 1515.88134 71215.43 0.97764 0.00074198 -0.026076 -1.979E-05 0.95156 0.00072219 758.947813447356 763.952200443742 130.8 0.74716 130.8 130.39 131.14 0 205 47 6 0 0 0 7.3204E-05 2 85139 89.548 89.548 1 0.73078 0.73936 0 7681600 4504600 3177000 10796 360 4109 4224 16862;16863 16863 FFAPALISVSLPVR 14 0 1 Unmodified _FFAPALISVSLPVR_ 0 0 0 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.9498 2 758.947944 1515.88134 71333.8 0.8489 0.00064427 0.06212 4.7146E-05 0.91102 0.00069142 758.947928392349 763.952147269215 130.32 0.79907 130.32 129.93 130.73 0 233 52 6 0 0 0 6.5745E-05 2 86911 90.685 90.685 1 0.7648 0.76232 0 8934600 4345000 4589700 10797 360 4109 4224 16864;16865 16865 FFAPALISVSLPVRK 15 1 1 Unmodified _FFAPALISVSLPVRK_ 0 0 1 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.0076 3 548.999376 1643.9763 83832.7 0.95002 0.00052156 -0.05834 -3.2029E-05 0.89168 0.00048953 548.999303569602 555.006808079003 128.52 0.43512 128.52 128.35 128.78 1.5259E-05 66 18 6 0 0 0 0.0076341 1 77581 27.208 27.208 1 1.7727 1.5966 0 1946800 741560 1205300 10798 360 4110 4225 16866 16866 FFDCDSLVCLCEFK 14 1 0 Unmodified _FFDCDSLVCLCEFK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 924.3997 2 920.391158 1838.76776 64389.28 1.0619 0.0009774 -0.20104 -0.00018503 0.8609 0.00079237 920.893061488877 924.398419445346 118.89 0.52254 118.89 118.63 119.16 7.6294E-06 176 30 9 0 0 0 3.3166E-09 3 76364 113.22 111.64 1 0.88726 0.86996 0 20672000 10788000 9883800 10799 580 4111 4226 16867;16868;16869 16869 FFDCDSLVCLCEFK 14 1 0 Unmodified _FFDCDSLVCLCEFK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 920.8938 2 920.391158 1838.76776 65290.05 0.46751 0.00043029 -0.0037915 -3.4897E-06 0.46372 0.0004268 920.892969625565 924.398686007781 118.43 0.47015 118.43 118.23 118.7 -7.6294E-06 170 28 9 0 0 0 4.0499E-06 2 77819 100.72 100.72 1 0.79626 0.83863 0 19823000 11094000 8728700 10800 580 4111 4226 16870;16871 16870 FFDCDSLVCLCEFK 14 1 0 Unmodified _FFDCDSLVCLCEFK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 920.3923 2 920.391158 1838.76776 63910.39 0.58871 0.00054184 -0.020468 -1.8839E-05 0.56824 0.00052301 920.391673730411 924.399401937533 130.83 1.134 130.83 130.27 131.41 0 257 53 10 0 0 0 0.00017456 2 79270 72.958 72.958 1 1.3102 1.0477 0 8870800 3878400 4992400 10801 580 4111 4226 16872;16873 16872 FFDCDSLVCLCEFK 14 1 0 Unmodified _FFDCDSLVCLCEFK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 924.8999 2 920.391158 1838.76776 63019.43 0.78803 0.00072529 -0.18355 -0.00016894 0.60448 0.00055636 920.391564933528 924.398925443017 130.67 1.0166 130.67 130.2 131.22 0 262 43 11 0 0 0 9.4858E-05 2 78249 86.114 82.582 1 1.4911 1.2025 0 13653000 5793300 7859400 10802 580 4111 4226 16874;16875 16875 FFDDPMLLELAK 12 1 0 Oxidation (M) _FFDDPM(ox)LLELAK_ FFDDPM(1)LLELAK FFDDPM(94.69)LLELAK 0 1 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;K7EP67 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.8651 2 727.865428 1453.7163 NaN NaN NaN -0.4047 -0.00029457 NaN NaN NaN NaN 117.16 0.77319 117.16 116.82 117.6 -7.6294E-06 0 0 0 1.5349E-05 1 74807 94.692 81.292 1 NaN NaN 0 6083400 6083400 0 10803 794 4112 4227 16876 16876 636 FFDDPMLLELAK 12 1 0 Oxidation (M) _FFDDPM(ox)LLELAK_ FFDDPM(1)LLELAK FFDDPM(90.83)LLELAK 0 1 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;K7EP67 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.8655 2 727.865428 1453.7163 NaN NaN NaN -0.1739 -0.00012658 NaN NaN NaN NaN 116.56 0.81818 116.56 116.33 117.15 0 0 0 0 8.2135E-05 1 76187 90.827 82.246 1 NaN NaN 0 8601100 8601100 0 10804 794 4112 4227 16877 16877 636 FFESFGDLSSADAILGNPK 19 1 0 Unmodified _FFESFGDLSSADAILGNPK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1008.4938 2 1007.99146 2013.96837 NaN NaN NaN 0.34972 0.00035251 NaN NaN NaN NaN 123.74 0.9388 123.74 123.49 124.43 0 0 0 0 1.0899E-31 1 80199 136.99 136.99 1 NaN NaN 0 70194000 70194000 0 + 10805 1172 4113 4228 16878 16878 FFESFGDLSSADAILGNPK 19 1 0 Unmodified _FFESFGDLSSADAILGNPK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1008.4935 2 1007.99146 2013.96837 NaN NaN NaN 0.30074 0.00030315 NaN NaN NaN NaN 123.41 1.0512 123.41 123.12 124.18 0 0 0 0 3.4438E-53 3 81853 157.52 157.52 1 NaN NaN 0 75447000 75447000 0 + 10806 1172 4113 4228 16879;16880;16881 16879 FFEVILIDPFHK 12 1 0 Unmodified _FFEVILIDPFHK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.9492 3 502.278139 1503.81259 85293.34 0.76156 0.00038251 -0.31121 -0.00015632 0.45034 0.0002262 502.277912916221 504.949277537239 126.57 1.0274 126.57 126.3 127.33 0 323 67 8 0 0 0 0.00036538 2 82272 59.57 59.57 1 0.93949 0.93964 0 26607000 14131000 12475000 10807 121 4114 4229 16882;16883 16883 FFEVILIDPFHK 12 1 0 Unmodified _FFEVILIDPFHK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.9216 2 752.91357 1503.81259 NaN NaN NaN 0.42296 0.00031845 NaN NaN NaN NaN 126.53 0.57074 126.53 126.36 126.93 0 0 0 0 3.1006E-08 1 82315 109.42 109.42 1 NaN NaN 0 6735500 0 6735500 10808 121 4114 4229 16884 16884 FFEVILIDPFHK 12 1 0 Unmodified _FFEVILIDPFHK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.6125 3 502.278139 1503.81259 NaN NaN NaN -0.30423 -0.00015281 NaN NaN NaN NaN 127.31 0.85342 127.31 127.07 127.92 7.6294E-06 0 0 0 0.01031 1 83122 37.426 31.942 1 NaN NaN 0 2897800 2897800 0 10809 121 4114 4229 16885 16885 FFEVILIDPFHK 12 1 0 Unmodified _FFEVILIDPFHK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.2784 3 502.278139 1503.81259 85550.7 0.62496 0.0003139 -0.16785 -8.4305E-05 0.45711 0.0002296 502.278007971262 504.949364669055 126.08 1.4689 126.08 125.8 127.27 0 436 92 10 0 0 0 0.0050991 1 83902 42.095 42.095 1 0.87431 0.9864 0 66174000 36293000 29881000 10810 121 4114 4229 16886 16886 FFEVILIDPFHK 12 1 0 Unmodified _FFEVILIDPFHK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.9204 2 752.91357 1503.81259 69495.29 0.94631 0.00071249 0.7522 0.00056634 1.6985 0.0012788 753.415299416117 756.920903911254 126.13 1.4916 126.13 125.81 127.3 0 317 93 8 0 0 0 5.0945E-08 1 83971 113.93 113.93 1 0.5617 0.6333 0 61554000 34482000 27072000 10811 121 4114 4229 16887 16887 FFEVILIDPFHK 12 1 0 Unmodified _FFEVILIDPFHK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.6124 3 502.278139 1503.81259 84499.26 0.47567 0.00023892 -0.18138 -9.1105E-05 0.29429 0.00014782 502.278029102356 504.949368684045 134.68 0.16075 134.68 134.59 134.75 0 22 3 8 0 0 0 0.00030231 1 82372 62.924 62.924 1 0.80266 0.67327 0 52354000 28586000 23768000 10812 121 4114 4229 16888 16888 FFEVILIDPFHK 12 1 0 Unmodified _FFEVILIDPFHK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 502.2784 3 502.278139 1503.81259 83786.47 0.46591 0.00023402 0.18205 9.1441E-05 0.64796 0.00032546 502.278078991756 504.949514373358 134.64 0.1792 134.64 134.53 134.71 0 23 4 8 0 0 0 0.00050443 2 81432 60.628 60.628 1 0.79311 0.66936 0 55756000 31483000 24273000 10813 121 4114 4229 16889;16890 16889 FFEVILIDPFHK 12 1 0 Unmodified _FFEVILIDPFHK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.9218 2 752.91357 1503.81259 69539.01 0.76877 0.00057882 0.51961 0.00039122 1.2884 0.00097004 752.91388015968 757.422774925969 134.65 0.35007 134.65 134.5 134.85 0 29 8 7 0 0 0 8.1241E-05 2 81435 96.89 95.573 1 0.9115 0.75972 0 40885000 21262000 19622000 10814 121 4114 4229 16891;16892 16892 FFFDPSAR 8 0 1 Unmodified _FFFDPSAR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.7396 2 493.74016 985.465767 87397.3 0.54505 0.00026911 -0.3506 -0.00017311 0.19445 9.6007E-05 493.73961740148 498.744078159373 86.572 0.55055 86.572 86.285 86.835 0 127 40 6 0 0 0 0.022274 1 52162 57.281 39.245 1 1.7079 1.751 0 25929000 9754700 16175000 10815 397;1622 4115 4230 16893 16893 FFGGYVPEMVLTPDDQR 17 0 1 Oxidation (M) _FFGGYVPEM(ox)VLTPDDQR_ FFGGYVPEM(1)VLTPDDQR FFGGYVPEM(41.24)VLTPDDQR 0 1 0 A8K492;P56192;B4DF61;H0YIP0 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 998.9724 2 993.966933 1985.91931 NaN NaN NaN 0.22209 0.00022075 NaN NaN NaN NaN 108.78 0.27609 108.78 108.6 108.88 0 0 0 0 0.0047335 1 69687 41.242 28.882 1 NaN NaN 0 6777600 0 6777600 10816 732 4116 4231 16894 16894 567 FFGQHDR 7 0 1 Unmodified _FFGQHDR_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q5JV90;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 306.1483 3 302.812076 905.4144 110351.8 0.14327 4.3383E-05 -0.077006 -2.3318E-05 0.066262 2.0065E-05 302.811986740258 306.148148265451 21.601 0.33623 21.601 21.464 21.801 0 32 16 4 0 0 0 0.03231 1 7744 36.395 29.165 1 0.65598 0.65501 0 6998600 4187800 2810800 10817 422;1317 4117 4232 16895 16895 FFGTAVTCLLSPHSQVLTAATQSLK 25 1 0 Unmodified _FFGTAVTCLLSPHSQVLTAATQSLK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.4743 3 893.138784 2676.39452 65578.45 0.89823 0.00080224 -0.33527 -0.00029944 0.56296 0.0005028 893.472138328287 896.144468221742 123.22 0.5822 123.22 122.98 123.57 0 192 45 7 0 0 0 0.0010198 1 79944 25.157 25.157 1 1.0034 0.98871 0 8563700 3588300 4975300 10818 907 4118 4233 16896 16896 FFGTAVTCLLSPHSQVLTAATQSLK 25 1 0 Unmodified _FFGTAVTCLLSPHSQVLTAATQSLK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.1447 3 893.138784 2676.39452 64777.76 0.77266 0.00069009 -0.91904 -0.00082083 -0.14639 -0.00013074 893.471674087364 896.143450050187 122.56 0.36842 122.56 122.42 122.79 7.6294E-06 154 30 6 0 0 0 1.3922E-06 3 81378 46.982 46.982 1 1.0873 1.1394 0 10756000 4557400 6198300 10819 907 4118 4233 16897;16898;16899 16898 FFGTAVTCLLSPHSQVLTAATQSLK 25 1 0 Unmodified _FFGTAVTCLLSPHSQVLTAATQSLK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.1446 3 893.138784 2676.39452 64052.8 1.1133 0.00099431 -0.16777 -0.00014984 0.9455 0.00084447 893.473513342163 896.14471408168 134.33 0.20441 134.33 134.2 134.41 0 40 9 7 0 0 0 0.00064828 1 81980 29.47 29.47 1 1.4725 1.1418 0 12895000 4785800 8108800 10820 907 4118 4233 16900 16900 FFGTEDHAWIK 11 1 0 Unmodified _FFGTEDHAWIK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.8872 3 450.887422 1349.64044 90496.45 -0.052211 -2.3541E-05 0.16536 7.4558E-05 0.11315 5.1017E-05 450.887476892411 453.558745330823 74.837 0.75026 74.837 74.562 75.312 0 221 67 5 0 0 0 0.002653 1 45051 45.661 31.892 1 1.191 1.2188 0 25648000 10563000 15085000 10821 1194;1193;1346 4119 4234 16901 16901 FFHLAFEEEFGR 12 0 1 Unmodified _FFHLAFEEEFGR_ 0 0 0 Q5U0F4;Q53HU7;Q13347;Q9P1D9 Q5U0F4 Q5U0F4 EIF3I Eukaryotic translation initiation factor 3 subunit I ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.5817 3 510.245498 1527.71466 NaN NaN NaN -0.28305 -0.00014443 NaN NaN NaN NaN 107.81 0.23354 107.81 107.64 107.87 7.6294E-06 0 0 0 0.048856 1 68887 29.303 17.138 1 NaN NaN 0 1380800 0 1380800 10822 1711 4120 4235 16902 16902 FFLLENVR 8 0 1 Unmodified _FFLLENVR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.2927 2 519.292559 1036.57057 87043.66 0.48074 0.00024964 -0.17987 -9.3404E-05 0.30087 0.00015624 519.292483868887 524.296407292884 105.48 0.69316 105.48 105.2 105.89 7.6294E-06 174 53 4 0 0 0 0.011407 1 65175 69.998 55.586 1 0.54306 0.55162 0 18297000 11635000 6662600 10823 222 4121 4236 16903 16903 FFLLENVR 8 0 1 Unmodified _FFLLENVR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.2923 2 519.292559 1036.57057 86877.9 0.63586 0.0003302 -0.22756 -0.00011817 0.40831 0.00021203 519.292483021953 524.296335783005 104.69 0.79549 104.69 104.26 105.05 -7.6294E-06 212 62 5 0 0 0 0.0086589 2 66144 77.674 66.306 1 0.52403 0.51901 0 12230000 8744100 3486000 10824 222 4121 4236 16904;16905 16904 FFLSLYGHK 9 1 0 Unmodified _FFLSLYGHK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.3007 2 556.300384 1110.58622 80873.26 0.74837 0.00041632 0.51873 0.00028857 1.2671 0.00070489 556.300250984544 560.307306595526 86.331 0.7216 86.331 85.975 86.697 -7.6294E-06 185 56 6 0 0 0 0.0042156 2 51890 69.825 33.945 1 1.6055 1.6571 0 29038000 12693000 16345000 10825 1827 4122 4237 16906;16907 16907 FFLSLYGHK 9 1 0 Unmodified _FFLSLYGHK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 373.8754 3 371.202682 1110.58622 102262 0.42389 0.00015735 0.38606 0.00014331 0.80995 0.00030066 371.537124053421 373.874146094586 86.276 0.45605 86.276 86.09 86.546 0 69 34 4 0 0 0 0.0089336 3 51938 39.305 31.084 1 0.54518 0.53691 0 9134100 3571000 5563100 10826 1827 4122 4237 16908;16909;16910 16909 FFLSLYGHK 9 1 0 Unmodified _FFLSLYGHK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.308 2 556.300384 1110.58622 NaN NaN NaN 1.0342 0.00057531 NaN NaN NaN NaN 86.867 0.38651 86.867 86.697 87.083 0 0 0 0 0.0094298 1 52401 67.169 40.567 1 NaN NaN 0 6674800 0 6674800 10827 1827 4122 4237 16911 16911 FFLSLYGHK 9 1 0 Unmodified _FFLSLYGHK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.3084 2 556.300384 1110.58622 NaN NaN NaN 0.56012 0.0003116 NaN NaN NaN NaN 84.551 0.87274 84.551 84.038 84.911 0 0 0 0 0.020367 1 51612 58.596 31.994 1 NaN NaN 0 16581000 0 16581000 10828 1827 4122 4237 16912 16912 FFMGNQVLK 9 1 0 Oxidation (M) _FFM(ox)GNQVLK_ FFM(1)GNQVLK FFM(68.42)GNQVLK 0 1 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.2915 2 550.283877 1098.5532 79326.35 0.53941 0.00029683 0.12768 7.026E-05 0.66709 0.00036709 550.283896765362 554.290942457886 64.332 1.4263 64.332 63.344 64.77 0 435 132 6 0 0 0 0.0023105 2 36863 68.422 56.065 1 0.57546 0.62472 0 46043000 28214000 17828000 10829 1476 4123 4238 16913;16914 16913 1219 FFMGNQVLK 9 1 0 Oxidation (M) _FFM(ox)GNQVLK_ FFM(1)GNQVLK FFM(72.14)GNQVLK 0 1 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.2844 2 550.283877 1098.5532 79446.01 0.46367 0.00025515 -0.1771 -9.7458E-05 0.28656 0.00015769 550.283811044486 554.290701961204 62.533 0.83108 62.533 61.872 62.703 0 303 76 6 0 0 0 0.0016002 2 36581 72.138 62.152 1 0.59825 0.67436 0 60891000 34006000 26885000 10830 1476 4123 4238 16915;16916 16916 1219 FFMGNQVLK 9 1 0 Oxidation (M) _FFM(ox)GNQVLK_ FFM(1)GNQVLK FFM(102.71)GNQVLK 0 1 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.2844 2 550.283877 1098.5532 79412.69 0.34255 0.0001885 0.25594 0.00014084 0.59849 0.00032934 550.283998668871 554.29094750905 62.871 0.87519 62.871 62.622 63.497 3.8147E-06 301 75 5 0 0 0 0.00014834 2 37066 102.71 87.938 1 0.55528 0.61618 0 48570000 30448000 18122000 10831 1476 4123 4238 16917;16918 16918 1219 FFNYVPSGIR 10 0 1 Unmodified _FFNYVPSGIR_ 0 0 0 Q969X6;H3BPD7 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.3184 2 600.314023 1198.61349 78544.66 0.78508 0.00047129 0.041819 2.5104E-05 0.8269 0.0004964 600.314047801726 605.318169407267 92.382 1.0486 92.382 91.938 92.987 0 532 99 8 0 0 0 0.00034412 2 55980 89.355 79.767 1 0.85637 0.95895 0 89567000 48076000 41490000 10832 1955 4124 4239 16919;16920 16920 FFNYVPSGIR 10 0 1 Unmodified _FFNYVPSGIR_ 0 0 0 Q969X6;H3BPD7 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.3181 2 600.314023 1198.61349 79380.23 0.73234 0.00043963 0.2537 0.0001523 0.98604 0.00059193 600.31408928493 605.318282698039 91.534 1.3656 91.534 90.958 92.324 0 475 119 6 0 0 0 1.4912E-05 2 56553 101.54 87.385 1 0.86348 0.9902 0 81818000 43878000 37940000 10833 1955 4124 4239 16921;16922 16922 FFNYVPSGIR 10 0 1 Unmodified _FFNYVPSGIR_ 0 0 0 Q969X6;H3BPD7 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.3186 2 600.314023 1198.61349 78483.23 0.60776 0.00036485 0.077665 4.6623E-05 0.68543 0.00041147 600.314160227074 605.318229068121 105.56 1.2994 105.56 105.08 106.38 0 320 75 6 0 0 0 0.0080781 2 60223 56.563 51.404 1 1.1982 0.99811 0 10665000 5026300 5638300 10834 1955 4124 4239 16923;16924 16924 FFNYVPSGIR 10 0 1 Unmodified _FFNYVPSGIR_ 0 0 0 Q969X6;H3BPD7 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.3186 2 600.314023 1198.61349 79373.37 0.59824 0.00035913 0.087174 5.2332E-05 0.68541 0.00041146 600.314131287105 605.318252998463 105.33 1.1691 105.33 104.85 106.02 -7.6294E-06 337 77 6 0 0 0 0.0080781 1 59229 56.563 51.253 1 1.1822 0.97145 0 8639900 4100100 4539800 10835 1955 4124 4239 16925 16925 FFPGHESR 8 0 1 Unmodified _FFPGHESR_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 326.1594 3 326.159365 975.456264 106260.2 -0.031966 -1.0426E-05 0.023224 7.5747E-06 -0.0087419 -2.8512E-06 326.159313663598 329.495364197146 23.421 0.68493 23.421 23.164 23.849 0 146 32 7 0 0 0 0.0042356 2 9330 56.81 53.317 1 0.94618 0.97526 0 24449000 11857000 12592000 10836 1955 4125 4240 16926;16927 16927 FFPGHESR 8 0 1 Unmodified _FFPGHESR_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9 Q969X6 Q969X6 CIRH1A Cirhin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.7395 2 488.735409 975.456264 NaN NaN NaN 0.35649 0.00017423 NaN NaN NaN NaN 23.407 0.62358 23.407 23.145 23.769 0 0 0 0 0.012676 1 9378 73.26 41.971 1 NaN NaN 0 15414000 0 15414000 10837 1955 4125 4240 16928 16928 FFPGHESR 8 0 1 Unmodified _FFPGHESR_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 326.1593 3 326.159365 975.456264 105105.8 -0.22245 -7.2554E-05 0.35151 0.00011465 0.12906 4.2095E-05 326.159421161695 329.495471374511 22.952 0.88925 22.952 22.513 23.402 0 169 38 8 0 0 0 0.0023086 2 8858 73.665 73.665 1 0.9065 0.99288 0 31878000 16213000 15665000 10838 1955 4125 4240 16929;16930 16930 FFPLIEVNK 9 1 0 Unmodified _FFPLIEVNK_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.8156 2 553.815867 1105.61718 81712.48 0.6632 0.00036729 -0.24718 -0.00013689 0.41602 0.0002304 553.815759467034 557.822843532626 108.27 0.68412 108.27 107.89 108.57 -7.6294E-06 190 53 5 0 0 0 0.019553 1 67613 51.059 51.059 1 0.63571 0.66176 0 14921000 8585800 6334800 10839 1525 4126 4241 16931 16931 FFQEENTEK 9 1 0 Unmodified _FFQEENTEK_ 0 0 0 A0A0S2Z489;O00232;A0A0S2Z476 A0A0S2Z489 A0A0S2Z489 PSMD12 26S proteasome non-ATPase regulatory subunit 12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.2733 2 586.266936 1170.51932 NaN NaN NaN -1.5661 -0.00091818 NaN NaN NaN NaN 29.583 0.17318 29.583 29.504 29.677 1.9073E-06 0 0 0 0.037489 1 14396 51.059 42.527 1 NaN NaN 0 15899000 0 15899000 10840 558 4127 4242 16932 16932 FFQEENTEK 9 1 0 Unmodified _FFQEENTEK_ 0 0 0 A0A0S2Z489;O00232;A0A0S2Z476 A0A0S2Z489 A0A0S2Z489 PSMD12 26S proteasome non-ATPase regulatory subunit 12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.2739 2 586.266936 1170.51932 NaN NaN NaN -0.90782 -0.00053223 NaN NaN NaN NaN 29.111 0.17219 29.111 29.032 29.205 0 0 0 0 0.00013872 1 13987 96.624 83.635 1 NaN NaN 0 15716000 0 15716000 10841 558 4127 4242 16933 16933 FFQGSQEFLASASASAER 18 0 1 Unmodified _FFQGSQEFLASASASAER_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 971.9617 2 966.957954 1931.90136 NaN NaN NaN 0.14475 0.00013997 NaN NaN NaN NaN 94.666 0.37492 94.666 94.521 94.896 0 0 0 0 6.6627E-06 1 57450 71.513 65.41 1 NaN NaN 0 6832100 0 6832100 10842 1873 4128 4243 16934 16934 FFQGSQEFLASASASAER 18 0 1 Unmodified _FFQGSQEFLASASASAER_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 972.0176 2 966.957954 1931.90136 63611.04 0.41141 0.00039782 0.23984 0.00023191 0.65125 0.00062973 966.958179214145 971.962290618742 93.939 0.45068 93.939 93.698 94.148 0 102 38 5 0 0 0 2.3681E-05 1 58416 70.412 70.412 1 1.4237 1.409 0 15394000 7216400 8177600 10843 1873 4128 4243 16935 16935 FFQGSQEFLASASASAER 18 0 1 Unmodified _FFQGSQEFLASASASAER_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 967.4573 2 966.957954 1931.90136 62091.33 0.12474 0.00012062 0.69469 0.00067174 0.81943 0.00079236 967.459643570681 971.962899415962 108.07 0.57625 108.07 107.84 108.42 0 106 30 6 0 0 0 0.014244 1 61938 25.718 22.495 1 1.2398 1.0369 0 3206900 1417700 1789200 10844 1873 4128 4243 16936 16936 FFSGYGR 7 0 1 Unmodified _FFSGYGR_ 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3;B5BU15 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6;SFRS6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.2007 2 417.20067 832.386788 93099.73 0.40074 0.00016719 1.3473 0.00056208 1.748 0.00072927 417.200979184926 422.205327418114 42.658 0.84499 42.658 42.549 43.394 0 261 68 7 0 0 0 0.0012452 2 22704 137.44 137.44 1 1.4331 1.6375 0 124930000 46460000 78474000 10845 748 4129 4244 16937;16938 16938 FFTDDLFQYAGEK 13 1 0 Unmodified _FFTDDLFQYAGEK_ 0 0 0 B2WTI3;B2WTI4;K7EJU9;A0A0S2PZM4;Q6NYC1 B2WTI3 B2WTI3 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.375 2 790.867014 1579.71947 73076.63 0.99418 0.00078627 -1.1026 -0.00087205 -0.10846 -8.5779E-05 791.368355633392 794.872514284735 115.94 0.42382 115.94 115.72 116.14 0 104 24 6 0 0 0 7.4082E-06 1 73940 103.34 96.453 1 1.4259 1.4247 0 7777400 3186300 4591100 10846 543 4130 4245 16939 16939 FFTDDLFQYAGEK 13 1 0 Unmodified _FFTDDLFQYAGEK_ 0 0 0 B2WTI3;B2WTI4;K7EJU9;A0A0S2PZM4;Q6NYC1 B2WTI3 B2WTI3 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.873 2 790.867014 1579.71947 73461.26 0.93316 0.000738 -0.84342 -0.00066703 0.089736 7.0969E-05 790.866467491153 794.873023423882 115.41 0.48254 115.41 115.24 115.72 0 108 30 6 0 0 0 7.5482E-05 1 75269 94.616 88.376 1 1.6846 1.7213 0 11965000 3966800 7998400 10847 543 4130 4245 16940 16940 FFTESR 6 0 1 Unmodified _FFTESR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 398.6968 2 393.692678 785.370804 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.592 1 30.592 30.092 31.092 1.9073E-06 0 0 0 0.041196 1 14978 77.748 39.546 1 10848 618 4131 4246 16941 16941 FFTTPSK 7 1 0 Unmodified _FFTTPSK_ 0 0 0 O76021 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.2255 2 414.218529 826.422505 93565.93 0.31922 0.00013223 0.078914 3.2688E-05 0.39814 0.00016492 414.218524256698 418.225509991664 38.952 1.0462 38.952 38.591 39.637 3.8147E-06 393 85 6 0 0 0 0.010632 3 20148 110.61 91.927 1 0.65454 0.77627 0 493050000 288600000 204450000 10849 1415 4132 4247 16942;16943;16944 16943 FFTTPSK 7 1 0 Unmodified _FFTTPSK_ 0 0 0 O76021 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.2256 2 414.218529 826.422505 93660.03 0.035498 1.4704E-05 -0.010645 -4.4095E-06 0.024852 1.0294E-05 414.218489422205 418.225456341635 38.01 1.1257 38.01 37.682 38.807 0 368 91 6 0 0 0 0.010632 2 19894 110.61 91.927 1 0.60461 0.7137 0 985410000 562380000 423030000 10850 1415 4132 4247 16945;16946 16946 FFVADTANEALEAAK 15 1 0 Unmodified _FFVADTANEALEAAK_ 0 0 0 A0A024R325;Q96I99;E9PDQ8 A0A024R325 A0A024R325 SUCLG2 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.4066 2 798.898845 1595.78314 NaN NaN NaN 0.44694 0.00035706 NaN NaN NaN NaN 98.36 0.53867 98.36 98.093 98.631 0 0 0 0 0.0020411 1 61444 64.121 57.685 1 NaN NaN 0 12627000 0 12627000 10851 126 4133 4248 16947 16947 FFVAPFPEVFGK 12 1 0 Unmodified _FFVAPFPEVFGK_ 0 0 0 CON__P02662 CON__P02662 CON__P02662 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.869 2 692.868631 1383.72271 NaN NaN NaN -0.019253 -1.3339E-05 NaN NaN NaN NaN 127.54 0.7807 127.54 127.24 128.02 0 0 0 0 0.00016705 2 82962 91.867 84.387 1 NaN NaN 0 17356000 17356000 0 + 10852 1151 4134 4249 16948;16949 16948 FFVAPFPEVFGK 12 1 0 Unmodified _FFVAPFPEVFGK_ 0 0 0 CON__P02662 CON__P02662 CON__P02662 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.8691 2 692.868631 1383.72271 NaN NaN NaN 0.024526 1.6993E-05 NaN NaN NaN NaN 127.1 0.81868 127.1 126.76 127.58 0 0 0 0 2.0553E-05 2 84693 101.11 95.623 1 NaN NaN 0 21420000 21420000 0 + 10853 1151 4134 4249 16950;16951 16950 FGAEDLFK 8 1 0 Unmodified _FGAEDLFK_ 0 0 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.7409 2 463.734543 925.454533 90908.14 0.45908 0.00021289 0.52238 0.00024224 0.98146 0.00045514 463.735105762203 467.74147333629 87.928 0.30313 87.928 87.699 88.002 0 57 21 4 0 0 0 0.0099928 2 54253 73.26 51.129 1 0.84666 0.8619 0 26107000 14732000 11375000 10854 354 4135 4250 16952;16953 16953 FGAPPHAGGGIGLER 15 0 1 Unmodified _FGAPPHAGGGIGLER_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;H7BZ35 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.5891 3 479.252875 1434.7368 NaN NaN NaN 0.57932 0.00027764 NaN NaN NaN NaN 53.042 0.60592 53.042 52.886 53.492 3.8147E-06 0 0 0 0.0015281 1 29598 55.885 48.161 1 NaN NaN 0 34097000 0 34097000 10855 610 4136 4251 16954 16954 FGAPPHAGGGIGLER 15 0 1 Unmodified _FGAPPHAGGGIGLER_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;H7BZ35 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.5892 3 479.252875 1434.7368 86552.16 0.07164 3.4334E-05 0.26909 0.00012896 0.34073 0.00016329 479.253289784265 482.589016049056 51.848 0.65106 51.848 51.599 52.25 0 244 51 6 0 0 0 0.00097854 1 29399 37.177 34.31 1 1.3746 1.5546 0 47585000 21572000 26013000 10856 610 4136 4251 16955 16955 FGAQQDTIEVPEK 13 1 0 Unmodified _FGAQQDTIEVPEK_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3719 2 731.364638 1460.71472 71943.41 0.60044 0.00043914 -0.49176 -0.00035965 0.10869 7.949E-05 731.364801676672 735.371982744007 63.178 0.55497 63.178 62.914 63.469 0 163 53 5 0 0 0 0.0001891 1 36197 71.03 65.059 1 2.1639 2.201 0 13313000 3767000 9545800 10857 955 4137 4252 16956 16956 FGAQQDTIEVPEK 13 1 0 Unmodified _FGAQQDTIEVPEK_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3716 2 731.364638 1460.71472 72945.09 0.65528 0.00047925 0.10856 7.9395E-05 0.76384 0.00055864 731.36493388621 735.371880399376 62.239 0.5496 62.239 61.94 62.49 0 229 51 6 0 0 0 9.9151E-09 1 36380 115.18 100.48 1 2.1506 2.1535 0 15660000 5423800 10236000 10858 955 4137 4252 16957 16957 FGAQQDTIEVPEK 13 1 0 Unmodified _FGAQQDTIEVPEK_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.3724 2 731.364638 1460.71472 70607.4 0.6293 0.00046025 -0.97365 -0.00071209 -0.34435 -0.00025185 731.364628635477 735.371603956655 73.014 0.56242 73.014 72.767 73.33 0 103 35 5 0 0 0 0.010118 1 38589 42.041 36.069 1 1.0321 0.81146 0 3128900 1457700 1671200 10859 955 4137 4252 16958 16958 FGAQQDTIEVPEK 13 1 0 Unmodified _FGAQQDTIEVPEK_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.3721 2 731.364638 1460.71472 71764.05 0.60007 0.00043887 -0.82541 -0.00060367 -0.22533 -0.0001648 731.364708150391 735.371762213187 73.593 0.44905 73.593 73.339 73.788 0 106 28 5 0 0 0 0.0082161 1 38104 44.188 38.216 1 1.1857 0.9612 0 2772500 1449800 1322600 10860 955 4137 4252 16959 16959 FGDPECQVILPLLK 14 1 0 Unmodified _FGDPECQVILPLLK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.9468 2 814.939459 1627.86436 67221.76 0.71174 0.00058002 -0.4161 -0.0003391 0.29564 0.00024093 814.939434680636 818.946495073751 122.12 0.55932 122.12 121.87 122.43 0 222 38 9 0 0 0 3.6498E-14 3 78919 126.19 126.19 1 2.2104 2.1755 0 23989000 7359700 16630000 10861 1507 4138 4253 16960;16961;16962 16961 FGDPECQVILPLLK 14 1 0 Unmodified _FGDPECQVILPLLK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.9468 2 814.939459 1627.86436 67078.97 0.7701 0.00062759 -0.19956 -0.00016263 0.57055 0.00046496 814.939508920947 818.946446706389 121.6 0.60386 121.6 121.34 121.95 -7.6294E-06 228 44 7 0 0 0 7.6916E-10 1 80433 122.51 122.51 1 2.1481 2.1777 0 29469000 8888200 20581000 10862 1507 4138 4253 16963 16963 FGDPECQVILPLLK 14 1 0 Unmodified _FGDPECQVILPLLK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.9469 2 814.939459 1627.86436 68596.35 1.2225 0.00099624 -0.25609 -0.00020869 0.96638 0.00078754 814.939266076791 818.946449070529 134.19 0.34367 134.19 134.02 134.36 0 74 18 7 0 0 0 0.001083 1 80939 56.225 56.225 1 1.33 1.0819 0 7079300 2755600 4323600 10863 1507 4138 4253 16964 16964 FGDPVVQSDMK 11 1 0 Oxidation (M) _FGDPVVQSDM(ox)K_ FGDPVVQSDM(1)K FGDPVVQSDM(106.4)K 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4E388;B4DNX1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.7904 2 619.789721 1237.56489 75731.14 0.91439 0.00056673 -0.36179 -0.00022423 0.5526 0.0003425 619.789570104598 623.796570130085 41.451 0.9079 41.451 40.972 41.88 0 417 75 8 0 0 0 7.8505E-06 3 21728 106.4 86.623 1 0.89545 1.01 0 131530000 77998000 53535000 10864 533 4139 4254 16965;16966;16967 16967 393 FGDPVVQSDMK 11 1 0 Oxidation (M) _FGDPVVQSDM(ox)K_ FGDPVVQSDM(1)K FGDPVVQSDM(73.5)K 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4E388;B4DNX1 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.7899 2 619.789721 1237.56489 76395.16 0.5244 0.00032502 -0.11235 -6.9635E-05 0.41204 0.00025538 619.789790126879 623.7967257137 40.381 0.54592 40.381 39.959 40.505 0 264 46 7 0 0 0 0.00031735 2 21381 73.499 57.618 1 0.68121 0.76765 0 124120000 77165000 46951000 10865 533 4139 4254 16968;16969 16969 393 FGEAIGMGFPVK 12 1 0 Oxidation (M) _FGEAIGM(ox)GFPVK_ FGEAIGM(1)GFPVK FGEAIGM(67.56)GFPVK 0 1 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9;B4DM07 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8293 2 634.820824 1267.62709 79914.1 0.81942 0.00052018 0.39021 0.00024771 1.2096 0.00076789 635.321896985153 638.828113035932 87.042 0.33467 87.042 86.763 87.098 7.6294E-06 66 22 4 0 0 0 0.00032416 1 52471 67.563 59.242 1 2.5961 2.6788 0 10944000 5695800 5248400 10866 789 4140 4255 16970 16970 628 FGEAIGMGFPVK 12 1 0 Oxidation (M) _FGEAIGM(ox)GFPVK_ FGEAIGM(1)GFPVK FGEAIGM(72.64)GFPVK 0 1 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9;B4DM07 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.8209 2 634.820824 1267.62709 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.165 1 87.165 86.665 87.665 0 0 0 0 0.00048167 1 52621 72.643 54.418 1 10867 789 4140 4255 16971 16971 628 FGEAIGMGFPVK 12 1 0 Oxidation (M) _FGEAIGM(ox)GFPVK_ FGEAIGM(1)GFPVK FGEAIGM(62.82)GFPVK 0 1 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9;B4DM07 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.8204 2 634.820824 1267.62709 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.349 1 86.349 85.849 86.849 -7.6294E-06 0 0 0 0.002714 1 53223 62.823 44.959 1 10868 789 4140 4255 16972 16972 628 FGEINDQDR 9 0 1 Unmodified _FGEINDQDR_ 0 0 0 H3BNC0;A0A024R6Z2;A0A024R726;Q9NVM4 H3BNC0 H3BNC0 PRMT7 Protein arginine N-methyltransferase 7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.2548 2 547.249077 1092.4836 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.423 1 29.423 28.923 29.923 3.8147E-06 0 0 0 0.0028494 1 14245 80.219 53.617 1 10869 211 4141 4256 16973 16973 FGESTTGFNFSFK 13 1 0 Unmodified _FGESTTGFNFSFK_ 0 0 0 P49792 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.8468 2 734.840799 1467.66705 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.28 1 104.28 103.78 104.78 7.6294E-06 0 0 0 0.0082577 1 66046 55.401 46.043 1 10870 1588 4142 4257 16974 16974 FGEVSDVEIITR 12 0 1 Unmodified _FGEVSDVEIITR_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;F5GWN9;A0A0A0MSJ1;F5H8B8;F5H532;F5H0I5;F5GXV1 A0A024R250 A0A024R250 NOL8 Nucleolar protein 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.8616 2 682.856449 1363.69835 NaN NaN NaN -0.5017 -0.00034259 NaN NaN NaN NaN 91.711 0.73396 91.711 91.295 92.029 0 0 0 0 0.0019225 1 56786 72.531 58.413 1 NaN NaN 0 13975000 0 13975000 10871 104 4143 4258 16975 16975 FGEVSDVEIITR 12 0 1 Unmodified _FGEVSDVEIITR_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;F5GWN9;A0A0A0MSJ1;F5H8B8;F5H532;F5H0I5;F5GXV1 A0A024R250 A0A024R250 NOL8 Nucleolar protein 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.8566 2 682.856449 1363.69835 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.717 1 91.717 91.217 92.217 -7.6294E-06 0 0 0 0.0014428 1 56794 82.171 60.085 1 10872 104 4143 4258 16976 16976 FGEVVLQPPELTAR 14 0 1 Unmodified _FGEVVLQPPELTAR_ 0 0 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.4331 2 778.427573 1554.84059 70727.01 0.84584 0.00065843 0.91991 0.00071609 1.7658 0.0013745 779.43169709468 783.432160440511 107.41 0.60883 107.41 107.11 107.72 0 251 45 8 0 0 0 0.00011813 2 66870 82.171 82.171 1 0.70524 0.73311 0 20931000 13193000 7737600 10873 1307 4144 4259 16977;16978 16978 FGEVVLQPPELTAR 14 0 1 Unmodified _FGEVVLQPPELTAR_ 0 0 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.4343 2 778.427573 1554.84059 70792.37 0.81953 0.00063794 0.90562 0.00070496 1.7251 0.0013429 778.427647598319 783.432018155811 106.82 0.6974 106.82 106.51 107.2 -7.6294E-06 278 51 8 0 0 0 4.8873E-05 3 68052 93.258 93.258 1 0.69406 0.75149 0 27338000 18605000 8733500 10874 1307 4144 4259 16979;16980;16981 16981 FGEVVLQPPELTAR 14 0 1 Unmodified _FGEVVLQPPELTAR_ 0 0 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.9337 2 778.427573 1554.84059 70814.34 0.87171 0.00067856 0.26721 0.000208 1.1389 0.00088656 778.427674948809 783.432017486279 118.64 0.59154 118.64 118.28 118.88 0 144 28 6 0 0 0 0.0029953 2 69998 47.894 47.894 1 0.85659 0.72108 0 4558000 2687400 1870600 10875 1307 4144 4259 16982;16983 16982 FGEVVLQPPELTAR 14 0 1 Unmodified _FGEVVLQPPELTAR_ 0 0 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.4321 2 778.427573 1554.84059 71415.27 0.7527 0.00058592 0.18077 0.00014072 0.93347 0.00072664 778.427646036147 783.431819483608 118.36 0.61662 118.36 118.07 118.68 7.6294E-06 137 29 6 0 0 0 0.0073745 2 68916 43.628 43.628 1 1.0265 0.87103 0 4642700 2289200 2353500 10876 1307 4144 4259 16984;16985 16984 FGEVVLQPPELTARPQR 17 0 2 Unmodified _FGEVVLQPPELTARPQR_ 0 0 1 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.3646 3 646.358292 1936.05305 76286.86 0.91876 0.00059385 -0.34622 -0.00022378 0.57254 0.00037006 646.692501368178 653.030445772668 93.717 0.68793 93.717 93.316 94.004 0 192 59 4 0 0 0 9.0713E-05 2 56824 50.053 44.393 1 0.75221 0.816 0 27358000 14694000 12664000 10877 1307 4145 4260 16986;16987 16987 FGEVVLQPPELTARPQR 17 0 2 Unmodified _FGEVVLQPPELTARPQR_ 0 0 1 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.0303 3 646.358292 1936.05305 77821.01 0.75284 0.0004866 0.41049 0.00026533 1.1633 0.00075193 646.358055394491 653.030684190265 92.705 0.67945 92.705 92.369 93.048 0 178 55 6 0 0 0 3.0186E-05 1 57463 74.12 74.12 1 0.87464 0.96321 0 21362000 13248000 8114100 10878 1307 4145 4260 16988 16988 FGEVVLQPPELTARPQR 17 0 2 Unmodified _FGEVVLQPPELTARPQR_ 0 0 1 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.692 3 646.358292 1936.05305 75178.9 0.76794 0.00049636 -0.13199 -8.5314E-05 0.63595 0.00041105 646.692559205823 653.364789284514 106.71 0.86447 106.71 106.26 107.13 0 277 53 8 0 0 0 4.9624E-05 2 60925 59.261 59.261 1 0.89793 0.76447 0 7372100 4529100 2843000 10879 1307 4145 4260 16989;16990 16989 FGEVVLQPPELTARPQR 17 0 2 Unmodified _FGEVVLQPPELTARPQR_ 0 0 1 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.0312 3 646.358292 1936.05305 76754.83 0.6785 0.00043856 -0.068594 -4.4337E-05 0.60991 0.00039422 646.358227155225 653.030538730273 106.41 0.83004 106.41 106.03 106.86 0 260 51 7 0 0 0 0.00087806 2 59853 37.583 37.583 1 0.81213 0.7363 0 5415200 2454000 2961100 10880 1307 4145 4260 16991;16992 16991 FGEYNSNMSPEEK 13 1 0 Oxidation (M) _FGEYNSNM(ox)SPEEK_ FGEYNSNM(1)SPEEK FGEYNSNM(41.28)SPEEK 0 1 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.3264 2 774.31957 1546.62459 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.898 1 27.898 27.398 28.398 0 0 0 0 0.023541 1 13142 41.283 35.56 1 10881 790 4146 4261 16993 16993 630 FGFAESIANQR 11 0 1 Unmodified _FGFAESIANQR_ 0 0 0 B4DXG8;A5PLM5;Q06265;D6RIY6 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.3131 2 620.309469 1238.60439 NaN NaN NaN -0.72193 -0.00044782 NaN NaN NaN NaN 74.224 1.1225 74.224 73.664 74.786 0 0 0 0 0.00026065 1 43498 91.867 68.795 1 NaN NaN 0 8294200 0 8294200 10882 675 4147 4262 16994 16994 FGFELVK 7 1 0 Unmodified _FGFELVK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97;B3KPQ2 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 424.2435 2 420.236722 838.45889 93743.91 0.6829 0.00028698 0.063674 2.6758E-05 0.74658 0.00031374 420.236584015862 424.243763354329 90.743 1.172 90.743 90.262 91.434 0 265 97 4 0 0 0 0.037563 2 54650 60.788 51.547 1 1.3504 1.4611 0 35947000 15464000 20483000 10883 907 4148 4263 16995;16996 16995 FGFELVK 7 1 0 Unmodified _FGFELVK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97;B3KPQ2 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 420.2365 2 420.236722 838.45889 95545.18 0.15686 6.5918E-05 -0.13497 -5.6721E-05 0.021885 9.197E-06 420.2364161751 424.243784675722 89.487 1.1103 89.487 89.155 90.265 0 258 93 5 0 0 0 0.037563 2 55098 60.788 49.226 1 1.3149 1.3432 0 25800000 11522000 14278000 10884 907 4148 4263 16997;16998 16997 FGFGFGGTGK 10 1 0 Unmodified _FGFGFGGTGK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.7473 2 487.74016 973.465767 86865.11 0.41175 0.00020083 -1.4159 -0.00069061 -1.0042 -0.00048978 487.740153730762 491.747176221893 80.461 0.78709 80.461 80.07 80.857 0 347 66 7 0 0 0 1.2187E-06 2 47870 111.82 53.104 1 1.1934 1.2868 0 34168000 16360000 17808000 10885 452 4149 4264 16999;17000 17000 FGFGFGGTGK 10 1 0 Unmodified _FGFGFGGTGK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.7399 2 487.74016 973.465767 87742.86 0.42542 0.0002075 -1.4208 -0.00069297 -0.99536 -0.00048548 487.740116274783 491.747210663899 79.254 0.83121 79.254 78.898 79.729 0 323 69 7 0 0 0 0.00063908 2 48085 83.623 38.931 1 1.2133 1.2811 0 35463000 15236000 20227000 10886 452 4149 4264 17001;17002 17002 FGFGFGGTGK 10 1 0 Unmodified _FGFGFGGTGK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.7475 2 487.74016 973.465767 87791.81 0.23141 0.00011287 -0.58623 -0.00028593 -0.35482 -0.00017306 487.740023810633 491.74718740967 91.195 0.74272 91.195 90.865 91.607 0 184 51 6 0 0 0 0.013553 1 49802 49.418 18.731 1 1.3895 1.1282 0 2866900 1366400 1500600 10887 452 4149 4264 17003 17003 FGFPEGSVELYAEK 14 1 0 Unmodified _FGFPEGSVELYAEK_ 0 0 0 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.8823 2 786.882664 1571.75077 67656.5 0.81775 0.00064347 -0.0038742 -3.0485E-06 0.81388 0.00064043 786.882644228724 790.88967978896 104.51 1.1974 104.51 104.04 105.24 0 686 98 11 0 0 0 5.0992E-05 3 64368 109.6 89.94 1 1.0696 1.255 0 302020000 150080000 151940000 10888 1511 4150 4265 17004;17005;17006 17005 FGFPEGSVELYAEK 14 1 0 Unmodified _FGFPEGSVELYAEK_ 0 0 0 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.8825 2 786.882664 1571.75077 68207.05 0.48507 0.00038169 0.14123 0.00011113 0.6263 0.00049283 786.882788063819 790.889840819362 103.77 1.0922 103.77 103.37 104.46 0 659 91 10 0 0 0 3.9303E-05 3 65500 118.9 96.372 1 1.0874 1.2793 0 376770000 180460000 196310000 10889 1511 4150 4265 17007;17008;17009 17008 FGFPEGSVELYAEK 14 1 0 Unmodified _FGFPEGSVELYAEK_ 0 0 0 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.3912 2 786.882664 1571.75077 67524.14 0.81056 0.00063782 -0.078039 -6.1407E-05 0.73252 0.00057641 786.882587061433 790.889600634723 116.04 0.83949 116.04 115.8 116.64 0 197 35 11 0 0 0 0.00013229 2 68044 95.401 81.738 1 1.0559 0.87693 0 46127000 21905000 24222000 10890 1511 4150 4265 17010;17011 17010 FGFPEGSVELYAEK 14 1 0 Unmodified _FGFPEGSVELYAEK_ 0 0 0 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 790.8912 2 786.882664 1571.75077 67891.19 0.92582 0.00072851 -0.32908 -0.00025895 0.59674 0.00046957 786.882607414149 790.889634663416 115.91 0.86993 115.91 115.64 116.51 0 283 41 13 0 0 0 0.001478 2 66958 66.267 61.361 1 1.0637 0.88972 0 44673000 20286000 24387000 10891 1511 4150 4265 17012;17013 17012 FGFVDAQK 8 1 0 Unmodified _FGFVDAQK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.2338 2 456.23471 910.454868 NaN NaN NaN -0.85948 -0.00039212 NaN NaN NaN NaN 54.481 0.42961 54.481 54.144 54.573 0 0 0 0 0.047133 1 30446 57.177 45.616 1 NaN NaN 0 4536700 4536700 0 10892 1854 4151 4266 17014 17014 FGFYEVFK 8 1 0 Unmodified _FGFYEVFK_ 0 0 0 F8VVM2;Q8NCF7;Q53HC3;B2RE88;A0A024RBE8;A0A024RBH9;Q00325;F8VZL5;F8VWR4;F8VWQ0 F8VVM2 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.768 2 518.760561 1035.50657 86889.66 0.66554 0.00034526 -0.28278 -0.00014669 0.38277 0.00019856 518.760385692187 522.767433665521 106.6 0.59747 106.6 106.25 106.85 0 141 44 4 0 0 0 0.027047 1 67786 54.157 48.409 1 1.5709 1.6242 0 11400000 3728200 7671400 10893 335 4152 4267 17015 17015 FGGALDAAAK 10 1 0 Unmodified _FGGALDAAAK_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;Q8N9C4 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.7531 2 460.745442 919.476331 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.561 1 39.561 39.061 40.061 0 0 0 0 0.000773 1 20984 69.716 39.104 1 10894 89 4153 4268 17016 17016 FGGEHVPNSPFQVTALAGDQPSVQPPLR 28 0 1 Unmodified _FGGEHVPNSPFQVTALAGDQPSVQPPLR_ 0 0 0 P21333;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;H0Y5F3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 986.506 3 982.501661 2944.48315 65327.63 0.54963 0.00054001 0.38754 0.00038076 0.93717 0.00092077 982.836441900944 986.172655526427 110.97 0.45248 110.97 110.74 111.19 0 134 29 8 0 0 0 4.943E-16 2 69741 66.012 66.012 1 1.2332 1.2735 0 23880000 10930000 12950000 10895 1504 4154 4269 17017;17018 17017 FGGEHVPNSPFQVTALAGDQPSVQPPLR 28 0 1 Unmodified _FGGEHVPNSPFQVTALAGDQPSVQPPLR_ 0 0 0 P21333;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;H0Y5F3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 986.1746 3 982.501661 2944.48315 64058.98 0.2582 0.00025369 0.64368 0.00063242 0.90189 0.00088611 982.836944106773 986.17292446901 110.22 0.46401 110.22 110 110.47 0 174 29 8 0 0 0 1.9296E-10 4 70878 50.294 50.294 1 1.2762 1.356 0 24121000 8734700 15386000 10896 1504 4154 4269 17019;17020;17021;17022 17021 FGGEHVPNSPFQVTALAGDQPSVQPPLR 28 0 1 Unmodified _FGGEHVPNSPFQVTALAGDQPSVQPPLR_ 0 0 0 P21333;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;H0Y5F3 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 986.1734 3 982.501661 2944.48315 NaN NaN NaN 0.058502 5.7479E-05 NaN NaN NaN NaN 121.52 0.446 121.52 121.28 121.73 0 0 0 0 1.6999E-06 2 72334 45.125 38.094 1 NaN NaN 0 9028500 0 9028500 10897 1504 4154 4269 17023;17024 17023 FGGEHVPNSPFQVTALAGDQPSVQPPLR 28 0 1 Unmodified _FGGEHVPNSPFQVTALAGDQPSVQPPLR_ 0 0 0 P21333;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;H0Y5F3 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 986.1737 3 982.501661 2944.48315 NaN NaN NaN -0.044296 -4.3521E-05 NaN NaN NaN NaN 121.28 0.45018 121.28 121.08 121.53 0 0 0 0 0.00043629 1 71317 39.153 32.121 1 NaN NaN 0 9445500 0 9445500 10898 1504 4154 4269 17025 17025 FGGGNPELLTQMVSK 15 1 0 Oxidation (M) _FGGGNPELLTQM(ox)VSK_ FGGGNPELLTQM(1)VSK FGGGNPELLTQM(43.63)VSK 0 1 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.3995 2 797.400698 1592.78684 67822.24 0.60228 0.00048026 -0.30369 -0.00024216 0.29859 0.00023809 797.400376425011 801.406073104031 77.175 0.71412 77.175 76.908 77.622 0 172 60 6 0 0 0 0.0014007 1 45510 43.628 37.525 1 1.7599 1.8296 0 11485000 4121800 7363100 10899 1228 4155 4270 17026 17026 941 FGGGNPELLTQMVSK 15 1 0 Oxidation (M) _FGGGNPELLTQM(ox)VSK_ FGGGNPELLTQM(1)VSK FGGGNPELLTQM(65.4)VSK 0 1 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.9053 2 797.400698 1592.78684 NaN NaN NaN -0.21753 -0.00017346 NaN NaN NaN NaN 76.161 0.24277 76.161 76.027 76.27 7.6294E-06 0 0 0 0.00048946 1 45934 65.395 55.963 1 NaN NaN 0 4710900 4710900 0 10900 1228 4155 4270 17027 17027 941 FGGLAAGEDNGQR 13 0 1 Unmodified _FGGLAAGEDNGQR_ 0 0 0 A0A1B0GWA2;B7Z3Q4;O00116;Q53SN7 A0A1B0GWA2 A0A1B0GWA2 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.3043 2 646.304915 1290.59528 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.521 1 36.521 36.021 37.021 0 0 0 0 0.026695 1 18472 44.425 27.587 1 10901 635 4156 4271 17028 17028 FGGNPGGFGNQGGFGNSR 18 0 1 Unmodified _FGGNPGGFGNQGGFGNSR_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.3915 2 863.887666 1725.76078 66420.97 0.45578 0.00039374 -0.52589 -0.00045431 -0.070115 -6.0571E-05 864.388710453303 868.891656084745 62.183 0.63892 62.183 61.958 62.597 -3.8147E-06 279 55 7 0 0 0 2.3443E-16 3 35570 115.8 114.76 1 1.3978 1.4299 0 34442000 15158000 19284000 10902 153 4157 4272 17029;17030;17031 17031 FGGNPGGFGNQGGFGNSR 18 0 1 Unmodified _FGGNPGGFGNQGGFGNSR_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 864.3906 2 863.887666 1725.76078 66053.46 0.64396 0.00055631 -0.3812 -0.00032931 0.26277 0.000227 864.389028147541 868.891630067658 61.306 0.7891 61.306 60.904 61.693 0 350 75 7 0 0 0 8.3591E-12 2 35754 106.32 100.6 1 1.4075 1.5817 0 45931000 18158000 27774000 10903 153 4157 4272 17032;17033 17032 FGGNPGGFGNQGGFGNSR 18 0 1 Unmodified _FGGNPGGFGNQGGFGNSR_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.8915 2 863.887666 1725.76078 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.854 1 60.854 60.354 61.354 0 0 0 0 0.04056 1 35649 38.189 26.976 1 10904 153 4157 4272 17034 17034 FGGNPGGFGNQGGFGNSR 18 0 1 Unmodified _FGGNPGGFGNQGGFGNSR_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 868.8927 2 863.887666 1725.76078 66591.77 0.30897 0.00026692 0.022421 1.9369E-05 0.33139 0.00028629 863.887103008268 868.892270586757 71.929 0.65408 71.929 71.61 72.264 0 205 50 6 0 0 0 0.010379 1 37854 29.013 28.353 1 1.1269 0.96186 0 5676800 2588900 3087900 10905 153 4157 4272 17035 17035 FGGNPGGFGNQGGFGNSR 18 0 1 Unmodified _FGGNPGGFGNQGGFGNSR_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 863.8867 2 863.887666 1725.76078 65251.15 0.12853 0.00011104 0.19839 0.00017138 0.32692 0.00028242 863.887450293207 868.892148304541 72.507 0.6188 72.507 72.199 72.818 0 243 54 7 0 0 0 3.2372E-06 1 37394 85.081 85.081 1 1.0981 0.91499 0 6343100 3158400 3184800 10906 153 4157 4272 17036 17036 FGGSGSQVDSAR 12 0 1 Unmodified _FGGSGSQVDSAR_ 0 0 0 Q59EG8;Q13200;B4DM22;Q9NSM5 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.2779 2 584.273084 1166.53161 77722.17 0.27787 0.00016235 -0.53133 -0.00031044 -0.25346 -0.00014809 584.273325638173 589.276328068946 22.705 0.45668 22.705 22.413 22.869 0 51 18 6 0 0 0 0.011193 1 7417 45.879 30.728 1 1.8694 1.6417 0 1795300 605270 1190000 10907 1707 4158 4273 17037 17037 FGILIGR 7 0 1 Unmodified _FGILIGR_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8;E7EV54;B4DEX7 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 388.2449 2 388.244881 774.475209 101376 0.1704 6.6155E-05 -0.32756 -0.00012717 -0.15716 -6.1018E-05 388.244759455707 393.24869336313 85.97 0.61066 85.97 85.724 86.335 0 135 50 4 0 0 0 0.02665 1 51721 75.131 18.058 1 1.0708 1.0815 0 7730900 3633400 4097500 10908 746 4159 4274 17038 17038 FGLALAVAGGVVNSALYNVDAGHR 24 0 1 Unmodified _FGLALAVAGGVVNSALYNVDAGHR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.7607 3 791.088752 2370.24443 68535.41 0.91121 0.00072085 -0.64557 -0.00051071 0.26564 0.00021014 791.422139111318 794.758975835096 132.6 0.65512 132.6 132.32 132.97 0 206 38 9 0 0 0 6.7545E-14 1 86569 85.805 85.805 1 1.4483 1.4711 0 15019000 6009000 9010000 10909 730 4160 4275 17039 17039 FGLALAVAGGVVNSALYNVDAGHR 24 0 1 Unmodified _FGLALAVAGGVVNSALYNVDAGHR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.4255 3 791.088752 2370.24443 66926.45 1.089 0.00086147 -0.68642 -0.00054302 0.40254 0.00031845 791.08734941544 794.424571867723 145.27 0.16751 145.27 145.26 145.43 0 15 4 7 0 0 0 0.031547 1 91350 14.584 14.584 1 1.2863 1.3159 0 34294000 13792000 20502000 10910 730 4160 4275 17040 17040 FGLALAVAGGVVNSALYNVDAGHR 24 0 1 Unmodified _FGLALAVAGGVVNSALYNVDAGHR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.4241 3 791.088752 2370.24443 67867.02 1.0684 0.00084523 -0.27816 -0.00022005 0.79028 0.00062518 791.42232457622 794.758992596397 132.57 0.72189 132.57 132.23 132.95 0 236 41 8 0 0 0 1.3723E-27 1 88783 116.94 116.94 1 1.339 1.4545 0 28305000 10914000 17391000 10911 730 4160 4275 17041 17041 FGLALAVAGGVVNSALYNVDAGHR 24 0 1 Unmodified _FGLALAVAGGVVNSALYNVDAGHR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.4257 3 791.088752 2370.24443 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.39 1 124.39 123.89 124.89 7.6294E-06 0 0 0 1.52E-09 1 82740 71.651 63.363 1 10912 730 4160 4275 17042 17042 FGLISSTAYAQEIQK 15 1 0 Unmodified _FGLISSTAYAQEIQK_ 0 0 0 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.4422 2 828.435595 1654.85664 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.94 1 95.94 95.44 96.44 0 0 0 0 0.0058461 1 58415 52.391 46.667 1 10913 103 4161 4276 17043 17043 FGLISSTAYAQEIQK 15 1 0 Unmodified _FGLISSTAYAQEIQK_ 0 0 0 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 832.9438 2 828.435595 1654.85664 69795.61 0.82892 0.00068671 -0.0861 -7.1328E-05 0.74282 0.00061538 828.937622301541 832.442284553833 109.11 0.33579 109.11 108.99 109.33 0 70 17 5 0 0 0 0.010331 2 62812 34.96 25.273 1 1.2392 1.0047 0 2731900 1465300 1266500 10914 103 4161 4276 17044;17045 17045 FGLISSTAYAQEIQK 15 1 0 Unmodified _FGLISSTAYAQEIQK_ 0 0 0 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.4436 2 828.435595 1654.85664 67527.65 0.78581 0.000651 -0.091654 -7.5929E-05 0.69416 0.00057507 828.43620775578 832.442112280157 109.03 0.44139 109.03 108.85 109.29 0 62 19 5 0 0 0 0.00097261 2 61797 49.081 42.421 1 1.1311 0.91903 0 2935400 1468200 1467200 10915 103 4161 4276 17046;17047 17047 FGLLDQDLSNIGPAYDNQK 19 1 0 Unmodified _FGLLDQDLSNIGPAYDNQK_ 0 0 0 A8K6T5;Q9UBL3;F5H8F7;B4DPT1 A8K6T5 A8K6T5 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1054.5205 2 1054.51838 2107.0222 60363.16 0.76452 0.0008062 -0.20284 -0.00021389 0.56169 0.00059231 1055.02032452192 1059.02670738231 113.48 0.39855 113.48 113.31 113.71 -7.6294E-06 111 29 5 0 0 0 0.00028629 3 71798 44.457 44.457 1 0.81785 0.84785 0 12608000 4801900 7805600 10916 763 4162 4277 17048;17049;17050 17049 FGLLDQDLSNIGPAYDNQK 19 1 0 Unmodified _FGLLDQDLSNIGPAYDNQK_ 0 0 0 A8K6T5;Q9UBL3;F5H8F7;B4DPT1 A8K6T5 A8K6T5 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1054.5198 2 1054.51838 2107.0222 60084.25 0.66983 0.00070635 -0.48637 -0.00051289 0.18347 0.00019347 1055.0204785484 1059.02585720334 113.05 0.39443 113.05 112.81 113.21 0 97 25 5 0 0 0 1.5948E-05 2 73325 66.285 66.285 1 0.81248 0.84852 0 10937000 5321200 5615900 10917 763 4162 4277 17051;17052 17052 FGLSAAEDITPR 12 0 1 Unmodified _FGLSAAEDITPR_ 0 0 0 Q9BUH6 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8303 2 638.830234 1275.64592 NaN NaN NaN -0.05528 -3.5314E-05 NaN NaN NaN NaN 85.966 0.48352 85.966 85.748 86.231 0 0 0 0 0.0023198 2 51671 82.417 63.977 1 NaN NaN 0 5432100 5432100 0 10918 2005 4163 4278 17053;17054 17053 FGLSAAEDITPR 12 0 1 Unmodified _FGLSAAEDITPR_ 0 0 0 Q9BUH6 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.8308 2 638.830234 1275.64592 NaN NaN NaN -0.5743 -0.00036688 NaN NaN NaN NaN 84.923 0.50665 84.923 84.84 85.347 0 0 0 0 0.0020087 1 52231 84.658 73.065 1 NaN NaN 0 5656900 5656900 0 10919 2005 4163 4278 17055 17055 FGNEVIPVTVTVK 13 1 0 Unmodified _FGNEVIPVTVTVK_ 0 0 0 A0A140VJX1;P24752 A0A140VJX1 A0A140VJX1 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.9077 2 701.90066 1401.78677 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.772 1 99.772 99.272 100.27 7.6294E-06 0 0 0 0.024082 1 61119 44.847 25.06 1 10920 611 4164 4279 17056 17056 FGNICVVR 8 0 1 Unmodified _FGNICVVR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.759 2 482.755287 963.496021 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.873 1 60.873 60.373 61.373 0 0 0 0 0.029494 1 34753 63.148 40.128 1 10921 764 4165 4280 17057 17057 FGNICVVR 8 0 1 Unmodified _FGNICVVR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.7589 2 482.755287 963.496021 NaN NaN NaN -1.0405 -0.00050229 NaN NaN NaN NaN 59.539 0.33092 59.539 59.423 59.754 0 0 0 0 0.012442 1 34679 73.637 58.416 1 NaN NaN 0 11105000 0 11105000 10922 764 4165 4280 17058 17058 FGNQEDAHEFLR 12 0 1 Unmodified _FGNQEDAHEFLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7ELR5;Q8IXW9 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.8992 3 488.228507 1461.66369 85996.38 0.36852 0.00017992 0.54071 0.00026399 0.90923 0.00044391 488.228736305126 491.564786446673 51.563 0.59188 51.563 51.279 51.871 0 224 53 8 0 0 0 0.0047961 1 28584 42.789 34.878 1 1.3359 1.3806 0 23666000 9338200 14328000 10923 260 4166 4281 17059 17059 FGNQEDAHEFLR 12 0 1 Unmodified _FGNQEDAHEFLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7ELR5;Q8IXW9 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.8448 2 731.839122 1461.66369 NaN NaN NaN 1.209 0.00088482 NaN NaN NaN NaN 51.58 0.36971 51.58 51.403 51.773 -3.8147E-06 0 0 0 0.054459 1 28483 41.283 24.651 1 NaN NaN 0 6041500 0 6041500 10924 260 4166 4281 17060 17060 FGNQEDAHEFLR 12 0 1 Unmodified _FGNQEDAHEFLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7ELR5;Q8IXW9 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.3414 2 731.839122 1461.66369 NaN NaN NaN -0.53066 -0.00038836 NaN NaN NaN NaN 49.91 0.1122 49.91 49.863 49.975 0 0 0 0 0.0022726 1 28127 68.536 58.304 1 NaN NaN 0 6245300 6245300 0 10925 260 4166 4281 17061 17061 FGNQEDAHEFLR 12 0 1 Unmodified _FGNQEDAHEFLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7ELR5;Q8IXW9 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 491.5645 3 488.228507 1461.66369 88002.27 0.090054 4.3967E-05 -0.076522 -3.736E-05 0.013533 6.607E-06 488.228361024103 491.564430520903 58.984 0.6887 58.984 58.775 59.464 3.8147E-06 257 54 7 0 0 0 0.0086395 1 30074 36.236 21.205 1 1.6733 1.3989 0 3583000 1396900 2186100 10926 260 4166 4281 17062 17062 FGNQEDAHEFLR 12 0 1 Unmodified _FGNQEDAHEFLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7ELR5;Q8IXW9 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.5646 3 488.228507 1461.66369 86941.9 0.18571 9.0669E-05 -0.14444 -7.0522E-05 0.041265 2.0147E-05 488.2283244343 491.564491361026 59.405 0.84494 59.405 59.153 59.998 3.8147E-06 257 64 6 0 0 0 0.005852 1 29623 40.373 30.047 1 1.5399 1.31 0 3147500 1072100 2075400 10927 260 4166 4281 17063 17063 FGNVYLAR 8 0 1 Unmodified _FGNVYLAR_ 0 0 0 B2RC06;J3KT86;A0A0A0MSY3;V9HW16;Q5Y191;Q9UQB9;B4DXA6;Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRJ2;O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4;A3KFJ1 B2RC06;Q96GD4;O14965 Q96GD4 AURKB;AURKC;HEL-S-90;AURKA Aurora kinase C;Aurora kinase B;Aurora kinase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.2562 2 470.255977 938.497401 87909.16 0.18204 8.5603E-05 0.22284 0.00010479 0.40488 0.0001904 470.255903948381 475.260231899809 58.869 1.4705 58.869 58.116 59.587 3.8147E-06 516 117 8 0 0 0 0.0027401 3 33286 110.61 79.322 1 1.1437 1.331 0 185310000 90336000 94973000 10928 881;1967;1369 4167 4282 17064;17065;17066 17066 FGNVYLAR 8 0 1 Unmodified _FGNVYLAR_ 0 0 0 B2RC06;J3KT86;A0A0A0MSY3;V9HW16;Q5Y191;Q9UQB9;B4DXA6;Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRJ2;O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4;A3KFJ1 B2RC06;Q96GD4;O14965 Q96GD4 AURKB;AURKC;HEL-S-90;AURKA Aurora kinase C;Aurora kinase B;Aurora kinase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.2558 2 470.255977 938.497401 87584.67 0.23158 0.0001089 -0.018352 -8.6303E-06 0.21323 0.00010027 470.255908244778 475.260113010334 57.738 0.87447 57.738 57.454 58.329 0 405 69 8 0 0 0 0.00076218 2 33534 141.98 110.69 1 1.0442 1.2024 0 217040000 105290000 111750000 10929 881;1967;1369 4167 4282 17067;17068 17068 FGNVYLAR 8 0 1 Unmodified _FGNVYLAR_ 0 0 0 B2RC06;J3KT86;A0A0A0MSY3;V9HW16;Q5Y191;Q9UQB9;B4DXA6;Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRJ2;O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4;A3KFJ1 B2RC06;Q96GD4;O14965 Q96GD4 AURKB;AURKC;HEL-S-90;AURKA Aurora kinase C;Aurora kinase B;Aurora kinase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.2607 2 470.255977 938.497401 87565.87 0.19507 9.1731E-05 0.11658 5.4821E-05 0.31164 0.00014655 470.255902607397 475.260081904069 68.071 1.3523 68.071 67.484 68.836 0 495 95 8 0 0 0 0.01271 2 35319 66.993 49.226 1 1.9566 1.6579 0 31925000 11782000 20143000 10930 881;1967;1369 4167 4282 17069;17070 17069 FGNVYLAR 8 0 1 Unmodified _FGNVYLAR_ 0 0 0 B2RC06;J3KT86;A0A0A0MSY3;V9HW16;Q5Y191;Q9UQB9;B4DXA6;Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRJ2;O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4;A3KFJ1 B2RC06;Q96GD4;O14965 Q96GD4 AURKB;AURKC;HEL-S-90;AURKA Aurora kinase C;Aurora kinase B;Aurora kinase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.2601 2 470.255977 938.497401 87834.65 0.21971 0.00010332 0.042682 2.0072E-05 0.26239 0.00012339 470.255908223411 475.260047164715 68.426 1.7883 68.426 67.875 69.664 0 531 127 8 0 0 0 0.0052735 1 35186 90.986 67.462 1 1.9598 1.7095 0 27802000 8992400 18810000 10931 881;1967;1369 4167 4282 17071 17071 FGPALSVK 8 1 0 Unmodified _FGPALSVK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;A0A024R9E2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YAP2;H0YBN4 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.7495 2 409.742171 817.469789 95303.77 0.56163 0.00023012 -0.056637 -2.3207E-05 0.50499 0.00020692 409.742157475727 413.749080973749 60.339 0.50857 60.339 60.098 60.606 0 159 45 5 0 0 0 0.039273 2 34406 47.657 5.2612 1 1.871 2.0176 0 37527000 12887000 24640000 10932 273 4168 4283 17072;17073 17072 FGPALSVK 8 1 0 Unmodified _FGPALSVK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;A0A024R9E2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YAP2;H0YBN4 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 409.7421 2 409.742171 817.469789 95820.36 0.30759 0.00012603 0.10195 4.1773E-05 0.40954 0.00016781 409.742206583872 413.749156735812 59.097 0.43625 59.097 58.871 59.307 0 150 40 6 0 0 0 0.02421 2 34369 56.014 5.2612 1 1.9343 2.1409 0 45561000 15563000 29999000 10933 273 4168 4283 17074;17075 17075 FGPYESYDSR 10 0 1 Unmodified _FGPYESYDSR_ 0 0 0 Q5BKZ1 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.7687 2 610.76456 1219.51457 79045.45 0.41281 0.00025213 0.053818 3.287E-05 0.46662 0.000285 610.764610177143 615.768656207453 47.048 0.53276 47.048 46.674 47.206 0 167 47 4 0 0 0 0.0010831 1 26032 76.465 71.263 1 1.4693 1.5812 0 25751000 11178000 14573000 10934 1804 4169 4284 17076 17076 FGQGGAGPVGGQGPR 15 0 1 Unmodified _FGQGGAGPVGGQGPR_ 0 0 0 Q9BSV4;Q86VG2;P23246 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 676.3407 2 671.33655 1340.65855 NaN NaN NaN -0.26451 -0.00017758 NaN NaN NaN NaN 31.433 0.53264 31.433 31.134 31.666 0 0 0 0 0.00039037 1 15508 73.781 61.541 1 NaN NaN 0 18728000 0 18728000 10935 1510 4170 4285 17077 17077 FGQLTYVR 8 0 1 Unmodified _FGQLTYVR_ 0 0 0 C9IZ01;E5KND7;E5KND5;Q96RP9;D3DNL3;F8WAU4 C9IZ01 C9IZ01 GFM1 Elongation factor G, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.2736 2 492.269084 982.523616 NaN NaN NaN 0.83696 0.00041201 NaN NaN NaN NaN 60.543 0.38217 60.543 60.389 60.771 3.8147E-06 0 0 0 0.045615 1 34545 51.662 15.791 1 NaN NaN 0 3921000 0 3921000 10936 1126 4171 4286 17078 17078 FGQLTYVR 8 0 1 Unmodified _FGQLTYVR_ 0 0 0 C9IZ01;E5KND7;E5KND5;Q96RP9;D3DNL3;F8WAU4 C9IZ01 C9IZ01 GFM1 Elongation factor G, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.7744 2 492.269084 982.523616 NaN NaN NaN 1.0105 0.00049741 NaN NaN NaN NaN 59.237 0.37267 59.237 59.095 59.468 0 0 0 0 0.020252 1 34463 65.235 34.598 1 NaN NaN 0 6002100 0 6002100 10937 1126 4171 4286 17079 17079 FGQVGLCDLTQQPK 14 1 0 Unmodified _FGQVGLCDLTQQPK_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.4032 2 795.900865 1589.78718 67605.11 0.81063 0.00064518 -1.1803 -0.00093938 -0.36965 -0.0002942 796.401038333685 799.907679476544 86.259 0.59707 86.259 85.896 86.494 7.6294E-06 116 48 5 0 0 0 0.00884 1 51871 38.021 38.021 1 0.3873 0.38513 0 9596000 6463800 3132200 10938 508 4172 4287 17080 17080 FGQVGLCDLTQQPK 14 1 0 Unmodified _FGQVGLCDLTQQPK_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.9012 2 795.900865 1589.78718 68213.06 0.69749 0.00055513 -0.72855 -0.00057985 -0.031063 -2.4723E-05 795.899584819485 799.90823864577 98.851 0.7298 98.851 98.332 99.061 -7.6294E-06 170 45 6 0 0 0 0.0092506 1 55760 37.327 37.327 1 1.0779 0.85486 0 4410800 1914800 2496000 10939 508 4172 4287 17081 17081 FGQVGLCDLTQQPK 14 1 0 Unmodified _FGQVGLCDLTQQPK_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 795.9003 2 795.900865 1589.78718 68346.49 0.70549 0.0005615 -0.59591 -0.00047428 0.10958 8.7216E-05 795.899682944042 799.908167190776 98.701 0.85785 98.701 98.158 99.016 0 175 51 8 0 0 0 0.0012966 2 54872 54.7 54.7 1 1.1711 0.96127 0 5255300 2084700 3170600 10940 508 4172 4287 17082;17083 17083 FGSEFSPELQASFQK 15 1 0 Unmodified _FGSEFSPELQASFQK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 851.4113 2 851.409577 1700.8046 NaN NaN NaN 0.027859 2.3719E-05 NaN NaN NaN NaN 96.052 1.5003 96.052 95.263 96.763 0 0 0 0 1.0073E-42 2 58305 158.02 139.27 1 NaN NaN 0 119120000 119120000 0 + 10941 1172 4173 4288 17084;17085 17084 FGSEFSPELQASFQK 15 1 0 Unmodified _FGSEFSPELQASFQK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 851.41 2 851.409577 1700.8046 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.999 1 94.999 94.499 95.499 0 0 0 0 0.0014788 1 59110 65.179 52.603 1 + 10942 1172 4173 4288 17086 17086 FGSEFSPELQASFQK 15 1 0 Unmodified _FGSEFSPELQASFQK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 851.4108 2 851.409577 1700.8046 NaN NaN NaN 0.071956 6.1264E-05 NaN NaN NaN NaN 109.14 1.0201 109.14 108.9 109.92 7.6294E-06 0 0 0 0.0507 1 63064 36.679 30.677 1 NaN NaN 0 38234000 38234000 0 + 10943 1172 4173 4288 17087 17087 FGTEELFK 8 1 0 Unmodified _FGTEELFK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;B3KRD4;Q12873;B4DLC6 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.7474 2 485.74765 969.480748 87250.96 0.11092 5.3877E-05 0.1877 9.1173E-05 0.29861 0.00014505 485.747522192258 489.75493439766 78.257 1.0862 78.257 77.663 78.75 0 425 90 8 0 0 0 0.001025 1 46311 114.78 90.584 1 0.72187 0.81691 0 101720000 56385000 45334000 10944 515;1701 4174 4289 17088 17088 FGTEELFK 8 1 0 Unmodified _FGTEELFK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;B3KRD4;Q12873;B4DLC6 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.7549 2 485.74765 969.480748 86472.68 0.19517 9.4803E-05 -0.20398 -9.9084E-05 -0.0088145 -4.2816E-06 485.747249618604 489.754764305949 77.079 1.3215 77.079 76.556 77.878 0 449 105 8 0 0 0 0.0056635 2 46602 89.752 58.327 1 0.787 0.87972 0 101160000 60484000 40676000 10945 515;1701 4174 4289 17089;17090 17090 FGTEELFK 8 1 0 Unmodified _FGTEELFK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;B3KRD4;Q12873;B4DLC6 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.7547 2 485.74765 969.480748 86878.48 0.461 0.00022393 0.47757 0.00023198 0.93856 0.0004559 485.747561661169 489.754985914942 88.905 1.4821 88.905 88.457 89.939 -7.6294E-06 350 95 8 0 0 0 0.013109 2 48940 66.073 53.085 1 1.7602 1.4048 0 9349500 3360100 5989400 10946 515;1701 4174 4289 17091;17092 17091 FGTEELFK 8 1 0 Unmodified _FGTEELFK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;B3KRD4;Q12873;B4DLC6 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.7548 2 485.74765 969.480748 86494.18 0.094479 4.5893E-05 0.62547 0.00030382 0.71995 0.00034971 485.747537233613 489.755087792282 88.929 0.91528 88.929 88.5 89.415 7.6294E-06 269 58 8 0 0 0 0.0057275 1 48125 89.55 65.578 1 1.8562 1.5203 0 8609300 2815500 5793800 10947 515;1701 4174 4289 17093 17093 FGTEELFKDEATDGGGDNK 19 2 0 Unmodified _FGTEELFKDEATDGGGDNK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.9818 3 677.304358 2028.89124 73563.09 0.46047 0.00031188 0.040924 2.7718E-05 0.5014 0.0003396 677.304037745595 682.981525731562 79.843 0.65194 79.843 79.611 80.262 -7.6294E-06 227 39 8 0 0 0 0.00011245 1 43043 45.347 45.347 1 2.1743 1.8603 0 10293000 3231800 7061100 10948 515 4175 4290 17094 17094 FGTEELFKDEATDGGGDNK 19 2 0 Unmodified _FGTEELFKDEATDGGGDNK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.6474 3 677.304358 2028.89124 73744.95 0.51099 0.0003461 -0.14485 -9.8104E-05 0.36615 0.00024799 677.63862546736 682.647045796447 80.116 0.64194 80.116 79.834 80.476 0 223 36 8 0 0 0 1.851E-06 2 42383 81.807 81.807 1 2.3058 1.9583 0 5931300 2113200 3818200 10949 515 4175 4290 17095;17096 17096 FGVCEFLNCSETTLR 15 0 1 Unmodified _FGVCEFLNCSETTLR_ 0 0 0 Q3ZCW6;B3KMJ9;B3KN77;O95263 Q3ZCW6 Q3ZCW6 PDE8B High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 916.9202 2 916.918929 1831.8233 61753 0.82267 0.00075432 -0.76022 -0.00069706 0.062451 5.7262E-05 916.919154925219 921.922810881139 111.27 2.1255 111.27 110.64 112.76 7.6294E-06 1174 150 15 0 0 0 0.033485 1 70040 26.043 19.81 1 2.0066 2.388 0 1585100000 521080000 1064000000 10950 905 4176 4291 17097 17097 FGVEQPEGDEDLTK 14 1 0 Unmodified _FGVEQPEGDEDLTK_ 0 0 0 P24928;A0A087WWE2 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.3695 2 782.362293 1562.71003 NaN NaN NaN -0.63019 -0.00049303 NaN NaN NaN NaN 63.696 0.46905 63.696 63.565 64.034 -3.8147E-06 0 0 0 0.016262 1 36564 47.844 22.627 1 NaN NaN 0 5170500 0 5170500 10951 1514 4177 4292 17098 17098 FGVEQPEGDEDLTK 14 1 0 Unmodified _FGVEQPEGDEDLTK_ 0 0 0 P24928;A0A087WWE2 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.3709 2 782.362293 1562.71003 69671.7 0.48623 0.00038041 0.23334 0.00018256 0.71957 0.00056296 782.362117909484 786.369465705474 62.763 0.46671 62.763 62.49 62.957 3.8147E-06 145 41 5 0 0 0 0.00024871 1 36779 62.408 62.408 1 1.0358 1.0652 0 11657000 4925900 6731500 10952 1514 4177 4292 17099 17099 FGVFNYSPFR 10 0 1 Unmodified _FGVFNYSPFR_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q5JV90;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3064 2 617.306198 1232.59784 79809.73 0.99144 0.00061202 -0.1303 -8.0434E-05 0.86114 0.00053159 617.306045793198 622.310173430167 111.74 0.72458 111.74 111.32 112.04 7.6294E-06 210 53 5 0 0 0 0.00086964 2 70298 79.906 79.906 1 0.64504 0.67773 0 11641000 7515700 4125300 10953 422;1317 4178 4293 17100;17101 17101 FGVFNYSPFR 10 0 1 Unmodified _FGVFNYSPFR_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q5JV90;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.3074 2 617.306198 1232.59784 79823.09 0.43189 0.00026661 0.17188 0.0001061 0.60377 0.00037271 617.306264273456 622.812020845747 110.99 0.69701 110.99 110.59 111.29 0 163 51 5 0 0 0 0.0027721 3 71301 67.563 53.356 1 0.49489 0.49304 0 11703000 5775500 5927300 10954 422;1317 4178 4293 17102;17103;17104 17102 FGVFNYSPFR 10 0 1 Unmodified _FGVFNYSPFR_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q5JV90;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.3105 2 617.306198 1232.59784 80906.68 0.77005 0.00047536 0.11028 6.8076E-05 0.88033 0.00054343 617.808025491931 622.310097104536 122.51 0.42052 122.51 122.3 122.72 0 91 21 6 0 0 0 0.00084902 1 73068 80.239 71.326 1 1.8786 1.5711 0 3815600 1359800 2455800 10955 422;1317 4178 4293 17105 17105 FGVFNYSPFR 10 0 1 Unmodified _FGVFNYSPFR_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q5JV90;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.3103 2 617.306198 1232.59784 NaN NaN NaN -0.13453 -8.3049E-05 NaN NaN NaN NaN 122.22 0.47786 122.22 122.09 122.56 0 0 0 0 0.0059051 1 71955 67.563 56.733 1 NaN NaN 0 3055400 0 3055400 10956 422;1317 4178 4293 17106 17106 FGVPVIADGGIQNVGHIAK 19 1 0 Unmodified _FGVPVIADGGIQNVGHIAK_ 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.0227 3 631.351137 1891.03158 75201.58 0.42886 0.00027076 0.19299 0.00012184 0.62185 0.0003926 631.685551969543 634.022674861356 102.77 1.0689 102.77 102.28 103.35 0 551 90 10 0 0 0 5.5325E-06 2 63168 63.827 63.827 1 1.2853 1.4566 0 156010000 69988000 86024000 10957 1282 4179 4294 17107;17108 17108 FGVPVIADGGIQNVGHIAK 19 1 0 Unmodified _FGVPVIADGGIQNVGHIAK_ 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.5239 2 946.523067 1891.03158 63977.13 0.30488 0.00028858 0.27033 0.00025587 0.57521 0.00054445 947.02389533252 950.530409264982 102.77 0.42487 102.77 102.56 102.98 0 86 36 4 0 0 0 0.00015513 2 63287 47.189 47.189 1 1.2744 1.3199 0 12665000 4928600 7736200 10958 1282 4179 4294 17109;17110 17109 FGVPVIADGGIQNVGHIAK 19 1 0 Unmodified _FGVPVIADGGIQNVGHIAK_ 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3514 3 631.351137 1891.03158 74699.83 0.42207 0.00026648 -0.080511 -5.083E-05 0.34156 0.00021565 631.685429099257 634.022521592341 101.92 0.91914 101.92 101.4 102.32 0 456 71 9 0 0 0 7.89E-06 2 64130 51.495 51.495 1 1.2334 1.4408 0 279630000 132080000 147540000 10959 1282 4179 4294 17111;17112 17112 FGVPVIADGGIQNVGHIAK 19 1 0 Unmodified _FGVPVIADGGIQNVGHIAK_ 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.0231 3 631.351137 1891.03158 75180.89 0.91291 0.00057637 -0.33324 -0.00021039 0.57967 0.00036597 631.685186665349 634.356918897608 114.27 0.63887 114.27 114.05 114.69 0 117 27 7 0 0 0 0.031258 1 66656 17.021 17.021 1 1.3115 1.0638 0 25932000 10450000 15483000 10960 1282 4179 4294 17113 17113 FGVPVIADGGIQNVGHIAK 19 1 0 Unmodified _FGVPVIADGGIQNVGHIAK_ 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.6852 3 631.351137 1891.03158 76076.14 0.72343 0.00045674 -0.26473 -0.00016714 0.4587 0.0002896 631.350903574697 634.357016161752 114.08 0.63468 114.08 113.85 114.48 -7.6294E-06 124 26 7 0 0 0 0.00015298 1 65638 27.324 27.324 1 1.3193 1.0563 0 20734000 9001500 11732000 10961 1282 4179 4294 17114 17114 FGVSSSSSGPSQTLTSTGNFK 21 1 0 Unmodified _FGVSSSSSGPSQTLTSTGNFK_ 0 0 0 A0A024QZW7;P49790 A0A024QZW7 A0A024QZW7 NUP153 Nuclear pore complex protein Nup153 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1043.0061 2 1038.49764 2074.98073 NaN NaN NaN -2.8008 -0.0029086 NaN NaN NaN NaN 76.587 0.32542 76.587 76.4 76.725 0 0 0 0 0.0034825 1 45108 40.941 28.581 1 NaN NaN 0 4468200 0 4468200 10962 31 4180 4295 17115 17115 FGVSSSSSGPSQTLTSTGNFK 21 1 0 Unmodified _FGVSSSSSGPSQTLTSTGNFK_ 0 0 0 A0A024QZW7;P49790 A0A024QZW7 A0A024QZW7 NUP153 Nuclear pore complex protein Nup153 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1038.9963 2 1038.49764 2074.98073 NaN NaN NaN -1.2989 -0.0013489 NaN NaN NaN NaN 76.546 0.28075 76.546 76.432 76.713 0 0 0 0 0.012038 1 45114 36.022 31.131 1 NaN NaN 0 3749300 3749300 0 10963 31 4180 4295 17116 17116 FGVSSSSSGPSQTLTSTGNFK 21 1 0 Unmodified _FGVSSSSSGPSQTLTSTGNFK_ 0 0 0 A0A024QZW7;P49790 A0A024QZW7 A0A024QZW7 NUP153 Nuclear pore complex protein Nup153 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1038.4995 2 1038.49764 2074.98073 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.582 1 75.582 75.082 76.082 0 0 0 0 0.021909 1 45558 38.511 29.998 1 10964 31 4180 4295 17117 17117 FGVVANNNR 9 0 1 Unmodified _FGVVANNNR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.7597 2 495.759415 989.504277 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.091 1 29.091 28.591 29.591 0 0 0 0 0.020704 1 13985 56.011 38.625 1 10965 2002 4181 4296 17118 17118 FGVVLDEIKPSSAPELQAVR 20 1 1 Unmodified _FGVVLDEIKPSSAPELQAVR_ 0 0 1 M0R061;Q7Z4Z1;Q53HJ6;M0QXB4;O14579 M0R061 M0R061 COPE Coatomer subunit epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.4059 3 719.063433 2154.16847 73527.49 0.77784 0.00055932 0.068808 4.9478E-05 0.84665 0.00060879 719.06369447126 725.071119888241 105.75 0.51589 105.75 105.44 105.96 0 164 36 6 0 0 0 2.7686E-05 1 67132 46.358 46.358 1 1.5209 1.7241 0 16926000 6354500 10571000 10966 1350 4182 4297 17119 17119 FGVVLDEIKPSSAPELQAVR 20 1 1 Unmodified _FGVVLDEIKPSSAPELQAVR_ 0 0 1 M0R061;Q7Z4Z1;Q53HJ6;M0QXB4;O14579 M0R061 M0R061 COPE Coatomer subunit epsilon MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 719.3983 3 719.063433 2154.16847 71320.1 0.59714 0.00042938 -0.097831 -7.0347E-05 0.49931 0.00035904 719.398240880953 725.404511456158 117.22 0.32697 117.22 117.03 117.35 0 42 13 5 0 0 0 0.037795 1 69034 17.824 17.824 1 1.0091 0.85226 0 3141600 1595300 1546300 10967 1350 4182 4297 17120 17120 FGVVLDEIKPSSAPELQAVR 20 1 1 Unmodified _FGVVLDEIKPSSAPELQAVR_ 0 0 1 M0R061;Q7Z4Z1;Q53HJ6;M0QXB4;O14579 M0R061 M0R061 COPE Coatomer subunit epsilon MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.3979 3 719.063433 2154.16847 73014.53 0.74281 0.00053413 -0.15476 -0.00011128 0.58805 0.00042285 719.732341880365 725.404487200999 116.98 0.31353 116.98 116.79 117.1 -7.6294E-06 51 13 7 0 0 0 0.053343 1 67962 14.89 14.89 1 1.0204 0.88171 0 2179000 1121300 1057700 10968 1350 4182 4297 17121 17121 FGYQFTQQGPR 11 0 1 Unmodified _FGYQFTQQGPR_ 0 0 0 Q5HYL6;Q9NYL9;H0YKU1;H0YNJ8 Q5HYL6 Q5HYL6 DKFZp686E1899;TMOD3 Tropomodulin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.828 2 664.822744 1327.63093 75958.37 0.66378 0.0004413 0.85053 0.00056545 1.5143 0.0010067 664.823140107898 669.827166485047 74.06 0.47151 74.06 73.827 74.299 0 118 30 5 0 0 0 0.030651 1 39317 38.567 38.567 1 2.7195 2.3606 0 2174500 676290 1498200 10969 1808 4183 4298 17122 17122 FGYQFTQQGPR 11 0 1 Unmodified _FGYQFTQQGPR_ 0 0 0 Q5HYL6;Q9NYL9;H0YKU1;H0YNJ8 Q5HYL6 Q5HYL6 DKFZp686E1899;TMOD3 Tropomodulin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.8278 2 664.822744 1327.63093 73579.33 0.48381 0.00032164 0.62033 0.00041241 1.1041 0.00073405 664.823355564294 669.826999804677 74.526 0.49005 74.526 74.256 74.746 0 88 28 5 0 0 0 0.0050483 1 38789 56.916 56.916 1 2.211 1.9956 0 2088500 721840 1366600 10970 1808 4183 4298 17123 17123 FGYSVNR 7 0 1 Unmodified _FGYSVNR_ 0 0 0 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;B4E098;D6RC60;A0A087WU10 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.7165 2 421.711402 841.408252 NaN NaN NaN -0.084798 -3.576E-05 NaN NaN NaN NaN 34.383 0.43777 34.383 34.102 34.54 0 0 0 0 0.040231 1 17397 63.148 26.054 1 NaN NaN 0 25625000 0 25625000 10971 2135 4184 4299 17124 17124 FGYSVNR 7 0 1 Unmodified _FGYSVNR_ 0 0 0 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;B4E098;D6RC60;A0A087WU10 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 426.7154 2 421.711402 841.408252 92568.16 -0.46162 -0.00019467 0.44103 0.00018599 -0.020587 -8.682E-06 421.711588788388 426.715477749287 40.163 0.48029 40.163 39.926 40.406 0 164 36 6 0 0 0 0.044039 1 18457 57.811 24.296 1 0.77274 0.66069 0 8746500 4895200 3851300 10972 2135 4184 4299 17125 17125 FGYVDFESAEDLEK 14 1 0 Unmodified _FGYVDFESAEDLEK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.8732 2 824.872493 1647.73043 67094.49 0.68242 0.00056291 -0.11871 -9.7923E-05 0.56371 0.00046499 824.872515347792 828.879499879982 103.85 1.5261 103.85 103.42 104.94 0 858 124 11 0 0 0 6.8031E-21 3 63853 138.75 138.75 1 1.1059 1.2566 0 163730000 77075000 86658000 10973 151 4185 4300 17126;17127;17128 17127 FGYVDFESAEDLEK 14 1 0 Unmodified _FGYVDFESAEDLEK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.8728 2 824.872493 1647.73043 66844.59 0.83157 0.00068594 -0.099489 -8.2066E-05 0.73208 0.00060387 824.872468948697 828.879442454375 103.23 1.7843 103.23 102.3 104.09 0 819 146 10 0 0 0 4.8859E-21 2 65084 142.08 142.08 1 1.1095 1.291 0 239810000 115990000 123810000 10974 151 4185 4300 17129;17130 17129 FGYVDFESAEDLEK 14 1 0 Unmodified _FGYVDFESAEDLEK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 824.8735 2 824.872493 1647.73043 NaN NaN NaN 0.016325 1.3466E-05 NaN NaN NaN NaN 115.53 1.0947 115.53 115.21 116.31 0 0 0 0 7.2966E-16 1 67574 129.84 122.46 1 NaN NaN 0 29314000 29314000 0 10975 151 4185 4300 17131 17131 FGYVDFESAEDLEK 14 1 0 Unmodified _FGYVDFESAEDLEK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 828.8809 2 824.872493 1647.73043 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.34 1 115.34 114.84 115.84 -7.6294E-06 0 0 0 0.0012613 1 67573 74.76 49.101 1 10976 151 4185 4300 17132 17132 FGYVDFESAEDLEK 14 1 0 Unmodified _FGYVDFESAEDLEK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 824.8726 2 824.872493 1647.73043 NaN NaN NaN 0.27453 0.00022645 NaN NaN NaN NaN 115.44 1.1298 115.44 115.13 116.26 7.6294E-06 0 0 0 2.8352E-06 1 66610 99.5 92.12 1 NaN NaN 0 22173000 22173000 0 10977 151 4185 4300 17133 17133 FHEAQLSEK 9 1 0 Unmodified _FHEAQLSEK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.7798 2 544.772188 1087.52982 81707.86 0.12986 7.0744E-05 0.41924 0.00022839 0.5491 0.00029914 544.77234561404 548.779813294158 22.035 0.28545 22.035 21.893 22.179 0 70 15 6 0 0 0 6.8229E-06 2 8173 130.66 96.859 1 1.3774 1.35 0 21000000 8742600 12258000 10978 39 4186 4301 17134;17135 17134 FHEAQLSEK 9 1 0 Unmodified _FHEAQLSEK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.7795 2 544.772188 1087.52982 81663.14 0.3768 0.00020527 -0.12475 -6.7959E-05 0.25206 0.00013731 544.772130011076 548.779310472403 21.631 0.44607 21.631 21.444 21.89 0 93 21 7 0 0 0 2.1409E-05 2 7725 117.01 93.246 1 1.2189 1.2415 0 26061000 12853000 13208000 10979 39 4186 4301 17136;17137 17137 FHEAQLSEK 9 1 0 Unmodified _FHEAQLSEK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.7798 2 544.772188 1087.52982 82580.23 0.50295 0.000274 0.13907 7.5759E-05 0.64202 0.00034975 544.77212743936 548.779699183474 23.943 0.31576 23.943 23.805 24.121 0 63 18 6 0 0 0 0.013268 1 8274 56.729 39.953 1 1.4555 1.214 0 1725700 688520 1037200 10980 39 4186 4301 17138 17138 FHEQFIVR 8 0 1 Unmodified _FHEQFIVR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WY29;A0A087WWR6 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.2921 2 538.287808 1074.56106 81719.8 0.59508 0.00032032 0.12395 6.6719E-05 0.71902 0.00038704 538.287846235356 543.2917974758 51.109 0.48659 51.109 50.831 51.317 0 162 44 5 0 0 0 0.0069807 1 28195 84.916 66.93 1 1.2181 1.2559 0 36849000 18779000 18070000 10981 1689 4187 4302 17139 17139 FHEQFIVR 8 0 1 Unmodified _FHEQFIVR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WY29;A0A087WWR6 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.2919 2 538.287808 1074.56106 82417.22 0.62495 0.00033641 -0.51051 -0.0002748 0.11444 6.1603E-05 538.287497953851 543.29162293393 57.244 0.45275 57.244 57.048 57.501 3.8147E-06 97 27 6 0 0 0 0.029728 2 28337 52.403 45.953 1 1.362 1.13 0 5388600 2299900 3088800 10982 1689 4187 4302 17140;17141 17141 FHFIDIYLDELSK 13 1 0 Unmodified _FHFIDIYLDELSK_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.4224 2 820.421956 1638.82936 66527.61 0.88203 0.00072364 1.756 0.0014407 2.638 0.0021643 820.422044906261 824.429832538072 131.57 0.9702 131.57 131.34 132.31 0 155 45 7 0 0 0 0.010416 1 79896 41.704 32.975 1 1.9634 1.5575 0 4526500 1322900 3203600 10983 1740 4188 4303 17142 17142 FHFIDIYLDELSK 13 1 0 Unmodified _FHFIDIYLDELSK_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.4236 2 820.421956 1638.82936 66191.47 1.0764 0.00088314 0.51308 0.00042095 1.5895 0.0013041 820.421563398289 824.42938020774 131.32 0.48209 131.32 131.14 131.62 0 69 20 5 0 0 0 1.859E-13 1 78825 130.01 116.1 1 2.0564 1.6325 0 4014200 1229400 2784800 10984 1740 4188 4303 17143 17143 FHHTIGGSR 9 0 1 Unmodified _FHHTIGGSR_ 0 0 0 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 337.8424 3 337.842147 1010.50461 102217.6 -0.25316 -8.5527E-05 0.36481 0.00012325 0.11166 3.7722E-05 337.842232290057 341.178352857788 16.78 0.81746 16.78 16.604 17.421 0 107 26 8 0 0 0 7.8493E-06 1 3998 96.668 83.089 1 0.91986 1.0054 0 52350000 26844000 25506000 10985 121 4189 4304 17144 17144 FHHTIGGSR 9 0 1 Unmodified _FHHTIGGSR_ 0 0 0 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.26 2 506.259582 1010.50461 85247.27 0.24445 0.00012375 0.024143 1.2223E-05 0.26859 0.00013598 506.259505693149 511.26371731679 16.781 0.56062 16.781 16.551 17.111 0 59 16 6 0 0 0 0.0028606 2 4003 73.26 64.488 1 0.89786 0.92659 0 24073000 12583000 11490000 10986 121 4189 4304 17145;17146 17146 FHINQPALK 9 1 0 Unmodified _FHINQPALK_ 0 0 0 Q8NBU5 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.304 2 534.303458 1066.59236 83841.39 0.50669 0.00027073 -0.34381 -0.0001837 0.16288 8.7028E-05 534.303192446612 538.310386133339 49.109 0.36288 49.109 48.894 49.257 0 122 28 6 0 0 0 3.9364E-06 1 26858 133.79 105.62 1 2.2419 2.4188 0 37298000 13110000 24188000 10987 1920 4190 4305 17147 17147 FHINQPALK 9 1 0 Unmodified _FHINQPALK_ 0 0 0 Q8NBU5 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.8127 2 534.303458 1066.59236 83230.69 0.41926 0.00022401 0.5339 0.00028526 0.95316 0.00050928 534.303545978971 538.310557218459 47.099 0.44469 47.099 46.824 47.269 0 166 38 7 0 0 0 0.0020795 2 26033 77.058 61.396 1 2.0178 2.2719 0 57577000 17465000 40112000 10988 1920 4190 4305 17148;17149 17148 FHNLEGFLEEFADIAK 16 1 0 Unmodified _FHNLEGFLEEFADIAK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.9841 3 627.312348 1878.91521 76253.57 0.8761 0.00054959 -0.12564 -7.8817E-05 0.75045 0.00047077 627.646533320056 629.983622655033 133.24 0.22641 133.24 133.13 133.35 0 40 6 10 0 0 0 2.3441E-25 2 87200 126.07 120.6 1 0.83264 0.94201 0 149440000 81820000 67618000 10989 515 4191 4306 17150;17151 17151 FHNLEGFLEEFADIAK 16 1 0 Unmodified _FHNLEGFLEEFADIAK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 941.1249 2 940.464884 1878.91521 62087.24 0.83314 0.00078354 -0.15964 -0.00015014 0.6735 0.00063341 940.966155170567 944.47260486176 133.22 0.25691 133.22 133.1 133.35 0 21 7 7 0 0 0 8.9584E-44 1 87174 151.74 145.3 1 0.7312 0.71676 0 20824000 11716000 9108200 10990 515 4191 4306 17152 17152 FHNLEGFLEEFADIAK 16 1 0 Unmodified _FHNLEGFLEEFADIAK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.9848 3 627.312348 1878.91521 75515.18 0.93536 0.00058676 0.20827 0.00013065 1.1436 0.00071741 627.312571399767 629.983779430135 133.21 0.19466 133.21 133.11 133.3 0 40 5 11 0 0 0 2.455E-45 2 89389 133.23 133.23 1 0.85335 0.9917 0 231670000 128960000 102710000 10991 515 4191 4306 17153;17154 17153 FHPSLR 6 0 1 Unmodified _FHPSLR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 378.7109 2 378.711205 755.407858 97337.71 -0.035828 -1.3569E-05 0.27452 0.00010397 0.2387 9.0397E-05 378.711257018727 383.71534178304 24.288 0.58287 24.288 24.072 24.655 0 94 25 8 0 0 0 0.034782 1 9966 114.67 20.272 1 0.98929 1.1291 0 92727000 46833000 45894000 10992 1570 4192 4307 17155 17155 FHQFLVSETESGNISR 16 0 1 Unmodified _FHQFLVSETESGNISR_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.9744 3 617.639235 1849.89588 77176.95 0.48353 0.00029865 -0.051299 -3.1684E-05 0.43223 0.00026696 617.639169222498 620.975079811304 69.413 0.88065 69.413 69.058 69.939 0 362 74 8 0 0 0 4.7465E-05 2 40246 69.805 69.805 1 1.3579 1.379 0 29164000 11078000 18085000 10993 1694 4193 4308 17156;17157 17156 FHQFLVSETESGNISR 16 0 1 Unmodified _FHQFLVSETESGNISR_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.9734 3 617.639235 1849.89588 77489.3 0.3897 0.0002407 0.096909 5.9855E-05 0.48661 0.00030055 617.639127934936 620.97526702452 67.453 0.97735 67.453 67.013 67.991 0 307 82 6 0 0 0 9.2577E-07 2 39842 90.561 81.722 1 1.5355 1.7619 0 52016000 23733000 28284000 10994 1694 4193 4308 17158;17159 17159 FHQFLVSETESGNISR 16 0 1 Unmodified _FHQFLVSETESGNISR_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.9739 3 617.639235 1849.89588 77250.09 0.42183 0.00026054 -0.061231 -3.7819E-05 0.3606 0.00022272 617.973660762367 620.97545192116 78.526 0.67581 78.526 78.315 78.99 -7.6294E-06 243 42 8 0 0 0 0.055445 1 42114 14.276 14.276 1 0.81135 0.69798 0 6975900 3427000 3548900 10995 1694 4193 4308 17160 17160 FHQFLVSETESGNISR 16 0 1 Unmodified _FHQFLVSETESGNISR_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.9736 3 617.639235 1849.89588 77313.73 0.47812 0.00029531 -0.23141 -0.00014293 0.24671 0.00015238 617.639226340503 620.975052822537 78.599 0.74136 78.599 78.376 79.118 -7.6294E-06 235 48 8 0 0 0 0.0079588 1 41341 25.824 25.824 1 0.70845 0.60846 0 4446800 2621300 1825500 10996 1694 4193 4308 17161 17161 FHSIVR 6 0 1 Unmodified _FHSIVR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.7185 2 379.71903 757.423508 95994.59 0.0019475 7.3949E-07 0.78571 0.00029835 0.78766 0.00029909 379.719086127319 384.723681009378 24.133 0.73211 24.133 23.936 24.668 0 147 30 8 0 0 0 2.8677E-05 1 9814 154.34 68.429 1 0.95859 1.1352 0 409830000 206620000 203210000 10997 785 4194 4309 17162 17162 FHSIVR 6 0 1 Unmodified _FHSIVR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.7192 2 379.71903 757.423508 94950.74 -0.044177 -1.6775E-05 -0.12532 -4.7586E-05 -0.1695 -6.4361E-05 379.719018672275 384.723052381135 23.141 1.143 23.141 22.701 23.844 0 189 49 10 0 0 0 2.3919E-05 1 9008 155.81 67.818 1 0.81005 0.94129 0 367650000 196130000 171530000 10998 785 4194 4309 17163 17163 FHSPPDKDEAEAPSQK 16 2 0 Unmodified _FHSPPDKDEAEAPSQK_ 0 0 1 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;P18887;B2RCY5;B4DEB2;M0QZ96;M0R0D2;M0R1U8;M0QYS5 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.9478 3 594.947957 1781.82204 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.533 1 18.533 18.033 19.033 0 0 0 0 0.0033227 1 5217 50.053 47.156 1 10999 58 4195 4310 17164 17164 FHVEEEGK 8 1 0 Unmodified _FHVEEEGK_ 0 0 0 B4E1H9;V9HWF4;P00558;V9HW85;A0A140VJR3;P07205 B4E1H9 B4E1H9 HEL-S-68p;PGK1;HEL-S-272;PGK2 Phosphoglycerate kinase;Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.7393 2 487.732532 973.45051 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.887 1 19.887 19.387 20.387 0 0 0 0 0.038159 1 6234 58.981 50.209 1 11000 1067 4196 4311 17165 17165 FIAQLQTSIR 10 0 1 Unmodified _FIAQLQTSIR_ 0 0 0 U3KQ54;Q6P1K2;D3DVB3 U3KQ54 U3KQ54 PMF1-BGLAP;PMF1;hCG_1999356 Polyamine-modulated factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.8448 2 588.840405 1175.66626 80453.26 0.93163 0.00054858 0.41141 0.00024226 1.343 0.00079084 588.840331078926 593.844867263863 80.344 0.83544 80.344 80.051 80.886 0 193 70 5 0 0 0 0.018174 1 47691 55.549 14.52 1 1.732 1.8154 0 12353000 4615200 7737800 11001 1852 4197 4312 17166 17166 FIAQLQTSIR 10 0 1 Unmodified _FIAQLQTSIR_ 0 0 0 U3KQ54;Q6P1K2;D3DVB3 U3KQ54 U3KQ54 PMF1-BGLAP;PMF1;hCG_1999356 Polyamine-modulated factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.8458 2 588.840405 1175.66626 80226.84 0.70634 0.00041592 0.63374 0.00037317 1.3401 0.0007891 588.840686237612 593.844987577283 79.218 0.64322 79.218 78.972 79.615 0 187 53 6 0 0 0 0.03976 1 48022 47.187 18.025 1 1.5182 1.5221 0 17951000 7322100 10629000 11002 1852 4197 4312 17167 17167 FIASTGMDR 9 0 1 Oxidation (M) _FIASTGM(ox)DR_ FIASTGM(1)DR FIASTGM(69.82)DR 0 1 0 Q9UMS4;H0YGZ5 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2439 2 507.239667 1012.46478 84340.63 0.53078 0.00026923 0.51877 0.00026314 1.0495 0.00053237 507.239739927445 512.243840288545 25.973 0.51835 25.973 25.712 26.23 1.9073E-06 111 28 7 0 0 0 0.0020424 1 11450 69.825 28.322 1 1.6323 1.6592 0 29454000 11355000 18099000 11003 2114 4198 4313 17168 17168 1939 FIASTGMDR 9 0 1 Oxidation (M) _FIASTGM(ox)DR_ FIASTGM(1)DR FIASTGM(73.26)DR 0 1 0 Q9UMS4;H0YGZ5 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.2432 2 507.239667 1012.46478 84893.07 0.47552 0.0002412 0.33939 0.00017215 0.81491 0.00041336 507.239881826372 512.243846509901 25.627 0.47556 25.627 25.441 25.916 0 113 29 6 0 0 0 0.0013859 2 11217 73.26 31.758 1 1.7068 1.8683 0 30873000 11598000 19275000 11004 2114 4198 4313 17169;17170 17170 1939 FIAVGYVDDTQFVR 14 0 1 Unmodified _FIAVGYVDDTQFVR_ 0 0 0 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U3N9E1 U3N9E1 HLA-A;HLA-C;HLA;HLA-Cw;HLA-A*31;MHC class I HLA-A;HLA-A*0226;HLA-A*33;HLA-A*02;HLA-DQB1;HLA-B;HLA-A2;HLC-C;HLA-B*5501 variant;HLA-CW;HLA-A*0225;HLA A;HLA-A24AK;HLAC;HLA-A*03;HLA-A*24;HLA-B52;HLA-B*35JAC;Cw*03;B*15;B*35;HLA-A*29;HLA-A null;HLA-B15;HLA-B1501V2;HLA-B*3531;HLA-B*35SRE;HLA-B52v;HLA-B*5603;HLA-B*;HLA-B*1522;HLA-B*5101 variant;HLA-B*15IL;HLA-B*15UL;HLA-B*15MD;HLA-B*51IM;HLA-All;HLA-DRB1;HLA-B*58;HLA-A*2410;HLA-B51;HLA-A26;B*56;B-3501;HLA-Bw62.4;HLA-Bw62.1;HLA-Bw62.5;HLA-Bw62.3;HLA-B57;HLA-B*1513;HLA-B35;HLA-B*3512;HLA-A*01 HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain;HLA class I histocompatibility antigen, A-34 alpha chain;HLA class I histocompatibility antigen, A-33 alpha chain;HLA class I histocompatibility antigen, A-31 alpha chain;HLA class I histocompatibility antigen, A-30 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-32 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, B-59 alpha chain;HLA class I histocompatibility antigen, B-55 alpha chain;HLA class I histocompatibility antigen, B-54 alpha chain;HLA class I histocompatibility antigen, A-66 alpha chain;HLA class I histocompatibility antigen, A-43 alpha chain;HLA class I histocompatibility antigen, A-36 alpha chain;HLA class I histocompatibility antigen, A-26 alpha chain;HLA class I histocompatibility antigen, A-23 alpha chain;HLA class I histocompatibility antigen, A-1 alpha chain;HLA class I histocompatibility antigen, A-25 alpha chain;HLA class I histocompatibility antigen, A-11 alpha chain;HLA class I histocompatibility antigen, A-24 alpha chain;HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, Cw-14 alpha chain;HLA class I histocompatibility antigen, Cw-4 alpha chain;HLA class I histocompatibility antigen, Cw-17 alpha chain;HLA class I histocompatibility antigen, B-35 alpha chain;HLA class I histocompatibility antigen, B-78 alpha chain;HLA class I histocompatibility antigen, B-56 alpha chain;HLA class I histocompatibility antigen, B-53 alpha chain;HLA class I histocompatibility antigen, B-52 alpha chain;HLA class I histocompatibility antigen, B-46 alpha chain;HLA class I histocompatibility antigen, B-15 alpha chain;HLA class I histocompatibility antigen, B-57 alpha chain;HLA class I histocompatibility antigen, B-51 alpha chain;HLA class I histocompatibility antigen, B-58 alpha chain MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.7341 2 815.417205 1628.81986 68015.85 0.71861 0.00058597 0.84532 0.00068929 1.5639 0.0012753 816.418562009367 820.421868392403 107.93 0.57786 107.93 107.64 108.22 0 176 43 7 0 0 0 2.4322E-06 1 67333 91.855 91.855 1 0.91642 0.93346 0 14832000 7658900 7173200 11005 395 4199 4314 17171 17171 FIAYQFTDTPLQIK 14 1 0 Unmodified _FIAYQFTDTPLQIK_ 0 0 0 B4E0Q4;B4DZJ7;O00267 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.9578 2 842.950881 1683.88721 67528.19 0.72079 0.00060759 0.47794 0.00040288 1.1987 0.0010105 842.951168845729 846.958716796248 114.7 0.33698 114.7 114.55 114.88 0 58 22 5 0 0 0 0.00020357 2 72851 85.958 85.958 1 1.8029 1.8321 0 6335800 2154200 4181600 11006 1056 4200 4315 17172;17173 17172 FIAYQFTDTPLQIK 14 1 0 Unmodified _FIAYQFTDTPLQIK_ 0 0 0 B4E0Q4;B4DZJ7;O00267 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.9612 2 842.950881 1683.88721 70848.14 0.86168 0.00072636 0.63792 0.00053773 1.4996 0.0012641 842.951230198515 846.958861785126 114.18 0.33371 114.18 114.03 114.36 0 89 23 5 0 0 0 0.00020357 4 74211 85.958 85.958 1 1.5469 1.5442 0 6535500 2499400 4036200 11007 1056 4200 4315 17174;17175;17176;17177 17175 FIAYQFTDTPLQIK 14 1 0 Unmodified _FIAYQFTDTPLQIK_ 0 0 0 B4E0Q4;B4DZJ7;O00267 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 847.4597 2 842.950881 1683.88721 68813.93 0.70601 0.00059513 0.58303 0.00049147 1.289 0.0010866 843.452125253377 846.958858422866 125.8 0.31352 125.8 125.66 125.97 0 48 14 5 0 0 0 0.0018365 1 74665 64.439 64.439 1 1.6532 1.4561 0 1230000 382330 847720 11008 1056 4200 4315 17178 17178 FICTTSAIQNR 11 0 1 Unmodified _FICTTSAIQNR_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;K7ESG8 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.8342 2 655.829711 1309.64487 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.618 1 48.618 48.118 49.118 0 0 0 0 0.035604 1 27236 46.462 30.259 1 11009 89 4201 4316 17179 17179 FICTTSAIQNR 11 0 1 Unmodified _FICTTSAIQNR_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;K7ESG8 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.8341 2 655.829711 1309.64487 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.66 1 48.66 48.16 49.16 0 0 0 0 0.0053025 1 27270 64.711 47.472 1 11010 89 4201 4316 17180 17180 FIDPFCK 7 1 0 Unmodified _FIDPFCK_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.7255 2 463.725664 925.436775 91340.2 0.13621 6.3166E-05 0.52855 0.0002451 0.66476 0.00030827 463.725704499538 467.733024696434 82.742 0.49342 82.742 82.494 82.987 7.6294E-06 133 39 4 0 0 0 0.030596 2 50675 68.485 50.718 1 1.0305 1.0664 0 18618000 10386000 8232000 11011 1740 4202 4317 17181;17182 17181 FIDPFCK 7 1 0 Unmodified _FIDPFCK_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.733 2 463.725664 925.436775 90654.48 0.162 7.5125E-05 0.44487 0.0002063 0.60688 0.00028142 463.725810509474 467.732899580129 95.268 0.78503 95.268 94.899 95.684 0 157 55 4 0 0 0 0.041006 1 52462 59.205 47.837 1 1.769 1.4336 0 2617100 875690 1741400 11012 1740 4202 4317 17183 17183 FIDPFCR 7 0 1 Unmodified _FIDPFCR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.7328 2 477.728738 953.442923 88566.35 0.26827 0.00012816 0.39149 0.00018703 0.65976 0.00031519 477.728787586508 482.732923159237 86.725 0.45042 86.725 86.525 86.975 0 143 32 6 0 0 0 0.0099039 2 52234 113.25 63.445 1 0.8345 0.90283 0 49097000 25927000 23170000 11013 1618 4203 4318 17184;17185 17185 FIDPFCR 7 0 1 Unmodified _FIDPFCR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.7333 2 477.728738 953.442923 86948.8 0.43712 0.00020882 -0.061966 -2.9603E-05 0.37515 0.00017922 477.728675807651 482.732736973917 85.634 0.47327 85.634 85.447 85.92 0 140 34 6 0 0 0 0.026865 2 52692 86.512 51.807 1 0.87757 1.0013 0 93339000 52532000 40806000 11014 1618 4203 4318 17186;17187 17187 FIDPFCR 7 0 1 Unmodified _FIDPFCR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.7332 2 477.728738 953.442923 87901.93 0.3972 0.00018975 -0.13959 -6.6687E-05 0.25761 0.00012307 477.728591581277 482.732733185937 98.774 0.80508 98.774 98.368 99.173 7.6294E-06 179 47 6 0 0 0 0.062615 1 54825 49.358 26.322 1 1.1756 0.97852 0 7190600 3563500 3627100 11015 1618 4203 4318 17188 17188 FIEGISEK 8 1 0 Unmodified _FIEGISEK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.7478 2 461.74765 921.480748 88936.48 0.30821 0.00014231 0.059966 2.7689E-05 0.36818 0.00017 461.747601782219 465.754652758803 47.953 1.1526 47.953 47.55 48.703 0 411 95 7 0 0 0 0.012282 1 25902 67.981 18.622 1 0.94529 1.102 0 266580000 132520000 134060000 11016 2023;1687 4204 4319 17189 17189 FIEGISEK 8 1 0 Unmodified _FIEGISEK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.7548 2 461.74765 921.480748 NaN NaN NaN 0.12056 5.5668E-05 NaN NaN NaN NaN 47.754 0.23181 47.754 47.55 47.782 0 0 0 0 0.0067226 1 25931 84.568 35.209 1 NaN NaN 0 59962000 0 59962000 11017 2023;1687 4204 4319 17190 17190 FIEGISEK 8 1 0 Unmodified _FIEGISEK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.7546 2 461.74765 921.480748 88017.63 0.35241 0.00016273 -0.097385 -4.4967E-05 0.25503 0.00011776 461.747559041765 465.754584653303 46.848 1.194 46.848 46.524 47.718 3.8147E-06 432 95 8 0 0 0 0.0065453 2 25821 86.794 37.435 1 0.92067 1.074 0 263880000 131010000 132870000 11018 2023;1687 4204 4319 17191;17192 17192 FIEGISEK 8 1 0 Unmodified _FIEGISEK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.7477 2 461.74765 921.480748 88393.15 0.34804 0.00016071 -0.15351 -7.0882E-05 0.19454 8.9826E-05 461.747540587198 465.7545410899 54.812 1.8375 54.812 54.441 56.279 0 545 121 8 0 0 0 0.042651 1 27272 46.426 7.6341 1 1.3896 1.1309 0 30725000 12137000 18588000 11019 2023;1687 4204 4319 17193 17193 FIEGISEK 8 1 0 Unmodified _FIEGISEK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 465.7545 2 461.74765 921.480748 89069.24 0.061801 2.8536E-05 -0.12405 -5.7278E-05 -0.062246 -2.8742E-05 461.747602925608 465.754524100607 55.177 1.6743 55.177 54.826 56.5 0 490 107 8 0 0 0 0.043896 2 26882 45.972 12.422 1 1.4109 1.163 0 29676000 11933000 17743000 11020 2023;1687 4204 4319 17194;17195 17194 FIEIAAR 7 0 1 Unmodified _FIEIAAR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 410.2396 2 410.239796 818.465038 94229.2 0.082904 3.4011E-05 0.0038036 1.5604E-06 0.086708 3.5571E-05 410.23972807586 415.243786584677 58.74 1.3342 58.74 58.335 59.67 0 350 106 6 0 0 0 0.026941 2 33200 83.287 44.069 1 1.2291 1.4549 0 364140000 153450000 210690000 11021 999 4205 4320 17196;17197 17196 FIEIAAR 7 0 1 Unmodified _FIEIAAR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.2438 2 410.239796 818.465038 93426.58 0.17085 7.0089E-05 0.05741 2.3552E-05 0.22826 9.364E-05 410.239770965603 415.243789597564 57.737 1.3227 57.737 57.265 58.588 0 470 105 6 0 0 0 0.032902 1 33373 64.803 25.585 1 0.82784 0.96289 0 397520000 202130000 195390000 11022 999 4205 4320 17198 17198 FIFNGEFK 8 1 0 Unmodified _FIFNGEFK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.2643 2 501.258185 1000.50182 86211.28 0.48179 0.0002415 0.011732 5.8808E-06 0.49352 0.00024738 501.258200132768 505.265223800129 88.943 0.24464 88.943 88.804 89.049 0 65 16 5 0 0 0 0.0062953 1 53630 87.754 67.472 1 0.83107 0.91005 0 52188000 26979000 25209000 11023 1718 4206 4321 17199 17199 FIFNGEFK 8 1 0 Unmodified _FIFNGEFK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.2643 2 501.258185 1000.50182 NaN NaN NaN -1.2035 -0.00060328 NaN NaN NaN NaN 87.823 0.31461 87.823 87.674 87.988 0 0 0 0 0.017319 1 54103 67.032 37.883 1 NaN NaN 0 33956000 0 33956000 11024 1718 4206 4321 17200 17200 FIFNGEFK 8 1 0 Unmodified _FIFNGEFK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.2655 2 501.258185 1000.50182 85555.15 0.19005 9.5262E-05 0.29902 0.00014989 0.48907 0.00024515 501.258273558005 505.265289115287 101.51 0.47156 101.51 101.28 101.76 0 116 30 6 0 0 0 0.052409 1 57500 42.869 31.501 1 0.85334 0.67317 0 5441300 3004300 2437000 11025 1718 4206 4321 17201 17201 FIFNGEFK 8 1 0 Unmodified _FIFNGEFK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.2654 2 501.258185 1000.50182 84401.7 0.12224 6.1275E-05 0.073836 3.7011E-05 0.19608 9.8286E-05 501.25815459872 505.265152997431 101.3 0.38243 101.3 101.13 101.51 0 103 22 6 0 0 0 0.014589 2 56516 62.659 51.742 1 0.77687 0.63768 0 5251500 2759700 2491800 11026 1718 4206 4321 17202;17203 17202 FIIENTDLAVANSIR 15 0 1 Unmodified _FIIENTDLAVANSIR_ 0 0 0 B7Z377;Q6FGR6;B7Z6D1;P19387;H3BRR2 B7Z377 B7Z377 POLR2C DNA-directed RNA polymerase II subunit RPB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.4586 2 838.454319 1674.89408 68449.05 0.91173 0.00076444 -0.81576 -0.00068397 0.095974 8.047E-05 838.45353325123 843.458087915983 109.34 0.30769 109.34 109.2 109.51 0 57 21 5 0 0 0 0.00018076 2 68413 77.593 71.87 1 1.0336 1.0464 0 7665100 3720200 3944900 11027 1087 4207 4322 17204;17205 17204 FIIENTDLAVANSIR 15 0 1 Unmodified _FIIENTDLAVANSIR_ 0 0 0 B7Z377;Q6FGR6;B7Z6D1;P19387;H3BRR2 B7Z377 B7Z377 POLR2C DNA-directed RNA polymerase II subunit RPB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.4583 2 838.454319 1674.89408 72049.25 0.80412 0.00067422 0.22157 0.00018578 1.0257 0.00086 838.956428647091 843.459006608502 108.82 0.28675 108.82 108.71 108.99 0 53 21 4 0 0 0 4.6388E-10 1 69725 113.22 106.18 1 1.2385 1.2521 0 9755600 5040200 4715400 11028 1087 4207 4322 17206 17206 FIIHAPPGEFNEVFNDVR 18 0 1 Unmodified _FIIHAPPGEFNEVFNDVR_ 0 0 0 Q53GE2;Q53GC7;A4D0V4;P47755;C9JUG7;F8W9N7;A0A0D9SET8 Q53GE2 Q53GE2 CAPZA2 F-actin-capping protein subunit alpha-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3564 3 701.021568 2100.04287 75666.14 0.78231 0.00054842 0.4001 0.00028048 1.1824 0.0008289 701.355758626363 704.358405979258 111.38 0.39911 111.38 111.16 111.56 0 68 26 4 0 0 0 0.011625 1 71757 22.646 22.646 1 0.95305 0.94708 0 7446900 4569900 2877000 11029 659 4208 4323 17207 17207 FILNLPTFSVR 11 0 1 Unmodified _FILNLPTFSVR_ 0 0 0 A0A087WVV1;B7Z478;A0A140VJS6;P49721 A0A087WVV1 A0A087WVV1 PSMB2 Proteasome subunit beta type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.8849 2 653.87953 1305.74451 76216.94 1.0032 0.00065595 0.49923 0.00032644 1.5024 0.00098239 653.879483047487 658.883778038142 126.14 0.48507 126.14 125.91 126.39 0 127 37 5 0 0 0 0.00019135 2 82017 93.178 60.337 1 2.2489 2.2888 0 7162300 2159600 5002700 11030 421 4209 4324 17208;17209 17208 FILNLPTFSVR 11 0 1 Unmodified _FILNLPTFSVR_ 0 0 0 A0A087WVV1;B7Z478;A0A140VJS6;P49721 A0A087WVV1 A0A087WVV1 PSMB2 Proteasome subunit beta type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.884 2 653.87953 1305.74451 75745.38 0.95355 0.00062351 0.48498 0.00031712 1.4385 0.00094063 653.879792788201 658.883670098629 125.68 0.4688 125.68 125.46 125.93 7.6294E-06 105 31 5 0 0 0 0.00048356 2 83657 76.465 59.039 1 2.3542 2.3499 0 8991000 2911500 6079400 11031 421 4209 4324 17210;17211 17210 FILPVNEGK 9 1 0 Unmodified _FILPVNEGK_ 0 0 0 A0A0S2Z5I7;A0A087X020;Q9Y3A5 A0A0S2Z5I7 A0A0S2Z5I7 SBDS Ribosome maturation protein SBDS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.7999 2 508.792392 1015.57023 91295.96 0.436 0.00022184 -0.0557 -2.834E-05 0.3803 0.0001935 509.293480375419 512.799489743495 80.301 0.56528 80.301 80.06 80.625 0 96 45 4 0 0 0 0.0095602 1 48911 60.074 53.338 1 4.2233 4.2402 0 6952800 1936800 5016100 11032 442 4210 4325 17212 17212 FILSLASCK 9 1 0 Unmodified _FILSLASCK_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.7941 2 519.786253 1037.55795 83910.92 0.15158 7.8791E-05 -0.16626 -8.642E-05 -0.014676 -7.6286E-06 519.786085307728 523.793501241912 89.476 0.67195 89.476 89.215 89.887 0 233 58 6 0 0 0 0.0019924 2 53915 78.192 70.501 1 0.84479 0.92972 0 54935000 30115000 24820000 11033 2023;1687 4211 4326 17213;17214 17213 FILSLASCK 9 1 0 Unmodified _FILSLASCK_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.7942 2 519.786253 1037.55795 84326.39 0.27826 0.00014464 0.14045 7.3002E-05 0.41871 0.00021764 519.786161690989 523.793596413471 88.368 0.65189 88.368 88.106 88.758 0 240 58 6 0 0 0 0.0018938 1 54403 79.474 72.835 1 0.93744 1.0502 0 81235000 37708000 43527000 11034 2023;1687 4211 4326 17215 17215 FILSLASCK 9 1 0 Unmodified _FILSLASCK_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.7939 2 519.786253 1037.55795 83339.14 0.23039 0.00011976 -0.011 -5.7175E-06 0.21939 0.00011404 519.786166128729 523.793288056159 102.14 0.86137 102.14 101.91 102.78 0 239 62 6 0 0 0 0.012314 2 57854 57.59 54.018 1 1.3021 1.0401 0 20277000 8525800 11751000 11035 2023;1687 4211 4326 17216;17217 17216 FILSLASCK 9 1 0 Unmodified _FILSLASCK_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.7866 2 519.786253 1037.55795 83873.16 0.19657 0.00010217 0.095545 4.9663E-05 0.29211 0.00015183 519.78622640688 523.793303527796 101.93 0.84137 101.93 101.72 102.56 0 243 64 6 0 0 0 0.020403 2 56892 56.729 44.961 1 1.3505 1.0834 0 18763000 7462700 11301000 11036 2023;1687 4211 4326 17218;17219 17219 FIMESGAK 8 1 0 Oxidation (M) _FIM(ox)ESGAK_ FIM(1)ESGAK FIM(57.18)ESGAK 0 1 0 P23396;Q53G83;E9PL09;H0YEU2;A7E2S3;Q9NQS8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.7272 2 449.720578 897.426604 89545.44 0.20764 9.3382E-05 -0.23564 -0.00010597 -0.028 -1.2592E-05 449.720531556271 453.727631802414 21.497 0.50133 21.497 21.282 21.784 0 146 27 9 0 0 0 0.010868 1 7693 57.177 20.992 1 1.7058 1.77 0 29441000 10181000 19260000 11037 1511 4212 4327 17220 17220 1280 FINEDRLPHLLLYGPPGTGK 20 1 1 Unmodified _FINEDRLPHLLLYGPPGTGK_ 0 0 1 Q6LES9;A8K3S0;Q59GW7;P40937;C9JH72;F5H304;F5H0U6 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.3079 4 560.057386 2236.20044 83083.16 0.67948 0.00038055 -0.22483 -0.00012592 0.45464 0.00025463 560.307825516901 564.562918442779 113.71 0.38984 113.71 113.54 113.93 -7.6294E-06 79 19 6 0 0 0 0.058284 1 65348 7.6872 7.6872 1 0.9107 0.7841 0 1881700 835610 1046100 11038 726 4213 4328 17221 17221 FINHLCDPNIIPVR 14 0 1 Unmodified _FINHLCDPNIIPVR_ 0 0 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.2645 3 569.971492 1706.89265 NaN NaN NaN 0.5487 0.00031274 NaN NaN NaN NaN 91.545 0.077423 91.545 91.501 91.579 0 0 0 0 0.028565 1 56657 24.558 16.217 1 NaN NaN 0 3577400 3577400 0 11039 364 4214 4329 17222 17222 FINHLCDPNIIPVR 14 0 1 Unmodified _FINHLCDPNIIPVR_ 0 0 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.3074 3 569.971492 1706.89265 84687.1 0.56127 0.00031991 0.0972 5.5401E-05 0.65847 0.00037531 570.306031922002 573.307684140637 105.04 0.54443 105.04 104.75 105.3 0 72 31 4 0 0 0 0.04568 1 59871 18.413 14.51 1 1.5496 1.3601 0 1741500 799350 942130 11040 364 4214 4329 17223 17223 FINHSCEPNCYSR 13 0 1 Unmodified _FINHSCEPNCYSR_ 0 0 0 Q03164;B4DIJ7 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180;Histone-lysine N-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.2409 3 561.904929 1682.69296 80616.36 0.54183 0.00030446 -0.43027 -0.00024177 0.11155 6.2683E-05 562.239210758585 565.240866514701 28.393 0.43387 28.393 28.2 28.633 0 91 21 7 0 0 0 0.019836 1 11342 24.929 24.929 1 1.9362 1.6458 0 2867000 986460 1880600 11041 1680 4215 4330 17224 17224 FINLQPSTLTDK 12 1 0 Unmodified _FINLQPSTLTDK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.8818 2 688.874642 1375.73473 NaN NaN NaN 0.039012 2.6874E-05 NaN NaN NaN NaN 89.216 0.66124 89.216 88.817 89.478 0 0 0 0 0.00010458 2 53783 92.538 73.758 1 NaN NaN 0 9080500 0 9080500 11042 1920 4216 4331 17225;17226 17226 FINLQPSTLTDK 12 1 0 Unmodified _FINLQPSTLTDK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.8745 2 688.874642 1375.73473 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.253 1 89.253 88.753 89.753 0 0 0 0 0.0033635 1 53877 66.758 23.476 1 11043 1920 4216 4331 17227 17227 FINLQPSTLTDK 12 1 0 Unmodified _FINLQPSTLTDK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.8812 2 688.874642 1375.73473 NaN NaN NaN -0.32486 -0.00022379 NaN NaN NaN NaN 88.444 0.44808 88.444 88.136 88.584 0 0 0 0 0.00056676 1 54477 87.568 57.758 1 NaN NaN 0 12067000 0 12067000 11044 1920 4216 4331 17228 17228 FINLQPSTLTDK 12 1 0 Unmodified _FINLQPSTLTDK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8752 2 688.874642 1375.73473 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.422 1 88.422 87.922 88.922 0 0 0 0 8.9303E-05 1 54536 90.827 36.761 1 11045 1920 4216 4331 17229 17229 FINLQPSTLTDK 12 1 0 Unmodified _FINLQPSTLTDK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.8818 2 688.874642 1375.73473 NaN NaN NaN -0.21784 -0.00015006 NaN NaN NaN NaN 102.13 0.43199 102.13 101.91 102.35 0 0 0 0 0.045417 1 57936 42.336 20.59 1 NaN NaN 0 1710800 0 1710800 11046 1920 4216 4331 17230 17230 FINNEYYPADLQVAPTQDLR 20 0 1 Unmodified _FINNEYYPADLQVAPTQDLR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1189.592 2 1184.08441 2366.15428 56143.38 0.13668 0.00016184 0.43881 0.00051958 0.57549 0.00068143 1184.58698021468 1189.59025456094 109.46 0.5004 109.46 109.27 109.77 0 137 38 6 0 0 0 4.5389E-06 3 68579 58.487 58.487 1 1.2539 1.2774 0 18593000 6520700 12073000 11047 1412 4217 4332 17231;17232;17233 17233 FINNEYYPADLQVAPTQDLR 20 0 1 Unmodified _FINNEYYPADLQVAPTQDLR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1189.5878 2 1184.08441 2366.15428 56355.98 0.18865 0.00022338 -0.081831 -9.6895E-05 0.10682 0.00012649 1184.58652013806 1189.08856992166 109 0.32825 109 108.83 109.16 0 124 24 7 0 0 0 2.1974E-06 2 69808 68.809 68.809 1 1.3283 1.4292 0 25727000 11058000 14669000 11048 1412 4217 4332 17234;17235 17234 FINNEYYPADLQVAPTQDLR 20 0 1 Unmodified _FINNEYYPADLQVAPTQDLR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1189.089 2 1184.08441 2366.15428 55845.83 -0.13296 -0.00015743 0.86557 0.0010249 0.73262 0.00086748 1184.58684883602 1189.59116756468 120.42 0.43497 120.42 120.23 120.66 0 132 19 10 0 0 0 0.00020994 1 71392 37.156 36.911 1 1.5937 1.3022 0 14051000 5155300 8896000 11049 1412 4217 4332 17236 17236 FINNEYYPADLQVAPTQDLR 20 0 1 Unmodified _FINNEYYPADLQVAPTQDLR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1189.5902 2 1184.08441 2366.15428 56146.65 0.38971 0.00046145 0.1817 0.00021515 0.57141 0.0006766 1184.5855512145 1189.59044540385 120.2 0.44334 120.2 119.98 120.43 7.6294E-06 135 21 9 0 0 0 0.0032231 2 70359 42.568 42.568 1 1.6084 1.3185 0 13550000 5100300 8450100 11050 1412 4217 4332 17237;17238 17237 FIPDDITFDDEPK 13 1 0 Unmodified _FIPDDITFDDEPK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.3725 2 776.364304 1550.71405 69812.23 0.59921 0.00046521 -0.014632 -1.1359E-05 0.58458 0.00045385 776.36412432593 780.371667026112 99.626 0.94675 99.626 99.132 100.08 0 295 69 6 0 0 0 0.00013091 2 60964 79.659 69.427 1 1.1736 1.1529 0 23294000 11660000 11633000 11051 2033 4218 4333 17239;17240 17240 FIPDDITFDDEPK 13 1 0 Unmodified _FIPDDITFDDEPK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.3712 2 776.364304 1550.71405 71187.02 0.72465 0.00056259 0.086719 6.7325E-05 0.81137 0.00062992 776.363944368445 780.371446410907 99.048 0.83398 99.048 98.543 99.377 0 278 69 7 0 0 0 0.0020343 1 61966 55.401 44.877 1 1.1215 1.2024 0 22931000 11191000 11740000 11052 2033 4218 4333 17241 17241 FIPDDITFDDEPK 13 1 0 Unmodified _FIPDDITFDDEPK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.3726 2 776.364304 1550.71405 68566.2 1.0148 0.00078785 0.39934 0.00031003 1.4141 0.0010979 776.364068057694 780.371630535396 111.97 0.89696 111.97 111.64 112.54 0 223 53 7 0 0 0 0.014625 2 64935 36.952 31.185 1 1.5402 1.2308 0 9030400 3310500 5719900 11053 2033 4218 4333 17242;17243 17243 FIPDDITFDDEPK 13 1 0 Unmodified _FIPDDITFDDEPK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.874 2 776.364304 1550.71405 67567.39 0.70567 0.00054785 0.91565 0.00071088 1.6213 0.0012587 776.364305593245 780.371621864495 111.94 1.0205 111.94 111.64 112.66 -7.6294E-06 204 56 7 0 0 0 0.016957 1 63962 36.417 26.185 1 1.5959 1.3041 0 5590100 1982700 3607300 11054 2033 4218 4333 17244 17244 FIPEITISDILR 12 0 1 Unmodified _FIPEITISDILR_ 0 0 0 C9JVN9;A8K9B2;Q9H9P8 C9JVN9 C9JVN9 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.9139 2 708.908485 1415.80242 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.68 1 129.68 129.18 130.18 0 0 0 0 0.019112 1 84515 51.927 31.623 1 11055 783 4219 4334 17245 17245 FIPEITISDILR 12 0 1 Unmodified _FIPEITISDILR_ 0 0 0 C9JVN9;A8K9B2;Q9H9P8 C9JVN9 C9JVN9 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.4103 2 708.908485 1415.80242 81835.77 0.77416 0.00054881 0.13206 9.3617E-05 0.90622 0.00064243 708.908662110947 714.414346204073 129.24 0.30643 129.24 129.12 129.42 0 35 16 4 0 0 0 0.0043643 1 86331 53.683 39.016 1 1.6975 1.7118 0 6247100 2217300 4029800 11056 783 4219 4334 17246 17246 FIQPNIGELPTALK 14 1 0 Unmodified _FIQPNIGELPTALK_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.9474 2 770.940316 1539.86608 72111.4 0.98199 0.00075706 0.13878 0.00010699 1.1208 0.00086405 771.441964466147 774.947236412765 123.25 0.34402 123.25 123.06 123.41 0 60 14 6 0 0 0 0.023159 1 73579 33.057 33.057 1 1.7601 1.4042 0 2930200 1223400 1706800 11057 1725 4220 4335 17247 17247 FIQPNIGELPTALK 14 1 0 Unmodified _FIQPNIGELPTALK_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 774.9479 2 770.940316 1539.86608 70996.49 1.0244 0.00078979 0.0539 4.1554E-05 1.0783 0.00083134 770.939966107911 774.94725886347 123.05 0.41477 123.05 122.88 123.3 7.6294E-06 78 19 6 0 0 0 0.054204 1 72559 24.291 24.291 1 1.4807 1.1545 0 3479700 1422400 2057300 11058 1725 4220 4335 17248 17248 FIQTFGK 7 1 0 Unmodified _FIQTFGK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 420.7343 2 420.734346 839.454139 92770.95 -0.22495 -9.4645E-05 -0.37549 -0.00015798 -0.60045 -0.00025263 420.734313732098 424.741539554425 54.997 1.0812 54.997 54.541 55.622 0 226 70 5 0 0 0 0.037563 1 27562 60.788 60.788 1 0.39368 0.30796 0 3844200 2501200 1343000 11059 1665 4221 4336 17249 17249 FIQTFGK 7 1 0 Unmodified _FIQTFGK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 420.7343 2 420.734346 839.454139 93271.01 -0.47206 -0.00019861 0.039225 1.6503E-05 -0.43283 -0.00018211 420.734401915686 424.741683350369 55.285 1.046 55.285 54.79 55.836 0 215 64 5 0 0 0 0.053301 1 27118 53.554 50.162 1 0.40212 0.32592 0 2955600 2149000 806630 11060 1665 4221 4336 17250 17250 FISHQDIR 8 0 1 Unmodified _FISHQDIR_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;Q2KJU6;Q2KJU5;Q2KJU3;A0A0C4DFM9 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 339.1826 3 339.182169 1014.52468 NaN NaN NaN 0.48681 0.00016512 NaN NaN NaN NaN 23.045 0.26989 23.045 22.91 23.179 1.9073E-06 0 0 0 0.015449 1 8996 49.423 24.286 1 NaN NaN 0 2712000 2712000 0 11061 11 4222 4337 17251 17251 FITDNTVEER 10 0 1 Unmodified _FITDNTVEER_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3057 2 612.298767 1222.58298 76338.7 0.68798 0.00042125 -0.11493 -7.0374E-05 0.57305 0.00035088 612.298775020647 617.302768375129 46.646 0.56741 46.646 46.261 46.828 0 181 48 6 0 0 0 1.0331E-09 1 25065 133.57 109.42 1 2.6827 3.1716 0 257400000 73433000 183970000 11062 1391 4223 4338 17252 17252 FITDNTVEER 10 0 1 Unmodified _FITDNTVEER_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.3022 2 612.298767 1222.58298 76422.43 0.42818 0.00026218 -0.0011377 -6.966E-07 0.42705 0.00026148 612.298904634084 617.302855446603 45.691 0.91558 45.691 45.368 46.284 0 356 77 6 0 0 0 3.7286E-09 1 24944 125.16 100.34 1 2.2886 2.6583 0 355370000 107820000 247550000 11063 1391 4223 4338 17253 17253 FITDNTVEER 10 0 1 Unmodified _FITDNTVEER_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.3026 2 612.298767 1222.58298 77169.13 0.4183 0.00025612 0.1003 6.1414E-05 0.5186 0.00031754 612.298861626881 617.302869108883 53.568 1.1124 53.568 53.175 54.287 0 408 85 8 0 0 0 0.00021283 3 26456 93.649 85.117 1 4.9806 4.2817 0 44701000 7059300 37641000 11064 1391 4223 4338 17254;17255;17256 17254 FITDNTVEER 10 0 1 Unmodified _FITDNTVEER_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.3029 2 612.298767 1222.58298 77364.88 0.3427 0.00020984 0.11929 7.3041E-05 0.46199 0.00028288 612.298990248404 617.302830266819 54.058 1.3469 54.058 53.7 55.047 3.8147E-06 380 100 7 0 0 0 0.0068403 2 26166 58.246 53.281 1 4.7467 4.1404 0 36573000 5973500 30599000 11065 1391 4223 4338 17257;17258 17257 FITHAPPGEFNEVFNDVR 18 0 1 Unmodified _FITHAPPGEFNEVFNDVR_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.3456 3 697.009439 2088.00649 72849.92 0.81037 0.00056483 0.46697 0.00032548 1.2773 0.00089031 697.345565906735 700.345571977356 98.167 0.95882 98.167 97.672 98.631 0 343 82 8 0 0 0 2.6026E-05 1 61329 49.463 44.753 1 0.92834 1.0378 0 44611000 21534000 23077000 11066 43 4224 4339 17259 17259 FITYPFDQNR 10 0 1 Unmodified _FITYPFDQNR_ 0 0 0 A0A024R0H6;Q8N7H5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.8196 2 650.81967 1299.62479 75950.32 0.9351 0.00060858 0.050173 3.2653E-05 0.98528 0.00064124 650.819467911382 655.82388605483 85.676 0.77283 85.676 85.215 85.988 0 190 58 4 0 0 0 0.0010045 1 52653 77.732 73.433 1 1.5912 1.8422 0 67333000 15991000 51342000 11067 46 4225 4340 17260 17260 FKDPNAPK 8 2 0 Unmodified _FKDPNAPK_ 0 0 1 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;B2RPK0;P09429;B3KQ05;D3DQY9;Q53TD0;P23497 Q5T7C4 Q5T7C4 HMGB1;HMGB1P1;hCG_1991922;SP100 Putative high mobility group protein B1-like 1;High mobility group protein B1;Nuclear autoantigen Sp-100 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.7477 2 458.747985 915.481417 NaN NaN NaN 0.36611 0.00016795 NaN NaN NaN NaN 17.499 0.30394 17.499 17.377 17.681 0 0 0 0 1.5691E-08 1 4437 143.11 114.68 1 NaN NaN 0 7977500 7977500 0 11068 392 4226 4341 17261 17261 FLAAGTHLGGTNLDFQMEQYIYK 23 1 0 Oxidation (M) _FLAAGTHLGGTNLDFQM(ox)EQYIYK_ FLAAGTHLGGTNLDFQM(1)EQYIYK FLAAGTHLGGTNLDFQM(94.2)EQYIYK 0 1 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 881.4346 3 878.428334 2632.26317 64749.7 0.44514 0.00039102 0.27858 0.00024471 0.72372 0.00063573 879.097197727303 881.434164485294 102.75 1.0836 102.75 102.29 103.37 0 562 91 9 0 0 0 1.1495E-12 2 63147 94.201 94.201 1 2.3979 2.7193 0 94745000 28752000 65993000 11069 119 4227 4342 17262;17263 17263 102 FLAAGTHLGGTNLDFQMEQYIYK 23 1 0 Oxidation (M) _FLAAGTHLGGTNLDFQM(ox)EQYIYK_ FLAAGTHLGGTNLDFQM(1)EQYIYK FLAAGTHLGGTNLDFQM(102.67)EQYIYK 0 1 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.7629 3 878.428334 2632.26317 64718.02 0.34335 0.00030161 0.25105 0.00022053 0.5944 0.00052214 878.763124365533 881.434241566197 101.86 0.94782 101.86 101.44 102.38 0 566 73 11 0 0 0 7.6413E-17 1 64059 102.67 102.67 1 2.4026 2.7618 0 173410000 56981000 116430000 11070 119 4227 4342 17264 17264 102 FLANVSTVLTSK 12 1 0 Unmodified _FLANVSTVLTSK_ 0 0 0 CON__P01966 CON__P01966 CON__P01966 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.3679 2 640.366453 1278.71835 NaN NaN NaN 0.20096 0.00012869 NaN NaN NaN NaN 95.408 0.96005 95.408 95.03 95.99 0 0 0 0 0.0012951 1 57852 79.693 59.906 1 NaN NaN 0 22076000 22076000 0 + 11071 1149 4228 4343 17265 17265 FLANVSTVLTSK 12 1 0 Unmodified _FLANVSTVLTSK_ 0 0 0 CON__P01966 CON__P01966 CON__P01966 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3668 2 640.366453 1278.71835 NaN NaN NaN 0.26614 0.00017042 NaN NaN NaN NaN 94.473 0.9013 94.473 94.207 95.108 0 0 0 0 0.001813 1 58632 73.781 53.995 1 NaN NaN 0 31776000 31776000 0 + 11072 1149 4228 4343 17266 17266 FLANVSTVLTSK 12 1 0 Unmodified _FLANVSTVLTSK_ 0 0 0 CON__P01966 CON__P01966 CON__P01966 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3669 2 640.366453 1278.71835 NaN NaN NaN 0.25937 0.00016609 NaN NaN NaN NaN 108.63 0.71622 108.63 108.34 109.05 0 0 0 0 0.0014135 1 62355 78.342 48.532 1 NaN NaN 0 6585500 6585500 0 + 11073 1149 4228 4343 17267 17267 FLANVSTVLTSK 12 1 0 Unmodified _FLANVSTVLTSK_ 0 0 0 CON__P01966 CON__P01966 CON__P01966 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.3675 2 640.366453 1278.71835 NaN NaN NaN -0.039334 -2.5188E-05 NaN NaN NaN NaN 108.52 0.62389 108.52 108.2 108.83 0 0 0 0 0.020376 1 61309 51.092 39.498 1 NaN NaN 0 5064400 5064400 0 + 11074 1149 4228 4343 17268 17268 FLAQGTMEDK 10 1 0 Oxidation (M) _FLAQGTM(ox)EDK_ FLAQGTM(1)EDK FLAQGTM(73.57)EDK 0 1 0 A4LAA3;P46100;B4DHH8;B4DLE1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.271 2 578.271164 1154.52777 81483.12 0.40257 0.00023279 -0.015886 -9.1864E-06 0.38668 0.00022361 578.271201626105 582.278403065445 26.995 0.37978 26.995 26.806 27.185 1.9073E-06 76 21 6 0 0 0 0.00070512 2 12289 73.573 58.981 1 1.0422 1.0894 0 15081000 8454100 6627300 11075 672 4229 4344 17269;17270 17270 522 FLAQGTMEDK 10 1 0 Oxidation (M) _FLAQGTM(ox)EDK_ FLAQGTM(1)EDK FLAQGTM(68.37)EDK 0 1 0 A4LAA3;P46100;B4DHH8;B4DLE1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.279 2 578.271164 1154.52777 80355.23 0.63429 0.00036679 0.0033923 1.9617E-06 0.63768 0.00036875 578.270908292241 582.278135697552 26.605 0.39723 26.605 26.389 26.786 0 69 20 6 0 0 0 0.0012573 2 11998 68.371 61.702 1 1.2603 1.3164 0 19254000 8466200 10788000 11076 672 4229 4344 17271;17272 17272 522 FLASDLDQK 9 1 0 Unmodified _FLASDLDQK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.7761 2 518.769114 1035.52368 85121.71 0.15552 8.0678E-05 0.71438 0.0003706 0.8699 0.00045128 518.769770482619 522.776332609312 52.769 0.76605 52.769 52.45 53.216 0 247 57 6 0 0 0 0.0074668 2 29317 61.962 37.807 1 1.4365 1.5453 0 32982000 14381000 18601000 11077 1412 4230 4345 17273;17274 17274 FLASDLDQK 9 1 0 Unmodified _FLASDLDQK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.7763 2 518.769114 1035.52368 84805.47 0.25303 0.00013126 -0.055571 -2.8828E-05 0.19746 0.00010244 518.76970952132 522.775727503907 51.541 0.81673 51.541 51.201 52.017 0 236 64 5 0 0 0 0.018789 1 29128 51.749 19.814 1 1.4308 1.5483 0 38671000 15992000 22679000 11078 1412 4230 4345 17275 17275 FLASDLDQK 9 1 0 Unmodified _FLASDLDQK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.7762 2 518.769114 1035.52368 84584.22 0.19343 0.00010035 0.2435 0.00012632 0.43693 0.00022667 518.769134556689 522.776228879254 60.422 0.67492 60.422 60.15 60.825 0 175 58 5 0 0 0 0.0096208 2 30866 60.019 27.179 1 1.6622 1.318 0 4337400 1555500 2782000 11079 1412 4230 4345 17276;17277 17276 FLASSGHDQR 10 0 1 Unmodified _FLASSGHDQR_ 0 0 0 Q9H6Y2;G3V1J0 Q9H6Y2 Q9H6Y2 WDR55 WD repeat-containing protein 55 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.2739 2 559.272887 1116.53122 81416.3 0.12044 6.7361E-05 0.30413 0.00017009 0.42457 0.00023745 559.272912941482 564.277361657148 18.872 0.18744 18.872 18.77 18.957 0 20 6 6 0 0 0 0.0035438 1 4779 64.04 56.115 1 0.79057 0.66082 0 3495100 1800100 1695000 11080 2039 4231 4346 17278 17278 FLAVGLVDNTVR 12 0 1 Unmodified _FLAVGLVDNTVR_ 0 0 0 A8K6V3;Q15393;B3KQH1 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.3776 2 652.372069 1302.72959 76023.06 1.1389 0.00074299 0.36268 0.0002366 1.5016 0.00097959 652.372183585914 657.376354668362 102.08 0.83688 102.08 101.57 102.41 0 293 66 7 0 0 0 0.00014575 2 62589 93.111 93.111 1 1.3643 1.3894 0 30101000 11742000 18359000 11081 764 4232 4347 17279;17280 17280 FLAVGLVDNTVR 12 0 1 Unmodified _FLAVGLVDNTVR_ 0 0 0 A8K6V3;Q15393;B3KQH1 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.8734 2 652.372069 1302.72959 75881.85 0.75924 0.00049531 0.46 0.00030009 1.2192 0.0007954 652.372132155653 657.376381860133 101.13 0.81365 101.13 100.78 101.59 0 280 64 6 0 0 0 0.00022365 3 63498 74.162 74.162 1 1.2818 1.3895 0 27702000 12136000 15567000 11082 764 4232 4347 17281;17282;17283 17283 FLAVGLVDNTVR 12 0 1 Unmodified _FLAVGLVDNTVR_ 0 0 0 A8K6V3;Q15393;B3KQH1 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 652.8741 2 652.372069 1302.72959 76403.05 1.1727 0.00076501 -0.39014 -0.00025452 0.78251 0.00051049 652.371703565851 657.375984891932 114.09 0.65273 114.09 113.84 114.49 0 82 27 5 0 0 0 0.00049783 3 66560 70.1 70.1 1 0.94323 0.78856 0 3571100 1720900 1850200 11083 764 4232 4347 17284;17285;17286 17284 FLAVGLVDNTVR 12 0 1 Unmodified _FLAVGLVDNTVR_ 0 0 0 A8K6V3;Q15393;B3KQH1 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.3716 2 652.372069 1302.72959 NaN NaN NaN 0.27684 0.0001806 NaN NaN NaN NaN 113.87 0.47575 113.87 113.65 114.13 0 0 0 0 0.016393 1 65473 62.303 24.827 1 NaN NaN 0 1641200 1641200 0 11084 764 4232 4347 17287 17287 FLCIFLEK 8 1 0 Unmodified _FLCIFLEK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2908 2 535.291171 1068.56779 87112.2 0.6745 0.00036105 0.20714 0.00011088 0.88164 0.00047193 535.291234367305 539.298179750081 110.14 0.53801 110.14 109.91 110.45 0 87 36 4 0 0 0 0.013893 1 69062 64.265 50.685 1 0.64802 0.67103 0 11190000 7037100 4152900 11085 1665 4233 4348 17288 17288 FLCIFLEK 8 1 0 Unmodified _FLCIFLEK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.2916 2 535.291171 1068.56779 90356.15 0.57336 0.00030691 -0.054749 -2.9307E-05 0.51861 0.00027761 535.291007549071 539.297947850582 109.35 0.57656 109.35 109.17 109.75 0 111 38 5 0 0 0 0.015121 2 70253 61.962 61.962 1 0.55414 0.55818 0 7249800 4771700 2478100 11086 1665 4233 4348 17289;17290 17289 FLCIFLEK 8 1 0 Unmodified _FLCIFLEK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.2925 2 535.291171 1068.56779 83922.79 0.73945 0.00039582 0.29406 0.00015741 1.0335 0.00055322 535.291271674248 539.298047052157 121.18 0.44115 121.18 120.96 121.4 0 67 19 5 0 0 0 0.030566 1 71996 51.854 51.854 1 0.28122 0.23463 0 2237300 1627200 610060 11087 1665 4233 4348 17291 17291 FLCIFLEK 8 1 0 Unmodified _FLCIFLEK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.2914 2 535.291171 1068.56779 86247.77 0.67768 0.00036276 0.032124 1.7196E-05 0.70981 0.00037995 535.291059956429 539.298097376146 120.89 0.60162 120.89 120.63 121.23 0 82 26 5 0 0 0 0.027337 1 70945 53.968 44.754 1 0.30468 0.24547 0 1937500 1550500 386980 11088 1665 4233 4348 17292 17292 FLDDLGNAK 9 1 0 Unmodified _FLDDLGNAK_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.7634 2 496.756007 991.497461 87981.7 0.22773 0.00011312 0.058539 2.908E-05 0.28627 0.0001422 496.756009723758 500.763137497145 61.87 0.71691 61.87 61.562 62.279 -3.8147E-06 217 57 6 0 0 0 0.001077 2 35349 90.308 67.417 1 1.3599 1.4835 0 50220000 19909000 30311000 11089 900 4234 4349 17293;17294 17293 FLDDLGNAK 9 1 0 Unmodified _FLDDLGNAK_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.7633 2 496.756007 991.497461 88080.45 -0.22398 -0.00011127 0.046793 2.3245E-05 -0.17719 -8.802E-05 496.755864777306 500.763293231876 60.772 0.74086 60.772 60.409 61.149 -3.8147E-06 196 63 5 0 0 0 0.0044995 2 35423 69.105 45.581 1 1.4955 1.6569 0 46729000 16245000 30484000 11090 900 4234 4349 17295;17296 17296 FLDDLGNAK 9 1 0 Unmodified _FLDDLGNAK_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 496.7559 2 496.756007 991.497461 87982.89 -0.36688 -0.00018225 0.76549 0.00038026 0.39861 0.00019801 496.756185973583 500.763583505722 71.326 0.62467 71.326 71.039 71.664 0 116 37 4 0 0 0 0.045082 1 36687 40.002 15.847 1 1.1634 0.94858 0 1886400 877620 1008800 11091 900 4234 4349 17297 17297 FLDGIYVSEK 10 1 0 Unmodified _FLDGIYVSEK_ 0 0 0 Q53Z07;P32969;D6RAN4;H0Y9V9;Q2NKY6;H0Y9R4 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.8132 2 585.805697 1169.59684 79730.03 0.56339 0.00033004 0.51245 0.0003002 1.0758 0.00063023 585.806389546352 589.812746176636 85.963 1.7172 85.963 85.352 87.069 0 758 133 10 0 0 0 0.00078086 3 51456 81.338 80.688 1 0.96421 1.1461 0 568620000 298570000 270040000 11092 1537 4235 4350 17298;17299;17300 17298 FLDGIYVSEK 10 1 0 Unmodified _FLDGIYVSEK_ 0 0 0 Q53Z07;P32969;D6RAN4;H0Y9V9;Q2NKY6;H0Y9R4 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.8137 2 585.805697 1169.59684 79583.32 0.87616 0.00051326 0.16443 9.6324E-05 1.0406 0.00060958 585.806320959011 589.812574937743 84.912 1.7601 84.912 84.242 86.002 -7.6294E-06 835 142 10 0 0 0 0.00027596 3 51982 91.584 80.369 1 0.92029 1.0847 0 633490000 316940000 316540000 11093 1537 4235 4350 17301;17302;17303 17301 FLDGIYVSEK 10 1 0 Unmodified _FLDGIYVSEK_ 0 0 0 Q53Z07;P32969;D6RAN4;H0Y9V9;Q2NKY6;H0Y9R4 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.8133 2 585.805697 1169.59684 NaN NaN NaN -0.48604 -0.00028472 NaN NaN NaN NaN 97.759 2.4248 97.759 97.055 99.48 0 0 0 0 0.010843 2 54099 62.463 49.426 1 NaN NaN 0 44885000 0 44885000 11094 1537 4235 4350 17304;17305 17304 FLDGIYVSEK 10 1 0 Unmodified _FLDGIYVSEK_ 0 0 0 Q53Z07;P32969;D6RAN4;H0Y9V9;Q2NKY6;H0Y9R4 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.8064 2 585.805697 1169.59684 NaN NaN NaN -0.85366 -0.00050008 NaN NaN NaN NaN 97.622 0.25609 97.622 97.421 97.677 7.6294E-06 0 0 0 0.011505 1 54100 61.78 27.776 1 NaN NaN 0 3982300 3982300 0 11095 1537 4235 4350 17306 17306 FLDGNELTLADCNLLPK 17 1 0 Unmodified _FLDGNELTLADCNLLPK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 967.4921 2 966.990408 1931.96626 60998.36 0.35223 0.0003406 -0.25391 -0.00024553 0.098323 9.5077E-05 967.491467907149 971.499457318598 120.05 0.53428 120.05 119.85 120.38 0 199 36 8 0 0 0 0.00081079 2 77389 45.257 40.08 1 3.0447 3.0329 0 18988000 4320100 14668000 11096 1362 4236 4351 17307;17308 17308 FLDQNLQK 8 1 0 Unmodified _FLDQNLQK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.2717 2 503.271824 1004.5291 87702.34 0.44477 0.00022384 -0.0087455 -4.4014E-06 0.43603 0.00021944 503.271582448105 507.278644900438 42.297 0.64625 42.297 42.049 42.695 0 160 55 5 0 0 0 0.014311 1 22906 63.301 30.518 1 0.53074 0.54565 0 17929000 12090000 5839300 11097 1486 4237 4352 17309 17309 FLDQSLGEQVVK 12 1 0 Unmodified _FLDQSLGEQVVK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.8749 2 681.866817 1361.71908 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.848 1 82.848 82.348 83.348 0 0 0 0 0.00020697 1 49539 84.882 63.434 1 11098 1412 4238 4353 17310 17310 FLDVENELSR 10 0 1 Unmodified _FLDVENELSR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.311 2 611.309135 1220.60372 NaN NaN NaN 1.2004 0.00073384 NaN NaN NaN NaN 83.905 0.69983 83.905 83.582 84.282 0 0 0 0 0.016753 1 51367 65.305 37.563 1 NaN NaN 0 13516000 13516000 0 11099 1581 4239 4354 17311 17311 FLEDGPCQQAAQVLIR 16 0 1 Unmodified _FLEDGPCQQAAQVLIR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 923.4741 2 922.96981 1843.92507 NaN NaN NaN 1.06 0.00097831 NaN NaN NaN NaN 100.96 0.89236 100.96 100.64 101.54 7.6294E-06 0 0 0 1.7671E-26 1 61886 141.08 118.89 1 NaN NaN 0 35850000 35850000 0 11100 1942 4240 4355 17312 17312 FLEDGPCQQAAQVLIR 16 0 1 Unmodified _FLEDGPCQQAAQVLIR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.4779 2 922.96981 1843.92507 61659.45 0.63778 0.00058865 0.28002 0.00025845 0.9178 0.0008471 922.971314015438 927.97304916687 100.31 1.1134 100.31 100.03 101.15 7.6294E-06 418 90 8 0 0 0 2.4018E-17 5 62909 154.35 141.58 1 0.67125 0.76928 0 83173000 54902000 28272000 11101 1942 4240 4355 17313;17314;17315;17316;17317 17313 FLEDGPCQQAAQVLIR 16 0 1 Unmodified _FLEDGPCQQAAQVLIR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 923.4726 2 922.96981 1843.92507 61354.79 0.95868 0.00088483 -0.43198 -0.0003987 0.5267 0.00048612 922.970529203779 927.973062290224 113.19 1.0265 113.19 112.93 113.96 0 294 49 10 0 0 0 7.4129E-05 1 66034 93.258 78.838 1 1.3765 1.1585 0 27553000 10661000 16892000 11102 1942 4240 4355 17318 17318 FLEDGPCQQAAQVLIR 16 0 1 Unmodified _FLEDGPCQQAAQVLIR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 928.4758 2 922.96981 1843.92507 62653.44 0.51972 0.00047969 0.086925 8.0229E-05 0.60665 0.00055992 922.971044643961 927.973687199166 113.08 1.0542 113.08 112.85 113.91 0 268 52 8 0 0 0 1.8306E-08 2 64810 125.22 111.25 1 1.4279 1.2456 0 27121000 11333000 15788000 11103 1942 4240 4355 17319;17320 17319 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3823 2 668.381571 1334.74859 74063.74 0.91268 0.00061002 -0.25401 -0.00016977 0.65868 0.00044025 668.381613764133 672.38835813838 121.21 4.0439 121.21 120.88 124.92 0 1622 286 13 0 0 0 2.2369E-12 11 78732 140.75 126.59 1 0.76453 0.91504 0 888990000 502760000 386240000 11104 1471 4241 4356 17321;17322;17323;17324;17325;17326;17327;17328;17329;17330;17331 17323 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3823 2 668.381571 1334.74859 76286.87 1.1213 0.00074942 0.020802 1.3903E-05 1.1421 0.00076333 668.381761521106 672.388403204073 126.72 0.97984 126.72 126.19 127.17 0 155 66 5 0 0 0 0.00011853 2 82130 96.331 85.731 1 0.8454 0.85876 0 4595900 1976500 2619400 11105 1471 4241 4356 17332;17333 17332 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3892 2 668.381571 1334.74859 75405.1 0.97054 0.00064869 -0.01818 -1.2151E-05 0.95236 0.00063654 668.381314443454 672.388805827147 127.54 0.87792 127.54 127.13 128 -7.6294E-06 124 54 4 0 0 0 0.00045925 1 83010 76.827 75.339 1 0.87832 0.96964 0 2871400 1445500 1425900 11106 1471 4241 4356 17334 17334 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3814 2 668.381571 1334.74859 77564.02 0.97319 0.00065046 0.28444 0.00019011 1.2576 0.00084057 668.381308215743 672.389231328436 128.67 0.36903 128.67 128.43 128.79 1.5259E-05 51 22 4 0 0 0 0.00093586 1 83916 71.349 71.349 1 0.81573 0.92036 0 2095800 890800 1205000 11107 1471 4241 4356 17335 17335 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3829 2 668.381571 1334.74859 78435.72 0.83974 0.00056127 -0.088758 -5.9324E-05 0.75098 0.00050194 668.381462138309 672.388172025116 132.91 0.92061 132.91 132.47 133.39 0 107 41 5 0 0 0 0.00043239 2 86824 78.934 74.519 1 0.78509 0.78954 0 5251700 2948900 2302800 11108 1471 4241 4356 17336;17337 17336 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.381 2 668.381571 1334.74859 77746.53 0.52854 0.00035326 -0.032192 -2.1517E-05 0.49634 0.00033175 668.381468631964 672.388171596685 137.73 0.31786 137.73 137.61 137.93 0 61 31 4 0 0 0 0.013755 1 89313 47.187 47.187 1 0.96021 1.1083 0 1508700 754720 753990 11109 1471 4241 4356 17338 17338 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.382 2 668.381571 1334.74859 76283.62 0.57966 0.00038743 0.1088 7.2723E-05 0.68846 0.00046016 668.381521215003 672.388840063638 139.59 0.28847 139.59 139.41 139.7 0 92 32 4 0 0 0 0.0052438 1 89814 56.563 56.563 1 0.79823 0.92009 0 1538000 820950 717010 11110 1471 4241 4356 17339 17339 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8824 2 668.381571 1334.74859 76155.52 0.63339 0.00042335 -0.13338 -8.915E-05 0.50001 0.0003342 668.381412105114 672.890243249494 141.16 0.35201 141.16 140.99 141.34 0 89 38 4 0 0 0 0.0018904 1 90198 64.04 61.111 1 0.70109 0.83076 0 1031100 631140 399960 11111 1471 4241 4356 17340 17340 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3819 2 668.381571 1334.74859 76492.99 0.70617 0.00047199 -0.22667 -0.0001515 0.47951 0.00032049 668.381379990162 672.38825219719 141.76 0.45493 141.76 141.6 142.05 0 137 49 5 0 0 0 0.00043239 1 90373 78.934 78.934 1 0.78813 0.92492 0 1185900 742470 443410 11112 1471 4241 4356 17341 17341 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3811 2 668.381571 1334.74859 75446.77 0.80565 0.00053848 -0.37282 -0.00024919 0.43282 0.00028929 668.381074182255 672.388345675382 142.72 1.6054 142.72 141.96 143.56 0 371 164 5 0 0 0 0.00047771 2 90572 75.378 68.483 1 0.82693 0.92226 0 2477600 1541900 935690 11113 1471 4241 4356 17342;17343 17343 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3815 2 668.381571 1334.74859 NaN NaN NaN 0.15053 0.00010061 NaN NaN NaN NaN 125.41 0.69819 125.41 125.18 125.87 0 0 0 0 0.0009811 1 81565 86.624 67.353 1 NaN NaN 0 2592500 2592500 0 11114 1471 4241 4356 17344 17344 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3898 2 668.381571 1334.74859 NaN NaN NaN -0.031312 -2.0928E-05 NaN NaN NaN NaN 126.53 0.33923 126.53 126.35 126.69 7.6294E-06 0 0 0 0.0022441 2 82267 76.465 56.136 1 NaN NaN 0 1634100 0 1634100 11115 1471 4241 4356 17345;17346 17345 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.89 2 668.381571 1334.74859 NaN NaN NaN 0.014194 9.4872E-06 NaN NaN NaN NaN 127.24 0.20224 127.24 127.13 127.33 7.6294E-06 0 0 0 0.0025795 1 82902 73.233 49.078 1 NaN NaN 0 1065400 0 1065400 11116 1471 4241 4356 17347 17347 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3893 2 668.381571 1334.74859 NaN NaN NaN 0.33335 0.00022281 NaN NaN NaN NaN 132.44 0.27261 132.44 132.34 132.62 0 0 0 0 0.046979 1 86564 45.161 23.075 1 NaN NaN 0 730980 0 730980 11117 1471 4241 4356 17348 17348 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3821 2 668.381571 1334.74859 NaN NaN NaN 0.124 8.2882E-05 NaN NaN NaN NaN 139 0.31781 139 138.81 139.12 0 0 0 0 0.0067665 1 89696 63.216 51.169 1 NaN NaN 0 1130200 1130200 0 11118 1471 4241 4356 17349 17349 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8827 2 668.381571 1334.74859 NaN NaN NaN 0.080579 5.3857E-05 NaN NaN NaN NaN 139.95 0.47906 139.95 139.69 140.16 0 0 0 0 0.0059116 1 89841 64.297 53.468 1 NaN NaN 0 742560 742560 0 11119 1471 4241 4356 17350 17350 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3892 2 668.381571 1334.74859 NaN NaN NaN 0.4719 0.00031541 NaN NaN NaN NaN 140.77 0.12439 140.77 140.7 140.82 1.5259E-05 0 0 0 0.018157 1 90122 53.683 33.353 1 NaN NaN 0 431770 0 431770 11120 1471 4241 4356 17351 17351 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3826 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.69 1 124.69 124.19 125.19 7.6294E-06 0 0 0 0.00068453 1 80999 72.607 55.831 1 11121 1471 4241 4356 17352 17352 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3892 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.79 1 127.79 127.29 128.29 0 0 0 0 0.00050868 1 83287 75.378 44.305 1 11122 1471 4241 4356 17353 17353 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3843 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.44 1 129.44 128.94 129.94 0 0 0 0 0.00059709 1 84365 73.985 34.837 1 11123 1471 4241 4356 17354 17354 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3916 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.45 1 129.45 128.95 129.95 0 0 0 0 0.0048021 1 84368 65.305 39.746 1 11124 1471 4241 4356 17355 17355 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3888 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 139.22 1 139.22 138.72 139.72 0 0 0 0 0.035604 1 89750 46.462 33.935 1 11125 1471 4241 4356 17356 17356 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3892 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 139.98 1 139.98 139.48 140.48 0 0 0 0 0.018015 1 89891 54.416 38.754 1 11126 1471 4241 4356 17357 17357 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3821 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 141.51 1 141.51 141.01 142.01 0 0 0 0 0.013268 1 90297 56.563 39.787 1 11127 1471 4241 4356 17358 17358 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3822 2 668.381571 1334.74859 73825.52 0.88818 0.00059364 -0.076111 -5.0871E-05 0.81206 0.00054277 668.381709826072 672.388469321192 120.78 3.8687 120.78 120.38 124.25 7.6294E-06 1638 279 12 0 0 0 5.9987E-17 9 80272 157.96 142.7 1 0.75646 0.89299 0 1003100000 568360000 434740000 11128 1471 4241 4356 17359;17360;17361;17362;17363;17364;17365;17366;17367 17361 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3897 2 668.381571 1334.74859 75852.28 0.99623 0.00066586 0.18499 0.00012364 1.1812 0.00078951 668.381857553017 672.38869333204 124.3 1.0495 124.3 124.19 125.24 0 184 71 6 0 0 0 0.00011853 3 82735 96.331 96.331 1 0.74337 0.75091 0 8425900 4673500 3752400 11129 1471 4241 4356 17368;17369;17370 17369 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3818 2 668.381571 1334.74859 77593.77 0.84149 0.00056243 0.081545 5.4503E-05 0.92303 0.00061694 668.381437618273 672.388719771013 128.23 0.39177 128.23 128.01 128.4 0 69 24 4 0 0 0 0.017726 1 85740 45.161 45.161 1 0.54901 0.59692 0 3475200 2219200 1256000 11130 1471 4241 4356 17371 17371 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.8652 2 668.381571 1334.74859 77096.73 0.89594 0.00059883 -0.087267 -5.8328E-05 0.80867 0.0005405 668.381561430461 672.388486359053 132.89 0.62535 132.89 132.64 133.26 0 111 30 6 0 0 0 0.0019196 2 89009 63.816 63.816 1 0.76164 0.75811 0 6296300 3519300 2777000 11131 1471 4241 4356 17372;17373 17372 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.382 2 668.381571 1334.74859 83175.81 0.60842 0.00040666 0.33805 0.00022595 0.94647 0.00063261 668.381599424182 672.389294602217 138.21 0.33696 138.21 138.03 138.36 0 118 37 5 0 0 0 0.015176 1 91267 46.462 43.054 1 0.64814 0.71885 0 1307500 684390 623100 11132 1471 4241 4356 17374 17374 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3815 2 668.381571 1334.74859 77291.73 0.58788 0.00039293 0.25189 0.00016836 0.83977 0.00056128 668.381598921034 672.890632651255 139.94 0.42467 139.94 139.76 140.19 -1.5259E-05 115 47 4 0 0 0 0.0018904 2 91556 64.04 64.04 1 0.83887 0.92851 0 1747900 1014200 733730 11133 1471 4241 4356 17375;17376 17375 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3822 2 668.381571 1334.74859 77158.64 0.5806 0.00038806 0.2687 0.00017959 0.8493 0.00056766 668.381705913327 672.388773712267 140.48 0.48854 140.48 140.26 140.75 0 157 53 4 0 0 0 0.00028213 1 91709 89.247 89.247 1 0.76971 0.8523 0 1650600 909300 741320 11134 1471 4241 4356 17377 17377 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3818 2 668.381571 1334.74859 76477.01 0.56305 0.00037633 0.072252 4.8292E-05 0.63531 0.00042463 668.381662277542 672.38821656905 141.92 0.38699 141.92 141.75 142.14 0 113 43 4 0 0 0 0.0014303 1 91960 67.563 67.563 1 0.71855 0.79566 0 1646300 1116300 529990 11135 1471 4241 4356 17378 17378 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3895 2 668.381571 1334.74859 NaN NaN NaN -0.11877 -7.9385E-05 NaN NaN NaN NaN 124.92 0.54064 124.92 124.7 125.24 0 0 0 0 0.0027477 1 83344 71.614 60.251 1 NaN NaN 0 2605200 0 2605200 11136 1471 4241 4356 17379 17379 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.382 2 668.381571 1334.74859 NaN NaN NaN 0.235 0.00015707 NaN NaN NaN NaN 125.78 0.27441 125.78 125.62 125.9 0 0 0 0 4.377E-05 1 83857 100.02 71.808 1 NaN NaN 0 2520600 2520600 0 11137 1471 4241 4356 17380 17380 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.382 2 668.381571 1334.74859 NaN NaN NaN 0.22095 0.00014768 NaN NaN NaN NaN 137.41 0.29532 137.41 137.23 137.53 0 0 0 0 0.046979 1 91056 45.161 40.377 1 NaN NaN 0 488760 488760 0 11138 1471 4241 4356 17381 17381 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.383 2 668.381571 1334.74859 NaN NaN NaN 0.32913 0.00021999 NaN NaN NaN NaN 138.98 0.26244 138.98 138.87 139.13 0 0 0 0 0.046979 1 91435 45.161 40.173 1 NaN NaN 0 867680 867680 0 11139 1471 4241 4356 17382 17382 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3823 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.07 1 125.07 124.57 125.57 7.6294E-06 0 0 0 0.00043973 1 83270 76.465 54.958 1 11140 1471 4241 4356 17383 17383 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3836 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.16 1 125.16 124.66 125.66 0 0 0 0 7.0298E-05 1 83339 82.287 56.55 1 11141 1471 4241 4356 17384 17384 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3891 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.73 1 126.73 126.23 127.23 -7.6294E-06 0 0 0 0.00084361 1 84556 70.1 44.541 1 11142 1471 4241 4356 17385 17385 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.4061 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.19 1 127.19 126.69 127.69 0 0 0 0 0.004767 1 84904 65.347 45.018 1 11143 1471 4241 4356 17386 17386 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3882 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128 1 128 127.5 128.5 0 0 0 0 0.0058682 1 85519 64.04 35.313 1 11144 1471 4241 4356 17387 17387 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.382 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.02 1 129.02 128.52 129.52 0 0 0 0 0.0078829 1 86164 61.65 41.321 1 11145 1471 4241 4356 17388 17388 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3889 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 139.16 1 139.16 138.66 139.66 0 0 0 0 0.0036929 1 91459 66.621 42.466 1 11146 1471 4241 4356 17389 17389 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3809 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 140.02 1 140.02 139.52 140.52 0 0 0 0 0.015471 1 91595 55.567 37.748 1 11147 1471 4241 4356 17390 17390 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3816 2 668.381571 1334.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 141.43 1 141.43 140.93 141.93 1.5259E-05 0 0 0 0.0038503 1 91890 66.435 42.28 1 11148 1471 4241 4356 17391 17391 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3817 2 668.381571 1334.74859 77291.73 0.59387 0.00039693 0.12863 8.5971E-05 0.7225 0.0004829 668.381352463902 672.388977966378 139.45 0.39209 139.45 139.18 139.57 0 81 42 4 0 0 0 0.024631 1 91469 82.749 82.749 1 0.57527 0.63837 0 1214400 665510 548910 11149 1471 4241 4356 17392 17392 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.8952 2 668.381571 1334.74859 75852.27 0.91664 0.00061267 0.11139 7.4451E-05 1.028 0.00068712 668.381711547195 672.890429287321 126.11 0.4631 126.11 125.83 126.3 0 96 28 5 0 0 0 0.0065835 1 83908 94.692 94.692 1 0.90942 0.91378 0 7012400 3991200 3021300 11150 1471 4241 4356 17393 17393 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.382 2 668.381571 1334.74859 74058 0.91467 0.00061135 -0.20055 -0.00013405 0.71412 0.00047731 668.381694503654 672.388473236608 133.22 1.978 133.22 132.77 134.75 0 652 84 12 0 0 0 9.8957E-09 6 80967 123.86 113.9 1 1.3339 1.1754 0 255770000 108600000 147170000 11151 1471 4241 4356 17394;17395;17396;17397;17398;17399 17395 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.3885 2 668.381571 1334.74859 79495.6 0.8076 0.00053979 -0.36115 -0.00024138 0.44646 0.0002984 668.883016198227 672.388169250522 141.68 0.16525 141.68 141.61 141.78 -1.5259E-05 37 17 4 0 0 0 0.028583 1 84576 39.622 39.622 1 1.379 1.275 0 571380 198180 373210 11152 1471 4241 4356 17400 17400 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.39 2 668.381571 1334.74859 78179.23 0.81231 0.00054293 -0.33288 -0.00022249 0.47943 0.00032044 668.88298231637 672.388457184236 142.28 0.28354 142.28 142.22 142.5 0 54 31 4 0 0 0 0.013755 1 84702 47.187 47.187 1 1.8524 1.7448 0 377430 133790 243640 11153 1471 4241 4356 17401 17401 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.3893 2 668.381571 1334.74859 73994.92 1.0987 0.00073433 -0.1924 -0.0001286 0.90626 0.00060573 668.38167497062 672.388471190799 132.99 2.4574 132.99 132.14 134.59 0 728 107 13 0 0 0 2.2183E-12 5 79886 140.83 128.05 1 1.3373 1.1643 0 354230000 150650000 203580000 11154 1471 4241 4356 17402;17403;17404;17405;17406 17403 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.3887 2 668.381571 1334.74859 74075.95 0.78175 0.00052251 0.057248 3.8263E-05 0.839 0.00056077 668.381568127234 672.388567940872 134.54 0.67264 134.54 134.04 134.71 0 82 28 6 0 0 0 7.4243E-05 1 81110 98.249 94.356 1 1.3448 1.1317 0 51905000 21990000 29915000 11155 1471 4241 4356 17407 17407 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.39 2 668.381571 1334.74859 76178.88 0.91822 0.00061372 0.17338 0.00011588 1.0916 0.00072961 668.381589181393 672.388933404834 135.24 0.63225 135.24 134.95 135.58 0 59 23 4 0 0 0 0.017726 2 81919 45.161 45.161 1 1.3088 1.1415 0 1327200 438830 888370 11156 1471 4241 4356 17408;17409 17409 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.3891 2 668.381571 1334.74859 77133.55 0.88942 0.00059447 -0.38147 -0.00025497 0.50795 0.0003395 668.38132696554 672.388238543495 138.6 0.30814 138.6 138.44 138.75 0 92 33 5 0 0 0 0.025895 1 83163 40.994 40.994 1 1.3207 1.1611 0 745930 335170 410760 11157 1471 4241 4356 17410 17410 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.3898 2 668.381571 1334.74859 76426.77 0.85136 0.00056903 -0.093306 -6.2364E-05 0.75805 0.00050667 668.381643938535 672.388614366827 143.05 0.34207 143.05 142.92 143.26 0 74 35 4 0 0 0 0.03746 1 84071 36.424 36.424 1 1.4689 1.2673 0 608920 223830 385080 11158 1471 4241 4356 17411 17411 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.3892 2 668.381571 1334.74859 NaN NaN NaN -0.2113 -0.00014123 NaN NaN NaN NaN 137.54 0.23738 137.54 137.44 137.68 0 0 0 0 0.012829 1 82971 55.549 39.887 1 NaN NaN 0 344020 0 344020 11159 1471 4241 4356 17412 17412 FLEEGNLEEAEIQK 14 1 0 Unmodified _FLEEGNLEEAEIQK_ 0 0 0 Q9H4L5 Q9H4L5 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.9078 2 824.906867 1647.79918 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.033 1 80.033 79.533 80.533 0 0 0 0 0.0023096 1 47534 77.64 51.702 1 11160 2032 4242 4357 17413 17413 FLEEGNLEEAEIQK 14 1 0 Unmodified _FLEEGNLEEAEIQK_ 0 0 0 Q9H4L5 Q9H4L5 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 825.4097 2 824.906867 1647.79918 NaN NaN NaN 0.36627 0.00030214 NaN NaN NaN NaN 79.133 0.23769 79.133 78.972 79.209 0 0 0 0 0.0052437 1 48069 68.069 49.757 1 NaN NaN 0 4573800 4573800 0 11161 2032 4242 4357 17414 17414 FLEETNCLYAAEGQR 15 0 1 Unmodified _FLEETNCLYAAEGQR_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.9155 2 900.914701 1799.81485 65608.18 0.55817 0.00050286 -0.40692 -0.0003666 0.15125 0.00013627 900.914561875218 906.419989393423 79.255 0.45807 79.255 79.06 79.518 7.6294E-06 96 41 6 0 0 0 1.4588E-05 1 46905 107.18 101.45 1 0.64412 0.64256 0 8721600 5223600 3498100 11162 1718 4243 4358 17415 17415 FLEETNCLYAAEGQR 15 0 1 Unmodified _FLEETNCLYAAEGQR_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 905.9194 2 900.914701 1799.81485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.161 1 79.161 78.661 79.661 0 0 0 0 2.1981E-09 1 46923 107.85 76.975 1 11163 1718 4243 4358 17416 17416 FLEETNCLYAAEGQR 15 0 1 Unmodified _FLEETNCLYAAEGQR_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.92 2 900.914701 1799.81485 64930.82 0.27602 0.00024867 -0.22413 -0.00020192 0.051893 4.6751E-05 901.415824904469 906.420541313458 78.334 0.43771 78.334 78.122 78.56 0 124 37 5 0 0 0 3.0325E-07 3 47409 118.48 118.48 1 0.74617 0.73279 0 14151000 7093600 7057700 11164 1718 4243 4358 17417;17418;17419 17417 FLEETNCLYAAEGQR 15 0 1 Unmodified _FLEETNCLYAAEGQR_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 905.9184 2 900.914701 1799.81485 63560.46 0.53534 0.0004823 -0.3047 -0.00027451 0.23064 0.00020778 901.416181706668 905.918580903891 90.646 0.71195 90.646 90.381 91.093 0 210 41 8 0 0 0 0.00022093 2 50140 65.179 61.858 1 0.87554 0.75104 0 6231300 3326600 2904700 11165 1718 4243 4358 17420;17421 17420 FLEETNCLYAAEGQR 15 0 1 Unmodified _FLEETNCLYAAEGQR_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 906.4202 2 900.914701 1799.81485 63643.35 0.14875 0.00013401 -0.54822 -0.0004939 -0.39947 -0.00035989 900.914655585715 906.420213675641 90.654 0.78529 90.654 90.331 91.116 0 201 44 8 0 0 0 0.00060004 2 49317 65.563 65.563 1 0.9134 0.76104 0 6332900 3238300 3094500 11166 1718 4243 4358 17422;17423 17422 FLEFQYLTGGLVDPEVHGR 19 0 1 Unmodified _FLEFQYLTGGLVDPEVHGR_ 0 0 0 P15924;Q4LE79;B4E2A0 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.3712 3 726.372378 2176.0953 72918.32 0.8837 0.00064189 -0.41436 -0.00030098 0.46933 0.00034091 726.371555681582 730.04280899415 119.63 0.63631 119.63 119.25 119.88 0 169 42 7 0 0 0 0.035206 1 76881 15.984 15.984 1 0.82764 0.82964 0 9077600 4427800 4649800 11167 1486 4244 4359 17424 17424 FLEFQYLTGGLVDPEVHGR 19 0 1 Unmodified _FLEFQYLTGGLVDPEVHGR_ 0 0 0 P15924;Q4LE79;B4E2A0 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.373 3 726.372378 2176.0953 NaN NaN NaN -0.76424 -0.00055512 NaN NaN NaN NaN 118.95 0.43359 118.95 118.7 119.13 0 0 0 0 0.00071585 1 78266 66.777 55.619 1 NaN NaN 0 4430200 4430200 0 11168 1486 4244 4359 17425 17425 FLEGTSCIAGVFVDATK 17 1 0 Unmodified _FLEGTSCIAGVFVDATK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 911.9596 2 907.953294 1813.89204 65372.17 0.71499 0.00064918 0.2863 0.00025995 1.0013 0.00090912 908.454202390427 911.96046546956 117.28 0.38155 117.28 117.15 117.53 -7.6294E-06 78 27 5 0 0 0 0.0012195 2 75000 56.951 56.951 1 2.13 2.165 0 6374700 1849800 4524900 11169 1754 4245 4360 17426;17427 17426 FLEGTSCIAGVFVDATK 17 1 0 Unmodified _FLEGTSCIAGVFVDATK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 911.9601 2 907.953294 1813.89204 64501.64 0.63252 0.0005743 0.44961 0.00040823 1.0821 0.00098252 907.953717019231 911.960610278907 116.79 0.28928 116.79 116.69 116.98 0 55 17 4 0 0 0 0.00013076 1 76591 74.46 74.46 1 1.7256 1.7778 0 9600900 3522100 6078800 11170 1754 4245 4360 17428 17428 FLEHLSGAGK 10 1 0 Unmodified _FLEHLSGAGK_ 0 0 0 Q01813 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.7927 2 529.785099 1057.55564 86297.33 0.464 0.00024582 0.40676 0.0002155 0.87076 0.00046132 529.785293583604 533.792333399595 36.699 0.43181 36.699 36.475 36.907 -3.8147E-06 116 39 4 0 0 0 3.7286E-09 2 18548 125.16 101.81 1 2.1535 2.2408 0 11555000 3348900 8206000 11171 1677 4246 4361 17429;17430 17429 FLENFCHSLQCDNLLSSQPFSSSR 24 0 1 Unmodified _FLENFCHSLQCDNLLSSQPFSSSR_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 962.1068 3 958.437564 2872.29086 62381.54 0.52006 0.00049845 -0.19864 -0.00019039 0.32142 0.00030806 959.106158898073 962.107888966781 122.88 0.36865 122.88 122.69 123.06 0 90 17 8 0 0 0 0.037152 2 73379 12.787 12.787 1 0.97554 0.82584 0 4978800 2719200 2259500 11172 2118 4247 4362 17431;17432 17432 FLENFCHSLQCDNLLSSQPFSSSR 24 0 1 Unmodified _FLENFCHSLQCDNLLSSQPFSSSR_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 959.1068 3 958.437564 2872.29086 62737.85 0.55337 0.00053037 -0.19389 -0.00018583 0.35948 0.00034454 958.771901751629 961.77367229547 122.79 0.38516 122.79 122.59 122.97 -7.6294E-06 89 18 7 0 0 0 0.033693 3 72365 13.896 13.896 1 1.1415 1.0026 0 3606000 1636400 1969600 11173 2118 4247 4362 17433;17434;17435 17434 FLEPTLR 7 0 1 Unmodified _FLEPTLR_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;H7BZ35 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.2538 2 438.252903 874.491253 95205.88 0.0015479 6.7839E-07 0.59982 0.00026287 0.60136 0.00026355 438.253439410066 443.257044742129 68.991 0.8736 68.991 68.603 69.477 0 230 75 5 0 0 0 0.031504 1 40061 67.035 13.481 1 1.7067 1.7427 0 14670000 4210200 10460000 11174 610 4248 4363 17436 17436 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.3888 2 738.888281 1475.76201 NaN NaN NaN 0.094782 7.0034E-05 NaN NaN NaN NaN 61.235 0.59287 61.235 61.035 61.628 0 0 0 0 2.9742E-13 2 34974 123.86 92.786 1 NaN NaN 0 10172000 10172000 0 + 11175 1170 4249 4364 17437;17438 17437 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.8886 2 738.888281 1475.76201 NaN NaN NaN -0.41678 -0.00030795 NaN NaN NaN NaN 62.057 0.71246 62.057 61.641 62.353 0 0 0 0 1.6856E-59 1 35508 185.77 146.62 1 NaN NaN 0 33354000 33354000 0 + 11176 1170 4249 4364 17439 17439 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.8892 2 738.888281 1475.76201 NaN NaN NaN -0.43305 -0.00031997 NaN NaN NaN NaN 63.24 0.78047 63.24 62.904 63.685 0 0 0 0 5.1E-05 1 36175 94.309 70.99 1 NaN NaN 0 22765000 22765000 0 + 11177 1170 4249 4364 17440 17440 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.3905 2 738.888281 1475.76201 NaN NaN NaN 0.023777 1.7569E-05 NaN NaN NaN NaN 64.517 1.0959 64.517 64.127 65.223 0 0 0 0 0.00077256 2 37435 85.355 59.796 1 NaN NaN 0 33237000 33237000 0 + 11178 1170 4249 4364 17441;17442 17442 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.388 2 738.888281 1475.76201 NaN NaN NaN -0.63594 -0.00046989 NaN NaN NaN NaN 60.358 0.32664 60.358 60.173 60.5 0 0 0 0 3.8342E-20 1 35211 138.66 109.19 1 NaN NaN 0 23120000 23120000 0 + 11179 1170 4249 4364 17443 17443 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.8859 2 738.888281 1475.76201 NaN NaN NaN 0.0029201 2.1576E-06 NaN NaN NaN NaN 63.608 1.0466 63.608 63.109 64.155 0 0 0 0 0.0015462 1 37112 76.827 49.498 1 NaN NaN 0 27576000 27576000 0 + 11180 1170 4249 4364 17444 17444 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.3881 2 738.888281 1475.76201 NaN NaN NaN 1.0176 0.0007519 NaN NaN NaN NaN 71.3 0.54087 71.3 71.058 71.599 -7.6294E-06 0 0 0 3.1006E-08 1 37626 109.42 67.44 1 NaN NaN 0 4244600 4244600 0 + 11181 1170 4249 4364 17445 17445 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 738.8902 2 738.888281 1475.76201 NaN NaN NaN 0.37242 0.00027518 NaN NaN NaN NaN 72.812 0.45711 72.812 72.558 73.015 0 0 0 0 0.0085823 1 38478 56.432 27.345 1 NaN NaN 0 1513300 1513300 0 + 11182 1170 4249 4364 17446 17446 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 738.8874 2 738.888281 1475.76201 NaN NaN NaN -0.36247 -0.00026782 NaN NaN NaN NaN 74.183 0.75967 74.183 73.841 74.601 0 0 0 0 4.7023E-13 2 39328 119.75 78.299 1 NaN NaN 0 3052400 3052400 0 + 11183 1170 4249 4364 17447;17448 17448 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.8886 2 738.888281 1475.76201 NaN NaN NaN 0.80881 0.00059762 NaN NaN NaN NaN 71.878 0.43303 71.878 71.653 72.086 -7.6294E-06 0 0 0 1.9314E-20 1 37164 141.1 116.94 1 NaN NaN 0 2066100 2066100 0 + 11184 1170 4249 4364 17449 17449 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.8893 2 738.888281 1475.76201 NaN NaN NaN -0.18254 -0.00013487 NaN NaN NaN NaN 73.353 0.50465 73.353 73.102 73.606 0 0 0 0 0.0056521 1 37998 61.765 42.494 1 NaN NaN 0 1686900 1686900 0 + 11185 1170 4249 4364 17450 17450 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.8878 2 738.888281 1475.76201 NaN NaN NaN -0.080179 -5.9244E-05 NaN NaN NaN NaN 74.659 0.73704 74.659 74.291 75.029 0 0 0 0 7.5496E-07 2 38833 105.52 71.271 1 NaN NaN 0 3371500 3371500 0 + 11186 1170 4249 4364 17451;17452 17452 FLEQQNQVLETK 12 1 0 Unmodified _FLEQQNQVLETK_ 0 0 0 CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46 CON__Q7RTS7 CON__Q7RTS7 KRT74;KRT73 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.8887 2 738.888281 1475.76201 NaN NaN NaN -0.4843 -0.00035784 NaN NaN NaN NaN 77.338 0.48921 77.338 77.18 77.67 0 0 0 0 0.0085823 1 40589 56.432 30.048 1 NaN NaN 0 1201300 1201300 0 + 11187 1170 4249 4364 17453 17453 FLEQQNQVLQTK 12 1 0 Unmodified _FLEQQNQVLQTK_ 0 0 0 CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;Q0IIN1;CON__Q7Z794;Q7Z794;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P35908;H6VRG3;H6VRG2 H6VRG3 KRT2;KRT77;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3959 2 738.396273 1474.77799 NaN NaN NaN -0.23457 -0.00017321 NaN NaN NaN NaN 59.113 1.8343 59.113 58.874 60.709 0 0 0 0 7.3671E-141 3 34037 253.88 217.93 1 NaN NaN 0 1044500000 1044500000 0 + 11188 1308;1309;1166 4250 4365 17454;17455;17456 17455 FLEQQNQVLQTK 12 1 0 Unmodified _FLEQQNQVLQTK_ 0 0 0 CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;Q0IIN1;CON__Q7Z794;Q7Z794;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P35908;H6VRG3;H6VRG2 H6VRG3 KRT2;KRT77;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3986 2 738.396273 1474.77799 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.755 1 62.755 62.255 63.255 3.8147E-06 0 0 0 0.00013179 1 36035 88.681 61.352 1 + 11189 1308;1309;1166 4250 4365 17457 17457 FLEQQNQVLQTK 12 1 0 Unmodified _FLEQQNQVLQTK_ 0 0 0 CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;Q0IIN1;CON__Q7Z794;Q7Z794;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P35908;H6VRG3;H6VRG2 H6VRG3 KRT2;KRT77;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3962 2 738.396273 1474.77799 NaN NaN NaN -0.29947 -0.00022112 NaN NaN NaN NaN 58.13 2.7719 58.13 57.861 60.633 3.8147E-06 0 0 0 1.5312E-103 4 34124 227.81 184.3 1 NaN NaN 0 1266600000 1266600000 0 + 11190 1308;1309;1166 4250 4365 17458;17459;17460;17461 17459 FLEQQNQVLQTK 12 1 0 Unmodified _FLEQQNQVLQTK_ 0 0 0 CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;Q0IIN1;CON__Q7Z794;Q7Z794;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P35908;H6VRG3;H6VRG2 H6VRG3 KRT2;KRT77;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3983 2 738.396273 1474.77799 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.792 1 61.792 61.292 62.292 -3.8147E-06 0 0 0 1.1836E-10 1 36218 112.75 84.35 1 + 11191 1308;1309;1166 4250 4365 17462 17462 FLEQQNQVLQTK 12 1 0 Unmodified _FLEQQNQVLQTK_ 0 0 0 CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;Q0IIN1;CON__Q7Z794;Q7Z794;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P35908;H6VRG3;H6VRG2 H6VRG3 KRT2;KRT77;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.3964 2 738.396273 1474.77799 NaN NaN NaN -0.29621 -0.00021872 NaN NaN NaN NaN 69.189 3.386 69.189 68.79 72.176 0 0 0 0 3.3324E-28 5 35278 145.99 125.29 1 NaN NaN 0 246650000 246650000 0 + 11192 1308;1309;1166 4250 4365 17463;17464;17465;17466;17467 17463 FLEQQNQVLQTK 12 1 0 Unmodified _FLEQQNQVLQTK_ 0 0 0 CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;Q0IIN1;CON__Q7Z794;Q7Z794;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P35908;H6VRG3;H6VRG2 H6VRG3 KRT2;KRT77;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.9001 2 738.396273 1474.77799 NaN NaN NaN -0.2228 -0.00016452 NaN NaN NaN NaN 76.012 0.73955 76.012 75.584 76.323 0 0 0 0 0.0078387 1 39543 57.785 41.561 1 NaN NaN 0 842840 842840 0 + 11193 1308;1309;1166 4250 4365 17468 17468 FLEQSMDIEDLK 12 1 0 Oxidation (M) _FLEQSM(ox)DIEDLK_ FLEQSM(1)DIEDLK FLEQSM(141.95)DIEDLK 0 1 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.3605 2 742.352882 1482.69121 70847.26 0.80877 0.00060039 -0.062536 -4.6424E-05 0.74623 0.00055397 742.352791886613 746.359915806287 79.763 0.68587 79.763 79.508 80.194 0 344 59 8 0 0 0 3.9257E-18 2 47297 141.95 131.43 1 1.0172 1.1086 0 49717000 24424000 25294000 11194 1803 4251 4366 17469;17470 17469 1667 FLEQSMDIEDLK 12 1 0 Oxidation (M) _FLEQSM(ox)DIEDLK_ FLEQSM(1)DIEDLK FLEQSM(141.88)DIEDLK 0 1 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.354 2 742.352882 1482.69121 69728.02 0.8327 0.00061816 0.085579 6.3529E-05 0.91828 0.00068169 742.352940550075 746.360065711037 78.85 0.83743 78.85 78.548 79.385 0 390 73 8 0 0 0 3.9601E-18 3 47780 141.88 119.79 1 1.0002 1.1282 0 62881000 27104000 35777000 11195 1803 4251 4366 17471;17472;17473 17472 1667 FLEQSMDIEDLK 12 1 0 Oxidation (M) _FLEQSM(ox)DIEDLK_ FLEQSM(1)DIEDLK FLEQSM(76.14)DIEDLK 0 1 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.354 2 742.352882 1482.69121 69985.91 0.94179 0.00069914 -0.1121 -8.3215E-05 0.82969 0.00061593 742.352823636304 746.359765890447 91.225 0.99647 91.225 90.897 91.893 0 289 68 8 0 0 0 9.0664E-05 2 50585 82.261 74.615 1 1.2243 0.98208 0 7560900 3172900 4388000 11196 1803 4251 4366 17474;17475 17475 1667 FLEQSMDIEDLK 12 1 0 Oxidation (M) _FLEQSM(ox)DIEDLK_ FLEQSM(1)DIEDLK FLEQSM(63.62)DIEDLK 0 1 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 746.3609 2 742.352882 1482.69121 70175.93 0.60459 0.00044882 -0.059065 -4.3847E-05 0.54552 0.00040497 742.35282732276 746.359854768785 91.178 0.94652 91.178 90.883 91.829 0 267 63 7 0 0 0 0.00045296 2 49733 63.624 63.624 1 1.1552 0.93988 0 7044200 3059400 3984800 11197 1803 4251 4366 17476;17477 17476 1667 FLESLPEEEQQR 12 0 1 Unmodified _FLESLPEEEQQR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.8727 2 752.867545 1503.72054 70557.06 0.36179 0.00027238 0.076678 5.7728E-05 0.43847 0.00033011 752.86755462133 757.871802701817 69.593 1.2784 69.593 69.275 70.554 0 593 108 9 0 0 0 1.2247E-12 4 40326 129.85 129.85 1 0.65748 0.77712 0 255490000 152890000 102600000 11198 1244 4252 4367 17478;17479;17480;17481 17478 FLESLPEEEQQR 12 0 1 Unmodified _FLESLPEEEQQR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.3732 2 752.867545 1503.72054 70246.32 0.60781 0.0004576 -0.0057569 -4.3342E-06 0.60205 0.00045326 752.867536837436 757.871695799333 68.395 1.4832 68.395 68.175 69.658 0 647 123 8 0 0 0 1.0572E-05 4 40520 107.79 107.79 1 0.65818 0.75848 0 224780000 131450000 93325000 11199 1244 4252 4367 17482;17483;17484;17485 17482 FLESLPEEEQQR 12 0 1 Unmodified _FLESLPEEEQQR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.8723 2 752.867545 1503.72054 69272.67 0.56618 0.00042626 0.019279 1.4514E-05 0.58546 0.00044077 752.867625848294 757.871624868207 79.634 1.8676 79.634 79.005 80.872 0 648 110 11 0 0 0 2.3719E-05 4 43208 101.66 101.66 1 1.3702 1.1813 0 70653000 30320000 40333000 11200 1244 4252 4367 17486;17487;17488;17489 17487 FLESLPEEEQQR 12 0 1 Unmodified _FLESLPEEEQQR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.8725 2 752.867545 1503.72054 69713.86 0.42047 0.00031656 0.066158 4.9809E-05 0.48663 0.00036637 752.867708927705 757.871658517212 79.909 2.4433 79.909 79.445 81.888 0 683 150 10 0 0 0 0.00018714 4 42103 76.143 76.143 1 1.391 1.2138 0 63131000 26479000 36652000 11201 1244 4252 4367 17490;17491;17492;17493 17491 FLESTDSFNNELK 13 1 0 Unmodified _FLESTDSFNNELK_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;J3QKS7;H7C048 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.3745 2 772.367378 1542.7202 69060.23 0.60022 0.00046359 -0.11026 -8.5161E-05 0.48997 0.00037843 772.868889096354 776.875828944053 81.599 0.67168 81.599 81.294 81.966 0 206 58 5 0 0 0 0.00026518 1 48825 67.334 67.334 1 0.79409 0.83867 0 31002000 17263000 13739000 11202 86 4253 4368 17494 17494 FLESTDSFNNELK 13 1 0 Unmodified _FLESTDSFNNELK_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;J3QKS7;H7C048 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.3699 2 772.367378 1542.7202 69502.77 0.63162 0.00048785 0.033805 2.611E-05 0.66543 0.00051396 772.367086486234 776.374223205586 80.685 0.94877 80.685 80.22 81.169 0 269 78 7 0 0 0 0.00079839 1 49082 60.434 60.434 1 0.76376 0.84014 0 42478000 24940000 17538000 11203 86 4253 4368 17495 17495 FLESTDSFNNELK 13 1 0 Unmodified _FLESTDSFNNELK_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;J3QKS7;H7C048 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.374 2 772.367378 1542.7202 68770.43 0.75313 0.0005817 -0.030949 -2.3904E-05 0.72219 0.00055779 772.36734876501 776.374537090694 93.36 0.57915 93.36 93.108 93.687 0 161 35 6 0 0 0 0.001556 1 52038 57.348 53.331 1 1.1939 0.92974 0 3729500 1690700 2038800 11204 86 4253 4368 17496 17496 FLESTDSFNNELK 13 1 0 Unmodified _FLESTDSFNNELK_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;J3QKS7;H7C048 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.3773 2 772.367378 1542.7202 68417.09 0.63542 0.00049078 -0.22787 -0.000176 0.40755 0.00031478 772.366982102085 776.374359410637 93.352 0.63524 93.352 92.967 93.603 0 143 38 5 0 0 0 0.010686 3 51166 41.399 41.399 1 1.1767 0.92292 0 3802100 2005800 1796300 11205 86 4253 4368 17497;17498;17499 17498 FLETVELQISLK 12 1 0 Unmodified _FLETVELQISLK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.4164 2 710.408317 1418.80208 73193.48 0.84047 0.00059708 0.20618 0.00014647 1.0466 0.00074355 710.910013315543 714.4152462001 115.9 0.42742 115.9 115.67 116.09 7.6294E-06 87 28 5 0 0 0 2.6269E-05 2 75715 100.48 94.936 1 1.0668 1.1063 0 18784000 9053900 9730500 11206 1651 4254 4369 17500;17501 17501 FLETVELQISLK 12 1 0 Unmodified _FLETVELQISLK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.4161 2 710.408317 1418.80208 73146.29 0.99706 0.00070832 -0.28227 -0.00020053 0.71479 0.0005078 710.407941187794 714.415097161676 127.82 0.56082 127.82 127.65 128.21 0 77 21 5 0 0 0 0.0098235 2 77120 46.844 44.8 1 0.93167 0.73872 0 4331400 1902400 2429000 11207 1651 4254 4369 17502;17503 17502 FLEVQYLTGGLIEPDTPGR 19 0 1 Unmodified _FLEVQYLTGGLIEPDTPGR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1058.5558 2 1053.04931 2104.08407 59742.82 0.58124 0.00061207 -0.14398 -0.00015162 0.43725 0.00046045 1053.55233221017 1058.55428778997 124.06 0.67725 124.06 123.82 124.49 0 259 46 10 0 0 0 1.2909E-39 2 80459 154.65 154.65 1 1.7726 1.821 0 25483000 9138600 16344000 11208 1754 4255 4370 17504;17505 17505 FLEVQYLTGGLIEPDTPGR 19 0 1 Unmodified _FLEVQYLTGGLIEPDTPGR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1053.0472 2 1053.04931 2104.08407 58590.43 0.74007 0.00077933 -0.059702 -6.287E-05 0.68037 0.00071646 1053.55249816266 1058.55446179943 123.7 0.55878 123.7 123.47 124.03 7.6294E-06 257 39 9 0 0 0 1.9748E-12 2 82126 109.84 109.84 1 1.7893 1.9592 0 32386000 11155000 21231000 11209 1754 4255 4370 17506;17507 17507 FLEVQYLTGGLIEPDTPGRVPLDEALQR 28 0 2 Unmodified _FLEVQYLTGGLIEPDTPGRVPLDEALQR_ 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1043.2212 3 1042.88718 3125.63971 61480.52 0.87388 0.00091136 -0.092516 -9.6483E-05 0.78136 0.00081488 1043.22134781031 1049.89351845566 126.48 0.58469 126.48 126.25 126.84 0 124 35 5 0 0 0 1.0926E-07 2 84432 48.867 48.867 1 1.4362 1.4448 0 9786700 3635000 6151700 11210 1754 4256 4371 17508;17509 17508 FLFDSVSSQNVGLR 14 0 1 Unmodified _FLFDSVSSQNVGLR_ 0 0 0 A0A024RDY0;H0Y8C6;O00410;C9JMV5;E7ETV3;H0Y3V4 A0A024RDY0 A0A024RDY0 RANBP5;IPO5 Importin-5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.9119 2 784.907005 1567.79946 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.3 1 106.3 105.8 106.8 0 0 0 0 0.014886 1 67666 47.559 17.305 1 11211 394 4257 4372 17510 17510 FLFSLFGQK 9 1 0 Unmodified _FLFSLFGQK_ 0 0 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.8097 2 543.80276 1085.59097 82101.88 0.8804 0.00047876 -0.58691 -0.00031916 0.29349 0.0001596 543.802504965999 547.809306321838 120.55 0.73031 120.55 120.24 120.97 7.6294E-06 210 51 6 0 0 0 0.0059982 1 77610 74.127 74.127 1 1.5307 1.6224 0 16179000 5951600 10227000 11212 32 4258 4373 17511 17511 FLFSLFGQK 9 1 0 Unmodified _FLFSLFGQK_ 0 0 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.8024 2 543.80276 1085.59097 83260.64 0.86886 0.00047249 -0.46062 -0.00025049 0.40824 0.000222 543.802515738125 547.809313455064 119.96 0.68663 119.96 119.67 120.35 0 218 49 6 0 0 0 0.0066845 2 79040 74.255 74.255 1 1.5441 1.5802 0 17461000 6417400 11043000 11213 32 4258 4373 17512;17513 17512 FLFSLFGQK 9 1 0 Unmodified _FLFSLFGQK_ 0 0 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.8027 2 543.80276 1085.59097 84352.95 1.1388 0.00061926 -0.21397 -0.00011636 0.92479 0.0005029 543.802546038917 547.809707458216 132.51 0.57274 132.51 132.31 132.89 0 90 25 6 0 0 0 0.050765 1 80544 37.727 37.727 1 0.9578 0.80537 0 1592600 818900 773740 11214 32 4258 4373 17514 17514 FLGAVAMDLGIDK 13 1 0 Oxidation (M) _FLGAVAM(ox)DLGIDK_ FLGAVAM(1)DLGIDK FLGAVAM(55.81)DLGIDK 0 1 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.365 2 683.35777 1364.70099 NaN NaN NaN 0.30044 0.00020531 NaN NaN NaN NaN 106.36 0.52235 106.36 106.22 106.74 0 0 0 0 0.001851 1 66127 55.806 42.037 1 NaN NaN 0 9035800 0 9035800 11215 1412 4259 4374 17515 17515 1102 FLGDIEVWDQAEK 13 1 0 Unmodified _FLGDIEVWDQAEK_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.3884 2 775.380288 1548.74602 74417.21 1.2382 0.00096007 0.8954 0.00069428 2.1336 0.0016544 775.380769476091 779.388588169428 108.66 0.28831 108.66 108.49 108.78 0 59 20 4 0 0 0 0.00013532 2 67849 80.763 65.498 1 2.2405 2.2775 0 6409600 2156100 4253500 11216 892 4260 4375 17516;17517 17516 FLGDIEVWDQAEK 13 1 0 Unmodified _FLGDIEVWDQAEK_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.39 2 775.380288 1548.74602 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.01 1 108.01 107.51 108.51 0 0 0 0 0.00055539 1 69044 83.397 65.532 1 11217 892 4260 4375 17518 17518 FLGLLYELEENTDK 14 1 0 Unmodified _FLGLLYELEENTDK_ 0 0 0 P49792;D3DX73 P49792 P49792 RANBP2;hCG_1994636 E3 SUMO-protein ligase RanBP2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.4273 2 842.427435 1682.84032 NaN NaN NaN -0.4797 -0.00040411 NaN NaN NaN NaN 124.78 0.41307 124.78 124.55 124.97 7.6294E-06 0 0 0 0.019934 1 83034 45.359 35.927 1 NaN NaN 0 2140600 2140600 0 11218 1588 4261 4376 17519 17519 FLGPEDSHVVVASNSPCLK 19 1 0 Unmodified _FLGPEDSHVVVASNSPCLK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.0166 3 686.010452 2055.00953 72699.47 0.49786 0.00034154 -0.12752 -8.748E-05 0.37034 0.00025406 686.344559933672 688.681794444769 78.532 0.79655 78.532 78.111 78.907 0 400 69 9 0 0 0 5.4128E-06 4 46414 64.298 64.298 1 0.8549 0.96319 0 74901000 42090000 32810000 11219 1698;436 4262 4377 17520;17521;17522;17523 17522 FLGPEDSHVVVASNSPCLK 19 1 0 Unmodified _FLGPEDSHVVVASNSPCLK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.0165 3 686.010452 2055.00953 73195.41 0.72388 0.00049659 -0.20743 -0.0001423 0.51645 0.00035429 686.010297997035 689.016035113335 77.436 0.87088 77.436 77.007 77.878 0 383 71 10 0 0 0 4.1985E-06 2 46736 69.081 69.081 1 0.86428 0.96907 0 79008000 42528000 36480000 11220 1698;436 4262 4377 17524;17525 17525 FLGPEDSHVVVASNSPCLK 19 1 0 Unmodified _FLGPEDSHVVVASNSPCLK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.0168 3 686.010452 2055.00953 72107.39 0.51264 0.00035167 0.090653 6.2189E-05 0.60329 0.00041386 686.010519008256 688.681984766873 89.776 1.1079 89.776 89.471 90.579 7.6294E-06 414 75 10 0 0 0 0.0013708 2 49569 32.565 32.565 1 1.2221 0.96884 0 18737000 8047900 10689000 11221 1698;436 4262 4377 17526;17527 17526 FLGPEDSHVVVASNSPCLK 19 1 0 Unmodified _FLGPEDSHVVVASNSPCLK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.3445 3 686.010452 2055.00953 72310.12 0.33651 0.00023085 0.18777 0.00012881 0.52428 0.00035966 686.345197464034 689.016267819993 89.597 0.91624 89.597 89.258 90.174 0 368 59 9 0 0 0 0.0020359 2 48706 30.094 30.094 1 1.2246 0.98399 0 16228000 7692900 8535500 11222 1698;436 4262 4377 17528;17529 17529 FLGQILTAFPALR 13 0 1 Unmodified _FLGQILTAFPALR_ 0 0 0 Q9HBB9;Q8WUM5 Q9HBB9 Q9HBB9 GEMIN4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8797 2 723.927012 1445.83947 80703.13 1.1225 0.00081261 0.1862 0.00013479 1.3087 0.00094741 723.927113378758 728.930638322008 131.28 0.4234 131.28 131.03 131.46 1.5259E-05 56 28 4 0 0 0 0.0094957 1 85692 42.743 42.743 1 1.4178 1.5291 0 2813400 1402200 1411200 11223 1940 4263 4378 17530 17530 FLGQILTAFPALR 13 0 1 Unmodified _FLGQILTAFPALR_ 0 0 0 Q9HBB9;Q8WUM5 Q9HBB9 Q9HBB9 GEMIN4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.9309 2 723.927012 1445.83947 NaN NaN NaN 0.60415 0.00043736 NaN NaN NaN NaN 130.87 0.38383 130.87 130.63 131.01 0 0 0 0 1.0167E-05 2 87422 98.249 77.919 1 NaN NaN 0 2082800 0 2082800 11224 1940 4263 4378 17531;17532 17531 FLGTSGQNVSDIFR 14 0 1 Unmodified _FLGTSGQNVSDIFR_ 0 0 0 H7C1B3;B4DP28;F8W8R3;A0A087WWF6;P49005 H7C1B3 H7C1B3 POLD2 DNA polymerase delta subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.4006 2 770.891355 1539.76816 70363.37 0.76645 0.00059085 0.36115 0.0002784 1.1276 0.00086925 770.891605212486 775.895327246464 101.52 0.43584 101.52 101.34 101.77 -7.6294E-06 86 33 4 0 0 0 0.00016878 1 62450 73.781 45.768 1 1.4022 1.4579 0 5436600 2457300 2979300 11225 425 4264 4379 17533 17533 FLHCTEK 7 1 0 Unmodified _FLHCTEK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.7263 2 467.726195 933.437837 88346.09 0.070904 3.3164E-05 0.075512 3.5319E-05 0.14642 6.8483E-05 467.726218470128 471.733291276365 17.791 0.29184 17.791 17.683 17.975 0 34 10 6 0 0 0 0.010107 1 4883 119.56 92.436 1 1.0049 0.98503 0 20916000 10692000 10224000 11226 1411 4265 4380 17534 17534 FLHSEALLAVAQNR 14 0 1 Unmodified _FLHSEALLAVAQNR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.9594 3 523.622968 1567.84708 83414.23 0.63432 0.00033215 0.15201 7.9595E-05 0.78633 0.00041174 523.622844773764 526.959231098286 85.118 0.67467 85.118 84.593 85.267 0 165 55 5 0 0 0 0.0013052 2 51096 45.79 41.242 1 0.76927 0.78743 0 26235000 15513000 10722000 11227 809 4266 4381 17535;17536 17535 FLHSEALLAVAQNR 14 0 1 Unmodified _FLHSEALLAVAQNR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.623 3 523.622968 1567.84708 83682.63 0.47558 0.00024903 0.12159 6.3666E-05 0.59717 0.00031269 523.622925281927 526.959038813815 85.745 0.3652 85.745 85.519 85.884 -7.6294E-06 73 30 4 0 0 0 0.0023557 1 51518 40.025 40.025 1 0.95138 0.94739 0 8589700 3177300 5412300 11228 809 4266 4381 17537 17537 FLHSEALLAVAQNR 14 0 1 Unmodified _FLHSEALLAVAQNR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.6143 3 523.622968 1567.84708 83682.63 0.40302 0.00021103 0.060627 3.1746E-05 0.46364 0.00024277 523.957386243476 526.959074442174 85.944 0.40733 85.944 85.801 86.208 -7.6294E-06 68 34 4 0 0 0 0.034977 1 51698 23.362 23.362 1 0.63337 0.65919 0 13460000 7164600 6295100 11229 809 4266 4381 17538 17538 FLHSEALLAVAQNR 14 0 1 Unmodified _FLHSEALLAVAQNR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.9592 3 523.622968 1567.84708 83295.63 0.48051 0.00025161 -0.16558 -8.6703E-05 0.31493 0.0001649 523.622928355264 526.958880442174 95.782 0.90582 95.782 95.508 96.414 0 320 60 8 0 0 0 0.00029535 2 53658 57.106 57.106 1 1.1931 0.97281 0 15060000 6818800 8241600 11230 809 4266 4381 17539;17540 17539 FLHSEALLAVAQNR 14 0 1 Unmodified _FLHSEALLAVAQNR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.9363 2 784.930814 1567.84708 70750.48 0.80759 0.0006339 -0.15717 -0.00012337 0.65042 0.00051053 784.930347911654 789.935073654682 95.785 0.43397 95.785 95.607 96.041 0 100 30 6 0 0 0 0.0047273 1 53670 57.203 57.203 1 1.3113 1.1004 0 3136200 1488800 1647400 11231 809 4266 4381 17541 17541 FLHSEALLAVAQNR 14 0 1 Unmodified _FLHSEALLAVAQNR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 526.9596 3 523.622968 1567.84708 83793.66 0.25359 0.00013279 -0.057666 -3.0195E-05 0.19593 0.00010259 523.62296817896 526.958955471565 95.426 0.90626 95.426 95.191 96.097 0 276 61 8 0 0 0 7.1316E-05 2 52674 64.827 64.827 1 1.1627 0.95774 0 8410600 3403600 5007000 11232 809 4266 4381 17542;17543 17542 FLICTDVAAR 10 0 1 Unmodified _FLICTDVAAR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.3099 2 583.305341 1164.59613 NaN NaN NaN 0.055109 3.2145E-05 NaN NaN NaN NaN 82.644 0.44955 82.644 82.433 82.883 0 0 0 0 0.0067484 1 49534 66.692 39.438 1 NaN NaN 0 13361000 0 13361000 11233 452 4267 4382 17544 17544 FLICTDVAAR 10 0 1 Unmodified _FLICTDVAAR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.309 2 583.305341 1164.59613 NaN NaN NaN 0.023432 1.3668E-05 NaN NaN NaN NaN 81.649 0.56149 81.649 81.36 81.921 0 0 0 0 0.00057853 1 49902 90.657 57.816 1 NaN NaN 0 14728000 0 14728000 11234 452 4267 4382 17545 17545 FLIDNGVSLDSFSQAAAER 19 0 1 Unmodified _FLIDNGVSLDSFSQAAAER_ 0 0 0 Q9Y4C8;A0A024RBL4 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1025.5104 2 1020.50527 2038.99598 NaN NaN NaN 0.8117 0.00082835 NaN NaN NaN NaN 116.23 0.22608 116.23 116.14 116.37 7.6294E-06 0 0 0 0.01062 1 74191 40.066 34.343 1 NaN NaN 0 2708500 0 2708500 11235 2145 4268 4383 17546 17546 FLILPDMLK 9 1 0 Oxidation (M) _FLILPDM(ox)LK_ FLILPDM(1)LK FLILPDM(63.48)LK 0 1 0 P62318 P62318 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.3203 2 553.319928 1104.6253 81686.93 0.7894 0.00043679 0.044171 2.444E-05 0.83357 0.00046123 553.319841272398 557.326952919021 110.13 0.68176 110.13 109.86 110.54 0 197 47 6 0 0 0 0.0032548 2 68993 63.48 63.48 1 1.6085 1.7454 0 45574000 15609000 29965000 11236 1646 4269 4384 17547;17548 17548 1427 FLILPDMLK 9 1 0 Oxidation (M) _FLILPDM(ox)LK_ FLILPDM(1)LK FLILPDM(71.5)LK 0 1 0 P62318 P62318 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.3206 2 553.319928 1104.6253 81838.73 0.57558 0.00031848 -0.057693 -3.1923E-05 0.51789 0.00028656 553.319893524257 557.326871572548 109.47 0.66415 109.47 109.17 109.84 0 195 44 6 0 0 0 0.001722 4 70211 71.501 71.501 1 1.5855 1.6104 0 29965000 9400100 20565000 11237 1646 4269 4384 17549;17550;17551;17552 17552 1427 FLILPDMLK 9 1 0 Oxidation (M) _FLILPDM(ox)LK_ FLILPDM(1)LK FLILPDM(54.61)LK 0 1 0 P62318 P62318 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.3217 2 553.319928 1104.6253 82013.7 0.65261 0.0003611 0.11659 6.4512E-05 0.7692 0.00042561 553.319947699362 557.327070044142 121.18 0.39282 121.18 121.01 121.4 7.6294E-06 66 17 5 0 0 0 0.0075653 1 72085 54.611 54.611 1 0.4927 0.39027 0 4199300 2989600 1209700 11238 1646 4269 4384 17553 17553 1427 FLILPDMLK 9 1 0 Oxidation (M) _FLILPDM(ox)LK_ FLILPDM(1)LK FLILPDM(47.08)LK 0 1 0 P62318 P62318 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.3204 2 553.319928 1104.6253 82094.06 0.7258 0.0004016 -0.065731 -3.637E-05 0.66007 0.00036523 553.319825358042 557.326860936856 120.94 0.4781 120.94 120.69 121.17 0 85 20 6 0 0 0 0.013268 1 71022 47.082 47.082 1 0.58119 0.46924 0 2550100 1793200 756920 11239 1646 4269 4384 17554 17554 1427 FLILPDMLK 9 1 0 Unmodified _FLILPDMLK_ 0 0 0 P62318 P62318 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.3297 2 545.322471 1088.63039 85259.94 0.80729 0.00044023 0.011937 6.5094E-06 0.81923 0.00044674 545.322478433491 549.329358151055 122.97 0.47286 122.97 122.78 123.25 0 110 36 4 0 0 0 0.0073059 2 79689 62.107 48.528 1 0.88191 0.88699 0 4970600 3103000 1867600 11240 1646 4269 4385 17555;17556 17556 FLILPDMLK 9 1 0 Unmodified _FLILPDMLK_ 0 0 0 P62318 P62318 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.33 2 545.322471 1088.63039 85380.48 0.64677 0.0003527 -0.039088 -2.1315E-05 0.60768 0.00033138 545.322487699203 549.32948043043 122.4 0.48853 122.4 122.18 122.67 -7.6294E-06 109 38 4 0 0 0 0.013178 2 81182 56.81 45.544 1 0.87358 0.87748 0 6987100 3316100 3671000 11241 1646 4269 4385 17557;17558 17558 FLILPDMLK 9 1 0 Unmodified _FLILPDMLK_ 0 0 0 P62318 P62318 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.3297 2 545.322471 1088.63039 84999.36 0.61495 0.00033535 -0.32258 -0.00017591 0.29238 0.00015944 545.322158641556 549.329200375822 134.46 0.19579 134.46 134.36 134.56 -1.5259E-05 21 6 6 0 0 0 0.045032 2 81209 40.021 36.76 1 1.4328 1.169 0 6124600 2633900 3490600 11242 1646 4269 4385 17559;17560 17559 FLILQGEVEQIAMMK 15 1 0 2 Oxidation (M) _FLILQGEVEQIAM(ox)M(ox)K_ FLILQGEVEQIAM(1)M(1)K FLILQGEVEQIAM(115.33)M(115.33)K 0 2 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 891.4631 2 891.462441 1780.91033 62869.84 0.6335 0.00056474 0.26165 0.00023325 0.89515 0.00079799 891.462345509316 895.470232492285 114.69 1.1293 114.69 114.11 115.24 0 467 76 8 0 0 0 4.5763E-10 2 72587 115.33 115.33 1 1.3072 1.3905 0 31744000 13192000 18553000 11243 2070 4270 4386 17561;17562 17562 1899;1900 FLILQGEVEQIAMMK 15 1 0 2 Oxidation (M) _FLILQGEVEQIAM(ox)M(ox)K_ FLILQGEVEQIAM(1)M(1)K FLILQGEVEQIAM(100.72)M(100.72)K 0 2 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 891.4647 2 891.462441 1780.91033 63173.38 0.6099 0.0005437 0.22451 0.00020014 0.8344 0.00074384 891.462621412218 895.470095916877 114.13 1.0967 114.13 113.56 114.66 7.6294E-06 456 76 8 0 0 0 6.9895E-07 3 73927 100.72 91.533 1 1.3367 1.4609 0 40429000 15973000 24456000 11244 2070 4270 4386 17563;17564;17565 17565 1899;1900 FLILQGEVEQIAMMKPK 17 2 0 2 Oxidation (M) _FLILQGEVEQIAM(ox)M(ox)KPK_ FLILQGEVEQIAM(1)M(1)KPK FLILQGEVEQIAM(78.93)M(78.93)KPK 0 2 1 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.0366 3 669.693295 2006.05806 75764.09 0.75833 0.00050785 -0.03054 -2.0452E-05 0.72779 0.00048739 670.027327479197 675.371006681979 104.9 0.66194 104.9 104.49 105.15 0 107 52 5 0 0 0 1.6577E-05 1 66540 78.932 78.932 1 1.459 1.6651 0 12777000 4804500 7972200 11245 2070 4271 4387 17566 17566 1899;1900 FLIQNVLR 8 0 1 Unmodified _FLIQNVLR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.8121 2 501.808377 1001.6022 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.586 1 99.586 99.086 100.09 0 0 0 0 0.021408 1 60977 67.035 18.861 1 11246 1561 4272 4388 17567 17567 FLIVAHDDGR 10 0 1 Unmodified _FLIVAHDDGR_ 0 0 0 B3KTA3;Q16658 B3KTA3 B3KTA3 FSCN1 Fascin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 384.8726 3 381.536612 1141.58801 NaN NaN NaN 0.048094 1.835E-05 NaN NaN NaN NaN 48.674 0.48976 48.674 48.404 48.894 3.8147E-06 0 0 0 0.028948 1 26518 39.148 32.02 1 NaN NaN 0 14000000 0 14000000 11247 942 4273 4389 17568 17568 FLLEGQVFR 9 0 1 Unmodified _FLLEGQVFR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.8159 2 554.811116 1107.60768 82992.6 0.75274 0.00041763 0.038573 2.1401E-05 0.79132 0.00043903 554.811341371086 559.815094849406 101.21 0.63747 101.21 100.91 101.55 0 148 49 5 0 0 0 0.0074668 2 62146 61.962 36.226 1 0.95414 0.95181 0 8719400 2787500 5931900 11248 1897 4274 4390 17569;17570 17569 FLLEGQVFR 9 0 1 Unmodified _FLLEGQVFR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.8116 2 554.811116 1107.60768 80692.56 0.65173 0.00036159 -0.34126 -0.00018933 0.31047 0.00017225 554.811425843064 559.815143229657 100.31 0.54504 100.31 100.01 100.55 0 136 45 4 0 0 0 0.0069772 2 63008 60.589 41.102 1 1.0694 1.0925 0 20788000 13421000 7367400 11249 1897 4274 4390 17571;17572 17572 FLLEGQVFR 9 0 1 Unmodified _FLLEGQVFR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.8121 2 554.811116 1107.60768 81937.92 0.67259 0.00037316 0.90744 0.00050346 1.58 0.00087662 554.811918344309 559.815528029001 113.04 1.0336 113.04 112.56 113.59 7.6294E-06 131 49 5 0 0 0 0.063364 1 64836 41.029 23.643 1 1.1652 1.0003 0 2812800 1307900 1504900 11250 1897 4274 4390 17573 17573 FLLEHFTDEQR 11 0 1 Unmodified _FLLEHFTDEQR_ 0 0 0 P42695;Q96FA6;E9PLE0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.2404 3 478.905253 1433.69393 87973.36 -0.028791 -1.3788E-05 0.10106 4.8397E-05 0.072267 3.4609E-05 479.239608545013 482.241120944998 77.197 0.86192 77.197 76.828 77.69 0 186 72 5 0 0 0 0.0095931 1 45482 37.968 31.491 1 0.92711 0.97362 0 11783000 5067900 6715100 11251 1565 4275 4391 17574 17574 FLLEHFTDEQR 11 0 1 Unmodified _FLLEHFTDEQR_ 0 0 0 P42695;Q96FA6;E9PLE0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2413 3 478.905253 1433.69393 87186.49 0.091836 4.3981E-05 0.0079172 3.7916E-06 0.099753 4.7772E-05 478.90530155814 482.241230419789 75.57 0.77327 75.57 75.264 76.037 0 289 70 6 0 0 0 0.00061224 1 45500 54.7 51.62 1 0.84513 0.91639 0 27778000 11893000 15885000 11252 1565 4275 4391 17575 17575 FLLEHFTDEQR 11 0 1 Unmodified _FLLEHFTDEQR_ 0 0 0 P42695;Q96FA6;E9PLE0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 482.2416 3 478.905253 1433.69393 89963.13 0.11687 5.597E-05 0.02626 1.2576E-05 0.14313 6.8546E-05 478.905173585454 482.241277562756 87.023 0.91904 87.023 86.652 87.572 0 182 52 6 0 0 0 0.033345 1 47730 24.071 16.87 1 1.6434 1.3921 0 2937600 972930 1964700 11253 1565 4275 4391 17576 17576 FLLEHFTDEQR 11 0 1 Unmodified _FLLEHFTDEQR_ 0 0 0 P42695;Q96FA6;E9PLE0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.2413 3 478.905253 1433.69393 90160.06 0.30832 0.00014766 0.023092 1.1059E-05 0.33141 0.00015872 478.905184127575 482.24127005733 86.905 0.99928 86.905 86.619 87.618 0 174 60 6 0 0 0 0.046345 1 46863 25.342 22.146 1 1.9488 1.6948 0 2631900 753950 1878000 11254 1565 4275 4391 17577 17577 FLLGYFPWDSTK 12 1 0 Unmodified _FLLGYFPWDSTK_ 0 0 0 C9JA93;A8K8E1;Q8TC07 C9JA93 C9JA93 TBC1D15 TBC1 domain family member 15 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.3823 2 737.374278 1472.734 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.71 1 126.71 126.21 127.21 -7.6294E-06 0 0 0 0.012653 1 82476 55.567 37.255 1 11255 776 4276 4392 17578 17578 FLLGYFPWDSTK 12 1 0 Unmodified _FLLGYFPWDSTK_ 0 0 0 C9JA93;A8K8E1;Q8TC07 C9JA93 C9JA93 TBC1D15 TBC1 domain family member 15 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.3829 2 737.374278 1472.734 NaN NaN NaN 0.63683 0.00046958 NaN NaN NaN NaN 126.26 0.31172 126.26 126.13 126.45 0 0 0 0 0.0036838 1 84281 65.347 47.035 1 NaN NaN 0 1772200 0 1772200 11256 776 4276 4392 17579 17579 FLLHEPIVNK 10 1 0 Unmodified _FLLHEPIVNK_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 404.2389 3 403.904524 1208.69174 94194.69 -0.04147 -1.675E-05 -0.032118 -1.2972E-05 -0.073587 -2.9722E-05 403.9044128423 406.575943436879 66.882 1.0663 66.882 66.636 67.702 0 300 89 5 0 0 0 0.0039807 2 39458 39.918 38.567 1 0.98954 1.1129 0 72186000 43437000 28749000 11257 886 4277 4393 17580;17581 17580 FLLHEPIVNK 10 1 0 Unmodified _FLLHEPIVNK_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 609.3603 2 605.353148 1208.69174 77751.19 0.39557 0.00023946 0.4128 0.00024989 0.80836 0.00048934 605.352968709085 609.360115324576 77.836 0.67415 77.836 77.611 78.285 0 199 42 7 0 0 0 0.0035385 1 41656 72.23 72.23 1 1.2577 1.0007 0 6666000 2997600 3668400 11258 886 4277 4393 17582 17582 FLLLQGLVEK 10 1 0 Unmodified _FLLLQGLVEK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.3655 2 580.357899 1158.70125 79257.59 0.81889 0.00047525 -0.080359 -4.6637E-05 0.73853 0.00042861 580.357823626686 584.364873994086 117.24 1.0554 117.24 116.89 117.94 0 387 72 9 0 0 0 0.00050021 2 74797 85.862 68.284 1 0.94321 1.0621 0 73856000 39278000 34577000 11259 1936 4278 4394 17583;17584 17583 FLLLQGLVEK 10 1 0 Unmodified _FLLLQGLVEK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3666 2 580.357899 1158.70125 79314.48 0.63245 0.00036705 0.044964 2.6095E-05 0.67742 0.00039314 580.357924667177 584.364930831443 116.63 0.90517 116.63 116.27 117.18 0 318 56 9 0 0 0 0.00096714 2 76101 78.334 65.807 1 0.96411 1.0855 0 69895000 35838000 34057000 11260 1936 4278 4394 17585;17586 17585 FLLLQGLVEK 10 1 0 Unmodified _FLLLQGLVEK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.3583 2 580.357899 1158.70125 79483.58 0.75775 0.00043976 -0.039635 -2.3003E-05 0.71811 0.00041676 580.357845057932 584.364848378641 129.04 1.2651 129.04 128.74 130 0 302 58 9 0 0 0 0.00072198 3 77919 82.287 72.022 1 1.2208 0.96633 0 18435000 8663900 9771400 11261 1936 4278 4394 17587;17588;17589 17588 FLLLQGLVEK 10 1 0 Unmodified _FLLLQGLVEK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.3585 2 580.357899 1158.70125 79349.73 0.76183 0.00044213 0.061421 3.5646E-05 0.82325 0.00047778 580.357892018389 584.364948992808 128.77 1.0156 128.77 128.42 129.43 0 223 42 8 0 0 0 4.8926E-08 2 76836 116.05 99.38 1 1.2946 1.0657 0 28548000 12066000 16481000 11262 1936 4278 4394 17590;17591 17591 FLLQDTVELR 10 0 1 Unmodified _FLLQDTVELR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;H0YCH5 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.3504 2 617.34552 1232.67649 76594.87 0.80994 0.00050001 -0.15772 -9.7366E-05 0.65223 0.00040265 617.846142306204 622.349566215729 103.15 0.78441 103.15 102.76 103.54 0 223 67 7 0 0 0 2.4826E-06 3 63489 110.87 63.674 1 1.7317 1.7999 0 38015000 13882000 24133000 11263 1054 4279 4395 17592;17593;17594 17593 FLLQDTVELR 10 0 1 Unmodified _FLLQDTVELR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;H0YCH5 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.3495 2 617.34552 1232.67649 NaN NaN NaN -0.30404 -0.0001877 NaN NaN NaN NaN 102.44 0.70352 102.44 102.11 102.81 0 0 0 0 8.504E-22 1 64556 149.94 87.937 1 NaN NaN 0 19738000 0 19738000 11264 1054 4279 4395 17595 17595 FLLQDTVELR 10 0 1 Unmodified _FLLQDTVELR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;H0YCH5 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.3483 2 617.34552 1232.67649 76016.52 0.69176 0.00042705 -0.12424 -7.6696E-05 0.56752 0.00035036 617.844852295033 622.349908960037 114.99 0.39159 114.99 114.8 115.19 0 59 18 4 0 0 0 0.012086 2 67307 51.113 31.326 1 1.372 1.1919 0 2245200 1013300 1231900 11265 1054 4279 4395 17596;17597 17596 FLLQDTVELR 10 0 1 Unmodified _FLLQDTVELR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;H0YCH5 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.3467 2 617.34552 1232.67649 77118.36 0.61006 0.00037662 -0.096949 -5.9851E-05 0.51312 0.00031677 617.845384212954 622.349954007614 114.82 0.557 114.82 114.64 115.2 0 67 25 5 0 0 0 0.028407 1 66320 43.442 29.235 1 1.3983 1.1965 0 3285000 1490700 1794300 11266 1054 4279 4395 17598 17598 FLLSDQSLLLLPEYHQR 17 0 1 Unmodified _FLLSDQSLLLLPEYHQR_ 0 0 0 B4DSY1;Q9NPK3;Q96BC0;O76046;Q15477;B4E0N1;B4DM01;H7C4L3 B4DSY1 B4DSY1 SKIV2L;SKI2W Helicase SKI2W MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.0485 3 691.377352 2071.11023 75022.55 0.76022 0.0005256 -0.089758 -6.2057E-05 0.67046 0.00046354 691.711884086498 695.047560980368 119.54 0.40237 119.54 119.34 119.74 0 71 28 4 0 0 0 0.0015744 1 78817 34.909 34.909 1 1.2763 1.2822 0 6662700 3162200 3500500 11267 1031 4280 4396 17599 17599 FLNAEGSGGIVGHDEISR 18 0 1 Unmodified _FLNAEGSGGIVGHDEISR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 623.3106 3 619.974506 1856.90169 77100.16 0.37399 0.00023186 -0.080107 -4.9664E-05 0.29388 0.0001822 619.974357211198 623.310271198105 76.943 0.58621 76.943 76.665 77.251 -7.6294E-06 199 37 8 0 0 0 0.0048565 1 41164 24.41 24.41 1 1.2967 1.112 0 8533900 4066100 4467800 11268 1681 4281 4397 17600 17600 FLNAEGSGGIVGHDEISR 18 0 1 Unmodified _FLNAEGSGGIVGHDEISR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.3107 3 619.974506 1856.90169 NaN NaN NaN -0.25643 -0.00015898 NaN NaN NaN NaN 77.186 0.68665 77.186 76.844 77.531 0 0 0 0 0.0047267 1 40454 39.657 34.115 1 NaN NaN 0 4404100 0 4404100 11269 1681 4281 4397 17601 17601 FLNAENAQK 9 1 0 Unmodified _FLNAENAQK_ 0 0 0 A0A140VK94;F6WQW2;P43487;C9JXG8;D3DX26;C9JGV6;B3KUP2 A0A140VK94 A0A140VK94 RANBP1 Ran-specific GTPase-activating protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.7743 2 517.766906 1033.51926 NaN NaN NaN 0.25725 0.00013319 NaN NaN NaN NaN 26.558 0.40693 26.558 26.338 26.745 0 0 0 0 8.5006E-05 1 11939 101.33 88.33 1 NaN NaN 0 42828000 0 42828000 11270 621 4282 4398 17602 17602 FLNAENAQK 9 1 0 Unmodified _FLNAENAQK_ 0 0 0 A0A140VK94;F6WQW2;P43487;C9JXG8;D3DX26;C9JGV6;B3KUP2 A0A140VK94 A0A140VK94 RANBP1 Ran-specific GTPase-activating protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.7664 2 517.766906 1033.51926 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.54 1 26.54 26.04 27.04 1.9073E-06 0 0 0 0.003268 1 11940 73.208 26.141 1 11271 621 4282 4398 17603 17603 FLPAVSDENSK 11 1 0 Unmodified _FLPAVSDENSK_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709;F5H359;F5H8G6 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.8038 2 603.803685 1205.59282 76001.81 0.72182 0.00043584 0.40997 0.00024754 1.1318 0.00068338 603.803628144406 607.8109362367 51.394 1.1028 51.394 51.024 52.127 0 409 97 9 0 0 0 5.4602E-10 2 28344 129.38 100.28 1 1.1098 1.309 0 346370000 163570000 182800000 11272 1570 4283 4399 17604;17605 17604 FLPAVSDENSK 11 1 0 Unmodified _FLPAVSDENSK_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709;F5H359;F5H8G6 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.8043 2 603.803685 1205.59282 76227.55 0.58516 0.00035332 0.07472 4.5116E-05 0.65988 0.00039844 603.803576873629 607.810843792004 50.287 1.001 50.287 49.863 50.864 0 420 88 8 0 0 0 1.3053E-08 2 28305 123.35 92.126 1 1.0661 1.2311 0 193470000 106870000 86596000 11273 1570 4283 4399 17606;17607 17607 FLPNAPK 7 1 0 Unmodified _FLPNAPK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.7368 2 393.729064 785.443575 93356.29 0.25785 0.00010152 -1.2286 -0.00048374 -0.97075 -0.00038221 393.729176405132 397.736034889367 38.496 0.77635 38.496 38.106 38.882 0 211 64 6 0 0 0 0.032217 1 19717 65.897 26.876 1 1.3497 1.462 0 43779000 17192000 26587000 11274 452 4284 4400 17608 17608 FLPNAPK 7 1 0 Unmodified _FLPNAPK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.7293 2 393.729064 785.443575 96790.59 0.060022 2.3632E-05 0.5411 0.00021305 0.60112 0.00023668 393.729131983164 397.736057142358 37.649 0.76232 37.649 37.209 37.971 0 275 61 9 0 0 0 0.040128 1 19519 59.609 26.68 1 1.3248 1.4804 0 94924000 40495000 54430000 11275 452 4284 4400 17609 17609 FLPRPPGEK 9 1 1 Unmodified _FLPRPPGEK_ 0 0 1 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.7992 2 520.798009 1039.58147 82991.59 0.54958 0.00028622 0.52321 0.00027249 1.0728 0.00055871 520.798268545197 529.809533103681 37.1 0.79944 37.1 36.56 37.359 0 294 72 6 0 0 0 0.012862 1 18678 85.212 24.424 1 0.75488 0.89977 0 49377000 29824000 19553000 11276 387 4285 4401 17610 17610 FLPRPPGEK 9 1 1 Unmodified _FLPRPPGEK_ 0 0 1 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 353.5424 3 347.534431 1039.58147 100521.6 0.27102 9.4188E-05 0.091172 3.1685E-05 0.36219 0.00012587 347.534366666512 353.541997922601 37.046 1.1327 37.046 36.342 37.475 0 275 77 6 0 0 0 0.015836 2 18679 44.318 33.56 1 0.73181 0.86688 0 40815000 24344000 16471000 11277 387 4285 4401 17611;17612 17611 FLPRPPGEK 9 1 1 Unmodified _FLPRPPGEK_ 0 0 1 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 353.5429 3 347.534431 1039.58147 102092.8 0.79238 0.00027538 -0.27913 -9.7007E-05 0.51325 0.00017837 347.534196871032 353.541962167604 35.635 0.88508 35.635 35.039 35.924 0 323 77 5 0 0 0 0.013892 2 18092 46.001 31.328 1 0.77051 0.89744 0 43046000 26874000 16172000 11278 387 4285 4401 17613;17614 17614 FLQEEAEK 8 1 0 Unmodified _FLQEEAEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.2556 2 497.248015 992.481476 92678.63 0.54324 0.00027013 0.1028 5.1115E-05 0.64604 0.00032124 497.248564732402 501.255021216078 28.139 0.4117 28.139 27.905 28.317 0 90 29 4 0 0 0 0.006912 1 13254 85.212 40.601 1 1.6211 1.6485 0 13906000 4976800 8929500 11279 1754 4286 4402 17615 17615 FLQEEAEK 8 1 0 Unmodified _FLQEEAEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2554 2 497.248015 992.481476 NaN NaN NaN -0.070926 -3.5268E-05 NaN NaN NaN NaN 27.6 0.35638 27.6 27.401 27.757 0 0 0 0 0.0031073 1 12943 102.72 51.031 1 NaN NaN 0 14071000 0 14071000 11280 1754 4286 4402 17616 17616 FLQGDSFLNEDLNQLIK 17 1 0 Unmodified _FLQGDSFLNEDLNQLIK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 997.5164 2 997.515105 1993.01566 60927.32 0.63327 0.0006317 0.16103 0.00016063 0.7943 0.00079232 998.016381634552 1002.0238943904 126.12 0.67661 126.12 125.85 126.52 -7.6294E-06 293 52 9 0 0 0 7.5374E-05 1 81935 65.563 65.563 1 1.007 1.089 0 36325000 17868000 18458000 11281 780 4287 4403 17617 17617 FLQGDSFLNEDLNQLIK 17 1 0 Unmodified _FLQGDSFLNEDLNQLIK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1002.0257 2 997.515105 1993.01566 61357.05 0.70812 0.00070636 -0.027025 -2.6958E-05 0.6811 0.00067941 998.016298828496 1001.52264236994 125.74 0.69405 125.74 125.5 126.2 0 236 43 10 0 0 0 3.5108E-05 2 83678 80.69 80.69 1 1.0417 1.157 0 49735000 24053000 25682000 11282 780 4287 4403 17618;17619 17618 FLQGFMAPK 9 1 0 Oxidation (M) _FLQGFM(ox)APK_ FLQGFM(1)APK FLQGFM(102.71)APK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.7802 2 527.773145 1053.53174 NaN NaN NaN -1.2173 -0.00064244 NaN NaN NaN NaN 71.314 1.0701 71.314 71.063 72.133 0 0 0 0 2.1543E-05 2 41591 102.71 63.692 1 NaN NaN 0 58404000 0 58404000 11283 2103 4288 4404 17620;17621 17621 1926 FLQVQPVSR 9 0 1 Unmodified _FLQVQPVSR_ 0 0 0 H0YMP3;H1UBN3;Q5U0M0;Q53HG9;O95067 H0YMP3 H0YMP3 CCNB2;CCNB2V G2/mitotic-specific cyclin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.3097 2 537.308741 1072.60293 84752.15 0.7966 0.00042802 0.84725 0.00045524 1.6439 0.00088326 537.309290941785 542.313160181071 60.165 0.35269 60.165 59.967 60.32 0 84 29 4 0 0 0 0.00080518 2 34326 94.114 77.912 1 0.96444 0.96827 0 17198000 8602100 8596100 11284 1297 4289 4405 17622;17623 17623 FLQVQPVSR 9 0 1 Unmodified _FLQVQPVSR_ 0 0 0 H0YMP3;H1UBN3;Q5U0M0;Q53HG9;O95067 H0YMP3 H0YMP3 CCNB2;CCNB2V G2/mitotic-specific cyclin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.3135 2 537.308741 1072.60293 83998.81 0.88867 0.00047749 0.79262 0.00042588 1.6813 0.00090338 537.309263557667 542.313011272472 58.933 0.33583 58.933 58.771 59.106 0 88 31 4 0 0 0 2.4592E-05 2 34245 114.28 93.761 1 1.0511 1.0711 0 20606000 11193000 9412500 11285 1297 4289 4405 17624;17625 17624 FLQVQPVSR 9 0 1 Unmodified _FLQVQPVSR_ 0 0 0 H0YMP3;H1UBN3;Q5U0M0;Q53HG9;O95067 H0YMP3 H0YMP3 CCNB2;CCNB2V G2/mitotic-specific cyclin-B2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.3127 2 537.308741 1072.60293 89349.67 0.41064 0.00022064 0.067049 3.6026E-05 0.47768 0.00025666 537.810294610052 542.312708798936 69.358 0.37321 69.358 69.148 69.521 0 62 23 4 0 0 0 0.020055 2 36394 50.607 41.744 1 1.1366 0.99811 0 1823300 638010 1185300 11286 1297 4289 4405 17626;17627 17627 FLQVQPVSR 9 0 1 Unmodified _FLQVQPVSR_ 0 0 0 H0YMP3;H1UBN3;Q5U0M0;Q53HG9;O95067 H0YMP3 H0YMP3 CCNB2;CCNB2V G2/mitotic-specific cyclin-B2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.3088 2 537.308741 1072.60293 89841.11 0.48834 0.00026239 -0.34515 -0.00018545 0.14319 7.6937E-05 537.308845975562 542.312398652197 69.805 0.35135 69.805 69.571 69.923 0 66 24 4 0 0 0 0.035569 1 35835 43.808 36.588 1 0.96133 0.82876 0 1667200 803050 864120 11287 1297 4289 4405 17628 17628 FLSAIVSSVDK 11 1 0 Unmodified _FLSAIVSSVDK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.3348 2 583.326796 1164.63904 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.449 1 90.449 89.949 90.949 7.6294E-06 0 0 0 0.047667 1 54660 43.77 12.541 1 11288 352 4290 4406 17629 17629 FLSESVLAVAGDEEVIR 17 0 1 Unmodified _FLSESVLAVAGDEEVIR_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.4844 2 917.483273 1832.95199 63018.68 0.87978 0.00080718 0.85554 0.00078494 1.7353 0.0015921 917.484461612538 922.487508895564 115.68 0.68004 115.68 115.44 116.12 7.6294E-06 269 43 9 0 0 0 5.6791E-09 1 73712 102.66 102.66 1 1.0386 1.1306 0 51030000 25437000 25593000 11289 580 4291 4407 17630 17630 FLSESVLAVAGDEEVIR 17 0 1 Unmodified _FLSESVLAVAGDEEVIR_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 922.4882 2 917.483273 1832.95199 63343.26 0.52066 0.0004777 1.5264 0.0014004 2.047 0.0018781 917.9870739444 922.487901180712 127.32 0.98045 127.32 126.78 127.76 0 260 40 10 0 0 0 1.3065E-06 2 76602 88.163 82.215 1 1.2223 1.051 0 46673000 16270000 30402000 11290 580 4291 4407 17631;17632 17631 FLSESVLAVAGDEEVIR 17 0 1 Unmodified _FLSESVLAVAGDEEVIR_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 917.9896 2 917.483273 1832.95199 63522.27 0.49688 0.00045588 1.4318 0.0013137 1.9287 0.0017695 917.987104662475 922.487851752416 127.1 1.1 127.1 126.66 127.76 -7.6294E-06 266 47 9 0 0 0 4.3122E-05 2 75619 79.089 79.089 1 1.2638 1.1024 0 32613000 14180000 18433000 11291 580 4291 4407 17633;17634 17634 FLSLANK 7 1 0 Unmodified _FLSLANK_ 0 0 0 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.7412 2 396.734346 791.454139 95003.46 0.27027 0.00010723 0.072531 2.8775E-05 0.3428 0.000136 396.734244211234 400.741356869464 53.418 0.67667 53.418 53.155 53.831 0 187 51 6 0 0 0 0.015104 2 29791 99.384 21.888 1 0.92316 1.0407 0 128710000 65565000 63144000 11292 30 4292 4408 17635;17636 17636 FLSLANK 7 1 0 Unmodified _FLSLANK_ 0 0 0 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 396.7341 2 396.734346 791.454139 93738.69 0.30541 0.00012117 -0.085882 -3.4072E-05 0.21953 8.7095E-05 396.734207647322 400.741329904327 52.04 0.81802 52.04 51.765 52.583 0 232 62 8 0 0 0 0.026873 1 29484 81.381 3.6328 1 0.86239 0.96843 0 116440000 63781000 52661000 11293 30 4292 4408 17637 17637 FLSLANK 7 1 0 Unmodified _FLSLANK_ 0 0 0 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 400.7413 2 396.734346 791.454139 97759.2 0.080541 3.1953E-05 -0.049785 -1.9751E-05 0.030756 1.2202E-05 396.734217640025 400.741176250467 60.567 0.69675 60.567 60.322 61.019 0 233 61 6 0 0 0 0.045076 1 30997 57.335 9.2198 1 0.99908 0.79109 0 6277600 2901300 3376300 11294 30 4292 4408 17638 17638 FLSNGHVTIPGQQDK 15 1 0 Unmodified _FLSNGHVTIPGQQDK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.6236 3 547.617883 1639.83182 81697.27 0.68831 0.00037693 -0.37505 -0.00020539 0.31325 0.00017154 547.617794246065 550.28881348879 56.929 0.73542 56.929 56.694 57.429 -3.8147E-06 353 59 9 0 0 0 6.8672E-05 1 32035 68.576 68.576 1 1.7239 1.9146 0 59793000 22920000 36873000 11295 81 4293 4409 17639 17639 FLSNGHVTIPGQQDK 15 1 0 Unmodified _FLSNGHVTIPGQQDK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.6186 3 547.617883 1639.83182 82576.38 0.31767 0.00017396 0.021482 1.1764E-05 0.33915 0.00018572 547.618070292898 550.288986889072 55.743 0.66725 55.743 55.477 56.145 0 304 52 10 0 0 0 1.6491E-06 2 31952 96.489 96.489 1 1.6914 1.8901 0 93633000 32734000 60899000 11296 81 4293 4409 17640;17641 17641 FLSNGHVTIPGQQDK 15 1 0 Unmodified _FLSNGHVTIPGQQDK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.9297 2 820.923186 1639.83182 69005.46 0.57757 0.00047414 0.43366 0.000356 1.0112 0.00083014 821.425355170599 825.43201485587 55.732 0.2571 55.732 55.62 55.877 3.8147E-06 41 19 4 0 0 0 0.0056186 1 31939 51.463 51.463 1 1.8845 1.9057 0 8842400 4103000 4739400 11297 81 4293 4409 17642 17642 FLSNGHVTIPGQQDK 15 1 0 Unmodified _FLSNGHVTIPGQQDK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.6185 3 547.617883 1639.83182 81321.08 0.62427 0.00034186 -1.0748 -0.00058858 -0.45053 -0.00024672 547.61780648179 550.622844581833 66.212 0.73268 66.212 65.932 66.665 0 197 42 8 0 0 0 0.049006 2 34397 16.666 15.514 1 3.9062 3.1012 0 6496900 1234100 5262800 11298 81 4293 4409 17643;17644 17644 FLSPPALQGYVAWLR 15 0 1 Unmodified _FLSPPALQGYVAWLR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.4809 2 859.474857 1716.93516 66439.96 1.264 0.0010864 -0.074524 -6.4052E-05 1.1895 0.0010223 859.473953800918 864.479601347411 130.81 0.81523 130.81 130.47 131.28 0 255 52 8 0 0 0 0.00022533 2 85184 72.006 72.006 1 0.71061 0.73398 0 20101000 11356000 8745700 11299 1997 4294 4410 17645;17646 17645 FLSPPALQGYVAWLR 15 0 1 Unmodified _FLSPPALQGYVAWLR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 864.9832 2 859.474857 1716.93516 66307.09 0.94568 0.00081279 0.20035 0.00017219 1.146 0.00098498 859.474445911648 864.479834445205 130.4 0.66409 130.4 130.05 130.71 0 274 42 8 0 0 0 0.00012906 3 87014 80.706 79.974 1 0.73885 0.80908 0 31027000 18266000 12761000 11300 1997 4294 4410 17647;17648;17649 17649 FLSPPALQGYVAWLR 15 0 1 Unmodified _FLSPPALQGYVAWLR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.9402 2 859.474857 1716.93516 73555.37 0.71218 0.0006121 -1.0495 -0.00090203 -0.33734 -0.00028993 859.975767994219 864.978728277769 134.82 0.23972 134.82 134.7 134.94 0 10 4 4 0 0 0 0.00036708 1 82454 70.412 70.412 1 1.1304 0.92303 0 14360000 6453300 7906400 11301 1997 4294 4410 17650 17650 FLSPQDTFEALK 12 1 0 Unmodified _FLSPQDTFEALK_ 0 0 0 B4DRP9;Q69YJ7;Q9NTZ6 B4DRP9 B4DRP9 DKFZp667H197;RBM12 RNA-binding protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.872 2 698.361367 1394.70818 73751.74 0.71103 0.00049656 1.0057 0.00070235 1.7167 0.0011989 698.361282914084 702.871874989854 105.63 0.51297 105.63 105.29 105.81 0 90 35 4 0 0 0 0.021318 1 67088 38.75 27.531 1 0.61875 0.62508 0 8461700 3870700 4591000 11302 1027 4295 4411 17651 17651 FLSSAAAVSK 10 1 0 Unmodified _FLSSAAAVSK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7815 2 490.7742 979.533846 92375.34 0.63782 0.00031303 0.8594 0.00042177 1.4972 0.0007348 490.774344825733 494.781946726086 39.722 0.1944 39.722 39.612 39.806 3.8147E-06 47 15 5 0 0 0 0.01288 1 21120 50.034 28.759 1 0.74032 0.78115 0 19977000 9437500 10540000 11303 1259 4296 4412 17652 17652 FLTLPPVLHLQLMR 14 0 1 Oxidation (M) _FLTLPPVLHLQLM(ox)R_ FLTLPPVLHLQLM(1)R FLTLPPVLHLQLM(58.67)R 0 1 0 Q93009;B7ZAX6;B7Z855;H3BND8;B7Z7T5;F5H2X1;B7Z842 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.6664 3 565.332249 1692.97492 82229.34 1.0662 0.00060275 -0.77511 -0.00043819 0.29109 0.00016456 565.331702028966 568.667925219469 120.17 0.58141 120.17 119.83 120.41 0 177 41 6 0 0 0 0.0001875 1 79266 58.674 58.674 1 0.98577 0.99228 0 10830000 4864400 5965500 11304 1954 4297 4413 17653 17653 1803 FLTVMMK 7 1 0 2 Oxidation (M) _FLTVM(ox)M(ox)K_ FLTVM(1)M(1)K FLTVM(40.1)M(40.1)K 0 2 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2368 2 451.229725 900.444896 NaN NaN NaN 0.16328 7.3678E-05 NaN NaN NaN NaN 40.604 0.51024 40.604 40.357 40.867 3.8147E-06 0 0 0 0.021843 1 21168 40.103 40.103 1 NaN NaN 0 60123000 0 60123000 11305 831 4298 4414 17654 17654 658;659 FLTVMMK 7 1 0 2 Oxidation (M) _FLTVM(ox)M(ox)K_ FLTVM(1)M(1)K FLTVM(49.36)M(49.36)K 0 2 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.23 2 451.229725 900.444896 89311.8 0.46103 0.00020803 0.14955 6.748E-05 0.61058 0.00027551 451.229568903818 455.236818996392 39.631 0.48126 39.631 39.398 39.88 3.8147E-06 198 40 7 0 0 0 0.032908 1 20985 49.358 39.175 1 3.6311 4.0585 0 99273000 21515000 77758000 11306 831 4298 4414 17655 17655 658;659 FLTVMMK 7 1 0 2 Oxidation (M) _FLTVM(ox)M(ox)K_ FLTVM(1)M(1)K FLTVM(44.72)M(44.72)K 0 2 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.5769 2 451.229725 900.444896 89355.27 0.43497 0.00019627 0.75024 0.00033853 1.1852 0.0005348 451.229625454746 455.236873153388 40.017 0.51661 40.017 39.847 40.364 0 193 44 7 0 0 0 0.036067 1 21332 44.721 32.168 1 4.2817 4.8111 0 55940000 9265300 46674000 11307 831 4298 4414 17656 17656 658;659 FLVHESFLYR 10 0 1 Unmodified _FLVHESFLYR_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0;B3KPY2;B3KP60 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.5675 3 437.567912 1309.68191 NaN NaN NaN -0.11132 -4.8711E-05 NaN NaN NaN NaN 81.479 0.39687 81.479 81.216 81.613 0 0 0 0 0.0453 1 49673 25.296 21.533 1 NaN NaN 0 7091400 7091400 0 11308 1781 4299 4415 17657 17657 FLVHNVK 7 1 0 Unmodified _FLVHNVK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910;A0A090N8E7 D3YTB1 D3YTB1 RPL32;LOC402318 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 428.7555 2 428.755613 855.496673 89907.07 -0.046365 -1.9879E-05 -0.16989 -7.2839E-05 -0.21625 -9.2719E-05 428.755588702688 432.762498104097 27.687 1.1866 27.687 27.339 28.525 0 321 81 8 0 0 0 0.010659 2 12788 110.54 64.913 1 0.85184 1.024 0 1177200000 618220000 559030000 11309 112 4300 4416 17658;17659 17659 FLVHNVK 7 1 0 Unmodified _FLVHNVK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910;A0A090N8E7 D3YTB1 D3YTB1 RPL32;LOC402318 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 428.7556 2 428.755613 855.496673 91273.04 0.058759 2.5193E-05 -0.34832 -0.00014935 -0.28956 -0.00012415 428.75564758938 432.76241991685 26.712 1.0208 26.712 26.503 27.524 0 180 50 8 0 0 0 0.0099923 2 12032 116 59.744 1 1.0126 1.1964 0 1295700000 681880000 613780000 11310 112 4300 4416 17660;17661 17661 FLVHNVK 7 1 0 Unmodified _FLVHNVK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910;A0A090N8E7 D3YTB1 D3YTB1 RPL32;LOC402318 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 432.7627 2 428.755613 855.496673 90505.16 -0.33711 -0.00014454 -0.32137 -0.00013779 -0.65848 -0.00028233 428.755694679001 432.762684988515 30.571 2.2644 30.571 30.249 32.513 -1.9073E-06 508 133 7 0 0 0 0.034447 1 12636 62.338 35.022 1 0.72485 0.61256 0 57598000 32679000 24919000 11311 112 4300 4416 17662 17662 FLVHNVK 7 1 0 Unmodified _FLVHNVK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910;A0A090N8E7 D3YTB1 D3YTB1 RPL32;LOC402318 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 432.7623 2 428.755613 855.496673 88954.45 -0.59988 -0.0002572 -0.23371 -0.0001002 -0.83359 -0.00035741 428.755847245375 432.762778153011 30.206 2.2594 30.206 29.843 32.102 1.9073E-06 419 127 8 0 0 0 0.02838 1 11926 72.021 44.704 1 0.7464 0.62881 0 53321000 29746000 23576000 11312 112 4300 4416 17663 17663 FLVQNIHTLAELK 13 1 0 Unmodified _FLVQNIHTLAELK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.6302 3 509.296081 1524.86641 84522.43 0.83998 0.0004278 -0.12194 -6.2106E-05 0.71804 0.00036569 509.295996148387 511.967356417774 96.487 1.4456 96.487 95.957 97.402 0 649 127 9 0 0 0 4.5689E-05 3 59104 88.552 76.576 1 0.98062 1.1607 0 433500000 224160000 209330000 11313 1934 4301 4417 17664;17665;17666 17666 FLVQNIHTLAELK 13 1 0 Unmodified _FLVQNIHTLAELK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.4483 2 763.440483 1524.86641 70247.52 1.0261 0.0007834 0.57734 0.00044076 1.6035 0.0012242 763.441770982702 767.447567001345 96.498 0.87092 96.498 96.152 97.023 0 267 74 6 0 0 0 2.4551E-06 3 58684 122.69 122.69 1 1.1422 1.2847 0 71438000 30401000 41037000 11314 1934 4301 4417 17667;17668;17669 17668 FLVQNIHTLAELK 13 1 0 Unmodified _FLVQNIHTLAELK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.9672 3 509.296081 1524.86641 NaN NaN NaN -0.43688 -0.0002225 NaN NaN NaN NaN 96.832 0.44667 96.832 96.797 97.244 0 0 0 0 2.7755E-06 1 59070 98.942 77.713 1 NaN NaN 0 38319000 0 38319000 11315 1934 4301 4417 17670 17670 FLVQNIHTLAELK 13 1 0 Unmodified _FLVQNIHTLAELK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.6303 3 509.296081 1524.86641 84649.84 0.64836 0.00033021 -0.21903 -0.00011155 0.42934 0.00021866 509.29601253949 511.967280578439 95.177 1.2254 95.177 94.676 95.901 7.6294E-06 633 104 10 0 0 0 4.3255E-05 4 59064 86.467 79.265 1 0.97773 1.1486 0 353530000 179150000 174380000 11316 1934 4301 4417 17671;17672;17673;17674 17672 FLVQNIHTLAELK 13 1 0 Unmodified _FLVQNIHTLAELK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.448 2 763.440483 1524.86641 70184.89 0.86028 0.00065677 1.0885 0.000831 1.9488 0.0014878 763.440886228874 767.447611230338 95.185 0.79584 95.185 94.801 95.597 0 277 68 6 0 0 0 0.0003676 1 59051 68.676 68.676 1 0.91452 1.0311 0 67440000 32800000 34640000 11317 1934 4301 4417 17675 17675 FLVQNIHTLAELK 13 1 0 Unmodified _FLVQNIHTLAELK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.4404 2 763.440483 1524.86641 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.932 1 94.932 94.432 95.432 -7.6294E-06 0 0 0 0.0019276 1 59065 69.346 37.025 1 11318 1934 4301 4417 17676 17676 FLVQNIHTLAELK 13 1 0 Unmodified _FLVQNIHTLAELK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.9678 3 509.296081 1524.86641 84251.15 0.58327 0.00029706 -0.13762 -7.0089E-05 0.44565 0.00022697 509.296131254125 511.967353300121 108.95 1.3947 108.95 108.69 110.09 0 353 68 11 0 0 0 1.1219E-05 2 62577 97.86 90.658 1 1.3659 1.1745 0 88156000 38279000 49877000 11319 1934 4301 4417 17677;17678 17677 FLVQNIHTLAELK 13 1 0 Unmodified _FLVQNIHTLAELK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.4486 2 763.440483 1524.86641 70207.35 0.75102 0.00057336 0.33844 0.00025838 1.0895 0.00083174 763.44063779595 767.447603162772 108.95 0.46825 108.95 108.73 109.2 -7.6294E-06 161 22 10 0 0 0 9.4942E-11 2 62593 149.23 149.23 1 1.1424 0.93225 0 32868000 14096000 18772000 11320 1934 4301 4417 17679;17680 17679 FLVQNIHTLAELK 13 1 0 Unmodified _FLVQNIHTLAELK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.9674 3 509.296081 1524.86641 84437.99 0.47153 0.00024015 -0.23664 -0.00012052 0.23489 0.00011963 509.296055763922 511.967289010395 108.66 1.1308 108.66 108.42 109.55 0 371 54 10 0 0 0 3.6514E-05 3 61505 76.588 76.588 1 1.5779 1.3447 0 90129000 35760000 54369000 11321 1934 4301 4417 17681;17682;17683 17681 FLVQNIHTLAELK 13 1 0 Unmodified _FLVQNIHTLAELK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 767.4479 2 763.440483 1524.86641 NaN NaN NaN -0.11976 -9.1428E-05 NaN NaN NaN NaN 108.66 0.93819 108.66 108.47 109.4 0 0 0 0 0.0074258 1 61495 54.486 38.262 1 NaN NaN 0 20352000 0 20352000 11322 1934 4301 4417 17684 17684 FLYDDNQR 8 0 1 Unmodified _FLYDDNQR_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.7542 2 535.748713 1069.48287 82442.01 0.79618 0.00042655 -0.50982 -0.00027314 0.28636 0.00015342 535.748578688674 540.752495841397 41.517 1.532 41.517 41.028 42.56 0 584 122 10 0 0 0 0.0066199 1 21759 86.472 56.705 1 0.69144 0.8221 0 1231400000 716490000 514860000 11323 1471;1679 4302 4418 17685 17685 FLYDDNQR 8 0 1 Unmodified _FLYDDNQR_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.749 2 535.748713 1069.48287 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.141 1 42.141 41.641 42.641 0 0 0 0 0.042109 1 22334 57.177 39.192 1 11324 1471;1679 4302 4418 17686 17686 FLYDDNQR 8 0 1 Unmodified _FLYDDNQR_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.7482 2 535.748713 1069.48287 81073.53 0.622 0.00033324 -0.26846 -0.00014383 0.35354 0.00018941 535.748767320309 540.752640998066 40.421 2.0485 40.421 39.806 41.855 0 712 170 10 0 0 0 0.0038328 2 21467 95.541 58.467 1 0.71829 0.85002 0 1603600000 926490000 677150000 11325 1471;1679 4302 4418 17687;17688 17687 FLYESSSR 8 0 1 Unmodified _FLYESSSR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DXB7;Q75L29 Q86XI2 Q86XI2 NCAPG2;FLJ20311 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.7407 2 494.740357 987.46616 85835.24 0.42311 0.00020933 0.31679 0.00015673 0.7399 0.00036606 494.740621607603 499.744566330627 37.96 0.75454 37.96 37.527 38.282 0 224 63 5 0 0 0 0.026448 1 19242 54.549 54.549 1 0.83722 0.85912 0 25766000 15965000 9800100 11326 1887 4303 4419 17689 17689 FLYESSSR 8 0 1 Unmodified _FLYESSSR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DXB7;Q75L29 Q86XI2 Q86XI2 NCAPG2;FLJ20311 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7408 2 494.740357 987.46616 85815.14 0.3606 0.0001784 0.39032 0.00019311 0.75092 0.00037151 494.740578228876 499.744653664604 36.958 0.82462 36.958 36.613 37.438 0 204 64 5 0 0 0 0.017078 1 19098 60.682 60.682 1 0.86732 0.92617 0 24748000 13962000 10786000 11327 1887 4303 4419 17690 17690 FLYESSSR 8 0 1 Unmodified _FLYESSSR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DXB7;Q75L29 Q86XI2 Q86XI2 NCAPG2;FLJ20311 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 499.7447 2 494.740357 987.46616 86315.14 -0.19993 -9.8914E-05 0.34631 0.00017134 0.14638 7.2421E-05 494.740512192164 499.744640546097 42.79 0.97495 42.79 42.433 43.408 3.8147E-06 239 60 6 0 0 0 0.057457 1 19532 41.029 34.926 1 1.923 1.5954 0 5154500 2033900 3120700 11328 1887 4303 4419 17691 17691 FLYQLHETEK 10 1 0 Unmodified _FLYQLHETEK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.3364 2 654.335153 1306.65575 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.089 1 48.089 47.589 48.589 0 0 0 0 0.00050608 1 26851 71.451 41.641 1 11329 1411 4304 4420 17692 17692 FMDASALTGIPLPLIK 16 1 0 Oxidation (M) _FM(ox)DASALTGIPLPLIK_ FM(1)DASALTGIPLPLIK FM(111.94)DASALTGIPLPLIK 0 1 0 A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9 A0A024RB10 A0A024RB10 CDK2 Cyclin-dependent kinase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 856.4852 2 851.976041 1701.93753 NaN NaN NaN -0.30508 -0.00025992 NaN NaN NaN NaN 128.95 0.29276 128.95 128.89 129.18 1.5259E-05 0 0 0 3.7659E-13 1 84090 111.94 97.517 1 NaN NaN 0 10265000 0 10265000 11330 318 4305 4421 17693 17693 242 FMDASALTGIPLPLIK 16 1 0 Oxidation (M) _FM(ox)DASALTGIPLPLIK_ FM(1)DASALTGIPLPLIK FM(139.76)DASALTGIPLPLIK 0 1 0 A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9 A0A024RB10 A0A024RB10 CDK2 Cyclin-dependent kinase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.9834 2 851.976041 1701.93753 NaN NaN NaN -1.086 -0.00092521 NaN NaN NaN NaN 128.54 0.16132 128.54 128.44 128.6 0 0 0 0 8.4371E-27 1 85909 139.76 129.45 1 NaN NaN 0 8686300 0 8686300 11331 318 4305 4421 17694 17694 242 FMFNIADGGFTELHSLWQNEER 22 0 1 Oxidation (M) _FM(ox)FNIADGGFTELHSLWQNEER_ FM(1)FNIADGGFTELHSLWQNEER FM(41.91)FNIADGGFTELHSLWQNEER 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 889.7458 3 886.407822 2656.20164 67047.84 0.68826 0.00061008 0.14614 0.00012954 0.83441 0.00073962 886.742306347854 890.412113105757 124.18 0.65045 124.18 123.82 124.47 0 265 44 8 0 0 0 1.1928E-05 1 80561 41.912 41.912 1 0.74297 0.73824 0 8430900 4364800 4066100 11332 515 4306 4422 17695 17695 372 FMFNIADGGFTELHSLWQNEER 22 0 1 Oxidation (M) _FM(ox)FNIADGGFTELHSLWQNEER_ FM(1)FNIADGGFTELHSLWQNEER FM(70.92)FNIADGGFTELHSLWQNEER 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.7428 3 886.407822 2656.20164 65567.67 0.66761 0.00059178 0.39045 0.0003461 1.0581 0.00093787 886.742276183043 890.078620133214 123.67 0.69382 123.67 123.34 124.03 0 337 49 9 0 0 0 9.611E-09 2 82093 70.917 70.917 1 0.82168 0.81502 0 15877000 8995800 6881200 11333 515 4306 4422 17696;17697 17696 372 FMIELTK 7 1 0 Oxidation (M) _FM(ox)IELTK_ FM(1)IELTK FM(40.27)IELTK 0 1 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.2497 2 449.241147 896.46774 NaN NaN NaN 1.257 0.00056471 NaN NaN NaN NaN 73.068 0.11321 73.068 72.985 73.098 0 0 0 0 0.035484 1 42884 40.268 22.283 1 NaN NaN 0 5379600 0 5379600 11334 1835 4307 4423 17698 17698 1690 FMNAVFFLLPK 11 1 0 Oxidation (M) _FM(ox)NAVFFLLPK_ FM(1)NAVFFLLPK FM(69.42)NAVFFLLPK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.866 2 671.865034 1341.71552 74872.8 0.90356 0.00060707 -0.10665 -7.1658E-05 0.7969 0.00053541 671.86490651647 675.871948539588 124.51 0.54475 124.51 124.24 124.79 0 225 37 8 0 0 0 0.00057525 2 80783 69.423 59.47 1 0.99967 1.0592 0 16189000 7571500 8617500 11335 1665 4308 4424 17699;17700 17700 1448 FMNAVFFLLPK 11 1 0 Oxidation (M) _FM(ox)NAVFFLLPK_ FM(1)NAVFFLLPK FM(84.61)NAVFFLLPK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.8721 2 671.865034 1341.71552 NaN NaN NaN -0.96828 -0.00065055 NaN NaN NaN NaN 123.98 0.52237 123.98 123.75 124.28 0 0 0 0 0.00039157 1 82329 84.615 75.182 1 NaN NaN 0 7327900 0 7327900 11336 1665 4308 4424 17701 17701 1448 FMNAVFFLLPK 11 1 0 Oxidation (M) _FM(ox)NAVFFLLPK_ FM(1)NAVFFLLPK FM(78.52)NAVFFLLPK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.8661 2 671.865034 1341.71552 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.9 1 123.9 123.4 124.4 0 0 0 0 0.00014196 1 82350 78.516 64.359 1 11337 1665 4308 4424 17702 17702 1448 FMNHSCQPNCETLK 14 1 0 Oxidation (M) _FM(ox)NHSCQPNCETLK_ FM(1)NHSCQPNCETLK FM(47.56)NHSCQPNCETLK 0 1 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.3821 2 891.373831 1780.73311 65380.15 0.33824 0.0003015 0.45813 0.00040836 0.79637 0.00070986 891.875569624114 895.381953454986 22.536 0.21786 22.536 22.412 22.63 0 30 8 6 0 0 0 0.0015472 1 8563 47.559 31.669 1 0.6804 0.73001 0 3812400 2146800 1665600 11338 1435 4309 4425 17703 17703 1134 FMQDPMEVFVDDETK 15 1 0 2 Oxidation (M) _FM(ox)QDPM(ox)EVFVDDETK_ FM(1)QDPM(1)EVFVDDETK FM(49.45)QDPM(49.45)EVFVDDETK 0 2 0 O00148;B4DX78 O00148 O00148 DDX39A ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.8953 2 931.894785 1861.77502 64327.78 0.32524 0.00030309 0.24145 0.00022501 0.56669 0.0005281 931.894869574194 935.902338929305 77.702 0.51607 77.702 77.46 77.976 0 113 38 5 0 0 0 0.001007 1 45903 49.448 41.724 1 2.7141 2.6633 0 8800100 2737400 6062700 11339 1359 4310 4426 17704 17704 1026;1027 FMQDPMEVFVDDETK 15 1 0 2 Oxidation (M) _FM(ox)QDPM(ox)EVFVDDETK_ FM(1)QDPM(1)EVFVDDETK FM(107.37)QDPM(107.37)EVFVDDETK 0 2 0 O00148;B4DX78 O00148 O00148 DDX39A ATP-dependent RNA helicase DDX39A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 935.9023 2 931.894785 1861.77502 NaN NaN NaN -0.34422 -0.00032077 NaN NaN NaN NaN 76.585 0.44698 76.585 76.369 76.816 0 0 0 0 5.3747E-11 2 45173 107.37 96.762 1 NaN NaN 0 7228900 0 7228900 11340 1359 4310 4426 17705;17706 17706 1026;1027 FMQDPMEVFVDDETK 15 1 0 2 Oxidation (M) _FM(ox)QDPM(ox)EVFVDDETK_ FM(1)QDPM(1)EVFVDDETK FM(50.56)QDPM(50.56)EVFVDDETK 0 2 0 O00148;B4DX78 O00148 O00148 DDX39A ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 935.9021 2 931.894785 1861.77502 63915.75 0.37978 0.00035391 -0.066746 -6.22E-05 0.31303 0.00029171 931.894282001666 935.902026017604 76.787 0.45892 76.787 76.575 77.034 0 87 34 5 0 0 0 0.00090979 2 46291 50.562 44.686 1 2.0504 2.1061 0 11710000 3418600 8291100 11341 1359 4310 4426 17707;17708 17707 1026;1027 FMQDPMEVFVDDETK 15 1 0 2 Oxidation (M) _FM(ox)QDPM(ox)EVFVDDETK_ FM(1)QDPM(1)EVFVDDETK FM(53.97)QDPM(53.97)EVFVDDETK 0 2 0 O00148;B4DX78 O00148 O00148 DDX39A ATP-dependent RNA helicase DDX39A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 935.9021 2 931.894785 1861.77502 NaN NaN NaN -0.28351 -0.0002642 NaN NaN NaN NaN 75.703 0.40231 75.703 75.503 75.905 0 0 0 0 0.0012698 1 45575 53.967 50.542 1 NaN NaN 0 8394300 0 8394300 11342 1359 4310 4426 17709 17709 1026;1027 FMYDPQTDQNIK 12 1 0 Oxidation (M) _FM(ox)YDPQTDQNIK_ FM(1)YDPQTDQNIK FM(67.11)YDPQTDQNIK 0 1 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5;F5H2X1;B7Z842 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.3505 2 758.342849 1514.67114 72571.68 0.45089 0.00034193 -0.02977 -2.2576E-05 0.42112 0.00031935 758.342828042824 762.349770757009 52.072 0.36845 52.072 51.924 52.292 -3.8147E-06 87 28 5 0 0 0 0.00033887 2 28897 67.113 67.113 1 0.74734 0.76572 0 10578000 5687400 4890700 11343 1954 4311 4427 17710;17711 17711 1804 FMYDPQTDQNIK 12 1 0 Oxidation (M) _FM(ox)YDPQTDQNIK_ FM(1)YDPQTDQNIK FM(59.07)YDPQTDQNIK 0 1 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5;F5H2X1;B7Z842 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.3431 2 758.342849 1514.67114 NaN NaN NaN -0.58512 -0.00044372 NaN NaN NaN NaN 50.95 0.22162 50.95 50.822 51.044 0 0 0 0 0.0022218 1 28763 59.067 52.378 1 NaN NaN 0 3604700 3604700 0 11344 1954 4311 4427 17712 17712 1804 FNADEFEDMVAEK 13 1 0 Oxidation (M) _FNADEFEDM(ox)VAEK_ FNADEFEDM(1)VAEK FNADEFEDM(140.78)VAEK 0 1 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.8303 2 780.829771 1559.64499 68428.54 0.40865 0.00031909 -0.041835 -3.2666E-05 0.36682 0.00028642 780.829879560251 784.836946150034 77.791 0.72947 77.791 77.424 78.153 0 445 56 11 0 0 0 5.5107E-19 2 45835 140.78 133.65 1 1.2429 1.4408 0 238850000 107640000 131210000 11345 1524;1266 4312 4428 17713;17714 17714 970 FNADEFEDMVAEK 13 1 0 Oxidation (M) _FNADEFEDM(ox)VAEK_ FNADEFEDM(1)VAEK FNADEFEDM(229)VAEK 0 1 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.8303 2 780.829771 1559.64499 68295.42 0.53233 0.00041566 -0.1087 -8.4878E-05 0.42363 0.00033078 780.829741652457 784.836882607636 78.471 1.1131 78.471 78.067 79.18 0 642 99 10 0 0 0 3.9663E-89 2 46365 229 221 1 1.3331 1.5647 0 303830000 133830000 170000000 11346 1524;1266 4312 4428 17715;17716 17716 970 FNADEFEDMVAEK 13 1 0 Oxidation (M) _FNADEFEDM(ox)VAEK_ FNADEFEDM(1)VAEK FNADEFEDM(166.11)VAEK 0 1 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.8374 2 780.829771 1559.64499 67591.8 0.47706 0.0003725 -0.045704 -3.5687E-05 0.43135 0.00033681 780.82985154828 784.836893955156 76.886 0.73473 76.886 76.527 77.262 7.6294E-06 448 56 10 0 0 0 1.9514E-30 2 46310 166.11 158.98 1 1.2124 1.4217 0 327940000 147290000 180650000 11347 1524;1266 4312 4428 17717;17718 17717 970 FNADEFEDMVAEK 13 1 0 Oxidation (M) _FNADEFEDM(ox)VAEK_ FNADEFEDM(1)VAEK FNADEFEDM(146.16)VAEK 0 1 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.8298 2 780.829771 1559.64499 68795.88 0.82749 0.00064613 -0.10754 -8.3972E-05 0.71995 0.00056216 780.82982130185 784.836874371137 77.579 1.1734 77.579 77.226 78.399 0 597 98 10 0 0 0 2.4809E-19 3 46868 146.16 140.85 1 1.2914 1.5144 0 328660000 144440000 184220000 11348 1524;1266 4312 4428 17719;17720;17721 17720 970 FNADEFEDMVAEK 13 1 0 Oxidation (M) _FNADEFEDM(ox)VAEK_ FNADEFEDM(1)VAEK FNADEFEDM(80.24)VAEK 0 1 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.8378 2 780.829771 1559.64499 67907.94 0.74518 0.00058186 -0.4067 -0.00031756 0.33848 0.00026429 780.829501456348 784.836694265775 89.366 0.80435 89.366 89.074 89.879 0 367 50 10 0 0 0 6.4557E-05 2 49282 84.605 80.842 1 0.89914 0.74042 0 40373000 20678000 19696000 11349 1524;1266 4312 4428 17722;17723 17723 970 FNADEFEDMVAEK 13 1 0 Oxidation (M) _FNADEFEDM(ox)VAEK_ FNADEFEDM(1)VAEK FNADEFEDM(146.16)VAEK 0 1 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.8303 2 780.829771 1559.64499 67881.86 0.57516 0.0004491 -0.079218 -6.1856E-05 0.49595 0.00038725 780.829717501827 784.83688907183 90.186 1.4331 90.186 89.766 91.199 0 588 92 9 0 0 0 2.4809E-19 2 49899 146.16 139.27 1 0.85723 0.71021 0 44720000 24096000 20623000 11350 1524;1266 4312 4428 17724;17725 17725 970 FNADEFEDMVAEK 13 1 0 Oxidation (M) _FNADEFEDM(ox)VAEK_ FNADEFEDM(1)VAEK FNADEFEDM(100.93)VAEK 0 1 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 781.3322 2 780.829771 1559.64499 68719.3 1.1095 0.00086635 -0.2106 -0.00016444 0.89893 0.00070191 780.829512849818 784.836856438546 113.56 0.81429 113.56 113.3 114.12 7.6294E-06 230 38 9 0 0 0 4.5135E-06 2 66173 100.93 97.812 1 1.2269 0.95315 0 14980000 6743000 8236600 11351 1524;1266 4312 4428 17726;17727 17727 970 FNADEFEDMVAEK 13 1 0 Oxidation (M) _FNADEFEDM(ox)VAEK_ FNADEFEDM(1)VAEK FNADEFEDM(86.46)VAEK 0 1 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.8375 2 780.829771 1559.64499 67376.6 0.35839 0.00027984 -0.054446 -4.2513E-05 0.30394 0.00023733 780.829797198771 784.836981942491 89.403 0.76643 89.403 89.113 89.879 0 367 48 10 0 0 0 7.6596E-05 2 48486 86.463 79.335 1 0.87242 0.73009 0 45191000 24355000 20836000 11352 1524;1266 4312 4428 17728;17729 17729 970 FNADEFEDMVAEK 13 1 0 Oxidation (M) _FNADEFEDM(ox)VAEK_ FNADEFEDM(1)VAEK FNADEFEDM(93.84)VAEK 0 1 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.8297 2 780.829771 1559.64499 68133.13 0.44487 0.00034737 -0.080748 -6.305E-05 0.36412 0.00028431 780.829747408765 784.836915382827 90.267 1.3773 90.267 89.827 91.204 0 523 85 10 0 0 0 4.1099E-05 4 49095 93.839 90.72 1 0.82068 0.68535 0 42908000 23863000 19045000 11353 1524;1266 4312 4428 17730;17731;17732;17733 17731 970 FNADEFEDMVAEK 13 1 0 Unmodified _FNADEFEDMVAEK_ 0 0 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.8384 2 772.832314 1543.65007 70686.27 1.0511 0.00081231 -0.17885 -0.00013822 0.87222 0.00067408 772.832275887656 776.839059703073 100.95 0.64653 100.95 100.7 101.35 0 209 47 7 0 0 0 9.654E-05 2 62048 92.866 92.866 1 0.686 0.69669 0 27841000 15331000 12511000 11354 1524;1266 4312 4429 17734;17735 17734 FNADEFEDMVAEK 13 1 0 Unmodified _FNADEFEDMVAEK_ 0 0 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.8334 2 772.832314 1543.65007 70072.45 0.73295 0.00056645 0.078986 6.1043E-05 0.81194 0.00062749 773.333963692456 776.839262992906 100.3 0.59073 100.3 100.04 100.63 0 203 49 6 0 0 0 0.0003313 2 63072 64.121 64.121 1 0.65787 0.71353 0 39068000 23642000 15426000 11355 1524;1266 4312 4429 17736;17737 17736 FNADEFEDMVAEK 13 1 0 Unmodified _FNADEFEDMVAEK_ 0 0 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.8405 2 772.832314 1543.65007 68465.05 1.1791 0.00091126 -0.19658 -0.00015192 0.98254 0.00075934 772.832271163246 776.839305982248 113.55 1.1322 113.55 113.27 114.4 0 276 52 8 0 0 0 0.0014983 3 66063 57.583 57.583 1 1.2216 0.99288 0 28839000 13014000 15825000 11356 1524;1266 4312 4429 17738;17739;17740 17739 FNADEFEDMVAEK 13 1 0 Unmodified _FNADEFEDMVAEK_ 0 0 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.8331 2 772.832314 1543.65007 69135.33 0.81932 0.0006332 -0.29001 -0.00022413 0.52931 0.00040907 772.832120922048 776.839231012134 113.64 1.6461 113.64 113.3 114.95 -7.6294E-06 413 74 9 0 0 0 0.00024044 2 65215 68.536 68.536 1 1.3178 1.0587 0 16006000 7163400 8842100 11357 1524;1266 4312 4429 17741;17742 17742 FNAHGDANTIVCNSK 15 1 0 Unmodified _FNAHGDANTIVCNSK_ 0 0 0 P09382 P09382 P09382 LGALS1 Galectin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.5944 3 549.922978 1646.7471 81194.64 0.25486 0.00014015 -0.025939 -1.4265E-05 0.22892 0.00012589 550.257384911746 552.59443978245 30.214 0.48799 30.214 29.945 30.433 0 150 40 6 0 0 0 6.9642E-05 1 14735 58.83 58.83 1 7.9383 8.2477 0 24642000 4114200 20528000 11358 1460 4313 4430 17743 17743 FNALFAQGNYSEAAK 15 1 0 Unmodified _FNALFAQGNYSEAAK_ 0 0 0 A0A087WVQ6;Q00610 A0A087WVQ6 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.9032 2 815.896637 1629.77872 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.69 1 81.69 81.19 82.19 -7.6294E-06 0 0 0 0.012338 1 48710 45.433 32.005 1 11359 419 4314 4431 17744 17744 FNALFAQGNYSEAAK 15 1 0 Unmodified _FNALFAQGNYSEAAK_ 0 0 0 A0A087WVQ6;Q00610 A0A087WVQ6 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.9045 2 815.896637 1629.77872 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.706 1 80.706 80.206 81.206 7.6294E-06 0 0 0 9.8416E-05 1 49212 90.653 73.18 1 11360 419 4314 4431 17745 17745 FNALITTYEILLK 13 1 0 Unmodified _FNALITTYEILLK_ 0 0 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.9519 2 769.945067 1537.87558 NaN NaN NaN 0.43964 0.0003385 NaN NaN NaN NaN 133.05 0.28307 133.05 132.91 133.19 0 0 0 0 0.0049438 1 86978 59.542 45.384 1 NaN NaN 0 1507200 0 1507200 11361 354 4315 4432 17746 17746 FNALITTYEILLK 13 1 0 Unmodified _FNALITTYEILLK_ 0 0 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.4468 2 769.945067 1537.87558 72986.05 0.99544 0.00076643 0.12397 9.5452E-05 1.1194 0.00086188 770.446242514907 773.952174193074 132.62 0.45966 132.62 132.36 132.82 0 62 26 4 0 0 0 0.028284 1 88903 33.961 33.961 1 0.88713 0.96088 0 3568600 1926700 1641900 11362 354 4315 4432 17747 17747 FNAPGAQQFCFLLSTR 16 0 1 Unmodified _FNAPGAQQFCFLLSTR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;B3KRD4;F6T542;Q12873;B4DLC6 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 933.9645 2 928.959246 1855.90394 62971.82 0.65933 0.00061249 -0.8785 -0.00081609 -0.21917 -0.0002036 928.959698455091 933.963776796334 130.93 0.6644 130.93 130.5 131.17 0 185 30 10 0 0 0 3.4261E-06 2 79415 89.231 83.507 1 1.3489 1.1017 0 14248000 6418900 7829100 11363 515;1701 4316 4433 17748;17749 17748 FNAPGAQQFCFLLSTR 16 0 1 Unmodified _FNAPGAQQFCFLLSTR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;B3KRD4;F6T542;Q12873;B4DLC6 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 933.9641 2 928.959246 1855.90394 63949.26 0.85003 0.00078964 -1.4809 -0.0013757 -0.63088 -0.00058606 929.958317840473 933.963528432863 130.74 0.62479 130.74 130.4 131.02 0 176 26 11 0 0 0 0.00015253 1 78290 66.004 62.288 1 1.2366 1.0787 0 28268000 14283000 13984000 11364 515;1701 4316 4433 17750 17750 FNASQLITQR 10 0 1 Unmodified _FNASQLITQR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.3204 2 589.319837 1176.62512 78389.82 0.43337 0.0002554 0.11622 6.849E-05 0.54959 0.00032389 589.3198908246 594.323989859559 74.747 1.1254 74.747 74.312 75.438 0 445 91 7 0 0 0 9.0893E-12 2 43724 139.78 128.42 1 1.5345 1.8145 0 267660000 106970000 160690000 11365 1328 4317 4434 17751;17752 17752 FNASQLITQR 10 0 1 Unmodified _FNASQLITQR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.3197 2 589.319837 1176.62512 78569.41 0.46002 0.0002711 0.14531 8.5633E-05 0.60533 0.00035673 589.319891508353 594.324011872705 73.471 1.1093 73.471 73.136 74.245 0 480 92 8 0 0 0 3.8685E-16 2 44021 154.05 154.05 1 1.4883 1.7285 0 352650000 136280000 216370000 11366 1328 4317 4434 17753;17754 17754 FNASQLITQR 10 0 1 Unmodified _FNASQLITQR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.3246 2 589.319837 1176.62512 79204.49 0.49179 0.00028982 0.16737 9.8635E-05 0.65916 0.00038846 589.320109484711 594.323909930314 85.605 0.91148 85.605 85.239 86.151 0 240 57 7 0 0 0 0.013721 1 46711 49.35 49.35 1 2.5163 2.1251 0 29608000 8127800 21480000 11367 1328 4317 4434 17755 17755 FNASQLITQR 10 0 1 Unmodified _FNASQLITQR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.3202 2 589.319837 1176.62512 79081.63 0.5911 0.00034835 0.1474 8.6866E-05 0.7385 0.00043521 589.320171540895 594.323892116449 85.732 0.89865 85.732 85.372 86.271 0 183 50 5 0 0 0 0.011609 1 46209 51.762 47.714 1 2.4566 2.1429 0 28556000 8346400 20209000 11368 1328 4317 4434 17756 17756 FNDIHVPVR 9 0 1 Unmodified _FNDIHVPVR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 366.5357 3 366.201452 1095.58253 101251.8 0.28011 0.00010258 -0.48148 -0.00017632 -0.20137 -7.3743E-05 366.201204970108 369.537315810104 50.418 0.21733 50.418 50.356 50.573 0 64 19 4 0 0 0 0.03042 1 28466 30.797 30.797 1 0.68465 0.67394 0 13284000 7604300 5680000 11369 1270 4318 4435 17757 17757 FNDSEGDDTEETEDYR 16 0 1 Unmodified _FNDSEGDDTEETEDYR_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 961.3635 2 961.363946 1920.71334 63147.81 0.27022 0.00025978 0.24013 0.00023086 0.51036 0.00049064 961.865276081522 966.368393110045 36.679 0.46571 36.679 36.441 36.907 0 179 42 6 0 0 0 2.045E-17 3 18514 128.31 128.31 1 1.3358 1.3615 0 18645000 7762600 10883000 11370 2083 4319 4436 17758;17759;17760 17759 FNDSEGDDTEETEDYR 16 0 1 Unmodified _FNDSEGDDTEETEDYR_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.3673 2 961.363946 1920.71334 62968.93 0.59611 0.00057308 -0.14758 -0.00014188 0.44853 0.0004312 961.865019070393 966.368041391342 35.892 0.45863 35.892 35.644 36.102 3.8147E-06 182 36 6 0 0 0 1.8174E-24 2 18249 138.02 138.02 1 1.3612 1.4405 0 23661000 11733000 11928000 11371 2083 4319 4436 17761;17762 17762 FNECGHVLYADIK 13 1 0 Unmodified _FNECGHVLYADIK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.2594 3 522.585414 1564.73441 83739.6 0.25877 0.00013523 0.028842 1.5072E-05 0.28761 0.0001503 522.585455575648 525.256919633808 64.469 0.87315 64.469 64.065 64.938 0 430 75 9 0 0 0 0.0024556 1 36840 44.457 44.457 1 1.3025 1.4656 0 72243000 32891000 39352000 11372 1599 4320 4437 17763 17763 FNECGHVLYADIK 13 1 0 Unmodified _FNECGHVLYADIK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.5917 3 522.585414 1564.73441 83495.51 0.35738 0.00018676 -0.32269 -0.00016863 0.034697 1.8132E-05 522.585348512857 525.256465980918 62.472 0.85254 62.472 61.983 62.835 0 369 79 6 0 0 0 4.5251E-05 1 36556 83.692 70.555 1 1.4321 1.6151 0 66891000 33032000 33859000 11373 1599 4320 4437 17764 17764 FNECGHVLYADIK 13 1 0 Unmodified _FNECGHVLYADIK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.2569 3 522.585414 1564.73441 82677.59 0.30033 0.00015695 -0.14436 -7.544E-05 0.15597 8.151E-05 522.585374256817 525.256765383536 73.385 0.94629 73.385 73.132 74.078 0 377 68 8 0 0 0 0.011733 1 38763 31.827 18.691 1 1.0678 0.83645 0 11597000 5709200 5887500 11374 1599 4320 4437 17765 17765 FNECGHVLYADIK 13 1 0 Unmodified _FNECGHVLYADIK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.2568 3 522.585414 1564.73441 83223.91 0.28696 0.00014996 -0.11642 -6.0837E-05 0.17055 8.9126E-05 522.585419666069 525.256782170768 73.735 0.88416 73.735 73.526 74.41 0 315 63 9 0 0 0 0.0043263 1 38200 37.594 24.457 1 1.0232 0.84339 0 12073000 5704600 6368400 11375 1599 4320 4437 17766 17766 FNEEHIPDSPFVVPVASPSGDAR 23 0 1 Unmodified _FNEEHIPDSPFVVPVASPSGDAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5C6;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.405 3 823.067794 2466.18155 67273.64 0.97835 0.00080525 0.084616 6.9645E-05 1.063 0.0008749 823.40254340772 826.738114630375 104.65 0.65723 104.65 104.35 105.01 7.6294E-06 302 51 8 0 0 0 8.7299E-06 1 66225 41.911 41.911 1 1.2404 1.3527 0 29626000 13581000 16045000 11376 1504 4321 4438 17767 17767 FNEENYGVK 9 1 0 Unmodified _FNEENYGVK_ 0 0 0 A0A024QZC0;A0A024QZB7;A0A024QZ91;Q8WWM7;H3BSK9;H3BUF6 A0A024QZC0 A0A024QZC0 ATXN2L Ataxin-2-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.264 2 550.256371 1098.49819 NaN NaN NaN 0.049777 2.739E-05 NaN NaN NaN NaN 34.246 0.28955 34.246 34.132 34.421 0 0 0 0 0.0073007 1 17305 70.525 41.187 1 NaN NaN 0 6445300 0 6445300 11377 14 4322 4439 17768 17768 FNETLMK 7 1 0 Oxidation (M) _FNETLM(ox)K_ FNETLM(1)K FNETLM(75.24)K 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.7274 2 449.720578 897.426604 89770.24 -0.036348 -1.6347E-05 0.07902 3.5537E-05 0.042672 1.919E-05 449.720314756046 453.727795711195 27.788 0.71001 27.788 27.3 28.01 -1.9073E-06 108 38 6 0 0 0 0.012913 1 13042 75.243 59.804 1 1.4124 1.5918 0 60470000 24436000 36034000 11378 486 4323 4440 17769 17769 331 FNFFVNK 7 1 0 Unmodified _FNFFVNK_ 0 0 0 A8K0P8;Q68CQ4;B3KVX2 A8K0P8 A8K0P8 DIEXF Digestive organ expansion factor homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.2467 2 458.239796 914.465038 94697.37 0.43197 0.00019795 -0.080758 -3.7007E-05 0.35122 0.00016094 458.239743054619 462.246731500161 85.152 0.49669 85.152 84.902 85.398 0 115 41 4 0 0 0 0.026734 1 51166 77.496 67.979 1 0.92585 0.94198 0 14009000 7374400 6635000 11379 699 4324 4441 17770 17770 FNFGEEEFK 9 1 0 Unmodified _FNFGEEEFK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.759 2 573.758746 1145.50294 79903.1 0.83133 0.00047698 -0.15919 -9.1337E-05 0.67214 0.00038565 573.758482849055 577.765702690683 80.123 0.73788 80.123 79.885 80.623 -7.6294E-06 265 62 6 0 0 0 0.00028235 2 47599 103.56 86.178 1 1.2789 1.4289 0 63072000 23067000 40005000 11380 452 4325 4442 17771;17772 17772 FNFGEEEFK 9 1 0 Unmodified _FNFGEEEFK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.7676 2 573.758746 1145.50294 81057.95 0.67657 0.00038819 0.16605 9.5275E-05 0.84263 0.00048346 573.75865228651 577.765859279368 79.152 0.69202 79.152 78.799 79.491 0 288 60 8 0 0 0 0.00033619 2 47957 101.64 84.867 1 1.2847 1.45 0 65371000 29988000 35383000 11381 452 4325 4442 17773;17774 17773 FNFGEEEFK 9 1 0 Unmodified _FNFGEEEFK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.7665 2 573.758746 1145.50294 79464.44 0.53021 0.00030421 0.21955 0.00012597 0.74976 0.00043018 573.757741662494 577.765858146389 91.914 0.74858 91.914 91.623 92.371 -7.6294E-06 205 46 7 0 0 0 0.0016671 1 51006 82.426 68.269 1 2.1089 1.6609 0 5713800 1773500 3940400 11382 452 4325 4442 17775 17775 FNFGEEEFK 9 1 0 Unmodified _FNFGEEEFK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.7579 2 573.758746 1145.50294 78468.75 0.34839 0.00019989 0.4088 0.00023455 0.75719 0.00043445 573.757913208029 577.765964532485 91.806 0.74606 91.806 91.51 92.256 0 198 44 7 0 0 0 0.063863 1 50231 35.445 28.995 1 2.0002 1.6314 0 5851000 2301100 3549900 11383 452 4325 4442 17776 17776 FNHPVEVQK 9 1 0 Unmodified _FNHPVEVQK_ 0 0 0 Q15058 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.2979 2 549.290548 1096.56654 NaN NaN NaN 1.0902 0.00059882 NaN NaN NaN NaN 21.412 0.21666 21.412 21.306 21.523 0 0 0 0 0.002116 1 7717 82.426 51.122 1 NaN NaN 0 2239900 0 2239900 11384 1751 4326 4443 17777 17777 FNHPVEVQK 9 1 0 Unmodified _FNHPVEVQK_ 0 0 0 Q15058 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.298 2 549.290548 1096.56654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.135 1 21.135 20.635 21.635 0 0 0 0 0.0010628 1 7328 96.668 61.312 1 11385 1751 4326 4443 17778 17778 FNILGTNTK 9 1 0 Unmodified _FNILGTNTK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.2846 2 504.279649 1006.54475 NaN NaN NaN -1.2795 -0.00064522 NaN NaN NaN NaN 69.799 0.34846 69.799 69.56 69.908 0 0 0 0 0.0071925 1 40557 70.747 45.657 1 NaN NaN 0 5222000 0 5222000 11386 1015 4327 4444 17779 17779 FNIPPSTLSTILK 13 1 0 Unmodified _FNIPPSTLSTILK_ 0 0 0 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.9252 2 715.91631 1429.81807 72634.98 1.0465 0.0007492 -0.043019 -3.0798E-05 1.0035 0.0007184 715.916107261617 719.92327121623 118.19 0.93358 118.19 117.68 118.61 -7.6294E-06 299 55 8 0 0 0 0.010561 2 75510 41.54 34.755 1 1.1195 1.1003 0 23449000 11468000 11980000 11387 1450 4328 4445 17780;17781 17780 FNIPPSTLSTILK 13 1 0 Unmodified _FNIPPSTLSTILK_ 0 0 0 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.9171 2 715.91631 1429.81807 72200.56 0.93091 0.00066645 0.20764 0.00014865 1.1385 0.0008151 715.91618604066 719.923376489443 117.65 0.93102 117.65 117.16 118.09 7.6294E-06 265 60 5 0 0 0 0.0012244 1 77007 58.699 53.158 1 1.1342 1.1428 0 27927000 12472000 15455000 11388 1450 4328 4445 17782 17782 FNIPPSTLSTILK 13 1 0 Unmodified _FNIPPSTLSTILK_ 0 0 0 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 716.4183 2 715.91631 1429.81807 71927.46 1.0576 0.00075714 -0.056717 -4.0605E-05 1.0009 0.00071653 715.916183998338 719.92333086521 130.48 1.1181 130.48 129.75 130.87 0 235 44 8 0 0 0 0.0001891 1 78045 71.03 71.03 1 1.7538 1.4311 0 6263000 2173500 4089500 11389 1450 4328 4445 17783 17783 FNISTDRR 8 0 2 Unmodified _FNISTDRR_ 0 0 1 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 336.8462 3 336.845557 1007.51484 104875 0.37289 0.00012561 0.2714 9.1419E-05 0.64429 0.00021703 336.845735328236 343.517788050863 25.555 0.20657 25.555 25.441 25.647 1.9073E-06 29 8 5 0 0 0 0.010526 1 11181 50.127 29.606 1 2.898 3.2019 0 22337000 4288000 18049000 11390 42 4329 4446 17784 17784 FNLILR 6 0 1 Unmodified _FNLILR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 388.2446 2 388.244881 774.475209 95447.87 0.32473 0.00012608 -0.16094 -6.2482E-05 0.1638 6.3594E-05 388.244712235354 393.248850086005 87.076 0.34188 87.076 86.876 87.218 0 82 25 7 0 0 0 0.010919 1 52522 136.29 64.643 1 1.8725 2.2105 0 249080000 86598000 162480000 11391 1580 4330 4447 17785 17785 FNLILR 6 0 1 Unmodified _FNLILR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 388.2455 2 388.244881 774.475209 96048.95 0.52452 0.00020364 -0.053952 -2.0947E-05 0.47057 0.0001827 388.244767914847 393.248896995106 85.925 0.24476 85.925 85.786 86.031 0 89 17 7 0 0 0 0.010919 1 52908 136.29 64.643 1 1.7765 2.0572 0 282510000 97763000 184740000 11392 1580 4330 4447 17786 17786 FNLTGLNEQVPHYR 14 0 1 Unmodified _FNLTGLNEQVPHYR_ 0 0 0 N0E4C7;Q5SRQ6;P67870;N0E466;Q5SRQ3;N0E472;A0A0G2JM12;N0E650;N0E638;N0E6J1;B4DUJ4;N0E644;A0A0G2JM58 N0E4C7 N0E4C7 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991;CSNK2B-LY6G5B-1072;CSNK2B-LY6G5B-560;CSNK2B-LY6G5B-562 Casein kinase II subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.6266 3 563.289878 1686.8478 80984.28 0.82353 0.00046388 -0.15068 -8.4877E-05 0.67284 0.00037901 563.289919591165 566.625895414739 84.982 0.66165 84.982 84.615 85.277 0 315 54 8 0 0 0 0.0062249 1 50823 32.734 32.734 1 1.055 1.0847 0 36464000 16152000 20312000 11393 1358 4331 4448 17787 17787 FNLTGLNEQVPHYR 14 0 1 Unmodified _FNLTGLNEQVPHYR_ 0 0 0 N0E4C7;Q5SRQ6;P67870;N0E466;Q5SRQ3;N0E472;A0A0G2JM12;N0E650;N0E638;N0E6J1;B4DUJ4;N0E644;A0A0G2JM58 N0E4C7 N0E4C7 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991;CSNK2B-LY6G5B-1072;CSNK2B-LY6G5B-560;CSNK2B-LY6G5B-562 Casein kinase II subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.9614 3 563.289878 1686.8478 80940.31 0.92745 0.00052242 -0.31804 -0.00017915 0.60941 0.00034327 563.289733263201 566.960110837287 83.682 0.62297 83.682 83.415 84.038 0 314 52 8 0 0 0 2.8778E-05 3 51261 72.681 72.681 1 1.0898 1.1897 0 29978000 13630000 16349000 11394 1358 4331 4448 17788;17789;17790 17789 FNLTGLNEQVPHYR 14 0 1 Unmodified _FNLTGLNEQVPHYR_ 0 0 0 N0E4C7;Q5SRQ6;P67870;N0E466;Q5SRQ3;N0E472;A0A0G2JM12;N0E650;N0E638;N0E6J1;B4DUJ4;N0E644;A0A0G2JM58 N0E4C7 N0E4C7 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991;CSNK2B-LY6G5B-1072;CSNK2B-LY6G5B-560;CSNK2B-LY6G5B-562 Casein kinase II subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.6245 3 563.289878 1686.8478 79915.35 0.79237 0.00044634 0.0014393 8.1072E-07 0.79381 0.00044715 563.62427570834 566.625959602824 97.355 0.36783 97.355 97.159 97.527 -7.6294E-06 91 17 6 0 0 0 0.00026391 2 54763 46.964 46.964 1 0.5378 0.46176 0 8154900 4905300 3249600 11395 1358 4331 4448 17791;17792 17792 FNLTYVSHDGDDK 13 1 0 Unmodified _FNLTYVSHDGDDK_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.9034 3 504.231805 1509.67359 NaN NaN NaN -0.044959 -2.267E-05 NaN NaN NaN NaN 54.734 0.29659 54.734 54.57 54.866 0 0 0 0 0.04548 1 31307 28.812 23.635 1 NaN NaN 0 7925000 0 7925000 11396 892 4332 4449 17793 17793 FNNFLK 6 1 0 Unmodified _FNNFLK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 395.72 2 391.713414 781.412274 93778.65 0.26333 0.00010315 -0.029849 -1.1692E-05 0.23348 9.1459E-05 391.713344113284 395.720395752187 53.676 0.81827 53.676 53.443 54.261 0 275 63 7 0 0 0 0.036258 2 30003 126.07 0 1 0.3691 0.43949 0 637590000 473360000 164240000 11397 1476 4333 4450 17794;17795 17795 FNNFLK 6 1 0 Unmodified _FNNFLK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 391.7132 2 391.713414 781.412274 93939.03 0.33245 0.00013023 -0.17376 -6.8064E-05 0.1587 6.2163E-05 391.713289077831 395.720288520163 52.244 0.84198 52.244 52.017 52.859 0 344 64 9 0 0 0 0.036344 2 29662 126.07 0 1 0.38604 0.45479 0 546270000 397130000 149140000 11398 1476 4333 4450 17796;17797 17796 FNPFVTSDR 9 0 1 Unmodified _FNPFVTSDR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;J3KSS0;E5RIT6;Q9UNX3;E5RHH1 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.7717 2 541.766906 1081.51926 81793.66 0.77309 0.00041884 -0.086674 -4.6957E-05 0.68642 0.00037188 541.766917798875 546.770894063237 70.527 1.3709 70.527 69.976 71.347 0 726 116 9 0 0 0 0.0032669 2 40790 72.23 60.461 1 0.82759 0.98207 0 720310000 387470000 332850000 11399 1629;1214 4334 4451 17798;17799 17798 FNPFVTSDR 9 0 1 Unmodified _FNPFVTSDR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;J3KSS0;E5RIT6;Q9UNX3;E5RHH1 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.7716 2 541.766906 1081.51926 81498.86 0.54483 0.00029517 -0.048949 -2.6519E-05 0.49588 0.00026865 541.766942606912 546.770937845225 69.28 1.3098 69.28 68.739 70.049 0 679 110 9 0 0 0 2.5787E-05 3 41207 113.26 86.654 1 0.84685 0.99326 0 780060000 419500000 360560000 11400 1629;1214 4334 4451 17800;17801;17802 17800 FNPFVTSDR 9 0 1 Unmodified _FNPFVTSDR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;J3KSS0;E5RIT6;Q9UNX3;E5RHH1 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.7714 2 541.766906 1081.51926 81544.49 0.43487 0.0002356 0.34348 0.00018609 0.77835 0.00042169 541.767075920889 546.771118511991 80.273 3.0009 80.273 79.611 82.611 0 721 190 9 0 0 0 0.014775 2 43151 55.37 44.301 1 0.62388 0.53901 0 99511000 61071000 38440000 11401 1629;1214 4334 4451 17803;17804 17804 FNPFVTSDR 9 0 1 Unmodified _FNPFVTSDR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;J3KSS0;E5RIT6;Q9UNX3;E5RHH1 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.7676 2 541.766906 1081.51926 NaN NaN NaN 0.27265 0.00014771 NaN NaN NaN NaN 80.469 2.0983 80.469 79.931 82.029 0 0 0 0 0.04166 1 42887 49.715 40.943 1 NaN NaN 0 56812000 56812000 0 11402 1629;1214 4334 4451 17805 17805 FNPIETFLLGSCASDR 16 0 1 Unmodified _FNPIETFLLGSCASDR_ 0 0 0 A0A087WT20;Q9NV06;A0A087X1F8 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 913.942 2 913.940718 1825.86688 63787.86 0.60013 0.00054849 0.10261 9.3779E-05 0.70274 0.00064227 914.442567647351 918.945310509731 128.61 0.43066 128.61 128.36 128.79 0 204 27 9 0 0 0 0.00016796 1 83754 61.375 61.375 1 0.84843 0.86107 0 28942000 15623000 13318000 11403 402 4335 4452 17806 17806 FNPIETFLLGSCASDR 16 0 1 Unmodified _FNPIETFLLGSCASDR_ 0 0 0 A0A087WT20;Q9NV06;A0A087X1F8 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.9413 2 913.940718 1825.86688 62935.93 0.80856 0.00073898 0.00018992 1.7357E-07 0.80875 0.00073915 913.941049092814 918.945404614936 128.25 0.47159 128.25 127.96 128.43 0 207 29 9 0 0 0 0.00015523 1 85550 72.089 72.089 1 0.83763 0.91576 0 35643000 19428000 16215000 11404 402 4335 4452 17807 17807 FNQAQSGNIQSTVMLDK 17 1 0 Oxidation (M) _FNQAQSGNIQSTVM(ox)LDK_ FNQAQSGNIQSTVM(1)LDK FNQAQSGNIQSTVM(85.55)LDK 0 1 0 J3KPM9;P42224;E7EPD2;D2KFR9;E7ENM1;A5D905 J3KPM9 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 952.9665 2 948.959639 1895.90473 NaN NaN NaN -0.23614 -0.00022408 NaN NaN NaN NaN 64.576 0.42428 64.576 64.389 64.813 0 0 0 0 2.6212E-07 2 37055 85.554 76.825 1 NaN NaN 0 5646900 0 5646900 11405 1326 4336 4453 17808;17809 17808 1002 FNQAQSGNIQSTVMLDK 17 1 0 Oxidation (M) _FNQAQSGNIQSTVM(ox)LDK_ FNQAQSGNIQSTVM(1)LDK FNQAQSGNIQSTVM(69.03)LDK 0 1 0 J3KPM9;P42224;E7EPD2;D2KFR9;E7ENM1;A5D905 J3KPM9 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 952.9653 2 948.959639 1895.90473 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.305 1 63.305 62.805 63.805 0 0 0 0 0.00018168 1 37194 69.03 55.351 1 11406 1326 4336 4453 17810 17810 1002 FNQLVEQYK 9 1 0 Unmodified _FNQLVEQYK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.8035 2 584.803488 1167.59242 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.123 1 53.123 52.623 53.623 3.8147E-06 0 0 0 8.446E-23 1 29663 167.24 114.53 1 11407 214 4337 4454 17811 17811 FNQLVEQYK 9 1 0 Unmodified _FNQLVEQYK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.8103 2 584.803488 1167.59242 NaN NaN NaN -0.27005 -0.00015792 NaN NaN NaN NaN 51.821 0.76335 51.821 51.567 52.33 0 0 0 0 1.9914E-07 1 29344 123.98 113.27 1 NaN NaN 0 31797000 0 31797000 11408 214 4337 4454 17812 17812 FNQLVEQYK 9 1 0 Unmodified _FNQLVEQYK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8037 2 584.803488 1167.59242 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.839 1 51.839 51.339 52.339 -3.8147E-06 0 0 0 0.0016659 1 29451 91.318 41.278 1 11409 214 4337 4454 17813 17813 FNQLVEQYK 9 1 0 Unmodified _FNQLVEQYK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.8035 2 584.803488 1167.59242 78754 0.32138 0.00018794 -0.46879 -0.00027415 -0.14741 -8.6208E-05 584.803219476135 588.810535382564 62.351 1.2562 62.351 61.618 62.874 0 409 90 6 0 0 0 0.012671 1 31185 68.625 68.625 1 1.1087 0.90867 0 5023300 2487900 2535400 11410 214 4337 4454 17814 17814 FNQTYQLAHGTAEEK 15 1 0 Unmodified _FNQTYQLAHGTAEEK_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.2831 3 579.612797 1735.81656 78188.77 0.73925 0.00042848 -0.18234 -0.00010568 0.55691 0.00032279 579.946493207714 582.284176389001 36.139 0.27789 36.139 35.967 36.245 0 93 25 5 0 0 0 0.00020627 2 18214 52.522 49.066 1 1.3949 1.4607 0 15162000 4538200 10624000 11411 161 4338 4455 17815;17816 17815 FNQTYQLAHGTAEEK 15 1 0 Unmodified _FNQTYQLAHGTAEEK_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.9156 2 868.915558 1735.81656 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.051 1 35.051 34.551 35.551 0 0 0 0 8.3378E-07 1 17826 95.417 79.528 1 11412 161 4338 4455 17817 17817 FNQVLGDDEK 10 1 0 Unmodified _FNQVLGDDEK_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.7881 2 582.78021 1163.54587 79946.46 0.4171 0.00024308 -0.25279 -0.00014732 0.16432 9.576E-05 582.779965428875 586.786879832646 40.139 0.41727 40.139 39.847 40.264 0 89 33 4 0 0 0 0.0043374 1 20854 61.65 53.467 1 0.76437 0.79369 0 11391000 6135000 5256200 11413 1270 4339 4456 17818 17818 FNSVAGHFFFPLLQR 15 0 1 Unmodified _FNSVAGHFFFPLLQR_ 0 0 0 B3KMG2;Q9Y4R8 B3KMG2 B3KMG2 TELO2 Telomere length regulation protein TEL2 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.3191 3 593.982496 1778.92566 NaN NaN NaN -0.1397 -8.2977E-05 NaN NaN NaN NaN 119.11 0.39488 119.11 118.96 119.36 0 0 0 0 0.0038197 1 78452 48.704 44.524 1 NaN NaN 0 3486000 0 3486000 11414 904 4340 4457 17819 17819 FNTGPVGK 8 1 0 Unmodified _FNTGPVGK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.229 2 410.221603 818.428653 91422.54 -0.10104 -4.145E-05 0.52999 0.00021741 0.42895 0.00017596 410.221854551808 414.22870351228 27.032 0.40332 27.032 26.806 27.209 -1.9073E-06 80 22 6 0 0 0 0.012693 1 12314 67.032 50.105 1 0.7808 0.85228 0 50506000 27937000 22569000 11415 1854 4341 4458 17820 17820 FNTGPVGK 8 1 0 Unmodified _FNTGPVGK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.2215 2 410.221603 818.428653 94670.61 0.16575 6.7996E-05 0.37398 0.00015342 0.53974 0.00022141 410.221767529868 414.228639330338 26.636 0.44396 26.636 26.418 26.862 0 75 22 6 0 0 0 0.0071364 2 12081 84.244 67.317 1 0.78317 0.86923 0 48818000 22560000 26258000 11416 1854 4341 4458 17821;17822 17822 FNTTSVIK 8 1 0 Unmodified _FNTTSVIK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.2554 2 455.255643 908.496732 88449.33 0.33701 0.00015343 0.04386 1.9967E-05 0.38087 0.0001734 455.255409466408 459.262873446539 46.605 0.68111 46.605 46.109 46.79 0 165 53 5 0 0 0 0.0088675 2 25717 76.774 48.351 1 0.8865 0.99115 0 106050000 60460000 45592000 11417 794 4342 4459 17823;17824 17823 FNVEDGEIVQQVR 13 0 1 Unmodified _FNVEDGEIVQQVR_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.8942 2 766.888812 1531.76307 68827.91 0.83808 0.00064271 0.43972 0.00033722 1.2778 0.00097993 766.889325753004 771.892947605716 82.39 0.67784 82.39 81.977 82.655 0 241 57 6 0 0 0 0.0001218 2 49060 77.379 66.792 1 0.61738 0.64268 0 21854000 13239000 8614600 11418 1913 4343 4460 17825;17826 17826 FNVEDGEIVQQVR 13 0 1 Unmodified _FNVEDGEIVQQVR_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.3964 2 766.888812 1531.76307 68084.66 0.84521 0.00064818 -0.080829 -6.1987E-05 0.76438 0.0005862 767.390437217362 771.892513111875 81.389 0.60406 81.389 81.122 81.726 0 169 50 5 0 0 0 0.00032476 1 49801 64.439 56.341 1 0.66407 0.71621 0 26206000 14576000 11630000 11419 1913 4343 4460 17827 17827 FNVEDGEIVQQVR 13 0 1 Unmodified _FNVEDGEIVQQVR_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 766.8894 2 766.888812 1531.76307 70309.54 0.70724 0.00054237 0.20744 0.00015908 0.91468 0.00070146 766.888578494922 771.893921669402 94.523 0.5376 94.523 94.244 94.781 7.6294E-06 115 32 5 0 0 0 0.00013248 2 52885 73.781 67.092 1 0.63501 0.53093 0 3636300 2020500 1615900 11420 1913 4343 4460 17828;17829 17828 FNVEDGEIVQQVR 13 0 1 Unmodified _FNVEDGEIVQQVR_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.8892 2 766.888812 1531.76307 70668.75 0.82859 0.00063544 0.0032982 2.5293E-06 0.83189 0.00063797 767.389929671466 771.893294226081 94.486 0.51265 94.486 94.238 94.751 7.6294E-06 139 31 6 0 0 0 7.7297E-05 2 52030 94.465 87.776 1 0.64093 0.56486 0 4114700 2477000 1637700 11421 1913 4343 4460 17830;17831 17830 FNVELIVQCIR 11 0 1 Unmodified _FNVELIVQCIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.3851 2 695.879204 1389.74386 74075.96 0.80058 0.00055711 -0.18911 -0.0001316 0.61147 0.00042551 695.879156315316 700.882789278663 117.98 0.52647 117.98 117.71 118.23 0 111 30 6 0 0 0 0.00026127 3 75567 90.15 90.15 1 1.1447 1.1575 0 9674000 4180200 5493800 11422 897 4344 4461 17832;17833;17834 17833 FNVELIVQCIR 11 0 1 Unmodified _FNVELIVQCIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8841 2 695.879204 1389.74386 73893.35 0.68396 0.00047595 -0.16127 -0.00011222 0.52269 0.00036373 696.381486597752 700.882792604743 117.4 0.48863 117.4 117.21 117.7 -7.6294E-06 128 28 6 0 0 0 0.00041576 1 76905 80.239 80.239 1 1.2932 1.2817 0 12115000 5231900 6882600 11423 897 4344 4461 17835 17835 FNVELIVQCIR 11 0 1 Unmodified _FNVELIVQCIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.3854 2 695.879204 1389.74386 74851.28 0.58181 0.00040487 0.10885 7.5747E-05 0.69066 0.00048061 695.879344709532 700.883269945621 130.38 0.61375 130.38 130.02 130.64 0 103 31 6 0 0 0 0.00022817 2 78951 91.584 91.584 1 1.0657 0.89492 0 4269500 1545500 2724000 11424 897 4344 4461 17836;17837 17836 FNVELIVQCIR 11 0 1 Unmodified _FNVELIVQCIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.8839 2 695.879204 1389.74386 73213.88 0.96775 0.00067343 -0.29524 -0.00020545 0.67251 0.00046798 696.380851891658 700.883119202354 130.12 0.70508 130.12 129.63 130.34 0 61 26 5 0 0 0 0.022466 2 77914 42.743 42.743 1 1.0424 0.86909 0 6424300 3256800 3167600 11425 897 4344 4461 17838;17839 17839 FNVLLTTYEYIIK 13 1 0 Unmodified _FNVLLTTYEYIIK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;A0A0U1RQE1;P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.461 2 808.950349 1615.88615 67707.29 1.0074 0.00081494 0.13765 0.00011135 1.145 0.00092629 808.950814030564 812.957684202806 132 0.63641 132 131.74 132.37 0 195 42 7 0 0 0 0.00016902 3 86179 72.006 72.006 1 0.69263 0.6976 0 7201300 3763000 3438400 11426 695;1595 4345 4462 17840;17841;17842 17840 FNVLLTTYEYIIK 13 1 0 Unmodified _FNVLLTTYEYIIK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;A0A0U1RQE1;P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.9066 2 808.950349 1615.88615 67925.63 0.98003 0.00079279 0.14361 0.00011617 1.1236 0.00090896 808.950564421413 812.957202185429 131.51 0.72276 131.51 131.19 131.91 0 199 54 6 0 0 0 0.0001172 3 88028 88.441 88.441 1 0.72991 0.75771 0 11213000 6220900 4991800 11427 695;1595 4345 4462 17843;17844;17845 17845 FNVWDTAGQEK 11 1 0 Unmodified _FNVWDTAGQEK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8071 2 647.806759 1293.59897 75796.61 0.79821 0.00051709 -0.052475 -3.3994E-05 0.74573 0.00048309 647.806536220502 651.813711346434 70.881 1.0485 70.881 70.329 71.378 0 430 86 8 0 0 0 3.2449E-10 2 41238 132.88 127.23 1 1.8784 2.1127 0 71434000 24139000 47295000 11428 1082 4346 4463 17846;17847 17847 FNVWDTAGQEK 11 1 0 Unmodified _FNVWDTAGQEK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.8069 2 647.806759 1293.59897 74820.24 0.64172 0.00041571 -0.7438 -0.00048184 -0.10208 -6.6127E-05 647.806129688405 651.813308760163 69.588 1.1137 69.588 69.282 70.395 0 444 93 8 0 0 0 0.00071156 2 41404 73.067 73.067 1 1.904 2.1394 0 73946000 27014000 46932000 11429 1082 4346 4463 17848;17849 17849 FNVWDTAGQEK 11 1 0 Unmodified _FNVWDTAGQEK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.8057 2 647.806759 1293.59897 74684.48 0.59911 0.00038811 -0.83605 -0.0005416 -0.23694 -0.00015349 647.806335906035 651.813053295591 80.956 0.9762 80.956 80.766 81.743 0 333 60 9 0 0 0 0.00013444 2 43772 95.642 95.642 1 1.2093 0.96212 0 19441000 8565800 10876000 11430 1082 4346 4463 17850;17851 17851 FNVWDTAGQEK 11 1 0 Unmodified _FNVWDTAGQEK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.8054 2 647.806759 1293.59897 75220.99 0.71588 0.00046375 -0.36525 -0.00023661 0.35063 0.00022714 647.806450249228 651.813368093876 81.22 0.78841 81.22 80.984 81.773 0 262 43 8 0 0 0 0.00045025 2 43071 77.533 77.533 1 1.4049 1.1262 0 19460000 8179500 11281000 11431 1082 4346 4463 17852;17853 17853 FNYGFEYLGVQDK 13 1 0 Unmodified _FNYGFEYLGVQDK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.3822 2 790.375006 1578.73546 NaN NaN NaN -0.31691 -0.00025048 NaN NaN NaN NaN 103.56 0.48592 103.56 103.35 103.83 0 0 0 0 0.0017464 3 63876 73.781 65.249 1 NaN NaN 0 4362400 0 4362400 11432 1729 4347 4464 17854;17855;17856 17855 FNYSVQEESDTCLGGK 16 1 0 Unmodified _FNYSVQEESDTCLGGK_ 0 0 0 Q9P287 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 921.9106 2 917.401623 1832.78869 NaN NaN NaN -0.19302 -0.00017708 NaN NaN NaN NaN 66.702 0.34279 66.702 66.594 66.937 0 0 0 0 1.5079E-08 1 38533 96.64 89.981 1 NaN NaN 0 4802500 0 4802500 11433 2094 4348 4465 17857 17857 FNYSVQEESDTCLGGK 16 1 0 Unmodified _FNYSVQEESDTCLGGK_ 0 0 0 Q9P287 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.4095 2 917.401623 1832.78869 NaN NaN NaN 0.6286 0.00057668 NaN NaN NaN NaN 65.804 0.30162 65.804 65.636 65.938 0 0 0 0 3.6738E-07 1 38782 91.961 85.858 1 NaN NaN 0 4240000 0 4240000 11434 2094 4348 4465 17858 17858 FNYSVQEESDTCLGGK 16 1 0 Unmodified _FNYSVQEESDTCLGGK_ 0 0 0 Q9P287 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 921.9122 2 917.401623 1832.78869 64240.23 0.36296 0.00033298 0.12613 0.00011571 0.4891 0.0004487 917.902997909071 921.408725738536 77.038 0.44896 77.038 76.841 77.29 0 96 29 5 0 0 0 0.0027108 1 41114 39.73 39.73 1 2.2788 1.814 0 2958200 1122100 1836100 11435 2094 4348 4465 17859 17859 FNYSVQEESDTCLGGK 16 1 0 Unmodified _FNYSVQEESDTCLGGK_ 0 0 0 Q9P287 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 917.9041 2 917.401623 1832.78869 64698.43 0.41723 0.00038276 -0.34704 -0.00031837 0.070191 6.4394E-05 917.902821110497 921.910028864741 77.493 0.43419 77.493 77.282 77.716 0 137 29 7 0 0 0 0.0015714 2 40662 44.616 44.616 1 2.4281 1.9702 0 2828400 1030100 1798300 11436 2094 4348 4465 17860;17861 17861 FPASVPTGAQDLISK 15 1 0 Unmodified _FPASVPTGAQDLISK_ 0 0 0 B2RC06 B2RC06 B2RC06 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.9128 2 765.911756 1529.80896 69394.43 0.7674 0.00058776 0.12936 9.9077E-05 0.89675 0.00068683 765.911743633593 769.918847852726 94.202 0.98615 94.202 93.801 94.787 0 598 90 11 0 0 0 2.9997E-22 2 57021 146.79 146.79 1 1.0796 1.2798 0 478710000 239250000 239460000 11437 881 4349 4466 17862;17863 17862 FPASVPTGAQDLISK 15 1 0 Unmodified _FPASVPTGAQDLISK_ 0 0 0 B2RC06 B2RC06 B2RC06 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.9197 2 765.911756 1529.80896 69815.07 0.66827 0.00051184 0.32628 0.0002499 0.99455 0.00076174 765.911859327051 769.919018045365 93.438 0.94187 93.438 93.096 94.038 0 483 84 9 0 0 0 1.9855E-15 2 57865 133.32 133.32 1 1.0847 1.2738 0 347970000 168620000 179360000 11438 881 4349 4466 17864;17865 17865 FPASVPTGAQDLISK 15 1 0 Unmodified _FPASVPTGAQDLISK_ 0 0 0 B2RC06 B2RC06 B2RC06 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.9191 2 765.911756 1529.80896 69396.74 0.74879 0.0005735 -0.023454 -1.7964E-05 0.72533 0.00055554 765.911747754978 769.918765339641 107.59 1.1133 107.59 107.26 108.38 0 372 61 11 0 0 0 4.9186E-06 1 61538 96.82 96.82 1 2.104 1.8218 0 119440000 38484000 80957000 11439 881 4349 4466 17866 17866 FPASVPTGAQDLISK 15 1 0 Unmodified _FPASVPTGAQDLISK_ 0 0 0 B2RC06 B2RC06 B2RC06 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 769.9189 2 765.911756 1529.80896 69596.8 0.7633 0.00058462 -0.057142 -4.3766E-05 0.70616 0.00054086 765.911736305361 769.918763534908 107.46 1.2141 107.46 107.11 108.33 -7.6294E-06 455 71 12 0 0 0 0.0001124 2 60540 81.709 81.709 1 2.1206 1.814 0 114750000 37659000 77089000 11440 881 4349 4466 17867;17868 17867 FPCLEEK 7 1 0 Unmodified _FPCLEEK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.7275 2 461.720578 921.426604 88639.49 0.32027 0.00014788 -0.57419 -0.00026512 -0.25392 -0.00011724 461.720138619503 465.727363732157 50.683 0.79349 50.683 50.345 51.139 -3.8147E-06 284 67 6 0 0 0 0.030461 2 28597 68.7 27.398 1 0.86876 0.99641 0 167150000 86229000 80917000 11441 2023 4350 4467 17869;17870 17870 FPCLEEK 7 1 0 Unmodified _FPCLEEK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 465.7278 2 461.720578 921.426604 88384.44 0.14725 6.7988E-05 0.072095 3.3288E-05 0.21934 0.00010128 461.720490016658 465.727572979438 59.448 1.0876 59.448 59.08 60.168 -3.8147E-06 373 78 6 0 0 0 0.047393 1 30210 56.27 30.047 1 1.3873 1.0909 0 17266000 7629500 9636800 11442 2023 4350 4467 17871 17871 FPCLEEK 7 1 0 Unmodified _FPCLEEK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 465.728 2 461.720578 921.426604 89030.16 0.071576 3.3048E-05 0.1499 6.921E-05 0.22147 0.00010226 461.720551045763 465.727591267582 59.844 1 59.844 59.473 60.473 3.8147E-06 341 73 7 0 0 0 0.047715 1 29776 56.122 22.764 1 1.4569 1.1704 0 15838000 6703800 9134000 11443 2023 4350 4467 17872 17872 FPDEDEILEK 10 1 0 Unmodified _FPDEDEILEK_ 0 0 0 Q6IBR8;B5BU01;P20042;Q96I16 Q6IBR8 Q6IBR8 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.802 2 617.795526 1233.5765 78352.52 0.57517 0.00035534 -0.084458 -5.2178E-05 0.49072 0.00030316 617.795582495733 621.802394839433 77.664 0.63148 77.664 77.35 77.981 7.6294E-06 169 52 5 0 0 0 0.012101 1 46878 51.092 51.092 1 1.6574 1.734 0 19362000 6823900 12538000 11444 1073 4351 4468 17873 17873 FPDLTVELNR 10 0 1 Unmodified _FPDLTVELNR_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3224 2 602.322045 1202.62954 NaN NaN NaN -0.28315 -0.00017055 NaN NaN NaN NaN 101.51 0.2892 101.51 101.27 101.56 0 0 0 0 0.023306 1 62362 53.756 31.608 1 NaN NaN 0 5125500 5125500 0 11445 1601 4352 4469 17874 17874 FPEILATLR 9 0 1 Unmodified _FPEILATLR_ 0 0 0 B4DSW6;A8K194;P54198 B4DSW6 B4DSW6 HIRA Protein HIRA ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.3136 2 530.313492 1058.61243 NaN NaN NaN 0.37292 0.00019777 NaN NaN NaN NaN 109.82 0.42952 109.82 109.54 109.97 0 0 0 0 0.016586 1 68796 71.692 33.454 1 NaN NaN 0 2207400 2207400 0 11446 702 4353 4470 17875 17875 FPEILATLR 9 0 1 Unmodified _FPEILATLR_ 0 0 0 B4DSW6;A8K194;P54198 B4DSW6 B4DSW6 HIRA Protein HIRA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.3137 2 530.313492 1058.61243 86115.51 0.63641 0.0003375 0.32205 0.00017079 0.95846 0.00050829 530.313556301987 535.317625326589 109.1 0.4081 109.1 108.88 109.29 0 53 29 4 0 0 0 0.0049758 2 70004 67.897 67.897 1 0.48623 0.50602 0 4468800 3057300 1411500 11447 702 4353 4470 17876;17877 17877 FPEILATLR 9 0 1 Unmodified _FPEILATLR_ 0 0 0 B4DSW6;A8K194;P54198 B4DSW6 B4DSW6 HIRA Protein HIRA MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.3145 2 530.313492 1058.61243 86208.49 0.64812 0.00034371 0.2848 0.00015103 0.93292 0.00049474 530.313588328946 535.317655574202 120.81 0.4447 120.81 120.56 121.01 -7.6294E-06 48 20 4 0 0 0 0.04753 1 70877 39.022 39.022 1 1.2601 1.1186 0 848140 344070 504070 11448 702 4353 4470 17878 17878 FPELNYQLK 9 1 0 Unmodified _FPELNYQLK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.3148 2 576.308406 1150.60226 NaN NaN NaN -0.772 -0.00044491 NaN NaN NaN NaN 89.609 0.3372 89.609 89.437 89.774 -7.6294E-06 0 0 0 0.020213 2 54075 58.716 30.79 1 NaN NaN 0 7235000 0 7235000 11449 1015 4354 4471 17879;17880 17879 FPELNYQLK 9 1 0 Unmodified _FPELNYQLK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.3151 2 576.308406 1150.60226 NaN NaN NaN -0.79514 -0.00045825 NaN NaN NaN NaN 88.647 0.48984 88.647 88.46 88.949 0 0 0 0 0.040899 1 54639 49.96 32.721 1 NaN NaN 0 11572000 0 11572000 11450 1015 4354 4471 17881 17881 FPEVIINFPDPAQK 14 1 0 Unmodified _FPEVIINFPDPAQK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.9392 2 807.929948 1613.84534 68557.5 1.1527 0.0009313 -0.11094 -8.9632E-05 1.0418 0.00084167 808.431037006524 811.937059423485 119.09 0.45953 119.09 118.91 119.37 0 131 29 8 0 0 0 1.907E-21 2 76523 147.26 147.26 1 1.8746 1.9884 0 15750000 5373500 10377000 11451 154 4355 4472 17882;17883 17883 FPEVIINFPDPAQK 14 1 0 Unmodified _FPEVIINFPDPAQK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.9384 2 807.929948 1613.84534 68832.97 0.578 0.00046698 0.22345 0.00018053 0.80145 0.00064751 808.431170838441 811.937140353653 118.67 0.41404 118.67 118.43 118.84 0 119 25 6 0 0 0 1.7081E-05 2 77992 98.105 98.105 1 1.8639 1.8776 0 27873000 9610500 18262000 11452 154 4355 4472 17884;17885 17884 FPEVIINFPDPAQK 14 1 0 Unmodified _FPEVIINFPDPAQK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.9384 2 807.929948 1613.84534 69673.73 0.91046 0.00073559 0.84784 0.00068499 1.7583 0.0014206 807.929973219761 811.937604529603 131.02 0.35292 131.02 130.87 131.22 0 46 16 5 0 0 0 0.062775 1 78594 23.754 21.342 1 1.3655 1.132 0 1580200 821410 758820 11453 154 4355 4472 17886 17886 FPGEFMK 7 1 0 Oxidation (M) _FPGEFM(ox)K_ FPGEFM(1)K FPGEFM(54.2)K 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.2115 2 436.204564 870.394575 92966.34 0.35369 0.00015428 -0.85717 -0.0003739 -0.50348 -0.00021962 436.203985870779 440.211313307674 42.636 0.77904 42.636 42.027 42.806 -3.8147E-06 231 66 4 0 0 0 0.025137 1 23096 54.205 46.975 1 1.0211 1.1429 0 83630000 45930000 37700000 11454 2148 4356 4473 17887 17887 1990 FPGQLNADLR 10 0 1 Unmodified _FPGQLNADLR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.8016 2 565.80128 1129.58801 80110.66 0.56257 0.00031831 0.076304 4.3173E-05 0.63888 0.00036148 565.80119727008 570.805442939153 73.436 2.0629 73.436 72.363 74.426 0 910 175 8 0 0 0 4.533E-41 4 43191 199.89 167.05 1 1.4089 1.661 0 242300000 95153000 147150000 11455 1452;1660;1723;1441;2004;502;1778 4357 4474 17888;17889;17890;17891 17891 FPGQLNADLR 10 0 1 Unmodified _FPGQLNADLR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.8056 2 565.80128 1129.58801 80055.87 0.59632 0.0003374 -0.094399 -5.3411E-05 0.50192 0.00028399 565.801148875675 570.805332566672 72.275 1.9645 72.275 71.352 73.317 7.6294E-06 883 167 8 0 0 0 3.2504E-14 4 43446 150.53 123.28 1 1.4172 1.6424 0 296460000 120410000 176040000 11456 1452;1660;1723;1441;2004;502;1778 4357 4474 17892;17893;17894;17895 17894 FPGQLNADLR 10 0 1 Unmodified _FPGQLNADLR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.8011 2 565.80128 1129.58801 79314.17 0.49702 0.00028122 0.4896 0.00027702 0.98662 0.00055823 565.801240970427 570.805644907377 83.855 2.3428 83.855 82.861 85.204 7.6294E-06 712 168 6 0 0 0 0.0055036 4 45910 60.064 44.913 1 1.049 0.85708 0 15854000 7809300 8044400 11457 1452;1660;1723;1441;2004;502;1778 4357 4474 17896;17897;17898;17899 17899 FPGQLNADLR 10 0 1 Unmodified _FPGQLNADLR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.8016 2 565.80128 1129.58801 79636.66 0.66541 0.00037649 0.20987 0.00011874 0.87528 0.00049524 565.801181318629 570.805572147146 83.894 1.8831 83.894 82.984 84.867 0 597 130 6 0 0 0 0.0044036 4 45179 61.56 46.409 1 1.1266 0.91975 0 12925000 6087300 6837600 11458 1452;1660;1723;1441;2004;502;1778 4357 4474 17900;17901;17902;17903 17902 FPGQLNADLRK 11 1 1 Unmodified _FPGQLNADLRK_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 420.2348 3 420.234933 1257.68297 90868.73 0.029203 1.2272E-05 -0.019035 -7.999E-06 0.010169 4.2732E-06 420.234967923387 426.242332684507 52.087 1.3931 52.087 51.522 52.915 -3.8147E-06 604 107 8 0 0 0 0.00011435 2 28885 77.062 68.576 1 1.6538 2.0041 0 273850000 98126000 175720000 11459 1452;1660;1723;1441;2004;502;1778 4358 4475 17904;17905 17904 FPGQLNADLRK 11 1 1 Unmodified _FPGQLNADLRK_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 420.2348 3 420.234933 1257.68297 90972.8 0.097259 4.0872E-05 -0.091381 -3.8401E-05 0.0058786 2.4704E-06 420.23491579647 426.242379195973 50.384 1.1202 50.384 49.914 51.034 3.8147E-06 499 97 9 0 0 0 0.0019703 2 28402 51.841 43.328 1 1.6609 1.9755 0 435080000 169950000 265130000 11460 1452;1660;1723;1441;2004;502;1778 4358 4475 17906;17907 17907 FPHLFTGK 8 1 0 Unmodified _FPHLFTGK_ 0 0 0 A0A024R705;Q9UN37;I3L4J1;A8K5D8;A8K4G7;A0A024R2C5;O75351 A0A024R705 A0A024R705 VPS4A;VPS4B Vacuolar protein sorting-associated protein 4A;Vacuolar protein sorting-associated protein 4B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 318.8474 3 316.176356 945.507237 NaN NaN NaN -0.68467 -0.00021648 NaN NaN NaN NaN 58.999 0.30749 58.999 58.859 59.166 0 0 0 0 0.047824 1 34288 31.422 26.74 1 NaN NaN 0 6263000 0 6263000 11461 213 4359 4476 17908 17908 FPIDYPYSPPAFR 13 0 1 Unmodified _FPIDYPYSPPAFR_ 0 0 0 U3KQP9;U3KQ77;U3KPV8;A0A024R1Z1;P49427 U3KQP9 U3KQP9 CDC34 Ubiquitin-conjugating enzyme E2 R1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.3966 2 785.390459 1568.76637 NaN NaN NaN 0.76185 0.00059835 NaN NaN NaN NaN 111.26 0.15495 111.26 111.18 111.34 0 0 0 0 0.0060647 2 69976 55.353 29.234 1 NaN NaN 0 5169300 0 5169300 11462 97 4360 4477 17909;17910 17909 FPLAGLEENYCR 12 0 1 Unmodified _FPLAGLEENYCR_ 0 0 0 CON__P06868;A0A0F7G8J1 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3489 2 734.848101 1467.68165 NaN NaN NaN 0.0020979 1.5416E-06 NaN NaN NaN NaN 91.224 0.91814 91.224 90.812 91.73 0 0 0 0 0.0020172 1 56415 71.451 56.784 1 NaN NaN 0 11661000 11661000 0 + 11463 1157 4361 4478 17911 17911 FPLAGLEENYCR 12 0 1 Unmodified _FPLAGLEENYCR_ 0 0 0 CON__P06868;A0A0F7G8J1 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 734.8486 2 734.848101 1467.68165 NaN NaN NaN -0.35013 -0.00025729 NaN NaN NaN NaN 105.26 0.97477 105.26 104.75 105.73 0 0 0 0 0.0015987 1 60094 76.228 60.337 1 NaN NaN 0 7227400 7227400 0 + 11464 1157 4361 4478 17912 17912 FPLAGLEENYCR 12 0 1 Unmodified _FPLAGLEENYCR_ 0 0 0 CON__P06868;A0A0F7G8J1 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.8487 2 734.848101 1467.68165 NaN NaN NaN -0.30369 -0.00022316 NaN NaN NaN NaN 105.02 0.84633 105.02 104.61 105.46 0 0 0 0 0.0029977 1 59044 66.595 39.497 1 NaN NaN 0 8090600 8090600 0 + 11465 1157 4361 4478 17913 17913 FPLPSIETK 9 1 0 Unmodified _FPLPSIETK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.2922 2 516.292225 1030.5699 86017.19 0.46939 0.00024234 -0.3121 -0.00016114 0.15728 8.1204E-05 516.292005648719 520.299177244003 89.683 0.95523 89.683 89.169 90.124 0 265 79 4 0 0 0 0.035134 1 55185 43.982 2.7547 1 1.0549 1.0851 0 32352000 16924000 15428000 11466 1412 4362 4479 17914 17914 FPLQEENSVTHHEVK 15 1 0 Unmodified _FPLQEENSVTHHEVK_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.9669 3 598.632081 1792.87441 78211.19 0.36214 0.00021679 0.75351 0.00045108 1.1156 0.00066786 598.966268693977 601.304071371137 46.372 0.58098 46.372 46.175 46.756 0 123 35 6 0 0 0 0.059303 1 22302 14.004 10.4 1 3.2905 2.6297 0 2909300 712690 2196700 11467 505 4363 4480 17915 17915 FPLTTESAMK 10 1 0 Oxidation (M) _FPLTTESAM(ox)K_ FPLTTESAM(1)K FPLTTESAM(154.28)K 0 1 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.7843 2 570.783907 1139.55326 74971.91 0.6891 0.00039333 -0.26832 -0.00015315 0.42078 0.00024018 570.784225563071 574.790868790734 48.216 1.3854 48.216 47.519 48.904 0 784 114 10 0 0 0 1.828E-16 3 26019 154.28 127.82 1 0.82279 1.0005 0 2476100000 1359000000 1117200000 11468 796 4364 4481 17916;17917;17918 17917 642 FPLTTESAMK 10 1 0 Oxidation (M) _FPLTTESAM(ox)K_ FPLTTESAM(1)K FPLTTESAM(148.14)K 0 1 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.7853 2 570.783907 1139.55326 76781.26 0.57689 0.00032928 -0.43185 -0.0002465 0.14504 8.2785E-05 570.784117045802 574.79076142156 47.088 1.534 47.088 46.471 48.005 0 725 119 10 0 0 0 9.9081E-13 3 25876 148.14 119.97 1 0.84655 1.003 0 3014400000 1645800000 1368600000 11469 796 4364 4481 17919;17920;17921 17919 642 FPLTTESAMK 10 1 0 Oxidation (M) _FPLTTESAM(ox)K_ FPLTTESAM(1)K FPLTTESAM(86.14)K 0 1 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.7913 2 570.783907 1139.55326 80306.8 0.47117 0.00026894 -0.055113 -3.1458E-05 0.41606 0.00023748 570.783967115781 574.791006665871 75.917 1.0633 75.917 75.47 76.534 0 272 71 9 0 0 0 0.00023412 2 40369 86.136 65.437 1 1.1471 0.91034 0 18930000 9009200 9921200 11470 796 4364 4481 17922;17923 17922 642 FPLTTESAMK 10 1 0 Oxidation (M) _FPLTTESAM(ox)K_ FPLTTESAM(1)K FPLTTESAM(49.72)K 0 1 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.7841 2 570.783907 1139.55326 NaN NaN NaN 0.31019 0.00017705 NaN NaN NaN NaN 54.99 2.5831 54.99 54.235 56.818 0 0 0 0 0.012071 2 27899 49.715 29.929 1 NaN NaN 0 106560000 106560000 0 11471 796 4364 4481 17924;17925 17925 642 FPLTTESAMK 10 1 0 Oxidation (M) _FPLTTESAM(ox)K_ FPLTTESAM(1)K FPLTTESAM(76.17)K 0 1 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.7914 2 570.783907 1139.55326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.754 1 54.754 54.254 55.254 0 0 0 0 0.0001477 1 27351 76.17 40.298 1 11472 796 4364 4481 17926 17926 642 FPLTTESAMK 10 1 0 Oxidation (M) _FPLTTESAM(ox)K_ FPLTTESAM(1)K FPLTTESAM(64.84)K 0 1 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.7912 2 570.783907 1139.55326 75610.62 0.37817 0.00021585 0.37371 0.00021331 0.75187 0.00042916 570.784600275408 574.791393593329 55.21 2.0529 55.21 54.627 56.68 3.8147E-06 647 135 10 0 0 0 0.001632 2 27025 64.841 47.455 1 0.52038 0.44591 0 128240000 78686000 49552000 11473 796 4364 4481 17927;17928 17928 642 FPLTTESAMK 10 1 0 Oxidation (M) _FPLTTESAM(ox)K_ FPLTTESAM(1)K FPLTTESAM(76.17)K 0 1 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.791 2 570.783907 1139.55326 78769.55 0.33493 0.00019117 0.00249 1.4212E-06 0.33742 0.00019259 570.783953951506 574.79100235389 76.199 1.1653 76.199 75.41 76.576 0 223 54 8 0 0 0 0.00053362 2 39716 76.17 58.784 1 1.0989 0.88318 0 16912000 8277300 8634600 11474 796 4364 4481 17929;17930 17929 642 FPLTTESAMK 10 1 0 Unmodified _FPLTTESAMK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.7871 2 562.78645 1123.55835 NaN NaN NaN 0.71855 0.00040439 NaN NaN NaN NaN 66.091 0.55054 66.091 65.943 66.494 0 0 0 0 0.0037411 1 38044 75.378 59.742 1 NaN NaN 0 52127000 52127000 0 11475 796 4364 4482 17931 17931 FPLTTESAMK 10 1 0 Unmodified _FPLTTESAMK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.7863 2 562.78645 1123.55835 81189.18 0.51728 0.00029112 1.0843 0.00061024 1.6016 0.00090136 562.786618618234 566.794721875899 64.811 1.0869 64.811 64.389 65.476 0 189 78 5 0 0 0 8.3436E-09 1 38234 124.23 107.69 1 0.83415 0.93645 0 115850000 56908000 58942000 11476 796 4364 4482 17932 17932 FPLTTESAMK 10 1 0 Unmodified _FPLTTESAMK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.7941 2 562.78645 1123.55835 80186.18 0.57228 0.00032207 0.33233 0.00018703 0.90461 0.0005091 562.786683083532 566.793774112838 75.869 1.8187 75.869 75.457 77.276 0 514 126 10 0 0 0 0.0030553 2 40367 66.27 50.831 1 1.1495 0.97763 0 62508000 30162000 32347000 11477 796 4364 4482 17933;17934 17934 FPLTTESAMK 10 1 0 Unmodified _FPLTTESAMK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.7866 2 562.78645 1123.55835 80163.98 0.41622 0.00023424 0.41092 0.00023126 0.82714 0.0004655 562.786643736133 566.79387118475 76.188 1.5749 76.188 75.752 77.327 0 412 102 10 0 0 0 0.00039656 2 39771 87.639 74.651 1 1.1586 0.98226 0 64629000 30598000 34031000 11478 796 4364 4482 17935;17936 17936 FPNLVDPWTPHLYAR 15 0 1 Unmodified _FPNLVDPWTPHLYAR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.3183 3 609.317656 1824.93114 NaN NaN NaN 0.76856 0.0004683 NaN NaN NaN NaN 113.38 1.1247 113.38 112.9 114.03 7.6294E-06 0 0 0 0.00037871 1 71746 66.246 56.05 1 NaN NaN 0 37171000 37171000 0 11479 908 4365 4483 17937 17937 FPNLVDPWTPHLYAR 15 0 1 Unmodified _FPNLVDPWTPHLYAR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.6534 3 609.317656 1824.93114 77676.55 0.72657 0.00044271 -0.18852 -0.00011487 0.53805 0.00032784 609.651833058182 612.653588016692 123.27 0.98331 123.27 122.99 123.97 7.6294E-06 265 42 11 0 0 0 0.00073219 1 73523 45.084 41.116 1 1.478 1.2647 0 39841000 16408000 23434000 11480 908 4365 4483 17938 17938 FPNLVDPWTPHLYAR 15 0 1 Unmodified _FPNLVDPWTPHLYAR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.6545 3 609.317656 1824.93114 77179.98 0.76519 0.00046624 -0.40393 -0.00024612 0.36126 0.00022012 609.651681866025 612.987776698367 123.03 0.84839 123.03 122.79 123.64 0 239 38 11 0 0 0 0.0003009 1 72456 49.066 49.066 1 1.4605 1.274 0 36922000 15675000 21247000 11481 908 4365 4483 17939 17939 FPPVVFYTPK 10 1 0 Unmodified _FPPVVFYTPK_ 0 0 0 Q6P2Q9;B4DK16;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.8388 2 597.831517 1193.64848 79530.88 0.83492 0.00049914 -0.040099 -2.3972E-05 0.79483 0.00047517 597.831416045446 601.83855512171 107.35 1.2941 107.35 106.89 108.18 7.6294E-06 407 98 6 0 0 0 0.00050835 3 67002 85.731 81.432 1 0.937 0.92116 0 23549000 11704000 11845000 11482 1854 4366 4484 17940;17941;17942 17941 FPPVVFYTPK 10 1 0 Unmodified _FPPVVFYTPK_ 0 0 0 Q6P2Q9;B4DK16;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.8326 2 597.831517 1193.64848 NaN NaN NaN 0.0076358 4.5649E-06 NaN NaN NaN NaN 106.67 1.2142 106.67 106.2 107.42 0 0 0 0 0.0068167 1 67800 66.621 48.636 1 NaN NaN 0 12899000 12899000 0 11483 1854 4366 4484 17943 17943 FPPVVFYTPK 10 1 0 Unmodified _FPPVVFYTPK_ 0 0 0 Q6P2Q9;B4DK16;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.8384 2 597.831517 1193.64848 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.69 1 106.69 106.19 107.19 0 0 0 0 5.6389E-05 1 67972 85.731 42.484 1 11484 1854 4366 4484 17944 17944 FPQLDSTSFANSR 13 0 1 Unmodified _FPQLDSTSFANSR_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.3579 2 735.354605 1468.69466 NaN NaN NaN -0.40278 -0.00029618 NaN NaN NaN NaN 82.85 0.52 82.85 82.626 83.146 0 0 0 0 4.4945E-06 1 49485 102.4 81.53 1 NaN NaN 0 19212000 0 19212000 11485 587 4367 4485 17945 17945 FPQLDSTSFANSR 13 0 1 Unmodified _FPQLDSTSFANSR_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3549 2 735.354605 1468.69466 72799.33 0.80262 0.00059021 -0.29781 -0.00021899 0.50481 0.00037122 735.354620152802 740.358576222151 81.912 0.50956 81.912 81.704 82.214 0 151 44 5 0 0 0 0.0037873 1 50221 64.121 52.631 1 1.9428 2.1232 0 30316000 9627700 20688000 11486 587 4367 4485 17946 17946 FPQLDSTSFANSR 13 0 1 Unmodified _FPQLDSTSFANSR_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.3595 2 735.354605 1468.69466 72101.33 0.71369 0.00052481 -0.38964 -0.00028652 0.32405 0.00023829 735.354197479996 740.358184409443 94.683 0.52834 94.683 94.434 94.962 0 119 31 5 0 0 0 0.0003366 1 52215 63.864 63.864 1 0.69557 0.59009 0 3083300 1514600 1568700 11487 587 4367 4485 17947 17947 FPSINHD 7 0 0 Unmodified _FPSINHD_ 0 0 0 P17812;B4E1E0 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.1959 2 415.195585 828.376617 NaN NaN NaN 1.1099 0.00046084 NaN NaN NaN NaN 43.043 0.40361 43.043 42.876 43.28 0 0 0 0 0.028512 1 22994 88.35 61.871 1 11488 1494 4368 4486 17948 17948 FPSINHD 7 0 0 Unmodified _FPSINHD_ 0 0 0 P17812;B4E1E0 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.1959 2 415.195585 828.376617 NaN NaN NaN 0.82485 0.00034247 NaN NaN NaN NaN 41.971 0.80334 41.971 41.697 42.5 0 0 0 0 0.039949 1 22537 63.287 46.36 1 11489 1494 4368 4486 17949 17949 FPSLLTHNENMVAK 14 1 0 Oxidation (M) _FPSLLTHNENM(ox)VAK_ FPSLLTHNENM(1)VAK FPSLLTHNENM(72.32)VAK 0 1 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.2799 3 539.608219 1615.80283 80727.8 0.41783 0.00022547 -0.22587 -0.00012188 0.19196 0.00010358 539.608155900305 542.279550736849 64.858 1.8118 64.858 63.979 65.791 0 922 160 8 0 0 0 4.5356E-05 3 36921 72.321 72.321 1 1.3889 1.5978 0 206290000 90737000 115560000 11490 1651 4369 4487 17950;17951;17952 17950 1430 FPSLLTHNENMVAK 14 1 0 Oxidation (M) _FPSLLTHNENM(ox)VAK_ FPSLLTHNENM(1)VAK FPSLLTHNENM(75.76)VAK 0 1 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.6144 3 539.608219 1615.80283 79361.05 0.44026 0.00023757 -0.21892 -0.00011813 0.22134 0.00011944 539.608198348343 542.279590875746 62.833 1.5802 62.833 62.194 63.774 -3.8147E-06 939 140 10 0 0 0 3.9502E-05 1 36596 75.764 75.764 1 1.3357 1.5613 0 286710000 122070000 164650000 11491 1651 4369 4487 17953 17953 1430 FPSLLTHNENMVAK 14 1 0 Oxidation (M) _FPSLLTHNENM(ox)VAK_ FPSLLTHNENM(1)VAK FPSLLTHNENM(42)VAK 0 1 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.414 2 808.90869 1615.80283 NaN NaN NaN 0.83002 0.00067141 NaN NaN NaN NaN 62.533 0.19247 62.533 62.47 62.663 0 0 0 0 0.0086359 1 36691 42.001 30.135 1 NaN NaN 0 7668000 7668000 0 11492 1651 4369 4487 17954 17954 1430 FPSLLTHNENMVAK 14 1 0 Oxidation (M) _FPSLLTHNENM(ox)VAK_ FPSLLTHNENM(1)VAK FPSLLTHNENM(48.28)VAK 0 1 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.2802 3 539.608219 1615.80283 78653.22 0.64709 0.00034917 -0.33707 -0.00018189 0.31002 0.00016729 539.608145595812 542.279642806539 73.839 1.1809 73.839 73.244 74.425 0 486 85 8 0 0 0 0.00070142 1 39058 48.277 48.277 1 0.65474 0.50812 0 14344000 8821800 5522700 11493 1651 4369 4487 17955 17955 1430 FPSTICTESFQFLDR 15 0 1 Unmodified _FPSTICTESFQFLDR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.941 2 924.435269 1846.85598 NaN NaN NaN -1.5718 -0.001453 NaN NaN NaN NaN 115.56 0.3714 115.56 115.36 115.73 0 0 0 0 0.0097533 1 73560 51.286 35.747 1 NaN NaN 0 3770500 0 3770500 11494 1699 4370 4488 17956 17956 FPSTICTESFQFLDR 15 0 1 Unmodified _FPSTICTESFQFLDR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.4398 2 924.435269 1846.85598 66985.13 0.709 0.00065543 -1.1077 -0.001024 -0.39872 -0.00036859 924.937194569381 929.438235358284 114.99 0.32869 114.99 114.82 115.15 -7.6294E-06 77 21 5 0 0 0 0.0036814 1 74948 41.383 32.428 1 1.5935 1.5892 0 7070700 3121900 3948800 11495 1699 4370 4488 17957 17957 FPTLTNINENNPTLLNPIK 19 1 0 Unmodified _FPTLTNINENNPTLLNPIK_ 0 0 0 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A0A0N7BBR4 A0A0N7BBR4 ND5;NADH5;nd5;ndh5;MT-ND5 NADH-ubiquinone oxidoreductase chain 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1081.0901 2 1077.08369 2152.15282 60045.85 0.66445 0.00071567 -0.42851 -0.00046154 0.23595 0.00025414 1077.58468819122 1081.09029645105 117.76 0.26459 117.76 117.63 117.89 7.6294E-06 74 18 6 0 0 0 1.1607E-05 1 77298 71.548 71.548 1 1.1821 1.2154 0 9527000 3835900 5691100 11497 0 4371 4489 17960 17960 FPTQISLAQLR 11 0 1 Unmodified _FPTQISLAQLR_ 0 0 0 A0A024R784;O15164;B4DYZ9;Q6ZSA6 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.3666 2 637.366787 1272.71902 76452.54 0.45328 0.0002889 -0.13608 -8.6736E-05 0.31719 0.00020217 637.366475853531 642.37162277164 102 0.75653 102 101.72 102.48 0 167 58 4 0 0 0 0.000286 3 64185 89.08 74.961 1 0.76232 0.81297 0 24581000 13054000 11527000 11498 217 4372 4490 17961;17962;17963 17961 FPTQISLAQLR 11 0 1 Unmodified _FPTQISLAQLR_ 0 0 0 A0A024R784;O15164;B4DYZ9;Q6ZSA6 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.3718 2 637.366787 1272.71902 79185.64 0.76993 0.00049073 0.32243 0.00020551 1.0924 0.00069624 637.367050690315 642.370890109008 114.97 0.47621 114.97 114.69 115.16 -7.6294E-06 72 20 5 0 0 0 0.035574 1 67210 36.684 24.836 1 1.3094 1.1335 0 2597900 1056100 1541800 11499 217 4372 4490 17964 17964 FPTQISLAQLR 11 0 1 Unmodified _FPTQISLAQLR_ 0 0 0 A0A024R784;O15164;B4DYZ9;Q6ZSA6 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.3716 2 637.366787 1272.71902 78318.12 0.7208 0.00045942 -0.18424 -0.00011743 0.53656 0.00034198 637.366744839193 642.370711622336 114.79 0.48438 114.79 114.48 114.96 7.6294E-06 72 21 6 0 0 0 0.01687 2 66179 45.598 39.517 1 1.3512 1.1503 0 3162900 1378500 1784500 11500 217 4372 4490 17965;17966 17966 FPVTDAVNK 9 1 0 Unmodified _FPVTDAVNK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.7681 2 495.766374 989.518196 86808.82 0.43094 0.00021364 0.068235 3.3828E-05 0.49917 0.00024747 495.76647357654 500.275091375115 46.714 0.41792 46.714 46.367 46.784 0 138 35 6 0 0 0 0.00097174 1 25196 91.783 58.942 1 2.2015 2.3641 0 39452000 24000000 15452000 11501 1754 4373 4491 17967 17967 FPVTDAVNK 9 1 0 Unmodified _FPVTDAVNK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.7663 2 495.766374 989.518196 NaN NaN NaN 0.088901 4.4074E-05 NaN NaN NaN NaN 46.831 0.28543 46.831 46.756 47.041 0 0 0 0 0.033076 1 25398 52.482 27.483 1 NaN NaN 0 19101000 19101000 0 11502 1754 4373 4491 17968 17968 FPVTDAVNK 9 1 0 Unmodified _FPVTDAVNK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.7666 2 495.766374 989.518196 86254.43 0.18335 9.09E-05 0.22421 0.00011115 0.40756 0.00020205 495.766466721427 499.773557143871 45.728 0.60142 45.728 45.442 46.044 0 275 53 7 0 0 0 0.0016784 2 25078 82.279 45.884 1 1.6193 1.823 0 70127000 25259000 44868000 11503 1754 4373 4491 17969;17970 17970 FQASQGENLEGK 12 1 0 Unmodified _FQASQGENLEGK_ 0 0 0 Q7Z3K3;B4DSK8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.3232 2 654.314948 1306.61534 77671.14 0.74955 0.00049044 0.19025 0.00012448 0.9398 0.00061492 654.31475670472 658.322433414449 34.435 0.50185 34.435 34.202 34.704 0 106 38 4 0 0 0 0.05825 1 15183 31.286 31.286 1 1.2407 1.0358 0 1801300 923280 878010 11504 1874 4374 4492 17971 17971 FQAVVALAVGR 11 0 1 Unmodified _FQAVVALAVGR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.8381 2 565.837665 1129.66078 79750 0.67421 0.00038149 -0.0017433 -9.8643E-07 0.67246 0.00038051 565.837537188266 570.84180835496 94.913 1.3016 94.913 94.261 95.563 0 345 109 5 0 0 0 0.00019215 2 57553 93.143 84.28 1 0.88587 1.0153 0 133570000 72506000 61068000 11505 908 4375 4493 17972;17973 17972 FQAVVALAVGR 11 0 1 Unmodified _FQAVVALAVGR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.8383 2 565.837665 1129.66078 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.698 1 95.698 95.198 96.198 7.6294E-06 0 0 0 0.0013312 1 58242 69.423 44.501 1 11506 908 4375 4493 17974 17974 FQAVVALAVGR 11 0 1 Unmodified _FQAVVALAVGR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8385 2 565.837665 1129.66078 80650.13 0.64863 0.00036702 -0.023042 -1.3038E-05 0.62559 0.00035398 565.837587745196 570.841721340009 93.733 1.6173 93.733 93.314 94.931 0 324 139 7 0 0 0 1.3191E-05 3 58272 107.57 86.627 1 0.92761 1.0686 0 73334000 38578000 34755000 11507 908 4375 4493 17975;17976;17977 17976 FQAVVALAVGR 11 0 1 Unmodified _FQAVVALAVGR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8368 2 565.837665 1129.66078 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.663 1 94.663 94.163 95.163 0 0 0 0 0.00083372 1 58864 70.256 52.87 1 11508 908 4375 4493 17978 17978 FQAVVALAVGR 11 0 1 Unmodified _FQAVVALAVGR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.8421 2 565.837665 1129.66078 79424.07 0.69757 0.00039471 0.69639 0.00039404 1.394 0.00078876 565.837464014588 570.841737615709 107.59 1.2948 107.59 107.26 108.56 -7.6294E-06 352 70 8 0 0 0 0.0056066 2 61539 55.908 47.06 1 1.3638 1.1529 0 30291000 12087000 18204000 11509 908 4375 4493 17979;17980 17979 FQDELESGK 9 1 0 Unmodified _FQDELESGK_ 0 0 0 O15042;E7ET15;H7C4V2 O15042 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7592 2 526.748379 1051.4822 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.392 1 32.392 31.892 32.892 0 0 0 0 0.011112 1 16055 62.582 46.035 1 11510 1374 4376 4494 17981 17981 FQDGAIR 7 0 1 Unmodified _FQDGAIR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 403.7114 2 403.711402 805.408252 93575.31 0.12586 5.081E-05 0.25062 0.00010118 0.37648 0.00015199 403.711562915831 408.715311675631 25.968 0.5719 25.968 25.543 26.115 0 78 29 5 0 0 0 0.0099852 2 11489 115.78 43.158 1 0.95417 1.0648 0 85199000 43466000 41733000 11511 2038 4377 4495 17982;17983 17983 FQDGVLEPDFPR 12 0 1 Unmodified _FQDGVLEPDFPR_ 0 0 0 CON__Q3ZBS7 CON__Q3ZBS7 CON__Q3ZBS7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3494 2 710.348791 1418.68303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.596 1 94.596 94.096 95.096 0 0 0 0 0.0005694 1 57449 78.653 62.646 1 + 11512 1173 4378 4496 17984 17984 FQDLGAAYEVLSDSEK 16 1 0 Unmodified _FQDLGAAYEVLSDSEK_ 0 0 0 Q9UBS4 Q9UBS4 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 890.4338 2 886.422881 1770.83121 NaN NaN NaN 0.67952 0.00060235 NaN NaN NaN NaN 106.06 0.34391 106.06 105.9 106.24 0 0 0 0 0.0001839 1 65774 72.496 63.542 1 NaN NaN 0 3733300 0 3733300 11513 2098 4379 4497 17985 17985 FQDLGAAYEVLSDSEK 16 1 0 Unmodified _FQDLGAAYEVLSDSEK_ 0 0 0 Q9UBS4 Q9UBS4 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 890.4297 2 886.422881 1770.83121 NaN NaN NaN 0.17969 0.00015928 NaN NaN NaN NaN 105.39 0.27104 105.39 105.31 105.58 7.6294E-06 0 0 0 0.00028511 1 66952 68.034 55.054 1 NaN NaN 0 3308900 0 3308900 11514 2098 4379 4497 17986 17986 FQDLGAAYEVLSDSEK 16 1 0 Unmodified _FQDLGAAYEVLSDSEK_ 0 0 0 Q9UBS4 Q9UBS4 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.4272 2 886.422881 1770.83121 NaN NaN NaN 3.2568 0.0028869 NaN NaN NaN NaN 105.33 0.22995 105.33 105.23 105.46 0 0 0 0 0.0056983 1 66956 53.001 38.843 1 NaN NaN 0 4251800 4251800 0 11515 2098 4379 4497 17987 17987 FQDLGAAYEVLSDSEK 16 1 0 Unmodified _FQDLGAAYEVLSDSEK_ 0 0 0 Q9UBS4 Q9UBS4 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 886.4232 2 886.422881 1770.83121 NaN NaN NaN -0.16018 -0.00014199 NaN NaN NaN NaN 117.48 0.38487 117.48 117.29 117.67 7.6294E-06 0 0 0 0.010855 1 69231 47.189 38.676 1 NaN NaN 0 772820 772820 0 11516 2098 4379 4497 17988 17988 FQDTAEALAAFTALMEGK 18 1 0 Oxidation (M) _FQDTAEALAAFTALM(ox)EGK_ FQDTAEALAAFTALM(1)EGK FQDTAEALAAFTALM(108.89)EGK 0 1 0 Q9Y2X3;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 969.9744 2 965.466766 1928.91898 62366.54 0.4589 0.00044305 -0.069852 -6.744E-05 0.38905 0.00037561 965.96844450635 969.975449739388 121.88 0.75884 121.88 121.58 122.34 7.6294E-06 389 50 11 0 0 0 2.414E-12 3 78683 108.89 108.89 1 1.6864 1.9035 0 79515000 31962000 47552000 11517 2129 4380 4498 17989;17990;17991 17989 1959 FQDTAEALAAFTALMEGK 18 1 0 Oxidation (M) _FQDTAEALAAFTALM(ox)EGK_ FQDTAEALAAFTALM(1)EGK FQDTAEALAAFTALM(156.17)EGK 0 1 0 Q9Y2X3;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 969.4736 2 965.466766 1928.91898 62530.98 0.77455 0.0007478 -0.3527 -0.00034052 0.42185 0.00040728 965.96813692804 969.473801837872 121.44 0.7645 121.44 121.1 121.87 -7.6294E-06 378 54 10 0 0 0 9.7416E-40 2 80279 156.17 156.17 1 1.6923 1.9005 0 75056000 29115000 45940000 11518 2129 4380 4498 17992;17993 17992 1959 FQDTAEALAAFTALMEGK 18 1 0 Oxidation (M) _FQDTAEALAAFTALM(ox)EGK_ FQDTAEALAAFTALM(1)EGK FQDTAEALAAFTALM(78.69)EGK 0 1 0 Q9Y2X3;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 965.4668 2 965.466766 1928.91898 61277.31 0.64734 0.00062499 0.36862 0.00035589 1.016 0.00098088 965.968800721538 969.473685169279 134.34 0.29727 134.34 134.2 134.5 0 87 13 10 0 0 0 5.6761E-06 2 81953 78.69 78.69 1 0.70819 0.57477 0 26744000 15778000 10967000 11519 2129 4380 4498 17994;17995 17994 1959 FQDTAEALAAFTALMEGK 18 1 0 Oxidation (M) _FQDTAEALAAFTALM(ox)EGK_ FQDTAEALAAFTALM(1)EGK FQDTAEALAAFTALM(71.34)EGK 0 1 0 Q9Y2X3;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 965.4669 2 965.466766 1928.91898 61453.65 0.56096 0.00054159 0.23282 0.00022478 0.79378 0.00076637 965.968460770058 969.975444738665 134.25 0.35226 134.25 134.04 134.39 0 117 18 9 0 0 0 1.0773E-05 2 80938 71.344 71.344 1 0.61354 0.49981 0 25623000 15773000 9849200 11520 2129 4380 4498 17996;17997 17996 1959 FQEAGELYNR 10 0 1 Unmodified _FQEAGELYNR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.7938 2 613.793652 1225.57275 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.244 1 45.244 44.744 45.744 3.8147E-06 0 0 0 2.9414E-06 1 24361 105.1 52.385 1 11521 1741 4381 4499 17998 17998 FQEAGELYNR 10 0 1 Unmodified _FQEAGELYNR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.7995 2 613.793652 1225.57275 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.358 1 45.358 44.858 45.858 0 0 0 0 3.8479E-38 1 24424 172.94 137.64 1 11522 1741 4381 4499 17999 17999 FQEAGELYNR 10 0 1 Unmodified _FQEAGELYNR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.7938 2 613.793652 1225.57275 77282.3 0.72786 0.00044676 0.1459 8.955E-05 0.87376 0.00053631 613.793582942385 618.797846981744 44.525 0.62876 44.525 44.238 44.867 0 307 50 8 0 0 0 2.6125E-09 2 24219 126.82 113.85 1 1.0582 1.2068 0 139760000 64260000 75503000 11523 1741 4381 4499 18000;18001 18000 FQEAGELYNR 10 0 1 Unmodified _FQEAGELYNR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.7974 2 613.793652 1225.57275 NaN NaN NaN -0.22787 -0.00013987 NaN NaN NaN NaN 52.751 0.93591 52.751 52.437 53.372 0 0 0 0 0.0044491 1 26064 72.607 59.229 1 NaN NaN 0 10268000 0 10268000 11524 1741 4381 4499 18002 18002 FQEAGELYNR 10 0 1 Unmodified _FQEAGELYNR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.7941 2 613.793652 1225.57275 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.634 1 52.634 52.134 53.134 0 0 0 0 0.002056 1 26058 68.016 39.798 1 11525 1741 4381 4499 18003 18003 FQEAGELYNR 10 0 1 Unmodified _FQEAGELYNR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.7972 2 613.793652 1225.57275 NaN NaN NaN -0.20933 -0.00012849 NaN NaN NaN NaN 53.242 0.9464 53.242 52.907 53.854 3.8147E-06 0 0 0 4.4715E-05 1 25737 101.65 73.472 1 NaN NaN 0 8850500 0 8850500 11526 1741 4381 4499 18004 18004 FQEAGELYNR 10 0 1 Unmodified _FQEAGELYNR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.7946 2 613.793652 1225.57275 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.176 1 53.176 52.676 53.676 0 0 0 0 0.00032006 1 25782 76.221 55.596 1 11527 1741 4381 4499 18005 18005 FQEEMDTVMK 10 1 0 2 Oxidation (M) _FQEEM(ox)DTVM(ox)K_ FQEEM(1)DTVM(1)K FQEEM(57.96)DTVM(57.96)K 0 2 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.2805 2 645.273046 1288.53154 76487.5 0.34509 0.00022268 -0.16896 -0.00010903 0.17613 0.00011365 645.27279800012 649.280052603931 23.339 0.36152 23.339 23.145 23.507 1.9073E-06 69 17 6 0 0 0 0.0084202 1 9167 57.96 53.019 1 2.3122 2.2832 0 8442000 2690000 5752000 11528 1721 4382 4500 18006 18006 1554;1555 FQEEMDTVMK 10 1 0 2 Oxidation (M) _FQEEM(ox)DTVM(ox)K_ FQEEM(1)DTVM(1)K FQEEM(118.5)DTVM(118.5)K 0 2 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.2806 2 645.273046 1288.53154 76580.5 0.49343 0.0003184 -0.24642 -0.00015901 0.24701 0.00015939 645.272945883373 649.280059085567 23.097 0.35488 23.097 22.937 23.291 0 62 14 7 0 0 0 4.3944E-08 1 8994 118.5 118.5 1 2.269 2.3592 0 9939900 3140300 6799600 11529 1721 4382 4500 18007 18007 1554;1555 FQELLASPAYR 11 0 1 Unmodified _FQELLASPAYR_ 0 0 0 Q9NSI2 Q9NSI2 Q9NSI2 FAM207A Protein FAM207A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.8478 2 647.843145 1293.67174 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.051 1 80.051 79.551 80.551 -7.6294E-06 0 0 0 0.00072269 1 48726 72.006 49.858 1 11530 2067 4383 4501 18008 18008 FQETSDEFEAAR 12 0 1 Unmodified _FQETSDEFEAAR_ 0 0 0 Q14683;G8JLG1;V9GY57 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.3151 2 715.315145 1428.61574 73606.64 0.72585 0.00051921 -0.15504 -0.00011091 0.5708 0.0004083 715.314590662548 720.820743007039 49.112 0.48123 49.112 48.834 49.316 0 150 37 6 0 0 0 0.00022287 2 26859 83.397 83.397 1 0.87436 0.90671 0 20611000 11888000 8722500 11531 1739 4384 4502 18009;18010 18010 FQETSDEFEAAR 12 0 1 Unmodified _FQETSDEFEAAR_ 0 0 0 Q14683;G8JLG1;V9GY57 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.3199 2 715.315145 1428.61574 74836.07 0.46477 0.00033245 0.60634 0.00043373 1.0711 0.00076618 715.817039564475 720.320058317822 47.644 0.23989 47.644 47.5 47.74 3.8147E-06 40 17 4 0 0 0 0.00018342 1 26541 75.387 71.185 1 0.81811 0.81801 0 11465000 5606500 5858200 11532 1739 4384 4502 18011 18011 FQETSDEFEAAR 12 0 1 Unmodified _FQETSDEFEAAR_ 0 0 0 Q14683;G8JLG1;V9GY57 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.8152 2 715.315145 1428.61574 NaN NaN NaN 0.01936 1.3849E-05 NaN NaN NaN NaN 47.793 0.40456 47.793 47.718 48.123 0 0 0 0 3.6901E-05 1 26751 97.456 86.933 1 NaN NaN 0 5154600 5154600 0 11533 1739 4384 4502 18012 18012 FQETSDEFEAAR 12 0 1 Unmodified _FQETSDEFEAAR_ 0 0 0 Q14683;G8JLG1;V9GY57 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.3195 2 715.315145 1428.61574 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.861 1 47.861 47.361 48.361 -3.8147E-06 0 0 0 0.00022717 1 26688 83.862 54.775 1 11534 1739 4384 4502 18013 18013 FQETSDEFEAAR 12 0 1 Unmodified _FQETSDEFEAAR_ 0 0 0 Q14683;G8JLG1;V9GY57 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.3198 2 715.315145 1428.61574 73601 0.73097 0.00052288 -0.31906 -0.00022823 0.41191 0.00029464 715.314501474737 720.319150888805 56.882 0.42216 56.882 56.64 57.062 0 123 28 6 0 0 0 0.020586 2 28724 39.266 39.266 1 1.1705 0.97845 0 3520800 1524300 1996500 11535 1739 4384 4502 18014;18015 18014 FQFLWGPR 8 0 1 Unmodified _FQFLWGPR_ 0 0 0 Q53G50;B2R8F3;O15479 Q53G50 Q53G50 MAGEB2 Melanoma-associated antigen B2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7841 2 525.779619 1049.54469 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.8 1 108.8 108.3 109.3 0 0 0 0 0.030389 1 68004 62.717 41.442 1 11536 861 4385 4503 18016 18016 FQFLYDVQVPIVDK 14 1 0 Unmodified _FQFLYDVQVPIVDK_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 856.4614 2 855.958706 1709.90286 68251.78 1.1478 0.00098247 -0.052445 -4.4891E-05 1.0954 0.00093758 856.460179533456 860.46699081581 125.25 0.36736 125.25 125.05 125.42 0 94 24 6 0 0 0 0.0045563 1 81391 45.257 45.257 1 1.2979 1.3075 0 5373300 2224600 3148700 11537 418 4386 4504 18017 18017 FQFLYDVQVPIVDK 14 1 0 Unmodified _FQFLYDVQVPIVDK_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.9593 2 855.958706 1709.90286 68325.48 1.2567 0.0010757 -0.79388 -0.00067953 0.46284 0.00039617 856.459634323462 859.965660083125 124.88 0.57858 124.88 124.5 125.08 0 119 40 5 0 0 0 0.0014549 1 83099 53.569 53.569 1 1.3399 1.3517 0 7877100 3123600 4753500 11538 418 4386 4504 18018 18018 FQFNLQDFR 9 0 1 Unmodified _FQFNLQDFR_ 0 0 0 Q16513 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8052 2 607.80128 1213.58801 80206.8 0.50044 0.00030417 0.37304 0.00022673 0.87347 0.0005309 607.801311025971 612.805326450399 108.11 0.40848 108.11 107.9 108.31 0 83 31 4 0 0 0 0.0056175 1 67363 66.27 66.27 1 2.2354 2.2919 0 6535900 3154400 3381400 11539 1769 4387 4505 18019 18019 FQGEDTVVIASK 12 1 0 Unmodified _FQGEDTVVIASK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;M1V490;M1VPF9;M1V481;M1VPF7;M1VRN0;M1VKI9;M1VE89;Q6P164;Q2TA90;Q66K46 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020630)_K15;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-RET(NM_020975)_K16;R12 Kinesin-like protein;Kinesin-1 heavy chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3456 2 647.337892 1292.66123 NaN NaN NaN 0.68345 0.00044242 NaN NaN NaN NaN 59.078 0.42708 59.078 58.804 59.231 0 0 0 0 5.5712E-05 1 33547 93.258 78.584 1 NaN NaN 0 7921400 0 7921400 11540 1186 4388 4506 18020 18020 FQGEYGSDPEERPPNLK 17 1 1 Unmodified _FQGEYGSDPEERPPNLK_ 0 0 1 A8K0P8;Q68CQ4;H7C2R4 A8K0P8 A8K0P8 DIEXF Digestive organ expansion factor homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.9864 3 654.977916 1961.91192 76044.34 0.96129 0.00062963 1.1794 0.00077249 2.1407 0.0014021 654.97792475294 660.985504332769 48.427 0.28233 48.427 48.247 48.529 0 42 18 5 0 0 0 9.3561E-05 1 27064 49.535 38.942 1 1.6002 1.7835 0 11090000 4221100 6868400 11541 699 4389 4507 18021 18021 FQGQPDIYK 9 1 0 Unmodified _FQGQPDIYK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.2767 2 548.277106 1094.53966 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.871 1 44.871 44.371 45.371 0 0 0 0 0.0033698 1 24561 71.501 42.125 1 11542 1990 4390 4508 18022 18022 FQGVSLPVHLR 11 0 1 Unmodified _FQGVSLPVHLR_ 0 0 0 C9JG87;Q9NYK5 C9JG87 C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 421.9142 3 418.24354 1251.70879 NaN NaN NaN 0.10665 4.4607E-05 NaN NaN NaN NaN 88.488 0.44824 88.488 88.356 88.804 0 0 0 0 0.044142 1 53442 32.329 19.753 1 NaN NaN 0 4881700 0 4881700 11543 1134 4391 4509 18023 18023 FQGVSLPVHLR 11 0 1 Unmodified _FQGVSLPVHLR_ 0 0 0 C9JG87;Q9NYK5 C9JG87 C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.5793 3 418.24354 1251.70879 115436.7 0.13713 5.7356E-05 -1.5457 -0.00064646 -1.4085 -0.00058911 418.575861564436 421.579540089574 87.154 0.4122 87.154 86.98 87.393 0 75 34 4 0 0 0 0.025442 1 53634 30.205 17.629 1 0.84358 0.84219 0 8998200 4407300 4590900 11544 1134 4391 4509 18024 18024 FQGVSLPVHLR 11 0 1 Unmodified _FQGVSLPVHLR_ 0 0 0 C9JG87;Q9NYK5 C9JG87 C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.9142 3 418.24354 1251.70879 NaN NaN NaN 0.43731 0.0001829 NaN NaN NaN NaN 86.928 0.082199 86.928 86.884 86.966 0 0 0 0 0.046103 1 53593 31.597 19.02 1 NaN NaN 0 2811300 0 2811300 11545 1134 4391 4509 18025 18025 FQHILR 6 0 1 Unmodified _FQHILR_ 0 0 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 407.2413 2 407.24013 812.465707 93640.66 0.40473 0.00016482 0.14064 5.7276E-05 0.54537 0.0002221 407.240065058322 412.244177802864 26.954 0.55344 26.954 26.767 27.32 0 134 27 8 0 0 0 0.035243 1 12245 116.09 64.103 1 1.1709 1.3575 0 305370000 160710000 144660000 11546 1639 4392 4510 18026 18026 FQIEANFPR 9 0 1 Unmodified _FQIEANFPR_ 0 0 0 Q96CS3 Q96CS3 Q96CS3 FAF2 FAS-associated factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.2957 2 561.290548 1120.56654 81113.55 0.73021 0.00040986 0.52675 0.00029566 1.257 0.00070552 561.290727710289 566.295073913291 86.302 0.68628 86.302 85.943 86.63 0 176 54 5 0 0 0 0.0001673 2 51919 107.66 91.462 1 1.2201 1.2609 0 37186000 15863000 21323000 11547 1961 4393 4511 18027;18028 18028 FQIEANFPR 9 0 1 Unmodified _FQIEANFPR_ 0 0 0 Q96CS3 Q96CS3 Q96CS3 FAF2 FAS-associated factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.295 2 561.290548 1120.56654 NaN NaN NaN -1.0308 -0.00057856 NaN NaN NaN NaN 85.243 0.68109 85.243 84.831 85.512 0 0 0 0 0.00014296 1 52451 96.253 64.318 1 NaN NaN 0 18501000 0 18501000 11548 1961 4393 4511 18029 18029 FQIGDYLDIAITPPNR 16 0 1 Unmodified _FQIGDYLDIAITPPNR_ 0 0 0 H7BZW6;X6RAL5;O00422 H7BZW6 H7BZW6 SAP18 Histone deacetylase complex subunit SAP18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 916.981 2 916.980701 1831.94685 64089.95 0.88695 0.00081332 -0.56742 -0.00052031 0.31953 0.000293 916.980482727163 921.984403684341 126.54 0.58123 126.54 126.3 126.88 -7.6294E-06 233 43 8 0 0 0 1.9865E-08 2 82330 101.39 101.39 1 1.2462 1.2868 0 23906000 12110000 11796000 11549 1314 4394 4512 18030;18031 18031 FQIGDYLDIAITPPNR 16 0 1 Unmodified _FQIGDYLDIAITPPNR_ 0 0 0 H7BZW6;X6RAL5;O00422 H7BZW6 H7BZW6 SAP18 Histone deacetylase complex subunit SAP18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.9849 2 916.980701 1831.94685 63309.23 0.83424 0.00076498 -0.50788 -0.00046572 0.32636 0.00029927 917.481811232586 921.984571018311 126.22 0.59904 126.22 125.95 126.55 0 227 37 9 0 0 0 6.6559E-26 2 84090 150.11 150.11 1 1.1789 1.2875 0 38213000 18554000 19659000 11550 1314 4394 4512 18032;18033 18032 FQIQDISVETEDNK 14 1 0 Unmodified _FQIQDISVETEDNK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1;A4QPE4;O15020 D6W5C0;O15020 D6W5C0 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.4091 2 833.401949 1664.78935 65255.9 0.93762 0.00078141 0.035215 2.9348E-05 0.97283 0.00081076 833.903484488429 837.408867796697 86.508 0.76447 86.508 86.153 86.917 0 284 56 7 0 0 0 0.0014549 2 51929 53.569 48.675 1 1.1094 1.1747 0 31267000 16331000 14936000 11551 415;1372 4395 4513 18034;18035 18034 FQIQDISVETEDNK 14 1 0 Unmodified _FQIQDISVETEDNK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1;A4QPE4;O15020 D6W5C0;O15020 D6W5C0 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.4099 2 833.401949 1664.78935 66623.88 0.94803 0.00079009 -0.38461 -0.00032054 0.56342 0.00046955 833.903405053223 837.408493754264 85.683 0.71089 85.683 85.292 86.002 0 290 53 9 0 0 0 2.0984E-06 2 52663 106.49 100.52 1 1.0431 1.0911 0 34433000 20422000 14010000 11552 415;1372 4395 4513 18036;18037 18037 FQIQDISVETEDNK 14 1 0 Unmodified _FQIQDISVETEDNK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1;A4QPE4;O15020 D6W5C0;O15020 D6W5C0 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.4094 2 833.401949 1664.78935 65849.32 0.56902 0.00047423 0.29663 0.00024721 0.86565 0.00072144 833.402299411846 837.409173967606 99.214 0.72632 99.214 98.891 99.617 0 211 40 9 0 0 0 0.00024508 2 55959 62.924 56.82 1 3.4184 2.7059 0 6248700 1132100 5116600 11553 415;1372 4395 4513 18038;18039 18038 FQIQDISVETEDNK 14 1 0 Unmodified _FQIQDISVETEDNK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1;A4QPE4;O15020 D6W5C0;O15020 D6W5C0 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 837.4093 2 833.401949 1664.78935 NaN NaN NaN -0.043116 -3.5933E-05 NaN NaN NaN NaN 99.085 0.55406 99.085 98.856 99.41 0 0 0 0 0.0061293 1 55084 54.7 39.434 1 NaN NaN 0 5852200 0 5852200 11554 415;1372 4395 4513 18040 18040 FQIYFDNCPLLTIPGR 16 0 1 Unmodified _FQIYFDNCPLLTIPGR_ 0 0 0 O43143 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.0007 2 977.498204 1952.98185 61189.39 0.42932 0.00041966 0.47867 0.0004679 0.90799 0.00088756 978.000231139392 983.00460750594 128.18 0.76996 128.18 127.94 128.71 0 273 51 9 0 0 0 1.4847E-08 2 83518 104.24 104.24 1 0.93173 0.94022 0 15546000 7258800 8287100 11555 1379 4396 4514 18041;18042 18042 FQIYFDNCPLLTIPGR 16 0 1 Unmodified _FQIYFDNCPLLTIPGR_ 0 0 0 O43143 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 978.001 2 977.498204 1952.98185 61226.11 0.61934 0.0006054 0.88737 0.0008674 1.5067 0.0014728 977.499188710505 983.005018810525 127.85 0.2409 127.85 127.65 127.89 0 112 15 8 0 0 0 0.00015601 2 85318 73.848 73.848 1 1.0443 1.2115 0 65039000 31915000 33124000 11556 1379 4396 4514 18043;18044 18044 FQIYFDNCPLLTIPGR 16 0 1 Unmodified _FQIYFDNCPLLTIPGR_ 0 0 0 O43143 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 982.9686 2 977.498204 1952.98185 61226.08 0.62587 0.00061179 0.47975 0.00046895 1.1056 0.0010807 978.000126617541 982.502856324866 128 0.49834 128 127.87 128.37 0 173 29 9 0 0 0 2.3968E-05 1 85493 70.438 70.438 1 0.90079 0.94321 0 22720000 11618000 11103000 11557 1379 4396 4514 18045 18045 FQLFQK 6 1 0 Unmodified _FQLFQK_ 0 0 0 P46939 P46939 P46939 UTRN Utrophin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 405.7292 2 405.729064 809.443575 95509.87 -0.10481 -4.2523E-05 0.32125 0.00013034 0.21644 8.7817E-05 405.729040382578 409.736089705558 60.557 0.54961 60.557 60.372 60.921 0 178 42 8 0 0 0 0.040796 1 35414 107.15 5.0252 1 1.0168 1.1363 0 95276000 47686000 47590000 11558 1574 4397 4515 18046 18046 FQLPVFLDSHFVYSFSPVAGPNK 23 1 0 Unmodified _FQLPVFLDSHFVYSFSPVAGPNK_ 0 0 0 Q99549 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.1203 3 866.112675 2595.3162 65680.27 0.7958 0.00068925 0.5741 0.00049723 1.3699 0.0011865 866.4469704319 869.118607468159 133.21 0.26488 133.21 133.11 133.37 0 42 7 12 0 0 0 4.7714E-06 2 89440 45.395 42.297 1 0.91929 1.014 0 43802000 24604000 19198000 11559 1994 4398 4516 18047;18048 18047 FQNMLEFQTPELLR 14 0 1 Oxidation (M) _FQNM(ox)LEFQTPELLR_ FQNM(1)LEFQTPELLR FQNM(40.59)LEFQTPELLR 0 1 0 Q6ZMY0;Q9H6S0 Q6ZMY0 Q6ZMY0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.4529 2 891.448179 1780.88181 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.53 1 111.53 111.03 112.03 0 0 0 0 0.022351 1 71995 40.589 30.902 1 11560 1863 4399 4517 18049 18049 1719 FQPGETLTEILETPATSEQEAEHQR 25 0 1 Unmodified _FQPGETLTEILETPATSEQEAEHQR_ 0 0 0 A4QPB0;A0A024RC65;P46940;H0YLE8;B4E2M0;B4DNP4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 951.4601 3 947.789425 2840.34645 63687.62 0.60729 0.00057558 -0.029656 -2.8108E-05 0.57763 0.00054748 948.12360764536 951.45983213088 111.33 0.40312 111.33 111.12 111.52 0 139 27 8 0 0 0 0.00063785 1 71769 29.591 29.591 1 1.744 1.7298 0 15871000 6589700 9281000 11561 352 4400 4518 18050 18050 FQPGETLTEILETPATSEQEAEHQR 25 0 1 Unmodified _FQPGETLTEILETPATSEQEAEHQR_ 0 0 0 A4QPB0;A0A024RC65;P46940;H0YLE8;B4E2M0;B4DNP4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 951.1252 3 947.789425 2840.34645 63098.13 0.8226 0.00077965 -0.06178 -5.8554E-05 0.76082 0.00072109 948.123477132672 951.460079437512 123.05 0.37765 123.05 122.83 123.21 7.6294E-06 106 18 8 0 0 0 0.0094842 1 73458 21.647 19.364 1 0.8808 0.75576 0 6263200 3412200 2851000 11562 352 4400 4518 18051 18051 FQPLFGDFAAEK 12 1 0 Unmodified _FQPLFGDFAAEK_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.3435 2 685.342978 1368.6714 74186.5 0.71742 0.00049168 0.79492 0.00054479 1.5123 0.0010365 685.343100857997 689.351091067337 107.68 1.1897 107.68 107.22 108.41 -7.6294E-06 482 89 9 0 0 0 0.0055887 2 66949 59.542 51.896 1 0.85486 0.96847 0 154920000 83064000 71857000 11563 1750 4401 4519 18052;18053 18052 FQPLFGDFAAEK 12 1 0 Unmodified _FQPLFGDFAAEK_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3505 2 685.342978 1368.6714 73752.65 0.68658 0.00047055 0.86372 0.00059194 1.5503 0.0010625 685.34312877637 689.351032262389 107.04 1.0049 107.04 106.65 107.66 0 434 71 9 0 0 0 0.0023961 2 68365 58.699 51.031 1 0.85081 0.98106 0 185200000 99558000 85644000 11564 1750 4401 4519 18054;18055 18055 FQPLFGDFAAEK 12 1 0 Unmodified _FQPLFGDFAAEK_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.8525 2 685.342978 1368.6714 72957 0.7721 0.00052916 0.28762 0.00019712 1.0597 0.00072628 685.343052811119 689.350210381084 118.84 1.0678 118.84 118.49 119.56 0 306 48 10 0 0 0 0.017556 2 70123 41.399 37.382 1 0.96089 0.79588 0 44570000 22990000 21579000 11565 1750 4401 4519 18056;18057 18056 FQPLFGDFAAEK 12 1 0 Unmodified _FQPLFGDFAAEK_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.3441 2 685.342978 1368.6714 73055.58 0.8081 0.00055382 0.068768 4.713E-05 0.87686 0.00060095 685.342907608203 689.350021812648 118.65 1.0307 118.65 118.29 119.32 -7.6294E-06 314 46 12 0 0 0 0.020361 2 69056 48.44 44.286 1 1.0057 0.84842 0 55206000 28611000 26594000 11566 1750 4401 4519 18058;18059 18059 FQPPQVPDQAPAEAPTEK 18 1 0 Unmodified _FQPPQVPDQAPAEAPTEK_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 975.9857 2 975.483805 1948.95306 62748.77 0.38378 0.00037437 0.85576 0.00083478 1.2395 0.0012092 975.484475132142 979.993020330209 76.153 0.5681 76.153 75.874 76.442 0 183 46 6 0 0 0 0.0016582 1 44843 36.445 36.445 1 1.0517 1.1198 0 16005000 7442100 8563100 11567 1380 4402 4520 18060 18060 FQPPQVPDQAPAEAPTEK 18 1 0 Unmodified _FQPPQVPDQAPAEAPTEK_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.4819 2 975.483805 1948.95306 63719.23 0.1814 0.00017695 0.37193 0.00036281 0.55333 0.00053976 975.483928943779 979.992966730195 75.368 0.61732 75.368 75.039 75.656 7.6294E-06 240 54 6 0 0 0 7.3677E-05 2 45312 50.843 50.843 1 1.0392 1.0814 0 19009000 8772600 10236000 11568 1380 4402 4520 18061;18062 18062 FQPPQVPDQAPAEAPTEK 18 1 0 Unmodified _FQPPQVPDQAPAEAPTEK_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 975.9858 2 975.483805 1948.95306 62508 -0.026352 -2.5706E-05 0.46213 0.0004508 0.43578 0.0004251 975.985254770541 979.49195839001 87.306 0.83987 87.306 86.864 87.704 0 263 47 9 0 0 0 0.015128 1 47954 24.964 12.988 1 0.89199 0.71327 0 7061800 3808700 3253100 11569 1380 4402 4520 18063 18063 FQPPQVPDQAPAEAPTEK 18 1 0 Unmodified _FQPPQVPDQAPAEAPTEK_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 979.4918 2 975.483805 1948.95306 62811.64 0.10623 0.00010363 0.30298 0.00029555 0.40921 0.00039918 975.483573089709 979.491722826864 87.351 0.80511 87.351 86.966 87.771 0 252 45 8 0 0 0 0.000628 1 47224 42.789 42.789 1 0.83557 0.68067 0 7455500 4168300 3287100 11570 1380 4402 4520 18064 18064 FQQAVDAVEEFLR 13 0 1 Unmodified _FQQAVDAVEEFLR_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.3985 2 776.39373 1550.77291 67430.85 1.1982 0.00093027 -0.86465 -0.00067131 0.33354 0.00025896 776.392533447809 781.397177202253 118.3 0.86958 118.3 117.94 118.81 -7.6294E-06 247 50 8 0 0 0 4.0017E-06 2 75870 129.89 124.35 1 1.0988 1.219 0 68101000 30450000 37652000 11571 1194;1193;1346 4403 4521 18065;18066 18066 FQQAVDAVEEFLR 13 0 1 Unmodified _FQQAVDAVEEFLR_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.3949 2 776.39373 1550.77291 68872.3 0.76487 0.00059384 0.30212 0.00023456 1.067 0.0008284 776.394081941062 781.398449086397 130.62 1.5691 130.62 130.18 131.75 0 257 73 8 0 0 0 0.050868 1 79340 29.063 29.063 1 1.9418 1.5835 0 14974000 5226600 9746900 11572 1194;1193;1346 4403 4521 18067 18067 FQQAVDAVEEFLR 13 0 1 Unmodified _FQQAVDAVEEFLR_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 781.3984 2 776.39373 1550.77291 68936.12 1.0373 0.00080536 -0.065044 -5.05E-05 0.97227 0.00075486 776.394140973977 781.397550236993 130.35 1.6611 130.35 130.09 131.75 0 222 70 8 0 0 0 0.00011733 2 78190 89.548 89.548 1 1.9648 1.6145 0 13887000 4988300 8898600 11573 1194;1193;1346 4403 4521 18068;18069 18069 FQQAVDAVEEFLRR 14 0 2 Unmodified _FQQAVDAVEEFLRR_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.637 3 569.965283 1706.87402 NaN NaN NaN -0.36229 -0.00020649 NaN NaN NaN NaN 110.98 0.65607 110.98 110.53 111.18 7.6294E-06 0 0 0 0.0019937 1 69593 53.754 27.213 1 NaN NaN 0 11649000 0 11649000 11574 1194;1193;1346 4404 4522 18070 18070 FQQAVDAVEEFLRR 14 0 2 Unmodified _FQQAVDAVEEFLRR_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.6376 3 569.965283 1706.87402 NaN NaN NaN -0.15205 -8.6664E-05 NaN NaN NaN NaN 109.91 0.60647 109.91 109.64 110.25 7.6294E-06 0 0 0 0.013044 1 70571 38.799 26.884 1 NaN NaN 0 7986800 0 7986800 11575 1194;1193;1346 4404 4522 18071 18071 FQQAVDAVEEFLRR 14 0 2 Unmodified _FQQAVDAVEEFLRR_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.9653 3 569.965283 1706.87402 76418.99 0.73376 0.00041822 0.12844 7.3204E-05 0.8622 0.00049142 570.299944504423 576.63757722038 121.54 0.59465 121.54 121.33 121.93 -7.6294E-06 101 30 5 0 0 0 0.007248 2 72348 32.275 27.727 1 1.9328 1.6847 0 4671500 1322500 3349100 11576 1194;1193;1346 4404 4522 18072;18073 18073 FQQAVDAVEEFLRR 14 0 2 Unmodified _FQQAVDAVEEFLRR_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.6379 3 569.965283 1706.87402 80108.37 0.67966 0.00038738 -0.038838 -2.2136E-05 0.64082 0.00036524 570.299790236676 576.637398526406 121.29 0.5369 121.29 121.13 121.67 0 88 29 6 0 0 0 0.0011629 2 71253 45.115 45.115 1 1.831 1.6582 0 5044000 1715600 3328500 11577 1194;1193;1346 4404 4522 18074;18075 18074 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAK 32 1 0 Unmodified _FQSAAIGALQEASEAYLVGLFEDTNLCAIHAK_ 0 0 0 K7EK07;B2R4P9;P84243;B2R6Y1;A8K4Y7 K7EK07 K7EK07 H3F3B;H3F3A Histone H3;Histone H3.3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1147.2401 3 1146.57305 3436.69731 56334.89 -0.12681 -0.00014539 -1.563 -0.0017921 -1.6898 -0.0019375 1147.23986469105 1149.91011644804 133.61 0.28065 133.61 133.5 133.78 0 37 5 13 0 0 0 1.3117E-07 2 87622 37.887 37.887 1 0.96655 1.1223 0 246910000 128410000 118510000 11578 827 4405 4523 18076;18077 18077 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAK 32 1 0 Unmodified _FQSAAIGALQEASEAYLVGLFEDTNLCAIHAK_ 0 0 0 K7EK07;B2R4P9;P84243;B2R6Y1;A8K4Y7 K7EK07 K7EK07 H3F3B;H3F3A Histone H3;Histone H3.3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1149.5786 3 1146.57305 3436.69731 55512.76 0.17377 0.00019924 -2.6183 -0.0030021 -2.4446 -0.0028029 1147.23905250091 1149.90925043212 133.6 0.25635 133.6 133.44 133.7 0 42 4 14 0 0 0 7.6758E-05 1 89835 34.031 34.031 1 0.96757 1.14 0 557420000 297460000 259960000 11579 827 4405 4523 18078 18078 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAK 32 1 0 Unmodified _FQSAAIGALQEASEAYLVGLFEDTNLCAIHAK_ 0 0 0 K7EK07;B2R4P9;P84243;B2R6Y1;A8K4Y7 K7EK07 K7EK07 H3F3B;H3F3A Histone H3;Histone H3.3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1147.2406 3 1146.57305 3436.69731 54518.4 -1.2914 -0.0014807 -0.051672 -5.9245E-05 -1.3431 -0.0015399 1147.24243863643 1149.91249753533 145.26 0.21408 145.26 145.23 145.45 0 54 8 15 0 0 0 3.0975E-31 1 92752 96.748 96.748 1 0.86129 1.003 0 245910000 125740000 120160000 11580 827 4405 4523 18079 18079 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAK 32 1 0 Unmodified _FQSAAIGALQEASEAYLVGLFEDTNLCAIHAK_ 0 0 0 K7EK07;B2R4P9;P84243;B2R6Y1;A8K4Y7 K7EK07 K7EK07 H3F3B;H3F3A Histone H3;Histone H3.3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1147.2394 3 1146.57305 3436.69731 54836.3 0.15869 0.00018195 -1.4164 -0.001624 -1.2577 -0.001442 1147.23985663104 1149.57837274363 134.97 0.45813 134.97 134.8 135.26 0 72 16 13 0 0 0 6.9406E-08 2 82678 43.376 43.376 1 0.87518 0.7757 0 330240000 177270000 152970000 11581 827 4405 4523 18080;18081 18080 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAK 32 1 0 Unmodified _FQSAAIGALQEASEAYLVGLFEDTNLCAIHAK_ 0 0 0 K7EK07;B2R4P9;P84243;B2R6Y1;A8K4Y7 K7EK07 K7EK07 H3F3B;H3F3A Histone H3;Histone H3.3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1150.6316 3 1146.57305 3436.69731 55335.93 0.47322 0.00054259 -1.9317 -0.0022148 -1.4585 -0.0016722 1147.23996493141 1149.91046628147 134.93 0.31181 134.93 134.76 135.07 0 38 7 10 0 0 0 1.037E-07 2 81701 40.328 40.328 1 0.94192 0.81843 0 312270000 165450000 146820000 11582 827 4405 4523 18082;18083 18082 FQSDSSSYPTVDSNSLLGQSR 21 0 1 Unmodified _FQSDSSSYPTVDSNSLLGQSR_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1143.031 2 1138.02729 2274.04003 61378.5 0.31953 0.00036363 -0.02899 -3.2991E-05 0.29054 0.00033064 1138.52831946114 1143.53274736913 86.517 0.39387 86.517 86.357 86.751 0 78 28 5 0 0 0 0.003925 1 52036 43.184 43.184 1 1.4224 1.4139 0 8458500 3520400 4938000 11583 619 4406 4524 18084 18084 FQSDSSSYPTVDSNSLLGQSR 21 0 1 Unmodified _FQSDSSSYPTVDSNSLLGQSR_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1143.0332 2 1138.02729 2274.04003 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.864 1 85.864 85.364 86.364 0 0 0 0 0.020574 1 52909 38.995 34.104 1 11584 619 4406 4524 18085 18085 FQSIVIGCALEDQK 14 1 0 Unmodified _FQSIVIGCALEDQK_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 808.4167 2 804.408523 1606.80249 68625.68 0.88333 0.00071056 0.167 0.00013434 1.0503 0.00084489 804.40868778077 808.415800914812 94.951 0.6805 94.951 94.722 95.403 0 247 54 6 0 0 0 0.00016295 3 57700 74.611 70.565 1 1.0896 1.0743 0 24739000 13401000 11338000 11585 900 4407 4525 18086;18087;18088 18087 FQSIVIGCALEDQK 14 1 0 Unmodified _FQSIVIGCALEDQK_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.4081 2 804.408523 1606.80249 NaN NaN NaN -0.31118 -0.00025031 NaN NaN NaN NaN 94.024 0.098595 94.024 93.95 94.048 0 0 0 0 0.014556 1 58399 48.998 32.774 1 NaN NaN 0 5096600 5096600 0 11586 900 4407 4525 18089 18089 FQSIVIGCALEDQK 14 1 0 Unmodified _FQSIVIGCALEDQK_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 808.4176 2 804.408523 1606.80249 68404.34 0.72906 0.00058646 0.89752 0.00072198 1.6266 0.0013084 804.911025006906 808.918098108906 108.3 0.54498 108.3 108.07 108.62 0 107 26 7 0 0 0 0.0066716 1 62144 41.684 41.684 1 1.0934 0.86158 0 5838700 2889000 2949700 11587 900 4407 4525 18090 18090 FQSIVIGCALEDQK 14 1 0 Unmodified _FQSIVIGCALEDQK_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 808.4183 2 804.408523 1606.80249 68133.71 0.57287 0.00046082 0.7956 0.00063999 1.3685 0.0011008 804.409202598407 808.416424506387 108.15 0.56607 108.15 107.98 108.54 0 115 27 6 0 0 0 0.00034727 1 61176 61.48 61.48 1 0.98409 0.80613 0 5403800 2439800 2964000 11588 900 4407 4525 18091 18091 FQSIVIGCALEDQKK 15 2 0 Unmodified _FQSIVIGCALEDQKK_ 0 0 1 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.6495 3 579.306428 1734.89746 80803.09 0.35006 0.00020279 -0.64372 -0.00037291 -0.29366 -0.00017012 579.640263726896 584.648904766746 90.616 0.41209 90.616 90.416 90.828 0 54 21 5 0 0 0 0.056537 1 49430 12.492 12.492 1 1.3286 1.162 0 1512200 575580 936570 11589 900 4408 4526 18092 18092 FQSLGVAFYR 10 0 1 Unmodified _FQSLGVAFYR_ 0 0 0 A0A158RFU6;P51149;C9J592;C9J8S3;B4DPH9;C9IZZ0 A0A158RFU6 A0A158RFU6 RAB7A Ras-related protein Rab-7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.3134 2 594.314023 1186.61349 80548.32 0.85022 0.0005053 -0.080224 -4.7678E-05 0.77 0.00045762 594.3136283752 599.318320494437 93.355 0.70044 93.355 93.079 93.779 0 204 59 5 0 0 0 0.011972 1 56576 60.59 60.59 1 1.3062 1.33 0 30055000 14705000 15350000 11590 628 4409 4527 18093 18093 FQSLGVAFYR 10 0 1 Unmodified _FQSLGVAFYR_ 0 0 0 A0A158RFU6;P51149;C9J592;C9J8S3;B4DPH9;C9IZZ0 A0A158RFU6 A0A158RFU6 RAB7A Ras-related protein Rab-7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.3151 2 594.314023 1186.61349 80623.89 0.64999 0.0003863 0.84895 0.00050455 1.4989 0.00089085 594.314454142984 599.318861982214 106.4 0.50108 106.4 106.11 106.61 0 107 31 5 0 0 0 0.046447 1 59959 46.129 46.129 1 0.84371 0.72509 0 2796300 1370800 1425600 11591 628 4409 4527 18094 18094 FQSSAVMALQEACEAYLVGLFEDTNLCAIHAK 32 1 0 Unmodified _FQSSAVMALQEACEAYLVGLFEDTNLCAIHAK_ 0 0 0 P68431 P68431 P68431 HIST1H3A Histone H3.1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1199.2448 3 1196.23868 3585.69421 52216.12 0.50298 0.00060168 0.66455 0.00079496 1.1675 0.0013966 1196.57373796313 1199.57933589392 134.92 0.29388 134.92 134.76 135.05 0 30 6 9 0 0 0 0.025478 1 81721 13.202 13.202 1 0.99364 0.83397 0 48600000 24439000 24160000 11592 1661 4410 4528 18095 18095 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAK 32 1 0 Oxidation (M) _FQSSAVM(ox)ALQEASEAYLVGLFEDTNLCAIHAK_ FQSSAVM(1)ALQEASEAYLVGLFEDTNLCAIHAK FQSSAVM(95.3)ALQEASEAYLVGLFEDTNLCAIHAK 0 1 0 Q71DI3 Q71DI3 Q71DI3 HIST2H3A Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1180.5769 3 1177.23745 3528.69051 54511.4 0.4622 0.00054412 -0.56781 -0.00066845 -0.10561 -0.00012433 1177.57088417055 1180.57653512158 145.27 0.20764 145.27 145.26 145.47 0 37 6 13 0 0 0 3.6633E-31 1 91331 95.302 95.302 1 1.3065 1.4902 0 175780000 75528000 100250000 11593 1865 4411 4529 18096 18096 1720 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAK 32 1 0 Unmodified _FQSSAVMALQEASEAYLVGLFEDTNLCAIHAK_ 0 0 0 Q71DI3 Q71DI3 Q71DI3 HIST2H3A Histone H3.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1175.2462 3 1171.90581 3512.69559 55427.22 0.20781 0.00024354 -0.49472 -0.00057976 -0.28691 -0.00033623 1172.57461653264 1175.24570300727 143.44 0.22192 143.44 143.37 143.59 0 85 19 11 0 0 0 0.042357 1 84946 9.5 7.917 1 1.2208 1.0414 0 1147300 466760 680550 11594 1865 4411 4530 18097 18097 FQSVIITSGTLSPLDIYPK 19 1 0 Unmodified _FQSVIITSGTLSPLDIYPK_ 0 0 0 A8MX75;P18074;E7EVE9;K7EKF3;Q2TB79;Q6ZNQ5 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1040.0735 2 1040.07226 2078.12996 61529.38 0.34674 0.00036063 0.14303 0.00014876 0.48976 0.00050939 1040.57357785568 1044.58099293371 125.08 0.34493 125.08 124.93 125.28 0 81 21 7 0 0 0 2.7866E-05 1 81261 57.434 57.434 1 0.75343 0.76282 0 5742400 3213500 2528900 11595 799 4412 4531 18098 18098 FQSVIITSGTLSPLDIYPK 19 1 0 Unmodified _FQSVIITSGTLSPLDIYPK_ 0 0 0 A8MX75;P18074;E7EVE9;K7EKF3;Q2TB79;Q6ZNQ5 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1044.0814 2 1040.07226 2078.12996 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.18 1 125.18 124.68 125.68 0 0 0 0 0.0062379 1 81359 46.481 32.802 1 11596 799 4412 4531 18099 18099 FQSVIITSGTLSPLDIYPK 19 1 0 Unmodified _FQSVIITSGTLSPLDIYPK_ 0 0 0 A8MX75;P18074;E7EVE9;K7EKF3;Q2TB79;Q6ZNQ5 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1044.5809 2 1040.07226 2078.12996 61229.29 0.86443 0.00089907 0.57215 0.00059507 1.4366 0.0014941 1040.57399578013 1044.58162822118 124.78 0.36108 124.78 124.58 124.94 0 108 24 7 0 0 0 9.0895E-05 2 83058 48.527 48.527 1 0.73423 0.7416 0 8381600 4774900 3606700 11597 799 4412 4531 18100;18101 18101 FQTEIQTVNK 10 1 0 Unmodified _FQTEIQTVNK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;H7BZ35 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.3274 2 604.319502 1206.62445 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.884 1 43.884 43.384 44.384 3.8147E-06 0 0 0 8.0351E-07 1 23912 107.15 61.138 1 11598 610 4413 4532 18102 18102 FQTIPLYYIEDHNGR 15 0 1 Unmodified _FQTIPLYYIEDHNGR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.9792 3 622.644209 1864.9108 77315.62 0.87599 0.00054543 -0.053562 -3.335E-05 0.82242 0.00051208 622.978354289831 626.314574023388 100.96 0.91805 100.96 100.63 101.55 0 329 68 6 0 0 0 0.0011223 1 62217 41.482 41.482 1 0.85032 0.918 0 48451000 28170000 20280000 11599 1742 4414 4533 18103 18103 FQTIPLYYIEDHNGR 15 0 1 Unmodified _FQTIPLYYIEDHNGR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.6447 3 622.644209 1864.9108 78024.94 0.61166 0.00038085 0.032157 2.0023E-05 0.64382 0.00040087 622.978555474229 625.980115734284 99.927 0.81099 99.927 99.476 100.29 0 389 63 8 0 0 0 6.9554E-05 1 62641 73.022 68.851 1 0.92804 1.0136 0 38149000 20556000 17593000 11600 1742 4414 4533 18104 18104 FQTLQTSK 8 1 0 Unmodified _FQTLQTSK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.7587 2 476.758549 951.502546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.972 1 27.972 27.472 28.472 0 0 0 0 0.0050084 1 13088 86.833 56.991 1 11601 2042 4415 4534 18105 18105 FQTLQTSK 8 1 0 Unmodified _FQTLQTSK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.7587 2 476.758549 951.502546 88832.59 -0.15974 -7.6159E-05 0.56378 0.00026879 0.40404 0.00019263 476.758657997595 480.765634737636 27.489 0.44944 27.489 27.239 27.688 0 96 23 6 0 0 0 4.1402E-09 1 12782 159.04 121.88 1 0.79285 0.8869 0 85353000 44905000 40448000 11602 2042 4415 4534 18106 18106 FQTLQTSK 8 1 0 Unmodified _FQTLQTSK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.766 2 476.758549 951.502546 NaN NaN NaN 0.16503 7.868E-05 NaN NaN NaN NaN 31.252 0.63032 31.252 30.942 31.572 0 0 0 0 0.0075527 1 13140 82.279 66.135 1 NaN NaN 0 5227600 0 5227600 11603 2042 4415 4534 18107 18107 FQTLQTSK 8 1 0 Unmodified _FQTLQTSK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.7657 2 476.758549 951.502546 87740.77 0.24895 0.00011869 -0.077236 -3.6823E-05 0.17172 8.1867E-05 476.758271800668 480.765577892557 31.265 0.66743 31.265 30.951 31.618 0 147 34 7 0 0 0 0.013689 2 12651 64.734 50.577 1 1.3428 1.1081 0 12000000 4878900 7121400 11604 2042 4415 4534 18108;18109 18108 FQTMEEK 7 1 0 Unmodified _FQTMEEK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.7176 2 456.710211 911.405868 91766.4 0.046866 2.1404E-05 0.39636 0.00018102 0.44323 0.00020243 456.710230440534 460.717371448032 25.84 0.3029 25.84 25.692 25.995 1.9073E-06 53 12 6 0 0 0 0.055806 1 9578 52.403 42.932 1 1.3164 1.0398 0 4113900 1857400 2256500 11605 1554;936 4416 4535 18110 18110 FQVATDALK 9 1 0 Unmodified _FQVATDALK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.781 2 496.7742 991.533846 90088.91 0.087929 4.3681E-05 0.083603 4.1532E-05 0.17153 8.5213E-05 496.774160185294 500.781002924404 62.611 0.70465 62.611 62.377 63.082 0 216 67 5 0 0 0 0.0042207 2 35877 69.812 45.18 1 1.0456 1.0285 0 23765000 12619000 11146000 11606 186;1747 4417 4536 18111;18112 18111 FQVATDALK 9 1 0 Unmodified _FQVATDALK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.7815 2 496.7742 991.533846 89480.86 0.23932 0.00011889 -0.0077883 -3.869E-06 0.23153 0.00011502 496.774153424717 500.781119618744 61.323 0.6162 61.323 61.138 61.754 0 201 57 5 0 0 0 0.02542 1 35858 47.869 29.093 1 0.89862 0.97821 0 39710000 21137000 18572000 11607 186;1747 4417 4536 18113 18113 FQVATDALK 9 1 0 Unmodified _FQVATDALK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.7813 2 496.7742 991.533846 NaN NaN NaN -0.11485 -5.7052E-05 NaN NaN NaN NaN 71.869 0.80511 71.869 71.636 72.441 0 0 0 0 0.0518 1 37897 46.447 36.033 1 NaN NaN 0 3487400 0 3487400 11608 186;1747 4417 4536 18114 18114 FQVATDALK 9 1 0 Unmodified _FQVATDALK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.7818 2 496.7742 991.533846 NaN NaN NaN 0.33183 0.00016484 NaN NaN NaN NaN 72.336 0.938 72.336 72.086 73.024 -7.6294E-06 0 0 0 0.047388 1 37338 47.869 35.513 1 NaN NaN 0 2925900 0 2925900 11609 186;1747 4417 4536 18115 18115 FQVATDALK 9 1 0 Unmodified _FQVATDALK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 496.7738 2 496.7742 991.533846 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.471 1 72.471 71.971 72.971 0 0 0 0 0.040246 1 37472 49.715 29.16 1 11610 186;1747 4417 4536 18116 18116 FQWDLNAWTK 10 1 0 Unmodified _FQWDLNAWTK_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.8297 2 654.822212 1307.62987 77625.11 1.1468 0.00075093 -0.18866 -0.00012354 0.95811 0.00062739 654.821802946392 658.829135033895 111.7 0.86603 111.7 111.37 112.24 0 226 61 6 0 0 0 0.010196 2 70306 53.683 49.07 1 1.1193 1.137 0 13690000 4801400 8888700 11611 862 4418 4537 18117;18118 18117 FQWDLNAWTK 10 1 0 Unmodified _FQWDLNAWTK_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.8299 2 654.822212 1307.62987 79126.7 0.74144 0.00048551 0.049591 3.2473E-05 0.79104 0.00051799 655.323356283611 658.829309465554 111.1 0.70376 111.1 110.81 111.52 0 196 50 5 0 0 0 0.010146 1 71543 53.751 48.269 1 1.3867 1.4123 0 12320000 5374000 6946300 11612 862 4418 4537 18119 18119 FQYCVAVGAQTFPSVSAPSK 20 1 0 Unmodified _FQYCVAVGAQTFPSVSAPSK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1077.037 2 1072.52769 2143.04083 59635.96 0.32693 0.00035064 0.19138 0.00020527 0.51831 0.0005559 1073.02903564614 1077.03609068193 104.49 0.32556 104.49 104.33 104.65 0 78 27 4 0 0 0 0.001325 2 64520 35.037 35.037 1 1.3759 1.3876 0 7086600 2631700 4454900 11613 5 4419 4538 18120;18121 18120 FQYCVAVGAQTFPSVSAPSK 20 1 0 Unmodified _FQYCVAVGAQTFPSVSAPSK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1077.038 2 1072.52769 2143.04083 58983.01 0.16928 0.00018156 0.94706 0.0010158 1.1163 0.0011973 1072.52838226072 1076.53615378333 103.84 0.26772 103.84 103.71 103.98 0 78 23 5 0 0 0 5.3206E-06 3 65741 56.482 56.482 1 1.4137 1.4534 0 11669000 5251600 6417100 11614 5 4419 4538 18122;18123;18124 18122 FQYCVAVGAQTFPSVSAPSK 20 1 0 Unmodified _FQYCVAVGAQTFPSVSAPSK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1077.042 2 1072.52769 2143.04083 57496.99 0.52401 0.00056201 1.6152 0.0017324 2.1392 0.0022944 1072.52815394372 1077.03809153316 115.89 0.29504 115.89 115.73 116.02 0 46 11 6 0 0 0 0.0063197 1 68010 26.591 24.952 1 1.0873 0.84467 0 3597800 1774200 1823600 11615 5 4419 4538 18125 18125 FQYCVAVGAQTFPSVSAPSK 20 1 0 Unmodified _FQYCVAVGAQTFPSVSAPSK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1077.0359 2 1072.52769 2143.04083 58217.18 0.28233 0.00030281 0.57743 0.00061931 0.85976 0.00092212 1073.02963053699 1076.53534857075 115.75 0.36655 115.75 115.6 115.96 0 60 17 6 0 0 0 0.0064967 1 67017 26.292 26.292 1 1.1603 0.9382 0 2974400 1359900 1614500 11616 5 4419 4538 18126 18126 FRCEDGETFSK 11 1 1 Unmodified _FRCEDGETFSK_ 0 0 1 B4DI61;Q6FI18;O00622;Q53FA4 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.3124 2 688.300984 1374.58741 72699.74 0.44727 0.00030786 -0.17344 -0.00011938 0.27383 0.00018848 688.301906237007 697.311883909361 24.515 0.19059 24.515 24.403 24.594 1.9073E-06 24 9 4 0 0 0 0.02457 1 10250 67.726 57.202 1 3.5149 3.8975 0 9553000 2053800 7499200 11617 979 4420 4539 18127 18127 FREDHPDLIQNAK 13 1 1 Unmodified _FREDHPDLIQNAK_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;O00164;Q05BZ1 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.5826 3 528.270595 1581.78995 83496.28 0.67107 0.00035451 0.15904 8.4015E-05 0.83011 0.00043852 528.270643486018 534.278221286815 36.117 0.37395 36.117 35.929 36.303 0 188 35 8 0 0 0 0.0011149 1 18168 46.66 46.66 1 0.62546 0.73033 0 31461000 19771000 11690000 11618 1244 4421 4540 18128 18128 FREDHPDLIQNAK 13 1 1 Unmodified _FREDHPDLIQNAK_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;O00164;Q05BZ1 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.6128 3 528.270595 1581.78995 83431.41 0.080287 4.2414E-05 -0.42438 -0.00022419 -0.34409 -0.00018177 528.270264094803 534.277753670634 33.391 0.42287 33.391 33.208 33.63 0 188 35 7 0 0 0 0.0012682 2 16732 52.5 42.379 1 0.57988 0.66944 0 30304000 19561000 10743000 11619 1244 4421 4540 18129;18130 18129 FRENLIYTYIGPVLVSVNPYR 21 0 2 Unmodified _FRENLIYTYIGPVLVSVNPYR_ 0 0 1 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.4861 3 838.456553 2512.34783 66106.44 0.82556 0.0006922 0.70447 0.00059066 1.53 0.0012829 838.790806596731 845.464796936151 132.96 0.1324 132.96 132.91 133.04 0 26 5 8 0 0 0 0.0027383 1 86951 34.65 27.435 1 1.1574 1.3014 0 5696700 2479500 3217300 11620 1088 4422 4541 18131 18131 FRENLIYTYIGPVLVSVNPYR 21 0 2 Unmodified _FRENLIYTYIGPVLVSVNPYR_ 0 0 1 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.464 3 838.456553 2512.34783 67350.7 1.0326 0.00086579 0.47021 0.00039425 1.5028 0.00126 838.791381480802 845.462583416712 132.92 0.2012 132.92 132.82 133.03 0 53 10 9 0 0 0 4.1564E-07 2 89141 54.834 50.309 1 1.1358 1.1452 0 10219000 4436500 5782100 11621 1088 4422 4541 18132;18133 18133 FRPAGAAPR 9 0 2 Unmodified _FRPAGAAPR_ 0 0 1 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 321.52 3 314.847121 941.519533 110632.8 0.15643 4.9252E-05 0.078964 2.4862E-05 0.2354 7.4114E-05 314.847021683242 321.519426206204 19.03 0.16333 19.03 18.926 19.089 0 28 11 4 0 0 0 0.021621 1 5517 39.305 27.936 1 0.92454 0.9037 0 2239700 1237100 1002600 11622 319 4423 4542 18134 18134 FRPAGAAPRPPPK 13 1 2 Unmodified _FRPAGAAPRPPPK_ 0 0 2 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.5981 3 454.598206 1360.77279 87747.06 0.3362 0.00015284 -0.20506 -9.3219E-05 0.13115 5.9619E-05 454.598090110168 463.941708727876 22.328 1.086 22.328 21.893 22.979 1.9073E-06 353 64 9 0 0 0 8.5487E-06 2 8333 101.56 95.119 1 0.47168 0.53793 0 227010000 158110000 68895000 11623 319 4424 4543 18135;18136 18135 FRPAGAAPRPPPK 13 1 2 Unmodified _FRPAGAAPRPPPK_ 0 0 2 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.5979 3 454.598206 1360.77279 88173.57 0.089238 4.0567E-05 -0.14722 -6.6928E-05 -0.057986 -2.636E-05 454.598137530983 463.941709185971 21.187 1.1936 21.187 20.721 21.915 1.9073E-06 291 55 9 0 0 0 0.00013528 2 7167 73.435 71.176 1 0.46769 0.5353 0 166680000 111290000 55384000 11624 319 4424 4543 18137;18138 18137 FRPAGAAPRPPPK 13 1 2 Unmodified _FRPAGAAPRPPPK_ 0 0 2 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 454.5982 3 454.598206 1360.77279 87077.92 0.15912 7.2334E-05 -0.34145 -0.00015522 -0.18233 -8.2887E-05 454.598090832474 463.941597465755 23.679 1.6737 23.679 23.228 24.902 0 433 91 9 0 0 0 0.002057 2 8002 55.04 51.817 1 1.522 1.4106 0 40600000 15609000 24991000 11625 319 4424 4543 18139;18140 18139 FRPAGAAPRPPPKPM 15 1 2 Oxidation (M) _FRPAGAAPRPPPKPM(ox)_ FRPAGAAPRPPPKPM(1) FRPAGAAPRPPPKPM(83.53) 0 1 3 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.9604 3 535.960927 1604.86095 79177.86 0.51995 0.00027867 -0.54082 -0.00028986 -0.020868 -1.1184E-05 535.960773862525 545.304266708435 26.689 1.8293 26.689 26.16 27.99 1.9073E-06 713 112 10 0 0 0 8.9086E-05 3 12382 83.53 83.53 1 0.75974 0.88081 0 611260000 347670000 263590000 11626 319 4425 4544 18141;18142;18143 18143 243 FRPAGAAPRPPPKPM 15 1 2 Oxidation (M) _FRPAGAAPRPPPKPM(ox)_ FRPAGAAPRPPPKPM(1) FRPAGAAPRPPPKPM(115.37) 0 1 3 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.9606 3 535.960927 1604.86095 79112.9 0.65189 0.00034939 -0.060753 -3.2561E-05 0.59114 0.00031683 535.961007406193 545.304659463453 25.814 1.6505 25.814 24.938 26.588 0 531 86 11 0 0 0 4.1368E-10 1 10974 115.37 115.37 1 0.77342 0.89563 0 785610000 453090000 332520000 11627 319 4425 4544 18144 18144 243 FRPAGAAPRPPPKPM 15 1 2 Unmodified _FRPAGAAPRPPPKPM_ 0 0 3 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.973 3 530.629289 1588.86604 80587.09 0.19731 0.0001047 -0.12861 -6.8245E-05 0.068694 3.6451E-05 530.629232055947 539.972865693966 41.982 1.2707 41.982 41.501 42.772 0 495 92 8 0 0 0 0.0083574 1 18929 26.471 26.471 1 1.5911 1.5813 0 10732000 4060200 6672100 11628 319 4425 4545 18145 18145 FRPLQLETINVTMAGK 16 1 1 Oxidation (M) _FRPLQLETINVTM(ox)AGK_ FRPLQLETINVTM(1)AGK FRPLQLETINVTM(45.44)AGK 0 1 1 A0A024RAV2;P46063;F5H2L2;F8WA66;F8WD97 A0A024RAV2 A0A024RAV2 RECQL ATP-dependent DNA helicase Q1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.0096 3 612.001228 1832.98185 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.241 1 91.241 90.741 91.741 0 0 0 0 0.0018142 1 55204 45.438 33.055 1 11629 314 4426 4546 18146 18146 232 FRPLQLETINVTMAGK 16 1 1 Oxidation (M) _FRPLQLETINVTM(ox)AGK_ FRPLQLETINVTM(1)AGK FRPLQLETINVTM(44.73)AGK 0 1 1 A0A024RAV2;P46063;F5H2L2;F8WA66;F8WD97 A0A024RAV2 A0A024RAV2 RECQL ATP-dependent DNA helicase Q1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.0101 3 612.001228 1832.98185 79598.05 0.42152 0.00025797 0.65957 0.00040366 1.0811 0.00066163 612.001942478268 618.009302677107 89.829 0.32835 89.829 89.595 89.923 0 80 27 6 0 0 0 0.00038719 1 55494 44.734 40.266 1 1.854 2.086 0 13457000 4735700 8720800 11630 314 4426 4546 18147 18147 232 FRPMDNLSGGEK 12 1 1 Oxidation (M) _FRPM(ox)DNLSGGEK_ FRPM(1)DNLSGGEK FRPM(70.49)DNLSGGEK 0 1 1 Q14683;G8JLG1;V9GY57 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.8363 2 683.824626 1365.6347 72781.45 0.2376 0.00016248 0.073831 5.0487E-05 0.31143 0.00021296 683.824925300711 692.835530984508 24.782 0.22248 24.782 24.644 24.867 0 29 10 4 0 0 0 0.0004 1 10464 70.488 70.488 1 1.0353 1.1202 0 10377000 5055000 5322100 11631 1739 4427 4547 18148 18148 1570 FRPMDNLSGGEK 12 1 1 Oxidation (M) _FRPM(ox)DNLSGGEK_ FRPM(1)DNLSGGEK FRPM(52.28)DNLSGGEK 0 1 1 Q14683;G8JLG1;V9GY57 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.8364 2 683.824626 1365.6347 74840.12 0.42746 0.00029231 -0.12572 -8.5969E-05 0.30174 0.00020634 683.824516016826 692.835973198631 24.396 0.25504 24.396 24.278 24.533 0 32 11 4 0 0 0 0.004169 1 10161 52.278 52.278 1 1.387 1.5592 0 13232000 5088600 8143800 11632 1739 4427 4547 18149 18149 1570 FRQDWGPITSISFR 14 0 2 Unmodified _FRQDWGPITSISFR_ 0 0 1 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.6304 3 570.630123 1708.86854 NaN NaN NaN 0.11403 6.5067E-05 NaN NaN NaN NaN 102.97 0.76765 102.97 102.63 103.4 0 0 0 0 0.0046418 1 65248 54.501 42.585 1 NaN NaN 0 8109500 8109500 0 11633 486 4428 4548 18150 18150 FRQDWGPITSISFR 14 0 2 Unmodified _FRQDWGPITSISFR_ 0 0 1 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.3026 3 570.630123 1708.86854 79323.71 0.82856 0.0004728 0.088444 5.0469E-05 0.917 0.00052327 570.964577878637 577.30241951864 114.47 0.65811 114.47 114.21 114.86 -7.6294E-06 157 28 9 0 0 0 0.0027354 2 66823 42.947 42.314 1 1.1327 0.96051 0 8587000 3933600 4653500 11634 486 4428 4548 18151;18152 18151 FRQDWGPITSISFR 14 0 2 Unmodified _FRQDWGPITSISFR_ 0 0 1 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.6304 3 570.630123 1708.86854 79799.15 0.59159 0.00033758 0.052467 2.9939E-05 0.64406 0.00036752 570.964498690113 577.302312092311 114.26 0.85378 114.26 113.95 114.81 0 159 35 8 0 0 0 0.00027721 2 65753 59.673 59.673 1 1.2768 1.1661 0 8698700 4361000 4337700 11635 486 4428 4548 18153;18154 18153 FSAFLDK 7 1 0 Unmodified _FSAFLDK_ 0 0 0 A0A096LP10;A0A087WT15 A0A096LP10 A0A096LP10 ALG13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.2265 2 414.218529 826.422505 92990.26 0.57014 0.00023616 -0.18786 -7.7817E-05 0.38227 0.00015834 414.218359832277 418.225382307666 58.654 1.0562 58.654 58.3 59.356 3.8147E-06 544 95 8 0 0 0 0.02687 1 33981 81.297 2.1806 1 0.67319 0.79244 0 428530000 255890000 172640000 11636 460 4429 4549 18155 18155 FSAIASQLVHAPPMQLGFPSLHSFIK 26 1 0 Unmodified _FSAIASQLVHAPPMQLGFPSLHSFIK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.8856 4 706.630821 2822.49418 72410.42 1.3612 0.0009619 0.21557 0.00015233 1.5768 0.0011142 706.881853569206 708.885236315183 134.33 0.161 134.33 134.25 134.41 0 52 7 11 0 0 0 8.0866E-12 1 81982 64.256 64.256 1 1.5032 1.1976 0 19729000 7169900 12559000 11637 1421 4430 4550 18156 18156 FSAIASQLVHAPPMQLGFPSLHSFIK 26 1 0 Unmodified _FSAIASQLVHAPPMQLGFPSLHSFIK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.1365 4 706.630821 2822.49418 72284.39 0.9655 0.00068225 0.90012 0.00063605 1.8656 0.0013183 707.132453500106 708.886654903928 134.27 0.27039 134.27 134.17 134.44 0 77 12 12 0 0 0 8.3367E-06 1 81018 44.167 44.167 1 1.5217 1.2202 0 19113000 7351800 11761000 11638 1421 4430 4550 18157 18157 FSALQQAVPTESTDNRR 17 0 2 Unmodified _FSALQQAVPTESTDNRR_ 0 0 1 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;Q96I65;H7C044 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.3295 3 640.657177 1918.9497 77325.59 0.69767 0.00044697 -0.02079 -1.3319E-05 0.67688 0.00043365 640.657434893521 647.663555550464 53.877 0.41498 53.877 53.648 54.063 3.8147E-06 140 39 5 0 0 0 1.1764E-05 1 30725 78.326 78.326 1 1.5556 1.7294 0 24308000 9607300 14701000 11639 896 4431 4551 18158 18158 FSALQQAVPTESTDNRR 17 0 2 Unmodified _FSALQQAVPTESTDNRR_ 0 0 1 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;Q96I65;H7C044 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.8172 3 640.657177 1918.9497 76881.73 0.4338 0.00027792 -0.19325 -0.0001238 0.24055 0.00015411 640.657270236553 647.328589379144 64.178 0.45063 64.178 63.957 64.407 0 144 36 6 0 0 0 0.0085053 1 33047 32.341 32.341 1 1.9556 1.7727 0 2991500 1112100 1879400 11640 896 4431 4551 18159 18159 FSASGELGNGNIK 13 1 0 Unmodified _FSASGELGNGNIK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3361 2 647.325316 1292.63608 76006.22 0.86379 0.00055916 0.17759 0.00011496 1.0414 0.00067411 647.32449204046 651.835498439163 51.641 0.59639 51.641 51.374 51.97 -3.8147E-06 198 51 5 0 0 0 0.0052306 2 28493 47.559 47.559 1 0.80085 0.86572 0 36480000 18457000 18023000 11641 1473 4432 4552 18160;18161 18161 FSASGELGNGNIK 13 1 0 Unmodified _FSASGELGNGNIK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.3264 2 647.325316 1292.63608 75594.33 0.78502 0.00050817 -0.25715 -0.00016646 0.52787 0.0003417 647.324964507059 651.332309877752 50.395 0.32365 50.395 50.21 50.534 3.8147E-06 114 30 5 0 0 0 1.7638E-13 2 28428 130.41 130.41 1 0.68724 0.77462 0 124600000 77913000 46690000 11642 1473 4432 4552 18162;18163 18163 FSCIIGPNGSGK 12 1 0 Unmodified _FSCIIGPNGSGK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.813 2 618.805705 1235.59686 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.704 1 54.704 54.204 55.204 0 0 0 0 0.00075751 1 30770 76.302 63.265 1 11643 2070;1136 4433 4553 18164 18164 FSCNQPQCPAVFYTFNK 17 1 0 Unmodified _FSCNQPQCPAVFYTFNK_ 0 0 0 Q13129;Q59GL0 Q13129 Q13129 RLF Zinc finger protein Rlf ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1058.9811 2 1054.47186 2106.92917 NaN NaN NaN -1.2301 -0.0012971 NaN NaN NaN NaN 109.29 0.43937 109.29 109.03 109.47 0 0 0 0 0.05353 1 61995 30.905 19.961 1 NaN NaN 0 1453300 0 1453300 11644 1705 4434 4554 18165 18165 FSDFLLDPYK 10 1 0 Unmodified _FSDFLLDPYK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8206 2 622.813522 1243.61249 NaN NaN NaN 0.22631 0.00014095 NaN NaN NaN NaN 109.46 0.78218 109.46 109.13 109.91 0 0 0 0 0.008091 1 70035 65.305 49.643 1 NaN NaN 0 49911000 0 49911000 11645 2103 4435 4555 18166 18166 FSDFLLDPYK 10 1 0 Unmodified _FSDFLLDPYK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8206 2 622.813522 1243.61249 76966.38 0.78937 0.00049163 0.10213 6.3608E-05 0.8915 0.00055524 622.813894068131 626.820625087607 121.02 1.1295 121.02 120.8 121.93 0 165 55 7 0 0 0 0.00038819 2 71904 87.913 81.707 1 47.049 38.412 0 33186000 1388100 31798000 11646 2103 4435 4555 18167;18168 18167 FSDFLLDPYK 10 1 0 Unmodified _FSDFLLDPYK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.8213 2 622.813522 1243.61249 76281.69 0.74164 0.00046191 0.14808 9.2226E-05 0.88973 0.00055413 622.814047022077 626.820587538184 120.84 1.0288 120.84 120.58 121.61 0 173 50 6 0 0 0 5.0594E-08 2 70834 115.71 106.5 1 34.923 28.032 0 18122000 760040 17362000 11647 2103 4435 4555 18169;18170 18169 FSDFPLSK 8 1 0 Unmodified _FSDFPLSK_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.7498 2 470.742368 939.470183 89426.68 0.018094 8.5174E-06 0.058691 2.7628E-05 0.076785 3.6146E-05 470.74237256854 474.749490849357 72.319 0.45765 72.319 72.106 72.563 0 135 34 6 0 0 0 0.031343 1 42389 51.346 13.787 1 0.90954 0.89085 0 21978000 11419000 10559000 11648 1708 4436 4556 18171 18171 FSDFPLSK 8 1 0 Unmodified _FSDFPLSK_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.7496 2 470.742368 939.470183 89097.31 0.12282 5.7819E-05 -0.13314 -6.2677E-05 -0.01032 -4.858E-06 470.742257707266 474.749438574299 71.014 0.37881 71.014 70.858 71.237 0 127 26 6 0 0 0 0.0078194 1 42450 81.296 25.286 1 0.88891 0.95134 0 23018000 11989000 11029000 11649 1708 4436 4556 18172 18172 FSDLFSLAEEYEDSSTKPPK 20 2 0 Unmodified _FSDLFSLAEEYEDSSTKPPK_ 0 0 1 Q68E01 Q68E01 Q68E01 INTS3 Integrator complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.3626 3 764.030234 2289.06887 70021.98 0.72691 0.00055538 0.0063879 4.8806E-06 0.7333 0.00056026 764.030100288082 769.373699377221 113.08 0.37717 113.08 112.9 113.28 -7.6294E-06 86 25 6 0 0 0 0.0020956 1 73332 29.603 29.603 1 1.4331 1.6323 0 9541300 3724700 5816600 11650 1840 4437 4557 18173 18173 FSDQFPLPLK 10 1 0 Unmodified _FSDQFPLPLK_ 0 0 0 A0A024RAM0;Q92973;S4R398 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.3307 2 596.324057 1190.63356 NaN NaN NaN -0.71157 -0.00042432 NaN NaN NaN NaN 108.2 0.59351 108.2 107.94 108.53 7.6294E-06 0 0 0 0.011602 1 67533 61.679 45.797 1 NaN NaN 0 9303500 0 9303500 11651 309 4438 4558 18174 18174 FSDSHNALR 9 0 1 Unmodified _FSDSHNALR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 349.5053 3 349.505312 1045.49411 101670.4 0.10376 3.6266E-05 1.0633 0.00037163 1.1671 0.0004079 349.50528842646 352.841104921869 19.838 0.3711 19.838 19.706 20.078 0 27 13 5 0 0 0 0.026221 1 6326 32.999 26.566 1 0.33986 0.34637 0 6912600 5559000 1353500 11652 1937 4439 4559 18175 18175 FSEAEHWLDYFPPLAIQDLK 20 1 0 Unmodified _FSEAEHWLDYFPPLAIQDLK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q6NVI4 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.0776 3 807.070476 2418.1896 69061.33 1.2273 0.00099052 -0.36517 -0.00029471 0.86214 0.00069581 807.403466188434 810.076287125566 133.21 0.22342 133.21 133.1 133.32 0 25 6 8 0 0 0 2.0776E-06 2 87173 52.814 52.814 1 1.2499 1.2304 0 19779000 9002800 10776000 11653 883 4440 4560 18176;18177 18176 FSEAEHWLDYFPPLAIQDLK 20 1 0 Unmodified _FSEAEHWLDYFPPLAIQDLK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q6NVI4 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.071 3 807.070476 2418.1896 67532.41 0.79607 0.00064249 -0.19306 -0.00015581 0.60301 0.00048667 807.070200877773 810.076325561971 133.17 0.18701 133.17 133.08 133.26 0 25 5 8 0 0 0 0.023528 1 89406 18.296 18.296 1 1.4408 1.5427 0 37047000 13882000 23166000 11654 883 4440 4560 18178 18178 FSEGNILELLHR 12 0 1 Unmodified _FSEGNILELLHR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.9291 3 476.592898 1426.75686 87226.34 0.20359 9.7029E-05 0.033346 1.5893E-05 0.23694 0.00011292 476.592821726185 479.928942532579 109.52 1.2404 109.52 109.03 110.27 0 474 87 8 0 0 0 1.568E-08 2 68385 95.417 90.695 1 0.83331 0.96831 0 179710000 99575000 80133000 11655 1995 4441 4561 18179;18180 18180 FSEGNILELLHR 12 0 1 Unmodified _FSEGNILELLHR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.386 2 714.385708 1426.75686 72208.41 0.75514 0.00053946 -0.37685 -0.00026921 0.3783 0.00027025 714.38532225576 719.38945067523 109.53 0.64479 109.53 109.2 109.84 0 231 48 7 0 0 0 0.00018679 3 68674 91.549 91.549 1 0.78071 0.79992 0 26047000 16222000 9825700 11656 1995 4441 4561 18181;18182;18183 18183 FSEGNILELLHR 12 0 1 Unmodified _FSEGNILELLHR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.593 3 476.592898 1426.75686 87079.84 0.15071 7.1829E-05 0.014223 6.7787E-06 0.16494 7.8608E-05 476.592866631069 479.928955206049 108.67 0.97598 108.67 108.18 109.16 0 402 69 9 0 0 0 5.7036E-05 2 69386 90.793 90.793 1 0.82033 0.93336 0 114890000 62125000 52769000 11657 1995 4441 4561 18184;18185 18185 FSEGNILELLHR 12 0 1 Unmodified _FSEGNILELLHR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.3905 2 714.385708 1426.75686 NaN NaN NaN -0.057979 -4.1419E-05 NaN NaN NaN NaN 108.58 0.56716 108.58 108.33 108.9 0 0 0 0 0.0020618 1 69442 70.942 52.63 1 NaN NaN 0 8840100 0 8840100 11658 1995 4441 4561 18186 18186 FSEGNILELLHR 12 0 1 Unmodified _FSEGNILELLHR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 479.929 3 476.592898 1426.75686 86891.81 0.16846 8.0286E-05 0.090856 4.3301E-05 0.25931 0.00012359 476.592932020649 479.928979986931 120.18 0.90321 120.18 119.97 120.87 0 215 41 10 0 0 0 4.0266E-06 2 71234 97.463 92.897 1 1.5594 1.3409 0 46363000 17973000 28390000 11659 1995 4441 4561 18187;18188 18187 FSEGNILELLHR 12 0 1 Unmodified _FSEGNILELLHR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 479.9286 3 476.592898 1426.75686 87786.15 0.52379 0.00024963 -0.31837 -0.00015173 0.20542 9.7902E-05 476.592769852496 479.928795377437 119.88 0.73982 119.88 119.68 120.42 0 191 33 9 0 0 0 5.1457E-05 2 70125 79.633 70.583 1 1.6143 1.4084 0 55625000 20251000 35374000 11660 1995 4441 4561 18189;18190 18189 FSEGNILELLHR 12 0 1 Unmodified _FSEGNILELLHR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.3887 2 714.385708 1426.75686 69990.31 0.84116 0.00060091 1.5157 0.0010828 2.3569 0.0016837 714.892184090958 719.390100013562 119.88 0.64903 119.88 119.72 120.37 0 107 28 7 0 0 0 0.012991 2 70151 49.466 44.77 1 0.74423 0.62811 0 17811000 7643600 10168000 11661 1995 4441 4561 18191;18192 18191 FSEIPQR 7 0 1 Unmodified _FSEIPQR_ 0 0 0 A0A024R137;A0A024R102;Q96GM5;F8VUB0;A8K9I5;F8VRQ4 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 438.7322 2 438.732335 875.450116 92632.17 -0.081577 -3.5791E-05 -0.025142 -1.1031E-05 -0.10672 -4.6821E-05 438.732300612836 443.736241411361 33.449 0.40897 33.449 33.208 33.617 3.8147E-06 103 34 4 0 0 0 0.014567 1 16769 99.919 66.562 1 0.80657 0.81229 0 10737000 6019300 4717500 11662 65 4442 4562 18193 18193 FSFSFSNK 8 1 0 Unmodified _FSFSFSNK_ 0 0 0 O75151;Q8N359;B4DH04 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.2322 2 482.232168 962.449782 90610.9 0.28458 0.00013724 0.4412 0.00021276 0.72579 0.00035 482.232128690142 486.239530111774 80.622 0.65784 80.622 80.279 80.937 0 147 56 4 0 0 0 0.017218 1 47953 60.59 43.204 1 1.1479 1.1332 0 8458400 3409800 5048600 11663 1400 4443 4563 18194 18194 FSFSFSNK 8 1 0 Unmodified _FSFSFSNK_ 0 0 0 O75151;Q8N359;B4DH04 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2322 2 482.232168 962.449782 88882 0.47677 0.00022991 -0.23889 -0.0001152 0.23788 0.00011471 482.232059427297 486.239167364944 79.447 0.57344 79.447 79.145 79.719 0 135 46 4 0 0 0 0.0395 1 48228 47.574 25.443 1 1.2008 1.245 0 9833900 4970100 4863900 11664 1400 4443 4563 18195 18195 FSFTLPYPVK 10 1 0 Unmodified _FSFTLPYPVK_ 0 0 0 Q9P035;H3BRL8;H3BPZ1;H3BS72 Q9P035 Q9P035 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.8369 2 599.828975 1197.6434 80946.33 0.72991 0.00043782 -0.48603 -0.00029153 0.24389 0.00014629 599.828712063832 603.835979688863 115.5 0.48677 115.5 115.3 115.79 0 137 33 6 0 0 0 0.00033362 2 73460 89.698 89.698 1 0.97373 0.98947 0 10295000 5939800 4355300 11665 2091 4444 4564 18196;18197 18197 FSFTLPYPVK 10 1 0 Unmodified _FSFTLPYPVK_ 0 0 0 Q9P035;H3BRL8;H3BPZ1;H3BS72 Q9P035 Q9P035 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8295 2 599.828975 1197.6434 79396.59 0.89184 0.00053495 -0.56183 -0.000337 0.33001 0.00019795 599.828589797813 603.83570631828 114.9 0.46078 114.9 114.69 115.15 0 124 29 5 0 0 0 2.0888E-06 2 74928 111.17 111.17 1 1.0039 1.0021 0 14650000 7590300 7059700 11666 2091 4444 4564 18198;18199 18199 FSFTLPYPVK 10 1 0 Unmodified _FSFTLPYPVK_ 0 0 0 Q9P035;H3BRL8;H3BPZ1;H3BS72 Q9P035 Q9P035 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.8372 2 599.828975 1197.6434 83520.45 0.55559 0.00033326 0.11649 6.9876E-05 0.67208 0.00040313 599.828805103849 603.836211251816 127.19 0.4507 127.19 126.92 127.37 0 73 19 6 0 0 0 0.0022483 2 76568 69.954 69.954 1 0.95888 0.78566 0 2478700 1369900 1108700 11667 2091 4444 4564 18200;18201 18200 FSFTLPYPVK 10 1 0 Unmodified _FSFTLPYPVK_ 0 0 0 Q9P035;H3BRL8;H3BPZ1;H3BS72 Q9P035 Q9P035 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.829 2 599.828975 1197.6434 79853.75 0.64389 0.00038622 0.23231 0.00013935 0.8762 0.00052557 599.828914732021 603.836200881988 126.97 0.42005 126.97 126.77 127.19 0 60 19 4 0 0 0 0.0079558 2 75510 56.729 56.729 1 0.85678 0.66656 0 2138900 1168700 970230 11668 2091 4444 4564 18202;18203 18203 FSGDLDDQTCR 11 0 1 Unmodified _FSGDLDDQTCR_ 0 0 0 B5BUB5;P05455;Q14730 B5BUB5 B5BUB5 SSB Lupus La protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.2809 2 657.274966 1312.53538 75826.77 0.59666 0.00039217 0.21464 0.00014107 0.8113 0.00053325 657.275156728044 662.279278486969 33.569 0.36389 33.569 33.386 33.75 0 75 28 4 0 0 0 0.00045221 1 16838 77.379 68.516 1 1.3395 1.3319 0 8384900 3437800 4947100 11669 1077 4445 4565 18204 18204 FSGEEGEIEDDESGTENR 18 0 1 Unmodified _FSGEEGEIEDDESGTENR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1005.9095 2 1000.4036 1998.79265 NaN NaN NaN -0.47392 -0.00047411 NaN NaN NaN NaN 41.566 0.24255 41.566 41.461 41.704 0 0 0 0 4.8028E-09 1 21951 81.494 81.494 1 NaN NaN 0 2376400 0 2376400 11670 2128 4446 4566 18205 18205 FSGEEGEIEDDESGTENR 18 0 1 Unmodified _FSGEEGEIEDDESGTENR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1005.4078 2 1000.4036 1998.79265 62188.59 0.39641 0.00039657 0.184 0.00018407 0.58041 0.00058065 1000.40508060233 1005.40761928821 40.762 0.25005 40.762 40.649 40.899 0 30 16 4 0 0 0 1.1551E-05 1 21800 78.814 77.624 1 1.3129 1.3042 0 7297500 2664200 4633400 11671 2128 4446 4566 18206 18206 FSGEEGEIEDDESGTENR 18 0 1 Unmodified _FSGEEGEIEDDESGTENR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1000.4058 2 1000.4036 1998.79265 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.802 1 40.802 40.302 41.302 3.8147E-06 0 0 0 0.031272 1 21855 40.066 39.775 1 11672 2128 4446 4566 18207 18207 FSGEEGEIEDDESGTENREEK 21 1 1 Unmodified _FSGEEGEIEDDESGTENREEK_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.3401 3 795.99821 2384.9728 68879.39 0.70542 0.00056151 -0.07307 -5.8163E-05 0.63235 0.00050335 796.332542005147 802.339846558313 33.941 0.46671 33.941 33.725 34.192 0 188 44 7 0 0 0 3.8852E-16 4 16866 109.37 109.37 1 1.5243 1.6938 0 19598000 6110900 13487000 11673 2128 4447 4567 18208;18209;18210;18211 18208 FSGEEGEIEDDESGTENREEK 21 1 1 Unmodified _FSGEEGEIEDDESGTENREEK_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.9996 3 795.99821 2384.9728 67955.74 0.57269 0.00045586 0.27514 0.00021901 0.84783 0.00067487 796.332780238636 802.005954202933 33.231 0.3993 33.231 33.03 33.43 0 193 35 8 0 0 0 6.2793E-16 3 16550 107.33 107.1 1 1.5677 1.8162 0 34479000 13523000 20956000 11674 2128 4447 4567 18212;18213;18214 18214 FSGEEGEIEDDESGTENREEK 21 1 1 Unmodified _FSGEEGEIEDDESGTENREEK_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 802.3388 3 795.99821 2384.9728 65641.45 0.42161 0.0003356 -0.24137 -0.00019213 0.18024 0.00014347 796.332251696279 802.005908820263 40.323 0.44268 40.323 40.114 40.556 0 164 32 9 0 0 0 5.2276E-07 1 18519 52.541 52.541 1 1.6456 1.3633 0 5686300 2134900 3551500 11675 2128 4447 4567 18215 18215 FSGEEGEIEDDESGTENREEK 21 1 1 Unmodified _FSGEEGEIEDDESGTENREEK_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 802.0059 3 795.99821 2384.9728 67467.75 0.34096 0.0002714 -0.044542 -3.5456E-05 0.29642 0.00023595 795.997679204947 802.005682209606 40.767 0.50159 40.767 40.525 41.027 0 214 39 8 0 0 0 4.8455E-07 1 18238 53.359 53.359 1 1.671 1.406 0 4361200 1553100 2808100 11676 2128 4447 4567 18216 18216 FSGGFGAR 8 0 1 Unmodified _FSGGFGAR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E132;A0A0J9YVQ7;A0A087WVZ1 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.6984 2 399.698295 797.382037 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.891 1 31.891 31.391 32.391 0 0 0 0 0.026145 1 15757 64.757 27.729 1 11677 522 4448 4568 18217 18217 FSGGFGAR 8 0 1 Unmodified _FSGGFGAR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E132;A0A0J9YVQ7;A0A087WVZ1 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 399.6982 2 399.698295 797.382037 96252.59 0.076578 3.0608E-05 0.049117 1.9632E-05 0.1257 5.024E-05 399.698147310868 404.702510283993 31.334 0.98721 31.334 30.6 31.588 1.9073E-06 301 85 6 0 0 0 0.0012944 2 15349 110.34 88.499 1 1.8027 1.9712 0 35237000 11803000 23434000 11678 522 4448 4568 18218;18219 18218 FSGGWR 6 0 1 Unmodified _FSGGWR_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 355.1743 2 355.174456 708.334358 103559.4 -0.082405 -2.9268E-05 -0.019622 -6.9692E-06 -0.10203 -3.6237E-05 355.174401738773 360.17842793212 30.237 0.28031 30.237 30.101 30.382 0 77 22 5 0 0 0 0.040624 1 14771 107.29 92.741 1 0.66955 0.72733 0 28329000 16170000 12159000 11679 1926 4449 4569 18220 18220 FSGQIER 7 0 1 Unmodified _FSGQIER_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.7163 2 418.716685 835.418816 92202.86 -0.067228 -2.815E-05 0.10763 4.5065E-05 0.040399 1.6916E-05 418.716589369978 423.720788791746 24.633 0.49605 24.633 24.42 24.916 0 78 21 6 0 0 0 0.0099511 2 10310 114.72 55.112 1 0.97374 1.084 0 79313000 39826000 39487000 11680 339 4450 4570 18221;18222 18222 FSGQIER 7 0 1 Unmodified _FSGQIER_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.7167 2 418.716685 835.418816 93869.4 0.023898 1.0007E-05 -0.04818 -2.0174E-05 -0.024282 -1.0167E-05 418.71659556254 423.720685409803 24.395 0.39814 24.395 24.196 24.594 0 74 17 6 0 0 0 0.016891 2 10102 97.602 43.077 1 0.92708 1.0795 0 61140000 30751000 30389000 11681 339 4450 4570 18223;18224 18224 FSGQIER 7 0 1 Unmodified _FSGQIER_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 418.7168 2 418.716685 835.418816 94164.54 -0.29673 -0.00012425 0.17084 7.1535E-05 -0.12589 -5.2711E-05 418.716654004189 423.720740289223 27.136 0.61705 27.136 26.859 27.476 0 121 31 7 0 0 0 0.028834 2 10432 71.296 17.972 1 1.1777 1.0104 0 8369000 3573100 4795900 11682 339 4450 4570 18225;18226 18225 FSGVNEQPPVVLAVK 15 1 0 Unmodified _FSGVNEQPPVVLAVK_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.9522 2 792.443223 1582.87189 69420.17 0.73902 0.00058563 0.042649 3.3797E-05 0.78167 0.00061943 792.443221696566 796.951771004281 97.265 0.65582 97.265 96.959 97.615 -7.6294E-06 288 58 7 0 0 0 3.9327E-10 2 59294 150.04 148.29 1 1.4817 1.6127 0 48840000 16839000 32001000 11683 1945 4451 4571 18227;18228 18228 FSGVNEQPPVVLAVK 15 1 0 Unmodified _FSGVNEQPPVVLAVK_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.9454 2 792.443223 1582.87189 69676.59 0.89636 0.00071031 -0.049523 -3.9244E-05 0.84684 0.00067107 792.443193673766 796.450023951408 96.555 0.61548 96.555 96.212 96.828 0 267 53 8 0 0 0 2.3633E-30 2 60139 152.64 152.64 1 1.3926 1.552 0 51798000 18646000 33152000 11684 1945 4451 4571 18229;18230 18230 FSGVNEQPPVVLAVK 15 1 0 Unmodified _FSGVNEQPPVVLAVK_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.4437 2 792.443223 1582.87189 67792.2 0.79354 0.00062884 -0.087107 -6.9027E-05 0.70644 0.00055981 792.443183516823 796.449995537736 110.32 0.76544 110.32 110.03 110.79 0 232 39 9 0 0 0 0.00022177 2 63687 98.898 98.898 1 2.6593 2.1732 0 33941000 9458800 24482000 11685 1945 4451 4571 18231;18232 18232 FSGVNEQPPVVLAVK 15 1 0 Unmodified _FSGVNEQPPVVLAVK_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 796.451 2 792.443223 1582.87189 68295.09 0.85421 0.00067691 -0.073531 -5.8269E-05 0.78068 0.00061864 792.443200147549 796.450141912082 110.14 0.68623 110.14 109.81 110.49 -7.6294E-06 220 37 10 0 0 0 3.5293E-06 2 62581 139.64 139.64 1 2.7334 2.2537 0 29872000 8179200 21692000 11686 1945 4451 4571 18233;18234 18233 FSHDAPPPGTK 11 1 0 Unmodified _FSHDAPPPGTK_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6;H0YMN5 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.2855 2 577.285463 1152.55637 78547.67 0.19858 0.00011464 -0.035772 -2.0651E-05 0.16281 9.3986E-05 577.284951502087 581.292701487194 17.399 0.46071 17.399 17.096 17.557 0 44 12 6 0 0 0 0.00044256 2 4393 78.136 69.954 1 0.56514 0.57138 0 8769300 5718800 3050500 11687 288 4452 4572 18235;18236 18236 FSIAPSSLDPSNR 13 0 1 Unmodified _FSIAPSSLDPSNR_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3;I3L2H5 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8979 2 695.851698 1389.68884 70823.84 0.66295 0.00046131 0.59163 0.00041168 1.2546 0.000873 695.851761052848 700.856572042662 85.883 0.66694 85.883 85.531 86.198 0 244 51 6 0 0 0 0.00061188 1 51564 88.596 77.499 1 0.99567 1.0186 0 31967000 16102000 15866000 11688 1604 4453 4573 18237 18237 FSIAPSSLDPSNR 13 0 1 Unmodified _FSIAPSSLDPSNR_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3;I3L2H5 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.8524 2 695.851698 1389.68884 71143.48 0.95724 0.0006661 0.060942 4.2407E-05 1.0182 0.00070851 695.851605376594 700.856039842784 84.91 0.63451 84.91 84.641 85.276 0 280 53 7 0 0 0 9.3579E-06 1 52173 100.88 100.88 1 1.0595 1.2314 0 63103000 29713000 33391000 11689 1604 4453 4573 18238 18238 FSIAPSSLDPSNR 13 0 1 Unmodified _FSIAPSSLDPSNR_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3;I3L2H5 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 700.8569 2 695.851698 1389.68884 72242.02 0.53911 0.00037514 0.31966 0.00022243 0.85876 0.00059757 695.851749263006 700.856094595602 98.128 0.7393 98.128 97.748 98.487 0 207 48 6 0 0 0 0.011281 2 55195 40.727 33.839 1 1.4216 1.2217 0 6517200 2736300 3780900 11690 1604 4453 4573 18239;18240 18239 FSIAPSSLDPSNR 13 0 1 Unmodified _FSIAPSSLDPSNR_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3;I3L2H5 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.8577 2 695.851698 1389.68884 72141.23 0.55976 0.00038951 0.19633 0.00013661 0.75608 0.00052612 695.851659640253 700.855934886995 98.007 0.81108 98.007 97.616 98.427 0 206 50 6 0 0 0 0.0037869 2 54285 49.189 43.228 1 1.5001 1.2484 0 6168200 2365900 3802300 11691 1604 4453 4573 18241;18242 18241 FSIQTMCPIEGEGNIAR 17 0 1 Oxidation (M) _FSIQTM(ox)CPIEGEGNIAR_ FSIQTM(1)CPIEGEGNIAR FSIQTM(50.56)CPIEGEGNIAR 0 1 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 974.9608 2 969.956043 1937.89753 NaN NaN NaN -0.43265 -0.00041965 NaN NaN NaN NaN 84.465 0.19601 84.465 84.312 84.508 0 0 0 0 0.001553 2 50579 50.562 40.511 1 NaN NaN 0 5958500 0 5958500 11692 32 4454 4574 18243;18244 18243 17 FSIQTMCPIEGEGNIAR 17 0 1 Oxidation (M) _FSIQTM(ox)CPIEGEGNIAR_ FSIQTM(1)CPIEGEGNIAR FSIQTM(62.89)CPIEGEGNIAR 0 1 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 974.9578 2 969.956043 1937.89753 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.631 1 83.631 83.131 84.131 0 0 0 0 0.0002266 1 51279 62.89 53.701 1 11693 32 4454 4574 18245 18245 17 FSISAHGK 8 1 0 Unmodified _FSISAHGK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q59F96;H0YGW7;Q5STZ8 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.727 2 423.727052 845.439552 91217.45 0.046764 1.9815E-05 0.18746 7.9432E-05 0.23422 9.9247E-05 423.726877431849 427.734263603793 23.774 0.41873 23.774 23.642 24.061 0 73 20 5 0 0 0 0.012282 2 9610 67.981 46.053 1 0.69257 0.7522 0 46523000 24469000 22055000 11694 1926 4455 4575 18246;18247 18246 FSISAHGK 8 1 0 Unmodified _FSISAHGK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q59F96;H0YGW7;Q5STZ8 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.7339 2 423.727052 845.439552 NaN NaN NaN 0.20306 8.6044E-05 NaN NaN NaN NaN 23.354 0.44362 23.354 23.202 23.646 0 0 0 0 0.015955 1 9214 67.981 42.982 1 NaN NaN 0 23373000 0 23373000 11695 1926 4455 4575 18248 18248 FSLDFNLR 8 0 1 Unmodified _FSLDFNLR_ 0 0 0 P25490;H0YJV7;O15391;Q96MM3 P25490 P25490 YY1;YY2;ZFP42 Transcriptional repressor protein YY1;Transcription factor YY2;Zinc finger protein 42 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.2665 2 506.266542 1010.51853 NaN NaN NaN -0.25744 -0.00013033 NaN NaN NaN NaN 108.09 0.4 108.09 107.97 108.37 0 0 0 0 0.023118 1 69080 63.48 45.444 1 NaN NaN 0 2991100 2991100 0 11696 1516 4456 4576 18249 18249 FSLENNFLLQHNIR 14 0 1 Unmodified _FSLENNFLLQHNIR_ 0 0 0 J3KPM9;P42224;E7EPD2;D2KFR9;E7ENM1 J3KPM9 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.6471 3 582.309161 1743.90565 82140.2 0.88517 0.00051544 0.14171 8.2522E-05 1.0269 0.00059797 582.643450945761 585.645566461432 113.04 0.28355 113.04 112.93 113.21 0 44 12 5 0 0 0 0.053082 1 65828 20.236 20.236 1 1.5455 1.3673 0 1497200 575570 921630 11697 1326 4457 4577 18250 18250 FSLIDLAGNER 11 0 1 Unmodified _FSLIDLAGNER_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.8293 2 617.824952 1233.63535 75308.62 0.76546 0.00047292 0.97988 0.0006054 1.7453 0.0010783 617.824730743344 622.828928959461 107.18 0.80452 107.18 106.76 107.56 0 334 62 7 0 0 0 0.00010563 4 66503 96.89 69.775 1 0.96135 0.98351 0 32085000 16309000 15776000 11698 804 4458 4578 18251;18252;18253;18254 18253 FSLIDLAGNER 11 0 1 Unmodified _FSLIDLAGNER_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8293 2 617.824952 1233.63535 76097.98 0.69483 0.00042928 1.2936 0.00079923 1.9884 0.0012285 617.824855163864 623.332612784387 106.47 0.86182 106.47 106.08 106.94 0 321 66 7 0 0 0 0.00042272 4 67657 79.693 64.865 1 0.99985 1.1319 0 47836000 25131000 22705000 11699 804 4458 4578 18255;18256;18257;18258 18257 FSLIDLAGNER 11 0 1 Unmodified _FSLIDLAGNER_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.8251 2 617.824952 1233.63535 NaN NaN NaN 1.918 0.001185 NaN NaN NaN NaN 118.35 0.64452 118.35 118 118.64 7.6294E-06 0 0 0 0.0074888 1 69855 62.303 43.324 1 NaN NaN 0 2627900 2627900 0 11700 804 4458 4578 18259 18259 FSLIDLAGNER 11 0 1 Unmodified _FSLIDLAGNER_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.8289 2 617.824952 1233.63535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.44 1 118.44 117.94 118.94 0 0 0 0 0.00084361 1 69953 70.1 48.636 1 11701 804 4458 4578 18260 18260 FSLIDLAGNER 11 0 1 Unmodified _FSLIDLAGNER_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.3274 2 617.824952 1233.63535 NaN NaN NaN -0.47331 -0.00029242 NaN NaN NaN NaN 118.25 0.50265 118.25 118.02 118.52 -7.6294E-06 0 0 0 0.0097635 1 68808 59.426 48.275 1 NaN NaN 0 3578300 3578300 0 11702 804 4458 4578 18261 18261 FSLIDLAGNER 11 0 1 Unmodified _FSLIDLAGNER_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.8296 2 617.824952 1233.63535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.17 1 118.17 117.67 118.67 0 0 0 0 0.025366 1 68854 51.092 32.78 1 11703 804 4458 4578 18262 18262 FSLLPTEQPR 10 0 1 Unmodified _FSLLPTEQPR_ 0 0 0 A0A0C4DGT6;Q96AP0;R4GNJ5 A0A0C4DGT6 A0A0C4DGT6 ACD Adrenocortical dysplasia protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.3297 2 594.324588 1186.63462 78617.95 0.64311 0.00038222 -0.16489 -9.8001E-05 0.47822 0.00028422 594.324586206962 599.328551074199 89.034 0.14337 89.034 88.957 89.101 0 36 9 6 0 0 0 5.0594E-08 2 53728 115.71 115.71 1 0.88995 0.90195 0 28488000 13589000 14899000 11704 517 4459 4579 18263;18264 18263 FSLLPTEQPR 10 0 1 Unmodified _FSLLPTEQPR_ 0 0 0 A0A0C4DGT6;Q96AP0;R4GNJ5 A0A0C4DGT6 A0A0C4DGT6 ACD Adrenocortical dysplasia protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8403 2 594.324588 1186.63462 78040.35 0.91527 0.00054397 -0.56261 -0.00033438 0.35266 0.00020959 594.323442214445 599.328958919876 87.908 0.39552 87.908 87.593 87.988 0 40 28 4 0 0 0 0.00029115 1 54194 91.087 80.377 1 0.69959 0.75899 0 27941000 16258000 11683000 11705 517 4459 4579 18265 18265 FSLLPTEQPR 10 0 1 Unmodified _FSLLPTEQPR_ 0 0 0 A0A0C4DGT6;Q96AP0;R4GNJ5 A0A0C4DGT6 A0A0C4DGT6 ACD Adrenocortical dysplasia protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.3293 2 594.324588 1186.63462 79468.3 0.43629 0.0002593 -0.06449 -3.8328E-05 0.3718 0.00022097 594.324120307786 599.328958950734 101.72 0.19766 101.72 101.59 101.79 -7.6294E-06 37 12 6 0 0 0 0.007051 2 57662 57.96 57.96 1 1.3483 1.1265 0 3361500 1442100 1919400 11706 517 4459 4579 18266;18267 18266 FSLLPTEQPR 10 0 1 Unmodified _FSLLPTEQPR_ 0 0 0 A0A0C4DGT6;Q96AP0;R4GNJ5 A0A0C4DGT6 A0A0C4DGT6 ACD Adrenocortical dysplasia protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.3289 2 594.324588 1186.63462 79065.54 0.50638 0.00030095 -0.2208 -0.00013123 0.28558 0.00016973 594.323682766861 599.329058202582 101.51 0.19735 101.51 101.4 101.6 0 43 11 6 0 0 0 0.03809 2 56653 39.547 39.547 1 1.1657 0.96716 0 5306900 2525900 2781000 11707 517 4459 4579 18268;18269 18268 FSLSQESSYIATQYSLRPR 19 0 2 Unmodified _FSLSQESSYIATQYSLRPR_ 0 0 1 Q14739;C9JXK0 Q14739 Q14739 LBR Lamin-B receptor MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 745.3812 3 745.046442 2232.1175 69635.98 1.0667 0.00079471 -0.17464 -0.00013011 0.89202 0.00066459 745.380255450671 752.388870494418 112.64 0.42099 112.64 112.44 112.86 0 107 21 9 0 0 0 0.00021226 1 65447 40.844 40.844 1 1.217 1.0256 0 10910000 5409300 5500800 11708 1743 4460 4580 18270 18270 FSLSQESSYIATQYSLRPR 19 0 2 Unmodified _FSLSQESSYIATQYSLRPR_ 0 0 1 Q14739;C9JXK0 Q14739 Q14739 LBR Lamin-B receptor MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 745.3804 3 745.046442 2232.1175 69377.7 0.6593 0.00049121 0.46371 0.00034549 1.123 0.0008367 745.380535987698 752.389052836529 112.51 0.53391 112.51 112.25 112.78 -7.6294E-06 131 27 7 0 0 0 0.00021226 2 64440 40.844 40.844 1 1.0181 0.93262 0 10634000 5685800 4947700 11709 1743 4460 4580 18271;18272 18272 FSLVDLAGNER 11 0 1 Unmodified _FSLVDLAGNER_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.8215 2 610.817127 1219.6197 78233.52 0.42283 0.00025827 -0.21169 -0.00012931 0.21113 0.00012896 610.81684171647 615.821338408519 99.6 0.97285 99.6 99.182 100.15 0 289 81 4 0 0 0 0.001099 1 60924 70.1 61.568 1 0.87848 0.98034 0 85180000 45220000 39960000 11710 626 4461 4581 18273 18273 FSLVDLAGNER 11 0 1 Unmodified _FSLVDLAGNER_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.8173 2 610.817127 1219.6197 77775.31 0.55208 0.00033722 -0.29621 -0.00018093 0.25587 0.00015629 610.816633509552 615.82129355767 98.757 0.94865 98.757 98.451 99.399 0 269 79 4 0 0 0 4.628E-08 2 61775 118.04 107.67 1 0.91718 1.0625 0 66700000 32446000 34254000 11711 626 4461 4581 18274;18275 18274 FSLVDLAGNER 11 0 1 Unmodified _FSLVDLAGNER_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.8209 2 610.817127 1219.6197 77559.43 0.72042 0.00044005 -0.92492 -0.00056496 -0.2045 -0.00012491 610.816026308253 615.820807696715 112.14 0.71568 112.14 111.84 112.56 0 167 42 6 0 0 0 0.00038999 1 65024 82.261 70.898 1 1.3418 1.1362 0 9392000 4276200 5115800 11712 626 4461 4581 18276 18276 FSLVDLAGNER 11 0 1 Unmodified _FSLVDLAGNER_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.8215 2 610.817127 1219.6197 77228.42 0.52558 0.00032104 -0.586 -0.00035794 -0.060418 -3.6904E-05 610.81633937802 615.820976524093 111.96 0.58936 111.96 111.7 112.28 0 149 30 7 0 0 0 0.0021173 2 63989 62.303 59.426 1 1.3002 1.0625 0 9224500 3880900 5343600 11713 626 4461 4581 18277;18278 18277 FSMGFIDSIIAK 12 1 0 Oxidation (M) _FSM(ox)GFIDSIIAK_ FSM(1)GFIDSIIAK FSM(60.43)GFIDSIIAK 0 1 0 B4DL07;P28288;B4DZ22 B4DL07 B4DL07 ABCD3 ATP-binding cassette sub-family D member 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.8547 2 672.847039 1343.67952 NaN NaN NaN 0.33068 0.0002225 NaN NaN NaN NaN 110.88 0.24598 110.88 110.72 110.96 7.6294E-06 0 0 0 0.0019881 1 69683 60.434 49.269 1 NaN NaN 0 7018700 0 7018700 11714 994 4462 4582 18279 18279 785 FSMGFIDSIIAK 12 1 0 Oxidation (M) _FSM(ox)GFIDSIIAK_ FSM(1)GFIDSIIAK FSM(78.66)GFIDSIIAK 0 1 0 B4DL07;P28288;B4DZ22 B4DL07 B4DL07 ABCD3 ATP-binding cassette sub-family D member 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 676.8538 2 672.847039 1343.67952 NaN NaN NaN -0.23883 -0.00016069 NaN NaN NaN NaN 110.22 0.34236 110.22 110.02 110.36 7.6294E-06 0 0 0 0.00043166 1 70927 78.655 62.452 1 NaN NaN 0 3748400 0 3748400 11715 994 4462 4582 18280 18280 785 FSNLLGTVYR 10 0 1 Unmodified _FSNLLGTVYR_ 0 0 0 Q15269;A0A0B4J2E5;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.3188 2 585.319306 1168.62406 78024.2 0.79654 0.00046623 -0.13157 -7.7011E-05 0.66497 0.00038922 585.318943867997 590.323736396732 92.16 1.0119 92.16 91.795 92.807 -7.6294E-06 472 96 7 0 0 0 3E-22 3 55812 166.07 155.6 1 0.82512 0.91897 0 80866000 42136000 38730000 11716 1756 4463 4583 18281;18282;18283 18282 FSNLLGTVYR 10 0 1 Unmodified _FSNLLGTVYR_ 0 0 0 Q15269;A0A0B4J2E5;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.3185 2 585.319306 1168.62406 77742.38 0.87527 0.00051231 -0.27368 -0.00016019 0.60159 0.00035212 585.318891897273 590.323750452154 91.096 0.95941 91.096 90.827 91.786 -7.6294E-06 393 83 8 0 0 0 0.00028571 2 56536 91.265 78.475 1 0.74871 0.85358 0 137590000 75199000 62388000 11717 1756 4463 4583 18284;18285 18285 FSNLLGTVYR 10 0 1 Unmodified _FSNLLGTVYR_ 0 0 0 Q15269;A0A0B4J2E5;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.323 2 585.319306 1168.62406 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.593 1 91.593 91.093 92.093 0 0 0 0 0.00012347 1 56710 81.263 53.182 1 11718 1756 4463 4583 18286 18286 FSNLLGTVYR 10 0 1 Unmodified _FSNLLGTVYR_ 0 0 0 Q15269;A0A0B4J2E5;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.3229 2 585.319306 1168.62406 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.678 1 91.678 91.178 92.178 0 0 0 0 0.032869 1 56772 49.489 27.743 1 11719 1756 4463 4583 18287 18287 FSNLLGTVYR 10 0 1 Unmodified _FSNLLGTVYR_ 0 0 0 Q15269;A0A0B4J2E5;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 590.3256 2 585.319306 1168.62406 79054.06 0.60267 0.00035276 0.14569 8.5277E-05 0.74837 0.00043803 585.319173391546 590.323547075418 105.5 1.3958 105.5 105.15 106.54 0 324 81 7 0 0 0 0.0059728 1 60098 59.426 59.426 1 1.2493 1.0482 0 25919000 10808000 15110000 11720 1756 4463 4583 18288 18288 FSNLLGTVYR 10 0 1 Unmodified _FSNLLGTVYR_ 0 0 0 Q15269;A0A0B4J2E5;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.3235 2 585.319306 1168.62406 79101.78 0.51522 0.00030157 0.20694 0.00012113 0.72216 0.0004227 585.319293787335 590.323610302861 105.31 0.88496 105.31 104.92 105.8 0 314 61 8 0 0 0 0.0026028 1 59125 68.335 68.335 1 1.2354 1.0728 0 24202000 10792000 13410000 11721 1756 4463 4583 18289 18289 FSNQETCVEIGESVR 15 0 1 Unmodified _FSNQETCVEIGESVR_ 0 0 0 Q53FW2;P60891;B1ALA7 Q53FW2 Q53FW2 PRPS1 Ribose-phosphate pyrophosphokinase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 882.9073 2 877.904333 1753.79411 NaN NaN NaN 0.43611 0.00038286 NaN NaN NaN NaN 67.123 0.40059 67.123 66.951 67.352 0 0 0 0 2.3505E-07 1 38739 102.87 94.985 1 NaN NaN 0 6435200 0 6435200 11722 1626 4464 4584 18290 18290 FSNQETCVEIGESVR 15 0 1 Unmodified _FSNQETCVEIGESVR_ 0 0 0 Q53FW2;P60891;B1ALA7 Q53FW2 Q53FW2 PRPS1 Ribose-phosphate pyrophosphokinase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.9095 2 877.904333 1753.79411 NaN NaN NaN 0.0411 3.6082E-05 NaN NaN NaN NaN 66.066 0.36476 66.066 65.87 66.235 0 0 0 0 2.5246E-05 1 38946 88.021 72.877 1 NaN NaN 0 8543800 0 8543800 11723 1626 4464 4584 18291 18291 FSNQETSVEIGESVR 15 0 1 Unmodified _FSNQETSVEIGESVR_ 0 0 0 A0A140VK41;P11908;B2R860;D3YTJ7;A6NMS2 A0A140VK41 A0A140VK41 PRPS2 Ribose-phosphate pyrophosphokinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 841.5435 2 841.405023 1680.79549 64838.65 0.61535 0.00051776 -1.6115 -0.001356 -0.99619 -0.0008382 841.404567428659 846.407307230251 63.782 0.61532 63.782 63.461 64.076 0 132 55 5 0 0 0 0.0020864 2 37505 45.915 39.532 1 3.8201 3.8169 0 16862000 4637500 12224000 11724 616 4465 4585 18292;18293 18293 FSNSSSSNEFSK 12 1 0 Unmodified _FSNSSSSNEFSK_ 0 0 0 CON__Q5D862;Q5D862 CON__Q5D862 CON__Q5D862 FLG2 Filaggrin-2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.7892 2 660.788763 1319.56297 NaN NaN NaN -0.65567 -0.00043326 NaN NaN NaN NaN 24.207 0.41717 24.207 23.976 24.393 0 0 0 0 3.7158E-47 1 9966 170.89 146.67 1 NaN NaN 0 11205000 11205000 0 + 11725 1174 4466 4586 18294 18294 FSNSSSSNEFSK 12 1 0 Unmodified _FSNSSSSNEFSK_ 0 0 0 CON__Q5D862;Q5D862 CON__Q5D862 CON__Q5D862 FLG2 Filaggrin-2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.787 2 660.788763 1319.56297 NaN NaN NaN -0.35575 -0.00023507 NaN NaN NaN NaN 23.888 0.39488 23.888 23.701 24.095 0 0 0 0 4.7078E-14 1 9690 129.82 115.15 1 NaN NaN 0 9432200 9432200 0 + 11726 1174 4466 4586 18295 18295 FSNSSSSNEFSK 12 1 0 Unmodified _FSNSSSSNEFSK_ 0 0 0 CON__Q5D862;Q5D862 CON__Q5D862 CON__Q5D862 FLG2 Filaggrin-2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.7892 2 660.788763 1319.56297 NaN NaN NaN 0.41974 0.00027736 NaN NaN NaN NaN 26.879 0.59288 26.879 26.528 27.121 0 0 0 0 0.00051216 1 10279 88.155 79.935 1 NaN NaN 0 2795100 2795100 0 + 11727 1174 4466 4586 18296 18296 FSNSSSSNEFSK 12 1 0 Unmodified _FSNSSSSNEFSK_ 0 0 0 CON__Q5D862;Q5D862 CON__Q5D862 CON__Q5D862 FLG2 Filaggrin-2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.2911 2 660.788763 1319.56297 NaN NaN NaN 0.30255 0.00019992 NaN NaN NaN NaN 26.991 0.45086 26.991 26.769 27.22 -1.9073E-06 0 0 0 0.03675 1 9799 45.077 40.137 1 NaN NaN 0 1979000 1979000 0 + 11728 1174 4466 4586 18297 18297 FSNTGEDWYVLVGVAK 16 1 0 Unmodified _FSNTGEDWYVLVGVAK_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.9543 2 892.946327 1783.8781 NaN NaN NaN -0.089211 -7.9661E-05 NaN NaN NaN NaN 117.17 0.34382 117.17 117.02 117.36 -7.6294E-06 0 0 0 0.010767 1 74921 47.288 34.088 1 NaN NaN 0 3537000 0 3537000 11729 764 4467 4587 18298 18298 FSNTGEDWYVLVGVAK 16 1 0 Unmodified _FSNTGEDWYVLVGVAK_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.9537 2 892.946327 1783.8781 NaN NaN NaN -0.43985 -0.00039276 NaN NaN NaN NaN 116.65 0.36678 116.65 116.5 116.87 0 0 0 0 3.1072E-06 1 76388 83.314 69.057 1 NaN NaN 0 6190800 0 6190800 11730 764 4467 4587 18299 18299 FSNTLELK 8 1 0 Unmodified _FSNTLELK_ 0 0 0 Q4KMR3;Q12965 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.261 2 476.260925 950.507297 NaN NaN NaN 0.62454 0.00029744 NaN NaN NaN NaN 57.207 0.56839 57.207 56.942 57.51 0 0 0 0 0.017989 1 33016 74.255 44.448 1 NaN NaN 0 13684000 13684000 0 11731 1703 4468 4588 18300 18300 FSNTLELK 8 1 0 Unmodified _FSNTLELK_ 0 0 0 Q4KMR3;Q12965 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.2678 2 476.260925 950.507297 88500.73 0.22645 0.00010785 -0.23957 -0.0001141 -0.013113 -6.245E-06 476.260742578455 480.267719789586 67.616 0.51852 67.616 67.371 67.89 0 107 35 4 0 0 0 0.033654 1 34514 49.833 31.698 1 1.7677 1.4032 0 2000100 616040 1384000 11732 1703 4468 4588 18301 18301 FSPAGPILSIR 11 0 1 Unmodified _FSPAGPILSIR_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YBN4;Q4VXU2;E5RJB9;E5RH24;E5RHG7;E5RGC4;E5RFD8 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.3386 2 579.337498 1156.66044 80689.57 0.73939 0.00042836 0.23298 0.00013498 0.97237 0.00056333 579.337600260749 584.341627455296 98.804 0.91818 98.804 98.386 99.304 0 329 75 6 0 0 0 0.0076189 2 60275 52.278 52.278 1 1.823 1.865 0 33274000 11373000 21902000 11733 273 4469 4589 18302;18303 18303 FSPAGPILSIR 11 0 1 Unmodified _FSPAGPILSIR_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YBN4;Q4VXU2;E5RJB9;E5RH24;E5RHG7;E5RGC4;E5RFD8 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3422 2 579.337498 1156.66044 80521.18 0.65621 0.00038017 0.25324 0.00014671 0.90945 0.00052688 579.337562731148 584.34165769532 98.018 0.78065 98.018 97.6 98.381 0 319 66 6 0 0 0 0.00038999 2 61225 82.261 82.261 1 1.7281 1.9936 0 71568000 26963000 44605000 11734 273 4469 4589 18304;18305 18305 FSPAGPVLSIR 11 0 1 Unmodified _FSPAGPVLSIR_ 0 0 0 B1ANR0;Q6IQ30;Q13310;B1ANR1 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.3337 2 572.329673 1142.64479 80255.54 0.73765 0.00042218 0.25787 0.00014759 0.99552 0.00056977 572.329624343444 577.333860049666 90.176 0.65805 90.176 89.663 90.321 7.6294E-06 177 52 6 0 0 0 0.021359 1 54259 43.308 23.531 1 1.9386 2.1417 0 56296000 17468000 38828000 11735 818 4470 4590 18306 18306 FSPAGPVLSIR 11 0 1 Unmodified _FSPAGPVLSIR_ 0 0 0 B1ANR0;Q6IQ30;Q13310;B1ANR1 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3345 2 572.329673 1142.64479 79245.52 0.68093 0.00038972 0.3515 0.00020117 1.0324 0.00059089 572.329515122555 577.333991455354 89.159 0.61105 89.159 88.697 89.308 -7.6294E-06 225 50 7 0 0 0 0.0015567 1 55035 66.595 43.855 1 2.0062 2.2853 0 105540000 38626000 66918000 11736 818 4470 4590 18307 18307 FSPDGELYASGSEDGTLR 18 0 1 Unmodified _FSPDGELYASGSEDGTLR_ 0 0 0 Q9Y3F4;B0AZV0;H0YH33 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 951.4308 2 950.931602 1899.84865 62255.57 0.74628 0.00070966 -0.14222 -0.00013524 0.60406 0.00057442 951.433062143773 955.935601715214 79.815 0.64032 79.815 79.529 80.169 0 257 55 8 0 0 0 3.0962E-05 2 47503 84.289 84.289 1 3.1449 3.1915 0 28923000 6693700 22229000 11737 2136 4471 4591 18308;18309 18309 FSPDGELYASGSEDGTLR 18 0 1 Unmodified _FSPDGELYASGSEDGTLR_ 0 0 0 Q9Y3F4;B0AZV0;H0YH33 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 950.9309 2 950.931602 1899.84865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.671 1 79.671 79.171 80.171 0 0 0 0 0.024669 1 47282 41.401 33.297 1 11738 2136 4471 4591 18310 18310 FSPDGELYASGSEDGTLR 18 0 1 Unmodified _FSPDGELYASGSEDGTLR_ 0 0 0 Q9Y3F4;B0AZV0;H0YH33 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 955.9352 2 950.931602 1899.84865 62895.88 0.70541 0.0006708 -0.06517 -6.1972E-05 0.64024 0.00060883 951.43286280851 955.935736909919 78.846 0.65424 78.846 78.581 79.236 -7.6294E-06 299 55 7 0 0 0 1.3259E-05 4 47734 77.527 77.527 1 3.0904 3.4083 0 41402000 11276000 30125000 11739 2136 4471 4591 18311;18312;18313;18314 18311 FSPDGELYASGSEDGTLR 18 0 1 Unmodified _FSPDGELYASGSEDGTLR_ 0 0 0 Q9Y3F4;B0AZV0;H0YH33 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 955.9377 2 950.931602 1899.84865 62219.82 0.55096 0.00052392 0.55098 0.00052394 1.1019 0.0010479 950.931036925267 955.936136848672 91.455 0.58015 91.455 91.199 91.779 0 196 42 7 0 0 0 0.0010494 1 50739 37.613 37.613 1 2.2843 1.9448 0 5442400 1182600 4259800 11740 2136 4471 4591 18315 18315 FSPDGELYASGSEDGTLR 18 0 1 Unmodified _FSPDGELYASGSEDGTLR_ 0 0 0 Q9Y3F4;B0AZV0;H0YH33 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 951.4324 2 950.931602 1899.84865 62545.59 0.32518 0.00030922 0.11361 0.00010804 0.43879 0.00041726 951.432756490743 955.93580208147 91.414 0.58716 91.414 91.204 91.791 0 190 41 7 0 0 0 0.011013 1 49912 25.718 25.718 1 2.3902 1.9976 0 4936100 1564200 3372000 11741 2136 4471 4591 18316 18316 FSPEFVDFTAQCLR 14 0 1 Unmodified _FSPEFVDFTAQCLR_ 0 0 0 C7DUW4;Q6FI23;Q6FHG1;Q53EZ9;P46734;J3KRV4 C7DUW4 C7DUW4 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.9105 2 858.906147 1715.79774 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.3 1 114.3 113.8 114.8 -7.6294E-06 0 0 0 0.015198 1 72520 47.302 37.647 1 11742 1124 4472 4592 18317 18317 FSPFPVQDRPESSLVFK 17 1 1 Unmodified _FSPFPVQDRPESSLVFK_ 0 0 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.6876 3 660.679031 1979.01526 73448.11 0.5084 0.00033589 0.64661 0.0004272 1.155 0.00076309 661.349938916532 666.686543448344 102.56 0.68989 102.56 102.19 102.88 0 252 58 6 0 0 0 0.0099405 1 63063 18.163 18.163 1 1.5376 1.7033 0 19025000 7427600 11598000 11743 619 4473 4593 18318 18318 FSPIPFPPLSYK 12 1 0 Unmodified _FSPIPFPPLSYK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.89 2 696.881739 1391.74892 72238.2 0.93665 0.00065273 0.011795 8.2197E-06 0.94844 0.00066095 696.881921596567 700.888647311096 121.87 0.7165 121.87 121.51 122.23 0 238 48 6 0 0 0 0.00021273 2 78736 81.338 72.805 1 0.87188 0.95226 0 50815000 24712000 26102000 11744 1854 4474 4594 18319;18320 18319 FSPIPFPPLSYK 12 1 0 Unmodified _FSPIPFPPLSYK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8895 2 696.881739 1391.74892 72924.68 1.1753 0.00081905 -0.20484 -0.00014275 0.97047 0.0006763 696.881772527982 700.888386495728 121.36 0.70988 121.36 120.99 121.7 0 273 48 7 0 0 0 0.0005793 2 80228 68.893 57.742 1 0.86431 0.89001 0 32482000 18344000 14138000 11745 1854 4474 4594 18321;18322 18321 FSPNLDSYGWLVSGGQSGLVR 21 0 1 Unmodified _FSPNLDSYGWLVSGGQSGLVR_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1125.0682 2 1120.06074 2238.10693 58257.02 0.47302 0.00052981 1.1447 0.0012822 1.6178 0.001812 1120.5636099604 1125.06689386526 121.82 0.40854 121.82 121.61 122.02 0 75 26 5 0 0 0 8.723E-05 1 78805 39.509 39.509 1 0.69956 0.70577 0 9516600 4731800 4784800 11746 1938 4475 4595 18323 18323 FSPNLDSYGWLVSGGQSGLVR 21 0 1 Unmodified _FSPNLDSYGWLVSGGQSGLVR_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1125.0638 2 1120.06074 2238.10693 59748.37 0.71424 0.00079999 0.12537 0.00014042 0.83961 0.00094041 1120.56204067683 1125.56530470522 121.3 0.34001 121.3 121.15 121.49 0 92 23 6 0 0 0 6.6219E-05 1 80340 41.967 41.967 1 0.88127 0.89114 0 9691500 5067900 4623700 11747 1938 4475 4595 18324 18324 FSPNLDSYGWLVSGGQSGLVR 21 0 1 Unmodified _FSPNLDSYGWLVSGGQSGLVR_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1125.0388 2 1120.06074 2238.10693 57142.76 0.53558 0.00059989 1.0222 0.001145 1.5578 0.0017449 1120.56316867437 1125.56649538046 134.14 0.22148 134.14 134.04 134.26 0 42 10 7 0 0 0 0.0035701 1 81782 37.555 37.555 1 1.307 1.1127 0 5431300 2242400 3188900 11748 1938 4475 4595 18325 18325 FSPNSSNPIIVSCGWDK 17 1 0 Unmodified _FSPNSSNPIIVSCGWDK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6REE5;D6RFX4;B4DVD2;H0Y8R5;D6RBD0 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 958.4581 2 954.45145 1906.88835 58205.16 0.3574 0.00034113 -1.6092 -0.0015359 -1.2518 -0.0011948 954.951815549803 958.456595957875 108.66 0.53532 108.66 108.42 108.95 7.6294E-06 174 27 8 0 0 0 0.00011163 2 61484 58.831 58.831 1 1.8435 1.4946 0 13250000 4991600 8258900 11749 1227 4476 4596 18326;18327 18327 FSPNTSQFLLVSSWDTSVR 19 0 1 Unmodified _FSPNTSQFLLVSSWDTSVR_ 0 0 0 J3QT28;A0A140VJF3;O43684;J3QSX4 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1091.0471 2 1086.04202 2170.06948 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.42 1 122.42 121.92 122.92 0 0 0 0 0.00011425 1 79258 65.805 52.605 1 11750 600 4477 4597 18328 18328 FSPNTSQFLLVSSWDTSVR 19 0 1 Unmodified _FSPNTSQFLLVSSWDTSVR_ 0 0 0 J3QT28;A0A140VJF3;O43684;J3QSX4 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1086.5447 2 1086.04202 2170.06948 61509.7 0.44455 0.0004828 0.75237 0.00081711 1.1969 0.0012999 1086.04331043426 1091.04740886489 121.94 0.38062 121.94 121.76 122.14 0 78 26 4 0 0 0 0.00022228 1 80809 45.79 45.79 1 0.97862 0.9741 0 7180100 4079800 3100300 11751 600 4477 4597 18329 18329 FSPTDFLAK 9 1 0 Unmodified _FSPTDFLAK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.2694 2 513.26875 1024.52295 85345.45 0.70547 0.0003621 0.10134 5.2013E-05 0.80681 0.00041411 513.268621906309 517.275892335437 98.454 0.90776 98.454 97.977 98.885 0 247 73 5 0 0 0 0.017976 1 59996 52.482 43.268 1 2.443 2.655 0 47170000 12680000 34490000 11752 1207 4478 4598 18330 18330 FSQELLSNGELNHLPLK 17 1 0 Unmodified _FSQELLSNGELNHLPLK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.3497 3 647.014302 1938.02108 75268.04 1.0267 0.0006643 -0.48065 -0.00031099 0.54607 0.00035331 647.347775766792 649.685495415824 100.35 1.4051 100.35 99.882 101.29 -7.6294E-06 456 111 6 0 0 0 3.8906E-07 2 61359 88.551 88.551 1 0.6252 0.70415 0 116510000 67621000 48885000 11753 1244 4479 4599 18331;18332 18332 FSQELLSNGELNHLPLK 17 1 0 Unmodified _FSQELLSNGELNHLPLK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.0184 2 970.017815 1938.02108 63235.75 0.49356 0.00047876 0.19341 0.00018761 0.68697 0.00066637 970.519027811292 974.025946405909 100.37 0.52388 100.37 100.09 100.61 0 149 45 5 0 0 0 0.0085681 1 61389 41.052 41.052 1 0.75683 0.77408 0 14336000 8144100 6192300 11754 1244 4479 4599 18333 18333 FSQELLSNGELNHLPLK 17 1 0 Unmodified _FSQELLSNGELNHLPLK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.014 3 647.014302 1938.02108 75343.87 0.8521 0.00055132 -0.09316 -6.0276E-05 0.75894 0.00049105 647.348650699839 649.685665149606 99.405 0.987 99.405 99.022 100.01 7.6294E-06 518 79 9 0 0 0 1.8884E-05 2 62107 75.445 75.445 1 0.67809 0.77502 0 157890000 94468000 63420000 11755 1244 4479 4599 18334;18335 18334 FSQELLSNGELNHLPLK 17 1 0 Unmodified _FSQELLSNGELNHLPLK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 974.0249 2 970.017815 1938.02108 63185.52 0.41248 0.00040011 0.51386 0.00049845 0.92634 0.00089857 970.017675774267 974.527678020133 99.437 0.57246 99.437 99.111 99.684 0 193 47 7 0 0 0 0.0045016 4 62184 51.135 51.135 1 0.73633 0.76953 0 19293000 10824000 8468400 11756 1244 4479 4599 18336;18337;18338;18339 18338 FSQELLSNGELNHLPLK 17 1 0 Unmodified _FSQELLSNGELNHLPLK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.0203 3 647.014302 1938.02108 74734.09 0.98787 0.00063916 -0.23299 -0.00015075 0.75488 0.00048842 647.014143909026 649.685511383737 112.49 0.98337 112.49 112.23 113.21 -7.6294E-06 255 48 9 0 0 0 4.4314E-13 3 65296 116.35 103.17 1 1.3927 1.1935 0 76323000 32891000 43432000 11757 1244 4479 4599 18340;18341;18342 18341 FSQELLSNGELNHLPLK 17 1 0 Unmodified _FSQELLSNGELNHLPLK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 974.0264 2 970.017815 1938.02108 61588.38 0.29013 0.00028143 0.23233 0.00022537 0.52246 0.0005068 970.017851823636 974.526355750794 112.47 0.37595 112.47 112.27 112.64 0 98 20 7 0 0 0 0.00090738 1 65327 62.162 62.162 1 1.4004 1.1096 0 10340000 4345300 5994400 11758 1244 4479 4599 18343 18343 FSQELLSNGELNHLPLK 17 1 0 Unmodified _FSQELLSNGELNHLPLK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.0207 3 647.014302 1938.02108 75153.93 0.69661 0.00045072 0.056573 3.6604E-05 0.75318 0.00048732 647.348585306097 649.685704871783 112.21 1.0656 112.21 111.98 113.04 0 285 53 8 0 0 0 4.9044E-07 2 64206 87.388 78.738 1 1.4653 1.235 0 53892000 22283000 31608000 11759 1244 4479 4599 18344;18345 18345 FSQISSQR 8 0 1 Unmodified _FSQISSQR_ 0 0 0 B4DZG2;A0A024R8C1;Q15361;A0A087WY09 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.7502 2 476.745973 951.477394 89285.59 0.11184 5.3318E-05 0.213 0.00010155 0.32484 0.00015487 476.745962847416 481.750344136429 21.748 0.40382 21.748 21.539 21.943 0 77 24 5 0 0 0 0.0067727 1 8000 85.813 44.511 1 0.37669 0.37764 0 9085000 6067700 3017200 11760 247 4480 4600 18346 18346 FSQLAEAYEVLSDEVK 16 1 0 Unmodified _FSQLAEAYEVLSDEVK_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 918.4606 2 914.454182 1826.89381 63805.29 0.68971 0.00063071 0.084713 7.7466E-05 0.77442 0.00070817 914.454463617657 918.46189499557 120.64 0.52337 120.64 120.36 120.88 0 209 37 8 0 0 0 2.1917E-08 2 77713 100.22 100.22 1 1.3904 1.3623 0 21479000 9753600 11725000 11761 1786 4481 4601 18347;18348 18347 FSQLAEAYEVLSDEVK 16 1 0 Unmodified _FSQLAEAYEVLSDEVK_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.4618 2 914.454182 1826.89381 64895.54 0.9959 0.0009107 -0.18643 -0.00017049 0.80946 0.00074022 914.454186562034 918.461376380405 120.14 0.60342 120.14 119.78 120.38 0 213 43 8 0 0 0 8.7368E-05 1 79215 80.522 80.522 1 1.2351 1.2934 0 24163000 10205000 13957000 11762 1786 4481 4601 18349 18349 FSQLAEAYEVLSDEVK 16 1 0 Unmodified _FSQLAEAYEVLSDEVK_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 918.4616 2 914.454182 1826.89381 64066.2 0.62966 0.00057579 0.022552 2.0622E-05 0.65221 0.00059642 914.454021250563 918.461950015077 133.64 0.51553 133.64 133.39 133.91 0 129 20 10 0 0 0 0.00015277 2 81374 66.533 66.533 1 0.92664 0.74103 0 8859300 4720500 4138800 11763 1786 4481 4601 18350;18351 18350 FSQLAEAYEVLSDEVK 16 1 0 Unmodified _FSQLAEAYEVLSDEVK_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 914.9556 2 914.454182 1826.89381 64206.5 0.93949 0.00085912 0.16291 0.00014898 1.1024 0.0010081 914.454146883636 918.461859944422 133.32 0.45412 133.32 133.15 133.61 1.5259E-05 99 16 8 0 0 0 0.0003636 2 80324 52.265 52.265 1 0.90886 0.74592 0 9121200 4503000 4618300 11764 1786 4481 4601 18352;18353 18353 FSQMLQDK 8 1 0 Oxidation (M) _FSQM(ox)LQDK_ FSQM(1)LQDK FSQM(71.88)LQDK 0 1 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.7413 2 506.742042 1011.46953 NaN NaN NaN -0.72042 -0.00036506 NaN NaN NaN NaN 25.858 0.59811 25.858 25.692 26.29 -1.9073E-06 0 0 0 0.0042153 1 9553 71.877 30.65 1 NaN NaN 0 1902200 1902200 0 11765 2037 4482 4602 18354 18354 1872 FSSALR 6 0 1 Unmodified _FSSALR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BRD0 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 345.6941 2 340.689939 679.365324 NaN NaN NaN 0.27653 9.4211E-05 NaN NaN NaN NaN 27.005 0.31107 27.005 26.851 27.162 0 0 0 0 0.054024 1 12318 69.39 10.729 1 NaN NaN 0 6793800 0 6793800 11766 1699 4483 4603 18355 18355 FSSCGGGGGSFGAGGGFGSR 20 0 1 Unmodified _FSSCGGGGGSFGAGGGFGSR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.3715 2 883.370992 1764.72743 NaN NaN NaN -0.28082 -0.00024807 NaN NaN NaN NaN 57.502 1.6196 57.502 57.138 58.758 0 0 0 0 4.4945E-18 2 32853 111.43 102.7 1 NaN NaN 0 258280000 258280000 0 + 11767 1308;1309 4484 4604 18356;18357 18357 FSSCGGGGGSFGAGGGFGSR 20 0 1 Unmodified _FSSCGGGGGSFGAGGGFGSR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.3701 2 883.370992 1764.72743 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.965 1 58.965 58.465 59.465 0 0 0 0 0.051628 1 33516 31.914 25.81 1 + 11768 1308;1309 4484 4604 18358 18358 FSSCGGGGGSFGAGGGFGSR 20 0 1 Unmodified _FSSCGGGGGSFGAGGGFGSR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.372 2 883.370992 1764.72743 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.617 1 64.617 64.117 65.117 0 0 0 0 0.0052107 1 37145 46.926 39.001 1 + 11769 1308;1309 4484 4604 18359 18359 FSSCGGGGGSFGAGGGFGSR 20 0 1 Unmodified _FSSCGGGGGSFGAGGGFGSR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.3712 2 883.370992 1764.72743 NaN NaN NaN -0.18504 -0.00016346 NaN NaN NaN NaN 56.383 1.5043 56.383 56.181 57.685 3.8147E-06 0 0 0 4.4945E-18 3 32442 111.43 104.44 1 NaN NaN 0 459580000 459580000 0 + 11770 1308;1309 4484 4604 18360;18361;18362 18360 FSSCGGGGGSFGAGGGFGSR 20 0 1 Unmodified _FSSCGGGGGSFGAGGGFGSR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 883.3714 2 883.370992 1764.72743 NaN NaN NaN -0.52576 -0.00046444 NaN NaN NaN NaN 67.018 1.8736 67.018 66.681 68.554 0 0 0 0 4.4464E-05 2 34723 61.641 55.608 1 NaN NaN 0 160280000 160280000 0 + 11771 1308;1309 4484 4604 18363;18364 18363 FSSCGGGGGSFGAGGGFGSR 20 0 1 Unmodified _FSSCGGGGGSFGAGGGFGSR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 883.3712 2 883.370992 1764.72743 NaN NaN NaN -0.32502 -0.00028712 NaN NaN NaN NaN 67.643 2.3414 67.643 67.287 69.629 0 0 0 0 1.5746E-05 2 34759 65.716 56.987 1 NaN NaN 0 122620000 122620000 0 + 11772 1308;1309 4484 4604 18365;18366 18365 FSSELEQIELHNSIR 15 0 1 Unmodified _FSSELEQIELHNSIR_ 0 0 0 H0Y9X1;Q96EY4;D6RA57;B7Z504 H0Y9X1 H0Y9X1 TMA16 Translation machinery-associated protein 16 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3073 3 601.307485 1800.90063 79175.02 0.5881 0.00035363 0.72699 0.00043715 1.3151 0.00079078 601.641714958914 604.644600093117 82.305 0.74821 82.305 82.044 82.792 0 192 64 4 0 0 0 0.0054179 1 50409 47.037 47.037 1 0.79322 0.81378 0 21091000 10889000 10202000 11773 1288 4485 4605 18367 18367 FSSELEQIELHNSIR 15 0 1 Unmodified _FSSELEQIELHNSIR_ 0 0 0 H0Y9X1;Q96EY4;D6RA57;B7Z504 H0Y9X1 H0Y9X1 TMA16 Translation machinery-associated protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.3069 3 601.307485 1800.90063 77021.23 0.49955 0.00030038 0.039346 2.3659E-05 0.53889 0.00032404 601.30770464892 604.643878060373 95.533 0.78748 95.533 95.217 96.004 0 242 53 7 0 0 0 0.025862 1 52648 16.071 16.071 1 0.55143 0.46429 0 4790900 3214500 1576400 11774 1288 4485 4605 18368 18368 FSSITAHPER 10 0 1 Unmodified _FSSITAHPER_ 0 0 0 Q8WUA4;Q53QN0;A0A087WZD8 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 382.1964 3 382.196367 1143.56727 96260.97 -0.17428 -6.661E-05 0.18537 7.0846E-05 0.011082 4.2356E-06 382.196331390541 385.532322831699 25.221 0.41915 25.221 25.05 25.469 1.9073E-06 84 19 8 0 0 0 0.00079872 1 10848 57.149 49.582 1 0.78481 0.8103 0 23934000 14246000 9687600 11775 1938 4486 4606 18369 18369 FSSITAHPER 10 0 1 Unmodified _FSSITAHPER_ 0 0 0 Q8WUA4;Q53QN0;A0A087WZD8 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.7912 2 572.790912 1143.56727 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.237 1 25.237 24.737 25.737 -1.9073E-06 0 0 0 2.7715E-05 1 10872 92.051 44.969 1 11776 1938 4486 4606 18370 18370 FSSITAHPER 10 0 1 Unmodified _FSSITAHPER_ 0 0 0 Q8WUA4;Q53QN0;A0A087WZD8 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.7911 2 572.790912 1143.56727 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.958 1 24.958 24.458 25.458 -1.9073E-06 0 0 0 5.1168E-05 1 10618 86.882 49.154 1 11777 1938 4486 4606 18371 18371 FSSSGDFLVAGVGQEHR 17 0 1 Unmodified _FSSSGDFLVAGVGQEHR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.9398 2 896.934282 1791.85401 64069.78 0.54525 0.00048906 -0.77742 -0.00069729 -0.23217 -0.00020824 897.434009746562 901.938497903923 89.24 0.92855 89.24 88.95 89.879 0 259 57 8 0 0 0 4.5201E-06 1 49312 86.803 86.803 1 0.8589 0.70793 0 11661000 5672900 5987700 11778 1389 4487 4607 18372 18372 FSSSGDFLVAGVGQEHR 17 0 1 Unmodified _FSSSGDFLVAGVGQEHR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.6283 3 598.291947 1791.85401 NaN NaN NaN -0.039583 -2.3682E-05 NaN NaN NaN NaN 89.243 1.9184 89.243 88.843 90.762 0 0 0 0 0.040072 1 49324 25.824 20.396 1 NaN NaN 0 38017000 0 38017000 11779 1389 4487 4607 18373 18373 FSSSGDFLVAGVGQEHR 17 0 1 Unmodified _FSSSGDFLVAGVGQEHR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 897.4355 2 896.934282 1791.85401 NaN NaN NaN -1.6145 -0.0014481 NaN NaN NaN NaN 89.153 0.90997 89.153 88.78 89.69 0 0 0 0 6.7438E-05 1 48389 72.681 63.493 1 NaN NaN 0 5045700 5045700 0 11780 1389 4487 4607 18374 18374 FSSSGDFLVAGVGQEHR 17 0 1 Unmodified _FSSSGDFLVAGVGQEHR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 901.9376 2 896.934282 1791.85401 NaN NaN NaN 0.25726 0.00023075 NaN NaN NaN NaN 89.107 0.85537 89.107 88.78 89.635 7.6294E-06 0 0 0 0.011611 1 48422 42.209 34.665 1 NaN NaN 0 4637500 0 4637500 11781 1389 4487 4607 18375 18375 FSSSSGYGGGSSR 13 0 1 Unmodified _FSSSSGYGGGSSR_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.2686 2 618.267998 1234.52144 NaN NaN NaN -0.018077 -1.1176E-05 NaN NaN NaN NaN 19.046 0.51835 19.046 18.784 19.302 0 0 0 0 1.2224E-06 1 5721 104.79 99.313 1 NaN NaN 0 19199000 19199000 0 + 11782 1165 4488 4608 18376 18376 FSSYHVK 7 1 0 Unmodified _FSSYHVK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.2212 2 434.221603 866.428653 90399.11 -0.2499 -0.00010851 0.59892 0.00026007 0.34903 0.00015156 434.221727916273 438.229030069745 20.596 0.54773 20.596 20.411 20.959 0 97 23 8 0 0 0 0.026711 2 6982 76.847 32.316 1 1.5135 1.716 0 96456000 41032000 55424000 11783 1914 4489 4609 18377;18378 18378 FSSYHVK 7 1 0 Unmodified _FSSYHVK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.222 2 434.221603 866.428653 88888.33 -0.2874 -0.0001248 1.0303 0.00044738 0.7429 0.00032258 434.22203505994 438.229040809469 20.335 0.40712 20.335 20.192 20.599 0 61 13 8 0 0 0 0.028931 2 6626 71.141 34.491 1 1.4082 1.6323 0 214950000 90972000 123980000 11784 1914 4489 4609 18379;18380 18380 FSSYHVK 7 1 0 Unmodified _FSSYHVK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 434.2215 2 434.221603 866.428653 90748.02 -0.4767 -0.00020699 0.5003 0.00021724 0.023603 1.0249E-05 434.221808382686 438.22878615099 22.002 0.51758 22.002 21.843 22.361 0 96 19 9 0 0 0 0.028486 1 6914 71.852 28.391 1 1.5525 1.2646 0 31507000 12451000 19056000 11785 1914 4489 4609 18381 18381 FSTPEQAAK 9 1 0 Unmodified _FSTPEQAAK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.7482 2 489.748182 977.481811 85529.9 0.24034 0.00011771 0.54336 0.00026611 0.7837 0.00038382 489.74838761536 493.755542581903 25.085 1.1719 25.085 24.752 25.923 0 137 62 7 0 0 0 0.0042933 2 10735 69.628 55.852 1 1.7081 1.9295 0 81962000 30089000 51873000 11786 865 4490 4610 18382;18383 18383 FSTPEQAAK 9 1 0 Unmodified _FSTPEQAAK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.7552 2 489.748182 977.481811 86217.21 0.19271 9.4378E-05 0.56839 0.00027837 0.7611 0.00037275 489.748171648419 493.755308642176 24.925 0.63625 24.925 24.716 25.353 0 115 25 9 0 0 0 1.8757E-05 2 10525 119.29 103.66 1 1.5757 1.7698 0 116890000 45368000 71522000 11787 865 4490 4610 18384;18385 18384 FSTPEQAAK 9 1 0 Unmodified _FSTPEQAAK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.7481 2 489.748182 977.481811 85727.26 0.22282 0.00010912 -0.017642 -8.6401E-06 0.20517 0.00010048 489.748193380995 493.755648444611 27.845 1.0189 27.845 27.615 28.633 0 139 47 8 0 0 0 0.0036023 2 10962 71.379 55.94 1 0.97006 0.77688 0 7293200 3724500 3568700 11788 865 4490 4610 18386;18387 18387 FSTPEQAAK 9 1 0 Unmodified _FSTPEQAAK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.755 2 489.748182 977.481811 86131.39 -0.081931 -4.0125E-05 0.4418 0.00021637 0.35987 0.00017624 489.748209798091 493.755593477896 27.989 0.79187 27.989 27.695 28.487 0 128 36 6 0 0 0 0.021536 2 10491 49.423 42.624 1 0.97749 0.80145 0 5336200 2655900 2680300 11789 865 4490 4610 18388;18389 18388 FSTPILDLFPTK 12 1 0 Unmodified _FSTPILDLFPTK_ 0 0 0 Q13129;Q59GL0 Q13129 Q13129 RLF Zinc finger protein Rlf MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.8932 2 689.884478 1377.7544 74780.57 1.0728 0.00074009 -0.062821 -4.3339E-05 1.0099 0.00069675 689.884389979955 693.891492910753 126.89 0.56282 126.89 126.6 127.17 7.6294E-06 151 34 6 0 0 0 0.00050599 2 82542 72.2 72.2 1 0.79554 0.79108 0 9596000 5254500 4341500 11790 1705 4491 4611 18390;18391 18391 FSTPILDLFPTK 12 1 0 Unmodified _FSTPILDLFPTK_ 0 0 0 Q13129;Q59GL0 Q13129 Q13129 RLF Zinc finger protein Rlf MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.8933 2 689.884478 1377.7544 74386.18 0.99004 0.00068301 0.19886 0.00013719 1.1889 0.0008202 689.884569875134 693.891681277723 126.45 0.54985 126.45 126.18 126.73 0 145 33 6 0 0 0 0.0001995 2 84265 78.653 78.653 1 0.76803 0.78167 0 12437000 7371200 5065700 11791 1705 4491 4611 18392;18393 18393 FSTSSLLLR 9 0 1 Unmodified _FSTSSLLLR_ 0 0 0 Q9Y5Q8;Q5T7U1;Q5T7U4 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.2998 2 512.295299 1022.57605 85883.13 0.26968 0.00013815 -0.15953 -8.1724E-05 0.11015 5.643E-05 512.29502367857 517.299364585932 101.35 0.34724 101.35 101.15 101.49 0 60 20 4 0 0 0 0.039901 1 56556 42.075 27.56 1 1.5378 1.3505 0 2507300 941620 1565700 11792 2149 4492 4612 18394 18394 FSVCVLGDQQHCDEAK 16 1 0 Unmodified _FSVCVLGDQQHCDEAK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.9487 3 631.613704 1891.81928 74001.51 0.49733 0.00031412 -0.27928 -0.00017639 0.21806 0.00013773 631.613858487926 634.285105070131 64.221 1.2493 64.221 63.776 65.026 0 944 111 12 0 0 0 1.9117E-18 2 36788 125.39 125.39 1 0.83703 0.97579 0 266500000 139290000 127200000 11793 1651 4493 4613 18395;18396 18395 FSVCVLGDQQHCDEAK 16 1 0 Unmodified _FSVCVLGDQQHCDEAK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.6139 3 631.613704 1891.81928 74312.45 0.44404 0.00028046 -0.41087 -0.00025951 0.03317 2.0951E-05 631.613839873547 634.285059946653 62.851 1.1868 62.851 62.426 63.613 0 821 102 12 0 0 0 1.25E-09 2 36798 96.208 96.208 1 0.87617 1.0312 0 410240000 221090000 189150000 11794 1651 4493 4613 18397;18398 18398 FSVCVLGDQQHCDEAK 16 1 0 Unmodified _FSVCVLGDQQHCDEAK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 946.9161 2 946.916917 1891.81928 63547.3 0.35487 0.00033604 -0.40443 -0.00038297 -0.049561 -4.693E-05 946.916687029062 950.923987828208 62.876 0.52061 62.876 62.588 63.109 0 167 47 8 0 0 0 1.2767E-06 1 36838 96.067 95.233 1 1.1268 1.1815 0 24089000 12197000 11892000 11795 1651 4493 4613 18399 18399 FSVCVLGDQQHCDEAK 16 1 0 Unmodified _FSVCVLGDQQHCDEAK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 951.4265 2 946.916917 1891.81928 NaN NaN NaN 0.49648 0.00047013 NaN NaN NaN NaN 62.758 0.20845 62.758 62.599 62.808 0 0 0 0 0.0027857 1 36780 58.754 52.782 1 NaN NaN 0 12045000 0 12045000 11796 1651 4493 4613 18400 18400 FSVCVLGDQQHCDEAK 16 1 0 Unmodified _FSVCVLGDQQHCDEAK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.9485 3 631.613704 1891.81928 74822.84 0.57965 0.00036611 -0.36224 -0.00022879 0.21741 0.00013732 631.614005398077 634.285086541835 73.707 1.342 73.707 73.384 74.726 0 648 96 13 0 0 0 1.8376E-13 2 39032 98.508 98.508 1 1.0602 0.90805 0 74206000 35720000 38486000 11797 1651 4493 4613 18401;18402 18402 FSVCVLGDQQHCDEAK 16 1 0 Unmodified _FSVCVLGDQQHCDEAK_ 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.2852 3 631.613704 1891.81928 73757.38 0.55599 0.00035117 -0.6281 -0.00039672 -0.072112 -4.5547E-05 631.613793585118 634.284939592393 74.069 1.1614 74.069 73.757 74.918 0 576 78 12 0 0 0 0.0062094 1 38524 28.627 28.627 1 1.0908 0.92594 0 70312000 33591000 36722000 11798 1651 4493 4613 18403 18403 FSVSPVVR 8 0 1 Unmodified _FSVSPVVR_ 0 0 0 P13639;Q8TA90;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.7621 2 445.758352 889.502152 87630.23 0.032278 1.4388E-05 -0.31851 -0.00014198 -0.28623 -0.00012759 445.757842431221 450.762317235996 63.461 0.97147 63.461 63.107 64.078 0 332 95 5 0 0 0 0.0090389 2 36321 76.035 59.071 1 3.6779 4.1503 0 100260000 23705000 76555000 11799 1478 4494 4614 18404;18405 18404 FSVSPVVR 8 0 1 Unmodified _FSVSPVVR_ 0 0 0 P13639;Q8TA90;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.7618 2 445.758352 889.502152 90556.2 0.034689 1.5463E-05 -0.85538 -0.00038129 -0.82069 -0.00036583 445.757712949888 450.762025985279 61.993 1.1151 61.993 61.683 62.798 3.8147E-06 428 103 8 0 0 0 0.0062953 1 36223 87.754 65.623 1 3.8001 4.3272 0 130430000 31262000 99171000 11800 1478 4494 4614 18406 18406 FSVSPVVR 8 0 1 Unmodified _FSVSPVVR_ 0 0 0 P13639;Q8TA90;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 450.7614 2 445.758352 889.502152 91825.76 -0.00032863 -1.4649E-07 -1.0411 -0.0004641 -1.0415 -0.00046424 445.757644330621 450.761969579788 73.059 0.94769 73.059 72.742 73.69 0 275 68 7 0 0 0 0.059544 1 37779 40.268 24.829 1 2.547 2.1131 0 5125900 1592400 3533500 11801 1478 4494 4614 18407 18407 FSWAQGTDTILADEMGLGK 19 1 0 Oxidation (M) _FSWAQGTDTILADEM(ox)GLGK_ FSWAQGTDTILADEM(1)GLGK FSWAQGTDTILADEM(80.96)GLGK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;K7EMY3;Q659F1;Q659D0;B3KRD4;Q12873 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1028.9907 2 1028.48823 2054.96191 59209.23 0.55587 0.00057171 0.20604 0.00021191 0.76192 0.00078362 1028.98974512323 1032.9972290869 113.08 0.53737 113.08 112.82 113.36 0 231 38 8 0 0 0 2.2302E-06 1 71440 80.96 80.96 1 0.85071 0.92042 0 35926000 19092000 16834000 11802 515;1701 4495 4615 18408 18408 373 FSWAQGTDTILADEMGLGK 19 1 0 Oxidation (M) _FSWAQGTDTILADEM(ox)GLGK_ FSWAQGTDTILADEM(1)GLGK FSWAQGTDTILADEM(76.73)GLGK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;K7EMY3;Q659F1;Q659D0;B3KRD4;Q12873 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1032.9972 2 1028.48823 2054.96191 59623.37 0.46094 0.00047407 0.11142 0.0001146 0.57236 0.00058867 1028.48809622517 1032.99668085607 112.54 0.4476 112.54 112.34 112.78 0 214 31 9 0 0 0 3.6684E-06 2 72745 76.728 76.728 1 0.83859 0.93122 0 49451000 25962000 23489000 11803 515;1701 4495 4615 18409;18410 18410 373 FSWAQGTDTILADEMGLGK 19 1 0 Oxidation (M) _FSWAQGTDTILADEM(ox)GLGK_ FSWAQGTDTILADEM(1)GLGK FSWAQGTDTILADEM(50.09)GLGK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;K7EMY3;Q659F1;Q659D0;B3KRD4;Q12873 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1028.9901 2 1028.48823 2054.96191 59114.2 0.53641 0.00055169 -0.63636 -0.00065449 -0.099946 -0.00010279 1028.48774128323 1032.99630306715 124.41 0.53637 124.41 124.15 124.68 -7.6294E-06 140 22 10 0 0 0 1.9905E-05 1 74441 50.088 50.088 1 1.2604 0.97647 0 13333000 5556000 7777300 11804 515;1701 4495 4615 18411 18411 373 FSWFAGEK 8 1 0 Unmodified _FSWFAGEK_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3;B4E2J2 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2418 2 486.23471 970.454868 NaN NaN NaN 0.16874 8.2045E-05 NaN NaN NaN NaN 79.992 0.84637 79.992 79.548 80.394 0 0 0 0 0.031868 1 48518 58.119 18.456 1 NaN NaN 0 22101000 0 22101000 11805 1503 4496 4616 18412 18412 FSYESELFPTFK 12 1 0 Unmodified _FSYESELFPTFK_ 0 0 0 Q9BVS4 Q9BVS4 Q9BVS4 RIOK2 Serine/threonine-protein kinase RIO2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.3728 2 747.8612 1493.70785 NaN NaN NaN 0.54407 0.00040689 NaN NaN NaN NaN 114.34 0.31059 114.34 114.11 114.42 0 0 0 0 0.052255 1 72499 41.54 33.008 1 NaN NaN 0 2413800 0 2413800 11806 2010 4497 4617 18413 18413 FSYESELFPTFK 12 1 0 Unmodified _FSYESELFPTFK_ 0 0 0 Q9BVS4 Q9BVS4 Q9BVS4 RIOK2 Serine/threonine-protein kinase RIO2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.3725 2 747.8612 1493.70785 NaN NaN NaN 1.3451 0.0010059 NaN NaN NaN NaN 113.7 0.28551 113.7 113.55 113.84 -7.6294E-06 0 0 0 0.0073363 2 73829 58.699 47.106 1 NaN NaN 0 2505200 0 2505200 11807 2010 4497 4617 18414;18415 18415 FSYLAVIEGAK 11 1 0 Unmodified _FSYLAVIEGAK_ 0 0 0 A8K3M3;P18031;B4DSN5 A8K3M3 A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.3298 2 599.329339 1196.64412 NaN NaN NaN -0.093904 -5.6279E-05 NaN NaN NaN NaN 107.89 0.55499 107.89 107.69 108.25 0 0 0 0 0.0021198 1 67313 77.662 59.223 1 NaN NaN 0 6079100 6079100 0 11808 724 4498 4618 18416 18416 FSYLAVIEGAK 11 1 0 Unmodified _FSYLAVIEGAK_ 0 0 0 A8K3M3;P18031;B4DSN5 A8K3M3 A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.3289 2 599.329339 1196.64412 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.26 1 107.26 106.76 107.76 0 0 0 0 1.7175E-05 1 68457 91.584 68.844 1 11809 724 4498 4618 18417 18417 FTAQGLPDLNHSQVYAVK 18 1 0 Unmodified _FTAQGLPDLNHSQVYAVK_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;A0A059XBJ1;A0A059XAL2;A0A059XAJ5 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.0184 3 663.346052 1987.01633 75343.54 0.70347 0.00046664 -0.027668 -1.8353E-05 0.6758 0.00044829 663.680402515435 666.017348985646 85.791 0.61993 85.791 85.441 86.061 0 218 52 8 0 0 0 0.010237 1 51433 22.985 22.985 1 2.4345 2.4336 0 18828000 6520800 12307000 11810 231 4499 4619 18418 18418 FTASIQR 7 0 1 Unmodified _FTASIQR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.7274 2 411.727052 821.439552 NaN NaN NaN 0.70091 0.00028858 NaN NaN NaN NaN 31.845 1.0929 31.845 31.295 32.388 0 0 0 0 0.043446 1 15462 61.561 42.755 1 NaN NaN 0 65873000 65873000 0 11811 2070 4500 4620 18419 18419 FTASIQR 7 0 1 Unmodified _FTASIQR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.7284 2 411.727052 821.439552 92050.35 0.085577 3.5234E-05 0.68926 0.00028379 0.77484 0.00031902 411.727159773257 416.731468578184 31.181 0.65897 31.181 30.847 31.506 0 236 56 8 0 0 0 0.028486 2 15255 71.852 53.187 1 0.84761 0.98339 0 323880000 174510000 149370000 11812 2070 4500 4620 18420;18421 18420 FTASIQR 7 0 1 Unmodified _FTASIQR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 416.7309 2 411.727052 821.439552 92800.47 -0.37565 -0.00015467 0.60124 0.00024755 0.22559 9.2882E-05 411.727068979286 416.731367879455 35.836 0.67986 35.836 35.588 36.268 0 226 55 8 0 0 0 0.032098 1 15926 66.087 51.067 1 1.788 1.509 0 29181000 10909000 18272000 11813 2070 4500 4620 18422 18422 FTCACPDQFK 10 1 0 Unmodified _FTCACPDQFK_ 0 0 0 Q14520;B7Z8Q5 Q14520 Q14520 HABP2 Hyaluronan-binding protein 2;Hyaluronan-binding protein 2 50 kDa heavy chain;Hyaluronan-binding protein 2 50 kDa heavy chain alternate form;Hyaluronan-binding protein 2 27 kDa light chain;Hyaluronan-binding protein 2 27 kDa light chain alternate form ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.27 2 637.270641 1272.52673 NaN NaN NaN -0.54828 -0.0003494 NaN NaN NaN NaN 46.086 0.64252 46.086 45.855 46.498 -3.8147E-06 0 0 0 4.1955E-05 2 24803 101.9 98.325 1 NaN NaN 0 20559000 20559000 0 11814 1733 4501 4621 18423;18424 18423 FTCACPDQFK 10 1 0 Unmodified _FTCACPDQFK_ 0 0 0 Q14520;B7Z8Q5 Q14520 Q14520 HABP2 Hyaluronan-binding protein 2;Hyaluronan-binding protein 2 50 kDa heavy chain;Hyaluronan-binding protein 2 50 kDa heavy chain alternate form;Hyaluronan-binding protein 2 27 kDa light chain;Hyaluronan-binding protein 2 27 kDa light chain alternate form ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.2711 2 637.270641 1272.52673 NaN NaN NaN -0.13617 -8.6778E-05 NaN NaN NaN NaN 53.83 0.51752 53.83 53.573 54.09 0 0 0 0 0.014145 1 26150 59.052 54.269 1 NaN NaN 0 2464600 2464600 0 11815 1733 4501 4621 18425 18425 FTCSECASGIHSCFVCK 17 1 0 Unmodified _FTCSECASGIHSCFVCK_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.9535 3 683.947701 2048.82127 72341.91 0.45154 0.00030883 -0.78505 -0.00053694 -0.33351 -0.0002281 684.281744615536 686.619247410826 62.247 0.46352 62.247 62.056 62.519 3.8147E-06 252 37 10 0 0 0 5.4161E-05 2 31958 52.172 52.172 1 1.4234 1.1382 0 7060000 2673600 4386400 11816 1435 4502 4622 18426;18427 18427 FTCSECASGIHSCFVCK 17 1 0 Unmodified _FTCSECASGIHSCFVCK_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.948 3 683.947701 2048.82127 73262.4 0.38419 0.00026276 -0.72157 -0.00049352 -0.33738 -0.00023075 684.281872838047 686.953347034464 62.762 0.36103 62.762 62.58 62.941 3.8147E-06 147 24 10 0 0 0 0.0041999 1 31558 29.422 29.335 1 1.3066 1.0657 0 5856200 2406200 3450000 11817 1435 4502 4622 18428 18428 FTDDTFDPELAATIGVDFK 19 1 0 Unmodified _FTDDTFDPELAATIGVDFK_ 0 0 0 Q9NP72;B7Z4P9;Q9BZT2;H0Y6T8 Q9NP72 Q9NP72 RAB18 Ras-related protein Rab-18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.5093 2 1051.50186 2100.98917 NaN NaN NaN -0.55123 -0.00057962 NaN NaN NaN NaN 126.78 0.41572 126.78 126.63 127.05 0 0 0 0 3.7847E-17 1 82532 106.58 96.029 1 NaN NaN 0 3523200 0 3523200 11818 2055 4503 4623 18429 18429 FTDDTFDPELAATIGVDFK 19 1 0 Unmodified _FTDDTFDPELAATIGVDFK_ 0 0 0 Q9NP72;B7Z4P9;Q9BZT2;H0Y6T8 Q9NP72 Q9NP72 RAB18 Ras-related protein Rab-18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1055.5093 2 1051.50186 2100.98917 NaN NaN NaN 0.42353 0.00044534 NaN NaN NaN NaN 126.54 0.41759 126.54 126.33 126.75 0 0 0 0 5.6338E-13 1 84357 98.942 81.575 1 NaN NaN 0 5135900 0 5135900 11819 2055 4503 4623 18430 18430 FTDDYQLFEELGK 13 1 0 Unmodified _FTDDYQLFEELGK_ 0 0 0 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;B3KY86;B4DVQ3 Q5SWX3 Q5SWX3 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.8849 2 802.877578 1603.7406 71643.36 1.055 0.00084705 -0.4627 -0.00037149 0.59231 0.00047555 803.37852010886 806.8843378777 112.67 0.50719 112.67 112.44 112.95 0 150 37 6 0 0 0 1.6448E-05 2 71219 99.522 99.522 1 1.3868 1.3865 0 7745900 4233500 3512500 11820 475 4504 4624 18431;18432 18431 FTDDYQLFEELGK 13 1 0 Unmodified _FTDDYQLFEELGK_ 0 0 0 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;B3KY86;B4DVQ3 Q5SWX3 Q5SWX3 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.8864 2 802.877578 1603.7406 70645.13 1.0078 0.00080916 -0.47012 -0.00037745 0.5377 0.00043171 802.877289294496 806.884369145267 112.17 0.4328 112.17 111.9 112.34 0 119 33 6 0 0 0 7.5482E-05 3 72445 94.616 94.616 1 1.3725 1.3932 0 9110600 3864000 5246700 11821 475 4504 4624 18433;18434;18435 18434 FTDDYQLFEELGK 13 1 0 Unmodified _FTDDYQLFEELGK_ 0 0 0 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;B3KY86;B4DVQ3 Q5SWX3 Q5SWX3 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.8857 2 802.877578 1603.7406 68339.71 0.72933 0.00058556 0.77486 0.00062212 1.5042 0.0012077 802.878084999491 807.387527587692 123.75 0.42142 123.75 123.51 123.93 -7.6294E-06 64 16 5 0 0 0 0.0024841 1 73080 53.569 53.569 1 1.215 0.95793 0 2295400 875570 1419800 11822 475 4504 4624 18436 18436 FTDILVR 7 0 1 Unmodified _FTDILVR_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 432.2528 2 432.252903 862.491253 93708.96 -0.23272 -0.0001006 -0.0080232 -3.468E-06 -0.24075 -0.00010406 432.253023832036 437.256590051829 83.447 0.44826 83.447 83.111 83.559 7.6294E-06 65 27 7 0 0 0 0.026166 1 45493 88.35 48.588 1 1.4244 1.2113 0 9095900 4195300 4900600 11823 1379 4505 4625 18437 18437 FTDILVR 7 0 1 Unmodified _FTDILVR_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 432.2528 2 432.252903 862.491253 96071.7 -0.024194 -1.0458E-05 -0.11921 -5.153E-05 -0.14341 -6.1988E-05 432.252685839718 437.25664960553 83.566 0.44127 83.566 83.235 83.676 0 51 23 5 0 0 0 0.012971 2 44762 104.11 48.588 1 1.0868 0.89336 0 8609600 4074400 4535300 11824 1379 4505 4625 18438;18439 18438 FTEDSLLR 8 0 1 Unmodified _FTEDSLLR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.7606 2 490.756007 979.497461 87424.76 0.1824 8.9515E-05 0.32184 0.00015795 0.50424 0.00024746 490.755967107311 495.760134160802 66.094 1.0454 66.094 65.602 66.647 0 281 92 5 0 0 0 0.010824 2 38078 71.342 28.342 1 0.76062 0.78334 0 19733000 12042000 7690600 11825 222 4506 4626 18440;18441 18441 FTEDSLLR 8 0 1 Unmodified _FTEDSLLR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.7565 2 490.756007 979.497461 NaN NaN NaN 0.1488 7.3022E-05 NaN NaN NaN NaN 64.914 0.83421 64.914 64.429 65.264 0 0 0 0 0.052149 1 38149 49.097 15.739 1 NaN NaN 0 15038000 15038000 0 11826 222 4506 4626 18442 18442 FTEEIPLK 8 1 0 Unmodified _FTEEIPLK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.7784 2 488.771126 975.527698 NaN NaN NaN -0.15063 -7.3622E-05 NaN NaN NaN NaN 72.189 0.61839 72.189 72.006 72.624 0 0 0 0 0.0076936 1 42218 81.89 41.318 1 NaN NaN 0 8765500 0 8765500 11827 1364 4507 4627 18443 18443 FTEFDAR 7 0 1 Unmodified _FTEFDAR_ 0 0 0 O14646;B3KT33;A0A024RC75;O14647 O14646;A0A024RC75 O14646 CHD1;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.213 2 443.208692 884.402832 90943.67 0.38106 0.00016889 0.12958 5.7433E-05 0.51065 0.00022632 443.208627969709 448.212726170452 40.048 0.43232 40.048 39.86 40.292 3.8147E-06 145 37 6 0 0 0 0.020094 2 21267 94.407 27.414 1 0.76255 0.88296 0 57286000 32853000 24433000 11828 1366;354 4508 4628 18444;18445 18445 FTEYETQVK 9 1 0 Unmodified _FTEYETQVK_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148;A0A087WXQ5;A0A087WV68;B1AKP7;G3V162;A0A087X260;A0A087WYY0;A0A087WW61;A0A087WX67;A0A087WXV3;K7EJM5;A0A0A0N0N3;A0A0A0N0M3;K7EN94 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.7887 2 572.779679 1143.5448 78572.55 0.77719 0.00044516 1.2143 0.00069555 1.9915 0.0011407 572.780244684108 576.787271669441 37.378 0.80611 37.378 36.993 37.799 0 265 68 7 0 0 0 0.0036023 1 18889 71.379 36.555 1 1.6316 1.8291 0 65187000 25954000 39232000 11829 153 4509 4629 18446 18446 FTEYETQVK 9 1 0 Unmodified _FTEYETQVK_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148;A0A087WXQ5;A0A087WV68;B1AKP7;G3V162;A0A087X260;A0A087WYY0;A0A087WW61;A0A087WX67;A0A087WXV3;K7EJM5;A0A0A0N0N3;A0A0A0N0M3;K7EN94 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.7877 2 572.779679 1143.5448 NaN NaN NaN 0.96832 0.00055463 NaN NaN NaN NaN 36.448 0.80794 36.448 36.092 36.9 3.8147E-06 0 0 0 0.016434 2 18867 61.679 31.067 1 NaN NaN 0 68949000 0 68949000 11830 153 4509 4629 18447;18448 18448 FTEYETQVK 9 1 0 Unmodified _FTEYETQVK_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148;A0A087WXQ5;A0A087WV68;B1AKP7;G3V162;A0A087X260;A0A087WYY0;A0A087WW61;A0A087WX67;A0A087WXV3;K7EJM5;A0A0A0N0N3;A0A0A0N0M3;K7EN94 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.7869 2 572.779679 1143.5448 NaN NaN NaN 1.2351 0.00070745 NaN NaN NaN NaN 43.032 0.89237 43.032 42.694 43.586 0 0 0 0 0.048213 1 20208 47.603 26.303 1 NaN NaN 0 2804500 0 2804500 11831 153 4509 4629 18449 18449 FTEYETQVK 9 1 0 Unmodified _FTEYETQVK_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148;A0A087WXQ5;A0A087WV68;B1AKP7;G3V162;A0A087X260;A0A087WYY0;A0A087WW61;A0A087WX67;A0A087WXV3;K7EJM5;A0A0A0N0N3;A0A0A0N0M3;K7EN94 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.7803 2 572.779679 1143.5448 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.995 1 42.995 42.495 43.495 3.8147E-06 0 0 0 0.044691 1 20198 48.283 30.897 1 11832 153 4509 4629 18450 18450 FTEYETQVK 9 1 0 Unmodified _FTEYETQVK_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148;A0A087WXQ5;A0A087WV68;B1AKP7;G3V162;A0A087X260;A0A087WYY0;A0A087WW61;A0A087WX67;A0A087WXV3;K7EJM5;A0A0A0N0N3;A0A0A0N0M3;K7EN94 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.7869 2 572.779679 1143.5448 NaN NaN NaN 1.2346 0.00070717 NaN NaN NaN NaN 43.178 0.9323 43.178 42.772 43.704 0 0 0 0 0.011998 1 19726 65.156 29.276 1 NaN NaN 0 2513300 0 2513300 11833 153 4509 4629 18451 18451 FTEYSMTSSVMR 12 0 1 2 Oxidation (M) _FTEYSM(ox)TSSVM(ox)R_ FTEYSM(1)TSSVM(1)R FTEYSM(57.53)TSSVM(57.53)R 0 2 0 Q96GA3;A0A075B6Q4 Q96GA3 Q96GA3 LTV1 Protein LTV1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.8195 2 735.815609 1469.61667 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.445 1 34.445 33.945 34.945 0 0 0 0 0.0075132 1 17237 57.532 51.148 1 11834 1966 4510 4630 18452 18452 1812;1813 FTFGLDWVPK 10 1 0 Unmodified _FTFGLDWVPK_ 0 0 0 A0A140VJZ1;P45974;H7C5J3;A0A0A6YZ17;Q92995 A0A140VJZ1 A0A140VJZ1 USP5;USP13 Ubiquitin carboxyl-terminal hydrolase 5;Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 13 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.3264 2 605.318774 1208.623 NaN NaN NaN -0.071293 -4.3155E-05 NaN NaN NaN NaN 120.63 0.42345 120.63 120.45 120.88 0 0 0 0 0.0033711 1 79719 76.827 56.306 1 NaN NaN 0 4167400 0 4167400 11835 613 4511 4631 18453 18453 FTFLYVGDQLHLNPQVAK 18 1 0 Unmodified _FTFLYVGDQLHLNPQVAK_ 0 0 0 O96028;Q05CW4;D6R9V2 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.0458 3 697.37383 2089.09966 73478.96 0.81156 0.00056596 -0.24824 -0.00017312 0.56332 0.00039284 697.373805546575 700.379479607217 114.79 0.60686 114.79 114.51 115.12 -7.6294E-06 197 39 7 0 0 0 1.907E-06 1 72826 73.498 73.498 1 0.82579 0.83914 0 13763000 6909800 6853100 11836 1435 4512 4632 18454 18454 FTFLYVGDQLHLNPQVAK 18 1 0 Unmodified _FTFLYVGDQLHLNPQVAK_ 0 0 0 O96028;Q05CW4;D6R9V2 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.3801 3 697.37383 2089.09966 73454.81 0.82885 0.00057802 -0.28458 -0.00019846 0.54428 0.00037956 697.707583396305 700.379628787593 114.15 0.57294 114.15 113.86 114.44 0 233 41 8 0 0 0 4.9171E-06 2 74058 71.594 71.594 1 0.89026 0.92578 0 18966000 9717000 9248700 11837 1435 4512 4632 18455;18456 18456 FTFLYVGDQLHLNPQVAK 18 1 0 Unmodified _FTFLYVGDQLHLNPQVAK_ 0 0 0 O96028;Q05CW4;D6R9V2 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 700.046 3 697.37383 2089.09966 71960.27 0.7599 0.00052993 -0.5113 -0.00035657 0.2486 0.00017336 697.707467817579 700.045123679878 125.57 0.59209 125.57 125.35 125.94 0 151 24 9 0 0 0 2.4864E-06 2 75360 63.918 63.918 1 1.6263 1.2701 0 16091000 5764100 10327000 11838 1435 4512 4632 18457;18458 18457 FTFLYVGDQLHLNPQVAK 18 1 0 Unmodified _FTFLYVGDQLHLNPQVAK_ 0 0 0 O96028;Q05CW4;D6R9V2 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.3805 3 697.37383 2089.09966 72179.34 0.71511 0.0004987 -0.20761 -0.00014478 0.5075 0.00035392 697.707765260867 700.379778149016 125.39 0.67493 125.39 125.2 125.88 0 147 30 9 0 0 0 1.907E-06 2 74310 65.949 65.949 1 1.7989 1.4453 0 15911000 5828100 10083000 11839 1435 4512 4632 18459;18460 18459 FTFYDGPPFATGLPHYGHILAGTIK 25 1 0 Unmodified _FTFYDGPPFATGLPHYGHILAGTIK_ 0 0 0 Q59G75;P41252;A0A0A0MSX9;Q7Z3U5;B4DVX2;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.8561 4 680.852241 2719.37986 72397.95 1.086 0.00073938 -0.33269 -0.00022651 0.75327 0.00051287 681.353579187227 683.106109207067 131.15 0.51541 131.15 130.97 131.48 0 165 34 8 0 0 0 1.1748E-08 1 85524 51.857 51.857 1 1.6744 1.7637 0 16411000 4627600 11783000 11840 1561 4513 4633 18461 18461 FTFYDGPPFATGLPHYGHILAGTIK 25 1 0 Unmodified _FTFYDGPPFATGLPHYGHILAGTIK_ 0 0 0 Q59G75;P41252;A0A0A0MSX9;Q7Z3U5;B4DVX2;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.1069 4 680.852241 2719.37986 73563.81 0.89058 0.00060636 -0.054915 -3.7389E-05 0.83567 0.00056897 680.851906262131 683.106522354931 131.09 0.48441 131.09 130.8 131.29 0 185 36 8 0 0 0 1.8298E-05 1 87646 42.454 42.454 1 2.2549 2.2508 0 14875000 6567100 8308100 11841 1561 4513 4633 18462 18462 FTFYDGPPFATGLPHYGHILAGTIK 25 1 0 Unmodified _FTFYDGPPFATGLPHYGHILAGTIK_ 0 0 0 Q59G75;P41252;A0A0A0MSX9;Q7Z3U5;B4DVX2;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.1031 4 680.852241 2719.37986 72964.7 0.8307 0.00056558 -0.20703 -0.00014096 0.62367 0.00042463 681.102864916087 683.106216412331 128.99 0.7429 128.99 128.78 129.52 0 139 34 6 0 0 0 0.0072339 1 77998 24.153 24.153 1 0.73559 0.57277 0 3347600 1950500 1397100 11842 1561 4513 4633 18463 18463 FTFYDGPPFATGLPHYGHILAGTIK 25 1 0 Unmodified _FTFYDGPPFATGLPHYGHILAGTIK_ 0 0 0 Q59G75;P41252;A0A0A0MSX9;Q7Z3U5;B4DVX2;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.8527 4 680.852241 2719.37986 NaN NaN NaN 0.15643 0.00010651 NaN NaN NaN NaN 128.77 0.70695 128.77 128.57 129.27 0 0 0 0 0.045419 1 76983 18.095 15.371 1 NaN NaN 0 3753900 3753900 0 11843 1561 4513 4633 18464 18464 FTGNQIQNR 9 0 1 Unmodified _FTGNQIQNR_ 0 0 0 A0A024R784;O15164;B4DYZ9;Q6ZSA6 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.28 2 539.275429 1076.53631 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.165 1 21.165 20.665 21.665 0 0 0 0 0.0005967 1 7500 101.64 70.354 1 11844 217 4514 4634 18465 18465 FTIENVTR 8 0 1 Unmodified _FTIENVTR_ 0 0 0 B2R823;Q9NRX1 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.766 2 490.263999 978.513445 87930.43 0.6265 0.00030715 0.27708 0.00013584 0.90358 0.00044299 490.264005269967 495.268090862744 60.366 0.65856 60.366 59.948 60.606 0 225 59 6 0 0 0 0.021237 2 34359 57.96 24.163 1 1.0986 1.2174 0 64355000 34123000 30232000 11845 858 4515 4635 18466;18467 18467 FTIENVTR 8 0 1 Unmodified _FTIENVTR_ 0 0 0 B2R823;Q9NRX1 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2644 2 490.263999 978.513445 87121.8 0.41589 0.0002039 0.19485 9.553E-05 0.61074 0.00029943 490.263887894695 495.268158268546 59.135 0.49644 59.135 58.891 59.387 3.8147E-06 203 45 6 0 0 0 0.003342 2 34337 97.093 55.441 1 1.0473 1.2017 0 80551000 38242000 42309000 11846 858 4515 4635 18468;18469 18469 FTIENVTR 8 0 1 Unmodified _FTIENVTR_ 0 0 0 B2R823;Q9NRX1 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 490.2642 2 490.263999 978.513445 86354.12 -0.0024109 -1.182E-06 0.49711 0.00024371 0.4947 0.00024253 490.264090962874 495.26829397697 70.043 0.54162 70.043 69.795 70.337 0 186 45 6 0 0 0 0.029143 1 36686 52.786 24.568 1 1.2073 0.99038 0 12333000 5647400 6685900 11847 858 4515 4635 18470 18470 FTIENVTR 8 0 1 Unmodified _FTIENVTR_ 0 0 0 B2R823;Q9NRX1 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 490.264 2 490.263999 978.513445 86063.89 -0.037678 -1.8472E-05 0.6321 0.00030989 0.59442 0.00029142 490.264175025345 495.268333930475 70.471 0.51131 70.471 70.266 70.777 0 187 43 6 0 0 0 0.04634 2 36190 45.081 20.927 1 1.1621 0.93947 0 10676000 4634700 6041700 11848 858 4515 4635 18471;18472 18472 FTITPPTAQVVGVLK 15 1 0 Unmodified _FTITPPTAQVVGVLK_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.9714 2 785.963791 1569.91303 69389.27 0.85377 0.00067104 -0.13047 -0.00010254 0.72331 0.00056849 785.963732664884 789.970777481725 115.37 0.51644 115.37 115.12 115.64 0 164 32 8 0 0 0 0.00014645 1 75162 79.659 79.659 1 1.3534 1.499 0 46327000 19678000 26649000 11849 43 4516 4636 18473 18473 FTLAGHTK 8 1 0 Unmodified _FTLAGHTK_ 0 0 0 P61964;V9GYQ5;V9GZ59 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.7495 2 437.742702 873.470852 92385.68 -0.2216 -9.7004E-05 -0.048352 -2.1166E-05 -0.26995 -0.00011817 437.742625661748 441.749654721351 24.11 0.46194 24.11 23.873 24.335 0 54 17 6 0 0 0 0.0014971 2 9935 108.46 108.46 1 0.893 0.98259 0 42617000 21145000 21473000 11850 1630 4517 4637 18474;18475 18474 FTLAGHTK 8 1 0 Unmodified _FTLAGHTK_ 0 0 0 P61964;V9GYQ5;V9GZ59 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 437.7429 2 437.742702 873.470852 93829.7 -0.16669 -7.2969E-05 0.54217 0.00023733 0.37548 0.00016436 437.742931398082 441.749899779642 26.687 0.4212 26.687 26.505 26.926 0 108 19 8 0 0 0 0.015121 2 10168 61.962 58.109 1 1.2176 0.96438 0 6300700 2813700 3487000 11851 1630 4517 4637 18476;18477 18477 FTLAGHTK 8 1 0 Unmodified _FTLAGHTK_ 0 0 0 P61964;V9GYQ5;V9GZ59 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 441.7496 2 437.742702 873.470852 91385.89 -0.16185 -7.085E-05 0.46844 0.00020505 0.30658 0.00013421 437.742855423237 441.749864857094 26.542 0.498 26.542 26.324 26.822 0 102 23 7 0 0 0 0.026353 1 9523 54.611 51.219 1 1.5434 1.2592 0 6077000 2304400 3772600 11852 1630 4517 4637 18478 18478 FTLDCTHPVEDGIMDAANFEQFLQER 26 0 1 Oxidation (M) _FTLDCTHPVEDGIM(ox)DAANFEQFLQER_ FTLDCTHPVEDGIM(1)DAANFEQFLQER FTLDCTHPVEDGIM(71.09)DAANFEQFLQER 0 1 0 Q7Z4W8;P35268 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1037.4702 3 1033.79894 3098.37499 60056.18 0.76021 0.0007859 -0.58385 -0.00060359 0.17636 0.00018232 1034.46704675095 1037.46881568119 124.67 0.73668 124.67 124.4 125.14 0 419 50 12 0 0 0 5.7272E-13 2 81019 71.091 71.091 1 1.0676 1.1078 0 37762000 17492000 20270000 11853 1543 4518 4638 18479;18480 18479 1301 FTLDCTHPVEDGIMDAANFEQFLQER 26 0 1 Oxidation (M) _FTLDCTHPVEDGIM(ox)DAANFEQFLQER_ FTLDCTHPVEDGIM(1)DAANFEQFLQER FTLDCTHPVEDGIM(72.3)DAANFEQFLQER 0 1 0 Q7Z4W8;P35268 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1034.1348 3 1033.79894 3098.37499 59736 0.73141 0.00075613 -0.23521 -0.00024316 0.49619 0.00051297 1034.13313028878 1037.46928983497 124.27 0.78731 124.27 124.03 124.82 0 448 50 14 0 0 0 4.2622E-13 2 82728 72.302 72.302 1 1.059 1.2197 0 73652000 35750000 37902000 11854 1543 4518 4638 18481;18482 18482 1301 FTLDCTHPVEDGIMDAANFEQFLQER 26 0 1 Oxidation (M) _FTLDCTHPVEDGIM(ox)DAANFEQFLQER_ FTLDCTHPVEDGIM(1)DAANFEQFLQER FTLDCTHPVEDGIM(84.95)DAANFEQFLQER 0 1 0 Q7Z4W8;P35268 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1034.1345 3 1033.79894 3098.37499 59891.77 0.92598 0.00095728 0.096852 0.00010013 1.0228 0.0010574 1034.13372678508 1037.46972679442 134.4 0.19353 134.4 134.28 134.48 0 86 8 14 0 0 0 2.4486E-14 2 82048 84.947 84.947 1 0.78562 0.67705 0 66508000 40182000 26326000 11855 1543 4518 4638 18483;18484 18484 1301 FTLDCTHPVEDGIMDAANFEQFLQER 26 0 1 Oxidation (M) _FTLDCTHPVEDGIM(ox)DAANFEQFLQER_ FTLDCTHPVEDGIM(1)DAANFEQFLQER FTLDCTHPVEDGIM(105.03)DAANFEQFLQER 0 1 0 Q7Z4W8;P35268 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1034.1353 3 1033.79894 3098.37499 59295.52 0.62357 0.00064464 -0.43275 -0.00044738 0.19082 0.00019727 1034.46724030077 1037.80325210467 134.37 0.20311 134.37 134.24 134.44 0 91 8 15 0 0 0 1.3344E-21 2 81071 105.03 105.03 1 0.77239 0.67415 0 84154000 48292000 35862000 11856 1543 4518 4638 18485;18486 18486 1301 FTLNPNPTGVQNPHIER 17 0 1 Unmodified _FTLNPNPTGVQNPHIER_ 0 0 0 B4DH44;P45985 B4DH44 B4DH44 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.0056 3 645.334146 1932.98061 NaN NaN NaN 0.66558 0.00042952 NaN NaN NaN NaN 71.692 0.18002 71.692 71.546 71.726 0 0 0 0 0.011688 1 42943 34.87 26.511 1 NaN NaN 0 6212100 0 6212100 11857 973 4519 4639 18487 18487 FTLSGGNWNTVSETAK 16 1 0 Unmodified _FTLSGGNWNTVSETAK_ 0 0 0 E9PGT3;Q15418 E9PGT3 E9PGT3 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 860.4254 2 856.417933 1710.82131 NaN NaN NaN 1.4533 0.0012446 NaN NaN NaN NaN 86.915 0.19715 86.915 86.763 86.96 0 0 0 0 0.013418 1 52349 44.299 30.53 1 NaN NaN 0 4434300 0 4434300 11858 1235 4520 4640 18488 18488 FTLSSSR 7 0 1 Unmodified _FTLSSSR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.2113 2 399.211235 796.407917 93301.91 0.30941 0.00012352 1.433 0.00057208 1.7424 0.0006956 399.211413286121 404.215121522387 32.28 0.92822 32.28 31.771 32.699 0 298 85 6 0 0 0 0.014014 1 15902 101.21 62.19 1 0.68787 0.73188 0 43104000 25110000 17993000 11859 716 4521 4641 18489 18489 FTLTQSEADADILFNFSHFK 20 1 0 Unmodified _FTLTQSEADADILFNFSHFK_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.3846 3 777.714581 2330.12191 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.41 1 125.41 124.91 125.91 -7.6294E-06 0 0 0 0.011383 1 81525 49.528 40.927 1 11860 161 4522 4642 18490 18490 FTLTQSEADADILFNFSHFK 20 1 0 Unmodified _FTLTQSEADADILFNFSHFK_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.3879 3 777.714581 2330.12191 69743.35 1.172 0.00091145 -0.002727 -2.1208E-06 1.1692 0.00090933 778.04882861405 780.720093235902 124.93 0.6918 124.93 124.62 125.31 0 141 48 4 0 0 0 0.0063713 1 83109 33.707 33.707 1 1.5325 1.5461 0 7907500 2808100 5099400 11861 161 4522 4642 18491 18491 FTLWWSPTINR 11 0 1 Unmodified _FTLWWSPTINR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.8775 2 710.872237 1419.72992 71708.09 0.92455 0.00065724 0.47314 0.00033635 1.3977 0.00099358 711.374238725698 715.875916387489 120.04 0.57867 120.04 119.82 120.4 0 205 39 7 0 0 0 0.00052901 2 77267 74.464 73.985 1 0.90818 0.93151 0 14379000 8140300 6238700 11862 1854 4523 4643 18492;18493 18493 FTLWWSPTINR 11 0 1 Unmodified _FTLWWSPTINR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.8766 2 710.872237 1419.72992 71421.18 0.82522 0.00058663 0.62377 0.00044342 1.449 0.00103 710.872710863376 715.875784289324 119.48 0.66925 119.48 119.21 119.88 7.6294E-06 218 48 7 0 0 0 0.0006898 3 78684 73.233 67.001 1 0.84555 0.84821 0 17549000 9490400 8058900 11863 1854 4523 4643 18494;18495;18496 18495 FTMDLDSDEDFSDFDEK 17 1 0 Oxidation (M) _FTM(ox)DLDSDEDFSDFDEK_ FTM(1)DLDSDEDFSDFDEK FTM(136.3)DLDSDEDFSDFDEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1040.9103 2 1036.40168 2070.78881 59676.44 0.6021 0.00062402 -0.35828 -0.00037132 0.24383 0.0002527 1036.40140670185 1040.40850456841 92.815 0.83817 92.815 92.406 93.245 0 449 74 8 0 0 0 5.4373E-19 2 56137 136.3 136.3 1 1.2474 1.3411 0 38832000 18540000 20292000 11864 1471 4524 4644 18497;18498 18498 1198 FTMDLDSDEDFSDFDEK 17 1 0 Oxidation (M) _FTM(ox)DLDSDEDFSDFDEK_ FTM(1)DLDSDEDFSDFDEK FTM(114.56)DLDSDEDFSDFDEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1040.4082 2 1036.40168 2070.78881 60073.13 0.56954 0.00059028 -0.32858 -0.00034054 0.24097 0.00024974 1036.90284335588 1040.40855935543 92.259 0.88682 92.259 91.934 92.821 0 412 74 9 0 0 0 8.3638E-13 2 57009 114.56 114.56 1 1.2085 1.3267 0 41517000 16679000 24838000 11865 1471 4524 4644 18499;18500 18500 1198 FTNTQITEHYSTCIK 15 1 0 Unmodified _FTNTQITEHYSTCIK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.6326 3 614.961209 1841.8618 76396.05 0.24998 0.00015373 -0.05818 -3.5779E-05 0.1918 0.00011795 615.295494854345 617.632564919385 54.893 0.58902 54.893 54.643 55.232 0 334 57 8 0 0 0 3.1998E-23 3 30813 127.88 127.88 1 0.7579 0.85379 0 74646000 45855000 28791000 11866 740 4525 4645 18501;18502;18503 18502 FTNTQITEHYSTCIK 15 1 0 Unmodified _FTNTQITEHYSTCIK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 926.4473 2 921.938176 1841.8618 64140.16 0.3049 0.0002811 -0.081906 -7.5513E-05 0.22299 0.00020558 921.93743029427 925.945613885653 54.905 0.27538 54.905 54.734 55.01 -3.8147E-06 86 25 5 0 0 0 2.9265E-15 2 30858 131.13 131.13 1 0.75587 0.78324 0 29338000 18139000 11199000 11867 740 4525 4645 18504;18505 18505 FTNTQITEHYSTCIK 15 1 0 Unmodified _FTNTQITEHYSTCIK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.6323 3 614.961209 1841.8618 75413.51 0.47763 0.00029372 0.23155 0.00014239 0.70918 0.00043612 614.96125786988 617.632629494801 53.67 0.59209 53.67 53.429 54.021 0 339 57 8 0 0 0 1.6032E-15 2 30636 118.19 118.19 1 0.84517 0.94467 0 99230000 56783000 42447000 11868 740 4525 4645 18506;18507 18507 FTNTQITEHYSTCIK 15 1 0 Unmodified _FTNTQITEHYSTCIK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.4465 2 921.938176 1841.8618 65831.45 0.65101 0.00060019 0.22149 0.0002042 0.8725 0.00080439 921.938111083308 926.446692881633 53.742 0.34295 53.742 53.527 53.87 -3.8147E-06 111 32 5 0 0 0 1.457E-30 3 30666 157.56 157.56 1 0.77723 0.77584 0 14639000 8156100 6483300 11869 740 4525 4645 18508;18509;18510 18510 FTNTQITEHYSTCIK 15 1 0 Unmodified _FTNTQITEHYSTCIK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.6334 3 614.961209 1841.8618 75372.25 0.42441 0.00026099 -0.17715 -0.00010894 0.24726 0.00015205 614.961056275769 617.632592976142 64.879 1.1086 64.879 64.59 65.698 0 500 82 10 0 0 0 0.0013303 3 33349 38.093 38.093 1 1.6706 1.37 0 36732000 13572000 23160000 11870 740 4525 4645 18511;18512;18513 18511 FTNTQITEHYSTCIK 15 1 0 Unmodified _FTNTQITEHYSTCIK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.6334 3 614.961209 1841.8618 75724.88 0.28872 0.00017755 0.07753 4.7678E-05 0.36625 0.00022523 615.295594647052 617.632726957157 65.379 0.97366 65.379 65.135 66.109 0 436 73 10 0 0 0 6.7998E-05 2 32918 53.981 53.981 1 1.7195 1.4267 0 35892000 13417000 22476000 11871 740 4525 4645 18514;18515 18514 FTPGTFTNQIQAAFR 15 0 1 Unmodified _FTPGTFTNQIQAAFR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;Q96RS2 C9J9K3 C9J9K3 RPSA 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.9341 2 849.933554 1697.85255 65913.79 1.1152 0.00094789 -0.053263 -4.527E-05 1.062 0.00090262 850.434572484217 854.937673468832 111.43 0.72887 111.43 111.08 111.81 0 354 52 9 0 0 0 4.3288E-58 2 69992 192.5 182.84 1 1.6699 1.9676 0 239330000 88484000 150850000 11872 119 4526 4646 18516;18517 18517 FTPGTFTNQIQAAFR 15 0 1 Unmodified _FTPGTFTNQIQAAFR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;Q96RS2 C9J9K3 C9J9K3 RPSA 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.9338 2 849.933554 1697.85255 66046.22 0.69395 0.00058981 0.14846 0.00012618 0.84241 0.00071599 850.434994819422 854.937785511211 110.82 0.79281 110.82 110.44 111.23 0 399 59 10 0 0 0 1.489E-39 2 71248 175.15 175.15 1 1.6386 1.8904 0 237080000 89780000 147300000 11873 119 4526 4646 18518;18519 18519 FTPGTFTNQIQAAFR 15 0 1 Unmodified _FTPGTFTNQIQAAFR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;Q96RS2 C9J9K3 C9J9K3 RPSA 40S ribosomal protein SA MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 854.9391 2 849.933554 1697.85255 65300.57 0.95932 0.00081536 0.17272 0.0001468 1.132 0.00096216 849.933383464325 854.937732299422 122.76 0.77143 122.76 122.53 123.3 0 199 36 9 0 0 0 9.6748E-05 3 73217 94.767 92.254 1 1.5449 1.3172 0 36753000 14800000 21954000 11874 119 4526 4646 18520;18521;18522 18521 FTPGTFTNQIQAAFR 15 0 1 Unmodified _FTPGTFTNQIQAAFR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;Q96RS2 C9J9K3 C9J9K3 RPSA 40S ribosomal protein SA MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.9391 2 849.933554 1697.85255 64686.86 0.95965 0.00081564 0.90883 0.00077245 1.8685 0.0015881 849.933536222733 854.937942254779 122.58 0.68431 122.58 122.34 123.03 0 242 33 10 0 0 0 0.00060136 3 72137 67.153 67.153 1 1.5333 1.3375 0 30292000 12192000 18100000 11875 119 4526 4646 18523;18524;18525 18524 FTPGTFTNQIQAAFREPR 18 0 2 Unmodified _FTPGTFTNQIQAAFREPR_ 0 0 1 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;Q96RS2 C9J9K3 C9J9K3 RPSA 40S ribosomal protein SA MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.8494 3 694.356951 2080.04902 71834.23 0.90922 0.00063133 0.033716 2.3411E-05 0.94294 0.00065474 694.69137954233 701.029265446747 115.92 0.6849 115.92 115.55 116.23 7.6294E-06 103 29 8 0 0 0 0.0014425 1 68023 50.608 50.608 1 1.8329 1.5533 0 8788400 3105600 5682800 11876 119 4527 4647 18526 18526 FTQAGSEVSALLGR 14 0 1 Unmodified _FTQAGSEVSALLGR_ 0 0 0 H0YH81;Q0QEN7;V9HW31;P06576;F8W0P7 H0YH81 H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.8486 2 718.380623 1434.74669 72765.34 0.75773 0.00054434 -0.011363 -8.1629E-06 0.74637 0.00053618 718.381500338076 723.384475221249 94.402 0.47387 94.402 94.146 94.62 -7.6294E-06 133 44 5 0 0 0 0.0012627 1 57307 77.062 77.062 1 1.3972 1.413 0 15334000 5990800 9343500 11877 1292 4528 4648 18527 18527 FTQAGSEVSALLGR 14 0 1 Unmodified _FTQAGSEVSALLGR_ 0 0 0 H0YH81;Q0QEN7;V9HW31;P06576;F8W0P7 H0YH81 H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.3821 2 718.380623 1434.74669 73384.74 0.84173 0.00060468 0.28371 0.00020381 1.1254 0.00080849 718.381044656998 723.384881888053 108.02 0.4171 108.02 107.78 108.2 0 88 23 5 0 0 0 0.0085091 1 61979 38.58 34.426 1 0.46586 0.39156 0 3100800 1869600 1231200 11878 1292 4528 4648 18528 18528 FTQLDLEDVQVR 12 0 1 Unmodified _FTQLDLEDVQVR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.8815 2 731.880456 1461.74636 70533.91 0.72641 0.00053164 -0.0010896 -7.9746E-07 0.72532 0.00053085 731.880494086419 736.884617204064 96.929 1.0349 96.929 96.447 97.481 0 597 90 10 0 0 0 2.3965E-29 2 58857 168.74 126.4 1 0.81979 0.96958 0 286940000 156120000 130810000 11879 2070 4529 4649 18529;18530 18529 FTQLDLEDVQVR 12 0 1 Unmodified _FTQLDLEDVQVR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.881 2 731.880456 1461.74636 NaN NaN NaN 1.7507 0.0012813 NaN NaN NaN NaN 97.479 0.31563 97.479 97.447 97.762 0 0 0 0 0.031001 1 59662 57.348 39.912 1 NaN NaN 0 7192600 7192600 0 11880 2070 4529 4649 18531 18531 FTQLDLEDVQVR 12 0 1 Unmodified _FTQLDLEDVQVR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.8865 2 731.880456 1461.74636 70278.73 0.68378 0.00050045 0.20706 0.00015154 0.89084 0.00065199 731.880605815315 736.88468137871 96.182 0.93232 96.182 95.831 96.763 7.6294E-06 604 80 10 0 0 0 6.259E-13 2 59792 133.81 123.28 1 0.81962 0.95271 0 377090000 203990000 173100000 11881 2070 4529 4649 18532;18533 18533 FTQLDLEDVQVR 12 0 1 Unmodified _FTQLDLEDVQVR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.8849 2 731.880456 1461.74636 69101.14 0.7522 0.00055052 0.045995 3.3663E-05 0.7982 0.00058419 731.880708441331 736.884619038335 109.96 1.6371 109.96 109.66 111.3 7.6294E-06 399 79 11 0 0 0 1.846E-12 2 63308 125.75 118.37 1 1.676 1.4519 0 154780000 56480000 98298000 11882 2070 4529 4649 18534;18535 18534 FTQLDLEDVQVR 12 0 1 Unmodified _FTQLDLEDVQVR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 736.8848 2 731.880456 1461.74636 70526.37 0.82727 0.00060546 -0.051128 -3.7419E-05 0.77615 0.00056805 731.880683741273 736.884531704555 109.92 1.9579 109.92 109.57 111.53 0 450 100 11 0 0 0 8.1739E-18 2 62312 141.88 134.23 1 1.6982 1.4832 0 180770000 68368000 112400000 11883 2070 4529 4649 18536;18537 18536 FTQQNYHDR 9 0 1 Unmodified _FTQQNYHDR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.7765 2 604.775793 1207.53703 NaN NaN NaN NaN NaN NaN NaN NaN NaN 15.278 1 15.278 14.778 15.778 9.5367E-07 0 0 0 0.0024676 1 3025 84.615 54.805 1 11884 1183 4530 4650 18538 18538 FTQTSGETTDADKEPAGEDK 20 2 0 Unmodified _FTQTSGETTDADKEPAGEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.6504 3 709.650194 2125.92875 71494.09 0.51375 0.00036458 -0.22217 -0.00015766 0.29158 0.00020692 709.984538189921 714.992863664236 20.502 0.82132 20.502 20.345 21.166 0 209 37 13 0 0 0 4.1376E-52 2 6878 154.19 154.19 1 2.2475 2.6509 0 325310000 88630000 236680000 11885 1569 4531 4651 18539;18540 18540 FTQTSGETTDADKEPAGEDK 20 2 0 Unmodified _FTQTSGETTDADKEPAGEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1071.9879 2 1063.97165 2125.92875 59225.34 0.17253 0.00018357 -0.094829 -0.00010089 0.077705 8.2676E-05 1063.97125578143 1071.98570583903 20.585 0.39192 20.585 20.371 20.763 1.9073E-06 105 17 9 0 0 0 1.669E-140 2 6895 269.92 264.76 1 2.2529 2.6596 0 58223000 19565000 38659000 11886 1569 4531 4651 18541;18542 18541 FTQTSGETTDADKEPAGEDK 20 2 0 Unmodified _FTQTSGETTDADKEPAGEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.3278 3 709.650194 2125.92875 71751.49 0.65753 0.00046661 0.078514 5.5718E-05 0.73604 0.00052233 709.984752976325 714.993077478346 20.487 0.80876 20.487 20.302 21.111 0 153 30 13 0 0 0 1.7296E-94 2 6719 211.33 206.72 1 2.3143 2.7024 0 423420000 137650000 285770000 11887 1569 4531 4651 18543;18544 18543 FTQTSGETTDADKEPAGEDK 20 2 0 Unmodified _FTQTSGETTDADKEPAGEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.4735 2 1063.97165 2125.92875 58929.31 0.37519 0.00039919 0.040267 4.2843E-05 0.41545 0.00044203 1064.47286678038 1071.98597930046 20.464 0.34077 20.464 20.324 20.665 0 74 10 10 0 0 0 5.7673E-203 2 6767 285.94 285.94 1 2.1726 2.5179 0 64375000 20833000 43541000 11888 1569 4531 4651 18545;18546 18546 FTQTSGETTDADKEPAGEDK 20 2 0 Unmodified _FTQTSGETTDADKEPAGEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.6511 3 709.650194 2125.92875 71211.69 0.47428 0.00033657 0.085075 6.0373E-05 0.55936 0.00039695 709.984906305344 714.99321510304 23.026 1.4334 23.026 22.804 24.237 0 292 72 13 0 0 0 8.6185E-18 2 7583 113.51 113.51 1 3.9203 3.3064 0 162940000 31898000 131040000 11889 1569 4531 4651 18547;18548 18548 FTQTSGETTDADKEPAGEDK 20 2 0 Unmodified _FTQTSGETTDADKEPAGEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1071.9865 2 1063.97165 2125.92875 58532.79 -0.084596 -9.0008E-05 0.3348 0.00035622 0.2502 0.00026621 1064.47365843255 1071.98606579476 23.024 0.48259 23.024 22.846 23.329 0 127 20 11 0 0 0 0.03741 1 7565 30.483 30.483 1 3.7691 3.2136 0 20089000 4001500 16087000 11890 1569 4531 4651 18549 18549 FTQTSGETTDADKEPAGEDK 20 2 0 Unmodified _FTQTSGETTDADKEPAGEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.993 3 709.650194 2125.92875 70964.77 0.40397 0.00028668 -0.27056 -0.000192 0.13342 9.4679E-05 709.984645044123 714.992888450909 23.163 1.9064 23.163 22.867 24.774 0 368 101 13 0 0 0 1.0348E-06 3 7134 68.49 68.49 1 4.0887 3.5034 0 119160000 24017000 95144000 11891 1569 4531 4651 18550;18551;18552 18550 FTSDTKPIINK 11 2 0 Unmodified _FTSDTKPIINK_ 0 0 1 Q8N1F7;A8K897;H3BVG0 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3649 2 632.350803 1262.68705 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.018 1 30.018 29.518 30.518 -1.9073E-06 0 0 0 0.0014225 1 14625 77.14 48.931 1 11892 1904 4532 4652 18553 18553 FTTDDSICVLGISK 14 1 0 Unmodified _FTTDDSICVLGISK_ 0 0 0 Q01813;Q8WTZ9;O14943;B1APP8;H0Y757;Q49A78 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.3979 2 778.387256 1554.75996 NaN NaN NaN 0.51921 0.00040415 NaN NaN NaN NaN 100.15 0.65546 100.15 100.02 100.67 0 0 0 0 0.0039168 1 61308 60.49 43.054 1 NaN NaN 0 8556100 0 8556100 11893 1677 4533 4653 18554 18554 FTTDDSICVLGISK 14 1 0 Unmodified _FTTDDSICVLGISK_ 0 0 0 Q01813;Q8WTZ9;O14943;B1APP8;H0Y757;Q49A78 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.3875 2 778.387256 1554.75996 NaN NaN NaN -0.076861 -5.9827E-05 NaN NaN NaN NaN 100.22 0.099884 100.22 100.15 100.25 0 0 0 0 0.0041794 1 61397 59.57 44.304 1 NaN NaN 0 4575500 4575500 0 11894 1677 4533 4653 18555 18555 FTTEEEVDYTVEK 13 1 0 Unmodified _FTTEEEVDYTVEK_ 0 0 0 H7C0I5;H0YGN5;B4DNL7;Q5QP19;Q53FP3;B2R5S3;Q9Y697 H7C0I5 H7C0I5 NFS1 Cysteine desulfurase, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.8665 2 795.364501 1588.71445 NaN NaN NaN -2.0442 -0.0016259 NaN NaN NaN NaN 65.607 0.35396 65.607 65.477 65.831 0 0 0 0 0.041897 1 37790 41.109 25.537 1 NaN NaN 0 4920700 4920700 0 11895 834 4534 4654 18556 18556 FTVAELK 7 1 0 Unmodified _FTVAELK_ 0 0 0 Q13435;Q7Z3K9;E9PPJ0 Q13435 Q13435 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.2411 2 404.234179 806.453805 NaN NaN NaN 0.62633 0.00025319 NaN NaN NaN NaN 60.338 0.51452 60.338 60.106 60.62 0 0 0 0 0.03991 1 35222 63.306 29.949 1 NaN NaN 0 14687000 0 14687000 11896 1713 4535 4655 18557 18557 FTVETACK 8 1 0 Unmodified _FTVETACK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 482.2386 2 478.23131 954.448068 89184.57 -0.042212 -2.0187E-05 1.6675 0.00079745 1.6253 0.00077726 478.231623283 482.238451001898 35.936 0.53253 35.936 35.745 36.277 0 182 43 6 0 0 0 0.011754 2 16047 69.198 47.427 1 1.107 0.87157 0 5751300 2886700 2864600 11897 1679 4536 4656 18558;18559 18559 FTVETACK 8 1 0 Unmodified _FTVETACK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.2385 2 478.23131 954.448068 90760.8 0.34477 0.00016488 0.75318 0.00036019 1.0979 0.00052507 478.231566627473 482.23821857498 35.819 0.60897 35.819 35.655 36.264 0 167 53 5 0 0 0 0.030747 2 15498 51.736 36.954 1 1.218 0.95254 0 3712300 1661900 2050300 11898 1679 4536 4656 18560;18561 18560 FTVETASR 8 0 1 Unmodified _FTVETASR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.7347 2 455.735074 909.455596 89584.52 0.052941 2.4127E-05 -0.061565 -2.8057E-05 -0.0086237 -3.9301E-06 455.735058552961 460.739107027261 30.61 0.99816 30.61 30.376 31.374 0 498 89 9 0 0 0 0.0019889 2 14898 103.91 34.731 1 0.74137 0.88102 0 1073400000 605590000 467770000 11899 1471 4537 4657 18562;18563 18563 FTVETASR 8 0 1 Unmodified _FTVETASR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.7359 2 455.735074 909.455596 88644.06 0.090708 4.1339E-05 -0.16689 -7.6058E-05 -0.076182 -3.4719E-05 455.735097471598 460.739043582069 30.058 1.1418 30.058 29.835 30.977 0 495 95 10 0 0 0 0.0009698 2 14577 122.13 49.99 1 0.73968 0.87393 0 1407700000 791120000 616540000 11900 1471 4537 4657 18564;18565 18564 FTVETASR 8 0 1 Unmodified _FTVETASR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 455.7359 2 455.735074 909.455596 89650.88 0.26398 0.0001203 -0.56193 -0.00025609 -0.29795 -0.00013579 455.734964326995 460.738829022744 34.542 1.791 34.542 34.256 36.047 0 626 147 10 0 0 0 0.014196 2 15148 63.565 26.605 1 1.2766 1.1081 0 210840000 94124000 116720000 11901 1471 4537 4657 18566;18567 18567 FTVETASR 8 0 1 Unmodified _FTVETASR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 455.7356 2 455.735074 909.455596 87348.98 0.14502 6.6092E-05 -0.62429 -0.00028451 -0.47927 -0.00021842 455.735006882719 460.738786205462 34.646 0.97967 34.646 34.386 35.366 0 420 79 10 0 0 0 0.014196 2 14758 63.565 23.462 1 1.2438 1.0864 0 221690000 99519000 122170000 11902 1471 4537 4657 18568;18569 18569 FTVETR 6 0 1 Unmodified _FTVETR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 376.7006 2 376.700503 751.386454 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.01 1 28.01 27.51 28.51 1.9073E-06 0 0 0 0.033955 1 13231 86.121 30.073 1 11903 1504 4538 4658 18570 18570 FTVLFPSGTPLPAR 14 0 1 Unmodified _FTVLFPSGTPLPAR_ 0 0 0 Q0VDF9 Q0VDF9 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.9221 2 751.921926 1501.8293 71015.29 0.6582 0.00049492 0.07408 5.5703E-05 0.73228 0.00055062 752.4234014219 756.92606205978 115.48 0.48689 115.48 115.29 115.77 7.6294E-06 113 33 4 0 0 0 0.000217 2 73510 66.92 66.92 1 1.6614 1.6608 0 16495000 7011200 9483600 11904 1697 4539 4659 18571;18572 18571 FTVLFPSGTPLPAR 14 0 1 Unmodified _FTVLFPSGTPLPAR_ 0 0 0 Q0VDF9 Q0VDF9 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.9261 2 751.921926 1501.8293 70362.08 0.83428 0.00062732 -0.07509 -5.6462E-05 0.75919 0.00057085 751.921744864916 756.925887581026 114.93 0.45068 114.93 114.73 115.18 7.6294E-06 102 28 5 0 0 0 7.8285E-07 2 74939 110.38 110.38 1 1.8795 1.8756 0 16711000 6453500 10257000 11905 1697 4539 4659 18573;18574 18574 FTVLFPSGTPLPAR 14 0 1 Unmodified _FTVLFPSGTPLPAR_ 0 0 0 Q0VDF9 Q0VDF9 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.9267 2 751.921926 1501.8293 71884.44 0.77097 0.00057971 -0.17733 -0.00013334 0.59364 0.00044637 751.921597715413 756.925936141343 126.95 0.44077 126.95 126.75 127.19 0 69 18 5 0 0 0 0.0063408 1 76487 42.243 42.243 1 1.0929 0.94903 0 2206900 823420 1383500 11906 1697 4539 4659 18575 18575 FTVPMLK 7 1 0 Oxidation (M) _FTVPM(ox)LK_ FTVPM(1)LK FTVPM(55.6)LK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.2388 2 426.238407 850.462261 94318.88 -0.051133 -2.1795E-05 0.36948 0.00015749 0.31834 0.00013569 426.238575690037 430.245406042206 78.511 0.99632 78.511 77.947 78.943 0 316 85 7 0 0 0 0.023663 2 46337 55.604 43.672 1 0.53769 0.59858 0 61059000 38053000 23005000 11907 82 4540 4660 18576;18577 18576 78 FTVPMLK 7 1 0 Oxidation (M) _FTVPM(ox)LK_ FTVPM(1)LK FTVPM(48.17)LK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.2384 2 426.238407 850.462261 NaN NaN NaN 0.27304 0.00011638 NaN NaN NaN NaN 77.049 1.0942 77.049 76.582 77.676 0 0 0 0 0.024085 1 45361 48.174 32.02 1 NaN NaN 0 25727000 25727000 0 11908 82 4540 4660 18578 18578 78 FTVPMLK 7 1 0 Oxidation (M) _FTVPM(ox)LK_ FTVPM(1)LK FTVPM(48.17)LK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.2383 2 426.238407 850.462261 92714.02 -0.2311 -9.8505E-05 0.42036 0.00017917 0.18926 8.067E-05 426.238495154789 430.245524381541 75.909 1.1437 75.909 75.367 76.511 0 388 102 6 0 0 0 0.032161 1 45662 48.174 48.174 1 0.57428 0.64174 0 94068000 62027000 32041000 11909 82 4540 4660 18579 18579 78 FTVPMLK 7 1 0 Oxidation (M) _FTVPM(ox)LK_ FTVPM(1)LK FTVPM(55.6)LK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.2386 2 426.238407 850.462261 92258.53 -0.047101 -2.0076E-05 0.3605 0.00015366 0.31339 0.00013358 426.238477489956 430.245469419879 77.344 0.88936 77.344 76.871 77.761 0 284 73 5 0 0 0 0.023663 3 46654 55.604 38.535 1 0.58057 0.65362 0 57346000 35222000 22124000 11910 82 4540 4660 18580;18581;18582 18581 78 FTVVVLR 7 0 1 Unmodified _FTVVVLR_ 0 0 0 A8K2S1;P47712;B4DZI4;Q14064 A8K2S1 A8K2S1 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.2655 2 417.265813 832.517074 96085.3 0.40482 0.00016892 -0.026316 -1.0981E-05 0.37851 0.00015794 417.265762085032 422.269853805826 85.152 0.50293 85.152 84.878 85.381 0 96 42 4 0 0 0 0.031504 1 51127 67.035 37.697 1 3.1981 3.3498 0 12554000 3294700 9259100 11911 712 4541 4661 18583 18583 FTYAGCLSVK 10 1 0 Unmodified _FTYAGCLSVK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.2858 2 573.286617 1144.55868 NaN NaN NaN -0.99953 -0.00057302 NaN NaN NaN NaN 69.683 0.89378 69.683 69.133 70.027 0 0 0 0 0.00086727 1 40464 89.08 65.286 1 NaN NaN 0 39153000 39153000 0 11912 979 4542 4662 18584 18584 FTYAGCLSVK 10 1 0 Unmodified _FTYAGCLSVK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.2942 2 573.286617 1144.55868 79004.27 0.32219 0.00018471 0.076155 4.3658E-05 0.39834 0.00022836 573.28622393102 577.293987575137 80.109 1.059 80.109 79.389 80.448 7.6294E-06 171 68 6 0 0 0 0.0029037 2 43198 66.962 66.962 1 0.93222 0.75331 0 22908000 11465000 11443000 11913 979 4542 4662 18585;18586 18585 FTYAGCLSVK 10 1 0 Unmodified _FTYAGCLSVK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.2949 2 573.286617 1144.55868 79403.3 0.40418 0.00023171 -0.16198 -9.286E-05 0.24221 0.00013885 573.286054234169 577.293858618411 80.354 1.199 80.354 79.644 80.843 0 194 76 7 0 0 0 0.0091807 1 42472 55.064 55.064 1 0.94936 0.7617 0 18547000 9576800 8970200 11914 979 4542 4662 18587 18587 FVADGIFK 8 1 0 Unmodified _FVADGIFK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;E9PQ96;E9PJH4;E9PK82;E9PQX2 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.7542 2 448.747453 895.480354 90909.06 -0.057674 -2.5881E-05 0.38447 0.00017253 0.3268 0.00014665 448.747586632244 452.754607805755 81.61 1.4017 81.61 81.052 82.454 0 568 121 8 0 0 0 0.016959 2 48340 60.76 45.539 1 1.125 1.3259 0 329100000 154120000 174980000 11915 1511 4543 4663 18588;18589 18588 FVADGIFK 8 1 0 Unmodified _FVADGIFK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;E9PQ96;E9PJH4;E9PK82;E9PQX2 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.7549 2 448.747453 895.480354 89522.15 0.094403 4.2363E-05 0.22746 0.00010207 0.32187 0.00014444 448.747511057914 452.754519744337 80.293 1.4269 80.293 79.892 81.319 7.6294E-06 549 116 8 0 0 0 0.022274 3 48788 57.281 45.719 1 1.1633 1.3463 0 205710000 93002000 112710000 11916 1511 4543 4663 18590;18591;18592 18590 FVADGIFK 8 1 0 Unmodified _FVADGIFK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;E9PQ96;E9PJH4;E9PK82;E9PQX2 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 452.7539 2 448.747453 895.480354 90310.76 -0.13499 -6.0576E-05 -0.064473 -2.8932E-05 -0.19946 -8.9508E-05 448.747416644487 452.754490530487 92.423 1.1557 92.423 91.985 93.141 0 294 65 8 0 0 0 0.061251 1 50482 39.646 32.822 1 1.1026 0.91122 0 11709000 5898600 5810800 11917 1511 4543 4663 18593 18593 FVASCGFTPDVK 12 1 0 Unmodified _FVASCGFTPDVK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3289 2 664.321188 1326.62782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.484 1 73.484 72.984 73.984 0 0 0 0 0.0056837 1 43108 63.184 49.831 1 11918 582 4544 4664 18594 18594 FVASCGFTPDVK 12 1 0 Unmodified _FVASCGFTPDVK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3207 2 664.321188 1326.62782 NaN NaN NaN -0.19126 -0.00012706 NaN NaN NaN NaN 72.472 0.35567 72.472 72.268 72.623 7.6294E-06 0 0 0 0.00052467 1 43450 94.692 84.235 1 NaN NaN 0 4764900 4764900 0 11919 582 4544 4664 18595 18595 FVASCGFTPDVK 12 1 0 Unmodified _FVASCGFTPDVK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3286 2 664.321188 1326.62782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.289 1 72.289 71.789 72.789 0 0 0 0 0.0043245 1 43385 65.278 51.924 1 11920 582 4544 4664 18596 18596 FVASCGFTPDVK 12 1 0 Unmodified _FVASCGFTPDVK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3286 2 664.321188 1326.62782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.428 1 72.428 71.928 72.928 0 0 0 0 0.00031986 1 43474 81.771 68.418 1 11921 582 4544 4664 18597 18597 FVASCGFTPDVK 12 1 0 Unmodified _FVASCGFTPDVK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.3289 2 664.321188 1326.62782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.891 1 83.891 83.391 84.391 0 0 0 0 0.052502 1 44979 42.21 31.979 1 11922 582 4544 4664 18598 18598 FVCEGTVEEK 10 1 0 Unmodified _FVCEGTVEEK_ 0 0 0 A0A024R0F1;Q9UNY4;X6RI15 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.2768 2 599.276446 1196.53834 NaN NaN NaN -0.28442 -0.00017045 NaN NaN NaN NaN 31.845 0.48359 31.845 31.629 32.112 0 0 0 0 1.6519E-05 1 15730 104.2 72.971 1 NaN NaN 0 5333800 5333800 0 11923 44 4545 4665 18599 18599 FVCEGTVEEK 10 1 0 Unmodified _FVCEGTVEEK_ 0 0 0 A0A024R0F1;Q9UNY4;X6RI15 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.2767 2 599.276446 1196.53834 NaN NaN NaN -0.47721 -0.00028598 NaN NaN NaN NaN 31.233 0.54213 31.233 30.977 31.519 -1.9073E-06 0 0 0 0.010728 1 15339 62.582 49.994 1 NaN NaN 0 5666400 5666400 0 11924 44 4545 4665 18600 18600 FVCEGTVEEK 10 1 0 Unmodified _FVCEGTVEEK_ 0 0 0 A0A024R0F1;Q9UNY4;X6RI15 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.2838 2 599.276446 1196.53834 79540.21 0.46429 0.00027824 -0.27657 -0.00016574 0.18772 0.0001125 599.27626760574 603.283394869492 36.888 0.46886 36.888 36.635 37.104 0 131 39 4 0 0 0 0.015104 1 16095 48.794 43.806 1 1.4464 1.1673 0 2544700 1113200 1431600 11925 44 4545 4665 18601 18601 FVCIYHVR 8 0 1 Unmodified _FVCIYHVR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.1923 3 365.1919 1092.55387 100432 -0.23111 -8.4399E-05 0.16695 6.0968E-05 -0.064159 -2.343E-05 365.191905062099 368.528075352902 53.126 0.36771 53.126 52.965 53.332 3.8147E-06 89 28 6 0 0 0 0.00064296 2 29638 91.906 66.169 1 0.85302 0.8524 0 16536000 8045800 8489800 11926 1756 4546 4666 18602;18603 18602 FVCIYHVR 8 0 1 Unmodified _FVCIYHVR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 365.1925 3 365.1919 1092.55387 101699 0.19232 7.0235E-05 0.030565 1.1162E-05 0.22289 8.1397E-05 365.191800199939 368.528046269411 50.719 0.35527 50.719 50.573 50.928 0 54 28 4 0 0 0 0.0039063 1 28630 69.998 34.118 1 0.80641 0.80203 0 7691800 3391700 4300100 11927 1756 4546 4666 18604 18604 FVDEGSLYGLSIATSR 16 0 1 Unmodified _FVDEGSLYGLSIATSR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7;J3QR85;J3QRG0;J3QLD6 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.9406 2 857.935959 1713.85737 65780.08 0.87914 0.00075424 -0.11722 -0.00010056 0.76192 0.00065368 857.935707068251 862.939973665628 107.62 0.87044 107.62 107.27 108.14 0 410 66 9 0 0 0 3.2197E-10 6 66873 112.51 109.32 1 0.86844 0.97545 0 93682000 52803000 40878000 11928 876 4547 4667 18605;18606;18607;18608;18609;18610 18608 FVDEGSLYGLSIATSR 16 0 1 Unmodified _FVDEGSLYGLSIATSR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7;J3QR85;J3QRG0;J3QLD6 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.9406 2 857.935959 1713.85737 65146.85 0.75973 0.0006518 -0.030797 -2.6422E-05 0.72893 0.00062537 857.935682936032 862.940053699012 107.04 0.92991 107.04 106.71 107.64 0 371 65 10 0 0 0 3.4696E-12 4 68092 118.37 118.37 1 0.90226 1.0258 0 121330000 63700000 57633000 11929 876 4547 4667 18611;18612;18613;18614 18611 FVDEGSLYGLSIATSR 16 0 1 Unmodified _FVDEGSLYGLSIATSR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7;J3QR85;J3QRG0;J3QLD6 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 862.9406 2 857.935959 1713.85737 65506.87 0.74816 0.00064187 0.054295 4.6582E-05 0.80245 0.00068845 857.935879846783 862.940117732652 118.75 1.0437 118.75 118.42 119.47 0 269 46 9 0 0 0 1.1119E-06 3 70109 96.591 96.591 1 1.3305 1.1445 0 49328000 21744000 27585000 11930 876 4547 4667 18615;18616;18617 18616 FVDEGSLYGLSIATSR 16 0 1 Unmodified _FVDEGSLYGLSIATSR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7;J3QR85;J3QRG0;J3QLD6 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 863.4418 2 857.935959 1713.85737 65221.27 0.75793 0.00065025 0.071333 6.12E-05 0.82926 0.00071145 857.935813215345 862.940013303553 118.57 0.94415 118.57 118.29 119.23 0 323 42 12 0 0 0 1.7733E-05 4 69054 86.291 86.291 1 1.283 1.1194 0 50520000 22602000 27918000 11931 876 4547 4667 18618;18619;18620;18621 18619 FVDFNDPNFGDELK 14 1 0 Unmodified _FVDFNDPNFGDELK_ 0 0 0 F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 F2Z2U4 F2Z2U4 TRRAP Transformation/transcription domain-associated protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.8797 2 828.880652 1655.74675 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.84 1 105.84 105.34 106.34 0 0 0 0 0.049419 1 67299 40.496 29.973 1 11932 1253 4548 4668 18622 18622 FVDGLMIHSGDPVNYYVDTAVR 22 0 1 Oxidation (M) _FVDGLM(ox)IHSGDPVNYYVDTAVR_ FVDGLM(1)IHSGDPVNYYVDTAVR FVDGLM(107.57)IHSGDPVNYYVDTAVR 0 1 0 P23396;Q53G83;E9PL09;H0YEU2;A7E2S3;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.0685 3 828.733646 2483.17911 66322.8 0.7433 0.000616 -0.07904 -6.5503E-05 0.66426 0.00055049 829.068016861212 832.404126274408 106.85 1.0037 106.85 106.47 107.47 0 588 77 11 0 0 0 1.8057E-16 1 66303 107.57 99.861 1 1.4859 1.706 0 138970000 60551000 78416000 11933 1511 4549 4669 18623 18623 1281 FVDGLMIHSGDPVNYYVDTAVR 22 0 1 Oxidation (M) _FVDGLM(ox)IHSGDPVNYYVDTAVR_ FVDGLM(1)IHSGDPVNYYVDTAVR FVDGLM(56.06)IHSGDPVNYYVDTAVR 0 1 0 P23396;Q53G83;E9PL09;H0YEU2;A7E2S3;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.4035 3 828.733646 2483.17911 66512.48 0.91875 0.0007614 -0.30457 -0.00025241 0.61418 0.00050899 829.067827720134 832.403853482122 106.17 1.1327 106.17 105.76 106.89 0 575 86 11 0 0 0 1.091E-07 2 67346 56.055 56.055 1 1.5247 1.7625 0 260340000 104080000 156260000 11934 1511 4549 4669 18624;18625 18625 1281 FVDGLMIHSGDPVNYYVDTAVR 22 0 1 Oxidation (M) _FVDGLM(ox)IHSGDPVNYYVDTAVR_ FVDGLM(1)IHSGDPVNYYVDTAVR FVDGLM(52.03)IHSGDPVNYYVDTAVR 0 1 0 P23396;Q53G83;E9PL09;H0YEU2;A7E2S3;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 829.0688 3 828.733646 2483.17911 66486.44 0.70191 0.0005817 0.015385 1.275E-05 0.7173 0.00059445 829.067990187585 832.40424498205 117.32 0.76756 117.32 117.13 117.9 7.6294E-06 210 34 9 0 0 0 1.6645E-07 1 69104 52.03 44.226 1 0.78011 0.64952 0 22199000 12144000 10055000 11935 1511 4549 4669 18626 18626 1281 FVDGLMIHSGDPVNYYVDTAVR 22 0 1 Oxidation (M) _FVDGLM(ox)IHSGDPVNYYVDTAVR_ FVDGLM(1)IHSGDPVNYYVDTAVR FVDGLM(69.03)IHSGDPVNYYVDTAVR 0 1 0 P23396;Q53G83;E9PL09;H0YEU2;A7E2S3;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.4048 3 828.733646 2483.17911 67072.23 0.723 0.00059918 0.12 9.9447E-05 0.843 0.00069862 829.068019305252 832.404034449293 117.18 0.68279 117.18 116.91 117.6 0 202 30 9 0 0 0 1.2273E-08 1 68036 69.03 69.03 1 0.78308 0.6612 0 17883000 11099000 6784100 11936 1511 4549 4669 18627 18627 1281 FVDGLMIHSGDPVNYYVDTAVR 22 0 1 Unmodified _FVDGLMIHSGDPVNYYVDTAVR_ 0 0 0 P23396;Q53G83;E9PL09;H0YEU2;A7E2S3;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.074 3 823.402008 2467.1842 NaN NaN NaN -2.5344 -0.0020869 NaN NaN NaN NaN 121.83 0.68877 121.83 121.43 122.12 0 0 0 0 0.00012459 1 71662 42.612 34.524 1 NaN NaN 0 9790000 0 9790000 11937 1511 4549 4670 18628 18628 FVDGLTFK 8 1 0 Unmodified _FVDGLTFK_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;Q9H8T8 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.7596 2 463.752736 925.490919 91792 0.46862 0.00021733 0.26177 0.0001214 0.73039 0.00033872 463.752634793058 467.759762876216 82.2 0.58548 82.2 81.91 82.495 0 135 50 5 0 0 0 0.041092 1 48999 46.994 31.362 1 1.2987 1.2752 0 8766400 3429000 5337400 11938 1102 4550 4671 18629 18629 FVDGVSTVAR 10 0 1 Unmodified _FVDGVSTVAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7861 2 525.782556 1049.55056 87859.05 0.45781 0.00024071 -0.20614 -0.00010839 0.25166 0.00013232 525.782465711321 530.786253432115 47.682 0.46354 47.682 47.386 47.85 3.8147E-06 95 40 4 0 0 0 0.017404 1 25824 47.869 34.29 1 1.2718 1.2707 0 16548000 7180500 9367200 11939 69 4551 4672 18630 18630 FVDGVSTVAR 10 0 1 Unmodified _FVDGVSTVAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.7822 2 525.782556 1049.55056 82815.85 0.28682 0.0001508 -0.83502 -0.00043904 -0.54821 -0.00028824 525.782528484827 530.786719013899 50.068 1.1332 50.068 49.535 50.668 0 548 98 9 0 0 0 0.00013082 3 27577 96.331 79.555 1 1.0419 1.235 0 527430000 279360000 248070000 11940 69 4551 4672 18631;18632;18633 18632 FVDGVSTVAR 10 0 1 Unmodified _FVDGVSTVAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7871 2 525.782556 1049.55056 82522.46 0.3492 0.0001836 -0.91208 -0.00047956 -0.56289 -0.00029596 525.782583950933 530.786680665525 48.808 1.7689 48.808 48.247 50.015 0 611 142 8 0 0 0 0.00126 2 27326 74.464 60.885 1 0.98195 1.1445 0 469810000 238700000 231110000 11941 69 4551 4672 18634;18635 18634 FVDGVSTVAR 10 0 1 Unmodified _FVDGVSTVAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.7871 2 525.782556 1049.55056 83391.4 0.40007 0.00021035 -0.67043 -0.0003525 -0.27036 -0.00014215 525.782647358315 530.786629255919 57.547 1.9508 57.547 56.738 58.689 0 625 143 7 0 0 0 0.02883 3 29042 43.272 34.058 1 1.8111 1.5502 0 40161000 14089000 26072000 11942 69 4551 4672 18636;18637;18638 18636 FVDGVSTVAR 10 0 1 Unmodified _FVDGVSTVAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.2856 2 525.782556 1049.55056 81396.15 0.38432 0.00020207 -0.72605 -0.00038174 -0.34173 -0.00017968 525.782502435129 530.786522100865 57.924 1.8577 57.924 57.244 59.102 3.8147E-06 630 138 8 0 0 0 0.0061736 5 28663 59.153 45.204 1 1.8086 1.5776 0 36259000 13194000 23065000 11943 69 4551 4672 18639;18640;18641;18642;18643 18640 FVDILGLR 8 0 1 Unmodified _FVDILGLR_ 0 0 0 A0A087WUB9;Q8WYA6 A0A087WUB9 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7821 2 466.781828 931.549102 NaN NaN NaN -0.46492 -0.00021702 NaN NaN NaN NaN 108.98 0.45235 108.98 108.83 109.29 0 0 0 0 0.049526 1 68032 50.127 27.995 1 NaN NaN 0 2012400 2012400 0 11944 409 4552 4673 18644 18644 FVDILGLR 8 0 1 Unmodified _FVDILGLR_ 0 0 0 A0A087WUB9;Q8WYA6 A0A087WUB9 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.7858 2 466.781828 931.549102 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.9 1 108.9 108.4 109.4 7.6294E-06 0 0 0 0.026145 1 68086 64.757 32.822 1 11945 409 4552 4673 18645 18645 FVDILGLR 8 0 1 Unmodified _FVDILGLR_ 0 0 0 A0A087WUB9;Q8WYA6 A0A087WUB9 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.7862 2 466.781828 931.549102 NaN NaN NaN 0.184 8.5887E-05 NaN NaN NaN NaN 108.26 0.32639 108.26 108.04 108.37 0 0 0 0 0.033237 1 69230 57.281 27.708 1 NaN NaN 0 1943300 0 1943300 11946 409 4552 4673 18646 18646 FVDILGLR 8 0 1 Unmodified _FVDILGLR_ 0 0 0 A0A087WUB9;Q8WYA6 A0A087WUB9 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7818 2 466.781828 931.549102 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.14 1 108.14 107.64 108.64 0 0 0 0 0.0063187 1 69153 81.784 46.96 1 11947 409 4552 4673 18647 18647 FVDILTNWYVR 11 0 1 Unmodified _FVDILTNWYVR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.8872 2 713.379894 1424.74524 NaN NaN NaN 0.042997 3.0674E-05 NaN NaN NaN NaN 122.36 0.56548 122.36 122.02 122.58 -7.6294E-06 0 0 0 0.0067665 1 79196 63.216 48.542 1 NaN NaN 0 2557800 0 2557800 11948 1561 4553 4674 18648 18648 FVDILTNWYVR 11 0 1 Unmodified _FVDILTNWYVR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.3848 2 713.379894 1424.74524 NaN NaN NaN -0.28644 -0.00020434 NaN NaN NaN NaN 121.81 0.51618 121.81 121.57 122.09 -7.6294E-06 0 0 0 7.8582E-05 1 80717 95.502 73.416 1 NaN NaN 0 2910700 0 2910700 11949 1561 4553 4674 18649 18649 FVDLYGAQK 9 1 0 Unmodified _FVDLYGAQK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.774 2 520.7742 1039.53385 87871.41 0.72815 0.0003792 -0.21951 -0.00011431 0.50864 0.00026489 520.773886385145 524.78147066144 60.23 0.52324 60.23 60.002 60.525 -3.8147E-06 139 40 5 0 0 0 0.001453 2 34323 85.212 61.239 1 1.0604 1.0386 0 22080000 11050000 11030000 11950 1228 4554 4675 18650;18651 18650 FVDLYGAQK 9 1 0 Unmodified _FVDLYGAQK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.7819 2 520.7742 1039.53385 83701.43 0.63405 0.0003302 -0.15843 -8.2506E-05 0.47563 0.00024769 520.77383113501 524.781458652667 59.018 0.47658 59.018 58.819 59.295 0 143 44 5 0 0 0 0.0011494 3 34259 89.296 59.958 1 1.1237 1.1875 0 35555000 17072000 18484000 11951 1228 4554 4675 18652;18653;18654 18652 FVDLYGAQK 9 1 0 Unmodified _FVDLYGAQK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.7747 2 520.7742 1039.53385 86255.74 0.1236 6.4366E-05 0.84407 0.00043957 0.96767 0.00050394 520.774334912153 524.781863961492 69.356 0.40977 69.356 69.165 69.574 0 80 27 4 0 0 0 0.055495 1 36346 36.557 25.684 1 1.1795 0.97315 0 2351700 1194600 1157200 11952 1228 4554 4675 18655 18655 FVDLYGAQK 9 1 0 Unmodified _FVDLYGAQK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.7742 2 520.7742 1039.53385 89681.46 0.22673 0.00011808 0.57716 0.00030057 0.80389 0.00041865 520.774437948533 524.78175080697 69.864 0.47617 69.864 69.587 70.063 0 89 35 4 0 0 0 0.014435 1 35814 55.676 39.522 1 1.1142 0.86507 0 2170300 1177500 992780 11953 1228 4554 4675 18656 18656 FVDPNTQEK 9 1 0 Unmodified _FVDPNTQEK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.2761 2 539.264196 1076.51384 NaN NaN NaN 3.4849 0.0018793 NaN NaN NaN NaN 24.452 0.31469 24.452 24.279 24.594 0 0 0 0 0.042566 1 10229 49.423 10.46 1 NaN NaN 0 7046800 0 7046800 11954 397;1622 4555 4676 18657 18657 FVEGTNINR 9 0 1 Unmodified _FVEGTNINR_ 0 0 0 B2R6H3;Q8NI77;Q4G194 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.2762 2 525.272355 1048.53016 86024.29 0.15207 7.9878E-05 -0.19626 -0.00010309 -0.044193 -2.3213E-05 525.272437034587 530.276304777174 38.15 0.36178 38.15 37.953 38.315 0 88 28 4 0 0 0 0.047679 1 16822 38.962 35.028 1 1.5245 1.3081 0 1068400 582400 486040 11955 842 4556 4677 18658 18658 FVEGVCPFCGYEEAR 15 0 1 Unmodified _FVEGVCPFCGYEEAR_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9;H0YIC2 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 915.3985 2 910.392547 1818.77054 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.795 1 89.795 89.295 90.295 0 0 0 0 0.00012712 1 55473 89.301 80.891 1 11956 732 4557 4678 18659 18659 FVELPGAEMGK 11 1 0 Oxidation (M) _FVELPGAEM(ox)GK_ FVELPGAEM(1)GK FVELPGAEM(57.86)GK 0 1 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.3036 2 597.297181 1192.57981 NaN NaN NaN -0.53363 -0.00031874 NaN NaN NaN NaN 64.102 0.74352 64.102 63.759 64.502 0 0 0 0 0.0034267 1 36695 57.859 40.619 1 NaN NaN 0 10065000 0 10065000 11957 1454 4558 4679 18660 18660 1160 FVELPGAEMGK 11 1 0 Oxidation (M) _FVELPGAEM(ox)GK_ FVELPGAEM(1)GK FVELPGAEM(67.21)GK 0 1 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3035 2 597.297181 1192.57981 NaN NaN NaN -0.29819 -0.00017811 NaN NaN NaN NaN 62.86 0.73994 62.86 62.588 63.328 0 0 0 0 0.0011246 1 36969 67.207 45.7 1 NaN NaN 0 14652000 0 14652000 11958 1454 4558 4679 18661 18661 1160 FVESQVESESSVLNDSPFPEDDSEGLHSDSR 31 0 1 Unmodified _FVESQVESESSVLNDSPFPEDDSEGLHSDSR_ 0 0 0 Q99549;B3KS10;A0A0A0MT47 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1142.5012 3 1142.16936 3423.48625 58599.25 0.3967 0.00045309 -0.054332 -6.2056E-05 0.34236 0.00039104 1142.83750698372 1146.17371687245 97.213 0.40573 97.213 96.992 97.398 -7.6294E-06 143 31 7 0 0 0 1.3351E-12 2 60752 56.46 56.46 1 0.81707 0.81041 0 15867000 8177800 7689400 11959 1994 4559 4680 18662;18663 18663 FVESQVESESSVLNDSPFPEDDSEGLHSDSR 31 0 1 Unmodified _FVESQVESESSVLNDSPFPEDDSEGLHSDSR_ 0 0 0 Q99549;B3KS10;A0A0A0MT47 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1145.8401 3 1142.16936 3423.48625 57179.46 0.17634 0.00020141 0.48326 0.00055196 0.65959 0.00075337 1142.50334338959 1145.50756171285 110.47 0.5231 110.47 110.24 110.77 0 128 25 8 0 0 0 0.019675 1 63774 16.368 16.34 1 1.8152 1.5615 0 6953600 3031500 3922100 11960 1994 4559 4680 18664 18664 FVEVGR 6 0 1 Unmodified _FVEVGR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 353.6977 2 353.697764 705.380974 100934.8 -0.22102 -7.8175E-05 -0.34623 -0.00012246 -0.56725 -0.00020064 353.697427054247 358.701763457927 32.907 0.76576 32.907 32.616 33.382 0 190 53 8 0 0 0 0.060836 1 14274 83.229 18.831 1 0.94654 0.81578 0 67253000 34028000 33224000 11961 645;725 4560 4681 18665 18665 FVEVGR 6 0 1 Unmodified _FVEVGR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 353.6976 2 353.697764 705.380974 101246.5 -0.084992 -3.0061E-05 -0.39311 -0.00013904 -0.4781 -0.0001691 353.697423233406 358.701726500516 32.913 0.7137 32.913 32.578 33.292 0 168 42 8 0 0 0 0.060836 1 13761 83.229 18.831 1 0.84979 0.7414 0 51798000 27479000 24319000 11962 645;725 4560 4681 18666 18666 FVFFNIPQIQYK 12 1 0 Unmodified _FVFFNIPQIQYK_ 0 0 0 P82663;E7EPW2 P82663 P82663 MRPS25 28S ribosomal protein S25, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.9224 2 772.41902 1542.82349 69049.8 1.0427 0.00080541 -0.28431 -0.00021961 0.7584 0.0005858 772.418372508786 776.42564810972 125.73 0.54469 125.73 125.47 126.01 0 181 36 7 0 0 0 0.000204 3 81707 89.698 89.698 1 1.4393 1.501 0 12254000 5353400 6900700 11963 1667 4561 4682 18667;18668;18669 18668 FVFFNIPQIQYK 12 1 0 Unmodified _FVFFNIPQIQYK_ 0 0 0 P82663;E7EPW2 P82663 P82663 MRPS25 28S ribosomal protein S25, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.4265 2 772.41902 1542.82349 69563.7 0.82226 0.00063513 -0.24935 -0.0001926 0.57291 0.00044253 772.92014287451 776.425628383899 125.3 0.54723 125.3 125.04 125.59 7.6294E-06 199 38 8 0 0 0 1.0415E-12 2 83406 131.06 131.06 1 1.5241 1.5401 0 16366000 7199000 9166500 11964 1667 4561 4682 18670;18671 18671 FVFGTTPEDILR 12 0 1 Unmodified _FVFGTTPEDILR_ 0 0 0 A0PJG0;CON__Q28194;A0A024R9Q1;P07996 A0PJG0 A0PJG0 THBS1 Thrombospondin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.8737 2 697.86936 1393.72417 78305.48 0.5842 0.00040769 0.53517 0.00037348 1.1194 0.00078117 697.869481832191 702.873442301035 114.58 0.44952 114.58 114.32 114.77 0 72 31 4 0 0 0 0.0001947 2 72728 77.677 69.752 1 0.6713 0.69908 0 5239200 2618900 2620300 + 11965 286 4562 4683 18672;18673 18672 FVFGTTPEDILR 12 0 1 Unmodified _FVFGTTPEDILR_ 0 0 0 A0PJG0;CON__Q28194;A0A024R9Q1;P07996 A0PJG0 A0PJG0 THBS1 Thrombospondin-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8695 2 697.86936 1393.72417 NaN NaN NaN 0.29084 0.00020297 NaN NaN NaN NaN 113.94 0.39691 113.94 113.81 114.21 7.6294E-06 0 0 0 0.041638 1 73986 43.282 23.495 1 NaN NaN 0 3246200 3246200 0 + 11966 286 4562 4683 18674 18674 FVFGTTPEDILR 12 0 1 Unmodified _FVFGTTPEDILR_ 0 0 0 A0PJG0;CON__Q28194;A0A024R9Q1;P07996 A0PJG0 A0PJG0 THBS1 Thrombospondin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.8745 2 697.86936 1393.72417 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.86 1 113.86 113.36 114.36 0 0 0 0 0.03116 1 73970 45.137 25.866 1 + 11967 286 4562 4683 18675 18675 FVFMLSTR 8 0 1 Oxidation (M) _FVFM(ox)LSTR_ FVFM(1)LSTR FVFM(53.97)LSTR 0 1 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.7686 2 508.76532 1015.51609 NaN NaN NaN -1.1645 -0.00059244 NaN NaN NaN NaN 88.149 0.46471 88.149 87.963 88.428 0 0 0 0 0.012378 1 54416 53.968 36.728 1 NaN NaN 0 22598000 0 22598000 11968 1391 4563 4684 18676 18676 1063 FVFMLSTR 8 0 1 Oxidation (M) _FVFM(ox)LSTR_ FVFM(1)LSTR FVFM(49.42)LSTR 0 1 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.7646 2 508.76532 1015.51609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.182 1 88.182 87.682 88.682 0 0 0 0 0.030456 1 54394 49.418 22.816 1 11969 1391 4563 4684 18677 18677 1063 FVFMLSTR 8 0 1 Oxidation (M) _FVFM(ox)LSTR_ FVFM(1)LSTR FVFM(51.35)LSTR 0 1 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.7672 2 508.76532 1015.51609 NaN NaN NaN -1.0258 -0.0005219 NaN NaN NaN NaN 101.92 0.29991 101.92 101.82 102.12 0 0 0 0 0.014458 1 57794 51.346 30.826 1 NaN NaN 0 1769900 0 1769900 11970 1391 4563 4684 18678 18678 1063 FVFMLSTR 8 0 1 Oxidation (M) _FVFM(ox)LSTR_ FVFM(1)LSTR FVFM(44.35)LSTR 0 1 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.7696 2 508.76532 1015.51609 NaN NaN NaN -0.21769 -0.00011075 NaN NaN NaN NaN 102.38 0.60892 102.38 102.12 102.73 0 0 0 0 0.020007 2 57316 44.349 31.312 1 NaN NaN 0 1655400 0 1655400 11971 1391 4563 4684 18679;18680 18679 1063 FVFMLSTR 8 0 1 Unmodified _FVFMLSTR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.7723 2 500.767863 999.521173 87865.59 0.35325 0.0001769 0.39983 0.00020022 0.75308 0.00037712 500.768114467521 505.772144709234 113.04 0.71609 113.04 112.73 113.44 -7.6294E-06 89 34 5 0 0 0 0.027047 1 64848 54.157 33.637 1 5.2686 4.6012 0 2576900 449460 2127500 11972 1391 4563 4685 18681 18681 FVGGVYGGNIK 11 1 0 Unmodified _FVGGVYGGNIK_ 0 0 0 Q8NAV1 Q8NAV1 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.8014 2 555.800749 1109.58694 NaN NaN NaN -0.48087 -0.00026727 NaN NaN NaN NaN 58.631 0.44068 58.631 58.388 58.828 0 0 0 0 0.021191 1 33304 52.786 29.262 1 NaN NaN 0 7838400 7838400 0 11973 1917 4564 4686 18682 18682 FVGQDVEGER 10 0 1 Unmodified _FVGQDVEGER_ 0 0 0 P17812;B4E1E0 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.2753 2 568.272552 1134.53055 78602.87 0.32839 0.00018661 -0.68624 -0.00038997 -0.35785 -0.00020336 568.272358292734 573.275687642785 33.262 0.40164 33.262 33.082 33.484 0 119 35 5 0 0 0 0.010458 1 16602 53.327 43.096 1 1.7226 1.8695 0 28052000 10582000 17470000 11974 1494 4565 4687 18683 18683 FVIATSTK 8 1 0 Unmodified _FVIATSTK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 437.7599 2 433.752736 865.490919 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.869 1 45.869 45.369 46.369 0 0 0 0 0.030744 1 24727 62.546 41.282 1 11975 342 4566 4688 18684 18684 FVIATSTK 8 1 0 Unmodified _FVIATSTK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.7522 2 433.752736 865.490919 NaN NaN NaN 0.42558 0.0001846 NaN NaN NaN NaN 44.523 0.84764 44.523 44.098 44.946 -3.8147E-06 0 0 0 0.011463 1 24103 75.213 45.875 1 NaN NaN 0 477010000 477010000 0 11976 342 4566 4688 18685 18685 FVIATSTK 8 1 0 Unmodified _FVIATSTK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.7594 2 433.752736 865.490919 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.176 1 44.176 43.676 44.676 0 0 0 0 0.012787 1 24102 73.248 43.91 1 11977 342 4566 4688 18686 18686 FVIATSTK 8 1 0 Unmodified _FVIATSTK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 437.7597 2 433.752736 865.490919 89931.7 -0.42465 -0.00018419 0.58656 0.00025442 0.16191 7.0228E-05 433.752762883248 437.759803083826 51.828 1.4993 51.828 51.341 52.84 0 799 120 10 0 0 0 0.022631 2 25430 57.047 33.075 1 0.80624 0.66981 0 46322000 24906000 21416000 11978 342 4566 4688 18687;18688 18688 FVIATSTK 8 1 0 Unmodified _FVIATSTK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 437.7599 2 433.752736 865.490919 89561.73 -0.31772 -0.00013781 0.28923 0.00012546 -0.028487 -1.2356E-05 433.752652260534 437.759652175095 52.012 1.3819 52.012 51.515 52.897 3.8147E-06 652 107 10 0 0 0 0.015121 1 24926 61.962 37.99 1 0.82558 0.69008 0 43905000 23112000 20793000 11979 342 4566 4688 18689 18689 FVIGGPQGDAGLTGR 15 0 1 Unmodified _FVIGGPQGDAGLTGR_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.8812 2 722.88079 1443.74703 71142.38 0.79012 0.00057116 0.09018 6.519E-05 0.8803 0.00063635 722.880912927625 727.884960020551 80.535 0.79357 80.535 80.233 81.026 0 318 68 8 0 0 0 0.00021948 3 47826 71.806 71.806 1 1.9329 2.1388 0 60562000 21397000 39165000 11980 606 4567 4689 18690;18691;18692 18690 FVIGGPQGDAGLTGR 15 0 1 Unmodified _FVIGGPQGDAGLTGR_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.8825 2 722.88079 1443.74703 70276.96 0.91249 0.00065962 0.55433 0.00040071 1.4668 0.0010603 722.8819193191 727.884985037647 79.554 0.6633 79.554 79.265 79.928 7.6294E-06 286 54 8 0 0 0 4.3705E-05 2 48220 85.845 85.845 1 1.4345 1.6549 0 71594000 28529000 43064000 11981 606 4567 4689 18693;18694 18694 FVIGGPQGDAGLTGR 15 0 1 Unmodified _FVIGGPQGDAGLTGR_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.885 2 722.88079 1443.74703 71567.22 0.73991 0.00053487 0.21144 0.00015284 0.95135 0.00068771 722.881058995449 727.884920032204 91.961 0.63687 91.961 91.674 92.311 0 227 39 8 0 0 0 0.00022 2 51057 63.727 55.595 1 1.1546 0.98859 0 8657000 4090900 4566100 11982 606 4567 4689 18695;18696 18695 FVIGGPQGDAGLTGR 15 0 1 Unmodified _FVIGGPQGDAGLTGR_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.8845 2 722.88079 1443.74703 71176.16 0.54693 0.00039537 0.2847 0.0002058 0.83163 0.00060117 722.881169155629 727.88493310861 91.83 0.74556 91.83 91.531 92.277 0 216 43 8 0 0 0 0.0006361 2 50159 53.252 50.029 1 1.1554 0.95912 0 7712800 3715700 3997100 11983 606 4567 4689 18697;18698 18697 FVIHCNSPVWGADK 14 1 0 Unmodified _FVIHCNSPVWGADK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.3992 2 815.39575 1628.77695 66636.28 0.69065 0.00056315 -0.27539 -0.00022455 0.41526 0.0003386 815.396474505103 819.402069630315 70.879 0.69974 70.879 70.532 71.232 0 275 54 7 0 0 0 0.00014511 3 41160 77.597 77.597 1 0.88335 0.86547 0 21536000 10768000 10768000 11984 1401 4568 4690 18699;18700;18701 18700 FVIHCNSPVWGADK 14 1 0 Unmodified _FVIHCNSPVWGADK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.2678 3 543.932925 1628.77695 NaN NaN NaN -0.41192 -0.00022406 NaN NaN NaN NaN 70.891 1.4139 70.891 70.414 71.828 0 0 0 0 8.488E-05 2 41204 65.374 52.542 1 NaN NaN 0 73691000 73691000 0 11985 1401 4568 4690 18702;18703 18702 FVIHCNSPVWGADK 14 1 0 Unmodified _FVIHCNSPVWGADK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.2673 3 543.932925 1628.77695 81670.74 0.55607 0.00030246 -0.041518 -2.2583E-05 0.51455 0.00027988 543.932971268759 546.604399058955 69.137 1.3098 69.137 68.739 70.049 0 525 110 7 0 0 0 0.00015769 3 40918 58.723 48.298 1 0.86498 1.002 0 211260000 110100000 101170000 11986 1401 4568 4690 18704;18705;18706 18704 FVIHCNSPVWGADK 14 1 0 Unmodified _FVIHCNSPVWGADK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.4035 2 815.39575 1628.77695 67263.65 0.68134 0.00055556 -0.22578 -0.0001841 0.45555 0.00037146 815.396157018725 819.903245607237 69.115 0.7496 69.115 68.819 69.569 0 256 62 6 0 0 0 2.4267E-21 2 41043 146.36 137.61 1 0.91599 0.94479 0 32690000 15314000 17375000 11987 1401 4568 4690 18707;18708 18707 FVIHCNSPVWGADK 14 1 0 Unmodified _FVIHCNSPVWGADK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.9053 2 815.39575 1628.77695 66847.94 0.49358 0.00040247 -0.16774 -0.00013678 0.32584 0.00026569 815.395793732483 819.402740457321 80.353 1.1131 80.353 80.043 81.156 0 379 75 8 0 0 0 0.00021467 1 43319 67.252 67.252 1 1.2384 0.96765 0 11907000 4979300 6927300 11988 1401 4568 4690 18709 18709 FVIHCNSPVWGADK 14 1 0 Unmodified _FVIHCNSPVWGADK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.2676 3 543.932925 1628.77695 81828.91 0.47158 0.00025651 0.14875 8.0909E-05 0.62033 0.00033742 543.933032161441 546.604466653994 80.352 1.8977 80.352 79.996 81.894 -7.6294E-06 571 122 6 0 0 0 4.5522E-05 2 43340 73.722 73.722 1 1.2599 1.0434 0 44467000 18740000 25727000 11989 1401 4568 4690 18710;18711 18710 FVIHCNSPVWGADK 14 1 0 Unmodified _FVIHCNSPVWGADK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 819.4025 2 815.39575 1628.77695 67365.86 0.63599 0.00051859 -0.3319 -0.00027063 0.30409 0.00024795 815.395572152158 819.402700539261 80.412 0.97888 80.412 80.06 81.039 0 352 64 9 0 0 0 0.0089749 2 42473 37.793 35.476 1 1.2347 1.019 0 11257000 4902700 6354100 11990 1401 4568 4690 18712;18713 18713 FVIHCNSPVWGADK 14 1 0 Unmodified _FVIHCNSPVWGADK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.9331 3 543.932925 1628.77695 80901.96 0.5183 0.00028192 -0.32697 -0.00017785 0.19133 0.00010407 543.932980071748 547.272522601957 80.416 2.1502 80.416 79.793 81.943 7.6294E-06 673 131 11 0 0 0 0.00046143 1 42488 45.54 37.565 1 1.4941 1.2492 0 44147000 16504000 27643000 11991 1401 4568 4690 18714 18714 FVINYDYPNSSEDYIHR 17 0 1 Unmodified _FVINYDYPNSSEDYIHR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.6654 3 711.328838 2130.96468 72727.23 0.78305 0.00055701 0.14894 0.00010595 0.932 0.00066296 711.329246936213 714.664980061334 88.938 0.80986 88.938 88.585 89.395 0 311 62 9 0 0 0 2.0433E-05 2 53781 73.252 73.252 1 1.193 1.3233 0 67269000 32789000 34480000 11992 1009 4569 4691 18715;18716 18716 FVINYDYPNSSEDYIHR 17 0 1 Unmodified _FVINYDYPNSSEDYIHR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.6655 3 711.328838 2130.96468 72991.77 0.75853 0.00053957 -0.35399 -0.0002518 0.40455 0.00028777 711.663053635514 714.99836491882 87.97 0.69923 87.97 87.674 88.373 0 267 58 7 0 0 0 2.3574E-05 2 54268 64.52 64.52 1 1.3089 1.5212 0 63055000 29866000 33189000 11993 1009 4569 4691 18717;18718 18718 FVINYDYPNSSEDYIHR 17 0 1 Unmodified _FVINYDYPNSSEDYIHR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 711.6642 3 711.328838 2130.96468 71902.05 0.57979 0.00041242 0.1826 0.00012989 0.76239 0.00054231 711.663298745569 714.999228129352 101.68 0.61404 101.68 101.39 102.01 0 265 39 10 0 0 0 0.020783 1 57548 15.422 15.422 1 1.0861 0.89245 0 17497000 8673900 8823100 11994 1009 4569 4691 18719 18719 FVINYDYPNSSEDYIHR 17 0 1 Unmodified _FVINYDYPNSSEDYIHR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.6658 3 711.328838 2130.96468 72259.95 0.51623 0.00036721 0.11562 8.2241E-05 0.63184 0.00044945 711.663237253092 714.999054598384 101.51 0.63435 101.51 101.24 101.87 0 256 43 10 0 0 0 0.00041888 2 56717 41.386 41.386 1 0.99104 0.8277 0 16155000 8100000 8054800 11995 1009 4569 4691 18720;18721 18721 FVINYDYPNSSEDYVHR 17 0 1 Unmodified _FVINYDYPNSSEDYVHR_ 0 0 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.9922 3 706.656954 2116.94903 72056.17 0.93946 0.00066388 0.038785 2.7408E-05 0.97825 0.00069129 706.991257292989 709.992991886703 96.268 0.57999 96.268 96.025 96.605 7.6294E-06 219 35 9 0 0 0 0.0052291 2 54035 27.271 27.271 1 1.0481 0.90222 0 7277400 3462900 3814500 11996 1801 4570 4692 18722;18723 18722 FVINYDYPNSSEDYVHR 17 0 1 Unmodified _FVINYDYPNSSEDYVHR_ 0 0 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.3276 3 706.656954 2116.94903 72069.44 0.43145 0.00030489 0.47437 0.00033522 0.90582 0.00064011 706.991377916906 709.993477277454 96.146 0.65537 96.146 95.884 96.539 0 227 40 8 0 0 0 0.038458 2 53110 17.021 17.021 1 0.99801 0.82867 0 5858400 2942800 2915600 11997 1801 4570 4692 18724;18725 18724 FVIQGAGAK 9 1 0 Unmodified _FVIQGAGAK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.7649 2 445.758352 889.502152 NaN NaN NaN -0.63865 -0.00028469 NaN NaN NaN NaN 39.364 0.36866 39.364 39.266 39.635 0 0 0 0 0.011876 1 20880 65.252 49.62 1 NaN NaN 0 14006000 0 14006000 11998 1205 4571 4693 18726 18726 FVITTTSR 8 0 1 Unmodified _FVITTTSR_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.7663 2 462.761092 923.507631 91196.27 0.44091 0.00020403 -0.045989 -2.1282E-05 0.39492 0.00018275 462.760922818217 467.765068190234 46.61 0.54625 46.61 46.261 46.807 0 142 46 5 0 0 0 0.017078 1 25116 60.682 49.809 1 1.0569 1.0932 0 23398000 11665000 11733000 11999 684 4572 4694 18727 18727 FVITTTSR 8 0 1 Unmodified _FVITTTSR_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.7664 2 462.761092 923.507631 90752.46 0.31277 0.00014474 -0.12788 -5.9177E-05 0.18489 8.5562E-05 462.760889626129 467.765110414468 45.699 0.57433 45.699 45.382 45.956 3.8147E-06 178 50 6 0 0 0 0.040852 1 25010 47.082 36.209 1 1.0499 1.1495 0 32496000 15715000 16781000 12000 684 4572 4694 18728 18728 FVITTTSR 8 0 1 Unmodified _FVITTTSR_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.765 2 462.761092 923.507631 90556.98 0.041625 1.9263E-05 0.092673 4.2886E-05 0.1343 6.2148E-05 462.76109936495 467.765045968176 53.581 0.65417 53.581 53.293 53.947 -3.8147E-06 156 46 6 0 0 0 0.059544 1 25975 40.268 37.262 1 0.92279 0.83251 0 2223500 1216100 1007400 12001 684 4572 4694 18729 18729 FVLDHEDGLNLNEDLENFLQK 21 1 0 Unmodified _FVLDHEDGLNLNEDLENFLQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.0755 3 834.743088 2501.20743 66572.02 1.144 0.00095496 -0.9206 -0.00076847 0.22341 0.00018649 834.742101382991 837.412988138268 125.34 0.35217 125.34 125.07 125.42 0 128 23 8 0 0 0 0.00088261 1 81408 31.279 31.279 1 0.93566 0.97809 0 15084000 5323800 9759900 12002 186;1747;718 4573 4695 18730 18730 FVLDHEDGLNLNEDLENFLQK 21 1 0 Unmodified _FVLDHEDGLNLNEDLENFLQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.7501 3 834.743088 2501.20743 66668.54 0.9999 0.00083466 -0.41351 -0.00034517 0.58639 0.00048949 835.076879730996 837.413935230253 125.51 0.55589 125.51 125.38 125.93 0 181 37 9 0 0 0 5.3888E-16 2 81569 105.79 105.79 1 0.90975 0.94674 0 11564000 5390600 6173200 12003 186;1747;718 4573 4695 18731;18732 18731 FVLDHEDGLNLNEDLENFLQK 21 1 0 Unmodified _FVLDHEDGLNLNEDLENFLQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.0779 3 834.743088 2501.20743 66570.46 1.2121 0.0010118 -0.9577 -0.00079943 0.2544 0.00021236 835.07701407962 837.411089093127 124.83 1.093 124.83 124.29 125.38 0 459 74 9 0 0 0 2.7385E-08 2 83030 68.952 68.952 1 0.96526 1.0062 0 24441000 11045000 13396000 12004 186;1747;718 4573 4695 18733;18734 18734 FVLDHEDGLNLNEDLENFLQK 21 1 0 Unmodified _FVLDHEDGLNLNEDLENFLQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 835.1793 3 834.743088 2501.20743 65707.98 0.84588 0.0007061 0.12413 0.00010362 0.97002 0.00080971 835.077284398952 837.748746900715 134.49 0.22012 134.49 134.37 134.59 0 29 8 5 0 0 0 9.221E-09 2 82128 74.776 74.776 1 1.9004 1.5635 0 39527000 15237000 24290000 12005 186;1747;718 4573 4695 18735;18736 18735 FVLDHEDGLNLNEDLENFLQK 21 1 0 Unmodified _FVLDHEDGLNLNEDLENFLQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 835.0779 3 834.743088 2501.20743 65809.91 0.72542 0.00060554 -0.36519 -0.00030484 0.36022 0.00030069 835.077483226071 838.082718583101 134.45 0.19579 134.45 134.36 134.56 0 23 6 5 0 0 0 0.041847 1 81224 12.448 12.448 1 1.1146 0.93188 0 44169000 22203000 21966000 12006 186;1747;718 4573 4695 18737 18737 FVLEWTWNK 9 1 0 Unmodified _FVLEWTWNK_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.8236 2 611.816399 1221.61824 81514.11 0.52001 0.00031815 0.11801 7.2198E-05 0.63802 0.00039035 611.816546133452 615.823757795914 112.96 0.56294 112.96 112.72 113.29 0 106 37 4 0 0 0 0.003664 1 73144 71.223 51.436 1 0.99131 0.985 0 6157000 3208500 2948400 12007 1945 4574 4696 18738 18738 FVLEWTWNK 9 1 0 Unmodified _FVLEWTWNK_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.8235 2 611.816399 1221.61824 80948.98 0.56025 0.00034277 0.21243 0.00012997 0.77268 0.00047274 611.816442493047 615.823519017715 124.59 0.67647 124.59 124.34 125.02 0 104 29 5 0 0 0 0.0070864 2 74609 62.546 42.217 1 2.3612 1.9405 0 2401400 695220 1706200 12008 1945 4574 4696 18739;18740 18739 FVLEWTWNK 9 1 0 Unmodified _FVLEWTWNK_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.8233 2 611.816399 1221.61824 80436.75 0.61849 0.0003784 -0.023847 -1.459E-05 0.59464 0.00036381 611.816496483051 615.823434953269 124.43 0.70298 124.43 124.15 124.85 -7.6294E-06 89 31 5 0 0 0 0.017639 2 73581 52.786 32.456 1 2.1308 1.7192 0 2541200 864110 1677100 12009 1945 4574 4696 18741;18742 18741 FVLNLIK 7 1 0 Unmodified _FVLNLIK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.7758 2 423.776014 845.537475 92073.29 0.36068 0.00015285 0.053279 2.2579E-05 0.41396 0.00017543 423.775931541106 427.782996004979 102.08 1.8593 102.08 101.65 103.51 0 771 155 8 0 0 0 0.026905 4 63146 82.263 43.241 1 0.9948 1.1739 0 355530000 180110000 175420000 12010 1934 4575 4697 18743;18744;18745;18746 18745 FVLNLIK 7 1 0 Unmodified _FVLNLIK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.7761 2 423.776014 845.537475 91310.2 0.048616 2.0602E-05 0.10994 4.6591E-05 0.15856 6.7193E-05 423.775927287149 427.783042766965 101.14 1.1597 101.14 100.76 101.92 7.6294E-06 544 91 8 0 0 0 0.010245 4 64022 111.69 69.667 1 0.95909 1.122 0 296520000 141720000 154800000 12011 1934 4575 4697 18747;18748;18749;18750 18750 FVLNLIK 7 1 0 Unmodified _FVLNLIK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.7761 2 423.776014 845.537475 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.4 1 102.4 101.9 102.9 0 0 0 0 0.034306 1 64627 72.021 31.1 1 12012 1934 4575 4697 18751 18751 FVLNLIK 7 1 0 Unmodified _FVLNLIK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 427.7831 2 423.776014 845.537475 91105.63 0.05805 2.46E-05 0.39314 0.00016661 0.45119 0.00019121 423.776094082584 427.783131482242 114.65 1.819 114.65 114.23 116.05 0 373 82 8 0 0 0 0.03153 1 66789 66.994 41.995 1 1.3916 1.146 0 40409000 17968000 22441000 12013 1934 4575 4697 18752 18752 FVNLGIEPPK 10 1 0 Unmodified _FVNLGIEPPK_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.3253 2 557.318774 1112.623 NaN NaN NaN -0.59085 -0.00032929 NaN NaN NaN NaN 88.941 0.99196 88.941 88.571 89.563 0 0 0 0 0.0047705 1 53510 71.349 58.993 1 NaN NaN 0 11613000 0 11613000 12014 620 4576 4698 18753 18753 FVNLGIEPPK 10 1 0 Unmodified _FVNLGIEPPK_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.3187 2 557.318774 1112.623 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.325 1 89.325 88.825 89.825 7.6294E-06 0 0 0 0.042499 1 53925 46.158 17.009 1 12015 620 4576 4698 18754 18754 FVNVVPTFGK 10 1 0 Unmodified _FVNVVPTFGK_ 0 0 0 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.3137 2 554.313492 1106.61243 80560.15 0.77748 0.00043097 -0.056368 -3.1246E-05 0.72111 0.00039972 554.313794103509 558.320393879054 94.181 2.708 94.181 93.467 96.175 0 1425 236 10 0 0 0 2.7898E-09 6 56774 126.07 126.07 1 0.79809 0.97424 0 3177800000 1816600000 1361200000 12016 1250 4577 4699 18755;18756;18757;18758;18759;18760 18756 FVNVVPTFGK 10 1 0 Unmodified _FVNVVPTFGK_ 0 0 0 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.3136 2 554.313492 1106.61243 82268.2 0.98483 0.0005459 0.53793 0.00029818 1.5228 0.00084408 554.313648106087 558.320922699947 96.505 0.54513 96.505 96.298 96.843 -7.6294E-06 132 45 4 0 0 0 0.0010607 2 58883 76.827 76.827 1 0.7858 0.80555 0 28527000 17277000 11250000 12017 1250 4577 4699 18761;18762 18762 FVNVVPTFGK 10 1 0 Unmodified _FVNVVPTFGK_ 0 0 0 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.3133 2 554.313492 1106.61243 85007.2 0.84389 0.00046778 0.85411 0.00047344 1.698 0.00094122 554.313709310988 558.320464160786 98.441 0.41982 98.441 98.251 98.671 0 77 34 5 0 0 0 0.0026779 1 60245 67.993 60.302 1 0.7394 0.73562 0 9611600 6237800 3373800 12018 1250 4577 4699 18763 18763 FVNVVPTFGK 10 1 0 Unmodified _FVNVVPTFGK_ 0 0 0 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.321 2 554.313492 1106.61243 80441.89 0.70816 0.00039254 -0.24212 -0.00013421 0.46604 0.00025833 554.313769511257 558.320293305557 93.156 2.1459 93.156 92.624 94.77 7.6294E-06 984 183 10 0 0 0 2.8741E-08 4 57996 120.12 120.12 1 0.81714 0.96856 0 3378900000 1855400000 1523400000 12019 1250 4577 4699 18764;18765;18766;18767 18766 FVNVVPTFGK 10 1 0 Unmodified _FVNVVPTFGK_ 0 0 0 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.3204 2 554.313492 1106.61243 NaN NaN NaN -0.10932 -6.0596E-05 NaN NaN NaN NaN 93.774 1.3707 93.774 93.738 95.108 0 0 0 0 0.0011917 1 58599 87.308 60.346 1 NaN NaN 0 92700000 0 92700000 12020 1250 4577 4699 18768 18768 FVNVVPTFGK 10 1 0 Unmodified _FVNVVPTFGK_ 0 0 0 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.3194 2 554.313492 1106.61243 NaN NaN NaN -1.3958 -0.00077373 NaN NaN NaN NaN 96.553 0.16041 96.553 96.432 96.592 0 0 0 0 0.011505 1 60167 61.78 36.043 1 NaN NaN 0 3758200 0 3758200 12021 1250 4577 4699 18769 18769 FVNVVPTFGK 10 1 0 Unmodified _FVNVVPTFGK_ 0 0 0 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.3138 2 554.313492 1106.61243 NaN NaN NaN 0.60151 0.00033342 NaN NaN NaN NaN 97.682 0.38567 97.682 97.573 97.959 0 0 0 0 0.01685 1 61062 56.258 42.61 1 NaN NaN 0 3309900 3309900 0 12022 1250 4577 4699 18770 18770 FVNVVPTFGK 10 1 0 Unmodified _FVNVVPTFGK_ 0 0 0 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.3141 2 554.313492 1106.61243 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.815 1 95.815 95.315 96.315 7.6294E-06 0 0 0 0.0068401 1 59697 61.679 53.739 1 12023 1250 4577 4699 18771 18771 FVNVVPTFGK 10 1 0 Unmodified _FVNVVPTFGK_ 0 0 0 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.3375 2 554.313492 1106.61243 85228.48 0.79217 0.00043911 0.072094 3.9962E-05 0.86427 0.00047908 554.313543092013 558.320030863683 97.364 0.5498 97.364 97.104 97.653 0 84 42 4 0 0 0 0.048649 1 60760 64.711 64.711 1 0.74228 0.77645 0 10354000 4444100 5910300 12024 1250 4577 4699 18772 18772 FVNVVPTFGK 10 1 0 Unmodified _FVNVVPTFGK_ 0 0 0 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.3138 2 554.313492 1106.61243 80777.45 0.52038 0.00028845 -0.096043 -5.3238E-05 0.42434 0.00023522 554.313698545591 558.320346472984 107.13 3.8354 107.13 106.68 110.51 -7.6294E-06 1055 207 12 0 0 0 9.6112E-06 6 61632 105.52 101.95 1 0.6472 0.57238 0 300150000 183740000 116410000 12025 1250 4577 4699 18773;18774;18775;18776;18777;18778 18776 FVNVVPTFGK 10 1 0 Unmodified _FVNVVPTFGK_ 0 0 0 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.314 2 554.313492 1106.61243 81091.17 0.61297 0.00033978 -0.2148 -0.00011907 0.39818 0.00022071 554.313623421235 558.320297019808 106.88 4.6814 106.88 106.43 111.11 0 1114 255 12 0 0 0 0.00022929 8 60395 93.111 89.364 1 0.62321 0.54115 0 299450000 180960000 118490000 12026 1250 4577 4699 18779;18780;18781;18782;18783;18784;18785;18786 18780 FVNVVPTFGKK 11 2 0 Unmodified _FVNVVPTFGKK_ 0 0 1 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 417.9192 3 412.576408 1234.70739 95590.04 -0.082878 -3.4193E-05 0.1645 6.787E-05 0.081625 3.3677E-05 412.576452913253 417.919309294881 84.012 0.74062 84.012 83.708 84.449 0 201 59 5 0 0 0 0.038925 1 45067 22.329 14.104 1 0.62851 0.53383 0 5915500 3034100 2881500 12027 1250 4578 4700 18787 18787 FVNWQVDGEYR 11 0 1 Unmodified _FVNWQVDGEYR_ 0 0 0 O96008;K7EKG4;K7EJ57 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.8367 2 706.833308 1411.65206 73956.63 0.74684 0.00052789 0.32044 0.0002265 1.0673 0.00075439 706.83386487082 711.837268189991 79.494 0.75914 79.494 79.138 79.897 7.6294E-06 308 67 7 0 0 0 0.00031294 1 46983 87.913 87.913 1 1.2937 1.3368 0 37161000 18536000 18624000 12028 1433 4579 4701 18788 18788 FVNWQVDGEYR 11 0 1 Unmodified _FVNWQVDGEYR_ 0 0 0 O96008;K7EKG4;K7EJ57 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.8363 2 706.833308 1411.65206 73757.41 0.41129 0.00029072 0.42591 0.00030105 0.8372 0.00059176 706.8344400909 711.837087600144 78.433 0.76505 78.433 78.092 78.857 0 314 65 8 0 0 0 2.8475E-06 1 47383 111.61 104.63 1 1.4474 1.6205 0 44996000 19448000 25548000 12029 1433 4579 4701 18789 18789 FVNWQVDGEYR 11 0 1 Unmodified _FVNWQVDGEYR_ 0 0 0 O96008;K7EKG4;K7EJ57 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 711.8377 2 706.833308 1411.65206 NaN NaN NaN 0.014049 9.9303E-06 NaN NaN NaN NaN 90.772 0.75764 90.772 90.476 91.234 0 0 0 0 0.021177 1 50212 52.79 49.534 1 NaN NaN 0 3427300 0 3427300 12030 1433 4579 4701 18790 18790 FVPAEMGTHTVSVK 14 1 0 Oxidation (M) _FVPAEM(ox)GTHTVSVK_ FVPAEM(1)GTHTVSVK FVPAEM(52.25)GTHTVSVK 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5C6;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.8925 2 759.884684 1517.75481 NaN NaN NaN -1.8973 -0.0014417 NaN NaN NaN NaN 37.855 0.26426 37.855 37.718 37.982 0 0 0 0 0.0030379 1 19342 52.247 33.935 1 NaN NaN 0 8005300 0 8005300 12031 1504 4580 4702 18791 18791 1266 FVPLLPGNR 9 0 1 Unmodified _FVPLLPGNR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.8007 2 506.800552 1011.58655 85843.87 0.67733 0.00034327 0.48956 0.00024811 1.1669 0.00059138 506.800513510615 511.805555715754 86.357 0.78262 86.357 86.023 86.806 -7.6294E-06 334 60 9 0 0 0 0.0061961 2 52024 64.803 53.435 1 0.60506 0.69862 0 157340000 105000000 52345000 12032 1665 4581 4703 18792;18793 18792 FVPLLPGNR 9 0 1 Unmodified _FVPLLPGNR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.8044 2 506.800552 1011.58655 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.369 1 85.369 84.869 85.869 0 0 0 0 0.012994 1 52523 60.76 23.739 1 12033 1665 4581 4703 18794 18794 FVPLLPGNR 9 0 1 Unmodified _FVPLLPGNR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.8012 2 506.800552 1011.58655 84423.38 0.35793 0.0001814 0.22674 0.00011491 0.58468 0.00029632 506.800546538312 511.804677494261 97.902 1.2936 97.902 97.523 98.816 0 281 79 8 0 0 0 0.044828 1 54282 40.103 30.353 1 0.32513 0.26463 0 9736600 7217200 2519400 12034 1665 4581 4703 18795 18795 FVPQDVPPEPK 11 1 0 Unmodified _FVPQDVPPEPK_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8323 2 626.832246 1251.64994 80027.49 0.64378 0.00040354 0.031753 1.9904E-05 0.67553 0.00042345 626.832540201981 630.838910482067 57.886 0.5817 57.886 57.676 58.257 0 125 46 6 0 0 0 0.017321 1 33679 45.368 26.592 1 0.56931 0.5699 0 13965000 8864400 5101000 12035 590 4582 4704 18796 18796 FVPQDVPPEPK 11 1 0 Unmodified _FVPQDVPPEPK_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8311 2 626.832246 1251.64994 76490.24 0.50557 0.00031691 -0.47214 -0.00029595 0.033431 2.0955E-05 626.831721695324 630.839005124748 68.161 0.75656 68.161 67.773 68.53 0 157 51 6 0 0 0 0.033049 1 35509 37.344 37.344 1 1.9377 1.6371 0 1974800 554090 1420700 12036 590 4582 4704 18797 18797 FVPYLIAGIQHSCQDIGAK 19 1 0 Unmodified _FVPYLIAGIQHSCQDIGAK_ 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.7022 3 706.366458 2116.07755 71837.38 0.81176 0.0005734 -0.26463 -0.00018692 0.54714 0.00038648 706.700762299262 709.371797993864 102.82 1.1307 102.82 102.55 103.68 7.6294E-06 415 92 8 0 0 0 2.8183E-06 3 65063 74.519 74.519 1 1.1666 1.2902 0 45159000 19478000 25681000 12037 1282 4583 4705 18798;18799;18800 18800 FVPYLIAGIQHSCQDIGAK 19 1 0 Unmodified _FVPYLIAGIQHSCQDIGAK_ 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.3732 3 706.366458 2116.07755 70099.11 0.92781 0.00065538 -0.18667 -0.00013186 0.74114 0.00052352 706.700772307928 709.371729976429 114.96 0.81532 114.96 114.73 115.55 7.6294E-06 224 38 8 0 0 0 0.0018549 2 67226 30.767 30.767 1 1.4474 1.1556 0 9237000 3708100 5528900 12038 1282 4583 4705 18801;18802 18801 FVPYLIAGIQHSCQDIGAK 19 1 0 Unmodified _FVPYLIAGIQHSCQDIGAK_ 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.3723 3 706.366458 2116.07755 72061.05 0.69097 0.00048808 -0.14066 -9.9354E-05 0.55032 0.00038872 706.700917213573 709.371672078014 114.76 0.81026 114.76 114.5 115.31 7.6294E-06 197 37 9 0 0 0 0.0098487 1 66119 22.646 22.646 1 1.5261 1.2527 0 9181900 4434500 4747400 12039 1282 4583 4705 18803 18803 FVQCPDGELQK 11 1 0 Unmodified _FVQCPDGELQK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.309 2 660.81627 1319.61799 NaN NaN NaN -0.91058 -0.00060173 NaN NaN NaN NaN 41.069 0.49446 41.069 40.826 41.32 0 0 0 0 0.002282 2 21675 76.1 51.206 1 NaN NaN 0 21816000 21816000 0 12040 2120 4584 4706 18804;18805 18805 FVQCPDGELQK 11 1 0 Unmodified _FVQCPDGELQK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.8245 2 660.81627 1319.61799 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.892 1 40.892 40.392 41.392 0 0 0 0 3.8163E-05 1 21449 85.676 54.447 1 12041 2120 4584 4706 18806 18806 FVQETELSQR 10 0 1 Unmodified _FVQETELSQR_ 0 0 0 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.8192 2 618.814584 1235.61462 NaN NaN NaN -0.21786 -0.00013481 NaN NaN NaN NaN 40.676 0.64603 40.676 40.37 41.016 0 0 0 0 1.7074E-09 1 21198 118.18 102.92 1 NaN NaN 0 23521000 0 23521000 12042 491 4585 4707 18807 18807 FVQETELSQR 10 0 1 Unmodified _FVQETELSQR_ 0 0 0 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.8179 2 618.814584 1235.61462 77782.15 0.7418 0.00045904 0.13471 8.3359E-05 0.87651 0.0005424 618.814682598172 623.818921219308 39.691 0.77958 39.691 39.309 40.089 0 313 67 7 0 0 0 2.4698E-05 2 20890 99.802 84.187 1 0.90917 0.99949 0 40682000 19619000 21062000 12043 491 4585 4707 18808;18809 18808 FVQETELSQR 10 0 1 Unmodified _FVQETELSQR_ 0 0 0 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8145 2 618.814584 1235.61462 77514.28 0.30438 0.00018835 -0.08456 -5.2327E-05 0.21981 0.00013602 618.814694994215 623.818670691185 46.807 1.1266 46.807 46.363 47.49 3.8147E-06 310 80 7 0 0 0 0.0022794 2 22686 69.812 65.028 1 2.0542 1.7667 0 6851600 2398400 4453200 12044 491 4585 4707 18810;18811 18811 FVQETELSQR 10 0 1 Unmodified _FVQETELSQR_ 0 0 0 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.8145 2 618.814584 1235.61462 77710.84 0.1641 0.00010155 0.10314 6.3823E-05 0.26724 0.00016537 618.814778609333 623.81888986037 47.198 1.0663 47.198 46.707 47.773 0 388 80 7 0 0 0 0.001108 2 22182 76.064 71.765 1 2.039 1.6994 0 6372400 2346100 4026400 12045 491 4585 4707 18812;18813 18813 FVQLEGAHPLEK 12 1 0 Unmodified _FVQLEGAHPLEK_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.3764 2 684.369527 1366.7245 NaN NaN NaN -0.45548 -0.00031172 NaN NaN NaN NaN 55.67 0.1524 55.67 55.597 55.75 0 0 0 0 0.0027417 1 31311 67.061 13.287 1 NaN NaN 0 4688500 0 4688500 12046 2007 4586 4708 18814 18814 FVQLEGAHPLEK 12 1 0 Unmodified _FVQLEGAHPLEK_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.3774 2 684.369527 1366.7245 NaN NaN NaN -0.39688 -0.00027161 NaN NaN NaN NaN 54.526 0.20666 54.526 54.417 54.623 0 0 0 0 0.0022647 1 31182 68.626 18.586 1 NaN NaN 0 7335400 0 7335400 12047 2007 4586 4708 18815 18815 FVSFLGR 7 0 1 Unmodified _FVSFLGR_ 0 0 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.2344 2 413.234513 824.454474 94563.88 0.12159 5.0245E-05 0.20648 8.5326E-05 0.32807 0.00013557 413.234526631822 418.238557939848 81.635 0.8811 81.635 81.283 82.164 0 257 76 5 0 0 0 0.026788 2 48551 78.994 43.823 1 1.1114 1.2164 0 52783000 27024000 25758000 12048 769 4587 4709 18816;18817 18817 FVSFLGR 7 0 1 Unmodified _FVSFLGR_ 0 0 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.2342 2 413.234513 824.454474 93946.58 0.1958 8.0912E-05 0.11013 4.5511E-05 0.30593 0.00012642 413.234505591445 418.238530810473 80.541 0.90238 80.541 80.088 80.99 0 277 72 6 0 0 0 0.0092764 1 48899 126.68 72.139 1 1.1621 1.2702 0 36296000 19614000 16682000 12049 769 4587 4709 18818 18818 FVSTTSQNTQLVR 13 0 1 Unmodified _FVSTTSQNTQLVR_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.8903 2 740.891355 1479.76816 NaN NaN NaN -2.2819 -0.0016907 NaN NaN NaN NaN 49.534 0.1652 49.534 49.414 49.579 0 0 0 0 0.0002806 1 27244 87.789 54.79 1 NaN NaN 0 2534500 2534500 0 12050 895 4588 4710 18819 18819 FVSTTSQNTQLVRPPIR 17 0 2 Unmodified _FVSTTSQNTQLVRPPIR_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3665 3 648.693563 1943.05886 75438.15 0.65535 0.00042512 0.056522 3.6665E-05 0.71187 0.00046179 649.027800906956 655.366229578817 68.878 0.817 68.878 68.467 69.284 0 413 71 8 0 0 0 3.3701E-05 2 39883 67.605 60.547 1 0.71634 0.779 0 50987000 31995000 18992000 12051 895 4589 4711 18820;18821 18821 FVSTTSQNTQLVRPPIR 17 0 2 Unmodified _FVSTTSQNTQLVRPPIR_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.694 3 648.693563 1943.05886 75028.05 0.75066 0.00048695 0.093944 6.0941E-05 0.8446 0.00054789 648.693563764793 655.366151127127 67.401 0.88582 67.401 66.903 67.789 7.6294E-06 380 73 9 0 0 0 2.2267E-05 2 39785 78.069 67.435 1 0.71733 0.82739 0 64555000 36176000 28380000 12052 895 4589 4711 18822;18823 18822 FVSTTSQNTQLVRPPIR 17 0 2 Unmodified _FVSTTSQNTQLVRPPIR_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.694 3 648.693563 1943.05886 74717.86 0.67718 0.00043928 0.093046 6.0358E-05 0.77023 0.00049964 649.02783681176 655.365826176608 78.513 1.101 78.513 78.129 79.23 0 422 68 10 0 0 0 0.00056599 1 42126 42.338 37.637 1 1.3483 1.1168 0 21168000 9094200 12074000 12053 895 4589 4711 18824 18824 FVSTTSQNTQLVRPPIR 17 0 2 Unmodified _FVSTTSQNTQLVRPPIR_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.3663 3 648.693563 1943.05886 75053.05 0.61533 0.00039916 0.25302 0.00016413 0.86835 0.00056329 649.027998604264 655.365859272667 78.622 1.0734 78.622 78.261 79.334 0 435 68 10 0 0 0 0.00062672 3 41262 41.412 35.753 1 1.3125 1.2091 0 15250000 6248600 9001900 12054 895 4589 4711 18825;18826;18827 18825 FVTDLLLHFIK 11 1 0 Unmodified _FVTDLLLHFIK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.405 2 673.397556 1344.78056 76895.1 1.0475 0.00070539 -0.45974 -0.00030958 0.58777 0.0003958 673.397147804983 677.404233779909 130.83 0.93607 130.83 130.26 131.2 0 156 61 4 0 0 0 0.00098444 2 85164 69.954 69.954 1 0.81462 0.8245 0 4729000 2551900 2177000 12055 1942 4590 4712 18828;18829 18828 FVTDLLLHFIK 11 1 0 Unmodified _FVTDLLLHFIK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.9384 3 449.267463 1344.78056 90858.73 0.53217 0.00023909 -0.49624 -0.00022294 0.035929 1.6142E-05 449.267122332109 451.938526244033 130.9 1.4059 130.9 130.09 131.5 0 274 92 6 0 0 0 0.015265 1 85453 34.755 34.755 1 0.76547 0.7987 0 11773000 5989300 5783600 12056 1942 4590 4712 18830 18830 FVTDLLLHFIK 11 1 0 Unmodified _FVTDLLLHFIK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 449.2673 3 449.267463 1344.78056 NaN NaN NaN -0.45069 -0.00020248 NaN NaN NaN NaN 131.18 1.053 131.18 131.11 132.16 0 0 0 0 0.025891 1 85977 32.008 32.008 1 NaN NaN 0 8659300 8659300 0 12057 1942 4590 4712 18831 18831 FVTDLLLHFIK 11 1 0 Unmodified _FVTDLLLHFIK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.9392 3 449.267463 1344.78056 NaN NaN NaN -0.27279 -0.00012256 NaN NaN NaN NaN 131.62 0.37637 131.62 131.48 131.86 0 0 0 0 0.042111 1 86052 33.088 29.767 1 NaN NaN 0 2408000 0 2408000 12058 1942 4590 4712 18832 18832 FVTDLLLHFIK 11 1 0 Unmodified _FVTDLLLHFIK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.2677 3 449.267463 1344.78056 89898.87 0.27023 0.00012141 -0.29799 -0.00013388 -0.027761 -1.2472E-05 449.267240145133 451.938659414212 130.11 1.812 130.11 129.44 131.26 0 509 124 6 0 0 0 0.0009531 2 86958 48.981 48.981 1 0.75579 0.76029 0 16061000 8478700 7582700 12059 1942 4590 4712 18833;18834 18833 FVTDLLLHFIK 11 1 0 Unmodified _FVTDLLLHFIK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.2672 3 449.267463 1344.78056 NaN NaN NaN -0.017249 -7.7494E-06 NaN NaN NaN NaN 129.42 0.33795 129.42 129.16 129.5 0 0 0 0 0.023607 1 86394 31.843 23.113 1 NaN NaN 0 3172200 3172200 0 12060 1942 4590 4712 18835 18835 FVTDLLLHFIK 11 1 0 Unmodified _FVTDLLLHFIK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3984 2 673.397556 1344.78056 NaN NaN NaN -0.26594 -0.00017908 NaN NaN NaN NaN 130.11 0.98906 130.11 129.67 130.66 0 0 0 0 0.014641 1 86705 54.722 34.936 1 NaN NaN 0 3533100 3533100 0 12061 1942 4590 4712 18836 18836 FVTDLLLHFIK 11 1 0 Unmodified _FVTDLLLHFIK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.4048 2 673.397556 1344.78056 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.57 1 129.57 129.07 130.07 0 0 0 0 0.0023425 1 86560 68.224 47.894 1 12062 1942 4590 4712 18837 18837 FVTDLLLHFIK 11 1 0 Unmodified _FVTDLLLHFIK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.4055 2 673.397556 1344.78056 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.73 1 130.73 130.23 131.23 0 0 0 0 0.030447 1 87427 48.794 33.643 1 12063 1942 4590 4712 18838 18838 FVTDSNAVVQLK 12 1 0 Unmodified _FVTDSNAVVQLK_ 0 0 0 Q14008;E9PQH5;Q8NAH3 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.8616 2 660.861534 1319.70852 NaN NaN NaN -0.089154 -5.8919E-05 NaN NaN NaN NaN 76.201 0.39364 76.201 76.027 76.421 0 0 0 0 0.037281 1 45996 44.882 20.727 1 NaN NaN 0 4992500 4992500 0 12064 1725 4591 4713 18839 18839 FVTSNTQELGK 11 1 0 Unmodified _FVTSNTQELGK_ 0 0 0 Q9BXP5;H7C3A1;Q7Z4Y3 Q9BXP5 Q9BXP5 SRRT Serrate RNA effector molecule homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.324 2 612.31696 1222.61937 79631.57 0.83696 0.00051249 0.052595 3.2205E-05 0.88956 0.00054469 612.316914795444 616.3241409264 38.779 0.50879 38.779 38.493 39.002 0 157 42 6 0 0 0 0.00032769 2 19917 87.149 74.572 1 1.2418 1.218 0 22712000 9831700 12880000 12065 2013 4592 4714 18840;18841 18840 FVTSNTQELGK 11 1 0 Unmodified _FVTSNTQELGK_ 0 0 0 Q9BXP5;H7C3A1;Q7Z4Y3 Q9BXP5 Q9BXP5 SRRT Serrate RNA effector molecule homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.3251 2 612.31696 1222.61937 80690.77 0.22324 0.00013669 0.083925 5.1389E-05 0.30716 0.00018808 612.317092670431 616.324285271364 37.84 0.53613 37.84 37.496 38.032 0 129 40 6 0 0 0 2.7847E-08 2 19677 120.99 99.99 1 1.7054 1.8423 0 38369000 12712000 25657000 12066 2013 4592 4714 18842;18843 18842 FVTSTSDHFVEGQTVAAK 18 1 0 Unmodified _FVTSTSDHFVEGQTVAAK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.3211 3 641.986412 1922.93741 75483.34 0.77264 0.00049602 0.0038818 2.4921E-06 0.77652 0.00049852 642.320429325031 644.65788678436 57.223 1.2682 57.223 56.705 57.973 3.8147E-06 536 102 8 0 0 0 9.7314E-23 3 32212 100.77 100.77 1 1.0113 1.1308 0 63483000 29694000 33788000 12067 1741 4593 4715 18844;18845;18846 18845 FVTSTSDHFVEGQTVAAK 18 1 0 Unmodified _FVTSTSDHFVEGQTVAAK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.6581 3 641.986412 1922.93741 75535.77 0.45231 0.00029038 0.05067 3.253E-05 0.50298 0.00032291 642.320605945405 644.657882598954 55.908 0.82697 55.908 55.523 56.35 0 459 65 9 0 0 0 8.5683E-23 4 32114 130.39 130.39 1 1.0257 1.1476 0 109080000 50946000 58138000 12068 1741 4593 4715 18847;18848;18849;18850 18850 FVTSTSDHFVEGQTVAAK 18 1 0 Unmodified _FVTSTSDHFVEGQTVAAK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.4843 2 962.47598 1922.93741 NaN NaN NaN 1.7675 0.0017012 NaN NaN NaN NaN 55.906 0.51609 55.906 55.653 56.169 0 0 0 0 0.0061122 1 32146 43.798 28.767 1 NaN NaN 0 10756000 0 10756000 12069 1741 4593 4715 18851 18851 FVTSTSDHFVEGQTVAAK 18 1 0 Unmodified _FVTSTSDHFVEGQTVAAK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 962.4756 2 962.47598 1922.93741 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.757 1 55.757 55.257 56.257 0 0 0 0 0.043251 1 31993 34 23.39 1 12070 1741 4593 4715 18852 18852 FVTSTSDHFVEGQTVAAK 18 1 0 Unmodified _FVTSTSDHFVEGQTVAAK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.3211 3 641.986412 1922.93741 75503.82 0.68373 0.00043895 -0.17245 -0.00011071 0.51128 0.00032824 642.320329778059 644.657727913343 66.568 1.4153 66.568 66.107 67.522 0 386 91 9 0 0 0 3.2889E-06 2 34587 77.39 77.39 1 1.3439 1.067 0 19025000 8583900 10441000 12071 1741 4593 4715 18853;18854 18854 FVTSTSDHFVEGQTVAAK 18 1 0 Unmodified _FVTSTSDHFVEGQTVAAK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.6583 3 641.986412 1922.93741 NaN NaN NaN 0.11686 7.5026E-05 NaN NaN NaN NaN 67.068 1.1582 67.068 66.717 67.875 0 0 0 0 2.7412E-06 1 34038 68.243 63.927 1 NaN NaN 0 8018700 0 8018700 12072 1741 4593 4715 18855 18855 FVTSTSDHFVEGQTVAAK 18 1 0 Unmodified _FVTSTSDHFVEGQTVAAK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.9869 3 641.986412 1922.93741 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.245 1 67.245 66.745 67.745 0 0 0 0 0.0021723 1 34213 56.851 35.758 1 12073 1741 4593 4715 18856 18856 FVVDLSDQVAPTDIEEGMR 19 0 1 Oxidation (M) _FVVDLSDQVAPTDIEEGM(ox)R_ FVVDLSDQVAPTDIEEGM(1)R FVVDLSDQVAPTDIEEGM(46.88)R 0 1 0 A0A140VK70;P35998;Q75L23;B7Z571 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1074.5184 2 1069.00953 2136.0045 58486.8 0.39366 0.00042082 0.095338 0.00010192 0.489 0.00052274 1069.50969159321 1074.51558574501 107.87 0.51546 107.87 107.62 108.14 0 102 38 6 0 0 0 8.235E-05 1 67155 46.88 46.88 1 2.3361 2.342 0 17069000 4373000 12696000 12074 620 4594 4716 18857 18857 478 FVVDLSDQVAPTDIEEGMR 19 0 1 Oxidation (M) _FVVDLSDQVAPTDIEEGM(ox)R_ FVVDLSDQVAPTDIEEGM(1)R FVVDLSDQVAPTDIEEGM(100.22)R 0 1 0 A0A140VK70;P35998;Q75L23;B7Z571 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1074.0155 2 1069.00953 2136.0045 NaN NaN NaN 2.0769 0.0022202 NaN NaN NaN NaN 107.39 0.58565 107.39 107.16 107.75 -7.6294E-06 0 0 0 1.4213E-13 1 68445 100.22 84.683 1 NaN NaN 0 13867000 0 13867000 12075 620 4594 4716 18858 18858 478 FVVLETGGEAGITR 14 0 1 Unmodified _FVVLETGGEAGITR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.8955 2 724.890823 1447.76709 NaN NaN NaN 0.49205 0.00035669 NaN NaN NaN NaN 85.85 0.85947 85.85 85.497 86.357 -7.6294E-06 0 0 0 0.0017642 2 51472 68.355 43.501 1 NaN NaN 0 15456000 0 15456000 12076 1873 4595 4717 18859;18860 18859 FVVLETGGEAGITR 14 0 1 Unmodified _FVVLETGGEAGITR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.8912 2 724.890823 1447.76709 NaN NaN NaN -1.4833 -0.0010752 NaN NaN NaN NaN 85.85 0.75487 85.85 85.544 86.299 0 0 0 0 0.00019514 1 51580 101.95 79.313 1 NaN NaN 0 12867000 12867000 0 12077 1873 4595 4717 18861 18861 FVVLETGGEAGITR 14 0 1 Unmodified _FVVLETGGEAGITR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.8956 2 724.890823 1447.76709 71489.8 0.74144 0.00053747 -0.36714 -0.00026614 0.3743 0.00027133 724.88964708961 729.895187775635 84.812 0.7925 84.812 84.531 85.324 0 300 67 7 0 0 0 9.4858E-05 3 52047 86.114 70.575 1 1.2495 1.4099 0 46981000 21456000 25525000 12078 1873 4595 4717 18862;18863;18864 18862 FVVLETGGEAGITR 14 0 1 Unmodified _FVVLETGGEAGITR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.3975 2 724.890823 1447.76709 72667.83 0.71688 0.00051966 0.71621 0.00051917 1.4331 0.0010388 724.890737381903 730.397826547705 98.078 1.2546 98.078 97.698 98.953 0 215 82 6 0 0 0 0.003354 1 55263 47.288 32.621 1 1.9138 1.6197 0 4961900 1752200 3209700 12079 1873 4595 4717 18865 18865 FVVLETGGEAGITR 14 0 1 Unmodified _FVVLETGGEAGITR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.8951 2 724.890823 1447.76709 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.955 1 97.955 97.455 98.455 0 0 0 0 0.014348 1 54369 48.004 28.733 1 12080 1873 4595 4717 18866 18866 FVVQNVSAQK 10 1 0 Unmodified _FVVQNVSAQK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.3187 2 560.31148 1118.60841 NaN NaN NaN 0.34964 0.00019591 NaN NaN NaN NaN 41.791 0.39128 41.791 41.58 41.971 0 0 0 0 0.0001382 1 22016 93.178 84.415 1 NaN NaN 0 21052000 0 21052000 12081 390 4596 4718 18867 18867 FVVQNVSAQK 10 1 0 Unmodified _FVVQNVSAQK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.3122 2 560.31148 1118.60841 79993.54 0.67679 0.00037921 0.83815 0.00046962 1.5149 0.00084884 560.311678208937 564.319086123726 40.719 0.3341 40.719 40.605 40.939 0 85 22 5 0 0 0 0.0037552 1 21778 63.076 63.076 1 1.6584 1.6812 0 29465000 9908800 19556000 12082 390 4596 4718 18868 18868 FVVQNVSAQK 10 1 0 Unmodified _FVVQNVSAQK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.3205 2 560.31148 1118.60841 80416.06 0.35523 0.00019904 0.96009 0.00053795 1.3153 0.00073699 560.311679563294 564.319520412906 47.897 0.42306 47.897 47.718 48.141 0 81 26 4 0 0 0 0.019072 2 23278 47.198 45.71 1 1.5055 1.2684 0 1930000 571970 1358000 12083 390 4596 4718 18869;18870 18870 FVVQNVSAQK 10 1 0 Unmodified _FVVQNVSAQK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.3194 2 560.31148 1118.60841 86264.85 0.28007 0.00015693 0.44142 0.00024733 0.72149 0.00040426 560.311533937919 564.319083436697 48.205 0.45714 48.205 47.992 48.449 0 99 38 4 0 0 0 0.022046 1 22888 46.001 46.001 1 1.4215 1.219 0 1406900 746920 660010 12084 390 4596 4718 18871 18871 FVVTGSK 7 1 0 Unmodified _FVVTGSK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 369.2131 2 369.213246 736.41194 100552.4 0.082842 3.0586E-05 -0.015565 -5.7467E-06 0.067277 2.484E-05 369.213160601937 373.220214851371 26.714 0.53183 26.714 26.516 27.048 0 135 33 6 0 0 0 0.02738 1 12086 73.616 24.026 1 0.95283 1.0709 0 69935000 34488000 35447000 12085 580 4597 4719 18872 18872 FWDFELVK 8 1 0 Unmodified _FWDFELVK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2863 2 542.279118 1082.54368 83399.17 0.59312 0.00032164 -0.060333 -3.2717E-05 0.53279 0.00028892 542.278947111534 546.286097696148 114.26 0.9073 114.26 113.89 114.79 0 273 65 6 0 0 0 0.024949 1 72271 55.531 47.84 1 0.82248 0.80653 0 22614000 12527000 10088000 12086 1827 4598 4720 18873 18873 FWDFELVK 8 1 0 Unmodified _FWDFELVK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.279 2 542.279118 1082.54368 82658.05 0.45185 0.00024503 -0.037881 -2.0542E-05 0.41397 0.00022449 542.278955009748 546.286076097563 113.6 0.82321 113.6 113.22 114.04 -7.6294E-06 267 59 6 0 0 0 0.0023905 2 73882 100.19 100.19 1 0.79747 0.85356 0 23013000 12694000 10319000 12087 1827 4598 4720 18874;18875 18874 FWESPETVSQLDSVR 15 0 1 Unmodified _FWESPETVSQLDSVR_ 0 0 0 Q58EY4;Q92922;Q05CR1;Q05BW5;F8WE13 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 890.4344 2 890.431041 1778.84753 63307.94 0.67821 0.0006039 1.0844 0.00096559 1.7626 0.0015695 890.933834754649 895.435489818466 97.467 0.50449 97.467 97.207 97.711 7.6294E-06 167 39 6 0 0 0 1.6387E-05 1 60801 88.187 88.187 1 0.71392 0.77337 0 27486000 16210000 11276000 12088 1798 4599 4721 18876 18876 FWETLDR 7 0 1 Unmodified _FWETLDR_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7408 2 483.737617 965.460681 87001.91 -0.017032 -8.2392E-06 0.86015 0.00041609 0.84312 0.00040785 483.737953054885 488.742027832864 69.648 0.52168 69.648 69.254 69.776 0 109 43 4 0 0 0 0.03153 1 40496 66.993 66.993 1 1.6016 1.6206 0 9727700 3130000 6597700 12089 1851 4600 4722 18877 18877 FWETLDR 7 0 1 Unmodified _FWETLDR_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.7415 2 483.737617 965.460681 89592.04 0.46943 0.00022708 0.3716 0.00017976 0.84103 0.00040684 483.738038727832 488.741652403334 68.441 0.68726 68.441 68.03 68.718 0 130 54 4 0 0 0 0.02693 2 40577 74.335 70.912 1 1.3323 1.3168 0 12585000 4328400 8257000 12090 1851 4600 4722 18878;18879 18878 FWEVISDEHGIDPTGSYHGDSDLQLER 27 0 1 Unmodified _FWEVISDEHGIDPTGSYHGDSDLQLER_ 0 0 0 Q13885;B2R6L0;Q9BVA1 Q13885 Q13885 TUBB2A;TUBB2B Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.8599 4 776.357345 3101.40027 68275.71 0.3575 0.00027755 0.34752 0.0002698 0.70502 0.00054735 776.608448219934 779.110297718696 103.45 1.0229 103.45 103.03 104.05 0 625 86 12 0 0 0 0.0038885 1 65568 24.276 1.3884 1 1.2821 1.4506 0 47696000 19732000 27964000 12091 1723 4601 4723 18880 18880 FWEVISDEHGIDPTGTYHGDSDLQLDR 27 0 1 Unmodified _FWEVISDEHGIDPTGTYHGDSDLQLDR_ 0 0 0 Q5JP53;Q5SU16;P07437;B4DY90;Q6LC01;B4DMU8;B4DMJ5 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.1107 4 776.357345 3101.40027 68275.71 0.3575 0.00027755 0.34752 0.0002698 0.70502 0.00054735 776.608448219934 779.110297718696 103.45 1.0229 103.45 103.03 104.05 0 625 86 12 0 0 0 5.3279E-16 1 65477 73.341 25.961 1 1.2821 1.4506 0 47696000 19732000 27964000 12092 1452 4602 4724 18881 18881 FWEVISDEHGIDPTGTYHGDSDLQLDR 27 0 1 Unmodified _FWEVISDEHGIDPTGTYHGDSDLQLDR_ 0 0 0 Q5JP53;Q5SU16;P07437;B4DY90;Q6LC01;B4DMU8;B4DMJ5 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 779.11 4 776.357345 3101.40027 67977.21 1.1016 0.00085526 -0.45452 -0.00035287 0.64711 0.00050239 776.607665170812 779.109541944857 114.28 0.98503 114.28 114 114.99 -7.6294E-06 306 43 11 0 0 0 0.02391 1 66670 22.979 5.8212 1 1.1748 0.97194 0 19657000 9126600 10530000 12093 1452 4602 4724 18882 18882 FWEVISDEHGIDPTGTYHGDSDLQLDR 27 0 1 Unmodified _FWEVISDEHGIDPTGTYHGDSDLQLDR_ 0 0 0 Q5JP53;Q5SU16;P07437;B4DY90;Q6LC01;B4DMU8;B4DMJ5 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 779.1097 4 776.357345 3101.40027 68142.97 0.79173 0.00061466 -0.09177 -7.1247E-05 0.69996 0.00054342 776.607971252002 779.110001438203 114.22 0.85378 114.22 113.95 114.81 -7.6294E-06 272 35 10 0 0 0 7.5002E-06 1 65695 38.374 15.128 1 1.0425 0.87505 0 16930000 7872300 9057900 12094 1452 4602 4724 18883 18883 FWTEVYPGAK 10 1 0 Unmodified _FWTEVYPGAK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.3098 2 599.300581 1196.58661 78433.93 0.87675 0.00052544 1.0401 0.00062332 1.9168 0.0011488 599.801797747698 603.308428227357 81.057 0.61893 81.057 80.73 81.349 0 231 52 5 0 0 0 0.010129 1 49371 53.775 24.399 1 0.89199 0.91085 0 25835000 11230000 14606000 12095 1742 4603 4725 18884 18884 FWTEVYPGAK 10 1 0 Unmodified _FWTEVYPGAK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.3084 2 599.300581 1196.58661 NaN NaN NaN 1.1026 0.00066076 NaN NaN NaN NaN 93.478 0.83138 93.478 93.169 94 0 0 0 0 0.037513 1 51304 50.04 28.512 1 NaN NaN 0 2448200 0 2448200 12096 1742 4603 4725 18885 18885 FWYFVSQLK 9 1 0 Unmodified _FWYFVSQLK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.3297 2 609.321317 1216.62808 NaN NaN NaN 0.56571 0.0003447 NaN NaN NaN NaN 113.68 0.8209 113.68 113.35 114.17 0 0 0 0 0.038052 1 72001 50.878 46.095 1 NaN NaN 0 10863000 0 10863000 12097 1003 4604 4726 18886 18886 FWYFVSQLK 9 1 0 Unmodified _FWYFVSQLK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.3207 2 609.321317 1216.62808 NaN NaN NaN -0.45104 -0.00027483 NaN NaN NaN NaN 112.88 0.81436 112.88 112.6 113.41 -7.6294E-06 0 0 0 0.013094 1 73089 71.223 55.963 1 NaN NaN 0 10014000 10014000 0 12098 1003 4604 4726 18887 18887 FYALDPSFPR 10 0 1 Unmodified _FYALDPSFPR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.8093 2 606.806031 1211.59751 78944.84 0.53731 0.00032604 -1.1629 -0.00070563 -0.62554 -0.00037958 606.805193052388 611.80883472286 111.8 0.6115 111.8 111.56 112.17 0 127 34 6 0 0 0 0.0048352 1 63936 60.973 57.134 1 0.91153 0.7784 0 4525800 1913600 2612300 12099 1694 4605 4727 18888 18888 FYALSASFEPFSNK 14 1 0 Unmodified _FYALSASFEPFSNK_ 0 0 0 B4DHR1;Q53G71;V9HW88;P27797 B4DHR1 B4DHR1 HEL-S-99n;CALR Calreticulin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 804.8917 2 804.390656 1606.76676 NaN NaN NaN 0.5962 0.00047958 NaN NaN NaN NaN 123.27 0.38744 123.27 123.07 123.46 0 0 0 0 0.0090957 1 72805 52.693 42.739 1 NaN NaN 0 2433600 2433600 0 12100 978 4606 4728 18889 18889 FYDDAIVSQK 10 1 0 Unmodified _FYDDAIVSQK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.3001 2 593.292953 1184.57135 79068.18 0.37855 0.00022459 0.31244 0.00018537 0.69099 0.00040996 593.292803684818 597.300578629408 58.443 0.83101 58.443 57.844 58.675 3.8147E-06 231 66 5 0 0 0 6.0391E-08 1 33148 113.74 98.078 1 0.85099 0.91543 0 32998000 16927000 16070000 12101 1411 4607 4729 18890 18890 FYDDAIVSQK 10 1 0 Unmodified _FYDDAIVSQK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.2932 2 593.292953 1184.57135 79238.52 0.63775 0.00037838 0.29885 0.00017731 0.93661 0.00055568 593.2928745762 597.300491535882 57.437 0.72964 57.437 56.931 57.661 0 247 56 7 0 0 0 0.00093728 2 33140 78.816 78.816 1 0.83157 0.93192 0 80378000 41861000 38517000 12102 1411 4607 4729 18891;18892 18891 FYEAFSK 7 1 0 Unmodified _FYEAFSK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF4 B4DMA2 B4DMA2 HSP90AB1;HSP90Bf Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.2226 2 446.215986 890.417419 90822.4 0.24083 0.00010746 0.0067169 2.9972E-06 0.24755 0.00011046 446.215977620729 450.222959177079 49.264 0.91488 49.264 48.894 49.809 0 306 63 8 0 0 0 0.025144 2 26902 89.369 57.256 1 2.3556 2.7506 0 275170000 87111000 188060000 12103 379 4608 4730 18893;18894 18893 FYEDNGQLDDAR 12 0 1 Unmodified _FYEDNGQLDDAR_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.8184 2 721.81277 1441.61099 76325.41 1.0358 0.00074765 0.81256 0.00058652 1.8484 0.0013342 722.315742737602 726.817183851929 44.363 0.30815 44.363 44.24 44.548 0 43 26 4 0 0 0 0.00023251 1 23781 85.355 79.574 1 2.1829 2.273 0 5248600 1791800 3456800 12104 1838 4609 4731 18895 18895 FYEDNGQLDDAR 12 0 1 Unmodified _FYEDNGQLDDAR_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.8167 2 721.81277 1441.61099 76868.98 0.75848 0.00054748 -0.0066679 -4.813E-06 0.75181 0.00054267 721.812380471731 726.816726387858 43.544 0.40342 43.544 43.37 43.774 0 61 30 5 0 0 0 0.00019323 1 23693 77.379 68.466 1 1.4416 1.4321 0 8691900 3926800 4765000 12105 1838 4609 4731 18896 18896 FYEEVHDLER 10 0 1 Unmodified _FYEEVHDLER_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;E9PKT8;C9J6D1;A8MXH2;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VY35;A8MXH2 F8VY35 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.8163 2 668.812042 1335.60953 74506.99 0.34166 0.0002285 0.13737 9.1873E-05 0.47902 0.00032038 668.812509828265 673.816118675332 50.445 0.50502 50.445 50.175 50.68 0 177 48 8 0 0 0 1.4432E-06 1 27788 111.65 102.29 1 1.1096 1.2696 0 128740000 53264000 75472000 12106 332;359 4610 4732 18897 18897 FYEEVHDLER 10 0 1 Unmodified _FYEEVHDLER_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;E9PKT8;C9J6D1;A8MXH2;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VY35;A8MXH2 F8VY35 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.8171 2 668.812042 1335.60953 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.871 1 50.871 50.371 51.371 0 0 0 0 0.00022517 1 28117 78.655 45.815 1 12107 332;359 4610 4732 18898 18898 FYEEVHDLER 10 0 1 Unmodified _FYEEVHDLER_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;E9PKT8;C9J6D1;A8MXH2;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VY35;A8MXH2 F8VY35 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.8169 2 668.812042 1335.60953 75128.09 0.51545 0.00034474 -0.0069069 -4.6194E-06 0.50855 0.00034012 668.812241184236 673.816247888236 48.813 0.65885 48.813 48.568 49.227 0 206 53 6 0 0 0 5.4193E-06 1 27302 108.67 97.859 1 1.0265 1.1745 0 162170000 83528000 78640000 12108 332;359 4610 4732 18899 18899 FYEEVHDLER 10 0 1 Unmodified _FYEEVHDLER_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;E9PKT8;C9J6D1;A8MXH2;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VY35;A8MXH2 F8VY35 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.5462 3 446.210453 1335.60953 90066.07 0.012743 5.6861E-06 0.53223 0.00023749 0.54497 0.00024317 446.210935070853 449.546572576605 48.839 1.0133 48.839 48.529 49.542 -3.8147E-06 397 84 8 0 0 0 0.00051063 1 27309 63.408 59.729 1 1.0032 1.1588 0 250960000 117820000 133140000 12109 332;359 4610 4732 18900 18900 FYEEVHDLER 10 0 1 Unmodified _FYEEVHDLER_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;E9PKT8;C9J6D1;A8MXH2;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VY35;A8MXH2 F8VY35 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 449.5465 3 446.210453 1335.60953 90565.36 0.11737 5.237E-05 0.31259 0.00013948 0.42996 0.00019185 446.210811908206 449.546521082569 57.853 1.5089 57.853 57.556 59.065 0 524 115 9 0 0 0 0.00092927 1 29279 58.676 52.834 1 1.4179 1.1584 0 15828000 6442900 9385600 12110 332;359 4610 4732 18901 18901 FYEEVHDLER 10 0 1 Unmodified _FYEEVHDLER_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;E9PKT8;C9J6D1;A8MXH2;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VY35;A8MXH2 F8VY35 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.8171 2 668.812042 1335.60953 73827.73 0.62272 0.00041648 0.11059 7.3962E-05 0.7333 0.00049044 668.812220272037 673.81631778015 57.866 1.1024 57.866 57.575 58.677 3.8147E-06 399 82 7 0 0 0 0.00072198 1 29536 82.287 75.392 1 1.4303 1.1691 0 13912000 5495800 8415800 12111 332;359 4610 4732 18902 18902 FYEEVHDLER 10 0 1 Unmodified _FYEEVHDLER_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;E9PKT8;C9J6D1;A8MXH2;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VY35;A8MXH2 F8VY35 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.8166 2 668.812042 1335.60953 75124.68 0.50509 0.00033781 0.1163 7.7783E-05 0.62139 0.0004156 668.812124997253 673.81635378407 58.351 1.3478 58.351 58.002 59.35 0 437 104 6 0 0 0 0.024874 1 29227 44.863 40.565 1 1.3532 1.111 0 13782000 5579600 8202800 12112 332;359 4610 4732 18903 18903 FYEEVHDLER 10 0 1 Unmodified _FYEEVHDLER_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;E9PKT8;C9J6D1;A8MXH2;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VY35;A8MXH2 F8VY35 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 449.5468 3 446.210453 1335.60953 90113.48 0.030638 1.3671E-05 0.12342 5.5072E-05 0.15406 6.8743E-05 446.210490722538 449.546498256968 58.339 2.122 58.339 57.971 60.093 3.8147E-06 644 162 8 0 0 0 0.048755 1 29463 25.474 22.436 1 1.4363 1.1822 0 14107000 6027600 8079800 12113 332;359 4610 4732 18904 18904 FYEQMNGPVAGASR 14 0 1 Oxidation (M) _FYEQM(ox)NGPVAGASR_ FYEQM(1)NGPVAGASR FYEQM(77.74)NGPVAGASR 0 1 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;Q9BW34;A0A087X1X7;Q71RH4;Q9H7G6;E9PQ49;E9PI39;E9PQZ1;E9PMW7;E9PIZ1;E9PPR1;E9PL12;E9PL71;H0YCK7;E9PN91;E9PKK3;E9PK72;E9PK06 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.8593 2 771.853915 1541.69328 NaN NaN NaN 0.98163 0.00075767 NaN NaN NaN NaN 36.599 0.31504 36.599 36.472 36.787 0 0 0 0 0.00019949 1 18838 77.74 58.469 1 NaN NaN 0 3691400 0 3691400 12114 875 4611 4733 18905 18905 681 FYFENLLSK 9 1 0 Unmodified _FYFENLLSK_ 0 0 0 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;H0Y6G2;Q8WU40;Q13280 Q5SWX3 Q5SWX3 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.8032 2 580.802957 1159.59136 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.88 1 110.88 110.38 111.38 0 0 0 0 0.0033771 1 69706 71.379 42.867 1 12115 475 4612 4734 18906 18906 FYFENLLSK 9 1 0 Unmodified _FYFENLLSK_ 0 0 0 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;H0Y6G2;Q8WU40;Q13280 Q5SWX3 Q5SWX3 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8102 2 580.802957 1159.59136 NaN NaN NaN -0.23329 -0.0001355 NaN NaN NaN NaN 110.24 0.32533 110.24 110.04 110.36 0 0 0 0 0.029937 1 70941 53.493 15.255 1 NaN NaN 0 4384700 0 4384700 12116 475 4612 4734 18907 18907 FYFENLLSK 9 1 0 Unmodified _FYFENLLSK_ 0 0 0 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;H0Y6G2;Q8WU40;Q13280 Q5SWX3 Q5SWX3 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.803 2 580.802957 1159.59136 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.15 1 110.15 109.65 110.65 -7.6294E-06 0 0 0 0.050344 1 70872 46.462 27.731 1 12117 475 4612 4734 18908 18908 FYFLEAYNAK 10 1 0 Unmodified _FYFLEAYNAK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8221 2 633.313689 1264.61282 79265.88 0.51197 0.00032424 0.038435 2.4341E-05 0.55041 0.00034858 633.313129130637 637.320754489935 99.672 0.70506 99.672 99.462 100.17 0 155 59 5 0 0 0 0.0016938 1 61099 72.485 47.562 1 0.67714 0.68642 0 6642900 4451300 2191600 12118 222 4613 4735 18909 18909 FYFLEAYNAK 10 1 0 Unmodified _FYFLEAYNAK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.3207 2 633.313689 1264.61282 79258.48 0.6707 0.00042477 -0.020174 -1.2777E-05 0.65053 0.00041199 633.313185033112 637.32100163487 98.826 0.64589 98.826 98.517 99.162 0 154 52 6 0 0 0 0.00076493 3 61932 81.594 51.785 1 0.5891 0.61362 0 10008000 6066000 3941600 12119 222 4613 4735 18910;18911;18912 18912 FYFLEAYNAK 10 1 0 Unmodified _FYFLEAYNAK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.3151 2 633.313689 1264.61282 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.115 1 99.115 98.615 99.615 -7.6294E-06 0 0 0 0.0066261 1 62088 61.962 41.061 1 12120 222 4613 4735 18913 18913 FYGELALK 8 1 0 Unmodified _FYGELALK_ 0 0 0 P78527;B4DL41;F5GX40 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.7676 2 470.760561 939.506569 88132.36 -0.038656 -1.8198E-05 0.43011 0.00020248 0.39146 0.00018428 470.760577925446 474.767757762833 76.137 0.98479 76.137 75.624 76.609 0 360 85 6 0 0 0 0.024726 1 45831 55.676 22.318 1 0.68358 0.70827 0 33266000 19261000 14005000 12121 1665 4614 4736 18914 18914 FYGPEGPYGVFAGR 14 0 1 Unmodified _FYGPEGPYGVFAGR_ 0 0 0 Q6IB11;O00264 Q6IB11 Q6IB11 PGRMC1 Membrane-associated progesterone receptor component 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.8716 2 758.864608 1515.71466 70928.66 0.72514 0.00055028 -0.18733 -0.00014216 0.53781 0.00040812 758.864508063912 764.369822058761 97.95 0.64229 97.95 97.636 98.279 0 132 52 4 0 0 0 0.00021928 2 59823 66.595 60.212 1 1.3223 1.3854 0 10931000 4672100 6258600 12122 1361 4615 4737 18915;18916 18915 FYGPEGPYGVFAGR 14 0 1 Unmodified _FYGPEGPYGVFAGR_ 0 0 0 Q6IB11;O00264 Q6IB11 Q6IB11 PGRMC1 Membrane-associated progesterone receptor component 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.8655 2 758.864608 1515.71466 NaN NaN NaN -0.44978 -0.00034132 NaN NaN NaN NaN 97.201 0.69394 97.201 96.828 97.522 0 0 0 0 0.014035 1 60897 49.35 33.126 1 NaN NaN 0 7312600 0 7312600 12123 1361 4615 4737 18917 18917 FYHEACVK 8 1 0 Unmodified _FYHEACVK_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.2523 2 527.244752 1052.47495 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.718 1 21.718 21.218 22.218 0 0 0 0 0.0052682 1 7942 85.212 63.912 1 12124 1435 4616 4738 18918 18918 FYHEACVK 8 1 0 Unmodified _FYHEACVK_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.2454 2 527.244752 1052.47495 NaN NaN NaN 0.34441 0.00018159 NaN NaN NaN NaN 21.252 0.2187 21.252 21.163 21.382 0 0 0 0 0.023558 1 7454 63.21 55.498 1 NaN NaN 0 8893000 8893000 0 12125 1435 4616 4738 18919 18919 FYHEACVK 8 1 0 Unmodified _FYHEACVK_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.2519 2 527.244752 1052.47495 83414.28 0.21794 0.00011491 -0.0022913 -1.2081E-06 0.21564 0.0001137 527.244819613444 531.251707281641 23.302 0.39922 23.302 23.125 23.524 0 74 17 6 0 0 0 0.024726 1 7342 55.676 47.336 1 1.662 1.3502 0 2905000 1000900 1904100 12126 1435 4616 4738 18920 18920 FYHLAK 6 1 0 Unmodified _FYHLAK_ 0 0 0 Q8IY81;J3KS36;J3QSE2;J3QRS5;J3QR05;J3KS74 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.7159 2 389.715956 777.41736 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.154 1 26.154 25.654 26.654 0 0 0 0 0.050279 1 11631 74.417 0 1 12127 1898 4617 4739 18921 18921 FYLDTVSALNFAAR 14 0 1 Unmodified _FYLDTVSALNFAAR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.4179 2 794.411923 1586.80929 68228.16 1.0725 0.00085198 -0.12617 -0.00010023 0.9463 0.00075175 794.411664306838 799.415950564151 119.38 0.6642 119.38 119.14 119.8 0 201 44 6 0 0 0 0.00013987 2 76721 97.456 97.456 1 0.87476 0.90339 0 20081000 9904200 10177000 12128 1745 4618 4740 18922;18923 18923 FYLDTVSALNFAAR 14 0 1 Unmodified _FYLDTVSALNFAAR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.4122 2 794.411923 1586.80929 67963.08 0.81961 0.00065111 -0.097531 -7.748E-05 0.72208 0.00057363 794.411544305792 799.415960741147 118.92 0.7564 118.92 118.66 119.42 7.6294E-06 205 49 7 0 0 0 2.7644E-06 2 78197 104.52 99.629 1 0.83272 0.87002 0 22529000 11462000 11068000 12129 1745 4618 4740 18924;18925 18924 FYLDTVSALNFAAR 14 0 1 Unmodified _FYLDTVSALNFAAR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 799.4164 2 794.411923 1586.80929 67859.7 0.66491 0.00052822 -0.25251 -0.00020059 0.41241 0.00032762 794.411816317762 799.41597020566 131.4 0.86211 131.4 131.13 132 0 179 40 9 0 0 0 0.0002145 2 79682 81.865 78.44 1 1.5426 1.2819 0 10886000 4416000 6470500 12130 1745 4618 4740 18926;18927 18926 FYLDTVSALNFAAR 14 0 1 Unmodified _FYLDTVSALNFAAR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.4169 2 794.411923 1586.80929 67931.81 0.96002 0.00076265 -0.3525 -0.00028003 0.60752 0.00048262 794.912402528784 799.415994473314 131.21 0.69246 131.21 130.96 131.65 0 153 29 8 0 0 0 5.5936E-10 3 78656 157.78 157.78 1 1.4185 1.1458 0 10789000 4558200 6230600 12131 1745 4618 4740 18928;18929;18930 18929 FYLGGPTSIR 10 0 1 Unmodified _FYLGGPTSIR_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.8022 2 555.800749 1109.58694 NaN NaN NaN 1.5461 0.00085933 NaN NaN NaN NaN 81.377 0.5407 81.377 81.113 81.654 0 0 0 0 0.0067484 1 48492 66.692 55.47 1 NaN NaN 0 8395600 8395600 0 12132 2147 4619 4741 18931 18931 FYLGGPTSIR 10 0 1 Unmodified _FYLGGPTSIR_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.8008 2 555.800749 1109.58694 NaN NaN NaN 0.17943 9.9726E-05 NaN NaN NaN NaN 80.065 0.5372 80.065 79.879 80.416 0 0 0 0 0.048381 1 48794 47.198 35.131 1 NaN NaN 0 5271900 5271900 0 12133 2147 4619 4741 18932 18932 FYNELTEILVR 11 0 1 Unmodified _FYNELTEILVR_ 0 0 0 B7Z5C1;B4DHD2;Q4W4Y1;Q8WUM4 B7Z5C1 B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.8818 2 698.877185 1395.73982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.17 1 117.17 116.67 117.67 7.6294E-06 0 0 0 0.043067 1 74954 44.309 24.523 1 12134 974 4620 4742 18933 18933 FYNELTEILVR 11 0 1 Unmodified _FYNELTEILVR_ 0 0 0 B7Z5C1;B4DHD2;Q4W4Y1;Q8WUM4 B7Z5C1 B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.8816 2 698.877185 1395.73982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.18 1 117.18 116.68 117.68 7.6294E-06 0 0 0 0.043067 1 74961 44.309 33.158 1 12135 974 4620 4742 18934 18934 FYNLVLLPR 9 0 1 Unmodified _FYNLVLLPR_ 0 0 0 Q13895;H7BY94 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.8376 2 567.837134 1133.65972 80941.73 0.90916 0.00051625 -0.1245 -7.0698E-05 0.78465 0.00044556 567.83703250211 572.841126042008 113.42 0.8275 113.42 113.1 113.93 7.6294E-06 292 60 6 0 0 0 8.7466E-06 2 71788 128.57 128.57 1 1.1527 1.1875 0 24608000 12014000 12594000 12136 1724 4621 4743 18935;18936 18936 FYNLVLLPR 9 0 1 Unmodified _FYNLVLLPR_ 0 0 0 Q13895;H7BY94 Q13895 Q13895 BYSL Bystin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.8416 2 567.837134 1133.65972 NaN NaN NaN 0.8329 0.00047295 NaN NaN NaN NaN 114 0.11411 114 113.93 114.04 0 0 0 0 0.051865 1 72289 46.426 35.958 1 NaN NaN 0 924910 0 924910 12137 1724 4621 4743 18937 18937 FYNLVLLPR 9 0 1 Unmodified _FYNLVLLPR_ 0 0 0 Q13895;H7BY94 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.8369 2 567.837134 1133.65972 80665.62 0.75183 0.00042692 0.082039 4.6585E-05 0.83387 0.0004735 567.837090224484 572.841275597776 112.69 0.92764 112.69 112.38 113.31 -7.6294E-06 267 63 7 0 0 0 2.0477E-06 2 73088 135.84 135.84 1 1.1012 1.2062 0 31651000 15394000 16258000 12138 1724 4621 4743 18938;18939 18939 FYNLVLLPR 9 0 1 Unmodified _FYNLVLLPR_ 0 0 0 Q13895;H7BY94 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.8373 2 567.837134 1133.65972 80785.25 0.69936 0.00039712 0.17948 0.00010191 0.87883 0.00049903 567.837097340535 572.841434952727 124.58 1.252 124.58 124.21 125.46 -7.6294E-06 177 52 7 0 0 0 2.4008E-05 2 74677 114.78 114.78 1 1.0602 0.90067 0 9169500 4410900 4758600 12139 1724 4621 4743 18940;18941 18941 FYNLVLLPR 9 0 1 Unmodified _FYNLVLLPR_ 0 0 0 Q13895;H7BY94 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.8416 2 567.837134 1133.65972 80217.13 0.64724 0.00036753 0.055139 3.131E-05 0.70238 0.00039884 567.836986479554 572.841240675296 124.37 0.71025 124.37 124.1 124.81 0 147 31 7 0 0 0 7.9814E-06 2 73517 129.4 129.4 1 0.96871 0.80446 0 7682100 3548000 4134100 12140 1724 4621 4743 18942;18943 18942 FYNNVQGLVPK 11 1 0 Unmodified _FYNNVQGLVPK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.8465 2 639.845687 1277.67682 76256.73 0.49263 0.00031521 -0.20083 -0.0001285 0.2918 0.00018671 639.846103993667 643.852530087751 81.574 0.99402 81.574 81.204 82.198 0 360 86 7 0 0 0 6.5947E-08 1 48510 114.89 114.89 1 1.0875 1.2249 0 74388000 38305000 36083000 12141 1741 4622 4744 18944 18944 FYNNVQGLVPK 11 1 0 Unmodified _FYNNVQGLVPK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8468 2 639.845687 1277.67682 76435.85 0.55795 0.00035701 0.045851 2.9338E-05 0.60381 0.00038634 639.845835975993 643.852592086744 80.502 0.97181 80.502 80.15 81.122 0 307 80 6 0 0 0 8.0434E-10 2 48920 125.31 115.53 1 1.0814 1.2006 0 49103000 22142000 26961000 12142 1741 4622 4744 18945;18946 18945 FYNNVQGLVPK 11 1 0 Unmodified _FYNNVQGLVPK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.8535 2 639.845687 1277.67682 76552.81 0.63074 0.00040358 -0.013355 -8.5452E-06 0.61739 0.00039503 639.845894405234 643.852677370157 93.522 1.3917 93.522 92.918 94.309 -7.6294E-06 373 90 8 0 0 0 0.00029202 1 52238 88.819 88.819 1 1.3902 1.0829 0 12297000 4889000 7407600 12143 1741 4622 4744 18947 18947 FYNNVQGLVPK 11 1 0 Unmodified _FYNNVQGLVPK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.8525 2 639.845687 1277.67682 76087.69 0.54608 0.00034941 -0.2154 -0.00013782 0.33068 0.00021158 639.845668122548 643.852610565622 93.405 1.0365 93.405 92.949 93.985 0 307 67 8 0 0 0 0.0019715 2 51302 63.419 63.419 1 1.3114 1.0827 0 11377000 4515000 6861800 12144 1741 4622 4744 18948;18949 18949 FYPAEWQDFLDSLQK 15 1 0 Unmodified _FYPAEWQDFLDSLQK_ 0 0 0 Q9Y3C1 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 948.4614 2 943.951609 1885.88867 62977.89 0.79541 0.00075083 0.1268 0.00011969 0.92221 0.00087053 944.452923711416 948.460325251044 131.95 0.70439 131.95 131.65 132.36 0 225 46 8 0 0 0 4.5278E-07 2 86131 103.43 103.43 1 0.7576 0.77695 0 17600000 8446400 9153800 12145 2135 4623 4745 18950;18951 18951 FYPAEWQDFLDSLQK 15 1 0 Unmodified _FYPAEWQDFLDSLQK_ 0 0 0 Q9Y3C1 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.9609 2 943.951609 1885.88867 62500.99 1.0241 0.00096665 -0.27604 -0.00026056 0.74801 0.00070609 944.45222796788 947.958475036079 131.49 0.66298 131.49 131.21 131.87 0 287 50 8 0 0 0 0.00022595 2 87878 72.958 72.958 1 0.74665 0.75507 0 26698000 14386000 12312000 12146 2135 4623 4745 18952;18953 18953 FYPLEIDYGQDEEAVK 16 1 0 Unmodified _FYPLEIDYGQDEEAVK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 962.9602 2 958.451639 1914.88872 61922.85 0.60843 0.00058315 0.26316 0.00025223 0.87159 0.00083538 958.953549065372 962.458847884163 106.44 1.0443 106.44 106.01 107.05 0 439 76 10 0 0 0 4.0441E-05 1 66114 110.31 106.63 1 0.70382 0.79243 0 117630000 73087000 44546000 12147 139 4624 4746 18954 18954 FYPLEIDYGQDEEAVK 16 1 0 Unmodified _FYPLEIDYGQDEEAVK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 962.459 2 958.451639 1914.88872 62586.11 0.66457 0.00063696 0.45676 0.00043778 1.1213 0.0010747 958.953724030643 962.459242387462 105.83 1.407 105.83 105.14 106.55 0 490 103 10 0 0 0 7.0649E-25 1 67168 180.2 180.2 1 0.67624 0.76333 0 127940000 76399000 51537000 12148 139 4624 4746 18955 18955 FYPLEIDYGQDEEAVK 16 1 0 Unmodified _FYPLEIDYGQDEEAVK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 958.9532 2 958.451639 1914.88872 61025.54 0.3402 0.00032607 0.6142 0.00058868 0.9544 0.00091475 958.953585524708 962.960477200171 117.56 1.7313 117.56 117 118.73 7.6294E-06 355 76 10 0 0 0 0.00015321 2 69193 67.519 67.519 1 1.1709 0.98299 0 52910000 24439000 28472000 12149 139 4624 4746 18956;18957 18957 FYPLEIDYGQDEEAVK 16 1 0 Unmodified _FYPLEIDYGQDEEAVK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 962.9602 2 958.451639 1914.88872 61538.36 0.18817 0.00018035 0.40832 0.00039136 0.59649 0.00057171 958.953700832488 962.458788848789 117.42 1.4161 117.42 117.07 118.48 0 397 66 10 0 0 0 0.00065469 2 68168 60.628 60.628 1 1.1746 0.98778 0 51036000 22487000 28550000 12150 139 4624 4746 18958;18959 18958 FYPLEIDYGQDEEAVKK 17 2 0 Unmodified _FYPLEIDYGQDEEAVKK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.6805 3 682.001839 2042.98369 73102.45 0.89419 0.00060984 0.75486 0.00051481 1.649 0.0011247 682.335958750919 687.344972247218 91.417 0.73679 91.417 90.972 91.709 0 323 59 9 0 0 0 0.00052722 1 55164 43.297 43.297 1 0.74409 0.8785 0 48336000 25528000 22808000 12151 139 4625 4747 18960 18960 FYPLEIDYGQDEEAVKK 17 2 0 Unmodified _FYPLEIDYGQDEEAVKK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.6795 3 682.001839 2042.98369 73001.5 1.1258 0.00076781 1.2539 0.00085518 2.3797 0.001623 682.335980307728 687.680243100951 90.395 0.74466 90.395 90.051 90.796 0 389 62 10 0 0 0 0.00095975 2 55755 27.271 22.571 1 0.80488 0.93289 0 65300000 33781000 31519000 12152 139 4625 4747 18961;18962 18962 FYPLEIDYGQDEEAVKK 17 2 0 Unmodified _FYPLEIDYGQDEEAVKK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.3359 3 682.001839 2042.98369 72886.05 0.6094 0.00041561 -0.097205 -6.6294E-05 0.51219 0.00034932 682.33587136839 687.344411094811 104.12 0.66602 104.12 103.8 104.47 7.6294E-06 306 44 10 0 0 0 0.039607 2 59163 14.695 14.695 1 1.1323 0.9665 0 16249000 7144500 9104100 12153 139 4625 4747 18963;18964 18963 FYPLEIDYGQDEEAVKK 17 2 0 Unmodified _FYPLEIDYGQDEEAVKK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.3376 3 682.001839 2042.98369 72812.94 0.41988 0.00028636 0.10955 7.4714E-05 0.52943 0.00036107 682.001795445119 687.679254128627 103.9 0.66991 103.9 103.49 104.16 0 276 44 10 0 0 0 0.038797 1 58137 14.922 13.145 1 1.1278 0.95514 0 16240000 7846800 8393600 12154 139 4625 4747 18965 18965 FYQEPNGETPSSLYR 15 0 1 Unmodified _FYQEPNGETPSSLYR_ 0 0 0 Q8NI27;A0A0C4DG98;B4DKZ6 Q8NI27 Q8NI27 THOC2 THO complex subunit 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.415 2 894.415391 1786.81623 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.087 1 69.087 68.587 69.587 0 0 0 0 0.0053444 1 40089 52.928 46.696 1 12155 1929 4626 4748 18966 18966 FYQGFLFSEKPEK 13 2 0 Unmodified _FYQGFLFSEKPEK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.4244 2 810.408849 1618.80314 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.868 1 84.868 84.368 85.368 0 0 0 0 0.0046324 1 50920 74.944 62.368 1 12156 1665 4627 4749 18967 18967 FYQGFLFSEKPEK 13 2 0 Unmodified _FYQGFLFSEKPEK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.364 2 810.408849 1618.80314 66656.06 0.96284 0.00078029 -0.22827 -0.000185 0.73457 0.0005953 810.408392732157 818.924369952448 85.119 0.55057 85.119 84.736 85.286 0 105 45 6 0 0 0 0.00092765 1 50979 79.693 71.18 1 0.45194 0.5394 0 19825000 12981000 6843300 12157 1665 4627 4749 18968 18968 FYQGFLFSEKPEK 13 2 0 Unmodified _FYQGFLFSEKPEK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.6082 3 540.608325 1618.80314 82288.6 0.8307 0.00044908 -0.0751 -4.06E-05 0.7556 0.00040848 540.608188772223 546.285471494537 83.472 0.79831 83.472 83.158 83.957 0 283 62 7 0 0 0 0.00056789 2 51062 62.042 62.042 1 0.57316 0.6633 0 44458000 26194000 18264000 12158 1665 4627 4749 18969;18970 18970 FYQGFLFSEKPEK 13 2 0 Unmodified _FYQGFLFSEKPEK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.4119 2 810.408849 1618.80314 NaN NaN NaN 0.7181 0.00058196 NaN NaN NaN NaN 83.52 0.46764 83.52 83.286 83.754 0 0 0 0 7.3836E-05 1 51143 94.616 88.771 1 NaN NaN 0 16847000 16847000 0 12159 1665 4627 4749 18971 18971 FYQGFLFSEKPEK 13 2 0 Unmodified _FYQGFLFSEKPEK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.6083 3 540.608325 1618.80314 81730.69 0.86086 0.00046539 -0.30803 -0.00016652 0.55283 0.00029887 540.608056502448 545.951115421992 96.485 0.56435 96.485 96.294 96.858 0 178 33 9 0 0 0 0.018446 1 54097 24.935 24.935 1 0.33393 0.28585 0 9337400 7408700 1928800 12160 1665 4627 4749 18972 18972 FYQGFLFSEKPEK 13 2 0 Unmodified _FYQGFLFSEKPEK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 810.9193 2 810.408849 1618.80314 66704.55 0.8721 0.00070676 0.98385 0.00079732 1.856 0.0015041 810.408660402421 818.423663202652 96.505 0.58909 96.505 96.208 96.798 7.6294E-06 162 35 7 0 0 0 0.014553 1 54109 52.693 44.18 1 0.28856 0.24699 0 9433300 6710300 2723000 12161 1665 4627 4749 18973 18973 FYQGFLFSEKPEK 13 2 0 Unmodified _FYQGFLFSEKPEK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.6088 3 540.608325 1618.80314 82567.02 0.42018 0.00022715 0.050912 2.7523E-05 0.47109 0.00025468 540.608256267137 545.951264013332 96.251 0.44469 96.251 96.058 96.503 -7.6294E-06 157 26 9 0 0 0 0.047115 1 53122 17.506 17.506 1 0.31488 0.26573 0 8891600 6779700 2111900 12162 1665 4627 4749 18974 18974 FYQGFLFSEKPEK 13 2 0 Unmodified _FYQGFLFSEKPEK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 810.4084 2 810.408849 1618.80314 66985.59 0.46078 0.00037342 1.6354 0.0013254 2.0962 0.0016988 810.912057628066 818.423389474703 96.236 0.54102 96.236 95.962 96.503 0 148 33 7 0 0 0 0.0029786 1 53137 61.435 55.593 1 0.31556 0.26619 0 8261300 6080500 2180800 12163 1665 4627 4749 18975 18975 FYQVPVPLPDRR 12 0 2 Unmodified _FYQVPVPLPDRR_ 0 0 1 A0A024R8L0;J3QLS3;Q9Y2R9;J3KSI8;J3QQS1 A0A024R8L0 A0A024R8L0 MRPS7 28S ribosomal protein S7, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.61 3 496.277021 1485.80923 NaN NaN NaN -1.7832 -0.00088496 NaN NaN NaN NaN 88.088 0.11694 88.088 88.032 88.149 0 0 0 0 0.018204 1 53112 36.32 30.601 1 NaN NaN 0 3852400 3852400 0 12164 250 4628 4750 18976 18976 FYQVPVPLPDRR 12 0 2 Unmodified _FYQVPVPLPDRR_ 0 0 1 A0A024R8L0;J3QLS3;Q9Y2R9;J3KSI8;J3QQS1 A0A024R8L0 A0A024R8L0 MRPS7 28S ribosomal protein S7, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.9486 3 496.277021 1485.80923 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.94 1 87.94 87.44 88.44 0 0 0 0 0.014762 1 53027 44.612 31.985 1 12165 250 4628 4750 18977 18977 FYQVPVPLPDRR 12 0 2 Unmodified _FYQVPVPLPDRR_ 0 0 1 A0A024R8L0;J3QLS3;Q9Y2R9;J3KSI8;J3QQS1 A0A024R8L0 A0A024R8L0 MRPS7 28S ribosomal protein S7, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.949 3 496.277021 1485.80923 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.32 1 88.32 87.82 88.82 0 0 0 0 0.041099 1 53250 37.426 22.224 1 12166 250 4628 4750 18978 18978 FYQVPVPLPDRR 12 0 2 Unmodified _FYQVPVPLPDRR_ 0 0 1 A0A024R8L0;J3QLS3;Q9Y2R9;J3KSI8;J3QQS1 A0A024R8L0 A0A024R8L0 MRPS7 28S ribosomal protein S7, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.949 3 496.277021 1485.80923 NaN NaN NaN -0.8072 -0.00040059 NaN NaN NaN NaN 86.824 0.34106 86.824 86.625 86.966 7.6294E-06 0 0 0 0.010119 1 53437 44.543 24.802 1 NaN NaN 0 5691400 0 5691400 12167 250 4628 4750 18979 18979 FYSFLVLK 8 1 0 Unmodified _FYSFLVLK_ 0 0 0 A0A024R9J0;O60216;E5RFZ5;B3KUT8;E5RG18;E5RI01;F6KSS9;Q9H4I0 A0A024R9J0 A0A024R9J0 RAD21;RAD21L;RAD21L1 Double-strand-break repair protein rad21 homolog;Double-strand-break repair protein rad21-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.7952 2 508.794404 1015.57425 87512.63 0.75967 0.00038651 -0.46512 -0.00023665 0.29455 0.00014986 508.794072568475 512.801154324972 112.02 0.55727 112.02 111.82 112.37 7.6294E-06 112 42 4 0 0 0 0.024045 1 72352 56.122 46.211 1 0.68746 0.69244 0 7229000 4259500 2969500 12168 280 4629 4751 18980 18980 FYSLPQSPQQFK 12 1 0 Unmodified _FYSLPQSPQQFK_ 0 0 0 A8K4A8;A0A024R8Z9;Q6PI48;Q9H9J7 A8K4A8 A8K4A8 DARS2 Aspartate--tRNA ligase, mitochondrial MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8973 2 735.374809 1468.73507 73456.69 1.0565 0.0007769 -1.6774 -0.0012335 -0.62092 -0.00045661 735.373183545812 739.381431088191 83.868 0.4305 83.868 83.556 83.987 0 84 37 4 0 0 0 0.025904 1 51285 57.598 57.598 1 1.8618 1.8962 0 9216600 3071800 6144800 12169 266 4630 4752 18981 18981 FYTFICSVCSSGPEYLK 17 1 0 Unmodified _FYTFICSVCSSGPEYLK_ 0 0 0 Q9Y483;Q96G26;B4DZG1;B4DZ69;Q7Z534 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1033.9807 2 1029.47099 2056.92744 59737.7 0.57351 0.00059041 -0.13323 -0.00013716 0.44028 0.00045325 1029.97332069867 1033.97927913852 123.98 0.35612 123.98 123.81 124.16 7.6294E-06 55 14 6 0 0 0 0.0017466 1 74226 38.674 33.289 1 1.92 1.4908 0 3567700 1390800 2176900 12170 2143 4631 4753 18982 18982 FYTFICSVCSSGPEYLK 17 1 0 Unmodified _FYTFICSVCSSGPEYLK_ 0 0 0 Q9Y483;Q96G26;B4DZG1;B4DZ69;Q7Z534 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1033.9801 2 1029.47099 2056.92744 61898.45 0.51417 0.00052932 0.27287 0.00028091 0.78703 0.00081023 1029.47225956285 1033.47848044431 123.87 0.34298 123.87 123.66 124 0 66 12 7 0 0 0 0.0065288 1 73141 34 28.507 1 2.595 2.1038 0 2778900 890290 1888700 12171 2143 4631 4753 18983 18983 FYTLIPHDFGMK 12 1 0 Oxidation (M) _FYTLIPHDFGM(ox)K_ FYTLIPHDFGM(1)K FYTLIPHDFGM(79.97)K 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.8737 2 742.865763 1483.71697 69799.81 1.0656 0.00079159 1.4125 0.0010493 2.4781 0.0018409 742.865707294956 746.873131929518 91.337 1.0273 91.337 90.636 91.663 0 347 83 8 0 0 0 9.9806E-05 4 55369 79.974 79.974 1 0.96819 1.0293 0 31686000 15219000 16467000 12172 139 4632 4754 18984;18985;18986;18987 18986 118 FYTLIPHDFGMK 12 1 0 Oxidation (M) _FYTLIPHDFGM(ox)K_ FYTLIPHDFGM(1)K FYTLIPHDFGM(71.35)K 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.8738 2 742.865763 1483.71697 73074.26 0.74303 0.00055197 1.0208 0.00075828 1.7638 0.0013103 742.867068906631 746.873355820332 89.814 0.92824 89.814 89.373 90.301 7.6294E-06 227 79 6 0 0 0 0.00020034 1 55426 71.349 71.349 1 0.87394 0.88309 0 28639000 16578000 12060000 12173 139 4632 4754 18988 18988 118 FYTLIPHDFGMK 12 1 0 Oxidation (M) _FYTLIPHDFGM(ox)K_ FYTLIPHDFGM(1)K FYTLIPHDFGM(43.44)K 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 747.3719 2 742.865763 1483.71697 70412.45 0.49423 0.00036714 0.26062 0.00019361 0.75485 0.00056075 742.866564814834 746.872758318019 102.69 0.99779 102.69 102.17 103.17 0 230 67 6 0 0 0 0.0071 1 57279 43.442 39.679 1 0.82105 0.66989 0 6129500 3233400 2896200 12174 139 4632 4754 18989 18989 118 FYVTTCVGK 9 1 0 Unmodified _FYVTTCVGK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.775 2 537.76806 1073.52157 83263.68 0.74282 0.00039947 -0.72446 -0.00038959 0.018358 9.8724E-06 537.767854242191 541.774827011421 57.215 0.58878 57.215 56.983 57.572 0 159 43 6 0 0 0 0.0028653 2 32232 73.248 38.44 1 0.85017 0.83268 0 22183000 10295000 11887000 12175 486 4633 4755 18990;18991 18990 FYVTTCVGK 9 1 0 Unmodified _FYVTTCVGK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.7679 2 537.76806 1073.52157 85366.17 0.46169 0.00024828 -0.40643 -0.00021856 0.055268 2.9721E-05 537.767827236091 541.77497591122 56.278 0.54462 56.278 56.018 56.563 -3.8147E-06 184 40 7 0 0 0 0.003784 2 32260 70.919 36.111 1 0.94788 1.0083 0 23310000 11653000 11657000 12176 486 4633 4755 18992;18993 18992 FYVTTCVGK 9 1 0 Unmodified _FYVTTCVGK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.7751 2 537.76806 1073.52157 81881.66 0.68031 0.00036585 -0.44854 -0.00024121 0.23177 0.00012464 537.767863627628 541.774956283126 66.322 1.0786 66.322 66.026 67.105 0 210 63 6 0 0 0 0.021548 2 34285 49.418 15.959 1 1.2876 1.0191 0 5007500 2276800 2730700 12177 486 4633 4755 18994;18995 18994 GAAAAAAASGAAGGGGGGAGAGAPGGGR 28 0 1 Unmodified _GAAAAAAASGAAGGGGGGAGAGAPGGGR_ 0 0 0 Q68E01 Q68E01 Q68E01 INTS3 Integrator complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 976.9676 2 976.967707 1951.92086 62776.99 -0.051262 -5.0081E-05 0.033094 3.2332E-05 -0.018168 -1.7749E-05 976.967638756953 981.972514046836 24.708 0.23703 24.708 24.594 24.831 0 44 10 6 0 0 0 4.4007E-54 2 10427 143.28 132.64 1 1.297 1.318 0 7445200 2633100 4812000 12178 1840 4634 4756 18996;18997 18997 GAAAAAAASGAAGGGGGGAGAGAPGGGR 28 0 1 Unmodified _GAAAAAAASGAAGGGGGGAGAGAPGGGR_ 0 0 0 Q68E01 Q68E01 Q68E01 INTS3 Integrator complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.9708 2 976.967707 1951.92086 63168.58 0.26449 0.0002584 -0.40631 -0.00039695 -0.14182 -0.00013855 976.967880462446 981.971482803689 24.597 0.23843 24.597 24.478 24.716 0 49 11 6 0 0 0 3.432E-66 1 10338 153.79 141.43 1 0.95569 0.96205 0 10820000 5554800 5264900 12179 1840 4634 4756 18998 18998 GAAAAAAASGAAGGGGGGAGAGAPGGGR 28 0 1 Unmodified _GAAAAAAASGAAGGGGGGAGAGAPGGGR_ 0 0 0 Q68E01 Q68E01 Q68E01 INTS3 Integrator complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 977.4705 2 976.967707 1951.92086 63024.46 -0.20638 -0.00020163 0.070807 6.9176E-05 -0.13557 -0.00013245 976.967982828532 981.972136476681 28.704 0.24854 28.704 28.596 28.845 0 91 17 7 0 0 0 0.0010276 1 10992 30.974 30.885 1 0.85269 0.77046 0 2209000 1145800 1063200 12180 1840 4634 4756 18999 18999 GAAEGSGGDGEGPPGEAGAEK 21 1 0 Unmodified _GAAEGSGGDGEGPPGEAGAEK_ 0 0 0 Q14DW8;A0A087WWK9;P31277 Q14DW8 Q14DW8 HOXD11 Homeobox protein Hox-D11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.389 2 900.387559 1798.76056 NaN NaN NaN 0.92069 0.00082898 NaN NaN NaN NaN 19.831 0.10224 19.831 19.785 19.888 0 0 0 0 1.9162E-12 1 6220 84.566 75.378 1 NaN NaN 0 2865500 2865500 0 12181 426 4635 4757 19000 19000 GAAGRPLELSDFR 13 0 2 Unmodified _GAAGRPLELSDFR_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;Q9P1N8 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.5807 3 463.58088 1387.72081 87709.47 0.33077 0.00015334 -0.58599 -0.00027165 -0.25522 -0.00011831 463.580738127366 470.252560545552 65.65 1.4353 65.65 64.719 66.154 0 513 129 5 0 0 0 0.00034511 2 37916 52.265 42.214 1 0.97528 1.0598 0 39158000 19940000 19217000 12182 334 4636 4758 19001;19002 19002 GAAGRPLELSDFR 13 0 2 Unmodified _GAAGRPLELSDFR_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;Q9P1N8 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.9157 3 463.58088 1387.72081 88451.34 0.30334 0.00014062 -0.29018 -0.00013452 0.013163 6.1022E-06 463.580752146886 470.252773759024 63.374 1.0004 63.374 63.006 64.006 0 471 86 9 0 0 0 0.0002551 2 37171 53.001 53.001 1 1.0248 1.183 0 66472000 30841000 35632000 12183 334 4636 4758 19003;19004 19004 GAAGRPLELSDFR 13 0 2 Unmodified _GAAGRPLELSDFR_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;Q9P1N8 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.2523 3 463.58088 1387.72081 86814.6 0.37967 0.00017601 -0.36042 -0.00016709 0.019245 8.9216E-06 463.580719940204 470.252774425486 74.669 0.57816 74.669 74.396 74.974 0 192 40 8 0 0 0 0.0039472 2 39576 43.813 31.545 1 1.0296 0.85731 0 17339000 8875400 8463800 12184 334 4636 4758 19005;19006 19005 GAAGRPLELSDFR 13 0 2 Unmodified _GAAGRPLELSDFR_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;Q9P1N8 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 470.2523 3 463.58088 1387.72081 87238.73 0.12862 5.9624E-05 -0.46489 -0.00021551 -0.33627 -0.00015589 463.580742728624 470.252664180167 74.904 0.60242 74.904 74.573 75.175 -7.6294E-06 161 36 6 0 0 0 0.0057073 3 38916 39.509 39.509 1 1.0978 1.0109 0 14892000 7515500 7376800 12185 334 4636 4758 19007;19008;19009 19008 GAALDVHESEPFSFAQGPLK 20 1 0 Unmodified _GAALDVHESEPFSFAQGPLK_ 0 0 0 Q5SQP8;P56545 Q5SQP8 Q5SQP8 CTBP2 C-terminal-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.6915 3 700.684733 2099.03237 73142.45 0.79787 0.00055906 0.025038 1.7544E-05 0.82291 0.0005766 701.018320293262 703.690623510881 99.965 0.60646 99.965 99.548 100.15 0 125 51 7 0 0 0 0.0017901 1 61265 27.443 24.699 1 2.5322 2.5993 0 17552000 5111100 12441000 12186 1620 4637 4759 19010 19010 GAAYGLAGLVK 11 1 0 Unmodified _GAAYGLAGLVK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.3047 2 510.297842 1018.58113 85295.95 0.35863 0.00018301 0.33208 0.00016946 0.69071 0.00035247 510.297999089429 514.304783284624 83.398 0.45884 83.398 83.146 83.604 0 135 38 5 0 0 0 0.0082908 1 49840 51.066 33.953 1 1.6911 1.6694 0 19403000 6715700 12687000 12187 1205 4638 4760 19011 19011 GAAYGLAGLVK 11 1 0 Unmodified _GAAYGLAGLVK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.3046 2 510.297842 1018.58113 86075.41 0.24558 0.00012532 0.075007 3.8276E-05 0.32058 0.00016359 510.297750953082 514.304602200628 82.235 0.54595 82.235 81.921 82.467 7.6294E-06 149 48 6 0 0 0 0.0082908 1 50312 51.066 51.066 1 1.9307 2.0529 0 20630000 7121400 13509000 12188 1205 4638 4760 19012 19012 GACYGADHDLGR 12 0 1 Unmodified _GACYGADHDLGR_ 0 0 0 H7C3J0;B4DKE1;Q6NUM9 H7C3J0 H7C3J0 RETSAT All-trans-retinol 13,14-reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.2787 2 646.277843 1290.54113 74515.8 0.67323 0.0004351 -0.98401 -0.00063595 -0.31078 -0.00020085 646.77791105874 651.28160974896 21.705 0.22116 21.705 21.624 21.845 0 31 11 4 0 0 0 0.02594 1 7823 36.585 36.585 1 1.3628 1.3757 0 5756500 2934800 2821700 12189 988 4639 4761 19013 19013 GADFLVTEVENGGSLGSK 18 1 0 Unmodified _GADFLVTEVENGGSLGSK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;Q8WUW7 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.9511 2 890.441605 1778.86866 NaN NaN NaN -0.42248 -0.00037619 NaN NaN NaN NaN 102.43 0.73473 102.43 102.12 102.85 0 0 0 0 8.3995E-13 1 63048 100.22 90.79 1 NaN NaN 0 26226000 0 26226000 12190 1481 4640 4762 19014 19014 GADFLVTEVENGGSLGSK 18 1 0 Unmodified _GADFLVTEVENGGSLGSK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;Q8WUW7 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.9509 2 890.441605 1778.86866 NaN NaN NaN -0.15275 -0.00013601 NaN NaN NaN NaN 101.85 0.75984 101.85 101.46 102.22 0 0 0 0 2.0359E-41 1 64131 152 137.1 1 NaN NaN 0 48508000 0 48508000 12191 1481 4640 4762 19015 19015 GADFLVTEVENGGSLGSK 18 1 0 Unmodified _GADFLVTEVENGGSLGSK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;Q8WUW7 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 894.4482 2 890.441605 1778.86866 NaN NaN NaN -0.3219 -0.00028664 NaN NaN NaN NaN 114.59 0.4695 114.59 114.33 114.8 7.6294E-06 0 0 0 0.0054879 1 66902 45.115 38.875 1 NaN NaN 0 4289700 0 4289700 12192 1481 4640 4762 19016 19016 GADFLVTEVENGGSLGSK 18 1 0 Unmodified _GADFLVTEVENGGSLGSK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;Q8WUW7 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 894.4485 2 890.441605 1778.86866 64061.99 0.35097 0.00031251 0.38376 0.00034171 0.73472 0.00065423 890.944716613237 894.448623915239 114.46 0.53761 114.46 114.27 114.81 7.6294E-06 114 22 8 0 0 0 0.00022211 2 65925 47.774 47.774 1 2.1754 1.7702 0 7155600 2056900 5098700 12193 1481 4640 4762 19017;19018 19017 GADTAPTLAPEALPSQGEVER 21 0 1 Unmodified _GADTAPTLAPEALPSQGEVER_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1060.5336 2 1055.02656 2108.03858 NaN NaN NaN 0.18934 0.00019976 NaN NaN NaN NaN 84.9 0.38919 84.9 84.681 85.07 0 0 0 0 0.00024582 2 50884 50.843 42.022 1 NaN NaN 0 5376100 0 5376100 12194 746 4641 4763 19019;19020 19020 GADTAPTLAPEALPSQGEVER 21 0 1 Unmodified _GADTAPTLAPEALPSQGEVER_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1055.0292 2 1055.02656 2108.03858 60082.98 0.69004 0.00072801 -0.3825 -0.00040355 0.30754 0.00032446 1055.52804198459 1060.03001794333 84.172 0.37449 84.172 83.957 84.331 -7.6294E-06 71 29 4 0 0 0 5.5814E-05 3 51662 43.184 43.184 1 1.0144 0.996 0 14115000 3610300 10505000 12195 746 4641 4763 19021;19022;19023 19022 GADTAPTLAPEALPSQGEVER 21 0 1 Unmodified _GADTAPTLAPEALPSQGEVER_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1060.0316 2 1055.02656 2108.03858 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.991 1 83.991 83.491 84.491 0 0 0 0 0.035396 1 51528 33.616 20.212 1 12196 746 4641 4763 19024 19024 GADVFLEALAR 11 0 1 Unmodified _GADVFLEALAR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.8227 2 581.316763 1160.61897 80698.4 0.87112 0.0005064 0.22364 0.00013 1.0948 0.0006364 581.316770140671 586.320862749467 111.76 0.62975 111.76 111.46 112.09 0 180 45 5 0 0 0 0.001099 2 70458 70.1 61.044 1 0.46712 0.49452 0 41217000 29377000 11841000 12197 1479 4642 4764 19025;19026 19026 GADVFLEALAR 11 0 1 Unmodified _GADVFLEALAR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.3168 2 581.316763 1160.61897 80481.01 0.69583 0.0004045 -0.22896 -0.0001331 0.46687 0.0002714 581.31663740285 586.320811724569 111.12 0.56998 111.12 110.85 111.42 0 193 41 6 0 0 0 0.0023522 2 71484 61.78 61.78 1 0.50558 0.50381 0 16536000 11330000 5206300 12198 1479 4642 4764 19027;19028 19027 GADVFLEALAR 11 0 1 Unmodified _GADVFLEALAR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.3215 2 581.316763 1160.61897 79677.38 0.82046 0.00047695 -0.019407 -1.1281E-05 0.80105 0.00046567 581.316625174012 586.320789465514 122.9 0.75426 122.9 122.65 123.41 -7.6294E-06 153 34 7 0 0 0 0.00040176 1 73367 81.338 72.124 1 0.49033 0.40339 0 11845000 7521900 4323000 12199 1479 4642 4764 19029 19029 GADVFLEALAR 11 0 1 Unmodified _GADVFLEALAR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.3207 2 581.316763 1160.61897 80928.03 0.77395 0.00044991 -0.097445 -5.6646E-05 0.67651 0.00039327 581.316643600315 586.320758247625 122.74 0.65746 122.74 122.46 123.12 0 156 31 7 0 0 0 0.0004546 2 72346 77.192 71.41 1 0.47501 0.38496 0 10317000 6957400 3359800 12200 1479 4642 4764 19030;19031 19031 GAEAANVTGPGGVPVQGSK 19 1 0 Unmodified _GAEAANVTGPGGVPVQGSK_ 0 0 0 P67809;Q6PKI6;Q7KZ24;H0Y449 P67809 P67809 YBX1 Nuclease-sensitive element-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.4367 2 848.436658 1694.85876 65176.93 0.72547 0.00061552 -0.0019133 -1.6233E-06 0.72356 0.00061389 848.937972146568 852.443817529345 47.795 0.54353 47.795 47.54 48.084 0 223 47 7 0 0 0 1.5915E-05 1 25869 83.729 77.884 1 2.0368 2.2894 0 70166000 19173000 50993000 12201 1657 4643 4765 19032 19032 GAEAANVTGPGGVPVQGSK 19 1 0 Unmodified _GAEAANVTGPGGVPVQGSK_ 0 0 0 P67809;Q6PKI6;Q7KZ24;H0Y449 P67809 P67809 YBX1 Nuclease-sensitive element-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.4456 2 848.436658 1694.85876 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.616 1 47.616 47.116 48.116 0 0 0 0 5.3363E-30 1 25851 134.21 121.99 1 12202 1657 4643 4765 19033 19033 GAEAANVTGPGGVPVQGSK 19 1 0 Unmodified _GAEAANVTGPGGVPVQGSK_ 0 0 0 P67809;Q6PKI6;Q7KZ24;H0Y449 P67809 P67809 YBX1 Nuclease-sensitive element-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.4459 2 848.436658 1694.85876 66052.41 0.90841 0.00077073 -0.034255 -2.9063E-05 0.87416 0.00074167 848.436504827316 852.443768591014 46.62 0.57847 46.62 46.433 47.011 0 272 49 8 0 0 0 4.1011E-51 2 25701 170.11 170.11 1 2.3975 2.7006 0 69127000 17416000 51711000 12203 1657 4643 4765 19034;19035 19034 GAEAANVTGPGGVPVQGSK 19 1 0 Unmodified _GAEAANVTGPGGVPVQGSK_ 0 0 0 P67809;Q6PKI6;Q7KZ24;H0Y449 P67809 P67809 YBX1 Nuclease-sensitive element-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 852.4439 2 848.436658 1694.85876 66104.79 0.70731 0.00060011 -0.15538 -0.00013183 0.55193 0.00046828 848.436443176083 852.443713334182 55.317 0.60485 55.317 54.985 55.59 0 222 39 7 0 0 0 0.011574 1 27581 24.425 24.425 1 1.0254 0.81986 0 8909800 4341400 4568400 12204 1657 4643 4765 19036 19036 GAEAANVTGPGGVPVQGSK 19 1 0 Unmodified _GAEAANVTGPGGVPVQGSK_ 0 0 0 P67809;Q6PKI6;Q7KZ24;H0Y449 P67809 P67809 YBX1 Nuclease-sensitive element-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 852.4448 2 848.436658 1694.85876 65585.98 0.56826 0.00048213 -0.095366 -8.0912E-05 0.4729 0.00040122 848.436494180383 852.443801347466 55.847 0.63693 55.847 55.558 56.195 -3.8147E-06 232 41 7 0 0 0 2.2813E-30 2 27491 145.49 145.49 1 0.97621 0.79847 0 8353500 4613200 3740300 12205 1657 4643 4765 19037;19038 19038 GAEADQIIEYLK 12 1 0 Unmodified _GAEADQIIEYLK_ 0 0 0 Q12904;D6R937;B4DNK3 Q12904 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3439 2 675.351 1348.68745 80281.33 0.68674 0.00046379 0.26023 0.00017575 0.94697 0.00063954 675.351961518995 679.35813610083 103.85 0.67017 103.85 103.51 104.18 0 149 53 5 0 0 0 0.0069381 1 64022 86.898 78.366 1 1.478 1.4834 0 7508100 3177100 4331000 12206 1702 4644 4766 19039 19039 GAEAFGDSEEDGEDVFEVEK 20 1 0 Unmodified _GAEAFGDSEEDGEDVFEVEK_ 0 0 0 Q99549;B3KS10 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1084.4615 2 1079.95039 2157.88622 60392.52 -0.043581 -4.7065E-05 -0.042933 -4.6365E-05 -0.086514 -9.3431E-05 1080.9531700948 1084.4590393057 104.46 0.50231 104.46 104.19 104.69 0 130 29 7 0 0 0 0.042684 1 58603 21.237 21.171 1 1.2005 0.97382 0 2808900 1282100 1526800 12207 1994 4645 4767 19040 19040 GAEEWILTGSYDK 13 1 0 Unmodified _GAEEWILTGSYDK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.8531 2 734.851364 1467.68817 72653.13 0.9089 0.0006679 0.25015 0.00018382 1.159 0.00085172 734.851634576368 738.858504762432 93.894 0.8902 93.894 93.546 94.437 -7.6294E-06 333 80 7 0 0 0 0.0001575 1 56846 86.313 86.313 1 0.56662 0.62417 0 55470000 38404000 17066000 12208 1792 4646 4768 19041 19041 GAEEWILTGSYDK 13 1 0 Unmodified _GAEEWILTGSYDK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.354 2 734.851364 1467.68817 73219.75 0.84819 0.00062329 -0.087401 -6.4226E-05 0.76079 0.00055907 734.851405293527 738.858541992699 93.146 0.93609 93.146 92.719 93.655 7.6294E-06 312 81 6 0 0 0 0.00012317 1 57607 90.653 90.653 1 0.46372 0.51038 0 42750000 27729000 15021000 12209 1792 4646 4768 19042 19042 GAEEWILTGSYDK 13 1 0 Unmodified _GAEEWILTGSYDK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.3528 2 734.851364 1467.68817 71016.09 0.69939 0.00051395 -0.16984 -0.00012481 0.52956 0.00038915 734.851470872525 738.858472841088 106.86 0.62658 106.86 106.54 107.17 0 207 37 8 0 0 0 0.0018658 1 60219 56.087 56.087 1 0.75298 0.62247 0 11828000 5786900 6040800 12210 1792 4646 4768 19043 19043 GAEGLGEEGGLHQDPLR 17 0 1 Unmodified _GAEGLGEEGGLHQDPLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.9281 2 867.923914 1733.83328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.424 1 55.424 54.924 55.924 0 0 0 0 0.020421 1 31157 42.785 29.829 1 12211 260 4647 4769 19044 19044 GAEGLGEEGGLHQDPLR 17 0 1 Unmodified _GAEGLGEEGGLHQDPLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.3262 3 578.951702 1733.83328 80276.79 0.56641 0.00032792 0.066713 3.8624E-05 0.63312 0.00036655 579.286021614367 582.287737933227 55.386 0.61558 55.386 54.982 55.597 3.8147E-06 145 58 4 0 0 0 0.037249 1 31057 37.645 37.645 1 2.328 2.3603 0 28110000 6944600 21166000 12212 260 4647 4769 19045 19045 GAEGLGEEGGLHQDPLR 17 0 1 Unmodified _GAEGLGEEGGLHQDPLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.9515 3 578.951702 1733.83328 81924.63 0.48144 0.00027873 -0.84977 -0.00049198 -0.36834 -0.00021325 578.951018475437 582.286943421894 54.164 0.65202 54.164 53.883 54.535 0 180 57 6 0 0 0 0.0027241 1 30899 32.507 32.507 1 1.6667 1.8258 0 31587000 15671000 15916000 12213 260 4647 4769 19046 19046 GAEGLGEEGGLHQDPLR 17 0 1 Unmodified _GAEGLGEEGGLHQDPLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.928 2 867.923914 1733.83328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.131 1 54.131 53.631 54.631 0 0 0 0 4.8493E-06 1 30928 94.09 77.458 1 12214 260 4647 4769 19047 19047 GAEGLGEEGGLHQDPLR 17 0 1 Unmodified _GAEGLGEEGGLHQDPLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.9242 2 867.923914 1733.83328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.143 1 54.143 53.643 54.643 3.8147E-06 0 0 0 0.004859 1 30935 51.211 37.783 1 12215 260 4647 4769 19048 19048 GAEGLGEEGGLHQDPLR 17 0 1 Unmodified _GAEGLGEEGGLHQDPLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.9308 2 867.923914 1733.83328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.15 1 54.15 53.65 54.65 0 0 0 0 0.00025062 1 30938 74.987 58.355 1 12216 260 4647 4769 19049 19049 GAEGLGEEGGLHQDPLR 17 0 1 Unmodified _GAEGLGEEGGLHQDPLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.2859 3 578.951702 1733.83328 79251.45 0.47148 0.00027296 -0.051234 -2.9662E-05 0.42025 0.0002433 578.951539111912 582.287888558648 64.72 0.51596 64.72 64.451 64.966 0 149 35 6 0 0 0 0.045458 1 33453 15.422 11.981 1 1.6126 1.3725 0 5413000 2098700 3314300 12217 260 4647 4769 19050 19050 GAEGLGEEGGLHQDPLR 17 0 1 Unmodified _GAEGLGEEGGLHQDPLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 872.9259 2 867.923914 1733.83328 67664.4 0.11381 9.8783E-05 0.092411 8.0205E-05 0.20623 0.00017899 867.924214614699 872.928316179936 65.228 0.34406 65.228 65.037 65.381 0 87 22 6 0 0 0 0.016072 1 32881 27.862 22.684 1 1.2888 1.1648 0 2121100 1058500 1062600 12218 260 4647 4769 19051 19051 GAEGLGEEGGLHQDPLR 17 0 1 Unmodified _GAEGLGEEGGLHQDPLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.9521 3 578.951702 1733.83328 79211.66 0.24632 0.00014261 0.40099 0.00023216 0.64732 0.00037477 578.95183408671 582.288397413087 65.228 0.4548 65.228 64.952 65.407 0 141 32 6 0 0 0 0.00041774 2 32920 41.412 38.024 1 1.644 1.377 0 4892300 2007800 2884400 12219 260 4647 4769 19052;19053 19053 GAEHITTYTFNTHK 14 1 0 Unmodified _GAEHITTYTFNTHK_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.6 3 540.5986 1618.77397 81795.74 0.82525 0.00044613 0.91595 0.00049516 1.7412 0.00094129 540.933426243728 543.270385153282 36.186 0.36536 36.186 35.986 36.352 -3.8147E-06 170 34 7 0 0 0 6.3692E-07 1 18244 106.58 100.28 1 1.1975 1.3051 0 49696000 22907000 26789000 12220 1882 4648 4770 19054 19054 GAEQLAEGGR 10 0 1 Unmodified _GAEQLAEGGR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.251 2 494.246338 986.478122 87049.62 0.34757 0.00017179 0.31899 0.00015766 0.66656 0.00032945 494.24645972419 499.250475142821 21.515 0.36073 21.515 21.33 21.69 0 86 19 6 0 0 0 4.5895E-06 3 7808 109.29 48.854 1 1.3808 1.4215 0 24825000 10942000 13883000 12221 1694 4649 4771 19055;19056;19057 19056 GAETELVR 8 0 1 Unmodified _GAETELVR_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709;F5H359;F5H8G6 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 437.735 2 437.735074 873.455596 91988.02 -0.15802 -6.9173E-05 0.53781 0.00023542 0.37979 0.00016625 437.73513603835 442.739308614417 29.734 0.27428 29.734 29.588 29.862 0 82 21 6 0 0 0 0.0066199 1 14442 86.472 37.114 1 1.1012 1.2242 0 74423000 36267000 38156000 12222 1570 4650 4772 19058 19058 GAETELVR 8 0 1 Unmodified _GAETELVR_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709;F5H359;F5H8G6 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.7359 2 437.735074 873.455596 93071.73 0.61378 0.00026867 0.084845 3.714E-05 0.69862 0.00030581 437.734952343082 442.73913024417 29.205 0.27162 29.205 29.096 29.368 -1.9073E-06 73 18 6 0 0 0 0.010845 1 14044 71.296 28.577 1 0.97327 1.1323 0 62011000 28457000 33555000 12223 1570 4650 4772 19059 19059 GAETELVR 8 0 1 Unmodified _GAETELVR_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709;F5H359;F5H8G6 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 442.7392 2 437.735074 873.455596 90963.05 0.04091 1.7908E-05 0.010475 4.5854E-06 0.051386 2.2493E-05 437.734952447946 442.739068002478 33.602 0.31409 33.602 33.483 33.797 0 86 25 6 0 0 0 0.024726 1 14753 55.676 31.704 1 1.243 1.0376 0 10470000 4319200 6151300 12224 1570 4650 4772 19060 19060 GAETELVR 8 0 1 Unmodified _GAETELVR_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709;F5H359;F5H8G6 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 442.7395 2 437.735074 873.455596 90907.77 -0.033097 -1.4488E-05 -0.007991 -3.4979E-06 -0.041088 -1.7986E-05 437.73494565602 442.739063468958 33.681 0.26749 33.681 33.556 33.824 0 75 20 5 0 0 0 0.012693 1 14285 67.032 33.294 1 1.2241 0.98742 0 10998000 4569900 6428100 12225 1570 4650 4772 19061 19061 GAFASLSELHCDK 13 1 0 Unmodified _GAFASLSELHCDK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.8387 2 717.837733 1433.66091 NaN NaN NaN 0.041579 2.9847E-05 NaN NaN NaN NaN 61.815 0.91319 61.815 61.295 62.209 0 0 0 0 4.2939E-22 1 35373 143.24 128.57 1 NaN NaN 0 31068000 31068000 0 + 12226 1172 4651 4773 19062 19062 GAFASLSELHCDK 13 1 0 Unmodified _GAFASLSELHCDK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.8389 2 717.837733 1433.66091 NaN NaN NaN -0.15482 -0.00011113 NaN NaN NaN NaN 71.416 0.90909 71.416 70.785 71.694 0 0 0 0 0.022107 1 37345 46.844 40.541 1 NaN NaN 0 8567200 8567200 0 + 12227 1172 4651 4773 19063 19063 GAFGKPQGTVAR 12 1 1 Unmodified _GAFGKPQGTVAR_ 0 0 1 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 402.895 3 396.887645 1187.64111 92779.46 -0.31796 -0.00012619 0.329 0.00013058 0.011044 4.3832E-06 396.887791345404 402.89525446801 21.825 0.55768 21.825 21.69 22.248 0 168 32 9 0 0 0 0.00010314 2 7992 71.085 56.267 1 0.96977 1.1735 0 219110000 108410000 110690000 12228 1524;1266 4652 4774 19064;19065 19065 GAFGKPQGTVAR 12 1 1 Unmodified _GAFGKPQGTVAR_ 0 0 1 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.8278 2 594.827829 1187.64111 76588.05 0.31762 0.00018893 -0.0034725 -2.0655E-06 0.31415 0.00018686 594.827977711776 603.838847263977 21.84 0.39841 21.84 21.676 22.074 1.9073E-06 139 23 9 0 0 0 0.0036233 1 8006 83.869 69.202 1 0.92917 1.1243 0 216480000 113010000 103470000 12229 1524;1266 4652 4774 19066 19066 GAFGKPQGTVAR 12 1 1 Unmodified _GAFGKPQGTVAR_ 0 0 1 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 402.8951 3 396.887645 1187.64111 93527.52 0.094154 3.7369E-05 -0.2698 -0.00010708 -0.17564 -6.9711E-05 396.887534824787 402.895022842128 21.638 0.57773 21.638 21.444 22.021 0 167 26 10 0 0 0 5.9973E-07 2 7723 96.604 80.74 1 0.9385 1.1135 0 292480000 144590000 147880000 12230 1524;1266 4652 4774 19067;19068 19068 GAFGKPQGTVAR 12 1 1 Unmodified _GAFGKPQGTVAR_ 0 0 1 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.8396 2 594.827829 1187.64111 76889.7 0.52364 0.00031148 -0.063335 -3.7674E-05 0.4603 0.0002738 594.827739726355 603.839091575457 21.635 0.57773 21.635 21.444 22.021 0 140 26 9 0 0 0 1.2974E-07 2 7734 119.94 105.27 1 0.89599 1.0648 0 378750000 194410000 184340000 12231 1524;1266 4652 4774 19069;19070 19069 GAFGKPQGTVAR 12 1 1 Unmodified _GAFGKPQGTVAR_ 0 0 1 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 402.895 3 396.887645 1187.64111 92470.09 0.065578 2.6027E-05 -0.14929 -5.9251E-05 -0.08371 -3.3224E-05 396.887665452379 402.89507477411 23.795 1.0775 23.795 23.476 24.553 0 271 58 9 0 0 0 0.017758 2 8124 33.273 26.832 1 1.159 1.0441 0 112780000 55108000 57674000 12232 1524;1266 4652 4774 19071;19072 19071 GAFGKPQGTVAR 12 1 1 Unmodified _GAFGKPQGTVAR_ 0 0 1 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 396.8878 3 396.887645 1187.64111 93136.98 -0.14826 -5.8844E-05 -0.10985 -4.3599E-05 -0.25812 -0.00010244 396.887695707018 402.895087443302 23.703 0.90394 23.703 23.44 24.344 -1.9073E-06 282 54 9 0 0 0 0.0082097 2 7560 41.242 34.354 1 1.1271 0.96185 0 66752000 32878000 33874000 12233 1524;1266 4652 4774 19073;19074 19073 GAFIQLLR 8 0 1 Unmodified _GAFIQLLR_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.2818 2 459.281995 916.549437 90044.14 0.42589 0.0001956 -0.15178 -6.9711E-05 0.2741 0.00012589 459.281871074848 464.285963679645 98.058 1.0598 98.058 97.576 98.636 0 193 87 5 0 0 0 0.0082465 2 60076 79.454 21.99 1 1.0761 1.0984 0 30895000 15892000 15004000 12234 1721 4653 4775 19075;19076 19076 GAFIQLLR 8 0 1 Unmodified _GAFIQLLR_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.2819 2 459.281995 916.549437 90473.39 0.63056 0.0002896 -0.24577 -0.00011288 0.38478 0.00017672 459.281792764227 464.285999821403 97.112 0.82867 97.112 96.731 97.56 0 238 66 5 0 0 0 0.0059854 2 60637 88.734 23.958 1 1.0285 1.0972 0 24621000 11364000 13256000 12235 1721 4653 4775 19077;19078 19078 GAFIQLLR 8 0 1 Unmodified _GAFIQLLR_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.2864 2 459.281995 916.549437 88912.36 0.52597 0.00024157 -0.42372 -0.0001946 0.10225 4.6963E-05 459.281680923019 464.285863527223 110.95 0.73614 110.95 110.66 111.39 7.6294E-06 129 30 6 0 0 0 0.031924 1 64116 50.966 7.9657 1 1.2379 1.0656 0 7305800 2938300 4367600 12236 1721 4653 4775 19079 19079 GAGGALLTPK 10 1 0 Unmodified _GAGGALLTPK_ 0 0 0 Q8N1G0;H0Y5I5 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.7649 2 442.763635 883.512717 92252.04 0.040727 1.8032E-05 0.12398 5.4895E-05 0.16471 7.2928E-05 442.763497727983 446.770858247328 40.301 0.54763 40.301 39.881 40.428 0 159 45 5 0 0 0 0.012875 1 20923 50.04 41.7 1 0.87116 0.92008 0 31003000 16207000 14796000 12237 1905 4654 4776 19080 19080 GAGGALLTPK 10 1 0 Unmodified _GAGGALLTPK_ 0 0 0 Q8N1G0;H0Y5I5 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.7632 2 442.763635 883.512717 91746.52 0.081848 3.6239E-05 0.037247 1.6492E-05 0.1191 5.2731E-05 442.763414743034 446.770846776576 39.2 0.5037 39.2 38.895 39.398 0 166 43 5 0 0 0 0.0052298 2 20672 60.436 48.291 1 0.91374 0.99176 0 39194000 20969000 18224000 12238 1905 4654 4776 19081;19082 19081 GAGIGGLGITVEGPSESK 18 1 0 Unmodified _GAGIGGLGITVEGPSESK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.9359 2 814.928134 1627.84172 69872.05 0.84853 0.00069149 0.31287 0.00025497 1.1614 0.00094646 814.928145308312 818.935192453208 91.489 0.49904 91.489 91.296 91.795 0 119 38 6 0 0 0 6.3737E-05 1 55432 53.869 41.101 1 1.4099 1.385 0 20254000 8097000 12157000 12239 1402 4655 4777 19083 19083 GAGIGGLGITVEGPSESK 18 1 0 Unmodified _GAGIGGLGITVEGPSESK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.929 2 814.928134 1627.84172 69911.89 1.2307 0.001003 0.10737 8.7498E-05 1.3381 0.0010905 814.927234843365 818.935607462027 90.69 0.53342 90.69 90.462 90.996 0 128 41 6 0 0 0 0.0011038 2 56045 36.944 36.944 1 1.5002 1.5069 0 15963000 5164300 10799000 12240 1402 4655 4777 19084;19085 19084 GAGIGGLGITVEGPSESK 18 1 0 Unmodified _GAGIGGLGITVEGPSESK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 818.9366 2 814.928134 1627.84172 68199.38 0.70053 0.00057088 0.12715 0.00010362 0.82768 0.0006745 815.430224764481 818.935170002659 105.03 0.49698 105.03 104.74 105.23 0 74 28 5 0 0 0 0.0010983 1 59854 37.013 37.013 1 2.0504 1.717 0 1851800 582400 1269400 12241 1402 4655 4777 19086 19086 GAGIGGLGITVEGPSESK 18 1 0 Unmodified _GAGIGGLGITVEGPSESK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.9354 2 814.928134 1627.84172 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.76 1 104.76 104.26 105.26 -7.6294E-06 0 0 0 0.023579 1 58835 41.621 27.463 1 12242 1402 4655 4777 19087 19087 GAGLGFSTAPNK 12 1 0 Unmodified _GAGLGFSTAPNK_ 0 0 0 Q1ED39;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.3026 2 560.293288 1118.57202 84598.98 0.76511 0.00042869 0.064952 3.6392E-05 0.83007 0.00046508 560.293086608959 564.300485164772 48.253 0.76492 48.253 48.028 48.793 0 168 59 5 0 0 0 0.00058242 1 26275 68.847 62.256 1 0.96643 0.95015 0 20057000 7789600 12267000 12243 1775 4656 4778 19088 19088 GAGLGFSTAPNK 12 1 0 Unmodified _GAGLGFSTAPNK_ 0 0 0 Q1ED39;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.3007 2 560.293288 1118.57202 81177.04 0.62291 0.00034901 -0.27576 -0.00015451 0.34715 0.0001945 560.293038823503 564.300217338025 55.244 0.63672 55.244 54.985 55.622 0 191 41 7 0 0 0 0.018838 1 27604 40.496 40.496 1 1.9703 1.5592 0 5020000 1764100 3255900 12244 1775 4656 4778 19089 19089 GAGLGFSTAPNK 12 1 0 Unmodified _GAGLGFSTAPNK_ 0 0 0 Q1ED39;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.3008 2 560.293288 1118.57202 80461.01 0.49671 0.0002783 0.021871 1.2254E-05 0.51858 0.00029056 560.292812888423 564.300489272315 55.618 0.72638 55.618 55.212 55.938 0 153 41 6 0 0 0 0.033481 1 27231 35.348 25.761 1 1.9917 1.5793 0 3994200 1362700 2631500 12245 1775 4656 4778 19090 19090 GAGTGGLGLAVEGPSEAK 18 1 0 Unmodified _GAGTGGLGLAVEGPSEAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.9135 2 785.907202 1569.79985 69403.18 0.55471 0.00043595 -0.13968 -0.00010978 0.41503 0.00032617 785.907497920944 789.914147914934 72.816 0.58728 72.816 72.499 73.086 0 208 43 6 0 0 0 1.8761E-16 2 42626 117.7 117.7 1 1.5871 1.7113 0 37574000 15288000 22286000 12246 1504 4657 4779 19091;19092 19092 GAGTGGLGLAVEGPSEAK 18 1 0 Unmodified _GAGTGGLGLAVEGPSEAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.9149 2 785.907202 1569.79985 71031.82 0.48081 0.00037787 -0.22105 -0.00017372 0.25976 0.00020415 785.90714389035 789.914117689656 71.613 0.63351 71.613 71.39 72.024 0 200 51 7 0 0 0 1.1662E-39 3 42964 159.12 159.12 1 1.5078 1.6735 0 48827000 18311000 30516000 12247 1504 4657 4779 19093;19094;19095 19094 GAGTGGLGLAVEGPSEAK 18 1 0 Unmodified _GAGTGGLGLAVEGPSEAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.9135 2 785.907202 1569.79985 70425.5 0.50309 0.00039538 -0.10497 -8.25E-05 0.39811 0.00031288 786.408605876101 789.91425432918 83.317 0.58625 83.317 83.011 83.597 7.6294E-06 133 35 6 0 0 0 0.015605 1 45289 24.558 24.558 1 3.9451 3.1482 0 6895200 1695700 5199500 12248 1504 4657 4779 19096 19096 GAGTGGLGLAVEGPSEAK 18 1 0 Unmodified _GAGTGGLGLAVEGPSEAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.9146 2 785.907202 1569.79985 NaN NaN NaN -0.58531 -0.00046 NaN NaN NaN NaN 83.456 0.57967 83.456 83.185 83.765 0 0 0 0 0.0095771 1 44623 41.621 34.415 1 NaN NaN 0 4666700 0 4666700 12249 1504 4657 4779 19097 19097 GAIILSSLLQSCDLEVANK 19 1 0 Unmodified _GAIILSSLLQSCDLEVANK_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1020.0522 2 1016.04317 2030.07179 60787.64 0.48824 0.00049608 -0.31725 -0.00032234 0.171 0.00017374 1016.04302282999 1020.05048923997 123.58 0.35642 123.58 123.42 123.78 7.6294E-06 113 25 6 0 0 0 3.6849E-12 2 80200 107.37 107.37 1 0.67621 0.67462 0 9697700 4776200 4921500 12250 1761 4658 4780 19098;19099 19099 GAIILSSLLQSCDLEVANK 19 1 0 Unmodified _GAIILSSLLQSCDLEVANK_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1020.0505 2 1016.04317 2030.07179 61005.58 0.73297 0.00074473 -0.58455 -0.00059393 0.14843 0.00015081 1016.54392833247 1020.05027752154 123.15 0.4053 123.15 122.97 123.38 0 165 29 8 0 0 0 5.2519E-07 2 81717 86.772 74.412 1 0.70371 0.70991 0 13311000 7571400 5739500 12251 1761 4658 4780 19100;19101 19100 GAIILSSLLQSCDLEVANK 19 1 0 Unmodified _GAIILSSLLQSCDLEVANK_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1016.5485 2 1016.04317 2030.07179 59824.68 0.48809 0.00049592 0.64073 0.00065101 1.1288 0.0011469 1016.04352242478 1020.04981795758 134.6 0.24834 134.6 134.5 134.75 0 23 6 7 0 0 0 8.4485E-06 2 82269 75.479 70.301 1 0.96517 0.78136 0 23467000 13126000 10341000 12252 1761 4658 4780 19102;19103 19103 GAIILSSLLQSCDLEVANK 19 1 0 Unmodified _GAIILSSLLQSCDLEVANK_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1016.044 2 1016.04317 2030.07179 59838.25 0.40166 0.0004081 0.61505 0.00062492 1.0167 0.001033 1016.0435898524 1020.04964402058 134.54 0.26697 134.54 134.44 134.71 0 30 7 7 0 0 0 2.6523E-17 1 81313 123.28 111.66 1 0.78463 0.64955 0 33612000 16832000 16781000 12253 1761 4658 4780 19104 19104 GALALEEK 8 1 0 Unmodified _GALALEEK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.7345 2 415.734543 829.454533 92626.88 0.34118 0.00014184 0.051208 2.1289E-05 0.39239 0.00016313 415.734310001522 419.741658799759 36.211 0.762 36.211 35.83 36.592 0 316 72 6 0 0 0 0.022432 2 18151 57.177 14.054 1 1.7605 1.9994 0 162200000 54145000 108050000 12254 81 4659 4781 19105;19106 19106 GALALEEK 8 1 0 Unmodified _GALALEEK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 419.7421 2 415.734543 829.454533 93100.91 1.162 0.00048309 -0.20194 -8.3954E-05 0.96007 0.00039914 415.734270739146 419.741553546249 35.329 0.67123 35.329 35.018 35.689 -3.8147E-06 263 62 8 0 0 0 0.013465 2 17924 65.252 15.894 1 1.8007 2.0697 0 172960000 59799000 113160000 12255 81 4659 4781 19107;19108 19107 GALINVPPPFLGLPR 15 0 1 Unmodified _GALINVPPPFLGLPR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.9724 2 780.966668 1559.91878 69504.41 0.88414 0.00069048 0.58506 0.00045691 1.4692 0.0011474 780.967413373333 785.970925676364 127.68 1.07 127.68 127.13 128.2 7.6294E-06 336 66 7 0 0 0 9.8463E-06 2 83176 93.111 93.111 1 0.88059 0.90193 0 14470000 7288000 7182400 12256 363 4660 4782 19109;19110 19109 GALINVPPPFLGLPR 15 0 1 Unmodified _GALINVPPPFLGLPR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.9721 2 780.966668 1559.91878 69358.05 0.88522 0.00069133 0.72508 0.00056627 1.6103 0.0012576 781.469030673441 785.970880849381 127.3 1.1529 127.3 126.59 127.74 0 337 70 7 0 0 0 0.00024607 3 84880 61.593 61.593 1 0.94506 0.93681 0 15741000 7688700 8052600 12257 363 4660 4782 19111;19112;19113 19111 GALQNIIPASTGAAK 15 1 0 Unmodified _GALQNIIPASTGAAK_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;Q5ZEY3 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3998 2 706.398815 1410.78308 71920.88 0.42475 0.00030005 0.063172 4.4625E-05 0.48793 0.00034467 706.398771930373 710.405909036691 81.485 0.98486 81.485 81.039 82.024 0 528 82 10 0 0 0 4.24E-05 3 48394 85.924 85.924 1 2.7696 3.2739 0 398410000 105570000 292840000 12258 1442 4661 4783 19114;19115;19116 19116 GALQNIIPASTGAAK 15 1 0 Unmodified _GALQNIIPASTGAAK_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;Q5ZEY3 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.4066 2 706.398815 1410.78308 72839.95 0.62577 0.00044204 -0.008796 -6.2135E-06 0.61697 0.00043583 706.398698823566 710.405935019296 80.38 1.0511 80.38 79.951 81.002 0 520 83 10 0 0 0 1.3063E-05 2 48764 90.689 71.896 1 2.8289 3.313 0 310090000 82517000 227580000 12259 1442 4661 4783 19117;19118 19117 GALQNIIPASTGAAK 15 1 0 Unmodified _GALQNIIPASTGAAK_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;Q5ZEY3 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.3995 2 706.398815 1410.78308 72851.16 0.72832 0.00051449 0.17658 0.00012473 0.9049 0.00063922 706.398869869705 710.406022906796 93.366 0.85146 93.366 93.025 93.877 7.6294E-06 336 55 10 0 0 0 0.00085206 2 52032 49.423 49.423 1 2.1064 1.7366 0 41478000 13346000 28132000 12260 1442 4661 4783 19119;19120 19120 GALQNIIPASTGAAK 15 1 0 Unmodified _GALQNIIPASTGAAK_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;Q5ZEY3 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 706.3985 2 706.398815 1410.78308 72488.9 0.46974 0.00033183 0.036979 2.6122E-05 0.50672 0.00035795 706.398744363545 710.405943094481 93.294 0.84024 93.294 92.833 93.673 0 320 51 9 0 0 0 0.017604 2 51206 32.159 32.159 1 2.0181 1.6733 0 35218000 11642000 23575000 12261 1442 4661 4783 19121;19122 19122 GALTGGYYDTR 11 0 1 Unmodified _GALTGGYYDTR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.2847 2 587.280377 1172.5462 80151.25 0.23658 0.00013894 0.43494 0.00025543 0.67152 0.00039437 587.280766437492 592.284670402139 50.183 0.75721 50.183 49.76 50.517 0 222 62 6 0 0 0 0.05694 1 24045 33.744 29.329 1 1.2233 1.0738 0 2512900 1098100 1414800 12262 803 4662 4784 19123 19123 GALTVGITNTVGSSISR 17 0 1 Unmodified _GALTVGITNTVGSSISR_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.954 2 816.949401 1631.88425 70302.96 1.2598 0.0010292 0.44199 0.00036108 1.7018 0.0013903 816.949930058137 821.953642904519 90.904 0.53751 90.904 90.593 91.13 0 155 44 5 0 0 0 3.7023E-07 2 54839 96.734 96.734 1 2.641 2.7064 0 26016000 7591700 18424000 12263 1688 4663 4785 19124;19125 19124 GALTVGITNTVGSSISR 17 0 1 Unmodified _GALTVGITNTVGSSISR_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.9545 2 816.949401 1631.88425 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.845 1 89.845 89.345 90.345 -7.6294E-06 0 0 0 3.2834E-09 1 55509 107.53 84.843 1 12264 1688 4663 4785 19126 19126 GANAVGYTNYPDNVVFK 17 1 0 Unmodified _GANAVGYTNYPDNVVFK_ 0 0 0 A0A024R5C5;P11498 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.9487 2 914.946858 1827.87916 64554.83 0.67057 0.00061354 0.17363 0.00015886 0.8442 0.0007724 914.946342328752 918.954044593587 87.666 0.30132 87.666 87.492 87.794 0 65 22 5 0 0 0 7.4837E-05 1 54057 66.023 59.79 1 2.5316 2.5582 0 13177000 3623500 9553300 12265 176 4664 4786 19127 19127 GAPAAATAPAPTAHK 15 1 0 Unmodified _GAPAAATAPAPTAHK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3569 2 666.356951 1330.69935 74515.64 0.54865 0.0003656 0.11242 7.4913E-05 0.66108 0.00044051 666.357034269392 670.364061772187 20.023 0.53476 20.023 19.859 20.393 0 80 16 10 0 0 0 9.5407E-39 3 6449 223.07 207.81 1 0.88491 1.0202 0 215000000 115620000 99383000 12266 1946 4665 4787 19128;19129;19130 19129 GAPAAATAPAPTAHK 15 1 0 Unmodified _GAPAAATAPAPTAHK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.5739 3 444.573726 1330.69935 90703.89 -0.026243 -1.1667E-05 0.52025 0.00023129 0.494 0.00021962 444.573901657889 447.245463960227 20.024 0.51537 20.024 19.807 20.322 0 66 15 9 0 0 0 0.0084816 1 6499 28.325 23.92 1 0.97402 1.0991 0 134060000 69828000 64237000 12267 1946 4665 4787 19131 19131 GAPAAATAPAPTAHK 15 1 0 Unmodified _GAPAAATAPAPTAHK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.3641 2 666.356951 1330.69935 74371.08 0.37267 0.00024833 -0.045747 -3.0484E-05 0.32692 0.00021785 666.357008879556 670.363898001827 19.876 0.5415 19.876 19.739 20.28 0 123 20 10 0 0 0 2.1255E-30 2 6193 197.73 197.73 1 0.95633 1.1262 0 482350000 246210000 236140000 12268 1946 4665 4787 19132;19133 19132 GAPAAATAPAPTAHK 15 1 0 Unmodified _GAPAAATAPAPTAHK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.245 3 444.573726 1330.69935 90225.78 -0.10229 -4.5473E-05 -0.24532 -0.00010906 -0.3476 -0.00015453 444.573713756819 447.24503158194 19.876 0.42486 19.876 19.739 20.164 0 100 16 10 0 0 0 4.4334E-05 2 6228 79.804 72.635 1 0.87512 1.0228 0 284810000 149660000 135150000 12269 1946 4665 4787 19134;19135 19135 GAPAAATAPAPTAHK 15 1 0 Unmodified _GAPAAATAPAPTAHK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.3569 2 666.356951 1330.69935 74940.37 0.15099 0.00010061 0.13323 8.8777E-05 0.28421 0.00018939 666.357060296287 670.36406640967 21.328 0.46134 21.328 21.191 21.653 0 97 16 11 0 0 0 1.9721E-07 2 6366 144.17 141.71 1 0.62711 0.52501 0 51094000 30742000 20352000 12270 1946 4665 4787 19136;19137 19137 GAPAAATAPAPTAHK 15 1 0 Unmodified _GAPAAATAPAPTAHK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 444.5736 3 444.573726 1330.69935 89763.35 -0.38665 -0.0001719 0.24457 0.00010873 -0.14208 -6.3166E-05 444.573762996217 447.245190668737 21.328 0.32925 21.328 21.207 21.536 1.9073E-06 67 11 9 0 0 0 0.052591 1 6388 15.933 12.056 1 0.54698 0.44334 0 24958000 15180000 9778300 12271 1946 4665 4787 19138 19138 GAPAAATAPAPTAHK 15 1 0 Unmodified _GAPAAATAPAPTAHK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.8597 2 666.356951 1330.69935 74118.54 0.1294 8.6226E-05 0.43091 0.00028714 0.56031 0.00037336 666.3572952117 670.364276253305 21.206 0.58833 21.206 21.059 21.648 1.9073E-06 161 26 11 0 0 0 0.00013235 2 5834 107.03 107.03 1 0.61038 0.50404 0 31265000 18358000 12907000 12272 1946 4665 4787 19139;19140 19140 GAPGQPGTILR 11 0 1 Unmodified _GAPGQPGTILR_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.8037 2 533.803823 1065.59309 84193.02 0.67923 0.00036257 0.1123 5.9944E-05 0.79152 0.00042252 533.803618095879 538.808119609649 45.058 0.44844 45.058 44.818 45.266 -3.8147E-06 127 39 6 0 0 0 0.0018323 1 24272 64.485 51.448 1 0.7839 0.81579 0 21079000 11089000 9989900 12273 680 4666 4788 19141 19141 GAPPSSNIEDFHGLLPK 17 1 0 Unmodified _GAPPSSNIEDFHGLLPK_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;H0Y8T4 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.6475 3 593.640576 1777.8999 77886.26 0.75479 0.00044807 0.77317 0.00045898 1.528 0.00090706 593.640760640997 596.312332978617 88.764 0.94385 88.764 88.364 89.308 7.6294E-06 309 80 5 0 0 0 2.3337E-05 3 54531 62.055 62.055 1 1.5469 1.7418 0 57825000 21266000 36559000 12274 542 4667 4789 19142;19143;19144 19142 GAPPSSNIEDFHGLLPK 17 1 0 Unmodified _GAPPSSNIEDFHGLLPK_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;H0Y8T4 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.6416 3 593.640576 1777.8999 78172.41 0.51824 0.00030765 0.61213 0.00036338 1.1304 0.00067103 593.975251146707 596.312160174698 103.02 0.67725 103.02 102.69 103.37 0 236 44 7 0 0 0 0.021312 2 58425 20.939 20.939 1 1.0828 0.84411 0 12192000 5174100 7018000 12275 542 4667 4789 19145;19146 19146 GAPPSSNIEDFHGLLPK 17 1 0 Unmodified _GAPPSSNIEDFHGLLPK_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;H0Y8T4 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.6412 3 593.640576 1777.8999 79041.39 0.41337 0.00024539 0.54523 0.00032367 0.9586 0.00056906 593.640823342709 596.312141979293 102.77 0.62372 102.77 102.5 103.13 0 240 39 8 0 0 0 0.019472 2 57489 21.359 21.359 1 1.0147 0.83369 0 9618600 4340600 5278100 12276 542 4667 4789 19147;19148 19148 GAPVGGHILSYLLEK 15 1 0 Unmodified _GAPVGGHILSYLLEK_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.2996 3 518.627719 1552.86133 85100.27 0.52885 0.00027427 -0.2633 -0.00013655 0.26555 0.00013772 518.96199124064 521.633342068427 106.7 0.79486 106.7 106.31 107.1 0 224 59 6 0 0 0 0.001196 1 66187 40.801 40.801 1 1.2779 1.2678 0 19175000 8578600 10596000 12277 1088;1189 4668 4790 19149 19149 GAPVGGHILSYLLEK 15 1 0 Unmodified _GAPVGGHILSYLLEK_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.9392 2 777.437941 1552.86133 70704.32 0.75488 0.00058687 -0.036571 -2.8432E-05 0.71831 0.00055844 777.438878572804 781.444987586529 106.71 0.8765 106.71 106.28 107.15 -7.6294E-06 210 65 6 0 0 0 0.018241 1 66313 39.179 39.179 1 2.6669 2.6123 0 21870000 5313000 16557000 12278 1088;1189 4668 4790 19150 19150 GAPVGGHILSYLLEK 15 1 0 Unmodified _GAPVGGHILSYLLEK_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.6284 3 518.627719 1552.86133 84597.43 0.57634 0.00029891 -0.14854 -7.7035E-05 0.42781 0.00022187 518.627629360948 521.298996523025 105.31 0.91091 105.31 104.88 105.79 0 259 68 6 0 0 0 0.0047485 2 66765 32.997 32.997 1 1.1778 1.2808 0 39523000 18359000 21164000 12279 1088;1189 4668 4790 19151;19152 19152 GAPVNISSSDLTGR 14 0 1 Unmodified _GAPVNISSSDLTGR_ 0 0 0 B4DIJ9;Q59FJ7;B4E0G1;A0A024R8X3;H7BYT1;P48730;J3KRM8 B4DIJ9 B4DIJ9 CSNK1D Casein kinase I isoform delta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.3534 2 687.354605 1372.69466 NaN NaN NaN -0.11364 -7.811E-05 NaN NaN NaN NaN 66.046 0.23084 66.046 65.903 66.134 0 0 0 0 0.011225 1 39022 51.252 37.66 1 NaN NaN 0 3896200 3896200 0 12280 263 4669 4791 19153 19153 GAQAAIVVYDITNTDTFAR 19 0 1 Unmodified _GAQAAIVVYDITNTDTFAR_ 0 0 0 A0A024R1U4;P51148;F8VVK3;K7ERI8;K7ERQ8;K7ENY4 A0A024R1U4 A0A024R1U4 RAB5C Ras-related protein Rab-5C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1018.5229 2 1013.51564 2025.01672 NaN NaN NaN 1.5165 0.001537 NaN NaN NaN NaN 113.27 0.21637 113.27 113.17 113.38 0 0 0 0 0.015592 1 73459 38.189 24.761 1 NaN NaN 0 2262900 0 2262900 12281 92 4670 4792 19154 19154 GAQAAIVVYDITNTDTFAR 19 0 1 Unmodified _GAQAAIVVYDITNTDTFAR_ 0 0 0 A0A024R1U4;P51148;F8VVK3;K7ERI8;K7ERQ8;K7ENY4 A0A024R1U4 A0A024R1U4 RAB5C Ras-related protein Rab-5C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1018.5221 2 1013.51564 2025.01672 62824.07 0.47552 0.00048194 0.72771 0.00073754 1.2032 0.0012195 1014.01845397501 1018.52116561508 125.21 0.36806 125.21 125.04 125.41 0 46 14 6 0 0 0 0.012892 1 75172 24.191 24.191 1 0.90152 0.7807 0 1957100 856430 1100700 12282 92 4670 4792 19155 19155 GAQVEEIWSLEPENFEK 17 1 0 Unmodified _GAQVEEIWSLEPENFEK_ 0 0 0 Q5LJA5;Q5LJA9;Q9Y5K5;Q5LJB0;B2RB07 Q5LJA5 Q5LJA5 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1007.4866 2 1002.98109 2003.94764 NaN NaN NaN -1.4519 -0.0014563 NaN NaN NaN NaN 125.04 0.38308 125.04 124.84 125.22 0 0 0 0 0.027228 1 74998 37.998 31.557 1 NaN NaN 0 1407800 0 1407800 12283 1811 4671 4793 19156 19156 GAQVEEIWSLEPENFEK 17 1 0 Unmodified _GAQVEEIWSLEPENFEK_ 0 0 0 Q5LJA5;Q5LJA9;Q9Y5K5;Q5LJB0;B2RB07 Q5LJA5 Q5LJA5 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1006.9857 2 1002.98109 2003.94764 59470.77 0.39792 0.0003991 -1.2281 -0.0012318 -0.83018 -0.00083265 1003.47987925408 1007.48820868208 124.96 0.284 124.96 124.77 125.06 -7.6294E-06 51 13 5 0 0 0 0.00091686 1 74003 44.511 44.511 1 1.044 0.83815 0 2475200 1319800 1155400 12284 1811 4671 4793 19157 19157 GAQYQPILR 9 0 1 Unmodified _GAQYQPILR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.293 2 523.293091 1044.57163 83574.14 0.29209 0.00015285 -0.0056085 -2.9349E-06 0.28648 0.00014991 523.293068663071 528.297176943473 50.785 0.45359 50.785 50.657 51.11 3.8147E-06 135 40 5 0 0 0 0.00023109 1 28059 105.39 105.39 1 0.61344 0.62753 0 34053000 19825000 14227000 12285 222 4672 4794 19158 19158 GAQYQPILR 9 0 1 Unmodified _GAQYQPILR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2929 2 523.293091 1044.57163 82408.76 0.3387 0.00017724 -0.15179 -7.9432E-05 0.1869 9.7806E-05 523.293086707771 528.296938695654 49.466 0.45443 49.466 49.329 49.784 0 109 36 5 0 0 0 0.00030602 1 27813 102.72 78.564 1 0.64985 0.70736 0 28989000 16957000 12032000 12286 222 4672 4794 19159 19159 GASGPQVGNALGSLEPLR 18 0 1 Unmodified _GASGPQVGNALGSLEPLR_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.9611 2 861.9603 1721.90605 67465.7 0.72692 0.00062657 0.32696 0.00028183 1.0539 0.0009084 862.461752313674 866.964614748299 99.108 0.48512 99.108 98.852 99.337 0 172 41 6 0 0 0 9.486E-06 1 62083 80.371 80.371 1 0.75162 0.76685 0 20690000 13877000 6813100 12287 2045 4673 4795 19160 19160 GASGPQVGNALGSLEPLR 18 0 1 Unmodified _GASGPQVGNALGSLEPLR_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 866.9642 2 861.9603 1721.90605 NaN NaN NaN 0.43962 0.00037894 NaN NaN NaN NaN 112.51 0.4295 112.51 112.33 112.76 7.6294E-06 0 0 0 0.00069304 1 65360 55.724 50 1 NaN NaN 0 4624500 0 4624500 12288 2045 4673 4795 19161 19161 GASGPQVGNALGSLEPLR 18 0 1 Unmodified _GASGPQVGNALGSLEPLR_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 867.4663 2 861.9603 1721.90605 66907.58 0.5064 0.0004365 0.26146 0.00022537 0.76786 0.00066187 861.960179732726 867.466592687983 112.37 0.64029 112.37 112.19 112.83 0 136 33 7 0 0 0 2.8823E-05 2 64356 67.095 67.095 1 1.4104 1.1711 0 5866300 2331000 3535200 12289 2045 4673 4795 19162;19163 19163 GASGSFVVVQK 11 1 0 Unmodified _GASGSFVVVQK_ 0 0 0 Q5SSJ5;X6RGJ2;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.8065 2 539.798206 1077.58186 82212.98 0.66462 0.00035876 0.061122 3.2994E-05 0.72575 0.00039176 539.798135175364 543.805220177 47.729 1.2169 47.729 47.304 48.521 0 500 104 9 0 0 0 3.2364E-06 2 25765 111.46 89.927 1 0.8852 1.0445 0 355800000 187320000 168480000 12290 1817 4674 4796 19164;19165 19165 GASGSFVVVQK 11 1 0 Unmodified _GASGSFVVVQK_ 0 0 0 Q5SSJ5;X6RGJ2;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.8068 2 539.798206 1077.58186 80337.07 0.78225 0.00042226 0.11512 6.2141E-05 0.89737 0.0004844 539.798176776511 543.805288237366 46.612 0.81113 46.612 46.382 47.193 0 397 69 8 0 0 0 1.8777E-05 2 25695 105.4 88.885 1 0.91225 1.0741 0 455880000 215480000 240400000 12291 1817 4674 4796 19166;19167 19166 GASGSFVVVQK 11 1 0 Unmodified _GASGSFVVVQK_ 0 0 0 Q5SSJ5;X6RGJ2;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.7984 2 539.798206 1077.58186 81753.07 0.65602 0.00035412 -0.089778 -4.8462E-05 0.56624 0.00030565 539.798116835257 543.805161301661 54.575 1.104 54.575 54.187 55.291 0 520 76 11 0 0 0 0.011983 2 27078 48.091 48.091 1 0.92311 0.77518 0 53127000 27034000 26093000 12292 1817 4674 4796 19168;19169 19169 GASGSFVVVQK 11 1 0 Unmodified _GASGSFVVVQK_ 0 0 0 Q5SSJ5;X6RGJ2;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.8055 2 539.798206 1077.58186 80153.12 0.44576 0.00024062 -0.10323 -5.5726E-05 0.34253 0.0001849 539.798133322535 543.805190707328 54.871 1.1587 54.871 54.457 55.616 0 507 77 9 0 0 0 0.0060749 2 26691 55.064 47.124 1 0.93279 0.78405 0 50409000 26861000 23548000 12293 1817 4674 4796 19170;19171 19170 GASGTFQLK 9 1 0 Unmodified _GASGTFQLK_ 0 0 0 Q5SSJ5;B0QZK4 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.7525 2 454.745442 907.476331 89718.37 0.13173 5.9905E-05 -0.0018478 -8.4029E-07 0.12988 5.9064E-05 454.74540954842 458.752402176144 40.13 0.8475 40.13 39.752 40.599 -3.8147E-06 391 71 8 0 0 0 0.00014497 2 20805 108.46 51.18 1 0.76451 0.8907 0 263410000 152350000 111060000 12294 1817 4675 4797 19172;19173 19172 GASGTFQLK 9 1 0 Unmodified _GASGTFQLK_ 0 0 0 Q5SSJ5;B0QZK4 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.7453 2 454.745442 907.476331 91012.73 0.17183 7.8138E-05 -0.084147 -3.8266E-05 0.087681 3.9873E-05 454.745362910984 458.752352186748 39.109 0.81343 39.109 38.748 39.562 0 402 69 9 0 0 0 0.00012949 2 20553 109.01 48.252 1 0.81659 0.95659 0 313900000 170160000 143740000 12295 1817 4675 4797 19174;19175 19175 GASGTFQLK 9 1 0 Unmodified _GASGTFQLK_ 0 0 0 Q5SSJ5;B0QZK4 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 454.7453 2 454.745442 907.476331 89160.72 0.14681 6.6763E-05 -0.13953 -6.3452E-05 0.0072818 3.3113E-06 454.745383226698 458.752338979516 45.375 1.0167 45.375 45.04 46.057 0 396 75 8 0 0 0 0.0039394 2 21622 70.525 41.149 1 0.9477 0.78676 0 45894000 23026000 22868000 12296 1817 4675 4797 19176;19177 19177 GASGTFQLK 9 1 0 Unmodified _GASGTFQLK_ 0 0 0 Q5SSJ5;B0QZK4 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 454.7453 2 454.745442 907.476331 89338.45 0.24598 0.00011186 -0.26182 -0.00011906 -0.015836 -7.2013E-06 454.745274871629 458.752305223701 45.338 1.036 45.338 44.968 46.004 0 389 68 8 0 0 0 0.020912 2 21023 49.833 24.479 1 0.95736 0.79198 0 32927000 16589000 16338000 12297 1817 4675 4797 19178;19179 19179 GATGATTTIYAVEADGDPNAGFEK 24 1 0 Unmodified _GATGATTTIYAVEADGDPNAGFEK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1179.0505 2 1178.5506 2355.08665 NaN NaN NaN -1.045 -0.0012315 NaN NaN NaN NaN 89.114 0.36929 89.114 88.925 89.294 0 0 0 0 0.0046509 2 54913 35.473 30.489 1 NaN NaN 0 18043000 18043000 0 12298 1366 4676 4798 19180;19181 19181 GATGEPEVMEPALEGTGK 18 1 0 Oxidation (M) _GATGEPEVM(ox)EPALEGTGK_ GATGEPEVM(1)EPALEGTGK GATGEPEVM(97.86)EPALEGTGK 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.4213 2 894.919649 1787.82474 64455.19 0.50639 0.00045318 -0.10944 -9.7944E-05 0.39695 0.00035524 894.919535127541 898.92687413419 59.004 0.72834 59.004 58.649 59.377 0 362 58 8 0 0 0 1.0267E-08 2 33444 97.86 97.86 1 1.4183 1.5774 0 60545000 23229000 37316000 12299 2038 4677 4799 19182;19183 19183 1877 GATGEPEVMEPALEGTGK 18 1 0 Oxidation (M) _GATGEPEVM(ox)EPALEGTGK_ GATGEPEVM(1)EPALEGTGK GATGEPEVM(112.08)EPALEGTGK 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.4298 2 894.919649 1787.82474 64681.11 0.5178 0.00046339 -0.281 -0.00025148 0.2368 0.00021191 894.919602109152 898.926824700396 58.172 0.72239 58.172 57.791 58.513 0 313 55 8 0 0 0 3.8333E-13 2 33659 112.08 112.08 1 1.5155 1.7079 0 60279000 25912000 34367000 12300 2038 4677 4799 19184;19185 19184 1877 GATQQILDEAER 12 0 1 Unmodified _GATQQILDEAER_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3;Q9H369 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.8388 2 665.833505 1329.65246 NaN NaN NaN 0.29892 0.00019903 NaN NaN NaN NaN 59.104 0.47342 59.104 58.828 59.302 0 0 0 0 4.3216E-13 1 33502 120.65 109.82 1 NaN NaN 0 30943000 0 30943000 12301 1255 4678 4800 19186 19186 GATQQILDEAER 12 0 1 Unmodified _GATQQILDEAER_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3;Q9H369 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8383 2 665.833505 1329.65246 NaN NaN NaN 0.17969 0.00011964 NaN NaN NaN NaN 57.94 0.5557 57.94 57.685 58.241 0 0 0 0 1.1939E-28 1 33498 152.54 130.45 1 NaN NaN 0 22828000 0 22828000 12302 1255 4678 4800 19187 19187 GATQQILDEAER 12 0 1 Unmodified _GATQQILDEAER_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3;Q9H369 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 670.8384 2 665.833505 1329.65246 73839.69 0.42499 0.00028298 0.79995 0.00053263 1.2249 0.00081561 665.834388208617 670.838294887281 69.227 0.34892 69.227 69.028 69.377 0 85 22 6 0 0 0 3.7095E-08 1 36301 117.02 112.72 1 1.8035 1.5145 0 4272900 1571400 2701600 12303 1255 4678 4800 19188 19188 GATQQILDEAER 12 0 1 Unmodified _GATQQILDEAER_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3;Q9H369 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.8391 2 665.833505 1329.65246 74157.55 0.49994 0.00033288 1.1841 0.00078841 1.684 0.0011213 665.833839064793 670.83862027977 69.811 0.25521 69.811 69.652 69.907 0 83 17 6 0 0 0 1.2512E-06 1 35872 112.13 107.83 1 1.9533 1.6423 0 4817600 1536600 3281000 12304 1255 4678 4800 19189 19189 GATVLPANTPGNVGSGK 17 1 0 Unmodified _GATVLPANTPGNVGSGK_ 0 0 0 P22059 P22059 P22059 OSBP Oxysterol-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.4171 2 770.409911 1538.80527 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.224 1 55.224 54.724 55.724 0 0 0 0 0.0049965 1 31041 51.013 23.684 1 12305 1505 4679 4801 19190 19190 GATVLPANTPGNVGSGK 17 1 0 Unmodified _GATVLPANTPGNVGSGK_ 0 0 0 P22059 P22059 P22059 OSBP Oxysterol-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.4162 2 770.409911 1538.80527 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.334 1 55.334 54.834 55.834 0 0 0 0 0.0005471 1 31105 59.57 33.948 1 12306 1505 4679 4801 19191 19191 GATVLPANTPGNVGSGK 17 1 0 Unmodified _GATVLPANTPGNVGSGK_ 0 0 0 P22059 P22059 P22059 OSBP Oxysterol-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.4197 2 770.409911 1538.80527 NaN NaN NaN 0.42591 0.00032813 NaN NaN NaN NaN 54.462 0.1828 54.462 54.33 54.513 0 0 0 0 8.0927E-07 1 31114 85.845 63.204 1 NaN NaN 0 3478100 0 3478100 12307 1505 4679 4801 19192 19192 GATYPSEIPK 10 1 0 Unmodified _GATYPSEIPK_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.7841 2 531.776939 1061.53933 85333.66 0.67368 0.00035825 0.26015 0.00013834 0.93383 0.00049659 531.777063587086 535.783906573102 44.75 0.3654 44.75 44.601 44.966 -3.8147E-06 68 26 4 0 0 0 0.033417 1 24486 41.427 27.521 1 2.247 2.2525 0 15827000 4744100 11083000 12308 640 4680 4802 19193 19193 GAVAIADAIR 10 0 1 Unmodified _GAVAIADAIR_ 0 0 0 B4DY16;A0A024R1U0;P46060;B4E0U0;H0Y4Q3 B4DY16 B4DY16 RANGAP1 Ran GTPase-activating protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.7839 2 478.779816 955.545079 NaN NaN NaN 0.18129 8.68E-05 NaN NaN NaN NaN 65.577 0.40186 65.577 65.387 65.789 0 0 0 0 0.0068167 4 38706 66.621 22.174 1 NaN NaN 0 8039400 0 8039400 12309 90 4681 4803 19194;19195;19196;19197 19195 GAVDALAAALAHISGASSFEPR 22 0 1 Unmodified _GAVDALAAALAHISGASSFEPR_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q9NTA9 B4DW97 B4DW97 DDX50;mcdrh;DKFZp761E0323 ATP-dependent RNA helicase DDX50 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.7037 3 704.367515 2110.08072 NaN NaN NaN 0.3068 0.0002161 NaN NaN NaN NaN 132.03 0.23576 132.03 131.93 132.16 -1.5259E-05 0 0 0 0.051019 1 86266 21.865 12.077 1 NaN NaN 0 1890800 1890800 0 12310 416 4682 4804 19198 19198 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.8543 2 669.854241 1337.69393 73842.41 0.83025 0.00055615 -0.30994 -0.00020761 0.52031 0.00034853 669.854116437455 673.861080621298 46.679 0.68442 46.679 46.367 47.051 0 151 27 7 0 0 0 1.4137E-22 2 25168 150.33 128.76 1 1.1729 1.401 0 784730000 386980000 397750000 12311 653 4683 4805 19199;19200 19200 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.9054 3 446.905253 1337.69393 89502.37 0.19389 8.6648E-05 -0.044498 -1.9886E-05 0.14939 6.6762E-05 446.905245961782 449.576628956889 46.749 0.97121 46.749 46.353 47.324 -3.8147E-06 398 88 11 0 0 0 0.00046883 1 25147 39.033 32.129 1 0.90429 1.0794 0 745660000 388810000 356850000 12312 653 4683 4805 19201 19201 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.8622 2 669.854241 1337.69393 NaN NaN NaN -1.302 -0.00087213 NaN NaN NaN NaN 47.391 0.13924 47.391 47.324 47.463 0 0 0 0 0.050358 1 25651 38.634 19.854 1 NaN NaN 0 3666100 0 3666100 12313 653 4683 4805 19202 19202 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.9059 3 446.905253 1337.69393 93395.17 0.47392 0.0002118 -0.099246 -4.4354E-05 0.37467 0.00016744 446.905026484739 449.57682912459 44.02 0.52288 44.02 43.735 44.258 0 128 45 5 0 0 0 0.012388 1 24015 18.179 12.519 1 1.0506 1.0681 0 30210000 16326000 13885000 12314 653 4683 4805 19203 19203 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.8539 2 669.854241 1337.69393 73691.38 0.69842 0.00046784 -0.055323 -3.7058E-05 0.6431 0.00043078 669.854309720725 673.861246231963 45.395 0.79399 45.395 45.098 45.892 0 467 69 10 0 0 0 1.9177E-06 2 24778 107.03 88.691 1 0.93633 1.1056 0 1090200000 559000000 531200000 12315 653 4683 4805 19204;19205 19205 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.5766 3 446.905253 1337.69393 88910.49 0.19506 8.7175E-05 0.5582 0.00024946 0.75327 0.00033664 446.905503822327 449.576916859442 45.379 0.97466 45.379 45.098 46.072 0 511 85 10 0 0 0 0.00046206 2 24774 40.278 40.278 1 0.96855 1.1428 0 874720000 438980000 435740000 12316 653 4683 4805 19206;19207 19206 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.8619 2 669.854241 1337.69393 73269.94 0.61102 0.00040929 -0.33509 -0.00022446 0.27592 0.00018483 669.854089649196 673.861069173809 53.781 0.9929 53.781 53.432 54.425 -3.8147E-06 464 72 10 0 0 0 3.4724E-14 2 26667 126.76 113 1 0.92626 0.79726 0 92152000 48266000 43886000 12317 653 4683 4805 19208;19209 19208 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.855 2 669.854241 1337.69393 74633.75 0.43071 0.00028851 0.092124 6.171E-05 0.52283 0.00035022 669.854318924676 673.861361188952 54.093 1.0667 54.093 53.771 54.838 0 506 79 11 0 0 0 4.427E-05 2 26300 93.959 77.706 1 0.94086 0.79958 0 75584000 38225000 37359000 12318 653 4683 4805 19210;19211 19211 GAVEAELDPVEYTLR 15 0 1 Unmodified _GAVEAELDPVEYTLR_ 0 0 0 C9JYM0;O75817 C9JYM0 C9JYM0 POP7 Ribonuclease P protein subunit p20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.9278 2 831.422684 1660.83082 71251.3 0.97157 0.00080779 -0.49522 -0.00041174 0.47635 0.00039605 831.422481740691 836.927801259747 104.64 0.41595 104.64 104.43 104.85 -7.6294E-06 93 32 5 0 0 0 0.0058695 1 66324 36.679 31.463 1 0.91831 0.91334 0 8298000 4387000 3911100 12319 1144 4684 4806 19212 19212 GAVEAELDPVEYTLR 15 0 1 Unmodified _GAVEAELDPVEYTLR_ 0 0 0 C9JYM0;O75817 C9JYM0 C9JYM0 POP7 Ribonuclease P protein subunit p20 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.4281 2 831.422684 1660.83082 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.53 1 104.53 104.03 105.03 7.6294E-06 0 0 0 0.0014864 1 66246 65.395 42.516 1 12320 1144 4684 4806 19213 19213 GAVEALAAALAHISGATSVDQR 22 0 1 Unmodified _GAVEALAAALAHISGATSVDQR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3763 3 703.37467 2107.10218 71989.41 0.92027 0.0006473 0.05829 4.1E-05 0.97856 0.0006883 703.708954738422 707.044990467388 126.1 1.0156 126.1 125.52 126.54 7.6294E-06 469 74 10 0 0 0 3.3482E-09 2 81911 77.847 77.847 1 1.1158 1.2313 0 55561000 25798000 29763000 12321 2065 4685 4807 19214;19215 19215 GAVEALAAALAHISGATSVDQR 22 0 1 Unmodified _GAVEALAAALAHISGATSVDQR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.0608 2 1054.55837 2107.10218 60208.95 0.7264 0.00076603 -0.33405 -0.00035228 0.39235 0.00041375 1054.55832076376 1060.06326215492 126.07 0.40423 126.07 125.88 126.29 0 147 30 7 0 0 0 3.1729E-11 3 81969 91.207 91.207 1 1.0319 1.0778 0 10621000 5001200 5619400 12322 2065 4685 4807 19216;19217;19218 19218 GAVEALAAALAHISGATSVDQR 22 0 1 Unmodified _GAVEALAAALAHISGATSVDQR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.0457 3 703.37467 2107.10218 72463.54 1.1059 0.00077786 -0.16297 -0.00011463 0.94294 0.00066324 703.708867126522 706.710586114862 126.92 1.269 126.92 126.39 127.66 0 469 82 11 0 0 0 2.7356E-22 4 82398 89.511 89.511 1 1.0791 1.1428 0 41336000 18900000 22436000 12323 2065 4685 4807 19219;19220;19221;19222 19219 GAVEALAAALAHISGATSVDQR 22 0 1 Unmodified _GAVEALAAALAHISGATSVDQR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.0468 3 703.37467 2107.10218 72069.68 0.79403 0.0005585 -0.31258 -0.00021986 0.48145 0.00033864 703.374658091293 707.045308063812 132.98 0.26227 132.98 132.83 133.1 0 26 10 5 0 0 0 7.3168E-10 2 86972 75.112 75.112 1 0.95779 0.99395 0 5655900 2802400 2853500 12324 2065 4685 4807 19223;19224 19224 GAVEALAAALAHISGATSVDQR 22 0 1 Unmodified _GAVEALAAALAHISGATSVDQR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.0582 2 1054.55837 2107.10218 NaN NaN NaN 0.094162 9.93E-05 NaN NaN NaN NaN 126.95 0.69232 126.95 126.62 127.31 0 0 0 0 0.0082344 1 82491 36.445 27.158 1 NaN NaN 0 4022200 4022200 0 12325 2065 4685 4807 19225 19225 GAVEALAAALAHISGATSVDQR 22 0 1 Unmodified _GAVEALAAALAHISGATSVDQR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.7092 3 703.37467 2107.10218 71537.13 0.9617 0.00067644 -0.011511 -8.0962E-06 0.95019 0.00066834 703.375085167447 707.044937502247 125.57 0.80653 125.57 125.14 125.95 7.6294E-06 328 53 10 0 0 0 4.2972E-12 2 83586 84.181 84.181 1 1.0896 1.2544 0 74161000 35832000 38329000 12326 2065 4685 4807 19226;19227 19227 GAVEALAAALAHISGATSVDQR 22 0 1 Unmodified _GAVEALAAALAHISGATSVDQR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1055.0598 2 1054.55837 2107.10218 59766.71 0.84194 0.00088788 -0.33866 -0.00035713 0.50329 0.00053074 1055.05967267774 1059.56197845707 125.54 0.57201 125.54 125.34 125.91 0 166 38 8 0 0 0 4.3468E-11 3 83609 87.932 87.932 1 1.0743 1.0768 0 18118000 8380700 9737700 12327 2065 4685 4807 19228;19229;19230 19230 GAVEALAAALAHISGATSVDQR 22 0 1 Unmodified _GAVEALAAALAHISGATSVDQR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.7095 3 703.37467 2107.10218 71545.32 1.0081 0.00070909 -0.06113 -4.2997E-05 0.94699 0.00066609 703.708898375171 706.710749215359 126.09 1.1652 126.09 125.91 127.07 0 529 71 11 0 0 0 1.9364E-47 4 84160 121.47 121.47 1 1.0969 1.256 0 85110000 40987000 44122000 12328 2065 4685 4807 19231;19232;19233;19234 19232 GAVEALAAALAHISGATSVDQR 22 0 1 Unmodified _GAVEALAAALAHISGATSVDQR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1060.0641 2 1054.55837 2107.10218 59966.59 0.88221 0.00093035 -0.69183 -0.00072958 0.19038 0.00020077 1055.05942904285 1060.06220358413 126.08 0.85298 126.08 125.88 126.73 0 213 51 6 0 0 0 4.1407E-11 2 84154 88.507 88.507 1 0.85555 0.90882 0 24092000 12333000 11759000 12329 2065 4685 4807 19235;19236 19236 GAVEALAAALAHISGATSVDQR 22 0 1 Unmodified _GAVEALAAALAHISGATSVDQR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.0457 3 703.37467 2107.10218 72148.74 0.82967 0.00058357 -0.57906 -0.00040729 0.25062 0.00017628 703.708707887068 706.710358381227 134.72 0.34354 134.72 134.56 134.9 0 31 7 9 0 0 0 4.9347E-87 2 82422 168.78 168.78 1 1.1869 1.0314 0 253990000 117390000 136600000 12330 2065 4685 4807 19237;19238 19237 GAVEALAAALAHISGATSVDQR 22 0 1 Unmodified _GAVEALAAALAHISGATSVDQR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 707.0457 3 703.37467 2107.10218 71084.2 0.86293 0.00060697 -0.069642 -4.8984E-05 0.79329 0.00055798 703.709027696701 707.044718010541 134.68 0.36754 134.68 134.53 134.9 0 31 8 8 0 0 0 3.1544E-60 2 81483 139.26 139.26 1 1.1668 1.0194 0 290880000 132790000 158080000 12331 2065 4685 4807 19239;19240 19239 GAVGALLVYDIAK 13 1 0 Unmodified _GAVGALLVYDIAK_ 0 0 0 H3BMH2;H3BSC1;A0A024R5Z8;B4DMN1;P62491;Q15907 H3BMH2 H3BMH2 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.3832 2 645.37682 1288.73909 80348.09 1.0405 0.00067148 0.088178 5.6908E-05 1.1286 0.00072839 645.376954270305 649.383474935425 111.78 0.39648 111.78 111.63 112.03 0 65 29 4 0 0 0 0.00030291 3 70569 65.5 54.671 1 1.8331 1.8207 0 8112800 1522300 6590500 12332 194 4686 4808 19241;19242;19243 19242 GAVGALLVYDIAK 13 1 0 Unmodified _GAVGALLVYDIAK_ 0 0 0 H3BMH2;H3BSC1;A0A024R5Z8;B4DMN1;P62491;Q15907 H3BMH2 H3BMH2 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.8847 2 645.37682 1288.73909 75946.9 0.83752 0.00054052 -0.44906 -0.00028982 0.38846 0.0002507 645.377313685857 649.383273048775 111.14 0.43201 111.14 110.99 111.42 0 60 30 4 0 0 0 0.00036872 1 71594 62.303 51.151 1 2.0264 2.0124 0 5798700 2267200 3531500 12333 194 4686 4808 19244 19244 GAVIVVSHDAR 11 0 1 Unmodified _GAVIVVSHDAR_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q59F96;H0YGW7;A0A0G2JIC2 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.314 2 562.314554 1122.61456 81404.67 0.45699 0.00025697 0.00759 4.268E-06 0.46458 0.00026124 562.314281529566 567.318682174901 28.382 0.41597 28.382 28.196 28.612 0 118 27 6 0 0 0 4.6677E-13 2 13328 148.52 122.14 1 0.81107 0.90289 0 79167000 44322000 34845000 12334 1926 4687 4809 19245;19246 19246 GAVIVVSHDAR 11 0 1 Unmodified _GAVIVVSHDAR_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q59F96;H0YGW7;A0A0G2JIC2 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.3192 2 562.314554 1122.61456 79996.43 0.27503 0.00015466 -0.14531 -8.1713E-05 0.12972 7.2943E-05 562.314712230101 567.318510419458 27.638 0.47467 27.638 27.32 27.795 0 92 24 6 0 0 0 7.3902E-08 2 12831 113.62 79.369 1 0.76369 0.86867 0 124270000 74208000 50064000 12335 1926 4687 4809 19247;19248 19247 GAVIVVSHDAR 11 0 1 Unmodified _GAVIVVSHDAR_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q59F96;H0YGW7;A0A0G2JIC2 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.3145 2 562.314554 1122.61456 78134.45 0.39339 0.00022121 -0.067898 -3.818E-05 0.32549 0.00018303 562.314410240423 567.318601851498 31.741 0.38604 31.741 31.572 31.958 1.9073E-06 105 20 7 0 0 0 0.00036511 2 13480 84.213 52.278 1 0.5762 0.47316 0 12031000 7558800 4471800 12336 1926 4687 4809 19249;19250 19250 GAVIVVSHDAR 11 0 1 Unmodified _GAVIVVSHDAR_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q59F96;H0YGW7;A0A0G2JIC2 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.3148 2 562.314554 1122.61456 80317.89 0.55762 0.00031356 -0.72911 -0.00040999 -0.1715 -9.6436E-05 562.314147354169 567.318388088658 31.7 0.46379 31.7 31.503 31.967 1.9073E-06 129 25 7 0 0 0 0.002424 2 13028 61.65 38.91 1 0.66368 0.54386 0 8909600 5413300 3496300 12337 1926 4687 4809 19251;19252 19252 GAVVGIDLGTTNSCVAVMEGK 21 1 0 Oxidation (M) _GAVVGIDLGTTNSCVAVM(ox)EGK_ GAVVGIDLGTTNSCVAVM(1)EGK GAVVGIDLGTTNSCVAVM(67.12)EGK 0 1 0 B7Z4V2;V9HW84;P38646;Q8N1C8 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1052.0261 2 1047.51392 2093.01329 NaN NaN NaN -1.0774 -0.0011286 NaN NaN NaN NaN 92.91 0.19546 92.91 92.786 92.982 -7.6294E-06 0 0 0 1.5585E-07 1 57578 67.115 54.755 1 NaN NaN 0 4439900 0 4439900 12338 1092 4688 4810 19253 19253 835 GAVYSMVEFNGK 12 1 0 Oxidation (M) _GAVYSM(ox)VEFNGK_ GAVYSM(1)VEFNGK GAVYSM(72.33)VEFNGK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.3184 2 659.31082 1316.60709 NaN NaN NaN -0.14733 -9.7139E-05 NaN NaN NaN NaN 56.62 0.43945 56.62 56.376 56.815 0 0 0 0 0.00060438 1 32513 72.325 72.325 1 NaN NaN 0 12456000 0 12456000 12339 1770 4689 4811 19254 19254 1636 GAYDIFLNAK 10 1 0 Unmodified _GAYDIFLNAK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.2925 2 556.292756 1110.57096 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.643 1 91.643 91.143 92.143 -7.6294E-06 0 0 0 0.036356 1 55506 48.283 34.28 1 12340 1207 4690 4812 19255 19255 GAYDIFLNAK 10 1 0 Unmodified _GAYDIFLNAK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.3 2 556.292756 1110.57096 91503.62 0.90022 0.00050078 -0.86484 -0.00048111 0.035375 1.9679E-05 556.292320067729 560.29961678176 90.828 0.56169 90.828 90.462 91.024 0 95 43 5 0 0 0 0.019072 2 56187 47.198 36.784 1 1.9183 1.9369 0 8248900 2881400 5367400 12341 1207 4690 4812 19256;19257 19256 GAYPIIFTAWK 11 1 0 Unmodified _GAYPIIFTAWK_ 0 0 0 Q6NXE6;F5H2X2;F5H2K4;F5GWV0;F5H4P3;B4E1N1;Q68CW5;F5H6J3 Q6NXE6 Q6NXE6 ARMC6;DKFZp762A1314 Armadillo repeat-containing protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8475 2 633.847699 1265.68084 NaN NaN NaN -0.28006 -0.00017751 NaN NaN NaN NaN 115.9 0.33028 115.9 115.8 116.13 0 0 0 0 0.015028 2 75749 54.608 44.084 1 NaN NaN 0 2872200 2872200 0 12342 1848 4691 4813 19258;19259 19259 GCAFAQFMTQEAAQK 15 1 0 Unmodified _GCAFAQFMTQEAAQK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.8908 2 844.381982 1686.74941 68625.7 0.47084 0.00039757 0.0033413 2.8213E-06 0.47418 0.00040039 844.883831171711 848.388824425759 102 0.34853 102 101.8 102.14 -7.6294E-06 69 26 4 0 0 0 0.002921 1 56977 43.544 43.544 1 1.3253 1.0444 0 2292200 873300 1418900 12343 214 4692 4814 19260 19260 GCAFVTFTTR 10 0 1 Unmodified _GCAFVTFTTR_ 0 0 0 G5EA30;Q92879 G5EA30 G5EA30 CELF1 CUGBP Elav-like family member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.2859 2 580.281866 1158.54918 84333.77 0.64223 0.00037268 -0.64204 -0.00037256 0.00019707 1.1436E-07 580.281256838685 585.285688519495 75.779 0.39437 75.779 75.513 75.907 0 87 34 4 0 0 0 0.00095588 1 44601 78.516 78.516 1 2.3023 2.2901 0 8508700 3298300 5210400 12344 1278 4693 4815 19261 19261 GCALQCAILSPAFK 14 1 0 Unmodified _GCALQCAILSPAFK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72;B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2;O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;B4DT47;B4DIZ3;B4DUS3;B4E354;B4E0H6 A0A024RDQ0;B3KNM0;O14992 A0A024RDQ0 HSPH1;HSPA4L;HS24/p52;HSPA4;HEL-S-5a Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L;Heat shock 70 kDa protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.3961 2 768.389079 1534.7636 NaN NaN NaN -0.82368 -0.0006329 NaN NaN NaN NaN 102.77 0.62185 102.77 102.45 103.07 0 0 0 0 0.00087053 1 63218 75.819 58.794 1 NaN NaN 0 8754300 0 8754300 12345 390;624;404 4694 4816 19262 19262 GCALQCAILSPAFK 14 1 0 Unmodified _GCALQCAILSPAFK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72;B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2;O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;B4DT47;B4DIZ3;B4DUS3;B4E354;B4E0H6 A0A024RDQ0;B3KNM0;O14992 A0A024RDQ0 HSPH1;HSPA4L;HS24/p52;HSPA4;HEL-S-5a Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L;Heat shock 70 kDa protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.8979 2 768.389079 1534.7636 NaN NaN NaN -0.091951 -7.0654E-05 NaN NaN NaN NaN 101.96 0.59917 101.96 101.69 102.29 0 0 0 0 9.2756E-05 1 64223 89.548 77.954 1 NaN NaN 0 14642000 0 14642000 12346 390;624;404 4694 4816 19263 19263 GCALQCAILSPAFK 14 1 0 Unmodified _GCALQCAILSPAFK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72;B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2;O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;B4DT47;B4DIZ3;B4DUS3;B4E354;B4E0H6 A0A024RDQ0;B3KNM0;O14992 A0A024RDQ0 HSPH1;HSPA4L;HS24/p52;HSPA4;HEL-S-5a Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L;Heat shock 70 kDa protein 4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 768.8904 2 768.389079 1534.7636 NaN NaN NaN -0.52436 -0.00040291 NaN NaN NaN NaN 114.89 0.36719 114.89 114.71 115.08 0 0 0 0 0.00053133 1 67229 78.653 65.061 1 NaN NaN 0 2251200 2251200 0 12347 390;624;404 4694 4816 19264 19264 GCALQCAILSPAFK 14 1 0 Unmodified _GCALQCAILSPAFK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72;B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2;O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;B4DT47;B4DIZ3;B4DUS3;B4E354;B4E0H6 A0A024RDQ0;B3KNM0;O14992 A0A024RDQ0 HSPH1;HSPA4L;HS24/p52;HSPA4;HEL-S-5a Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L;Heat shock 70 kDa protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.8919 2 768.389079 1534.7636 69581.12 0.86611 0.00066551 -0.35374 -0.00027181 0.51237 0.0003937 768.890319928049 772.395800922803 114.75 0.57036 114.75 114.52 115.09 0 99 25 7 0 0 0 0.0007398 2 66197 58.676 49.244 1 1.225 1.0054 0 5266600 2396700 2869900 12348 390;624;404 4694 4816 19265;19266 19266 GCAVVEFK 8 1 0 Unmodified _GCAVVEFK_ 0 0 0 P52272;Q59ES8;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYL3 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.2353 2 455.228571 908.442588 NaN NaN NaN -0.14727 -6.7043E-05 NaN NaN NaN NaN 45.935 0.88215 45.935 45.578 46.46 0 0 0 0 0.017319 1 24674 67.032 52.256 1 NaN NaN 0 32280000 0 32280000 12349 1599 4695 4817 19267 19267 GCAVVEFK 8 1 0 Unmodified _GCAVVEFK_ 0 0 0 P52272;Q59ES8;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYL3 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2282 2 455.228571 908.442588 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.753 1 45.753 45.253 46.253 -3.8147E-06 0 0 0 0.046812 1 24652 55.676 35.754 1 12350 1599 4695 4817 19268 19268 GCGTVLLSGPR 11 0 1 Unmodified _GCGTVLLSGPR_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.7953 2 558.79514 1115.57573 78346.93 0.48509 0.00027106 -0.0021083 -1.1781E-06 0.48298 0.00026989 558.795171090621 563.79928325865 54.825 1.617 54.825 54.045 55.662 0 688 146 8 0 0 0 5.5312E-13 4 30704 148.14 132.26 1 0.85891 1.0158 0 284950000 162010000 122940000 12351 16 4696 4818 19269;19270;19271;19272 19270 GCGTVLLSGPR 11 0 1 Unmodified _GCGTVLLSGPR_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.7994 2 558.79514 1115.57573 77610.4 0.43765 0.00024456 -0.20446 -0.00011425 0.2332 0.00013031 558.795038802878 563.799144964713 53.553 1.7844 53.553 52.815 54.6 3.8147E-06 747 162 8 0 0 0 0.00015639 4 30814 94.692 83.884 1 0.86663 0.99904 0 228550000 123870000 104680000 12352 16 4696 4818 19273;19274;19275;19276 19276 GCGTVLLSGPR 11 0 1 Unmodified _GCGTVLLSGPR_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.7952 2 558.79514 1115.57573 78881.13 0.36087 0.00020165 -0.14178 -7.9229E-05 0.21908 0.00012242 558.79511660054 563.79919826038 62.538 1.4156 62.538 62.161 63.576 0 673 122 9 0 0 0 0.00046539 4 32419 76.345 62.208 1 0.88889 0.75857 0 37500000 18498000 19002000 12353 16 4696 4818 19277;19278;19279;19280 19279 GCGTVLLSGPR 11 0 1 Unmodified _GCGTVLLSGPR_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.7952 2 558.79514 1115.57573 79650.6 0.36289 0.00020278 -0.40301 -0.0002252 -0.040118 -2.2418E-05 558.794955469421 563.799118225265 63.112 1.8658 63.112 62.58 64.446 0 700 158 7 0 0 0 0.00093586 3 31980 71.349 63.129 1 0.8735 0.76197 0 26937000 13635000 13302000 12354 16 4696 4818 19281;19282;19283 19282 GCHLLVATPGR 11 0 1 Unmodified _GCHLLVATPGR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.5493 3 394.213364 1179.61826 96164 0.41789 0.00016474 -0.038222 -1.5067E-05 0.37967 0.00014967 394.213234828292 397.54932780244 40.999 0.46352 40.999 40.803 41.267 0 156 37 7 0 0 0 0.00019497 1 21471 66.19 59.53 1 1.3983 1.5016 0 46838000 17624000 29214000 12355 522 4697 4819 19284 19284 GCHLLVATPGR 11 0 1 Unmodified _GCHLLVATPGR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.817 2 590.816407 1179.61826 78781.78 0.95209 0.00056251 -0.12077 -7.1354E-05 0.83132 0.00049115 590.816386239366 595.82028473673 41.024 0.2824 41.024 40.846 41.128 0 92 22 6 0 0 0 0.00016522 1 21529 94.309 88.962 1 1.6235 1.6235 0 16457000 6879600 9577500 12356 522 4697 4819 19285 19285 GCHLLVATPGR 11 0 1 Unmodified _GCHLLVATPGR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.5495 3 394.213364 1179.61826 95217.85 0.33476 0.00013196 -0.069553 -2.7419E-05 0.2652 0.00010455 394.213315867268 397.549349402505 39.356 0.54629 39.356 39.202 39.749 3.8147E-06 165 46 6 0 0 0 0.0025529 1 20827 39.918 33.03 1 1.6328 1.8715 0 82859000 36629000 46230000 12357 522 4697 4819 19286 19286 GCHLLVATPGR 11 0 1 Unmodified _GCHLLVATPGR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8206 2 590.816407 1179.61826 NaN NaN NaN 0.13334 7.8782E-05 NaN NaN NaN NaN 39.364 0.37937 39.364 39.243 39.622 0 0 0 0 0.00012718 1 20809 92.838 85.148 1 NaN NaN 0 35994000 0 35994000 12358 522 4697 4819 19287 19287 GCHLLVATPGR 11 0 1 Unmodified _GCHLLVATPGR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.8214 2 590.816407 1179.61826 80805.96 0.35984 0.0002126 0.42044 0.00024841 0.78029 0.00046101 590.816698013498 595.820866095939 46.321 0.46677 46.321 46.132 46.599 0 91 31 4 0 0 0 0.0017357 2 22255 65.224 65.224 1 1.2595 1.1147 0 1503300 717180 786100 12359 522 4697 4819 19288;19289 19288 GCHLLVATPGR 11 0 1 Unmodified _GCHLLVATPGR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.8207 2 590.816407 1179.61826 80895.73 0.41965 0.00024794 -0.40746 -0.00024073 0.012191 7.2024E-06 590.816261584053 595.820517455848 46.152 0.63387 46.152 45.875 46.509 0 126 41 4 0 0 0 0.023549 1 21682 42.19 42.19 1 1.4627 1.2668 0 1212700 435260 777460 12360 522 4697 4819 19290 19290 GCIVDANLSVLNLVIVK 17 1 0 Unmodified _GCIVDANLSVLNLVIVK_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 918.5333 2 914.024054 1826.03356 63237.65 0.35883 0.00032798 0.24357 0.00022263 0.6024 0.00055061 914.526165435129 918.533035163415 133.47 0.26758 133.47 133.32 133.59 0 56 6 13 0 0 0 2.8392E-25 3 87493 144.47 136.37 1 0.77063 0.91261 0 448410000 254440000 193970000 12361 649;648 4698 4820 19291;19292;19293 19293 GCIVDANLSVLNLVIVK 17 1 0 Unmodified _GCIVDANLSVLNLVIVK_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 914.5256 2 914.024054 1826.03356 63575.42 0.61872 0.00056553 -0.32121 -0.00029359 0.29752 0.00027194 914.525360853474 918.031051904968 143.53 1.3307 143.53 143.12 144.45 0 780 141 9 0 0 0 6.5956E-18 2 90824 128.28 128.28 1 0.78378 0.78321 0 9748500 5781700 3966900 12362 649;648 4698 4820 19294;19295 19294 GCIVDANLSVLNLVIVK 17 1 0 Unmodified _GCIVDANLSVLNLVIVK_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.5264 2 914.024054 1826.03356 63056 0.38253 0.00034964 0.35985 0.00032891 0.74238 0.00067855 914.526382514992 918.031690258051 133.44 0.44081 133.44 133.19 133.63 0 81 10 12 0 0 0 1.6016E-81 2 89669 205.46 205.46 1 0.8688 1.0214 0 365050000 209850000 155200000 12363 649;648 4698 4820 19296;19297 19296 GCIVDANLSVLNLVIVK 17 1 0 Unmodified _GCIVDANLSVLNLVIVK_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.0245 2 914.024054 1826.03356 63182.4 0.14026 0.0001282 0.38857 0.00035516 0.52883 0.00048336 914.024506634121 918.533119965006 143.42 1.5113 143.42 142.55 144.06 0 797 164 8 0 0 0 1.8715E-57 2 92328 184.03 184.03 1 0.76617 0.78012 0 12367000 6948500 5418700 12364 649;648 4698 4820 19298;19299 19299 GCIVDANLSVLNLVIVK 17 1 0 Unmodified _GCIVDANLSVLNLVIVK_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.0235 2 914.024054 1826.03356 NaN NaN NaN NaN NaN NaN NaN NaN NaN 144.09 1 144.09 143.59 144.59 0 0 0 0 0.0013748 1 92526 56.225 42.319 1 12365 649;648 4698 4820 19300 19300 GCIVDANLSVLNLVIVK 17 1 0 Unmodified _GCIVDANLSVLNLVIVK_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 918.5335 2 914.024054 1826.03356 62121.64 0.64497 0.00058952 0.12172 0.00011125 0.76669 0.00070078 914.525826302188 918.532763495246 134.89 0.3884 134.89 134.7 135.09 0 41 8 14 0 0 0 1.7915E-81 2 82606 204.49 204.49 1 1.4817 1.3056 0 256290000 104800000 151490000 12366 649;648 4698 4820 19301;19302 19301 GCIVDANLSVLNLVIVK 17 1 0 Unmodified _GCIVDANLSVLNLVIVK_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 914.5259 2 914.024054 1826.03356 64143.19 0.71755 0.00065586 -0.26614 -0.00024325 0.45141 0.0004126 914.525631312509 918.030938699952 142.98 0.36929 142.98 142.66 143.03 1.5259E-05 230 40 9 0 0 0 0.0012062 1 84746 42.475 42.475 1 1.5113 1.2384 0 2450900 1012800 1438000 12367 649;648 4698 4820 19303 19303 GCIVDANLSVLNLVIVK 17 1 0 Unmodified _GCIVDANLSVLNLVIVK_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 914.5262 2 914.024054 1826.03356 62134.75 0.80762 0.00073818 0.32748 0.00029933 1.1351 0.0010375 914.525720739177 918.03169102499 134.86 0.28653 134.86 134.66 134.95 0 29 5 12 0 0 0 6.8556E-127 2 81668 243.11 243.11 1 1.4638 1.2732 0 334710000 138660000 196050000 12368 649;648 4698 4820 19304;19305 19305 GCIVDANLSVLNLVIVK 17 1 0 Unmodified _GCIVDANLSVLNLVIVK_ 0 0 0 Q96DV6;A2A3R6;P62753;Q9BZU1;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 918.0327 2 914.024054 1826.03356 63600.18 0.73788 0.00067444 -0.35727 -0.00032656 0.38061 0.00034788 914.525240630643 918.031170999281 142.84 0.32947 142.84 142.61 142.94 0 165 35 7 0 0 0 0.0029783 1 83955 36.284 36.284 1 1.4457 1.1435 0 3189600 1280500 1909100 12369 649;648 4698 4820 19306 19306 GCLFYGPPGTGK 12 1 0 Unmodified _GCLFYGPPGTGK_ 0 0 0 A0A024R9G7;Q6PL18;Q9ULI0 A0A024R9G7;Q9ULI0 A0A024R9G7 ATAD2;ATAD2B ATPase family AAA domain-containing protein 2;ATPase family AAA domain-containing protein 2B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.3105 2 627.302798 1252.59104 NaN NaN NaN 0.15571 9.768E-05 NaN NaN NaN NaN 79.442 0.4369 79.442 79.202 79.639 0 0 0 0 0.041638 1 42866 43.282 27.079 1 NaN NaN 0 985410 0 985410 12370 278;2108 4699 4821 19307 19307 GCLVTASADK 10 1 0 Unmodified _GCLVTASADK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.2518 2 511.252774 1020.491 85608.14 0.2899 0.00014821 -0.71694 -0.00036654 -0.42704 -0.00021832 511.252433593098 515.259516857958 26.622 0.44852 26.622 26.387 26.835 -1.9073E-06 88 27 5 0 0 0 0.0035438 1 11939 64.04 29.232 1 0.86548 0.86565 0 18801000 10778000 8023200 12371 339 4700 4822 19308 19308 GCLVTASADK 10 1 0 Unmodified _GCLVTASADK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.2533 2 511.252774 1020.491 87269.31 0.38748 0.0001981 0.096252 4.9209E-05 0.48373 0.00024731 511.25273820884 515.259760118488 26.202 0.31068 26.202 26.063 26.374 0 59 15 5 0 0 0 2.4698E-05 1 11659 99.802 42.243 1 0.74815 0.76667 0 25529000 14502000 11026000 12372 339 4700 4822 19309 19309 GCLVTASADK 10 1 0 Unmodified _GCLVTASADK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.2597 2 511.252774 1020.491 86512.47 0.0064747 3.3102E-06 -0.49834 -0.00025478 -0.49186 -0.00025147 511.252511090138 515.259809457647 29.571 0.50211 29.571 29.34 29.843 0 110 30 5 0 0 0 0.038896 1 11586 39.222 4.4144 1 1.3848 1.093 0 3222300 1463800 1758500 12373 339 4700 4822 19310 19310 GCPVNTEPSGPTCEK 15 1 0 Unmodified _GCPVNTEPSGPTCEK_ 0 0 0 A0A024RBY9;P53701 A0A024RBY9 A0A024RBY9 HCCS Cytochrome c-type heme lyase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.8524 2 816.853254 1631.69196 69690.61 0.72291 0.00059051 -0.52376 -0.00042784 0.19915 0.00016267 817.354545922616 820.860080312027 26.324 0.24531 26.324 26.191 26.436 -1.9073E-06 61 16 6 0 0 0 4.4241E-05 1 11754 85.813 83.673 1 0.75443 0.76733 0 10326000 4624000 5701800 12374 350 4701 4823 19311 19311 GCPVNTEPSGPTCEK 15 1 0 Unmodified _GCPVNTEPSGPTCEK_ 0 0 0 A0A024RBY9;P53701 A0A024RBY9 A0A024RBY9 HCCS Cytochrome c-type heme lyase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.8533 2 816.853254 1631.69196 68031.69 0.98913 0.00080797 -0.22257 -0.00018181 0.76656 0.00062617 816.85314847929 820.86037309226 25.958 0.22206 25.958 25.862 26.084 0 43 12 5 0 0 0 0.00022046 2 11525 69.346 67.751 1 1.0411 1.073 0 11549000 6656800 4892200 12375 350 4701 4823 19312;19313 19313 GCQAEADRAEVSR 13 0 2 Unmodified _GCQAEADRAEVSR_ 0 0 1 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2287 3 483.556406 1447.64739 87097.16 -0.2039 -9.8597E-05 0.39799 0.00019245 0.19409 9.3853E-05 483.556458223962 490.228639566337 16.103 0.33312 16.103 15.878 16.211 0 82 24 6 0 0 0 0.031317 1 3351 27.409 27.223 1 1.1922 1.1657 0 2326100 930770 1395300 12376 907 4702 4824 19314 19314 GCQAEADRAEVSR 13 0 2 Unmodified _GCQAEADRAEVSR_ 0 0 1 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 490.2286 3 483.556406 1447.64739 84646.71 -0.071782 -3.4711E-05 -0.018083 -8.744E-06 -0.089865 -4.3455E-05 483.556505509013 490.228564113823 17.282 0.22757 17.282 17.179 17.407 0 28 10 4 0 0 0 0.032448 1 3746 26.969 26.969 1 0.98028 0.89741 0 1618200 877030 741170 12377 907 4702 4824 19315 19315 GCTATLGNFAK 11 1 0 Unmodified _GCTATLGNFAK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.2799 2 570.279323 1138.54409 78806.55 0.55164 0.00031459 0.74928 0.0004273 1.3009 0.00074189 570.279437025076 574.286416060777 50.578 0.75235 50.578 50.256 51.009 3.8147E-06 431 70 9 0 0 0 4.7131E-10 2 27920 130.56 124.39 1 1.0597 1.2655 0 769140000 360040000 409100000 12378 1485;1930 4703 4825 19316;19317 19316 GCTATLGNFAK 11 1 0 Unmodified _GCTATLGNFAK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.2794 2 570.279323 1138.54409 78396.4 0.39342 0.00022436 0.136 7.7557E-05 0.52942 0.00030192 570.279403877506 574.286400796829 49.311 0.702 49.311 48.977 49.679 0 397 58 10 0 0 0 4.4443E-08 1 27654 118.33 107.92 1 0.99393 1.1702 0 451430000 223210000 228220000 12379 1485;1930 4703 4825 19318 19318 GCTATLGNFAK 11 1 0 Unmodified _GCTATLGNFAK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.2868 2 570.279323 1138.54409 75776.99 0.49913 0.00028465 0.1516 8.6452E-05 0.65073 0.0003711 570.279471832458 574.286428159329 58.268 1.2515 58.268 57.909 59.161 0 499 96 9 0 0 0 0.00073603 2 29563 72.879 72.879 1 0.85588 0.73788 0 98933000 53689000 45244000 12380 1485;1930 4703 4825 19319;19320 19320 GCTATLGNFAK 11 1 0 Unmodified _GCTATLGNFAK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.2863 2 570.279323 1138.54409 75874.89 0.39699 0.00022639 0.016192 9.2341E-06 0.41318 0.00023563 570.27934159708 574.286310027018 58.664 1.2444 58.664 58.215 59.459 -3.8147E-06 559 99 9 0 0 0 0.00025087 3 29097 90.601 80.614 1 0.84333 0.7159 0 70410000 38956000 31454000 12381 1485;1930 4703 4825 19321;19322;19323 19322 GDAASSPAPAASVGSSQGGAR 21 0 1 Unmodified _GDAASSPAPAASVGSSQGGAR_ 0 0 0 E7EXA6;Q96S08;A0A0D9SF58;Q8WVB6;B4DEY3;F8WCC1 E7EXA6 E7EXA6 CHTF18;RUVBL Chromosome transmission fidelity protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 905.9316 2 900.927185 1799.83982 65945.76 0.6806 0.00061317 -0.13481 -0.00012145 0.54579 0.00049171 900.927362209903 905.931174574304 27.775 0.192 27.775 27.682 27.874 0 36 11 5 0 0 0 7.9772E-05 1 12957 54.598 54.598 1 1.1207 1.173 0 10830000 5612200 5217800 12382 524 4704 4826 19324 19324 GDAASSPAPAASVGSSQGGAR 21 0 1 Unmodified _GDAASSPAPAASVGSSQGGAR_ 0 0 0 E7EXA6;Q96S08;A0A0D9SF58;Q8WVB6;B4DEY3;F8WCC1 E7EXA6 E7EXA6 CHTF18;RUVBL Chromosome transmission fidelity protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.9318 2 900.927185 1799.83982 65209.35 0.40417 0.00036413 -0.15154 -0.00013653 0.25263 0.0002276 901.428329167452 905.931248783503 27.294 0.17363 27.294 27.186 27.359 0 32 9 5 0 0 0 4.4976E-08 1 12583 91.812 91.812 1 1.4941 1.5045 0 9344200 4130500 5213600 12383 524 4704 4826 19325 19325 GDADMYDLPK 10 1 0 Oxidation (M) _GDADM(ox)YDLPK_ GDADM(1)YDLPK GDADM(54.98)YDLPK 0 1 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.7539 2 570.747521 1139.48049 81735.22 0.72217 0.00041218 -0.41796 -0.00023855 0.30421 0.00017363 570.747084084821 574.754499460745 45.052 0.79412 45.052 44.665 45.459 0 265 72 5 0 0 0 0.0044771 3 24127 54.982 54.982 1 0.77804 0.8392 0 34321000 18866000 15455000 12384 1590 4705 4827 19326;19327;19328 19327 1371 GDADMYDLPK 10 1 0 Oxidation (M) _GDADM(ox)YDLPK_ GDADM(1)YDLPK GDADM(55.46)YDLPK 0 1 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.7476 2 570.747521 1139.48049 81396.42 0.86816 0.0004955 -0.77539 -0.00044255 0.092765 5.2945E-05 570.746957769336 574.754299482508 44.179 0.79436 44.179 43.883 44.677 0 286 70 6 0 0 0 0.0043062 2 24020 55.461 55.461 1 0.76892 0.85027 0 45083000 26184000 18899000 12385 1590 4705 4827 19329;19330 19330 1371 GDADQASNILASFGLSAR 18 0 1 Unmodified _GDADQASNILASFGLSAR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.9457 2 896.944847 1791.87514 64291.2 0.78359 0.00070283 -0.015829 -1.4198E-05 0.76776 0.00068864 896.944804326129 901.948853559521 121.16 0.62132 121.16 120.86 121.49 -7.6294E-06 259 40 9 0 0 0 2.2685E-92 2 78262 202.25 194.88 1 1.4242 1.5739 0 57105000 23521000 33584000 12386 542 4706 4828 19331;19332 19331 GDADQASNILASFGLSAR 18 0 1 Unmodified _GDADQASNILASFGLSAR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.9496 2 896.944847 1791.87514 64563.65 0.90809 0.00081451 0.10866 9.7462E-05 1.0168 0.00091197 896.945022920864 901.948997633258 120.7 0.6086 120.7 120.48 121.09 0 266 40 8 0 0 0 1.0475E-77 2 79845 195.87 195.87 1 1.3432 1.5542 0 68059000 26837000 41222000 12387 542 4706 4828 19333;19334 19334 GDADQASNILASFGLSAR 18 0 1 Unmodified _GDADQASNILASFGLSAR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.9452 2 896.944847 1791.87514 64061.82 0.58901 0.00052831 0.2526 0.00022656 0.84161 0.00075487 897.446497253328 901.948985481045 133.57 0.62997 133.57 133.34 133.97 1.5259E-05 156 25 9 0 0 0 2.547E-05 2 81354 69.258 69.258 1 1.0022 0.81876 0 14116000 6489500 7626300 12388 542 4706 4828 19335;19336 19336 GDADQASNILASFGLSAR 18 0 1 Unmodified _GDADQASNILASFGLSAR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 896.9453 2 896.944847 1791.87514 64156.28 0.71673 0.00064287 0.37357 0.00033507 1.0903 0.00097794 897.44670295461 901.949055275613 133.36 0.51773 133.36 133.13 133.65 1.5259E-05 131 19 10 0 0 0 4.0524E-08 2 80274 95.854 95.854 1 1.0381 0.86552 0 15902000 7873900 8027900 12389 542 4706 4828 19337;19338 19338 GDASLLQDGVLAEK 14 1 0 Unmodified _GDASLLQDGVLAEK_ 0 0 0 B4DFE2;A8K5V5;Q96QT6 B4DFE2 B4DFE2 PHF12 PHD finger protein 12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.3749 2 708.372463 1414.73037 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.041 1 87.041 86.541 87.541 0 0 0 0 0.0028148 1 52526 59.418 42.392 1 12390 752 4707 4829 19339 19339 GDCSAELGGDPSSNSEK 17 1 0 Unmodified _GDCSAELGGDPSSNSEK_ 0 0 0 Q13129;Q59GL0 Q13129 Q13129 RLF Zinc finger protein Rlf MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.3489 2 855.349587 1708.68462 65705.48 0.66753 0.00057097 -0.2117 -0.00018108 0.45583 0.0003899 855.349395743549 859.356458568032 24.208 0.22216 24.208 24.038 24.26 0 26 9 6 0 0 0 0.004658 2 9991 35.204 35.204 1 0.87094 0.87725 0 5362800 2347500 3015300 12391 1705 4708 4830 19340;19341 19341 GDCSAELGGDPSSNSEK 17 1 0 Unmodified _GDCSAELGGDPSSNSEK_ 0 0 0 Q13129;Q59GL0 Q13129 Q13129 RLF Zinc finger protein Rlf MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 859.3152 2 855.349587 1708.68462 67338.19 0.24023 0.00020548 -0.30223 -0.00025851 -0.062005 -5.3036E-05 855.348981034996 859.356437465647 23.898 0.2443 23.898 23.77 24.014 0 28 8 5 0 0 0 7.752E-05 3 9702 63.727 63.727 1 0.78165 0.79569 0 5179500 2245000 2934400 12392 1705 4708 4830 19342;19343;19344 19342 GDDEEWNEVLNK 12 1 0 Unmodified _GDDEEWNEVLNK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.321 2 724.320428 1446.6263 72232.43 0.73968 0.00053576 -0.36394 -0.00026361 0.37574 0.00027215 724.32028884985 728.327173275252 75.695 0.78663 75.695 75.293 76.08 0 390 66 8 0 0 0 8.1414E-23 2 44451 157.66 157.66 1 0.75686 0.84115 0 60135000 33301000 26834000 12393 2023 4709 4831 19345;19346 19346 GDDEEWNEVLNK 12 1 0 Unmodified _GDDEEWNEVLNK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.3212 2 724.320428 1446.6263 72494.89 0.5757 0.00041699 -0.14645 -0.00010608 0.42925 0.00031091 724.320258281864 728.327116346366 74.747 0.92357 74.747 74.28 75.203 0 441 80 8 0 0 0 4.1983E-18 2 44855 146.11 146.11 1 0.80738 0.91132 0 65332000 35585000 29747000 12394 2023 4709 4831 19347;19348 19348 GDDEEWNEVLNK 12 1 0 Unmodified _GDDEEWNEVLNK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.3282 2 724.320428 1446.6263 72052.55 0.63869 0.00046261 -0.069963 -5.0676E-05 0.56872 0.00041194 724.320515433166 728.327451267517 86.205 0.83401 86.205 85.889 86.723 0 397 56 9 0 0 0 1.3174E-22 2 47299 154.24 149.94 1 1.3857 1.0856 0 16624000 6596900 10028000 12395 2023 4709 4831 19349;19350 19350 GDDEEWNEVLNK 12 1 0 Unmodified _GDDEEWNEVLNK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.3281 2 724.320428 1446.6263 71874.77 0.64747 0.00046897 -0.11334 -8.2095E-05 0.53413 0.00038688 724.320303714965 728.327367369679 86.53 0.85472 86.53 86.127 86.982 0 329 52 8 0 0 0 1.8516E-22 2 46580 150.61 146.31 1 1.4465 1.1637 0 13840000 5737800 8101900 12396 2023 4709 4831 19351;19352 19351 GDDLQAIK 8 1 0 Unmodified _GDDLQAIK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;D3DPI2;G3V5V7;B4DQQ2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.2396 2 430.229625 858.444697 91432.52 -0.24313 -0.0001046 -0.68601 -0.00029514 -0.92914 -0.00039974 430.22909020512 434.236411116204 32.973 1.2058 32.973 32.544 33.75 0 458 106 6 0 0 0 0.011116 1 16470 70.67 39.38 1 0.83023 0.94467 0 146740000 74415000 72324000 12397 837;781 4710 4832 19353 19353 GDDLQAIKK 9 2 0 Unmodified _GDDLQAIKK_ 0 0 1 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.2769 2 494.277106 986.53966 84555.59 0.14912 7.3706E-05 -0.083302 -4.1175E-05 0.065817 3.2532E-05 494.276990840192 502.291163109892 22.576 0.60583 22.576 22.281 22.887 -1.9073E-06 186 37 9 0 0 0 4.1189E-05 2 8601 114.28 78.972 1 1.1314 1.3357 0 50831000 24075000 26755000 12398 837;781 4711 4833 19354;19355 19355 GDDLQAIKK 9 2 0 Unmodified _GDDLQAIKK_ 0 0 1 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.277 2 494.277106 986.53966 83918.21 0.22771 0.00011255 -0.11999 -5.9307E-05 0.10772 5.3244E-05 494.27694617449 502.291265409194 22.346 0.44735 22.346 22.14 22.588 0 81 19 8 0 0 0 1.3743E-07 2 8350 141.52 82.738 1 1.0673 1.2384 0 85922000 42501000 43420000 12399 837;781 4711 4833 19356;19357 19357 GDDLQAIKK 9 2 0 Unmodified _GDDLQAIKK_ 0 0 1 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.2915 2 494.277106 986.53966 85376.18 0.27482 0.00013584 -0.17248 -8.5255E-05 0.10233 5.0582E-05 494.276968020713 502.291182831576 24.599 0.43361 24.599 24.402 24.836 0 127 23 8 0 0 0 0.0010834 2 8679 96.331 52.523 1 0.60275 0.51573 0 10153000 5968200 4185200 12400 837;781 4711 4833 19358;19359 19359 GDDLQAIKK 9 2 0 Unmodified _GDDLQAIKK_ 0 0 1 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 502.2915 2 494.277106 986.53966 85305.2 0.15353 7.5889E-05 0.10249 5.0657E-05 0.25602 0.00012655 494.277100915431 502.291151920595 24.551 0.60651 24.551 24.344 24.95 0 121 28 8 0 0 0 0.002164 2 8151 87.308 56.234 1 0.58887 0.4974 0 10361000 6677700 3683500 12401 837;781 4711 4833 19360;19361 19361 GDEELDSLIK 10 1 0 Unmodified _GDEELDSLIK_ 0 0 0 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.7831 2 559.782418 1117.55028 80763.7 0.66048 0.00036973 -0.067805 -3.7956E-05 0.59268 0.00033177 559.782140359934 563.789701678807 63.689 0.76646 63.689 63.335 64.101 3.8147E-06 270 74 5 0 0 0 0.014443 1 36640 49.06 31.82 1 0.69234 0.68324 0 25080000 15500000 9579800 12402 1462 4712 4834 19362 19362 GDEELDSLIK 10 1 0 Unmodified _GDEELDSLIK_ 0 0 0 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.7896 2 559.782418 1117.55028 79965.97 0.38213 0.00021391 -0.11592 -6.4888E-05 0.26621 0.00014902 559.783134888655 563.789219835223 81.311 2.1236 81.311 80.746 82.87 0 1261 181 12 0 0 0 9.0893E-12 6 48237 139.78 85.559 1 0.67209 0.82137 0 3419600000 2001700000 1417900000 12403 1462 4712 4834 19363;19364;19365;19366;19367;19368 19364 GDEELDSLIK 10 1 0 Unmodified _GDEELDSLIK_ 0 0 0 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.7827 2 559.782418 1117.55028 80708.41 0.50893 0.00028489 0.32413 0.00018144 0.83306 0.00046633 559.781821083891 563.79004370935 62.528 1.6022 62.528 61.94 63.543 -3.8147E-06 329 142 4 0 0 0 0.0012794 1 36658 74.376 60.999 1 0.80928 0.82181 0 26326000 13050000 13276000 12404 1462 4712 4834 19369 19369 GDEELDSLIK 10 1 0 Unmodified _GDEELDSLIK_ 0 0 0 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.7827 2 559.782418 1117.55028 80082.94 0.61999 0.00034706 -0.35854 -0.0002007 0.26145 0.00014636 559.783087040057 563.789082925896 80.215 2.0476 80.215 79.719 81.766 0 1150 169 12 0 0 0 2.2478E-09 7 49222 128.38 103.49 1 0.67372 0.79905 0 4038500000 2315800000 1722700000 12405 1462 4712 4834 19370;19371;19372;19373;19374;19375;19376 19372 GDEELDSLIK 10 1 0 Unmodified _GDEELDSLIK_ 0 0 0 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.7899 2 559.782418 1117.55028 79698.72 0.58196 0.00032577 -0.22484 -0.00012586 0.35712 0.00019991 559.782798420175 563.78922937255 92.848 2.494 92.848 92.311 94.805 0 993 154 12 0 0 0 0.00015618 5 52057 95.502 71.347 1 0.87111 0.78057 0 531250000 285700000 245560000 12406 1462 4712 4834 19377;19378;19379;19380;19381 19379 GDEELDSLIK 10 1 0 Unmodified _GDEELDSLIK_ 0 0 0 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.7826 2 559.782418 1117.55028 79671.34 0.36339 0.00020342 -0.097799 -5.4746E-05 0.2656 0.00014868 559.782797603256 563.789346653827 92.817 2.5088 92.817 92.299 94.808 0 1002 157 12 0 0 0 0.00017611 5 50724 94.85 75.063 1 0.85545 0.7471 0 433150000 230330000 202810000 12407 1462 4712 4834 19382;19383;19384;19385;19386 19383 GDEVDGVDEVAK 12 1 0 Unmodified _GDEVDGVDEVAK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.786 2 616.785689 1231.55683 NaN NaN NaN -0.26427 -0.000163 NaN NaN NaN NaN 41.525 0.59365 41.525 41.378 41.971 0 0 0 0 7.2655E-29 1 21888 153.97 140.2 1 NaN NaN 0 21142000 21142000 0 12408 139 4713 4835 19387 19387 GDEVDGVDEVAK 12 1 0 Unmodified _GDEVDGVDEVAK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.7856 2 616.785689 1231.55683 NaN NaN NaN 0.14557 8.9786E-05 NaN NaN NaN NaN 40.707 0.6883 40.707 40.409 41.098 0 0 0 0 0.00049014 1 21637 88.392 72.059 1 NaN NaN 0 22355000 22355000 0 12409 139 4713 4835 19388 19388 GDEVDGVDEVAK 12 1 0 Unmodified _GDEVDGVDEVAK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.2875 2 616.785689 1231.55683 76977.13 0.21757 0.00013419 0.23537 0.00014517 0.45294 0.00027937 616.785863721967 620.792918064786 48.101 0.52059 48.101 47.837 48.357 0 123 35 5 0 0 0 0.022786 1 23461 37.717 37.717 1 1.2268 0.99713 0 2697900 1345600 1352300 12410 139 4713 4835 19389 19389 GDEVIFGEFSWPK 13 1 0 Unmodified _GDEVIFGEFSWPK_ 0 0 0 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 759.8734 2 755.864274 1509.714 72898.97 1.2053 0.00091106 0.84325 0.00063738 2.0486 0.0015484 755.864763614324 759.871911534948 132.6 0.42308 132.6 132.42 132.84 0 74 18 6 0 0 0 0.0018639 1 80658 56.094 52.67 1 1.8068 1.4146 0 3866200 1312600 2553600 12411 1851 4714 4836 19390 19390 GDFDENLNYPEQK 13 1 0 Unmodified _GDFDENLNYPEQK_ 0 0 0 Q5JPE4;F8VXU5;Q9UBQ0 Q5JPE4 Q5JPE4 DKFZp667O202;VPS29 Vacuolar protein sorting-associated protein 29 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.8556 2 784.84681 1567.67907 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.974 1 61.974 61.474 62.474 0 0 0 0 0.0016579 1 36332 70.942 63.296 1 12412 1261 4715 4837 19391 19391 GDFILVGDLMR 11 0 1 Unmodified _GDFILVGDLMR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.8285 2 618.326273 1234.63799 NaN NaN NaN -0.049125 -3.0375E-05 NaN NaN NaN NaN 119.39 0.42824 119.39 119.22 119.65 0 0 0 0 0.046979 1 76746 45.161 31.582 1 NaN NaN 0 1767400 1767400 0 12413 1770 4716 4838 19392 19392 GDFILVGDLMR 11 0 1 Unmodified _GDFILVGDLMR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3265 2 618.326273 1234.63799 81510.66 0.43904 0.00027147 0.49869 0.00030835 0.93773 0.00057982 618.326348821528 623.330683430387 118.87 0.44339 118.87 118.65 119.09 7.6294E-06 76 27 5 0 0 0 0.0075017 2 78248 52.49 37.821 1 0.66117 0.68313 0 4747600 2524900 2222700 12414 1770 4716 4838 19393;19394 19394 GDFLALDLGGTNFR 14 0 1 Unmodified _GDFLALDLGGTNFR_ 0 0 0 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9;A0A024R7R1;Q59H08;P52790 Q68E10 Q68E10 DKFZp686M1669;HK2;HK3 Hexokinase;Hexokinase-2;Hexokinase-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.3844 2 748.380623 1494.74669 71343.63 0.81683 0.0006113 -0.08756 -6.5528E-05 0.72927 0.00054577 748.381563233968 753.384299046923 118.16 0.41187 118.16 117.94 118.36 0 87 23 5 0 0 0 0.00010451 2 75752 84.479 76.255 1 1.8962 1.8875 0 8150400 3017600 5132700 12415 714 4717 4839 19395;19396 19396 GDFLALDLGGTNFR 14 0 1 Unmodified _GDFLALDLGGTNFR_ 0 0 0 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9;A0A024R7R1;Q59H08;P52790 Q68E10 Q68E10 DKFZp686M1669;HK2;HK3 Hexokinase;Hexokinase-2;Hexokinase-3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.8823 2 748.380623 1494.74669 NaN NaN NaN 0.80082 0.00059932 NaN NaN NaN NaN 117.71 0.34136 117.71 117.48 117.82 -7.6294E-06 0 0 0 0.0049073 1 77140 57.019 39.583 1 NaN NaN 0 4288900 4288900 0 12416 714 4717 4839 19397 19397 GDFLALDLGGTNFR 14 0 1 Unmodified _GDFLALDLGGTNFR_ 0 0 0 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9;A0A024R7R1;Q59H08;P52790 Q68E10 Q68E10 DKFZp686M1669;HK2;HK3 Hexokinase;Hexokinase-2;Hexokinase-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.3841 2 748.380623 1494.74669 NaN NaN NaN -0.60084 -0.00044966 NaN NaN NaN NaN 117.64 0.41202 117.64 117.42 117.83 -7.6294E-06 0 0 0 0.0029928 1 77195 63.727 38.51 1 NaN NaN 0 6565900 0 6565900 12417 714 4717 4839 19398 19398 GDFLASLENDIK 12 1 0 Unmodified _GDFLASLENDIK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3;Q96D47;D3DXJ4 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.3367 2 661.33535 1320.65615 76199.62 0.70592 0.00046685 0.1973 0.00013048 0.90322 0.00059733 661.335613177272 665.342634784932 114.65 0.43945 114.65 114.29 114.73 0 78 28 4 0 0 0 0.020076 1 74513 39.625 22.189 1 1.1493 1.2019 0 10294000 3054100 7239800 12418 1096 4718 4840 19399 19399 GDFSYIGNLMTK 12 1 0 Oxidation (M) _GDFSYIGNLM(ox)TK_ GDFSYIGNLM(1)TK GDFSYIGNLM(99.57)TK 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.3318 2 681.323928 1360.6333 73736.45 0.78012 0.00053152 -0.085786 -5.8448E-05 0.69434 0.00047307 681.324051320168 685.330822422072 82.625 0.71532 82.625 82.296 83.012 7.6294E-06 317 58 8 0 0 0 1.721E-05 2 49325 99.568 94.627 1 1.3366 1.5076 0 111910000 50112000 61795000 12419 1995 4719 4841 19400;19401 19400 1825 GDFSYIGNLMTK 12 1 0 Oxidation (M) _GDFSYIGNLM(ox)TK_ GDFSYIGNLM(1)TK GDFSYIGNLM(79.69)TK 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.3303 2 681.323928 1360.6333 73344.03 0.91837 0.0006257 -0.46366 -0.00031591 0.4547 0.0003098 681.323672367521 685.33063825029 81.633 0.5958 81.633 81.349 81.945 0 291 50 8 0 0 0 9.9136E-05 2 49739 79.693 73.658 1 1.2344 1.3844 0 113720000 54880000 58843000 12420 1995 4719 4841 19402;19403 19403 1825 GDFSYIGNLMTK 12 1 0 Oxidation (M) _GDFSYIGNLM(ox)TK_ GDFSYIGNLM(1)TK GDFSYIGNLM(87.79)TK 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.3245 2 681.323928 1360.6333 73701.46 0.69443 0.00047313 0.081237 5.5349E-05 0.77566 0.00052848 681.324050055206 685.331103238085 94.53 0.65053 94.53 94.214 94.864 0 242 41 8 0 0 0 0.00011462 1 52869 87.789 81.12 1 1.0454 0.81155 0 12747000 6887000 5860100 12421 1995 4719 4841 19404 19404 1825 GDFSYIGNLMTK 12 1 0 Oxidation (M) _GDFSYIGNLM(ox)TK_ GDFSYIGNLM(1)TK GDFSYIGNLM(64.1)TK 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.3311 2 681.323928 1360.6333 73844.04 0.7001 0.000477 -0.2165 -0.00014751 0.4836 0.00032949 681.323829829683 685.330956059545 94.501 0.67205 94.501 94.208 94.88 0 243 40 9 0 0 0 0.0004373 1 51993 64.103 60.964 1 1.0871 0.88843 0 12667000 5579500 7087600 12422 1995 4719 4841 19405 19405 1825 GDFSYIGNLMTK 12 1 0 Unmodified _GDFSYIGNLMTK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 677.3347 2 673.32647 1344.63839 74097.63 1.0582 0.00071253 -0.37842 -0.0002548 0.6798 0.00045773 673.326114384386 677.333493711923 115.53 0.52457 115.53 115.32 115.85 0 127 25 6 0 0 0 0.0016509 2 67682 60.598 58.073 1 1.7002 1.3464 0 10398000 3852100 6546000 12423 1995 4719 4842 19406;19407 19406 GDFSYIGNLMTK 12 1 0 Unmodified _GDFSYIGNLMTK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.3343 2 673.32647 1344.63839 74776.72 0.72319 0.00048694 -0.038956 -2.623E-05 0.68423 0.00046071 673.326280944374 677.33381737553 115.43 0.56668 115.43 115.18 115.74 7.6294E-06 123 26 6 0 0 0 0.022046 1 66633 38.238 33.939 1 1.7393 1.4288 0 9527700 3967800 5559900 12424 1995 4719 4842 19408 19408 GDFYTAHGEDALLAAR 16 0 1 Unmodified _GDFYTAHGEDALLAAR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;V9H0D5;V9H023;B4DN49;V9H0B2;Q0ZAJ2;V9H062;V9H015 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.2805 3 569.609276 1705.806 81424.94 0.67668 0.00038544 1.7816 0.0010148 2.4582 0.0014002 569.609616272639 573.282488152527 75.908 0.89992 75.908 75.378 76.278 0 149 75 5 0 0 0 0.00071287 1 44675 41.422 33.911 1 1.0897 1.1416 0 10917000 5828800 5088400 12425 1237 4720 4843 19409 19409 GDFYTAHGEDALLAAR 16 0 1 Unmodified _GDFYTAHGEDALLAAR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;V9H0D5;V9H023;B4DN49;V9H0B2;Q0ZAJ2;V9H062;V9H015 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.9454 3 569.609276 1705.806 79578.5 0.73855 0.00042068 1.2446 0.00070891 1.9831 0.0011296 569.943103373379 573.615367419515 74.584 0.56049 74.584 74.303 74.864 0 214 49 7 0 0 0 0.0046569 1 44856 31.115 25.686 1 1.0396 1.1338 0 29628000 14325000 15303000 12426 1237 4720 4843 19410 19410 GDGPICLVLAPTR 13 0 1 Unmodified _GDGPICLVLAPTR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRZ1;Q59F66;Q92841;B4DZQ7 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8742 2 684.868837 1367.72312 72690.09 0.61294 0.00041979 -0.16678 -0.00011422 0.44616 0.00030556 684.868784126809 689.872930045321 104.16 1.0122 104.16 103.83 104.84 0 403 84 9 0 0 0 0.00028723 4 64253 66.262 56.466 1 1.2955 1.4317 0 57128000 23900000 33227000 12427 1009;1801 4721 4844 19411;19412;19413;19414 19413 GDGPICLVLAPTR 13 0 1 Unmodified _GDGPICLVLAPTR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRZ1;Q59F66;Q92841;B4DZQ7 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.8693 2 684.868837 1367.72312 72394.88 0.31075 0.00021282 0.3149 0.00021566 0.62565 0.00042849 684.868942681273 689.873289743153 103.39 0.92552 103.39 103.14 104.06 -7.6294E-06 423 78 9 0 0 0 9.8064E-09 4 65297 115.29 96.614 1 1.3246 1.5165 0 85568000 35586000 49982000 12428 1009;1801 4721 4844 19415;19416;19417;19418 19418 GDGPICLVLAPTR 13 0 1 Unmodified _GDGPICLVLAPTR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRZ1;Q59F66;Q92841;B4DZQ7 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.8704 2 684.868837 1367.72312 72525.59 0.93837 0.00064266 0.036562 2.504E-05 0.97493 0.0006677 684.868761227602 689.873207921063 115.89 0.69152 115.89 115.64 116.33 0 111 29 6 0 0 0 6.3426E-05 2 67976 95.618 85.331 1 0.93614 0.78513 0 25681000 13007000 12675000 12429 1009;1801 4721 4844 19419;19420 19420 GDGPICLVLAPTR 13 0 1 Unmodified _GDGPICLVLAPTR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRZ1;Q59F66;Q92841;B4DZQ7 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.869 2 684.868837 1367.72312 71219.07 0.79557 0.00054486 -0.046595 -3.1912E-05 0.74897 0.00051295 684.868670615525 689.873188712433 115.74 0.76316 115.74 115.47 116.24 0 150 36 8 0 0 0 0.00030507 2 66871 65.395 61.378 1 0.84716 0.7147 0 17744000 10246000 7497400 12430 1009;1801 4721 4844 19421;19422 19422 GDGVTPPAGTAAPAPPPLSQDVPGR 25 0 1 Unmodified _GDGVTPPAGTAAPAPPPLSQDVPGR_ 0 0 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1163.5977 2 1163.09531 2324.17607 NaN NaN NaN -0.17834 -0.00020743 NaN NaN NaN NaN 91.279 0.26115 91.279 91.108 91.369 0 0 0 0 5.5919E-09 1 55181 62.055 49.89 1 NaN NaN 0 6459300 6459300 0 12431 364 4722 4845 19423 19423 GDGVTPPAGTAAPAPPPLSQDVPGR 25 0 1 Unmodified _GDGVTPPAGTAAPAPPPLSQDVPGR_ 0 0 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1168.0959 2 1163.09531 2324.17607 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.208 1 91.208 90.708 91.708 0 0 0 0 0.043491 1 55182 31.089 19.296 1 12432 364 4722 4845 19424 19424 GDGVTPPAGTAAPAPPPLSQDVPGR 25 0 1 Unmodified _GDGVTPPAGTAAPAPPPLSQDVPGR_ 0 0 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1163.5914 2 1163.09531 2324.17607 NaN NaN NaN -0.79924 -0.00092959 NaN NaN NaN NaN 90.598 0.23609 90.598 90.473 90.709 0 0 0 0 1.8426E-05 1 55962 46.926 34.048 1 NaN NaN 0 4879300 4879300 0 12433 364 4722 4845 19425 19425 GDHVIGIVTAK 11 1 0 Unmodified _GDHVIGIVTAK_ 0 0 0 Q9NQT5;Q9NYS3 Q9NQT5 Q9NQT5 EXOSC3;PNAS-3 Exosome complex component RRP40 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.3282 2 555.319306 1108.62406 83353.05 0.94889 0.00052694 0.39549 0.00021962 1.3444 0.00074656 555.319815788597 559.326101164368 43.307 0.67715 43.307 42.993 43.67 0 153 55 5 0 0 0 1.7293E-05 1 23419 105.98 86.198 1 0.95292 1.0459 0 41400000 23047000 18353000 12434 2061 4723 4846 19426 19426 GDHVIGIVTAK 11 1 0 Unmodified _GDHVIGIVTAK_ 0 0 0 Q9NQT5;Q9NYS3 Q9NQT5 Q9NQT5 EXOSC3;PNAS-3 Exosome complex component RRP40 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.2201 3 370.548629 1108.62406 99098.02 0.60935 0.0002258 -0.29257 -0.00010841 0.31678 0.00011738 370.548503353613 373.219861407006 43.282 0.4018 43.282 43.092 43.494 3.8147E-06 110 33 4 0 0 0 0.0016364 1 23492 44.847 36.715 1 0.89893 0.95426 0 23411000 11925000 11486000 12435 2061 4723 4846 19427 19427 GDIIGVQGNPGK 12 1 0 Unmodified _GDIIGVQGNPGK_ 0 0 0 Q15046;J3KRL2;H3BPV7;H3BVA8 Q15046 Q15046 KARS Lysine--tRNA ligase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.8185 2 577.811845 1153.60914 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.818 1 43.818 43.318 44.318 0 0 0 0 0.021103 1 23864 50.805 33.419 1 12436 1749 4724 4847 19428 19428 GDILVVATGQPEMVK 15 1 0 Oxidation (M) _GDILVVATGQPEM(ox)VK_ GDILVVATGQPEM(1)VK GDILVVATGQPEM(64.55)VK 0 1 0 A0A024R652;P11586;F5H2F4 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.9203 2 786.918723 1571.82289 69810.52 1.0065 0.00079205 1.0984 0.00086438 2.105 0.0016564 787.419920757026 790.925890181909 82.868 0.35133 82.868 82.728 83.079 7.6294E-06 55 28 5 0 0 0 0.00010684 1 49597 64.55 58.447 1 1.5422 1.5665 0 13671000 5703800 7967000 12437 196 4725 4848 19429 19429 158 GDILVVATGQPEMVK 15 1 0 Oxidation (M) _GDILVVATGQPEM(ox)VK_ GDILVVATGQPEM(1)VK GDILVVATGQPEM(57.02)VK 0 1 0 A0A024R652;P11586;F5H2F4 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.4281 2 786.918723 1571.82289 69805.09 0.78523 0.00061791 0.10638 8.3709E-05 0.89161 0.00070162 786.918587719607 790.925474604893 81.941 0.42314 81.941 81.766 82.189 0 90 36 4 0 0 0 0.00022283 1 50024 57.019 50.916 1 2.8422 2.845 0 15586000 5422200 10164000 12438 196 4725 4848 19430 19430 158 GDINILLIGDPSVAK 15 1 0 Unmodified _GDINILLIGDPSVAK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.9355 2 762.935231 1523.85591 71517.31 0.76246 0.00058171 0.072874 5.5598E-05 0.83533 0.0006373 762.935255046408 766.942233515302 116.86 0.76361 116.86 116.35 117.11 -7.6294E-06 235 52 8 0 0 0 4.6328E-10 2 74603 113.24 113.24 1 1.1 1.1076 0 27145000 11867000 15278000 12439 568 4726 4849 19431;19432 19431 GDINILLIGDPSVAK 15 1 0 Unmodified _GDINILLIGDPSVAK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.9358 2 762.935231 1523.85591 70940.55 0.75326 0.00057469 -0.014184 -1.0822E-05 0.73907 0.00056386 762.935066081617 766.942408540641 116.32 0.89319 116.32 115.75 116.64 -7.6294E-06 230 57 9 0 0 0 5.0188E-06 4 76024 96.745 96.745 1 1.1233 1.2094 0 37801000 17012000 20789000 12440 568 4726 4849 19433;19434;19435;19436 19433 GDINILLIGDPSVAK 15 1 0 Unmodified _GDINILLIGDPSVAK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 766.9434 2 762.935231 1523.85591 70734.81 1.0297 0.00078559 0.34348 0.00026205 1.3732 0.0010476 762.935045031697 766.942625494212 128.68 0.48651 128.68 128.44 128.93 0 106 21 7 0 0 0 0.0020323 2 77669 46.069 46.069 1 0.62155 0.49755 0 8633600 4801300 3832300 12441 568 4726 4849 19437;19438 19437 GDINILLIGDPSVAK 15 1 0 Unmodified _GDINILLIGDPSVAK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.9358 2 762.935231 1523.85591 71396.06 0.96668 0.00073752 0.34106 0.00026021 1.3077 0.00099773 762.93503850722 766.942858458096 128.45 0.49608 128.45 128.25 128.75 0 106 20 7 0 0 0 0.00026866 2 76720 61.11 57.465 1 0.70183 0.56961 0 4418800 2571600 1847100 12442 568 4726 4849 19439;19440 19440 GDIWWNPEQLK 11 1 0 Unmodified _GDIWWNPEQLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.3528 2 693.346052 1384.67755 74443.68 0.74855 0.00051901 0.51015 0.00035371 1.2587 0.00087272 693.346029918419 697.354139214318 104.77 1.076 104.77 104.04 105.12 0 274 88 6 0 0 0 0.023239 1 64764 42.348 42.348 1 0.73555 0.73617 0 18773000 10716000 8057200 12443 897 4727 4850 19441 19441 GDIWWNPEQLK 11 1 0 Unmodified _GDIWWNPEQLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.3539 2 693.346052 1384.67755 74450.84 0.62348 0.00043229 0.027674 1.9188E-05 0.65115 0.00045147 693.346090627571 697.353139208721 103.95 0.77327 103.95 103.61 104.38 7.6294E-06 243 66 5 0 0 0 0.015285 1 65924 46.406 46.406 1 0.73687 0.79252 0 21558000 12611000 8946300 12444 897 4727 4850 19442 19442 GDIWWNPEQLK 11 1 0 Unmodified _GDIWWNPEQLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 697.3538 2 693.346052 1384.67755 74324.77 0.83441 0.00057853 -0.41498 -0.00028772 0.41943 0.00029081 693.345697279842 697.352841038092 116.05 0.57974 116.05 115.77 116.34 0 107 28 5 0 0 0 0.0063655 1 67197 54.539 49.337 1 1.3406 1.0987 0 8725800 4336400 4389400 12445 897 4727 4850 19443 19443 GDKVDILYNNIK 12 2 0 Unmodified _GDKVDILYNNIK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.3959 2 696.380091 1390.74563 72672.47 0.60484 0.0004212 -0.27035 -0.00018826 0.33449 0.00023293 696.380085897 704.394998876392 75.025 0.7179 75.025 74.654 75.372 7.6294E-06 268 53 7 0 0 0 0.044329 1 39774 47.971 44.208 1 0.81524 0.69763 0 9934900 5438400 4496500 12446 2148 4728 4851 19444 19444 GDKVDILYNNIK 12 2 0 Unmodified _GDKVDILYNNIK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.3945 2 696.380091 1390.74563 72818.71 0.42097 0.00029316 0.10026 6.9816E-05 0.52123 0.00036297 696.380027062496 704.395297876123 75.222 0.68783 75.222 74.871 75.559 0 249 49 7 0 0 0 0.053328 1 39065 46.796 46.796 1 0.87747 0.74018 0 8231200 4379900 3851300 12447 2148 4728 4851 19445 19445 GDLDLELVLLCK 12 1 0 Unmodified _GDLDLELVLLCK_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7;K7EKJ9;K7EKY0;K7ER69;K7EJ09 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.3852 2 694.378703 1386.74285 NaN NaN NaN -0.35793 -0.00024854 NaN NaN NaN NaN 123.43 0.17269 123.43 123.31 123.48 7.6294E-06 0 0 0 0.018103 1 81998 51.927 38.745 1 NaN NaN 0 1218300 0 1218300 12448 220 4729 4852 19446 19446 GDLETLQPGDDVEFTIK 17 1 0 Unmodified _GDLETLQPGDDVEFTIK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;E9PNG3 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.9724 2 938.962371 1875.91019 63473.78 0.63239 0.00059379 -0.10893 -0.00010228 0.52346 0.00049151 938.96222797303 942.969264759046 106.94 0.52697 106.94 106.74 107.27 0 225 39 7 0 0 0 6.8726E-09 2 66423 100.55 100.55 1 2.5809 2.7908 0 36363000 10473000 25890000 12449 42 4730 4853 19447;19448 19447 GDLETLQPGDDVEFTIK 17 1 0 Unmodified _GDLETLQPGDDVEFTIK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;E9PNG3 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 938.9611 2 938.962371 1875.91019 64013.75 0.9086 0.00085314 -0.45484 -0.00042708 0.45376 0.00042607 938.961885533627 942.968976304091 106.45 0.54386 106.45 106.19 106.74 0 239 41 7 0 0 0 7.3601E-05 3 67671 67.08 67.08 1 2.5533 2.826 0 45559000 14175000 31383000 12450 42 4730 4853 19449;19450;19451 19450 GDLETLQPGDDVEFTIK 17 1 0 Unmodified _GDLETLQPGDDVEFTIK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;E9PNG3 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 943.4323 2 938.962371 1875.91019 63632.88 0.81668 0.00076683 -0.76522 -0.00071851 0.051459 4.8318E-05 939.463204579874 943.470339694191 118.26 0.53841 118.26 118.02 118.56 0 90 21 7 0 0 0 0.00010821 2 69722 59.185 59.185 1 1.9835 1.59 0 8331300 3090000 5241300 12451 42 4730 4853 19452;19453 19452 GDLGIEIPAEK 11 1 0 Unmodified _GDLGIEIPAEK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;Q8WUW7;Q504U3;H3BR70;B4DPM0;Q16716;Q16715;P30613 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2;PKLR Pyruvate kinase;Pyruvate kinase PKM;Pyruvate kinase PKLR MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.3088 2 571.308603 1140.60265 81072.96 0.87079 0.00049749 -0.15961 -9.1184E-05 0.71119 0.00040631 571.308700808964 575.315710913599 82.846 0.99622 82.846 82.481 83.477 0 316 83 8 0 0 0 1.7333E-06 2 49450 112.04 73.031 1 3.3343 3.8071 0 179410000 44284000 135120000 12452 1481 4731 4854 19454;19455 19455 GDLGIEIPAEK 11 1 0 Unmodified _GDLGIEIPAEK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;Q8WUW7;Q504U3;H3BR70;B4DPM0;Q16716;Q16715;P30613 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2;PKLR Pyruvate kinase;Pyruvate kinase PKM;Pyruvate kinase PKLR MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.3159 2 571.308603 1140.60265 80340.66 0.83098 0.00047475 -0.41148 -0.00023508 0.4195 0.00023966 571.308430458373 575.315535337346 81.846 0.68308 81.846 81.531 82.214 0 315 58 8 0 0 0 0.00011828 2 50046 96.342 59.151 1 3.2385 3.759 0 223760000 51917000 171840000 12453 1481 4731 4854 19456;19457 19457 GDLGIEIPAEK 11 1 0 Unmodified _GDLGIEIPAEK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;Q8WUW7;Q504U3;H3BR70;B4DPM0;Q16716;Q16715;P30613 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2;PKLR Pyruvate kinase;Pyruvate kinase PKM;Pyruvate kinase PKLR MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.3159 2 571.308603 1140.60265 81016.22 0.57886 0.00033071 -0.12632 -7.2168E-05 0.45254 0.00025854 571.308504504256 575.315563738218 94.527 0.561 94.527 94.244 94.805 0 157 34 7 0 0 0 0.0057507 1 52832 55.649 27.636 1 1.8549 1.4837 0 8803400 3128000 5675400 12454 1481 4731 4854 19458 19458 GDLGIEIPAEK 11 1 0 Unmodified _GDLGIEIPAEK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;Q8WUW7;Q504U3;H3BR70;B4DPM0;Q16716;Q16715;P30613 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2;PKLR Pyruvate kinase;Pyruvate kinase PKM;Pyruvate kinase PKLR MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.3157 2 571.308603 1140.60265 81041.4 0.57569 0.0003289 -0.06282 -3.589E-05 0.51287 0.00029301 571.308471341339 575.315582092183 94.473 0.6333 94.473 94.175 94.808 0 194 38 8 0 0 0 0.043879 1 51895 35.541 18.311 1 1.9128 1.5664 0 8571800 2524500 6047300 12455 1481 4731 4854 19459 19459 GDLIGVVEALTR 12 0 1 Unmodified _GDLIGVVEALTR_ 0 0 0 Q8IY17 Q8IY17 Q8IY17 PNPLA6 Neuropathy target esterase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8601 2 621.856252 1241.69795 81003.26 0.92824 0.00057723 -0.5874 -0.00036528 0.34084 0.00021195 621.856019773238 626.859840787958 125.67 0.42576 125.67 125.51 125.93 0 83 28 5 0 0 0 0.018707 1 81808 40.589 40.589 1 0.74278 0.80018 0 3039400 1841300 1198000 12456 1895 4732 4855 19460 19460 GDLIGVVEALTR 12 0 1 Unmodified _GDLIGVVEALTR_ 0 0 0 Q8IY17 Q8IY17 Q8IY17 PNPLA6 Neuropathy target esterase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8609 2 621.856252 1241.69795 79335.39 0.72541 0.0004511 -0.51252 -0.00031871 0.21289 0.00013239 621.856196274052 626.859709315218 125.25 0.49567 125.25 124.93 125.43 0 86 35 4 0 0 0 0.0050534 2 83445 51.927 48.004 1 0.62307 0.6543 0 4134800 2758200 1376600 12457 1895 4732 4855 19461;19462 19462 GDLLQVVQEAFEK 13 1 0 Unmodified _GDLLQVVQEAFEK_ 0 0 0 O95613 O95613 O95613 PCNT Pericentrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3912 2 738.390656 1474.76676 73840.63 0.84613 0.00062477 -0.63503 -0.0004689 0.21109 0.00015587 738.390626027022 742.397885553126 130.58 0.24106 130.58 130.45 130.69 0 46 14 5 0 0 0 0.00013556 2 85121 73.632 48.778 1 0.52663 0.58716 0 2489200 1632200 856950 12458 1429 4733 4856 19463;19464 19463 GDLLQVVQEAFEK 13 1 0 Unmodified _GDLLQVVQEAFEK_ 0 0 0 O95613 O95613 O95613 PCNT Pericentrin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3915 2 738.390656 1474.76676 NaN NaN NaN -1.3557 -0.0010011 NaN NaN NaN NaN 130.08 0.30029 130.08 129.97 130.27 0 0 0 0 0.021227 1 86915 47.302 28.99 1 NaN NaN 0 2202200 2202200 0 12459 1429 4733 4856 19465 19465 GDLNDCFIPCTPK 13 1 0 Unmodified _GDLNDCFIPCTPK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.3514 2 768.844701 1535.67485 NaN NaN NaN 0.67451 0.00051859 NaN NaN NaN NaN 83.799 0.48037 83.799 83.516 83.996 0 0 0 0 0.046081 1 50096 40.589 33.564 1 NaN NaN 0 4537900 0 4537900 12460 196 4734 4857 19466 19466 GDLNDCFIPCTPK 13 1 0 Unmodified _GDLNDCFIPCTPK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.8435 2 768.844701 1535.67485 NaN NaN NaN 0.33149 0.00025486 NaN NaN NaN NaN 83.765 0.22128 83.765 83.638 83.859 7.6294E-06 0 0 0 0.051491 1 50176 39.917 29.159 1 NaN NaN 0 3028700 3028700 0 12461 196 4734 4857 19467 19467 GDLNDCFIPCTPK 13 1 0 Unmodified _GDLNDCFIPCTPK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.8447 2 768.844701 1535.67485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.797 1 82.797 82.297 83.297 0 0 0 0 0.0055975 1 50689 57.175 45.116 1 12462 196 4734 4857 19468 19468 GDLNDCFIPCTPK 13 1 0 Unmodified _GDLNDCFIPCTPK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.8448 2 768.844701 1535.67485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.859 1 82.859 82.359 83.359 0 0 0 0 0.013359 1 50732 51.998 45.339 1 12463 196 4734 4857 19469 19469 GDLSTALEVAIDCYEK 16 1 0 Unmodified _GDLSTALEVAIDCYEK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.4321 2 892.424567 1782.83458 65381.71 0.74322 0.00066327 0.25905 0.00023118 1.0023 0.00089445 892.424824565052 896.9331606791 120.21 0.45415 120.21 119.94 120.4 0 97 32 5 0 0 0 0.00016225 1 77387 61.641 55.918 1 2.1027 2.0867 0 8163900 2939200 5224700 12464 1207 4735 4858 19470 19470 GDLSTALEVAIDCYEK 16 1 0 Unmodified _GDLSTALEVAIDCYEK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.4326 2 892.424567 1782.83458 64752.18 0.84746 0.00075629 0.064813 5.7841E-05 0.91227 0.00081413 892.424631849619 896.431426731406 119.73 0.36629 119.73 119.55 119.92 0 100 26 6 0 0 0 5.5001E-05 1 78964 83.204 83.204 1 1.9481 1.9706 0 8954400 3467300 5487100 12465 1207 4735 4858 19471 19471 GDLSTALEVAIDCYEK 16 1 0 Unmodified _GDLSTALEVAIDCYEK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.4321 2 892.424567 1782.83458 65442.51 1.0427 0.0009305 0.15845 0.00014141 1.2011 0.0010719 892.424801054831 896.431081810231 132.85 0.38382 132.85 132.61 133 0 45 16 5 0 0 0 0.0024789 1 80839 40.725 38.585 1 0.82686 0.64808 0 3189800 1739700 1450200 12466 1207 4735 4858 19472 19472 GDNSSVSSLCISPDGK 16 1 0 Unmodified _GDNSSVSSLCISPDGK_ 0 0 0 Q15061;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.8701 2 811.869959 1621.72536 67535.33 0.60137 0.00048824 0.054941 4.4605E-05 0.65631 0.00053284 811.869618990585 815.877323616352 63.178 0.71559 63.178 62.763 63.479 0 383 69 8 0 0 0 0.00011687 3 36165 98.942 98.942 1 0.859 0.95723 0 61602000 33003000 28598000 12467 1752 4736 4859 19473;19474;19475 19475 GDNSSVSSLCISPDGK 16 1 0 Unmodified _GDNSSVSSLCISPDGK_ 0 0 0 Q15061;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.8776 2 811.869959 1621.72536 67047.06 0.54256 0.00044049 -0.0079512 -6.4553E-06 0.53461 0.00043403 811.869849814307 815.877122889329 62.104 0.89687 62.104 61.703 62.599 -3.8147E-06 447 82 8 0 0 0 0.00012424 2 36292 95.631 95.631 1 0.85377 0.94805 0 49416000 26130000 23286000 12468 1752 4736 4859 19476;19477 19476 GDNSSVSSLCISPDGK 16 1 0 Unmodified _GDNSSVSSLCISPDGK_ 0 0 0 Q15061;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.8699 2 811.869959 1621.72536 66527.63 0.57457 0.00046647 0.018518 1.5034E-05 0.59309 0.00048151 811.870114563126 815.877301831688 72.782 0.85425 72.782 72.296 73.15 0 386 61 8 0 0 0 0.015138 1 38492 42.317 42.317 1 1.1639 0.90895 0 11976000 5358400 6617300 12469 1752 4736 4859 19478 19478 GDNSSVSSLCISPDGK 16 1 0 Unmodified _GDNSSVSSLCISPDGK_ 0 0 0 Q15061;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.8703 2 811.869959 1621.72536 67046.75 0.5808 0.00047153 -0.22594 -0.00018343 0.35486 0.0002881 811.869968927704 815.877043520369 73.368 0.90749 73.368 72.818 73.725 0 406 64 9 0 0 0 0.0002633 1 38069 66.246 66.246 1 1.1577 0.94895 0 12462000 5742200 6719700 12470 1752 4736 4859 19479 19479 GDPEAALIQYLTNEEAR 17 0 1 Unmodified _GDPEAALIQYLTNEEAR_ 0 0 0 D3DQF6;B3KY61;U3KPZ7;Q9P2N5 D3DQF6 D3DQF6 POU4F3;RBM27 RNA-binding protein 27 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.5289 2 945.465612 1888.91667 75396.15 0.7595 0.00071808 -1.0896 -0.0010302 -0.3301 -0.00031209 945.967272837454 950.971448889948 123.78 0.16484 123.78 123.7 123.87 -7.6294E-06 28 11 5 0 0 0 0.020738 1 80285 41.401 36.322 1 0.93954 1.0208 0 1676500 806830 869660 12471 958 4737 4860 19480 19480 GDPLGGVISNYLLEK 15 1 0 Unmodified _GDPLGGVISNYLLEK_ 0 0 0 E9PDF6;B0I1S9;O43795;E7EQD9;Q05CR5;Q14777 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.9253 2 787.924863 1573.83517 68851.29 0.85209 0.00067139 -0.2348 -0.000185 0.61729 0.00048638 787.925544034002 791.931514760288 120.53 0.56442 120.53 120.25 120.82 -7.6294E-06 193 39 8 0 0 0 5.936E-07 3 77728 100.55 100.55 1 1.8697 1.9019 0 13961000 4265200 9695300 12472 805 4738 4861 19481;19482;19483 19482 GDPLGGVISNYLLEK 15 1 0 Unmodified _GDPLGGVISNYLLEK_ 0 0 0 E9PDF6;B0I1S9;O43795;E7EQD9;Q05CR5;Q14777 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.9248 2 787.924863 1573.83517 67965.21 1.1244 0.00088591 0.099142 7.8116E-05 1.2235 0.00096403 787.925436130413 791.931853083684 120.08 0.51007 120.08 119.83 120.34 -7.6294E-06 158 36 6 0 0 0 2.0046E-07 2 79252 108.59 108.59 1 1.9302 2.0025 0 18812000 6485400 12326000 12473 805 4738 4861 19484;19485 19484 GDPLLDQR 8 0 1 Unmodified _GDPLLDQR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.2403 2 457.240524 912.466495 87997.25 0.26176 0.00011969 0.38224 0.00017477 0.64399 0.00029446 457.239935800955 462.244341287541 40.71 0.69239 40.71 40.37 41.062 0 227 61 6 0 0 0 0.027474 1 21311 53.878 43.41 1 1.241 1.3129 0 40988000 20806000 20182000 12474 1411 4739 4862 19486 19486 GDQPAASGDSDDDEPPPLPR 20 0 1 Unmodified _GDQPAASGDSDDDEPPPLPR_ 0 0 0 Q6IB11;O00264 Q6IB11 Q6IB11 PGRMC1 Membrane-associated progesterone receptor component 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1018.95 2 1018.4456 2034.87666 61498.72 0.23005 0.0002343 0.19962 0.0002033 0.42967 0.0004376 1018.94681344938 1023.45060158472 59.019 0.39127 59.019 58.804 59.195 0 106 30 6 0 0 0 0.0018326 2 33449 34.179 34.179 1 0.92529 0.95045 0 6439200 2959000 3480200 12475 1361 4740 4863 19487;19488 19488 GDQPAASGDSDDDEPPPLPR 20 0 1 Unmodified _GDQPAASGDSDDDEPPPLPR_ 0 0 0 Q6IB11;O00264 Q6IB11 Q6IB11 PGRMC1 Membrane-associated progesterone receptor component 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1023.9498 2 1018.4456 2034.87666 NaN NaN NaN -0.029387 -2.9929E-05 NaN NaN NaN NaN 58.204 0.1638 58.204 58.093 58.257 3.8147E-06 0 0 0 0.00094899 1 33743 47.774 42.596 1 NaN NaN 0 2838900 0 2838900 12476 1361 4740 4863 19489 19489 GDSESEEDEDLEVPVPSR 18 0 1 Unmodified _GDSESEEDEDLEVPVPSR_ 0 0 0 A0A0S2Z472;A8KAH7;A0A024R2W3;P13861 A0A0S2Z472 A0A0S2Z472 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 999.9362 2 994.931996 1987.84944 NaN NaN NaN 0.056535 5.6249E-05 NaN NaN NaN NaN 78.237 0.257 78.237 78.121 78.378 0 0 0 0 0.00033533 1 46289 62.042 56.318 1 NaN NaN 0 5434500 0 5434500 12477 124 4741 4864 19490 19490 GDSESEEDEDLEVPVPSR 18 0 1 Unmodified _GDSESEEDEDLEVPVPSR_ 0 0 0 A0A0S2Z472;A8KAH7;A0A024R2W3;P13861 A0A0S2Z472 A0A0S2Z472 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 999.9357 2 994.931996 1987.84944 NaN NaN NaN 0.085017 8.4586E-05 NaN NaN NaN NaN 77.427 0.29795 77.427 77.295 77.593 0 0 0 0 0.041062 1 46787 31.526 31.526 1 NaN NaN 0 5558800 0 5558800 12478 124 4741 4864 19491 19491 GDSPLHSIR 9 0 1 Unmodified _GDSPLHSIR_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;H7C5K0 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.2598 2 491.259248 980.503943 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.779 1 26.779 26.279 27.279 -1.9073E-06 0 0 0 0.0089737 1 12122 64.654 46.805 1 12479 512 4742 4865 19492 19492 GDSVIVVLR 9 0 1 Unmodified _GDSVIVVLR_ 0 0 0 P62316;K7EJB5 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.2898 2 479.290017 956.565481 NaN NaN NaN -0.30095 -0.00014424 NaN NaN NaN NaN 80.92 0.79691 80.92 80.642 81.439 0 0 0 0 0.0013201 1 48155 86.794 63.865 1 NaN NaN 0 16897000 16897000 0 12480 1645 4743 4866 19493 19493 GDSVIVVLR 9 0 1 Unmodified _GDSVIVVLR_ 0 0 0 P62316;K7EJB5 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2899 2 479.290017 956.565481 88572.3 0.36453 0.00017472 -0.5211 -0.00024976 -0.15657 -7.5041E-05 479.289816259857 484.293732480679 79.75 0.72189 79.75 79.452 80.174 0 195 55 5 0 0 0 0.0028606 2 48449 73.26 58.484 1 0.97053 1.0629 0 32146000 16346000 15800000 12481 1645 4743 4866 19494;19495 19495 GDSVIVVLR 9 0 1 Unmodified _GDSVIVVLR_ 0 0 0 P62316;K7EJB5 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 479.2897 2 479.290017 956.565481 89016.65 0.18823 9.0215E-05 -0.31678 -0.00015183 -0.12855 -6.1613E-05 479.289805678017 484.293936042884 91.879 0.94086 91.879 91.607 92.548 0 162 50 5 0 0 0 0.031367 1 50260 45.489 35.502 1 0.56758 0.48434 0 2907100 1743300 1163800 12482 1645 4743 4866 19496 19496 GDTHEASACLGFQEEDPPGEK 21 1 0 Unmodified _GDTHEASACLGFQEEDPPGEK_ 0 0 0 Q7Z5J4;A8MXE8 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 761.3299 3 758.658695 2272.95425 70058.01 0.45514 0.00034529 0.018821 1.4279E-05 0.47396 0.00035957 758.65881779649 761.330178655737 64.223 0.49048 64.223 64.003 64.494 0 123 38 5 0 0 0 0.00012755 1 33051 25.496 25.496 1 2.628 2.2081 0 2159100 620530 1538500 12483 1879 4744 4867 19497 19497 GDTHEASACLGFQEEDPPGEK 21 1 0 Unmodified _GDTHEASACLGFQEEDPPGEK_ 0 0 0 Q7Z5J4;A8MXE8 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.6644 3 758.658695 2272.95425 71139.86 0.41009 0.00031112 0.22301 0.00016919 0.6331 0.00048031 758.99296337026 761.330156012335 64.92 0.49094 64.92 64.653 65.144 7.6294E-06 129 40 6 0 0 0 0.0012541 1 32758 17.146 17.146 1 2.0915 1.6295 0 2125500 874120 1251300 12484 1879 4744 4867 19498 19498 GDTPGHATPGHGGATSSAR 19 0 1 Unmodified _GDTPGHATPGHGGATSSAR_ 0 0 0 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.6034 3 578.603184 1732.78772 80058.59 -0.00062717 -3.6288E-07 1.1927 0.00069011 1.1921 0.00068975 578.603885924833 581.940080836425 14.538 0.24361 14.538 14.435 14.679 0 27 9 6 0 0 0 0.0035957 1 2421 24.3 20.128 1 1.235 1.2929 0 4245200 1883300 2361900 12485 1408 4745 4868 19499 19499 GDVAEGDLIEHFSQFGTVEK 20 1 0 Unmodified _GDVAEGDLIEHFSQFGTVEK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1093.5276 2 1089.52112 2177.02768 58561.91 0.31169 0.0003396 0.6541 0.00071265 0.96579 0.0010523 1090.02294730478 1093.52899302561 107.14 0.61794 107.14 106.81 107.43 0 230 47 7 0 0 0 7.4458E-06 1 66548 51.03 45.751 1 1.2229 1.1987 0 22475000 9741400 12733000 12486 1706 4746 4869 19500 19500 GDVAEGDLIEHFSQFGTVEK 20 1 0 Unmodified _GDVAEGDLIEHFSQFGTVEK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.0176 3 726.683169 2177.02768 71079.17 0.83174 0.00060441 0.12425 9.0291E-05 0.95599 0.0006947 727.017488012487 729.688915345434 107.12 1.1055 107.12 106.78 107.89 7.6294E-06 527 82 12 0 0 0 7.8222E-07 2 66585 56.081 52.477 1 1.2006 1.3598 0 90207000 39213000 50994000 12487 1706 4746 4869 19501;19502 19501 GDVAEGDLIEHFSQFGTVEK 20 1 0 Unmodified _GDVAEGDLIEHFSQFGTVEK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.018 3 726.683169 2177.02768 70981.37 0.90425 0.0006571 0.16812 0.00012217 1.0724 0.00077927 727.017520306694 729.688857135059 106.45 0.84637 106.45 106.04 106.89 0 512 64 12 0 0 0 1.5829E-09 2 67655 85.231 81.482 1 1.1197 1.2663 0 132350000 59013000 73337000 12488 1706 4746 4869 19503;19504 19503 GDVAEGDLIEHFSQFGTVEK 20 1 0 Unmodified _GDVAEGDLIEHFSQFGTVEK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1090.022 2 1089.52112 2177.02768 57737.5 0.43966 0.00047902 0.47121 0.00051339 0.91087 0.00099241 1090.022556814 1094.03048101934 106.41 0.51675 106.41 106.19 106.71 0 235 39 8 0 0 0 0.0053108 1 67663 28.297 25.663 1 1.2382 1.2685 0 25556000 11573000 13983000 12489 1706 4746 4869 19505 19505 GDVAEGDLIEHFSQFGTVEK 20 1 0 Unmodified _GDVAEGDLIEHFSQFGTVEK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.0187 3 726.683169 2177.02768 69729.6 0.98908 0.00071875 0.11786 8.5648E-05 1.1069 0.0008044 727.017290972353 729.354378888688 117.97 0.65794 117.97 117.6 118.26 0 239 27 14 0 0 0 2.9805E-09 2 69535 74.698 70.895 1 0.84132 0.67947 0 22770000 13142000 9628200 12490 1706 4746 4869 19506;19507 19506 GDVAEGDLIEHFSQFGTVEK 20 1 0 Unmodified _GDVAEGDLIEHFSQFGTVEK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.3557 3 726.683169 2177.02768 70932.48 0.5646 0.00041029 0.42991 0.00031241 0.99451 0.0007227 727.017640605313 729.689094617228 117.77 0.575 117.77 117.49 118.07 0 147 27 7 0 0 0 2.9502E-07 2 68480 64.522 59.52 1 0.95357 0.76582 0 17611000 9322700 8288500 12491 1706 4746 4869 19508;19509 19508 GDVEEDETIPDSEQDIRPR 19 0 2 Unmodified _GDVEEDETIPDSEQDIRPR_ 0 0 1 A0A024RAM0;Q92973 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.0117 3 734.004859 2198.99275 70471.64 0.59126 0.00043399 0.36153 0.00026537 0.9528 0.00069936 734.005029848163 740.677000506881 59.038 0.62534 59.038 58.735 59.36 3.8147E-06 257 50 8 0 0 0 6.1008E-06 2 33425 53.278 53.278 1 2.5035 2.713 0 25089000 6761900 18327000 12492 309 4747 4870 19510;19511 19511 GDVENIEVVQK 11 1 0 Unmodified _GDVENIEVVQK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.3298 2 615.322242 1228.62993 78349.77 0.34394 0.00021163 0.27578 0.00016969 0.61972 0.00038133 615.322454033343 619.329391731494 58.716 0.51588 58.716 58.465 58.981 -3.8147E-06 141 38 5 0 0 0 0.0083399 1 29893 50.978 37.6 1 1.5987 1.3098 0 2536700 984450 1552300 12493 1207 4748 4871 19512 19512 GDVENIEVVQK 11 1 0 Unmodified _GDVENIEVVQK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 619.3295 2 615.322242 1228.62993 78383.59 0.38879 0.00023923 0.33371 0.00020534 0.7225 0.00044457 615.322490637977 619.329542066732 59.266 0.67714 59.266 58.882 59.559 -3.8147E-06 164 54 5 0 0 0 1.0988E-05 1 29583 108.43 88.656 1 1.3721 1.1121 0 2718500 986840 1731600 12494 1207 4748 4871 19513 19513 GDVGSADIQDLEK 13 1 0 Unmodified _GDVGSADIQDLEK_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.8258 2 673.825346 1345.63614 76816.34 0.44694 0.00030116 0.37816 0.00025482 0.8251 0.00055598 673.825934798682 677.832672324056 62.598 0.55617 62.598 62.279 62.835 0 203 52 6 0 0 0 0.00034597 2 36018 63.408 63.408 1 1.3251 1.3035 0 19921000 8295900 11625000 12495 1794 4749 4872 19514;19515 19515 GDVGSADIQDLEK 13 1 0 Unmodified _GDVGSADIQDLEK_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8328 2 673.825346 1345.63614 74954.84 0.63716 0.00042933 0.82435 0.00055547 1.4615 0.0009848 673.825814120428 677.833034675472 61.423 0.66935 61.423 61.161 61.83 -3.8147E-06 207 62 5 0 0 0 0.00055246 1 36043 61.435 54.776 1 1.3634 1.4095 0 18506000 8704600 9801400 12496 1794 4749 4872 19516 19516 GDVTITNDGATILK 14 1 0 Unmodified _GDVTITNDGATILK_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.3876 2 709.380288 1416.74602 NaN NaN NaN -0.68182 -0.00048367 NaN NaN NaN NaN 78.54 0.65225 78.54 78.378 79.03 0 0 0 0 0.010354 1 46575 51.841 42.484 1 NaN NaN 0 21982000 0 21982000 12497 721 4750 4873 19517 19517 GDVTITNDGATILK 14 1 0 Unmodified _GDVTITNDGATILK_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.3887 2 709.380288 1416.74602 74211.38 0.80174 0.00056874 0.050835 3.6061E-05 0.85258 0.0006048 709.380541115153 713.387414129211 77.654 0.61578 77.654 77.386 78.002 0 189 51 6 0 0 0 9.6638E-05 2 46986 85.813 65.672 1 2.8123 2.837 0 28231000 7369000 20862000 12498 721 4750 4873 19518;19519 19518 GDVTITNDGATILK 14 1 0 Unmodified _GDVTITNDGATILK_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.3875 2 709.380288 1416.74602 74838.44 0.41315 0.00029308 0.13643 9.6783E-05 0.54959 0.00038987 709.88238930366 713.387599724756 90.002 0.42563 90.002 89.764 90.189 0 99 27 6 0 0 0 0.037871 1 49016 28.903 28.903 1 2.3463 1.9015 0 2654200 670810 1983400 12499 721 4750 4873 19520 19520 GDVVLQSDHVIETLTK 16 1 0 Unmodified _GDVVLQSDHVIETLTK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 881.4786 2 877.470166 1752.92578 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.204 1 92.204 91.704 92.704 0 0 0 0 0.0010637 1 55871 56.951 41.75 1 12500 1088;1189 4751 4874 19521 19521 GDVVLQSDHVIETLTK 16 1 0 Unmodified _GDVVLQSDHVIETLTK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.8024 3 585.315869 1752.92578 80737.66 0.71323 0.00041747 0.36449 0.00021334 1.0777 0.00063081 585.650158270678 587.987679095454 92.38 0.65475 92.38 92.04 92.694 0 262 64 6 0 0 0 0.0011137 1 55920 50.053 46.449 1 1.1165 1.2047 0 41783000 17378000 24405000 12501 1088;1189 4751 4874 19522 19522 GDVVLQSDHVIETLTK 16 1 0 Unmodified _GDVVLQSDHVIETLTK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.9881 3 585.315869 1752.92578 80991.89 0.87761 0.00051368 0.45417 0.00026583 1.3318 0.00077951 585.650198910647 587.987591183822 91.212 0.76057 91.212 90.874 91.634 0 268 65 6 0 0 0 0.0057877 1 56387 30.575 30.575 1 1.1843 1.3152 0 49479000 18383000 31096000 12502 1088;1189 4751 4874 19523 19523 GDVVLQSDHVIETLTK 16 1 0 Unmodified _GDVVLQSDHVIETLTK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.4713 2 877.470166 1752.92578 66831.26 0.95475 0.00083777 -0.066 -5.7913E-05 0.88875 0.00077985 877.46995174078 881.477045839051 91.186 0.37119 91.186 91.076 91.448 0 87 34 5 0 0 0 0.00015128 2 56411 67.997 67.997 1 1.2997 1.327 0 17231000 6038600 11192000 12503 1088;1189 4751 4874 19524;19525 19525 GDVVLQSDHVIETLTK 16 1 0 Unmodified _GDVVLQSDHVIETLTK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.988 3 585.315869 1752.92578 79739.48 0.59829 0.00035019 -0.33957 -0.00019876 0.25871 0.00015143 585.649876268353 588.321405790332 105.29 0.38519 105.29 105.11 105.5 0 95 25 6 0 0 0 0.054658 1 60041 11.901 11.901 1 1.6071 1.2762 0 6513300 2115200 4398100 12504 1088;1189 4751 4874 19526 19526 GDVVLQSDHVIETLTK 16 1 0 Unmodified _GDVVLQSDHVIETLTK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 881.4785 2 877.470166 1752.92578 67230.83 0.57713 0.00050641 0.03232 2.836E-05 0.60945 0.00053477 877.47046998047 881.978990362862 105.31 0.33241 105.31 105.15 105.48 -7.6294E-06 68 22 6 0 0 0 0.018424 1 60130 29.491 29.491 1 1.6222 1.2629 0 3353800 1264800 2089000 12505 1088;1189 4751 4874 19527 19527 GDVVLQSDHVIETLTK 16 1 0 Unmodified _GDVVLQSDHVIETLTK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.3213 3 585.315869 1752.92578 81019.59 0.47953 0.00028068 -0.0737 -4.3138E-05 0.40583 0.00023754 585.650031805439 587.987026062655 105.05 0.42456 105.05 104.86 105.29 7.6294E-06 97 27 6 0 0 0 0.0075172 1 59011 18.455 18.455 1 1.6667 1.3563 0 7187100 2186400 5000800 12506 1088;1189 4751 4874 19528 19528 GDYLAVVLATQGHTQVLIHQLSR 23 0 1 Unmodified _GDYLAVVLATQGHTQVLIHQLSR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.7985 3 840.462478 2518.36561 65476.19 0.91895 0.00077234 -0.032371 -2.7207E-05 0.88658 0.00074513 840.797007760866 844.132758745985 126.28 0.50594 126.28 126.06 126.57 -7.6294E-06 117 17 12 0 0 0 1.338E-24 1 75895 125.11 125.11 1 1.252 1.0592 0 30837000 13573000 17264000 12507 1726 4752 4875 19529 19529 GDYLAVVLATQGHTQVLIHQLSR 23 0 1 Unmodified _GDYLAVVLATQGHTQVLIHQLSR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 844.134 3 840.462478 2518.36561 65686.14 0.68002 0.00057154 0.017441 1.4659E-05 0.69747 0.00058619 840.796997166753 843.798489716469 126.04 0.39124 126.04 125.86 126.25 0 66 17 8 0 0 0 4.9698E-13 2 74833 97.974 97.974 1 1.3994 1.1365 0 12169000 4173600 7994900 12508 1726 4752 4875 19530;19531 19530 GDYPLEAVR 9 0 1 Unmodified _GDYPLEAVR_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;Q8WUW7;Q504U3;H3BR70 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.2617 2 510.261456 1018.50836 85212.35 0.1335 6.8122E-05 -0.45774 -0.00023357 -0.32423 -0.00016544 510.261298227028 515.265204296148 58.358 0.86153 58.358 58.013 58.874 0 259 70 6 0 0 0 0.019405 1 33001 51.193 37.417 1 2.525 2.7558 0 51857000 14038000 37819000 12509 1481 4753 4876 19532 19532 GEADILAALK 10 1 0 Unmodified _GEADILAALK_ 0 0 0 A0A024RCP3;Q12899;A2AE48;A0A0G2JIW2 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.7954 2 500.787307 999.560061 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.75 1 95.75 95.25 96.25 0 0 0 0 0.0099272 1 59646 57.59 27.335 1 12510 365 4754 4877 19533 19533 GEAGNSDSMCLR 12 0 1 Unmodified _GEAGNSDSMCLR_ 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 654.2734 2 648.768994 1295.52343 76583.52 0.73087 0.00047417 -0.68266 -0.00044289 0.048217 3.1282E-05 648.768898146906 653.772897644872 33.455 0.25435 33.455 33.309 33.564 0 67 20 5 0 0 0 0.00060413 2 14626 68.525 66.649 1 3.2766 2.7896 0 5438500 1313400 4125100 12511 1569 4755 4878 19534;19535 19534 GEAGNSDSMCLR 12 0 1 Unmodified _GEAGNSDSMCLR_ 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.7737 2 648.768994 1295.52343 76086.77 0.51704 0.00033544 -0.21589 -0.00014007 0.30115 0.00019538 648.769377735235 653.773261411394 33.597 0.25866 33.597 33.45 33.708 0 65 19 5 0 0 0 0.00088435 2 14210 64.374 62.575 1 3.4768 2.8846 0 5257900 1110200 4147600 12512 1569 4755 4878 19536;19537 19536 GEALSALDSK 10 1 0 Unmodified _GEALSALDSK_ 0 0 0 O75396 O75396 O75396 SEC22B Vesicle-trafficking protein SEC22b ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.7655 2 495.758746 989.50294 NaN NaN NaN -0.7574 -0.00037549 NaN NaN NaN NaN 41.965 0.48785 41.965 41.735 42.223 0 0 0 0 0.0044399 1 22139 72.643 37.348 1 NaN NaN 0 18397000 0 18397000 12513 1403 4756 4879 19538 19538 GEALSALDSK 10 1 0 Unmodified _GEALSALDSK_ 0 0 0 O75396 O75396 O75396 SEC22B Vesicle-trafficking protein SEC22b ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.766 2 495.758746 989.50294 NaN NaN NaN -0.0444 -2.2012E-05 NaN NaN NaN NaN 40.796 0.23837 40.796 40.632 40.87 0 0 0 0 0.0044399 1 21796 72.643 34.225 1 NaN NaN 0 29512000 0 29512000 12514 1403 4756 4879 19539 19539 GEALSALDSK 10 1 0 Unmodified _GEALSALDSK_ 0 0 0 O75396 O75396 O75396 SEC22B Vesicle-trafficking protein SEC22b MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.7591 2 495.758746 989.50294 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.734 1 47.734 47.234 48.234 0 0 0 0 0.040589 1 23177 46.819 12.011 1 12515 1403 4756 4879 19540 19540 GEASETLQSPGYDPSRPESFFQQSFQR 27 0 2 Unmodified _GEASETLQSPGYDPSRPESFFQQSFQR_ 0 0 1 A6NHV6;Q0IJ49;B4DZM6;Q99640;I3L136;I3L1H7;I3L4K3;I3L3P0 A6NHV6 A6NHV6 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1032.8132 3 1025.80748 3074.40061 60441.78 0.38572 0.00039567 0.99811 0.0010239 1.3838 0.0014195 1026.14088616333 1032.81466553509 111.95 0.25568 111.95 111.78 112.04 0 54 13 7 0 0 0 0.059309 1 64021 12.346 12.346 1 1.5075 1.3624 0 2938100 899740 2038300 12516 685 4757 4880 19541 19541 GEATVSFDDPPSAK 14 1 0 Unmodified _GEATVSFDDPPSAK_ 0 0 0 B4E312;A0A075B7D9;Q92804;Q70T18;Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637 B4E312;Q70T18 B4E312 TAF15;FUS TATA-binding protein-associated factor 2N;RNA-binding protein FUS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.8398 2 710.833171 1419.65179 71391.59 0.60623 0.00043093 -0.80702 -0.00057366 -0.20079 -0.00014273 710.832499595062 714.839402025619 54.008 0.45199 54.008 53.831 54.283 0 176 36 7 0 0 0 1.6402E-06 1 30285 107.85 107.85 1 1.7287 1.9487 0 75991000 26679000 49312000 12517 399;734 4758 4881 19542 19542 GEATVSFDDPPSAK 14 1 0 Unmodified _GEATVSFDDPPSAK_ 0 0 0 B4E312;A0A075B7D9;Q92804;Q70T18;Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637 B4E312;Q70T18 B4E312 TAF15;FUS TATA-binding protein-associated factor 2N;RNA-binding protein FUS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.8403 2 710.833171 1419.65179 71316.85 0.20843 0.00014816 0.20361 0.00014473 0.41204 0.00029289 710.833380309276 714.839813628512 53.038 0.57363 53.038 52.783 53.357 -3.8147E-06 218 50 7 0 0 0 0.00015261 1 30224 76.326 76.326 1 2.0605 2.2514 0 40379000 11368000 29011000 12518 399;734 4758 4881 19543 19543 GEATVSFDDPPSAK 14 1 0 Unmodified _GEATVSFDDPPSAK_ 0 0 0 B4E312;A0A075B7D9;Q92804;Q70T18;Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637 B4E312;Q70T18 B4E312 TAF15;FUS TATA-binding protein-associated factor 2N;RNA-binding protein FUS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.8405 2 710.833171 1419.65179 72727.84 0.47714 0.00033917 -0.31101 -0.00022108 0.16613 0.00011809 710.833040733635 714.839651052923 62.887 0.63268 62.887 62.507 63.139 0 224 54 6 0 0 0 0.00013865 2 32323 78.692 74.929 1 1.4215 1.1361 0 7025700 3423400 3602300 12519 399;734 4758 4881 19544;19545 19545 GEATVSFDDPPSAK 14 1 0 Unmodified _GEATVSFDDPPSAK_ 0 0 0 B4E312;A0A075B7D9;Q92804;Q70T18;Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637 B4E312;Q70T18 B4E312 TAF15;FUS TATA-binding protein-associated factor 2N;RNA-binding protein FUS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.8401 2 710.833171 1419.65179 72017.46 0.37087 0.00026363 -0.32431 -0.00023053 0.046562 3.3097E-05 710.833121106554 714.839845967149 63.513 0.52169 63.513 63.245 63.766 0 240 48 6 0 0 0 0.00019921 2 31913 69.451 66.937 1 1.3393 1.0929 0 6254200 2494500 3759800 12520 399;734 4758 4881 19546;19547 19546 GEAVCPTCNVVTR 13 0 1 Unmodified _GEAVCPTCNVVTR_ 0 0 0 Q96KM6 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.8465 2 731.842493 1461.67043 71234.13 0.47519 0.00034777 -0.26729 -0.00019561 0.2079 0.00015215 731.842231686922 736.846886160478 49.292 0.43236 49.292 49.069 49.501 0 132 35 6 0 0 0 0.057389 1 24049 32.946 32.946 1 1.8417 1.5954 0 2551300 1085300 1466000 12521 1976 4759 4882 19548 19548 GEAVCPTCNVVTR 13 0 1 Unmodified _GEAVCPTCNVVTR_ 0 0 0 Q96KM6 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.3476 2 731.842493 1461.67043 70138.65 0.33725 0.00024682 -0.022382 -1.638E-05 0.31487 0.00023044 731.842655893258 736.846922120258 49.7 0.53243 49.7 49.458 49.991 0 180 41 6 0 0 0 0.029554 1 23675 42.001 40.59 1 1.8905 1.6179 0 2860900 1095800 1765100 12522 1976 4759 4882 19549 19549 GEAVLRPGLDAEPELSPEEQR 21 0 2 Unmodified _GEAVLRPGLDAEPELSPEEQR_ 0 0 1 C9JQV0;Q9BRJ6;A0A024R836 C9JQV0 C9JQV0 C7orf50;MGC11257 Uncharacterized protein C7orf50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.3889 3 764.720394 2291.13935 70828.93 0.53384 0.00040824 -0.16539 -0.00012648 0.36844 0.00028176 765.054513884349 771.392597877553 78.634 0.48788 78.634 78.369 78.857 0 160 42 6 0 0 0 3.2774E-05 1 47691 41.41 41.41 1 0.83266 0.9202 0 22413000 12428000 9984400 12523 1141 4760 4883 19550 19550 GEAVLRPGLDAEPELSPEEQR 21 0 2 Unmodified _GEAVLRPGLDAEPELSPEEQR_ 0 0 1 C9JQV0;Q9BRJ6;A0A024R836 C9JQV0 C9JQV0 C7orf50;MGC11257 Uncharacterized protein C7orf50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.7264 3 764.720394 2291.13935 70672.26 0.81215 0.00062107 -0.13055 -9.9837E-05 0.6816 0.00052123 764.720458159788 771.392262595148 91.267 0.45142 91.267 91.031 91.482 0 141 29 7 0 0 0 0.0020478 3 50662 28.076 28.076 1 0.51473 0.45763 0 3834600 2348800 1485800 12524 1141 4760 4883 19551;19552;19553 19552 GEAVLRPGLDAEPELSPEEQR 21 0 2 Unmodified _GEAVLRPGLDAEPELSPEEQR_ 0 0 1 C9JQV0;Q9BRJ6;A0A024R836 C9JQV0 C9JQV0 C7orf50;MGC11257 Uncharacterized protein C7orf50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.0555 3 764.720394 2291.13935 70121.09 0.65813 0.00050328 -0.50644 -0.00038729 0.15168 0.000116 765.054392827311 771.726614808601 91.064 0.4125 91.064 90.828 91.241 7.6294E-06 122 25 7 0 0 0 0.00078492 2 49735 33.665 33.665 1 0.51173 0.45869 0 2328100 1512400 815710 12525 1141 4760 4883 19554;19555 19555 GEDEEENNLEVR 12 0 1 Unmodified _GEDEEENNLEVR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.8185 2 716.812967 1431.61138 NaN NaN NaN -0.047431 -3.3999E-05 NaN NaN NaN NaN 33.422 0.5501 33.422 33.112 33.662 0 0 0 0 0.00019656 1 16501 91.549 80.385 1 NaN NaN 0 6418800 0 6418800 12526 1444 4761 4884 19556 19556 GEDEEENNLEVR 12 0 1 Unmodified _GEDEEENNLEVR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.8137 2 716.812967 1431.61138 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.249 1 33.249 32.749 33.749 0 0 0 0 8.6603E-17 1 16545 130.94 71.514 1 12527 1444 4761 4884 19557 19557 GEDEEENNLEVR 12 0 1 Unmodified _GEDEEENNLEVR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.8127 2 716.812967 1431.61138 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.522 1 33.522 33.022 34.022 0 0 0 0 1.3577E-06 1 16706 98.04 69.332 1 12528 1444 4761 4884 19558 19558 GEDEEENNLEVR 12 0 1 Unmodified _GEDEEENNLEVR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.8197 2 716.812967 1431.61138 73217.55 0.42177 0.00030233 0.274 0.00019641 0.69577 0.00049874 716.813051380727 721.817315984383 32.942 0.64359 32.942 32.553 33.197 0 188 59 5 0 0 0 0.00022137 1 16229 88.681 80.755 1 1.2559 1.2524 0 16624000 7312000 9312300 12529 1444 4761 4884 19559 19559 GEDEEENNLEVR 12 0 1 Unmodified _GEDEEENNLEVR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.8176 2 716.812967 1431.61138 72628.13 0.57868 0.00041481 0.23503 0.00016847 0.81371 0.00058328 716.812451390579 721.817314014539 38.683 0.39932 38.683 38.475 38.874 0 109 27 6 0 0 0 0.0010131 1 17625 62.466 58.766 1 0.9738 0.81348 0 3304400 1648900 1655500 12530 1444 4761 4884 19560 19560 GEDEEENNLEVR 12 0 1 Unmodified _GEDEEENNLEVR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.8163 2 716.812967 1431.61138 75572.21 0.40702 0.00029176 0.076645 5.494E-05 0.48367 0.0003467 717.31499365281 721.817137315265 38.914 0.37422 38.914 38.741 39.115 0 90 29 4 0 0 0 0.037464 1 17265 34.695 31.756 1 0.98644 0.84249 0 2893400 1695300 1198200 12531 1444 4761 4884 19561 19561 GEDEEMADPMEDVIIR 16 0 1 2 Oxidation (M) _GEDEEM(ox)ADPM(ox)EDVIIR_ GEDEEM(1)ADPM(1)EDVIIR GEDEEM(57.02)ADPM(57.02)EDVIIR 0 2 0 B3KMR5;Q5JTH9;B3KY97;B3KPQ2 B3KMR5 B3KMR5 RRP12 RRP12-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.9014 2 940.898056 1879.78156 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.527 1 68.527 68.027 69.027 0 0 0 0 0.00081103 1 39713 57.019 51.174 1 12532 907 4762 4885 19562 19562 730;731 GEDLTEEEDGGIIR 14 0 1 Unmodified _GEDLTEEEDGGIIR_ 0 0 0 B2R9U2;Q02790 B2R9U2 B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.8619 2 766.857374 1531.7002 NaN NaN NaN -0.11372 -8.721E-05 NaN NaN NaN NaN 67.333 0.42684 67.333 67.213 67.64 0 0 0 0 5.1424E-06 1 39910 94.465 80.259 1 NaN NaN 0 4831600 0 4831600 12533 868 4763 4886 19563 19563 GEDLTSEHPLLEQVELPAVASVSASVIK 28 1 0 Unmodified _GEDLTSEHPLLEQVELPAVASVSASVIK_ 0 0 0 A5YM43;Q8NDX5;E7EX82;B4E2T1;H7C4H9 A5YM43 A5YM43 PHC3 Polyhomeotic-like protein 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 976.1055 3 973.516754 2917.52843 63299.51 0.55259 0.00053796 -0.031239 -3.0412E-05 0.52135 0.00050755 974.184344545097 976.523084686314 124.54 0.37788 124.54 124.3 124.67 7.6294E-06 66 25 5 0 0 0 0.0017129 1 80854 34.781 34.781 1 0.82687 0.81598 0 9278500 3458500 5820000 12534 677 4764 4887 19564 19564 GEDLTSEHPLLEQVELPAVASVSASVIK 28 1 0 Unmodified _GEDLTSEHPLLEQVELPAVASVSASVIK_ 0 0 0 A5YM43;Q8NDX5;E7EX82;B4E2T1;H7C4H9 A5YM43 A5YM43 PHC3 Polyhomeotic-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 973.8523 3 973.516754 2917.52843 63033.1 0.56071 0.00054586 0.39368 0.00038325 0.95438 0.00092911 973.851160129387 976.856791624135 124.07 0.41735 124.07 123.87 124.29 0 110 28 6 0 0 0 0.00056991 1 82508 26.187 26.187 1 1.0381 1.0489 0 8508700 2884600 5624100 12535 677 4764 4887 19565 19565 GEDSVPDTVHHVVVPVNPK 19 1 0 Unmodified _GEDSVPDTVHHVVVPVNPK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.6892 3 675.684844 2024.0327 73248.34 0.60593 0.00040942 0.32362 0.00021866 0.92955 0.00062808 675.685093737176 678.691097066512 64.182 0.99806 64.182 63.624 64.622 0 355 60 8 0 0 0 1.9603E-12 2 36834 103.5 103.5 1 1.2814 1.4365 0 65134000 29770000 35364000 12536 452 4765 4888 19566;19567 19567 GEDSVPDTVHHVVVPVNPK 19 1 0 Unmodified _GEDSVPDTVHHVVVPVNPK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.3575 3 675.684844 2024.0327 73428.95 0.55133 0.00037253 0.49069 0.00033155 1.042 0.00070408 676.019562986703 678.356735478853 72.749 0.58961 72.749 72.462 73.052 0 272 41 10 0 0 0 2.494E-06 1 38404 75.97 75.97 1 1.5283 1.1865 0 12726000 5468000 7257600 12537 452 4765 4888 19568 19568 GEDSVPDTVHHVVVPVNPK 19 1 0 Unmodified _GEDSVPDTVHHVVVPVNPK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.3568 3 675.684844 2024.0327 73530.69 0.50111 0.0003386 0.25655 0.00017335 0.75767 0.00051194 676.019327454508 678.690962153015 73.056 0.84259 73.056 72.623 73.466 0 266 52 8 0 0 0 8.3806E-06 1 37802 57.788 57.788 1 1.6466 1.3557 0 12154000 4906000 7247800 12538 452 4765 4888 19569 19569 GEEEDPEVNVEMSLQDEIQR 20 0 1 Oxidation (M) _GEEEDPEVNVEM(ox)SLQDEIQR_ GEEEDPEVNVEM(1)SLQDEIQR GEEEDPEVNVEM(88.09)SLQDEIQR 0 1 0 Q5TDG3;Q9UNX4;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1187.0276 2 1181.52118 2361.02781 56611.39 0.38568 0.00045569 -0.10888 -0.00012864 0.2768 0.00032704 1181.52116174904 1187.02669501778 101 0.58006 101 100.66 101.24 7.6294E-06 229 42 7 0 0 0 4.496E-09 1 61787 88.087 85.3 1 1.2592 1.2773 0 28762000 9393500 19369000 12539 1827 4766 4889 19570 19570 1683 GEEEDPEVNVEMSLQDEIQR 20 0 1 Oxidation (M) _GEEEDPEVNVEM(ox)SLQDEIQR_ GEEEDPEVNVEM(1)SLQDEIQR GEEEDPEVNVEM(146.96)SLQDEIQR 0 1 0 Q5TDG3;Q9UNX4;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1186.5286 2 1181.52118 2361.02781 55936.21 0.1192 0.00014084 -0.018279 -2.1597E-05 0.10092 0.00011924 1182.02261449218 1187.02676412608 101.5 0.57233 101.5 101.21 101.79 0 262 43 8 0 0 0 1.1857E-31 3 62368 146.96 146.96 1 1.2343 1.2523 0 18187000 7394800 10792000 12540 1827 4766 4889 19571;19572;19573 19572 1683 GEEEDPEVNVEMSLQDEIQR 20 0 1 Oxidation (M) _GEEEDPEVNVEM(ox)SLQDEIQR_ GEEEDPEVNVEM(1)SLQDEIQR GEEEDPEVNVEM(54.09)SLQDEIQR 0 1 0 Q5TDG3;Q9UNX4;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1181.5214 2 1181.52118 2361.02781 56417.52 0.081535 9.6335E-05 0.42957 0.00050755 0.51111 0.00060388 1181.52168297309 1187.02758374099 100.36 0.55945 100.36 100.13 100.69 0 208 45 7 0 0 0 3.0294E-06 1 62948 54.09 53.006 1 1.2044 1.3196 0 31330000 13998000 17332000 12541 1827 4766 4889 19574 19574 1683 GEEEDPEVNVEMSLQDEIQR 20 0 1 Oxidation (M) _GEEEDPEVNVEM(ox)SLQDEIQR_ GEEEDPEVNVEM(1)SLQDEIQR GEEEDPEVNVEM(135.02)SLQDEIQR 0 1 0 Q5TDG3;Q9UNX4;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1186.5249 2 1181.52118 2361.02781 56147.13 -0.10715 -0.0001266 0.029495 3.4849E-05 -0.077653 -9.1748E-05 1182.02285625662 1187.02732207885 100.96 0.64368 100.96 100.59 101.23 0 255 49 7 0 0 0 4.1483E-24 2 63510 135.02 135.02 1 1.2044 1.2316 0 20854000 10689000 10165000 12542 1827 4766 4889 19575;19576 19575 1683 GEEILSGAQR 10 0 1 Unmodified _GEEILSGAQR_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;H7BZ35 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2797 2 530.275095 1058.53564 83372.87 0.52138 0.00027647 0.29442 0.00015612 0.81579 0.00043259 530.275266657707 535.279601681567 33.59 0.63842 33.59 33.237 33.875 0 141 62 4 0 0 0 0.0083024 2 16625 56.258 7.4639 1 1.0674 1.1116 0 13419000 6113800 7305200 12543 610 4767 4890 19577;19578 19577 GEELGPGNVQK 11 1 0 Unmodified _GEELGPGNVQK_ 0 0 0 Q9Y6C9;Q53G34 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.2955 2 564.288202 1126.56185 NaN NaN NaN -0.55701 -0.00031431 NaN NaN NaN NaN 28.054 0.35601 28.054 27.857 28.213 0 0 0 0 0.00097478 1 13142 86.67 59.416 1 NaN NaN 0 5510600 0 5510600 12544 2152 4768 4891 19579 19579 GEELLSPLNLEQAAYAR 17 0 1 Unmodified _GEELLSPLNLEQAAYAR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.4882 2 937.486347 1872.95814 63085.63 0.48149 0.00045139 -0.36549 -0.00034265 0.11599 0.00010874 937.484791074908 942.490534417482 115.33 0.6143 115.33 115.05 115.66 -7.6294E-06 203 40 8 0 0 0 1.701E-12 2 73262 114.72 105.72 1 1.3102 1.3512 0 24279000 10747000 13532000 12545 1088;1189 4769 4892 19580;19581 19580 GEELLSPLNLEQAAYAR 17 0 1 Unmodified _GEELLSPLNLEQAAYAR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 942.9922 2 937.486347 1872.95814 NaN NaN NaN 0.037878 3.551E-05 NaN NaN NaN NaN 114.77 0.74135 114.77 114.29 115.03 0 0 0 0 2.0438E-11 1 74657 105.65 91.84 1 NaN NaN 0 16881000 0 16881000 12546 1088;1189 4769 4892 19582 19582 GEENLMDAQVK 11 1 0 Oxidation (M) _GEENLM(ox)DAQVK_ GEENLM(1)DAQVK GEENLM(88.5)DAQVK 0 1 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.2975 2 625.290085 1248.56562 NaN NaN NaN -0.30894 -0.00019318 NaN NaN NaN NaN 28.271 0.21045 28.271 28.196 28.406 0 0 0 0 0.00022547 1 13316 88.495 67.032 1 NaN NaN 0 4444000 0 4444000 12547 1592 4770 4893 19583 19583 1373 GEENLMDAQVK 11 1 0 Oxidation (M) _GEENLM(ox)DAQVK_ GEENLM(1)DAQVK GEENLM(79.97)DAQVK 0 1 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.2971 2 625.290085 1248.56562 NaN NaN NaN 0.47057 0.00029424 NaN NaN NaN NaN 27.659 0.20356 27.659 27.591 27.795 0 0 0 0 0.00058546 1 12963 79.974 51.056 1 NaN NaN 0 7922100 0 7922100 12548 1592 4770 4893 19584 19584 1373 GEEPDIAVPK 10 1 0 Unmodified _GEEPDIAVPK_ 0 0 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.7818 2 527.774396 1053.53424 85060.16 0.39832 0.00021022 0.29484 0.00015561 0.69316 0.00036583 527.774540176143 531.781442085691 55.323 0.59818 55.323 54.938 55.537 0 192 58 4 0 0 0 0.0026988 2 31019 67.897 67.897 1 0.85475 0.86057 0 27140000 15439000 11700000 12549 1307 4771 4894 19585;19586 19585 GEEPDIAVPK 10 1 0 Unmodified _GEEPDIAVPK_ 0 0 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.7808 2 527.774396 1053.53424 84329.7 0.38809 0.00020482 -0.099386 -5.2453E-05 0.2887 0.00015237 527.774286715211 531.781251313321 54.398 0.59014 54.398 54.021 54.612 0 165 50 4 0 0 0 0.0022794 2 30979 69.812 69.812 1 0.93258 0.93879 0 27710000 15986000 11724000 12550 1307 4771 4894 19587;19588 19587 GEEPDIAVPK 10 1 0 Unmodified _GEEPDIAVPK_ 0 0 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.7748 2 527.774396 1053.53424 84616.63 0.17291 9.1257E-05 0.16737 8.8333E-05 0.34028 0.00017959 527.774473303837 531.781570701796 64.838 0.63093 64.838 64.466 65.097 7.6294E-06 264 52 8 0 0 0 0.048819 1 32611 36.381 27.167 1 0.85871 0.69045 0 4242600 2235500 2007100 12551 1307 4771 4894 19589 19589 GEETPVIVGSALCALEGR 18 0 1 Unmodified _GEETPVIVGSALCALEGR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.9747 2 929.472383 1856.93021 62551.96 0.7753 0.00072062 -0.49582 -0.00046085 0.27948 0.00025977 929.973872227695 934.476138333083 120.04 0.64262 120.04 119.7 120.34 0 190 44 7 0 0 0 1.2013E-22 2 77283 134.68 134.68 1 1.9129 1.9567 0 35413000 13178000 22235000 12552 1580 4772 4895 19590;19591 19591 GEETPVIVGSALCALEGR 18 0 1 Unmodified _GEETPVIVGSALCALEGR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 934.4774 2 929.472383 1856.93021 62513.71 0.68274 0.00063459 -0.54351 -0.00050518 0.13924 0.00012942 929.47240704587 934.977298926851 119.58 0.55881 119.58 119.29 119.85 0 189 40 6 0 0 0 1.4504E-05 2 78755 76.588 76.588 1 1.7827 1.9487 0 36028000 13356000 22672000 12553 1580 4772 4895 19592;19593 19593 GEETPVIVGSALCALEGR 18 0 1 Unmodified _GEETPVIVGSALCALEGR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 934.9789 2 929.472383 1856.93021 61485.72 1.2039 0.001119 -0.28056 -0.00026078 0.92337 0.00085825 929.974383112979 934.476101264546 132.81 0.37167 132.81 132.64 133.01 0 80 16 7 0 0 0 0.00028802 2 80796 46.964 46.964 1 1.1142 0.94981 0 5562700 2629900 2932800 12554 1580 4772 4895 19594;19595 19595 GEETPVIVGSALCALEGRDPELGLK 25 1 1 Unmodified _GEETPVIVGSALCALEGRDPELGLK_ 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.1276 3 870.786299 2609.33707 65644.32 0.6486 0.0005648 -0.15486 -0.00013485 0.49374 0.00042994 871.120502853072 876.793987907644 121.78 0.61539 121.78 121.54 122.15 0 264 44 9 0 0 0 3.8699E-09 3 80616 51.398 51.398 1 1.9047 2.1772 0 21606000 7032600 14573000 12555 1580 4773 4896 19596;19597;19598 19596 GEETVLGGGTR 11 0 1 Unmodified _GEETVLGGGTR_ 0 0 0 Q5T3I0;A8KAG1 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.2766 2 538.272552 1074.53055 NaN NaN NaN 0.11099 5.9744E-05 NaN NaN NaN NaN 30.044 0.19751 30.044 29.954 30.152 1.9073E-06 0 0 0 5.8948E-05 1 14656 98.048 65.728 1 NaN NaN 0 9303100 0 9303100 12556 1820 4774 4897 19599 19599 GEFGGFGSVTGK 12 1 0 Unmodified _GEFGGFGSVTGK_ 0 0 0 Q6FHQ0;Q16576;A8K6A2;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.7778 2 571.77747 1141.54039 NaN NaN NaN 0.20724 0.0001185 NaN NaN NaN NaN 67.645 1.2163 67.645 66.897 68.113 0 0 0 0 0.00019656 1 38852 91.549 68.97 1 NaN NaN 0 55909000 55909000 0 12557 1771 4775 4898 19600 19600 GEFGGFGSVTGK 12 1 0 Unmodified _GEFGGFGSVTGK_ 0 0 0 Q6FHQ0;Q16576;A8K6A2;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.7851 2 571.77747 1141.54039 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.086 1 67.086 66.586 67.586 0 0 0 0 0.0055383 1 38749 63.408 46.023 1 12558 1771 4775 4898 19601 19601 GEFGGFGSVTGK 12 1 0 Unmodified _GEFGGFGSVTGK_ 0 0 0 Q6FHQ0;Q16576;A8K6A2;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.7784 2 571.77747 1141.54039 NaN NaN NaN -0.1533 -8.7655E-05 NaN NaN NaN NaN 66.605 1.0436 66.605 65.821 66.864 0 0 0 0 0.0047451 1 39033 63.415 43.819 1 NaN NaN 0 58508000 58508000 0 12559 1771 4775 4898 19602 19602 GEFGGFGSVTGK 12 1 0 Unmodified _GEFGGFGSVTGK_ 0 0 0 Q6FHQ0;Q16576;A8K6A2;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.7847 2 571.77747 1141.54039 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.111 1 66.111 65.611 66.611 0 0 0 0 0.0002114 1 39051 84.658 68.456 1 12560 1771 4775 4898 19603 19603 GEFGGFGSVTGK 12 1 0 Unmodified _GEFGGFGSVTGK_ 0 0 0 Q6FHQ0;Q16576;A8K6A2;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.7775 2 571.77747 1141.54039 NaN NaN NaN 0.32671 0.00018681 NaN NaN NaN NaN 77.345 0.75089 77.345 76.972 77.722 0 0 0 0 0.013633 1 41345 53.569 39.799 1 NaN NaN 0 3736500 3736500 0 12561 1771 4775 4898 19604 19604 GEFSDFHGPPK 11 1 0 Unmodified _GEFSDFHGPPK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9;A0A0A0MSJ1 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.2844 2 609.28292 1216.55129 78698.88 0.44632 0.00027193 -0.50904 -0.00031015 -0.06273 -3.822E-05 609.283186382646 613.289743198158 40.181 0.39396 40.181 40.024 40.418 0 128 33 5 0 0 0 0.00076687 2 20925 72.643 56.981 1 1.1278 1.164 0 29029000 13843000 15186000 12562 104 4776 4899 19605;19606 19605 GEFTIETEGK 10 1 0 Unmodified _GEFTIETEGK_ 0 0 0 A0A090N8G0;P41250;H7C443 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.7765 2 555.769311 1109.52407 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.581 1 47.581 47.081 48.081 3.8147E-06 0 0 0 1.0717E-05 1 26479 97.635 60.086 1 12563 457 4777 4900 19607 19607 GEFVVSLDDGWIR 13 0 1 Unmodified _GEFVVSLDDGWIR_ 0 0 0 Q6P158;Q59G60;H7C109;Q8N4U2 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.8762 2 746.875173 1491.73579 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.33 1 117.33 116.83 117.83 0 0 0 0 0.0030136 1 76931 65.5 47.636 1 12564 1850 4778 4901 19608 19608 GEGAGPPPPLPPAQPGAEGGGDR 23 0 1 Unmodified _GEGAGPPPPLPPAQPGAEGGGDR_ 0 0 0 Q9NVI7;Q96T67;Q5T9A4 Q9NVI7 Q9NVI7 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1046.011 2 1041.00597 2079.99738 NaN NaN NaN 0.20674 0.00021522 NaN NaN NaN NaN 64.547 0.74977 64.547 64.209 64.959 0 0 0 0 9.4612E-05 1 36935 46.926 34.365 1 NaN NaN 0 6443200 0 6443200 12565 2074 4779 4902 19609 19609 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 1 Unmodified _GEGDAPFSEPGTTSTQRPSSPETATK_ 0 0 1 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8;I3L1I8;A0A087X1W1 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.418 3 879.075454 2634.20453 65996.05 0.52745 0.00046367 -0.041536 -3.6513E-05 0.48591 0.00042715 879.075252628022 885.417213382986 45.742 0.28414 45.742 45.563 45.847 -3.8147E-06 73 24 5 0 0 0 5.8745E-06 2 25090 37.526 37.526 1 3.1933 3.5497 0 10517000 2293000 8223800 12566 619 4780 4903 19610;19611 19610 GEGEDEVEEESTALQK 16 1 0 Unmodified _GEGEDEVEEESTALQK_ 0 0 0 Q96T23;H0YCN2;H0YEX0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 875.3882 2 875.386693 1748.75883 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.81 1 50.81 50.31 51.31 3.8147E-06 0 0 0 1.787E-18 1 28073 128.85 114.61 1 12567 1991 4781 4904 19612 19612 GEGEDEVEEESTALQK 16 1 0 Unmodified _GEGEDEVEEESTALQK_ 0 0 0 Q96T23;H0YCN2;H0YEX0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 875.3878 2 875.386693 1748.75883 NaN NaN NaN -0.72771 -0.00063702 NaN NaN NaN NaN 49.766 0.26226 49.766 49.64 49.903 -3.8147E-06 0 0 0 3.9323E-13 1 28048 116.24 94.866 1 NaN NaN 0 4044700 4044700 0 12568 1991 4781 4904 19613 19613 GEGGILINSQGER 13 0 1 Unmodified _GEGGILINSQGER_ 0 0 0 D6RFM5;A0A024QZ30;B4DYN5;P31040;A0A087X1I3;Q0QF12;B3KT34;B7Z6J5 D6RFM5 D6RFM5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.3423 2 665.341498 1328.66844 76108.28 0.68075 0.00045293 0.16972 0.00011292 0.85047 0.00056585 665.341365993718 670.345670326937 48.924 0.44273 48.924 48.716 49.158 3.8147E-06 129 35 5 0 0 0 9.961E-05 4 26730 92.611 71.78 1 0.45619 0.47381 0 20816000 14715000 6101000 12569 10 4782 4905 19614;19615;19616;19617 19616 GEGQLGPAER 10 0 1 Unmodified _GEGQLGPAER_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2582 2 507.254163 1012.49377 85968.29 -0.067188 -3.4081E-05 -0.03857 -1.9565E-05 -0.10576 -5.3646E-05 507.254207370502 512.25813030288 21.877 0.83327 21.877 21.501 22.335 0 148 49 5 0 0 0 1.4773E-05 2 8046 101.65 47.662 1 3.1015 3.4346 0 62648000 14447000 48201000 12570 1478 4783 4906 19618;19619 19618 GEGTEQEPSTTPEADDDGRR 20 0 2 Unmodified _GEGTEQEPSTTPEADDDGRR_ 0 0 1 D3DWL9;Q10570 D3DWL9 D3DWL9 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.9816 3 716.308831 2145.90466 NaN NaN NaN 0.099191 7.1052E-05 NaN NaN NaN NaN 19.616 0.2001 19.616 19.536 19.736 0 0 0 0 0.0038571 1 6195 36.637 23.6 1 NaN NaN 0 2916900 0 2916900 12571 1198 4784 4907 19620 19620 GEGTEQEPSTTPEADDDGRR 20 0 2 Unmodified _GEGTEQEPSTTPEADDDGRR_ 0 0 1 D3DWL9;Q10570 D3DWL9 D3DWL9 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.9814 3 716.308831 2145.90466 NaN NaN NaN -0.34263 -0.00024543 NaN NaN NaN NaN 19.486 0.30443 19.486 19.336 19.64 -1.9073E-06 0 0 0 0.0072827 1 5927 30.767 1.1865 1 NaN NaN 0 3967300 0 3967300 12572 1198 4784 4907 19621 19621 GEHPGLSIGDVAK 13 1 0 Unmodified _GEHPGLSIGDVAK_ 0 0 0 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;B2RPK0;P09429;B3KQ05 Q5T7C4 Q5T7C4 HMGB1;HMGB1P1 Putative high mobility group protein B1-like 1;High mobility group protein B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.3431 2 640.335684 1278.65681 76579.13 0.71293 0.00045652 0.29842 0.00019109 1.0113 0.0006476 640.335731487632 644.343052175125 50.746 0.41498 50.746 50.44 50.855 0 111 39 5 0 0 0 0.00013042 1 27994 90.05 79.742 1 0.57618 0.62429 0 44040000 29591000 14450000 12573 392 4785 4908 19622 19622 GEHPGLSIGDVAK 13 1 0 Unmodified _GEHPGLSIGDVAK_ 0 0 0 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;B2RPK0;P09429;B3KQ05 Q5T7C4 Q5T7C4 HMGB1;HMGB1P1 Putative high mobility group protein B1-like 1;High mobility group protein B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.3376 2 640.335684 1278.65681 76579.15 0.34278 0.0002195 0.61868 0.00039617 0.96147 0.00061566 640.336056777456 644.342899890356 50.902 0.3597 50.902 50.831 51.191 0 125 32 5 0 0 0 0.00014095 1 28119 82.171 82.171 1 0.57794 0.58176 0 27125000 14980000 12144000 12574 392 4785 4908 19623 19623 GEIDAHEDSFK 11 1 0 Unmodified _GEIDAHEDSFK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.288 2 624.280574 1246.5466 75487.83 0.56612 0.00035342 -0.85729 -0.00053519 -0.29117 -0.00018177 624.28016439289 628.287416328271 27.938 0.28033 27.938 27.779 28.059 0 88 17 7 0 0 0 1.0992E-05 2 13058 108.43 108.43 1 1.5293 1.5525 0 27813000 11658000 16156000 12575 523 4786 4909 19624;19625 19625 GEIDAHEDSFK 11 1 0 Unmodified _GEIDAHEDSFK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.2799 2 624.280574 1246.5466 75653.34 0.38723 0.00024174 -0.60208 -0.00037587 -0.21485 -0.00013412 624.280403120676 628.287594564168 27.328 0.23562 27.328 27.205 27.441 -1.9073E-06 51 12 6 0 0 0 4.2578E-06 2 12612 111.06 87.533 1 1.6177 1.744 0 21738000 8138400 13599000 12576 523 4786 4909 19626;19627 19626 GEIDAHEDSFK 11 1 0 Unmodified _GEIDAHEDSFK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.2878 2 624.280574 1246.5466 NaN NaN NaN -0.048783 -3.0455E-05 NaN NaN NaN NaN 31.948 0.2976 31.948 31.83 32.128 0 0 0 0 0.0060651 1 13617 64.103 49.437 1 NaN NaN 0 2407900 0 2407900 12577 523 4786 4909 19628 19628 GEIEVVTSSLPELYVEK 17 1 0 Unmodified _GEIEVVTSSLPELYVEK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 950.5071 2 946.498589 1890.98263 62388.09 0.99272 0.00093961 -0.22444 -0.00021244 0.76828 0.00072717 946.498636966445 951.006739035644 128.12 0.8925 128.12 127.76 128.65 0 188 36 10 0 0 0 3.6053E-09 2 77181 106.32 106.32 1 1.206 1.0326 0 73207000 32311000 40895000 12578 1756 4787 4910 19629;19630 19629 GEIEVVTSSLPELYVEK 17 1 0 Unmodified _GEIEVVTSSLPELYVEK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 951.0065 2 946.498589 1890.98263 62989.77 0.71235 0.00067423 0.12569 0.00011897 0.83804 0.0007932 947.000074210944 950.505581874695 127.95 0.67551 127.95 127.65 128.32 -7.6294E-06 164 27 10 0 0 0 1.2639E-06 1 76163 88.552 88.552 1 1.2951 1.0978 0 64157000 30892000 33265000 12579 1756 4787 4910 19631 19631 GEILIGGQSVTMGYYK 16 1 0 Oxidation (M) _GEILIGGQSVTM(ox)GYYK_ GEILIGGQSVTM(1)GYYK GEILIGGQSVTM(58.17)GYYK 0 1 0 B3KN05;B2RBE0;A0A024R497;O95573;B3KMA6 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.944 2 866.434738 1730.85492 NaN NaN NaN -0.28599 -0.00024779 NaN NaN NaN NaN 85.751 0.39227 85.751 85.479 85.871 0 0 0 0 0.00091757 1 52700 58.172 43.296 1 NaN NaN 0 8157300 0 8157300 12580 150 4788 4911 19632 19632 128 GEIVVIGATNR 11 0 1 Unmodified _GEIVVIGATNR_ 0 0 0 A0A024R9G7;Q6PL18;Q9ULI0 A0A024R9G7;Q9ULI0 A0A024R9G7 ATAD2;ATAD2B ATPase family AAA domain-containing protein 2;ATPase family AAA domain-containing protein 2B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8224 2 564.822212 1127.62987 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.326 1 61.326 60.826 61.826 0 0 0 0 0.027542 1 35917 50.108 16.311 1 12581 278;2108 4789 4912 19633 19633 GEIVVIGATNR 11 0 1 Unmodified _GEIVVIGATNR_ 0 0 0 A0A024R9G7;Q6PL18;Q9ULI0 A0A024R9G7;Q9ULI0 A0A024R9G7 ATAD2;ATAD2B ATPase family AAA domain-containing protein 2;ATPase family AAA domain-containing protein 2B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.8227 2 564.822212 1127.62987 80039.51 0.36204 0.00020449 1.0661 0.00060215 1.4281 0.00080664 564.822663428466 569.826009613904 71.561 0.37919 71.561 71.375 71.754 0 93 27 5 0 0 0 0.060689 1 37705 33.229 20.439 1 1.8104 1.572 0 2201700 666310 1535400 12582 278;2108 4789 4912 19634 19634 GELANEVK 8 1 0 Unmodified _GELANEVK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.2365 2 430.229625 858.444697 NaN NaN NaN -0.033866 -1.457E-05 NaN NaN NaN NaN 24.049 0.30179 24.049 23.936 24.237 0 0 0 0 0.027969 1 9852 60.508 19.32 1 NaN NaN 0 11954000 0 11954000 12583 81 4790 4913 19635 19635 GELAWIIYK 9 1 0 Unmodified _GELAWIIYK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.8152 2 546.808042 1091.60153 82656.29 0.65202 0.00035653 -0.13549 -7.4086E-05 0.51653 0.00028244 546.808012003543 550.815025646579 105.66 0.77698 105.66 105.3 106.08 0 128 58 4 0 0 0 0.0021719 3 65607 75.854 75.854 1 0.85618 0.84218 0 8660800 4863100 3797700 12584 925 4791 4914 19636;19637;19638 19637 GELAWIIYK 9 1 0 Unmodified _GELAWIIYK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.8152 2 546.808042 1091.60153 82938.42 0.381 0.00020833 -0.17638 -9.6446E-05 0.20462 0.00011189 546.807917242919 550.815065736996 117.14 0.509 117.14 116.9 117.41 0 79 22 5 0 0 0 0.032687 1 68898 44.961 44.961 1 1.4113 1.1347 0 2833300 1197700 1635600 12585 925 4791 4914 19639 19639 GELAWIIYK 9 1 0 Unmodified _GELAWIIYK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.8168 2 546.808042 1091.60153 82836.16 0.62314 0.00034074 -0.27807 -0.00015205 0.34507 0.00018869 546.807940419929 550.81509064277 116.87 0.48454 116.87 116.66 117.15 0 77 21 5 0 0 0 0.021489 1 67784 49.442 41.962 1 1.5983 1.2583 0 2282900 889830 1393100 12586 925 4791 4914 19640 19640 GELDDNGDLKK 11 2 0 Unmodified _GELDDNGDLKK_ 0 0 1 J3KQ70;B4DJ31;Q9C086;B8ZZ93;B8ZZH7;F8WCL7;B4DJ22;C9JKY0 J3KQ70 J3KQ70 INO80B-WBP1;INO80B INO80 complex subunit B MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.947 2 602.296224 1202.5779 81693.84 0.46649 0.00028097 0.062207 3.7467E-05 0.5287 0.00031843 602.296245801148 610.310278911091 20.45 0.30537 20.45 20.322 20.627 0 27 13 4 0 0 0 0.035863 1 6862 45.368 25.064 1 0.80402 0.90665 0 6844000 4347700 2496300 12587 985 4792 4915 19641 19641 GENLENIEPLQVSFAVLSSPNK 22 1 0 Unmodified _GENLENIEPLQVSFAVLSSPNK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1197.6257 2 1193.11845 2384.22235 57037.73 0.24727 0.00029502 0.52945 0.00063169 0.77672 0.00092672 1193.61991412245 1197.62724137534 127.63 0.37252 127.63 127.44 127.81 0 73 25 5 0 0 0 6.1663E-05 1 83155 39.509 39.509 1 0.65918 0.66511 0 7048000 4191700 2856300 12588 1233 4793 4916 19642 19642 GENLENIEPLQVSFAVLSSPNK 22 1 0 Unmodified _GENLENIEPLQVSFAVLSSPNK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1193.6179 2 1193.11845 2384.22235 59543.66 0.1122 0.00013386 0.51638 0.00061611 0.62858 0.00074997 1193.61981499586 1197.12625646392 127.31 0.41775 127.31 127.06 127.47 0 81 25 7 0 0 0 3.3521E-11 2 84981 90.707 85.906 1 0.53419 0.53852 0 7574000 4659700 2914300 12589 1233 4793 4916 19643;19644 19643 GENLVSMTVEGPPPK 15 1 0 Oxidation (M) _GENLVSM(ox)TVEGPPPK_ GENLVSM(1)TVEGPPPK GENLVSM(62.34)TVEGPPPK 0 1 0 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q53HE7;Q9UIS4;Q15182;P63162;P14678;Q6LBS1 J3QLE5 J3QLE5 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.8933 2 785.892706 1569.77086 69745.02 0.55294 0.00043455 0.7244 0.0005693 1.2773 0.0010039 785.893070327551 789.900649650041 61.361 0.9683 61.361 60.801 61.769 -3.8147E-06 207 71 4 0 0 0 0.00010615 2 35117 62.338 62.338 1 1.6548 1.6807 0 13365000 4368200 8996800 12590 1041 4794 4917 19645;19646 19646 814 GENLVSMTVEGPPPK 15 1 0 Oxidation (M) _GENLVSM(ox)TVEGPPPK_ GENLVSM(1)TVEGPPPK GENLVSM(95.4)TVEGPPPK 0 1 0 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q53HE7;Q9UIS4;Q15182;P63162;P14678;Q6LBS1 J3QLE5 J3QLE5 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.4026 2 785.892706 1569.77086 68731.71 0.5631 0.00044254 0.52983 0.00041639 1.0929 0.00085893 785.893693161257 789.900637118064 60.072 0.61217 60.072 59.816 60.428 0 219 39 9 0 0 0 3.2962E-06 2 34964 95.401 89.16 1 1.5399 1.6171 0 34866000 12491000 22376000 12591 1041 4794 4917 19647;19648 19647 814 GENPFEIQDHSQDQQIEGDEEDEEK 25 1 0 Unmodified _GENPFEIQDHSQDQQIEGDEEDEEK_ 0 0 0 Q5BKZ1;A0A0A0MRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.4177 3 982.411231 2944.21186 62677.54 0.097412 9.5698E-05 0.3334 0.00032754 0.43081 0.00042324 982.74568856512 985.417254798556 67.269 0.47554 67.269 67.009 67.484 0 204 37 7 0 0 0 0.014758 2 38952 19.986 19.986 1 1.6483 1.7417 0 15573000 6750100 8823000 12592 1804 4795 4918 19649;19650 19650 GENPFEIQDHSQDQQIEGDEEDEEK 25 1 0 Unmodified _GENPFEIQDHSQDQQIEGDEEDEEK_ 0 0 0 Q5BKZ1;A0A0A0MRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 985.4167 3 982.411231 2944.21186 63117.43 0.26322 0.00025859 -0.31376 -0.00030824 -0.050542 -4.9653E-05 983.07943977856 985.416836316696 66.295 0.40858 66.295 66.1 66.509 0 181 32 7 0 0 0 2.1355E-06 3 39105 45.611 45.611 1 1.4493 1.571 0 22161000 9495700 12665000 12593 1804 4795 4918 19651;19652;19653 19651 GEPETFLPLDYLEVKPTDEK 20 2 0 Unmodified _GEPETFLPLDYLEVKPTDEK_ 0 0 1 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.3939 3 774.058013 2319.15221 68900.84 0.75075 0.00058112 -0.070017 -5.4198E-05 0.68073 0.00052692 774.392795228015 779.734286973301 117.8 0.71269 117.8 117.41 118.12 -7.6294E-06 225 44 9 0 0 0 3.4525E-07 2 75375 73.294 73.294 1 0.75795 0.89561 0 32713000 19995000 12718000 12594 1739 4796 4919 19654;19655 19655 GEPETFLPLDYLEVKPTDEK 20 2 0 Unmodified _GEPETFLPLDYLEVKPTDEK_ 0 0 1 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.3942 3 774.058013 2319.15221 69287.09 0.65293 0.0005054 0.0035056 2.7136E-06 0.65643 0.00050812 774.392964929807 779.734430062362 117.26 0.5365 117.26 116.94 117.48 7.6294E-06 210 31 9 0 0 0 1.8758E-06 1 76723 41.615 34.503 1 0.80311 0.92861 0 35751000 19421000 16329000 12595 1739 4796 4919 19656 19656 GEPETFLPLDYLEVKPTDEK 20 2 0 Unmodified _GEPETFLPLDYLEVKPTDEK_ 0 0 1 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.0589 3 774.058013 2319.15221 69973.8 0.84221 0.00065192 -0.00039271 -3.0398E-07 0.84182 0.00065161 774.39254200816 779.734935892928 129.38 0.53941 129.38 129.18 129.72 0 143 24 10 0 0 0 1.2749E-06 2 78235 54.658 54.658 1 1.3576 1.1637 0 8386200 4177700 4208500 12596 1739 4796 4919 19657;19658 19658 GEPETFLPLDYLEVKPTDEK 20 2 0 Unmodified _GEPETFLPLDYLEVKPTDEK_ 0 0 1 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 779.4021 3 774.058013 2319.15221 69559.3 1.0264 0.00079446 -0.20843 -0.00016134 0.81793 0.00063312 774.392301379774 779.734795861389 129.24 0.47134 129.24 128.95 129.42 1.5259E-05 134 20 9 0 0 0 2.2338E-07 2 77179 83.063 83.063 1 1.3145 1.1121 0 13510000 5507000 8002600 12597 1739 4796 4919 19659;19660 19659 GEPGGILCFLPGWQEIK 17 1 0 Unmodified _GEPGGILCFLPGWQEIK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 954.9901 2 950.984929 1899.9553 62693.29 0.85932 0.0008172 -1.2591 -0.0011974 -0.39975 -0.00038015 951.486267579158 955.493778277193 132.44 0.4601 132.44 132.16 132.62 0 116 25 7 0 0 0 0.0013371 2 88819 51.218 51.218 1 1.1321 1.1416 0 7724700 2869700 4855000 12598 122 4797 4920 19661;19662 19662 GEQYVVIIQNK 11 1 0 Unmodified _GEQYVVIIQNK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.8561 2 645.856252 1289.69795 75330.59 0.5543 0.000358 0.44171 0.00028528 0.99602 0.00064328 645.856489922606 649.86363654041 80.284 0.51709 80.284 80.093 80.61 0 161 30 7 0 0 0 1.9914E-08 1 42470 122.26 105.42 1 1.2736 1.0521 0 31581000 13812000 17769000 12599 580 4798 4921 19663 19663 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M) _GESDDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHM(103.61)DFDSAVAPR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.2676 3 637.931978 1910.77411 75347.92 0.41296 0.00026344 -0.10512 -6.7059E-05 0.30784 0.00019638 638.266385667839 641.268045493784 67.129 1.1949 67.129 66.636 67.831 0 796 95 12 0 0 0 1.3027E-09 4 38554 103.61 103.56 1 0.86961 1.0292 0 345880000 186730000 159150000 12600 1471 4799 4922 19664;19665;19666;19667 19665 1199 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M) _GESDDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHM(119.92)DFDSAVAPR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.9315 3 637.931978 1910.77411 74909.12 0.33751 0.00021531 -0.15712 -0.00010023 0.1804 0.00011508 637.9320096671 641.268045599992 65.906 1.3316 65.906 65.463 66.795 0 866 112 12 0 0 0 2.1934E-13 4 39219 119.92 119.92 1 0.89717 1.0429 0 377630000 194810000 182810000 12601 1471 4799 4922 19668;19669;19670;19671 19670 1199 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M) _GESDDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHM(44.43)DFDSAVAPR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.3968 2 956.394329 1910.77411 62864.13 0.26017 0.00024882 -0.023892 -2.285E-05 0.23627 0.00022597 956.89567606286 961.899808140086 66.002 0.78036 66.002 65.647 66.427 7.6294E-06 258 65 6 0 0 0 0.00045004 1 38767 44.426 44.426 1 0.8691 0.95686 0 41018000 16196000 24823000 12602 1471 4799 4922 19672 19672 1199 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M) _GESDDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHM(55.59)DFDSAVAPR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.2664 3 637.931978 1910.77411 75502.33 0.42962 0.00027407 -0.097161 -6.1982E-05 0.33246 0.00021209 638.266531692011 641.268015220702 76.879 0.84718 76.879 76.469 77.316 0 414 56 10 0 0 0 3.6216E-05 1 40913 55.589 55.589 1 1.0112 0.83481 0 18952000 9058700 9893400 12603 1471 4799 4922 19673 19673 1199 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M) _GESDDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHM(40.08)DFDSAVAPR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.2684 3 637.931978 1910.77411 76393.45 0.60392 0.00038526 0.10708 6.8311E-05 0.711 0.00045357 638.266353289326 641.268273940418 98.381 0.60265 98.381 98.122 98.725 0 160 36 6 0 0 0 0.00039165 1 55521 40.085 40.067 1 1.5042 1.2647 0 4413200 1923000 2490200 12604 1471 4799 4922 19674 19674 1199 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M) _GESDDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHM(47.57)DFDSAVAPR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.268 3 637.931978 1910.77411 75166.46 0.56102 0.0003579 -0.04217 -2.6902E-05 0.51885 0.00033099 637.931932103016 641.602485420948 77.246 0.85427 77.246 76.862 77.716 0 430 56 10 0 0 0 0.00012219 2 40357 47.568 45.55 1 1.0234 0.85715 0 16591000 7830100 8760800 12605 1471 4799 4922 19675;19676 19676 1199 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M) _GESDDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHM(46.25)DFDSAVAPR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.2671 3 637.931978 1910.77411 76971.9 0.68938 0.00043978 -0.46134 -0.00029431 0.22804 0.00014547 638.26595110752 641.267797352612 98.24 0.56901 98.24 97.994 98.563 0 158 35 6 0 0 0 0.00016969 1 54582 46.249 46.249 1 1.4925 1.3195 0 3882500 1536300 2346200 12606 1471 4799 4922 19677 19677 1199 GESDDFHMDFDSAVAPR 17 0 1 Unmodified _GESDDFHMDFDSAVAPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.8726 3 632.60034 1894.77919 78661.77 0.84082 0.00053191 0.052882 3.3453E-05 0.8937 0.00056536 632.93439943893 636.271267804848 86.312 0.55575 86.312 86.102 86.658 -7.6294E-06 134 41 5 0 0 0 0.047974 1 52002 26.837 26.742 1 0.52855 0.53378 0 15470000 10091000 5379600 12607 1471 4799 4923 19678 19678 GESDDFHMDFDSAVAPR 17 0 1 Unmodified _GESDDFHMDFDSAVAPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.9352 3 632.60034 1894.77919 75300.34 0.56303 0.00035617 -0.0051826 -3.2785E-06 0.55785 0.00035289 632.600499630677 635.936478126451 98.391 0.71475 98.391 98.074 98.789 -7.6294E-06 265 43 10 0 0 0 0.00049453 2 55404 39.657 39.657 1 1.5481 1.3157 0 9140600 3355300 5785300 12608 1471 4799 4923 19679;19680 19680 GESDDFHMDFDSAVAPR 17 0 1 Unmodified _GESDDFHMDFDSAVAPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.6003 3 632.60034 1894.77919 75447.05 0.70327 0.00044489 -0.39946 -0.0002527 0.30381 0.00019219 632.600181115776 635.936260142784 98.237 0.71774 98.237 97.94 98.658 0 275 43 9 0 0 0 0.0039363 2 54518 29.973 29.973 1 1.6106 1.3161 0 9230600 3730700 5499900 12609 1471 4799 4923 19681;19682 19682 GESDGAYIHR 10 0 1 Unmodified _GESDGAYIHR_ 0 0 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.761 2 552.757069 1103.49959 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.333 1 19.333 18.833 19.833 -1.9073E-06 0 0 0 2.8613E-05 1 6025 91.853 54.295 1 12610 1307 4800 4924 19683 19683 GESDGAYIHR 10 0 1 Unmodified _GESDGAYIHR_ 0 0 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.7612 2 552.757069 1103.49959 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.782 1 20.782 20.282 21.282 0 0 0 0 0.046562 1 6097 44.753 29.091 1 12611 1307 4800 4924 19684 19684 GESEFSFEELR 11 0 1 Unmodified _GESEFSFEELR_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.3027 2 665.301507 1328.58846 NaN NaN NaN 0.64791 0.00043105 NaN NaN NaN NaN 87.606 0.44618 87.606 87.347 87.794 0 0 0 0 0.016766 1 53969 54.094 48.874 1 NaN NaN 0 4435000 4435000 0 12612 641 4801 4925 19685 19685 GESEFSFEELR 11 0 1 Unmodified _GESEFSFEELR_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 670.3059 2 665.301507 1328.58846 74941.84 0.42806 0.00028479 -0.11141 -7.4122E-05 0.31665 0.00021067 665.301300816104 670.30539545842 101.15 0.73314 101.15 100.84 101.57 0 175 49 4 0 0 0 0.026688 1 57253 40.589 35.977 1 1.0932 0.94716 0 1999400 851120 1148300 12613 641 4801 4925 19686 19686 GESEFSFEELR 11 0 1 Unmodified _GESEFSFEELR_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.3051 2 665.301507 1328.58846 74945.81 0.47862 0.00031843 0.19243 0.00012802 0.67105 0.00044645 665.30155604485 670.305602787266 101.07 0.79647 101.07 100.72 101.51 0 149 51 4 0 0 0 0.007905 2 56347 51.762 47.15 1 1.1155 1.0069 0 2218800 955910 1262900 12614 641 4801 4925 19687;19688 19687 GESFYQDR 8 0 1 Unmodified _GESFYQDR_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2238 2 501.219788 1000.42502 86897.4 0.30976 0.00015526 0.12828 6.4295E-05 0.43804 0.00021955 501.219843167404 506.22393652842 27.93 0.42276 27.93 27.669 28.092 0 93 28 6 0 0 0 0.033654 1 12950 49.833 34.201 1 1.4727 1.4768 0 16178000 6264700 9912900 12615 1609 4802 4926 19689 19689 GESFYQDR 8 0 1 Unmodified _GESFYQDR_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.224 2 501.219788 1000.42502 87796.35 0.0022184 1.1119E-06 0.26176 0.0001312 0.26398 0.00013231 501.219728576602 506.223987822917 27.386 0.30618 27.386 27.252 27.558 0 52 15 5 0 0 0 0.0065453 2 12748 86.794 53.056 1 2.0429 2.0193 0 15146000 5289700 9856300 12616 1609 4802 4926 19690;19691 19690 GESGQSWPR 9 0 1 Unmodified _GESGQSWPR_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185;B4DDC6 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.2375 2 502.23323 1002.45191 NaN NaN NaN 0.012855 6.4563E-06 NaN NaN NaN NaN 25.548 0.48051 25.548 25.312 25.793 1.9073E-06 0 0 0 0.00017584 1 11054 93.374 87.592 1 NaN NaN 0 59532000 0 59532000 12617 323 4803 4927 19692 19692 GESGQSWPR 9 0 1 Unmodified _GESGQSWPR_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185;B4DDC6 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.2334 2 502.23323 1002.45191 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.541 1 25.541 25.041 26.041 0 0 0 0 0.0026291 1 11128 83.265 54.752 1 12618 323 4803 4927 19693 19693 GESGQSWPR 9 0 1 Unmodified _GESGQSWPR_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185;B4DDC6 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.2377 2 502.23323 1002.45191 NaN NaN NaN -0.18436 -9.2591E-05 NaN NaN NaN NaN 28.285 0.3377 28.285 28.128 28.465 0 0 0 0 0.052787 1 11273 46.129 46.129 1 NaN NaN 0 908420 0 908420 12619 323 4803 4927 19694 19694 GESSLTALER 10 0 1 Unmodified _GESSLTALER_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.7796 2 531.774928 1061.5353 83367.3 0.62317 0.00033139 0.28682 0.00015252 0.90999 0.00048391 532.276475729601 536.779189699315 48.258 0.70426 48.258 47.944 48.648 -3.8147E-06 111 56 5 0 0 0 0.00060252 1 26287 84.213 60.058 1 0.6832 0.71733 0 11143000 4858700 6284700 12620 1233 4804 4928 19695 19695 GESSLTALER 10 0 1 Unmodified _GESSLTALER_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.775 2 531.774928 1061.5353 NaN NaN NaN -0.1245 -6.6206E-05 NaN NaN NaN NaN 48.447 0.63163 48.447 48.053 48.685 0 0 0 0 0.024987 1 26251 53.317 33.53 1 NaN NaN 0 12244000 12244000 0 12621 1233 4804 4928 19696 19696 GESSLTALER 10 0 1 Unmodified _GESSLTALER_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.7758 2 531.774928 1061.5353 NaN NaN NaN 0.25626 0.00013627 NaN NaN NaN NaN 47.221 0.47017 47.221 46.989 47.459 0 0 0 0 0.0017583 1 26079 84.213 54.027 1 NaN NaN 0 18348000 18348000 0 12622 1233 4804 4928 19697 19697 GESSLTALER 10 0 1 Unmodified _GESSLTALER_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 531.7749 2 531.774928 1061.5353 82515.44 0.48311 0.00025691 -0.12264 -6.5219E-05 0.36046 0.00019169 531.774771934976 536.77900972257 55.784 0.72916 55.784 55.428 56.158 0 200 46 6 0 0 0 0.0033685 2 27965 64.841 44.216 1 1.4382 1.237 0 6885900 2776600 4109300 12623 1233 4804 4928 19698;19699 19699 GESSLTALER 10 0 1 Unmodified _GESSLTALER_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.7787 2 531.774928 1061.5353 83260.71 0.4759 0.00025307 -0.1427 -7.5882E-05 0.3332 0.00017719 531.774794340471 536.778955617548 56.159 0.69508 56.159 55.861 56.557 0 199 47 6 0 0 0 0.03101 2 27539 42.395 26.733 1 1.5359 1.2743 0 5745600 2320700 3424900 12624 1233 4804 4928 19700;19701 19700 GETEQDLEADFPSDSFDPLNK 21 1 0 Unmodified _GETEQDLEADFPSDSFDPLNK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1181.5258 2 1177.51897 2353.02338 56945.7 0.24262 0.00028569 -0.73183 -0.00086174 -0.48921 -0.00057605 1178.01927966153 1181.52522316513 123.16 0.41237 123.16 123.02 123.44 0 92 17 7 0 0 0 0.011169 1 73542 23.842 23.842 1 1.8746 1.4808 0 4116700 1260500 2856200 12625 1835 4805 4929 19702 19702 GETLGLIGFGR 11 0 1 Unmodified _GETLGLIGFGR_ 0 0 0 Q5SQP8;P56545 Q5SQP8 Q5SQP8 CTBP2 C-terminal-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.3145 2 560.31148 1118.60841 NaN NaN NaN -0.64041 -0.00035883 NaN NaN NaN NaN 101.77 0.57619 101.77 101.45 102.02 0 0 0 0 0.0022857 1 62507 76.064 56.97 1 NaN NaN 0 2968600 0 2968600 12626 1620 4806 4930 19703 19703 GETVNDCHAEIISR 14 0 1 Unmodified _GETVNDCHAEIISR_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.5878 3 534.250983 1599.73112 83913.18 0.53994 0.00028846 0.46524 0.00024856 1.0052 0.00053702 534.251060411734 537.921629112952 33.662 0.33131 33.662 33.482 33.813 0 101 32 5 0 0 0 2.5279E-05 1 16748 91.441 91.441 1 1.7422 1.8273 0 11037000 4649900 6387400 12627 5 4807 4931 19704 19704 GETVNDCHAEIISR 14 0 1 Unmodified _GETVNDCHAEIISR_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.5875 3 534.250983 1599.73112 82223.95 0.37808 0.00020199 0.12387 6.6178E-05 0.50195 0.00026817 534.251223944075 537.587136876669 38.696 0.2404 38.696 38.531 38.772 0 63 15 5 0 0 0 0.015895 1 17612 21.803 21.803 1 1.1358 0.96241 0 2931300 1132600 1798800 12628 5 4807 4931 19705 19705 GEVAYIDGQVLVPPGYGQDVR 21 0 1 Unmodified _GEVAYIDGQVLVPPGYGQDVR_ 0 0 0 Q53SY7;F8VPD4;P27708;H7BZB3 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1117.0707 2 1116.5684 2231.12225 61501.12 0.10796 0.00012054 0.59309 0.00066223 0.70105 0.00078277 1116.56835165708 1122.07469740747 108.63 0.41876 108.63 108.34 108.76 0 83 26 5 0 0 0 0.0061558 2 69536 24.558 19.844 1 0.90546 0.90641 0 9105400 4933400 4172000 12629 1259 4808 4932 19706;19707 19706 GEVDEEDAALYR 12 0 1 Unmodified _GEVDEEDAALYR_ 0 0 0 Q9NPQ8 Q9NPQ8 Q9NPQ8 RIC8A Synembryn-A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.9059 2 683.809696 1365.60484 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.349 1 52.349 51.849 52.849 3.8147E-06 0 0 0 0.018685 1 29084 52.167 41.796 1 12630 2058 4809 4933 19708 19708 GEVDEEDAALYR 12 0 1 Unmodified _GEVDEEDAALYR_ 0 0 0 Q9NPQ8 Q9NPQ8 Q9NPQ8 RIC8A Synembryn-A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8117 2 683.809696 1365.60484 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.847 1 50.847 50.347 51.347 0 0 0 0 8.0284E-07 1 28748 102.06 86.399 1 12631 2058 4809 4933 19709 19709 GEVDEEDAALYR 12 0 1 Unmodified _GEVDEEDAALYR_ 0 0 0 Q9NPQ8 Q9NPQ8 Q9NPQ8 RIC8A Synembryn-A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8116 2 683.809696 1365.60484 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.881 1 50.881 50.381 51.381 0 0 0 0 5.7676E-07 1 28771 103.7 82.83 1 12632 2058 4809 4933 19710 19710 GEVGLLFTNR 10 0 1 Unmodified _GEVGLLFTNR_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.3084 2 553.303655 1104.59276 NaN NaN NaN 0.074029 4.096E-05 NaN NaN NaN NaN 85.463 0.76466 85.463 85.081 85.846 0 0 0 0 0.0060495 1 51424 67.414 40.412 1 NaN NaN 0 83232000 0 83232000 12633 302 4810 4934 19711 19711 GEVGLLFTNR 10 0 1 Unmodified _GEVGLLFTNR_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.3041 2 553.303655 1104.59276 81882.51 0.52607 0.00029107 0.050088 2.7714E-05 0.57615 0.00031879 553.303744126913 558.30791463947 84.444 0.85183 84.444 84.059 84.911 0 325 68 7 0 0 0 3.2468E-22 1 51801 165.26 121.49 1 1.022 1.1661 0 142490000 66584000 75910000 12634 302 4810 4934 19712 19712 GEVGLLFTNR 10 0 1 Unmodified _GEVGLLFTNR_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.3078 2 553.303655 1104.59276 81616.02 0.61678 0.00034127 0.87858 0.00048612 1.4954 0.00082739 553.303861799477 558.309158054511 97.355 0.93144 97.355 96.858 97.79 0 219 50 7 0 0 0 0.0080272 2 54683 56.632 31.058 1 0.8281 0.6786 0 12771000 6618000 6152600 12635 302 4810 4934 19713;19714 19713 GEVGLLFTNR 10 0 1 Unmodified _GEVGLLFTNR_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.3046 2 553.303655 1104.59276 81753.76 0.39263 0.00021724 0.59819 0.00033098 0.99082 0.00054822 553.303797279176 558.308740340736 97.162 0.85625 97.162 96.726 97.582 0 191 40 7 0 0 0 0.011972 2 53751 51.268 29.182 1 0.89945 0.73119 0 12309000 6198700 6110000 12636 302 4810 4934 19715;19716 19715 GEVITTYCPANNEPIAR 17 0 1 Unmodified _GEVITTYCPANNEPIAR_ 0 0 0 A0A1B0GTY9;A0A140T9V3;A0A1B0GTG2;A0A1B0GW77;P49419;A0A0J9YWF7;A0A1B0GUA1;A0A1B0GW82;F8WDY6;F8VVF2;H0YHM6 A0A1B0GTY9 A0A1B0GTY9 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 957.9666 2 952.962182 1903.90981 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.415 1 73.415 72.915 73.915 0 0 0 0 0.043173 1 43070 38.769 32.07 1 12637 598 4811 4935 19717 19717 GEVITTYCPANNEPIAR 17 0 1 Unmodified _GEVITTYCPANNEPIAR_ 0 0 0 A0A1B0GTY9;A0A140T9V3;A0A1B0GTG2;A0A1B0GW77;P49419;A0A0J9YWF7;A0A1B0GUA1;A0A1B0GW82;F8WDY6;F8VVF2;H0YHM6 A0A1B0GTY9 A0A1B0GTY9 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 957.9669 2 952.962182 1903.90981 NaN NaN NaN 0.38312 0.0003651 NaN NaN NaN NaN 72.277 0.094704 72.277 72.204 72.299 0 0 0 0 0.0046016 2 43367 51.135 45.289 1 NaN NaN 0 6024000 0 6024000 12638 598 4811 4935 19718;19719 19719 GEVLGDVLQLETLK 14 1 0 Unmodified _GEVLGDVLQLETLK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.428 2 757.427239 1512.83992 70186.24 0.82088 0.00062176 0.37142 0.00028133 1.1923 0.00090308 757.427324589389 761.434387356393 118.19 0.57384 118.19 117.91 118.48 0 177 33 8 0 0 0 1.3189E-21 1 75751 148.28 135.78 1 0.81963 0.88635 0 42909000 21384000 21525000 12639 186;1747;718 4812 4936 19720 19720 GEVLGDVLQLETLK 14 1 0 Unmodified _GEVLGDVLQLETLK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.4284 2 757.427239 1512.83992 70293.78 1.0048 0.00076106 0.17682 0.00013393 1.1816 0.00089499 757.427183726789 761.434146973677 117.75 0.45964 117.75 117.53 117.99 7.6294E-06 186 31 8 0 0 0 2.045E-09 3 77211 117.86 108.65 1 0.82066 0.90616 0 44343000 24576000 19767000 12640 186;1747;718 4812 4936 19721;19722;19723 19723 GEVLGDVLQLETLK 14 1 0 Unmodified _GEVLGDVLQLETLK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 761.4351 2 757.427239 1512.83992 69793.3 0.69261 0.0005246 0.33684 0.00025513 1.0294 0.00077973 757.427432966395 761.434552308216 130.53 0.65083 130.53 130.27 130.92 0 199 31 9 0 0 0 2.6004E-05 2 79016 96.745 91.021 1 1.4947 1.216 0 30332000 12190000 18142000 12641 186;1747;718 4812 4936 19724;19725 19725 GEVLGDVLQLETLK 14 1 0 Unmodified _GEVLGDVLQLETLK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.9376 2 757.427239 1512.83992 70270.16 1.0418 0.0007891 0.53365 0.0004042 1.5755 0.0011933 757.427804206606 761.434658371049 130.3 0.61069 130.3 130.09 130.7 0 141 25 8 0 0 0 3.9623E-07 2 77970 111.52 111.52 1 1.7722 1.4551 0 27682000 11301000 16381000 12642 186;1747;718 4812 4936 19726;19727 19726 GEVRPELGSR 10 0 2 Unmodified _GEVRPELGSR_ 0 0 1 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 367.1998 3 367.2 1098.57817 97817.88 0.35939 0.00013197 -0.572 -0.00021004 -0.21261 -7.8069E-05 367.199679328135 373.872008268333 22.318 0.28159 22.318 22.179 22.46 0 50 17 4 0 0 0 0.03085 1 8418 38.96 32.3 1 0.80269 0.88418 0 11778000 6024200 5753800 12643 1259 4813 4937 19728 19728 GEVRPELGSR 10 0 2 Unmodified _GEVRPELGSR_ 0 0 1 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.2968 2 550.296362 1098.57817 80593.8 0.26169 0.00014401 0.64635 0.00035568 0.90803 0.00049969 550.29650069055 560.30499200279 22.096 0.3503 22.096 21.845 22.196 0 52 15 6 0 0 0 0.033624 1 8080 59.067 30.859 1 0.70548 0.79877 0 31299000 17332000 13967000 12644 1259 4813 4937 19729 19729 GEVRPELGSR 10 0 2 Unmodified _GEVRPELGSR_ 0 0 1 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.8719 3 367.2 1098.57817 97845.34 -0.066913 -2.4571E-05 0.0088962 3.2667E-06 -0.058017 -2.1304E-05 367.199935712856 373.872172402708 22.089 0.34808 22.089 21.915 22.263 0 48 15 8 0 0 0 0.0075598 2 8115 48.284 32.655 1 0.64827 0.68929 0 15104000 9615500 5488800 12645 1259 4813 4937 19730;19731 19730 GEVTAADLFNSR 12 0 1 Unmodified _GEVTAADLFNSR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.3214 2 640.317491 1278.62043 75373.49 0.72605 0.00046491 0.53052 0.0003397 1.2566 0.00080461 640.318156752745 645.321589789641 79.101 0.67833 79.101 78.719 79.397 0 260 59 7 0 0 0 1.1073E-05 1 47968 107.55 90.717 1 2.3721 2.5561 0 25960000 7604800 18355000 12646 397;1622 4814 4938 19732 19732 GEVTAADLFNSR 12 0 1 Unmodified _GEVTAADLFNSR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.3224 2 640.317491 1278.62043 78682.19 0.54648 0.00034992 0.096641 6.1881E-05 0.64313 0.0004118 640.317593056195 645.321834982604 91.422 0.46004 91.422 91.229 91.689 -7.6294E-06 109 33 5 0 0 0 0.051889 1 49933 32.329 30.733 1 2.1676 1.892 0 1442800 426880 1015900 12647 397;1622 4814 4938 19733 19733 GEVYPFGIVGMANK 14 1 0 Oxidation (M) _GEVYPFGIVGM(ox)ANK_ GEVYPFGIVGM(1)ANK GEVYPFGIVGM(57.49)ANK 0 1 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93;Q8WU01;Q9UG12 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620;DKFZp566C233 Cold shock domain-containing protein E1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.3817 2 749.373952 1496.73335 NaN NaN NaN -0.38439 -0.00028805 NaN NaN NaN NaN 95.099 0.61249 95.099 94.87 95.482 0 0 0 0 0.0014863 1 57787 57.492 47.183 1 NaN NaN 0 10608000 0 10608000 12648 42 4815 4939 19734 19734 23 GEVYPFGIVGMANK 14 1 0 Oxidation (M) _GEVYPFGIVGM(ox)ANK_ GEVYPFGIVGM(1)ANK GEVYPFGIVGM(68.89)ANK 0 1 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93;Q8WU01;Q9UG12 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620;DKFZp566C233 Cold shock domain-containing protein E1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.3834 2 749.373952 1496.73335 NaN NaN NaN 0.20317 0.00015225 NaN NaN NaN NaN 94.362 0.68475 94.362 93.917 94.602 0 0 0 0 0.0005294 1 58528 68.893 49.65 1 NaN NaN 0 11500000 0 11500000 12649 42 4815 4939 19735 19735 23 GFAAFLTELAER 12 0 1 Unmodified _GFAAFLTELAER_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8538 2 662.848427 1323.6823 73987.18 0.78442 0.00051995 0.28303 0.00018761 1.0675 0.00070756 662.848348949554 667.852426238435 124.49 0.82126 124.49 124.05 124.87 -7.6294E-06 362 56 9 0 0 0 0.00011875 3 80651 107.24 90.013 1 1.2093 1.3087 0 49169000 22089000 27080000 12650 908 4816 4940 19736;19737;19738 19738 GFAAFLTELAER 12 0 1 Unmodified _GFAAFLTELAER_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8534 2 662.848427 1323.6823 73710.41 0.81945 0.00054317 0.50225 0.00033291 1.3217 0.00087609 662.848464999993 667.852604222679 123.94 0.73565 123.94 123.56 124.29 7.6294E-06 309 50 10 0 0 0 1.4464E-05 2 82218 110.14 105.98 1 1.1673 1.3372 0 51094000 23174000 27920000 12651 908 4816 4940 19739;19740 19740 GFAFVEFETK 10 1 0 Unmodified _GFAFVEFETK_ 0 0 0 Q4G0J3;D6RFF0 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.7928 2 587.792589 1173.57063 NaN NaN NaN 1.028 0.00060428 NaN NaN NaN NaN 102.72 0.49721 102.72 102.53 103.03 -7.6294E-06 0 0 0 0.0068167 1 63322 66.621 48.586 1 NaN NaN 0 5452900 5452900 0 12652 1779 4817 4941 19741 19741 GFAFVEFETK 10 1 0 Unmodified _GFAFVEFETK_ 0 0 0 Q4G0J3;D6RFF0 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.7925 2 587.792589 1173.57063 NaN NaN NaN 0.19933 0.00011717 NaN NaN NaN NaN 101.98 0.53731 101.98 101.72 102.26 0 0 0 0 0.0040971 1 64278 73.985 55.949 1 NaN NaN 0 7311300 7311300 0 12653 1779 4817 4941 19742 19742 GFAFVEFETK 10 1 0 Unmodified _GFAFVEFETK_ 0 0 0 Q4G0J3;D6RFF0 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.7928 2 587.792589 1173.57063 81466.34 0.81149 0.00047699 -0.0065634 -3.8579E-06 0.80492 0.00047313 587.792639442718 591.799759434611 114.63 0.38786 114.63 114.48 114.86 0 69 17 6 0 0 0 0.0091807 2 67015 55.064 49.283 1 0.55096 0.4517 0 2432900 1611000 821850 12654 1779 4817 4941 19743;19744 19744 GFAFVEFETK 10 1 0 Unmodified _GFAFVEFETK_ 0 0 0 Q4G0J3;D6RFF0 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 591.8003 2 587.792589 1173.57063 81236.1 0.64524 0.00037927 -0.20568 -0.0001209 0.43956 0.00025837 587.792595631998 591.799630128724 114.48 0.46708 114.48 114.27 114.74 0 68 19 5 0 0 0 0.0088235 2 65977 55.549 52.141 1 0.74024 0.57903 0 2230200 1482600 747630 12655 1779 4817 4941 19745;19746 19746 GFAFVEFSHLQDATR 15 0 1 Unmodified _GFAFVEFSHLQDATR_ 0 0 0 A0A0S2Z4W4;Q7Z3D7;A0A0A0MR66;P98175;Q6PKH5;A0A0S2Z4X1 A0A0S2Z4W4 A0A0S2Z4W4 DKFZp686E2459;RBM10 RNA-binding protein 10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.2892 3 575.617883 1723.83182 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.09 1 103.09 102.59 103.59 7.6294E-06 0 0 0 0.021063 1 63545 50.806 46.176 1 12656 464 4818 4942 19747 19747 GFAFVQYVNER 11 0 1 Unmodified _GFAFVQYVNER_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;B4DMJ1;B4DSU6;G3V4M8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.3333 2 665.332944 1328.65134 74022.96 0.86937 0.00057842 -0.13057 -8.6872E-05 0.7388 0.00049155 665.332801832755 670.336917937438 95.787 1.1787 95.787 95.217 96.396 0 695 97 10 0 0 0 1.1046E-12 2 58145 145.72 136.76 1 1.0908 1.291 0 350690000 168040000 182650000 12657 837;781 4819 4943 19748;19749 19748 GFAFVQYVNER 11 0 1 Unmodified _GFAFVQYVNER_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;B4DMJ1;B4DSU6;G3V4M8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.3334 2 665.332944 1328.65134 74320.58 0.62517 0.00041594 -0.11137 -7.4097E-05 0.5138 0.00034185 665.332886087519 670.336855773532 94.908 0.92149 94.908 94.373 95.294 0 492 78 10 0 0 0 7.5763E-24 2 58935 174.92 167.2 1 1.1051 1.2892 0 505530000 249440000 256090000 12658 837;781 4819 4943 19750;19751 19751 GFAFVQYVNER 11 0 1 Unmodified _GFAFVQYVNER_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;B4DMJ1;B4DSU6;G3V4M8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.3382 2 665.332944 1328.65134 74167.2 0.86969 0.00057864 -0.35996 -0.00023949 0.50974 0.00033914 665.332377422451 670.337151723067 95.151 0.6244 95.151 95.108 95.733 0 245 52 7 0 0 0 0.0026948 1 59499 61.161 57.274 1 1.0075 1.1604 0 219580000 112660000 106920000 12659 837;781 4819 4943 19752 19752 GFAFVQYVNER 11 0 1 Unmodified _GFAFVQYVNER_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;B4DMJ1;B4DSU6;G3V4M8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.3333 2 665.332944 1328.65134 74492.65 0.7317 0.00048682 -0.14523 -9.6625E-05 0.58647 0.0003902 665.33273323437 670.337048780746 108.89 0.96535 108.89 108.58 109.55 0 263 46 9 0 0 0 2.7321E-06 2 62541 111.65 111.65 1 0.61326 0.52919 0 81711000 49216000 32495000 12660 837;781 4819 4943 19753;19754 19753 GFAFVQYVNER 11 0 1 Unmodified _GFAFVQYVNER_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;B4DMJ1;B4DSU6;G3V4M8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.3372 2 665.332944 1328.65134 74641.04 0.6303 0.00041936 -0.012297 -8.1817E-06 0.61801 0.00041118 665.332889680899 670.337034845672 108.73 0.94149 108.73 108.42 109.36 7.6294E-06 288 45 10 0 0 0 9.8957E-09 2 61577 123.86 123.86 1 0.65507 0.57167 0 71527000 45154000 26373000 12661 837;781 4819 4943 19755;19756 19756 GFAFVTFDDHDSVDK 15 1 0 Unmodified _GFAFVTFDDHDSVDK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VTQ5;H0YH80 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.384 2 850.383559 1698.75257 65869.66 0.78369 0.00066644 -0.23001 -0.0001956 0.55368 0.00047084 850.884854018258 854.390301578586 92.727 0.77489 92.727 92.387 93.161 0 239 70 5 0 0 0 0.031593 2 56163 39.179 39.179 1 2.2479 2.2033 0 20938000 6799500 14139000 12662 317 4820 4944 19757;19758 19758 GFAFVTFDDHDSVDK 15 1 0 Unmodified _GFAFVTFDDHDSVDK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VTQ5;H0YH80 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.9293 3 567.258132 1698.75257 83255.81 0.69558 0.00039457 -0.68711 -0.00038977 0.0084704 4.8049E-06 567.591325700778 569.928956631001 92.742 0.83424 92.742 92.396 93.231 7.6294E-06 227 74 5 0 0 0 0.0040735 2 56093 33.842 33.842 1 2.4525 2.4042 0 20772000 4288200 16484000 12663 317 4820 4944 19759;19760 19759 GFAFVTFDDHDSVDK 15 1 0 Unmodified _GFAFVTFDDHDSVDK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VTQ5;H0YH80 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.9294 3 567.258132 1698.75257 80143.49 0.96632 0.00054816 -0.63654 -0.00036108 0.32978 0.00018707 567.257333456549 569.928888144483 91.876 0.74841 91.876 91.519 92.267 7.6294E-06 185 64 5 0 0 0 0.0093308 2 56742 27.263 27.263 1 2.074 2.1992 0 23466000 7320400 16146000 12664 317 4820 4944 19761;19762 19761 GFAFVTFDDHDSVDK 15 1 0 Unmodified _GFAFVTFDDHDSVDK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VTQ5;H0YH80 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 854.3919 2 850.383559 1698.75257 NaN NaN NaN -0.066733 -5.6748E-05 NaN NaN NaN NaN 91.839 0.79449 91.839 91.553 92.347 0 0 0 0 0.01129 1 56743 49.934 35.035 1 NaN NaN 0 18829000 0 18829000 12665 317 4820 4944 19763 19763 GFAFVTFDDHDSVDK 15 1 0 Unmodified _GFAFVTFDDHDSVDK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VTQ5;H0YH80 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 850.3841 2 850.383559 1698.75257 66827.55 0.71578 0.00060868 -0.23241 -0.00019764 0.48337 0.00041105 850.38334007727 854.390416778545 105.36 0.56873 105.36 105.02 105.59 0 168 37 7 0 0 0 0.00041041 2 60063 51.218 51.055 1 1.3773 1.0846 0 5717500 2631300 3086200 12666 317 4820 4944 19764;19765 19765 GFAFVTFDDHDSVDK 15 1 0 Unmodified _GFAFVTFDDHDSVDK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VTQ5;H0YH80 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.8931 2 850.383559 1698.75257 66340.2 0.62036 0.00052754 0.023772 2.0216E-05 0.64413 0.00054776 850.38348492312 854.892133763498 105.09 0.58576 105.09 104.76 105.35 0 158 36 6 0 0 0 0.00052051 2 59038 62.408 57.23 1 1.3713 1.1126 0 4408400 1805800 2602600 12667 317 4820 4944 19766;19767 19766 GFAFVTFDDHDTVDK 15 1 0 Unmodified _GFAFVTFDDHDTVDK_ 0 0 0 P51991;B4E3E6;B4DDB6 P51991 P51991 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.3982 2 857.391384 1712.76822 66571.64 0.86742 0.00074372 -0.28957 -0.00024827 0.57785 0.00049544 857.893213857157 861.397877880704 93.003 0.37849 93.003 92.744 93.123 0 86 31 4 0 0 0 0.0048644 2 57575 38.402 38.402 1 1.304 1.3064 0 13898000 5204500 8693900 12668 1598 4821 4945 19768;19769 19768 GFAFVTFESPADAK 14 1 0 Unmodified _GFAFVTFESPADAK_ 0 0 0 H0Y6E7;H3BT71;P38159;B4E352;Q2VIN3;Q96E39;H3BR27;A0A1B0GUK8;A8K8A6;O75526;Q8N7X1 H0Y6E7 H0Y6E7 RBMX;RBMXL1;RBMXL2;RBMXL3 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.8721 2 743.864274 1485.714 70485.42 1.0665 0.00079332 -0.16278 -0.00012109 0.90371 0.00067224 743.864208067531 747.871335235115 108.38 0.83062 108.38 108.05 108.88 0 413 59 11 0 0 0 3.0373E-14 2 67726 128.17 117.64 1 1.3193 1.5153 0 200470000 84076000 116390000 12669 1284 4822 4946 19770;19771 19771 GFAFVTFESPADAK 14 1 0 Unmodified _GFAFVTFESPADAK_ 0 0 0 H0Y6E7;H3BT71;P38159;B4E352;Q2VIN3;Q96E39;H3BR27;A0A1B0GUK8;A8K8A6;O75526;Q8N7X1 H0Y6E7 H0Y6E7 RBMX;RBMXL1;RBMXL2;RBMXL3 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.8717 2 743.864274 1485.714 70843.99 0.81432 0.00060575 0.043642 3.2464E-05 0.85797 0.00063821 743.864219219444 747.871337729773 107.79 1.087 107.79 107.45 108.54 0 445 77 11 0 0 0 1.798E-37 4 68841 164.64 146.33 1 1.3671 1.5555 0 146700000 63070000 83633000 12670 1284 4822 4946 19772;19773;19774;19775 19773 GFAFVTFESPADAK 14 1 0 Unmodified _GFAFVTFESPADAK_ 0 0 0 H0Y6E7;H3BT71;P38159;B4E352;Q2VIN3;Q96E39;H3BR27;A0A1B0GUK8;A8K8A6;O75526;Q8N7X1 H0Y6E7 H0Y6E7 RBMX;RBMXL1;RBMXL2;RBMXL3 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.8715 2 743.864274 1485.714 70360.13 1.0515 0.00078214 -0.22781 -0.00016946 0.82365 0.00061268 743.86416581494 747.871072039304 119.56 0.84834 119.56 119.27 120.11 0 227 37 8 0 0 0 3.4238E-09 2 70734 112.83 97.262 1 0.79474 0.65361 0 39214000 21484000 17730000 12671 1284 4822 4946 19776;19777 19777 GFAFVTFESPADAK 14 1 0 Unmodified _GFAFVTFESPADAK_ 0 0 0 H0Y6E7;H3BT71;P38159;B4E352;Q2VIN3;Q96E39;H3BR27;A0A1B0GUK8;A8K8A6;O75526;Q8N7X1 H0Y6E7 H0Y6E7 RBMX;RBMXL1;RBMXL2;RBMXL3 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 743.8647 2 743.864274 1485.714 70656.22 0.69114 0.00051411 0.043335 3.2235E-05 0.73447 0.00054635 743.864218996857 747.871254739153 119.4 1.0164 119.4 119.03 120.05 -7.6294E-06 237 43 10 0 0 0 5.0046E-21 3 69679 141.88 126.31 1 0.76301 0.64069 0 49132000 29856000 19276000 12672 1284 4822 4946 19778;19779;19780 19778 GFAFVYFENVDDAK 14 1 0 Unmodified _GFAFVYFENVDDAK_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7BXF3 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.3799 2 811.380288 1620.74602 68386.8 0.90338 0.00073299 0.12534 0.0001017 1.0287 0.00083468 811.380233759989 815.387407517877 114.98 0.74709 114.98 114.66 115.41 7.6294E-06 335 48 11 0 0 0 0.00011625 4 72928 82.489 82.489 1 1.22 1.3783 0 82310000 37217000 45093000 12673 889 4823 4947 19781;19782;19783;19784 19783 GFAFVYFENVDDAK 14 1 0 Unmodified _GFAFVYFENVDDAK_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7BXF3 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.3806 2 811.380288 1620.74602 68071.21 0.75247 0.00061054 -0.054511 -4.4229E-05 0.69796 0.00056631 811.88186025431 815.387277670433 114.46 0.72758 114.46 114.13 114.86 0 343 47 10 0 0 0 2.4473E-06 2 74442 105.46 105.46 1 1.1343 1.2804 0 65304000 29277000 36028000 12674 889 4823 4947 19785;19786 19786 GFAFVYFENVDDAK 14 1 0 Unmodified _GFAFVYFENVDDAK_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7BXF3 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.3799 2 811.380288 1620.74602 68020.01 0.9759 0.00079183 -0.24626 -0.00019981 0.72964 0.00059201 811.380134418062 815.387130544113 126.25 0.98877 126.25 125.84 126.83 7.6294E-06 201 38 8 0 0 0 0.0078906 1 75783 39.625 37.005 1 0.87672 0.69275 0 18115000 9627900 8487100 12675 889 4823 4947 19787 19787 GFAFVYFENVDDAK 14 1 0 Unmodified _GFAFVYFENVDDAK_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7BXF3 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.8842 2 811.380288 1620.74602 68096.31 0.71241 0.00057803 0.018433 1.4956E-05 0.73084 0.00059299 811.380358562806 815.387298231063 126.1 0.95267 126.1 125.74 126.69 0 258 41 11 0 0 0 0.002672 2 74764 48.44 48.44 1 0.85286 0.68502 0 15338000 7955400 7382900 12676 889 4823 4947 19788;19789 19789 GFAFVYFER 9 0 1 Unmodified _GFAFVYFER_ 0 0 0 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.2866 2 568.282192 1134.54983 81350.51 0.82616 0.00046949 -0.1476 -8.3881E-05 0.67856 0.00038561 568.2821231174 573.285984012298 107.87 0.88191 107.87 107.5 108.39 0 260 64 6 0 0 0 0.001665 2 68844 84.498 74.587 1 1.1458 1.2055 0 23144000 10611000 12533000 12677 1716 4824 4948 19790;19791 19790 GFAHGSVYK 9 1 0 Unmodified _GFAHGSVYK_ 0 0 0 Q9H6S8;Q6DKI9;Q9BSR4;B7Z1W6;Q9H9Y6;H7C0D9;Q4QRK8 Q9H6S8 Q9H6S8 POLR1B DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.2528 2 483.245609 964.476666 NaN NaN NaN 0.98829 0.00047759 NaN NaN NaN NaN 20.955 0.22075 20.955 20.829 21.049 0 0 0 0 0.022342 1 7206 57.047 31.153 1 NaN NaN 0 4761900 0 4761900 12678 1085 4825 4949 19792 19792 GFAHGSVYK 9 1 0 Unmodified _GFAHGSVYK_ 0 0 0 Q9H6S8;Q6DKI9;Q9BSR4;B7Z1W6;Q9H9Y6;H7C0D9;Q4QRK8 Q9H6S8 Q9H6S8 POLR1B DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.2463 2 483.245609 964.476666 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.955 1 20.955 20.455 21.455 0 0 0 0 0.030931 1 7187 52.716 27.718 1 12679 1085 4825 4949 19793 19793 GFAYVQFEDVR 11 0 1 Unmodified _GFAYVQFEDVR_ 0 0 0 Q5JRI1;Q53GD7;A0A0S2Z504;O75494;Q8WXF0 Q5JRI1 Q5JRI1 SRSF10;SRSF12 Serine/arginine-rich splicing factor 10;Serine/arginine-rich splicing factor 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.8303 2 665.824952 1329.63535 74193.78 0.78731 0.00052421 0.10577 7.0422E-05 0.89308 0.00059464 665.825148275011 670.829362583456 94.21 0.9482 94.21 93.851 94.799 0 447 86 7 0 0 0 6.783E-10 2 57135 127.3 115.71 1 1.1329 1.2836 0 106350000 55036000 51311000 12680 574 4826 4950 19794;19795 19794 GFAYVQFEDVR 11 0 1 Unmodified _GFAYVQFEDVR_ 0 0 0 Q5JRI1;Q53GD7;A0A0S2Z504;O75494;Q8WXF0 Q5JRI1 Q5JRI1 SRSF10;SRSF12 Serine/arginine-rich splicing factor 10;Serine/arginine-rich splicing factor 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8288 2 665.824952 1329.63535 73933.95 0.63058 0.00041985 0.57164 0.00038061 1.2022 0.00080046 665.825329513491 670.829499169044 93.485 0.80589 93.485 93.085 93.891 -7.6294E-06 394 72 7 0 0 0 6.628E-08 2 57894 114.84 103.35 1 1.1723 1.3512 0 72657000 34741000 37916000 12681 574 4826 4950 19796;19797 19796 GFDALQYQEHLDYEIIQSLNPEFNK 25 1 0 Unmodified _GFDALQYQEHLDYEIIQSLNPEFNK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1007.4926 3 1004.48557 3010.43487 60268.32 0.8178 0.00082146 0.13196 0.00013255 0.94975 0.00095401 1004.8199126945 1007.49144779394 133.17 0.4464 133.17 132.91 133.35 -1.5259E-05 57 15 12 0 0 0 3.288E-46 2 87129 147.11 147.11 1 0.81172 0.91981 0 155590000 86545000 69043000 12682 2023;1687 4827 4951 19798;19799 19799 GFDALQYQEHLDYEIIQSLNPEFNK 25 1 0 Unmodified _GFDALQYQEHLDYEIIQSLNPEFNK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1004.821 3 1004.48557 3010.43487 59472.96 0.59753 0.00060021 0.044431 4.463E-05 0.64196 0.00064484 1004.81978634925 1007.49147910736 133.14 0.35204 133.14 133.05 133.4 0 74 10 14 0 0 0 1.0908E-27 2 89328 114.88 114.88 1 0.87573 1.0203 0 250220000 130660000 119560000 12683 2023;1687 4827 4951 19800;19801 19800 GFDILGIK 8 1 0 Unmodified _GFDILGIK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.7623 2 431.755278 861.496004 NaN NaN NaN 0.087609 3.7826E-05 NaN NaN NaN NaN 104.9 0.7744 104.9 104.48 105.25 0 0 0 0 0.030461 1 64800 58.981 35.009 1 NaN NaN 0 6382000 0 6382000 12684 1609 4828 4952 19802 19802 GFDILGIK 8 1 0 Unmodified _GFDILGIK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 431.7558 2 431.755278 861.496004 NaN NaN NaN 0.06845 2.9554E-05 NaN NaN NaN NaN 104.08 0.65372 104.08 103.75 104.41 0 0 0 0 0.027494 1 65749 60.799 40.244 1 NaN NaN 0 2762200 2762200 0 12685 1609 4828 4952 19803 19803 GFDILGIK 8 1 0 Unmodified _GFDILGIK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.7622 2 431.755278 861.496004 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.04 1 104.04 103.54 104.54 -7.6294E-06 0 0 0 0.045415 1 65865 56.122 32.598 1 12686 1609 4828 4952 19804 19804 GFDPNQLSVATLLFEGDREK 20 1 1 Unmodified _GFDPNQLSVATLLFEGDREK_ 0 0 1 A0A1B0GWA2;B7Z3Q4;O00116;Q53SN7 A0A1B0GWA2 A0A1B0GWA2 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.0544 3 746.04633 2235.11716 71310.91 0.84075 0.00062724 0.78862 0.00058834 1.6294 0.0012156 746.380137994873 752.389332094408 122.12 0.6201 122.12 121.77 122.39 0 114 44 5 0 0 0 0.0015881 1 80821 31.462 31.462 1 2.5507 2.8256 0 8453300 2543800 5909500 12687 635 4829 4953 19805 19805 GFDQEEVFEK 10 1 0 Unmodified _GFDQEEVFEK_ 0 0 0 C9J2Y9;B4DHJ3;P30876;B4DR40;C9J4M6;B4DH29 C9J2Y9 C9J2Y9 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.2866 2 614.280043 1226.54553 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.731 1 62.731 62.231 63.231 0 0 0 0 0.012797 1 36017 56.432 44.206 1 12688 975 4830 4954 19806 19806 GFDQEEVFEK 10 1 0 Unmodified _GFDQEEVFEK_ 0 0 0 C9J2Y9;B4DHJ3;P30876;B4DR40;C9J4M6;B4DH29 C9J2Y9 C9J2Y9 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.2874 2 614.280043 1226.54553 82944.27 0.4284 0.00026316 0.15708 9.6491E-05 0.58548 0.00035965 614.280161298539 618.287239319039 61.587 0.42363 61.587 61.376 61.8 0 88 38 5 0 0 0 0.0029901 1 36079 66.568 66.568 1 1.271 1.2846 0 8612300 4022200 4590100 12689 975 4830 4954 19807 19807 GFDTSSSSSNSAASSSFK 18 1 0 Unmodified _GFDTSSSSSNSAASSSFK_ 0 0 0 A0A024QZW7;P49790 A0A024QZW7 A0A024QZW7 NUP153 Nuclear pore complex protein Nup153 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 881.3887 2 877.379202 1752.74385 NaN NaN NaN 0.052796 4.6322E-05 NaN NaN NaN NaN 38.255 0.24435 38.255 38.125 38.369 0 0 0 0 5.5237E-05 1 19565 66.989 60.955 1 NaN NaN 0 5864100 0 5864100 12690 31 4831 4955 19808 19808 GFDTSSSSSNSAASSSFK 18 1 0 Unmodified _GFDTSSSSSNSAASSSFK_ 0 0 0 A0A024QZW7;P49790 A0A024QZW7 A0A024QZW7 NUP153 Nuclear pore complex protein Nup153 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.8861 2 877.379202 1752.74385 66526.74 0.31705 0.00027818 0.25248 0.00022152 0.56954 0.0004997 877.379236074424 881.888230691733 37.316 0.25671 37.316 37.147 37.404 0 77 21 5 0 0 0 1.1548E-07 2 19310 88.075 82.23 1 1.0446 1.0546 0 8176300 4658900 3517400 12691 31 4831 4955 19809;19810 19810 GFEPTLEALFGK 12 1 0 Unmodified _GFEPTLEALFGK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840;Q7Z7Q0;A8MUN2;E1A689;C0JYY2;P04114;A8K479 CON__ENSEMBL:ENSBTAP00000032840;E1A689 CON__ENSEMBL:ENSBTAP00000032840 APOB Apolipoprotein B-100;Apolipoprotein B-48 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.8452 2 654.845353 1307.67615 NaN NaN NaN 0.13442 8.8027E-05 NaN NaN NaN NaN 121.66 0.4716 121.66 121.38 121.85 7.6294E-06 0 0 0 2.9742E-13 1 78568 123.86 98.937 1 NaN NaN 0 5158000 5158000 0 + 12692 1146;1123 4832 4956 19811 19811 GFEPTLEALFGK 12 1 0 Unmodified _GFEPTLEALFGK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840;Q7Z7Q0;A8MUN2;E1A689;C0JYY2;P04114;A8K479 CON__ENSEMBL:ENSBTAP00000032840;E1A689 CON__ENSEMBL:ENSBTAP00000032840 APOB Apolipoprotein B-100;Apolipoprotein B-48 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.8455 2 654.845353 1307.67615 NaN NaN NaN -1.0403 -0.00068121 NaN NaN NaN NaN 133.87 0.30038 133.87 133.74 134.04 0 0 0 0 0.00065451 1 80707 86.624 54.403 1 NaN NaN 0 2335100 2335100 0 + 12693 1146;1123 4832 4956 19812 19812 GFFDPNTEENLTYLQLK 17 1 0 Unmodified _GFFDPNTEENLTYLQLK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1015.5007 2 1014.99929 2027.98402 NaN NaN NaN -0.084501 -8.5769E-05 NaN NaN NaN NaN 119.29 0.4858 119.29 119.12 119.61 -7.6294E-06 0 0 0 6.7084E-09 2 76693 94.191 88.346 1 NaN NaN 0 7449200 7449200 0 12694 1486 4833 4957 19813;19814 19813 GFFDPNTEENLTYLQLK 17 1 0 Unmodified _GFFDPNTEENLTYLQLK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1015.5014 2 1014.99929 2027.98402 61774.55 0.39836 0.00040434 -0.34603 -0.00035122 0.052336 5.3121E-05 1015.50090671526 1019.00597567868 118.84 0.55035 118.84 118.68 119.23 -7.6294E-06 115 35 6 0 0 0 3.6905E-07 2 78219 96.745 96.745 1 0.44441 0.44363 0 14413000 8256900 6156100 12695 1486 4833 4957 19815;19816 19815 GFFDPNTEENLTYLQLK 17 1 0 Unmodified _GFFDPNTEENLTYLQLK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1015.5003 2 1014.99929 2027.98402 NaN NaN NaN 0.14078 0.00014289 NaN NaN NaN NaN 131.22 0.43037 131.22 131.03 131.46 0 0 0 0 0.035953 1 79608 35.645 30.039 1 NaN NaN 0 2781700 2781700 0 12696 1486 4833 4957 19817 19817 GFFDPNTEENLTYLQLMER 19 0 1 Oxidation (M) _GFFDPNTEENLTYLQLM(ox)ER_ GFFDPNTEENLTYLQLM(1)ER GFFDPNTEENLTYLQLM(45.79)ER 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1167.5417 2 1167.04136 2332.06816 55088.88 0.1979 0.00023096 -0.048799 -5.695E-05 0.1491 0.00017401 1167.54274559896 1172.5472437532 117.62 0.43733 117.62 117.41 117.84 7.6294E-06 162 28 8 0 0 0 0.00010769 2 75273 45.79 45.79 1 2.1546 2.2243 0 20033000 5874700 14159000 12697 1754 4834 4958 19818;19819 19819 1613 GFFDPNTEENLTYLQLMER 19 0 1 Oxidation (M) _GFFDPNTEENLTYLQLM(ox)ER_ GFFDPNTEENLTYLQLM(1)ER GFFDPNTEENLTYLQLM(51.21)ER 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1172.5436 2 1167.04136 2332.06816 55325.55 0.043496 5.0761E-05 -0.19136 -0.00022333 -0.14787 -0.00017257 1167.54365344441 1172.54672502005 117.18 0.39323 117.18 117.02 117.41 0 137 23 8 0 0 0 1.8926E-05 1 76714 51.211 51.211 1 2.3726 2.4491 0 21547000 7032700 14514000 12698 1754 4834 4958 19820 19820 1613 GFFDPNTHENLTYLQLLER 19 0 1 Unmodified _GFFDPNTHENLTYLQLLER_ 0 0 0 A0A075B730;A0A087X1U6;P58107;Q15149;D3DWL0 A0A075B730;P58107;Q15149 Q15149 EPPK1;PLEC;PLEC1 Epiplakin;Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.3889 3 769.718325 2306.13315 68911.97 0.94639 0.00072846 -0.046928 -3.6121E-05 0.89947 0.00069234 770.052567699161 773.388615830736 119.63 0.8502 119.63 119.21 120.06 0 411 57 10 0 0 0 7.2121E-06 2 76734 53.779 53.779 1 1.9063 2.115 0 68112000 24172000 43940000 12699 1754;397;1622 4835 4959 19821;19822 19821 GFFDPNTHENLTYLQLLER 19 0 1 Unmodified _GFFDPNTHENLTYLQLLER_ 0 0 0 A0A075B730;A0A087X1U6;P58107;Q15149;D3DWL0 A0A075B730;P58107;Q15149 Q15149 EPPK1;PLEC;PLEC1 Epiplakin;Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.3899 3 769.718325 2306.13315 69285.48 0.69323 0.00053359 0.17536 0.00013498 0.86859 0.00066857 770.052802034012 773.388885688219 118.92 0.72845 118.92 118.6 119.33 7.6294E-06 353 47 11 0 0 0 1.1003E-64 2 78157 152.18 152.18 1 1.7913 2.0521 0 84025000 29742000 54284000 12700 1754;397;1622 4835 4959 19823;19824 19823 GFFDPNTHENLTYLQLLER 19 0 1 Unmodified _GFFDPNTHENLTYLQLLER_ 0 0 0 A0A075B730;A0A087X1U6;P58107;Q15149;D3DWL0 A0A075B730;P58107;Q15149 Q15149 EPPK1;PLEC;PLEC1 Epiplakin;Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 773.3899 3 769.718325 2306.13315 69160.99 0.70489 0.00054257 0.25431 0.00019575 0.9592 0.00073831 770.052878235399 773.388893064462 131.12 0.53769 131.12 130.9 131.43 0 174 23 11 0 0 0 1.1838E-05 1 79595 59.281 59.281 1 2.2692 1.8918 0 22782000 6760500 16021000 12701 1754;397;1622 4835 4959 19825 19825 GFFDPNTHENLTYLQLLER 19 0 1 Unmodified _GFFDPNTHENLTYLQLLER_ 0 0 0 A0A075B730;A0A087X1U6;P58107;Q15149;D3DWL0 A0A075B730;P58107;Q15149 Q15149 EPPK1;PLEC;PLEC1 Epiplakin;Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 773.3896 3 769.718325 2306.13315 69429.04 1.0965 0.00084398 0.26028 0.00020034 1.3567 0.0010443 770.052946671841 773.38896828384 130.89 0.6004 130.89 130.66 131.26 0 176 27 11 0 0 0 6.8413E-05 1 78527 32.156 32.156 1 2.2067 1.9062 0 22851000 7938900 14912000 12702 1754;397;1622 4835 4959 19826 19826 GFFDPNTHENLTYLQLLQR 19 0 1 Unmodified _GFFDPNTHENLTYLQLLQR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.0629 3 769.39032 2305.14913 67025.18 0.71752 0.00055205 -0.44314 -0.00034094 0.27438 0.00021111 769.724562689196 773.060732617486 116.93 0.62263 116.93 116.64 117.26 7.6294E-06 132 37 6 0 0 0 1.6588E-08 3 76487 89.468 82.108 1 2.7057 2.7201 0 19246000 4516100 14730000 12703 397;1622 4836 4960 19827;19828;19829 19827 GFFDPNTHENLTYR 14 0 1 Unmodified _GFFDPNTHENLTYR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.9343 3 570.933871 1709.77978 80863 0.46805 0.00026723 -0.14986 -8.5562E-05 0.31819 0.00018166 571.268002083352 574.604084651837 74.836 0.83122 74.836 74.5 75.332 0 312 69 6 0 0 0 0.0025163 1 44042 39.143 39.143 1 1.4279 1.469 0 36543000 15564000 20979000 12704 1754 4837 4961 19830 19830 GFFDPNTHENLTYR 14 0 1 Unmodified _GFFDPNTHENLTYR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.2701 3 570.933871 1709.77978 81317.36 0.48408 0.00027638 -0.1772 -0.00010117 0.30688 0.00017521 570.933906196371 574.269872677792 73.41 0.77206 73.41 73.126 73.898 -7.6294E-06 300 64 6 0 0 0 0.00049266 2 43997 52.527 47.472 1 1.5709 1.7689 0 46448000 17618000 28830000 12705 1754 4837 4961 19831;19832 19831 GFFDPNTHENLTYVQLLR 18 0 1 Unmodified _GFFDPNTHENLTYVQLLR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.3672 3 722.032244 2163.0749 70817.15 0.91119 0.00065791 -0.34063 -0.00024595 0.57056 0.00041197 722.366731633439 725.702504123409 113.97 0.77163 113.97 113.65 114.42 0 411 55 10 0 0 0 1.8664E-08 1 72165 73.168 73.168 1 2.1059 2.3287 0 58645000 19497000 39148000 12706 397;1622 4838 4962 19833 19833 GFFDPNTHENLTYVQLLR 18 0 1 Unmodified _GFFDPNTHENLTYVQLLR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.7028 3 722.032244 2163.0749 71305.82 0.70945 0.00051224 -0.10355 -7.4765E-05 0.6059 0.00043748 722.367024513917 725.702549920185 113.25 0.77706 113.25 112.9 113.68 0 321 53 8 0 0 0 6.8868E-17 2 73396 105.28 105.28 1 2.216 2.5512 0 74095000 23101000 50994000 12707 397;1622 4838 4962 19834;19835 19835 GFFEGTIASK 10 1 0 Unmodified _GFFEGTIASK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.7719 2 528.771657 1055.52876 NaN NaN NaN 0.27079 0.00014319 NaN NaN NaN NaN 69.943 0.41296 69.943 69.764 70.177 0 0 0 0 0.0013084 1 41700 86.67 36.544 1 NaN NaN 0 13821000 13821000 0 12708 1607 4839 4963 19836 19836 GFFICDQPYEPVSPYSCK 18 1 0 Unmodified _GFFICDQPYEPVSPYSCK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1101.9945 2 1097.48463 2192.95471 NaN NaN NaN 0.22214 0.0002438 NaN NaN NaN NaN 107.63 0.32103 107.63 107.48 107.81 0 0 0 0 0.01135 1 67024 41.052 35.559 1 NaN NaN 0 4530700 0 4530700 12709 1454 4840 4964 19837 19837 GFGAFER 7 0 1 Unmodified _GFGAFER_ 0 0 0 Q9NY61;A0A087WWS8 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.197 2 392.192845 782.371138 NaN NaN NaN -0.15994 -6.2729E-05 NaN NaN NaN NaN 45.934 0.31228 45.934 45.668 45.98 0 0 0 0 0.045012 1 24702 60.788 24.201 1 NaN NaN 0 21815000 0 21815000 12710 2080 4841 4965 19838 19838 GFGAFER 7 0 1 Unmodified _GFGAFER_ 0 0 0 Q9NY61;A0A087WWS8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.1968 2 392.192845 782.371138 96804.8 0.2241 8.7891E-05 -0.054474 -2.1365E-05 0.16963 6.6527E-05 392.192705742336 397.196821576656 45.249 0.98587 45.249 44.803 45.789 0 356 84 6 0 0 0 0.027742 1 24752 73.039 24.797 1 0.95868 1.096 0 88725000 47897000 40828000 12711 2080 4841 4965 19839 19839 GFGFGLVK 8 1 0 Unmodified _GFGFGLVK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;Q5JSD2;Q5JSD1;A2A3S1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.7437 2 412.736889 823.459225 94260.27 -0.059838 -2.4697E-05 0.23463 9.6839E-05 0.17479 7.2141E-05 412.736851231036 416.743908987916 89.613 1.1629 89.613 89.124 90.287 0 393 98 7 0 0 0 0.013671 4 53863 64.776 64.776 1 2.3345 2.6726 0 188510000 60136000 128380000 12712 28 4842 4966 19840;19841;19842;19843 19840 GFGFGLVK 8 1 0 Unmodified _GFGFGLVK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;Q5JSD2;Q5JSD1;A2A3S1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.7436 2 412.736889 823.459225 94839.46 0.1062 4.3832E-05 0.32497 0.00013413 0.43116 0.00017796 412.736931527534 416.743946712473 88.366 0.86534 88.366 88.002 88.868 0 360 76 8 0 0 0 0.014565 3 54314 62.714 62.714 1 2.3407 2.7358 0 285650000 86122000 199530000 12713 28 4842 4966 19844;19845;19846 19844 GFGFGQGAGALVHSE 15 0 0 Unmodified _GFGFGQGAGALVHSE_ 0 0 0 Q6AI18;E9PP21;Q9BTA4;B4DY28;Q6ZMS3;P21291;Q6AWD1;B3KVC9 Q6AI18 Q6AI18 DKFZp686M148;CSRP1;DKFZp686P2249 Cysteine and glycine-rich protein 1 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.348 2 717.34404 1432.67353 NaN NaN NaN -0.89793 -0.00064412 NaN NaN NaN NaN 88.851 0.21013 88.851 88.782 88.992 0 0 0 0 0.021441 1 54769 42.21 28.441 1 12714 1050 4843 4967 19847 19847 GFGFGQGAGALVHSE 15 0 0 Unmodified _GFGFGQGAGALVHSE_ 0 0 0 Q6AI18;E9PP21;Q9BTA4;B4DY28;Q6ZMS3;P21291;Q6AWD1;B3KVC9 Q6AI18 Q6AI18 DKFZp686M148;CSRP1;DKFZp686P2249 Cysteine and glycine-rich protein 1 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.3443 2 717.34404 1432.67353 NaN NaN NaN 0.39645 0.00028439 NaN NaN NaN NaN 102.59 0.34052 102.59 102.43 102.77 0 0 0 0 0.0097647 1 57330 51.276 46.825 1 12715 1050 4843 4967 19848 19848 GFGFILFK 8 1 0 Unmodified _GFGFILFK_ 0 0 0 D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729 D6R9P3 D6R9P3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.7757 2 464.768189 927.521825 96438.96 0.22846 0.00010618 -0.2774 -0.00012893 -0.048942 -2.2747E-05 464.768102562347 468.775107690027 118.61 0.37648 118.61 118.36 118.74 0 63 22 4 0 0 0 0.033206 1 77931 46.37 29.444 1 1.7522 1.9049 0 3476700 1042100 2434600 12716 1008 4844 4968 19849 19849 GFGFVCFSSPEEATK 15 1 0 Unmodified _GFGFVCFSSPEEATK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;Q4VXU2;H0YB86;B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.8801 2 831.877056 1661.73956 NaN NaN NaN 0.031319 2.6053E-05 NaN NaN NaN NaN 103.85 0.60912 103.85 103.51 104.12 0 0 0 0 0.032318 1 63930 40.154 27.198 1 NaN NaN 0 4095200 4095200 0 12717 273;818 4845 4969 19850 19850 GFGFVCFSSPEEATK 15 1 0 Unmodified _GFGFVCFSSPEEATK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;Q4VXU2;H0YB86;B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.8844 2 831.877056 1661.73956 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.77 1 103.77 103.27 104.27 0 0 0 0 0.0014774 1 64049 71.555 61.323 1 12718 273;818 4845 4969 19851 19851 GFGFVCFSSPEEATK 15 1 0 Unmodified _GFGFVCFSSPEEATK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;Q4VXU2;H0YB86;B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.8853 2 831.877056 1661.73956 69585.77 0.84422 0.00070229 0.10247 8.5243E-05 0.94669 0.00078753 832.37840047954 835.884365529638 103.09 0.61346 103.09 102.79 103.4 7.6294E-06 217 48 7 0 0 0 8.793E-05 4 65171 83.182 79.419 1 2.1348 2.1865 0 17546000 5762000 11784000 12719 273;818 4845 4969 19852;19853;19854;19855 19854 GFGFVCFSSPEEATK 15 1 0 Unmodified _GFGFVCFSSPEEATK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;Q4VXU2;H0YB86;B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.8788 2 831.877056 1661.73956 66756.88 1.0135 0.00084309 0.6701 0.00055744 1.6836 0.0014005 831.877729082938 835.884312561345 115.52 0.67995 115.52 115.1 115.78 0 128 31 7 0 0 0 0.0020864 1 67663 45.915 42.152 1 1.2655 1.0009 0 5093100 1852200 3240900 12720 273;818 4845 4969 19856 19856 GFGFVCFSSPEEATK 15 1 0 Unmodified _GFGFVCFSSPEEATK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;Q4VXU2;H0YB86;B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.8782 2 831.877056 1661.73956 NaN NaN NaN 0.89412 0.0007438 NaN NaN NaN NaN 115.33 0.43594 115.33 115.11 115.55 7.6294E-06 0 0 0 0.01681 1 66606 45.077 38.694 1 NaN NaN 0 2290200 2290200 0 12721 273;818 4845 4969 19857 19857 GFGFVDFLTK 10 1 0 Unmodified _GFGFVDFLTK_ 0 0 0 Q9Y4C8;A0A024RBL4;H0YIL2 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.8053 2 565.797675 1129.5808 82581.62 1.0086 0.00057067 -0.39701 -0.00022463 0.6116 0.00034604 565.797421818169 569.804413138445 121.87 0.48009 121.87 121.59 122.07 0 110 31 5 0 0 0 0.0033968 1 78712 64.711 61.573 1 0.89102 0.89265 0 9829500 4787800 5041700 12722 2145 4846 4970 19858 19858 GFGFVDFLTK 10 1 0 Unmodified _GFGFVDFLTK_ 0 0 0 Q9Y4C8;A0A024RBL4;H0YIL2 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.8053 2 565.797675 1129.5808 81819.72 1.1454 0.00064806 -0.45404 -0.00025689 0.69135 0.00039116 565.797380194935 569.804488783205 121.28 0.50608 121.28 121.07 121.57 0 103 34 4 0 0 0 0.0011505 2 80221 75.378 70.438 1 0.98232 0.97588 0 6141900 2801800 3340100 12723 2145 4846 4970 19859;19860 19859 GFGFVDFLTK 10 1 0 Unmodified _GFGFVDFLTK_ 0 0 0 Q9Y4C8;A0A024RBL4;H0YIL2 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.7973 2 565.797675 1129.5808 82807.64 0.87795 0.00049674 0.17229 9.7483E-05 1.0502 0.00059423 565.797697242772 569.804644852584 133.92 0.30119 133.92 133.74 134.04 0 39 11 6 0 0 0 0.024135 2 81626 45.161 43.463 1 1.131 0.9775 0 1089700 443960 645770 12724 2145 4846 4970 19861;19862 19862 GFGFVDFNSEEDAK 14 1 0 Unmodified _GFGFVDFNSEEDAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.352 2 781.343903 1560.67325 69016.63 0.91203 0.00071261 0.056335 4.4017E-05 0.96836 0.00075662 781.343911433856 785.351040488196 98.691 1.2361 98.691 98.176 99.412 -7.6294E-06 705 101 11 0 0 0 1.812E-29 4 60147 152.07 152.07 1 1.1079 1.3055 0 327880000 160360000 167510000 12725 151 4847 4971 19863;19864;19865;19866 19864 GFGFVDFNSEEDAK 14 1 0 Unmodified _GFGFVDFNSEEDAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.3445 2 781.343903 1560.67325 69376.39 0.70768 0.00055294 0.10105 7.8952E-05 0.80872 0.00063189 781.343969716973 785.351091297232 98.02 1.2664 98.02 97.458 98.724 0 718 105 10 0 0 0 2.2226E-21 3 61041 146.71 137.76 1 1.0924 1.2819 0 336750000 160190000 176560000 12726 151 4847 4971 19867;19868;19869 19867 GFGFVDFNSEEDAK 14 1 0 Unmodified _GFGFVDFNSEEDAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 785.3517 2 781.343903 1560.67325 69430.24 0.89063 0.00069589 -0.14006 -0.00010943 0.75057 0.00058645 781.343717520205 785.350932568236 111.07 0.91484 111.07 110.77 111.68 0 247 41 10 0 0 0 4.0953E-05 2 64277 94.465 93.56 1 0.60683 0.49944 0 39875000 25493000 14381000 12727 151 4847 4971 19870;19871 19871 GFGFVDFNSEEDAK 14 1 0 Unmodified _GFGFVDFNSEEDAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 781.8455 2 781.343903 1560.67325 69423.8 0.69448 0.00054263 -0.043733 -3.417E-05 0.65075 0.00050846 781.343838667712 785.351042196199 111.03 0.86011 111.03 110.69 111.55 0 295 42 10 0 0 0 0.00021373 2 63199 67.385 63.853 1 0.59369 0.49304 0 36871000 22761000 14111000 12728 151 4847 4971 19872;19873 19873 GFGFVLFK 8 1 0 Unmodified _GFGFVLFK_ 0 0 0 D6RF44;H0YA96;D6RAF8;H0Y8G5;Q12771;B4DTC3;A0A024RDF4;A0A024RDB4;A0A024RDF3;Q14103;D6RBQ9;B4DTA2;A0A087WUK2;A0A024RDF6;O14979 D6RF44;B4DTA2 B4DTA2 HNRNPD;HNRPD;HNRNPDL;HNRPDL Heterogeneous nuclear ribonucleoprotein D0;Heterogeneous nuclear ribonucleoprotein D-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.7681 2 457.760364 913.506175 91727.23 0.30919 0.00014154 0.10763 4.9269E-05 0.41682 0.00019081 457.760344684421 461.767355378787 115.18 0.78535 115.18 114.85 115.64 0 174 50 5 0 0 0 0.042803 1 73107 46.37 41.972 1 2.5213 2.6337 0 11863000 2842200 9020400 12729 383;385 4848 4972 19874 19874 GFGFVQFK 8 1 0 Unmodified _GFGFVQFK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;C9JE21 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.2491 2 465.247621 928.480688 88192.63 0.57164 0.00026595 0.34213 0.00015917 0.91376 0.00042513 465.247620354288 469.254791243496 93.358 0.86204 93.358 92.917 93.779 0 310 73 6 0 0 0 0.012692 2 56352 67.035 67.035 1 0.96967 1.072 0 57349000 31308000 26041000 12730 214 4849 4973 19875;19876 19875 GFGFVSFER 9 0 1 Unmodified _GFGFVSFER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YAP2;A8K8J2 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.262 2 523.258717 1044.50288 85773.01 0.69052 0.00036132 -0.011089 -5.8026E-06 0.67943 0.00035552 523.258753404488 528.262725985938 96.621 0.88124 96.621 96.275 97.157 0 295 76 6 0 0 0 0.011387 1 58729 58.426 48.955 1 1.9546 1.9994 0 35518000 11151000 24368000 12731 273 4850 4974 19877 19877 GFGFVSFER 9 0 1 Unmodified _GFGFVSFER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YAP2;A8K8J2 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2588 2 523.258717 1044.50288 85345.47 0.78524 0.00041088 -0.2907 -0.00015211 0.49454 0.00025877 523.258499862458 528.262616799889 95.902 0.89476 95.902 95.373 96.267 0 302 73 6 0 0 0 0.013178 2 59822 56.81 47.947 1 1.9646 2.1496 0 33784000 11868000 21916000 12732 273 4850 4974 19878;19879 19879 GFGFVTFDDHDPVDK 15 1 0 Unmodified _GFGFVTFDDHDPVDK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.9261 3 565.926493 1694.75765 80849.31 0.72725 0.00041157 -0.1762 -9.9714E-05 0.55106 0.00031186 565.926137570173 568.597828054127 95.273 1.0605 95.273 94.896 95.957 7.6294E-06 381 85 8 0 0 0 0.0010629 2 58058 37.177 37.177 1 2.2902 2.4702 0 37437000 10579000 26858000 12733 1508 4851 4975 19880;19881 19881 GFGFVTFDDHDPVDK 15 1 0 Unmodified _GFGFVTFDDHDPVDK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.3942 2 848.386102 1694.75765 NaN NaN NaN 0.022589 1.9164E-05 NaN NaN NaN NaN 95.423 0.67935 95.423 95.03 95.709 0 0 0 0 0.00022506 1 57796 77.124 71.152 1 NaN NaN 0 9003100 0 9003100 12734 1508 4851 4975 19882 19882 GFGFVTFDDHDPVDK 15 1 0 Unmodified _GFGFVTFDDHDPVDK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.5978 3 565.926493 1694.75765 80787.38 0.91901 0.00052009 -0.15226 -8.6169E-05 0.76675 0.00043392 566.260718565026 568.932160115292 94.311 0.95345 94.311 93.95 94.903 0 416 80 8 0 0 0 0.00018494 1 58496 48.131 48.131 1 2.3052 2.6013 0 64208000 19697000 44511000 12735 1508 4851 4975 19883 19883 GFGFVTFDDHDPVDK 15 1 0 Unmodified _GFGFVTFDDHDPVDK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.3939 2 848.386102 1694.75765 NaN NaN NaN 0.12795 0.00010855 NaN NaN NaN NaN 94.308 0.54404 94.308 94.073 94.617 0 0 0 0 0.014137 1 58477 47.429 41.326 1 NaN NaN 0 14824000 0 14824000 12736 1508 4851 4975 19884 19884 GFGFVTFDDHDPVDK 15 1 0 Unmodified _GFGFVTFDDHDPVDK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.5987 3 565.926493 1694.75765 80681.05 0.72317 0.00040926 -0.082617 -4.6755E-05 0.64055 0.0003625 566.260823599108 568.932204192546 107.69 0.58823 107.69 107.48 108.07 0 180 32 9 0 0 0 0.028833 1 61671 22.857 22.857 1 1.3894 1.1096 0 9198700 3723300 5475300 12737 1508 4851 4975 19885 19885 GFGFVTFDDHDPVDK 15 1 0 Unmodified _GFGFVTFDDHDPVDK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.3857 2 848.386102 1694.75765 64920.91 0.81093 0.00068798 -0.24097 -0.00020443 0.56996 0.00048355 848.385705965133 852.894859824557 107.72 0.48994 107.72 107.45 107.94 0 101 27 6 0 0 0 0.027668 1 61713 28.283 27.971 1 1.1748 0.93065 0 4900500 2099400 2801100 12738 1508 4851 4975 19886 19886 GFGFVTFDDHDPVDK 15 1 0 Unmodified _GFGFVTFDDHDPVDK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 852.894 2 848.386102 1694.75765 65658.05 0.65244 0.00055352 0.43573 0.00036967 1.0882 0.00092319 848.386812186872 852.393096310837 107.59 0.6234 107.59 107.37 107.99 0 124 36 5 0 0 0 0.0021395 1 60690 45.764 39.793 1 1.2833 1.0422 0 4449000 2226900 2222000 12739 1508 4851 4975 19887 19887 GFGFVTFDDHDPVDK 15 1 0 Unmodified _GFGFVTFDDHDPVDK_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.2609 3 565.926493 1694.75765 81618.63 0.55794 0.00031575 0.12844 7.2689E-05 0.68638 0.00038844 566.260889368352 568.59803045382 107.62 0.72668 107.62 107.32 108.04 7.6294E-06 246 43 8 0 0 0 0.018602 1 60840 17.917 17.917 1 1.5293 1.2462 0 7541400 3234000 4307400 12740 1508 4851 4975 19888 19888 GFGFVTYATVEEVDAAMNAR 20 0 1 Oxidation (M) _GFGFVTYATVEEVDAAM(ox)NAR_ GFGFVTYATVEEVDAAM(1)NAR GFGFVTYATVEEVDAAM(71.88)NAR 0 1 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;F8VYN5;B4DP35;F8W646;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1087.5062 2 1082.50441 2162.99427 58042.79 0.12298 0.00013312 -0.44185 -0.0004783 -0.31887 -0.00034518 1083.00677513651 1087.50763314649 115.4 0.78883 115.4 115.05 115.84 -7.6294E-06 210 53 7 0 0 0 8.6191E-07 1 73272 71.879 71.879 1 2.8111 2.8293 0 15804000 3341500 12463000 12741 317 4852 4976 19889 19889 240 GFGFVTYATVEEVDAAMNAR 20 0 1 Oxidation (M) _GFGFVTYATVEEVDAAM(ox)NAR_ GFGFVTYATVEEVDAAM(1)NAR GFGFVTYATVEEVDAAM(109.44)NAR 0 1 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;F8VYN5;B4DP35;F8W646;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1088.0082 2 1082.50441 2162.99427 59097.96 0.37023 0.00040077 0.0089702 9.7103E-06 0.3792 0.00041048 1083.00770895688 1087.50820664181 114.8 0.55458 114.8 114.53 115.08 0 165 34 7 0 0 0 1.6481E-13 2 74666 109.44 104.73 1 2.9814 3.0549 0 21002000 5350000 15652000 12742 317 4852 4976 19890;19891 19890 240 GFGFVYFQNHDAADK 15 1 0 Unmodified _GFGFVYFQNHDAADK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.5995 3 572.5986 1714.77397 81452 0.78333 0.00044853 -0.13156 -7.5333E-05 0.65177 0.0003732 572.59841504395 575.604221699571 85.06 0.82693 85.06 84.67 85.497 0 259 67 5 0 0 0 0.001196 1 50958 40.801 40.801 1 1.2131 1.262 0 29641000 13608000 16033000 12743 1706 4853 4977 19892 19892 GFGFVYFQNHDAADK 15 1 0 Unmodified _GFGFVYFQNHDAADK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.9331 3 572.5986 1714.77397 81617.45 0.91863 0.000526 0.0012244 7.0109E-07 0.91985 0.00052671 572.598521850801 575.270197105592 83.631 0.80229 83.631 83.225 84.027 7.6294E-06 307 64 7 0 0 0 0.004309 1 51217 33.547 32.319 1 1.2299 1.2394 0 27012000 14144000 12868000 12744 1706 4853 4977 19893 19893 GFGFVYFQNHDAADK 15 1 0 Unmodified _GFGFVYFQNHDAADK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.7322 2 858.394261 1714.77397 67235.07 0.87904 0.00075457 -0.11422 -9.8045E-05 0.76483 0.00065652 858.895578807808 862.401176630917 83.646 0.80156 83.646 83.091 83.892 -7.6294E-06 106 62 4 0 0 0 0.028025 1 51140 43.897 43.897 1 1.3081 1.3154 0 13576000 6417400 7158200 12745 1706 4853 4977 19894 19894 GFGFVYFQNHDAADK 15 1 0 Unmodified _GFGFVYFQNHDAADK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.5986 3 572.5986 1714.77397 82837.64 0.75707 0.0004335 -0.21328 -0.00012212 0.54379 0.00031138 572.93276201244 575.269953925038 96.615 0.49393 96.615 96.324 96.818 0 128 29 7 0 0 0 0.0094218 1 54216 27.149 27.149 1 0.85555 0.67501 0 5419300 2893700 2525600 12746 1706 4853 4977 19895 19895 GFGFVYFQNHDAADK 15 1 0 Unmodified _GFGFVYFQNHDAADK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.5983 3 572.5986 1714.77397 81898.88 0.32377 0.00018539 -0.099779 -5.7133E-05 0.22399 0.00012826 572.598577994127 575.604296835436 96.393 0.38432 96.393 96.187 96.571 0 112 22 7 0 0 0 0.020578 1 53241 22.475 22.475 1 0.84785 0.67675 0 4112100 2187300 1924800 12747 1706 4853 4977 19896 19896 GFGFWPAK 8 1 0 Unmodified _GFGFWPAK_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.2419 2 455.234513 908.454474 NaN NaN NaN -0.11698 -5.3255E-05 NaN NaN NaN NaN 93.014 0.53954 93.014 92.653 93.192 7.6294E-06 0 0 0 0.017314 1 57754 67.035 60.648 1 NaN NaN 0 5556800 0 5556800 12748 1758 4854 4978 19897 19897 GFGGITHGPPEK 12 1 0 Unmodified _GFGGITHGPPEK_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.8069 2 598.806562 1195.59857 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.902 1 31.902 31.402 32.402 0 0 0 0 0.00084339 1 15765 75.229 51.257 1 12749 965 4855 4979 19898 19898 GFGGITHGPPEK 12 1 0 Unmodified _GFGGITHGPPEK_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.8061 2 598.806562 1195.59857 NaN NaN NaN -0.27509 -0.00016473 NaN NaN NaN NaN 30.885 0.24625 30.885 30.731 30.977 1.9073E-06 0 0 0 2.9573E-08 1 15203 109.83 94.188 1 NaN NaN 0 4856100 4856100 0 12750 965 4855 4979 19899 19899 GFGIGELVWGK 11 1 0 Unmodified _GFGIGELVWGK_ 0 0 0 Q9Y6K1;F8WE91;Q59HC6;A0A0C4DG02 Q9Y6K1 Q9Y6K1 DNMT3A DNA (cytosine-5)-methyltransferase 3A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.3183 2 581.816399 1161.61824 82619.8 0.98781 0.00057473 -0.78381 -0.00045603 0.204 0.00011869 582.317398317562 586.324743070842 115.83 0.3611 115.83 115.65 116.01 0 68 23 5 0 0 0 0.02784 2 73768 40.002 40.002 1 0.76582 0.78363 0 4338100 2425300 1912800 12751 2153 4856 4980 19900;19901 19901 GFGIGELVWGK 11 1 0 Unmodified _GFGIGELVWGK_ 0 0 0 Q9Y6K1;F8WE91;Q59HC6;A0A0C4DG02 Q9Y6K1 Q9Y6K1 DNMT3A DNA (cytosine-5)-methyltransferase 3A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.824 2 581.816399 1161.61824 NaN NaN NaN -0.44122 -0.00025671 NaN NaN NaN NaN 115.16 0.3862 115.16 114.95 115.33 7.6294E-06 0 0 0 0.0031211 1 75056 68.016 59.484 1 NaN NaN 0 1524600 0 1524600 12752 2153 4856 4980 19902 19902 GFGLEGVPEK 10 1 0 Unmodified _GFGLEGVPEK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.7791 2 516.771657 1031.52876 86696.2 0.29018 0.00014996 -0.53328 -0.00027559 -0.2431 -0.00012563 516.771646964886 521.279321067768 67.547 0.58032 67.547 67.293 67.873 0 153 47 4 0 0 0 0.0055366 1 40029 60.019 51.106 1 0.84595 0.86049 0 16863000 8341900 8521300 12753 2100 4857 4981 19903 19903 GFGLEGVPEK 10 1 0 Unmodified _GFGLEGVPEK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.7786 2 516.771657 1031.52876 NaN NaN NaN 0.093551 4.8345E-05 NaN NaN NaN NaN 78.86 0.58153 78.86 78.55 79.132 0 0 0 0 0.042278 1 41578 48.794 35.215 1 NaN NaN 0 982320 0 982320 12754 2100 4857 4981 19904 19904 GFGYVTFSMLEDVQR 15 0 1 Oxidation (M) _GFGYVTFSM(ox)LEDVQR_ GFGYVTFSM(1)LEDVQR GFGYVTFSM(42.47)LEDVQR 0 1 0 A0A024R753;Q9NW13;C9JE21;C9JAA9;A0A0S2Z5E5 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.4214 2 882.916712 1763.81887 NaN NaN NaN -0.052908 -4.6713E-05 NaN NaN NaN NaN 110.38 0.36757 110.38 110.14 110.5 7.6294E-06 0 0 0 0.006242 1 69242 42.475 26.936 1 NaN NaN 0 6129700 0 6129700 12755 214 4858 4982 19905 19905 162 GFHQVPFAPIVFIER 15 0 1 Unmodified _GFHQVPFAPIVFIER_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A0U1RRC8;A0A0U1RQX5 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.9907 3 586.32263 1755.94606 81432.84 0.90921 0.00053309 -0.42365 -0.00024839 0.48557 0.0002847 586.657125649081 589.992945986627 119.4 0.93938 119.4 118.96 119.9 0 275 61 8 0 0 0 0.0016719 3 76812 36.638 36.638 1 1.2599 1.261 0 7990800 3068800 4922000 12756 1575 4859 4983 19906;19907;19908 19908 GFHQVPFAPIVFIER 15 0 1 Unmodified _GFHQVPFAPIVFIER_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A0U1RRC8;A0A0U1RQX5 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.6591 3 586.32263 1755.94606 80341.73 0.64457 0.00037793 0.069264 4.0611E-05 0.71384 0.00041854 586.322509725992 589.65871183408 118.22 0.86897 118.22 117.88 118.75 -7.6294E-06 233 54 6 0 0 0 0.0015476 2 77494 37.555 37.555 1 1.4615 1.4414 0 12954000 4413100 8541100 12757 1575 4859 4983 19909;19910 19909 GFHQVPFAPIVFIER 15 0 1 Unmodified _GFHQVPFAPIVFIER_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A0U1RRC8;A0A0U1RQX5 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.6577 3 586.32263 1755.94606 79588.28 0.65884 0.00038629 0.217 0.00012723 0.87584 0.00051353 586.657135663094 589.993002849394 129.61 0.46268 129.61 129.41 129.88 0 101 20 7 0 0 0 0.011657 1 78406 20.709 20.709 1 0.65057 0.5437 0 3437300 2102500 1334800 12758 1575 4859 4983 19911 19911 GFHQVPFAPIVFIER 15 0 1 Unmodified _GFHQVPFAPIVFIER_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A0U1RRC8;A0A0U1RQX5 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.657 3 586.32263 1755.94606 80820.62 0.86927 0.00050967 -0.14715 -8.6278E-05 0.72212 0.0004234 586.322551204666 589.658676506675 129.38 0.52995 129.38 129.14 129.67 0 87 23 5 0 0 0 0.020075 2 77334 16.579 16.579 1 0.58923 0.50976 0 4350500 2965100 1385400 12759 1575 4859 4983 19912;19913 19912 GFIAGIDLK 9 1 0 Unmodified _GFIAGIDLK_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2809 2 467.273835 932.533118 NaN NaN NaN 0.23114 0.000108 NaN NaN NaN NaN 94.308 0.8326 94.308 93.904 94.736 0 0 0 0 0.038893 1 58523 50.607 27.587 1 NaN NaN 0 9254700 0 9254700 12760 63 4860 4984 19914 19914 GFIAGIDLK 9 1 0 Unmodified _GFIAGIDLK_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2735 2 467.273835 932.533118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.137 1 94.137 93.637 94.637 0 0 0 0 0.052771 1 58490 45.68 16.342 1 12761 63 4860 4984 19915 19915 GFIAGIDLK 9 1 0 Unmodified _GFIAGIDLK_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2798 2 467.273835 932.533118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.149 1 94.149 93.649 94.649 0 0 0 0 0.030931 1 58499 52.716 17.611 1 12762 63 4860 4984 19916 19916 GFINMQSVAK 10 1 0 Oxidation (M) _GFINM(ox)QSVAK_ GFINM(1)QSVAK GFINM(56.26)QSVAK 0 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.7924 2 555.784241 1109.55393 84572.13 0.87158 0.00048441 -0.0028089 -1.5612E-06 0.86877 0.00048285 555.783979180476 559.791279190696 41.622 0.42999 41.622 41.435 41.865 3.8147E-06 92 35 4 0 0 0 0.0040223 1 21927 56.258 36.472 1 1.3755 1.3895 0 10098000 4245100 5852700 12763 2002 4861 4985 19917 19917 1841 GFLNSSELSGLPAGPDR 17 0 1 Unmodified _GFLNSSELSGLPAGPDR_ 0 0 0 E5KS95;P43897;B4DHY8;C9JG32;C9JT21;F8VPA7;F8VS27 E5KS95 E5KS95 TSFM Elongation factor Ts, mitochondrial;Elongation factor Ts MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.9351 2 858.931208 1715.84786 65529.39 1.1333 0.00097341 -0.37567 -0.00032268 0.7576 0.00065073 858.931489584162 863.935283000932 102.09 0.8278 102.09 101.63 102.46 0 327 66 7 0 0 0 7.4404E-05 2 62669 66.393 66.393 1 0.97248 1.0387 0 44605000 18386000 26219000 12764 1208 4862 4986 19918;19919 19918 GFLNSSELSGLPAGPDR 17 0 1 Unmodified _GFLNSSELSGLPAGPDR_ 0 0 0 E5KS95;P43897;B4DHY8;C9JG32;C9JT21;F8VPA7;F8VS27 E5KS95 E5KS95 TSFM Elongation factor Ts, mitochondrial;Elongation factor Ts MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 863.9366 2 858.931208 1715.84786 65156.89 0.78375 0.00067318 -0.26142 -0.00022454 0.52233 0.00044864 858.931138192887 863.935230501256 101.49 0.80849 101.49 101.04 101.85 -7.6294E-06 320 64 6 0 0 0 3.1553E-18 1 63724 133.32 133.32 1 1.2141 1.3273 0 35790000 15447000 20343000 12765 1208 4862 4986 19920 19920 GFLNSSELSGLPAGPDR 17 0 1 Unmodified _GFLNSSELSGLPAGPDR_ 0 0 0 E5KS95;P43897;B4DHY8;C9JG32;C9JT21;F8VPA7;F8VS27 E5KS95 E5KS95 TSFM Elongation factor Ts, mitochondrial;Elongation factor Ts MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 863.9359 2 858.931208 1715.84786 66090.23 0.99872 0.00085783 -0.4061 -0.00034881 0.59263 0.00050902 859.432663911935 864.436115429705 114.11 0.5237 114.11 113.81 114.33 -7.6294E-06 102 22 7 0 0 0 7.7481E-05 2 66575 63.76 63.76 1 1.1229 0.9665 0 7243600 3169400 4074200 12766 1208 4862 4986 19921;19922 19921 GFLNSSELSGLPAGPDR 17 0 1 Unmodified _GFLNSSELSGLPAGPDR_ 0 0 0 E5KS95;P43897;B4DHY8;C9JG32;C9JT21;F8VPA7;F8VS27 E5KS95 E5KS95 TSFM Elongation factor Ts, mitochondrial;Elongation factor Ts MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 863.936 2 858.931208 1715.84786 65346.95 0.61646 0.0005295 0.27972 0.00024026 0.89618 0.00076975 859.433347194709 863.935410980072 114.01 0.573 114.01 113.72 114.3 0 99 24 6 0 0 0 0.0012287 2 65580 42.317 42.317 1 1.272 1.0599 0 6335700 2590300 3745400 12767 1208 4862 4986 19923;19924 19924 GFLPETK 7 1 0 Unmodified _GFLPETK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2265 2 396.218529 790.422505 94194.55 0.60202 0.00023853 0.18866 7.4751E-05 0.79068 0.00031328 396.218542193896 400.225518567351 49.921 1.2155 49.921 49.319 50.534 0 459 105 8 0 0 0 0.026865 1 27814 74.439 45.91 1 0.9922 1.1695 0 634060000 341700000 292360000 12768 1997 4863 4987 19925 19925 GFLSGLLDNVK 11 1 0 Unmodified _GFLSGLLDNVK_ 0 0 0 M0QXU7;Q9UPE4;Q53G69;O43615;M0R301;M0R124 M0QXU7 M0QXU7 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.8278 2 581.826963 1161.63937 NaN NaN NaN -0.36309 -0.00021126 NaN NaN NaN NaN 115.96 0.21635 115.96 115.9 116.12 0 0 0 0 0.0027646 1 73929 71.451 58.863 1 NaN NaN 0 1129400 1129400 0 12769 1351 4864 4988 19926 19926 GFLSGLLDNVK 11 1 0 Unmodified _GFLSGLLDNVK_ 0 0 0 M0QXU7;Q9UPE4;Q53G69;O43615;M0R301;M0R124 M0QXU7 M0QXU7 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.835 2 581.826963 1161.63937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.91 1 115.91 115.41 116.41 0 0 0 0 0.0068943 1 73890 62.823 46.047 1 12770 1351 4864 4988 19927 19927 GFLSGLLDNVK 11 1 0 Unmodified _GFLSGLLDNVK_ 0 0 0 M0QXU7;Q9UPE4;Q53G69;O43615;M0R301;M0R124 M0QXU7 M0QXU7 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.8342 2 581.826963 1161.63937 NaN NaN NaN 0.532 0.00030953 NaN NaN NaN NaN 115.39 0.36754 115.39 115.15 115.52 0 0 0 0 0.0029122 1 75193 70.028 54.366 1 NaN NaN 0 4112400 0 4112400 12771 1351 4864 4988 19928 19928 GFLTERDDILCPDCGK 16 1 1 Unmodified _GFLTERDDILCPDCGK_ 0 0 1 I0CE67;Q6I9R8;Q2XQU9;J3KNW4;A0A0A0MSG2;Q14192;Q53T40 I0CE67 I0CE67 FHL2 Four and a half LIM domains protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.6337 3 632.625721 1894.85533 77945.76 0.68524 0.0004335 0.14529 9.1912E-05 0.83052 0.00052541 632.625649220384 638.633406357636 81.902 0.64405 81.902 81.653 82.297 0 151 56 4 0 0 0 0.00039995 1 50030 47.64 47.64 1 1.9515 2.2492 0 28545000 7611600 20934000 12772 478 4865 4989 19929 19929 GFNEGLWEIDNNPK 14 1 0 Unmodified _GFNEGLWEIDNNPK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 817.3888 2 816.886269 1631.75799 NaN NaN NaN 0.32142 0.00026256 NaN NaN NaN NaN 95.174 0.8708 95.174 94.883 95.754 0 0 0 0 0.00015593 1 57830 87.001 80.76 1 NaN NaN 0 17730000 17730000 0 12773 1405 4866 4990 19930 19930 GFNEGLWEIDNNPK 14 1 0 Unmodified _GFNEGLWEIDNNPK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.8868 2 816.886269 1631.75799 NaN NaN NaN 0.28655 0.00023408 NaN NaN NaN NaN 94.424 0.80618 94.424 94.148 94.955 7.6294E-06 0 0 0 1.7652E-10 2 58719 117.09 109.53 1 NaN NaN 0 24585000 24585000 0 12774 1405 4866 4990 19931;19932 19931 GFNEGLWEIDNNPK 14 1 0 Unmodified _GFNEGLWEIDNNPK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.894 2 816.886269 1631.75799 NaN NaN NaN -0.23764 -0.00019413 NaN NaN NaN NaN 108.22 0.67109 108.22 108.01 108.68 0 0 0 0 2.863E-06 1 62140 99.439 93.467 1 NaN NaN 0 12630000 0 12630000 12775 1405 4866 4990 19933 19933 GFNEGLWEIDNNPK 14 1 0 Unmodified _GFNEGLWEIDNNPK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.8939 2 816.886269 1631.75799 NaN NaN NaN -0.41586 -0.00033971 NaN NaN NaN NaN 108.13 0.67477 108.13 107.91 108.59 0 0 0 0 0.0025167 1 61172 65.395 65.395 1 NaN NaN 0 16674000 0 16674000 12776 1405 4866 4990 19934 19934 GFPTDATLDDIK 12 1 0 Unmodified _GFPTDATLDDIK_ 0 0 0 B5BUB5;P05455;Q14730;E9PGX9;E7ERC4 B5BUB5 B5BUB5 SSB Lupus La protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.8297 2 646.822075 1291.6296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.111 1 87.111 86.611 87.611 0 0 0 0 0.0098018 1 52586 57.174 45.127 1 12777 1077 4867 4991 19935 19935 GFQEVVTPNIFNSR 14 0 1 Unmodified _GFQEVVTPNIFNSR_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.9177 2 804.412454 1606.81036 69083.74 0.60271 0.00048483 -0.66441 -0.00053446 -0.061701 -4.9633E-05 804.412329209767 809.416984579727 105.65 0.60271 105.65 105.35 105.95 -7.6294E-06 171 41 7 0 0 0 0.0019562 1 67071 65.842 65.842 1 1.6785 1.6513 0 14407000 6247400 8159300 12778 892 4868 4992 19936 19936 GFQQISFVNSIATSK 15 1 0 Unmodified _GFQQISFVNSIATSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 817.9359 2 813.927937 1625.84132 67659.66 0.74008 0.00060237 0.1885 0.00015343 0.92859 0.0007558 813.928303085029 817.935129567668 102.95 1.3784 102.95 102.52 103.89 7.6294E-06 917 115 12 0 0 0 2.301E-15 5 63757 132.59 132.59 1 0.77493 0.92881 0 974420000 553060000 421350000 12779 1471 4869 4993 19937;19938;19939;19940;19941 19940 GFQQISFVNSIATSK 15 1 0 Unmodified _GFQQISFVNSIATSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.9269 2 813.927937 1625.84132 67276.23 0.92794 0.00075528 -0.15271 -0.00012429 0.77524 0.00063099 813.928093387853 817.934802416651 102.2 1.247 102.2 101.83 103.07 0 798 97 13 0 0 0 2.2711E-22 4 64244 147.71 147.71 1 0.77997 0.92136 0 1221000000 679960000 541050000 12780 1471 4869 4993 19942;19943;19944;19945 19942 GFQQISFVNSIATSK 15 1 0 Unmodified _GFQQISFVNSIATSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 813.9284 2 813.927937 1625.84132 67059.55 0.87325 0.00071076 -0.1465 -0.00011924 0.72675 0.00059152 813.928726856847 817.935066623 115.01 1.9325 115.01 114.57 116.5 0 548 86 12 0 0 0 1.8363E-10 5 67191 120.53 120.53 1 1.3392 1.2001 0 533310000 222110000 311200000 12781 1471 4869 4993 19946;19947;19948;19949;19950 19948 GFQQISFVNSIATSK 15 1 0 Unmodified _GFQQISFVNSIATSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 814.4303 2 813.927937 1625.84132 66936.92 0.77147 0.00062792 -0.17414 -0.00014174 0.59733 0.00048618 813.928586272072 817.935007841705 114.88 2.263 114.88 114.35 116.62 0 574 98 12 0 0 0 2.5115E-30 4 66157 151.98 151.98 1 1.3567 1.1912 0 610020000 254890000 355130000 12782 1471 4869 4993 19951;19952;19953;19954 19952 GFQQISFVNSIATTK 15 1 0 Unmodified _GFQQISFVNSIATTK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.9354 2 820.935762 1639.85697 67185.79 0.85885 0.00070506 0.31117 0.00025545 1.17 0.00096051 820.935683902117 824.943667745671 104.51 0.77206 104.51 104.12 104.89 0 343 63 7 0 0 0 0.00016254 1 64406 99.5 99.5 1 0.64063 0.71934 0 68195000 42048000 26147000 12783 1679 4870 4994 19955 19955 GFQQISFVNSIATTK 15 1 0 Unmodified _GFQQISFVNSIATTK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.439 2 820.935762 1639.85697 NaN NaN NaN 0.15511 0.00012734 NaN NaN NaN NaN 103.77 0.72658 103.77 103.42 104.14 0 0 0 0 0.0022034 1 65513 82.85 71.631 1 NaN NaN 0 53303000 53303000 0 12784 1679 4870 4994 19956 19956 GFQQISFVNSIATTK 15 1 0 Unmodified _GFQQISFVNSIATTK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.937 2 820.935762 1639.85697 66988.94 0.72269 0.00059328 0.15727 0.00012911 0.87995 0.00072239 820.935644633923 824.943077811707 116.3 0.58868 116.3 116.02 116.61 0 164 25 9 0 0 0 6.0053E-07 2 68274 122.39 122.39 1 1.0534 0.85942 0 32648000 16487000 16161000 12785 1679 4870 4994 19957;19958 19958 GFQQISFVNSIATTK 15 1 0 Unmodified _GFQQISFVNSIATTK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.9367 2 820.935762 1639.85697 67324.09 1.044 0.00085704 0.031724 2.6044E-05 1.0757 0.00088308 820.935314575882 824.942973517161 116.11 0.63943 116.11 115.84 116.48 0 183 30 9 0 0 0 1.8587E-07 2 67195 128.67 128.67 1 1.0756 0.89137 0 34696000 17109000 17587000 12786 1679 4870 4994 19959;19960 19960 GFSDAEIR 8 0 1 Unmodified _GFSDAEIR_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.7195 2 447.719424 893.424296 93257.88 0.21918 9.8133E-05 -0.43762 -0.00019593 -0.21843 -9.7796E-05 447.719310306713 452.723339442485 39.151 0.59942 39.151 38.817 39.416 0 133 46 5 0 0 0 0.032325 1 20198 50.703 6.3085 1 0.67154 0.68823 0 19207000 10888000 8318500 12787 1366 4871 4995 19961 19961 GFSDAEIR 8 0 1 Unmodified _GFSDAEIR_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.7225 2 447.719424 893.424296 92365.09 -0.13911 -6.2281E-05 -0.040683 -1.8214E-05 -0.17979 -8.0495E-05 447.719402375186 452.723486494681 38.144 0.50111 38.144 37.92 38.421 3.8147E-06 108 39 4 0 0 0 0.036793 2 19976 48.561 6.9089 1 0.7338 0.80355 0 32297000 19490000 12808000 12788 1366 4871 4995 19962;19963 19962 GFSDKLDFLEGDQK 14 2 0 Unmodified _GFSDKLDFLEGDQK_ 0 0 1 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 799.8884 2 799.888478 1597.7624 67794.95 0.45335 0.00036263 0.13542 0.00010832 0.58877 0.00047095 799.888170845796 807.902606258388 100.11 0.61824 100.11 99.775 100.39 0 233 51 6 0 0 0 0.042663 1 56561 44.82 38.287 1 0.97992 0.83963 0 8630000 5138400 3491600 12789 1316 4872 4996 19964 19964 GFSDKLDFLEGDQK 14 2 0 Unmodified _GFSDKLDFLEGDQK_ 0 0 1 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.9395 3 533.594744 1597.7624 81300.63 0.39498 0.00021076 -0.59535 -0.00031768 -0.20037 -0.00010691 533.92866641595 538.937704691785 99.909 0.74136 99.909 99.582 100.32 0 337 67 7 0 0 0 0.00081934 2 55543 38.995 36.335 1 0.78495 0.66448 0 15032000 8193800 6837800 12790 1316 4872 4996 19965;19966 19965 GFSDSGGGPPAK 12 1 0 Unmodified _GFSDSGGGPPAK_ 0 0 0 Q9H307;A8K964;G3V5F0;G3V579 Q9H307 Q9H307 PNN Pinin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.7541 2 538.753995 1075.49344 NaN NaN NaN -0.20937 -0.0001128 NaN NaN NaN NaN 21.529 0.28579 21.529 21.405 21.69 0 0 0 0 0.0019127 1 7797 72.643 59.655 1 NaN NaN 0 3534100 3534100 0 12791 2028 4873 4997 19967 19967 GFSEAAAPR 9 0 1 Unmodified _GFSEAAAPR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.2274 2 453.227417 904.44028 87571.13 0.080704 3.6577E-05 0.89887 0.00040739 0.97958 0.00044397 453.227308434332 458.231671657556 26.977 0.65353 26.977 26.764 27.418 0 141 36 8 0 0 0 5.5554E-05 1 12244 111.65 92.843 1 1.1197 1.237 0 56361000 26986000 29375000 12792 1887 4874 4998 19968 19968 GFSEAAAPR 9 0 1 Unmodified _GFSEAAAPR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.2278 2 453.227417 904.44028 89042.16 0.201 9.11E-05 0.97363 0.00044128 1.1746 0.00053238 453.227515911707 458.231583951587 26.586 0.57419 26.586 26.267 26.842 1.9073E-06 137 31 8 0 0 0 1.7362E-05 2 11994 120.49 101.68 1 1.2767 1.4648 0 80770000 37962000 42808000 12793 1887 4874 4998 19969;19970 19970 GFSEEHNTWEPEK 13 1 0 Unmodified _GFSEEHNTWEPEK_ 0 0 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.8572 2 795.346977 1588.6794 68701.63 0.87152 0.00069316 0.41937 0.00033355 1.2909 0.0010267 795.347009383303 799.353989402152 38.573 0.53897 38.573 38.369 38.908 0 158 43 7 0 0 0 0.00013619 1 19768 80.979 74.126 1 0.6309 0.68201 0 35479000 21626000 13853000 12794 1568 4875 4999 19971 19971 GFSEEHNTWEPEK 13 1 0 Unmodified _GFSEEHNTWEPEK_ 0 0 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.5674 3 530.567077 1588.6794 82724.74 0.60256 0.0003197 -0.046798 -2.483E-05 0.55576 0.00029487 530.567012287676 533.238486943086 38.573 0.58455 38.573 38.369 38.953 0 268 47 8 0 0 0 6.4325E-08 1 19852 112.44 108.72 1 0.60387 0.66699 0 56900000 37828000 19072000 12795 1568 4875 4999 19972 19972 GFSEEHNTWEPEK 13 1 0 Unmodified _GFSEEHNTWEPEK_ 0 0 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.891 2 795.346977 1588.6794 69429.91 0.67767 0.00053898 0.3806 0.00030271 1.0583 0.00084169 795.848911013177 799.353975082458 37.451 0.33261 37.451 37.372 37.705 0 82 27 5 0 0 0 0.0045602 1 19469 61.213 56.914 1 0.4628 0.49439 0 23107000 13846000 9261100 12796 1568 4875 4999 19973 19973 GFSEEHNTWEPEK 13 1 0 Unmodified _GFSEEHNTWEPEK_ 0 0 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.9016 3 530.567077 1588.6794 82632.51 0.42096 0.00022335 0.028138 1.4929E-05 0.4491 0.00023828 530.901400728913 533.238484112525 44.496 0.70222 44.496 44.305 45.007 3.8147E-06 315 53 9 0 0 0 3.7669E-05 2 21133 77.527 76.337 1 0.96963 0.77908 0 21571000 10852000 10720000 12797 1568 4875 4999 19974;19975 19975 GFSEEHNTWEPEK 13 1 0 Unmodified _GFSEEHNTWEPEK_ 0 0 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.573 3 530.567077 1588.6794 83216.54 0.6242 0.00033118 -0.28656 -0.00015204 0.33764 0.00017914 530.56687202661 533.238319435369 44.552 0.94808 44.552 44.259 45.208 0 401 66 8 0 0 0 0.0087051 2 20577 31.675 31.675 1 0.91587 0.74784 0 8039500 4025600 4013900 12798 1568 4875 4999 19976;19977 19976 GFSEEHNTWEPEK 13 1 0 Unmodified _GFSEEHNTWEPEK_ 0 0 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 795.3482 2 795.346977 1588.6794 69166.6 0.81987 0.00065208 0.12435 9.8899E-05 0.94422 0.00075098 795.347697900039 799.35378576918 44.508 0.9798 44.508 44.159 45.139 -3.8147E-06 348 64 8 0 0 0 0.011498 1 20623 49.025 42.492 1 0.9378 0.76571 0 8029600 4469200 3560400 12799 1568 4875 4999 19978 19978 GFSLEELR 8 0 1 Unmodified _GFSLEELR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.7509 2 475.750724 949.486896 85909.3 0.38661 0.00018393 -0.15776 -7.5056E-05 0.22884 0.00010887 475.750971078037 480.754314223025 84.021 1.4768 84.021 83.604 85.081 0 592 121 9 0 0 0 0.0029231 3 50143 98.418 71.99 1 0.87663 1.0414 0 968500000 514500000 454000000 12800 733 4876 5000 19979;19980;19981 19980 GFSLEELR 8 0 1 Unmodified _GFSLEELR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.7511 2 475.750724 949.486896 86315.88 0.091332 4.3451E-05 -0.00080888 -3.8482E-07 0.090523 4.3067E-05 475.75106287396 480.75436986993 82.86 1.3205 82.86 82.525 83.846 0 602 102 10 0 0 0 0.0016206 3 50586 107.32 82.686 1 0.8766 1.0251 0 615390000 331940000 283460000 12801 733 4876 5000 19982;19983;19984 19983 GFSLEELR 8 0 1 Unmodified _GFSLEELR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.7511 2 475.750724 949.486896 86867.97 0.47736 0.00022711 -0.27101 -0.00012893 0.20635 9.817E-05 475.750579374351 480.754627359704 96.433 1.6393 96.433 95.975 97.614 0 485 91 9 0 0 0 0.013762 1 53927 64.567 52.374 1 0.75256 0.65 0 95308000 55567000 39741000 12802 733 4876 5000 19985 19985 GFSLEELR 8 0 1 Unmodified _GFSLEELR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.7545 2 475.750724 949.486896 87269.86 0.1775 8.4447E-05 -0.15143 -7.2041E-05 0.026076 1.2406E-05 475.750595355693 480.754690528194 96.295 1.6002 96.295 95.884 97.484 -7.6294E-06 473 86 9 0 0 0 0.032325 2 53012 50.703 36.642 1 0.80068 0.6988 0 80052000 46503000 33549000 12803 733 4876 5000 19986;19987 19986 GFSLLATEDK 10 1 0 Unmodified _GFSLLATEDK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.7824 2 540.782222 1079.54989 80766.19 0.62638 0.00033874 -0.28298 -0.00015303 0.3434 0.0001857 540.782163110776 544.78919473933 79.328 1.1466 79.328 78.738 79.885 0 604 103 8 0 0 0 4.7334E-08 5 47241 116.37 97.681 1 0.67028 0.76378 0 172680000 101600000 71076000 12804 139 4877 5001 19988;19989;19990;19991;19992 19990 GFSLLATEDK 10 1 0 Unmodified _GFSLLATEDK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.782 2 540.782222 1079.54989 81211.21 0.40066 0.00021667 -0.15585 -8.4281E-05 0.24481 0.00013239 540.782227894275 544.789334099898 78.118 1.2055 78.118 77.593 78.799 0 644 103 8 0 0 0 8.0625E-06 5 47066 106.68 89.443 1 0.63385 0.73536 0 220660000 132430000 88228000 12805 139 4877 5001 19993;19994;19995;19996;19997 19993 GFSLLATEDK 10 1 0 Unmodified _GFSLLATEDK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.7828 2 540.782222 1079.54989 81598.05 0.51594 0.00027901 0.03198 1.7294E-05 0.54792 0.0002963 540.782286221562 544.789238711953 90.083 1.5154 90.083 89.616 91.131 -7.6294E-06 538 97 9 0 0 0 1.137E-05 2 49779 104.2 95.668 1 1.1461 0.95643 0 49045000 20757000 28288000 12806 139 4877 5001 19998;19999 19999 GFSLLATEDK 10 1 0 Unmodified _GFSLLATEDK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.7898 2 540.782222 1079.54989 81660.7 0.3821 0.00020663 0.082217 4.4462E-05 0.46431 0.00025109 540.782300849223 544.789259108725 89.999 1.4129 89.999 89.537 90.95 0 477 88 8 0 0 0 0.00097153 2 48841 78.264 68.847 1 1.1505 0.96106 0 43193000 19646000 23547000 12807 139 4877 5001 20000;20001 20000 GFSSGSAVVSGGSR 14 0 1 Unmodified _GFSSGSAVVSGGSR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.3094 2 627.807291 1253.60003 NaN NaN NaN -0.094564 -5.9368E-05 NaN NaN NaN NaN 34.096 0.83961 34.096 33.534 34.374 3.8147E-06 0 0 0 7.0016E-10 1 16738 113.47 92.571 1 NaN NaN 0 39507000 39507000 0 + 12808 1166 4878 5002 20002 20002 GFSSGSAVVSGGSR 14 0 1 Unmodified _GFSSGSAVVSGGSR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.8066 2 627.807291 1253.60003 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.528 1 33.528 33.028 34.028 -3.8147E-06 0 0 0 0.00017135 1 16709 90.685 69.784 1 + 12809 1166 4878 5002 20003 20003 GFSSGSAVVSGGSR 14 0 1 Unmodified _GFSSGSAVVSGGSR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.8074 2 627.807291 1253.60003 NaN NaN NaN 0.24736 0.00015529 NaN NaN NaN NaN 38.796 0.87108 38.796 38.447 39.318 0 0 0 0 1.7804E-09 1 17562 106.01 94.517 1 NaN NaN 0 21606000 21606000 0 + 12810 1166 4878 5002 20004 20004 GFTESFGAANISQAAR 16 0 1 Unmodified _GFTESFGAANISQAAR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BU37 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.8979 2 813.897168 1625.77978 67603.93 0.82408 0.00067072 0.39262 0.00031955 1.2167 0.00099027 814.398955924929 819.402952847605 82.662 0.46159 82.662 82.444 82.905 0 125 37 5 0 0 0 3.6725E-05 2 49362 84.718 84.718 1 0.81113 0.84362 0 13501000 7846000 5655200 12811 1699 4879 5003 20005;20006 20005 GFTESFGAANISQAAR 16 0 1 Unmodified _GFTESFGAANISQAAR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BU37 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.9043 2 813.897168 1625.77978 68952.66 0.93592 0.00076174 0.22492 0.00018306 1.1608 0.0009448 813.89704073785 818.901585777246 81.694 0.47263 81.694 81.449 81.921 0 119 39 4 0 0 0 2.9913E-06 2 49927 90.614 84.888 1 0.88231 0.88037 0 16695000 9503100 7191500 12812 1699 4879 5003 20007;20008 20007 GFTESFGAANISQAAR 16 0 1 Unmodified _GFTESFGAANISQAAR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BU37 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.9019 2 813.897168 1625.77978 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.864 1 81.864 81.364 82.364 0 0 0 0 0.027269 1 50055 42.095 33.514 1 12813 1699 4879 5003 20009 20009 GFTESFGAANISQAAR 16 0 1 Unmodified _GFTESFGAANISQAAR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BU37 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.9023 2 813.897168 1625.77978 73386.52 0.69193 0.00056316 -0.5071 -0.00041273 0.18482 0.00015043 813.897854816787 818.900711128242 94.843 0.47803 94.843 94.581 95.059 0 88 29 5 0 0 0 0.011847 2 52219 32.734 30.322 1 2.1927 1.9677 0 2274100 783340 1490800 12814 1699 4879 5003 20010;20011 20010 GFTGIDSDYEKPETPER 17 1 1 Unmodified _GFTGIDSDYEKPETPER_ 0 0 1 Q5TB52;B4DWB5;O95340 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.642 3 647.633927 1939.87995 77166.44 0.80459 0.00052108 0.5109 0.00033087 1.3155 0.00085195 647.968389473814 653.641885202618 57.88 0.64941 57.88 57.572 58.221 -3.8147E-06 188 51 7 0 0 0 1.6723E-05 1 32743 72.819 69.215 1 5.0712 5.5007 0 15365000 2692500 12673000 12815 1044 4880 5004 20012 20012 GFTIPEAFR 9 0 1 Unmodified _GFTIPEAFR_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.2745 2 519.274367 1036.53418 84939.32 0.5865 0.00030455 -0.0036105 -1.8748E-06 0.58289 0.00030268 519.273791164798 524.278469637845 97.788 0.75511 97.788 97.447 98.202 0 243 61 5 0 0 0 0.0039394 2 59670 70.525 53.139 1 2.7682 2.8472 0 25111000 6200800 18911000 12816 1362 4881 5005 20013;20014 20014 GFTIPEAFR 9 0 1 Unmodified _GFTIPEAFR_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.2789 2 519.274367 1036.53418 84994.59 0.8033 0.00041713 -0.26281 -0.00013647 0.54048 0.00028066 519.273871872131 524.278331956081 96.989 0.83948 96.989 96.537 97.376 0 249 67 6 0 0 0 0.0055856 1 60355 66.351 48.965 1 3.3833 3.5966 0 24182000 5927200 18254000 12817 1362 4881 5005 20015 20015 GFTIPEAFR 9 0 1 Unmodified _GFTIPEAFR_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.2788 2 519.274367 1036.53418 86130.42 0.49456 0.00025681 -0.084238 -4.3743E-05 0.41032 0.00021307 519.273694073479 524.278586075114 110.81 0.51288 110.81 110.56 111.08 0 77 22 5 0 0 0 0.047679 1 64059 38.962 26.606 1 2.168 1.8656 0 2678600 895660 1782900 12818 1362 4881 5005 20016 20016 GFTIPEAFR 9 0 1 Unmodified _GFTIPEAFR_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 524.2787 2 519.274367 1036.53418 84325.64 0.45716 0.00023739 -0.59093 -0.00030685 -0.13376 -6.946E-05 519.27354773087 524.27842210797 110.65 0.49532 110.65 110.42 110.91 0 93 25 5 0 0 0 0.018672 1 62969 51.854 40.086 1 1.7763 1.5929 0 1993500 829550 1163900 12819 1362 4881 5005 20017 20017 GFTLGVEDILVK 12 1 0 Unmodified _GFTLGVEDILVK_ 0 0 0 O95602;B9ZVN9;B7ZKR9;B7Z8X7;B7Z284 O95602 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.8762 2 645.868828 1289.7231 78930.55 1.2877 0.0008317 -0.58109 -0.00037531 0.70662 0.00045639 645.868643839862 649.875402338167 118.58 0.39124 118.58 118.39 118.78 -7.6294E-06 61 22 4 0 0 0 0.00058242 1 76147 68.847 63.627 1 0.89799 0.93362 0 4051900 2416600 1635300 12820 1428 4882 5006 20018 20018 GFTLGVEDILVK 12 1 0 Unmodified _GFTLGVEDILVK_ 0 0 0 O95602;B9ZVN9;B7ZKR9;B7Z8X7;B7Z284 O95602 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1;DNA-directed RNA polymerase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.8771 2 645.868828 1289.7231 NaN NaN NaN -0.23493 -0.00015173 NaN NaN NaN NaN 118.07 0.29179 118.07 117.91 118.2 -7.6294E-06 0 0 0 0.010991 1 77537 54.539 45.145 1 NaN NaN 0 2847400 0 2847400 12821 1428 4882 5006 20019 20019 GFTLNDAANSR 11 0 1 Unmodified _GFTLNDAANSR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.2879 2 583.283451 1164.55235 79467.37 0.66742 0.0003893 0.21336 0.00012445 0.88078 0.00051374 583.283560911739 588.287621336004 48.474 0.67325 48.474 48.107 48.78 -3.8147E-06 153 52 4 0 0 0 7.8974E-05 1 26366 98.044 92.083 1 2.0199 2.0665 0 31725000 15451000 16274000 12822 1207 4883 5007 20020 20020 GFVEIQTPK 9 1 0 Unmodified _GFVEIQTPK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.7818 2 509.782025 1017.5495 90479.52 0.2905 0.00014809 -0.13635 -6.9509E-05 0.15415 7.8585E-05 509.781894625358 513.789211686009 77.126 0.62869 77.126 76.793 77.421 0 123 41 4 0 0 0 0.037381 1 41287 43.083 30.046 1 0.99176 0.82789 0 1800500 1012700 787870 12823 610 4884 5008 20021 20021 GFVEIQTPK 9 1 0 Unmodified _GFVEIQTPK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.7897 2 509.782025 1017.5495 89384.52 0.38328 0.00019539 -0.031268 -1.594E-05 0.35202 0.00017945 509.78185871743 513.789164383338 77.334 0.56999 77.334 77.037 77.607 -7.6294E-06 105 37 5 0 0 0 0.020683 1 40564 50.04 33.838 1 0.95717 0.83954 0 1287900 631170 656780 12824 610 4884 5008 20022 20022 GFVHPDPLWIPFK 13 1 0 Unmodified _GFVHPDPLWIPFK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.6169 3 518.281883 1551.82382 84798.05 0.71389 0.00036999 -0.36353 -0.00018841 0.35035 0.00018158 518.28158782054 521.28737454563 115.92 0.9983 115.92 115.56 116.56 -7.6294E-06 351 65 8 0 0 0 0.017617 3 73677 27.681 27.681 1 0.80671 0.79537 0 24697000 14146000 10552000 12825 908 4885 5009 20023;20024;20025 20025 GFVHPDPLWIPFK 13 1 0 Unmodified _GFVHPDPLWIPFK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.4208 2 776.919187 1551.82382 70367.08 1.1345 0.00088138 0.085744 6.6616E-05 1.2202 0.000948 777.420616752472 780.927479031185 115.87 0.59602 115.87 115.56 116.16 0 183 37 7 0 0 0 6.8156E-10 1 73920 114.5 114.5 1 0.88488 0.93337 0 15492000 8149700 7342400 12826 908 4885 5009 20026 20026 GFVHPDPLWIPFK 13 1 0 Unmodified _GFVHPDPLWIPFK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.2877 3 518.281883 1551.82382 84368.73 0.60448 0.00031329 -0.18854 -9.7716E-05 0.41594 0.00021558 518.281702803044 521.287423876184 114.8 0.8938 114.8 114.54 115.44 7.6294E-06 331 57 8 0 0 0 0.0024121 2 74640 44.616 44.616 1 0.78079 0.86349 0 45146000 22585000 22561000 12827 908 4885 5009 20027;20028 20028 GFVHPDPLWIPFK 13 1 0 Unmodified _GFVHPDPLWIPFK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.2878 3 518.281883 1551.82382 84444.7 0.55778 0.00028909 -0.024072 -1.2476E-05 0.53371 0.00027661 518.281800850524 520.953213041236 125.51 0.90694 125.51 125.22 126.13 7.6294E-06 191 37 9 0 0 0 0.00010197 2 75271 64.121 64.121 1 1.594 1.2358 0 13747000 5618900 8127800 12828 908 4885 5009 20029;20030 20029 GFVHPDPLWIPFK 13 1 0 Unmodified _GFVHPDPLWIPFK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.9194 2 776.919187 1551.82382 70279.85 0.92862 0.00072146 -0.025413 -1.9744E-05 0.9032 0.00070172 776.919061603202 780.926328410452 125.5 0.98831 125.5 125.22 126.21 0 187 40 10 0 0 0 0.0064708 2 75280 59.067 59.067 1 1.4155 1.1019 0 15588000 6580700 9007500 12829 908 4885 5009 20031;20032 20031 GFVHPDPLWIPFK 13 1 0 Unmodified _GFVHPDPLWIPFK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.9536 3 518.281883 1551.82382 83683.48 0.48578 0.00025177 -0.15363 -7.9623E-05 0.33215 0.00017215 518.281722262615 520.953165490538 125.24 0.79064 125.24 125.01 125.8 0 182 34 9 0 0 0 0.0017454 2 74165 47.062 47.062 1 1.6961 1.3988 0 12039000 4551900 7486700 12830 908 4885 5009 20033;20034 20033 GFVHPDPLWIPFK 13 1 0 Unmodified _GFVHPDPLWIPFK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.927 2 776.919187 1551.82382 70718.88 0.83395 0.00064791 0.0090445 7.0268E-06 0.84299 0.00065494 776.9190618158 780.926321760595 125.24 0.68743 125.24 125.01 125.7 7.6294E-06 177 29 9 0 0 0 0.00056717 2 74205 74.162 74.162 1 1.5239 1.2236 0 14460000 5735400 8724500 12831 908 4885 5009 20035;20036 20036 GFVLQDTVEQLR 12 0 1 Unmodified _GFVLQDTVEQLR_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9;H0YHV5;H0YIC2 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.8782 2 702.877716 1403.74088 74419.34 1.0846 0.00076232 -0.63121 -0.00044366 0.45335 0.00031865 702.877847927916 707.881254497426 114.18 0.34686 114.18 114 114.35 0 42 14 4 0 0 0 0.01851 1 66640 40.727 40.727 1 1.2782 1.1294 0 1475300 743570 731710 12832 732 4886 5010 20037 20037 GFVLQDTVEQLR 12 0 1 Unmodified _GFVLQDTVEQLR_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9;H0YHV5;H0YIC2 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.8777 2 702.877716 1403.74088 73583.03 0.67033 0.00047116 0.10374 7.2919E-05 0.77407 0.00054408 702.877244278344 707.881828970373 114 0.44121 114 113.83 114.27 -7.6294E-06 45 18 4 0 0 0 0.0019217 3 65621 59.908 43.654 1 1.4412 1.2792 0 1926000 782770 1143200 12833 732 4886 5010 20038;20039;20040 20038 GFVPNMQVEGVFYVNDALEK 20 1 0 Oxidation (M) _GFVPNM(ox)QVEGVFYVNDALEK_ GFVPNM(1)QVEGVFYVNDALEK GFVPNM(83.5)QVEGVFYVNDALEK 0 1 0 Q9Y3I0;B4DNA0;B4DNG5;B4DXF1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1141.0621 2 1136.55136 2271.08817 57823.4 0.31079 0.00035323 -0.0082185 -9.3408E-06 0.30258 0.00034389 1137.05268038522 1141.06030956161 115.02 0.45722 115.02 114.77 115.23 0 157 29 8 0 0 0 2.1143E-07 1 73110 83.499 83.499 1 1.7524 1.7839 0 13285000 4897800 8387300 12834 2137 4887 5011 20041 20041 1973 GFVPSPTSQPGGHESLVDR 19 0 1 Unmodified _GFVPSPTSQPGGHESLVDR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;B4DT32 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.6625 3 656.325428 1965.95445 72482.24 0.43437 0.00028509 0.35246 0.00023133 0.78683 0.00051642 656.326337321257 659.661950934167 66.323 0.73003 66.323 66.015 66.745 0 237 61 6 0 0 0 7.7027E-05 1 38231 35.159 29.617 1 0.75098 0.77146 0 25506000 14885000 10621000 12835 363 4888 5012 20042 20042 GFVPSPTSQPGGHESLVDR 19 0 1 Unmodified _GFVPSPTSQPGGHESLVDR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;B4DT32 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.9971 3 656.325428 1965.95445 72875.61 0.56036 0.00036778 0.17257 0.00011326 0.73293 0.00048104 656.325062736221 659.996003269485 64.798 0.5127 64.798 64.571 65.084 0 194 43 6 0 0 0 1.2733E-05 1 38177 37.237 37.237 1 0.98646 1.08 0 32600000 18259000 14341000 12836 363 4888 5012 20043 20043 GFVQVDDGRK 10 1 1 Unmodified _GFVQVDDGRK_ 0 0 1 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.8027 2 560.790912 1119.56727 83222.42 0.70544 0.0003956 0.16697 9.3635E-05 0.87241 0.00048924 560.790596725519 569.802369709101 26.895 0.30075 26.895 26.764 27.065 -1.9073E-06 77 19 7 0 0 0 0.00026049 1 12258 102.51 97.525 1 1.9294 2.245 0 30442000 9552800 20889000 12837 1609 4889 5013 20044 20044 GFVTGGADK 9 1 0 Unmodified _GFVTGGADK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.2238 2 426.216517 850.418482 91155.86 0.12351 5.2643E-05 -0.086101 -3.6698E-05 0.037411 1.5945E-05 426.216517557563 430.223376262997 24.001 0.46881 24.001 23.769 24.237 1.9073E-06 93 22 7 0 0 0 0.0038088 2 9737 70.856 41.48 1 0.786 0.86883 0 57300000 30331000 26969000 12838 1827 4890 5014 20045;20046 20045 GFVTGGADK 9 1 0 Unmodified _GFVTGGADK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.9028 1 851.425758 850.418482 66804.54 0.81061 0.00069017 -0.20214 -0.00017211 0.60847 0.00051806 851.425624210714 859.439445130114 24.002 0.27439 24.002 23.868 24.143 0 42 13 4 0 0 0 0.038208 1 9798 67.897 44.129 1 0.98774 0.97349 0 19516000 9739600 9776300 12839 1827 4890 5014 20047 20047 GFVVINQK 8 1 0 Unmodified _GFVVINQK_ 0 0 0 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;B4DN39;Q92526 Q59ET3 Q59ET3 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.7722 2 452.766178 903.517802 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.314 1 51.314 50.814 51.814 0 0 0 0 0.0047036 1 29075 88.734 61.418 1 12840 389 4891 5015 20048 20048 GFYDPPRR 8 0 2 Unmodified _GFYDPPRR_ 0 0 1 Q53F48;A0A024QZK8;P31942 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 336.5079 3 336.506764 1006.49846 106168.2 0.19001 6.3939E-05 0.19082 6.4211E-05 0.38082 0.00012815 336.50674137183 343.178884954626 26.157 0.4655 26.157 25.953 26.418 1.9073E-06 59 24 5 0 0 0 0.020579 1 11615 29.376 24.685 1 1.9075 1.9245 0 10353000 4208900 6143700 12841 23 4892 5016 20049 20049 GFYIYQEGVK 10 1 0 Unmodified _GFYIYQEGVK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.3133 2 602.305864 1202.59717 79170.95 0.78071 0.00047023 1.2067 0.00072679 1.9874 0.001197 602.305875484675 606.312985592427 75.322 0.77126 75.322 75.059 75.83 7.6294E-06 285 64 7 0 0 0 0.0023262 1 44232 69.598 64.116 1 1.2493 1.2796 0 28464000 12289000 16175000 12842 1228 4893 5017 20050 20050 GFYIYQEGVK 10 1 0 Unmodified _GFYIYQEGVK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.3137 2 602.305864 1202.59717 79079.34 0.60933 0.000367 0.99058 0.00059663 1.5999 0.00096363 602.305519016261 606.312799200183 74.145 0.76031 74.145 73.722 74.483 0 298 63 7 0 0 0 0.0023262 1 44503 69.598 63.563 1 1.2548 1.2732 0 26399000 10991000 15408000 12843 1228 4893 5017 20051 20051 GFYIYQEGVK 10 1 0 Unmodified _GFYIYQEGVK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.3134 2 602.305864 1202.59717 78872.7 0.48825 0.00029408 0.35433 0.00021341 0.84258 0.00050749 602.30587189922 606.313108055604 85.805 0.4942 85.805 85.58 86.074 7.6294E-06 119 29 5 0 0 0 0.0026273 2 46929 68.224 63.772 1 1.0468 0.82957 0 4825600 2387000 2438600 12844 1228 4893 5017 20052;20053 20052 GFYIYQEGVK 10 1 0 Unmodified _GFYIYQEGVK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 606.3137 2 602.305864 1202.59717 NaN NaN NaN 0.25294 0.00015235 NaN NaN NaN NaN 85.87 0.54488 85.87 85.686 86.231 -7.6294E-06 0 0 0 0.005569 1 46193 68.224 63.772 1 NaN NaN 0 1891800 0 1891800 12845 1228 4893 5017 20054 20054 GGAANQALLHSK 12 1 0 Unmodified _GGAANQALLHSK_ 0 0 0 B2RWP5;Q96L73;Q96MN8;Q8NB95;A4QPE5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.8179 2 583.817461 1165.62037 NaN NaN NaN -0.064512 -3.7663E-05 NaN NaN NaN NaN 21.471 0.20891 21.471 21.358 21.567 0 0 0 0 0.0015987 1 7626 76.228 50.606 1 NaN NaN 0 3119900 3119900 0 12846 898 4894 5018 20055 20055 GGAANQALLHSK 12 1 0 Unmodified _GGAANQALLHSK_ 0 0 0 B2RWP5;Q96L73;Q96MN8;Q8NB95;A4QPE5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8249 2 583.817461 1165.62037 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.524 1 21.524 21.024 22.024 0 0 0 0 0.015083 1 7653 54.198 36.212 1 12847 898 4894 5018 20056 20056 GGAANQALLHSK 12 1 0 Unmodified _GGAANQALLHSK_ 0 0 0 B2RWP5;Q96L73;Q96MN8;Q8NB95;A4QPE5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.8259 2 583.817461 1165.62037 76234.99 0.36696 0.00021424 1.9734 0.0011521 2.3404 0.0013663 583.817905674488 587.825737653904 23.268 0.31247 23.268 23.146 23.459 0 43 15 5 0 0 0 0.050985 1 7823 37.6 25.023 1 2.2144 1.9044 0 1113200 372970 740210 12848 898 4894 5018 20057 20057 GGAANQALLHSK 12 1 0 Unmodified _GGAANQALLHSK_ 0 0 0 B2RWP5;Q96L73;Q96MN8;Q8NB95;A4QPE5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.8246 2 583.817461 1165.62037 80341.52 0.28635 0.00016718 -0.46043 -0.00026881 -0.17408 -0.00010163 583.816907055584 587.824578668172 23.173 0.28442 23.173 23.04 23.325 0 42 11 7 0 0 0 0.012686 1 7283 47.894 40.766 1 2.0309 1.683 0 1741000 566710 1174200 12849 898 4894 5018 20058 20058 GGAAPEGPNEAEVTSGKPEQEVPDAEEEK 29 2 0 Unmodified _GGAAPEGPNEAEVTSGKPEQEVPDAEEEK_ 0 0 1 Q53H03;P49321;Q6PJY7;E9PPR5;B4DS57 Q53H03 Q53H03 NASP Nuclear autoantigenic sperm protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 990.1287 3 984.451138 2950.33158 NaN NaN NaN 0.14112 0.00013892 NaN NaN NaN NaN 53.482 0.22359 53.482 53.332 53.556 3.8147E-06 0 0 0 0.022077 1 29953 28.964 22.241 1 NaN NaN 0 6721100 0 6721100 12850 1579 4895 5019 20059 20059 GGAAPEGPNEAEVTSGKPEQEVPDAEEEK 29 2 0 Unmodified _GGAAPEGPNEAEVTSGKPEQEVPDAEEEK_ 0 0 1 Q53H03;P49321;Q6PJY7;E9PPR5;B4DS57 Q53H03 Q53H03 NASP Nuclear autoantigenic sperm protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 990.1283 3 984.451138 2950.33158 NaN NaN NaN -0.072711 -7.1581E-05 NaN NaN NaN NaN 52.415 0.34026 52.415 52.178 52.518 0 0 0 0 0.0042927 1 29797 30.509 27.86 1 NaN NaN 0 6791300 0 6791300 12851 1579 4895 5019 20060 20060 GGAAVDPDSGLEHSAHVLEK 20 1 0 Unmodified _GGAAVDPDSGLEHSAHVLEK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3312 3 663.660587 1987.95993 74408.01 0.80558 0.00053463 0.23967 0.00015906 1.0453 0.00069369 663.995031469101 666.332105360033 56.209 1.0824 56.209 55.583 56.665 0 373 87 6 0 0 0 8.6762E-07 4 31538 64.249 64.249 1 0.66506 0.72888 0 52643000 30029000 22614000 12852 139 4896 5020 20061;20062;20063;20064 20064 GGAAVDPDSGLEHSAHVLEK 20 1 0 Unmodified _GGAAVDPDSGLEHSAHVLEK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3345 3 663.660587 1987.95993 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.234 1 55.234 54.734 55.734 3.8147E-06 0 0 0 0.033171 1 31047 43.116 34.324 1 12853 139 4896 5020 20065 20065 GGAAVDPDSGLEHSAHVLEK 20 1 0 Unmodified _GGAAVDPDSGLEHSAHVLEK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.3785 3 663.660587 1987.95993 74341.11 0.36864 0.00024465 0.033387 2.2158E-05 0.40203 0.00026681 663.660576675195 666.666339702871 53.385 0.84372 53.385 53.14 53.984 0 427 80 8 0 0 0 1.5487E-06 1 30659 63.488 51.734 1 0.60828 0.68204 0 78970000 49079000 29891000 12854 139 4896 5020 20066 20066 GGAAVDPDSGLEHSAHVLEK 20 1 0 Unmodified _GGAAVDPDSGLEHSAHVLEK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.3321 3 663.660587 1987.95993 73498.61 0.3751 0.00024894 0.29833 0.00019799 0.67342 0.00044692 663.99506319968 666.332140731257 64.077 0.79563 64.077 63.743 64.539 0 513 64 11 0 0 0 2.1104E-06 2 32883 52.541 52.541 1 1.1459 0.95547 0 48532000 23623000 24909000 12855 139 4896 5020 20067;20068 20067 GGAAVDPDSGLEHSAHVLEK 20 1 0 Unmodified _GGAAVDPDSGLEHSAHVLEK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.3325 3 663.660587 1987.95993 73847.66 0.32991 0.00021895 0.48469 0.00032167 0.8146 0.00054062 663.995144106255 666.33223386395 64.544 0.79388 64.544 64.21 65.004 0 486 67 11 0 0 0 2.1104E-06 2 32504 52.541 52.541 1 1.1386 0.9449 0 36088000 17196000 18892000 12856 139 4896 5020 20069;20070 20070 GGAEGELQALR 11 0 1 Unmodified _GGAEGELQALR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.7883 2 550.78837 1099.56219 NaN NaN NaN -0.21443 -0.00011811 NaN NaN NaN NaN 52.243 0.72334 52.243 51.924 52.647 3.8147E-06 0 0 0 0.0022065 1 28951 76.827 57.04 1 NaN NaN 0 10243000 10243000 0 12857 1754 4897 5021 20071 20071 GGAEGELQALR 11 0 1 Unmodified _GGAEGELQALR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.793 2 550.78837 1099.56219 NaN NaN NaN -1.017 -0.00056015 NaN NaN NaN NaN 52.197 0.91177 52.197 51.96 52.872 0 0 0 0 1.656E-05 1 28976 103.55 77.162 1 NaN NaN 0 17314000 0 17314000 12858 1754 4897 5021 20072 20072 GGAEGELQALR 11 0 1 Unmodified _GGAEGELQALR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.7936 2 550.78837 1099.56219 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.888 1 50.888 50.388 51.388 0 0 0 0 0.00032109 1 28775 78.334 54.18 1 12859 1754 4897 5021 20073 20073 GGAEGELQALR 11 0 1 Unmodified _GGAEGELQALR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.7922 2 550.78837 1099.56219 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.972 1 50.972 50.472 51.472 0 0 0 0 3.7956E-06 1 28839 96.331 63.069 1 12860 1754 4897 5021 20074 20074 GGAEQFMEETER 12 0 1 Oxidation (M) _GGAEQFM(ox)EETER_ GGAEQFM(1)EETER GGAEQFM(104.22)EETER 0 1 0 Q6IBT3;Q53HV2;Q99832;B7Z7I4;B7Z1C9 Q6IBT3 Q6IBT3 CCT7 T-complex protein 1 subunit eta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.2979 2 700.293356 1398.57216 NaN NaN NaN 0.34282 0.00024007 NaN NaN NaN NaN 29.052 0.20509 29.052 28.901 29.106 -1.9073E-06 0 0 0 2.0525E-06 1 13950 104.22 90.844 1 NaN NaN 0 5514800 0 5514800 12861 1791 4898 5022 20075 20075 1657 GGAEQFMEETER 12 0 1 Oxidation (M) _GGAEQFM(ox)EETER_ GGAEQFM(1)EETER GGAEQFM(41.28)EETER 0 1 0 Q6IBT3;Q53HV2;Q99832;B7Z7I4;B7Z1C9 Q6IBT3 Q6IBT3 CCT7 T-complex protein 1 subunit eta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.2969 2 700.293356 1398.57216 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.211 1 28.211 27.711 28.711 1.9073E-06 0 0 0 0.027549 1 13408 41.283 35.917 1 12862 1791 4898 5022 20076 20076 1657 GGAPAEGEGAAETLPEASR 19 0 1 Unmodified _GGAPAEGEGAAETLPEASR_ 0 0 0 Q9Y6K1;F8WE91;Q59HC6 Q9Y6K1 Q9Y6K1 DNMT3A DNA (cytosine-5)-methyltransferase 3A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.9201 2 885.418662 1768.82277 64883.4 0.59867 0.00053007 -0.4018 -0.00035576 0.19687 0.00017431 885.418689389561 890.422781882393 49.084 0.46318 49.084 48.804 49.268 0 149 36 6 0 0 0 3.0377E-08 1 26821 94.09 88.596 1 1.0264 1.0251 0 16584000 9661100 6922900 12863 2153 4899 5023 20077 20077 GGAPAEGEGAAETLPEASR 19 0 1 Unmodified _GGAPAEGEGAAETLPEASR_ 0 0 0 Q9Y6K1;F8WE91;Q59HC6 Q9Y6K1 Q9Y6K1 DNMT3A DNA (cytosine-5)-methyltransferase 3A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.4184 2 885.418662 1768.82277 66842.25 0.38683 0.00034251 -0.3341 -0.00029582 0.052734 4.6691E-05 885.418420719402 890.422878755586 48.08 0.38461 48.08 47.792 48.177 0 76 25 5 0 0 0 7.0863E-17 1 26776 119.87 113.21 1 1.014 1.0161 0 17223000 6776300 10447000 12864 2153 4899 5023 20078 20078 GGAPAEGEGAAETLPEASR 19 0 1 Unmodified _GGAPAEGEGAAETLPEASR_ 0 0 0 Q9Y6K1;F8WE91;Q59HC6 Q9Y6K1 Q9Y6K1 DNMT3A DNA (cytosine-5)-methyltransferase 3A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 890.4227 2 885.418662 1768.82277 65949.98 0.26097 0.00023107 -0.1682 -0.00014893 0.092774 8.2144E-05 885.920249979208 890.422182321419 57.728 0.68132 57.728 57.261 57.942 0 138 48 5 0 0 0 3.297E-05 1 28631 54.598 54.598 1 1.7143 1.4752 0 2776400 1103300 1673100 12865 2153 4899 5023 20079 20079 GGAPFQFGGQR 11 0 1 Unmodified _GGAPFQFGGQR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.2784 2 561.277972 1120.54139 82872.34 0.52865 0.00029672 -0.0084406 -4.7375E-06 0.52021 0.00029198 561.27770693657 566.282031254021 59.142 0.47936 59.142 58.984 59.463 0 117 36 4 0 0 0 0.025004 1 33743 41.448 41.448 1 1.2656 1.2614 0 8114200 3200900 4913300 12866 2002 4900 5024 20080 20080 GGDDLGTEIANTLYR 15 0 1 Unmodified _GGDDLGTEIANTLYR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.8934 2 797.889009 1593.76346 67689.38 0.88124 0.00070313 -0.2118 -0.00016899 0.66943 0.00053413 797.888951286917 802.892807629361 105.91 0.75026 105.91 105.57 106.32 0 256 55 7 0 0 0 2.1296E-10 2 65628 119.76 119.76 1 0.85092 0.87685 0 19806000 10026000 9780100 12867 120 4901 5025 20081;20082 20082 GGDDLGTEIANTLYR 15 0 1 Unmodified _GGDDLGTEIANTLYR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.8946 2 797.889009 1593.76346 67785.23 0.90662 0.00072338 -0.37581 -0.00029986 0.5308 0.00042352 797.888929984941 802.892891872708 105.31 0.68733 105.31 105.03 105.72 0 219 49 6 0 0 0 1.7366E-06 2 66710 99.215 91.835 1 0.86936 0.96781 0 43601000 22537000 21064000 12868 120 4901 5025 20083;20084 20083 GGDDLGTEIANTLYR 15 0 1 Unmodified _GGDDLGTEIANTLYR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 802.8937 2 797.889009 1593.76346 66410.13 0.68136 0.00054365 -0.65209 -0.0005203 0.029265 2.335E-05 797.888630887953 802.893231228275 117.52 0.58804 117.52 117.2 117.79 0 150 26 8 0 0 0 7.7621E-22 3 69206 140.78 130.55 1 0.95553 0.77886 0 15202000 8300500 6901800 12869 120 4901 5025 20085;20086;20087 20086 GGDDLGTEIANTLYR 15 0 1 Unmodified _GGDDLGTEIANTLYR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 802.8952 2 797.889009 1593.76346 67113.85 0.56619 0.00045175 -0.37978 -0.00030303 0.1864 0.00014873 797.888926735787 802.893214209559 117.41 0.58004 117.41 117.15 117.73 0 154 27 9 0 0 0 0.028762 1 68127 27.862 27.862 1 0.99607 0.84833 0 19605000 9757000 9847700 12870 120 4901 5025 20088 20088 GGDLMAYDR 9 0 1 Oxidation (M) _GGDLM(ox)AYDR_ GGDLM(1)AYDR GGDLM(48.79)AYDR 0 1 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;B3KU16 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.7297 2 507.221474 1012.42839 83308.3 0.32012 0.00016237 0.7843 0.00039781 1.1044 0.00056019 507.221379864151 512.225677778159 27.122 0.83348 27.122 26.777 27.61 1.9073E-06 184 48 7 0 0 0 0.011195 1 12274 48.794 34.019 1 2.5021 2.5916 0 23026000 6648600 16377000 12871 102 4902 5026 20089 20089 88 GGDLMAYDR 9 0 1 Oxidation (M) _GGDLM(ox)AYDR_ GGDLM(1)AYDR GGDLM(49.42)AYDR 0 1 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;B3KU16 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.2257 2 507.221474 1012.42839 86651.14 0.61942 0.00031418 1.2378 0.00062786 1.8573 0.00094205 507.221255443231 512.225737384142 26.707 0.71427 26.707 26.418 27.132 1.9073E-06 124 34 6 0 0 0 0.010439 1 12040 49.418 32.033 1 2.5068 2.7038 0 26226000 8910900 17315000 12872 102 4902 5026 20090 20090 88 GGDSIGETPTPGASK 15 1 0 Unmodified _GGDSIGETPTPGASK_ 0 0 0 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3389 2 687.330795 1372.64704 NaN NaN NaN 0.45973 0.00031598 NaN NaN NaN NaN 30.573 0.37214 30.573 30.345 30.717 -1.9073E-06 0 0 0 7.996E-07 1 14913 96.113 68.81 1 NaN NaN 0 3091400 0 3091400 12873 1408 4903 5027 20091 20091 GGDSIGETPTPGASK 15 1 0 Unmodified _GGDSIGETPTPGASK_ 0 0 0 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.3376 2 687.330795 1372.64704 75932.26 0.60988 0.00041919 0.45102 0.00031 1.0609 0.00072919 687.331133116307 691.338156675912 30.021 0.52411 30.021 29.804 30.328 -1.9073E-06 128 41 4 0 0 0 0.00018957 3 14534 77.062 62.375 1 1.6406 1.6667 0 12731000 5057700 7673700 12874 1408 4903 5027 20092;20093;20094 20092 GGEADNLDEFLK 12 1 0 Unmodified _GGEADNLDEFLK_ 0 0 0 A0A024R9J0;O60216 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.311 2 654.309332 1306.60411 77553.65 1.2362 0.00080885 0.65276 0.0004271 1.889 0.001236 654.309917508184 658.316786165581 90.381 0.64896 90.381 90.02 90.669 0 203 56 6 0 0 0 0.00029759 1 55739 73.067 48.212 1 0.59185 0.59369 0 15872000 10357000 5515000 12875 280 4904 5028 20095 20095 GGELVYTDSEAR 12 0 1 Unmodified _GGELVYTDSEAR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.811 2 648.806956 1295.59936 75229.73 1.0509 0.00068186 -0.33495 -0.00021732 0.71599 0.00046454 648.806606486179 653.810857402717 41.405 0.58963 41.405 41.184 41.774 0 229 50 8 0 0 0 8.1241E-05 2 21713 96.89 75.426 1 1.6885 1.8733 0 68173000 24575000 43598000 12876 1754 4905 5029 20096;20097 20096 GGELVYTDSEAR 12 0 1 Unmodified _GGELVYTDSEAR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.8068 2 648.806956 1295.59936 73731.1 0.73821 0.00047896 -0.47335 -0.00030712 0.26486 0.00017184 648.805567398278 653.811144715029 40.554 0.38132 40.554 40.432 40.813 0 111 28 5 0 0 0 9.0593E-05 1 21622 96.342 79.218 1 1.4238 1.6435 0 55395000 25930000 29465000 12877 1754 4905 5029 20098 20098 GGELVYTDSEAR 12 0 1 Unmodified _GGELVYTDSEAR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.8099 2 648.806956 1295.59936 NaN NaN NaN -0.069293 -4.4958E-05 NaN NaN NaN NaN 40.419 0.5428 40.419 40.089 40.632 0 0 0 0 2.3368E-05 2 21376 100.48 82.165 1 NaN NaN 0 29228000 0 29228000 12878 1754 4905 5029 20099;20100 20100 GGELVYTDSEAR 12 0 1 Unmodified _GGELVYTDSEAR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.812 2 648.806956 1295.59936 NaN NaN NaN 0.22099 0.00014338 NaN NaN NaN NaN 47.782 0.8008 47.782 47.268 48.069 3.8147E-06 0 0 0 0.022819 1 23082 50.194 30.879 1 NaN NaN 0 3310500 0 3310500 12879 1754 4905 5029 20101 20101 GGEPDLQTVGK 11 1 0 Unmodified _GGEPDLQTVGK_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.7897 2 550.782753 1099.55095 79320.01 0.19532 0.00010758 0.9165 0.00050479 1.1118 0.00061237 550.783437288325 554.789668675016 42.693 0.85868 42.693 42.268 43.127 0 276 56 7 0 0 0 0.021359 1 19432 43.308 32.936 1 1.2385 1.0165 0 5260700 2545600 2715100 12880 1721 4906 5030 20102 20102 GGEPQGPPFIK 11 1 0 Unmodified _GGEPQGPPFIK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.8065 2 563.798206 1125.58186 80364.35 0.71005 0.00040033 0.93678 0.00052816 1.6468 0.00092848 563.798679375141 567.806511442836 59.748 0.58952 59.748 59.489 60.079 0 144 50 4 0 0 0 0.00068785 1 34866 73.248 73.248 1 2.9631 3.008 0 12808000 3925000 8882800 12881 397;1622 4907 5031 20103 20103 GGFAVQAK 8 1 0 Unmodified _GGFAVQAK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4;Q05CP8 Q8TDN6;Q05CP8 Q8TDN6 BRIX1;BXDC2;CCDC6 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.2233 2 389.216321 776.418088 98177.73 0.12865 5.0072E-05 -0.32489 -0.00012645 -0.19624 -7.6379E-05 389.216258552205 393.223284314756 27.611 0.63232 27.611 27.357 27.99 -1.9073E-06 262 40 10 0 0 0 0.014565 2 12723 62.714 26.127 1 0.94845 1.0748 0 97883000 52354000 45528000 12882 1934;1686 4908 5032 20104;20105 20104 GGFAVQAK 8 1 0 Unmodified _GGFAVQAK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4;Q05CP8 Q8TDN6;Q05CP8 Q8TDN6 BRIX1;BXDC2;CCDC6 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.2236 2 389.216321 776.418088 96182.6 0.18569 7.2273E-05 -0.35498 -0.00013816 -0.16929 -6.5889E-05 389.216281583003 393.223336291296 27.14 0.59986 27.14 26.883 27.483 0 123 29 8 0 0 0 0.010809 1 12503 71.378 39.264 1 1.0074 1.126 0 99924000 45953000 53971000 12883 1934;1686 4908 5032 20106 20106 GGFCNFMHLK 10 1 0 Oxidation (M) _GGFCNFM(ox)HLK_ GGFCNFM(1)HLK GGFCNFM(69.2)HLK 0 1 0 P0DN76;Q01081;Q7Z780 P0DN76 P0DN76 U2AF1 Splicing factor U2AF 35 kDa subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.7834 2 613.775893 1225.53723 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.968 1 44.968 44.468 45.468 0 0 0 0 0.00053376 1 24626 69.198 55.924 1 12884 1463 4909 5033 20107 20107 1177 GGFDGEYQDDSLDLLR 16 0 1 Unmodified _GGFDGEYQDDSLDLLR_ 0 0 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.4073 2 900.407763 1798.80097 64362.41 0.71089 0.00064009 1.1399 0.0010264 1.8508 0.0016665 900.407714547512 905.411590165809 106.73 0.49289 106.73 106.51 107.01 0 189 37 7 0 0 0 9.9802E-05 1 66282 79.492 73.833 1 0.61855 0.62618 0 15246000 6933500 8312900 12885 1806 4910 5034 20108 20108 GGFDGEYQDDSLDLLR 16 0 1 Unmodified _GGFDGEYQDDSLDLLR_ 0 0 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.9074 2 900.407763 1798.80097 64853.82 0.74205 0.00066814 0.64127 0.0005774 1.3833 0.0012455 900.407273136939 905.412243073482 106.18 0.51756 106.18 105.95 106.47 -7.6294E-06 154 39 6 0 0 0 3.4041E-06 1 67525 89.301 85.287 1 0.64024 0.638 0 16536000 8594600 7941100 12886 1806 4910 5034 20109 20109 GGFDGEYQDDSLDLLR 16 0 1 Unmodified _GGFDGEYQDDSLDLLR_ 0 0 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 900.4077 2 900.407763 1798.80097 64960.06 0.70871 0.00063812 0.36348 0.00032728 1.0722 0.0009654 900.407665740949 905.412140437086 117.98 0.51433 117.98 117.75 118.26 -7.6294E-06 109 21 7 0 0 0 0.00015602 1 69587 73.881 73.881 1 0.77794 0.66411 0 5693800 3134700 2559000 12887 1806 4910 5034 20110 20110 GGFLYLNR 8 0 1 Unmodified _GGFLYLNR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.2605 2 470.255977 938.497401 NaN NaN NaN 0.12888 6.0605E-05 NaN NaN NaN NaN 76.411 1.3402 76.411 75.547 76.887 0 0 0 0 0.03624 1 44725 55.441 28.577 1 NaN NaN 0 43107000 0 43107000 12888 2103 4911 5035 20111 20111 GGFVPYR 7 0 1 Unmodified _GGFVPYR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 398.2115 2 398.211038 794.407523 96122.49 0.22276 8.8705E-05 0.28241 0.00011246 0.50517 0.00020116 398.210962369095 403.215299771356 46.496 0.86717 46.496 46.084 46.951 0 272 75 6 0 0 0 0.034447 1 25005 62.338 38.543 1 0.89436 0.99262 0 69221000 36811000 32410000 12889 1803 4912 5036 20112 20112 GGFVPYR 7 0 1 Unmodified _GGFVPYR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 398.2108 2 398.211038 794.407523 95065.16 0.337 0.0001342 0.16994 6.7673E-05 0.50694 0.00020187 398.210881694214 403.215256010855 45.527 0.80457 45.527 45.098 45.902 0 270 70 5 0 0 0 0.034932 1 24905 61.997 38.202 1 0.84636 0.96528 0 96571000 56371000 40200000 12890 1803 4912 5036 20113 20113 GGFVPYR 7 0 1 Unmodified _GGFVPYR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 398.2111 2 398.211038 794.407523 95705.38 0.061527 2.4501E-05 -0.51046 -0.00020327 -0.44894 -0.00017877 398.21072348659 403.214824034669 53.178 0.85114 53.178 52.8 53.651 -3.8147E-06 223 64 6 0 0 0 0.047923 1 26352 56.026 42.474 1 1.4763 1.2708 0 7442000 3053100 4388800 12891 1803 4912 5036 20114 20114 GGGAFVQNSQPVAVR 15 0 1 Unmodified _GGGAFVQNSQPVAVR_ 0 0 0 V9HW29;D3DRX6;P33176;B4DS27 V9HW29 V9HW29 HEL-S-61;KIF5B Kinesin-like protein;Kinesin-1 heavy chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.8922 2 743.891689 1485.76882 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.605 1 54.605 54.105 55.105 0 0 0 0 0.0073244 1 30717 69.672 53.781 1 12892 1186 4913 5037 20115 20115 GGGAFVQNSQPVAVR 15 0 1 Unmodified _GGGAFVQNSQPVAVR_ 0 0 0 V9HW29;D3DRX6;P33176;B4DS27 V9HW29 V9HW29 HEL-S-61;KIF5B Kinesin-like protein;Kinesin-1 heavy chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.3968 2 743.891689 1485.76882 NaN NaN NaN 0.78186 0.00058162 NaN NaN NaN NaN 53.629 0.34937 53.629 53.508 53.857 0 0 0 0 0.00044622 1 30671 72.652 52.349 1 NaN NaN 0 5992300 0 5992300 12893 1186 4913 5037 20116 20116 GGGAFVQNSQPVAVR 15 0 1 Unmodified _GGGAFVQNSQPVAVR_ 0 0 0 V9HW29;D3DRX6;P33176;B4DS27 V9HW29 V9HW29 HEL-S-61;KIF5B Kinesin-like protein;Kinesin-1 heavy chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.8926 2 743.891689 1485.76882 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.69 1 53.69 53.19 54.19 3.8147E-06 0 0 0 0.0016453 1 30684 91.549 72.196 1 12894 1186 4913 5037 20117 20117 GGGAFVQNSQPVAVR 15 0 1 Unmodified _GGGAFVQNSQPVAVR_ 0 0 0 V9HW29;D3DRX6;P33176;B4DS27 V9HW29 V9HW29 HEL-S-61;KIF5B Kinesin-like protein;Kinesin-1 heavy chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.8918 2 743.891689 1485.76882 70959.08 0.46437 0.00034544 0.25968 0.00019318 0.72405 0.00053861 744.392888646074 748.896961683732 63.499 0.29728 63.499 63.349 63.647 0 76 26 5 0 0 0 0.0060951 1 32645 54.486 54.486 1 1.5089 1.3107 0 2237200 1100800 1136400 12895 1186 4913 5037 20118 20118 GGGAGGSSVGTGGGGTGGVGGGAGSEDSGDR 31 0 1 Unmodified _GGGAGGSSVGTGGGGTGGVGGGAGSEDSGDR_ 0 0 0 A0A024RCR9;Q06587;B4DVB5;B4DW57 A0A024RCR9 A0A024RCR9 RING1 E3 ubiquitin-protein ligase RING1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1197.5117 2 1197.51106 2393.00756 NaN NaN NaN -0.14804 -0.00017728 NaN NaN NaN NaN 23.596 0.27515 23.596 23.45 23.725 1.9073E-06 0 0 0 4.2231E-39 1 9424 105.96 100.97 1 NaN NaN 0 8101700 8101700 0 12896 369 4914 5038 20119 20119 GGGATGPGGAEPGEDTALLR 20 0 1 Unmodified _GGGATGPGGAEPGEDTALLR_ 0 0 0 Q9UMN6;A0A0G2R4E5 Q9UMN6 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.438 2 891.934479 1781.8544 NaN NaN NaN -0.53801 -0.00047987 NaN NaN NaN NaN 66.646 0.2114 66.646 66.581 66.793 0 0 0 0 0.0011559 1 38525 45.992 33.416 1 NaN NaN 0 3874000 3874000 0 12897 2113 4915 5039 20120 20120 GGGATGPGGAEPGEDTALLR 20 0 1 Unmodified _GGGATGPGGAEPGEDTALLR_ 0 0 0 Q9UMN6;A0A0G2R4E5 Q9UMN6 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 891.9366 2 891.934479 1781.8544 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.503 1 65.503 65.003 66.003 0 0 0 0 0.0025272 1 38651 52.5 42.845 1 12898 2113 4915 5039 20121 20121 GGGEGNVDETGNNPSVSLK 19 1 0 Unmodified _GGGEGNVDETGNNPSVSLK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1;A0A096LNX6 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 919.9339 2 915.926851 1829.83915 64344.63 0.58046 0.00053166 -0.14251 -0.00013053 0.43795 0.00040113 916.42822710718 919.933965926291 45.075 0.48647 45.075 44.827 45.314 0 199 42 7 0 0 0 6.6212E-12 2 24160 103.14 94.624 1 0.85262 0.90233 0 31212000 16357000 14856000 12899 672 4916 5040 20122;20123 20123 GGGEGNVDETGNNPSVSLK 19 1 0 Unmodified _GGGEGNVDETGNNPSVSLK_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1;A0A096LNX6 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.4279 2 915.926851 1829.83915 64123.13 0.75911 0.00069529 -0.25742 -0.00023578 0.50169 0.00045951 916.427805142697 919.933820512679 44.202 0.41614 44.202 43.997 44.413 0 206 38 7 0 0 0 1.6975E-30 2 24032 146.79 131.59 1 0.82773 0.92847 0 55034000 30082000 24952000 12900 672 4916 5040 20124;20125 20125 GGGEQETQELASK 13 1 0 Unmodified _GGGEQETQELASK_ 0 0 0 Q96QR8 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.316 2 667.315145 1332.61574 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.252 1 22.252 21.752 22.752 0 0 0 0 4.5265E-11 1 8379 118.4 86.981 1 12901 1986 4917 5041 20126 20126 GGGEQETQELASK 13 1 0 Unmodified _GGGEQETQELASK_ 0 0 0 Q96QR8 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3154 2 667.315145 1332.61574 NaN NaN NaN -0.8515 -0.00056822 NaN NaN NaN NaN 22.15 0.31103 22.15 21.866 22.177 0 0 0 0 0.0011522 1 8201 77.379 68.847 1 NaN NaN 0 3378600 3378600 0 12902 1986 4917 5041 20127 20127 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR 31 0 1 Unmodified _GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1192.9811 2 1192.47956 2382.94457 NaN NaN NaN -0.23642 -0.00028192 NaN NaN NaN NaN 24.002 0.87877 24.002 23.789 24.668 0 0 0 0 1.2279E-06 1 9700 64.2 44.908 1 NaN NaN 0 722880000 722880000 0 + 12903 1308;1309 4918 5042 20128 20128 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR 31 0 1 Unmodified _GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1192.4796 2 1192.47956 2382.94457 NaN NaN NaN 0.020502 2.4448E-05 NaN NaN NaN NaN 23.778 1.0799 23.778 23.514 24.594 0 0 0 0 0.00032983 1 9471 56.327 43.386 1 NaN NaN 0 788990000 788990000 0 + 12904 1308;1309 4918 5042 20129 20129 GGGGGQDNGLEGLGNDSR 18 0 1 Unmodified _GGGGGQDNGLEGLGNDSR_ 0 0 0 A8KAQ5;A0A024QZD5;P08621;Q9UFS1;B3KPV0 A8KAQ5 A8KAQ5 SNRP70;SNRNP70;DKFZp434N041 U1 small nuclear ribonucleoprotein 70 kDa ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.3742 2 830.369503 1658.72445 NaN NaN NaN -0.06884 -5.7163E-05 NaN NaN NaN NaN 40.606 0.27081 40.606 40.437 40.708 0 0 0 0 1.0369E-12 1 21249 98.942 90.558 1 NaN NaN 0 6117600 0 6117600 12905 17 4919 5043 20130 20130 GGGGNFGPGPGSNFR 15 0 1 Unmodified _GGGGNFGPGPGSNFR_ 0 0 0 P22626;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.322 2 689.318357 1376.62216 73035.18 0.61492 0.00042387 -0.10674 -7.358E-05 0.50817 0.00035029 689.318479925222 694.322339334757 47.702 0.79424 47.702 47.426 48.22 0 371 69 8 0 0 0 1.2234E-05 1 25783 91.313 83.093 1 2.4263 2.8717 0 351250000 107440000 243800000 12906 1508 4920 5044 20131 20131 GGGGNFGPGPGSNFR 15 0 1 Unmodified _GGGGNFGPGPGSNFR_ 0 0 0 P22626;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.3223 2 689.318357 1376.62216 73674.11 0.72855 0.0005022 -0.046805 -3.2264E-05 0.68174 0.00046994 689.318636982761 694.322357131947 46.476 0.677 46.476 46.268 46.945 0 312 55 8 0 0 0 2.0937E-15 1 25583 133.07 133.07 1 2.5557 2.9705 0 374950000 104810000 270140000 12907 1508 4920 5044 20132 20132 GGGGNFGPGPGSNFR 15 0 1 Unmodified _GGGGNFGPGPGSNFR_ 0 0 0 P22626;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.3185 2 689.318357 1376.62216 73658.71 0.53379 0.00036795 -0.14175 -9.7709E-05 0.39205 0.00027024 689.318347760568 694.322280520506 55.038 0.84788 55.038 54.774 55.622 0 317 54 8 0 0 0 7.5758E-06 2 27501 94.82 91.119 1 1.5149 1.2642 0 23243000 9068500 14174000 12908 1508 4920 5044 20133;20134 20134 GGGGNFGPGPGSNFR 15 0 1 Unmodified _GGGGNFGPGPGSNFR_ 0 0 0 P22626;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3182 2 689.318357 1376.62216 72073.63 0.43557 0.00030024 -0.047228 -3.2555E-05 0.38834 0.00026769 689.318386260788 694.322356406296 55.552 0.7753 55.552 55.228 56.004 -3.8147E-06 246 45 8 0 0 0 0.0001089 2 27147 81.92 81.92 1 1.5033 1.2908 0 21406000 8949300 12457000 12909 1508 4920 5044 20135;20136 20136 GGGGYTCQSGSGWDEFTK 18 1 0 Unmodified _GGGGYTCQSGSGWDEFTK_ 0 0 0 P15924;Q4LE79;B4E2A0 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 947.8912 2 947.389047 1892.76354 NaN NaN NaN -0.26437 -0.00025046 NaN NaN NaN NaN 71.149 0.33589 71.149 70.992 71.328 0 0 0 0 0.0065923 1 41433 42.785 37.291 1 NaN NaN 0 3814700 3814700 0 12910 1486 4921 5045 20137 20137 GGGGYTCQSGSGWDEFTK 18 1 0 Unmodified _GGGGYTCQSGSGWDEFTK_ 0 0 0 P15924;Q4LE79;B4E2A0 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.3912 2 947.389047 1892.76354 NaN NaN NaN 0.072922 6.9086E-05 NaN NaN NaN NaN 69.915 0.18047 69.915 69.796 69.976 0 0 0 0 0.0001654 1 41642 65.043 52.063 1 NaN NaN 0 3719900 3719900 0 12911 1486 4921 5045 20138 20138 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 P62249;M0R210;M0R3H0;M0R1M5;M0QX76 P62249 P62249 RPS16 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.3428 2 621.341104 1240.66765 78434.6 0.85415 0.00053072 0.13827 8.5912E-05 0.99242 0.00061663 621.341082490768 626.345423078807 45.391 0.43119 45.391 45.028 45.459 3.8147E-06 209 38 8 0 0 0 5.2144E-08 2 24434 113.66 113.66 1 1.2351 1.4038 0 111510000 50675000 60833000 12912 1636 4922 5046 20139;20140 20140 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 P62249;M0R210;M0R3H0;M0R1M5;M0QX76 P62249 P62249 RPS16 40S ribosomal protein S16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.8997 3 414.563161 1240.66765 NaN NaN NaN 0.80493 0.0003337 NaN NaN NaN NaN 45.398 0.55797 45.398 44.881 45.439 3.8147E-06 0 0 0 0.021836 1 24259 39.179 31.451 1 NaN NaN 0 108690000 0 108690000 12913 1636 4922 5046 20141 20141 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 P62249;M0R210;M0R3H0;M0R1M5;M0QX76 P62249 P62249 RPS16 40S ribosomal protein S16 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.5634 3 414.563161 1240.66765 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.099 1 45.099 44.599 45.599 0 0 0 0 3.7646E-06 1 24276 81.865 63.806 1 12914 1636 4922 5046 20142 20142 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 P62249;M0R210;M0R3H0;M0R1M5;M0QX76 P62249 P62249 RPS16 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.3413 2 621.341104 1240.66765 77018.74 0.81024 0.00050344 -0.23303 -0.00014479 0.57721 0.00035864 621.341219414388 626.345166472288 43.331 0.89433 43.331 42.856 43.75 0 398 72 9 0 0 0 6.5389E-60 2 23436 204.36 185.38 1 1.0247 1.1871 0 287550000 142540000 145000000 12915 1636 4922 5046 20143;20144 20144 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 P62249;M0R210;M0R3H0;M0R1M5;M0QX76 P62249 P62249 RPS16 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.5633 3 414.563161 1240.66765 92099.39 0.54634 0.00022649 -0.29633 -0.00012285 0.25001 0.00010364 414.563153762748 417.899058867736 43.326 0.94903 43.326 43.08 44.029 0 526 77 12 0 0 0 3.8598E-05 2 23499 76.143 67.442 1 1.0168 1.1887 0 600470000 288540000 311930000 12916 1636 4922 5046 20145;20146 20146 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 P62249;M0R210;M0R3H0;M0R1M5;M0QX76 P62249 P62249 RPS16 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 414.563 3 414.563161 1240.66765 91793.02 -0.46063 -0.00019096 0.39753 0.0001648 -0.063101 -2.6159E-05 414.563322555449 417.899401446144 51.499 1.2254 51.499 51.277 52.503 -3.8147E-06 510 98 10 0 0 0 0.00023111 2 25325 47.971 47.971 1 0.87129 0.7494 0 48426000 24833000 23594000 12917 1636 4922 5046 20147;20148 20147 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 P62249;M0R210;M0R3H0;M0R1M5;M0QX76 P62249 P62249 RPS16 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.3409 2 621.341104 1240.66765 80745.93 0.25243 0.00015685 -0.15732 -9.7748E-05 0.095115 5.9099E-05 621.341215900853 626.345157343278 51.5 0.89254 51.5 51.288 52.181 0 336 72 8 0 0 0 0.00018978 2 25463 76.679 76.679 1 0.82252 0.68073 0 19785000 10850000 8935200 12918 1636 4922 5046 20149;20150 20149 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 P62249;M0R210;M0R3H0;M0R1M5;M0QX76 P62249 P62249 RPS16 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 414.563 3 414.563161 1240.66765 92017.98 -0.50722 -0.00021027 0.26024 0.00010788 -0.24698 -0.00010239 414.56330618345 417.89934507188 51.603 0.81472 51.603 51.352 52.167 0 344 56 10 0 0 0 0.00096554 2 24794 40.616 40.616 1 0.86434 0.75414 0 55455000 28444000 27011000 12919 1636 4922 5046 20151;20152 20151 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 P62249;M0R210;M0R3H0;M0R1M5;M0QX76 P62249 P62249 RPS16 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.3411 2 621.341104 1240.66765 77075.41 0.28549 0.00017739 0.083878 5.2117E-05 0.36937 0.00022951 621.341166259425 626.345243674087 51.612 0.62393 51.612 51.374 51.998 0 239 44 9 0 0 0 6.6127E-13 2 24796 133.57 133.57 1 0.81429 0.71033 0 25819000 13628000 12192000 12920 1636 4922 5046 20153;20154 20154 GGGNQVSLLNVVMDLK 16 1 0 Unmodified _GGGNQVSLLNVVMDLK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.9459 2 822.442897 1642.87124 NaN NaN NaN -0.94217 -0.00077488 NaN NaN NaN NaN 128.75 0.18614 128.75 128.61 128.79 0 0 0 0 2.8365E-06 1 83939 84.169 71.213 1 NaN NaN 0 4297700 4297700 0 12921 515 4923 5047 20155 20155 GGGNQVSLLNVVMDLK 16 1 0 Unmodified _GGGNQVSLLNVVMDLK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.4427 2 822.442897 1642.87124 67097.94 0.83245 0.00068464 -0.60751 -0.00049964 0.22494 0.000185 822.442020215797 826.951022406016 128.39 0.25998 128.39 128.2 128.46 0 63 16 6 0 0 0 2.6002E-06 1 85733 91.858 82.203 1 0.4592 0.4809 0 10622000 6672600 3949900 12922 515 4923 5047 20156 20156 GGGNQVSLLNVVMDLK 16 1 0 Oxidation (M) _GGGNQVSLLNVVM(ox)DLK_ GGGNQVSLLNVVM(1)DLK GGGNQVSLLNVVM(112.5)DLK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.4487 2 830.440354 1658.86616 66413.11 1.1802 0.00098011 -0.52018 -0.00043198 0.66005 0.00054813 830.940963644665 834.447097355362 120.07 0.56426 120.07 119.8 120.37 7.6294E-06 323 40 13 0 0 0 1.6263E-10 2 79211 112.5 112.5 1 1.0797 1.2174 0 67273000 29949000 37324000 12923 515 4923 5048 20157;20158 20158 374 GGGNQVSLLNVVMDLK 16 1 0 Oxidation (M) _GGGNQVSLLNVVM(ox)DLK_ GGGNQVSLLNVVM(1)DLK GGGNQVSLLNVVM(53.03)DLK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.4485 2 830.440354 1658.86616 66184.84 0.79871 0.00066328 0.41986 0.00034867 1.2186 0.001012 830.440438257801 834.447739865497 133.73 0.578 133.73 133.42 134 0 75 22 4 0 0 0 0.00016816 1 81510 53.034 49.18 1 1.2635 0.99469 0 11024000 4729100 6295100 12924 515 4923 5048 20159 20159 374 GGGNQVSLLNVVMDLK 16 1 0 Oxidation (M) _GGGNQVSLLNVVM(ox)DLK_ GGGNQVSLLNVVM(1)DLK GGGNQVSLLNVVM(74.54)DLK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 834.4478 2 830.440354 1658.86616 66547.27 1.1833 0.00098265 0.27791 0.00023079 1.4612 0.0012134 830.440136681397 834.447366757904 133.46 0.6252 133.46 133.13 133.76 0 66 24 4 0 0 0 7.573E-05 1 80438 74.537 74.537 1 1.249 1.0321 0 11701000 4961000 6739700 12925 515 4923 5048 20160 20160 374 GGGNQVSLLNVVMDLKK 17 2 0 Unmodified _GGGNQVSLLNVVMDLKK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.673 3 591.329344 1770.9662 79887.11 0.74267 0.00043916 0.33069 0.00019555 1.0734 0.00063471 591.663907176387 596.67253654302 126.65 0.38367 126.65 126.47 126.86 0 48 13 6 0 0 0 0.044134 1 76247 13.425 13.425 1 2.5525 2.2513 0 2534200 900250 1634000 12926 515 4924 5049 20161 20161 GGGNQVSLLNVVMDLKK 17 2 0 Unmodified _GGGNQVSLLNVVMDLKK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.0073 3 591.329344 1770.9662 80241.97 0.62855 0.00037168 0.13336 7.8858E-05 0.7619 0.00045054 591.329294047825 596.672302962663 126.47 0.40865 126.47 126.21 126.61 0 71 16 6 0 0 0 0.042682 1 75152 13.832 13.832 1 1.9311 1.6765 0 2622700 1111800 1510900 12927 515 4924 5049 20162 20162 GGGPAGAGGEAPAALR 16 0 1 Unmodified _GGGPAGAGGEAPAALR_ 0 0 0 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8362 2 654.836382 1307.65821 72944.78 0.73024 0.00047819 0.39574 0.00025914 1.126 0.00073733 654.836667742615 659.8401013945 38.436 0.37812 38.436 38.255 38.633 0 118 31 5 0 0 0 6.1992E-07 2 20140 115.33 95.296 1 0.75837 0.88163 0 59781000 35850000 23932000 12928 1814 4925 5050 20163;20164 20163 GGGPAGAGGEAPAALR 16 0 1 Unmodified _GGGPAGAGGEAPAALR_ 0 0 0 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.8404 2 654.836382 1307.65821 NaN NaN NaN 0.2067 0.00013536 NaN NaN NaN NaN 45.14 0.47615 45.14 44.902 45.378 -3.8147E-06 0 0 0 0.0096798 1 21488 48.513 41.854 1 NaN NaN 0 3807200 0 3807200 12929 1814 4925 5050 20165 20165 GGGPAGAGGEAPAALR 16 0 1 Unmodified _GGGPAGAGGEAPAALR_ 0 0 0 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.8404 2 654.836382 1307.65821 NaN NaN NaN 0.19228 0.00012591 NaN NaN NaN NaN 45.282 0.43871 45.282 45.02 45.459 0 0 0 0 1.5764E-08 1 21003 96.229 69.557 1 NaN NaN 0 3293100 0 3293100 12930 1814 4925 5050 20166 20166 GGGPLILLDLNDENSNQSFHSEGSLQK 27 1 0 Unmodified _GGGPLILLDLNDENSNQSFHSEGSLQK_ 0 0 0 I3L1Q2;Q8WUZ0 I3L1Q2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 960.1442 3 957.136936 2868.38898 60785.26 0.74937 0.00071725 0.11073 0.00010598 0.8601 0.00082324 957.471255047371 960.142417989764 108.99 0.30487 108.99 108.85 109.16 0 49 22 5 0 0 0 0.00026138 2 69859 32.708 27.194 1 0.55206 0.56685 0 17801000 10035000 7765800 12931 1319 4926 5051 20167;20168 20168 GGGPLILLDLNDENSNQSFHSEGSLQK 27 1 0 Unmodified _GGGPLILLDLNDENSNQSFHSEGSLQK_ 0 0 0 I3L1Q2;Q8WUZ0 I3L1Q2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 960.1436 3 957.136936 2868.38898 61803.94 0.50776 0.00048599 0.44218 0.00042323 0.94994 0.00090922 957.471895201228 960.142900936492 120.25 0.35252 120.25 120.08 120.43 -7.6294E-06 115 18 11 0 0 0 4.1773E-08 1 70516 49.25 46.81 1 1.4643 1.1949 0 6214900 2057000 4157900 12932 1319 4926 5051 20169 20169 GGGQIIPTAR 10 0 1 Unmodified _GGGQIIPTAR_ 0 0 0 P13639;Q8TA90;B4DPU3;B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;K7EP67;K7EJ74 P13639;B4DZB1 B4DZB1 EEF2;U5-116KD;EFTUD2;SNRP116 Elongation factor 2;116 kDa U5 small nuclear ribonucleoprotein component MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.2819 2 485.277441 968.540328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.084 1 41.084 40.584 41.584 0 0 0 0 6.4714E-18 1 21581 143.45 107.27 1 12933 794;1478 4927 5052 20170 20170 GGGQIIPTAR 10 0 1 Unmodified _GGGQIIPTAR_ 0 0 0 P13639;Q8TA90;B4DPU3;B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;K7EP67;K7EJ74 P13639;B4DZB1 B4DZB1 EEF2;U5-116KD;EFTUD2;SNRP116 Elongation factor 2;116 kDa U5 small nuclear ribonucleoprotein component ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.2776 2 485.277441 968.540328 NaN NaN NaN 0.37621 0.00018257 NaN NaN NaN NaN 46.682 0.47851 46.682 46.446 46.925 0 0 0 0 0.015561 1 22541 57.59 42.15 1 NaN NaN 0 4936800 4936800 0 12934 794;1478 4927 5052 20171 20171 GGGQIIPTAR 10 0 1 Unmodified _GGGQIIPTAR_ 0 0 0 P13639;Q8TA90;B4DPU3;B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;K7EP67;K7EJ74 P13639;B4DZB1 B4DZB1 EEF2;U5-116KD;EFTUD2;SNRP116 Elongation factor 2;116 kDa U5 small nuclear ribonucleoprotein component MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 490.2812 2 485.277441 968.540328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.573 1 46.573 46.073 47.073 0 0 0 0 6.1697E-06 1 22461 102 88.33 1 12935 794;1478 4927 5052 20172 20172 GGGQLDLLGVSLASLK 16 1 0 Unmodified _GGGQLDLLGVSLASLK_ 0 0 0 E7EXA6;Q96S08;A0A0D9SF58;Q8WVB6;B4DEY3;F8WCC1;H0Y7D3 E7EXA6 E7EXA6 CHTF18;RUVBL Chromosome transmission fidelity protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.4411 2 764.44068 1526.86681 74905.04 0.84009 0.0006422 0.006359 4.8611E-06 0.84645 0.00064706 764.440320530732 768.448089588422 124.81 0.33737 124.81 124.62 124.96 0 72 24 5 0 0 0 0.00015418 1 81071 69.716 69.716 1 1.203 1.2199 0 5941200 2389600 3551600 12936 524 4928 5053 20173 20173 GGGQLDLLGVSLASLK 16 1 0 Unmodified _GGGQLDLLGVSLASLK_ 0 0 0 E7EXA6;Q96S08;A0A0D9SF58;Q8WVB6;B4DEY3;F8WCC1;H0Y7D3 E7EXA6 E7EXA6 CHTF18;RUVBL Chromosome transmission fidelity protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.4412 2 764.44068 1526.86681 73710.99 0.96302 0.00073617 -0.24213 -0.00018509 0.7209 0.00055108 764.942121122807 768.447591339822 124.36 0.33128 124.36 124.19 124.52 -7.6294E-06 67 20 5 0 0 0 0.010895 1 82664 33.204 33.204 1 0.96947 1.0186 0 4381200 2500000 1881200 12937 524 4928 5053 20174 20174 GGGQSVQFTDIETLK 15 1 0 Unmodified _GGGQSVQFTDIETLK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.9108 2 790.401752 1578.78895 70027 0.68823 0.00054398 0.26134 0.00020657 0.94958 0.00075055 790.402276198874 794.408928805632 88.196 0.6054 88.196 87.929 88.535 7.6294E-06 147 47 4 0 0 0 0.011541 1 53052 51.286 37.051 1 0.90106 0.88431 0 20459000 10285000 10174000 12938 1312 4929 5054 20175 20175 GGGQSVQFTDIETLK 15 1 0 Unmodified _GGGQSVQFTDIETLK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.4012 2 790.401752 1578.78895 NaN NaN NaN 0.48956 0.00038695 NaN NaN NaN NaN 101.38 0.53067 101.38 101.12 101.65 -7.6294E-06 0 0 0 0.037664 1 57455 51.013 41.06 1 NaN NaN 0 3605800 3605800 0 12939 1312 4929 5054 20176 20176 GGGQSVQFTDIETLK 15 1 0 Unmodified _GGGQSVQFTDIETLK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 794.4093 2 790.401752 1578.78895 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.46 1 101.46 100.96 101.96 0 0 0 0 0.0040249 1 57499 54.343 43.585 1 12940 1312 4929 5054 20177 20177 GGGSCVLCCGDLEATALGR 19 0 1 Unmodified _GGGSCVLCCGDLEATALGR_ 0 0 0 Q86UK7 Q86UK7 Q86UK7 ZNF598 Zinc finger protein 598 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.9399 2 976.934784 1951.85502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.042 1 93.042 92.542 93.542 7.6294E-06 0 0 0 0.0066142 1 56398 45.79 38.066 1 12941 1884 4930 5055 20178 20178 GGHDILVR 8 0 1 Unmodified _GGHDILVR_ 0 0 0 Q9Y678;B3KW21;Q8WUI6;H0Y8X7 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.75 2 433.745776 865.477 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.369 1 25.369 24.869 25.869 -1.9073E-06 0 0 0 0.038505 1 10983 58.815 15.946 1 12942 2151 4931 5056 20179 20179 GGHMDDGGYSMNFNMSSSR 19 0 1 3 Oxidation (M) _GGHM(ox)DDGGYSM(ox)NFNM(ox)SSSR_ GGHM(1)DDGGYSM(1)NFNM(1)SSSR GGHM(63.46)DDGGYSM(63.46)NFNM(63.46)SSSR 0 3 0 H0Y6E7;H3BT71;P38159;B4E352;Q2VIN3;Q96E39;A0A1B0GUK8 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.5995 3 699.928022 2096.76224 72276.22 0.40071 0.00028047 -0.44824 -0.00031374 -0.047538 -3.3273E-05 700.262371024128 703.598345945328 23.57 0.45984 23.57 23.353 23.813 1.9073E-06 139 21 9 0 0 0 3.4184E-06 1 9344 63.46 63.13 1 2.2727 2.3251 0 32571000 11493000 21078000 12943 1284 4932 5057 20180 20180 979;980;981 GGHMDDGGYSMNFNMSSSR 19 0 1 3 Oxidation (M) _GGHM(ox)DDGGYSM(ox)NFNM(ox)SSSR_ GGHM(1)DDGGYSM(1)NFNM(1)SSSR GGHM(110.77)DDGGYSM(110.77)NFNM(110.77)SSSR 0 3 0 H0Y6E7;H3BT71;P38159;B4E352;Q2VIN3;Q96E39;A0A1B0GUK8 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.2645 3 699.928022 2096.76224 72424.89 0.43883 0.00030715 -0.59759 -0.00041827 -0.15876 -0.00011112 700.262143279159 703.263975973913 23.254 0.47509 23.254 23.039 23.514 0 136 21 9 0 0 0 2.4874E-13 1 9077 110.77 109.74 1 2.3885 2.617 0 31278000 9836500 21441000 12944 1284 4932 5057 20181 20181 979;980;981 GGHPPAIQSLINLLADNR 18 0 1 Unmodified _GGHPPAIQSLINLLADNR_ 0 0 0 Q9HCD5 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.6815 3 629.346274 1885.01699 81623.02 0.86638 0.00054526 -0.40009 -0.00025179 0.4663 0.00029346 629.680299971471 632.682256468947 123.02 0.33508 123.02 122.86 123.19 0 64 26 4 0 0 0 0.00019718 3 79679 42.633 42.633 1 1.1283 1.1906 0 4046500 2409500 1637000 12945 2053 4933 5058 20182;20183;20184 20183 GGIFQPELLSSYK 13 1 0 Unmodified _GGIFQPELLSSYK_ 0 0 0 A8K4P8;Q14146;Q6PCC8 A8K4P8 A8K4P8 URB2 Unhealthy ribosome biogenesis protein 2 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.8847 2 719.882467 1437.75038 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.38 1 106.38 105.88 106.88 -7.6294E-06 0 0 0 0.033854 1 67731 43.512 28.501 1 12946 738 4934 5059 20185 20185 GGIPNVEGAAK 11 1 0 Unmodified _GGIPNVEGAAK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.7747 2 506.774731 1011.53491 NaN NaN NaN -0.85655 -0.00043408 NaN NaN NaN NaN 41.517 0.59602 41.517 41.253 41.849 0 0 0 0 0.0031334 1 21898 67.897 37.285 1 NaN NaN 0 99252000 99252000 0 12947 125 4935 5060 20186 20186 GGIPNVEGAAK 11 1 0 Unmodified _GGIPNVEGAAK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.7746 2 506.774731 1011.53491 NaN NaN NaN 0.039302 1.9917E-05 NaN NaN NaN NaN 40.267 0.59796 40.267 40.079 40.677 0 0 0 0 0.00042695 1 21466 90.657 64.763 1 NaN NaN 0 93162000 93162000 0 12948 125 4935 5060 20187 20187 GGIPNVEGAAK 11 1 0 Unmodified _GGIPNVEGAAK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.7748 2 506.774731 1011.53491 NaN NaN NaN 0.44803 0.00022705 NaN NaN NaN NaN 47.586 0.97986 47.586 47.161 48.141 0 0 0 0 0.037514 1 23072 47.96 29.974 1 NaN NaN 0 4305700 4305700 0 12949 125 4935 5060 20188 20188 GGIQELIGLIK 11 1 0 Unmodified _GGIQELIGLIK_ 0 0 0 P35251 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.8604 2 570.852981 1139.69141 80819.38 0.5109 0.00029165 0.13177 7.522E-05 0.64267 0.00036687 570.85294738529 574.85983918425 122.76 0.60945 122.76 122.47 123.08 0 202 44 7 0 0 0 1.4269E-05 2 79532 107.15 76.08 1 0.45827 0.47388 0 14697000 10146000 4551100 12950 1542 4936 5061 20189;20190 20190 GGIQELIGLIK 11 1 0 Unmodified _GGIQELIGLIK_ 0 0 0 P35251 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.8536 2 570.852981 1139.69141 79889.46 0.8354 0.00047689 -0.2068 -0.00011805 0.6286 0.00035884 570.852894139485 574.859829195158 122.19 0.52032 122.19 121.9 122.42 0 180 37 6 0 0 0 3.837E-05 2 80860 99.802 68.728 1 0.45895 0.4745 0 18514000 12286000 6228100 12951 1542 4936 5061 20191;20192 20191 GGIQELIGLIK 11 1 0 Unmodified _GGIQELIGLIK_ 0 0 0 P35251 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.8536 2 570.852981 1139.69141 81493.83 0.6116 0.00034914 0.41383 0.00023624 1.0254 0.00058537 570.853076323545 574.860203777579 134.54 0.19067 134.54 134.47 134.66 1.5259E-05 21 5 6 0 0 0 0.00045925 2 81328 76.827 45.753 1 0.95582 0.78803 0 10905000 6026900 4878100 12952 1542 4936 5061 20193;20194 20194 GGIVDEGALLR 11 0 1 Unmodified _GGIVDEGALLR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q96RV5 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.3116 2 550.308938 1098.60332 NaN NaN NaN -0.22007 -0.0001211 NaN NaN NaN NaN 82.198 0.77798 82.198 81.811 82.589 0 0 0 0 0.027891 1 48845 50.805 23.068 1 NaN NaN 0 70032000 0 70032000 12953 1382 4937 5062 20195 20195 GGIVDEGALLR 11 0 1 Unmodified _GGIVDEGALLR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q96RV5 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.3127 2 550.308938 1098.60332 NaN NaN NaN -0.46027 -0.00025329 NaN NaN NaN NaN 81.136 0.77877 81.136 80.782 81.561 0 0 0 0 0.0023569 1 49394 75.378 40.021 1 NaN NaN 0 76650000 0 76650000 12954 1382 4937 5062 20196 20196 GGKPEPPAMPQPVPTA 16 1 0 Oxidation (M) _GGKPEPPAM(ox)PQPVPTA_ GGKPEPPAM(1)PQPVPTA GGKPEPPAM(50.21)PQPVPTA 0 1 1 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.4044 2 795.40324 1588.79193 66513.08 0.89075 0.00070851 -0.20971 -0.0001668 0.68105 0.00054171 795.403282927135 799.410176158105 48.578 0.65085 48.578 48.243 48.894 0 387 49 10 0 0 0 0.00034588 2 26343 50.207 50.207 1 1.4654 1.7089 0 268330000 112640000 155700000 12955 1511 4938 5063 20197;20198 20198 1282 GGKPEPPAMPQPVPTA 16 1 0 Oxidation (M) _GGKPEPPAM(ox)PQPVPTA_ GGKPEPPAM(1)PQPVPTA GGKPEPPAM(118.76)PQPVPTA 0 1 1 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.4033 2 795.40324 1588.79193 66918.28 0.80528 0.00064052 -0.32326 -0.00025712 0.48202 0.0003834 795.403243901549 799.410140633287 49.197 0.68832 49.197 48.847 49.535 -3.8147E-06 407 50 10 0 0 0 2.7748E-12 2 26901 118.76 112.1 1 1.4885 1.7258 0 239820000 96222000 143600000 12956 1511 4938 5063 20199;20200 20200 1282 GGKPEPPAMPQPVPTA 16 1 0 Oxidation (M) _GGKPEPPAM(ox)PQPVPTA_ GGKPEPPAM(1)PQPVPTA GGKPEPPAM(68.52)PQPVPTA 0 1 1 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.4055 2 795.40324 1588.79193 66735.69 0.94611 0.00075254 -0.047935 -3.8128E-05 0.89817 0.00071441 795.403438106039 799.410191925238 47.467 0.72857 47.467 47.011 47.74 0 390 54 10 0 0 0 0.00013032 2 26113 68.515 68.515 1 1.547 1.8031 0 254590000 104200000 150390000 12957 1511 4938 5063 20201;20202 20202 1282 GGKPEPPAMPQPVPTA 16 1 0 Oxidation (M) _GGKPEPPAM(ox)PQPVPTA_ GGKPEPPAM(1)PQPVPTA GGKPEPPAM(110.8)PQPVPTA 0 1 1 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.4036 2 795.40324 1588.79193 67538.73 0.70993 0.00056468 -0.26695 -0.00021233 0.44299 0.00035235 795.403220876409 799.41017945695 48.047 0.66267 48.047 47.694 48.357 0 308 47 10 0 0 0 2.8157E-09 2 26706 110.8 104.42 1 1.5008 1.7362 0 203200000 80374000 122820000 12958 1511 4938 5063 20203;20204 20204 1282 GGKPEPPAMPQPVPTA 16 1 0 Oxidation (M) _GGKPEPPAM(ox)PQPVPTA_ GGKPEPPAM(1)PQPVPTA GGKPEPPAM(44.43)PQPVPTA 0 1 1 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.4039 2 795.40324 1588.79193 68025.38 0.66232 0.00052681 -0.077838 -6.1913E-05 0.58448 0.0004649 795.403233626462 799.41035279506 56.871 0.72775 56.871 56.445 57.173 0 279 48 9 0 0 0 0.0013704 1 28659 44.426 44.426 1 0.89953 0.71644 0 9827000 5267700 4559300 12959 1511 4938 5063 20205 20205 1282 GGLASGGDVEPGLPVEVR 18 0 1 Unmodified _GGLASGGDVEPGLPVEVR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 854.949 2 854.946858 1707.87916 NaN NaN NaN 0.37999 0.00032487 NaN NaN NaN NaN 93.955 0.17764 93.955 93.84 94.017 0 0 0 0 0.00028725 1 58345 62.891 52.886 1 NaN NaN 0 5551000 5551000 0 12960 1593 4939 5064 20206 20206 GGLGYVEETSEFEAR 15 0 1 Unmodified _GGLGYVEETSEFEAR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.3854 2 822.381017 1642.74748 65800.05 1.0619 0.00087331 0.33944 0.00027915 1.4014 0.0011525 822.881942232391 827.385872796027 81.467 1.1406 81.467 80.852 81.993 7.6294E-06 289 97 7 0 0 0 3.4872E-58 1 49747 194.17 194.17 1 20.625 23.495 0 105300000 5233800 100060000 12961 2103 4940 5065 20207 20207 GGLGYVEETSEFEAR 15 0 1 Unmodified _GGLGYVEETSEFEAR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.3851 2 822.381017 1642.74748 67357.96 0.9096 0.00074803 -0.16966 -0.00013952 0.73994 0.00060851 822.380038610597 827.385004132157 94.772 1.0075 94.772 94.39 95.398 0 300 69 8 0 0 0 1.1373E-05 2 52907 91.961 89.549 1 27.344 23.529 0 52060000 1522000 50538000 12962 2103 4940 5065 20208;20209 20208 GGLGYVEETSEFEAR 15 0 1 Unmodified _GGLGYVEETSEFEAR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.8868 2 822.381017 1642.74748 NaN NaN NaN -0.074494 -6.1262E-05 NaN NaN NaN NaN 94.726 0.87301 94.726 94.374 95.247 0 0 0 0 1.32E-10 1 52078 113.22 103.54 1 NaN NaN 0 41770000 0 41770000 12963 2103 4940 5065 20210 20210 GGLVSDAYGEDDFSR 15 0 1 Unmodified _GGLVSDAYGEDDFSR_ 0 0 0 J3KS14;F5H478;B7Z4X9;J3KRU5;X6R3T8;J3QLH3;A0A024R8R0;J3QQJ0;Q9UHR5 J3KS14 J3KS14 SAP30BP SAP30-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.3533 2 794.349716 1586.68488 70824.44 0.75132 0.00059681 -0.3548 -0.00028183 0.39653 0.00031498 794.349644142502 799.35328870542 73.91 0.26882 73.91 73.752 74.021 0 44 20 4 0 0 0 0.00022163 2 44344 69.451 61.964 1 1.3676 1.3609 0 7868200 4110200 3758000 12964 255 4941 5066 20211;20212 20211 GGLYSQEQAAK 11 1 0 Unmodified _GGLYSQEQAAK_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.2883 2 576.288202 1150.56185 79692.79 0.27653 0.00015936 0.07821 4.5071E-05 0.35474 0.00020443 576.288196235022 580.295358636995 22.811 1.443 22.811 22.177 23.62 0 254 63 8 0 0 0 0.020718 1 9334 43.635 19.514 1 0.81908 0.92316 0 124450000 67340000 57115000 12965 291 4942 5067 20213 20213 GGMGSGGLATGIAGGLAGMGGIQNEK 26 1 0 2 Oxidation (M) _GGM(ox)GSGGLATGIAGGLAGM(ox)GGIQNEK_ GGM(1)GSGGLATGIAGGLAGM(1)GGIQNEK GGM(120.63)GSGGLATGIAGGLAGM(120.63)GGIQNEK 0 2 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1147.5525 2 1147.04919 2292.08383 56505.07 0.18187 0.00020861 -0.22218 -0.00025485 -0.04031 -4.6238E-05 1147.5509743705 1151.55790826577 85.627 0.82404 85.627 85.237 86.061 7.6294E-06 533 69 11 0 0 0 8.6185E-28 3 51289 120.63 120.63 1 2.0251 2.284 0 111880000 38140000 73743000 12966 316 4943 5068 20214;20215;20216 20216 235;236 GGMGSGGLATGIAGGLAGMGGIQNEK 26 1 0 2 Oxidation (M) _GGM(ox)GSGGLATGIAGGLAGM(ox)GGIQNEK_ GGM(1)GSGGLATGIAGGLAGM(1)GGIQNEK GGM(117.4)GSGGLATGIAGGLAGM(117.4)GGIQNEK 0 2 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1147.0529 2 1147.04919 2292.08383 56368.47 0.24669 0.00028297 -0.41134 -0.00047183 -0.16465 -0.00018886 1147.55069062198 1151.05628384415 84.832 0.76353 84.832 84.477 85.241 0 557 65 12 0 0 0 1.4552E-27 3 51969 117.4 117.4 1 1.9617 2.2172 0 131060000 38371000 92693000 12967 316 4943 5068 20217;20218;20219 20219 235;236 GGNETVQESNALR 13 0 1 Unmodified _GGNETVQESNALR_ 0 0 0 Q05C46 Q05C46 Q05C46 CASC5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.8346 2 687.834037 1373.65352 NaN NaN NaN 0.22669 0.00015593 NaN NaN NaN NaN 28.058 0.24735 28.058 27.923 28.17 -1.9073E-06 0 0 0 0.00058019 1 13150 81.799 60.8 1 NaN NaN 0 4930900 4930900 0 12968 1685 4944 5069 20220 20220 GGNETVQESNALR 13 0 1 Unmodified _GGNETVQESNALR_ 0 0 0 Q05C46 Q05C46 Q05C46 CASC5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.8388 2 687.834037 1373.65352 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.028 1 28.028 27.528 28.528 0 0 0 0 0.001543 1 13129 72.2 50.455 1 12969 1685 4944 5069 20221 20221 GGNETVQESNALR 13 0 1 Unmodified _GGNETVQESNALR_ 0 0 0 Q05C46 Q05C46 Q05C46 CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.8386 2 687.834037 1373.65352 74522.55 0.51299 0.00035285 0.14433 9.9277E-05 0.65732 0.00045213 687.834200043521 692.837883625401 32.315 0.33863 32.315 32.146 32.485 0 64 17 6 0 0 0 0.0019475 1 13417 55.754 47.753 1 1.2758 1.1297 0 2412700 1113100 1299600 12970 1685 4944 5069 20222 20222 GGNFGFGDSR 10 0 1 Unmodified _GGNFGFGDSR_ 0 0 0 P22626;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.2257 2 507.225405 1012.43626 84276.14 0.62343 0.00031622 0.14925 7.5704E-05 0.77268 0.00039192 507.225444083486 512.229576497097 42.651 0.66264 42.651 42.278 42.94 0 256 53 8 0 0 0 0.0037219 1 22598 63.227 58.373 1 2.7005 3.1482 0 192210000 55858000 136350000 12971 1508 4945 5070 20223 20223 GGNFGFGDSR 10 0 1 Unmodified _GGNFGFGDSR_ 0 0 0 P22626;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.2296 2 507.225405 1012.43626 84825.15 0.60625 0.00030751 0.2828 0.00014344 0.88905 0.00045095 507.225471925699 512.229603752659 41.244 1.0268 41.244 40.939 41.966 0 356 88 6 0 0 0 0.0013029 2 22031 74.269 69.853 1 2.511 2.8561 0 117560000 35571000 81986000 12972 1508 4945 5070 20224;20225 20224 GGNFGFGDSR 10 0 1 Unmodified _GGNFGFGDSR_ 0 0 0 P22626;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.2258 2 507.225405 1012.43626 85026.59 0.18829 9.5506E-05 0.41627 0.00021114 0.60456 0.00030665 507.225502143177 512.229712536926 48.064 0.59731 48.064 47.913 48.51 0 159 43 7 0 0 0 0.0017287 1 23384 72.325 69.75 1 1.5224 1.2699 0 23019000 8598000 14421000 12973 1508 4945 5070 20226 20226 GGNLTLLHFLLGLK 14 1 0 Unmodified _GGNLTLLHFLLGLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.7306 2 748.453394 1494.89223 70509.42 0.65386 0.00048939 -0.0295 -2.208E-05 0.62436 0.00046731 748.9547753182 752.460663936762 133.24 0.14368 133.24 133.16 133.3 0 14 3 6 0 0 0 1.7044E-05 1 89415 78.548 78.548 1 1.1011 1.1797 0 37115000 18493000 18622000 12974 1392 4946 5071 20227 20227 GGNRFEPYANPTK 13 1 1 Unmodified _GGNRFEPYANPTK_ 0 0 1 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.8688 2 725.857315 1449.70008 NaN NaN NaN -0.37635 -0.00027318 NaN NaN NaN NaN 31.181 0.23269 31.181 31.134 31.366 0 0 0 0 0.035263 1 15380 67.93 49.15 1 NaN NaN 0 5723000 0 5723000 12975 1599 4947 5072 20228 20228 GGNRFEPYANPTK 13 1 1 Unmodified _GGNRFEPYANPTK_ 0 0 1 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.8575 2 725.857315 1449.70008 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.203 1 31.203 30.703 31.703 0 0 0 0 0.0051051 1 15396 73.499 44.026 1 12976 1599 4947 5072 20229 20229 GGNVFAALIQDQSEEEEEEEK 21 1 0 Unmodified _GGNVFAALIQDQSEEEEEEEK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8;A0PJ72;F5GYK6 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1176.0319 2 1176.0297 2350.04484 NaN NaN NaN 0.8275 0.00097316 NaN NaN NaN NaN 110.19 0.25443 110.19 110 110.26 0 0 0 0 1.0774E-12 1 69092 88.282 75.404 1 NaN NaN 0 11396000 11396000 0 12977 1926 4948 5073 20230 20230 GGNVFAALIQDQSEEEEEEEK 21 1 0 Unmodified _GGNVFAALIQDQSEEEEEEEK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8;A0PJ72;F5GYK6 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1180.5363 2 1176.0297 2350.04484 56726.27 0.015424 1.8139E-05 -0.45737 -0.00053788 -0.44195 -0.00051974 1176.03028481983 1180.03685358838 109.58 0.34436 109.58 109.4 109.75 0 90 23 6 0 0 0 5.3059E-07 2 70339 58.487 58.487 1 1.12 1.1446 0 17324000 8343800 8980000 12978 1926 4948 5073 20231;20232 20231 GGPAEGQLQENDR 13 0 1 Unmodified _GGPAEGQLQENDR_ 0 0 0 A0A087X0K9;Q6MZU1;G5E9E7;A9CQZ8;G3V1L9;Q07157;H0YLT6;H0YKB1 A0A087X0K9 A0A087X0K9 TJP1;DKFZp686A1195 Tight junction protein ZO-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.8171 2 685.818387 1369.62222 75413.08 0.57799 0.0003964 -0.31814 -0.00021819 0.25985 0.00017821 685.818650151384 690.82261490371 22.183 0.29416 22.183 22.04 22.335 -1.9073E-06 39 16 4 0 0 0 0.00084224 1 8356 60.255 55.839 1 1.3003 1.3754 0 3939300 1556800 2382400 12979 444 4949 5074 20233 20233 GGPAEGQLQENDR 13 0 1 Unmodified _GGPAEGQLQENDR_ 0 0 0 A0A087X0K9;Q6MZU1;G5E9E7;A9CQZ8;G3V1L9;Q07157;H0YLT6;H0YKB1 A0A087X0K9 A0A087X0K9 TJP1;DKFZp686A1195 Tight junction protein ZO-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.8176 2 685.818387 1369.62222 78989.64 0.42676 0.00029268 -1.2592 -0.00086361 -0.83247 -0.00057092 686.319349058941 691.322192178576 22.092 0.28094 22.092 21.915 22.196 0 33 12 4 0 0 0 6.2579E-06 1 8159 104.79 95.932 1 1.9716 1.9603 0 7603100 2846000 4757100 12980 444 4949 5074 20234 20234 GGPASPGGLQGLETR 15 0 1 Unmodified _GGPASPGGLQGLETR_ 0 0 0 C9JWC4;Q8NCD3 C9JWC4 C9JWC4 HJURP Holliday junction recognition protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.8669 2 698.862597 1395.71064 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.201 1 58.201 57.701 58.701 0 0 0 0 0.00037777 1 33787 81.625 63.313 1 12981 1143 4950 5075 20235 20235 GGPEFSSALK 10 1 0 Unmodified _GGPEFSSALK_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.7635 2 496.756007 991.497461 85880.17 0.35232 0.00017502 0.1733 8.6088E-05 0.52562 0.0002611 496.75599337153 500.763156364115 50.712 0.51722 50.712 50.449 50.967 0 227 49 8 0 0 0 0.00017611 2 27944 94.85 76.814 1 0.90455 1.0525 0 256970000 132330000 124630000 12982 2080 4951 5076 20236;20237 20237 GGPEFSSALK 10 1 0 Unmodified _GGPEFSSALK_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.7559 2 496.756007 991.497461 84129.96 0.12472 6.1956E-05 0.34908 0.00017341 0.47381 0.00023537 496.756063554851 500.763224362911 49.444 0.67548 49.444 49.003 49.679 0 231 56 8 0 0 0 0.0022794 2 27741 69.812 51.081 1 0.93013 1.0861 0 274450000 150180000 124280000 12983 2080 4951 5076 20238;20239 20238 GGPEFSSALK 10 1 0 Unmodified _GGPEFSSALK_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.7632 2 496.756007 991.497461 85222.17 0.28566 0.0001419 0.048182 2.3935E-05 0.33384 0.00016584 496.755944887603 500.763075545556 58.174 0.83575 58.174 57.949 58.785 0 242 63 7 0 0 0 0.016025 2 29497 48.423 29.693 1 1.5951 1.293 0 25116000 9597400 15519000 12984 2080 4951 5076 20240;20241 20241 GGPEFSSALK 10 1 0 Unmodified _GGPEFSSALK_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.7634 2 496.756007 991.497461 85674.6 0.063091 3.1341E-05 0.099717 4.9535E-05 0.16281 8.0876E-05 496.7559218155 500.763102623097 58.551 0.78447 58.551 58.247 59.031 -3.8147E-06 246 62 7 0 0 0 0.0032844 2 29075 65.224 46.494 1 1.6172 1.2951 0 21653000 9002400 12650000 12985 2080 4951 5076 20242;20243 20243 GGPLQALTR 9 0 1 Unmodified _GGPLQALTR_ 0 0 0 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.7666 2 456.766709 911.518865 88623.85 0.12831 5.8606E-05 0.0076021 3.4724E-06 0.13591 6.2079E-05 456.766678645153 461.770698779879 59.101 0.65939 59.101 58.804 59.463 3.8147E-06 245 51 6 0 0 0 0.00067697 1 33666 95.909 65.297 1 0.93234 1.031 0 58844000 29888000 28956000 12986 334 4952 5077 20244 20244 GGPLQALTR 9 0 1 Unmodified _GGPLQALTR_ 0 0 0 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.7669 2 456.766709 911.518865 88307.85 0.11566 5.2829E-05 0.0036648 1.674E-06 0.11932 5.4503E-05 456.766672453355 461.770677501682 58.018 0.61479 58.018 57.685 58.3 0 237 48 6 0 0 0 0.0067422 1 33711 63.419 45.433 1 0.91526 1.0565 0 55437000 28715000 26722000 12987 334 4952 5077 20245 20245 GGPLQALTR 9 0 1 Unmodified _GGPLQALTR_ 0 0 0 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 461.7708 2 456.766709 911.518865 89303.1 -0.036551 -1.6695E-05 0.14743 6.7341E-05 0.11088 5.0646E-05 456.766662764744 461.770762312305 68.154 0.83929 68.154 67.699 68.538 7.6294E-06 294 62 6 0 0 0 0.019545 1 34647 51.066 29.766 1 1.0053 0.83405 0 5270800 2735900 2534900 12988 334 4952 5077 20246 20246 GGPNIITLADIVK 13 1 0 Unmodified _GGPNIITLADIVK_ 0 0 0 Q2I0Y7;E7EU96;B5BUH5;B2R6D7;Q5U5J2;Q8NEV1;P68400 Q2I0Y7 Q2I0Y7 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8882 2 655.887552 1309.76055 76136.03 1.0938 0.00071744 0.0070845 4.6466E-06 1.1009 0.00072208 655.887371013396 659.894703795881 119.33 0.56315 119.33 119.08 119.64 0 162 36 6 0 0 0 1.2205E-08 2 76717 112.83 94.572 1 1.2811 1.3217 0 17297000 7668200 9629100 12989 840 4953 5078 20247;20248 20248 GGPNIITLADIVK 13 1 0 Unmodified _GGPNIITLADIVK_ 0 0 0 Q2I0Y7;E7EU96;B5BUH5;B2R6D7;Q5U5J2;Q8NEV1;P68400 Q2I0Y7 Q2I0Y7 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.8878 2 655.887552 1309.76055 76466.84 0.78286 0.00051347 0.0011407 7.4819E-07 0.784 0.00051422 655.887327601346 659.894661298189 118.79 0.47421 118.79 118.57 119.04 0 136 29 6 0 0 0 6.235E-06 2 78215 104.82 83.852 1 1.3375 1.4162 0 23538000 8932300 14605000 12990 840 4953 5078 20249;20250 20250 GGPNIITLADIVK 13 1 0 Unmodified _GGPNIITLADIVK_ 0 0 0 Q2I0Y7;E7EU96;B5BUH5;B2R6D7;Q5U5J2;Q8NEV1;P68400 Q2I0Y7 Q2I0Y7 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.8956 2 655.887552 1309.76055 76818.36 0.99984 0.00065579 -0.1222 -8.015E-05 0.87764 0.00057564 655.887335752321 659.894443549644 131.98 0.39313 131.98 131.79 132.19 1.5259E-05 85 18 6 0 0 0 0.0081175 2 80253 44.299 44.299 1 0.67116 0.545 0 2710500 1674500 1036000 12991 840 4953 5078 20251;20252 20251 GGPNIITLADIVK 13 1 0 Unmodified _GGPNIITLADIVK_ 0 0 0 Q2I0Y7;E7EU96;B5BUH5;B2R6D7;Q5U5J2;Q8NEV1;P68400 Q2I0Y7 Q2I0Y7 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 660.3966 2 655.887552 1309.76055 76361.55 1.0604 0.00069553 0.30848 0.00020233 1.3689 0.00089786 655.887686823132 659.894750720458 131.76 0.44435 131.76 131.5 131.95 0 68 15 6 0 0 0 0.0018318 2 79115 56.225 50.444 1 0.53866 0.43114 0 3058900 2157900 901060 12992 840 4953 5078 20253;20254 20254 GGPPFAFVEFEDPR 14 0 1 Unmodified _GGPPFAFVEFEDPR_ 0 0 0 J3KTL2;Q07955;Q59FA2;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.3804 2 782.875173 1563.73579 69082.79 0.79822 0.0006249 -0.67734 -0.00053028 0.12087 9.4627E-05 782.875090275413 787.879196191743 116.06 1.0361 116.06 115.66 116.7 0 385 67 10 0 0 0 0.00011089 3 73777 83.397 77.293 1 1.1815 1.3155 0 79760000 35170000 44590000 12993 1333 4954 5079 20255;20256;20257 20255 GGPPFAFVEFEDPR 14 0 1 Unmodified _GGPPFAFVEFEDPR_ 0 0 0 J3KTL2;Q07955;Q59FA2;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.3807 2 782.875173 1563.73579 68866.2 0.88681 0.00069426 -0.83393 -0.00065287 0.052879 4.1398E-05 783.375316571594 787.879210515732 115.44 1.0354 115.44 115.11 116.14 0 320 67 9 0 0 0 0.0001464 1 75171 77.379 62.113 1 1.0867 1.2397 0 94970000 36819000 58152000 12994 1333 4954 5079 20258 20258 GGPPFAFVEFEDPR 14 0 1 Unmodified _GGPPFAFVEFEDPR_ 0 0 0 J3KTL2;Q07955;Q59FA2;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.8754 2 782.875173 1563.73579 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.29 1 115.29 114.79 115.79 0 0 0 0 0.00090064 1 75185 78.342 58.745 1 12995 1333 4954 5079 20259 20259 GGPPFAFVEFEDPR 14 0 1 Unmodified _GGPPFAFVEFEDPR_ 0 0 0 J3KTL2;Q07955;Q59FA2;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 788.382 2 782.875173 1563.73579 68465.87 0.68281 0.00053455 0.19559 0.00015312 0.87839 0.00068767 782.875362578748 787.879778754721 127.47 0.76962 127.47 127.04 127.81 0 163 30 8 0 0 0 0.00015258 3 76792 76.332 69.444 1 0.6653 0.5603 0 4612000 2754200 1857800 12996 1333 4954 5079 20260;20261;20262 20262 GGPPFAFVEFEDPR 14 0 1 Unmodified _GGPPFAFVEFEDPR_ 0 0 0 J3KTL2;Q07955;Q59FA2;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.377 2 782.875173 1563.73579 69101.67 0.69117 0.0005411 -0.078242 -6.1254E-05 0.61293 0.00047985 782.875331578381 788.380740625362 127.26 0.7276 127.26 126.95 127.68 7.6294E-06 168 30 8 0 0 0 0.00018967 1 75653 70.808 64.568 1 0.71111 0.5933 0 6543100 3843500 2699500 12997 1333 4954 5079 20263 20263 GGPPFAFVEFEDPRDAEDAVYGR 23 0 2 Unmodified _GGPPFAFVEFEDPRDAEDAVYGR_ 0 0 1 J3KTL2;Q07955;Q59FA2 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.062 3 847.727549 2540.16082 66028.73 1.0228 0.00086704 -0.2427 -0.00020574 0.78008 0.0006613 848.061664276927 854.733849948852 117.01 0.95672 117.01 116.64 117.6 7.6294E-06 583 68 13 0 0 0 3.9451E-12 2 74655 89.028 89.028 1 1.2341 1.3484 0 240730000 101730000 139000000 12998 1333 4955 5080 20264;20265 20264 GGPPFAFVEFEDPRDAEDAVYGR 23 0 2 Unmodified _GGPPFAFVEFEDPRDAEDAVYGR_ 0 0 1 J3KTL2;Q07955;Q59FA2 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.727 3 847.727549 2540.16082 66036.52 0.78057 0.00066171 0.090346 7.6588E-05 0.87092 0.0007383 848.061944457242 854.734094413487 116.5 0.91077 116.5 116.14 117.05 0 487 56 12 0 0 0 6.9406E-09 2 76029 65.25 65.25 1 1.308 1.5804 0 395180000 165290000 229880000 12999 1333 4955 5080 20266;20267 20267 GGPPFAFVEFEDPRDAEDAVYGR 23 0 2 Unmodified _GGPPFAFVEFEDPRDAEDAVYGR_ 0 0 1 J3KTL2;Q07955;Q59FA2 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.0622 3 847.727549 2540.16082 65693.73 1.2049 0.0010214 -0.11587 -9.823E-05 1.089 0.00092319 848.061696822446 854.733920307075 128.23 0.92542 128.23 127.86 128.78 1.5259E-05 342 38 13 0 0 0 0.00012491 2 77237 36.312 36.312 1 0.7502 0.60525 0 58213000 33383000 24829000 13000 1333 4955 5080 20268;20269 20269 GGPPFAFVEFEDPRDAEDAVYGR 23 0 2 Unmodified _GGPPFAFVEFEDPRDAEDAVYGR_ 0 0 1 J3KTL2;Q07955;Q59FA2 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.4001 3 847.727549 2540.16082 65900.91 0.83617 0.00070885 0.15359 0.00013021 0.98977 0.00083905 848.061974900333 854.399794436248 127.98 0.87074 127.98 127.65 128.52 -7.6294E-06 321 35 12 0 0 0 0.001746 2 76185 26.84 26.84 1 0.75485 0.71202 0 71358000 43381000 27978000 13001 1333 4955 5080 20270;20271 20270 GGPTVDPEELFR 12 0 1 Unmodified _GGPTVDPEELFR_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8316 2 658.827692 1315.64083 73557.15 0.77235 0.00050885 0.27246 0.0001795 1.0448 0.00068835 658.827976323736 663.831576878956 101.4 0.73671 101.4 101.04 101.77 -7.6294E-06 236 57 6 0 0 0 0.00019859 3 62201 74.533 74.533 1 1.5454 1.6095 0 21741000 7933900 13807000 13002 1786 4956 5081 20272;20273;20274 20274 GGPTVDPEELFR 12 0 1 Unmodified _GGPTVDPEELFR_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8318 2 658.827692 1315.64083 73772.8 0.64646 0.00042591 0.063695 4.1964E-05 0.71016 0.00046787 658.827983001748 663.831466509122 100.55 0.86182 100.55 100.21 101.07 0 226 59 5 0 0 0 0.00018015 2 63162 91.095 91.095 1 1.5867 1.7084 0 25818000 8077300 17740000 13003 1786 4956 5081 20275;20276 20275 GGPTVDPEELFR 12 0 1 Unmodified _GGPTVDPEELFR_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.8289 2 658.827692 1315.64083 73708.34 1.1206 0.00073827 0.20063 0.00013218 1.3212 0.00087045 658.827363276392 663.831390471114 113.62 0.65012 113.62 113.43 114.08 -7.6294E-06 118 27 7 0 0 0 0.00076176 1 66220 66.19 66.19 1 1.0581 0.90979 0 6729600 3456400 3273100 13004 1786 4956 5081 20277 20277 GGPTVDPEELFR 12 0 1 Unmodified _GGPTVDPEELFR_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.8289 2 658.827692 1315.64083 72940.97 0.6939 0.00045716 0.43719 0.00028803 1.1311 0.00074519 658.828047173295 663.831310298199 113.52 0.89793 113.52 113.18 114.08 7.6294E-06 111 25 6 0 0 0 0.016702 2 65154 42.001 42.001 1 1.0596 0.88401 0 6549500 3076400 3473100 13005 1786 4956 5081 20278;20279 20278 GGQLLVSLK 9 1 0 Unmodified _GGQLLVSLK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.7955 2 457.78711 913.559667 87944.53 0.84705 0.00038777 1.3938 0.00063805 2.2408 0.0010258 457.787046821532 461.795003013602 71.792 0.30965 71.792 71.602 71.912 0 105 25 6 0 0 0 2.2298E-05 2 43066 116.25 84.961 1 0.8913 1.0034 0 70195000 38453000 31742000 13006 1936 4957 5082 20280;20281 20281 GGQQALLQHWSEYIK 15 1 0 Unmodified _GGQQALLQHWSEYIK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.9714 3 586.637166 1756.88967 78973.91 0.66565 0.0003905 0.22015 0.00012915 0.8858 0.00051965 586.636965093881 589.308486472085 109.95 0.3948 109.95 109.74 110.14 0 108 19 9 0 0 0 0.007357 1 63397 29.733 23.829 1 0.98331 0.78919 0 8078400 3957700 4120700 13007 1718 4958 5083 20282 20282 GGQQALLQHWSEYIK 15 1 0 Unmodified _GGQQALLQHWSEYIK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.9716 3 586.637166 1756.88967 77846.24 0.68675 0.00040287 0.066584 3.9061E-05 0.75333 0.00044193 586.636846551293 589.643113087869 109.73 0.40047 109.73 109.53 109.93 0 101 19 9 0 0 0 0.005273 2 62350 32.341 32.341 1 0.97037 0.79341 0 8286300 4576000 3710300 13008 1718 4958 5083 20283;20284 20284 GGQQALLQHWSEYIK 15 1 0 Unmodified _GGQQALLQHWSEYIK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 883.4608 2 879.452111 1756.88967 66279.68 0.43055 0.00037865 0.08363 7.3549E-05 0.51418 0.0004522 879.452453950873 883.960532729713 109.72 0.32658 109.72 109.55 109.88 7.6294E-06 67 15 6 0 0 0 0.023023 2 62393 41.242 35.749 1 0.86264 0.68199 0 3941800 2096500 1845400 13009 1718 4958 5083 20285;20286 20286 GGQTHLGLPVFNTVK 15 1 0 Unmodified _GGQTHLGLPVFNTVK_ 0 0 0 Q6IAL5;B2R8A1;A8K4W7;P53597;B7Z438 Q6IAL5 Q6IAL5 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.2966 3 523.291219 1566.85183 83675.81 0.58445 0.00030584 -0.28446 -0.00014885 0.29999 0.00015698 523.625282461512 526.296477779706 85.656 0.65647 85.656 85.292 85.948 0 160 49 6 0 0 0 0.021942 1 52602 22.196 22.196 1 2.297 2.4585 0 37008000 10449000 26559000 13010 743 4959 5084 20287 20287 GGRPNEIEPPPPEMPPWQK 19 1 1 Oxidation (M) _GGRPNEIEPPPPEM(ox)PPWQK_ GGRPNEIEPPPPEM(1)PPWQK GGRPNEIEPPPPEM(53.28)PPWQK 0 1 1 I6L9E8;Q8NCA5;B4DT23;B4DY25;B3KTW4 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.0227 3 724.689601 2171.04697 71964.03 0.59987 0.00043472 -0.22558 -0.00016348 0.37429 0.00027124 725.023776805023 731.031368782765 68.33 0.76062 68.33 67.965 68.726 0 228 66 5 0 0 0 8.8646E-06 2 39540 53.278 49.837 1 1.0802 1.1823 0 16926000 6953500 9972000 13011 1324 4960 5085 20288;20289 20288 1001 GGRPNEIEPPPPEMPPWQK 19 1 1 Oxidation (M) _GGRPNEIEPPPPEM(ox)PPWQK_ GGRPNEIEPPPPEM(1)PPWQK GGRPNEIEPPPPEM(54.37)PPWQK 0 1 1 I6L9E8;Q8NCA5;B4DT23;B4DY25;B3KTW4 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.6898 3 724.689601 2171.04697 71246.3 0.48357 0.00035043 0.98514 0.00071392 1.4687 0.0010644 724.689486421094 731.368903654326 67.013 0.7049 67.013 66.681 67.386 0 264 59 7 0 0 0 8.3725E-06 3 39554 54.368 50.82 1 1.1666 1.3379 0 23773000 9340300 14433000 13012 1324 4960 5085 20290;20291;20292 20292 1001 GGSDDSSKDPIDVNYEK 17 2 0 Unmodified _GGSDDSSKDPIDVNYEK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.2745 3 609.274399 1824.80137 77606.22 0.78347 0.00047735 -0.20069 -0.00012227 0.58278 0.00035507 609.274234362732 614.617116607044 41.582 0.56393 41.582 41.342 41.906 0 259 47 8 0 0 0 3.0312E-05 1 21967 66.12 64.386 1 0.65069 0.77047 0 29491000 16801000 12690000 13013 139 4961 5086 20293 20293 GGSDDSSKDPIDVNYEK 17 2 0 Unmodified _GGSDDSSKDPIDVNYEK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 913.4068 2 913.40796 1824.80137 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.56 1 41.56 41.06 42.06 0 0 0 0 0.0014325 1 21924 68.809 47.178 1 13014 139 4961 5086 20294 20294 GGSDDSSKDPIDVNYEK 17 2 0 Unmodified _GGSDDSSKDPIDVNYEK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.6177 3 609.274399 1824.80137 77920.03 0.51364 0.00031295 0.17352 0.00010572 0.68716 0.00041867 609.274378071506 614.617224786811 40.755 0.46479 40.755 40.515 40.979 0 167 33 7 0 0 0 1.2066E-09 3 21815 96.143 92.302 1 0.73216 0.84728 0 44163000 25746000 18417000 13015 139 4961 5086 20295;20296;20297 20295 GGSDDSSKDPIDVNYEK 17 2 0 Unmodified _GGSDDSSKDPIDVNYEK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.4077 2 913.40796 1824.80137 64402.54 0.58334 0.00053282 -0.19739 -0.0001803 0.38594 0.00035252 913.407195298831 921.422533057362 40.748 0.26479 40.748 40.618 40.883 0 47 17 4 0 0 0 0.00018202 1 21867 80.96 77.196 1 1.1372 1.3004 0 16610000 8989500 7620500 13016 139 4961 5086 20298 20298 GGSDDSSKDPIDVNYEK 17 2 0 Unmodified _GGSDDSSKDPIDVNYEK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.6174 3 609.274399 1824.80137 77377.97 0.22005 0.00013407 0.025733 1.5679E-05 0.24579 0.00014975 609.274387123624 614.617217238258 48.451 0.65775 48.451 48.141 48.799 0 373 51 10 0 0 0 0.00025752 1 23494 34.174 34.174 1 1.1149 0.94736 0 38389000 18834000 19555000 13017 139 4961 5086 20299 20299 GGSDDSSKDPIDVNYEK 17 2 0 Unmodified _GGSDDSSKDPIDVNYEK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.6172 3 609.274399 1824.80137 77207.83 0.17788 0.00010838 0.13865 8.4474E-05 0.31652 0.00019285 609.274474977137 614.617249466691 48.837 0.69681 48.837 48.534 49.231 -3.8147E-06 370 55 10 0 0 0 0.0089504 1 23115 25.158 25.158 1 1.1467 0.97527 0 33458000 16093000 17366000 13018 139 4961 5086 20300 20300 GGSGGGGSISGGGYGSGGGSGGR 23 0 1 Unmodified _GGSGGGGSISGGGYGSGGGSGGR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.3778 2 871.37786 1740.74117 NaN NaN NaN -0.023728 -2.0676E-05 NaN NaN NaN NaN 19.876 0.27565 19.876 19.768 20.043 0 0 0 0 2.7545E-24 1 6383 111.78 101.67 1 NaN NaN 0 8471900 8471900 0 + 13019 1166 4962 5087 20301 20301 GGSGGGGSISGGGYGSGGGSGGR 23 0 1 Unmodified _GGSGGGGSISGGGYGSGGGSGGR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 871.3792 2 871.37786 1740.74117 NaN NaN NaN 0.24115 0.00021013 NaN NaN NaN NaN 21.637 0.44784 21.637 21.442 21.889 0 0 0 0 0.010307 1 6583 30.536 29.285 1 NaN NaN 0 6574100 6574100 0 + 13020 1166 4962 5087 20302 20302 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK 40 1 0 Unmodified _GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1075.7659 3 1075.09871 3222.2743 NaN NaN NaN -0.028967 -3.1143E-05 NaN NaN NaN NaN 28.818 1.0123 28.818 28.39 29.403 0 0 0 0 5.0883E-05 1 14120 39.054 39.054 1 NaN NaN 0 236490000 236490000 0 + 13021 1165 4963 5088 20303 20303 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK 40 1 0 Unmodified _GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1075.7668 3 1075.09871 3222.2743 NaN NaN NaN -0.13277 -0.00014275 NaN NaN NaN NaN 28.045 0.86706 28.045 27.757 28.624 0 0 0 0 1.5967E-96 2 13130 147.51 146.81 1 NaN NaN 0 343450000 343450000 0 + 13022 1165 4963 5088 20304;20305 20304 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK 40 1 0 Unmodified _GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1075.7653 3 1075.09871 3222.2743 NaN NaN NaN -0.26945 -0.00028968 NaN NaN NaN NaN 34.814 1.2787 34.814 34.536 35.815 0 0 0 0 1.0416E-08 1 15252 42.761 42.666 1 NaN NaN 0 101820000 101820000 0 + 13023 1165 4963 5088 20306 20306 GGSGGSYGGGGSGGGYGGGSGSR 23 0 1 Unmodified _GGSGGSYGGGGSGGGYGGGSGSR_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.3675 2 896.367492 1790.72043 NaN NaN NaN 0.24145 0.00021643 NaN NaN NaN NaN 16.971 0.36711 16.971 16.858 17.225 0 0 0 0 1.6304E-75 1 4185 173.28 69.891 1 NaN NaN 0 9886900 9886900 0 + 13024 1165 4964 5089 20307 20307 GGSISVQVNSIK 12 1 0 Unmodified _GGSISVQVNSIK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.8408 2 594.832777 1187.651 80398.7 0.5493 0.00032674 -0.46592 -0.00027714 0.083384 4.9599E-05 594.83261490493 598.839466280946 59.105 0.43614 59.105 58.941 59.377 0 133 34 5 0 0 0 0.0034382 1 33740 56.043 47.887 1 1.6705 1.6435 0 19897000 7857100 12040000 13025 468 4965 5090 20308 20308 GGSPAVTLLISEK 13 1 0 Unmodified _GGSPAVTLLISEK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.8724 2 636.36391 1270.71327 77203.58 0.92405 0.00058803 0.072901 4.6392E-05 0.99695 0.00063442 636.364027328843 640.370999817675 92.928 0.75089 92.928 92.578 93.329 7.6294E-06 297 65 6 0 0 0 0.00012689 3 56167 78.653 67.823 1 1.4035 1.5148 0 41929000 18850000 23079000 13026 1914 4966 5091 20309;20310;20311 20309 GGSPAVTLLISEK 13 1 0 Unmodified _GGSPAVTLLISEK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3644 2 636.36391 1270.71327 78671.68 0.85303 0.00054284 0.37854 0.00024089 1.2316 0.00078373 636.36433223174 640.371185304039 91.949 0.68141 91.949 91.666 92.347 0 314 59 8 0 0 0 0.00011234 1 56908 74.76 57.324 1 1.3093 1.4706 0 74836000 30770000 44066000 13027 1914 4966 5091 20312 20312 GGSPAVTLLISEK 13 1 0 Unmodified _GGSPAVTLLISEK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.3638 2 636.36391 1270.71327 76026.62 0.63621 0.00040486 0.23714 0.0001509 0.87334 0.00055576 636.36394210393 640.370996580501 106.43 0.7675 106.43 106.1 106.87 0 265 43 11 0 0 0 0.00021605 2 60774 69.721 59.489 1 1.7466 1.4401 0 41542000 14058000 27484000 13028 1914 4966 5091 20313;20314 20314 GGSPAVTLLISEK 13 1 0 Unmodified _GGSPAVTLLISEK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8665 2 636.36391 1270.71327 76465.37 0.66575 0.00042366 0.17813 0.00011335 0.84388 0.00053702 636.363875648127 640.371001384225 106.23 0.68943 106.23 105.88 106.57 0 261 40 11 0 0 0 9.654E-05 2 59711 92.866 82.634 1 1.7333 1.4572 0 50651000 17469000 33182000 13029 1914 4966 5091 20315;20316 20316 GGSTTGSQFLEQFK 14 1 0 Unmodified _GGSTTGSQFLEQFK_ 0 0 0 B4DZJ6;B4DYY5;F8W726;Q14157 B4DZJ6 B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.8713 2 743.862263 1485.70997 NaN NaN NaN -0.32886 -0.00024462 NaN NaN NaN NaN 84.318 0.49258 84.318 84.007 84.499 0 0 0 0 0.00030436 1 50450 81.017 66.859 1 NaN NaN 0 11957000 0 11957000 13030 1052 4967 5092 20317 20317 GGSTTGSQFLEQFK 14 1 0 Unmodified _GGSTTGSQFLEQFK_ 0 0 0 B4DZJ6;B4DYY5;F8W726;Q14157 B4DZJ6 B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.8707 2 743.862263 1485.70997 69468.2 0.5778 0.0004298 0.82862 0.00061638 1.4064 0.0010462 744.363855141624 747.869997636494 83.103 0.57961 83.103 82.869 83.449 -7.6294E-06 122 43 5 0 0 0 2.6626E-06 3 50942 104.82 90.133 1 2.2724 2.4085 0 20358000 6842300 13516000 13031 1052 4967 5092 20318;20319;20320 20320 GGSWIQEINVAEK 13 1 0 Unmodified _GGSWIQEINVAEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.8674 2 715.867348 1429.72014 69494.57 1.1418 0.00081738 -0.46575 -0.00033342 0.67605 0.00048397 715.867046346165 719.874179463421 93.25 0.71777 93.25 92.841 93.559 0 282 60 7 0 0 0 0.00097639 1 56457 73.435 59.228 1 0.65685 0.6484 0 25200000 14265000 10935000 13032 1665 4968 5093 20321 20321 GGSWIQEINVAEK 13 1 0 Unmodified _GGSWIQEINVAEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.8679 2 715.867348 1429.72014 71800.73 0.77887 0.00055757 -0.57203 -0.0004095 0.20684 0.00014807 715.866921958876 719.873971222662 92.473 0.61575 92.473 92.074 92.69 0 220 51 6 0 0 0 0.0003204 2 57221 79.974 49.72 1 0.61108 0.62884 0 32402000 15816000 16586000 13033 1665 4968 5093 20322;20323 20323 GGTILAPTVSAK 12 1 0 Unmodified _GGTILAPTVSAK_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.8342 2 557.826963 1113.63937 NaN NaN NaN -0.23685 -0.00013212 NaN NaN NaN NaN 59.331 0.45581 59.331 59.059 59.515 0 0 0 0 0.0089727 1 33738 55.721 18.377 1 NaN NaN 0 8593300 0 8593300 13034 511 4969 5094 20324 20324 GGTLQIQLAK 10 1 0 Unmodified _GGTLQIQLAK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9;A0A0A0MSJ1;F5H8B8;F5H797;F5H692;F5H532;F5H0I5;Q7Z607;F5H7D5 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.8158 2 514.808574 1027.60259 86934.93 0.29401 0.00015136 0.17061 8.7831E-05 0.46462 0.00023919 514.808749140497 518.815475599798 76.723 0.99375 76.723 76.141 77.135 -7.6294E-06 133 39 6 0 0 0 0.010129 2 41011 53.775 45.311 1 1.5079 1.1903 0 3067200 1208500 1858600 13035 104 4970 5095 20325;20326 20326 GGTLQIQLAK 10 1 0 Unmodified _GGTLQIQLAK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9;A0A0A0MSJ1;F5H8B8;F5H797;F5H692;F5H532;F5H0I5;Q7Z607;F5H7D5 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.8088 2 514.808574 1027.60259 87503.07 0.25189 0.00012968 0.28125 0.00014479 0.53315 0.00027447 514.808723157683 518.81555602534 76.993 0.6595 76.993 76.733 77.393 0 133 42 5 0 0 0 0.0021232 1 40280 70.525 60.294 1 1.5541 1.236 0 3112800 1029000 2083800 13036 104 4970 5095 20327 20327 GGTPSAFDR 9 0 1 Unmodified _GGTPSAFDR_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;B4E162;P17858;Q7L2M7;Q9BSP4;Q01813;B1APP6;V9GY25 A0A024R0Y5;P17858;Q01813 Q01813 PFKM;PFKL;PFKP ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.2209 2 454.217049 906.419545 89556.3 0.091651 4.163E-05 -0.06232 -2.8307E-05 0.029331 1.3323E-05 454.217298471444 459.220882799445 25.355 0.43583 25.355 25.153 25.589 0 48 16 5 0 0 0 0.0018938 1 10930 79.474 55.502 1 1.8646 2.1535 0 55731000 20473000 35258000 13037 1677;61;1495 4971 5096 20328 20328 GGTVADLDEQDEETVTAGGK 20 1 0 Unmodified _GGTVADLDEQDEETVTAGGK_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 996.4555 2 996.455638 1990.89672 62022.65 0.7166 0.00071406 0.026897 2.6802E-05 0.7435 0.00074086 996.455711640596 1000.96389066799 60.353 0.58223 60.353 60.086 60.668 0 241 52 7 0 0 0 1.0595E-64 3 34394 176.89 171.51 1 0.89306 0.8762 0 20524000 10817000 9707200 13038 1798 4972 5097 20329;20330;20331 20330 GGTVADLDEQDEETVTAGGK 20 1 0 Unmodified _GGTVADLDEQDEETVTAGGK_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1000.963 2 996.455638 1990.89672 61012.29 0.53512 0.00053323 0.05253 5.2344E-05 0.58765 0.00058557 996.956957136163 1000.46268376654 59.619 0.53877 59.619 59.318 59.857 0 223 47 7 0 0 0 2.5751E-31 3 34817 146.77 141.28 1 0.8205 0.88276 0 22767000 12245000 10521000 13039 1798 4972 5097 20332;20333;20334 20334 GGTVADLDEQDEETVTAGGKEDEDPAK 27 2 0 Unmodified _GGTVADLDEQDEETVTAGGKEDEDPAK_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 926.0814 3 926.080822 2775.22064 63190.52 0.70127 0.00064943 -0.31657 -0.00029317 0.3847 0.00035626 926.414506137055 931.75787552474 57.761 0.55035 57.761 57.509 58.059 0 277 43 9 0 0 0 1.8831E-11 2 32588 61.602 61.602 1 0.86594 1.027 0 27234000 14818000 12416000 13040 1798 4973 5098 20335;20336 20336 GGTVADLDEQDEETVTAGGKEDEDPAK 27 2 0 Unmodified _GGTVADLDEQDEETVTAGGKEDEDPAK_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.7521 3 926.080822 2775.22064 63546.61 0.58206 0.00053903 -0.06057 -5.6093E-05 0.52149 0.00048294 926.414786908139 931.758001537714 56.924 0.57662 56.924 56.649 57.226 0 286 42 10 0 0 0 7.3375E-19 3 32767 76.777 76.777 1 0.80964 0.93638 0 37947000 18260000 19687000 13041 1798 4973 5098 20337;20338;20339 20339 GGTVADLDEQDEETVTAGGKEDEDPAK 27 2 0 Unmodified _GGTVADLDEQDEETVTAGGKEDEDPAK_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 931.7587 3 926.080822 2775.22064 61770.9 0.56687 0.00052497 -0.14849 -0.00013751 0.41838 0.00038745 926.414826570341 931.757804337591 68.01 0.53055 68.01 67.727 68.258 7.6294E-06 255 33 10 0 0 0 0.039341 2 35402 16.447 16.447 1 1.5813 1.3511 0 13259000 4999600 8259600 13042 1798 4973 5098 20340;20341 20340 GGTVADLDEQDEETVTAGGKEDEDPAK 27 2 0 Unmodified _GGTVADLDEQDEETVTAGGKEDEDPAK_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 926.42 3 926.080822 2775.22064 62885.66 0.38201 0.00035377 0.31424 0.00029101 0.69625 0.00064478 926.415460081964 931.424222110594 68.705 0.5905 68.705 68.437 69.028 0 279 41 10 0 0 0 0.014929 2 35061 21.462 21.089 1 1.7974 1.5195 0 11993000 4297500 7695800 13043 1798 4973 5098 20342;20343 20343 GGVILVSHDER 11 0 1 Unmodified _GGVILVSHDER_ 0 0 0 B4DRU9;A0A0S2Z5L1;Q9NUQ8 B4DRU9 B4DRU9 ABCF3 ATP-binding cassette sub-family F member 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.3219 2 591.317294 1180.62004 NaN NaN NaN -0.3208 -0.00018969 NaN NaN NaN NaN 32.337 0.099636 32.337 32.295 32.394 0 0 0 0 0.053334 1 16083 43.282 29.075 1 NaN NaN 0 1974400 0 1974400 13044 583 4974 5099 20344 20344 GGVNDNFQGVLQNVR 15 0 1 Unmodified _GGVNDNFQGVLQNVR_ 0 0 0 A0PJG0;CON__Q28194;A0A024R9Q1;P07996 A0PJG0 A0PJG0 THBS1 Thrombospondin-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 808.9114 2 808.91061 1615.80667 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.012 1 90.012 89.512 90.512 -7.6294E-06 0 0 0 0.0085426 1 54353 49.5 41.014 1 + 13045 286 4975 5100 20345 20345 GGVNDNFQGVLQNVR 15 0 1 Unmodified _GGVNDNFQGVLQNVR_ 0 0 0 A0PJG0;CON__Q28194;A0A024R9Q1;P07996 A0PJG0 A0PJG0 THBS1 Thrombospondin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.916 2 808.91061 1615.80667 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.057 1 90.057 89.557 90.557 0 0 0 0 0.034815 1 54386 41.54 27.333 1 + 13046 286 4975 5100 20346 20346 GGVQVPAVDISSSLGGR 17 0 1 Unmodified _GGVQVPAVDISSSLGGR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.9358 2 799.928468 1597.84238 69570.66 1.1346 0.00090759 0.085024 6.8013E-05 1.2196 0.0009756 799.928641331658 804.932678030656 98.491 0.70439 98.491 98.279 98.983 0 266 55 6 0 0 0 7.7481E-05 2 60182 63.76 57.657 1 1.6412 1.7788 0 49655000 20130000 29525000 13047 1696 4976 5101 20347;20348 20347 GGVQVPAVDISSSLGGR 17 0 1 Unmodified _GGVQVPAVDISSSLGGR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.9338 2 799.928468 1597.84238 69371.27 0.73605 0.00058878 0.19647 0.00015716 0.93251 0.00074594 799.928594222024 804.932802360372 97.996 0.59942 97.996 97.672 98.272 0 274 50 7 0 0 0 6.7271E-05 2 61143 72.496 72.496 1 1.5833 1.7292 0 38250000 15612000 22638000 13048 1696 4976 5101 20349;20350 20349 GGVQVPAVDISSSLGGR 17 0 1 Unmodified _GGVQVPAVDISSSLGGR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 800.4311 2 799.928468 1597.84238 69578.89 0.85145 0.0006811 0.61702 0.00049357 1.4685 0.0011747 799.92856842605 804.93304252535 111.35 0.43356 111.35 111.13 111.57 0 91 19 7 0 0 0 0.00090192 1 64486 44.616 44.616 1 1.0062 0.86366 0 8245400 4125900 4119500 13049 1696 4976 5101 20351 20351 GGVQVPAVDISSSLGGR 17 0 1 Unmodified _GGVQVPAVDISSSLGGR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.9295 2 799.928468 1597.84238 68991.99 0.61976 0.00049576 0.65571 0.00052452 1.2755 0.0010203 799.928445855483 804.932504024626 111.25 0.42735 111.25 111.04 111.47 -7.6294E-06 100 19 8 0 0 0 0.038262 1 63473 23.118 23.118 1 1.2346 1.0043 0 9806700 4128900 5677800 13050 1696 4976 5101 20352 20352 GGVSAVAGGVTAVGSAVVNK 20 1 0 Unmodified _GGVSAVAGGVTAVGSAVVNK_ 0 0 0 Q8WUH6 Q8WUH6 Q8WUH6 TMEM263 Transmembrane protein 263 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 854.4789 2 850.4705 1698.92645 NaN NaN NaN -0.66056 -0.00056179 NaN NaN NaN NaN 89.247 0.24925 89.247 89.187 89.437 0 0 0 0 3.816E-10 1 53891 84.759 70.08 1 NaN NaN 0 7124800 0 7124800 13051 1939 4977 5102 20353 20353 GGYHLVK 7 1 0 Unmodified _GGYHLVK_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;D6RBM8 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 391.226 2 387.218863 772.423173 96756.55 -0.26465 -0.00010248 0.45323 0.0001755 0.18858 7.3022E-05 387.218974863341 391.2260849337 21.853 0.33008 21.853 21.744 22.074 0 66 19 6 0 0 0 0.02838 1 8047 72.021 21.901 1 2.4234 2.462 0 27868000 7731200 20137000 13052 1988 4978 5103 20354 20354 GGYTSGTFR 9 0 1 Unmodified _GGYTSGTFR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2292 2 473.224874 944.435195 86847.99 0.42537 0.00020129 -0.0015529 -7.3488E-07 0.42381 0.00020056 473.22518378129 478.229054912145 28.223 0.32709 28.223 28.079 28.406 0 62 22 5 0 0 0 0.00067697 1 13256 95.909 70.083 1 1.2339 1.2647 0 19217000 7213500 12004000 13053 568 4979 5104 20355 20355 GGYTSGTFR 9 0 1 Unmodified _GGYTSGTFR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2247 2 473.224874 944.435195 89007.73 -0.19019 -9.0004E-05 0.37758 0.00017868 0.18739 8.8676E-05 473.225010248156 478.229150297267 27.645 0.27473 27.645 27.483 27.757 -1.9073E-06 50 14 4 0 0 0 0.026156 1 12900 47.574 32.135 1 1.1441 1.2188 0 24439000 12391000 12048000 13054 568 4979 5104 20356 20356 GHAGSVDSIAVDGSGTK 17 1 0 Unmodified _GHAGSVDSIAVDGSGTK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.3856 2 779.378808 1556.74306 69938.92 0.55711 0.0004342 0.16188 0.00012617 0.71899 0.00056037 779.37898321288 783.385875119973 30.576 0.55164 30.576 30.294 30.845 0 176 48 6 0 0 0 1.6517E-13 1 14813 155.66 148.12 1 0.82753 0.8955 0 36019000 21321000 14698000 13055 1792 4980 5105 20357 20357 GHAGSVDSIAVDGSGTK 17 1 0 Unmodified _GHAGSVDSIAVDGSGTK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.3793 2 779.378808 1556.74306 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.288 1 30.288 29.788 30.788 -1.9073E-06 0 0 0 6.398E-08 1 14781 131.06 116.37 1 13056 1792 4980 5105 20358 20358 GHAGSVDSIAVDGSGTK 17 1 0 Unmodified _GHAGSVDSIAVDGSGTK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.7866 3 519.921631 1556.74306 82998 0.38621 0.0002008 -0.42374 -0.00022031 -0.037529 -1.9512E-05 519.920961488207 522.592931613052 30.587 0.84782 30.587 30.24 31.088 1.9073E-06 360 75 6 0 0 0 0.0021722 1 14977 48.883 48.883 1 0.83841 0.89837 0 32520000 16552000 15969000 13057 1792 4980 5105 20359 20359 GHAGSVDSIAVDGSGTK 17 1 0 Unmodified _GHAGSVDSIAVDGSGTK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.3867 2 779.378808 1556.74306 69540.09 1.234 0.00096177 -0.086428 -6.736E-05 1.1476 0.00089441 779.378689928652 783.385816204904 29.75 0.71367 29.75 29.546 30.259 0 226 56 6 0 0 0 1.0474E-34 2 14373 203.87 196.53 1 0.81077 0.84747 0 34356000 22060000 12296000 13058 1792 4980 5105 20360;20361 20361 GHAGSVDSIAVDGSGTK 17 1 0 Unmodified _GHAGSVDSIAVDGSGTK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.9218 3 519.921631 1556.74306 83745.02 0.98138 0.00051024 -0.13895 -7.2242E-05 0.84243 0.000438 519.921458149048 522.59305280541 29.736 0.78857 29.736 29.511 30.3 0 299 62 9 0 0 0 9.8637E-19 3 14409 133.25 130.34 1 0.91361 1.0292 0 59115000 30806000 28309000 13059 1792 4980 5105 20362;20363;20364 20362 GHAGSVDSIAVDGSGTK 17 1 0 Unmodified _GHAGSVDSIAVDGSGTK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.3861 2 779.378808 1556.74306 69217.81 0.58944 0.00045939 -0.58772 -0.00045806 0.0017149 1.3366E-06 779.378386178943 783.38523299436 35.144 0.94106 35.144 34.647 35.588 0 362 82 7 0 0 0 0.011014 1 15452 46.159 46.159 1 1.358 1.0752 0 10423000 4301800 6120700 13060 1792 4980 5105 20365 20365 GHAGSVDSIAVDGSGTK 17 1 0 Unmodified _GHAGSVDSIAVDGSGTK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.593 3 519.921631 1556.74306 84347.38 0.21198 0.00011021 -0.87441 -0.00045462 -0.66243 -0.00034441 519.921508995077 522.592214135027 35.139 1.286 35.139 34.566 35.852 0 397 110 8 0 0 0 4.6359E-05 2 15566 54.795 51.134 1 1.4064 1.0901 0 13585000 5820000 7765000 13061 1792 4980 5105 20366;20367 20367 GHAGSVDSIAVDGSGTK 17 1 0 Unmodified _GHAGSVDSIAVDGSGTK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.3861 2 779.378808 1556.74306 69178.95 0.73927 0.00057617 -0.36195 -0.0002821 0.37732 0.00029407 779.378582918622 783.385683086042 35.04 0.86845 35.04 34.62 35.488 0 350 73 6 0 0 0 0.011014 1 15000 46.159 44.18 1 1.2537 1.0216 0 7550400 3645700 3904700 13062 1792 4980 5105 20368 20368 GHAGSVDSIAVDGSGTK 17 1 0 Unmodified _GHAGSVDSIAVDGSGTK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.9276 3 519.921631 1556.74306 83693.98 0.42676 0.00022188 -0.45492 -0.00023652 -0.028157 -1.4639E-05 519.921524228264 522.592789673478 35.052 0.84204 35.052 34.631 35.473 -3.8147E-06 353 71 6 0 0 0 0.0053436 2 15058 27.032 27.032 1 1.3462 1.0969 0 7522700 3539800 3982900 13063 1792 4980 5105 20369;20370 20369 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.0357 3 612.028106 1833.06249 79226.72 1.0923 0.0006685 -0.23662 -0.00014482 0.85564 0.00052368 612.027775942228 619.034282936881 129.89 0.32242 129.89 129.71 130.03 0 35 16 4 0 0 0 0.00076024 1 84685 44.294 44.294 1 1.0972 1.2418 0 4425800 2411900 2013900 13064 303 4981 5106 20371 20371 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.3629 3 612.028106 1833.06249 77073.62 0.93252 0.00057073 -0.20404 -0.00012488 0.72848 0.00044585 612.362243202339 618.700122473732 131.29 1.5996 131.29 130.5 132.1 0 588 104 9 0 0 0 2.0825E-07 3 85751 98.694 98.694 1 0.97149 1.0571 0 62309000 28999000 33311000 13065 303 4981 5106 20372;20373;20374 20374 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.277 4 459.272898 1833.06249 91930.52 0.70887 0.00032556 -0.54006 -0.00024803 0.16881 7.7529E-05 459.272678109382 464.27669554711 131.24 0.53079 131.24 130.98 131.51 -1.5259E-05 101 35 4 0 0 0 0.0041073 1 85595 30.961 30.961 1 0.94665 1.0563 0 7926200 4061900 3864300 13066 303 4981 5106 20375 20375 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.7009 3 612.028106 1833.06249 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.57 1 128.57 128.07 129.07 0 0 0 0 0.012333 1 83852 42.568 38.326 1 13067 303 4981 5106 20376 20376 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.7016 3 612.028106 1833.06249 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.78 1 129.78 129.28 130.28 0 0 0 0 0.028202 1 84585 37.555 26.081 1 13068 303 4981 5106 20377 20377 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.0286 3 612.028106 1833.06249 79644.94 0.67559 0.00041348 0.026307 1.6101E-05 0.70189 0.00042958 612.362266653014 618.700333615952 125.19 1.1923 125.19 124.45 125.65 0 180 83 5 0 0 0 0.00016801 3 83549 52.254 52.254 1 0.99481 0.98594 0 7346800 2674100 4672700 13069 303 4981 5106 20378;20379;20380 20380 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.0284 3 612.028106 1833.06249 79290.99 0.75306 0.0004609 -0.031687 -1.9393E-05 0.72138 0.0004415 612.362302248545 618.700136331587 126.12 0.88445 126.12 125.86 126.75 7.6294E-06 154 53 6 0 0 0 0.00016236 1 84162 52.823 52.823 1 1.0559 1.064 0 10108000 4709800 5398000 13070 303 4981 5106 20381 20381 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.0352 3 612.028106 1833.06249 78822.13 0.69632 0.00042617 0.042079 2.5754E-05 0.7384 0.00045192 612.362385976029 618.700258893989 126.98 0.6591 126.98 126.75 127.41 0 102 41 4 0 0 0 0.0001653 2 84970 52.527 52.527 1 0.93147 0.91697 0 6201800 2697100 3504700 13071 303 4981 5106 20382;20383 20383 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.0349 3 612.028106 1833.06249 77492.73 0.52233 0.00031968 0.19087 0.00011682 0.71319 0.00043649 612.028176465387 618.700622044538 129.48 0.52222 129.48 129.16 129.68 0 83 29 5 0 0 0 0.00047685 1 86467 46.926 46.926 1 0.86185 0.8484 0 6160400 2851000 3309400 13072 303 4981 5106 20384 20384 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.3626 3 612.028106 1833.06249 77381.11 0.81043 0.00049601 -0.079782 -4.8829E-05 0.73065 0.00044718 612.362251377063 618.700258779693 131.21 1.2905 131.21 130.45 131.74 0 482 93 7 0 0 0 7.0768E-05 3 87684 67.646 67.646 1 0.94151 1.0506 0 25579000 11794000 13785000 13073 303 4981 5106 20385;20386;20387 20386 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.701 3 612.028106 1833.06249 NaN NaN NaN -0.20908 -0.00012796 NaN NaN NaN NaN 126.57 0.56631 126.57 126.22 126.79 7.6294E-06 0 0 0 0.042569 1 84340 36.193 30.764 1 NaN NaN 0 4770500 0 4770500 13074 303 4981 5106 20388 20388 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.7009 3 612.028106 1833.06249 NaN NaN NaN 0.20607 0.00012612 NaN NaN NaN NaN 129.99 0.58475 129.99 129.65 130.24 0 0 0 0 0.0014058 1 86802 63.709 60.105 1 NaN NaN 0 3578300 0 3578300 13075 303 4981 5106 20389 20389 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.0289 3 612.028106 1833.06249 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.64 1 124.64 124.14 125.14 0 0 0 0 0.033894 1 82939 35.757 31.441 1 13076 303 4981 5106 20390 20390 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.7003 3 612.028106 1833.06249 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.05 1 128.05 127.55 128.55 0 0 0 0 0.0003913 1 85549 58.831 49.301 1 13077 303 4981 5106 20391 20391 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.3629 3 612.028106 1833.06249 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.04 1 129.04 128.54 129.54 0 0 0 0 0.0015283 1 86175 54.501 45.095 1 13078 303 4981 5106 20392 20392 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.0286 3 612.028106 1833.06249 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.09 1 129.09 128.59 129.59 0 0 0 0 0.025969 1 86209 38.261 28.855 1 13079 303 4981 5106 20393 20393 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.7019 3 612.028106 1833.06249 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.14 1 129.14 128.64 129.64 0 0 0 0 0.028202 1 86241 37.555 30.497 1 13080 303 4981 5106 20394 20394 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.0287 3 612.028106 1833.06249 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.3 1 130.3 129.8 130.8 0 0 0 0 0.043563 1 87088 32.702 27.16 1 13081 303 4981 5106 20395 20395 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.0283 3 612.028106 1833.06249 79483.17 0.61009 0.00037339 0.22084 0.00013516 0.83093 0.00050855 612.028225708642 618.700282082193 123.71 0.54676 123.71 123.44 123.98 0 86 37 5 0 0 0 0.021299 1 82312 26.148 26.148 1 0.97116 0.95471 0 5073100 2322100 2751000 13082 303 4981 5106 20396 20396 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.7007 3 612.028106 1833.06249 76753.96 0.68485 0.00041915 0.02489 1.5233E-05 0.70974 0.00043438 612.362389764292 618.700300668702 121.24 1.0202 121.24 121.03 122.05 -7.6294E-06 351 50 10 0 0 0 4.5194E-05 3 72031 79.652 79.652 1 1.4201 1.1324 0 91118000 37344000 53774000 13083 303 4981 5106 20397;20398;20399 20398 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.2769 4 459.272898 1833.06249 88076.59 0.54684 0.00025115 -0.3112 -0.00014293 0.23564 0.00010822 459.272513465955 464.276898055458 121.29 0.53987 121.29 121.07 121.61 0 91 24 7 0 0 0 4.1158E-05 2 72117 70.98 70.98 1 1.5631 1.3341 0 6688400 2341400 4347000 13084 303 4981 5106 20400;20401 20401 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.7011 3 612.028106 1833.06249 78211.23 0.6459 0.00039531 0.013076 8.0027E-06 0.65898 0.00040331 612.36238339152 618.700287650349 120.92 0.77494 120.92 120.69 121.47 0 90 37 6 0 0 0 1.537E-06 2 70881 89.541 89.541 1 0.66731 0.62962 0 72635000 36600000 36035000 13085 303 4981 5106 20402;20403 20403 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 464.2769 4 459.272898 1833.06249 88123.02 0.29727 0.00013653 -0.14848 -6.8191E-05 0.14879 6.8335E-05 459.523730212912 464.527550817383 120.9 0.49911 120.9 120.69 121.19 -7.6294E-06 82 21 6 0 0 0 4.0222E-05 2 70947 63.037 63.037 1 1.7045 1.5433 0 4886600 1637400 3249200 13086 303 4981 5106 20404;20405 20405 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.2939 2 539.293622 1076.57269 82340.42 0.74755 0.00040315 -0.44784 -0.00024152 0.29971 0.00016163 539.29379845109 544.297357538498 36.844 1.5421 36.844 36.582 38.125 0 778 135 11 0 0 0 1.8459E-05 2 18550 105.52 98.625 1 0.73226 0.87369 0 3249800000 1773500000 1476400000 13087 744 4982 5107 20406;20407 20406 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 359.8651 3 359.86484 1076.57269 99340.57 0.20127 7.2431E-05 -0.077328 -2.7828E-05 0.12394 4.4603E-05 359.864889925772 363.200938078361 36.845 1.4431 36.845 36.603 38.046 0 679 125 11 0 0 0 6.5939E-05 2 18592 76.345 61.851 1 0.76854 0.91344 0 1113000000 600890000 512150000 13088 744 4982 5107 20408;20409 20408 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.2941 2 539.293622 1076.57269 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.422 1 37.422 36.922 37.922 0 0 0 0 3.2366E-05 1 19051 87.308 65.176 1 13089 744 4982 5107 20410 20410 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.2939 2 539.293622 1076.57269 82067.91 1.374 0.00074097 -0.35355 -0.00019067 1.0204 0.0005503 539.293702589151 544.297569670627 35.223 1.5211 35.223 34.859 36.38 0 843 132 11 0 0 0 4.7221E-08 4 18327 117.89 104.85 1 0.81904 0.97717 0 3094100000 1589800000 1504300000 13090 744 4982 5107 20411;20412;20413;20414 20413 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 359.8647 3 359.86484 1076.57269 98917.41 1.0408 0.00037456 -0.21971 -7.9067E-05 0.82111 0.00029549 359.864784860199 363.20098688882 35.224 1.0929 35.224 35.029 36.122 0 592 96 9 0 0 0 0.00013105 2 17960 58.246 50.442 1 0.82992 0.97597 0 964970000 483500000 481460000 13091 744 4982 5107 20415;20416 20416 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.2937 2 539.293622 1076.57269 82136.15 0.4924 0.00026555 -0.4438 -0.00023934 0.048599 2.6209E-05 539.293966324999 544.297545847123 41.356 2.4128 41.356 40.839 43.252 3.8147E-06 1023 178 11 0 0 0 0.00038509 5 19514 82.645 82.645 1 1.5467 1.348 0 402110000 158920000 243190000 13092 744 4982 5107 20417;20418;20419;20420;20421 20420 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 359.8647 3 359.86484 1076.57269 97960.98 -0.059818 -2.1526E-05 -0.037849 -1.3621E-05 -0.097667 -3.5147E-05 359.86497660709 363.200977491598 41.328 1.8174 41.328 40.924 42.741 0 787 138 10 0 0 0 0.0055766 2 19092 33.229 29.574 1 1.5359 1.3297 0 138470000 53058000 85408000 13093 744 4982 5107 20422;20423 20423 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.2939 2 539.293622 1076.57269 81207.67 0.27674 0.00014925 -0.19025 -0.0001026 0.086497 4.6647E-05 539.294124179252 544.297734190052 41.144 2.4159 41.144 40.876 43.292 3.8147E-06 901 175 10 0 0 0 2.0681E-08 4 18425 122.13 122.13 1 1.6052 1.4028 0 381610000 139810000 241800000 13094 744 4982 5107 20424;20425;20426;20427 20425 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 359.8648 3 359.86484 1076.57269 99026.54 -0.24476 -8.8081E-05 0.2149 7.7335E-05 -0.029861 -1.0746E-05 359.865045737723 363.201076550044 41.168 1.6415 41.168 40.792 42.433 0 729 129 10 0 0 0 0.0025058 2 18464 36.318 36.318 1 1.6129 1.4081 0 119510000 45439000 74066000 13095 744 4982 5107 20428;20429 20429 GHFEAFGTLTDCVVVVNPQTK 21 1 0 Unmodified _GHFEAFGTLTDCVVVVNPQTK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.0544 3 773.719449 2318.13652 67699.45 1.0958 0.00084786 0.66386 0.00051364 1.7597 0.0013615 774.053431045286 776.725060796035 115.36 0.5443 115.36 115.1 115.64 0 107 25 7 0 0 0 4.2022E-07 2 67534 50.237 50.237 1 0.60003 0.48156 0 7651200 4418000 3233200 13096 1706 4983 5108 20430;20431 20430 GHFNIQPNK 9 1 0 Unmodified _GHFNIQPNK_ 0 0 0 H7C0R7;Q9UHQ9 H7C0R7 H7C0R7 CYB5R1 NADH-cytochrome b5 reductase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.7825 2 527.775065 1053.53558 84958.43 -0.25217 -0.00013309 0.66925 0.00035321 0.41708 0.00022012 527.774983536157 531.782149981244 24.462 0.39394 24.462 24.314 24.708 0 33 14 5 0 0 0 0.0070421 1 10226 62.659 53.796 1 2.8464 2.8095 0 9295000 2174400 7120600 13097 1315 4984 5109 20432 20432 GHLDALTADVK 11 1 0 Unmodified _GHLDALTADVK_ 0 0 0 P57740;B3KMK0 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.3138 2 570.306395 1138.59824 83630.71 0.53133 0.00030302 -0.47765 -0.00027241 0.05368 3.0614E-05 570.305824409087 574.313038644843 53.768 0.47623 53.768 53.559 54.036 0 127 35 5 0 0 0 0.0074689 1 26769 52.549 35.309 1 1.3975 1.1658 0 1719800 715620 1004100 13098 1621 4985 5110 20433 20433 GHLENNPALEK 11 1 0 Unmodified _GHLENNPALEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.322 2 611.314751 1220.61495 76957.48 -0.034141 -2.0871E-05 0.21389 0.00013076 0.17975 0.00010988 611.314984795281 615.321944597601 22.035 0.96431 22.035 21.784 22.748 -1.9073E-06 335 59 11 0 0 0 4.2294E-66 2 8096 223.14 165.29 1 1.0717 1.2747 0 595650000 296030000 299620000 13099 345 4986 5111 20434;20435 20434 GHLENNPALEK 11 1 0 Unmodified _GHLENNPALEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 407.8791 3 407.878926 1220.61495 93503.28 -0.4553 -0.00018571 0.63708 0.00025985 0.18178 7.4144E-05 407.879116611924 410.550498809363 22.024 0.40681 22.024 21.875 22.281 0 101 20 8 0 0 0 0.0028874 1 8224 38.238 33.022 1 1.1066 1.0962 0 25851000 11600000 14251000 13100 345 4986 5111 20436 20436 GHLENNPALEK 11 1 0 Unmodified _GHLENNPALEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3145 2 611.314751 1220.61495 77288.06 0.25485 0.00015579 -0.1964 -0.00012006 0.058449 3.5731E-05 611.314735083338 615.321696384227 21.614 0.79723 21.614 21.343 22.14 0 243 37 10 0 0 0 4.7377E-80 2 7640 234.67 153.59 1 0.99062 1.1682 0 730470000 360910000 369550000 13101 345 4986 5111 20437;20438 20438 GHLENNPALEK 11 1 0 Unmodified _GHLENNPALEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.3218 2 611.314751 1220.61495 76790.88 0.32106 0.00019627 -0.56357 -0.00034452 -0.24251 -0.00014825 611.314308879637 615.32156803168 23.796 0.97472 23.796 23.62 24.595 0 246 53 8 0 0 0 4.2294E-66 2 8125 223.14 155.25 1 0.9476 0.81566 0 92316000 47178000 45138000 13102 345 4986 5111 20439;20440 20439 GHLENNPALEK 11 1 0 Unmodified _GHLENNPALEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;Q8NHW5;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.3149 2 611.314751 1220.61495 77315.05 0.31241 0.00019098 -0.58956 -0.0003604 -0.27715 -0.00016943 611.314449446277 615.32147243459 23.582 1.3274 23.582 23.304 24.632 1.9073E-06 332 74 9 0 0 0 1.1819E-40 2 7543 189.58 130.23 1 0.91221 0.771 0 57805000 29418000 28387000 13103 345 4986 5111 20441;20442 20442 GHLSGLAK 8 1 0 Unmodified _GHLSGLAK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 395.7364 2 391.729595 781.444637 100716.8 -0.028514 -1.117E-05 -0.12479 -4.8884E-05 -0.1533 -6.0054E-05 391.72952697009 395.73652578029 19.151 0.31341 19.151 18.911 19.225 0 39 17 6 0 0 0 0.039038 1 5498 47.743 12.851 1 1.4905 1.4927 0 15689000 7070600 8618600 13104 1754 4987 5112 20443 20443 GHLSGLAK 8 1 0 Unmodified _GHLSGLAK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 395.7366 2 391.729595 781.444637 95721.01 -0.25874 -0.00010136 0.18053 7.072E-05 -0.078211 -3.0638E-05 391.729413967197 395.736654963898 20.005 0.29688 20.005 19.873 20.17 0 55 15 5 0 0 0 0.055747 1 5543 41.652 7.914 1 3.2568 2.7546 0 2054900 565400 1489500 13105 1754 4987 5112 20444 20444 GHNGWVTQIATTPQFPDMILSASR 24 0 1 Unmodified _GHNGWVTQIATTPQFPDMILSASR_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;D6RHH4;D6REE5;D6RBD0;D6RFZ9;D6RAU2;E9PD14;B4E0C3;D6RGK8;D6R909;B4DWC6;D6RHJ5;I3QNU9;D6RDI0 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 876.4436 3 876.439345 2626.29621 65141.05 0.71514 0.00062678 0.081564 7.1486E-05 0.79671 0.00069827 876.438771229638 880.109805354794 131.77 0.34142 131.77 131.59 131.93 0 83 15 9 0 0 0 0.052111 1 80044 9.5865 9.5865 1 1.977 1.7156 0 2422400 754090 1668300 13106 1227 4988 5113 20445 20445 GHNQPCLLVGSGR 13 0 1 Unmodified _GHNQPCLLVGSGR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8506 2 697.851509 1393.68847 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.396 1 36.396 35.896 36.896 0 0 0 0 0.034872 1 18703 53.683 42.853 1 13107 1259 4989 5114 20446 20446 GHPEFSTNR 9 0 1 Unmodified _GHPEFSTNR_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.7465 2 522.746505 1043.47846 NaN NaN NaN -0.16028 -8.3784E-05 NaN NaN NaN NaN 18.319 0.24438 18.319 18.173 18.417 0 0 0 0 0.011876 1 5250 65.252 54.838 1 NaN NaN 0 2774000 2774000 0 13108 613 4990 5115 20447 20447 GHQLLEEVTQGDMSAADTFLSDLPR 25 0 1 Oxidation (M) _GHQLLEEVTQGDM(ox)SAADTFLSDLPR_ GHQLLEEVTQGDM(1)SAADTFLSDLPR GHQLLEEVTQGDM(72.3)SAADTFLSDLPR 0 1 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 916.4387 3 916.104468 2745.29157 64107.58 0.74601 0.00068343 -0.26127 -0.00023935 0.48474 0.00044407 916.438349959848 919.774669920593 121.62 1.5128 121.62 120.8 122.31 0 403 100 8 0 0 0 9.3956E-13 3 78560 72.302 72.302 1 1.2763 1.2867 0 15636000 7471400 8164300 13109 1898 4991 5116 20448;20449;20450 20449 1741 GHQLLEEVTQGDMSAADTFLSDLPR 25 0 1 Oxidation (M) _GHQLLEEVTQGDM(ox)SAADTFLSDLPR_ GHQLLEEVTQGDM(1)SAADTFLSDLPR GHQLLEEVTQGDM(56.95)SAADTFLSDLPR 0 1 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.4399 3 916.104468 2745.29157 63687.3 0.91051 0.00083412 -0.65778 -0.0006026 0.25272 0.00023152 916.772688425876 919.774665843547 120.56 1.2766 120.56 119.89 121.17 0 483 87 8 0 0 0 1.0317E-09 3 79495 56.947 56.947 1 1.4394 1.5422 0 25172000 10835000 14338000 13110 1898 4991 5116 20451;20452;20453 20452 1741 GHQLLSADVDIK 12 1 0 Unmodified _GHQLLSADVDIK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.36 2 648.351334 1294.68811 NaN NaN NaN 0.73822 0.00047862 NaN NaN NaN NaN 62.63 0.082443 62.63 62.597 62.68 -3.8147E-06 0 0 0 0.0015896 1 35959 76.332 64.618 1 NaN NaN 0 3072900 0 3072900 13111 1096 4992 5117 20454 20454 GHQLLSADVDIK 12 1 0 Unmodified _GHQLLSADVDIK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3593 2 648.351334 1294.68811 NaN NaN NaN 0.30919 0.00020046 NaN NaN NaN NaN 60.617 0.25346 60.617 60.5 60.753 0 0 0 0 0.0014749 1 35476 77.64 64.049 1 NaN NaN 0 6104700 0 6104700 13112 1096 4992 5117 20455 20455 GHQLLSADVDIK 12 1 0 Unmodified _GHQLLSADVDIK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.3513 2 648.351334 1294.68811 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.666 1 60.666 60.166 61.166 0 0 0 0 0.014598 1 35521 54.471 32.385 1 13113 1096 4992 5117 20456 20456 GHQLSITCLVVTPDDSAIFSAAK 23 1 0 Unmodified _GHQLSITCLVVTPDDSAIFSAAK_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.085 3 810.749297 2429.22606 69088.56 0.77902 0.00063159 0.51369 0.00041647 1.2927 0.0010481 811.083634656033 813.420354115319 117.55 0.66807 117.55 117.22 117.89 0 287 44 9 0 0 0 5.1517E-08 4 75185 51.001 51.001 1 0.71947 0.72635 0 18384000 11077000 7307600 13114 1389 4993 5118 20457;20458;20459;20460 20458 GHQLSITCLVVTPDDSAIFSAAK 23 1 0 Unmodified _GHQLSITCLVVTPDDSAIFSAAK_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.083 3 810.749297 2429.22606 69571.75 0.57886 0.00046931 0.20229 0.00016401 0.78116 0.00063332 810.749361051112 813.420735826933 116.77 0.53166 116.77 116.55 117.08 0 185 32 8 0 0 0 0.00099399 1 76423 28.328 28.328 1 0.82713 0.82634 0 15183000 8306100 6876700 13115 1389 4993 5118 20461 20461 GHQLSITCLVVTPDDSAIFSAAK 23 1 0 Unmodified _GHQLSITCLVVTPDDSAIFSAAK_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.0839 3 810.749297 2429.22606 66704.52 0.93445 0.00075761 -0.052598 -4.2644E-05 0.88185 0.00071496 811.083540493286 813.754963530139 128.89 0.74727 128.89 128.55 129.3 0 193 34 11 0 0 0 1.3581E-05 3 77934 37.642 37.642 1 1.1485 0.91209 0 19079000 9282000 9796700 13116 1389 4993 5118 20462;20463;20464 20464 GHQLSITCLVVTPDDSAIFSAAK 23 1 0 Unmodified _GHQLSITCLVVTPDDSAIFSAAK_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 813.7566 3 810.749297 2429.22606 67830.03 0.8845 0.00071711 0.17099 0.00013863 1.0555 0.00085574 811.083728340232 813.755270111789 128.69 0.51768 128.69 128.37 128.89 -1.5259E-05 144 20 10 0 0 0 9.9911E-09 3 76803 61.141 61.141 1 1.095 0.90361 0 11203000 5271400 5931300 13117 1389 4993 5118 20465;20466;20467 20465 GHRIEEVPELPLVVEDK 17 1 1 Unmodified _GHRIEEVPELPLVVEDK_ 0 0 1 P36578;Q59GY2;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.0319 3 653.689707 1958.04729 75412.24 0.68763 0.00044949 0.22185 0.00014502 0.90948 0.00059452 654.023866954498 659.697520537058 103.04 0.69551 103.04 102.83 103.53 -7.6294E-06 221 44 8 0 0 0 0.00075977 2 58481 39.385 36.048 1 1.1409 0.97681 0 10471000 4947200 5524100 13118 1548 4994 5119 20468;20469 20469 GHRIEEVPELPLVVEDK 17 1 1 Unmodified _GHRIEEVPELPLVVEDK_ 0 0 1 P36578;Q59GY2;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.6898 3 653.689707 1958.04729 74925 0.47216 0.00030865 0.55663 0.00036387 1.0288 0.00067251 654.024018821687 660.031571286747 102.53 0.46632 102.53 102.3 102.77 0 178 31 8 0 0 0 0.022153 2 57242 22.435 22.435 1 1.0486 0.87895 0 6148600 2927000 3221500 13119 1548 4994 5119 20470;20471 20471 GHSLSDGLEEVQK 13 1 0 Unmodified _GHSLSDGLEEVQK_ 0 0 0 C9JNK6;C9JAZ1;B7Z9F3;O75431;B3KM74 C9JNK6 C9JNK6 MTX2 Metaxin-2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.8475 2 699.846613 1397.67867 NaN NaN NaN 0.42489 0.00029736 NaN NaN NaN NaN 42.221 0.59448 42.221 41.818 42.413 0 0 0 0 0.00017869 1 22362 89.827 80.872 1 NaN NaN 0 5513200 5513200 0 13120 1107 4995 5120 20472 20472 GHSLSDGLEEVQK 13 1 0 Unmodified _GHSLSDGLEEVQK_ 0 0 0 C9JNK6;C9JAZ1;B7Z9F3;O75431;B3KM74 C9JNK6 C9JNK6 MTX2 Metaxin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.8531 2 699.846613 1397.67867 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.21 1 42.21 41.71 42.71 0 0 0 0 1.0112E-16 1 22389 129.82 107.18 1 13121 1107 4995 5120 20473 20473 GHSLSDGLEEVQK 13 1 0 Unmodified _GHSLSDGLEEVQK_ 0 0 0 C9JNK6;C9JAZ1;B7Z9F3;O75431;B3KM74 C9JNK6 C9JNK6 MTX2 Metaxin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.8547 2 699.846613 1397.67867 74264.45 0.7672 0.00053692 -0.35306 -0.00024709 0.41414 0.00028983 699.846436961298 703.853306362582 40.82 0.4488 40.82 40.649 41.098 3.8147E-06 93 31 4 0 0 0 6.0764E-24 1 21986 159.83 146.74 1 1.4845 1.5229 0 17707000 6839800 10867000 13122 1107 4995 5120 20474 20474 GHSSDSNPAICR 12 0 1 Unmodified _GHSSDSNPAICR_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8;H7C1M8;A0A087WYW2 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.7891 2 650.788575 1299.5626 76939.54 0.59869 0.00038962 -0.49431 -0.00032169 0.10438 6.7931E-05 650.78816923503 655.792464381106 16.847 0.21893 16.847 16.743 16.962 0 25 7 4 0 0 0 2.2866E-05 2 4097 102.06 102.06 1 1.3841 1.4517 0 4341800 1763600 2578200 13123 907 4996 5121 20475;20476 20475 GHSVEEALR 9 0 1 Unmodified _GHSVEEALR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.2607 2 499.256705 996.498858 NaN NaN NaN 0.34072 0.00017011 NaN NaN NaN NaN 23.274 0.386 23.274 23.145 23.531 0 0 0 0 0.00010242 1 9218 99.802 51.954 1 NaN NaN 0 13861000 0 13861000 13124 397;1622 4997 5122 20477 20477 GHSVLPLEEAVEGFK 15 1 0 Unmodified _GHSVLPLEEAVEGFK_ 0 0 0 P14373;Q59EC6;A0A0G2JIZ4 P14373 P14373 TRIM27 Zinc finger protein RFP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.9322 2 806.422487 1610.83042 70906.38 1.0326 0.00083269 0.044087 3.5553E-05 1.0767 0.00086824 806.923716391964 810.42982312606 102.43 0.39479 102.43 102.23 102.62 0 62 30 4 0 0 0 0.00022333 1 64747 68.893 66.481 1 0.79407 0.80479 0 9061500 3651400 5410100 13125 1480 4998 5123 20478 20478 GHSVLPLEEAVEGFK 15 1 0 Unmodified _GHSVLPLEEAVEGFK_ 0 0 0 P14373;Q59EC6;A0A0G2JIZ4 P14373 P14373 TRIM27 Zinc finger protein RFP MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.4299 2 806.422487 1610.83042 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.27 1 102.27 101.77 102.77 0 0 0 0 0.0014901 1 64525 65.5 32.272 1 13126 1480 4998 5123 20479 20479 GHSVLPLEEAVEGFK 15 1 0 Unmodified _GHSVLPLEEAVEGFK_ 0 0 0 P14373;Q59EC6;A0A0G2JIZ4 P14373 P14373 TRIM27 Zinc finger protein RFP MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.6219 3 537.95075 1610.83042 90175.55 0.94188 0.00050669 -0.46272 -0.00024892 0.47916 0.00025777 538.284852180985 540.621740199869 114.27 0.43334 114.27 114.12 114.55 0 42 18 4 0 0 0 0.039653 1 66763 11.606 11.606 1 2.6917 2.3731 0 937840 311060 626790 13127 1480 4998 5123 20480 20480 GHTSFVNSCYPAR 13 0 1 Unmodified _GHTSFVNSCYPAR_ 0 0 0 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.3414 2 748.340975 1494.6674 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.361 1 33.361 32.861 33.861 0 0 0 0 0.0020554 1 16706 68.893 54.686 1 13128 643 4999 5124 20481 20481 GHVAALDWVTK 11 1 0 Unmodified _GHVAALDWVTK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.832 2 598.824755 1195.63496 NaN NaN NaN 0.24525 0.00014686 NaN NaN NaN NaN 69.776 0.90977 69.776 69.192 70.102 7.6294E-06 0 0 0 1.3018E-08 1 41378 116.52 96.527 1 NaN NaN 0 26620000 0 26620000 13129 809 5000 5125 20482 20482 GHVAALDWVTK 11 1 0 Unmodified _GHVAALDWVTK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.825 2 598.824755 1195.63496 77187.34 0.37367 0.00022376 -0.50514 -0.00030249 -0.13147 -7.8726E-05 598.824452710741 602.831449117058 80.362 0.43058 80.362 80.165 80.595 7.6294E-06 148 32 6 0 0 0 0.00031336 1 43437 87.895 87.895 1 1.1565 0.9268 0 8392800 3666200 4726600 13130 809 5000 5125 20483 20483 GHVAALDWVTK 11 1 0 Unmodified _GHVAALDWVTK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.8254 2 598.824755 1195.63496 78687.04 0.57437 0.00034394 -0.15506 -9.2852E-05 0.41931 0.00025109 598.82471158327 602.831592593582 80.472 0.51038 80.472 80.112 80.622 0 112 30 7 0 0 0 7.4096E-10 1 42640 126.31 120.53 1 1.1831 0.96797 0 12588000 6280300 6307600 13131 809 5000 5125 20484 20484 GHVDILAPTVQELAALEK 18 1 0 Unmodified _GHVDILAPTVQELAALEK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.0266 3 635.354436 1903.04148 75308.16 0.81478 0.00051767 0.23285 0.00014794 1.0476 0.00066561 635.354462367339 638.026000314655 116.36 0.77792 116.36 116.03 116.81 0 306 51 8 0 0 0 2.1662E-17 2 74198 91.401 91.401 1 1.0032 1.0807 0 41006000 19935000 21070000 13132 452 5001 5126 20485;20486 20486 GHVDILAPTVQELAALEK 18 1 0 Unmodified _GHVDILAPTVQELAALEK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3622 3 635.354436 1903.04148 75181.03 0.78356 0.00049784 0.35566 0.00022597 1.1392 0.00072381 635.354215255773 638.026242320357 115.46 0.96111 115.46 115.15 116.11 0 296 62 10 0 0 0 7.8117E-23 2 75302 98.573 98.573 1 1.0312 1.1607 0 70532000 34906000 35626000 13133 452 5001 5126 20487;20488 20488 GHVELSEAR 9 0 1 Unmodified _GHVELSEAR_ 0 0 0 Q96H79 Q96H79 Q96H79 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.261 2 499.256705 996.498858 NaN NaN NaN -0.091821 -4.5842E-05 NaN NaN NaN NaN 19.455 0.29212 19.455 19.364 19.657 0 0 0 0 0.00054128 1 5922 91.069 59.765 1 NaN NaN 0 5203600 0 5203600 13134 1971 5002 5127 20489 20489 GHVELSEAR 9 0 1 Unmodified _GHVELSEAR_ 0 0 0 Q96H79 Q96H79 Q96H79 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.2574 2 499.256705 996.498858 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.504 1 19.504 19.004 20.004 0 0 0 0 0.013328 1 5925 60.436 34.7 1 13135 1971 5002 5127 20490 20490 GHVFEESQVAGTPMFVVK 18 1 0 Oxidation (M) _GHVFEESQVAGTPM(ox)FVVK_ GHVFEESQVAGTPM(1)FVVK GHVFEESQVAGTPM(71.91)FVVK 0 1 0 P13639;Q8TA90;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.6677 3 659.996142 1976.9666 74684.63 0.74319 0.00049051 0.63109 0.00041651 1.3743 0.00090702 660.331241030606 662.668120195219 80.058 1.1863 80.058 79.533 80.719 -7.6294E-06 378 94 7 0 0 0 5.4111E-06 1 48623 71.909 70.217 1 5.1696 5.6698 0 41073000 6095700 34978000 13136 1478 5003 5128 20491 20491 1226 GHVQPIR 7 0 1 Unmodified _GHVQPIR_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q75MH1 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.7391 2 403.735212 805.455871 NaN NaN NaN -0.068779 -2.7769E-05 NaN NaN NaN NaN 16.615 0.42669 16.615 16.535 16.962 0 0 0 0 0.020002 1 3956 99.511 60.292 1 NaN NaN 0 16614000 0 16614000 13137 319 5004 5129 20492 20492 GHVQPIR 7 0 1 Unmodified _GHVQPIR_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q75MH1 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 403.7351 2 403.735212 805.455871 NaN NaN NaN NaN NaN NaN NaN NaN NaN 16.676 1 16.676 16.176 17.176 0 0 0 0 0.018615 1 3955 109.88 84.882 1 13138 319 5004 5129 20493 20493 GHVTQDAPIPGSPLYTIK 18 1 0 Unmodified _GHVTQDAPIPGSPLYTIK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.6789 3 632.007147 1892.99961 76254.66 0.54483 0.00034434 -0.90535 -0.00057219 -0.36052 -0.00022785 632.0070036479 634.678647951532 82.1 0.79294 82.1 81.746 82.538 0 410 70 8 0 0 0 0.0033895 2 50283 28.472 28.472 1 0.98617 1.1037 0 84072000 42165000 41907000 13139 794 5005 5130 20494;20495 20495 GHVTQDAPIPGSPLYTIK 18 1 0 Unmodified _GHVTQDAPIPGSPLYTIK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3425 3 632.007147 1892.99961 77434.61 0.66288 0.00041894 0.16389 0.00010358 0.82677 0.00052253 632.34167058982 634.678879288202 95.121 0.40366 95.121 94.943 95.346 0 169 28 8 0 0 0 0.05741 1 53259 11.499 11.499 1 0.96651 0.77388 0 8577800 4613900 3963800 13140 794 5005 5130 20496 20496 GHVTQDAPIPGSPLYTIK 18 1 0 Unmodified _GHVTQDAPIPGSPLYTIK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.6791 3 632.007147 1892.99961 77600.25 0.63249 0.00039974 0.66652 0.00042124 1.299 0.00082099 632.341710592831 634.678881634547 94.896 0.44897 94.896 94.649 95.098 -7.6294E-06 135 28 7 0 0 0 0.0018893 1 52308 32.627 29.133 1 0.8477 0.69319 0 5536900 2815800 2721100 13141 794 5005 5130 20497 20497 GHYTEGAELVDAVLDVVR 18 0 1 Unmodified _GHYTEGAELVDAVLDVVR_ 0 0 0 P04350;B4DE77;B4DJ43;M0R278;M0R1I1;Q9BUF5;K7ESM5;B3KS31;K7EL29;K7ES63 P04350;Q9BUF5 P04350 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.6699 3 648.333812 1941.97961 74598.73 0.89263 0.00057872 -0.86715 -0.0005622 0.025474 1.6515E-05 648.333536162717 651.669569540649 132.87 0.17339 132.87 132.78 132.95 0 41 7 8 0 0 0 8.7166E-31 2 86867 119.47 119.47 1 1.5963 1.619 0 15121000 6711600 8409600 13142 1441;2004 5006 5131 20498;20499 20498 GHYTEGAELVDAVLDVVR 18 0 1 Unmodified _GHYTEGAELVDAVLDVVR_ 0 0 0 P04350;B4DE77;B4DJ43;M0R278;M0R1I1;Q9BUF5;K7ESM5;B3KS31;K7EL29;K7ES63 P04350;Q9BUF5 P04350 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.0051 3 648.333812 1941.97961 74896.09 1.08 0.00070023 -0.19571 -0.00012688 0.88434 0.00057335 648.667923136734 651.669706704686 132.81 0.18961 132.81 132.71 132.9 0 59 10 9 0 0 0 1.5719E-30 2 89019 120.63 120.63 1 1.6611 1.7874 0 25730000 9192700 16537000 13143 1441;2004 5006 5131 20500;20501 20500 GHYTEGAELVDAVLDVVR 18 0 1 Unmodified _GHYTEGAELVDAVLDVVR_ 0 0 0 P04350;B4DE77;B4DJ43;M0R278;M0R1I1;Q9BUF5;K7ESM5;B3KS31;K7EL29;K7ES63 P04350;Q9BUF5 P04350 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.0013 2 971.997079 1941.97961 59332.39 0.59392 0.00057729 0.048936 4.7566E-05 0.64286 0.00062486 971.996803928974 977.504287952014 132.8 0.20947 132.8 132.65 132.86 0 28 12 5 0 0 0 3.2614E-05 1 89025 64.65 64.65 1 1.4307 1.424 0 7181700 2984100 4197700 13144 1441;2004 5006 5131 20502 20502 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.6671 3 653.66545 1957.97452 74662.29 0.9218 0.00060255 0.032762 2.1416E-05 0.95456 0.00062397 653.999675585464 657.336092264648 120.42 1.4403 120.42 119.94 121.38 -7.6294E-06 581 101 9 0 0 0 3.1376E-06 3 77452 79.837 79.837 1 1.5675 1.6757 0 44957000 18376000 26582000 13145 1452;1660;1723;502 5007 5132 20503;20504;20505 20504 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.3361 3 653.66545 1957.97452 74405.25 0.9408 0.00061497 -0.16122 -0.00010538 0.77958 0.00050958 653.665207087761 657.001377825263 123.74 2.557 123.74 121.38 123.94 0 880 183 8 0 0 0 1.8664E-08 6 79854 71.601 71.601 1 1.5773 1.7423 0 55991000 20376000 35615000 13146 1452;1660;1723;502 5007 5132 20506;20507;20508;20509;20510;20511 20510 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 984.9986 2 979.994537 1957.97452 61411 0.52167 0.00051124 -0.39856 -0.00039059 0.12311 0.00012065 980.494438083389 985.50021834473 123.08 0.88361 123.08 122.51 123.39 -7.6294E-06 205 67 5 0 0 0 9.5292E-17 1 79700 121.45 121.45 1 1.3234 1.3185 0 8624600 3441500 5183000 13147 1452;1660;1723;502 5007 5132 20512 20512 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.4946 2 979.994537 1957.97452 61411.01 0.44451 0.00043562 -0.18258 -0.00017893 0.26193 0.00025669 980.495617999614 984.998009279351 123.55 0.46623 123.55 123.28 123.74 0 111 33 5 0 0 0 6.066E-05 1 80158 70.412 70.412 1 1.3856 1.4536 0 11063000 4577000 6485800 13148 1452;1660;1723;502 5007 5132 20513 20513 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.3365 3 653.66545 1957.97452 74614.02 0.89445 0.00058467 -0.08121 -5.3084E-05 0.81324 0.00053158 653.999621610058 657.001434128428 124.16 1.1598 124.16 123.76 124.92 0 510 80 10 0 0 0 5.7959E-09 3 80446 89.358 85.006 1 1.5584 1.6502 0 41295000 15920000 25375000 13149 1452;1660;1723;502 5007 5132 20514;20515;20516 20514 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.0021 3 653.66545 1957.97452 74654.72 1.0951 0.00071581 0.31252 0.00020428 1.4076 0.00092009 653.999688543029 657.336754863814 125.51 1.5728 125.51 125.16 126.73 0 359 112 9 0 0 0 7.4423E-06 4 81593 67.685 67.685 1 1.4999 1.5233 0 15031000 6516900 8513700 13150 1452;1660;1723;502 5007 5132 20517;20518;20519;20520 20517 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 984.9983 2 979.994537 1957.97452 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.54 1 124.54 124.04 125.04 0 0 0 0 0.002836 1 80884 53.448 38.417 1 13151 1452;1660;1723;502 5007 5132 20521 20521 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.6664 3 653.66545 1957.97452 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.62 1 126.62 126.12 127.12 0 0 0 0 0.022554 1 82407 33.308 28.76 1 13152 1452;1660;1723;502 5007 5132 20522 20522 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.0021 3 653.66545 1957.97452 74848.01 0.9303 0.0006081 -0.029262 -1.9128E-05 0.90104 0.00058898 653.999691453521 657.001439487361 119.68 1.3436 119.68 119.13 120.48 -7.6294E-06 673 97 12 0 0 0 9.2065E-06 2 79163 59.502 50.793 1 1.527 1.738 0 111980000 41140000 70845000 13153 1452;1660;1723;502 5007 5132 20523;20524 20524 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 984.9996 2 979.994537 1957.97452 60472.75 0.42227 0.00041383 -0.032932 -3.2273E-05 0.38934 0.00038155 980.4955790807 984.998687861918 119.65 0.68556 119.65 119.3 119.99 0 206 49 7 0 0 0 7.286E-12 3 78887 107.14 107.14 1 1.7584 1.8103 0 21348000 9500900 11847000 13154 1452;1660;1723;502 5007 5132 20525;20526;20527 20527 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.3367 3 653.66545 1957.97452 74739.52 0.89921 0.00058778 -0.35995 -0.00023529 0.53926 0.00035249 653.665061717361 657.001268575935 122.38 1.8093 122.38 120.62 122.43 7.6294E-06 691 126 8 0 0 0 3.7387E-12 2 80736 107.82 107.82 1 1.5927 1.8342 0 73738000 30102000 43636000 13155 1452;1660;1723;502 5007 5132 20528;20529 20529 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 984.9991 2 979.994537 1957.97452 61797.31 0.41056 0.00040235 0.056645 5.5512E-05 0.46721 0.00045786 979.994433064297 985.500339161763 122.38 1.0718 122.38 121.36 122.43 -7.6294E-06 208 79 5 0 0 0 1.006E-11 1 80797 105.03 105.03 1 1.3429 1.4562 0 27783000 10720000 17064000 13156 1452;1660;1723;502 5007 5132 20530 20530 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.666 3 653.66545 1957.97452 74549.38 0.9687 0.00063321 -0.14594 -9.5394E-05 0.82277 0.00053781 653.999592018066 657.001386648872 122.64 0.77882 122.64 122.41 123.19 0 253 60 9 0 0 0 1.8659E-08 2 81254 93.768 93.768 1 1.5199 1.7391 0 86864000 30659000 56206000 13157 1452;1660;1723;502 5007 5132 20531;20532 20531 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 984.9987 2 979.994537 1957.97452 61100.05 0.51635 0.00050602 -0.44153 -0.00043269 0.074821 7.3324E-05 980.4953664799 984.998866906956 122.66 0.6005 122.66 122.42 123.02 0 226 47 9 0 0 0 6.6217E-12 1 81394 107.65 107.65 1 1.3956 1.5034 0 25880000 12287000 13593000 13158 1452;1660;1723;502 5007 5132 20533 20533 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 980.4963 2 979.994537 1957.97452 61015.86 0.70597 0.00069185 -0.7317 -0.00071706 -0.025728 -2.5214E-05 980.495994804387 984.998321046291 122.98 0.5831 122.98 122.78 123.36 7.6294E-06 154 43 6 0 0 0 0.0066615 2 81674 43.382 38.491 1 1.3102 1.3146 0 17411000 6133700 11278000 13159 1452;1660;1723;502 5007 5132 20534;20535 20535 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.3364 3 653.66545 1957.97452 74739.55 1.0269 0.00067124 -0.029095 -1.9018E-05 0.9978 0.00065222 653.665371327656 657.001475179472 122.99 1.8033 122.99 122.76 124.57 0 771 126 12 0 0 0 9.6238E-13 3 81947 105.53 105.53 1 1.5463 1.7605 0 109730000 42107000 67627000 13160 1452;1660;1723;502 5007 5132 20536;20537;20538 20536 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 979.9954 2 979.994537 1957.97452 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.11 1 122.11 121.61 122.61 0 0 0 0 0.00489 1 80951 50.088 37.107 1 13161 1452;1660;1723;502 5007 5132 20539 20539 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.0019 3 653.66545 1957.97452 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.92 1 124.92 124.42 125.42 0 0 0 0 0.045221 1 83166 43.208 36.435 1 13162 1452;1660;1723;502 5007 5132 20540 20540 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.6659 3 653.66545 1957.97452 74251.05 0.81818 0.00053482 0.079631 5.2052E-05 0.89781 0.00058687 653.66555315678 657.001530936647 131.55 0.89606 131.55 131.2 132.1 0 327 39 12 0 0 0 1.7688E-07 2 79784 87.088 87.088 1 1.1716 1.0097 0 67011000 31483000 35528000 13163 1452;1660;1723;502 5007 5132 20541;20542 20542 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 984.9997 2 979.994537 1957.97452 60324.95 0.24798 0.00024301 0.28913 0.00028335 0.5371 0.00052636 980.496449489428 985.500470134103 131.57 0.51556 131.57 131.28 131.79 0 105 23 6 0 0 0 1.1187E-05 1 79883 79.089 79.089 1 1.2137 1.003 0 11408000 5086200 6321700 13164 1452;1660;1723;502 5007 5132 20543 20543 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;Q6LC01;Q5ST81;B7ZAK1;B4DMJ5;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;A5D907;A5D906;A1L195;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;Q13885;Q9BV28 Q5JP53 TUBB;TUBB3;TUBB2C;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.3369 3 653.66545 1957.97452 73786.98 0.94383 0.00061695 -0.080188 -5.2416E-05 0.86365 0.00056454 653.999654737965 657.001443976125 131.28 0.82947 131.28 130.92 131.75 0 239 34 10 0 0 0 4.0239E-64 2 78655 137.61 137.61 1 1.2182 1.063 0 64353000 30121000 34232000 13165 1452;1660;1723;502 5007 5132 20544;20545 20545 GIAFPTSISVNNCVCHFSPLK 21 1 0 Unmodified _GIAFPTSISVNNCVCHFSPLK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;F8VR77;H0YIN7;F8W0A3;F8VZ69 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.0599 3 783.389046 2347.14531 NaN NaN NaN -0.22602 -0.00017707 NaN NaN NaN NaN 111 0.34162 111 110.77 111.11 0 0 0 0 1.2705E-06 1 69743 61.703 53.344 1 NaN NaN 0 11906000 0 11906000 13166 328 5008 5133 20546 20546 GIAFPTSISVNNCVCHFSPLK 21 1 0 Unmodified _GIAFPTSISVNNCVCHFSPLK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;F8VR77;H0YIN7;F8W0A3;F8VZ69 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.0587 3 783.389046 2347.14531 NaN NaN NaN -0.072266 -5.6612E-05 NaN NaN NaN NaN 110.3 0.3452 110.3 110.11 110.45 0 0 0 0 6.688E-13 1 70962 83.213 75.68 1 NaN NaN 0 7763400 0 7763400 13167 328 5008 5133 20547 20547 GIAFPTSISVNNCVCHFSPLK 21 1 0 Unmodified _GIAFPTSISVNNCVCHFSPLK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;F8VR77;H0YIN7;F8W0A3;F8VZ69 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 786.0616 3 783.389046 2347.14531 67899.54 0.84966 0.00066561 0.55919 0.00043806 1.4088 0.0011037 784.057777189617 786.060601552233 121.83 0.29928 121.83 121.67 121.97 7.6294E-06 52 15 5 0 0 0 0.0011541 1 72562 29.476 29.476 1 1.4815 1.1635 0 3948800 1646800 2302100 13168 328 5008 5133 20548 20548 GIAHGAVVK 9 1 0 Unmodified _GIAHGAVVK_ 0 0 0 A7E234;Q9H582;Q9NZF0;A0A087WZL9;Q569I6 A7E234 A7E234 ZNF644 Zinc finger protein 644 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.2598 2 426.25852 850.502486 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.776 1 18.776 18.276 19.276 0 0 0 0 0.010529 1 5654 63.148 34.725 1 13169 693 5009 5134 20549 20549 GIALWGGEK 9 1 0 Unmodified _GIALWGGEK_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q86UM1;C9JQN7 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.7625 2 465.75581 929.497067 89103.72 0.17415 8.1113E-05 -0.78044 -0.0003635 -0.60629 -0.00028238 465.755503995232 469.762383103446 72.831 0.31372 72.831 72.707 73.02 0 57 23 4 0 0 0 0.010772 1 42684 58.981 36.85 1 1.5883 1.65 0 12485000 4520900 7963800 13170 241 5010 5135 20550 20550 GIALWGGEK 9 1 0 Unmodified _GIALWGGEK_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q86UM1;C9JQN7 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.7627 2 465.75581 929.497067 89760.04 0.002957 1.3772E-06 -0.51141 -0.00023819 -0.50846 -0.00023682 465.755567980658 469.762729336087 71.458 0.2188 71.458 71.352 71.571 0 57 16 8 0 0 0 0.0066419 1 42834 63.673 40.782 1 1.4335 1.5213 0 20466000 8322700 12143000 13171 241 5010 5135 20551 20551 GIAYIEFK 8 1 0 Unmodified _GIAYIEFK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.7608 2 470.760561 939.506569 88179.76 0.15159 7.1361E-05 0.35931 0.00016915 0.5109 0.00024051 470.760645519207 474.767766530913 83.414 0.89838 83.414 83.176 84.074 0 374 76 7 0 0 0 0.0077064 2 49879 81.784 41.681 1 1.0451 1.2225 0 284610000 132200000 152410000 13172 151 5011 5136 20552;20553 20553 GIAYIEFK 8 1 0 Unmodified _GIAYIEFK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 948.4299 1 940.513845 939.506569 63407.77 0.42515 0.00039986 0.63264 0.00059501 1.0578 0.00099486 940.514674777788 948.528515566341 83.413 0.46729 83.413 83.246 83.713 7.6294E-06 121 38 4 0 0 0 0.053691 1 50080 87.323 52.515 1 1.1256 1.1321 0 18551000 7672500 10878000 13173 151 5011 5136 20554 20554 GIAYIEFK 8 1 0 Unmodified _GIAYIEFK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.7607 2 470.760561 939.506569 88863.95 0.25269 0.00011895 0.10939 5.1495E-05 0.36207 0.00017045 470.760477858484 474.767666975066 82.333 0.95814 82.333 82.079 83.037 0 419 80 8 0 0 0 0.0068997 2 50300 85.265 54.653 1 1.1145 1.2992 0 256330000 123180000 133150000 13174 151 5011 5136 20555;20556 20555 GIAYIEFK 8 1 0 Unmodified _GIAYIEFK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 474.7681 2 470.760561 939.506569 87921.02 0.41615 0.00019591 0.37292 0.00017556 0.78907 0.00037146 470.760603839542 474.767913023487 95.417 0.94502 95.417 95.11 96.055 0 302 66 7 0 0 0 0.013558 2 53408 65.038 41.485 1 0.56786 0.44025 0 13740000 8984500 4755300 13175 151 5011 5136 20557;20558 20558 GIAYIEFK 8 1 0 Unmodified _GIAYIEFK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 474.768 2 470.760561 939.506569 88335.17 0.25012 0.00011775 0.37122 0.00017475 0.62134 0.0002925 470.760594284048 474.767899912183 95.281 0.95187 95.281 94.88 95.832 0 276 66 7 0 0 0 0.024726 2 52465 55.676 36.04 1 0.57335 0.47373 0 11644000 7851500 3792400 13176 151 5011 5136 20559;20560 20560 GICEMELLDGK 11 1 0 Oxidation (M) _GICEM(ox)ELLDGK_ GICEM(1)ELLDGK GICEM(94.69)ELLDGK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8041 2 640.796688 1279.57882 75430.27 0.54878 0.00035166 -0.57528 -0.00036864 -0.026501 -1.6982E-05 640.796304403093 644.803513782484 66.062 0.96697 66.062 65.891 66.858 0 356 82 6 0 0 0 7.5769E-05 2 38042 94.692 90.675 1 1.1355 1.2202 0 39099000 19186000 19914000 13177 908 5012 5137 20561;20562 20561 738 GICEMELLDGK 11 1 0 Oxidation (M) _GICEM(ox)ELLDGK_ GICEM(1)ELLDGK GICEM(90.15)ELLDGK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.7963 2 640.796688 1279.57882 76685.53 0.49409 0.00031661 -0.83502 -0.00053508 -0.34092 -0.00021846 640.796128073814 644.803273185918 64.951 1.0865 64.951 64.689 65.776 0 328 89 6 0 0 0 0.00012658 3 38425 90.15 90.15 1 0.98386 1.0308 0 19455000 11287000 8168000 13178 908 5012 5137 20563;20564;20565 20564 738 GICEMELLDGK 11 1 0 Unmodified _GICEMELLDGK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8065 2 632.799231 1263.58391 78698.7 0.57117 0.00036144 0.22737 0.00014388 0.79854 0.00050532 633.301198089398 636.806443438897 99.416 0.51207 99.416 99.016 99.528 0 89 31 4 0 0 0 0.043879 1 55397 35.541 35.541 1 1.6991 1.3734 0 2977400 1315000 1662400 13179 908 5012 5138 20566 20566 GIDEGPEGLK 10 1 0 Unmodified _GIDEGPEGLK_ 0 0 0 Q8N335;C9K0P5;C9JFA7 Q8N335 Q8N335 GPD1L Glycerol-3-phosphate dehydrogenase 1-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.766 2 507.758746 1013.50294 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.838 1 39.838 39.338 40.338 0 0 0 0 0.046562 1 20726 44.753 28.459 1 13180 1906 5013 5139 20567 20567 GIDIHGVPYVINVTLPDEK 19 1 0 Unmodified _GIDIHGVPYVINVTLPDEK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.7149 3 693.708878 2078.10481 74119.41 0.67788 0.00047025 0.01753 1.2161E-05 0.69541 0.00048241 693.708844680422 696.714387764061 116.13 0.60007 116.13 115.85 116.45 7.6294E-06 248 37 10 0 0 0 0.00010482 2 74051 43.326 43.326 1 1.2298 1.3835 0 71926000 34594000 37332000 13181 452 5014 5140 20568;20569 20568 GIDIHGVPYVINVTLPDEK 19 1 0 Unmodified _GIDIHGVPYVINVTLPDEK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.7151 3 693.708878 2078.10481 73616.1 0.89637 0.00062182 -0.095691 -6.6381E-05 0.80067 0.00055543 694.043004649102 696.71427502031 115.44 0.55495 115.44 115.26 115.81 0 232 35 10 0 0 0 4.3144E-06 1 75365 68.625 68.625 1 1.2657 1.4145 0 96742000 39247000 57496000 13182 452 5014 5140 20570 20570 GIDIHGVPYVINVTLPDEK 19 1 0 Unmodified _GIDIHGVPYVINVTLPDEK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.0435 3 693.708878 2078.10481 72606.92 0.44288 0.00030723 0.55227 0.00038312 0.99516 0.00069035 694.043447306496 696.381054817561 127.32 0.51173 127.32 127.11 127.62 0 146 20 11 0 0 0 0.00016121 3 76681 34.586 34.586 1 1.4602 1.1987 0 37637000 15434000 22203000 13183 452 5014 5140 20571;20572;20573 20572 GIDIHGVPYVINVTLPDEK 19 1 0 Unmodified _GIDIHGVPYVINVTLPDEK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.7148 3 693.708878 2078.10481 72890.44 0.59342 0.00041166 0.31071 0.00021554 0.90413 0.0006272 694.043214606005 696.714455983823 127.13 0.49985 127.13 126.95 127.45 0 108 20 9 0 0 0 1.1421E-05 2 75638 52.298 52.298 1 1.3592 1.092 0 17238000 7101800 10136000 13184 452 5014 5140 20574;20575 20574 GIDSDDVQDNSQLK 14 1 0 Unmodified _GIDSDDVQDNSQLK_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.3546 2 767.354999 1532.69544 72404.01 0.78134 0.00059957 -0.020661 -1.5854E-05 0.76068 0.00058371 767.354068164982 771.362431639919 39.302 0.36957 39.302 39.126 39.495 0 103 28 6 0 0 0 0.00023278 1 20355 79.82 72.558 1 1.6235 1.6837 0 11300000 4778000 6521800 13185 1984 5015 5141 20576 20576 GIDVQQVSLVINYDLPTNR 19 0 1 Unmodified _GIDVQQVSLVINYDLPTNR_ 0 0 0 A8K7F6;P60842;A8K088;B4DNH2;E7EQG2;Q14240;Q9NZE6;Q96B07 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1078.0774 2 1072.57094 2143.12733 58630.26 0.25716 0.00027583 0.00051574 5.5316E-07 0.25768 0.00027638 1073.07253322539 1077.57510702429 120.95 0.5233 120.95 120.71 121.24 0 302 36 12 0 0 0 1.5267E-39 2 77973 153.09 136.43 1 1.8696 2.1041 0 96398000 35980000 60418000 13186 770 5016 5142 20577;20578 20577 GIDVQQVSLVINYDLPTNR 19 0 1 Unmodified _GIDVQQVSLVINYDLPTNR_ 0 0 0 A8K7F6;P60842;A8K088;B4DNH2;E7EQG2;Q14240;Q9NZE6;Q96B07 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1072.571 2 1072.57094 2143.12733 58347.76 0.57231 0.00061384 0.15471 0.00016594 0.72702 0.00077978 1073.07262587482 1078.07657551711 120.57 0.59983 120.57 120.29 120.89 0 272 42 9 0 0 0 5.6775E-23 2 79598 135.02 135.02 1 1.8374 2.0919 0 109760000 39224000 70532000 13187 770 5016 5142 20579;20580 20580 GIDVQQVSLVINYDLPTNR 19 0 1 Unmodified _GIDVQQVSLVINYDLPTNR_ 0 0 0 A8K7F6;P60842;A8K088;B4DNH2;E7EQG2;Q14240;Q9NZE6;Q96B07 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1077.5756 2 1072.57094 2143.12733 58266.07 0.31927 0.00034243 0.15272 0.00016381 0.47199 0.00050624 1073.07268874624 1077.57528113462 133.49 0.51617 133.49 133.25 133.77 0 156 21 12 0 0 0 4.428E-12 2 81239 106.3 90.359 1 1.4592 1.2234 0 25536000 11270000 14266000 13188 770 5016 5142 20581;20582 20581 GIDVQQVSLVINYDLPTNR 19 0 1 Unmodified _GIDVQQVSLVINYDLPTNR_ 0 0 0 A8K7F6;P60842;A8K088;B4DNH2;E7EQG2;Q14240;Q9NZE6;Q96B07 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1078.077 2 1072.57094 2143.12733 59240.39 0.54265 0.00058203 -0.0079572 -8.5347E-06 0.53469 0.0005735 1073.07218024558 1077.5753147775 133.25 0.44537 133.25 133.09 133.54 0 102 16 9 0 0 0 6.1956E-06 2 80230 78.69 66.524 1 1.315 1.0742 0 13014000 5861200 7152400 13189 770 5016 5142 20583;20584 20583 GIDYDFPSLILQK 13 1 0 Unmodified _GIDYDFPSLILQK_ 0 0 0 Q9BYG3;C9J808;C9J6C5 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.9042 2 754.903399 1507.79225 68346.88 0.89706 0.0006772 1.0819 0.00081677 1.979 0.001494 754.904838749436 758.910685014559 120.76 0.86078 120.76 120.46 121.32 0 384 60 10 0 0 0 5.0152E-06 3 77770 106.37 106.37 1 0.92498 1.0535 0 171030000 85867000 85159000 13190 2019 5017 5143 20585;20586;20587 20585 GIDYDFPSLILQK 13 1 0 Unmodified _GIDYDFPSLILQK_ 0 0 0 Q9BYG3;C9J808;C9J6C5 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.9114 2 754.903399 1507.79225 68086.12 0.955 0.00072093 0.9757 0.00073656 1.9307 0.0014575 754.904688162107 758.910690178666 120.28 0.91836 120.28 119.97 120.89 7.6294E-06 370 66 10 0 0 0 3.4281E-05 3 79334 98.04 98.04 1 0.90386 1.0446 0 197670000 98014000 99661000 13191 2019 5017 5143 20588;20589;20590 20589 GIDYDFPSLILQK 13 1 0 Unmodified _GIDYDFPSLILQK_ 0 0 0 Q9BYG3;C9J808;C9J6C5 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 758.9127 2 754.903399 1507.79225 69418.73 1.1039 0.00083332 -0.24156 -0.00018235 0.86232 0.00065097 754.903469162061 758.910250202096 133.07 1.1947 133.07 132.77 133.97 1.5259E-05 286 52 10 0 0 0 5.6819E-06 2 80877 105.52 105.52 1 1.3244 1.134 0 73390000 31941000 41449000 13192 2019 5017 5143 20591;20592 20591 GIDYDFPSLILQK 13 1 0 Unmodified _GIDYDFPSLILQK_ 0 0 0 Q9BYG3;C9J808;C9J6C5 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.904 2 754.903399 1507.79225 69464.7 1.1448 0.00086425 -0.10352 -7.8151E-05 1.0413 0.0007861 754.903668076143 758.910307241921 132.77 1.0233 132.77 132.48 133.5 0 264 43 10 0 0 0 0.00013323 2 79812 89.548 89.548 1 1.3412 1.1379 0 68198000 29271000 38927000 13193 2019 5017 5143 20593;20594 20594 GIECDIR 7 0 1 Unmodified _GIECDIR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.7119 2 431.708002 861.401452 90221.72 -0.15496 -6.6897E-05 0.2357 0.00010175 0.080737 3.4855E-05 431.708105234913 436.71215878783 30.085 0.66084 30.085 29.871 30.532 0 216 54 7 0 0 0 0.026656 1 14619 75.311 18.8 1 1.5789 1.809 0 171700000 68579000 103120000 13194 1569 5018 5144 20595 20595 GIECDIR 7 0 1 Unmodified _GIECDIR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 436.7118 2 431.708002 861.401452 91054.75 -0.16552 -7.1458E-05 1.5033 0.000649 1.3378 0.00057754 431.708029982613 436.712031143869 34.701 1.2006 34.701 34.423 35.624 0 381 102 10 0 0 0 0.034211 2 15295 62.714 18.103 1 2.9251 2.5126 0 43469000 11675000 31794000 13195 1569 5018 5144 20596;20597 20596 GIECDIR 7 0 1 Unmodified _GIECDIR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 436.7121 2 431.708002 861.401452 89647.8 -0.00036893 -1.5927E-07 1.1554 0.00049879 1.155 0.00049863 431.70803343072 436.711948855928 34.81 1.2977 34.81 34.497 35.794 0 369 107 10 0 0 0 0.034211 1 14882 62.714 18.103 1 3.076 2.6831 0 41648000 10576000 31072000 13196 1569 5018 5144 20598 20598 GIEEEEILPGFILCDPNNLCHSGR 24 0 1 Unmodified _GIEEEEILPGFILCDPNNLCHSGR_ 0 0 0 H3BR35;Q7KZX8;B2RCT6;A8K2W7;P15170 H3BR35 H3BR35 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 927.4405 3 923.770543 2768.2898 62855.86 0.8799 0.00081282 -0.58139 -0.00053707 0.29851 0.00027575 924.436434830017 927.440563049588 119.66 0.87803 119.66 119.33 120.21 -7.6294E-06 235 59 8 0 0 0 5.2075E-07 1 76929 48.872 48.872 1 3.8169 3.8684 0 28191000 6335800 21855000 13197 715 5019 5145 20599 20599 GIEEEEILPGFILCDPNNLCHSGR 24 0 1 Unmodified _GIEEEEILPGFILCDPNNLCHSGR_ 0 0 0 H3BR35;Q7KZX8;B2RCT6;A8K2W7;P15170 H3BR35 H3BR35 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 927.4411 3 923.770543 2768.2898 62943.82 0.67554 0.00062404 -0.29367 -0.00027128 0.38187 0.00035276 924.104737360904 927.441090800839 119.12 0.49773 119.12 118.88 119.37 0 209 33 10 0 0 0 3.5144E-09 1 78369 52.483 52.483 1 2.7993 3.0473 0 29015000 6810000 22205000 13198 715 5019 5145 20600 20600 GIEGTVPYVTTDYNFK 16 1 0 Unmodified _GIEGTVPYVTTDYNFK_ 0 0 0 Q5SY16 Q5SY16 Q5SY16 NOL9 Polynucleotide 5-hydroxyl-kinase NOL9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 906.4551 2 902.443617 1802.87268 NaN NaN NaN -0.38768 -0.00034986 NaN NaN NaN NaN 101.45 0.45592 101.45 101.24 101.7 0 0 0 0 0.0038892 1 62373 55.04 32.462 1 NaN NaN 0 7503000 0 7503000 13199 1818 5020 5146 20601 20601 GIEILLEK 8 1 0 Unmodified _GIEILLEK_ 0 0 0 Q15397;B2RDG4;S4R3K8 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.7885 2 457.781493 913.548434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.167 1 89.167 88.667 89.667 0 0 0 0 0.043538 1 55023 56.721 7.9654 1 13200 1761 5021 5147 20602 20602 GIEILLEK 8 1 0 Unmodified _GIEILLEK_ 0 0 0 Q15397;B2RDG4;S4R3K8 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 461.7883 2 457.781493 913.548434 88720.37 -0.089937 -4.1172E-05 -0.3445 -0.00015771 -0.43444 -0.00019888 457.781012522316 461.788628019085 102.59 0.62665 102.59 102.25 102.88 0 128 42 4 0 0 0 0.053151 1 57240 42.599 6.2034 1 0.8516 0.69561 0 4725900 2563700 2162200 13201 1761 5021 5147 20603 20603 GIEKPPFELPDFIK 14 2 0 Unmodified _GIEKPPFELPDFIK_ 0 0 1 Q13435;Q7Z3K9;E9PPJ0 Q13435 Q13435 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.31 3 543.967741 1628.88139 83324.34 0.43853 0.00023855 -0.12134 -6.6005E-05 0.31719 0.00017254 544.302152950192 549.31028275876 113.79 0.50303 113.79 113.54 114.04 0 160 36 6 0 0 0 0.0040799 1 73819 38.028 38.028 1 1.0769 1.2269 0 9920500 4453800 5466700 13202 1713 5022 5148 20604 20604 GIEQAVQSHAVAEEEAR 17 0 1 Unmodified _GIEQAVQSHAVAEEEAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.3041 3 608.634261 1822.88095 75465.37 0.51598 0.00031404 -0.17507 -0.00010655 0.34091 0.00020749 608.634084865333 611.969864775347 51.08 0.51147 51.08 50.844 51.356 0 242 47 8 0 0 0 1.3963E-06 1 28171 86.8 86.8 1 0.85877 0.95714 0 83513000 40710000 42802000 13203 1774;1029;1128 5023 5149 20605 20605 GIEQAVQSHAVAEEEAR 17 0 1 Unmodified _GIEQAVQSHAVAEEEAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 912.9483 2 912.447754 1822.88095 64293.78 0.53376 0.00048703 -0.072044 -6.5736E-05 0.46172 0.0004213 912.948808746481 917.953719998433 49.645 0.28514 49.645 49.509 49.794 -3.8147E-06 88 21 6 0 0 0 7.581E-18 3 27931 145.43 145.43 1 0.80593 0.88078 0 36552000 18312000 18240000 13204 1774;1029;1128 5023 5149 20606;20607;20608 20608 GIEQAVQSHAVAEEEAR 17 0 1 Unmodified _GIEQAVQSHAVAEEEAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.9684 3 608.634261 1822.88095 76743.97 0.49087 0.00029876 -0.30019 -0.0001827 0.19068 0.00011606 608.968302344695 611.969857350364 49.638 0.57036 49.638 49.418 49.988 0 220 46 10 0 0 0 8.9814E-26 2 27946 144.3 144.3 1 1.0093 1.1542 0 157190000 75599000 81590000 13205 1774;1029;1128 5023 5149 20609;20610 20610 GIEQAVQSHAVAEEEARK 18 1 1 Unmodified _GIEQAVQSHAVAEEEARK_ 0 0 1 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3328 3 651.332582 1950.97592 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.044 1 42.044 41.544 42.544 0 0 0 0 0.0053192 1 22264 32.55 14.447 1 13206 1774;1029;1128 5024 5150 20611 20611 GIEQAVQSHAVAEEEARK 18 1 1 Unmodified _GIEQAVQSHAVAEEEARK_ 0 0 1 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3329 3 651.332582 1950.97592 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.055 1 42.055 41.555 42.555 0 0 0 0 0.00018729 1 22272 45.876 27.418 1 13207 1774;1029;1128 5024 5150 20612 20612 GIEQAVQSHAVAEEEARK 18 1 1 Unmodified _GIEQAVQSHAVAEEEARK_ 0 0 1 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.3416 3 651.332582 1950.97592 75072.38 0.72182 0.00047014 0.41321 0.00026914 1.135 0.00073928 651.667329499038 657.674330367447 40.556 0.36851 40.556 40.386 40.755 0 109 28 6 0 0 0 1.1888E-05 2 21662 60.564 60.564 1 1.1024 1.2705 0 28450000 13753000 14697000 13208 1774;1029;1128 5024 5150 20613;20614 20614 GIFEPFGR 8 0 1 Unmodified _GIFEPFGR_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;A0A0U1RQW2;H0Y4X3 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7474 2 461.742702 921.470852 97721.7 0.31292 0.00014449 0.92746 0.00042825 1.2404 0.00057274 461.743151425726 466.747417793179 89.042 0.35005 89.042 88.75 89.101 0 75 24 4 0 0 0 0.039273 1 53622 55.504 35.658 1 0.78861 0.79966 0 28657000 15115000 13542000 13209 588 5025 5151 20615 20615 GIFNGFSVTLK 11 1 0 Unmodified _GIFNGFSVTLK_ 0 0 0 F8VVM2;Q8NCF7;Q53HC3;B2RE88;A0A024RBE8;A0A024RBH9;Q00325;F8VZL5;F8VWR4;F8VWQ0 F8VVM2 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8378 2 591.829506 1181.64446 82399.81 1.2668 0.00074975 0.19702 0.0001166 1.4639 0.00086636 591.829315568508 595.836695381081 111.51 0.40636 111.51 111.37 111.78 0 77 28 4 0 0 0 0.0010483 1 70208 82.749 70.222 1 1.5207 1.6057 0 16321000 5921300 10400000 13210 335 5026 5152 20616 20616 GIFNGFSVTLK 11 1 0 Unmodified _GIFNGFSVTLK_ 0 0 0 F8VVM2;Q8NCF7;Q53HC3;B2RE88;A0A024RBE8;A0A024RBH9;Q00325;F8VZL5;F8VWR4;F8VWQ0 F8VVM2 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8369 2 591.829506 1181.64446 81563.48 0.66409 0.00039303 -0.53835 -0.00031861 0.12574 7.4414E-05 591.829358966984 596.337276956867 110.91 0.44981 110.91 110.71 111.16 0 106 33 5 0 0 0 0.0010483 2 71447 82.749 74.217 1 1.7227 1.8023 0 10391000 3457400 6933800 13211 335 5026 5152 20617;20618 20617 GIFNGFSVTLK 11 1 0 Unmodified _GIFNGFSVTLK_ 0 0 0 F8VVM2;Q8NCF7;Q53HC3;B2RE88;A0A024RBE8;A0A024RBH9;Q00325;F8VZL5;F8VWR4;F8VWQ0 F8VVM2 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.8369 2 591.829506 1181.64446 NaN NaN NaN 0.1187 7.025E-05 NaN NaN NaN NaN 122.71 0.3738 122.71 122.51 122.88 -7.6294E-06 0 0 0 0.046279 1 72279 45.368 24.068 1 NaN NaN 0 629010 0 629010 13212 335 5026 5152 20619 20619 GIFTSEIGTK 10 1 0 Unmodified _GIFTSEIGTK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.7851 2 526.784764 1051.55498 83670.16 0.37107 0.00019548 0.25022 0.00013181 0.6213 0.00032729 526.784759130258 530.792113158079 68.212 1.041 68.212 67.894 68.935 0 324 91 5 0 0 0 0.00083563 2 39664 80.455 58.068 1 0.67724 0.71534 0 31012000 16269000 14743000 13213 1665 5027 5153 20620;20621 20621 GIFTSEIGTK 10 1 0 Unmodified _GIFTSEIGTK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.7846 2 526.784764 1051.55498 83271.83 0.30689 0.00016167 0.21699 0.00011431 0.52388 0.00027597 526.784726768798 530.791980527109 67.066 0.90923 67.066 66.614 67.523 -7.6294E-06 359 76 6 0 0 0 0.0010045 2 39590 77.732 61.529 1 0.69157 0.75097 0 39275000 23007000 16268000 13214 1665 5027 5153 20622;20623 20622 GIFTSEIGTK 10 1 0 Unmodified _GIFTSEIGTK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.7849 2 526.784764 1051.55498 NaN NaN NaN 0.3545 0.00018674 NaN NaN NaN NaN 78.073 0.97181 78.073 77.675 78.647 0 0 0 0 0.015301 1 41813 57.859 48.078 1 NaN NaN 0 5873400 5873400 0 13215 1665 5027 5153 20624 20624 GIGIHHGGLLPILK 14 1 0 Unmodified _GIGIHHGGLLPILK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.3007 3 475.629394 1423.86635 88234.28 0.45718 0.00021745 -0.34666 -0.00016488 0.11052 5.2568E-05 475.629331662101 478.300465613451 96.141 0.56437 96.141 95.889 96.454 0 175 35 6 0 0 0 0.0023823 1 53937 39.878 31.702 1 0.87699 0.6928 0 5231000 2240400 2990600 13216 1563 5028 5154 20625 20625 GIGLAIVR 8 0 1 Unmodified _GIGLAIVR_ 0 0 0 E9PQ63;A8MTM1;P16152 E9PQ63 E9PQ63 CBR1 Carbonyl reductase [NADPH] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 404.767 2 399.763438 797.512323 NaN NaN NaN -0.068391 -2.734E-05 NaN NaN NaN NaN 78.017 0.47287 78.017 77.866 78.339 7.6294E-06 0 0 0 0.017314 1 47320 67.035 18.861 1 NaN NaN 0 3986000 0 3986000 13217 795 5029 5155 20626 20626 GIGMGNIGPAGMGMEGIGFGINK 23 1 0 3 Oxidation (M) _GIGM(ox)GNIGPAGM(ox)GM(ox)EGIGFGINK_ GIGM(1)GNIGPAGM(1)GM(1)EGIGFGINK GIGM(63.19)GNIGPAGM(63.19)GM(63.19)EGIGFGINK 0 3 0 M0QZM1;P52272;A0A087X0X3;Q7KYM9;M0QYL3 M0QZM1;P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1118.0295 2 1113.52122 2225.02789 57251.45 0.16215 0.00018056 -0.49715 -0.00055359 -0.335 -0.00037303 1113.51995771136 1118.02987898689 93.417 0.55481 93.417 93.161 93.716 0 244 46 7 0 0 0 3.3991E-09 2 56526 63.185 58.294 1 4.3129 4.6493 0 34042000 7636500 26405000 13218 1599;1354 5030 5156 20627;20628 20627 1013;1014;1015 GIGMGNIGPAGMGMEGIGFGINK 23 1 0 3 Oxidation (M) _GIGM(ox)GNIGPAGM(ox)GM(ox)EGIGFGINK_ GIGM(1)GNIGPAGM(1)GM(1)EGIGFGINK GIGM(103.76)GNIGPAGM(103.76)GM(103.76)EGIGFGINK 0 3 0 M0QZM1;P52272;A0A087X0X3;Q7KYM9;M0QYL3 M0QZM1;P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1117.5298 2 1113.52122 2225.02789 57451.12 0.14225 0.0001584 -0.1484 -0.00016525 -0.006147 -6.8448E-06 1114.02333213834 1118.02990684359 92.712 0.57829 92.712 92.426 93.004 0 197 46 7 0 0 0 5.2156E-17 2 57307 103.76 96.391 1 5.0954 5.4306 0 36518000 6541200 29977000 13219 1599;1354 5030 5156 20629;20630 20629 1013;1014;1015 GIGTPPNTTPIK 12 1 0 Unmodified _GIGTPPNTTPIK_ 0 0 0 O96028;Q05CW4;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.3448 2 598.337695 1194.66084 81345.38 0.5261 0.00031478 0.03862 2.3108E-05 0.56472 0.00033789 598.337659036169 602.34468913916 60.088 0.65615 60.088 59.643 60.299 0 118 46 4 0 0 0 0.049321 1 30080 32.751 6.3666 1 2.7875 2.3078 0 1673400 314620 1358800 13220 1435 5031 5157 20631 20631 GIGYFFVLQPK 11 1 0 Unmodified _GIGYFFVLQPK_ 0 0 0 B2RB33;Q8NE26;Q5HYL0;Q9UHI8 B2RB33 B2RB33 ADAMTS1;DKFZp686E01144 A disintegrin and metalloproteinase with thrombospondin motifs 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.855 2 634.855524 1267.69649 80711.54 0.62079 0.00039411 0.034588 2.1958E-05 0.65537 0.00041607 634.855545586472 638.862654817037 117.86 0.53834 117.86 117.58 118.12 7.6294E-06 86 32 4 0 0 0 0.0013233 1 75508 68.383 68.383 1 0.49533 0.50019 0 4815600 2625900 2189700 13221 877 5032 5158 20632 20632 GIGYFFVLQPK 11 1 0 Unmodified _GIGYFFVLQPK_ 0 0 0 B2RB33;Q8NE26;Q5HYL0;Q9UHI8 B2RB33 B2RB33 ADAMTS1;DKFZp686E01144 A disintegrin and metalloproteinase with thrombospondin motifs 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.8555 2 634.855524 1267.69649 78548.52 0.6029 0.00038276 -0.11442 -7.2637E-05 0.48849 0.00031012 634.855496682808 638.862368379127 117.2 0.53601 117.2 117 117.53 7.6294E-06 89 31 4 0 0 0 0.0083951 1 76805 50.878 50.878 1 0.58335 0.58779 0 7373700 4666400 2707200 13222 877 5032 5158 20633 20633 GIHNSIGDYR 10 0 1 Unmodified _GIHNSIGDYR_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 377.8563 3 377.856233 1130.54687 98990.41 0.45265 0.00017104 -0.46955 -0.00017742 -0.016907 -6.3883E-06 377.856077615212 381.192154205594 25.434 0.33801 25.434 25.251 25.589 -1.9073E-06 57 13 6 0 0 0 0.013139 1 11017 37.696 32.383 1 0.54386 0.55339 0 20497000 12639000 7858000 13223 1486 5033 5159 20634 20634 GIIASSVGTILK 12 1 0 Unmodified _GIIASSVGTILK_ 0 0 0 P17812;B4DMB5;B7Z9C4 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.8574 2 579.858264 1157.70197 80481.23 0.41083 0.00023823 0.25623 0.00014858 0.66707 0.00038681 579.858226465981 583.865493193892 99.6 0.71645 99.6 99.23 99.946 0 235 59 6 0 0 0 0.0017293 1 60865 60.398 21.093 1 2.2837 2.4688 0 36458000 10614000 25845000 13224 1494 5034 5160 20635 20635 GIIASSVGTILK 12 1 0 Unmodified _GIIASSVGTILK_ 0 0 0 P17812;B4DMB5;B7Z9C4 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.8657 2 579.858264 1157.70197 80241.37 0.88586 0.00051367 0.13482 7.8178E-05 1.0207 0.00059185 579.858224713549 583.865373703244 98.633 0.65019 98.633 98.36 99.01 7.6294E-06 200 53 6 0 0 0 0.00059524 1 61600 68.657 21.054 1 2.2152 2.2479 0 29725000 9124000 20601000 13225 1494 5034 5160 20636 20636 GIIASSVGTILK 12 1 0 Unmodified _GIIASSVGTILK_ 0 0 0 P17812;B4DMB5;B7Z9C4 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.8653 2 579.858264 1157.70197 79865.24 0.85371 0.00049503 -0.4108 -0.0002382 0.44291 0.00025682 579.857858014214 583.864995940767 112.51 0.38892 112.51 112.38 112.76 0 69 20 5 0 0 0 0.01192 1 65393 45.368 8.0238 1 1.186 0.94065 0 4574900 1747600 2827300 13226 1494 5034 5160 20637 20637 GIIASSVGTILK 12 1 0 Unmodified _GIIASSVGTILK_ 0 0 0 P17812;B4DMB5;B7Z9C4 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.8588 2 579.858264 1157.70197 80160.6 0.53544 0.00031048 0.26524 0.0001538 0.80068 0.00046428 579.858394864964 583.865356723203 112.3 0.30462 112.3 112.11 112.41 0 68 16 6 0 0 0 0.012636 1 64321 44.863 16.137 1 1.1117 0.87652 0 2296100 1222400 1073600 13227 1494 5034 5160 20638 20638 GIIRPGTAFELLEAQAATGYVIDPIK 26 1 1 Unmodified _GIIRPGTAFELLEAQAATGYVIDPIK_ 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 915.5073 3 915.172482 2742.49562 62508.44 0.61057 0.00055878 -0.04893 -4.478E-05 0.56164 0.000514 915.506830535553 921.514200725545 132.92 0.31117 132.92 132.73 133.04 0 76 14 12 0 0 0 2.3459E-14 1 86909 86.131 86.131 1 1.6716 2.0109 0 87693000 32539000 55154000 13228 1754 5035 5161 20639 20639 GIIRPGTAFELLEAQAATGYVIDPIK 26 1 1 Unmodified _GIIRPGTAFELLEAQAATGYVIDPIK_ 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 915.5075 3 915.172482 2742.49562 63101.21 0.90574 0.00082891 0.0031959 2.9248E-06 0.90894 0.00083184 915.506710007197 921.514311633092 132.87 0.19377 132.87 132.77 132.96 0 86 10 11 0 0 0 4.7969E-28 3 89080 118.57 118.57 1 1.8068 2.133 0 131820000 47051000 84765000 13229 1754 5035 5161 20640;20641;20642 20641 GILADEDSSRPVWLK 15 1 1 Unmodified _GILADEDSSRPVWLK_ 0 0 1 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.6409 3 562.633421 1684.87843 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.714 1 84.714 84.214 85.214 0 0 0 0 0.0052641 1 50807 47.532 19.563 1 13230 587 5036 5162 20643 20643 GILADEDSSRPVWLK 15 1 1 Unmodified _GILADEDSSRPVWLK_ 0 0 1 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.3113 3 562.633421 1684.87843 81245.98 0.88989 0.00050068 0.2058 0.00011579 1.0957 0.00061647 562.633235546023 569.310493184132 83.595 0.59424 83.595 83.27 83.864 0 148 45 6 0 0 0 0.0071105 1 51244 33.008 21.909 1 1.866 2.1429 0 24951000 10191000 14760000 13231 587 5036 5162 20644 20644 GILADEDSSRPVWLK 15 1 1 Unmodified _GILADEDSSRPVWLK_ 0 0 1 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.6402 3 562.633421 1684.87843 NaN NaN NaN -0.29696 -0.00016708 NaN NaN NaN NaN 83.369 0.29115 83.369 83.185 83.477 -7.6294E-06 0 0 0 0.0050464 1 51075 55.841 37.245 1 NaN NaN 0 8037700 0 8037700 13232 587 5036 5162 20645 20645 GILDYLDNISPQQIR 15 0 1 Unmodified _GILDYLDNISPQQIR_ 0 0 0 A0A024R2G2;Q9BXW9;H7BZJ7 A0A024R2G2 A0A024R2G2 FANCD2 Fanconi anemia group D2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 878.4727 2 872.965051 1743.91555 66331.74 0.94165 0.00082203 -0.2827 -0.00024679 0.65895 0.00057524 872.965075374254 878.470306054472 111.78 0.65788 111.78 111.47 112.13 0 212 47 8 0 0 0 0.03657 1 70300 24.855 8.9649 1 0.95828 0.99014 0 23708000 11676000 12032000 13233 111 5037 5163 20646 20646 GILIPLCESGTCTLR 15 0 1 Unmodified _GILIPLCESGTCTLR_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.4418 2 845.436757 1688.85896 66153.84 0.84193 0.0007118 -0.85477 -0.00072265 -0.012836 -1.0852E-05 845.435693155734 850.941954329389 107.74 0.58685 107.74 107.44 108.03 0 193 43 8 0 0 0 0.00062128 2 67049 53.569 41.209 1 1.0065 1.0466 0 22106000 12060000 10046000 13234 1724 5038 5164 20647;20648 20648 GILIPLCESGTCTLR 15 0 1 Unmodified _GILIPLCESGTCTLR_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.9394 2 845.436757 1688.85896 65632.59 0.81849 0.00069199 -0.99462 -0.00084089 -0.17613 -0.00014891 845.436060039713 850.439379365633 107.05 0.50861 107.05 106.86 107.37 0 155 34 6 0 0 0 0.00022114 2 68304 65.5 56.987 1 0.98458 1.0607 0 25900000 13915000 11985000 13235 1724 5038 5164 20649;20650 20649 GILIPLCESGTCTLR 15 0 1 Unmodified _GILIPLCESGTCTLR_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.437 2 845.436757 1688.85896 64876.22 0.87735 0.00074174 -2.3427 -0.0019806 -1.4653 -0.0012389 845.43354403063 850.43902879736 118.77 0.73692 118.77 118.46 119.2 0 164 33 10 0 0 0 0.0067992 1 69404 36.32 36.32 1 0.9603 0.78581 0 13275000 6256800 7018400 13236 1724 5038 5164 20651 20651 GILLFGPPGTGK 12 1 0 Unmodified _GILLFGPPGTGK_ 0 0 0 A0A024R705;Q9UN37;I3L4J1;A8K5D8;A8K4G7;A0A024R2C5;O75351;B3KNH6;Q6PIW4 A0A024R705 A0A024R705 VPS4A;VPS4B;FIGNL1 Vacuolar protein sorting-associated protein 4A;Vacuolar protein sorting-associated protein 4B;Fidgetin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.3422 2 578.839874 1155.66519 81241.43 0.60188 0.00034839 0.91498 0.00052963 1.5169 0.00087802 579.341801319468 582.84712730341 104.81 0.73616 104.81 104.43 105.17 0 209 60 5 0 0 0 0.013574 1 64988 44.203 33.134 1 1.4399 1.4617 0 13559000 4693800 8865000 13237 213 5039 5165 20652 20652 GILLFGPPGTGK 12 1 0 Unmodified _GILLFGPPGTGK_ 0 0 0 A0A024R705;Q9UN37;I3L4J1;A8K5D8;A8K4G7;A0A024R2C5;O75351;B3KNH6;Q6PIW4 A0A024R705 A0A024R705 VPS4A;VPS4B;FIGNL1 Vacuolar protein sorting-associated protein 4A;Vacuolar protein sorting-associated protein 4B;Fidgetin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.8399 2 578.839874 1155.66519 81056.34 0.57795 0.00033454 0.59151 0.00034239 1.1695 0.00067693 579.341853422237 582.846968933104 103.96 0.73051 103.96 103.65 104.38 0 309 62 7 0 0 0 0.00090687 3 65866 64.04 53.626 1 1.5703 1.6281 0 18771000 7210300 11560000 13238 213 5039 5165 20653;20654;20655 20654 GILLFGTK 8 1 0 Unmodified _GILLFGTK_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;J3QKU9;K7EQP4;B4DYY0 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 424.7656 2 424.765646 847.516739 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.266 1 91.266 90.766 91.766 0 0 0 0 0.026541 1 56488 64.567 38.458 1 13239 965 5040 5166 20656 20656 GILLFGTK 8 1 0 Unmodified _GILLFGTK_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;J3QKU9;K7EQP4;B4DYY0 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 424.7658 2 424.765646 847.516739 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.311 1 91.311 90.811 91.811 0 0 0 0 0.050146 1 56516 54.611 28.503 1 13240 965 5040 5166 20657 20657 GILLQLFGGTR 11 0 1 Unmodified _GILLQLFGGTR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RG31 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.8519 2 587.850773 1173.68699 81719.45 0.86136 0.00050635 -0.21807 -0.00012819 0.6433 0.00037816 587.850570195732 592.854830705103 119.64 0.57656 119.64 119.31 119.88 0 153 38 6 0 0 0 0.00011853 2 77024 96.331 81.549 1 1.2524 1.2754 0 7052900 2736700 4316200 13241 235 5041 5167 20658;20659 20659 GILLQLFGGTR 11 0 1 Unmodified _GILLQLFGGTR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RG31 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.851 2 587.850773 1173.68699 80683.08 0.67329 0.0003958 -0.059524 -3.4991E-05 0.61377 0.0003608 587.850758269703 592.854926222938 118.96 0.47903 118.96 118.74 119.22 0 134 31 6 0 0 0 0.00026127 2 78315 90.15 77.191 1 1.1782 1.191 0 9802100 4532300 5269800 13242 235 5041 5167 20660;20661 20661 GILLQLFGGTR 11 0 1 Unmodified _GILLQLFGGTR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RG31 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.8568 2 587.850773 1173.68699 82848.16 0.75942 0.00044642 -0.12885 -7.5743E-05 0.63057 0.00037068 588.352173360414 592.854826142525 131.82 0.38501 131.82 131.65 132.04 -1.5259E-05 52 17 4 0 0 0 0.02141 1 80063 43.282 34.75 1 0.62922 0.55875 0 932570 553600 378980 13243 235 5041 5167 20662 20662 GILLQLFGGTR 11 0 1 Unmodified _GILLQLFGGTR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RG31 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.8559 2 587.850773 1173.68699 80405.08 0.92338 0.00054281 1.0714 0.0006298 1.9947 0.0011726 587.851353052335 592.855559227728 131.61 0.3598 131.61 131.36 131.72 0 33 12 4 0 0 0 0.02814 1 78962 39.848 31.316 1 0.74532 0.64724 0 1236000 696540 539460 13244 235 5041 5167 20663 20663 GILNFLMHPK 10 1 0 Oxidation (M) _GILNFLM(ox)HPK_ GILNFLM(1)HPK GILNFLM(60.44)HPK 0 1 0 B4DNW3 B4DNW3 B4DNW3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.3278 2 593.326076 1184.6376 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.991 1 85.991 85.491 86.491 7.6294E-06 0 0 0 0.0035669 1 51725 60.436 28.481 1 13245 1018 5042 5168 20664 20664 804 GILRPLSTR 9 0 2 Unmodified _GILRPLSTR_ 0 0 1 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 338.2133 3 338.213581 1011.61891 101936 0.059521 2.0131E-05 -0.0054621 -1.8473E-06 0.054059 1.8284E-05 338.213520569712 344.88569455031 42.223 0.55418 42.223 42.052 42.606 0 174 42 6 0 0 0 0.0073101 2 22329 54.416 24.943 1 1.1732 1.2773 0 73839000 33598000 40241000 13246 2139 5043 5169 20665;20666 20665 GILRPLSTR 9 0 2 Unmodified _GILRPLSTR_ 0 0 1 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 338.2137 3 338.213581 1011.61891 NaN NaN NaN 0.18181 6.1491E-05 NaN NaN NaN NaN 40.553 0.19572 40.553 40.409 40.605 -3.8147E-06 0 0 0 0.024839 1 21678 55.064 34.194 1 NaN NaN 0 12395000 12395000 0 13247 2139 5043 5169 20667 20667 GINSSNVENQLQATQAAR 18 0 1 Unmodified _GINSSNVENQLQATQAAR_ 0 0 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 950.9774 2 950.977209 1899.93987 62701.59 0.60546 0.00057578 -0.56273 -0.00053514 0.042736 4.0641E-05 951.47826083096 955.98099751722 60.994 0.70456 60.994 60.699 61.404 0 275 51 7 0 0 0 2.9028E-16 4 34722 113.54 113.54 1 1.0014 1.0244 0 35618000 17468000 18150000 13248 769 5044 5170 20668;20669;20670;20671 20669 GINSSNVENQLQATQAAR 18 0 1 Unmodified _GINSSNVENQLQATQAAR_ 0 0 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.485 2 950.977209 1899.93987 61662.54 0.45572 0.00043338 -0.080404 -7.6463E-05 0.37531 0.00035692 950.977476231532 955.981338427275 60.054 0.63451 60.054 59.774 60.409 0 263 42 9 0 0 0 1.7128E-16 2 34848 118.37 109.41 1 1.0975 1.268 0 69786000 32230000 37556000 13249 769 5044 5170 20672;20673 20672 GINSSNVENQLQATQAAR 18 0 1 Unmodified _GINSSNVENQLQATQAAR_ 0 0 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 950.9772 2 950.977209 1899.93987 62605.36 0.22378 0.00021281 0.14951 0.00014218 0.37329 0.00035499 950.977351885319 955.981619990351 71.457 0.91475 71.457 71.024 71.939 0 398 55 11 0 0 0 2.4443E-05 3 37591 69.92 61.816 1 0.62817 0.52995 0 28919000 17225000 11694000 13250 769 5044 5170 20674;20675;20676 20675 GINSSNVENQLQATQAAR 18 0 1 Unmodified _GINSSNVENQLQATQAAR_ 0 0 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 951.9768 2 950.977209 1899.93987 61962.68 0.049802 4.736E-05 -0.079649 -7.5745E-05 -0.029848 -2.8384E-05 951.478435672744 955.981564697749 72.117 0.83359 72.117 71.653 72.486 0 364 54 9 0 0 0 0.00030162 3 37150 46.797 46.797 1 0.63995 0.55504 0 23880000 14595000 9284800 13251 769 5044 5170 20677;20678;20679 20678 GINTLVTYDMVPEPK 15 1 0 Oxidation (M) _GINTLVTYDM(ox)VPEPK_ GINTLVTYDM(1)VPEPK GINTLVTYDM(90.61)VPEPK 0 1 0 H3BNX8;P20674 H3BNX8 H3BNX8 COX5A Cytochrome c oxidase subunit 5A, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 851.4379 2 846.929288 1691.84402 66568.11 0.76158 0.00064501 -0.23807 -0.00020163 0.52351 0.00044338 846.929088781229 850.936171556156 92.405 0.8405 92.405 92.04 92.88 0 334 81 6 0 0 0 6.3773E-06 3 55801 90.614 90.614 1 1.2249 1.2081 0 24864000 8491600 16372000 13252 1301 5045 5171 20680;20681;20682 20680 989 GINTLVTYDMVPEPK 15 1 0 Oxidation (M) _GINTLVTYDM(ox)VPEPK_ GINTLVTYDM(1)VPEPK GINTLVTYDM(85.84)VPEPK 0 1 0 H3BNX8;P20674 H3BNX8 H3BNX8 COX5A Cytochrome c oxidase subunit 5A, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.9319 2 846.929288 1691.84402 66726.74 1.0097 0.00085516 -0.31987 -0.00027091 0.68984 0.00058425 847.430743639091 850.935938342567 91.701 0.7258 91.701 91.415 92.141 0 246 62 6 0 0 0 2.1174E-05 2 56639 85.845 79.742 1 1.2948 1.3996 0 38489000 13357000 25132000 13253 1301 5045 5171 20683;20684 20684 989 GIPEFWLTVFK 11 1 0 Unmodified _GIPEFWLTVFK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.7023 2 668.868631 1335.72271 74994.92 0.62683 0.00041927 0.28908 0.00019336 0.91591 0.00061262 668.868664950865 672.875719098091 133.52 0.2149 133.52 133.43 133.64 0 13 4 5 0 0 0 0.00033835 1 87489 98.249 75.608 1 0.90425 1.0239 0 153520000 78903000 74614000 13254 332 5046 5172 20685 20685 GIPEFWLTVFK 11 1 0 Unmodified _GIPEFWLTVFK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3774 2 668.868631 1335.72271 73929.05 0.52611 0.0003519 0.79083 0.00052896 1.3169 0.00088086 668.868960215641 672.876272547548 133.46 0.27237 133.46 133.3 133.57 -1.5259E-05 29 6 8 0 0 0 0.00013524 2 89683 95.608 95.608 1 0.9983 1.1268 0 127860000 63010000 64846000 13255 332 5046 5172 20686;20687 20686 GIPEFWLTVFK 11 1 0 Unmodified _GIPEFWLTVFK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.4388 2 668.868631 1335.72271 74379.73 0.74617 0.00049909 0.11183 7.48E-05 0.858 0.00057389 668.868427693871 672.875875670157 134.9 0.14133 134.9 134.8 134.94 1.5259E-05 14 2 7 0 0 0 0.024147 1 82585 73.985 56.549 1 1.422 1.1654 0 36173000 15443000 20731000 13256 332 5046 5172 20688 20688 GIPEFWLTVFK 11 1 0 Unmodified _GIPEFWLTVFK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.432 2 668.868631 1335.72271 74894.58 0.92325 0.00061753 0.57411 0.00038401 1.4974 0.0010015 668.868759417014 672.876136814337 134.86 0.13826 134.86 134.76 134.9 0 14 2 7 0 0 0 0.02304 1 81666 77.677 60.241 1 1.3321 1.1152 0 45597000 19283000 26314000 13257 332 5046 5172 20689 20689 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 409.2283 3 405.891278 1214.652 93506.86 0.18049 7.326E-05 0.5162 0.00020952 0.6967 0.00028278 405.891308086772 409.227555498317 31.547 0.86002 31.547 31.284 32.144 0 383 81 7 0 0 0 0.0050006 1 15467 45.915 40.452 1 1.0819 1.2065 0 84254000 32728000 51526000 13258 824 5047 5173 20690 20690 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 405.8907 3 405.891278 1214.652 93920.05 -0.27596 -0.00011201 0.49384 0.00020045 0.21788 8.8434E-05 405.891252078772 409.227224968142 27.643 0.43799 27.643 27.38 27.818 0 125 22 9 0 0 0 0.00012594 1 12918 65.842 57.097 1 1.1864 1.3551 0 149410000 67892000 81516000 13259 824 5047 5173 20691 20691 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 409.2272 3 405.891278 1214.652 92494.88 -0.025314 -1.0275E-05 0.0065551 2.6607E-06 -0.018758 -7.6139E-06 405.891184160441 409.227346757444 27.941 0.48318 27.941 27.72 28.203 -1.9073E-06 147 23 9 0 0 0 0.00094401 1 13264 60.49 60.49 1 1.0308 1.1822 0 180180000 89240000 90944000 13260 824 5047 5173 20692 20692 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.3333 2 608.333279 1214.652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.686 1 27.686 27.186 28.186 0 0 0 0 0.01879 1 12955 54.066 39.859 1 13261 824 5047 5173 20693 20693 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 405.8909 3 405.891278 1214.652 94532.04 -0.24018 -9.7486E-05 -0.1389 -5.6378E-05 -0.37908 -0.00015386 405.891290759335 409.22730361121 32.498 0.84694 32.498 32.145 32.992 0 190 41 8 0 0 0 0.00093909 2 13948 54.7 54.7 1 0.9605 0.82839 0 75215000 38830000 36385000 13262 824 5047 5173 20694;20695 20694 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.3335 2 608.333279 1214.652 78462.55 0.20864 0.00012692 0.38324 0.00023313 0.59187 0.00036006 608.333363123673 613.337460331115 32.484 0.39163 32.484 32.269 32.661 0 80 15 8 0 0 0 0.0020164 2 14019 63.076 63.076 1 0.99108 0.84651 0 8812000 4343700 4468300 13263 824 5047 5173 20696;20697 20697 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 405.8911 3 405.891278 1214.652 93352.55 -0.14784 -6.0006E-05 -0.15992 -6.4909E-05 -0.30776 -0.00012492 405.891216960082 409.227311822404 32.247 0.8582 32.247 32.044 32.902 0 249 41 10 0 0 0 0.00061224 2 13313 54.7 50.391 1 0.962 0.83948 0 67861000 34331000 33530000 13264 824 5047 5173 20698;20699 20698 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.334 2 608.333279 1214.652 77240.66 0.46745 0.00028437 -0.05482 -3.3349E-05 0.41263 0.00025102 608.333369290378 613.337150608738 32.234 0.46194 32.234 32.044 32.506 0 110 23 7 0 0 0 0.00046386 2 13332 76.465 76.465 1 1.1491 0.94582 0 8477800 3803700 4674100 13265 824 5047 5173 20700;20701 20700 GIPILSLDWLHQSR 14 0 1 Unmodified _GIPILSLDWLHQSR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.6393 3 545.638618 1633.89403 NaN NaN NaN 0.3121 0.00017029 NaN NaN NaN NaN 121.01 0.34174 121.01 120.74 121.09 7.6294E-06 0 0 0 0.029398 1 79901 23.481 8.6896 1 NaN NaN 0 2931600 2931600 0 13266 1738 5048 5174 20702 20702 GIPLESTDGER 11 0 1 Unmodified _GIPLESTDGER_ 0 0 0 Q6FI30;B7Z4T6;P08651;Q13051;A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;U3KPY9;A0A087WXP2;Q5W0Y9;A0A0S2Z4H3;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4;S4R308;K7ESG9;K7EKH0;K7EJB0;Q7Z3K7;C9JWJ8;K7EN08;D2DXM9;B4DHW2;Q14938 Q6FI30;A0A1B0GW37;B1AKN6 Q6FI30 NFIC;NFI;NFIB;NFIA;NFIX;DKFZp686I05275 Nuclear factor 1;Nuclear factor 1 C-type;Nuclear factor 1 B-type;Nuclear factor 1 A-type;Nuclear factor 1 X-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.2963 2 587.290942 1172.56733 78542.55 0.74105 0.00043521 0.067916 3.9887E-05 0.80896 0.0004751 587.291131602718 592.295035107497 44.788 0.79428 44.788 44.413 45.208 0 352 71 7 0 0 0 0.00036511 3 23926 84.213 72.991 1 0.83579 0.92667 0 66140000 34160000 31981000 13267 1091;816;473 5049 5175 20703;20704;20705 20704 GIPLESTDGER 11 0 1 Unmodified _GIPLESTDGER_ 0 0 0 Q6FI30;B7Z4T6;P08651;Q13051;A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;U3KPY9;A0A087WXP2;Q5W0Y9;A0A0S2Z4H3;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4;S4R308;K7ESG9;K7EKH0;K7EJB0;Q7Z3K7;C9JWJ8;K7EN08;D2DXM9;B4DHW2;Q14938 Q6FI30;A0A1B0GW37;B1AKN6 Q6FI30 NFIC;NFI;NFIB;NFIA;NFIX;DKFZp686I05275 Nuclear factor 1;Nuclear factor 1 C-type;Nuclear factor 1 B-type;Nuclear factor 1 A-type;Nuclear factor 1 X-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.2976 2 587.290942 1172.56733 78895.92 0.9391 0.00055153 -0.26107 -0.00015332 0.67803 0.0003982 587.290673565884 592.294859799651 44.064 0.58704 44.064 43.75 44.337 0 302 51 9 0 0 0 0.00076687 2 23998 72.643 66.54 1 0.81951 0.93202 0 118630000 65540000 53091000 13268 1091;816;473 5049 5175 20706;20707 20707 GIPLESTDGER 11 0 1 Unmodified _GIPLESTDGER_ 0 0 0 Q6FI30;B7Z4T6;P08651;Q13051;A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;U3KPY9;A0A087WXP2;Q5W0Y9;A0A0S2Z4H3;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4;S4R308;K7ESG9;K7EKH0;K7EJB0;Q7Z3K7;C9JWJ8;K7EN08;D2DXM9;B4DHW2;Q14938 Q6FI30;A0A1B0GW37;B1AKN6 Q6FI30 NFIC;NFI;NFIB;NFIA;NFIX;DKFZp686I05275 Nuclear factor 1;Nuclear factor 1 C-type;Nuclear factor 1 B-type;Nuclear factor 1 A-type;Nuclear factor 1 X-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.295 2 587.290942 1172.56733 79730.95 0.27065 0.00015895 0.19762 0.00011606 0.46827 0.00027501 587.291212485766 592.295082619947 51.471 0.69038 51.471 51.074 51.764 3.8147E-06 284 49 8 0 0 0 0.0030512 2 25363 60.518 51.304 1 0.79332 0.64938 0 13242000 7685300 5556900 13269 1091;816;473 5049 5175 20708;20709 20708 GIPLESTDGER 11 0 1 Unmodified _GIPLESTDGER_ 0 0 0 Q6FI30;B7Z4T6;P08651;Q13051;A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;U3KPY9;A0A087WXP2;Q5W0Y9;A0A0S2Z4H3;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4;S4R308;K7ESG9;K7EKH0;K7EJB0;Q7Z3K7;C9JWJ8;K7EN08;D2DXM9;B4DHW2;Q14938 Q6FI30;A0A1B0GW37;B1AKN6 Q6FI30 NFIC;NFI;NFIB;NFIA;NFIX;DKFZp686I05275 Nuclear factor 1;Nuclear factor 1 C-type;Nuclear factor 1 B-type;Nuclear factor 1 A-type;Nuclear factor 1 X-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.2944 2 587.290942 1172.56733 78660.66 0.29893 0.00017556 0.0976 5.7319E-05 0.39653 0.00023288 587.291134927259 592.295027965953 51.79 0.78626 51.79 51.352 52.139 0 293 54 7 0 0 0 0.02141 1 25084 43.282 34.068 1 0.79423 0.64075 0 10973000 5410100 5563200 13270 1091;816;473 5049 5175 20710 20710 GIPVELWAHYVEELNSTQR 19 0 1 Unmodified _GIPVELWAHYVEELNSTQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.715 3 747.714804 2240.12258 NaN NaN NaN -0.007748 -5.7933E-06 NaN NaN NaN NaN 124.47 1.2089 124.47 123.9 125.11 0 0 0 0 3.5639E-07 2 80723 78.021 64.149 1 NaN NaN 0 10524000 10524000 0 13271 897 5050 5176 20711;20712 20711 GIPVELWAHYVEELNSTQR 19 0 1 Unmodified _GIPVELWAHYVEELNSTQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.3843 3 747.714804 2240.12258 72105.64 1.0088 0.00075428 0.11674 8.7286E-05 1.1255 0.00084157 748.048998301438 751.050973024784 122.75 0.62172 122.75 122.58 123.2 0 164 47 7 0 0 0 8.3996E-05 3 81434 44.735 44.735 1 0.76368 0.77228 0 9670600 3953700 5716900 13272 897 5050 5176 20713;20714;20715 20713 GIPVELWAHYVEELNSTQR 19 0 1 Unmodified _GIPVELWAHYVEELNSTQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.3864 3 747.714804 2240.12258 69906.03 0.79492 0.00059437 0.21538 0.00016104 1.0103 0.00075541 748.049242351417 751.385377042709 123.76 1.1415 123.76 123.16 124.3 0 519 81 9 0 0 0 4.613E-06 2 82035 67.449 67.449 1 0.80224 0.86345 0 25768000 15112000 10657000 13273 897 5050 5176 20716;20717 20716 GIPVELWAHYVEELNSTQR 19 0 1 Unmodified _GIPVELWAHYVEELNSTQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.387 3 747.714804 2240.12258 69641.74 1.3184 0.00098582 0.66063 0.00049396 1.9791 0.0014798 748.049110979307 751.385798887076 134.39 0.27414 134.39 134.23 134.5 -1.5259E-05 84 12 14 0 0 0 1.2496E-05 2 82049 50.358 44.652 1 1.1452 0.98099 0 40802000 19807000 20994000 13274 897 5050 5176 20718;20719 20718 GIPVELWAHYVEELNSTQR 19 0 1 Unmodified _GIPVELWAHYVEELNSTQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.0497 3 747.714804 2240.12258 69896.36 0.83161 0.0006218 0.48562 0.0003631 1.3172 0.00098491 748.048947088951 751.050925840512 134.33 0.2424 134.33 134.17 134.41 0 68 11 12 0 0 0 3.9427E-05 2 81089 47.752 39.855 1 1.0874 0.94851 0 35655000 17174000 18482000 13275 897 5050 5176 20720;20721 20721 GIPVLVGLLDHPK 13 1 0 Unmodified _GIPVLVGLLDHPK_ 0 0 0 Q7KZJ3;A0A024R4Z0;Q96FS1;Q68DU0;C9JZR2;O60716;A0A024R4Y7;E9PKY0 Q7KZJ3 Q7KZJ3 CTNND1;DKFZp781O2021 Catenin delta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.4214 2 679.413737 1356.81292 77706.08 1.1481 0.00078 0.11274 7.6598E-05 1.2608 0.0008566 679.915168885142 683.420704465666 111.56 0.50212 111.56 111.3 111.81 0 82 36 4 0 0 0 0.03805 1 70299 31.843 31.843 1 1.038 1.0257 0 8397700 3976300 4421400 13276 165 5051 5177 20722 20722 GIPVVEHK 8 1 0 Unmodified _GIPVVEHK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 439.7575 2 439.758352 877.502152 89387.8 0.10349 4.5509E-05 -0.272 -0.00011961 -0.16851 -7.4106E-05 439.758494898658 443.765160633762 26.856 1.1215 26.856 26.489 27.61 0 352 65 10 0 0 0 0.0042374 2 12073 94.262 78.823 1 0.67021 0.81139 0 1863200000 1090200000 773070000 13277 1471;1679 5052 5178 20723;20724 20724 GIPVVEHK 8 1 0 Unmodified _GIPVVEHK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 439.7587 2 439.758352 877.502152 90718.51 -0.071998 -3.1662E-05 -0.47212 -0.00020762 -0.54411 -0.00023928 439.758294719031 443.765121685187 26.309 1.3523 26.309 25.916 27.269 0 310 69 10 0 0 0 0.0068997 2 11646 85.265 74.196 1 0.65283 0.77234 0 1919900000 1135800000 784190000 13278 1471;1679 5052 5178 20725;20726 20726 GIPVVEHK 8 1 0 Unmodified _GIPVVEHK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 443.7652 2 439.758352 877.502152 89503.12 -0.21575 -9.488E-05 -0.015968 -7.0222E-06 -0.23172 -0.0001019 439.758743207458 443.765270974848 29.417 1.7643 29.417 29.098 30.862 1.9073E-06 628 122 10 0 0 0 0.0086435 2 11840 77.741 64.752 1 1.3297 1.1596 0 162780000 68491000 94286000 13279 1471;1679 5052 5178 20727;20728 20727 GIPVVEHK 8 1 0 Unmodified _GIPVVEHK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 439.7581 2 439.758352 877.502152 88928.57 -0.29017 -0.0001276 -0.16101 -7.0807E-05 -0.45118 -0.00019841 439.758663378456 443.765205079399 29.397 1.4934 29.397 29.032 30.526 0 520 94 10 0 0 0 0.013281 2 11376 65.676 58.526 1 1.2883 1.1112 0 195820000 82758000 113070000 13280 1471;1679 5052 5178 20729;20730 20730 GISAGAVQTAGK 12 1 0 Unmodified _GISAGAVQTAGK_ 0 0 0 P46087;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2933 2 530.293288 1058.57202 81400.84 0.42111 0.00022331 -0.10125 -5.3693E-05 0.31986 0.00016962 530.293139334831 534.300272804508 27.76 0.43661 27.76 27.553 27.99 0 156 28 9 0 0 0 3.2542E-08 2 12850 118.04 118.04 1 1.2084 1.3601 0 120350000 58384000 61962000 13281 1570 5053 5179 20731;20732 20732 GISAGAVQTAGK 12 1 0 Unmodified _GISAGAVQTAGK_ 0 0 0 P46087;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.3004 2 530.293288 1058.57202 82155.8 0.22905 0.00012146 0.10402 5.5159E-05 0.33307 0.00017662 530.293301125232 534.300338917341 27.328 0.62304 27.328 26.968 27.591 1.9073E-06 127 31 8 0 0 0 5.7951E-05 2 12563 98.254 98.254 1 1.0916 1.22 0 97791000 45702000 52089000 13282 1570 5053 5179 20733;20734 20733 GISCMNTTLSESPFK 15 1 0 Oxidation (M) _GISCM(ox)NTTLSESPFK_ GISCM(1)NTTLSESPFK GISCM(46.59)NTTLSESPFK 0 1 0 V9HWB5;Q15181 V9HWB5 V9HWB5 HEL-S-66p;PPA1 Inorganic pyrophosphatase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.3936 2 844.38693 1686.75931 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.405 1 72.405 71.905 72.905 -7.6294E-06 0 0 0 0.0051619 1 43460 46.592 36.36 1 13283 1755 5054 5180 20735 20735 1621 GISDPLTVFEQTEAAAR 17 0 1 Unmodified _GISDPLTVFEQTEAAAR_ 0 0 0 A0A1B0GWA2;B7Z3Q4;O00116;Q53S12;B8ZZ81 A0A1B0GWA2 A0A1B0GWA2 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.9604 2 902.957423 1803.90029 NaN NaN NaN 0.38741 0.00034981 NaN NaN NaN NaN 118.67 0.36217 118.67 118.55 118.91 0 0 0 0 0.0018751 1 76195 55.261 49.655 1 NaN NaN 0 3951900 0 3951900 13284 635 5055 5181 20736 20736 GISHVIVDEIHER 13 0 1 Unmodified _GISHVIVDEIHER_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.2713 3 501.935323 1502.78414 85912.59 0.48103 0.00024144 -0.15479 -7.7697E-05 0.32623 0.00016375 501.935231177864 505.271303870541 65.825 0.73094 65.825 65.599 66.33 0 331 49 10 0 0 0 3.7755E-05 2 34008 70.26 70.26 1 1.5242 1.2469 0 13508000 5573200 7934900 13285 1691 5056 5182 20737;20738 20738 GISHVIVDEIHER 13 0 1 Unmodified _GISHVIVDEIHER_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.9353 3 501.935323 1502.78414 85198.53 0.062882 3.1563E-05 -0.14013 -7.0334E-05 -0.077245 -3.8772E-05 501.935256287958 505.270997199105 65.515 0.78244 65.515 65.186 65.968 0 304 58 8 0 0 0 4.1722E-05 2 33084 77.192 77.192 1 1.643 1.3279 0 11513000 4727600 6785300 13286 1691 5056 5182 20739;20740 20740 GISLNPEQWSQLK 13 1 0 Unmodified _GISLNPEQWSQLK_ 0 0 0 Q6IBA2;Q59G24;P53999;B7Z1Z0 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.3965 2 750.396273 1498.77799 69109.96 0.79919 0.00059971 -0.21695 -0.0001628 0.58224 0.00043691 750.395797296918 754.403156619571 107.28 0.64732 107.28 106.93 107.58 0 314 49 9 0 0 0 8.9502E-06 2 66612 101.39 101.39 1 0.63365 0.70324 0 59398000 35101000 24297000 13287 1608 5057 5183 20741;20742 20742 GISLNPEQWSQLK 13 1 0 Unmodified _GISLNPEQWSQLK_ 0 0 0 Q6IBA2;Q59G24;P53999;B7Z1Z0 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.4014 2 750.396273 1498.77799 70150.91 0.79993 0.00060026 0.088108 6.6116E-05 0.88804 0.00066638 750.395736168846 754.403138191701 106.66 0.88131 106.66 106.28 107.16 0 395 64 10 0 0 0 0.00013532 2 67774 82.954 82.954 1 0.6332 0.70749 0 91332000 56227000 35105000 13288 1608 5057 5183 20743;20744 20744 GISLNPEQWSQLK 13 1 0 Unmodified _GISLNPEQWSQLK_ 0 0 0 Q6IBA2;Q59G24;P53999;B7Z1Z0 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 754.4039 2 750.396273 1498.77799 70145.48 0.89514 0.00067171 -0.3948 -0.00029626 0.50034 0.00037545 750.395922557277 754.403470813433 118.76 0.9229 118.76 118.28 119.21 0 272 43 11 0 0 0 1.3272E-20 2 70155 150.46 150.46 1 0.32097 0.26462 0 41442000 31113000 10329000 13289 1608 5057 5183 20745;20746 20746 GISLNPEQWSQLK 13 1 0 Unmodified _GISLNPEQWSQLK_ 0 0 0 Q6IBA2;Q59G24;P53999;B7Z1Z0 Q6IBA2 Q6IBA2 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 750.3964 2 750.396273 1498.77799 69579.13 0.73546 0.00055189 -0.29459 -0.00022106 0.44087 0.00033083 750.395789056847 754.403490750496 118.57 1.0524 118.57 118.11 119.17 0 199 48 9 0 0 0 3.0063E-06 2 69055 108.9 108.9 1 0.29334 0.24439 0 40440000 31707000 8733300 13290 1608 5057 5183 20747;20748 20747 GISQAEIR 8 0 1 Unmodified _GISQAEIR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.243 2 437.243067 872.47158 NaN NaN NaN -0.21571 -9.4318E-05 NaN NaN NaN NaN 27.951 0.35393 27.951 27.795 28.149 1.9073E-06 0 0 0 0.0077322 1 13189 81.784 24.32 1 NaN NaN 0 15982000 15982000 0 13291 1699 5058 5184 20749 20749 GISVHISNAEPK 12 1 0 Unmodified _GISVHISNAEPK_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148;A0A087WXQ5;A0A087WV68;B1AKP7;G3V162;A0A087X260;A0A087WYY0;A0A087WW61;A0A087WX67;A0A087WXV3;A0A087WTZ4;K7EL26;A0A087WYE7;A0A087WZC9 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.346 2 626.338227 1250.6619 NaN NaN NaN -0.70896 -0.00044405 NaN NaN NaN NaN 41.517 0.45876 41.517 41.267 41.726 0 0 0 0 0.00062905 1 21808 86.898 50.205 1 NaN NaN 0 24475000 0 24475000 13292 153 5059 5185 20750 20750 GISVHISNAEPK 12 1 0 Unmodified _GISVHISNAEPK_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148;A0A087WXQ5;A0A087WV68;B1AKP7;G3V162;A0A087X260;A0A087WYY0;A0A087WW61;A0A087WX67;A0A087WXV3;A0A087WTZ4;K7EL26;A0A087WYE7;A0A087WZC9 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8409 2 626.338227 1250.6619 78283.08 0.76609 0.00047983 -0.38381 -0.0002404 0.38228 0.00023944 626.337921289697 630.345051931368 40.336 0.62741 40.336 40.004 40.632 0 152 53 5 0 0 0 0.00055349 2 21419 69.275 50.964 1 1.4175 1.5093 0 36411000 16217000 20194000 13293 153 5059 5185 20751;20752 20751 GISVHISNAEPK 12 1 0 Unmodified _GISVHISNAEPK_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148;A0A087WXQ5;A0A087WV68;B1AKP7;G3V162;A0A087X260;A0A087WYY0;A0A087WW61;A0A087WX67;A0A087WXV3;A0A087WTZ4;K7EL26;A0A087WYE7;A0A087WZC9 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.3376 2 626.338227 1250.6619 78340.57 0.26993 0.00016907 0.10567 6.6184E-05 0.3756 0.00023525 626.338198844105 630.34530898845 48.309 0.3992 48.309 48.097 48.496 0 126 33 5 0 0 0 0.042495 1 22901 33.87 17.732 1 1.0432 0.84578 0 2776800 1271400 1505400 13294 153 5059 5185 20753 20753 GITGVDLFGTTDAVVK 16 1 0 Unmodified _GITGVDLFGTTDAVVK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.9305 2 796.930145 1591.84574 NaN NaN NaN 1.1774 0.00093827 NaN NaN NaN NaN 112.69 0.6109 112.69 112.49 113.1 0 0 0 0 3.0357E-06 1 71126 107.09 92.404 1 NaN NaN 0 12415000 12415000 0 13295 1607 5060 5186 20754 20754 GITGVDLFGTTDAVVK 16 1 0 Unmodified _GITGVDLFGTTDAVVK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 796.931 2 796.930145 1591.84574 67622.22 0.84837 0.00067609 0.69744 0.00055581 1.5458 0.0012319 797.431332162068 801.439959988026 123.81 0.48216 123.81 123.56 124.04 0 106 20 7 0 0 0 0.00015108 2 74115 84.892 84.892 1 0.73276 0.57862 0 5285800 3143600 2142200 13296 1607 5060 5186 20755;20756 20755 GITGVDLFGTTDAVVK 16 1 0 Unmodified _GITGVDLFGTTDAVVK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 796.9309 2 796.930145 1591.84574 67604.49 0.80975 0.00064532 1.0066 0.00080221 1.8164 0.0014475 796.930131596699 800.938836250478 123.72 0.52959 123.72 123.41 123.93 0 89 20 7 0 0 0 6.5317E-05 1 73076 107.17 107.17 1 0.63799 0.52098 0 5645600 2984100 2661500 13297 1607 5060 5186 20757 20757 GITINAAHVEYSTAAR 16 0 1 Unmodified _GITINAAHVEYSTAAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.2953 3 558.625037 1672.85328 80979.12 0.37793 0.00021112 0.46552 0.00026005 0.84345 0.00047117 558.625504835383 561.961040028487 62.238 0.93567 62.238 61.794 62.729 3.8147E-06 358 82 8 0 0 0 4.0644E-05 3 35697 76.82 76.82 1 2.0079 2.0541 0 32767000 13308000 19459000 13298 1580 5061 5187 20758;20759;20760 20759 GITINAAHVEYSTAAR 16 0 1 Unmodified _GITINAAHVEYSTAAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.6259 3 558.625037 1672.85328 81283.1 0.25922 0.00014481 0.2272 0.00012692 0.48642 0.00027173 558.625336035321 561.96103377378 60.829 0.72968 60.829 60.409 61.138 3.8147E-06 284 62 6 0 0 0 5.5708E-05 1 35526 60.768 60.768 1 1.6702 1.8529 0 42772000 15610000 27162000 13299 1580 5061 5187 20761 20761 GITINAAHVEYSTAAR 16 0 1 Unmodified _GITINAAHVEYSTAAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.438 2 837.433918 1672.85328 68050.29 0.34069 0.0002853 0.63574 0.00053239 0.97642 0.00081769 837.435635797376 842.438697077304 60.788 0.58044 60.788 60.483 61.063 3.8147E-06 194 50 6 0 0 0 5.0957E-07 2 35557 109.84 109.84 1 1.8445 1.9603 0 24152000 6162900 17989000 13300 1580 5061 5187 20762;20763 20763 GITINAAHVEYSTAAR 16 0 1 Unmodified _GITINAAHVEYSTAAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.4343 2 837.433918 1672.85328 66649.7 0.39255 0.00032874 0.82649 0.00069213 1.219 0.0010209 837.435484667031 842.438261264534 72.134 0.43654 72.134 71.907 72.343 0 121 34 7 0 0 0 0.015131 2 38027 37.248 37.248 1 1.4803 1.2651 0 5809300 2241000 3568400 13301 1580 5061 5187 20764;20765 20765 GITINAAHVEYSTAAR 16 0 1 Unmodified _GITINAAHVEYSTAAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.2961 3 558.625037 1672.85328 81491.05 0.3979 0.00022228 0.20413 0.00011403 0.60203 0.00033631 558.95957324163 561.960928749919 72.117 0.45113 72.117 71.907 72.358 -7.6294E-06 148 35 6 0 0 0 0.00062061 3 38036 42.708 42.708 1 1.2698 1.0909 0 6409300 3128600 3280700 13302 1580 5061 5187 20766;20767;20768 20767 GITINAAHVEYSTAAR 16 0 1 Unmodified _GITINAAHVEYSTAAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.2959 3 558.625037 1672.85328 81289.52 0.35046 0.00019577 0.029025 1.6214E-05 0.37948 0.00021199 558.625410058249 561.96083488967 72.508 0.41891 72.508 72.311 72.73 0 185 37 7 0 0 0 0.0021221 1 37444 35.176 35.176 1 1.174 0.97817 0 6906300 3146900 3759400 13303 1580 5061 5187 20769 20769 GITINAAHVEYSTAAR 16 0 1 Unmodified _GITINAAHVEYSTAAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 837.4367 2 837.433918 1672.85328 66701.45 0.35515 0.00029741 0.47238 0.00039559 0.82753 0.000693 837.434730149489 842.438118543838 72.521 0.37902 72.521 72.329 72.708 0 146 33 6 0 0 0 0.003149 2 37482 43.03 43.03 1 1.3326 1.1056 0 5408900 2513900 2895000 13304 1580 5061 5187 20770;20771 20771 GITNLCVIGGDGSLTGANLFR 21 0 1 Unmodified _GITNLCVIGGDGSLTGANLFR_ 0 0 0 Q01813;Q5VSR5;V9GYV7 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1073.5557 2 1068.04932 2134.08409 57461.13 0.56951 0.00060827 -0.62261 -0.00066498 -0.053102 -5.6716E-05 1068.55138989593 1073.55435521282 121.96 0.59245 121.96 121.75 122.34 0 198 39 9 0 0 0 1.521E-08 2 78820 107.74 95.45 1 1.6669 1.7353 0 21125000 8071200 13053000 13305 1677 5062 5188 20772;20773 20772 GITNLCVIGGDGSLTGANLFR 21 0 1 Unmodified _GITNLCVIGGDGSLTGANLFR_ 0 0 0 Q01813;Q5VSR5;V9GYV7 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1073.5552 2 1068.04932 2134.08409 58580.04 0.66622 0.00071156 -0.79618 -0.00085036 -0.12995 -0.0001388 1068.55064527401 1073.55428420566 121.48 0.39072 121.48 121.27 121.66 7.6294E-06 178 29 9 0 0 0 1.5713E-15 2 80412 137.46 118.62 1 1.6592 1.7815 0 25453000 8971600 16481000 13306 1677 5062 5188 20774;20775 20774 GITPLLER 8 0 1 Unmodified _GITPLLER_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.7758 2 449.77146 897.528367 90513.83 0.17282 7.773E-05 0.59761 0.00026879 0.77043 0.00034652 449.771703001144 454.775568110603 69.181 0.86974 69.181 68.726 69.595 0 260 75 5 0 0 0 0.029143 1 39989 52.786 24.363 1 1.215 1.2496 0 25133000 10615000 14518000 13307 1854 5063 5189 20776 20776 GITPLLER 8 0 1 Unmodified _GITPLLER_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.7752 2 449.77146 897.528367 92473.95 0.047938 2.1561E-05 0.1456 6.5485E-05 0.19353 8.7046E-05 449.771633000283 454.77555607406 67.81 0.88282 67.81 67.375 68.258 0 314 74 7 0 0 0 0.014196 2 40103 63.565 44.783 1 1.0455 1.1443 0 33340000 15937000 17403000 13308 1854 5063 5189 20777;20778 20777 GIVDQSQQAYQEAFEISK 18 1 0 Unmodified _GIVDQSQQAYQEAFEISK_ 0 0 0 D0PNI1;P63104;B0AZS6;B7Z2E6;H0YB80;Q2F831 D0PNI1 D0PNI1 YWHAZ 14-3-3 protein zeta/delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1025.5062 2 1020.99728 2039.98 61682.35 0.64114 0.0006546 0.16127 0.00016465 0.80241 0.00081925 1020.99683869217 1025.50610203209 101.84 0.54268 101.84 101.57 102.12 7.6294E-06 137 42 5 0 0 0 2.5335E-05 1 62606 69.345 69.345 1 1.9873 1.9765 0 9601400 3220800 6380600 13309 1182 5064 5190 20779 20779 GIVDQSQQAYQEAFEISK 18 1 0 Unmodified _GIVDQSQQAYQEAFEISK_ 0 0 0 D0PNI1;P63104;B0AZS6;B7Z2E6;H0YB80;Q2F831 D0PNI1 D0PNI1 YWHAZ 14-3-3 protein zeta/delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1025.0052 2 1020.99728 2039.98 NaN NaN NaN 0.14804 0.00015115 NaN NaN NaN NaN 101.28 0.56985 101.28 101.02 101.59 0 0 0 0 3.1244E-09 1 63735 85.536 72.768 1 NaN NaN 0 8909000 0 8909000 13310 1182 5064 5190 20780 20780 GIVDSITGQR 10 0 1 Unmodified _GIVDSITGQR_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.2864 2 523.285463 1044.55637 85936.2 0.3338 0.00017467 0.52121 0.00027274 0.85502 0.00044742 523.285862368558 528.289846472773 61.691 0.48617 61.691 61.452 61.939 0 99 38 4 0 0 0 0.0026988 2 35285 67.897 46.047 1 0.89469 0.92187 0 14087000 6225800 7861300 13311 1486 5065 5191 20781;20782 20781 GIVDSITGQR 10 0 1 Unmodified _GIVDSITGQR_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2859 2 523.285463 1044.55637 NaN NaN NaN 0.72094 0.00037726 NaN NaN NaN NaN 60.532 0.4396 60.532 60.389 60.829 3.8147E-06 0 0 0 0.016394 1 35375 56.729 39.344 1 NaN NaN 0 4627000 4627000 0 13312 1486 5065 5191 20783 20783 GIVDSITGQR 10 0 1 Unmodified _GIVDSITGQR_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.2858 2 523.285463 1044.55637 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.741 1 70.741 70.241 71.241 0 0 0 0 0.042499 1 37187 46.158 26.681 1 13313 1486 5065 5191 20784 20784 GIVEESVTGVHR 12 0 1 Unmodified _GIVEESVTGVHR_ 0 0 0 Q6ZMM9;Q2NKW8;H0Y8B3;Q6ZNS6;A0A024R0A8;V5YQL4;O43865;Q96HN2 Q6ZMM9 Q6ZMM9 AHCYL1;AHCYL2;FGFR2-AHCYL1 Adenosylhomocysteinase;Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.8467 2 641.841133 1281.66771 76615.88 0.97199 0.00062386 -0.34678 -0.00022258 0.62521 0.00040128 641.840802823129 646.844984233012 41.517 0.59277 41.517 41.225 41.818 0 144 50 4 0 0 0 0.00020601 2 21756 79.974 61.194 1 1.424 1.4785 0 22457000 8055500 14401000 13314 40 5066 5192 20785;20786 20785 GIVEESVTGVHR 12 0 1 Unmodified _GIVEESVTGVHR_ 0 0 0 Q6ZMM9;Q2NKW8;H0Y8B3;Q6ZNS6;A0A024R0A8;V5YQL4;O43865;Q96HN2 Q6ZMM9 Q6ZMM9 AHCYL1;AHCYL2;FGFR2-AHCYL1 Adenosylhomocysteinase;Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.8462 2 641.841133 1281.66771 75517.81 0.80993 0.00051985 -0.04138 -2.656E-05 0.76855 0.00049329 641.841167672737 646.845090569977 40.43 0.44246 40.43 40.176 40.618 0 123 37 6 0 0 0 5.7618E-25 2 21584 163.16 126.6 1 1.8014 1.9853 0 41242000 16003000 25239000 13315 40 5066 5192 20787;20788 20788 GIVEFSGK 8 1 0 Unmodified _GIVEFSGK_ 0 0 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367;C9IZL7 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.736 2 418.729261 835.443968 93453.8 0.36075 0.00015106 0.15543 6.5084E-05 0.51618 0.00021614 418.729171019656 422.736408956259 46.607 0.84305 46.607 46.268 47.112 -3.8147E-06 286 70 6 0 0 0 0.012693 2 25718 67.032 42.358 1 1.5166 1.6956 0 105630000 40771000 64857000 13316 573 5067 5193 20789;20790 20790 GIVILMVDEK 10 1 0 Oxidation (M) _GIVILM(ox)VDEK_ GIVILM(1)VDEK GIVILM(64.71)VDEK 0 1 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.8264 2 566.81775 1131.62095 81347.43 0.90972 0.00051564 0.56868 0.00032234 1.4784 0.00083798 566.817791583233 570.825198699292 85.83 0.25818 85.83 85.648 85.906 0 53 17 4 0 0 0 0.0016457 2 52833 64.711 64.711 1 1.6668 1.719 0 18248000 6070400 12178000 13317 1563 5068 5194 20791;20792 20792 1316 GIVNEQFLLQR 11 0 1 Unmodified _GIVNEQFLLQR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;J3QRJ8 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.8694 2 658.869694 1315.72483 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.352 1 94.352 93.852 94.852 0 0 0 0 7.8831E-09 1 57310 113.26 93.469 1 13318 965 5069 5195 20793 20793 GIVNEQFLLQR 11 0 1 Unmodified _GIVNEQFLLQR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;J3QRJ8 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.8699 2 658.869694 1315.72483 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.479 1 93.479 92.979 93.979 0 0 0 0 1.1347E-07 1 58023 107.57 83.353 1 13319 965 5069 5195 20794 20794 GIVNEQFLLQR 11 0 1 Unmodified _GIVNEQFLLQR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;J3QRJ8 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.8708 2 658.869694 1315.72483 75479.61 0.79853 0.00052613 0.12697 8.366E-05 0.9255 0.00060979 658.869515516623 663.873728556614 107.73 0.37877 107.73 107.55 107.93 7.6294E-06 78 19 6 0 0 0 0.00046897 1 61733 76.064 53.423 1 0.33889 0.28314 0 3230000 2365400 864610 13320 965 5069 5195 20795 20795 GIVNEQFLLQR 11 0 1 Unmodified _GIVNEQFLLQR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;J3QRJ8 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.869 2 658.869694 1315.72483 74084.29 0.63574 0.00041887 -0.027815 -1.8326E-05 0.60792 0.00040054 658.869246365448 663.873732220601 107.64 0.49094 107.64 107.36 107.85 0 109 30 6 0 0 0 0.0015603 1 60711 66.568 49.542 1 0.41106 0.35111 0 3242400 2407600 834800 13321 965 5069 5195 20796 20796 GIYAYGFEK 9 1 0 Unmodified _GIYAYGFEK_ 0 0 0 A0A024R8W0;P38919;I3L3H2;C9JUF0;Q59GT8;Q5JWW0;J3QQP0;E9PBH4;F8WE11;A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102;J3KS93;J3KSN7;J3KT04;E7EMV8;Q86WD0 A0A024R8W0;A8K7F6 A8K7F6 DDX48;EIF4A3;EIF4A2;DKFZp566L241;EIF4A1 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.2685 2 524.260925 1046.5073 83777.38 0.31725 0.00016632 0.74645 0.00039133 1.0637 0.00055766 524.261053162698 528.268127688222 67.389 1.4722 67.389 66.552 68.024 0 563 117 7 0 0 0 0.0017345 4 39029 81.548 70.479 1 1.9464 2.2111 0 163010000 51487000 111520000 13322 770;261 5070 5196 20797;20798;20799;20800 20799 GIYAYGFEK 9 1 0 Unmodified _GIYAYGFEK_ 0 0 0 A0A024R8W0;P38919;I3L3H2;C9JUF0;Q59GT8;Q5JWW0;J3QQP0;E9PBH4;F8WE11;A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102;J3KS93;J3KSN7;J3KT04;E7EMV8;Q86WD0 A0A024R8W0;A8K7F6 A8K7F6 DDX48;EIF4A3;EIF4A2;DKFZp566L241;EIF4A1 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.2681 2 524.260925 1046.5073 83424.13 0.2392 0.0001254 0.55871 0.00029291 0.79791 0.00041832 524.260997852935 528.268057848792 66.18 1.6504 66.18 65.241 66.891 0 599 138 6 0 0 0 0.00045646 2 39077 98.997 86.008 1 1.8935 2.1595 0 152430000 50669000 101760000 13323 770;261 5070 5196 20801;20802 20802 GIYAYGFEK 9 1 0 Unmodified _GIYAYGFEK_ 0 0 0 A0A024R8W0;P38919;I3L3H2;C9JUF0;Q59GT8;Q5JWW0;J3QQP0;E9PBH4;F8WE11;A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102;J3KS93;J3KSN7;J3KT04;E7EMV8;Q86WD0 A0A024R8W0;A8K7F6 A8K7F6 DDX48;EIF4A3;EIF4A2;DKFZp566L241;EIF4A1 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.2614 2 524.260925 1046.5073 82995.61 0.14023 7.3516E-05 0.49843 0.00026131 0.63865 0.00033482 524.260995825934 528.268372243325 77.133 1.1573 77.133 76.71 77.867 0 253 77 4 0 0 0 0.019545 1 41197 51.066 47.698 1 1.5585 1.2225 0 16835000 6223600 10611000 13324 770;261 5070 5196 20803 20803 GIYAYGFEK 9 1 0 Unmodified _GIYAYGFEK_ 0 0 0 A0A024R8W0;P38919;I3L3H2;C9JUF0;Q59GT8;Q5JWW0;J3QQP0;E9PBH4;F8WE11;A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102;J3KS93;J3KSN7;J3KT04;E7EMV8;Q86WD0 A0A024R8W0;A8K7F6 A8K7F6 DDX48;EIF4A3;EIF4A2;DKFZp566L241;EIF4A1 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 524.2618 2 524.260925 1046.5073 82611.4 0.34717 0.00018201 0.55389 0.00029038 0.90106 0.00047239 524.260885302802 528.268179695848 77.385 1.4601 77.385 76.817 78.277 0 344 95 6 0 0 0 0.04871 1 40561 38.55 35.181 1 1.6067 1.2933 0 13794000 5788700 8005200 13325 770;261 5070 5196 20804 20804 GIYFADMVSK 10 1 0 Oxidation (M) _GIYFADM(ox)VSK_ GIYFADM(1)VSK GIYFADM(43.28)VSK 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.7774 2 573.778625 1145.5427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.224 1 65.224 64.724 65.724 0 0 0 0 0.02734 1 38462 43.282 28.131 1 13326 139 5071 5197 20805 20805 119 GIYFADMVSK 10 1 0 Oxidation (M) _GIYFADM(ox)VSK_ GIYFADM(1)VSK GIYFADM(53.09)VSK 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.777 2 573.778625 1145.5427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.045 1 66.045 65.545 66.545 0 0 0 0 0.0103 1 39005 53.089 32.142 1 13327 139 5071 5197 20806 20806 119 GIYIDPEILEK 11 1 0 Unmodified _GIYIDPEILEK_ 0 0 0 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3536 2 645.353011 1288.69147 78209.09 0.8728 0.00056326 0.33307 0.00021495 1.2059 0.00077821 645.353492646111 649.359723292773 107.06 0.53398 107.06 106.79 107.33 0 150 40 5 0 0 0 0.0018568 1 66613 64.297 48.635 1 0.7186 0.74471 0 11246000 6403200 4842900 13328 360 5072 5198 20807 20807 GIYIDPEILEK 11 1 0 Unmodified _GIYIDPEILEK_ 0 0 0 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.3408 2 645.353011 1288.69147 80909.11 1.0765 0.0006947 0.95126 0.0006139 2.0277 0.0013086 645.35413573953 649.359845736296 106.41 0.43996 106.41 106.16 106.6 7.6294E-06 110 32 5 0 0 0 0.026048 1 67788 71.349 54.809 1 1.022 1.0627 0 11137000 5612600 5524800 13329 360 5072 5198 20808 20808 GIYIDPEILEK 11 1 0 Unmodified _GIYIDPEILEK_ 0 0 0 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.3536 2 645.353011 1288.69147 75054.87 0.85943 0.00055464 0.2775 0.00017909 1.1369 0.00073372 645.353584615548 649.360122355613 118.43 0.64456 118.43 118.05 118.69 0 114 26 8 0 0 0 0.0067996 2 69902 53.756 38.094 1 1.2065 0.95174 0 5935400 2643200 3292200 13330 360 5072 5198 20809;20810 20809 GIYPHEPK 8 1 0 Unmodified _GIYPHEPK_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.7486 2 470.747985 939.481417 88888.35 0.39145 0.00018428 0.076708 3.611E-05 0.46816 0.00022039 470.747981784808 474.754979662972 23.053 0.75475 23.053 22.887 23.642 0 124 37 8 0 0 0 0.017453 1 9056 67.032 55.47 1 0.97077 1.0933 0 116660000 57674000 58989000 13331 886 5073 5199 20811 20811 GIYPHEPK 8 1 0 Unmodified _GIYPHEPK_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.7478 2 470.747985 939.481417 88142.07 0.48357 0.00022764 -0.19081 -8.9822E-05 0.29276 0.00013782 470.747785182719 474.754851485339 22.397 0.70662 22.397 22.177 22.884 0 137 31 8 0 0 0 0.0042246 2 8412 102.72 84.093 1 1.0049 1.1255 0 111050000 53449000 57598000 13332 886 5073 5199 20812;20813 20813 GIYPHEPK 8 1 0 Unmodified _GIYPHEPK_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 316.839 3 314.167749 939.481417 107774.4 0.5512 0.00017317 -0.33192 -0.00010428 0.21928 6.8891E-05 314.167627358661 316.838896908543 22.401 0.38963 22.401 22.285 22.674 -1.9073E-06 71 16 6 0 0 0 0.0275 1 8416 30.254 17.206 1 0.97309 0.99184 0 12205000 5493400 6711300 13333 886 5073 5199 20814 20814 GIYPHEPK 8 1 0 Unmodified _GIYPHEPK_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.748 2 470.747985 939.481417 88922.38 0.16412 7.7261E-05 0.13054 6.1452E-05 0.29466 0.00013871 470.747929772494 474.755007083634 25.11 0.63858 25.11 24.836 25.474 0 148 31 8 0 0 0 0.022994 2 9030 64.567 59.972 1 1.2014 0.95959 0 20272000 9370200 10902000 13334 886 5073 5199 20815;20816 20816 GIYPHEPK 8 1 0 Unmodified _GIYPHEPK_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 474.7553 2 470.747985 939.481417 87898.04 0.30972 0.0001458 -0.16904 -7.9573E-05 0.14068 6.6225E-05 470.747805776688 474.754867479324 24.923 0.83138 24.923 24.632 25.463 0 173 44 7 0 0 0 0.031359 1 8348 51.335 44.425 1 1.1924 0.958 0 15946000 7751900 8194300 13335 886 5073 5199 20817 20817 GKDPTEHIPEIILNNFTTR 19 1 1 Unmodified _GKDPTEHIPEIILNNFTTR_ 0 0 1 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.7932 4 549.541834 2194.13823 82193.06 0.88979 0.00048897 -0.29581 -0.00016256 0.59398 0.00032642 549.541606520596 554.298043916514 115.52 0.39964 115.52 115.3 115.7 7.6294E-06 117 20 8 0 0 0 0.044022 1 67652 11.851 3.142 1 1.012 0.83476 0 4178100 2315600 1862500 13336 2048 5074 5200 20818 20818 GKDPTEHIPEIILNNFTTR 19 1 1 Unmodified _GKDPTEHIPEIILNNFTTR_ 0 0 1 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.5424 4 549.541834 2194.13823 81816.34 0.65261 0.00035864 0.26075 0.00014329 0.91337 0.00050193 549.792629139013 554.047477996499 115.22 0.39552 115.22 115.03 115.43 0 97 19 9 0 0 0 0.0018737 1 66532 29.603 29.603 1 0.84077 0.70593 0 4889400 2429900 2459500 13337 2048 5074 5200 20819 20819 GKEDALVTK 9 2 0 Unmodified _GKEDALVTK_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7855 2 480.771657 959.528761 85847.3 -0.40939 -0.00019682 0.38881 0.00018693 -0.020579 -9.8937E-06 480.77198698745 488.785510531985 18.788 0.33014 18.788 18.664 18.994 0 85 24 6 0 0 0 5.4441E-07 2 5651 139.43 104.08 1 0.70076 0.82744 0 38140000 23709000 14431000 13338 1506 5075 5201 20820;20821 20821 GKEDLQTNSFPVLLTQGLESNDFEMLNK 28 2 0 Oxidation (M) _GKEDLQTNSFPVLLTQGLESNDFEM(ox)LNK_ GKEDLQTNSFPVLLTQGLESNDFEM(1)LNK GKEDLQTNSFPVLLTQGLESNDFEM(66.03)LNK 0 1 1 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1067.5374 3 1061.85533 3182.54416 58864.61 0.70317 0.00074667 0.4121 0.00043759 1.1153 0.0011843 1062.52453539558 1067.53307967645 133.94 0.42438 133.94 133.71 134.14 0 169 20 13 0 0 0 4.0207E-16 1 80687 66.027 66.027 1 0.81404 0.69077 0 22716000 11956000 10761000 13339 1752 5076 5202 20822 20822 1601 GKEEEILK 8 2 0 Unmodified _GKEEEILK_ 0 0 1 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2663 2 473.266207 944.517862 88329.53 0.042801 2.0256E-05 -0.94008 -0.00044491 -0.89728 -0.00042465 473.266216775296 481.280355655242 22.281 0.40076 22.281 22.14 22.541 0 98 17 9 0 0 0 0.00010529 1 8304 142.04 142.04 1 0.27763 0.32156 0 54653000 41918000 12735000 13340 1965 5077 5203 20823 20823 GKLEAIITPPPAK 13 2 0 Unmodified _GKLEAIITPPPAK_ 0 0 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.907 2 667.905745 1333.79694 75104.12 0.41631 0.00027805 -0.066432 -4.437E-05 0.34987 0.00023368 667.90562341518 675.919818583663 65.073 1.1468 65.073 64.431 65.578 7.6294E-06 515 104 7 0 0 0 0.0064449 3 37600 76.165 74.392 1 0.99593 1.176 0 36902000 18485000 18417000 13341 1401 5078 5204 20824;20825;20826 20825 GKLEAIITPPPAK 13 2 0 Unmodified _GKLEAIITPPPAK_ 0 0 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.6061 3 445.606255 1333.79694 90097.71 -0.13117 -5.8448E-05 0.22474 0.00010015 0.093578 4.1699E-05 445.606349544474 450.949110574808 65.106 1.0454 65.106 64.533 65.578 0 391 94 6 0 0 0 0.036673 1 37594 23.881 18.501 1 1.0211 1.2186 0 18470000 8467300 10002000 13342 1401 5078 5204 20827 20827 GKLEAIITPPPAK 13 2 0 Unmodified _GKLEAIITPPPAK_ 0 0 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.9063 2 667.905745 1333.79694 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.543 1 64.543 64.043 65.043 0 0 0 0 0.0020263 1 37102 83.182 68.031 1 13343 1401 5078 5204 20828 20828 GKLEAIITPPPAK 13 2 0 Unmodified _GKLEAIITPPPAK_ 0 0 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.9207 2 667.905745 1333.79694 75019.85 0.53601 0.000358 0.31482 0.00021027 0.85082 0.00056827 668.407481841222 675.920063839549 62.464 1.2178 62.464 61.767 62.985 0 506 112 6 0 0 0 0.00067762 5 36754 106.49 105.45 1 1.0029 1.1613 0 51508000 25410000 26099000 13344 1401 5078 5204 20829;20830;20831;20832;20833 20832 GKLEAIITPPPAK 13 2 0 Unmodified _GKLEAIITPPPAK_ 0 0 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.9067 2 667.905745 1333.79694 73920.45 0.59045 0.00039437 0.23829 0.00015916 0.82874 0.00055352 667.905842535377 675.920064022299 73.174 1.4541 73.174 72.645 74.099 0 581 101 9 0 0 0 0.0011639 3 38503 84.053 82.85 1 0.9688 0.82298 0 40886000 21099000 19787000 13345 1401 5078 5204 20834;20835;20836 20834 GKLEAIITPPPAK 13 2 0 Unmodified _GKLEAIITPPPAK_ 0 0 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.9064 2 667.905745 1333.79694 73823.4 0.53553 0.00035769 0.32661 0.00021815 0.86214 0.00057583 667.905905221481 675.920120420629 73.375 1.4512 73.375 72.742 74.194 -7.6294E-06 589 106 9 0 0 0 0.00045844 2 37880 109.24 109.24 1 0.98669 0.83879 0 30899000 15692000 15208000 13346 1401 5078 5204 20837;20838 20838 GKLELVDNK 9 2 0 Unmodified _GKLELVDNK_ 0 0 1 B4DZQ5;A0A024QZY5;Q13523 B4DZQ5 B4DZQ5 PRPF4B Serine/threonine-protein kinase PRP4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.2929 2 508.292756 1014.57096 90271.18 0.040924 2.0802E-05 -0.40921 -0.000208 -0.36829 -0.0001872 508.292485874955 516.306468203786 27.644 0.27085 27.644 27.524 27.795 -1.9073E-06 47 14 5 0 0 0 0.03568 1 12890 63.734 45.472 1 0.5738 0.65561 0 14890000 11389000 3500900 13347 33 5079 5205 20839 20839 GKLPIVNEDDELVAIIAR 18 1 1 Unmodified _GKLPIVNEDDELVAIIAR_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 983.0563 2 983.054397 1964.09424 64467.52 0.6136 0.0006032 -0.41731 -0.00041024 0.19629 0.00019297 983.555073700912 992.065358534892 117.11 0.5957 117.11 116.75 117.35 0 112 43 5 0 0 0 0.00037895 1 74776 51.875 51.875 1 1.5804 1.7115 0 10247000 4613600 5633200 13348 1282 5080 5206 20840 20840 GKLPIVNEDDELVAIIAR 18 1 1 Unmodified _GKLPIVNEDDELVAIIAR_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 992.0673 2 983.054397 1964.09424 62144.79 0.49181 0.00048348 -0.13245 -0.00013021 0.35936 0.00035327 983.555874895274 992.065494607483 116.2 0.44862 116.2 115.96 116.41 0 90 28 5 0 0 0 0.00031804 1 75875 55.314 55.314 1 1.3873 1.5608 0 13450000 6303500 7146300 13349 1282 5080 5206 20841 20841 GKPDLNTALPVR 12 1 1 Unmodified _GKPDLNTALPVR_ 0 0 1 O95983;B3KMA8;K7EIE8;A0A087WT34;A0A087X1H1;A0A0A0MTS6 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.8799 2 640.869694 1279.72483 78761.05 0.6729 0.00043124 -0.37563 -0.00024073 0.29727 0.00019051 640.869306016974 649.880795335809 64.971 0.65233 64.971 64.73 65.383 7.6294E-06 104 36 4 0 0 0 0.0019906 1 33482 72.006 72.006 1 1.6509 1.4141 0 2759100 1132400 1626700 13350 1432 5081 5207 20842 20842 GKPDLNTTLPIR 12 1 1 Unmodified _GKPDLNTTLPIR_ 0 0 1 Q9UBB5;O60535;J3KSA7 Q9UBB5 Q9UBB5 MBD2;NY-CO-41 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.8945 2 662.882801 1323.75105 75538.38 0.40724 0.00026996 0.18073 0.0001198 0.58797 0.00038976 662.882949591588 671.894260681671 62.916 0.62167 62.916 62.693 63.315 3.8147E-06 226 53 6 0 0 0 0.0010418 2 36973 77.379 70.491 1 0.87335 0.99616 0 20302000 10593000 9709400 13351 2096 5082 5208 20843;20844 20844 GKPDLNTTLPIR 12 1 1 Unmodified _GKPDLNTTLPIR_ 0 0 1 Q9UBB5;O60535;J3KSA7 Q9UBB5 Q9UBB5 MBD2;NY-CO-41 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.2649 3 442.257626 1323.75105 90234.98 -0.084506 -3.7373E-05 0.23929 0.00010583 0.15479 6.8457E-05 442.257667180371 448.265281735849 62.968 0.66535 62.968 62.663 63.328 3.8147E-06 264 57 6 0 0 0 0.02396 1 36929 32.068 17.81 1 0.94301 1.0839 0 25797000 10911000 14886000 13352 2096 5082 5208 20845 20845 GKPEIVGSNLDTLVSIGLDEK 21 2 0 Unmodified _GKPEIVGSNLDTLVSIGLDEK_ 0 0 1 B3KMS0;Q15021;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.0734 3 728.730119 2183.16853 70891.86 0.73425 0.00053507 -0.015172 -1.1056E-05 0.71908 0.00052402 729.064376146067 734.407173821585 114.65 1.1386 114.65 114.29 115.43 0 551 76 11 0 0 0 1.5761E-08 3 72984 74.364 74.364 1 0.8589 1.0136 0 107630000 54437000 53193000 13353 908 5083 5209 20846;20847;20848 20848 GKPEIVGSNLDTLVSIGLDEK 21 2 0 Unmodified _GKPEIVGSNLDTLVSIGLDEK_ 0 0 1 B3KMS0;Q15021;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1093.0953 2 1092.59154 2183.16853 58701.57 0.1176 0.00012849 0.28758 0.0003142 0.40518 0.00044269 1093.09375706085 1100.6056488353 114.62 0.36953 114.62 114.42 114.79 0 56 25 5 0 0 0 0.00045066 1 72759 56.599 56.599 1 0.99443 1.1835 0 17538000 8920500 8617000 13354 908 5083 5209 20849 20849 GKPEIVGSNLDTLVSIGLDEK 21 2 0 Unmodified _GKPEIVGSNLDTLVSIGLDEK_ 0 0 1 B3KMS0;Q15021;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.0729 3 728.730119 2183.16853 70768.18 0.63956 0.00046606 0.017436 1.2706E-05 0.65699 0.00047877 729.064439244682 734.072862220927 113.95 1.1727 113.95 113.54 114.71 0 581 82 10 0 0 0 6.2874E-08 3 73784 64.295 64.295 1 0.86942 1.0102 0 120870000 64046000 56826000 13355 908 5083 5209 20850;20851;20852 20850 GKPEIVGSNLDTLVSIGLDEK 21 2 0 Unmodified _GKPEIVGSNLDTLVSIGLDEK_ 0 0 1 B3KMS0;Q15021;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1100.6046 2 1092.59154 2183.16853 60204.18 0.074753 8.1675E-05 0.0018723 2.0457E-06 0.076626 8.3721E-05 1093.09312305417 1101.10703140815 113.88 0.50618 113.88 113.68 114.18 0 179 37 6 0 0 0 0.025903 1 73950 30.133 30.133 1 0.87883 1.0059 0 18739000 9887300 8851700 13356 908 5083 5209 20853 20853 GKPEIVGSNLDTLVSIGLDEK 21 2 0 Unmodified _GKPEIVGSNLDTLVSIGLDEK_ 0 0 1 B3KMS0;Q15021;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 734.4076 3 728.730119 2183.16853 70771.27 0.91422 0.00066622 0.10611 7.7327E-05 1.0203 0.00074354 729.064453437316 734.073042798502 125.69 0.88203 125.69 125.22 126.1 7.6294E-06 248 36 13 0 0 0 1.681E-07 2 75362 60.133 60.133 1 1.5012 1.2721 0 65642000 26113000 39528000 13357 908 5083 5209 20854;20855 20854 GKPEIVGSNLDTLVSIGLDEK 21 2 0 Unmodified _GKPEIVGSNLDTLVSIGLDEK_ 0 0 1 B3KMS0;Q15021;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1100.605 2 1092.59154 2183.16853 57761.22 0.309 0.00033761 0.3655 0.00039934 0.6745 0.00073695 1092.59186209613 1100.60611574435 125.57 0.50368 125.57 125.41 125.91 0 105 20 8 0 0 0 0.023204 1 75524 37.645 37.645 1 1.616 1.3792 0 16490000 6122700 10367000 13358 908 5083 5209 20856 20856 GKPEIVGSNLDTLVSIGLDEK 21 2 0 Unmodified _GKPEIVGSNLDTLVSIGLDEK_ 0 0 1 B3KMS0;Q15021;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.0734 3 728.730119 2183.16853 70756.14 0.80602 0.00058737 0.10485 7.641E-05 0.91088 0.00066378 729.064562828021 734.407241774721 125.48 0.74216 125.48 125.08 125.82 -7.6294E-06 242 32 14 0 0 0 0.035906 1 74331 17.762 17.762 1 1.5537 1.3284 0 81952000 32233000 49719000 13359 908 5083 5209 20857 20857 GKPGFQGQSSSQAQQVIK 18 2 0 Unmodified _GKPGFQGQSSSQAQQVIK_ 0 0 1 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.6624 3 625.662151 1873.96462 NaN NaN NaN -0.66025 -0.00041309 NaN NaN NaN NaN 33.349 0.17566 33.349 33.286 33.461 0 0 0 0 0.021142 1 16609 37.851 31.434 1 NaN NaN 0 4661400 4661400 0 13360 2109 5084 5210 20858 20858 GKSEVPEDLAGFIELFQTPSHTK 23 2 0 Unmodified _GKSEVPEDLAGFIELFQTPSHTK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.5844 4 633.326056 2529.27512 80180.02 0.99245 0.00062854 -0.84045 -0.00053228 0.152 9.6263E-05 633.576226060204 637.33260398854 134.11 0.28952 134.11 133.94 134.23 0 56 12 8 0 0 0 0.014378 1 81761 19.411 19.411 1 4.7131 4.0796 0 3697300 930380 2766900 13361 1569 5085 5211 20859 20859 GKSEVPEDLAGFIELFQTPSHTK 23 2 0 Unmodified _GKSEVPEDLAGFIELFQTPSHTK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.7769 3 844.098983 2529.27512 NaN NaN NaN -0.69208 -0.00058419 NaN NaN NaN NaN 134.11 0.32816 134.11 133.94 134.26 0 0 0 0 0.0048753 1 81807 36.9 29.366 1 NaN NaN 0 8256100 0 8256100 13362 1569 5085 5211 20860 20860 GKVEEVELPVEK 12 2 0 Unmodified _GKVEEVELPVEK_ 0 0 1 E9PKG1;Q5U8W9;H7C2I1;Q99873;A0A087X1W2;E9PNR9;E9PQ98;E9PIX6;H0YDE4;B4DJ87;Q59GT2;Q9NR22 E9PKG1 E9PKG1 PRMT1;HRMT1L2;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3889 2 678.374475 1354.7344 NaN NaN NaN 0.53048 0.00035986 NaN NaN NaN NaN 53.085 0.44019 53.085 52.873 53.313 0 0 0 0 0.035508 1 30281 67.08 56.848 1 NaN NaN 0 6988700 0 6988700 13363 1243 5086 5212 20861 20861 GKVEIDQQQLTQQQLNGN 18 1 0 Unmodified _GKVEIDQQQLTQQQLNGN_ 0 0 1 A0A0D9SGE8;Q8IWS0;B4E138 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1025.0254 2 1021.01907 2040.0236 61158.19 0.16457 0.00016802 0.29419 0.00030038 0.45876 0.0004684 1021.01939014878 1025.02624759635 72.941 0.42798 72.941 72.742 73.17 0 168 35 6 0 0 0 4.732E-05 1 37690 80.905 80.905 1 1.1119 0.86886 0 3687500 1936900 1750600 13364 528 5087 5213 20862 20862 GLAEVAVK 8 1 0 Unmodified _GLAEVAVK_ 0 0 0 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.7469 2 393.739628 785.464704 97372.9 0.43073 0.0001696 0.041495 1.6338E-05 0.47223 0.00018594 393.739529743302 397.746695206616 41.643 0.52187 41.643 41.435 41.957 0 130 42 4 0 0 0 0.011407 1 21944 69.998 29.313 1 1.2858 1.2598 0 22306000 10867000 11438000 13365 780 5088 5214 20863 20863 GLAEVAVK 8 1 0 Unmodified _GLAEVAVK_ 0 0 0 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.7466 2 393.739628 785.464704 96557.19 0.23902 9.4111E-05 0.2829 0.00011139 0.52192 0.0002055 393.739603665616 397.746765701805 40.55 0.3831 40.55 40.386 40.769 0 105 29 5 0 0 0 0.0057846 2 21641 89.369 37.173 1 1.2083 1.3621 0 61017000 25505000 35512000 13366 780 5088 5214 20864;20865 20864 GLAFELVYSPAIK 13 1 0 Unmodified _GLAFELVYSPAIK_ 0 0 0 Q5VU10;P78346;B4DJR3;Q5VU11 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.3978 2 704.397753 1406.78095 74932.84 0.90441 0.00063706 -0.30986 -0.00021826 0.59455 0.0004188 704.397220042406 708.404394411652 116.95 0.42156 116.95 116.72 117.14 0 97 27 6 0 0 0 0.0030631 1 74850 62.303 62.303 1 1.6331 1.6407 0 7420400 2551900 4868500 13367 1663 5089 5215 20866 20866 GLAFELVYSPAIK 13 1 0 Unmodified _GLAFELVYSPAIK_ 0 0 0 Q5VU10;P78346;B4DJR3;Q5VU11 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.4047 2 704.397753 1406.78095 73822.17 0.76908 0.00054174 -0.16679 -0.00011749 0.60229 0.00042425 704.397537936409 708.404574746736 116.36 0.43875 116.36 116.16 116.6 0 94 24 5 0 0 0 0.00013105 1 76224 79.693 79.693 1 1.6895 1.7371 0 9526200 3380200 6145900 13368 1663 5089 5215 20867 20867 GLAFELVYSPAIK 13 1 0 Unmodified _GLAFELVYSPAIK_ 0 0 0 Q5VU10;P78346;B4DJR3;Q5VU11 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.4047 2 704.397753 1406.78095 76568.34 0.83732 0.00058981 0.64435 0.00045388 1.4817 0.0010437 704.399170505848 708.404842923357 128.47 0.56775 128.47 128.32 128.89 0 64 22 5 0 0 0 0.0013051 2 76744 58.37 58.37 1 1.1588 1.022 0 922630 435380 487250 13369 1663 5089 5215 20868;20869 20868 GLAFLDELR 9 0 1 Unmodified _GLAFLDELR_ 0 0 0 Q68CP9 Q68CP9 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2921 2 517.287474 1032.5604 86085.91 0.68322 0.00035342 -0.21517 -0.00011131 0.46804 0.00024211 517.28731046003 522.29139062744 111 0.47126 111 110.79 111.26 0 75 30 4 0 0 0 0.003784 3 69730 70.919 52.136 1 0.78517 0.79002 0 9330900 5338200 3992700 13370 1839 5090 5216 20870;20871;20872 20870 GLAFLDELR 9 0 1 Unmodified _GLAFLDELR_ 0 0 0 Q68CP9 Q68CP9 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.2866 2 517.287474 1032.5604 86906.54 0.49384 0.00025546 -0.14207 -7.3492E-05 0.35176 0.00018196 517.287210424348 522.291686477133 110.34 0.47477 110.34 110.11 110.58 0 96 32 5 0 0 0 0.003784 2 70929 70.919 52.228 1 0.68809 0.68498 0 7972700 4111700 3861000 13371 1839 5090 5216 20873;20874 20873 GLAFLDELR 9 0 1 Unmodified _GLAFLDELR_ 0 0 0 Q68CP9 Q68CP9 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.2874 2 517.287474 1032.5604 86327.52 0.55441 0.00028679 -0.1392 -7.2008E-05 0.41521 0.00021478 517.287297729267 522.291481587148 122.04 0.34544 122.04 121.91 122.25 0 40 15 4 0 0 0 0.010479 2 72767 59.245 59.245 1 1.3463 1.1694 0 2272600 825190 1447400 13372 1839 5090 5216 20875;20876 20876 GLAFLDELR 9 0 1 Unmodified _GLAFLDELR_ 0 0 0 Q68CP9 Q68CP9 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.2878 2 517.287474 1032.5604 88386.55 0.59139 0.00030592 0.16693 8.635E-05 0.75832 0.00039227 517.28748343307 522.291532638478 121.83 0.30727 121.83 121.7 122.01 0 36 12 5 0 0 0 0.037381 2 71678 43.083 43.083 1 1.6182 1.3899 0 2804800 1102900 1701900 13373 1839 5090 5216 20877;20878 20878 GLAITFVSDENDAK 14 1 0 Unmodified _GLAITFVSDENDAK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;B4DP52;H0Y400;O00148;B4DX78;Q69YT6 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3793 2 740.369921 1478.72529 67860.1 0.90266 0.0006683 0.073831 5.4662E-05 0.97649 0.00072296 740.369993087186 744.377299615052 90.287 1.2169 90.287 89.563 90.78 0 399 102 6 0 0 0 1.5139E-14 4 54632 133.07 133.07 1 1.4044 1.5151 0 41694000 18247000 23448000 13374 1359;362 5091 5217 20879;20880;20881;20882 20882 GLAITFVSDENDAK 14 1 0 Unmodified _GLAITFVSDENDAK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;B4DP52;H0Y400;O00148;B4DX78;Q69YT6 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.3777 2 740.369921 1478.72529 69179.18 0.67322 0.00049843 -0.0010243 -7.5835E-07 0.67219 0.00049767 740.871321597418 744.377204048069 89.383 1.1704 89.383 88.697 89.867 0 371 96 6 0 0 0 3.2055E-09 4 55306 113.63 113.63 1 1.4592 1.6339 0 82652000 37271000 45381000 13375 1359;362 5091 5217 20883;20884;20885;20886 20886 GLAPDLPEDLYHLIK 15 1 0 Unmodified _GLAPDLPEDLYHLIK_ 0 0 0 P62277;J3KMX5 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.3161 3 565.310167 1692.90867 79982.39 0.79518 0.00044952 -0.37049 -0.00020944 0.42468 0.00024008 565.310005806489 568.315541183659 121.19 1.057 121.19 120.74 121.8 0 480 70 11 0 0 0 0.00043328 2 78016 38.399 38.399 1 1.1295 1.2822 0 161040000 72836000 88200000 13376 1640 5092 5218 20887;20888 20887 GLAPDLPEDLYHLIK 15 1 0 Unmodified _GLAPDLPEDLYHLIK_ 0 0 0 P62277;J3KMX5 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.3163 3 565.310167 1692.90867 79697.57 1.0104 0.0005712 -0.35189 -0.00019893 0.65853 0.00037227 565.310006719562 567.981277690892 120.49 1.2888 120.49 120.06 121.34 0 576 87 11 0 0 0 0.00052956 3 79382 48.823 48.823 1 1.1338 1.311 0 200570000 91633000 108940000 13377 1640 5092 5218 20889;20890;20891 20889 GLAPDLPEDLYHLIK 15 1 0 Unmodified _GLAPDLPEDLYHLIK_ 0 0 0 P62277;J3KMX5 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 851.4694 2 847.461613 1692.90867 66397.55 1.066 0.00090339 0.020875 1.769E-05 1.0869 0.00092108 847.460944783112 851.469077146668 120.5 0.72746 120.5 120.16 120.89 0 308 51 8 0 0 0 1.0066E-10 2 79539 122.69 122.69 1 1.1125 1.2328 0 46886000 22171000 24715000 13378 1640 5092 5218 20892;20893 20893 GLAPDLPEDLYHLIK 15 1 0 Unmodified _GLAPDLPEDLYHLIK_ 0 0 0 P62277;J3KMX5 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.645 3 565.310167 1692.90867 80047.31 1.1301 0.00063884 -0.48272 -0.00027289 0.64736 0.00036596 565.309833500875 567.981225634823 132.91 0.77397 132.91 132.69 133.47 0 222 36 11 0 0 0 2.0433E-05 2 80830 65.374 65.374 1 0.8675 0.71109 0 36367000 19951000 16416000 13379 1640 5092 5218 20894;20895 20895 GLAPDLPEDLYHLIK 15 1 0 Unmodified _GLAPDLPEDLYHLIK_ 0 0 0 P62277;J3KMX5 P62277 P62277 RPS13 40S ribosomal protein S13 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 851.4708 2 847.461613 1692.90867 NaN NaN NaN -0.20027 -0.00016972 NaN NaN NaN NaN 132.94 0.41666 132.94 132.75 133.17 0 0 0 0 2.355E-10 1 80878 109.24 91.869 1 NaN NaN 0 3851500 0 3851500 13380 1640 5092 5218 20896 20896 GLAPDLPEDLYHLIK 15 1 0 Unmodified _GLAPDLPEDLYHLIK_ 0 0 0 P62277;J3KMX5 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.981 3 565.310167 1692.90867 79740.12 1.1553 0.0006531 -0.69901 -0.00039516 0.45628 0.00025794 565.309776477102 567.98110685723 132.63 0.64133 132.63 132.38 133.02 -1.5259E-05 172 28 11 0 0 0 0.0015029 2 79660 40.278 40.278 1 0.79965 0.65697 0 27849000 15290000 12558000 13381 1640 5092 5218 20897;20898 20897 GLAPDLPEDLYHLIK 15 1 0 Unmodified _GLAPDLPEDLYHLIK_ 0 0 0 P62277;J3KMX5 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 851.4688 2 847.461613 1692.90867 66465.22 1.2268 0.0010397 -0.7573 -0.00064179 0.4695 0.00039789 847.459958153655 851.970329633039 132.61 0.44846 132.61 132.44 132.89 1.5259E-05 81 19 7 0 0 0 0.00014054 1 79734 80.014 80.014 1 0.86643 0.70669 0 7807700 3875200 3932500 13382 1640 5092 5218 20899 20899 GLAPNTPGK 9 1 0 Unmodified _GLAPNTPGK_ 0 0 0 A0A024RC67;O43663;G3V3N7;H0YL53 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.7402 2 427.74016 853.465767 95749.23 -0.50188 -0.00021467 0.35879 0.00015347 -0.14309 -6.1204E-05 427.740278021429 431.747271491946 23.3 0.34027 23.3 23.103 23.443 0 51 16 5 0 0 0 0.0064086 2 9171 64.265 37.881 1 0.74052 0.72953 0 9157700 4989400 4168300 13383 353 5093 5219 20900;20901 20900 GLAPNTPGK 9 1 0 Unmodified _GLAPNTPGK_ 0 0 0 A0A024RC67;O43663;G3V3N7;H0YL53 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.74 2 427.74016 853.465767 94173.38 -0.36871 -0.00015771 0.35242 0.00015075 -0.01629 -6.968E-06 427.740293893522 431.747199737608 23.071 0.26541 23.071 22.937 23.202 0 40 10 5 0 0 0 0.0074668 1 9037 61.962 35.578 1 0.71099 0.72646 0 11966000 7065100 4900500 13384 353 5093 5219 20902 20902 GLAQADGTLITCVDSGILR 19 0 1 Unmodified _GLAQADGTLITCVDSGILR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.0139 2 980.512039 1959.00953 61326.18 0.45763 0.00044871 0.22314 0.00021879 0.68077 0.0006675 981.013570557695 985.517063473374 115.1 0.75439 115.1 114.85 115.61 0 206 48 8 0 0 0 5.1967E-12 1 73084 105.19 105.19 1 0.85902 0.87872 0 35292000 18247000 17045000 13385 1859 5094 5220 20903 20903 GLAQADGTLITCVDSGILR 19 0 1 Unmodified _GLAQADGTLITCVDSGILR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 980.5137 2 980.512039 1959.00953 62086.43 0.29673 0.00029095 0.27171 0.00026641 0.56844 0.00055736 981.013532246984 985.517032720718 114.58 0.45705 114.58 114.36 114.82 0 189 28 8 0 0 0 1.7647E-08 1 74474 96.591 89.961 1 0.8919 0.98149 0 40909000 19565000 21344000 13386 1859 5094 5220 20904 20904 GLAQADGTLITCVDSGILR 19 0 1 Unmodified _GLAQADGTLITCVDSGILR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 981.0145 2 980.512039 1959.00953 60812.86 0.33046 0.00032402 0.52781 0.00051752 0.85827 0.00084154 981.01375142092 986.018755841135 126.77 0.77957 126.77 126.36 127.14 0 163 30 10 0 0 0 1.4263E-22 2 76270 130.61 130.61 1 1.1965 1.0167 0 34055000 15050000 19005000 13387 1859 5094 5220 20905;20906 20906 GLAQADGTLITCVDSGILR 19 0 1 Unmodified _GLAQADGTLITCVDSGILR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 981.0142 2 980.512039 1959.00953 61352.59 0.20731 0.00020327 0.44671 0.000438 0.65402 0.00064127 981.013581697239 985.51702616948 126.69 0.69725 126.69 126.25 126.95 0 177 30 10 0 0 0 4.3323E-51 2 75284 169.79 158.87 1 1.213 1.0581 0 33341000 15406000 17936000 13388 1859 5094 5220 20907;20908 20907 GLASPLGHR 9 0 1 Unmodified _GLASPLGHR_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.2592 2 454.259051 906.503549 NaN NaN NaN 0.31961 0.00014518 NaN NaN NaN NaN 28.995 0.21909 28.995 28.85 29.069 0 0 0 0 0.026469 1 13914 54.611 25.462 1 NaN NaN 0 29487000 29487000 0 13389 1938 5095 5221 20909 20909 GLASPLGHR 9 0 1 Unmodified _GLASPLGHR_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 303.1756 3 303.175126 906.503549 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.985 1 28.985 28.485 29.485 0 0 0 0 0.009324 1 13885 58.426 33.435 1 13390 1938 5095 5221 20910 20910 GLASPLGHR 9 0 1 Unmodified _GLASPLGHR_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 303.1752 3 303.175126 906.503549 111099.2 0.38895 0.00011792 -0.29029 -8.8009E-05 0.098656 2.991E-05 303.174941921389 306.511025552407 28.152 0.17767 28.152 28.025 28.203 1.9073E-06 28 8 6 0 0 0 0.0059202 2 13381 51.346 21.986 1 0.99378 1.0458 0 23159000 10411000 12748000 13391 1938 5095 5221 20911;20912 20912 GLAYVEYENESQASQAVMK 19 1 0 Oxidation (M) _GLAYVEYENESQASQAVM(ox)K_ GLAYVEYENESQASQAVM(1)K GLAYVEYENESQASQAVM(41.4)K 0 1 0 Q15020;B4DYA2;H0YHU8 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1071.0039 2 1066.99388 2131.9732 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.412 1 71.412 70.912 71.912 0 0 0 0 0.0095333 1 42802 41.401 36.224 1 13392 1748 5096 5222 20913 20913 1598 GLCAIAQAESLR 12 0 1 Unmodified _GLCAIAQAESLR_ 0 0 0 P23396;Q53G83;F2Z2S8;H0YCJ7;H0YF32;A7E2S3;Q9NQS8 P23396 P23396 RPS3 40S ribosomal protein S3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.8423 2 644.837536 1287.66052 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.86 1 76.86 76.36 77.36 0 0 0 0 9.314E-08 1 46435 107.21 72.953 1 13393 1511 5097 5223 20914 20914 GLCAIAQAESLR 12 0 1 Unmodified _GLCAIAQAESLR_ 0 0 0 P23396;Q53G83;F2Z2S8;H0YCJ7;H0YF32;A7E2S3;Q9NQS8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.3034 2 644.837536 1287.66052 75620.94 0.56509 0.00036439 -0.58355 -0.0003763 -0.018465 -1.1907E-05 644.837608989953 649.841841019694 89.891 0.86568 89.891 89.357 90.222 0 285 59 10 0 0 0 0.0031385 1 49681 86.898 70.128 1 0.91646 0.77072 0 27119000 14181000 12937000 13394 1511 5097 5223 20915 20915 GLCAIAQAESLR 12 0 1 Unmodified _GLCAIAQAESLR_ 0 0 0 P23396;Q53G83;F2Z2S8;H0YCJ7;H0YF32;A7E2S3;Q9NQS8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.8372 2 644.837536 1287.66052 75650.98 0.41533 0.00026782 0.12386 7.9869E-05 0.53919 0.00034769 644.837662845473 649.841864052011 89.821 0.65594 89.821 89.575 90.231 0 245 43 10 0 0 0 0.00024011 2 48818 86.898 78.678 1 0.92651 0.8082 0 28852000 14169000 14683000 13395 1511 5097 5223 20916;20917 20917 GLCESVVEADLVEALEK 17 1 0 Unmodified _GLCESVVEADLVEALEK_ 0 0 0 B7WPG3;C9IYN3;A8K894;D6W592;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9;A0A0S2Z610;C9JJZ7;H7BXH8 B7WPG3 B7WPG3 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 935.4736 2 930.966599 1859.91864 64134.73 0.91266 0.00084966 -0.6456 -0.00060104 0.26706 0.00024862 930.96671884457 935.473686222794 125.26 0.35217 125.26 125.07 125.42 0 63 23 4 0 0 0 0.0001499 2 81364 54.871 49.147 1 1.5011 1.534 0 4383000 1837100 2545800 13396 586 5098 5224 20918;20919 20918 GLDFALLQK 9 1 0 Unmodified _GLDFALLQK_ 0 0 0 Q9UK43;Q95HA6;B2R5Y4;Q13123;Q9Y3Z5;D6REL4;Q9H4P6;E7EQZ7 Q9UK43 Q9UK43 CSA2;IK;DKFZp564B112 Protein Red MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.7933 2 502.792392 1003.57023 87942.95 0.4186 0.00021047 0.50608 0.00025445 0.92468 0.00046492 502.792531482222 506.799473010064 101.5 0.64993 101.5 101.26 101.91 7.6294E-06 128 49 4 0 0 0 0.00036965 3 62332 100.45 63.75 1 1.1472 1.165 0 6491600 2781700 3709900 13397 838 5099 5225 20920;20921;20922 20920 GLDFALLQK 9 1 0 Unmodified _GLDFALLQK_ 0 0 0 Q9UK43;Q95HA6;B2R5Y4;Q13123;Q9Y3Z5;D6REL4;Q9H4P6;E7EQZ7 Q9UK43 Q9UK43 CSA2;IK;DKFZp564B112 Protein Red MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.7932 2 502.792392 1003.57023 88094.45 0.2265 0.00011388 0.22554 0.0001134 0.45204 0.00022728 502.792475936611 506.799476292928 100.76 0.68761 100.76 100.43 101.12 0 142 54 4 0 0 0 0.0013562 2 63315 86.472 58.05 1 1.067 1.0789 0 8813100 4794100 4019000 13398 838 5099 5225 20923;20924 20924 GLDIEGVK 8 1 0 Unmodified _GLDIEGVK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.7419 2 415.734543 829.454533 94169.27 0.21042 8.7479E-05 0.12268 5.1004E-05 0.3331 0.00013848 415.734365183324 419.741659182007 54.147 0.59962 54.147 53.956 54.556 0 219 48 7 0 0 0 0.033206 2 30315 50.127 8.4742 1 0.9192 1.0379 0 80698000 46099000 34600000 13399 899;1099 5100 5226 20925;20926 20925 GLDIEGVK 8 1 0 Unmodified _GLDIEGVK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 419.7429 2 415.734543 829.454533 93837.77 0.029135 1.2113E-05 0.3717 0.00015453 0.40083 0.00016664 415.734812298709 419.741642610917 52.791 1.1122 52.791 52.597 53.709 0 263 99 6 0 0 0 0.0083247 2 30091 79.116 20.135 1 0.91342 1.0231 0 81872000 44200000 37672000 13400 899;1099 5100 5226 20927;20928 20927 GLDIPEVDLVIQSSPPK 17 1 0 Unmodified _GLDIPEVDLVIQSSPPK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 908.5049 2 903.996017 1805.97748 63579.55 0.76625 0.00069268 0.032333 2.9229E-05 0.79858 0.00072191 903.99593399889 908.002975834056 121.09 0.73655 121.09 120.71 121.45 7.6294E-06 286 45 10 0 0 0 7.9376E-07 2 78069 92.856 92.856 1 1.1358 1.2857 0 152500000 72186000 80312000 13401 2065 5101 5227 20929;20930 20930 GLDIPEVDLVIQSSPPK 17 1 0 Unmodified _GLDIPEVDLVIQSSPPK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 908.5042 2 903.996017 1805.97748 63552.92 0.88433 0.00079943 0.22155 0.00020028 1.1059 0.00099971 903.996130407206 908.003249008248 120.69 0.54641 120.69 120.4 120.94 7.6294E-06 304 38 10 0 0 0 2.9056E-07 2 79630 97.463 97.463 1 1.1574 1.3416 0 214920000 101150000 113780000 13402 2065 5101 5227 20931;20932 20932 GLDIPEVDLVIQSSPPK 17 1 0 Unmodified _GLDIPEVDLVIQSSPPK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 908.0037 2 903.996017 1805.97748 63960.68 0.58905 0.0005325 0.25848 0.00023367 0.84753 0.00076617 903.996298290578 908.00330166832 133.57 0.68993 133.57 133.35 134.04 0 212 27 11 0 0 0 4.0398E-05 2 81279 79.633 79.633 1 1.1939 0.99117 0 45889000 20665000 25225000 13403 2065 5101 5227 20933;20934 20933 GLDIPEVDLVIQSSPPK 17 1 0 Unmodified _GLDIPEVDLVIQSSPPK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 904.4986 2 903.996017 1805.97748 63805.21 0.80443 0.0007272 0.1473 0.00013316 0.95173 0.00086036 903.996231327434 908.003248938305 133.36 0.56078 133.36 133.15 133.71 0 170 21 10 0 0 0 4.9011E-05 3 80237 77.912 77.912 1 1.179 0.97503 0 32652000 15708000 16944000 13404 2065 5101 5227 20935;20936;20937 20937 GLDIPEVDWIVQYDPPDDPK 20 1 0 Unmodified _GLDIPEVDWIVQYDPPDDPK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1157.0627 2 1156.06007 2310.10559 56165.83 0.26908 0.00031107 0.042399 4.9016E-05 0.31148 0.00036009 1156.56145090436 1160.56826772113 130.38 0.54626 130.38 130.13 130.67 0 287 35 10 0 0 0 0.0063545 1 84913 26.532 26.532 1 0.92717 0.99711 0 38731000 20892000 17840000 13405 303 5102 5228 20938 20938 GLDIPEVDWIVQYDPPDDPK 20 1 0 Unmodified _GLDIPEVDWIVQYDPPDDPK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1156.563 2 1156.06007 2310.10559 56568.2 0.17031 0.00019688 0.049874 5.7657E-05 0.22018 0.00025454 1156.56150080893 1160.56841272355 130.08 0.56027 130.08 129.8 130.36 0 325 39 11 0 0 0 0.00058251 1 86808 36.292 36.292 1 0.93268 1.0363 0 50118000 26391000 23727000 13406 303 5102 5228 20939 20939 GLDISHISQR 10 0 1 Unmodified _GLDISHISQR_ 0 0 0 Q8N1F7;A8K897;H3BVG0;H3BV11;H3BRI8;H3BM93;H3BNN5 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.308 2 563.304187 1124.59382 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.993 1 44.993 44.493 45.493 0 0 0 0 0.00024632 1 24206 78.113 41.352 1 13407 1904 5103 5229 20940 20940 GLDISNVK 8 1 0 Unmodified _GLDISNVK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A0J9YVQ7 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.4463 1 845.472709 844.465432 68924.23 0.86889 0.00073462 0.051537 4.3573E-05 0.92043 0.0007782 845.472554888337 853.486726990976 42.767 0.41868 42.767 42.592 43.011 0 86 34 4 0 0 0 0.028979 1 22749 95.815 49.863 1 0.98708 1.0032 0 13793000 5662600 8130000 13408 522 5104 5230 20941 20941 GLDISNVK 8 1 0 Unmodified _GLDISNVK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A0J9YVQ7 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 853.9612 1 845.472709 844.465432 69012.63 1.0008 0.00084611 -0.34074 -0.00028808 0.66002 0.00055803 845.472533576881 853.486686485568 41.56 0.38112 41.56 41.401 41.782 0 103 31 4 0 0 0 0.019189 1 22296 107.29 55.865 1 1.1116 1.1675 0 23986000 12919000 11067000 13409 522 5104 5230 20942 20942 GLDNTEFQGK 10 1 0 Unmodified _GLDNTEFQGK_ 0 0 0 A8K9U0;Q9BWF3;E9PB51;Q9BQ04 A8K9U0 A8K9U0 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.7744 2 554.767103 1107.51965 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.837 1 33.837 33.337 34.337 0 0 0 0 3.8391E-05 1 16869 89.698 34.167 1 13410 788 5105 5231 20943 20943 GLDNTEFQGK 10 1 0 Unmodified _GLDNTEFQGK_ 0 0 0 A8K9U0;Q9BWF3;E9PB51;Q9BQ04 A8K9U0 A8K9U0 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.7677 2 554.767103 1107.51965 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.94 1 38.94 38.44 39.44 0 0 0 0 0.037554 1 17746 47.869 22.993 1 13411 788 5105 5231 20944 20944 GLDNTEFQGK 10 1 0 Unmodified _GLDNTEFQGK_ 0 0 0 A8K9U0;Q9BWF3;E9PB51;Q9BQ04 A8K9U0 A8K9U0 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.7751 2 554.767103 1107.51965 84153.87 0.3214 0.0001783 0.064096 3.5558E-05 0.3855 0.00021386 554.767045898588 558.7742797499 39.046 0.33303 39.046 38.828 39.161 0 60 25 4 0 0 0 0.033417 1 17307 41.427 15.868 1 0.92761 0.76941 0 1577100 736000 841060 13412 788 5105 5231 20945 20945 GLDPVEILQER 11 0 1 Unmodified _GLDPVEILQER_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.8465 2 634.845884 1267.67722 77056.45 0.63543 0.0004034 0.18631 0.00011828 0.82174 0.00052168 634.846015720038 639.850279497707 105.74 0.79252 105.74 105.39 106.18 0 270 58 8 0 0 0 5.2644E-08 2 65442 117.02 97.236 1 0.74437 0.75746 0 29829000 17832000 11997000 13413 695 5106 5232 20946;20947 20946 GLDPVEILQER 11 0 1 Unmodified _GLDPVEILQER_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8506 2 634.845884 1267.67722 76503.54 0.72851 0.00046249 0.2259 0.00014341 0.95441 0.0006059 634.84605017334 639.85028019403 105.12 0.73053 105.12 104.69 105.42 7.6294E-06 294 56 7 0 0 0 8.4595E-06 2 66679 109.42 89.632 1 0.76953 0.86274 0 45335000 24751000 20584000 13414 695 5106 5232 20948;20949 20949 GLDPVEILQER 11 0 1 Unmodified _GLDPVEILQER_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.8514 2 634.845884 1267.67722 NaN NaN NaN 0.34125 0.00021664 NaN NaN NaN NaN 117.22 0.57817 117.22 116.98 117.55 -7.6294E-06 0 0 0 0.0015808 1 68944 82.261 62.474 1 NaN NaN 0 7390700 0 7390700 13415 695 5106 5232 20950 20950 GLDPVEILQER 11 0 1 Unmodified _GLDPVEILQER_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.8519 2 634.845884 1267.67722 NaN NaN NaN 0.31262 0.00019847 NaN NaN NaN NaN 117.07 0.60812 117.07 116.79 117.4 0 0 0 0 0.0049602 1 67894 65.5 50.35 1 NaN NaN 0 8331700 0 8331700 13416 695 5106 5232 20951 20951 GLDPYNVLAPK 11 1 0 Unmodified _GLDPYNVLAPK_ 0 0 0 P10606;Q6FHM4;Q6FHJ9 P10606 P10606 COX5B Cytochrome c oxidase subunit 5B, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.8344 2 593.826963 1185.63937 79906.47 0.9268 0.00055036 0.59155 0.00035128 1.5184 0.00090164 593.82736502016 597.834183555558 91.718 0.61893 91.718 91.382 92.001 0 180 50 5 0 0 0 0.00024958 2 55616 90.657 82.436 1 1.1323 1.2319 0 48358000 26459000 21899000 13417 1465 5107 5233 20952;20953 20953 GLDPYNVLAPK 11 1 0 Unmodified _GLDPYNVLAPK_ 0 0 0 P10606;Q6FHM4;Q6FHJ9 P10606 P10606 COX5B Cytochrome c oxidase subunit 5B, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.8347 2 593.826963 1185.63937 NaN NaN NaN 0.71747 0.00042605 NaN NaN NaN NaN 90.758 0.49863 90.758 90.538 91.037 0 0 0 0 0.0011039 1 56181 85.731 70.58 1 NaN NaN 0 43983000 0 43983000 13418 1465 5107 5233 20954 20954 GLDPYNVLAPK 11 1 0 Unmodified _GLDPYNVLAPK_ 0 0 0 P10606;Q6FHM4;Q6FHJ9 P10606 P10606 COX5B Cytochrome c oxidase subunit 5B, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.8276 2 593.826963 1185.63937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.772 1 90.772 90.272 91.272 -7.6294E-06 0 0 0 0.00022135 1 56153 79.906 49.652 1 13419 1465 5107 5233 20955 20955 GLDPYNVLAPK 11 1 0 Unmodified _GLDPYNVLAPK_ 0 0 0 P10606;Q6FHM4;Q6FHJ9 P10606 P10606 COX5B Cytochrome c oxidase subunit 5B, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.8339 2 593.826963 1185.63937 79778.59 0.57612 0.00034212 0.35604 0.00021142 0.93216 0.00055354 593.827351654663 597.83420426408 104.71 0.81728 104.71 104.38 105.2 0 191 47 6 0 0 0 0.037773 2 59536 36.381 36.381 1 1.0483 0.8212 0 3881800 1790700 2091200 13420 1465 5107 5233 20956;20957 20956 GLDPYNVLAPK 11 1 0 Unmodified _GLDPYNVLAPK_ 0 0 0 P10606;Q6FHM4;Q6FHJ9 P10606 P10606 COX5B Cytochrome c oxidase subunit 5B, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.8347 2 593.826963 1185.63937 79400.89 0.49007 0.00029102 0.29724 0.00017651 0.78731 0.00046753 593.827423404524 597.834171191881 104.59 0.75569 104.59 104.2 104.96 0 183 43 6 0 0 0 0.011607 1 58551 48.283 44.537 1 1.0758 0.85897 0 3079700 1488700 1591000 13421 1465 5107 5233 20958 20958 GLDSLFSYLQDK 12 1 0 Unmodified _GLDSLFSYLQDK_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3508 2 693.351 1384.68745 75340.68 0.69365 0.00048094 -0.11349 -7.8691E-05 0.58015 0.00040225 693.350736699322 697.358091049137 122.23 0.60922 122.23 121.92 122.53 7.6294E-06 219 43 8 0 0 0 1.2288E-22 2 79047 154.84 140.44 1 1.3475 1.4256 0 31178000 13800000 17378000 13422 503 5108 5234 20959;20960 20960 GLDSLFSYLQDK 12 1 0 Unmodified _GLDSLFSYLQDK_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.3508 2 693.351 1384.68745 73805.09 0.71423 0.00049521 -0.20042 -0.00013896 0.51381 0.00035625 693.350790820676 697.357941944048 121.74 0.57679 121.74 121.48 122.05 0 226 41 8 0 0 0 8.1029E-18 2 80585 141.95 131.8 1 1.3435 1.4164 0 35289000 15719000 19570000 13423 503 5108 5234 20961;20962 20962 GLDSLFSYLQDK 12 1 0 Unmodified _GLDSLFSYLQDK_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.3585 2 693.351 1384.68745 73771.73 1.1217 0.00077774 -0.019358 -1.3422E-05 1.1024 0.00076432 693.351058666661 697.358119972619 134.32 0.35893 134.32 134.14 134.5 1.5259E-05 76 15 8 0 0 0 0.00021114 1 81948 81.017 70.187 1 1.4687 1.1715 0 19983000 8304000 11679000 13424 503 5108 5234 20963 20963 GLDSLFSYLQDK 12 1 0 Unmodified _GLDSLFSYLQDK_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.3516 2 693.351 1384.68745 73707.88 1.114 0.00077243 -0.29772 -0.00020642 0.81633 0.000566 693.350790778895 697.357878653542 134.15 0.37546 134.15 133.96 134.34 0 94 18 7 0 0 0 1.5921E-12 2 80891 127.42 117.47 1 1.5072 1.2079 0 19757000 6859600 12897000 13425 503 5108 5234 20964;20965 20964 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 890.4881 2 889.985983 1777.95741 65449.49 0.71518 0.0006365 0.32391 0.00028827 1.0391 0.00092478 890.487509473431 893.993431760581 107.96 1.6233 107.96 107.46 109.08 0 668 116 10 0 0 0 1.1095E-24 4 67102 176.05 165.73 1 0.64774 0.73983 0 180440000 109420000 71014000 13426 106 5109 5235 20966;20967;20968;20969 20968 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.6601 3 593.659748 1777.95741 78747.7 0.81475 0.00048369 -0.14366 -8.5284E-05 0.6711 0.0003984 593.659647819031 596.331164679419 107.86 1.926 107.86 107.44 109.36 0 902 136 11 0 0 0 7.9525E-06 4 67592 85.619 85.619 1 0.69399 0.80233 0 226980000 127600000 99377000 13427 106 5109 5235 20970;20971;20972;20973 20972 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.9943 3 593.659748 1777.95741 79531.83 1.0514 0.00062416 -0.2741 -0.00016272 0.77728 0.00046144 593.659511522256 596.330865032421 131.36 1.1061 131.36 130.69 131.8 0 204 72 5 0 0 0 0.0055195 1 85479 29.733 26.071 1 0.74256 0.75685 0 10398000 5761300 4636300 13428 106 5109 5235 20974 20974 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.3318 3 593.659748 1777.95741 78314.27 0.84905 0.00050405 -0.46539 -0.00027628 0.38367 0.00022777 593.659453066384 596.331059543767 107.25 1.8864 107.25 106.8 108.69 0 795 131 11 0 0 0 2.6482E-05 4 68196 80.632 80.632 1 0.71937 0.84017 0 276740000 162890000 113860000 13429 106 5109 5235 20975;20976;20977;20978 20976 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 889.988 2 889.985983 1777.95741 65515.74 0.67902 0.00060432 0.11568 0.00010295 0.7947 0.00070727 889.986113752213 893.993234441871 107.24 1.7368 107.24 106.83 108.57 7.6294E-06 610 121 10 0 0 0 2.673E-17 3 68890 128.08 128.08 1 0.69711 0.80559 0 197210000 122780000 74431000 13430 106 5109 5235 20979;20980;20981 20981 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.6598 3 593.659748 1777.95741 79998.33 1.0779 0.00063988 -0.49218 -0.00029219 0.58568 0.0003477 593.659398040326 596.3307950197 131.43 1.499 131.43 130.79 132.29 0 380 110 6 0 0 0 4.6543E-05 3 87825 63.037 63.037 1 0.69937 0.70666 0 13181000 7179200 6001900 13431 106 5109 5235 20982;20983;20984 20982 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.6605 3 593.659748 1777.95741 NaN NaN NaN 0.095527 5.671E-05 NaN NaN NaN NaN 109.05 0.36192 109.05 108.9 109.26 0 0 0 0 0.020386 1 69927 30.575 26.332 1 NaN NaN 0 4157700 4157700 0 13432 106 5109 5235 20985 20985 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8187 3 593.659748 1777.95741 82360.31 -0.72306 -0.00042925 1.7879 0.0010614 1.0648 0.00063216 593.66062013069 596.665966021417 145.26 0.18733 145.26 145.24 145.43 0 27 6 8 0 0 0 0.045488 1 92757 26.781 23.177 1 0.51731 0.55328 0 36923000 23164000 13759000 13433 106 5109 5235 20986 20986 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.6655 3 593.659748 1777.95741 78137.34 0.70698 0.00041971 -0.14635 -8.6881E-05 0.56063 0.00033282 593.660011203251 596.331040149547 118.7 1.3262 118.7 118.24 119.56 0 442 59 13 0 0 0 4.7529E-05 3 70026 70.281 70.281 1 0.85737 0.7546 0 243330000 129260000 114070000 13434 106 5109 5235 20987;20988;20989 20987 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 893.994 2 889.985983 1777.95741 64556.34 0.6363 0.0005663 0.07207 6.4141E-05 0.70837 0.00063044 889.98630723772 893.993261194257 118.7 1.0245 118.7 118.48 119.5 0 336 47 12 0 0 0 1.2677E-33 2 70085 196.11 196.11 1 0.84415 0.73979 0 201950000 108190000 93756000 13435 106 5109 5235 20990;20991 20991 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 893.9942 2 889.985983 1777.95741 64789.97 0.42445 0.00037775 0.30083 0.00026774 0.72528 0.00064549 889.986592401603 893.993298591671 118.47 1.0269 118.47 118.2 119.23 0 347 46 11 0 0 0 2.0593E-10 2 68971 148.89 148.89 1 0.79132 0.68439 0 232090000 123420000 108670000 13436 106 5109 5235 20992;20993 20992 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.6658 3 593.659748 1777.95741 77778.7 0.76921 0.00045665 -0.17514 -0.00010397 0.59407 0.00035267 593.659902918884 596.331021636445 118.47 1.1241 118.47 118.04 119.17 0 377 51 13 0 0 0 1.1801E-06 1 68972 87.932 87.932 1 0.85241 0.73582 0 205270000 112140000 93133000 13437 106 5109 5235 20994 20994 GLDVEDVK 8 1 0 Unmodified _GLDVEDVK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2;Q59F66;Q92841 B4DN41;Q59F66 B4DN41 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.7365 2 437.729458 873.444362 90766.09 0.19607 8.5828E-05 -0.83199 -0.00036419 -0.63591 -0.00027836 437.728528024522 441.736063988818 43.659 0.74175 43.659 43.435 44.177 0 246 65 6 0 0 0 0.012282 2 23314 67.981 45.052 1 1.6105 1.8264 0 94526000 34960000 59566000 13438 1009;1801 5110 5236 20995;20996 20995 GLDVEDVK 8 1 0 Unmodified _GLDVEDVK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2;Q59F66;Q92841 B4DN41;Q59F66 B4DN41 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.7291 2 437.729458 873.444362 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.979 1 42.979 42.479 43.479 0 0 0 0 0.0048606 1 23261 87.754 56.175 1 13439 1009;1801 5110 5236 20997 20997 GLDVPQVSLIINYDLPNNR 19 0 1 Unmodified _GLDVPQVSLIINYDLPNNR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1075.578 2 1070.57349 2139.13242 59031.77 0.64485 0.00069036 0.18596 0.00019909 0.83082 0.00088945 1071.07479809219 1075.57781772745 126.78 0.46686 126.78 126.58 127.05 0 200 30 10 0 0 0 8.9505E-06 2 82427 74.769 74.769 1 2.0539 2.101 0 35413000 11649000 23764000 13440 261 5111 5237 20998;20999 20998 GLDVPQVSLIINYDLPNNR 19 0 1 Unmodified _GLDVPQVSLIINYDLPNNR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1070.5736 2 1070.57349 2139.13242 58777.1 0.6761 0.00072382 0.017065 1.827E-05 0.69317 0.00074209 1071.07528196105 1076.07911671479 126.46 0.57884 126.46 126.22 126.8 0 207 35 10 0 0 0 6.8369E-06 2 84279 77.776 77.776 1 1.8846 2.1442 0 49195000 16881000 32314000 13441 261 5111 5237 21000;21001 21001 GLDYLHSEK 9 1 0 Unmodified _GLDYLHSEK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;B4DMR0;H0Y630;B4DR80;Q6P0Y1;Q5U0E6;B4DT57;Q9Y6E0;Q6FG81 Q8NBY1 Q8NBY1 STK26;MST4;STK24;HEL-S-95 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2734 2 531.266739 1060.51892 NaN NaN NaN -0.379 -0.00020135 NaN NaN NaN NaN 32.981 0.34555 32.981 32.921 33.266 0 0 0 0 0.033076 1 16431 52.482 36.867 1 NaN NaN 0 6185800 0 6185800 13442 1065 5112 5238 21002 21002 GLDYLHSEK 9 1 0 Unmodified _GLDYLHSEK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;B4DMR0;H0Y630;B4DR80;Q6P0Y1;Q5U0E6;B4DT57;Q9Y6E0;Q6FG81 Q8NBY1 Q8NBY1 STK26;MST4;STK24;HEL-S-95 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.2737 2 531.266739 1060.51892 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.829 1 31.829 31.329 32.329 0 0 0 0 0.033576 1 15806 51.864 25.641 1 13443 1065 5112 5238 21003 21003 GLDYLHSEK 9 1 0 Unmodified _GLDYLHSEK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;B4DMR0;H0Y630;B4DR80;Q6P0Y1;Q5U0E6;B4DT57;Q9Y6E0;Q6FG81 Q8NBY1 Q8NBY1 STK26;MST4;STK24;HEL-S-95 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.2754 2 531.266739 1060.51892 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.88 1 31.88 31.38 32.38 1.9073E-06 0 0 0 0.031658 1 15842 52.482 31.927 1 13444 1065 5112 5238 21004 21004 GLEALLADPQQK 12 1 0 Unmodified _GLEALLADPQQK_ 0 0 0 Q9H8H0;J3QR28;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.8545 2 641.853709 1281.69287 76714.43 0.72779 0.00046714 0.1065 6.8358E-05 0.83429 0.0005355 641.853844101836 645.860670104883 87.638 0.59267 87.638 87.311 87.904 0 168 44 5 0 0 0 0.00018073 1 53957 74.841 51.522 1 0.7401 0.8275 0 107240000 57496000 49743000 13445 2042 5113 5239 21005 21005 GLECNFGASSTALK 14 1 0 Unmodified _GLECNFGASSTALK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.8564 2 727.850841 1453.68713 NaN NaN NaN 1.1057 0.00080475 NaN NaN NaN NaN 67.067 0.53455 67.067 66.84 67.375 0 0 0 0 1.6849E-09 3 39624 106.67 77.71 1 NaN NaN 0 61596000 0 61596000 13446 979 5114 5240 21006;21007;21008 21006 GLECNFGASSTALK 14 1 0 Unmodified _GLECNFGASSTALK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 731.8565 2 727.850841 1453.68713 60903.36 0.61275 0.00044599 -0.28088 -0.00020444 0.33187 0.00024155 727.850887568453 731.857017509814 78.378 0.66095 78.378 78.064 78.725 0 235 43 9 0 0 0 0.00010249 2 42018 84.821 62.482 1 1.437 1.1222 0 16077000 6648800 9428500 13447 979 5114 5240 21009;21010 21010 GLECNFGASSTALK 14 1 0 Unmodified _GLECNFGASSTALK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.8571 2 727.850841 1453.68713 65126.26 0.6173 0.0004493 -0.35718 -0.00025997 0.26012 0.00018933 727.850957989215 731.856705625363 78.665 0.69143 78.665 78.413 79.105 0 240 45 8 0 0 0 3.133E-06 2 41376 103.43 70.243 1 1.3677 1.0988 0 15993000 6104600 9888200 13448 979 5114 5240 21011;21012 21012 GLEDPSQVVR 10 0 1 Unmodified _GLEDPSQVVR_ 0 0 0 H0YN14;D3DS63;B3KTB3;B3KT38;B3KPS9;Q59FI4;Q8TEX9;B3KPY9;Q6I9Y8;B3KSQ4;Q59H62;B3KQ33 H0YN14 H0YN14 IPO4 Importin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.2946 2 550.290745 1098.56694 84057.77 0.20092 0.00011057 0.49496 0.00027237 0.69589 0.00038294 550.29080011403 555.294798003364 53.009 0.39178 53.009 52.824 53.216 0 71 30 4 0 0 0 0.0073232 1 29568 57.59 37.069 1 0.92352 0.93438 0 9718300 4549200 5169100 13449 923 5115 5241 21013 21013 GLEDPSQVVR 10 0 1 Unmodified _GLEDPSQVVR_ 0 0 0 H0YN14;D3DS63;B3KTB3;B3KT38;B3KPS9;Q59FI4;Q8TEX9;B3KPY9;Q6I9Y8;B3KSQ4;Q59H62;B3KQ33 H0YN14 H0YN14 IPO4 Importin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.2898 2 550.290745 1098.56694 82368.92 0.29698 0.00016342 0.41658 0.00022924 0.71355 0.00039266 550.29077828544 555.295273710667 51.748 0.44986 51.748 51.488 51.938 0 103 37 4 0 0 0 0.0026728 1 29352 68.016 48.922 1 1.2325 1.2192 0 12436000 5668400 6767200 13450 923 5115 5241 21014 21014 GLEEITVHNK 10 1 0 Unmodified _GLEEITVHNK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.3058 2 570.306395 1138.59824 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.513 1 32.513 32.013 33.013 0 0 0 0 0.0020738 1 16175 67.993 38.831 1 13451 1602 5116 5242 21015 21015 GLEGERPAR 9 0 2 Unmodified _GLEGERPAR_ 0 0 1 P46783;Q59GE4;F6U211;S4R435;Q14489 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.7727 2 492.764697 983.514842 83693.8 0.34389 0.00016946 0.022795 1.1232E-05 0.36669 0.00018069 492.764684121174 502.772954372588 16.08 0.76139 16.08 15.926 16.687 0 162 39 9 0 0 0 0.0086405 2 3486 83.265 23.867 1 1.1912 1.2987 0 119550000 51642000 67913000 13452 1573 5117 5243 21016;21017 21016 GLEGERPAR 9 0 2 Unmodified _GLEGERPAR_ 0 0 1 P46783;Q59GE4;F6U211;S4R435;Q14489 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 328.8454 3 328.845557 983.514842 103090.6 0.12944 4.2564E-05 0.089125 2.9308E-05 0.21856 7.1873E-05 328.845483692469 335.517771162362 16.091 0.50832 16.091 15.944 16.452 0 101 27 7 0 0 0 0.041014 1 3557 24.121 10.127 1 1.1716 1.2722 0 31155000 15630000 15525000 13453 1573 5117 5243 21018 21018 GLELDVVTIR 10 0 1 Unmodified _GLELDVVTIR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.8312 2 557.826963 1113.63937 NaN NaN NaN -0.041678 -2.3249E-05 NaN NaN NaN NaN 103.28 0.53367 103.28 103.07 103.61 -7.6294E-06 0 0 0 0.0037411 1 63676 75.378 41.582 1 NaN NaN 0 6900700 0 6900700 13454 1581 5118 5244 21019 21019 GLELDVVTIR 10 0 1 Unmodified _GLELDVVTIR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.8315 2 557.826963 1113.63937 NaN NaN NaN 0.44632 0.00024897 NaN NaN NaN NaN 102.71 0.5036 102.71 102.35 102.85 0 0 0 0 0.0033711 1 64729 76.827 42.019 1 NaN NaN 0 10781000 0 10781000 13455 1581 5118 5244 21020 21020 GLELLAASEAPRDPPGQAK 19 1 1 Unmodified _GLELLAASEAPRDPPGQAK_ 0 0 1 A0A024R1T1;Q86WX3;F8WFE7 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.067 3 640.67769 1919.01124 78492.8 0.87461 0.00056034 -0.26611 -0.00017049 0.6085 0.00038985 641.011733713222 646.68450632568 75.296 0.48609 75.296 75.049 75.535 0 172 39 6 0 0 0 0.00063206 1 44311 47.568 47.568 1 1.1046 1.2753 0 28271000 15486000 12785000 13456 87 5119 5245 21021 21021 GLELLAASEAPRDPPGQAK 19 1 1 Unmodified _GLELLAASEAPRDPPGQAK_ 0 0 1 A0A024R1T1;Q86WX3;F8WFE7 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 969.5254 2 960.512896 1919.01124 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.046 1 74.046 73.546 74.546 0 0 0 0 0.040023 1 44522 43.761 30.098 1 13457 87 5119 5245 21022 21022 GLELLAASEAPRDPPGQAK 19 1 1 Unmodified _GLELLAASEAPRDPPGQAK_ 0 0 1 A0A024R1T1;Q86WX3;F8WFE7 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.0198 3 640.67769 1919.01124 75573.46 0.56158 0.00035979 -0.50121 -0.00032111 0.060369 3.8677E-05 640.678002098671 646.684703771564 86.001 0.63963 86.001 85.723 86.362 0 184 44 6 0 0 0 0.00022847 2 47061 38.777 38.777 1 1.247 1.0506 0 7479700 3535800 3943800 13458 87 5119 5245 21023;21024 21023 GLELLAASEAPRDPPGQAK 19 1 1 Unmodified _GLELLAASEAPRDPPGQAK_ 0 0 1 A0A024R1T1;Q86WX3;F8WFE7 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.6856 3 640.67769 1919.01124 75279.02 0.61817 0.00039605 -0.07123 -4.5636E-05 0.54694 0.00035041 640.67795592372 646.684989641024 85.987 0.56493 85.987 85.759 86.324 0 101 30 4 0 0 0 1.1993E-05 2 46331 52.784 43.379 1 1.3584 1.1443 0 8115200 3221200 4894000 13459 87 5119 5245 21025;21026 21025 GLENPLPERPR 11 0 2 Unmodified _GLENPLPERPR_ 0 0 1 P53350;B2R841;B4E083;Q59GD0;D3DWF3 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.2433 3 426.570204 1276.68878 92619.75 0.45306 0.00019326 -1.0568 -0.0004508 -0.60375 -0.00025754 426.570130778967 433.241729419049 43.983 0.7422 43.983 43.722 44.464 0 304 65 8 0 0 0 0.0008324 1 23896 61.344 43.908 1 0.82878 0.95883 0 72615000 39484000 33132000 13460 1604 5120 5246 21027 21027 GLESLPPLRPQQNPVLPVAGER 22 0 2 Unmodified _GLESLPPLRPQQNPVLPVAGER_ 0 0 1 A8K492;P56192;B4DF61;B4E0E9;A0A024RBA2 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.7827 3 789.776286 2366.30703 68637.13 0.69907 0.00055211 0.0083283 6.5775E-06 0.7074 0.00055869 790.110810486018 796.448396744746 104.16 0.82033 104.16 103.8 104.62 0 310 68 7 0 0 0 1.9504E-05 1 64303 42.711 42.711 1 3.0101 3.2687 0 31685000 8275500 23410000 13461 732 5121 5247 21028 21028 GLESLPPLRPQQNPVLPVAGER 22 0 2 Unmodified _GLESLPPLRPQQNPVLPVAGER_ 0 0 1 A8K492;P56192;B4DF61;B4E0E9;A0A024RBA2 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.7838 3 789.776286 2366.30703 69534.79 0.81301 0.00064209 0.0344 2.7168E-05 0.84741 0.00066926 790.110702935724 796.782799121697 103.34 0.69115 103.34 102.96 103.65 0 214 55 6 0 0 0 4.6583E-09 1 65353 79.635 79.635 1 3.1287 3.5783 0 46415000 13730000 32685000 13462 732 5121 5247 21029 21029 GLESLPPLRPQQNPVLPVAGER 22 0 2 Unmodified _GLESLPPLRPQQNPVLPVAGER_ 0 0 1 A8K492;P56192;B4DF61;B4E0E9;A0A024RBA2 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 796.4491 3 789.776286 2366.30703 68907.12 0.90876 0.00071772 -0.18111 -0.00014304 0.72765 0.00057468 790.110221622585 796.782544459568 115.19 0.4593 115.19 114.99 115.45 0 116 20 8 0 0 0 3.3023E-05 2 67357 37.884 37.884 1 1.1852 1.0115 0 6694400 3352900 3341600 13463 732 5121 5247 21030;21031 21030 GLESLPPLRPQQNPVLPVAGER 22 0 2 Unmodified _GLESLPPLRPQQNPVLPVAGER_ 0 0 1 A8K492;P56192;B4DF61;B4E0E9;A0A024RBA2 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 796.45 3 789.776286 2366.30703 69867.74 0.78053 0.00061644 -0.0061114 -4.8266E-06 0.77442 0.00061162 790.110295149045 796.782782347354 114.99 0.39377 114.99 114.81 115.2 0 114 18 8 0 0 0 2.3852E-06 2 66356 48.824 48.824 1 1.3455 1.2225 0 6227200 3169000 3058300 13464 732 5121 5247 21032;21033 21032 GLEVTDDSPK 10 1 0 Unmodified _GLEVTDDSPK_ 0 0 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.7689 2 530.761486 1059.50842 NaN NaN NaN -1.0173 -0.00053994 NaN NaN NaN NaN 33.666 0.24009 33.666 33.494 33.734 0 0 0 0 0.0038582 1 16718 74.92 55.443 1 NaN NaN 0 4838200 0 4838200 13465 1583 5122 5248 21034 21034 GLEVTDDSPK 10 1 0 Unmodified _GLEVTDDSPK_ 0 0 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.7687 2 530.761486 1059.50842 NaN NaN NaN -1.2426 -0.00065955 NaN NaN NaN NaN 33.324 0.42735 33.324 33.128 33.555 0 0 0 0 0.0025181 1 16669 80.165 51.653 1 NaN NaN 0 6918900 0 6918900 13466 1583 5122 5248 21035 21035 GLEWVANIK 9 1 0 Unmodified _GLEWVANIK_ 0 0 0 Q9ULB6;A0A0F7TD49;Q0ZCH7;Q0ZCH4;Q0ZCG0;Q0ZCF9;Q0ZCJ4;Q0ZCJ5;Q0ZCH9;Q0ZCJ2;Q0ZCI8;Q0ZCJ0;A0A0X9USM3;V9HW68;P01780 Q9ULB6 Q9ULB6 VH;HEL-214 Ig heavy chain V-III region JON MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.2905 2 515.290017 1028.56548 84368.45 0.48409 0.00024945 -0.27077 -0.00013952 0.21332 0.00010992 515.289898412522 519.296792874158 46.879 0.67443 46.879 46.367 47.041 0 259 54 8 0 0 0 0.0061036 2 25161 65.038 17.971 1 0.62299 0.73205 0 310640000 196090000 114550000 13467 532 5123 5249 21036;21037 21036 GLEWVANIK 9 1 0 Unmodified _GLEWVANIK_ 0 0 0 Q9ULB6;A0A0F7TD49;Q0ZCH7;Q0ZCH4;Q0ZCG0;Q0ZCF9;Q0ZCJ4;Q0ZCJ5;Q0ZCH9;Q0ZCJ2;Q0ZCI8;Q0ZCJ0;A0A0X9USM3;V9HW68;P01780 Q9ULB6 Q9ULB6 VH;HEL-214 Ig heavy chain V-III region JON MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.2901 2 515.290017 1028.56548 84240.01 0.17813 9.179E-05 0.22984 0.00011843 0.40797 0.00021022 515.290097349376 519.2971601095 47.047 0.56787 47.047 46.962 47.53 0 225 52 7 0 0 0 0.033971 1 25645 44.447 7.4264 1 0.54435 0.6229 0 186870000 116460000 70409000 13468 532 5123 5249 21038 21038 GLEWVANIK 9 1 0 Unmodified _GLEWVANIK_ 0 0 0 Q9ULB6;A0A0F7TD49;Q0ZCH7;Q0ZCH4;Q0ZCG0;Q0ZCF9;Q0ZCJ4;Q0ZCJ5;Q0ZCH9;Q0ZCJ2;Q0ZCI8;Q0ZCJ0;A0A0X9USM3;V9HW68;P01780 Q9ULB6 Q9ULB6 VH;HEL-214 Ig heavy chain V-III region JON MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.2902 2 515.290017 1028.56548 83606.55 0.54282 0.00027971 -0.22065 -0.0001137 0.32217 0.00016601 515.289926669116 519.296780325173 45.514 1.0333 45.514 44.966 45.999 3.8147E-06 493 91 8 0 0 0 0.014435 1 24784 55.676 15.573 1 0.57698 0.67925 0 439920000 263390000 176540000 13469 532 5123 5249 21039 21039 GLEWVANIK 9 1 0 Unmodified _GLEWVANIK_ 0 0 0 Q9ULB6;A0A0F7TD49;Q0ZCH7;Q0ZCH4;Q0ZCG0;Q0ZCF9;Q0ZCJ4;Q0ZCJ5;Q0ZCH9;Q0ZCJ2;Q0ZCI8;Q0ZCJ0;A0A0X9USM3;V9HW68;P01780 Q9ULB6 Q9ULB6 VH;HEL-214 Ig heavy chain V-III region JON MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.29 2 515.290017 1028.56548 83435.91 0.16744 8.6282E-05 -0.17188 -8.8566E-05 -0.0044315 -2.2835E-06 515.289952020005 519.297039118366 53.225 1.4022 53.225 52.654 54.056 0 457 100 8 0 0 0 0.037915 1 25946 42.869 12.257 1 0.82437 0.66101 0 19186000 10902000 8284100 13470 532 5123 5249 21040 21040 GLFIIDDK 8 1 0 Unmodified _GLFIIDDK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5;H7C3T4;V9HW63;Q13162 Q06830 Q06830 PRDX1;PRDX4;HEL-S-97n Peroxiredoxin-1;Peroxiredoxin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.7654 2 460.758018 919.501483 89257.58 0.50193 0.00023127 0.044758 2.0622E-05 0.54669 0.00025189 460.75797531641 464.765043700874 91.679 1.1435 91.679 91.13 92.274 0 401 98 6 0 0 0 0.012282 2 55245 67.981 17.854 1 2.8579 3.2272 0 80881000 20400000 60481000 13471 1690 5124 5250 21041;21042 21041 GLFIIDDK 8 1 0 Unmodified _GLFIIDDK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5;H7C3T4;V9HW63;Q13162 Q06830 Q06830 PRDX1;PRDX4;HEL-S-97n Peroxiredoxin-1;Peroxiredoxin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.7664 2 460.758018 919.501483 90023.15 0.74211 0.00034193 0.056481 2.6024E-05 0.79859 0.00036796 460.758010362326 464.76503609929 90.69 1.3136 90.69 90.134 91.448 0 423 112 7 0 0 0 0.012282 2 56338 67.981 17.854 1 2.9536 3.3701 0 153600000 42876000 110720000 13472 1690 5124 5250 21043;21044 21044 GLFIIDPNGVIK 12 1 0 Unmodified _GLFIIDPNGVIK_ 0 0 0 Q53HC2;P30048 Q53HC2 Q53HC2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.3867 2 643.379363 1284.74417 75029.35 0.74941 0.00048215 0.69062 0.00044433 1.44 0.00092648 643.37990953758 647.386654093195 118.84 0.49021 118.84 118.52 119.01 0 99 27 6 0 0 0 0.0002174 2 76206 82.287 82.287 1 3.1105 3.1899 0 13022000 3569800 9451900 13473 1530 5125 5251 21045;21046 21045 GLFIIDPNGVIK 12 1 0 Unmodified _GLFIIDPNGVIK_ 0 0 0 Q53HC2;P30048 Q53HC2 Q53HC2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.3804 2 643.379363 1284.74417 76304.69 1.0035 0.00064565 0.55452 0.00035677 1.5581 0.0010024 643.379615434124 647.386210076579 130.49 0.38708 130.49 130.3 130.68 0 54 15 5 0 0 0 0.012214 1 78236 45.161 45.161 1 1.6612 1.4188 0 1424300 615880 808420 13474 1530 5125 5251 21047 21047 GLFSANDWQCK 11 1 0 Unmodified _GLFSANDWQCK_ 0 0 0 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3072 2 663.300787 1324.58702 NaN NaN NaN 0.74246 0.00049248 NaN NaN NaN NaN 78.316 0.32374 78.316 78.157 78.481 0 0 0 0 0.050218 1 47430 44.203 27.571 1 NaN NaN 0 2932000 0 2932000 13475 1420 5126 5252 21048 21048 GLFTGLTPR 9 0 1 Unmodified _GLFTGLTPR_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.277 2 481.276909 960.539266 86699.54 0.15674 7.5437E-05 -0.037527 -1.8061E-05 0.11922 5.7376E-05 481.276869168851 486.280753203422 85.91 0.60529 85.91 85.519 86.125 0 232 52 6 0 0 0 0.0010726 2 51587 90.37 51.066 1 1.3738 1.4584 0 42231000 19122000 23109000 13476 2152 5127 5253 21049;21050 21050 GLFTGLTPR 9 0 1 Unmodified _GLFTGLTPR_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.2775 2 481.276909 960.539266 86679.1 0.21225 0.00010215 -0.48188 -0.00023192 -0.26963 -0.00012977 481.276837456853 486.280657597661 84.729 0.58887 84.729 84.439 85.027 0 241 49 8 0 0 0 0.0039394 2 52002 70.525 40.718 1 1.3976 1.5961 0 91308000 37975000 53333000 13477 2152 5127 5253 21051;21052 21052 GLFTLFAGHLVK 12 1 0 Unmodified _GLFTLFAGHLVK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8824 2 651.882073 1301.74959 76325.66 0.68531 0.00044674 0.15772 0.00010281 0.84303 0.00054956 651.882014823902 655.888852006641 114.33 0.95245 114.33 113.89 114.84 0 240 68 5 0 0 0 1.9678E-05 2 72544 103.55 103.55 1 0.87356 0.9231 0 16291000 8396800 7894200 13478 897 5128 5254 21053;21054 21053 GLFTLFAGHLVK 12 1 0 Unmodified _GLFTLFAGHLVK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8823 2 651.882073 1301.74959 75971.8 0.80678 0.00052592 -0.03738 -2.4367E-05 0.7694 0.00050156 651.881926261647 655.889000818965 113.15 0.86914 113.15 112.68 113.55 0 271 59 6 0 0 0 0.00018337 2 73094 75.378 75.378 1 0.92599 0.93369 0 28111000 15244000 12867000 13479 897 5128 5254 21055;21056 21056 GLFTLFAGHLVK 12 1 0 Unmodified _GLFTLFAGHLVK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.8826 2 651.882073 1301.74959 76584.38 0.92539 0.00060325 0.12306 8.0218E-05 1.0484 0.00068346 651.882208971003 655.889062322175 124.06 0.50798 124.06 123.83 124.34 0 102 20 7 0 0 0 0.00075442 2 74257 66.299 66.299 1 1.1067 0.87457 0 5191400 2500000 2691400 13480 897 5128 5254 21057;21058 21058 GLFTLFAGHLVK 12 1 0 Unmodified _GLFTLFAGHLVK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.8909 2 651.882073 1301.74959 75787.34 0.80808 0.00052677 0.63369 0.00041309 1.4418 0.00093986 651.882528099019 655.889428905983 123.75 0.48626 123.75 123.54 124.03 0 99 18 7 0 0 0 0.0048325 2 73143 52.49 52.49 1 1.1445 0.93413 0 7965800 3591500 4374300 13481 897 5128 5254 21059;21060 21060 GLFYFDNSFRPVPLEQTYVGITEK 24 1 1 Unmodified _GLFYFDNSFRPVPLEQTYVGITEK_ 0 0 1 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 941.1475 3 940.812954 2819.41703 63930.72 0.71228 0.00067012 0.10551 9.9262E-05 0.81779 0.00076938 941.14752287287 947.153820416771 124.8 0.72743 124.8 124.47 125.19 0 199 49 7 0 0 0 0.029006 1 80958 18.497 18.497 1 0.8122 0.87583 0 11049000 6099900 4949200 13482 1411 5129 5255 21061 21061 GLFYFDNSFRPVPLEQTYVGITEK 24 1 1 Unmodified _GLFYFDNSFRPVPLEQTYVGITEK_ 0 0 1 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 941.147 3 940.812954 2819.41703 NaN NaN NaN -0.1271 -0.00011958 NaN NaN NaN NaN 124.18 0.36103 124.18 123.9 124.26 0 0 0 0 0.0030417 1 82492 37.896 31.736 1 NaN NaN 0 7973100 7973100 0 13483 1411 5129 5255 21062 21062 GLGAGAGAGEESPATSLPR 19 0 1 Unmodified _GLGAGAGAGEESPATSLPR_ 0 0 0 O15173 O15173 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.9277 2 849.42629 1696.83803 NaN NaN NaN -0.42176 -0.00035825 NaN NaN NaN NaN 64.352 0.332 64.352 64.231 64.563 0 0 0 0 4.6451E-06 1 36995 69.03 55.83 1 NaN NaN 0 3935600 3935600 0 13484 1377 5130 5256 21063 21063 GLGAGAGAGEESPATSLPR 19 0 1 Unmodified _GLGAGAGAGEESPATSLPR_ 0 0 0 O15173 O15173 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 854.4302 2 849.42629 1696.83803 65824.34 0.62317 0.00052934 -0.47361 -0.0004023 0.14957 0.00012705 849.425529045828 854.931843997219 63.187 0.37432 63.187 62.966 63.341 3.8147E-06 100 30 5 0 0 0 1.0499E-05 2 37156 72.891 63.459 1 0.88919 0.88403 0 7249700 3637300 3612500 13485 1377 5130 5256 21064;21065 21065 GLGAGAGAGEESPATSLPR 19 0 1 Unmodified _GLGAGAGAGEESPATSLPR_ 0 0 0 O15173 O15173 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.427 2 849.42629 1696.83803 69676.14 0.77105 0.00065495 -0.40258 -0.00034196 0.36847 0.00031299 849.425826834686 854.431132678981 74.177 0.46439 74.177 73.946 74.41 7.6294E-06 79 30 5 0 0 0 0.027524 1 39322 23.008 16.767 1 0.39183 0.34863 0 885840 627360 258470 13486 1377 5130 5256 21066 21066 GLGAQEQGATDHIK 14 1 0 Unmodified _GLGAQEQGATDHIK_ 0 0 0 Q96BK5;E5RJG9;E5RGR1;A0A0A6YYK5 Q96BK5 Q96BK5 PINX1 PIN2/TERF1-interacting telomerase inhibitor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.8641 2 712.860054 1423.70556 70315.52 0.89836 0.0006404 1.6772 0.0011956 2.5756 0.001836 712.86184411236 716.868007678853 25.079 0.15761 25.079 25.029 25.187 0 14 6 4 0 0 0 1.0458E-09 1 10763 121.5 110.75 1 0.65038 0.65335 0 7428100 4498700 2929500 13487 1960 5131 5257 21067 21067 GLGAQEQGATDHIK 14 1 0 Unmodified _GLGAQEQGATDHIK_ 0 0 0 Q96BK5;E5RJG9;E5RGR1;A0A0A6YYK5 Q96BK5 Q96BK5 PINX1 PIN2/TERF1-interacting telomerase inhibitor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.8606 2 712.860054 1423.70556 NaN NaN NaN 0.63284 0.00045113 NaN NaN NaN NaN 24.893 0.14528 24.893 24.792 24.938 0 0 0 0 1.4395E-31 1 10578 152.67 120.74 1 NaN NaN 0 6902500 6902500 0 13488 1960 5131 5257 21068 21068 GLGATFILR 9 0 1 Unmodified _GLGATFILR_ 0 0 0 S4R3W9;A0A0A0MRF4;B4DIG4;A8K5D5;P49406 S4R3W9 S4R3W9 MRPL19 39S ribosomal protein L19, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.2872 2 474.287277 946.560001 88572.65 0.42605 0.00020207 -0.096143 -4.5599E-05 0.32991 0.00015647 474.287100100339 479.291411288813 94.034 0.60247 94.034 93.801 94.403 0 134 54 4 0 0 0 0.0019822 1 57052 78.324 35.849 1 1.4451 1.4691 0 14963000 6945700 8017500 13489 465 5132 5258 21069 21069 GLGATFILR 9 0 1 Unmodified _GLGATFILR_ 0 0 0 S4R3W9;A0A0A0MRF4;B4DIG4;A8K5D5;P49406 S4R3W9 S4R3W9 MRPL19 39S ribosomal protein L19, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.2873 2 474.287277 946.560001 NaN NaN NaN -0.3058 -0.00014504 NaN NaN NaN NaN 93.026 0.46944 93.026 92.799 93.268 0 0 0 0 0.0025762 1 57638 80.229 45.337 1 NaN NaN 0 7181400 7181400 0 13490 465 5132 5258 21070 21070 GLGATTHPTAAVK 13 1 0 Unmodified _GLGATTHPTAAVK_ 0 0 0 Q68E10;E9PB90;A8K2U2;P52789;Q53SG7 Q68E10 Q68E10 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.35 2 612.340769 1222.66699 78590.43 0.57859 0.00035429 -0.11807 -7.2302E-05 0.46052 0.00028199 612.840818939104 616.347808864575 24.806 0.24292 24.806 24.695 24.938 0 30 10 5 0 0 0 9.2833E-09 1 10489 115.82 80.553 1 8.3391 8.4868 0 12445000 1704000 10741000 13491 714 5133 5259 21071 21071 GLGGIMVK 8 1 0 Oxidation (M) _GLGGIM(ox)VK_ GLGGIM(1)VK GLGGIM(41.3)VK 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2384 2 395.728206 789.44186 NaN NaN NaN 0.57124 0.00022606 NaN NaN NaN NaN 43.784 0.72402 43.784 43.453 44.177 0 0 0 0 0.024565 1 24037 41.302 25.534 1 NaN NaN 0 24108000 0 24108000 13492 168 5134 5260 21072 21072 143 GLGILSLK 8 1 0 Unmodified _GLGILSLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 404.7723 2 400.765646 799.516739 NaN NaN NaN 0.14475 5.8011E-05 NaN NaN NaN NaN 92.569 0.48459 92.569 92.406 92.891 0 0 0 0 0.030565 1 56054 58.917 8.7907 1 NaN NaN 0 5728200 0 5728200 13493 1205 5135 5261 21073 21073 GLGILSLK 8 1 0 Unmodified _GLGILSLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 404.7727 2 400.765646 799.516739 96462.44 0.44675 0.00017904 -0.30664 -0.00012289 0.1401 5.6149E-05 400.765296109545 404.77264591232 91.671 0.48566 91.671 91.327 91.813 0 93 41 4 0 0 0 0.024726 2 56594 55.676 9.2503 1 1.8247 1.8215 0 14248000 4685900 9561800 13494 1205 5135 5261 21074;21075 21074 GLGLDDALEPR 11 0 1 Unmodified _GLGLDDALEPR_ 0 0 0 Q9Y230;B4DW30;X6R2L4;M0R0Z0 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.3044 2 578.303852 1154.59315 79604.53 0.70584 0.00040819 -0.070189 -4.0591E-05 0.63566 0.0003676 578.303581508739 583.308110974858 84.781 0.69724 84.781 84.58 85.277 0 304 57 8 0 0 0 2.3128E-05 2 50799 103.7 89.034 1 0.81706 0.93492 0 128950000 68345000 60603000 13495 2120 5136 5262 21076;21077 21077 GLGLDDALEPR 11 0 1 Unmodified _GLGLDDALEPR_ 0 0 0 Q9Y230;B4DW30;X6R2L4;M0R0Z0 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.3082 2 578.303852 1154.59315 79177.78 1.0057 0.00058159 0.013663 7.9011E-06 1.0193 0.00058949 578.303788392298 583.308074822799 83.906 0.73822 83.906 83.605 84.343 0 303 61 8 0 0 0 8.7899E-06 2 51363 109.29 109.29 1 0.77775 0.89362 0 195820000 110290000 85539000 13496 2120 5136 5262 21078;21079 21079 GLGLDDALEPR 11 0 1 Unmodified _GLGLDDALEPR_ 0 0 0 Q9Y230;B4DW30;X6R2L4;M0R0Z0 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.3085 2 578.303852 1154.59315 80731.91 0.80291 0.00046433 -0.063303 -3.6608E-05 0.73961 0.00042772 578.303737526796 583.307924858326 96.758 0.74881 96.758 96.454 97.203 7.6294E-06 216 40 8 0 0 0 0.0023522 2 54190 61.78 61.78 1 1.2535 1.0253 0 13580000 6298900 7280700 13497 2120 5136 5262 21080;21081 21080 GLGLDDALEPR 11 0 1 Unmodified _GLGLDDALEPR_ 0 0 0 Q9Y230;B4DW30;X6R2L4;M0R0Z0 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.3033 2 578.303852 1154.59315 79715.04 0.29895 0.00017288 0.007512 4.3442E-06 0.30646 0.00017723 578.303831233639 583.307990320893 96.643 0.77109 96.643 96.344 97.115 0 217 38 8 0 0 0 0.00036511 3 53362 84.213 75.68 1 1.2457 1.019 0 13226000 6108200 7117600 13498 2120 5136 5262 21082;21083;21084 21084 GLGLDESGLAK 11 1 0 Unmodified _GLGLDESGLAK_ 0 0 0 B5BUB1;Q9Y265 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2868 2 530.287671 1058.56079 81791.76 0.48399 0.00025666 0.091769 4.8664E-05 0.57576 0.00030532 530.287214941591 534.294653451314 66.063 0.72073 66.063 65.52 66.24 0 355 66 8 0 0 0 0.0018904 2 37902 64.04 44.254 1 0.87717 0.98878 0 128280000 71290000 56989000 13499 1076 5137 5263 21085;21086 21085 GLGLDESGLAK 11 1 0 Unmodified _GLGLDESGLAK_ 0 0 0 B5BUB1;Q9Y265 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.2865 2 530.287671 1058.56079 83625.27 0.32528 0.00017249 -0.027725 -1.4702E-05 0.29756 0.00015779 530.287209012213 534.294517033174 64.865 0.84636 64.865 64.237 65.084 0 246 74 8 0 0 0 0.00043772 2 38119 78.516 58.73 1 0.86293 0.99978 0 212270000 114090000 98172000 13500 1076 5137 5263 21087;21088 21087 GLGLDESGLAK 11 1 0 Unmodified _GLGLDESGLAK_ 0 0 0 B5BUB1;Q9Y265 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.2881 2 530.287671 1058.56079 82141.78 0.4323 0.00022924 0.89674 0.00047553 1.329 0.00070477 530.287475964725 534.294609367512 75.6 0.96844 75.6 75.158 76.127 0 369 68 9 0 0 0 0.0064337 2 40084 54.416 37.64 1 1.271 0.9856 0 13875000 6016600 7858400 13501 1076 5137 5263 21089;21090 21089 GLGLDESGLAK 11 1 0 Unmodified _GLGLDESGLAK_ 0 0 0 B5BUB1;Q9Y265 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 534.2947 2 530.287671 1058.56079 82652.05 0.31417 0.0001666 0.98497 0.00052232 1.2991 0.00068892 530.287539070851 534.294656547412 75.941 0.84888 75.941 75.542 76.391 0 348 56 10 0 0 0 0.0061204 3 39578 54.982 30.411 1 1.2439 1.0195 0 12468000 5399200 7069100 13502 1076 5137 5263 21091;21092;21093 21093 GLGLSPDLVVCR 12 0 1 Unmodified _GLGLSPDLVVCR_ 0 0 0 P17812;B4E1E0;B4DMB5;B7Z9C4 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.8571 2 643.35028 1284.68601 NaN NaN NaN -0.63395 -0.00040785 NaN NaN NaN NaN 99.983 1.0334 99.983 99.733 100.77 0 0 0 0 2.5428E-05 2 61221 100.02 70.207 1 NaN NaN 0 16553000 0 16553000 13503 1494 5138 5264 21094;21095 21095 GLGLSPDLVVCR 12 0 1 Unmodified _GLGLSPDLVVCR_ 0 0 0 P17812;B4E1E0;B4DMB5;B7Z9C4 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.851 2 643.35028 1284.68601 NaN NaN NaN -1.1968 -0.00076994 NaN NaN NaN NaN 112.4 0.44508 112.4 112.17 112.62 0 0 0 0 0.042471 1 64403 38.567 30.035 1 NaN NaN 0 1972200 1972200 0 13504 1494 5138 5264 21096 21096 GLGQLIR 7 0 1 Unmodified _GLGQLIR_ 0 0 0 Q5UIP0;H7C2B5 Q5UIP0 Q5UIP0 RIF1 Telomere-associated protein RIF1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 383.7443 2 378.739963 755.465373 NaN NaN NaN -0.19027 -7.2062E-05 NaN NaN NaN NaN 59.632 0.050674 59.632 59.589 59.639 3.8147E-06 0 0 0 0.051768 1 34717 57.453 8.2419 1 NaN NaN 0 2088500 0 2088500 13505 1829 5139 5265 21097 21097 GLGSGLQPWCPLDLR 15 0 1 Unmodified _GLGSGLQPWCPLDLR_ 0 0 0 P42695;G3V1A9;E9PKK4;E9PJ63;E9PL84;E9PJM8;E9PR72;E9PL95 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 839.9349 2 834.929957 1667.84536 65105.5 0.88286 0.00073712 0.45189 0.0003773 1.3348 0.0011144 835.432074015314 839.935235607936 128.41 0.8909 128.41 128.13 129.03 0 153 35 10 0 0 0 0.00025347 1 76645 61.435 51.383 1 1.7015 1.3843 0 9784200 3854700 5929500 13506 1565 5140 5266 21098 21098 GLGTDEDSLIEIICSR 16 0 1 Unmodified _GLGTDEDSLIEIICSR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1;H0YN52;H0YLE2 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.4428 2 889.435466 1776.85638 66327.87 0.70329 0.00062553 -0.37731 -0.00033559 0.32598 0.00028994 889.434326370425 894.439541017582 120.95 0.42958 120.95 120.76 121.19 0 123 29 6 0 0 0 0.00032707 2 78040 53.967 44.123 1 1.052 1.1037 0 11065000 4857000 6207700 13507 193 5141 5267 21099;21100 21100 GLGTDEDSLIEIICSR 16 0 1 Unmodified _GLGTDEDSLIEIICSR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1;H0YN52;H0YLE2 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.4405 2 889.435466 1776.85638 64148.97 0.86277 0.00076738 -0.59195 -0.00052651 0.27082 0.00024087 889.435118018561 894.4392188118 120.51 0.44704 120.51 120.32 120.77 -7.6294E-06 127 32 6 0 0 0 0.00015449 1 79568 70.412 51.787 1 1.1259 1.1341 0 10700000 4826600 5873300 13508 193 5141 5267 21101 21101 GLGTDEDSLIEIICSR 16 0 1 Unmodified _GLGTDEDSLIEIICSR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1;H0YN52;H0YLE2 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 889.9371 2 889.435466 1776.85638 66891.84 0.6458 0.0005744 -0.08178 -7.2738E-05 0.56402 0.00050166 889.936866951579 894.440006482852 133.59 0.548 133.59 133.34 133.88 0 75 22 5 0 0 0 0.00037519 1 81357 51.726 38.298 1 0.48947 0.42445 0 2083500 1414100 669350 13509 193 5141 5267 21102 21102 GLGTDEDSLIEIICSR 16 0 1 Unmodified _GLGTDEDSLIEIICSR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1;H0YN52;H0YLE2 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 889.4374 2 889.435466 1776.85638 66488.7 0.72108 0.00064135 0.72685 0.00064649 1.4479 0.0012878 889.936839690467 894.941890442499 133.34 0.35034 133.34 133.15 133.5 0 62 12 7 0 0 0 0.0032091 1 80307 37.594 23.688 1 0.52531 0.4565 0 2641800 1660300 981560 13510 193 5141 5267 21103 21103 GLGTDEESILTLLTSR 16 0 1 Unmodified _GLGTDEESILTLLTSR_ 0 0 0 V9HWE0;P08758;B4DNG6;E9PHT9 V9HWE0 V9HWE0 HEL-S-7;ANXA5 Annexin;Annexin A5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.9617 2 852.954349 1703.89414 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.15 1 130.15 129.65 130.65 1.5259E-05 0 0 0 0.00087574 1 84856 62.924 53.735 1 13511 1459 5142 5268 21104 21104 GLGTGQGAVSGPPR 14 0 1 Unmodified _GLGTGQGAVSGPPR_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24;G9G6R5 A0A024R570 A0A024R570 MEN1 Menin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.3378 2 627.333476 1252.6524 74825.99 0.47674 0.00029908 0.68555 0.00043007 1.1623 0.00072914 627.334217051679 632.338113513408 35.324 0.42033 35.324 35.11 35.531 0 134 36 6 0 0 0 0.00018442 4 17712 91.095 58.534 1 0.62904 0.63358 0 17494000 11528000 5966200 13512 171 5143 5269 21105;21106;21107;21108 21106 GLGTGQGAVSGPPR 14 0 1 Unmodified _GLGTGQGAVSGPPR_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24;G9G6R5 A0A024R570 A0A024R570 MEN1 Menin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3347 2 627.333476 1252.6524 NaN NaN NaN 0.45201 0.00028356 NaN NaN NaN NaN 34.607 0.31115 34.607 34.53 34.841 0 0 0 0 0.0001804 1 17508 86.014 57.056 1 NaN NaN 0 7158000 7158000 0 13513 171 5143 5269 21109 21109 GLGTGQGAVSGPPR 14 0 1 Unmodified _GLGTGQGAVSGPPR_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24;G9G6R5 A0A024R570 A0A024R570 MEN1 Menin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3381 2 627.333476 1252.6524 75630.89 0.36379 0.00022822 -0.22681 -0.00014229 0.13698 8.5935E-05 627.33420171106 632.337702718747 40.415 0.57502 40.415 40.049 40.624 0 157 43 6 0 0 0 4.0953E-05 2 18609 94.465 76.413 1 1.3706 1.1723 0 5901600 2855100 3046500 13514 171 5143 5269 21110;21111 21110 GLGTGQGAVSGPPR 14 0 1 Unmodified _GLGTGQGAVSGPPR_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24;G9G6R5 A0A024R570 A0A024R570 MEN1 Menin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.3381 2 627.333476 1252.6524 77549.16 0.35044 0.00021984 0.035549 2.2301E-05 0.38599 0.00024214 627.333630939964 632.337566044073 40.592 0.50635 40.592 40.37 40.876 3.8147E-06 172 40 5 0 0 0 0.00079617 1 18123 58.274 51.671 1 1.3049 1.0933 0 4886200 1995600 2890600 13515 171 5143 5269 21112 21112 GLGTGTLYIAESR 13 0 1 Unmodified _GLGTGTLYIAESR_ 0 0 0 E9PJF4;P54105;E9PMI6;J3KN38 E9PJF4 E9PJF4 CLNS1A Methylosome subunit pICln MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.8589 2 669.356616 1336.69868 70445.39 0.71122 0.00047606 0.36914 0.00024709 1.0804 0.00072315 669.356471251149 674.361252077473 79.299 0.46876 79.299 79.188 79.657 0 169 38 6 0 0 0 0.00079839 1 48140 60.434 38.348 1 1.9844 2.1725 0 32732000 10957000 21775000 13516 1241 5144 5270 21113 21113 GLGTGTLYIAESR 13 0 1 Unmodified _GLGTGTLYIAESR_ 0 0 0 E9PJF4;P54105;E9PMI6;J3KN38 E9PJF4 E9PJF4 CLNS1A Methylosome subunit pICln MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.3561 2 669.356616 1336.69868 75922.47 0.43828 0.00029337 0.00625 4.1835E-06 0.44453 0.00029755 669.356276656831 674.361415613459 91.914 0.67159 91.914 91.667 92.339 0 155 36 8 0 0 0 0.00013556 1 50287 73.632 54.852 1 0.95278 0.82968 0 2614800 1295100 1319700 13517 1241 5144 5270 21114 21114 GLGVGFGSGGGSSSSVK 17 1 0 Unmodified _GLGVGFGSGGGSSSSVK_ 0 0 0 CON__P13647;P13647;B4E1T1 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.3596 2 720.359887 1438.70522 NaN NaN NaN -0.44121 -0.00031783 NaN NaN NaN NaN 57.5 0.50599 57.5 57.239 57.745 0 0 0 0 0.00668 2 33376 48.044 41.113 1 NaN NaN 0 12133000 12133000 0 + 13518 1162 5145 5271 21115;21116 21115 GLIEIISNAAEYENIPIR 18 0 1 Unmodified _GLIEIISNAAEYENIPIR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1008.5477 2 1008.04403 2014.07351 60726.61 0.62734 0.00063238 0.17709 0.00017851 0.80443 0.0008109 1008.54580781657 1013.54957140942 130.59 0.60486 130.59 130.35 130.95 0 232 38 8 0 0 0 8.3106E-30 3 85093 174.73 174.73 1 0.94112 0.96271 0 35000000 16783000 18217000 13519 1411 5146 5272 21117;21118;21119 21119 GLIEIISNAAEYENIPIR 18 0 1 Unmodified _GLIEIISNAAEYENIPIR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1013.0491 2 1008.04403 2014.07351 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.93 1 130.93 130.43 131.43 1.5259E-05 0 0 0 0.011852 1 85399 43.991 29.43 1 13520 1411 5146 5272 21120 21120 GLIEIISNAAEYENIPIR 18 0 1 Unmodified _GLIEIISNAAEYENIPIR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1013.5496 2 1008.04403 2014.07351 61094.52 0.56436 0.0005689 0.20081 0.00020243 0.76518 0.00077133 1008.54563679881 1013.5495754482 130.22 0.53983 130.22 129.99 130.53 0 239 35 8 0 0 0 5.7277E-06 2 86898 83.204 83.204 1 0.97285 1.06 0 29318000 15676000 13642000 13521 1411 5146 5272 21121;21122 21121 GLIQQFTTITGASESVGK 18 1 0 Unmodified _GLIQQFTTITGASESVGK_ 0 0 0 O94888;H7BYF4 O94888 O94888 UBXN7 UBX domain-containing protein 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 918.9786 2 918.988723 1835.96289 NaN NaN NaN 0.91098 0.00083718 NaN NaN NaN NaN 110.44 0.18407 110.44 110.33 110.52 0 0 0 0 0.044052 1 69293 30.567 20.912 1 NaN NaN 0 7128400 7128400 0 13522 1417 5147 5273 21123 21123 GLIVYQLENQPSEFR 15 0 1 Unmodified _GLIVYQLENQPSEFR_ 0 0 0 Q5J8M4;P78406;E9PQ57;E9PPG9 Q5J8M4 Q5J8M4 RAE1 mRNA export factor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.9665 2 896.965051 1791.91555 NaN NaN NaN -0.066873 -5.9982E-05 NaN NaN NaN NaN 104.95 0.42133 104.95 104.74 105.16 0 0 0 0 1.7906E-05 1 64943 89.548 76.592 1 NaN NaN 0 3962600 3962600 0 13523 1664 5148 5274 21124 21124 GLIVYQLENQPSEFR 15 0 1 Unmodified _GLIVYQLENQPSEFR_ 0 0 0 Q5J8M4;P78406;E9PQ57;E9PPG9 Q5J8M4 Q5J8M4 RAE1 mRNA export factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.968 2 896.965051 1791.91555 64715.32 0.26362 0.00023646 -1.1526 -0.0010338 -0.88893 -0.00079734 897.464821391234 902.470825900111 116.41 0.47562 116.41 116.19 116.66 0 83 19 7 0 0 0 0.0031794 2 68393 42.809 42.809 1 0.76465 0.63985 0 3901900 2052000 1849900 13524 1664 5148 5274 21125;21126 21125 GLLASDLNTDGDMR 14 0 1 Oxidation (M) _GLLASDLNTDGDM(ox)R_ GLLASDLNTDGDM(1)R GLLASDLNTDGDM(45.13)R 0 1 0 A0A024R7K7;A0A024R7M6;Q86YP4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.3544 2 747.348662 1492.68277 NaN NaN NaN 0.9099 0.00068001 NaN NaN NaN NaN 66.18 0.53445 66.18 65.983 66.518 0 0 0 0 0.0063153 1 38185 45.126 32.118 1 NaN NaN 0 8612900 0 8612900 13525 229 5149 5275 21127 21127 167 GLLASDLNTDGDMR 14 0 1 Oxidation (M) _GLLASDLNTDGDM(ox)R_ GLLASDLNTDGDM(1)R GLLASDLNTDGDM(43.6)R 0 1 0 A0A024R7K7;A0A024R7M6;Q86YP4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3491 2 747.348662 1492.68277 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.19 1 65.19 64.69 65.69 0 0 0 0 0.012204 1 38441 43.604 28.914 1 13526 229 5149 5275 21128 21128 167 GLLASDLNTDGDMR 14 0 1 Oxidation (M) _GLLASDLNTDGDM(ox)R_ GLLASDLNTDGDM(1)R GLLASDLNTDGDM(85.96)R 0 1 0 A0A024R7K7;A0A024R7M6;Q86YP4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.3525 2 747.348662 1492.68277 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.811 1 65.811 65.311 66.311 0 0 0 0 0.00015878 1 38852 85.958 69.734 1 13527 229 5149 5275 21129 21129 167 GLLASDLNTDGDMR 14 0 1 Oxidation (M) _GLLASDLNTDGDM(ox)R_ GLLASDLNTDGDM(1)R GLLASDLNTDGDM(80.76)R 0 1 0 A0A024R7K7;A0A024R7M6;Q86YP4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.8555 2 747.348662 1492.68277 71911.74 0.71031 0.00053085 0.33593 0.00025106 1.0462 0.00078191 747.348252103777 752.353995014021 75.968 0.49841 75.968 75.723 76.222 0 98 33 5 0 0 0 6.1253E-05 2 40472 80.763 70.392 1 1.2306 1.0687 0 2300200 1003400 1296800 13528 229 5149 5275 21130;21131 21130 167 GLLATASEDR 10 0 1 Unmodified _GLLATASEDR_ 0 0 0 A0A087X295;Q9NNW5;E9PDU5;B4E256;B4DK45;C9K020 A0A087X295 A0A087X295 WDR6 WD repeat-containing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.7731 2 516.769645 1031.52474 83801.23 0.13969 7.2188E-05 0.70991 0.00036686 0.8496 0.00043905 516.770031517583 521.773767216269 47.378 0.40105 47.378 47.146 47.547 -3.8147E-06 94 30 4 0 0 0 0.017404 1 22890 47.869 30.483 1 0.73519 0.64808 0 1434800 824260 610510 13529 451 5150 5276 21132 21132 GLLATASEDR 10 0 1 Unmodified _GLLATASEDR_ 0 0 0 A0A087X295;Q9NNW5;E9PDU5;B4E256;B4DK45;C9K020 A0A087X295 A0A087X295 WDR6 WD repeat-containing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.7735 2 516.769645 1031.52474 84130.63 -0.027284 -1.41E-05 0.80423 0.0004156 0.77695 0.0004015 516.769928150321 521.773565161125 47.266 0.33926 47.266 47.163 47.502 0 80 27 4 0 0 0 0.010129 1 22354 53.775 36.389 1 0.86196 0.75035 0 1522200 614570 907600 13530 451 5150 5276 21133 21133 GLLCLGNVISALGDDK 16 1 0 Unmodified _GLLCLGNVISALGDDK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.4372 2 822.934905 1643.85526 67297.28 0.92748 0.00076326 0.40308 0.00033171 1.3306 0.001095 822.93518641886 826.942626199382 128.05 0.75108 128.05 127.6 128.35 0 246 47 10 0 0 0 1.9505E-08 2 83409 101.6 101.6 1 0.84981 0.89578 0 30803000 15372000 15430000 13531 1803 5151 5277 21134;21135 21135 GLLCLGNVISALGDDK 16 1 0 Unmodified _GLLCLGNVISALGDDK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.4382 2 822.934905 1643.85526 66850.71 1.0635 0.00087518 0.38146 0.00031392 1.445 0.0011891 822.935112977378 826.942777485593 127.71 0.79315 127.71 127.24 128.03 0 234 48 9 0 0 0 5.8257E-12 3 85239 113.65 113.65 1 0.78491 0.87737 0 100650000 56100000 44549000 13532 1803 5151 5277 21136;21137;21138 21137 GLLCLGNVISALGDDKK 17 2 0 Unmodified _GLLCLGNVISALGDDKK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.0002 3 591.65735 1771.95022 78160.98 0.79077 0.00046787 -0.41233 -0.00024396 0.37844 0.00022391 591.991657582102 596.999699009701 117.67 0.63367 117.67 117.36 118 0 229 40 8 0 0 0 4.6415E-05 2 75167 51.591 51.591 1 0.95485 1.1346 0 24693000 12312000 12381000 13533 1803 5152 5278 21139;21140 21139 GLLCLGNVISALGDDKK 17 2 0 Unmodified _GLLCLGNVISALGDDKK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.6575 3 591.65735 1771.95022 76694.1 0.74228 0.00043917 -0.16849 -9.9689E-05 0.57379 0.00033949 591.991557113984 597.000180026578 117 0.49058 117 116.75 117.24 -7.6294E-06 123 28 7 0 0 0 2.9274E-07 2 76555 97.904 89.728 1 0.86611 0.99823 0 27891000 15792000 12099000 13534 1803 5152 5278 21141;21142 21141 GLLCLGNVISALGDDKK 17 2 0 Unmodified _GLLCLGNVISALGDDKK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 591.6582 3 591.65735 1771.95022 77697.7 0.65079 0.00038504 0.025143 1.4876E-05 0.67593 0.00039992 591.657439253323 597.000217748582 129.68 0.61067 129.68 129.41 130.02 0 146 27 9 0 0 0 1.686E-05 3 78401 55.589 48.053 1 1.5599 1.3275 0 28804000 11539000 17265000 13535 1803 5152 5278 21143;21144;21145 21145 GLLCLGNVISALGDDKK 17 2 0 Unmodified _GLLCLGNVISALGDDKK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 895.4981 2 886.982386 1771.95022 65715.58 0.57862 0.00051323 -0.55438 -0.00049173 0.024238 2.1499E-05 886.982158406759 894.996043219285 129.68 0.39044 129.68 129.46 129.86 0 81 17 7 0 0 0 0.00063909 1 78478 48.277 48.277 1 1.545 1.3218 0 10403000 4059300 6343400 13536 1803 5152 5278 21146 21146 GLLCLGNVISALGDDKK 17 2 0 Unmodified _GLLCLGNVISALGDDKK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 591.6591 3 591.65735 1771.95022 78830.3 0.93902 0.00055558 0.37328 0.00022085 1.3123 0.00077643 591.657406210224 597.000347785848 129.34 0.45563 129.34 129.18 129.63 0 64 20 11 0 0 0 1.7387E-05 2 77350 64.507 64.507 1 1.861 1.5756 0 15409000 5988900 9420300 13537 1803 5152 5278 21147;21148 21148 GLLEDVQEGR 10 0 1 Unmodified _GLLEDVQEGR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.2928 2 558.288202 1114.56185 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.619 1 64.619 64.119 65.119 0 0 0 0 0.008093 1 37147 60.019 22.461 1 13538 397;1622 5153 5279 21149 21149 GLLEDVQEGR 10 0 1 Unmodified _GLLEDVQEGR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.293 2 558.288202 1114.56185 79242.3 0.64621 0.00036077 -0.58554 -0.0003269 0.060669 3.3871E-05 558.28823778957 563.292647085045 63.415 0.81973 63.415 63.032 63.851 3.8147E-06 245 69 6 0 0 0 0.00126 2 37263 74.464 38.069 1 1.7161 1.6928 0 14796000 6639800 8156400 13539 397;1622 5153 5279 21150;21151 21151 GLLEESSFATLFPK 14 1 0 Unmodified _GLLEESSFATLFPK_ 0 0 0 Q13601;B4DMS5 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.9167 2 769.908682 1537.80281 69749.38 0.61631 0.00047451 -0.032303 -2.487E-05 0.58401 0.00044963 769.908714679223 773.915558841723 122.83 0.67082 122.83 122.57 123.24 0 321 50 10 0 0 0 1.3527E-06 2 79468 108.7 90.833 1 1.1261 1.2702 0 77843000 37177000 40666000 13540 1717 5154 5280 21152;21153 21153 GLLEESSFATLFPK 14 1 0 Unmodified _GLLEESSFATLFPK_ 0 0 0 Q13601;B4DMS5 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.9107 2 769.908682 1537.80281 69994.38 0.77152 0.000594 0.086879 6.6889E-05 0.8584 0.00066089 769.90883252688 773.915666942536 122.37 0.69753 122.37 122.04 122.74 0 334 55 9 0 0 0 1.9301E-09 2 80995 118.28 100.41 1 1.101 1.2308 0 87249000 41563000 45686000 13541 1717 5154 5280 21154;21155 21155 GLLEESSFATLFPK 14 1 0 Unmodified _GLLEESSFATLFPK_ 0 0 0 Q13601;B4DMS5 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.418 2 769.908682 1537.80281 69324.7 0.97994 0.00075446 0.058147 4.4768E-05 1.0381 0.00079923 769.90875933707 773.915622592888 134.51 0.3412 134.51 134.41 134.75 0 46 10 8 0 0 0 4.5577E-15 1 82147 136.48 119.8 1 1.2185 1.001 0 38234000 17743000 20491000 13542 1717 5154 5280 21156 21156 GLLEESSFATLFPK 14 1 0 Unmodified _GLLEESSFATLFPK_ 0 0 0 Q13601;B4DMS5 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 773.9161 2 769.908682 1537.80281 70173.82 0.84275 0.00064884 -0.12055 -9.2811E-05 0.72221 0.00055603 769.90850290836 773.91516736963 134.45 0.31561 134.45 134.28 134.59 0 49 11 9 0 0 0 7.2726E-22 2 81191 149.31 131.44 1 1.065 0.88865 0 42041000 22600000 19440000 13543 1717 5154 5280 21157;21158 21157 GLLINFIHHNWPSLLK 16 1 0 Unmodified _GLLINFIHHNWPSLLK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8632 3 634.696467 1901.06757 77242.99 0.9953 0.00063171 0.37061 0.00023522 1.3659 0.00086694 635.031272668823 637.702471673814 145.3 0.13031 145.3 145.26 145.39 0 9 3 4 0 0 0 4.6874E-05 1 91327 65.467 34.511 1 NaN NaN 0 11214000 7564500 3649800 13544 1679 5155 5281 21159 21159 GLLINFIHHNWPSLLK 16 1 0 Unmodified _GLLINFIHHNWPSLLK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.0327 3 634.696467 1901.06757 NaN NaN NaN 0.043376 2.7531E-05 NaN NaN NaN NaN 131.91 0.64902 131.91 131.65 132.3 0 0 0 0 6.907E-05 2 86009 71.344 40.111 1 NaN NaN 0 3598600 3598600 0 13545 1679 5155 5281 21160;21161 21160 GLLINFIHHNWPSLLK 16 1 0 Unmodified _GLLINFIHHNWPSLLK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.6971 3 634.696467 1901.06757 NaN NaN NaN 0.5065 0.00032147 NaN NaN NaN NaN 131.86 0.91879 131.86 131.46 132.38 0 0 0 0 0.0040394 2 88033 47.545 37.06 1 NaN NaN 0 7240200 7240200 0 13546 1679 5155 5281 21162;21163 21162 GLLINFIHHNWPSLLK 16 1 0 Unmodified _GLLINFIHHNWPSLLK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.3695 3 634.696467 1901.06757 75814.29 0.62341 0.00039568 0.045508 2.8884E-05 0.66892 0.00042456 634.696431100802 637.367929346073 129.85 0.64423 129.85 129.58 130.22 0 157 29 8 0 0 0 4.5272E-05 2 78520 75.574 75.574 1 1.1193 0.89717 0 7439100 3350100 4089000 13547 1679 5155 5281 21164;21165 21164 GLLINFIHHNWPSLLK 16 1 0 Unmodified _GLLINFIHHNWPSLLK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.0328 3 634.696467 1901.06757 76139.51 0.98922 0.00062785 1.4108 0.00089546 2.4001 0.0015233 635.031740744036 637.368703377518 129.59 0.50964 129.59 129.29 129.8 0 82 21 8 0 0 0 6.4002E-05 2 77540 59.513 59.513 1 1.0322 0.87498 0 64118000 31681000 32437000 13548 1679 5155 5281 21166;21167 21167 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.367 3 644.03185 1929.07372 74938.13 0.99084 0.00063813 -0.20061 -0.0001292 0.79023 0.00050893 644.365982364019 647.702115636543 131.97 1.1347 131.97 131.62 132.76 -1.5259E-05 502 74 8 0 0 0 1.103E-06 4 86018 88.73 88.73 1 0.71802 0.74908 0 38559000 21294000 17265000 13549 1471 5156 5282 21168;21169;21170;21171 21168 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8715 3 644.03185 1929.07372 75072.6 1.1179 0.00071999 -0.2037 -0.00013119 0.91424 0.0005888 644.366049993146 647.701779333247 145.29 0.33829 145.29 145.25 145.59 0 55 14 7 0 0 0 8.8688E-13 1 91319 119.54 119.54 1 0.63819 0.73374 0 143290000 88402000 54889000 13550 1471 5156 5282 21172 21172 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.0324 3 644.03185 1929.07372 74796.13 0.95623 0.00061584 -0.20725 -0.00013348 0.74898 0.00048236 644.365996785505 647.367794353992 131.88 1.3097 131.88 131.39 132.7 0 599 87 8 0 0 0 2.968E-05 3 88132 79.771 79.771 1 0.67557 0.77559 0 79433000 45138000 34295000 13551 1471 5156 5282 21173;21174;21175 21174 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.7026 3 644.03185 1929.07372 74756.52 0.69336 0.00044655 0.1383 8.9066E-05 0.83166 0.00053561 644.366583240092 647.702163124695 130.4 1.9509 130.4 129.77 131.72 0 585 92 8 0 0 0 6.1164E-09 5 78852 101.39 101.39 1 1.3923 1.1999 0 66170000 28912000 37258000 13552 1471 5156 5282 21176;21177;21178;21179;21180 21176 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.7025 3 644.03185 1929.07372 74305.77 0.89954 0.00057934 -0.49358 -0.00031788 0.40597 0.00026145 644.365827471696 647.701707875287 131.97 0.8634 131.97 131.63 132.49 0 96 40 5 0 0 0 0.0012379 2 80059 36.593 36.593 1 1.5118 1.2851 0 2865600 1120100 1745500 13553 1471 5156 5282 21181;21182 21181 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.3688 3 644.03185 1929.07372 75698.23 0.8848 0.00056984 -0.16065 -0.00010346 0.72415 0.00046638 644.031465008001 647.367865810665 145.4 0.13379 145.4 145.36 145.49 0 21 7 7 0 0 0 0.0035955 2 85357 32.815 32.815 1 1.5691 1.3197 0 4451500 1722300 2729200 13554 1471 5156 5282 21183;21184 21183 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.3668 3 644.03185 1929.07372 NaN NaN NaN -0.24064 -0.00015498 NaN NaN NaN NaN 134.01 0.26245 134.01 133.86 134.12 0 0 0 0 0.01175 1 81726 37.083 20.005 1 NaN NaN 0 2436100 2436100 0 13555 1471 5156 5282 21185 21185 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.033 3 644.03185 1929.07372 74373.91 1.0344 0.00066621 0.68523 0.00044131 1.7197 0.0011075 644.367170925699 647.368212125047 129.96 0.9137 129.96 129.63 130.55 0 197 35 11 0 0 0 0.00010594 2 77681 53.169 53.169 1 1.314 1.1473 0 127100000 56405000 70699000 13556 1471 5156 5282 21186;21187 21187 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.2753 4 483.275707 1929.07372 85346.84 0.73574 0.00035556 0.80935 0.00039114 1.5451 0.0007467 483.526725863407 485.777958469246 129.96 0.59222 129.96 129.75 130.34 0 44 22 5 0 0 0 0.0030781 1 77800 42.338 42.338 1 0.82345 0.69525 0 4737500 1729600 3007900 13557 1471 5156 5282 21188 21188 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.7026 3 644.03185 1929.07372 74549.65 0.96715 0.00062287 0.10473 6.745E-05 1.0719 0.00069032 644.366302496519 647.70213620641 130.76 1.0429 130.76 130.46 131.5 0 161 45 8 0 0 0 0.00064717 1 78309 42.338 42.338 1 1.2114 1.0569 0 52709000 22796000 29914000 13558 1471 5156 5282 21189 21189 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.7025 3 644.03185 1929.07372 75701.37 1.218 0.00078441 1.0447 0.00067282 2.2627 0.0014572 644.032547233734 647.702930367453 133.98 0.43567 133.98 133.74 134.17 0 59 21 8 0 0 0 6.2664E-08 1 80795 99.481 82.199 1 3.3571 2.7381 0 9467400 1765000 7702300 13559 1471 5156 5282 21190 21190 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.0329 3 644.03185 1929.07372 75360.85 0.8805 0.00056707 0.17495 0.00011267 1.0554 0.00067974 644.366372991199 647.368076044479 145.39 0.22421 145.39 145.37 145.59 0 39 12 7 0 0 0 0.021716 1 84693 21.534 21.534 1 1.2841 1.0424 0 10089000 4737600 5351100 13560 1471 5156 5282 21191 21191 GLLINFIHHNWPSLLR 16 0 1 Unmodified _GLLINFIHHNWPSLLR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.3682 3 644.03185 1929.07372 NaN NaN NaN 2.128 0.0013705 NaN NaN NaN NaN 131.61 0.11908 131.61 131.53 131.65 0 0 0 0 0.048049 1 79040 25.167 8.0885 1 NaN NaN 0 2316200 2316200 0 13561 1471 5156 5282 21192 21192 GLLKPGLNVVLEGPK 15 2 0 Unmodified _GLLKPGLNVVLEGPK_ 0 0 1 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.3257 3 511.983614 1532.92901 85740.24 0.5905 0.00030233 0.27095 0.00013872 0.86145 0.00044105 512.31788298911 517.326641467884 108.39 0.36288 108.39 108.2 108.56 0 48 16 4 0 0 0 0.031946 1 62248 17.242 17.242 1 1.2445 1.0999 0 2435200 1051400 1383800 13562 1316 5157 5283 21193 21193 GLLKPGLNVVLEGPK 15 2 0 Unmodified _GLLKPGLNVVLEGPK_ 0 0 1 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.3265 3 511.983614 1532.92901 86802.13 0.40332 0.00020649 -0.040068 -2.0514E-05 0.36325 0.00018598 511.983586253489 517.326434134564 108.11 0.35456 108.11 107.85 108.2 0 53 17 4 0 0 0 0.055418 1 61134 12.201 12.201 1 1.3553 1.1917 0 1984400 1014300 970090 13563 1316 5157 5283 21194 21194 GLLLYGPPGTGK 12 1 0 Unmodified _GLLLYGPPGTGK_ 0 0 0 K7EM02;K7EIJ8;Q8IYT4 K7EM02 K7EM02 KATNAL2 Katanin p60 ATPase-containing subunit A-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8464 2 586.837331 1171.66011 NaN NaN NaN 0.17934 0.00010525 NaN NaN NaN NaN 83.608 0.43298 83.608 83.369 83.802 0 0 0 0 0.0012479 1 49955 80.231 0 1 NaN NaN 0 4751900 0 4751900 13564 1341 5158 5284 21195 21195 GLLLYGPPGTGK 12 1 0 Unmodified _GLLLYGPPGTGK_ 0 0 0 K7EM02;K7EIJ8;Q8IYT4 K7EM02 K7EM02 KATNAL2 Katanin p60 ATPase-containing subunit A-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8451 2 586.837331 1171.66011 NaN NaN NaN 0.4493 0.00026367 NaN NaN NaN NaN 82.549 0.4048 82.549 82.279 82.684 0 0 0 0 0.0012064 1 50436 80.688 0 1 NaN NaN 0 11413000 0 11413000 13565 1341 5158 5284 21196 21196 GLLPEELTPLILATQK 16 1 0 Unmodified _GLLPEELTPLILATQK_ 0 0 0 A0A0S2Z3L0;P13804;A0A0S2Z3M4;H0YL12;H0YKF0;H0YLU7 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.5212 2 868.513845 1735.01314 65580.01 0.95691 0.00083109 -0.089154 -7.7432E-05 0.86775 0.00075366 869.015347928085 872.520698721549 132.41 0.68771 132.41 132.01 132.69 0 256 45 8 0 0 0 0.00017365 2 86292 61.11 61.11 1 4.1233 4.2873 0 29600000 6459400 23141000 13566 553 5159 5285 21197;21198 21197 GLLPEELTPLILATQK 16 1 0 Unmodified _GLLPEELTPLILATQK_ 0 0 0 A0A0S2Z3L0;P13804;A0A0S2Z3M4;H0YL12;H0YKF0;H0YLU7 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.5142 2 868.513845 1735.01314 65789.52 0.83329 0.00072372 -0.04857 -4.2184E-05 0.78472 0.00068154 868.513547186274 872.520707013552 131.93 0.63925 131.93 131.57 132.21 0 252 44 7 0 0 0 0.0057582 2 88224 35.737 35.737 1 3.9909 4.0532 0 29952000 6440300 23512000 13567 553 5159 5285 21199;21200 21200 GLLPGLLPAPADK 13 1 0 Unmodified _GLLPGLLPAPADK_ 0 0 0 Q6P2E9;B7Z7V8 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3858 2 631.379363 1260.74417 NaN NaN NaN -1.5925 -0.0010055 NaN NaN NaN NaN 111.65 0.4306 111.65 111.4 111.83 7.6294E-06 0 0 0 0.0088381 1 72096 53.751 43.52 1 NaN NaN 0 2961100 0 2961100 13568 1853 5160 5286 21201 21201 GLLQPVK 7 1 0 Unmodified _GLLQPVK_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 381.7522 2 377.744714 753.474875 NaN NaN NaN 0.38621 0.00014589 NaN NaN NaN NaN 47.075 0.47215 47.075 46.939 47.411 0 0 0 0 0.04187 1 25480 62.338 38.543 1 NaN NaN 0 42028000 0 42028000 13569 2038 5161 5287 21202 21202 GLLQSGQIPGR 11 0 1 Unmodified _GLLQSGQIPGR_ 0 0 0 Q53G61;Q53G21;P09661;H0YMA0;H0YLR3 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.3264 2 563.32238 1124.63021 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.95 1 61.95 61.45 62.45 0 0 0 0 0.00052993 1 35515 75.043 53.297 1 13570 1461 5162 5288 21203 21203 GLLSAEVAR 9 0 1 Unmodified _GLLSAEVAR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.2706 2 458.266542 914.51853 NaN NaN NaN -0.35283 -0.00016169 NaN NaN NaN NaN 57.589 1.1376 57.589 57.022 58.159 0 0 0 0 0.0036992 1 32562 77.923 6.5801 1 NaN NaN 0 53376000 0 53376000 13571 1754 5163 5289 21204 21204 GLLSAEVAR 9 0 1 Unmodified _GLLSAEVAR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.2666 2 458.266542 914.51853 87959.01 0.19692 9.0241E-05 -0.00037614 -1.7237E-07 0.19654 9.0069E-05 458.266651496649 463.270528992413 56.556 1.43 56.556 55.796 57.226 0 442 108 6 0 0 0 0.0022212 1 32575 75.213 28.549 1 1.0784 1.2283 0 106030000 39733000 66296000 13572 1754 5163 5289 21205 21205 GLLSAEVAR 9 0 1 Unmodified _GLLSAEVAR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 463.2709 2 458.266542 914.51853 88848.87 0.0075203 3.4463E-06 0.10903 4.9964E-05 0.11655 5.341E-05 458.266449161083 463.270627451645 66.949 0.78704 66.949 66.5 67.287 0 154 45 5 0 0 0 0.063915 1 34064 35.438 4.1343 1 1.8974 1.6206 0 2892700 897090 1995600 13573 1754 5163 5289 21206 21206 GLLSSLDHTSIR 12 0 1 Unmodified _GLLSSLDHTSIR_ 0 0 0 Q8TBT6;P08574 Q8TBT6 Q8TBT6 CYC1 Cytochrome c1, heme protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8596 2 649.856783 1297.69901 74959.17 0.65715 0.00042706 -0.13551 -8.806E-05 0.52165 0.000339 649.856343905008 654.86072071215 75.293 0.58336 75.293 74.974 75.557 0 187 50 6 0 0 0 0.011152 1 45448 45.908 33.701 1 0.89586 0.90907 0 20305000 9737400 10567000 13574 1456 5164 5290 21207 21207 GLLVDRPSETK 11 1 1 Unmodified _GLLVDRPSETK_ 0 0 1 G3V3B0;Q69YJ6;S4R3H4;E7EQT4;Q9UKV3;B4DQZ7 G3V3B0 G3V3B0 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8517 2 607.840602 1213.66665 79756.41 0.49638 0.00030172 0.21522 0.00013082 0.7116 0.00043254 607.840665017238 616.852043512258 33.942 0.4468 33.942 33.662 34.109 0 149 42 5 0 0 0 2.0205E-07 2 16885 114.4 83.327 1 1.0096 1.1447 0 23814000 11051000 12762000 13575 1220 5165 5291 21208;21209 21208 GLPFQANAQDIINFFAPLKPVR 22 1 1 Unmodified _GLPFQANAQDIINFFAPLKPVR_ 0 0 1 A0A024RD99;B7Z2D8;B7Z5F9;B3KP14;H0Y8R1;F5H5I6;B7Z3R7;H0YAK1;B3KW50;Q12849 A0A024RD99 A0A024RD99 GRSF1 G-rich sequence factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 825.4434 3 819.453143 2455.3376 NaN NaN NaN 0.51251 0.00041998 NaN NaN NaN NaN 133.46 0.40897 133.46 133.37 133.78 0 0 0 0 5.3649E-24 1 89659 114.88 90.874 1 NaN NaN 0 24736000 0 24736000 13576 381 5166 5292 21210 21210 GLPLGSAVSSPVLFSPVGR 19 0 1 Unmodified _GLPLGSAVSSPVLFSPVGR_ 0 0 0 B4E206;Q8WUM0 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 925.525 2 920.519993 1839.02543 65143.74 1.0204 0.00093933 0.14314 0.00013176 1.1636 0.0010711 920.51987761142 925.524267057812 133.94 0.3665 133.94 133.67 134.04 0 59 16 7 0 0 0 0.00037693 2 80742 42.568 42.568 1 1.6797 1.4853 0 3933300 1688300 2245000 13577 1070 5167 5293 21211;21212 21211 GLPNLITHK 9 1 0 Unmodified _GLPNLITHK_ 0 0 0 Q2TB10;A0A087WXB4;C9JHX9;C9K0M9;C9JLY3 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.8054 2 496.798009 991.581465 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.005 1 54.005 53.505 54.505 0 0 0 0 0.0028738 1 30305 79.809 43.929 1 13578 1777 5168 5294 21213 21213 GLPNLITHK 9 1 0 Unmodified _GLPNLITHK_ 0 0 0 Q2TB10;A0A087WXB4;C9JHX9;C9K0M9;C9JLY3 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.805 2 496.798009 991.581465 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.094 1 54.094 53.594 54.594 0 0 0 0 0.015002 1 30365 58.815 19.152 1 13579 1777 5168 5294 21214 21214 GLPQLGTLGAGNHYAEIQVVDEIFNEYAAK 30 1 0 Unmodified _GLPQLGTLGAGNHYAEIQVVDEIFNEYAAK_ 0 0 0 Q9Y3I0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1076.2167 3 1073.21032 3216.60914 57725.15 0.48568 0.00052124 0.32207 0.00034565 0.80775 0.00086689 1073.54468668593 1076.55075964647 133.15 0.24799 133.15 133.05 133.3 0 42 7 10 0 0 0 1.2633E-19 2 89335 75.717 63.514 1 1.091 1.2296 0 60550000 28478000 32073000 13580 2137 5169 5295 21215;21216 21215 GLPWSCSADEVQR 13 0 1 Unmodified _GLPWSCSADEVQR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E7EN40;D6RDL0;D6R9D3;D6RF17 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.8511 2 752.84609 1503.67763 68606.67 0.20748 0.0001562 -0.17599 -0.00013249 0.031487 2.3705E-05 752.846539110898 757.85041355721 72.42 0.80634 72.42 72.018 72.825 0 217 53 6 0 0 0 0.00012278 2 42317 90.685 77.594 1 2.0219 2.1652 0 45679000 14114000 31565000 13581 1231 5170 5296 21217;21218 21217 GLPWSCSADEVQR 13 0 1 Unmodified _GLPWSCSADEVQR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E7EN40;D6RDL0;D6R9D3;D6RF17 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.8467 2 752.84609 1503.67763 69403.73 0.34189 0.00025739 -0.36204 -0.00027256 -0.020148 -1.5168E-05 752.846699648627 757.850337306862 71.233 0.70137 71.233 70.941 71.643 0 210 50 6 0 0 0 0.00010871 2 42648 91.855 80.69 1 2.01 2.2923 0 49847000 16142000 33705000 13582 1231 5170 5296 21219;21220 21220 GLPWSCSADEVQR 13 0 1 Unmodified _GLPWSCSADEVQR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E7EN40;D6RDL0;D6R9D3;D6RF17 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.851 2 752.84609 1503.67763 69303.97 0.59515 0.00044806 -0.048843 -3.6772E-05 0.54631 0.00041129 752.846890179057 757.850666618571 82.74 1.0301 82.74 82.066 83.096 0 263 61 9 0 0 0 0.0071136 1 45086 45.433 38.9 1 1.4476 1.2437 0 7960600 3657200 4303300 13583 1231 5170 5296 21221 21221 GLPWSCSADEVQR 13 0 1 Unmodified _GLPWSCSADEVQR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E7EN40;D6RDL0;D6R9D3;D6RF17 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.8508 2 752.84609 1503.67763 70258.18 0.50656 0.00038136 -0.088065 -6.63E-05 0.4185 0.00031507 752.846500234874 757.850471177839 82.956 1.0661 82.956 82.227 83.293 -7.6294E-06 222 61 8 0 0 0 0.0059061 1 44370 46.796 35.632 1 1.4758 1.2297 0 6895900 2894700 4001200 13584 1231 5170 5296 21222 21222 GLQALEEGIK 10 1 0 Unmodified _GLQALEEGIK_ 0 0 0 REV__D3VVB6 REV__D3VVB6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.2975 2 529.298039 1056.58152 84377.75 0.22606 0.00011965 -0.1827 -9.6705E-05 0.043353 2.2946E-05 529.29780201743 533.305019749472 65.345 0.8639 65.345 64.895 65.759 0 309 77 5 0 0 0 0.0012959 2 37522 74.301 42.997 1 1.1213 1.1872 0 31258000 15089000 16170000 + 13585 2174 5171 5297 21223;21224 21224 GLQALEEGIK 10 1 0 Unmodified _GLQALEEGIK_ 0 0 0 REV__D3VVB6 REV__D3VVB6 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.3049 2 529.298039 1056.58152 84377.75 0.22606 0.00011965 -0.1827 -9.6705E-05 0.043353 2.2946E-05 529.29780201743 533.305019749472 65.345 0.8639 65.345 64.895 65.759 0 309 77 5 0 0 0 0.053383 1 37496 69.598 40.449 1 1.1213 1.1872 0 31258000 15089000 16170000 + 13586 2174 5171 5297 21225 21225 GLQALEEGIK 10 1 0 Unmodified _GLQALEEGIK_ 0 0 0 REV__D3VVB6 REV__D3VVB6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.3053 2 529.298039 1056.58152 83439.08 0.34913 0.00018479 -0.28571 -0.00015123 0.063418 3.3567E-05 529.29788010192 533.304856937356 64.264 0.84865 64.264 63.818 64.667 0 299 79 5 0 0 0 0.00089646 2 37633 79.474 52.22 1 1.1607 1.233 0 36141000 16871000 19270000 + 13587 2174 5171 5297 21226;21227 21226 GLQALEEGIK 10 1 0 Unmodified _GLQALEEGIK_ 0 0 0 REV__D3VVB6 REV__D3VVB6 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.3053 2 529.298039 1056.58152 83439.08 0.34913 0.00018479 -0.28571 -0.00015123 0.063418 3.3567E-05 529.29788010192 533.304856937356 64.264 0.84865 64.264 63.818 64.667 0 299 79 5 0 0 0 0.054658 1 37633 79.474 52.22 1 1.1607 1.233 0 36141000 16871000 19270000 + 13588 2174 5171 5297 21228 21228 GLQAQIASSGLTVEVDAPK 19 1 0 Unmodified _GLQAQIASSGLTVEVDAPK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 947.0146 2 942.50728 1883.00001 63565.55 0.89602 0.00084451 -0.90829 -0.00085607 -0.012266 -1.1561E-05 943.007906109597 946.513404362762 112.74 0.30959 112.74 112.52 112.83 0 66 15 8 0 0 0 2.8431E-24 1 65474 137.8 129.89 1 2.2053 1.7665 0 8490800 2673800 5817100 13589 316 5172 5298 21229 21229 GLQAQIASSGLTVEVDAPK 19 1 0 Unmodified _GLQAQIASSGLTVEVDAPK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 947.0159 2 942.50728 1883.00001 62420.23 0.67194 0.00063331 -0.23216 -0.00021882 0.43977 0.00041449 942.506652036176 946.514335701888 112.55 0.45016 112.55 112.38 112.83 -7.6294E-06 66 22 6 0 0 0 0.00046414 1 64463 40.751 38.847 1 1.9254 1.5432 0 19648000 6346000 13302000 13590 316 5172 5298 21230 21230 GLQCGAPLSLVDLAGSER 18 0 1 Unmodified _GLQCGAPLSLVDLAGSER_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063;A0A087X1W5 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.9779 2 921.97255 1841.93055 64796.75 0.41414 0.00038182 -0.088662 -8.1744E-05 0.32548 0.00030008 922.474083812513 926.976538306382 113.52 0.41837 113.52 113.33 113.74 0 112 28 6 0 0 0 0.0016582 1 73655 36.445 25.54 1 0.90867 0.89891 0 12430000 6641800 5787800 13591 371 5173 5299 21231 21231 GLQCGAPLSLVDLAGSER 18 0 1 Unmodified _GLQCGAPLSLVDLAGSER_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063;A0A087X1W5 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 927.4771 2 921.97255 1841.93055 63882.46 0.76931 0.00070928 -0.12084 -0.00011142 0.64846 0.00059786 921.971981179109 926.977039146938 125.5 0.57736 125.5 125.22 125.8 -7.6294E-06 96 21 7 0 0 0 0.0004311 2 75305 45.207 36.694 1 1.212 1.0187 0 4382300 2075400 2306900 13592 371 5173 5299 21232;21233 21232 GLQCGAPLSLVDLAGSER 18 0 1 Unmodified _GLQCGAPLSLVDLAGSER_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063;A0A087X1W5 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 927.4797 2 921.97255 1841.93055 63511.43 0.61579 0.00056774 -0.23229 -0.00021417 0.3835 0.00035357 922.473968321638 927.478866034482 125.34 0.4792 125.34 125.08 125.56 0 98 19 8 0 0 0 0.0055277 2 74272 33.147 33.147 1 1.1949 0.99131 0 5090800 2268900 2821900 13593 371 5173 5299 21234;21235 21234 GLQDVLR 7 0 1 Unmodified _GLQDVLR_ 0 0 0 Q59ET3;B2R9K8;A0A024RDL1;P40227;Q92526 Q59ET3 Q59ET3 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.7392 2 400.734877 799.455202 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.248 1 61.248 60.748 61.748 0 0 0 0 0.040227 1 35028 69.432 7.435 1 13594 389 5174 5300 21236 21236 GLQEVGLPLHR 11 0 1 Unmodified _GLQEVGLPLHR_ 0 0 0 A8K5J1;P11172;B5LY71;B5LY69;B5LY70;B5LY64 A8K5J1 A8K5J1 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase;Orotidine 5-phosphate decarboxylase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.2386 3 406.903295 1217.68806 NaN NaN NaN 1.1636 0.00047349 NaN NaN NaN NaN 67.502 0.073853 67.502 67.449 67.523 0 0 0 0 0.037651 1 40011 34.755 23.023 1 NaN NaN 0 4882200 0 4882200 13595 749 5175 5301 21237 21237 GLQNPFPQQMQNNSR 15 0 1 Oxidation (M) _GLQNPFPQQM(ox)QNNSR_ GLQNPFPQQM(1)QNNSR GLQNPFPQQM(65.84)QNNSR 0 1 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.4268 2 887.918109 1773.82167 64972.39 0.50808 0.00045113 0.36145 0.00032094 0.86953 0.00077207 888.419736683571 893.424386298393 51.205 0.35262 51.205 51.078 51.431 3.8147E-06 67 26 4 0 0 0 0.00010724 1 29006 65.842 57.245 1 0.75549 0.75716 0 6791300 3870200 2921100 13596 1396 5176 5302 21238 21238 1073 GLQQQNSDWYLK 12 1 0 Unmodified _GLQQQNSDWYLK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;Q6P1N4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3719 2 740.364973 1478.71539 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.274 1 70.274 69.774 70.774 0 0 0 0 0.017695 1 40875 52.725 31.855 1 13597 352 5177 5303 21239 21239 GLQSYYAVAHAVTER 15 0 1 Unmodified _GLQSYYAVAHAVTER_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.954 3 555.617883 1663.83182 82326.22 0.67834 0.0003769 -0.16255 -9.0314E-05 0.51579 0.00028658 555.617756291026 558.953791591182 79.512 0.61738 79.512 79.218 79.836 0 228 54 6 0 0 0 0.00058854 1 47209 46.41 46.41 1 0.78687 0.79813 0 18157000 10517000 7639500 13598 695 5178 5304 21240 21240 GLQSYYAVAHAVTER 15 0 1 Unmodified _GLQSYYAVAHAVTER_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.9279 2 832.923186 1663.83182 68871.88 0.70094 0.00058383 0.047962 3.9949E-05 0.74891 0.00062378 832.923413355792 837.927290293129 77.985 0.51044 77.985 77.761 78.271 7.6294E-06 178 42 6 0 0 0 4.9552E-05 1 47214 72.496 72.496 1 0.80703 0.81531 0 19798000 9744400 10054000 13599 695 5178 5304 21241 21241 GLSAEEVTR 9 0 1 Unmodified _GLSAEEVTR_ 0 0 0 Q9ULX9;B0QY70;B0QY71 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.2513 2 481.251089 960.487624 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.186 1 31.186 30.686 31.686 0 0 0 0 0.0016019 1 15366 91.853 27.077 1 13600 2112 5179 5305 21242 21242 GLSAEEVTR 9 0 1 Unmodified _GLSAEEVTR_ 0 0 0 Q9ULX9;B0QY70;B0QY71 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.2544 2 481.251089 960.487624 88592.48 0.25482 0.00012263 0.06105 2.938E-05 0.31587 0.00015201 481.251171924994 486.25517901087 30.983 0.51245 30.983 30.576 31.089 0 147 43 4 0 0 0 0.0010227 3 15138 91.069 58.228 1 1.0504 1.1422 0 28654000 14707000 13946000 13601 2112 5179 5305 21243;21244;21245 21245 GLSAEEVTR 9 0 1 Unmodified _GLSAEEVTR_ 0 0 0 Q9ULX9;B0QY70;B0QY71 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.2552 2 481.251089 960.487624 86764.15 -0.011868 -5.7116E-06 -0.69263 -0.00033333 -0.7045 -0.00033904 481.249728179202 486.255192695316 35.83 1.2269 35.83 35.433 36.66 0 305 105 6 0 0 0 0.0028653 2 15916 73.248 43.063 1 1.1727 1.0059 0 6224500 2865600 3358800 13602 2112 5179 5305 21246;21247 21247 GLSAEEVTR 9 0 1 Unmodified _GLSAEEVTR_ 0 0 0 Q9ULX9;B0QY70;B0QY71 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.2513 2 481.251089 960.487624 87846.02 0.36987 0.000178 -0.15367 -7.3954E-05 0.2162 0.00010405 481.250884653512 486.254989398872 35.605 0.57444 35.605 35.443 36.018 0 144 47 5 0 0 0 0.0049382 2 15420 67.993 41.39 1 1.5714 1.3037 0 5140100 2225100 2915000 13603 2112 5179 5305 21248;21249 21248 GLSASYLEPDRYDEEEEGEESISLAAIK 28 1 1 Unmodified _GLSASYLEPDRYDEEEEGEESISLAAIK_ 0 0 1 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1034.488 3 1034.15421 3099.4408 59123.66 0.54045 0.00055891 -0.017038 -1.762E-05 0.52341 0.00054129 1034.48882467661 1040.49590634898 108.22 0.89767 108.22 107.76 108.66 0 404 68 10 0 0 0 6.2004E-11 2 67497 59.628 57.649 1 1.5436 1.8353 0 45724000 15750000 29974000 13604 1012 5180 5306 21250;21251 21251 GLSASYLEPDRYDEEEEGEESISLAAIK 28 1 1 Unmodified _GLSASYLEPDRYDEEEEGEESISLAAIK_ 0 0 1 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1034.4883 3 1034.15421 3099.4408 59520.8 0.51392 0.00053147 -0.20612 -0.00021316 0.3078 0.00031832 1034.48862250781 1040.4956587812 107.57 1.1174 107.57 107.15 108.27 0 387 79 10 0 0 0 5.712E-19 2 68661 76.161 70.841 1 1.6014 1.8688 0 46628000 16399000 30229000 13605 1012 5180 5306 21252;21253 21253 GLSASYLEPDRYDEEEEGEESISLAAIK 28 1 1 Unmodified _GLSASYLEPDRYDEEEEGEESISLAAIK_ 0 0 1 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1040.498 3 1034.15421 3099.4408 59095.77 0.58552 0.00060552 0.25524 0.00026395 0.84076 0.00086947 1034.48870315929 1040.16185097734 118.95 1.0188 118.95 118.51 119.53 0 219 46 10 0 0 0 0.023966 2 70300 19.241 15.29 1 1.4874 1.2623 0 8709600 2661900 6047800 13606 1012 5180 5306 21254;21255 21254 GLSASYLEPDRYDEEEEGEESISLAAIK 28 1 1 Unmodified _GLSASYLEPDRYDEEEEGEESISLAAIK_ 0 0 1 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1040.4973 3 1034.15421 3099.4408 59212.71 0.61427 0.00063525 0.20829 0.00021541 0.82257 0.00085066 1034.82268109713 1040.16178442224 118.84 0.8115 118.84 118.45 119.26 7.6294E-06 228 36 10 0 0 0 0.0005829 1 69292 29.61 29.61 1 1.7238 1.4548 0 8987400 3402800 5584600 13607 1012 5180 5306 21256 21256 GLSEAAGQTAQMLER 15 0 1 Oxidation (M) _GLSEAAGQTAQM(ox)LER_ GLSEAAGQTAQM(1)LER GLSEAAGQTAQM(96.07)LER 0 1 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.3895 2 789.383036 1576.75152 69067.38 0.58431 0.00046125 -0.33725 -0.00026622 0.24706 0.00019503 789.382763224174 794.3869289278 60.091 0.71891 60.091 59.67 60.389 0 229 62 6 0 0 0 2.8672E-06 2 34098 96.067 84.855 1 1.1189 1.1581 0 23189000 8997200 14192000 13608 1803 5181 5307 21257;21258 21258 1668 GLSEAAGQTAQMLER 15 0 1 Oxidation (M) _GLSEAAGQTAQM(ox)LER_ GLSEAAGQTAQM(1)LER GLSEAAGQTAQM(142.1)LER 0 1 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.3864 2 789.383036 1576.75152 69540.93 0.6504 0.00051341 -0.63683 -0.0005027 0.013568 1.071E-05 789.382777226795 794.386945838959 60.75 0.76142 60.75 60.389 61.15 0 237 61 6 0 0 0 3.255E-22 2 34610 142.1 122.96 1 1.2353 1.2841 0 38026000 19643000 18384000 13609 1803 5181 5307 21259;21260 21260 1668 GLSEAAGQTAQMLER 15 0 1 Oxidation (M) _GLSEAAGQTAQM(ox)LER_ GLSEAAGQTAQM(1)LER GLSEAAGQTAQM(110.93)LER 0 1 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.3848 2 789.383036 1576.75152 69711.48 0.84839 0.0006697 -0.64266 -0.00050731 0.20572 0.00016239 789.382664090445 794.386821924664 59.012 0.61836 59.012 58.838 59.457 0 264 56 6 0 0 0 4.1769E-08 2 34274 110.93 103.37 1 0.9932 1.0879 0 31854000 17221000 14633000 13610 1803 5181 5307 21261;21262 21262 1668 GLSEAAGQTAQMLER 15 0 1 Oxidation (M) _GLSEAAGQTAQM(ox)LER_ GLSEAAGQTAQM(1)LER GLSEAAGQTAQM(173.76)LER 0 1 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.3872 2 789.383036 1576.75152 69307.23 0.77008 0.00060789 -0.5946 -0.00046937 0.17547 0.00013852 789.38282309866 794.386989592793 59.794 0.71665 59.794 59.435 60.152 0 309 60 8 0 0 0 2.2158E-39 2 34776 173.76 151.28 1 1.1641 1.2717 0 37674000 17076000 20598000 13611 1803 5181 5307 21263;21264 21264 1668 GLSEAAGQTAQMLER 15 0 1 Oxidation (M) _GLSEAAGQTAQM(ox)LER_ GLSEAAGQTAQM(1)LER GLSEAAGQTAQM(47.14)LER 0 1 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.384 2 789.383036 1576.75152 68866.04 0.33534 0.00026471 -0.0098267 -7.757E-06 0.32551 0.00025695 789.382911428275 794.38766143299 70.325 0.45271 70.325 70.088 70.541 0 132 30 7 0 0 0 0.00080217 1 36897 47.139 47.139 1 1.027 0.86308 0 4360300 2394600 1965600 13612 1803 5181 5307 21265 21265 1668 GLSEAAGQTAQMLER 15 0 1 Oxidation (M) _GLSEAAGQTAQM(ox)LER_ GLSEAAGQTAQM(1)LER GLSEAAGQTAQM(72.19)LER 0 1 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 794.3882 2 789.383036 1576.75152 68034.46 0.30927 0.00024413 -0.10682 -8.4325E-05 0.20245 0.00015981 789.3833137435 794.38763586959 70.951 0.54359 70.951 70.714 71.257 0 170 34 7 0 0 0 0.00010923 1 37343 72.187 62.865 1 1.0227 0.87505 0 5942100 3152400 2789700 13613 1803 5181 5307 21266 21266 1668 GLSEAAGQTAQMLER 15 0 1 Oxidation (M) _GLSEAAGQTAQM(ox)LER_ GLSEAAGQTAQM(1)LER GLSEAAGQTAQM(66.02)LER 0 1 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 794.388 2 789.383036 1576.75152 69591.74 0.20289 0.00016016 -0.030197 -2.3837E-05 0.17269 0.00013632 789.383327122082 794.3874826527 71.641 0.58475 71.641 71.339 71.923 0 190 38 7 0 0 0 0.0001073 2 36920 66.023 59.64 1 1.1141 0.9243 0 5241800 2161900 3079800 13614 1803 5181 5307 21267;21268 21267 1668 GLSEAAGQTAQMLER 15 0 1 Unmodified _GLSEAAGQTAQMLER_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 786.3902 2 781.385579 1560.75661 69454.1 0.86933 0.00067928 -0.65356 -0.00051069 0.21576 0.00016859 781.385147548543 786.389748401508 91.154 0.6812 91.154 90.747 91.429 0 207 42 8 0 0 0 2.3373E-15 2 50557 132.5 122.5 1 1.1465 0.98686 0 7457800 3435200 4022600 13615 1803 5181 5308 21269;21270 21270 GLSEAAGQTAQMLER 15 0 1 Unmodified _GLSEAAGQTAQMLER_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 786.3898 2 781.385579 1560.75661 69343.16 0.54878 0.00042881 -0.67107 -0.00052436 -0.12229 -9.5555E-05 781.385192274664 786.389695451335 91.009 0.59124 91.009 90.767 91.358 0 182 36 6 0 0 0 1.4833E-15 1 49751 134.49 108.55 1 1.1327 0.9427 0 7215300 3312300 3903000 13616 1803 5181 5308 21271 21271 GLSEDTTEETLK 12 1 0 Unmodified _GLSEDTTEETLK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.8203 2 661.819729 1321.62491 74401.21 0.7621 0.00050437 0.041411 2.7406E-05 0.80351 0.00053178 661.819764848365 665.826808866292 42.495 0.93455 42.495 42.178 43.112 3.8147E-06 472 73 10 0 0 0 6.123E-38 3 22740 183.67 183.67 1 1.182 1.3976 0 405630000 183550000 222090000 13617 151 5182 5309 21272;21273;21274 21274 GLSEDTTEETLK 12 1 0 Unmodified _GLSEDTTEETLK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.8212 2 661.819729 1321.62491 74234.95 0.63108 0.00041766 0.057424 3.8004E-05 0.6885 0.00045567 661.819720805271 665.826837852375 41.93 1.0101 41.93 41.476 42.486 0 553 88 9 0 0 0 2.9772E-18 2 22432 147.4 147.4 1 1.1098 1.306 0 396500000 182820000 213670000 13618 151 5182 5309 21275;21276 21276 GLSEDTTEETLK 12 1 0 Unmodified _GLSEDTTEETLK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.8197 2 661.819729 1321.62491 74106.7 0.50262 0.00033264 -0.035127 -2.3248E-05 0.46749 0.0003094 661.819792850656 665.826883838828 49.714 0.96381 49.714 49.261 50.225 0 440 75 8 0 0 0 0.00011875 2 24292 94.692 94.692 1 0.64686 0.52859 0 33889000 20101000 13788000 13619 151 5182 5309 21277;21278 21278 GLSEDTTEETLK 12 1 0 Unmodified _GLSEDTTEETLK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.8276 2 661.819729 1321.62491 75021.78 0.29652 0.00019624 0.1541 0.00010199 0.45062 0.00029823 661.819888538324 665.827006031797 50.119 1.5202 50.119 49.519 51.039 0 541 117 9 0 0 0 1.3679E-12 2 23900 128.91 128.91 1 0.60861 0.50172 0 29749000 17810000 11939000 13620 151 5182 5309 21279;21280 21280 GLSEDVSISK 10 1 0 Unmodified _GLSEDVSISK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;K7EP67 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.772 2 517.771854 1033.52915 85841.23 0.55805 0.00028894 0.12583 6.5152E-05 0.68388 0.00035409 517.771965195011 521.77890314051 47.555 0.66445 47.555 47.26 47.925 0 255 58 7 0 0 0 0.0024909 3 25746 68.846 45.418 1 0.95437 1.0554 0 57499000 29807000 27692000 13621 794 5183 5310 21281;21282;21283 21282 GLSEDVSISK 10 1 0 Unmodified _GLSEDVSISK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;K7EP67 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.7793 2 517.771854 1033.52915 83759.4 0.51302 0.00026563 0.24686 0.00012781 0.75988 0.00039344 517.772012202004 521.778973058708 46.475 0.60641 46.475 46.218 46.824 0 209 48 6 0 0 0 2.8565E-08 2 25610 120.15 73.729 1 1.0598 1.1842 0 91794000 49603000 42191000 13622 794 5183 5310 21284;21285 21285 GLSEDVSISK 10 1 0 Unmodified _GLSEDVSISK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;K7EP67 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.772 2 517.771854 1033.52915 84537.65 0.38628 0.00020001 0.13295 6.8837E-05 0.51923 0.00026884 517.771960310708 521.778969127608 54.917 0.54545 54.917 54.662 55.207 0 155 36 7 0 0 0 0.031518 1 27392 42.19 18.762 1 0.89607 0.70032 0 3821300 1905500 1915800 13623 794 5183 5310 21286 21286 GLSEDVSISK 10 1 0 Unmodified _GLSEDVSISK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;K7EP67 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.7788 2 517.771854 1033.52915 85115.72 0.20358 0.00010541 0.20955 0.0001085 0.41313 0.00021391 517.772072289296 521.778891221818 55.414 0.54839 55.414 55.148 55.697 0 133 29 6 0 0 0 0.0034095 2 27148 64.654 37.4 1 0.98494 0.79925 0 2833300 1391000 1442300 13624 794 5183 5310 21287;21288 21287 GLSFLEVK 8 1 0 Unmodified _GLSFLEVK_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.7674 2 446.760561 891.506569 89166.94 0.20686 9.2418E-05 0.33082 0.0001478 0.53768 0.00024021 446.76065750087 450.767949841298 90.097 0.62952 90.097 89.737 90.366 -7.6294E-06 150 50 4 0 0 0 0.034378 2 54199 49.442 26.295 1 0.8059 0.79353 0 24171000 13403000 10767000 13625 1927 5184 5311 21289;21290 21289 GLSFLEVK 8 1 0 Unmodified _GLSFLEVK_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.7693 2 446.760561 891.506569 90369.32 0.25544 0.00011412 0.31915 0.00014258 0.57459 0.0002567 446.760687862657 450.767980640779 88.887 0.64214 88.887 88.54 89.183 0 202 54 6 0 0 0 0.027047 2 54667 54.157 30.634 1 0.81289 0.82367 0 29340000 16346000 12994000 13626 1927 5184 5311 21291;21292 21291 GLSFLEVK 8 1 0 Unmodified _GLSFLEVK_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 450.7679 2 446.760561 891.506569 90801.38 0.065687 2.9346E-05 0.31035 0.00013865 0.37603 0.000168 446.760639128985 450.767769052264 102.97 0.72562 102.97 102.62 103.34 0 171 47 4 0 0 0 0.052409 1 58355 42.869 26.725 1 0.97137 0.7688 0 6234800 3115600 3119200 13627 1927 5184 5311 21293 21293 GLSFLEVK 8 1 0 Unmodified _GLSFLEVK_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 450.7681 2 446.760561 891.506569 91197.9 -0.066932 -2.9903E-05 0.43138 0.00019273 0.36445 0.00016282 446.760641818292 450.767882485564 102.71 0.77769 102.71 102.39 103.17 -7.6294E-06 198 49 6 0 0 0 0.052409 1 57306 42.869 24.545 1 1.1419 0.93186 0 6306000 3332700 2973300 13628 1927 5184 5311 21294 21294 GLSGAQDPFPGPAPVPVEVVQK 22 1 0 Unmodified _GLSGAQDPFPGPAPVPVEVVQK_ 0 0 0 B0UZZ8;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1 B0UZZ8 B0UZZ8 C6orf11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1099.0911 2 1095.08369 2188.15282 57638.38 0.48848 0.00053493 -0.3916 -0.00042884 0.096876 0.00010609 1095.58464121831 1099.59183426089 112 0.47245 112 111.79 112.27 0 245 33 10 0 0 0 7.4845E-09 2 70552 81.656 81.656 1 0.87372 0.96065 0 54414000 28368000 26047000 13629 809 5185 5312 21295;21296 21295 GLSGAQDPFPGPAPVPVEVVQK 22 1 0 Unmodified _GLSGAQDPFPGPAPVPVEVVQK_ 0 0 0 B0UZZ8;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1 B0UZZ8 B0UZZ8 C6orf11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1099.0901 2 1095.08369 2188.15282 57875.01 0.26055 0.00028532 -0.18063 -0.0001978 0.079919 8.7519E-05 1095.58475394426 1099.59204363313 111.47 0.45478 111.47 111.28 111.73 0 209 29 10 0 0 0 1.5702E-15 2 71859 101.42 101.42 1 0.93532 1.0546 0 61755000 34025000 27731000 13630 809 5185 5312 21297;21298 21297 GLSGAQDPFPGPAPVPVEVVQK 22 1 0 Unmodified _GLSGAQDPFPGPAPVPVEVVQK_ 0 0 0 B0UZZ8;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1 B0UZZ8 B0UZZ8 C6orf11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1099.5934 2 1095.08369 2188.15282 58731.88 0.34153 0.000374 -0.045526 -4.9855E-05 0.296 0.00032414 1095.58501815989 1099.59218953783 123.05 0.66542 123.05 122.74 123.41 0 240 30 12 0 0 0 1.1776E-08 2 73368 78.326 78.326 1 1.2782 1.0785 0 56498000 24923000 31575000 13631 809 5185 5312 21299;21300 21299 GLSGAQDPFPGPAPVPVEVVQK 22 1 0 Unmodified _GLSGAQDPFPGPAPVPVEVVQK_ 0 0 0 B0UZZ8;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1 B0UZZ8 B0UZZ8 C6orf11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1095.585 2 1095.08369 2188.15282 58260.16 0.38345 0.00041992 -0.037728 -4.1316E-05 0.34573 0.0003786 1095.58506822164 1099.59196086513 122.89 0.52763 122.89 122.61 123.14 0 229 25 13 0 0 0 1.3197E-08 2 72371 77.222 77.222 1 1.3006 1.1031 0 66799000 28499000 38300000 13632 809 5185 5312 21301;21302 21302 GLSHSPWAVK 10 1 0 Unmodified _GLSHSPWAVK_ 0 0 0 V9HWH0;Q96KB5;E5RFX4 V9HWH0 V9HWH0 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 361.1976 3 361.197819 1080.57163 NaN NaN NaN 0.072809 2.6298E-05 NaN NaN NaN NaN 39.855 0.31847 39.855 39.706 40.024 0 0 0 0 0.014698 1 20725 37.556 22.882 1 NaN NaN 0 4791400 4791400 0 13633 1975 5186 5313 21303 21303 GLSPAQADSQFLENAK 16 1 0 Unmodified _GLSPAQADSQFLENAK_ 0 0 0 Q59FD8;E9PII3;E9PK52;E9PHY5;O43491;I6L9B1 Q59FD8 Q59FD8 EPB41L2 Band 4.1-like protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.4244 2 838.417933 1674.82131 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.955 1 78.955 78.455 79.455 -7.6294E-06 0 0 0 4.0186E-05 1 47931 91.858 74.049 1 13634 1238 5187 5314 21304 21304 GLSQNQQIPQNSVTPR 16 0 1 Unmodified _GLSQNQQIPQNSVTPR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.9651 2 883.960831 1765.90711 64619.97 0.61516 0.00054378 -0.06614 -5.8465E-05 0.54902 0.00048531 884.461956643188 888.964919462454 47.735 0.57425 47.735 47.509 48.084 3.8147E-06 290 50 8 0 0 0 1.0942E-17 2 25828 132.79 99.565 1 1.1836 1.3158 0 74497000 33816000 40681000 13635 1945 5188 5315 21305;21306 21305 GLSQNQQIPQNSVTPR 16 0 1 Unmodified _GLSQNQQIPQNSVTPR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.9613 2 883.960831 1765.90711 64866.52 0.6868 0.0006071 0.14308 0.00012647 0.82988 0.00073358 884.462392559575 888.965099687511 46.623 0.57051 46.623 46.409 46.979 0 289 48 8 0 0 0 3.3007E-06 2 25680 89.629 73.74 1 1.1503 1.3378 0 60028000 30628000 29400000 13636 1945 5188 5315 21307;21308 21308 GLSQNQQIPQNSVTPR 16 0 1 Unmodified _GLSQNQQIPQNSVTPR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.9654 2 883.960831 1765.90711 64818.23 0.51298 0.00045345 0.048875 4.3204E-05 0.56185 0.00049665 883.960949171023 888.965060155553 55.664 0.93082 55.664 55.348 56.279 0 356 59 10 0 0 0 0.00015235 1 27817 65.593 59.56 1 1.7639 1.498 0 33573000 12409000 21163000 13637 1945 5188 5315 21309 21309 GLSQNQQIPQNSVTPR 16 0 1 Unmodified _GLSQNQQIPQNSVTPR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 889.4657 2 883.960831 1765.90711 64572.52 0.24549 0.000217 0.20441 0.00018069 0.4499 0.00039769 883.961128664958 888.965200005351 56.289 0.7284 56.289 55.926 56.654 0 369 50 11 0 0 0 0.00033821 1 27575 53.448 47.841 1 1.8423 1.6071 0 32004000 10944000 21060000 13638 1945 5188 5315 21310 21310 GLSQSALPYR 10 0 1 Unmodified _GLSQSALPYR_ 0 0 0 P62277;J3KMX5;E9PS50 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2971 2 546.29583 1090.57711 80165.41 0.43373 0.00023694 0.59669 0.00032597 1.0304 0.00056291 546.295848873169 551.300257314981 54.706 0.94162 54.706 54.408 55.349 -3.8147E-06 374 89 8 0 0 0 1.5728E-08 2 30674 122.74 58.175 1 1.0832 1.2518 0 160240000 66228000 94010000 13639 1640 5189 5316 21311;21312 21312 GLSQSALPYR 10 0 1 Unmodified _GLSQSALPYR_ 0 0 0 P62277;J3KMX5;E9PS50 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.2953 2 546.29583 1090.57711 79460.02 0.55993 0.00030589 0.4618 0.00025228 1.0217 0.00055817 546.295847179035 551.300165116026 53.812 0.97877 53.812 53.313 54.292 0 425 93 8 0 0 0 2.7065E-08 3 30565 120.46 59.775 1 1.1175 1.2809 0 174950000 82567000 92383000 13640 1640 5189 5316 21313;21314;21315 21313 GLSQSALPYR 10 0 1 Unmodified _GLSQSALPYR_ 0 0 0 P62277;J3KMX5;E9PS50 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.2961 2 546.29583 1090.57711 80392.14 0.26798 0.0001464 0.15543 8.4908E-05 0.42341 0.00023131 546.295533304668 551.299955944879 63.833 0.93398 63.833 63.296 64.23 0 353 81 6 0 0 0 0.033363 1 32688 41.448 25.786 1 0.76925 0.62749 0 14843000 8434100 6409200 13641 1640 5189 5316 21316 21316 GLSQSALPYR 10 0 1 Unmodified _GLSQSALPYR_ 0 0 0 P62277;J3KMX5;E9PS50 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.2952 2 546.29583 1090.57711 81297.64 0.26704 0.00014589 0.19231 0.00010506 0.45936 0.00025095 546.295610250291 551.299944159515 64.34 0.94566 64.34 63.87 64.816 0 363 78 7 0 0 0 0.0007117 2 32309 82.452 32.326 1 0.78513 0.63983 0 12662000 6737400 5925000 13642 1640 5189 5316 21317;21318 21318 GLSSEAVTSLLPK 13 1 0 Unmodified _GLSSEAVTSLLPK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.3688 2 651.369192 1300.72383 NaN NaN NaN -0.086944 -5.6633E-05 NaN NaN NaN NaN 115.8 0.43761 115.8 115.55 115.98 0 0 0 0 0.0088328 1 66926 56.359 37.579 1 NaN NaN 0 1396700 1396700 0 + 13643 1146 5190 5317 21319 21319 GLSSLLCNFTK 11 1 0 Unmodified _GLSSLLCNFTK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.3238 2 620.323731 1238.63291 78148.86 0.8274 0.00051325 0.022674 1.4065E-05 0.85007 0.00052732 620.323709912731 624.33079504736 108.97 0.58055 108.97 108.67 109.26 0 170 35 6 0 0 0 0.00013603 2 68113 95.573 76.793 1 0.58 0.57105 0 24135000 14824000 9310700 13644 1665 5191 5318 21320;21321 21320 GLSSLLCNFTK 11 1 0 Unmodified _GLSSLLCNFTK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.3235 2 620.323731 1238.63291 77919.09 0.5096 0.00031612 0.19687 0.00012212 0.70647 0.00043824 620.323767036857 624.331014350366 108.3 0.58263 108.3 108 108.59 0 165 39 5 0 0 0 0.00018263 2 69158 93.556 71.81 1 0.62775 0.66364 0 23614000 13267000 10346000 13645 1665 5191 5318 21322;21323 21322 GLSSLLCNFTK 11 1 0 Unmodified _GLSSLLCNFTK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.324 2 620.323731 1238.63291 74449.6 0.50674 0.00031434 -0.18105 -0.00011231 0.32569 0.00020203 620.323506238366 624.330376975932 120.59 0.6198 120.59 120.25 120.87 0 115 29 7 0 0 0 0.0048085 2 71572 57.348 35.262 1 0.36949 0.28717 0 12585000 8617400 3967500 13646 1665 5191 5318 21324;21325 21324 GLTAVSNNAGVDNFGLGLLLR 21 0 1 Unmodified _GLTAVSNNAGVDNFGLGLLLR_ 0 0 0 Q6IAV5;A0A024R040;P55809 Q6IAV5 Q6IAV5 OXCT;OXCT1 Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1056.5795 2 1051.07365 2100.13275 61914.72 0.96176 0.0010109 -0.48269 -0.00050735 0.47906 0.00050353 1051.57613175229 1056.57854398836 130.87 0.37051 130.87 130.58 130.95 0 63 23 6 0 0 0 2.9266E-08 1 85230 74.987 74.987 1 2.7805 2.8987 0 5093100 1803900 3289200 13647 35 5192 5319 21326 21326 GLTAVSNNAGVDNFGLGLLLR 21 0 1 Unmodified _GLTAVSNNAGVDNFGLGLLLR_ 0 0 0 Q6IAV5;A0A024R040;P55809 Q6IAV5 Q6IAV5 OXCT;OXCT1 Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1056.0771 2 1051.07365 2100.13275 NaN NaN NaN -0.62733 -0.00065937 NaN NaN NaN NaN 130.4 0.36446 130.4 130.21 130.58 0 0 0 0 1.1869E-08 1 87069 75.669 61.99 1 NaN NaN 0 4730200 0 4730200 13648 35 5192 5319 21327 21327 GLTDLSACK 9 1 0 Unmodified _GLTDLSACK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.7418 2 482.742042 963.469531 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.898 1 40.898 40.398 41.398 3.8147E-06 0 0 0 0.0030727 1 21927 76.478 46.293 1 13649 785 5193 5320 21328 21328 GLTDLSACK 9 1 0 Unmodified _GLTDLSACK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 482.7424 2 482.742042 963.469531 85458.18 -0.036109 -1.7431E-05 0.53845 0.00025993 0.50234 0.0002425 482.742207798288 486.749242398013 47.909 0.77234 47.909 47.61 48.382 -3.8147E-06 202 52 7 0 0 0 0.005135 2 23289 67.494 47.857 1 0.96703 0.76058 0 17288000 9425800 7862400 13650 785 5193 5320 21329;21330 21330 GLTDLSACK 9 1 0 Unmodified _GLTDLSACK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.7416 2 482.742042 963.469531 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.772 1 47.772 47.272 48.272 -3.8147E-06 0 0 0 0.039237 1 22660 50.04 24.303 1 13651 785 5193 5320 21331 21331 GLTETGLYR 9 0 1 Unmodified _GLTETGLYR_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;Q9BZ74;H0YIK5 B2RE34 B2RE34 RACGAP1;FKSG42 Rac GTPase-activating protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.2733 2 505.269281 1008.52401 86928.56 0.3298 0.00016664 -0.38467 -0.00019436 -0.054863 -2.7721E-05 505.269072632653 510.273053184473 58.353 0.71404 58.353 58.116 58.83 -3.8147E-06 165 54 5 0 0 0 0.021548 1 29016 49.418 35.839 1 2.1657 1.9543 0 2082600 767520 1315100 13652 68 5194 5321 21332 21332 GLTPSQIGVILR 12 0 1 Unmodified _GLTPSQIGVILR_ 0 0 0 P62277;J3KMX5 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.3874 2 627.382437 1252.75032 76001.18 0.61264 0.00038436 0.071912 4.5116E-05 0.68455 0.00042947 627.382419748474 632.386638149291 105.5 1.1917 105.5 105.1 106.29 0 523 87 9 0 0 0 0.00018811 2 65189 90.629 84.668 1 1.0997 1.3019 0 369410000 162540000 206870000 13653 1640 5195 5322 21333;21334 21333 GLTPSQIGVILR 12 0 1 Unmodified _GLTPSQIGVILR_ 0 0 0 P62277;J3KMX5 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3826 2 627.382437 1252.75032 75988.95 0.81938 0.00051407 0.03062 1.9211E-05 0.85 0.00053328 627.382451025115 632.386585977013 104.84 1.546 104.84 104.02 105.56 0 602 112 10 0 0 0 0.0032069 1 66231 56.632 48.828 1 1.1314 1.32 0 507510000 240610000 266890000 13654 1640 5195 5322 21335 21335 GLTPSQIGVILR 12 0 1 Unmodified _GLTPSQIGVILR_ 0 0 0 P62277;J3KMX5 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.3826 2 627.382437 1252.75032 76650.52 0.55355 0.00034729 0.1389 8.7142E-05 0.69245 0.00043443 627.382471702633 632.386615926471 117.37 0.67021 117.37 117.1 117.77 7.6294E-06 189 29 10 0 0 0 4.6852E-08 2 69051 114.84 105.94 1 0.82474 0.70919 0 46583000 25562000 21021000 13655 1640 5195 5322 21336;21337 21337 GLTPSQIGVILR 12 0 1 Unmodified _GLTPSQIGVILR_ 0 0 0 P62277;J3KMX5 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.387 2 627.382437 1252.75032 76701.84 0.61772 0.00038754 0.18889 0.00011851 0.80661 0.00050605 627.382519698311 632.386601416292 117.08 0.63737 117.08 116.86 117.49 7.6294E-06 193 28 9 0 0 0 8.0183E-06 2 67976 108.98 101.33 1 0.8229 0.7178 0 34258000 18486000 15772000 13656 1640 5195 5322 21338;21339 21339 GLVASLISVK 10 1 0 Unmodified _GLVASLISVK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.8159 2 493.815867 985.617182 85570.87 0.45734 0.00022584 0.25105 0.00012397 0.70839 0.00034982 493.815946661204 497.822940180085 98.019 1.0817 98.019 97.626 98.708 0 453 89 7 0 0 0 2.4698E-05 2 59846 99.802 72.066 1 0.84505 0.9776 0 229820000 124980000 104830000 13657 69 5196 5323 21340;21341 21341 GLVASLISVK 10 1 0 Unmodified _GLVASLISVK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.8169 2 493.815867 985.617182 85812.16 0.556 0.00027456 0.19641 9.699E-05 0.75241 0.00037155 493.815902119721 497.822917790033 97.223 1.0482 97.223 96.742 97.79 0 468 82 8 0 0 0 3.5718E-05 2 60599 99.442 82.046 1 0.8573 0.98294 0 166240000 92415000 73823000 13658 69 5196 5323 21342;21343 21343 GLVASLISVK 10 1 0 Unmodified _GLVASLISVK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.8168 2 493.815867 985.617182 85276.05 0.50649 0.00025012 0.21624 0.00010678 0.72273 0.0003569 493.815962110511 497.822939630748 111.29 0.83237 111.29 110.89 111.72 0 207 38 8 0 0 0 1.4776E-05 2 64383 101.64 86.493 1 1.9234 1.6251 0 57431000 21630000 35800000 13659 69 5196 5323 21344;21345 21345 GLVASLISVK 10 1 0 Unmodified _GLVASLISVK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.8162 2 493.815867 985.617182 85677.66 0.26462 0.00013068 0.10055 4.9655E-05 0.36518 0.00018033 493.815896387925 497.822913718788 111.1 0.866 111.1 110.66 111.53 7.6294E-06 229 42 8 0 0 0 0.0010698 2 63263 76.679 63.889 1 1.7557 1.4835 0 57419000 20938000 36481000 13660 69 5196 5323 21346;21347 21347 GLVAVITGGASGLGLATAER 20 0 1 Unmodified _GLVAVITGGASGLGLATAER_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.0175 2 907.012532 1812.01051 64984.89 0.58027 0.00052632 0.36793 0.00033371 0.9482 0.00086003 907.012625512506 912.017019058973 117.85 0.76027 117.85 117.6 118.36 7.6294E-06 251 45 10 0 0 0 1.3245E-40 2 75492 157.38 140.02 1 2.003 2.2136 0 57162000 19324000 37837000 13661 555 5197 5324 21348;21349 21348 GLVAVITGGASGLGLATAER 20 0 1 Unmodified _GLVAVITGGASGLGLATAER_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 912.0175 2 907.012532 1812.01051 64716.91 0.54074 0.00049046 0.16759 0.000152 0.70833 0.00064246 907.012607567359 912.016842185981 117.35 0.79392 117.35 117.13 117.92 0 242 50 8 0 0 0 1.9179E-78 2 76852 189.1 166.18 1 1.7818 2.0428 0 82269000 31095000 51174000 13662 555 5197 5324 21350;21351 21350 GLVAVITGGASGLGLATAER 20 0 1 Unmodified _GLVAVITGGASGLGLATAER_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 912.0172 2 907.012532 1812.01051 64342.67 0.52739 0.00047835 0.28952 0.0002626 0.81691 0.00074095 907.012716348334 912.017091820935 130.15 0.49167 130.15 129.9 130.39 0 162 23 10 0 0 0 4.7008E-06 1 78882 58.071 52.465 1 1.2547 1.0229 0 15108000 6680100 8428400 13663 555 5197 5324 21352 21352 GLVEDTLR 8 0 1 Unmodified _GLVEDTLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.7551 2 451.750724 901.486896 94265.34 -0.24175 -0.00010921 0.078841 3.5616E-05 -0.16291 -7.3595E-05 451.750530363566 456.754947439962 53.033 0.55084 53.033 52.687 53.237 0 109 46 4 0 0 0 0.019774 1 30207 58.917 30.811 1 1.498 1.5052 0 11149000 4464800 6684300 13664 1754 5198 5325 21353 21353 GLVGIGLFALAHAAFSAAQHR 21 0 1 Unmodified _GLVGIGLFALAHAAFSAAQHR_ 0 0 0 Q8N4V1 Q8N4V1 Q8N4V1 MMGT1 Membrane magnesium transporter 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.3914 3 703.056835 2106.14868 78808.98 1.0214 0.00071812 -0.58516 -0.0004114 0.43627 0.00030672 703.390398814635 706.393131389905 132.9 0.27696 132.9 132.72 133 1.5259E-05 29 15 5 0 0 0 0.016834 1 89104 19.868 19.868 1 0.29623 0.31888 0 3115300 2078100 1037300 13665 1909 5199 5326 21354 21354 GLVGNPLPSVR 11 0 1 Unmodified _GLVGNPLPSVR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.8315 2 554.827298 1107.64004 81797.3 0.94249 0.00052292 -0.41975 -0.00023289 0.52273 0.00029003 554.826906130512 559.830968517364 80.893 0.98369 80.893 80.279 81.263 0 415 83 9 0 0 0 0.0018103 2 48078 64.654 47.414 1 0.83485 0.96796 0 171680000 94319000 77359000 13666 897 5200 5327 21355;21356 21356 GLVGNPLPSVR 11 0 1 Unmodified _GLVGNPLPSVR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.8269 2 554.827298 1107.64004 80903.18 0.74733 0.00041464 -0.19707 -0.00010934 0.55026 0.0003053 554.827042365519 559.831117280474 79.737 0.97136 79.737 79.223 80.194 0 363 78 9 0 0 0 0.00038966 2 48383 82.287 65.047 1 0.85559 0.97824 0 156370000 81968000 74406000 13667 897 5200 5327 21357;21358 21357 GLVGNPLPSVR 11 0 1 Unmodified _GLVGNPLPSVR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.8276 2 554.827298 1107.64004 80070.48 0.45594 0.00025297 0.10501 5.8262E-05 0.56095 0.00031123 554.827479341038 559.831195136134 92.578 0.79251 92.578 92.151 92.944 0 212 43 8 0 0 0 0.025653 2 51409 41.117 28.08 1 1.1209 0.94704 0 29909000 13602000 16307000 13668 897 5200 5327 21359;21360 21359 GLVGNPLPSVR 11 0 1 Unmodified _GLVGNPLPSVR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.8305 2 554.827298 1107.64004 80870.39 0.38716 0.00021481 -0.13725 -7.6152E-05 0.24991 0.00013865 554.827196788357 559.831127524682 92.328 0.73293 92.328 91.971 92.703 0 229 38 8 0 0 0 0.010084 1 50480 49.06 32.857 1 1.2531 1.059 0 18031000 8142100 9888900 13669 897 5200 5327 21361 21361 GLVGPELHDR 10 0 1 Unmodified _GLVGPELHDR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 368.2007 3 364.864729 1091.57236 101419.1 0.26761 9.764E-05 -0.041334 -1.5081E-05 0.22627 8.2559E-05 364.864674900956 368.200699243715 37.132 0.57846 37.132 36.949 37.527 0 182 50 6 0 0 0 0.00091191 1 18838 57.348 49.423 1 1.7976 1.8389 0 26346000 8744100 17602000 13670 1754 5201 5328 21362 21362 GLVGPELHDR 10 0 1 Unmodified _GLVGPELHDR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.7927 2 546.793455 1091.57236 NaN NaN NaN -0.40195 -0.00021979 NaN NaN NaN NaN 37.145 0.43427 37.145 37.015 37.449 0 0 0 0 0.0029859 1 18861 78.334 32.617 1 NaN NaN 0 18733000 18733000 0 13671 1754 5201 5328 21363 21363 GLVLLRPPASLQYR 14 0 2 Unmodified _GLVLLRPPASLQYR_ 0 0 1 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.3196 3 528.319109 1581.9355 83219.95 0.53883 0.00028467 -0.053358 -2.819E-05 0.48547 0.00025648 528.653352369758 534.99133035296 97.485 1.1804 97.485 96.97 98.15 0 298 101 5 0 0 0 0.00072215 1 59409 51.211 51.211 1 0.29697 0.32284 0 46020000 33945000 12075000 13672 1965 5202 5329 21364 21364 GLVLLRPPASLQYR 14 0 2 Unmodified _GLVLLRPPASLQYR_ 0 0 1 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.319 3 528.319109 1581.9355 83276.38 0.58292 0.00030797 -0.29245 -0.00015451 0.29047 0.00015346 528.318926209384 534.991082787768 95.958 0.89346 95.958 95.644 96.537 7.6294E-06 262 76 7 0 0 0 0.00082054 2 59786 47.189 46.978 1 0.31957 0.36804 0 60801000 44178000 16623000 13673 1965 5202 5329 21365;21366 21365 GLVLLRPPASLQYR 14 0 2 Unmodified _GLVLLRPPASLQYR_ 0 0 1 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.3195 3 528.319109 1581.9355 82457.33 0.48096 0.0002541 -0.2408 -0.00012722 0.24016 0.00012688 528.653383000901 534.990929859601 109.71 0.6554 109.71 109.27 109.92 0 164 30 8 0 0 0 0.013354 1 63113 24.191 24.191 1 0.48689 0.4136 0 8030500 5879900 2150600 13674 1965 5202 5329 21367 21367 GLVLLRPPASLQYR 14 0 2 Unmodified _GLVLLRPPASLQYR_ 0 0 1 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 528.6537 3 528.319109 1581.9355 84156.98 0.55659 0.00029406 -0.19381 -0.00010239 0.36278 0.00019166 528.318883219866 534.991171040765 109.35 0.659 109.35 109.03 109.69 0 141 29 8 0 0 0 0.024109 2 61921 24.425 24.425 1 0.57264 0.51955 0 5676600 3599600 2077000 13675 1965 5202 5329 21368;21369 21368 GLVLVPTK 8 1 0 Unmodified _GLVLVPTK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.7807 2 413.773471 825.53239 95519 0.17973 7.4367E-05 -0.16361 -6.7698E-05 0.016117 6.6689E-06 413.773201051815 417.780485409218 71.042 0.8735 71.042 70.624 71.498 0 211 71 5 0 0 0 0.013465 2 41247 65.252 54.436 1 1.3216 1.3906 0 30622000 13335000 17287000 13676 2081 5203 5330 21370;21371 21371 GLVLVPTK 8 1 0 Unmodified _GLVLVPTK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.7735 2 413.773471 825.53239 95277.12 0.16957 7.0162E-05 -0.25082 -0.00010378 -0.08125 -3.3619E-05 413.773177628374 417.780425089596 69.768 1.2886 69.768 69.25 70.539 0 272 107 5 0 0 0 0.0088018 2 41359 77.058 62.476 1 1.2325 1.3023 0 35545000 17067000 18478000 13677 2081 5203 5330 21372;21373 21373 GLVQALQTK 9 1 0 Unmodified _GLVQALQTK_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.2984 2 479.290017 956.565481 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.432 1 54.432 53.932 54.932 3.8147E-06 0 0 0 0.01317 1 31110 60.589 34.133 1 13678 587 5204 5331 21374 21374 GLVSSDELAK 10 1 0 Unmodified _GLVSSDELAK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.7811 2 509.774396 1017.53424 87216.71 0.59921 0.00030546 -0.52566 -0.00026797 0.073547 3.7493E-05 509.773989104466 513.781469364633 46.606 0.43497 46.606 46.433 46.868 -3.8147E-06 150 36 6 0 0 0 4.4984E-05 1 25770 99.139 81.899 1 1.2235 1.3573 0 48181000 24493000 23688000 13679 523 5205 5332 21375 21375 GLVVDMDGFEEERK 14 1 1 Oxidation (M) _GLVVDM(ox)DGFEEERK_ GLVVDM(1)DGFEEERK GLVVDM(51.55)DGFEEERK 0 1 1 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.2674 3 547.259255 1638.75594 NaN NaN NaN -0.52204 -0.00028569 NaN NaN NaN NaN 56.728 0.75518 56.728 56.13 56.886 0 0 0 0 0.0015179 1 32020 51.546 38.669 1 NaN NaN 0 5119500 0 5119500 13680 1583 5206 5333 21376 21376 1366 GLYCYELDEK 10 1 0 Unmodified _GLYCYELDEK_ 0 0 0 CON__Q3ZBS7 CON__Q3ZBS7 CON__Q3ZBS7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.2886 2 645.289553 1288.56455 NaN NaN NaN -0.61127 -0.00039445 NaN NaN NaN NaN 67.103 0.58881 67.103 66.834 67.423 0 0 0 0 0.00032116 1 38704 92.062 79.535 1 NaN NaN 0 14820000 14820000 0 + 13681 1173 5207 5334 21377 21377 GLYCYELDEK 10 1 0 Unmodified _GLYCYELDEK_ 0 0 0 CON__Q3ZBS7 CON__Q3ZBS7 CON__Q3ZBS7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.2893 2 645.289553 1288.56455 NaN NaN NaN -0.59543 -0.00038423 NaN NaN NaN NaN 65.954 0.47282 65.954 65.726 66.199 0 0 0 0 0.0045454 1 38895 72.23 59.703 1 NaN NaN 0 21732000 21732000 0 + 13682 1173 5207 5334 21378 21378 GLYEDCSSCFQAMGK 15 1 0 Oxidation (M) _GLYEDCSSCFQAM(ox)GK_ GLYEDCSSCFQAM(1)GK GLYEDCSSCFQAM(91.94)GK 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.3549 2 884.852397 1767.69024 64665.69 0.22916 0.00020278 -0.17892 -0.00015831 0.050246 4.446E-05 885.854399991965 888.859895314965 52.992 0.47343 52.992 52.693 53.166 0 158 35 7 0 0 0 5.5254E-06 3 29477 91.937 91.937 1 1.384 1.388 0 26825000 8748300 18077000 13683 1194;1193 5208 5335 21379;21380;21381 21381 909 GLYEDCSSCFQAMGK 15 1 0 Oxidation (M) _GLYEDCSSCFQAM(ox)GK_ GLYEDCSSCFQAM(1)GK GLYEDCSSCFQAM(99.28)GK 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 884.8524 2 884.852397 1767.69024 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.806 1 52.806 52.306 53.306 0 0 0 0 2.6377E-07 1 29420 99.283 95.858 1 13684 1194;1193 5208 5335 21382 21382 909 GLYEDCSSCFQAMGK 15 1 0 Oxidation (M) _GLYEDCSSCFQAM(ox)GK_ GLYEDCSSCFQAM(1)GK GLYEDCSSCFQAM(88.6)GK 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.3539 2 884.852397 1767.69024 65807.52 0.52182 0.00046174 -0.3267 -0.00028908 0.19513 0.00017266 884.852583618022 888.859494598556 52.053 0.60887 52.053 51.721 52.33 0 226 46 7 0 0 0 7.6757E-06 2 29493 88.596 88.596 1 1.4973 1.5928 0 20670000 8718800 11951000 13685 1194;1193 5208 5335 21383;21384 21384 909 GLYEDCSSCFQAMGK 15 1 0 Oxidation (M) _GLYEDCSSCFQAM(ox)GK_ GLYEDCSSCFQAM(1)GK GLYEDCSSCFQAM(49.93)GK 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.8588 2 884.852397 1767.69024 64159.47 0.39854 0.00035265 -0.33484 -0.00029628 0.063696 5.6362E-05 884.852603952816 888.859274667251 61.907 0.63906 61.907 61.554 62.193 0 300 51 8 0 0 0 0.00038333 1 31642 49.934 49.934 1 1.1772 0.92876 0 5426800 2490600 2936200 13686 1194;1193 5208 5335 21385 21385 909 GLYPAPLK 8 1 0 Unmodified _GLYPAPLK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.7644 2 429.757821 857.501089 93895.46 -0.098062 -4.2143E-05 -0.25806 -0.0001109 -0.35612 -0.00015304 429.757737383021 433.764640345968 63.232 0.75294 63.232 62.893 63.646 -3.8147E-06 209 72 4 0 0 0 0.025086 1 36245 55.441 24.772 1 1.3312 1.377 0 17167000 8223800 8943200 13687 1228 5209 5336 21386 21386 GLYPAPLK 8 1 0 Unmodified _GLYPAPLK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.765 2 429.757821 857.501089 NaN NaN NaN -0.045555 -1.9577E-05 NaN NaN NaN NaN 61.698 0.6352 61.698 61.476 62.111 0 0 0 0 0.024367 1 36125 62.714 27.609 1 NaN NaN 0 15133000 0 15133000 13688 1228 5209 5336 21387 21387 GLYSDTELQQCLAAAQAASQHVFR 24 0 1 Unmodified _GLYSDTELQQCLAAAQAASQHVFR_ 0 0 0 Q9NQT4;M0R050 Q9NQT4 Q9NQT4 EXOSC5 Exosome complex component RRP46 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 892.103 3 888.766009 2663.2762 NaN NaN NaN -0.32943 -0.00029279 NaN NaN NaN NaN 128.23 0.42554 128.23 128.04 128.47 0 0 0 0 0.0015962 1 77412 34.474 27.281 1 NaN NaN 0 5136200 0 5136200 13689 2060 5210 5337 21388 21388 GMAAAGNYAWVNR 13 0 1 Oxidation (M) _GM(ox)AAAGNYAWVNR_ GM(1)AAAGNYAWVNR GM(64.84)AAAGNYAWVNR 0 1 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.8274 2 698.82496 1395.63537 74240.22 0.77456 0.00054128 0.060271 4.2119E-05 0.83483 0.0005834 698.825197664505 703.829149845738 51.603 0.39022 51.603 51.464 51.855 0 82 33 4 0 0 0 0.00015333 1 28535 64.841 60.686 1 1.4846 1.5611 0 11398000 3722600 7675900 13690 2137 5211 5338 21389 21389 1974 GMAAAGNYAWVNR 13 0 1 Oxidation (M) _GM(ox)AAAGNYAWVNR_ GM(1)AAAGNYAWVNR GM(96.33)AAAGNYAWVNR 0 1 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.9752 2 698.82496 1395.63537 76485.95 0.74141 0.00051812 0.31543 0.00022043 1.0568 0.00073854 698.825832364544 703.829208852808 50.39 0.37296 50.39 50.117 50.49 0 125 36 6 0 0 0 0.00012536 1 28387 96.331 96.331 1 1.431 1.5254 0 24526000 11659000 12866000 13691 2137 5211 5338 21390 21390 1974 GMAFLHTLEPLIPR 14 0 1 Oxidation (M) _GM(ox)AFLHTLEPLIPR_ GM(1)AFLHTLEPLIPR GM(57.14)AFLHTLEPLIPR 0 1 0 V9HWF0;A0A0A0MTH3;Q13418 V9HWF0 V9HWF0 HEL-S-28;ILK Integrin-linked protein kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.9659 3 537.628954 1609.86503 NaN NaN NaN -0.162 -8.7098E-05 NaN NaN NaN NaN 106.42 0.59694 106.42 106.19 106.79 0 0 0 0 0.0057803 1 67704 57.136 45.865 1 NaN NaN 0 3784200 0 3784200 13692 487 5212 5339 21391 21391 336 GMATCFAYGQTGSGK 15 1 0 Oxidation (M) _GM(ox)ATCFAYGQTGSGK_ GM(1)ATCFAYGQTGSGK GM(42.81)ATCFAYGQTGSGK 0 1 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.3298 2 776.331958 1550.64936 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.804 1 37.804 37.304 38.304 0 0 0 0 0.011991 1 19308 42.809 35.603 1 13693 804 5213 5340 21392 21392 646 GMFNSALEVAK 11 1 0 Oxidation (M) _GM(ox)FNSALEVAK_ GM(1)FNSALEVAK GM(96.33)FNSALEVAK 0 1 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.7961 2 591.794806 1181.57506 NaN NaN NaN 0.34298 0.00020297 NaN NaN NaN NaN 59.484 0.2655 59.484 59.348 59.613 0 0 0 0 2.2482E-05 1 33921 96.331 66.077 1 NaN NaN 0 15390000 15390000 0 13694 1742 5214 5341 21393 21393 1587 GMGEAVQEFVDK 12 1 0 Oxidation (M) _GM(ox)GEAVQEFVDK_ GM(1)GEAVQEFVDK GM(54.26)GEAVQEFVDK 0 1 0 Q05D78;F8W7U8;A0A024R395;P49959 Q05D78 Q05D78 MRE11A Double-strand break repair protein MRE11A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.3065 2 663.305735 1324.59692 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.64 1 54.64 54.14 55.14 3.8147E-06 0 0 0 0.0068665 1 31252 54.259 45.938 1 13695 131 5215 5342 21394 21394 112 GMLDPLEVHLLDFPNIVIK 19 1 0 Oxidation (M) _GM(ox)LDPLEVHLLDFPNIVIK_ GM(1)LDPLEVHLLDFPNIVIK GM(113.88)LDPLEVHLLDFPNIVIK 0 1 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.0721 3 727.065897 2178.17586 71597.13 0.34978 0.00025432 0.077086 5.6047E-05 0.42687 0.00031036 727.400287590195 730.07166271902 133.3 0.23001 133.3 133.16 133.39 0 27 6 9 0 0 0 3.7673E-17 2 87265 113.88 110.01 1 1.0462 1.1845 0 89341000 52712000 36629000 13696 1854 5216 5343 21395;21396 21395 1711 GMLDPLEVHLLDFPNIVIK 19 1 0 Oxidation (M) _GM(ox)LDPLEVHLLDFPNIVIK_ GM(1)LDPLEVHLLDFPNIVIK GM(111.59)LDPLEVHLLDFPNIVIK 0 1 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.7382 3 727.065897 2178.17586 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.29 1 133.29 132.79 133.79 0 0 0 0 1.1786E-15 1 89478 111.59 102.43 1 13697 1854 5216 5343 21397 21397 1711 GMPPGGGGEVVFSCPVR 17 0 1 Oxidation (M) _GM(ox)PPGGGGEVVFSCPVR_ GM(1)PPGGGGEVVFSCPVR GM(46.07)PPGGGGEVVFSCPVR 0 1 0 Q9Y2P8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.9078 2 859.903082 1717.79161 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.524 1 73.524 73.024 74.024 0 0 0 0 0.0038667 1 43130 46.069 37.34 1 13698 2125 5217 5344 21398 21398 1951 GMPPGGGGEVVFSCPVR 17 0 1 Oxidation (M) _GM(ox)PPGGGGEVVFSCPVR_ GM(1)PPGGGGEVVFSCPVR GM(45.79)PPGGGGEVVFSCPVR 0 1 0 Q9Y2P8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 864.9078 2 859.903082 1717.79161 69916.78 0.63097 0.00054257 -0.3562 -0.0003063 0.27477 0.00023627 859.902555921823 864.906818275743 72.557 0.26611 72.557 72.403 72.669 0 52 24 4 0 0 0 0.00035611 1 43510 45.79 39.757 1 0.92837 0.92378 0 11784000 6451900 5332100 13699 2125 5217 5344 21399 21399 1951 GMSVSDLADK 10 1 0 Oxidation (M) _GM(ox)SVSDLADK_ GM(1)SVSDLADK GM(47.71)SVSDLADK 0 1 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.7491 2 519.742239 1037.46993 NaN NaN NaN 3.0842 0.001603 NaN NaN NaN NaN 28.32 0.45141 28.32 27.99 28.441 0 0 0 0 0.014463 1 13324 47.706 30.32 1 NaN NaN 0 12187000 0 12187000 13700 1774;1029;1128 5218 5345 21400 21400 810 GMSVSDLADK 10 1 0 Oxidation (M) _GM(ox)SVSDLADK_ GM(1)SVSDLADK GM(49.06)SVSDLADK 0 1 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.7504 2 519.742239 1037.46993 NaN NaN NaN -0.37593 -0.00019539 NaN NaN NaN NaN 27.942 0.53592 27.942 27.576 28.111 0 0 0 0 0.012851 1 12985 49.06 38.194 1 NaN NaN 0 15762000 0 15762000 13701 1774;1029;1128 5218 5345 21401 21401 810 GMTLVTPLQLLLFASK 16 1 0 Oxidation (M) _GM(ox)TLVTPLQLLLFASK_ GM(1)TLVTPLQLLLFASK GM(100.38)TLVTPLQLLLFASK 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 875.4453 2 874.504966 1746.99538 63444.5 0.31985 0.00027971 1.0008 0.00087524 1.3207 0.001155 875.008709162667 878.514042330288 133.67 0.26308 133.67 133.5 133.77 0 13 4 5 0 0 0 1.0488E-08 1 87630 100.38 100.38 1 0.91143 0.91384 0 26805000 8725300 18080000 13702 1691 5219 5346 21402 21402 1511 GMTSESDSIGLTPGEK 16 1 0 Oxidation (M) _GM(ox)TSESDSIGLTPGEK_ GM(1)TSESDSIGLTPGEK GM(80.47)TSESDSIGLTPGEK 0 1 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.8801 2 812.872167 1623.72978 NaN NaN NaN -0.046619 -3.7895E-05 NaN NaN NaN NaN 47.747 0.38534 47.747 47.579 47.965 3.8147E-06 0 0 0 1.2485E-06 1 25923 80.469 64.929 1 NaN NaN 0 6077400 0 6077400 13703 1601 5220 5347 21403 21403 1385 GMTSESDSIGLTPGEK 16 1 0 Oxidation (M) _GM(ox)TSESDSIGLTPGEK_ GM(1)TSESDSIGLTPGEK GM(83.31)TSESDSIGLTPGEK 0 1 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.8794 2 812.872167 1623.72978 NaN NaN NaN -0.016489 -1.3403E-05 NaN NaN NaN NaN 46.634 0.34425 46.634 46.509 46.853 0 0 0 0 9.6773E-07 1 25740 83.314 77.211 1 NaN NaN 0 5977600 0 5977600 13704 1601 5220 5347 21404 21404 1385 GMVFGAPVPK 10 1 0 Oxidation (M) _GM(ox)VFGAPVPK_ GM(1)VFGAPVPK GM(53.17)VFGAPVPK 0 1 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7813 2 509.773145 1017.53174 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.166 1 60.166 59.666 60.666 0 0 0 0 0.010198 1 34328 53.166 39.365 1 13705 684 5221 5348 21405 21405 532 GMVFGAPVPK 10 1 0 Oxidation (M) _GM(ox)VFGAPVPK_ GM(1)VFGAPVPK GM(51.85)VFGAPVPK 0 1 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.7806 2 509.773145 1017.53174 NaN NaN NaN 0.56562 0.00028834 NaN NaN NaN NaN 58.827 0.20007 58.827 58.753 58.953 0 0 0 0 0.0095233 1 34256 51.854 42.909 1 NaN NaN 0 4117300 0 4117300 13706 684 5221 5348 21406 21406 532 GMVFSINLGFSDLTNK 16 1 0 Oxidation (M) _GM(ox)VFSINLGFSDLTNK_ GM(1)VFSINLGFSDLTNK GM(107.17)VFSINLGFSDLTNK 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 884.4487 2 879.940187 1757.86582 65609.66 0.8952 0.00078772 0.10093 8.8815E-05 0.99614 0.00087654 880.441849356821 883.947365476438 120.83 0.58961 120.83 120.52 121.11 0 288 42 10 0 0 0 4.7048E-09 2 77835 107.17 107.17 1 0.98963 1.0941 0 57386000 30232000 27154000 13707 2148 5222 5349 21407;21408 21408 1991 GMVFSINLGFSDLTNK 16 1 0 Oxidation (M) _GM(ox)VFSINLGFSDLTNK_ GM(1)VFSINLGFSDLTNK GM(116.51)VFSINLGFSDLTNK 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.9479 2 879.940187 1757.86582 65088.79 0.89741 0.00078967 -0.090735 -7.9842E-05 0.80667 0.00070982 879.940115827501 883.947369061108 120.34 0.59087 120.34 120.07 120.66 7.6294E-06 305 43 10 0 0 0 2.13E-12 2 79363 116.51 111.99 1 1.0991 1.2367 0 71177000 35277000 35900000 13708 2148 5222 5349 21409;21410 21409 1991 GMVFSINLGFSDLTNK 16 1 0 Oxidation (M) _GM(ox)VFSINLGFSDLTNK_ GM(1)VFSINLGFSDLTNK GM(69.6)VFSINLGFSDLTNK 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 879.9424 2 879.940187 1757.86582 64927.87 0.86599 0.00076202 -0.33856 -0.00029791 0.52743 0.00046411 879.94018135291 883.947211240808 133.24 0.78519 133.24 132.96 133.74 0 163 35 9 0 0 0 7.4671E-05 2 81161 69.602 55.444 1 0.61716 0.47964 0 15225000 9350400 5875000 13709 2148 5222 5349 21411;21412 21412 1991 GMVFSINLGFSDLTNK 16 1 0 Oxidation (M) _GM(ox)VFSINLGFSDLTNK_ GM(1)VFSINLGFSDLTNK GM(72.7)VFSINLGFSDLTNK 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 884.4475 2 879.940187 1757.86582 65544.55 0.7949 0.00069947 -1.0309 -0.0009071 -0.23597 -0.00020764 880.441926256059 884.447258325282 132.98 0.40491 132.98 132.81 133.21 0 120 19 10 0 0 0 7.5337E-05 1 79998 72.705 72.705 1 0.71178 0.58079 0 6185600 3572800 2612800 13710 2148 5222 5349 21413 21413 1991 GNAAWQEQLK 10 1 0 Unmodified _GNAAWQEQLK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.7993 2 572.790912 1143.56727 82614.07 0.85983 0.0004925 0.16152 9.2519E-05 1.0214 0.00058502 572.790968977128 576.798386288791 45.102 0.52896 45.102 44.872 45.401 0 142 46 6 0 0 0 5.2324E-06 1 24223 108.81 90.822 1 1.9685 1.9281 0 21899000 8458300 13441000 13711 1454 5223 5350 21414 21414 GNAAWQEQLK 10 1 0 Unmodified _GNAAWQEQLK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.798 2 572.790912 1143.56727 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.215 1 44.215 43.715 44.715 0 0 0 0 0.00029646 1 24129 76.827 46.642 1 13712 1454 5223 5350 21415 21415 GNAGQSNYGFANSAMER 17 0 1 Oxidation (M) _GNAGQSNYGFANSAM(ox)ER_ GNAGQSNYGFANSAM(1)ER GNAGQSNYGFANSAM(88.55)ER 0 1 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.8864 2 895.381556 1788.74856 NaN NaN NaN -0.17421 -0.00015598 NaN NaN NaN NaN 37.228 0.34613 37.228 37.044 37.39 0 0 0 0 1.5825E-07 2 18883 88.552 79.364 1 NaN NaN 0 3549300 0 3549300 13713 587 5224 5351 21416;21417 21417 438 GNAGQSNYGFANSAMER 17 0 1 Oxidation (M) _GNAGQSNYGFANSAM(ox)ER_ GNAGQSNYGFANSAM(1)ER GNAGQSNYGFANSAM(74.99)ER 0 1 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.8859 2 895.381556 1788.74856 NaN NaN NaN -0.17123 -0.00015332 NaN NaN NaN NaN 36.296 0.3147 36.296 36.131 36.446 0 0 0 0 1.488E-05 2 18651 74.987 68.884 1 NaN NaN 0 4560800 0 4560800 13714 587 5224 5351 21418;21419 21419 438 GNAIYNLLPDIISR 14 0 1 Unmodified _GNAIYNLLPDIISR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.9373 2 779.933022 1557.85149 68525.41 1.1189 0.00087269 -0.094449 -7.3664E-05 1.0245 0.00079902 779.932999073759 784.93708648975 126.73 0.86668 126.73 126.42 127.29 0 388 55 11 0 0 0 1.5283E-09 2 82366 119.74 119.74 1 0.85676 1.0043 0 215080000 116230000 98854000 13715 908 5225 5352 21420;21421 21421 GNAIYNLLPDIISR 14 0 1 Unmodified _GNAIYNLLPDIISR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.9375 2 779.933022 1557.85149 69240.29 0.94076 0.00073373 0.097059 7.57E-05 1.0378 0.00080943 779.933209987493 784.937186541163 126.34 0.84814 126.34 125.99 126.84 0 388 52 11 0 0 0 1.2566E-29 2 84089 155.48 155.48 1 0.86703 1.0038 0 279170000 149190000 129980000 13716 908 5225 5352 21422;21423 21423 GNDTFVTLDEILR 13 0 1 Unmodified _GNDTFVTLDEILR_ 0 0 0 Q05D78;F8W7U8;A0A024R395;P49959;Q9BS79;F5GXT0;F5H742;A0A0S2Z438;F5H256 Q05D78 Q05D78 MRE11A Double-strand break repair protein MRE11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.3865 2 746.885738 1491.75692 70704.15 0.93525 0.00069852 -0.32828 -0.00024519 0.60696 0.00045333 746.885586758693 751.889951633071 121.43 0.55555 121.43 121.25 121.81 0 160 35 7 0 0 0 2.3956E-05 2 78451 98.898 98.898 1 0.69966 0.7192 0 25302000 14461000 10841000 13717 131 5226 5353 21424;21425 21425 GNDTFVTLDEILR 13 0 1 Unmodified _GNDTFVTLDEILR_ 0 0 0 Q05D78;F8W7U8;A0A024R395;P49959;Q9BS79;F5GXT0;F5H742;A0A0S2Z438;F5H256 Q05D78 Q05D78 MRE11A Double-strand break repair protein MRE11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.891 2 746.885738 1491.75692 69851.73 0.70665 0.00052779 -0.37527 -0.00028028 0.33138 0.0002475 747.386475090592 751.890031929613 121.01 0.53669 121.01 120.79 121.32 -7.6294E-06 139 32 7 0 0 0 0.00012898 2 79963 73.951 69.011 1 0.71833 0.74242 0 21638000 11255000 10384000 13718 131 5226 5353 21426;21427 21427 GNDTFVTLDEILR 13 0 1 Unmodified _GNDTFVTLDEILR_ 0 0 0 Q05D78;F8W7U8;A0A024R395;P49959;Q9BS79;F5GXT0;F5H742;A0A0S2Z438;F5H256 Q05D78 Q05D78 MRE11A Double-strand break repair protein MRE11A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.3895 2 746.885738 1491.75692 71739.33 1.154 0.00086187 -0.68732 -0.00051335 0.46664 0.00034853 746.885333821089 751.889290088885 134.01 0.35159 134.01 133.81 134.16 0 66 14 6 0 0 0 0.00012265 2 81666 77.593 73.671 1 0.48202 0.41162 0 5725600 3784900 1940700 13719 131 5226 5353 21428;21429 21428 GNEEAQIFRPLK 12 1 1 Unmodified _GNEEAQIFRPLK_ 0 0 1 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.3798 2 701.377883 1400.74121 72309.58 0.6029 0.00042286 -0.39862 -0.00027958 0.20429 0.00014328 701.377809773569 710.389080978121 62.345 0.61617 62.345 61.981 62.597 3.8147E-06 201 53 6 0 0 0 0.0010126 2 35924 89.9 75.898 1 1.022 1.2238 0 57016000 29528000 27489000 13720 794 5227 5354 21430;21431 21431 GNEEAQIFRPLK 12 1 1 Unmodified _GNEEAQIFRPLK_ 0 0 1 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.3884 2 701.377883 1400.74121 74024.32 0.64696 0.00045376 -0.43781 -0.00030707 0.20915 0.00014669 701.377410079419 710.389229005904 60.432 0.69469 60.432 59.896 60.59 0 147 44 9 0 0 0 0.0035482 1 35249 67.726 67.726 1 1.0045 1.1783 0 57850000 29327000 28523000 13721 794 5227 5354 21432 21432 GNEFFCEVDEDYIQDK 16 1 0 Unmodified _GNEFFCEVDEDYIQDK_ 0 0 0 N0E4C7;Q5SRQ6;P67870;N0E466;Q5SRQ3;N0E472;A0A0G2JM12;N0E650;N0E638;N0E6J1;B4DUJ4;N0E644;A0A0G2JM58 N0E4C7 N0E4C7 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991;CSNK2B-LY6G5B-1072;CSNK2B-LY6G5B-560;CSNK2B-LY6G5B-562 Casein kinase II subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1008.9266 2 1004.41747 2006.82039 62512.93 0.53646 0.00053883 -0.19302 -0.00019387 0.34344 0.00034496 1004.91858014703 1008.42425076247 101.28 0.47428 101.28 101.03 101.5 0 140 37 6 0 0 0 0.00015387 1 62121 69.03 69.03 1 0.99915 1.0425 0 11771000 6471000 5299600 13722 1358 5228 5355 21433 21433 GNEFFCEVDEDYIQDK 16 1 0 Unmodified _GNEFFCEVDEDYIQDK_ 0 0 0 N0E4C7;Q5SRQ6;P67870;N0E466;Q5SRQ3;N0E472;A0A0G2JM12;N0E650;N0E638;N0E6J1;B4DUJ4;N0E644;A0A0G2JM58 N0E4C7 N0E4C7 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991;CSNK2B-LY6G5B-1072;CSNK2B-LY6G5B-560;CSNK2B-LY6G5B-562 Casein kinase II subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1004.4165 2 1004.41747 2006.82039 62896.68 0.438 0.00043993 -0.15568 -0.00015637 0.28231 0.00028356 1004.91868071262 1008.42431791434 100.6 0.48067 100.6 100.38 100.86 -7.6294E-06 174 39 6 0 0 0 1.7701E-08 5 63206 102.62 102.62 1 1.0249 1.0368 0 13080000 6162700 6917400 13723 1358 5228 5355 21434;21435;21436;21437;21438 21437 GNEFFCEVDEDYIQDK 16 1 0 Unmodified _GNEFFCEVDEDYIQDK_ 0 0 0 N0E4C7;Q5SRQ6;P67870;N0E466;Q5SRQ3;N0E472;A0A0G2JM12;N0E650;N0E638;N0E6J1;B4DUJ4;N0E644;A0A0G2JM58 N0E4C7 N0E4C7 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991;CSNK2B-LY6G5B-1072;CSNK2B-LY6G5B-560;CSNK2B-LY6G5B-562 Casein kinase II subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1004.9206 2 1004.41747 2006.82039 62077 0.72486 0.00072806 0.048569 4.8783E-05 0.77343 0.00077684 1004.41793743294 1008.42387524506 113.53 0.44223 113.53 113.32 113.76 -7.6294E-06 110 21 8 0 0 0 0.0016086 1 66114 44.457 44.457 1 0.49583 0.3933 0 4553500 2965400 1588000 13724 1358 5228 5355 21439 21439 GNENANGAPAITLLIR 16 0 1 Unmodified _GNENANGAPAITLLIR_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.4449 2 812.444286 1622.87402 68310.4 0.8478 0.00068879 -0.1797 -0.00014599 0.6681 0.0005428 812.444207761267 817.448193084447 109.29 0.97973 109.29 108.69 109.67 0 343 58 9 0 0 0 7.6391E-05 1 68186 81.431 72.243 1 0.6537 0.73387 0 92974000 55393000 37582000 13725 2148 5229 5356 21440 21440 GNENANGAPAITLLIR 16 0 1 Unmodified _GNENANGAPAITLLIR_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.4455 2 812.444286 1622.87402 68419.8 0.60964 0.0004953 -0.34357 -0.00027913 0.26607 0.00021617 812.444095743337 817.448176655981 108.63 0.86086 108.63 108.12 108.98 0 360 59 10 0 0 0 2.2354E-12 2 69388 120.84 111.88 1 0.66759 0.76024 0 107850000 64274000 43573000 13726 2148 5229 5356 21441;21442 21441 GNENANGAPAITLLIR 16 0 1 Unmodified _GNENANGAPAITLLIR_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.4449 2 812.444286 1622.87402 67980.47 0.72093 0.00058571 -0.34974 -0.00028414 0.37119 0.00030157 812.443401753579 817.448290206482 120.77 0.51108 120.77 120.5 121.01 7.6294E-06 167 23 10 0 0 0 2.244E-06 3 71721 92.99 89.669 1 0.84368 0.71892 0 36263000 19359000 16904000 13727 2148 5229 5356 21443;21444;21445 21444 GNENANGAPAITLLIR 16 0 1 Unmodified _GNENANGAPAITLLIR_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 812.4449 2 812.444286 1622.87402 67847.96 0.8486 0.00068944 -0.25306 -0.00020559 0.59554 0.00048385 812.443718762441 817.448332804817 120.54 0.61121 120.54 120.22 120.83 0 226 32 10 0 0 0 1.1846E-08 3 70610 105.95 96.997 1 0.95472 0.83276 0 39311000 19771000 19540000 13728 2148 5229 5356 21446;21447;21448 21447 GNFGGSFAGSFGGAGGHAPGVAR 23 0 1 Unmodified _GNFGGSFAGSFGGAGGHAPGVAR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.3252 3 678.98915 2033.94562 72522.66 0.37721 0.00025612 -0.18311 -0.00012433 0.1941 0.00013179 679.323410620343 682.325266609121 74.521 0.99569 74.521 74.135 75.13 0 555 81 10 0 0 0 2.2873E-12 2 43543 90.464 90.464 1 1.3603 1.5873 0 195970000 85818000 110150000 13729 1599 5230 5357 21449;21450 21449 GNFGGSFAGSFGGAGGHAPGVAR 23 0 1 Unmodified _GNFGGSFAGSFGGAGGHAPGVAR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1022.985 2 1017.98009 2033.94562 61804.16 0.10257 0.00010441 0.41588 0.00042336 0.51845 0.00052777 1017.98033165069 1022.98515470044 74.481 0.63354 74.481 74.199 74.833 0 230 51 8 0 0 0 9.0669E-08 4 43606 73.834 61.669 1 1.5099 1.5347 0 29428000 12976000 16451000 13730 1599 5230 5357 21451;21452;21453;21454 21451 GNFGGSFAGSFGGAGGHAPGVAR 23 0 1 Unmodified _GNFGGSFAGSFGGAGGHAPGVAR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.3254 3 678.98915 2033.94562 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.06 1 75.06 74.56 75.56 0 0 0 0 2.6499E-05 1 44097 64.422 60.445 1 13731 1599 5230 5357 21455 21455 GNFGGSFAGSFGGAGGHAPGVAR 23 0 1 Unmodified _GNFGGSFAGSFGGAGGHAPGVAR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.3263 3 678.98915 2033.94562 72692.3 0.78362 0.00053207 -0.13578 -9.2192E-05 0.64784 0.00043987 679.323296190895 682.325150175603 73.091 1.0184 73.091 72.669 73.687 0 515 86 9 0 0 0 9.5261E-18 3 43731 111.66 111.66 1 1.3646 1.574 0 234760000 103640000 131120000 13732 1599 5230 5357 21456;21457;21458 21457 GNFGGSFAGSFGGAGGHAPGVAR 23 0 1 Unmodified _GNFGGSFAGSFGGAGGHAPGVAR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1018.4819 2 1017.98009 2033.94562 61146.79 0.53028 0.00053981 0.0020079 2.044E-06 0.53228 0.00054185 1017.98032079301 1022.98419075449 73.089 0.45976 73.089 72.889 73.349 0 182 37 7 0 0 0 3.1411E-09 2 43789 99.566 87.401 1 1.3784 1.5081 0 33924000 16279000 17645000 13733 1599 5230 5357 21459;21460 21459 GNFGGSFAGSFGGAGGHAPGVAR 23 0 1 Unmodified _GNFGGSFAGSFGGAGGHAPGVAR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1022.9836 2 1017.98009 2033.94562 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.881 1 72.881 72.381 73.381 0 0 0 0 0.0036755 1 43743 43.69 36.488 1 13734 1599 5230 5357 21461 21461 GNFGGSFAGSFGGAGGHAPGVAR 23 0 1 Unmodified _GNFGGSFAGSFGGAGGHAPGVAR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.3259 3 678.98915 2033.94562 72871 0.5552 0.00037698 -0.14802 -0.0001005 0.40719 0.00027647 679.323405063032 682.325206318193 85.299 0.86695 85.299 85.058 85.925 0 357 54 12 0 0 0 1.3648E-09 3 46550 74.048 74.048 1 0.98911 0.84003 0 33616000 16646000 16970000 13735 1599 5230 5357 21462;21463;21464 21463 GNFGGSFAGSFGGAGGHAPGVAR 23 0 1 Unmodified _GNFGGSFAGSFGGAGGHAPGVAR_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.3242 3 678.98915 2033.94562 72958.34 0.6781 0.00046042 0.11453 7.7768E-05 0.79263 0.00053819 679.323582641793 682.325386861576 85.38 0.92609 85.38 85.1 86.026 0 336 57 11 0 0 0 3.0033E-08 2 45790 56.247 56.247 1 0.99554 0.86843 0 27211000 13739000 13472000 13736 1599 5230 5357 21465;21466 21466 GNFLEIK 7 1 0 Unmodified _GNFLEIK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.457 1 820.45633 819.449054 NaN NaN NaN 0.5656 0.00046405 NaN NaN NaN NaN 68.158 0.5975 68.158 68.014 68.612 0 0 0 0 0.053123 1 39446 72.789 20.153 1 NaN NaN 0 5929100 5929100 0 13737 515 5231 5358 21467 21467 GNFYEASDWFK 11 1 0 Unmodified _GNFYEASDWFK_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.3018 2 682.30131 1362.58807 75684.55 0.6577 0.00044875 0.43718 0.00029829 1.0949 0.00074704 682.301445321248 686.308579920948 101.57 0.7188 101.57 101.23 101.95 0 180 55 5 0 0 0 0.0057959 1 62350 55.567 54.518 1 1.4725 1.4517 0 9209600 4428600 4780900 13738 765 5232 5359 21468 21468 GNFYEASDWFK 11 1 0 Unmodified _GNFYEASDWFK_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3089 2 682.30131 1362.58807 76104.52 0.50839 0.00034687 0.2966 0.00020237 0.80499 0.00054924 682.301288143442 686.308441570961 100.83 0.64126 100.83 100.48 101.12 0 207 50 6 0 0 0 0.0014119 2 63380 67.704 67.704 1 1.477 1.5302 0 11306000 4773800 6532700 13739 765 5232 5359 21469;21470 21470 GNGQPVQLQVVWQR 14 0 1 Unmodified _GNGQPVQLQVVWQR_ 0 0 0 Q01780;B4DKG8;B4DFE4 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 810.4393 2 804.933888 1607.85322 71127.83 0.48415 0.00038971 0.42598 0.00034288 0.91013 0.00073259 804.934368979549 809.938115720036 104.8 0.48514 104.8 104.57 105.05 0 91 26 5 0 0 0 0.034054 2 58810 39.918 39.918 1 0.92931 0.8098 0 1491900 687550 804370 13740 1676 5233 5360 21471;21472 21471 GNIAQMYHAPGK 12 1 0 Oxidation (M) _GNIAQM(ox)YHAPGK_ GNIAQM(1)YHAPGK GNIAQM(93.11)YHAPGK 0 1 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8181 2 651.816604 1301.61866 73277.05 0.4335 0.00028256 -0.96267 -0.00062748 -0.52917 -0.00034492 651.815530201878 655.822888457715 24.701 0.54281 24.701 24.42 24.962 0 77 24 5 0 0 0 7.0614E-05 2 10403 93.111 85.461 1 1.2194 1.2635 0 14763000 6470300 8293000 13741 1756 5234 5361 21473;21474 21474 1624 GNIAQMYHAPGK 12 1 0 Oxidation (M) _GNIAQM(ox)YHAPGK_ GNIAQM(1)YHAPGK GNIAQM(53.33)YHAPGK 0 1 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8163 2 651.816604 1301.61866 74046.37 0.58622 0.00038211 -0.85862 -0.00055966 -0.2724 -0.00017755 651.815481150181 655.823440817933 24.494 0.66142 24.494 24.196 24.857 -1.9073E-06 117 30 7 0 0 0 0.002182 1 10194 53.327 48.876 1 1.1278 1.1628 0 25118000 11762000 13357000 13742 1756 5234 5361 21475 21475 1624 GNIAQMYHAPGK 12 1 0 Oxidation (M) _GNIAQM(ox)YHAPGK_ GNIAQM(1)YHAPGK GNIAQM(40.72)YHAPGK 0 1 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.8245 2 651.816604 1301.61866 77245.21 0.31942 0.0002082 -0.4628 -0.00030166 -0.14338 -9.3459E-05 651.816276012251 655.824062297451 27.215 0.27839 27.215 27.068 27.346 -1.9073E-06 43 10 6 0 0 0 0.0089703 1 10013 40.724 40.724 1 0.84921 0.74622 0 1098500 617720 480770 13743 1756 5234 5361 21476 21476 1624 GNIAQMYHAPGK 12 1 0 Unmodified _GNIAQMYHAPGK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.8268 2 643.819147 1285.62374 76353.62 0.30443 0.000196 0.04488 2.8894E-05 0.34931 0.00022489 643.819164433839 647.826441882117 41.842 0.43552 41.842 41.592 42.028 3.8147E-06 111 33 6 0 0 0 0.016208 1 18882 42.348 38.194 1 1.529 1.3313 0 1335200 582260 752930 13744 1756 5234 5362 21477 21477 GNIIISTPEK 10 1 0 Unmodified _GNIIISTPEK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.3144 2 536.305864 1070.59717 83652.77 0.58401 0.00031321 -0.6064 -0.00032521 -0.022391 -1.2009E-05 536.305525075435 540.312890242927 53.686 0.84449 53.686 53.166 54.01 -3.8147E-06 246 65 5 0 0 0 0.011008 1 29899 52.579 39.542 1 1.0895 1.192 0 51741000 23605000 28136000 13745 1411 5235 5363 21478 21478 GNIIISTPEK 10 1 0 Unmodified _GNIIISTPEK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.306 2 536.305864 1070.59717 83439.88 0.74655 0.00040038 -0.70011 -0.00037547 0.046437 2.4904E-05 536.30564622773 540.312886974842 52.448 0.84513 52.448 51.938 52.783 0 291 63 6 0 0 0 0.0015966 2 29889 72.928 64.065 1 1.111 1.2513 0 69332000 32491000 36842000 13746 1411 5235 5363 21479;21480 21480 GNIIISTPEK 10 1 0 Unmodified _GNIIISTPEK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.3051 2 536.305864 1070.59717 84712.23 0.47409 0.00025426 0.11387 6.1067E-05 0.58795 0.00031532 536.305833079876 540.31311672695 61.492 0.77665 61.492 61.215 61.992 0 207 63 6 0 0 0 0.020014 1 31441 46.819 37.956 1 0.95817 0.75133 0 3907700 1913400 1994300 13747 1411 5235 5363 21481 21481 GNIIISTPEK 10 1 0 Unmodified _GNIIISTPEK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.3127 2 536.305864 1070.59717 83874.79 0.37816 0.00020281 -1.2269 -0.000658 -0.84876 -0.00045519 536.305825148089 540.312962016589 61.968 0.71553 61.968 61.668 62.384 3.8147E-06 227 52 6 0 0 0 0.03101 2 31014 42.395 33.532 1 1.0966 0.88998 0 2843300 1200300 1643000 13748 1411 5235 5363 21482;21483 21482 GNILIPGLSQK 11 1 0 Unmodified _GNILIPGLSQK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.3431 2 570.342781 1138.67101 81084.7 1.0954 0.00062473 -0.077186 -4.4022E-05 1.0182 0.0005807 570.342654364192 574.349803318646 91.059 0.83797 91.059 90.8 91.637 0 240 66 6 0 0 0 0.00099342 1 55244 70.908 64.318 1 0.84365 0.90835 0 33437000 18623000 14815000 13749 1745 5236 5364 21484 21484 GNILIPGLSQK 11 1 0 Unmodified _GNILIPGLSQK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.3425 2 570.342781 1138.67101 80333.38 0.93447 0.00053297 -0.34085 -0.0001944 0.59362 0.00033857 570.342558315988 574.349729201662 90.245 0.77895 90.245 89.89 90.669 0 306 68 5 0 0 0 0.0045094 2 55723 57.888 51.219 1 0.79506 0.85477 0 37563000 20021000 17542000 13750 1745 5236 5364 21485;21486 21485 GNILIPGLSQK 11 1 0 Unmodified _GNILIPGLSQK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.3436 2 570.342781 1138.67101 79687.09 0.53289 0.00030393 -0.37775 -0.00021545 0.15514 8.8485E-05 570.342833902525 574.349888414983 104.48 0.80981 104.48 104.04 104.85 0 249 51 7 0 0 0 0.011983 1 59360 48.091 44.978 1 1.3348 1.0553 0 6138800 2715400 3423400 13751 1745 5236 5364 21487 21487 GNILIPGLSQK 11 1 0 Unmodified _GNILIPGLSQK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.3428 2 570.342781 1138.67101 78720.16 0.35001 0.00019963 -0.21529 -0.00012279 0.13472 7.6836E-05 570.34290019576 574.349956524113 104.25 0.83773 104.25 103.79 104.63 -7.6294E-06 253 53 7 0 0 0 0.0063655 2 58347 54.539 51.131 1 1.32 1.079 0 5569700 2388900 3180800 13752 1745 5236 5364 21488;21489 21488 GNIVFVTLR 9 0 1 Unmodified _GNIVFVTLR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.8067 2 509.805834 1017.59712 84645.22 0.56134 0.00028618 0.46921 0.00023921 1.0306 0.00052538 509.806004306338 514.810176922674 95.51 1.0658 95.51 94.991 96.057 0 387 85 6 0 0 0 0.0040155 1 57888 70.332 54.67 1 0.90517 1.0056 0 72285000 38997000 33288000 13753 1827 5237 5365 21490 21490 GNIVFVTLR 9 0 1 Unmodified _GNIVFVTLR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.8104 2 509.805834 1017.59712 84438.96 0.62844 0.00032038 0.88162 0.00044945 1.5101 0.00076984 509.806144903867 514.810414571799 94.41 1.2226 94.41 93.854 95.076 0 409 103 6 0 0 0 0.011904 2 58382 57.96 45.284 1 0.91229 1.0557 0 67907000 35422000 32484000 13754 1827 5237 5365 21491;21492 21491 GNIVFVTLR 9 0 1 Unmodified _GNIVFVTLR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.8059 2 509.805834 1017.59712 84531.71 0.61473 0.00031339 0.10025 5.1106E-05 0.71498 0.0003645 509.805860267218 514.809877542213 108.57 0.79866 108.57 108.25 109.05 0 198 37 8 0 0 0 0.010363 1 62302 59.35 48.64 1 1.2168 1.0185 0 24690000 11300000 13390000 13755 1827 5237 5365 21493 21493 GNIVFVTLR 9 0 1 Unmodified _GNIVFVTLR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.8103 2 509.805834 1017.59712 85106.57 0.43603 0.00022229 0.11381 5.8019E-05 0.54984 0.00028031 509.805863467522 514.809890265106 108.36 0.80721 108.36 108.04 108.85 -7.6294E-06 201 40 8 0 0 0 0.018227 2 61188 52.255 39.218 1 1.1753 0.99852 0 19097000 8289600 10808000 13756 1827 5237 5365 21494;21495 21494 GNLGAGNGNLQGPR 14 0 1 Unmodified _GNLGAGNGNLQGPR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;D6RBI2;D6RE02;D6RIA2;D6RAM9;D6RAY2 D6REM6 D6REM6 MATR3;DKFZp686K0542 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8447 2 662.839456 1323.66436 74925.75 0.75613 0.00050119 0.45884 0.00030414 1.215 0.00080533 662.839646877486 667.843930825351 31.01 0.51802 31.01 30.742 31.26 0 172 47 6 0 0 0 1.7646E-09 3 15191 152.37 140.32 1 1.2977 1.317 0 18215000 8335500 9879800 13757 542 5238 5366 21496;21497;21498 21497 GNLGAGNGNLQGPR 14 0 1 Unmodified _GNLGAGNGNLQGPR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;D6RBI2;D6RE02;D6RIA2;D6RAM9;D6RAY2 D6REM6 D6REM6 MATR3;DKFZp686K0542 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.8388 2 662.839456 1323.66436 75060.53 0.35317 0.00023409 0.71654 0.00047495 1.0697 0.00070904 662.840523947321 667.843764639037 30.407 0.57515 30.407 30.177 30.752 0 174 47 6 0 0 0 1.5682E-37 1 14914 166.07 155.26 1 1.2758 1.3449 0 23306000 10081000 13225000 13758 542 5238 5366 21499 21499 GNLGAGNGNLQGPR 14 0 1 Unmodified _GNLGAGNGNLQGPR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;D6RBI2;D6RE02;D6RIA2;D6RAM9;D6RAY2 D6REM6 D6REM6 MATR3;DKFZp686K0542 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.3416 2 662.839456 1323.66436 71819.02 0.40231 0.00026666 0.65274 0.00043266 1.055 0.00069933 662.840895948496 667.843943233998 35.693 0.76056 35.693 35.349 36.109 0 200 61 6 0 0 0 0.0090321 1 15938 37.696 33.542 1 0.5626 0.48759 0 2029300 1342800 686570 13759 542 5238 5366 21500 21500 GNLNFTCDGNSVISPVGNR 19 0 1 Unmodified _GNLNFTCDGNSVISPVGNR_ 0 0 0 Q15269;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1011.4821 2 1010.97889 2019.94324 60831.94 0.005574 5.6352E-06 0.24842 0.00025115 0.25399 0.00025678 1010.97929911211 1015.98311742355 89.317 0.42702 89.317 89.101 89.528 0 162 37 6 0 0 0 7.8921E-12 3 53833 101.3 101.3 1 0.94541 0.97491 0 19894000 10591000 9303300 13760 1756 5239 5367 21501;21502;21503 21502 GNLNFTCDGNSVISPVGNR 19 0 1 Unmodified _GNLNFTCDGNSVISPVGNR_ 0 0 0 Q15269;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1011.4825 2 1010.97889 2019.94324 61494.36 0.15854 0.00016028 -0.16169 -0.00016347 -0.0031559 -3.1905E-06 1010.97910801617 1015.98300207335 88.412 0.42764 88.412 88.175 88.602 0 117 38 5 0 0 0 3.4949E-12 3 54419 107.65 101.99 1 0.81528 0.89212 0 33686000 15246000 18440000 13761 1756 5239 5367 21504;21505;21506 21504 GNLNFTCDGNSVISPVGNR 19 0 1 Unmodified _GNLNFTCDGNSVISPVGNR_ 0 0 0 Q15269;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1010.9772 2 1010.97889 2019.94324 60287.88 0.12183 0.00012317 -1.2981 -0.0013124 -1.1763 -0.0011892 1011.4807252117 1016.48267081088 102.27 0.72772 102.27 101.92 102.65 0 298 53 8 0 0 0 0.011132 1 56996 24.929 24.929 1 1.8249 1.5453 0 18426000 6357000 12069000 13762 1756 5239 5367 21507 21507 GNLTPLTGR 9 0 1 Unmodified _GNLTPLTGR_ 0 0 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.7683 2 464.764166 927.513779 87405.41 0.073625 3.4218E-05 1.7589 0.00081746 1.8325 0.00085168 464.764127574631 469.768519764948 43.221 0.45029 43.221 42.985 43.435 0 183 35 7 0 0 0 0.0019257 1 23071 79.059 49.91 1 0.53992 0.59959 0 71054000 43044000 28011000 13763 918 5240 5368 21508 21508 GNLTPLTGR 9 0 1 Unmodified _GNLTPLTGR_ 0 0 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.7687 2 464.764166 927.513779 87447.51 0.3197 0.00014858 -0.065134 -3.0272E-05 0.25456 0.00011831 464.763963781914 469.768402556812 42.241 0.8471 42.241 41.885 42.733 0 223 74 4 0 0 0 0.024971 1 22611 48.048 25.524 1 0.71359 0.77973 0 36986000 23638000 13348000 13764 918 5240 5368 21509 21509 GNLYSFGCPEYGQLGHNSDGK 21 1 0 Unmodified _GNLYSFGCPEYGQLGHNSDGK_ 0 0 0 A5PLK7;A0A024RAC5;Q9P258 A5PLK7 A5PLK7 RCC2 Protein RCC2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.6743 3 767.339408 2298.99639 70533.62 0.85994 0.00065987 -0.29165 -0.00022379 0.56829 0.00043607 767.673468589386 770.344963406057 88.939 0.42905 88.939 88.675 89.104 0 158 29 7 0 0 0 0.038451 1 49053 13.455 13.455 1 0.72896 0.58342 0 2890800 1769100 1121700 13765 301 5241 5369 21510 21510 GNNVYCLDR 9 0 1 Unmodified _GNNVYCLDR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.7577 2 555.753472 1109.49239 NaN NaN NaN -0.086324 -4.7975E-05 NaN NaN NaN NaN 37.461 0.36326 37.461 37.319 37.682 0 0 0 0 0.021499 1 19521 57.708 47.721 1 NaN NaN 0 10386000 0 10386000 13766 1607 5242 5370 21511 21511 GNSCILADEMGLGK 14 1 0 Oxidation (M) _GNSCILADEM(ox)GLGK_ GNSCILADEM(1)GLGK GNSCILADEM(47.99)GLGK 0 1 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.8435 2 740.842158 1479.66976 72294.38 0.725 0.00053711 -0.0019879 -1.4727E-06 0.72301 0.00053564 740.84252452178 744.84940386582 61.295 0.37608 61.295 61.129 61.505 0 97 33 4 0 0 0 0.0014232 1 35866 47.991 38.803 1 1.0277 1.0284 0 15510000 9280300 6229500 13767 1366 5243 5371 21512 21512 1031 GNSIIMLEALER 12 0 1 Oxidation (M) _GNSIIM(ox)LEALER_ GNSIIM(1)LEALER GNSIIM(72.65)LEALER 0 1 0 Q49AN9;F5H013;P62308;A8MWD9 Q49AN9 Q49AN9 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.3637 2 681.358302 1360.70205 74656.07 0.74561 0.00050803 0.43094 0.00029362 1.1766 0.00080165 681.358635913374 686.36335068506 98.135 0.41477 98.135 97.85 98.265 0 93 33 4 0 0 0 0.00015773 1 59967 72.652 64.432 1 1.3656 1.3658 0 16856000 6484800 10372000 13768 798 5244 5372 21513 21513 643 GNSIIMLEALER 12 0 1 Oxidation (M) _GNSIIM(ox)LEALER_ GNSIIM(1)LEALER GNSIIM(42.74)LEALER 0 1 0 Q49AN9;F5H013;P62308;A8MWD9 Q49AN9 Q49AN9 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3575 2 681.358302 1360.70205 73432.73 0.86518 0.0005895 -1.3326 -0.00090796 -0.4674 -0.00031846 681.358329976882 687.363063121338 98.503 0.74358 98.503 98.072 98.816 0 244 60 6 0 0 0 0.0075808 1 60294 42.743 37.102 1 1.7496 1.7944 0 25865000 6772400 19093000 13769 798 5244 5372 21514 21514 643 GNSIIMLEALER 12 0 1 Oxidation (M) _GNSIIM(ox)LEALER_ GNSIIM(1)LEALER GNSIIM(47.29)LEALER 0 1 0 Q49AN9;F5H013;P62308;A8MWD9 Q49AN9 Q49AN9 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3587 2 681.358302 1360.70205 73038.47 0.39669 0.00027029 -1.1448 -0.00078002 -0.74812 -0.00050974 681.358484052014 686.363533058556 97.743 0.63039 97.743 97.41 98.041 0 225 49 7 0 0 0 0.0044537 1 61072 47.288 35.125 1 1.7273 1.6962 0 13691000 5419100 8272200 13770 798 5244 5372 21515 21515 643 GNSLQEILER 10 0 1 Unmodified _GNSLQEILER_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H7C0A4;Q5HYC5 A0A024R4E5 A0A024R4E5 HDLBP;DKFZp686L08115 Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.8126 2 579.809302 1157.60405 84698.43 0.4303 0.00024949 -0.70273 -0.00040745 -0.27242 -0.00015795 579.809323148686 584.812688125823 83.408 0.4725 83.408 83.215 83.688 0 131 39 5 0 0 0 0.0002967 1 49910 90.906 53.178 1 1.5337 1.5834 0 23946000 7930600 16016000 13771 154 5245 5373 21516 21516 GNSLQEILER 10 0 1 Unmodified _GNSLQEILER_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H7C0A4;Q5HYC5 A0A024R4E5 A0A024R4E5 HDLBP;DKFZp686L08115 Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8135 2 579.809302 1157.60405 83611.84 0.67936 0.0003939 -0.46202 -0.00026789 0.21733 0.00012601 579.80900262213 584.813379791696 82.346 0.4708 82.346 82.068 82.538 0 163 41 7 0 0 0 1.4212E-05 1 50392 102.07 64.34 1 1.8825 2.04 0 27596000 11492000 16104000 13772 154 5245 5373 21517 21517 GNSLTLIDLPGHESLR 16 0 1 Unmodified _GNSLTLIDLPGHESLR_ 0 0 0 Q549N5;Q9Y5M8 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.3149 3 574.644209 1720.9108 NaN NaN NaN -0.59317 -0.00034086 NaN NaN NaN NaN 96.08 0.60265 96.08 95.709 96.312 0 0 0 0 0.012589 1 58505 36.451 26.255 1 NaN NaN 0 11596000 0 11596000 13773 1794 5246 5374 21518 21518 GNTAAYLLYAFTR 13 0 1 Unmodified _GNTAAYLLYAFTR_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.8852 2 730.880259 1459.74596 NaN NaN NaN -0.11727 -8.5708E-05 NaN NaN NaN NaN 121.22 0.51692 121.22 120.97 121.49 0 0 0 0 2.1776E-14 2 78226 128.08 111.51 1 NaN NaN 0 6960000 0 6960000 13774 1609 5247 5375 21519;21520 21520 GNTAAYLLYAFTR 13 0 1 Unmodified _GNTAAYLLYAFTR_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.8806 2 730.880259 1459.74596 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.1 1 121.1 120.6 121.6 0 0 0 0 0.0015018 1 78187 72.652 58.445 1 13775 1609 5247 5375 21521 21521 GNTAAYLLYAFTR 13 0 1 Unmodified _GNTAAYLLYAFTR_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.8838 2 730.880259 1459.74596 71010.66 0.96594 0.00070598 0.094554 6.9108E-05 1.0605 0.00077509 730.880200574446 735.884270040967 120.61 0.53833 120.61 120.37 120.9 0 157 38 6 0 0 0 4.9147E-06 2 79620 106.49 97.593 1 1.6368 1.6138 0 14728000 6392100 8336100 13776 1609 5247 5375 21522;21523 21522 GNTAAYLLYAFTR 13 0 1 Unmodified _GNTAAYLLYAFTR_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.8853 2 730.880259 1459.74596 NaN NaN NaN -0.41056 -0.00030007 NaN NaN NaN NaN 134.06 0.5504 134.06 133.7 134.25 0 0 0 0 0.0019927 1 81744 72.29 52.504 1 NaN NaN 0 1834700 0 1834700 13777 1609 5247 5375 21524 21524 GNTAAYLLYAFTR 13 0 1 Unmodified _GNTAAYLLYAFTR_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.8844 2 730.880259 1459.74596 NaN NaN NaN 0.18512 0.0001353 NaN NaN NaN NaN 133.73 0.47063 133.73 133.47 133.95 0 0 0 0 0.041022 1 80631 41.218 24.278 1 NaN NaN 0 1751700 0 1751700 13778 1609 5247 5375 21525 21525 GNTFVHDPK 9 1 0 Unmodified _GNTFVHDPK_ 0 0 0 Q92878;E7EN38;Q32P42;E7ESD9;A8K3I2;E9PM98;A5D6Y3 Q92878 Q92878 RAD50 DNA repair protein RAD50 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7607 2 507.753798 1013.49304 NaN NaN NaN -1.0876 -0.00055224 NaN NaN NaN NaN 20.225 0.28339 20.225 20.133 20.417 0 0 0 0 9.9969E-05 1 6555 100.02 71.91 1 NaN NaN 0 5847900 0 5847900 13779 1953 5248 5376 21526 21526 GNTHTEILK 9 1 0 Unmodified _GNTHTEILK_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.775 2 506.774731 1011.53491 NaN NaN NaN -0.036565 -1.853E-05 NaN NaN NaN NaN 20.772 0.27527 20.772 20.66 20.935 0 0 0 0 7.2327E-06 1 7181 115.82 39.051 1 NaN NaN 0 16631000 16631000 0 + 13780 1164 5249 5377 21527 21527 GNTHTEILK 9 1 0 Unmodified _GNTHTEILK_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.7748 2 506.774731 1011.53491 86152.63 0.45058 0.00022834 0.027737 1.4057E-05 0.47831 0.0002424 506.774701785524 510.78197615674 20.735 0.7463 20.735 20.381 21.127 0 55 28 7 0 0 0 0.00044654 1 6842 99.136 43.125 1 0.83112 0.91179 0 41199000 23127000 18072000 + 13781 1164 5249 5377 21528 21528 GNTHTEILK 9 1 0 Unmodified _GNTHTEILK_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.7744 2 506.774731 1011.53491 NaN NaN NaN 0.0068315 3.462E-06 NaN NaN NaN NaN 22.017 0.23537 22.017 21.889 22.125 0 0 0 0 5.3473E-11 1 6918 131.5 66.937 1 NaN NaN 0 2260000 2260000 0 + 13782 1164 5249 5377 21529 21529 GNTHTEILK 9 1 0 Unmodified _GNTHTEILK_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.775 2 506.774731 1011.53491 NaN NaN NaN 0.24907 0.00012622 NaN NaN NaN NaN 21.815 0.29649 21.815 21.648 21.944 0 0 0 0 0.012855 1 6309 64.485 21.615 1 NaN NaN 0 1322900 1322900 0 + 13783 1164 5249 5377 21530 21530 GNVATEISIER 11 0 1 Unmodified _GNVATEISIER_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.8135 2 594.814584 1187.61462 NaN NaN NaN -1.1249 -0.00066908 NaN NaN NaN NaN 59.98 0.25799 59.98 59.862 60.12 3.8147E-06 0 0 0 4.0226E-05 1 34236 100.48 77.157 1 NaN NaN 0 8029500 8029500 0 + 13784 1146 5250 5378 21531 21531 GNVGFVFTK 9 1 0 Unmodified _GNVGFVFTK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7709 2 484.763635 967.512717 85387.73 0.13617 6.6012E-05 -0.28033 -0.00013589 -0.14416 -6.9881E-05 484.763335974916 488.770447600447 73.037 1.1576 73.037 72.091 73.248 0 347 91 13 0 0 0 0.007781 1 42735 61.679 51.541 1 1.0641 1.285 0 1583400000 771720000 811680000 13785 345 5251 5379 21532 21532 GNVGFVFTK 9 1 0 Unmodified _GNVGFVFTK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7638 2 484.763635 967.512717 83489.25 -0.060697 -2.9424E-05 -0.34363 -0.00016658 -0.40432 -0.000196 484.763338143732 488.770450041461 71.664 1.2129 71.664 70.858 72.071 0 304 94 11 0 0 0 0.018227 2 42888 52.255 42.068 1 1.0361 1.2242 0 1313300000 658550000 654750000 13786 345 5251 5379 21533;21534 21533 GNVGFVFTK 9 1 0 Unmodified _GNVGFVFTK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.7709 2 484.763635 967.512717 86500.52 0.11641 5.6432E-05 -0.31017 -0.00015036 -0.19376 -9.3929E-05 484.763188171815 488.77039239865 83.432 0.95761 83.432 82.579 83.537 0 156 58 8 0 0 0 0.0019956 2 45427 78.149 61.995 1 0.974 0.83709 0 86307000 44391000 41917000 13787 345 5251 5379 21535;21536 21535 GNVGFVFTK 9 1 0 Unmodified _GNVGFVFTK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;F8VQY6;F8VPE8;F8VRK7;F8VS58;F8VWV4 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.7708 2 484.763635 967.512717 86367.71 0.40078 0.00019428 -0.28873 -0.00013997 0.11205 5.4316E-05 484.763154308986 488.770371059304 83.525 1.0076 83.525 82.684 83.692 0 235 57 10 0 0 0 0.0040455 2 44683 70.256 55.592 1 0.94528 0.80118 0 63642000 33826000 29815000 13788 345 5251 5379 21537;21538 21538 GNVVPSPLPTR 11 0 1 Unmodified _GNVVPSPLPTR_ 0 0 0 Q9Y2V2;H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9 Q9Y2V2 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.8285 2 568.824755 1135.63496 79559.41 0.52478 0.00029851 0.72454 0.00041214 1.2493 0.00071065 568.82557415971 573.829359001755 66.061 1.0717 66.061 65.685 66.757 0 272 93 5 0 0 0 0.01831 1 38194 44.863 30.861 1 1.4215 1.4514 0 30994000 14024000 16970000 13789 2127 5252 5380 21539 21539 GNVVPSPLPTR 11 0 1 Unmodified _GNVVPSPLPTR_ 0 0 0 Q9Y2V2;H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9 Q9Y2V2 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.8299 2 568.824755 1135.63496 80763.44 0.5538 0.00031502 0.014675 8.3475E-06 0.56848 0.00032336 568.825266665299 573.828903372474 64.824 0.97742 64.824 64.648 65.625 0 157 80 5 0 0 0 0.036293 1 38393 36.585 28.653 1 1.7784 1.8961 0 24554000 8243200 16311000 13790 2127 5252 5380 21540 21540 GNYHYLVK 8 1 0 Unmodified _GNYHYLVK_ 0 0 0 Q12873;H7C2H0 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2671 2 497.261259 992.507966 NaN NaN NaN -2.4552 -0.0012209 NaN NaN NaN NaN 27.214 0.41198 27.214 27.112 27.524 0 0 0 0 0.020224 1 12530 65.252 42.233 1 NaN NaN 0 4416300 0 4416300 13791 1701 5253 5381 21541 21541 GPAAPPPTPVKPPR 14 1 1 Unmodified _GPAAPPPTPVKPPR_ 0 0 1 E9PIE3;Q969G5 E9PIE3 E9PIE3 PRKCDBP Protein kinase C delta-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.278 3 461.269866 1380.78777 92114.18 0.46748 0.00021564 -0.15238 -7.0289E-05 0.3151 0.00014535 461.604195076858 467.277263501847 38.538 0.49951 38.538 38.369 38.868 0 99 40 4 0 0 0 0.003075 1 19982 35.809 33.244 1 0.94998 1.0491 0 8273700 4727500 3546200 13792 1239 5254 5382 21542 21542 GPAFVNPLIPESPEEEELFR 20 0 1 Unmodified _GPAFVNPLIPESPEEEELFR_ 0 0 0 Q9Y305;H7C5Q2 Q9Y305 Q9Y305 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1141.078 2 1135.57061 2269.12666 NaN NaN NaN 0.29751 0.00033785 NaN NaN NaN NaN 126.62 0.40338 126.62 126.44 126.84 7.6294E-06 0 0 0 2.9692E-18 1 82384 113.77 108.61 1 NaN NaN 0 12025000 0 12025000 13793 2130 5255 5383 21543 21543 GPAFVNPLIPESPEEEELFR 20 0 1 Unmodified _GPAFVNPLIPESPEEEELFR_ 0 0 0 Q9Y305;H7C5Q2 Q9Y305 Q9Y305 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1141.075 2 1135.57061 2269.12666 NaN NaN NaN 0.42157 0.00047872 NaN NaN NaN NaN 126.25 0.38528 126.25 126.06 126.45 -7.6294E-06 0 0 0 7.269E-14 1 84152 101.39 87.426 1 NaN NaN 0 13621000 0 13621000 13794 2130 5255 5383 21544 21544 GPAPAGEQLR 10 0 1 Unmodified _GPAPAGEQLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.2669 2 498.267073 994.519593 85639.41 -0.12259 -6.1082E-05 1.5308 0.00076272 1.4082 0.00070164 498.268530223154 503.271617445176 27.113 0.52421 27.113 26.822 27.346 0 83 22 7 0 0 0 0.013553 1 9997 49.418 31.382 1 1.3886 1.2107 0 2598100 1221200 1376900 13795 2038 5256 5384 21545 21545 GPASVPSVGK 10 1 0 Unmodified _GPASVPSVGK_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.7533 2 449.753267 897.491981 93954.63 0.48036 0.00021605 -0.13958 -6.2777E-05 0.34078 0.00015327 449.753260662626 453.760299522359 29.211 0.3695 29.211 29.096 29.465 0 89 26 5 0 0 0 0.00051176 1 14178 85.676 65.155 1 0.84917 0.90541 0 20870000 10799000 10071000 13796 1712;1225 5257 5385 21546 21546 GPASVPSVGK 10 1 0 Unmodified _GPASVPSVGK_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 453.7607 2 449.753267 897.491981 91603.16 0.20666 9.2948E-05 -0.12904 -5.8036E-05 0.077625 3.4912E-05 449.753108300914 453.760457933572 33.535 0.31719 33.535 33.382 33.699 0 61 24 4 0 0 0 0.035715 1 14758 40.502 25.121 1 1.7189 1.3403 0 3761900 1209200 2552700 13797 1712;1225 5257 5385 21547 21547 GPASVPSVGK 10 1 0 Unmodified _GPASVPSVGK_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 453.7607 2 449.753267 897.491981 90604.41 -0.029433 -1.3238E-05 0.1162 5.226E-05 0.086765 3.9023E-05 449.753114740234 453.760628181037 33.615 0.27967 33.615 33.512 33.792 0 59 21 4 0 0 0 0.034493 1 14254 40.994 19.694 1 1.9891 1.5924 0 3057200 878960 2178200 13798 1712;1225 5257 5385 21548 21548 GPATLVAPASVITIVK 16 1 0 Unmodified _GPATLVAPASVITIVK_ 0 0 0 Q9ULX9 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.473 2 768.971616 1535.92868 69424.13 0.81976 0.00063037 0.11711 9.0052E-05 0.93687 0.00072043 768.971696466081 772.978785118866 116.73 0.49009 116.73 116.48 116.97 0 206 32 8 0 0 0 1.4448E-12 1 74480 122.42 110.96 1 1.0982 1.2184 0 59225000 28531000 30694000 13799 2112 5258 5386 21549 21549 GPATLVAPASVITIVK 16 1 0 Unmodified _GPATLVAPASVITIVK_ 0 0 0 Q9ULX9 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.9731 2 768.971616 1535.92868 69499.61 0.82117 0.00063146 0.19792 0.0001522 1.0191 0.00078365 768.971679947499 772.978838595535 116.15 0.53741 116.15 115.91 116.45 7.6294E-06 215 34 9 0 0 0 1.0895E-08 1 75827 106.49 97.385 1 1.1204 1.2616 0 69673000 30838000 38835000 13800 2112 5258 5386 21550 21550 GPATLVAPASVITIVK 16 1 0 Unmodified _GPATLVAPASVITIVK_ 0 0 0 Q9ULX9 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.4736 2 768.971616 1535.92868 69650.43 1.0094 0.00077617 -0.26415 -0.00020312 0.74522 0.00057305 768.971455245522 772.978501071073 128.83 0.56004 128.83 128.58 129.14 0 180 25 10 0 0 0 5.5258E-05 2 77798 83.182 82.942 1 1.6043 1.2831 0 20558000 8133000 12425000 13801 2112 5258 5386 21551;21552 21552 GPATLVAPASVITIVK 16 1 0 Unmodified _GPATLVAPASVITIVK_ 0 0 0 Q9ULX9 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.9782 2 768.971616 1535.92868 69348.46 1.0295 0.00079169 -0.13633 -0.00010483 0.89322 0.00068686 768.971601051282 772.978589736228 128.62 0.65096 128.62 128.32 128.98 -1.5259E-05 171 25 10 0 0 0 0.0001112 2 76735 78.548 71.575 1 1.5684 1.2888 0 27902000 10734000 17167000 13802 2112 5258 5386 21553;21554 21553 GPAVGIDLGTTYSCVGVFQHGK 22 1 0 Unmodified _GPAVGIDLGTTYSCVGVFQHGK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;B3KTV0;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.0441 3 755.044044 2262.1103 70283.87 0.817 0.00061687 0.21795 0.00016456 1.0349 0.00078143 755.379168141246 758.049863328649 102.22 0.75021 102.22 101.87 102.62 0 301 61 8 0 0 0 9.2911E-12 1 62972 91.637 91.637 1 0.91255 0.97775 0 32514000 15436000 17078000 13803 1467 5259 5387 21555 21555 GPAVGIDLGTTYSCVGVFQHGK 22 1 0 Unmodified _GPAVGIDLGTTYSCVGVFQHGK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;B3KTV0;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.0496 3 755.044044 2262.1103 69963.48 0.7596 0.00057353 -0.13071 -9.8694E-05 0.62888 0.00047484 755.379022151289 757.715092145379 101.57 0.78783 101.57 101.09 101.88 0 324 62 9 0 0 0 3.7695E-09 3 63811 77.959 77.959 1 0.98804 1.1396 0 186530000 83864000 102670000 13804 1467 5259 5387 21556;21557;21558 21557 GPAVGIDLGTTYSCVGVFQHGK 22 1 0 Unmodified _GPAVGIDLGTTYSCVGVFQHGK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;B3KTV0;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 755.3785 3 755.044044 2262.1103 68613.91 1.1632 0.00087825 -0.094059 -7.1019E-05 1.0691 0.00080723 755.378167409648 758.049820034509 113.83 0.61481 113.83 113.64 114.25 0 165 27 11 0 0 0 2.5532E-16 2 66365 106.73 106.73 1 1.6333 1.328 0 29434000 11580000 17854000 13805 1467 5259 5387 21559;21560 21560 GPAVGIDLGTTYSCVGVFQHGK 22 1 0 Unmodified _GPAVGIDLGTTYSCVGVFQHGK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;B3KTV0;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 758.0502 3 755.044044 2262.1103 68854.36 0.65513 0.00049466 -0.37 -0.00027936 0.28514 0.00021529 755.37797577636 757.7152759765 113.66 0.68086 113.66 113.44 114.13 0 192 31 11 0 0 0 3.5633E-22 3 65304 113.63 113.63 1 1.3486 1.0874 0 23166000 9536300 13630000 13806 1467 5259 5387 21561;21562;21563 21563 GPCIIYNEDNGIIK 14 1 0 Unmodified _GPCIIYNEDNGIIK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.408 2 803.400698 1604.78684 68297.95 0.80501 0.00064674 -0.81464 -0.00065449 -0.0096362 -7.7417E-06 803.901314702703 807.407910934351 84.148 0.77692 84.148 83.792 84.569 7.6294E-06 447 64 10 0 0 0 0.00017989 1 51437 72.2 72.2 1 0.95329 1.0931 0 166380000 93509000 72872000 13807 1548 5260 5388 21564 21564 GPCIIYNEDNGIIK 14 1 0 Unmodified _GPCIIYNEDNGIIK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.9102 2 803.400698 1604.78684 67023.34 0.7155 0.00057483 0.37246 0.00029923 1.088 0.00087406 803.401200467006 807.407977578029 97.491 0.80117 97.491 97.002 97.803 0 273 43 10 0 0 0 0.023159 1 54713 33.057 33.057 1 1.0211 0.82485 0 22827000 11329000 11498000 13808 1548 5260 5388 21565 21565 GPCIIYNEDNGIIK 14 1 0 Unmodified _GPCIIYNEDNGIIK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 807.4088 2 803.400698 1604.78684 67173.91 0.38055 0.00030574 0.53601 0.00043063 0.91657 0.00073637 803.401592224322 807.407928133363 97.434 0.87833 97.434 96.841 97.719 0 263 44 10 0 0 0 0.00019732 2 54015 69.721 69.721 1 0.94129 0.76218 0 24139000 12971000 11168000 13809 1548 5260 5388 21566;21567 21567 GPCQESFYNLGR 12 0 1 Unmodified _GPCQESFYNLGR_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.3274 2 714.322251 1426.62995 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.715 1 67.715 67.215 68.215 0 0 0 0 0.0011892 1 39173 70.908 58.332 1 13810 2150 5261 5389 21568 21568 GPCQESFYNLGR 12 0 1 Unmodified _GPCQESFYNLGR_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.3259 2 714.322251 1426.62995 74986.35 0.71083 0.00050776 0.4399 0.00031423 1.1507 0.00082199 714.322946713798 719.326778771856 66.583 0.33273 66.583 66.427 66.76 0 85 27 5 0 0 0 0.0047147 1 39309 52.79 48.324 1 1.1783 1.1831 0 9228000 4007400 5220700 13811 2150 5261 5389 21569 21569 GPDGLTAFEATDNQAIK 17 1 0 Unmodified _GPDGLTAFEATDNQAIK_ 0 0 0 C9JL85;Q69YG1;P58546 C9JL85 C9JL85 MTPN;DKFZp761E1322 Myotrophin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 878.4366 2 874.428498 1746.84244 65001.64 0.65777 0.00057517 0.012682 1.1089E-05 0.67045 0.00058626 874.929858476858 878.937708623629 85.28 0.56576 85.28 85.081 85.647 0 173 45 6 0 0 0 5.4936E-07 1 51146 95.094 95.094 1 1.0729 1.0511 0 21628000 9625400 12002000 13812 1137 5262 5390 21570 21570 GPDGLTAFEATDNQAIK 17 1 0 Unmodified _GPDGLTAFEATDNQAIK_ 0 0 0 C9JL85;Q69YG1;P58546 C9JL85 C9JL85 MTPN;DKFZp761E1322 Myotrophin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.4374 2 874.428498 1746.84244 65095.13 0.50373 0.00044048 -0.085114 -7.4426E-05 0.41862 0.00036605 874.428500892626 878.435789086606 84.478 0.57652 84.478 84.186 84.762 0 222 46 7 0 0 0 0.00013701 1 51732 56.205 56.205 1 1.0125 1.076 0 20578000 10490000 10088000 13813 1137 5262 5390 21571 21571 GPDNSMGFGAER 12 0 1 Oxidation (M) _GPDNSM(ox)GFGAER_ GPDNSM(1)GFGAER GPDNSM(74.96)GFGAER 0 1 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;E9PLT0;Q9UG93;Q8WU01;Q9UG12 Q9GZV0 Q9GZV0 CSDE1;DKFZp586J0620;DKFZp566C233 Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.2652 2 627.264401 1252.51425 77744.54 0.57573 0.00036113 0.1817 0.00011398 0.75743 0.00047511 627.264410712438 632.268556016806 23.841 0.68777 23.841 23.373 24.061 0 81 33 5 0 0 0 8.7845E-05 1 9696 74.962 69.48 1 4.6831 4.7597 0 18357000 3136200 15220000 13814 42 5263 5391 21572 21572 24 GPDNSMGFGAER 12 0 1 Oxidation (M) _GPDNSM(ox)GFGAER_ GPDNSM(1)GFGAER GPDNSM(101.39)GFGAER 0 1 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;E9PLT0;Q9UG93;Q8WU01;Q9UG12 Q9GZV0 Q9GZV0 CSDE1;DKFZp586J0620;DKFZp566C233 Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.2684 2 627.264401 1252.51425 77350.51 0.52384 0.00032859 0.11723 7.3536E-05 0.64108 0.00040212 627.264672270404 632.268544042422 23.61 0.46119 23.61 23.383 23.844 -1.9073E-06 60 19 6 0 0 0 1.1773E-05 2 9441 101.39 89.546 1 3.9711 3.9614 0 16665000 3777000 12888000 13815 42 5263 5391 21573;21574 21573 24 GPECAAAATAGKPPRPDGPADPAK 24 2 1 Unmodified _GPECAAAATAGKPPRPDGPADPAK_ 0 0 2 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.7247 3 768.046336 2301.11718 NaN NaN NaN -0.59733 -0.00045878 NaN NaN NaN NaN 36.559 0.22264 36.559 36.448 36.671 3.8147E-06 0 0 0 0.0023589 1 15891 34.914 30.012 1 NaN NaN 0 1355500 0 1355500 13816 1879 5264 5392 21575 21575 GPEEASSEVQDTNEVHVPGDQDEPQTLGK 29 1 0 Unmodified _GPEEASSEVQDTNEVHVPGDQDEPQTLGK_ 0 0 0 Q96N64 Q96N64 Q96N64 PWWP2A PWWP domain-containing protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1032.1387 3 1031.46908 3091.38541 59669.57 0.30109 0.00031057 0.070154 7.2361E-05 0.37125 0.00038293 1031.80353371643 1034.80922219292 67.429 0.35118 67.429 67.24 67.592 0 149 27 8 0 0 0 8.0978E-11 1 39950 54.605 54.038 1 0.69622 0.74312 0 20963000 13181000 7781800 13817 1980 5265 5393 21576 21576 GPEEASSEVQDTNEVHVPGDQDEPQTLGK 29 1 0 Unmodified _GPEEASSEVQDTNEVHVPGDQDEPQTLGK_ 0 0 0 Q96N64 Q96N64 Q96N64 PWWP2A PWWP domain-containing protein 2A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1034.1405 3 1031.46908 3091.38541 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.477 1 67.477 66.977 67.977 0 0 0 0 0.010355 1 39980 40.28 33.985 1 13818 1980 5265 5393 21577 21577 GPEEASSEVQDTNEVHVPGDQDEPQTLGK 29 1 0 Unmodified _GPEEASSEVQDTNEVHVPGDQDEPQTLGK_ 0 0 0 Q96N64 Q96N64 Q96N64 PWWP2A PWWP domain-containing protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1031.8042 3 1031.46908 3091.38541 59551.67 0.35031 0.00036134 0.1484 0.00015307 0.49871 0.00051441 1032.13766751872 1034.47488989257 78.713 0.41948 78.713 78.553 78.972 0 168 23 10 0 0 0 0.02453 1 42288 15.813 15.813 1 1.3446 1.0696 0 6646700 2513100 4133700 13819 1980 5265 5393 21578 21578 GPEEASSEVQDTNEVHVPGDQDEPQTLGK 29 1 0 Unmodified _GPEEASSEVQDTNEVHVPGDQDEPQTLGK_ 0 0 0 Q96N64 Q96N64 Q96N64 PWWP2A PWWP domain-containing protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1031.804 3 1031.46908 3091.38541 58923.54 0.29974 0.00030917 0.1927 0.00019876 0.49244 0.00050793 1032.13802710512 1034.47496107732 79.023 0.45696 79.023 78.788 79.245 0 199 27 11 0 0 0 0.035941 1 41634 11.777 11.211 1 1.5051 1.2272 0 6518000 2860700 3657300 13820 1980 5265 5393 21579 21579 GPEPVPLEFIPAQGLLGR 18 0 1 Unmodified _GPEPVPLEFIPAQGLLGR_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.557 2 945.527818 1889.04108 66093.38 1.0785 0.0010197 0.019874 1.8791E-05 1.0984 0.0010385 946.029090350256 950.532737707345 131.12 0.36929 131.12 130.97 131.34 0 73 24 5 0 0 0 5.5995E-05 4 85496 56.225 56.225 1 0.6796 0.70716 0 5340800 2441700 2899100 13821 2007 5266 5394 21580;21581;21582;21583 21580 GPEPVPLEFIPAQGLLGR 18 0 1 Unmodified _GPEPVPLEFIPAQGLLGR_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.5274 2 945.527818 1889.04108 NaN NaN NaN -0.25232 -0.00023858 NaN NaN NaN NaN 130.69 0.38626 130.69 130.52 130.9 0 0 0 0 4.2184E-06 1 87400 85.845 70.643 1 NaN NaN 0 4559500 4559500 0 13822 2007 5266 5394 21584 21584 GPEVTSNAALTLR 13 0 1 Unmodified _GPEVTSNAALTLR_ 0 0 0 B2RB33;Q8NE26;Q5HYL0;Q9UHI8;E5RJR7;E5RI60;H7C206;Q6ZP79 B2RB33 B2RB33 ADAMTS1;DKFZp686E01144 A disintegrin and metalloproteinase with thrombospondin motifs 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.8629 2 664.862066 1327.70958 75710.29 0.62274 0.00041404 0.36718 0.00024412 0.98992 0.00065816 664.861673840986 669.866977630671 68.304 0.54111 68.304 68.035 68.576 0 112 48 4 0 0 0 6.235E-06 1 39609 104.82 98.903 1 0.86922 0.91255 0 11135000 5647800 5487000 13823 877 5267 5395 21585 21585 GPEVTSNAALTLR 13 0 1 Unmodified _GPEVTSNAALTLR_ 0 0 0 B2RB33;Q8NE26;Q5HYL0;Q9UHI8;E5RJR7;E5RI60;H7C206;Q6ZP79 B2RB33 B2RB33 ADAMTS1;DKFZp686E01144 A disintegrin and metalloproteinase with thrombospondin motifs 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8633 2 664.862066 1327.70958 76577.23 0.59577 0.00039611 0.084915 5.6457E-05 0.68069 0.00045256 664.861813590506 669.866711900585 67.13 0.40565 67.13 66.969 67.375 0 98 33 4 0 0 0 0.00014979 1 39705 88.441 84.554 1 0.63863 0.64319 0 10729000 5482500 5246600 13824 877 5267 5395 21586 21586 GPFATFK 7 1 0 Unmodified _GPFATFK_ 0 0 0 A0A024R333;Q6UXN9;C9JBU3 A0A024R333 A0A024R333 TMEM113;WDR82 WD repeat-containing protein 82 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 388.2151 2 384.207964 766.401375 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.595 1 52.595 52.095 53.095 -3.8147E-06 0 0 0 0.02074 1 29265 78.616 63.84 1 13825 128 5268 5396 21587 21587 GPFLVSAPLSTIINWER 17 0 1 Unmodified _GPFLVSAPLSTIINWER_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;Q12873 F5GWX5;Q12873 F5GWX5 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.0277 2 950.519993 1899.02543 61805.5 0.57825 0.00054963 1.0445 0.00099284 1.6228 0.0015425 950.521950633214 956.026019436795 133.52 0.33139 133.52 133.26 133.59 0 19 8 6 0 0 0 1.4574E-12 1 87503 116.24 76.32 1 NaN NaN 0 131740000 55195000 76550000 13826 515;1701 5269 5397 21588 21588 GPFLVSAPLSTIINWER 17 0 1 Unmodified _GPFLVSAPLSTIINWER_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;Q12873 F5GWX5;Q12873 F5GWX5 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 956.0283 2 950.519993 1899.02543 62557.14 0.75033 0.0007132 1.7814 0.0016932 2.5317 0.0024064 951.022195822734 955.52592084603 134.83 0.39261 134.83 134.56 134.95 0 24 8 8 0 0 0 0.04594 1 81692 22.578 17.084 1 1.2691 1.107 0 41528000 17113000 24415000 13827 515;1701 5269 5397 21589 21589 GPFTDVVTTNLK 12 1 0 Unmodified _GPFTDVVTTNLK_ 0 0 0 A8KA83;Q9P0L0;Q59EZ6;Q53XM7;O95292;E5RK64 A8KA83;Q53XM7 A8KA83 VAPA;VAPB Vesicle-associated membrane protein-associated protein A;Vesicle-associated membrane protein-associated protein B/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.3556 2 646.34826 1290.68197 78070.33 0.49361 0.00031904 0.26204 0.00016937 0.75564 0.00048841 646.348401036243 650.355481348462 100.84 0.72723 100.84 100.52 101.25 -7.6294E-06 184 49 5 0 0 0 0.0060504 1 57003 49.5 49.5 1 1.5275 1.2084 0 5062100 2179200 2882900 13828 791;1423 5270 5398 21590 21590 GPFTDVVTTNLK 12 1 0 Unmodified _GPFTDVVTTNLK_ 0 0 0 A8KA83;Q9P0L0;Q59EZ6;Q53XM7;O95292;E5RK64 A8KA83;Q53XM7 A8KA83 VAPA;VAPB Vesicle-associated membrane protein-associated protein A;Vesicle-associated membrane protein-associated protein B/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.356 2 646.34826 1290.68197 78273.4 0.52376 0.00033853 0.27867 0.00018012 0.80242 0.00051865 646.348351074367 650.355458851511 100.71 0.75937 100.71 100.36 101.12 7.6294E-06 219 54 5 0 0 0 0.00018342 1 56096 75.387 75.387 1 1.5574 1.2769 0 5336300 2064500 3271800 13829 791;1423 5270 5398 21591 21591 GPFVTWQVVR 10 0 1 Unmodified _GPFVTWQVVR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BRD0 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.836 2 594.82984 1187.64513 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.451 1 98.451 97.951 98.951 0 0 0 0 6.7842E-05 1 60185 83.206 34.923 1 13830 1699 5271 5399 21592 21592 GPFVTWQVVR 10 0 1 Unmodified _GPFVTWQVVR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BRD0 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8339 2 594.82984 1187.64513 NaN NaN NaN 1.1679 0.00069468 NaN NaN NaN NaN 97.473 0.59315 97.473 97.118 97.711 0 0 0 0 0.0022462 1 60939 81.548 67.778 1 NaN NaN 0 7656400 0 7656400 13831 1699 5271 5399 21593 21593 GPFVTWQVVR 10 0 1 Unmodified _GPFVTWQVVR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BRD0 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.8367 2 594.82984 1187.64513 78892.58 0.72168 0.00042928 0.46315 0.0002755 1.1848 0.00070478 594.829748610343 599.834455854416 110.84 0.30728 110.84 110.66 110.97 0 42 15 4 0 0 0 0.016374 1 63158 48.283 44.875 1 1.7305 1.5139 0 1381900 405170 976700 13832 1699 5271 5399 21594 21594 GPGASGEQPEPGEAAAGGAAEEAR 24 0 1 Unmodified _GPGASGEQPEPGEAAAGGAAEEAR_ 0 0 0 A0A024R3P9;Q9H3P7 A0A024R3P9 A0A024R3P9 ACBD3 Golgi resident protein GCP60 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1088.4954 2 1083.48834 2164.96212 NaN NaN NaN 0.24289 0.00026317 NaN NaN NaN NaN 36.513 0.30549 36.513 36.391 36.696 0 0 0 0 3.531E-47 1 18763 139.49 130.67 1 NaN NaN 0 7336000 0 7336000 13833 136 5272 5400 21595 21595 GPGLASGQLYSYPAR 15 0 1 Unmodified _GPGLASGQLYSYPAR_ 0 0 0 A0A024R582;J3KMZ8;Q92785;E9PN04 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.8939 2 768.893897 1535.77324 69444.15 0.72895 0.00056049 -0.59813 -0.0004599 0.13082 0.00010058 768.893745539404 773.896774564946 74.972 0.43301 74.972 74.808 75.241 0 107 34 4 0 0 0 1.4238E-05 1 44026 89.805 89.805 1 1.3019 1.3644 0 12375000 6597400 5778100 13834 174 5273 5401 21596 21596 GPGLASGQLYSYPAR 15 0 1 Unmodified _GPGLASGQLYSYPAR_ 0 0 0 A0A024R582;J3KMZ8;Q92785;E9PN04 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.3959 2 768.893897 1535.77324 70080.27 0.63307 0.00048677 0.040378 3.1047E-05 0.67345 0.00051781 769.395631952563 774.399587585252 73.993 0.41392 73.993 73.737 74.151 0 96 33 4 0 0 0 0.00021915 1 44540 62.408 62.408 1 0.68437 0.6718 0 13760000 8146600 5613000 13835 174 5273 5401 21597 21597 GPGLGSTQGQTIALPAQGLIEFR 23 0 1 Unmodified _GPGLGSTQGQTIALPAQGLIEFR_ 0 0 0 Q2NLD4;Q2NLC9;Q5U0P9;Q56A79;Q00577 Q2NLD4 Q2NLD4 PURA Transcriptional activator protein Pur-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1156.126 2 1156.12387 2310.23319 59867.86 0.28015 0.00032389 0.83744 0.00096818 1.1176 0.0012921 1156.6257002348 1162.13268677215 121.43 0.2551 121.43 121.29 121.54 -7.6294E-06 62 15 7 0 0 0 0.0039311 1 78514 26.435 26.435 1 0.81431 0.82073 0 9448000 5348900 4099100 13836 1673 5274 5402 21598 21598 GPGLGSTQGQTIALPAQGLIEFR 23 0 1 Unmodified _GPGLGSTQGQTIALPAQGLIEFR_ 0 0 0 Q2NLD4;Q2NLC9;Q5U0P9;Q56A79;Q00577 Q2NLD4 Q2NLD4 PURA Transcriptional activator protein Pur-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1156.6257 2 1156.12387 2310.23319 58635.46 0.10318 0.00011929 0.74531 0.00086167 0.84849 0.00098096 1156.6249681116 1162.13290086863 120.98 0.24809 120.98 120.88 121.13 0 62 13 7 0 0 0 0.0041421 1 80051 25.866 25.866 1 1.1264 1.1374 0 10148000 5800600 4347100 13837 1673 5274 5402 21599 21599 GPGNPVPGPLAPLPDYMSEEK 21 1 0 Oxidation (M) _GPGNPVPGPLAPLPDYM(ox)SEEK_ GPGNPVPGPLAPLPDYM(1)SEEK GPGNPVPGPLAPLPDYM(46.48)SEEK 0 1 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1091.5316 2 1091.03026 2180.04597 59153.43 0.21117 0.00023039 -0.11382 -0.00012418 0.097349 0.00010621 1091.53142067719 1095.53832509112 101.5 0.63303 101.5 101.11 101.74 0 187 48 7 0 0 0 1.3384E-05 1 62320 46.481 46.481 1 1.4988 1.5256 0 14108000 6317600 7790000 13838 1854 5275 5403 21600 21600 1712 GPGNPVPGPLAPLPDYMSEEK 21 1 0 Oxidation (M) _GPGNPVPGPLAPLPDYM(ox)SEEK_ GPGNPVPGPLAPLPDYM(1)SEEK GPGNPVPGPLAPLPDYM(40.07)SEEK 0 1 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1091.5293 2 1091.03026 2180.04597 57772.87 0.048871 5.332E-05 -0.31685 -0.00034569 -0.26797 -0.00029237 1091.53135856193 1095.53831305891 100.81 0.56882 100.81 100.54 101.11 0 206 44 7 0 0 0 3.9953E-05 1 63463 40.066 40.066 1 1.3538 1.3536 0 15335000 7127500 8207500 13839 1854 5275 5403 21601 21601 1712 GPGPLQER 8 0 1 Unmodified _GPGPLQER_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;H0Y8T4 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.2342 2 427.229959 852.445365 93057.16 -0.20834 -8.9009E-05 0.21764 9.2981E-05 0.0092982 3.9725E-06 427.229938483479 432.234098826433 23.564 0.56285 23.564 23.271 23.834 -1.9073E-06 106 26 6 0 0 0 0.0086013 1 9357 77.923 23.765 1 1.5031 1.6619 0 58393000 23338000 35054000 13840 542 5276 5404 21602 21602 GPHLANSILFQSSGLTNGIIEEK 23 1 0 Unmodified _GPHLANSILFQSSGLTNGIIEEK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.1016 3 809.095573 2424.26489 70965.55 1.0628 0.00085991 -0.31602 -0.00025569 0.74678 0.00060422 809.429627524301 812.100760098052 111 0.60196 111 110.62 111.22 0 171 39 7 0 0 0 2.6818E-23 2 69754 121.25 116.72 1 0.69021 0.74393 0 37741000 23338000 14404000 13841 125 5277 5405 21603;21604 21604 GPHLANSILFQSSGLTNGIIEEK 23 1 0 Unmodified _GPHLANSILFQSSGLTNGIIEEK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.7645 3 809.095573 2424.26489 68535.21 0.77748 0.00062906 -0.067327 -5.4474E-05 0.71015 0.00057458 809.429928783046 811.766798288688 109.9 0.58461 109.9 109.62 110.2 -7.6294E-06 204 36 9 0 0 0 2.801E-09 2 70550 70.174 70.174 1 0.83361 0.84379 0 29072000 15813000 13259000 13842 125 5277 5405 21605;21606 21605 GPHLANSILFQSSGLTNGIIEEK 23 1 0 Unmodified _GPHLANSILFQSSGLTNGIIEEK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.4305 3 809.095573 2424.26489 66755.63 0.7602 0.00061507 0.58811 0.00047584 1.3483 0.0010909 809.430849131792 812.101620141705 120.96 0.41248 120.96 120.8 121.21 0 99 19 8 0 0 0 9.6847E-13 1 71885 95.996 95.996 1 1.1753 0.95366 0 26413000 10961000 15452000 13843 125 5277 5405 21607 21607 GPHLANSILFQSSGLTNGIIEEK 23 1 0 Unmodified _GPHLANSILFQSSGLTNGIIEEK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 809.4323 3 809.095573 2424.26489 67667.15 0.77981 0.00063094 0.8346 0.00067527 1.6144 0.0013062 809.430745899055 812.101594595059 120.69 0.39359 120.69 120.53 120.93 7.6294E-06 76 18 7 0 0 0 0.053915 1 70735 9.2092 6.3273 1 1.1695 0.97304 0 38910000 18232000 20678000 13844 125 5277 5405 21608 21608 GPIAFWAR 8 0 1 Unmodified _GPIAFWAR_ 0 0 0 Q5H909;A0A024R9Y7;Q9UNF1 Q5H909 Q5H909 MAGED2 Melanoma-associated antigen D2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2581 2 459.253237 916.491922 NaN NaN NaN 1.7099 0.00078525 NaN NaN NaN NaN 86.275 0.34899 86.275 86.071 86.42 0 0 0 0 0.043015 1 51875 52.683 36.539 1 NaN NaN 0 6882700 0 6882700 13845 292 5278 5406 21609 21609 GPILLPYQFR 10 0 1 Unmodified _GPILLPYQFR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3486 2 602.347866 1202.68118 79192.73 1.0514 0.00063332 0.035662 2.1481E-05 1.0871 0.00065481 602.347823509255 607.351976662858 108.7 0.72777 108.7 108.43 109.15 7.6294E-06 273 48 8 0 0 0 2.9891E-08 1 67978 119.89 112.41 1 0.94062 1.0506 0 86229000 45013000 41216000 13846 2081 5279 5407 21610 21610 GPILLPYQFR 10 0 1 Unmodified _GPILLPYQFR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.348 2 602.347866 1202.68118 79223.27 0.67577 0.00040705 0.067458 4.0633E-05 0.74322 0.00044768 602.347772603016 607.35193348195 108.07 0.78362 108.07 107.74 108.52 0 310 55 8 0 0 0 3.3245E-08 2 68992 119.21 110.3 1 0.91332 1.0624 0 60154000 31304000 28850000 13847 2081 5279 5407 21611;21612 21611 GPILLPYQFR 10 0 1 Unmodified _GPILLPYQFR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.3515 2 602.347866 1202.68118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.44 1 108.44 107.94 108.94 0 0 0 0 0.034989 1 69407 48.756 28.057 1 13848 2081 5279 5407 21613 21613 GPILLPYQFR 10 0 1 Unmodified _GPILLPYQFR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.3516 2 602.347866 1202.68118 78240.67 0.69084 0.00041612 -0.1951 -0.00011752 0.49574 0.00029861 602.347938644574 607.351571850768 119.66 0.53112 119.66 119.45 119.98 0 130 23 8 0 0 0 0.017454 1 70007 47.849 47.849 1 1.1673 0.95842 0 13788000 6274100 7513900 13849 2081 5279 5407 21614 21614 GPILSFASTR 10 0 1 Unmodified _GPILSFASTR_ 0 0 0 Q6LES9;A8K3S0;Q59GW7;P40937;A8K4Z2;C9JH72;E9PEP3;F5H5S0 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.7932 2 524.792924 1047.57129 85122.96 0.49144 0.00025791 0.017057 8.9511E-06 0.5085 0.00026686 524.792854424073 529.796926016774 78.088 0.64554 78.088 77.787 78.432 0 123 52 4 0 0 0 0.011079 1 46204 52.482 33.751 1 1.2373 1.2831 0 13683000 7646000 6036600 13850 726 5280 5408 21615 21615 GPILSFASTR 10 0 1 Unmodified _GPILSFASTR_ 0 0 0 Q6LES9;A8K3S0;Q59GW7;P40937;A8K4Z2;C9JH72;E9PEP3;F5H5S0 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.7935 2 524.792924 1047.57129 83456.25 0.21725 0.00011401 0.38372 0.00020137 0.60097 0.00031539 524.792994838906 529.797270810779 76.881 0.63462 76.881 76.627 77.262 0 151 50 4 0 0 0 0.0029784 1 46499 66.621 52.464 1 1.0716 1.0597 0 15222000 6938700 8282900 13851 726 5280 5408 21616 21616 GPILSFASTR 10 0 1 Unmodified _GPILSFASTR_ 0 0 0 Q6LES9;A8K3S0;Q59GW7;P40937;A8K4Z2;C9JH72;E9PEP3;F5H5S0 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.7971 2 524.792924 1047.57129 84203.27 0.57833 0.0003035 -0.059014 -3.097E-05 0.51931 0.00027253 524.792868713975 529.79696510179 88.807 0.62509 88.807 88.493 89.118 0 173 41 6 0 0 0 0.0088235 1 48944 55.549 40.399 1 0.89856 0.77988 0 2162100 1133000 1029100 13852 726 5280 5408 21617 21617 GPIPSLFSGQHGPPPYGDSR 20 0 1 Unmodified _GPIPSLFSGQHGPPPYGDSR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.0132 3 689.341189 2065.00174 73200.12 0.37533 0.00025873 0.29516 0.00020347 0.67049 0.0004622 689.34133737808 692.67738329704 101.37 0.68625 101.37 101.05 101.74 0 238 46 7 0 0 0 0.037073 1 57265 14.46 11.02 1 2.1307 1.794 0 4583300 1622200 2961100 13853 2002 5281 5409 21618 21618 GPIPSLFSGQHGPPPYGDSR 20 0 1 Unmodified _GPIPSLFSGQHGPPPYGDSR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.6785 3 689.341189 2065.00174 73772.04 0.43031 0.00029663 0.29329 0.00020218 0.7236 0.00049881 689.67594339253 692.677505194492 101.09 0.6665 101.09 100.81 101.48 -7.6294E-06 197 42 7 0 0 0 6.2266E-05 3 56279 37.624 37.624 1 2.1356 1.8879 0 3812200 1215800 2596400 13854 2002 5281 5409 21619;21620;21621 21619 GPISDALAHHLR 12 0 1 Unmodified _GPISDALAHHLR_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 432.9065 3 429.570316 1285.68912 93010.35 -0.33725 -0.00014487 -0.093789 -4.0289E-05 -0.43104 -0.00018516 429.570465781803 432.906518337526 59.538 0.90679 59.538 59.297 60.203 3.8147E-06 230 62 6 0 0 0 0.0086098 1 30413 36.252 36.252 1 1.6159 1.402 0 2437800 1137100 1300600 13855 878 5282 5410 21622 21622 GPLAAGLGPLVPGK 14 1 0 Unmodified _GPLAAGLGPLVPGK_ 0 0 0 A0A024R8X1;O15525 A0A024R8X1 A0A024R8X1 hCG_1991559;MAFG Transcription factor MafG MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.8798 2 623.87953 1245.74451 78136.81 0.52964 0.00033043 -0.078867 -4.9203E-05 0.45078 0.00028123 623.879280202178 627.886580150006 99.712 0.73777 99.712 99.364 100.1 7.6294E-06 289 61 6 0 0 0 3.2075E-09 2 61009 113.62 67.232 1 1.3552 1.3549 0 26579000 10580000 16000000 13856 262 5283 5411 21623;21624 21624 GPLAAGLGPLVPGK 14 1 0 Unmodified _GPLAAGLGPLVPGK_ 0 0 0 A0A024R8X1;O15525 A0A024R8X1 A0A024R8X1 hCG_1991559;MAFG Transcription factor MafG MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.8794 2 623.87953 1245.74451 77902.66 0.657 0.00040989 -0.24653 -0.00015381 0.41047 0.00025609 623.879273324296 627.886421487206 98.981 0.68095 98.981 98.58 99.261 0 261 56 6 0 0 0 1.1792E-21 2 61906 148.52 102.13 1 1.3945 1.4445 0 33232000 12864000 20368000 13857 262 5283 5411 21625;21626 21626 GPLAAGLGPLVPGK 14 1 0 Unmodified _GPLAAGLGPLVPGK_ 0 0 0 A0A024R8X1;O15525 A0A024R8X1 A0A024R8X1 hCG_1991559;MAFG Transcription factor MafG MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.3887 2 623.87953 1245.74451 77687.93 0.88253 0.0005506 -0.34368 -0.00021441 0.53886 0.00033618 623.879115934864 627.886343421053 112.35 0.53028 112.35 112.1 112.63 -7.6294E-06 136 29 7 0 0 0 0.00013792 2 65161 78.816 52.923 1 1.5972 1.2833 0 7856800 3486400 4370400 13858 262 5283 5411 21627;21628 21627 GPLAAGLGPLVPGK 14 1 0 Unmodified _GPLAAGLGPLVPGK_ 0 0 0 A0A024R8X1;O15525 A0A024R8X1 A0A024R8X1 hCG_1991559;MAFG Transcription factor MafG MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.887 2 623.87953 1245.74451 77812.59 0.61975 0.00038665 -0.05286 -3.2978E-05 0.56689 0.00035367 623.879542249736 627.886511541783 112.15 0.53912 112.15 111.87 112.41 0 132 28 6 0 0 0 3.346E-05 2 64104 95.608 56.303 1 1.5254 1.2428 0 6706200 2690600 4015600 13859 262 5283 5411 21629;21630 21629 GPLEPSEPAVVAAAR 15 0 1 Unmodified _GPLEPSEPAVVAAAR_ 0 0 0 A2IDA3;Q1W6H1;P29372 A2IDA3 A2IDA3 MPG DNA-3-methyladenine glycosylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.3972 2 732.396273 1462.77799 72001.05 0.57257 0.00041935 0.26839 0.00019657 0.84096 0.00061592 732.897911422646 737.400645207612 86.103 0.55109 86.103 85.823 86.374 0 185 38 7 0 0 0 0.00082484 2 47193 49.5 49.5 1 0.5674 0.48073 0 5036500 3293300 1743200 13860 651 5284 5412 21631;21632 21632 GPLEPSEPAVVAAAR 15 0 1 Unmodified _GPLEPSEPAVVAAAR_ 0 0 0 A2IDA3;Q1W6H1;P29372 A2IDA3 A2IDA3 MPG DNA-3-methyladenine glycosylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.4006 2 732.396273 1462.77799 71915.77 0.62862 0.0004604 -0.070232 -5.1437E-05 0.55839 0.00040896 732.396323645352 737.400281184699 86.217 0.55345 86.217 85.932 86.486 7.6294E-06 132 29 7 0 0 0 0.00016316 2 46475 78.653 78.653 1 0.5274 0.4513 0 4496300 2901200 1595000 13861 651 5284 5412 21633;21634 21634 GPLLEDGALSQAVSAGASSPEFTK 24 1 0 Unmodified _GPLLEDGALSQAVSAGASSPEFTK_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;Q05CT2;C9J3G8 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1170.5936 2 1166.58699 2331.15942 56570.75 0.24621 0.00028723 0.02797 3.2629E-05 0.27418 0.00031986 1167.08848056832 1171.0955385532 109.01 0.43961 109.01 108.76 109.2 0 139 26 9 0 0 0 1.7416E-12 2 68039 74.772 70.303 1 1.3666 1.3415 0 20404000 7138400 13265000 13862 1324 5285 5413 21635;21636 21636 GPLLEDGALSQAVSAGASSPEFTK 24 1 0 Unmodified _GPLLEDGALSQAVSAGASSPEFTK_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;Q05CT2;C9J3G8 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1166.5868 2 1166.58699 2331.15942 56471.1 0.0052844 6.1648E-06 0.12431 0.00014502 0.1296 0.00015119 1167.08861766011 1170.5942129809 108.53 0.40683 108.53 108.32 108.72 0 132 25 8 0 0 0 4.3227E-12 1 69402 73.208 55.702 1 1.1789 1.2597 0 21063000 10358000 10705000 13863 1324 5285 5413 21637 21637 GPLLEDGALSQAVSAGASSPEFTK 24 1 0 Unmodified _GPLLEDGALSQAVSAGASSPEFTK_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;Q05CT2;C9J3G8 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1166.5883 2 1166.58699 2331.15942 57119.05 -0.044919 -5.2402E-05 0.42132 0.00049151 0.3764 0.00043911 1167.08897066276 1171.09606296662 120.17 0.39384 120.17 119.97 120.36 7.6294E-06 98 16 9 0 0 0 9.724E-09 2 71240 53.924 46.693 1 1.4017 1.0938 0 12074000 5032900 7040600 13864 1324 5285 5413 21638;21639 21639 GPLLEDGALSQAVSAGASSPEFTK 24 1 0 Unmodified _GPLLEDGALSQAVSAGASSPEFTK_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;Q05CT2;C9J3G8 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1171.0959 2 1166.58699 2331.15942 56697.22 0.33041 0.00038545 0.0048186 5.6213E-06 0.33523 0.00039107 1167.0885280174 1171.09537326569 119.94 0.34972 119.94 119.79 120.14 -7.6294E-06 80 13 9 0 0 0 2.0161E-11 2 70208 63.614 59.146 1 1.3273 1.0821 0 7697800 3432100 4265700 13865 1324 5285 5413 21640;21641 21641 GPLLEEQALTK 11 1 0 Unmodified _GPLLEEQALTK_ 0 0 0 Q52LJ0 Q52LJ0 Q52LJ0 FAM98B Protein FAM98B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.8448 2 599.837528 1197.6605 NaN NaN NaN -1.0563 -0.00063359 NaN NaN NaN NaN 78.918 0.45035 78.918 78.78 79.23 0 0 0 0 0.012027 1 42453 56.563 36.234 1 NaN NaN 0 1199400 0 1199400 13866 1782 5286 5414 21642 21642 GPLLEEQALTK 11 1 0 Unmodified _GPLLEEQALTK_ 0 0 0 Q52LJ0 Q52LJ0 Q52LJ0 FAM98B Protein FAM98B MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.8453 2 599.837528 1197.6605 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.208 1 79.208 78.708 79.708 0 0 0 0 0.00070269 1 41792 72.321 51.45 1 13867 1782 5286 5414 21643 21643 GPLLVSTESHPVK 13 1 0 Unmodified _GPLLVSTESHPVK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.3831 2 682.382634 1362.75072 73726.81 0.66276 0.00045226 0.0060973 4.1607E-06 0.66886 0.00045642 682.382637828185 686.389723800521 43.761 0.73225 43.761 43.445 44.177 0 313 64 7 0 0 0 1.6302E-13 2 23433 130.98 130.98 1 1.0763 1.2094 0 69684000 31633000 38051000 13868 2133 5287 5415 21644;21645 21645 GPLLVSTESHPVK 13 1 0 Unmodified _GPLLVSTESHPVK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3908 2 682.382634 1362.75072 74317.55 0.68289 0.00046599 -0.017264 -1.178E-05 0.66563 0.00045421 682.38263253366 686.389694099858 42.87 0.48209 42.87 42.587 43.069 3.8147E-06 235 39 8 0 0 0 5.1087E-09 1 23086 120.09 120.09 1 1.0665 1.1949 0 111610000 56632000 54978000 13869 2133 5287 5415 21646 21646 GPLLVSTESHPVK 13 1 0 Unmodified _GPLLVSTESHPVK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.2574 3 455.257515 1362.75072 90936.6 0.2692 0.00012255 3.586 0.0016326 3.8552 0.0017551 455.257663714174 458.266315187025 42.853 0.53098 42.853 42.597 43.128 0 145 43 5 0 0 0 0.00023932 1 23182 56.951 56.951 1 2.3176 2.6096 0 122270000 33502000 88767000 13870 2133 5287 5415 21647 21647 GPLLVSTESHPVK 13 1 0 Unmodified _GPLLVSTESHPVK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.3904 2 682.382634 1362.75072 73421.84 0.48696 0.00033229 0.15415 0.00010519 0.64111 0.00043748 682.382791415623 686.389775574077 50.328 0.64638 50.328 50.056 50.702 0 306 53 8 0 0 0 0.00011686 1 24616 76.143 76.143 1 1.2322 0.9577 0 15271000 7032600 8238300 13871 2133 5287 5415 21648 21648 GPLLVSTESHPVK 13 1 0 Unmodified _GPLLVSTESHPVK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.3903 2 682.382634 1362.75072 72611.3 0.30112 0.00020548 0.12995 8.8676E-05 0.43107 0.00029416 682.382705656003 686.389796642549 50.394 0.76405 50.394 50.063 50.827 0 356 62 8 0 0 0 5.4717E-05 2 24090 96.342 96.342 1 1.2562 1.0301 0 12436000 5503400 6932300 13872 2133 5287 5415 21649;21650 21649 GPLMMYISK 9 1 0 2 Oxidation (M) _GPLM(ox)M(ox)YISK_ GPLM(1)M(1)YISK GPLM(72.23)M(72.23)YISK 0 2 0 P13639;Q8TA90;Q6PK56;B4DRE8 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.272 2 536.264296 1070.51404 NaN NaN NaN -0.23923 -0.00012829 NaN NaN NaN NaN 55.486 0.46456 55.486 55.285 55.75 3.8147E-06 0 0 0 0.0012251 1 31201 72.23 48.801 1 NaN NaN 0 5682100 0 5682100 13873 1478 5288 5416 21651 21651 1227;1228 GPLMMYISK 9 1 0 2 Oxidation (M) _GPLM(ox)M(ox)YISK_ GPLM(1)M(1)YISK GPLM(89.7)M(89.7)YISK 0 2 0 P13639;Q8TA90;Q6PK56;B4DRE8 P13639 P13639 EEF2 Elongation factor 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.2725 2 536.264296 1070.51404 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.738 1 54.738 54.238 55.238 0 0 0 0 0.0014938 1 30788 89.698 66.269 1 13874 1478 5288 5416 21652 21652 1227;1228 GPLPAGTILK 10 1 0 Unmodified _GPLPAGTILK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.8026 2 483.80276 965.590967 89560.6 0.39551 0.00019135 -0.37983 -0.00018376 0.015683 7.5876E-06 483.802438176962 487.809677722093 74.335 0.78352 74.335 73.875 74.658 0 203 66 4 0 0 0 0.011915 1 44764 51.346 35.192 1 0.67264 0.67208 0 15207000 7368900 7838400 13875 680 5289 5417 21653 21653 GPLPLSSQHR 10 0 1 Unmodified _GPLPLSSQHR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;D6R8Z5 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.3052 2 546.301447 1090.58834 80659.58 1.011 0.00055232 -0.19195 -0.00010486 0.81907 0.00044746 546.300976526912 551.305375272552 28.625 0.42292 28.625 28.406 28.829 -1.9073E-06 98 25 6 0 0 0 0.015104 1 13495 48.794 48.794 1 1.3801 1.5137 0 53497000 22175000 31321000 13876 542 5290 5418 21654 21654 GPLPLSSQHR 10 0 1 Unmodified _GPLPLSSQHR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;D6R8Z5 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 364.5378 3 364.536724 1090.58834 96875.09 0.50449 0.00018391 -0.14829 -5.4057E-05 0.35621 0.00012985 364.536678041297 367.872736264197 28.638 0.38807 28.638 28.441 28.829 -1.9073E-06 102 22 7 0 0 0 0.00012877 2 13650 72.243 64.2 1 1.3966 1.5507 0 70487000 30190000 40297000 13877 542 5290 5418 21655;21656 21656 GPLPLSSQHR 10 0 1 Unmodified _GPLPLSSQHR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;D6R8Z5 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 364.5366 3 364.536724 1090.58834 99228.88 0.10909 3.9767E-05 0.08975 3.2717E-05 0.19884 7.2484E-05 364.536665028127 367.872743540864 27.842 0.38975 27.842 27.649 28.038 0 122 22 9 0 0 0 0.00012877 2 13085 81.338 74.428 1 1.2084 1.3893 0 76447000 37420000 39027000 13878 542 5290 5418 21657;21658 21658 GPLPLSSQHR 10 0 1 Unmodified _GPLPLSSQHR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;D6R8Z5 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.3057 2 546.301447 1090.58834 80821.36 0.43899 0.00023982 0.30047 0.00016415 0.73947 0.00040397 546.301296174035 551.305561430962 27.863 0.33715 27.863 27.688 28.025 0 81 19 6 0 0 0 3.1005E-06 2 13086 110.41 96.412 1 1.1883 1.3835 0 60731000 25178000 35553000 13879 542 5290 5418 21659;21660 21659 GPLPLSSQHR 10 0 1 Unmodified _GPLPLSSQHR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;D6R8Z5 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 364.5363 3 364.536724 1090.58834 98140.55 -0.10141 -3.6969E-05 -0.092951 -3.3884E-05 -0.19437 -7.0853E-05 364.536678231623 367.872726723861 31.779 0.38639 31.779 31.556 31.942 0 88 20 6 0 0 0 0.048243 1 13523 18.745 15.767 1 0.98213 0.82134 0 3816800 1957500 1859300 13880 542 5290 5418 21661 21661 GPLPLSSQHR 10 0 1 Unmodified _GPLPLSSQHR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;D6R8Z5 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.3015 2 546.301447 1090.58834 82125.86 0.52444 0.0002865 -0.25309 -0.00013826 0.27135 0.00014824 546.30126050804 551.305206319911 31.664 0.56477 31.664 31.42 31.985 0 110 30 6 0 0 0 0.0293 1 12946 43.083 37.993 1 0.95826 0.84787 0 2421400 1203300 1218100 13881 542 5290 5418 21662 21662 GPLQSVQVFGR 11 0 1 Unmodified _GPLQSVQVFGR_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;Q6IPX4 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.3349 2 594.330205 1186.64586 78458.11 0.61301 0.00036433 0.52487 0.00031195 1.1379 0.00067628 594.330490096342 599.334661138127 83.887 1.0914 83.887 83.369 84.46 7.6294E-06 573 86 9 0 0 0 4.156E-10 3 50022 131.44 116.77 1 1.037 1.2294 0 545450000 265350000 280100000 13882 1636 5291 5419 21663;21664;21665 21664 GPLQSVQVFGR 11 0 1 Unmodified _GPLQSVQVFGR_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;Q6IPX4 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.3348 2 594.330205 1186.64586 78217.35 0.57943 0.00034437 0.38265 0.00022742 0.96208 0.00057179 594.330399906527 599.33451028301 82.727 0.98885 82.727 82.365 83.354 0 538 78 11 0 0 0 2.7201E-08 2 50506 121.09 106.43 1 0.99228 1.161 0 638820000 313620000 325200000 13883 1636 5291 5419 21666;21667 21667 GPLQSVQVFGR 11 0 1 Unmodified _GPLQSVQVFGR_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;Q6IPX4 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.3348 2 594.330205 1186.64586 77327.18 0.75483 0.00044862 0.025299 1.5036E-05 0.78013 0.00046365 594.3302245382 599.334351010596 95.978 0.96472 95.978 95.607 96.572 0 385 63 9 0 0 0 1.2424E-16 2 53660 152.34 140.63 1 0.9891 0.85313 0 76184000 40377000 35807000 13884 1636 5291 5419 21668;21669 21668 GPLQSVQVFGR 11 0 1 Unmodified _GPLQSVQVFGR_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;Q6IPX4 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.3301 2 594.330205 1186.64586 77841.74 0.46159 0.00027434 0.433 0.00025734 0.89459 0.00053168 594.330463724438 599.334580189563 95.829 0.87362 95.829 95.47 96.344 -7.6294E-06 369 57 9 0 0 0 1.8459E-05 2 52748 105.52 105.52 1 0.93752 0.81808 0 62891000 31755000 31136000 13885 1636 5291 5419 21670;21671 21671 GPLSQEALMELFPK 14 1 0 Oxidation (M) _GPLSQEALM(ox)ELFPK_ GPLSQEALM(1)ELFPK GPLSQEALM(93.84)ELFPK 0 1 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.4074 2 788.407992 1574.80143 67957.3 0.80726 0.00063645 0.19265 0.00015189 0.99991 0.00078833 788.407743453264 792.414639019273 116.71 0.63943 116.71 116.37 117.01 0 215 43 7 0 0 0 2.183E-05 2 74546 93.839 93.839 1 1.5653 1.5467 0 25615000 8639300 16976000 13886 1412 5292 5420 21672;21673 21673 1103 GPLTVEETPR 10 0 1 Unmodified _GPLTVEETPR_ 0 0 0 Q14676;B4DYH4;A2AB05;A1Z5I7;A1Z5I6 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.7972 2 549.793121 1097.57169 85232.47 0.73813 0.00040582 -0.31029 -0.0001706 0.42784 0.00023522 549.792898107129 554.797370643567 44.202 0.42952 44.202 43.984 44.413 0 120 37 5 0 0 0 0.016852 1 23659 48.091 32.94 1 1.0191 1.0666 0 10819000 5263800 5555300 13887 1738 5293 5421 21674 21674 GPLTVEETPR 10 0 1 Unmodified _GPLTVEETPR_ 0 0 0 Q14676;B4DYH4;A2AB05;A1Z5I7;A1Z5I6 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.7976 2 549.793121 1097.57169 83966.9 0.59917 0.00032942 -1.2384 -0.00068084 -0.63919 -0.00035142 549.793220323092 554.797141782188 43.498 0.52392 43.498 43.226 43.75 0 145 42 6 0 0 0 0.0014554 1 23598 73.573 58.708 1 0.83182 0.84726 0 20571000 13101000 7469800 13888 1738 5293 5421 21675 21675 GPLVLPAGGGAQDESGSR 18 0 1 Unmodified _GPLVLPAGGGAQDESGSR_ 0 0 0 J3KNX4;D6W5Y8;A0A0D9SGJ8;Q2TAK8;Q13108;K7EP97 J3KNX4 J3KNX4 MUM1;MUM-1 PWWP domain-containing protein MUM1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.4221 2 834.421007 1666.82746 66959.35 0.59701 0.00049816 0.53255 0.00044437 1.1296 0.00094253 834.42168682653 839.425702496195 74.798 0.40169 74.798 74.586 74.988 -7.6294E-06 93 29 4 0 0 0 0.014891 1 39709 29.341 29.341 1 1.6838 1.4613 0 2156800 877390 1279400 13889 529 5294 5422 21676 21676 GPLVPFPNQK 10 1 0 Unmodified _GPLVPFPNQK_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.8194 2 548.811116 1095.60768 84916.55 0.67934 0.00037283 0.78675 0.00043178 1.4661 0.00080461 548.811098971791 552.818815770076 76.079 0.68298 76.079 75.605 76.288 0 169 57 4 0 0 0 0.0087304 2 44757 55.676 52.941 1 1.7477 1.8172 0 16915000 6883900 10031000 13890 505 5295 5423 21677;21678 21677 GPLVPFPNQK 10 1 0 Unmodified _GPLVPFPNQK_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.8116 2 548.811116 1095.60768 84025.63 0.29497 0.00016188 1.047 0.00057458 1.3419 0.00073646 548.811234340469 552.819303152073 74.892 0.48396 74.892 74.658 75.142 7.6294E-06 161 42 5 0 0 0 0.0011672 1 45143 75.109 65.752 1 1.8923 1.9298 0 17114000 6150800 10963000 13891 505 5295 5423 21679 21679 GPLVPFPNQK 10 1 0 Unmodified _GPLVPFPNQK_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.8185 2 548.811116 1095.60768 82875.5 0.37777 0.00020732 0.53571 0.000294 0.91347 0.00050132 548.811106534209 552.818447578052 86.39 0.78322 86.39 85.906 86.689 0 205 53 6 0 0 0 0.009559 1 47483 54.549 54.549 1 2.9505 2.2989 0 3742800 1026900 2715900 13892 505 5295 5423 21680 21680 GPLVPFPNQK 10 1 0 Unmodified _GPLVPFPNQK_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 552.8187 2 548.811116 1095.60768 83976.2 0.5302 0.00029098 0.4109 0.0002255 0.94109 0.00051648 548.811040742044 552.818315372998 86.409 0.77153 86.409 85.984 86.755 0 169 44 6 0 0 0 0.048711 1 46571 36.395 36.395 1 3.1281 2.4489 0 3362000 715610 2646400 13893 505 5295 5423 21681 21681 GPPDFSSDEEREPTPVLGSGAAAAGR 26 0 2 Unmodified _GPPDFSSDEEREPTPVLGSGAAAAGR_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.4164 3 857.408767 2569.20447 64353.59 0.80529 0.00069046 -0.12803 -0.00010977 0.67726 0.00058069 857.742884914245 864.080724531026 75.016 0.67313 75.016 74.705 75.378 -7.6294E-06 424 54 10 0 0 0 4.3523E-69 2 44184 172.8 172.8 1 1.4777 1.6107 0 109930000 44082000 65844000 13894 334;1562 5296 5424 21682;21683 21682 GPPDFSSDEEREPTPVLGSGAAAAGR 26 0 2 Unmodified _GPPDFSSDEEREPTPVLGSGAAAAGR_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 864.4155 3 857.408767 2569.20447 64866.99 0.64802 0.00055562 -0.028425 -2.4372E-05 0.61959 0.00053125 857.742964744302 864.415191944448 74.026 0.71849 74.026 73.645 74.363 -7.6294E-06 442 58 10 0 0 0 5.3268E-28 3 44578 117.82 117.82 1 1.3992 1.6386 0 117050000 52652000 64399000 13895 334;1562 5296 5424 21684;21685;21686 21685 GPPDFSSDEEREPTPVLGSGAAAAGR 26 0 2 Unmodified _GPPDFSSDEEREPTPVLGSGAAAAGR_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 857.7436 3 857.408767 2569.20447 63686.51 0.50769 0.0004353 1.4776 0.0012669 1.9853 0.0017022 857.743955922063 864.416475742186 85.628 1.0244 85.628 85.013 86.037 0 386 63 10 0 0 0 1.3684E-12 3 47003 69.619 69.619 1 1.6194 1.3448 0 19215000 7468000 11747000 13896 334;1562 5296 5424 21687;21688;21689 21689 GPPDFSSDEEREPTPVLGSGAAAAGR 26 0 2 Unmodified _GPPDFSSDEEREPTPVLGSGAAAAGR_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 857.744 3 857.408767 2569.20447 64206.63 0.53429 0.00045811 0.81388 0.00069783 1.3482 0.0011559 857.743824796494 864.416585008681 85.84 0.87376 85.84 85.333 86.207 0 333 50 11 0 0 0 1.539E-13 2 46219 78.837 78.837 1 1.6038 1.4784 0 15933000 6345900 9586600 13897 334;1562 5296 5424 21690;21691 21691 GPPEPPPVQLELEDK 15 1 0 Unmodified _GPPEPPPVQLELEDK_ 0 0 0 Q8IY37 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.9351 2 822.927603 1643.84065 67599.86 1.0452 0.0008601 -0.10485 -8.6283E-05 0.94032 0.00077382 822.927803179777 826.934657763323 91.254 0.52509 91.254 91.054 91.579 0 129 42 4 0 0 0 0.00073709 2 55289 51.092 51.092 1 1.0797 1.1299 0 15130000 8840500 6289400 13898 1897 5297 5425 21692;21693 21693 GPPEPPPVQLELEDK 15 1 0 Unmodified _GPPEPPPVQLELEDK_ 0 0 0 Q8IY37 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 823.4302 2 822.927603 1643.84065 68677.6 0.80251 0.00066041 -0.081121 -6.6757E-05 0.72139 0.00059365 822.927488441789 826.934554828383 104.69 0.61557 104.69 104.37 104.99 0 176 36 7 0 0 0 0.00082484 2 59591 49.5 49.5 1 1.0432 0.82568 0 5005200 2682900 2322300 13899 1897 5297 5425 21694;21695 21694 GPPEPPPVQLELEDK 15 1 0 Unmodified _GPPEPPPVQLELEDK_ 0 0 0 Q8IY37 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 823.4316 2 822.927603 1643.84065 68184.86 0.62896 0.00051759 0.099895 8.2206E-05 0.72886 0.0005998 823.430010019307 826.934512189838 104.45 0.64474 104.45 104.17 104.82 0 182 37 8 0 0 0 0.0044679 1 58531 39.148 39.148 1 1.1614 0.95086 0 4902600 2393800 2508800 13900 1897 5297 5425 21696 21696 GPPGPALPATMNNSSSETR 19 0 1 Oxidation (M) _GPPGPALPATM(ox)NNSSSETR_ GPPGPALPATM(1)NNSSSETR GPPGPALPATM(81.49)NNSSSETR 0 1 0 A8K4T8;Q15003;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.4525 2 950.446896 1898.87924 62217.45 0.54518 0.00051816 -0.26543 -0.00025228 0.27975 0.00026588 950.446700296958 955.450881240743 46.121 0.59319 46.121 45.867 46.46 -3.8147E-06 318 52 8 0 0 0 2.0485E-06 2 24790 81.494 81.494 1 0.98286 1.0924 0 73859000 39072000 34787000 13901 740 5298 5426 21697;21698 21698 575 GPPGPALPATMNNSSSETR 19 0 1 Oxidation (M) _GPPGPALPATM(ox)NNSSSETR_ GPPGPALPATM(1)NNSSSETR GPPGPALPATM(85.84)NNSSSETR 0 1 0 A8K4T8;Q15003;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 955.4497 2 950.446896 1898.87924 62596.81 0.34317 0.00032617 -0.17236 -0.00016382 0.17081 0.00016235 950.446704107438 955.451001136392 45.12 0.5453 45.12 44.881 45.426 0 296 47 8 0 0 0 5.6961E-07 2 24629 85.845 85.845 1 1.0015 1.1435 0 91571000 45813000 45758000 13902 740 5298 5426 21699;21700 21700 575 GPPGPALPATMNNSSSETR 19 0 1 Unmodified _GPPGPALPATMNNSSSETR_ 0 0 0 A8K4T8;Q15003;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 947.455 2 942.449439 1882.88432 64348.31 0.4341 0.00040912 -0.81912 -0.00077198 -0.38502 -0.00036286 942.95013037992 947.452515015215 72.115 0.67906 72.115 71.704 72.383 0 180 52 6 0 0 0 0.00039963 1 37982 42.095 42.095 1 2.1196 1.776 0 4035300 1669300 2366000 13903 740 5298 5427 21701 21701 GPPPSWGR 8 0 1 Unmodified _GPPPSWGR_ 0 0 0 B2R6F3;P84103 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.2192 2 427.219395 852.424236 91724.7 0.052316 2.2351E-05 0.13543 5.7858E-05 0.18775 8.0209E-05 427.219176406177 432.223380007969 27.939 0.85799 27.939 27.682 28.54 0 224 59 6 0 0 0 0.0033502 2 13140 97.068 91.024 1 1.3162 1.3465 0 32050000 12927000 19124000 13904 841 5299 5428 21702;21703 21702 GPPPSWGR 8 0 1 Unmodified _GPPPSWGR_ 0 0 0 B2R6F3;P84103 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.2195 2 427.219395 852.424236 91317.8 -0.32931 -0.00014069 -0.49235 -0.00021034 -0.82166 -0.00035103 427.219301226142 432.222849092208 27.5 0.92727 27.5 27.167 28.095 1.9073E-06 184 51 6 0 0 0 0.0078194 2 12832 81.297 81.297 1 1.4288 1.5616 0 36397000 14345000 22052000 13905 841 5299 5428 21704;21705 21705 GPQITGPSLEGDLGLK 16 1 0 Unmodified _GPQITGPSLEGDLGLK_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.4377 2 791.42777 1580.84099 NaN NaN NaN -0.31817 -0.00025181 NaN NaN NaN NaN 100.16 0.69022 100.16 99.91 100.6 0 0 0 0 0.0021355 1 61287 61.11 41.979 1 NaN NaN 0 16049000 0 16049000 13906 1696 5300 5429 21706 21706 GPQITGPSLEGDLGLK 16 1 0 Unmodified _GPQITGPSLEGDLGLK_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.4362 2 791.42777 1580.84099 NaN NaN NaN -0.24672 -0.00019526 NaN NaN NaN NaN 99.519 0.58595 99.519 99.261 99.847 0 0 0 0 0.00019769 1 62295 71.888 57.73 1 NaN NaN 0 20298000 0 20298000 13907 1696 5300 5429 21707 21707 GPQLVCTGSDDGTVK 15 1 0 Unmodified _GPQLVCTGSDDGTVK_ 0 0 0 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.3737 2 767.364312 1532.71407 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.388 1 43.388 42.888 43.888 0 0 0 0 0.012502 1 23541 45.257 35.252 1 13908 643 5301 5430 21708 21708 GPQLVCTGSDDGTVK 15 1 0 Unmodified _GPQLVCTGSDDGTVK_ 0 0 0 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.3639 2 767.364312 1532.71407 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.469 1 43.469 42.969 43.969 3.8147E-06 0 0 0 0.0015724 1 23601 70.685 55.055 1 13909 643 5301 5430 21709 21709 GPQNAFFLVK 10 1 0 Unmodified _GPQNAFFLVK_ 0 0 0 H0YE88;P28347;E9PKB7;Q59EF3 H0YE88 H0YE88 TEAD1 Transcriptional enhancer factor TEF-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.8122 2 560.811116 1119.60768 84150.52 0.84864 0.00047593 0.18799 0.00010542 1.0366 0.00058135 560.811226756837 564.8186876212 91.543 0.46329 91.543 91.281 91.744 0 99 35 4 0 0 0 0.00013321 2 55394 96.253 85.387 1 0.71684 0.73459 0 10583000 5769600 4813800 13910 1291 5302 5431 21710;21711 21711 GPQNAFFLVK 10 1 0 Unmodified _GPQNAFFLVK_ 0 0 0 H0YE88;P28347;E9PKB7;Q59EF3 H0YE88 H0YE88 TEAD1 Transcriptional enhancer factor TEF-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.811 2 560.811116 1119.60768 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.452 1 90.452 89.952 90.952 0 0 0 0 2.6887E-17 1 55921 136.16 103.31 1 13911 1291 5302 5431 21712 21712 GPQNAFFLVK 10 1 0 Unmodified _GPQNAFFLVK_ 0 0 0 H0YE88;P28347;E9PKB7;Q59EF3 H0YE88 H0YE88 TEAD1 Transcriptional enhancer factor TEF-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.8186 2 560.811116 1119.60768 81919.21 0.62614 0.00035115 -0.14106 -7.9106E-05 0.48509 0.00027204 560.810922791673 564.818068550635 104.85 0.97974 104.85 104.17 105.15 0 223 59 6 0 0 0 0.0109 2 59651 65.88 65.88 1 0.96987 0.76827 0 4904500 2409100 2495400 13912 1291 5302 5431 21713;21714 21713 GPQNAFFLVK 10 1 0 Unmodified _GPQNAFFLVK_ 0 0 0 H0YE88;P28347;E9PKB7;Q59EF3 H0YE88 H0YE88 TEAD1 Transcriptional enhancer factor TEF-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.8112 2 560.811116 1119.60768 81016.8 0.49462 0.00027739 0.07823 4.3872E-05 0.57285 0.00032126 560.810974081863 564.818126066979 104.59 0.72224 104.59 104.16 104.88 7.6294E-06 187 42 6 0 0 0 0.00013321 3 58602 96.253 80.05 1 0.97047 0.79547 0 5034100 2789900 2244200 13913 1291 5302 5431 21715;21716;21717 21717 GPQPPTVSPIR 11 0 1 Unmodified _GPQPPTVSPIR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.8252 2 574.824755 1147.63496 79458.73 0.76469 0.00043956 -0.018263 -1.0498E-05 0.74642 0.00042906 574.824685591432 579.828854263951 54.382 0.71013 54.382 54.045 54.756 0 305 61 7 0 0 0 0.00077159 2 30452 72.607 64.075 1 1.4214 1.5813 0 76998000 33169000 43829000 13914 1570 5303 5432 21718;21719 21719 GPQPPTVSPIR 11 0 1 Unmodified _GPQPPTVSPIR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.8242 2 574.824755 1147.63496 80567.95 0.35942 0.0002066 -0.33706 -0.00019375 0.02236 1.2853E-05 574.824463450222 579.828707795395 53.452 0.92016 53.452 52.916 53.836 3.8147E-06 384 85 6 0 0 0 0.0017859 3 30468 64.841 55.483 1 1.5153 1.699 0 45357000 19520000 25837000 13915 1570 5303 5432 21720;21721;21722 21722 GPQSLFNAPR 10 0 1 Unmodified _GPQSLFNAPR_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.7886 2 543.788173 1085.56179 83846.18 0.94389 0.00051327 0.27776 0.00015104 1.2216 0.00066431 543.788115153133 548.792133290338 60.508 0.4374 60.508 60.281 60.719 3.8147E-06 193 41 6 0 0 0 3.9802E-08 2 34456 117.89 104.12 1 0.91617 0.94868 0 37464000 18901000 18562000 13916 1570 5304 5433 21723;21724 21724 GPQSLFNAPR 10 0 1 Unmodified _GPQSLFNAPR_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.7885 2 543.788173 1085.56179 81352.95 0.57533 0.00031286 0.37994 0.00020661 0.95527 0.00051947 543.788150156096 548.792299062627 59.214 0.43191 59.214 59.014 59.446 3.8147E-06 171 38 6 0 0 0 2.6602E-09 2 34401 126.62 114.34 1 1.0101 1.1451 0 48215000 24035000 24180000 13917 1570 5304 5433 21725;21726 21726 GPQSLFNAPR 10 0 1 Unmodified _GPQSLFNAPR_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.793 2 543.788173 1085.56179 86688.66 0.34557 0.00018792 0.82857 0.00045056 1.1741 0.00063848 543.788464449479 548.79244780385 69.998 0.39722 69.998 69.823 70.22 0 145 35 6 0 0 0 0.0009809 2 36678 78.113 71.217 1 1.2143 1.0371 0 5746800 2666800 3080100 13918 1570 5304 5433 21727;21728 21727 GPQSLFNAPR 10 0 1 Unmodified _GPQSLFNAPR_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.7925 2 543.788173 1085.56179 83127.32 0.27999 0.00015226 0.99755 0.00054246 1.2775 0.00069471 543.788413206286 548.792488890648 70.44 0.38718 70.44 70.266 70.653 0 111 33 4 0 0 0 0.0017496 2 36189 72.23 68.308 1 1.2458 1.0384 0 4988200 1998800 2989400 13919 1570 5304 5433 21729;21730 21730 GPSGGGEEPALSQYQR 16 0 1 Unmodified _GPSGGGEEPALSQYQR_ 0 0 0 B7Z5I6;J3KMX1;Q99567 B7Z5I6 B7Z5I6 NUP88 Nuclear pore complex protein Nup88 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.8849 2 816.884258 1631.75396 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.167 1 42.167 41.667 42.667 0 0 0 0 0.0010489 1 22708 70.089 53.064 1 13920 1095 5305 5434 21731 21731 GPSGLLTYTGK 11 1 0 Unmodified _GPSGLLTYTGK_ 0 0 0 H7C0R7;Q9UHQ9 H7C0R7 H7C0R7 CYB5R1 NADH-cytochrome b5 reductase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.3058 2 547.298039 1092.58152 NaN NaN NaN 0.79472 0.00043495 NaN NaN NaN NaN 61.514 0.93155 61.514 61.312 62.244 0 0 0 0 3.4347E-12 1 35146 127.76 94.924 1 NaN NaN 0 14454000 0 14454000 13921 1315 5306 5435 21732 21732 GPSGLLTYTGK 11 1 0 Unmodified _GPSGLLTYTGK_ 0 0 0 H7C0R7;Q9UHQ9 H7C0R7 H7C0R7 CYB5R1 NADH-cytochrome b5 reductase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.3055 2 547.298039 1092.58152 84587.46 0.19333 0.00010581 1.2416 0.0006795 1.4349 0.00078531 547.799958805455 551.305590840773 70.992 0.57391 70.992 70.801 71.375 0 73 36 5 0 0 0 0.049463 1 37298 34.773 29.832 1 2.3322 1.977 0 1471500 532310 939190 13922 1315 5306 5435 21733 21733 GPSGLLTYTGK 11 1 0 Unmodified _GPSGLLTYTGK_ 0 0 0 H7C0R7;Q9UHQ9 H7C0R7 H7C0R7 CYB5R1 NADH-cytochrome b5 reductase 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.3056 2 547.298039 1092.58152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.471 1 71.471 70.971 71.971 0 0 0 0 0.019486 1 36865 53.751 41.982 1 13923 1315 5306 5435 21734 21734 GPSGLLVYQGK 11 1 0 Unmodified _GPSGLLVYQGK_ 0 0 0 A0A024R4X0;P00387;B1AHF3;Q6ZVI6 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.8143 2 559.813856 1117.61316 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.874 1 63.874 63.374 64.374 0 0 0 0 0.0099874 1 36664 59.153 40.928 1 13924 164 5307 5436 21735 21735 GPSGLLVYQGK 11 1 0 Unmodified _GPSGLLVYQGK_ 0 0 0 A0A024R4X0;P00387;B1AHF3;Q6ZVI6 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.821 2 559.813856 1117.61316 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.96 1 63.96 63.46 64.46 0 0 0 0 0.00062325 1 36715 73.573 48.65 1 13925 164 5307 5436 21736 21736 GPSGLLVYQGK 11 1 0 Unmodified _GPSGLLVYQGK_ 0 0 0 A0A024R4X0;P00387;B1AHF3;Q6ZVI6 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.8214 2 559.813856 1117.61316 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.364 1 62.364 61.864 62.864 0 0 0 0 2.0667E-05 1 36579 90.601 61.452 1 13926 164 5307 5436 21737 21737 GPSGLLVYQGK 11 1 0 Unmodified _GPSGLLVYQGK_ 0 0 0 A0A024R4X0;P00387;B1AHF3;Q6ZVI6 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.8135 2 559.813856 1117.61316 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.129 1 73.129 72.629 73.629 0 0 0 0 0.0029576 1 38661 67.494 39.969 1 13927 164 5307 5436 21738 21738 GPSPFSPVQLHQLR 14 0 1 Unmodified _GPSPFSPVQLHQLR_ 0 0 0 P51531;A0A0U1RQZ9;F6VDE0;A0A0A0MT03;A0A1B0GWA8;A0A1B0GU54;Q56A76;F6RS74 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.9557 3 521.619447 1561.83651 84826.14 0.57571 0.0003003 -0.77697 -0.00040528 -0.20125 -0.00010498 521.619541307083 525.288878475291 77.578 0.61636 77.578 77.321 77.938 -7.6294E-06 131 50 5 0 0 0 0.036192 1 47013 20.648 20.648 1 1.2205 1.2627 0 21711000 8452800 13258000 13928 1595 5308 5437 21739 21739 GPSSVEDIK 9 1 0 Unmodified _GPSSVEDIK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;A0A024R3V9;Q9NX34 A0A0S2Z4G7;Q9NX34 A0A0S2Z4G7 NPM1;hCG_37498 Nucleophosmin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.2469 2 466.24019 930.465826 NaN NaN NaN -0.80472 -0.00037519 NaN NaN NaN NaN 26.392 0.76948 26.392 26.157 26.926 -1.9073E-06 0 0 0 5.947E-05 1 11736 103.56 73.378 1 NaN NaN 0 445240000 0 445240000 13929 559;2078 5309 5438 21740 21740 GPSSVEDIK 9 1 0 Unmodified _GPSSVEDIK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;A0A024R3V9;Q9NX34 A0A0S2Z4G7;Q9NX34 A0A0S2Z4G7 NPM1;hCG_37498 Nucleophosmin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2401 2 466.24019 930.465826 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.493 1 26.493 25.993 26.993 -1.9073E-06 0 0 0 0.0018597 1 11903 89.698 60.549 1 13930 559;2078 5309 5438 21741 21741 GPSSVEDIK 9 1 0 Unmodified _GPSSVEDIK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;A0A024R3V9;Q9NX34 A0A0S2Z4G7;Q9NX34 A0A0S2Z4G7 NPM1;hCG_37498 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 466.2402 2 466.24019 930.465826 87802.01 0.11246 5.2432E-05 -0.17536 -8.1761E-05 -0.062906 -2.9329E-05 466.240011284081 470.246999099214 29.953 1.017 29.953 29.656 30.673 0 331 70 10 0 0 0 0.0020277 2 12255 77.732 62.293 1 0.61204 0.51992 0 61538000 38826000 22712000 13931 559;2078 5309 5438 21742;21743 21743 GPSSVEDIK 9 1 0 Unmodified _GPSSVEDIK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;A0A024R3V9;Q9NX34 A0A0S2Z4G7;Q9NX34 A0A0S2Z4G7 NPM1;hCG_37498 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 470.2473 2 466.24019 930.465826 87362.2 -0.12036 -5.6115E-05 0.3226 0.00015041 0.20225 9.4295E-05 466.240308799207 470.247154793001 30.053 0.77016 30.053 29.792 30.562 0 242 48 9 0 0 0 0.0010522 2 11805 90.657 71.02 1 0.58131 0.48892 0 51198000 31853000 19346000 13932 559;2078 5309 5438 21744;21745 21744 GPSWDPFR 8 0 1 Unmodified _GPSWDPFR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.2343 2 481.229959 960.445365 86944.49 0.32165 0.00015479 0.2566 0.00012348 0.57825 0.00027827 481.229937381208 486.234123830627 84.986 0.80676 84.986 84.46 85.267 0 354 67 8 0 0 0 0.0090807 1 50874 75.854 65.44 1 1.2065 1.3605 0 99146000 47328000 51817000 13933 1443 5310 5439 21746 21746 GPSWDPFR 8 0 1 Unmodified _GPSWDPFR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.2341 2 481.229959 960.445365 86931.16 0.57349 0.00027598 0.12988 6.2501E-05 0.70336 0.00033848 481.229942129066 486.23402322253 83.855 0.84163 83.855 83.401 84.242 0 327 68 7 0 0 0 0.0058564 2 51362 89.142 53.092 1 1.2221 1.3919 0 107060000 54921000 52137000 13934 1443 5310 5439 21747;21748 21748 GPSWDPFR 8 0 1 Unmodified _GPSWDPFR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.23 2 481.229959 960.445365 NaN NaN NaN 0.061148 2.9426E-05 NaN NaN NaN NaN 96.804 0.63995 96.804 96.539 97.179 0 0 0 0 0.048057 1 54391 50.703 29.403 1 NaN NaN 0 1585700 1585700 0 13935 1443 5310 5439 21749 21749 GPSWDPFR 8 0 1 Unmodified _GPSWDPFR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.2339 2 481.229959 960.445365 88524.11 0.15531 7.4739E-05 0.010445 5.0262E-06 0.16575 7.9766E-05 481.229869893928 486.234011543527 96.661 0.69892 96.661 96.416 97.115 0 150 34 6 0 0 0 0.048223 1 53414 44.395 24.758 1 1.1838 1.0127 0 3279400 1379500 1899900 13936 1443 5310 5439 21750 21750 GPTEADELMK 10 1 0 Oxidation (M) _GPTEADELM(ox)K_ GPTEADELM(1)K GPTEADELM(67.99)K 0 1 0 Q2VF42;Q2Q9H2;Q2Q9B7;A8K8D9;P11413;Q0PHS4 Q2VF42 Q2VF42 G6PD Glucose-6-phosphate 1-dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.7623 2 553.755346 1105.49614 NaN NaN NaN -0.023054 -1.2766E-05 NaN NaN NaN NaN 25.118 0.37859 25.118 24.994 25.372 0 0 0 0 0.0017528 2 10811 67.993 38.844 1 NaN NaN 0 4161100 0 4161100 13937 775 5311 5440 21751;21752 21752 606 GPTPATPESFSK 12 1 0 Unmodified _GPTPATPESFSK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.8008 2 609.803685 1217.59282 76810.34 0.64725 0.0003947 -1.1173 -0.00068132 -0.47003 -0.00028662 609.802240224116 613.810784815869 41.113 0.46399 41.113 40.89 41.354 0 81 36 5 0 0 0 0.043261 1 21678 33.744 33.744 1 0.63804 0.65299 0 10539000 5555400 4983300 13938 1581 5312 5441 21753 21753 GPTPFNQNQLHQLR 14 0 1 Unmodified _GPTPFNQNQLHQLR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.2928 3 550.621739 1648.84339 81601.12 0.58639 0.00032288 -0.096383 -5.3071E-05 0.49 0.00026981 550.62168095293 553.957628829679 56.469 0.47413 56.469 56.272 56.746 0 262 41 10 0 0 0 7.4272E-10 2 31750 89.959 83.206 1 0.78835 0.87235 0 60544000 36332000 24211000 13939 695 5313 5442 21754;21755 21754 GPTPFNQNQLHQLR 14 0 1 Unmodified _GPTPFNQNQLHQLR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.2923 3 550.621739 1648.84339 80802.47 0.31307 0.00017238 -0.42923 -0.00023634 -0.11616 -6.3959E-05 550.956091712414 553.957670892312 55.238 0.52973 55.238 54.981 55.51 3.8147E-06 216 38 8 0 0 0 1.061E-09 2 31567 94.122 85.997 1 0.83331 0.95194 0 90539000 52644000 37895000 13940 695 5313 5442 21756;21757 21756 GPTPFNQNQLHQLR 14 0 1 Unmodified _GPTPFNQNQLHQLR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.2905 3 550.621739 1648.84339 NaN NaN NaN -0.69324 -0.00038171 NaN NaN NaN NaN 66.14 0.53925 66.14 65.838 66.377 0 0 0 0 0.030875 1 34162 30.867 15.629 1 NaN NaN 0 4808200 0 4808200 13941 695 5313 5442 21758 21758 GPTVSNIR 8 0 1 Unmodified _GPTVSNIR_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.2376 2 422.237784 842.461016 92625.01 -0.18525 -7.8221E-05 -0.19406 -8.1941E-05 -0.37932 -0.00016016 422.237716268517 427.241844403562 24.894 0.85093 24.894 24.479 25.33 0 142 40 7 0 0 0 0.0019563 2 10641 104.21 77.079 1 0.84621 0.94134 0 76683000 41361000 35322000 13942 773 5314 5443 21759;21760 21760 GPTVSNIR 8 0 1 Unmodified _GPTVSNIR_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.2376 2 422.237784 842.461016 92336.05 0.3119 0.0001317 0.028293 1.1946E-05 0.34019 0.00014364 422.237692226507 427.241859797401 24.677 0.65124 24.677 24.36 25.012 0 109 30 7 0 0 0 0.0010332 2 10298 113.7 81.741 1 0.94597 1.1016 0 60965000 32218000 28747000 13943 773 5314 5443 21761;21762 21761 GPTVSNIR 8 0 1 Unmodified _GPTVSNIR_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 422.2378 2 422.237784 842.461016 93095.2 -0.28724 -0.00012129 0.38558 0.00016281 0.098336 4.1521E-05 422.237792067351 427.241921996488 27.407 0.77918 27.407 26.894 27.673 1.9073E-06 144 36 7 0 0 0 0.057022 1 10586 41.188 19.057 1 0.97898 0.84286 0 7373600 3854000 3519700 13944 773 5314 5443 21763 21763 GPTVSNIR 8 0 1 Unmodified _GPTVSNIR_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 422.2377 2 422.237784 842.461016 92440.23 -0.69867 -0.00029501 0.92186 0.00038925 0.22319 9.424E-05 422.238179704367 427.242103549406 27.367 0.5268 27.367 27.168 27.695 -1.9073E-06 86 20 6 0 0 0 0.041527 2 10132 46.835 22.636 1 0.97459 0.86192 0 4029300 1987300 2042100 13945 773 5314 5443 21764;21765 21765 GPVEGYEENEEFLR 14 0 1 Unmodified _GPVEGYEENEEFLR_ 0 0 0 F5GX77;A0A024R565;Q9UI30;F5GYQ2 F5GX77 F5GX77 TRMT112;HSPC152 Multifunctional methyltransferase subunit TRM112-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.3845 2 834.381017 1666.74748 66516.73 0.4719 0.00039375 -0.61988 -0.00051722 -0.14798 -0.00012347 834.380126252432 839.384638347035 76.744 0.60167 76.744 76.441 77.043 0 178 45 6 0 0 0 6.1681E-21 2 46311 171.92 168.42 1 1.8612 2.039 0 31465000 13322000 18143000 13946 170 5315 5444 21766;21767 21766 GPVEGYEENEEFLR 14 0 1 Unmodified _GPVEGYEENEEFLR_ 0 0 0 F5GX77;A0A024R565;Q9UI30;F5GYQ2 F5GX77 F5GX77 TRMT112;HSPC152 Multifunctional methyltransferase subunit TRM112-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 839.3859 2 834.381017 1666.74748 67143.68 0.40606 0.0003388 -0.76618 -0.00063929 -0.36013 -0.00030049 834.880507258295 839.385040583468 89.026 0.49495 89.026 88.78 89.275 0 118 31 6 0 0 0 0.0065042 1 48337 53.569 53.569 1 2.4723 2.1691 0 3593000 1265300 2327700 13947 170 5315 5444 21768 21768 GPVFAPPYEPLPENVK 16 1 0 Unmodified _GPVFAPPYEPLPENVK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.9634 2 877.461613 1752.90867 64314.31 0.63258 0.00055507 0.16209 0.00014223 0.79467 0.0006973 877.963298916453 881.468733666125 105.04 0.94026 105.04 104.69 105.63 7.6294E-06 621 73 11 0 0 0 0.00015598 3 64837 73.781 73.781 1 1.1124 1.3177 0 457120000 220060000 237060000 13948 1470 5316 5445 21769;21770;21771 21770 GPVFAPPYEPLPENVK 16 1 0 Unmodified _GPVFAPPYEPLPENVK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.9634 2 877.461613 1752.90867 64705.86 0.68894 0.00060452 -0.026096 -2.2898E-05 0.66284 0.00058162 877.963108779172 881.468568445086 104.38 0.98627 104.38 103.96 104.95 0 689 78 12 0 0 0 0.00015175 3 65949 64.224 64.224 1 1.1149 1.3129 0 488100000 231320000 256780000 13949 1470 5316 5445 21772;21773;21774 21773 GPVFAPPYEPLPENVK 16 1 0 Unmodified _GPVFAPPYEPLPENVK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 877.9635 2 877.461613 1752.90867 64561.64 0.36531 0.00032054 0.036355 3.19E-05 0.40166 0.00035244 877.462145605694 881.468711643053 116.44 1.5113 116.44 116.09 117.6 0 376 64 13 0 0 0 2.9913E-06 2 68315 90.614 90.614 1 1.4752 1.3124 0 388250000 157000000 231260000 13950 1470 5316 5445 21775;21776 21776 GPVFAPPYEPLPENVK 16 1 0 Unmodified _GPVFAPPYEPLPENVK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 881.9707 2 877.461613 1752.90867 64520.69 0.54995 0.00048256 0.18865 0.00016553 0.7386 0.00064809 877.963465798236 881.468857639938 116.28 1.3245 116.28 115.94 117.26 0 417 61 13 0 0 0 4.2336E-12 2 67230 116.84 116.84 1 1.5052 1.3124 0 390490000 157220000 233270000 13951 1470 5316 5445 21777;21778 21777 GPVGLEGLLTTK 12 1 0 Unmodified _GPVGLEGLLTTK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.855 2 592.847896 1183.68124 79884.79 0.81413 0.00048265 -0.083023 -4.922E-05 0.73111 0.00043343 592.847728958781 596.854903206214 101.31 0.86609 101.31 100.87 101.73 -7.6294E-06 317 66 7 0 0 0 0.00023339 1 62054 85.533 77.313 1 2.0233 2.0712 0 28420000 8646800 19773000 13952 1611 5317 5446 21779 21779 GPVGLEGLLTTK 12 1 0 Unmodified _GPVGLEGLLTTK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.856 2 592.847896 1183.68124 80128.15 0.78786 0.00046708 0.053924 3.1968E-05 0.84179 0.00049905 592.847766080085 596.854902749909 100.46 0.91676 100.46 99.981 100.9 0 282 62 6 0 0 0 0.00077083 1 62914 66.056 59.751 1 2.1165 2.3891 0 65213000 25873000 39340000 13953 1611 5317 5446 21780 21780 GPVGLEGLLTTK 12 1 0 Unmodified _GPVGLEGLLTTK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.8549 2 592.847896 1183.68124 79339.06 1.0383 0.00061553 0.03512 2.0821E-05 1.0734 0.00063635 592.847791871141 596.854986429011 113.91 0.47824 113.91 113.66 114.14 0 111 21 7 0 0 0 0.0025251 1 66350 58.37 49.838 1 1.7495 1.3826 0 6098400 1890200 4208200 13954 1611 5317 5446 21781 21781 GPVGLEGLLTTK 12 1 0 Unmodified _GPVGLEGLLTTK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.848 2 592.847896 1183.68124 80548.16 0.6782 0.00040207 -0.13469 -7.9852E-05 0.54351 0.00032222 592.84765586678 596.854854429425 113.66 0.53026 113.66 113.42 113.95 0 122 25 6 0 0 0 0.0036902 2 65362 55.401 51.478 1 1.8236 1.4815 0 4465000 1699400 2765600 13955 1611 5317 5446 21782;21783 21783 GPVGTVSEAQLAR 13 0 1 Unmodified _GPVGTVSEAQLAR_ 0 0 0 Q9NZM1 Q9NZM1 Q9NZM1 MYOF Myoferlin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8488 2 642.848958 1283.68336 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.494 1 52.494 51.994 52.994 0 0 0 0 0.0030136 1 29189 65.5 44.63 1 13956 2088 5318 5447 21784 21784 GPVLEALVAR 10 0 1 Unmodified _GPVLEALVAR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.8102 2 512.811116 1023.60768 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.123 1 87.123 86.623 87.623 7.6294E-06 0 0 0 1.8355E-05 1 52594 94.114 62.825 1 13957 1411 5319 5448 21785 21785 GPVLEALVAR 10 0 1 Unmodified _GPVLEALVAR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.8108 2 512.811116 1023.60768 NaN NaN NaN -0.45119 -0.00023138 NaN NaN NaN NaN 85.982 0.21784 85.982 85.892 86.11 -7.6294E-06 0 0 0 7.4661E-05 1 53006 98.933 79.456 1 NaN NaN 0 7000500 7000500 0 13958 1411 5319 5448 21786 21786 GPVTIPYPLFQSHVEDLYVEGLPEGIPFR 29 0 1 Unmodified _GPVTIPYPLFQSHVEDLYVEGLPEGIPFR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1094.239 3 1090.56756 3268.68085 58493.05 -0.24667 -0.00026901 0.72755 0.00079345 0.48088 0.00052443 1091.23779733199 1094.23808243456 133.3 0.19862 133.3 133.19 133.39 0 26 5 9 0 0 0 3.0119E-07 1 87285 45.511 45.511 1 0.99569 1.0642 0 44883000 23684000 21199000 13959 789 5320 5449 21787 21787 GPVTIVSGK 9 1 0 Unmodified _GPVTIVSGK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.2657 2 429.258185 856.501818 91509.64 0.34245 0.000147 0.47813 0.00020524 0.82058 0.00035224 429.258447196611 433.265258887268 35.773 0.96714 35.773 35.314 36.281 0 247 83 5 0 0 0 0.0042156 2 18080 69.825 61.052 1 1.1959 1.2789 0 36913000 16383000 20530000 13960 1742 5321 5450 21788;21789 21788 GPVTIVSGK 9 1 0 Unmodified _GPVTIVSGK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 429.2578 2 429.258185 856.501818 91842.57 -0.51274 -0.0002201 0.41806 0.00017946 -0.094677 -4.0641E-05 429.258331860701 433.265404748367 41.013 0.61865 41.013 40.652 41.271 0 195 51 6 0 0 0 0.044207 1 18447 40.352 31.579 1 1.4839 1.2126 0 5590600 2308000 3282600 13961 1742 5321 5450 21790 21790 GPYESGSGHSSGLGHQESR 19 0 1 Unmodified _GPYESGSGHSSGLGHQESR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.9556 3 643.620903 1927.84088 NaN NaN NaN 0.44486 0.00028632 NaN NaN NaN NaN 16.086 0.23897 16.086 15.986 16.225 0 0 0 0 0.00039308 1 3539 52.045 45.475 1 NaN NaN 0 2110800 2110800 0 + 13962 1179 5322 5451 21791 21791 GPYESGSGHSSGLGHQESR 19 0 1 Unmodified _GPYESGSGHSSGLGHQESR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.2894 3 643.620903 1927.84088 NaN NaN NaN 0.010861 6.9906E-06 NaN NaN NaN NaN 15.607 0.45663 15.607 15.401 15.858 0 0 0 0 0.0021751 1 3120 41.348 35.08 1 NaN NaN 0 950390 950390 0 + 13963 1179 5322 5451 21792 21792 GPYESGSGHSSGLGHR 16 0 1 Unmodified _GPYESGSGHSSGLGHR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.9105 3 528.909837 1583.70768 NaN NaN NaN -0.27787 -0.00014697 NaN NaN NaN NaN 15.817 0.54377 15.817 15.681 16.225 0 0 0 0 0.00049748 1 3370 62.861 52.809 1 NaN NaN 0 9543500 9543500 0 + 13964 1179 5323 5452 21793 21793 GPYESGSGHSSGLGHR 16 0 1 Unmodified _GPYESGSGHSSGLGHR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.91 3 528.909837 1583.70768 NaN NaN NaN 0.065281 3.4528E-05 NaN NaN NaN NaN 15.263 0.49146 15.263 15.148 15.639 0 0 0 0 0.00084551 1 2945 58.671 53.517 1 NaN NaN 0 18032000 18032000 0 + 13965 1179 5323 5452 21794 21794 GPYESGSGHSSGLGHR 16 0 1 Unmodified _GPYESGSGHSSGLGHR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.8624 2 792.861117 1583.70768 NaN NaN NaN NaN NaN NaN NaN NaN NaN 15.31 1 15.31 14.81 15.81 -9.5367E-07 0 0 0 0.00087414 1 2955 64.121 54.434 1 + 13966 1179 5323 5452 21795 21795 GPYESGSGHSSGLGHR 16 0 1 Unmodified _GPYESGSGHSSGLGHR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.9099 3 528.909837 1583.70768 NaN NaN NaN 0.48499 0.00025652 NaN NaN NaN NaN 16.619 0.33999 16.619 16.527 16.867 0 0 0 0 0.013159 1 3312 36.022 33.155 1 NaN NaN 0 1582900 1582900 0 + 13967 1179 5323 5452 21796 21796 GPYESGSGHSSGLGHR 16 0 1 Unmodified _GPYESGSGHSSGLGHR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.2442 3 528.909837 1583.70768 NaN NaN NaN 0.2938 0.00015539 NaN NaN NaN NaN 16.644 0.22439 16.644 16.528 16.752 0 0 0 0 0.012341 1 3008 36.638 36.23 1 NaN NaN 0 1721800 1721800 0 + 13968 1179 5323 5452 21797 21797 GPYHFR 6 0 1 Unmodified _GPYHFR_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3;B4DNC8 Q53H34 Q53H34 RPL13A;RPL13a 60S ribosomal protein L13a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 388.6953 2 388.695555 775.376558 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.279 1 21.279 20.779 21.779 0 0 0 0 0.040268 1 7601 89.775 37.186 1 13969 1558 5324 5453 21798 21798 GPYHFR 6 0 1 Unmodified _GPYHFR_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3;B4DNC8 Q53H34 Q53H34 RPL13A;RPL13a 60S ribosomal protein L13a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 388.6957 2 388.695555 775.376558 95619.73 0.011543 4.4868E-06 0.2916 0.00011334 0.30315 0.00011783 388.69559883888 393.699631629133 22.836 0.93426 22.836 22.645 23.579 1.9073E-06 155 42 8 0 0 0 0.058349 1 7491 81.297 34.253 1 0.94767 0.80345 0 32338000 16536000 15802000 13970 1558 5324 5453 21799 21799 GPYHFR 6 0 1 Unmodified _GPYHFR_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3;B4DNC8 Q53H34 Q53H34 RPL13A;RPL13a 60S ribosomal protein L13a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 388.6957 2 388.695555 775.376558 94392.77 -0.18905 -7.3485E-05 0.49198 0.00019123 0.30292 0.00011774 388.695685958611 393.699732292032 22.666 0.711 22.666 22.438 23.149 0 115 29 7 0 0 0 0.058349 1 6911 81.297 34.253 1 0.80213 0.69584 0 23932000 12995000 10937000 13971 1558 5324 5453 21800 21800 GQAAVQQLQAEGLSPR 16 0 1 Unmodified _GQAAVQQLQAEGLSPR_ 0 0 0 E9PQ63;A8MTM1;P16152 E9PQ63 E9PQ63 CBR1 Carbonyl reductase [NADPH] 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.9407 2 826.939367 1651.86418 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.878 1 68.878 68.378 69.378 0 0 0 0 1.1038E-07 1 39954 103.88 89.19 1 13972 795 5325 5454 21801 21801 GQAAVQQLQAEGLSPR 16 0 1 Unmodified _GQAAVQQLQAEGLSPR_ 0 0 0 E9PQ63;A8MTM1;P16152 E9PQ63 E9PQ63 CBR1 Carbonyl reductase [NADPH] 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.9391 2 826.939367 1651.86418 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.779 1 67.779 67.279 68.279 0 0 0 0 6.1564E-08 1 40193 105.65 89.759 1 13973 795 5325 5454 21802 21802 GQAAVQQLQAEGLSPR 16 0 1 Unmodified _GQAAVQQLQAEGLSPR_ 0 0 0 E9PQ63;A8MTM1;P16152 E9PQ63 E9PQ63 CBR1 Carbonyl reductase [NADPH] 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.9457 2 826.939367 1651.86418 67760.41 0.65114 0.00053845 0.16104 0.00013317 0.81218 0.00067162 826.939030718231 831.943840958399 79.296 0.40741 79.296 79.1 79.507 0 89 23 5 0 0 0 0.012186 1 42657 32.567 32.567 1 1.6784 1.4877 0 1562100 563450 998660 13974 795 5325 5454 21803 21803 GQATDIAIQAEEIMK 15 1 0 Oxidation (M) _GQATDIAIQAEEIM(ox)K_ GQATDIAIQAEEIM(1)K GQATDIAIQAEEIM(50.35)K 0 1 0 M0R208;Q16740;M0QYV5 M0R208 M0R208 CLPP ATP-dependent Clp protease proteolytic subunit;ATP-dependent Clp protease proteolytic subunit, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.9169 2 817.40872 1632.80289 NaN NaN NaN 0.0026298 2.1496E-06 NaN NaN NaN NaN 77.002 0.34555 77.002 76.805 77.15 0 0 0 0 0.0033677 1 45372 50.354 43.501 1 NaN NaN 0 5726400 0 5726400 13975 1356 5326 5455 21804 21804 1024 GQCYLYMK 8 1 0 Oxidation (M) _GQCYLYM(ox)K_ GQCYLYM(1)K GQCYLYM(55.5)K 0 1 0 Q9BXY0;H0YBV6;A0PJ56 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.7454 2 539.738445 1077.46234 85218.63 0.51367 0.00027725 -0.45713 -0.00024673 0.056548 3.0521E-05 539.738064276675 543.74539375568 31.242 0.38539 31.242 31.12 31.506 -1.9073E-06 76 33 4 0 0 0 0.012107 1 15400 55.504 51.828 1 1.1435 1.1496 0 7053000 3092400 3960600 13976 2016 5327 5456 21805 21805 1853 GQDIEYIEIR 10 0 1 Unmodified _GQDIEYIEIR_ 0 0 0 Q92878;H7C0V2 Q92878 Q92878 RAD50 DNA repair protein RAD50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.3167 2 618.31696 1234.61937 77869.89 0.38969 0.00024095 0.7553 0.00046702 1.145 0.00070797 618.316823033879 623.321994024947 91.7 0.52629 91.7 91.47 91.997 0 116 33 5 0 0 0 0.0016591 1 50150 72.643 62.847 1 0.37551 0.3267 0 1539900 1155800 384160 13977 1953 5328 5457 21806 21806 GQDPGAPQLQSESK 14 1 0 Unmodified _GQDPGAPQLQSESK_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.3505 2 721.34952 1440.68449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.861 1 27.861 27.361 28.361 0 0 0 0 0.0024031 1 13114 63.473 39.181 1 13978 1820 5329 5458 21807 21807 GQDPGAPQLQSESKPPK 17 2 0 Unmodified _GQDPGAPQLQSESKPPK_ 0 0 1 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.9784 3 588.635602 1762.88498 79090.34 0.70259 0.00041357 -0.22971 -0.00013522 0.47288 0.00027835 588.635518295476 593.978321220922 27.997 0.48089 27.997 27.732 28.213 -1.9073E-06 204 32 8 0 0 0 3.6246E-05 2 12987 59.728 59.728 1 1.0758 1.27 0 57523000 27449000 30074000 13979 1820 5330 5459 21808;21809 21808 GQDPGAPQLQSESKPPK 17 2 0 Unmodified _GQDPGAPQLQSESKPPK_ 0 0 1 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 890.4641 2 882.449765 1762.88498 66882.53 0.59011 0.00052075 0.050198 4.4298E-05 0.64031 0.00056504 882.951522030804 890.965593809761 27.951 0.41185 27.951 27.732 28.144 1.9073E-06 78 27 6 0 0 0 0.00042451 3 13065 62.685 62.685 1 1.0409 1.2378 0 23834000 11978000 11856000 13980 1820 5330 5459 21810;21811;21812 21812 GQDPGAPQLQSESKPPK 17 2 0 Unmodified _GQDPGAPQLQSESKPPK_ 0 0 1 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 890.9662 2 882.449765 1762.88498 65826.88 0.29677 0.00026188 0.19958 0.00017612 0.49635 0.00043801 882.449700980535 890.464146378726 27.292 0.35321 27.292 27.087 27.441 0 78 18 6 0 0 0 3.8065E-08 1 12546 100.22 94.499 1 1.0684 1.2353 0 34889000 15584000 19305000 13981 1820 5330 5459 21813 21813 GQDPGAPQLQSESKPPK 17 2 0 Unmodified _GQDPGAPQLQSESKPPK_ 0 0 1 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.6362 3 588.635602 1762.88498 79032.85 0.45352 0.00026696 -0.19056 -0.00011217 0.26296 0.00015479 588.63556334867 593.978283700714 27.302 0.44537 27.302 27.059 27.505 0 148 22 10 0 0 0 2.127E-05 2 12575 78.501 78.501 1 1.089 1.2635 0 84775000 39027000 45748000 13982 1820 5330 5459 21814;21815 21815 GQDPGAPQLQSESKPPK 17 2 0 Unmodified _GQDPGAPQLQSESKPPK_ 0 0 1 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.9706 3 588.635602 1762.88498 78615.63 0.29941 0.00017624 0.07538 4.4371E-05 0.37479 0.00022061 588.635660785112 593.978497314312 32.498 0.99094 32.498 31.85 32.841 0 290 49 8 0 0 0 0.0084169 1 13759 26.474 26.474 1 1.9571 1.6732 0 11869000 4164100 7704500 13983 1820 5330 5459 21816 21816 GQDPGAPQLQSESKPPK 17 2 0 Unmodified _GQDPGAPQLQSESKPPK_ 0 0 1 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.9786 3 588.635602 1762.88498 78502.86 0.50513 0.00029734 -0.062652 -3.6879E-05 0.44247 0.00026046 588.635621013638 593.978352733442 32.716 0.96732 32.716 32.044 33.012 0 276 47 8 0 0 0 0.0021508 2 13428 33.308 33.308 1 2.0717 1.7509 0 11479000 3890100 7589100 13984 1820 5330 5459 21817;21818 21817 GQDPGAPQLQSESKPPKK 18 3 0 Unmodified _GQDPGAPQLQSESKPPKK_ 0 0 2 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.6683 3 631.333923 1890.97994 78622.46 0.54836 0.0003462 -0.18836 -0.00011892 0.36 0.00022728 631.668435683423 639.348306966742 21.238 0.38297 21.238 21.059 21.442 1.9073E-06 74 17 7 0 0 0 5.5408E-05 3 7522 55.864 55.864 1 1.1413 1.3737 0 12229000 5243300 6985300 13985 1820 5331 5460 21819;21820;21821 21819 GQDPGAPQLQSESKPPKK 18 3 0 Unmodified _GQDPGAPQLQSESKPPKK_ 0 0 2 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.6819 3 631.333923 1890.97994 76300.9 0.40845 0.00025787 0.29054 0.00018343 0.699 0.0004413 631.334086228985 639.348246856432 20.941 0.46229 20.941 20.63 21.092 0 85 18 6 0 0 0 1.2923E-05 2 7169 77.468 77.468 1 0.88052 1.0292 0 11801000 6657600 5143100 13986 1820 5331 5460 21822;21823 21823 GQDPGAPQLQSESKPPKK 18 3 0 Unmodified _GQDPGAPQLQSESKPPKK_ 0 0 2 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.3484 3 631.333923 1890.97994 75251.64 0.3991 0.00025197 -0.0061589 -3.8883E-06 0.39294 0.00024808 631.333456497224 639.348250084661 23.453 0.59822 23.453 23.1 23.699 0 162 29 8 0 0 0 0.0018781 2 7880 36.207 36.207 1 1.9449 1.8215 0 4079400 1529900 2549500 13987 1820 5331 5460 21824;21825 21825 GQDPGAPQLQSESKPPKK 18 3 0 Unmodified _GQDPGAPQLQSESKPPKK_ 0 0 2 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.3339 3 631.333923 1890.97994 75314.28 0.427 0.00026958 -0.045908 -2.8983E-05 0.38109 0.00024059 631.333702635464 639.348103869865 23.399 0.58835 23.399 23.059 23.647 0 145 27 7 0 0 0 0.0035669 2 7463 34.721 34.721 1 2.049 2.0265 0 3541600 1154400 2387200 13988 1820 5331 5460 21826;21827 21827 GQDSEQPQAQLQPEAQLHAPAQPQPQLQLQLQSHK 35 1 0 Unmodified _GQDSEQPQAQLQPEAQLHAPAQPQPQLQLQLQSHK_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.2487 4 974.996408 3895.95653 62841.91 0.20273 0.00019766 0.015179 1.48E-05 0.21791 0.00021246 975.49817342211 977.250950931934 87.471 0.33877 87.471 87.335 87.674 0 132 26 8 0 0 0 0.0045945 1 53860 23.891 23.891 1 1.1271 1.2033 0 23138000 11589000 11549000 13989 1260 5332 5461 21828 21828 GQDWIALVK 9 1 0 Unmodified _GQDWIALVK_ 0 0 0 A0A0A0MQS0;F8W9L8;E9PM57 A0A0A0MQS0 A0A0A0MQS0 PHF20L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 343.8625 3 343.862437 1028.56548 103390.6 0.40884 0.00014058 0.39539 0.00013596 0.80422 0.00027654 343.862564163934 346.533820337021 41.352 0.43946 41.352 41.171 41.61 0 164 36 7 0 0 0 0.037171 1 21729 21.686 10.092 1 0.52512 0.59188 0 127810000 81007000 46801000 13990 461 5333 5462 21829 21829 GQEADLEAGGEEVPEANGSAGK 22 1 0 Unmodified _GQEADLEAGGEEVPEANGSAGK_ 0 0 0 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1057.9761 2 1057.97727 2113.93999 58875.6 0.38352 0.00040576 -0.78263 -0.000828 -0.3991 -0.00042224 1058.47702754592 1062.48542949393 52.539 0.72981 52.539 52.208 52.938 3.8147E-06 249 52 8 0 0 0 6.9328E-38 3 29255 149.31 144.23 1 0.75591 0.80747 0 32190000 18952000 13237000 13991 2079 5334 5463 21830;21831;21832 21832 GQEADLEAGGEEVPEANGSAGK 22 1 0 Unmodified _GQEADLEAGGEEVPEANGSAGK_ 0 0 0 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1061.986 2 1057.97727 2113.93999 60259.99 0.32667 0.00034561 -0.52371 -0.00055407 -0.19703 -0.00020846 1058.47703441782 1062.48552376462 51.697 0.77644 51.697 51.201 51.977 0 266 61 8 0 0 0 1.2961E-15 2 29244 103.39 103.39 1 0.93487 1.007 0 37877000 17631000 20246000 13992 2079 5334 5463 21833;21834 21833 GQEEISGALPVASPASSR 18 0 1 Unmodified _GQEEISGALPVASPASSR_ 0 0 0 H0Y9D5;H0Y8S9;Q9UBK8 H0Y9D5 H0Y9D5 MTRR Methionine synthase reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.4509 2 878.447222 1754.87989 NaN NaN NaN 0.3511 0.00030842 NaN NaN NaN NaN 76.131 0.39351 76.131 75.964 76.357 0 0 0 0 1.9839E-09 1 44815 88.282 74.619 1 NaN NaN 0 4614100 0 4614100 13993 1287 5335 5464 21835 21835 GQEEISGALPVASPASSR 18 0 1 Unmodified _GQEEISGALPVASPASSR_ 0 0 0 H0Y9D5;H0Y8S9;Q9UBK8 H0Y9D5 H0Y9D5 MTRR Methionine synthase reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.4529 2 878.447222 1754.87989 NaN NaN NaN -0.066236 -5.8185E-05 NaN NaN NaN NaN 75.222 0.31384 75.222 75.017 75.331 0 0 0 0 0.00014114 2 45363 65.472 52.176 1 NaN NaN 0 6184500 0 6184500 13994 1287 5335 5464 21836;21837 21837 GQEVETSVTYYR 12 0 1 Unmodified _GQEVETSVTYYR_ 0 0 0 Q5HYD9;D6RFH4;H3BUX2;J3KNF8;O43169 Q5HYD9 Q5HYD9 DKFZp686M0619;CYB5B Cytochrome b5 type B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.3425 2 716.341163 1430.66777 72375.26 0.71969 0.00051554 0.19691 0.00014105 0.91659 0.00065659 716.341028433459 721.345437216778 50.7 0.70496 50.7 50.375 51.08 3.8147E-06 199 65 6 0 0 0 0.0010842 1 27915 73.781 72.454 1 1.802 1.8314 0 29408000 10601000 18807000 13995 1201 5336 5465 21838 21838 GQEVETSVTYYR 12 0 1 Unmodified _GQEVETSVTYYR_ 0 0 0 Q5HYD9;D6RFH4;H3BUX2;J3KNF8;O43169 Q5HYD9 Q5HYD9 DKFZp686M0619;CYB5B Cytochrome b5 type B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.3482 2 716.341163 1430.66777 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.409 1 50.409 49.909 50.909 0 0 0 0 1.389E-06 1 27824 97.813 78.498 1 13996 1201 5336 5465 21839 21839 GQEVETSVTYYR 12 0 1 Unmodified _GQEVETSVTYYR_ 0 0 0 Q5HYD9;D6RFH4;H3BUX2;J3KNF8;O43169 Q5HYD9 Q5HYD9 DKFZp686M0619;CYB5B Cytochrome b5 type B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.3469 2 716.341163 1430.66777 71463.88 0.60712 0.00043491 0.16401 0.00011749 0.77113 0.00055239 716.842787799881 721.345446726554 49.6 0.55258 49.6 49.299 49.852 0 158 45 5 0 0 0 1.4704E-05 2 27771 117.02 112.69 1 1.8718 2.0493 0 32648000 11973000 20675000 13997 1201 5336 5465 21840;21841 21840 GQFCGPCLR 9 0 1 Unmodified _GQFCGPCLR_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5;B4DM13;Q9BWT1 A8K8X5 A8K8X5 CDCA7L;CDCA7 Cell division cycle-associated 7-like protein;Cell division cycle-associated protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.7476 2 547.747136 1093.47972 84547.13 0.61981 0.0003395 0.87349 0.00047845 1.4933 0.00081795 547.747697851932 552.751704315436 46.388 0.5504 46.388 46.218 46.768 0 104 43 4 0 0 0 0.012656 1 25566 57.281 54.881 1 0.27215 0.28653 0 23199000 16975000 6224300 13998 295 5337 5466 21842 21842 GQFCGPCLR 9 0 1 Unmodified _GQFCGPCLR_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5;B4DM13;Q9BWT1 A8K8X5 A8K8X5 CDCA7L;CDCA7 Cell division cycle-associated 7-like protein;Cell division cycle-associated protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.7471 2 547.747136 1093.47972 82275.53 0.54337 0.00029763 -0.013171 -7.2144E-06 0.5302 0.00029041 547.746792144944 552.751544271808 54.529 0.54505 54.529 54.261 54.806 -3.8147E-06 144 37 5 0 0 0 0.05441 1 27140 36.701 36.701 1 0.98195 0.85253 0 2349100 1031800 1317300 13999 295 5337 5466 21843 21843 GQFCGPCLR 9 0 1 Unmodified _GQFCGPCLR_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5;B4DM13;Q9BWT1 A8K8X5 A8K8X5 CDCA7L;CDCA7 Cell division cycle-associated 7-like protein;Cell division cycle-associated protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.7473 2 547.747136 1093.47972 82759.26 0.41978 0.00022993 0.16896 9.2548E-05 0.58874 0.00032248 547.74702765062 552.751442969523 54.911 0.53467 54.911 54.614 55.148 0 160 41 5 0 0 0 0.048105 1 26729 38.792 38.792 1 1.0025 0.9014 0 2011400 1036300 975140 14000 295 5337 5466 21844 21844 GQFNFDHPDAFDNELILK 18 1 0 Unmodified _GQFNFDHPDAFDNELILK_ 0 0 0 A0A024R912;Q9BZX2;B4DGD3 A0A024R912 A0A024R912 UCK2 Uridine kinase;Uridine-cytidine kinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3475 3 707.340966 2119.00107 72731.33 0.56343 0.00039853 0.31956 0.00022604 0.88299 0.00062457 707.675406253545 710.012233142795 109.78 0.66945 109.78 109.43 110.1 0 215 50 7 0 0 0 2.0214E-05 1 68768 53.278 51.586 1 2.1587 2.1979 0 14161000 3972700 10188000 14001 268 5338 5467 21845 21845 GQFNFDHPDAFDNELILK 18 1 0 Unmodified _GQFNFDHPDAFDNELILK_ 0 0 0 A0A024R912;Q9BZX2;B4DGD3 A0A024R912 A0A024R912 UCK2 Uridine kinase;Uridine-cytidine kinase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.3409 3 707.340966 2119.00107 72257.7 0.73021 0.00051651 0.055772 3.9449E-05 0.78598 0.00055596 707.341100955768 710.346879924282 120.07 0.35172 120.07 119.9 120.25 -7.6294E-06 71 14 8 0 0 0 0.040517 2 71238 15.592 13.427 1 2.0382 1.5905 0 3782000 1379000 2403000 14002 268 5338 5467 21846;21847 21847 GQFNFDHPDAFDNELILK 18 1 0 Unmodified _GQFNFDHPDAFDNELILK_ 0 0 0 A0A024R912;Q9BZX2;B4DGD3 A0A024R912 A0A024R912 UCK2 Uridine kinase;Uridine-cytidine kinase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.0113 3 707.340966 2119.00107 72846.46 0.7443 0.00052648 -0.056384 -3.9883E-05 0.68792 0.00048659 707.674979991439 710.346527864718 119.85 0.45866 119.85 119.64 120.1 0 64 18 6 0 0 0 0.032387 1 70129 17.577 17.577 1 1.7625 1.3992 0 4015200 1775300 2239900 14003 268 5338 5467 21848 21848 GQGASRPHAPGTPAGR 16 0 2 Unmodified _GQGASRPHAPGTPAGR_ 0 0 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2618 3 506.262433 1515.76547 86222.64 -0.040782 -2.0646E-05 -0.10284 -5.2065E-05 -0.14362 -7.2711E-05 506.596895386561 512.935041245192 15.19 0.19161 15.19 15.084 15.276 9.5367E-07 14 4 5 0 0 0 0.00015893 1 2976 53.169 53.169 1 0.80752 0.89837 0 9109200 5170100 3939200 14004 1933 5339 5468 21849 21849 GQGASRPHAPGTPAGR 16 0 2 Unmodified _GQGASRPHAPGTPAGR_ 0 0 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.6352 3 506.262433 1515.76547 84683.06 -0.091861 -4.6506E-05 -1.5596 -0.00078958 -1.6515 -0.00083608 506.260177814843 513.269406008253 15.143 0.43597 15.143 15.057 15.493 0 25 14 4 0 0 0 0.00012347 1 2794 56.746 48.495 1 0.54658 0.58796 0 16292000 8790900 7500600 14005 1933 5339 5468 21850 21850 GQGASRPHAPGTPAGR 16 0 2 Unmodified _GQGASRPHAPGTPAGR_ 0 0 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.2623 3 506.262433 1515.76547 84582.44 -0.035632 -1.8039E-05 0.22837 0.00011562 0.19274 9.7578E-05 506.262496296515 512.934735743977 16.026 0.35778 16.026 15.833 16.191 0 197 36 8 0 0 0 0.00073083 2 2740 44.567 41.143 1 1.303 1.1778 0 3039700 1290300 1749400 14006 1933 5339 5468 21851;21852 21852 GQHEPSKPPPAGETVTGGFGAK 22 2 0 Unmodified _GQHEPSKPPPAGETVTGGFGAK_ 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.2798 4 538.022272 2148.05998 84233.57 0.72732 0.00039132 1.1448 0.00061593 1.8721 0.0010072 538.273190441544 542.030265392808 35.485 0.69826 35.485 35.231 35.929 0 297 65 9 0 0 0 1.8416E-05 2 17847 38.26 38.26 1 0.81069 0.95708 0 52571000 24556000 28015000 14007 2037 5340 5469 21853;21854 21854 GQHEPSKPPPAGETVTGGFGAK 22 2 0 Unmodified _GQHEPSKPPPAGETVTGGFGAK_ 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.7047 3 717.02727 2148.05998 71810.8 0.60934 0.00043691 0.22509 0.0001614 0.83443 0.00059831 717.361614420244 722.370409712159 33.68 0.50695 33.68 33.43 33.937 0 284 40 9 0 0 0 1.4583E-09 2 16878 85.013 85.013 1 0.78038 0.90599 0 99054000 50916000 48138000 14008 2037 5340 5469 21855;21856 21856 GQHEPSKPPPAGETVTGGFGAK 22 2 0 Unmodified _GQHEPSKPPPAGETVTGGFGAK_ 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.2807 4 538.022272 2148.05998 81309.63 0.54127 0.00029122 -0.1742 -9.3721E-05 0.36707 0.00019749 538.272753973002 542.280248940255 33.705 0.58517 33.705 33.407 33.992 0 314 47 10 0 0 0 0.00074237 3 16891 30.585 30.585 1 0.67363 0.78135 0 78912000 46334000 32578000 14009 2037 5340 5469 21857;21858;21859 21857 GQHEPSKPPPAGETVTGGFGAK 22 2 0 Unmodified _GQHEPSKPPPAGETVTGGFGAK_ 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.371 3 717.02727 2148.05998 71363.1 0.51627 0.00037018 0.044183 3.168E-05 0.56045 0.00040186 717.361551949939 722.370040348627 40.501 0.77414 40.501 40.215 40.99 3.8147E-06 340 62 8 0 0 0 0.045907 1 18591 15.363 15.363 1 0.46721 0.40023 0 8770400 6011000 2759400 14010 2037 5340 5469 21860 21860 GQHEPSKPPPAGETVTGGFGAK 22 2 0 Unmodified _GQHEPSKPPPAGETVTGGFGAK_ 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.027 3 717.02727 2148.05998 72144.41 0.42394 0.00030397 -0.24124 -0.00017297 0.1827 0.000131 717.026984824778 722.704377725564 40.324 0.94744 40.324 39.973 40.921 0 398 79 8 0 0 0 0.030443 1 18078 18.545 18.545 1 0.47979 0.40609 0 6776800 4585200 2191600 14011 2037 5340 5469 21861 21861 GQILMPNIGYGSNK 14 1 0 Oxidation (M) _GQILM(ox)PNIGYGSNK_ GQILM(1)PNIGYGSNK GQILM(98.16)PNIGYGSNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.3828 2 754.382308 1506.75006 69730.26 0.65249 0.00049223 -0.1123 -8.4714E-05 0.54019 0.00040751 754.382504238198 758.389577168341 70.864 0.96184 70.864 70.206 71.168 0 475 77 9 0 0 0 8.1121E-06 2 40967 98.156 88.968 1 1.2343 1.3933 0 79715000 35970000 43745000 14012 112 5341 5470 21862;21863 21863 97 GQILMPNIGYGSNK 14 1 0 Oxidation (M) _GQILM(ox)PNIGYGSNK_ GQILM(1)PNIGYGSNK GQILM(120.96)PNIGYGSNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.3841 2 754.382308 1506.75006 68773.16 0.52988 0.00039973 -0.15736 -0.00011871 0.37253 0.00028103 754.382211251307 758.389613385874 71.36 0.82401 71.36 71.004 71.828 0 406 71 8 0 0 0 5.7878E-10 2 41505 120.96 104.33 1 1.3327 1.5042 0 109610000 45680000 63927000 14013 112 5341 5470 21864;21865 21865 97 GQILMPNIGYGSNK 14 1 0 Oxidation (M) _GQILM(ox)PNIGYGSNK_ GQILM(1)PNIGYGSNK GQILM(99.22)PNIGYGSNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.39 2 754.382308 1506.75006 68859.31 0.51573 0.00038906 -0.11228 -8.4701E-05 0.40345 0.00030436 754.382451786464 758.389526939319 69.657 0.92125 69.657 69.042 69.964 0 443 76 8 0 0 0 4.7473E-06 1 41257 99.215 99.215 1 1.2238 1.3698 0 109690000 48275000 61411000 14014 112 5341 5470 21866 21866 97 GQILMPNIGYGSNK 14 1 0 Oxidation (M) _GQILM(ox)PNIGYGSNK_ GQILM(1)PNIGYGSNK GQILM(127.87)PNIGYGSNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.3906 2 754.382308 1506.75006 68316.87 0.47786 0.00036049 -0.28563 -0.00021547 0.19223 0.00014501 754.382216523117 758.38950531909 70.17 0.8285 70.17 69.886 70.714 0 410 67 9 0 0 0 1.5163E-14 2 41806 127.87 110.84 1 1.2865 1.4792 0 174040000 71729000 102310000 14015 112 5341 5470 21867;21868 21868 97 GQILMPNIGYGSNK 14 1 0 Oxidation (M) _GQILM(ox)PNIGYGSNK_ GQILM(1)PNIGYGSNK GQILM(53.25)PNIGYGSNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 754.3829 2 754.382308 1506.75006 68224.23 0.57237 0.00043179 -0.75752 -0.00057146 -0.18515 -0.00013967 754.382061496112 758.389531961552 80.887 0.61742 80.887 80.583 81.2 -7.6294E-06 197 39 6 0 0 0 0.00072635 1 43669 53.252 44.063 1 0.48484 0.37983 0 11581000 7329800 4250900 14016 112 5341 5470 21869 21869 97 GQILMPNIGYGSNK 14 1 0 Oxidation (M) _GQILM(ox)PNIGYGSNK_ GQILM(1)PNIGYGSNK GQILM(80.24)PNIGYGSNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 754.3829 2 754.382308 1506.75006 69226.02 0.64435 0.00048609 -0.20757 -0.00015659 0.43678 0.0003295 754.382049343481 758.389390942368 81.438 0.6984 81.438 81.156 81.855 0 235 41 8 0 0 0 6.2736E-05 2 44186 80.245 63.219 1 0.5031 0.39572 0 11115000 7710400 3404300 14017 112 5341 5470 21870;21871 21870 97 GQILMPNIGYGSNK 14 1 0 Oxidation (M) _GQILM(ox)PNIGYGSNK_ GQILM(1)PNIGYGSNK GQILM(82.36)PNIGYGSNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.8833 2 754.382308 1506.75006 68141.21 0.63604 0.00047982 -0.46996 -0.00035453 0.16609 0.00012529 754.382207667988 758.389460143582 81.137 0.57924 81.137 80.857 81.436 0 217 36 7 0 0 0 5.6684E-05 2 43014 82.362 65.73 1 0.4888 0.4026 0 10584000 6997800 3586300 14018 112 5341 5470 21872;21873 21873 97 GQILMPNIGYGSNK 14 1 0 Oxidation (M) _GQILM(ox)PNIGYGSNK_ GQILM(1)PNIGYGSNK GQILM(78.9)PNIGYGSNK 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.3832 2 754.382308 1506.75006 68141.25 0.53554 0.000404 0.087602 6.6085E-05 0.62314 0.00047009 754.382652307883 758.389486749631 81.713 0.72893 81.713 81.366 82.095 0 210 39 9 0 0 0 6.6572E-05 2 43474 78.903 62.271 1 0.48883 0.39988 0 8376700 5846800 2529900 14019 112 5341 5470 21874;21875 21875 97 GQILMPNIGYGSNK 14 1 0 Unmodified _GQILMPNIGYGSNK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.3914 2 746.384851 1490.75515 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.525 1 88.525 88.025 89.025 7.6294E-06 0 0 0 0.010708 1 54599 51.013 16.126 1 14020 112 5341 5471 21876 21876 GQILMPNIGYGSNK 14 1 0 Unmodified _GQILMPNIGYGSNK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.3839 2 746.384851 1490.75515 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.535 1 88.535 88.035 89.035 0 0 0 0 0.007364 1 54605 62.258 25.147 1 14021 112 5341 5471 21877 21877 GQILMPNIGYGSNK 14 1 0 Unmodified _GQILMPNIGYGSNK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.3929 2 746.384851 1490.75515 72316.3 0.71192 0.00053137 0.096575 7.2082E-05 0.8085 0.00060345 746.384733069566 750.391924157209 102.49 0.37966 102.49 102.26 102.64 0 121 27 6 0 0 0 0.023552 2 58069 32.946 17.526 1 1.0747 0.84676 0 5640900 2986100 2654800 14022 112 5341 5471 21878;21879 21878 GQILMPNIGYGSNK 14 1 0 Unmodified _GQILMPNIGYGSNK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 750.3935 2 746.384851 1490.75515 70180.88 0.43388 0.00032384 0.57872 0.00043194 1.0126 0.00075578 746.384697574159 750.392148720583 102.33 0.44524 102.33 102.04 102.49 0 127 33 6 0 0 0 0.00024168 2 57111 63.408 28.184 1 1.0414 0.84971 0 6148200 3045300 3102900 14023 112 5341 5471 21880;21881 21881 GQILMPNIGYGSNKK 15 2 0 Oxidation (M) _GQILM(ox)PNIGYGSNKK_ GQILM(1)PNIGYGSNKK GQILM(63.68)PNIGYGSNKK 0 1 1 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2896 3 545.955619 1634.84503 81440.23 0.61414 0.0003353 -0.50558 -0.00027603 0.10856 5.9269E-05 546.290013784977 551.297699773715 53.705 0.82957 53.705 53.432 54.261 0 267 64 8 0 0 0 7.534E-05 2 30019 63.682 63.682 1 1.2021 1.419 0 60023000 25801000 34222000 14024 112 5342 5472 21882;21883 21883 97 GQILMPNIGYGSNKK 15 2 0 Oxidation (M) _GQILM(ox)PNIGYGSNKK_ GQILM(1)PNIGYGSNKK GQILM(62.41)PNIGYGSNKK 0 1 1 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.4473 2 818.42979 1634.84503 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.707 1 53.707 53.207 54.207 0 0 0 0 0.00070593 1 30091 62.408 30.565 1 14025 112 5342 5472 21884 21884 97 GQILMPNIGYGSNKK 15 2 0 Oxidation (M) _GQILM(ox)PNIGYGSNKK_ GQILM(1)PNIGYGSNKK GQILM(48.9)PNIGYGSNKK 0 1 1 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.2913 3 545.955619 1634.84503 81274.09 0.53283 0.0002909 0.62422 0.0003408 1.1571 0.0006317 546.291196028279 551.298535546404 52.016 0.65207 52.016 51.61 52.262 0 267 51 8 0 0 0 0.00035506 1 29510 48.899 48.899 1 1.065 1.2342 0 63456000 31021000 32434000 14026 112 5342 5472 21885 21885 97 GQILMPNIGYGSNKK 15 2 0 Oxidation (M) _GQILM(ox)PNIGYGSNKK_ GQILM(1)PNIGYGSNKK GQILM(53.83)PNIGYGSNKK 0 1 1 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.2991 3 545.955619 1634.84503 80959.67 0.709 0.00038708 -0.50029 -0.00027313 0.20872 0.00011395 545.955381451745 551.632676278873 52.45 0.86352 52.45 52.221 53.084 0 294 68 7 0 0 0 0.00020863 1 29796 53.828 53.828 1 1.1053 1.2814 0 69276000 32376000 36900000 14027 112 5342 5472 21886 21886 97 GQILMPNIGYGSNKK 15 2 0 Oxidation (M) _GQILM(ox)PNIGYGSNKK_ GQILM(1)PNIGYGSNKK GQILM(47.55)PNIGYGSNKK 0 1 1 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.9557 3 545.955619 1634.84503 82096.05 0.31898 0.00017415 -0.45943 -0.00025083 -0.14045 -7.6678E-05 546.289913880458 551.297868754778 63.134 0.5931 63.134 62.84 63.433 0 208 51 7 0 0 0 0.00051817 2 31797 47.545 47.545 1 0.54416 0.46166 0 6179800 3612000 2567800 14028 112 5342 5472 21887;21888 21888 97 GQILMPNIGYGSNKK 15 2 0 Unmodified _GQILMPNIGYGSNKK_ 0 0 1 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.6257 3 540.62398 1618.85011 83040.66 0.50172 0.00027124 0.24592 0.00013295 0.74764 0.00040419 540.624247056245 545.966851975747 83.253 0.40848 83.253 83.03 83.439 0 101 22 6 0 0 0 0.016526 2 45358 23.481 23.481 1 1.1314 0.98459 0 3290800 1674400 1616400 14029 112 5342 5473 21889;21890 21890 GQILMPNIGYGSNKK 15 2 0 Unmodified _GQILMPNIGYGSNKK_ 0 0 1 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.9591 3 540.62398 1618.85011 83644.66 0.59747 0.00032301 -0.28295 -0.00015297 0.31452 0.00017004 540.62393845263 545.966623861861 83.278 0.43164 83.278 83 83.432 0 113 23 7 0 0 0 0.00027371 3 44531 38.028 38.028 1 1.0608 0.91924 0 2724200 1328500 1395600 14030 112 5342 5473 21891;21892;21893 21891 GQIQVILGPMFSGK 14 1 0 Oxidation (M) _GQIQVILGPM(ox)FSGK_ GQIQVILGPM(1)FSGK GQIQVILGPM(90.65)FSGK 0 1 0 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3;K7ES52;K7ERJ1;K7ENW5 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.916 2 745.905419 1489.79629 NaN NaN NaN 0.50493 0.00037663 NaN NaN NaN NaN 99.133 0.6125 99.133 98.724 99.337 0 0 0 0 2.0351E-05 1 61836 90.653 68.967 1 NaN NaN 0 10183000 0 10183000 14031 252 5343 5474 21894 21894 189 GQLCELSCSTDYR 13 0 1 Unmodified _GQLCELSCSTDYR_ 0 0 0 E9PKG1;Q5U8W9;H7C2I1;Q99873;A0A087X1W2 E9PKG1 E9PKG1 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.8466 2 794.840147 1587.66574 NaN NaN NaN -0.96356 -0.00076587 NaN NaN NaN NaN 55.327 0.22531 55.327 55.175 55.4 0 0 0 0 0.0025346 1 31077 69.01 54.038 1 NaN NaN 0 6635300 0 6635300 14032 1243 5344 5475 21895 21895 GQLEALQVDGGR 12 0 1 Unmodified _GQLEALQVDGGR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.3318 2 621.825483 1241.63641 NaN NaN NaN 0.051386 3.1953E-05 NaN NaN NaN NaN 57.34 0.72659 57.34 57.043 57.77 3.8147E-06 0 0 0 0.00083731 2 32189 84.658 54.915 1 NaN NaN 0 54054000 0 54054000 + 14033 1171;1158 5345 5476 21896;21897 21897 GQLEALQVDGGR 12 0 1 Unmodified _GQLEALQVDGGR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8262 2 621.825483 1241.63641 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.217 1 57.217 56.717 57.717 0 0 0 0 4.6247E-16 1 32279 121.41 71.968 1 + 14034 1171;1158 5345 5476 21898 21898 GQLEALQVDGGR 12 0 1 Unmodified _GQLEALQVDGGR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.8251 2 621.825483 1241.63641 76262.58 0.6488 0.00040344 0.017351 1.0789E-05 0.66615 0.00041423 621.825308770244 626.829504005228 66.357 1.7151 66.357 65.851 67.566 0 304 113 8 0 0 0 0.00019881 2 34339 78.513 61.881 1 0.88415 0.72382 0 16402000 8476800 7925700 + 14035 1171;1158 5345 5476 21899;21900 21900 GQLEALQVDGGR 12 0 1 Unmodified _GQLEALQVDGGR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.8295 2 621.825483 1241.63641 76252.28 0.43169 0.00026843 0.063537 3.9509E-05 0.49522 0.00030794 621.825416553383 626.829625721028 66.823 1.517 66.823 66.389 67.906 -7.6294E-06 306 95 8 0 0 0 0.00021735 2 33859 82.278 57.758 1 0.97238 0.79128 0 12455000 6204100 6251000 + 14036 1171;1158 5345 5476 21901;21902 21901 GQLEANLLQVLEK 13 1 0 Unmodified _GQLEANLLQVLEK_ 0 0 0 CON__Q6KB66-1;Q6KB66;CON__Q0VBK2 CON__Q6KB66-1 CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.9147 2 727.914298 1453.81404 NaN NaN NaN -0.44875 -0.00032665 NaN NaN NaN NaN 131.32 0.38852 131.32 131.11 131.5 0 0 0 0 0.0031445 1 78824 66.267 39.752 1 NaN NaN 0 1217500 1217500 0 + 14037 1177 5346 5477 21903 21903 GQLEQITGK 9 1 0 Unmodified _GQLEQITGK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.2766 2 487.269281 972.52401 85717.36 0.063145 3.0769E-05 0.36026 0.00017554 0.42341 0.00020631 487.269335512769 491.27625063443 34.229 1.0201 34.229 33.701 34.721 3.8147E-06 513 90 8 0 0 0 0.0049289 2 17378 68.016 39.098 1 0.85467 0.96581 0 142320000 83160000 59163000 14038 1817 5347 5478 21904;21905 21905 GQLEQITGK 9 1 0 Unmodified _GQLEQITGK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.2693 2 487.269281 972.52401 85848.1 0.25872 0.00012607 0.031464 1.5332E-05 0.29018 0.0001414 487.269234663675 491.276294234002 33.665 0.93054 33.665 33.172 34.102 0 386 76 7 0 0 0 0.00027741 3 16776 103.74 68.808 1 0.81477 0.94206 0 200210000 109930000 90279000 14039 1817 5347 5478 21906;21907;21908 21907 GQLEQITGK 9 1 0 Unmodified _GQLEQITGK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.2699 2 487.269281 972.52401 85452.06 0.033846 1.6492E-05 0.18967 9.2422E-05 0.22352 0.00010891 487.269375370013 491.276338107978 39.094 1.115 39.094 38.531 39.646 0 456 87 8 0 0 0 0.0018198 2 17784 80.438 56.283 1 0.92145 0.75798 0 39404000 19490000 19913000 14040 1817 5347 5478 21909;21910 21910 GQLEQITGK 9 1 0 Unmodified _GQLEQITGK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.2764 2 487.269281 972.52401 86516.56 0.033649 1.6396E-05 0.263 0.00012815 0.29665 0.00014455 487.269353307167 491.276362128584 39.178 1.2952 39.178 38.665 39.96 0 444 100 9 0 0 0 0.008633 2 17235 60.91 43.688 1 0.9544 0.78714 0 30146000 15583000 14563000 14041 1817 5347 5478 21911;21912 21911 GQLESIVENIR 11 0 1 Unmodified _GQLESIVENIR_ 0 0 0 P17858;Q7L2M7;Q9BSP4;B3KNQ7;Q59GI2;Q7Z3R9;Q6MZK4 P17858 P17858 PFKL;DKFZp686G1648;DKFZp686L2097 ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.3493 2 629.343509 1256.67246 79282.38 0.78621 0.0004948 0.093996 5.9156E-05 0.8802 0.00055395 629.342668918748 634.348148669082 91.505 0.38617 91.505 91.382 91.768 7.6294E-06 133 29 9 0 0 0 0.00016552 1 55387 94.297 75.625 1 1.1532 1.2454 0 48541000 18621000 29920000 14042 1495 5348 5479 21913 21913 GQLESIVENIR 11 0 1 Unmodified _GQLESIVENIR_ 0 0 0 P17858;Q7L2M7;Q9BSP4;B3KNQ7;Q59GI2;Q7Z3R9;Q6MZK4 P17858 P17858 PFKL;DKFZp686G1648;DKFZp686L2097 ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.3431 2 629.343509 1256.67246 76562.5 0.59268 0.000373 -0.22819 -0.00014361 0.36448 0.00022939 629.343122839989 634.34732786275 105.29 0.42729 105.29 105 105.43 0 100 26 6 0 0 0 0.0083203 1 60026 60.518 52.631 1 0.67087 0.57139 0 5478000 3285300 2192800 14043 1495 5348 5479 21914 21914 GQLESIVENIR 11 0 1 Unmodified _GQLESIVENIR_ 0 0 0 P17858;Q7L2M7;Q9BSP4;B3KNQ7;Q59GI2;Q7Z3R9;Q6MZK4 P17858 P17858 PFKL;DKFZp686G1648;DKFZp686L2097 ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 629.3439 2 629.343509 1256.67246 76630.99 0.57412 0.00036132 -0.40372 -0.00025408 0.1704 0.00010724 629.343169418719 634.346982849999 105.12 0.41394 105.12 104.83 105.24 0 95 26 6 0 0 0 0.025456 1 59023 42.718 36.424 1 0.62775 0.52082 0 5277700 3180600 2097000 14044 1495 5348 5479 21915 21915 GQLNADEISLRPAQSFLMNK 20 1 1 Oxidation (M) _GQLNADEISLRPAQSFLM(ox)NK_ GQLNADEISLRPAQSFLM(1)NK GQLNADEISLRPAQSFLM(40.35)NK 0 1 1 D3DQV9;Q59G42;B4DZF2;P78344;Q2TU89 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.0592 3 750.051198 2247.13177 NaN NaN NaN 0.13095 9.8222E-05 NaN NaN NaN NaN 98.464 0.51085 98.464 98.15 98.661 0 0 0 0 0.0029196 1 60233 40.349 25.889 1 NaN NaN 0 10746000 0 10746000 14045 1054 5349 5480 21916 21916 824 GQLNADEISLRPAQSFLMNK 20 1 1 Oxidation (M) _GQLNADEISLRPAQSFLM(ox)NK_ GQLNADEISLRPAQSFLM(1)NK GQLNADEISLRPAQSFLM(58.69)NK 0 1 1 D3DQV9;Q59G42;B4DZF2;P78344;Q2TU89 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.0594 3 750.051198 2247.13177 NaN NaN NaN 0.55802 0.00041855 NaN NaN NaN NaN 97.473 0.5152 97.473 97.275 97.79 0 0 0 0 2.9833E-05 1 60917 58.693 53.165 1 NaN NaN 0 14478000 0 14478000 14046 1054 5349 5480 21917 21917 824 GQLSWHQK 8 1 0 Unmodified _GQLSWHQK_ 0 0 0 Q9H836;G5E975;Q12824;B5MCL5 Q9H836 Q9H836 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.2567 2 492.256508 982.498464 87874.2 0.21523 0.00010595 -0.056563 -2.7844E-05 0.15866 7.8103E-05 492.256378066347 496.263453058578 22.484 0.62413 22.484 22.263 22.887 0 126 38 6 0 0 0 0.011877 1 8594 68.915 40.403 1 0.81606 0.83028 0 14009000 7988900 6020200 14047 1276 5350 5481 21918 21918 GQLSWHQK 8 1 0 Unmodified _GQLSWHQK_ 0 0 0 Q9H836;G5E975;Q12824;B5MCL5 Q9H836 Q9H836 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2566 2 492.256508 982.498464 88416.35 0.23878 0.00011754 -0.4693 -0.00023102 -0.23052 -0.00011347 492.25578773054 496.263639039639 22.1 0.49863 22.1 21.89 22.388 1.9073E-06 66 22 5 0 0 0 0.0083247 2 8142 79.116 50.604 1 0.82384 0.84589 0 17798000 9329000 8468700 14048 1276 5350 5481 21919;21920 21920 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.8502 2 676.84949 1351.68443 73067.69 0.56148 0.00038004 -0.023083 -1.5623E-05 0.53839 0.00036441 676.849510053411 680.856575090995 23.839 0.48282 23.839 23.622 24.104 -1.9073E-06 155 23 10 0 0 0 1.3705E-73 2 9581 217.66 217.66 1 1.7392 2.0574 0 418580000 155460000 263120000 14049 1569 5351 5482 21921;21922 21922 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.5686 3 451.568752 1351.68443 88414.22 0.10747 4.8532E-05 -0.35156 -0.00015875 -0.24408 -0.00011022 451.568862910553 454.2394995792 23.833 0.60799 23.833 23.556 24.164 0 157 29 8 0 0 0 5.477E-06 2 9624 80.871 80.871 1 1.768 2.0659 0 278720000 101360000 177360000 14050 1569 5351 5482 21923;21924 21924 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 676.8495 2 676.84949 1351.68443 73132.62 0.50542 0.00034209 0.028696 1.9423E-05 0.53411 0.00036151 676.849609987866 680.856613577859 23.503 0.78786 23.503 23.246 24.034 0 161 32 11 0 0 0 3.8696E-210 2 9316 303.08 303.08 1 1.7077 2.004 0 337710000 125050000 212670000 14051 1569 5351 5482 21925;21926 21926 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.2401 3 451.568752 1351.68443 88860.01 0.058896 2.6596E-05 -0.11596 -5.2362E-05 -0.057059 -2.5766E-05 451.568951744644 454.240019531285 23.503 0.58194 23.503 23.291 23.873 0 137 24 10 0 0 0 7.3041E-07 2 9305 92.707 92.707 1 1.7761 2.0807 0 314940000 112150000 202790000 14052 1569 5351 5482 21927;21928 21927 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.8575 2 676.84949 1351.68443 73184.7 0.37196 0.00025176 -0.075302 -5.0968E-05 0.29666 0.0002008 676.849705060859 680.856576510166 25.982 1.2921 25.982 25.761 27.054 0 207 58 11 0 0 0 6.6917E-88 2 9598 228.98 228.98 1 3.4614 2.9885 0 105420000 23743000 81680000 14053 1569 5351 5482 21929;21930 21929 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 454.24 3 451.568752 1351.68443 88668.75 -0.048108 -2.1724E-05 -0.053809 -2.4298E-05 -0.10192 -4.6023E-05 451.568956258989 454.24011474791 25.984 1.0637 25.984 25.555 26.618 0 181 44 10 0 0 0 6.3422E-05 1 9615 69.815 69.815 1 3.148 2.6589 0 57209000 14457000 42752000 14054 1569 5351 5482 21931 21931 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 676.8496 2 676.84949 1351.68443 73625.92 0.5467 0.00037003 -0.071816 -4.8608E-05 0.47488 0.00032142 676.849730026061 680.856561717344 26.015 1.0591 26.015 25.744 26.803 -1.9073E-06 206 47 11 0 0 0 7.3557E-38 2 9106 182.71 172.19 1 3.4607 2.9511 0 93949000 22419000 71530000 14055 1569 5351 5482 21932;21933 21933 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 454.2399 3 451.568752 1351.68443 88786.93 -0.013241 -5.9794E-06 -0.01337 -6.0373E-06 -0.026611 -1.2017E-05 451.56894622977 454.240134365223 26.006 0.89823 26.006 25.581 26.48 0 167 37 10 0 0 0 0.0016146 1 9103 53.557 53.557 1 3.3288 2.7851 0 44930000 11388000 33542000 14056 1569 5351 5482 21934 21934 GQNWLIYTYGVTNSGK 16 1 0 Unmodified _GQNWLIYTYGVTNSGK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 904.9576 2 900.949401 1799.88425 NaN NaN NaN 0.39756 0.00035818 NaN NaN NaN NaN 117.22 0.463 117.22 117.03 117.49 -7.6294E-06 0 0 0 0.000981 1 68967 65.295 49.404 1 NaN NaN 0 12937000 0 12937000 14057 1421 5352 5483 21935 21935 GQPLPDHLQMAVQGK 15 1 0 Oxidation (M) _GQPLPDHLQM(ox)AVQGK_ GQPLPDHLQM(1)AVQGK GQPLPDHLQM(58.89)AVQGK 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.2877 3 545.615485 1633.82463 80620.63 0.88523 0.00048299 -0.24709 -0.00013481 0.63814 0.00034818 545.615297284842 548.286916878101 49.754 0.44573 49.754 49.542 49.988 0 164 36 6 0 0 0 9.4417E-05 2 27978 58.885 58.885 1 1.0548 1.0838 0 32218000 14132000 18087000 14058 695 5353 5484 21936;21937 21936 534 GQPLPETLQLAVQGK 15 1 0 Unmodified _GQPLPETLQLAVQGK_ 0 0 0 P51531;A0A0U1RQZ9;F6VDE0;A0A0A0MT03;A0A1B0GWA8;A0A1B0GU54;Q56A76;Q6LC24 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.4506 2 789.94613 1577.87771 68839.9 1.0132 0.00080041 -0.041245 -3.2581E-05 0.972 0.00076782 790.447411232378 793.953109376781 100.09 0.59952 100.09 99.829 100.43 0 203 53 5 0 0 0 0.011842 1 61234 34.378 34.378 1 0.65985 0.6984 0 15650000 9642000 6008400 14059 1595 5354 5485 21938 21938 GQPLPETLQLAVQGK 15 1 0 Unmodified _GQPLPETLQLAVQGK_ 0 0 0 P51531;A0A0U1RQZ9;F6VDE0;A0A0A0MT03;A0A1B0GWA8;A0A1B0GU54;Q56A76;Q6LC24 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.9537 2 789.94613 1577.87771 69171.22 0.78416 0.00061944 -0.324 -0.00025594 0.46016 0.0003635 789.945865946703 793.952914873691 112.78 0.40401 112.78 112.56 112.96 0 84 17 6 0 0 0 0.00067637 1 64686 52.391 52.391 1 1.5605 1.2617 0 4344300 1534600 2809700 14060 1595 5354 5485 21939 21939 GQPVSTAVSAPNTVSSTPGQK 21 1 0 Unmodified _GQPVSTAVSAPNTVSSTPGQK_ 0 0 0 E7ETD6;Q12830;F5GXF5;J3QQK4 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1011.0245 2 1007.016 2012.01745 62017.54 0.27501 0.00027694 0.013524 1.3619E-05 0.28854 0.00029056 1007.51761041164 1011.02306315098 52.363 0.42924 52.363 52.218 52.647 3.8147E-06 124 30 6 0 0 0 1.4891E-07 3 29067 63.037 63.037 1 0.71068 0.74945 0 16369000 7180600 9188200 14061 1224 5355 5486 21940;21941;21942 21941 GQPVSTAVSAPNTVSSTPGQK 21 1 0 Unmodified _GQPVSTAVSAPNTVSSTPGQK_ 0 0 0 E7ETD6;Q12830;F5GXF5;J3QQK4 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1007.515 2 1007.016 2012.01745 61815 0.26149 0.00026333 0.14449 0.0001455 0.40598 0.00040883 1007.51757082434 1011.0230508223 51.481 0.37065 51.481 51.268 51.639 0 107 27 7 0 0 0 4.9027E-07 2 29122 58.885 58.885 1 0.88092 0.88273 0 13876000 8308500 5567800 14062 1224 5355 5486 21943;21944 21943 GQQSAEEENFK 11 1 0 Unmodified _GQQSAEEENFK_ 0 0 0 B3KWX6;Q53EY5;B3KX14;Q15014;Q5JXX6;Q5JXX1;Q5JXX2 B3KWX6 B3KWX6 MORF4L2 Mortality factor 4-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.7834 2 633.783481 1265.55241 79571.41 0.3074 0.00019482 0.019847 1.2579E-05 0.32725 0.0002074 633.783064471511 638.291835139137 20.845 0.21613 20.845 20.763 20.979 0 22 8 4 0 0 0 0.00015639 3 7286 94.692 89.708 1 1.1312 1.1487 0 6190800 1891600 4299200 14063 950 5356 5487 21945;21946;21947 21947 GQSEDPGSLLSLFR 14 0 1 Unmodified _GQSEDPGSLLSLFR_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;F5GZI0 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.3871 2 753.383362 1504.75217 70173.74 0.85192 0.00064182 0.14033 0.00010573 0.99225 0.00074755 753.383632167343 758.387206080814 121.89 0.44986 121.89 121.72 122.17 0 96 30 4 0 0 0 9.3689E-05 3 78865 86.313 70.773 1 1.1849 1.1986 0 7688300 3336700 4351500 14064 1072 5357 5488 21948;21949;21950 21949 GQSEDPGSLLSLFR 14 0 1 Unmodified _GQSEDPGSLLSLFR_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;F5GZI0 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.3868 2 753.383362 1504.75217 72545.43 1.0639 0.00080151 -0.15222 -0.00011468 0.91166 0.00068683 753.383782651658 758.38735727064 121.4 0.37631 121.4 121.25 121.63 0 102 28 5 0 0 0 7.4152E-05 2 80341 89.403 65.799 1 1.1395 1.1318 0 7306900 3390300 3916600 14065 1072 5357 5488 21951;21952 21951 GQSEDPGSLLSLFR 14 0 1 Unmodified _GQSEDPGSLLSLFR_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;F5GZI0 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 758.3871 2 753.383362 1504.75217 76909.55 1.1565 0.00087126 -0.43967 -0.00033124 0.7168 0.00054003 753.383749429065 758.386951441099 134.16 0.2205 134.16 134.02 134.24 0 33 12 5 0 0 0 0.030837 1 80912 30.889 15 1 1.7864 1.5124 0 3036600 1270300 1766300 14066 1072 5357 5488 21953 21953 GQSLGYAFAEFQEHEHALK 19 1 0 Unmodified _GQSLGYAFAEFQEHEHALK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.6832 3 721.348232 2161.02287 72507.84 0.67191 0.00048468 0.1647 0.00011881 0.83661 0.00060349 721.682560179232 724.019684857251 102.57 0.82396 102.57 102.28 103.11 0 294 57 8 0 0 0 8.6184E-05 2 58217 44.587 44.587 1 1.2334 0.95741 0 12750000 4721100 8029200 14067 214 5358 5489 21954;21955 21955 GQSLGYAFAEFQEHEHALK 19 1 0 Unmodified _GQSLGYAFAEFQEHEHALK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.3542 3 721.348232 2161.02287 71555.7 0.55305 0.00039894 0.12224 8.8176E-05 0.67528 0.00048711 721.682544839779 724.353870695918 102.29 0.74152 102.29 101.99 102.73 0 300 52 8 0 0 0 6.449E-06 1 57101 61.276 61.276 1 1.3048 1.0568 0 13322000 5357100 7965200 14068 214 5358 5489 21956 21956 GQSPAGDGSPEPPTPR 16 0 1 Unmodified _GQSPAGDGSPEPPTPR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.3704 2 775.365701 1548.71685 68869.66 0.71496 0.00055435 0.31147 0.00024151 1.0264 0.00079586 775.365813192088 780.369899052115 31.851 0.69455 31.851 31.471 32.165 0 377 65 8 0 0 0 8.9907E-05 2 15557 80.312 80.312 1 1.0221 1.1295 0 57053000 29751000 27302000 14069 2038 5359 5490 21957;21958 21957 GQSPAGDGSPEPPTPR 16 0 1 Unmodified _GQSPAGDGSPEPPTPR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.3679 2 775.365701 1548.71685 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.168 1 32.168 31.668 32.668 0 0 0 0 0.0049456 1 15927 52.071 31.941 1 14070 2038 5359 5490 21959 21959 GQSPAGDGSPEPPTPR 16 0 1 Unmodified _GQSPAGDGSPEPPTPR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.3672 2 775.365701 1548.71685 68789.13 0.57607 0.00044667 -0.020443 -1.5851E-05 0.55563 0.00043082 775.365545617604 780.369696849679 31.277 0.63872 31.277 30.938 31.577 0 319 54 8 0 0 0 1.7508E-08 2 15280 102.73 100.69 1 1.0246 1.1719 0 87619000 42346000 45273000 14071 2038 5359 5490 21960;21961 21961 GQSPAGDGSPEPPTPR 16 0 1 Unmodified _GQSPAGDGSPEPPTPR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.3698 2 775.365701 1548.71685 68469.27 0.51469 0.00039907 0.15247 0.00011822 0.66717 0.0005173 775.365570293987 780.369818385704 36.625 0.67193 36.625 36.277 36.949 0 383 60 8 0 0 0 0.010912 1 16282 33.195 33.195 1 1.4142 1.1869 0 26041000 11556000 14485000 14072 2038 5359 5490 21962 21962 GQSPAGDGSPEPPTPR 16 0 1 Unmodified _GQSPAGDGSPEPPTPR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.3647 2 775.365701 1548.71685 69285.25 0.53637 0.00041588 -0.039053 -3.028E-05 0.49732 0.0003856 775.365552828829 780.369764612421 36.777 0.81769 36.777 36.428 37.246 0 397 70 9 0 0 0 0.00015636 1 15912 74.649 74.649 1 1.4233 1.2416 0 27742000 11346000 16395000 14073 2038 5359 5490 21963 21963 GQTEHDEGMLEYLEDIIGCGR 21 0 1 Oxidation (M) _GQTEHDEGM(ox)LEYLEDIIGCGR_ GQTEHDEGM(1)LEYLEDIIGCGR GQTEHDEGM(53.91)LEYLEDIIGCGR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J578 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.0498 3 813.358139 2437.05259 68355.68 0.92898 0.00075559 -0.033963 -2.7624E-05 0.89502 0.00072797 813.692570979184 817.028960148692 113.68 0.78253 113.68 113.37 114.16 0 330 57 8 0 0 0 1.4804E-05 1 71861 53.909 53.909 1 1.0931 1.1326 0 22944000 10067000 12877000 14074 2070 5360 5491 21964 21964 1901 GQTEHDEGMLEYLEDIIGCGR 21 0 1 Oxidation (M) _GQTEHDEGM(ox)LEYLEDIIGCGR_ GQTEHDEGM(1)LEYLEDIIGCGR GQTEHDEGM(60.4)LEYLEDIIGCGR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J578 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.6932 3 813.358139 2437.05259 68151.16 0.6807 0.00055365 0.098317 7.9967E-05 0.77901 0.00063362 813.692663719974 817.363008321784 113.03 0.81712 113.03 112.68 113.5 -7.6294E-06 288 55 9 0 0 0 8.5414E-08 1 73151 60.398 59.868 1 0.84951 0.92744 0 29980000 10828000 19152000 14075 2070 5360 5491 21965 21965 1901 GQTHTLEDFQR 11 0 1 Unmodified _GQTHTLEDFQR_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.8854 3 444.549469 1330.62658 93219.59 0.048841 2.1712E-05 -0.12101 -5.3794E-05 -0.072168 -3.2082E-05 444.549385390241 447.885490241342 30.063 0.79916 30.063 29.7 30.499 0 219 63 5 0 0 0 0.018765 1 14597 25.014 20.499 1 1.5175 1.6396 0 26709000 10009000 16700000 14076 555 5361 5492 21966 21966 GQTHTLEDFQR 11 0 1 Unmodified _GQTHTLEDFQR_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3242 2 666.320565 1330.62658 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.115 1 30.115 29.615 30.615 0 0 0 0 3.24E-05 1 14692 87.298 65.167 1 14077 555 5361 5492 21967 21967 GQTHTLEDFQR 11 0 1 Unmodified _GQTHTLEDFQR_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3259 2 666.320565 1330.62658 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.316 1 30.316 29.816 30.816 1.9073E-06 0 0 0 0.010428 1 14830 58.63 43.369 1 14078 555 5361 5492 21968 21968 GQTHTLEDFQR 11 0 1 Unmodified _GQTHTLEDFQR_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3267 2 666.320565 1330.62658 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.336 1 30.336 29.836 30.836 0 0 0 0 0.051702 1 14845 43.297 30.681 1 14079 555 5361 5492 21969 21969 GQTSTYGFLK 10 1 0 Unmodified _GQTSTYGFLK_ 0 0 0 A0A087WWP4;Q96T37 A0A087WWP4 A0A087WWP4 RBM15 Putative RNA-binding protein 15 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.2889 2 551.282389 1100.55022 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.788 1 59.788 59.288 60.288 3.8147E-06 0 0 0 0.008093 1 34096 60.019 41.041 1 14080 427 5362 5493 21970 21970 GQTSTYGFLK 10 1 0 Unmodified _GQTSTYGFLK_ 0 0 0 A0A087WWP4;Q96T37 A0A087WWP4 A0A087WWP4 RBM15 Putative RNA-binding protein 15 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.2886 2 551.282389 1100.55022 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.561 1 58.561 58.061 59.061 -3.8147E-06 0 0 0 0.0041025 1 34066 65.305 38.921 1 14081 427 5362 5493 21971 21971 GQTTLPFRPVTQEEDDDQR 19 0 2 Unmodified _GQTTLPFRPVTQEEDDDQR_ 0 0 1 Q96SB8 Q96SB8 Q96SB8 SMC6 Structural maintenance of chromosomes protein 6 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.8384 3 744.689094 2231.04545 72228.64 0.42918 0.00031961 0.24993 0.00018612 0.67911 0.00050573 745.023943100164 751.361640526012 76.354 0.37299 76.354 76.146 76.519 0 96 24 6 0 0 0 0.019514 1 39872 30.152 30.152 1 1.4107 1.2692 0 2583400 1117300 1466100 14082 1989 5363 5494 21972 21972 GQVCVMIHSGSR 12 0 1 Oxidation (M) _GQVCVM(ox)IHSGSR_ GQVCVM(1)IHSGSR GQVCVM(91.85)IHSGSR 0 1 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.324 2 673.818821 1345.62309 74427.2 0.2929 0.00019736 -0.51648 -0.00034801 -0.22358 -0.00015065 673.818163368498 678.823468141711 24.787 0.19076 24.787 24.708 24.899 0 32 9 6 0 0 0 8.1E-05 2 10512 91.855 81.483 1 1.7483 1.7458 0 8792200 3717400 5074800 14083 2137 5364 5495 21973;21974 21974 1975 GQVCVMIHSGSR 12 0 1 Oxidation (M) _GQVCVM(ox)IHSGSR_ GQVCVM(1)IHSGSR GQVCVM(79.66)IHSGSR 0 1 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.8233 2 673.818821 1345.62309 NaN NaN NaN 0.25924 0.00017468 NaN NaN NaN NaN 24.527 0.21575 24.527 24.439 24.655 0 0 0 0 0.00040427 1 10283 79.659 68.829 1 NaN NaN 0 6382600 0 6382600 14084 2137 5364 5495 21975 21975 1975 GQVEVFALR 9 0 1 Unmodified _GQVEVFALR_ 0 0 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6;M0QX71 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.7879 2 509.787641 1017.56073 NaN NaN NaN -0.27957 -0.00014252 NaN NaN NaN NaN 80.663 0.58788 80.663 80.309 80.897 0 0 0 0 0.024365 1 47888 65.246 34.017 1 NaN NaN 0 16385000 16385000 0 14085 1922 5365 5496 21976 21976 GQVEVFALR 9 0 1 Unmodified _GQVEVFALR_ 0 0 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6;M0QX71 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.788 2 509.787641 1017.56073 NaN NaN NaN -0.10714 -5.4618E-05 NaN NaN NaN NaN 79.388 0.63326 79.388 79.096 79.729 0 0 0 0 0.013707 1 48216 73.26 50.241 1 NaN NaN 0 19172000 19172000 0 14086 1922 5365 5496 21977 21977 GQVEYLLK 8 1 0 Unmodified _GQVEYLLK_ 0 0 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.2716 2 475.271293 948.528032 88403.13 0.13382 6.3603E-05 0.3667 0.00017428 0.50052 0.00023788 475.271264768395 479.278553474361 61.827 0.77141 61.827 61.538 62.309 0 272 62 8 0 0 0 0.0086589 2 35348 77.674 54.526 1 0.61749 0.71247 0 218470000 130290000 88171000 14087 1568 5366 5497 21978;21979 21979 GQVEYLLK 8 1 0 Unmodified _GQVEYLLK_ 0 0 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2786 2 475.271293 948.528032 88109.98 0.0577 2.7423E-05 0.17013 8.0856E-05 0.22783 0.00010828 475.271192961292 479.27848025248 60.437 0.61166 60.437 60.173 60.785 0 177 38 8 0 0 0 0.012693 1 35346 67.032 48.227 1 0.66632 0.77736 0 264380000 149330000 115050000 14088 1568 5366 5497 21980 21980 GQVEYLLK 8 1 0 Unmodified _GQVEYLLK_ 0 0 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.2712 2 475.271293 948.528032 86952.58 -0.13307 -6.3245E-05 0.53945 0.00025638 0.40638 0.00019314 475.271480505833 479.278342393836 71.768 0.67946 71.768 71.421 72.101 0 192 45 8 0 0 0 0.012693 1 36925 67.032 47.396 1 0.25663 0.20927 0 25885000 20343000 5541900 14089 1568 5366 5497 21981 21981 GQVGGDVNVEMDAAPGVDLSR 21 0 1 Oxidation (M) _GQVGGDVNVEM(ox)DAAPGVDLSR_ GQVGGDVNVEM(1)DAAPGVDLSR GQVGGDVNVEM(77.73)DAAPGVDLSR 0 1 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1051.9958 2 1051.49457 2100.9746 NaN NaN NaN -0.27169 -0.00028568 NaN NaN NaN NaN 79.619 0.57255 79.619 79.392 79.964 0 0 0 0 2.0983E-09 1 47131 77.726 72.342 1 NaN NaN 0 22807000 22807000 0 + 14090 1150 5367 5498 21982 21982 856 GQVGGDVNVEMDAAPGVDLSR 21 0 1 Oxidation (M) _GQVGGDVNVEM(ox)DAAPGVDLSR_ GQVGGDVNVEM(1)DAAPGVDLSR GQVGGDVNVEM(87.57)DAAPGVDLSR 0 1 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1051.4946 2 1051.49457 2100.9746 NaN NaN NaN -0.2978 -0.00031314 NaN NaN NaN NaN 78.817 0.54813 78.817 78.548 79.096 0 0 0 0 3.8589E-13 1 47651 87.566 82.181 1 NaN NaN 0 31058000 31058000 0 + 14091 1150 5367 5498 21983 21983 856 GQVGGDVNVEMDAAPGVDLSR 21 0 1 Unmodified _GQVGGDVNVEMDAAPGVDLSR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1043.4939 2 1043.49712 2084.97968 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.196 1 93.196 92.696 93.696 7.6294E-06 0 0 0 0.032079 1 56508 34.82 25.287 1 + 14092 1150 5367 5499 21984 21984 GQVGGDVNVEMDAAPGVDLSR 21 0 1 Unmodified _GQVGGDVNVEMDAAPGVDLSR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1043.5004 2 1043.49712 2084.97968 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.219 1 93.219 92.719 93.719 -7.6294E-06 0 0 0 0.02582 1 56525 37.092 24.465 1 + 14093 1150 5367 5499 21985 21985 GQVLSTINTNQMNNTHAAVSPCGR 24 0 1 Oxidation (M) _GQVLSTINTNQM(ox)NNTHAAVSPCGR_ GQVLSTINTNQM(1)NNTHAAVSPCGR GQVLSTINTNQM(50.83)NNTHAAVSPCGR 0 1 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59;A0A0S2Z5C1 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.0264 3 862.743099 2585.20747 68652.2 0.85228 0.0007353 -0.45598 -0.00039339 0.3963 0.0003419 862.742537752005 866.747517387445 50.743 0.2576 50.743 50.627 50.885 0 60 23 5 0 0 0 5.8644E-07 1 28054 50.827 50.827 1 1.1448 1.1661 0 18581000 12519000 6061800 14094 582 5368 5500 21986 21986 435 GQVLSTINTNQMNNTHAAVSPCGR 24 0 1 Oxidation (M) _GQVLSTINTNQM(ox)NNTHAAVSPCGR_ GQVLSTINTNQM(1)NNTHAAVSPCGR GQVLSTINTNQM(66.87)NNTHAAVSPCGR 0 1 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59;A0A0S2Z5C1 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.0802 3 862.743099 2585.20747 67403.1 0.61206 0.00052805 0.029618 2.5553E-05 0.64168 0.0005536 863.077552262694 866.079905023674 49.456 0.25533 49.456 49.299 49.555 0 89 21 6 0 0 0 3.7453E-12 2 27765 66.871 64.03 1 1.0325 1.0396 0 19416000 11712000 7704300 14095 582 5368 5500 21987;21988 21987 435 GQVSEMAVLLIDPEPQIAALAK 22 1 0 Oxidation (M) _GQVSEM(ox)AVLLIDPEPQIAALAK_ GQVSEM(1)AVLLIDPEPQIAALAK GQVSEM(53.99)AVLLIDPEPQIAALAK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1155.6282 2 1155.12469 2308.23483 58006.44 0.31825 0.00036762 0.0074916 8.6537E-06 0.32574 0.00037628 1155.62605669568 1159.63369889951 126.21 0.43147 126.21 125.98 126.41 0 270 33 11 0 0 0 2.648E-07 2 82029 53.995 53.995 1 1.2917 1.4038 0 47229000 20604000 26626000 14096 908 5369 5501 21989;21990 21990 739 GQVSEMAVLLIDPEPQIAALAK 22 1 0 Oxidation (M) _GQVSEM(ox)AVLLIDPEPQIAALAK_ GQVSEM(1)AVLLIDPEPQIAALAK GQVSEM(110.44)AVLLIDPEPQIAALAK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1155.6244 2 1155.12469 2308.23483 57585.67 0.34869 0.00040278 -0.058099 -6.7112E-05 0.29059 0.00033566 1155.62615888698 1159.6336993295 125.82 0.45573 125.82 125.61 126.06 0 196 28 10 0 0 0 1.5181E-16 2 83787 110.44 110.44 1 1.3164 1.4718 0 53369000 24029000 29339000 14097 908 5369 5501 21991;21992 21991 739 GQVSESEDSITK 12 1 0 Unmodified _GQVSESEDSITK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.3044 2 640.304246 1278.59394 75666.63 0.8348 0.00053453 0.24666 0.00015794 1.0815 0.00069246 640.304347202098 644.311467161809 24.408 0.60701 24.408 24.014 24.621 0 114 24 8 0 0 0 1.3299E-12 2 10039 129.16 124.54 1 0.91672 1.0334 0 76081000 39805000 36276000 14098 1803 5370 5502 21993;21994 21993 GQVSESEDSITK 12 1 0 Unmodified _GQVSESEDSITK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.3116 2 640.304246 1278.59394 75036.49 0.261 0.00016712 0.34656 0.00022191 0.60756 0.00038902 640.304476302251 644.311491381471 24.054 0.49942 24.054 23.904 24.403 0 98 19 8 0 0 0 3.8242E-08 1 9877 116.77 112.15 1 0.97157 1.0858 0 87993000 41161000 46832000 14099 1803 5370 5502 21995 21995 GQVSESEDSITK 12 1 0 Unmodified _GQVSESEDSITK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.3118 2 640.304246 1278.59394 75284.37 0.56181 0.00035973 -0.12189 -7.8049E-05 0.43992 0.00028168 640.304209303359 644.311216582277 27.405 0.56023 27.405 27.142 27.702 0 129 24 8 0 0 0 0.00014324 2 10616 93.258 93.258 1 1.5585 1.2085 0 13836000 5440200 8395400 14100 1803 5370 5502 21996;21997 21997 GQVSESEDSITK 12 1 0 Unmodified _GQVSESEDSITK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.3113 2 640.304246 1278.59394 75478.07 0.28146 0.00018022 0.15644 0.00010017 0.43791 0.00028039 640.304351362192 644.311432780357 27.542 0.64281 27.542 27.22 27.863 0 112 25 8 0 0 0 4.9915E-06 2 10229 110.39 110.39 1 1.5435 1.2672 0 9274100 3402200 5871800 14101 1803 5370 5502 21998;21999 21999 GQVTFLSIHPSGK 13 1 0 Unmodified _GQVTFLSIHPSGK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.2569 3 457.585743 1369.7354 88336.66 0.26567 0.00012157 0.065398 2.9925E-05 0.33107 0.00015149 457.585710610153 460.257217564685 69.235 0.59781 69.235 68.998 69.595 -7.6294E-06 315 50 8 0 0 0 0.00032251 2 40146 50.532 50.532 1 1.0451 1.1731 0 67449000 31183000 36267000 14102 580 5371 5503 22000;22001 22001 GQVTFLSIHPSGK 13 1 0 Unmodified _GQVTFLSIHPSGK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8826 2 685.874976 1369.7354 73943.27 0.63545 0.00043584 -0.112 -7.6818E-05 0.52346 0.00035902 685.875174605146 689.881965694381 69.241 0.58784 69.241 69.007 69.595 0 262 49 8 0 0 0 0.00011214 1 40173 74.962 74.962 1 1.3589 1.506 0 58646000 21075000 37571000 14103 580 5371 5503 22002 22002 GQVTFLSIHPSGK 13 1 0 Unmodified _GQVTFLSIHPSGK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.8754 2 685.874976 1369.7354 73199.04 0.44984 0.00030853 0.010801 7.4084E-06 0.46064 0.00031594 685.875026777099 689.882053011905 67.683 0.50666 67.683 67.449 67.956 0 219 43 8 0 0 0 3.8425E-06 2 40063 107.85 107.85 1 0.99319 1.1099 0 95192000 45031000 50161000 14104 580 5371 5503 22003;22004 22004 GQVTFLSIHPSGK 13 1 0 Unmodified _GQVTFLSIHPSGK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.5858 3 457.585743 1369.7354 88438.85 0.091314 4.1784E-05 0.092965 4.2539E-05 0.18428 8.4323E-05 457.585746435718 460.257207237689 67.694 0.50666 67.694 67.449 67.956 0 250 43 8 0 0 0 0.0011215 2 40109 38.799 37.613 1 1.0476 1.1707 0 88328000 47265000 41062000 14105 580 5371 5503 22005;22006 22006 GQVTFLSIHPSGK 13 1 0 Unmodified _GQVTFLSIHPSGK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.8828 2 685.874976 1369.7354 73494.66 0.55358 0.00037969 0.084366 5.7865E-05 0.63794 0.00043755 685.87526145876 689.882161683343 78.982 0.67934 78.982 78.71 79.389 0 203 38 8 0 0 0 0.00012265 2 42399 77.593 73.295 1 1.4484 1.1778 0 29614000 11903000 17711000 14106 580 5371 5503 22007;22008 22007 GQVTFLSIHPSGK 13 1 0 Unmodified _GQVTFLSIHPSGK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.2574 3 457.585743 1369.7354 87917.85 0.2624 0.00012007 0.040332 1.8455E-05 0.30273 0.00013853 457.585722156376 460.25709856533 78.987 0.69567 78.987 78.678 79.374 0 237 39 10 0 0 0 0.0037726 2 42402 36.519 36.519 1 1.2807 1 0 16061000 7175400 8886100 14107 580 5371 5503 22009;22010 22009 GQVTFLSIHPSGK 13 1 0 Unmodified _GQVTFLSIHPSGK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.8823 2 685.874976 1369.7354 74340.16 0.50309 0.00034505 0.10972 7.5253E-05 0.61281 0.00042031 685.87514078305 689.882100457096 79.022 0.70026 79.022 78.728 79.428 0 244 42 9 0 0 0 0.00021605 2 41555 69.721 69.721 1 1.3299 1.0661 0 21862000 9669500 12192000 14108 580 5371 5503 22011;22012 22011 GQVTFLSIHPSGK 13 1 0 Unmodified _GQVTFLSIHPSGK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 460.2575 3 457.585743 1369.7354 88705.13 -0.0024968 -1.1425E-06 0.14462 6.6175E-05 0.14212 6.5033E-05 457.585767310103 460.257213827548 79.019 0.72677 79.019 78.624 79.351 -7.6294E-06 240 46 8 0 0 0 0.003729 2 41588 29.355 29.355 1 1.3494 1.1057 0 12484000 5235000 7249300 14109 580 5371 5503 22013;22014 22013 GQVVENNSVTEFSEEK 16 1 0 Unmodified _GQVVENNSVTEFSEEK_ 0 0 0 Q9BVS4;H0Y919;Q9NVB0 Q9BVS4 Q9BVS4 RIOK2 Serine/threonine-protein kinase RIO2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.4281 2 898.42087 1794.82719 NaN NaN NaN 0.012568 1.1291E-05 NaN NaN NaN NaN 56.368 0.21203 56.368 56.241 56.453 -3.8147E-06 0 0 0 0.0035732 1 32392 55.899 50.054 1 NaN NaN 0 3554600 0 3554600 14110 2010 5372 5504 22015 22015 GQWINLPVLQLTK 13 1 0 Unmodified _GQWINLPVLQLTK_ 0 0 0 B4DDU7;Q53HS1;Q9NRG9;F8VUB6 B4DDU7 B4DDU7 AAAS Aladin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.451 2 755.443026 1508.8715 74492.02 0.84589 0.00063902 0.016382 1.2376E-05 0.86227 0.0006514 755.944447323897 759.45006483027 126.35 0.36895 126.35 126.17 126.54 0 83 27 4 0 0 0 0.010789 1 82119 41.283 41.283 1 1.9266 1.9855 0 4201400 1312800 2888600 14111 961 5373 5505 22016 22016 GQWINLPVLQLTK 13 1 0 Unmodified _GQWINLPVLQLTK_ 0 0 0 B4DDU7;Q53HS1;Q9NRG9;F8VUB6 B4DDU7 B4DDU7 AAAS Aladin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.4434 2 755.443026 1508.8715 72963.46 0.90979 0.00068729 -0.097769 -7.3859E-05 0.81202 0.00061343 755.443164983437 759.449694152855 125.86 0.39514 125.86 125.72 126.11 7.6294E-06 67 24 5 0 0 0 0.00016902 1 83862 72.006 72.006 1 1.5791 1.6354 0 4727600 1920300 2807200 14112 961 5373 5505 22017 22017 GQYISPFHDIPIYADK 16 1 0 Unmodified _GQYISPFHDIPIYADK_ 0 0 0 V9HWB5;Q15181;Q5SQT6 V9HWB5 V9HWB5 HEL-S-66p;PPA1 Inorganic pyrophosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.6523 3 621.98071 1862.9203 NaN NaN NaN 0.1675 0.00010418 NaN NaN NaN NaN 100.55 0.67625 100.55 100.23 100.91 0 0 0 0 0.007226 1 61469 40.493 36.391 1 NaN NaN 0 8361600 0 8361600 14113 1755 5374 5506 22018 22018 GRAPQVLVLAPTR 13 0 2 Unmodified _GRAPQVLVLAPTR_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 466.621 3 459.949016 1376.82522 89229.3 0.13484 6.2018E-05 -0.0699 -3.215E-05 0.064938 2.9868E-05 459.948944369564 466.621117831705 77.096 0.47725 77.096 76.901 77.379 0 152 32 7 0 0 0 0.0080951 1 41138 36.292 36.292 1 1.1215 0.96111 0 5730700 2394700 3336100 14114 2065 5375 5507 22019 22019 GRAPQVLVLAPTR 13 0 2 Unmodified _GRAPQVLVLAPTR_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.6214 3 459.949016 1376.82522 90433 0.088199 4.0567E-05 0.087506 4.0248E-05 0.17571 8.0815E-05 459.949065389998 466.621145252341 77.121 0.405 77.121 76.922 77.327 0 117 25 6 0 0 0 0.00051028 1 40423 59.185 59.185 1 1.0561 0.95602 0 4584100 2029300 2554800 14115 2065 5375 5507 22020 22020 GRDDCGTFEDTGPLLQFDYK 20 1 1 Unmodified _GRDDCGTFEDTGPLLQFDYK_ 0 0 1 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.1107 3 778.682952 2333.02703 69885 0.37601 0.00029279 0.32048 0.00024955 0.69648 0.00054234 779.017515719891 785.025008021615 103.39 0.66934 103.39 103.07 103.74 0 232 55 6 0 0 0 0.051412 1 65477 21.165 21.165 1 1.0063 1.1476 0 20218000 10353000 9865100 14116 1740 5376 5508 22021 22021 GRDDCGTFEDTGPLLQFDYK 20 1 1 Unmodified _GRDDCGTFEDTGPLLQFDYK_ 0 0 1 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.6835 3 778.682952 2333.02703 68615 0.99535 0.00077506 -0.41608 -0.00032399 0.57927 0.00045107 779.017089772274 785.024639766103 115.24 0.64822 115.24 114.97 115.62 0 201 31 11 0 0 0 2.499E-06 2 67422 56.247 55.956 1 1.7405 1.5027 0 13408000 5406700 8001300 14117 1740 5376 5508 22022;22023 22023 GRDDCGTFEDTGPLLQFDYK 20 1 1 Unmodified _GRDDCGTFEDTGPLLQFDYK_ 0 0 1 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 785.0253 3 778.682952 2333.02703 68522.45 0.73008 0.0005685 -0.045338 -3.5304E-05 0.68474 0.0005332 779.017190060444 785.024928724168 115.19 0.79369 115.19 114.91 115.7 -7.6294E-06 234 37 10 0 0 0 9.5364E-07 3 66487 69.779 69.779 1 1.685 1.4257 0 11490000 3795400 7694600 14118 1740 5376 5508 22024;22025;22026 22026 GRDLEQILSQYITFVK 16 1 1 Unmodified _GRDLEQILSQYITFVK_ 0 0 1 A0A024R912;Q9BZX2 A0A024R912 A0A024R912 UCK2 Uridine kinase;Uridine-cytidine kinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.3592 3 637.350914 1909.03091 76870.66 0.78389 0.00049961 0.29702 0.00018931 1.0809 0.00068892 637.68601772803 643.358332591072 133.12 0.16464 133.12 133.03 133.19 0 21 5 6 0 0 0 2.3066E-12 1 89311 115.31 103.03 1 2.3438 2.6493 0 15495000 4195700 11299000 14119 268 5377 5509 22027 22027 GRDPALPTLLNPK 13 1 1 Unmodified _GRDPALPTLLNPK_ 0 0 1 Q58F09;Q13724;A8K9K4;C9J8D4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.6047 3 464.605026 1390.79325 92616.59 0.18847 8.7565E-05 -0.055403 -2.574E-05 0.13307 6.1824E-05 464.604875401778 470.612561333295 77.516 0.37318 77.516 77.353 77.726 0 90 28 5 0 0 0 0.0091244 1 45800 35.809 35.809 1 0.87215 0.97815 0 6612000 3678300 2933700 14120 1720 5378 5510 22028 22028 GRDVESVQTPSK 12 1 1 Unmodified _GRDVESVQTPSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8369 2 651.836048 1301.65754 76516.8 0.16426 0.00010707 0.26595 0.00017336 0.43021 0.00028043 651.83632154305 660.847324450383 18.733 0.50998 18.733 18.445 18.955 0 124 29 6 0 0 0 0.0001392 2 5549 100.69 81.907 1 1.6826 1.9883 0 37863000 15598000 22266000 14121 1569 5379 5511 22029;22030 22030 GRDVESVQTPSK 12 1 1 Unmodified _GRDVESVQTPSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8366 2 651.836048 1301.65754 75101.95 0.65811 0.00042898 -0.16567 -0.00010799 0.49244 0.00032099 651.835900152182 660.847112745093 18.797 0.49965 18.797 18.551 19.051 0 211 36 8 0 0 0 2.8232E-07 2 5314 113.61 92.161 1 1.7747 2.0557 0 34344000 9695400 24649000 14122 1569 5379 5511 22031;22032 22032 GRDVIAQSQSGTGK 14 1 1 Unmodified _GRDVIAQSQSGTGK_ 0 0 1 A0A024R8W0;P38919;I3L3H2 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.0054 2 702.365504 1402.71645 71425.52 0.50359 0.00035371 -0.065735 -4.617E-05 0.43786 0.00030754 702.365469605432 711.376678171613 17.127 0.24577 17.127 17.021 17.266 0 35 6 8 0 0 0 7.3687E-37 2 4310 167.32 167.32 1 2.1658 2.4956 0 27749000 7989400 19759000 14123 261 5380 5512 22033;22034 22033 GRDVIAQSQSGTGK 14 1 1 Unmodified _GRDVIAQSQSGTGK_ 0 0 1 A0A024R8W0;P38919;I3L3H2 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.5798 3 468.579428 1402.71645 87657.72 0.063937 2.996E-05 0.3184 0.00014919 0.38233 0.00017915 468.579505343882 474.586902584645 17.133 0.21904 17.133 17.047 17.266 0 21 5 5 0 0 0 0.00083699 2 4335 40.237 40.237 1 1.9571 2.1102 0 11074000 3630900 7442600 14124 261 5380 5512 22035;22036 22035 GRDVIAQSQSGTGK 14 1 1 Unmodified _GRDVIAQSQSGTGK_ 0 0 1 A0A024R8W0;P38919;I3L3H2 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3764 2 702.365504 1402.71645 73514.71 1.1217 0.00078788 -0.62729 -0.00044059 0.49446 0.00034729 702.365490132251 711.376339807718 17.025 0.15841 17.025 16.937 17.096 0 19 5 6 0 0 0 8.7685E-09 1 4053 119.39 119.39 1 2.8426 3.1391 0 2855500 767150 2088300 14125 261 5380 5512 22037 22037 GRGGGGGGGGGGGGRERDRR 20 0 5 Unmodified _GRGGGGGGGGGGGGRERDRR_ 0 0 4 P0DN76;Q01081;Q7Z780;B5BU08 P0DN76 P0DN76 U2AF1 Splicing factor U2AF 35 kDa subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.6456 3 595.628838 1783.86468 81928.88 0.29531 0.00017589 0.21142 0.00012593 0.50673 0.00030182 596.295179973913 612.310908962229 92.675 0.40165 92.675 92.46 92.862 0 75 24 5 0 0 0 0.054658 1 50788 7.6978 7.6978 1 0.46778 0.57625 0 1877400 1077900 799560 14126 1463 5381 5513 22038 22038 GRGVTFLFPIQAK 13 1 1 Unmodified _GRGVTFLFPIQAK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.6216 3 478.613633 1432.81907 87212.87 0.50021 0.00023941 -0.18609 -8.9064E-05 0.31412 0.00015034 478.613508688261 484.955402348599 111.94 0.31503 111.94 111.8 112.11 -7.6294E-06 60 20 5 0 0 0 0.033537 1 64897 18.731 18.731 1 1.9797 1.7652 0 2154500 926150 1228400 14127 2065 5382 5514 22039 22039 GRHEVGALVR 10 0 2 Unmodified _GRHEVGALVR_ 0 0 1 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 365.2122 3 365.212351 1092.61522 99360.57 0.015076 5.506E-06 -0.89909 -0.00032836 -0.88402 -0.00032285 365.211659163473 371.884358770022 20.119 0.35299 20.119 19.997 20.35 0 31 12 5 0 0 0 0.013117 1 6473 34.773 22.56 1 0.81646 0.84337 0 12513000 7191000 5321500 14128 1286 5383 5515 22040 22040 GRIPLLLTSLSFK 13 1 1 Unmodified _GRIPLLLTSLSFK_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.9596 2 722.947944 1443.88134 73226.15 0.7981 0.00057699 -0.1334 -9.6445E-05 0.6647 0.00048054 722.947831481507 731.959244023606 115.03 0.77525 115.03 114.66 115.44 0 237 50 8 0 0 0 0.0011427 2 74956 85.813 85.813 1 0.97067 1.1026 0 18041000 7937300 10104000 14129 1741 5384 5516 22041;22042 22042 GRIPLLLTSLSFK 13 1 1 Unmodified _GRIPLLLTSLSFK_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 482.3014 3 482.301055 1443.88134 86667.34 0.58867 0.00028392 -0.19766 -9.5332E-05 0.39101 0.00018859 482.300993214549 488.308297673621 126.23 0.67306 126.23 125.96 126.63 0 110 24 8 0 0 0 0.0039472 2 75894 43.813 35.508 1 1.2071 1.0109 0 6688000 3557700 3130300 14130 1741 5384 5516 22043;22044 22044 GRIPLLLTSLSFK 13 1 1 Unmodified _GRIPLLLTSLSFK_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.9603 2 722.947944 1443.88134 71290.75 0.76558 0.00055347 0.19175 0.00013863 0.95733 0.0006921 722.94795544297 731.959311686488 125.89 0.42342 125.89 125.67 126.1 7.6294E-06 114 19 8 0 0 0 0.0063545 1 74662 72.29 72.29 1 1.3697 1.1603 0 14575000 5923100 8652300 14131 1741 5384 5516 22045 22045 GRIPLLLTSLSFK 13 1 1 Unmodified _GRIPLLLTSLSFK_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.3084 3 482.301055 1443.88134 87920.66 0.42781 0.00020633 0.046954 2.2646E-05 0.47476 0.00022898 482.300993431566 488.308498221585 125.89 0.42258 125.89 125.72 126.14 0 104 19 8 0 0 0 0.022265 1 74693 29.638 29.638 1 1.4185 1.1925 0 7266000 2976100 4289900 14132 1741 5384 5516 22046 22046 GRPDPYAYIPLNR 13 0 2 Unmodified _GRPDPYAYIPLNR_ 0 0 1 B3KMR5;Q5JTH9;B3KY97;B3KPQ2 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.6063 3 511.272047 1530.79431 83514.03 0.57274 0.00029283 -0.20163 -0.00010309 0.37111 0.00018974 511.271739892048 517.944163548762 91.438 0.75641 91.438 91.077 91.833 0 246 53 8 0 0 0 0.0024152 2 50740 40.477 40.477 1 1.0775 0.91526 0 8033800 3717300 4316400 14133 907 5385 5517 22047;22048 22047 GRPDPYAYIPLNR 13 0 2 Unmodified _GRPDPYAYIPLNR_ 0 0 1 B3KMR5;Q5JTH9;B3KY97;B3KPQ2 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.2715 3 511.272047 1530.79431 83467.41 0.32112 0.00016418 -0.037452 -1.9148E-05 0.28366 0.00014503 511.606262697571 517.94421914541 91.189 0.55283 91.189 90.917 91.47 0 194 37 7 0 0 0 0.0025261 2 49766 39.005 34.536 1 1.0746 0.97639 0 6243100 2717000 3526100 14134 907 5385 5517 22049;22050 22049 GRPGSGTSGVDSLSNFIESVK 21 1 1 Unmodified _GRPGSGTSGVDSLSNFIESVK_ 0 0 1 B9ZVT1;Q8IXT5;E5RHG1;E5RJ83;E5RJV8 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.0298 3 698.686914 2093.03891 73059.36 0.76039 0.00053127 0.073529 5.1373E-05 0.83392 0.00058265 699.021321389523 704.694615540823 103.01 0.66884 103.01 102.62 103.29 7.6294E-06 195 57 5 0 0 0 5.018E-07 1 63541 52.99 52.99 1 1.1132 1.2019 0 14614000 8580400 6033600 14135 1122 5386 5518 22051 22051 GRPGSGTSGVDSLSNFIESVK 21 1 1 Unmodified _GRPGSGTSGVDSLSNFIESVK_ 0 0 1 B9ZVT1;Q8IXT5;E5RHG1;E5RJ83;E5RJV8 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.6958 3 698.686914 2093.03891 72516.22 0.50961 0.00035606 -0.020796 -1.453E-05 0.48882 0.00034153 699.021211780007 704.694631009508 101.98 0.58994 101.98 101.63 102.22 0 185 45 5 0 0 0 1.4534E-15 2 64156 100.28 100.28 1 1.0498 1.2053 0 24793000 12435000 12358000 14136 1122 5386 5518 22052;22053 22053 GRPGSGTSGVDSLSNFIESVK 21 1 1 Unmodified _GRPGSGTSGVDSLSNFIESVK_ 0 0 1 B9ZVT1;Q8IXT5;E5RHG1;E5RJ83;E5RJV8 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.0294 3 698.686914 2093.03891 73869.88 0.78945 0.00055158 0.17859 0.00012478 0.96804 0.00067636 699.02148091306 704.694381798421 114.85 0.40147 114.85 114.64 115.04 7.6294E-06 84 18 6 0 0 0 0.0024627 1 67166 26.239 23.049 1 1.0806 0.89397 0 5569900 2206800 3363200 14137 1122 5386 5518 22054 22054 GRPISHSTTEDLK 13 1 1 Unmodified _GRPISHSTTEDLK_ 0 0 1 Q9H501;Q05C10;Q8IWH6;Q3SWV1;Q6P6H6 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.9193 3 480.919562 1439.73686 83419.74 -0.25357 -0.00012195 -0.26816 -0.00012896 -0.52173 -0.00025091 480.919589130101 486.927301401428 17.465 0.31171 17.465 17.32 17.632 1.9073E-06 35 11 5 0 0 0 0.0018267 1 4441 42.785 28.432 1 0.78942 0.87434 0 8278700 4466700 3811900 14138 2033 5387 5519 22055 22055 GRPYSVPPCVEEALGQK 17 1 1 Unmodified _GRPYSVPPCVEEALGQK_ 0 0 1 A0A0A6YYG7;Q6IBW4 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.9948 3 629.652487 1885.93563 78512.8 0.77522 0.00048812 -1.0987 -0.00069178 -0.32345 -0.00020366 630.318902973391 635.994181590217 83.982 0.99261 83.982 83.391 84.383 7.6294E-06 220 78 6 0 0 0 0.00062011 1 50347 41.513 33.732 1 0.64351 0.75273 0 31996000 15782000 16214000 14139 491 5388 5520 22056 22056 GRPYSVPPCVEEALGQK 17 1 1 Unmodified _GRPYSVPPCVEEALGQK_ 0 0 1 A0A0A6YYG7;Q6IBW4 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.6602 3 629.652487 1885.93563 76385.02 0.77162 0.00048585 -0.26505 -0.00016689 0.50657 0.00031896 629.986771045288 635.660015513076 96.251 0.80614 96.251 95.825 96.631 0 280 50 9 0 0 0 0.0028698 1 53974 34.202 34.202 1 2.212 1.8416 0 6128700 1994600 4134100 14140 491 5388 5520 22057 22057 GRPYTLSVALPGSILDNAQSPELR 24 0 2 Unmodified _GRPYTLSVALPGSILDNAQSPELR_ 0 0 1 Q5T280 Q5T280 Q5T280 C9orf114 Putative methyltransferase C9orf114 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.4588 3 852.125643 2553.3551 NaN NaN NaN -1.3028 -0.0011101 NaN NaN NaN NaN 114.05 0.48596 114.05 113.88 114.36 0 0 0 0 2.8565E-05 1 74103 45.735 34.435 1 NaN NaN 0 5353300 5353300 0 14141 1819 5389 5521 22058 22058 GRPYTLSVALPGSILDNAQSPELR 24 0 2 Unmodified _GRPYTLSVALPGSILDNAQSPELR_ 0 0 1 Q5T280 Q5T280 Q5T280 C9orf114 Putative methyltransferase C9orf114 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.132 3 852.125643 2553.3551 64912.13 0.86213 0.00073464 -0.2415 -0.00020579 0.62063 0.00052885 852.459404308636 859.131550064716 125.57 0.42921 125.57 125.35 125.78 0 93 16 9 0 0 0 8.1713E-06 3 75380 42.454 42.454 1 0.72543 0.6058 0 15477000 7437500 8039300 14142 1819 5389 5521 22059;22060;22061 22060 GRPYTLSVALPGSILDNAQSPELR 24 0 2 Unmodified _GRPYTLSVALPGSILDNAQSPELR_ 0 0 1 Q5T280 Q5T280 Q5T280 C9orf114 Putative methyltransferase C9orf114 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 852.7961 3 852.125643 2553.3551 65925.41 0.79302 0.00067575 -0.012159 -1.0361E-05 0.78086 0.00066539 852.460142369004 859.132109953425 125.39 0.44226 125.39 125.15 125.59 0 100 18 8 0 0 0 0.056558 1 74334 12.612 12.612 1 0.92367 0.85455 0 20219000 10774000 9445400 14143 1819 5389 5521 22062 22062 GRRPVLPR 8 0 3 Unmodified _GRRPVLPR_ 0 0 2 Q9Y3A4;Q9NSQ0 Q9Y3A4 Q9Y3A4 RRP7A;RRP7BP Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 317.5382 3 317.538399 949.593367 NaN NaN NaN -0.31453 -9.9874E-05 NaN NaN NaN NaN 18.542 0.23037 18.542 18.435 18.666 0 0 0 0 0.034022 1 5254 42.109 32.895 1 NaN NaN 0 2473200 2473200 0 14144 2133 5390 5522 22063 22063 GSAFAALHR 9 0 1 Unmodified _GSAFAALHR_ 0 0 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.2525 2 465.251226 928.487899 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.356 1 32.356 31.856 32.856 0 0 0 0 0.04842 1 16026 47.082 25.154 1 14145 2068 5391 5523 22064 22064 GSAFAIGSDGLCCQSR 16 0 1 Unmodified _GSAFAIGSDGLCCQSR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.8779 2 843.372146 1684.72974 67424.33 0.74497 0.00062829 -0.63728 -0.00053747 0.10769 9.0821E-05 843.873923896514 848.375541018175 75.029 0.55566 75.029 74.738 75.293 0 171 44 6 0 0 0 6.9695E-07 3 43942 97.911 96.438 1 1.1968 1.2549 0 12244000 4714100 7530300 14146 452 5392 5524 22065;22066;22067 22065 GSAFAIGSDGLCCQSR 16 0 1 Unmodified _GSAFAIGSDGLCCQSR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.874 2 843.372146 1684.72974 66842.96 0.67592 0.00057005 -0.5587 -0.00047119 0.11722 9.8859E-05 843.371484596251 848.375999200376 73.955 0.58028 73.955 73.645 74.225 -7.6294E-06 200 46 6 0 0 0 0.00014825 3 44410 75.479 73.066 1 1.6408 1.6333 0 16404000 6599300 9804400 14147 452 5392 5524 22068;22069;22070 22069 GSAFAIGSDGLCCQSR 16 0 1 Unmodified _GSAFAIGSDGLCCQSR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.3771 2 843.372146 1684.72974 66600.74 0.60569 0.00051082 -0.37078 -0.0003127 0.23491 0.00019812 843.873480493152 848.376205207998 85.51 0.58205 85.51 85.227 85.809 0 180 36 7 0 0 0 0.0024689 2 46671 40.767 40.767 1 1.4713 1.2389 0 4592100 1861500 2730600 14148 452 5392 5524 22071;22072 22071 GSAFAIGSDGLCCQSR 16 0 1 Unmodified _GSAFAIGSDGLCCQSR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 843.3718 2 843.372146 1684.72974 66856.57 0.6139 0.00051774 -0.34838 -0.00029381 0.26552 0.00022393 843.873578521888 848.376239471135 85.72 0.77859 85.72 85.403 86.181 0 200 44 6 0 0 0 0.010912 2 46071 33.195 33.195 1 1.6441 1.4538 0 3947200 1628000 2319200 14149 452 5392 5524 22073;22074 22074 GSAGDGFHGDVYLTVK 16 1 0 Unmodified _GSAGDGFHGDVYLTVK_ 0 0 0 P49916;B7Z6I3;K7ERZ5;K7EQB6 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.8936 2 811.894094 1621.77364 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.19 1 67.19 66.69 67.69 0 0 0 0 0.0070326 1 39774 49.448 34.782 1 14150 1589 5393 5525 22075 22075 GSAITGPVAK 10 1 0 Unmodified _GSAITGPVAK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.7612 2 450.761092 899.507631 89522 0.10639 4.7956E-05 -0.37812 -0.00017044 -0.27173 -0.00012249 450.761012092098 454.767915988557 27.687 0.8269 27.687 27.317 28.144 0 301 55 9 0 0 0 0.00034412 2 12722 89.355 68.73 1 0.73579 0.88309 0 1063800000 601870000 461920000 14151 84 5394 5526 22076;22077 22077 GSAITGPVAK 10 1 0 Unmodified _GSAITGPVAK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.7614 2 450.761092 899.507631 89046.91 0.0066732 3.008E-06 -0.1341 -6.0447E-05 -0.12743 -5.7439E-05 450.761179112955 454.767991135874 27.27 0.93275 27.27 26.862 27.795 0 232 47 8 0 0 0 3.5718E-05 3 12442 99.442 67.3 1 0.72929 0.86031 0 812680000 482390000 330290000 14152 84 5394 5526 22078;22079;22080 22079 GSAITGPVAK 10 1 0 Unmodified _GSAITGPVAK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 454.768 2 450.761092 899.507631 87164.83 0.026716 1.2043E-05 -0.3391 -0.00015285 -0.31238 -0.00014081 450.761068767204 454.767921199372 30.664 1.0236 30.664 30.364 31.388 0 324 65 9 0 0 0 0.0017496 2 12658 72.23 52.092 1 1.7125 1.4788 0 106220000 38850000 67367000 14153 84 5394 5526 22081;22082 22081 GSAITGPVAK 10 1 0 Unmodified _GSAITGPVAK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KTJ3 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 454.7678 2 450.761092 899.507631 86561.13 -0.16379 -7.3832E-05 0.1452 6.5449E-05 -0.018596 -8.3823E-06 450.761277670793 454.768130882649 30.672 1.1982 30.672 30.345 31.543 0 286 64 8 0 0 0 0.016025 2 12152 48.423 43.221 1 1.7271 1.4704 0 84663000 32009000 52654000 14154 84 5394 5526 22083;22084 22083 GSALAALHCGRPPESPVNYGSPPSIADTLFSR 32 0 2 Unmodified _GSALAALHCGRPPESPVNYGSPPSIADTLFSR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1115.8933 3 1108.88585 3323.63571 57260.5 0.39039 0.0004329 0.47433 0.00052598 0.86472 0.00095888 1109.55338246865 1115.89307106213 119.49 0.38116 119.49 119.25 119.63 0 109 14 12 0 0 0 2.0397E-07 1 70687 37.461 35.431 1 1.0811 0.89922 0 18055000 9883500 8171200 14155 1942 5395 5527 22085 22085 GSATNYITR 9 0 1 Unmodified _GSATNYITR_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.7555 2 491.751256 981.487959 NaN NaN NaN -0.20189 -9.9279E-05 NaN NaN NaN NaN 28.673 0.3645 28.673 28.485 28.85 0 0 0 0 0.0042327 1 13609 76.827 56.545 1 NaN NaN 0 58515000 0 58515000 14156 886 5396 5528 22086 22086 GSATNYITR 9 0 1 Unmodified _GSATNYITR_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.7516 2 491.751256 981.487959 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.698 1 28.698 28.198 29.198 0 0 0 0 2.3184E-11 1 13634 135 104.41 1 14157 886 5396 5528 22087 22087 GSATNYITR 9 0 1 Unmodified _GSATNYITR_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.7552 2 491.751256 981.487959 NaN NaN NaN -0.086893 -4.273E-05 NaN NaN NaN NaN 28.04 0.36398 28.04 27.871 28.235 0 0 0 0 0.00095118 1 13251 88.819 68.299 1 NaN NaN 0 75588000 0 75588000 14158 886 5396 5528 22088 22088 GSATNYITR 9 0 1 Unmodified _GSATNYITR_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.7555 2 491.751256 981.487959 86062.27 0.00041507 2.0411E-07 0.51654 0.00025401 0.51695 0.00025421 491.751264083868 496.755395323314 32.494 0.70505 32.494 32.269 32.974 -3.8147E-06 111 33 7 0 0 0 1.3291E-05 2 13971 123.98 94.834 1 1.0713 0.89128 0 21866000 10797000 11070000 14159 886 5396 5528 22089;22090 22089 GSATNYITR 9 0 1 Unmodified _GSATNYITR_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.7514 2 491.751256 981.487959 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.539 1 32.539 32.039 33.039 0 0 0 0 4.9571E-06 1 13570 115.49 90.675 1 14160 886 5396 5528 22091 22091 GSAVHQLSEELR 12 0 1 Unmodified _GSAVHQLSEELR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.8997 3 442.565119 1324.67353 89578.16 -0.11586 -5.1275E-05 0.015458 6.8413E-06 -0.1004 -4.4433E-05 442.565137590496 445.901141937748 45.951 0.70166 45.951 45.635 46.337 0 173 63 6 0 0 0 0.00063563 1 24737 50.562 41.029 1 2.3737 2.6792 0 100610000 33473000 67136000 14161 397;1622 5397 5529 22092 22092 GSAVHQLSEELR 12 0 1 Unmodified _GSAVHQLSEELR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.3496 2 663.34404 1324.67353 74379.21 0.45116 0.00029928 -0.42477 -0.00028177 0.026393 1.7508E-05 663.343169330448 668.849660260147 45.948 0.52471 45.948 45.8 46.324 3.8147E-06 131 48 6 0 0 0 0.00022192 1 24828 99.283 75.193 1 2.3189 2.5398 0 53010000 24096000 28914000 14162 397;1622 5397 5529 22093 22093 GSAVHQLSEELR 12 0 1 Unmodified _GSAVHQLSEELR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3501 2 663.34404 1324.67353 74589.63 0.84095 0.00055784 -0.36729 -0.00024364 0.47366 0.0003142 663.343952288989 668.348018273863 43.596 0.56359 43.596 43.319 43.883 0 233 43 7 0 0 0 5.0085E-06 1 23548 118.28 87.715 1 2.0053 2.3136 0 71507000 22557000 48950000 14163 397;1622 5397 5529 22094 22094 GSAVHQLSEELR 12 0 1 Unmodified _GSAVHQLSEELR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 445.9012 3 442.565119 1324.67353 90096.48 0.34549 0.0001529 -1.0649 -0.00047128 -0.7194 -0.00031838 442.898362012048 445.901049534368 43.556 0.64334 43.556 43.299 43.943 0 313 50 10 0 0 0 7.3921E-05 1 23594 86.911 70.378 1 0.95312 1.0874 0 94158000 36328000 57829000 14164 397;1622 5397 5529 22095 22095 GSAVHQLSEELR 12 0 1 Unmodified _GSAVHQLSEELR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 445.9012 3 442.565119 1324.67353 89457.54 -0.16865 -7.4639E-05 0.23151 0.00010246 0.062854 2.7817E-05 442.565168188953 445.901311475023 52.496 0.66566 52.496 52.237 52.903 0 226 51 6 0 0 0 0.056679 1 25930 18.906 14.754 1 1.8916 1.5833 0 3928500 1442500 2486000 14165 397;1622 5397 5529 22096 22096 GSAVHQLSEELR 12 0 1 Unmodified _GSAVHQLSEELR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 445.9011 3 442.565119 1324.67353 91755.64 -0.078385 -3.469E-05 -0.070902 -3.1379E-05 -0.14929 -6.6069E-05 442.564979571623 445.901191283235 52.401 0.65242 52.401 52.154 52.806 0 198 53 6 0 0 0 0.046428 1 25295 21.06 21.06 1 2.0483 1.8109 0 3863200 992430 2870800 14166 397;1622 5397 5529 22097 22097 GSAVHQLSEELR 12 0 1 Unmodified _GSAVHQLSEELR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.3488 2 663.34404 1324.67353 76225.79 0.38276 0.0002539 -0.12627 -8.3762E-05 0.25648 0.00017014 663.343022534559 668.34835106555 52.402 0.639 52.402 52.182 52.821 0 197 52 6 0 0 0 0.015589 1 25318 55.806 55.806 1 2.2875 2.0226 0 3939700 772730 3167000 14167 397;1622 5397 5529 22098 22098 GSAYLEAGGTK 11 1 0 Unmodified _GSAYLEAGGTK_ 0 0 0 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.2643 2 527.264196 1052.51384 84500.6 0.41574 0.0002192 -0.36385 -0.00019184 0.051892 2.7361E-05 527.264227355144 531.27095568479 27.405 0.46099 27.405 27.185 27.646 1.9073E-06 76 26 6 0 0 0 0.0018003 1 12624 64.73 49.579 1 0.73173 0.76365 0 15010000 8335900 6674200 14168 1814 5398 5530 22099 22099 GSAYLEAGGTK 11 1 0 Unmodified _GSAYLEAGGTK_ 0 0 0 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.2643 2 527.264196 1052.51384 84534.85 0.5794 0.0003055 -0.18036 -9.51E-05 0.39903 0.0002104 527.263853608973 531.271684445336 26.978 0.4409 26.978 26.745 27.186 1.9073E-06 64 20 7 0 0 0 0.0012626 1 12362 68.847 53.185 1 1.2677 1.3103 0 24964000 12680000 12284000 14169 1814 5398 5530 22100 22100 GSCGIGGGIGGGSSR 15 0 1 Unmodified _GSCGIGGGIGGGSSR_ 0 0 0 CON__P02533;P02533;K7ENV3;CON__P08779;P08779 CON__P02533;CON__P08779 CON__P02533 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.7973 2 639.7964 1277.57825 NaN NaN NaN -0.75975 -0.00048609 NaN NaN NaN NaN 28.624 0.53095 28.624 28.429 28.96 0 0 0 0 0.017335 1 13498 44.616 31.989 1 NaN NaN 0 58194000 58194000 0 + 14170 1150;1159 5399 5531 22101 22101 GSCGIGGGIGGGSSR 15 0 1 Unmodified _GSCGIGGGIGGGSSR_ 0 0 0 CON__P02533;P02533;K7ENV3;CON__P08779;P08779 CON__P02533;CON__P08779 CON__P02533 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.7968 2 639.7964 1277.57825 NaN NaN NaN -0.69012 -0.00044153 NaN NaN NaN NaN 28.026 0.40823 28.026 27.795 28.203 -1.9073E-06 0 0 0 5.4573E-05 1 13177 81.918 69.292 1 NaN NaN 0 64452000 64452000 0 + 14171 1150;1159 5399 5531 22102 22102 GSCGIGGGIGGGSSR 15 0 1 Unmodified _GSCGIGGGIGGGSSR_ 0 0 0 CON__P02533;P02533;K7ENV3;CON__P08779;P08779 CON__P02533;CON__P08779 CON__P02533 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.7971 2 639.7964 1277.57825 NaN NaN NaN 0.34478 0.00022059 NaN NaN NaN NaN 32.248 0.57386 32.248 31.999 32.573 0 0 0 0 0.00048806 1 13784 71.806 71.806 1 NaN NaN 0 12041000 12041000 0 + 14172 1150;1159 5399 5531 22103 22103 GSDFDCELR 9 0 1 Unmodified _GSDFDCELR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.7352 2 549.729663 1097.44477 81050.86 0.96016 0.00052783 0.47306 0.00026005 1.4332 0.00078788 549.730033772478 554.734226910404 44.396 0.7793 44.396 44.061 44.84 0 265 69 6 0 0 0 0.0018009 2 23704 80.684 77.291 1 1.6477 1.7627 0 45268000 17148000 28120000 14173 102 5400 5532 22104;22105 22104 GSDFDCELR 9 0 1 Unmodified _GSDFDCELR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.7341 2 549.729663 1097.44477 80737.48 1.6142 0.00088739 0.82003 0.00045079 2.4343 0.0013382 549.730141251694 554.73461351086 43.712 0.67958 43.712 43.36 44.04 -3.8147E-06 211 53 6 0 0 0 0.010363 2 23668 59.35 51.782 1 1.5393 1.7738 0 72953000 25932000 47021000 14174 102 5400 5532 22106;22107 22106 GSDFDCELR 9 0 1 Unmodified _GSDFDCELR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.734 2 549.729663 1097.44477 80708.3 0.15404 8.4682E-05 0.47817 0.00026286 0.63221 0.00034754 549.729924292714 554.734042180631 51.494 0.6347 51.494 51.129 51.764 0 199 46 6 0 0 0 0.021253 2 25386 49.536 46.833 1 1.0573 0.90861 0 6477200 3147400 3329800 14175 102 5400 5532 22108;22109 22109 GSDFDCELR 9 0 1 Unmodified _GSDFDCELR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.7298 2 549.729663 1097.44477 80605.01 0.31556 0.00017347 0.13502 7.4225E-05 0.45058 0.0002477 549.729667229773 554.733859521912 51.866 0.60967 51.866 51.529 52.139 0 219 44 6 0 0 0 0.044488 1 24916 40.239 35.883 1 1.1441 0.96461 0 4764700 2103800 2660900 14176 102 5400 5532 22110 22110 GSDSEDGEFEIQAEDDAR 18 0 1 Unmodified _GSDSEDGEFEIQAEDDAR_ 0 0 0 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 990.9051 2 985.39832 1968.78209 62288.75 -0.0019751 -1.9463E-06 0.049956 4.9227E-05 0.047981 4.728E-05 985.398422354311 990.904260914886 64.921 0.53551 64.921 64.687 65.223 0 210 45 6 0 0 0 1.2748E-05 3 37216 77.912 77.122 1 1.3934 1.3934 0 16846000 7308000 9538300 14177 1933 5401 5533 22111;22112;22113 22111 GSDSEDGEFEIQAEDDAR 18 0 1 Unmodified _GSDSEDGEFEIQAEDDAR_ 0 0 0 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 990.902 2 985.39832 1968.78209 62368.05 0.27058 0.00026663 0.16334 0.00016096 0.43392 0.00042759 985.398706221174 990.402747496145 63.94 0.5266 63.94 63.698 64.225 0 200 49 6 0 0 0 1.0686E-05 2 37497 79.466 77.15 1 1.2364 1.2166 0 14431000 6860900 7570500 14178 1933 5401 5533 22114;22115 22114 GSDSEDGEFEIQAEDDAR 18 0 1 Unmodified _GSDSEDGEFEIQAEDDAR_ 0 0 0 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 985.3989 2 985.39832 1968.78209 NaN NaN NaN 1.0327 0.0010176 NaN NaN NaN NaN 74.947 0.39721 74.947 74.801 75.198 0 0 0 0 0.041062 1 39795 31.526 31.338 1 NaN NaN 0 1715200 1715200 0 14179 1933 5401 5533 22116 22116 GSDSEDGEFEIQAEDDAR 18 0 1 Unmodified _GSDSEDGEFEIQAEDDAR_ 0 0 0 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 985.3983 2 985.39832 1968.78209 NaN NaN NaN -0.16552 -0.0001631 NaN NaN NaN NaN 75.611 0.46731 75.611 75.337 75.804 0 0 0 0 0.040598 1 39387 31.675 31.318 1 NaN NaN 0 976130 976130 0 14180 1933 5401 5533 22117 22117 GSDVASAQLPNFR 13 0 1 Unmodified _GSDVASAQLPNFR_ 0 0 0 Q5T280;R4GNG4 Q5T280 Q5T280 C9orf114 Putative methyltransferase C9orf114 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3429 2 681.34404 1360.67353 75395.17 0.65731 0.00044786 -0.858 -0.00058459 -0.20068 -0.00013673 681.343301621514 686.347602155455 75.998 0.53534 75.998 75.752 76.288 0 139 43 4 0 0 0 0.00013828 2 44766 73.499 60.923 1 0.91109 0.93901 0 14070000 6278600 7791400 14181 1819 5402 5534 22118;22119 22119 GSDVASAQLPNFR 13 0 1 Unmodified _GSDVASAQLPNFR_ 0 0 0 Q5T280;R4GNG4 Q5T280 Q5T280 C9orf114 Putative methyltransferase C9orf114 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3422 2 681.34404 1360.67353 73515.13 0.38292 0.0002609 -0.73812 -0.00050291 -0.3552 -0.00024201 681.343752489352 686.347465135936 74.996 0.50036 74.996 74.764 75.264 0 149 43 5 0 0 0 0.00012105 2 45126 77.192 66.164 1 1.0227 1.0079 0 14674000 6353100 8320800 14182 1819 5402 5534 22120;22121 22120 GSDVASAQLPNFR 13 0 1 Unmodified _GSDVASAQLPNFR_ 0 0 0 Q5T280;R4GNG4 Q5T280 Q5T280 C9orf114 Putative methyltransferase C9orf114 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.3445 2 681.34404 1360.67353 74323.47 0.58252 0.0003969 -0.00096716 -6.5897E-07 0.58156 0.00039624 681.344205645925 686.348396309041 87.093 0.57181 87.093 86.864 87.436 0 132 32 6 0 0 0 0.0024393 2 47084 53.751 45.17 1 0.98078 0.83607 0 2923600 1455700 1467900 14183 1819 5402 5534 22122;22123 22123 GSEASSEAGVVTTR 14 0 1 Unmodified _GSEASSEAGVVTTR_ 0 0 0 A0A087WX60;Q86TC9;A5PKT7 A0A087WX60 A0A087WX60 MYPN Myopalladin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.8316 2 675.82842 1349.64229 NaN NaN NaN 0.18361 0.00012409 NaN NaN NaN NaN 27.355 0.29708 27.355 27.209 27.506 0 0 0 0 1.7652E-10 1 12578 117.09 100.25 1 NaN NaN 0 4203500 0 4203500 14184 429 5403 5535 22124 22124 GSEASSEAGVVTTR 14 0 1 Unmodified _GSEASSEAGVVTTR_ 0 0 0 A0A087WX60;Q86TC9;A5PKT7 A0A087WX60 A0A087WX60 MYPN Myopalladin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.8327 2 675.82842 1349.64229 NaN NaN NaN -0.46758 -0.00031601 NaN NaN NaN NaN 26.954 0.23758 26.954 26.822 27.059 0 0 0 0 0.00021847 1 12306 84.479 65.699 1 NaN NaN 0 5617600 0 5617600 14185 429 5403 5535 22125 22125 GSEASSEAGVVTTR 14 0 1 Unmodified _GSEASSEAGVVTTR_ 0 0 0 A0A087WX60;Q86TC9;A5PKT7 A0A087WX60 A0A087WX60 MYPN Myopalladin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.8268 2 675.82842 1349.64229 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.934 1 26.934 26.434 27.434 -1.9073E-06 0 0 0 0.0028148 1 12297 59.418 45.299 1 14186 429 5403 5535 22126 22126 GSEFMFEK 8 1 0 Oxidation (M) _GSEFM(ox)FEK_ GSEFM(1)FEK GSEFM(40.07)FEK 0 1 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.7224 2 495.715493 989.416433 88420.31 0.33453 0.00016583 0.15784 7.8243E-05 0.49237 0.00024408 495.71560378891 499.722621680482 46.216 0.69037 46.216 45.847 46.537 -3.8147E-06 129 54 4 0 0 0 0.029115 1 25522 40.067 37.083 1 1.773 1.7707 0 15121000 4354300 10767000 14187 907 5404 5536 22127 22127 732 GSEGKPSLTLPASAPGPEEALTTVTVAPAPR 31 1 1 Unmodified _GSEGKPSLTLPASAPGPEEALTTVTVAPAPR_ 0 0 1 P48634;B4DLY2 P48634 P48634 PRRC2A Protein PRRC2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1007.2066 3 1001.19954 3000.57678 61921.31 0.27684 0.00027717 -0.0076549 -7.6641E-06 0.26918 0.00026951 1001.86883713812 1007.20705173589 120.59 0.31506 120.59 120.4 120.72 0 45 14 6 0 0 0 0.037988 1 71590 14.053 14.053 1 3.9149 3.2412 0 5631700 906700 4725000 14188 1576 5405 5537 22128 22128 GSEHQAIVQHLEK 13 1 0 Unmodified _GSEHQAIVQHLEK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2633 3 492.591557 1474.75284 86412.32 0.32943 0.00016228 0.1303 6.4183E-05 0.45973 0.00022646 492.59158760227 495.262990599297 25.318 0.58165 25.318 25.113 25.695 0 77 29 6 0 0 0 0.00010826 1 10902 63.128 63.128 1 0.95241 1.0565 0 59137000 30175000 28962000 14189 1741 5406 5538 22129 22129 GSEHQAIVQHLEK 13 1 0 Unmodified _GSEHQAIVQHLEK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.3376 2 738.383697 1474.75284 72219.73 0.80993 0.00059804 -0.47018 -0.00034717 0.33975 0.00025086 738.383241813415 742.390502054811 25.325 0.11633 25.325 25.236 25.352 0 28 5 6 0 0 0 0.0011624 1 10925 77.644 67.691 1 1.0232 1.0864 0 15795000 8218800 7576300 14190 1741 5406 5538 22130 22130 GSEHQAIVQHLEK 13 1 0 Unmodified _GSEHQAIVQHLEK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.5907 3 492.591557 1474.75284 NaN NaN NaN -0.88547 -0.00043618 NaN NaN NaN NaN 23.859 0.51988 23.859 23.701 24.22 0 0 0 0 3.7589E-06 1 9656 82.109 82.109 1 NaN NaN 0 46308000 46308000 0 14191 1741 5406 5538 22131 22131 GSEHQAIVQHLEK 13 1 0 Unmodified _GSEHQAIVQHLEK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2632 3 492.591557 1474.75284 NaN NaN NaN 0.7217 0.0003555 NaN NaN NaN NaN 23.859 0.31346 23.859 23.673 23.987 0 0 0 0 0.020983 1 9680 37.654 22.968 1 NaN NaN 0 57092000 0 57092000 14192 1741 5406 5538 22132 22132 GSEHQAIVQHLEK 13 1 0 Unmodified _GSEHQAIVQHLEK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2632 3 492.591557 1474.75284 85139.23 0.20695 0.00010194 -0.29542 -0.00014552 -0.088475 -4.3582E-05 492.591558116855 495.2628873399 27.315 0.52325 27.315 27.121 27.644 0 123 23 7 0 0 0 0.0042466 1 10585 37.886 37.886 1 1.2605 1.01 0 8419100 3454500 4964600 14193 1741 5406 5538 22133 22133 GSEHQAIVQHLEK 13 1 0 Unmodified _GSEHQAIVQHLEK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.5907 3 492.591557 1474.75284 84168.55 -0.084248 -4.15E-05 -1.5942 -0.00078527 -1.6784 -0.00082677 492.590810343069 495.262093906636 27.031 0.77376 27.031 26.753 27.527 0 149 34 7 0 0 0 0.0027157 2 9889 38.399 32.8 1 1.3463 1.0959 0 6907900 2819600 4088300 14194 1741 5406 5538 22134;22135 22135 GSEIQSSSALYPVGR 15 0 1 Unmodified _GSEIQSSSALYPVGR_ 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.901 2 775.894094 1549.77364 69728.27 0.78164 0.00060647 -0.61646 -0.00047831 0.16517 0.00012816 775.894009160824 780.897218566725 68.155 0.45065 68.155 67.921 68.372 0 156 38 7 0 0 0 1.0033E-10 2 39498 122.7 111.53 1 0.86734 0.88609 0 18879000 10349000 8529900 14195 1680 5407 5539 22136;22137 22136 GSEIQSSSALYPVGR 15 0 1 Unmodified _GSEIQSSSALYPVGR_ 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.8925 2 775.894094 1549.77364 70907.45 0.43056 0.00033407 -0.30616 -0.00023755 0.1244 9.6523E-05 775.894155611121 780.897527420477 67.054 0.479 67.054 66.772 67.251 0 149 41 6 0 0 0 5.9351E-07 3 39627 100.55 100.55 1 0.87152 0.85813 0 13236000 6294600 6941900 14196 1680 5407 5539 22138;22139;22140 22139 GSEIQSSSALYPVGR 15 0 1 Unmodified _GSEIQSSSALYPVGR_ 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 781.3995 2 775.894094 1549.77364 69596.05 0.62608 0.00048577 -0.57168 -0.00044356 0.0544 4.2208E-05 775.893976435206 780.898371474468 78.126 0.59956 78.126 77.824 78.423 0 189 38 7 0 0 0 0.00060268 2 41798 53.967 53.967 1 2.0299 1.7424 0 6309900 2083200 4226600 14197 1680 5407 5539 22141;22142 22141 GSEIQSSSALYPVGR 15 0 1 Unmodified _GSEIQSSSALYPVGR_ 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.3965 2 775.894094 1549.77364 69381.25 0.66354 0.00051483 -0.31702 -0.00024597 0.34652 0.00026886 776.395435310591 780.898293395856 78.463 0.61295 78.463 78.199 78.812 0 180 40 6 0 0 0 0.00022216 2 41248 67.08 63.655 1 1.8946 1.6006 0 4726700 1608100 3118600 14198 1680 5407 5539 22143;22144 22144 GSELEITLTR 10 0 1 Unmodified _GSELEITLTR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8;Q9P1N9;Q5TCC6 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.8101 2 559.806228 1117.5979 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.686 1 89.686 89.186 90.186 0 0 0 0 0.049695 1 49619 44.392 34.754 1 14199 1561 5408 5540 22145 22145 GSELQLPFQACLK 13 1 0 Unmodified _GSELQLPFQACLK_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.8954 2 745.887226 1489.7599 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.63 1 109.63 109.13 110.13 7.6294E-06 0 0 0 2.3327E-10 1 70422 109.66 78.866 1 14200 1854 5409 5541 22146 22146 GSETGSETHESDLAPSDK 18 1 0 Unmodified _GSETGSETHESDLAPSDK_ 0 0 0 P48634;B4DLY2 P48634 P48634 PRRC2A Protein PRRC2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.9417 3 616.269425 1845.78644 76074.07 0.52097 0.00032106 0.00058167 3.5846E-07 0.52155 0.00032141 616.269459493916 618.941264892533 20.673 0.22195 20.673 20.569 20.791 0 27 6 6 0 0 0 1.0606E-05 2 6966 63.46 54.517 1 1.806 1.8198 0 7395000 3287000 4108000 14201 1576 5410 5542 22147;22148 22147 GSETGSETHESDLAPSDK 18 1 0 Unmodified _GSETGSETHESDLAPSDK_ 0 0 0 P48634;B4DLY2 P48634 P48634 PRRC2A Protein PRRC2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.9413 3 616.269425 1845.78644 80903.16 0.2204 0.00013583 0.3854 0.00023751 0.60581 0.00037334 616.26977660544 618.941151961181 23.04 0.27158 23.04 22.896 23.168 -1.9073E-06 36 10 5 0 0 0 0.012488 1 7666 22.435 20.657 1 2.7597 2.3142 0 1362400 440280 922160 14202 1576 5410 5542 22149 22149 GSEVTAPVASDSSYR 15 0 1 Unmodified _GSEVTAPVASDSSYR_ 0 0 0 A0A0A0MQS0;F8W9L8;A0A024R9G8;A0A0A8K9A6;A8MW92 A0A0A0MQS0 A0A0A0MQS0 PHF20L1;URLC1 PHD finger protein 20-like protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.3654 2 763.360084 1524.70562 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.273 1 44.273 43.773 44.773 -3.8147E-06 0 0 0 0.0070578 1 24163 51.092 36.425 1 14203 461 5411 5543 22150 22150 GSFAPGHGPR 10 0 1 Unmodified _GSFAPGHGPR_ 0 0 0 Q9NX00 Q9NX00 Q9NX00 TMEM160 Transmembrane protein 160 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 331.5027 3 328.166631 981.478063 106913.4 0.16053 5.2682E-05 -0.10681 -3.5052E-05 0.053721 1.763E-05 328.166486617778 331.502608859082 18.357 0.26678 18.357 18.24 18.507 0 32 11 5 0 0 0 0.039972 1 5323 26.043 22.342 1 0.95474 1.0105 0 3913800 2227900 1685900 14204 2076 5412 5544 22151 22151 GSFEGTSQNLPK 12 1 0 Unmodified _GSFEGTSQNLPK_ 0 0 0 A0A024RAL5;Q8N567 A0A024RAL5 A0A024RAL5 ZCCHC9 Zinc finger CCHC domain-containing protein 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.8127 2 632.812042 1263.60953 75355.9 0.57079 0.0003612 -1.3875 -0.000878 -0.81667 -0.0005168 632.81252001446 636.819129316827 40.77 0.58363 40.77 40.533 41.117 0 220 50 7 0 0 0 0.00018073 1 21381 74.841 62.314 1 0.97616 0.99333 0 27985000 11512000 16473000 14205 308 5413 5545 22152 22152 GSFEGTSQNLPK 12 1 0 Unmodified _GSFEGTSQNLPK_ 0 0 0 A0A024RAL5;Q8N567 A0A024RAL5 A0A024RAL5 ZCCHC9 Zinc finger CCHC domain-containing protein 9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.8193 2 632.812042 1263.60953 76608.77 0.29932 0.00018941 -0.0091632 -5.7986E-06 0.29016 0.00018362 632.812085465421 636.819273963277 47.315 0.62849 47.315 47.041 47.67 3.8147E-06 212 47 6 0 0 0 0.00076176 2 22936 66.19 59.599 1 1.4353 1.1141 0 3459000 1418800 2040200 14206 308 5413 5545 22153;22154 22154 GSFEGTSQNLPK 12 1 0 Unmodified _GSFEGTSQNLPK_ 0 0 0 A0A024RAL5;Q8N567 A0A024RAL5 A0A024RAL5 ZCCHC9 Zinc finger CCHC domain-containing protein 9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8193 2 632.812042 1263.60953 76654.79 0.28026 0.00017735 0.034186 2.1634E-05 0.31445 0.00019899 632.812009376511 636.819253570331 47.636 0.56335 47.636 47.294 47.858 0 168 41 6 0 0 0 0.00028004 1 22576 73.327 60.537 1 1.4575 1.1669 0 4165300 1647600 2517600 14207 308 5413 5545 22155 22155 GSFSDTGLGDGK 12 1 0 Unmodified _GSFSDTGLGDGK_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.7703 2 570.762017 1139.50948 79720.58 0.89755 0.00051229 0.024411 1.3933E-05 0.92196 0.00052622 570.76158611294 574.769575596087 38.297 0.98621 38.297 37.882 38.868 3.8147E-06 288 80 7 0 0 0 0.0014096 2 19490 61.213 53.992 1 0.9021 1.0144 0 70921000 37943000 32977000 14208 2128 5414 5546 22156;22157 22156 GSFSDTGLGDGK 12 1 0 Unmodified _GSFSDTGLGDGK_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.771 2 570.762017 1139.50948 80220.72 0.5198 0.00029668 0.02466 1.4075E-05 0.54446 0.00031075 570.761595287082 574.769439656162 37.421 0.89031 37.421 37.068 37.958 0 303 67 7 0 0 0 1.1073E-05 2 19327 107.55 96.747 1 0.87768 0.98485 0 114840000 62376000 52461000 14209 2128 5414 5546 22158;22159 22158 GSFSDTGLGDGK 12 1 0 Unmodified _GSFSDTGLGDGK_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.7708 2 570.762017 1139.50948 82147.66 0.47615 0.00027177 0.070907 4.0471E-05 0.54706 0.00031224 570.761779564199 574.769576441623 43.641 0.81591 43.641 43.282 44.098 0 267 55 8 0 0 0 0.009173 2 20509 47.302 44.45 1 1.2356 0.98987 0 8466900 4212000 4254800 14210 2128 5414 5546 22160;22161 22160 GSFSDTGLGDGK 12 1 0 Unmodified _GSFSDTGLGDGK_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.7621 2 570.762017 1139.50948 80670.05 0.40469 0.00023098 -0.08552 -4.8812E-05 0.31917 0.00018217 570.76184561435 574.769445770653 43.74 0.87741 43.74 43.382 44.259 0 248 54 7 0 0 0 0.0011731 1 20064 61.815 52.458 1 1.2581 1.0243 0 6873300 3271400 3601800 14211 2128 5414 5546 22162 22162 GSGAGVGTTLTPLPPPK 17 1 0 Unmodified _GSGAGVGTTLTPLPPPK_ 0 0 0 Q8NBZ0;J3KNE2;H3BNM4;Q8TET7 Q8NBZ0 Q8NBZ0 INO80E;FLJ00079 INO80 complex subunit E ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.4408 2 775.432855 1548.85116 NaN NaN NaN 0.013734 1.065E-05 NaN NaN NaN NaN 79.074 0.52006 79.074 78.884 79.404 0 0 0 0 7.4899E-05 1 46859 71.806 62.318 1 NaN NaN 0 10660000 0 10660000 14212 1921 5415 5547 22163 22163 GSGAGVGTTLTPLPPPK 17 1 0 Unmodified _GSGAGVGTTLTPLPPPK_ 0 0 0 Q8NBZ0;J3KNE2;H3BNM4;Q8TET7 Q8NBZ0 Q8NBZ0 INO80E;FLJ00079 INO80 complex subunit E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.4335 2 775.432855 1548.85116 70290.49 0.48945 0.00037954 -0.19764 -0.00015326 0.29181 0.00022628 775.43294355112 779.439766938313 78.094 0.54768 78.094 77.821 78.369 0 208 45 6 0 0 0 4.4997E-25 2 47277 140.91 140.91 1 0.77181 0.79766 0 24970000 13989000 10981000 14213 1921 5415 5547 22164;22165 22165 GSGAGVGTTLTPLPPPK 17 1 0 Unmodified _GSGAGVGTTLTPLPPPK_ 0 0 0 Q8NBZ0;J3KNE2;H3BNM4;Q8TET7 Q8NBZ0 Q8NBZ0 INO80E;FLJ00079 INO80 complex subunit E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.433 2 775.432855 1548.85116 69844.04 0.53019 0.00041113 0.14516 0.00011256 0.67536 0.00052369 775.432511269164 779.440404490351 90.31 0.63606 90.31 90.053 90.689 0 201 41 6 0 0 0 0.0019099 1 49246 37.525 37.525 1 1.1297 0.88557 0 3784200 1818600 1965500 14214 1921 5415 5547 22166 22166 GSGGLGGACGGAGFGSR 17 0 1 Unmodified _GSGGLGGACGGAGFGSR_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;A0A0S2Z427;CON__P04259;B4DKV4 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.822 2 712.820406 1423.62626 NaN NaN NaN 0.016765 1.1951E-05 NaN NaN NaN NaN 40.152 0.37936 40.152 39.978 40.357 0 0 0 0 2.8933E-09 1 20932 100.73 90.774 1 NaN NaN 0 90325000 90325000 0 + 14215 859;1154 5416 5548 22167 22167 GSGGLGGACGGAGFGSR 17 0 1 Unmodified _GSGGLGGACGGAGFGSR_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;A0A0S2Z427;CON__P04259;B4DKV4 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.8207 2 712.820406 1423.62626 NaN NaN NaN 0.36482 0.00026005 NaN NaN NaN NaN 39.059 0.44583 39.059 38.895 39.341 0 0 0 0 3.9482E-05 1 20668 75.96 75.96 1 NaN NaN 0 52928000 52928000 0 + 14216 859;1154 5416 5548 22168 22168 GSGGLGGACGGAGFGSR 17 0 1 Unmodified _GSGGLGGACGGAGFGSR_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;A0A0S2Z427;CON__P04259;B4DKV4 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.8212 2 712.820406 1423.62626 NaN NaN NaN 0.27933 0.00019911 NaN NaN NaN NaN 45.976 0.55428 45.976 45.781 46.335 0 0 0 0 0.0056201 1 22051 49.62 49.62 1 NaN NaN 0 10527000 10527000 0 + 14217 859;1154 5416 5548 22169 22169 GSGQGDSLYPVGYLDK 16 1 0 Unmodified _GSGQGDSLYPVGYLDK_ 0 0 0 S4R329;H0YK61;H0YNK0;H0YNK8;A0A0S2Z598;A0A024R9N3;Q5J8M3;H0YLP8 S4R329 S4R329 EMC4;TMEM85 ER membrane protein complex subunit 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.3979 2 828.399209 1654.78387 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.442 1 88.442 87.942 88.942 0 0 0 0 0.00081729 1 54548 60.628 51.56 1 14218 283 5417 5549 22170 22170 GSGSGQSPSSGQHGTGFGR 19 0 1 Unmodified _GSGSGQSPSSGQHGTGFGR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.3909 2 874.39077 1746.76699 NaN NaN NaN -0.054576 -4.7721E-05 NaN NaN NaN NaN 17.126 0.20475 17.126 17.021 17.225 0 0 0 0 0.00091902 1 4311 53.377 46.524 1 NaN NaN 0 4390500 4390500 0 + 14219 1179 5418 5550 22171 22171 GSGSGQSPSSGQHGTGFGR 19 0 1 Unmodified _GSGSGQSPSSGQHGTGFGR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.3894 2 874.39077 1746.76699 NaN NaN NaN -0.51624 -0.00045139 NaN NaN NaN NaN 17.035 0.23003 17.035 16.937 17.167 0 0 0 0 0.0031213 1 4061 45.79 39.406 1 NaN NaN 0 2019200 2019200 0 + 14220 1179 5418 5550 22172 22172 GSGSGQSPSSGQHGTGFGR 19 0 1 Unmodified _GSGSGQSPSSGQHGTGFGR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.263 3 583.262939 1746.76699 NaN NaN NaN 0.36212 0.00021121 NaN NaN NaN NaN 18.112 0.26701 18.112 17.988 18.255 0 0 0 0 0.0024991 1 4248 39.387 28.753 1 NaN NaN 0 1180700 1180700 0 + 14221 1179 5418 5550 22173 22173 GSGSQSSVPSVDQFTGVGIR 20 0 1 Unmodified _GSGSQSSVPSVDQFTGVGIR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 982.9861 2 982.987243 1963.95993 61946.7 0.36104 0.0003549 -0.7435 -0.00073085 -0.38246 -0.00037595 983.488184624341 987.991970557316 95.409 0.77567 95.409 95.131 95.907 -7.6294E-06 308 60 9 0 0 0 2.4283E-06 3 57918 67.115 67.115 1 0.78447 0.81114 0 23492000 11082000 12410000 14222 803 5419 5551 22174;22175;22176 22175 GSGSQSSVPSVDQFTGVGIR 20 0 1 Unmodified _GSGSQSSVPSVDQFTGVGIR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 988.4952 2 982.987243 1963.95993 62236.4 0.31912 0.00031369 -0.81797 -0.00080406 -0.49885 -0.00049036 983.487960107949 988.493060183499 94.701 0.73003 94.701 94.47 95.2 0 307 61 8 0 0 0 3.0905E-05 3 58748 48.14 48.14 1 0.78895 0.86141 0 30009000 15792000 14216000 14223 803 5419 5551 22177;22178;22179 22178 GSGSQSSVPSVDQFTGVGIR 20 0 1 Unmodified _GSGSQSSVPSVDQFTGVGIR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 987.9931 2 982.987243 1963.95993 61801.04 0.3768 0.00037039 0.16102 0.00015828 0.53782 0.00052867 983.487625318136 987.992527948679 108.81 0.52841 108.81 108.54 109.07 0 155 25 9 0 0 0 2.4255E-06 1 62503 67.136 67.136 1 1.1098 0.92413 0 10694000 5093400 5601100 14224 803 5419 5551 22180 22180 GSGSQSSVPSVDQFTGVGIR 20 0 1 Unmodified _GSGSQSSVPSVDQFTGVGIR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 987.9933 2 982.987243 1963.95993 61696.38 0.24241 0.00023829 0.077239 7.5925E-05 0.31965 0.00031421 982.986776948829 987.992757245724 108.72 0.56717 108.72 108.47 109.03 7.6294E-06 177 28 8 0 0 0 0.0070703 2 61497 25.322 25.322 1 0.98978 0.81402 0 13998000 6940000 7057600 14225 803 5419 5551 22181;22182 22181 GSGTAEVELK 10 1 0 Unmodified _GSGTAEVELK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;H3BTN5;B4DRT3;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.7657 2 495.758746 989.50294 NaN NaN NaN 0.46857 0.0002323 NaN NaN NaN NaN 30.256 0.35961 30.256 30.079 30.438 1.9073E-06 0 0 0 1.8219E-11 1 14726 125.82 101.66 1 NaN NaN 0 39290000 0 39290000 14226 1481 5420 5552 22183 22183 GSGTAEVELK 10 1 0 Unmodified _GSGTAEVELK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;H3BTN5;B4DRT3;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.7664 2 495.758746 989.50294 84918.47 0.8272 0.00041009 0.17471 8.6615E-05 1.0019 0.00049671 495.758555474553 499.76589393089 29.732 0.46574 29.732 29.479 29.945 0 98 33 6 0 0 0 1.6945E-09 2 14381 130.75 102.57 1 3.4219 3.8594 0 62595000 14107000 48488000 14227 1481 5420 5552 22184;22185 22185 GSGTAEVELK 10 1 0 Unmodified _GSGTAEVELK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;H3BTN5;B4DRT3;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.7661 2 495.758746 989.50294 98886.16 0.36927 0.00018307 0.40135 0.00019897 0.77062 0.00038204 495.758625544246 499.765788043406 34.088 0.27306 34.088 33.958 34.232 0 66 26 4 0 0 0 0.0078188 2 15017 56.916 50.18 1 2.5469 2.088 0 2433000 644920 1788100 14228 1481 5420 5552 22186;22187 22186 GSGVTTYSVHPGTVQSELVR 20 0 1 Unmodified _GSGVTTYSVHPGTVQSELVR_ 0 0 0 H0YIZ8;G3V2G6;B3KQ19;A0A0S2Z583;Q8TC12 H0YIZ8 H0YIZ8 RDH11 Retinol dehydrogenase 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.3598 3 692.023637 2073.04908 73801.82 0.52411 0.0003627 -0.55408 -0.00038344 -0.029971 -2.0741E-05 692.022770607345 695.694041653969 69.593 0.67641 69.593 69.261 69.937 0 216 56 8 0 0 0 0.0004118 3 41352 35.015 35.015 1 1.053 1.0972 0 22301000 9046400 13254000 14229 577 5421 5553 22188;22189;22190 22188 GSIFVVFDSIESAK 14 1 0 Unmodified _GSIFVVFDSIESAK_ 0 0 0 B5BUB5;P05455;Q14730;E9PGX9;E7ERC4 B5BUB5 B5BUB5 SSB Lupus La protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.0369 2 749.893032 1497.77151 73725.32 0.77985 0.0005848 -0.14097 -0.00010571 0.63887 0.00047909 749.892954616695 753.900146985812 122.97 0.48516 122.97 122.78 123.26 0 90 37 4 0 0 0 0.051827 1 79725 43.604 36.716 1 1.2049 1.2112 0 5222000 2286500 2935500 14230 1077 5422 5554 22191 22191 GSIIISPCVVCR 12 0 1 Unmodified _GSIIISPCVVCR_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.8619 2 680.857415 1359.70028 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.973 1 87.973 87.473 88.473 0 0 0 0 0.004961 1 53046 64.297 22.296 1 14231 1786 5423 5555 22192 22192 GSIIISPCVVCR 12 0 1 Unmodified _GSIIISPCVVCR_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.8568 2 680.857415 1359.70028 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.161 1 87.161 86.661 87.661 0 0 0 0 0.035364 1 53708 44.309 17.636 1 14232 1786 5423 5555 22193 22193 GSIIISPCVVCR 12 0 1 Unmodified _GSIIISPCVVCR_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.8627 2 680.857415 1359.70028 72734.2 0.4398 0.00029944 0.65181 0.00044379 1.0916 0.00074323 680.857455434073 685.862877715673 101.06 0.78796 101.06 100.78 101.57 7.6294E-06 239 52 7 0 0 0 0.013423 2 57250 44.309 44.309 1 0.85167 0.72317 0 5203500 2347800 2855700 14233 1786 5423 5555 22194;22195 22195 GSIIISPCVVCR 12 0 1 Unmodified _GSIIISPCVVCR_ 0 0 0 Q59E88;Q53G26;Q96EY1;B3KM81 Q59E88 Q59E88 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.858 2 680.857415 1359.70028 74188.8 0.51347 0.0003496 0.41643 0.00028353 0.9299 0.00063313 680.857300101897 685.862726611133 100.9 0.92014 100.9 100.56 101.48 -7.6294E-06 227 63 7 0 0 0 0.012248 2 56184 45.137 19.751 1 0.96983 0.84661 0 4234500 2514500 1720000 14234 1786 5423 5555 22196;22197 22196 GSISSTSEVHSPPNVGLR 18 0 1 Unmodified _GSISSTSEVHSPPNVGLR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.6461 3 608.64639 1822.91734 77076.94 0.63847 0.0003886 -0.97963 -0.00059625 -0.34116 -0.00020765 608.980581413379 611.982322072151 52.634 0.6167 52.634 52.166 52.783 0 177 46 8 0 0 0 0.00030283 1 30014 38.417 38.417 1 0.86873 0.94086 0 27418000 14795000 12623000 14235 1942 5424 5556 22198 22198 GSISSTSEVHSPPNVGLR 18 0 1 Unmodified _GSISSTSEVHSPPNVGLR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.6469 3 608.64639 1822.91734 81179.27 0.24379 0.00014838 0.028371 1.7268E-05 0.27216 0.00016565 608.980808967116 611.982480382869 63.695 0.34644 63.695 63.502 63.848 -3.8147E-06 88 33 4 0 0 0 0.05216 1 32085 12.749 12.749 1 0.40559 0.36673 0 2202500 1249900 952610 14236 1942 5424 5556 22199 22199 GSISVFEVDGK 11 1 0 Unmodified _GSISVFEVDGK_ 0 0 0 O95251;E7EUP3;B7Z4D9;B3KVJ2;B4DJ40 O95251 O95251 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.2932 2 569.292953 1136.57135 84946.27 0.50589 0.000288 -0.069446 -3.9535E-05 0.43645 0.00024847 569.292825746615 573.300232894311 77.065 0.70277 77.065 76.683 77.386 0 150 57 4 0 0 0 0.026417 1 46595 40.727 31.311 1 0.8133 0.82585 0 12788000 7842900 4945000 14237 1422 5425 5557 22200 22200 GSISVFEVDGKK 12 2 0 Unmodified _GSISVFEVDGKK_ 0 0 1 O95251;E7EUP3;B7Z4D9;B3KVJ2;B4DJ40 O95251 O95251 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3417 2 633.340435 1264.66632 NaN NaN NaN 0.28338 0.00017948 NaN NaN NaN NaN 54.97 0.60548 54.97 54.798 55.403 -3.8147E-06 0 0 0 0.0082262 1 31431 57.348 25.13 1 NaN NaN 0 7439100 7439100 0 14238 1422 5426 5558 22201 22201 GSLDESSLGFGYPK 14 1 0 Unmodified _GSLDESSLGFGYPK_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;Q2KJU6;Q2KJU5;Q2KJU3 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.8576 2 728.851364 1455.68817 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.52 1 100.52 100.02 101.02 0 0 0 0 0.0050162 1 56885 55.718 44.793 1 14239 11 5427 5559 22202 22202 GSLDYRPLTTADPIDEHR 18 0 2 Unmodified _GSLDYRPLTTADPIDEHR_ 0 0 1 B0AZS5;O00139;B4DM85;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.6806 3 686.007987 2055.00213 74319.86 0.64745 0.00044415 0.3391 0.00023263 0.98655 0.00067678 686.00769115323 693.014819053932 69.226 0.41063 69.226 69.055 69.466 0 115 34 6 0 0 0 0.039623 1 41261 19.036 19.036 1 1.0111 1.055 0 13358000 6472500 6885500 14240 804 5428 5560 22203 22203 GSLELCDFVTASSFCR 16 0 1 Unmodified _GSLELCDFVTASSFCR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 924.9157 2 924.916386 1847.81822 63315.84 0.95829 0.00088634 -0.41756 -0.00038621 0.54073 0.00050013 924.916094556601 929.920511581494 114.98 0.67287 114.98 114.61 115.29 7.6294E-06 188 43 8 0 0 0 1.9505E-08 2 73069 101.6 96.102 1 0.68925 0.69168 0 17158000 9751100 7407400 14241 2073 5429 5561 22204;22205 22205 GSLELCDFVTASSFCR 16 0 1 Unmodified _GSLELCDFVTASSFCR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.9196 2 924.916386 1847.81822 63454.35 0.66704 0.00061696 -0.53919 -0.0004987 0.12785 0.00011825 924.915722921228 929.920683730112 114.53 0.62083 114.53 114.23 114.86 7.6294E-06 184 39 8 0 0 0 1.3219E-08 1 74420 105.17 105.17 1 0.77314 0.78372 0 20190000 11110000 9080500 14242 2073 5429 5561 22206 22206 GSLELCDFVTASSFCR 16 0 1 Unmodified _GSLELCDFVTASSFCR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 929.9209 2 924.916386 1847.81822 NaN NaN NaN 1.2724 0.0011769 NaN NaN NaN NaN 126.52 0.72247 126.52 126.18 126.9 7.6294E-06 0 0 0 0.00021237 1 76006 71.241 56.21 1 NaN NaN 0 2870700 0 2870700 14243 2073 5429 5561 22207 22207 GSLELCDFVTASSFCR 16 0 1 Unmodified _GSLELCDFVTASSFCR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 929.9221 2 924.916386 1847.81822 62573.11 0.51119 0.00047281 0.21888 0.00020245 0.73007 0.00067526 924.916045999333 929.921552136205 126.27 0.62255 126.27 126.02 126.64 0 179 26 10 0 0 0 0.0010435 2 74976 46.88 46.88 1 1.2149 1.0009 0 8389800 4047000 4342800 14244 2073 5429 5561 22208;22209 22208 GSLESPATDVFGSTEEGEK 19 1 0 Unmodified _GSLESPATDVFGSTEEGEK_ 0 0 0 A0A0S2Z489;O00232 A0A0S2Z489 A0A0S2Z489 PSMD12 26S proteasome non-ATPase regulatory subunit 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 974.9504 2 970.441999 1938.86945 61856.23 0.49443 0.00047982 1.0998 0.0010673 1.5943 0.0015471 970.44449014163 974.449484645839 82.884 0.64703 82.884 82.599 83.246 0 237 54 7 0 0 0 1.7861E-22 1 49486 128.76 128.76 1 2.0004 2.1424 0 32469000 11234000 21235000 14245 558 5430 5562 22210 22210 GSLESPATDVFGSTEEGEK 19 1 0 Unmodified _GSLESPATDVFGSTEEGEK_ 0 0 0 A0A0S2Z489;O00232 A0A0S2Z489 A0A0S2Z489 PSMD12 26S proteasome non-ATPase regulatory subunit 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 974.4493 2 970.441999 1938.86945 61068.18 0.26731 0.00025941 0.56638 0.00054963 0.83368 0.00080904 970.443221771921 974.449852073062 82.068 0.6692 82.068 81.704 82.374 0 275 60 7 0 0 0 3.5907E-05 2 50021 52.966 52.966 1 2.1247 2.2669 0 36638000 12392000 24246000 14246 558 5430 5562 22211;22212 22211 GSLEVLNLK 9 1 0 Unmodified _GSLEVLNLK_ 0 0 0 A0A0S2Z5I7;A0A087X020;Q9Y3A5 A0A0S2Z5I7 A0A0S2Z5I7 SBDS Ribosome maturation protein SBDS ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.797 2 486.78985 971.565146 NaN NaN NaN 0.086294 4.2007E-05 NaN NaN NaN NaN 83.375 0.5141 83.375 83.079 83.593 0 0 0 0 0.038893 1 49864 50.607 33.221 1 NaN NaN 0 4832900 0 4832900 14247 442 5431 5563 22213 22213 GSLGGGFSSGGFSGGSFSR 19 0 1 Unmodified _GSLGGGFSSGGFSGGSFSR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 854.3896 2 854.389707 1706.76486 NaN NaN NaN -0.21274 -0.00018177 NaN NaN NaN NaN 81.726 1.1599 81.726 81.248 82.408 0 0 0 0 1.6602E-06 2 50247 76.358 71.259 1 NaN NaN 0 290140000 290140000 0 + 14248 1161 5432 5564 22214;22215 22215 GSLGGGFSSGGFSGGSFSR 19 0 1 Unmodified _GSLGGGFSSGGFSGGSFSR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 854.3902 2 854.389707 1706.76486 NaN NaN NaN -0.32709 -0.00027946 NaN NaN NaN NaN 94.748 1.9203 94.748 94.104 96.025 0 0 0 0 3.7026E-06 1 52886 71.344 64.456 1 NaN NaN 0 115210000 115210000 0 + 14249 1161 5432 5564 22216 22216 GSLGGGFSSGGFSGGSFSR 19 0 1 Unmodified _GSLGGGFSSGGFSGGSFSR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.8924 2 854.389707 1706.76486 NaN NaN NaN -0.37557 -0.00032088 NaN NaN NaN NaN 94.745 1.8457 94.745 94.158 96.004 0 0 0 0 1.3079E-06 2 52049 77.222 70.533 1 NaN NaN 0 96866000 96866000 0 + 14250 1161 5432 5564 22217;22218 22217 GSLGQGTAPVLPGK 14 1 0 Unmodified _GSLGQGTAPVLPGK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.3626 2 641.361702 1280.70885 73978.95 0.50278 0.00032246 0.047775 3.0641E-05 0.55055 0.0003531 641.36218957478 645.368517573957 59.9 0.81806 59.9 59.476 60.295 0 264 68 7 0 0 0 1.8955E-06 2 34133 107.09 94.302 1 0.71217 0.80439 0 107440000 61737000 45703000 14251 1712;1225 5433 5565 22219;22220 22219 GSLGQGTAPVLPGK 14 1 0 Unmodified _GSLGQGTAPVLPGK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3633 2 641.361702 1280.70885 74658.8 0.99642 0.00063906 -0.65981 -0.00042318 0.33661 0.00021589 641.361991553517 645.368090176224 58.738 0.89025 58.738 58.351 59.241 -3.8147E-06 313 82 7 0 0 0 7.0893E-05 2 34266 89.9 89.9 1 0.70696 0.79037 0 87000000 48115000 38885000 14252 1712;1225 5433 5565 22221;22222 22222 GSLGQGTAPVLPGK 14 1 0 Unmodified _GSLGQGTAPVLPGK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.3626 2 641.361702 1280.70885 76161.51 0.43181 0.00027695 -0.17604 -0.00011291 0.25577 0.00016404 641.361839730579 645.368712585406 69.419 0.48051 69.419 69.235 69.715 7.6294E-06 156 36 6 0 0 0 0.0092506 2 36375 37.327 37.327 1 2.0328 1.5926 0 16620000 4765800 11855000 14253 1712;1225 5433 5565 22223;22224 22223 GSLGQGTAPVLPGK 14 1 0 Unmodified _GSLGQGTAPVLPGK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.3621 2 641.361702 1280.70885 77521.69 0.4868 0.00031222 -0.16819 -0.00010787 0.31862 0.00020435 641.361783441954 645.368840594298 69.942 0.49018 69.942 69.718 70.208 -7.6294E-06 159 40 6 0 0 0 0.00081597 1 35930 58.132 58.132 1 1.9653 1.5992 0 12980000 4564500 8415600 14254 1712;1225 5433 5565 22225 22225 GSLGSQGAKDEPEEELQK 18 2 0 Unmodified _GSLGSQGAKDEPEEELQK_ 0 0 1 E7ETY2;B4DRA2;Q9UFD4;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 951.9605 2 951.457984 1900.90141 62999.08 0.70488 0.00067067 0.55607 0.00052908 1.261 0.0011997 951.959746727709 959.472882570812 32.385 0.2908 32.385 32.221 32.512 0 75 25 6 0 0 0 0.00015709 1 16008 79.875 63.985 1 0.73572 0.86506 0 13998000 7921400 6076700 14255 1712;1225 5434 5566 22226 22226 GSLGSQGAKDEPEEELQK 18 2 0 Unmodified _GSLGSQGAKDEPEEELQK_ 0 0 1 E7ETY2;B4DRA2;Q9UFD4;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.6412 3 634.641081 1900.90141 75159.88 0.92427 0.00058658 -0.035894 -2.278E-05 0.88838 0.0005638 634.640943424856 639.983879193051 31.55 0.41198 31.55 31.366 31.778 0 205 37 8 0 0 0 5.7721E-12 2 15589 103.17 97.139 1 0.52259 0.60516 0 52015000 33950000 18064000 14256 1712;1225 5434 5566 22227;22228 22228 GSLGSQGAKDEPEEELQK 18 2 0 Unmodified _GSLGSQGAKDEPEEELQK_ 0 0 1 E7ETY2;B4DRA2;Q9UFD4;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.4705 2 951.457984 1900.90141 63232.88 0.87216 0.00082982 0.33933 0.00032286 1.2115 0.0011527 951.959828841378 959.472520284252 31.579 0.29887 31.579 31.397 31.696 0 108 26 9 0 0 0 0.00015523 1 15600 67.115 60.883 1 0.5062 0.57863 0 15790000 10513000 5277200 14257 1712;1225 5434 5566 22229 22229 GSLGSQGAKDEPEEELQK 18 2 0 Unmodified _GSLGSQGAKDEPEEELQK_ 0 0 1 E7ETY2;B4DRA2;Q9UFD4;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.6414 3 634.641081 1900.90141 75393.44 0.50711 0.00032183 -0.19719 -0.00012514 0.30992 0.00019669 634.641008891423 639.983734314706 37.824 0.65812 37.824 37.536 38.194 0 393 54 10 0 0 0 5.2706E-06 2 17001 78.917 78.917 1 0.51398 0.43697 0 35018000 23418000 11600000 14258 1712;1225 5434 5566 22230;22231 22231 GSLGSQGAKDEPEEELQK 18 2 0 Unmodified _GSLGSQGAKDEPEEELQK_ 0 0 1 E7ETY2;B4DRA2;Q9UFD4;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.9843 3 634.641081 1900.90141 75219.85 0.38183 0.00024232 0.013094 8.3098E-06 0.39492 0.00025063 634.641147149552 639.983865543613 38.007 0.66628 38.007 37.719 38.385 0 364 52 10 0 0 0 1.296E-39 3 16669 120.9 120.9 1 0.53058 0.45159 0 37887000 24303000 13585000 14259 1712;1225 5434 5566 22232;22233;22234 22233 GSLLDFLK 8 1 0 Unmodified _GSLLDFLK_ 0 0 0 Q9H7V3;B3KPS6;B2RA70;J3QRU1;P12931;P06241;P07947;B4DQ79;A8K4G3;A8K379;H0Y3C5;J3KPD6;Q6NUK7;P07948;P08631 Q9H7V3 Q9H7V3 YES1;SRC;FYN;HCK;LYN Non-specific protein-tyrosine kinase;Proto-oncogene tyrosine-protein kinase Src;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Yes;Tyrosine-protein kinase Lyn;Tyrosine-protein kinase HCK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.761 2 446.760561 891.506569 91862.95 0.19032 8.503E-05 -0.054061 -2.4153E-05 0.13626 6.0877E-05 446.760456511207 450.767548177538 117.8 0.72858 117.8 117.41 118.14 7.6294E-06 142 45 5 0 0 0 0.041092 1 75349 46.994 25.247 1 1.7308 1.7211 0 8046800 2985300 5061500 14260 870 5435 5567 22235 22235 GSLQILDQLLLPK 13 1 0 Unmodified _GSLQILDQLLLPK_ 0 0 0 Q9BV20 Q9BV20 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.4448 2 719.437409 1436.86027 NaN NaN NaN -0.15712 -0.00011304 NaN NaN NaN NaN 130.59 0.53575 130.59 130.4 130.94 0 0 0 0 0.00099314 1 85126 78.342 71.751 1 NaN NaN 0 4299800 0 4299800 14261 2006 5436 5568 22236 22236 GSLQILDQLLLPK 13 1 0 Unmodified _GSLQILDQLLLPK_ 0 0 0 Q9BV20 Q9BV20 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.445 2 719.437409 1436.86027 NaN NaN NaN -0.17129 -0.00012323 NaN NaN NaN NaN 130.11 0.51535 130.11 129.95 130.47 -1.5259E-05 0 0 0 0.00063484 1 86903 80.706 61.391 1 NaN NaN 0 2939900 0 2939900 14262 2006 5436 5568 22237 22237 GSLQILDQLLLPK 13 1 0 Unmodified _GSLQILDQLLLPK_ 0 0 0 Q9BV20 Q9BV20 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.4382 2 719.437409 1436.86027 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.13 1 130.13 129.63 130.63 0 0 0 0 0.013466 1 86970 51.927 44.281 1 14263 2006 5436 5568 22238 22238 GSLVDYLR 8 0 1 Unmodified _GSLVDYLR_ 0 0 0 B4DMZ0;Q53EL3;B5BU52;B2R6Q4;A8K3B6;P41240;B4DP99 B4DMZ0 B4DMZ0 CSK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase CSK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7567 2 461.753267 921.491981 95352.52 0.20645 9.5328E-05 -0.16892 -7.8001E-05 0.037525 1.7327E-05 461.752891967244 466.757304140017 84.378 0.40875 84.378 84.16 84.569 0 74 32 4 0 0 0 0.027047 1 51798 54.157 38.525 1 3.0117 3.0172 0 6813300 1648500 5164800 14264 720 5437 5569 22239 22239 GSNEEDTDTPLFIGK 15 1 0 Unmodified _GSNEEDTDTPLFIGK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.8892 2 811.880849 1621.74715 68602.24 0.72183 0.00058604 0.13429 0.00010903 0.85612 0.00069506 811.88093709555 815.887955371756 79.95 0.58453 79.95 79.635 80.22 0 206 49 6 0 0 0 0.00019836 3 47334 87.001 87.001 1 1.1317 1.137 0 18599000 8118600 10481000 14265 684 5438 5570 22240;22241;22242 22240 GSNEEDTDTPLFIGK 15 1 0 Unmodified _GSNEEDTDTPLFIGK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.8887 2 811.880849 1621.74715 67820.86 0.78173 0.00063468 0.26505 0.00021519 1.0468 0.00084987 811.881028978155 815.88801512199 78.943 0.55653 78.943 78.653 79.209 0 231 47 6 0 0 0 0.00016251 2 47798 93.011 93.011 1 1.066 1.1229 0 23810000 10648000 13162000 14266 684 5438 5570 22243;22244 22243 GSNNVALGYDEGSIIVK 17 1 0 Unmodified _GSNNVALGYDEGSIIVK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.4528 2 868.446691 1734.87883 NaN NaN NaN -0.25038 -0.00021744 NaN NaN NaN NaN 89.343 0.31091 89.343 89.187 89.498 0 0 0 0 0.0063166 1 53906 48.585 33.045 1 NaN NaN 0 8099500 0 8099500 14267 1545 5439 5571 22245 22245 GSNNVALGYDEGSIIVK 17 1 0 Unmodified _GSNNVALGYDEGSIIVK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.4524 2 868.446691 1734.87883 67185.33 0.42773 0.00037146 0.049171 4.2702E-05 0.4769 0.00041416 868.447554083926 872.453412213804 88.421 0.37424 88.421 88.322 88.697 -7.6294E-06 68 33 4 0 0 0 1.0862E-05 2 54526 85.536 77.231 1 1.7866 1.872 0 24131000 8869900 15261000 14268 1545 5439 5571 22246;22247 22246 GSPETNHLIR 10 0 1 Unmodified _GSPETNHLIR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 378.5356 3 375.2 1122.57817 96701.7 0.096561 3.623E-05 -0.9851 -0.00036961 -0.88854 -0.00033338 375.199839192364 378.535388468105 23.715 0.45761 23.715 23.595 24.053 -1.9073E-06 48 17 6 0 0 0 0.0018792 1 9557 70.056 49.753 1 0.67607 0.67775 0 18019000 10572000 7446700 14269 1233 5440 5572 22248 22248 GSPETNHLIR 10 0 1 Unmodified _GSPETNHLIR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.2965 2 562.296362 1122.57817 80487.92 0.42515 0.00023906 -2.0774 -0.0011681 -1.6523 -0.00092908 562.296545520982 567.299400182252 26.351 0.45544 26.351 26.139 26.595 1.9073E-06 74 19 7 0 0 0 0.038692 1 9918 39.305 25.535 1 2.0481 1.7111 0 3349100 1053400 2295700 14270 1233 5440 5572 22249 22249 GSPETNHLIR 10 0 1 Unmodified _GSPETNHLIR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.2993 2 562.296362 1122.57817 79519.66 0.41411 0.00023285 -1.9019 -0.0010695 -1.4878 -0.0008366 562.296280346574 567.299260103788 26.254 0.52209 26.254 25.979 26.502 0 87 22 7 0 0 0 0.009241 2 9346 54.982 38.844 1 1.6529 1.4236 0 2763000 1109200 1653800 14271 1233 5440 5572 22250;22251 22250 GSPETNHLIR 10 0 1 Unmodified _GSPETNHLIR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 378.5359 3 375.2 1122.57817 98253.01 -0.063888 -2.3971E-05 -0.61186 -0.00022957 -0.67575 -0.00025354 375.199918520818 378.535826742452 26.247 0.37751 26.247 26.102 26.48 0 66 16 6 0 0 0 0.029968 1 9347 28.088 23.09 1 1.3093 1.1403 0 2613800 1257100 1356600 14272 1233 5440 5572 22252 22252 GSPGVVHLVAFHPDPTR 17 0 1 Unmodified _GSPGVVHLVAFHPDPTR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.3191 3 595.984677 1784.9322 78918.23 0.67274 0.00040095 0.13739 8.1882E-05 0.81013 0.00048283 596.319266949188 599.320819091817 75.069 1.8295 75.069 74.301 76.131 0 525 151 7 0 0 0 0.0022945 1 44260 33.405 33.405 1 0.68112 0.69676 0 34700000 17821000 16879000 14273 1698;436 5441 5573 22253 22253 GSPGVVHLVAFHPDPTR 17 0 1 Unmodified _GSPGVVHLVAFHPDPTR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.6556 3 595.984677 1784.9322 78801.95 0.46409 0.00027659 0.11046 6.5834E-05 0.57455 0.00034243 596.319318818722 599.320612837343 82.428 0.95763 82.428 82.095 83.053 0 360 56 9 0 0 0 0.0028348 1 43871 31.462 31.462 1 1.081 0.94299 0 25653000 12334000 13319000 14274 1698;436 5441 5573 22254 22254 GSPLGEVVEQGITR 14 0 1 Unmodified _GSPLGEVVEQGITR_ 0 0 0 P51398;V9GYJ9;V9GYL9;E2JL21 P51398 P51398 DAP3;MRPS29 28S ribosomal protein S29, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.3901 2 721.385905 1440.75726 74589.77 0.59811 0.00043147 0.034938 2.5204E-05 0.63305 0.00045667 721.385867312748 726.389808778619 88.31 0.6176 88.31 88.093 88.71 0 96 46 4 0 0 0 6.6215E-05 1 53191 90.614 90.614 1 1.6163 1.6344 0 17860000 6822300 11038000 14275 1594 5442 5574 22255 22255 GSPLLGPVVPGPSPIPSVTEK 21 1 0 Unmodified _GSPLLGPVVPGPSPIPSVTEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1015.0759 2 1014.57242 2027.13029 62118.11 0.37024 0.00037564 -0.0056317 -5.7138E-06 0.36461 0.00036993 1015.07370825135 1019.08080459633 116.2 0.45184 116.2 115.95 116.4 7.6294E-06 130 27 8 0 0 0 1.9018E-15 3 74111 105.19 105.19 1 1.0917 1.101 0 18432000 9377600 9054800 14276 1581 5443 5575 22256;22257;22258 22257 GSPLLGPVVPGPSPIPSVTEK 21 1 0 Unmodified _GSPLLGPVVPGPSPIPSVTEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1015.0749 2 1014.57242 2027.13029 62522.87 0.53043 0.00053816 -0.17602 -0.00017858 0.35442 0.00035958 1015.07340444693 1018.57878854218 115.64 0.43005 115.64 115.42 115.85 0 127 27 8 0 0 0 1.4023E-07 3 75533 63.894 63.894 1 1.2341 1.3335 0 21916000 10338000 11577000 14277 1581 5443 5575 22259;22260;22261 22260 GSPLLGPVVPGPSPIPSVTEK 21 1 0 Unmodified _GSPLLGPVVPGPSPIPSVTEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1015.0732 2 1014.57242 2027.13029 61955.78 0.43014 0.00043641 -0.20537 -0.00020836 0.22478 0.00022805 1015.07396661481 1018.57923155212 127.74 0.40213 127.74 127.54 127.94 0 71 15 7 0 0 0 0.0013189 2 76158 34.444 34.444 1 1.5635 1.2175 0 3516500 1447600 2068900 14278 1581 5443 5575 22262;22263 22262 GSPNTASAEATLPR 14 0 1 Unmodified _GSPNTASAEATLPR_ 0 0 0 Q6PJG6 Q6PJG6 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3531 2 686.34678 1370.67901 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.538 1 42.538 42.038 43.038 0 0 0 0 0.042202 1 22637 41.48 26.468 1 14279 1856 5444 5576 22264 22264 GSPTGGAQLLK 11 1 0 Unmodified _GSPTGGAQLLK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.791 2 514.790381 1027.56621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.14 1 41.14 40.64 41.64 0 0 0 0 0.031266 1 21621 48.423 32.27 1 14280 1740 5445 5577 22265 22265 GSQAPSLPNTSEAQK 15 1 0 Unmodified _GSQAPSLPNTSEAQK_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.3793 2 757.875901 1513.73725 70312.8 0.6363 0.00048224 -0.48808 -0.0003699 0.14822 0.00011233 757.875438406076 761.882563313491 37.941 0.36755 37.941 37.728 38.096 0 130 30 6 0 0 0 0.023377 1 19285 29.936 29.936 1 0.92962 0.9606 0 17218000 8088100 9130000 14281 1708 5446 5578 22266 22266 GSQAPSLPNTSEAQK 15 1 0 Unmodified _GSQAPSLPNTSEAQK_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.8828 2 757.875901 1513.73725 70030.56 0.75603 0.00057298 -0.047195 -3.5768E-05 0.70883 0.00053721 757.876116687876 761.882324433982 36.953 0.34901 36.953 36.77 37.119 0 128 26 6 0 0 0 1.3163E-05 2 19062 90.614 90.614 1 0.82902 0.87287 0 23839000 12202000 11637000 14282 1708 5446 5578 22267;22268 22268 GSRPLLSFDPAFDELPHYALLK 22 1 1 Unmodified _GSRPLLSFDPAFDELPHYALLK_ 0 0 1 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.7767 3 829.440792 2485.30055 66577.78 0.96962 0.00080425 -0.11106 -9.2119E-05 0.85856 0.00071213 829.775092261096 835.782625426947 131.39 0.80742 131.39 131.08 131.89 0 336 53 9 0 0 0 5.903E-09 2 85659 77.543 77.543 1 0.97848 1.1761 0 77246000 41041000 36205000 14283 1934 5447 5579 22269;22270 22270 GSRPLLSFDPAFDELPHYALLK 22 1 1 Unmodified _GSRPLLSFDPAFDELPHYALLK_ 0 0 1 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.7761 3 829.440792 2485.30055 66608.38 1.2464 0.0010338 -0.31673 -0.00026271 0.92967 0.00077111 829.774765313053 835.782500218296 131.32 1.6104 131.32 130.2 131.81 1.5259E-05 627 115 9 0 0 0 1.4593E-07 3 87719 58.093 58.093 1 0.89284 1.0504 0 76672000 39922000 36749000 14284 1934 5447 5579 22271;22272;22273 22272 GSRPLLSFDPAFDELPHYALLK 22 1 1 Unmodified _GSRPLLSFDPAFDELPHYALLK_ 0 0 1 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.089 4 622.332413 2485.30055 75332.89 1.0292 0.00064052 -0.75258 -0.00046836 0.27665 0.00017217 622.582911696665 627.088401981129 131.29 1.9549 131.29 129.95 131.91 0 760 140 10 0 0 0 0.00052504 1 87914 32.491 29.568 1 0.97846 1.1531 0 99459000 53061000 46397000 14285 1934 5447 5579 22274 22274 GSRPLLSFDPAFDELPHYALLK 22 1 1 Unmodified _GSRPLLSFDPAFDELPHYALLK_ 0 0 1 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 829.4421 3 829.440792 2485.30055 65915.54 0.68127 0.00056508 -0.68047 -0.00056441 0.00080756 6.6982E-07 829.775129454369 835.782680242603 131.45 0.84048 131.45 131.13 131.98 0 196 39 9 0 0 0 2.0422E-05 2 79744 42.384 35.509 1 1.5498 1.3689 0 42034000 15342000 26691000 14286 1934 5447 5579 22275;22276 22275 GSRPLLSFDPAFDELPHYALLK 22 1 1 Unmodified _GSRPLLSFDPAFDELPHYALLK_ 0 0 1 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.7772 3 829.440792 2485.30055 66118.49 0.99661 0.00082663 -0.5217 -0.00043272 0.47492 0.00039392 829.775130924587 835.445515365448 131.21 0.86598 131.21 130.79 131.65 0 199 37 9 0 0 0 0.013054 1 78657 22.123 19.511 1 1.5875 1.3515 0 40393000 18145000 22248000 14287 1934 5447 5579 22277 22277 GSSAGGGGSGAAAATAATAGGQHR 24 0 1 Unmodified _GSSAGGGGSGAAAATAATAGGQHR_ 0 0 0 C9JLG5;C9JA65;Q75M98;Q75M99;A4D0U1;O00458 C9JLG5 C9JLG5 IFRD1 Interferon-related developmental regulator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.6378 3 643.303686 1926.88923 77241.07 0.13461 8.6592E-05 0.3832 0.00024651 0.5178 0.00033311 643.304257175007 646.639868252676 20.82 0.25512 20.82 20.705 20.961 0 42 11 6 0 0 0 0.0012017 1 5615 13.663 11.972 1 0.19191 0.16736 0 1468800 1195100 273690 14288 658 5448 5580 22278 22278 GSSAVGLTAYVMK 13 1 0 Oxidation (M) _GSSAVGLTAYVM(ox)K_ GSSAVGLTAYVM(1)K GSSAVGLTAYVM(79.66)K 0 1 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RG31 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.3409 2 650.334295 1298.65404 77753.26 0.73997 0.00048123 -1.6145 -0.00105 -0.87453 -0.00056874 650.332912688355 654.340637752279 68.49 0.47438 68.49 68.243 68.718 0 86 37 4 0 0 0 6.3423E-05 1 40790 79.659 79.659 1 1.5466 1.5916 0 18031000 6052100 11979000 14289 235 5449 5581 22279 22279 176 GSSFEMTDDDSAIR 14 0 1 Oxidation (M) _GSSFEM(ox)TDDDSAIR_ GSSFEM(1)TDDDSAIR GSSFEM(45.83)TDDDSAIR 0 1 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.3222 2 773.819935 1545.62532 73120.79 0.97469 0.00075424 -0.15423 -0.00011935 0.82046 0.00063489 774.321260610873 778.824075084789 41.556 0.36994 41.556 41.389 41.759 0 92 30 5 0 0 0 0.0020434 1 22365 45.829 43.888 1 1.4242 1.4333 0 10874000 5357700 5515900 14290 122 5450 5582 22280 22280 104 GSSFEMTDDDSAIR 14 0 1 Oxidation (M) _GSSFEM(ox)TDDDSAIR_ GSSFEM(1)TDDDSAIR GSSFEM(93.35)TDDDSAIR 0 1 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.8242 2 773.819935 1545.62532 NaN NaN NaN -0.05086 -3.9356E-05 NaN NaN NaN NaN 41.235 0.31825 41.235 41.071 41.389 0 0 0 0 1.7614E-06 3 22121 93.345 89.328 1 NaN NaN 0 6613900 0 6613900 14291 122 5450 5582 22281;22282;22283 22281 104 GSSGGGCFGGSSGGYGGLGGFGGGSFR 27 0 1 Unmodified _GSSGGGCFGGSSGGYGGLGGFGGGSFR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1171.995 2 1171.9958 2341.97706 NaN NaN NaN -0.070081 -8.2135E-05 NaN NaN NaN NaN 94.5 0.75243 94.5 94.165 94.918 0 0 0 0 2.1355E-57 1 57240 135.28 132.65 1 NaN NaN 0 106310000 106310000 0 + 14292 1161 5451 5583 22284 22284 GSSGGGCFGGSSGGYGGLGGFGGGSFR 27 0 1 Unmodified _GSSGGGCFGGSSGGYGGLGGFGGGSFR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1171.9974 2 1171.9958 2341.97706 NaN NaN NaN 0.031367 3.6763E-05 NaN NaN NaN NaN 93.784 0.81929 93.784 93.362 94.181 0 0 0 0 0.00084745 1 57977 40.844 37.977 1 NaN NaN 0 113430000 113430000 0 + 14293 1161 5451 5583 22285 22285 GSSGGGCFGGSSGGYGGLGGFGGGSFR 27 0 1 Unmodified _GSSGGGCFGGSSGGYGGLGGFGGGSFR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1172.4968 2 1171.9958 2341.97706 NaN NaN NaN -0.21601 -0.00025316 NaN NaN NaN NaN 107.98 0.91508 107.98 107.64 108.56 -7.6294E-06 0 0 0 1.1909E-10 1 61802 63.998 63.01 1 NaN NaN 0 78553000 78553000 0 + 14294 1161 5451 5583 22286 22286 GSSGGGCFGGSSGGYGGLGGFGGGSFR 27 0 1 Unmodified _GSSGGGCFGGSSGGYGGLGGFGGGSFR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1172.498 2 1171.9958 2341.97706 NaN NaN NaN -0.4171 -0.00048884 NaN NaN NaN NaN 107.95 0.93074 107.95 107.64 108.57 0 0 0 0 5.1531E-17 1 60892 78.794 69.006 1 NaN NaN 0 79688000 79688000 0 + 14295 1161 5451 5583 22287 22287 GSSGVGLTAAVLR 13 0 1 Unmodified _GSSGVGLTAAVLR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.3411 2 594.340769 1186.66699 77660.57 0.88815 0.00052786 -0.3846 -0.00022858 0.50355 0.00029928 594.340512658203 599.344438513985 80.001 0.45943 80.001 79.838 80.298 0 156 34 6 0 0 0 8.8805E-06 3 48717 101.48 101.48 1 1.1283 1.2711 0 46561000 21001000 25560000 14296 560 5452 5584 22288;22289;22290 22289 GSSGVGLTAAVLR 13 0 1 Unmodified _GSSGVGLTAAVLR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.3417 2 594.340769 1186.66699 80932.89 0.353 0.0002098 -0.03644 -2.1658E-05 0.31656 0.00018814 594.340626129332 599.344732747417 92.913 0.52211 92.913 92.647 93.169 0 116 33 5 0 0 0 0.014051 1 50957 37.6 37.6 1 0.66183 0.56526 0 2893100 1639100 1254000 14297 560 5452 5584 22291 22291 GSSGVGLTAAVTTDQETGER 20 0 1 Unmodified _GSSGVGLTAAVTTDQETGER_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 968.4692 2 968.46634 1934.91813 61566.73 -0.015246 -1.4765E-05 0.24934 0.00024147 0.23409 0.00022671 968.968149260234 973.971977668891 64.635 0.65865 64.635 64.269 64.927 0 337 58 8 0 0 0 1.5022E-06 3 36977 73.91 73.91 1 1.239 1.2621 0 30195000 13464000 16731000 14298 568 5453 5585 22292;22293;22294 22293 GSSGVGLTAAVTTDQETGER 20 0 1 Unmodified _GSSGVGLTAAVTTDQETGER_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 968.4671 2 968.46634 1934.91813 61672.63 0.32928 0.0003189 0.17616 0.0001706 0.50544 0.0004895 968.967831517455 973.470730022696 63.534 0.6792 63.534 63.183 63.862 0 297 57 8 0 0 0 1.0499E-17 3 37281 119.96 119.96 1 1.0859 1.1891 0 31016000 13953000 17062000 14299 568 5453 5585 22295;22296;22297 22296 GSSLGAGNVADR 12 0 1 Unmodified _GSSLGAGNVADR_ 0 0 0 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.2801 2 552.275626 1102.5367 NaN NaN NaN -0.25694 -0.0001419 NaN NaN NaN NaN 25.669 0.30683 25.669 25.486 25.793 0 0 0 0 0.006403 1 11228 60.398 44.736 1 NaN NaN 0 3090400 0 3090400 14300 1919 5454 5586 22298 22298 GSSSANPVNSVR 12 0 1 Unmodified _GSSSANPVNSVR_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z7M6;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.7946 2 587.794183 1173.57381 NaN NaN NaN 0.32194 0.00018923 NaN NaN NaN NaN 24.395 0.39508 24.395 24.156 24.552 0 0 0 0 0.0014333 1 10106 78.116 68.111 1 NaN NaN 0 30357000 30357000 0 14301 626 5455 5587 22299 22299 GSSSANPVNSVR 12 0 1 Unmodified _GSSSANPVNSVR_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z7M6;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.7983 2 587.794183 1173.57381 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.359 1 24.359 23.859 24.859 0 0 0 0 1.7315E-10 1 10104 109.16 88.286 1 14302 626 5455 5587 22300 22300 GSSSGGGYSSGSSSYGSGGR 20 0 1 Unmodified _GSSSGGGYSSGSSSYGSGGR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.3594 2 870.856426 1739.6983 NaN NaN NaN -0.096583 -8.411E-05 NaN NaN NaN NaN 17.557 0.17715 17.557 17.473 17.65 0 0 0 0 2.3084E-05 1 4687 64.675 61.25 1 NaN NaN 0 2399000 2399000 0 + 14303 1166 5456 5588 22301 22301 GSSVDGSPLLLFLR 14 0 1 Unmodified _GSSVDGSPLLLFLR_ 0 0 0 Q5HYL4;Q86U38 Q5HYL4 Q5HYL4 DKFZp686E1893;NOP9 Nucleolar protein 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.9128 2 730.909016 1459.80348 75373.31 1.0663 0.00077935 0.13167 9.6236E-05 1.1979 0.00087559 730.909291444943 735.913080474818 129.65 0.39035 129.65 129.47 129.86 0 96 23 6 0 0 0 0.00014743 1 84420 93.561 83.556 1 0.684 0.71344 0 10538000 5811400 4726400 14304 1807 5457 5589 22302 22302 GSSVDGSPLLLFLR 14 0 1 Unmodified _GSSVDGSPLLLFLR_ 0 0 0 Q5HYL4;Q86U38 Q5HYL4 Q5HYL4 DKFZp686E1893;NOP9 Nucleolar protein 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.9133 2 730.909016 1459.80348 75397.65 0.88184 0.00064454 0.18142 0.0001326 1.0633 0.00077715 731.410447950647 735.912742930972 129.17 0.34392 129.17 129.04 129.38 0 81 21 5 0 0 0 6.5263E-05 1 86217 104.82 96.727 1 0.77519 0.7679 0 12199000 7431700 4767600 14305 1807 5457 5589 22303 22303 GSTDNLMDDIER 12 0 1 Oxidation (M) _GSTDNLM(ox)DDIER_ GSTDNLM(1)DDIER GSTDNLM(57.35)DDIER 0 1 0 Q7Z759;Q53HU0;P50990 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.3024 2 691.298638 1380.58272 NaN NaN NaN -0.12307 -8.5079E-05 NaN NaN NaN NaN 44.847 0.41273 44.847 44.523 44.935 0 0 0 0 0.002516 1 24579 57.348 47.693 1 NaN NaN 0 9064300 0 9064300 14306 1592 5458 5590 22304 22304 1374 GSTESCNTTTEDEDLK 16 1 0 Unmodified _GSTESCNTTTEDEDLK_ 0 0 0 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;H0Y6G2;Q8WU40;B3KY86;Q13280;B3KTH7;Q59FI6 Q5SWX3 Q5SWX3 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.8765 2 893.86781 1785.72107 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.243 1 24.243 23.743 24.743 0 0 0 0 0.0023665 1 10009 55.314 49.707 1 14307 475 5459 5591 22305 22305 GSTESCNTTTEDEDLK 16 1 0 Unmodified _GSTESCNTTTEDEDLK_ 0 0 0 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;H0Y6G2;Q8WU40;B3KY86;Q13280;B3KTH7;Q59FI6 Q5SWX3 Q5SWX3 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.876 2 893.86781 1785.72107 NaN NaN NaN 0.61765 0.00055209 NaN NaN NaN NaN 23.988 0.19007 23.988 23.844 24.034 1.9073E-06 0 0 0 3.0112E-06 1 9778 83.617 77.584 1 NaN NaN 0 3673700 0 3673700 14308 475 5459 5591 22306 22306 GSTESCNTTTEDEDLK 16 1 0 Unmodified _GSTESCNTTTEDEDLK_ 0 0 0 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;H0Y6G2;Q8WU40;B3KY86;Q13280;B3KTH7;Q59FI6 Q5SWX3 Q5SWX3 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.8676 2 893.86781 1785.72107 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24 1 24 23.5 24.5 0 0 0 0 0.0070524 1 9807 49.423 43.817 1 14309 475 5459 5591 22307 22307 GSTHPQPGVSPPAAPAAPGPK 21 1 0 Unmodified _GSTHPQPGVSPPAAPAAPGPK_ 0 0 0 A8K132;O94925;Q53TX0 A8K132 A8K132 GLS Glutaminase kidney isoform, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.6745 3 641.002396 1919.98536 76374.97 0.66346 0.00042528 0.2639 0.00016916 0.92736 0.00059444 641.336968153857 643.673664132209 42.975 0.42238 42.975 42.792 43.214 3.8147E-06 106 33 5 0 0 0 2.1836E-07 2 23275 56.719 53.278 1 3.2125 3.2146 0 15514000 4453400 11061000 14310 701 5460 5592 22308;22309 22308 GSTLDLSDLEAEK 13 1 0 Unmodified _GSTLDLSDLEAEK_ 0 0 0 Q59GX7;O00767 Q59GX7 Q59GX7 SCD Acyl-CoA desaturase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3408 2 689.340829 1376.6671 72005.62 0.91655 0.00063182 0.32409 0.00022341 1.2406 0.00085522 689.340914456649 693.348234120649 85.137 0.56245 85.137 84.872 85.435 0 152 47 4 0 0 0 0.006618 1 52398 59.418 53.86 1 0.86628 0.89638 0 18601000 9632600 8968800 14311 1365 5461 5593 22310 22310 GSTMEEELENITTK 14 1 0 Oxidation (M) _GSTM(ox)EEELENITTK_ GSTM(1)EEELENITTK GSTM(63.41)EEELENITTK 0 1 0 A8K2S1;P47712;B4DZI4 A8K2S1 A8K2S1 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.3735 2 799.366718 1596.71888 NaN NaN NaN 0.21429 0.0001713 NaN NaN NaN NaN 59.082 0.27495 59.082 58.898 59.173 -3.8147E-06 0 0 0 0.00096043 1 33581 63.408 52.195 1 NaN NaN 0 5377300 0 5377300 14312 712 5462 5594 22311 22311 548 GSVDQYLLR 9 0 1 Unmodified _GSVDQYLLR_ 0 0 0 Q8NCN4;H0YEQ1 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.7866 2 525.782556 1049.55056 86400.03 0.26745 0.00014062 0.037659 1.98E-05 0.30511 0.00016042 525.782950189063 530.786355951456 82.803 0.45232 82.803 82.626 83.079 7.6294E-06 80 27 5 0 0 0 0.046953 1 45057 39.253 25.25 1 1.8039 1.583 0 1724900 685320 1039600 14313 1923 5463 5595 22312 22312 GSVDSNWIVGATLEK 15 1 0 Unmodified _GSVDSNWIVGATLEK_ 0 0 0 O96008 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.4105 2 788.404295 1574.79404 67432.17 0.99386 0.00078356 0.047367 3.7344E-05 1.0412 0.00082091 788.403030099987 792.410783304778 100.93 0.8748 100.93 100.57 101.45 7.6294E-06 376 64 9 0 0 0 1.1323E-07 2 61796 110.38 110.38 1 1.1435 1.2944 0 88334000 41253000 47081000 14314 1433 5464 5596 22313;22314 22313 GSVDSNWIVGATLEK 15 1 0 Unmodified _GSVDSNWIVGATLEK_ 0 0 0 O96008 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.404 2 788.404295 1574.79404 68415.8 0.76239 0.00060107 -0.4201 -0.00033121 0.34229 0.00026986 788.4030976722 792.410872936366 100.29 0.69238 100.29 99.862 100.55 0 282 56 6 0 0 0 1.3899E-10 2 62875 121.69 121.69 1 1.1549 1.2911 0 102160000 52099000 50059000 14315 1433 5464 5596 22315;22316 22316 GSVDSNWIVGATLEK 15 1 0 Unmodified _GSVDSNWIVGATLEK_ 0 0 0 O96008 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.4097 2 788.404295 1574.79404 68948.63 0.99516 0.00078459 -0.81562 -0.00064304 0.17955 0.00014156 788.402355870199 792.410825549684 113.27 0.63713 113.27 113.04 113.68 7.6294E-06 129 31 6 0 0 0 0.00070519 1 65883 51.774 51.774 1 2.5907 2.029 0 11618000 3950700 7667800 14316 1433 5464 5596 22317 22317 GSVDSNWIVGATLEK 15 1 0 Unmodified _GSVDSNWIVGATLEK_ 0 0 0 O96008 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.4106 2 788.404295 1574.79404 69021.05 0.77365 0.00060995 -0.61523 -0.00048505 0.15842 0.0001249 788.904711174664 792.411005160069 113.14 0.63554 113.14 112.94 113.57 0 131 31 6 0 0 0 0.014891 1 64883 33.204 33.204 1 2.6529 2.1754 0 8848100 2518500 6329600 14317 1433 5464 5596 22318 22318 GSVHSVSFSPDGR 13 0 1 Unmodified _GSVHSVSFSPDGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3264 2 666.320565 1330.62658 74997.31 0.47735 0.00031807 0.26623 0.0001774 0.74358 0.00049546 666.320448145762 671.32491330651 34.531 0.33028 34.531 34.4 34.73 0 106 25 7 0 0 0 4.81E-24 2 17291 160.53 145.86 1 1.0201 1.1276 0 57624000 26709000 30915000 14318 1756 5465 5597 22319;22320 22320 GSVHSVSFSPDGR 13 0 1 Unmodified _GSVHSVSFSPDGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.8855 3 444.549469 1330.62658 89583.02 -0.081939 -3.6426E-05 0.061849 2.7495E-05 -0.02009 -8.9311E-06 444.549476332983 447.885547516751 34.525 0.49501 34.525 34.337 34.832 0 188 39 8 0 0 0 0.016247 1 17277 17.271 13.949 1 0.93474 1.0745 0 142840000 71421000 71418000 14319 1756 5465 5597 22321 22321 GSVHSVSFSPDGR 13 0 1 Unmodified _GSVHSVSFSPDGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.8855 3 444.549469 1330.62658 90181.72 0.015077 6.7023E-06 0.018164 8.0748E-06 0.033241 1.4777E-05 444.549452484775 447.885511266339 33.488 0.49467 33.488 33.301 33.796 0 243 40 9 0 0 0 3.3926E-06 2 16731 77.644 74.421 1 0.93701 1.0693 0 144030000 69056000 74971000 14320 1756 5465 5597 22322;22323 22322 GSVHSVSFSPDGR 13 0 1 Unmodified _GSVHSVSFSPDGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3217 2 666.320565 1330.62658 74009.67 0.51159 0.00034088 0.19167 0.00012772 0.70326 0.0004686 666.320685629012 671.32479552426 33.492 0.37743 33.492 33.311 33.688 0 142 30 6 0 0 0 9.7521E-09 1 16754 143.5 143.5 1 0.93153 1.0829 0 59775000 30586000 29189000 14321 1756 5465 5597 22324 22324 GSVHSVSFSPDGR 13 0 1 Unmodified _GSVHSVSFSPDGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.3251 2 666.320565 1330.62658 75070.37 0.34458 0.0002296 0.24516 0.00016336 0.58975 0.00039296 666.320532272021 671.324763622418 39.335 0.37888 39.335 39.151 39.53 0 163 31 7 0 0 0 0.0012299 2 17994 58.676 54.064 1 1.2049 1.0331 0 6172800 2487800 3685000 14322 1756 5465 5597 22325;22326 22326 GSVHSVSFSPDGR 13 0 1 Unmodified _GSVHSVSFSPDGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 447.8858 3 444.549469 1330.62658 89799.98 -0.18434 -8.1948E-05 0.1755 7.8017E-05 -0.0088436 -3.9314E-06 444.549529272818 447.885582463527 39.337 0.58926 39.337 39.084 39.674 0 272 45 9 0 0 0 0.017977 1 17920 19.286 16.063 1 1.1573 0.97013 0 25421000 12132000 13289000 14323 1756 5465 5597 22327 22327 GSVHSVSFSPDGR 13 0 1 Unmodified _GSVHSVSFSPDGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.3251 2 666.320565 1330.62658 74525.33 0.31589 0.00021048 0.21962 0.00014634 0.53551 0.00035682 666.320465194957 671.324794932833 39.306 0.4339 39.306 39.115 39.549 0 150 31 7 0 0 0 0.028608 2 17489 33.89 32.034 1 1.181 0.98416 0 6853100 3044900 3808200 14324 1756 5465 5597 22328;22329 22329 GSVHSVSFSPDGR 13 0 1 Unmodified _GSVHSVSFSPDGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 447.8856 3 444.549469 1330.62658 89585.19 -0.14279 -6.3478E-05 0.051684 2.2976E-05 -0.091108 -4.0502E-05 444.54947074056 447.885518766263 39.32 0.56014 39.32 39.087 39.647 0 226 41 9 0 0 0 0.0034755 1 17408 31.526 28.204 1 1.1365 0.96907 0 19851000 9459200 10392000 14325 1756 5465 5597 22330 22330 GSVLEPEGTVEIK 13 1 0 Unmodified _GSVLEPEGTVEIK_ 0 0 0 A0A024R0Y2;B2ZZ90;Q13085;Q7Z5W8;Q59FY4;B4DIG6;B4DIW1;B4DWK9;B4DIR2;B4DK31 A0A024R0Y2 A0A024R0Y2 hCG_30204;ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.3718 2 679.364107 1356.71366 80229.21 0.61748 0.00041949 -0.49586 -0.00033687 0.12161 8.2621E-05 679.363132758843 683.371389979353 74.606 0.38333 74.606 74.438 74.821 0 93 33 4 0 0 0 0.0085865 1 44948 43.77 43.77 1 1.1767 1.1887 0 13200000 7147100 6053300 14326 60 5466 5598 22331 22331 GSVMPSVIR 9 0 1 Oxidation (M) _GSVM(ox)PSVIR_ GSVM(1)PSVIR GSVM(61.96)PSVIR 0 1 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.2646 2 481.260402 960.506251 89705.02 0.14918 7.1794E-05 0.8116 0.00039059 0.96078 0.00046238 481.260991813721 486.264660503354 36.615 0.43817 36.615 36.312 36.751 -3.8147E-06 107 40 4 0 0 0 0.0036175 1 18531 61.962 44.577 1 1.3698 1.3687 0 8840000 4101800 4738100 14327 1565 5467 5599 22332 22332 1320 GSVPLSSSPPATHFPDETEITNPVPK 26 1 0 Unmodified _GSVPLSSSPPATHFPDETEITNPVPK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 905.1265 3 902.120335 2703.33918 63536.42 0.78927 0.00071202 0.08899 8.028E-05 0.87826 0.0007923 902.454524412478 905.125690598628 95.362 0.7264 95.362 95.068 95.794 0 510 56 12 0 0 0 1.8413E-06 2 57989 43.895 43.895 1 0.74699 0.84629 0 155040000 92234000 62805000 14328 1471 5468 5600 22333;22334 22334 GSVPLSSSPPATHFPDETEITNPVPK 26 1 0 Unmodified _GSVPLSSSPPATHFPDETEITNPVPK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.1277 3 902.120335 2703.33918 63854.71 0.69552 0.00062744 0.21238 0.0001916 0.9079 0.00081904 902.45458210254 905.125967768552 94.63 0.75097 94.63 94.303 95.054 7.6294E-06 532 62 12 0 0 0 1.0558E-06 4 58683 46.307 46.307 1 0.81633 0.94644 0 216510000 121550000 94966000 14329 1471 5468 5600 22335;22336;22337;22338 22337 GSVPLSSSPPATHFPDETEITNPVPK 26 1 0 Unmodified _GSVPLSSSPPATHFPDETEITNPVPK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 902.4556 3 902.120335 2703.33918 63603.66 0.5772 0.00052071 0.010097 9.1089E-06 0.5873 0.00052982 902.454615473096 905.125939247967 108.52 0.69049 108.52 108.28 108.97 0 298 32 13 0 0 0 0.00074418 2 62256 26.841 26.841 1 0.7062 0.61109 0 116170000 67770000 48398000 14330 1471 5468 5600 22339;22340 22339 GSVPLSSSPPATHFPDETEITNPVPK 26 1 0 Unmodified _GSVPLSSSPPATHFPDETEITNPVPK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 905.1268 3 902.120335 2703.33918 63962.52 0.2871 0.000259 0.21479 0.00019376 0.50189 0.00045276 902.454850112814 905.126142182294 108.41 0.67229 108.41 108.18 108.85 0 274 33 13 0 0 0 1.1697E-06 2 61304 45.957 45.957 1 0.7443 0.63578 0 104810000 58739000 46071000 14331 1471 5468 5600 22341;22342 22342 GSVSCPTCQAVGR 13 0 1 Unmodified _GSVSCPTCQAVGR_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6 G3XAG1 G3XAG1 ZNF512 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8145 2 689.813735 1377.61292 73298.85 0.82043 0.00056594 0.004383 3.0235E-06 0.82481 0.00056897 689.813880538798 694.818023785901 25.597 0.32902 25.597 25.441 25.77 1.9073E-06 65 17 6 0 0 0 1.5313E-09 2 11163 123.75 113.52 1 0.3649 0.37854 0 21926000 14211000 7715200 14332 1275 5469 5601 22343;22344 22343 GSVSCPTCQAVGR 13 0 1 Unmodified _GSVSCPTCQAVGR_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6 G3XAG1 G3XAG1 ZNF512 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.8146 2 689.813735 1377.61292 72650.15 0.30966 0.00021361 -0.15015 -0.00010357 0.15952 0.00011004 689.813866699317 694.817965337598 29.418 0.462 29.418 29.209 29.671 0 166 30 8 0 0 0 0.00027703 1 11946 66.758 62.741 1 0.78249 0.67222 0 7996900 4565800 3431100 14333 1275 5469 5601 22345 22345 GSVSCPTCQAVGR 13 0 1 Unmodified _GSVSCPTCQAVGR_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6 G3XAG1 G3XAG1 ZNF512 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.315 2 689.813735 1377.61292 72149.28 0.14556 0.00010041 -0.11142 -7.686E-05 0.034136 2.3547E-05 689.813779924927 694.818097523572 29.721 0.41832 29.721 29.536 29.955 0 150 27 7 0 0 0 0.00035286 2 11635 63.073 60.454 1 0.81876 0.68053 0 7607800 4316100 3291700 14334 1275 5469 5601 22346;22347 22347 GSVTLSEIR 9 0 1 Unmodified _GSVTLSEIR_ 0 0 0 B4DSL6;A8K5D9;A0A024RA49;Q9NQW6;H7C1C2;H7C1K5 B4DSL6 B4DSL6 ANLN Actin-binding protein anillin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.2729 2 481.269281 960.52401 NaN NaN NaN 0.26607 0.00012805 NaN NaN NaN NaN 50.905 0.39606 50.905 50.793 51.189 0 0 0 0 0.023349 1 28787 56.258 19.877 1 NaN NaN 0 10512000 0 10512000 14335 294 5470 5602 22348 22348 GSYGDLGGPIITTQVTIPK 19 1 0 Unmodified _GSYGDLGGPIITTQVTIPK_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;B3KU16;S4R359 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 959.0198 2 959.020023 1916.02549 64846.49 0.56179 0.00053876 0.2814 0.00026987 0.84319 0.00080863 959.522659145101 963.027705142524 111.09 0.45208 111.09 110.9 111.35 0 162 30 7 0 0 0 2.06E-22 3 69800 152 152 1 1.3011 1.3999 0 40411000 16687000 23724000 14336 102 5471 5603 22349;22350;22351 22349 GSYGDLGGPIITTQVTIPK 19 1 0 Unmodified _GSYGDLGGPIITTQVTIPK_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;B3KU16;S4R359 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.5235 2 959.020023 1916.02549 64192.73 0.607 0.00058212 -0.16593 -0.00015913 0.44106 0.00042299 959.019378086719 963.528585886236 110.57 0.44524 110.57 110.35 110.79 -7.6294E-06 181 32 7 0 0 0 1.3166E-17 3 71124 124.3 124.3 1 1.4788 1.6414 0 48871000 18941000 29930000 14337 102 5471 5603 22352;22353;22354 22353 GSYGDLGGPIITTQVTIPK 19 1 0 Unmodified _GSYGDLGGPIITTQVTIPK_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;B3KU16;S4R359 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 963.0279 2 959.020023 1916.02549 NaN NaN NaN -0.28254 -0.00027096 NaN NaN NaN NaN 122.26 0.3908 122.26 122.07 122.46 0 0 0 0 3.4985E-17 1 72916 107.46 98.415 1 NaN NaN 0 10127000 0 10127000 14338 102 5471 5603 22355 22355 GSYGDLGGPIITTQVTIPK 19 1 0 Unmodified _GSYGDLGGPIITTQVTIPK_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;B3KU16;S4R359 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 963.5277 2 959.020023 1916.02549 64508.34 0.52294 0.00050151 -0.45692 -0.00043819 0.066021 6.3316E-05 959.018611210983 963.528247515039 122.12 0.40904 122.12 121.91 122.32 0 106 20 7 0 0 0 0.00024353 2 71912 69.314 69.314 1 1.1163 0.89703 0 17114000 7076400 10037000 14339 102 5471 5603 22356;22357 22357 GSYLTVTLQRPTK 13 1 1 Unmodified _GSYLTVTLQRPTK_ 0 0 1 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.4147 2 732.414465 1462.81438 73096.99 0.57681 0.00042247 0.09399 6.884E-05 0.6708 0.00049131 732.414508632032 741.425755966011 74.138 0.45878 74.138 73.895 74.354 0 184 35 7 0 0 0 0.0042304 1 38439 60.49 52.564 1 0.51147 0.42964 0 4770200 3322000 1448200 14340 1323 5472 5604 22358 22358 GSYVSIHSSGFR 12 0 1 Unmodified _GSYVSIHSSGFR_ 0 0 0 A0A024RCM3;Q13838;Q5STU3;F6WLT2;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;F6QYI9;A0A0G2JJL7;F6R6M7;K7EN69;Q7KYK3;K7ENP6;A0A0G2JHN7;K7EL56;K7EIL8;F6U6E2;F6S2B7;F6SXL5;B4DH55;B4DF34;O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;BAT1;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.3002 2 648.820201 1295.62585 74374.41 0.84296 0.00054693 -0.23272 -0.000151 0.61023 0.00039593 648.820151052818 653.824308624858 42.876 0.61714 42.876 42.536 43.153 0 241 50 7 0 0 0 0.032232 1 23104 44.425 44.425 1 1.5192 1.7652 0 63331000 27166000 36165000 14341 1359;362 5473 5605 22359 22359 GSYVSIHSSGFR 12 0 1 Unmodified _GSYVSIHSSGFR_ 0 0 0 A0A024RCM3;Q13838;Q5STU3;F6WLT2;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;F6QYI9;A0A0G2JJL7;F6R6M7;K7EN69;Q7KYK3;K7ENP6;A0A0G2JHN7;K7EL56;K7EIL8;F6U6E2;F6S2B7;F6SXL5;B4DH55;B4DF34;O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;BAT1;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.8253 2 648.820201 1295.62585 75864.47 0.46333 0.00030062 0.26289 0.00017057 0.72622 0.00047119 648.820216774903 653.824435636077 51.168 0.77348 51.168 50.804 51.578 -3.8147E-06 257 52 6 0 0 0 0.01474 1 25063 41.283 41.283 1 0.78598 0.66313 0 4751100 2546100 2205000 14342 1359;362 5473 5605 22360 22360 GSYVSIHSSGFR 12 0 1 Unmodified _GSYVSIHSSGFR_ 0 0 0 A0A024RCM3;Q13838;Q5STU3;F6WLT2;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;F6QYI9;A0A0G2JJL7;F6R6M7;K7EN69;Q7KYK3;K7ENP6;A0A0G2JHN7;K7EL56;K7EIL8;F6U6E2;F6S2B7;F6SXL5;B4DH55;B4DF34;O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;BAT1;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.8251 2 648.820201 1295.62585 75225.54 0.36881 0.00023929 0.53191 0.00034512 0.90072 0.00058441 648.820224665339 653.824823522029 51.228 0.83346 51.228 50.943 51.777 -3.8147E-06 256 56 8 0 0 0 0.00045542 2 24636 59.542 59.542 1 0.80807 0.67097 0 5862100 3252600 2609500 14343 1359;362 5473 5605 22361;22362 22362 GTAAAAAAAAAAAK 14 1 0 Unmodified _GTAAAAAAAAAAAK_ 0 0 0 A8K3Q9 A8K3Q9 A8K3Q9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.806 2 543.798737 1085.58292 81847.5 0.65014 0.00035354 -0.066937 -3.64E-05 0.5832 0.00031714 543.798693404141 547.805779192567 34.927 0.92433 34.927 34.657 35.581 0 452 83 9 0 0 0 1.2202E-38 3 17441 175.07 159.41 1 0.89482 1.0673 0 710860000 359780000 351080000 14344 725 5474 5606 22363;22364;22365 22364 GTAAAAAAAAAAAK 14 1 0 Unmodified _GTAAAAAAAAAAAK_ 0 0 0 A8K3Q9 A8K3Q9 A8K3Q9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.8061 2 543.798737 1085.58292 81563.77 0.41531 0.00022584 0.14964 8.1376E-05 0.56495 0.00030722 543.798847167776 547.80589582721 33.987 0.79315 33.987 33.796 34.589 0 331 60 9 0 0 0 1.6949E-47 3 17070 187.55 171.89 1 0.92884 1.0957 0 804410000 398420000 406000000 14345 725 5474 5606 22366;22367;22368 22366 GTAAAAAAAAAAAK 14 1 0 Unmodified _GTAAAAAAAAAAAK_ 0 0 0 A8K3Q9 A8K3Q9 A8K3Q9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.8052 2 543.798737 1085.58292 80332.62 0.4249 0.00023106 -0.080839 -4.396E-05 0.34406 0.0001871 543.798937519233 547.805382433847 40.487 1.3264 40.487 40.126 41.452 3.8147E-06 375 103 7 0 0 0 0.00016133 1 18567 74.849 66.316 1 1.0066 0.86723 0 95803000 48682000 47121000 14346 725 5474 5606 22369 22369 GTAAAAAAAAAAAK 14 1 0 Unmodified _GTAAAAAAAAAAAK_ 0 0 0 A8K3Q9 A8K3Q9 A8K3Q9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.8057 2 543.798737 1085.58292 81178.34 0.29319 0.00015944 -0.45764 -0.00024887 -0.16445 -8.943E-05 543.798538772277 547.805614640972 40.621 1.5878 40.621 40.347 41.935 -3.8147E-06 433 123 8 0 0 0 9.0347E-05 3 18137 86.879 78.347 1 0.96518 0.82037 0 76267000 37774000 38493000 14347 725 5474 5606 22370;22371;22372 22370 GTAEPITVTIVPAYR 15 0 1 Unmodified _GTAEPITVTIVPAYR_ 0 0 0 B3KN79;Q15646 B3KN79 B3KN79 OASL 2-5-oligoadenylate synthase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.4424 2 794.44068 1586.86681 69777.66 0.50945 0.00040473 0.48907 0.00038854 0.99853 0.00079327 794.440855002512 799.444992683341 102.76 0.38788 102.76 102.59 102.98 0 77 33 5 0 0 0 0.020022 1 63316 31.228 15.962 1 1.4247 1.4752 0 5932600 2145400 3787200 14348 911 5475 5607 22373 22373 GTAEPITVTIVPAYR 15 0 1 Unmodified _GTAEPITVTIVPAYR_ 0 0 0 B3KN79;Q15646 B3KN79 B3KN79 OASL 2-5-oligoadenylate synthase-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.4412 2 794.44068 1586.86681 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.08 1 102.08 101.58 102.58 0 0 0 0 0.027881 1 64372 42.556 31.798 1 14349 911 5475 5607 22374 22374 GTAEPITVTIVPAYR 15 0 1 Unmodified _GTAEPITVTIVPAYR_ 0 0 0 B3KN79;Q15646 B3KN79 B3KN79 OASL 2-5-oligoadenylate synthase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 799.4456 2 794.44068 1586.86681 70006.3 0.8377 0.0006655 0.30148 0.0002395 1.1392 0.00090501 794.942215178973 799.445033534456 114.84 0.42243 114.84 114.64 115.06 -7.6294E-06 87 19 6 0 0 0 0.0065487 2 67128 36.417 33.095 1 1.0002 0.8428 0 4666900 2114900 2552000 14350 911 5475 5607 22375;22376 22375 GTAEPITVTIVPAYR 15 0 1 Unmodified _GTAEPITVTIVPAYR_ 0 0 0 B3KN79;Q15646 B3KN79 B3KN79 OASL 2-5-oligoadenylate synthase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 794.4406 2 794.44068 1586.86681 70446.86 0.76903 0.00061095 0.061753 4.9059E-05 0.83079 0.00066001 794.440620192078 799.444834562458 114.68 0.40681 114.68 114.46 114.87 7.6294E-06 80 17 6 0 0 0 0.0025694 2 66103 44.543 44.543 1 1.2991 1.1038 0 4618900 2158600 2460200 14351 911 5475 5607 22377;22378 22378 GTAFVTLLNGEQAEAAINAFHQSR 24 0 1 Unmodified _GTAFVTLLNGEQAEAAINAFHQSR_ 0 0 0 A0A087WZ13;E9PAU2;Q8IY67 A0A087WZ13 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.77 3 849.097976 2544.2721 69183.38 0.67853 0.00057613 -1.0192 -0.00086538 -0.34065 -0.00028924 849.431610990133 852.767759684588 117.78 0.40009 117.78 117.6 118 0 64 24 5 0 0 0 1.67E-09 2 75456 57.578 57.578 1 1.4812 1.5073 0 7187600 3409000 3778500 14352 438 5476 5608 22379;22380 22379 GTATFDGTAIANAVVK 16 1 0 Unmodified _GTATFDGTAIANAVVK_ 0 0 0 P52701;A0A087WYT6;Q6LAI4 P52701 P52701 MSH6 DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.3925 2 768.406837 1534.79912 71853.58 0.83208 0.00063938 1.169 0.00089825 2.0011 0.0015376 768.4075142926 772.414819046976 93.65 0.5499 93.65 93.432 93.982 0 149 48 6 0 0 0 0.00015481 2 56963 71.153 63.586 1 0.79875 0.78455 0 23219000 11829000 11390000 14353 1601 5477 5609 22381;22382 22382 GTATFDGTAIANAVVK 16 1 0 Unmodified _GTATFDGTAIANAVVK_ 0 0 0 P52701;A0A087WYT6;Q6LAI4 P52701 P52701 MSH6 DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.9107 2 768.406837 1534.79912 70810.78 0.84607 0.00065012 0.74066 0.00056913 1.5867 0.0012193 768.407141542394 772.414550497093 92.98 0.32505 92.98 92.771 93.096 0 84 26 4 0 0 0 3.0478E-06 2 57647 90.434 90.434 1 0.93519 0.93587 0 13991000 6751500 7239700 14354 1601 5477 5609 22383;22384 22384 GTATFDGTAIANAVVK 16 1 0 Unmodified _GTATFDGTAIANAVVK_ 0 0 0 P52701;A0A087WYT6;Q6LAI4 P52701 P52701 MSH6 DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.9097 2 768.406837 1534.79912 70810.78 0.78701 0.00060475 0.71144 0.00054668 1.4985 0.0011514 768.908489619409 772.916353549999 93.121 0.20764 93.121 93.048 93.256 0 45 18 4 0 0 0 0.00012268 1 57762 77.597 70.709 1 0.77453 0.78416 0 13021000 7676900 5344400 14355 1601 5477 5609 22385 22385 GTAYTFFTPGNLK 13 1 0 Unmodified _GTAYTFFTPGNLK_ 0 0 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.37 2 708.861534 1415.70852 NaN NaN NaN -0.43821 -0.00031063 NaN NaN NaN NaN 99.278 0.75694 99.278 98.885 99.642 7.6294E-06 0 0 0 0.029984 1 60905 42.743 31.914 1 NaN NaN 0 17098000 0 17098000 14356 1801 5478 5610 22386 22386 GTAYTFFTPGNLK 13 1 0 Unmodified _GTAYTFFTPGNLK_ 0 0 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.8692 2 708.861534 1415.70852 72491.04 0.99002 0.00070179 -0.17394 -0.0001233 0.81608 0.00057849 708.8612949197 712.868465792221 112.06 0.49545 112.06 111.84 112.33 -7.6294E-06 140 30 8 0 0 0 0.031774 1 64984 41.283 41.283 1 1.0025 0.80497 0 7741400 3945100 3796200 14357 1801 5478 5610 22387 22387 GTAYTFFTPGNLK 13 1 0 Unmodified _GTAYTFFTPGNLK_ 0 0 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.8696 2 708.861534 1415.70852 72739.64 0.63299 0.0004487 0.25932 0.00018382 0.89231 0.00063252 708.861634661261 712.86874142138 111.87 0.45335 111.87 111.65 112.11 0 119 24 7 0 0 0 0.027279 1 63949 42.743 42.743 1 0.85545 0.69851 0 8042000 4108900 3933100 14358 1801 5478 5610 22388 22388 GTCVEGTIPK 10 1 0 Unmodified _GTCVEGTIPK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5;F5H2X1;B7Z842 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.2689 2 531.268424 1060.5223 NaN NaN NaN 1.2916 0.00068617 NaN NaN NaN NaN 34.418 0.29576 34.418 34.304 34.599 0 0 0 0 0.03824 1 17464 49.85 35.848 1 NaN NaN 0 5849800 5849800 0 14359 1954 5479 5611 22389 22389 GTDDFDFAGSFQGPR 15 0 1 Unmodified _GTDDFDFAGSFQGPR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.8566 2 808.852426 1615.6903 69366.32 1.1264 0.00091106 -0.22123 -0.00017895 0.90513 0.00073211 808.85162834137 813.85649061987 96.501 0.77111 96.501 96.131 96.902 0 298 65 6 0 0 0 2.5147E-47 2 58846 178.71 174.86 1 1.2482 1.3395 0 46551000 17825000 28726000 14360 836;1683 5480 5612 22390;22391 22391 GTDDFDFAGSFQGPR 15 0 1 Unmodified _GTDDFDFAGSFQGPR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.3548 2 808.852426 1615.6903 68233.81 0.91186 0.00073756 -0.20687 -0.00016732 0.705 0.00057024 808.851965195601 813.856490075088 95.864 0.67159 95.864 95.521 96.193 0 272 55 6 0 0 0 1.0066E-10 2 59706 122.69 122.69 1 1.1224 1.2923 0 53954000 24388000 29565000 14361 836;1683 5480 5612 22392;22393 22393 GTDDFDFAGSFQGPR 15 0 1 Unmodified _GTDDFDFAGSFQGPR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 813.857 2 808.852426 1615.6903 68044.55 0.72902 0.00058967 -0.061542 -4.9778E-05 0.66748 0.00053989 808.851962831845 813.856632436894 109.27 0.60382 109.27 108.94 109.55 0 174 28 8 0 0 0 1.3063E-05 2 62809 90.689 90.689 1 1.4392 1.1783 0 13153000 5883800 7269500 14362 836;1683 5480 5612 22394;22395 22394 GTDDFDFAGSFQGPR 15 0 1 Unmodified _GTDDFDFAGSFQGPR_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 808.8535 2 808.852426 1615.6903 68836.23 0.71864 0.00058128 0.041375 3.3466E-05 0.76002 0.00061474 808.852186809542 813.856544612361 109.27 0.6692 109.27 108.98 109.65 0 171 30 8 0 0 0 5.205E-06 2 61987 96.604 96.604 1 1.4244 1.1581 0 12330000 4770700 7559000 14363 836;1683 5480 5612 22396;22397 22397 GTDLSNLPVTYYSQK 15 1 0 Unmodified _GTDLSNLPVTYYSQK_ 0 0 0 V9HWD1;B3KNK0;Q4W5G0 V9HWD1 V9HWD1 HEL106;TIGD2 Tigger transposable element-derived protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 843.4241 2 843.422684 1684.83082 68066.35 0.45097 0.00038036 0.54041 0.00045579 0.99138 0.00083616 843.423090457902 847.430554750162 100.9 0.43024 100.9 100.69 101.12 0 86 28 5 0 0 0 0.03046 1 57087 36.982 36.982 1 1.0916 0.85343 0 3240300 1698100 1542200 14364 914 5481 5613 22398 22398 GTDLSNLPVTYYSQK 15 1 0 Unmodified _GTDLSNLPVTYYSQK_ 0 0 0 V9HWD1;B3KNK0;Q4W5G0 V9HWD1 V9HWD1 HEL106;TIGD2 Tigger transposable element-derived protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 847.4313 2 843.422684 1684.83082 67428.79 0.48111 0.00040578 -0.061891 -5.22E-05 0.41922 0.00035358 843.42246690791 847.429882981367 100.83 0.38771 100.83 100.63 101.02 7.6294E-06 98 29 5 0 0 0 0.0042107 1 56194 39.878 25.002 1 1.0442 0.84836 0 2935900 1550500 1385400 14365 914 5481 5613 22399 22399 GTDTQTPAVLSPSK 14 1 0 Unmodified _GTDTQTPAVLSPSK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.3723 2 701.364638 1400.71472 73252.66 0.84372 0.00059175 -0.16965 -0.00011898 0.67407 0.00047277 701.36447318991 705.371610235189 47.357 0.61481 47.357 47.079 47.694 0 217 54 5 0 0 0 8.1988E-10 2 25575 122.33 114.93 1 1.3002 1.4132 0 47353000 22519000 24834000 14366 1570 5482 5614 22400;22401 22400 GTDTQTPAVLSPSK 14 1 0 Unmodified _GTDTQTPAVLSPSK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8003 2 701.364638 1400.71472 73267.7 0.86312 0.00060536 0.094901 6.656E-05 0.95803 0.00067193 701.364368745301 705.371875352436 46.383 0.54278 46.383 46.057 46.599 -3.8147E-06 195 40 6 0 0 0 0.027591 1 25679 50.207 50.207 1 1.1845 1.3337 0 57673000 25604000 32069000 14367 1570 5482 5614 22402 22402 GTDTQTPAVLSPSK 14 1 0 Unmodified _GTDTQTPAVLSPSK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.3646 2 701.364638 1400.71472 71800.06 0.69098 0.00048463 0.14637 0.00010266 0.83735 0.00058728 701.364704187027 705.371590524581 54.32 0.8197 54.32 53.842 54.662 0 231 63 6 0 0 0 6.6215E-05 1 27043 90.614 84.833 1 0.9829 0.78823 0 8244900 4117000 4127800 14368 1570 5482 5614 22403 22403 GTDTQTPAVLSPSK 14 1 0 Unmodified _GTDTQTPAVLSPSK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.3721 2 701.364638 1400.71472 73526.8 0.43406 0.00030443 0.34559 0.00024238 0.77965 0.00054682 701.364878658991 705.371822073555 54.807 0.70652 54.807 54.473 55.18 -3.8147E-06 225 52 5 0 0 0 3.8972E-05 2 26810 94.767 90.316 1 0.98649 0.80397 0 6629800 3342500 3287300 14369 1570 5482 5614 22404;22405 22405 GTEASSGTEAATGLEGEEK 19 1 0 Unmodified _GTEASSGTEAATGLEGEEK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 916.4183 2 912.410699 1822.80685 63792.12 0.48245 0.0004402 0.25057 0.00022862 0.73302 0.00066881 912.410848901526 916.41809795057 36.832 0.58467 36.832 36.549 37.134 0 364 54 10 0 0 0 1.3166E-17 2 18520 124.3 124.3 1 0.97659 1.107 0 93115000 51329000 41786000 14370 1898 5483 5615 22406;22407 22407 GTEASSGTEAATGLEGEEK 19 1 0 Unmodified _GTEASSGTEAATGLEGEEK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.4182 2 912.410699 1822.80685 63595.12 0.57155 0.00052149 0.00074914 6.8352E-07 0.5723 0.00052217 912.410696641345 916.417796244221 35.975 0.5204 35.975 35.735 36.256 0 292 42 9 0 0 0 3.9877E-254 2 18339 313.32 313.32 1 0.96636 1.0923 0 131190000 66098000 65094000 14371 1898 5483 5615 22408;22409 22409 GTEASSGTEAATGLEGEEK 19 1 0 Unmodified _GTEASSGTEAATGLEGEEK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 916.4188 2 912.410699 1822.80685 63470.7 0.42473 0.00038752 0.1024 9.3433E-05 0.52713 0.00048096 912.410847802209 916.417842720051 43.05 0.86092 43.05 42.741 43.602 0 294 56 8 0 0 0 5.8785E-08 2 20132 88.507 88.507 1 1.3194 1.0983 0 47529000 18832000 28698000 14372 1898 5483 5615 22410;22411 22411 GTEASSGTEAATGLEGEEK 19 1 0 Unmodified _GTEASSGTEAATGLEGEEK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 916.4177 2 912.410699 1822.80685 63496.59 0.25627 0.00023382 0.091213 8.3224E-05 0.34748 0.00031705 912.410846400534 916.417827365171 43.4 0.77777 43.4 43.089 43.867 0 372 48 12 0 0 0 3.9662E-08 2 19794 92.265 92.265 1 1.2598 1.0565 0 47582000 21561000 26021000 14373 1898 5483 5615 22412;22413 22413 GTEDITSPHGIPLDLLDR 18 0 1 Unmodified _GTEDITSPHGIPLDLLDR_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;J3QLR1 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.0084 3 650.337333 1947.99017 75120.45 1.1479 0.00074651 -0.31243 -0.00020319 0.83545 0.00054333 650.671525859689 654.00756690082 108.79 0.99524 108.79 108.43 109.42 -7.6294E-06 391 66 10 0 0 0 3.0105E-09 2 67835 99.044 99.044 1 0.84439 0.96925 0 138280000 79304000 58978000 14374 1076 5484 5616 22414;22415 22414 GTEDITSPHGIPLDLLDR 18 0 1 Unmodified _GTEDITSPHGIPLDLLDR_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;J3QLR1 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.6716 3 650.337333 1947.99017 74001.85 0.83191 0.00054102 -0.37249 -0.00024224 0.45942 0.00029878 650.671498998404 653.673304114781 108.11 1.0053 108.11 107.66 108.66 0 423 69 11 0 0 0 3.2707E-06 2 68991 79.511 79.511 1 0.82088 0.93709 0 145960000 79750000 66209000 14375 1076 5484 5616 22416;22417 22417 GTEDITSPHGIPLDLLDR 18 0 1 Unmodified _GTEDITSPHGIPLDLLDR_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;J3QLR1 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 654.008 3 650.337333 1947.99017 74049.9 1.0494 0.00068244 0.079117 5.1453E-05 1.1285 0.00073389 650.337432471779 653.673435603917 119.34 0.6075 119.34 119.04 119.65 0 158 24 11 0 0 0 1.7877E-05 2 70557 55.589 55.589 1 1.0957 0.92194 0 27416000 13372000 14045000 14376 1076 5484 5616 22418;22419 22418 GTEDITSPHGIPLDLLDR 18 0 1 Unmodified _GTEDITSPHGIPLDLLDR_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;J3QLR1 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.6714 3 650.337333 1947.99017 75009.78 0.75959 0.00049399 -0.23596 -0.00015345 0.52363 0.00034053 650.671568586022 653.673303082428 119.15 0.50709 119.15 118.88 119.39 -7.6294E-06 130 20 11 0 0 0 2.0574E-06 2 69553 82.482 82.482 1 1.121 0.97782 0 40228000 18805000 21423000 14377 1076 5484 5616 22420;22421 22421 GTEITHAVVIK 11 1 0 Unmodified _GTEITHAVVIK_ 0 0 0 A0A024QYX7;B3KNZ4;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B4DVQ5;A1KYQ7;A0A024QYU9;Q99613;B5ME19 A0A024QYX7 A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.3475 2 584.340238 1166.66592 83471.76 0.64228 0.00037531 0.07572 4.4246E-05 0.718 0.00041955 584.340107963048 588.347249274421 42.9 0.3267 42.9 42.695 43.022 0 47 25 4 0 0 0 5.7131E-08 1 23195 116.3 86.138 1 2.3974 2.433 0 12832000 3301800 9530700 14378 6 5485 5617 22422 22422 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 0 2 Unmodified _GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR_ 0 0 1 I3L1Q2;Q8WUZ0 I3L1Q2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1088.2085 3 1087.20412 3258.59053 60017.62 0.061104 6.6433E-05 0.21191 0.00023039 0.27302 0.00029682 1087.87219364936 1094.54537869482 67.481 0.25082 67.481 67.304 67.555 0 55 19 5 0 0 0 0.032747 2 40017 14.053 14.053 1 1.5579 1.5781 0 11017000 3849500 7167100 14379 1319 5486 5618 22423;22424 22424 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 0 2 Unmodified _GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR_ 0 0 1 I3L1Q2;Q8WUZ0 I3L1Q2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1094.5459 3 1087.20412 3258.59053 60102.78 0.030345 3.2991E-05 0.33827 0.00036777 0.36861 0.00040076 1087.53863314891 1094.54498130691 78.901 0.45792 78.901 78.691 79.149 0 104 29 6 0 0 0 0.06051 1 41570 9.3946 7.2001 1 1.8235 1.6302 0 1268000 460900 807100 14380 1319 5486 5618 22425 22425 GTEPSTDGETSEAESNYSVSEHHDTILR 28 0 1 Unmodified _GTEPSTDGETSEAESNYSVSEHHDTILR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.0891 4 762.837979 3047.32281 69546.48 0.25038 0.000191 0.21345 0.00016283 0.46383 0.00035383 763.339563729064 765.591044610724 53.018 0.90335 53.018 52.478 53.381 3.8147E-06 450 68 9 0 0 0 6.1712E-07 2 29311 48.337 48.337 1 0.90868 1.0065 0 63231000 30377000 32854000 14381 1813 5487 5619 22426;22427 22426 GTEPSTDGETSEAESNYSVSEHHDTILR 28 0 1 Unmodified _GTEPSTDGETSEAESNYSVSEHHDTILR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.3404 4 762.837979 3047.32281 68772.66 0.54669 0.00041703 -0.13251 -0.00010108 0.41418 0.00031595 763.088998345492 765.590665717845 51.068 0.62413 51.068 50.807 51.431 -3.8147E-06 358 48 10 0 0 0 6.4214E-66 2 28828 151.18 151.18 1 0.90624 1.0353 0 90393000 45589000 44805000 14382 1813 5487 5619 22428;22429 22428 GTEPSTDGETSEAESNYSVSEHHDTILR 28 0 1 Unmodified _GTEPSTDGETSEAESNYSVSEHHDTILR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1020.4528 3 1016.78155 3047.32281 NaN NaN NaN 0.77401 0.000787 NaN NaN NaN NaN 51.142 0.09734 51.142 51.078 51.176 0 0 0 0 0.046136 1 28939 22.456 12.998 1 NaN NaN 0 4667700 0 4667700 14383 1813 5487 5619 22430 22430 GTEPSTDGETSEAESNYSVSEHHDTILR 28 0 1 Unmodified _GTEPSTDGETSEAESNYSVSEHHDTILR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.5908 4 762.837979 3047.32281 68119.21 0.49663 0.00037885 -0.18277 -0.00013942 0.31386 0.00023942 763.088697924282 765.59061608087 61.878 0.97721 61.878 61.542 62.519 0 573 79 14 0 0 0 0.0024077 1 31597 27.389 27.389 1 1.5367 1.2965 0 28945000 10590000 18355000 14384 1813 5487 5619 22431 22431 GTEPSTDGETSEAESNYSVSEHHDTILR 28 0 1 Unmodified _GTEPSTDGETSEAESNYSVSEHHDTILR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.0892 4 762.837979 3047.32281 68946.88 0.51179 0.00039041 -0.31365 -0.00023926 0.19814 0.00015115 763.088620750145 765.590535577612 62.516 0.70682 62.516 62.194 62.901 0 458 50 13 0 0 0 0.032734 1 31348 22.239 22.239 1 1.4918 1.3013 0 29195000 11622000 17573000 14385 1813 5487 5619 22432 22432 GTEVQVDDIK 10 1 0 Unmodified _GTEVQVDDIK_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.2899 2 552.282586 1102.55062 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.503 1 42.503 42.003 43.003 0 0 0 0 1.2783E-17 1 22612 141.2 84.018 1 14386 2120 5488 5620 22433 22433 GTEVQVDDIK 10 1 0 Unmodified _GTEVQVDDIK_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.2836 2 552.282586 1102.55062 NaN NaN NaN 0.13786 7.6135E-05 NaN NaN NaN NaN 41.874 0.87654 41.874 41.697 42.573 3.8147E-06 0 0 0 4.8781E-08 2 22488 114.39 63.335 1 NaN NaN 0 29790000 29790000 0 14387 2120 5488 5620 22434;22435 22434 GTEVQVDDIK 10 1 0 Unmodified _GTEVQVDDIK_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.2905 2 552.282586 1102.55062 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.621 1 41.621 41.121 42.121 0 0 0 0 1.0883E-22 1 22381 152.34 98.373 1 14388 2120 5488 5620 22436 22436 GTEVQVDDIK 10 1 0 Unmodified _GTEVQVDDIK_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.2899 2 552.282586 1102.55062 80492.13 0.28252 0.00015603 -0.39454 -0.0002179 -0.11203 -6.1871E-05 552.282275311924 556.289619590709 49.414 0.83317 49.414 49.069 49.902 0 269 68 6 0 0 0 0.0029037 2 24053 66.962 48.7 1 1.0337 0.82331 0 6741000 3293500 3447500 14389 2120 5488 5620 22437;22438 22437 GTEVQVDDIK 10 1 0 Unmodified _GTEVQVDDIK_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.2899 2 552.282586 1102.55062 80913.21 0.25218 0.00013928 -0.57606 -0.00031815 -0.32388 -0.00017887 552.282376989733 556.289516427095 49.749 0.78677 49.749 49.319 50.106 0 322 60 8 0 0 0 9.6112E-06 2 23693 105.52 82.833 1 0.96599 0.78669 0 6802300 3676200 3126000 14390 2120 5488 5620 22439;22440 22440 GTGDNENLVR 10 0 1 Unmodified _GTGDNENLVR_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.7664 2 537.762352 1073.51015 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.127 1 24.127 23.627 24.627 0 0 0 0 0.045382 1 9912 45.161 27.775 1 14391 590 5489 5621 22441 22441 GTGEAEEEYVGPR 13 0 1 Unmodified _GTGEAEEEYVGPR_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.8179 2 697.315145 1392.61574 70835.69 0.71155 0.00049617 0.40328 0.00028121 1.1148 0.00077738 697.817456912676 702.318851162371 36.276 0.67497 36.276 35.958 36.633 0 320 63 8 0 0 0 0.0012135 2 18409 58.743 58.743 1 0.72869 0.78364 0 47289000 26955000 20334000 14392 1724 5490 5622 22442;22443 22443 GTGEAEEEYVGPR 13 0 1 Unmodified _GTGEAEEEYVGPR_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3222 2 697.315145 1392.61574 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.043 1 36.043 35.543 36.543 0 0 0 0 0.01593 1 18180 50.284 33.37 1 14393 1724 5490 5622 22444 22444 GTGEAEEEYVGPR 13 0 1 Unmodified _GTGEAEEEYVGPR_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3197 2 697.315145 1392.61574 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.077 1 36.077 35.577 36.577 0 0 0 0 3.1077E-05 1 18198 94.66 83.092 1 14394 1724 5490 5622 22445 22445 GTGEAEEEYVGPR 13 0 1 Unmodified _GTGEAEEEYVGPR_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8181 2 697.315145 1392.61574 72675.8 1.5875 0.001107 -0.097342 -6.7878E-05 1.4902 0.0010391 697.315248070762 702.319079186003 35.441 0.50906 35.441 35.21 35.719 0 246 47 6 0 0 0 0.001556 2 17973 57.348 57.348 1 1.1055 1.2096 0 33843000 18313000 15530000 14395 1724 5490 5622 22446;22447 22447 GTGEAEEEYVGPR 13 0 1 Unmodified _GTGEAEEEYVGPR_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.3187 2 697.315145 1392.61574 72681.77 0.44583 0.00031088 0.020359 1.4196E-05 0.46619 0.00032508 697.315422133933 702.319091127807 41.921 0.65386 41.921 41.67 42.324 0 267 50 8 0 0 0 0.01268 1 19419 39.148 39.148 1 1.0425 0.88281 0 9381200 4504800 4876400 14396 1724 5490 5622 22448 22448 GTGEAEEEYVGPR 13 0 1 Unmodified _GTGEAEEEYVGPR_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.8218 2 697.315145 1392.61574 72318.58 0.21155 0.00014752 0.12377 8.6307E-05 0.33532 0.00023383 697.315402574152 702.319316811937 42.247 0.73255 42.247 41.966 42.699 0 281 53 8 0 0 0 0.041081 1 19043 31.185 31.185 1 1.0844 0.88433 0 9479700 4695500 4784200 14397 1724 5490 5622 22449 22449 GTGIVSAPVPK 11 1 0 Unmodified _GTGIVSAPVPK_ 0 0 0 P15880;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;E9PQD7;I3L404;E9PM36;Q9BSW5 P15880 P15880 RPS2;rps2 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.3028 2 513.303124 1024.5917 84241.71 0.47533 0.00024399 0.08231 4.225E-05 0.55764 0.00028624 513.30313126631 517.310114175793 55.338 0.98228 55.338 54.949 55.931 0 412 86 8 0 0 0 2.1765E-12 2 31050 141.02 121.24 1 1.019 1.2185 0 836470000 416910000 419560000 14398 1485 5491 5623 22450;22451 22451 GTGIVSAPVPK 11 1 0 Unmodified _GTGIVSAPVPK_ 0 0 0 P15880;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;E9PQD7;I3L404;E9PM36;Q9BSW5 P15880 P15880 RPS2;rps2 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.3104 2 513.303124 1024.5917 84657.68 0.36003 0.00018481 -0.011281 -5.7905E-06 0.34875 0.00017902 513.302961895236 517.309990990437 54.272 1.0459 54.272 53.901 54.947 0 473 91 9 0 0 0 0.00026127 2 30894 90.15 90.15 1 0.99107 1.1677 0 566300000 291030000 275280000 14399 1485 5491 5623 22452;22453 22452 GTGIVSAPVPK 11 1 0 Unmodified _GTGIVSAPVPK_ 0 0 0 P15880;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;E9PQD7;I3L404;E9PM36;Q9BSW5 P15880 P15880 RPS2;rps2 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.303 2 513.303124 1024.5917 83542.48 0.19673 0.00010098 0.029485 1.5135E-05 0.22621 0.00011612 513.303090091934 517.310118666634 63.939 1.2755 63.939 63.482 64.757 0 532 101 9 0 0 0 0.0073711 1 32743 52.725 49.154 1 0.86781 0.74513 0 82881000 44833000 38048000 14400 1485 5491 5623 22454 22454 GTGIVSAPVPK 11 1 0 Unmodified _GTGIVSAPVPK_ 0 0 0 P15880;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;E9PQD7;I3L404;E9PM36;Q9BSW5 P15880 P15880 RPS2;rps2 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.3101 2 513.303124 1024.5917 83466.52 0.092418 4.7438E-05 0.14956 7.677E-05 0.24198 0.00012421 513.303128289356 517.310153752915 64.343 1.2922 64.343 63.894 65.186 0 547 106 9 0 0 0 0.0011047 2 32247 70.056 70.056 1 0.8535 0.72502 0 73495000 39145000 34350000 14401 1485 5491 5623 22455;22456 22455 GTGQSDDSDIWDDTALIK 18 1 0 Unmodified _GTGQSDDSDIWDDTALIK_ 0 0 0 B4DP61;E7EQZ4;Q16637 B4DP61 B4DP61 SMN2;SMN1 Survival motor neuron protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 968.943 2 968.942167 1935.86978 64473.86 0.32028 0.00031033 0.054817 5.3115E-05 0.37509 0.00036344 969.443391369393 973.450532948971 105.23 0.5176 105.23 104.93 105.45 -7.6294E-06 134 40 5 0 0 0 3.2005E-05 2 65137 65.043 60.702 1 1.9109 1.8788 0 9019700 3540300 5479400 14402 1019 5492 5624 22457;22458 22458 GTGQSDDSDIWDDTALIK 18 1 0 Unmodified _GTGQSDDSDIWDDTALIK_ 0 0 0 B4DP61;E7EQZ4;Q16637 B4DP61 B4DP61 SMN2;SMN1 Survival motor neuron protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 972.9493 2 968.942167 1935.86978 65108.05 0.53671 0.00052004 -0.032481 -3.1473E-05 0.50423 0.00048857 968.942044633317 973.450894950183 104.62 0.52724 104.62 104.32 104.85 7.6294E-06 135 40 5 0 0 0 0.0002345 1 66150 47.621 44.434 1 1.6869 1.7655 0 10472000 4195200 6276900 14403 1019 5492 5624 22459 22459 GTGSGLIGASGATMPTDTSK 20 1 0 Oxidation (M) _GTGSGLIGASGATM(ox)PTDTSK_ GTGSGLIGASGATM(1)PTDTSK GTGSGLIGASGATM(69.34)PTDTSK 0 1 0 Q14781 Q14781 Q14781 CBX2 Chromobox protein homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.9362 2 912.93583 1823.85711 65406.18 0.57663 0.00052642 -0.9331 -0.00085186 -0.35647 -0.00032543 914.434858019579 916.943919687063 49.364 0.40468 49.364 49.093 49.497 0 86 27 6 0 0 0 1.0292E-06 2 27047 69.345 60.295 1 0.97715 1.0073 0 12842000 6556200 6285700 14404 1744 5493 5625 22460;22461 22461 1595 GTGVVTSVPSDSPDDIAALR 20 0 1 Unmodified _GTGVVTSVPSDSPDDIAALR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 984.5044 2 978.997276 1955.98 63230.55 0.3459 0.00033863 -0.082656 -8.092E-05 0.26324 0.00025771 979.498653044433 984.001409824142 94.56 0.42296 94.56 94.336 94.759 0 192 39 7 0 0 0 1.3851E-06 2 57323 74.769 66.664 1 1.4788 1.5007 0 28918000 11915000 17003000 14405 883 5494 5626 22462;22463 22462 GTGVVTSVPSDSPDDIAALR 20 0 1 Unmodified _GTGVVTSVPSDSPDDIAALR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 984.0002 2 978.997276 1955.98 62649.87 0.27396 0.00026821 0.027201 2.663E-05 0.30116 0.00029484 979.498774269616 984.50295006844 93.831 0.55321 93.831 93.609 94.163 0 249 47 8 0 0 0 5.7953E-05 2 58154 46.481 46.481 1 1.4216 1.5549 0 34591000 12361000 22229000 14406 883 5494 5626 22464;22465 22464 GTGVVTSVPSDSPDDIAALR 20 0 1 Unmodified _GTGVVTSVPSDSPDDIAALR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 979.4987 2 978.997276 1955.98 62134.58 0.29452 0.00028834 0.22525 0.00022052 0.51977 0.00050886 978.997426491669 984.001348568762 108.01 0.47825 108.01 107.8 108.28 0 139 26 7 0 0 0 4.2242E-06 2 61901 59.294 59.294 1 0.82505 0.71024 0 7422600 4104500 3318200 14407 883 5494 5626 22466;22467 22466 GTGVVTSVPSDSPDDIAALR 20 0 1 Unmodified _GTGVVTSVPSDSPDDIAALR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 979.4969 2 978.997276 1955.98 62940.06 0.2023 0.00019805 0.24271 0.00023761 0.44501 0.00043566 979.498820781795 984.503141297717 107.96 0.5285 107.96 107.74 108.26 0 139 25 8 0 0 0 0.0012773 2 60961 35.118 35.118 1 0.70091 0.58259 0 7599800 4183300 3416500 14408 883 5494 5626 22468;22469 22468 GTHQLYSTSHDR 12 0 1 Unmodified _GTHQLYSTSHDR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.8882 3 467.888373 1400.64329 87952.34 -0.14763 -6.9075E-05 0.063039 2.9495E-05 -0.084592 -3.958E-05 467.888418286549 471.22448525544 15.431 0.51098 15.431 15.239 15.75 0 147 33 9 0 0 0 0.00014515 2 3040 68.83 66.317 1 0.81655 0.82323 0 10529000 5895500 4633400 14409 1389 5495 5627 22470;22471 22470 GTHQLYSTSHDR 12 0 1 Unmodified _GTHQLYSTSHDR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.3329 2 701.328921 1400.64329 73009.45 0.28019 0.00019651 0.47369 0.00033222 0.75389 0.00052872 701.329230079716 706.333248539937 15.456 0.31575 15.456 15.278 15.594 9.5367E-07 65 17 6 0 0 0 0.00039945 1 3052 78.653 73.687 1 0.72592 0.77959 0 3303100 2103300 1199800 14410 1389 5495 5627 22472 22472 GTIEILSDVQLIK 13 1 0 Unmodified _GTIEILSDVQLIK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q53HK9;F8VW21;B4E3D5;Q8NHW5;F8VPE8 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.9266 2 714.919049 1427.82355 72108.48 1.0278 0.00073477 0.18518 0.00013239 1.213 0.00086716 714.919365393031 718.926248200332 118.87 0.71162 118.87 118.55 119.26 0 275 41 9 0 0 0 2.1987E-30 2 76167 170.52 125.66 1 1.0617 1.2609 0 541220000 267990000 273240000 14411 345 5496 5628 22473;22474 22473 GTIEILSDVQLIK 13 1 0 Unmodified _GTIEILSDVQLIK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q53HK9;F8VW21;B4E3D5;Q8NHW5;F8VPE8 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.9197 2 714.919049 1427.82355 72042.69 0.62483 0.00044671 0.09806 7.0105E-05 0.72289 0.00051681 714.919226553899 718.926212524067 118.28 0.83734 118.28 118.04 118.88 0 306 51 9 0 0 0 3.413E-75 2 77697 224.58 159.92 1 1.0614 1.2477 0 362930000 173680000 189250000 14412 345 5496 5628 22475;22476 22476 GTIEILSDVQLIK 13 1 0 Unmodified _GTIEILSDVQLIK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q53HK9;F8VW21;B4E3D5;Q8NHW5;F8VPE8 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.9271 2 714.919049 1427.82355 71452.88 0.71722 0.00051276 0.28689 0.0002051 1.0041 0.00071786 714.919361044579 718.926408852351 131.18 0.8958 131.18 130.95 131.85 -1.5259E-05 235 41 10 0 0 0 7.4727E-09 2 79531 117.67 83.712 1 0.93717 0.80047 0 65992000 32502000 33490000 14413 345 5496 5628 22477;22478 22478 GTILISSEEGETEANNHK 18 1 0 Unmodified _GTILISSEEGETEANNHK_ 0 0 0 B3KMZ6;B2RDF5;Q9UBT2;U3KQ93;B3KNA3;K7ESK7 B3KMZ6 B3KMZ6 UBA2 SUMO-activating enzyme subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.3156 3 643.644714 1927.91231 NaN NaN NaN -1.0868 -0.0006995 NaN NaN NaN NaN 44.394 0.29326 44.394 44.231 44.524 3.8147E-06 0 0 0 0.0012331 1 23855 48.053 32.169 1 NaN NaN 0 7953900 0 7953900 14414 887 5497 5629 22479 22479 GTIQVITQGTSLK 13 1 0 Unmodified _GTIQVITQGTSLK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.3953 2 673.387916 1344.76128 74825.04 0.72324 0.00048702 -0.12662 -8.5266E-05 0.59662 0.00040176 673.387567115206 677.394937577103 75.653 0.71721 75.653 75.282 75.999 0 320 61 7 0 0 0 4.974E-05 2 44335 96.756 96.756 1 3.1092 3.4979 0 71943000 17952000 53990000 14415 1382 5498 5630 22480;22481 22480 GTIQVITQGTSLK 13 1 0 Unmodified _GTIQVITQGTSLK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3879 2 673.387916 1344.76128 74634.34 0.70117 0.00047216 -0.28074 -0.00018905 0.42043 0.00028311 673.387421936691 677.394840758541 74.583 0.75959 74.583 74.129 74.888 0 329 66 7 0 0 0 7.3664E-05 2 44769 94.767 94.767 1 3.0665 3.4563 0 124600000 26683000 97913000 14416 1382 5498 5630 22482;22483 22483 GTIQVITQGTSLK 13 1 0 Unmodified _GTIQVITQGTSLK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 677.3954 2 673.387916 1344.76128 74893.83 0.51196 0.00034475 0.0090962 6.1253E-06 0.52106 0.00035087 673.387488213505 677.395056648002 86.658 0.70934 86.658 86.306 87.016 0 211 43 7 0 0 0 0.003053 2 47553 51.252 51.252 1 2.0087 1.6073 0 8729000 2739900 5989100 14417 1382 5498 5630 22484;22485 22484 GTIQVITQGTSLK 13 1 0 Unmodified _GTIQVITQGTSLK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.395 2 673.387916 1344.76128 74575.79 0.57506 0.00038724 -0.064665 -4.3545E-05 0.51039 0.00034369 673.387401523292 677.39507801878 86.741 0.6917 86.741 86.395 87.086 7.6294E-06 222 45 6 0 0 0 0.00012623 2 46786 78.488 78.488 1 1.9188 1.5657 0 6215500 1981700 4233800 14418 1382 5498 5630 22486;22487 22486 GTLDPVEK 8 1 0 Unmodified _GTLDPVEK_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 429.7325 2 429.732 857.449448 91473.06 -0.18774 -8.0679E-05 0.19639 8.4397E-05 0.0086513 3.7178E-06 429.73213092152 433.738957273123 30.73 0.37851 30.73 30.551 30.93 -1.9073E-06 202 33 9 0 0 0 0.0092533 2 15051 75.109 56.296 1 1.2537 1.4367 0 192100000 86539000 105560000 14419 1467;1248 5499 5631 22488;22489 22489 GTLDPVEK 8 1 0 Unmodified _GTLDPVEK_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.7394 2 429.732 857.449448 90706.91 -0.34675 -0.00014901 0.17882 7.6846E-05 -0.16793 -7.2163E-05 429.732217337565 433.739013445735 30.183 0.3677 30.183 29.985 30.353 1.9073E-06 167 30 8 0 0 0 0.0099928 2 14658 73.26 54.484 1 1.3011 1.5107 0 225930000 103700000 122230000 14420 1467;1248 5499 5631 22490;22491 22490 GTLDPVEK 8 1 0 Unmodified _GTLDPVEK_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 433.739 2 429.732 857.449448 92048.3 -0.18009 -7.7392E-05 0.12179 5.2337E-05 -0.058303 -2.5055E-05 429.732168231026 433.739052778565 34.421 0.50189 34.421 34.257 34.759 0 144 36 6 0 0 0 0.0092293 2 14689 75.213 55.576 1 1.4674 1.1785 0 15146000 5907900 9237800 14421 1467;1248 5499 5631 22492;22493 22492 GTLEQWIEK 9 1 0 Unmodified _GTLEQWIEK_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4;Q6PK38 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.2901 2 552.290214 1102.56587 83640.16 0.70576 0.00038979 -0.079483 -4.3898E-05 0.62628 0.00034589 552.290395402142 556.297236229147 80.615 0.51089 80.615 80.361 80.872 -7.6294E-06 154 43 5 0 0 0 0.036483 1 47840 43.442 22.817 1 1.3234 1.3816 0 11813000 5540100 6272800 14422 1111 5500 5632 22494 22494 GTLEQWIEK 9 1 0 Unmodified _GTLEQWIEK_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4;Q6PK38 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.2902 2 552.290214 1102.56587 83203.91 0.82356 0.00045485 -0.66373 -0.00036657 0.15983 8.8272E-05 552.290050418349 556.297041972741 79.464 0.47496 79.464 79.254 79.729 0 159 38 6 0 0 0 0.013268 1 48211 56.729 30.345 1 0.99978 1.0008 0 13970000 5770200 8199900 14423 1111 5500 5632 22495 22495 GTLITHCYK 9 1 0 Unmodified _GTLITHCYK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.7794 2 546.778959 1091.54336 81569.19 0.41475 0.00022678 -0.65232 -0.00035667 -0.23757 -0.0001299 546.77863344346 550.785826000572 24.975 0.37959 24.975 24.708 25.088 0 85 20 8 0 0 0 0.0021874 1 10656 90.135 65.241 1 0.67946 0.75629 0 60971000 37536000 23435000 14424 897 5501 5633 22496 22496 GTLITHCYK 9 1 0 Unmodified _GTLITHCYK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.7809 2 546.778959 1091.54336 79215.52 0.46668 0.00025517 -0.43135 -0.00023585 0.035322 1.9313E-05 546.778672947895 550.785735686682 24.587 0.57915 24.587 24.384 24.963 0 91 27 6 0 0 0 0.00069605 1 10262 111.82 84.334 1 0.83381 0.92039 0 44188000 24034000 20153000 14425 897 5501 5633 22497 22497 GTLITHCYK 9 1 0 Unmodified _GTLITHCYK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.7861 2 546.778959 1091.54336 79621.13 0.51025 0.00027899 -0.063555 -3.4751E-05 0.4467 0.00024424 546.778846647386 550.786154265295 27.613 0.45561 27.613 27.423 27.879 0 71 16 8 0 0 0 0.002124 2 10801 76.478 67.084 1 1.2342 0.97624 0 10517000 4696700 5819900 14426 897 5501 5633 22498;22499 22498 GTLITHCYK 9 1 0 Unmodified _GTLITHCYK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.7861 2 546.778959 1091.54336 79985.39 0.2074 0.0001134 -0.33667 -0.00018408 -0.12927 -7.068E-05 546.778838494091 550.78593387497 27.551 0.56636 27.551 27.346 27.913 0 87 23 8 0 0 0 0.0034059 2 10215 71.877 71.877 1 1.2127 0.99528 0 9126800 3810900 5315900 14427 897 5501 5633 22500;22501 22500 GTLSGWILSK 10 1 0 Unmodified _GTLSGWILSK_ 0 0 0 P27824;H0Y9Q7;Q16094;D6RB85;D6RDP7;D6RAQ8;D6RAU8 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.3029 2 531.303124 1060.5917 86082.27 0.50456 0.00026807 -0.22004 -0.00011691 0.28452 0.00015117 531.303039441966 535.309936875374 94.424 0.60452 94.424 94.155 94.759 0 172 55 4 0 0 0 0.027593 2 57269 43.77 28.619 1 0.83103 0.84305 0 18163000 8383600 9779000 14428 1526 5502 5634 22502;22503 22502 GTMTEIYNDLSK 12 1 0 Oxidation (M) _GTM(ox)TEIYNDLSK_ GTM(1)TEIYNDLSK GTM(42)TEIYNDLSK 0 1 0 H7C4X9;A0A087WYS3;Q9ULU4 H7C4X9 H7C4X9 ZMYND8 Protein kinase C-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.3325 2 694.324125 1386.6337 NaN NaN NaN 2.5422 0.0017651 NaN NaN NaN NaN 55.882 0.19992 55.882 55.734 55.934 0 0 0 0 0.015041 1 32083 42.001 33.088 1 NaN NaN 0 3155900 0 3155900 14429 1317 5503 5635 22504 22504 998 GTNIQENEYVK 11 1 0 Unmodified _GTNIQENEYVK_ 0 0 0 B3KPC1;A0A024QZR3;Q9BRX2 B3KPC1 B3KPC1 hCG_2002731;PELO Protein pelota homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8181 2 647.817324 1293.62009 NaN NaN NaN -0.079754 -5.1666E-05 NaN NaN NaN NaN 35.478 0.17093 35.478 35.401 35.572 0 0 0 0 1.3018E-08 1 17848 116.52 61.91 1 NaN NaN 0 3267600 3267600 0 14430 26 5504 5636 22505 22505 GTNIQENEYVK 11 1 0 Unmodified _GTNIQENEYVK_ 0 0 0 B3KPC1;A0A024QZR3;Q9BRX2 B3KPC1 B3KPC1 hCG_2002731;PELO Protein pelota homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.825 2 647.817324 1293.62009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.442 1 35.442 34.942 35.942 0 0 0 0 3.9304E-05 1 17821 85.355 50.968 1 14431 26 5504 5636 22506 22506 GTNIQENEYVK 11 1 0 Unmodified _GTNIQENEYVK_ 0 0 0 B3KPC1;A0A024QZR3;Q9BRX2 B3KPC1 B3KPC1 hCG_2002731;PELO Protein pelota homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8248 2 647.817324 1293.62009 NaN NaN NaN -0.96646 -0.00062609 NaN NaN NaN NaN 34.781 0.44838 34.781 34.54 34.988 0 0 0 0 0.0028738 1 17614 70.399 47.079 1 NaN NaN 0 8112800 0 8112800 14432 26 5504 5636 22507 22507 GTNIQENEYVK 11 1 0 Unmodified _GTNIQENEYVK_ 0 0 0 B3KPC1;A0A024QZR3;Q9BRX2 B3KPC1 B3KPC1 hCG_2002731;PELO Protein pelota homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.8171 2 647.817324 1293.62009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.891 1 34.891 34.391 35.391 -3.8147E-06 0 0 0 0.00030701 1 17715 78.556 43.015 1 14433 26 5504 5636 22508 22508 GTNTSSPYDAGADYLR 16 0 1 Unmodified _GTNTSSPYDAGADYLR_ 0 0 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.8881 2 844.381548 1686.74854 NaN NaN NaN 0.10998 9.2865E-05 NaN NaN NaN NaN 67.57 0.38263 67.57 67.352 67.735 0 0 0 0 0.010855 1 38973 47.189 36.957 1 NaN NaN 0 4712000 0 4712000 14434 1924 5505 5637 22509 22509 GTNTSSPYDAGADYLR 16 0 1 Unmodified _GTNTSSPYDAGADYLR_ 0 0 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.3862 2 844.381548 1686.74854 68927.07 0.55107 0.00046532 -0.07405 -6.2526E-05 0.47702 0.00040279 844.381355292319 849.385398789382 77.849 0.58105 77.849 77.566 78.147 -7.6294E-06 195 37 7 0 0 0 0.00043634 1 41698 49.483 49.483 1 2.9147 2.4442 0 4118400 1089900 3028500 14435 1924 5505 5637 22510 22510 GTNTSSPYDAGADYLR 16 0 1 Unmodified _GTNTSSPYDAGADYLR_ 0 0 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 849.8879 2 844.381548 1686.74854 67765.34 0.63351 0.00053492 -0.23214 -0.00019602 0.40137 0.00033891 844.381203129318 849.38529186058 78.255 0.53862 78.255 77.968 78.506 0 179 34 7 0 0 0 0.027662 1 41046 24.935 24.935 1 2.7889 2.4664 0 4017400 1078800 2938600 14436 1924 5505 5637 22511 22511 GTPAGTTPGASQAPK 15 1 0 Unmodified _GTPAGTTPGASQAPK_ 0 0 0 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.8512 2 670.843873 1339.67319 75881.22 0.46435 0.00031151 0.5005 0.00033576 0.96486 0.00064727 670.843922423179 674.851300619952 20.954 0.28376 20.954 20.792 21.075 -1.9073E-06 37 13 4 0 0 0 0.00025347 1 7340 61.435 61.435 1 0.96192 0.97109 0 5526100 2665200 2860900 14437 1892 5506 5638 22512 22512 GTPAGTTPGASQAPK 15 1 0 Unmodified _GTPAGTTPGASQAPK_ 0 0 0 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.852 2 670.843873 1339.67319 76050.21 0.36018 0.00024163 0.81145 0.00054436 1.1716 0.00078598 670.844358686444 674.851304353583 20.892 0.3094 20.892 20.721 21.031 -1.9073E-06 38 12 5 0 0 0 0.00022059 2 7140 64.64 64.64 1 0.97843 0.97192 0 6133800 3683700 2450100 14438 1892 5506 5638 22513;22514 22513 GTQCVEQIQELVLR 14 0 1 Unmodified _GTQCVEQIQELVLR_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 841.9432 2 836.937979 1671.8614 NaN NaN NaN -1.2321 -0.0010312 NaN NaN NaN NaN 117.49 0.40826 117.49 117.29 117.7 -7.6294E-06 0 0 0 0.0012871 1 69224 72.34 63.382 1 NaN NaN 0 2336900 0 2336900 14439 2094 5507 5639 22515 22515 GTQCVEQIQELVLR 14 0 1 Unmodified _GTQCVEQIQELVLR_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 842.4423 2 836.937979 1671.8614 NaN NaN NaN -1.327 -0.0011107 NaN NaN NaN NaN 117.36 0.37207 117.36 117.15 117.52 0 0 0 0 0.0014801 1 68176 70.728 55.157 1 NaN NaN 0 2396100 0 2396100 14440 2094 5507 5639 22516 22516 GTQGAEEVLR 10 0 1 Unmodified _GTQGAEEVLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2789 2 530.275095 1058.53564 82873.65 0.4764 0.00025263 -0.3357 -0.00017801 0.14071 7.4613E-05 530.275160075111 535.278887093759 32.503 0.43999 32.503 32.249 32.689 0 127 37 6 0 0 0 0.0003605 1 16086 88.819 53.524 1 1.258 1.3025 0 23128000 8379900 14748000 14441 1754 5508 5640 22517 22517 GTQGAEEVLR 10 0 1 Unmodified _GTQGAEEVLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.2753 2 530.275095 1058.53564 81469.51 0.98345 0.0005215 -0.05292 -2.8062E-05 0.93053 0.00049344 530.275088087474 535.279137971057 31.671 0.42712 31.671 31.462 31.889 0 99 38 5 0 0 0 0.00018094 1 15697 94.692 55.729 1 1.2702 1.3772 0 27742000 10989000 16753000 14442 1754 5508 5640 22518 22518 GTQGATAGASSELDASK 17 1 0 Unmodified _GTQGATAGASSELDASK_ 0 0 0 V9HWK0;O76094 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.8754 2 775.868273 1549.72199 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.343 1 27.343 26.843 27.843 0 0 0 0 0.00042672 1 12580 67.115 51.225 1 14443 1416 5509 5641 22519 22519 GTQGATAGASSELDASK 17 1 0 Unmodified _GTQGATAGASSELDASK_ 0 0 0 V9HWK0;O76094 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.876 2 775.868273 1549.72199 NaN NaN NaN -0.0080811 -6.2699E-06 NaN NaN NaN NaN 26.962 0.23758 26.962 26.822 27.059 0 0 0 0 8.5318E-07 1 12310 85.45 71.215 1 NaN NaN 0 2699500 0 2699500 14444 1416 5509 5641 22520 22520 GTQGATAGASSELDASK 17 1 0 Unmodified _GTQGATAGASSELDASK_ 0 0 0 V9HWK0;O76094 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.8691 2 775.868273 1549.72199 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.911 1 26.911 26.411 27.411 1.9073E-06 0 0 0 0.00056403 1 12276 58.508 43.536 1 14445 1416 5509 5641 22521 22521 GTQGVVTNFEIFR 13 0 1 Unmodified _GTQGVVTNFEIFR_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q59FS8 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.8883 2 734.383165 1466.75178 72125.27 0.65305 0.00047959 -0.071219 -5.2302E-05 0.58183 0.00042728 734.383490872357 739.387345112903 117.34 0.49612 117.34 117.08 117.58 0 69 22 5 0 0 0 0.013457 1 68146 38.27 32.167 1 1.0941 0.92918 0 3107200 1405300 1701900 14446 241 5510 5642 22522 22522 GTQLLSSGSDGLVK 14 1 0 Unmodified _GTQLLSSGSDGLVK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3684 2 681.367181 1360.71981 NaN NaN NaN 0.2432 0.00016571 NaN NaN NaN NaN 69.78 1.0328 69.78 69.363 70.395 0 0 0 0 1.6401E-42 2 41432 165.7 136.22 1 NaN NaN 0 44576000 44576000 0 14447 1698;436 5511 5643 22523;22524 22523 GTQLLSSGSDGLVK 14 1 0 Unmodified _GTQLLSSGSDGLVK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3677 2 681.367181 1360.71981 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.344 1 69.344 68.844 69.844 7.6294E-06 0 0 0 0.016875 1 41278 45.915 19.977 1 14448 1698;436 5511 5643 22525 22525 GTQLLSSGSDGLVK 14 1 0 Unmodified _GTQLLSSGSDGLVK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.868 2 681.367181 1360.71981 73370.55 0.56157 0.00038264 0.074136 5.0514E-05 0.63571 0.00043315 681.367150218895 685.374337653329 81.389 1.0267 81.389 80.906 81.933 0 405 62 9 0 0 0 0.011731 2 43887 36.284 36.284 1 1.2967 1.0607 0 34700000 15633000 19067000 14449 1698;436 5511 5643 22526;22527 22527 GTQLLSSGSDGLVK 14 1 0 Unmodified _GTQLLSSGSDGLVK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.3668 2 681.367181 1360.71981 73447.68 0.63327 0.00043149 0.064871 4.4201E-05 0.69815 0.00047569 681.367114675362 685.374251153919 81.559 1.3504 81.559 80.843 82.194 -7.6294E-06 361 59 9 0 0 0 0.0055956 2 43147 43.501 43.501 1 1.3015 1.0602 0 25614000 11396000 14217000 14450 1698;436 5511 5643 22528;22529 22529 GTQTYSVLEGDPSENYSK 18 1 0 Unmodified _GTQTYSVLEGDPSENYSK_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 988.4512 2 987.949992 1973.88543 62430.37 0.27399 0.00027069 0.28164 0.00027825 0.55563 0.00054894 988.45170005416 992.458902948306 68.198 0.42349 68.198 68.014 68.438 7.6294E-06 92 37 4 0 0 0 3.0515E-05 3 39455 66.004 64.65 1 0.78681 0.79153 0 9962200 5107100 4855100 14451 1601 5512 5644 22530;22531;22532 22530 GTQTYSVLEGDPSENYSK 18 1 0 Unmodified _GTQTYSVLEGDPSENYSK_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 991.9574 2 987.949992 1973.88543 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.048 1 68.048 67.548 68.548 -7.6294E-06 0 0 0 0.0053657 1 39412 49.31 40.121 1 14452 1601 5512 5644 22533 22533 GTQTYSVLEGDPSENYSK 18 1 0 Unmodified _GTQTYSVLEGDPSENYSK_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 988.4519 2 987.949992 1973.88543 61711.38 0.39441 0.00038966 0.043688 4.3161E-05 0.4381 0.00043282 987.949788161075 991.957197000865 67.3 0.52228 67.3 67.001 67.523 0 128 42 4 0 0 0 7.7282E-08 3 39818 92.039 92.039 1 0.96951 1.0157 0 10694000 5546300 5148000 14453 1601 5512 5644 22534;22535;22536 22535 GTQVYSPEK 9 1 0 Unmodified _GTQVYSPEK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.7534 2 504.753464 1007.49238 86610.34 0.47609 0.00024031 0.18421 9.298E-05 0.6603 0.00033329 504.753414515408 508.760297953536 22.279 0.35659 22.279 22.121 22.478 0 101 21 8 0 0 0 0.00033401 2 8414 101.72 94.154 1 0.95539 0.97308 0 17954000 9456200 8498200 14454 1411 5513 5645 22537;22538 22538 GTQYSLCIFR 10 0 1 Unmodified _GTQYSLCIFR_ 0 0 0 Q9H5I1;C9IYH9 Q9H5I1 Q9H5I1 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.8135 2 622.808248 1243.60194 79083.7 0.61695 0.00038424 -0.54909 -0.00034198 0.067857 4.2262E-05 622.806842247826 627.812384328509 105.79 0.45123 105.79 105.6 106.05 7.6294E-06 80 27 4 0 0 0 0.015104 2 59466 48.794 48.794 1 2.1084 1.7947 0 2947000 787340 2159600 14455 2036 5514 5646 22539;22540 22539 GTSFDAAATSGGSASSEK 18 1 0 Unmodified _GTSFDAAATSGGSASSEK_ 0 0 0 A0A0S2Z3L0;P13804;A0A0S2Z3M4;H0YL12;H0YKF0;H0YLU7;H0YK49;H0YNX6 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.8638 2 815.863188 1629.71182 NaN NaN NaN 0.027234 2.222E-05 NaN NaN NaN NaN 29.022 0.2037 29.022 28.883 29.086 0 0 0 0 6.2373E-25 2 13904 170.95 161 1 NaN NaN 0 13632000 13632000 0 14456 553 5515 5647 22541;22542 22542 GTSFDAAATSGGSASSEK 18 1 0 Unmodified _GTSFDAAATSGGSASSEK_ 0 0 0 A0A0S2Z3L0;P13804;A0A0S2Z3M4;H0YL12;H0YKF0;H0YLU7;H0YK49;H0YNX6 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.8708 2 815.863188 1629.71182 67859.91 0.72631 0.00059257 0.12813 0.00010454 0.85444 0.00069711 815.863200866115 819.870337560133 28.192 0.26644 28.192 28.095 28.361 0 38 11 7 0 0 0 5.3493E-140 2 13382 242.4 242.4 1 3.7373 4.1861 0 54300000 11479000 42821000 14457 553 5515 5647 22543;22544 22543 GTSFDAAATSGGSASSEK 18 1 0 Unmodified _GTSFDAAATSGGSASSEK_ 0 0 0 A0A0S2Z3L0;P13804;A0A0S2Z3M4;H0YL12;H0YKF0;H0YLU7;H0YK49;H0YNX6 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.8707 2 815.863188 1629.71182 68064.65 0.43188 0.00035235 0.022273 1.8171E-05 0.45415 0.00037052 815.862864888144 819.87060684322 32.891 0.47464 32.891 32.796 33.271 0 75 33 5 0 0 0 2.3741E-05 2 14316 70.373 70.373 1 2.0974 1.6607 0 4958100 1061300 3896800 14458 553 5515 5647 22545;22546 22545 GTSYQSPHGIPIDLLDR 17 0 1 Unmodified _GTSYQSPHGIPIDLLDR_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 623.9892 3 623.654885 1867.94283 76396.76 0.67619 0.00042171 -0.14998 -9.3533E-05 0.52621 0.00032817 623.654745768947 626.990913166214 109.5 0.751 109.5 109.07 109.82 0 201 37 10 0 0 0 3.9287E-05 1 63023 57.173 57.173 1 1.1405 0.95414 0 24431000 11519000 12912000 14459 2120 5516 5648 22547 22547 GTSYQSPHGIPIDLLDR 17 0 1 Unmodified _GTSYQSPHGIPIDLLDR_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.3254 3 623.654885 1867.94283 76733.63 0.66751 0.0004163 -0.34042 -0.00021231 0.32709 0.00020399 623.988972416989 626.990768703533 109.32 0.63789 109.32 108.95 109.59 -7.6294E-06 164 28 10 0 0 0 2.3578E-05 2 62004 64.507 64.507 1 1.1702 1.0017 0 20709000 9588000 11121000 14460 2120 5516 5648 22548;22549 22549 GTTAPGPIHLLELCDQK 17 1 0 Acetyl (Protein N-term) _(ac)GTTAPGPIHLLELCDQK_ 1 0 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.4857 2 946.48275 1890.95095 61666.74 0.71112 0.00067306 0.32953 0.00031189 1.0406 0.00098495 946.483833381975 950.489673575485 112.57 0.80487 112.57 112.16 112.97 0 428 58 12 0 0 0 6.3888E-09 1 70946 105.95 105.95 1 0.89346 1.0189 0 175270000 91447000 83819000 14461 2059 5517 5649 22550 22550 GTTAPGPIHLLELCDQK 17 1 0 Acetyl (Protein N-term) _(ac)GTTAPGPIHLLELCDQK_ 1 0 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 946.4837 2 946.48275 1890.95095 61759.19 0.92693 0.00087732 0.17427 0.00016495 1.1012 0.0010423 946.483738884116 950.489569221044 112.02 0.66187 112.02 111.69 112.35 -7.6294E-06 413 49 12 0 0 0 1.0578E-08 3 72253 101.53 101.53 1 0.91796 1.0525 0 166230000 83116000 83118000 14462 2059 5517 5649 22551;22552;22553 22552 GTTAPGPIHLLELCDQK 17 1 0 Acetyl (Protein N-term) _(ac)GTTAPGPIHLLELCDQK_ 1 0 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 946.9865 2 946.48275 1890.95095 61204.44 0.77824 0.0007366 -0.43522 -0.00041193 0.34302 0.00032466 946.98421711585 950.48953389203 123.64 0.98743 123.64 123.33 124.31 7.6294E-06 288 40 12 0 0 0 5.2125E-07 2 73828 97.273 97.273 1 1.7251 1.5026 0 154520000 59069000 95451000 14463 2059 5517 5649 22554;22555 22555 GTTAPGPIHLLELCDQK 17 1 0 Acetyl (Protein N-term) _(ac)GTTAPGPIHLLELCDQK_ 1 0 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 946.4835 2 946.48275 1890.95095 61197.45 0.72543 0.00068661 -0.48916 -0.00046298 0.23627 0.00022363 946.984181583402 950.489584678791 123.5 1.0614 123.5 123.19 124.26 0 280 42 12 0 0 0 6.3844E-06 2 72792 86.944 86.944 1 1.7601 1.514 0 163650000 59221000 104430000 14464 2059 5517 5649 22556;22557 22557 GTVEEEIIER 10 0 1 Unmodified _GTVEEEIIER_ 0 0 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5;A0A0D9SF92 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.8011 2 587.801143 1173.58773 NaN NaN NaN 0.64844 0.00038115 NaN NaN NaN NaN 59.368 0.34095 59.368 59.151 59.492 0 0 0 0 1.8581E-05 1 33779 104.01 34.386 1 NaN NaN 0 14409000 14409000 0 14465 354 5518 5650 22558 22558 GTVEEEIIER 10 0 1 Unmodified _GTVEEEIIER_ 0 0 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5;A0A0D9SF92 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8018 2 587.801143 1173.58773 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.229 1 58.229 57.729 58.729 -3.8147E-06 0 0 0 2.6099E-08 1 33811 113.71 32.159 1 14466 354 5518 5650 22559 22559 GTVEEEIIER 10 0 1 Unmodified _GTVEEEIIER_ 0 0 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5;A0A0D9SF92 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.8011 2 587.801143 1173.58773 79615.56 0.40577 0.00023851 0.52009 0.00030571 0.92586 0.00054422 587.800994276164 592.80505005339 69.072 0.33913 69.072 68.927 69.266 0 75 21 5 0 0 0 0.040069 1 36172 38.75 28.969 1 1.1641 0.9878 0 5144200 2164200 2980000 14467 354 5518 5650 22560 22560 GTVEEEIIER 10 0 1 Unmodified _GTVEEEIIER_ 0 0 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5;A0A0D9SF92 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.8056 2 587.801143 1173.58773 79644.88 0.52046 0.00030593 0.29504 0.00017343 0.8155 0.00047935 587.800777892366 592.805177322751 69.619 0.34698 69.619 69.474 69.821 0 77 23 4 0 0 0 0.028741 2 35758 43.308 42.395 1 1.3532 1.1883 0 3603500 1413200 2190300 14468 354 5518 5650 22561;22562 22562 GTVEGFEPADNK 12 1 0 Unmodified _GTVEGFEPADNK_ 0 0 0 P37108;H0YLA2 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.7975 2 632.296224 1262.5779 77705.34 0.50343 0.00031832 0.29253 0.00018496 0.79596 0.00050328 632.296612937599 636.804641158181 39.621 0.53523 39.621 39.271 39.807 0 113 45 5 0 0 0 0.015044 2 20424 43.168 37.948 1 0.55748 0.57638 0 11082000 6411200 4670800 14469 1549 5519 5651 22563;22564 22563 GTVEGFEPADNK 12 1 0 Unmodified _GTVEGFEPADNK_ 0 0 0 P37108;H0YLA2 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3033 2 632.296224 1262.5779 77901.32 0.65864 0.00041646 0.74389 0.00047036 1.4025 0.00088681 632.296555671055 636.304076150529 38.55 0.43262 38.55 38.316 38.748 0 142 37 6 0 0 0 0.00018714 1 20306 76.143 68.217 1 0.63618 0.68827 0 22009000 13066000 8943900 14470 1549 5519 5651 22565 22565 GTVEPQLEAR 10 0 1 Unmodified _GTVEPQLEAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.296 2 550.290745 1098.56694 81166.13 0.737 0.00040556 -0.095796 -5.2715E-05 0.6412 0.00035285 550.290292442952 555.294834002376 38.393 0.61466 38.393 38.065 38.68 3.8147E-06 211 52 6 0 0 0 1.137E-05 2 19589 104.2 81.46 1 1.8565 1.9683 0 41757000 15427000 26330000 14471 1504 5520 5652 22566;22567 22566 GTVEPQLEAR 10 0 1 Unmodified _GTVEPQLEAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.2895 2 550.290745 1098.56694 80762.09 0.39657 0.00021823 0.56684 0.00031193 0.96341 0.00053015 550.290391265147 555.295236415048 37.473 0.4802 37.473 37.238 37.718 0 196 40 7 0 0 0 0.0029037 1 19422 66.962 51.347 1 1.672 1.928 0 72160000 20759000 51401000 14472 1504 5520 5652 22568 22568 GTVGSILDR 9 0 1 Unmodified _GTVGSILDR_ 0 0 0 P61221;D6R9I9;H0Y990;D6RGF4 P61221 P61221 ABCE1 ATP-binding cassette sub-family E member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2601 2 459.256174 916.497795 NaN NaN NaN 0.50151 0.00023032 NaN NaN NaN NaN 51.408 0.17542 51.408 51.327 51.502 0 0 0 0 0.051976 1 29161 46.39 22.418 1 NaN NaN 0 6701000 0 6701000 14473 1628 5521 5653 22569 22569 GTVIEVNVSELGLVTQGGK 19 1 0 Unmodified _GTVIEVNVSELGLVTQGGK_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 955.0326 2 950.52293 1899.03131 63430.9 1.0309 0.00097987 0.6945 0.00066013 1.7254 0.00164 951.025429099638 954.52997668887 128.46 0.46075 128.46 128.14 128.6 0 116 19 10 0 0 0 5.6419E-12 2 77496 104.55 104.55 1 1.0516 0.84905 0 22699000 10690000 12010000 14474 1427 5522 5654 22570;22571 22570 GTVIVQPEPVLNEDK 15 1 0 Unmodified _GTVIVQPEPVLNEDK_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNN3;Q5H9A3;A0A087WWG0;A0A096LNL6 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.9516 2 819.440877 1636.8672 68569.27 0.51164 0.00041926 0.061622 5.0496E-05 0.57326 0.00046976 819.942430772742 823.447915578055 81.183 0.44881 81.183 80.969 81.418 0 199 37 7 0 0 0 2.788E-08 2 48271 112.13 112.13 1 0.9299 0.97811 0 30586000 17117000 13468000 14475 672 5523 5655 22572;22573 22572 GTVIVQPEPVLNEDK 15 1 0 Unmodified _GTVIVQPEPVLNEDK_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNN3;Q5H9A3;A0A087WWG0;A0A096LNL6 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.448 2 819.440877 1636.8672 67340.8 0.79195 0.00064895 -0.26985 -0.00022113 0.5221 0.00042783 819.942200390082 823.447608817225 80.203 0.43777 80.203 80.004 80.442 0 171 34 6 0 0 0 1.4539E-07 3 48769 109.72 109.72 1 0.8754 0.9557 0 40230000 23582000 16648000 14476 672 5523 5655 22574;22575;22576 22575 GTVIVQPEPVLNEDK 15 1 0 Unmodified _GTVIVQPEPVLNEDK_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNN3;Q5H9A3;A0A087WWG0;A0A096LNL6 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 823.9495 2 819.440877 1636.8672 70630.3 0.73569 0.00060285 -0.28614 -0.00023447 0.44955 0.00036838 819.942296153699 823.44762137941 92.854 0.45897 92.854 92.649 93.108 0 133 28 6 0 0 0 0.00021979 1 51735 63.408 63.408 1 1.42 1.1063 0 3742200 1399700 2342500 14477 672 5523 5655 22577 22577 GTVLDQVPINPSLYLVK 17 1 0 Unmodified _GTVLDQVPINPSLYLVK_ 0 0 0 Q5JZB8;A0A024R9Y9;A0A024R9W1;Q9BPZ2;Q99865 Q5JZB8 Q5JZB8 SPIN2B;SPIN-2;SPIN2;SPIN2A Spindlin-2B;Spindlin-2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 932.5357 2 928.530027 1855.0455 66698.8 0.97355 0.00090397 -0.39761 -0.00036919 0.57595 0.00053478 928.529917568957 932.537048978585 124.72 0.31694 124.72 124.54 124.86 0 70 21 5 0 0 0 0.013457 2 81003 29.544 6.5741 1 1.0761 1.0937 0 4577700 2165400 2412400 14478 290 5524 5656 22578;22579 22578 GTVLDQVPINPSLYLVK 17 1 0 Unmodified _GTVLDQVPINPSLYLVK_ 0 0 0 Q5JZB8;A0A024R9Y9;A0A024R9W1;Q9BPZ2;Q99865 Q5JZB8 Q5JZB8 SPIN2B;SPIN-2;SPIN2;SPIN2A Spindlin-2B;Spindlin-2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 932.5364 2 928.530027 1855.0455 67593.88 0.85588 0.00079471 0.13315 0.00012363 0.98903 0.00091834 929.03160762946 932.537271531922 124.37 0.2983 124.37 124.21 124.5 0 64 18 5 0 0 0 0.0011587 1 82710 42.809 13.266 1 1.1757 1.1765 0 5601900 2815700 2786200 14479 290 5524 5656 22580 22580 GTVLLADNVICPGAPDFLAHVR 22 0 1 Unmodified _GTVLLADNVICPGAPDFLAHVR_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.7496 3 779.079088 2334.21544 67500.2 1.0185 0.00079348 -0.15892 -0.00012381 0.85957 0.00066967 779.747206093475 782.749185288232 118.6 0.59978 118.6 118.3 118.9 0 138 34 6 0 0 0 4.4727E-09 1 76090 76.186 76.186 1 1.6421 1.6702 0 27475000 6768500 20706000 14480 601 5525 5657 22581 22581 GTVLLADNVICPGAPDFLAHVR 22 0 1 Unmodified _GTVLLADNVICPGAPDFLAHVR_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.7502 3 779.079088 2334.21544 NaN NaN NaN 0.011794 9.1882E-06 NaN NaN NaN NaN 118.02 0.4878 118.02 117.81 118.3 -7.6294E-06 0 0 0 1.3346E-09 1 77528 77.287 72.029 1 NaN NaN 0 27042000 0 27042000 14481 601 5525 5657 22582 22582 GTVLLADNVICPGAPDFLAHVR 22 0 1 Unmodified _GTVLLADNVICPGAPDFLAHVR_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 782.4167 3 779.079088 2334.21544 NaN NaN NaN -0.052936 -4.1241E-05 NaN NaN NaN NaN 130.4 0.367 130.4 130.25 130.62 0 0 0 0 0.0029618 1 78984 35.195 32.142 1 NaN NaN 0 6265300 0 6265300 14482 601 5525 5657 22583 22583 GTVLLADNVICPGAPDFLAHVR 22 0 1 Unmodified _GTVLLADNVICPGAPDFLAHVR_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 782.7501 3 779.079088 2334.21544 NaN NaN NaN -0.097721 -7.6133E-05 NaN NaN NaN NaN 130.21 0.38867 130.21 129.98 130.36 0 0 0 0 0.047904 1 77913 22.409 19.171 1 NaN NaN 0 5661700 0 5661700 14483 601 5525 5657 22584 22584 GTVVTGTLER 10 0 1 Unmodified _GTVVTGTLER_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.788 2 516.787838 1031.56112 83811.29 0.33739 0.00017436 0.26324 0.00013604 0.60063 0.0003104 516.787961881105 521.792054305316 40.106 0.61461 40.106 39.775 40.39 0 258 50 8 0 0 0 1.4773E-05 1 20858 101.65 73.822 1 1.7475 2.0351 0 188200000 67825000 120380000 14484 1580 5526 5658 22585 22585 GTVVTGTLER 10 0 1 Unmodified _GTVVTGTLER_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.7921 2 516.787838 1031.56112 84316.66 0.37649 0.00019457 0.072802 3.7623E-05 0.44929 0.00023219 516.787954570302 521.791942727062 39.107 0.72248 39.107 38.725 39.447 0 257 62 8 0 0 0 1.2687E-08 2 20655 123.35 103.58 1 1.8062 2.0821 0 228310000 75249000 153060000 14485 1580 5526 5658 22586;22587 22587 GTVVTGTLER 10 0 1 Unmodified _GTVVTGTLER_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.7924 2 516.787838 1031.56112 83842.85 0.24414 0.00012617 -0.12164 -6.2863E-05 0.1225 6.3307E-05 516.787784210537 521.791917596653 45.575 0.5658 45.575 45.348 45.914 0 208 42 6 0 0 0 0.0025324 2 21806 68.657 57.297 1 1.3974 1.1977 0 8593700 3530700 5063000 14486 1580 5526 5658 22588;22589 22588 GTVVTGTLER 10 0 1 Unmodified _GTVVTGTLER_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.7921 2 516.787838 1031.56112 85097.55 0.38305 0.00019796 -0.18279 -9.4465E-05 0.20026 0.00010349 516.787844403526 521.791860752796 45.671 0.56402 45.671 45.44 46.004 0 174 36 7 0 0 0 5.7989E-09 2 21306 124.74 110.1 1 1.3568 1.1285 0 7396200 3295100 4101100 14487 1580 5526 5658 22590;22591 22590 GTWVQLK 7 1 0 Unmodified _GTWVQLK_ 0 0 0 Q6IAX2;P46778 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 420.2468 2 416.239796 830.465038 93979.86 0.22224 9.2504E-05 0.57242 0.00023826 0.79466 0.00033077 416.24023544386 420.246877377607 58.028 1.1535 58.028 57.572 58.725 0 349 92 6 0 0 0 0.032615 1 32836 65.263 36.734 1 0.75082 0.87288 0 252710000 138880000 113840000 14488 1571 5527 5659 22592 22592 GTWVQLK 7 1 0 Unmodified _GTWVQLK_ 0 0 0 Q6IAX2;P46778 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 420.2469 2 416.239796 830.465038 93975.02 0.31954 0.00013301 0.23676 9.8547E-05 0.5563 0.00023155 416.240034778743 420.246775740578 56.884 1.2523 56.884 56.376 57.628 0 351 95 6 0 0 0 0.03153 1 32771 66.994 38.465 1 0.7313 0.84567 0 201030000 115910000 85119000 14489 1571 5527 5659 22593 22593 GTWVQLK 7 1 0 Unmodified _GTWVQLK_ 0 0 0 Q6IAX2;P46778 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 420.2466 2 416.239796 830.465038 93997.11 -0.14442 -6.0112E-05 0.40898 0.00017024 0.26457 0.00011012 416.240047220596 420.24690896681 66.704 1.2696 66.704 66.283 67.553 0 278 83 6 0 0 0 0.03153 1 34608 66.994 38.465 1 0.96096 0.76544 0 19684000 10338000 9346600 14490 1571 5527 5659 22594 22594 GTWVQLK 7 1 0 Unmodified _GTWVQLK_ 0 0 0 Q6IAX2;P46778 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 420.2468 2 416.239796 830.465038 92767.19 -0.40097 -0.0001669 0.55294 0.00023016 0.15197 6.3257E-05 416.240083258441 420.246985756066 66.991 1.1999 66.991 66.582 67.782 0 247 71 5 0 0 0 0.040059 1 34036 59.641 34.083 1 0.92588 0.7434 0 14465000 7350800 7113900 14491 1571 5527 5659 22595 22595 GTYADDCLVQR 11 0 1 Unmodified _GTYADDCLVQR_ 0 0 0 G3V5S9;G3V1S4;Q4FZ45;Q9Y324;Q66K47;G3V2M5 G3V5S9 G3V5S9 FCF1;DKFZp686O2396 rRNA-processing protein FCF1 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.8033 2 649.295701 1296.57685 76014.57 0.67345 0.00043727 0.47064 0.00030558 1.1441 0.00074285 649.295931207995 654.300311573767 43.325 0.61532 43.325 43.052 43.667 -3.8147E-06 210 49 6 0 0 0 0.024429 1 23021 72.643 56.981 1 0.81932 0.83311 0 29579000 16358000 13222000 14492 1272 5528 5660 22596 22596 GTYADDCLVQR 11 0 1 Unmodified _GTYADDCLVQR_ 0 0 0 G3V5S9;G3V1S4;Q4FZ45;Q9Y324;Q66K47;G3V2M5 G3V5S9 G3V5S9 FCF1;DKFZp686O2396 rRNA-processing protein FCF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.2997 2 649.295701 1296.57685 74833.92 0.99778 0.00064785 0.20194 0.00013112 1.1997 0.00077897 649.295771518392 654.300088656144 42.655 0.51822 42.655 42.448 42.966 0 191 42 6 0 0 0 2.7755E-05 2 23053 101.9 81.567 1 0.83676 0.96468 0 54689000 26855000 27834000 14493 1272 5528 5660 22597;22598 22597 GTYADDCLVQR 11 0 1 Unmodified _GTYADDCLVQR_ 0 0 0 G3V5S9;G3V1S4;Q4FZ45;Q9Y324;Q66K47;G3V2M5 G3V5S9 G3V5S9 FCF1;DKFZp686O2396 rRNA-processing protein FCF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.2969 2 649.295701 1296.57685 75533.76 0.5961 0.00038704 0.23759 0.00015427 0.83368 0.00054131 649.295844067783 654.300137390018 50.344 0.56253 50.344 50.126 50.688 0 211 45 6 0 0 0 0.0030512 2 24659 60.518 50.288 1 1.1381 0.94242 0 11213000 5364300 5848500 14494 1272 5528 5660 22599;22600 22599 GTYADDCLVQR 11 0 1 Unmodified _GTYADDCLVQR_ 0 0 0 G3V5S9;G3V1S4;Q4FZ45;Q9Y324;Q66K47;G3V2M5 G3V5S9 G3V5S9 FCF1;DKFZp686O2396 rRNA-processing protein FCF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.2958 2 649.295701 1296.57685 73672.21 0.34686 0.00022521 0.30905 0.00020067 0.65591 0.00042588 649.29589382574 654.30008675545 50.802 0.6866 50.802 50.495 51.182 0 205 48 6 0 0 0 0.00039937 2 24330 81.525 65.863 1 1.1477 0.94716 0 8233500 4014000 4219500 14495 1272 5528 5660 22601;22602 22602 GTYLATFHQR 10 0 1 Unmodified _GTYLATFHQR_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q86UM1;C9JQN7 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3117 2 597.306729 1192.59891 78972.77 0.71957 0.0004298 0.48639 0.00029053 1.206 0.00072033 597.808716292643 602.31094847333 39.451 0.41484 39.451 39.222 39.637 3.8147E-06 115 34 6 0 0 0 0.00084902 2 20439 80.239 73.934 1 1.0853 1.1005 0 18127000 7899200 10228000 14496 241 5529 5661 22603;22604 22603 GTYLATFHQR 10 0 1 Unmodified _GTYLATFHQR_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q86UM1;C9JQN7 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.3068 2 597.306729 1192.59891 79073.24 0.42169 0.00025188 -0.21405 -0.00012785 0.20764 0.00012403 597.306501671357 602.311116604927 38.036 0.33627 38.036 37.896 38.233 0 76 25 4 0 0 0 0.00051176 2 19907 85.676 85.676 1 1.3138 1.3953 0 24064000 8929300 15135000 14497 241 5529 5661 22605;22606 22606 GTYLATFHQR 10 0 1 Unmodified _GTYLATFHQR_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q86UM1;C9JQN7 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.311 2 597.306729 1192.59891 80491.52 0.86914 0.00051914 -0.53023 -0.00031671 0.33891 0.00020243 597.807958244907 602.31062987175 44.894 0.32499 44.894 44.712 45.037 0 90 24 5 0 0 0 0.013553 1 20811 49.418 49.418 1 1.0119 0.88161 0 1498900 773430 725420 14498 241 5529 5661 22607 22607 GTYQPLSTR 9 0 1 Unmodified _GTYQPLSTR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.7667 2 511.766906 1021.51926 85833.57 0.81028 0.00041467 0.20035 0.00010253 1.0106 0.0005172 511.76681547571 516.771243062301 32.079 0.6302 32.079 31.79 32.42 0 269 59 6 0 0 0 0.00018573 1 15809 107.01 87.231 1 0.90119 1.003 0 78439000 41637000 36802000 14499 809 5530 5662 22608 22608 GTYQPLSTR 9 0 1 Unmodified _GTYQPLSTR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7668 2 511.766906 1021.51926 84752.71 0.42286 0.0002164 -0.12029 -6.1559E-05 0.30257 0.00015484 511.7665965663 516.770964081686 31.363 0.56907 31.363 31.167 31.736 1.9073E-06 250 51 7 0 0 0 0.00055371 2 15440 97.635 80.395 1 0.98904 1.1275 0 137100000 73302000 63794000 14500 809 5530 5662 22609;22610 22609 GVAFIR 6 0 1 Unmodified _GVAFIR_ 0 0 0 Q15717 Q15717 Q15717 ELAVL1 ELAV-like protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 331.7024 2 331.702849 661.391145 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.798 1 49.798 49.298 50.298 0 0 0 0 0.03215 1 27441 85.077 38.033 1 14501 1764 5531 5663 22611 22611 GVAIGQTSLTASVTNK 16 1 0 Unmodified _GVAIGQTSLTASVTNK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.9326 2 773.925394 1545.83624 72543.37 0.77275 0.00059805 -0.19354 -0.00014978 0.57922 0.00044827 773.925596003579 777.932249183485 74.101 0.46259 74.101 73.812 74.275 0 136 42 5 0 0 0 2.2862E-06 2 43366 92.856 92.856 1 0.79438 0.81356 0 14379000 8117400 6261900 14502 1937 5532 5664 22612;22613 22612 GVAIGQTSLTASVTNK 16 1 0 Unmodified _GVAIGQTSLTASVTNK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.9327 2 773.925394 1545.83624 71462.13 0.83241 0.00064422 -0.53482 -0.00041391 0.29759 0.00023031 773.92478583624 778.433013967697 72.892 0.51263 72.892 72.623 73.136 0 148 43 5 0 0 0 4.6811E-13 3 43719 124.38 124.38 1 0.94283 1.0209 0 22080000 10931000 11149000 14503 1937 5532 5664 22614;22615;22616 22614 GVAIGQTSLTASVTNK 16 1 0 Unmodified _GVAIGQTSLTASVTNK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 773.9232 2 773.925394 1545.83624 71642.59 0.8129 0.00062912 -1.1718 -0.00090689 -0.3589 -0.00027776 773.923770804211 777.932168845079 84.914 0.44891 84.914 84.666 85.115 0 122 31 5 0 0 0 0.0004078 2 45598 50.207 50.207 1 0.83097 0.65374 0 2277400 1294800 982590 14504 1937 5532 5664 22617;22618 22618 GVAINFVK 8 1 0 Unmodified _GVAINFVK_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 424.2549 2 424.255446 846.496338 91596.62 0.17375 7.3712E-05 0.24151 0.00010246 0.41526 0.00017618 424.255307774536 428.262479756316 70.457 0.98667 70.457 70.018 71.004 0 303 83 5 0 0 0 0.031174 2 40857 51.456 34.53 1 2.1965 2.3712 0 42048000 14140000 27908000 14505 261 5533 5665 22619;22620 22620 GVAINFVK 8 1 0 Unmodified _GVAINFVK_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 428.2625 2 424.255446 846.496338 94750.27 -0.39088 -0.00016583 0.4401 0.00018671 0.04922 2.0882E-05 424.255450315515 428.262728389529 80.562 0.69054 80.562 80.19 80.881 0 128 46 4 0 0 0 0.0631 1 42716 38.972 32.471 1 1.7287 1.3959 0 2552100 1046900 1505200 14506 261 5533 5665 22621 22621 GVAINMVTEEDK 12 1 0 Oxidation (M) _GVAINM(ox)VTEEDK_ GVAINM(1)VTEEDK GVAINM(74.17)VTEEDK 0 1 0 A8K7F6;P60842;A8K088;B4DNH2 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3307 2 661.318842 1320.62313 73888.87 0.58628 0.00038772 0.45364 0.0003 1.0399 0.00068772 661.82046739502 665.326324666075 43.315 0.72689 43.315 43.011 43.737 0 243 58 6 0 0 0 0.00010801 1 23081 74.173 66.444 1 2.5135 2.8242 0 69447000 10030000 59417000 14507 770 5534 5666 22622 22622 598 GVAINMVTEEDK 12 1 0 Oxidation (M) _GVAINM(ox)VTEEDK_ GVAINM(1)VTEEDK GVAINM(117.7)VTEEDK 0 1 0 A8K7F6;P60842;A8K088;B4DNH2 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.3188 2 661.318842 1320.62313 73998.84 0.97395 0.00064409 -0.25051 -0.00016567 0.72344 0.00047843 661.318750911013 665.325996007562 44.362 0.67747 44.362 43.952 44.63 0 310 59 8 0 0 0 1.6507E-08 2 23698 117.7 110.33 1 2.5918 2.9393 0 94750000 26422000 68328000 14508 770 5534 5666 22623;22624 22624 598 GVAINMVTEEDK 12 1 0 Oxidation (M) _GVAINM(ox)VTEEDK_ GVAINM(1)VTEEDK GVAINM(132.91)VTEEDK 0 1 0 A8K7F6;P60842;A8K088;B4DNH2 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.319 2 661.318842 1320.62313 74732.47 0.76476 0.00050575 -0.053549 -3.5413E-05 0.71121 0.00047034 661.319225704354 665.326064463876 42.848 0.73731 42.848 42.391 43.128 0 336 60 8 0 0 0 3.6881E-13 2 23073 132.91 132.91 1 2.6359 2.9749 0 127620000 36603000 91018000 14509 770 5534 5666 22625;22626 22626 598 GVAINMVTEEDK 12 1 0 Oxidation (M) _GVAINM(ox)VTEEDK_ GVAINM(1)VTEEDK GVAINM(134.68)VTEEDK 0 1 0 A8K7F6;P60842;A8K088;B4DNH2 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.3195 2 661.318842 1320.62313 74304.43 0.69898 0.00046225 -0.19387 -0.00012821 0.50511 0.00033404 661.318848958507 665.326006485569 43.569 0.54372 43.569 43.339 43.883 0 242 41 10 0 0 0 2.3953E-13 2 23636 134.68 126.36 1 2.5661 2.9384 0 162790000 45312000 117480000 14510 770 5534 5666 22627;22628 22628 598 GVAINMVTEEDKR 13 1 1 Unmodified _GVAINMVTEEDKR_ 0 0 1 A8K7F6;P60842;A8K088;B4DNH2 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.9248 3 487.917052 1460.72933 85985.2 0.12013 5.8616E-05 0.35886 0.00017509 0.47899 0.00023371 488.252206717825 493.92445098513 58.894 0.69146 58.894 58.647 59.338 -3.8147E-06 150 55 5 0 0 0 0.014352 1 29976 27.676 25.113 1 1.2926 1.108 0 2741000 960160 1780800 14511 770 5535 5667 22629 22629 GVAINMVTEEDKR 13 1 1 Unmodified _GVAINMVTEEDKR_ 0 0 1 A8K7F6;P60842;A8K088;B4DNH2 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.3845 2 731.37194 1460.72933 74119.63 0.57367 0.00041957 0.3249 0.00023762 0.89857 0.00065719 731.873372077229 740.383619359409 59.214 0.38659 59.214 59.073 59.459 0 110 31 5 0 0 0 0.018354 1 29537 39.917 39.917 1 2.1278 1.8152 0 1434400 468700 965710 14512 770 5535 5667 22630 22630 GVAINMVTEEDKR 13 1 1 Unmodified _GVAINMVTEEDKR_ 0 0 1 A8K7F6;P60842;A8K088;B4DNH2 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.925 3 487.917052 1460.72933 NaN NaN NaN 0.20175 9.8439E-05 NaN NaN NaN NaN 59.226 0.42583 59.226 59.02 59.446 3.8147E-06 0 0 0 0.052324 1 29570 26.13 19.713 1 NaN NaN 0 1248200 0 1248200 14513 770 5535 5667 22631 22631 GVAVDGLNQLTVTTGSEGLLK 21 1 0 Unmodified _GVAVDGLNQLTVTTGSEGLLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1037.0691 2 1036.56533 2071.1161 60786.66 0.26706 0.00027683 0.27375 0.00028376 0.54081 0.00056058 1037.06702209613 1040.57278001559 114.28 0.61328 114.28 114.03 114.64 0 292 44 10 0 0 0 9.2013E-07 2 72355 71.879 71.879 1 0.95488 1.0791 0 105800000 54356000 51447000 14514 486 5536 5668 22632;22633 22633 GVAVDGLNQLTVTTGSEGLLK 21 1 0 Unmodified _GVAVDGLNQLTVTTGSEGLLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1041.0745 2 1036.56533 2071.1161 60641.39 0.30975 0.00032108 -0.048703 -5.0483E-05 0.26105 0.00027059 1037.06680307219 1040.57236733998 113.78 0.66939 113.78 113.55 114.22 7.6294E-06 299 48 10 0 0 0 1.3377E-101 2 73810 210.34 210.34 1 0.98447 1.1009 0 86206000 42852000 43355000 14515 486 5536 5668 22634;22635 22635 GVAVDGLNQLTVTTGSEGLLK 21 1 0 Unmodified _GVAVDGLNQLTVTTGSEGLLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1040.5737 2 1036.56533 2071.1161 59941.36 0.6185 0.00064112 0.10932 0.00011332 0.72782 0.00075444 1037.06718093195 1041.07387754337 125.77 0.50217 125.77 125.52 126.02 7.6294E-06 201 22 13 0 0 0 5.7436E-196 2 75477 266.15 266.15 1 1.2287 1.0578 0 92710000 40862000 51849000 14516 486 5536 5668 22636;22637 22637 GVAVDGLNQLTVTTGSEGLLK 21 1 0 Unmodified _GVAVDGLNQLTVTTGSEGLLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1041.0747 2 1036.56533 2071.1161 59780.17 0.50942 0.00052805 -0.062125 -6.4397E-05 0.4473 0.00046365 1037.06696596467 1040.57224761361 125.6 0.63524 125.6 125.36 125.99 0 205 29 10 0 0 0 5.2541E-30 2 74450 137.52 137.52 1 1.283 1.0921 0 83491000 36057000 47434000 14517 486 5536 5668 22638;22639 22639 GVDEVTIVNILTNR 14 0 1 Unmodified _GVDEVTIVNILTNR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9;H0YKV8;H0YMD9 V9HW65 V9HW65 HEL-S-270;ANXA2 Annexin;Annexin A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.9337 2 771.927937 1541.84132 70303.9 0.83719 0.00064625 1.4175 0.0010942 2.2547 0.0017405 771.929644072248 776.932352936889 120.26 0.41293 120.26 120.06 120.47 0 138 28 6 0 0 0 2.8516E-14 2 77474 155.97 149.73 1 1.7833 1.7889 0 16140000 7354100 8785600 14518 193 5537 5669 22640;22641 22641 GVDEVTIVNILTNR 14 0 1 Unmodified _GVDEVTIVNILTNR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9;H0YKV8;H0YMD9 V9HW65 V9HW65 HEL-S-270;ANXA2 Annexin;Annexin A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.9332 2 771.927937 1541.84132 69232.86 0.94905 0.0007326 0.35614 0.00027492 1.3052 0.0010075 771.928427800465 776.932263152139 119.78 0.46212 119.78 119.54 120 0 151 33 6 0 0 0 2.9612E-21 2 78991 174.24 164.14 1 1.1965 1.1986 0 18551000 8012000 10540000 14519 193 5537 5669 22642;22643 22643 GVDEVTIVNILTNR 14 0 1 Unmodified _GVDEVTIVNILTNR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9;H0YKV8;H0YMD9 V9HW65 V9HW65 HEL-S-270;ANXA2 Annexin;Annexin A2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.9257 2 771.927937 1541.84132 70700.8 1.2976 0.0010017 -1.0511 -0.00081139 0.24652 0.0001903 771.926986962899 776.931323606879 132.77 0.5939 132.77 132.43 133.03 0 102 26 8 0 0 0 0.025698 2 80739 41.401 41.401 1 0.56592 0.47412 0 4023100 2208700 1814400 14520 193 5537 5669 22644;22645 22644 GVDIVMDPLGGSDTAK 16 1 0 Oxidation (M) _GVDIVM(ox)DPLGGSDTAK_ GVDIVM(1)DPLGGSDTAK GVDIVM(54.7)DPLGGSDTAK 0 1 0 K7ESA3;K7ENX2;K7EM19;B3KUF8;A0A024R1Z6;Q99536 K7ESA3 K7ESA3 VAT1 Synaptic vesicle membrane protein VAT-1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.8965 2 795.88762 1589.76069 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.277 1 83.277 82.777 83.777 0 0 0 0 0.0013092 1 51019 54.7 38.068 1 14521 98 5538 5670 22646 22646 87 GVDLQENNPASR 12 0 1 Unmodified _GVDLQENNPASR_ 0 0 0 A0A024R1U4;P51148;K7EIP6 A0A024R1U4 A0A024R1U4 RAB5C Ras-related protein Rab-5C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.3231 2 650.318022 1298.62149 NaN NaN NaN -0.068724 -4.4692E-05 NaN NaN NaN NaN 32.888 0.43925 32.888 32.668 33.107 0 0 0 0 1.9527E-08 1 16336 112.71 97.082 1 NaN NaN 0 8190900 0 8190900 14522 92 5539 5671 22647 22647 GVDLQENNPASR 12 0 1 Unmodified _GVDLQENNPASR_ 0 0 0 A0A024R1U4;P51148;K7EIP6 A0A024R1U4 A0A024R1U4 RAB5C Ras-related protein Rab-5C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.3227 2 650.318022 1298.62149 77665.79 0.68585 0.00044602 -0.027821 -1.8092E-05 0.65803 0.00042793 650.820297205683 655.321954968208 38.311 0.46122 38.311 38.039 38.5 0 98 35 5 0 0 0 0.00024224 2 17322 73.887 72.219 1 2.1943 1.9053 0 2197800 611520 1586300 14523 92 5539 5671 22648;22649 22649 GVDLVLNSLAEEK 13 1 0 Unmodified _GVDLVLNSLAEEK_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8854 2 693.877382 1385.74021 73458.78 0.58698 0.00040729 0.45819 0.00031793 1.0452 0.00072522 693.878171447919 697.884713130867 101.98 0.78927 101.98 101.75 102.54 0 231 60 6 0 0 0 0.00015631 1 64204 86.014 67.408 1 1.5563 1.7256 0 47639000 17909000 29730000 14524 587 5540 5672 22650 22650 GVDSLLYR 8 0 1 Unmodified _GVDSLLYR_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.7577 2 461.753267 921.491981 90706.8 0.10462 4.8309E-05 0.23964 0.00011065 0.34426 0.00015896 461.753378731938 466.757448162419 79.269 0.69441 79.269 78.95 79.644 0 165 41 5 0 0 0 0.063595 1 41807 38.792 30.019 1 1.4106 1.2681 0 2010400 794450 1216000 14525 1781 5541 5673 22651 22651 GVEAIPEGSHIK 12 1 0 Unmodified _GVEAIPEGSHIK_ 0 0 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.8331 2 618.832777 1235.651 78960.18 0.67298 0.00041646 0.019682 1.218E-05 0.69267 0.00042864 618.832668273145 622.839955280271 36.41 0.36938 36.41 36.223 36.592 0 139 34 6 0 0 0 0.00020601 2 18411 79.974 79.974 1 1.3061 1.2865 0 24320000 10778000 13543000 14526 1903 5542 5674 22652;22653 22653 GVEAIPEGSHIK 12 1 0 Unmodified _GVEAIPEGSHIK_ 0 0 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8419 2 618.832777 1235.651 80683.59 1.0453 0.00064689 0.39346 0.00024349 1.4388 0.00089038 618.832782577666 622.840106219641 35.199 0.37648 35.199 35.029 35.405 0 112 34 4 0 0 0 0.0012733 1 17874 61.56 61.56 1 1.417 1.5027 0 20403000 8838300 11565000 14527 1903 5542 5674 22654 22654 GVEAIPEGSHIK 12 1 0 Unmodified _GVEAIPEGSHIK_ 0 0 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.3348 2 618.832777 1235.651 78139.95 0.38628 0.00023904 -0.015843 -9.804E-06 0.37044 0.00022924 618.832719457938 622.839838211415 41.543 0.57038 41.543 41.338 41.909 0 153 44 5 0 0 0 0.020531 1 19263 39.305 34.521 1 1.6522 1.3098 0 4255600 1613800 2641800 14528 1903 5542 5674 22655 22655 GVEEEEEDGEMRE 13 0 1 Oxidation (M) _GVEEEEEDGEM(ox)RE_ GVEEEEEDGEM(1)RE GVEEEEEDGEM(202.03)RE 0 1 1 P62306 P62306 P62306 SNRPF Small nuclear ribonucleoprotein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.2993 2 777.299032 1552.58351 68272.81 0.3645 0.00028333 0.26315 0.00020455 0.62765 0.00048787 777.299177533477 782.303593444304 19.91 0.27565 19.91 19.768 20.043 0 41 8 7 0 0 0 2.31E-60 2 6384 202.03 202.03 1 1.2857 1.3107 0 27012000 11943000 15069000 14529 1643 5543 5675 22656;22657 22657 1423 GVEEEEEDGEMRE 13 0 1 Oxidation (M) _GVEEEEEDGEM(ox)RE_ GVEEEEEDGEM(1)RE GVEEEEEDGEM(133.89)RE 0 1 1 P62306 P62306 P62306 SNRPF Small nuclear ribonucleoprotein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.3033 2 777.299032 1552.58351 76985.36 0.11826 9.1925E-05 0.12233 9.5091E-05 0.2406 0.00018702 777.299209283957 782.303243012933 19.788 0.19888 19.788 19.689 19.888 0 20 7 4 0 0 0 2.1886E-13 2 6125 133.89 133.89 1 1.571 1.5619 0 7249600 3091200 4158400 14530 1643 5543 5675 22658;22659 22658 1423 GVEEEEEDGEMRE 13 0 1 Oxidation (M) _GVEEEEEDGEM(ox)RE_ GVEEEEEDGEM(1)RE GVEEEEEDGEM(68.11)RE 0 1 1 P62306 P62306 P62306 SNRPF Small nuclear ribonucleoprotein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 782.3027 2 777.299032 1552.58351 69594.05 0.36893 0.00028677 0.1076 8.3634E-05 0.47653 0.00037041 777.299265633231 782.303624404109 22.105 0.28979 22.105 21.962 22.252 0 54 10 8 0 0 0 0.00057511 3 6974 68.107 68.107 1 0.82925 0.69811 0 3067300 1719300 1348000 14531 1643 5543 5675 22660;22661;22662 22662 1423 GVEGYGNDQTYFEEIK 16 1 0 Unmodified _GVEGYGNDQTYFEEIK_ 0 0 0 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.9263 2 924.917963 1847.82137 NaN NaN NaN 0.44268 0.00040944 NaN NaN NaN NaN 84.877 0.30124 84.877 84.738 85.039 0 0 0 0 1.9677E-06 1 52114 86.911 77.256 1 NaN NaN 0 4690400 0 4690400 14532 1870 5544 5676 22663 22663 GVEICIATPGR 11 0 1 Unmodified _GVEICIATPGR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1;Q59F66;Q92841;B4DZQ7 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.8075 2 586.808248 1171.60194 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.065 1 75.065 74.565 75.565 0 0 0 0 0.00076435 1 44100 71.349 41.164 1 14533 1009;1801 5545 5677 22664 22664 GVEICIATPGR 11 0 1 Unmodified _GVEICIATPGR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1;Q59F66;Q92841;B4DZQ7 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.8121 2 586.808248 1171.60194 NaN NaN NaN -0.75654 -0.00044394 NaN NaN NaN NaN 73.897 0.83615 73.897 73.527 74.363 0 0 0 0 0.0016819 1 44374 81.525 56.706 1 NaN NaN 0 38841000 0 38841000 14534 1009;1801 5545 5677 22665 22665 GVEICIATPGR 11 0 1 Unmodified _GVEICIATPGR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1;Q59F66;Q92841;B4DZQ7 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.8083 2 586.808248 1171.60194 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.861 1 73.861 73.361 74.361 0 0 0 0 0.00045134 1 44382 76.282 18.574 1 14535 1009;1801 5545 5677 22666 22666 GVEICIATPGR 11 0 1 Unmodified _GVEICIATPGR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1;Q59F66;Q92841;B4DZQ7 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 591.8126 2 586.808248 1171.60194 NaN NaN NaN -0.3234 -0.00018977 NaN NaN NaN NaN 85.46 0.66924 85.46 85.198 85.868 -7.6294E-06 0 0 0 0.0088996 1 45969 60.518 44.316 1 NaN NaN 0 3947200 0 3947200 14536 1009;1801 5545 5677 22667 22667 GVEITGFPEAQALGLEVFHAGTALK 25 1 0 Unmodified _GVEITGFPEAQALGLEVFHAGTALK_ 0 0 0 Q3B7A7;Q59HH3;P22102 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.7941 3 852.454989 2554.34314 NaN NaN NaN -0.44592 -0.00038013 NaN NaN NaN NaN 129.69 0.80359 129.69 129.23 130.03 0 0 0 0 1.0691E-09 2 84315 64.152 51.597 1 NaN NaN 0 20363000 0 20363000 14537 1507 5546 5678 22668;22669 22669 GVEITGFPEAQALGLEVFHAGTALK 25 1 0 Unmodified _GVEITGFPEAQALGLEVFHAGTALK_ 0 0 0 Q3B7A7;Q59HH3;P22102 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.792 3 852.454989 2554.34314 NaN NaN NaN 1.275 0.0010869 NaN NaN NaN NaN 129.62 0.67024 129.62 129.32 129.99 0 0 0 0 5.9735E-32 1 84489 115.11 91.199 1 NaN NaN 0 7435800 7435800 0 14538 1507 5546 5678 22670 22670 GVEITGFPEAQALGLEVFHAGTALK 25 1 0 Unmodified _GVEITGFPEAQALGLEVFHAGTALK_ 0 0 0 Q3B7A7;Q59HH3;P22102 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.126 3 852.454989 2554.34314 NaN NaN NaN -0.36083 -0.0003076 NaN NaN NaN NaN 130.13 0.25015 130.13 130.05 130.3 -1.5259E-05 0 0 0 0.0017338 1 84845 32.956 25.334 1 NaN NaN 0 2598800 0 2598800 14539 1507 5546 5678 22671 22671 GVEITGFPEAQALGLEVFHAGTALK 25 1 0 Unmodified _GVEITGFPEAQALGLEVFHAGTALK_ 0 0 0 Q3B7A7;Q59HH3;P22102 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.1216 3 852.454989 2554.34314 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.33 1 129.33 128.83 129.83 0 0 0 0 8.5193E-10 1 84309 73.072 54.353 1 14540 1507 5546 5678 22672 22672 GVEITGFPEAQALGLEVFHAGTALK 25 1 0 Unmodified _GVEITGFPEAQALGLEVFHAGTALK_ 0 0 0 Q3B7A7;Q59HH3;P22102 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.46 3 852.454989 2554.34314 NaN NaN NaN -0.84411 -0.00071957 NaN NaN NaN NaN 129.11 0.94312 129.11 128.74 129.68 0 0 0 0 8.8479E-18 2 86087 89.979 76.387 1 NaN NaN 0 27163000 0 27163000 14541 1507 5546 5678 22673;22674 22674 GVEKPPHLAALILAR 15 1 1 Unmodified _GVEKPPHLAALILAR_ 0 0 1 Q53GF0;Q8NFW8;F5H296 Q53GF0 Q53GF0 CMAS N-acylneuraminate cytidylyltransferase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.9992 3 528.990992 1583.95115 NaN NaN NaN 0.58544 0.00030969 NaN NaN NaN NaN 95.504 0.39639 95.504 95.266 95.663 0 0 0 0 0.037219 1 53450 39.163 38.219 1 NaN NaN 0 907740 0 907740 14542 1788 5547 5679 22675 22675 GVEKPPHLAALILAR 15 1 1 Unmodified _GVEKPPHLAALILAR_ 0 0 1 Q53GF0;Q8NFW8;F5H296 Q53GF0 Q53GF0 CMAS N-acylneuraminate cytidylyltransferase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.3331 3 528.990992 1583.95115 NaN NaN NaN 0.26334 0.00013931 NaN NaN NaN NaN 94.953 0.35378 94.953 94.789 95.142 0 0 0 0 0.049764 1 52301 36.77 32.222 1 NaN NaN 0 1110300 0 1110300 14543 1788 5547 5679 22676 22676 GVENPAVQESNQK 13 1 0 Unmodified _GVENPAVQESNQK_ 0 0 0 Q96GX5;A0A087WUU7 Q96GX5 Q96GX5 MASTL Serine/threonine-protein kinase greatwall MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.3521 2 700.344237 1398.67392 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.685 1 22.685 22.185 23.185 0 0 0 0 0.0053372 1 8660 57.348 31.727 1 14544 1969 5548 5680 22677 22677 GVESVFDIMEMEDEER 16 0 1 2 Oxidation (M) _GVESVFDIM(ox)EM(ox)EDEER_ GVESVFDIM(1)EM(1)EDEER GVESVFDIM(45.88)EM(45.88)EDEER 0 2 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.4113 2 973.903338 1945.79212 63874.55 0.56422 0.0005495 -0.032825 -3.1969E-05 0.53139 0.00051753 973.90326188415 979.408952274913 91.457 0.5294 91.457 91.166 91.696 7.6294E-06 129 42 5 0 0 0 0.0015247 1 55160 45.879 44.179 1 2.6006 2.628 0 17800000 3962600 13837000 14545 1411 5549 5681 22678 22678 1089;1090 GVESVFDIMEMEDEER 16 0 1 2 Oxidation (M) _GVESVFDIM(ox)EM(ox)EDEER_ GVESVFDIM(1)EM(1)EDEER GVESVFDIM(42.98)EM(42.98)EDEER 0 2 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 974.4061 2 973.903338 1945.79212 62985.08 0.97132 0.00094597 -0.14039 -0.00013672 0.83093 0.00080925 974.404495589568 978.907347593465 90.656 0.48796 90.656 90.374 90.862 0 61 38 5 0 0 0 0.0023333 1 55988 42.976 42.773 1 2.0573 2.0712 0 10797000 3582000 7215300 14546 1411 5549 5681 22679 22679 1089;1090 GVETIANDVVSLATK 15 1 0 Unmodified _GVETIANDVVSLATK_ 0 0 0 Q01991;B4DS43;B4DLQ2;H0YDD4;E9PEJ4;B4DJX1;Q86YI5;A0A024R3D8;P10515 Q01991 Q01991 DLAT Acetyltransferase component of pyruvate dehydrogenase complex;Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.9229 2 758.914495 1515.81444 NaN NaN NaN 0.49687 0.00037709 NaN NaN NaN NaN 115.4 0.33875 115.4 115.19 115.53 7.6294E-06 0 0 0 0.039085 1 73398 38.875 28.288 1 NaN NaN 0 1996700 0 1996700 14547 134 5550 5682 22680 22680 GVETIANDVVSLATK 15 1 0 Unmodified _GVETIANDVVSLATK_ 0 0 0 Q01991;B4DS43;B4DLQ2;H0YDD4;E9PEJ4;B4DJX1;Q86YI5;A0A024R3D8;P10515 Q01991 Q01991 DLAT Acetyltransferase component of pyruvate dehydrogenase complex;Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.9243 2 758.914495 1515.81444 NaN NaN NaN 0.59789 0.00045375 NaN NaN NaN NaN 114.83 0.35634 114.83 114.7 115.06 0 0 0 0 0.0054865 1 74873 55.04 40.361 1 NaN NaN 0 2096400 0 2096400 14548 134 5550 5682 22681 22681 GVFVQSVLPYFVATK 15 1 0 Unmodified _GVFVQSVLPYFVATK_ 0 0 0 B4DWS6;B3KQJ0;D3DR22;Q53GQ0;A0A1B0GV93 B4DWS6 B4DWS6 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.4324 2 827.963791 1653.91303 NaN NaN NaN -0.011931 -9.8781E-06 NaN NaN NaN NaN 125.59 0.33124 125.59 125.43 125.77 0 0 0 0 0.019076 1 81625 43.084 17.425 1 NaN NaN 0 1638800 0 1638800 14549 928 5551 5683 22682 22682 GVFVQSVLPYFVATK 15 1 0 Unmodified _GVFVQSVLPYFVATK_ 0 0 0 B4DWS6;B3KQJ0;D3DR22;Q53GQ0;A0A1B0GV93 B4DWS6 B4DWS6 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.972 2 827.963791 1653.91303 NaN NaN NaN -0.011857 -9.8171E-06 NaN NaN NaN NaN 125.14 0.30904 125.14 124.99 125.3 0 0 0 0 0.0043571 1 83305 57.836 42.864 1 NaN NaN 0 1722700 0 1722700 14550 928 5551 5683 22683 22683 GVGAEPLLPWNR 12 0 1 Unmodified _GVGAEPLLPWNR_ 0 0 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.8552 2 654.856586 1307.69862 NaN NaN NaN -0.6999 -0.00045833 NaN NaN NaN NaN 100.33 0.50857 100.33 100.04 100.55 0 0 0 0 0.0077982 1 61501 57.859 39.994 1 NaN NaN 0 3917200 3917200 0 14551 903 5552 5684 22684 22684 GVGASGSFR 9 0 1 Unmodified _GVGASGSFR_ 0 0 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 424.2183 2 419.214309 836.414065 92006.15 -0.070432 -2.9526E-05 0.037825 1.5857E-05 -0.032607 -1.3669E-05 419.214228690396 424.21834970989 23.393 0.66582 23.393 23.103 23.769 -1.9073E-06 149 31 8 0 0 0 0.0013285 2 9217 86.833 58.615 1 1.3508 1.5731 0 188120000 80858000 107260000 14552 1451 5553 5685 22685;22686 22685 GVGASGSFR 9 0 1 Unmodified _GVGASGSFR_ 0 0 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 419.2142 2 419.214309 836.414065 90441.88 -0.39815 -0.00016691 2.0548 0.00086139 1.6566 0.00069448 419.215432181542 424.218578272433 25.48 0.48257 25.48 25.304 25.786 -1.9073E-06 89 19 8 0 0 0 0.0015025 2 9267 84.568 53.339 1 0.46138 0.37764 0 16348000 11135000 5212400 14553 1451 5553 5685 22687;22688 22687 GVGLLNTGSYYEHVK 15 1 0 Unmodified _GVGLLNTGSYYEHVK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.9275 2 818.920112 1635.82567 68398.31 0.6331 0.00051846 -0.083132 -6.8079E-05 0.54997 0.00045038 818.920208492801 822.927003014274 74.168 0.66859 74.168 73.895 74.564 -7.6294E-06 173 55 5 0 0 0 0.00012109 2 43399 91.701 91.701 1 1.5784 1.5484 0 20558000 8353400 12205000 14554 1914 5554 5686 22689;22690 22690 GVGLLNTGSYYEHVK 15 1 0 Unmodified _GVGLLNTGSYYEHVK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.9541 3 546.2825 1635.82567 80389.13 0.55116 0.00030109 -0.019038 -1.04E-05 0.53212 0.00029069 546.282442187493 548.953440389014 74.128 1.1836 74.128 73.865 75.049 0 461 100 7 0 0 0 6.8056E-05 2 43417 65.472 65.472 1 1.1538 1.3085 0 94914000 40983000 53931000 14555 1914 5554 5686 22691;22692 22692 GVGLLNTGSYYEHVK 15 1 0 Unmodified _GVGLLNTGSYYEHVK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.282 3 546.2825 1635.82567 80875.08 0.50746 0.00027722 -0.04133 -2.2578E-05 0.46613 0.00025464 546.282330228291 548.953636407202 72.538 0.63524 72.538 72.278 72.913 0 324 56 7 0 0 0 1.6657E-07 2 43479 101.62 101.62 1 1.4232 1.6136 0 138330000 53397000 84935000 14556 1914 5554 5686 22693;22694 22694 GVGLLNTGSYYEHVK 15 1 0 Unmodified _GVGLLNTGSYYEHVK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.9212 2 818.920112 1635.82567 67622.52 0.73787 0.00060425 -0.10944 -8.9623E-05 0.62843 0.00051463 819.422061648384 823.428613899145 72.541 0.48038 72.541 72.356 72.836 0 192 43 6 0 0 0 0.00021998 2 43483 90.913 90.913 1 1.7016 1.7386 0 25781000 6924900 18856000 14557 1914 5554 5686 22695;22696 22696 GVGLLNTGSYYEHVK 15 1 0 Unmodified _GVGLLNTGSYYEHVK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 822.9263 2 818.920112 1635.82567 67353.63 0.67355 0.00055158 -0.072382 -5.9275E-05 0.60117 0.00049231 819.421202004173 822.927115068493 84.906 0.73345 84.906 84.558 85.291 0 297 51 9 0 0 0 0.03466 1 46285 31.639 31.639 1 1.6005 1.2534 0 16556000 6165400 10391000 14558 1914 5554 5686 22697 22697 GVGLLNTGSYYEHVK 15 1 0 Unmodified _GVGLLNTGSYYEHVK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.954 3 546.2825 1635.82567 80221.09 0.52096 0.00028459 0.61416 0.00033551 1.1351 0.0006201 546.282520025529 548.953576710983 84.905 1.2701 84.905 84.434 85.704 0 555 86 12 0 0 0 6.9208E-05 1 46302 71.279 71.279 1 1.5605 1.287 0 41854000 15796000 26058000 14559 1914 5554 5686 22698 22698 GVGLLNTGSYYEHVK 15 1 0 Unmodified _GVGLLNTGSYYEHVK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.9537 3 546.2825 1635.82567 80198.45 0.62062 0.00033903 -0.19111 -0.0001044 0.42951 0.00023463 546.616734079082 548.953555044625 84.932 1.2318 84.932 84.607 85.838 0 442 80 10 0 0 0 0.007006 1 45519 30.172 30.172 1 1.6361 1.3545 0 33648000 12407000 21242000 14560 1914 5554 5686 22699 22699 GVGLLNTGSYYEHVK 15 1 0 Unmodified _GVGLLNTGSYYEHVK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.921 2 818.920112 1635.82567 67654.98 0.80794 0.00066164 -0.077875 -6.3773E-05 0.73007 0.00059787 818.919809475791 822.926947706888 84.929 0.75313 84.929 84.619 85.372 0 296 51 9 0 0 0 0.01464 1 45521 44.299 44.299 1 1.6098 1.2923 0 14075000 5453700 8621600 14561 1914 5554 5686 22700 22700 GVIDLIFEK 9 1 0 Unmodified _GVIDLIFEK_ 0 0 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;C9J6B6;C9K073;C9J2Z7 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.3069 2 517.30005 1032.58555 85153.15 0.59782 0.00030925 -0.30293 -0.00015671 0.2949 0.00015255 517.300429091549 521.306817110055 115.39 0.46573 115.39 115.12 115.59 0 91 29 5 0 0 0 0.010772 1 75243 58.981 40.198 1 1.5127 1.5299 0 8897900 3668900 5229000 14562 896 5555 5687 22701 22701 GVIFYLR 7 0 1 Unmodified _GVIFYLR_ 0 0 0 O95831;A0A140VK04;E9PMA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.2577 2 434.257988 866.501424 NaN NaN NaN -1.8527 -0.00080455 NaN NaN NaN NaN 89.115 0.29637 89.115 88.949 89.246 0 0 0 0 0.053677 1 54991 56.51 19.923 1 NaN NaN 0 4403400 4403400 0 14563 1431 5556 5688 22702 22702 GVLANALAGR 10 0 1 Unmodified _GVLANALAGR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.2806 2 471.279983 940.545414 87985.67 0.19988 9.4202E-05 0.19699 9.2837E-05 0.39687 0.00018704 471.279926015793 476.284251833242 60.725 0.44181 60.725 60.559 61.001 0 147 35 5 0 0 0 0.00079443 1 34607 81.119 35.237 1 0.9523 1.037 0 51133000 21855000 29279000 14564 1936 5557 5689 22703 22703 GVLANALAGR 10 0 1 Unmodified _GVLANALAGR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2798 2 471.279983 940.545414 88122.69 0.18127 8.5429E-05 0.27294 0.00012863 0.45421 0.00021406 471.279962165298 476.284308327046 59.4 0.43639 59.4 59.203 59.639 0 170 39 6 0 0 0 1.3907E-05 1 34556 102.3 58.835 1 0.9623 1.1164 0 58472000 28917000 29555000 14565 1936 5557 5689 22704 22704 GVLANALAGR 10 0 1 Unmodified _GVLANALAGR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.2803 2 471.279983 940.545414 88566.55 -0.020165 -9.5031E-06 0.19463 9.1724E-05 0.17446 8.2221E-05 471.279982271131 476.284178095538 70.722 0.43316 70.722 70.477 70.91 0 138 36 5 0 0 0 0.0011672 1 36363 75.109 41.752 1 1.1376 0.94886 0 6620700 3545500 3075200 14566 1936 5557 5689 22705 22705 GVLANALAGRDEK 13 1 1 Unmodified _GVLANALAGRDEK_ 0 0 1 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.3736 2 657.362233 1312.70991 76184.91 0.36211 0.00023804 0.19627 0.00012902 0.55838 0.00036706 657.362723397383 666.373664895513 51.481 0.47651 51.481 51.2 51.677 0 138 35 6 0 0 0 0.00064108 1 25365 76.655 76.655 1 1.2827 1.0651 0 3720600 1705700 2015000 14567 1936 5558 5690 22706 22706 GVLANALAGRDEK 13 1 1 Unmodified _GVLANALAGRDEK_ 0 0 1 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.3735 2 657.362233 1312.70991 76974.92 0.35959 0.00023638 0.23994 0.00015773 0.59953 0.00039411 657.362975044843 666.37363368899 51.614 0.50557 51.614 51.41 51.916 3.8147E-06 128 31 6 0 0 0 0.001443 1 24883 67.214 61.994 1 1.213 1.0275 0 3492400 1386700 2105700 14568 1936 5558 5690 22707 22707 GVLHTFSPSPK 11 1 0 Unmodified _GVLHTFSPSPK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.327 2 585.319306 1168.62406 81491.55 0.84612 0.00049525 0.09633 5.6384E-05 0.94245 0.00055164 585.319366675693 589.326211796281 40.134 0.48815 40.134 39.783 40.271 0 100 42 4 0 0 0 0.00034828 1 21276 85.533 85.533 1 0.85945 0.85802 0 15039000 9034000 6005300 14569 229 5559 5691 22708 22708 GVLLFGPPGTGK 12 1 0 Unmodified _GVLLFGPPGTGK_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.8393 2 571.832049 1141.64954 80484.45 0.76368 0.0004367 -0.99115 -0.00056677 -0.22747 -0.00013008 571.832594969768 575.839129634072 95.788 0.97891 95.788 95.183 96.162 0 301 79 5 0 0 0 0.0002356 3 58132 73.985 73.985 1 2.4673 2.4263 0 23662000 6642100 17020000 14570 620 5560 5692 22709;22710;22711 22709 GVLLFGPPGTGK 12 1 0 Unmodified _GVLLFGPPGTGK_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.8394 2 571.832049 1141.64954 81591.53 0.71105 0.0004066 -0.75299 -0.00043058 -0.041937 -2.3981E-05 571.832571704231 575.839035721859 94.82 0.87241 94.82 94.283 95.156 0 288 73 5 0 0 0 0.0028313 1 58753 57.59 57.59 1 2.4929 2.707 0 22300000 8433400 13866000 14571 620 5560 5692 22712 22712 GVLLTDGSEK 10 1 0 Unmodified _GVLLTDGSEK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.7814 2 509.774396 1017.53424 85083.31 0.07126 3.6327E-05 0.23259 0.00011857 0.30386 0.0001549 509.774278886836 513.781409622395 46.583 0.70245 46.583 46.142 46.845 0 159 41 7 0 0 0 0.0022766 2 21825 69.825 51.049 1 1.7237 1.4144 0 5156000 2054100 3101900 14572 695 5561 5693 22713;22714 22713 GVLLYGPPGCGK 12 1 0 Unmodified _GVLLYGPPGCGK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.329 2 609.320991 1216.62743 76163.45 0.63276 0.00038556 -1.1396 -0.00069441 -0.50687 -0.00030885 609.320172866075 613.328154877049 71.719 0.77852 71.719 71.368 72.146 0 235 64 5 0 0 0 0.00018978 1 41817 76.679 62.472 1 0.80408 0.79915 0 19091000 9198800 9891900 14573 1920 5562 5694 22715 22715 GVLLYGPPGCGK 12 1 0 Unmodified _GVLLYGPPGCGK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.3289 2 609.320991 1216.62743 77902.38 0.43112 0.00026269 0.34477 0.00021008 0.77589 0.00047277 609.320880487393 613.328428003513 70.295 0.74756 70.295 70.074 70.821 0 171 61 4 0 0 0 0.0028278 1 42027 57.598 47.312 1 1.3002 1.3027 0 13884000 5696800 8187200 14574 1920 5562 5694 22716 22716 GVLLYGPPGTGK 12 1 0 Unmodified _GVLLYGPPGTGK_ 0 0 0 Q8NB90;Q59GS3;A0A140VJS3;P62195;J3QLH6;J3KRP2;J3QSA9;J3QQM1;J3QRW1;J3QRR3 Q8NB90;Q59GS3 Q8NB90 SPATA5;PSMC5 Spermatogenesis-associated protein 5;26S protease regulatory subunit 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.837 2 579.829506 1157.64446 83471.38 0.2671 0.00015487 -0.19793 -0.00011477 0.06917 4.0107E-05 579.828573996505 583.836664393538 74.54 0.65697 74.54 74.199 74.856 0 161 53 5 0 0 0 1.9348E-05 2 43755 103.7 0 1 1.6992 1.7699 0 16844000 6017200 10827000 14575 1919;608 5563 5695 22717;22718 22717 GVLLYGPPGTGK 12 1 0 Unmodified _GVLLYGPPGTGK_ 0 0 0 Q8NB90;Q59GS3;A0A140VJS3;P62195;J3QLH6;J3KRP2;J3QSA9;J3QQM1;J3QRW1;J3QRR3 Q8NB90;Q59GS3 Q8NB90 SPATA5;PSMC5 Spermatogenesis-associated protein 5;26S protease regulatory subunit 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.8373 2 579.829506 1157.64446 82597.6 0.53604 0.00031081 -0.49824 -0.00028889 0.037798 2.1917E-05 579.828480827277 583.836534301462 73.326 0.61546 73.326 73.005 73.621 0 183 53 5 0 0 0 0.00021585 3 43924 81.972 0 1 1.9652 2.0479 0 24460000 9661600 14799000 14576 1919;608 5563 5695 22719;22720;22721 22719 GVLMYGPPGCGK 12 1 0 Oxidation (M) _GVLM(ox)YGPPGCGK_ GVLM(1)YGPPGCGK GVLM(48.79)YGPPGCGK 0 1 0 A8K2M0;P43686 A8K2M0 A8K2M0 PSMC4 26S protease regulatory subunit 6B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.3038 2 626.296659 1250.57876 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.123 1 54.123 53.623 54.623 0 0 0 0 0.011313 1 30388 48.794 36.947 1 14577 710 5564 5696 22722 22722 545 GVLSTLIAGPVVEISHQLR 19 0 1 Unmodified _GVLSTLIAGPVVEISHQLR_ 0 0 0 Q86XI2;B3KRQ2;B4DHE5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.0555 3 663.72123 1988.14186 75066.84 0.77663 0.00051546 0.24714 0.00016403 1.0238 0.00067949 664.055724767176 667.391571965924 128.17 1.4528 128.17 127.34 128.79 0 245 94 4 0 0 0 1.7032E-06 4 83672 70.942 70.942 1 0.87789 0.91755 0 10683000 5228000 5454600 14578 1887 5565 5697 22723;22724;22725;22726 22726 GVLSTLIAGPVVEISHQLR 19 0 1 Unmodified _GVLSTLIAGPVVEISHQLR_ 0 0 0 Q86XI2;B3KRQ2;B4DHE5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1000.5844 2 995.078207 1988.14186 63096.38 0.56359 0.00056082 0.028147 2.8009E-05 0.59174 0.00058883 995.57920056711 1000.08203661699 127.86 0.54478 127.86 127.62 128.17 -7.6294E-06 88 33 5 0 0 0 0.010678 1 83322 25.448 25.448 1 0.68932 0.73233 0 3751300 2089000 1662300 14579 1887 5565 5697 22727 22727 GVLSTLIAGPVVEISHQLR 19 0 1 Unmodified _GVLSTLIAGPVVEISHQLR_ 0 0 0 Q86XI2;B3KRQ2;B4DHE5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.057 3 663.72123 1988.14186 NaN NaN NaN -0.03154 -2.0934E-05 NaN NaN NaN NaN 127.67 0.72859 127.67 127.34 128.07 0 0 0 0 0.0005375 1 83013 50.392 44.733 1 NaN NaN 0 4433600 0 4433600 14580 1887 5565 5697 22728 22728 GVLSTLIAGPVVEISHQLR 19 0 1 Unmodified _GVLSTLIAGPVVEISHQLR_ 0 0 0 Q86XI2;B3KRQ2;B4DHE5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3915 3 663.72123 1988.14186 74701.88 0.83745 0.00055583 0.25583 0.0001698 1.0933 0.00072563 664.055659962089 667.057328710659 127.45 1.6131 127.45 126.24 127.85 -7.6294E-06 383 101 8 0 0 0 1.8911E-06 5 84946 70.335 70.335 1 1.0456 1.0474 0 18606000 9822900 8783400 14581 1887 5565 5697 22729;22730;22731;22732;22733 22731 GVLSTLIAGPVVEISHQLR 19 0 1 Unmodified _GVLSTLIAGPVVEISHQLR_ 0 0 0 Q86XI2;B3KRQ2;B4DHE5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1000.585 2 995.078207 1988.14186 64649.5 0.6457 0.00064253 -0.43033 -0.00042821 0.21538 0.00021432 995.578911710733 1000.58421746603 127.3 0.66462 127.3 126.99 127.65 -7.6294E-06 118 40 4 0 0 0 0.0021458 2 85221 35.204 35.204 1 1.0544 1.0634 0 6168600 2873900 3294800 14582 1887 5565 5697 22734;22735 22735 GVLSTLIAGPVVEISHQLR 19 0 1 Unmodified _GVLSTLIAGPVVEISHQLR_ 0 0 0 Q86XI2;B3KRQ2;B4DHE5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.0583 3 663.72123 1988.14186 NaN NaN NaN 0.29063 0.0001929 NaN NaN NaN NaN 126.96 0.89079 126.96 126.18 127.07 -7.6294E-06 0 0 0 1.2506E-06 1 84365 70.235 66.574 1 NaN NaN 0 7185100 0 7185100 14583 1887 5565 5697 22736 22736 GVLSTLIAGPVVEISHQLR 19 0 1 Unmodified _GVLSTLIAGPVVEISHQLR_ 0 0 0 Q86XI2;B3KRQ2;B4DHE5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.392 3 663.72123 1988.14186 74323.74 0.74669 0.00049559 -0.045791 -3.0392E-05 0.7009 0.0004652 664.055456489944 667.391555654758 134.64 0.14542 134.64 134.56 134.7 0 26 3 9 0 0 0 3.6352E-07 2 82309 70.837 70.837 1 1.8265 1.5628 0 39796000 14226000 25571000 14584 1887 5565 5697 22737;22738 22737 GVLSTLIAGPVVEISHQLR 19 0 1 Unmodified _GVLSTLIAGPVVEISHQLR_ 0 0 0 Q86XI2;B3KRQ2;B4DHE5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.058 3 663.72123 1988.14186 74867.57 0.75979 0.00050429 0.3893 0.00025839 1.1491 0.00076268 664.055680789602 667.391805592596 134.59 0.19067 134.59 134.47 134.66 0 43 5 11 0 0 0 1.1309E-05 2 81385 43.116 43.116 1 2.1101 1.8406 0 40741000 12789000 27952000 14585 1887 5565 5697 22739;22740 22739 GVNLDPLGK 9 1 0 Unmodified _GVNLDPLGK_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.761 2 456.761092 911.507631 90390.02 0.27797 0.00012696 0.36426 0.00016638 0.64222 0.00029334 456.761143899279 460.76833369589 71.673 1.1918 71.673 70.868 72.06 0 465 100 9 0 0 0 0.0064086 1 41681 64.265 52.058 1 1.0954 1.2338 0 124440000 59754000 64683000 14586 1570 5566 5698 22741 22741 GVNLDPLGK 9 1 0 Unmodified _GVNLDPLGK_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.7681 2 456.761092 911.507631 89821.52 0.22938 0.00010477 0.21883 9.9955E-05 0.44821 0.00020473 456.761059220892 460.768255345064 70.423 1.2518 70.423 69.606 70.858 0 432 103 8 0 0 0 0.012771 2 42170 57.177 46.361 1 1.0495 1.205 0 170060000 85783000 84275000 14587 1570 5566 5698 22742;22743 22743 GVNLDPLGK 9 1 0 Unmodified _GVNLDPLGK_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.7686 2 456.761092 911.507631 90007.87 0.24925 0.00011385 -0.070682 -3.2285E-05 0.17857 8.1564E-05 456.761017186115 460.76806608417 81.535 0.91727 81.535 81.13 82.047 0 285 56 9 0 0 0 0.017716 3 44035 52.716 43.246 1 1.1474 0.91268 0 19407000 8894200 10512000 14588 1570 5566 5698 22744;22745;22746 22744 GVNLDPLGK 9 1 0 Unmodified _GVNLDPLGK_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 460.7684 2 456.761092 911.507631 89284.6 0.048384 2.21E-05 0.44541 0.00020345 0.4938 0.00022555 456.761225421383 460.768293404965 81.728 0.91116 81.728 81.282 82.194 0 246 49 8 0 0 0 0.017716 2 43355 52.716 47.082 1 1.1224 0.90104 0 17986000 8841200 9144300 14589 1570 5566 5698 22747;22748 22748 GVNLPGAAVDLPAVSEK 17 1 0 Unmodified _GVNLPGAAVDLPAVSEK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;Q8WUW7;Q504U3;H3BR70 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.9498 2 818.948869 1635.88319 66461.28 0.85428 0.00069961 0.17143 0.00014039 1.0257 0.00084 818.949100778458 822.956103689683 104.56 0.75491 104.56 104.25 105.01 7.6294E-06 402 63 9 0 0 0 6.862E-13 2 64666 121.04 121.04 1 3.2474 3.6588 0 115270000 27426000 87848000 14590 1481 5567 5699 22749;22750 22750 GVNLPGAAVDLPAVSEK 17 1 0 Unmodified _GVNLPGAAVDLPAVSEK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;Q8WUW7;Q504U3;H3BR70 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.9575 2 818.948869 1635.88319 66074.98 0.67497 0.00055277 0.07556 6.188E-05 0.75053 0.00061465 818.948935554764 822.956024690355 103.95 0.69127 103.95 103.59 104.28 0 396 61 9 0 0 0 7.0601E-09 2 65690 100.22 100.22 1 3.2557 3.6764 0 128860000 30682000 98177000 14591 1481 5567 5699 22751;22752 22751 GVNLPGAAVDLPAVSEK 17 1 0 Unmodified _GVNLPGAAVDLPAVSEK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;Q8WUW7;Q504U3;H3BR70 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 822.9567 2 818.948869 1635.88319 66667.42 0.73671 0.00060333 -0.075612 -6.1922E-05 0.6611 0.0005414 818.949457466933 822.956287105114 116.21 0.52896 116.21 115.98 116.5 0 135 22 8 0 0 0 0.00010704 1 68244 59.306 59.306 1 2.2577 1.7742 0 17139000 5026800 12112000 14592 1481 5567 5699 22753 22753 GVNLPGAAVDLPAVSEK 17 1 0 Unmodified _GVNLPGAAVDLPAVSEK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;Q8WUW7;Q504U3;H3BR70 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 823.3985 2 818.948869 1635.88319 66839.19 1.0347 0.00084737 -0.31488 -0.00025787 0.71982 0.0005895 818.949406064214 822.956110280867 116.05 0.82065 116.05 115.86 116.68 -7.6294E-06 138 23 8 0 0 0 6.4395E-05 1 67124 61.212 61.212 1 2.5191 2.0392 0 24068000 7739600 16329000 14593 1481 5567 5699 22754 22754 GVNLVINYDFPTSSVEYIHR 20 0 1 Unmodified _GVNLVINYDFPTSSVEYIHR_ 0 0 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.7344 3 775.062092 2322.16445 67884.31 0.93408 0.00072397 0.71891 0.0005572 1.653 0.0012812 775.397640141364 778.398326904544 124.02 0.43056 124.02 123.86 124.29 0 93 17 8 0 0 0 0.04908 1 74221 11.249 11.249 1 1.0696 0.92035 0 7531500 3430800 4100600 14594 2126 5568 5700 22755 22755 GVNTFSPEGR 10 0 1 Unmodified _GVNTFSPEGR_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.2665 2 532.261988 1062.50942 82186.49 0.36633 0.00019498 0.47827 0.00025457 0.8446 0.00044955 532.262608690703 537.265961536053 34.254 0.77265 34.254 33.884 34.657 0 215 66 5 0 0 0 0.00030602 2 17034 90.601 85.91 1 2.0303 2.1055 0 22735000 8489100 14246000 14595 595 5569 5701 22756;22757 22756 GVNTFSPEGR 10 0 1 Unmodified _GVNTFSPEGR_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.2626 2 532.261988 1062.50942 81846.23 0.4557 0.00024255 0.45674 0.0002431 0.91244 0.00048566 532.26258749437 537.265986336448 33.668 0.58313 33.668 33.321 33.904 0 157 47 4 0 0 0 0.00027702 1 16846 93.649 93.649 1 1.8531 2.0237 0 38549000 13147000 25402000 14596 595 5569 5701 22758 22758 GVNTFSPEGR 10 0 1 Unmodified _GVNTFSPEGR_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.2665 2 532.261988 1062.50942 83005.71 0.31073 0.00016539 0.36027 0.00019176 0.671 0.00035715 532.262362457867 537.266260115569 38.963 0.43797 38.963 38.759 39.197 0 110 37 4 0 0 0 0.021656 2 17702 46.158 46.158 1 1.5449 1.3405 0 2431000 1124900 1306100 14597 595 5569 5701 22759;22760 22759 GVNTFSPEGR 10 0 1 Unmodified _GVNTFSPEGR_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.2617 2 532.261988 1062.50942 84314.16 0.24192 0.00012876 0.6422 0.00034182 0.88412 0.00047058 532.262442156803 537.266204655296 39.036 0.49402 39.036 38.817 39.311 0 118 38 5 0 0 0 0.042728 1 17300 44.203 44.203 1 1.7085 1.5392 0 2236500 861460 1375100 14598 595 5569 5701 22761 22761 GVPQQIEVAR 10 0 1 Unmodified _GVPQQIEVAR_ 0 0 0 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.8093 2 548.809105 1095.60366 82151.34 0.7302 0.00040074 -0.12926 -7.0937E-05 0.60095 0.00032981 548.808983548673 553.813167281011 48.236 0.68147 48.236 48.003 48.685 0 198 53 7 0 0 0 0.0011713 1 26354 75.043 39.599 1 1.6386 1.6762 0 34035000 13446000 20589000 14599 245 5570 5702 22762 22762 GVPQQIEVAR 10 0 1 Unmodified _GVPQQIEVAR_ 0 0 0 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.8137 2 548.809105 1095.60366 NaN NaN NaN 0.15187 8.3347E-05 NaN NaN NaN NaN 47.082 0.41531 47.082 46.853 47.269 0 0 0 0 0.0056524 1 26049 67.897 45.66 1 NaN NaN 0 30836000 0 30836000 14600 245 5570 5702 22763 22763 GVPTGFILPIR 11 0 1 Unmodified _GVPTGFILPIR_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809;V9GYY3 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8616 2 585.355691 1168.69683 80979.45 0.57737 0.00033797 0.19163 0.00011217 0.769 0.00045014 585.355775442853 590.359862851846 115.34 0.60207 115.34 115.05 115.65 0 156 39 6 0 0 0 0.0051516 1 73231 56.729 48.311 1 1.7274 1.8134 0 11900000 4066800 7833500 14601 196 5571 5703 22764 22764 GVPTGFILPIR 11 0 1 Unmodified _GVPTGFILPIR_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809;V9GYY3 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.3598 2 585.355691 1168.69683 80527.81 0.67229 0.00039353 0.044168 2.5854E-05 0.71645 0.00041938 585.355614064183 590.359769542976 114.66 0.57315 114.66 114.36 114.94 0 152 35 6 0 0 0 0.015772 1 74495 46.158 39.987 1 1.6544 1.6427 0 16101000 6114000 9986800 14602 196 5571 5703 22765 22765 GVPTGFILPIR 11 0 1 Unmodified _GVPTGFILPIR_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809;V9GYY3 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 590.3594 2 585.355691 1168.69683 79730.77 0.64347 0.00037666 -0.13911 -8.143E-05 0.50436 0.00029523 585.355512677703 590.359699514113 126.95 0.59126 126.95 126.6 127.19 -7.6294E-06 92 24 6 0 0 0 0.015772 1 76398 46.158 45.528 1 1.0287 0.89357 0 2239900 1192600 1047300 14603 196 5571 5703 22766 22766 GVPTGFILPIR 11 0 1 Unmodified _GVPTGFILPIR_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809;V9GYY3 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.3601 2 585.355691 1168.69683 81596.82 0.53207 0.00031145 -0.0088694 -5.1918E-06 0.5232 0.00030626 585.355595018025 590.359752439548 126.74 0.53531 126.74 126.4 126.93 -7.6294E-06 85 23 6 0 0 0 0.013734 1 75331 47.198 47.198 1 0.86018 0.77415 0 2246300 957150 1289100 14604 196 5571 5703 22767 22767 GVPVSEAECTAMGLR 15 0 1 Oxidation (M) _GVPVSEAECTAM(ox)GLR_ GVPVSEAECTAM(1)GLR GVPVSEAECTAM(51.01)GLR 0 1 0 Q5VT66;F6V6Z1;Q969Z3 Q5VT66;Q969Z3 Q5VT66 MARC1;MARC2 Mitochondrial amidoxime-reducing component 1;Mitochondrial amidoxime reducing component 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.8784 2 796.87399 1591.73343 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.054 1 64.054 63.554 64.554 0 0 0 0 0.0032703 1 37689 51.013 36.041 1 14605 1831;1956 5572 5704 22768 22768 1689 GVQDIVVGEGTHFLIPWVQK 20 1 0 Unmodified _GVQDIVVGEGTHFLIPWVQK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.0746 3 741.403789 2221.18954 70380.77 1.0018 0.00074276 -0.1734 -0.00012856 0.82843 0.0006142 741.737984591502 744.409214619665 125.26 1.1338 125.26 124.74 125.87 -7.6294E-06 563 75 10 0 0 0 2.9089E-05 2 81230 44.238 44.238 1 1.1602 1.2572 0 44153000 18871000 25282000 14606 730 5573 5705 22769;22770 22769 GVQDIVVGEGTHFLIPWVQK 20 1 0 Unmodified _GVQDIVVGEGTHFLIPWVQK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.7388 3 741.403789 2221.18954 70279.38 1.1604 0.00086033 -0.12117 -8.9838E-05 1.0392 0.0007705 741.738012155413 744.409345452312 124.71 1.0343 124.71 124.21 125.24 -7.6294E-06 533 70 11 0 0 0 0.00030071 2 82904 35.625 35.625 1 1.1993 1.351 0 58910000 28847000 30063000 14607 730 5573 5705 22771;22772 22772 GVQDIVVGEGTHFLIPWVQK 20 1 0 Unmodified _GVQDIVVGEGTHFLIPWVQK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1115.6093 2 1111.60205 2221.18954 58586.91 0.58184 0.00064678 -0.051769 -5.7547E-05 0.53007 0.00058923 1112.10351949685 1116.11102493357 124.75 0.64065 124.75 124.39 125.03 0 283 43 8 0 0 0 0.0044419 1 82845 32.734 32.734 1 1.1877 1.2388 0 19164000 9105300 10058000 14608 730 5573 5705 22773 22773 GVQDIVVGEGTHFLIPWVQK 20 1 0 Unmodified _GVQDIVVGEGTHFLIPWVQK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.0764 3 741.403789 2221.18954 68275.04 1.0561 0.00078301 -0.60018 -0.00044497 0.45594 0.00033803 741.738003207946 744.408882464394 134.49 0.4115 134.49 134.39 134.8 0 38 12 7 0 0 0 2.1371E-06 1 82145 52.318 52.318 1 3.7735 3.0841 0 34023000 9024600 24999000 14609 730 5573 5705 22774 22774 GVQDIVVGEGTHFLIPWVQK 20 1 0 Unmodified _GVQDIVVGEGTHFLIPWVQK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.4099 3 741.403789 2221.18954 70247.38 0.73889 0.00054781 -0.51534 -0.00038208 0.22354 0.00016573 741.737418912412 744.408901032578 134.46 0.16771 134.46 134.36 134.53 0 31 5 8 0 0 0 0.002068 1 81223 25.916 25.916 1 2.3914 2.0127 0 52072000 16063000 36010000 14610 730 5573 5705 22775 22775 GVQLLLSER 9 0 1 Unmodified _GVQLLLSER_ 0 0 0 Q9BRQ8 Q9BRQ8 Q9BRQ8 AIFM2 Apoptosis-inducing factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.8044 2 507.800749 1013.58694 NaN NaN NaN -1.2213 -0.00062016 NaN NaN NaN NaN 76.728 0.43521 76.728 76.483 76.918 7.6294E-06 0 0 0 0.042159 1 46344 49.554 26.483 1 NaN NaN 0 4588900 0 4588900 14611 1998 5574 5706 22776 22776 GVQLQTHPNVDK 12 1 0 Unmodified _GVQLQTHPNVDK_ 0 0 0 B0YIW5;Q6MZV5;B0YIW6;P48444 B0YIW5 B0YIW5 ARCN1;DKFZp686M09245 Coatomer subunit delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3616 2 668.354408 1334.69426 NaN NaN NaN 0.67943 0.0004541 NaN NaN NaN NaN 27.287 0.1329 27.287 27.167 27.3 0 0 0 0 8.9426E-14 1 12568 128.81 90.035 1 NaN NaN 0 3803000 0 3803000 14612 810 5575 5707 22777 22777 GVQYLNEIK 9 1 0 Unmodified _GVQYLNEIK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.2996 2 532.292756 1062.57096 83561.35 0.42217 0.00022472 -0.074653 -3.9737E-05 0.34752 0.00018498 532.292460921376 536.299721204482 63.582 1.0664 63.582 62.937 64.003 3.8147E-06 419 104 5 0 0 0 2.2158E-05 1 36243 116.37 70.653 1 3.0688 3.4263 0 62665000 16310000 46355000 14613 1478 5576 5708 22778 22778 GVQYLNEIK 9 1 0 Unmodified _GVQYLNEIK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.2999 2 532.292756 1062.57096 83672.97 0.49272 0.00026227 -0.2842 -0.00015128 0.20852 0.00011099 532.292203640157 536.299614017597 62.166 1.0619 62.166 61.622 62.684 0 395 98 6 0 0 0 1.6045E-05 1 36396 121.62 75.901 1 3.2184 3.6273 0 60430000 14853000 45577000 14614 1478 5576 5708 22779 22779 GVQYLNEIK 9 1 0 Unmodified _GVQYLNEIK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.2993 2 532.292756 1062.57096 NaN NaN NaN -1.0657 -0.00056728 NaN NaN NaN NaN 73.331 0.8204 73.331 73.033 73.854 0 0 0 0 0.0063465 1 38687 72.485 26.767 1 NaN NaN 0 3598600 0 3598600 14615 1478 5576 5708 22780 22780 GVQYLNEIK 9 1 0 Unmodified _GVQYLNEIK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.2989 2 532.292756 1062.57096 82903.63 0.4472 0.00023804 -0.60096 -0.00031989 -0.15376 -8.1843E-05 532.292636632057 536.298907257853 73.759 0.81516 73.759 73.476 74.291 0 239 59 5 0 0 0 0.0017345 1 38232 81.548 35.83 1 2.0443 1.6725 0 4822500 1596500 3226000 14616 1478 5576 5708 22781 22781 GVSAVVVGADR 11 0 1 Unmodified _GVSAVVVGADR_ 0 0 0 Q9BV20 Q9BV20 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.2918 2 515.288005 1028.56146 NaN NaN NaN -0.41301 -0.00021282 NaN NaN NaN NaN 44.721 0.36638 44.721 44.589 44.956 0 0 0 0 0.001131 1 24475 85.533 62.793 1 NaN NaN 0 7888100 0 7888100 14617 2006 5577 5709 22782 22782 GVSFTFGADVVSK 13 1 0 Unmodified _GVSFTFGADVVSK_ 0 0 0 V9HW04;P62140;B4DJ75;B7ZB67 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.3405 2 657.340435 1312.66632 75002.48 0.82147 0.00053999 0.084817 5.5754E-05 0.90629 0.00059574 657.340432525458 661.347570277158 97.467 1.3044 97.467 97.053 98.358 0 547 110 7 0 0 0 1.8152E-14 2 59468 137.17 123.16 1 1.1179 1.2708 0 165230000 83621000 81613000 14618 1633 5578 5710 22783;22784 22784 GVSFTFGADVVSK 13 1 0 Unmodified _GVSFTFGADVVSK_ 0 0 0 V9HW04;P62140;B4DJ75;B7ZB67 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.3408 2 657.340435 1312.66632 74542.33 0.94857 0.00062354 -0.11244 -7.3913E-05 0.83613 0.00054962 657.340287219122 661.347426569497 96.78 1.3668 96.78 96.383 97.749 7.6294E-06 444 110 7 0 0 0 1.1843E-09 2 60353 124.1 124.1 1 1.0762 1.2199 0 137970000 61443000 76528000 14619 1633 5578 5710 22785;22786 22786 GVSFTFGADVVSK 13 1 0 Unmodified _GVSFTFGADVVSK_ 0 0 0 V9HW04;P62140;B4DJ75;B7ZB67 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.3409 2 657.340435 1312.66632 75028.59 0.84138 0.00055307 0.50448 0.00033162 1.3459 0.00088469 657.340678634171 661.347872424108 110.32 0.79727 110.32 110.05 110.84 -7.6294E-06 184 40 6 0 0 0 6.8805E-09 2 63686 118.28 104.07 1 2.0586 1.7038 0 44139000 13690000 30449000 14620 1633 5578 5710 22787;22788 22788 GVSFTFGADVVSK 13 1 0 Unmodified _GVSFTFGADVVSK_ 0 0 0 V9HW04;P62140;B4DJ75;B7ZB67 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.3417 2 657.340435 1312.66632 75303.63 0.78548 0.00051632 0.53179 0.00034957 1.3173 0.00086589 657.340712805835 661.34784176873 110.16 1.0777 110.16 109.91 110.99 0 199 57 5 0 0 0 1.475E-06 2 62675 110.84 110.84 1 2.0635 1.7214 0 41816000 13014000 28802000 14621 1633 5578 5710 22789;22790 22790 GVSFTFGAEVVAK 13 1 0 Unmodified _GVSFTFGAEVVAK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3 P62136;A0A024RBP2 P62136 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.3583 2 656.350803 1310.68705 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.8 1 100.8 100.3 101.3 0 0 0 0 0.00066058 1 61851 81.865 55.927 1 14622 1632;343 5579 5711 22791 22791 GVSFTFGAEVVAK 13 1 0 Unmodified _GVSFTFGAEVVAK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3 P62136;A0A024RBP2 P62136 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3583 2 656.350803 1310.68705 75277.6 0.74709 0.00049036 0.47706 0.00031312 1.2242 0.00080347 656.350783723477 660.358350467794 99.544 0.96133 99.544 99.326 100.29 0 213 77 4 0 0 0 0.00013042 1 62302 90.05 82.922 1 1.7495 1.77 0 13077000 4499100 8577800 14623 1632;343 5579 5711 22792 22792 GVSFTFGAEVVAK 13 1 0 Unmodified _GVSFTFGAEVVAK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3 P62136;A0A024RBP2 P62136 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3593 2 656.350803 1310.68705 NaN NaN NaN 0.12266 8.0507E-05 NaN NaN NaN NaN 100.35 0.32761 100.35 100.24 100.57 7.6294E-06 0 0 0 0.00076991 1 63080 79.693 64.542 1 NaN NaN 0 6431500 0 6431500 14624 1632;343 5579 5711 22793 22793 GVSFYEVPPHLFAVADTVYR 20 0 1 Unmodified _GVSFYEVPPHLFAVADTVYR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.7234 3 756.388028 2266.14225 70864.42 0.92951 0.00070307 0.6366 0.00048152 1.5661 0.0011846 756.722500246471 760.05873161901 121.77 0.9225 121.77 121.19 122.12 0 259 60 6 0 0 0 0.0023425 1 78466 24.407 24.407 1 1.1002 1.1084 0 9413300 5257900 4155400 14625 1088 5580 5712 22794 22794 GVSFYEVPPHLFAVADTVYR 20 0 1 Unmodified _GVSFYEVPPHLFAVADTVYR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.7254 3 756.388028 2266.14225 70048.8 0.88048 0.00066599 0.58281 0.00044083 1.4633 0.0011068 756.722505802712 760.058631776272 120.83 1.1449 120.83 120.07 121.21 7.6294E-06 347 77 7 0 0 0 9.1232E-07 3 79757 63.184 63.184 1 1.1548 1.1478 0 16225000 7632400 8592800 14626 1088 5580 5712 22795;22796;22797 22795 GVSFYEVPPHLFAVADTVYR 20 0 1 Unmodified _GVSFYEVPPHLFAVADTVYR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 759.8734 3 756.388028 2266.14225 69483.91 1.2362 0.00093505 0.97002 0.00073371 2.2062 0.0016688 756.7228009245 760.058903556141 132.73 0.69244 132.73 132.34 133.03 0 134 31 7 0 0 0 0.027887 1 80658 25.207 25.207 1 2.0077 1.719 0 8656000 2679200 5976800 14627 1088 5580 5712 22798 22798 GVSTLCEEHVEPETTLPAR 19 0 1 Unmodified _GVSTLCEEHVEPETTLPAR_ 0 0 0 Q1ED39 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.0149 3 709.012521 2124.01573 NaN NaN NaN -0.02902 -2.0576E-05 NaN NaN NaN NaN 67.86 0.34277 67.86 67.681 68.024 0 0 0 0 0.0005641 1 39314 54.103 45.503 1 NaN NaN 0 6052400 6052400 0 14628 1775 5581 5713 22799 22799 GVSTLCEEHVEPETTLPAR 19 0 1 Unmodified _GVSTLCEEHVEPETTLPAR_ 0 0 0 Q1ED39 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.3465 3 709.012521 2124.01573 NaN NaN NaN -0.57025 -0.00040431 NaN NaN NaN NaN 66.733 0.31918 66.733 66.533 66.852 0 0 0 0 9.6526E-05 1 39497 51.819 43.219 1 NaN NaN 0 11476000 11476000 0 14629 1775 5581 5713 22800 22800 GVSTLCEEHVEPETTLPAR 19 0 1 Unmodified _GVSTLCEEHVEPETTLPAR_ 0 0 0 Q1ED39 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.3497 3 709.012521 2124.01573 72698.09 0.58726 0.00041638 0.44958 0.00031875 1.0368 0.00073513 709.347444554787 712.683263641989 77.943 0.46981 77.943 77.734 78.204 0 119 29 5 0 0 0 0.012355 1 41732 21.987 21.987 1 1.7525 1.4782 0 4736900 1789100 2947800 14630 1775 5581 5713 22801 22801 GVSTLCEEHVEPETTLPAR 19 0 1 Unmodified _GVSTLCEEHVEPETTLPAR_ 0 0 0 Q1ED39 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.0134 3 709.012521 2124.01573 72094.63 0.63238 0.00044836 0.55312 0.00039217 1.1855 0.00084053 709.347523212354 712.683282424374 78.175 0.37988 78.175 77.997 78.376 0 118 24 6 0 0 0 0.001481 1 41090 32.156 32.156 1 1.8153 1.5813 0 4261500 1579900 2681600 14631 1775 5581 5713 22802 22802 GVTFLFPIQAK 11 1 0 Unmodified _GVTFLFPIQAK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8626 2 610.855524 1219.69649 78320.87 0.61119 0.00037335 -0.0074313 -4.5395E-06 0.60376 0.00036881 610.855478449015 614.86252763427 116.2 0.97904 116.2 115.77 116.75 7.6294E-06 393 62 10 0 0 0 1.4299E-08 2 74013 123.16 123.16 1 1.0918 1.248 0 183090000 84521000 98564000 14632 2065 5582 5714 22803;22804 22804 GVTFLFPIQAK 11 1 0 Unmodified _GVTFLFPIQAK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.8632 2 610.855524 1219.69649 78187.52 0.67661 0.00041331 0.034796 2.1255E-05 0.7114 0.00043456 610.855497750729 614.862558038573 115.61 0.88307 115.61 115.21 116.09 0 351 57 10 0 0 0 2.2687E-05 3 75364 103.87 103.87 1 1.1566 1.344 0 230890000 109330000 121570000 14633 2065 5582 5714 22805;22806;22807 22806 GVTFLFPIQAK 11 1 0 Unmodified _GVTFLFPIQAK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.8629 2 610.855524 1219.69649 77313.08 0.69271 0.00042315 -0.044693 -2.7301E-05 0.64802 0.00039585 610.855545696875 614.862523959441 127.84 1.115 127.84 127.46 128.58 0 239 44 10 0 0 0 0.00028904 2 77278 88.948 88.948 1 1.1813 1.011 0 71806000 32709000 39097000 14634 2065 5582 5714 22808;22809 22809 GVTFLFPIQAK 11 1 0 Unmodified _GVTFLFPIQAK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.8636 2 610.855524 1219.69649 77534.72 0.60908 0.00037206 0.064074 3.914E-05 0.67315 0.0004112 610.855640378433 614.862560610648 127.61 1.2331 127.61 127.19 128.42 0 243 51 10 0 0 0 0.00043239 1 75832 78.934 78.934 1 1.2136 1.0342 0 90013000 43410000 46603000 14635 2065 5582 5714 22810 22810 GVTFNVTTVDTK 12 1 0 Unmodified _GVTFNVTTVDTK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3448 2 641.337892 1280.66123 NaN NaN NaN 0.24035 0.00015414 NaN NaN NaN NaN 74.388 0.64187 74.388 74.166 74.808 0 0 0 0 4.3216E-13 1 43633 120.65 105.5 1 NaN NaN 0 23560000 0 23560000 14636 1362 5583 5715 22811 22811 GVTFNVTTVDTK 12 1 0 Unmodified _GVTFNVTTVDTK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.3378 2 641.337892 1280.66123 74936.16 0.57655 0.00036976 1.038 0.0006657 1.6145 0.0010355 641.337068129411 645.345437048561 85.088 0.64494 85.088 84.827 85.472 0 181 35 8 0 0 0 0.021483 2 46492 38.634 34.339 1 1.4692 1.1479 0 3813400 1412800 2400600 14637 1362 5583 5715 22812;22813 22813 GVTFNVTTVDTK 12 1 0 Unmodified _GVTFNVTTVDTK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.3448 2 641.337892 1280.66123 74642.77 0.67585 0.00043345 -0.1241 -7.9592E-05 0.55175 0.00035386 641.336792233095 645.3452694342 85.212 0.67496 85.212 84.879 85.554 0 137 41 5 0 0 0 0.00024233 1 45722 73.885 69.839 1 1.3318 1.0405 0 3681100 1797800 1883300 14638 1362 5583 5715 22814 22814 GVTIASGGVLPNIHPELLAK 20 1 0 Unmodified _GVTIASGGVLPNIHPELLAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.0521 3 662.717597 1985.13096 72889.9 0.72298 0.00047913 -0.77703 -0.00051495 -0.054059 -3.5826E-05 663.051604658762 665.388491559748 110.03 1.0899 110.03 109.56 110.65 0 743 80 13 0 0 0 6.632E-07 2 68700 69.122 69.122 1 1.0526 1.2831 0 2903200000 1422200000 1481000000 14639 1401 5584 5716 22815;22816 22815 GVTIASGGVLPNIHPELLAK 20 1 0 Unmodified _GVTIASGGVLPNIHPELLAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 994.076 2 993.572757 1985.13096 61532.23 0.38487 0.00038239 0.25862 0.00025696 0.64349 0.00063935 994.074483097451 998.081505175093 109.97 0.80968 109.97 109.64 110.45 0 473 57 11 0 0 0 1.5955E-23 2 68786 166.6 166.6 1 1.068 1.2734 0 695300000 332690000 362620000 14640 1401 5584 5716 22817;22818 22818 GVTIASGGVLPNIHPELLAK 20 1 0 Unmodified _GVTIASGGVLPNIHPELLAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.0524 3 662.717597 1985.13096 73660.88 0.69968 0.00046369 -0.43423 -0.00028777 0.26545 0.00017592 663.052014531099 665.388816074007 109.22 1.3206 109.22 108.91 110.23 0 687 88 13 0 0 0 2.4335E-09 2 69902 89.859 89.859 1 1.052 1.2459 0 2656000000 1289900000 1366100000 14641 1401 5584 5716 22819;22820 22820 GVTIASGGVLPNIHPELLAK 20 1 0 Unmodified _GVTIASGGVLPNIHPELLAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 993.5741 2 993.572757 1985.13096 61632.02 0.52429 0.00052092 -0.018718 -1.8598E-05 0.50557 0.00050233 994.074186703656 997.579812041454 109.21 0.79483 109.21 108.97 109.76 -7.6294E-06 445 55 12 0 0 0 1.5818E-124 2 69944 300.51 300.51 1 1.067 1.2577 0 636790000 305700000 331090000 14642 1401 5584 5716 22821;22822 22822 GVTIASGGVLPNIHPELLAK 20 1 0 Unmodified _GVTIASGGVLPNIHPELLAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 993.5734 2 993.572757 1985.13096 60992.88 0.28639 0.00028455 -0.21618 -0.00021479 0.070207 6.9756E-05 994.074045431727 998.080920382647 120.67 0.54604 120.67 120.46 121.01 0 238 25 12 0 0 0 2.6481E-23 2 71604 153.7 153.7 1 1.1506 1.0293 0 493090000 227160000 265930000 14643 1401 5584 5716 22823;22824 22824 GVTIASGGVLPNIHPELLAK 20 1 0 Unmodified _GVTIASGGVLPNIHPELLAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.3895 3 662.717597 1985.13096 NaN NaN NaN -1.4364 -0.0009519 NaN NaN NaN NaN 120.66 1.1409 120.66 120.4 121.54 0 0 0 0 2.1357E-14 1 71568 101.49 87.857 1 NaN NaN 0 808110000 0 808110000 14644 1401 5584 5716 22825 22825 GVTIASGGVLPNIHPELLAK 20 1 0 Unmodified _GVTIASGGVLPNIHPELLAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.718 3 662.717597 1985.13096 NaN NaN NaN 0.84936 0.00056289 NaN NaN NaN NaN 120.67 1.1054 120.67 120.4 121.51 -7.6294E-06 0 0 0 1.357E-24 1 71571 89.859 77.341 1 NaN NaN 0 718600000 718600000 0 14645 1401 5584 5716 22826 22826 GVTIASGGVLPNIHPELLAK 20 1 0 Unmodified _GVTIASGGVLPNIHPELLAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 994.075 2 993.572757 1985.13096 60993.36 0.43172 0.00042895 -0.23103 -0.00022954 0.2007 0.00019941 994.074068046604 998.080945617868 120.38 0.70593 120.38 120.14 120.85 0 357 37 14 0 0 0 1.4669E-17 2 70495 136.6 136.6 1 1.1174 0.9726 0 350080000 164710000 185380000 14646 1401 5584 5716 22827;22828 22828 GVTIASGGVLPNIHPELLAK 20 1 0 Unmodified _GVTIASGGVLPNIHPELLAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.3896 3 662.717597 1985.13096 NaN NaN NaN -1.5355 -0.0010176 NaN NaN NaN NaN 120.38 1.0955 120.38 120.1 121.19 -7.6294E-06 0 0 0 0.0037774 1 70437 37.552 32.123 1 NaN NaN 0 699080000 0 699080000 14647 1401 5584 5716 22829 22829 GVTIIGPATVGGIK 14 1 0 Unmodified _GVTIIGPATVGGIK_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;Q8N9C4 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.8984 2 641.890095 1281.76564 78042.64 0.97094 0.00062323 0.28706 0.00018426 1.258 0.0008075 641.889967686061 645.897464521999 93.885 0.53984 93.885 93.695 94.235 0 135 49 4 0 0 0 0.00046474 1 57023 60.641 60.641 1 2.1363 2.1928 0 14453000 5172000 9280800 14648 89 5585 5717 22830 22830 GVTIIGPATVGGIK 14 1 0 Unmodified _GVTIIGPATVGGIK_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;Q8N9C4 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.8973 2 641.890095 1281.76564 80328.11 0.83019 0.00053289 -0.22485 -0.00014433 0.60534 0.00038856 642.391347248396 645.897204435936 93.117 0.5543 93.117 92.836 93.39 0 112 48 4 0 0 0 0.00018967 1 57684 70.808 70.808 1 1.8675 1.8814 0 13419000 6051600 7367500 14649 89 5585 5717 22831 22831 GVTIKPTVDDD 11 1 0 Unmodified _GVTIKPTVDDD_ 0 0 1 P41091;Q2VIR3 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.304 2 580.295693 1158.57683 80401.2 0.80973 0.00046988 0.27453 0.00015931 1.0843 0.00062919 580.295517634724 584.303238765006 46.743 0.59367 46.743 46.395 46.989 0 194 50 7 0 0 0 4.9941E-22 1 25795 164.68 153.09 1 1.6227 1.638 0 28375000 9247100 19128000 14650 1559 5586 5718 22832 22832 GVTIPYRPK 9 1 1 Unmodified _GVTIPYRPK_ 0 0 1 H3BRU6;F8VZX2;B4DRD7;F8VRH0;Q15366;B4DLC0;H3BSS4 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.8168 2 515.805834 1029.59712 84566.69 0.63016 0.00032504 0.093441 4.8197E-05 0.7236 0.00037324 515.805791987324 524.817036281963 42.084 0.68513 42.084 41.818 42.503 0 182 50 7 0 0 0 0.040257 1 22197 61.962 53.19 1 2.5518 3.079 0 139900000 43099000 96802000 14651 1263;1760 5587 5719 22833 22833 GVTIPYRPK 9 1 1 Unmodified _GVTIPYRPK_ 0 0 1 H3BRU6;F8VZX2;B4DRD7;F8VRH0;Q15366;B4DLC0;H3BSS4 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.817 2 515.805834 1029.59712 83692.28 0.60683 0.00031301 0.18689 9.6399E-05 0.79372 0.00040941 515.805818488003 524.817076111969 41.183 0.9057 41.183 40.727 41.633 0 263 73 5 0 0 0 0.032908 1 22028 65.038 54.165 1 2.2697 2.6744 0 97497000 29824000 67673000 14652 1263;1760 5587 5719 22834 22834 GVTLGFR 7 0 1 Unmodified _GVTLGFR_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8;Q2NKY6 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 375.2194 2 375.218863 748.423173 96977.52 0.17531 6.578E-05 -0.15489 -5.8117E-05 0.020423 7.6631E-06 375.218734233921 380.222849193831 59.832 0.81806 59.832 59.476 60.295 0 326 68 8 0 0 0 0.0096638 2 33956 126.16 68.704 1 0.86685 1.0265 0 406210000 229860000 176340000 14653 1537 5588 5720 22835;22836 22835 GVTLGFR 7 0 1 Unmodified _GVTLGFR_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8;Q2NKY6 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 375.2187 2 375.218863 748.423173 96985.1 0.46383 0.00017404 -0.0094493 -3.5456E-06 0.45438 0.00017049 375.218791342325 380.222919871466 58.557 0.73876 58.557 58.3 59.039 3.8147E-06 301 66 8 0 0 0 0.0012452 2 33975 137.44 69.407 1 0.92061 1.076 0 586850000 301670000 285170000 14654 1537 5588 5720 22837;22838 22838 GVTLGFR 7 0 1 Unmodified _GVTLGFR_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8;Q2NKY6 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 380.2228 2 375.218863 748.423173 97944.78 0.083358 3.1278E-05 0.04928 1.8491E-05 0.13264 4.9768E-05 375.218811419565 380.222915106552 68.528 0.95168 68.528 68.23 69.181 0 330 70 7 0 0 0 0.051188 2 35700 54.525 40.112 1 1.034 0.8789 0 34264000 16392000 17872000 14655 1537 5588 5720 22839;22840 22839 GVTLGFR 7 0 1 Unmodified _GVTLGFR_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8;Q2NKY6 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 380.2228 2 375.218863 748.423173 97549.45 0.020053 7.5241E-06 0.09969 3.7406E-05 0.11974 4.493E-05 375.2188102685 380.222925771098 68.822 1.0298 68.822 68.476 69.506 0 331 71 7 0 0 0 0.040059 1 35092 59.641 42.714 1 1.0148 0.88524 0 26510000 12761000 13749000 14656 1537 5588 5720 22841 22841 GVTNDQVDPSVDVLK 15 1 0 Unmodified _GVTNDQVDPSVDVLK_ 0 0 0 Q9Y2P8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.9091 2 793.407034 1584.79952 68271.27 0.89612 0.00071099 0.1978 0.00015694 1.0939 0.00086792 793.406954033593 797.414240537267 79.71 0.71767 79.71 79.426 80.143 0 332 62 8 0 0 0 3.594E-08 2 47185 111.96 98.298 1 0.9067 1.0281 0 94033000 47532000 46501000 14657 2125 5589 5721 22842;22843 22843 GVTNDQVDPSVDVLK 15 1 0 Unmodified _GVTNDQVDPSVDVLK_ 0 0 0 Q9Y2P8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.407 2 793.407034 1584.79952 68636.54 0.8712 0.00069122 -0.02481 -1.9684E-05 0.84639 0.00067153 793.406852016781 797.4139246061 78.752 0.82541 78.752 78.429 79.254 0 401 71 8 0 0 0 2.8603E-10 3 47689 117.86 104.2 1 0.85492 0.95856 0 113220000 61588000 51633000 14658 2125 5589 5721 22844;22845;22846 22845 GVTNDQVDPSVDVLK 15 1 0 Unmodified _GVTNDQVDPSVDVLK_ 0 0 0 Q9Y2P8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.4069 2 793.407034 1584.79952 67950.63 0.83173 0.0006599 -0.21208 -0.00016827 0.61965 0.00049164 793.406830113024 797.413935965021 91.204 0.8037 91.204 90.913 91.716 0 348 54 10 0 0 0 1.2034E-10 2 50597 122.18 113.77 1 1.3445 1.0913 0 26865000 10672000 16192000 14659 2125 5589 5721 22847;22848 22848 GVTNDQVDPSVDVLK 15 1 0 Unmodified _GVTNDQVDPSVDVLK_ 0 0 0 Q9Y2P8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.4073 2 793.407034 1584.79952 68304.59 0.62306 0.00049434 -0.15667 -0.0001243 0.46639 0.00037004 793.406834425175 797.413996197503 91.128 0.79383 91.128 90.828 91.622 0 333 54 9 0 0 0 1.2526E-05 3 49719 91.093 84.434 1 1.3707 1.1065 0 23426000 10152000 13274000 14660 2125 5589 5721 22849;22850;22851 22850 GVTSILPVLR 10 0 1 Unmodified _GVTSILPVLR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.8348 2 527.834591 1053.65463 86052.73 0.43896 0.0002317 -0.37629 -0.00019862 0.062671 3.308E-05 527.834477311677 532.838634713962 108.13 0.61356 108.13 107.84 108.45 0 174 46 6 0 0 0 0.013553 2 67396 49.418 46.305 1 1.8507 1.9381 0 10875000 3495800 7379500 14661 1205 5590 5722 22852;22853 22853 GVTSILPVLR 10 0 1 Unmodified _GVTSILPVLR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.8393 2 527.834591 1053.65463 84902.48 0.62103 0.0003278 -0.25619 -0.00013523 0.36484 0.00019257 527.83443569846 532.838525655348 107.4 0.62603 107.4 107.05 107.67 0 147 42 5 0 0 0 0.0051169 2 68455 60.59 48.635 1 1.9969 2.0146 0 10398000 3966600 6431300 14662 1205 5590 5722 22854;22855 22854 GVTYLFPIQVK 11 1 0 Unmodified _GVTYLFPIQVK_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;B4DED6;Q53FI9 B4DW97 B4DW97 DDX50 ATP-dependent RNA helicase DDX50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.8763 2 632.868631 1263.72271 75761.95 0.68671 0.0004346 0.42219 0.00026719 1.1089 0.00070179 632.868753523208 636.875959693844 124.72 0.57581 124.72 124.46 125.04 0 101 25 6 0 0 0 0.033349 1 74705 37.191 37.191 1 1.3974 1.0847 0 3456000 1362500 2093500 14663 416 5591 5723 22856 22856 GVTYLFPIQVK 11 1 0 Unmodified _GVTYLFPIQVK_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;B4DED6;Q53FI9 B4DW97 B4DW97 DDX50 ATP-dependent RNA helicase DDX50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8768 2 632.868631 1263.72271 76125.13 0.76426 0.00048368 -0.070235 -4.445E-05 0.69402 0.00043923 632.868515973126 636.87540485705 124.5 0.4727 124.5 124.28 124.75 0 86 21 6 0 0 0 0.0091505 1 73645 49.536 49.536 1 1.2672 1.0292 0 2885600 1242600 1643100 14664 416 5591 5723 22857 22857 GVVDHLLLR 9 0 1 Unmodified _GVVDHLLLR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.3149 2 511.311284 1020.60801 85293.52 0.45337 0.00023181 -0.59065 -0.00030201 -0.13729 -7.0197E-05 511.311040681732 516.315149764803 78.123 1.1028 78.123 77.749 78.851 0 360 92 7 0 0 0 0.001077 1 46055 90.308 62.604 1 1.2225 1.3205 0 48593000 17705000 30888000 14665 1914 5592 5724 22858 22858 GVVDHLLLR 9 0 1 Unmodified _GVVDHLLLR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 341.2093 3 341.209948 1020.60801 103851.4 -0.066901 -2.2827E-05 -0.03674 -1.2536E-05 -0.10364 -3.5363E-05 341.209920771062 344.545935939285 78.086 1.0733 78.086 77.76 78.833 0 342 89 6 0 0 0 0.0027084 4 46058 60.91 45.972 1 1.3812 1.4129 0 34349000 13526000 20823000 14666 1914 5592 5724 22859;22860;22861;22862 22859 GVVDHLLLR 9 0 1 Unmodified _GVVDHLLLR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 341.2097 3 341.209948 1020.60801 102218.7 -0.28617 -9.7642E-05 0.12869 4.3911E-05 -0.15747 -5.3731E-05 341.209936307482 344.546022536661 76.247 0.73724 76.247 75.946 76.683 0 299 60 7 0 0 0 0.0063362 2 45900 44.753 32.984 1 1.4003 1.6095 0 52928000 23042000 29886000 14667 1914 5592 5724 22863;22864 22864 GVVDHLLLR 9 0 1 Unmodified _GVVDHLLLR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.3116 2 511.311284 1020.60801 87763.42 0.09586 4.9014E-05 -0.48274 -0.00024683 -0.38688 -0.00019782 511.311310203376 516.314528528869 76.242 0.84767 76.242 75.936 76.783 0 309 69 6 0 0 0 1.346E-11 1 46101 152.63 106.2 1 1.0086 1.1656 0 69382000 33015000 36367000 14668 1914 5592 5724 22865 22865 GVVDHLLLR 9 0 1 Unmodified _GVVDHLLLR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.3156 2 511.311284 1020.60801 85285.1 0.34713 0.00017749 -0.048095 -2.4591E-05 0.29903 0.0001529 511.311136360795 516.315340093013 87.254 1.1573 87.254 86.851 88.008 0 293 67 8 0 0 0 0.0074258 1 47768 61.999 41.3 1 1.5812 1.3163 0 22147000 8819400 13328000 14669 1914 5592 5724 22866 22866 GVVDHLLLR 9 0 1 Unmodified _GVVDHLLLR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.3164 2 511.311284 1020.60801 84963.12 0.35237 0.00018017 0.21756 0.00011124 0.56993 0.00029141 511.311233338356 516.315479865223 87.012 1.0717 87.012 86.649 87.721 0 320 64 8 0 0 0 0.0018009 2 46836 80.684 58.724 1 1.6025 1.3624 0 19242000 6935400 12307000 14670 1914 5592 5724 22867;22868 22867 GVVDHLLLR 9 0 1 Unmodified _GVVDHLLLR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 341.21 3 341.209948 1020.60801 102864.1 -0.04478 -1.5279E-05 0.14689 5.0121E-05 0.10211 3.4842E-05 341.209943152258 344.546031174381 87.01 0.93614 87.01 86.695 87.631 0 207 56 6 0 0 0 0.036495 1 46963 23.32 21.275 1 1.5363 1.2643 0 8501300 3312300 5189100 14671 1914 5592 5724 22869 22869 GVVDSEDLPLNISR 14 0 1 Unmodified _GVVDSEDLPLNISR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 B4DMA2;K9JA46 B4DMA2 HSP90AB1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.3972 2 757.39647 1512.77839 69028.49 0.60045 0.00045478 -0.02094 -1.586E-05 0.57951 0.00043892 757.396560143063 762.400522272803 97.202 1.1169 97.202 96.797 97.914 0 639 97 10 0 0 0 1.7289E-37 3 59130 165.07 0 1 2.0897 2.4745 0 400520000 132800000 267720000 14672 379;1348 5593 5725 22870;22871;22872 22871 GVVDSEDLPLNISR 14 0 1 Unmodified _GVVDSEDLPLNISR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 B4DMA2;K9JA46 B4DMA2 HSP90AB1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.3976 2 757.39647 1512.77839 69266.02 0.75879 0.00057471 -0.035529 -2.6909E-05 0.72326 0.0005478 757.396578184787 762.400522347297 96.556 1.2244 96.556 96.101 97.325 0 657 103 10 0 0 0 6.2126E-22 2 60078 149.49 0 1 2.0838 2.4305 0 498430000 176150000 322290000 14673 379;1348 5593 5725 22873;22874 22874 GVVDSEDLPLNISR 14 0 1 Unmodified _GVVDSEDLPLNISR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 B4DMA2;K9JA46 B4DMA2 HSP90AB1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.8997 2 757.39647 1512.77839 69542.95 0.75537 0.00057211 -0.056814 -4.3031E-05 0.69855 0.00052908 757.396583245103 762.400427157591 109.96 1.0113 109.96 109.6 110.62 7.6294E-06 323 53 10 0 0 0 0.00023302 1 63296 64.64 0 1 1.3249 1.1431 0 79587000 34641000 44946000 14674 379;1348 5593 5725 22875 22875 GVVDSEDLPLNISR 14 0 1 Unmodified _GVVDSEDLPLNISR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 B4DMA2;K9JA46 B4DMA2 HSP90AB1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.3969 2 757.39647 1512.77839 70350.61 0.82299 0.00062333 -0.17319 -0.00013117 0.6498 0.00049216 757.396566463028 762.400340357949 109.92 1.0009 109.92 109.51 110.51 0 323 52 9 0 0 0 1.922E-05 3 62369 97.779 0 1 1.3207 1.1527 0 86051000 38354000 47697000 14675 379;1348 5593 5725 22876;22877;22878 22876 GVVEVTHDLQK 11 1 0 Unmodified _GVVEVTHDLQK_ 0 0 0 E9PKH2;B4DN87;A8K259;A0A024R5K8;P50454 E9PKH2 E9PKH2 SERPINH1 Serpin H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8405 2 612.832777 1223.651 78821.98 0.53206 0.00032606 -1.2297 -0.00075361 -0.69765 -0.00042754 613.331940252731 616.839828384899 39.079 0.27823 39.079 38.968 39.246 0 48 21 4 0 0 0 0.00043595 1 20233 78.655 64.518 1 1.1858 1.2116 0 17791000 10891000 6899600 14676 185 5594 5726 22879 22879 GVVGPELYGR 10 0 1 Unmodified _GVVGPELYGR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.7886 2 523.785099 1045.55564 88324.36 0.62435 0.00032703 -0.042278 -2.2144E-05 0.58207 0.00030488 523.784921087311 528.788917249037 59.81 0.36446 59.81 59.613 59.978 -3.8147E-06 97 30 5 0 0 0 1.1985E-05 2 34051 103.74 73.554 1 2.058 2.0891 0 18235000 6099100 12136000 14677 397;1622 5595 5727 22880;22881 22880 GVVGPELYGR 10 0 1 Unmodified _GVVGPELYGR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.7892 2 523.785099 1045.55564 91581.78 0.68735 0.00036002 0.37989 0.00019898 1.0672 0.00055901 523.785014753017 528.789175624598 58.597 0.2926 58.597 58.44 58.732 0 89 28 4 0 0 0 0.0010302 2 34050 77.318 54.275 1 1.7469 1.8391 0 23194000 8806800 14387000 14678 397;1622 5595 5727 22882;22883 22882 GVVPVVMDCESTVQEK 16 1 0 Oxidation (M) _GVVPVVM(ox)DCESTVQEK_ GVVPVVM(1)DCESTVQEK GVVPVVM(67.25)DCESTVQEK 0 1 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.9337 2 896.926419 1791.83829 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.942 1 66.942 66.442 67.442 0 0 0 0 0.00045214 1 38655 67.252 44.373 1 14679 1565 5596 5728 22884 22884 1321 GVVPVVMDCESTVQEK 16 1 0 Oxidation (M) _GVVPVVM(ox)DCESTVQEK_ GVVPVVM(1)DCESTVQEK GVVPVVM(78.32)DCESTVQEK 0 1 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.9268 2 896.926419 1791.83829 NaN NaN NaN 0.079698 7.1483E-05 NaN NaN NaN NaN 65.903 0.31191 65.903 65.8 66.111 0 0 0 0 1.6103E-05 1 38904 78.324 68.135 1 NaN NaN 0 4868100 4868100 0 14680 1565 5596 5728 22885 22885 1321 GVVPVVMDCESTVQEK 16 1 0 Oxidation (M) _GVVPVVM(ox)DCESTVQEK_ GVVPVVM(1)DCESTVQEK GVVPVVM(93.77)DCESTVQEK 0 1 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.9349 2 896.926419 1791.83829 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.939 1 65.939 65.439 66.439 0 0 0 0 8.1551E-06 1 38937 93.766 75.629 1 14681 1565 5596 5728 22886 22886 1321 GVVQELQQAISK 12 1 0 Unmodified _GVVQELQQAISK_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;Q9BW34;A0A087X1X7;Q71RH4;Q9H7G6;E9PQ49;E9PI39;E9PMW7;E9PIZ1;E9PPR1;E9PL12;E9PL71;H0YCK7;E9PN91 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.376 2 650.366984 1298.71942 NaN NaN NaN -2.7647 -0.0017981 NaN NaN NaN NaN 99.711 0.7973 99.711 99.388 100.19 -7.6294E-06 0 0 0 4.3358E-05 1 62436 96.015 70.878 1 NaN NaN 0 8201100 0 8201100 14682 875 5597 5729 22887 22887 GVVQLFNAVQK 11 1 0 Unmodified _GVVQLFNAVQK_ 0 0 0 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.8485 2 601.84823 1201.68191 79067.11 0.79021 0.00047558 0.04721 2.8413E-05 0.83742 0.000504 601.848280041037 605.855370585771 92.837 0.92037 92.837 92.367 93.287 0 438 82 7 0 0 0 7.2771E-10 2 56130 126.52 126.52 1 0.86956 0.98108 0 78323000 43475000 34848000 14683 2134 5598 5730 22888;22889 22889 GVVQLFNAVQK 11 1 0 Unmodified _GVVQLFNAVQK_ 0 0 0 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.8488 2 601.84823 1201.68191 78940.99 0.94532 0.00056894 -0.022593 -1.3597E-05 0.92272 0.00055534 601.848223035768 605.855341036474 91.712 0.86131 91.712 91.438 92.299 0 398 74 7 0 0 0 1.9705E-31 2 56758 186.13 186.13 1 0.87678 0.99585 0 142500000 71256000 71241000 14684 2134 5598 5730 22890;22891 22891 GVVQLFNAVQK 11 1 0 Unmodified _GVVQLFNAVQK_ 0 0 0 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.8485 2 601.84823 1201.68191 77323.92 0.62461 0.00037592 0.25721 0.0001548 0.88182 0.00053072 601.848422791475 605.855406066844 106.28 0.64654 106.28 106 106.65 0 205 33 8 0 0 0 5.4499E-08 1 60648 116.73 116.73 1 1.1723 0.95946 0 35100000 15727000 19373000 14685 2134 5598 5730 22892 22892 GVVQLFNAVQK 11 1 0 Unmodified _GVVQLFNAVQK_ 0 0 0 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.8505 2 601.84823 1201.68191 78195.6 0.65604 0.00039483 0.32876 0.00019787 0.9848 0.0005927 601.848440470063 605.855454235525 106.06 0.74001 106.06 105.7 106.44 -7.6294E-06 234 43 9 0 0 0 0.00035303 1 59603 85.161 85.161 1 1.1752 0.97138 0 32123000 14594000 17528000 14686 2134 5598 5730 22893 22893 GVVSGEVER 9 0 1 Unmodified _GVVSGEVER_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.2497 2 466.245806 930.47706 90662.85 0.18292 8.5286E-05 0.26896 0.0001254 0.45188 0.00021069 466.24588248077 471.249941585272 26.732 0.42311 26.732 26.552 26.975 1.9073E-06 76 20 6 0 0 0 0.043141 1 10214 40.778 5.1599 1 1.1349 0.95052 0 3988300 1825400 2162900 14687 836;1683 5599 5731 22894 22894 GVVTLLSDYEVCK 13 1 0 Unmodified _GVVTLLSDYEVCK_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.8859 2 741.879067 1481.74358 72745.4 0.64968 0.00048199 0.52302 0.00038802 1.1727 0.00087 741.879080743602 746.388555264007 102.49 0.88586 102.49 101.98 102.86 7.6294E-06 250 73 5 0 0 0 0.0025655 2 63001 57.348 57.348 1 1.201 1.2419 0 14694000 6409500 8284800 14688 302 5600 5732 22895;22896 22895 GVVTLLSDYEVCK 13 1 0 Unmodified _GVVTLLSDYEVCK_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.8786 2 741.879067 1481.74358 71828.35 0.5465 0.00040544 0.46291 0.00034343 1.0094 0.00074887 742.38016034537 745.886963635645 101.85 0.89938 101.85 101.21 102.11 0 248 70 6 0 0 0 6.7943E-09 1 64113 140.07 140.07 1 1.2425 1.3198 0 23378000 11385000 11993000 14689 302 5600 5732 22897 22897 GVVTLLSDYEVCK 13 1 0 Unmodified _GVVTLLSDYEVCK_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.8806 2 741.879067 1481.74358 72079.41 0.97952 0.00072668 -0.24388 -0.00018093 0.73564 0.00054575 742.38023388277 745.886253802422 114.71 0.41666 114.71 114.57 114.99 7.6294E-06 79 18 6 0 0 0 0.0052547 1 67032 62.166 62.166 1 1.1983 0.94885 0 4953700 2144600 2809100 14690 302 5600 5732 22898 22898 GVVTLLSDYEVCK 13 1 0 Unmodified _GVVTLLSDYEVCK_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 745.8863 2 741.879067 1481.74358 72005.12 0.77453 0.00057461 -0.51812 -0.00038438 0.25642 0.00019023 741.87845782851 746.388219078917 114.64 0.63673 114.64 114.38 115.02 -7.6294E-06 101 28 7 0 0 0 0.0003075 2 66021 78.513 72.129 1 1.1728 0.9623 0 5152200 2170000 2982200 14691 302 5600 5732 22899;22900 22899 GVWSTLPVNEK 11 1 0 Unmodified _GVWSTLPVNEK_ 0 0 0 J3QR07;Q96MU7 J3QR07 J3QR07 YTHDC1 YTH domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.3308 2 615.32987 1228.64519 78985.37 0.73724 0.00045365 0.25666 0.00015793 0.9939 0.00061157 615.329909967102 619.337218661931 80.478 0.385 80.478 80.257 80.642 -7.6294E-06 111 33 5 0 0 0 0.00033438 1 47882 86.624 86.624 1 1.3638 1.421 0 11659000 5023800 6634800 14692 1337 5601 5733 22901 22901 GVWSTLPVNEK 11 1 0 Unmodified _GVWSTLPVNEK_ 0 0 0 J3QR07;Q96MU7 J3QR07 J3QR07 YTHDC1 YTH domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.3303 2 615.32987 1228.64519 77175.4 0.53859 0.00033141 0.4948 0.00030447 1.0334 0.00063588 615.329742257085 619.337706654807 79.336 0.38453 79.336 79.188 79.573 0 108 32 5 0 0 0 0.00093586 1 48164 71.349 71.349 1 0.73634 0.74897 0 12533000 6526300 6006400 14693 1337 5601 5733 22902 22902 GVWSTLPVNEK 11 1 0 Unmodified _GVWSTLPVNEK_ 0 0 0 J3QR07;Q96MU7 J3QR07 J3QR07 YTHDC1 YTH domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.3301 2 615.32987 1228.64519 77768.8 0.46416 0.00028561 0.47159 0.00029018 0.93575 0.00057579 615.329568310909 619.839399625612 91.955 0.55845 91.955 91.729 92.287 0 126 34 6 0 0 0 0.056054 1 51071 33.866 33.866 1 1.3612 1.1111 0 2642000 1235800 1406200 14694 1337 5601 5733 22903 22903 GVYSEETLR 9 0 1 Unmodified _GVYSEETLR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.264 2 527.264196 1052.51384 82450.34 0.7715 0.00040678 0.039806 2.0988E-05 0.81131 0.00042777 527.264067667076 532.268214411316 38.041 0.5545 38.041 37.739 38.293 0 197 46 5 0 0 0 0.0019781 2 19453 78.377 63.273 1 0.94276 1.0437 0 61858000 31343000 30515000 14695 1774;1029;1128 5602 5734 22904;22905 22905 GVYSEETLR 9 0 1 Unmodified _GVYSEETLR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.2681 2 527.264196 1052.51384 82115.23 0.62575 0.00032994 0.2477 0.0001306 0.87345 0.00046054 527.264440628484 532.268265100663 37.073 0.68503 37.073 36.696 37.381 0 176 53 5 0 0 0 0.00065244 2 19119 96.253 77.928 1 0.97839 1.1354 0 58656000 30128000 28528000 14696 1774;1029;1128 5602 5734 22906;22907 22906 GWAPVFLDR 9 0 1 Unmodified _GWAPVFLDR_ 0 0 0 Q2YS46;B2RDN3;Q9Y5Y2;H3BNF0;H3BNS4;H3BQR2;H3BRE1 Q2YS46 Q2YS46 NUBP1;NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7821 2 530.782359 1059.55016 82612.2 0.43521 0.000231 0.074888 3.9749E-05 0.5101 0.00027075 530.782354060499 535.786427296801 100.93 1.5396 100.93 100.33 101.86 7.6294E-06 691 122 8 0 0 0 0.034216 1 63856 44.349 12.415 1 0.95645 1.0951 0 166460000 87992000 78465000 14697 888 5603 5735 22908 22908 GWEEALENVIK 11 1 0 Unmodified _GWEEALENVIK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.3402 2 644.33261 1286.65067 75265.04 1.0015 0.00064527 -0.04693 -3.0238E-05 0.95453 0.00061503 644.332439727793 648.33953164509 127.98 0.88366 127.98 127.44 128.33 0 126 34 7 0 0 0 0.00022163 1 77139 91.867 80.377 1 1.1506 0.91094 0 6263200 2867100 3396100 14698 897 5604 5736 22909 22909 GWEEALENVIK 11 1 0 Unmodified _GWEEALENVIK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.3329 2 644.33261 1286.65067 76042.55 0.78472 0.00050562 0.026721 1.7217E-05 0.81144 0.00052284 644.332587775631 648.339558752697 127.72 0.5472 127.72 127.5 128.04 0 102 22 7 0 0 0 0.0017859 2 76116 64.841 64.841 1 1.3647 1.1199 0 5160200 2168800 2991400 14699 897 5604 5736 22910;22911 22910 GWFDAEGQALDGVSISDLK 19 1 0 Unmodified _GWFDAEGQALDGVSISDLK_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1004.9905 2 1004.48654 2006.95854 60619.61 0.91731 0.00092142 0.078448 7.88E-05 0.99575 0.0010002 1004.98798897329 1008.4931923156 121.28 0.35957 121.28 121.1 121.46 0 95 23 6 0 0 0 5.3699E-08 2 80237 89.507 81.641 1 0.509 0.51867 0 12247000 7469800 4776800 14700 1525 5605 5737 22912;22913 22913 GWFDAEGQALDGVSISDLK 19 1 0 Unmodified _GWFDAEGQALDGVSISDLK_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1004.9882 2 1004.48654 2006.95854 60979.38 0.78061 0.00078411 0.29477 0.00029609 1.0754 0.0010802 1004.98880530735 1008.99650821221 133.71 0.40349 133.71 133.56 133.96 0 84 17 7 0 0 0 0.00048689 1 80584 40.278 34.999 1 0.34517 0.2833 0 5259400 3761500 1497900 14701 1525 5605 5737 22914 22914 GWLFASCAK 9 1 0 Unmodified _GWLFASCAK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.2548 2 520.25512 1038.49569 NaN NaN NaN -0.54372 -0.00028287 NaN NaN NaN NaN 81.771 0.33621 81.771 81.573 81.91 0 0 0 0 0.014137 1 48744 63.48 56.129 1 NaN NaN 0 7226800 7226800 0 14702 1698;436 5606 5738 22915 22915 GWLFASCAK 9 1 0 Unmodified _GWLFASCAK_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.2559 2 520.25512 1038.49569 85669.73 0.055116 2.8674E-05 0.57044 0.00029677 0.62555 0.00032545 520.255368987782 524.262335983202 92.798 0.44597 92.798 92.647 93.093 0 97 28 5 0 0 0 0.050765 1 50878 37.727 32.248 1 1.2749 1.0078 0 3198500 1297800 1900700 14703 1698;436 5606 5738 22916 22916 GWLYYEAGQR 10 0 1 Unmodified _GWLYYEAGQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8022 2 621.798737 1241.58292 77670.76 0.78597 0.00048871 -0.55119 -0.00034273 0.23478 0.00014598 622.300141380754 626.802492497741 75.295 0.73857 75.295 74.97 75.709 0 235 61 5 0 0 0 0.0005862 2 44102 84.476 70.318 1 1.1725 1.1801 0 17428000 7496000 9932100 14704 1754 5607 5739 22917;22918 22917 GWLYYEAGQR 10 0 1 Unmodified _GWLYYEAGQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8029 2 621.798737 1241.58292 77743.58 0.53423 0.00033218 0.035841 2.2286E-05 0.57007 0.00035447 622.301028566562 626.802644515555 73.992 0.68748 73.992 73.698 74.386 0 204 56 5 0 0 0 0.0022766 2 44350 69.825 59.914 1 1.3079 1.3119 0 17652000 7372300 10280000 14705 1754 5607 5739 22919;22920 22919 GWLYYEAGQR 10 0 1 Unmodified _GWLYYEAGQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8031 2 621.798737 1241.58292 79711.13 0.50683 0.00031515 -0.27223 -0.00016927 0.2346 0.00014587 622.300058800043 626.802477732886 85.666 0.48495 85.666 85.459 85.944 0 101 29 5 0 0 0 0.012027 1 46949 51.193 51.193 1 2.0756 1.8012 0 2151300 879700 1271600 14706 1754 5607 5739 22921 22921 GWNWGTVK 8 1 0 Unmodified _GWNWGTVK_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4;Q59GH7;E9PPZ7 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.2405 2 474.240327 946.466101 87714.84 0.21934 0.00010402 0.52155 0.00024734 0.74089 0.00035136 474.240424211846 478.247710426695 68.32 1.0002 68.32 67.776 68.776 0 333 84 6 0 0 0 0.0050709 1 40401 91.626 91.626 1 0.57448 0.62938 0 40867000 24776000 16091000 14707 167 5608 5740 22922 22922 GWNWGTVK 8 1 0 Unmodified _GWNWGTVK_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4;Q59GH7;E9PPZ7 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 474.2405 2 474.240327 946.466101 88656.55 0.11979 5.6811E-05 0.95142 0.0004512 1.0712 0.00050801 474.240446425701 478.248277408273 79.676 0.88299 79.676 79.299 80.182 -7.6294E-06 230 53 6 0 0 0 0.010824 1 42928 71.342 71.342 1 0.84054 0.66415 0 6081800 3249500 2832300 14708 167 5608 5740 22923 22923 GWNWGTVK 8 1 0 Unmodified _GWNWGTVK_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4;Q59GH7;E9PPZ7 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 474.2405 2 474.240327 946.466101 89944.16 0.18884 8.9554E-05 0.73831 0.00035014 0.92714 0.00043969 474.240351035158 478.248019865643 79.898 1.014 79.898 79.48 80.494 0 222 60 6 0 0 0 0.0092348 1 42224 75.189 75.189 1 0.86486 0.703 0 4490500 2320500 2170000 14709 167 5608 5740 22924 22924 GWPDSTNTWEPLQNLK 16 1 0 Unmodified _GWPDSTNTWEPLQNLK_ 0 0 0 Q9H5I1;C9IYH9;C9JMB4;Q5JSS2 Q9H5I1 Q9H5I1 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 947.9664 2 943.45759 1884.90063 63511.38 0.78048 0.00073635 -0.35853 -0.00033826 0.42194 0.00039808 943.958487069817 947.46485320109 121.86 0.36193 121.86 121.66 122.02 -7.6294E-06 54 18 5 0 0 0 0.028468 1 72544 32.859 32.859 1 2.2144 1.7207 0 3614900 1476000 2139000 14710 2036 5609 5741 22925 22925 GWSMSEQSEESVGGR 15 0 1 Oxidation (M) _GWSM(ox)SEQSEESVGGR_ GWSM(1)SEQSEESVGGR GWSM(58.27)SEQSEESVGGR 0 1 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.3507 2 821.344108 1640.67366 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.033 1 32.033 31.533 32.533 0 0 0 0 0.00056693 1 15843 58.274 51.741 1 14711 1010 5610 5742 22926 22926 799 GWSMSEQSEESVGGR 15 0 1 Oxidation (M) _GWSM(ox)SEQSEESVGGR_ GWSM(1)SEQSEESVGGR GWSM(98.35)SEQSEESVGGR 0 1 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.3491 2 821.344108 1640.67366 68142.1 1.2145 0.00099751 -0.19992 -0.0001642 1.0146 0.00083331 821.344088286355 826.348153387746 31.657 0.45676 31.657 31.397 31.854 -1.9073E-06 134 40 5 0 0 0 1.396E-06 1 15583 98.353 97.102 1 2.2705 2.2282 0 13808000 3995200 9813200 14712 1010 5610 5742 22927 22927 799 GYAFIEFASFEDAK 14 1 0 Unmodified _GYAFIEFASFEDAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.377 2 797.874839 1593.73512 68747.94 1.0776 0.00085981 -0.10518 -8.3923E-05 0.97244 0.00077589 798.376306967901 801.881853496902 118.21 0.72551 118.21 117.83 118.55 -7.6294E-06 287 43 8 0 0 0 0.00018442 2 75766 71.555 67.089 1 1.0609 1.1509 0 45276000 22072000 23204000 14713 151 5611 5743 22928;22929 22928 GYAFIEFASFEDAK 14 1 0 Unmodified _GYAFIEFASFEDAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.3766 2 797.874839 1593.73512 68922.3 1.1271 0.00089925 -0.1175 -9.3749E-05 1.0096 0.0008055 797.874592382369 801.88170512286 117.69 0.97357 117.69 117.21 118.18 7.6294E-06 326 62 9 0 0 0 0.00012949 1 77160 80.245 71.663 1 1.0242 1.1422 0 52122000 24300000 27822000 14714 151 5611 5743 22930 22930 GYAFIEFASFEDAK 14 1 0 Unmodified _GYAFIEFASFEDAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 798.378 2 797.874839 1593.73512 67662.86 0.69891 0.00055764 -0.16793 -0.00013399 0.53098 0.00042366 798.376281435471 802.383416360538 130.14 0.74751 130.14 129.83 130.58 0 279 37 12 0 0 0 0.00013888 3 78715 78.653 78.653 1 0.86577 0.69907 0 22720000 11995000 10726000 14715 151 5611 5743 22931;22932;22933 22931 GYAFIEFASFEDAK 14 1 0 Unmodified _GYAFIEFASFEDAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 798.3776 2 797.874839 1593.73512 68012.71 1.0123 0.00080768 -0.048114 -3.8389E-05 0.96418 0.00076929 798.376352021859 802.383472742244 130 1.006 130 129.6 130.6 0 238 38 12 0 0 0 6.2213E-07 2 77712 110.86 110.86 1 0.87326 0.70339 0 22923000 11718000 11205000 14716 151 5611 5743 22934;22935 22934 GYAFNHSADFETVR 14 0 1 Unmodified _GYAFNHSADFETVR_ 0 0 0 B4DHK9;P61160;B4DWQ5;Q8IY98;F5H6T1 B4DHK9 B4DHK9 ACTR2 Actin-related protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.9213 3 538.58295 1612.72702 NaN NaN NaN 0.26378 0.00014207 NaN NaN NaN NaN 61.382 0.6889 61.382 61.105 61.794 0 0 0 0 0.029036 1 35156 31.776 26.778 1 NaN NaN 0 5738600 0 5738600 14717 976 5612 5744 22936 22936 GYAFNHSADFETVR 14 0 1 Unmodified _GYAFNHSADFETVR_ 0 0 0 B4DHK9;P61160;B4DWQ5;Q8IY98;F5H6T1 B4DHK9 B4DHK9 ACTR2 Actin-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.92 3 538.58295 1612.72702 84816 0.70649 0.00038051 0.1702 9.1664E-05 0.87669 0.00047217 538.582973826393 542.253640987794 59.596 0.58024 59.596 59.342 59.922 -3.8147E-06 146 50 5 0 0 0 4.624E-05 1 34656 76.728 76.728 1 2.2086 2.1773 0 13034000 3904100 9129900 14718 976 5612 5744 22937 22937 GYAFNHSADFETVR 14 0 1 Unmodified _GYAFNHSADFETVR_ 0 0 0 B4DHK9;P61160;B4DWQ5;Q8IY98;F5H6T1 B4DHK9 B4DHK9 ACTR2 Actin-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.9189 3 538.58295 1612.72702 84537.46 0.2752 0.00014822 0.13367 7.1995E-05 0.40888 0.00022021 538.583137188654 541.918924529376 70.772 0.5105 70.772 70.493 71.004 0 92 33 5 0 0 0 0.052317 1 37202 17.069 17.069 1 2.3001 1.9961 0 1934400 680800 1253600 14719 976 5612 5744 22938 22938 GYAFVEFESEDVAK 14 1 0 Unmodified _GYAFVEFESEDVAK_ 0 0 0 Q9BYG3;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.3793 2 795.869753 1589.72495 68933.11 0.79771 0.00063487 -0.15424 -0.00012275 0.64347 0.00051212 795.869596438371 799.876618471544 96.988 0.85831 96.988 96.588 97.447 7.6294E-06 417 74 8 0 0 0 5.1442E-05 2 58976 92.866 92.866 1 1.052 1.1901 0 86625000 38086000 48538000 14720 2019 5613 5745 22939;22940 22939 GYAFVEFESEDVAK 14 1 0 Unmodified _GYAFVEFESEDVAK_ 0 0 0 Q9BYG3;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.8701 2 795.869753 1589.72495 68403 0.80269 0.00063884 0.083863 6.6744E-05 0.88656 0.00070558 795.86963088632 799.876787288064 96.254 0.77389 96.254 95.901 96.675 0 446 67 8 0 0 0 7.7852E-06 2 59854 99.522 93.982 1 1.076 1.2023 0 93995000 43066000 50930000 14721 2019 5613 5745 22941;22942 22942 GYAFVEFESEDVAK 14 1 0 Unmodified _GYAFVEFESEDVAK_ 0 0 0 Q9BYG3;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.8705 2 795.869753 1589.72495 67884.62 0.74674 0.0005943 0.032474 2.5845E-05 0.77921 0.00062015 795.869754764329 799.876804833924 109.95 0.79825 109.95 109.64 110.44 7.6294E-06 284 41 10 0 0 0 2.4053E-09 2 63355 116.55 109.17 1 1.2443 1.0248 0 40499000 18341000 22158000 14722 2019 5613 5745 22943;22944 22944 GYAFVEFESEDVAK 14 1 0 Unmodified _GYAFVEFESEDVAK_ 0 0 0 Q9BYG3;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 795.8703 2 795.869753 1589.72495 68158.66 0.81228 0.00064647 -0.033644 -2.6776E-05 0.77864 0.00061969 795.869679706798 799.876744091461 109.83 0.81461 109.83 109.53 110.34 0 284 41 10 0 0 0 5.1441E-05 2 62368 92.866 90.068 1 1.382 1.1592 0 47836000 19926000 27910000 14723 2019 5613 5745 22945;22946 22946 GYAFVHFETQEAADK 15 1 0 Unmodified _GYAFVHFETQEAADK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;H0YCC8;H0YEQ8 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.4094 2 856.899377 1711.7842 66398.16 0.48708 0.00041738 0.09352 8.0137E-05 0.5806 0.00049752 856.898764552401 861.408528393462 69.429 0.4814 69.429 69.261 69.742 0 128 40 5 0 0 0 0.00010473 2 41346 83.045 83.045 1 1.8999 1.9043 0 13855000 4629100 9225600 14724 818 5614 5746 22947;22948 22948 GYAFVQYSNER 11 0 1 Unmodified _GYAFVQYSNER_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM1;Q5QPM2;B4DSJ1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.3132 2 667.312209 1332.60986 75056.08 0.34877 0.00023274 0.6419 0.00042835 0.99067 0.00066109 667.312466892844 672.316738127854 71.518 0.6517 71.518 71.103 71.754 0 229 46 6 0 0 0 0.00011853 1 37678 96.331 96.331 1 0.57616 0.48719 0 9484800 5598200 3886700 14725 741 5615 5747 22949 22949 GYAFVTFCTK 10 1 0 Unmodified _GYAFVTFCTK_ 0 0 0 Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.2965 2 597.286617 1192.55868 81347.16 0.58073 0.00034686 0.9679 0.00057812 1.5486 0.00092498 597.287397681589 601.293983321735 86.663 0.23939 86.663 86.502 86.741 -7.6294E-06 41 21 4 0 0 0 0.0035438 1 53406 64.04 55.508 1 2.29 2.3418 0 9349700 2695300 6654400 14726 864 5616 5748 22950 22950 GYATDESTVSSVQGSR 16 0 1 Unmodified _GYATDESTVSSVQGSR_ 0 0 0 A0A0F7KYT8;A0A0F7L0Q8;B4DM78;Q14341 A0A0F7KYT8 A0A0F7KYT8 FXR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.3805 2 822.379005 1642.74346 68805.52 0.74825 0.00061534 0.006758 5.5576E-06 0.755 0.0006209 822.379053195103 827.38292960521 36.54 0.28024 36.54 36.365 36.645 0 70 25 5 0 0 0 2.2376E-06 1 18441 93.011 86.627 1 0.63567 0.66459 0 10713000 5554400 5158600 14727 531 5617 5749 22951 22951 GYATDESTVSSVQGSR 16 0 1 Unmodified _GYATDESTVSSVQGSR_ 0 0 0 A0A0F7KYT8;A0A0F7L0Q8;B4DM78;Q14341 A0A0F7KYT8 A0A0F7KYT8 FXR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.3818 2 822.379005 1642.74346 67859.51 1.3203 0.0010858 0.10375 8.5322E-05 1.4241 0.0011711 822.379169187904 827.383033272247 35.723 0.27393 35.723 35.54 35.814 0 66 22 5 0 0 0 4.5646E-10 1 18179 112.43 105.05 1 0.7242 0.7298 0 10614000 6527000 4087500 14728 531 5617 5749 22952 22952 GYATDESTVSSVQGSR 16 0 1 Unmodified _GYATDESTVSSVQGSR_ 0 0 0 A0A0F7KYT8;A0A0F7L0Q8;B4DM78;Q14341 A0A0F7KYT8 A0A0F7KYT8 FXR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.3837 2 822.379005 1642.74346 68542.02 0.69288 0.00056981 -0.24044 -0.00019773 0.45245 0.00037208 822.378582594267 827.383049594425 42.709 0.44139 42.709 42.454 42.896 0 113 29 6 0 0 0 0.020784 1 19916 28.327 28.327 1 0.61899 0.54163 0 1855900 1223200 632720 14729 531 5617 5749 22953 22953 GYAVLGGER 9 0 1 Unmodified _GYAVLGGER_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.2432 2 461.243067 920.47158 NaN NaN NaN 0.05319 2.4534E-05 NaN NaN NaN NaN 42.372 0.33985 42.372 42.163 42.503 0 0 0 0 0.005969 1 22481 73.26 56.333 1 NaN NaN 0 13731000 13731000 0 14730 587 5618 5750 22954 22954 GYAVLGGER 9 0 1 Unmodified _GYAVLGGER_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 466.2468 2 461.243067 920.47158 88856.61 0.062639 2.8892E-05 0.2065 9.5248E-05 0.26914 0.00012414 461.243117382355 466.247159639689 47.945 0.47736 47.945 47.762 48.239 0 101 32 5 0 0 0 0.035569 1 23273 43.808 35.467 1 0.70103 0.60785 0 2074400 1373100 701320 14731 587 5618 5750 22955 22955 GYAYTFITEDQAR 13 0 1 Unmodified _GYAYTFITEDQAR_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.8675 2 767.862263 1533.70997 70086.62 0.90777 0.00069704 -0.56245 -0.00043188 0.34532 0.00026516 767.861957723142 772.866654337409 82.741 0.75312 82.741 82.423 83.176 0 206 62 5 0 0 0 0.00013248 2 49585 73.781 73.781 1 1.0508 1.0949 0 21640000 9651500 11988000 14732 511 5619 5751 22956;22957 22956 GYAYTFITEDQAR 13 0 1 Unmodified _GYAYTFITEDQAR_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.867 2 767.862263 1533.70997 70318.45 0.88922 0.0006828 -0.63621 -0.00048852 0.25301 0.00019428 767.861631942348 772.866735243016 81.783 0.70903 81.783 81.37 82.079 0 190 60 5 0 0 0 0.00015608 1 49901 85.958 76.77 1 0.84076 0.91803 0 30031000 15621000 14409000 14733 511 5619 5751 22958 22958 GYAYTFITEDQAR 13 0 1 Unmodified _GYAYTFITEDQAR_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 768.3644 2 767.862263 1533.70997 71665.56 0.72699 0.00055823 -0.74131 -0.00056922 -0.01432 -1.0996E-05 767.861418368238 772.865336171036 94.668 0.5033 94.668 94.372 94.875 0 115 32 6 0 0 0 0.010429 2 52977 41.689 38.044 1 0.5599 0.47109 0 4495500 3093900 1401700 14734 511 5619 5751 22959;22960 22959 GYAYVEFENPDEAEK 15 1 0 Unmodified _GYAYVEFENPDEAEK_ 0 0 0 H3BV80;H3BMS0;H3BMM9;H3BTC0;D3DU92;Q15287;H3BPG5 H3BV80 H3BV80 RNPS1 RNA-binding protein with serine-rich domain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 884.8938 2 880.886132 1759.75771 NaN NaN NaN 0.11621 0.00010237 NaN NaN NaN NaN 78.812 0.62299 78.812 78.505 79.128 0 0 0 0 0.0011293 1 47636 66.595 60.75 1 NaN NaN 0 34268000 0 34268000 14735 1192 5620 5752 22961 22961 GYAYVEFENPDEAEK 15 1 0 Unmodified _GYAYVEFENPDEAEK_ 0 0 0 H3BV80;H3BMS0;H3BMM9;H3BTC0;D3DU92;Q15287;H3BPG5 H3BV80 H3BV80 RNPS1 RNA-binding protein with serine-rich domain 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 880.887 2 880.886132 1759.75771 64520.71 0.66593 0.00058661 0.12445 0.00010963 0.79038 0.00069623 881.387500063062 884.893227161433 91.477 0.67605 91.477 91.217 91.893 0 252 49 8 0 0 0 1.4771E-05 2 50750 89.403 83.797 1 0.70678 0.56357 0 9570800 5312000 4258900 14736 1192 5620 5752 22962;22963 22962 GYAYVEFENPDEAEK 15 1 0 Unmodified _GYAYVEFENPDEAEK_ 0 0 0 H3BV80;H3BMS0;H3BMM9;H3BTC0;D3DU92;Q15287;H3BPG5 H3BV80 H3BV80 RNPS1 RNA-binding protein with serine-rich domain 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 884.894 2 880.886132 1759.75771 64841.38 0.19349 0.00017044 0.21194 0.00018669 0.40543 0.00035714 881.387775890397 884.893542628293 91.435 0.56932 91.435 91.187 91.757 0 226 40 8 0 0 0 8.793E-05 1 49929 83.182 79.959 1 0.71188 0.58454 0 9334400 5495500 3838800 14737 1192 5620 5752 22964 22964 GYDAPLCNLLLFK 13 1 0 Unmodified _GYDAPLCNLLLFK_ 0 0 0 Q8TAF6;O60488;B4DH39;H0Y9A0 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.4076 2 762.39997 1522.78539 71320.27 0.88862 0.00067748 -0.14498 -0.00011053 0.74364 0.00056695 762.90145211033 766.407003003851 125.99 0.46702 125.99 125.75 126.21 -7.6294E-06 118 34 5 0 0 0 0.00013217 1 81923 79.974 73.68 1 1.5039 1.5184 0 5538000 2436800 3101200 14738 1394 5621 5753 22965 22965 GYDAPLCNLLLFK 13 1 0 Unmodified _GYDAPLCNLLLFK_ 0 0 0 Q8TAF6;O60488;B4DH39;H0Y9A0 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.4012 2 762.39997 1522.78539 72443.52 0.90369 0.00068898 -0.0047538 -3.6243E-06 0.89894 0.00068535 762.399753755297 766.407187522033 125.51 0.47117 125.51 125.3 125.77 0 133 31 6 0 0 0 0.00011838 2 83641 94.692 85.004 1 1.4385 1.4371 0 6599000 2800900 3798100 14739 1394 5621 5753 22966;22967 22967 GYDFESETDTETIAK 15 1 0 Unmodified _GYDFESETDTETIAK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.8843 2 853.375597 1704.73664 NaN NaN NaN 0.28572 0.00024382 NaN NaN NaN NaN 71.275 0.60503 71.275 71.004 71.609 0 0 0 0 1.0381E-06 2 41443 93.258 87.616 1 NaN NaN 0 17344000 0 17344000 14740 1688 5622 5754 22968;22969 22969 GYDFESETDTETIAK 15 1 0 Unmodified _GYDFESETDTETIAK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.3881 2 853.375597 1704.73664 67285.2 0.61173 0.00052204 0.6917 0.00059028 1.3034 0.0011123 853.376028412446 857.383581267594 70.319 0.56154 70.319 70.003 70.564 0 187 46 6 0 0 0 1.6187E-05 1 41815 88.338 82.797 1 3.0385 3.2341 0 20719000 3977700 16741000 14741 1688 5622 5754 22970 22970 GYDFESETDTETIAK 15 1 0 Unmodified _GYDFESETDTETIAK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 857.3834 2 853.375597 1704.73664 66774.41 0.63083 0.00053833 0.51168 0.00043666 1.1425 0.00097499 853.877483476458 857.382869227431 81.755 0.52599 81.755 81.54 82.066 0 136 31 6 0 0 0 0.00022 3 44334 63.727 63.727 1 1.3599 1.0724 0 4068800 1733300 2335500 14742 1688 5622 5754 22971;22972;22973 22971 GYDFESETDTETIAK 15 1 0 Unmodified _GYDFESETDTETIAK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 857.3859 2 853.375597 1704.73664 67190.16 0.53449 0.00045612 0.82979 0.00070812 1.3643 0.0011642 853.37605042202 857.383610969173 82.135 0.43552 82.135 81.905 82.34 0 135 26 6 0 0 0 0.00068309 3 43708 52.247 52.247 1 1.4084 1.0985 0 3630500 1693000 1937500 14743 1688 5622 5754 22974;22975;22976 22974 GYDSAGVGFDGGNDK 15 1 0 Unmodified _GYDSAGVGFDGGNDK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.8182 2 729.810227 1457.6059 73648.84 0.93632 0.00068333 0.00028544 2.0832E-07 0.9366 0.00068354 730.311890506012 733.817123234636 45.259 0.62362 45.259 44.977 45.6 3.8147E-06 140 54 6 0 0 0 0.0005684 1 24225 54.7 48.031 1 3.017 3.0504 0 18318000 5045200 13273000 14744 1688 5623 5755 22977 22977 GYDSAGVGFDGGNDK 15 1 0 Unmodified _GYDSAGVGFDGGNDK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.3194 2 729.810227 1457.6059 NaN NaN NaN 0.16946 0.00012368 NaN NaN NaN NaN 44.442 0.51362 44.442 44.151 44.665 0 0 0 0 0.0002548 1 24147 76.522 60.933 1 NaN NaN 0 18746000 0 18746000 14745 1688 5623 5755 22978 22978 GYDSAGVGFDGGNDK 15 1 0 Unmodified _GYDSAGVGFDGGNDK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.8155 2 729.810227 1457.6059 71766.8 0.43698 0.00031891 -0.38279 -0.00027936 0.054187 3.9546E-05 730.311577795536 733.816896293042 52.365 0.42955 52.365 52.149 52.579 0 112 33 4 0 0 0 0.025621 2 25823 29.071 28.283 1 1.395 1.1474 0 2391000 1112900 1278100 14746 1688 5623 5755 22979;22980 22979 GYDSAGVGFDGGNDK 15 1 0 Unmodified _GYDSAGVGFDGGNDK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 733.8174 2 729.810227 1457.6059 73422.38 0.45555 0.00033247 -0.016527 -1.2062E-05 0.43903 0.00032041 729.810301879843 733.81724275663 52.954 0.51358 52.954 52.644 53.157 0 156 38 6 0 0 0 0.0032429 2 25626 42.629 42.629 1 1.4253 1.1521 0 1923900 724440 1199500 14747 1688 5623 5755 22981;22982 22981 GYDSDPVK 8 1 0 Unmodified _GYDSDPVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.7132 2 440.705983 879.397412 91027.65 0.035165 1.5498E-05 0.11813 5.2059E-05 0.15329 6.7556E-05 440.705963356766 444.713022679879 22.144 0.42621 22.144 21.955 22.382 0 111 24 8 0 0 0 0.012693 1 8268 67.032 54.825 1 0.73848 0.83361 0 79794000 42864000 36929000 14748 1471 5624 5756 22983 22983 GYDVIAQAQSGTGK 14 1 0 Unmodified _GYDVIAQAQSGTGK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102;J3KS93;J3KSN7;J3KT04;E7EMV8;Q86WD0 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.8569 2 697.849155 1393.68376 72029.2 0.50874 0.00035503 -0.010499 -7.3269E-06 0.49824 0.0003477 697.849144187838 701.85622681725 50.814 1.0969 50.814 50.488 51.585 0 498 102 7 0 0 0 6.4431E-10 3 27945 152.7 152.7 1 1.8362 2.1192 0 219700000 78757000 140940000 14749 770 5625 5757 22984;22985;22986 22984 GYDVIAQAQSGTGK 14 1 0 Unmodified _GYDVIAQAQSGTGK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102;J3KS93;J3KSN7;J3KT04;E7EMV8;Q86WD0 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.8555 2 697.849155 1393.68376 72037.63 0.96071 0.00067043 -0.2961 -0.00020663 0.66461 0.0004638 697.849058632999 701.855917746956 49.925 1.0054 49.925 49.438 50.444 0 429 86 8 0 0 0 4.2563E-06 2 27917 122.7 115.64 1 1.9307 2.2568 0 286590000 97558000 189030000 14750 770 5625 5757 22987;22988 22987 GYDVIAQAQSGTGK 14 1 0 Unmodified _GYDVIAQAQSGTGK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102;J3KS93;J3KSN7;J3KT04;E7EMV8;Q86WD0 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.3574 2 697.849155 1393.68376 71836.64 0.4474 0.00031222 -0.095313 -6.6514E-05 0.35209 0.00024571 697.849210160516 701.856125939547 58.865 0.97408 58.865 58.503 59.477 0 437 74 10 0 0 0 4.2553E-06 2 29835 128.88 128.88 1 1.5214 1.2374 0 29777000 12323000 17454000 14751 770 5625 5757 22989;22990 22989 GYDVIAQAQSGTGK 14 1 0 Unmodified _GYDVIAQAQSGTGK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102;J3KS93;J3KSN7;J3KT04;E7EMV8;Q86WD0 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 697.8495 2 697.849155 1393.68376 72166.13 0.44931 0.00031355 0.069565 4.8546E-05 0.51887 0.0003621 697.849338170509 701.856136613482 59.434 0.96658 59.434 59.115 60.081 0 425 73 9 0 0 0 0.0010374 2 29541 73.632 73.632 1 1.5502 1.2809 0 31815000 12867000 18947000 14752 770 5625 5757 22991;22992 22991 GYDYGPHFQGILEASLEGDSGR 22 0 1 Unmodified _GYDYGPHFQGILEASLEGDSGR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.0336 3 790.032861 2367.07675 68336.26 0.88541 0.0006995 0.26334 0.00020805 1.1487 0.00090755 790.032956750614 793.369683728449 119.13 0.38258 119.13 118.95 119.33 7.6294E-06 83 16 8 0 0 0 0.001247 2 70440 17.262 14.209 1 0.80548 0.67284 0 3294100 1799300 1494700 14753 587 5626 5758 22993;22994 22993 GYDYGPHFQGILEASLEGDSGR 22 0 1 Unmodified _GYDYGPHFQGILEASLEGDSGR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 790.3658 3 790.032861 2367.07675 68537.95 0.93634 0.00073974 0.34256 0.00027063 1.2789 0.0010104 790.367530304532 793.703854494858 118.93 0.48586 118.93 118.71 119.2 0 74 19 7 0 0 0 0.01432 2 69413 16.792 16.207 1 0.92987 0.77812 0 4911300 2373900 2537300 14754 587 5626 5758 22995;22996 22995 GYEENYFFIFR 11 0 1 Unmodified _GYEENYFFIFR_ 0 0 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.8488 2 742.845884 1483.67722 71887.23 1.2367 0.00091871 -0.086227 -6.4054E-05 1.1505 0.00085465 742.84594263995 747.84957207491 132.44 0.38698 132.44 132.25 132.64 0 78 17 7 0 0 0 0.0015533 1 80488 66.621 66.621 1 1.9613 1.7035 0 2226300 855390 1370900 14755 46 5627 5759 22997 22997 GYEENYFFIFR 11 0 1 Unmodified _GYEENYFFIFR_ 0 0 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 747.8516 2 742.845884 1483.67722 71264.07 1.1811 0.00087737 0.18243 0.00013552 1.3635 0.0010129 743.347507952153 747.849916019189 132.2 0.46173 132.2 131.95 132.41 0 89 20 7 0 0 0 0.0054128 1 79358 56.258 54.755 1 1.8004 1.5943 0 2412300 1015000 1397300 14756 46 5627 5759 22998 22998 GYEEVHVPALK 11 1 0 Unmodified _GYEEVHVPALK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.3365 2 621.32987 1240.64519 NaN NaN NaN 0.15388 9.561E-05 NaN NaN NaN NaN 63.138 1.1548 63.138 62.72 63.874 0 0 0 0 0.0012573 2 36085 84.615 73.463 1 NaN NaN 0 9383400 0 9383400 14757 1411 5628 5760 22999;23000 23000 GYEEVHVPALK 11 1 0 Unmodified _GYEEVHVPALK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.325 2 621.32987 1240.64519 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.894 1 62.894 62.394 63.394 3.8147E-06 0 0 0 0.00079231 1 36114 70.908 47.589 1 14758 1411 5628 5760 23001 23001 GYEEVHVPALK 11 1 0 Unmodified _GYEEVHVPALK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.329 2 621.32987 1240.64519 NaN NaN NaN -2.7796 -0.001727 NaN NaN NaN NaN 61.698 1.0036 61.698 61.042 62.045 -3.8147E-06 0 0 0 1.3404E-06 1 36073 105.52 80.745 1 NaN NaN 0 16090000 16090000 0 14759 1411 5628 5760 23002 23002 GYEEVHVPALK 11 1 0 Unmodified _GYEEVHVPALK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.3294 2 621.32987 1240.64519 78780.61 0.4404 0.00027363 -1.602 -0.00099534 -1.1616 -0.00072171 621.32848363722 625.336930839247 73.123 0.69397 73.123 72.782 73.476 0 150 52 5 0 0 0 0.031222 1 37787 38.276 33.825 1 0.85808 0.75344 0 1070000 478150 591800 14760 1411 5628 5760 23003 23003 GYELLFQPEVVR 12 0 1 Unmodified _GYELLFQPEVVR_ 0 0 0 Q7KZJ3;A0A024R4Z0;Q96FS1;Q68DU0;C9JZR2;O60716;A0A024R4Y7 Q7KZJ3 Q7KZJ3 CTNND1;DKFZp781O2021 Catenin delta-1 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.3919 2 725.390459 1448.76637 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.34 1 122.34 121.84 122.84 0 0 0 0 0.017695 1 72051 52.725 41.896 1 14761 165 5629 5761 23004 23004 GYEVHGIVR 9 0 1 Unmodified _GYEVHGIVR_ 0 0 0 B2R9X3;O60547 B2R9X3 B2R9X3 GMDS GDP-mannose 4,6 dehydratase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.2816 2 515.277441 1028.54033 NaN NaN NaN -1.8936 -0.00097573 NaN NaN NaN NaN 34.509 0.29403 34.509 34.337 34.631 0 0 0 0 0.040383 1 17305 50.127 37.138 1 NaN NaN 0 7053100 0 7053100 14762 869 5630 5762 23005 23005 GYFDEEMNR 9 0 1 Oxidation (M) _GYFDEEM(ox)NR_ GYFDEEM(1)NR GYFDEEM(61.96)NR 0 1 0 A0A075B730;A0A087X1U6;P58107;Q15149;D3DWL0 A0A075B730;P58107;Q15149 Q15149 EPPK1;PLEC;PLEC1 Epiplakin;Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.7391 2 588.734945 1175.45534 78485.96 1.392 0.00081953 -0.045478 -2.6775E-05 1.3465 0.00079276 588.734898494151 593.738991154681 35.23 0.80691 35.23 34.912 35.719 0 299 73 6 0 0 0 0.0036175 1 17820 61.962 60.757 1 2.7466 3.0039 0 34679000 8964800 25714000 14763 1754;397;1622 5631 5763 23006 23006 288 GYFEYIEENK 10 1 0 Unmodified _GYFEYIEENK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q5RI18 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.3033 2 646.295693 1290.57683 74957.52 0.63362 0.00040951 -0.087182 -5.6345E-05 0.54644 0.00035316 646.295528807899 650.302689806201 78.515 0.92777 78.515 78.142 79.07 0 474 81 8 0 0 0 1.6847E-08 2 46364 122.52 118.07 1 1.4283 1.6444 0 209620000 88053000 121560000 14764 999 5632 5764 23007;23008 23008 GYFEYIEENK 10 1 0 Unmodified _GYFEYIEENK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q5RI18 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.2955 2 646.295693 1290.57683 74808.27 0.93115 0.0006018 0.049182 3.1786E-05 0.98033 0.00063358 646.29562788997 650.302834814087 77.479 0.94178 77.479 77.106 78.048 7.6294E-06 437 78 9 0 0 0 2.5023E-08 2 46754 120.87 114.72 1 1.4296 1.6635 0 240200000 100710000 139490000 14765 999 5632 5764 23009;23010 23010 GYFEYIEENK 10 1 0 Unmodified _GYFEYIEENK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q5RI18 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.2958 2 646.295693 1290.57683 74935.52 0.56699 0.00036644 0.1641 0.00010606 0.73109 0.0004725 646.295798751959 650.302811470917 89.885 0.94223 89.885 89.601 90.543 0 337 64 10 0 0 0 0.00048323 2 49658 86.136 81.837 1 0.90175 0.73835 0 35466000 17693000 17773000 14766 999 5632 5764 23011;23012 23011 GYFEYIEENK 10 1 0 Unmodified _GYFEYIEENK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q5RI18 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.2965 2 646.295693 1290.57683 75835.7 0.43047 0.00027821 0.11431 7.3878E-05 0.54478 0.00035209 646.295827535888 650.302991344714 89.906 1.1315 89.906 89.635 90.766 -7.6294E-06 353 72 9 0 0 0 0.0010982 2 48868 76.221 71.609 1 0.92756 0.76595 0 31251000 16366000 14885000 14767 999 5632 5764 23013;23014 23013 GYFFNGDCCELPTVR 15 0 1 Unmodified _GYFFNGDCCELPTVR_ 0 0 0 A0A1B0GUH9;A0A1P0AZG4;A0PJI9 A0A1B0GUH9 A0A1B0GUH9 C10orf12 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 922.9014 2 917.897996 1833.78144 NaN NaN NaN -0.37707 -0.00034611 NaN NaN NaN NaN 113.86 0.34381 113.86 113.68 114.02 0 0 0 0 0.0436 1 66368 38.021 37.116 1 NaN NaN 0 1207600 0 1207600 14768 630 5633 5765 23015 23015 GYFFNGDCCELPTVR 15 0 1 Unmodified _GYFFNGDCCELPTVR_ 0 0 0 A0A1B0GUH9;A0A1P0AZG4;A0PJI9 A0A1B0GUH9 A0A1B0GUH9 C10orf12 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 923.4031 2 917.897996 1833.78144 NaN NaN NaN 0.22846 0.0002097 NaN NaN NaN NaN 113.69 0.32526 113.69 113.56 113.88 -7.6294E-06 0 0 0 0.019593 1 65380 42.629 38.456 1 NaN NaN 0 706770 0 706770 14769 630 5633 5765 23016 23016 GYGFGLIK 8 1 0 Unmodified _GYGFGLIK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 431.7494 2 427.742171 853.469789 91255.99 0.27406 0.00011723 0.17057 7.2961E-05 0.44463 0.00019019 427.742138841838 431.749203974073 84.021 1.3113 84.021 83.516 84.827 0 457 106 8 0 0 0 0.0293 2 50151 52.683 27.685 1 1.6659 1.9473 0 280870000 103640000 177230000 14770 639 5634 5766 23017;23018 23017 GYGFGLIK 8 1 0 Unmodified _GYGFGLIK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.7422 2 427.742171 853.469789 91151.91 -0.16541 -7.0752E-05 0.3941 0.00016857 0.22869 9.7821E-05 427.742314630987 431.749258794839 82.766 1.0903 82.766 82.503 83.593 0 432 83 8 0 0 0 0.01767 1 50726 60.294 34.141 1 1.6526 1.9292 0 271430000 98127000 173310000 14771 639 5634 5766 23019 23019 GYGFGLIK 8 1 0 Unmodified _GYGFGLIK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 431.749 2 427.742171 853.469789 91719.43 -0.41511 -0.00017756 0.60406 0.00025838 0.18895 8.0822E-05 427.742363297789 431.749364669056 95.893 0.93707 95.893 95.542 96.48 -7.6294E-06 254 60 6 0 0 0 0.031924 1 52884 50.966 25.967 1 2.3139 1.8584 0 15192000 4097700 11094000 14772 639 5634 5766 23020 23020 GYGFITFSDSECAK 14 1 0 Unmodified _GYGFITFSDSECAK_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;A0A0U1RQW2 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.355 2 791.348131 1580.68171 70492.28 0.97294 0.00076993 -0.52955 -0.00041905 0.44339 0.00035088 791.849475803056 795.856780123952 92.966 0.61057 92.966 92.62 93.231 7.6294E-06 165 52 5 0 0 0 0.00028036 3 56421 61.958 61.958 1 0.9952 1.0137 0 13261000 6125700 7135300 14773 588 5635 5767 23021;23022;23023 23022 GYGFITFSDSECAK 14 1 0 Unmodified _GYGFITFSDSECAK_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;A0A0U1RQW2 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.3497 2 791.348131 1580.68171 69161.66 0.68297 0.00054047 -1.1934 -0.00094436 -0.51038 -0.00040389 791.84962284689 795.355301908553 106.05 0.6819 106.05 105.7 106.38 7.6294E-06 181 33 7 0 0 0 0.0030249 3 60475 47.844 44.312 1 0.54039 0.42742 0 5079800 3635900 1443900 14774 588 5635 5767 23024;23025;23026 23025 GYGFITFSDSECAK 14 1 0 Unmodified _GYGFITFSDSECAK_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;A0A0U1RQW2 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.348 2 791.348131 1580.68171 69371.6 0.75285 0.00059577 -1.5645 -0.0012381 -0.81168 -0.00064232 791.348074439989 795.856930999125 105.83 0.78452 105.83 105.54 106.33 0 235 46 8 0 0 0 0.048111 1 59498 26.012 26.012 1 0.56535 0.44933 0 4035300 2470500 1564800 14775 588 5635 5767 23027 23027 GYGFVHFETQEAAER 15 0 1 Unmodified _GYGFVHFETQEAAER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;H0YBN4;E5RGH3 A0A087WTT1 A0A087WTT1 PABPC1 Polyadenylate-binding protein;Polyadenylate-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.273 3 580.937393 1739.79035 NaN NaN NaN 0.62415 0.00036259 NaN NaN NaN NaN 68.532 1.369 68.532 68.153 69.522 0 0 0 0 0.00017986 1 40558 69.594 60.311 1 NaN NaN 0 19248000 0 19248000 14776 273 5636 5768 23028 23028 GYGFVHFETQEAAER 15 0 1 Unmodified _GYGFVHFETQEAAER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;H0YBN4;E5RGH3 A0A087WTT1 A0A087WTT1 PABPC1 Polyadenylate-binding protein;Polyadenylate-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.9377 3 580.937393 1739.79035 80986.16 0.40499 0.00023527 0.53841 0.00031278 0.94339 0.00054805 581.271898489325 584.273698273591 79.816 0.62257 79.816 79.507 80.13 0 187 38 9 0 0 0 0.045993 1 43045 17.281 15.82 1 1.1197 0.93608 0 3571700 1608600 1963100 14777 273 5636 5768 23029 23029 GYGFVHFETQEAAER 15 0 1 Unmodified _GYGFVHFETQEAAER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;H0YBN4;E5RGH3 A0A087WTT1 A0A087WTT1 PABPC1 Polyadenylate-binding protein;Polyadenylate-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.9376 3 580.937393 1739.79035 80532.35 0.31663 0.00018394 0.2431 0.00014123 0.55974 0.00032517 580.937366160287 584.27366472857 79.914 0.51294 79.914 79.677 80.19 0 154 30 7 0 0 0 0.025184 1 42253 21.534 20.821 1 1.1439 0.96989 0 3069600 1537900 1531700 14778 273 5636 5768 23030 23030 GYGYGQGAGTLSTDK 15 1 0 Unmodified _GYGYGQGAGTLSTDK_ 0 0 0 Q6AI18;E9PP21;Q9BTA4;B4DY28;Q6ZMS3;P21291;B4E2T4;E9PS42;E9PND2;Q59EQ5 Q6AI18 Q6AI18 DKFZp686M148;CSRP1 Cysteine and glycine-rich protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8517 2 737.84407 1473.67359 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.55 1 41.55 41.05 42.05 0 0 0 0 0.00694 1 21918 51.218 34.644 1 14779 1050 5637 5769 23031 23031 GYLDDPTVPR 10 0 1 Unmodified _GYLDDPTVPR_ 0 0 0 Q2VF42;Q2Q9H2;Q2Q9B7;A8K8D9;P11413;Q0PHS1;E7EUI8;B4DYA7 Q2VF42 Q2VF42 G6PD Glucose-6-phosphate 1-dehydrogenase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.7904 2 566.785296 1131.55604 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.122 1 63.122 62.622 63.622 0 0 0 0 0.042499 1 37058 46.158 32.579 1 14780 775 5638 5770 23032 23032 GYLVTQDELDQTLEEFK 17 1 0 Unmodified _GYLVTQDELDQTLEEFK_ 0 0 0 A0A087WVZ9;E5KT65;P19388;A0A0A0MQR7 A0A087WVZ9 A0A087WVZ9 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1018.502 2 1014.49403 2026.97352 58786.38 0.54203 0.00054988 -0.70909 -0.00071937 -0.16707 -0.00016949 1014.49494161336 1018.50211438841 121.08 0.76277 121.08 120.79 121.55 7.6294E-06 215 49 7 0 0 0 7.1875E-13 2 80029 120.84 113.71 1 0.94075 0.94722 0 27094000 16768000 10327000 14781 423 5639 5771 23033;23034 23033 GYLVTQDELDQTLEEFK 17 1 0 Unmodified _GYLVTQDELDQTLEEFK_ 0 0 0 A0A087WVZ9;E5KT65;P19388;A0A0A0MQR7 A0A087WVZ9 A0A087WVZ9 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1014.4949 2 1014.49403 2026.97352 59656.55 0.86505 0.00087758 -0.48064 -0.00048761 0.3844 0.00038997 1014.49418739536 1019.00114534194 133.98 0.37827 133.98 133.78 134.16 0 94 18 8 0 0 0 7.0985E-06 2 80723 86.288 81.134 1 0.88535 0.72027 0 7061600 3637400 3424200 14782 423 5639 5771 23035;23036 23035 GYNATVLAYGQTGSGK 16 1 0 Unmodified _GYNATVLAYGQTGSGK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.8956 2 793.894094 1585.77364 67811.45 0.8277 0.00065711 0.038272 3.0384E-05 0.86597 0.00068749 793.894279619864 797.900912296961 63.841 1.0973 63.841 63.269 64.366 -3.8147E-06 509 101 8 0 0 0 4.6811E-13 2 36502 124.38 124.38 1 0.85928 0.97152 0 84672000 50733000 33940000 14783 1803 5640 5772 23037;23038 23037 GYNATVLAYGQTGSGK 16 1 0 Unmodified _GYNATVLAYGQTGSGK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.8948 2 793.894094 1585.77364 67329.34 0.58342 0.00046318 -0.0066291 -5.2628E-06 0.57679 0.00045791 793.893957060526 797.900952371094 62.816 1.1213 62.816 62.194 63.315 3.8147E-06 464 100 7 0 0 0 1.6908E-24 2 36667 138.89 136.03 1 0.82183 0.91847 0 96766000 51041000 45725000 14784 1803 5640 5772 23039;23040 23039 GYNATVLAYGQTGSGK 16 1 0 Unmodified _GYNATVLAYGQTGSGK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.8951 2 793.894094 1585.77364 67843.46 0.69003 0.00054781 0.068097 5.4062E-05 0.75813 0.00060187 793.894001448619 797.901148715713 73.814 0.99667 73.814 73.313 74.31 0 438 72 10 0 0 0 0.00015549 2 38986 72.681 72.681 1 1.5483 1.2696 0 36670000 14345000 22325000 14785 1803 5640 5772 23041;23042 23042 GYNATVLAYGQTGSGK 16 1 0 Unmodified _GYNATVLAYGQTGSGK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 797.9017 2 793.894094 1585.77364 68057.17 0.58984 0.00046827 -0.0021871 -1.7363E-06 0.58765 0.00046653 793.893859285284 797.901133423876 74.342 0.9293 74.342 73.798 74.728 0 479 64 12 0 0 0 0.00015298 2 38484 67.019 67.019 1 1.558 1.2909 0 34486000 13875000 20611000 14786 1803 5640 5772 23043;23044 23043 GYNDDYYEESYFTTR 15 0 1 Unmodified _GYNDDYYEESYFTTR_ 0 0 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.8949 2 961.889403 1921.76425 62964.27 0.50329 0.00048411 0.3299 0.00031733 0.83319 0.00080144 962.390870927599 966.894148807136 82.943 0.72144 82.943 82.611 83.333 0 354 61 8 0 0 0 1.8363E-10 2 49591 120.53 120.53 1 0.63883 0.65521 0 36113000 21256000 14856000 14787 1590 5641 5773 23045;23046 23046 GYNDDYYEESYFTTR 15 0 1 Unmodified _GYNDDYYEESYFTTR_ 0 0 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 962.393 2 961.889403 1921.76425 63277 0.39012 0.00037525 0.061707 5.9355E-05 0.45183 0.00043461 962.390676195746 967.395329327345 82.097 0.73579 82.097 81.746 82.481 0 342 65 7 0 0 0 0.00022093 3 49994 71.176 71.176 1 0.6824 0.75871 0 43295000 27378000 15918000 14788 1590 5641 5773 23047;23048;23049 23047 GYNDDYYEESYFTTR 15 0 1 Unmodified _GYNDDYYEESYFTTR_ 0 0 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 967.3962 2 961.889403 1921.76425 61883.43 0.24175 0.00023254 0.42103 0.00040498 0.66278 0.00063752 961.889192618631 966.894330302038 94.977 0.479 94.977 94.753 95.232 0 182 34 8 0 0 0 1.4735E-05 2 53195 89.43 89.43 1 0.64727 0.53181 0 11976000 7970300 4005500 14789 1590 5641 5773 23050;23051 23051 GYNDDYYEESYFTTR 15 0 1 Unmodified _GYNDDYYEESYFTTR_ 0 0 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.8932 2 961.889403 1921.76425 63254.24 0.1295 0.00012457 0.22712 0.00021847 0.35663 0.00034304 962.390306139152 966.894405037336 95.005 0.47978 95.005 94.826 95.306 0 186 33 8 0 0 0 0.00014503 1 52372 79.744 79.744 1 0.72199 0.58361 0 10685000 6497300 4187500 14790 1590 5641 5773 23052 23052 GYPDSESTWEPR 12 0 1 Unmodified _GYPDSESTWEPR_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.3099 2 712.309863 1422.60517 75852.4 0.58676 0.00041796 -0.12522 -8.9197E-05 0.46154 0.00032876 712.309773770098 717.314083262118 54.214 0.61721 54.214 53.973 54.59 0 167 53 5 0 0 0 0.00019323 1 30919 77.379 73.038 1 0.99282 0.99526 0 18034000 10167000 7867000 14791 1385 5642 5774 23053 23053 GYPDSESTWEPR 12 0 1 Unmodified _GYPDSESTWEPR_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.3109 2 712.309863 1422.60517 72685.63 0.57363 0.0004086 -0.20443 -0.00014561 0.36921 0.00026299 712.309922958593 717.314152460611 64.409 0.69696 64.409 64.127 64.824 0 254 50 8 0 0 0 0.00019951 3 33135 78.655 76.775 1 1.959 1.682 0 8159600 2991000 5168700 14792 1385 5642 5774 23054;23055;23056 23056 GYPDSESTWEPR 12 0 1 Unmodified _GYPDSESTWEPR_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.3152 2 712.309863 1422.60517 73292.21 0.42007 0.00029922 -0.20215 -0.00014399 0.21792 0.00015523 712.309868285422 717.314149136507 65.154 0.80478 65.154 64.744 65.549 0 231 60 6 0 0 0 0.017891 1 32719 41.164 41.164 1 2.0462 1.6977 0 5374700 1454900 3919800 14793 1385 5642 5774 23057 23057 GYPEVALHFVK 11 1 0 Unmodified _GYPEVALHFVK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.3507 2 630.342781 1258.67101 75007.14 0.52164 0.00032881 -0.58199 -0.00036685 -0.060348 -3.804E-05 630.341859695904 634.349714782532 83.24 0.54091 83.24 82.998 83.539 0 143 46 4 0 0 0 0.0011366 2 49873 69.812 51.948 1 1.2116 1.2712 0 16564000 7152400 9411200 14794 1607 5643 5775 23058;23059 23058 GYPSYPALIIDPK 13 1 0 Unmodified _GYPSYPALIIDPK_ 0 0 0 P55201;A0A024RCX0;Q9ULD4 P55201 P55201 BRPF1;BRPF3 Peregrin;Bromodomain and PHD finger-containing protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.3879 2 717.387385 1432.76022 NaN NaN NaN -0.53693 -0.00038519 NaN NaN NaN NaN 105.78 0.50142 105.78 105.49 105.99 0 0 0 0 0.053843 1 67231 39.625 28.795 1 NaN NaN 0 5697000 5697000 0 14795 1616 5644 5776 23060 23060 GYPSYPALIIDPK 13 1 0 Unmodified _GYPSYPALIIDPK_ 0 0 0 P55201;A0A024RCX0;Q9ULD4 P55201 P55201 BRPF1;BRPF3 Peregrin;Bromodomain and PHD finger-containing protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.3943 2 717.387385 1432.76022 NaN NaN NaN 0.32844 0.00023562 NaN NaN NaN NaN 117.68 0.48521 117.68 117.42 117.91 0 0 0 0 0.051491 1 68463 39.917 34.819 1 NaN NaN 0 3059600 0 3059600 14796 1616 5644 5776 23061 23061 GYSFTTTAER 10 0 1 Unmodified _GYSFTTTAER_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.7677 2 566.767103 1131.51965 79682.57 0.76973 0.00043626 -0.51523 -0.00029201 0.2545 0.00014424 566.767470879141 571.771047221624 42.55 1.3848 42.55 42.267 43.652 -3.8147E-06 878 112 11 0 0 0 2.043E-18 4 23041 163.15 154.24 1 1.8356 2.1917 0 3949500000 1335600000 2613900000 14797 1624;1656;2186 5645 5777 23062;23063;23064;23065 23065 GYSFTTTAER 10 0 1 Unmodified _GYSFTTTAER_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.7682 2 566.767103 1131.51965 81130.11 0.79453 0.00045031 1.1598 0.00065732 1.9543 0.0011076 566.766941572772 571.771064936195 43.608 0.51653 43.608 43.556 44.073 3.8147E-06 144 45 6 0 0 0 0.0021821 1 23513 70.256 66.669 1 1.6579 1.6988 0 26033000 9081800 16951000 14798 1624;1656;2186 5645 5777 23066 23066 GYSFTTTAER 10 0 1 Unmodified _GYSFTTTAER_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.7706 2 566.767103 1131.51965 NaN NaN NaN -1.0617 -0.00060173 NaN NaN NaN NaN 44.389 0.34863 44.389 44.231 44.579 0 0 0 0 0.019613 1 23901 54.722 38.52 1 NaN NaN 0 5731000 0 5731000 14799 1624;1656;2186 5645 5777 23067 23067 GYSFTTTAER 10 0 1 Unmodified _GYSFTTTAER_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.7676 2 566.767103 1131.51965 79841.34 0.69203 0.00039222 -0.46732 -0.00026486 0.22471 0.00012736 566.767324651231 571.770961944575 42.188 1.9601 42.188 41.389 43.35 0 1055 168 11 0 0 0 2.8615E-22 4 22825 166.52 157.6 1 1.8076 2.1606 0 3591000000 1318000000 2273000000 14800 1624;1656;2186 5645 5777 23068;23069;23070;23071 23071 GYSFTTTAER 10 0 1 Unmodified _GYSFTTTAER_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.7668 2 566.767103 1131.51965 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.166 1 43.166 42.666 43.666 0 0 0 0 0.002056 1 23396 68.016 30.995 1 14801 1624;1656;2186 5645 5777 23072 23072 GYSFTTTAER 10 0 1 Unmodified _GYSFTTTAER_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.7676 2 566.767103 1131.51965 78866.09 0.4384 0.00024847 -0.28276 -0.00016026 0.15564 8.8214E-05 566.76753443463 571.771261502491 49.797 2.4877 49.797 49.378 51.865 0 1065 194 12 0 0 0 0.0011058 5 24211 76.1 71.684 1 2.3915 2.0875 0 522400000 153480000 368920000 14802 1624;1656;2186 5645 5777 23073;23074;23075;23076;23077 23074 GYSFTTTAER 10 0 1 Unmodified _GYSFTTTAER_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.7716 2 566.767103 1131.51965 79561.18 0.20314 0.00011514 -0.16107 -9.1292E-05 0.04207 2.3844E-05 566.767660697644 571.771316119429 50.129 2.1929 50.129 49.639 51.832 0 1017 163 11 0 0 0 0.00085026 5 23813 80.219 74.871 1 2.3111 2.0198 0 422840000 125510000 297340000 14803 1624;1656;2186 5645 5777 23078;23079;23080;23081;23082 23078 GYSVEEVYDLAK 12 1 0 Unmodified _GYSVEEVYDLAK_ 0 0 0 Q14966;D6W5H1;A8K583;B4E187 Q14966 Q14966 ZNF638 Zinc finger protein 638 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.8408 2 686.835182 1371.65581 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.098 1 94.098 93.598 94.598 0 0 0 0 0.021127 1 58460 50.791 36.122 1 14804 1746 5646 5778 23083 23083 GYTLVEYETYK 11 1 0 Unmodified _GYTLVEYETYK_ 0 0 0 A0A023T787;Q9Y5S9;A0A0J9YW13 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3397 2 683.332276 1364.65 74835.52 0.36511 0.00024949 0.62608 0.00042782 0.99118 0.00067731 683.332051336726 687.339342263612 77.232 0.74447 77.232 76.877 77.622 0 310 63 8 0 0 0 1.9389E-13 3 45593 149.72 143.69 1 1.8719 2.0194 0 34407000 11072000 23336000 14805 4 5647 5779 23084;23085;23086 23086 GYTLVEYETYK 11 1 0 Unmodified _GYTLVEYETYK_ 0 0 0 A0A023T787;Q9Y5S9;A0A0J9YW13 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.333 2 683.332276 1364.65 74797.73 0.33585 0.0002295 0.64014 0.00043743 0.97599 0.00066693 683.332129560207 687.339343048672 76.204 0.79185 76.204 75.905 76.697 7.6294E-06 295 65 8 0 0 0 7.8857E-10 2 45912 125.56 123.86 1 1.7379 1.9072 0 41358000 15575000 25783000 14806 4 5647 5779 23087;23088 23087 GYTLVEYETYK 11 1 0 Unmodified _GYTLVEYETYK_ 0 0 0 A0A023T787;Q9Y5S9;A0A0J9YW13 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.3401 2 683.332276 1364.65 74689.65 0.85294 0.00058284 0.72132 0.0004929 1.5743 0.0010757 683.332041663372 687.339093507782 88.744 0.70428 88.744 88.509 89.214 0 199 45 7 0 0 0 0.00044305 2 48948 78.098 78.098 1 1.2634 0.99137 0 3925900 1861100 2064800 14807 4 5647 5779 23089;23090 23090 GYTLVEYETYK 11 1 0 Unmodified _GYTLVEYETYK_ 0 0 0 A0A023T787;Q9Y5S9;A0A0J9YW13 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.3384 2 683.332276 1364.65 NaN NaN NaN -0.1376 -9.4024E-05 NaN NaN NaN NaN 88.785 0.41082 88.785 88.575 88.986 7.6294E-06 0 0 0 0.0021944 1 48127 76.943 63.906 1 NaN NaN 0 1886100 0 1886100 14808 4 5647 5779 23091 23091 GYVGSIQPHGVFFR 14 0 1 Unmodified _GYVGSIQPHGVFFR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2742 3 521.940409 1562.7994 84877.05 0.76962 0.00040169 -0.53884 -0.00028124 0.23077 0.00012045 522.274119791114 525.276332228074 84.372 0.88071 84.372 84.039 84.92 0 309 69 6 0 0 0 0.0078283 1 50624 35.774 35.774 1 0.53165 0.58756 0 57253000 35959000 21294000 14809 1741 5648 5780 23092 23092 GYVGSIQPHGVFFR 14 0 1 Unmodified _GYVGSIQPHGVFFR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.9404 3 521.940409 1562.7994 85684.99 0.32761 0.00017099 0.10158 5.3016E-05 0.42918 0.00022401 521.940690209325 525.276249838921 82.747 0.7935 82.747 82.365 83.158 0 368 64 8 0 0 0 5.3492E-05 2 50616 71.548 71.548 1 1.1036 1.2162 0 41226000 17953000 23273000 14810 1741 5648 5780 23093;23094 23094 GYVGSIQPHGVFFR 14 0 1 Unmodified _GYVGSIQPHGVFFR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.2767 3 521.940409 1562.7994 83026.83 0.4701 0.00024536 -0.013548 -7.0712E-06 0.45655 0.00023829 521.940425047665 525.276340223901 95.691 0.92291 95.691 95.371 96.294 0 332 60 8 0 0 0 6.9724E-05 2 53509 65.563 65.563 1 1.3376 1.1076 0 11216000 4845500 6370800 14811 1741 5648 5780 23095;23096 23095 GYVGSIQPHGVFFR 14 0 1 Unmodified _GYVGSIQPHGVFFR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.2757 3 521.940409 1562.7994 84138.88 0.24098 0.00012578 0.19554 0.00010206 0.43651 0.00022783 521.940461833753 525.276456769046 95.367 0.68913 95.367 95.142 95.832 0 267 47 9 0 0 0 5.9909E-05 2 52568 54.524 54.524 1 1.3987 1.1332 0 10360000 4429300 5930700 14812 1741 5648 5780 23097;23098 23098 GYVGSIQPHGVFFR 14 0 1 Unmodified _GYVGSIQPHGVFFR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.9142 2 782.406975 1562.7994 70070.05 0.52631 0.00041179 0.51186 0.00040049 1.0382 0.00081228 782.408229644912 787.412201517341 95.394 0.41299 95.394 95.217 95.63 0 138 28 6 0 0 0 0.0091337 1 52574 42.718 42.718 1 1.5444 1.3168 0 3199300 1223600 1975700 14813 1741 5648 5780 23099 23099 GYYSPGIVSTR 11 0 1 Unmodified _GYYSPGIVSTR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.3109 2 600.306395 1198.59824 79439.97 0.67001 0.00040221 0.16181 9.7138E-05 0.83182 0.00049935 600.30598296378 605.310763496337 57.812 0.46201 57.812 57.572 58.034 0 130 36 5 0 0 0 0.00080839 1 32722 72.325 72.325 1 0.93591 0.97985 0 10853000 5203100 5649700 14814 1699 5649 5781 23100 23100 GYYSPGIVSTR 11 0 1 Unmodified _GYYSPGIVSTR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.312 2 600.306395 1198.59824 80134.53 0.73158 0.00043917 0.40014 0.00024021 1.1317 0.00067938 600.3061251377 605.310958070784 56.746 0.31412 56.746 56.606 56.92 0 76 23 4 0 0 0 0.00022163 1 32696 91.867 80.377 1 1.1762 1.1606 0 12879000 6387900 6491500 14815 1699 5649 5781 23101 23101 GYYSPGIVSTR 11 0 1 Unmodified _GYYSPGIVSTR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.3106 2 600.306395 1198.59824 79481.42 0.48235 0.00028956 -0.036028 -2.1628E-05 0.44632 0.00026793 600.306029978265 605.310575205473 67.759 0.38553 67.759 67.569 67.955 0 113 27 6 0 0 0 0.019604 2 34504 44.203 40.947 1 2.0278 1.8368 0 2186500 653110 1533400 14816 1699 5649 5781 23102;23103 23102 GYYSPYSVSGSGSTAGSR 18 0 1 Unmodified _GYYSPYSVSGSGSTAGSR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 891.9008 2 891.900105 1781.78566 63460.42 0.46685 0.00041638 0.18382 0.00016395 0.65067 0.00058034 892.401502892595 896.90448118644 52.085 0.50593 52.085 51.841 52.347 0 225 38 8 0 0 0 3.6886E-05 2 28836 62.042 60.04 1 1.8146 2.0082 0 60868000 22767000 38101000 14817 1754 5650 5782 23104;23105 23105 GYYSPYSVSGSGSTAGSR 18 0 1 Unmodified _GYYSPYSVSGSGSTAGSR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.9058 2 891.900105 1781.78566 65053.39 0.7881 0.00070291 -0.070212 -6.2622E-05 0.71789 0.00064028 892.401313050258 896.904253798618 50.913 0.55484 50.913 50.634 51.189 0 196 45 6 0 0 0 6.7917E-08 3 28659 93.011 93.011 1 1.7883 1.9488 0 29376000 10439000 18938000 14818 1754 5650 5782 23106;23107;23108 23106 HAALQDIGK 9 1 0 Unmodified _HAALQDIGK_ 0 0 0 B2RAR2;Q9ULX3;H3BUR4 B2RAR2 B2RAR2 NOB1 RNA-binding protein NOB1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.7712 2 476.764166 951.513779 88050.22 0.47707 0.00022745 -0.80987 -0.00038612 -0.33281 -0.00015867 476.763576942506 480.771113840614 24.25 0.50303 24.25 23.976 24.479 -1.9073E-06 54 21 5 0 0 0 0.00016983 1 10031 107.57 88.792 1 1.1421 1.2337 0 36774000 15189000 21585000 14819 874 5651 5783 23109 23109 HAALQDIGK 9 1 0 Unmodified _HAALQDIGK_ 0 0 0 B2RAR2;Q9ULX3;H3BUR4 B2RAR2 B2RAR2 NOB1 RNA-binding protein NOB1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.7715 2 476.764166 951.513779 88258.78 0.037706 1.7977E-05 -0.39507 -0.00018835 -0.35736 -0.00017038 476.7636900915 480.771306285207 23.625 0.42365 23.625 23.42 23.844 0 73 17 6 0 0 0 1.1919E-05 1 9479 125.16 99.221 1 1.3061 1.4386 0 43114000 19144000 23970000 14820 874 5651 5783 23110 23110 HAASTVQILGAEK 13 1 0 Unmodified _HAASTVQILGAEK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.8719 2 662.864608 1323.71466 74001.24 0.69455 0.00046039 0.0075211 4.9855E-06 0.70207 0.00046538 662.86463899031 666.871650277084 42.031 1.0375 42.031 41.745 42.783 0 415 79 10 0 0 0 6.3413E-75 2 22166 233.32 188.46 1 0.82076 0.9782 0 677020000 399360000 277670000 14821 2129 5652 5784 23111;23112 23111 HAASTVQILGAEK 13 1 0 Unmodified _HAASTVQILGAEK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.9167 3 442.245498 1323.71466 91153 0.11877 5.2525E-05 0.10855 4.8007E-05 0.22732 0.00010053 442.245480556612 444.916888523681 42.032 0.65683 42.032 41.788 42.444 0 211 47 6 0 0 0 1.7172E-06 1 22204 105.65 96.602 1 0.79519 0.89981 0 87327000 48132000 39195000 14822 2129 5652 5784 23113 23113 HAASTVQILGAEK 13 1 0 Unmodified _HAASTVQILGAEK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.8657 2 662.864608 1323.71466 73640.02 0.69331 0.00045957 -0.0047012 -3.1163E-06 0.68861 0.00045645 662.864599848567 666.871681359547 40.298 0.53344 40.298 39.981 40.515 -3.8147E-06 306 45 8 0 0 0 8.7929E-75 2 21342 221.8 177.48 1 0.81398 0.95505 0 335490000 180860000 154630000 14823 2129 5652 5784 23114;23115 23114 HAASTVQILGAEK 13 1 0 Unmodified _HAASTVQILGAEK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 444.9165 3 442.245498 1323.71466 91132.84 0.22575 9.9837E-05 -0.19476 -8.6131E-05 0.030991 1.3706E-05 442.245304658276 444.916822815752 40.211 0.45307 40.211 40.041 40.494 0 176 38 5 0 0 0 2.7209E-06 1 21464 101.53 91.999 1 0.83804 0.94369 0 57976000 34064000 23912000 14824 2129 5652 5784 23116 23116 HAASTVQILGAEK 13 1 0 Unmodified _HAASTVQILGAEK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.8737 2 662.864608 1323.71466 NaN NaN NaN 0.28918 0.00019169 NaN NaN NaN NaN 41.009 0.27188 41.009 40.883 41.155 0 0 0 0 1.866E-22 1 21968 143.42 101.09 1 NaN NaN 0 6263000 0 6263000 14825 2129 5652 5784 23117 23117 HAASTVQILGAEK 13 1 0 Unmodified _HAASTVQILGAEK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.6266 2 662.864608 1323.71466 73640.02 0.62453 0.00041398 0.18034 0.00011954 0.80487 0.00053352 662.864730794771 666.871746102876 40.549 0.64212 40.549 40.494 41.136 -3.8147E-06 225 48 8 0 0 0 0.0014994 1 21693 72.731 45.842 1 0.75725 0.88311 0 260240000 145640000 114600000 14826 2129 5652 5784 23118 23118 HAASTVQILGAEK 13 1 0 Unmodified _HAASTVQILGAEK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.8719 2 662.864608 1323.71466 74406.4 0.36053 0.00023898 0.26863 0.00017806 0.62916 0.00041705 662.864820348579 666.871813893283 48.026 1.9805 48.026 47.268 49.248 0 875 147 10 0 0 0 1.7229E-14 4 23504 150.49 112.93 1 0.99822 0.84711 0 60748000 29077000 31671000 14827 2129 5652 5784 23119;23120;23121;23122 23121 HAASTVQILGAEK 13 1 0 Unmodified _HAASTVQILGAEK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 444.9171 3 442.245498 1323.71466 90233.28 -0.23793 -0.00010522 0.20671 9.1417E-05 -0.031221 -1.3807E-05 442.245723433539 444.91682915666 47.984 1.188 47.984 47.404 48.592 0 303 85 6 0 0 0 0.0039977 2 23299 38.799 35.327 1 1.1371 0.9115 0 7443200 3599300 3843900 14828 2129 5652 5784 23123;23124 23123 HAASTVQILGAEK 13 1 0 Unmodified _HAASTVQILGAEK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.8724 2 662.864608 1323.71466 74205.66 0.26726 0.00017715 0.25318 0.00016782 0.52043 0.00034498 662.864764821513 666.871793420374 47.926 2.3354 47.926 47.099 49.434 -3.8147E-06 1061 189 9 0 0 0 1.2244E-18 3 22502 158.25 114.97 1 1.0128 0.83857 0 33729000 16428000 17301000 14829 2129 5652 5784 23125;23126;23127 23125 HAATAPPHSCPPDDTK 16 1 0 Unmodified _HAATAPPHSCPPDDTK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.9268 3 567.926499 1700.75767 82726.16 0.31589 0.0001794 -0.055259 -3.1383E-05 0.26064 0.00014802 567.926500138793 570.597657000589 15.358 0.28006 15.358 15.246 15.526 0 46 18 4 0 0 0 0.023113 1 3070 21.233 21.233 1 0.67691 0.75332 0 2556500 1709100 847420 14830 1681 5653 5785 23128 23128 HAATAPPHSCPPDDTK 16 1 0 Unmodified _HAATAPPHSCPPDDTK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.5977 3 567.926499 1700.75767 NaN NaN NaN -0.010335 -5.8694E-06 NaN NaN NaN NaN 16.359 0.4057 16.359 16.192 16.597 0 0 0 0 0.0028313 1 3205 48.823 44.021 1 NaN NaN 0 3800000 0 3800000 14831 1681 5653 5785 23129 23129 HAATAPPHSCPPDDTK 16 1 0 Unmodified _HAATAPPHSCPPDDTK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.9269 3 567.926499 1700.75767 78853.37 0.098139 5.5736E-05 0.1633 9.2742E-05 0.26144 0.00014848 568.260926528755 570.59806840816 16.366 0.46181 16.366 16.202 16.664 0 155 34 9 0 0 0 0.00071607 2 2844 41.378 41.378 1 1.3423 1.097 0 4754200 2220700 2533500 14832 1681 5653 5785 23130;23131 23131 HADNCAGPDGVEGENGGETK 20 1 0 Unmodified _HADNCAGPDGVEGENGGETK_ 0 0 0 P49711;B3KSE4 P49711 P49711 CTCF Transcriptional repressor CTCF MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.9454 3 671.944947 2012.81301 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.143 1 18.143 17.643 18.643 0 0 0 0 0.011446 1 5158 35.015 25.485 1 14833 1585 5654 5786 23132 23132 HADNCAGPDGVEGENGGETK 20 1 0 Unmodified _HADNCAGPDGVEGENGGETK_ 0 0 0 P49711;B3KSE4 P49711 P49711 CTCF Transcriptional repressor CTCF ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.9456 3 671.944947 2012.81301 NaN NaN NaN 0.40188 0.00027004 NaN NaN NaN NaN 18.109 0.20926 18.109 17.975 18.184 0 0 0 0 0.035332 1 4836 17.148 6.2036 1 NaN NaN 0 2809600 2809600 0 14834 1585 5654 5786 23133 23133 HAIPIIK 7 1 0 Unmodified _HAIPIIK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.2677 2 396.260531 790.506509 NaN NaN NaN 0.19601 7.7673E-05 NaN NaN NaN NaN 39.957 0.50867 39.957 39.718 40.226 0 0 0 0 0.031591 1 20709 83.229 57.12 1 NaN NaN 0 69218000 0 69218000 14835 522 5655 5787 23134 23134 HAIPIIK 7 1 0 Unmodified _HAIPIIK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2676 2 396.260531 790.506509 95011.2 0.072758 2.8831E-05 0.0026954 1.0681E-06 0.075453 2.9899E-05 396.260367613139 400.267516100154 37.887 0.53254 37.887 37.646 38.179 0 168 39 6 0 0 0 0.019549 2 19726 94.95 62.837 1 1.6845 1.903 0 129820000 49143000 80672000 14836 522 5655 5787 23135;23136 23135 HAIPIIK 7 1 0 Unmodified _HAIPIIK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 396.2607 2 396.260531 790.506509 96225.33 0.19474 7.7167E-05 -0.077166 -3.0578E-05 0.11757 4.6589E-05 396.26033197388 400.267503680761 44.132 0.83858 44.132 43.891 44.729 0 198 58 6 0 0 0 0.056893 1 20949 51.903 30.918 1 1.3593 1.0585 0 3729300 1685300 2044000 14837 522 5655 5787 23137 23137 HAIPIIK 7 1 0 Unmodified _HAIPIIK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 396.2604 2 396.260531 790.506509 95750.68 -0.10035 -3.9767E-05 0.11557 4.5796E-05 0.015215 6.0289E-06 396.260418718647 400.267562646403 43.608 1.0318 43.608 43.292 44.324 0 225 68 6 0 0 0 0.033053 1 20017 64.563 40.768 1 1.3343 1.0578 0 3154800 1557700 1597100 14838 522 5655 5787 23138 23138 HAIPNLVK 8 1 0 Unmodified _HAIPNLVK_ 0 0 0 Q7KZJ3;A0A024R4Z0;Q96FS1;Q68DU0;C9JZR2;O60716;A0A024R4Y7 Q7KZJ3 Q7KZJ3 CTNND1;DKFZp781O2021 Catenin delta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.2812 2 446.27417 890.533787 93228.13 0.55074 0.00024578 0.59229 0.00026432 1.143 0.00051011 446.274367367171 450.281392376251 38.16 0.3583 38.16 37.923 38.282 0 83 30 4 0 0 0 0.010089 1 19486 73.039 53.402 1 1.1282 1.1323 0 9888300 4275100 5613200 14839 165 5656 5788 23139 23139 HALFPELPK 9 1 0 Unmodified _HALFPELPK_ 0 0 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.3019 2 526.300384 1050.58622 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.727 1 76.727 76.227 77.227 0 0 0 0 0.036052 1 45263 51.066 31.972 1 14840 1974 5657 5789 23140 23140 HALFPELPK 9 1 0 Unmodified _HALFPELPK_ 0 0 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.3074 2 526.300384 1050.58622 NaN NaN NaN -0.057704 -3.0369E-05 NaN NaN NaN NaN 85.75 0.42933 85.75 85.633 86.063 0 0 0 0 0.019876 1 46147 58.981 49.393 1 NaN NaN 0 733020 0 733020 14841 1974 5657 5789 23141 23141 HALIIYDDLSK 11 1 0 Unmodified _HALIIYDDLSK_ 0 0 0 V9HW26;P25705 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.3506 2 644.350803 1286.68705 80651.84 0.73731 0.00047509 0.38514 0.00024817 1.1225 0.00072325 644.350349682607 648.358866283703 84.439 0.56658 84.439 84.276 84.843 0 84 38 4 0 0 0 0.0093307 1 45275 49.444 49.444 1 0.84712 0.72773 0 1399400 610170 789220 14842 1518 5658 5790 23142 23142 HAPINSAQHLDNVDQTGPK 19 1 0 Unmodified _HAPINSAQHLDNVDQTGPK_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3399 3 681.339848 2040.99772 78251.37 0.96503 0.00065751 -0.57027 -0.00038855 0.39475 0.00026896 681.673795350867 684.345037179597 31.357 0.22187 31.357 31.26 31.482 0 61 20 4 0 0 0 9.3041E-06 2 15451 56.121 56.121 1 1.0572 1.0967 0 12563000 6276100 6286800 14843 1380 5659 5791 23143;23144 23143 HAPINSAQHLDNVDQTGPK 19 1 0 Unmodified _HAPINSAQHLDNVDQTGPK_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.0106 3 681.339848 2040.99772 76971.05 0.49874 0.00033981 -0.28189 -0.00019206 0.21686 0.00014775 681.673659203282 684.345791083703 35.155 0.30253 35.155 35.004 35.306 0 78 28 4 0 0 0 0.036878 1 15594 8.4704 8.4704 1 0.75494 0.58786 0 3346300 1312300 2034000 14844 1380 5659 5791 23145 23145 HAPINSAQHLDNVDQTGPK 19 1 0 Unmodified _HAPINSAQHLDNVDQTGPK_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.3401 3 681.339848 2040.99772 73384.04 0.71078 0.00048428 -0.61358 -0.00041806 0.097197 6.6224E-05 681.673804333151 684.34484909997 34.689 0.54726 34.689 34.386 34.933 0 158 39 6 0 0 0 0.026408 3 14892 18.296 15.454 1 0.87932 0.69259 0 3253900 1619900 1634000 14845 1380 5659 5791 23146;23147;23148 23148 HAPLADQILAGNAVR 15 0 1 Unmodified _HAPLADQILAGNAVR_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.4327 2 773.428439 1544.84232 NaN NaN NaN 0.68535 0.00053007 NaN NaN NaN NaN 74.773 0.1375 74.773 74.695 74.833 0 0 0 0 0.0041604 1 43892 58.37 48.417 1 NaN NaN 0 2343000 0 2343000 14846 1724 5660 5792 23149 23149 HAPLADQILAGNAVR 15 0 1 Unmodified _HAPLADQILAGNAVR_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.9542 3 515.954718 1544.84232 86046.59 0.34845 0.00017978 -0.82752 -0.00042696 -0.47907 -0.00024718 516.288487117431 519.624962422378 84.35 0.63821 84.35 84.137 84.776 0 174 49 6 0 0 0 0.046683 1 46025 17.14 17.14 1 0.84897 0.71891 0 5000000 2508900 2491200 14847 1724 5660 5792 23150 23150 HAPLADQILAGNAVR 15 0 1 Unmodified _HAPLADQILAGNAVR_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.9539 3 515.954718 1544.84232 86858.26 0.46462 0.00023973 -0.6249 -0.00032242 -0.16028 -8.2696E-05 516.28856541511 519.290702548174 84.22 0.56532 84.22 83.97 84.535 0 143 45 4 0 0 0 0.018975 1 45102 22.803 22.803 1 0.92265 0.81549 0 3746400 1966300 1780200 14848 1724 5660 5792 23151 23151 HASPILPITEFSDIPR 16 0 1 Unmodified _HASPILPITEFSDIPR_ 0 0 0 A0A024RBE7;P42167;G5E972;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.661 3 598.324588 1791.95193 77983.91 0.89086 0.00053302 -0.1802 -0.00010782 0.71066 0.00042521 598.658704095238 601.660552824122 112.28 0.87526 112.28 111.85 112.73 0 372 62 8 0 0 0 4.0685E-09 2 70928 84.508 84.508 1 1.0286 1.0523 0 32481000 16314000 16167000 14849 334 5661 5793 23152;23153 23153 HASPILPITEFSDIPR 16 0 1 Unmodified _HASPILPITEFSDIPR_ 0 0 0 A0A024RBE7;P42167;G5E972;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.3246 3 598.324588 1791.95193 77131.98 0.75288 0.00045047 0.21707 0.00012988 0.96995 0.00058034 598.324616903467 601.660777708465 111.19 0.81327 111.19 110.76 111.58 0 293 57 6 0 0 0 9.1116E-13 3 71542 93.51 93.51 1 1.0826 1.2216 0 47005000 21334000 25671000 14850 334 5661 5793 23154;23155;23156 23156 HASPILPITEFSDIPR 16 0 1 Unmodified _HASPILPITEFSDIPR_ 0 0 0 A0A024RBE7;P42167;G5E972;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.4894 2 896.983244 1791.95193 NaN NaN NaN 0.14002 0.0001256 NaN NaN NaN NaN 111.2 0.69804 111.2 110.86 111.56 0 0 0 0 1.5139E-08 1 71733 96.604 80.072 1 NaN NaN 0 14526000 0 14526000 14851 334 5661 5793 23157 23157 HASPILPITEFSDIPR 16 0 1 Unmodified _HASPILPITEFSDIPR_ 0 0 0 A0A024RBE7;P42167;G5E972;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.9833 2 896.983244 1791.95193 64153.8 0.64177 0.00057566 -0.36294 -0.00032555 0.27883 0.00025011 896.982738593667 901.9866306444 121.93 0.73566 121.93 121.73 122.46 0 125 36 7 0 0 0 0.0020519 1 72645 42.556 42.556 1 1.3745 1.182 0 7717700 3710400 4007300 14852 334 5661 5793 23158 23158 HASPILPITEFSDIPR 16 0 1 Unmodified _HASPILPITEFSDIPR_ 0 0 0 A0A024RBE7;P42167;G5E972;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 896.9834 2 896.983244 1791.95193 63939.45 0.47775 0.00042854 0.18355 0.00016464 0.6613 0.00059317 897.484769661546 901.987242888157 121.7 0.47562 121.7 121.47 121.94 7.6294E-06 126 22 8 0 0 0 0.00021471 3 71496 59.198 59.198 1 1.2653 1.0347 0 9139100 4459800 4679300 14853 334 5661 5793 23159;23160;23161 23160 HASPILPITEFSDIPR 16 0 1 Unmodified _HASPILPITEFSDIPR_ 0 0 0 A0A024RBE7;P42167;G5E972;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.6617 3 598.324588 1791.95193 76890.69 0.87038 0.00052077 0.20406 0.0001221 1.0744 0.00064286 598.659132715565 601.660756860048 121.67 0.53513 121.67 121.43 121.97 0 165 25 8 0 0 0 0.002742 1 71665 23.33 19.427 1 1.3146 1.0729 0 12869000 5473700 7395100 14854 334 5661 5793 23162 23162 HATAEEVEEEER 12 0 1 Unmodified _HATAEEVEEEER_ 0 0 0 Q8TDN6;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.8201 2 714.81551 1427.61647 73161.98 0.69684 0.00049811 0.04263 3.0473E-05 0.73947 0.00052858 714.815622730641 719.820008790411 19.6 0.23136 19.6 19.505 19.736 0 67 19 5 0 0 0 1.0743E-19 2 6165 150.46 144.15 1 0.70543 0.74142 0 11249000 7102200 4147100 14855 1934 5662 5794 23163;23164 23163 HATAEEVEEEER 12 0 1 Unmodified _HATAEEVEEEER_ 0 0 0 Q8TDN6;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.3185 2 714.81551 1427.61647 73739.73 0.1935 0.00013832 0.22292 0.00015935 0.41642 0.00029766 714.815311080295 719.819962292847 19.185 0.37024 19.185 19.051 19.421 0 41 13 6 0 0 0 0.011503 2 5617 45.661 38.857 1 0.7645 0.79368 0 21988000 12325000 9662500 14856 1934 5662 5794 23165;23166 23165 HAVSDPSILDSLDLNEDEREVLINNINR 28 0 2 Unmodified _HAVSDPSILDSLDLNEDEREVLINNINR_ 0 0 1 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 798.6566 4 798.404826 3189.5902 67535.38 0.97095 0.00077521 -0.28628 -0.00022857 0.68467 0.00054664 798.65567858597 803.406776659128 126.29 0.38214 126.29 126.04 126.42 0 64 13 9 0 0 0 0.016126 1 75986 18.356 18.356 1 0.77846 0.66718 0 5708500 2918600 2789900 14857 1445 5663 5795 23167 23167 HAVSEGTKAVTKYTSSK 17 3 0 Unmodified _HAVSEGTKAVTKYTSSK_ 0 0 2 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;L0R4T3;Q16778;P33778;P23527;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.9857 3 598.651252 1792.93193 77317.86 0.2423 0.00014505 0.03273 1.9594E-05 0.27503 0.00016465 598.985471957694 606.665552355032 22.07 0.36944 22.07 21.912 22.281 0 80 20 7 0 0 0 0.02831 1 8242 16.357 16.357 1 0.82919 0.99805 0 26010000 13387000 12622000 14858 34;1513 5664 5796 23168 23168 HAVSEGTKAVTKYTSSK 17 3 0 Unmodified _HAVSEGTKAVTKYTSSK_ 0 0 2 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;L0R4T3;Q16778;P33778;P23527;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.986 3 598.651252 1792.93193 77581.22 0.46428 0.00027794 -0.0023346 -1.3976E-06 0.46194 0.00027654 598.651149739595 606.665548454583 21.075 0.3032 21.075 20.94 21.243 0 81 15 7 0 0 0 0.035583 1 7270 14.959 14.959 1 0.91313 1.0673 0 45418000 24605000 20813000 14859 34;1513 5664 5796 23169 23169 HAVTEAEIQQLK 12 1 0 Unmodified _HAVTEAEIQQLK_ 0 0 0 D3DTX6;Q96SB3;B3KNT0;Q96B17 D3DTX6 D3DTX6 PPP1R9B Neurabin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.8776 2 683.869891 1365.72523 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.747 1 44.747 44.247 45.247 0 0 0 0 0.030341 1 24060 45.598 34.447 1 14860 1190 5665 5797 23170 23170 HCAPSGTPTGPEILAAAVPPSSLK 24 1 0 Unmodified _HCAPSGTPTGPEILAAAVPPSSLK_ 0 0 0 Q8NDD1;Q5TBH9;Q5TBI2;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 787.0486 3 786.742253 2357.20493 67739.52 0.92642 0.00072885 -0.73918 -0.00058155 0.18723 0.00014731 787.07555637806 789.747666120682 112.58 0.82133 112.58 112.29 113.11 7.6294E-06 149 40 5 0 0 0 0.0013176 1 65544 36.9 36.9 1 1.3024 1.0446 0 7551300 4277700 3273500 14861 1925 5666 5798 23171 23171 HCAPSGTPTGPEILAAAVPPSSLK 24 1 0 Unmodified _HCAPSGTPTGPEILAAAVPPSSLK_ 0 0 0 Q8NDD1;Q5TBH9;Q5TBI2;B4E0F7 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.0774 3 786.742253 2357.20493 67494.77 0.73231 0.00057614 -0.38833 -0.00030551 0.34399 0.00027063 787.076002081172 789.747962361588 112.44 0.96201 112.44 112.06 113.03 -7.6294E-06 186 48 7 0 0 0 2.3374E-09 2 64390 55.734 55.734 1 1.2316 1.0078 0 8430000 3828100 4601900 14862 1925 5666 5798 23172;23173 23173 HCCSTADFGDLPLLPPTSR 19 0 1 Unmodified _HCCSTADFGDLPLLPPTSR_ 0 0 0 Q7Z5J4;A8MXE8 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.6714 3 715.334829 2142.98266 76373.68 0.76886 0.00054999 -0.56097 -0.00040128 0.20789 0.00014871 715.669085418046 719.005531522223 115.29 0.47527 115.29 115.07 115.55 0 93 22 8 0 0 0 0.052674 1 66613 11.46 11.371 1 1.8269 1.5696 0 1717300 695990 1021300 14863 1879 5667 5799 23174 23174 HCLGVFFPVFAYASR 15 0 1 Unmodified _HCLGVFFPVFAYASR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.9699 3 590.964337 1769.87118 81475.41 0.70364 0.00041583 0.032858 1.9418E-05 0.7365 0.00043524 591.29851188521 594.300575528382 122.66 0.58571 122.66 122.3 122.88 0 163 42 6 0 0 0 0.00016486 3 79366 50.155 50.155 1 0.78703 0.78491 0 8700600 3189200 5511300 14864 1995 5668 5800 23175;23176;23177 23177 HCLGVFFPVFAYASR 15 0 1 Unmodified _HCLGVFFPVFAYASR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.301 3 590.964337 1769.87118 79203.52 0.73302 0.00043319 -0.30683 -0.00018132 0.42619 0.00025186 591.298487463688 594.63466657318 121.73 0.95978 121.73 121.34 122.3 0 303 70 8 0 0 0 3.8133E-05 2 80491 69.92 69.92 1 0.78857 0.78867 0 16982000 9748400 7234000 14865 1995 5668 5800 23178;23179 23179 HCLGVFFPVFAYASR 15 0 1 Unmodified _HCLGVFFPVFAYASR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 890.9478 2 885.942867 1769.87118 NaN NaN NaN 0.054665 4.843E-05 NaN NaN NaN NaN 121.7 0.57609 121.7 121.51 122.09 0 0 0 0 0.0052546 1 80586 55.401 39.536 1 NaN NaN 0 4038000 0 4038000 14866 1995 5668 5800 23180 23180 HCLGVFFPVFAYASR 15 0 1 Unmodified _HCLGVFFPVFAYASR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 891.4512 2 885.942867 1769.87118 64673.04 0.85981 0.00076174 0.0838 7.4242E-05 0.94361 0.00083599 886.444536716733 891.448751743375 133.11 0.92191 133.11 132.89 133.81 0 178 41 7 0 0 0 0.010817 1 80932 34.773 32.547 1 1.6497 1.3888 0 4560400 1842900 2717600 14867 1995 5668 5800 23181 23181 HCLGVFFPVFAYASR 15 0 1 Unmodified _HCLGVFFPVFAYASR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.6354 3 590.964337 1769.87118 78733.71 0.8991 0.00053134 -0.26614 -0.00015728 0.63297 0.00037406 590.964079956112 594.634637635826 133.17 1.4292 133.17 132.82 134.25 0 355 63 9 0 0 0 0.00041596 4 80981 37.555 37.555 1 1.589 1.3499 0 9168700 3714300 5454500 14868 1995 5668 5800 23182;23183;23184;23185 23182 HCLGVFFPVFAYASR 15 0 1 Unmodified _HCLGVFFPVFAYASR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.301 3 590.964337 1769.87118 78994.71 1.1235 0.00066396 -0.32777 -0.0001937 0.79574 0.00047025 591.29842020248 594.300250241142 132.84 1.1518 132.84 132.5 133.65 0 282 48 8 0 0 0 9.2426E-05 3 79814 47.532 47.532 1 1.5013 1.2161 0 11821000 4494800 7325800 14869 1995 5668 5800 23186;23187;23188 23186 HCLGVFFPVFAYASR 15 0 1 Unmodified _HCLGVFFPVFAYASR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 891.4489 2 885.942867 1769.87118 65532.06 0.80804 0.00071587 0.53745 0.00047615 1.3455 0.001192 885.942844685138 891.448599447937 132.78 0.98267 132.78 132.52 133.5 0 181 41 7 0 0 0 0.00067637 2 79863 52.391 49.069 1 1.5458 1.2869 0 6220100 2730400 3489700 14870 1995 5668 5800 23189;23190 23189 HCLNACIQR 9 0 1 Unmodified _HCLNACIQR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.2769 2 586.276592 1170.53863 NaN NaN NaN -0.68521 -0.00040172 NaN NaN NaN NaN 22.398 0.30316 22.398 22.285 22.588 0 0 0 0 0.030378 1 8424 53.351 37.689 1 NaN NaN 0 2566000 2566000 0 14871 1887 5669 5801 23191 23191 HCNMVLENVK 10 1 0 Oxidation (M) _HCNM(ox)VLENVK_ HCNM(1)VLENVK HCNM(75.39)VLENVK 0 1 0 P62316 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.2972 2 630.29719 1258.57983 NaN NaN NaN 0.32814 0.00020682 NaN NaN NaN NaN 24.579 0.31479 24.579 24.393 24.708 0 0 0 0 0.0011644 1 10340 75.387 60.127 1 NaN NaN 0 9788400 9788400 0 14872 1645 5670 5802 23192 23192 1425 HCNMVLENVK 10 1 0 Oxidation (M) _HCNM(ox)VLENVK_ HCNM(1)VLENVK HCNM(73.89)VLENVK 0 1 0 P62316 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3047 2 630.29719 1258.57983 NaN NaN NaN -0.54081 -0.00034087 NaN NaN NaN NaN 23.89 0.3704 23.89 23.725 24.095 0 0 0 0 0.0012839 1 9790 73.885 58.004 1 NaN NaN 0 9708500 0 9708500 14873 1645 5670 5802 23193 23193 1425 HDELADSLPCAEGEFIFLR 19 0 1 Unmodified _HDELADSLPCAEGEFIFLR_ 0 0 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.6868 3 740.352766 2218.03647 73124.2 0.94399 0.00069889 -0.93696 -0.00069368 0.0070363 5.2094E-06 740.35218322325 744.02232215147 131.88 0.48682 131.88 131.65 132.14 0 79 22 6 0 0 0 0.0032494 1 80160 25.586 25.586 1 0.95995 0.8463 0 1406800 694060 712770 14874 903 5671 5803 23194 23194 HDIPDLGTMSEAK 13 1 0 Oxidation (M) _HDIPDLGTM(ox)SEAK_ HDIPDLGTM(1)SEAK HDIPDLGTM(69.82)SEAK 0 1 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.3424 2 715.335024 1428.65549 71683.69 0.49646 0.00035514 0.12523 8.9579E-05 0.62169 0.00044472 715.335091046996 719.342160956604 37.948 0.45368 37.948 37.749 38.203 0 163 33 7 0 0 0 0.00010373 1 19759 69.815 58.664 1 1.2638 1.4166 0 79841000 34937000 44904000 14875 1286 5672 5804 23195 23195 983 HDLDLICR 8 0 1 Unmodified _HDLDLICR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.2611 2 521.260933 1040.50731 83213.16 0.73793 0.00038465 0.031769 1.656E-05 0.7697 0.00040121 521.260866497956 526.265209278292 49.977 0.64929 49.977 49.629 50.279 -3.8147E-06 291 54 8 0 0 0 0.0073633 2 27435 83.265 63.488 1 1.1014 1.2648 0 139610000 67148000 72459000 14876 1632;343;1633 5673 5805 23196;23197 23197 HDLDLICR 8 0 1 Unmodified _HDLDLICR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.2616 2 521.260933 1040.50731 83220.34 0.40772 0.00021253 -0.093924 -4.8959E-05 0.3138 0.00016357 521.260850379707 526.26501936092 48.124 0.79194 48.124 47.806 48.598 -3.8147E-06 222 54 8 0 0 0 8.063E-21 2 26758 178.08 131.66 1 1.0295 1.1783 0 163560000 78399000 85165000 14877 1632;343;1633 5673 5805 23198;23199 23198 HDLDLICR 8 0 1 Unmodified _HDLDLICR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.2651 2 521.260933 1040.50731 80868.42 0.32116 0.00016741 -0.27472 -0.0001432 0.046436 2.4205E-05 521.260901993837 526.264924402493 56.255 1.8023 56.255 55.839 57.642 0 482 121 8 0 0 0 0.035324 2 28170 49.097 43.058 1 2.1415 1.7958 0 25606000 8097100 17509000 14878 1632;343;1633 5673 5805 23200;23201 23200 HDLDLICR 8 0 1 Unmodified _HDLDLICR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3;V9HW04;P62140;B4DJ75;B7ZB67 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.2612 2 521.260933 1040.50731 82507.19 0.3765 0.00019625 -0.38608 -0.00020125 -0.009584 -4.9958E-06 521.260872005538 526.26487247028 56.416 1.8987 56.416 55.992 57.891 0 527 132 8 0 0 0 0.0098174 2 27710 73.665 60.287 1 2.1323 1.8143 0 19405000 6018400 13386000 14879 1632;343;1633 5673 5805 23202;23203 23203 HDLLTEPDLGVTIDLINPDTYR 22 0 1 Unmodified _HDLLTEPDLGVTIDLINPDTYR_ 0 0 0 A0A024R0H6;Q8N7H5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 841.102 3 837.430621 2509.27003 67717.58 0.74783 0.00062626 -0.037995 -3.1819E-05 0.70984 0.00059444 837.764612608686 840.766372490429 129.82 0.43956 129.82 129.67 130.11 0 66 30 4 0 0 0 5.3842E-08 2 86821 60.602 60.602 1 1.1153 1.1251 0 6087100 2624600 3462500 14880 46 5674 5806 23204;23205 23205 HDLPLHPAVVK 11 1 0 Unmodified _HDLPLHPAVVK_ 0 0 0 Q9NY93;Q53HB9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.9118 3 409.239907 1224.69789 94483.31 0.31198 0.00012767 -0.49994 -0.0002046 -0.18796 -7.6922E-05 409.574253807716 411.911281041512 46.526 0.60752 46.526 46.232 46.839 0 224 51 7 0 0 0 0.00047911 1 25114 66.595 66.595 1 1.2099 1.3068 0 42313000 19703000 22610000 14881 2081 5675 5807 23206 23206 HDLPLHPAVVK 11 1 0 Unmodified _HDLPLHPAVVK_ 0 0 0 Q9NY93;Q53HB9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.7154 3 409.239907 1224.69789 92479.86 0.22479 9.1992E-05 0.22814 9.3364E-05 0.45293 0.00018536 409.239939845825 411.911478286041 42.863 0.72895 42.863 42.459 43.188 0 199 59 6 0 0 0 0.040932 1 23225 41.164 41.164 1 0.95328 0.97505 0 25692000 15773000 9918300 14882 2081 5675 5807 23207 23207 HDLPLHPAVVK 11 1 0 Unmodified _HDLPLHPAVVK_ 0 0 0 Q9NY93;Q53HB9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 411.9116 3 409.239907 1224.69789 92284.73 -0.15154 -6.2016E-05 0.23528 9.6287E-05 0.083743 3.4271E-05 409.239924715423 411.911433249548 50.053 0.85161 50.053 49.783 50.634 3.8147E-06 286 71 6 0 0 0 0.014407 1 24482 35.138 35.138 1 1.2402 0.97436 0 3958200 1721100 2237200 14883 2081 5675 5807 23208 23208 HDNLLHGTK 9 1 0 Unmodified _HDNLLHGTK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46;Q7Z6P5 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 348.1886 3 345.51744 1033.53049 106847.7 -0.24479 -8.4578E-05 -0.13616 -4.7045E-05 -0.38095 -0.00013162 345.517188768707 348.188908469172 19.044 0.22664 19.044 18.913 19.139 0 45 17 4 0 0 0 0.041777 1 5819 20.336 16.834 1 1.1734 1.1869 0 4754700 2414600 2340200 14884 568 5676 5808 23209 23209 HDNTVITAVNNMTLK 15 1 0 Oxidation (M) _HDNTVITAVNNM(ox)TLK_ HDNTVITAVNNM(1)TLK HDNTVITAVNNM(100.22)TLK 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.9372 2 843.927611 1685.84067 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.53 1 54.53 54.03 55.03 0 0 0 0 2.3493E-07 1 30675 100.22 83.969 1 14885 1942 5677 5809 23210 23210 1779 HDNTVITAVNNMTLK 15 1 0 Oxidation (M) _HDNTVITAVNNM(ox)TLK_ HDNTVITAVNNM(1)TLK HDNTVITAVNNM(85.46)TLK 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.9343 2 843.927611 1685.84067 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.653 1 54.653 54.153 55.153 3.8147E-06 0 0 0 9.57E-05 1 30742 85.457 69.568 1 14886 1942 5677 5809 23211 23211 1779 HDNTVITAVNNMTLK 15 1 0 Oxidation (M) _HDNTVITAVNNM(ox)TLK_ HDNTVITAVNNM(1)TLK HDNTVITAVNNM(107.65)TLK 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.9341 2 843.927611 1685.84067 68478.98 0.17332 0.00014627 0.12762 0.0001077 0.30094 0.00025397 844.428843903307 847.934548806572 53.272 0.35999 53.272 53.127 53.487 3.8147E-06 72 33 4 0 0 0 1.196E-07 1 30393 107.65 107.65 1 1.4054 1.4231 0 13008000 4383100 8624700 14887 1942 5677 5809 23212 23212 1779 HDVGLPGVSR 10 0 1 Unmodified _HDVGLPGVSR_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.7805 2 518.780348 1035.54614 83890.54 0.46235 0.00023986 0.26713 0.00013858 0.72947 0.00037844 518.78000641894 523.785030447001 40.393 0.43389 40.393 40.274 40.708 -3.8147E-06 123 38 6 0 0 0 0.00088498 2 21142 91.867 83.927 1 1.0295 1.0905 0 41421000 20344000 21077000 14888 790 5678 5810 23213;23214 23213 HDYALLIK 8 1 0 Unmodified _HDYALLIK_ 0 0 0 REV__B9A063 REV__B9A063 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 324.8551 3 324.855282 971.544017 104864.4 0.37753 0.00012264 -0.46767 -0.00015192 -0.090139 -2.9282E-05 324.855222355572 327.526427116528 41.517 0.88446 41.517 41.225 42.11 0 506 72 9 0 0 0 0.0027241 3 21749 67.981 35.271 1 0.63246 0.75989 0 1139400000 713200000 426190000 + 14889 2168 5679 5811 23215;23216;23217 23215 HDYALLIK 8 1 0 Unmodified _HDYALLIK_ 0 0 0 REV__B9A063 REV__B9A063 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 324.8556 3 324.855282 971.544017 104367.6 0.44415 0.00014428 -0.20986 -6.8173E-05 0.23429 7.6111E-05 324.855256343539 327.526520692283 39.856 1.2869 39.856 39.612 40.899 0 563 105 8 0 0 0 0.0014569 4 21621 81.784 41.389 1 0.60741 0.71689 0 938140000 539620000 398510000 + 14890 2168 5679 5811 23218;23219;23220;23221 23221 HDYALLIK 8 1 0 Unmodified _HDYALLIK_ 0 0 0 REV__B9A063 REV__B9A063 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 324.8553 3 324.855282 971.544017 104135.4 -0.26556 -8.6268E-05 0.12262 3.9834E-05 -0.14294 -4.6434E-05 324.855303409512 327.526633541953 46.823 1.8772 46.823 46.599 48.476 0 702 135 9 0 0 0 0.012586 2 22585 42.109 21.162 1 0.81876 0.69838 0 64852000 32450000 32401000 + 14891 2168 5679 5811 23222;23223 23223 HEAMITDLEER 11 0 1 Oxidation (M) _HEAM(ox)ITDLEER_ HEAM(1)ITDLEER HEAM(139.86)ITDLEER 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.3187 2 680.314091 1358.61363 72959.45 0.59966 0.00040796 -0.26245 -0.00017855 0.3372 0.00022941 680.313753820222 685.318274146289 36.683 0.4831 36.683 36.475 36.958 0 168 44 6 0 0 0 1.1826E-12 2 18528 139.86 126.5 1 2.2088 2.2989 0 38206000 13147000 25059000 14892 81 5680 5812 23224;23225 23224 57 HEAMITDLEER 11 0 1 Oxidation (M) _HEAM(ox)ITDLEER_ HEAM(1)ITDLEER HEAM(94.69)ITDLEER 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.8214 2 680.314091 1358.61363 73948.32 0.60583 0.00041216 0.2601 0.00017695 0.86594 0.00058911 680.314062531186 685.318614672455 37.652 0.6463 37.652 37.336 37.982 0 246 53 8 0 0 0 7.5764E-05 3 19088 94.692 83.528 1 1.752 1.8675 0 43820000 15420000 28401000 14893 81 5680 5812 23226;23227;23228 23226 57 HEAMITDLEER 11 0 1 Oxidation (M) _HEAM(ox)ITDLEER_ HEAM(1)ITDLEER HEAM(65.54)ITDLEER 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.3194 2 680.314091 1358.61363 72949.48 1.4069 0.00095714 0.23851 0.00016226 1.6454 0.0011194 680.314145204283 685.318427886279 35.233 0.6079 35.233 35.094 35.702 0 206 56 5 0 0 0 0.00082125 1 18194 65.535 55.754 1 2.3569 2.6024 0 41670000 11716000 29954000 14894 81 5680 5812 23229 23229 57 HEAMITDLEER 11 0 1 Oxidation (M) _HEAM(ox)ITDLEER_ HEAM(1)ITDLEER HEAM(128.81)ITDLEER 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.3146 2 680.314091 1358.61363 73987.59 0.80341 0.00054657 0.26738 0.00018191 1.0708 0.00072847 680.31385432408 685.318647082678 36.288 0.51166 36.288 36.013 36.525 0 175 44 7 0 0 0 2.8218E-10 2 18602 128.81 117.65 1 2.2845 2.5836 0 47581000 15816000 31765000 14895 81 5680 5812 23230;23231 23231 57 HEAMITDLEER 11 0 1 Oxidation (M) _HEAM(ox)ITDLEER_ HEAM(1)ITDLEER HEAM(50.35)ITDLEER 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.3195 2 680.314091 1358.61363 74438.77 0.54792 0.00037276 0.63155 0.00042965 1.1795 0.00080241 680.314371179968 685.318709546461 42.862 0.60501 42.862 42.589 43.194 0 153 35 6 0 0 0 0.0042081 2 20039 50.353 47.375 1 1.8453 1.5427 0 3586700 1227200 2359500 14896 81 5680 5812 23232;23233 23232 57 HEAMITDLEER 11 0 1 Oxidation (M) _HEAM(ox)ITDLEER_ HEAM(1)ITDLEER HEAM(63.32)ITDLEER 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.3182 2 680.314091 1358.61363 74113.02 0.25987 0.0001768 0.76392 0.0005197 1.0238 0.0006965 680.314353532546 685.318829225352 42.875 0.84849 42.875 42.475 43.323 0 173 51 6 0 0 0 0.00096141 1 19502 63.32 55.675 1 2.1238 1.8113 0 2916700 970050 1946600 14897 81 5680 5812 23234 23234 57 HEASDFPCR 9 0 1 Unmodified _HEASDFPCR_ 0 0 0 A8K3M3;P18031 A8K3M3 A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.7424 2 559.737822 1117.46109 83301.97 0.41568 0.00023267 0.11937 6.6816E-05 0.53505 0.00029949 559.737773427345 564.742163937156 20.678 0.31043 20.678 20.534 20.844 0 42 12 6 0 0 0 0.002124 1 7075 76.478 74.612 1 1.2193 1.2413 0 7103300 3656600 3446700 14898 724 5681 5813 23235 23235 HEASDFPCR 9 0 1 Unmodified _HEASDFPCR_ 0 0 0 A8K3M3;P18031 A8K3M3 A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.7417 2 559.737822 1117.46109 82404.34 0.4988 0.00027919 0.14181 7.9374E-05 0.6406 0.00035857 559.737843921129 564.742109690213 20.376 0.22584 20.376 20.224 20.45 0 23 7 5 0 0 0 0.00034217 1 6702 101.43 98.424 1 1.1919 1.1927 0 6877900 3692200 3185700 14899 724 5681 5813 23236 23236 HECGAAFTSK 10 1 0 Unmodified _HECGAAFTSK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.248 2 554.248023 1106.48149 83289.09 0.28052 0.00015548 0.47794 0.0002649 0.75846 0.00042038 554.247858182509 558.255591772913 17.382 0.35103 17.382 17.266 17.617 0 49 13 6 0 0 0 0.0026988 1 4597 67.897 56.304 1 1.032 1.0554 0 17745000 8492100 9253200 14900 1718 5682 5814 23237 23237 HECQANGPEDLNR 13 0 1 Unmodified _HECQANGPEDLNR_ 0 0 0 B7Z9M9;V9HWA6;P60981 B7Z9M9 B7Z9M9 HEL32;DSTN Destrin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.3401 2 770.333878 1538.6532 NaN NaN NaN 0.46649 0.00035935 NaN NaN NaN NaN 18.721 0.39339 18.721 18.572 18.966 0 0 0 0 0.00051786 1 5581 83.045 79.158 1 NaN NaN 0 5094500 0 5094500 14901 1108 5683 5815 23238 23238 HECQANGPEDLNR 13 0 1 Unmodified _HECQANGPEDLNR_ 0 0 0 B7Z9M9;V9HWA6;P60981 B7Z9M9 B7Z9M9 HEL32;DSTN Destrin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.3385 2 770.333878 1538.6532 NaN NaN NaN -0.22799 -0.00017563 NaN NaN NaN NaN 18.769 0.43671 18.769 18.574 19.01 0 0 0 0 1.5941E-14 1 5311 128.85 124.8 1 NaN NaN 0 6504300 0 6504300 14902 1108 5683 5815 23239 23239 HECQANGPEDLNR 13 0 1 Unmodified _HECQANGPEDLNR_ 0 0 0 B7Z9M9;V9HWA6;P60981 B7Z9M9 B7Z9M9 HEL32;DSTN Destrin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.2277 3 513.891677 1538.6532 NaN NaN NaN -0.69042 -0.0003548 NaN NaN NaN NaN 18.724 0.40148 18.724 18.574 18.975 0 0 0 0 0.0010649 1 5388 64.798 59.907 1 NaN NaN 0 3197700 0 3197700 14903 1108 5683 5815 23240 23240 HECQANGPEDLNR 13 0 1 Unmodified _HECQANGPEDLNR_ 0 0 0 B7Z9M9;V9HWA6;P60981 B7Z9M9 B7Z9M9 HEL32;DSTN Destrin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.3356 2 770.333878 1538.6532 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.748 1 18.748 18.248 19.248 0 0 0 0 0.015825 1 5366 50.353 29.483 1 14904 1108 5683 5815 23241 23241 HECQANGPEDLNR 13 0 1 Unmodified _HECQANGPEDLNR_ 0 0 0 B7Z9M9;V9HWA6;P60981 B7Z9M9 B7Z9M9 HEL32;DSTN Destrin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 770.8377 2 770.333878 1538.6532 68515.47 0.23788 0.00018325 1.3248 0.0010205 1.5627 0.0012038 770.335158161021 775.338932572636 20.021 0.3154 20.021 19.837 20.152 1.9073E-06 59 12 8 0 0 0 0.063093 1 5055 26.412 26.412 1 2.8832 2.5925 0 2254700 540190 1714500 14905 1108 5683 5815 23242 23242 HECQNLESEPIR 12 0 1 Unmodified _HECQNLESEPIR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.3528 2 756.348997 1510.68344 NaN NaN NaN 0.78919 0.0005969 NaN NaN NaN NaN 28.328 0.14727 28.328 28.213 28.36 1.9073E-06 0 0 0 1.6863E-05 1 13319 101.93 88.575 1 NaN NaN 0 3539800 0 3539800 14906 1581 5684 5816 23243 23243 HEEEFDLFMR 10 0 1 Oxidation (M) _HEEEFDLFM(ox)R_ HEEEFDLFM(1)R HEEEFDLFM(91.09)R 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8027 2 684.798077 1367.5816 74986.23 0.38971 0.00026687 0.10435 7.1462E-05 0.49407 0.00033834 684.798330880153 689.802230538123 77.216 0.73019 77.216 76.877 77.607 0 215 62 5 0 0 0 0.00014106 2 45626 91.087 87.165 1 1.0012 1.0369 0 13762000 6495800 7265900 14907 695 5685 5817 23244;23245 23245 535 HEEEFDLFMR 10 0 1 Oxidation (M) _HEEEFDLFM(ox)R_ HEEEFDLFM(1)R HEEEFDLFM(113.71)R 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8029 2 684.798077 1367.5816 74812.11 0.51638 0.00035362 0.19143 0.00013109 0.70781 0.00048471 684.798712917321 689.802397079535 75.457 0.59689 75.457 75.153 75.75 0 203 53 6 0 0 0 2.9338E-08 1 45463 113.71 108.92 1 1.0625 1.0646 0 18382000 9142500 9239000 14908 695 5685 5817 23246 23246 535 HEGVFICR 8 0 1 Unmodified _HEGVFICR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.2503 2 509.250369 1016.48618 84408.66 0.32539 0.0001657 0.25966 0.00013223 0.58505 0.00029794 509.250506437474 514.254504041346 32.812 0.86537 32.812 32.42 33.286 0 304 82 5 0 0 0 1.0833E-08 2 16281 152.31 132.95 1 0.60523 0.64273 0 42376000 24105000 18271000 14909 1506 5686 5818 23247;23248 23248 HEGVFICR 8 0 1 Unmodified _HEGVFICR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2516 2 509.250369 1016.48618 84736.77 0.33013 0.00016812 -0.031379 -1.598E-05 0.29875 0.00015214 509.250385588233 514.25439261901 31.087 0.92012 31.087 30.816 31.736 0 227 81 6 0 0 0 1.5871E-09 2 15234 161.6 144.31 1 0.68915 0.78483 0 107370000 59967000 47402000 14910 1506 5686 5818 23249;23250 23250 HEGVFICR 8 0 1 Unmodified _HEGVFICR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.2548 2 509.250369 1016.48618 84375.27 0.24479 0.00012466 0.29356 0.00014949 0.53834 0.00027415 509.250482199647 514.254637838706 35.599 1.2734 35.599 35.319 36.593 0 503 108 7 0 0 0 0.012794 2 15772 66.799 59.569 1 0.88734 0.7314 0 18448000 9123600 9324600 14911 1506 5686 5818 23251;23252 23252 HEGVFICR 8 0 1 Unmodified _HEGVFICR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.2545 2 509.250369 1016.48618 84590.63 0.49534 0.00025225 -0.021181 -1.0786E-05 0.47416 0.00024146 509.250245208146 514.254532340373 35.324 1.6769 35.324 34.82 36.497 0 539 147 6 0 0 0 0.028279 2 15098 53.351 49.035 1 0.88869 0.72192 0 12206000 6731900 5474600 14912 1506 5686 5818 23253;23254 23253 HEIGEFPVFFFGSK 14 1 0 Unmodified _HEIGEFPVFFFGSK_ 0 0 0 O96028;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.9169 2 820.909016 1639.80348 NaN NaN NaN 0.0064647 5.3069E-06 NaN NaN NaN NaN 120.06 0.78649 120.06 119.61 120.4 -7.6294E-06 0 0 0 9.6338E-05 1 77341 89.403 72.732 1 NaN NaN 0 3861200 0 3861200 14913 1435 5687 5819 23255 23255 HEIGEFPVFFFGSK 14 1 0 Unmodified _HEIGEFPVFFFGSK_ 0 0 0 O96028;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.9168 2 820.909016 1639.80348 69728.41 0.823 0.0006756 0.091212 7.4877E-05 0.91421 0.00075048 820.908950753539 824.916461794914 118.95 0.81487 118.95 118.47 119.29 0 210 52 6 0 0 0 1.1855E-05 1 78264 98.902 92.93 1 0.89114 0.89935 0 8040400 3926200 4114200 14914 1435 5687 5819 23256 23256 HEIGEFPVFFFGSK 14 1 0 Unmodified _HEIGEFPVFFFGSK_ 0 0 0 O96028;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.6086 3 547.608436 1639.80348 NaN NaN NaN -0.2326 -0.00012738 NaN NaN NaN NaN 118.87 0.69339 118.87 118.52 119.22 0 0 0 0 0.00043788 1 78281 54.898 43.793 1 NaN NaN 0 3768200 3768200 0 14915 1435 5687 5819 23257 23257 HEIGEFPVFFFGSK 14 1 0 Unmodified _HEIGEFPVFFFGSK_ 0 0 0 O96028;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 825.4179 2 820.909016 1639.80348 67439.48 0.8382 0.00068808 0.32545 0.00026716 1.1636 0.00095524 821.411908066609 824.915870860351 129.87 0.9826 129.87 129.56 130.55 0 157 47 6 0 0 0 1.1855E-05 1 78574 98.902 98.902 1 1.511 1.197 0 4903200 1854100 3049100 14916 1435 5687 5819 23258 23258 HEIGEFPVFFFGSK 14 1 0 Unmodified _HEIGEFPVFFFGSK_ 0 0 0 O96028;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 825.4183 2 820.909016 1639.80348 66992.27 1.118 0.00091777 0.41451 0.00034027 1.5325 0.001258 821.411637013795 825.417411109424 129.6 0.77725 129.6 129.29 130.07 0 155 30 9 0 0 0 0.00082886 3 77412 58.04 54.508 1 1.6251 1.3298 0 5487000 2253700 3233300 14917 1435 5687 5819 23259;23260;23261 23259 HEILLSQSVR 10 0 1 Unmodified _HEILLSQSVR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.3361 2 591.335487 1180.65642 80178.55 0.79284 0.00046883 -0.28766 -0.00017011 0.50517 0.00029873 591.335359911261 596.339335846526 42.232 0.76672 42.232 41.966 42.733 -3.8147E-06 171 66 4 0 0 0 0.0010607 1 22885 76.827 76.827 1 2.168 2.3331 0 25752000 7559600 18192000 14918 1611 5688 5820 23262 23262 HELLLGAGSGPGAGQQQATPGALLQAGPPR 30 0 1 Unmodified _HELLLGAGSGPGAGQQQATPGALLQAGPPR_ 0 0 0 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 950.8383 3 950.505406 2848.49439 63592.63 0.69936 0.00066474 -0.12007 -0.00011413 0.57928 0.00055061 951.174050920789 954.175636910976 99.968 0.95526 99.968 99.523 100.48 0 452 83 9 0 0 0 2.5775E-11 4 61078 57.351 57.351 1 0.97005 1.038 0 45370000 20669000 24701000 14919 643 5689 5821 23263;23264;23265;23266 23264 HELLLGAGSGPGAGQQQATPGALLQAGPPR 30 0 1 Unmodified _HELLLGAGSGPGAGQQQATPGALLQAGPPR_ 0 0 0 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 953.8424 3 950.505406 2848.49439 63072.58 0.64249 0.00061069 -0.12504 -0.00011885 0.51745 0.00049184 950.839593591678 954.175595213493 98.816 0.76089 98.816 98.482 99.243 0 437 62 10 0 0 0 6.8777E-20 3 61726 81.055 81.055 1 0.96137 1.0709 0 43750000 20273000 23477000 14920 643 5689 5821 23267;23268;23269 23267 HELLLGAGSGPGAGQQQATPGALLQAGPPR 30 0 1 Unmodified _HELLLGAGSGPGAGQQQATPGALLQAGPPR_ 0 0 0 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 950.8398 3 950.505406 2848.49439 63142.88 0.73297 0.0006967 0.17312 0.00016455 0.90609 0.00086124 950.839336009549 954.175938305041 111.5 0.4826 111.5 111.3 111.78 -7.6294E-06 179 24 10 0 0 0 0.00014418 1 64597 32.98 32.98 1 1.0507 0.89708 0 8834500 3857700 4976800 14921 643 5689 5821 23270 23270 HELLLGAGSGPGAGQQQATPGALLQAGPPR 30 0 1 Unmodified _HELLLGAGSGPGAGQQQATPGALLQAGPPR_ 0 0 0 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 954.176 3 950.505406 2848.49439 62982.93 0.48959 0.00046535 0.24233 0.00023033 0.73191 0.00069569 950.839476013083 953.841747652277 111.3 0.44871 111.3 111.11 111.56 0 137 21 10 0 0 0 4.0078E-11 2 63520 54.675 54.675 1 0.86 0.69694 0 11875000 6132000 5742900 14922 643 5689 5821 23271;23272 23272 HELLQPFNVLYEK 13 1 0 Unmodified _HELLQPFNVLYEK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.4429 2 815.435398 1628.85624 NaN NaN NaN -0.42552 -0.00034698 NaN NaN NaN NaN 105.51 1.0916 105.51 104.94 106.04 0 0 0 0 0.00050027 1 65073 83.397 58.605 1 NaN NaN 0 7442700 0 7442700 14923 328 5690 5822 23273 23273 HELQANCYEEVK 12 1 0 Unmodified _HELQANCYEEVK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.3533 2 760.345923 1518.67729 69777.16 0.48228 0.0003667 -0.029462 -2.2401E-05 0.45281 0.00034429 760.346524831751 764.352975171101 30.838 0.57384 30.838 30.486 31.06 0 156 51 5 0 0 0 1.1665E-12 2 15027 147.71 111.37 1 5.1575 5.176 0 26880000 5365200 21515000 14924 1242 5691 5823 23274;23275 23275 HELQANCYEEVK 12 1 0 Unmodified _HELQANCYEEVK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.856 2 760.345923 1518.67729 NaN NaN NaN 0.04251 3.2322E-05 NaN NaN NaN NaN 29.648 0.44637 29.648 29.425 29.871 1.9073E-06 0 0 0 2.7378E-13 1 14227 124.42 94.679 1 NaN NaN 0 15823000 0 15823000 14925 1242 5691 5823 23276 23276 HELSTEYIPDPER 13 0 1 Unmodified _HELSTEYIPDPER_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.3832 2 793.378277 1584.742 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.268 1 61.268 60.768 61.768 0 0 0 0 9.4306E-24 1 35884 136.48 116.17 1 14926 1741 5692 5824 23277 23277 HELSTEYIPDPER 13 0 1 Unmodified _HELSTEYIPDPER_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.3823 2 793.378277 1584.742 71081.73 0.79855 0.00063355 -0.27246 -0.00021616 0.52609 0.00041739 793.879515400112 798.382063533934 61.461 0.58551 61.461 61.138 61.724 3.8147E-06 164 54 5 0 0 0 1.2681E-16 1 35935 135.99 135.99 1 0.86985 0.86794 0 11600000 5211300 6388800 14927 1741 5692 5824 23278 23278 HELSTEYIPDPER 13 0 1 Unmodified _HELSTEYIPDPER_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 798.3825 2 793.378277 1584.742 NaN NaN NaN 0.36735 0.00029145 NaN NaN NaN NaN 72.37 0.55381 72.37 72.176 72.73 0 0 0 0 0.0047052 1 37346 60.434 51.704 1 NaN NaN 0 2281500 0 2281500 14928 1741 5692 5824 23279 23279 HELTEISNVDVETQSGK 17 1 0 Unmodified _HELTEISNVDVETQSGK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.9807 3 629.309443 1884.9065 NaN NaN NaN -0.37944 -0.00023879 NaN NaN NaN NaN 57.918 0.80336 57.918 57.572 58.375 0 0 0 0 3.8595E-07 1 32707 81.594 71.537 1 NaN NaN 0 9138200 0 9138200 14929 1696 5693 5825 23280 23280 HELTEISNVDVETQSGK 17 1 0 Unmodified _HELTEISNVDVETQSGK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.6436 3 629.309443 1884.9065 NaN NaN NaN -0.36081 -0.00022706 NaN NaN NaN NaN 57.77 0.22961 57.77 57.623 57.853 0 0 0 0 0.0020217 1 32715 32.191 27.386 1 NaN NaN 0 4676800 4676800 0 14930 1696 5693 5825 23281 23281 HELTEISNVDVETQSGK 17 1 0 Unmodified _HELTEISNVDVETQSGK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 947.4689 2 943.460527 1884.9065 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.763 1 57.763 57.263 58.263 3.8147E-06 0 0 0 4.8493E-06 1 32686 94.09 64.154 1 14931 1696 5693 5825 23282 23282 HELTEISNVDVETQSGK 17 1 0 Unmodified _HELTEISNVDVETQSGK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.4686 2 943.460527 1884.9065 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.244 1 56.244 55.744 56.744 3.8147E-06 0 0 0 0.00038523 1 32333 69.716 37.11 1 14932 1696 5693 5825 23283 23283 HENITTAATEIIGAICK 17 1 0 Unmodified _HENITTAATEIIGAICK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.6523 3 614.652376 1840.9353 80217.39 0.70256 0.00043183 0.040499 2.4893E-05 0.74306 0.00045672 614.986898402863 617.657836297962 122.73 0.47001 122.73 122.53 123 0 79 22 5 0 0 0 0.053311 1 73289 13.627 13.627 1 1.5842 1.3358 0 1940600 976450 964100 14933 1412 5694 5826 23284 23284 HENITTAATEIIGAICK 17 1 0 Unmodified _HENITTAATEIIGAICK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.3245 3 614.652376 1840.9353 NaN NaN NaN -0.26227 -0.00016121 NaN NaN NaN NaN 122.51 0.53531 122.51 122.27 122.8 -7.6294E-06 0 0 0 0.020792 1 72175 29.274 19.525 1 NaN NaN 0 1370500 0 1370500 14934 1412 5694 5826 23285 23285 HEPGLGGPAER 11 0 1 Unmodified _HEPGLGGPAER_ 0 0 0 Q15554 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.2847 2 560.280712 1118.54687 82136.7 0.63231 0.00035427 -0.48781 -0.00027331 0.1445 8.0961E-05 560.279855557303 565.284651815027 20.499 0.28406 20.499 20.381 20.665 0 28 8 4 0 0 0 0.0017252 2 6801 65.305 52.949 1 1.4854 1.4779 0 7816300 3702500 4113800 14935 1762 5695 5827 23286;23287 23286 HEPIGYDR 8 0 1 Unmodified _HEPIGYDR_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.7377 2 493.738148 985.461744 NaN NaN NaN 0.39683 0.00019593 NaN NaN NaN NaN 20.333 0.30725 20.333 20.205 20.512 0 0 0 0 0.0098926 1 6790 77.741 59.01 1 NaN NaN 0 14723000 14723000 0 14936 1224 5696 5828 23288 23288 HEPIGYDR 8 0 1 Unmodified _HEPIGYDR_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.7381 2 493.738148 985.461744 86072.95 0.046633 2.3024E-05 0.014981 7.3967E-06 0.061614 3.0421E-05 493.738087348384 498.742214541744 20.005 0.30424 20.005 19.888 20.192 1.9073E-06 44 11 6 0 0 0 0.0018583 2 6344 105.12 92.079 1 0.71387 0.72469 0 20334000 11362000 8971200 14937 1224 5696 5828 23289;23290 23289 HEPLVLFCESCDTLTCR 17 0 1 Unmodified _HEPLVLFCESCDTLTCR_ 0 0 0 B2R8R5;Q13263;M0R3C0;M0R2I3 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.6592 3 712.988553 2135.94383 73185.01 0.78367 0.00055875 0.27413 0.00019545 1.0578 0.0007542 712.988156537766 716.99359940128 94.845 0.81548 94.845 94.486 95.301 0 203 70 6 0 0 0 2.0992E-05 1 57530 71.697 71.042 1 1.511 1.5717 0 22025000 12084000 9940800 14938 862 5697 5829 23291 23291 HEPLVLFCESCDTLTCR 17 0 1 Unmodified _HEPLVLFCESCDTLTCR_ 0 0 0 B2R8R5;Q13263;M0R3C0;M0R2I3 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.3231 3 712.988553 2135.94383 72604.57 0.77695 0.00055395 -0.3206 -0.00022859 0.45634 0.00032537 713.656769452212 716.65906567802 106.56 0.66274 106.56 106.32 106.99 -7.6294E-06 250 41 9 0 0 0 2.4205E-05 2 60924 62.765 62.498 1 1.0838 0.93049 0 8187300 4801400 3385900 14939 862 5697 5829 23292;23293 23293 HEPLVLFCESCDTLTCR 17 0 1 Unmodified _HEPLVLFCESCDTLTCR_ 0 0 0 B2R8R5;Q13263;M0R3C0;M0R2I3 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 716.9943 3 712.988553 2135.94383 72438.54 0.68132 0.00048577 -0.27055 -0.0001929 0.41076 0.00029287 713.322484849879 716.658738306491 106.33 0.623 106.33 106.07 106.69 0 224 38 8 0 0 0 0.00021009 2 59811 46.159 46.159 1 1.0185 0.84507 0 5711200 2902900 2808200 14940 862 5697 5829 23294;23295 23294 HEQILVLDPPTDLK 14 1 0 Unmodified _HEQILVLDPPTDLK_ 0 0 0 A8KA83;Q9P0L0;J3QKM9 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.9671 3 539.966401 1616.87737 85018.23 0.73433 0.00039651 -0.6322 -0.00034136 0.10213 5.5148E-05 539.966131953966 542.637396727732 95.072 0.70242 95.072 94.86 95.563 7.6294E-06 114 53 4 0 0 0 0.00020707 2 57705 44.312 39.843 1 1.1373 1.1638 0 14351000 6306800 8044700 14941 791 5698 5830 23296;23297 23296 HEQILVLDPPTDLK 14 1 0 Unmodified _HEQILVLDPPTDLK_ 0 0 0 A8KA83;Q9P0L0;J3QKM9 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.6384 3 539.966401 1616.87737 84549.52 0.71272 0.00038485 -0.15592 -8.419E-05 0.5568 0.00030066 539.966331183258 542.637766508583 107.27 0.58955 107.27 106.96 107.55 0 134 36 6 0 0 0 0.055154 2 61468 16.494 11.215 1 1.4185 1.1247 0 4334700 2433900 1900800 14942 791 5698 5830 23298;23299 23298 HEQILVLDPPTDLK 14 1 0 Unmodified _HEQILVLDPPTDLK_ 0 0 0 A8KA83;Q9P0L0;J3QKM9 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.4454 2 809.445963 1616.87737 68849.13 0.71203 0.00057635 0.29473 0.00023857 1.0068 0.00081492 809.446443981151 813.452779811402 107.22 0.60106 107.22 106.95 107.55 7.6294E-06 117 37 6 0 0 0 0.040068 1 61470 28.283 28.283 1 1.3526 1.0646 0 4010700 1761600 2249100 14943 791 5698 5830 23300 23300 HEQILVLDPPTDLK 14 1 0 Unmodified _HEQILVLDPPTDLK_ 0 0 0 A8KA83;Q9P0L0;J3QKM9 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.6379 3 539.966401 1616.87737 84062.88 0.6085 0.00032857 0.079664 4.3016E-05 0.68816 0.00037159 539.966393767997 542.637919281297 106.96 0.5451 106.96 106.67 107.22 0 136 32 6 0 0 0 0.046836 1 60241 18.179 12.795 1 1.6063 1.2929 0 2509500 1120000 1389500 14944 791 5698 5830 23301 23301 HESAEIFVVCQGFLAPDK 18 1 0 Unmodified _HESAEIFVVCQGFLAPDK_ 0 0 0 Q8IY81 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.0093 3 683.003297 2045.98806 NaN NaN NaN -0.18657 -0.00012743 NaN NaN NaN NaN 117.38 0.49149 117.38 117.18 117.67 7.6294E-06 0 0 0 0.00014407 1 69124 59.512 50.911 1 NaN NaN 0 3127900 0 3127900 14945 1898 5699 5831 23302 23302 HESAEIFVVCQGFLAPDK 18 1 0 Unmodified _HESAEIFVVCQGFLAPDK_ 0 0 0 Q8IY81 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.0099 3 683.003297 2045.98806 74294.68 0.62924 0.00042977 -0.30065 -0.00020535 0.32859 0.00022442 683.337655404737 686.008969045094 117.12 0.48195 117.12 116.91 117.4 7.6294E-06 120 21 8 0 0 0 0.00014248 1 68055 44.816 44.816 1 1.241 1.0176 0 5074800 2408900 2665900 14946 1898 5699 5831 23303 23303 HEVGALVR 8 0 1 Unmodified _HEVGALVR_ 0 0 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.7578 2 440.753601 879.49265 89266.35 0.28217 0.00012437 -0.79398 -0.00034995 -0.5118 -0.00022558 440.752882183617 445.757787193904 24.246 0.4033 24.246 24.104 24.508 0 52 16 4 0 0 0 0.0075857 1 10001 82.305 25.795 1 0.85621 0.88823 0 37731000 20400000 17332000 14947 1286 5700 5832 23304 23304 HEVGALVR 8 0 1 Unmodified _HEVGALVR_ 0 0 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 445.7575 2 440.753601 879.49265 90320.43 -0.21401 -9.4325E-05 0.28249 0.00012451 0.06848 3.0183E-05 440.753758532229 445.757742641974 25.79 0.5093 25.79 25.604 26.114 -1.9073E-06 63 20 5 0 0 0 0.027969 1 9565 53.554 8.9434 1 1.2005 1.0424 0 2333000 1136000 1197000 14948 1286 5700 5832 23305 23305 HEYVLAVR 8 0 1 Unmodified _HEYVLAVR_ 0 0 0 A4LAA3;P46100;B4DHH8;H0Y3T0;Q5JX93 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.7785 2 493.774534 985.534515 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.889 1 45.889 45.389 46.389 0 0 0 0 0.029163 1 21485 63.306 43.946 1 14949 672 5701 5833 23306 23306 HFADGLETDGTLQK 14 1 0 Unmodified _HFADGLETDGTLQK_ 0 0 0 Q4G1A1;A8K3X3;Q9H410;Q5JW53;Q5JW54;Q5JW57 Q4G1A1 Q4G1A1 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.3799 2 766.372995 1530.73144 72771.57 0.46486 0.00035625 0.2979 0.0002283 0.76276 0.00058456 766.374395169069 770.379952252828 52.591 0.31392 52.591 52.436 52.75 0 68 22 5 0 0 0 0.00019995 2 29232 69.346 61.696 1 0.90535 0.91636 0 10163000 4984000 5178600 14950 727 5702 5834 23307;23308 23307 HFCGGTLISPK 11 1 0 Unmodified _HFCGGTLISPK_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.8104 2 608.81079 1215.60703 NaN NaN NaN 0.32371 0.00019708 NaN NaN NaN NaN 50.292 1.3011 50.292 49.965 51.266 0 0 0 0 0.0011115 1 24595 85.676 70.415 1 NaN NaN 0 4199800 4199800 0 + 14951 1157 5703 5835 23309 23309 HFCPNVPIILVGNK 14 1 0 Unmodified _HFCPNVPIILVGNK_ 0 0 0 B4DKN9;Q5JR08;A0A024R324;A0A024R0I3;P61586;P08134;Q5JR07;C9JNR4;E9PQH6;C9JX21;Q5JR05;Q9BVT0 B4DKN9 B4DKN9 RHOC;RHOA;hCG_2043376;ARHA Transforming protein RhoA;Rho-related GTP-binding protein RhoC MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.4478 2 804.43996 1606.86537 69138.69 0.66553 0.00053538 0.1533 0.00012332 0.81883 0.0006587 804.94161138601 808.447380169022 99.145 0.81539 99.145 98.781 99.597 -7.6294E-06 258 69 6 0 0 0 1.8678E-21 1 62104 163.38 163.38 1 1.7435 1.7641 0 28967000 11683000 17283000 14952 48 5704 5836 23310 23310 HFCPNVPIILVGNK 14 1 0 Unmodified _HFCPNVPIILVGNK_ 0 0 0 B4DKN9;Q5JR08;A0A024R324;A0A024R0I3;P61586;P08134;Q5JR07;C9JNR4;E9PQH6;C9JX21;Q5JR05;Q9BVT0 B4DKN9 B4DKN9 RHOC;RHOA;hCG_2043376;ARHA Transforming protein RhoA;Rho-related GTP-binding protein RhoC MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.4392 2 804.43996 1606.86537 69192.84 0.84916 0.0006831 0.27553 0.00022165 1.1247 0.00090475 804.439827785806 808.948623371634 111.7 0.46113 111.7 111.54 112 7.6294E-06 74 27 5 0 0 0 0.0017758 1 64767 51.276 51.276 1 1.4636 1.1849 0 2749600 960690 1788900 14953 48 5704 5836 23311 23311 HFDGEDYTCITFQPDLSK 18 1 0 Unmodified _HFDGEDYTCITFQPDLSK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.3499 3 724.989605 2171.94698 72626.63 0.78233 0.00056718 0.29039 0.00021053 1.0727 0.00077771 725.658382615387 727.995210248189 95.607 0.60256 95.607 95.321 95.924 0 141 48 6 0 0 0 0.0056506 1 58074 25.158 25.158 1 0.52899 0.5474 0 12709000 6953900 5754900 14954 1679 5705 5837 23312 23312 HFDGEDYTCITFQPDLSK 18 1 0 Unmodified _HFDGEDYTCITFQPDLSK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.9918 3 724.989605 2171.94698 75639.7 0.80206 0.00058148 0.015546 1.127E-05 0.8176 0.00059275 725.323835662827 727.995223222813 94.487 0.62543 94.487 94.221 94.846 0 148 52 5 0 0 0 0.00028784 1 58620 25.995 25.995 1 0.51501 0.52508 0 12162000 7023700 5138300 14955 1679 5705 5837 23313 23313 HFDGEDYTCITFQPDLSK 18 1 0 Unmodified _HFDGEDYTCITFQPDLSK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.9952 3 724.989605 2171.94698 71989.1 0.84681 0.00061393 -0.1054 -7.6416E-05 0.74141 0.00053751 725.323777787058 727.995521435308 107.78 0.74228 107.78 107.56 108.31 0 220 39 8 0 0 0 8.4231E-06 2 61801 53.278 53.278 1 1.0515 0.84441 0 7750000 3914100 3835900 14956 1679 5705 5837 23314;23315 23314 HFDGEDYTCITFQPDLSK 18 1 0 Unmodified _HFDGEDYTCITFQPDLSK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.9966 3 724.989605 2171.94698 71795.48 0.69047 0.00050058 -0.047134 -3.4172E-05 0.64333 0.00046641 725.323905388203 727.995486460727 107.75 0.65207 107.75 107.5 108.16 -7.6294E-06 193 34 10 0 0 0 5.1177E-06 2 60908 54.764 54.764 1 1.0558 0.86584 0 5089600 2271500 2818100 14957 1679 5705 5837 23316;23317 23317 HFDLNLR 7 0 1 Unmodified _HFDLNLR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.7504 2 457.745776 913.477 88685.55 0.050338 2.3042E-05 0.16632 7.613E-05 0.21665 9.9172E-05 457.745630103158 462.750070779394 55.868 0.86865 55.868 55.523 56.391 0 213 68 5 0 0 0 0.037563 1 32150 60.788 20.685 1 0.87197 0.90806 0 22250000 12369000 9881000 14958 809 5706 5838 23318 23318 HFEELETIMDR 11 0 1 Oxidation (M) _HFEELETIM(ox)DR_ HFEELETIM(1)DR HFEELETIM(53.68)DR 0 1 0 Q58EY4;Q92922;B4DYQ1;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.8372 2 718.329741 1434.64493 NaN NaN NaN -0.057015 -4.0956E-05 NaN NaN NaN NaN 56.245 0.38757 56.245 56.08 56.468 0 0 0 0 0.0056549 1 32318 53.683 33.896 1 NaN NaN 0 5892600 0 5892600 14959 1798;321 5707 5839 23319 23319 244 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.7216 2 451.721967 901.429381 89394.27 0.23709 0.0001071 0.3121 0.00014098 0.54918 0.00024808 451.722422797025 455.728910328747 25.943 1.8507 25.943 25.743 27.594 -1.9073E-06 478 108 11 0 0 0 5.9849E-14 3 11406 167.24 94.203 1 0.70238 0.84953 0 1750500000 1035900000 714570000 14960 830 5708 5840 23320;23321;23322 23321 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.722 2 451.721967 901.429381 90727.52 0.10854 4.903E-05 -0.36854 -0.00016648 -0.26 -0.00011745 451.72237852224 455.72845304872 25.221 0.82439 25.221 25.012 25.836 0 215 40 9 0 0 0 7.3583E-21 2 10765 178.99 97.609 1 0.6907 0.81765 0 2315900000 1317900000 998000000 14961 830 5708 5840 23323;23324 23323 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.7227 2 451.721967 901.429381 91113.72 0.25039 0.0001131 0.36651 0.00016556 0.61689 0.00027866 451.722027698573 455.729008758577 25.946 1.4283 25.946 25.824 27.252 -1.9073E-06 231 75 6 0 0 0 0.0003384 2 11421 133.68 59.164 1 0.68738 0.72059 0 34672000 17925000 16747000 14962 830 5708 5840 23325;23326 23325 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 451.7219 2 451.721967 901.429381 NaN NaN NaN 0.34644 0.0001565 NaN NaN NaN NaN 28.071 3.5908 28.071 27.81 31.401 0 0 0 0 3.5595E-05 3 11059 124.98 60.18 1 NaN NaN 0 98767000 98767000 0 14963 830 5708 5840 23327;23328;23329 23327 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 455.7287 2 451.721967 901.429381 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.766 1 28.766 28.266 29.266 -1.9073E-06 0 0 0 0.0039938 1 11608 93.162 44.402 1 14964 830 5708 5840 23330 23330 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 451.7216 2 451.721967 901.429381 89068.71 -0.27702 -0.00012514 -0.5619 -0.00025382 -0.83892 -0.00037896 451.72234274423 455.728447714967 27.872 1.19 27.872 27.392 28.582 0 331 54 8 0 0 0 0.00095784 2 10352 123.72 58.944 1 1.1943 1.0277 0 167790000 75866000 91919000 14965 830 5708 5840 23331;23332 23332 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 455.729 2 451.721967 901.429381 NaN NaN NaN 0.28386 0.00012823 NaN NaN NaN NaN 28.874 4.0281 28.874 28.568 32.596 0 0 0 0 0.012709 2 11071 73.208 20.524 1 NaN NaN 0 4300500 0 4300500 14966 830 5708 5840 23333;23334 23333 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 451.7227 2 451.721967 901.429381 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.591 1 28.591 28.091 29.091 0 0 0 0 0.034815 1 10948 60.589 24.956 1 14967 830 5708 5840 23335 23335 HFELGGDKK 9 2 0 Unmodified _HFELGGDKK_ 0 0 1 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 349.5246 3 344.182058 1029.52434 101790.7 0.077817 2.6783E-05 0.19127 6.5832E-05 0.26909 9.2615E-05 344.182032229181 349.524752611588 21.431 0.79771 21.431 21.114 21.912 0 184 42 6 0 0 0 0.0049713 2 7587 50.805 43.325 1 0.70848 0.83646 0 47067000 25927000 21140000 14968 830 5709 5841 23336;23337 23336 HFELGGDKK 9 2 0 Unmodified _HFELGGDKK_ 0 0 1 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.1821 3 344.182058 1029.52434 102275.7 -0.18771 -6.4608E-05 0.31588 0.00010872 0.12817 4.4114E-05 344.182057851767 349.524956335542 19.454 0.6441 19.454 19.31 19.954 0 153 28 9 0 0 0 0.013059 1 5885 37.191 29.009 1 0.70078 0.81288 0 79621000 40710000 38911000 14969 830 5709 5841 23338 23338 HFELGGDKK 9 2 0 Unmodified _HFELGGDKK_ 0 0 1 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.7839 2 515.769448 1029.52434 83264.22 0.20298 0.00010469 1.051 0.00054208 1.254 0.00064676 515.769761400353 523.784386008987 19.454 0.57656 19.454 19.336 19.913 0 85 25 5 0 0 0 3.7242E-05 2 5904 128.69 119.1 1 0.68425 0.79174 0 42796000 23865000 18931000 14970 830 5709 5841 23339;23340 23339 HFELGGDKK 9 2 0 Unmodified _HFELGGDKK_ 0 0 1 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 349.5249 3 344.182058 1029.52434 101746.3 -0.47042 -0.00016191 0.46091 0.00015864 -0.0095143 -3.2747E-06 344.18213141438 349.524958763224 21.08 0.49629 21.08 20.886 21.383 1.9073E-06 127 33 6 0 0 0 0.034532 1 6235 25.621 25.621 1 1.3141 1.1356 0 4393000 1776100 2616900 14971 830 5709 5841 23341 23341 HFIAEYDTSTQDFGEPF 17 0 0 Unmodified _HFIAEYDTSTQDFGEPF_ 0 0 0 F8W0Q9 F8W0Q9 F8W0Q9 PPHLN1 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1002.939 2 1002.43652 2002.85849 NaN NaN NaN -0.024674 -2.4734E-05 NaN NaN NaN NaN 121.33 0.5724 121.33 121.08 121.66 -7.6294E-06 0 0 0 0.049239 1 72159 32.062 18.635 1 14972 1264 5710 5842 23342 23342 HFLPASR 7 0 1 Unmodified _HFLPASR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 419.2337 2 414.229762 826.444972 94167.02 -0.20958 -8.6815E-05 0.30237 0.00012525 0.092787 3.8435E-05 414.229749040099 419.233981119416 27.583 1.1427 27.583 27.342 28.485 0 128 51 6 0 0 0 0.056031 1 10802 52.299 31.817 1 1.4789 1.2495 0 4846400 1867100 2979300 14973 1745 5711 5843 23343 23343 HFNAPSHIR 9 0 1 Unmodified _HFNAPSHIR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;J3KSS0 Q6IBH6 Q6IBH6 RPL26;hCG_26523 60S ribosomal protein L26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 360.19 3 360.189547 1077.54681 98107.5 0.11292 4.0672E-05 -0.44308 -0.00015959 -0.33016 -0.00011892 360.18953284667 363.525074505112 23.161 0.38097 23.161 23.014 23.395 0 62 18 5 0 0 0 5.3549E-06 2 9061 105.52 84.073 1 0.67074 0.69501 0 20508000 12045000 8463200 14974 1629 5712 5844 23344;23345 23344 HFNAPSHVR 9 0 1 Unmodified _HFNAPSHVR_ 0 0 0 E5RIT6;Q9UNX3;E5RHH1 E5RIT6 E5RIT6 RPL26L1 60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 355.5175 3 355.517663 1063.53116 104713.3 0.14243 5.0635E-05 -0.52526 -0.00018674 -0.38284 -0.00013611 355.517672633535 358.853374154031 17.827 0.17849 17.827 17.709 17.888 0 17 6 4 0 0 0 0.0044925 1 4715 47.187 37.973 1 0.72441 0.78645 0 2513700 1532200 981550 14975 1214 5713 5845 23346 23346 HFNSMSGPATLR 12 0 1 Oxidation (M) _HFNSM(ox)SGPATLR_ HFNSM(1)SGPATLR HFNSM(53.33)SGPATLR 0 1 0 Q9Y305;Q9H2R8 Q9Y305 Q9Y305 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3229 2 667.319511 1332.62447 NaN NaN NaN -1.7876 -0.0011929 NaN NaN NaN NaN 26.689 0.22245 26.689 26.555 26.777 1.9073E-06 0 0 0 0.0044508 1 12052 53.327 23.854 1 NaN NaN 0 7508200 0 7508200 14976 2130 5714 5846 23347 23347 1964 HFNSMSGPATLR 12 0 1 Oxidation (M) _HFNSM(ox)SGPATLR_ HFNSM(1)SGPATLR HFNSM(60.52)SGPATLR 0 1 0 Q9Y305;Q9H2R8 Q9Y305 Q9Y305 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3233 2 667.319511 1332.62447 NaN NaN NaN 0.82038 0.00054745 NaN NaN NaN NaN 25.797 0.22603 25.797 25.69 25.916 1.9073E-06 0 0 0 0.0019735 2 11313 60.518 33.404 1 NaN NaN 0 8330400 0 8330400 14977 2130 5714 5846 23348;23349 23348 1964 HFSALR 6 0 1 Unmodified _HFSALR_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;A0A0A0MS76;A8MXY4;A6NN14 A8K3S3 A8K3S3 KIF2C;ZNF99;ZNF729 Kinesin-like protein;Kinesin-like protein KIF2C;Zinc finger protein 99;Zinc finger protein 729 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.7034 2 365.70338 729.392208 97017.52 0.0022529 8.2391E-07 0.60075 0.0002197 0.603 0.00022052 365.703425599946 370.707508487505 22.911 0.82314 22.911 22.733 23.556 0 118 41 6 0 0 0 0.0030292 1 8861 145 27.464 1 0.82163 0.90921 0 60649000 33302000 27347000 14978 626 5715 5847 23350 23350 HFSTEDGIFQGQR 13 0 1 Unmodified _HFSTEDGIFQGQR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.2437 3 507.907545 1520.7008 86031.1 0.17303 8.7886E-05 -0.15972 -8.1122E-05 0.013316 6.7633E-06 507.907490792602 511.243492041619 52.744 0.4313 52.744 52.545 52.976 -3.8147E-06 131 31 6 0 0 0 0.00011948 2 29334 51.774 31.668 1 0.92003 0.94288 0 14432000 7980500 6451800 14979 1859 5716 5848 23351;23352 23351 HFSTEDGIFQGQR 13 0 1 Unmodified _HFSTEDGIFQGQR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.3592 2 761.357679 1520.7008 70006.77 0.65361 0.00049763 0.16992 0.00012937 0.82353 0.000627 761.357690238501 766.361821378506 50.382 0.18975 50.382 50.289 50.479 0 74 17 6 0 0 0 2.614E-19 2 28436 148.32 139 1 0.98777 1.0659 0 26352000 11487000 14865000 14980 1859 5716 5848 23353;23354 23354 HFSTEDGIFQGQR 13 0 1 Unmodified _HFSTEDGIFQGQR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.9082 3 507.907545 1520.7008 87142.77 0.42742 0.00021709 -0.15898 -8.0748E-05 0.26844 0.00013634 507.907643841904 511.243116949931 50.394 0.28479 50.394 50.26 50.545 0 102 26 6 0 0 0 4.1679E-05 1 28444 56.02 42.304 1 0.95136 1.0402 0 35292000 18928000 16364000 14981 1859 5716 5848 23355 23355 HFSVEGQLEFR 11 0 1 Unmodified _HFSVEGQLEFR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;Q58FG1;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q14568 B4DMA2;K9JA46 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AA4P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.8407 2 674.835851 1347.65715 74415.38 0.70514 0.00047586 0.056946 3.8429E-05 0.76209 0.00051429 674.835460591934 679.839981289878 75.638 1.1696 75.638 75.23 76.4 0 365 97 6 0 0 0 0.00059163 3 44921 73.985 41.144 1 2.3049 2.3924 0 37814000 10372000 27442000 14982 379;1348 5717 5849 23356;23357;23358 23358 HFSVEGQLEFR 11 0 1 Unmodified _HFSVEGQLEFR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;Q58FG1;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q14568 B4DMA2;K9JA46 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AA4P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.5624 3 450.226326 1347.65715 93914.84 0.22663 0.00010203 0.24185 0.00010889 0.46848 0.00021092 450.226617179037 453.562409692977 75.685 0.61858 75.685 75.368 75.986 7.6294E-06 104 53 4 0 0 0 4.0598E-06 1 44460 90.05 65.196 1 2.3096 2.3492 0 9874200 3702600 6171500 14983 379;1348 5717 5849 23359 23359 HFSVEGQLEFR 11 0 1 Unmodified _HFSVEGQLEFR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;Q58FG1;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q14568 B4DMA2;K9JA46 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AA4P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.8398 2 674.835851 1347.65715 71935.48 0.51509 0.0003476 0.22686 0.00015309 0.74195 0.00050069 674.835535231804 679.839618483194 73.462 1.6336 73.462 72.889 74.523 0 429 137 7 0 0 0 2.8749E-12 4 44022 137.95 96.966 1 2.3813 2.7214 0 50416000 15273000 35143000 14984 379;1348 5717 5849 23360;23361;23362;23363 23361 HFSVEGQLEFR 11 0 1 Unmodified _HFSVEGQLEFR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;Q58FG1;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q14568 B4DMA2;K9JA46 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AA4P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.5626 3 450.226326 1347.65715 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.198 1 73.198 72.698 73.698 0 0 0 0 0.025113 1 43947 60.641 44.388 1 14985 379;1348 5717 5849 23364 23364 HFSVEGQLEFR 11 0 1 Unmodified _HFSVEGQLEFR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;Q58FG1;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q14568 B4DMA2;K9JA46 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AA4P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.8401 2 674.835851 1347.65715 73549.68 0.54436 0.00036735 -0.45429 -0.00030657 0.090066 6.0779E-05 674.835713799295 679.839749255926 84.593 1.8218 84.593 84.329 86.151 0 411 123 8 0 0 0 2.2587E-08 2 46074 121.83 75.404 1 1.4466 1.1794 0 15263000 5566100 9697100 14986 379;1348 5717 5849 23365;23366 23365 HFSVEGQLEFR 11 0 1 Unmodified _HFSVEGQLEFR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;Q58FG1;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q14568 B4DMA2;K9JA46 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AA4P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 453.5624 3 450.226326 1347.65715 92211.48 0.09741 4.3856E-05 0.37583 0.00016921 0.47324 0.00021306 450.226415882568 453.562473865205 84.563 0.64494 84.563 84.368 85.013 0 114 47 5 0 0 0 0.000527 1 46130 48.701 43.041 1 1.5229 1.3191 0 2553200 1055800 1497300 14987 379;1348 5717 5849 23367 23367 HFSVEGQLEFR 11 0 1 Unmodified _HFSVEGQLEFR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;Q58FG1;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q14568 B4DMA2;K9JA46 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AA4P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.8359 2 674.835851 1347.65715 74103.75 0.72427 0.00048877 -0.18701 -0.0001262 0.53726 0.00036256 674.835667845294 679.839637827763 84.465 1.1704 84.465 84.163 85.333 0 380 82 8 0 0 0 0.0055485 2 45207 56.013 23.173 1 1.4616 1.1879 0 12272000 4750300 7522000 14988 379;1348 5717 5849 23368;23369 23369 HFSVEGQLEFR 11 0 1 Unmodified _HFSVEGQLEFR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;Q58FG1;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q14568 B4DMA2;K9JA46 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AA4P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 453.8971 3 450.226326 1347.65715 90226.23 0.1983 8.9282E-05 0.40908 0.00018418 0.60739 0.00027346 450.226297543806 453.562482923134 84.483 0.41068 84.483 84.24 84.651 0 85 28 5 0 0 0 0.0071743 1 45287 29.303 20.349 1 1.2959 1.1367 0 2521800 1137200 1384600 14989 379;1348 5717 5849 23370 23370 HFTEDIQTR 9 0 1 Unmodified _HFTEDIQTR_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9;H7C2I2;H7C521;H7C5L6;A8MPP7;A8MPY5;E7ETV6;Q59GF4;Q9UPE1;A0A024R704;P78362 Q96SB4;A0A024R704 Q96SB4 SRPK1;SRPK3;SRPK2 SRSF protein kinase 1;SRSF protein kinase 3;SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.7849 2 573.780544 1145.54654 81993.39 0.39632 0.0002274 0.066752 3.8301E-05 0.46307 0.0002657 573.780467217468 578.78462872317 26.692 0.45987 26.692 26.555 27.014 -1.9073E-06 102 29 5 0 0 0 0.001702 1 12034 81.972 70.203 1 1.9154 2.0574 0 46912000 12870000 34042000 14990 1988;212 5718 5850 23371 23371 HFTEDIQTR 9 0 1 Unmodified _HFTEDIQTR_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9;H7C2I2;H7C521;H7C5L6;A8MPP7;A8MPY5;E7ETV6;Q59GF4;Q9UPE1;A0A024R704;P78362 Q96SB4;A0A024R704 Q96SB4 SRPK1;SRPK3;SRPK2 SRSF protein kinase 1;SRSF protein kinase 3;SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.7852 2 573.780544 1145.54654 78891.49 0.078602 4.51E-05 1.6406 0.00094133 1.7192 0.00098643 573.780569374131 578.784668377726 29.787 0.639 29.787 29.515 30.154 0 184 40 7 0 0 0 0.044207 1 11682 40.352 32.784 1 1.1126 1.0078 0 2176800 1134100 1042700 14991 1988;212 5718 5850 23372 23372 HFTIDDFEIGR 11 0 1 Unmodified _HFTIDDFEIGR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRF8;J3KRJ2 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.3317 2 675.327859 1348.64116 NaN NaN NaN -0.62596 -0.00042272 NaN NaN NaN NaN 91.881 0.55934 91.881 91.593 92.153 -7.6294E-06 0 0 0 0.0068776 1 56865 63.076 54.543 1 NaN NaN 0 4163800 0 4163800 14992 881;1967 5719 5851 23373 23373 HFTIDDFEIGRPLGK 15 1 1 Unmodified _HFTIDDFEIGRPLGK_ 0 0 1 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRF8;J3KRJ2 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.3135 3 582.305416 1743.89442 78802.47 0.64093 0.00037322 0.31281 0.00018215 0.95374 0.00055537 582.305577961654 588.313096753421 106.74 1.4995 106.74 106.41 107.91 0 393 90 8 0 0 0 0.00010232 3 60945 66.215 66.215 1 2.2618 1.9778 0 25396000 7724900 17671000 14993 881;1967 5720 5852 23374;23375;23376 23374 HFTIDDFEIGRPLGK 15 1 1 Unmodified _HFTIDDFEIGRPLGK_ 0 0 1 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRF8;J3KRJ2 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.6478 3 582.305416 1743.89442 79589.15 0.55446 0.00032287 0.30999 0.00018051 0.86445 0.00050338 582.305714228716 588.313031485949 106.38 1.1659 106.38 106.02 107.18 0 364 70 7 0 0 0 0.0001278 2 59774 60.937 56.877 1 2.1229 1.8039 0 27384000 8848500 18535000 14994 881;1967 5720 5852 23377;23378 23377 HFVLDECDK 9 1 0 Unmodified _HFVLDECDK_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.7709 2 581.763506 1161.51246 79876.52 0.91379 0.00053161 -0.29071 -0.00016913 0.62307 0.00036248 581.7635036156 585.770500855146 38.161 0.60526 38.161 37.826 38.431 3.8147E-06 195 50 6 0 0 0 0.00016983 2 19491 107.57 94.538 1 1.2125 1.1963 0 25015000 10793000 14222000 14995 1359;521 5721 5853 23379;23380 23379 HFVLDECDK 9 1 0 Unmodified _HFVLDECDK_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.7704 2 581.763506 1161.51246 79158.3 0.9563 0.00055634 -0.73337 -0.00042665 0.22293 0.00012969 581.763375494957 585.770229017638 36.488 0.60007 36.488 36.269 36.869 0 169 46 5 0 0 0 0.0021531 1 18692 76.1 66.917 1 1.5101 1.5313 0 29553000 13938000 15615000 14996 1359;521 5721 5853 23381 23381 HGATHVFASK 10 1 0 Unmodified _HGATHVFASK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 354.857 3 352.185802 1053.53558 100809.3 0.22268 7.8424E-05 -0.14431 -5.0824E-05 0.07837 2.7601E-05 352.185704582839 354.857075970946 17.605 0.3349 17.605 17.473 17.808 0 44 12 7 0 0 0 0.00013542 1 4724 70.908 59.689 1 2.588 2.6818 0 12633000 3441700 9191300 14997 1391 5722 5854 23382 23382 HGATHVFASK 10 1 0 Unmodified _HGATHVFASK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.7744 2 527.775065 1053.53558 NaN NaN NaN NaN NaN NaN NaN NaN NaN 17.648 1 17.648 17.148 18.148 0 0 0 0 0.018623 1 4770 54.416 38.754 1 14998 1391 5722 5854 23383 23383 HGATHVFASK 10 1 0 Unmodified _HGATHVFASK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 354.8571 3 352.185802 1053.53558 100733.7 -0.27669 -9.7447E-05 -0.16096 -5.6687E-05 -0.43765 -0.00015413 352.185701048363 354.857091611537 16.318 0.46748 16.318 16.186 16.654 0 116 26 7 0 0 0 0.00057476 1 3487 63.734 58.828 1 2.4658 2.5361 0 11647000 3035800 8611100 14999 1391 5722 5854 23384 23384 HGATHVFASK 10 1 0 Unmodified _HGATHVFASK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 531.7826 2 527.775065 1053.53558 85928.03 0.10887 5.7458E-05 0.15172 8.0074E-05 0.26059 0.00013753 527.775401052746 531.782036450276 17.298 0.36146 17.298 17.197 17.558 0 54 17 6 0 0 0 0.0065076 1 3728 58.699 49.485 1 5.8295 4.9194 0 2102200 339820 1762400 15000 1391 5722 5854 23385 23385 HGDEIITSTTSNYETQTFSSK 21 1 0 Unmodified _HGDEIITSTTSNYETQTFSSK_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.0304 3 782.695914 2345.06591 69095.24 0.51258 0.0004012 0.17329 0.00013564 0.68588 0.00053683 783.030293290296 785.367407546108 77.753 0.48264 77.753 77.537 78.02 0 158 31 7 0 0 0 0.019684 1 41721 19.022 19.022 1 0.96849 0.76825 0 4542400 2368600 2173800 15001 1854 5723 5855 23386 23386 HGDLPDIQIK 10 1 0 Unmodified _HGDLPDIQIK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.3163 2 568.308938 1134.60332 81107.84 0.66024 0.00037522 0.32351 0.00018385 0.98375 0.00055907 568.309028205777 572.316048335875 64.191 0.9761 64.191 63.624 64.6 0 476 89 8 0 0 0 1.0045E-05 2 36870 105.2 82.455 1 0.84352 0.93596 0 59284000 36471000 22813000 15002 1665 5724 5856 23387;23388 23388 HGDLPDIQIK 10 1 0 Unmodified _HGDLPDIQIK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.3091 2 568.308938 1134.60332 NaN NaN NaN 0.12153 6.9066E-05 NaN NaN NaN NaN 62.186 1.0513 62.186 61.651 62.703 3.8147E-06 0 0 0 1.1674E-29 1 36483 157.59 98.808 1 NaN NaN 0 19162000 19162000 0 15003 1665 5724 5856 23389 23389 HGDLPDIQIK 10 1 0 Unmodified _HGDLPDIQIK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.3092 2 568.308938 1134.60332 80770.09 0.5563 0.00031615 -0.00088199 -5.0124E-07 0.55542 0.00031565 568.308913563059 572.315532836831 73.028 1.3892 73.028 72.739 74.129 0 363 96 8 0 0 0 0.00026516 1 38611 103.7 86.074 1 0.42546 0.32979 0 13631000 9292400 4338700 15004 1665 5724 5856 23390 23390 HGDLPDIQIK 10 1 0 Unmodified _HGDLPDIQIK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.3094 2 568.308938 1134.60332 NaN NaN NaN 0.12099 6.876E-05 NaN NaN NaN NaN 73.372 1.4003 73.372 73.078 74.478 -7.6294E-06 0 0 0 1.1229E-07 1 37985 109.29 80.129 1 NaN NaN 0 8590800 8590800 0 15005 1665 5724 5856 23391 23391 HGDVITIIDR 10 0 1 Unmodified _HGDVITIIDR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.8188 2 569.814387 1137.61422 81428.84 0.44711 0.00025477 -0.2014 -0.00011476 0.24571 0.00014001 569.814237612822 574.818447735249 62.623 1.8905 62.623 61.756 63.646 0 702 174 7 0 0 0 3.9302E-30 2 35826 175.91 148.66 1 1.7382 1.9659 0 103650000 34610000 69044000 15006 1569 5725 5857 23392;23393 23392 HGEVCPAGWK 10 1 0 Unmodified _HGEVCPAGWK_ 0 0 0 Q06830;B2R4P2;A0A0A0MRQ5;H7C3T4;V9HW63;Q13162 Q06830 Q06830 PRDX1;PRDX4;HEL-S-97n Peroxiredoxin-1;Peroxiredoxin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.7673 2 570.766383 1139.51821 78384.78 0.53274 0.00030407 -0.78789 -0.0004497 -0.25515 -0.00014563 570.766152288318 574.772803479426 27.474 0.2937 27.474 27.317 27.61 0 34 17 4 0 0 0 9.7206E-05 1 12697 97.431 86.721 1 2.6212 2.7178 0 12598000 3781100 8816800 15007 1690 5726 5858 23394 23394 HGEVCPAGWK 10 1 0 Unmodified _HGEVCPAGWK_ 0 0 0 Q06830;B2R4P2;A0A0A0MRQ5;H7C3T4;V9HW63;Q13162 Q06830 Q06830 PRDX1;PRDX4;HEL-S-97n Peroxiredoxin-1;Peroxiredoxin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.7742 2 570.766383 1139.51821 78973.48 0.76162 0.00043471 -0.82619 -0.00047156 -0.064567 -3.6853E-05 570.76585836865 574.773199682177 26.656 0.40152 26.656 26.503 26.905 0 67 19 5 0 0 0 1.621E-09 1 11997 131.06 124.61 1 1.3831 1.4095 0 30885000 7181200 23704000 15008 1690 5726 5858 23395 23395 HGFCGIPITDTGR 13 0 1 Unmodified _HGFCGIPITDTGR_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.903 3 477.566354 1429.67723 90696.41 -0.1325 -6.3276E-05 0.49439 0.0002361 0.36189 0.00017283 477.566585153858 481.237203256046 67.014 0.61106 67.013 66.729 67.34 -7.6294E-06 161 46 6 0 0 0 0.010451 1 38668 21.942 18.746 1 0.99112 1.0246 0 10299000 4988200 5310500 15009 1282 5727 5859 23396 23396 HGFCGIPITDTGR 13 0 1 Unmodified _HGFCGIPITDTGR_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.85 2 715.845893 1429.67723 NaN NaN NaN -0.023214 -1.6618E-05 NaN NaN NaN NaN 64.709 0.75672 64.709 64.25 65.006 0 0 0 0 0.00040121 2 38034 85.377 77.732 1 NaN NaN 0 20544000 0 20544000 15010 1282 5727 5859 23397;23398 23397 HGFCGIPITDTGR 13 0 1 Unmodified _HGFCGIPITDTGR_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.8508 2 715.845893 1429.67723 71515.68 0.72279 0.00051741 -0.080969 -5.7961E-05 0.64182 0.00045944 715.845669988594 720.850020998766 75.318 0.90147 75.318 74.921 75.822 0 316 65 7 0 0 0 0.020216 1 39982 35.71 31.412 1 1.232 1.0585 0 7981200 3813100 4168100 15011 1282 5727 5859 23399 23399 HGFLEEFITPIVK 13 1 0 Unmodified _HGFLEEFITPIVK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.951 3 510.616932 1528.82897 85649.88 0.61176 0.00031238 -0.26594 -0.00013579 0.34582 0.00017658 510.616792674729 513.288237917018 119.83 0.83254 119.83 119.39 120.22 7.6294E-06 218 56 6 0 0 0 2.5664E-05 1 77003 93.959 89.158 1 0.58788 0.60093 0 13136000 8813700 4322700 15012 1679 5728 5860 23400 23400 HGFLEEFITPIVK 13 1 0 Unmodified _HGFLEEFITPIVK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.429 2 765.421759 1528.82897 NaN NaN NaN -0.39118 -0.00029942 NaN NaN NaN NaN 119.89 1.3468 119.89 119.28 120.62 0 0 0 0 5.493E-48 1 77153 171.62 158.52 1 NaN NaN 0 12533000 0 12533000 15013 1679 5728 5860 23401 23401 HGFLEEFITPIVK 13 1 0 Unmodified _HGFLEEFITPIVK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.2886 3 510.616932 1528.82897 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.74 1 119.74 119.24 120.24 0 0 0 0 0.028309 1 77081 54.343 49.452 1 15014 1679 5728 5860 23402 23402 HGFLEEFITPIVK 13 1 0 Unmodified _HGFLEEFITPIVK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.6173 3 510.616932 1528.82897 85851.35 0.43891 0.00022411 -0.10301 -5.2601E-05 0.33589 0.00017151 510.95123335079 513.288275262945 118.73 0.97601 118.73 118.23 119.21 0 276 61 6 0 0 0 7.4131E-05 2 77850 68.515 68.515 1 0.65603 0.66634 0 16724000 10056000 6667700 15015 1679 5728 5860 23403;23404 23403 HGFLEEFITPIVK 13 1 0 Unmodified _HGFLEEFITPIVK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.4222 2 765.421759 1528.82897 70081.1 0.66602 0.00050978 0.20619 0.00015782 0.87221 0.00066761 765.92350267733 769.428916681065 118.67 1.1748 118.67 118.13 119.3 7.6294E-06 390 74 8 0 0 0 2.2021E-13 2 77978 141.88 128.53 1 0.6127 0.68206 0 51257000 31382000 19875000 15016 1679 5728 5860 23405;23406 23405 HGFLEEFITPIVK 13 1 0 Unmodified _HGFLEEFITPIVK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.6232 3 510.616932 1528.82897 84977.15 0.69936 0.0003571 -0.28932 -0.00014773 0.41003 0.00020937 510.951090831549 513.288066591957 128.97 0.74396 128.97 128.76 129.5 0 196 34 8 0 0 0 0.0024641 2 77901 39.424 39.424 1 1.1152 0.88008 0 5380800 2492000 2888900 15017 1679 5728 5860 23407;23408 23407 HGFLEEFITPIVK 13 1 0 Unmodified _HGFLEEFITPIVK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.4297 2 765.421759 1528.82897 69684.58 0.84944 0.00065018 -0.1115 -8.5344E-05 0.73794 0.00056483 765.42186686032 769.429247083059 128.96 1.1623 128.96 128.65 129.81 0 307 53 9 0 0 0 1.4777E-23 2 77953 155 139.74 1 1.0808 0.84279 0 15849000 7426800 8422100 15018 1679 5728 5860 23409;23410 23410 HGFLEEFITPIVK 13 1 0 Unmodified _HGFLEEFITPIVK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.2883 3 510.616932 1528.82897 83887.99 0.71117 0.00036313 -0.14103 -7.201E-05 0.57014 0.00029112 510.951128142501 513.288170395517 128.77 0.75002 128.77 128.47 129.22 0 161 30 8 0 0 0 0.0024641 2 76787 31.708 31.526 1 1.1555 0.94622 0 8571700 4060600 4511200 15019 1679 5728 5860 23411;23412 23411 HGFLEEFITPIVK 13 1 0 Unmodified _HGFLEEFITPIVK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.4225 2 765.421759 1528.82897 69723.69 1.0215 0.0007819 -0.020252 -1.5501E-05 1.0013 0.0007664 765.421935507922 769.429190825246 128.76 1.006 128.76 128.37 129.38 0 254 41 10 0 0 0 0.00013611 2 76820 103.31 97.971 1 1.0735 0.8885 0 33385000 15870000 17515000 15020 1679 5728 5860 23413;23414 23413 HGGGGGGFGGGGFGSR 16 0 1 Unmodified _HGGGGGGFGGGGFGSR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.7958 2 660.795049 1319.57554 NaN NaN NaN 0.21596 0.00014271 NaN NaN NaN NaN 26.477 0.45305 26.477 26.255 26.708 0 0 0 0 3.345E-35 1 11832 144.1 130.75 1 NaN NaN 0 19666000 19666000 0 + 15021 1166 5729 5861 23415 23415 HGGGGGGFGGGGFGSR 16 0 1 Unmodified _HGGGGGGFGGGGFGSR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.8657 3 440.865791 1319.57554 NaN NaN NaN -0.30117 -0.00013277 NaN NaN NaN NaN 26.551 0.49635 26.551 26.268 26.764 1.9073E-06 0 0 0 0.00094468 1 11892 50.305 47.354 1 NaN NaN 0 15834000 15834000 0 + 15022 1166 5729 5861 23416 23416 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK 35 1 0 Unmodified _HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.4022 3 877.402787 2629.18653 64542.94 0.6035 0.00052952 0.038973 3.4195E-05 0.64248 0.00056371 877.737074584279 880.40857513069 51.105 0.36612 51.105 50.913 51.279 0 232 32 10 0 0 0 1.5433E-19 2 28191 65.465 63.177 1 1.1075 1.2118 0 51813000 24799000 27014000 15023 1336 5730 5862 23417;23418 23418 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK 35 1 0 Unmodified _HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.0767 3 877.402787 2629.18653 64751.54 0.37628 0.00033015 -0.060556 -5.3132E-05 0.31572 0.00027701 877.736997760149 880.408430028723 49.584 0.36684 49.584 49.406 49.773 3.8147E-06 185 28 10 0 0 0 2.4148E-45 3 27868 122.7 119.98 1 1.0906 1.2304 0 63395000 28882000 34513000 15024 1336 5730 5862 23419;23420;23421 23421 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK 35 1 0 Unmodified _HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 877.738 3 877.402787 2629.18653 64860.07 0.40731 0.00035737 -0.13406 -0.00011762 0.27325 0.00023975 877.737011278036 880.407924696041 60.231 0.60991 60.231 59.927 60.537 0 336 44 10 0 0 0 0.018728 1 30715 13.948 11.224 1 1.9952 1.554 0 12314000 4093800 8220300 15025 1336 5730 5862 23422 23422 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK 35 1 0 Unmodified _HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 877.7377 3 877.402787 2629.18653 64776.52 0.14804 0.00012989 0.13216 0.00011596 0.28021 0.00024585 877.737261578129 880.408098426107 60.904 0.57859 60.904 60.606 61.185 0 357 50 10 0 0 0 2.8893E-05 2 30487 35.505 32.781 1 2.1144 1.7171 0 13130000 4233800 8896600 15026 1336 5730 5862 23423;23424 23424 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 1 Unmodified _HGGSPQPLATTPLSQEPVNPPSEASPTR_ 0 0 0 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 954.8157 3 951.477293 2851.41005 65731.18 0.62159 0.00059143 0.058247 5.5421E-05 0.67984 0.00064685 951.811972707137 954.813917944909 77.735 0.31083 77.735 77.605 77.916 0 73 25 5 0 0 0 0.00065121 3 47041 24.653 24.653 1 1.9253 1.8963 0 13185000 6185200 6999800 15027 619 5731 5863 23425;23426;23427 23425 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 1 Unmodified _HGGSPQPLATTPLSQEPVNPPSEASPTR_ 0 0 0 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 951.8119 3 951.477293 2851.41005 65607.63 0.23523 0.00022382 -0.2124 -0.0002021 0.022827 2.1719E-05 951.811455093398 955.147493033948 90.071 0.3453 90.071 89.914 90.259 0 63 23 4 0 0 0 0.047716 1 49077 10.238 10.238 1 0.85224 0.76829 0 2059200 1088000 971240 15028 619 5731 5863 23428 23428 HGGTIPIVPTAEFQDR 16 0 1 Unmodified _HGGTIPIVPTAEFQDR_ 0 0 0 B4E0N9;B4DMG8;B4DMF5;B3KT18;Q53GW3;E9KL48;P00367;Q14400 B4E0N9 B4E0N9 GLUD1 Glutamate dehydrogenase;Glutamate dehydrogenase 1, mitochondrial ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.969 3 579.968804 1736.88458 NaN NaN NaN -0.0077456 -4.4922E-06 NaN NaN NaN NaN 97.539 0.54765 97.539 97.247 97.794 0 0 0 0 0.030214 1 54065 20.939 9.8336 1 NaN NaN 0 1072300 1072300 0 15029 941 5732 5864 23429 23429 HGIPTAQWK 9 1 0 Unmodified _HGIPTAQWK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.2803 2 519.279983 1036.54541 NaN NaN NaN 0.53533 0.00027799 NaN NaN NaN NaN 34.123 0.23614 34.123 33.992 34.228 0 0 0 0 0.0015777 1 17215 85.38 65.593 1 NaN NaN 0 4309700 4309700 0 15030 1507 5733 5865 23430 23430 HGLINFGIYK 10 1 0 Unmodified _HGLINFGIYK_ 0 0 0 A8K2R3;O60341 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.3317 2 581.324391 1160.63423 80112.68 0.61808 0.0003593 0.82061 0.00047704 1.4387 0.00083635 581.826381433694 585.331525874851 94.174 0.64015 94.174 93.907 94.547 0 185 40 7 0 0 0 0.0099866 1 51797 53.968 53.968 1 1.3156 1.0437 0 2352300 1045700 1306600 15031 711 5734 5866 23431 23431 HGLLVPNNTTDQELQHIR 18 0 1 Unmodified _HGLLVPNNTTDQELQHIR_ 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.3713 3 695.699376 2084.0763 73199.77 0.63805 0.00044389 0.48957 0.0003406 1.1276 0.00078448 695.699512866518 699.370930069947 70.396 1.087 70.396 69.815 70.903 0 270 94 5 0 0 0 3.8996E-12 2 40922 103.04 103.04 1 0.88419 0.90603 0 35985000 20003000 15982000 15032 1619 5735 5867 23432;23433 23433 HGLLVPNNTTDQELQHIR 18 0 1 Unmodified _HGLLVPNNTTDQELQHIR_ 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.6968 3 695.699376 2084.0763 NaN NaN NaN -1.9601 -0.0013636 NaN NaN NaN NaN 71.02 0.42923 71.02 70.832 71.261 0 0 0 0 1.9215E-06 1 41436 54.974 46.15 1 NaN NaN 0 18242000 18242000 0 15033 1619 5735 5867 23434 23434 HGLLVPNNTTDQELQHIR 18 0 1 Unmodified _HGLLVPNNTTDQELQHIR_ 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.0355 3 695.699376 2084.0763 72829.59 0.60514 0.000421 -0.19707 -0.0001371 0.40807 0.0002839 696.033656673251 699.369174320741 67.52 1.2155 67.52 66.937 68.153 0 429 103 6 0 0 0 8.1086E-17 3 40255 114.63 114.63 1 0.85305 0.9699 0 120990000 64398000 56592000 15034 1619 5735 5867 23435;23436;23437 23436 HGLLVPNNTTDQELQHIR 18 0 1 Unmodified _HGLLVPNNTTDQELQHIR_ 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.0359 3 695.699376 2084.0763 NaN NaN NaN -0.023434 -1.6303E-05 NaN NaN NaN NaN 67.458 1.0749 67.458 66.925 68 0 0 0 0 0.00015313 1 39709 58.98 49.697 1 NaN NaN 0 55320000 0 55320000 15035 1619 5735 5867 23438 23438 HGLLVPNNTTDQELQHIR 18 0 1 Unmodified _HGLLVPNNTTDQELQHIR_ 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.034 3 695.699376 2084.0763 72568.12 0.45768 0.0003184 -0.0045001 -3.1307E-06 0.45318 0.00031527 696.033712814355 699.369582753719 78.646 1.8387 78.646 78.221 80.06 0 715 114 12 0 0 0 2.9495E-12 2 42136 105.39 105.39 1 1.135 0.9791 0 78130000 36456000 41674000 15036 1619 5735 5867 23439;23440 23440 HGLLVPNNTTDQELQHIR 18 0 1 Unmodified _HGLLVPNNTTDQELQHIR_ 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.0267 4 522.026351 2084.0763 81594.58 0.24264 0.00012667 0.21754 0.00011356 0.46019 0.00024023 522.277190216006 524.779405222396 78.643 0.90544 78.643 78.393 79.299 0 309 55 10 0 0 0 2.1712E-05 2 42204 76.341 76.341 1 1.0937 0.89234 0 14725000 6962200 7762300 15037 1619 5735 5867 23441;23442 23442 HGLLVPNNTTDQELQHIR 18 0 1 Unmodified _HGLLVPNNTTDQELQHIR_ 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.0341 3 695.699376 2084.0763 72098.02 0.52529 0.00036544 -0.021411 -1.4896E-05 0.50388 0.00035055 696.033645828723 699.035463238655 78.543 1.4519 78.543 78.226 79.677 0 691 91 12 0 0 0 3.3282E-12 2 41247 104.45 104.45 1 1.0996 0.95974 0 85496000 42913000 42583000 15038 1619 5735 5867 23443;23444 23444 HGLQLGAQSPGR 12 0 1 Unmodified _HGLQLGAQSPGR_ 0 0 0 Q8N1G0;A6PVV7 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.7963 2 610.82836 1219.64217 77465.3 0.63741 0.00038935 -0.3994 -0.00024397 0.23801 0.00014538 610.827902028123 615.83232964691 28.942 0.20741 28.942 28.776 28.983 1.9073E-06 35 10 5 0 0 0 0.027831 1 13846 57.174 57.174 1 0.93539 0.96073 0 19435000 10428000 9007500 15039 1905 5736 5868 23445 23445 HGLQLGAQSPGR 12 0 1 Unmodified _HGLQLGAQSPGR_ 0 0 0 Q8N1G0;A6PVV7 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.8286 2 610.82836 1219.64217 77202.47 0.34794 0.00021253 0.31419 0.00019192 0.66214 0.00040445 611.330083176986 615.832430186938 28.05 0.26005 28.05 27.889 28.149 1.9073E-06 62 14 6 0 0 0 3.4869E-08 1 13213 117.52 117.52 1 0.94347 1.0186 0 26506000 14873000 11633000 15040 1905 5736 5868 23446 23446 HGLQLGAQSPGR 12 0 1 Unmodified _HGLQLGAQSPGR_ 0 0 0 Q8N1G0;A6PVV7 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.8292 2 610.82836 1219.64217 76683.11 0.43507 0.00026575 -0.050005 -3.0544E-05 0.38506 0.00023521 610.828228673793 615.832476904087 32.635 0.39042 32.635 32.463 32.853 0 60 15 5 0 0 0 0.0029264 1 13623 57.347 57.347 1 1.7868 1.5499 0 2665800 831830 1833900 15041 1905 5736 5868 23447 23447 HGLTYATIDGSVNPK 15 1 0 Unmodified _HGLTYATIDGSVNPK_ 0 0 0 A0A024R0F1;Q9UNY4;X6RI15 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.9048 2 786.904462 1571.79437 NaN NaN NaN 0.67326 0.00052979 NaN NaN NaN NaN 55.906 0.37138 55.906 55.682 56.053 0 0 0 0 1.2241E-15 1 32063 120.57 95.719 1 NaN NaN 0 10706000 10706000 0 15042 44 5737 5869 23448 23448 HGLTYATIDGSVNPK 15 1 0 Unmodified _HGLTYATIDGSVNPK_ 0 0 0 A0A024R0F1;Q9UNY4;X6RI15 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.4135 2 786.904462 1571.79437 68757.35 0.66071 0.00051991 -0.20368 -0.00016028 0.45702 0.00035963 786.904325721076 790.911440092447 66.788 0.53888 66.788 66.566 67.105 0 164 34 7 0 0 0 0.00013549 1 34689 80.318 70.886 1 1.9412 1.5105 0 3370800 1120800 2250100 15043 44 5737 5869 23449 23449 HGLVPFAFVR 10 0 1 Unmodified _HGLVPFAFVR_ 0 0 0 Q13242;A8K3M9;H0YIB4;S4R3G0;B4DFT9 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.8318 2 571.827101 1141.63965 80707.34 0.72817 0.00041638 -0.25292 -0.00014463 0.47525 0.00027176 571.826480798194 576.831045955662 98.319 1.157 98.319 97.624 98.781 0 191 96 4 0 0 0 0.0088235 2 61181 66.682 66.682 1 1.7025 1.7054 0 18608000 6519500 12089000 15044 1709 5738 5870 23450;23451 23450 HGLVPFAFVR 10 0 1 Unmodified _HGLVPFAFVR_ 0 0 0 Q13242;A8K3M9;H0YIB4;S4R3G0;B4DFT9 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.8327 2 571.827101 1141.63965 75953.12 0.60931 0.00034842 1.853 0.0010596 2.4623 0.001408 571.828165075876 576.831879304381 109.84 0.58736 109.84 109.57 110.15 -7.6294E-06 100 30 5 0 0 0 0.024135 1 63301 54.549 54.549 1 0.95332 0.81739 0 2725800 1451400 1274400 15045 1709 5738 5870 23452 23452 HGLVPFAFVR 10 0 1 Unmodified _HGLVPFAFVR_ 0 0 0 Q13242;A8K3M9;H0YIB4;S4R3G0;B4DFT9 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.8315 2 571.827101 1141.63965 81653.77 0.60893 0.0003482 0.51662 0.00029542 1.1256 0.00064362 571.827346519915 576.831654294265 109.43 0.64102 109.43 109.12 109.76 0 76 28 4 0 0 0 0.024135 1 62017 54.549 54.549 1 1.1671 1.0534 0 2219800 1069000 1150900 15046 1709 5738 5870 23453 23453 HGNYFAYVQMFNSR 14 0 1 Unmodified _HGNYFAYVQMFNSR_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.9362 3 578.599946 1732.77801 85427.62 0.71275 0.0004124 -0.018801 -1.0878E-05 0.69395 0.00040152 578.599910000274 581.936001372871 110.67 0.35881 110.67 110.53 110.89 0 30 15 4 0 0 0 0.047906 1 64014 17.962 17.962 1 1.4531 1.2884 0 1251900 488310 763580 15047 2042 5739 5871 23454 23454 HGPLALVDK 9 1 0 Unmodified _HGPLALVDK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.2845 2 475.276909 948.539266 89374.33 0.41956 0.00019941 -0.025819 -1.2271E-05 0.39374 0.00018713 475.276634176288 479.283972395411 41.517 0.39356 41.517 41.332 41.726 0 103 35 5 0 0 0 0.001665 1 21840 82.452 65.067 1 2.4381 2.6218 0 38764000 12452000 26312000 15048 1688 5740 5872 23455 23455 HGPLALVDK 9 1 0 Unmodified _HGPLALVDK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2843 2 475.276909 948.539266 90435.16 0.48195 0.00022906 0.24939 0.00011853 0.73134 0.00034759 475.276827985077 479.284089114574 39.775 0.42803 39.775 39.588 40.016 0 108 36 5 0 0 0 0.0030108 1 21152 72.879 55.514 1 2.3115 2.5611 0 46739000 13509000 33231000 15049 1688 5740 5872 23456 23456 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 P39023;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.2748 2 492.274701 982.534849 85313.06 0.33727 0.00016603 -0.041658 -2.0507E-05 0.29561 0.00014552 492.274723449296 497.278749932052 57.522 2.1542 57.522 57.063 59.218 3.8147E-06 547 168 10 0 0 0 8.2076E-08 3 32250 141.52 101.87 1 0.99645 1.1796 0 365630000 196920000 168720000 15050 1554;936 5741 5873 23457;23458;23459 23458 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 P39023;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.2761 2 492.274701 982.534849 NaN NaN NaN -0.016593 -8.1685E-06 NaN NaN NaN NaN 58.057 1.6272 58.057 57.779 59.406 -3.8147E-06 0 0 0 9.8711E-34 1 32803 171.38 121.26 1 NaN NaN 0 123270000 123270000 0 15051 1554;936 5741 5873 23460 23460 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 P39023;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 328.5187 3 328.518893 982.534849 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.407 1 57.407 56.907 57.907 3.8147E-06 0 0 0 0.004886 1 32428 79.906 36.66 1 15052 1554;936 5741 5873 23461 23461 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 P39023;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.278 2 492.274701 982.534849 83805.84 0.18718 9.2145E-05 -0.35068 -0.00017263 -0.1635 -8.0489E-05 492.274441854685 497.278619369698 54.792 2.0736 54.792 54.464 56.538 0 611 163 8 0 0 0 2.5503E-05 5 31717 113.5 88.316 1 0.98764 1.1564 0 677290000 335510000 341790000 15053 1554;936 5741 5873 23462;23463;23464;23465;23466 23464 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 P39023;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 328.5189 3 328.518893 982.534849 NaN NaN NaN -0.059827 -1.9654E-05 NaN NaN NaN NaN 54.859 0.35485 54.859 54.648 55.003 -3.8147E-06 0 0 0 0.0070813 1 31361 46.129 18.999 1 NaN NaN 0 4024400 4024400 0 15054 1554;936 5741 5873 23467 23467 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 P39023;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 331.8548 3 328.518893 982.534849 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.742 1 54.742 54.242 55.242 3.8147E-06 0 0 0 0.042649 1 31317 58.981 31.727 1 15055 1554;936 5741 5873 23468 23468 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 P39023;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.2789 2 492.274701 982.534849 83519.52 0.28858 0.00014206 -0.22022 -0.00010841 0.068359 3.3651E-05 492.274434619054 497.278846121956 64.835 2.9035 64.835 64.23 67.133 0 884 199 8 0 0 0 1.8894E-05 5 33742 119.17 85.623 1 1.0657 0.91866 0 69399000 33219000 36180000 15056 1554;936 5741 5873 23469;23470;23471;23472;23473 23471 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 P39023;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.2751 2 492.274701 982.534849 83884.15 -0.041104 -2.0235E-05 0.23069 0.00011356 0.18959 9.333E-05 492.274751148779 497.278977808065 64.664 2.5375 64.664 64.18 66.717 0 875 196 8 0 0 0 0.000204 3 32814 106.36 82.499 1 1.108 0.96683 0 63063000 30463000 32600000 15057 1554;936 5741 5873 23474;23475;23476 23475 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 P39023;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.2743 2 492.274701 982.534849 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.347 1 65.347 64.847 65.847 -7.6294E-06 0 0 0 0.015104 1 33009 58.716 26.246 1 15058 1554;936 5741 5873 23477 23477 HGVQELEIELQSQLSK 16 1 0 Unmodified _HGVQELEIELQSQLSK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.3245 3 613.326657 1836.95814 NaN NaN NaN -0.41553 -0.00025486 NaN NaN NaN NaN 101.53 0.5274 101.53 101.05 101.57 0 0 0 0 0.001829 1 62096 38.777 29.087 1 NaN NaN 0 60389000 60389000 0 + 15059 1165 5742 5874 23478 23478 HGVQELEIELQSQLSK 16 1 0 Unmodified _HGVQELEIELQSQLSK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 919.9875 2 919.486347 1836.95814 NaN NaN NaN -0.24906 -0.00022901 NaN NaN NaN NaN 101.76 0.86538 101.76 101.1 101.97 0 0 0 0 1.6522E-05 1 62202 79.875 70.512 1 NaN NaN 0 68059000 68059000 0 + 15060 1165 5742 5874 23479 23479 HGVQELEIELQSQLSK 16 1 0 Unmodified _HGVQELEIELQSQLSK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.3269 3 613.326657 1836.95814 NaN NaN NaN -0.025638 -1.5725E-05 NaN NaN NaN NaN 102.08 1.5208 102.08 101.56 103.08 0 0 0 0 1.0322E-18 2 62700 114.27 100.01 1 NaN NaN 0 104750000 104750000 0 + 15061 1165 5742 5874 23480;23481 23480 HGVQELEIELQSQLSK 16 1 0 Unmodified _HGVQELEIELQSQLSK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.9885 2 919.486347 1836.95814 NaN NaN NaN -0.42488 -0.00039067 NaN NaN NaN NaN 100.29 1.4494 100.29 99.727 101.18 0 0 0 0 4.2722E-36 2 63350 154.65 126.99 1 NaN NaN 0 131180000 131180000 0 + 15062 1165 5742 5874 23482;23483 23483 HGVQELEIELQSQLSK 16 1 0 Unmodified _HGVQELEIELQSQLSK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 919.4872 2 919.486347 1836.95814 NaN NaN NaN -0.25815 -0.00023737 NaN NaN NaN NaN 112.97 1.1267 112.97 112.68 113.81 0 0 0 0 0.0025231 1 65669 59.705 53.007 1 NaN NaN 0 58657000 58657000 0 + 15063 1165 5742 5874 23484 23484 HGVQELEIELQSQLSK 16 1 0 Unmodified _HGVQELEIELQSQLSK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.3272 3 613.326657 1836.95814 NaN NaN NaN -0.063751 -3.91E-05 NaN NaN NaN NaN 112.74 1.5202 112.74 112.25 113.77 0 0 0 0 0.00068292 1 64571 48.547 43.454 1 NaN NaN 0 36548000 36548000 0 + 15064 1165 5742 5874 23485 23485 HGVVPLATYMR 11 0 1 Oxidation (M) _HGVVPLATYM(ox)R_ HGVVPLATYM(1)R HGVVPLATYM(64.84)R 0 1 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3358 2 630.33189 1258.64923 73275.34 0.77305 0.00048728 -0.0070984 -4.4744E-06 0.76595 0.0004828 630.332068627191 635.336018542986 49.374 0.93097 49.374 49.106 50.037 0 356 65 9 0 0 0 0.00086521 3 26979 64.841 60.228 1 1.9447 2.3025 0 385860000 125990000 259880000 15065 1571 5743 5875 23486;23487;23488 23486 1351 HGVVPLATYMR 11 0 1 Oxidation (M) _HGVVPLATYM(ox)R_ HGVVPLATYM(1)R HGVVPLATYM(63.82)R 0 1 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.8377 2 630.33189 1258.64923 75678.6 0.83537 0.00052656 -0.076648 -4.8314E-05 0.75872 0.00047825 630.331899466282 635.335921138366 47.467 0.73777 47.467 47.099 47.837 0 234 53 6 0 0 0 0.00093003 3 26168 63.816 54.953 1 2.0102 2.345 0 505320000 167500000 337820000 15066 1571 5743 5875 23489;23490;23491 23490 1351 HGVVPLATYMR 11 0 1 Oxidation (M) _HGVVPLATYM(ox)R_ HGVVPLATYM(1)R HGVVPLATYM(50.45)R 0 1 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.8932 3 420.557019 1258.64923 91011.33 0.35201 0.00014804 0.30868 0.00012982 0.66069 0.00027786 420.557074477873 423.893218938381 47.461 0.55872 47.461 47.136 47.694 -3.8147E-06 205 39 8 0 0 0 0.0021866 1 26322 50.452 44.418 1 2.0992 2.4026 0 163550000 47643000 115910000 15067 1571 5743 5875 23492 23492 1351 HGVVPLATYMR 11 0 1 Oxidation (M) _HGVVPLATYM(ox)R_ HGVVPLATYM(1)R HGVVPLATYM(47.82)R 0 1 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.3328 2 630.33189 1258.64923 74725.13 0.55771 0.00035154 0.099712 6.2852E-05 0.65742 0.0004144 630.33197501577 635.336161364555 56.107 1.121 56.107 55.729 56.85 0 287 71 6 0 0 0 0.0060597 1 28080 47.823 43.04 1 0.45191 0.37914 0 10044000 6887900 3156200 15068 1571 5743 5875 23493 23493 1351 HGVVPLATYMR 11 0 1 Oxidation (M) _HGVVPLATYM(ox)R_ HGVVPLATYM(1)R HGVVPLATYM(47.82)R 0 1 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.3329 2 630.33189 1258.64923 75828.52 0.60428 0.0003809 -0.12826 -8.0849E-05 0.47602 0.00030005 630.332182501825 635.335942168152 56.218 1.0565 56.218 55.652 56.709 3.8147E-06 333 72 7 0 0 0 0.0060597 2 27666 47.823 43.04 1 0.47148 0.39181 0 7623100 5273900 2349200 15069 1571 5743 5875 23494;23495 23495 1351 HGVVPLATYMR 11 0 1 Unmodified _HGVVPLATYMR_ 0 0 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.8367 2 622.334433 1242.65431 NaN NaN NaN 0.21535 0.00013402 NaN NaN NaN NaN 71.875 0.77499 71.875 71.565 72.34 0 0 0 0 0.046979 1 42016 45.161 30.954 1 NaN NaN 0 8860700 8860700 0 15070 1571 5743 5876 23496 23496 HGVVPLATYMR 11 0 1 Unmodified _HGVVPLATYMR_ 0 0 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.3348 2 622.334433 1242.65431 76977.77 0.40464 0.00025182 -0.88757 -0.00055236 -0.48293 -0.00030054 622.333731610221 627.338432007735 79.975 0.88252 79.975 79.553 80.435 0 279 52 9 0 0 0 0.013734 1 42240 47.198 47.198 1 1.0126 0.82809 0 13185000 6530100 6655200 15071 1571 5743 5876 23497 23497 HGVVSCSGVAR 11 0 1 Unmodified _HGVVSCSGVAR_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.788 2 564.782564 1127.55058 81990.26 0.7257 0.00040986 0.27659 0.00015621 1.0023 0.00056608 564.783238980002 569.786201264433 19.25 0.20156 19.25 19.127 19.329 0 36 10 6 0 0 0 0.00099077 1 5941 70.929 70.929 1 0.89378 0.91433 0 33563000 16071000 17492000 15072 1450 5744 5877 23498 23498 HGVVSCSGVAR 11 0 1 Unmodified _HGVVSCSGVAR_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.7828 2 564.782564 1127.55058 81193.58 0.30687 0.00017331 0.50347 0.00028435 0.81034 0.00045766 564.782758370384 569.786827539546 19.148 0.28442 19.148 19.025 19.31 0 32 9 7 0 0 0 7.8729E-05 1 5619 98.055 85.848 1 1.3042 1.4631 0 45499000 21056000 24443000 15073 1450 5744 5877 23499 23499 HGVVSCSGVAR 11 0 1 Unmodified _HGVVSCSGVAR_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.7866 2 564.782564 1127.55058 79580.24 0.084165 4.7535E-05 -0.23197 -0.00013101 -0.1478 -8.3475E-05 564.782465997022 569.786789834728 20.222 0.31967 20.222 20.123 20.442 0 47 9 8 0 0 0 0.00043233 2 5696 78.939 64.782 1 1.8595 1.5231 0 12966000 4242600 8723600 15074 1450 5744 5877 23500;23501 23500 HGVVSCSGVAR 11 0 1 Unmodified _HGVVSCSGVAR_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.7831 2 564.782564 1127.55058 79278.77 0.030402 1.7171E-05 0.18217 0.00010289 0.21257 0.00012006 564.782610441476 569.786956667422 20.096 0.41262 20.096 19.957 20.37 0 65 13 9 0 0 0 0.00059163 1 5136 73.985 63.998 1 1.7015 1.417 0 7051600 2653600 4398000 15075 1450 5744 5877 23502 23502 HGYAPSDLPVK 11 1 0 Unmodified _HGYAPSDLPVK_ 0 0 0 Q9Y5Q8;Q5T7U1;Q5T7U0;B7Z1V3;H7BY84;Q9NXK9;H0Y5D2 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.3091 2 592.308938 1182.60332 78951.13 0.97747 0.00057897 0.57977 0.0003434 1.5572 0.00092237 592.308675531569 596.818770873428 44.477 0.56525 44.477 44.238 44.803 0 168 46 6 0 0 0 7.9225E-05 2 24229 98.033 74.605 1 1.5485 1.6493 0 23249000 11276000 11974000 15076 2149 5745 5878 23503;23504 23503 HGYAPSDLPVK 11 1 0 Unmodified _HGYAPSDLPVK_ 0 0 0 Q9Y5Q8;Q5T7U1;Q5T7U0;B7Z1V3;H7BY84;Q9NXK9;H0Y5D2 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.3091 2 592.308938 1182.60332 79533.48 0.39935 0.00023654 0.01333 7.8958E-06 0.41268 0.00024444 592.308689175963 596.316104241077 52.846 0.45728 52.846 52.589 53.046 -3.8147E-06 136 36 6 0 0 0 0.001998 2 26176 63.216 55.102 1 2.0451 1.7277 0 1968500 769480 1199000 15077 2149 5745 5878 23505;23506 23506 HGYAPSDLPVK 11 1 0 Unmodified _HGYAPSDLPVK_ 0 0 0 Q9Y5Q8;Q5T7U1;Q5T7U0;B7Z1V3;H7BY84;Q9NXK9;H0Y5D2 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.3165 2 592.308938 1182.60332 78863.45 0.4077 0.00024148 -0.26299 -0.00015577 0.14471 8.5714E-05 592.308480887783 596.315804802965 53.007 0.47784 53.007 52.703 53.181 -3.8147E-06 130 35 5 0 0 0 0.0015954 1 25597 66.299 52.921 1 1.8828 1.5248 0 1915700 670440 1245200 15078 2149 5745 5878 23507 23507 HGYIGEFEIIDDHR 14 0 1 Unmodified _HGYIGEFEIIDDHR_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.6061 3 567.605754 1699.79543 80319.02 0.81343 0.00046171 -0.22944 -0.00013023 0.58399 0.00033148 567.605582245277 570.94162385214 88.844 0.72575 88.844 88.581 89.306 -7.6294E-06 293 47 8 0 0 0 9.2443E-05 2 48982 45.992 41.821 1 0.97855 0.84211 0 7146500 3558900 3587600 15079 831 5746 5879 23508;23509 23509 HGYIGEFEIIDDHR 14 0 1 Unmodified _HGYIGEFEIIDDHR_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.9415 3 567.605754 1699.79543 80241.65 0.36722 0.00020844 0.19159 0.00010875 0.55881 0.00031718 567.940144151679 570.941881707341 88.522 0.73849 88.522 88.265 89.004 0 257 44 9 0 0 0 0.0006859 2 47917 40.477 30.138 1 1.0159 0.84737 0 6624400 2926100 3698300 15080 831 5746 5879 23510;23511 23510 HIAVFPCK 8 1 0 Unmodified _HIAVFPCK_ 0 0 0 Q8N5A0;A0A087WUT6;O60841;B3KM86;D3DVI5 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2678 2 486.260205 970.505857 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.614 1 39.614 39.114 40.114 0 0 0 0 0.00020055 1 21025 114.54 91.016 1 15081 414 5747 5880 23512 23512 HIDFSLR 7 0 1 Unmodified _HIDFSLR_ 0 0 0 A0A024R4M0;P46781;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 444.2402 2 444.240327 886.466101 89784.86 -0.1647 -7.3168E-05 -0.015496 -6.8837E-06 -0.1802 -8.0051E-05 444.24026738714 449.244325380341 62.949 2.9015 62.949 62.039 64.94 0 893 238 6 0 0 0 0.028931 1 32302 71.141 12.895 1 0.82688 0.6978 0 29110000 16160000 12950000 15082 157 5748 5881 23513 23513 HIDFSLR 7 0 1 Unmodified _HIDFSLR_ 0 0 0 A0A024R4M0;P46781;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 444.24 2 444.240327 886.466101 90566.94 -0.11492 -5.1053E-05 -0.060326 -2.6799E-05 -0.17525 -7.7852E-05 444.240215320976 449.244328174312 62.875 3.794 62.875 62.01 65.804 0 1066 310 6 0 0 0 0.026488 1 31634 88.029 25.314 1 0.80927 0.70552 0 25253000 12600000 12653000 15083 157 5748 5881 23514 23514 HIEIFTDLSSR 11 0 1 Unmodified _HIEIFTDLSSR_ 0 0 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.3425 2 659.343509 1316.67246 73807.2 0.48907 0.00032246 -0.46311 -0.00030535 0.025953 1.7112E-05 659.342747590269 664.848309431048 78.031 1.2442 78.031 77.541 78.785 0 369 107 7 0 0 0 0.00038966 1 47252 82.287 82.287 1 0.33962 0.39543 0 61172000 49814000 11358000 15084 1476 5749 5882 23515 23515 HIEIFTDLSSR 11 0 1 Unmodified _HIEIFTDLSSR_ 0 0 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.3422 2 659.343509 1316.67246 NaN NaN NaN -0.54874 -0.00036181 NaN NaN NaN NaN 89.935 1.0972 89.935 89.319 90.416 0 0 0 0 0.0020746 1 48830 78.098 47.913 1 NaN NaN 0 10714000 10714000 0 15085 1476 5749 5882 23516 23516 HIEIFTDLSSR 11 0 1 Unmodified _HIEIFTDLSSR_ 0 0 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.3511 2 659.343509 1316.67246 NaN NaN NaN 0.36484 0.00024056 NaN NaN NaN NaN 89.995 0.96687 89.995 89.517 90.484 0 0 0 0 0.0027477 2 48938 71.614 47.459 1 NaN NaN 0 4455300 0 4455300 15086 1476 5749 5882 23517;23518 23517 HIEVEVR 7 0 1 Unmodified _HIEVEVR_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2455 2 441.245609 880.476666 91064.88 0.16463 7.2643E-05 0.14566 6.4273E-05 0.31029 0.00013692 441.24567447373 446.249675172267 26.581 0.50903 26.581 26.374 26.883 0 121 26 8 0 0 0 0.020094 1 11950 94.407 10.793 1 0.87143 0.99554 0 150890000 81984000 68906000 15087 2042 5750 5883 23519 23519 HIEVEVR 7 0 1 Unmodified _HIEVEVR_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 441.2456 2 441.245609 880.476666 90631.27 -0.15032 -6.6328E-05 0.36628 0.00016162 0.21596 9.5292E-05 441.245709029033 446.249726206581 30.289 0.98573 30.289 30.034 31.02 0 226 62 7 0 0 0 0.022039 2 12485 92.467 8.8523 1 1.1684 0.95541 0 13692000 6145000 7547200 15088 2042 5750 5883 23520;23521 23520 HIEVEVR 7 0 1 Unmodified _HIEVEVR_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 441.2455 2 441.245609 880.476666 90514.34 -0.27217 -0.00012009 0.28709 0.00012668 0.014919 6.5829E-06 441.245644090711 446.249750442978 30.023 1.2891 30.023 29.769 31.058 0 269 77 8 0 0 0 0.027012 1 11794 85.265 6.6494 1 1.2009 0.98269 0 13272000 6187100 7084800 15089 2042 5750 5883 23522 23522 HIFLIR 6 0 1 Unmodified _HIFLIR_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.753 2 399.752873 797.491193 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.401 1 62.401 61.901 62.901 0 0 0 0 0.046127 1 35819 75.94 18.866 1 15090 1972 5751 5884 23523 23523 HIIYVDNK 8 1 0 Unmodified _HIIYVDNK_ 0 0 0 Q8TAF6;O60488;B4DH39 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.2808 2 501.274367 1000.53418 NaN NaN NaN -0.68676 -0.00034426 NaN NaN NaN NaN 27.01 0.48219 27.01 26.723 27.205 -1.9073E-06 0 0 0 0.0050081 1 12399 89.296 34.746 1 NaN NaN 0 4349600 0 4349600 15091 1394 5752 5885 23524 23524 HILGFDTGDAVLNEAAQILR 20 0 1 Unmodified _HILGFDTGDAVLNEAAQILR_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.7191 3 718.383165 2152.12767 69831.51 0.73082 0.00052501 -0.43394 -0.00031173 0.29688 0.00021327 718.383225034178 722.053133405567 133.25 0.19472 133.25 133.16 133.35 -1.5259E-05 31 5 9 0 0 0 2.3564E-65 2 87211 180.1 180.1 1 1.3658 1.5281 0 88480000 36688000 51792000 15092 1793 5753 5886 23525;23526 23525 HILGFDTGDAVLNEAAQILR 20 0 1 Unmodified _HILGFDTGDAVLNEAAQILR_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.7169 3 718.383165 2152.12767 70742.34 0.79672 0.00057235 -0.26794 -0.00019249 0.52877 0.00037986 718.71766771085 722.052991014821 133.24 0.23926 133.24 133.13 133.37 0 40 6 12 0 0 0 5.0414E-32 2 89419 148.15 148.15 1 1.6064 1.8434 0 184660000 74123000 110540000 15093 1793 5753 5886 23527;23528 23527 HILGFDTGDAVLNEAAQILR 20 0 1 Unmodified _HILGFDTGDAVLNEAAQILR_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1082.0743 2 1077.07111 2152.12767 62266.89 0.3689 0.00039733 -0.29215 -0.00031467 0.076747 8.2662E-05 1077.57134821165 1082.5768896453 133.24 0.14368 133.24 133.16 133.3 0 11 3 5 0 0 0 0.0036465 1 89458 43.991 39.277 1 1.585 1.5698 0 12235000 4438500 7796300 15094 1793 5753 5886 23529 23529 HILILQNK 8 1 0 Unmodified _HILILQNK_ 0 0 0 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.8156 2 489.808377 977.6022 90750.18 0.47019 0.0002303 -0.44778 -0.00021933 0.022405 1.0974E-05 489.808365376947 493.815187886082 42.688 0.22635 42.688 42.628 42.854 0 44 18 4 0 0 0 0.0065352 1 22744 86.838 47.295 1 2.8488 2.8949 0 10295000 2427800 7866800 15095 1559 5754 5887 23530 23530 HILILQNK 8 1 0 Unmodified _HILILQNK_ 0 0 0 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.8155 2 489.808377 977.6022 88495.52 -0.010568 -5.1765E-06 0.044972 2.2028E-05 0.034404 1.6851E-05 489.808366531134 493.815373375187 48.009 0.26052 48.009 47.881 48.141 0 54 15 5 0 0 0 0.013659 2 23340 64.803 31.065 1 0.96393 0.81441 0 1976900 1008300 968610 15096 1559 5754 5887 23531;23532 23532 HILILQNK 8 1 0 Unmodified _HILILQNK_ 0 0 0 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.8155 2 489.808377 977.6022 86417.9 -0.072442 -3.5483E-05 0.4599 0.00022526 0.38746 0.00018978 489.808535756727 493.815484310288 47.635 0.22369 47.635 47.49 47.714 0 57 14 6 0 0 0 0.063522 1 22543 38.818 12.992 1 1.0061 0.85161 0 1463200 667260 795900 15097 1559 5754 5887 23533 23533 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.0303 3 645.029952 1932.06803 74555.11 0.91076 0.00058747 0.0011055 7.1308E-07 0.91187 0.00058818 645.364326711952 647.701346252588 116.65 2.52 116.65 116.03 118.55 0 1189 167 12 0 0 0 1.6008E-96 7 74757 225.09 225.09 1 1.0712 1.271 0 505970000 242960000 263010000 15098 1401 5755 5888 23534;23535;23536;23537;23538;23539;23540 23536 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 971.0482 2 967.04129 1932.06803 62651.09 0.34003 0.00032882 0.28601 0.00027658 0.62604 0.00060541 967.543083073008 971.048620208757 116.57 1.4513 116.57 116.03 117.48 0 731 100 11 0 0 0 7.1156E-127 4 74801 242.79 242.79 1 1.0648 1.2584 0 391110000 185680000 205430000 15099 1401 5755 5888 23541;23542;23543;23544 23544 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 971.5505 2 967.04129 1932.06803 62450.75 0.095713 9.2558E-05 -2.0136 -0.0019473 -1.9179 -0.0018547 967.539662256047 971.048431455439 117.8 0.33297 117.8 117.61 117.94 0 67 20 5 0 0 0 6.094E-09 2 75457 101.93 101.93 1 1.1291 1.1537 0 10483000 4725500 5757900 15100 1401 5755 5888 23545;23546 23545 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.6927 3 645.029952 1932.06803 74461.68 0.85566 0.00055193 -3.7226 -0.0024012 -2.8669 -0.0018492 645.360866966058 647.701473800985 119.77 0.18588 119.77 119.7 119.88 0 43 12 5 0 0 0 0.0060986 1 77111 25.454 19.794 1 1.1942 1.2004 0 5217300 2781700 2435600 15101 1401 5755 5888 23547 23547 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 971.049 2 967.04129 1932.06803 62544.95 0.57537 0.00055641 -0.0021692 -2.0977E-06 0.5732 0.00055431 967.542718129874 971.048421425256 115.6 1.4775 115.6 115.19 116.67 -7.6294E-06 683 95 12 0 0 0 3.9732E-27 4 75821 150.49 150.49 1 1.0505 1.2376 0 545950000 267930000 278020000 15102 1401 5755 5888 23548;23549;23550;23551 23550 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.7018 3 645.029952 1932.06803 75039.76 0.94461 0.0006093 -0.19703 -0.00012709 0.74758 0.00048221 645.364275080645 647.701257610762 115.63 1.8611 115.63 115.18 117.04 0 966 118 12 0 0 0 8.8182E-128 5 75855 222.16 222.16 1 1.0704 1.2625 0 764910000 370400000 394510000 15103 1401 5755 5888 23552;23553;23554;23555;23556 23554 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 971.5509 2 967.04129 1932.06803 62366.93 0.40428 0.00039096 -0.89289 -0.00086346 -0.4886 -0.0004725 967.542495466585 971.549817398693 116.76 0.16885 116.76 116.66 116.83 0 43 10 7 0 0 0 1.4582E-12 1 76475 116.23 116.23 1 0.98958 1.023 0 11406000 6565700 4839900 15104 1401 5755 5888 23557 23557 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.7029 3 645.029952 1932.06803 78397.16 0.73742 0.00047566 -2.5829 -0.0016661 -1.8455 -0.0011904 645.361199960151 648.032746620352 118.95 0.36964 118.95 118.81 119.18 -7.6294E-06 68 23 4 0 0 0 1.371E-09 1 78284 75.316 64.849 1 1.5755 1.5699 0 6385500 3636800 2748600 15105 1401 5755 5888 23558 23558 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.0364 3 645.029952 1932.06803 NaN NaN NaN -0.13904 -8.9687E-05 NaN NaN NaN NaN 117.6 0.77134 117.6 117.41 118.18 7.6294E-06 0 0 0 2.2306E-10 1 77215 104.41 94.665 1 NaN NaN 0 5562700 0 5562700 15106 1401 5755 5888 23559 23559 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 971.479 2 967.04129 1932.06803 70097.88 0.65721 0.00063555 -0.79059 -0.00076454 -0.13338 -0.00012898 967.541920365826 971.047859694342 117.83 0.34258 117.83 117.67 118.01 0 47 24 4 0 0 0 0.031932 1 77419 35.664 35.664 1 1.3207 1.3898 0 4344800 2112200 2232600 15107 1401 5755 5888 23560 23560 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 967.5433 2 967.04129 1932.06803 62109.19 0.014204 1.3736E-05 0.47163 0.00045609 0.48584 0.00046982 967.543188406715 971.550170350313 127.11 1.5335 127.11 126.68 128.21 7.6294E-06 495 62 12 0 0 0 9.4936E-13 4 76344 142.57 142.57 1 1.1812 1.037 0 218550000 100290000 118270000 15108 1401 5755 5888 23561;23562;23563;23564 23562 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.7026 3 645.029952 1932.06803 74121.98 0.68557 0.00044221 -0.19445 -0.00012542 0.49112 0.00031679 645.364374606917 647.701319630121 127.05 1.3799 127.05 126.63 128.01 0 558 56 14 0 0 0 6.7335E-69 4 76369 176.56 176.56 1 1.1385 1.008 0 315580000 148720000 166860000 15109 1401 5755 5888 23565;23566;23567;23568 23565 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 967.5427 2 967.04129 1932.06803 62122.25 0.41079 0.00039725 0.47152 0.00045598 0.88231 0.00085323 967.042302077056 971.048890174508 128.02 0.94717 128.02 127.86 128.8 0 119 39 7 0 0 0 0.020648 1 77513 37.968 37.968 1 1.331 1.0325 0 14092000 7029000 7063200 15110 1401 5755 5888 23569 23569 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.037 3 645.029952 1932.06803 74286.68 1.0941 0.00070573 0.07288 4.701E-05 1.167 0.00075274 645.029886945145 647.701352066939 128.37 1.6892 128.37 127.86 129.55 0 268 74 5 0 0 0 1.6345E-09 3 77526 77.372 77.372 1 1.1235 0.89339 0 19343000 9248000 10095000 15111 1401 5755 5888 23570;23571;23572 23570 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 971.0504 2 967.04129 1932.06803 NaN NaN NaN 0.13038 0.00012608 NaN NaN NaN NaN 128.36 0.71027 128.36 128.26 128.97 0 0 0 0 0.006072 1 77527 48.948 24.962 1 NaN NaN 0 6113800 0 6113800 15112 1401 5755 5888 23573 23573 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.7017 3 645.029952 1932.06803 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.09 1 129.09 128.59 129.59 0 0 0 0 0.00099385 1 78056 71.344 59.059 1 15113 1401 5755 5888 23574 23574 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.7019 3 645.029952 1932.06803 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.28 1 129.28 128.78 129.78 0 0 0 0 9.0902E-12 1 78197 108.06 98.006 1 15114 1401 5755 5888 23575 23575 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 967.5435 2 967.04129 1932.06803 62005.45 0.089724 8.6767E-05 0.40699 0.00039357 0.49671 0.00048034 967.543210379005 971.048805412844 126.83 1.2308 126.83 126.42 127.65 -7.6294E-06 359 53 11 0 0 0 6.6107E-18 2 75285 155.98 155.98 1 1.1605 1.0032 0 224600000 103550000 121040000 15115 1401 5755 5888 23576;23577 23577 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.0357 3 645.029952 1932.06803 74813.33 0.64788 0.00041791 -0.084779 -5.4685E-05 0.56311 0.00036322 645.364419137609 647.701390275956 126.94 1.3776 126.94 126.3 127.68 0 487 59 13 0 0 0 2.9694E-82 1 75791 165.34 165.34 1 1.1166 0.97008 0 309060000 143980000 165090000 15116 1401 5755 5888 23578 23578 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.7032 3 645.029952 1932.06803 75335.54 0.80698 0.00052053 0.10859 7.0045E-05 0.91557 0.00059057 645.029926015945 647.701437615697 127.93 1.0502 127.93 127.54 128.59 7.6294E-06 149 43 8 0 0 0 2.2604E-05 2 76483 46.156 46.156 1 1.1761 0.95608 0 13052000 6277900 6774500 15117 1401 5755 5888 23579;23580 23580 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.0309 3 645.029952 1932.06803 75468.71 0.9199 0.00059336 -0.033823 -2.1817E-05 0.88608 0.00057155 645.364072373342 647.701492615124 128.86 0.6413 128.86 128.52 129.16 0 58 25 5 0 0 0 2.3233E-05 1 77076 65.467 65.467 1 0.56841 0.44728 0 3861000 2151200 1709800 15118 1401 5755 5888 23581 23581 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 971.5499 2 967.04129 1932.06803 NaN NaN NaN -0.11602 -0.00011219 NaN NaN NaN NaN 127.27 0.49376 127.27 127.19 127.68 0 0 0 0 3.1021E-36 2 75792 152.99 130.11 1 NaN NaN 0 44603000 0 44603000 15119 1401 5755 5888 23582;23583 23582 HILLAVANDEELNQLLK 17 1 0 Unmodified _HILLAVANDEELNQLLK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.9923 2 967.04129 1932.06803 62745.07 0.29421 0.00028451 0.63963 0.00061855 0.93384 0.00090307 967.041841116496 971.048828407535 128.14 0.60028 128.14 127.92 128.52 0 81 25 5 0 0 0 3.7306E-05 1 76397 66.267 66.267 1 0.98918 0.81265 0 9558500 4088300 5470200 15120 1401 5755 5888 23584 23584 HIMGQNVADYMR 12 0 1 2 Oxidation (M) _HIM(ox)GQNVADYM(ox)R_ HIM(1)GQNVADYM(1)R HIM(101.39)GQNVADYM(101.39)R 0 2 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.8334 2 733.829385 1465.64422 69127.88 0.38958 0.00028588 -0.28801 -0.00021135 0.10157 7.4532E-05 733.829610385702 738.833642068234 24.625 0.7935 24.625 24.393 25.187 0 171 36 10 0 0 0 2.902E-05 2 10248 101.39 88.848 1 2.9458 3.4368 0 195240000 52273000 142970000 15121 653 5756 5889 23585;23586 23585 505;506 HIMGQNVADYMR 12 0 1 2 Oxidation (M) _HIM(ox)GQNVADYM(ox)R_ HIM(1)GQNVADYM(1)R HIM(56.2)GQNVADYM(56.2)R 0 2 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.8913 3 489.555349 1465.64422 85260.02 -0.053536 -2.6209E-05 0.023962 1.1731E-05 -0.029574 -1.4478E-05 489.555430110432 492.891528535223 24.582 0.65624 24.582 24.393 25.05 0 104 30 6 0 0 0 0.0014859 2 10301 56.205 51.287 1 2.9868 3.3195 0 73646000 19762000 53885000 15122 653 5756 5889 23587;23588 23587 505;506 HIMGQNVADYMR 12 0 1 2 Oxidation (M) _HIM(ox)GQNVADYM(ox)R_ HIM(1)GQNVADYM(1)R HIM(42.8)GQNVADYM(42.8)R 0 2 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.8296 2 733.829385 1465.64422 NaN NaN NaN -0.39408 -0.00028918 NaN NaN NaN NaN 27.534 0.87204 27.534 27.309 28.181 0 0 0 0 0.0081306 1 10699 42.802 38.553 1 NaN NaN 0 4238500 4238500 0 15123 653 5756 5889 23589 23589 505;506 HIMGQNVADYMR 12 0 1 Oxidation (M) _HIM(ox)GQNVADYMR_ HIM(1)GQNVADYMR HIM(37.14)GQNVADYM(-37.14)R 0 1 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.8398 2 725.831928 1449.6493 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.405 1 43.405 42.905 43.905 0 0 0 0 0.0039737 1 23553 58.592 48.796 2 15124 653 5756 5890 23590 23590 505;506 HINDSAPEVR 10 0 1 Unmodified _HINDSAPEVR_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.2902 2 569.285994 1136.55744 81860.93 0.73923 0.00042083 -0.083522 -4.7548E-05 0.6557 0.00037328 569.286354128049 574.289996668576 21.584 0.2658 21.584 21.465 21.73 0 51 15 5 0 0 0 0.0032667 1 7879 65.305 55.394 1 1.006 1.0213 0 7587600 3166900 4420700 15125 1725 5757 5891 23591 23591 HINDSAPEVR 10 0 1 Unmodified _HINDSAPEVR_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.7981 2 569.285994 1136.55744 77812.74 0.52125 0.00029674 -1.7225 -0.00098058 -1.2012 -0.00068384 569.284434485364 574.289813619175 21.098 0.57899 21.098 20.829 21.408 0 50 21 4 0 0 0 0.053072 1 7332 58.433 58.433 1 0.69613 0.70393 0 9692100 6914600 2777400 15126 1725 5757 5891 23592 23592 HINMDGTINVDDFK 14 1 0 Oxidation (M) _HINM(ox)DGTINVDDFK_ HINM(1)DGTINVDDFK HINM(45.65)DGTINVDDFK 0 1 0 O75643;A4FU77;Q9H8B9;Q5ZF01 O75643 O75643 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.8846 2 817.877587 1633.74062 70133.66 0.4385 0.00035864 -0.24045 -0.00019666 0.19806 0.00016199 818.37921058315 821.884411119378 64.787 0.48625 64.787 64.473 64.959 0 134 44 4 0 0 0 0.0020939 1 37154 45.653 40.712 1 1.3295 1.3877 0 12207000 4845200 7362000 15127 1411 5758 5892 23593 23593 1091 HINMDGTINVDDFK 14 1 0 Oxidation (M) _HINM(ox)DGTINVDDFK_ HINM(1)DGTINVDDFK HINM(72.29)DGTINVDDFK 0 1 0 O75643;A4FU77;Q9H8B9;Q5ZF01 O75643 O75643 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.8848 2 817.877587 1633.74062 68033.33 0.61597 0.00050379 -0.099503 -8.1381E-05 0.51647 0.00042241 817.87738780609 821.884838256448 62.531 0.63578 62.531 62.298 62.934 3.8147E-06 150 58 4 0 0 0 8.6845E-05 2 36628 72.29 65.986 1 1.573 1.5702 0 14943000 6959700 7983200 15128 1411 5758 5892 23594;23595 23594 1091 HINPVAASLIQK 12 1 0 Unmodified _HINPVAASLIQK_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3;I3L2H5;I3L309 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.8877 2 645.880062 1289.74557 77615.63 0.65888 0.00042556 -0.046937 -3.0315E-05 0.61194 0.00039524 645.880039765561 649.887148267625 64.329 0.9009 64.329 63.768 64.668 0 296 81 5 0 0 0 0.00020734 2 36909 80.245 50.772 1 0.95271 0.97027 0 17958000 9544500 8414000 15129 1604 5759 5893 23596;23597 23597 HINPVAASLIQK 12 1 0 Unmodified _HINPVAASLIQK_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3;I3L2H5;I3L309 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.8807 2 645.880062 1289.74557 76745.56 0.56765 0.00036663 0.21311 0.00013764 0.78076 0.00050428 645.880240647992 649.887218936835 60.179 0.65416 60.179 59.792 60.446 0 165 42 6 0 0 0 1.0321E-08 2 35058 123.01 102.14 1 1.0021 1.0402 0 18847000 10116000 8730900 15130 1604 5759 5893 23598;23599 23599 HITSEADSDPGNPVELCK 18 1 0 Unmodified _HITSEADSDPGNPVELCK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.6414 3 656.970433 1967.88947 76104.98 0.72997 0.00047957 0.331 0.00021746 1.061 0.00069703 656.970210079475 659.642058720237 56.878 0.44859 56.878 56.669 57.118 0 120 30 7 0 0 0 0.031374 1 28700 17.824 17.824 1 2.7648 2.3034 0 1769300 471070 1298200 15131 1795 5760 5894 23600 23600 HITVVHK 7 1 0 Unmodified _HITVVHK_ 0 0 0 Q2TB10;B7Z4V7 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.2529 2 417.253237 832.491922 95577.52 -0.025049 -1.0452E-05 -0.26605 -0.00011101 -0.2911 -0.00012146 417.253063035977 421.260224260727 17.443 0.28706 17.443 17.307 17.594 0 28 11 4 0 0 0 0.014567 1 4623 99.919 61.549 1 1.1381 1.1402 0 7633400 3370500 4262900 15132 1777 5761 5895 23601 23601 HITVVHK 7 1 0 Unmodified _HITVVHK_ 0 0 0 Q2TB10;B7Z4V7 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.2536 2 417.253237 832.491922 93090.07 -0.17416 -7.267E-05 0.32718 0.00013651 0.15301 6.3844E-05 417.253246914509 421.260346670366 15.452 0.41365 15.452 15.278 15.692 0 99 26 6 0 0 0 0.018704 1 3081 95.793 61.088 1 0.9991 0.99901 0 6657900 2944000 3713900 15133 1777 5761 5895 23602 23602 HIVEWNVQTCK 11 1 0 Unmodified _HIVEWNVQTCK_ 0 0 0 Q15061;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3574 2 707.350811 1412.68707 73392.78 0.48929 0.0003461 -0.41304 -0.00029217 0.076251 5.3936E-05 707.350632033746 711.859452060702 47.096 0.42751 47.096 46.894 47.321 0 147 32 7 0 0 0 0.0003428 3 26054 85.963 82.707 1 0.63918 0.67223 0 35025000 19599000 15426000 15134 1752 5762 5896 23603;23604;23605 23605 HIVEWNVQTCK 11 1 0 Unmodified _HIVEWNVQTCK_ 0 0 0 Q15061;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 474.5743 3 471.902966 1412.68707 89582.01 0.25865 0.00012206 -0.48266 -0.00022777 -0.22402 -0.00010571 471.902637581033 474.574336025712 55.954 0.70546 55.954 55.74 56.445 0 156 44 6 0 0 0 0.016492 1 28096 25.701 25.055 1 1.6024 1.3542 0 1993100 846820 1146300 15135 1752 5762 5896 23606 23606 HIVEWNVQTCK 11 1 0 Unmodified _HIVEWNVQTCK_ 0 0 0 Q15061;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.3578 2 707.350811 1412.68707 71030.46 0.56652 0.00040073 -0.4513 -0.00031923 0.11522 8.1498E-05 707.350577107394 711.357976784933 56.141 1.1524 56.141 55.579 56.731 0 306 78 8 0 0 0 3.0366E-05 1 27548 100.88 93.818 1 1.1949 0.97311 0 6810400 3013900 3796600 15136 1752 5762 5896 23607 23607 HIYYITGETK 10 1 0 Unmodified _HIYYITGETK_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0 K9JA46 K9JA46 EL52;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8239 2 612.816596 1223.61864 80106.21 0.15456 9.4716E-05 1.0169 0.00062318 1.1715 0.00071789 613.319458924889 616.824189989771 38.096 0.45672 38.096 37.896 38.353 0 85 35 5 0 0 0 1.2687E-08 1 19904 123.35 102.65 1 2.667 2.8229 0 23555000 6581300 16973000 15137 1348 5763 5897 23608 23608 HIYYITGETK 10 1 0 Unmodified _HIYYITGETK_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0 K9JA46 K9JA46 EL52;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.8242 2 612.816596 1223.61864 79146.72 0.73061 0.00044773 0.25164 0.00015421 0.98225 0.00060194 612.816990734326 616.823591735262 44.908 0.76252 44.908 44.593 45.355 0 144 55 4 0 0 0 0.0088235 1 20835 55.549 55.549 1 1.8602 1.5652 0 1489400 538200 951240 15138 1348 5763 5897 23609 23609 HLAAVEER 8 0 1 Unmodified _HLAAVEER_ 0 0 0 Q58EY4;Q92922;B4DYQ1;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.7479 2 462.748516 923.482479 87030.67 0.32144 0.00014875 0.01175 5.4371E-06 0.33319 0.00015418 462.74815587267 467.752482823474 19.258 0.35454 19.258 19.084 19.439 0 83 20 6 0 0 0 0.0092222 1 5888 75.243 0 1 0.74183 0.77045 0 37896000 21920000 15977000 15139 1798;321 5764 5898 23610 23610 HLAAVEER 8 0 1 Unmodified _HLAAVEER_ 0 0 0 Q58EY4;Q92922;B4DYQ1;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.7522 2 462.748516 923.482479 NaN NaN NaN -0.009897 -4.5798E-06 NaN NaN NaN NaN 19.149 0.27645 19.149 18.975 19.252 0 0 0 0 0.0021864 1 5600 109.01 19.87 1 NaN NaN 0 23646000 0 23646000 15140 1798;321 5764 5898 23611 23611 HLAAVEER 8 0 1 Unmodified _HLAAVEER_ 0 0 0 Q58EY4;Q92922;B4DYQ1;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 462.7486 2 462.748516 923.482479 84296.21 -0.19989 -9.2501E-05 0.26496 0.00012261 0.065067 3.011E-05 462.748600013348 467.752676042235 20.133 0.55663 20.133 19.817 20.373 0 84 24 7 0 0 0 0.029249 1 5630 52.716 0 1 1.3926 1.1862 0 8994500 3863600 5130900 15141 1798;321 5764 5898 23612 23612 HLAFGGR 7 0 1 Unmodified _HLAFGGR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.2088 2 379.20883 756.403107 98415.88 0.34845 0.00013214 0.041482 1.573E-05 0.38994 0.00014787 379.208717259339 384.21298640673 24.25 0.58359 24.25 24.125 24.708 0 84 23 7 0 0 0 0.019549 1 10030 94.95 61.293 1 0.94048 1.0583 0 96258000 44281000 51977000 15142 809 5765 5899 23613 23613 HLAFGGR 7 0 1 Unmodified _HLAFGGR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.2088 2 379.20883 756.403107 96984.94 0.028308 1.0735E-05 0.15155 5.7468E-05 0.17985 6.8202E-05 379.208823287633 384.212938422303 23.439 0.54536 23.439 23.224 23.77 0 94 23 6 0 0 0 0.010895 1 9255 109.88 76.223 1 0.81711 0.94586 0 67534000 37296000 30238000 15143 809 5765 5899 23614 23614 HLAFGGR 7 0 1 Unmodified _HLAFGGR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 379.2088 2 379.20883 756.403107 98032.6 0.012327 4.6745E-06 0.32958 0.00012498 0.34191 0.00012966 379.208754767548 384.213012670108 25.588 0.8418 25.588 25.396 26.238 0 98 34 5 0 0 0 0.042429 1 9441 58.551 34.928 1 1.205 0.99798 0 11197000 4971100 6226000 15144 809 5765 5899 23615 23615 HLANVTQLVK 10 1 0 Unmodified _HLANVTQLVK_ 0 0 0 P14373;Q59EC6;A0A0G2JIZ4 P14373 P14373 TRIM27 Zinc finger protein RFP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.8358 2 561.835123 1121.65569 84087.61 0.40553 0.00022784 -0.010824 -6.0816E-06 0.39471 0.00022176 561.835293031883 566.343954242898 53.965 0.40503 53.965 53.764 54.169 0 93 32 4 0 0 0 0.011074 1 30230 52.49 19.094 1 1.3192 1.3621 0 14645000 8172300 6473200 15145 1480 5766 5900 23616 23616 HLAPPPLLSPLLPSIKPTVR 20 1 1 Unmodified _HLAPPPLLSPLLPSIKPTVR_ 0 0 1 Q14676;B4DYH4;H0Y6Z8 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.1097 3 716.108537 2145.30378 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.41 1 131.41 130.91 131.91 0 0 0 0 0.0089134 1 85759 41.257 36.279 1 15146 1738 5767 5901 23617 23617 HLCEPGADGAETFADGVPR 19 0 1 Unmodified _HLCEPGADGAETFADGVPR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.307 3 666.970656 1997.89014 72992.29 0.68595 0.00045751 -0.048717 -3.2493E-05 0.63724 0.00042502 666.970583871177 670.307133739043 70.925 0.88828 70.925 70.51 71.399 0 261 73 5 0 0 0 2.0734E-12 2 41389 86.005 86.005 1 0.67589 0.69012 0 26712000 14401000 12311000 15147 515 5768 5902 23618;23619 23618 HLCEPGADGAETFADGVPR 19 0 1 Unmodified _HLCEPGADGAETFADGVPR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 999.9547 2 999.952346 1997.89014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.783 1 70.783 70.283 71.283 0 0 0 0 0.0046354 1 41229 49.423 44.108 1 15148 515 5768 5902 23620 23620 HLCEPGADGAETFADGVPR 19 0 1 Unmodified _HLCEPGADGAETFADGVPR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1004.9582 2 999.952346 1997.89014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.929 1 70.929 70.429 71.429 0 0 0 0 0.041645 1 41331 36.284 27.555 1 15149 515 5768 5902 23621 23621 HLCEPGADGAETFADGVPR 19 0 1 Unmodified _HLCEPGADGAETFADGVPR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.9703 3 666.970656 1997.89014 72205.43 0.60753 0.00040521 0.01415 9.4377E-06 0.62168 0.00041464 667.304554005344 670.307388910179 69.122 0.71651 69.122 68.841 69.557 0 296 59 8 0 0 0 4.6976E-23 1 41081 131.82 130.09 1 0.68005 0.74312 0 36844000 21436000 15408000 15150 515 5768 5902 23622 23622 HLCEPGADGAETFADGVPR 19 0 1 Unmodified _HLCEPGADGAETFADGVPR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1004.9576 2 999.952346 1997.89014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.055 1 69.055 68.555 69.555 7.6294E-06 0 0 0 0.010229 1 41072 43.991 38.498 1 15151 515 5768 5902 23623 23623 HLCEPGADGAETFADGVPR 19 0 1 Unmodified _HLCEPGADGAETFADGVPR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.9705 3 666.970656 1997.89014 73327.84 0.43672 0.00029128 0.2152 0.00014353 0.65192 0.00043481 667.304538080468 670.307401413645 80.58 0.79205 80.58 80.287 81.079 0 293 55 8 0 0 0 2.9684E-06 2 43527 52.814 52.814 1 2.2415 1.9189 0 8667300 2854200 5813100 15152 515 5768 5902 23624;23625 23625 HLCEPGADGAETFADGVPR 19 0 1 Unmodified _HLCEPGADGAETFADGVPR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.305 3 666.970656 1997.89014 74080.83 0.59823 0.000399 0.090127 6.0112E-05 0.68836 0.00045911 667.304643870151 670.641029861774 80.721 0.80611 80.721 80.476 81.282 -7.6294E-06 312 57 9 0 0 0 7.0687E-06 2 42853 41.513 41.513 1 2.139 1.7824 0 6870600 2224700 4645900 15153 515 5768 5902 23626;23627 23627 HLCEPGADGAETFADGVPR 19 0 1 Unmodified _HLCEPGADGAETFADGVPR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1004.9557 2 999.952346 1997.89014 60657.33 0.23792 0.00023791 0.12971 0.0001297 0.36763 0.00036761 999.951560484019 1004.95630144246 80.703 0.50423 80.703 80.549 81.053 0 112 37 7 0 0 0 0.009348 1 42747 26.969 26.969 1 2.2641 2.0384 0 2242500 786430 1456100 15154 515 5768 5902 23628 23628 HLCFQLVSPTGTAVSTLSYISR 22 0 1 Unmodified _HLCFQLVSPTGTAVSTLSYISR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.7602 3 813.089653 2436.24713 67104.17 0.698 0.00056754 0.22125 0.00017989 0.91925 0.00074743 813.424562675618 816.760249711311 130.4 0.79155 130.4 130.13 130.92 0 197 37 9 0 0 0 0.0011606 2 78928 28.299 25.155 1 2.6498 2.2188 0 10206000 2486400 7719600 15155 1945 5769 5903 23629;23630 23629 HLCFQLVSPTGTAVSTLSYISR 22 0 1 Unmodified _HLCFQLVSPTGTAVSTLSYISR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 816.7608 3 813.089653 2436.24713 67211.3 1.08 0.00087815 -0.15726 -0.00012787 0.92275 0.00075028 813.424220438379 816.760040371246 130.12 0.53954 130.12 129.86 130.4 0 87 21 7 0 0 0 1.486E-07 1 77867 55.128 55.128 1 1.9167 1.5459 0 11238000 2658500 8579400 15156 1945 5769 5903 23631 23631 HLCQQLQAEQAAAEK 15 1 0 Unmodified _HLCQQLQAEQAAAEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.4312 2 862.92286 1723.83117 NaN NaN NaN -0.23878 -0.00020605 NaN NaN NaN NaN 34.264 0.25521 34.264 34.118 34.374 0 0 0 0 0.010813 1 17075 50.354 24.695 1 NaN NaN 0 6615400 0 6615400 15157 186;1747 5770 5904 23632 23632 HLCQQLQAEQAAAEK 15 1 0 Unmodified _HLCQQLQAEQAAAEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.9299 2 862.92286 1723.83117 67090.66 0.90478 0.00078076 0.29497 0.00025453 1.1998 0.0010353 863.424917500317 866.930369322429 32.528 0.32791 32.528 32.362 32.69 0 82 30 4 0 0 0 7.1546E-05 2 16135 84.169 69.293 1 0.94101 0.95602 0 12722000 5897300 6824700 15158 186;1747 5770 5904 23633;23634 23634 HLCQQLQAEQAAAEK 15 1 0 Unmodified _HLCQQLQAEQAAAEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 866.9289 2 862.92286 1723.83117 66624.19 0.15512 0.00013385 0.020864 1.8004E-05 0.17598 0.00015186 862.922727114677 867.43140628794 39.235 0.62947 39.235 39.018 39.647 3.8147E-06 206 47 7 0 0 0 0.00022504 2 17314 71.558 71.558 1 1.6648 1.3219 0 4018400 1460000 2558300 15159 186;1747 5770 5904 23635;23636 23635 HLDDINFDVR 10 0 1 Unmodified _HLDDINFDVR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.3113 2 622.306926 1242.5993 NaN NaN NaN 0.37735 0.00023483 NaN NaN NaN NaN 70.531 0.80399 70.531 70.259 71.063 0 0 0 0 0.00017917 1 40994 92.838 81.348 1 NaN NaN 0 8933700 0 8933700 15160 1412 5771 5905 23637 23637 HLDDINFDVR 10 0 1 Unmodified _HLDDINFDVR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3113 2 622.306926 1242.5993 79074.59 0.67481 0.00041994 0.023184 1.4427E-05 0.698 0.00043437 622.307047802094 627.311298721848 68.386 0.52349 68.386 68.044 68.568 0 118 40 4 0 0 0 0.0025392 1 40519 68.626 44.404 1 0.78398 0.82597 0 23261000 11850000 11411000 15161 1412 5771 5905 23638 23638 HLDDINFDVR 10 0 1 Unmodified _HLDDINFDVR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.3116 2 622.306926 1242.5993 79017.95 0.47235 0.00029395 0.74682 0.00046475 1.2192 0.0007587 622.307215541895 627.311696646078 79.483 0.78475 79.483 79.132 79.917 0 167 48 5 0 0 0 0.0050236 2 42720 66.692 52.025 1 1.4346 1.1997 0 3791600 1620000 2171700 15162 1412 5771 5905 23639;23640 23639 HLDDINFDVR 10 0 1 Unmodified _HLDDINFDVR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.3126 2 622.306926 1242.5993 78571.89 0.42757 0.00026608 0.37731 0.00023481 0.80488 0.00050088 622.307099617693 627.311310626533 79.561 0.83281 79.561 79.26 80.093 0 206 51 6 0 0 0 0.011842 1 41916 51.445 38.918 1 1.4553 1.2382 0 3149100 1050100 2099000 15163 1412 5771 5905 23641 23641 HLDDLSK 7 1 0 Unmodified _HLDDLSK_ 0 0 0 Q15269;A0A0B4J2E5;A0A096LPI6 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.2239 2 414.216517 826.418482 90849.91 -0.036757 -1.5225E-05 0.49409 0.00020466 0.45733 0.00018943 414.216298593835 418.224078631437 19.044 0.4992 19.044 18.88 19.379 0 99 32 5 0 0 0 0.026763 1 5795 87.754 43.377 1 0.85632 0.88768 0 12611000 6072400 6538900 15164 1756 5772 5906 23642 23642 HLDGEEDGSSDQSQASGTTGGR 22 0 1 Unmodified _HLDGEEDGSSDQSQASGTTGGR_ 0 0 0 Q5H909;A0A024R9Y7;Q9UNF1;Q5H907 Q5H909 Q5H909 MAGED2 Melanoma-associated antigen D2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.9748 3 730.975851 2189.90572 72613.58 0.52127 0.00038103 0.19738 0.00014428 0.71865 0.00052531 731.310630745086 734.646677398582 15.634 0.2698 15.634 15.458 15.728 0 77 20 6 0 0 0 0.019558 1 3208 18.772 18.772 1 1.6501 1.7788 0 2900000 973210 1926800 15165 292 5773 5907 23643 23643 HLDGEEDGSSDQSQASGTTGGR 22 0 1 Unmodified _HLDGEEDGSSDQSQASGTTGGR_ 0 0 0 Q5H909;A0A024R9Y7;Q9UNF1;Q5H907 Q5H909 Q5H909 MAGED2 Melanoma-associated antigen D2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.9754 3 730.975851 2189.90572 71666.5 0.39905 0.0002917 0.12952 9.4677E-05 0.52857 0.00038637 730.975575960439 734.312314822108 16.951 0.22541 16.951 16.826 17.052 0 93 16 8 0 0 0 0.031006 2 3502 15.237 15.237 1 0.67566 0.59835 0 1221700 669710 551960 15166 292 5773 5907 23644;23645 23644 HLDPSLANYLVQK 13 1 0 Unmodified _HLDPSLANYLVQK_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.4073 2 749.40664 1496.79873 70443.73 0.79773 0.00059782 -0.13993 -0.00010486 0.6578 0.00049296 749.406337171869 753.413811932981 86.97 0.60125 86.97 86.697 87.298 0 189 46 6 0 0 0 1.1022E-18 3 52434 141.08 141.08 1 1.0163 1.0929 0 38748000 17642000 21106000 15167 1385 5774 5908 23646;23647;23648 23647 HLDPSLANYLVQK 13 1 0 Unmodified _HLDPSLANYLVQK_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.4142 2 749.40664 1496.79873 69574.71 0.69608 0.00052165 1.0399 0.00077928 1.7359 0.0013009 749.406379086239 753.413729243226 85.594 0.74142 85.594 85.179 85.92 0 301 56 8 0 0 0 1.1022E-18 2 52526 141.08 121.32 1 1.0043 1.1323 0 61575000 32510000 29065000 15168 1385 5774 5908 23649;23650 23649 HLDPSLANYLVQK 13 1 0 Unmodified _HLDPSLANYLVQK_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.6125 3 499.940186 1496.79873 87817.03 0.36231 0.00018113 -0.022114 -1.1056E-05 0.3402 0.00017008 500.273994360837 502.61195847121 98.725 0.63576 98.725 98.504 99.14 0 132 38 7 0 0 0 0.021243 1 55611 15.798 15.798 1 1.4517 1.2249 0 2104200 840930 1263300 15169 1385 5774 5908 23651 23651 HLDPSLANYLVQK 13 1 0 Unmodified _HLDPSLANYLVQK_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 753.4134 2 749.40664 1496.79873 68232.68 0.78318 0.00058692 -0.19536 -0.0001464 0.58782 0.00044052 749.406090605058 753.41349941115 98.742 1.0318 98.742 98.405 99.437 -7.6294E-06 325 62 8 0 0 0 0.00014408 3 55692 82.954 76.294 1 1.7357 1.3671 0 10971000 4030800 6939800 15170 1385 5774 5908 23652;23653;23654 23653 HLDPSLANYLVQK 13 1 0 Unmodified _HLDPSLANYLVQK_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 502.9462 3 499.940186 1496.79873 88726.61 0.25078 0.00012538 -0.030746 -1.5371E-05 0.22004 0.00011001 500.274257650217 502.946007827072 98.493 0.41378 98.493 98.343 98.757 0 60 25 4 0 0 0 0.00046369 1 54739 40.516 35.714 1 0.89566 0.7415 0 1663900 1078000 585850 15171 1385 5774 5908 23655 23655 HLDPSLANYLVQK 13 1 0 Unmodified _HLDPSLANYLVQK_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.4143 2 749.40664 1496.79873 NaN NaN NaN 0.19868 0.00014889 NaN NaN NaN NaN 98.507 1.2832 98.507 98.114 99.398 0 0 0 0 4.4929E-29 1 54809 147.62 117.86 1 NaN NaN 0 7292900 0 7292900 15172 1385 5774 5908 23656 23656 HLDQIIPR 8 0 1 Unmodified _HLDQIIPR_ 0 0 0 E1NZA1;Q92616;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.2881 2 496.287808 990.561064 86572.98 0.33222 0.00016488 -0.26316 -0.0001306 0.069063 3.4275E-05 496.287634849815 501.291813183103 49.172 0.48336 49.172 48.904 49.387 0 111 36 4 0 0 0 0.0056635 2 26920 89.752 60.603 1 1.6443 1.7115 0 21882000 8070000 13812000 15173 1205 5775 5909 23657;23658 23657 HLDQIIPR 8 0 1 Unmodified _HLDQIIPR_ 0 0 0 E1NZA1;Q92616;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2921 2 496.287808 990.561064 87938.52 0.31301 0.00015534 -0.42877 -0.00021279 -0.11576 -5.745E-05 496.287676393083 501.29144449357 46.521 0.59462 46.521 46.173 46.768 0 116 46 5 0 0 0 0.012954 1 25626 66.429 39.827 1 1.9751 2.1113 0 24881000 10687000 14194000 15174 1205 5775 5909 23659 23659 HLEAILTK 8 1 0 Unmodified _HLEAILTK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.7789 2 462.779285 923.544017 90391.23 0.26739 0.00012374 0.017192 7.9559E-06 0.28458 0.0001317 462.779258897714 466.786339195853 40.52 0.35696 40.52 40.37 40.727 0 85 32 4 0 0 0 0.024382 1 21234 55.902 33.942 1 0.85732 0.90724 0 16237000 8101000 8136000 15175 897 5776 5910 23660 23660 HLEAILTK 8 1 0 Unmodified _HLEAILTK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.7789 2 462.779285 923.544017 89571.66 0.24936 0.0001154 0.30719 0.00014216 0.55654 0.00025756 462.779400384736 466.786406884252 38.593 0.78573 38.593 38.353 39.139 0 193 67 5 0 0 0 0.0077392 2 20227 81.642 46.891 1 0.78247 0.80726 0 32720000 18407000 14313000 15176 897 5776 5910 23661;23662 23662 HLEAILTK 8 1 0 Unmodified _HLEAILTK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 462.7794 2 462.779285 923.544017 89747.14 0.22633 0.00010474 -0.10987 -5.0847E-05 0.11646 5.3895E-05 462.779209391021 466.786276485388 45.297 1.4467 45.297 44.902 46.349 0 376 109 5 0 0 0 0.014674 1 21645 62.464 29.854 1 1.2598 0.98149 0 3328300 1559200 1769100 15177 897 5776 5910 23663 23663 HLEAILTK 8 1 0 Unmodified _HLEAILTK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.7861 2 462.779285 923.544017 89682.75 0.40249 0.00018627 -0.24929 -0.00011537 0.1532 7.0898E-05 462.779122859412 466.786138550301 44.678 1.6047 44.678 44.324 45.929 0 296 108 4 0 0 0 0.027047 1 20613 54.157 38.013 1 1.2329 1.0009 0 2863500 1241700 1621800 15178 897 5776 5910 23664 23664 HLEAQGTSLPK 11 1 0 Unmodified _HLEAQGTSLPK_ 0 0 0 B4DJ73;B4DHL5;B4E228;Q6NW34;B4E1X5;B4DUV5;B4DVN9 B4DJ73 B4DJ73 C3orf17 Uncharacterized protein C3orf17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.8262 2 590.81967 1179.62479 76088.41 0.65486 0.00038691 -0.78278 -0.00046248 -0.12792 -7.5575E-05 590.819301674816 594.825760121415 27.762 0.28582 27.762 27.657 27.943 -1.9073E-06 47 17 5 0 0 0 0.027729 1 12975 40.058 25.193 1 1.0181 1.0342 0 10286000 5305400 4980300 15179 977 5777 5911 23665 23665 HLEAQGTSLPK 11 1 0 Unmodified _HLEAQGTSLPK_ 0 0 0 B4DJ73;B4DHL5;B4E228;Q6NW34;B4E1X5;B4DUV5;B4DVN9 B4DJ73 B4DJ73 C3orf17 Uncharacterized protein C3orf17 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.2664 2 590.81967 1179.62479 81938.98 1.2134 0.00071691 0.24753 0.00014625 1.4609 0.00086315 590.819518960904 594.826720466816 26.853 0.22343 26.853 26.745 26.968 0 36 10 5 0 0 0 0.024829 1 12230 68.371 51.274 1 1.3056 1.3568 0 9918300 4098600 5819800 15180 977 5777 5911 23666 23666 HLEEQIAK 8 1 0 Unmodified _HLEEQIAK_ 0 0 0 A8K031;O14777 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2709 2 484.263999 966.513445 NaN NaN NaN 0.53286 0.00025804 NaN NaN NaN NaN 20.772 0.31536 20.772 20.644 20.959 0 0 0 0 0.026215 1 7163 61.582 18.713 1 NaN NaN 0 14544000 0 14544000 15181 696 5778 5912 23667 23667 HLEINPDHPIVETLR 15 0 1 Unmodified _HLEINPDHPIVETLR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.3244 3 594.988087 1781.94243 78508.36 0.86126 0.00051244 -0.35681 -0.0002123 0.50445 0.00030014 594.987872027525 598.65775990001 81.758 1.2064 81.758 81.555 82.761 -7.6294E-06 306 103 6 0 0 0 8.0826E-11 1 48793 118.47 118.47 1 2.0441 2.2234 0 50788000 16564000 34224000 15182 379 5779 5913 23668 23668 HLEINPDHPIVETLR 15 0 1 Unmodified _HLEINPDHPIVETLR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.6584 3 594.988087 1781.94243 NaN NaN NaN -0.064273 -3.8242E-05 NaN NaN NaN NaN 81.569 1.1265 81.569 80.595 81.721 7.6294E-06 0 0 0 0.0037583 1 48238 48.883 37.604 1 NaN NaN 0 54091000 0 54091000 15183 379 5779 5913 23669 23669 HLEINPDHPIVETLR 15 0 1 Unmodified _HLEINPDHPIVETLR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.9877 3 594.988087 1781.94243 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.561 1 81.561 81.061 82.061 -7.6294E-06 0 0 0 0.00021369 1 48626 91.789 73.989 1 15184 379 5779 5913 23670 23670 HLEINPDHPIVETLR 15 0 1 Unmodified _HLEINPDHPIVETLR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.3244 3 594.988087 1781.94243 77937.89 0.4773 0.00028398 0.15768 9.3816E-05 0.63497 0.0003778 594.988177715199 598.324214787163 86.029 1.6108 86.029 85.619 87.23 -7.6294E-06 543 102 9 0 0 0 0.00015976 1 47025 55.755 51.653 1 1.4794 1.2455 0 27720000 12293000 15427000 15185 379 5779 5913 23671 23671 HLEINPDHPIVETLR 15 0 1 Unmodified _HLEINPDHPIVETLR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.325 3 594.988087 1781.94243 77970.68 0.6214 0.00036973 0.053587 3.1884E-05 0.67499 0.00040161 595.32280377719 598.324217241389 85.677 1.6836 85.677 85.1 86.784 0 532 101 9 0 0 0 9.3458E-11 1 46048 117.4 110.99 1 1.4499 1.2618 0 24778000 10741000 14037000 15186 379 5779 5913 23672 23672 HLEINPDHSIIETLR 15 0 1 Unmodified _HLEINPDHSIIETLR_ 0 0 0 K9JA46;P07900;Q8TBA7;O75322;Q96HX7 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.9906 3 596.319725 1785.93735 81427.06 0.66505 0.00039658 -0.20076 -0.00011972 0.46428 0.00027686 596.3191727246 599.655917539978 94.897 0.55464 94.897 94.741 95.295 0 110 40 5 0 0 0 0.00017047 1 53115 55.011 55.011 1 2.0773 1.7369 0 3681800 958480 2723300 15187 1348 5780 5914 23673 23673 HLELYDR 7 0 1 Unmodified _HLELYDR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2432 2 473.243067 944.47158 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.277 1 31.277 30.777 31.777 0 0 0 0 0.019284 1 15441 94.262 51.798 1 15188 1936 5781 5915 23674 23674 HLETEEELK 9 1 0 Unmodified _HLETEEELK_ 0 0 0 A0A087X0P0;Q02224 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.2891 2 564.282586 1126.55062 NaN NaN NaN -0.4374 -0.00024681 NaN NaN NaN NaN 23.859 0.30889 23.859 23.725 24.034 0 0 0 0 0.04687 1 9719 48.036 27.515 1 NaN NaN 0 3875200 0 3875200 15189 445 5782 5916 23675 23675 HLFGQPNSAYDFK 13 1 0 Unmodified _HLFGQPNSAYDFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.3677 2 762.367515 1522.72048 71360.66 0.56707 0.00043231 0.32815 0.00025017 0.89522 0.00068248 762.36782507483 766.374873980538 68.168 1.2738 68.168 67.713 68.987 0 498 111 5 0 0 0 0.00014516 2 39439 83.226 57.789 1 0.89245 0.97208 0 49423000 25593000 23830000 15190 69 5783 5917 23676;23677 23677 HLFGQPNSAYDFK 13 1 0 Unmodified _HLFGQPNSAYDFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.3757 2 762.367515 1522.72048 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.113 1 69.113 68.613 69.613 0 0 0 0 0.0065378 1 40106 56.548 37.768 1 15191 69 5783 5917 23678 23678 HLFGQPNSAYDFK 13 1 0 Unmodified _HLFGQPNSAYDFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.9286 3 508.580769 1522.72048 87132.54 0.47633 0.00024225 0.088669 4.5096E-05 0.565 0.00028735 508.915522953783 511.585889783231 68.144 0.60598 68.144 67.908 68.514 0 107 54 4 0 0 0 0.042434 1 39596 34.331 31.905 1 1.0096 1.0048 0 9621500 5670700 3950800 15192 69 5783 5917 23679 23679 HLFGQPNSAYDFK 13 1 0 Unmodified _HLFGQPNSAYDFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.3742 2 762.367515 1522.72048 68284.13 0.39179 0.00029869 -0.7307 -0.00055706 -0.33891 -0.00025837 762.366853289377 766.374424780502 65.897 1.1512 65.897 65.51 66.661 0 499 96 8 0 0 0 1.8317E-06 3 38791 110.39 74.846 1 0.85835 0.96891 0 65207000 33570000 31637000 15193 69 5783 5917 23680;23681;23682 23680 HLFGQPNSAYDFK 13 1 0 Unmodified _HLFGQPNSAYDFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.5811 3 508.580769 1522.72048 85274.03 0.232 0.00011799 -0.38494 -0.00019577 -0.15294 -7.7784E-05 508.915414577529 511.251956109284 66.143 0.87788 66.143 65.682 66.56 0 252 73 6 0 0 0 3.5187E-05 2 38935 63.76 55.161 1 1.2566 1.2554 0 15186000 6816000 8369600 15194 69 5783 5917 23683;23684 23684 HLFGQPNSAYDFK 13 1 0 Unmodified _HLFGQPNSAYDFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 508.9154 3 508.580769 1522.72048 85460.09 0.29825 0.00015168 -0.065323 -3.3222E-05 0.23292 0.00011846 508.580682918382 511.25205316757 76.782 0.81017 76.782 76.493 77.303 0 242 53 7 0 0 0 3.5363E-05 2 40988 55.105 52.743 1 1.9228 1.5235 0 4873900 1759800 3114200 15195 69 5783 5917 23685;23686 23686 HLFGQPNSAYDFK 13 1 0 Unmodified _HLFGQPNSAYDFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 766.3752 2 762.367515 1522.72048 70496.94 0.46258 0.00035266 -0.1436 -0.00010947 0.31899 0.00024319 762.367488588839 766.374593288409 76.819 2.0184 76.819 76.202 78.221 0 773 137 9 0 0 0 3.0063E-06 4 40886 108.9 73.362 1 1.8075 1.4693 0 28996000 10448000 18548000 15196 69 5783 5917 23687;23688;23689;23690 23687 HLFGQPNSAYDFK 13 1 0 Unmodified _HLFGQPNSAYDFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.3749 2 762.367515 1522.72048 69272.73 0.63767 0.00048614 -0.19563 -0.00014914 0.44204 0.000337 762.367097100296 766.374629113518 76.902 2.086 76.902 76.359 78.445 0 740 139 9 0 0 0 8.0417E-09 4 40595 117.09 81.58 1 1.7081 1.3918 0 25681000 9639600 16042000 15197 69 5783 5917 23691;23692;23693;23694 23693 HLFGQPNSAYDFK 13 1 0 Unmodified _HLFGQPNSAYDFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 508.9157 3 508.580769 1522.72048 85307.25 0.34144 0.00017365 0.15676 7.9726E-05 0.4982 0.00025338 508.580534743233 511.252299468209 76.872 0.91715 76.872 76.614 77.531 -7.6294E-06 261 61 7 0 0 0 4.7516E-05 3 40218 66.393 61.844 1 1.6524 1.2864 0 3525300 1382000 2143200 15198 69 5783 5917 23695;23696;23697 23696 HLFLLLK 7 1 0 Unmodified _HLFLLLK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.2928 2 442.291831 882.569109 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.882 1 93.882 93.382 94.382 -7.6294E-06 0 0 0 0.015223 1 56995 81.297 24.223 1 15199 1412 5784 5918 23698 23698 HLFLLLK 7 1 0 Unmodified _HLFLLLK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2984 2 442.291831 882.569109 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.939 1 93.939 93.439 94.439 0 0 0 0 0.036269 1 57038 71.067 21.755 1 15200 1412 5784 5918 23699 23699 HLFLLLK 7 1 0 Unmodified _HLFLLLK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.2915 2 442.291831 882.569109 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.489 1 94.489 93.989 94.989 0 0 0 0 0.014667 1 57396 86.344 25.019 1 15201 1412 5784 5918 23700 23700 HLFLLLK 7 1 0 Unmodified _HLFLLLK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.2917 2 442.291831 882.569109 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.124 1 91.124 90.624 91.624 0 0 0 0 0.013655 1 56401 84.609 23.284 1 15202 1412 5784 5918 23701 23701 HLFLLLK 7 1 0 Unmodified _HLFLLLK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 446.2987 2 442.291831 882.569109 NaN NaN NaN -0.079315 -3.508E-05 NaN NaN NaN NaN 101.75 0.45031 101.75 101.65 102.1 0 0 0 0 0.031122 1 57697 69.39 23.039 1 NaN NaN 0 2087500 0 2087500 15203 1412 5784 5918 23702 23702 HLGLLEK 7 1 0 Unmodified _HLGLLEK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.2473 2 405.247621 808.480688 94686.58 0.27344 0.00011081 -0.039364 -1.5952E-05 0.23408 9.486E-05 405.247372837357 409.254587935002 38.35 0.60886 38.35 38.096 38.704 -3.8147E-06 196 51 5 0 0 0 0.020239 2 19686 94.262 48.267 1 0.91226 0.99017 0 45849000 23440000 22409000 15204 2132 5785 5919 23703;23704 23704 HLGLLEK 7 1 0 Unmodified _HLGLLEK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 409.2547 2 405.247621 808.480688 94839.4 0.42906 0.00017387 -0.047384 -1.9202E-05 0.38167 0.00015467 405.247456240699 409.254614131791 35.78 0.85886 35.78 35.485 36.344 3.8147E-06 215 71 5 0 0 0 0.026743 1 18164 77.741 41.184 1 0.84279 0.93198 0 45100000 24417000 20683000 15205 2132 5785 5919 23705 23705 HLIFVLNK 8 1 0 Unmodified _HLIFVLNK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.3124 2 492.30547 982.596387 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.817 1 75.817 75.317 76.317 0 0 0 0 0.0025577 1 44628 99.384 68.666 1 15206 1721 5786 5920 23706 23706 HLIFVLNK 8 1 0 Unmodified _HLIFVLNK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.3127 2 492.30547 982.596387 NaN NaN NaN 0.22173 0.00010916 NaN NaN NaN NaN 73.376 0.77005 73.376 73.005 73.775 0 0 0 0 0.0024743 1 43897 107.74 91.591 1 NaN NaN 0 6846100 0 6846100 15207 1721 5786 5920 23707 23707 HLIFVLNK 8 1 0 Unmodified _HLIFVLNK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.3123 2 492.30547 982.596387 87678.49 0.14691 7.2324E-05 0.19546 9.6226E-05 0.34237 0.00016855 492.305550094548 496.312612606768 83.171 0.44469 83.171 83.011 83.456 0 98 24 6 0 0 0 0.0010004 1 45326 118.06 101.9 1 1.3077 1.0308 0 5565000 2247300 3317700 15208 1721 5786 5920 23708 23708 HLIFVLNK 8 1 0 Unmodified _HLIFVLNK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 496.3126 2 492.30547 982.596387 86720.95 0.22585 0.00011119 0.027949 1.3759E-05 0.2538 0.00012495 492.305436787443 496.31246930565 83.149 0.57817 83.149 82.96 83.538 0 126 32 6 0 0 0 0.0042686 1 44432 94.163 80.492 1 1.4895 1.2142 0 4628500 1806500 2822000 15209 1721 5786 5920 23709 23709 HLILPEK 7 1 0 Unmodified _HLILPEK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.263 2 425.263271 848.511988 92907.02 0.12637 5.3743E-05 0.14177 6.0291E-05 0.26815 0.00011403 425.263230375661 429.270272024955 34.745 0.39977 34.745 34.589 34.988 0 137 33 6 0 0 0 0.022039 1 17609 92.467 15.62 1 0.83683 0.94097 0 72493000 36508000 35985000 15210 1411 5787 5921 23710 23710 HLIPAANTGESK 12 1 0 Unmodified _HLIPAANTGESK_ 0 0 0 V9HW98;P62258;G9K389;G9K388;B7ZA86 V9HW98 V9HW98 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.3378 2 619.330402 1236.64625 NaN NaN NaN 0.083224 5.1543E-05 NaN NaN NaN NaN 25.956 0.3139 25.956 25.791 26.105 0 0 0 0 4.0771E-08 1 11392 106.62 29.561 1 NaN NaN 0 31841000 0 31841000 15211 1637 5788 5922 23711 23711 HLIPAANTGESK 12 1 0 Unmodified _HLIPAANTGESK_ 0 0 0 V9HW98;P62258;G9K389;G9K388;B7ZA86 V9HW98 V9HW98 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.337 2 619.330402 1236.64625 78213.16 0.12717 7.876E-05 0.74667 0.00046244 0.87384 0.0005412 619.331201154506 623.337591250622 29.423 0.50531 29.423 29.263 29.769 0 79 29 6 0 0 0 0.021241 1 11487 38.804 27.975 1 1.8519 1.5584 0 1488900 570510 918340 15212 1637 5788 5922 23712 23712 HLLEAFK 7 1 0 Unmodified _HLLEAFK_ 0 0 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.2548 2 429.247621 856.480688 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.281 1 49.281 48.781 49.781 0 0 0 0 0.051937 1 27027 65.676 35.869 1 15213 1400 5789 5923 23713 23713 HLLEGQNASVLAYGPTGAGK 20 1 0 Unmodified _HLLEGQNASVLAYGPTGAGK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.0215 3 661.681323 1982.02214 78205.93 0.48669 0.00032203 -0.20324 -0.00013448 0.28344 0.00018755 662.015467503551 664.35216497279 74.783 0.8133 74.783 74.46 75.274 0 298 71 5 0 0 0 4.8571E-05 1 45123 40.354 40.354 1 0.75637 0.7748 0 31834000 19979000 11856000 15214 1745 5790 5924 23714 23714 HLLEGQNASVLAYGPTGAGK 20 1 0 Unmodified _HLLEGQNASVLAYGPTGAGK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.352 3 661.681323 1982.02214 75367.08 0.53686 0.00035523 -0.21576 -0.00014276 0.3211 0.00021247 661.681505345314 664.68700539808 86.428 1.0517 86.428 86.179 87.23 -7.6294E-06 252 66 6 0 0 0 0.035503 1 47610 14.905 14.905 1 1.4393 1.1351 0 5910000 2623500 3286400 15215 1745 5790 5924 23715 23715 HLLEGQNASVLAYGPTGAGK 20 1 0 Unmodified _HLLEGQNASVLAYGPTGAGK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.0161 3 661.681323 1982.02214 73956 0.58859 0.00038946 -0.052132 -3.4495E-05 0.53646 0.00035497 662.348884828908 664.68696945998 86.34 0.86565 86.34 86.082 86.948 -7.6294E-06 226 52 8 0 0 0 6.5413E-05 1 46515 36.997 36.997 1 1.0997 0.89737 0 6254300 2600100 3654100 15216 1745 5790 5924 23716 23716 HLLGVEDLLQK 11 1 0 Unmodified _HLLGVEDLLQK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8743 2 632.86662 1263.71869 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.003 1 94.003 93.503 94.503 0 0 0 0 0.0037381 1 58389 66.568 35.881 1 15217 415 5791 5925 23717 23717 HLLGVEDLLQK 11 1 0 Unmodified _HLLGVEDLLQK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.8742 2 632.86662 1263.71869 NaN NaN NaN -0.10888 -6.8904E-05 NaN NaN NaN NaN 107.4 0.5961 107.4 107.13 107.72 0 0 0 0 0.037069 1 61482 48.091 24.061 1 NaN NaN 0 1719100 0 1719100 15218 415 5791 5925 23718 23718 HLLGVEDLLQK 11 1 0 Unmodified _HLLGVEDLLQK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8742 2 632.86662 1263.71869 NaN NaN NaN 0.32156 0.0002035 NaN NaN NaN NaN 106.94 0.54786 106.94 106.76 107.3 0 0 0 0 0.044153 1 60320 45.997 8.5209 1 NaN NaN 0 2207600 0 2207600 15219 415 5791 5925 23719 23719 HLLIGLPSGAILSLPK 16 1 0 Unmodified _HLLIGLPSGAILSLPK_ 0 0 0 Q8N766;H7C4E3 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.6744 3 543.674781 1628.00251 NaN NaN NaN -0.54436 -0.00029596 NaN NaN NaN NaN 122.02 0.23658 122.02 121.95 122.18 0 0 0 0 0.036532 1 78958 27.208 26.419 1 NaN NaN 0 1755700 1755700 0 15220 1913 5792 5926 23720 23720 HLLIGLPSGAILSLPK 16 1 0 Unmodified _HLLIGLPSGAILSLPK_ 0 0 0 Q8N766;H7C4E3 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.0092 3 543.674781 1628.00251 83470.82 1.0873 0.00059111 -0.66403 -0.00036101 0.42323 0.0002301 543.674463942269 546.345682931877 121.3 0.44081 121.3 121.09 121.53 0 97 29 6 0 0 0 4.7127E-05 1 80342 67.326 67.326 1 0.7805 0.80871 0 4715700 1900500 2815200 15221 1913 5792 5926 23721 23721 HLLIGLPSGAILSLPK 16 1 0 Unmodified _HLLIGLPSGAILSLPK_ 0 0 0 Q8N766;H7C4E3 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.0092 3 543.674781 1628.00251 82610.55 0.81477 0.00044297 -0.25746 -0.00013998 0.55731 0.000303 544.00892528594 546.346131543447 133.54 0.64218 133.54 133.35 134 0 99 25 6 0 0 0 0.0089192 2 81296 24.287 24.287 1 0.67514 0.56968 0 1949300 1047300 902100 15222 1913 5792 5926 23722;23723 23722 HLLIGLPSGAILSLPK 16 1 0 Unmodified _HLLIGLPSGAILSLPK_ 0 0 0 Q8N766;H7C4E3 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.5184 2 815.008533 1628.00251 NaN NaN NaN 0.025654 2.0908E-05 NaN NaN NaN NaN 133.55 0.45572 133.55 133.35 133.81 0 0 0 0 0.0092496 1 81347 48.998 43.457 1 NaN NaN 0 645960 0 645960 15223 1913 5792 5926 23724 23724 HLLLAPSDVAGWGIFIK 17 1 0 Unmodified _HLLLAPSDVAGWGIFIK_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.6887 3 613.017207 1836.02979 77790.22 0.63057 0.00038655 -0.21777 -0.0001335 0.4128 0.00025305 613.351530872204 615.688328025111 132.88 0.43922 132.88 132.6 133.04 0 94 22 8 0 0 0 0.017365 1 86740 21.841 21.841 1 0.96388 0.94474 0 20970000 10160000 10811000 15224 456 5793 5927 23725 23725 HLLPTSGAAATAAAAAAAAAAVTAASTSYYGR 32 0 1 Unmodified _HLLPTSGAAATAAAAAAAAAAVTAASTSYYGR_ 0 0 0 A8K9U0;Q9BWF3;E9PB51 A8K9U0 A8K9U0 RBM4 RNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 972.8361 3 969.164938 2904.47298 60264.48 0.45999 0.00044581 0.30501 0.0002956 0.765 0.00074141 969.500516920339 972.835623076336 133.09 0.36554 133.09 132.9 133.26 0 80 14 12 0 0 0 4.6256E-44 1 89332 115.76 115.76 1 1.504 1.699 0 47277000 16232000 31045000 15225 788 5794 5928 23726 23726 HLLPVETQR 9 0 1 Unmodified _HLLPVETQR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.816 2 546.811648 1091.60874 84355.73 0.54617 0.00029865 -0.19208 -0.00010503 0.35409 0.00019362 546.8117492015 551.815657620915 39.003 0.36259 39.003 38.84 39.202 0 98 29 5 0 0 0 0.016543 1 20617 53.775 30.199 1 2.0772 2.2173 0 24700000 7523600 17176000 15226 1729 5795 5929 23727 23727 HLLQGWLR 8 0 1 Unmodified _HLLQGWLR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.803 2 511.798343 1021.58213 85659.77 0.52609 0.00026925 -0.42451 -0.00021726 0.10158 5.199E-05 511.797902520784 516.802266628385 79.061 0.7047 79.061 78.599 79.304 0 182 64 4 0 0 0 0.031924 2 46590 50.966 41.328 1 1.1763 1.1925 0 28141000 10808000 17333000 15227 1995 5796 5930 23728;23729 23728 HLLQGWLR 8 0 1 Unmodified _HLLQGWLR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7985 2 511.798343 1021.58213 84249.75 0.52213 0.00026722 -0.32862 -0.00016819 0.19351 9.9036E-05 511.798239598192 516.801829109109 74.589 0.30643 74.589 74.363 74.67 0 90 26 5 0 0 0 0.027969 1 44903 53.554 53.554 1 0.94281 1.0177 0 26452000 15191000 11260000 15228 1995 5796 5930 23730 23730 HLLQGWLR 8 0 1 Unmodified _HLLQGWLR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.799 2 511.798343 1021.58213 84249.77 0.28206 0.00014436 0.028478 1.4575E-05 0.31054 0.00015893 511.798584364883 516.802122545534 74.758 1.3067 74.758 74.618 75.924 7.6294E-06 296 117 5 0 0 0 0.0293 1 45523 52.683 37.908 1 0.90147 0.92189 0 20859000 10798000 10061000 15229 1995 5796 5930 23731 23731 HLLQGWLR 8 0 1 Unmodified _HLLQGWLR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.8024 2 511.798343 1021.58213 85513.6 0.37718 0.00019304 -0.066726 -3.415E-05 0.31045 0.00015889 511.798255930011 516.802301670671 85.915 1.6062 85.915 85.446 87.052 0 407 103 6 0 0 0 0.036951 2 46908 48.504 43.064 1 1.6145 1.3444 0 10693000 4344500 6348300 15230 1995 5796 5930 23732;23733 23732 HLLQGWLR 8 0 1 Unmodified _HLLQGWLR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.7987 2 511.798343 1021.58213 85180.13 0.40782 0.00020872 -0.14777 -7.563E-05 0.26004 0.00013309 511.798215352805 516.802286951673 85.412 1.9517 85.412 84.948 86.9 -7.6294E-06 434 121 6 0 0 0 0.056159 1 45834 41.502 41.502 1 1.6155 1.3375 0 7944500 3286600 4657900 15231 1995 5796 5930 23734 23734 HLLSAGDGEVK 11 1 0 Unmodified _HLLSAGDGEVK_ 0 0 0 Q86W42 Q86W42 Q86W42 THOC6 THO complex subunit 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.299 2 563.29857 1124.58259 80175.04 0.53393 0.00030076 0.76175 0.00042909 1.2957 0.00072986 563.298701740147 567.306287366766 27.806 0.46631 27.806 27.628 28.095 1.9073E-06 80 26 5 0 0 0 0.00041899 2 13080 79.986 62.746 1 1.0576 1.0767 0 12392000 5105300 7286700 15232 1886 5797 5931 23735;23736 23736 HLLSQPLFTESQK 13 1 0 Unmodified _HLLSQPLFTESQK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;A0A087WXU8;Q7Z4X3;Q7Z4W0 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.4193 2 764.411923 1526.80929 NaN NaN NaN -0.063406 -4.8468E-05 NaN NaN NaN NaN 71.78 0.60995 71.78 71.465 72.075 0 0 0 0 0.0042051 1 41833 62.303 34.56 1 NaN NaN 0 7861600 0 7861600 15233 993 5798 5932 23737 23737 HLLSQPLFTESQK 13 1 0 Unmodified _HLLSQPLFTESQK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;A0A087WXU8;Q7Z4X3;Q7Z4W0 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.4207 2 764.411923 1526.80929 72331.55 0.47628 0.00036407 0.055308 4.2278E-05 0.53159 0.00040635 764.411708351517 768.419252321657 69.529 0.66869 69.529 69.177 69.845 0 220 56 6 0 0 0 0.00013877 1 41283 81.625 81.625 1 0.85085 0.8524 0 13897000 7819900 6076700 15234 993 5798 5932 23738 23738 HLLSQPLFTESQK 13 1 0 Unmodified _HLLSQPLFTESQK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;A0A087WXU8;Q7Z4X3;Q7Z4W0 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.4118 2 764.411923 1526.80929 71283.01 0.43199 0.00033022 0.058341 4.4597E-05 0.49033 0.00037482 764.411575320605 768.419134403616 80.133 0.47097 80.133 79.934 80.405 0 112 29 6 0 0 0 0.0014362 2 43257 57.836 57.836 1 1.0797 0.85598 0 4282500 1906700 2375800 15235 993 5798 5932 23739;23740 23740 HLLSQPLFTESQK 13 1 0 Unmodified _HLLSQPLFTESQK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;A0A087WXU8;Q7Z4X3;Q7Z4W0 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.4198 2 764.411923 1526.80929 70328.94 0.6307 0.00048212 0.063634 4.8642E-05 0.69433 0.00053076 764.411781604071 768.418954326927 80.223 0.65162 80.223 79.883 80.535 0 141 37 5 0 0 0 0.00021605 2 42471 69.721 69.721 1 0.92702 0.73063 0 3888400 2154800 1733600 15236 993 5798 5932 23741;23742 23741 HLLVSNVGGDGEEIER 16 0 1 Unmodified _HLLVSNVGGDGEEIER_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.2975 3 575.291835 1722.85368 78935.08 0.4458 0.00025646 0.10584 6.0888E-05 0.55164 0.00031735 575.29194640366 579.296245492465 61.502 1.0598 61.502 61.122 62.182 3.8147E-06 305 84 5 0 0 0 0.00096285 1 35385 27.715 27.715 1 1.4167 1.4715 0 20820000 7791900 13028000 15237 39 5799 5933 23743 23743 HLMLPDFDLLEDIESK 16 1 0 Oxidation (M) _HLM(ox)LPDFDLLEDIESK_ HLM(1)LPDFDLLEDIESK HLM(48.9)LPDFDLLEDIESK 0 1 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.321 3 644.320403 1929.93938 76602.34 0.84011 0.0005413 -0.17357 -0.00011184 0.66654 0.00042946 644.320368960454 646.991520819258 128.74 1.0599 128.74 127.9 128.96 1.5259E-05 303 69 8 0 0 0 0.00014507 1 83508 48.899 48.899 1 0.45333 0.44572 0 20044000 14342000 5702600 15238 1476 5800 5934 23744 23744 1220 HLMLPDFDLLEDIESK 16 1 0 Oxidation (M) _HLM(ox)LPDFDLLEDIESK_ HLM(1)LPDFDLLEDIESK HLM(79.02)LPDFDLLEDIESK 0 1 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.655 3 644.320403 1929.93938 78197.44 0.40802 0.0002629 0.3203 0.00020637 0.72832 0.00046927 644.320881689147 647.326218182313 129.2 1.1681 129.2 128.82 129.99 0 188 82 4 0 0 0 2.6721E-05 1 84692 79.022 79.022 1 0.51718 0.55004 0 31727000 21531000 10196000 15239 1476 5800 5934 23745 23745 1220 HLMLPDFDLLEDIESK 16 1 0 Oxidation (M) _HLM(ox)LPDFDLLEDIESK_ HLM(1)LPDFDLLEDIESK HLM(47.64)LPDFDLLEDIESK 0 1 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.3208 3 644.320403 1929.93938 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.62 1 129.62 129.12 130.12 1.5259E-05 0 0 0 0.0016192 1 84469 47.64 41.723 1 15240 1476 5800 5934 23746 23746 1220 HLMLPDFDLLEDIESK 16 1 0 Oxidation (M) _HLM(ox)LPDFDLLEDIESK_ HLM(1)LPDFDLLEDIESK HLM(51.89)LPDFDLLEDIESK 0 1 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.9922 3 644.320403 1929.93938 76798.58 0.97717 0.00062961 0.14972 9.6467E-05 1.1269 0.00072608 644.320487709685 647.326347342159 127.84 0.72237 127.84 127.15 127.87 0 216 45 7 0 0 0 9.4167E-05 2 85098 51.888 51.888 1 0.42043 0.46266 0 42674000 29105000 13569000 15241 1476 5800 5934 23747;23748 23748 1220 HLMLPDFDLLEDIESK 16 1 0 Oxidation (M) _HLM(ox)LPDFDLLEDIESK_ HLM(1)LPDFDLLEDIESK HLM(129.76)LPDFDLLEDIESK 0 1 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.4824 2 965.976967 1929.93938 61416.98 0.68553 0.0006622 0.74546 0.0007201 1.431 0.0013823 966.480145307472 970.485756716585 127.85 0.72237 127.85 127.15 127.87 0 245 45 8 0 0 0 8.4174E-18 1 85415 129.76 129.76 1 0.47584 0.53527 0 56520000 38611000 17909000 15242 1476 5800 5934 23749 23749 1220 HLMLPDFDLLEDIESK 16 1 0 Oxidation (M) _HLM(ox)LPDFDLLEDIESK_ HLM(1)LPDFDLLEDIESK HLM(105.14)LPDFDLLEDIESK 0 1 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.3214 3 644.320403 1929.93938 76233.83 0.71321 0.00045954 0.041323 2.6625E-05 0.75453 0.00048616 644.320638102621 646.99161036475 128.41 1.4741 128.41 127.82 129.29 0 446 113 9 0 0 0 3.3636E-09 2 85665 105.14 105.14 1 0.46943 0.52835 0 56814000 45110000 11704000 15243 1476 5800 5934 23750;23751 23750 1220 HLMLPDFDLLEDIESK 16 1 0 Oxidation (M) _HLM(ox)LPDFDLLEDIESK_ HLM(1)LPDFDLLEDIESK HLM(53.56)LPDFDLLEDIESK 0 1 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.6548 3 644.320403 1929.93938 75482.31 0.78302 0.00050452 -0.38924 -0.00025079 0.39378 0.00025372 644.654485750551 647.326005372481 134.64 0.2438 134.64 134.56 134.8 0 26 5 7 0 0 0 8.5045E-05 1 82338 53.565 53.565 1 0.28336 0.22679 0 20707000 16161000 4546600 15244 1476 5800 5934 23752 23752 1220 HLMLPDFDLLEDIESK 16 1 0 Oxidation (M) _HLM(ox)LPDFDLLEDIESK_ HLM(1)LPDFDLLEDIESK HLM(56.96)LPDFDLLEDIESK 0 1 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 965.9778 2 965.976967 1929.93938 61564.55 0.18861 0.0001822 0.12705 0.00012273 0.31566 0.00030492 965.977563678121 969.985629327225 134.64 0.34528 134.64 134.45 134.8 0 35 9 8 0 0 0 0.00012736 1 82341 56.956 51.677 1 0.26177 0.2165 0 43751000 33735000 10015000 15245 1476 5800 5934 23753 23753 1220 HLMLSSVLSK 10 1 0 Oxidation (M) _HLM(ox)LSSVLSK_ HLM(1)LSSVLSK HLM(41.45)LSSVLSK 0 1 0 A0A0A0YP96;A0A0A0YLX2 A0A0A0YP96 A0A0A0YP96 U38 DNA polymerase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.822 2 565.815541 1129.61653 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.518 1 35.518 35.018 36.018 0 0 0 0 0.034858 1 17878 41.448 7.5728 1 15246 490 5801 5935 23754 23754 337 HLMQDLR 7 0 1 Unmodified _HLMQDLR_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 456.7397 2 456.739637 911.464721 88514.98 0.0087622 4.0021E-06 0.2366 0.00010806 0.24536 0.00011207 456.739905838282 461.743500366896 32.69 0.40485 32.69 32.513 32.918 0 64 19 6 0 0 0 0.041494 1 14164 58.981 6.298 1 0.60877 0.51677 0 5178200 3061400 2116800 15247 1934 5802 5936 23755 23755 HLNDDVVK 8 1 0 Unmodified _HLNDDVVK_ 0 0 0 C9JKI3;Q7Z4F3;A0A024R757;E9PCT5;A9XTE5;Q2TNI1;Q59E85;Q03135 C9JKI3 C9JKI3 CAV1 Caveolin;Caveolin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.248 2 470.248349 938.482145 89033.63 0.32836 0.00015441 -0.16652 -7.8307E-05 0.16183 7.6102E-05 470.248132265511 474.255231726021 20.715 0.48085 20.715 20.569 21.049 0 43 18 6 0 0 0 0.00037076 1 6978 133.23 77.224 1 1.125 1.2174 0 38673000 18037000 20635000 15248 215 5803 5937 23756 23756 HLNPDTELK 9 1 0 Unmodified _HLNPDTELK_ 0 0 0 Q9BQ70;Q9H7D3;H3BSP8;H3BTU3;H3BQ53;H3BSS3 Q9BQ70 Q9BQ70 TCF25 Transcription factor 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.7885 2 533.780013 1065.54547 80145.16 0.64397 0.00034374 0.0087739 4.6834E-06 0.65274 0.00034842 533.780851278908 537.787383854451 26.396 0.36378 26.396 26.191 26.555 0 48 22 4 0 0 0 0.0021437 1 11859 76.221 55.596 1 1.093 1.1099 0 6501700 2439900 4061800 15249 1996 5804 5938 23757 23757 HLPDNECIEK 10 1 0 Unmodified _HLPDNECIEK_ 0 0 0 P54136 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.8015 2 627.792795 1253.57104 75529.66 0.5902 0.00037052 0.67452 0.00042346 1.2647 0.00079398 627.793145479433 631.800285734036 25.079 0.42587 25.079 24.946 25.372 0 53 20 4 0 0 0 0.0029629 2 10756 66.692 60.101 1 1.759 1.8522 0 16425000 6251000 10174000 15250 1609 5805 5939 23758;23759 23758 HLPDNECIEK 10 1 0 Unmodified _HLPDNECIEK_ 0 0 0 P54136 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.8004 2 627.792795 1253.57104 75906.46 1.0276 0.0006451 0.1693 0.00010629 1.1969 0.00075139 627.792789068663 631.800023919741 24.755 0.31417 24.755 24.594 24.908 1.9073E-06 59 14 6 0 0 0 0.0025951 2 10388 68.371 63.169 1 1.716 1.7311 0 16252000 5314500 10938000 15251 1609 5805 5939 23760;23761 23760 HLPDNECIEK 10 1 0 Unmodified _HLPDNECIEK_ 0 0 0 P54136 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.7927 2 627.792795 1253.57104 76042.64 0.54401 0.00034153 0.076518 4.8037E-05 0.62053 0.00038957 627.792518636795 631.800058442725 27.933 0.39166 27.933 27.756 28.148 -1.9073E-06 69 17 6 0 0 0 0.057335 1 11028 35.295 34.792 1 0.98397 0.82227 0 2222500 1066500 1155900 15252 1609 5805 5939 23762 23762 HLPEPVAIK 9 1 0 Unmodified _HLPEPVAIK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.3074 2 502.300384 1002.58622 86258.77 0.61945 0.00031115 -0.14961 -7.5148E-05 0.46984 0.000236 502.3003481099 506.307201481265 49.501 0.47879 49.501 49.316 49.794 0 114 29 6 0 0 0 0.0020972 2 27172 76.827 43.455 1 1.5715 1.75 0 61191000 27594000 33597000 15253 1412 5806 5940 23763;23764 23763 HLPEPVAIK 9 1 0 Unmodified _HLPEPVAIK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.3073 2 502.300384 1002.58622 85987.3 0.39966 0.00020075 -0.077611 -3.8984E-05 0.32205 0.00016176 502.30032364791 506.307367499155 47.472 0.42573 47.472 47.269 47.694 0 150 28 8 0 0 0 0.0063471 2 26362 64.42 37.283 1 1.3513 1.5108 0 106080000 48019000 58063000 15254 1412 5806 5940 23765;23766 23765 HLPEPVAIK 9 1 0 Unmodified _HLPEPVAIK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.3077 2 502.300384 1002.58622 86210.31 0.35384 0.00017773 -0.18113 -9.0982E-05 0.17271 8.6752E-05 502.300347990481 506.307073157165 56.105 1.348 56.105 55.825 57.173 3.8147E-06 257 88 6 0 0 0 0.060649 1 28171 35.872 24.512 1 1.7618 1.3722 0 3733600 1649200 2084400 15255 1412 5806 5940 23767 23767 HLPGVCK 7 1 0 Unmodified _HLPGVCK_ 0 0 0 Q96HS1;F5GXG4 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 409.7251 2 405.718173 809.421793 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.622 1 20.622 20.122 21.122 0 0 0 0 0.04783 1 6893 66.994 30.407 1 15256 1972 5807 5941 23768 23768 HLPPAALHLIAYYK 14 1 0 Unmodified _HLPPAALHLIAYYK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.9805 3 536.308321 1605.90313 NaN NaN NaN 0.26912 0.00014433 NaN NaN NaN NaN 103.88 0.39708 103.88 103.58 103.98 0 0 0 0 0.011815 2 64043 40.287 28.141 1 NaN NaN 0 1906400 0 1906400 15257 2103 5808 5942 23769;23770 23769 HLPPAALHLIAYYK 14 1 0 Unmodified _HLPPAALHLIAYYK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.9795 3 536.308321 1605.90313 NaN NaN NaN 0.098053 5.2587E-05 NaN NaN NaN NaN 99.62 0.25714 99.62 99.539 99.796 0 0 0 0 0.046787 1 62449 27.34 15.194 1 NaN NaN 0 3712800 0 3712800 15258 2103 5808 5942 23771 23771 HLPPAALHLIAYYK 14 1 0 Unmodified _HLPPAALHLIAYYK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.3144 3 536.308321 1605.90313 NaN NaN NaN 0.01337 7.1705E-06 NaN NaN NaN NaN 104.14 1.9228 104.14 103.54 105.47 0 0 0 0 0.00074324 1 59140 65.563 53.949 1 NaN NaN 0 5985800 0 5985800 15259 2103 5808 5942 23772 23772 HLPPQLR 7 0 1 Unmodified _HLPPQLR_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00;A0PJ76;F5GZK7;F5H431 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7589 2 430.758687 859.502821 90398.49 -0.001828 -7.8744E-07 0.39446 0.00016992 0.39263 0.00016913 430.758800486543 435.762831524842 27.988 1.1955 27.988 27.083 28.278 0 202 75 5 0 0 0 0.042191 1 13156 58.661 45.672 1 0.91445 0.93543 0 34841000 17600000 17241000 15260 908 5809 5943 23773 23773 HLPSTEPDPHVVR 13 0 1 Unmodified _HLPSTEPDPHVVR_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0;M0QYZ0;M0QYM5;M0QYI8 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.5961 3 495.259918 1482.75793 88466.69 0.31154 0.0001543 -0.25289 -0.00012525 0.058653 2.9049E-05 495.25932814953 498.930367848365 31.889 0.37199 31.889 31.705 32.077 0 73 30 4 0 0 0 0.00011349 3 15867 51.211 43.761 1 1.0653 1.0559 0 15717000 8393800 7323500 15261 49 5810 5944 23774;23775;23776 23776 HLPTLDHPIIPADYVAIK 18 1 0 Unmodified _HLPTLDHPIIPADYVAIK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.045 3 671.710442 2012.1095 77851.4 0.86715 0.00058248 0.32137 0.00021587 1.1885 0.00079834 672.044935123606 674.381958288667 114.61 0.32632 114.61 114.45 114.78 -7.6294E-06 58 14 6 0 0 0 0.036824 1 67001 16.494 16.494 1 0.9363 0.79762 0 1153100 579680 573420 15262 148 5811 5945 23777 23777 HLPVEEQLK 9 1 0 Unmodified _HLPVEEQLK_ 0 0 0 P55201 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.8063 2 546.806031 1091.59751 85173.84 0.3525 0.00019275 0.60152 0.00032891 0.95401 0.00052166 547.308058484694 550.813280206426 37.336 0.49653 37.336 37.079 37.575 0 130 40 4 0 0 0 0.017855 1 19408 52.591 43.077 1 0.68655 0.71375 0 33700000 20866000 12834000 15263 1616 5812 5946 23778 23778 HLQDLMEGLTAK 12 1 0 Oxidation (M) _HLQDLM(ox)EGLTAK_ HLQDLM(1)EGLTAK HLQDLM(119.74)EGLTAK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.3515 2 686.350477 1370.6864 72978.18 0.71168 0.00048846 -0.086788 -5.9567E-05 0.6249 0.0004289 686.350608356431 690.357551775856 48.238 0.66188 48.238 47.965 48.627 0 343 53 7 0 0 0 1.2075E-08 2 26149 119.74 37.483 1 1.9113 2.1559 0 132010000 46545000 85462000 15264 1470 5813 5947 23779;23780 23779 1186 HLQDLMEGLTAK 12 1 0 Oxidation (M) _HLQDLM(ox)EGLTAK_ HLQDLM(1)EGLTAK HLQDLM(140.45)EGLTAK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.3513 2 686.350477 1370.6864 71791.55 0.63956 0.00043896 -0.054455 -3.7376E-05 0.58511 0.00040159 686.350456799777 690.35756687085 48.96 1.0228 48.96 48.627 49.649 0 394 72 9 0 0 0 4.6092E-18 2 26699 140.45 38.383 1 1.8557 2.1096 0 165250000 53588000 111660000 15265 1470 5813 5947 23781;23782 23781 1186 HLQDLMEGLTAK 12 1 0 Oxidation (M) _HLQDLM(ox)EGLTAK_ HLQDLM(1)EGLTAK HLQDLM(116.24)EGLTAK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.3583 2 686.350477 1370.6864 72611.98 0.72808 0.00049972 0.018218 1.2504E-05 0.7463 0.00051222 686.350640580773 690.357714090218 46.394 0.70361 46.394 46.109 46.813 3.8147E-06 305 55 9 0 0 0 1.9672E-08 2 25470 116.24 24.689 1 1.9957 2.2997 0 181750000 64661000 117090000 15266 1470 5813 5947 23783;23784 23783 1186 HLQDLMEGLTAK 12 1 0 Oxidation (M) _HLQDLM(ox)EGLTAK_ HLQDLM(1)EGLTAK HLQDLM(131.43)EGLTAK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3506 2 686.350477 1370.6864 73288.63 0.51798 0.00035551 0.061618 4.2291E-05 0.5796 0.00039781 686.350589959158 690.357675786779 47.12 0.87808 47.12 46.768 47.646 3.8147E-06 402 68 9 0 0 0 4.7736E-13 2 26048 131.43 32.49 1 1.915 2.2128 0 196770000 64380000 132390000 15267 1470 5813 5947 23785;23786 23786 1186 HLQDLMEGLTAK 12 1 0 Oxidation (M) _HLQDLM(ox)EGLTAK_ HLQDLM(1)EGLTAK HLQDLM(63.69)EGLTAK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.8524 2 686.350477 1370.6864 73507.18 0.5969 0.00040969 -0.075021 -5.1491E-05 0.52188 0.0003582 686.350570009438 690.357514157065 54.913 0.88448 54.913 54.575 55.459 0 349 59 8 0 0 0 0.00045068 2 27327 63.694 13.928 1 0.9673 0.76949 0 6650200 3124500 3525700 15268 1470 5813 5947 23787;23788 23787 1186 HLQDLMEGLTAK 12 1 0 Oxidation (M) _HLQDLM(ox)EGLTAK_ HLQDLM(1)EGLTAK HLQDLM(103.44)EGLTAK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 690.3585 2 686.350477 1370.6864 73185.22 0.57831 0.00039692 -0.076792 -5.2706E-05 0.50152 0.00034422 686.350538106298 690.357602329745 55.767 1.7458 55.767 55.4 57.146 -3.8147E-06 569 112 8 0 0 0 9.6449E-06 1 28002 103.44 39.336 1 0.95243 0.75934 0 9606800 4961100 4645600 15269 1470 5813 5947 23789 23789 1186 HLQDLMEGLTAK 12 1 0 Oxidation (M) _HLQDLM(ox)EGLTAK_ HLQDLM(1)EGLTAK HLQDLM(44.6)EGLTAK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.3514 2 686.350477 1370.6864 73306.78 0.63194 0.00043373 0.10149 6.9655E-05 0.73342 0.00050338 686.350382770906 690.357964938093 94.198 1.4759 94.198 93.744 95.22 0 294 98 5 0 0 0 0.0063049 1 52550 44.598 8.0834 1 1.7804 1.4254 0 7236100 2702400 4533700 15270 1470 5813 5947 23790 23790 1186 HLQDLMEGLTAK 12 1 0 Oxidation (M) _HLQDLM(ox)EGLTAK_ HLQDLM(1)EGLTAK HLQDLM(94.4)EGLTAK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.3573 2 686.350477 1370.6864 71902.58 0.44317 0.00030417 -0.16968 -0.00011646 0.27349 0.00018771 686.350451354964 690.357512314018 55.159 0.84937 55.159 54.803 55.652 0 318 53 7 0 0 0 5.9931E-05 2 26941 94.402 22.878 1 0.99483 0.81703 0 9417500 4665200 4752300 15271 1470 5813 5947 23791;23792 23792 1186 HLQDLMEGLTAK 12 1 0 Oxidation (M) _HLQDLM(ox)EGLTAK_ HLQDLM(1)EGLTAK HLQDLM(70.68)EGLTAK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.3505 2 686.350477 1370.6864 72307.11 0.54486 0.00037397 0.14199 9.7454E-05 0.68685 0.00047142 686.350535061937 690.357754508338 56.01 1.8394 56.01 55.579 57.418 0 530 123 6 0 0 0 0.00022207 1 27398 70.685 16.198 1 0.96057 0.78834 0 9107100 4424200 4682900 15272 1470 5813 5947 23793 23793 1186 HLQDLMEGLTAK 12 1 0 Unmodified _HLQDLMEGLTAK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.3531 2 678.353019 1354.69149 72041.65 0.68332 0.00046353 -0.51298 -0.00034798 0.17035 0.00011556 678.353281635565 682.359328177242 94.209 1.8631 94.209 93.744 95.607 0 513 125 7 0 0 0 1.0247E-12 3 52757 131.17 39.623 1 1.5353 1.1957 0 15647000 6251400 9395300 15273 1470 5813 5948 23794;23795;23796 23795 HLQDLMEGLTAK 12 1 0 Unmodified _HLQDLMEGLTAK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.3548 2 678.353019 1354.69149 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.136 1 94.136 93.636 94.636 0 0 0 0 4.2642E-16 1 51806 122.33 41.62 1 15274 1470 5813 5948 23797 23797 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7665 2 425.766512 849.518471 91242.6 -0.009543 -4.0631E-06 -0.39068 -0.00016634 -0.40023 -0.0001704 425.766810261255 430.770329589738 44.913 0.17757 44.913 44.799 44.977 0 110 16 7 0 0 0 3.629E-05 2 24166 150.07 52.428 1 0.72581 0.86723 0 4793400000 2798700000 1994700000 15275 312;832;1462;1487 5814 5949 23798;23799 23798 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7666 2 425.766512 849.518471 91097.29 -0.39534 -0.00016832 -0.50354 -0.00021439 -0.89888 -0.00038271 425.766695942859 430.770222243573 45.65 0.25626 45.65 45.578 45.834 0 90 21 10 0 0 0 0.016896 1 24611 97.596 19.652 1 0.67917 0.81047 0 3376700000 2024200000 1352500000 15276 312;832;1462;1487 5814 5949 23800 23800 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7699 2 425.766512 849.518471 90952.43 -0.34454 -0.00014669 -0.63536 -0.00027052 -0.9799 -0.00041721 425.766718386907 430.770092999578 45.737 0.1295 45.737 45.694 45.823 0 66 10 9 0 0 0 0.027069 1 24612 86.866 17.434 1 0.6927 0.82633 0 3074900000 1807800000 1267100000 15277 312;832;1462;1487 5814 5949 23801 23801 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7661 2 425.766512 849.518471 90952.45 0.23891 0.00010172 -0.46216 -0.00019677 -0.22324 -9.5049E-05 425.766351263797 430.770397698404 46.351 0.47299 46.351 46.232 46.705 0 305 38 9 0 0 0 0.0085438 2 25099 127.66 43.633 1 0.69565 0.82707 0 1217100000 696440000 520710000 15278 312;832;1462;1487 5814 5949 23802;23803 23802 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7665 2 425.766512 849.518471 92618.26 0.084615 3.6026E-05 0.050861 2.1655E-05 0.13548 5.7681E-05 425.766412136667 430.770589773914 47.933 0.32523 47.933 47.782 48.107 0 191 28 8 0 0 0 2.5674E-11 2 26072 170.43 54.434 1 0.69816 0.82609 0 324250000 190390000 133860000 15279 312;832;1462;1487 5814 5949 23804;23805 23804 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7678 2 425.766512 849.518471 92383.4 0.11477 4.8864E-05 -0.032365 -1.378E-05 0.082402 3.5084E-05 425.766431347712 430.770660085463 50.726 0.19819 50.726 50.657 50.855 0 86 17 6 0 0 0 0.020617 1 27985 93.885 29.609 1 1.241 1.3878 0 87878000 39282000 48596000 15280 312;832;1462;1487 5814 5949 23806 23806 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7704 2 425.766512 849.518471 92434 -0.33559 -0.00014288 -1.3792 -0.00058723 -1.7148 -0.00073012 425.76538998934 430.770162572823 50.899 0.55595 50.899 50.771 51.327 0 105 50 5 0 0 0 0.022187 1 28264 92.319 29.981 1 3.0588 3.3149 0 49621000 12236000 37386000 15281 312;832;1462;1487 5814 5949 23807 23807 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7666 2 425.766512 849.518471 92434.16 0.12783 5.4424E-05 0.38865 0.00016547 0.51648 0.0002199 425.766576871858 430.770682635656 53.426 1.02 53.426 53.178 54.198 0 196 79 5 0 0 0 0.0022594 2 29774 136.08 44.987 1 0.69092 0.76562 0 64508000 39749000 24759000 15282 312;832;1462;1487 5814 5949 23808;23809 23808 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7659 2 425.766512 849.518471 92101.74 0.12209 5.1982E-05 -0.6038 -0.00025708 -0.4817 -0.00020509 425.766021052402 430.770483086671 56.648 2.0927 56.648 55.931 58.024 -3.8147E-06 375 172 4 0 0 0 0.010149 2 31559 120.86 49.992 1 0.73868 0.74827 0 28325000 15285000 13040000 15283 312;832;1462;1487 5814 5949 23810;23811 23810 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7666 2 425.766512 849.518471 95410.63 -0.037897 -1.6135E-05 0.19822 8.4394E-05 0.16032 6.8259E-05 425.766424873388 430.770722008852 76.599 0.71814 76.599 76.239 76.957 0 123 60 4 0 0 0 0.034932 1 45110 61.997 7.4604 1 0.69745 0.70842 0 7535200 5078100 2457100 15284 312;832;1462;1487 5814 5949 23812 23812 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7666 2 425.766512 849.518471 94962.48 0.23016 9.7993E-05 0.73323 0.00031218 0.96338 0.00041018 425.766633404003 430.770898482816 85.403 0.29671 85.403 85.296 85.592 0 45 22 4 0 0 0 0.042191 1 51279 58.661 10.419 1 0.68441 0.70784 0 10309000 5841200 4468200 15285 312;832;1462;1487 5814 5949 23813 23813 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7667 2 425.766512 849.518471 93933.6 0.21034 8.9557E-05 0.013453 5.7279E-06 0.2238 9.5285E-05 425.766414080481 430.770577694307 100.65 0.7274 100.65 100.15 100.88 0 144 57 4 0 0 0 0.036835 1 61751 61.123 14.077 1 0.68436 0.70404 0 10169000 4721900 5446700 15286 312;832;1462;1487 5814 5949 23814 23814 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN -0.1448 -6.165E-05 NaN NaN NaN NaN 43.314 0.96545 43.314 42.579 43.545 0 0 0 0 1.4324E-18 2 22706 160.17 52.618 1 NaN NaN 0 6814500000 6814500000 0 15287 312;832;1462;1487 5814 5949 23815;23816 23815 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7668 2 425.766512 849.518471 NaN NaN NaN 0.10429 4.4403E-05 NaN NaN NaN NaN 52.367 0.83871 52.367 51.796 52.635 0 0 0 0 0.031091 1 29198 69.234 8.111 1 NaN NaN 0 49693000 49693000 0 15288 312;832;1462;1487 5814 5949 23817 23817 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7704 2 425.766512 849.518471 NaN NaN NaN -1.1613 -0.00049445 NaN NaN NaN NaN 55.341 0.16053 55.341 55.285 55.446 0 0 0 0 0.03244 1 31095 66.994 8.3328 1 NaN NaN 0 15539000 0 15539000 15289 312;832;1462;1487 5814 5949 23818 23818 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.766 2 425.766512 849.518471 NaN NaN NaN 0.24895 0.00010599 NaN NaN NaN NaN 65.7 1.4511 65.7 65.53 66.981 -7.6294E-06 0 0 0 0.032107 2 37858 74.439 14.829 1 NaN NaN 0 9271000 9271000 0 15290 312;832;1462;1487 5814 5949 23819;23820 23819 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7705 2 425.766512 849.518471 NaN NaN NaN 0.22324 9.5046E-05 NaN NaN NaN NaN 71.129 0.59901 71.129 70.662 71.261 0 0 0 0 0.03113 1 41370 69.432 13.406 1 NaN NaN 0 5529100 0 5529100 15291 312;832;1462;1487 5814 5949 23821 23821 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7704 2 425.766512 849.518471 NaN NaN NaN 0.27488 0.00011703 NaN NaN NaN NaN 72.564 0.74855 72.564 72.158 72.907 0 0 0 0 0.03113 1 42495 69.432 17.201 1 NaN NaN 0 6132000 0 6132000 15292 312;832;1462;1487 5814 5949 23822 23822 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7665 2 425.766512 849.518471 NaN NaN NaN 0.73184 0.00031159 NaN NaN NaN NaN 83.403 0.15922 83.403 83.333 83.492 0 0 0 0 0.03466 1 49956 65.897 16.687 1 NaN NaN 0 3602400 3602400 0 15293 312;832;1462;1487 5814 5949 23823 23823 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN 0.24867 0.00010587 NaN NaN NaN NaN 86.301 0.39625 86.301 86.08 86.476 -7.6294E-06 0 0 0 0.047335 1 52013 59.641 3.1307 1 NaN NaN 0 6656600 6656600 0 15294 312;832;1462;1487 5814 5949 23824 23824 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN -0.1214 -5.1687E-05 NaN NaN NaN NaN 86.579 0.61774 86.579 86.452 87.069 0 0 0 0 0.050161 1 52232 58.246 1.7357 1 NaN NaN 0 4803500 4803500 0 15295 312;832;1462;1487 5814 5949 23825 23825 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7658 2 425.766512 849.518471 NaN NaN NaN 0.15813 6.7329E-05 NaN NaN NaN NaN 88.621 0.33806 88.621 88.437 88.776 0 0 0 0 0.035946 1 53347 65.263 6.7113 1 NaN NaN 0 2989500 2989500 0 15296 312;832;1462;1487 5814 5949 23826 23826 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7666 2 425.766512 849.518471 NaN NaN NaN 0.35145 0.00014964 NaN NaN NaN NaN 89.814 0.075821 89.814 89.76 89.836 7.6294E-06 0 0 0 0.044333 1 54188 61.123 7.6011 1 NaN NaN 0 1974200 1974200 0 15297 312;832;1462;1487 5814 5949 23827 23827 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7665 2 425.766512 849.518471 NaN NaN NaN -0.14076 -5.9932E-05 NaN NaN NaN NaN 93.642 0.28444 93.642 93.432 93.716 -7.6294E-06 0 0 0 0.031091 1 56801 69.234 10.573 1 NaN NaN 0 7660800 7660800 0 15298 312;832;1462;1487 5814 5949 23828 23828 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7712 2 425.766512 849.518471 NaN NaN NaN 0.32893 0.00014005 NaN NaN NaN NaN 95.861 0.22124 95.861 95.794 96.016 7.6294E-06 0 0 0 0.053677 1 58404 56.51 8.2684 1 NaN NaN 0 2886700 0 2886700 15299 312;832;1462;1487 5814 5949 23829 23829 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7665 2 425.766512 849.518471 NaN NaN NaN 0.052529 2.2365E-05 NaN NaN NaN NaN 96.899 0.38051 96.899 96.797 97.178 0 0 0 0 0.041107 1 59058 62.715 6.689 1 NaN NaN 0 2187100 2187100 0 15300 312;832;1462;1487 5814 5949 23830 23830 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN -0.29141 -0.00012407 NaN NaN NaN NaN 98.953 0.33432 98.953 98.671 99.006 7.6294E-06 0 0 0 0.042562 1 60542 61.997 2.3881 1 NaN NaN 0 2285900 2285900 0 15301 312;832;1462;1487 5814 5949 23831 23831 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7711 2 425.766512 849.518471 NaN NaN NaN 0.34894 0.00014857 NaN NaN NaN NaN 99.99 0.16809 99.99 99.871 100.04 0 0 0 0 0.053677 1 61205 56.51 8.2684 1 NaN NaN 0 2835300 0 2835300 15302 312;832;1462;1487 5814 5949 23832 23832 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7667 2 425.766512 849.518471 NaN NaN NaN -0.0059784 -2.5454E-06 NaN NaN NaN NaN 101.45 0.25452 101.45 101.34 101.59 0 0 0 0 0.030857 1 62330 68.033 9.4817 1 NaN NaN 0 2180500 2180500 0 15303 312;832;1462;1487 5814 5949 23833 23833 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7668 2 425.766512 849.518471 NaN NaN NaN -0.12426 -5.2906E-05 NaN NaN NaN NaN 105.48 0.62724 105.48 105.26 105.89 7.6294E-06 0 0 0 0.051746 1 65324 57.463 0.95329 1 NaN NaN 0 4039100 4039100 0 15304 312;832;1462;1487 5814 5949 23834 23834 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN -0.1814 -7.7236E-05 NaN NaN NaN NaN 145.3 1.1176 145.3 145.26 146.38 0 0 0 0 1.7972E-27 1 91336 177.57 70.015 1 NaN NaN 0 73481000 73481000 0 15305 312;832;1462;1487 5814 5949 23835 23835 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7667 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.721 1 48.721 48.221 49.221 0 0 0 0 0.034306 1 26621 72.021 10.023 1 15306 312;832;1462;1487 5814 5949 23836 23836 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7663 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.717 1 57.717 57.217 58.217 0 0 0 0 0.023293 1 32650 77.374 18.713 1 15307 312;832;1462;1487 5814 5949 23837 23837 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7706 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.057 1 59.057 58.557 59.557 0 0 0 0 0.047701 1 33576 67.035 16.915 1 15308 312;832;1462;1487 5814 5949 23838 23838 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7705 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.598 1 60.598 60.098 61.098 -3.8147E-06 0 0 0 0.01505 1 34585 81.381 25.355 1 15309 312;832;1462;1487 5814 5949 23839 23839 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7666 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.269 1 70.269 69.769 70.769 0 0 0 0 0.053226 1 40870 65.263 18.218 1 15310 312;832;1462;1487 5814 5949 23840 23840 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.678 1 73.678 73.178 74.178 0 0 0 0 0.040227 1 43215 69.432 17.201 1 15311 312;832;1462;1487 5814 5949 23841 23841 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7662 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.13 1 88.13 87.63 88.63 0 0 0 0 0.019588 1 53132 96.666 27.276 1 15312 312;832;1462;1487 5814 5949 23842 23842 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7702 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.472 1 88.472 87.972 88.972 0 0 0 0 0.04783 1 53338 66.994 10.483 1 15313 312;832;1462;1487 5814 5949 23843 23843 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7705 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.838 1 91.838 91.338 92.338 7.6294E-06 0 0 0 0.047701 1 55645 67.035 10.525 1 15314 312;832;1462;1487 5814 5949 23844 23844 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7668 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.502 1 92.502 92.002 93.002 0 0 0 0 0.051247 1 56059 65.897 14.861 1 15315 312;832;1462;1487 5814 5949 23845 23845 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7672 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.439 1 94.439 93.939 94.939 0 0 0 0 0.017115 1 57364 80.377 21.717 1 15316 312;832;1462;1487 5814 5949 23846 23846 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7666 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.128 1 98.128 97.628 98.628 0 0 0 0 0.053226 1 59951 65.263 8.7526 1 15317 312;832;1462;1487 5814 5949 23847 23847 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7705 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.12 1 101.12 100.62 101.62 0 0 0 0 0.034306 1 62086 72.021 13.36 1 15318 312;832;1462;1487 5814 5949 23848 23848 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7712 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.52 1 101.52 101.02 102.02 0 0 0 0 0.04783 1 62395 66.994 8.3328 1 15319 312;832;1462;1487 5814 5949 23849 23849 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7663 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.93 1 103.93 103.43 104.43 7.6294E-06 0 0 0 0.053226 1 64163 65.263 13.032 1 15320 312;832;1462;1487 5814 5949 23850 23850 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7661 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.23 1 110.23 109.73 110.73 0 0 0 0 0.04036 1 69192 69.39 10.729 1 15321 312;832;1462;1487 5814 5949 23851 23851 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7704 2 425.766512 849.518471 90901.98 -0.0063487 -2.7031E-06 -0.63722 -0.00027131 -0.64357 -0.00027401 425.766429035774 430.770324262622 42.849 0.37426 42.849 42.743 43.117 0 222 29 9 0 0 0 0.014567 1 23325 99.919 19.542 1 0.72985 0.87168 0 3370100000 1932100000 1438000000 15322 312;832;1462;1487 5814 5949 23852 23852 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7704 2 425.766512 849.518471 90901.99 0.23892 0.00010173 -0.45351 -0.00019309 -0.21459 -9.1366E-05 425.766383969912 430.770394346957 43.312 0.70723 43.312 43.176 43.883 0 407 56 9 0 0 0 0.022924 1 23868 91.584 22.195 1 0.73042 0.86647 0 1949300000 1099500000 849780000 15323 312;832;1462;1487 5814 5949 23853 23853 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 90944.66 0.25355 0.00010795 0.16254 6.9203E-05 0.41609 0.00017716 425.766590328255 430.770670735912 44.38 0.80901 44.38 43.868 44.677 0 270 71 8 0 0 0 0.0037229 2 24379 134.12 33.846 1 0.72888 0.85416 0 728120000 391930000 336190000 15324 312;832;1462;1487 5814 5949 23854;23855 23855 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 91417.65 -0.063774 -2.7153E-05 0.19715 8.3942E-05 0.13338 5.6789E-05 425.766498400846 430.770613468471 45.271 0.48094 45.271 44.986 45.467 0 212 41 8 0 0 0 0.0038476 2 24875 133.95 48.891 1 0.72376 0.84111 0 371170000 221790000 149380000 15325 312;832;1462;1487 5814 5949 23856;23857 23857 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 92358.98 0.023983 1.0211E-05 0.2773 0.00011807 0.30129 0.00012828 425.766573377666 430.770643680128 46.175 1.3502 46.175 45.99 47.34 0 426 109 7 0 0 0 4.7228E-07 2 25498 159.75 62.11 1 0.70824 0.82044 0 287050000 157970000 129080000 15326 312;832;1462;1487 5814 5949 23858;23859 23859 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7666 2 425.766512 849.518471 92188.89 -0.13518 -5.7554E-05 0.00094184 4.01E-07 -0.13424 -5.7153E-05 425.766595083745 430.770711505246 47.474 0.70351 47.474 47.168 47.871 0 198 49 7 0 0 0 0.011733 2 26674 107.55 39.519 1 0.65946 0.75483 0 164400000 96713000 67686000 15327 312;832;1462;1487 5814 5949 23860;23861 23861 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7665 2 425.766512 849.518471 92540.02 0.1349 5.7435E-05 0.31099 0.00013241 0.44589 0.00018984 425.766597972578 430.770769280172 48.369 0.89548 48.369 47.852 48.748 -3.8147E-06 310 63 6 0 0 0 0.02357 1 27226 90.939 9.223 1 0.70521 0.80188 0 120200000 65310000 54893000 15328 312;832;1462;1487 5814 5949 23862 23862 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7668 2 425.766512 849.518471 92019.51 0.043312 1.8441E-05 0.53538 0.00022795 0.5787 0.00024639 425.766746286552 430.770750919642 50.967 1.056 50.967 50.432 51.488 0 220 85 5 0 0 0 0.01383 1 28815 101.72 33.324 1 0.80239 0.93052 0 58231000 34628000 23603000 15329 312;832;1462;1487 5814 5949 23863 23863 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.767 2 425.766512 849.518471 93075.78 -0.11616 -4.9459E-05 0.060885 2.5923E-05 -0.055278 -2.3536E-05 425.766355942403 430.7705558875 52.541 1.9372 52.541 51.843 53.78 0 419 163 4 0 0 0 0.012554 2 29910 105.27 24.891 1 0.70403 0.8068 0 51294000 26381000 24913000 15330 312;832;1462;1487 5814 5949 23864;23865 23864 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7657 2 425.766512 849.518471 92003.91 -0.18671 -7.9493E-05 -0.30499 -0.00012985 -0.49169 -0.00020935 425.766191801085 430.770474914099 55.59 1.8297 55.59 54.623 56.453 3.8147E-06 463 143 4 0 0 0 0.012554 3 31315 105.27 37.236 1 0.6863 0.74159 0 26748000 15156000 11593000 15331 312;832;1462;1487 5814 5949 23866;23867;23868 23866 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 92003.98 -0.049907 -2.1249E-05 0.46123 0.00019638 0.41132 0.00017513 425.766474463153 430.770480702093 56.703 1.7213 56.703 56.08 57.802 3.8147E-06 295 131 4 0 0 0 0.026788 2 33273 78.994 16.656 1 0.68638 0.7309 0 24396000 14957000 9439200 15332 312;832;1462;1487 5814 5949 23869;23870 23870 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7663 2 425.766512 849.518471 94043.59 -0.063409 -2.6997E-05 0.1571 6.6888E-05 0.093693 3.9891E-05 425.766497897246 430.770708436826 70.031 1.3859 70.031 69.387 70.773 -7.6294E-06 281 114 5 0 0 0 0.030029 1 41566 69.39 10.729 1 0.66335 0.66337 0 16970000 9772600 7197500 15333 312;832;1462;1487 5814 5949 23871 23871 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7671 2 425.766512 849.518471 95422.91 0.074003 3.1508E-05 0.44796 0.00019073 0.52196 0.00022223 425.766546685972 430.770710279699 84.104 0.39532 84.104 83.967 84.362 0 94 31 4 0 0 0 0.030029 1 51613 69.39 10.729 1 0.60737 0.61393 0 9818200 5726700 4091500 15334 312;832;1462;1487 5814 5949 23872 23872 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7707 2 425.766512 849.518471 96137.63 0.18811 8.0091E-05 0.06208 2.6432E-05 0.25019 0.00010652 425.766329291627 430.770634720922 117.94 0.26873 117.94 117.81 118.08 0 30 19 4 0 0 0 0.03153 1 77548 66.994 8.3328 1 0.34755 0.36976 0 3694700 2392700 1302000 15335 312;832;1462;1487 5814 5949 23873 23873 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7672 2 425.766512 849.518471 NaN NaN NaN 0.045949 1.9564E-05 NaN NaN NaN NaN 41.286 0.65734 41.286 41.197 41.855 -3.8147E-06 0 0 0 3.3745E-12 1 22342 153.61 46.061 1 NaN NaN 0 9887000000 9887000000 0 15336 312;832;1462;1487 5814 5949 23874 23874 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7666 2 425.766512 849.518471 NaN NaN NaN -0.33255 -0.00014159 NaN NaN NaN NaN 41.763 1.0952 41.763 41.697 42.792 -3.8147E-06 0 0 0 8.0047E-12 1 22801 150.07 59.129 1 NaN NaN 0 8662500000 8662500000 0 15337 312;832;1462;1487 5814 5949 23875 23875 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7677 2 425.766512 849.518471 NaN NaN NaN 0.18387 7.8284E-05 NaN NaN NaN NaN 49.444 0.5784 49.444 49.205 49.784 0 0 0 0 0.00022265 1 27761 126.16 53.538 1 NaN NaN 0 43331000 43331000 0 15338 312;832;1462;1487 5814 5949 23876 23876 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7703 2 425.766512 849.518471 NaN NaN NaN -1.071 -0.00045601 NaN NaN NaN NaN 49.633 0.28011 49.633 49.572 49.852 0 0 0 0 0.032278 1 28044 75.311 18.8 1 NaN NaN 0 28078000 0 28078000 15339 312;832;1462;1487 5814 5949 23877 23877 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7666 2 425.766512 849.518471 NaN NaN NaN 0.06739 2.8692E-05 NaN NaN NaN NaN 51.549 0.63548 51.549 51.315 51.951 0 0 0 0 0.00055207 1 29355 119.06 42.712 1 NaN NaN 0 35647000 35647000 0 15340 312;832;1462;1487 5814 5949 23878 23878 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7665 2 425.766512 849.518471 NaN NaN NaN 0.29808 0.00012691 NaN NaN NaN NaN 65.16 0.25183 65.16 65.084 65.336 0 0 0 0 0.029421 1 38427 86.838 27.197 1 NaN NaN 0 5456300 5456300 0 15341 312;832;1462;1487 5814 5949 23879 23879 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7665 2 425.766512 849.518471 NaN NaN NaN 0.42275 0.00017999 NaN NaN NaN NaN 65.832 1.1475 65.832 65.241 66.388 0 0 0 0 0.03244 1 38934 66.994 8.3328 1 NaN NaN 0 6622300 6622300 0 15342 312;832;1462;1487 5814 5949 23880 23880 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7703 2 425.766512 849.518471 NaN NaN NaN 0.32815 0.00013972 NaN NaN NaN NaN 74.427 0.35658 74.427 74.139 74.496 0 0 0 0 0.03244 2 44758 66.994 10.419 1 NaN NaN 0 4645100 0 4645100 15343 312;832;1462;1487 5814 5949 23881;23882 23882 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7663 2 425.766512 849.518471 NaN NaN NaN 0.62206 0.00026485 NaN NaN NaN NaN 80.681 0.40004 80.681 80.416 80.816 0 0 0 0 0.040574 1 49210 62.978 3.3693 1 NaN NaN 0 10609000 10609000 0 15344 312;832;1462;1487 5814 5949 23883 23883 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN 0.15056 6.4103E-05 NaN NaN NaN NaN 82.305 0.45766 82.305 82.153 82.611 0 0 0 0 0.035946 2 50357 65.263 11.553 1 NaN NaN 0 4916600 4916600 0 15345 312;832;1462;1487 5814 5949 23884;23885 23884 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7707 2 425.766512 849.518471 NaN NaN NaN 0.12265 5.2221E-05 NaN NaN NaN NaN 83.46 0.23091 83.46 83.325 83.556 0 0 0 0 0.049321 1 51196 58.661 10.419 1 NaN NaN 0 2545500 0 2545500 15346 312;832;1462;1487 5814 5949 23886 23886 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7667 2 425.766512 849.518471 NaN NaN NaN 0.13698 5.8322E-05 NaN NaN NaN NaN 85.568 0.52824 85.568 85.42 85.948 0 0 0 0 0.031486 1 52780 71.258 14.747 1 NaN NaN 0 6281900 6281900 0 15347 312;832;1462;1487 5814 5949 23887 23887 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN 0.056084 2.3879E-05 NaN NaN NaN NaN 87.801 0.82765 87.801 87.268 88.096 0 0 0 0 0.031091 2 53879 69.39 10.729 1 NaN NaN 0 4589400 4589400 0 15348 312;832;1462;1487 5814 5949 23888;23889 23889 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7663 2 425.766512 849.518471 NaN NaN NaN 0.8168 0.00034777 NaN NaN NaN NaN 91.539 0.57909 91.539 91.276 91.855 0 0 0 0 0.042562 1 56782 61.997 9.7661 1 NaN NaN 0 5177400 5177400 0 15349 312;832;1462;1487 5814 5949 23890 23890 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7668 2 425.766512 849.518471 NaN NaN NaN -0.25691 -0.00010938 NaN NaN NaN NaN 93.838 0.42104 93.838 93.727 94.148 0 0 0 0 0.03244 1 58470 66.994 8.3328 1 NaN NaN 0 5270200 5270200 0 15350 312;832;1462;1487 5814 5949 23891 23891 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7657 2 425.766512 849.518471 NaN NaN NaN -0.33219 -0.00014144 NaN NaN NaN NaN 95.954 0.35545 95.954 95.708 96.064 -7.6294E-06 0 0 0 0.031486 1 59848 71.258 15.232 1 NaN NaN 0 4186500 4186500 0 15351 312;832;1462;1487 5814 5949 23892 23892 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7667 2 425.766512 849.518471 NaN NaN NaN 0.075273 3.2049E-05 NaN NaN NaN NaN 102.71 0.89209 102.71 102.28 103.17 0 0 0 0 0.031486 1 64769 71.258 12.597 1 NaN NaN 0 6067700 6067700 0 15352 312;832;1462;1487 5814 5949 23893 23893 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7663 2 425.766512 849.518471 NaN NaN NaN -0.021647 -9.2164E-06 NaN NaN NaN NaN 105.95 0.44451 105.95 105.66 106.1 0 0 0 0 0.03244 1 67190 66.994 8.3328 1 NaN NaN 0 3623900 3623900 0 15353 312;832;1462;1487 5814 5949 23894 23894 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7667 2 425.766512 849.518471 NaN NaN NaN -0.12607 -5.3678E-05 NaN NaN NaN NaN 111.07 0.63844 111.07 110.69 111.33 7.6294E-06 0 0 0 0.049321 1 71680 58.661 2.1506 1 NaN NaN 0 1485100 1485100 0 15354 312;832;1462;1487 5814 5949 23895 23895 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7659 2 425.766512 849.518471 NaN NaN NaN -0.31358 -0.00013351 NaN NaN NaN NaN 113.48 0.48315 113.48 113.26 113.74 -7.6294E-06 0 0 0 0.049321 1 73579 58.661 2.1506 1 NaN NaN 0 2274600 2274600 0 15355 312;832;1462;1487 5814 5949 23896 23896 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.767 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.836 1 43.836 43.336 44.336 0 0 0 0 8.4915E-08 1 23880 151.14 57.257 1 15356 312;832;1462;1487 5814 5949 23897 23897 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.616 1 64.616 64.116 65.116 0 0 0 0 0.014537 1 38046 86.121 26.326 1 15357 312;832;1462;1487 5814 5949 23898 23898 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7705 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.84 1 64.84 64.34 65.34 0 0 0 0 0.034453 1 38200 71.949 15.923 1 15358 312;832;1462;1487 5814 5949 23899 23899 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7666 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.277 1 75.277 74.777 75.777 0 0 0 0 0.04345 1 45351 68.398 6.0599 1 15359 312;832;1462;1487 5814 5949 23900 23900 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.766 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.52 1 86.52 86.02 87.02 7.6294E-06 0 0 0 0.021091 1 53332 78.445 21.935 1 15360 312;832;1462;1487 5814 5949 23901 23901 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7677 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.496 1 88.496 87.996 88.996 0 0 0 0 0.016749 1 54579 80.555 15.992 1 15361 312;832;1462;1487 5814 5949 23902 23902 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7662 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.656 1 95.656 95.156 96.156 0 0 0 0 0.04783 1 59574 66.994 10.483 1 15362 312;832;1462;1487 5814 5949 23903 23903 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7706 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.285 1 98.285 97.785 98.785 0 0 0 0 0.04036 1 61476 69.39 10.729 1 15363 312;832;1462;1487 5814 5949 23904 23904 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7665 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.57 1 116.57 116.07 117.07 -7.6294E-06 0 0 0 0.053226 1 76304 65.263 8.7526 1 15364 312;832;1462;1487 5814 5949 23905 23905 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.7665 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.69 1 131.69 131.19 132.19 0 0 0 0 0.04036 1 88140 69.39 10.729 1 15365 312;832;1462;1487 5814 5949 23906 23906 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 430.7704 2 425.766512 849.518471 NaN NaN NaN 0.18383 7.8268E-05 NaN NaN NaN NaN 63.443 4.6145 63.443 60.41 65.024 0 0 0 0 0.03113 3 31561 72.021 17.201 1 NaN NaN 0 14970000 0 14970000 15366 312;832;1462;1487 5814 5949 23907;23908;23909 23907 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 425.7662 2 425.766512 849.518471 NaN NaN NaN 0.40559 0.00017268 NaN NaN NaN NaN 74.779 1.9105 74.779 73.273 75.184 0 0 0 0 0.047399 1 39546 59.609 12.564 1 NaN NaN 0 1480200 1480200 0 15367 312;832;1462;1487 5814 5949 23910 23910 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 430.77 2 425.766512 849.518471 90119.98 -0.65505 -0.0002789 -0.86341 -0.00036761 -1.5185 -0.00064651 425.767195843817 430.769772845346 47.985 13.434 47.985 47.253 60.687 -3.8147E-06 5797 1003 10 0 0 0 0.026656 31 23875 81.381 19.813 1 0.80175 0.70152 0 1665700000 921530000 744210000 15368 312;832;1462;1487 5814 5949 23911;23912;23913;23914;23915;23916;23917;23918;23919;23920;23921;23922;23923;23924;23925;23926;23927;23928;23929;23930;23931;23932;23933;23934;23935;23936;23937;23938;23939;23940;23941 23917 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 425.7668 2 425.766512 849.518471 92271.99 -0.49744 -0.00021179 0.68455 0.00029146 0.18711 7.9666E-05 425.766546583932 430.77081809093 60.927 3.7247 60.927 60.042 63.766 0 675 305 4 0 0 0 0.03065 6 31280 68.398 17.362 1 0.88969 0.7416 0 6789500 3268500 3521000 15369 312;832;1462;1487 5814 5949 23942;23943;23944;23945;23946;23947 23944 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 425.7662 2 425.766512 849.518471 92271.92 -0.59747 -0.00025438 -0.087511 -3.7259E-05 -0.68498 -0.00029164 425.766342216051 430.770398495978 64.087 2.2165 64.087 63.453 65.669 0 533 184 4 0 0 0 0.056179 2 32518 52.231 9.4579 1 0.81337 0.70607 0 4306400 2091200 2215100 15370 312;832;1462;1487 5814 5949 23948;23949 23949 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q71UI9;P0C0S5;C9J0D1;C9J386;Q96QV6;P16104 A3KPC7;B2R5B6;Q71UI9;Q96QV6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;H2AFV;H2AFZ;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 425.7665 2 425.766512 849.518471 94825.75 -0.08618 -3.6693E-05 0.3854 0.00016409 0.29922 0.0001274 425.766655149985 430.770661319255 145.39 0.67007 145.39 145.29 145.96 0 152 58 4 0 0 0 0.026804 1 84671 79.454 19.813 1 0.79908 0.70654 0 3916200 2087900 1828300 15371 312;832;1462;1487 5814 5949 23950 23950 HLQLAIRGDEELDSLIK 17 1 1 Unmodified _HLQLAIRGDEELDSLIK_ 0 0 1 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.7009 3 650.69334 1949.05819 74569.77 1.0129 0.00065906 -0.39075 -0.00025426 0.6221 0.0004048 650.693545941524 656.700389072224 112.13 0.61796 112.13 111.8 112.42 0 249 37 11 0 0 0 0.0027314 1 65045 34.395 34.395 1 0.95018 0.84872 0 73722000 38053000 35669000 15372 1462 5815 5950 23951 23951 HLQLAIRGDEELDSLIK 17 1 1 Unmodified _HLQLAIRGDEELDSLIK_ 0 0 1 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.0278 3 650.69334 1949.05819 74569.75 1.0301 0.00067028 -0.72762 -0.00047346 0.30248 0.00019682 651.02739950655 656.700588453295 112.36 0.37828 112.36 112.25 112.63 7.6294E-06 113 19 9 0 0 0 8.3242E-05 1 65234 51.727 45.612 1 0.8362 0.74566 0 67784000 35472000 32312000 15373 1462 5815 5950 23952 23952 HLQLAIRGDEELDSLIK 17 1 1 Unmodified _HLQLAIRGDEELDSLIK_ 0 0 1 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.0355 3 650.69334 1949.05819 74906.52 0.66593 0.00043332 -0.34255 -0.00022289 0.32338 0.00021042 650.693241598159 656.700586080584 111.8 1.1898 111.8 111.43 112.62 0 395 67 10 0 0 0 4.7542E-05 1 63757 59.728 49.815 1 0.93083 0.79778 0 161260000 85226000 76035000 15374 1462 5815 5950 23953 23953 HLQLAIRNDEELNK 14 1 1 Unmodified _HLQLAIRNDEELNK_ 0 0 1 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q96QV6;P16104 A3KPC7;B2R5B6;Q96QV6 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.9802 3 564.972437 1691.89548 80298.31 0.61692 0.00034854 -0.26978 -0.00015242 0.34714 0.00019612 564.972165520828 570.979792765811 56.468 0.81871 56.468 56.243 57.062 -3.8147E-06 261 51 7 0 0 0 0.0031901 2 28484 32.275 32.275 1 0.90523 0.75265 0 6004600 2794000 3210600 15375 312;832;1487 5816 5951 23954;23955 23955 HLQLAIRNDEELNK 14 1 1 Unmodified _HLQLAIRNDEELNK_ 0 0 1 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;B2R5B6;Q96QV6;P16104 A3KPC7;B2R5B6;Q96QV6 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.3141 3 564.972437 1691.89548 81635.62 0.56996 0.00032201 -0.097308 -5.4976E-05 0.47265 0.00026704 564.972271380497 570.979915809546 56.433 1.0314 56.433 56.181 57.212 0 341 70 8 0 0 0 0.046449 1 27773 13.865 13.865 1 0.99992 0.84378 0 3823300 2008900 1814400 15376 312;832;1487 5816 5951 23956 23956 HLQLAVR 7 0 1 Unmodified _HLQLAVR_ 0 0 0 Q8IUE6;A2RUA4 Q8IUE6 Q8IUE6 HIST2H2AB Histone H2A type 2-B;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.7592 2 418.758687 835.502821 91613.86 0.050425 2.1116E-05 -0.49691 -0.00020808 -0.44648 -0.00018697 418.75861755219 423.762358403121 34.524 2.7125 34.524 33.08 35.793 0 885 249 9 0 0 0 0.0038476 4 16997 133.95 48.891 1 0.90721 1.0801 0 1803300000 937640000 865710000 15377 1890 5817 5952 23957;23958;23959;23960 23958 HLQLAVR 7 0 1 Unmodified _HLQLAVR_ 0 0 0 Q8IUE6;A2RUA4 Q8IUE6 Q8IUE6 HIST2H2AB Histone H2A type 2-B;Histone H2A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.7575 2 418.758687 835.502821 NaN NaN NaN -0.069089 -2.8932E-05 NaN NaN NaN NaN 36.567 0.25809 36.567 36.441 36.699 0 0 0 0 0.047335 1 18447 59.641 9.5213 1 NaN NaN 0 9298300 9298300 0 15378 1890 5817 5952 23961 23961 HLQLAVR 7 0 1 Unmodified _HLQLAVR_ 0 0 0 Q8IUE6;A2RUA4 Q8IUE6 Q8IUE6 HIST2H2AB Histone H2A type 2-B;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.7584 2 418.758687 835.502821 92487.9 0.27033 0.0001132 -0.67066 -0.00028085 -0.40033 -0.00016764 418.758439935261 423.762364934543 32.32 2.363 32.32 31.813 34.176 0 777 209 8 0 0 0 4.148E-07 3 16058 160.17 52.618 1 0.82942 0.9716 0 705340000 379590000 325750000 15379 1890 5817 5952 23962;23963;23964 23963 HLQLAVR 7 0 1 Unmodified _HLQLAVR_ 0 0 0 Q8IUE6;A2RUA4 Q8IUE6 Q8IUE6 HIST2H2AB Histone H2A type 2-B;Histone H2A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.7595 2 418.758687 835.502821 NaN NaN NaN -0.084248 -3.528E-05 NaN NaN NaN NaN 31.619 0.43955 31.619 31.474 31.914 0 0 0 0 4.8891E-07 1 15622 134.12 43.026 1 NaN NaN 0 418390000 418390000 0 15380 1890 5817 5952 23965 23965 HLQLAVR 7 0 1 Unmodified _HLQLAVR_ 0 0 0 Q8IUE6;A2RUA4 Q8IUE6 Q8IUE6 HIST2H2AB Histone H2A type 2-B;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 418.7587 2 418.758687 835.502821 93158.97 -0.42717 -0.00017888 -0.15488 -6.4859E-05 -0.58205 -0.00024374 418.758705697236 423.762378034708 36.686 1.4533 36.686 36.141 37.595 0 502 124 7 0 0 0 0.026804 1 16642 79.454 19.813 1 0.81406 0.70025 0 49229000 26764000 22465000 15381 1890 5817 5952 23966 23966 HLQTGENHTSVDPR 14 0 1 Unmodified _HLQTGENHTSVDPR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.9252 3 530.925487 1589.75463 82062.39 -0.010765 -5.7155E-06 0.33336 0.00017699 0.32259 0.00017127 530.925626497226 534.261890872037 17.543 0.32479 17.543 17.434 17.758 1.9073E-06 56 12 7 0 0 0 2.9479E-05 2 4480 78.486 78.486 1 0.78819 0.78459 0 7953600 4600400 3353200 15382 1418 5818 5953 23967;23968 23968 HLQTGENHTSVDPR 14 0 1 Unmodified _HLQTGENHTSVDPR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.2594 3 530.925487 1589.75463 84649.61 -0.014521 -7.7093E-06 0.098472 5.2281E-05 0.083951 4.4572E-05 530.925578823557 534.260861213706 18.705 0.2052 18.705 18.589 18.794 0 54 12 6 0 0 0 0.052529 1 4211 12.146 5.565 1 0.71529 0.65348 0 653870 390780 263080 15383 1418 5818 5953 23969 23969 HLTDAYFK 8 1 0 Unmodified _HLTDAYFK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.7609 2 497.753267 993.491981 84721.7 0.30671 0.00015267 -0.037727 -1.8779E-05 0.26898 0.00013389 497.753380513662 501.760077562283 40.305 1.1475 40.305 40.013 41.161 0 432 98 9 0 0 0 0.00032234 2 20934 133.9 108.16 1 0.9945 1.1802 0 514330000 276000000 238330000 15384 342 5819 5954 23970;23971 23970 HLTDAYFK 8 1 0 Unmodified _HLTDAYFK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.7535 2 497.753267 993.491981 84518.45 0.17755 8.8375E-05 0.24995 0.00012441 0.4275 0.00021279 497.75346542173 501.760390977399 38.564 1.1959 38.564 38.233 39.428 0 461 103 7 0 0 0 9.4278E-09 2 20212 153.73 113.62 1 0.95558 1.1267 0 695300000 353480000 341820000 15385 342 5819 5954 23972;23973 23973 HLTDAYFK 8 1 0 Unmodified _HLTDAYFK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.7538 2 497.753267 993.491981 85145.41 0.17277 8.5994E-05 0.17231 8.5768E-05 0.34507 0.00017176 497.75336669437 501.760245622711 45.498 2.4528 45.498 45.14 47.593 0 799 180 12 0 0 0 0.0088675 3 21646 76.774 49.91 1 0.81061 0.68062 0 53039000 29870000 23169000 15386 342 5819 5954 23974;23975;23976 23974 HLTDAYFK 8 1 0 Unmodified _HLTDAYFK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.7537 2 497.753267 993.491981 85204.45 0.3828 0.00019054 -0.088375 -4.3989E-05 0.29442 0.00014655 497.753214218718 501.760177213067 45.171 1.8958 45.171 44.781 46.677 0 604 124 8 0 0 0 0.00098236 3 20932 120.46 89.845 1 0.7937 0.66687 0 49903000 26531000 23372000 15387 342 5819 5954 23977;23978;23979 23977 HLTGEFEK 8 1 0 Unmodified _HLTGEFEK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.7429 2 480.742899 959.471246 NaN NaN NaN 0.24134 0.00011602 NaN NaN NaN NaN 23.654 0.37884 23.654 23.507 23.885 0 0 0 0 6.0143E-21 1 9492 164.53 87.687 1 NaN NaN 0 28335000 28335000 0 15388 1082 5820 5955 23980 23980 HLTGEFEK 8 1 0 Unmodified _HLTGEFEK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7499 2 480.742899 959.471246 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.496 1 22.496 21.996 22.996 0 0 0 0 0.00021515 1 8493 113.5 45.078 1 15389 1082 5820 5955 23981 23981 HLTGEFEK 8 1 0 Unmodified _HLTGEFEK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.7499 2 480.742899 959.471246 NaN NaN NaN 0.21102 0.00010145 NaN NaN NaN NaN 24.757 0.88776 24.757 24.534 25.422 0 0 0 0 0.011527 1 8258 75.109 36.871 1 NaN NaN 0 3151700 0 3151700 15390 1082 5820 5955 23982 23982 HLTGEFEK 8 1 0 Unmodified _HLTGEFEK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.743 2 480.742899 959.471246 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.706 1 24.706 24.206 25.206 0 0 0 0 0.0050084 1 8296 86.833 43.018 1 15391 1082 5820 5955 23983 23983 HLTVPK 6 1 0 Unmodified _HLTVPK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 347.7156 2 347.715956 693.41736 101549.6 -0.26977 -9.3805E-05 0.27536 9.5747E-05 0.0055846 1.9419E-06 347.715945431416 351.723050143245 22.797 1.2671 22.797 22.575 23.842 0 169 59 7 0 0 0 0.060674 1 6993 91.584 0 1 1.3705 1.1013 0 16503000 7214100 9288700 15392 1942 5821 5956 23984 23984 HLTYNDFINK 10 1 0 Unmodified _HLTYNDFINK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.8201 2 632.81967 1263.62479 NaN NaN NaN -0.037896 -2.3981E-05 NaN NaN NaN NaN 56.931 0.69887 56.931 56.713 57.412 0 0 0 0 3.319E-08 1 32841 125.7 104.19 1 NaN NaN 0 12442000 12442000 0 15393 1679 5822 5957 23985 23985 HLTYNDFINK 10 1 0 Unmodified _HLTYNDFINK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.827 2 632.81967 1263.62479 76556.72 0.48479 0.00030678 0.23812 0.00015068 0.7229 0.00045747 632.819713356807 636.826733492186 67.976 0.89771 67.976 67.657 68.554 0 297 61 8 0 0 0 0.0024908 2 35351 68.847 56.611 1 1.0378 0.80513 0 14141000 6981700 7159500 15394 1679 5822 5957 23986;23987 23986 HLTYNDFINK 10 1 0 Unmodified _HLTYNDFINK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.8203 2 632.81967 1263.62479 76508.91 0.5062 0.00032033 0.034167 2.1622E-05 0.54036 0.00034195 632.819633708696 636.826700428047 68.255 0.83481 68.255 67.955 68.79 0 314 59 8 0 0 0 0.00032788 1 34777 89.886 74.735 1 1.0852 0.89533 0 11152000 4954800 6197300 15395 1679 5822 5957 23988 23988 HLVDEPQNLIK 11 1 0 Unmodified _HLVDEPQNLIK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.3627 2 653.361702 1304.70885 NaN NaN NaN 0.035505 2.3197E-05 NaN NaN NaN NaN 64.191 0.79669 64.191 63.862 64.659 0 0 0 0 7.8232E-17 1 36854 142 108.07 1 NaN NaN 0 10720000 10720000 0 + 15396 1153 5823 5958 23989 23989 HLVDEPQNLIK 11 1 0 Unmodified _HLVDEPQNLIK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3612 2 653.361702 1304.70885 NaN NaN NaN -0.40178 -0.00026251 NaN NaN NaN NaN 61.373 0.53242 61.373 61.09 61.622 0 0 0 0 0.0011644 1 35803 85.29 56.204 1 NaN NaN 0 8571500 8571500 0 + 15397 1153 5823 5958 23990 23990 HLVLAGGSK 9 1 0 Unmodified _HLVLAGGSK_ 0 0 0 B4E0Q4;B4DZJ7;O00267;B4DJK4 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 445.2709 2 441.263802 880.513051 NaN NaN NaN 0.18086 7.9805E-05 NaN NaN NaN NaN 22.531 0.3552 22.531 22.346 22.701 0 0 0 0 4.9492E-05 1 8549 104.44 61.437 1 NaN NaN 0 9064800 0 9064800 15398 1056 5824 5959 23991 23991 HLVMGDIPAAVNAFQEAASLLGK 23 1 0 Oxidation (M) _HLVM(ox)GDIPAAVNAFQEAASLLGK_ HLVM(1)GDIPAAVNAFQEAASLLGK HLVM(61.96)GDIPAAVNAFQEAASLLGK 0 1 0 Q53H03;P49321;E9PI86;O95138;Q5T626;Q6PJY7;E9PPQ8 Q53H03 Q53H03 NASP Nuclear autoantigenic sperm protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.0886 3 790.082499 2367.22567 68140.39 0.73656 0.00058194 0.13655 0.00010788 0.87311 0.00068983 790.082901830315 793.08825023516 133.24 0.30466 133.24 133.02 133.32 0 27 9 7 0 0 0 5.4536E-09 1 87240 61.963 54.159 1 6.0689 6.1573 0 13405000 2356300 11048000 15399 1579 5825 5960 23992 23992 1356 HLVVPGDTITTDTGFMR 17 0 1 Oxidation (M) _HLVVPGDTITTDTGFM(ox)R_ HLVVPGDTITTDTGFM(1)R HLVVPGDTITTDTGFM(57.29)R 0 1 0 Q13868;A3KFL5;A3KFL2;B4E001;A3KFL1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.3167 3 625.980492 1874.91965 76934.27 0.79115 0.00049524 0.085402 5.346E-05 0.87655 0.0005487 626.314916373342 629.316697444142 82.687 0.71569 82.687 82.154 82.87 0 162 60 5 0 0 0 3.2056E-05 1 49434 57.288 57.288 1 1.0848 1.1128 0 14371000 5217900 9152700 15400 1722 5826 5961 23993 23993 1556 HLYTLDGGDIINALCFSPNR 20 0 1 Unmodified _HLYTLDGGDIINALCFSPNR_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;D6R9Z1;H0YAM7;D6R9L0;D6REE5;H0Y8R5;D6RF23 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.7099 3 759.375793 2275.10555 69370.2 0.73644 0.00055924 -0.027545 -2.0917E-05 0.7089 0.00053832 759.709974112675 763.046191606689 120 1.0833 120 119.61 120.69 -7.6294E-06 437 75 9 0 0 0 8.5218E-10 2 77276 96.487 91.395 1 1.584 1.6205 0 32287000 15194000 17093000 15401 1227 5827 5962 23994;23995 23995 HLYTLDGGDIINALCFSPNR 20 0 1 Unmodified _HLYTLDGGDIINALCFSPNR_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;D6R9Z1;H0YAM7;D6R9L0;D6REE5;H0Y8R5;D6RF23 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.7096 3 759.375793 2275.10555 69415.9 0.79749 0.00060559 -0.15029 -0.00011413 0.64719 0.00049146 759.375274608448 763.046187918725 119.21 1.1393 119.21 118.79 119.93 7.6294E-06 459 79 9 0 0 0 2.6759E-07 2 78446 79.511 79.511 1 1.6478 1.873 0 48937000 16208000 32729000 15402 1227 5827 5962 23996;23997 23997 HLYTLDGGDIINALCFSPNR 20 0 1 Unmodified _HLYTLDGGDIINALCFSPNR_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;D6R9Z1;H0YAM7;D6R9L0;D6REE5;H0Y8R5;D6RF23 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 759.7112 3 759.375793 2275.10555 69078.88 0.66295 0.00050343 0.21671 0.00016456 0.87966 0.00066799 759.710261074282 763.046539949707 130.82 0.73053 130.82 130.55 131.28 0 228 32 10 0 0 0 5.5328E-07 2 79269 71.742 67.474 1 1.4906 1.2816 0 7754300 2647100 5107200 15403 1227 5827 5962 23998;23999 23999 HLYTLDGGDIINALCFSPNR 20 0 1 Unmodified _HLYTLDGGDIINALCFSPNR_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;D6R9Z1;H0YAM7;D6R9L0;D6REE5;H0Y8R5;D6RF23 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.0464 3 759.375793 2275.10555 69842.48 1.0299 0.00078211 -0.38749 -0.00029425 0.64244 0.00048785 759.709917057834 763.046166503674 130.74 0.84595 130.74 130.31 131.16 0 178 36 9 0 0 0 8.1374E-32 2 78191 146.67 146.67 1 1.5373 1.2442 0 10504000 4469300 6034600 15404 1227 5827 5962 24000;24001 24000 HMDITEDLTNK 11 1 0 Oxidation (M) _HM(ox)DITEDLTNK_ HM(1)DITEDLTNK HM(96.34)DITEDLTNK 0 1 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.8167 2 666.808642 1331.60273 76681.55 0.88638 0.00059105 -0.093157 -6.2118E-05 0.79322 0.00052893 666.808784700282 670.815343221251 35.523 0.31461 35.523 35.359 35.674 0 63 28 4 0 0 0 5.7305E-05 1 17857 96.342 84.748 1 0.97061 1.0125 0 12239000 5005300 7234000 15405 1224 5828 5963 24002 24002 933 HMDITEDLTNK 11 1 0 Oxidation (M) _HM(ox)DITEDLTNK_ HM(1)DITEDLTNK HM(119.6)DITEDLTNK 0 1 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.8087 2 666.808642 1331.60273 75721.38 0.97692 0.00065142 -0.23085 -0.00015393 0.74607 0.00049749 666.808316526999 670.81632816155 34.352 0.37748 34.352 34.044 34.421 0 59 24 4 0 0 0 1.769E-08 1 17369 119.6 98.514 1 0.82302 0.83852 0 12271000 5633000 6638200 15406 1224 5828 5963 24003 24003 933 HMDQPLPTAIGLYK 14 1 0 Oxidation (M) _HM(ox)DQPLPTAIGLYK_ HM(1)DQPLPTAIGLYK HM(40.15)DQPLPTAIGLYK 0 1 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPJ1;D2CPJ3;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.9151 2 800.413608 1598.81266 68735.46 1.124 0.00089963 -0.033431 -2.6759E-05 1.0905 0.00087287 801.416811799784 804.922371541138 80.862 0.79446 80.862 80.564 81.358 0 207 68 6 0 0 0 0.003671 1 48362 40.154 30.201 1 0.81884 0.833 0 13308000 6492900 6814800 15407 118;1184 5829 5964 24004 24004 100 HMLPSGFR 8 0 1 Oxidation (M) _HM(ox)LPSGFR_ HM(1)LPSGFR HM(69.18)LPSGFR 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.7397 2 480.739637 959.464721 85355.5 0.32942 0.00015837 0.35635 0.00017131 0.68577 0.00032968 480.739810016742 485.743900774749 28.209 0.26075 28.209 28.07 28.331 1.9073E-06 92 18 7 0 0 0 0.0056993 1 13225 69.176 41.859 1 1.1973 1.4027 0 212900000 92007000 120900000 15408 112 5830 5965 24005 24005 98 HMLPSGFR 8 0 1 Oxidation (M) _HM(ox)LPSGFR_ HM(1)LPSGFR HM(97.03)LPSGFR 0 1 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.7396 2 480.739637 959.464721 83265.88 0.0027805 1.3367E-06 2.8958 0.0013921 2.8986 0.0013935 480.739744471051 485.743618152976 27.413 1.1264 27.413 26.968 28.095 0 209 60 7 0 0 0 0.0016284 3 12589 97.033 66.315 1 1.219 1.416 0 356760000 164480000 192280000 15409 112 5830 5965 24006;24007;24008 24007 98 HMLPSGFR 8 0 1 Unmodified _HMLPSGFR_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 477.7468 2 472.742179 943.469806 88196.58 0.04438 2.098E-05 0.3452 0.00016319 0.38958 0.00018417 472.74217955563 477.746480674943 46.419 0.54226 46.419 46.197 46.739 0 116 32 6 0 0 0 0.027969 1 22338 53.554 53.554 1 0.93809 0.78984 0 4579700 2420600 2159100 15410 112 5830 5966 24009 24009 HMLPSGFR 8 0 1 Unmodified _HMLPSGFR_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 477.7467 2 472.742179 943.469806 NaN NaN NaN -0.19798 -9.3594E-05 NaN NaN NaN NaN 45.985 0.88179 45.985 45.703 46.585 0 0 0 0 0.02366 1 21547 63.148 57.238 1 NaN NaN 0 1956000 0 1956000 15411 112 5830 5966 24010 24010 HMLSPR 6 0 1 Oxidation (M) _HM(ox)LSPR_ HM(1)LSPR HM(85.91)LSPR 0 1 0 REV__H0YIE9 REV__H0YIE9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 378.6946 2 378.694698 755.374843 97922.34 -0.21318 -8.0732E-05 0.56393 0.00021356 0.35075 0.00013283 378.694704833885 383.698923668603 24.957 0.54589 24.957 24.708 25.254 1.9073E-06 118 27 6 0 0 0 0.031146 1 10537 85.909 28.836 1 0.61043 0.66821 0 52837000 33252000 19585000 + 15412 2160 5831 5967 24011 24011 2005 HMSADDLNDGFVLDK 15 1 0 Oxidation (M) _HM(ox)SADDLNDGFVLDK_ HM(1)SADDLNDGFVLDK HM(96.06)SADDLNDGFVLDK 0 1 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.8873 2 846.880327 1691.7461 NaN NaN NaN -0.85404 -0.00072327 NaN NaN NaN NaN 69.758 0.33873 69.758 69.699 70.037 7.6294E-06 0 0 0 2.5045E-07 1 40672 96.059 89.086 1 NaN NaN 0 9757500 0 9757500 15413 790 5832 5968 24012 24012 631 HMSADDLNDGFVLDK 15 1 0 Oxidation (M) _HM(ox)SADDLNDGFVLDK_ HM(1)SADDLNDGFVLDK HM(56.57)SADDLNDGFVLDK 0 1 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.8799 2 846.880327 1691.7461 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.897 1 69.897 69.397 70.397 0 0 0 0 0.0008931 1 40653 56.569 46.616 1 15414 790 5832 5968 24013 24013 631 HNDIVDSDSDAEDR 14 0 1 Unmodified _HNDIVDSDSDAEDR_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.3351 2 794.329512 1586.64447 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.897 1 21.897 21.397 22.397 0 0 0 0 0.0024419 1 8087 63.091 57.993 1 15415 790 5833 5969 24014 24014 HNGASEPTQPIK 12 1 0 Unmodified _HNGASEPTQPIK_ 0 0 0 REV__Q86TI1 REV__Q86TI1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.8334 2 639.825483 1277.63641 76214.52 0.46525 0.00029768 -0.043738 -2.7985E-05 0.42151 0.00026969 639.825425771188 643.832677981232 21.643 0.36221 21.643 21.382 21.744 1.9073E-06 62 17 6 0 0 0 0.039346 1 7726 34.387 34.387 1 1.122 1.1567 0 18222000 8682800 9538800 + 15416 2161 5834 5970 24015 24015 HNGASEPTQPIK 12 1 0 Unmodified _HNGASEPTQPIK_ 0 0 0 REV__Q86TI1 REV__Q86TI1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8256 2 639.825483 1277.63641 76214.52 0.31874 0.00020394 -0.13344 -8.5381E-05 0.1853 0.00011856 639.825439310652 643.832455931493 21.879 0.38826 21.879 21.696 22.084 0 93 17 9 0 0 0 0.0037023 1 7898 55.37 55.37 1 1.0436 1.1776 0 127050000 61186000 65869000 + 15417 2161 5834 5970 24016 24016 HNLEIIK 7 1 0 Unmodified _HNLEIIK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.7581 2 433.758352 865.502152 91222.26 0.13784 5.9789E-05 0.33491 0.00014527 0.47275 0.00020506 433.758422783208 437.765539656443 35.618 0.46372 35.618 35.465 35.929 0 139 43 4 0 0 0 0.00054684 2 17924 142.64 38.237 1 0.64894 0.73407 0 102920000 60612000 42311000 15418 1665 5835 5971 24017;24018 24018 HNLEIIK 7 1 0 Unmodified _HNLEIIK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.7582 2 433.758352 865.502152 91581.14 0.085681 3.7165E-05 0.056276 2.441E-05 0.14196 6.1575E-05 433.758305047847 437.765321342508 33.814 0.71001 33.814 33.376 34.086 0 208 57 7 0 0 0 0.037163 1 16921 60.972 14.951 1 0.66904 0.74749 0 90438000 51367000 39070000 15419 1665 5835 5971 24019 24019 HNTAVSQLTK 10 1 0 Unmodified _HNTAVSQLTK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.806 2 549.798737 1097.58292 80634.95 0.4818 0.00026489 -0.69707 -0.00038325 -0.21527 -0.00011836 549.798906211877 553.805738924446 21.022 0.77413 21.022 20.708 21.482 0 161 35 7 0 0 0 4.986E-52 3 7348 208.33 190.57 1 0.798 0.94661 0 499560000 266130000 233430000 15420 2070 5836 5972 24020;24021;24022 24020 HNTAVSQLTK 10 1 0 Unmodified _HNTAVSQLTK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.8065 2 549.798737 1097.58292 80007.52 0.55412 0.00030466 -0.98108 -0.0005394 -0.42696 -0.00023474 549.798884075687 553.805597978295 20.564 0.8657 20.564 20.28 21.146 0 150 33 10 0 0 0 5.8001E-112 2 6772 259.33 248.88 1 0.77494 0.91259 0 485510000 282360000 203150000 15421 2070 5836 5972 24023;24024 24023 HNTAVSQLTK 10 1 0 Unmodified _HNTAVSQLTK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.799 2 549.798737 1097.58292 80851.93 0.13538 7.4433E-05 -2.4226 -0.0013319 -2.2872 -0.0012575 550.297243220059 553.805864252121 22.342 1.2134 22.342 22.061 23.274 0 243 49 11 0 0 0 3.9953E-40 2 7052 190.57 150.3 1 0.26409 0.23034 0 164200000 81799000 82397000 15422 2070 5836 5972 24025;24026 24026 HNTAVSQLTK 10 1 0 Unmodified _HNTAVSQLTK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.7989 2 549.798737 1097.58292 80503.05 0.15186 8.3493E-05 0.064201 3.5298E-05 0.21606 0.00011879 549.799096845267 553.805826740036 21.99 0.77165 21.99 21.803 22.575 0 139 31 12 0 0 0 4.0753E-31 2 6404 187.16 187.16 1 1.7316 1.4783 0 101190000 36442000 64748000 15423 2070 5836 5972 24027;24028 24028 HNYLSQVK 8 1 0 Unmodified _HNYLSQVK_ 0 0 0 Q9H5I1;C9IYH9;C9JMB4 Q9H5I1 Q9H5I1 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.7715 2 494.764166 987.513779 87962.68 0.1988 9.8361E-05 -0.095381 -4.7191E-05 0.10342 5.117E-05 494.764123413611 498.771184290962 28.336 0.66615 28.336 28.104 28.77 0 105 35 5 0 0 0 0.0010288 1 11309 114.28 55.3 1 2.0506 1.5922 0 3570000 1266800 2303200 15424 2036 5837 5973 24029 24029 HNYLSQVK 8 1 0 Unmodified _HNYLSQVK_ 0 0 0 Q9H5I1;C9IYH9;C9JMB4 Q9H5I1 Q9H5I1 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.7644 2 494.764166 987.513779 86792.28 -0.19595 -9.6949E-05 0.54844 0.00027135 0.35249 0.0001744 494.764495897049 498.771479001241 28.195 0.43599 28.195 27.975 28.411 0 80 18 7 0 0 0 0.053866 1 10686 47.96 32.298 1 1.744 1.3666 0 3335400 1268300 2067200 15425 2036 5837 5973 24030 24030 HPAKPDPSGECNPDLR 16 1 1 Unmodified _HPAKPDPSGECNPDLR_ 0 0 1 Q6FHQ0;Q16576;E9PC52;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.6154 3 597.281053 1788.82133 77303.81 0.4524 0.00027021 -0.18114 -0.00010819 0.27126 0.00016202 597.61532678963 603.288969625488 20.889 0.54641 20.889 20.644 21.19 0 132 24 9 0 0 0 2.69E-12 2 7275 110.38 98.361 1 0.81836 0.94655 0 28758000 16211000 12547000 15426 1771 5838 5974 24031;24032 24032 HPAKPDPSGECNPDLR 16 1 1 Unmodified _HPAKPDPSGECNPDLR_ 0 0 1 Q6FHQ0;Q16576;E9PC52;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.4189 2 895.417942 1788.82133 65103.69 0.35321 0.00031627 0.011676 1.0455E-05 0.36488 0.00032672 895.41766682715 904.42904977311 20.889 0.25119 20.889 20.763 21.014 0 35 10 5 0 0 0 0.0018095 1 7282 53.569 47.536 1 1.3625 1.5272 0 6672400 3165000 3507400 15427 1771 5838 5974 24033 24033 HPAKPDPSGECNPDLR 16 1 1 Unmodified _HPAKPDPSGECNPDLR_ 0 0 1 Q6FHQ0;Q16576;E9PC52;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.2812 3 597.281053 1788.82133 77465.76 0.51732 0.00030899 -0.090372 -5.3977E-05 0.42695 0.00025501 597.280840156377 603.288557397472 20.118 0.3901 20.118 19.934 20.324 0 87 14 11 0 0 0 2.1637E-10 1 6440 124.46 116.87 1 0.91754 1.0789 0 70233000 36155000 34079000 15428 1771 5838 5974 24034 24034 HPAKPDPSGECNPDLR 16 1 1 Unmodified _HPAKPDPSGECNPDLR_ 0 0 1 Q6FHQ0;Q16576;E9PC52;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.4291 2 895.417942 1788.82133 64554.41 0.39727 0.00035573 -0.062735 -5.6174E-05 0.33454 0.00029955 895.417176458824 904.429261117066 20.106 0.24759 20.106 19.977 20.224 0 31 8 6 0 0 0 0.0008345 2 6452 73.435 64.328 1 0.78532 0.86271 0 5428600 2738900 2689700 15429 1771 5838 5974 24035;24036 24035 HPAKPDPSGECNPDLR 16 1 1 Unmodified _HPAKPDPSGECNPDLR_ 0 0 1 Q6FHQ0;Q16576;E9PC52;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.2809 3 597.281053 1788.82133 76839.79 0.22664 0.00013537 0.2027 0.00012107 0.42934 0.00025644 597.281112359231 603.288682651939 22.288 0.58847 22.288 22.032 22.62 1.9073E-06 93 22 10 0 0 0 0.00017324 2 7140 52.172 41.538 1 1.6833 1.4295 0 8822400 3416200 5406200 15430 1771 5838 5974 24037;24038 24037 HPAKPDPSGECNPDLR 16 1 1 Unmodified _HPAKPDPSGECNPDLR_ 0 0 1 Q6FHQ0;Q16576;E9PC52;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.2888 3 597.281053 1788.82133 77402.75 0.21341 0.00012747 0.3223 0.0001925 0.53571 0.00031997 597.615639942067 603.288672785643 22.019 0.46591 22.019 21.83 22.296 0 70 17 7 0 0 0 0.0012135 1 6518 40.085 40.085 1 1.6856 1.4116 0 5846100 2274000 3572100 15431 1771 5838 5974 24039 24039 HPDADSLYVEK 11 1 0 Unmodified _HPDADSLYVEK_ 0 0 0 A0A0S2Z4R1;P54577 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.3147 2 637.306592 1272.59863 76199.27 0.48815 0.0003111 0.90041 0.00057383 1.3886 0.00088494 637.808706932124 641.314150638306 34.545 0.30489 34.545 34.463 34.768 0 64 23 5 0 0 0 7.4096E-10 1 17359 126.31 92.127 1 4.3962 4.5321 0 17336000 5945400 11390000 15432 567 5839 5975 24040 24040 HPDADSLYVEK 11 1 0 Unmodified _HPDADSLYVEK_ 0 0 0 A0A0S2Z4R1;P54577 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.3052 2 637.306592 1272.59863 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.379 1 33.379 32.879 33.879 0 0 0 0 0.035763 1 16715 46.39 27.412 1 15433 567 5839 5975 24041 24041 HPDFPK 6 1 0 Unmodified _HPDFPK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 374.6969 2 370.689939 739.365324 NaN NaN NaN 0.025986 9.6328E-06 NaN NaN NaN NaN 20.816 0.44789 20.816 20.627 21.075 0 0 0 0 0.0025726 1 7214 118.06 87.96 1 NaN NaN 0 15772000 0 15772000 15434 1244 5840 5976 24042 24042 HPDGVASVSFR 11 0 1 Unmodified _HPDGVASVSFR_ 0 0 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.2991 2 586.296362 1170.57817 NaN NaN NaN 1.1361 0.00066607 NaN NaN NaN NaN 39.353 0.27484 39.353 39.202 39.477 0 0 0 0 0.043606 1 20787 46.158 26.522 1 NaN NaN 0 8745600 0 8745600 15435 1388 5841 5977 24043 24043 HPDSSVNFAEFSK 13 1 0 Unmodified _HPDSSVNFAEFSK_ 0 0 0 Q5U071;P26583;D6R9A6 Q5U071 Q5U071 HMGB2 High mobility group protein B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8416 2 732.84133 1463.66811 70909.19 0.57591 0.00042205 0.20582 0.00015083 0.78172 0.00057288 732.841600903824 736.84833100763 58.863 0.38268 58.863 58.661 59.044 0 114 31 5 0 0 0 0.00014444 1 33368 83.045 26.497 1 0.15501 0.1521 0 22849000 18946000 3903200 15436 1521 5842 5978 24044 24044 HPDSSVNFAEFSK 13 1 0 Unmodified _HPDSSVNFAEFSK_ 0 0 0 Q5U071;P26583;D6R9A6 Q5U071 Q5U071 HMGB2 High mobility group protein B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.842 2 732.84133 1463.66811 71826.9 0.59205 0.00043388 -0.44003 -0.00032248 0.15201 0.0001114 732.841416482199 737.348810032257 57.43 0.5229 57.43 57.092 57.615 -3.8147E-06 191 41 8 0 0 0 5.1559E-05 3 33261 96.604 26.933 1 0.6818 0.68569 0 27483000 19734000 7749000 15437 1521 5842 5978 24045;24046;24047 24047 HPDSSVNFAEFSK 13 1 0 Unmodified _HPDSSVNFAEFSK_ 0 0 0 Q5U071;P26583;D6R9A6 Q5U071 Q5U071 HMGB2 High mobility group protein B2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.8411 2 732.84133 1463.66811 74543.37 0.56836 0.00041652 -0.27907 -0.00020451 0.28929 0.00021201 732.841060648675 736.847900174926 68.347 0.47977 68.347 68.05 68.53 0 123 33 6 0 0 0 0.0071136 1 35618 45.433 6.6504 1 0.096843 0.076773 0 4257500 3686700 570830 15438 1521 5842 5978 24048 24048 HPDSSVNFAEFSK 13 1 0 Unmodified _HPDSSVNFAEFSK_ 0 0 0 Q5U071;P26583;D6R9A6 Q5U071 Q5U071 HMGB2 High mobility group protein B2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.8417 2 732.84133 1463.66811 NaN NaN NaN -0.87001 -0.00063758 NaN NaN NaN NaN 68.705 0.61831 68.705 68.396 69.014 0 0 0 0 1.65E-05 1 35131 93.614 38.83 1 NaN NaN 0 3553700 3553700 0 15439 1521 5842 5978 24049 24049 HPDVEVDGFSELR 13 0 1 Unmodified _HPDVEVDGFSELR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.3646 2 750.359887 1498.70522 70180.53 0.52474 0.00039375 0.11238 8.4328E-05 0.63713 0.00047807 750.359857059421 755.363881753932 74.873 1.1332 74.873 74.472 75.605 0 575 94 10 0 0 0 0.00012908 3 43849 79.201 79.201 1 0.57658 0.65755 0 119810000 78280000 41529000 15440 139 5843 5979 24050;24051;24052 24051 HPDVEVDGFSELR 13 0 1 Unmodified _HPDVEVDGFSELR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.3642 2 750.359887 1498.70522 69812.48 0.49789 0.0003736 0.047342 3.5523E-05 0.54523 0.00040912 750.359889872197 755.36384571064 73.286 1.0169 73.286 72.924 73.941 0 497 84 8 0 0 0 1.8605E-05 4 43996 99.343 99.343 1 0.57951 0.66279 0 158670000 100840000 57829000 15441 139 5843 5979 24053;24054;24055;24056 24055 HPDVEVDGFSELR 13 0 1 Unmodified _HPDVEVDGFSELR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.3602 2 750.359887 1498.70522 70029.48 0.66545 0.00049932 0.12015 9.0153E-05 0.78559 0.00058948 750.359928404412 755.364151804727 85.046 1.6092 85.046 84.505 86.114 0 642 107 10 0 0 0 0.0024941 3 46721 53.528 46.995 1 1.0655 0.91183 0 39910000 20263000 19647000 15442 139 5843 5979 24057;24058;24059 24059 HPDVEVDGFSELR 13 0 1 Unmodified _HPDVEVDGFSELR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 750.3607 2 750.359887 1498.70522 69938.86 0.60508 0.00045402 0.15031 0.00011278 0.75538 0.00056681 750.359972379998 755.364132724405 85.086 1.7221 85.086 84.57 86.292 7.6294E-06 657 107 10 0 0 0 0.0010174 1 45915 59.542 52.853 1 1.0689 0.93241 0 37372000 18491000 18881000 15443 139 5843 5979 24060 24060 HPDYAILAAR 10 0 1 Unmodified _HPDYAILAAR_ 0 0 0 B4DNN4;Q53GZ5;P23921 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.8083 2 563.803823 1125.59309 NaN NaN NaN -0.48451 -0.00027317 NaN NaN NaN NaN 51.736 0.58268 51.736 51.455 52.037 0 0 0 0 0.022498 1 28581 53.968 35.932 1 NaN NaN 0 10631000 0 10631000 15444 1014 5844 5980 24061 24061 HPELFEALGIAQPK 14 1 0 Unmodified _HPELFEALGIAQPK_ 0 0 0 Q59GS3;A0A140VJS3;P62195;J3QLH6;J3KRP2;J3QSA9;J3QQM1;J3QRW1;J3QSE0;J3QRR3 Q59GS3 Q59GS3 PSMC5 26S protease regulatory subunit 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.4283 2 775.422291 1548.83003 NaN NaN NaN -0.079581 -6.1709E-05 NaN NaN NaN NaN 100.54 0.6628 100.54 100.15 100.82 7.6294E-06 0 0 0 0.00056856 1 61485 78.342 61.71 1 NaN NaN 0 6755700 0 6755700 15445 608 5845 5981 24062 24062 HPELNISEEGITK 13 1 0 Unmodified _HPELNISEEGITK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;Q05BZ1;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.3805 2 733.877913 1465.74127 70726.91 0.74193 0.00054449 -0.18949 -0.00013906 0.55244 0.00040543 733.877758655001 737.884803352057 56.862 0.87368 56.862 56.611 57.484 0 501 72 10 0 0 0 8.6985E-06 5 31957 101.71 82.755 1 0.66084 0.75829 0 196740000 117600000 79135000 15446 1244 5846 5982 24063;24064;24065;24066;24067 24064 HPELNISEEGITK 13 1 0 Unmodified _HPELNISEEGITK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;Q05BZ1;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.8784 2 733.877913 1465.74127 70175.35 0.55358 0.00040626 -0.12021 -8.822E-05 0.43336 0.00031804 733.877679429645 737.884829531943 55.468 0.9919 55.468 55.153 56.145 0 435 75 10 0 0 0 7.2028E-61 2 31750 205.31 167.75 1 0.65533 0.76472 0 267030000 156040000 110990000 15447 1244 5846 5982 24068;24069 24069 HPELNISEEGITK 13 1 0 Unmodified _HPELNISEEGITK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;Q05BZ1;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.8788 2 733.877913 1465.74127 70575.39 0.73701 0.00054087 0.038817 2.8487E-05 0.77583 0.00056936 733.877999041379 737.885005472962 66.279 1.5404 66.279 65.891 67.431 0 460 99 9 0 0 0 7.2902E-09 3 34251 117.86 95.531 1 1.3696 1.1621 0 60615000 25109000 35506000 15448 1244 5846 5982 24070;24071;24072 24071 HPELNISEEGITK 13 1 0 Unmodified _HPELNISEEGITK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;Q05BZ1;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 733.8781 2 733.877913 1465.74127 69620.56 0.54923 0.00040307 -0.14849 -0.00010897 0.40074 0.00029409 733.877977998725 737.884880401258 66.63 1.4775 66.63 66.331 67.808 0 541 91 10 0 0 0 4.9822E-20 2 33711 150.14 131.19 1 1.3888 1.1789 0 69967000 30126000 39841000 15449 1244 5846 5982 24073;24074 24074 HPENYDLATLK 11 1 0 Unmodified _HPENYDLATLK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;X5D7Q9;A0A0A0VEB4 X5D2J9 X5D2J9 GTF2I;GTF2I-RARA General transcription factor II-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8378 2 650.830234 1299.64592 75474.72 0.66481 0.00043268 -0.92124 -0.00059957 -0.25643 -0.00016689 650.830638666955 654.836298462186 46.112 0.43881 46.112 45.892 46.331 0 136 34 7 0 0 0 5.5823E-06 1 25394 110.54 110.54 1 0.84022 0.89886 0 36951000 17885000 19066000 15450 789 5847 5983 24075 24075 HPEQIFPR 8 0 1 Unmodified _HPEQIFPR_ 0 0 0 Q86WV4;P82933 Q86WV4 Q86WV4 MRPS9 28S ribosomal protein S9, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.2726 2 512.272158 1022.52976 86503.16 0.15748 8.0675E-05 0.58238 0.00029833 0.73986 0.00037901 512.272298194508 517.276643982706 33.421 0.37767 33.421 33.239 33.617 0 104 31 6 0 0 0 0.020252 1 16765 58.604 43.165 1 1.4913 1.4741 0 15138000 6214800 8923500 15451 1670 5848 5984 24076 24076 HPFAQAVGR 9 0 1 Unmodified _HPFAQAVGR_ 0 0 0 A0A087WZN1;O43837;A0A0D9SG66;Q9UIC5;A0A087X2E5 A0A087WZN1 A0A087WZN1 IDH3B Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.7688 2 491.764501 981.514448 84734.21 0.04866 2.393E-05 0.1249 6.1421E-05 0.17356 8.535E-05 491.765026775069 496.768559347105 23.566 0.51235 23.566 23.373 23.885 0 66 24 5 0 0 0 0.014435 1 9451 55.676 45.208 1 1.1806 1.2003 0 27561000 11182000 16379000 15452 439 5849 5985 24077 24077 HPFSFPLENQAR 12 0 1 Unmodified _HPFSFPLENQAR_ 0 0 0 Q9BQG0;I3L1L3;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.8669 2 721.8624 1441.71025 71226.84 0.63107 0.00045554 -0.047321 -3.4159E-05 0.58375 0.00042138 721.862207093849 726.866643474212 83.842 0.67558 83.842 83.526 84.201 0 231 55 6 0 0 0 0.016142 1 45600 42.395 38.378 1 1.0125 0.87111 0 7004400 3448600 3555900 15453 1997 5850 5986 24078 24078 HPFSFPLENQAR 12 0 1 Unmodified _HPFSFPLENQAR_ 0 0 0 Q9BQG0;I3L1L3;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.3657 2 721.8624 1441.71025 72247.98 0.80086 0.00057811 0.16087 0.00011612 0.96173 0.00069424 721.8626291015 726.866790832883 83.592 0.65187 83.592 83.328 83.98 -7.6294E-06 152 42 5 0 0 0 0.034363 1 44710 43.308 39.421 1 1.1127 0.92323 0 5741700 3016300 2725300 15454 1997 5850 5986 24079 24079 HPGSFDVVHVK 11 1 0 Unmodified _HPGSFDVVHVK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;C9JEH7;A4FU11;Q496E4;P22090 B2R491 B2R491 RPS4X;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 407.8842 3 407.884012 1220.63021 93902.46 0.44995 0.00018353 0.30633 0.00012495 0.75628 0.00030848 407.884105630891 410.555515932378 38.738 0.49932 38.738 38.469 38.968 0 180 41 7 0 0 0 0.00010483 2 19927 68.132 68.132 1 1.1065 1.1915 0 33534000 16066000 17468000 15455 824 5851 5987 24080;24081 24081 HPHDIIDDINSGAVECPAS 19 0 0 Unmodified _HPHDIIDDINSGAVECPAS_ 0 0 0 P30050;Q59FI9 P30050 P30050 RPL12 60S ribosomal protein L12 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.3126 3 682.977699 2045.91127 NaN NaN NaN -0.19406 -0.00013254 NaN NaN NaN NaN 82.416 1.2708 82.416 81.741 83.012 0 0 0 0 9.5814E-07 1 48897 54.368 50.4 1 15456 1532 5852 5988 24082 24082 HPHDIIDDINSGAVECPAS 19 0 0 Unmodified _HPHDIIDDINSGAVECPAS_ 0 0 0 P30050;Q59FI9 P30050 P30050 RPL12 60S ribosomal protein L12 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.311 3 682.977699 2045.91127 NaN NaN NaN -0.21426 -0.00014634 NaN NaN NaN NaN 80.657 1.38 80.657 79.906 81.286 7.6294E-06 0 0 0 2.045E-24 1 48765 109.36 105.58 1 15457 1532 5852 5988 24083 24083 HPHDIIDDINSGAVECPAS 19 0 0 Unmodified _HPHDIIDDINSGAVECPAS_ 0 0 0 P30050;Q59FI9 P30050 P30050 RPL12 60S ribosomal protein L12 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1024.4641 2 1023.96291 2045.91127 NaN NaN NaN 0.029276 2.9978E-05 NaN NaN NaN NaN 80.451 0.68995 80.451 80.102 80.792 0 0 0 0 1.7576E-09 1 48948 85.274 79.668 1 15458 1532 5852 5988 24084 24084 HPHDIIDDINSGAVECPAS 19 0 0 Unmodified _HPHDIIDDINSGAVECPAS_ 0 0 0 P30050;Q59FI9 P30050 P30050 RPL12 60S ribosomal protein L12 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.9781 3 682.977699 2045.91127 NaN NaN NaN -0.20699 -0.00014137 NaN NaN NaN NaN 92.066 1.0471 92.066 91.716 92.763 -7.6294E-06 0 0 0 4.2773E-32 1 51212 101.05 97.275 1 15459 1532 5852 5988 24085 24085 HPHDIIDDINSGAVECPAS 19 0 0 Unmodified _HPHDIIDDINSGAVECPAS_ 0 0 0 P30050;Q59FI9 P30050 P30050 RPL12 60S ribosomal protein L12 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.313 3 682.977699 2045.91127 NaN NaN NaN 0.094205 6.434E-05 NaN NaN NaN NaN 91.864 0.94997 91.864 91.51 92.46 7.6294E-06 0 0 0 5.1092E-32 1 50118 100.04 96.262 1 15460 1532 5852 5988 24086 24086 HPMDLSTVK 9 1 0 Oxidation (M) _HPM(ox)DLSTVK_ HPM(1)DLSTVK HPM(57.05)DLSTVK 0 1 0 A0A024R8H6;Q15059;B4DS09;A0A140F1N4;H0YDJ7;U3KPW0;A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7;E9PIQ3 A0A024R8H6;A0A024RCR5 A0A024RCR5 BRD3;BRD2 Bromodomain-containing protein 3;Bromodomain-containing protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.263 2 522.263142 1042.51173 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.544 1 19.544 19.044 20.044 0 0 0 0 0.0080189 1 6162 57.047 8.8738 1 15461 367;249 5853 5989 24087 24087 188 HPNIVSLQDVLMQDSR 16 0 1 Oxidation (M) _HPNIVSLQDVLM(ox)QDSR_ HPNIVSLQDVLM(1)QDSR HPNIVSLQDVLM(114.63)QDSR 0 1 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.6523 3 623.315875 1866.9258 76821.99 0.9883 0.00061603 -0.10745 -6.6977E-05 0.88085 0.00054905 623.65029231733 626.651940374574 95.872 1.0943 95.872 95.301 96.396 0 334 91 6 0 0 0 1.352E-12 1 58388 114.63 114.63 1 1.5595 1.6522 0 41494000 11712000 29782000 15462 25 5854 5990 24088 24088 11 HPNIVSLQDVLMQDSR 16 0 1 Oxidation (M) _HPNIVSLQDVLM(ox)QDSR_ HPNIVSLQDVLM(1)QDSR HPNIVSLQDVLM(69.34)QDSR 0 1 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 939.4766 2 934.470174 1866.9258 62099.67 0.88165 0.00082387 0.086544 8.0873E-05 0.96819 0.00090475 934.970699499853 939.474961206554 94.395 0.28569 94.395 94.221 94.507 0 70 24 5 0 0 0 7.4616E-05 1 58610 69.345 63.861 1 1.6191 1.6002 0 15121000 4441100 10680000 15463 25 5854 5990 24089 24089 11 HPNIVSLQDVLMQDSR 16 0 1 Oxidation (M) _HPNIVSLQDVLM(ox)QDSR_ HPNIVSLQDVLM(1)QDSR HPNIVSLQDVLM(74.43)QDSR 0 1 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.6524 3 623.315875 1866.9258 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.408 1 94.408 93.908 94.908 0 0 0 0 0.00014092 1 58675 74.428 65.332 1 15464 25 5854 5990 24090 24090 11 HPPAPAEPSSDLASK 15 1 0 Unmodified _HPPAPAEPSSDLASK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5;B3KSG1;A0A087WU26 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.3833 2 752.375537 1502.73652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.468 1 27.468 26.968 27.968 1.9073E-06 0 0 0 0.00067504 1 12755 78.903 53.244 1 15465 471 5855 5991 24091 24091 HPPVESGDTPK 11 1 0 Unmodified _HPPVESGDTPK_ 0 0 0 Q9Y6K1;F8WE91;Q59HC6 Q9Y6K1 Q9Y6K1 DNMT3A DNA (cytosine-5)-methyltransferase 3A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.2885 2 582.288202 1162.56185 80087.35 0.76525 0.00044559 -0.99926 -0.00058185 -0.23401 -0.00013626 582.288102806129 586.294643802507 16.428 0.30711 16.428 16.244 16.551 0 54 15 6 0 0 0 0.013734 1 3791 47.198 37.211 1 0.83559 0.85065 0 4517200 2116300 2400900 15466 2153 5856 5992 24092 24092 HPSKPDPSGECNPDLR 16 1 1 Unmodified _HPSKPDPSGECNPDLR_ 0 0 1 Q09028 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.6206 3 602.612692 1804.81625 77673.82 0.43708 0.00026339 -0.81346 -0.0004902 -0.37638 -0.00022681 602.946796845162 608.953026129054 20.488 0.4681 20.488 20.295 20.763 0 89 20 6 0 0 0 4.096E-05 2 6892 80.411 76.02 1 0.67742 0.78227 0 28325000 16578000 11747000 15467 1695 5857 5993 24093;24094 24094 HPSKPDPSGECNPDLR 16 1 1 Unmodified _HPSKPDPSGECNPDLR_ 0 0 1 Q09028 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.4157 2 903.415399 1804.81625 NaN NaN NaN -0.022626 -2.0441E-05 NaN NaN NaN NaN 20.522 0.19635 20.522 20.411 20.608 0 0 0 0 0.0036957 1 6920 68.069 44.082 1 NaN NaN 0 1619300 1619300 0 15468 1695 5857 5993 24095 24095 HPSKPDPSGECNPDLR 16 1 1 Unmodified _HPSKPDPSGECNPDLR_ 0 0 1 Q09028 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.4261 2 903.415399 1804.81625 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.498 1 20.498 19.998 20.998 0 0 0 0 0.019965 1 6934 51.286 42.586 1 15469 1695 5857 5993 24096 24096 HPSKPDPSGECNPDLR 16 1 1 Unmodified _HPSKPDPSGECNPDLR_ 0 0 1 Q09028 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.4161 2 903.415399 1804.81625 64931 0.24051 0.00021728 0.13884 0.00012543 0.37935 0.00034271 903.415487495351 912.426953789325 19.854 0.15224 19.854 19.76 19.913 0 22 5 7 0 0 0 0.00081373 2 6232 70.488 69.237 1 0.59843 0.67271 0 13214000 8695300 4519000 15470 1695 5857 5993 24097;24098 24098 HPSKPDPSGECNPDLR 16 1 1 Unmodified _HPSKPDPSGECNPDLR_ 0 0 1 Q09028 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.6129 3 602.612692 1804.81625 77532.74 0.29892 0.00018013 -0.11917 -7.1816E-05 0.17974 0.00010832 602.612698397044 608.62013113901 19.871 0.30265 19.871 19.715 20.018 0 64 12 9 0 0 0 5.7558E-07 1 6248 96.163 92.322 1 0.74073 0.86474 0 47366000 28118000 19249000 15471 1695 5857 5993 24099 24099 HPSKPDPSGECNPDLR 16 1 1 Unmodified _HPSKPDPSGECNPDLR_ 0 0 1 Q09028 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.6194 3 602.612692 1804.81625 79386.82 0.13482 8.1243E-05 0.012952 7.8049E-06 0.14777 8.9048E-05 602.947269112466 608.620311391079 21.84 0.34803 21.84 21.684 22.032 0 76 13 9 0 0 0 7.1013E-05 2 6767 68.845 68.845 1 1.7121 1.4122 0 4183800 1530300 2653400 15472 1695 5857 5993 24100;24101 24100 HPSSPECLVSAQK 13 1 0 Unmodified _HPSSPECLVSAQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.351 2 720.351008 1438.68746 71472.16 0.39247 0.00028272 -0.27682 -0.00019941 0.11565 8.331E-05 720.350429543037 724.358106645945 30.287 0.42015 30.287 30.068 30.488 0 127 34 6 0 0 0 0.00011433 1 14748 75.509 66.151 1 0.86302 0.88727 0 9524300 5268700 4255600 15473 186;1747;718 5858 5994 24102 24102 HPSSPECLVSAQK 13 1 0 Unmodified _HPSSPECLVSAQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.3517 2 720.351008 1438.68746 73538.52 0.52873 0.00038087 -0.44003 -0.00031698 0.088699 6.3894E-05 720.35090485855 724.357710177638 35.561 0.79702 35.561 35.172 35.969 0 263 66 6 0 0 0 0.032449 1 15798 33.057 29.04 1 1.3482 1.0502 0 3335400 1230400 2105000 15474 186;1747;718 5858 5994 24103 24103 HPSSPECLVSAQK 13 1 0 Unmodified _HPSSPECLVSAQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.8535 2 720.351008 1438.68746 72438.76 0.74687 0.00053801 -0.43647 -0.00031441 0.3104 0.0002236 720.350876037813 724.357853361063 35.535 0.59828 35.535 35.248 35.846 0 225 50 6 0 0 0 0.011486 1 15336 40.496 36.609 1 1.3702 1.1106 0 2752100 1312000 1440000 15475 186;1747;718 5858 5994 24104 24104 HPVLIFITEK 10 1 0 Unmodified _HPVLIFITEK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.8627 2 598.855524 1195.69649 79694.6 0.70067 0.0004196 -0.0035101 -2.1021E-06 0.69716 0.0004175 598.855358200859 602.862667892459 85.901 1.2709 85.901 85.398 86.669 0 302 102 6 0 0 0 0.00126 3 51442 74.464 66.985 1 0.93541 1.0082 0 33973000 16543000 17430000 15476 2042 5859 5995 24105;24106;24107 24105 HPVLIFITEK 10 1 0 Unmodified _HPVLIFITEK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.8633 2 598.855524 1195.69649 80072.67 0.92111 0.00055161 0.21178 0.00012682 1.1329 0.00067844 599.357171112676 602.862511926125 83.633 0.69674 83.633 83.186 83.882 7.6294E-06 197 53 5 0 0 0 0.031151 1 51287 42.338 32.106 1 0.8215 0.8627 0 19614000 8115900 11498000 15477 2042 5859 5995 24108 24108 HPVLIFITEK 10 1 0 Unmodified _HPVLIFITEK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.8582 2 598.855524 1195.69649 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.933 1 83.933 83.433 84.433 0 0 0 0 1.5192E-12 1 51489 126.41 106.9 1 15478 2042 5859 5995 24109 24109 HPVLIFITEK 10 1 0 Unmodified _HPVLIFITEK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.8564 2 598.855524 1195.69649 78768.88 0.80824 0.00048402 0.30237 0.00018108 1.1106 0.00066509 598.855882159441 602.862456292151 96.43 1.2011 96.43 96.087 97.288 7.6294E-06 320 67 8 0 0 0 0.0083024 2 54114 56.258 46.477 1 1.1477 0.89147 0 12666000 6440400 6225600 15479 2042 5859 5995 24110;24111 24111 HPVLIFITEK 10 1 0 Unmodified _HPVLIFITEK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.862 2 598.855524 1195.69649 81093.02 0.47325 0.00028341 0.20147 0.00012065 0.67472 0.00040406 598.855736584135 602.862684416913 95.864 1.5064 95.864 95.568 97.074 0 322 87 8 0 0 0 0.022046 1 52832 46.001 46.001 1 1.2244 1.0121 0 11814000 4948700 6864900 15480 2042 5859 5995 24112 24112 HPYLPINSAAIK 12 1 0 Unmodified _HPYLPINSAAIK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q9BRL8;F8W9Y9 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.3823 2 662.374612 1322.73467 NaN NaN NaN 0.35977 0.0002383 NaN NaN NaN NaN 79.401 0.75169 79.401 79.132 79.883 0 0 0 0 0.0036838 1 41847 65.347 50.68 1 NaN NaN 0 2309900 0 2309900 15481 1223 5860 5996 24113 24113 HQACLLLQK 9 1 0 Unmodified _HQACLLLQK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.8156 2 555.808051 1109.60155 80686.86 0.34605 0.00019233 0.17622 9.7944E-05 0.52226 0.00029028 555.808154835065 559.815235449488 39.748 0.58841 39.748 39.477 40.065 0 210 46 6 0 0 0 0.0074668 2 17779 61.962 61.962 1 0.9737 0.79438 0 6058900 2930100 3128800 15482 1997 5861 5997 24114;24115 24115 HQAFEAELSANQSR 14 0 1 Unmodified _HQAFEAELSANQSR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.3833 2 794.379143 1586.74373 NaN NaN NaN 1.6586 0.0013175 NaN NaN NaN NaN 37.636 0.29537 37.636 37.47 37.765 0 0 0 0 0.0053546 1 19544 55.452 43.586 1 NaN NaN 0 9728600 0 9728600 15483 523 5862 5998 24116 24116 HQAILLGNAEEQK 13 1 0 Unmodified _HQAILLGNAEEQK_ 0 0 0 Q8IZT6;B3KWI2;Q4G1H2;Q4G1H0;A0A087WV76 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3934 2 725.886072 1449.75759 NaN NaN NaN -0.31288 -0.00022712 NaN NaN NaN NaN 36.829 0.23249 36.829 36.729 36.962 0 0 0 0 0.0013251 1 19013 76.332 37.184 1 NaN NaN 0 5520600 0 5520600 15484 1902 5863 5999 24117 24117 HQALLLDTNK 10 1 0 Unmodified _HQALLLDTNK_ 0 0 0 P49454;Q9UHT7;A0A087WTY4 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.8289 2 576.822212 1151.62987 82159.87 0.72458 0.00041795 -0.42946 -0.00024772 0.29512 0.00017023 576.821813724395 580.828868076535 36.936 0.52773 36.936 36.711 37.238 0 112 39 4 0 0 0 0.00024678 1 19118 92.538 81.317 1 0.94433 0.94313 0 14166000 6913200 7252500 15485 1581 5864 6000 24118 24118 HQCTCIDGAVGCIPLCPQELSLPNLGCPNPR 31 0 1 Unmodified _HQCTCIDGAVGCIPLCPQELSLPNLGCPNPR_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1182.5493 3 1178.54534 3532.6142 56093.6 0.33048 0.00038949 -1.0302 -0.0012142 -0.69974 -0.00082467 1179.21165666271 1182.21580782709 120.55 0.72009 120.55 120.13 120.85 0 328 51 10 0 0 0 0.00012199 1 79574 32.675 32.439 1 1.4011 1.4753 0 23214000 10173000 13041000 15486 979 5865 6001 24119 24119 HQCTCIDGAVGCIPLCPQELSLPNLGCPNPR 31 0 1 Unmodified _HQCTCIDGAVGCIPLCPQELSLPNLGCPNPR_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1182.2167 3 1178.54534 3532.6142 54313.99 0.53531 0.00063088 -1.1027 -0.0012996 -0.56742 -0.00066873 1179.21192107175 1182.5492801335 132.64 0.54324 132.64 132.43 132.98 0 233 23 14 0 0 0 1.6078E-08 3 80619 48.305 46.683 1 1.0878 0.92965 0 38746000 17028000 21718000 15487 979 5865 6001 24120;24121;24122 24121 HQDQNSVACIEEK 13 1 0 Unmodified _HQDQNSVACIEEK_ 0 0 0 A0A024R9K2;Q8TBE0 A0A024R9K2 A0A024R9K2 BAHD1 Bromo adjacent homology domain-containing 1 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.3616 2 779.351736 1556.68892 71360.03 0.46528 0.00036262 -0.17421 -0.00013577 0.29107 0.00022685 779.85304278605 783.35890163222 24.637 0.16979 24.637 24.538 24.708 0 17 6 4 0 0 0 2.8576E-09 1 10366 122.39 98.541 1 0.85904 0.86632 0 4865600 3129600 1736000 15488 281 5866 6002 24123 24123 HQEGEIFDTEK 11 1 0 Unmodified _HQEGEIFDTEK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.8081 2 666.806956 1331.59936 74236.05 0.8076 0.00053851 0.1179 7.8617E-05 0.9255 0.00061713 666.807041256011 670.814066707024 31.862 1.5283 31.862 31.411 32.939 0 837 143 9 0 0 0 6.5879E-95 4 16049 240.85 210.16 1 0.98391 1.1633 0 403070000 200300000 202780000 15489 342 5867 6003 24124;24125;24126;24127 24127 HQEGEIFDTEK 11 1 0 Unmodified _HQEGEIFDTEK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3081 2 666.806956 1331.59936 74701.62 0.59882 0.0003993 -0.031273 -2.0853E-05 0.56755 0.00037845 666.806949178338 670.813968740773 30.838 1.2818 30.838 30.468 31.75 0 640 113 9 0 0 0 8.2723E-17 4 15477 155.97 133.88 1 0.95934 1.1294 0 442600000 226080000 216520000 15490 342 5867 6003 24128;24129;24130;24131 24130 HQEGEIFDTEK 11 1 0 Unmodified _HQEGEIFDTEK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 670.8145 2 666.806956 1331.59936 74684.48 0.36682 0.0002446 0.082194 5.4807E-05 0.44901 0.0002994 666.80706761791 670.814014389378 35.785 1.8966 35.785 35.335 37.232 0 982 163 11 0 0 0 6.3496E-08 4 16175 115.29 91.858 1 0.82981 0.7109 0 75134000 40927000 34207000 15491 342 5867 6003 24132;24133;24134;24135 24134 HQEGEIFDTEK 11 1 0 Unmodified _HQEGEIFDTEK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.8074 2 666.806956 1331.59936 73854.64 0.61321 0.0004089 -0.21047 -0.00014034 0.40274 0.00026855 666.806840636245 670.813871504852 35.62 2.2083 35.62 35.149 37.358 -3.8147E-06 1041 191 9 0 0 0 2.0868E-31 4 15624 185.99 153.1 1 0.82761 0.70022 0 59323000 32674000 26649000 15492 342 5867 6003 24136;24137;24138;24139 24139 HQEHILR 7 0 1 Unmodified _HQEHILR_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 314.8424 3 311.506876 931.498798 NaN NaN NaN -0.081964 -2.5532E-05 NaN NaN NaN NaN 18.858 0.19937 18.858 18.795 18.994 0 0 0 0 0.051182 1 5723 33.813 15.082 1 NaN NaN 0 2797300 0 2797300 15493 862 5868 6004 24140 24140 HQELFR 6 0 1 Unmodified _HQELFR_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;Q9H7J4 Q7L4X7 Q7L4X7 GLTSCR2;FLJ00085 Glioma tumor suppressor candidate region gene 2 protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.2192 2 415.219395 828.424236 NaN NaN NaN 0.18631 7.7358E-05 NaN NaN NaN NaN 23.499 0.52423 23.499 23.224 23.748 0 0 0 0 0.036471 1 9336 107.49 35.499 1 NaN NaN 0 8364900 8364900 0 15494 1068 5869 6005 24141 24141 HQELLQK 7 1 0 Unmodified _HQELLQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.2518 2 448.253434 894.492316 88707.91 0.093462 4.1895E-05 -0.48424 -0.00021706 -0.39078 -0.00017517 448.252940663872 452.260276311297 19.215 0.49242 19.215 18.903 19.396 0 149 31 6 0 0 0 0.0071286 2 5805 129.55 78.656 1 1.113 1.2542 0 114810000 55601000 59208000 15495 2059 5870 6006 24142;24143 24143 HQELLQK 7 1 0 Unmodified _HQELLQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.2604 2 448.253434 894.492316 87518.92 -0.16457 -7.3769E-05 0.58079 0.00026034 0.41622 0.00018657 448.252835646655 452.260586280015 19.176 0.32331 19.176 18.901 19.225 -1.9073E-06 54 18 4 0 0 0 0.014382 1 5570 100.19 61.396 1 1.5248 1.568 0 11656000 4551000 7104800 15496 2059 5870 6006 24144 24144 HQELLQK 7 1 0 Unmodified _HQELLQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.2532 2 448.253434 894.492316 89987.66 -0.37972 -0.00017021 0.4586 0.00020557 0.07888 3.5358E-05 448.253604790891 452.260647194709 20.052 0.64383 20.052 19.798 20.442 -1.9073E-06 148 27 9 0 0 0 0.041855 1 5510 58.815 25.265 1 2.0503 1.6613 0 24543000 7794800 16748000 15497 2059 5870 6006 24145 24145 HQGVMVGMGQK 11 1 0 Oxidation (M) _HQGVMVGM(ox)GQK_ HQGVMVGM(1)GQK HQGVM(-35.09)VGM(35.09)GQK 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q562R1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;ACTBL2;PS1TP5BP1;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.2941 2 594.286625 1186.5587 77560.95 0.46292 0.00027511 0.25211 0.00014982 0.71503 0.00042493 594.286478245617 598.29384962058 17.793 0.21093 17.793 17.683 17.894 0 21 6 5 0 0 0 4.2836E-05 1 4907 97.635 86.272 2 1.9099 1.8742 0 20488000 6365500 14122000 15498 1624;1656;1100 5871 6007 24146 24146 841;842 HQGVMVGMGQK 11 1 0 Oxidation (M) _HQGVM(ox)VGMGQK_ HQGVM(1)VGMGQK HQGVM(56.36)VGM(-56.36)GQK 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q562R1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;ACTBL2;PS1TP5BP1;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.2944 2 594.286625 1186.5587 NaN NaN NaN -0.4348 -0.00025839 NaN NaN NaN NaN 20.772 0.40128 20.772 20.534 20.935 0 0 0 0 8.2702E-18 1 7178 143.03 120.8 2 NaN NaN 0 36671000 0 36671000 15499 1624;1656;1100 5871 6007 24147 24147 841;842 HQGVMVGMGQK 11 1 0 Oxidation (M) _HQGVMVGM(ox)GQK_ HQGVMVGM(1)GQK HQGVM(-42.27)VGM(42.27)GQK 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q562R1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;ACTBL2;PS1TP5BP1;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.2941 2 594.286625 1186.5587 76796.2 0.47783 0.00028397 -0.56281 -0.00033447 -0.084984 -5.0505E-05 594.286616969513 598.293730676518 17.665 0.17916 17.665 17.579 17.758 0 22 6 5 0 0 0 4.2836E-05 1 4571 97.635 74.564 2 1.4354 1.4244 0 5818800 2195300 3623500 15500 1624;1656;1100 5871 6007 24148 24148 841;842 HQGVMVGMGQK 11 1 0 Oxidation (M) _HQGVM(ox)VGMGQK_ HQGVM(1)VGMGQK HQGVM(49.24)VGM(-49.24)GQK 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q562R1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;ACTBL2;PS1TP5BP1;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.2871 2 594.286625 1186.5587 76081.86 0.20873 0.00012405 0.15921 9.4616E-05 0.36794 0.00021866 594.287048811299 598.294121529711 22.197 0.72431 22.197 22.008 22.733 0 91 28 7 0 0 0 3.5694E-08 2 7030 113.66 95.433 2 3.2746 2.6319 0 21643000 4732400 16911000 15501 1624;1656;1100 5871 6007 24149;24150 24150 841;842 HQGVMVGMGQK 11 1 0 Oxidation (M) _HQGVMVGM(ox)GQK_ HQGVM(0.001)VGM(0.999)GQK HQGVM(-28.4)VGM(28.4)GQK 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q562R1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;ACTBL2;PS1TP5BP1;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.287 2 594.286625 1186.5587 NaN NaN NaN 0.37502 0.00022287 NaN NaN NaN NaN 18.647 0.36533 18.647 18.46 18.826 0 0 0 0 0.0022635 1 4623 62.582 45.196 2 NaN NaN 0 1941800 1941800 0 15502 1624;1656;1100 5871 6007 24151 24151 841;842 HQGVMVGMGQK 11 1 0 Oxidation (M) _HQGVMVGM(ox)GQK_ HQGVMVGM(1)GQK HQGVM(-39.86)VGM(39.86)GQK 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q562R1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;ACTBL2;PS1TP5BP1;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.2943 2 594.286625 1186.5587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.634 1 18.634 18.134 19.134 0 0 0 0 1.69E-06 1 4602 96.668 60.273 2 15503 1624;1656;1100 5871 6007 24152 24152 841;842 HQGVMVGMGQK 11 1 0 Oxidation (M) _HQGVM(ox)VGMGQK_ HQGVM(1)VGMGQK HQGVM(45.11)VGM(-45.11)GQK 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q562R1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;ACTBL2;PS1TP5BP1;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.2869 2 594.286625 1186.5587 74950.34 0.20824 0.00012376 0.037049 2.2017E-05 0.24529 0.00014577 594.287021026344 598.294059830412 21.995 0.49327 21.995 21.803 22.296 0 83 18 9 0 0 0 3.5447E-08 2 6449 113.74 94.636 2 3.3178 2.655 0 21323000 4908100 16415000 15504 1624;1656;1100 5871 6007 24153;24154 24154 841;842 HQGVMVGMGQK 11 1 0 2 Oxidation (M) _HQGVM(ox)VGM(ox)GQK_ HQGVM(1)VGM(1)GQK HQGVM(42.86)VGM(42.86)GQK 0 2 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q562R1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;ACTBL2;PS1TP5BP1;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.2922 2 602.284082 1202.55361 NaN NaN NaN 0.09482 5.7108E-05 NaN NaN NaN NaN 20.506 0.18008 20.506 20.45 20.63 0 0 0 0 0.010365 1 6814 42.864 19.436 1 NaN NaN 0 5451900 0 5451900 15505 1624;1656;1100 5871 6008 24155 24155 841;842 HQGVMVGMGQK 11 1 0 2 Oxidation (M) _HQGVM(ox)VGM(ox)GQK_ HQGVM(1)VGM(1)GQK HQGVM(48.42)VGM(48.42)GQK 0 2 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q562R1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;ACTBL2;PS1TP5BP1;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.2918 2 602.284082 1202.55361 77928.58 0.12254 7.3802E-05 0.38056 0.0002292 0.50309 0.00030301 602.284609584283 606.291595510104 18.653 0.34317 18.653 18.482 18.826 1.9073E-06 63 13 8 0 0 0 0.013532 1 4576 48.423 43.776 1 3.5205 2.778 0 5392700 1245200 4147500 15506 1624;1656;1100 5871 6008 24156 24156 841;842 HQGVMVGMGQK 11 1 0 Unmodified _HQGVMVGMGQK_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q562R1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;ACTBL2;PS1TP5BP1;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.2964 2 586.289168 1170.56378 78811.84 0.16262 9.5345E-05 -0.18321 -0.00010741 -0.020585 -1.2068E-05 586.289130094298 590.296441068654 28.926 0.57322 28.926 28.786 29.36 0 116 34 8 0 0 0 7.6693E-08 1 11143 113.18 105.53 1 3.8792 3.1503 0 4447200 749300 3697900 15507 1624;1656;1100 5871 6009 24157 24157 HQLASISSPVVTSLLINLGSPVK 23 1 0 Unmodified _HQLASISSPVVTSLLINLGSPVK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B3KWS1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.463 3 787.456442 2359.3475 68236.53 0.95039 0.00074839 -0.02041 -1.6072E-05 0.92998 0.00073232 787.790798066442 790.461875045013 133.09 0.43378 133.09 132.99 133.43 0 78 13 12 0 0 0 3.2933E-38 1 87051 141.53 141.53 1 1.0077 1.1417 0 155140000 82437000 72702000 15508 897 5872 6010 24158 24158 HQLASISSPVVTSLLINLGSPVK 23 1 0 Unmodified _HQLASISSPVVTSLLINLGSPVK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B3KWS1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.7914 3 787.456442 2359.3475 67792.13 0.85856 0.00067608 -0.054038 -4.2552E-05 0.80452 0.00063353 787.790877035494 790.461908724144 133.04 0.37007 133.04 132.93 133.3 0 88 13 12 0 0 0 1.0884E-138 2 89202 226.99 219.79 1 0.91527 1.0682 0 268870000 139570000 129300000 15509 897 5872 6010 24159;24160 24159 HQLEDLR 7 0 1 Unmodified _HQLEDLR_ 0 0 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.7444 2 455.740691 909.466829 89922.24 0.11379 5.1857E-05 0.02782 1.2679E-05 0.14161 6.4536E-05 455.740884620869 460.744882088828 22.551 0.46046 22.551 22.346 22.806 0 69 19 8 0 0 0 0.032931 1 8517 64.757 13.185 1 1.1217 1.1127 0 15904000 7631400 8272700 15510 1122 5873 6011 24161 24161 HQLEEELR 8 0 1 Unmodified _HQLEEELR_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.2696 2 527.269813 1052.52507 82683.16 0.66041 0.00034822 0.27388 0.00014441 0.93429 0.00049262 527.269829839056 532.274201885781 26.234 0.55035 26.234 26.004 26.555 1.9073E-06 135 31 7 0 0 0 0.000701 2 11681 128.69 74.137 1 0.71576 0.79561 0 74121000 41152000 32969000 15511 1837 5874 6012 24162;24163 24162 HQLEEELR 8 0 1 Unmodified _HQLEEELR_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.2739 2 527.269813 1052.52507 83281.78 0.62606 0.0003301 -0.22052 -0.00011627 0.40555 0.00021383 527.269530580281 532.273781294121 25.423 0.45346 25.423 25.153 25.607 0 69 17 8 0 0 0 8.0927E-09 1 10982 155.07 87.087 1 0.71201 0.81083 0 130880000 72941000 57937000 15512 1837 5874 6012 24164 24164 HQLEEELR 8 0 1 Unmodified _HQLEEELR_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.2695 2 527.269813 1052.52507 82318.97 0.24315 0.00012821 -0.10078 -5.3136E-05 0.14238 7.5071E-05 527.26986490934 532.273844482445 28.804 1.0357 28.804 28.524 29.559 -1.9073E-06 350 75 7 0 0 0 0.0095415 2 11574 74.301 42.997 1 1.264 1.0424 0 11603000 5269900 6332600 15513 1837 5874 6012 24165;24166 24165 HQLEEELR 8 0 1 Unmodified _HQLEEELR_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.27 2 527.269813 1052.52507 83877.82 0.05124 2.7017E-05 -0.05893 -3.1072E-05 -0.0076901 -4.0548E-06 527.269836689071 532.273909876604 28.889 1.0105 28.889 28.62 29.63 -1.9073E-06 235 61 9 0 0 0 0.0030448 2 11155 98.033 49.472 1 1.3371 1.1346 0 18840000 7145000 11695000 15514 1837 5874 6012 24167;24168 24168 HQLNELGSESAK 12 1 0 Unmodified _HQLNELGSESAK_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.8361 2 656.828223 1311.64189 NaN NaN NaN 0.60554 0.00039774 NaN NaN NaN NaN 22.999 0.28037 22.999 22.845 23.126 0 0 0 0 0.0012048 1 8964 80.706 71.348 1 NaN NaN 0 4744700 0 4744700 15515 1843 5875 6013 24169 24169 HQLNELGSESAK 12 1 0 Unmodified _HQLNELGSESAK_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.8265 2 656.828223 1311.64189 73975.84 1.0763 0.00070696 -1.4124 -0.00092768 -0.33604 -0.00022072 656.826733350669 660.834428202887 22.39 0.30316 22.39 22.285 22.588 0 51 12 7 0 0 0 1.2654E-18 2 8442 149.23 121.02 1 0.76234 0.77314 0 12885000 8148200 4737100 15516 1843 5875 6013 24170;24171 24170 HQLNELGSESAK 12 1 0 Unmodified _HQLNELGSESAK_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.8351 2 656.828223 1311.64189 74353.67 0.61484 0.00040384 -0.19772 -0.00012987 0.41712 0.00027398 656.827653585564 660.835333003007 25.102 0.40204 25.102 24.902 25.304 0 91 19 7 0 0 0 0.012993 2 9012 44.612 44.612 1 0.755 0.61702 0 2625300 1300700 1324500 15517 1843 5875 6013 24172;24173 24172 HQNTEVVLYLAR 12 0 1 Unmodified _HQNTEVVLYLAR_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.8914 2 721.891158 1441.76776 71974.12 0.61215 0.00044191 0.11442 8.2598E-05 0.72657 0.00052451 721.89097509926 726.89533620218 83.228 0.6982 83.228 82.757 83.456 0 121 40 4 0 0 0 0.041898 1 45340 45.598 35.366 1 1.5459 1.2926 0 3711700 1481900 2229900 15518 765 5876 6014 24174 24174 HQNVQLPR 8 0 1 Unmodified _HQNVQLPR_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;K7EK45;A0A0D9SF20;A0A087WUW5 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.2798 2 496.275232 990.535912 84760.11 -0.41893 -0.0002079 0.90627 0.00044976 0.48734 0.00024186 496.275800279335 501.27962543637 24.493 0.45165 24.493 24.216 24.668 1.9073E-06 50 17 6 0 0 0 1.8174E-05 1 10195 142.64 112.45 1 2.2055 2.3425 0 42431000 12227000 30205000 15519 592 5877 6015 24175 24175 HQNVQLPR 8 0 1 Unmodified _HQNVQLPR_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;K7EK45;A0A0D9SF20;A0A087WUW5 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2765 2 496.275232 990.535912 NaN NaN NaN -2.6626 -0.0013214 NaN NaN NaN NaN 23.858 0.39488 23.858 23.701 24.095 0 0 0 0 0.0079734 1 9653 81.119 55.382 1 NaN NaN 0 47483000 0 47483000 15520 592 5877 6015 24176 24176 HQPASASSTAASPAHPAK 18 1 0 Unmodified _HQPASASSTAASPAHPAK_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.292 3 572.620175 1714.8387 80722.37 0.084164 4.8194E-05 0.38243 0.00021899 0.46659 0.00026718 572.620711447636 575.625839806326 15.384 0.10505 15.384 15.343 15.448 0 41 8 6 0 0 0 0.0040481 1 2479 18.922 17.65 1 1.0618 0.91959 0 633300 279600 353690 15521 1977 5878 6016 24177 24177 HQSFVLVGETGSGK 14 1 0 Unmodified _HQSFVLVGETGSGK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.3805 2 723.372798 1444.73104 71314.95 0.54965 0.0003976 0.79475 0.0005749 1.3444 0.0009725 723.372725000312 727.380426037435 50.614 0.34886 50.614 50.331 50.68 0 151 33 6 0 0 0 0.00017099 2 27903 73.466 73.466 1 1.1257 1.2201 0 44386000 22866000 21520000 15522 1379 5879 6017 24178;24179 24179 HQSFVLVGETGSGK 14 1 0 Unmodified _HQSFVLVGETGSGK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.4078 2 723.372798 1444.73104 NaN NaN NaN 0.51176 0.00037019 NaN NaN NaN NaN 51.167 0.14196 51.167 51.1 51.242 0 0 0 0 0.00076172 1 28291 76.728 36.377 1 NaN NaN 0 13794000 0 13794000 15523 1379 5879 6017 24180 24180 HQSFVLVGETGSGK 14 1 0 Unmodified _HQSFVLVGETGSGK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.3817 2 723.372798 1444.73104 70134.77 0.86462 0.00062544 0.51948 0.00037577 1.3841 0.0010012 723.372779908507 727.380362495374 48.533 0.76728 48.533 48.288 49.055 0 227 57 7 0 0 0 0.0010974 2 27028 57.175 57.175 1 1.1461 1.2868 0 75763000 37810000 37953000 15524 1379 5879 6017 24181;24182 24181 HQSFVLVGETGSGK 14 1 0 Unmodified _HQSFVLVGETGSGK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.2567 3 482.584291 1444.73104 88220.21 0.48185 0.00023253 -0.18847 -9.0953E-05 0.29337 0.00014158 482.584018863163 485.255407690237 48.545 0.43319 48.545 48.342 48.775 -3.8147E-06 98 30 4 0 0 0 0.0004282 1 27134 40.857 35.562 1 1.2239 1.2432 0 16732000 9077600 7654200 15525 1379 5879 6017 24183 24183 HQSFVLVGETGSGK 14 1 0 Unmodified _HQSFVLVGETGSGK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.3807 2 723.372798 1444.73104 71924.88 0.76144 0.0005508 0.35734 0.00025849 1.1188 0.0008093 723.372745379255 727.380217784884 57.485 0.51688 57.485 57.268 57.785 3.8147E-06 217 37 9 0 0 0 0.0018902 2 29059 50.46 50.46 1 1.1741 0.91588 0 12115000 5547300 6567600 15526 1379 5879 6017 24184;24185 24185 HQSFVLVGETGSGK 14 1 0 Unmodified _HQSFVLVGETGSGK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.3815 2 723.372798 1444.73104 71322.99 0.69185 0.00050047 0.04952 3.5821E-05 0.74137 0.00053629 723.37268602418 727.379957832645 57.621 0.60074 57.621 57.401 58.002 3.8147E-06 261 43 9 0 0 0 0.00023532 2 28520 64.313 64.313 1 1.1792 0.94661 0 14130000 6601400 7529000 15527 1379 5879 6017 24186;24187 24187 HQSFVLVGETGSGK 14 1 0 Unmodified _HQSFVLVGETGSGK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.2559 3 482.584291 1444.73104 87004.57 0.34137 0.00016474 -0.67531 -0.00032589 -0.33394 -0.00016115 482.583839639864 485.589851257178 57.645 0.34303 57.645 57.485 57.828 0 98 24 5 0 0 0 0.0052831 2 28551 26.365 24.065 1 1.4282 1.155 0 2572300 1132000 1440200 15528 1379 5879 6017 24188;24189 24188 HQVEQLSSSLK 11 1 0 Unmodified _HQVEQLSSSLK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.3354 2 628.335684 1254.65681 76877.74 0.45583 0.00028641 -1.6057 -0.0010089 -1.1499 -0.00072252 628.335896693547 632.841908061154 29.127 0.49154 29.127 29.003 29.495 -1.9073E-06 109 33 7 0 0 0 0.00046689 1 14136 76.228 33.629 1 1.7987 1.9443 0 42701000 12241000 30460000 15529 186;1747;718 5880 6018 24190 24190 HQVEQLSSSLK 11 1 0 Unmodified _HQVEQLSSSLK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.3434 2 628.335684 1254.65681 NaN NaN NaN -1.4326 -0.00090015 NaN NaN NaN NaN 28.237 0.3101 28.237 28.13 28.44 0 0 0 0 8.1104E-23 2 13460 154.15 115.86 1 NaN NaN 0 19962000 0 19962000 15530 186;1747;718 5880 6018 24191;24192 24192 HQVEQLSSSLK 11 1 0 Unmodified _HQVEQLSSSLK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.3368 2 628.335684 1254.65681 NaN NaN NaN 1.121 0.00070434 NaN NaN NaN NaN 33.146 0.53623 33.146 32.936 33.472 0 0 0 0 0.0083864 1 14446 72.34 44.131 1 NaN NaN 0 2120100 2120100 0 15531 186;1747;718 5880 6018 24193 24193 HQVEYLGLK 9 1 0 Unmodified _HQVEYLGLK_ 0 0 0 Q4KMR3;Q12965;Q6ZNI9;O00160;B0I1T1;Q4LE34 Q4KMR3 Q4KMR3 MYO1E;FLJ00395;MYO1F;MYO1F variant protein Unconventional myosin-Ie;Unconventional myosin-If MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.8019 2 543.800749 1085.58694 82211.41 2.2299 0.0012126 -0.15696 -8.5357E-05 2.0729 0.0011272 543.800686987647 547.807305711362 43.799 0.39392 43.799 43.635 44.029 0 105 30 5 0 0 0 0.0005245 1 23917 98.044 42.513 1 0.81431 0.83392 0 25585000 13048000 12537000 15532 1703 5881 6019 24194 24194 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.9024 2 707.8937 1413.77285 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.651 1 24.651 24.151 25.151 0 0 0 0 1.2393E-06 1 10369 98.898 61.707 1 15533 878 5882 6020 24195 24195 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.7431 3 472.264892 1413.77285 89469.46 -0.035307 -1.6674E-05 0.32787 0.00015484 0.29256 0.00013817 472.265382354726 474.936309120063 24.657 0.51107 24.657 24.42 24.931 -1.9073E-06 98 22 8 0 0 0 0.031505 1 10453 28.46 19.506 1 0.67552 0.7264 0 40114000 23472000 16642000 15534 878 5882 6020 24196 24196 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.9365 3 472.264892 1413.77285 87619.57 -0.063272 -2.9881E-05 -0.29414 -0.00013891 -0.35741 -0.00016879 472.264675169806 474.93630683876 23.266 0.60349 23.266 23.017 23.62 1.9073E-06 101 26 9 0 0 0 6.9764E-05 2 9130 84.169 75.455 1 0.66148 0.74537 0 59864000 35612000 24252000 15535 878 5882 6020 24197;24198 24198 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.8941 2 707.8937 1413.77285 72927.75 0.35054 0.00024815 -0.15346 -0.00010863 0.19709 0.00013952 707.893675979522 711.900648219004 23.264 0.22938 23.264 23.109 23.339 0 29 9 6 0 0 0 3.5783E-09 2 9174 147.62 147.62 1 0.71541 0.71641 0 15671000 8470900 7200600 15536 878 5882 6020 24199;24200 24199 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 474.9365 3 472.264892 1413.77285 88394.25 0.067279 3.1773E-05 -0.07723 -3.6473E-05 -0.0099508 -4.6994E-06 472.264456315387 474.936416668585 26.277 0.62304 26.277 25.995 26.618 0 132 26 9 0 0 0 5.6597E-05 1 9862 75.483 75.483 1 1.9011 1.4995 0 5457400 2003400 3454000 15537 878 5882 6020 24201 24201 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 474.9363 3 472.264892 1413.77285 87446.33 0.29614 0.00013986 -0.28878 -0.00013638 0.0073639 3.4777E-06 472.264745153204 474.936168160002 25.784 0.54319 25.784 25.581 26.125 1.9073E-06 89 21 8 0 0 0 0.012492 2 9013 34.183 34.183 1 1.7627 1.4422 0 4828100 1997200 2830900 15538 878 5882 6020 24202;24203 24203 HQVSVEGTNQTDVK 14 1 0 Unmodified _HQVSVEGTNQTDVK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.3812 2 771.381351 1540.74815 69248.61 0.65433 0.00050474 0.26494 0.00020437 0.91927 0.0007091 771.381357839711 775.388663509427 21.069 0.21121 21.069 20.979 21.19 0 45 10 7 0 0 0 1.9152E-21 2 7410 147.24 147.24 1 0.59752 0.59 0 8442600 5236700 3205900 15539 1738 5883 6021 24204;24205 24204 HQVSVEGTNQTDVK 14 1 0 Unmodified _HQVSVEGTNQTDVK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.3747 2 771.381351 1540.74815 66456.2 0.72645 0.00056037 -0.091507 -7.0587E-05 0.63494 0.00048978 771.881794041303 775.388062122506 20.766 0.30996 20.766 20.599 20.909 0 32 9 7 0 0 0 1.3363E-69 3 7021 201.48 181.49 1 0.65612 0.66469 0 12971000 7204700 5766600 15540 1738 5883 6021 24206;24207;24208 24206 HRDFVAEPMGEK 12 1 1 Oxidation (M) _HRDFVAEPM(ox)GEK_ HRDFVAEPM(1)GEK HRDFVAEPM(48.11)GEK 0 1 1 A0A024R5H0;O75531;E9PJJ8 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.8946 3 477.894359 1430.66125 84631.63 0.056754 2.7122E-05 -0.017712 -8.4646E-06 0.039042 1.8658E-05 477.89432373247 483.901775191752 23.414 0.37392 23.414 23.292 23.666 0 102 17 8 0 0 0 0.0020122 1 9316 48.112 43.768 1 1.0211 1.2192 0 52161000 26778000 25383000 15541 181 5884 6022 24209 24209 147 HRDFVAEPMGEK 12 1 1 Oxidation (M) _HRDFVAEPM(ox)GEK_ HRDFVAEPM(1)GEK HRDFVAEPM(59.59)GEK 0 1 1 A0A024R5H0;O75531;E9PJJ8 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.8941 3 477.894359 1430.66125 86318.08 0.27176 0.00012987 0.17052 8.1488E-05 0.44227 0.00021136 477.894554231054 483.901781327989 20.731 0.55883 20.731 20.569 21.127 0 96 22 9 0 0 0 0.00051303 2 6976 59.592 52.016 1 1.0703 1.2557 0 58181000 28728000 29454000 15542 181 5884 6022 24210;24211 24210 147 HRDFVAEPMGEK 12 1 1 Oxidation (M) _HRDFVAEPM(ox)GEK_ HRDFVAEPM(1)GEK HRDFVAEPM(54.47)GEK 0 1 1 A0A024R5H0;O75531;E9PJJ8 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.84 2 716.337901 1430.66125 70702.05 0.7804 0.00055903 -0.012026 -8.6149E-06 0.76837 0.00055041 716.338037378676 725.349417144278 20.735 0.22971 20.735 20.599 20.829 0 24 6 7 0 0 0 0.0034393 1 7019 54.471 54.471 1 0.92389 1.0518 0 19248000 10140000 9108400 15543 181 5884 6022 24212 24212 147 HSATPFLK 8 1 0 Unmodified _HSATPFLK_ 0 0 0 B4DY32;P08243;F8WEJ5;C9J057 B4DY32 B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.7579 2 450.750527 899.486502 NaN NaN NaN 0.9944 0.00044823 NaN NaN NaN NaN 29.901 0.38167 29.901 29.666 30.047 0 0 0 0 0.0077322 1 14542 81.784 29.101 1 NaN NaN 0 7888700 0 7888700 15544 1051 5885 6023 24213 24213 HSDASLTDTVNK 12 1 0 Unmodified _HSDASLTDTVNK_ 0 0 0 A0A024R363;A0A087X0F1;Q9UK61 A0A024R363;Q9UK61 A0A024R363 C3orf63;FAM208A Protein FAM208A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.3127 2 644.312406 1286.61026 75819.1 0.75732 0.00048795 -0.46596 -0.00030022 0.29136 0.00018773 644.31212937833 648.319097283164 23.152 0.43426 23.152 22.979 23.414 0 70 21 6 0 0 0 3.1826E-18 2 9075 147.19 124.13 1 0.79666 0.83479 0 15192000 9065000 6127000 15545 129;2105 5886 6024 24214;24215 24215 HSDASLTDTVNK 12 1 0 Unmodified _HSDASLTDTVNK_ 0 0 0 A0A024R363;A0A087X0F1;Q9UK61 A0A024R363;Q9UK61 A0A024R363 C3orf63;FAM208A Protein FAM208A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.3206 2 644.312406 1286.61026 73525.7 0.60421 0.0003893 -0.18207 -0.00011731 0.42214 0.00027199 644.311485614983 648.319745596918 22.571 0.80023 22.571 22.309 23.109 0 78 34 6 0 0 0 9.4323E-104 2 8537 243.53 205.45 1 1.0826 1.0806 0 14605000 7300500 7304400 15546 129;2105 5886 6024 24216;24217 24216 HSELLQK 7 1 0 Unmodified _HSELLQK_ 0 0 0 A0A0S2Z5D2;Q53G62;A0A0S2Z563;A0A0S2Z5H0;Q9Y2Q9;H7C5V3;E5RFT8 A0A0S2Z5D2 A0A0S2Z5D2 MRPS28 28S ribosomal protein S28, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.7401 2 427.74016 853.465767 94529.52 0.10932 4.6761E-05 0.80538 0.0003445 0.91471 0.00039126 427.740462053939 431.747750080803 19.289 0.28594 19.289 19.153 19.439 0 31 14 5 0 0 0 0.026969 1 5980 84.064 23.719 1 0.6977 0.68553 0 23345000 15155000 8190700 15547 576 5887 6025 24218 24218 HSGNITFDEIVNIAR 15 0 1 Unmodified _HSGNITFDEIVNIAR_ 0 0 0 P30050 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.4351 2 843.433918 1684.85328 66562.97 0.76372 0.00064415 0.10992 9.2709E-05 0.87364 0.00073686 843.43373242258 848.438227851796 105.44 1.7314 105.44 104.6 106.34 0 709 133 8 0 0 0 3.8185E-15 4 65235 155.08 155.08 1 0.88806 0.99608 0 91769000 45592000 46177000 15548 1532 5888 6026 24219;24220;24221;24222 24221 HSGNITFDEIVNIAR 15 0 1 Unmodified _HSGNITFDEIVNIAR_ 0 0 0 P30050 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.6252 3 562.625037 1684.85328 80191.44 0.69619 0.00039169 -0.28089 -0.00015804 0.41529 0.00023365 562.624982310579 565.96094878652 105.48 1.624 105.48 104.47 106.09 0 686 128 9 0 0 0 1.7553E-22 3 65408 143.38 143.38 1 0.91689 1.0548 0 145280000 73743000 71540000 15549 1532 5888 6026 24223;24224;24225 24224 HSGNITFDEIVNIAR 15 0 1 Unmodified _HSGNITFDEIVNIAR_ 0 0 0 P30050 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.6255 3 562.625037 1684.85328 80081.09 0.41947 0.000236 0.073211 4.119E-05 0.49268 0.00027719 562.625138489176 565.961146906337 103.4 1.5132 103.4 102.88 104.39 0 813 125 9 0 0 0 6.6533E-07 3 65213 98.895 98.895 1 0.91892 1.049 0 145580000 77109000 68468000 15550 1532 5888 6026 24226;24227;24228 24227 HSGNITFDEIVNIAR 15 0 1 Unmodified _HSGNITFDEIVNIAR_ 0 0 0 P30050 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.4382 2 843.433918 1684.85328 65725.25 0.49144 0.0004145 0.0099076 8.3564E-06 0.50135 0.00042285 843.434008592603 848.43839716471 103.42 1.5953 103.42 102.95 104.55 -7.6294E-06 603 132 7 0 0 0 2.0367E-38 2 65549 190.1 190.1 1 0.90403 1.031 0 139490000 71583000 67904000 15551 1532 5888 6026 24229;24230 24230 HSGNITFDEIVNIAR 15 0 1 Unmodified _HSGNITFDEIVNIAR_ 0 0 0 P30050 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.296 3 562.625037 1684.85328 80063.2 0.89643 0.00050435 -0.43309 -0.00024367 0.46334 0.00026068 562.624886883531 565.960859449494 115.16 0.99238 115.16 114.88 115.88 0 303 46 10 0 0 0 5.7722E-05 2 67303 60.489 60.489 1 1.0514 0.90423 0 47609000 22836000 24773000 15552 1532 5888 6026 24231;24232 24232 HSGNITFDEIVNIAR 15 0 1 Unmodified _HSGNITFDEIVNIAR_ 0 0 0 P30050 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 843.4326 2 843.433918 1684.85328 66282.82 0.92105 0.00077684 -0.61041 -0.00051484 0.31064 0.000262 843.433417041643 848.437711418823 115.2 0.62895 115.2 114.88 115.51 0 163 29 8 0 0 0 0.00052683 1 67342 68.83 68.83 1 1.0404 0.8888 0 38375000 18054000 20321000 15553 1532 5888 6026 24233 24233 HSGNITFDEIVNIAR 15 0 1 Unmodified _HSGNITFDEIVNIAR_ 0 0 0 P30050 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.9621 3 562.625037 1684.85328 79902.38 0.68432 0.00038502 -0.21116 -0.0001188 0.47316 0.00026621 562.624945096856 565.961030031126 114.92 0.85464 114.92 114.69 115.55 7.6294E-06 277 40 10 0 0 0 2.0873E-06 2 66205 75.911 75.911 1 1.0637 0.92787 0 41145000 20378000 20766000 15554 1532 5888 6026 24234;24235 24234 HSGNITFDEIVNIAR 15 0 1 Unmodified _HSGNITFDEIVNIAR_ 0 0 0 P30050 P30050 P30050 RPL12 60S ribosomal protein L12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 843.4342 2 843.433918 1684.85328 66472.79 0.69978 0.00059022 -0.38761 -0.00032692 0.31217 0.00026329 843.433532433633 848.43790864367 114.92 0.70064 114.92 114.67 115.37 0 160 33 7 0 0 0 0.029146 1 66233 37.613 37.613 1 1.0612 0.92579 0 46179000 22219000 23960000 15555 1532 5888 6026 24236 24236 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.8668 2 815.863857 1629.71316 67177.16 0.41086 0.00033521 0.24719 0.00020168 0.65806 0.00053688 815.863966175156 820.868336838863 25.151 0.36152 25.151 25.011 25.372 0 87 16 8 0 0 0 4.2605E-81 2 10761 206.66 197.23 1 1.681 1.8606 0 61331000 23375000 37956000 15556 234 5889 6027 24237;24238 24237 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.2452 3 544.244997 1629.71316 82130.66 0.42585 0.00023177 -0.11546 -6.2841E-05 0.31038 0.00016892 544.245008926798 547.581012246797 25.158 0.47694 25.158 24.916 25.393 1.9073E-06 111 23 9 0 0 0 2.3302E-45 3 10803 155.37 148 1 1.6945 1.8726 0 57029000 21320000 35709000 15557 234 5889 6027 24239;24240;24241 24240 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.8705 2 815.863857 1629.71316 67306.17 0.86586 0.00070643 0.15449 0.00012604 1.0204 0.00083247 815.86410059839 820.868071503067 24.803 0.35673 24.803 24.655 25.012 -1.9073E-06 98 15 11 0 0 0 2.9181E-68 2 10430 206.66 197.23 1 1.6252 1.8536 0 140320000 53812000 86509000 15558 234 5889 6027 24242;24243 24242 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.5817 3 544.244997 1629.71316 81646.41 0.6837 0.0003721 0.078238 4.2581E-05 0.76194 0.00041468 544.245129276933 547.581070985943 24.807 0.52361 24.807 24.514 25.038 0 105 23 8 0 0 0 1.7776E-34 2 10468 158.65 151.93 1 1.5044 1.7164 0 93834000 37953000 55882000 15559 234 5889 6027 24244;24245 24244 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.869 2 815.863857 1629.71316 NaN NaN NaN 0.44669 0.00036443 NaN NaN NaN NaN 23.635 0.18657 23.635 23.514 23.701 1.9073E-06 0 0 0 6.1444E-05 1 9486 77.894 70.766 1 NaN NaN 0 5073500 0 5073500 15560 234 5889 6027 24246 24246 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 821.3698 2 815.863857 1629.71316 67482.27 0.65023 0.0005305 -0.16149 -0.00013175 0.48875 0.00039875 815.863686115747 820.867896999274 27.997 0.45318 27.997 27.835 28.288 0 128 22 9 0 0 0 0.0019685 2 11031 56.122 52.359 1 1.178 1.0137 0 7112000 3127500 3984500 15561 234 5889 6027 24247;24248 24247 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.2449 3 544.244997 1629.71316 82010.56 0.58598 0.00031892 -0.39443 -0.00021467 0.19155 0.00010425 544.244559104222 547.580992703621 27.993 0.58153 27.993 27.756 28.338 0 132 27 8 0 0 0 5.8794E-05 2 11093 42.382 41.687 1 1.095 0.9292 0 9241000 4114900 5126100 15562 234 5889 6027 24249;24250 24249 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 816.3657 2 815.863857 1629.71316 67018.01 0.338 0.00027576 -0.08232 -6.7162E-05 0.25568 0.0002086 815.86380518175 820.868011865953 28.099 0.5125 28.099 27.898 28.411 0 121 23 8 0 0 0 0.011445 1 10556 32.933 32.933 1 1.1344 0.94215 0 5888300 2533700 3354500 15563 234 5889 6027 24251 24251 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.5812 3 544.244997 1629.71316 80172.91 0.19895 0.00010827 -0.38447 -0.00020925 -0.18553 -0.00010097 544.24476804179 547.581114328563 28.111 0.49321 28.111 27.898 28.391 0 123 22 8 0 0 0 0.0011725 1 10682 36.698 35.889 1 1.1256 0.93384 0 5209000 2122400 3086600 15564 234 5889 6027 24252 24252 HSIAQLDPEALGNIK 15 1 0 Unmodified _HSIAQLDPEALGNIK_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.9653 3 535.958017 1604.85222 82575.73 0.61399 0.00032907 0.046469 2.4906E-05 0.66046 0.00035398 535.958114872233 538.629338281863 85.742 1.0674 85.742 85.267 86.335 0 603 88 10 0 0 0 5.1426E-11 2 51361 98.439 98.439 1 1.005 1.1341 0 134560000 64590000 69968000 15565 1789 5890 6028 24253;24254 24253 HSIAQLDPEALGNIK 15 1 0 Unmodified _HSIAQLDPEALGNIK_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.4391 2 803.433387 1604.85222 68892.07 0.70891 0.00056956 -0.68929 -0.0005538 0.019622 1.5765E-05 803.432559158789 807.440330888761 84.167 0.87633 84.167 83.765 84.641 7.6294E-06 386 72 8 0 0 0 5.4568E-07 1 51443 101.53 94.27 1 0.93952 1.0602 0 127320000 63825000 63494000 15566 1789 5890 6028 24255 24255 HSIAQLDPEALGNIK 15 1 0 Unmodified _HSIAQLDPEALGNIK_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.9591 3 535.958017 1604.85222 82868.95 0.68567 0.00036749 -0.0051031 -2.735E-06 0.68057 0.00036476 535.958032615571 538.629344878165 84.166 1.2037 84.166 83.73 84.933 0 630 100 9 0 0 0 3.2369E-06 2 51499 66.246 65.113 1 1.049 1.2224 0 252160000 121020000 131150000 15567 1789 5890 6028 24256;24257 24256 HSIAQLDPEALGNIK 15 1 0 Unmodified _HSIAQLDPEALGNIK_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.9643 3 535.958017 1604.85222 82393.73 0.62527 0.00033512 -0.070515 -3.7793E-05 0.55476 0.00029733 535.957979974078 538.629330271717 97.588 1.3453 97.588 97.159 98.504 0 505 81 9 0 0 0 5.0217E-06 4 54787 63.754 59.285 1 1.4557 1.1911 0 34952000 15229000 19723000 15568 1789 5890 6028 24258;24259;24260;24261 24258 HSIAQLDPEALGNIK 15 1 0 Unmodified _HSIAQLDPEALGNIK_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.4414 2 803.433387 1604.85222 68806.58 0.67568 0.00054286 -0.71693 -0.00057601 -0.041251 -3.3143E-05 803.432508544294 807.440266751061 97.568 0.93301 97.568 97.203 98.136 0 400 58 10 0 0 0 2.4686E-07 1 54816 107.65 107.65 1 1.527 1.2411 0 28870000 12319000 16552000 15569 1789 5890 6028 24262 24262 HSIAQLDPEALGNIK 15 1 0 Unmodified _HSIAQLDPEALGNIK_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.4341 2 803.433387 1604.85222 68399.91 0.37853 0.00030412 -0.35881 -0.00028828 0.019718 1.5842E-05 803.432987020928 807.44039759469 97.316 1.1261 97.316 96.885 98.011 0 393 60 10 0 0 0 0.00022504 2 53776 71.548 71.548 1 1.3418 1.1139 0 36516000 15320000 21197000 15570 1789 5890 6028 24263;24264 24264 HSIAQLDPEALGNIK 15 1 0 Unmodified _HSIAQLDPEALGNIK_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.6291 3 535.958017 1604.85222 82524.7 0.37326 0.00020005 -0.049416 -2.6485E-05 0.32384 0.00017356 535.958004430227 538.62929923947 97.312 1.2071 97.312 96.907 98.114 0 411 65 10 0 0 0 3.1304E-06 2 53788 70.26 70.26 1 1.5082 1.2532 0 37388000 15371000 22017000 15571 1789 5890 6028 24265;24266 24265 HSIAQLDPEALGNIKK 16 2 0 Unmodified _HSIAQLDPEALGNIKK_ 0 0 1 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 578.6563 3 578.656338 1732.94718 80350.65 0.41059 0.00023759 0.40423 0.00023391 0.81482 0.0004715 578.656450682028 583.999136155028 79.702 0.63383 79.702 79.458 80.092 0 169 39 6 0 0 0 0.031978 2 43001 17.757 17.757 1 1.926 1.6622 0 5018600 2061100 2957500 15572 1789 5891 6029 24267;24268 24268 HSIAQLDPEALGNIKK 16 2 0 Unmodified _HSIAQLDPEALGNIKK_ 0 0 1 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.0001 3 578.656338 1732.94718 79235.63 0.34092 0.00019728 0.63199 0.0003657 0.97291 0.00056298 578.991046051062 584.333760694604 79.616 0.73875 79.616 79.321 80.06 0 138 45 6 0 0 0 0.019935 1 41989 20.939 20.939 1 1.7167 1.4655 0 4858700 1479600 3379000 15573 1789 5891 6029 24269 24269 HSLAFVVR 8 0 1 Unmodified _HSLAFVVR_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.7719 2 464.771794 927.529036 88199.25 0.32386 0.00015052 0.0022652 1.0528E-06 0.32613 0.00015157 464.77168273261 469.775867703273 57.984 0.6762 57.984 57.703 58.38 0 301 53 8 0 0 0 0.0071702 2 29412 84.097 70.426 1 1.0922 0.89766 0 11940000 5576000 6364200 15574 378 5892 6030 24270;24271 24270 HSLALGSATEDK 12 1 0 Unmodified _HSLALGSATEDK_ 0 0 0 Q5SRE5;Q9BS12 Q5SRE5 Q5SRE5 NUP188 Nucleoporin NUP188 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.8126 2 614.812042 1227.60953 NaN NaN NaN 0.031115 1.913E-05 NaN NaN NaN NaN 26.581 0.24166 26.581 26.503 26.745 0 0 0 0 0.00083731 1 12025 84.658 70.36 1 NaN NaN 0 6946300 6946300 0 15575 1816 5893 6031 24272 24272 HSLECTLILTEGDSAK 16 1 0 Unmodified _HSLECTLILTEGDSAK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.4388 2 887.438009 1772.86146 67056.84 0.62437 0.00055409 0.063745 5.6569E-05 0.68811 0.00061066 887.437853637816 891.444997464032 75.959 0.38274 75.959 75.664 76.047 0 58 32 5 0 0 0 2.7795E-05 2 44631 85.457 85.457 1 0.54756 0.56539 0 10993000 7287800 3704800 15576 1679 5894 6032 24273;24274 24273 HSLECTLILTEGDSAK 16 1 0 Unmodified _HSLECTLILTEGDSAK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 891.4449 2 887.438009 1772.86146 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.07 1 76.07 75.57 76.57 0 0 0 0 0.0017232 1 44808 56.122 40.233 1 15577 1679 5894 6032 24275 24275 HSLECTLILTEGDSAK 16 1 0 Unmodified _HSLECTLILTEGDSAK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 890.9545 2 887.438009 1772.86146 63942.93 0.43173 0.00038314 0.55978 0.00049677 0.99152 0.00087991 887.43864637055 891.445941303021 85.636 0.64719 85.636 85.403 86.05 0 179 39 6 0 0 0 0.033624 1 46848 37.594 37.594 1 1.0263 0.81395 0 4450200 2011100 2439100 15578 1679 5894 6032 24276 24276 HSLECTLILTEGDSAK 16 1 0 Unmodified _HSLECTLILTEGDSAK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 891.4523 2 887.438009 1772.86146 62107.6 0.27344 0.00024266 1.8131 0.001609 2.0865 0.0018516 887.438338837231 891.948961598172 85.674 0.86484 85.674 85.24 86.104 0 223 52 6 0 0 0 0.00047126 1 46148 49.333 49.333 1 0.92263 0.72924 0 3200200 1698700 1501600 15579 1679 5894 6032 24277 24277 HSLGSVQSTATQSNVEK 17 1 0 Unmodified _HSLGSVQSTATQSNVEK_ 0 0 0 Q9UIF8;Q8NC87 Q9UIF8 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.4474 2 886.942304 1771.87006 66388.45 0.75054 0.00066568 0.2485 0.0002204 0.99903 0.00088608 887.443445157277 890.950523377957 25.163 0.13558 25.163 25.084 25.219 0 16 4 5 0 0 0 4.1233E-05 1 10807 79.466 79.466 1 0.5815 0.58664 0 7889800 5273700 2616000 15580 2102 5895 6033 24278 24278 HSLNSSSASTTEPDFQK 17 1 0 Unmodified _HSLNSSSASTTEPDFQK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.4323 2 918.423944 1834.83334 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.064 1 31.064 30.564 31.564 0 0 0 0 0.00039103 1 15296 69.352 55.673 1 15581 1207 5896 6034 24279 24279 HSLNSSSASTTEPDFQK 17 1 0 Unmodified _HSLNSSSASTTEPDFQK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.4295 2 918.423944 1834.83334 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.123 1 31.123 30.623 31.623 -1.9073E-06 0 0 0 5.1208E-06 1 15327 94.023 71.825 1 15582 1207 5896 6034 24280 24280 HSLNSSSASTTEPDFQK 17 1 0 Unmodified _HSLNSSSASTTEPDFQK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 922.4322 2 918.423944 1834.83334 64071.73 0.25983 0.00023863 0.080271 7.3723E-05 0.3401 0.00031235 918.424193148235 922.431222548295 30.238 0.36484 30.238 30.068 30.433 1.9073E-06 121 29 7 0 0 0 7.2942E-05 4 14729 91.307 91.307 1 2.3961 2.4933 0 19005000 5863500 13142000 15583 1207 5896 6034 24281;24282;24283;24284 24281 HSLNSSSASTTEPDFQK 17 1 0 Unmodified _HSLNSSSASTTEPDFQK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.292 3 612.618388 1834.83334 76001.16 0.1322 8.099E-05 -0.69928 -0.00042839 -0.56707 -0.0003474 612.617310040444 615.289564085717 30.255 0.40928 30.255 30.037 30.446 -1.9073E-06 134 33 7 0 0 0 3.0604E-05 1 14777 60.093 52.117 1 2.1596 2.2073 0 25756000 7647300 18108000 15584 1207 5896 6034 24285 24285 HSLSGRPLK 9 1 1 Unmodified _HSLSGRPLK_ 0 0 1 P52272;A0A087X0X3;Q59ES8;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 332.198 3 332.197931 993.571963 103135.7 -0.39614 -0.0001316 0.3781 0.0001256 -0.01804 -5.9928E-06 332.19790202063 338.205511859451 16.204 0.6071 16.204 16.095 16.702 0 140 33 6 0 0 0 0.01829 2 3470 61.582 52.888 1 1.4453 1.6534 0 22127000 8633300 13493000 15585 1599 5897 6035 24286;24287 24287 HSMNILNR 8 0 1 Oxidation (M) _HSM(ox)NILNR_ HSM(1)NILNR HSM(77.92)NILNR 0 1 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24;Q9HBZ9;Q7Z4W5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.7576 2 500.753276 999.491998 85406.84 0.085231 4.268E-05 0.094169 4.7156E-05 0.1794 8.9835E-05 500.753212495129 505.757444481647 20.829 0.29662 20.829 20.682 20.979 0 37 11 4 0 0 0 0.0041672 1 7230 77.923 59.192 1 3.2268 3.3583 0 21901000 6020500 15881000 15586 593 5898 6036 24288 24288 452 HSNVNLTIFTAR 12 0 1 Unmodified _HSNVNLTIFTAR_ 0 0 0 Q6ICH2;B2CML4;Q96AK3;A0A087WX48;M4VR43;F2YHL7;Q8IUX4;M4VP52;Q59GY0;Q9NRW3 Q6ICH2;M4VP52 Q6ICH2 bK150C2.9;APOBEC3DE;APOBEC3D;APOBEC3F;APOBEC3C DNA dC->dU-editing enzyme APOBEC-3D;DNA dC->dU-editing enzyme APOBEC-3F;DNA dC->dU-editing enzyme APOBEC-3C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.8691 2 686.870225 1371.7259 71723.9 0.67041 0.00046048 -0.4473 -0.00030724 0.22311 0.00015325 686.869856430329 691.872966832292 76.358 0.76294 76.358 75.999 76.762 0 167 61 5 0 0 0 0.0021139 1 44950 59.418 59.418 1 0.9228 0.95997 0 22010000 11148000 10862000 15587 823;1357 5899 6037 24289 24289 HSNVNLTIFTAR 12 0 1 Unmodified _HSNVNLTIFTAR_ 0 0 0 Q6ICH2;B2CML4;Q96AK3;A0A087WX48;M4VR43;F2YHL7;Q8IUX4;M4VP52;Q59GY0;Q9NRW3 Q6ICH2;M4VP52 Q6ICH2 bK150C2.9;APOBEC3DE;APOBEC3D;APOBEC3F;APOBEC3C DNA dC->dU-editing enzyme APOBEC-3D;DNA dC->dU-editing enzyme APOBEC-3F;DNA dC->dU-editing enzyme APOBEC-3C ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.871 2 686.870225 1371.7259 NaN NaN NaN -0.70997 -0.00048766 NaN NaN NaN NaN 86.013 0.86112 86.013 85.684 86.545 -7.6294E-06 0 0 0 0.0011194 1 47129 81.625 51.061 1 NaN NaN 0 6928900 6928900 0 15588 823;1357 5899 6037 24290 24290 HSNVNLTIFTAR 12 0 1 Unmodified _HSNVNLTIFTAR_ 0 0 0 Q6ICH2;B2CML4;Q96AK3;A0A087WX48;M4VR43;F2YHL7;Q8IUX4;M4VP52;Q59GY0;Q9NRW3 Q6ICH2;M4VP52 Q6ICH2 bK150C2.9;APOBEC3DE;APOBEC3D;APOBEC3F;APOBEC3C DNA dC->dU-editing enzyme APOBEC-3D;DNA dC->dU-editing enzyme APOBEC-3F;DNA dC->dU-editing enzyme APOBEC-3C ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.8711 2 686.870225 1371.7259 NaN NaN NaN -0.28935 -0.00019875 NaN NaN NaN NaN 85.912 0.9315 85.912 85.431 86.363 7.6294E-06 0 0 0 0.012396 1 46220 54.023 34.261 1 NaN NaN 0 5523400 5523400 0 15589 823;1357 5899 6037 24291 24291 HSNVVILTTSNITEK 15 1 0 Unmodified _HSNVVILTTSNITEK_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.3082 3 552.636943 1654.889 86258.09 0.61662 0.00034077 -0.65707 -0.00036312 -0.040453 -2.2356E-05 552.636397725558 555.642252318142 67.602 0.56393 67.602 67.241 67.805 0 134 48 5 0 0 0 0.00046319 1 39086 47.568 47.568 1 1.7795 1.8472 0 11368000 3326100 8041700 15590 1763 5900 6038 24292 24292 HSNVVILTTSNITEK 15 1 0 Unmodified _HSNVVILTTSNITEK_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.4517 2 828.451776 1654.889 69608.59 0.83923 0.00069526 -0.32345 -0.00026796 0.51578 0.0004273 828.450940015273 832.458767343749 65.316 0.41673 65.316 65.135 65.551 0 73 33 4 0 0 0 0.00026904 1 38538 62.378 62.378 1 1.7111 1.7271 0 8096400 2515700 5580700 15591 1763 5900 6038 24293 24293 HSPIAPSSPSPQVLAQK 17 1 0 Unmodified _HSPIAPSSPSPQVLAQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.6566 3 581.984454 1742.93153 80934.44 0.67013 0.00039 0.17757 0.00010334 0.8477 0.00049335 581.984515161353 584.9902819706 56.368 0.55541 56.368 56.075 56.63 -3.8147E-06 221 48 6 0 0 0 6.0387E-05 2 31670 50.079 50.079 1 1.2733 1.2741 0 26647000 12604000 14043000 15592 2059 5901 6039 24294;24295 24294 HSPIAPSSPSPQVLAQK 17 1 0 Unmodified _HSPIAPSSPSPQVLAQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.481 2 872.473043 1742.93153 NaN NaN NaN 0.24106 0.00021032 NaN NaN NaN NaN 56.354 0.31679 56.354 56.194 56.511 -3.8147E-06 0 0 0 2.627E-07 1 31735 90.759 71.516 1 NaN NaN 0 5120300 0 5120300 15593 2059 5901 6039 24296 24296 HSPIAPSSPSPQVLAQK 17 1 0 Unmodified _HSPIAPSSPSPQVLAQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.3189 3 581.984454 1742.93153 79336.86 0.59567 0.00034667 -0.17577 -0.00010229 0.41991 0.00024438 581.984263579341 584.655839301655 54.772 0.45691 54.772 54.535 54.992 3.8147E-06 159 39 5 0 0 0 0.00061328 1 31272 36.943 29.811 1 1.2959 1.3902 0 22906000 8660100 14246000 15594 2059 5901 6039 24297 24297 HSPIAPSSPSPQVLAQK 17 1 0 Unmodified _HSPIAPSSPSPQVLAQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.4741 2 872.473043 1742.93153 66855.25 0.5031 0.00043894 0.13372 0.00011667 0.63682 0.00055561 872.473292497966 876.981531259307 54.792 0.3348 54.792 54.579 54.914 0 72 28 4 0 0 0 5.6621E-05 3 31291 67.456 67.456 1 0.99419 1.0401 0 10858000 4817100 6041400 15595 2059 5901 6039 24298;24299;24300 24299 HSPIAPSSPSPQVLAQK 17 1 0 Unmodified _HSPIAPSSPSPQVLAQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.9905 3 581.984454 1742.93153 78042.28 0.661 0.00038469 -0.10153 -5.9086E-05 0.55947 0.0003256 582.318523890387 584.655773553494 65.318 0.72711 65.318 65.035 65.762 0 279 54 8 0 0 0 0.031634 1 33625 18.58 18.58 1 2.0038 1.6069 0 8244200 3214700 5029500 15596 2059 5901 6039 24301 24301 HSPIAPSSPSPQVLAQK 17 1 0 Unmodified _HSPIAPSSPSPQVLAQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.3185 3 581.984454 1742.93153 79146.84 0.29648 0.00017254 0.054753 3.1865E-05 0.35123 0.00020441 581.984448260544 584.655924683462 65.606 0.69659 65.606 65.354 66.051 0 271 54 8 0 0 0 0.00060305 2 33112 37.177 37.177 1 1.8274 1.4924 0 5639300 2201500 3437800 15597 2059 5901 6039 24302;24303 24303 HSPIAPSSPSPQVLAQK 17 1 0 Unmodified _HSPIAPSSPSPQVLAQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 876.9823 2 872.473043 1742.93153 66510.66 0.11105 9.6886E-05 0.3341 0.00029149 0.44515 0.00038838 872.473597561465 876.48059777267 65.636 0.63079 65.636 65.354 65.985 0 156 49 5 0 0 0 0.021438 1 33096 20.106 20.106 1 1.9094 1.55 0 2854100 1125600 1728500 15598 2059 5901 6039 24304 24304 HSPLTQMGPAK 11 1 0 Oxidation (M) _HSPLTQM(ox)GPAK_ HSPLTQM(1)GPAK HSPLTQM(43.15)GPAK 0 1 0 A0A0S2Z5D2;Q53G62;A0A0S2Z563;A0A0S2Z5H0;Q9Y2Q9;E5RGC7;H0YAT2;H7C5V3;U3KQQ8;H0YC42;A5Y5A3 A0A0S2Z5D2 A0A0S2Z5D2 MRPS28 28S ribosomal protein S28, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8069 2 591.800423 1181.58629 78882.88 0.72123 0.00042682 -1.5242 -0.00090202 -0.80298 -0.0004752 591.800436410791 595.807012453541 18.408 0.21458 18.408 18.261 18.476 0 42 9 8 0 0 0 0.010499 1 5341 43.149 32.439 1 2.5791 2.6073 0 10122000 2829700 7292200 15599 576 5902 6040 24305 24305 431 HSPLTQMGPAK 11 1 0 Oxidation (M) _HSPLTQM(ox)GPAK_ HSPLTQM(1)GPAK HSPLTQM(41.35)GPAK 0 1 0 A0A0S2Z5D2;Q53G62;A0A0S2Z563;A0A0S2Z5H0;Q9Y2Q9;E5RGC7;H0YAT2;H7C5V3;U3KQQ8;H0YC42;A5Y5A3 A0A0S2Z5D2 A0A0S2Z5D2 MRPS28 28S ribosomal protein S28, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8059 2 591.800423 1181.58629 NaN NaN NaN -2.1153 -0.0012518 NaN NaN NaN NaN 18.324 0.26521 18.324 18.17 18.435 0 0 0 0 0.020697 1 5016 41.347 22.571 1 NaN NaN 0 5294500 0 5294500 15600 576 5902 6040 24306 24306 431 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.9796 3 613.974283 1838.90102 80816.81 0.34588 0.00021236 -0.17484 -0.00010735 0.17104 0.00010501 614.308688329383 616.97950199966 87.538 0.13241 87.538 87.465 87.597 0 25 12 4 0 0 0 2.7629E-07 1 52818 75.682 65.486 1 0.91244 0.95034 0 11631000 5426600 6203900 15601 81 5903 6041 24307 24307 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 924.4647 2 920.457787 1838.90102 64185.51 0.68604 0.00063147 -0.49832 -0.00045868 0.18772 0.00017279 920.456680404093 924.464805296104 87.872 0.69361 87.872 87.713 88.406 0 120 58 5 0 0 0 3.7361E-110 1 52979 235.88 227.57 1 1.9543 1.9307 0 25527000 9847000 15680000 15602 81 5903 6041 24308 24308 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.3092 3 613.974283 1838.90102 75143.35 0.56342 0.00034593 -0.087071 -5.3459E-05 0.47635 0.00029247 613.97509152201 616.979534328456 87.9 0.52455 87.9 87.624 88.149 0 154 49 5 0 0 0 7.142E-07 1 53074 84.071 80.103 1 1.5617 1.6843 0 34263000 10573000 23691000 15603 81 5903 6041 24309 24309 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 920.459 2 920.457787 1838.90102 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.715 1 87.715 87.215 88.215 0 0 0 0 6.0074E-05 1 52913 115.26 97.664 1 15604 81 5903 6041 24310 24310 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 924.9672 2 920.457787 1838.90102 64342.75 0.76683 0.00070583 -0.24217 -0.0002229 0.52466 0.00048293 920.959328717306 924.96607868247 85.851 1.0244 85.851 85.086 86.11 0 220 80 5 0 0 0 0.023276 1 52327 27.098 27.098 1 1.7327 1.9173 0 45422000 16864000 28558000 15605 81 5903 6041 24311 24311 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.9796 3 613.974283 1838.90102 78210.3 0.64028 0.00039312 -0.75362 -0.0004627 -0.11333 -6.9583E-05 614.307688866023 616.645742967582 85.734 0.75464 85.734 85.324 86.078 -7.6294E-06 317 56 10 0 0 0 1.9178E-09 3 52963 101.04 101.04 1 1.6765 1.8778 0 54281000 16001000 38279000 15606 81 5903 6041 24312;24313;24314 24313 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.9786 3 613.974283 1838.90102 NaN NaN NaN 0.75187 0.00046163 NaN NaN NaN NaN 86.159 0.2332 86.159 86.078 86.311 0 0 0 0 0.00050144 1 53105 62.813 51.708 1 NaN NaN 0 14672000 0 14672000 15607 81 5903 6041 24315 24315 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 920.4566 2 920.457787 1838.90102 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.204 1 86.204 85.704 86.704 0 0 0 0 0.0098424 1 53139 47.506 24.27 1 15608 81 5903 6041 24316 24316 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 924.9667 2 920.457787 1838.90102 63234.57 0.63248 0.00058217 -0.09816 -9.0352E-05 0.53432 0.00049182 920.456870520289 924.465001879724 98.992 0.97246 98.992 98.692 99.664 0 285 55 7 0 0 0 1.1765E-33 1 55765 153.94 153.94 1 2.9611 2.3492 0 18868000 4930200 13938000 15609 81 5903 6041 24317 24317 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 924.4658 2 920.457787 1838.90102 62790.93 0.47783 0.00043982 0.1508 0.0001388 0.62863 0.00057863 920.457166130857 924.465071196028 98.706 0.92958 98.706 98.468 99.398 0 272 54 7 0 0 0 4.2727E-68 4 54846 193.47 193.47 1 2.8679 2.295 0 21331000 5532700 15798000 15610 81 5903 6041 24318;24319;24320;24321 24319 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.6463 3 613.974283 1838.90102 NaN NaN NaN 0.15003 9.2113E-05 NaN NaN NaN NaN 98.699 0.90208 98.699 98.468 99.37 0 0 0 0 5.7545E-07 1 54848 87.088 83.832 1 NaN NaN 0 10158000 0 10158000 15611 81 5903 6041 24322 24322 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.007 3 685.671152 2053.99163 NaN NaN NaN -0.034781 -2.3848E-05 NaN NaN NaN NaN 94.239 1.0412 94.239 93.758 94.799 0 0 0 0 2.77E-32 3 57036 103.73 98.762 1 NaN NaN 0 113770000 113770000 0 15612 908 5904 6042 24323;24324;24325 24323 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1028.5073 2 1028.00309 2053.99163 NaN NaN NaN -0.25965 -0.00026692 NaN NaN NaN NaN 94.24 0.71835 94.24 93.97 94.688 7.6294E-06 0 0 0 0.00071214 1 57320 54.09 41.082 1 NaN NaN 0 28228000 28228000 0 15613 908 5904 6042 24326 24326 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.0081 3 685.671152 2053.99163 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.193 1 94.193 93.693 94.693 0 0 0 0 0.00017119 1 57199 68.168 42.022 1 15614 908 5904 6042 24327 24327 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1028.0031 2 1028.00309 2053.99163 60447.45 0.4311 0.00044317 -0.003824 -3.9311E-06 0.42727 0.00043924 1028.50456131571 1033.50878033642 92.92 0.50845 92.92 92.653 93.161 0 149 42 5 0 0 0 4.8929E-08 2 57479 90.444 90.444 1 0.8831 0.96353 0 29775000 17060000 12714000 15615 908 5904 6042 24328;24329 24328 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3421 3 685.671152 2053.99163 73404.6 0.70511 0.00048347 -0.029825 -2.045E-05 0.67528 0.00046302 685.671086483623 689.007193322171 92.928 1.0625 92.928 92.624 93.686 0 643 91 9 0 0 0 2.3771E-17 2 57561 119.38 119.38 1 0.87726 1.0079 0 195740000 102580000 93159000 15616 908 5904 6042 24330;24331 24330 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1027.5005 2 1028.00309 2053.99163 60447.43 0.46998 0.00048314 -0.43402 -0.00044618 0.035962 3.6969E-05 1028.00239994645 1033.50896580317 93.155 0.64767 93.155 92.921 93.568 0 136 57 5 0 0 0 0.010087 1 57926 26.124 26.124 1 0.56456 0.61382 0 28615000 18314000 10301000 15617 908 5904 6042 24332 24332 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1033.0056 2 1028.00309 2053.99163 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.708 1 92.708 92.208 93.208 -7.6294E-06 0 0 0 2.7702E-06 1 57468 81.311 67.631 1 15618 908 5904 6042 24333 24333 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1033.0078 2 1028.00309 2053.99163 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.206 1 93.206 92.706 93.706 7.6294E-06 0 0 0 9.7405E-05 1 57830 66.533 54.172 1 15619 908 5904 6042 24334 24334 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.0065 3 685.671152 2053.99163 72740.69 0.6662 0.00045679 -0.11902 -8.1611E-05 0.54718 0.00037518 686.00542675518 689.007163423216 106.74 0.92947 106.74 106.46 107.39 7.6294E-06 451 57 11 0 0 0 1.1151E-08 2 60966 82.36 82.36 1 1.5639 1.3521 0 110750000 42374000 68371000 15620 908 5904 6042 24335;24336 24336 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3426 3 685.671152 2053.99163 72872.34 0.6126 0.00042005 0.035111 2.4074E-05 0.64772 0.00044412 686.005537523192 689.007261720637 106.54 0.90921 106.54 106.22 107.13 0 449 56 11 0 0 0 1.0687E-05 2 59897 53.625 53.625 1 1.4939 1.3038 0 81931000 32783000 49149000 15621 908 5904 6042 24337;24338 24337 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1033.5085 2 1028.00309 2053.99163 60313.2 0.39488 0.00040593 0.081152 8.3425E-05 0.47603 0.00048936 1028.50456101914 1033.007181126 106.55 0.72775 106.55 106.27 107 7.6294E-06 294 45 9 0 0 0 0.0064449 1 59948 46.68 46.68 1 1.5472 1.2887 0 15756000 6334700 9421800 15622 908 5904 6042 24339 24339 HSQFIGYPITLFVEK 15 1 0 Unmodified _HSQFIGYPITLFVEK_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;G3V2J8;Q58FG0 K9JA46 K9JA46 EL52;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.66 3 593.654045 1777.94031 80611.83 0.70353 0.00041765 0.25434 0.00015099 0.95787 0.00056864 593.988208742018 596.325660259756 127.66 0.6093 127.66 127.37 127.98 0 114 23 8 0 0 0 0.041714 2 76888 18.156 18.156 1 2.026 1.6257 0 2858100 926310 1931800 15623 1348 5905 6043 24340;24341 24340 HSQFIGYPITLFVEK 15 1 0 Unmodified _HSQFIGYPITLFVEK_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;G3V2J8;Q58FG0 K9JA46 K9JA46 EL52;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.3265 3 593.654045 1777.94031 79067.66 0.68846 0.00040871 0.022439 1.3321E-05 0.7109 0.00042203 593.654074840581 596.325396580408 127.34 0.60379 127.34 127.08 127.68 0 100 25 6 0 0 0 0.025184 1 75767 21.534 21.534 1 2.1151 1.7161 0 2825200 735320 2089900 15624 1348 5905 6043 24342 24342 HSQFIGYPITLFVEK 15 1 0 Unmodified _HSQFIGYPITLFVEK_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;G3V2J8;Q58FG0 K9JA46 K9JA46 EL52;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 893.9861 2 889.97743 1777.94031 65785.49 0.33554 0.00029862 0.61172 0.00054442 0.94726 0.00084304 890.479244295393 893.984813116609 127.32 0.73543 127.32 126.98 127.71 0 134 30 7 0 0 0 0.0011147 1 75827 57.267 57.267 1 2.3725 1.9465 0 5285500 1586600 3698900 15625 1348 5905 6043 24343 24343 HSQFLGYPITLYLEK 15 1 0 Unmodified _HSQFLGYPITLYLEK_ 0 0 0 Q58FF8 Q58FF8 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 908.9905 2 904.982712 1807.95087 64402.32 0.71973 0.00065135 0.21645 0.00019588 0.93618 0.00084723 905.484387041114 909.491492672582 114.11 1.3836 114.11 113.44 114.82 0 582 99 8 0 0 0 2.9844E-47 4 72542 176.89 0 1 2.4362 2.7194 0 62544000 17958000 44586000 15626 1800 5906 6044 24344;24345;24346;24347 24346 HSQFLGYPITLYLEK 15 1 0 Unmodified _HSQFLGYPITLYLEK_ 0 0 0 Q58FF8 Q58FF8 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.9916 3 603.657567 1807.95087 77940.4 0.75011 0.00045281 -0.063357 -3.8246E-05 0.68675 0.00041456 603.991743319663 606.32887258347 114.15 1.3078 114.15 113.46 114.77 7.6294E-06 465 93 8 0 0 0 0.0001303 2 72221 45.14 0 1 2.3517 2.4904 0 31281000 9808400 21472000 15627 1800 5906 6044 24348;24349 24349 HSQFLGYPITLYLEK 15 1 0 Unmodified _HSQFLGYPITLYLEK_ 0 0 0 Q58FF8 Q58FF8 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.4838 2 904.982712 1807.95087 64800.04 0.66498 0.0006018 0.082508 7.4668E-05 0.74749 0.00067646 905.483846256289 908.989873169493 112.77 1.3326 112.77 112.22 113.55 0 543 93 8 0 0 0 4.5862E-15 4 73061 127.27 0 1 2.5018 2.8021 0 81946000 23274000 58672000 15628 1800 5906 6044 24350;24351;24352;24353 24351 HSQFLGYPITLYLEK 15 1 0 Unmodified _HSQFLGYPITLYLEK_ 0 0 0 Q58FF8 Q58FF8 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.6583 3 603.657567 1807.95087 77774.23 0.66658 0.00040239 0.21111 0.00012744 0.87769 0.00052982 603.991946129423 606.32914396374 112.79 1.1651 112.79 112.25 113.41 0 452 81 9 0 0 0 0.00014031 2 73062 53.395 0 1 2.3636 2.6122 0 44788000 12536000 32252000 15629 1800 5906 6044 24354;24355 24354 HSQFLGYPITLYLEK 15 1 0 Unmodified _HSQFLGYPITLYLEK_ 0 0 0 Q58FF8 Q58FF8 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.6581 3 603.657567 1807.95087 77761.46 0.82041 0.00049525 0.25551 0.00015424 1.0759 0.00064949 603.657717150486 606.329043760099 123.28 0.66673 123.28 123 123.67 0 172 28 8 0 0 0 0.0058199 1 73702 20.853 0 1 1.5539 1.2162 0 16456000 5730100 10726000 15630 1800 5906 6044 24356 24356 HSQFLGYPITLYLEK 15 1 0 Unmodified _HSQFLGYPITLYLEK_ 0 0 0 Q58FF8 Q58FF8 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 904.985 2 904.982712 1807.95087 64483.34 0.62562 0.00056618 -0.23096 -0.00020902 0.39466 0.00035716 904.982787985996 909.491003350303 123.03 0.7784 123.03 122.68 123.46 0 269 37 12 0 0 0 0.00022329 2 72471 68.83 0 1 1.4037 1.1668 0 37884000 15264000 22620000 15631 1800 5906 6044 24357;24358 24358 HSQFLGYPITLYLEK 15 1 0 Unmodified _HSQFLGYPITLYLEK_ 0 0 0 Q58FF8 Q58FF8 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.6585 3 603.657567 1807.95087 77623.52 0.85593 0.00051669 -0.089739 -5.4172E-05 0.7662 0.00046252 603.657507545743 606.663228592412 123.04 0.59337 123.04 122.79 123.38 0 168 28 7 0 0 0 0.024005 1 72619 14.266 0 1 1.6505 1.3239 0 18783000 7332700 11451000 15632 1800 5906 6044 24359 24359 HSQPATPTPLQSR 13 0 1 Unmodified _HSQPATPTPLQSR_ 0 0 0 Q9NR12 Q9NR12 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.3773 2 710.370589 1418.72663 NaN NaN NaN 0.49585 0.00035224 NaN NaN NaN NaN 26.206 0.43005 26.206 25.923 26.353 0 0 0 0 0.0005454 1 11694 82.494 55.38 1 NaN NaN 0 6807700 0 6807700 15633 2064 5907 6045 24360 24360 HSQPATPTPLQSR 13 0 1 Unmodified _HSQPATPTPLQSR_ 0 0 0 Q9NR12 Q9NR12 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.371 2 710.370589 1418.72663 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.683 1 25.683 25.183 26.183 0 0 0 0 0.017404 1 11279 49.3 30.52 1 15634 2064 5907 6045 24361 24361 HSSGCAFLSVK 11 1 0 Unmodified _HSSGCAFLSVK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.7932 2 596.792598 1191.57064 77690.5 0.85585 0.00051077 1.3137 0.00078401 2.1696 0.0012948 596.792509756069 600.799680118857 41.697 0.74506 41.697 41.448 42.193 0 308 59 8 0 0 0 3.9827E-09 2 21939 124.81 81.872 1 0.78278 0.87986 0 70150000 43402000 26747000 15635 498 5908 6046 24362;24363 24363 HSSGCAFLSVK 11 1 0 Unmodified _HSSGCAFLSVK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.7932 2 596.792598 1191.57064 77279.75 0.32208 0.00019221 -0.0094358 -5.6312E-06 0.31264 0.00018658 596.792690703248 600.799749851793 47.024 1.023 47.024 46.784 47.807 3.8147E-06 331 77 6 0 0 0 2.8462E-12 2 22779 138.08 112.48 1 1.1886 0.97188 0 34384000 14871000 19513000 15636 498 5908 6046 24364;24365 24365 HSSGCAFLSVK 11 1 0 Unmodified _HSSGCAFLSVK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.7928 2 596.792598 1191.57064 78655.63 0.24974 0.00014904 0.69598 0.00041536 0.94572 0.0005644 596.792842840845 600.79995651692 46.739 0.98238 46.739 46.417 47.4 0 242 67 5 0 0 0 6.6173E-08 1 21966 114.86 97.762 1 1.1748 0.9698 0 30966000 13499000 17467000 15637 498 5908 6046 24366 24366 HSSLITPLQAVAQR 14 0 1 Unmodified _HSSLITPLQAVAQR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.931 2 760.930814 1519.84708 NaN NaN NaN 0.32065 0.000244 NaN NaN NaN NaN 81.946 0.97367 81.946 81.545 82.518 0 0 0 0 0.00066612 2 49124 96.015 85.783 1 NaN NaN 0 13796000 13796000 0 15638 1665 5909 6047 24367;24368 24368 HSSLITPLQAVAQR 14 0 1 Unmodified _HSSLITPLQAVAQR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.9335 2 760.930814 1519.84708 70343.91 0.85997 0.00065437 0.23182 0.0001764 1.0918 0.00083078 760.931473812975 765.934589527248 79.458 0.76836 79.458 79.223 79.991 0 272 63 7 0 0 0 2.0694E-06 2 48252 138.25 121.99 1 0.7135 0.80415 0 46680000 28371000 18309000 15639 1665 5909 6047 24369;24370 24370 HSSLITPLQAVAQR 14 0 1 Unmodified _HSSLITPLQAVAQR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.9352 2 760.930814 1519.84708 69185.58 0.61809 0.00047032 0.044718 3.4027E-05 0.66281 0.00050435 760.931113065856 765.93457861545 92.112 0.79675 92.112 91.876 92.673 0 228 42 7 0 0 0 0.00016878 2 51236 88.596 79.274 1 0.41754 0.34772 0 10689000 7804100 2884600 15640 1665 5909 6047 24371;24372 24372 HSSLITPLQAVAQR 14 0 1 Unmodified _HSSLITPLQAVAQR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.9574 3 507.622968 1519.84708 85808.47 0.4004 0.00020325 -0.19209 -9.751E-05 0.20831 0.00010574 507.957172809215 510.958939954972 92.178 0.76735 92.178 91.863 92.63 0 171 41 6 0 0 0 0.00043981 1 51424 53.754 49.206 1 0.33844 0.28908 0 5752100 4129800 1622300 15641 1665 5909 6047 24373 24373 HSSLITPLQAVAQR 14 0 1 Unmodified _HSSLITPLQAVAQR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 760.9321 2 760.930814 1519.84708 70584.56 0.56762 0.00043192 0.99513 0.00075723 1.5628 0.0011891 760.931899626912 765.934871638908 91.655 0.60715 91.655 91.422 92.029 7.6294E-06 224 39 8 0 0 0 0.00020823 1 50062 89.266 80.262 1 0.41267 0.33421 0 10418000 7646900 2770600 15642 1665 5909 6047 24374 24374 HSSLITPLQAVAQR 14 0 1 Unmodified _HSSLITPLQAVAQR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.6233 3 507.622968 1519.84708 NaN NaN NaN 0.0037209 1.8888E-06 NaN NaN NaN NaN 91.741 0.8245 91.741 91.409 92.234 0 0 0 0 0.00040672 1 50216 71.806 64.436 1 NaN NaN 0 3842500 3842500 0 15643 1665 5909 6047 24375 24375 HSSTPNSSEFSR 12 0 1 Unmodified _HSSTPNSSEFSR_ 0 0 0 Q8N9Q2 Q8N9Q2 Q8N9Q2 SREK1IP1 Protein SREK1IP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.2997 2 668.29983 1334.58511 73116.57 0.76933 0.00051414 0.019111 1.2772E-05 0.78844 0.00052692 668.2997053238 673.303812649652 19.259 0.23953 19.259 19.139 19.379 0 45 11 6 0 0 0 7.2823E-18 2 5928 142.83 137.05 1 0.71755 0.7482 0 21474000 10822000 10652000 15644 1915 5910 6048 24376;24377 24376 HSSTPNSSEFSR 12 0 1 Unmodified _HSSTPNSSEFSR_ 0 0 0 Q8N9Q2 Q8N9Q2 Q8N9Q2 SREK1IP1 Protein SREK1IP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.2999 2 668.29983 1334.58511 73975.85 0.22319 0.00014915 0.34765 0.00023233 0.57084 0.00038149 668.300040616751 673.304040302253 19.151 0.23073 19.151 19.051 19.282 0 31 8 6 0 0 0 4.4362E-23 2 5611 160.18 155.88 1 0.80771 0.88252 0 37165000 20863000 16302000 15645 1915 5910 6048 24378;24379 24378 HSSTPNSSEFSR 12 0 1 Unmodified _HSSTPNSSEFSR_ 0 0 0 Q8N9Q2 Q8N9Q2 Q8N9Q2 SREK1IP1 Protein SREK1IP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.2998 2 668.29983 1334.58511 73157.54 0.10018 6.6949E-05 0.3208 0.00021439 0.42097 0.00028134 668.299906012487 673.304290610061 20.419 0.47973 20.419 20.234 20.714 0 71 18 7 0 0 0 0.015684 2 5861 42.718 42.718 1 0.79407 0.67503 0 5304200 2619300 2684900 15646 1915 5910 6048 24380;24381 24381 HSSTPNSSEFSR 12 0 1 Unmodified _HSSTPNSSEFSR_ 0 0 0 Q8N9Q2 Q8N9Q2 Q8N9Q2 SREK1IP1 Protein SREK1IP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.2998 2 668.29983 1334.58511 73783.5 0.072469 4.8431E-05 0.12158 8.1252E-05 0.19405 0.00012968 668.299756875786 673.304019772147 20.416 0.42951 20.416 20.212 20.641 -1.9073E-06 83 19 7 0 0 0 0.016702 1 5306 42.001 42.001 1 0.83891 0.69602 0 5450800 3192000 2258800 15647 1915 5910 6048 24382 24382 HSTSPSLDSEYNEELNEDDSQSDEK 25 1 0 Unmodified _HSTSPSLDSEYNEELNEDDSQSDEK_ 0 0 0 P35251;H0Y9P8 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 952.7244 3 952.391836 2854.15368 63065.11 0.62335 0.00059367 -0.51103 -0.0004867 0.11231 0.00010696 952.725896300042 955.397146741388 52.351 0.45487 52.351 52.128 52.583 0 107 34 6 0 0 0 4.416E-12 3 29833 62.193 62.193 1 0.4876 0.50296 0 11511000 6269500 5241400 15648 1542 5911 6049 24383;24384;24385 24384 HSVGVVIGR 9 0 1 Unmodified _HSVGVVIGR_ 0 0 0 A0A087WTP3;Q92945;M0R0I5;B4DV73 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2786 2 462.274701 922.534849 NaN NaN NaN -0.60366 -0.00027905 NaN NaN NaN NaN 29.099 0.15598 29.099 29.032 29.188 -1.9073E-06 0 0 0 0.0041134 1 13983 77.072 44.462 1 NaN NaN 0 11916000 0 11916000 15649 403 5912 6050 24386 24386 HSVIPPAAR 9 0 1 Unmodified _HSVIPPAAR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2791 2 474.274701 946.534849 NaN NaN NaN 0.48688 0.00023091 NaN NaN NaN NaN 24.042 0.85171 24.042 23.57 24.422 0 0 0 0 8.5498E-05 1 9843 101.28 67.926 1 NaN NaN 0 37749000 0 37749000 15650 2103 5913 6051 24387 24387 HSVIPPAAR 9 0 1 Unmodified _HSVIPPAAR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2851 2 474.274701 946.534849 NaN NaN NaN 0.561 0.00026607 NaN NaN NaN NaN 24.536 0.66165 24.536 24.422 25.084 0 0 0 0 0.035023 1 10530 51.854 30.554 1 NaN NaN 0 21383000 0 21383000 15651 2103 5913 6051 24388 24388 HSVIPPAAR 9 0 1 Unmodified _HSVIPPAAR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 479.2787 2 474.274701 946.534849 87501.69 0.1338 6.3457E-05 0.21607 0.00010248 0.34987 0.00016593 474.274711913202 479.278860163582 26.955 2.3426 26.955 25.995 28.338 0 320 107 5 0 0 0 0.00037702 1 10358 100.19 82.153 1 32.065 27.569 0 7758100 358890 7399200 15652 2103 5913 6051 24389 24389 HSVIPPAAR 9 0 1 Unmodified _HSVIPPAAR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 479.2787 2 474.274701 946.534849 NaN NaN NaN 0.12659 6.0037E-05 NaN NaN NaN NaN 26.544 2.5869 26.544 25.626 28.213 -1.9073E-06 0 0 0 0.015432 2 9382 62.464 50.695 1 NaN NaN 0 5793400 0 5793400 15653 2103 5913 6051 24390;24391 24390 HTAAPTDPADGPV 13 0 0 Unmodified _HTAAPTDPADGPV_ 0 0 0 A0A024QYW3;Q04941 A0A024QYW3 A0A024QYW3 PLP2 Proteolipid protein 2 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.7971 2 624.796392 1247.57823 NaN NaN NaN 0.37279 0.00023292 NaN NaN NaN NaN 39.446 0.38121 39.446 39.3 39.682 0 0 0 0 5.5286E-06 1 20440 101.64 72.482 1 15654 7 5914 6052 24392 24392 HTAAPTDPADGPV 13 0 0 Unmodified _HTAAPTDPADGPV_ 0 0 0 A0A024QYW3;Q04941 A0A024QYW3 A0A024QYW3 PLP2 Proteolipid protein 2 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.7973 2 624.796392 1247.57823 NaN NaN NaN 0.29915 0.00018691 NaN NaN NaN NaN 38.328 0.432 38.328 38.191 38.623 0 0 0 0 6.5398E-09 1 20060 109.71 101.18 1 15655 7 5914 6052 24393 24393 HTASINDLER 10 0 1 Unmodified _HTASINDLER_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.2927 2 578.291276 1154.568 77770.91 0.69565 0.00040229 1.5622 0.0009034 2.2578 0.0013057 578.292151353762 583.297266321519 28.155 0.26079 28.155 28.025 28.286 1.9073E-06 25 11 5 0 0 0 0.035161 1 13378 40.725 25.083 1 0.42557 0.47419 0 43817000 26327000 17490000 15656 873 5915 6053 24394 24394 HTDPQISGPLADLFR 15 0 1 Unmodified _HTDPQISGPLADLFR_ 0 0 0 Q9UQR0 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.2903 3 556.289766 1665.84747 NaN NaN NaN 0.26473 0.00014727 NaN NaN NaN NaN 122.05 0.31445 122.05 121.89 122.21 0 0 0 0 0.036652 1 72707 28.032 23.483 1 NaN NaN 0 1127600 1127600 0 15657 2118 5916 6054 24395 24395 HTDTDVLEACSK 12 1 0 Unmodified _HTDTDVLEACSK_ 0 0 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;Q6AI02;B4DQ46 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2;DKFZp686P168 Cohesin subunit SA-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.8187 2 688.311548 1374.60854 73826.72 1.0434 0.00071818 -0.37044 -0.00025498 0.67295 0.0004632 688.311508266265 692.31739332096 28.637 0.23609 28.637 28.54 28.776 0 40 12 6 0 0 0 0.017891 1 13617 41.164 31.21 1 0.98882 0.98481 0 7958200 3708600 4249500 15658 863 5917 6055 24396 24396 HTDTDVLEACSK 12 1 0 Unmodified _HTDTDVLEACSK_ 0 0 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;Q6AI02;B4DQ46 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2;DKFZp686P168 Cohesin subunit SA-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.3173 2 688.311548 1374.60854 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.803 1 27.803 27.303 28.303 0 0 0 0 0.0082285 1 13063 59.265 48.113 1 15659 863 5917 6055 24397 24397 HTDTDVLEACSK 12 1 0 Unmodified _HTDTDVLEACSK_ 0 0 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;Q6AI02;B4DQ46 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2;DKFZp686P168 Cohesin subunit SA-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.8194 2 688.311548 1374.60854 75149.06 0.28869 0.00019871 0.020046 1.3798E-05 0.30873 0.00021251 688.812922436832 692.318741366579 32.371 0.3858 32.371 32.23 32.616 0 53 17 6 0 0 0 0.013092 1 13922 44.543 40.092 1 0.9684 0.81418 0 1594100 782650 811460 15660 863 5917 6055 24398 24398 HTDVQFYTEVGEITTDLGK 19 1 0 Unmodified _HTDVQFYTEVGEITTDLGK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1081.0341 2 1077.02349 2152.03243 NaN NaN NaN 0.59446 0.00064025 NaN NaN NaN NaN 111.05 0.22603 111.05 110.85 111.08 7.6294E-06 0 0 0 0.0016653 1 69716 50.806 42.702 1 NaN NaN 0 6923400 0 6923400 15661 2148 5918 6056 24399 24399 HTDVQFYTEVGEITTDLGK 19 1 0 Unmodified _HTDVQFYTEVGEITTDLGK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.023 3 718.351419 2152.03243 NaN NaN NaN 0.34291 0.00024633 NaN NaN NaN NaN 111.01 0.78938 111.01 110.57 111.36 0 0 0 0 2.1155E-07 2 69799 78.708 75.067 1 NaN NaN 0 15804000 0 15804000 15662 2148 5918 6056 24400;24401 24401 HTDVQFYTEVGEITTDLGK 19 1 0 Unmodified _HTDVQFYTEVGEITTDLGK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1081.5347 2 1077.02349 2152.03243 56060.66 0.50012 0.00053864 1.0615 0.0011432 1.5616 0.0016819 1077.02782964779 1081.53369659708 109.94 1.0794 109.94 109.64 110.72 0 217 72 7 0 0 0 0.00026173 2 70728 44.968 44.968 1 0.51996 0.52617 0 26639000 14633000 12006000 15663 2148 5918 6056 24402;24403 24403 HTEMITTLK 9 1 0 Oxidation (M) _HTEM(ox)ITTLK_ HTEM(1)ITTLK HTEM(80.17)ITTLK 0 1 0 O75475 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.2908 2 545.284074 1088.5536 83869.71 0.28629 0.00015611 0.31123 0.00016971 0.59751 0.00032582 545.283981108241 549.291279629845 24.431 0.28563 24.431 24.308 24.594 0 48 13 6 0 0 0 0.00089179 1 10189 80.165 42.616 1 1.1762 1.1953 0 12672000 5291200 7381000 15664 1405 5919 6057 24404 24404 1083 HTGPNSPDTANDGFVR 16 0 1 Unmodified _HTGPNSPDTANDGFVR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2;P55795 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 842.8903 2 842.887332 1683.76011 67182.95 0.80344 0.00067721 0.2919 0.00024604 1.0953 0.00092325 842.887706768254 847.891614333002 31.565 0.54946 31.565 31.26 31.809 -1.9073E-06 222 51 7 0 0 0 0.0017171 2 15469 43.991 43.991 1 1.6635 1.7675 0 42576000 15080000 27495000 15665 1231;1617 5920 6058 24405;24406 24406 HTGPNSPDTANDGFVR 16 0 1 Unmodified _HTGPNSPDTANDGFVR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2;P55795 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.5947 3 562.260647 1683.76011 80147.07 0.74461 0.00041866 -0.38455 -0.00021622 0.36006 0.00020245 562.260221630714 565.596555112239 31.575 0.73205 31.575 31.206 31.938 -1.9073E-06 355 68 8 0 0 0 7.9646E-26 2 15485 129.29 124.4 1 1.6184 1.7887 0 57402000 22058000 35344000 15666 1231;1617 5920 6058 24407;24408 24407 HTGPNSPDTANDGFVR 16 0 1 Unmodified _HTGPNSPDTANDGFVR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2;P55795 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.8923 2 842.887332 1683.76011 67156.7 0.47301 0.00039869 0.55201 0.00046528 1.025 0.00086397 842.887858093004 847.891875512072 30.578 0.43443 30.578 30.341 30.775 0 175 36 7 0 0 0 2.5811E-09 2 14908 139.78 132.65 1 1.6635 1.8178 0 36849000 11828000 25021000 15667 1231;1617 5920 6058 24409;24410 24410 HTGPNSPDTANDGFVR 16 0 1 Unmodified _HTGPNSPDTANDGFVR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2;P55795 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.595 3 562.260647 1683.76011 80003.33 0.40457 0.00022748 0.067808 3.8125E-05 0.47238 0.0002656 562.260662540199 565.596664960905 30.564 0.65274 30.564 30.154 30.807 0 257 54 7 0 0 0 1.4762E-25 2 15020 116.86 107.34 1 1.7354 1.9974 0 74486000 29849000 44638000 15668 1231;1617 5920 6058 24411;24412 24412 HTGPNSPDTANDGFVR 16 0 1 Unmodified _HTGPNSPDTANDGFVR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2;P55795 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.5965 3 562.260647 1683.76011 80166.49 0.34014 0.00019125 -0.16481 -9.2666E-05 0.17533 9.858E-05 562.260415713158 565.596570424523 36.114 0.58381 36.114 35.824 36.408 0 262 48 8 0 0 0 9.4144E-05 2 16143 54.953 50.387 1 1.1211 0.92866 0 11182000 5282800 5899400 15669 1231;1617 5920 6058 24413;24414 24414 HTGPNSPDTANDGFVR 16 0 1 Unmodified _HTGPNSPDTANDGFVR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2;P55795 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 843.39 2 842.887332 1683.76011 66705.46 0.37487 0.00031597 -0.026934 -2.2702E-05 0.34793 0.00029327 842.887274802552 847.891585115945 36.11 0.50429 36.11 35.881 36.386 0 198 42 7 0 0 0 0.02406 1 16115 26.711 24.958 1 1.0638 0.90852 0 5734500 2388700 3345900 15670 1231;1617 5920 6058 24415 24415 HTGPNSPDTANDGFVR 16 0 1 Unmodified _HTGPNSPDTANDGFVR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2;P55795 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.9312 3 562.260647 1683.76011 80407.01 0.55296 0.00031091 -0.3046 -0.00017127 0.24836 0.00013964 562.260287755105 565.596383098057 36.109 0.51069 36.109 35.856 36.367 0 242 44 8 0 0 0 4.3994E-07 3 15625 95.582 80.895 1 1.1006 0.88907 0 11447000 5240000 6207400 15671 1231;1617 5920 6058 24416;24417;24418 24418 HTGPNSPDTANDGFVR 16 0 1 Unmodified _HTGPNSPDTANDGFVR_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2;P55795 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 842.8881 2 842.887332 1683.76011 66572.37 0.56524 0.00047643 -0.3002 -0.00025304 0.26503 0.00022339 842.886828122908 847.891361479663 36.114 0.48929 36.114 35.856 36.346 0 196 42 6 0 0 0 0.00037199 1 15646 51.875 45.491 1 1.0836 0.89906 0 5484600 2801600 2683000 15672 1231;1617 5920 6058 24419 24419 HTLNPEETSSVVR 13 0 1 Unmodified _HTLNPEETSSVVR_ 0 0 0 Q5SRE5 Q5SRE5 Q5SRE5 NUP188 Nucleoporin NUP188 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.8742 2 734.873162 1467.73177 NaN NaN NaN 0.29852 0.00021938 NaN NaN NaN NaN 35.646 0.18818 35.646 35.602 35.791 0 0 0 0 0.024959 1 18238 45.359 18.845 1 NaN NaN 0 3027700 3027700 0 15673 1816 5921 6059 24420 24420 HTLNQIDSVK 10 1 0 Unmodified _HTLNQIDSVK_ 0 0 0 CON__P12763 CON__P12763 CON__P12763 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.8121 2 577.811845 1153.60914 NaN NaN NaN -0.33416 -0.00019308 NaN NaN NaN NaN 27.754 0.35013 27.754 27.625 27.975 0 0 0 0 1.4591E-21 1 12890 145.46 86.107 1 NaN NaN 0 38085000 38085000 0 + 15674 1160 5922 6060 24421 24421 HTLNQIDSVK 10 1 0 Unmodified _HTLNQIDSVK_ 0 0 0 CON__P12763 CON__P12763 CON__P12763 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.8118 2 577.811845 1153.60914 NaN NaN NaN 0.13502 7.8018E-05 NaN NaN NaN NaN 26.789 0.34665 26.789 26.647 26.994 0 0 0 0 1.352E-64 1 12143 201.84 133.62 1 NaN NaN 0 39906000 39906000 0 + 15675 1160 5922 6060 24422 24422 HTLSIGDMVTGTVK 14 1 0 Oxidation (M) _HTLSIGDM(ox)VTGTVK_ HTLSIGDM(1)VTGTVK HTLSIGDM(93.84)VTGTVK 0 1 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8901 2 737.882141 1473.74973 NaN NaN NaN -0.43331 -0.00031973 NaN NaN NaN NaN 55.346 0.19291 55.346 55.175 55.367 3.8147E-06 0 0 0 1.691E-06 1 31043 93.839 68.622 1 NaN NaN 0 6356600 0 6356600 15676 1741 5923 6061 24423 24423 1580 HTLSIGDMVTGTVK 14 1 0 Oxidation (M) _HTLSIGDM(ox)VTGTVK_ HTLSIGDM(1)VTGTVK HTLSIGDM(47.15)VTGTVK 0 1 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8891 2 737.882141 1473.74973 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.688 1 54.688 54.188 55.188 0 0 0 0 0.0070514 1 30763 47.154 32.464 1 15677 1741 5923 6061 24424 24424 1580 HTLSIGDMVTGTVK 14 1 0 Oxidation (M) _HTLSIGDM(ox)VTGTVK_ HTLSIGDM(1)VTGTVK HTLSIGDM(60.26)VTGTVK 0 1 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.9178 2 737.882141 1473.74973 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.972 1 54.972 54.472 55.472 0 0 0 0 0.0012518 1 30915 60.255 41.987 1 15678 1741 5923 6061 24425 24425 1580 HTLSIGDMVTGTVK 14 1 0 Oxidation (M) _HTLSIGDM(ox)VTGTVK_ HTLSIGDM(1)VTGTVK HTLSIGDM(193.04)VTGTVK 0 1 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.89 2 737.882141 1473.74973 NaN NaN NaN -0.13735 -0.00010135 NaN NaN NaN NaN 53.355 0.42931 53.355 53.218 53.648 -3.8147E-06 0 0 0 7.1538E-70 1 30508 193.04 157.5 1 NaN NaN 0 5463100 0 5463100 15679 1741 5923 6061 24426 24426 1580 HTLSIGDMVTGTVK 14 1 0 Oxidation (M) _HTLSIGDM(ox)VTGTVK_ HTLSIGDM(1)VTGTVK HTLSIGDM(46.84)VTGTVK 0 1 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.8825 2 737.882141 1473.74973 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.345 1 53.345 52.845 53.845 3.8147E-06 0 0 0 0.0072235 1 30513 46.844 27.601 1 15680 1741 5923 6061 24427 24427 1580 HTLTQIK 7 1 0 Unmodified _HTLTQIK_ 0 0 0 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;B4DN39 Q59ET3 Q59ET3 CCT6A T-complex protein 1 subunit zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 424.758 2 420.750527 839.486502 94491.2 0.025207 1.0606E-05 0.15149 6.374E-05 0.1767 7.4346E-05 420.750410503843 424.757779647501 20.427 0.21169 20.427 20.322 20.534 0 32 9 5 0 0 0 0.016694 1 6873 97.798 22.689 1 2.2489 2.2875 0 13957000 4255600 9701300 15681 389 5924 6062 24428 24428 HTLVEADIGIQAER 14 0 1 Unmodified _HTLVEADIGIQAER_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.6128 3 517.942366 1550.80527 88820.8 0.25319 0.00013114 0.16548 8.5708E-05 0.41866 0.00021684 518.276200386413 521.278710678345 78.118 0.48599 78.118 77.923 78.409 0 68 30 4 0 0 0 0.025346 1 41922 18.138 18.138 1 4.1026 3.599 0 1694200 516090 1178100 15682 415 5925 6063 24429 24429 HTVDVQLPR 9 0 1 Unmodified _HTVDVQLPR_ 0 0 0 A0A1B0GUH9;A0A1P0AZG4;A0PJI9 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.8001 2 532.795998 1063.57744 84893.11 0.99377 0.00052948 -0.48961 -0.00026086 0.50417 0.00026862 532.795983059502 537.799661901836 43.241 0.41912 43.241 43.046 43.465 0 118 35 4 0 0 0 0.020683 1 23405 50.04 41.128 1 1.3063 1.3482 0 21537000 10345000 11192000 15683 630 5926 6064 24430 24430 HTVPCMPPAK 10 1 0 Oxidation (M) _HTVPCM(ox)PPAK_ HTVPCM(1)PPAK HTVPCM(87.7)PPAK 0 1 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.2783 2 577.278269 1152.54198 80309.79 0.43253 0.00024969 -0.51249 -0.00029585 -0.079956 -4.6157E-05 577.278196051379 581.284987484568 17.697 0.24583 17.697 17.594 17.84 0 29 7 6 0 0 0 0.00019128 1 4823 87.696 71.552 1 0.86554 0.9054 0 12080000 6215900 5863600 15684 1837 5927 6065 24431 24431 1692 HTVPCMPPAK 10 1 0 Oxidation (M) _HTVPCM(ox)PPAK_ HTVPCM(1)PPAK HTVPCM(63.67)PPAK 0 1 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.278 2 577.278269 1152.54198 77489.09 0.24835 0.00014337 -0.76636 -0.00044241 -0.51801 -0.00029904 577.27782957034 581.285111299286 17.592 0.40605 17.592 17.459 17.865 -1.9073E-06 64 15 7 0 0 0 0.0017559 2 4509 63.673 59.207 1 0.8965 0.92053 0 9482500 4950100 4532300 15685 1837 5927 6065 24432;24433 24433 1692 HVAAGTQQPYTDGVR 15 0 1 Unmodified _HVAAGTQQPYTDGVR_ 0 0 0 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495 A0A0S2Z487 A0A0S2Z487 JUP Junction plakoglobin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.3985 2 800.397335 1598.78012 NaN NaN NaN 0.27791 0.00022244 NaN NaN NaN NaN 26.053 0.17259 26.053 25.923 26.096 0 0 0 0 1.9633E-05 1 11557 89.189 64.397 1 NaN NaN 0 3258500 3258500 0 15686 94 5928 6066 24434 24434 HVAAGTQQPYTDGVR 15 0 1 Unmodified _HVAAGTQQPYTDGVR_ 0 0 0 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495 A0A0S2Z487 A0A0S2Z487 JUP Junction plakoglobin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.3966 2 800.397335 1598.78012 NaN NaN NaN -0.41891 -0.0003353 NaN NaN NaN NaN 25.431 0.1889 25.431 25.328 25.517 0 0 0 0 4.181E-23 1 11046 138.24 112.8 1 NaN NaN 0 9882800 9882800 0 15687 94 5928 6066 24435 24435 HVDLLEVAQETDGFSGSDLK 20 1 0 Unmodified _HVDLLEVAQETDGFSGSDLK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.3587 3 720.686691 2159.03824 73313.89 0.71313 0.00051394 0.05654 4.0748E-05 0.76967 0.00055469 721.021461600201 723.357765730589 108.26 0.55037 108.26 107.95 108.5 0 88 41 4 0 0 0 1.6857E-06 1 67614 56.081 56.081 1 2.3188 2.4016 0 12665000 4011000 8653700 15688 1920 5929 6067 24436 24436 HVDLLEVAQETDGFSGSDLK 20 1 0 Unmodified _HVDLLEVAQETDGFSGSDLK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.3603 3 720.686691 2159.03824 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.03 1 107.03 106.53 107.53 0 0 0 0 0.0004646 1 68260 58.997 53.544 1 15689 1920 5929 6067 24437 24437 HVDYVADQIVTK 12 1 0 Unmodified _HVDYVADQIVTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.3721 2 694.364441 1386.71433 72575.09 0.40384 0.00028041 -0.067935 -4.7172E-05 0.3359 0.00023324 694.364637352557 698.371398205316 52.358 1.8185 52.358 51.806 53.624 0 858 138 12 0 0 0 3.2741E-29 5 29353 166.14 153.19 1 0.76262 0.92122 0 1613600000 917480000 696140000 15690 1471 5930 6068 24438;24439;24440;24441;24442 24441 HVDYVADQIVTK 12 1 0 Unmodified _HVDYVADQIVTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.8657 2 694.364441 1386.71433 NaN NaN NaN 0.5297 0.00036781 NaN NaN NaN NaN 55.348 0.14662 55.348 55.232 55.378 0 0 0 0 0.028783 1 31110 48.004 39.779 1 NaN NaN 0 11483000 11483000 0 15691 1471 5930 6068 24443 24443 HVDYVADQIVTK 12 1 0 Unmodified _HVDYVADQIVTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.3738 2 694.364441 1386.71433 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.587 1 55.587 55.087 56.087 0 0 0 0 0.0011013 1 31251 72.006 43.607 1 15692 1471 5930 6068 24444 24444 HVDYVADQIVTK 12 1 0 Unmodified _HVDYVADQIVTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.3661 2 694.364441 1386.71433 72908.24 0.693 0.00048119 -0.2368 -0.00016442 0.4562 0.00031677 694.364592003493 698.371132997844 50.134 1.5493 50.134 49.939 51.488 0 806 130 11 0 0 0 8.0215E-104 4 28245 244.74 209.42 1 0.75443 0.89147 0 1344600000 737500000 607070000 15693 1471 5930 6068 24445;24446;24447;24448 24446 HVDYVADQIVTK 12 1 0 Unmodified _HVDYVADQIVTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.3647 2 694.364441 1386.71433 NaN NaN NaN 0.49663 0.00034484 NaN NaN NaN NaN 51.549 1.1799 51.549 51.431 52.611 0 0 0 0 3.4618E-13 1 29273 122.7 112.33 1 NaN NaN 0 22678000 22678000 0 15694 1471 5930 6068 24449 24449 HVDYVADQIVTK 12 1 0 Unmodified _HVDYVADQIVTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 698.3721 2 694.364441 1386.71433 71810.73 0.34756 0.00024133 0.031687 2.2003E-05 0.37925 0.00026333 694.364547847941 698.371432951569 59.7 3.8094 59.7 58.889 62.699 -3.8147E-06 2082 302 10 0 0 0 1.5402E-37 12 30563 176.42 163.47 1 1.2898 1.1223 0 147690000 65627000 82062000 15695 1471 5930 6068 24450;24451;24452;24453;24454;24455;24456;24457;24458;24459;24460;24461 24454 HVDYVADQIVTK 12 1 0 Unmodified _HVDYVADQIVTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 698.3727 2 694.364441 1386.71433 71728.63 0.26109 0.00018129 0.36842 0.00025582 0.62951 0.00043711 694.36438505599 698.372019749142 62.962 0.66983 62.962 62.667 63.337 0 197 60 4 0 0 0 0.0013581 3 32334 61.344 56.245 1 1.1446 0.88769 0 3497200 1660500 1836600 15696 1471 5930 6068 24462;24463;24464 24462 HVDYVADQIVTK 12 1 0 Unmodified _HVDYVADQIVTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.3716 2 694.364441 1386.71433 72042.74 0.42792 0.00029714 -0.095392 -6.6237E-05 0.33253 0.0002309 694.364491405598 698.371356228221 59.946 3.8672 59.946 59.127 62.994 0 2222 303 11 0 0 0 8.3178E-18 8 30163 141.73 132.04 1 1.2788 1.0982 0 147280000 62602000 84679000 15697 1471 5930 6068 24465;24466;24467;24468;24469;24470;24471;24472 24468 HVDYVADQIVTK 12 1 0 Unmodified _HVDYVADQIVTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.373 2 694.364441 1386.71433 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.794 1 63.794 63.294 64.294 -3.8147E-06 0 0 0 0.00679 1 32108 61.48 33.738 1 15698 1471 5930 6068 24473 24473 HVDYVVDQVVGK 12 1 0 Unmodified _HVDYVVDQVVGK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3604 2 679.359159 1356.70376 74796.91 0.61087 0.000415 0.95974 0.00065201 1.5706 0.001067 679.359710118768 683.366732899293 63.636 1.103 63.636 63.07 64.173 -3.8147E-06 420 105 5 0 0 0 2.7722E-18 1 36451 147.62 119.22 1 0.54287 0.58446 0 38240000 23537000 14703000 15699 1679 5931 6069 24474 24474 HVEFDFLIK 9 1 0 Unmodified _HVEFDFLIK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.311 2 574.310949 1146.60735 79766.8 0.79872 0.00045871 -0.22672 -0.00013021 0.572 0.0003285 574.310406640677 578.318031990897 100.62 1.9202 100.62 99.642 101.56 0 501 154 5 0 0 0 9.6685E-06 3 61876 127.56 107.78 1 0.95548 1.0403 0 49205000 22996000 26209000 15700 1792 5932 6070 24475;24476;24477 24476 HVEFDFLIK 9 1 0 Unmodified _HVEFDFLIK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.3187 2 574.310949 1146.60735 80276.94 0.77728 0.0004464 0.099782 5.7306E-05 0.87706 0.00050371 574.310949798998 578.318103384656 98.405 1.5143 98.405 97.79 99.304 0 486 129 6 0 0 0 0.00016384 2 61362 120.15 120.15 1 0.9884 1.1085 0 78412000 41659000 36752000 15701 1792 5932 6070 24478;24479 24479 HVEFDFLIK 9 1 0 Unmodified _HVEFDFLIK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 578.3184 2 574.310949 1146.60735 80584.98 0.6754 0.00038789 -0.028496 -1.6366E-05 0.64691 0.00037153 574.310880121743 578.318025278659 110.56 1.3541 110.56 110.19 111.54 0 335 63 8 0 0 0 0.0031039 3 63728 81.548 81.548 1 1.2053 0.97566 0 23353000 11574000 11779000 15702 1792 5932 6070 24480;24481;24482 24480 HVEFDFLIK 9 1 0 Unmodified _HVEFDFLIK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.3182 2 574.310949 1146.60735 80263.84 0.63019 0.00036192 -0.012868 -7.3902E-06 0.61732 0.00035453 574.310865005562 578.317972019033 110.16 1.6902 110.16 109.84 111.53 7.6294E-06 360 87 8 0 0 0 0.00053011 2 62566 113.26 113.26 1 1.1724 0.94035 0 18877000 8500000 10377000 15703 1792 5932 6070 24483;24484 24483 HVENYLK 7 1 0 Unmodified _HVENYLK_ 0 0 0 Q3LIE7;B7ZAV4;Q15392 Q3LIE7 Q3LIE7 Nbla03646;DHCR24 Delta(24)-sterol reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.7473 2 451.74016 901.465767 NaN NaN NaN -0.059349 -2.681E-05 NaN NaN NaN NaN 22.355 0.35444 22.355 22.158 22.513 0 0 0 0 0.032788 1 8379 77.923 47.31 1 NaN NaN 0 10005000 0 10005000 15704 1110 5933 6071 24485 24485 HVFDMKPK 8 2 0 Oxidation (M) _HVFDM(ox)KPK_ HVFDM(1)KPK HVFDM(77.67)KPK 0 1 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2629 2 509.262945 1016.51134 85186.99 0.13922 7.0901E-05 -0.29253 -0.00014897 -0.1533 -7.8072E-05 509.262828529253 517.277150801889 16.525 0.43293 16.525 16.315 16.748 0 90 21 6 0 0 0 0.0073441 1 3642 77.674 73.318 1 1.4632 1.6671 0 7763800 3604300 4159500 15705 1183 5934 6072 24486 24486 895 HVFFFDTK 8 1 0 Unmodified _HVFFFDTK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.7624 2 520.763635 1039.51272 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.633 1 72.633 72.133 73.133 0 0 0 0 0.00010195 1 43586 122.13 89.773 1 15706 2132 5935 6073 24487 24487 HVFFFDTK 8 1 0 Unmodified _HVFFFDTK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.7711 2 520.763635 1039.51272 84472.92 0.21416 0.00011153 0.35146 0.00018303 0.56562 0.00029455 520.763708061356 524.770855500543 82.738 0.61956 82.738 82.477 83.096 0 203 38 8 0 0 0 0.013109 2 44983 66.073 62.107 1 0.91559 0.7288 0 6696900 3785800 2911000 15707 2132 5935 6073 24488;24489 24488 HVFFFDTK 8 1 0 Unmodified _HVFFFDTK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.7637 2 520.763635 1039.51272 84710.63 0.21313 0.00011099 0.10093 5.2561E-05 0.31406 0.00016355 520.763622780503 524.77069157022 82.623 1.0344 82.623 82.279 83.313 0 250 59 7 0 0 0 0.029607 1 44222 52.482 46.276 1 0.90785 0.73773 0 4476500 2269200 2207300 15708 2132 5935 6073 24490 24490 HVFGQAVK 8 1 0 Unmodified _HVFGQAVK_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 447.2577 2 443.250695 884.486836 NaN NaN NaN 0.049936 2.2134E-05 NaN NaN NaN NaN 22.822 1.0519 22.822 22.595 23.647 0 0 0 0 0.027557 1 7063 60.76 39.213 1 NaN NaN 0 7862700 0 7862700 15709 340 5936 6074 24491 24491 HVGNQQYNVTYVVK 14 1 0 Unmodified _HVGNQQYNVTYVVK_ 0 0 0 O75369;Q68CT4;E7EN95;A0A0A0MT44 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.9346 2 824.925729 1647.8369 NaN NaN NaN 0.074079 6.1109E-05 NaN NaN NaN NaN 48.84 0.21472 48.84 48.748 48.963 0 0 0 0 0.00018167 1 27383 85.963 60.577 1 NaN NaN 0 8617300 0 8617300 15710 1402 5937 6075 24492 24492 HVIADQEVMETNR 13 0 1 Oxidation (M) _HVIADQEVM(ox)ETNR_ HVIADQEVM(1)ETNR HVIADQEVM(93.1)ETNR 0 1 0 Q9H307;A8K964;B4DTD4;B4E392 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.3738 2 779.369929 1556.72531 72847.02 0.43598 0.00033979 -0.12977 -0.00010114 0.3062 0.00023865 779.369437827155 784.373680146523 23.764 0.24727 23.764 23.57 23.818 0 25 9 5 0 0 0 4.5434E-05 1 9564 93.096 87.997 1 1.0521 1.0618 0 5869800 2947000 2922800 15711 2028 5938 6076 24493 24493 1868 HVINFDLPSDIEEYVHR 17 0 1 Unmodified _HVINFDLPSDIEEYVHR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4E132;A0A0J9YVQ7 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 695.0154 3 695.012961 2082.01705 NaN NaN NaN 0.40197 0.00027937 NaN NaN NaN NaN 121.2 0.56198 121.2 120.96 121.52 -7.6294E-06 0 0 0 0.00045664 1 72084 45.704 37.21 1 NaN NaN 0 3087100 3087100 0 15712 522 5939 6077 24494 24494 HVINFDLPSDIEEYVHR 17 0 1 Unmodified _HVINFDLPSDIEEYVHR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4E132;A0A0J9YVQ7 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 695.0139 3 695.012961 2082.01705 NaN NaN NaN 0.0020244 1.407E-06 NaN NaN NaN NaN 120.94 0.55738 120.94 120.65 121.21 0 0 0 0 0.005888 1 71074 28.869 20.375 1 NaN NaN 0 3281400 3281400 0 15713 522 5939 6077 24495 24495 HVIPVSSSDFNNK 13 1 0 Unmodified _HVIPVSSSDFNNK_ 0 0 0 A0A024R363;A0A087X0F1;Q9UK61 A0A024R363;Q9UK61 A0A024R363 C3orf63;FAM208A Protein FAM208A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.3661 2 722.364973 1442.71539 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.153 1 45.153 44.653 45.653 0 0 0 0 0.03566 1 24748 43.282 28.615 1 15714 129;2105 5940 6078 24496 24496 HVLTGSADNSCR 12 0 1 Unmodified _HVLTGSADNSCR_ 0 0 0 Q5U0F4;Q53HU7;Q13347;Q5TFK1 Q5U0F4 Q5U0F4 EIF3I Eukaryotic translation initiation factor 3 subunit I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.306 2 658.804225 1315.5939 74393.25 0.57025 0.00037568 -0.29077 -0.00019156 0.27947 0.00018412 658.804101824754 663.808590250916 16.7 0.36503 16.7 16.568 16.933 0 49 13 7 0 0 0 0.00023262 2 3959 85.377 85.377 1 1.3965 1.4561 0 13349000 5483100 7865700 15715 1711 5941 6079 24497;24498 24497 HVLTGSADNSCR 12 0 1 Unmodified _HVLTGSADNSCR_ 0 0 0 Q5U0F4;Q53HU7;Q13347;Q5TFK1 Q5U0F4 Q5U0F4 EIF3I Eukaryotic translation initiation factor 3 subunit I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.8095 2 658.804225 1315.5939 74896.76 0.35968 0.00023696 0.292 0.00019237 0.65168 0.00042933 658.804220675817 663.808520602249 17.306 0.29407 17.306 17.131 17.425 0 44 13 6 0 0 0 0.02692 1 3761 36.424 36.424 1 1.2484 1.1165 0 798130 340600 457530 15716 1711 5941 6079 24499 24499 HVLVTLGEK 9 1 0 Unmodified _HVLVTLGEK_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;F8VPF3;G3V1Y7;Q6IBG5;H0YI43;F8VZU9;F8W180;F8VXL3 F8W1R7 F8W1R7 MYL6 Myosin light polypeptide 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.3048 2 498.297842 994.581131 85661.91 0.54133 0.00026974 0.0081962 4.0841E-06 0.54953 0.00027383 498.297664781148 502.304919458351 41.641 0.80099 41.641 41.406 42.207 0 280 64 7 0 0 0 1.255E-08 2 21936 149.19 130.41 1 1.5638 1.7721 0 92132000 37552000 54581000 15717 1101 5942 6080 24500;24501 24501 HVLVTLGEK 9 1 0 Unmodified _HVLVTLGEK_ 0 0 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;F8VPF3;G3V1Y7;Q6IBG5;H0YI43;F8VZU9;F8W180;F8VXL3 F8W1R7 F8W1R7 MYL6 Myosin light polypeptide 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.2978 2 498.297842 994.581131 86515.59 -0.10107 -5.0364E-05 -0.092179 -4.5932E-05 -0.19325 -9.6296E-05 498.297748942892 502.304748414523 46.385 0.98715 46.385 46.075 47.062 0 241 63 8 0 0 0 0.034146 2 21811 44.377 33.308 1 1.7573 1.4339 0 6181000 2386800 3794100 15718 1101 5942 6080 24502;24503 24503 HVMQPYYK 8 1 0 Oxidation (M) _HVM(ox)QPYYK_ HVM(1)QPYYK HVM(81.63)QPYYK 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.2659 2 541.260402 1080.50625 NaN NaN NaN -0.9495 -0.00051393 NaN NaN NaN NaN 19.665 0.25462 19.665 19.484 19.739 0 0 0 0 0.002425 1 5970 81.635 66.965 1 NaN NaN 0 7484200 0 7484200 15719 1665 5943 6081 24504 24504 1449 HVPGGGNVQIQNK 13 1 0 Unmodified _HVPGGGNVQIQNK_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;B4DSQ1;Q8NDS5 H0Y2V1 H0Y2V1 MAP4;DKFZp547H1810 Microtubule-associated protein;Microtubule-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.3609 2 674.360025 1346.7055 75796.46 0.54665 0.00036864 -0.029608 -1.9966E-05 0.51704 0.00034867 674.359929335287 678.367040617685 22.111 0.27645 22.111 21.987 22.263 0 53 14 6 0 0 0 0.0055601 2 8253 47.187 47.187 1 1.271 1.3425 0 16307000 7226200 9080600 15720 123 5944 6082 24505;24506 24506 HVPGGGNVQIQNK 13 1 0 Unmodified _HVPGGGNVQIQNK_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;B4DSQ1;Q8NDS5 H0Y2V1 H0Y2V1 MAP4;DKFZp547H1810 Microtubule-associated protein;Microtubule-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.3674 2 674.360025 1346.7055 74583.57 0.46535 0.00031381 -0.053471 -3.6059E-05 0.41188 0.00027775 674.3601713038 678.36705262546 21.811 0.29278 21.811 21.679 21.972 0 59 13 7 0 0 0 0.00014739 2 7850 83.783 83.783 1 1.1305 1.1823 0 19335000 8781800 10553000 15721 123 5944 6082 24507;24508 24508 HVPPLTEEQLNR 12 0 1 Unmodified _HVPPLTEEQLNR_ 0 0 0 A0A024R5Q8;Q05D32;H0YMB4 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.8875 2 716.88079 1431.74703 73584.02 0.98014 0.00070264 -0.24977 -0.00017906 0.73037 0.00052359 716.880615550187 721.884761497948 45.256 0.61045 45.256 44.955 45.565 0 139 53 5 0 0 0 0.00058999 1 24297 68.735 68.735 1 1.1488 1.1632 0 17982000 8201300 9781100 15722 187 5945 6083 24509 24509 HVQGILR 7 0 1 Unmodified _HVQGILR_ 0 0 0 Q49AN9;F5H013;P62308;A8MWD9;C9JVQ0 Q49AN9 Q49AN9 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.7507 2 411.750862 821.487171 93285.02 -0.088025 -3.6244E-05 0.080702 3.3229E-05 -0.0073226 -3.0151E-06 411.750738762687 416.754865626767 24.956 0.50584 24.956 24.73 25.236 0 126 25 8 0 0 0 0.02091 2 10627 93.593 21.598 1 0.86173 0.98275 0 119830000 63399000 56435000 15723 798 5946 6084 24510;24511 24511 HVQGILR 7 0 1 Unmodified _HVQGILR_ 0 0 0 Q49AN9;F5H013;P62308;A8MWD9;C9JVQ0 Q49AN9 Q49AN9 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.7506 2 411.750862 821.487171 93998.8 -0.24209 -9.9681E-05 0.088016 3.6241E-05 -0.15407 -6.344E-05 411.750847529555 416.754932881015 23.865 0.65978 23.865 23.701 24.36 0 106 25 9 0 0 0 0.0053001 1 9683 132.01 60.01 1 0.75132 0.85574 0 106470000 50182000 56290000 15724 798 5946 6084 24512 24512 HVQLAFFPPGTVHPLER 17 0 1 Unmodified _HVQLAFFPPGTVHPLER_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.3452 3 649.01961 1944.037 75398.64 0.8596 0.00055789 -0.038555 -2.5023E-05 0.82104 0.00053287 649.019542683577 652.690025297146 108.55 1.0925 108.55 108.09 109.18 7.6294E-06 357 53 10 0 0 0 0.00288 2 62169 32.181 32.181 1 1.7137 1.3978 0 15391000 5718500 9673000 15725 1450 5947 6085 24513;24514 24513 HVQLAFFPPGTVHPLER 17 0 1 Unmodified _HVQLAFFPPGTVHPLER_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.7691 4 487.016527 1944.037 85936.05 0.38385 0.00018694 0.019583 9.5374E-06 0.40344 0.00019648 487.267208509627 489.769171728589 108.56 0.91122 108.56 108.22 109.13 0 170 43 7 0 0 0 0.051616 1 62274 23.329 21.506 1 1.7925 1.4984 0 3218700 936710 2282000 15726 1450 5947 6085 24515 24515 HVQLAFFPPGTVHPLER 17 0 1 Unmodified _HVQLAFFPPGTVHPLER_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.3557 3 649.01961 1944.037 NaN NaN NaN 0.3123 0.00020269 NaN NaN NaN NaN 108.13 1.3922 108.13 107.46 108.85 0 0 0 0 1.5817E-05 1 61062 74.428 68.648 1 NaN NaN 0 11414000 0 11414000 15727 1450 5947 6085 24516 24516 HVQLVMEAIGK 11 1 0 Oxidation (M) _HVQLVM(ox)EAIGK_ HVQLVM(1)EAIGK HVQLVM(108.9)EAIGK 0 1 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.8464 2 620.839548 1239.66454 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.85 1 47.85 47.35 48.35 0 0 0 0 5.7846E-09 1 26000 108.9 83.344 1 15728 907 5948 6086 24517 24517 733 HVQLVMEAIGK 11 1 0 Oxidation (M) _HVQLVM(ox)EAIGK_ HVQLVM(1)EAIGK HVQLVM(89.17)EAIGK 0 1 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.8468 2 620.839548 1239.66454 76097.48 0.62463 0.00038779 -0.40758 -0.00025304 0.21705 0.00013475 620.83950681148 624.846282051404 45.477 0.69267 45.477 45.085 45.777 0 129 57 5 0 0 0 0.00013754 1 24940 89.171 80.408 1 2.7694 2.999 0 22460000 6692400 15768000 15729 907 5948 6086 24518 24518 733 HVQLVMEAIGK 11 1 0 Oxidation (M) _HVQLVM(ox)EAIGK_ HVQLVM(1)EAIGK HVQLVM(81.77)EAIGK 0 1 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.84 2 620.839548 1239.66454 NaN NaN NaN 1.1765 0.00073039 NaN NaN NaN NaN 45.329 0.31913 45.329 45.148 45.467 0 0 0 0 0.00051329 1 24871 81.771 61.441 1 NaN NaN 0 3983500 3983500 0 15730 907 5948 6086 24519 24519 733 HVSPAGAAVGIPLSEDEAK 19 1 0 Unmodified _HVSPAGAAVGIPLSEDEAK_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.325 3 616.654774 1846.94249 NaN NaN NaN -0.55668 -0.00034328 NaN NaN NaN NaN 72.931 0.47467 72.931 72.611 73.086 0 0 0 0 0.0032631 1 42657 39.983 32.472 1 NaN NaN 0 5364800 0 5364800 15731 852 5949 6087 24520 24520 HVSPAGAAVGIPLSEDEAK 19 1 0 Unmodified _HVSPAGAAVGIPLSEDEAK_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.327 3 616.654774 1846.94249 76971.15 0.26608 0.00016408 0.16271 0.00010033 0.42879 0.00026442 616.989179745432 619.326199315621 71.115 0.51566 71.115 70.81 71.325 0 111 37 5 0 0 0 0.00011382 1 42506 42.716 42.716 1 3.116 3.1869 0 17404000 4591000 12813000 15732 852 5949 6087 24521 24521 HVTNPAFTK 9 1 0 Unmodified _HVTNPAFTK_ 0 0 0 Q58EY4;Q92922;Q05CR1;Q05BW5;F8WE13 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.777 2 507.771991 1013.52943 NaN NaN NaN -3.012 -0.0015294 NaN NaN NaN NaN 22.035 0.41496 22.035 21.818 22.233 0 0 0 0 0.039621 1 8182 50.372 24.635 1 NaN NaN 0 31906000 0 31906000 15733 1798 5950 6088 24522 24522 HVTNPAFTK 9 1 0 Unmodified _HVTNPAFTK_ 0 0 0 Q58EY4;Q92922;Q05CR1;Q05BW5;F8WE13 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7791 2 507.771991 1013.52943 84304.84 0.17422 8.8464E-05 0.04783 2.4287E-05 0.22205 0.00011275 507.772267749536 511.778963978768 21.359 0.34167 21.359 21.225 21.567 0 63 14 6 0 0 0 5.4386E-18 2 7520 173.75 173.75 1 0.87754 0.96735 0 43513000 22496000 21017000 15734 1798 5950 6088 24523;24524 24524 HVTNPAFTK 9 1 0 Unmodified _HVTNPAFTK_ 0 0 0 Q58EY4;Q92922;Q05CR1;Q05BW5;F8WE13 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.7792 2 507.771991 1013.52943 84708.75 0.25051 0.0001272 0.25553 0.00012975 0.50604 0.00025695 507.772060098293 511.779168925116 23.259 0.51863 23.259 23.081 23.599 1.9073E-06 100 25 6 0 0 0 0.00023093 2 7801 105.4 105.4 1 1.8741 1.469 0 3898300 1341600 2556700 15735 1798 5950 6088 24525;24526 24525 HVTNPAFTK 9 1 0 Unmodified _HVTNPAFTK_ 0 0 0 Q58EY4;Q92922;Q05CR1;Q05BW5;F8WE13 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.7792 2 507.771991 1013.52943 84399.61 0.16369 8.3115E-05 0.55646 0.00028255 0.72014 0.00036567 507.771830857698 511.778869896115 23.029 0.37227 23.029 22.838 23.21 0 86 16 8 0 0 0 0.0018554 1 7160 79.974 66.937 1 1.8573 1.5138 0 4617200 1686300 2930800 15736 1798 5950 6088 24527 24527 HVTTAEGTPGTTDQEGPPPDGPPEK 25 1 0 Unmodified _HVTTAEGTPGTTDQEGPPPDGPPEK_ 0 0 0 A0A0S2Q0B1;O14497;H0Y488;A0A1B0GTU5;Q96T01;Q96SM7;Q8NC65 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A AT-rich interactive domain-containing protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 841.7294 3 839.057623 2514.15104 70408.44 0.30235 0.00025369 -0.094609 -7.9383E-05 0.20774 0.0001743 839.391832328486 842.06351893786 41.511 0.41927 41.511 41.304 41.724 0 79 29 5 0 0 0 0.057935 1 18712 8.7274 5.9653 1 1.9833 1.678 0 1465100 545510 919600 15737 544 5951 6089 24528 24528 HVVAVVK 7 1 0 Unmodified _HVVAVVK_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 376.2448 2 376.244881 750.475209 98465.41 0.042139 1.5854E-05 0.2887 0.00010862 0.33084 0.00012448 376.244886346667 380.251996545841 21.087 0.44291 21.087 20.979 21.422 0 79 21 7 0 0 0 0.010036 2 7436 112.27 83.543 1 0.94294 1.0457 0 58972000 30423000 28549000 15738 402 5952 6090 24529;24530 24530 HVVAVVK 7 1 0 Unmodified _HVVAVVK_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 376.2448 2 376.244881 750.475209 97349.92 0.19819 7.4566E-05 -0.11389 -4.2849E-05 0.0843 3.1717E-05 376.244740564304 380.251836556576 20.507 0.48265 20.507 20.381 20.864 0 59 14 6 0 0 0 0.010036 2 6810 112.27 80.498 1 0.92914 1.0361 0 52099000 24802000 27297000 15739 402 5952 6090 24531;24532 24532 HVVAVVK 7 1 0 Unmodified _HVVAVVK_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 376.2449 2 376.244881 750.475209 97994.16 -0.19161 -7.2094E-05 0.29352 0.00011043 0.1019 3.8341E-05 376.245044749949 380.251887783427 21.946 0.64749 21.946 21.792 22.439 0 89 24 6 0 0 0 0.02172 2 6850 92.785 72.903 1 1.4022 1.1255 0 7666200 3312600 4353600 15740 402 5952 6090 24533;24534 24534 HVVAVVK 7 1 0 Unmodified _HVVAVVK_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 376.2447 2 376.244881 750.475209 97185.47 -0.3281 -0.00012345 0.27186 0.00010229 -0.056242 -2.1161E-05 376.24490881485 380.251974463437 21.59 0.64351 21.59 21.426 22.069 0 93 23 6 0 0 0 0.032572 2 6122 65.331 48.246 1 1.4077 1.1549 0 5293500 2331100 2962300 15741 402 5952 6090 24535;24536 24536 HVVFGQVIK 9 1 0 Unmodified _HVVFGQVIK_ 0 0 0 Q6FGM6;E5KN59;E5KN55;Q08752 Q6FGM6 Q6FGM6 PPID Peptidyl-prolyl cis-trans isomerase D MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.8157 2 513.808377 1025.6022 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.644 1 53.644 53.144 54.144 0 0 0 0 0.0016291 1 30044 91.626 64.664 1 15742 1206 5953 6091 24537 24537 HVVFIAQR 8 0 1 Unmodified _HVVFIAQR_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.2852 2 485.285069 968.555585 85270 0.28342 0.00013754 0.33196 0.0001611 0.61538 0.00029863 485.285114463409 490.289335032984 36.844 0.83545 36.844 36.613 37.449 -3.8147E-06 349 75 8 0 0 0 0.0029241 2 18582 98.415 86.222 1 0.88142 1.0432 0 345120000 173720000 171400000 15743 1631 5954 6092 24538;24539 24539 HVVFIAQR 8 0 1 Unmodified _HVVFIAQR_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2892 2 485.285069 968.555585 87031.18 0.55705 0.00027033 0.19784 9.6008E-05 0.75489 0.00036634 485.284958603481 490.289234181149 34.661 0.80889 34.661 34.2 35.009 0 303 64 8 0 0 0 0.0024037 1 17556 100.07 84.568 1 0.93477 1.084 0 311530000 167650000 143880000 15744 1631 5954 6092 24540 24540 HVVFIAQR 8 0 1 Unmodified _HVVFIAQR_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.285 2 485.285069 968.555585 86674.11 0.033667 1.6338E-05 0.35479 0.00017218 0.38846 0.00018851 485.28487958976 490.289426629849 40.311 2.7538 40.311 40.003 42.757 0 673 214 6 0 0 0 0.010561 2 18450 71.949 61.076 1 0.86302 0.74338 0 61316000 32112000 29204000 15745 1631 5954 6092 24541;24542 24542 HVVFIAQR 8 0 1 Unmodified _HVVFIAQR_ 0 0 0 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.2854 2 485.285069 968.555585 86289.24 0.059713 2.8978E-05 0.26811 0.00013011 0.32782 0.00015909 485.285070236947 490.289270050056 39.883 2.5231 39.883 39.505 42.028 0 670 203 8 0 0 0 0.007358 2 17678 83.287 72.414 1 0.8856 0.77248 0 37924000 20165000 17759000 15746 1631 5954 6092 24543;24544 24544 HVVLPVDDDSDLNVVASFDR 20 0 1 Unmodified _HVVLPVDDDSDLNVVASFDR_ 0 0 0 A0A024R9B5;B4DMM7;Q15291;B4DLF8 A0A024R9B5 A0A024R9B5 RBBP5 Retinoblastoma-binding protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.035 3 738.034202 2211.08078 70703.53 0.87429 0.00064525 -1.2294 -0.00090733 -0.3551 -0.00026208 738.367791423909 741.368220001515 112.65 0.4836 112.65 112.38 112.86 7.6294E-06 137 35 6 0 0 0 2.9089E-05 1 71099 44.238 41.841 1 0.93882 0.9626 0 14401000 7296200 7105100 15747 272 5955 6093 24545 24545 HVVLPVDDDSDLNVVASFDR 20 0 1 Unmodified _HVVLPVDDDSDLNVVASFDR_ 0 0 0 A0A024R9B5;B4DMM7;Q15291;B4DLF8 A0A024R9B5 A0A024R9B5 RBBP5 Retinoblastoma-binding protein 5 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.3705 3 738.034202 2211.08078 71502.06 0.94983 0.000701 -1.0203 -0.00075301 -0.070469 -5.2009E-05 738.36816497247 741.703710891666 123.09 0.63654 123.09 122.85 123.48 7.6294E-06 98 28 5 0 0 0 0.033036 1 73643 23.172 23.172 1 1.2379 1.0464 0 2982700 1362500 1620200 15748 272 5955 6093 24546 24546 HVVPNEVVVQR 11 0 1 Unmodified _HVVPNEVVVQR_ 0 0 0 Q5T0I0;B7Z4U6;B7Z992;A0A0A0MS51;B7Z9A0;B7Z6N2;A0A0A0MT01;CON__Q3SX14;P06396;Q5T0I1;A0A0U1RQL8;B7Z2X4;Q69YR8 Q5T0I0 Q5T0I0 GSN;DKFZp313L0718 Gelsolin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.3629 2 638.362036 1274.70952 NaN NaN NaN -0.30611 -0.00019541 NaN NaN NaN NaN 38.947 0.4271 38.947 38.78 39.207 0 0 0 0 0.032809 1 20022 49.418 19.608 1 NaN NaN 0 13487000 13487000 0 + 15749 474 5956 6094 24547 24547 HWGGNVLGPK 10 1 0 Unmodified _HWGGNVLGPK_ 0 0 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.787 2 532.785433 1063.55631 82685.73 0.47063 0.00025075 0.010344 5.5111E-06 0.48097 0.00025626 532.785458034385 536.792459412963 37.176 1.1041 37.176 36.913 38.017 0 396 89 8 0 0 0 1.1859E-05 2 19175 103.83 103.83 1 0.70242 0.81646 0 232990000 128990000 104000000 15750 1648 5957 6095 24548;24549 24548 HWGGNVLGPK 10 1 0 Unmodified _HWGGNVLGPK_ 0 0 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.7855 2 532.785433 1063.55631 82491.01 0.46112 0.00024568 -0.077624 -4.1357E-05 0.3835 0.00020432 532.785363937728 536.792528196195 43.769 1.6173 43.769 43.497 45.114 0 551 116 7 0 0 0 0.00083665 2 20646 80.438 80.438 1 0.85049 0.68853 0 23491000 11957000 11534000 15751 1648 5957 6095 24550;24551 24551 HWGGNVLGPK 10 1 0 Unmodified _HWGGNVLGPK_ 0 0 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.7926 2 532.785433 1063.55631 81268.35 0.33798 0.00018007 -0.16265 -8.6659E-05 0.17533 9.3411E-05 532.785255623194 536.792369435058 43.392 2.2144 43.392 42.914 45.128 0 676 148 7 0 0 0 0.027594 1 19751 43.769 43.769 1 0.77605 0.63212 0 25587000 14898000 10690000 15752 1648 5957 6095 24552 24552 HWMLDK 6 1 0 Oxidation (M) _HWM(ox)LDK_ HWM(1)LDK HWM(88.73)LDK 0 1 0 B2R491;P62701;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.2094 2 423.202356 844.390159 94407.05 -0.13555 -5.7365E-05 0.17629 7.4604E-05 0.040736 1.7239E-05 423.202337712289 427.209358874874 25.32 0.45884 25.32 25.106 25.565 0 72 17 7 0 0 0 0.031246 1 10929 88.734 67.188 1 1.2978 1.4356 0 45247000 19293000 25954000 15753 824 5958 6096 24553 24553 653 HWMLDK 6 1 0 Oxidation (M) _HWM(ox)LDK_ HWM(1)LDK HWM(50.54)LDK 0 1 0 B2R491;P62701;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 423.2023 2 423.202356 844.390159 93508.66 -0.73887 -0.00031269 0.74932 0.00031711 0.010455 4.4247E-06 423.202655089983 427.209552077238 28.173 0.40952 28.173 28.019 28.429 -1.9073E-06 62 17 5 0 0 0 0.050143 1 10643 50.539 33.455 1 0.67759 0.5352 0 3925800 2198400 1727500 15754 824 5958 6096 24554 24554 653 HYVYGPLPQSFDK 13 1 0 Unmodified _HYVYGPLPQSFDK_ 0 0 0 P13073;H3BPG0 P13073 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.8939 2 775.885541 1549.75653 70818.55 0.5201 0.00040354 0.066231 5.1387E-05 0.58633 0.00045493 775.885151220736 779.892980094517 71.155 0.54034 71.155 70.799 71.34 0 150 39 7 0 0 0 0.00014673 5 42592 102.06 99.548 1 1.0006 1.0431 0 19123000 9682800 9439900 15755 1477 5959 6097 24555;24556;24557;24558;24559 24559 HYVYGPLPQSFDK 13 1 0 Unmodified _HYVYGPLPQSFDK_ 0 0 0 P13073;H3BPG0 P13073 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 779.8914 2 775.885541 1549.75653 69188.19 0.54642 0.00042396 -0.56689 -0.00043984 -0.020462 -1.5876E-05 775.885661373898 779.89173196753 82.49 1.033 82.49 82.112 83.145 0 200 60 6 0 0 0 0.0044268 2 44005 63.073 59.31 1 1.3253 1.0743 0 2749200 1069100 1680000 15756 1477 5959 6097 24560;24561 24560 IAADILIK 8 1 0 Unmodified _IAADILIK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.7869 2 428.778754 855.542954 92843.66 0.018311 7.8512E-06 0.26342 0.00011295 0.28174 0.0001208 428.778707091819 432.785873728296 79.072 0.9173 79.072 78.709 79.626 0 340 82 6 0 0 0 0.029143 1 46732 52.786 26.614 1 1.025 1.1584 0 105600000 50385000 55219000 15757 897 5960 6098 24562 24562 IAADILIK 8 1 0 Unmodified _IAADILIK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 432.7858 2 428.778754 855.542954 92185.52 -0.043107 -1.8483E-05 0.23632 0.00010133 0.19321 8.2844E-05 428.778772161824 432.785815870257 77.949 0.86175 77.949 77.528 78.39 0 335 73 6 0 0 0 0.0092533 2 47005 75.109 40.083 1 0.96621 1.0834 0 79044000 41198000 37846000 15758 897 5960 6098 24563;24564 24563 IAADILIK 8 1 0 Unmodified _IAADILIK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 432.786 2 428.778754 855.542954 92502.3 -0.29504 -0.00012651 0.38497 0.00016507 0.08993 3.856E-05 428.778820674205 432.78590137669 90.003 0.89371 90.003 89.616 90.51 0 245 61 5 0 0 0 0.041092 1 49694 46.994 20.822 1 1.3394 1.0486 0 11664000 4661300 7002300 15759 897 5960 6098 24565 24565 IAADILIK 8 1 0 Unmodified _IAADILIK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 432.7856 2 428.778754 855.542954 92463.52 -0.46671 -0.00020012 0.53637 0.00022998 0.069658 2.9868E-05 428.778906273372 432.785951583779 89.838 0.83714 89.838 89.517 90.354 0 224 56 5 0 0 0 0.011179 1 48914 70.525 32.364 1 1.2815 1.0529 0 9609400 4417100 5192300 15760 897 5960 6098 24566 24566 IAALQAFADQLIAAGHYAK 19 1 0 Unmodified _IAALQAFADQLIAAGHYAK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.0336 3 658.026542 1971.0578 75953.36 1.1186 0.00073606 0.044496 2.928E-05 1.1631 0.00076534 658.360752853815 660.698061657453 123.17 0.56223 123.17 122.9 123.46 0 253 44 8 0 0 0 2.0052E-06 1 79736 78.234 78.234 1 1.5468 1.5986 0 17210000 6174100 11036000 15761 523 5961 6099 24567 24567 IAALQAFADQLIAAGHYAK 19 1 0 Unmodified _IAALQAFADQLIAAGHYAK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.6981 3 658.026542 1971.0578 75243.32 0.86643 0.00057013 -0.12784 -8.4121E-05 0.73859 0.00048601 658.360751319115 661.032228950941 122.57 0.58839 122.57 122.28 122.87 0 255 47 8 0 0 0 8.5263E-06 1 81145 57.525 57.525 1 1.6547 1.7918 0 22084000 8700800 13384000 15762 523 5961 6099 24568 24568 IAALQAFADQLIAAGHYAK 19 1 0 Unmodified _IAALQAFADQLIAAGHYAK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.6983 3 658.026542 1971.0578 NaN NaN NaN -0.043679 -2.8742E-05 NaN NaN NaN NaN 134.49 0.14786 134.49 134.41 134.56 0 0 0 0 0.00019006 1 82169 54.368 44.838 1 NaN NaN 0 11003000 0 11003000 15763 523 5961 6099 24569 24569 IAAPFR 6 0 1 Unmodified _IAAPFR_ 0 0 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 337.7031 2 337.702849 673.391145 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.071 1 42.071 41.571 42.571 -3.8147E-06 0 0 0 0.040268 1 22657 89.775 11.773 1 15764 1833 5962 6100 24570 24570 IAATGVVLDLDK 12 1 0 Unmodified _IAATGVVLDLDK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.9995 2 607.853178 1213.6918 78019.13 0.73246 0.00044523 -0.071566 -4.3502E-05 0.66089 0.00040173 607.853172145607 611.860193591611 92.866 0.88441 92.866 92.481 93.365 0 394 78 6 0 0 0 3.7767E-09 1 56386 112.13 87.975 1 1.0091 1.1416 0 86614000 43628000 42986000 15765 1742 5963 6101 24571 24571 IAATGVVLDLDK 12 1 0 Unmodified _IAATGVVLDLDK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.8606 2 607.853178 1213.6918 78347.2 0.78651 0.00047808 0.025245 1.5345E-05 0.81175 0.00049343 607.853200842439 611.860157227888 91.939 0.82962 91.939 91.609 92.438 0 367 72 7 0 0 0 1.8025E-22 2 56882 150.94 150.94 1 0.96544 1.0791 0 98898000 50502000 48396000 15766 1742 5963 6101 24572;24573 24573 IAATGVVLDLDK 12 1 0 Unmodified _IAATGVVLDLDK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.853 2 607.853178 1213.6918 77971.34 0.54333 0.00033027 0.046578 2.8313E-05 0.58991 0.00035858 607.85309170671 611.860279765404 106.2 0.72244 106.2 105.92 106.65 7.6294E-06 225 36 8 0 0 0 0.00014324 2 60706 93.258 84.658 1 1.4752 1.1607 0 17352000 7218500 10133000 15767 1742 5963 6101 24574;24575 24575 IAATGVVLDLDK 12 1 0 Unmodified _IAATGVVLDLDK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.8531 2 607.853178 1213.6918 78049.5 0.55408 0.0003368 -0.0057838 -3.5157E-06 0.5483 0.00033328 607.853126609291 611.860220915185 106 0.81033 106 105.73 106.54 -7.6294E-06 241 48 7 0 0 0 0.00024208 2 59660 87.298 63.143 1 1.4823 1.1902 0 14527000 6022300 8504600 15768 1742 5963 6101 24576;24577 24577 IAAYLQSDQFCK 12 1 0 Unmodified _IAAYLQSDQFCK_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;B4E2J2 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.3584 2 722.350477 1442.6864 70530.1 0.40627 0.00029347 0.28468 0.00020564 0.69094 0.0004991 722.350823541292 726.357930805136 69.828 0.93852 69.828 69.522 70.46 0 298 82 6 0 0 0 1.6063E-22 2 40521 152.28 152.28 1 3.0632 3.0169 0 24259000 5833100 18426000 15769 1503 5964 6102 24578;24579 24578 IAAYLQSDQFCK 12 1 0 Unmodified _IAAYLQSDQFCK_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;B4E2J2 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.3596 2 722.350477 1442.6864 70891.74 0.64037 0.00046257 0.18467 0.00013339 0.82504 0.00059597 722.351061707575 726.357980753716 68.875 0.95269 68.875 68.318 69.271 0 274 80 6 0 0 0 1.6063E-22 1 40728 152.28 152.28 1 2.7599 2.9687 0 37647000 9338300 28308000 15770 1503 5964 6102 24580 24580 IAAYLQSDQFCK 12 1 0 Unmodified _IAAYLQSDQFCK_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;B4E2J2 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.3505 2 722.350477 1442.6864 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.656 1 68.656 68.156 69.156 0 0 0 0 0.0062561 1 40814 62.303 34.974 1 15771 1503 5964 6102 24581 24581 IAAYLQSDQFCK 12 1 0 Unmodified _IAAYLQSDQFCK_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;B4E2J2 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.3586 2 722.350477 1442.6864 70343.32 0.54619 0.00039454 0.19087 0.00013788 0.73706 0.00053242 722.350328245533 726.357982610355 80.148 0.54897 80.148 79.809 80.358 0 159 33 7 0 0 0 0.00474 2 43145 52.725 52.725 1 1.8656 1.475 0 5129800 1832500 3297300 15772 1503 5964 6102 24582;24583 24582 IAAYLQSDQFCK 12 1 0 Unmodified _IAAYLQSDQFCK_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;B4E2J2 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.8528 2 722.350477 1442.6864 70100.9 0.61567 0.00044473 -0.15075 -0.0001089 0.46491 0.00033583 722.350318607756 726.357871559609 80.352 0.56671 80.352 80.044 80.61 0 144 33 8 0 0 0 2.5204E-08 2 42537 119.68 119.68 1 1.8019 1.4775 0 5075000 1982900 3092100 15773 1503 5964 6102 24584;24585 24585 IACEEEFSDSEEEGEGGR 18 0 1 Unmodified _IACEEEFSDSEEEGEGGR_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5HYD4 Q6IT96 Q6IT96 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1020.4055 2 1015.40001 2028.78546 NaN NaN NaN 0.031351 3.1834E-05 NaN NaN NaN NaN 44.188 0.26937 44.188 44.098 44.367 0 0 0 0 2.065E-09 2 24088 88.087 74.199 1 NaN NaN 0 3975700 0 3975700 15774 1715 5965 6103 24586;24587 24586 IADFGWSVHAPSLR 14 0 1 Unmodified _IADFGWSVHAPSLR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3QLN8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.6086 3 519.272047 1554.79431 83794.48 0.66854 0.00034716 -0.11213 -5.8228E-05 0.55641 0.00028893 519.271987104805 522.607966260223 96.678 1.2022 96.678 96.244 97.447 0 525 105 8 0 0 0 7.1644E-05 1 58742 64.675 51.262 1 0.9174 1.0596 0 158410000 82644000 75769000 15775 881;1967 5966 6104 24588 24588 IADFGWSVHAPSLR 14 0 1 Unmodified _IADFGWSVHAPSLR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3QLN8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.272 3 519.272047 1554.79431 83425.3 0.89302 0.00046372 -0.32239 -0.00016741 0.57063 0.00029631 519.271837930345 522.607941729135 95.498 1.0734 95.498 95.108 96.182 0 554 89 8 0 0 0 3.5019E-05 2 59252 82.908 76.826 1 0.88985 1.0163 0 149010000 77639000 71370000 15776 881;1967 5966 6104 24589;24590 24589 IADFGWSVHAPSLR 14 0 1 Unmodified _IADFGWSVHAPSLR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3QLN8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.4037 2 778.404432 1554.79431 70108.68 1.1621 0.00090459 0.17079 0.00013295 1.3329 0.0010375 778.905816509594 783.408703402837 95.507 0.65898 95.507 95.242 95.901 0 149 54 5 0 0 0 0.0035023 2 59386 41.684 41.684 1 1.0493 1.0514 0 18346000 9312300 9034100 15777 881;1967 5966 6104 24591;24592 24592 IADFGWSVHAPSLR 14 0 1 Unmodified _IADFGWSVHAPSLR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3QLN8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.6085 3 519.272047 1554.79431 82942.82 0.45864 0.00023816 -0.14471 -7.5144E-05 0.31393 0.00016302 519.271940558993 522.608049995422 108.9 1.0447 108.9 108.6 109.64 0 256 50 10 0 0 0 5.6466E-05 1 62576 71.692 52.634 1 1.8023 1.5501 0 47872000 15326000 32546000 15778 881;1967 5966 6104 24593 24593 IADFGWSVHAPSLR 14 0 1 Unmodified _IADFGWSVHAPSLR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3QLN8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.6083 3 519.272047 1554.79431 84325.61 0.35399 0.00018382 -0.10568 -5.4876E-05 0.24831 0.00012894 519.271990036646 522.608006758243 108.72 0.98525 108.72 108.42 109.4 0 269 47 10 0 0 0 5.6466E-05 1 61533 71.692 44.722 1 2.2261 1.9421 0 50592000 16194000 34398000 15779 881;1967 5966 6104 24594 24594 IADFGWSVHAPSLR 14 0 1 Unmodified _IADFGWSVHAPSLR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3QLN8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.9111 2 778.404432 1554.79431 69114.87 0.6454 0.00050238 0.78038 0.00060745 1.4258 0.0011098 778.906363099344 783.408755034526 108.7 0.51446 108.7 108.42 108.93 0 114 26 7 0 0 0 0.00024893 1 61539 66.498 47.752 1 2.2982 1.9156 0 6790900 2410100 4380700 15780 881;1967 5966 6104 24595 24595 IADFGWSVHAPSSR 14 0 1 Unmodified _IADFGWSVHAPSSR_ 0 0 0 O14965;B4DX16;A3KFJ0 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.5881 3 510.588035 1528.74228 87214.28 0.33849 0.00017283 -0.046678 -2.3833E-05 0.29181 0.00014899 510.588019774715 513.924066787046 75.398 0.46561 75.398 75.19 75.656 0 166 42 6 0 0 0 0.00019041 1 45423 48.112 48.112 1 0.97146 0.95632 0 14497000 6937000 7559800 15781 1369 5967 6105 24596 24596 IADFGWSVHAPSSR 14 0 1 Unmodified _IADFGWSVHAPSSR_ 0 0 0 O14965;B4DX16;A3KFJ0 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.9245 3 510.588035 1528.74228 86609.55 0.3631 0.00018539 0.029139 1.4878E-05 0.39224 0.00020027 510.587968105266 513.92411879989 87.434 0.47406 87.434 87.23 87.704 0 117 27 6 0 0 0 0.0015768 1 48110 34.302 34.302 1 1.1294 0.97705 0 2609800 1371700 1238100 15782 1369 5967 6105 24597 24597 IADFGWSVHAPSSR 14 0 1 Unmodified _IADFGWSVHAPSSR_ 0 0 0 O14965;B4DX16;A3KFJ0 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.9238 3 510.588035 1528.74228 86432.78 0.38451 0.00019633 0.31825 0.00016249 0.70276 0.00035882 510.587971233807 513.924134860645 87.412 0.43262 87.412 87.213 87.645 0 115 24 7 0 0 0 0.0036105 1 47252 28.956 28.956 1 1.1877 1.0637 0 2293500 1014900 1278500 15783 1369 5967 6105 24598 24598 IADGYEQAAR 10 0 1 Unmodified _IADGYEQAAR_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;B4DX08 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.2714 2 547.26727 1092.51999 85629.73 0.46431 0.0002541 0.42144 0.00023064 0.88576 0.00048475 547.266729132929 552.271533807537 25.146 0.29581 25.146 24.978 25.274 -1.9073E-06 34 13 5 0 0 0 1.4773E-05 1 10784 101.65 53.363 1 4.2268 4.3827 0 13690000 4070800 9619200 15784 960 5968 6106 24599 24599 IADGYEQAAR 10 0 1 Unmodified _IADGYEQAAR_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;B4DX08 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.272 2 547.26727 1092.51999 NaN NaN NaN 0.29118 0.00015936 NaN NaN NaN NaN 28.251 0.27748 28.251 28.084 28.361 0 0 0 0 0.032142 1 11260 51.445 24.191 1 NaN NaN 0 1127400 0 1127400 15785 960 5968 6106 24600 24600 IADQFLGAMYTLPR 14 0 1 Oxidation (M) _IADQFLGAM(ox)YTLPR_ IADQFLGAM(1)YTLPR IADQFLGAM(46.84)YTLPR 0 1 0 A8K2R3;O60341;R4GMP9 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.412 2 806.413608 1610.81266 68474.5 0.7917 0.00063844 -0.57212 -0.00046137 0.21958 0.00017707 806.914972868776 811.417126105295 103.83 0.37676 103.83 103.55 103.93 -7.6294E-06 86 29 6 0 0 0 0.0017523 2 64025 46.844 28.438 1 1.039 1.0634 0 6628200 3316500 3311700 15786 711 5969 6107 24601;24602 24601 547 IADQLEELNK 10 1 0 Unmodified _IADQLEELNK_ 0 0 0 A0A0S2Z3K4;J3QTA2;Q99933;A0A0U1RR89;C9JYK5 A0A0S2Z3K4 A0A0S2Z3K4 BAG1 BAG family molecular chaperone regulator 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8184 2 586.81151 1171.60847 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.02 1 58.02 57.52 58.52 0 0 0 0 1.0303E-05 1 32862 98.033 45.317 1 15787 551 5970 6108 24603 24603 IADQLEELNK 10 1 0 Unmodified _IADQLEELNK_ 0 0 0 A0A0S2Z3K4;J3QTA2;Q99933;A0A0U1RR89;C9JYK5 A0A0S2Z3K4 A0A0S2Z3K4 BAG1 BAG family molecular chaperone regulator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8189 2 586.81151 1171.60847 78947.08 0.51448 0.0003019 -0.53207 -0.00031222 -0.017589 -1.0321E-05 586.811495860127 590.818520168031 57.079 0.66895 57.079 56.763 57.432 3.8147E-06 147 50 4 0 0 0 1.2036E-05 1 33034 103.7 103.7 1 0.41906 0.41872 0 15212000 10329000 4883300 15788 551 5970 6108 24604 24604 IADQLEELNK 10 1 0 Unmodified _IADQLEELNK_ 0 0 0 A0A0S2Z3K4;J3QTA2;Q99933;A0A0U1RR89;C9JYK5 A0A0S2Z3K4 A0A0S2Z3K4 BAG1 BAG family molecular chaperone regulator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.8184 2 586.81151 1171.60847 78582.45 0.41884 0.00024578 -0.32493 -0.00019068 0.093909 5.5107E-05 586.811631240829 590.818373524005 67.866 0.58041 67.866 67.569 68.15 0 134 42 4 0 0 0 0.0088882 1 34576 55.461 55.461 1 1.0911 0.85904 0 2283700 936220 1347500 15789 551 5970 6108 24605 24605 IAEEFEVELER 11 0 1 Unmodified _IAEEFEVELER_ 0 0 0 A0A024R5C5;P11498;E9PS68 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.3449 2 682.340632 1362.66671 75613.04 0.76834 0.00052427 0.02286 1.5598E-05 0.7912 0.00053987 682.842386473796 687.344594186164 88.874 0.3177 88.874 88.675 88.992 0 67 26 4 0 0 0 0.00022191 2 54840 91.855 46.785 1 1.1939 1.1975 0 17671000 10423000 7248600 15790 176 5971 6109 24606;24607 24607 IAEESNFPFIK 11 1 0 Unmodified _IAEESNFPFIK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3;Q96D47;D3DXJ4 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8461 2 647.837528 1293.6605 78797.66 1.1068 0.00071703 -1.2343 -0.00079963 -0.12749 -8.2595E-05 648.338491862752 651.843633669192 95.866 0.63374 95.866 95.652 96.286 0 161 56 5 0 0 0 0.00034577 1 58399 85.731 85.731 1 1.8754 1.9423 0 14747000 5171900 9575500 15791 1096 5972 6110 24608 24608 IAEFAFEYAR 10 0 1 Unmodified _IAEFAFEYAR_ 0 0 0 H0YMU3;B4DJB4;H0YL72;B4DSY4;Q53GF8;P50213;B7Z9J8 H0YMU3 H0YMU3 IDH3A Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.8078 2 608.803488 1215.59242 78379.81 0.72006 0.00043837 -0.04129 -2.5138E-05 0.67877 0.00041323 608.803568606258 613.807584964294 91.494 0.54993 91.494 91.208 91.757 0 181 42 7 0 0 0 0.00034741 1 55295 89.247 33.786 1 1.8655 2.0171 0 48926000 17712000 31214000 15792 987 5973 6111 24609 24609 IAEFAFEYAR 10 0 1 Unmodified _IAEFAFEYAR_ 0 0 0 H0YMU3;B4DJB4;H0YL72;B4DSY4;Q53GF8;P50213;B7Z9J8 H0YMU3 H0YMU3 IDH3A Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.8082 2 608.803488 1215.59242 NaN NaN NaN -0.58991 -0.00035914 NaN NaN NaN NaN 90.538 0.5868 90.538 90.254 90.841 -7.6294E-06 0 0 0 5.0688E-05 1 55913 101.11 47.354 1 NaN NaN 0 29766000 0 29766000 15793 987 5973 6111 24610 24610 IAEFAFEYAR 10 0 1 Unmodified _IAEFAFEYAR_ 0 0 0 H0YMU3;B4DJB4;H0YL72;B4DSY4;Q53GF8;P50213;B7Z9J8 H0YMU3 H0YMU3 IDH3A Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.3091 2 608.803488 1215.59242 80160.66 0.47523 0.00028932 0.41073 0.00025005 0.88596 0.00053937 609.305749504895 613.807729575719 104.26 0.64763 104.26 104.04 104.69 0 115 41 4 0 0 0 0.009516 2 59422 54.608 26.595 1 1.1365 1.0032 0 1609100 1005900 603120 15794 987 5973 6111 24611;24612 24612 IAEFTTNLTEEEEK 14 1 0 Unmodified _IAEFTTNLTEEEEK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.4037 2 827.396332 1652.77811 67598.92 0.76907 0.00063632 0.24951 0.00020644 1.0186 0.00084277 827.396549812647 831.403481610557 75.875 0.9184 75.875 75.523 76.442 0 452 77 10 0 0 0 1.3095E-46 2 44530 181.49 181.49 1 1.6537 1.9003 0 202140000 73006000 129140000 15795 81 5974 6112 24613;24614 24613 IAEFTTNLTEEEEK 14 1 0 Unmodified _IAEFTTNLTEEEEK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.4041 2 827.396332 1652.77811 67255.55 0.56866 0.00047051 0.21387 0.00017696 0.78253 0.00064746 827.396589226315 831.403433583657 74.855 0.79839 74.855 74.523 75.321 0 513 71 10 0 0 0 1.7855E-46 2 44955 178.95 178.95 1 1.7296 2.0067 0 220680000 81500000 139180000 15796 81 5974 6112 24615;24616 24616 IAEFTTNLTEEEEK 14 1 0 Unmodified _IAEFTTNLTEEEEK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.8995 2 827.396332 1652.77811 67119.3 0.62344 0.00051583 0.44415 0.00036748 1.0676 0.00088332 827.39669874222 831.403654119041 86.899 1.5451 86.899 86.362 87.907 0 424 92 10 0 0 0 7.4152E-05 2 47597 89.403 83.171 1 2.5642 2.1241 0 44624000 11831000 32792000 15797 81 5974 6112 24617;24618 24617 IAEFTTNLTEEEEK 14 1 0 Unmodified _IAEFTTNLTEEEEK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.4047 2 827.396332 1652.77811 67524.09 0.67891 0.00056173 0.42486 0.00035153 1.1038 0.00091326 827.396721240498 831.403609103427 87.093 1.7035 87.093 86.5 88.203 0 444 104 9 0 0 0 8.4295E-12 3 46925 125.28 125.28 1 2.693 2.2473 0 42142000 10986000 31156000 15798 81 5974 6112 24619;24620;24621 24620 IAEGVNSLLQMAGLLAR 17 0 1 Oxidation (M) _IAEGVNSLLQM(ox)AGLLAR_ IAEGVNSLLQM(1)AGLLAR IAEGVNSLLQM(77.59)AGLLAR 0 1 0 Q75MT5;B5BUD2;P35250;A0A087WVY3 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 891.4969 2 886.490378 1770.9662 NaN NaN NaN -0.11235 -9.9595E-05 NaN NaN NaN NaN 123.91 0.40685 123.91 123.65 124.06 7.6294E-06 0 0 0 7.961E-06 1 82359 77.593 66.688 1 NaN NaN 0 3343300 0 3343300 15799 1079 5975 6113 24622 24622 831 IAELSEDDQK 10 1 0 Unmodified _IAELSEDDQK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.2776 2 574.2775 1146.54045 80174.53 0.56977 0.0003272 0.21162 0.00012153 0.78139 0.00044873 574.277483775534 578.284627596804 27.167 0.47481 27.167 26.926 27.401 0 117 23 6 0 0 0 1.768E-13 2 12398 150.36 129.39 1 1.1976 1.334 0 51564000 21328000 30236000 15800 1183 5976 6114 24623;24624 24624 IAELSEDDQK 10 1 0 Unmodified _IAELSEDDQK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.2777 2 574.2775 1146.54045 80128.56 0.33966 0.00019506 0.098787 5.6731E-05 0.43845 0.00025179 574.277244592941 578.284722644691 31.116 0.54171 31.116 30.846 31.388 0 143 32 6 0 0 0 0.0067028 2 13022 58.433 54.066 1 1.69 1.3518 0 8797000 3143800 5653200 15801 1183 5976 6114 24625;24626 24626 IAELSEDDQK 10 1 0 Unmodified _IAELSEDDQK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.2847 2 574.2775 1146.54045 NaN NaN NaN 0.17922 0.00010292 NaN NaN NaN NaN 31.196 0.59254 31.196 30.951 31.543 0 0 0 0 0.017622 1 12587 55.461 21.209 1 NaN NaN 0 4304600 0 4304600 15802 1183 5976 6114 24627 24627 IAEMEYSGANSIFLR 15 0 1 Oxidation (M) _IAEM(ox)EYSGANSIFLR_ IAEM(1)EYSGANSIFLR IAEM(106.67)EYSGANSIFLR 0 1 0 Q13895 Q13895 Q13895 BYSL Bystin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.9224 2 858.916712 1715.81887 NaN NaN NaN -0.55758 -0.00047891 NaN NaN NaN NaN 90.193 0.43687 90.193 89.986 90.423 -7.6294E-06 0 0 0 9.8589E-12 1 54390 106.67 92.248 1 NaN NaN 0 10918000 0 10918000 15803 1724 5977 6115 24628 24628 1561 IAEMEYSGANSIFLR 15 0 1 Oxidation (M) _IAEM(ox)EYSGANSIFLR_ IAEM(1)EYSGANSIFLR IAEM(87.67)EYSGANSIFLR 0 1 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 859.4177 2 858.916712 1715.81887 65085.32 0.51556 0.00044282 1.1562 0.00099306 1.6717 0.0014359 859.418866307991 863.920744764849 89.259 0.43091 89.259 89.014 89.445 0 140 34 6 0 0 0 8.2735E-06 2 55076 87.667 81.944 1 1.5557 1.6698 0 25405000 9960100 15445000 15804 1724 5977 6115 24629;24630 24630 1561 IAEPSVCGR 9 0 1 Unmodified _IAEPSVCGR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.7513 2 494.747659 987.480765 NaN NaN NaN 0.13716 6.7858E-05 NaN NaN NaN NaN 30.797 0.51739 30.797 30.531 31.049 0 0 0 0 0.020834 2 15162 58.23 26.941 1 NaN NaN 0 5684200 0 5684200 15805 235 5978 6116 24631;24632 24632 IAEPSVCGR 9 0 1 Unmodified _IAEPSVCGR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7484 2 494.747659 987.480765 85003.25 -0.067571 -3.3431E-05 -0.37778 -0.00018691 -0.44535 -0.00022034 494.747798672545 499.751962532061 30.261 0.42015 30.261 30.068 30.488 0 134 34 8 0 0 0 0.013178 2 14799 56.81 38.775 1 1.2913 1.2821 0 16105000 5679200 10426000 15806 235 5978 6116 24633;24634 24634 IAFAITAIK 9 1 0 Unmodified _IAFAITAIK_ 0 0 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.2996 2 474.299853 946.585153 87364.13 0.33942 0.00016099 0.32481 0.00015406 0.66422 0.00031504 474.299833784453 478.307072662903 97.471 1.2871 97.471 97.005 98.292 7.6294E-06 594 110 8 0 0 0 0.0017345 3 59888 81.548 58.619 1 1.152 1.3606 0 376660000 177260000 199400000 15807 1639 5979 6117 24635;24636;24637 24637 IAFAITAIK 9 1 0 Unmodified _IAFAITAIK_ 0 0 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.3001 2 474.299853 946.585153 88165.28 0.36959 0.0001753 0.067784 3.215E-05 0.43738 0.00020745 474.299716463106 478.30698198842 96.7 2.088 96.7 96.015 98.103 0 636 173 7 0 0 0 0.0017345 3 60066 81.548 58.239 1 1.1841 1.3938 0 419240000 196420000 222820000 15808 1639 5979 6117 24638;24639;24640 24638 IAFAITAIK 9 1 0 Unmodified _IAFAITAIK_ 0 0 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 P62269 RPS18 40S ribosomal protein S18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 955.6068 1 947.59243 946.585153 NaN NaN NaN -0.29968 -0.00028397 NaN NaN NaN NaN 96.836 0.54823 96.836 96.432 96.98 0 0 0 0 5.0151E-07 1 60359 120.46 79.23 1 NaN NaN 0 5144200 0 5144200 15809 1639 5979 6117 24641 24641 IAFAITAIK 9 1 0 Unmodified _IAFAITAIK_ 0 0 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.3069 2 474.299853 946.585153 88068.84 0.43625 0.00020691 0.25495 0.00012092 0.6912 0.00032784 474.299726890163 478.307286036823 110.74 1.8603 110.74 109.92 111.78 7.6294E-06 278 91 9 0 0 0 0.023107 2 63969 48.794 33.355 1 1.0632 0.84785 0 19916000 10268000 9648200 15810 1639 5979 6117 24642;24643 24643 IAFAITAIK 9 1 0 Unmodified _IAFAITAIK_ 0 0 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.307 2 474.299853 946.585153 86069.08 0.47024 0.00022303 -0.042889 -2.0342E-05 0.42735 0.00020269 474.299580695825 478.307101908314 110.48 1.8257 110.48 109.76 111.59 -7.6294E-06 312 95 8 0 0 0 0.027097 2 62874 47.198 31.566 1 0.96442 0.78115 0 24211000 12741000 11470000 15811 1639 5979 6117 24644;24645 24645 IAFGGETDEATR 12 0 1 Unmodified _IAFGGETDEATR_ 0 0 0 J3QRD1;Q59H65;P51648;Q68D64;J3QS00;I3L1M4 J3QRD1 J3QRD1 ALDH3A2;DKFZp686E23276 Fatty aldehyde dehydrogenase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.801 2 633.801674 1265.58879 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.752 1 45.752 45.252 46.252 0 0 0 0 0.014973 1 24651 54.259 25.861 1 15812 1338 5980 6118 24646 24646 IAFGGETDEATR 12 0 1 Unmodified _IAFGGETDEATR_ 0 0 0 J3QRD1;Q59H65;P51648;Q68D64;J3QS00;I3L1M4 J3QRD1 J3QRD1 ALDH3A2;DKFZp686E23276 Fatty aldehyde dehydrogenase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3533 2 633.801674 1265.58879 76017.45 0.34692 0.00021988 0.37572 0.00023813 0.72264 0.00045801 633.801480214657 638.806049468835 45.836 0.6328 45.836 45.471 46.103 0 130 56 4 0 0 0 0.041346 1 24657 54.198 54.198 1 1.4392 1.466 0 27174000 10978000 16196000 15813 1338 5980 6118 24647 24647 IAFGGETDEATR 12 0 1 Unmodified _IAFGGETDEATR_ 0 0 0 J3QRD1;Q59H65;P51648;Q68D64;J3QS00;I3L1M4 J3QRD1 J3QRD1 ALDH3A2;DKFZp686E23276 Fatty aldehyde dehydrogenase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8031 2 633.801674 1265.58879 NaN NaN NaN -0.31114 -0.0001972 NaN NaN NaN NaN 44.859 0.39209 44.859 44.638 45.031 0 0 0 0 0.0035994 1 24529 65.5 39.941 1 NaN NaN 0 16389000 16389000 0 15814 1338 5980 6118 24648 24648 IAFGGETDEATR 12 0 1 Unmodified _IAFGGETDEATR_ 0 0 0 J3QRD1;Q59H65;P51648;Q68D64;J3QS00;I3L1M4 J3QRD1 J3QRD1 ALDH3A2;DKFZp686E23276 Fatty aldehyde dehydrogenase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.8014 2 633.801674 1265.58879 NaN NaN NaN 0.071993 4.5629E-05 NaN NaN NaN NaN 53.293 0.49867 53.293 53.024 53.523 -3.8147E-06 0 0 0 0.035782 1 25835 45.433 24.531 1 NaN NaN 0 694440 694440 0 15815 1338 5980 6118 24649 24649 IAFIMDESNVLDSGFLER 18 0 1 Oxidation (M) _IAFIM(ox)DESNVLDSGFLER_ IAFIM(1)DESNVLDSGFLER IAFIM(52.55)DESNVLDSGFLER 0 1 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1041.5093 2 1036.50388 2070.99321 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.67 1 121.67 121.17 122.17 0 0 0 0 0.0015509 1 80589 52.555 39.151 1 15816 1729 5981 6119 24650 24650 1564 IAFTEWIEPPK 11 1 0 Unmodified _IAFTEWIEPPK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.3644 2 665.855721 1329.69689 NaN NaN NaN 0.24894 0.00016576 NaN NaN NaN NaN 111.64 0.63327 111.64 111.35 111.98 -7.6294E-06 0 0 0 9.7016E-05 2 70274 93.111 69.682 1 NaN NaN 0 7986800 0 7986800 15817 1391 5982 6120 24651;24652 24651 IAFTEWIEPPK 11 1 0 Unmodified _IAFTEWIEPPK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.8636 2 665.855721 1329.69689 76214.1 0.63744 0.00042444 0.12163 8.0987E-05 0.75907 0.00050543 665.855458484107 669.862931966401 111.03 0.76095 111.03 110.69 111.45 0 164 55 5 0 0 0 2.3128E-05 1 71521 103.7 79.67 1 2.3563 2.3849 0 9020100 2496700 6523400 15818 1391 5982 6120 24653 24653 IAFTEWIEPPK 11 1 0 Unmodified _IAFTEWIEPPK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.8633 2 665.855721 1329.69689 NaN NaN NaN -0.035038 -2.3331E-05 NaN NaN NaN NaN 122.82 0.66335 122.82 122.44 123.11 0 0 0 0 0.0059116 1 73416 64.297 34.488 1 NaN NaN 0 1527800 0 1527800 15819 1391 5982 6120 24654 24654 IAFTEWIEPPK 11 1 0 Unmodified _IAFTEWIEPPK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.8641 2 665.855721 1329.69689 NaN NaN NaN 0.021387 1.4241E-05 NaN NaN NaN NaN 122.66 0.66647 122.66 122.34 123.01 -7.6294E-06 0 0 0 0.047985 1 72338 44.863 26.083 1 NaN NaN 0 1470600 0 1470600 15820 1391 5982 6120 24655 24655 IAFTEWIEPPKR 12 1 1 Unmodified _IAFTEWIEPPKR_ 0 0 1 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.2809 3 496.273276 1485.798 87511.11 0.68378 0.00033934 -0.31629 -0.00015697 0.36748 0.00018237 496.27346127521 502.280601850463 95.511 0.97974 95.511 94.999 95.978 0 366 82 7 0 0 0 0.0036367 1 59322 43.544 39.827 1 2.3672 2.7396 0 33218000 10062000 23156000 15821 1391 5983 6121 24656 24656 IAGAGLLFVGGGIGGTILYAK 21 1 0 Unmodified _IAGAGLLFVGGGIGGTILYAK_ 0 0 0 Q16891;B9A067;B4DQY2;B4DKR1;B4DT20;Q05DN3 Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 975.0701 2 974.566943 1947.11933 61685.11 -0.23308 -0.00022716 -0.23791 -0.00023186 -0.47099 -0.00045901 974.56642272539 979.075035961121 133.37 0.20245 133.37 133.22 133.43 0 20 5 7 0 0 0 8.0771E-22 1 87347 120.84 120.84 1 1.1886 1.2913 0 46878000 20512000 26365000 15822 1774 5984 6122 24657 24657 IAGVGSLPLSGVEEK 15 1 0 Unmodified _IAGVGSLPLSGVEEK_ 0 0 0 Q9UMN6 Q9UMN6 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.4072 2 728.406306 1454.79806 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.417 1 94.417 93.917 94.917 0 0 0 0 0.0063588 1 57351 51.841 30.377 1 15823 2113 5985 6123 24658 24658 IAGYVTHLMK 10 1 0 Oxidation (M) _IAGYVTHLM(ox)K_ IAGYVTHLM(1)K IAGYVTHLM(110.41)K 0 1 0 H0YN88;A0A075B716;P08708;A4D1Q6 H0YN88 H0YN88 RPS17;LOC392101 40S ribosomal protein S17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.8176 2 574.810259 1147.60597 78901.35 0.70832 0.00040715 -0.27667 -0.00015903 0.43164 0.00024811 574.810304049206 578.81726921356 37.259 0.22523 37.259 37.111 37.336 0 77 18 6 0 0 0 1.5021E-06 1 18929 110.41 110.41 1 1.7997 1.8691 0 29511000 10357000 19154000 15824 396 5986 6124 24659 24659 285 IAGYVTHLMK 10 1 0 Oxidation (M) _IAGYVTHLM(ox)K_ IAGYVTHLM(1)K IAGYVTHLM(83.62)K 0 1 0 H0YN88;A0A075B716;P08708;A4D1Q6 H0YN88 H0YN88 RPS17;LOC392101 40S ribosomal protein S17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.8113 2 574.810259 1147.60597 80067.95 1.0731 0.00061685 -0.18134 -0.00010424 0.89179 0.00051261 574.810502193898 578.817155278731 35.726 0.52013 35.726 35.54 36.061 0 142 42 6 0 0 0 0.00030962 2 18223 83.623 83.623 1 1.8324 1.8947 0 33003000 12717000 20287000 15825 396 5986 6124 24660;24661 24661 285 IAHIPLYFVNAQFPR 15 0 1 Unmodified _IAHIPLYFVNAQFPR_ 0 0 0 B4DDU7;Q53HS1;Q9NRG9;F8VZ44 B4DDU7 B4DDU7 AAAS Aladin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.3345 3 595.998146 1784.97261 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.73 1 112.73 112.23 113.23 0 0 0 0 0.032668 1 73008 46.481 36.284 1 15826 961 5987 6125 24662 24662 IAHLAQIEDDR 11 0 1 Unmodified _IAHLAQIEDDR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.5594 3 427.557964 1279.65206 92592.77 -0.096314 -4.118E-05 0.44352 0.00018963 0.34721 0.00014845 427.558144423228 430.894164524167 40.148 0.43394 40.148 39.936 40.37 0 125 35 5 0 0 0 0.0039827 2 20974 38.634 36.135 1 0.97434 0.99137 0 29792000 14435000 15356000 15827 684 5988 6126 24663;24664 24663 IAHLAQIEDDR 11 0 1 Unmodified _IAHLAQIEDDR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.9111 3 427.557964 1279.65206 93579.39 -0.29097 -0.0001244 0.25769 0.00011018 -0.033281 -1.4229E-05 427.558194457611 430.894018307576 38.694 0.53326 38.694 38.487 39.021 0 175 46 5 0 0 0 0.025577 1 20410 37.968 29.223 1 0.94749 1.0094 0 24456000 10682000 13773000 15828 684 5988 6126 24665 24665 IAILTCPFEPPKPK 14 2 0 Unmodified _IAILTCPFEPPKPK_ 0 0 1 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;Q96GI1;B4DX08;B4DZY9 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.98 3 537.637338 1609.89019 NaN NaN NaN -0.34103 -0.00018335 NaN NaN NaN NaN 91.214 0.5737 91.214 90.841 91.415 0 0 0 0 0.00017197 2 56294 86.291 51.606 1 NaN NaN 0 9952300 0 9952300 15829 960 5989 6127 24666;24667 24666 IAIPGLAGAGNSVLLVSNLNPER 23 0 1 Unmodified _IAIPGLAGAGNSVLLVSNLNPER_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;K7EK45 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1143.6473 2 1138.14207 2274.26958 64359.29 -0.39211 -0.00044627 1.0614 0.001208 0.66929 0.00076174 1138.14456884732 1143.64873994424 129.19 0.43091 129.19 128.95 129.38 0 131 35 6 0 0 0 1.7966E-08 2 84193 62.813 62.813 1 2.3758 2.6271 0 58700000 19818000 38882000 15830 592 5990 6128 24668;24669 24669 IAIPGLAGAGNSVLLVSNLNPER 23 0 1 Unmodified _IAIPGLAGAGNSVLLVSNLNPER_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;K7EK45 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1143.6489 2 1138.14207 2274.26958 63208.51 -0.16337 -0.00018593 0.6542 0.00074457 0.49083 0.00055863 1138.64257999291 1143.14917116587 128.8 0.49704 128.8 128.57 129.07 0 210 47 7 0 0 0 1.5856E-08 1 86038 64.565 64.565 1 2.4258 2.6494 0 38208000 9446900 28761000 15831 592 5990 6128 24670 24670 IAIYELLFK 9 1 0 Unmodified _IAIYELLFK_ 0 0 0 P46783;Q59GE4;F6U211;S4R435 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.3411 2 555.333893 1108.65323 81218.24 0.9096 0.00050513 -0.30918 -0.0001717 0.60042 0.00033343 555.333672000413 559.340686498436 125.76 1.0606 125.76 125.4 126.46 0 416 76 8 0 0 0 0.00092483 4 81598 92.439 92.439 1 1.2011 1.3568 0 81935000 36204000 45731000 15832 1573 5991 6129 24671;24672;24673;24674 24672 IAIYELLFK 9 1 0 Unmodified _IAIYELLFK_ 0 0 0 P46783;Q59GE4;F6U211;S4R435 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.3417 2 555.333893 1108.65323 80700.34 0.82223 0.00045661 -0.25763 -0.00014307 0.5646 0.00031354 555.333731055669 559.340704800111 125.22 0.77487 125.22 124.92 125.69 7.6294E-06 368 55 9 0 0 0 0.001665 2 83199 82.452 82.452 1 1.256 1.4047 0 108010000 46979000 61029000 15833 1573 5991 6129 24675;24676 24675 IAIYELLFK 9 1 0 Unmodified _IAIYELLFK_ 0 0 0 P46783;Q59GE4;F6U211;S4R435 P46783 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.3354 2 555.333893 1108.65323 81327.57 0.82962 0.00046072 0.2642 0.00014672 1.0938 0.00060744 555.334199232029 559.340959289691 125.76 0.20387 125.76 125.66 125.86 0 32 12 4 0 0 0 0.002701 2 83823 73.665 69.825 1 1.0915 1.2049 0 2544000 1261100 1283000 15834 1573 5991 6129 24677;24678 24678 IAIYLSK 7 1 0 Unmodified _IAIYLSK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.2593 2 404.252372 806.49019 94670.23 -0.11336 -4.5826E-05 -0.051447 -2.0798E-05 -0.16481 -6.6624E-05 404.252132316057 408.259402091181 62.758 0.86796 62.758 62.46 63.328 0 298 75 5 0 0 0 0.027367 1 36762 73.637 36.609 1 0.90749 1.0142 0 97315000 50043000 47272000 15835 897 5992 6130 24679 24679 IALALTAISLGTARPPPSMSAAGLAAR 27 0 2 Oxidation (M) _IALALTAISLGTARPPPSM(ox)SAAGLAAR_ IALALTAISLGTARPPPSM(1)SAAGLAAR IALALTAISLGTARPPPSM(62.24)SAAGLAAR 0 1 1 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.4954 3 865.154657 2592.44214 67312.04 0.8929 0.00077249 -0.82026 -0.00070966 0.072632 6.2838E-05 865.153892976843 871.826494776181 112.66 0.40244 112.66 112.42 112.82 0 93 29 5 0 0 0 7.8185E-16 1 71186 62.237 55.879 1 1.721 1.8873 0 12598000 6601700 5996800 15836 619 5993 6131 24680 24680 472 IALALTAISLGTARPPPSMSAAGLAAR 27 0 2 Oxidation (M) _IALALTAISLGTARPPPSM(ox)SAAGLAAR_ IALALTAISLGTARPPPSM(1)SAAGLAAR IALALTAISLGTARPPPSM(80.68)SAAGLAAR 0 1 1 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.1634 3 865.154657 2592.44214 66721.88 0.96581 0.00083558 -1.0103 -0.00087403 -0.044448 -3.8454E-05 865.153440666576 872.160993763687 111.99 0.38535 111.99 111.79 112.17 0 128 28 8 0 0 0 2.5249E-19 1 72320 80.683 80.683 1 1.1894 1.2476 0 13825000 6980700 6844700 15837 619 5993 6131 24681 24681 472 IALGIPLPEIK 11 1 0 Unmodified _IALGIPLPEIK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209;Q5R207 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.3812 2 582.373549 1162.73255 81070.44 0.68458 0.00039868 0.2324 0.00013535 0.91698 0.00053403 582.373497400529 586.380596895547 121.16 0.38078 121.16 120.96 121.34 7.6294E-06 99 25 5 0 0 0 0.027154 1 78308 40.352 40.352 1 1.8943 1.8618 0 8992800 3490300 5502600 15838 148 5994 6132 24682 24682 IALGIPLPEIK 11 1 0 Unmodified _IALGIPLPEIK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209;Q5R207 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.3813 2 582.373549 1162.73255 81472.23 0.90011 0.0005242 0.16351 9.5227E-05 1.0636 0.00061942 582.373872886499 586.380535334213 120.64 0.41085 120.64 120.44 120.85 0 108 29 5 0 0 0 0.0076189 1 79773 52.278 52.278 1 1.9325 2.017 0 10965000 4234700 6730300 15839 148 5994 6132 24683 24683 IALGIPLPEIK 11 1 0 Unmodified _IALGIPLPEIK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209;Q5R207 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.3749 2 582.373549 1162.73255 80936.73 0.69699 0.00040591 0.18724 0.00010904 0.88423 0.00051495 582.373629455409 586.380516940623 133.73 0.36993 133.73 133.57 133.94 0 50 14 5 0 0 0 0.016079 2 81494 46.001 46.001 1 0.93971 0.79552 0 1458000 804110 653930 15840 148 5994 6132 24684;24685 24685 IALGIPLPEIK 11 1 0 Unmodified _IALGIPLPEIK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209;Q5R207 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.381 2 582.373549 1162.73255 81201.38 0.98511 0.0005737 -0.27948 -0.00016276 0.70563 0.00041094 582.373329425377 586.38038435179 133.44 0.41283 133.44 133.24 133.65 0 47 14 5 0 0 0 0.0018904 2 80363 64.04 64.04 1 0.82928 0.68644 0 1622500 723320 899200 15841 148 5994 6132 24686;24687 24686 IALLGGGK 8 1 0 Unmodified _IALLGGGK_ 0 0 0 B4DNU0;Q53HH3;Q92759 B4DNU0 B4DNU0 GTF2H4 General transcription factor IIH subunit 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 364.7369 2 364.736889 727.459225 NaN NaN NaN 0.16055 5.8557E-05 NaN NaN NaN NaN 54.162 0.34004 54.162 53.921 54.261 0 0 0 0 0.020957 2 30301 64.803 25.042 1 NaN NaN 0 5139000 5139000 0 15842 1016 5995 6133 24688;24689 24688 IALLGGGK 8 1 0 Unmodified _IALLGGGK_ 0 0 0 B4DNU0;Q53HH3;Q92759 B4DNU0 B4DNU0 GTF2H4 General transcription factor IIH subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 368.7437 2 364.736889 727.459225 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.975 1 53.975 53.475 54.475 3.8147E-06 0 0 0 0.034402 1 30282 60.788 12.027 1 15843 1016 5995 6133 24690 24690 IALLGGGK 8 1 0 Unmodified _IALLGGGK_ 0 0 0 B4DNU0;Q53HH3;Q92759 B4DNU0 B4DNU0 GTF2H4 General transcription factor IIH subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 368.7443 2 364.736889 727.459225 102461.2 0.21545 7.8583E-05 3.2546 0.0011871 3.47 0.0012656 364.736787155643 368.743953811266 52.743 0.40192 52.743 52.484 52.886 0 95 30 5 0 0 0 0.013659 2 30084 64.803 16.63 1 0.83062 0.82917 0 14405000 8145100 6260200 15844 1016 5995 6133 24691;24692 24692 IALTDNALIAR 11 0 1 Unmodified _IALTDNALIAR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.8452 2 585.845687 1169.67682 81883.19 0.85602 0.0005015 -0.53256 -0.000312 0.32346 0.0001895 585.8450477913 590.849262551604 85.184 0.27592 85.184 84.972 85.248 7.6294E-06 45 21 4 0 0 0 0.0093816 2 51081 49.418 30.44 1 0.93248 0.97613 0 10839000 5005100 5833800 15845 240 5996 6134 24693;24694 24694 IALTDNALIAR 11 0 1 Unmodified _IALTDNALIAR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8499 2 585.845687 1169.67682 77890.6 0.54622 0.00032 -0.50089 -0.00029345 0.045324 2.6553E-05 585.845385467897 590.849513992932 86.114 1.4215 86.114 85.568 86.99 0 667 112 10 0 0 0 2.3866E-10 2 51563 134.23 73.317 1 0.9695 1.1515 0 931170000 482040000 449130000 15846 240 5996 6134 24695;24696 24695 IALTDNALIAR 11 0 1 Unmodified _IALTDNALIAR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 590.8499 2 585.845687 1169.67682 78661.54 0.58869 0.00034488 -0.076896 -4.5049E-05 0.51179 0.00029983 585.845635763464 590.849750137329 98.321 1.2366 98.321 98.008 99.244 0 408 72 10 0 0 0 0.00030188 4 55325 88.392 46.817 1 0.81206 0.70092 0 85348000 45591000 39756000 15847 240 5996 6134 24697;24698;24699;24700 24697 IALTDNALIAR 11 0 1 Unmodified _IALTDNALIAR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.8492 2 585.845687 1169.67682 78528.65 0.59835 0.00035054 -0.35895 -0.00021029 0.2394 0.00014025 585.845515506378 590.849575693201 98.196 1.4735 98.196 97.851 99.324 0 437 87 11 0 0 0 0.00038376 3 54432 82.749 43.728 1 0.79798 0.69625 0 56152000 30018000 26134000 15848 240 5996 6134 24701;24702;24703 24701 IALYGLGSIPDER 13 0 1 Unmodified _IALYGLGSIPDER_ 0 0 0 Q05D78;F8W7U8;A0A024R395;P49959;Q9BS79;F5GXT0 Q05D78 Q05D78 MRE11A Double-strand break repair protein MRE11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3817 2 702.380091 1402.74563 69598.69 0.72579 0.00050978 -0.67574 -0.00047463 0.050049 3.5153E-05 702.380441097587 707.384115156157 105.23 0.7089 105.23 104.92 105.63 7.6294E-06 161 54 4 0 0 0 0.00034597 2 65130 64.439 64.439 1 0.50663 0.50807 0 16168000 10719000 5448400 15849 131 5997 6135 24704;24705 24705 IALYGLGSIPDER 13 0 1 Unmodified _IALYGLGSIPDER_ 0 0 0 Q05D78;F8W7U8;A0A024R395;P49959;Q9BS79;F5GXT0 Q05D78 Q05D78 MRE11A Double-strand break repair protein MRE11A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.3845 2 702.380091 1402.74563 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.32 1 104.32 103.82 104.82 0 0 0 0 0.00032056 1 66077 88.441 57.367 1 15850 131 5997 6135 24706 24706 IANLAYVTK 9 1 0 Unmodified _IANLAYVTK_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;Q9H8T8 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.7996 2 496.792392 991.570232 NaN NaN NaN 0.14224 7.0662E-05 NaN NaN NaN NaN 56.94 0.53726 56.94 56.634 57.171 0 0 0 0 0.019405 1 32756 59.35 17.848 1 NaN NaN 0 6153700 0 6153700 15851 1102 5998 6136 24707 24707 IANLQTDLSDGLR 13 0 1 Unmodified _IANLQTDLSDGLR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.379 2 708.37808 1414.74161 71753.67 0.89892 0.00063678 0.95694 0.00067787 1.8559 0.0013146 708.378035671924 713.38316978269 86.284 0.63451 86.284 86.023 86.658 0 183 49 5 0 0 0 1.9071E-23 1 51894 152.62 129.98 1 2.1054 2.249 0 44665000 15569000 29096000 15852 1504 5999 6137 24708 24708 IANLQTDLSDGLR 13 0 1 Unmodified _IANLQTDLSDGLR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.3784 2 708.37808 1414.74161 72873.64 0.5294 0.00037501 -0.39587 -0.00028043 0.13352 9.4584E-05 708.37769872635 713.381903285346 85.414 0.60838 85.414 85.096 85.704 0 143 49 4 0 0 0 9.5254E-09 1 52469 115.57 91.485 1 1.6472 1.7347 0 23227000 10658000 12569000 15853 1504 5999 6137 24709 24709 IANPDQLLTQDVEK 14 1 0 Unmodified _IANPDQLLTQDVEK_ 0 0 0 B4DL07;P28288;B4DZ22 B4DL07 B4DL07 ABCD3 ATP-binding cassette sub-family D member 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.9191 2 792.417402 1582.82025 NaN NaN NaN -0.79287 -0.00062828 NaN NaN NaN NaN 88.315 0.18715 88.315 88.229 88.417 7.6294E-06 0 0 0 0.052094 1 54461 50.354 24.695 1 NaN NaN 0 6386600 6386600 0 15854 994 6000 6138 24710 24710 IANPDQLLTQDVEK 14 1 0 Unmodified _IANPDQLLTQDVEK_ 0 0 0 B4DL07;P28288;B4DZ22 B4DL07 B4DL07 ABCD3 ATP-binding cassette sub-family D member 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 796.4259 2 792.417402 1582.82025 70633.5 0.58342 0.00046231 0.029877 2.3675E-05 0.6133 0.00048599 792.41702090089 796.424914523506 102.48 0.2394 102.48 102.36 102.6 -7.6294E-06 39 18 4 0 0 0 0.02892 1 58122 31.431 31.431 1 1.7778 1.4567 0 2452200 1042900 1409300 15855 994 6000 6138 24711 24711 IANPVEGSSGR 11 0 1 Unmodified _IANPVEGSSGR_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.7803 2 543.780544 1085.54654 80672.08 0.59975 0.00032613 -0.26008 -0.00014142 0.33968 0.00018471 543.780060464937 548.784508266512 27.91 0.58033 27.91 27.538 28.119 0 182 38 10 0 0 0 6.013E-08 1 13076 115.82 82.984 1 1.5851 1.8014 0 111210000 46096000 65115000 15856 1759 6001 6139 24712 24712 IANPVEGSSGR 11 0 1 Unmodified _IANPVEGSSGR_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.7791 2 543.780544 1085.54654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.29 1 27.29 26.79 27.79 0 0 0 0 0.03965 1 12597 58.955 34.032 1 15857 1759 6001 6139 24713 24713 IANPVEGSSGR 11 0 1 Unmodified _IANPVEGSSGR_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.7848 2 543.780544 1085.54654 83094.05 0.43263 0.00023525 0.45911 0.00024965 0.89173 0.00048491 543.780380760984 548.784787414927 31.383 0.76711 31.383 31.104 31.871 1.9073E-06 200 46 9 0 0 0 0.00623 1 13266 54.784 27.48 1 1.1138 0.95747 0 6619400 3379800 3239600 15858 1759 6001 6139 24714 24714 IANPVEGSSGR 11 0 1 Unmodified _IANPVEGSSGR_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.7802 2 543.780544 1085.54654 81588.73 0.50224 0.00027311 -0.15528 -8.4439E-05 0.34695 0.00018867 543.780124650733 548.784579524695 31.448 0.77168 31.448 31.021 31.793 0 192 40 8 0 0 0 0.0074524 1 12769 52.579 33.484 1 1.3791 1.1524 0 4939100 2174900 2764200 15859 1759 6001 6139 24715 24715 IANPVEGSTDR 11 0 1 Unmodified _IANPVEGSTDR_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;F8VRH0;Q15366;H3BSS4 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.7963 2 579.791109 1157.56767 NaN NaN NaN -0.41137 -0.00023851 NaN NaN NaN NaN 31.722 0.95243 31.722 31.26 32.212 0 0 0 0 0.0012513 1 15477 84.658 46.572 1 NaN NaN 0 99251000 0 99251000 15860 1263;1760 6002 6140 24716 24716 IANPVEGSTDR 11 0 1 Unmodified _IANPVEGSTDR_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;F8VRH0;Q15366;H3BSS4 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.7963 2 579.791109 1157.56767 NaN NaN NaN -0.36531 -0.0002118 NaN NaN NaN NaN 31.187 0.87039 31.187 30.796 31.666 1.9073E-06 0 0 0 0.0024019 1 15184 74.944 36.858 1 NaN NaN 0 173260000 0 173260000 15861 1263;1760 6002 6140 24717 24717 IANQVAIQR 9 0 1 Unmodified _IANQVAIQR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93 A0A024R4W4 A0A024R4W4 BRD1 Bromodomain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.803 2 506.79854 1011.58253 NaN NaN NaN 0.59395 0.00030101 NaN NaN NaN NaN 31.034 0.36002 31.034 30.779 31.139 0 0 0 0 0.024092 1 15200 55.676 25.172 1 NaN NaN 0 4213400 0 4213400 15862 162 6003 6141 24718 24718 IANQVAIQR 9 0 1 Unmodified _IANQVAIQR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93 A0A024R4W4 A0A024R4W4 BRD1 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.7984 2 506.79854 1011.58253 86298.89 0.36139 0.00018315 0.094563 4.7925E-05 0.45596 0.00023108 506.798650246738 511.802876824209 30.736 0.75357 30.736 30.211 30.964 -1.9073E-06 125 63 4 0 0 0 2.1239E-05 1 15130 117.16 95.632 1 1.1636 1.1583 0 11760000 5435900 6323800 15863 162 6003 6141 24719 24719 IANVTLIDLR 10 0 1 Unmodified _IANVTLIDLR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.3433 2 564.342781 1126.67101 84176.51 0.91995 0.00051916 -0.071996 -4.063E-05 0.84795 0.00047853 564.342468734396 569.347304453323 112.35 0.40578 112.35 112.13 112.54 0 98 22 7 0 0 0 0.0055036 1 65248 60.064 46.158 1 0.52371 0.44457 0 5180400 3008100 2172300 15864 1323 6004 6142 24720 24720 IANVVINQSANDSK 14 1 0 Unmodified _IANVVINQSANDSK_ 0 0 0 Q2M1V9;A0A0A0MTH9;O14981 Q2M1V9 Q2M1V9 BTAF1 TATA-binding protein-associated factor 172 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.8976 2 736.888812 1471.76307 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.699 1 43.699 43.199 44.199 3.8147E-06 0 0 0 0.00035162 1 23777 85.813 41.495 1 15865 488 6005 6143 24721 24721 IAPAEAPDAK 10 1 0 Unmodified _IAPAEAPDAK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.7717 2 491.763832 981.513111 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.864 1 23.864 23.364 24.364 0 0 0 0 0.037291 1 9690 47.96 16.199 1 15866 1364 6006 6144 24722 24722 IAPELYHK 8 1 0 Unmodified _IAPELYHK_ 0 0 0 Q15046;Q6ZTI3 Q15046 Q15046 KARS Lysine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.7805 2 485.77146 969.528367 NaN NaN NaN 1.8814 0.00091392 NaN NaN NaN NaN 29.534 0.2567 29.534 29.357 29.614 -1.9073E-06 0 0 0 0.017319 1 14272 67.032 19.965 1 NaN NaN 0 6469700 0 6469700 15867 1749 6007 6145 24723 24723 IAPELYHK 8 1 0 Unmodified _IAPELYHK_ 0 0 0 Q15046;Q6ZTI3 Q15046 Q15046 KARS Lysine--tRNA ligase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.7722 2 485.77146 969.528367 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.083 1 29.083 28.583 29.583 0 0 0 0 0.021414 1 13961 67.032 26.18 1 15868 1749 6007 6145 24724 24724 IAPPEAPVTGYMFGK 15 1 0 Oxidation (M) _IAPPEAPVTGYM(ox)FGK_ IAPPEAPVTGYM(1)FGK IAPPEAPVTGYM(58.67)FGK 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.4045 2 797.402709 1592.79087 67065.48 0.66562 0.00053076 0.083835 6.685E-05 0.74945 0.00059761 797.402787865205 801.409740957377 88.402 1.0612 88.402 87.929 88.99 0 432 73 8 0 0 0 0.00018535 2 53582 58.674 58.674 1 0.86609 0.97971 0 148540000 81456000 67087000 15869 139 6008 6146 24725;24726 24726 120 IAPPEAPVTGYMFGK 15 1 0 Oxidation (M) _IAPPEAPVTGYM(ox)FGK_ IAPPEAPVTGYM(1)FGK IAPPEAPVTGYM(85.84)FGK 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.4104 2 797.402709 1592.79087 66885.33 0.80101 0.00063873 0.11933 9.5155E-05 0.92035 0.00073389 797.40285452791 801.409826527982 87.627 0.7336 87.627 87.17 87.904 0 369 56 9 0 0 0 2.1174E-05 1 53855 85.845 85.845 1 0.85664 0.98793 0 186030000 105430000 80602000 15870 139 6008 6146 24727 24727 120 IAPPEAPVTGYMFGK 15 1 0 Unmodified _IAPPEAPVTGYMFGK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.91 2 789.405252 1576.79595 70049.73 0.87933 0.00069415 1.054 0.00083203 1.9333 0.0015262 789.907494748917 793.412819420833 103.14 0.47613 103.14 102.83 103.31 0 109 40 4 0 0 0 0.019018 1 63453 43.68 43.68 1 0.57362 0.59462 0 11266000 7406900 3858900 15871 139 6008 6147 24728 24728 IAPPEAPVTGYMFGK 15 1 0 Unmodified _IAPPEAPVTGYMFGK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.9138 2 789.405252 1576.79595 70878.9 1.1406 0.00090043 -0.27199 -0.00021471 0.86866 0.00068572 789.405428294363 793.412328400213 102.35 0.56282 102.35 102.12 102.68 0 120 44 5 0 0 0 0.017855 1 64564 32.062 32.062 1 0.54418 0.56268 0 11397000 7284900 4112000 15872 139 6008 6147 24729 24729 IAPPEAPVTGYMFGK 15 1 0 Unmodified _IAPPEAPVTGYMFGK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.4125 2 789.405252 1576.79595 67164.48 0.81799 0.00064573 0.29783 0.00023511 1.1158 0.00088084 789.405546220658 793.412708034478 114.93 0.73894 114.93 114.48 115.21 7.6294E-06 176 34 9 0 0 0 0.00025347 2 67242 61.435 61.435 1 1.1987 0.94637 0 17960000 7414400 10545000 15873 139 6008 6147 24730;24731 24730 IAPPEAPVTGYMFGK 15 1 0 Unmodified _IAPPEAPVTGYMFGK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.4131 2 789.405252 1576.79595 67903.66 0.80835 0.00063812 0.094551 7.4639E-05 0.9029 0.00071276 789.40535238056 793.412559341224 114.77 0.6543 114.77 114.38 115.03 0 151 29 8 0 0 0 0.00079123 2 66173 49.934 49.934 1 1.2736 1.0208 0 19563000 8371300 11192000 15874 139 6008 6147 24732;24733 24732 IAPPETPDSK 10 1 0 Unmodified _IAPPETPDSK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.78 2 527.774396 1053.53424 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.519 1 30.519 30.019 31.019 0 0 0 0 0.037291 1 14933 47.96 20.473 1 15875 2087 6009 6148 24734 24734 IAPPETPDSK 10 1 0 Unmodified _IAPPETPDSK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.7818 2 527.774396 1053.53424 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.09 1 30.09 29.59 30.59 1.9073E-06 0 0 0 0.00050608 1 14674 71.451 21.324 1 15876 2087 6009 6148 24735 24735 IAPQYYDMSNFPQCEAK 17 1 0 Oxidation (M) _IAPQYYDM(ox)SNFPQCEAK_ IAPQYYDM(1)SNFPQCEAK IAPQYYDM(70.62)SNFPQCEAK 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1043.9598 2 1039.45333 2076.89211 61756.81 0.29375 0.00030534 -0.95957 -0.00099743 -0.66582 -0.00069209 1039.95469436519 1043.96044566774 69.546 0.50511 69.546 69.206 69.711 0 133 41 5 0 0 0 3.3653E-05 1 40302 70.622 70.622 1 1.4727 1.528 0 11331000 5136600 6194200 15877 1379 6010 6149 24736 24736 1045 IAPQYYDMSNFPQCEAK 17 1 0 Oxidation (M) _IAPQYYDM(ox)SNFPQCEAK_ IAPQYYDM(1)SNFPQCEAK IAPQYYDM(44.62)SNFPQCEAK 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1043.9603 2 1039.45333 2076.89211 59749.95 0.59489 0.00061836 -1.0882 -0.0011312 -0.49335 -0.00051282 1039.9545203841 1043.45909647988 68.411 0.49753 68.411 68.153 68.65 0 112 38 5 0 0 0 0.00043696 2 40530 44.616 44.616 1 1.5618 1.564 0 15667000 4720800 10946000 15878 1379 6010 6149 24737;24738 24737 1045 IAPRPASGPIRPIVR 15 0 3 Unmodified _IAPRPASGPIRPIVR_ 0 0 2 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.7508 4 400.750596 1598.97328 93763.05 0.3327 0.00013333 0.15415 6.1775E-05 0.48684 0.0001951 400.750697142761 408.256931980891 45.172 0.8629 45.172 44.737 45.6 3.8147E-06 346 77 10 0 0 0 0.00023764 2 24221 56.482 44.099 1 1.0256 1.1204 0 83949000 40690000 43258000 15879 733 6011 6150 24739;24740 24739 IAPRPASGPIRPIVR 15 0 3 Unmodified _IAPRPASGPIRPIVR_ 0 0 2 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.2565 4 400.750596 1598.97328 93999.29 0.16175 6.482E-05 0.16534 6.6261E-05 0.32709 0.00013108 400.750613220962 408.257010119506 42.23 0.65274 42.23 41.934 42.587 0 292 56 7 0 0 0 0.00027391 3 22726 54.898 21.181 1 0.89736 0.91032 0 96979000 45090000 51889000 15880 733 6011 6150 24741;24742;24743 24743 IAPSFAVESIEDALK 15 1 0 Unmodified _IAPSFAVESIEDALK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209;Q5R207;B7ZAW0 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.432 2 795.424696 1588.83484 NaN NaN NaN 0.99766 0.00079357 NaN NaN NaN NaN 123.27 0.39455 123.27 123.06 123.46 0 0 0 0 0.0046831 2 79826 56.951 39.516 1 NaN NaN 0 6531000 0 6531000 15881 148 6012 6151 24744;24745 24744 IAPSFAVESIEDALK 15 1 0 Unmodified _IAPSFAVESIEDALK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209;Q5R207;B7ZAW0 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.9344 2 795.424696 1588.83484 68993.53 1.1908 0.00094716 0.22022 0.00017517 1.411 0.0011223 795.926545799655 799.430920469733 122.79 0.5452 122.79 122.58 123.12 0 162 41 6 0 0 0 0.0003407 2 81372 59.57 59.57 1 1.9077 1.9947 0 10261000 3757700 6503300 15882 148 6012 6151 24746;24747 24746 IAPVHIDSEAISALVK 16 1 0 Unmodified _IAPVHIDSEAISALVK_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.657 3 554.985684 1661.93522 82552.23 0.70273 0.00039001 -0.77741 -0.00043145 -0.074679 -4.1446E-05 555.319835981621 557.656821611005 105 0.61101 105 104.68 105.29 0 158 48 6 0 0 0 0.0062388 2 66512 28.58 28.58 1 0.65029 0.65772 0 16431000 9458400 6972500 15883 1270 6013 6152 24748;24749 24749 IAPVHIDSEAISALVK 16 1 0 Unmodified _IAPVHIDSEAISALVK_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.3206 3 554.985684 1661.93522 80663.89 0.23833 0.00013227 0.32119 0.00017826 0.55952 0.00031053 554.985959439181 557.65726128853 116.74 0.41391 116.74 116.58 117 7.6294E-06 54 15 8 0 0 0 0.00012286 1 68665 50.608 50.608 1 0.70225 0.56376 0 7700800 4275200 3425600 15884 1270 6013 6152 24750 24750 IAPVHIDTESISALIK 16 1 0 Unmodified _IAPVHIDTESISALIK_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.3331 3 569.661089 1705.96144 84395.39 0.95427 0.00054361 -0.27657 -0.00015755 0.6777 0.00038606 569.994844158249 572.666554762031 110.97 0.4164 110.97 110.69 111.1 -7.6294E-06 76 25 5 0 0 0 0.017342 1 69636 22.475 22.475 1 0.714 0.74435 0 11704000 6330300 5374200 15885 2069 6014 6153 24751 24751 IAPVHIDTESISALIK 16 1 0 Unmodified _IAPVHIDTESISALIK_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.6664 3 569.661089 1705.96144 84291.16 0.84452 0.00048109 -0.63957 -0.00036434 0.20495 0.00011675 569.994745628021 572.332368393553 110.15 0.49401 110.15 109.88 110.37 0 85 30 4 0 0 0 0.037052 1 70801 18.234 18.234 1 0.75334 0.75201 0 14527000 8034700 6491800 15886 2069 6014 6153 24752 24752 IAPVHIDTESISALIK 16 1 0 Unmodified _IAPVHIDTESISALIK_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.3325 3 569.661089 1705.96144 81502.33 0.76141 0.00043374 -0.16338 -9.3069E-05 0.59803 0.00034068 569.994895749473 572.332238874358 121.64 0.29915 121.64 121.51 121.81 7.6294E-06 64 15 7 0 0 0 0.04558 1 72414 16.399 16.399 1 0.61125 0.48378 0 5003000 2960600 2042500 15887 2069 6014 6153 24753 24753 IAPVHIDTESISALIK 16 1 0 Unmodified _IAPVHIDTESISALIK_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.3333 3 569.661089 1705.96144 80020.94 0.70396 0.00040102 -0.16145 -9.1972E-05 0.54251 0.00030905 569.660803586096 572.666977211389 121.4 0.39561 121.4 121.21 121.61 7.6294E-06 89 21 7 0 0 0 0.048462 1 71288 15.779 15.779 1 0.61399 0.48101 0 3342000 2284800 1057200 15888 2069 6014 6153 24754 24754 IAPVIGLK 8 1 0 Unmodified _IAPVIGLK_ 0 0 0 P78345 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 409.7825 2 405.776014 809.537475 NaN NaN NaN 0.48029 0.00019489 NaN NaN NaN NaN 71.386 0.17667 71.386 71.288 71.464 0 0 0 0 0.050893 1 42806 49.59 24.958 1 NaN NaN 0 6286800 0 6286800 15889 1662 6015 6154 24755 24755 IAPYSVEIK 9 1 0 Unmodified _IAPYSVEIK_ 0 0 0 P78527;B4DL41;F5GX40 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.2924 2 510.292225 1018.5699 85360.36 0.4449 0.00022703 0.79115 0.00040372 1.2361 0.00063075 510.292028971008 514.30034076835 65.993 0.91245 65.993 65.553 66.465 0 224 71 8 0 0 0 0.0010049 2 38023 91.318 61.999 1 0.49983 0.56322 0 126260000 77307000 48953000 15890 1665 6016 6155 24756;24757 24756 IAPYSVEIK 9 1 0 Unmodified _IAPYSVEIK_ 0 0 0 P78527;B4DL41;F5GX40 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.2996 2 510.292225 1018.5699 85372.62 0.36817 0.00018787 0.56543 0.00028853 0.9336 0.00047641 510.292013280751 514.3000946465 64.784 1.0123 64.784 64.311 65.324 0 212 87 8 0 0 0 0.0043049 2 38133 69.598 46.092 1 0.57808 0.65626 0 141330000 87507000 53828000 15891 1665 6016 6155 24758;24759 24758 IAQETFDAAVR 11 0 1 Unmodified _IAQETFDAAVR_ 0 0 0 Q6NXE6;F5H2X2;F5H2K4;F5GWV0;F5H4P3;F5H3X1;F5H052;F5H7V0;F5GZP0 Q6NXE6 Q6NXE6 ARMC6 Armadillo repeat-containing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.3204 2 610.817127 1219.6197 81805.45 0.67828 0.0004143 0.083549 5.1033E-05 0.76183 0.00046534 610.817086388196 615.821385190265 55.932 0.41365 55.932 55.75 56.164 3.8147E-06 91 30 4 0 0 0 0.010982 1 31441 48.602 1.2673 1 1.248 1.3075 0 12483000 4212600 8270500 15892 1848 6017 6156 24760 24760 IAQETFDAAVR 11 0 1 Unmodified _IAQETFDAAVR_ 0 0 0 Q6NXE6;F5H2X2;F5H2K4;F5GWV0;F5H4P3;F5H3X1;F5H052;F5H7V0;F5GZP0 Q6NXE6 Q6NXE6 ARMC6 Armadillo repeat-containing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.8212 2 610.817127 1219.6197 78659.38 0.37438 0.00022868 -0.42587 -0.00026013 -0.051495 -3.1454E-05 610.816782824387 615.821195468441 55 0.49284 55 54.716 55.209 3.8147E-06 110 40 4 0 0 0 0.00033089 2 31461 86.898 3.7985 1 1.0975 1.0881 0 15785000 6693800 9091100 15893 1848 6017 6156 24761;24762 24762 IAQLEEQLDNETK 13 1 0 Unmodified _IAQLEEQLDNETK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.8929 2 765.885935 1529.75732 69381.54 0.59216 0.00045352 -0.45861 -0.00035125 0.13354 0.00010228 765.885789528965 769.892942397319 63.032 1.1541 63.032 62.689 63.843 3.8147E-06 681 113 10 0 0 0 1.7751E-61 4 36202 211.64 211.64 1 1.7042 1.9266 0 144750000 51276000 93470000 15894 81 6018 6157 24763;24764;24765;24766 24765 IAQLEEQLDNETK 13 1 0 Unmodified _IAQLEEQLDNETK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.8942 2 765.885935 1529.75732 NaN NaN NaN -0.15669 -0.00012001 NaN NaN NaN NaN 63.886 0.22164 63.886 63.843 64.065 3.8147E-06 0 0 0 0.0036336 1 36668 64.439 44.677 1 NaN NaN 0 4635700 0 4635700 15895 81 6018 6157 24767 24767 IAQLEEQLDNETK 13 1 0 Unmodified _IAQLEEQLDNETK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.8932 2 765.885935 1529.75732 70386.09 0.59056 0.00045231 -0.18775 -0.00014379 0.40282 0.00030851 765.885814539601 769.892943482202 62.077 1.3019 62.077 61.683 62.985 0 618 120 9 0 0 0 2.486E-39 2 36353 186.87 186.87 1 1.724 1.9505 0 133390000 50246000 83143000 15896 81 6018 6157 24768;24769 24769 IAQLEEQLDNETK 13 1 0 Unmodified _IAQLEEQLDNETK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.8934 2 765.885935 1529.75732 69449.03 0.6441 0.00049331 -0.13883 -0.00010633 0.50527 0.00038698 765.885799341065 769.89293855814 73.289 1.7256 73.289 72.902 74.627 0 519 119 9 0 0 0 5.3408E-14 3 38612 135.66 135.66 1 2.6977 2.1972 0 31429000 8350200 23079000 15897 81 6018 6157 24770;24771;24772 24770 IAQLEEQLDNETK 13 1 0 Unmodified _IAQLEEQLDNETK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 769.8932 2 765.885935 1529.75732 69984.69 0.68626 0.0005256 -0.28262 -0.00021645 0.40365 0.00030915 765.885718669498 769.892830753378 73.859 1.8146 73.859 73.476 75.291 0 520 120 9 0 0 0 0.00012284 2 38173 77.64 77.64 1 2.7346 2.2579 0 31135000 8395900 22739000 15898 81 6018 6157 24773;24774 24773 IAQLFSISPCQISQIYK 17 1 0 Unmodified _IAQLFSISPCQISQIYK_ 0 0 0 A0A024R120;Q12800;F8VWL0;F8VX55 A0A024R120 A0A024R120 TFCP2 Alpha-globin transcription factor CP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1002.5387 2 998.532243 1995.04993 63374.05 0.50274 0.000502 -1.2995 -0.0012976 -0.79678 -0.00079561 998.53234367509 1003.03850641357 121.59 0.3623 121.59 121.4 121.76 7.6294E-06 91 27 6 0 0 0 0.00019496 1 80508 50.207 50.207 1 1.5225 1.5275 0 6898900 2709100 4189800 15899 66 6019 6158 24775 24775 IAQPGDHVSVTGIFLPILR 19 0 1 Unmodified _IAQPGDHVSVTGIFLPILR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;C9J8M6 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.0604 3 678.389592 2032.14695 74400.73 0.55141 0.00037407 0.17363 0.00011779 0.72504 0.00049186 678.724040922161 682.059995914635 122.67 0.65921 122.67 122.38 123.04 0 304 48 8 0 0 0 1.7728E-06 2 79489 79.311 79.311 1 1.1378 1.1656 0 35948000 16177000 19770000 15900 560 6020 6159 24776;24777 24777 IAQPGDHVSVTGIFLPILR 19 0 1 Unmodified _IAQPGDHVSVTGIFLPILR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;C9J8M6 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.7249 3 678.389592 2032.14695 74207.98 0.8147 0.00055268 0.13727 9.3124E-05 0.95197 0.00064581 678.389745598177 682.059775696953 121.97 0.67432 121.97 121.63 122.3 0 317 47 9 0 0 0 5.9448E-06 1 80695 62.203 62.203 1 1.1255 1.2292 0 38187000 16331000 21856000 15901 560 6020 6159 24778 24778 IAQPGDHVSVTGIFLPILR 19 0 1 Unmodified _IAQPGDHVSVTGIFLPILR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;C9J8M6 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.3903 3 678.389592 2032.14695 74125.09 1.2546 0.00085113 -0.092796 -6.2952E-05 1.1618 0.00078817 678.72384352321 682.059975403993 134.32 0.18127 134.32 134.23 134.41 0 45 8 8 0 0 0 6.8632E-06 2 81975 60.528 60.528 1 0.75887 0.6192 0 14704000 7864600 6839500 15902 560 6020 6159 24779;24780 24779 IAQPGDHVSVTGIFLPILR 19 0 1 Unmodified _IAQPGDHVSVTGIFLPILR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;C9J8M6 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.0603 3 678.389592 2032.14695 74794.03 1.1794 0.0008001 -0.068937 -4.6766E-05 1.1105 0.00075334 678.723809805168 682.05985793314 134.2 0.24406 134.2 134.05 134.3 0 64 13 7 0 0 0 5.1153E-06 2 80931 65.47 65.47 1 0.82383 0.66438 0 11029000 5175500 5853300 15903 560 6020 6159 24781;24782 24782 IAQVSPGPR 9 0 1 Unmodified _IAQVSPGPR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.7667 2 462.766709 923.518865 87499.8 0.17463 8.0813E-05 0.27674 0.00012807 0.45137 0.00020888 462.766904079199 467.770856384913 24.408 0.42894 24.408 24.192 24.621 0 87 16 8 0 0 0 1.6569E-12 2 10148 161.9 110.93 1 1.2039 1.3741 0 122150000 54684000 67470000 15904 2059 6021 6160 24783;24784 24784 IAQVSPGPR 9 0 1 Unmodified _IAQVSPGPR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.7673 2 462.766709 923.518865 86783.88 -0.068659 -3.1773E-05 -0.5873 -0.00027178 -0.65596 -0.00030356 462.766810612126 467.770864154615 24.156 0.56135 24.156 23.932 24.494 0 114 23 8 0 0 0 5.5076E-06 2 9906 132.08 91.981 1 1.2021 1.3695 0 105090000 45937000 59155000 15905 2059 6021 6160 24785;24786 24786 IAQVSPGPR 9 0 1 Unmodified _IAQVSPGPR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 462.7673 2 462.766709 923.518865 84616.73 0.1906 8.8205E-05 -0.12746 -5.8983E-05 0.063144 2.9221E-05 462.766700820212 467.770895042284 26.66 0.7061 26.66 26.238 26.944 1.9073E-06 142 32 8 0 0 0 0.0022292 2 10094 75.109 35.006 1 1.9245 1.5915 0 19526000 6475800 13051000 15906 2059 6021 6160 24787;24788 24788 IAQVSPGPR 9 0 1 Unmodified _IAQVSPGPR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.7705 2 462.766709 923.518865 84850.3 -0.033502 -1.5504E-05 0.016541 7.6545E-06 -0.016961 -7.849E-06 462.766816072013 467.770914053842 26.669 0.75571 26.669 26.19 26.946 1.9073E-06 168 35 9 0 0 0 0.027097 1 9550 47.198 18.98 1 2.0489 1.6658 0 12325000 3576800 8747700 15907 2059 6021 6160 24789 24789 IASFPTAK 8 1 0 Unmodified _IASFPTAK_ 0 0 0 A0A024RD99;B7Z2D8;B7Z5F9;B3KP14;H0Y8R1;F5H5I6;B7Z3R7;H0YAK1;B3KW50;Q12849 A0A024RD99 A0A024RD99 GRSF1 G-rich sequence factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.7465 2 417.739628 833.464704 94353.34 0.22398 9.3566E-05 -0.71926 -0.00030046 -0.49528 -0.0002069 417.739158828149 421.74657005288 39.275 0.38737 39.275 39.051 39.438 0 93 34 4 0 0 0 0.0087497 1 20766 77.282 21.841 1 1.7126 1.7731 0 18660000 6145300 12515000 15908 381 6022 6161 24790 24790 IASGLGLAWIVGR 13 0 1 Unmodified _IASGLGLAWIVGR_ 0 0 0 Q53GB9;A0A024R8Z1;Q5VV89;O14880;Q5VV87 Q53GB9 Q53GB9 MGST3 Microsomal glutathione S-transferase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.3972 2 656.890429 1311.76631 74890.81 0.84428 0.0005546 -0.047275 -3.1054E-05 0.79701 0.00052355 656.890327639095 661.894504118117 120.93 0.82105 120.93 120.61 121.43 0 280 56 8 0 0 0 4.5296E-09 2 77856 120.68 94.168 1 2.0902 2.3279 0 80844000 27045000 53799000 15909 265 6023 6162 24791;24792 24791 IASGLGLAWIVGR 13 0 1 Unmodified _IASGLGLAWIVGR_ 0 0 0 Q53GB9;A0A024R8Z1;Q5VV89;O14880;Q5VV87 Q53GB9 Q53GB9 MGST3 Microsomal glutathione S-transferase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.8951 2 656.890429 1311.76631 74899.4 1.0395 0.00068281 -0.14496 -9.5226E-05 0.89449 0.00058758 656.890215463956 661.894437686017 120.37 0.81075 120.37 120.08 120.89 0 286 58 8 0 0 0 5.4423E-19 2 79336 145.89 117.16 1 2.2084 2.5211 0 92125000 28685000 63440000 15910 265 6023 6162 24793;24794 24793 IASGLGLAWIVGR 13 0 1 Unmodified _IASGLGLAWIVGR_ 0 0 0 Q53GB9;A0A024R8Z1;Q5VV89;O14880;Q5VV87 Q53GB9 Q53GB9 MGST3 Microsomal glutathione S-transferase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.8956 2 656.890429 1311.76631 75600.24 0.99446 0.00065325 -0.17262 -0.00011339 0.82184 0.00053986 656.889510707217 661.89465899842 133.27 0.6087 133.27 133.06 133.67 1.5259E-05 133 26 8 0 0 0 8.3598E-09 1 81072 116.77 89.024 1 1.7226 1.4233 0 11424000 3792500 7631900 15911 265 6023 6162 24795 24795 IASGLGLAWIVGR 13 0 1 Unmodified _IASGLGLAWIVGR_ 0 0 0 Q53GB9;A0A024R8Z1;Q5VV89;O14880;Q5VV87 Q53GB9 Q53GB9 MGST3 Microsomal glutathione S-transferase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.8955 2 656.890429 1311.76631 75898.62 1.1516 0.00075646 -0.014098 -9.2609E-06 1.1375 0.0007472 656.889914098283 661.894685071569 132.99 0.56703 132.99 132.77 133.33 0 117 25 6 0 0 0 0.00018517 1 79943 71.221 43.479 1 1.6706 1.3692 0 13524000 5222100 8301700 15912 265 6023 6162 24796 24796 IASHYYITNDTVQTYNQLLK 20 1 0 Unmodified _IASHYYITNDTVQTYNQLLK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.0763 3 795.741018 2384.20123 68198.37 1.3267 0.0010557 0.084476 6.7221E-05 1.4112 0.0011229 796.075338013279 798.412943711168 96.348 0.82234 96.348 95.813 96.636 0 375 72 7 0 0 0 0.0016632 1 58497 28.14 28.14 1 1.1325 1.222 0 37248000 19262000 17985000 15913 1411 6024 6163 24797 24797 IASHYYITNDTVQTYNQLLK 20 1 0 Unmodified _IASHYYITNDTVQTYNQLLK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.4133 3 795.741018 2384.20123 68061.03 0.81915 0.00065183 -0.18635 -0.00014828 0.63281 0.00050355 795.740995542282 798.746632923637 94.92 0.80901 94.92 94.564 95.373 0 382 69 8 0 0 0 1.9367E-07 3 58884 81.723 81.723 1 0.9565 1.0592 0 46072000 28554000 17518000 15914 1411 6024 6163 24798;24799;24800 24799 IASHYYITNDTVQTYNQLLK 20 1 0 Unmodified _IASHYYITNDTVQTYNQLLK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.7424 3 795.741018 2384.20123 67674.73 0.79777 0.00063482 0.32556 0.00025906 1.1233 0.00089388 796.075348323753 798.746959453908 108.67 0.4151 108.67 108.46 108.88 7.6294E-06 121 20 9 0 0 0 2.3668E-06 2 62405 50.404 50.404 1 0.98672 0.78714 0 9457500 5036100 4421400 15915 1411 6024 6163 24801;24802 24802 IASHYYITNDTVQTYNQLLK 20 1 0 Unmodified _IASHYYITNDTVQTYNQLLK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 798.7473 3 795.741018 2384.20123 68637.13 0.68991 0.00054899 -0.079076 -6.2924E-05 0.61083 0.00048606 795.741069780197 798.746605866319 108.5 0.40208 108.5 108.31 108.71 -7.6294E-06 121 20 9 0 0 0 3.4476E-05 2 61382 43.164 43.164 1 0.9313 0.75857 0 7428200 4147700 3280500 15916 1411 6024 6163 24803;24804 24803 IASLEVENQSLR 12 0 1 Unmodified _IASLEVENQSLR_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;Q9BW34;A0A087X1X7;Q71RH4;Q9H7G6;E9PQ49;E9PI39;E9PMW7;E9PIZ1;E9PPR1;E9PL12;E9PL71;H0YCK7;E9PN91 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.8712 2 679.867348 1357.72014 NaN NaN NaN -1.8994 -0.0012914 NaN NaN NaN NaN 65.742 0.5023 65.742 65.51 66.012 0 0 0 0 0.00066952 1 38807 86.463 4.5123 1 NaN NaN 0 19565000 0 19565000 15917 875 6025 6164 24805 24805 IASNVLNTK 9 1 0 Unmodified _IASNVLNTK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BRD0 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.2863 2 480.279649 958.544745 88293.44 0.86572 0.00041579 -0.10097 -4.8495E-05 0.76475 0.00036729 480.279329229092 484.286765168831 35.223 0.39581 35.223 34.999 35.395 0 104 36 5 0 0 0 0.0019924 1 17967 78.192 42.943 1 0.86729 0.93944 0 22448000 11100000 11347000 15918 1699 6026 6165 24806 24806 IASPEGQDYLK 11 1 0 Unmodified _IASPEGQDYLK_ 0 0 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.3129 2 610.81151 1219.60847 77935.05 0.6429 0.00039269 0.17935 0.00010955 0.82225 0.00050224 611.312768393102 614.818698546655 51.616 0.83429 51.616 51.242 52.076 0 280 72 8 0 0 0 0.00026738 1 28515 89.886 45.491 1 1.0854 1.2288 0 89031000 45054000 43977000 15919 2137 6027 6166 24807 24807 IASPEGQDYLK 11 1 0 Unmodified _IASPEGQDYLK_ 0 0 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.821 2 610.81151 1219.60847 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.357 1 51.357 50.857 51.857 0 0 0 0 3.3915E-06 1 28412 97.565 48.769 1 15920 2137 6027 6166 24808 24808 IASPEGQDYLK 11 1 0 Unmodified _IASPEGQDYLK_ 0 0 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.8193 2 610.81151 1219.60847 76095.92 0.46554 0.00028436 0.25708 0.00015703 0.72263 0.00044139 610.811503552831 614.818735137608 50.378 0.58732 50.378 49.914 50.502 0 203 42 8 0 0 0 0.00041003 2 28343 80.688 49.615 1 1.1826 1.367 0 198390000 98021000 100370000 15921 2137 6027 6166 24809;24810 24810 IASPEGQDYLK 11 1 0 Unmodified _IASPEGQDYLK_ 0 0 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.819 2 610.81151 1219.60847 77278.63 0.25967 0.00015861 0.2019 0.00012333 0.46158 0.00028194 610.811453838604 614.818822154478 59.486 0.96209 59.486 59.123 60.085 0 339 70 6 0 0 0 0.020958 2 30280 43.512 20.084 1 1.188 0.94188 0 4299100 1873500 2425600 15922 2137 6027 6166 24811;24812 24812 IASPEGQDYLK 11 1 0 Unmodified _IASPEGQDYLK_ 0 0 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.8187 2 610.81151 1219.60847 79562.8 0.38033 0.00023231 0.16235 9.9166E-05 0.54268 0.00033147 610.811580127461 614.81881204512 60.132 0.95602 60.132 59.681 60.637 0 273 69 6 0 0 0 0.0068404 1 29990 53.683 23.873 1 1.3543 1.1059 0 5650700 2402500 3248200 15923 2137 6027 6166 24813 24813 IASWADLVNAHVVPGSGVVK 20 1 0 Unmodified _IASWADLVNAHVVPGSGVVK_ 0 0 0 A8K5J1;P11172;B5LY71;B5LY70;B5LY64 A8K5J1 A8K5J1 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase;Orotidine 5-phosphate decarboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.7068 3 673.70558 2018.09491 76119.98 0.78573 0.00052935 0.17966 0.00012104 0.96539 0.00065039 674.039840968106 676.37649395896 111.22 0.46155 111.22 110.98 111.44 0 108 32 6 0 0 0 2.2273E-06 2 69972 51.566 51.566 1 2.3896 2.5252 0 16290000 7838900 8450600 15924 749 6028 6167 24814;24815 24815 IASWADLVNAHVVPGSGVVK 20 1 0 Unmodified _IASWADLVNAHVVPGSGVVK_ 0 0 0 A8K5J1;P11172;B5LY71;B5LY70;B5LY64 A8K5J1 A8K5J1 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase;Orotidine 5-phosphate decarboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.0386 3 673.70558 2018.09491 74941.94 0.73893 0.00049782 -0.12303 -8.2886E-05 0.6159 0.00041493 674.039787341278 676.376571855906 110.55 0.41947 110.55 110.33 110.75 0 148 30 6 0 0 0 2.1395E-06 3 71192 52.298 52.298 1 2.2637 2.3329 0 18176000 6522000 11654000 15925 749 6028 6167 24816;24817;24818 24818 IATGHGQQGVTQVVLK 16 1 0 Unmodified _IATGHGQQGVTQVVLK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.9777 3 545.977411 1634.9104 81740.38 0.62155 0.00033935 -0.14335 -7.8264E-05 0.47821 0.00026109 545.977301529886 548.648768422681 47.682 0.3998 47.682 47.45 47.85 3.8147E-06 174 35 6 0 0 0 2.6565E-05 2 25903 80.609 80.609 1 0.76297 0.82978 0 47996000 20172000 27824000 15926 680 6029 6168 24819;24820 24820 IATGHGQQGVTQVVLK 16 1 0 Unmodified _IATGHGQQGVTQVVLK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.462 2 818.462478 1634.9104 NaN NaN NaN 0.54176 0.00044341 NaN NaN NaN NaN 47.702 0.23181 47.702 47.55 47.782 0 0 0 0 3.5585E-19 1 25884 129.77 107.74 1 NaN NaN 0 5658900 5658900 0 15927 680 6029 6168 24821 24821 IATGHGQQGVTQVVLK 16 1 0 Unmodified _IATGHGQQGVTQVVLK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.9777 3 545.977411 1634.9104 81790.84 0.24437 0.00013342 0.13447 7.3418E-05 0.37885 0.00020684 545.977442806311 548.648856327908 46.05 0.46593 46.05 45.789 46.255 3.8147E-06 169 33 8 0 0 0 0.00054285 1 25318 43.791 43.791 1 0.67116 0.72669 0 38770000 21225000 17545000 15928 680 6029 6168 24822 24822 IATGHGQQGVTQVVLK 16 1 0 Unmodified _IATGHGQQGVTQVVLK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.6503 3 545.977411 1634.9104 82111.02 0.60277 0.0003291 -0.28163 -0.00015376 0.32114 0.00017534 545.977331888548 548.648727022406 55.004 0.52817 55.004 54.774 55.302 -3.8147E-06 182 35 8 0 0 0 0.054781 1 27437 14.419 14.419 1 1.6177 1.2829 0 4609800 1797200 2812600 15929 680 6029 6168 24823 24823 IATPEEVR 8 0 1 Unmodified _IATPEEVR_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YHQ7 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.7541 2 457.750724 913.486896 96294.88 0.26635 0.00012192 -1.1399 -0.00052179 -0.87356 -0.00039987 457.750424575401 462.754456205749 30.751 0.43967 30.751 30.499 30.938 0 115 38 6 0 0 0 0.0056635 1 15101 89.752 40.162 1 1.051 1.0389 0 15147000 5954700 9192400 15930 1260 6030 6169 24824 24824 IATTTASAATAAAIGATPR 19 0 1 Unmodified _IATTTASAATAAAIGATPR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 858.4689 2 858.467958 1714.92136 65738.66 0.55939 0.00048022 0.061957 5.3188E-05 0.62135 0.00053341 858.969466143103 863.472154937521 74.855 0.57803 74.855 74.574 75.152 0 283 49 8 0 0 0 4.4178E-30 2 43885 140.74 132.22 1 0.68989 0.76295 0 58990000 35682000 23308000 15931 186;1747 6031 6170 24825;24826 24826 IATTTASAATAAAIGATPR 19 0 1 Unmodified _IATTTASAATAAAIGATPR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.4672 2 858.467958 1714.92136 65972.65 0.54939 0.00047163 0.091827 7.883E-05 0.64121 0.00055046 858.468056124136 863.472203463185 73.841 0.55264 73.841 73.538 74.09 0 269 44 8 0 0 0 1.6379E-16 2 44189 112.72 112.72 1 0.72383 0.83552 0 55417000 33113000 22303000 15932 186;1747 6031 6170 24827;24828 24827 IATTTASAATAAAIGATPR 19 0 1 Unmodified _IATTTASAATAAAIGATPR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 863.9747 2 858.467958 1714.92136 65236.18 0.50691 0.00043517 -0.02105 -1.8071E-05 0.48586 0.0004171 858.467907126545 863.472171556217 86.232 0.76374 86.232 85.889 86.652 7.6294E-06 359 52 10 0 0 0 3.0653E-05 2 47147 55.885 55.885 1 0.89712 0.75609 0 28320000 15310000 13010000 15933 186;1747 6031 6170 24829;24830 24829 IATTTASAATAAAIGATPR 19 0 1 Unmodified _IATTTASAATAAAIGATPR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.9702 2 858.467958 1714.92136 64719.45 0.51631 0.00044324 -0.17232 -0.00014793 0.34399 0.0002953 858.467777300945 863.472019670004 86.393 0.64334 86.393 86.082 86.725 0 276 36 10 0 0 0 1.9171E-05 2 46445 62.377 62.377 1 0.9415 0.82129 0 26466000 13959000 12507000 15934 186;1747 6031 6170 24831;24832 24832 IAVEPVNPSELPK 13 1 0 Unmodified _IAVEPVNPSELPK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.8902 2 696.890292 1391.76603 74475.94 0.61982 0.00043194 0.10841 7.5549E-05 0.72822 0.00050749 696.890408966449 700.897415684458 85.923 0.71533 85.923 85.556 86.272 0 333 60 7 0 0 0 0.00015763 2 51554 87.789 76.326 1 0.89803 1.0097 0 70740000 36744000 33997000 15935 794 6032 6171 24833;24834 24833 IAVEPVNPSELPK 13 1 0 Unmodified _IAVEPVNPSELPK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.8904 2 696.890292 1391.76603 74158.29 1.0025 0.00069865 -0.18302 -0.00012755 0.8195 0.0005711 696.890185490547 700.897192660496 84.905 0.75496 84.905 84.665 85.42 -7.6294E-06 371 64 8 0 0 0 0.00011214 2 52185 75.695 75.695 1 0.97554 1.0899 0 89348000 45965000 43383000 15936 794 6032 6171 24835;24836 24836 IAVEPVNPSELPK 13 1 0 Unmodified _IAVEPVNPSELPK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.8917 2 696.890292 1391.76603 73634.84 0.58993 0.00041112 0.11593 8.0791E-05 0.70586 0.00049191 696.890416746012 700.897241930545 98.718 0.63345 98.718 98.449 99.082 0 207 39 7 0 0 0 0.00020824 2 55633 70.1 52.236 1 0.89444 0.71503 0 8942600 4202200 4740400 15937 794 6032 6171 24837;24838 24838 IAVEPVNPSELPK 13 1 0 Unmodified _IAVEPVNPSELPK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.8903 2 696.890292 1391.76603 73673.51 0.63637 0.00044348 0.27452 0.00019131 0.9109 0.00063479 696.890470274806 700.89739013363 98.596 0.55009 98.596 98.326 98.876 0 183 33 7 0 0 0 0.00088915 1 54693 60.064 46.294 1 0.90917 0.74486 0 8667800 4813200 3854600 15938 794 6032 6171 24839 24839 IAVHCTVR 8 0 1 Unmodified _IAVHCTVR_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2602 2 478.260736 954.50692 85929.14 -0.083195 -3.9789E-05 -0.038217 -1.8278E-05 -0.12141 -5.8067E-05 478.260664319017 483.265188721902 20.601 0.58224 20.601 20.432 21.014 0 129 25 10 0 0 0 0.0015374 2 6983 108.09 60.172 1 1.0493 1.2306 0 217400000 119630000 97770000 15939 1652 6033 6172 24840;24841 24841 IAVHCTVR 8 0 1 Unmodified _IAVHCTVR_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 322.512 3 319.17625 954.50692 103533.8 -0.11207 -3.5769E-05 -0.24118 -7.6978E-05 -0.35324 -0.00011275 319.176278811296 322.512261187168 20.596 0.7834 20.596 20.432 21.215 0 142 35 10 0 0 0 0.013127 1 6980 41.448 5.053 1 0.79418 0.93955 0 309060000 174150000 134910000 15940 1652 6033 6172 24842 24842 IAVHCTVR 8 0 1 Unmodified _IAVHCTVR_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 322.5128 3 319.17625 954.50692 104040.1 0.24296 7.7546E-05 -0.48171 -0.00015375 -0.23875 -7.6204E-05 319.176198204738 322.512123799572 20.397 0.8442 20.397 20.043 20.888 0 96 27 8 0 0 0 0.0099943 2 6652 46.158 8.5729 1 0.81337 0.9501 0 561130000 310100000 251030000 15941 1652 6033 6172 24843;24844 24843 IAVHCTVR 8 0 1 Unmodified _IAVHCTVR_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.2644 2 478.260736 954.50692 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.399 1 20.399 19.899 20.899 0 0 0 0 0.030744 1 6682 62.546 3.7272 1 15942 1652 6033 6172 24845 24845 IAVHCTVR 8 0 1 Unmodified _IAVHCTVR_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 319.1761 3 319.17625 954.50692 104765.5 -0.39761 -0.00012691 0.083026 2.65E-05 -0.31458 -0.00010041 319.176255288102 322.51233220351 22.062 0.60132 22.062 21.865 22.466 0 105 22 8 0 0 0 0.018326 2 6903 37.812 14.74 1 0.98178 0.84115 0 40990000 21692000 19298000 15943 1652 6033 6172 24846;24847 24847 IAVHCTVR 8 0 1 Unmodified _IAVHCTVR_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.2607 2 478.260736 954.50692 83080.73 -0.14933 -7.1417E-05 -1.7576 -0.00084057 -1.9069 -0.00091199 478.260451686501 483.265029703473 22.04 0.67483 22.04 21.711 22.386 0 104 25 11 0 0 0 0.030859 2 6958 51.662 31.004 1 1.5017 1.258 0 25094000 11057000 14037000 15944 1652 6033 6172 24848;24849 24849 IAVHCTVR 8 0 1 Unmodified _IAVHCTVR_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 319.176 3 319.17625 954.50692 103944.9 -0.48786 -0.00015571 0.36734 0.00011724 -0.12053 -3.8469E-05 319.176369918002 322.512406951746 21.862 0.50798 21.862 21.667 22.175 -1.9073E-06 89 17 9 0 0 0 0.011324 1 6323 43.083 20.012 1 1.027 0.89584 0 26121000 12460000 13662000 15945 1652 6033 6172 24850 24850 IAVHPDYQGMGYGSR 15 0 1 Oxidation (M) _IAVHPDYQGM(ox)GYGSR_ IAVHPDYQGM(1)GYGSR IAVHPDYQGM(79.02)GYGSR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.2599 3 556.25959 1665.75694 80099.37 0.80406 0.00044727 -0.38676 -0.00021514 0.4173 0.00023213 556.259485894092 559.595541518373 37.388 0.76906 37.388 37.203 37.972 0 420 63 10 0 0 0 3.9781E-05 2 18980 79.022 79.022 1 1.1435 1.3523 0 279220000 128370000 150850000 15946 2023 6034 6173 24851;24852 24852 1861 IAVHPDYQGMGYGSR 15 0 1 Oxidation (M) _IAVHPDYQGM(ox)GYGSR_ IAVHPDYQGM(1)GYGSR IAVHPDYQGM(78.55)GYGSR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.8874 2 833.885746 1665.75694 66651.77 0.89834 0.00074911 0.06198 5.1685E-05 0.96032 0.0008008 833.885903608068 838.88980752824 37.393 0.466 37.393 37.217 37.683 0 136 38 6 0 0 0 7.9889E-05 1 19001 78.548 74.502 1 1.2052 1.3378 0 69707000 32239000 37468000 15947 2023 6034 6173 24853 24853 1861 IAVHPDYQGMGYGSR 15 0 1 Oxidation (M) _IAVHPDYQGM(ox)GYGSR_ IAVHPDYQGM(1)GYGSR IAVHPDYQGM(79.89)GYGSR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.2607 3 556.25959 1665.75694 80743.61 0.80135 0.00044576 -0.45397 -0.00025252 0.34738 0.00019323 556.25946526302 559.595499131362 36.297 0.69135 36.297 36.038 36.729 0 420 57 10 0 0 0 3.6147E-05 2 18526 79.885 79.885 1 1.1609 1.3343 0 199240000 92539000 106700000 15948 2023 6034 6173 24854;24855 24855 1861 IAVHPDYQGMGYGSR 15 0 1 Oxidation (M) _IAVHPDYQGM(ox)GYGSR_ IAVHPDYQGM(1)GYGSR IAVHPDYQGM(43.38)GYGSR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.8906 2 833.885746 1665.75694 66379.7 0.91067 0.00075939 -0.24198 -0.00020178 0.66869 0.00055761 833.885697957378 838.889775598824 36.307 0.34373 36.307 36.102 36.446 0 153 29 8 0 0 0 0.0014427 1 18545 43.382 33.429 1 1.1847 1.295 0 36006000 15636000 20370000 15949 2023 6034 6173 24856 24856 1861 IAVHPDYQGMGYGSR 15 0 1 Oxidation (M) _IAVHPDYQGM(ox)GYGSR_ IAVHPDYQGM(1)GYGSR IAVHPDYQGM(40.86)GYGSR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.596 3 556.25959 1665.75694 79774.05 0.39755 0.00022114 -0.47788 -0.00026582 -0.080326 -4.4682E-05 556.259382822296 559.595471968952 43.384 0.69227 43.384 43.148 43.84 3.8147E-06 276 43 10 0 0 0 0.0009795 1 19837 40.857 37.601 1 1.0074 0.87334 0 23759000 11699000 12060000 15950 2023 6034 6173 24857 24857 1861 IAVHPDYQGMGYGSR 15 0 1 Unmodified _IAVHPDYQGMGYGSR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.2642 3 550.927951 1649.76202 80925.85 0.34486 0.00018999 0.030617 1.6868E-05 0.37548 0.00020686 551.262128995812 554.264206308299 61.473 0.67812 61.473 61.215 61.894 3.8147E-06 277 54 8 0 0 0 0.007195 1 31389 22.475 17.584 1 1.3698 1.1793 0 7379800 2967600 4412300 15951 2023 6034 6174 24858 24858 IAVHPDYQGMGYGSR 15 0 1 Unmodified _IAVHPDYQGMGYGSR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.5994 3 550.927951 1649.76202 80459.85 0.37205 0.00020498 -0.18983 -0.00010458 0.18223 0.00010039 550.927947164976 554.264009021962 62.014 0.58434 62.014 61.789 62.373 0 254 42 8 0 0 0 0.021934 2 31045 17.489 12.598 1 1.3725 1.1422 0 7235700 3044500 4191300 15952 2023 6034 6174 24859;24860 24859 IAVSNLHK 8 1 0 Unmodified _IAVSNLHK_ 0 0 0 B4DNN4;Q53GZ5;P23921 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.271 2 441.263802 880.513051 NaN NaN NaN 0.54723 0.00024147 NaN NaN NaN NaN 23.301 0.44955 23.301 23.126 23.575 0 0 0 0 0.0083469 1 9181 80.229 41.011 1 NaN NaN 0 16958000 0 16958000 15953 1014 6035 6175 24861 24861 IAVYHLQELASAELAK 16 1 0 Unmodified _IAVYHLQELASAELAK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.3029 3 585.992838 1754.95669 80239.39 0.53584 0.000314 0.37691 0.00022087 0.91275 0.00053486 585.992908721383 588.998537343896 97.869 0.9708 97.869 97.231 98.201 0 278 79 5 0 0 0 1.8287E-05 1 61247 66.022 66.022 1 0.38931 0.40053 0 18004000 11844000 6159700 15954 1275 6036 6176 24862 24862 IAVYHLQELASAELAK 16 1 0 Unmodified _IAVYHLQELASAELAK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.33 3 585.992838 1754.95669 79011.29 0.76079 0.00044582 0.34599 0.00020275 1.1068 0.00064857 585.992800035936 588.664180762505 110.74 0.83261 110.74 110.44 111.27 -7.6294E-06 166 37 10 0 0 0 6.4042E-07 2 64012 93.51 93.51 1 0.78656 0.60916 0 13063000 7407200 5655400 15955 1275 6036 6176 24863;24864 24863 IAVYHLQELASAELAK 16 1 0 Unmodified _IAVYHLQELASAELAK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.3286 3 585.992838 1754.95669 79522.88 0.6492 0.00038043 -0.052167 -3.0569E-05 0.59703 0.00034986 585.992744802826 588.664033409625 110.53 0.53899 110.53 110.31 110.85 0 176 28 9 0 0 0 0.00021168 2 62869 48.405 48.405 1 0.72803 0.60187 0 11839000 6973800 4864700 15956 1275 6036 6176 24865;24866 24865 IAWPPPTELGSSGSALEEGIK 21 1 0 Unmodified _IAWPPPTELGSSGSALEEGIK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1074.5626 2 1070.05205 2138.08955 NaN NaN NaN 0.32639 0.00034925 NaN NaN NaN NaN 123.47 0.56303 123.47 123.13 123.69 0 0 0 0 3.7709E-06 1 73785 62.357 42.753 1 NaN NaN 0 14759000 0 14759000 15957 1010 6037 6177 24867 24867 IAWPPPTELGSSGSALEEGIK 21 1 0 Unmodified _IAWPPPTELGSSGSALEEGIK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1074.0601 2 1070.05205 2138.08955 NaN NaN NaN 0.35204 0.00037671 NaN NaN NaN NaN 123.27 0.59065 123.27 123.05 123.64 0 0 0 0 0.00039191 1 72745 48.177 35.795 1 NaN NaN 0 17724000 0 17724000 15958 1010 6037 6177 24868 24868 IAYQLAVEAESEQK 14 1 0 Unmodified _IAYQLAVEAESEQK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.9042 2 789.904128 1577.7937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.009 1 74.009 73.509 74.509 0 0 0 0 0.0012763 1 43412 74.611 51.871 1 15959 1545 6038 6178 24869 24869 IAYQLAVEAESEQK 14 1 0 Unmodified _IAYQLAVEAESEQK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.9114 2 789.904128 1577.7937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.167 1 74.167 73.667 74.667 0 0 0 0 0.0027298 1 43506 60.255 44.002 1 15960 1545 6038 6178 24870 24870 IAYQLAVEAESEQK 14 1 0 Unmodified _IAYQLAVEAESEQK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.9053 2 789.904128 1577.7937 69859.64 0.76422 0.00060366 -0.18584 -0.0001468 0.57837 0.00045686 789.903992583783 793.911062361498 72.754 0.41152 72.754 72.567 72.978 0 105 34 4 0 0 0 1.8049E-05 2 43627 97.957 97.957 1 1.6749 1.6756 0 15461000 6782000 8679300 15961 1545 6038 6178 24871;24872 24871 IAYQLAVEAESEQK 14 1 0 Unmodified _IAYQLAVEAESEQK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.9119 2 789.904128 1577.7937 69328.3 0.5626 0.0004444 0.0015302 1.2087E-06 0.56413 0.00044561 789.904224380316 793.910978931678 84.683 0.45297 84.683 84.48 84.933 0 111 33 5 0 0 0 0.0088554 2 46202 37.995 37.995 1 0.98032 0.8143 0 2278100 1130400 1147600 15962 1545 6038 6178 24873;24874 24873 IAYQLAVEAESEQK 14 1 0 Unmodified _IAYQLAVEAESEQK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.9063 2 789.904128 1577.7937 68456.11 0.78827 0.00062265 -1.0661 -0.00084214 -0.27787 -0.00021949 790.405140656591 794.912026656356 84.821 0.52338 84.821 84.607 85.13 -7.6294E-06 185 36 7 0 0 0 0.045486 1 45552 26.753 23.432 1 1.358 1.1035 0 1901000 896080 1004900 15963 1545 6038 6178 24875 24875 ICDECNYGSYQGR 13 0 1 Unmodified _ICDECNYGSYQGR_ 0 0 0 A0A024R1U2;Q7RTV0 A0A024R1U2 A0A024R1U2 PHF5A PHD finger-like domain-containing protein 5A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.327 2 811.322122 1620.62969 NaN NaN NaN -0.95826 -0.00077746 NaN NaN NaN NaN 31.702 0.30354 31.702 31.586 31.89 0 0 0 0 0.0041613 1 15630 62.466 52.234 1 NaN NaN 0 4251000 0 4251000 15964 91 6039 6179 24876 24876 ICDECNYGSYQGR 13 0 1 Unmodified _ICDECNYGSYQGR_ 0 0 0 A0A024R1U2;Q7RTV0 A0A024R1U2 A0A024R1U2 PHF5A PHD finger-like domain-containing protein 5A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.3218 2 811.322122 1620.62969 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.782 1 31.782 31.282 32.282 0 0 0 0 4.0124E-05 1 15703 94.465 88.225 1 15965 91 6039 6179 24877 24877 ICDECNYGSYQGR 13 0 1 Unmodified _ICDECNYGSYQGR_ 0 0 0 A0A024R1U2;Q7RTV0 A0A024R1U2 A0A024R1U2 PHF5A PHD finger-like domain-containing protein 5A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.3263 2 811.322122 1620.62969 71819.41 0.45424 0.00036854 -0.6882 -0.00055835 -0.23396 -0.00018981 811.321802761695 816.325441205213 31.169 0.29735 31.169 30.988 31.286 1.9073E-06 62 25 5 0 0 0 0.00019093 2 15323 70.942 70.942 1 1.3183 1.33 0 6051800 2699800 3352000 15966 91 6039 6179 24878;24879 24878 ICDETANATSTLK 13 1 0 Unmodified _ICDETANATSTLK_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.3483 2 712.340306 1422.66606 73187.47 0.68912 0.00049089 -1.5809 -0.0011262 -0.89183 -0.00063528 712.841511934791 716.345580589652 37.779 0.769 37.779 37.449 38.218 3.8147E-06 176 64 6 0 0 0 0.02108 1 19313 35.523 31.057 1 1.565 1.5944 0 13256000 5984500 7271500 15967 247 6040 6180 24880 24880 ICDETANATSTLK 13 1 0 Unmodified _ICDETANATSTLK_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.3416 2 712.340306 1422.66606 72711.19 0.66556 0.0004741 -0.028019 -1.9959E-05 0.63754 0.00045414 712.340387174431 716.347673003297 43.616 0.68312 43.616 43.22 43.903 0 191 46 7 0 0 0 0.011284 1 20561 40.725 27.371 1 1.8788 1.4881 0 4913200 1892000 3021300 15968 247 6040 6180 24881 24881 ICDETANATSTLK 13 1 0 Unmodified _ICDETANATSTLK_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 716.3477 2 712.340306 1422.66606 72102.9 0.56004 0.00039894 -0.18399 -0.00013106 0.37605 0.00026788 712.34028612601 716.347419320158 43.843 0.61426 43.843 43.49 44.104 0 189 40 8 0 0 0 0.00011522 2 20169 91.313 52.291 1 1.9947 1.6204 0 4463700 1651200 2812500 15969 247 6040 6180 24882;24883 24883 ICDGVQFGAGIR 12 0 1 Unmodified _ICDGVQFGAGIR_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8287 2 646.824429 1291.63431 78280.67 0.81879 0.00052962 -0.93466 -0.00060456 -0.11587 -7.4944E-05 646.824408415844 651.827534650424 73.734 0.59929 73.734 73.388 73.987 0 130 56 4 0 0 0 0.00018029 1 43149 91.087 72.648 1 0.82879 0.83469 0 15741000 6562600 9178700 15970 2147 6041 6181 24884 24884 ICDGVQFGAGIR 12 0 1 Unmodified _ICDGVQFGAGIR_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.8257 2 646.824429 1291.63431 NaN NaN NaN 0.29256 0.00018923 NaN NaN NaN NaN 72.562 0.54882 72.562 72.238 72.787 0 0 0 0 0.00035879 2 43447 111.46 92.675 1 NaN NaN 0 8370700 8370700 0 15971 2147 6041 6181 24885;24886 24885 ICDQISDAVLDAHLQQDPDAK 21 1 0 Unmodified _ICDQISDAVLDAHLQQDPDAK_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.7158 3 784.709389 2351.10634 70222.11 0.55084 0.00043225 -0.039969 -3.1364E-05 0.51087 0.00040089 785.043802930922 787.715052462406 88.291 0.58765 88.291 88.078 88.665 0 249 44 8 0 0 0 4.9789E-12 3 53202 84.573 80.91 1 1.875 2.038 0 47311000 18237000 29074000 15972 606 6042 6182 24887;24888;24889 24887 ICDQISDAVLDAHLQQDPDAK 21 1 0 Unmodified _ICDQISDAVLDAHLQQDPDAK_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.7157 3 784.709389 2351.10634 69492.81 0.64521 0.0005063 0.040366 3.1676E-05 0.68557 0.00053798 785.043805040022 787.715119299623 87.486 0.68212 87.486 87.222 87.904 0 266 52 7 0 0 0 5.7703E-09 4 53857 67.785 64.19 1 1.8661 2.0447 0 40882000 15514000 25369000 15973 606 6042 6182 24890;24891;24892;24893 24891 ICDQISDAVLDAHLQQDPDAK 21 1 0 Unmodified _ICDQISDAVLDAHLQQDPDAK_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.7101 3 784.709389 2351.10634 69266.22 0.47074 0.00036939 0.24062 0.00018882 0.71136 0.00055821 784.709690334919 787.71557548655 101.36 0.54707 101.36 101.14 101.68 -7.6294E-06 240 37 10 0 0 0 2.0062E-07 1 57383 45.363 41.381 1 1.2651 1.0103 0 9182700 4541700 4641000 15974 606 6042 6182 24894 24894 ICDQISDAVLDAHLQQDPDAK 21 1 0 Unmodified _ICDQISDAVLDAHLQQDPDAK_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 785.0448 3 784.709389 2351.10634 69928.8 0.51624 0.0004051 0.34807 0.00027313 0.86431 0.00067823 785.04411209629 787.715525571144 101.26 0.51385 101.26 101 101.51 0 216 30 10 0 0 0 0.0011169 1 56477 35.091 32.405 1 1.5299 1.2578 0 9886300 4674600 5211700 15975 606 6042 6182 24895 24895 ICDVYNAVMDVVK 13 1 0 Oxidation (M) _ICDVYNAVM(ox)DVVK_ ICDVYNAVM(1)DVVK ICDVYNAVM(60.26)DVVK 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.3778 2 771.370552 1540.72655 NaN NaN NaN 0.73141 0.00056419 NaN NaN NaN NaN 98.888 0.58399 98.888 98.496 99.08 0 0 0 0 0.0014803 1 60363 60.255 44.684 1 NaN NaN 0 6032400 0 6032400 15976 2148 6043 6183 24896 24896 1992 ICDVYNAVMDVVK 13 1 0 Oxidation (M) _ICDVYNAVM(ox)DVVK_ ICDVYNAVM(1)DVVK ICDVYNAVM(61.82)DVVK 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.3804 2 771.370552 1540.72655 69437.95 0.74724 0.0005764 -1.1727 -0.0009046 -0.42547 -0.0003282 771.367408483213 775.378337073106 98.169 0.5732 98.169 97.852 98.425 7.6294E-06 158 51 4 0 0 0 0.00022242 1 61263 61.815 49.2 1 0.48985 0.49829 0 30382000 17142000 13240000 15977 2148 6043 6183 24897 24897 1992 ICDVYNAVMDVVK 13 1 0 Unmodified _ICDVYNAVMDVVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.3812 2 763.373094 1524.73164 69433.18 0.75742 0.00057819 -0.31551 -0.00024085 0.4419 0.00033734 763.373335689509 767.380173876944 124.91 0.51156 124.91 124.68 125.19 0 118 23 8 0 0 0 0.00011402 2 74879 87.363 80.979 1 0.97621 0.77742 0 6734300 2844200 3890100 15978 2148 6043 6184 24898;24899 24898 ICDVYNAVMDVVK 13 1 0 Unmodified _ICDVYNAVMDVVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.3734 2 763.373094 1524.73164 70114.14 0.88167 0.00067305 -0.029769 -2.2725E-05 0.8519 0.00065032 763.37327752786 767.380283571659 124.77 0.48238 124.77 124.55 125.03 7.6294E-06 127 23 8 0 0 0 0.0048366 2 73876 50.207 48.004 1 1.0067 0.82386 0 8449600 4133700 4315900 15979 2148 6043 6184 24900;24901 24901 ICDYLFNVSDSSALNLAK 18 1 0 Unmodified _ICDYLFNVSDSSALNLAK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1020.0033 2 1015.4986 2028.98264 NaN NaN NaN 0.37613 0.00038196 NaN NaN NaN NaN 117.64 0.33525 117.64 117.41 117.74 0 0 0 0 0.018378 1 75334 38.799 28.747 1 NaN NaN 0 4660600 0 4660600 15980 5 6044 6185 24902 24902 ICDYLFNVSDSSALNLAK 18 1 0 Unmodified _ICDYLFNVSDSSALNLAK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1020.009 2 1015.4986 2028.98264 NaN NaN NaN 0.054001 5.4838E-05 NaN NaN NaN NaN 117.16 0.31245 117.16 117.02 117.33 -7.6294E-06 0 0 0 0.0011162 2 76857 54.343 40.437 1 NaN NaN 0 4003400 0 4003400 15981 5 6044 6185 24903;24904 24903 ICEEETGSTSIQAADSTAVNGSITPTDKK 29 2 0 Unmodified _ICEEETGSTSIQAADSTAVNGSITPTDKK_ 0 0 1 D3DUE7;Q49A26;K7EPU6 D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1009.8194 3 1004.14343 3009.40845 60189.82 0.076555 7.6872E-05 -1.1408 -0.0011456 -1.0643 -0.0010687 1004.4778516564 1009.82006515007 76.151 0.42834 76.151 75.947 76.376 0 146 27 9 0 0 0 0.060709 1 39676 5.5436 5.5436 1 2.1692 1.8709 0 3110800 1040100 2070800 15982 1194 6045 6186 24905 24905 ICEILQAEK 9 1 0 Unmodified _ICEILQAEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.2985 2 552.291899 1102.56925 NaN NaN NaN -2.4404 -0.0013478 NaN NaN NaN NaN 51.997 0.13609 51.997 51.887 52.023 0 0 0 0 0.027774 1 28823 54.191 30.236 1 NaN NaN 0 4553800 0 4553800 15983 1581 6046 6187 24906 24906 ICEVRPCGQPVYSSLK 16 1 1 Unmodified _ICEVRPCGQPVYSSLK_ 0 0 1 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.6503 3 631.650089 1891.92844 75404.91 0.62207 0.00039293 -0.90373 -0.00057084 -0.28166 -0.00017791 632.315074073084 637.65761063575 56.46 0.95455 56.46 56.152 57.106 3.8147E-06 382 87 7 0 0 0 7.1526E-05 2 31873 71.354 53.725 1 2.2601 2.6806 0 42415000 12902000 29512000 15984 979 6047 6188 24907;24908 24908 ICEVRPCGQPVYSSLK 16 1 1 Unmodified _ICEVRPCGQPVYSSLK_ 0 0 1 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.992 3 631.650089 1891.92844 75943.13 0.48945 0.00030916 -0.52877 -0.000334 -0.039324 -2.4839E-05 631.649815662936 637.657489942162 55.048 0.67738 55.048 54.765 55.442 -3.8147E-06 310 52 8 0 0 0 7.0436E-05 2 31460 53.395 42.54 1 2.3438 2.7318 0 44269000 11245000 33024000 15985 979 6047 6188 24909;24910 24909 ICEVRPCGQPVYSSLK 16 1 1 Unmodified _ICEVRPCGQPVYSSLK_ 0 0 1 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.6573 3 631.650089 1891.92844 74713.91 0.69178 0.00043696 -0.38475 -0.00024302 0.30703 0.00019394 631.984225006497 637.657542085658 65.919 0.731 65.919 65.646 66.377 0 342 48 10 0 0 0 0.040298 1 34011 20.65 20.65 1 1.0951 0.94944 0 16526000 7929100 8596800 15986 979 6047 6188 24911 24911 ICEVRPCGQPVYSSLK 16 1 1 Unmodified _ICEVRPCGQPVYSSLK_ 0 0 1 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.6579 3 631.650089 1891.92844 75360.98 0.49884 0.0003151 -0.34004 -0.00021479 0.1588 0.00010031 631.984221373764 637.6576545003 66.336 0.80776 66.336 66.076 66.883 0 341 54 10 0 0 0 0.0054705 2 33512 25.198 16.266 1 1.1415 0.96668 0 13706000 6163200 7542500 15987 979 6047 6188 24912;24913 24912 ICGDIHGQYTDLLR 14 0 1 Unmodified _ICGDIHGQYTDLLR_ 0 0 0 V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.6113 3 554.27524 1659.80389 79681.31 0.65631 0.00036377 -0.28458 -0.00015773 0.37173 0.00020604 554.275947197358 557.611067582049 76.277 0.9206 76.277 75.884 76.805 0 401 75 9 0 0 0 0.00063255 1 44902 49.482 49.482 1 1.0611 1.1789 0 72606000 33762000 38844000 15988 1633 6048 6189 24914 24914 ICGDIHGQYTDLLR 14 0 1 Unmodified _ICGDIHGQYTDLLR_ 0 0 0 V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.6108 3 554.27524 1659.80389 79601.44 0.34992 0.00019395 -0.57197 -0.00031703 -0.22206 -0.00012308 554.275092543149 557.611133018999 74.894 0.77458 74.894 74.628 75.402 0 423 69 9 0 0 0 3.7919E-05 2 45008 81.311 81.311 1 1.0296 1.1748 0 93762000 48505000 45257000 15989 1633 6048 6189 24915;24916 24915 ICGDIHGQYTDLLR 14 0 1 Unmodified _ICGDIHGQYTDLLR_ 0 0 0 V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.6117 3 554.27524 1659.80389 79078.42 0.3334 0.0001848 0.062288 3.4525E-05 0.39569 0.00021932 554.275557191147 557.611418660514 87.082 0.89067 87.082 86.777 87.668 0 254 51 10 0 0 0 0.0015778 2 47779 44.294 44.294 1 1.9461 1.664 0 39185000 12192000 26993000 15990 1633 6048 6189 24917;24918 24917 ICGDIHGQYTDLLR 14 0 1 Unmodified _ICGDIHGQYTDLLR_ 0 0 0 V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.2751 3 554.27524 1659.80389 79354.67 0.5546 0.0003074 -0.32774 -0.00018166 0.22686 0.00012574 554.275344786956 557.611271500858 87.102 1.042 87.102 86.826 87.868 0 338 61 11 0 0 0 0.00050443 2 46952 52.254 52.254 1 2.0299 1.7707 0 29739000 10110000 19630000 15991 1633 6048 6189 24919;24920 24919 ICGDIHGQYYDLLR 14 0 1 Unmodified _ICGDIHGQYYDLLR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5 P62136;A0A024RBP2 P62136 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.2836 3 574.947123 1721.81954 78586.44 0.58789 0.00033801 0.2031 0.00011677 0.791 0.00045478 574.94727053439 578.283269740755 83.188 0.96291 83.188 82.802 83.765 0 534 81 9 0 0 0 8.4327E-10 2 49798 101.2 101.2 1 1.3889 1.5386 0 63509000 27449000 36060000 15992 1632;343 6049 6190 24921;24922 24922 ICGDIHGQYYDLLR 14 0 1 Unmodified _ICGDIHGQYYDLLR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5 P62136;A0A024RBP2 P62136 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.9475 3 574.947123 1721.81954 77979.65 0.79384 0.00045642 -0.069027 -3.9687E-05 0.72481 0.00041673 574.947084766696 578.283040599261 81.861 0.87697 81.861 81.402 82.279 0 419 74 9 0 0 0 7.4384E-05 1 49878 67.964 67.964 1 1.2815 1.4578 0 116480000 50468000 66016000 15993 1632;343 6049 6190 24923 24923 ICGDIHGQYYDLLR 14 0 1 Unmodified _ICGDIHGQYYDLLR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5 P62136;A0A024RBP2 P62136 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.6192 3 574.947123 1721.81954 NaN NaN NaN -0.47288 -0.00027188 NaN NaN NaN NaN 81.733 0.37401 81.733 81.413 81.787 0 0 0 0 0.00095241 1 49824 63.128 50.963 1 NaN NaN 0 68061000 0 68061000 15994 1632;343 6049 6190 24924 24924 ICGDIHGQYYDLLR 14 0 1 Unmodified _ICGDIHGQYYDLLR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5 P62136;A0A024RBP2 P62136 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 578.2828 3 574.947123 1721.81954 79759.57 0.59227 0.00034052 -0.025357 -1.4579E-05 0.56691 0.00032594 574.947333904863 578.283284000648 94.773 0.79614 94.773 94.436 95.232 0 372 53 10 0 0 0 7.1719E-05 2 52941 49.188 49.188 1 2.5532 2.1729 0 35257000 9109000 26148000 15995 1632;343 6049 6190 24925;24926 24925 ICGDIHGQYYDLLR 14 0 1 Unmodified _ICGDIHGQYYDLLR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5 P62136;A0A024RBP2 P62136 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.2832 3 574.947123 1721.81954 79019.66 0.52527 0.000302 -0.29004 -0.00016676 0.23523 0.00013524 575.281476275438 578.283149070991 94.655 0.76457 94.655 94.318 95.083 0 320 47 10 0 0 0 7.1913E-05 2 52014 53.403 53.403 1 2.5576 2.231 0 27988000 8400600 19588000 15996 1632;343 6049 6190 24927;24928 24927 ICIIWDLQSCQATR 14 0 1 Unmodified _ICIIWDLQSCQATR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.4583 2 882.432006 1762.84946 NaN NaN NaN 0.4812 0.00042463 NaN NaN NaN NaN 108.54 0.22926 108.54 108.4 108.63 0 0 0 0 0.0053693 2 69377 55.401 37.592 1 NaN NaN 0 3794300 3794300 0 15997 1698;436 6050 6191 24929;24930 24929 ICIIWDLQSCQATR 14 0 1 Unmodified _ICIIWDLQSCQATR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 882.9341 2 882.432006 1762.84946 64659.6 0.48591 0.00042878 0.12815 0.00011308 0.61406 0.00054186 882.934190622912 887.436050579139 120.18 0.4743 120.18 119.97 120.44 0 86 20 8 0 0 0 0.00024168 2 71268 63.408 63.408 1 0.9975 0.85804 0 6932200 3061300 3870900 15998 1698;436 6050 6191 24931;24932 24932 ICIIWDLQSCQATR 14 0 1 Unmodified _ICIIWDLQSCQATR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 882.4326 2 882.432006 1762.84946 64719.33 0.4365 0.00038518 0.036376 3.21E-05 0.47287 0.00041728 882.43212855189 887.43616552419 119.91 0.30573 119.91 119.79 120.1 7.6294E-06 64 11 8 0 0 0 0.00020231 1 70229 69.01 63.038 1 1.391 1.1541 0 5631200 2762200 2869100 15999 1698;436 6050 6191 24933 24933 ICLQPPPTSR 10 0 1 Unmodified _ICLQPPPTSR_ 0 0 0 A0A024RCN6;P26640;A0A140T954;A2ABF4;A0A0G2JJT9 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.3146 2 584.81079 1167.60703 83613.09 0.44166 0.00025829 -0.38132 -0.000223 0.060346 3.5291E-05 584.810942232329 589.814374723672 54.01 0.73416 54.01 53.582 54.316 -3.8147E-06 108 58 4 0 0 0 0.0012959 2 30344 74.301 74.301 1 1.2517 1.2676 0 17998000 8200300 9797600 16000 363 6051 6192 24934;24935 24935 ICLQPPPTSR 10 0 1 Unmodified _ICLQPPPTSR_ 0 0 0 A0A024RCN6;P26640;A0A140T954;A2ABF4;A0A0G2JJT9 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8121 2 584.81079 1167.60703 NaN NaN NaN 1.1092 0.00064869 NaN NaN NaN NaN 52.739 0.44004 52.739 52.597 53.037 -3.8147E-06 0 0 0 0.020144 1 30115 69.716 47.585 1 NaN NaN 0 5312600 5312600 0 16001 363 6051 6192 24936 24936 ICNEILTSPCSPEIR 15 0 1 Unmodified _ICNEILTSPCSPEIR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.4372 2 894.934579 1787.8546 64040.72 0.80485 0.00072029 -0.1551 -0.00013881 0.64974 0.00058148 894.934710768915 899.938870628345 82.964 0.60609 82.964 82.717 83.323 0 351 52 8 0 0 0 2.9086E-15 2 49509 131.17 114.92 1 0.72315 0.80284 0 70152000 38262000 31890000 16002 1995 6052 6193 24937;24938 24938 ICNEILTSPCSPEIR 15 0 1 Unmodified _ICNEILTSPCSPEIR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.9352 2 894.934579 1787.8546 63833 0.53381 0.00047772 -0.25824 -0.00023111 0.27557 0.00024662 894.934701744931 899.939084099703 82.034 0.59792 82.034 81.736 82.334 0 387 53 10 0 0 0 4.6265E-15 2 50031 127.17 113.02 1 0.70891 0.80925 0 92262000 47874000 44388000 16003 1995 6052 6193 24939;24940 24940 ICNEILTSPCSPEIR 15 0 1 Unmodified _ICNEILTSPCSPEIR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 899.9372 2 894.934579 1787.8546 62844.01 0.57049 0.00051055 -0.45121 -0.0004038 0.11929 0.00010675 895.436120735103 899.938668277981 95.141 1.0885 95.141 94.833 95.922 -7.6294E-06 458 77 12 0 0 0 0.022072 2 53132 30.438 25.542 1 1.552 1.3352 0 50293000 19524000 30768000 16004 1995 6052 6193 24941;24942 24941 ICNEILTSPCSPEIR 15 0 1 Unmodified _ICNEILTSPCSPEIR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 899.9395 2 894.934579 1787.8546 63306.69 0.20416 0.00018271 0.09097 8.1412E-05 0.29513 0.00026412 894.935236400663 899.939141560597 95.076 0.69397 95.076 94.751 95.445 -7.6294E-06 380 47 11 0 0 0 7.6893E-08 2 52343 111.12 61.015 1 1.5349 1.3391 0 48402000 19988000 28415000 16005 1995 6052 6193 24943;24944 24944 ICNYEGPAK 9 1 0 Unmodified _ICNYEGPAK_ 0 0 0 Q00653;A0A1P8C958;D3DR86 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2552 2 526.247492 1050.48043 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.978 1 21.978 21.478 22.478 1.9073E-06 0 0 0 0.0093753 1 8151 64.265 33.035 1 16006 1674 6053 6194 24945 24945 ICPVEFNPNFVAR 13 0 1 Unmodified _ICPVEFNPNFVAR_ 0 0 0 F5GX77;A0A024R565;Q9UI30 F5GX77 F5GX77 TRMT112;HSPC152 Multifunctional methyltransferase subunit TRM112-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.8925 2 781.892843 1561.77113 70103.13 0.98186 0.00076771 -0.71478 -0.00055888 0.26708 0.00020883 781.892404777424 786.896446250721 101.93 0.79068 101.93 101.53 102.32 0 201 62 6 0 0 0 0.0085865 1 62651 43.77 26.334 1 1.353 1.4223 0 11263000 4882800 6380700 16007 170 6054 6195 24946 24946 ICPVEFNPNFVAR 13 0 1 Unmodified _ICPVEFNPNFVAR_ 0 0 0 F5GX77;A0A024R565;Q9UI30 F5GX77 F5GX77 TRMT112;HSPC152 Multifunctional methyltransferase subunit TRM112-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.3983 2 781.892843 1561.77113 70599.91 0.67136 0.00052493 -0.29273 -0.00022888 0.37863 0.00029605 782.39394463687 786.896954508733 101.12 0.57941 101.12 100.85 101.43 0 190 44 6 0 0 0 0.0036439 2 63572 49.35 32.719 1 1.4208 1.4299 0 19363000 7343300 12020000 16008 170 6054 6195 24947;24948 24948 ICQADIVEAVDIASAAK 17 1 0 Unmodified _ICQADIVEAVDIASAAK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.457 2 887.456201 1772.89785 64493.92 0.9124 0.00080972 -0.80561 -0.00071494 0.10679 9.4772E-05 887.455793323969 891.463530008718 111.76 0.67616 111.76 111.56 112.24 0 246 48 7 0 0 0 5.2871E-18 1 70505 130.2 113.57 1 0.80382 0.87117 0 44305000 23524000 20781000 16009 809 6055 6196 24949 24949 ICQADIVEAVDIASAAK 17 1 0 Unmodified _ICQADIVEAVDIASAAK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.9586 2 887.456201 1772.89785 64543.84 0.5662 0.00050248 -0.64821 -0.00057526 -0.082013 -7.2783E-05 887.455892782526 891.964186274591 111.31 0.5779 111.31 111.04 111.62 -7.6294E-06 219 38 7 0 0 0 4.1233E-05 1 71767 79.466 70.278 1 0.76487 0.7825 0 31676000 17648000 14028000 16010 809 6055 6196 24950 24950 ICRDPQTPVLQTK 13 1 1 Unmodified _ICRDPQTPVLQTK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.4188 2 778.416682 1554.81881 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.897 1 35.897 35.397 36.397 0 0 0 0 9.6693E-10 1 18361 107.97 72.455 1 16011 1837 6056 6197 24951 24951 ICRDPQTPVLQTK 13 1 1 Unmodified _ICRDPQTPVLQTK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 519.2803 3 519.280214 1554.81881 NaN NaN NaN -0.3323 -0.00017256 NaN NaN NaN NaN 42.348 0.60685 42.348 42.072 42.679 0 0 0 0 0.0013971 1 19732 61.409 53.233 1 NaN NaN 0 5368000 5368000 0 16012 1837 6056 6197 24952 24952 ICRDPQTPVLQTK 13 1 1 Unmodified _ICRDPQTPVLQTK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.2802 3 519.280214 1554.81881 81095.49 -0.015633 -8.118E-06 0.1202 6.2416E-05 0.10456 5.4298E-05 519.614750497331 525.28779983699 42.39 0.63705 42.39 42.08 42.717 0 257 45 8 0 0 0 0.0002551 1 19274 58.831 58.831 1 1.2928 1.0935 0 10754000 5018700 5735500 16013 1837 6056 6197 24953 24953 ICTICNELFPENVYSVHFEK 20 1 0 Unmodified _ICTICNELFPENVYSVHFEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 836.7341 3 833.727615 2498.16102 64432.55 0.7516 0.00062663 0.083471 6.9592E-05 0.83507 0.00069622 834.062778189387 836.39951152181 122.01 0.56371 122.01 121.69 122.25 0 148 26 11 0 0 0 0.052661 1 72759 10.554 10.554 1 1.6718 1.2948 0 13169000 5530900 7638000 16014 878 6057 6198 24954 24954 ICTICNELFPENVYSVHFEK 20 1 0 Unmodified _ICTICNELFPENVYSVHFEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 836.7342 3 833.727615 2498.16102 64650.32 0.92102 0.00076788 -0.13265 -0.0001106 0.78837 0.00065728 834.0623075687 836.733208615157 121.82 0.51822 121.82 121.47 121.99 -7.6294E-06 126 21 10 0 0 0 0.0022574 1 71682 24.875 24.875 1 1.7593 1.4111 0 18883000 7096500 11786000 16015 878 6057 6198 24955 24955 ICYQEVSQCFGVLSSR 16 0 1 Unmodified _ICYQEVSQCFGVLSSR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 971.96 2 966.95076 1931.88697 61939.63 0.3417 0.00033041 -0.24197 -0.00023397 0.099737 9.644E-05 967.451873559439 971.954648938769 102.28 0.66099 102.28 101.99 102.65 7.6294E-06 213 53 6 0 0 0 0.0010435 2 62813 46.88 41.377 1 0.5883 0.60589 0 19737000 11794000 7943200 16016 1770 6058 6199 24956;24957 24957 ICYQEVSQCFGVLSSR 16 0 1 Unmodified _ICYQEVSQCFGVLSSR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 971.9553 2 966.95076 1931.88697 62209.33 0.37352 0.00036118 -0.27775 -0.00026857 0.095776 9.2611E-05 967.45205336048 972.456168256086 101.65 0.55913 101.65 101.38 101.94 0 211 44 7 0 0 0 0.00012742 2 63952 77.204 69.48 1 0.57143 0.57242 0 18855000 11713000 7142500 16017 1770 6058 6199 24958;24959 24959 ICYQEVSQCFGVLSSR 16 0 1 Unmodified _ICYQEVSQCFGVLSSR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.9498 2 966.95076 1931.88697 61399.68 0.33614 0.00032503 -0.91268 -0.00088252 -0.57654 -0.00055749 966.95131631839 972.455232863993 114.42 0.65811 114.42 114.21 114.86 7.6294E-06 153 28 11 0 0 0 0.00015182 1 66759 64.394 51.626 1 0.83821 0.69136 0 11591000 7749800 3841100 16018 1770 6058 6199 24960 24960 IDAELVLPTIR 11 0 1 Unmodified _IDAELVLPTIR_ 0 0 0 B3KU89;H0Y6W0;A8K4N2;A0A024R1C2;O95985 B3KU89 B3KU89 TOP3B DNA topoisomerase;DNA topoisomerase 3-beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.371 2 620.368995 1238.72344 84965.22 1.2482 0.00077432 0.82044 0.00050898 2.0686 0.0012833 620.369296366934 625.373494621242 111.51 0.27689 111.51 111.42 111.69 0 49 19 4 0 0 0 0.00071156 1 70236 73.067 62.543 1 1.6096 1.6086 0 16519000 7128400 9390200 16019 75 6059 6200 24961 24961 IDAELVLPTIR 11 0 1 Unmodified _IDAELVLPTIR_ 0 0 0 B3KU89;H0Y6W0;A8K4N2;A0A024R1C2;O95985 B3KU89 B3KU89 TOP3B DNA topoisomerase;DNA topoisomerase 3-beta-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.3736 2 620.368995 1238.72344 NaN NaN NaN -0.070911 -4.3991E-05 NaN NaN NaN NaN 110.95 0.26331 110.95 110.84 111.1 0 0 0 0 0.036416 1 71579 48.284 32.081 1 NaN NaN 0 1775400 0 1775400 16020 75 6059 6200 24962 24962 IDASELSFPFHESILK 16 1 0 Unmodified _IDASELSFPFHESILK_ 0 0 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.9866 3 611.652482 1831.93562 77613.74 0.48527 0.00029681 0.075602 4.6242E-05 0.56087 0.00034306 611.652349579185 614.658444173723 114.07 0.45054 114.07 113.85 114.3 7.6294E-06 165 33 6 0 0 0 0.0068235 2 74063 30.961 30.961 1 1.4928 1.493 0 15406000 7104200 8301600 16021 1562 6060 6201 24963;24964 24964 IDCDNLEQYFIQQGGGPDK 19 1 0 Unmodified _IDCDNLEQYFIQQGGGPDK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1099.4971 2 1098.99695 2195.97935 NaN NaN NaN 0.92427 0.0010158 NaN NaN NaN NaN 105.51 0.23672 105.51 105.39 105.63 0 0 0 0 0.0020997 1 65339 49.31 43.925 1 NaN NaN 0 3663900 3663900 0 16022 452 6061 6202 24965 24965 IDCDNLEQYFIQQGGGPDK 19 1 0 Unmodified _IDCDNLEQYFIQQGGGPDK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1103.0021 2 1098.99695 2195.97935 61534.98 0.18792 0.00020652 0.35426 0.00038933 0.54218 0.00059585 1099.49863637694 1103.50658019939 105 0.39098 105 104.76 105.15 0 98 31 5 0 0 0 1.8747E-05 1 66574 62.891 57.714 1 1.1902 1.2342 0 9838800 4475500 5363400 16023 452 6061 6202 24966 24966 IDCFSEVPTSVFGEK 15 1 0 Unmodified _IDCFSEVPTSVFGEK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.9043 2 857.90327 1713.79199 65350.64 0.76883 0.00065959 -0.29733 -0.00025508 0.4715 0.0004045 858.404593832193 861.910399058032 105.64 0.86816 105.64 105.24 106.11 0 480 65 10 0 0 0 0.00049803 2 65269 56.205 56.205 1 0.7052 0.79609 0 136360000 77763000 58598000 16024 785 6062 6203 24967;24968 24968 IDCFSEVPTSVFGEK 15 1 0 Unmodified _IDCFSEVPTSVFGEK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.4129 2 857.90327 1713.79199 65191.96 0.82913 0.00071131 -0.11561 -9.9184E-05 0.71352 0.00061213 857.903318086078 861.910542092473 105.05 0.93046 105.05 104.65 105.58 0 552 69 12 0 0 0 0.00022595 2 66438 72.958 69.533 1 0.70589 0.80763 0 160580000 98143000 62433000 16025 785 6062 6203 24969;24970 24969 IDCFSEVPTSVFGEK 15 1 0 Unmodified _IDCFSEVPTSVFGEK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 858.4046 2 857.90327 1713.79199 63934.42 0.43437 0.00037265 -0.085941 -7.3729E-05 0.34843 0.00029892 857.903449074907 861.910529119772 116.92 1.1367 116.92 116.58 117.72 0 334 47 13 0 0 0 9.9467E-39 3 68709 171.32 165.72 1 0.98681 0.85967 0 155770000 78746000 77027000 16026 785 6062 6203 24971;24972;24973 24972 IDCFSEVPTSVFGEK 15 1 0 Unmodified _IDCFSEVPTSVFGEK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.4056 2 857.90327 1713.79199 64078.61 0.66944 0.00057432 -0.28544 -0.00024488 0.384 0.00032944 857.903290810599 861.910414817336 116.8 1.4605 116.8 116.38 117.84 7.6294E-06 385 67 12 0 0 0 1.0617E-10 2 67670 122.55 122.55 1 1.0075 0.8651 0 146680000 71987000 74693000 16027 785 6062 6203 24974;24975 24975 IDDIVSGHK 9 1 0 Unmodified _IDDIVSGHK_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.2683 2 492.261456 982.50836 NaN NaN NaN 0.25231 0.0001242 NaN NaN NaN NaN 24.193 0.41717 24.193 23.976 24.393 -1.9073E-06 0 0 0 0.029937 1 9944 53.493 26.007 1 NaN NaN 0 16425000 0 16425000 16028 951 6063 6204 24976 24976 IDDPIDEEEEFEELK 15 1 0 Unmodified _IDDPIDEEEEFEELK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.4147 2 925.414919 1848.81529 63298.99 0.64524 0.00059712 -0.3306 -0.00030594 0.31464 0.00029117 925.917217732557 929.923401458839 103.86 0.73595 103.86 103.42 104.15 -7.6294E-06 203 59 7 0 0 0 0.00053322 4 64126 55.452 55.452 1 0.78527 0.77009 0 8838400 4665800 4172600 16029 1942 6064 6205 24977;24978;24979;24980 24979 IDDPIDEEEEFEELK 15 1 0 Unmodified _IDDPIDEEEEFEELK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.9247 2 925.414919 1848.81529 NaN NaN NaN 0.3618 0.00033482 NaN NaN NaN NaN 103.34 0.58117 103.34 103.06 103.64 0 0 0 0 0.0037183 2 65307 59.57 45.412 1 NaN NaN 0 5737000 0 5737000 16030 1942 6064 6205 24981;24982 24982 IDDPIDEEEEFEELK 15 1 0 Unmodified _IDDPIDEEEEFEELK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.9155 2 925.414919 1848.81529 NaN NaN NaN -0.86194 -0.00079765 NaN NaN NaN NaN 103.36 0.61079 103.36 103.11 103.72 0 0 0 0 5.6836E-05 1 65363 95.094 85.905 1 NaN NaN 0 8362800 8362800 0 16031 1942 6064 6205 24983 24983 IDDSEVVDATMHGNAAR 17 0 1 Oxidation (M) _IDDSEVVDATM(ox)HGNAAR_ IDDSEVVDATM(1)HGNAAR IDDSEVVDATM(87.52)HGNAAR 0 1 0 Q03164;B4DIJ7 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180;Histone-lysine N-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.6132 3 606.275857 1815.80574 78506.83 0.96756 0.00058661 -0.41657 -0.00025255 0.55099 0.00033405 606.609791181382 609.611822884477 43.954 0.38707 43.954 43.764 44.151 0 128 33 6 0 0 0 3.4878E-07 1 23933 87.519 83.551 1 1.027 1.1167 0 28641000 11704000 16937000 16032 1680 6065 6206 24984 24984 1490 IDEAESLNDEELEEK 15 1 0 Unmodified _IDEAESLNDEELEEK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.9047 2 881.896893 1761.77923 64870.14 0.43463 0.0003833 0.17363 0.00015312 0.60826 0.00053642 881.897002520422 885.904027820397 62.644 1.1018 62.644 62.146 63.248 3.8147E-06 626 103 9 0 0 0 4.2726E-60 3 35746 201 201 1 2.498 2.8514 0 178380000 51552000 126830000 16033 1391 6066 6207 24985;24986;24987 24985 IDEAESLNDEELEEK 15 1 0 Unmodified _IDEAESLNDEELEEK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 881.8968 2 881.896893 1761.77923 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.138 1 63.138 62.638 63.638 3.8147E-06 0 0 0 0.0013518 1 36264 72.705 60.974 1 16034 1391 6066 6207 24988 24988 IDEAESLNDEELEEK 15 1 0 Unmodified _IDEAESLNDEELEEK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.0779 2 881.896893 1761.77923 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.265 1 63.265 62.765 63.765 0 0 0 0 0.0013747 1 36337 72.496 59.404 1 16035 1391 6066 6207 24989 24989 IDEAESLNDEELEEK 15 1 0 Unmodified _IDEAESLNDEELEEK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.8997 2 881.896893 1761.77923 64485.67 0.50822 0.00044819 0.28192 0.00024862 0.79013 0.00069682 881.897038039508 885.904191235641 61.807 1.1056 61.807 61.364 62.47 0 640 102 10 0 0 0 5.1334E-99 4 36061 230.59 230.59 1 2.3984 2.7989 0 267680000 74967000 192710000 16036 1391 6066 6207 24990;24991;24992;24993 24991 IDEAESLNDEELEEK 15 1 0 Unmodified _IDEAESLNDEELEEK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.8964 2 881.896893 1761.77923 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.32 1 62.32 61.82 62.82 0 0 0 0 0.011911 1 36553 45.891 34.632 1 16037 1391 6066 6207 24994 24994 IDEAESLNDEELEEK 15 1 0 Unmodified _IDEAESLNDEELEEK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 882.3987 2 881.896893 1761.77923 64545.76 0.46875 0.00041339 0.28949 0.0002553 0.75823 0.00066868 881.897063922729 885.904166131098 72.684 0.98874 72.684 72.37 73.359 0 474 69 10 0 0 0 5.2421E-31 4 38312 160.86 160.86 1 5.2978 4.5414 0 77199000 13191000 64008000 16038 1391 6066 6207 24995;24996;24997;24998 24997 IDEAESLNDEELEEK 15 1 0 Unmodified _IDEAESLNDEELEEK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 886.406 2 881.896893 1761.77923 64526.6 0.21793 0.00019219 0.19747 0.00017414 0.41539 0.00036633 881.897061598068 885.90416500059 73.379 1.8846 73.379 73 74.884 0 615 128 12 0 0 0 1.2794E-58 3 37919 198.55 198.55 1 5.4107 4.6059 0 84047000 12742000 71305000 16039 1391 6066 6207 24999;25000;25001 24999 IDEPLEGSEDR 11 0 1 Unmodified _IDEPLEGSEDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;B3KU16;S4R359 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.297 2 630.291139 1258.56773 76599.85 0.65416 0.00041231 0.01351 8.5151E-06 0.66767 0.00042083 630.291183931673 635.295294735425 39.062 0.59779 39.062 38.739 39.337 0 228 46 6 0 0 0 0.00040176 2 20024 81.338 81.338 1 1.5162 1.6785 0 61801000 25491000 36310000 16040 102 6067 6208 25002;25003 25002 IDEPLEGSEDR 11 0 1 Unmodified _IDEPLEGSEDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;B3KU16;S4R359 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.2934 2 630.291139 1258.56773 77321.19 0.37027 0.00023338 0.033105 2.0866E-05 0.40337 0.00025424 630.291193589137 635.295402218226 38.134 0.45661 38.134 37.908 38.364 0 192 35 7 0 0 0 8.4595E-06 2 19828 109.42 101.77 1 1.4389 1.6386 0 108120000 43577000 64543000 16041 102 6067 6208 25004;25005 25004 IDEPLEGSEDR 11 0 1 Unmodified _IDEPLEGSEDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;B3KU16;S4R359 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.2919 2 630.291139 1258.56773 76077.73 0.53922 0.00033987 -0.12041 -7.5894E-05 0.41881 0.00026397 630.290987884499 635.295135017756 44.477 0.61139 44.477 44.187 44.799 0 188 41 6 0 0 0 0.0082766 2 21134 51.092 43.524 1 1.1039 0.94353 0 5822100 2679300 3142800 16042 102 6067 6208 25006;25007 25007 IDEPLEGSEDR 11 0 1 Unmodified _IDEPLEGSEDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;B3KU16;S4R359 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.2957 2 630.291139 1258.56773 76923.89 0.82172 0.00051793 -0.33935 -0.00021389 0.48237 0.00030404 630.290937458032 635.294991858888 44.732 0.56717 44.732 44.425 44.992 0 206 42 6 0 0 0 0.0092202 1 20658 49.5 49.5 1 1.17 1.0347 0 4006900 1974900 2031900 16043 102 6067 6208 25008 25008 IDFYFDENPYFENK 14 1 0 Unmodified _IDFYFDENPYFENK_ 0 0 0 A0A0C4DFV9;B2RCX0;A0A024R895;Q5VXV3;A0A087X027;Q01105;P0DME0 A0A0C4DFV9 A0A0C4DFV9 SET;SETSIP Protein SET;Protein SETSIP MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 920.9059 2 920.906867 1839.79918 61257.43 0.70116 0.0006457 -0.087632 -8.0701E-05 0.61353 0.000565 921.407405922989 924.914286571955 125.34 0.48528 125.34 125.05 125.54 7.6294E-06 68 18 6 0 0 0 0.0011912 1 75196 55.452 46.723 1 0.50492 0.3922 0 3590700 2304900 1285700 16044 244 6068 6209 25009 25009 IDFYFDENPYFENK 14 1 0 Unmodified _IDFYFDENPYFENK_ 0 0 0 A0A0C4DFV9;B2RCX0;A0A024R895;Q5VXV3;A0A087X027;Q01105;P0DME0 A0A0C4DFV9 A0A0C4DFV9 SET;SETSIP Protein SET;Protein SETSIP MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 920.9069 2 920.906867 1839.79918 61756.84 0.61192 0.00056352 0.90478 0.00083322 1.5167 0.0013967 920.905950121037 924.913771992674 125.22 0.58233 125.22 125.01 125.59 0 122 24 10 0 0 0 0.035603 1 74247 29.544 20.355 1 0.49154 0.40306 0 5326900 3587200 1739800 16045 244 6068 6209 25010 25010 IDGGITGALR 10 0 1 Unmodified _IDGGITGALR_ 0 0 0 Q12873;B4DLC6;B4DKV1 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7771 2 486.777274 971.539994 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.287 1 59.287 58.787 59.787 3.8147E-06 0 0 0 0.0098377 1 33747 57.708 11.338 1 16046 1701 6069 6210 25011 25011 IDGGITGALR 10 0 1 Unmodified _IDGGITGALR_ 0 0 0 Q12873;B4DLC6;B4DKV1 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 491.7808 2 486.777274 971.539994 NaN NaN NaN 0.22527 0.00010966 NaN NaN NaN NaN 68.486 0.68372 68.486 68.164 68.848 0 0 0 0 0.034591 1 35851 50.805 25.91 1 NaN NaN 0 1302000 0 1302000 16047 1701 6069 6210 25012 25012 IDGGITGALR 10 0 1 Unmodified _IDGGITGALR_ 0 0 0 Q12873;B4DLC6;B4DKV1 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.7816 2 486.777274 971.539994 89989.57 0.22671 0.00011036 -0.10309 -5.0184E-05 0.12362 6.0176E-05 486.777167931873 491.781341566123 69.042 0.61895 69.042 68.663 69.281 0 141 44 4 0 0 0 0.034493 1 35241 40.994 24.85 1 1.5372 1.3557 0 1885300 731220 1154100 16048 1701 6069 6210 25013 25013 IDGGITGNMR 10 0 1 Oxidation (M) _IDGGITGNM(ox)R_ IDGGITGNM(1)R IDGGITGNM(85.68)R 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.2559 2 525.255848 1048.49714 82463.03 0.16 8.4042E-05 0.053798 2.8258E-05 0.2138 0.0001123 525.757919473455 530.259454643648 23.337 1.434 23.337 22.335 23.769 0 263 77 7 0 0 0 0.00024794 2 9199 85.676 50.38 1 0.61884 0.65983 0 43934000 27599000 16335000 16049 515 6070 6211 25014;25015 25015 375 IDGGITGNMR 10 0 1 Unmodified _IDGGITGNMR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.2585 2 517.258391 1032.50223 83357.63 0.41469 0.0002145 0.17 8.7936E-05 0.58469 0.00030244 517.258477817059 522.262495806241 44.355 0.50165 44.355 44.104 44.606 0 93 32 4 0 0 0 0.009241 2 20565 54.982 44.568 1 1.8831 1.6856 0 1981600 745470 1236100 16050 515 6070 6212 25016;25017 25017 IDGITIQAR 9 0 1 Unmodified _IDGITIQAR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.7889 2 493.785099 985.555644 92137.68 0.40382 0.0001994 -0.018537 -9.1533E-06 0.38528 0.00019025 493.785128397986 498.789163778501 60.136 0.37643 60.136 59.918 60.295 -3.8147E-06 92 32 4 0 0 0 0.0034791 1 34315 71.692 11.01 1 1.7134 1.7392 0 15065000 6331700 8733400 16051 523 6071 6213 25018 25018 IDGITIQAR 9 0 1 Unmodified _IDGITIQAR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.7891 2 493.785099 985.555644 89159.34 0.47559 0.00023484 0.20093 9.9216E-05 0.67652 0.00033405 493.78516401661 498.789268822691 58.999 0.32607 58.999 58.828 59.154 0 90 29 4 0 0 0 0.00068897 1 34301 95.741 39.195 1 1.6799 1.8098 0 25898000 11024000 14875000 16052 523 6071 6213 25019 25019 IDGLLIDQIQR 11 0 1 Unmodified _IDGLLIDQIQR_ 0 0 0 H7C5L9;G5E9W7;G5E9V5;P82650;Q59GX8 H7C5L9 H7C5L9 MRPS22 28S ribosomal protein S22, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.3694 2 642.369527 1282.7245 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.92 1 98.92 98.42 99.42 0 0 0 0 3.0215E-05 1 60513 87.913 40.716 1 16053 1277 6072 6214 25020 25020 IDGNLDYR 8 0 1 Unmodified _IDGNLDYR_ 0 0 0 A8K6X9;Q6PD62;H0YCE8 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.2422 2 483.237981 964.461409 87299.98 0.59046 0.00028533 -0.039371 -1.9026E-05 0.55109 0.00026631 483.23796967774 488.24221843313 36.581 0.60287 36.581 36.281 36.884 0 171 46 5 0 0 0 0.0082418 1 18835 79.474 41.236 1 1.5327 1.6759 0 35270000 11005000 24264000 16054 765 6073 6215 25021 25021 IDGNLVVRPYTPISSDDDK 19 1 1 Unmodified _IDGNLVVRPYTPISSDDDK_ 0 0 1 A0A024R4X0;P00387;B1AHF3;Q6ZVI6 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.0309 3 702.023414 2103.04841 72049.98 0.87592 0.00061492 -0.17273 -0.00012126 0.7032 0.00049366 702.357709332608 708.365636216405 81.886 0.63469 81.886 81.622 82.256 -7.6294E-06 307 54 9 0 0 0 1.0669E-30 2 48841 131.67 131.67 1 0.95587 1.1281 0 36464000 17060000 19404000 16055 164 6074 6216 25022;25023 25023 IDGNLVVRPYTPISSDDDK 19 1 1 Unmodified _IDGNLVVRPYTPISSDDDK_ 0 0 1 A0A024R4X0;P00387;B1AHF3;Q6ZVI6 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.0302 3 702.023414 2103.04841 71812.74 0.83247 0.00058441 0.078731 5.5271E-05 0.9112 0.00063968 702.358241396635 708.030716923891 80.751 0.66511 80.751 80.504 81.169 0 265 54 8 0 0 0 4.0116E-13 1 49241 106.73 106.73 1 1.0484 1.2236 0 46876000 21442000 25434000 16056 164 6074 6216 25024 25024 IDGNLVVRPYTPISSDDDK 19 1 1 Unmodified _IDGNLVVRPYTPISSDDDK_ 0 0 1 A0A024R4X0;P00387;B1AHF3;Q6ZVI6 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.0236 3 702.023414 2103.04841 72153.87 0.6672 0.00046839 0.40242 0.00028251 1.0696 0.0007509 702.358042404823 708.365457307027 93.303 0.60191 93.303 93.043 93.645 7.6294E-06 196 36 8 0 0 0 0.00019304 1 52059 41.711 41.711 1 0.73394 0.6062 0 5434100 3254300 2179900 16057 164 6074 6216 25025 25025 IDGVSLLVQR 10 0 1 Unmodified _IDGVSLLVQR_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.3326 2 550.327131 1098.63971 85784.27 0.30898 0.00017004 0.3453 0.00019003 0.65429 0.00036007 550.327541390156 555.331681078763 89.134 1.1406 89.134 88.973 90.114 0 327 95 5 0 0 0 6.3643E-13 5 54234 149.82 108.79 1 0.88971 0.96375 0 49478000 26577000 22901000 16058 378 6075 6217 25026;25027;25028;25029;25030 25028 IDGVSLLVQR 10 0 1 Unmodified _IDGVSLLVQR_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.3286 2 550.327131 1098.63971 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.022 1 88.022 87.522 88.522 0 0 0 0 0.0085984 1 54306 59.35 25.553 1 16059 378 6075 6217 25031 25031 IDGVSLLVQR 10 0 1 Unmodified _IDGVSLLVQR_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.3326 2 550.327131 1098.63971 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.077 1 88.077 87.577 88.577 -7.6294E-06 0 0 0 1.2075E-05 1 54334 96.331 55.302 1 16060 378 6075 6217 25032 25032 IDGVSLLVQR 10 0 1 Unmodified _IDGVSLLVQR_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.3321 2 550.327131 1098.63971 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.841 1 88.841 88.341 89.341 0 0 0 0 1.6536E-12 1 54810 125.82 84.788 1 16061 378 6075 6217 25033 25033 IDGVSLLVQR 10 0 1 Unmodified _IDGVSLLVQR_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.3276 2 550.327131 1098.63971 83895.12 0.37704 0.00020749 0.16235 8.9345E-05 0.53938 0.00029684 550.327447565355 555.331446951871 102.43 1.1375 102.43 101.67 102.8 0 286 80 4 0 0 0 0.0018846 3 57959 71.614 42.452 1 1.0497 0.9032 0 7056200 3781900 3274300 16062 378 6075 6217 25034;25035;25036 25035 IDGVSLLVQR 10 0 1 Unmodified _IDGVSLLVQR_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.3322 2 550.327131 1098.63971 84205.63 0.41642 0.00022917 0.11994 6.6005E-05 0.53636 0.00029517 550.327474050508 555.331362323647 102.23 1.0999 102.23 101.61 102.71 0 319 82 5 0 0 0 0.0035438 3 57286 64.04 32.967 1 1.0562 0.8776 0 5946000 2539900 3406100 16063 378 6075 6217 25037;25038;25039 25039 IDIDPEETVK 10 1 0 Unmodified _IDIDPEETVK_ 0 0 0 P54727;B4DEA3;Q53F10;Q5W0S5 P54727 P54727 RAD23B UV excision repair protein RAD23 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.8064 2 579.798069 1157.58158 79442.3 0.42612 0.00024706 0.82166 0.0004764 1.2478 0.00072346 579.798366407639 583.806175696501 67.404 0.91158 67.404 66.858 67.77 0 214 66 4 0 0 0 0.0095663 1 38936 54.539 38.877 1 0.47114 0.50806 0 37532000 25749000 11783000 16064 1610 6076 6218 25040 25040 IDIDPEETVK 10 1 0 Unmodified _IDIDPEETVK_ 0 0 0 P54727;B4DEA3;Q53F10;Q5W0S5 P54727 P54727 RAD23B UV excision repair protein RAD23 homolog B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.807 2 579.798069 1157.58158 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.335 1 66.335 65.835 66.835 0 0 0 0 0.03411 1 39190 49.06 16.219 1 16065 1610 6076 6218 25041 25041 IDIDPEETVK 10 1 0 Unmodified _IDIDPEETVK_ 0 0 0 P54727;B4DEA3;Q53F10;Q5W0S5 P54727 P54727 RAD23B UV excision repair protein RAD23 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.7982 2 579.798069 1157.58158 78588.2 0.36755 0.00021311 0.47534 0.0002756 0.84289 0.00048871 579.798211307001 583.805489273289 77.091 0.88212 77.091 76.759 77.641 0 186 59 5 0 0 0 0.027888 1 41146 43.651 27.989 1 0.96003 0.752 0 11598000 5635600 5962700 16066 1610 6076 6218 25042 25042 IDIIPNPQER 10 0 1 Unmodified _IDIIPNPQER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;O14942 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.8325 2 597.827495 1193.64044 78159.81 0.53278 0.00031851 -0.0026604 -1.5905E-06 0.53012 0.00031692 597.827388330792 602.831627712777 77.089 1.3552 77.089 76.518 77.873 0 609 113 9 0 0 0 7.8785E-05 3 45325 98.033 75.293 1 2.3064 2.7277 0 283230000 84106000 199120000 16067 379 6077 6219 25043;25044;25045 25043 IDIIPNPQER 10 0 1 Unmodified _IDIIPNPQER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;O14942 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.8319 2 597.827495 1193.64044 78728.93 0.4022 0.00024045 -0.62984 -0.00037654 -0.22764 -0.00013609 597.827461347323 602.831735827843 76.047 2.1369 76.047 75.039 77.175 0 801 182 11 0 0 0 0.00050835 3 45641 85.731 56.569 1 2.165 2.5167 0 378880000 118010000 260870000 16068 379 6077 6219 25046;25047;25048 25046 IDIIPNPQER 10 0 1 Unmodified _IDIIPNPQER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;O14942 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8333 2 597.827495 1193.64044 77454.55 0.47527 0.00028413 -0.053323 -3.1878E-05 0.42194 0.00025225 597.82715617206 602.8317537185 87.565 1.2895 87.565 87.032 88.322 0 384 77 7 0 0 0 0.0013651 2 48003 73.985 42.051 1 1.4126 1.1788 0 23227000 8861200 14365000 16069 379 6077 6219 25049;25050 25050 IDIIPNPQER 10 0 1 Unmodified _IDIIPNPQER_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7;O14942 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.8326 2 597.827495 1193.64044 78011.12 0.57401 0.00034316 -0.03032 -1.8126E-05 0.54369 0.00032504 597.827182721277 602.831710553639 87.701 1.3782 87.701 87.14 88.518 0 396 78 7 0 0 0 7.8785E-05 2 47239 98.033 66.099 1 1.4813 1.2766 0 22287000 8876800 13410000 16070 379 6077 6219 25051;25052 25051 IDILDSALLRPGR 13 0 2 Unmodified _IDILDSALLRPGR_ 0 0 1 Q59GS3;A0A140VJS3;P62195 Q59GS3 Q59GS3 PSMC5 26S protease regulatory subunit 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.9563 3 480.284064 1437.83036 88187.82 0.25445 0.00012221 0.095466 4.5851E-05 0.34991 0.00016806 480.283715301284 486.956292338228 105.16 0.81525 105.16 104.79 105.61 0 211 63 5 0 0 0 0.010413 1 64897 35.204 35.204 1 2.0499 2.2146 0 19511000 6812100 12699000 16071 608 6078 6220 25053 25053 IDILDSALLRPGR 13 0 2 Unmodified _IDILDSALLRPGR_ 0 0 1 Q59GS3;A0A140VJS3;P62195 Q59GS3 Q59GS3 PSMC5 26S protease regulatory subunit 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.9561 3 480.284064 1437.83036 87740.24 0.33409 0.00016046 -0.035776 -1.7183E-05 0.29832 0.00014328 480.284030762117 486.956082563032 104.2 0.72026 104.2 103.83 104.55 0 231 59 6 0 0 0 0.032276 1 65782 24.935 24.935 1 2.1344 2.3645 0 23164000 7889200 15275000 16072 608 6078 6220 25054 25054 IDILTELR 8 0 1 Unmodified _IDILTELR_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.7939 2 486.78985 971.565146 86602.91 0.34362 0.00016727 -0.18423 -8.968E-05 0.1594 7.7592E-05 486.789740049074 491.793747608552 101.23 0.93859 101.23 100.79 101.72 0 299 71 6 0 0 0 0.011008 3 61944 70.919 42.812 1 0.7155 0.74349 0 22265000 13999000 8265500 16073 804 6079 6221 25055;25056;25057 25056 IDILTELR 8 0 1 Unmodified _IDILTELR_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7894 2 486.78985 971.565146 87924.34 0.44334 0.00021582 -0.16206 -7.8888E-05 0.28129 0.00013693 486.789681673834 491.793894941154 100.49 0.9147 100.49 99.996 100.91 0 229 75 5 0 0 0 0.009998 2 62879 73.248 73.248 1 0.70995 0.8136 0 51309000 28502000 22807000 16074 804 6079 6221 25058;25059 25058 IDILTELR 8 0 1 Unmodified _IDILTELR_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.7939 2 486.78985 971.565146 88908.06 0.37547 0.00018278 -0.42175 -0.0002053 -0.046275 -2.2526E-05 486.789651850846 491.793875925311 113.48 0.48494 113.48 113.26 113.75 -7.6294E-06 99 23 6 0 0 0 0.062964 1 65114 39.022 29.035 1 0.8348 0.72132 0 3420700 2008700 1412000 16075 804 6079 6221 25060 25060 IDISAVVAYTIAVK 14 1 0 Unmodified _IDISAVVAYTIAVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.9301 2 731.929417 1461.84428 72899.39 0.27053 0.00019801 0.29175 0.00021354 0.56228 0.00041155 731.929514068646 735.936657609071 133.35 0.68291 133.35 132.74 133.43 0 91 25 8 0 0 0 0.001083 1 86789 56.225 53.086 1 0.72887 0.81724 0 65496000 36050000 29446000 16076 2148 6080 6222 25061 25061 IDISAVVAYTIAVK 14 1 0 Unmodified _IDISAVVAYTIAVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.9382 2 731.929417 1461.84428 NaN NaN NaN 0.067716 4.9563E-05 NaN NaN NaN NaN 129.94 0.40076 129.94 129.63 130.03 0 0 0 0 0.000173 1 84658 86.313 42.8 1 NaN NaN 0 2475600 0 2475600 16077 2148 6080 6222 25062 25062 IDISAVVAYTIAVK 14 1 0 Unmodified _IDISAVVAYTIAVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.9294 2 731.929417 1461.84428 NaN NaN NaN -0.40067 -0.00029326 NaN NaN NaN NaN 131.11 1.0393 131.11 130.4 131.44 0 0 0 0 0.0025167 1 85610 65.395 45.609 1 NaN NaN 0 3637700 3637700 0 16078 2148 6080 6222 25063 25063 IDISAVVAYTIAVK 14 1 0 Unmodified _IDISAVVAYTIAVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.9296 2 731.929417 1461.84428 NaN NaN NaN -0.13331 -9.7577E-05 NaN NaN NaN NaN 132.09 0.93292 132.09 131.86 132.79 0 0 0 0 0.0011146 1 86203 73.781 51.041 1 NaN NaN 0 2577800 2577800 0 16079 2148 6080 6222 25064 25064 IDISAVVAYTIAVK 14 1 0 Unmodified _IDISAVVAYTIAVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.9369 2 731.929417 1461.84428 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.65 1 130.65 130.15 131.15 0 0 0 0 0.0013598 1 85200 73.781 47.662 1 16080 2148 6080 6222 25065 25065 IDISAVVAYTIAVK 14 1 0 Unmodified _IDISAVVAYTIAVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.9369 2 731.929417 1461.84428 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.48 1 131.48 130.98 131.98 1.5259E-05 0 0 0 0.013457 1 85815 48.741 21.626 1 16081 2148 6080 6222 25066 25066 IDISAVVAYTIAVK 14 1 0 Unmodified _IDISAVVAYTIAVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.4317 2 731.929417 1461.84428 73293.45 0.90246 0.00066053 -0.10371 -7.5906E-05 0.79875 0.00058463 732.430962018618 736.437926879491 130.63 1.283 130.63 129.72 131 0 237 88 4 0 0 0 0.00012949 2 87398 80.245 80.245 1 0.662 0.66224 0 6689800 3433700 3256000 16082 2148 6080 6222 25067;25068 25068 IDISAVVAYTIAVK 14 1 0 Unmodified _IDISAVVAYTIAVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.9366 2 731.929417 1461.84428 72656.52 0.28711 0.00021014 0.36689 0.00026854 0.654 0.00047868 731.929293266681 735.937125711267 133.32 1.0276 133.32 132.55 133.57 0 121 43 7 0 0 0 0.0036985 2 89551 46.706 46.706 1 0.69923 0.78468 0 115030000 68651000 46374000 16083 2148 6080 6222 25069;25070 25070 IDISAVVAYTIAVK 14 1 0 Unmodified _IDISAVVAYTIAVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.4385 2 731.929417 1461.84428 NaN NaN NaN -0.14297 -0.00010464 NaN NaN NaN NaN 131.32 0.2652 131.32 131.15 131.42 0 0 0 0 0.0015088 1 87864 70.488 34.529 1 NaN NaN 0 2749900 0 2749900 16084 2148 6080 6222 25071 25071 IDISAVVAYTIAVK 14 1 0 Unmodified _IDISAVVAYTIAVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.9383 2 731.929417 1461.84428 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.54 1 129.54 129.04 130.04 0 0 0 0 0.013457 1 86536 48.741 25.421 1 16085 2148 6080 6222 25072 25072 IDISAVVAYTIAVK 14 1 0 Unmodified _IDISAVVAYTIAVK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.9286 2 731.929417 1461.84428 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.09 1 132.09 131.59 132.59 -1.5259E-05 0 0 0 0.00075177 1 88453 79.82 50.347 1 16086 2148 6080 6222 25073 25073 IDISNVK 7 1 0 Unmodified _IDISNVK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 394.7293 2 394.729261 787.443968 94487.36 0.33611 0.00013267 0.19333 7.6312E-05 0.52944 0.00020899 394.729318707626 398.736309889209 38.505 1.3595 38.505 38.069 39.428 -3.8147E-06 476 116 9 0 0 0 0.014426 1 20068 100.07 25.349 1 1.036 1.2239 0 1238300000 636770000 601490000 16087 342 6081 6223 25074 25074 IDISPSTFR 9 0 1 Unmodified _IDISPSTFR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.2775 2 518.277106 1034.53966 NaN NaN NaN 0.76089 0.00039435 NaN NaN NaN NaN 76.184 0.79114 76.184 75.776 76.567 0 0 0 0 0.052695 1 44670 46.158 2.9118 1 NaN NaN 0 6398100 6398100 0 16088 2128 6082 6224 25075 25075 IDISPSTFR 9 0 1 Unmodified _IDISPSTFR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.2782 2 518.277106 1034.53966 NaN NaN NaN 1.0027 0.0005197 NaN NaN NaN NaN 75.042 0.87634 75.042 74.67 75.546 0 0 0 0 0.019876 1 45103 58.981 17.952 1 NaN NaN 0 6834400 6834400 0 16089 2128 6082 6224 25076 25076 IDISPSTLR 9 0 1 Unmodified _IDISPSTLR_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2885 2 501.284931 1000.55531 NaN NaN NaN 0.49031 0.00024579 NaN NaN NaN NaN 69.82 0.29266 69.82 69.646 69.939 0 0 0 0 0.017823 1 40626 60.59 34.853 1 NaN NaN 0 5152700 0 5152700 16090 2083 6083 6225 25077 25077 IDISPSTLR 9 0 1 Unmodified _IDISPSTLR_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.2906 2 501.284931 1000.55531 NaN NaN NaN 0.5602 0.00028082 NaN NaN NaN NaN 68.636 0.22864 68.636 68.476 68.705 0 0 0 0 0.019876 1 40826 58.981 28.796 1 NaN NaN 0 4750000 0 4750000 16091 2083 6083 6225 25078 25078 IDIVENR 7 0 1 Unmodified _IDIVENR_ 0 0 0 Q5T6L4;P00966;A8KAP9;B4E395 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.7418 2 429.737617 857.460681 NaN NaN NaN -0.69428 -0.00029836 NaN NaN NaN NaN 36.318 0.77548 36.318 35.935 36.711 0 0 0 0 0.024268 1 18564 94.662 20.146 1 NaN NaN 0 29092000 0 29092000 16092 1437 6084 6226 25079 25079 IDIYQLDTASISGTITNEK 19 1 0 Unmodified _IDIYQLDTASISGTITNEK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1046.0432 2 1041.53369 2081.05283 60865.05 0.53098 0.00055303 -0.03351 -3.4902E-05 0.49747 0.00051813 1042.03487677283 1045.54080148692 112.51 0.67272 112.51 112.28 112.95 7.6294E-06 285 49 9 0 0 0 3.4327E-12 2 70992 107.74 98.846 1 0.92972 1.0077 0 44386000 19539000 24846000 16093 580 6085 6227 25080;25081 25081 IDIYQLDTASISGTITNEK 19 1 0 Unmodified _IDIYQLDTASISGTITNEK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1042.0352 2 1041.53369 2081.05283 59578.21 0.81646 0.00085037 -0.19121 -0.00019915 0.62525 0.00065122 1042.03511211916 1045.54045265068 112.01 0.58462 112.01 111.79 112.37 0 267 44 8 0 0 0 1.1405E-22 3 72328 132.08 132.08 1 1.0182 1.13 0 48691000 22979000 25712000 16094 580 6085 6227 25082;25083;25084 25082 IDIYQLDTASISGTITNEK 19 1 0 Unmodified _IDIYQLDTASISGTITNEK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1041.5332 2 1041.53369 2081.05283 59794.45 0.54931 0.00057212 0.021589 2.2485E-05 0.5709 0.00059461 1042.03511234754 1045.54072358322 123.6 0.79854 123.6 123.33 124.12 -7.6294E-06 222 32 10 0 0 0 0.00016591 2 73829 46.964 46.964 1 1.3624 1.1693 0 81184000 34268000 46916000 16095 580 6085 6227 25085;25086 25085 IDIYQLDTASISGTITNEK 19 1 0 Unmodified _IDIYQLDTASISGTITNEK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1041.5337 2 1041.53369 2081.05283 59779.18 0.5312 0.00055326 0.043305 4.5103E-05 0.5745 0.00059837 1042.03520374969 1045.54067552048 123.5 0.74072 123.5 123.19 123.93 0 176 30 10 0 0 0 5.5076E-64 3 72879 179.39 167.75 1 1.3743 1.1524 0 47546000 20145000 27401000 16096 580 6085 6227 25087;25088;25089 25089 IDKPILK 7 2 0 Unmodified _IDKPILK_ 0 0 1 P62917;E9PKZ0;E9PKU4;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 842.022 1 826.539666 825.53239 68264.72 0.28838 0.00023836 0.0030105 2.4883E-06 0.29139 0.00024085 826.539579141448 842.568030800115 28.841 0.28847 28.841 28.705 28.993 -1.9073E-06 47 16 4 0 0 0 0.054552 1 11175 3.1278 0 1 0.93326 0.80872 0 1143200 518310 624890 16097 1653 6086 6228 25090 25090 IDLAVLLGK 9 1 0 Unmodified _IDLAVLLGK_ 0 0 0 B4DZJ6;B4DYY5;F8W726;Q14157;Q5VU77 B4DZJ6 B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.3122 2 471.305136 940.595718 91470.56 0.40665 0.00019166 -0.23696 -0.00011168 0.1697 7.9979E-05 471.305066794004 475.312012956135 116.78 0.55155 116.78 116.56 117.11 7.6294E-06 130 37 5 0 0 0 0.0016026 2 74629 83.265 58.342 1 2.9872 2.9301 0 8824800 2224000 6600800 16098 1052 6087 6229 25091;25092 25092 IDLAVLLGK 9 1 0 Unmodified _IDLAVLLGK_ 0 0 0 B4DZJ6;B4DYY5;F8W726;Q14157;Q5VU77 B4DZJ6 B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.3126 2 471.305136 940.595718 92279.63 0.34491 0.00016256 -0.12956 -6.1063E-05 0.21535 0.00010149 471.305073308313 475.312096166954 116.28 0.58694 116.28 115.93 116.52 0 128 37 5 0 0 0 0.00085417 2 75996 93.429 66.174 1 2.5656 2.5762 0 13697000 3814900 9881600 16099 1052 6087 6229 25093;25094 25094 IDLDSMENSER 11 0 1 Oxidation (M) _IDLDSM(ox)ENSER_ IDLDSM(1)ENSER IDLDSM(68.66)ENSER 0 1 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5;H0Y9E6 B3KVZ3 B3KVZ3 CENPH Centromere protein H MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.7888 2 662.787906 1323.56126 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.457 1 32.457 31.957 32.957 0 0 0 0 0.0009067 1 16095 68.657 49.386 1 16100 585 6088 6230 25095 25095 436 IDLDSMENSER 11 0 1 Oxidation (M) _IDLDSM(ox)ENSER_ IDLDSM(1)ENSER IDLDSM(42.39)ENSER 0 1 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5;H0Y9E6 B3KVZ3 B3KVZ3 CENPH Centromere protein H MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.7865 2 662.787906 1323.56126 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.755 1 31.755 31.255 32.255 -1.9073E-06 0 0 0 0.027236 1 15762 42.395 22.091 1 16101 585 6088 6230 25096 25096 436 IDLEAHVDLVK 11 1 0 Unmodified _IDLEAHVDLVK_ 0 0 0 REV__B3KM42 REV__B3KM42 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.3503 2 626.350803 1250.68705 77896.42 0.5267 0.0003299 -0.50163 -0.00031419 0.025072 1.5704E-05 626.350255226908 630.357605235565 85.278 0.48737 85.278 85.075 85.562 0 141 31 6 0 0 0 0.0058056 1 46643 55.549 37.238 1 1.298 1.029 0 4263200 1922000 2341200 + 16102 2169 6089 6231 25097 25097 IDLENTLEQEQEALVNR 17 0 1 Unmodified _IDLENTLEQEQEALVNR_ 0 0 0 Q05CP8;A0A024QZJ7;Q16204 Q05CP8 Q05CP8 CCDC6 Coiled-coil domain-containing protein 6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1012.5136 2 1007.50801 2013.00146 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.53 1 112.53 112.03 113.03 0 0 0 0 0.0066955 1 71078 48.568 37.622 1 16103 1686 6090 6232 25098 25098 IDLENTLEQEQEALVNR 17 0 1 Unmodified _IDLENTLEQEQEALVNR_ 0 0 0 Q05CP8;A0A024QZJ7;Q16204 Q05CP8 Q05CP8 CCDC6 Coiled-coil domain-containing protein 6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1012.5129 2 1007.50801 2013.00146 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.99 1 111.99 111.49 112.49 0 0 0 0 0.00045149 1 72389 65.563 50.018 1 16104 1686 6090 6232 25099 25099 IDLLDRK 7 1 1 Unmodified _IDLLDRK_ 0 0 1 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.776 2 436.763635 871.512717 NaN NaN NaN 0.53813 0.00023503 NaN NaN NaN NaN 40.809 0.34011 40.809 40.653 40.993 0 0 0 0 0.033351 1 21390 81.297 0 1 NaN NaN 0 12630000 0 12630000 16105 567 6091 6233 25100 25100 IDLPAENSNSETIIITGK 18 1 0 Unmodified _IDLPAENSNSETIIITGK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3;H7C2D1 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 962.0125 2 958.00457 1913.99459 63035.38 0.72731 0.00069676 0.05252 5.0315E-05 0.77983 0.00074708 958.004782657392 962.011588750516 98.471 0.57359 98.471 98.188 98.762 0 195 47 6 0 0 0 7.35E-05 2 60335 50.897 50.897 1 2.0625 2.1474 0 29701000 10818000 18883000 16106 154 6092 6234 25101;25102 25102 IDLPAENSNSETIIITGK 18 1 0 Unmodified _IDLPAENSNSETIIITGK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3;H7C2D1 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 962.5131 2 958.00457 1913.99459 63038.27 0.3183 0.00030494 0.36403 0.00034874 0.68233 0.00065368 958.005387460813 962.011916140345 97.847 0.52451 97.847 97.547 98.071 0 178 41 6 0 0 0 0.013768 1 61116 26.124 26.124 1 1.912 1.9454 0 16893000 5468800 11424000 16107 154 6092 6234 25103 25103 IDLPAENSNSETIIITGK 18 1 0 Unmodified _IDLPAENSNSETIIITGK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3;H7C2D1 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 958.0055 2 958.00457 1913.99459 63450.1 0.46555 0.000446 1.2461 0.0011938 1.7117 0.0016398 958.006079771747 962.012743286941 111.24 0.44429 111.24 110.99 111.43 -7.6294E-06 77 18 7 0 0 0 0.0055277 1 64422 33.147 33.147 1 1.3766 1.0941 0 2979400 1242000 1737400 16108 154 6092 6234 25104 25104 IDLTLLNR 8 0 1 Unmodified _IDLTLLNR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.2951 2 479.290017 956.565481 87726.93 0.3465 0.00016608 0.13393 6.419E-05 0.48043 0.00023027 479.290034906758 484.294095549154 93.36 0.46107 93.36 93.006 93.467 0 132 37 6 0 0 0 0.0092533 1 56493 75.109 28.683 1 0.99263 1.0592 0 44237000 20902000 23335000 16109 1854 6093 6235 25105 25105 IDLTLLNR 8 0 1 Unmodified _IDLTLLNR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.2943 2 479.290017 956.565481 88659.01 0.23155 0.00011098 0.61978 0.00029705 0.85133 0.00040803 479.290484178316 484.294116009807 92.764 1.0788 92.764 92.247 93.326 0 325 91 6 0 0 0 0.013465 1 57222 65.252 20.805 1 0.75314 0.86742 0 73617000 39265000 34352000 16110 1854 6093 6235 25106 25106 IDLTLLNR 8 0 1 Unmodified _IDLTLLNR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.2939 2 479.290017 956.565481 88266.16 0.29074 0.00013935 0.020199 9.6812E-06 0.31094 0.00014903 479.289878855276 484.294171690275 106.42 0.64866 106.42 106.04 106.69 7.6294E-06 146 34 6 0 0 0 0.029249 1 60747 52.716 9.4697 1 0.85156 0.72596 0 5564400 2957800 2606700 16111 1854 6093 6235 25107 25107 IDLTLLNR 8 0 1 Unmodified _IDLTLLNR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.2943 2 479.290017 956.565481 88481.25 0.38938 0.00018663 -0.26934 -0.00012909 0.12004 5.7536E-05 479.289696085577 484.294056544557 106.23 0.66309 106.23 105.86 106.53 7.6294E-06 134 38 6 0 0 0 0.059544 1 59758 40.268 6.7178 1 0.88346 0.73476 0 6079500 3352700 2726800 16112 1854 6093 6235 25108 25108 IDNDGDGFVTTEELK 15 1 0 Unmodified _IDNDGDGFVTTEELK_ 0 0 0 V9HW95;Q15293 V9HW95 V9HW95 HEL-S-84;RCN1 Reticulocalbin-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.8879 2 826.886132 1651.75771 NaN NaN NaN -4.0056 -0.0033122 NaN NaN NaN NaN 77.042 0.14848 77.042 76.944 77.093 0 0 0 0 2.0058E-06 1 45460 92.856 78.951 1 NaN NaN 0 5503000 5503000 0 16113 1757 6094 6236 25109 25109 IDNDGDGFVTTEELK 15 1 0 Unmodified _IDNDGDGFVTTEELK_ 0 0 0 V9HW95;Q15293 V9HW95 V9HW95 HEL-S-84;RCN1 Reticulocalbin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.8944 2 826.886132 1651.75771 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.994 1 76.994 76.494 77.494 0 0 0 0 0.0016022 1 45445 70.412 61.305 1 16114 1757 6094 6236 25110 25110 IDNLDVNR 8 0 1 Unmodified _IDNLDVNR_ 0 0 0 O75475 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 479.7514 2 479.751256 957.487959 91634.84 0.079158 3.7976E-05 0.21844 0.0001048 0.2976 0.00014277 479.751253432926 484.755480787971 38.461 0.72399 38.461 38.093 38.817 0 212 55 6 0 0 0 0.013893 2 17008 64.265 15.703 1 0.75278 0.65877 0 4202900 2355800 1847100 16115 1405 6095 6237 25111;25112 25112 IDNSNTPFLPK 11 1 0 Unmodified _IDNSNTPFLPK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.335 2 623.327328 1244.6401 76510.2 0.75406 0.00047003 0.39574 0.00024668 1.1498 0.0007167 623.327573274701 627.334594537554 70.726 0.63917 70.726 70.424 71.063 0 247 52 7 0 0 0 0.00013719 1 41106 95.523 95.523 1 0.86788 0.93555 0 37686000 19177000 18508000 16116 1676 6096 6238 25113 25113 IDPLALVQAIER 12 0 1 Unmodified _IDPLALVQAIER_ 0 0 0 Q14669 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.3985 2 669.393002 1336.77145 78266.48 0.98957 0.00066241 0.35548 0.00023795 1.345 0.00090037 669.393029481452 674.397352289305 131.15 0.36459 131.15 130.98 131.34 0 63 26 4 0 0 0 0.010522 2 87703 46.352 33.132 1 1.3092 1.3044 0 7126800 2191000 4935700 16117 1736 6097 6239 25114;25115 25114 IDPNVLLDPADEK 13 1 0 Unmodified _IDPNVLLDPADEK_ 0 0 0 A0A024R0H6;Q8N7H5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.8761 2 719.874839 1437.73512 NaN NaN NaN 0.1828 0.00013159 NaN NaN NaN NaN 97.466 0.58464 97.466 97.178 97.762 0 0 0 0 0.027768 1 59375 43.897 22.449 1 NaN NaN 0 25772000 25772000 0 16118 46 6098 6240 25116 25116 IDPNVLLDPADEK 13 1 0 Unmodified _IDPNVLLDPADEK_ 0 0 0 A0A024R0H6;Q8N7H5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.8768 2 719.874839 1437.73512 NaN NaN NaN -0.30392 -0.00021879 NaN NaN NaN NaN 96.729 0.7 96.729 96.491 97.191 7.6294E-06 0 0 0 0.0056231 1 60312 57.003 46.771 1 NaN NaN 0 19288000 19288000 0 16119 46 6098 6240 25117 25117 IDRIEESDQGPYAIILAPTR 20 0 2 Unmodified _IDRIEESDQGPYAIILAPTR_ 0 0 1 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.0667 3 753.065613 2256.17501 70035.8 0.9372 0.00070577 -0.12043 -9.0695E-05 0.81676 0.00061508 753.399311275792 760.072424711445 102.03 0.80305 102.03 101.53 102.33 0 348 63 8 0 0 0 0.015044 1 62659 22.118 18.78 1 0.63869 0.69008 0 19729000 13617000 6111900 16120 63 6099 6241 25118 25118 IDRIEESDQGPYAIILAPTR 20 0 2 Unmodified _IDRIEESDQGPYAIILAPTR_ 0 0 1 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.4011 3 753.065613 2256.17501 70094.6 0.52829 0.00039784 -0.11897 -8.9593E-05 0.40932 0.00030825 753.398947720063 759.737555079695 100.96 0.90522 100.96 100.59 101.49 0 295 71 7 0 0 0 2.1162E-06 1 63409 58.373 55.039 1 0.70002 0.77664 0 23646000 10800000 12846000 16121 63 6099 6241 25119 25119 IDRIEESDQGPYAIILAPTR 20 0 2 Unmodified _IDRIEESDQGPYAIILAPTR_ 0 0 1 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 760.0725 3 753.065613 2256.17501 71415.78 1.0277 0.00077392 0.13496 0.00010164 1.1627 0.00087555 753.399880511138 759.737642975092 113.14 0.35453 113.14 113 113.35 0 89 17 8 0 0 0 0.04432 1 65903 16.593 16.593 1 0.88125 0.78946 0 3554800 1832400 1722400 16122 63 6099 6241 25120 25120 IDRIEESDQGPYAIILAPTR 20 0 2 Unmodified _IDRIEESDQGPYAIILAPTR_ 0 0 1 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.4019 3 753.065613 2256.17501 70824.19 0.65035 0.00048976 0.47048 0.00035431 1.1208 0.00084406 753.400528921377 759.737513032959 113.03 0.45617 113.03 112.8 113.26 0 76 22 6 0 0 0 0.035531 1 64887 18.251 18.251 1 1.1678 1.0571 0 4562200 2701600 1860600 16123 63 6099 6241 25121 25121 IDRTDAISEEK 11 1 1 Unmodified _IDRTDAISEEK_ 0 0 1 Q8NG23;Q6FID4;Q5SQT9;Q9NR31;H0Y5E8 Q8NG23 Q8NG23 SARA1;SAR1A GTP-binding protein SAR1a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.8342 2 638.822606 1275.63066 NaN NaN NaN -0.21995 -0.00014051 NaN NaN NaN NaN 20.582 0.30374 20.582 20.45 20.754 0 0 0 0 0.017687 1 6923 83.862 15.965 1 NaN NaN 0 15762000 0 15762000 16124 1815 6100 6242 25122 25122 IDSDLGDAWAFFYK 14 1 0 Unmodified _IDSDLGDAWAFFYK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.3961 2 824.388113 1646.76167 68351.24 1.1177 0.00092143 -0.37152 -0.00030628 0.74619 0.00061515 824.889548053862 828.394069321372 126.57 0.57648 126.57 126.34 126.91 7.6294E-06 191 42 7 0 0 0 2.7814E-09 3 82309 115.18 115.18 1 0.66823 0.68755 0 10749000 6208200 4541100 16125 1418 6101 6243 25123;25124;25125 25123 IDSDLGDAWAFFYK 14 1 0 Unmodified _IDSDLGDAWAFFYK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.3885 2 824.388113 1646.76167 68665.08 1.04 0.00085736 -0.2658 -0.00021912 0.7742 0.00063824 824.889547360661 828.393956789154 126.22 0.54629 126.22 125.93 126.47 -7.6294E-06 171 33 7 0 0 0 3.0841E-14 2 84093 128.01 128.01 1 0.51745 0.53842 0 11105000 7598600 3506000 16126 1418 6101 6243 25126;25127 25126 IDSIPHLNNSTPLVDPSVYGYGVQK 25 1 0 Unmodified _IDSIPHLNNSTPLVDPSVYGYGVQK_ 0 0 0 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 908.1398 3 905.132575 2712.3759 NaN NaN NaN 0.37031 0.00033518 NaN NaN NaN NaN 108.04 0.32454 108.04 107.85 108.18 0 0 0 0 0.040996 1 67406 23.44 16.247 1 NaN NaN 0 6004800 0 6004800 16127 245 6102 6244 25128 25128 IDSLSAQLSQLQK 13 1 0 Unmodified _IDSLSAQLSQLQK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.8976 2 715.896106 1429.77766 71904.27 0.92171 0.00065985 -0.04101 -2.9359E-05 0.8807 0.00063049 715.896394110614 719.902919233311 86.941 0.88684 86.941 86.63 87.516 0 434 72 10 0 0 0 6.585E-89 3 52343 230.95 167.88 1 1.2937 1.532 0 445420000 199660000 245760000 16128 1440 6103 6245 25129;25130;25131 25131 IDSLSAQLSQLQK 13 1 0 Unmodified _IDSLSAQLSQLQK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.9042 2 715.896106 1429.77766 71118.41 0.536 0.00038372 0.070565 5.0517E-05 0.60656 0.00043423 715.896338266242 719.903133242392 86.153 1.2585 86.153 85.526 86.784 0 550 104 8 0 0 0 3.0129E-122 2 53015 252.97 196.96 1 1.3066 1.5034 0 176010000 75573000 100440000 16129 1440 6103 6245 25132;25133 25132 IDSLSAQLSQLQK 13 1 0 Unmodified _IDSLSAQLSQLQK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.4039 2 715.896106 1429.77766 72061.12 0.60024 0.00042971 0.4263 0.00030519 1.0265 0.00073489 715.896443429288 719.903421094101 99.96 1.1536 99.96 99.082 100.24 0 258 76 8 0 0 0 2.3253E-13 3 56478 128.01 101.23 1 1.4529 1.1951 0 39326000 16278000 23048000 16130 1440 6103 6245 25134;25135;25136 25134 IDSLSAQLSQLQK 13 1 0 Unmodified _IDSLSAQLSQLQK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 715.8966 2 715.896106 1429.77766 72274.64 0.54686 0.0003915 0.61995 0.00044382 1.1668 0.00083531 715.896343803483 719.903805848353 99.87 0.60942 99.87 99.652 100.26 0 300 55 8 0 0 0 1.6489E-23 2 55580 154.05 129.01 1 1.3442 1.1215 0 41985000 16602000 25383000 16131 1440 6103 6245 25137;25138 25138 IDSWENAEDFLEK 13 1 0 Unmodified _IDSWENAEDFLEK_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.8749 2 798.364835 1594.71512 69822.37 0.97018 0.00077456 0.12084 9.6476E-05 1.091 0.00087103 798.364575978872 802.371758331974 104.53 0.68717 104.53 104.24 104.93 0 237 57 6 0 0 0 0.0024841 2 64529 53.569 49.26 1 1.0254 1.0415 0 13364000 6095800 7268300 16132 1721 6104 6246 25139;25140 25139 IDSWENAEDFLEK 13 1 0 Unmodified _IDSWENAEDFLEK_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.3643 2 798.364835 1594.71512 70055.48 0.64798 0.00051733 0.36343 0.00029015 1.0114 0.00080748 798.364451839773 802.372119885123 103.88 0.6051 103.88 103.56 104.17 0 254 53 6 0 0 0 0.00015285 2 65654 88.187 88.187 1 0.97348 0.97322 0 14078000 7123800 6954600 16133 1721 6104 6246 25141;25142 25141 IDSWENAEDFLEK 13 1 0 Unmodified _IDSWENAEDFLEK_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 798.3658 2 798.364835 1594.71512 68822.69 0.67785 0.00054117 0.59722 0.0004768 1.2751 0.001018 798.364944787916 802.372187580348 116.17 0.59681 116.17 115.93 116.53 -7.6294E-06 136 25 7 0 0 0 0.010685 2 68147 41.401 37.638 1 1.3014 1.0343 0 10043000 4770700 5272100 16134 1721 6104 6246 25143;25144 25143 IDSWENAEDFLEK 13 1 0 Unmodified _IDSWENAEDFLEK_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 802.3727 2 798.364835 1594.71512 NaN NaN NaN -0.017996 -1.4367E-05 NaN NaN NaN NaN 116.13 0.78546 116.13 115.92 116.7 0 0 0 0 0.00026071 1 67272 88.187 69.919 1 NaN NaN 0 4300400 0 4300400 16135 1721 6104 6246 25145 25145 IDTIEIITDR 10 0 1 Unmodified _IDTIEIITDR_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8319 2 594.82716 1187.63977 78148.27 1.0849 0.00064534 0.18548 0.00011033 1.2704 0.00075568 594.827228008841 599.831327558811 91.24 1.2021 91.24 90.702 91.904 0 532 97 8 0 0 0 4.0917E-06 2 55114 117.53 83.273 1 2.1811 2.579 0 267890000 87205000 180680000 16136 1508 6105 6247 25146;25147 25147 IDTIEIITDR 10 0 1 Unmodified _IDTIEIITDR_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8314 2 594.82716 1187.63977 78755.73 1.184 0.00070425 0.12085 7.1884E-05 1.3048 0.00077613 594.827276979239 599.831307438685 90.365 1.0493 90.365 89.923 90.972 0 532 88 9 0 0 0 7.4352E-06 2 55703 118.18 84.414 1 2.1253 2.4702 0 375880000 114860000 261020000 16137 1508 6105 6247 25148;25149 25149 IDTIEIITDR 10 0 1 Unmodified _IDTIEIITDR_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.8318 2 594.82716 1187.63977 78464.96 0.56265 0.00033468 0.20862 0.00012409 0.77127 0.00045877 594.827210223469 599.831413320899 104.08 0.9366 104.08 103.73 104.67 0 295 57 8 0 0 0 1.2036E-05 2 59154 103.7 90.906 1 1.2005 1.016 0 31072000 14781000 16291000 16138 1508 6105 6247 25150;25151 25151 IDTIEIITDR 10 0 1 Unmodified _IDTIEIITDR_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.8321 2 594.82716 1187.63977 77960.73 0.43031 0.00025596 0.39152 0.00023289 0.82183 0.00048885 594.827333345035 599.83148548046 103.91 0.99429 103.91 103.49 104.48 0 289 65 8 0 0 0 2.6362E-06 2 58172 114.5 88.67 1 1.1949 1.0423 0 29805000 13206000 16599000 16139 1508 6105 6247 25152;25153 25152 IDTMGTYHGMTLK 13 1 0 2 Oxidation (M) _IDTM(ox)GTYHGM(ox)TLK_ IDTM(1)GTYHGM(1)TLK IDTM(40.28)GTYHGM(40.28)TLK 0 2 0 Q6P1J9;A0A0S2Z5M9;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.2382 3 500.567143 1498.6796 85770.73 0.052502 2.6281E-05 -1.4377 -0.00071966 -1.3852 -0.00069338 500.566962587754 503.237994598706 27.292 0.23377 27.292 27.167 27.401 0 65 12 7 0 0 0 0.0051425 1 12555 40.278 33.8 1 2.1588 2.1807 0 26798000 8132500 18665000 16140 1851 6106 6248 25154 25154 1701;1702 IDTTSFLANLK 11 1 0 Unmodified _IDTTSFLANLK_ 0 0 0 Q8NG31;E9PPJ1;Q05C46 Q8NG31;Q05C46 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.8373 2 611.837528 1221.6605 80016.74 0.73424 0.00044923 -0.17052 -0.00010433 0.56371 0.0003449 611.837378991991 615.844465080813 106.42 0.56523 106.42 106.13 106.7 -7.6294E-06 140 43 5 0 0 0 0.00036511 1 67749 84.213 84.213 1 0.82028 0.85236 0 11167000 5513300 5654100 16141 1928;1685 6107 6249 25155 25155 IDTTSFLANLK 11 1 0 Unmodified _IDTTSFLANLK_ 0 0 0 Q8NG31;E9PPJ1;Q05C46 Q8NG31;Q05C46 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.845 2 611.837528 1221.6605 78893.15 0.53819 0.00032929 0.22328 0.00013661 0.76147 0.0004659 611.837414369159 615.844566913723 118.22 0.46223 118.22 118 118.46 0 86 20 6 0 0 0 0.0068025 1 68911 53.751 44.045 1 1.1872 0.97406 0 5283100 2367000 2916100 16142 1928;1685 6107 6249 25156 25156 IDVAFVDR 8 0 1 Unmodified _IDVAFVDR_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.7538 2 467.753267 933.491981 NaN NaN NaN 0.8368 0.00039142 NaN NaN NaN NaN 74.108 1.0014 74.108 73.349 74.35 0 0 0 0 0.039261 1 44221 54.157 17.063 1 NaN NaN 0 14952000 14952000 0 16143 1763 6108 6250 25157 25157 IDVASIK 7 1 0 Unmodified _IDVASIK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 373.226 2 373.226354 744.438155 99336.58 0.11862 4.4274E-05 0.12262 4.5764E-05 0.24124 9.0038E-05 373.226241542787 377.233436989656 46.152 0.91602 46.152 45.727 46.643 0 306 79 6 0 0 0 0.03384 1 24794 63.306 15.391 1 1.0826 1.2201 0 75459000 35948000 39512000 16144 1717 6109 6251 25158 25158 IDVGEAEPR 9 0 1 Unmodified _IDVGEAEPR_ 0 0 0 A0A0S2Z4R1;P54577 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.2565 2 493.251089 984.487624 NaN NaN NaN 0.16622 8.1987E-05 NaN NaN NaN NaN 36.045 0.39576 36.045 35.879 36.274 0 0 0 0 0.042582 1 18120 49.418 22.816 1 NaN NaN 0 18234000 0 18234000 16145 567 6110 6252 25159 25159 IDVGEAEPR 9 0 1 Unmodified _IDVGEAEPR_ 0 0 0 A0A0S2Z4R1;P54577 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.2564 2 493.251089 984.487624 NaN NaN NaN 0.0909 4.4837E-05 NaN NaN NaN NaN 35.21 0.47377 35.21 34.988 35.462 0 0 0 0 0.038893 2 17871 50.607 23.082 1 NaN NaN 0 22631000 0 22631000 16146 567 6110 6252 25160;25161 25160 IDVGEAEPR 9 0 1 Unmodified _IDVGEAEPR_ 0 0 0 A0A0S2Z4R1;P54577 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.2551 2 493.251089 984.487624 88037.38 -0.12115 -5.9758E-05 0.26481 0.00013062 0.14366 7.086E-05 493.250567193487 498.25546958858 41.367 0.32977 41.367 41.185 41.515 0 75 25 4 0 0 0 0.040397 1 18657 41.876 19.745 1 3.4218 2.9522 0 1658500 467650 1190900 16147 567 6110 6252 25162 25162 IDVLLQQIEELGSEGK 16 1 0 Unmodified _IDVLLQQIEELGSEGK_ 0 0 0 Q6PKC2;Q86Y74;B4DJ96;A8K3C5;J3KPP4;O95232 Q6PKC2 Q6PKC2 CROP;LUC7L3 Luc7-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 890.488 2 885.977824 1769.94109 66193.24 0.79092 0.00070074 0.05592 4.9544E-05 0.84684 0.00075028 886.479281570567 889.985061435557 123.57 0.47784 123.57 123.26 123.74 -7.6294E-06 155 34 6 0 0 0 3.665E-12 3 80171 117.98 117.98 1 0.91792 0.93649 0 10431000 5566500 4864500 16148 722 6111 6253 25163;25164;25165 25164 IDVLLQQIEELGSEGK 16 1 0 Unmodified _IDVLLQQIEELGSEGK_ 0 0 0 Q6PKC2;Q86Y74;B4DJ96;A8K3C5;J3KPP4;O95232 Q6PKC2 Q6PKC2 CROP;LUC7L3 Luc7-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.4803 2 885.977824 1769.94109 65988.41 0.95873 0.00084941 0.23196 0.00020551 1.1907 0.0010549 885.977726701012 889.984916620646 123.14 0.61866 123.14 122.79 123.41 0 206 46 8 0 0 0 3.6725E-05 1 81652 84.718 84.718 1 0.87409 0.88763 0 12783000 6700100 6082800 16149 722 6111 6253 25166 25166 IDVSINECYDGSYAGNPQDIHR 22 0 1 Unmodified _IDVSINECYDGSYAGNPQDIHR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 842.381 3 841.711682 2522.11322 66573.12 0.45887 0.00038624 0.29133 0.00024522 0.75021 0.00063146 842.045872793511 845.381553726004 77.288 0.55919 77.288 77.002 77.561 0 270 47 8 0 0 0 4.5406E-09 1 45589 76.015 76.015 1 0.82504 0.83586 0 18042000 10133000 7908900 16150 1336 6112 6254 25167 25167 IDVSINECYDGSYAGNPQDIHR 22 0 1 Unmodified _IDVSINECYDGSYAGNPQDIHR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.0465 3 841.711682 2522.11322 66892.66 0.2652 0.00022322 -0.013212 -1.1121E-05 0.25199 0.0002121 842.046174436269 845.047757575016 76.378 0.59731 76.378 76.138 76.735 0 228 45 8 0 0 0 3.0096E-16 1 46081 105.67 105.67 1 0.92273 0.98293 0 24439000 13955000 10485000 16151 1336 6112 6254 25168 25168 IDVSINECYDGSYAGNPQDIHR 22 0 1 Unmodified _IDVSINECYDGSYAGNPQDIHR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 845.0486 3 841.711682 2522.11322 65270.14 0.85149 0.00071671 -0.4301 -0.00036202 0.42139 0.00035469 842.045765744654 845.381747777668 88.716 0.70439 88.716 88.37 89.074 0 367 45 12 0 0 0 2.415E-16 2 48873 107.06 107.06 1 1.872 1.53 0 15939000 5826300 10113000 16152 1336 6112 6254 25169;25170 25169 IDVSINECYDGSYAGNPQDIHR 22 0 1 Unmodified _IDVSINECYDGSYAGNPQDIHR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.3825 3 841.711682 2522.11322 65629.4 0.40862 0.00034394 0.27049 0.00022767 0.67911 0.00057161 842.04639178124 845.382298660227 88.658 0.57972 88.658 88.395 88.975 -7.6294E-06 301 36 11 0 0 0 5.0382E-16 2 48027 100.94 97.497 1 1.8745 1.5715 0 16742000 5573900 11168000 16153 1336 6112 6254 25171;25172 25171 IDYGEYMDK 9 1 0 Oxidation (M) _IDYGEYM(ox)DK_ IDYGEYM(1)DK IDYGEYM(54.98)DK 0 1 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.2434 2 575.242072 1148.46959 81650.88 0.71284 0.00041005 -0.0059768 -3.4381E-06 0.70686 0.00040662 575.242141242442 579.24906655581 36.21 0.82057 36.21 35.793 36.613 0 283 78 5 0 0 0 0.0073665 2 18329 54.982 54.982 1 1.0793 1.0667 0 25678000 11727000 13950000 16154 666 6113 6255 25173;25174 25174 518 IDYGEYMDK 9 1 0 Oxidation (M) _IDYGEYM(ox)DK_ IDYGEYM(1)DK IDYGEYM(65.22)DK 0 1 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.2432 2 575.242072 1148.46959 80431.22 1.3986 0.00080454 -0.081432 -4.6843E-05 1.3172 0.0007577 575.241976811103 579.249008877728 35.329 0.71311 35.329 35.049 35.762 3.8147E-06 205 64 4 0 0 0 0.0029214 2 18059 65.224 65.224 1 1.065 1.1215 0 19811000 10387000 9423200 16155 666 6113 6255 25175;25176 25176 518 IDYIAGLDSR 10 0 1 Unmodified _IDYIAGLDSR_ 0 0 0 H3BQB1;P07741;H3BQF1 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.7967 2 561.793121 1121.57169 NaN NaN NaN -0.87202 -0.00048989 NaN NaN NaN NaN 78.243 0.80653 78.243 77.813 78.619 0 0 0 0 0.0044399 2 46077 72.643 50.793 1 NaN NaN 0 32745000 0 32745000 16156 1302 6114 6256 25177;25178 25177 IDYIAGLDSR 10 0 1 Unmodified _IDYIAGLDSR_ 0 0 0 H3BQB1;P07741;H3BQF1 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.7935 2 561.793121 1121.57169 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.142 1 78.142 77.642 78.642 0 0 0 0 0.0069046 1 46228 61.593 37.439 1 16157 1302 6114 6256 25179 25179 IDYIAGLDSR 10 0 1 Unmodified _IDYIAGLDSR_ 0 0 0 H3BQB1;P07741;H3BQF1 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.7969 2 561.793121 1121.57169 NaN NaN NaN -0.71969 -0.00040432 NaN NaN NaN NaN 77.241 0.77853 77.241 76.871 77.65 0 0 0 0 0.00067121 1 46566 90.15 58.847 1 NaN NaN 0 33564000 0 33564000 16158 1302 6114 6256 25180 25180 IDYIAGLDSR 10 0 1 Unmodified _IDYIAGLDSR_ 0 0 0 H3BQB1;P07741;H3BQF1 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.7935 2 561.793121 1121.57169 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.269 1 77.269 76.769 77.769 0 0 0 0 0.0041025 1 46719 65.305 32.95 1 16159 1302 6114 6256 25181 25181 IDYIAGLDSR 10 0 1 Unmodified _IDYIAGLDSR_ 0 0 0 H3BQB1;P07741;H3BQF1 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.7977 2 561.793121 1121.57169 NaN NaN NaN -0.55904 -0.00031407 NaN NaN NaN NaN 89.114 0.70306 89.114 88.723 89.426 0 0 0 0 0.013783 1 49229 59.426 43.764 1 NaN NaN 0 2211700 0 2211700 16160 1302 6114 6256 25182 25182 IDYIAGLDSR 10 0 1 Unmodified _IDYIAGLDSR_ 0 0 0 H3BQB1;P07741;H3BQF1 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.798 2 561.793121 1121.57169 NaN NaN NaN -0.1244 -6.9887E-05 NaN NaN NaN NaN 89.17 0.62348 89.17 88.839 89.463 0 0 0 0 0.0050896 1 48366 70.1 59.869 1 NaN NaN 0 1546800 0 1546800 16161 1302 6114 6256 25183 25183 IEAGYIQTGDR 11 0 1 Unmodified _IEAGYIQTGDR_ 0 0 0 Q9NSX9;B7Z1K2;B7Z524;H0YDX7;J3QT46;D9YZV0;B3KNB9;A8K9E1;Q9Y450;H0YES5 Q9NSX9 Q9NSX9 DKFZp434G247;HBS1L HBS1-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.8058 2 611.806759 1221.59897 74063.73 0.55497 0.00033953 -0.6725 -0.00041144 -0.11753 -7.1904E-05 611.8064541757 616.810636518018 42.862 0.46182 42.862 42.573 43.035 0 102 37 5 0 0 0 0.0080859 3 23134 51.436 19.502 1 1.3666 1.3613 0 16489000 7515600 8973700 16162 784 6115 6257 25184;25185;25186 25186 IEAINQAIANEYEVR 15 0 1 Unmodified _IEAINQAIANEYEVR_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;B4DT23;B4DY25 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.4531 2 866.946858 1731.87916 66621 0.72162 0.00062561 -0.3305 -0.00028653 0.39112 0.00033908 866.946663599544 871.950749741413 88.985 0.5699 88.985 88.68 89.25 0 206 42 8 0 0 0 4.7557E-22 2 53600 144.57 128.32 1 1.3805 1.4681 0 42902000 17634000 25268000 16163 1324 6116 6258 25187;25188 25187 IEAINQAIANEYEVR 15 0 1 Unmodified _IEAINQAIANEYEVR_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;B4DT23;B4DY25 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.9523 2 866.946858 1731.87916 67284.55 0.67439 0.00058466 -0.23802 -0.00020635 0.43637 0.00037831 867.448223315207 871.950883969858 87.966 0.39268 87.966 87.817 88.21 0 137 32 6 0 0 0 1.0954E-10 3 54219 129.71 114.17 1 1.321 1.5044 0 49450000 20594000 28856000 16164 1324 6116 6258 25189;25190;25191 25189 IEALQNHENESVYK 14 1 0 Unmodified _IEALQNHENESVYK_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.9211 2 837.410108 1672.80566 67961.04 0.76548 0.00064102 0.096914 8.1157E-05 0.86239 0.00072217 837.410103658213 841.417167483057 36.224 0.26953 36.224 36.096 36.365 3.8147E-06 116 24 6 0 0 0 1.1583E-05 1 18239 110.08 110.08 1 1.1003 1.1849 0 33519000 17209000 16310000 16165 769 6117 6259 25192 25192 IEALQNHENESVYK 14 1 0 Unmodified _IEALQNHENESVYK_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.2805 3 558.609164 1672.80566 80033.95 0.71004 0.00039664 -0.55478 -0.0003099 0.15526 8.6732E-05 558.60875144756 561.280351387113 36.217 0.45205 36.217 36.042 36.494 0 240 41 8 0 0 0 2.2592E-10 2 18255 122.64 122.64 1 1.1188 1.2637 0 107340000 49641000 57704000 16166 769 6117 6259 25193;25194 25194 IEALQNHENESVYK 14 1 0 Unmodified _IEALQNHENESVYK_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.4116 2 837.410108 1672.80566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.369 1 36.369 35.869 36.869 3.8147E-06 0 0 0 1.8947E-06 1 18382 98.105 71.591 1 16167 769 6117 6259 25195 25195 IEALQNHENESVYK 14 1 0 Unmodified _IEALQNHENESVYK_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.616 3 558.609164 1672.80566 80225.46 0.89495 0.00049993 -0.2177 -0.00012161 0.67725 0.00037832 558.609046915092 561.280431945043 35.109 0.41476 35.109 34.939 35.354 0 220 37 9 0 0 0 1.1526E-06 2 17804 101.62 101.62 1 1.1572 1.3036 0 123370000 59561000 63809000 16168 769 6117 6259 25196;25197 25197 IEALQNHENESVYK 14 1 0 Unmodified _IEALQNHENESVYK_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 841.9194 2 837.410108 1672.80566 67530.07 0.96401 0.00080727 0.24191 0.00020257 1.2059 0.0010098 837.41027443113 841.417458823118 35.098 0.28671 35.098 34.988 35.275 0 108 25 6 0 0 0 3.0692E-14 2 17829 143.42 143.42 1 1.0978 1.1656 0 36091000 17356000 18735000 16169 769 6117 6259 25198;25199 25198 IEALQNHENESVYK 14 1 0 Unmodified _IEALQNHENESVYK_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.6092 3 558.609164 1672.80566 79864.39 0.40561 0.00022658 0.091238 5.0966E-05 0.49685 0.00027755 558.609182298454 561.280538858064 41.925 0.66458 41.925 41.694 42.359 0 326 51 10 0 0 0 0.0049702 2 19445 35.037 35.037 1 0.59832 0.4634 0 13168000 8865400 4302700 16170 769 6117 6259 25200;25201 25200 IEALQNHENESVYK 14 1 0 Unmodified _IEALQNHENESVYK_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.6094 3 558.609164 1672.80566 80849.04 0.27484 0.00015353 0.0063709 3.5588E-06 0.28122 0.00015709 558.609111543153 561.280492125454 42.147 0.71768 42.147 41.872 42.589 0 366 55 9 0 0 0 0.0094125 2 19054 30.961 30.961 1 0.61115 0.50202 0 9500500 5856000 3644400 16171 769 6117 6259 25202;25203 25203 IEANAGQLYLTGVVVLHK 18 1 0 Unmodified _IEANAGQLYLTGVVVLHK_ 0 0 0 B4DLS8;Q53GV6;B2R791;O43395;B4DM28 B4DLS8 B4DLS8 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.3719 3 642.366676 1924.0782 76093.07 0.79427 0.00051021 -0.22838 -0.0001467 0.56589 0.00036351 642.701211124992 645.372526602422 117.71 0.45917 117.71 117.46 117.92 -7.6294E-06 91 19 7 0 0 0 0.039282 1 69338 15.893 15.893 1 0.77216 0.63127 0 2620700 1716400 904320 16172 848 6118 6260 25204 25204 IEDFLER 7 0 1 Unmodified _IEDFLER_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.2416 2 461.23745 920.460347 87421.45 0.16227 7.4845E-05 -0.045996 -2.1215E-05 0.11627 5.363E-05 461.237376335826 466.241459940881 65.315 1.9332 65.315 64.741 66.675 0 885 170 9 0 0 0 0.013473 3 37433 102.71 48.188 1 0.89436 1.0582 0 322870000 163390000 159480000 16173 157 6119 6261 25205;25206;25207 25205 IEDFLER 7 0 1 Unmodified _IEDFLER_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.2377 2 461.23745 920.460347 NaN NaN NaN -0.015916 -7.341E-06 NaN NaN NaN NaN 64.048 1.6083 64.048 63.655 65.264 0 0 0 0 0.0010043 2 38027 117.93 50.94 1 NaN NaN 0 193900000 193900000 0 16174 157 6119 6261 25208;25209 25209 IEDFLER 7 0 1 Unmodified _IEDFLER_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.2375 2 461.23745 920.460347 89641.02 0.39046 0.00018009 -0.30582 -0.00014106 0.084637 3.9038E-05 461.237234408516 466.241386133905 74.561 2.1075 74.561 74.173 76.281 0 748 149 9 0 0 0 0.033901 3 39557 63.21 20.21 1 0.86569 0.74582 0 63179000 34529000 28651000 16175 157 6119 6261 25210;25211;25212 25211 IEDFLER 7 0 1 Unmodified _IEDFLER_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.2417 2 461.23745 920.460347 89657.09 0.031869 1.4699E-05 -0.15649 -7.2181E-05 -0.12462 -5.7482E-05 461.237317796429 466.241433669889 74.919 2.0055 74.919 74.556 76.562 0 578 136 8 0 0 0 0.051001 1 38891 54.611 11.611 1 0.82299 0.71807 0 56310000 31365000 24946000 16176 157 6119 6261 25213 25213 IEDLEEGQQVIR 12 0 1 Unmodified _IEDLEEGQQVIR_ 0 0 0 Q14008;Q8IYN5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.8757 2 714.870088 1427.72562 71849.56 0.97181 0.00069472 1.7198 0.0012294 2.6916 0.0019242 715.370505664774 719.87475948052 65.634 0.50677 65.634 65.416 65.923 0 200 45 7 0 0 0 0.00021042 2 37798 105.52 82.994 1 1.5058 1.5336 0 18561000 5981700 12579000 16177 1725 6120 6262 25214;25215 25214 IEDLEEGQQVIR 12 0 1 Unmodified _IEDLEEGQQVIR_ 0 0 0 Q14008;Q8IYN5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.8766 2 714.870088 1427.72562 70067.55 0.51207 0.00036606 0.66779 0.00047738 1.1799 0.00084345 715.37286409261 719.87462914918 75.947 0.62118 75.947 75.738 76.359 -7.6294E-06 91 40 4 0 0 0 0.0083025 2 39563 58.37 45.278 1 1.5829 1.4264 0 2048400 760670 1287700 16178 1725 6120 6262 25216;25217 25216 IEDLENEIEEVK 12 1 0 Unmodified _IEDLENEIEEVK_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5 B3KVZ3 B3KVZ3 CENPH Centromere protein H MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.372 2 730.361761 1458.70897 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.874 1 85.874 85.374 86.374 0 0 0 0 0.0011013 1 52916 72.006 45.491 1 16179 585 6121 6263 25218 25218 IEDLENEIEEVK 12 1 0 Unmodified _IEDLENEIEEVK_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5 B3KVZ3 B3KVZ3 CENPH Centromere protein H MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3616 2 730.361761 1458.70897 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.921 1 85.921 85.421 86.421 0 0 0 0 0.0075855 1 52952 60.255 24.311 1 16180 585 6121 6263 25219 25219 IEDLENEIEEVK 12 1 0 Unmodified _IEDLENEIEEVK_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5 B3KVZ3 B3KVZ3 CENPH Centromere protein H MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3624 2 730.361761 1458.70897 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.991 1 85.991 85.491 86.491 0 0 0 0 0.00094564 1 53010 73.951 39.259 1 16181 585 6121 6263 25220 25220 IEDLSQQAQLAAAEK 15 1 0 Unmodified _IEDLSQQAQLAAAEK_ 0 0 0 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;A0A024RB41;Q13765;E9PAV3;B4DDI8 F8W1N5 F8W1N5 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.9283 2 807.920309 1613.82606 NaN NaN NaN -0.065836 -5.319E-05 NaN NaN NaN NaN 66.848 0.57037 66.848 66.623 67.193 0 0 0 0 3.372E-17 1 38510 130.65 130.65 1 NaN NaN 0 23895000 0 23895000 16182 324 6122 6264 25221 25221 IEDLSQQAQLAAAEK 15 1 0 Unmodified _IEDLSQQAQLAAAEK_ 0 0 0 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;A0A024RB41;Q13765;E9PAV3;B4DDI8 F8W1N5 F8W1N5 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.4285 2 807.920309 1613.82606 NaN NaN NaN 0.50103 0.0004048 NaN NaN NaN NaN 65.886 0.61578 65.886 65.583 66.199 0 0 0 0 4.9267E-32 2 38907 149.41 133.52 1 NaN NaN 0 31638000 0 31638000 16183 324 6122 6264 25222;25223 25223 IEDLSQQAQLAAAEK 15 1 0 Unmodified _IEDLSQQAQLAAAEK_ 0 0 0 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;A0A024RB41;Q13765;E9PAV3;B4DDI8 F8W1N5 F8W1N5 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.928 2 807.920309 1613.82606 69409.38 0.44394 0.00035867 0.20498 0.00016561 0.64892 0.00052428 807.920193276054 811.927497313781 76.957 0.52187 76.957 76.697 77.219 0 165 32 7 0 0 0 0.00077845 1 41023 50.207 50.207 1 1.4443 1.1407 0 5262400 2358400 2904000 16184 324 6122 6264 25224 25224 IEDNNTLVFIVDVK 14 1 0 Unmodified _IEDNNTLVFIVDVK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.9465 2 809.93797 1617.86139 68236.26 0.87484 0.00070856 0.17095 0.00013846 1.0458 0.00084702 810.439665072875 813.944892927144 116.58 1.5482 116.58 116.18 117.72 -7.6294E-06 448 109 8 0 0 0 0.00011813 3 74310 82.171 82.171 1 0.545 0.59189 0 46449000 28546000 17903000 16185 796 6123 6265 25225;25226;25227 25225 IEDNNTLVFIVDVK 14 1 0 Unmodified _IEDNNTLVFIVDVK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.9377 2 809.93797 1617.86139 67670.96 1.1343 0.00091873 -0.026098 -2.1138E-05 1.1082 0.00089759 809.937962345755 813.945020103587 128.34 1.6195 128.34 127.98 129.6 0 329 72 10 0 0 0 0.00013865 2 77357 78.692 78.692 1 0.83889 0.68292 0 31087000 17174000 13912000 16186 796 6123 6265 25228;25229 25229 IEDNNTLVFIVDVK 14 1 0 Unmodified _IEDNNTLVFIVDVK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 810.4398 2 809.93797 1617.86139 68024.05 0.82001 0.00066415 0.13867 0.00011231 0.95867 0.00077647 809.938158085546 813.945061836385 128.12 0.76991 128.12 127.82 128.59 0 206 32 9 0 0 0 0.00021997 2 76332 66.498 66.498 1 0.97751 0.80225 0 27561000 15064000 12496000 16187 796 6123 6265 25230;25231 25231 IEDRLPELEQLER 13 0 2 Unmodified _IEDRLPELEQLER_ 0 0 1 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.9655 3 547.293176 1638.8577 81373.3 0.7223 0.00039531 0.36965 0.00020231 1.0919 0.00059762 547.293278922266 553.965513361236 86.272 0.91739 86.272 85.846 86.763 0 364 72 8 0 0 0 3.2082E-14 2 51785 124.09 88.891 1 0.98553 1.0732 0 80917000 38697000 42219000 16188 925 6124 6266 25232;25233 25233 IEDRLPELEQLER 13 0 2 Unmodified _IEDRLPELEQLER_ 0 0 1 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.9657 3 547.293176 1638.8577 80398.6 0.80497 0.00044055 -0.027264 -1.4921E-05 0.77771 0.00042563 547.293355079828 553.965284319873 84.923 0.94044 84.923 84.611 85.552 0 363 79 6 0 0 0 4.1915E-05 2 52264 89.507 54.303 1 1.0066 1.1579 0 58175000 25816000 32359000 16189 925 6124 6266 25234;25235 25235 IEDRLPELEQLER 13 0 2 Unmodified _IEDRLPELEQLER_ 0 0 1 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.9662 3 547.293176 1638.8577 80315.77 0.51796 0.00028348 -0.72783 -0.00039833 -0.20987 -0.00011486 547.626833181685 553.965344546956 98.524 1.058 98.524 98.169 99.227 -7.6294E-06 285 61 8 0 0 0 0.0052546 2 55452 47.242 26.579 1 1.5194 1.2709 0 14503000 6141700 8361200 16190 925 6124 6266 25236;25237 25236 IEDSGENLETEPLESQDR 18 0 1 Unmodified _IEDSGENLETEPLESQDR_ 0 0 0 P78345 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1030.9642 2 1030.96637 2059.91819 NaN NaN NaN 0.50855 0.00052429 NaN NaN NaN NaN 65.071 0.069351 65.071 65.026 65.095 -7.6294E-06 0 0 0 0.041424 1 37449 46.069 40.227 1 NaN NaN 0 2079600 2079600 0 16191 1662 6125 6267 25238 25238 IEDSGENLETEPLESQDR 18 0 1 Unmodified _IEDSGENLETEPLESQDR_ 0 0 0 P78345 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1035.9689 2 1030.96637 2059.91819 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.033 1 65.033 64.533 65.533 0 0 0 0 0.043505 1 37425 37.594 30.712 1 16192 1662 6125 6267 25239 25239 IEDSGENLETEPLESQDR 18 0 1 Unmodified _IEDSGENLETEPLESQDR_ 0 0 0 P78345 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1030.9681 2 1030.96637 2059.91819 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.254 1 65.254 64.754 65.754 0 0 0 0 6.8841E-06 1 37571 107.99 101.96 1 16193 1662 6125 6267 25240 25240 IEDSTGLNRPGPAPLSSR 18 0 2 Unmodified _IEDSTGLNRPGPAPLSSR_ 0 0 1 Q9BQ70;Q9H7D3;H3BSP8;H3BTU3;H3BQ53;H3BS87;H3BMJ8 Q9BQ70 Q9BQ70 TCF25 Transcription factor 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.3283 3 622.993789 1865.95954 78515.7 0.68339 0.00042575 0.10005 6.2333E-05 0.78344 0.00048808 623.32793960801 629.665977012803 49.262 0.47356 49.262 48.955 49.429 0 128 34 5 0 0 0 0.00012454 1 26991 33.836 33.836 1 1.3797 1.4918 0 20893000 8889800 12004000 16194 1996 6126 6268 25241 25241 IEDVGSDEEDDSGK 14 1 0 Unmodified _IEDVGSDEEDDSGK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF8 B4DMA2;Q58FF8 B4DMA2 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.8082 2 747.807547 1493.60054 70520.99 0.80197 0.00059972 0.11889 8.8907E-05 0.92086 0.00068863 747.807533516537 751.814723408071 22.322 0.79447 22.322 22.074 22.869 0 236 47 9 0 0 0 1.5063E-29 2 8376 153.95 153.69 1 2.8136 3.18 0 105430000 27422000 78011000 16195 379;1800 6127 6269 25242;25243 25243 IEDVGSDEEDDSGK 14 1 0 Unmodified _IEDVGSDEEDDSGK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF8 B4DMA2;Q58FF8 B4DMA2 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.815 2 747.807547 1493.60054 70990.73 0.61841 0.00046245 -0.11541 -8.6301E-05 0.503 0.00037615 747.807272881418 751.814507438398 22.153 0.26789 22.153 22.041 22.309 0 45 12 5 0 0 0 2.437E-14 2 8169 130.1 129.41 1 2.7139 2.7743 0 11942000 2585400 9356700 16196 379;1800 6127 6269 25244;25245 25244 IEDVGSDEEDDSGK 14 1 0 Unmodified _IEDVGSDEEDDSGK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF8 B4DMA2;Q58FF8 B4DMA2 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.817 2 747.807547 1493.60054 70210.42 0.67521 0.00050493 0.27907 0.00020869 0.95428 0.00071362 747.807504226797 751.81519503057 24.964 0.60314 24.964 24.595 25.198 0 130 32 7 0 0 0 0.0013034 2 8898 54.65 48.41 1 1.8839 1.4866 0 4087900 1465600 2622400 16197 379;1800 6127 6269 25246;25247 25246 IEDVPAPSTSADK 13 1 0 Unmodified _IEDVPAPSTSADK_ 0 0 0 Q53H03;P49321;E9PI86;O95138;Q5T626;Q6PJY7;Q5T624;E9PRH9;E9PPR5;E9PQG5;E9PAU3;E9PKR5;E9PNB5 Q53H03 Q53H03 NASP Nuclear autoantigenic sperm protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.84 2 665.330264 1328.64598 NaN NaN NaN 0.18187 0.00012101 NaN NaN NaN NaN 39.952 0.54562 39.952 39.695 40.24 0 0 0 0 0.0043798 2 21420 61.65 35.136 1 NaN NaN 0 8388600 0 8388600 16198 1579 6128 6270 25248;25249 25249 IEDVTPIPSDSTR 13 0 1 Unmodified _IEDVTPIPSDSTR_ 0 0 0 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.366 2 715.362096 1428.70964 71941.91 0.67428 0.00048235 -0.21384 -0.00015297 0.46044 0.00032938 715.362005045662 720.366031742647 63.024 1.6418 63.024 62.459 64.101 0 951 160 11 0 0 0 1.8374E-13 4 36401 130.1 130.1 1 0.85859 1.0197 0 895670000 463660000 432010000 16199 1638 6129 6271 25250;25251;25252;25253 25253 IEDVTPIPSDSTR 13 0 1 Unmodified _IEDVTPIPSDSTR_ 0 0 0 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.3667 2 715.362096 1428.70964 71810.74 0.61996 0.00044349 -0.16237 -0.00011616 0.45759 0.00032734 715.362059057117 720.366042933694 62.021 1.972 62.021 61.439 63.411 0 1169 178 10 0 0 0 6.9464E-14 5 36565 134.98 122.77 1 0.85394 1.0026 0 850390000 459180000 391200000 16200 1638 6129 6271 25254;25255;25256;25257;25258 25256 IEDVTPIPSDSTR 13 0 1 Unmodified _IEDVTPIPSDSTR_ 0 0 0 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.3626 2 715.362096 1428.70964 71418.9 0.58806 0.00042068 -0.19413 -0.00013887 0.39393 0.0002818 715.362060841159 720.366066683013 72.248 2.7191 72.248 71.622 74.341 -7.6294E-06 1030 199 11 0 0 0 8.5065E-06 4 38358 101.95 95.351 1 1.0981 0.9541 0 247860000 118060000 129800000 16201 1638 6129 6271 25259;25260;25261;25262 25262 IEDVTPIPSDSTR 13 0 1 Unmodified _IEDVTPIPSDSTR_ 0 0 0 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.3623 2 715.362096 1428.70964 NaN NaN NaN 0.24667 0.00017646 NaN NaN NaN NaN 73.465 1.5758 73.465 73.313 74.889 0 0 0 0 0.051249 1 39054 54.486 34.183 1 NaN NaN 0 1917800 1917800 0 16202 1638 6129 6271 25263 25263 IEDVTPIPSDSTR 13 0 1 Unmodified _IEDVTPIPSDSTR_ 0 0 0 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.3658 2 715.362096 1428.70964 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.424 1 73.424 72.924 73.924 0 0 0 0 0.0033135 1 38861 64.439 42.353 1 16203 1638 6129 6271 25264 25264 IEDVTPIPSDSTR 13 0 1 Unmodified _IEDVTPIPSDSTR_ 0 0 0 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.3668 2 715.362096 1428.70964 71266.57 0.49453 0.00035377 -0.11645 -8.3303E-05 0.37808 0.00027047 715.362205377311 720.366080649418 72.773 3.0642 72.773 72.3 75.364 0 1241 222 11 0 0 0 7.8857E-09 6 37907 117.25 117.25 1 1.1547 1.0086 0 221040000 103790000 117250000 16204 1638 6129 6271 25265;25266;25267;25268;25269;25270 25268 IEDVTPIPSDSTRR 14 0 2 Unmodified _IEDVTPIPSDSTRR_ 0 0 1 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.9497 3 529.277526 1584.81075 81971.87 0.46237 0.00024472 0.062763 3.3219E-05 0.52513 0.00027794 529.277337424962 535.949666671637 56.466 0.73068 56.466 56.12 56.85 0 212 45 8 0 0 0 0.0092126 3 28387 29.217 29.217 1 1.3002 1.109 0 6870900 2696000 4174900 16205 1638 6130 6272 25271;25272;25273 25271 IEDVTPIPSDSTRR 14 0 2 Unmodified _IEDVTPIPSDSTRR_ 0 0 1 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.9505 3 529.277526 1584.81075 82478.41 0.55166 0.00029198 -0.056834 -3.0081E-05 0.49482 0.0002619 529.277317670227 535.949618719786 56.998 0.65754 56.998 56.68 57.337 0 227 44 7 0 0 0 0.008535 2 28052 29.981 29.981 1 1.331 1.2068 0 5434300 2380800 3053500 16206 1638 6130 6272 25274;25275 25274 IEDYFPEFAR 10 0 1 Unmodified _IEDYFPEFAR_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;B0AZR9;Q14455;A0A0A0MR13;O60726 Q5FWY2 Q5FWY2 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.8068 2 643.806228 1285.5979 NaN NaN NaN 0.31918 0.00020549 NaN NaN NaN NaN 98.689 0.59518 98.689 98.401 98.996 0 0 0 0 0.0059051 1 60302 67.563 35.628 1 NaN NaN 0 4477000 4477000 0 16207 549 6131 6273 25276 25276 IEDYFPEFAR 10 0 1 Unmodified _IEDYFPEFAR_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;B0AZR9;Q14455;A0A0A0MR13;O60726 Q5FWY2 Q5FWY2 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.308 2 643.806228 1285.5979 NaN NaN NaN 0.46208 0.00029749 NaN NaN NaN NaN 97.925 0.57719 97.925 97.624 98.201 0 0 0 0 0.020051 1 61163 54.608 25.521 1 NaN NaN 0 4214900 4214900 0 16208 549 6131 6273 25277 25277 IEEALMDPGRQPESADDFDR 20 0 2 Oxidation (M) _IEEALM(ox)DPGRQPESADDFDR_ IEEALM(1)DPGRQPESADDFDR IEEALM(109.03)DPGRQPESADDFDR 0 1 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.0133 3 769.677978 2306.0121 68922.78 0.66929 0.00051514 0.041027 3.1577E-05 0.71032 0.00054671 770.347099284387 776.684593444373 60.862 0.71533 60.862 60.597 61.312 0 320 53 8 0 0 0 9.6272E-14 3 34717 109.03 104.92 1 1.2385 1.3459 0 40679000 16977000 23702000 16209 1741 6132 6274 25278;25279;25280 25279 1581 IEEALMDPGRQPESADDFDR 20 0 2 Oxidation (M) _IEEALM(ox)DPGRQPESADDFDR_ IEEALM(1)DPGRQPESADDFDR IEEALM(85.97)DPGRQPESADDFDR 0 1 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.0134 3 769.677978 2306.0121 67879.66 0.66293 0.00051024 -0.047904 -3.687E-05 0.61503 0.00047337 770.012402068936 776.350209646418 59.849 0.65585 59.849 59.556 60.212 0 295 52 7 0 0 0 4.2083E-08 1 34931 85.974 82.022 1 1.2871 1.4801 0 57293000 25553000 31740000 16210 1741 6132 6274 25281 25281 1581 IEEALMDPGRQPESADDFDR 20 0 2 Unmodified _IEEALMDPGRQPESADDFDR_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.6813 3 764.34634 2290.01719 69840.85 0.59015 0.00045108 -0.31152 -0.00023811 0.27863 0.00021297 764.680500157915 771.018369559369 85.492 0.55497 85.492 85.239 85.794 0 131 34 7 0 0 0 0.0023558 2 46765 28.65 25.684 1 1.8266 1.6206 0 3913800 1272600 2641200 16211 1741 6132 6275 25282;25283 25282 IEEALMDPGRQPESADDFDR 20 0 2 Unmodified _IEEALMDPGRQPESADDFDR_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 771.0197 3 764.34634 2290.01719 69845.45 0.76976 0.00058836 -0.4855 -0.00037109 0.28426 0.00021728 764.34602255345 771.018362916306 85.673 0.53725 85.673 85.431 85.968 0 115 31 6 0 0 0 0.0012235 2 46022 32.797 25.38 1 1.5572 1.4072 0 2933100 1651200 1281900 16212 1741 6132 6275 25284;25285 25284 IEEDFPHIR 9 0 1 Unmodified _IEEDFPHIR_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 385.8643 3 385.864617 1154.57202 100242.6 0.18669 7.2036E-05 -0.19725 -7.6112E-05 -0.010563 -4.0761E-06 385.864470256936 389.200674888595 57.679 0.44651 57.679 57.406 57.853 0 118 36 5 0 0 0 0.0099677 1 32598 38.303 27.09 1 0.63138 0.66103 0 12681000 7078800 5602200 16213 2069 6133 6276 25286 25286 IEEDFPHIR 9 0 1 Unmodified _IEEDFPHIR_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 385.8644 3 385.864617 1154.57202 97133.75 0.067657 2.6107E-05 -0.3069 -0.00011842 -0.23924 -9.2314E-05 385.864404188665 389.200535619652 56.428 0.38155 56.428 56.169 56.551 0 94 27 5 0 0 0 0.0063362 2 32477 41.876 30.01 1 0.60687 0.60772 0 17142000 10052000 7090600 16214 2069 6133 6276 25287;25288 25287 IEEGTYGVVYR 11 0 1 Unmodified _IEEGTYGVVYR_ 0 0 0 Q96CA8;Q6P5Y5;Q4VBY6;A4VCI5;Q5QPR4;J3QR29;B4E3D9;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127;B4E0M9;B4E0N4 Q96CA8 Q96CA8 CDC2L2;CDC2L1;CDK11A;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.3261 2 643.324785 1284.63502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.851 1 57.851 57.351 58.351 0 0 0 0 0.019486 1 33532 53.751 23.584 1 16215 520 6134 6277 25289 25289 IEEIPLDQVDIDK 13 1 0 Unmodified _IEEIPLDQVDIDK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.4044 2 763.901054 1525.78755 69497.24 0.88675 0.00067739 0.73057 0.00055808 1.6173 0.0012355 763.901316477285 767.908386581383 98.664 0.75854 98.664 98.386 99.145 7.6294E-06 267 62 6 0 0 0 0.0085865 2 60232 43.77 43.77 1 0.7028 0.7547 0 39400000 21046000 18354000 16216 1954 6135 6278 25290;25291 25291 IEEIPLDQVDIDK 13 1 0 Unmodified _IEEIPLDQVDIDK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.4111 2 763.901054 1525.78755 70343.73 0.7258 0.00055444 0.7972 0.00060898 1.523 0.0011634 763.901406968788 767.90835856687 98.03 0.70348 98.03 97.711 98.415 0 276 61 6 0 0 0 0.021582 1 61172 35.414 29.093 1 0.67655 0.7459 0 43587000 25998000 17589000 16217 1954 6135 6278 25292 25292 IEELEALLQEAR 12 0 1 Unmodified _IEELEALLQEAR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.3871 2 707.382831 1412.75111 72576.53 0.96508 0.00068268 -0.040146 -2.8399E-05 0.92493 0.00065428 707.382875404193 712.386852799135 113.7 0.82682 113.7 113.39 114.21 7.6294E-06 319 60 8 0 0 0 3.7811E-29 2 71979 164.64 164.64 1 0.64072 0.70946 0 62389000 36780000 25609000 16218 1421 6136 6279 25293;25294 25294 IEELEALLQEAR 12 0 1 Unmodified _IEELEALLQEAR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3826 2 707.382831 1412.75111 NaN NaN NaN -0.81974 -0.00057987 NaN NaN NaN NaN 114.26 0.59929 114.26 114 114.6 0 0 0 0 0.0054457 1 72491 73.067 35.875 1 NaN NaN 0 4986900 4986900 0 16219 1421 6136 6279 25295 25295 IEELEALLQEAR 12 0 1 Unmodified _IEELEALLQEAR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.3831 2 707.382831 1412.75111 73267.19 0.70709 0.00050018 0.3335 0.00023591 1.0406 0.0007361 707.38294532988 712.387227639261 113.13 1.1333 113.13 112.77 113.9 7.6294E-06 349 78 8 0 0 0 1.6369E-22 4 73207 152.07 152.07 1 0.67536 0.75121 0 43397000 25486000 17911000 16220 1421 6136 6279 25296;25297;25298;25299 25296 IEELEALLQEAR 12 0 1 Unmodified _IEELEALLQEAR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.3834 2 707.382831 1412.75111 72973.19 0.91268 0.00064561 0.33224 0.00023502 1.2449 0.00088063 707.382890953776 712.387051376962 125.45 1.3358 125.45 125.09 126.42 7.6294E-06 262 53 8 0 0 0 0.00018493 4 75153 75.695 69.503 1 1.2388 1.0341 0 23356000 10591000 12764000 16221 1421 6136 6279 25300;25301;25302;25303 25300 IEELEALLQEAR 12 0 1 Unmodified _IEELEALLQEAR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.388 2 707.382831 1412.75111 73257.73 0.76887 0.00054389 0.22186 0.00015694 0.99073 0.00070082 707.382906684661 712.386989758374 125.25 1.1268 125.25 124.97 126.1 0 228 50 8 0 0 0 2.2009E-13 4 74379 136.49 101.77 1 1.1069 0.92644 0 16478000 8085200 8393100 16222 1421 6136 6279 25304;25305;25306;25307 25306 IEELEALLQEAR 12 0 1 Unmodified _IEELEALLQEAR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.3869 2 707.382831 1412.75111 73119.3 0.65966 0.00046663 -0.95424 -0.00067501 -0.29458 -0.00020838 707.382196626647 712.385471644451 126.28 0.83487 126.28 126.05 126.89 0 63 36 4 0 0 0 0.004055 1 74954 54.471 54.471 1 1.2856 1.1542 0 2001500 823660 1177900 16223 1421 6136 6279 25308 25308 IEELLSGENR 10 0 1 Unmodified _IEELLSGENR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.32 2 580.30131 1158.58807 77288.56 0.66231 0.00038434 0.34238 0.00019868 1.0047 0.00058302 580.301786706097 585.305795051941 51.605 0.77377 51.605 51.162 51.936 0 330 69 7 0 0 0 0.046819 1 28319 62.823 17.662 1 0.99887 1.1065 0 63616000 36814000 26802000 16224 2081 6137 6280 25309 25309 IEELLSGENR 10 0 1 Unmodified _IEELLSGENR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.3041 2 580.30131 1158.58807 78819.52 0.64806 0.00037607 0.22085 0.00012816 0.86891 0.00050423 580.301447220981 585.305380235663 50.382 0.69525 50.382 49.939 50.634 0 305 62 6 0 0 0 0.0038105 1 28568 62.823 16.665 1 1.0315 1.1868 0 74941000 35016000 39925000 16225 2081 6137 6280 25310 25310 IEELQLIVNDK 11 1 0 Unmodified _IEELQLIVNDK_ 0 0 0 Q59GS3;A0A140VJS3;P62195;J3QLH6;J3KRP2;J3QSA9;J3QQM1;J3QSE0 Q59GS3 Q59GS3 PSMC5 26S protease regulatory subunit 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.3773 2 657.369192 1312.72383 NaN NaN NaN 0.19437 0.00012777 NaN NaN NaN NaN 94.202 0.30968 94.202 94.004 94.314 0 0 0 0 7.1656E-08 1 57137 108.43 49.616 1 NaN NaN 0 13753000 0 13753000 16226 608 6138 6281 25311 25311 IEELQLIVNDK 11 1 0 Unmodified _IEELQLIVNDK_ 0 0 0 Q59GS3;A0A140VJS3;P62195;J3QLH6;J3KRP2;J3QSA9;J3QQM1;J3QSE0 Q59GS3 Q59GS3 PSMC5 26S protease regulatory subunit 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.3682 2 657.369192 1312.72383 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.165 1 94.165 93.665 94.665 7.6294E-06 0 0 0 0.051702 1 57179 43.297 4.9936 1 16227 608 6138 6281 25312 25312 IEELQLIVNDK 11 1 0 Unmodified _IEELQLIVNDK_ 0 0 0 Q59GS3;A0A140VJS3;P62195;J3QLH6;J3KRP2;J3QSA9;J3QQM1;J3QSE0 Q59GS3 Q59GS3 PSMC5 26S protease regulatory subunit 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.3782 2 657.369192 1312.72383 NaN NaN NaN 0.66172 0.000435 NaN NaN NaN NaN 93.176 0.56921 93.176 92.945 93.514 0 0 0 0 5.7361E-05 1 57917 98.254 69.856 1 NaN NaN 0 7680800 0 7680800 16228 608 6138 6281 25313 25313 IEENSLKEEESIEGEK 16 2 0 Unmodified _IEENSLKEEESIEGEK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.6332 3 621.633704 1861.87928 78517.93 0.79984 0.00049721 -0.28389 -0.00017648 0.51595 0.00032073 621.633131309827 626.97619655008 42.723 0.45465 42.723 42.57 43.024 0 168 37 6 0 0 0 6.9746E-05 1 22851 62.646 15.9 1 0.8339 0.98267 0 14587000 6815100 7771700 16229 515 6139 6282 25314 25314 IEENSLKEEESIEGEK 16 2 0 Unmodified _IEENSLKEEESIEGEK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.9767 3 621.633704 1861.87928 77285.6 0.52093 0.00032383 -0.069005 -4.2896E-05 0.45193 0.00028093 621.968031905206 626.97650473553 41.814 0.43441 41.814 41.581 42.015 0 156 38 6 0 0 0 3.5295E-05 2 22489 81.428 81.428 1 0.82475 0.94728 0 22964000 10952000 12012000 16230 515 6139 6282 25315;25316 25315 IEENSLKEEESIEGEK 16 2 0 Unmodified _IEENSLKEEESIEGEK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.9485 2 931.946918 1861.87928 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.766 1 41.766 41.266 42.266 3.8147E-06 0 0 0 0.0026715 1 22472 57.804 44.141 1 16231 515 6139 6282 25317 25317 IEENSLKEEESIEGEK 16 2 0 Unmodified _IEENSLKEEESIEGEK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.311 3 621.633704 1861.87928 76321.98 0.38991 0.00024238 0.10427 6.4816E-05 0.49418 0.0003072 621.96820705372 627.310778052528 50.723 1.0448 50.723 50.398 51.442 0 386 72 10 0 0 0 0.0012732 2 24800 39.531 39.531 1 2.5591 2.1823 0 19459000 5452600 14007000 16232 515 6139 6282 25318;25319 25318 IEENSLKEEESIEGEK 16 2 0 Unmodified _IEENSLKEEESIEGEK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.3102 3 621.633704 1861.87928 75903.85 0.28891 0.00017959 -0.072749 -4.5223E-05 0.21616 0.00013437 621.968040157724 626.976531405561 51.251 1.2678 51.251 50.625 51.893 0 376 86 10 0 0 0 0.0012323 1 24559 39.91 39.91 1 2.4378 2.0633 0 14552000 3990400 10562000 16233 515 6139 6282 25320 25320 IEESDQGPYAIILAPTR 17 0 1 Unmodified _IEESDQGPYAIILAPTR_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 937.4923 2 936.988723 1871.96289 NaN NaN NaN -0.71199 -0.00066713 NaN NaN NaN NaN 107.67 0.25011 107.67 107.47 107.72 7.6294E-06 0 0 0 0.0061157 3 66997 64.65 53.438 1 NaN NaN 0 3226400 3226400 0 16234 63 6140 6283 25321;25322;25323 25322 IEESDQGPYAIILAPTR 17 0 1 Unmodified _IEESDQGPYAIILAPTR_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 936.9858 2 936.988723 1871.96289 NaN NaN NaN -0.63875 -0.0005985 NaN NaN NaN NaN 107.04 0.31558 107.04 106.88 107.19 0 0 0 0 0.0079666 1 68184 60.401 50.968 1 NaN NaN 0 5175600 5175600 0 16235 63 6140 6283 25324 25324 IEESITEDLSLADLMPR 17 0 1 Oxidation (M) _IEESITEDLSLADLM(ox)PR_ IEESITEDLSLADLM(1)PR IEESITEDLSLADLM(55.26)PR 0 1 0 P42285;A8K6I4;H0Y8U3 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.9456 2 974.482613 1946.95067 61240.64 0.45483 0.00044322 -1.1124 -0.0010841 -0.65761 -0.00064083 974.983910337177 979.483134298035 117.34 0.52654 117.34 117.02 117.55 7.6294E-06 151 38 7 0 0 0 0.0030924 1 74995 55.261 55.261 1 1.2056 1.216 0 17617000 7918300 9699100 16236 1563 6141 6284 25325 25325 1317 IEEVLSGVLDTELR 14 0 1 Unmodified _IEEVLSGVLDTELR_ 0 0 0 P18583;D3DSF7;Q6ZRV7;J3QSZ5;Q3SWV4;A0JLP4 P18583 P18583 SON Protein SON ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.9327 2 786.927603 1571.84065 NaN NaN NaN 2.3101 0.0018179 NaN NaN NaN NaN 113.95 0.91131 113.95 113.27 114.19 0 0 0 0 3.3493E-05 1 72112 91.937 36.388 1 NaN NaN 0 7805100 0 7805100 16237 1499 6142 6285 25326 25326 IEEVLSGVLDTELR 14 0 1 Unmodified _IEEVLSGVLDTELR_ 0 0 0 P18583;D3DSF7;Q6ZRV7;J3QSZ5;Q3SWV4;A0JLP4 P18583 P18583 SON Protein SON ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.4329 2 786.927603 1571.84065 NaN NaN NaN 0.50441 0.00039693 NaN NaN NaN NaN 113.39 0.59077 113.39 113.17 113.76 0 0 0 0 3.8827E-06 3 73480 97.214 51.582 1 NaN NaN 0 6762400 0 6762400 16238 1499 6142 6285 25327;25328;25329 25329 IEEVLSGVLDTELR 14 0 1 Unmodified _IEEVLSGVLDTELR_ 0 0 0 P18583;D3DSF7;Q6ZRV7;J3QSZ5;Q3SWV4;A0JLP4 P18583 P18583 SON Protein SON ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.9333 2 786.927603 1571.84065 NaN NaN NaN 1.5005 0.0011807 NaN NaN NaN NaN 125.15 0.59483 125.15 124.92 125.52 0 0 0 0 0.0048629 1 75224 57.175 26.611 1 NaN NaN 0 1653300 0 1653300 16239 1499 6142 6285 25330 25330 IEEVPELPLVVEDK 14 1 0 Unmodified _IEEVPELPLVVEDK_ 0 0 0 P36578;Q59GY2;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.9404 2 804.940179 1607.8658 68110.5 0.65653 0.00052847 0.024002 1.932E-05 0.68053 0.00054779 804.940401708703 808.947200898896 114.4 1.5342 114.4 114.03 115.56 7.6294E-06 762 104 13 0 0 0 0.00010959 5 72389 83.617 83.617 1 0.91936 1.1052 0 1184200000 615920000 568250000 16240 1548 6143 6286 25331;25332;25333;25334;25335 25332 IEEVPELPLVVEDK 14 1 0 Unmodified _IEEVPELPLVVEDK_ 0 0 0 P36578;Q59GY2;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.9472 2 804.940179 1607.8658 67908.76 0.54759 0.00044078 0.067223 5.411E-05 0.61481 0.00049489 804.940431857804 808.947234584742 113.85 1.2786 113.85 113.48 114.76 7.6294E-06 743 89 12 0 0 0 0.00013865 4 73730 78.692 78.692 1 0.90228 1.0654 0 1081100000 561920000 519130000 16241 1548 6143 6286 25336;25337;25338;25339 25336 IEEVPELPLVVEDK 14 1 0 Unmodified _IEEVPELPLVVEDK_ 0 0 0 P36578;Q59GY2;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 808.9498 2 804.940179 1607.8658 67908.3 0.86198 0.00069385 0.18345 0.00014767 1.0454 0.00084151 804.940704728682 808.947331445205 125.77 2.6172 125.77 125.17 127.78 7.6294E-06 501 104 13 0 0 0 0.000132 4 75367 79.82 79.82 1 1.0396 0.92039 0 313960000 156910000 157050000 16242 1548 6143 6286 25340;25341;25342;25343 25340 IEEVPELPLVVEDK 14 1 0 Unmodified _IEEVPELPLVVEDK_ 0 0 0 P36578;Q59GY2;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 809.4496 2 804.940179 1607.8658 67285.46 0.69796 0.00056182 0.14151 0.00011391 0.83948 0.00067573 804.940605621268 808.947275401574 125.57 2.5078 125.57 125.01 127.52 0 537 110 12 0 0 0 0.00016831 4 74348 73.848 73.848 1 1.043 0.90648 0 316940000 154340000 162600000 16243 1548 6143 6286 25344;25345;25346;25347 25344 IEEVPELPLVVEDKVEGYK 19 2 0 Unmodified _IEEVPELPLVVEDKVEGYK_ 0 0 1 P36578;Q59GY2;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.3954 3 729.059465 2184.15657 70683.12 0.92551 0.00067475 0.080684 5.8823E-05 1.0062 0.00073358 729.394630218146 734.402051381456 123.03 0.65415 123.03 122.8 123.46 0 157 30 8 0 0 0 0.0053511 1 72577 24.407 24.407 1 1.0821 0.91904 0 26402000 12924000 13478000 16244 1548 6144 6287 25348 25348 IEEVPELPLVVEDKVEGYKK 20 3 0 Unmodified _IEEVPELPLVVEDKVEGYKK_ 0 0 2 P36578;Q59GY2;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.3316 4 579.070159 2312.25153 78147.18 0.93828 0.00054333 -0.68404 -0.00039611 0.25424 0.00014722 579.32065073026 585.080290238724 114.25 0.47246 114.25 114 114.48 0 112 19 8 0 0 0 0.037125 1 66635 18.353 18.353 1 1.3169 1.2334 0 5827100 2842400 2984700 16245 1548 6145 6288 25349 25349 IEEVPELPLVVEDKVEGYKK 20 3 0 Unmodified _IEEVPELPLVVEDKVEGYKK_ 0 0 2 P36578;Q59GY2;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.3317 4 579.070159 2312.25153 79669.81 0.57473 0.00033281 -0.138 -7.9913E-05 0.43672 0.00025289 579.320950278963 585.331327778027 113.96 0.50743 113.96 113.79 114.3 0 110 21 8 0 0 0 0.043419 1 65596 12.128 12.128 1 1.078 1.0662 0 5457300 2660000 2797400 16246 1548 6145 6288 25350 25350 IEEVPELTLPIIK 13 1 0 Unmodified _IEEVPELTLPIIK_ 0 0 0 B7ZL72;E9PLV1;Q9NQV6;E9PRS0 B7ZL72 B7ZL72 PRDM10 PR domain zinc finger protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.4462 2 747.4449 1492.87525 71006.3 1.1409 0.00085279 -0.18854 -0.00014093 0.9524 0.00071187 747.444864663635 751.451617231592 123.12 0.31671 123.12 122.97 123.29 7.6294E-06 82 26 4 0 0 0 0.0071789 2 79816 45.359 45.359 1 0.69566 0.69948 0 5240300 3001200 2239100 16247 1113 6146 6289 25351;25352 25351 IEEVPELTLPIIK 13 1 0 Unmodified _IEEVPELTLPIIK_ 0 0 0 B7ZL72;E9PLV1;Q9NQV6;E9PRS0 B7ZL72 B7ZL72 PRDM10 PR domain zinc finger protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.4457 2 747.4449 1492.87525 72445.77 0.89433 0.00066846 -0.085673 -6.4036E-05 0.80866 0.00060443 747.444565201676 751.451501837699 122.65 0.39311 122.65 122.42 122.82 0 101 32 5 0 0 0 0.0013051 1 81362 58.37 58.37 1 0.69914 0.70442 0 7348800 3500400 3848400 16248 1113 6146 6289 25353 25353 IEFEPASK 8 1 0 Unmodified _IEFEPASK_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7ELR5;Q8IXW9;K7EQS0;K7EPT1;K7ERC1;K7ELT3;K7EJI3 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 464.7468 2 460.739825 919.465098 91108.76 -0.21182 -9.7592E-05 0.38813 0.00017883 0.17632 8.1236E-05 460.739962976785 464.747017635461 47.159 0.43842 47.159 46.993 47.432 0 134 34 6 0 0 0 0.0395 1 22252 47.574 23.372 1 1.5257 1.1965 0 3799100 1750100 2048900 16249 260 6147 6290 25354 25354 IEFGGNIK 8 1 0 Unmodified _IEFGGNIK_ 0 0 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 439.2424 2 439.242535 876.470518 NaN NaN NaN 0.52494 0.00023057 NaN NaN NaN NaN 51.629 0.68087 51.629 51.279 51.96 0 0 0 0 0.045297 1 28469 51.787 11.684 1 NaN NaN 0 25147000 25147000 0 16250 1991 6148 6291 25355 25355 IEFGGNIK 8 1 0 Unmodified _IEFGGNIK_ 0 0 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 439.2426 2 439.242535 876.470518 91671.63 0.18641 8.188E-05 0.15182 6.6684E-05 0.33823 0.00014856 439.24259230889 443.249402077635 50.393 0.53843 50.393 50.015 50.554 0 152 49 4 0 0 0 0.032434 1 28334 50.632 19.342 1 0.46672 0.50245 0 37789000 25262000 12527000 16251 1991 6148 6291 25356 25356 IEFLQSHENQEIYQK 15 1 0 Unmodified _IEFLQSHENQEIYQK_ 0 0 0 B4DII5;B4DWX3;O60684;O15131;Q5BKZ2;P52294;B3KXZ2;B3KWR2 B4DII5;Q5BKZ2 B4DII5 KPNA6;KPNA5;KPNA1 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-6;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.3186 3 635.98289 1904.92684 78547.37 0.85082 0.00054111 -0.049727 -3.1625E-05 0.8011 0.00050948 636.317445956238 638.654040492302 65.654 0.69435 65.654 65.38 66.074 0 296 63 6 0 0 0 9.2842E-08 2 37763 106.52 106.52 1 1.3511 1.4536 0 38557000 14898000 23659000 16252 980;1600 6149 6292 25357;25358 25358 IEFLQSHENQEIYQK 15 1 0 Unmodified _IEFLQSHENQEIYQK_ 0 0 0 B4DII5;B4DWX3;O60684;O15131;Q5BKZ2;P52294;B3KXZ2;B3KWR2 B4DII5;Q5BKZ2 B4DII5 KPNA6;KPNA5;KPNA1 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-6;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.9836 3 635.98289 1904.92684 76760.32 0.51903 0.0003301 0.15878 0.00010098 0.67781 0.00043108 636.317493399718 638.988685193932 64.008 0.78883 64.008 63.731 64.52 0 392 73 8 0 0 0 6.9347E-05 1 37586 71.98 71.98 1 1.323 1.45 0 40936000 20509000 20426000 16253 980;1600 6149 6292 25359 25359 IEFLQSHENQEIYQK 15 1 0 Unmodified _IEFLQSHENQEIYQK_ 0 0 0 B4DII5;B4DWX3;O60684;O15131;Q5BKZ2;P52294;B3KXZ2;B3KWR2 B4DII5;Q5BKZ2 B4DII5 KPNA6;KPNA5;KPNA1 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-6;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.9836 3 635.98289 1904.92684 76721.64 0.5644 0.00035895 0.59716 0.00037978 1.1616 0.00073873 635.982995896416 638.654362259259 75.237 0.84476 75.237 74.963 75.808 0 211 61 6 0 0 0 0.04529 1 39966 17.425 17.425 1 0.99165 0.78268 0 5982800 2816800 3166000 16254 980;1600 6149 6292 25360 25360 IEFSLPDLEGR 11 0 1 Unmodified _IEFSLPDLEGR_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.3367 2 638.33261 1274.65067 NaN NaN NaN 0.032068 2.047E-05 NaN NaN NaN NaN 112.62 0.51344 112.62 112.4 112.92 0 0 0 0 2.379E-05 1 71105 102.61 52.795 1 NaN NaN 0 6907000 0 6907000 16255 620 6150 6293 25361 25361 IEFVVVGPEAPLAAGIVGNLR 21 0 1 Unmodified _IEFVVVGPEAPLAAGIVGNLR_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1066.113 2 1061.10696 2120.19938 59074.05 0.56585 0.00060042 0.66973 0.00071066 1.2356 0.0013111 1061.60934610071 1066.61303088749 133.45 0.14825 133.45 133.35 133.5 0 14 3 5 0 0 0 1.3804E-06 1 87458 50.088 50.088 1 2.2543 2.4957 0 61875000 19297000 42578000 16256 1507 6151 6294 25362 25362 IEFVVVGPEAPLAAGIVGNLR 21 0 1 Unmodified _IEFVVVGPEAPLAAGIVGNLR_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1066.6121 2 1061.10696 2120.19938 60957.36 0.12983 0.00013776 0.6939 0.0007363 0.82373 0.00087406 1061.10902022449 1066.61223495123 133.39 0.18063 133.39 133.3 133.48 0 22 4 8 0 0 0 2.8762E-11 1 89623 95.651 88.611 1 2.5536 2.9512 0 56148000 16622000 39526000 16257 1507 6151 6294 25363 25363 IEGDETSTEAATR 13 0 1 Unmodified _IEGDETSTEAATR_ 0 0 0 C9JLU1;P52434 C9JLU1 C9JLU1 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.3229 2 690.317885 1378.62122 71997.52 0.39496 0.00027265 -0.92369 -0.00063764 -0.52873 -0.00036499 690.316161683317 695.823274438241 20.491 0.33718 20.491 20.345 20.682 0 55 15 5 0 0 0 0.0004054 1 6894 91.961 15.733 1 0.99489 1.0268 0 20006000 11929000 8077400 16258 1138 6152 6295 25364 25364 IEGDMIVCAAYAHELPK 17 1 0 Oxidation (M) _IEGDM(ox)IVCAAYAHELPK_ IEGDM(1)IVCAAYAHELPK IEGDM(95.41)IVCAAYAHELPK 0 1 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.9783 3 644.977983 1931.91212 74526.59 0.99295 0.00064043 -0.14931 -9.63E-05 0.84364 0.00054413 645.312441445384 647.64950653969 82.849 0.72795 82.849 82.508 83.236 0 449 61 10 0 0 0 1.3046E-07 2 49442 95.409 95.409 1 1.4579 1.6551 0 161220000 64161000 97062000 16259 653 6153 6296 25365;25366 25365 507 IEGDMIVCAAYAHELPK 17 1 0 Oxidation (M) _IEGDM(ox)IVCAAYAHELPK_ IEGDM(1)IVCAAYAHELPK IEGDM(127.61)IVCAAYAHELPK 0 1 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3124 3 644.977983 1931.91212 74907.29 0.58692 0.00037855 -0.62053 -0.00040023 -0.033601 -2.1672E-05 645.312153370938 647.983779644348 83.562 0.82227 83.562 83.206 84.028 0 480 69 9 0 0 0 1.7876E-18 2 49972 127.61 127.61 1 1.278 1.4208 0 60325000 27752000 32572000 16260 653 6153 6296 25367;25368 25367 507 IEGDMIVCAAYAHELPK 17 1 0 Oxidation (M) _IEGDM(ox)IVCAAYAHELPK_ IEGDM(1)IVCAAYAHELPK IEGDM(59.73)IVCAAYAHELPK 0 1 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.6503 3 644.977983 1931.91212 74005.54 0.92512 0.00059668 -0.21267 -0.00013717 0.71245 0.00045951 645.312530307897 647.649429522961 81.856 0.81155 81.856 81.413 82.225 0 516 68 10 0 0 0 2.6084E-05 1 49945 59.728 59.728 1 1.4456 1.6614 0 172820000 68963000 103860000 16261 653 6153 6296 25369 25369 507 IEGDMIVCAAYAHELPK 17 1 0 Oxidation (M) _IEGDM(ox)IVCAAYAHELPK_ IEGDM(1)IVCAAYAHELPK IEGDM(107.75)IVCAAYAHELPK 0 1 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.9844 3 644.977983 1931.91212 75290.47 0.74429 0.00048005 -0.74008 -0.00047734 0.0042082 2.7142E-06 644.977738094366 647.649100546365 82.55 0.70671 82.55 82.201 82.908 7.6294E-06 422 60 10 0 0 0 7.093E-10 3 50476 107.75 107.75 1 1.3187 1.4738 0 97507000 41649000 55858000 16262 653 6153 6296 25370;25371;25372 25371 507 IEGDMIVCAAYAHELPK 17 1 0 Oxidation (M) _IEGDM(ox)IVCAAYAHELPK_ IEGDM(1)IVCAAYAHELPK IEGDM(98.06)IVCAAYAHELPK 0 1 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.9777 3 644.977983 1931.91212 75279.62 0.76831 0.00049555 -0.93848 -0.0006053 -0.17016 -0.00010975 645.311944276142 647.648776803866 95.103 0.63849 95.103 94.833 95.472 0 295 45 10 0 0 0 5.703E-08 1 53201 98.062 98.062 1 0.57881 0.44893 0 13985000 8863300 5121900 16263 653 6153 6296 25373 25373 507 IEGDMIVCAAYAHELPK 17 1 0 Oxidation (M) _IEGDM(ox)IVCAAYAHELPK_ IEGDM(1)IVCAAYAHELPK IEGDM(94.01)IVCAAYAHELPK 0 1 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.3123 3 644.977983 1931.91212 74499.31 0.86309 0.00055668 -0.46216 -0.00029808 0.40094 0.00025859 645.312038648693 647.649374772208 96.071 0.83362 96.071 95.688 96.521 0 337 53 10 0 0 0 1.6916E-07 1 53823 94.01 94.01 1 0.768 0.60021 0 11878000 7301700 4575900 16264 653 6153 6296 25374 25374 507 IEGDMIVCAAYAHELPK 17 1 0 Oxidation (M) _IEGDM(ox)IVCAAYAHELPK_ IEGDM(1)IVCAAYAHELPK IEGDM(65.11)IVCAAYAHELPK 0 1 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.9773 3 644.977983 1931.91212 75399.38 0.60195 0.00038824 -0.75098 -0.00048437 -0.14903 -9.6124E-05 645.312071656181 647.983742869867 95.01 0.6327 95.01 94.733 95.365 0 278 42 9 0 0 0 1.923E-05 1 52362 65.107 65.107 1 0.55437 0.45691 0 10799000 6930000 3868600 16265 653 6153 6296 25375 25375 507 IEGDMIVCAAYAHELPK 17 1 0 Oxidation (M) _IEGDM(ox)IVCAAYAHELPK_ IEGDM(1)IVCAAYAHELPK IEGDM(46.34)IVCAAYAHELPK 0 1 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.984 3 644.977983 1931.91212 74392.04 0.47596 0.00030698 -0.040681 -2.6238E-05 0.43527 0.00028074 644.978214110461 647.983889722027 95.931 0.65469 95.931 95.647 96.302 0 279 42 9 0 0 0 0.0001665 1 52926 46.337 46.337 1 0.74425 0.61486 0 11602000 6355400 5246800 16266 653 6153 6296 25376 25376 507 IEGDMIVCAAYAHELPK 17 1 0 Unmodified _IEGDMIVCAAYAHELPK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.6523 3 639.646345 1915.9172 74079.46 0.63925 0.00040889 0.089608 5.7318E-05 0.72886 0.00046621 639.646440032436 642.652315193965 105.89 0.52744 105.89 105.66 106.19 0 173 26 10 0 0 0 0.00059801 2 60379 37.292 34.87 1 1.0213 0.8159 0 9109500 4293200 4816300 16267 653 6153 6297 25377;25378 25377 IEGDMIVCAAYAHELPK 17 1 0 Unmodified _IEGDMIVCAAYAHELPK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.6521 3 639.646345 1915.9172 74483.77 0.64242 0.00041092 -0.0322 -2.0597E-05 0.61022 0.00039033 639.646221423782 642.652120833052 105.64 0.655 105.64 105.41 106.07 0 233 43 9 0 0 0 0.0006818 2 59319 36.775 34.262 1 1.0434 0.85808 0 10030000 5161200 4868400 16268 653 6153 6297 25379;25380 25379 IEGDPQGVQQAK 12 1 0 Unmodified _IEGDPQGVQQAK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.3323 2 635.325316 1268.63608 75314.16 0.15606 9.9149E-05 -0.19208 -0.00012203 -0.036018 -2.2883E-05 635.82489789569 639.332556008477 22.049 0.3503 22.049 21.845 22.196 0 46 15 5 0 0 0 1.0524E-08 2 8094 122.96 92.795 1 1.5762 1.6301 0 11389000 4646600 6742200 16269 154 6154 6298 25381;25382 25382 IEGNLIFDPNNYLPK 15 1 0 Unmodified _IEGNLIFDPNNYLPK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840;Q7Z7Q0;A8MUN2;E1A689;C0JYY2;P04114;A8K479 CON__ENSEMBL:ENSBTAP00000032840;E1A689 CON__ENSEMBL:ENSBTAP00000032840 APOB Apolipoprotein B-100;Apolipoprotein B-48 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.9572 2 873.956694 1745.89884 NaN NaN NaN 0.54813 0.00047904 NaN NaN NaN NaN 120.56 0.41394 120.56 120.33 120.74 0 0 0 0 0.00029571 2 77715 75.695 54.138 1 NaN NaN 0 4708400 4708400 0 + 16270 1146;1123 6155 6299 25383;25384 25384 IEGVYAR 7 0 1 Unmodified _IEGVYAR_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 409.2254 2 404.221603 806.428653 NaN NaN NaN -0.092816 -3.7518E-05 NaN NaN NaN NaN 27.828 0.71264 27.828 27.579 28.291 0 0 0 0 0.031834 1 12879 73.039 24.797 1 NaN NaN 0 264430000 0 264430000 16271 1497 6156 6300 25385 25385 IEGVYAR 7 0 1 Unmodified _IEGVYAR_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 409.2257 2 404.221603 806.428653 92920.71 -0.17609 -7.1181E-05 0.093356 3.7737E-05 -0.082738 -3.3444E-05 404.221568664534 409.225674237772 27.369 0.88784 27.369 27.034 27.922 0 172 46 8 0 0 0 0.026711 1 12590 76.847 28.605 1 0.86003 1.0053 0 594050000 318570000 275470000 16272 1497 6156 6300 25386 25386 IEGVYAR 7 0 1 Unmodified _IEGVYAR_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 404.2214 2 404.221603 806.428653 91703.42 -0.1219 -4.9274E-05 0.43173 0.00017451 0.30983 0.00012524 404.221596662977 409.225746261087 31.198 0.88618 31.198 30.862 31.748 -1.9073E-06 283 52 8 0 0 0 0.033078 1 13063 64.523 16.281 1 0.83907 0.7132 0 34259000 18252000 16006000 16273 1497 6156 6300 25387 25387 IEGVYAR 7 0 1 Unmodified _IEGVYAR_ 0 0 0 P18077;F8WBS5;F8WB72;C9K025 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 404.2215 2 404.221603 806.428653 93587.91 -0.20719 -8.3749E-05 0.28891 0.00011678 0.081724 3.3035E-05 404.221587737978 409.225740682322 31.187 1.0143 31.187 30.912 31.926 1.9073E-06 243 54 8 0 0 0 0.034046 2 12650 62.978 14.312 1 0.88049 0.76805 0 29263000 16192000 13071000 16274 1497 6156 6300 25388;25389 25388 IEGYEDQVLITEHGDLGNSR 20 0 1 Unmodified _IEGYEDQVLITEHGDLGNSR_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.0294 3 749.029228 2244.06585 70038.01 0.58181 0.00043579 0.10636 7.9666E-05 0.68817 0.00051546 749.02886767587 752.365307745802 79.133 0.49512 79.133 78.943 79.438 0 151 45 5 0 0 0 2.8139E-09 2 46828 88.264 88.264 1 1.2381 1.2665 0 34995000 8267900 26727000 16275 43 6157 6301 25390;25391 25390 IEGYEDQVLITEHGDLGNSR 20 0 1 Unmodified _IEGYEDQVLITEHGDLGNSR_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.6974 3 749.029228 2244.06585 NaN NaN NaN -0.006216 -4.656E-06 NaN NaN NaN NaN 79.074 0.18418 79.074 78.943 79.127 0 0 0 0 0.0027951 1 46818 34.649 24.55 1 NaN NaN 0 13523000 13523000 0 16276 43 6157 6301 25392 25392 IEGYEDQVLITEHGDLGNSR 20 0 1 Unmodified _IEGYEDQVLITEHGDLGNSR_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.3605 3 749.029228 2244.06585 71690.13 0.45282 0.00033917 0.046209 3.4612E-05 0.49902 0.00037378 749.028512402597 752.365472552999 78.035 0.59978 78.035 77.739 78.339 -7.6294E-06 261 49 8 0 0 0 3.0928E-13 2 47257 103.1 103.1 1 1.4316 1.5657 0 34697000 12227000 22470000 16277 43 6157 6301 25393;25394 25394 IEGYEDQVLITEHGDLGNSR 20 0 1 Unmodified _IEGYEDQVLITEHGDLGNSR_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 749.3614 3 749.029228 2244.06585 69614.02 0.88765 0.00066488 -0.21383 -0.00016017 0.67382 0.00050471 749.363373436635 752.364960380836 90.759 0.5042 90.759 90.51 91.014 0 178 28 10 0 0 0 2.4315E-06 2 50311 49.865 49.865 1 2.2943 1.9715 0 6437100 1861100 4576000 16278 43 6157 6301 25395;25396 25396 IEGYEDQVLITEHGDLGNSR 20 0 1 Unmodified _IEGYEDQVLITEHGDLGNSR_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 752.3646 3 749.029228 2244.06585 69780.84 0.39215 0.00029373 0.069885 5.2346E-05 0.46203 0.00034607 749.363050978992 752.700617354755 90.625 0.71371 90.625 90.416 91.13 -7.6294E-06 154 39 9 0 0 0 5.5328E-07 2 49364 71.742 71.742 1 2.2392 1.8578 0 5579400 1654600 3924800 16279 43 6157 6301 25397;25398 25397 IEHLIGK 7 1 0 Unmodified _IEHLIGK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 409.2547 2 405.247621 808.480688 93722.3 0.18033 7.3079E-05 0.050209 2.0347E-05 0.23054 9.3426E-05 405.247582865755 409.254579769605 25.319 0.39912 25.319 25.161 25.56 1.9073E-06 83 20 8 0 0 0 0.011777 2 10964 107.43 37.322 1 1.0671 1.2053 0 139800000 65614000 74184000 16280 313 6158 6302 25399;25400 25399 IEHLIGK 7 1 0 Unmodified _IEHLIGK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 405.2478 2 405.247621 808.480688 92636.59 0.24501 9.9289E-05 0.33658 0.0001364 0.58159 0.00023569 405.247589326466 409.254749060418 24.803 0.45117 24.803 24.655 25.106 0 81 19 7 0 0 0 0.012723 2 10466 104.8 43.549 1 1.2003 1.356 0 129910000 59366000 70549000 16281 313 6158 6302 25401;25402 25402 IEHSFWR 7 0 1 Unmodified _IEHSFWR_ 0 0 0 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 325.4995 3 325.49961 973.477 109979.9 -0.088177 -2.8702E-05 -0.16324 -5.3136E-05 -0.25142 -8.1837E-05 325.499485013916 328.835728069012 38.13 0.30792 38.13 37.971 38.279 0 67 23 4 0 0 0 0.028878 1 19953 37.021 17.544 1 0.4981 0.49337 0 15573000 11683000 3890200 16282 1770 6159 6303 25403 25403 IEIDPQFQVVR 11 0 1 Unmodified _IEIDPQFQVVR_ 0 0 0 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 CON__Q8N1N4-2 KRT78 Keratin, type II cytoskeletal 78 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.3704 2 672.369527 1342.7245 NaN NaN NaN -0.66353 -0.00044614 NaN NaN NaN NaN 110.26 0.41287 110.26 110.01 110.42 0 0 0 0 0.006292 1 63613 63.816 34.343 1 NaN NaN 0 1077600 1077600 0 + 16283 1178 6160 6304 25404 25404 IEIESFYEGEDFSETLTR 18 0 1 Unmodified _IEIESFYEGEDFSETLTR_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1083.5007 2 1082.99968 2163.98481 60649.67 0.36263 0.00039273 0.64734 0.00070107 1.01 0.0010938 1083.00045189913 1088.00550784495 115.32 0.51939 115.32 115 115.52 0 70 34 4 0 0 0 0.024871 1 75244 35.737 30.658 1 1.3449 1.3364 0 7418900 4190000 3229000 16284 1466 6161 6305 25405 25405 IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR 31 0 1 Unmodified _IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.6901 4 869.187845 3472.72228 65080.46 0.83981 0.00072995 0.074457 6.4717E-05 0.91426 0.00079467 869.68923052342 871.940475885941 103.15 0.98912 103.15 102.75 103.73 -7.6294E-06 575 82 11 0 0 0 4.8289E-36 2 63626 107.3 107.3 1 1.8534 2.0755 0 89576000 28527000 61049000 16285 1569 6162 6306 25406;25407 25406 IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR 31 0 1 Unmodified _IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.9415 4 869.187845 3472.72228 64761.84 0.4632 0.00040261 0.38342 0.00033327 0.84662 0.00073587 869.689478520972 871.940710018848 101.86 1.2038 101.86 101.21 102.41 0 724 94 12 0 0 0 3.0549E-05 2 64010 36.698 36.698 1 1.6791 1.9164 0 144510000 55021000 89493000 16286 1569 6162 6306 25408;25409 25408 IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR 31 0 1 Unmodified _IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1162.2513 3 1158.58137 3472.72228 55666.32 0.2947 0.00034144 -0.19524 -0.0002262 0.099466 0.00011524 1159.24889271596 1162.58549294056 112.34 0.38016 112.34 112.21 112.59 0 104 20 11 0 0 0 0.00028161 1 65210 27.119 27.119 1 3.1589 2.5905 0 12484000 2865800 9617900 16287 1569 6162 6306 25410 25410 IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR 31 0 1 Unmodified _IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.4395 4 869.187845 3472.72228 64005.02 0.76364 0.00066374 -0.092413 -8.0324E-05 0.67123 0.00058342 869.689264747999 871.940563649098 112.34 0.78117 112.34 112.15 112.93 0 337 40 16 0 0 0 7.1568E-37 2 65222 111.89 111.89 1 3.119 2.7023 0 156790000 38367000 118420000 16288 1569 6162 6306 25411;25412 25412 IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR 31 0 1 Unmodified _IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 871.941 4 869.187845 3472.72228 64067.93 0.37065 0.00032216 0.31114 0.00027044 0.68179 0.0005926 869.689521836418 871.940855394281 112.14 0.83175 112.14 111.92 112.75 0 383 43 15 0 0 0 2.2504E-18 1 64354 70.151 70.151 1 3.2722 2.8562 0 90842000 20416000 70427000 16289 1569 6162 6306 25413 25413 IEIHYAK 7 1 0 Unmodified _IEIHYAK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 441.2528 2 437.245078 872.475603 91425.33 -0.2012 -8.7976E-05 0.27845 0.00012175 0.077241 3.3773E-05 437.245097608129 441.252229500298 30.993 1.0189 30.993 30.765 31.784 0 243 61 8 0 0 0 0.037563 2 12899 60.788 6.2627 1 1.6266 1.3228 0 29651000 11368000 18284000 16290 740 6163 6307 25414;25415 25414 IEIHYAK 7 1 0 Unmodified _IEIHYAK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 441.2528 2 437.245078 872.475603 91220.86 -0.12246 -5.3545E-05 0.25069 0.00010962 0.12824 5.607E-05 437.245108436573 441.252172625282 30.919 1.2601 30.919 30.648 31.908 1.9073E-06 230 67 8 0 0 0 0.037563 2 12376 60.788 12.614 1 1.62 1.3382 0 31577000 11729000 19849000 16291 740 6163 6307 25416;25417 25416 IEINQTGTTLYYQPGLLYGGSVEHDCSVLR 30 0 1 Unmodified _IEINQTGTTLYYQPGLLYGGSVEHDCSVLR_ 0 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1132.23 3 1128.5574 3382.65036 57630.06 0.31429 0.0003547 0.15427 0.0001741 0.46857 0.0005288 1129.22661684446 1132.22899045018 112.81 0.42753 112.81 112.66 113.08 0 152 31 8 0 0 0 0.0002884 2 71285 29.028 29.028 1 0.65367 0.68111 0 13389000 8415400 4973800 16292 2125 6164 6308 25418;25419 25418 IEINQTGTTLYYQPGLLYGGSVEHDCSVLR 30 0 1 Unmodified _IEINQTGTTLYYQPGLLYGGSVEHDCSVLR_ 0 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1129.2261 3 1128.5574 3382.65036 58321.76 0.46673 0.00052673 -0.57715 -0.00065135 -0.11042 -0.00012462 1128.89130641346 1132.22818640465 112.22 0.4309 112.22 112.04 112.47 0 175 32 10 0 0 0 5.2243E-07 1 72567 37.424 37.424 1 0.95646 1.008 0 23293000 11545000 11748000 16293 2125 6164 6308 25420 25420 IEINQTGTTLYYQPGLLYGGSVEHDCSVLR 30 0 1 Unmodified _IEINQTGTTLYYQPGLLYGGSVEHDCSVLR_ 0 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1132.5625 3 1128.5574 3382.65036 56432.48 0.26503 0.0002991 -0.075722 -8.5457E-05 0.18931 0.00021364 1128.89155776416 1132.22782800912 123.56 0.4553 123.56 123.35 123.81 0 139 18 14 0 0 0 2.9863E-23 2 73863 94.192 94.192 1 1.2723 1.0585 0 21894000 9546100 12348000 16294 2125 6164 6308 25421;25422 25422 IEINQTGTTLYYQPGLLYGGSVEHDCSVLR 30 0 1 Unmodified _IEINQTGTTLYYQPGLLYGGSVEHDCSVLR_ 0 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1132.2272 3 1128.5574 3382.65036 56588.42 0.33344 0.00037631 -0.09437 -0.0001065 0.23907 0.00026981 1128.89149195056 1132.22795738666 123.41 0.44862 123.41 123.24 123.69 0 130 18 11 0 0 0 9.2729E-24 3 72843 98.236 98.236 1 1.245 1.0567 0 18874000 8546900 10327000 16295 2125 6164 6308 25423;25424;25425 25423 IEISELNR 8 0 1 Unmodified _IEISELNR_ 0 0 0 CON__P35908;P35908;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P35908;H6VRG3;H6VRG2 H6VRG3 KRT2;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.2694 2 487.269281 972.52401 NaN NaN NaN -0.51823 -0.00025252 NaN NaN NaN NaN 56.181 1.9725 56.181 55.849 57.822 0 0 0 0 0.0083469 2 32213 80.229 7.9597 1 NaN NaN 0 781710000 781710000 0 + 16296 1308;1309;1166 6165 6309 25426;25427 25427 IEISELNR 8 0 1 Unmodified _IEISELNR_ 0 0 0 CON__P35908;P35908;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P35908;H6VRG3;H6VRG2 H6VRG3 KRT2;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.2695 2 487.269281 972.52401 NaN NaN NaN -0.51247 -0.00024971 NaN NaN NaN NaN 55.201 1.967 55.201 54.81 56.777 0 0 0 0 6.1641E-05 3 31951 120.62 26.214 1 NaN NaN 0 1323300000 1323300000 0 + 16297 1308;1309;1166 6165 6309 25428;25429;25430 25429 IEISELNR 8 0 1 Unmodified _IEISELNR_ 0 0 0 CON__P35908;P35908;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P35908;H6VRG3;H6VRG2 H6VRG3 KRT2;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.2693 2 487.269281 972.52401 NaN NaN NaN -0.28228 -0.00013754 NaN NaN NaN NaN 65.169 1.9224 65.169 64.361 66.283 0 0 0 0 0.0029945 3 33850 104.75 22.442 1 NaN NaN 0 102610000 102610000 0 + 16298 1308;1309;1166 6165 6309 25431;25432;25433 25432 IEISELNR 8 0 1 Unmodified _IEISELNR_ 0 0 0 CON__P35908;P35908;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P35908;H6VRG3;H6VRG2 H6VRG3 KRT2;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.2692 2 487.269281 972.52401 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.924 1 67.924 67.424 68.424 7.6294E-06 0 0 0 0.050341 1 34650 54.549 8.8314 1 + 16299 1308;1309;1166 6165 6309 25434 25434 IEISSPCCPR 10 0 1 Unmodified _IEISSPCCPR_ 0 0 0 Q5T749 Q5T749 Q5T749 KPRP Keratinocyte proline-rich protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 609.7841 2 609.783915 1217.55328 NaN NaN NaN -0.62309 -0.00037995 NaN NaN NaN NaN 54.012 0.5543 54.012 53.792 54.347 0 0 0 0 0.045989 1 26894 47.823 26.922 1 NaN NaN 0 2012800 2012800 0 16300 1824 6166 6310 25435 25435 IEISSPCCPR 10 0 1 Unmodified _IEISSPCCPR_ 0 0 0 Q5T749 Q5T749 Q5T749 KPRP Keratinocyte proline-rich protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.7837 2 609.783915 1217.55328 NaN NaN NaN -0.27294 -0.00016644 NaN NaN NaN NaN 54.51 0.53175 54.51 54.271 54.803 0 0 0 0 0.015553 1 26627 57.598 37.812 1 NaN NaN 0 1664500 1664500 0 16301 1824 6166 6310 25436 25436 IELEEMGPSLDLVLR 15 0 1 Oxidation (M) _IELEEM(ox)GPSLDLVLR_ IELEEM(1)GPSLDLVLR IELEEM(117.23)GPSLDLVLR 0 1 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 870.4598 2 865.45567 1728.89679 NaN NaN NaN -0.39024 -0.00033773 NaN NaN NaN NaN 117.04 0.60702 117.04 116.7 117.31 0 0 0 0 8.7145E-12 1 74669 117.23 100.21 1 NaN NaN 0 59357000 0 59357000 16302 773 6167 6311 25437 25437 605 IELEEMGPSLDLVLR 15 0 1 Unmodified _IELEEMGPSLDLVLR_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 862.4335 2 857.458213 1712.90187 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.67 1 134.67 134.17 135.17 0 0 0 0 0.001379 1 81440 62.338 44.071 1 16303 773 6167 6312 25438 25438 IELEPPDK 8 1 0 Unmodified _IELEPPDK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.7599 2 470.752933 939.491313 86873.22 0.17364 8.174E-05 -0.20188 -9.5038E-05 -0.028247 -1.3298E-05 470.752661638291 474.760288765668 50.518 0.50073 50.518 50.384 50.885 0 125 47 5 0 0 0 0.011482 1 27860 69.825 69.825 1 0.65037 0.73301 0 75649000 46362000 29287000 16304 897 6168 6313 25439 25439 IELEPPDK 8 1 0 Unmodified _IELEPPDK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.7527 2 470.752933 939.491313 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.214 1 49.214 48.714 49.714 0 0 0 0 0.021128 1 27665 67.169 22.775 1 16305 897 6168 6313 25440 25440 IELPELFDR 9 0 1 Unmodified _IELPELFDR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.3099 2 566.305864 1130.59717 80878.39 0.92483 0.00052374 -0.3339 -0.00018909 0.59093 0.00033465 566.305706866329 571.309692297345 112.18 0.50535 112.18 111.97 112.47 0 143 34 6 0 0 0 0.004107 2 70709 78.334 35.088 1 2.1306 2.2349 0 11048000 3505700 7542400 16306 1293 6169 6314 25441;25442 25441 IELPELFDR 9 0 1 Unmodified _IELPELFDR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.3065 2 566.305864 1130.59717 81794.01 0.8863 0.00050192 -0.3944 -0.00022335 0.4919 0.00027856 566.305824541437 571.309531375294 111.57 0.53296 111.57 111.35 111.89 -7.6294E-06 135 34 7 0 0 0 0.0096208 1 72081 60.019 36.064 1 1.873 1.8434 0 14466000 5759300 8707000 16307 1293 6169 6314 25443 25443 IELPELFDR 9 0 1 Unmodified _IELPELFDR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.3094 2 566.305864 1130.59717 82921.51 0.84814 0.00048031 -0.25438 -0.00014406 0.59376 0.00033625 566.30579726774 571.309828278258 123.35 0.47704 123.35 123.15 123.63 0 73 19 5 0 0 0 0.039248 1 73707 48.794 14.998 1 0.91874 0.79564 0 2568400 1312800 1255600 16308 1293 6169 6314 25444 25444 IELPELFDR 9 0 1 Unmodified _IELPELFDR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.3099 2 566.305864 1130.59717 82231.09 0.78774 0.0004461 -0.30525 -0.00017287 0.48249 0.00027324 566.305820703716 571.30971540353 123.17 0.51038 123.17 122.92 123.43 0 72 23 5 0 0 0 0.020335 1 72660 47.603 19.429 1 0.77973 0.68193 0 2558700 1317400 1241300 16309 1293 6169 6314 25445 25445 IELWEQEHSK 10 1 0 Unmodified _IELWEQEHSK_ 0 0 0 A0A024RC67;O43663;G3V3N7;H0YL53 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.8298 2 649.822409 1297.63027 77268.92 0.51995 0.00033788 0.30408 0.0001976 0.82403 0.00053547 649.82273177772 653.829459073431 52.501 0.55005 52.501 52.237 52.788 3.8147E-06 209 42 7 0 0 0 0.027593 1 25949 43.77 36.642 1 1.1035 0.87368 0 3027700 1367200 1660500 16310 353 6170 6315 25446 25446 IELWEQEHSK 10 1 0 Unmodified _IELWEQEHSK_ 0 0 0 A0A024RC67;O43663;G3V3N7;H0YL53 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.8317 2 649.822409 1297.63027 78061.16 0.4429 0.00028781 -0.20924 -0.00013597 0.23366 0.00015184 649.822259707729 653.82937423413 52.637 0.77794 52.637 52.403 53.181 0 229 61 7 0 0 0 0.022058 1 25384 45.997 45.997 1 1.2463 0.97584 0 2079500 794270 1285300 16311 353 6170 6315 25447 25447 IENVETLVLQAPK 13 1 0 Unmodified _IENVETLVLQAPK_ 0 0 0 O95235;D6RBN1;D6R9E4 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.4172 2 727.416674 1452.81879 72420.13 0.77488 0.00056366 0.3211 0.00023357 1.096 0.00079723 727.416806926758 731.423886695286 102.96 0.76324 102.96 102.62 103.38 -7.6294E-06 419 65 8 0 0 0 0.00013091 2 63336 84.507 71.416 1 0.77605 0.87839 0 101190000 59280000 41907000 16312 1421 6171 6316 25448;25449 25448 IENVETLVLQAPK 13 1 0 Unmodified _IENVETLVLQAPK_ 0 0 0 O95235;D6RBN1;D6R9E4 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.4242 2 727.416674 1452.81879 71415.92 0.91199 0.0006634 -0.11271 -8.1991E-05 0.79928 0.00058141 727.416404841451 731.423715374448 102.2 0.88868 102.2 101.9 102.79 -7.6294E-06 373 69 8 0 0 0 3.4455E-06 2 64378 108.35 92.719 1 0.78837 0.88876 0 125010000 70215000 54798000 16313 1421 6171 6316 25450;25451 25451 IENVETLVLQAPK 13 1 0 Unmodified _IENVETLVLQAPK_ 0 0 0 O95235;D6RBN1;D6R9E4 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.4171 2 727.416674 1452.81879 71993.45 1.0719 0.00077971 -0.11696 -8.5079E-05 0.95493 0.00069463 727.416640433751 731.423633335104 115.36 1.0191 115.36 115.1 116.12 0 272 45 10 0 0 0 1.5567E-19 2 67505 149.23 122.72 1 1.2627 1.0526 0 48416000 21689000 26727000 16314 1421 6171 6316 25452;25453 25453 IENVETLVLQAPK 13 1 0 Unmodified _IENVETLVLQAPK_ 0 0 0 O95235;D6RBN1;D6R9E4 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.9188 2 727.416674 1452.81879 71976.23 0.75053 0.00054595 0.096356 7.0091E-05 0.84688 0.00061604 727.416784777874 731.423774834842 115.23 1.0531 115.23 114.89 115.94 0 276 50 9 0 0 0 0.00013042 2 66424 90.05 69.747 1 1.3515 1.1416 0 56898000 24193000 32705000 16315 1421 6171 6316 25454;25455 25455 IEPAEELNSNDMK 13 1 0 Oxidation (M) _IEPAEELNSNDM(ox)K_ IEPAEELNSNDM(1)K IEPAEELNSNDM(94.62)K 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.8538 2 753.343046 1504.67154 72755.56 0.88951 0.00067011 0.24516 0.00018469 1.1347 0.0008548 753.343523323341 757.350005022489 38.278 0.36033 38.278 38.096 38.456 0 82 29 4 0 0 0 3.657E-05 1 19593 94.616 88.376 1 1.6557 1.6924 0 10496000 5424300 5071400 16316 1569 6172 6317 25456 25456 1335 IEPAEELNSNDMK 13 1 0 Oxidation (M) _IEPAEELNSNDM(ox)K_ IEPAEELNSNDM(1)K IEPAEELNSNDM(77.06)K 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.3508 2 753.343046 1504.67154 71633.69 0.46468 0.00035007 0.14648 0.00011035 0.61116 0.00046041 753.343270122947 757.350072151043 37.372 0.41918 37.372 37.196 37.615 0 122 34 5 0 0 0 5.8396E-05 2 19339 77.062 70.822 1 1.8135 1.8478 0 17030000 6750000 10280000 16317 1569 6172 6317 25457;25458 25457 1335 IEPGVSVSLVNPQPSNGHFSTK 22 1 0 Unmodified _IEPGVSVSLVNPQPSNGHFSTK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;B3KXA9 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.3956 3 765.397363 2293.17026 NaN NaN NaN 1.0157 0.00077741 NaN NaN NaN NaN 82.864 0.38295 82.864 82.717 83.1 0 0 0 0 0.0094997 1 49565 29.126 19.872 1 NaN NaN 0 8649900 8649900 0 16318 883 6173 6318 25459 25459 IEPGVSVSLVNPQPSNGHFSTK 22 1 0 Unmodified _IEPGVSVSLVNPQPSNGHFSTK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;B3KXA9 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.3979 3 765.397363 2293.17026 NaN NaN NaN 0.050878 3.8942E-05 NaN NaN NaN NaN 81.852 0.35007 81.852 81.653 82.003 0 0 0 0 0.051019 1 50017 21.865 16.155 1 NaN NaN 0 10319000 10319000 0 16319 883 6173 6318 25460 25460 IEPHTGLLLLSVQK 14 1 0 Unmodified _IEPHTGLLLLSVQK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.3146 3 516.643369 1546.90828 87825.63 0.62946 0.0003252 -0.869 -0.00044896 -0.23954 -0.00012376 516.643029882003 519.3143437409 92.267 0.54287 92.267 91.979 92.522 0 119 46 5 0 0 0 0.00079175 1 57073 48.608 42.027 1 0.86568 0.87461 0 16356000 6314000 10042000 16320 1486 6174 6319 25461 25461 IEPPGLFR 8 0 1 Unmodified _IEPPGLFR_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.7659 2 464.766178 927.517802 86915.3 0.50182 0.00023323 -0.42505 -0.00019755 0.076765 3.5678E-05 464.766015957581 469.769983408522 80.459 1.3575 80.459 79.989 81.346 0 678 116 9 0 0 0 0.0062085 3 47667 88.029 43.418 1 1.064 1.2622 0 653620000 322660000 330960000 16321 1470 6175 6320 25462;25463;25464 25463 IEPPGLFR 8 0 1 Unmodified _IEPPGLFR_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.7704 2 464.766178 927.517802 87647.44 0.36963 0.00017179 -0.19134 -8.8929E-05 0.17829 8.2865E-05 464.766075884299 469.770120744401 79.243 1.6652 79.243 78.719 80.384 -7.6294E-06 730 137 10 0 0 0 0.019334 2 47900 59.205 30.693 1 1.0757 1.2582 0 625850000 300080000 325770000 16322 1470 6175 6320 25465;25466 25465 IEPPGLFR 8 0 1 Unmodified _IEPPGLFR_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.766 2 464.766178 927.517802 NaN NaN NaN -0.81871 -0.00038051 NaN NaN NaN NaN 80.644 0.34621 80.644 80.384 80.73 0 0 0 0 0.051482 1 49010 49.358 8.1314 1 NaN NaN 0 4917400 4917400 0 16323 1470 6175 6320 25467 25467 IEPPGLFR 8 0 1 Unmodified _IEPPGLFR_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.7661 2 464.766178 927.517802 87879.21 0.43127 0.00020044 -0.32907 -0.00015294 0.10221 4.7502E-05 464.76600647403 469.770058476182 91.439 2.2218 91.439 90.929 93.151 0 765 138 9 0 0 0 0.042803 1 51093 46.37 17.032 1 1.4355 1.242 0 124360000 50817000 73547000 16324 1470 6175 6320 25468 25468 IEPPGLFR 8 0 1 Unmodified _IEPPGLFR_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 469.7707 2 464.766178 927.517802 88219.44 0.20012 9.3008E-05 -0.26837 -0.00012473 -0.068247 -3.1719E-05 464.766106565919 469.770045883606 91.287 2.3533 91.287 90.72 93.074 0 722 142 9 0 0 0 0.021849 1 50111 57.559 29.047 1 1.451 1.2668 0 115910000 47651000 68261000 16325 1470 6175 6320 25469 25469 IEQIQCYSAK 10 1 0 Unmodified _IEQIQCYSAK_ 0 0 0 P52948;H7C3P6;H0YCT1 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.3047 2 620.305538 1238.59652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.436 1 36.436 35.936 36.936 0 0 0 0 0.0061766 1 18727 62.558 22.206 1 16326 1603 6176 6321 25470 25470 IEQIQCYSAK 10 1 0 Unmodified _IEQIQCYSAK_ 0 0 0 P52948;H7C3P6;H0YCT1 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.8139 2 620.305538 1238.59652 78545.13 0.47603 0.00029528 0.46733 0.00028988 0.94336 0.00058517 620.305843767226 624.312819610384 42.866 0.37073 42.866 42.704 43.075 0 85 24 6 0 0 0 0.0033685 2 20085 64.841 30.033 1 1.1434 0.95889 0 1240400 625460 614950 16327 1603 6176 6321 25471;25472 25471 IEQIQCYSAK 10 1 0 Unmodified _IEQIQCYSAK_ 0 0 0 P52948;H7C3P6;H0YCT1 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.306 2 620.305538 1238.59652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.091 1 43.091 42.591 43.591 0 0 0 0 0.014006 1 19704 56.013 32.49 1 16328 1603 6176 6321 25473 25473 IEQVDKEDEITEK 13 2 0 Unmodified _IEQVDKEDEITEK_ 0 0 1 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.4045 2 788.39105 1574.76755 68408.04 1.0116 0.0007975 0.50271 0.00039633 1.5143 0.0011938 788.392503517576 796.405120306224 28.626 0.55409 28.626 28.469 29.023 0 202 30 9 0 0 0 6.2091E-23 2 13492 156.81 129.33 1 0.81902 0.96638 0 161280000 85948000 75337000 16329 2129 6177 6322 25474;25475 25474 IEQVDKEDEITEK 13 2 0 Unmodified _IEQVDKEDEITEK_ 0 0 1 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.9303 3 525.929792 1574.76755 82672.71 0.72241 0.00037994 -0.35995 -0.00018931 0.36245 0.00019062 525.929577571473 531.272445944641 28.64 0.69595 28.64 28.39 29.086 0 256 39 9 0 0 0 2.7972E-07 2 13502 92.265 92.265 1 0.79232 0.93472 0 230820000 128480000 102340000 16330 2129 6177 6322 25476;25477 25476 IEQVDKEDEITEK 13 2 0 Unmodified _IEQVDKEDEITEK_ 0 0 1 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.407 2 788.39105 1574.76755 68740.13 0.63086 0.00049737 0.31198 0.00024596 0.94284 0.00074333 788.39187832044 796.405195462421 27.942 0.62127 27.942 27.706 28.328 0 204 32 9 0 0 0 7.0799E-38 2 13061 180.09 153.97 1 0.76049 0.88589 0 231190000 128210000 102980000 16331 2129 6177 6322 25478;25479 25479 IEQVDKEDEITEK 13 2 0 Unmodified _IEQVDKEDEITEK_ 0 0 1 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.9297 3 525.929792 1574.76755 83071.03 0.31652 0.00016647 -0.15698 -8.2562E-05 0.15954 8.3905E-05 525.929741564809 531.272457830663 27.942 0.75788 27.942 27.649 28.407 -1.9073E-06 260 41 10 0 0 0 1.7532E-05 1 13144 89.231 89.231 1 0.75289 0.87828 0 329940000 189600000 140340000 16332 2129 6177 6322 25480 25480 IEQVDKEDEITEK 13 2 0 Unmodified _IEQVDKEDEITEK_ 0 0 1 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.8923 2 788.39105 1574.76755 68788.52 0.56144 0.00044264 0.056346 4.4423E-05 0.61779 0.00048706 788.390923518241 796.405304284236 33.733 0.84977 33.733 33.292 34.141 0 327 72 7 0 0 0 0.014814 1 14130 52.495 52.495 1 0.97699 0.82569 0 11390000 5087600 6302400 16333 2129 6177 6322 25481 25481 IEQVDKEDEITEK 13 2 0 Unmodified _IEQVDKEDEITEK_ 0 0 1 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.271 3 525.929792 1574.76755 83399.59 0.30671 0.00016131 0.44126 0.00023207 0.74797 0.00039338 525.930268072988 531.272123010281 33.72 0.74647 33.72 33.292 34.038 0 298 62 7 0 0 0 0.047115 1 14169 33.204 33.204 1 1.0439 0.88377 0 15283000 7485600 7797600 16334 2129 6177 6322 25482 25482 IESEGLLSLTTQLVK 15 1 0 Unmodified _IESEGLLSLTTQLVK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.9683 2 815.966728 1629.9189 NaN NaN NaN 0.1596 0.00013023 NaN NaN NaN NaN 122.46 0.38135 122.46 122.34 122.73 7.6294E-06 0 0 0 0.0011654 1 81181 66.498 41.281 1 NaN NaN 0 6366300 6366300 0 16335 305 6178 6323 25483 25483 IESIQLMMDSETGR 14 0 1 2 Oxidation (M) _IESIQLM(ox)M(ox)DSETGR_ IESIQLM(1)M(1)DSETGR IESIQLM(64.64)M(64.64)DSETGR 0 2 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;A0A0U1RQW2 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.3823 2 821.376562 1640.73857 NaN NaN NaN 0.31402 0.00025793 NaN NaN NaN NaN 57.517 0.72375 57.517 56.983 57.707 -3.8147E-06 0 0 0 0.00051729 1 32205 64.64 54.408 1 NaN NaN 0 3123000 0 3123000 16336 588 6179 6324 25484 25484 442;443 IESIQLMMDSETGR 14 0 1 2 Oxidation (M) _IESIQLM(ox)M(ox)DSETGR_ IESIQLM(1)M(1)DSETGR IESIQLM(52.69)M(52.69)DSETGR 0 2 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;A0A0U1RQW2 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.3801 2 821.376562 1640.73857 NaN NaN NaN -0.014549 -1.195E-05 NaN NaN NaN NaN 56.687 0.60114 56.687 56.252 56.853 3.8147E-06 0 0 0 0.0017221 1 32388 52.693 40.827 1 NaN NaN 0 5061300 0 5061300 16337 588 6179 6324 25485 25485 442;443 IESLSSQLSNLQK 13 1 0 Unmodified _IESLSSQLSNLQK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8936 2 723.893563 1445.77257 72307.87 0.68881 0.00049862 -0.10782 -7.8053E-05 0.58098 0.00042057 723.893374721196 727.900587108725 79.074 0.73307 79.074 78.884 79.617 0 377 66 8 0 0 0 6.1996E-89 3 46826 231.42 231.42 1 1.1043 1.2791 0 235720000 106000000 129720000 16338 1502 6180 6325 25486;25487;25488 25486 IESLSSQLSNLQK 13 1 0 Unmodified _IESLSSQLSNLQK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.9004 2 723.893563 1445.77257 72563.02 0.43101 0.00031201 -0.18292 -0.00013241 0.2481 0.0001796 723.893304215528 727.900500614891 78.057 0.71017 78.057 77.838 78.548 7.6294E-06 330 61 8 0 0 0 1.1376E-18 3 47310 140.78 140.78 1 1.0621 1.2101 0 149950000 70383000 79568000 16339 1502 6180 6325 25489;25490;25491 25490 IESLSSQLSNLQK 13 1 0 Unmodified _IESLSSQLSNLQK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.8959 2 723.893563 1445.77257 70556.58 0.94036 0.00068072 1.1279 0.0008165 2.0683 0.0014972 723.893991523473 727.901840199845 91.115 0.57859 91.115 90.812 91.39 7.6294E-06 186 35 8 0 0 0 9.961E-05 2 50520 92.611 92.611 1 0.90963 0.70528 0 13794000 6982700 6811000 16340 1502 6180 6325 25492;25493 25493 IESLSSQLSNLQK 13 1 0 Unmodified _IESLSSQLSNLQK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.8946 2 723.893563 1445.77257 70387.31 0.59932 0.00043384 1.0808 0.00078239 1.6801 0.0012162 723.894018555429 727.901734389391 90.989 0.65026 90.989 90.72 91.371 0 196 39 8 0 0 0 7.2066E-09 2 49655 117.94 117.94 1 0.83193 0.66807 0 14852000 6902100 7949700 16341 1502 6180 6325 25494;25495 25494 IETDEEESCDNAHGDANQPAR 21 0 1 Unmodified _IETDEEESCDNAHGDANQPAR_ 0 0 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.9904 3 786.656013 2356.94621 NaN NaN NaN -0.074122 -5.8308E-05 NaN NaN NaN NaN 18.704 0.25604 18.704 18.539 18.795 1.9073E-06 0 0 0 4.1109E-09 1 5616 74.953 74.941 1 NaN NaN 0 2394300 2394300 0 16342 1991 6181 6326 25496 25496 IETDEEESCDNAHGDANQPAR 21 0 1 Unmodified _IETDEEESCDNAHGDANQPAR_ 0 0 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.9907 3 786.656013 2356.94621 69896.3 0.67273 0.00052921 -0.58695 -0.00046173 0.085785 6.7483E-05 786.655922109541 790.326357406261 18.734 0.24448 18.734 18.617 18.861 0 76 17 6 0 0 0 6.5759E-22 3 5355 113.47 113.47 1 0.397 0.39466 0 8454500 5625100 2829400 16343 1991 6181 6326 25497;25498;25499 25499 IETDEEESCDNAHGDANQPAR 21 0 1 Unmodified _IETDEEESCDNAHGDANQPAR_ 0 0 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 786.9913 3 786.656013 2356.94621 68875.27 0.13284 0.0001045 0.48228 0.00037939 0.61512 0.00048389 787.324827375496 789.992085275604 20.732 0.2726 20.732 20.595 20.868 0 84 22 6 0 0 0 0.047128 1 6094 11.158 11.158 1 0.92304 0.77678 0 3075100 1433600 1641500 16344 1991 6181 6326 25500 25500 IETDEEESCDNAHGDANQPAR 21 0 1 Unmodified _IETDEEESCDNAHGDANQPAR_ 0 0 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.9921 3 786.656013 2356.94621 68168.84 0.17269 0.00013585 0.22106 0.0001739 0.39376 0.00030975 786.990725776934 789.992408314127 20.733 0.33115 20.733 20.606 20.937 1.9073E-06 106 16 11 0 0 0 2.6793E-07 2 5538 55.127 55.127 1 1.2201 1.0664 0 3549200 1412400 2136800 16345 1991 6181 6326 25501;25502 25501 IETDLPQIR 9 0 1 Unmodified _IETDLPQIR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.8032 2 542.803488 1083.59242 NaN NaN NaN 0.53242 0.000289 NaN NaN NaN NaN 72.206 0.097542 72.206 72.16 72.258 0 0 0 0 0.013135 1 43332 64.265 26.537 1 NaN NaN 0 3749900 3749900 0 16346 1270 6182 6327 25503 25503 IETIEVMEDR 10 0 1 Oxidation (M) _IETIEVM(ox)EDR_ IETIEVM(1)EDR IETIEVM(70.55)EDR 0 1 0 P51991;B4E3E6;B4DDB6;Q65ZQ3 P51991 P51991 HNRNPA3;HNRPA3;D10S102 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.8003 2 625.800285 1249.58602 75588.1 0.72399 0.00045307 0.1595 9.9816E-05 0.88349 0.00055289 625.800122005036 631.306197385402 49.285 0.6488 49.285 48.904 49.553 0 139 46 5 0 0 0 0.0010258 1 26829 70.552 70.552 1 1.5556 1.5758 0 28324000 13571000 14753000 16347 1598 6183 6328 25504 25504 1379 IETIEVMEDR 10 0 1 Oxidation (M) _IETIEVM(ox)EDR_ IETIEVM(1)EDR IETIEVM(61.65)EDR 0 1 0 P51991;B4E3E6;B4DDB6;Q65ZQ3 P51991 P51991 HNRNPA3;HNRPA3;D10S102 Heterogeneous nuclear ribonucleoprotein A3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8072 2 625.800285 1249.58602 NaN NaN NaN 0.18431 0.00011534 NaN NaN NaN NaN 47.79 0.54322 47.79 47.646 48.189 0 0 0 0 0.0036221 1 26584 61.65 38.221 1 NaN NaN 0 28353000 0 28353000 16348 1598 6183 6328 25505 25505 1379 IETKPCGEELK 11 2 0 Unmodified _IETKPCGEELK_ 0 0 1 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.566 3 435.223594 1302.64895 89317.91 -0.32842 -0.00014293 -0.16042 -6.9819E-05 -0.48884 -0.00021275 435.223460074149 440.566437095018 23.667 0.33725 23.667 23.531 23.868 0 79 15 7 0 0 0 0.014648 1 9537 38.021 28.334 1 0.84858 1.0018 0 49657000 25392000 24265000 16349 2125 6184 6329 25506 25506 IETKPCGEELK 11 2 0 Unmodified _IETKPCGEELK_ 0 0 1 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 440.5667 3 435.223594 1302.64895 90047.48 -0.28507 -0.00012407 0.44299 0.0001928 0.15791 6.8727E-05 435.223839134613 440.566524901661 26.18 0.52032 26.18 25.943 26.463 0 105 21 9 0 0 0 0.041393 1 9812 29.245 24.729 1 1.1686 1.0023 0 8012100 3604700 4407400 16350 2125 6184 6329 25507 25507 IETLDPALIRPGR 13 0 2 Unmodified _IETLDPALIRPGR_ 0 0 1 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.9562 3 484.284064 1449.83036 87313.19 0.31446 0.00015229 0.024706 1.1964E-05 0.33917 0.00016425 484.284169563151 490.956254075038 79.741 0.67888 79.741 79.529 80.207 -7.6294E-06 212 58 5 0 0 0 0.00058941 1 47305 58.487 58.487 1 2.2351 2.4188 0 22516000 5590600 16925000 16351 1634 6185 6330 25508 25508 IETNENNLESAK 12 1 0 Unmodified _IETNENNLESAK_ 0 0 0 B3KVX6;Q8TB01;Q6NWZ1;A0A024RBH2;Q07065 B3KVX6 B3KVX6 CKAP4 Cytoskeleton-associated protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3306 2 681.330795 1360.64704 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.057 1 27.057 26.557 27.557 0 0 0 0 0.0068724 1 12340 61.353 28.091 1 16352 338 6186 6331 25509 25509 IETNENNLESAK 12 1 0 Unmodified _IETNENNLESAK_ 0 0 0 B3KVX6;Q8TB01;Q6NWZ1;A0A024RBH2;Q07065 B3KVX6 B3KVX6 CKAP4 Cytoskeleton-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.3376 2 681.330795 1360.64704 76979.82 0.58957 0.00040169 -0.0022988 -1.5663E-06 0.58727 0.00040013 681.331021832278 685.337285211493 26.616 0.20478 26.616 26.54 26.745 -1.9073E-06 24 9 4 0 0 0 7.1571E-05 2 12044 97.456 76.586 1 1.1857 1.1878 0 6790700 3328400 3462300 16353 338 6186 6331 25510;25511 25510 IETSINLAWTAGSNNTR 17 0 1 Unmodified _IETSINLAWTAGSNNTR_ 0 0 0 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.9738 2 924.465946 1846.91734 64337.7 0.75668 0.00069952 -0.061615 -5.6961E-05 0.69506 0.00064256 924.465978102458 929.46993315425 95.107 0.83382 95.107 94.774 95.607 0 276 65 6 0 0 0 7.752E-05 2 58019 63.727 63.727 1 1.3451 1.3635 0 28552000 11325000 17228000 16354 2124 6187 6332 25512;25513 25513 IETSINLAWTAGSNNTR 17 0 1 Unmodified _IETSINLAWTAGSNNTR_ 0 0 0 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 924.4662 2 924.465946 1846.91734 64231.92 0.76078 0.00070331 -0.15766 -0.00014575 0.60312 0.00055756 924.465986112322 929.971447466507 94.422 0.73392 94.422 94.148 94.882 0 287 61 7 0 0 0 3.062E-07 3 58606 122.1 122.1 1 1.3525 1.5051 0 43511000 16070000 27441000 16355 2124 6187 6332 25514;25515;25516 25516 IETSINLAWTAGSNNTR 17 0 1 Unmodified _IETSINLAWTAGSNNTR_ 0 0 0 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 929.4709 2 924.465946 1846.91734 63457.02 0.77177 0.00071348 -0.42898 -0.00039658 0.34279 0.0003169 924.967379299497 929.469903112567 108.35 0.69469 108.35 108.04 108.73 0 130 34 6 0 0 0 7.222E-05 2 62162 68.262 68.262 1 2.3876 2.053 0 6752500 1904300 4848200 16356 2124 6187 6332 25517;25518 25518 IETSINLAWTAGSNNTR 17 0 1 Unmodified _IETSINLAWTAGSNNTR_ 0 0 0 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 929.4706 2 924.465946 1846.91734 63695.96 0.48232 0.00044589 -0.58206 -0.0005381 -0.099744 -9.221E-05 924.465922046949 929.469927049503 108.25 0.70976 108.25 107.94 108.65 0 129 35 6 0 0 0 0.00019765 1 61203 49.929 46.706 1 2.3269 1.9321 0 5861500 1491900 4369700 16357 2124 6187 6332 25519 25519 IETVISDEEVIK 12 1 0 Unmodified _IETVISDEEVIK_ 0 0 0 Q9H8H0;J3QR28;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.8792 2 687.871765 1373.72898 73037.68 0.80073 0.0005508 0.46387 0.00031909 1.2646 0.00086989 687.872811611559 691.878747472839 82.411 0.96986 82.411 81.847 82.816 0 393 67 8 0 0 0 9.1081E-06 2 49030 108.47 85.355 1 0.95061 1.084 0 174910000 86734000 88178000 16358 2042 6188 6333 25520;25521 25520 IETVISDEEVIK 12 1 0 Unmodified _IETVISDEEVIK_ 0 0 0 Q9H8H0;J3QR28;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.8797 2 687.871765 1373.72898 72992.26 0.81007 0.00055722 0.4817 0.00033135 1.2918 0.00088857 687.872689004547 691.878743377061 81.376 0.91195 81.376 80.866 81.778 0 399 77 8 0 0 0 4.9192E-18 2 49584 145.34 145.34 1 0.90119 1.0507 0 257280000 130670000 126600000 16359 2042 6188 6333 25522;25523 25522 IETVISDEEVIK 12 1 0 Unmodified _IETVISDEEVIK_ 0 0 0 Q9H8H0;J3QR28;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.8792 2 687.871765 1373.72898 73293.97 0.61631 0.00042394 0.054653 3.7594E-05 0.67096 0.00046153 687.871679543735 691.878810395424 94.328 1.0758 94.328 93.757 94.833 0 393 69 11 0 0 0 0.00021299 3 52684 89.171 89.171 1 1.2463 1.0153 0 31549000 12865000 18683000 16360 2042 6188 6333 25524;25525;25526 25524 IETVISDEEVIK 12 1 0 Unmodified _IETVISDEEVIK_ 0 0 0 Q9H8H0;J3QR28;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 691.8791 2 687.871765 1373.72898 72591.28 0.66601 0.00045813 0.36826 0.00025332 1.0343 0.00071145 687.871900254724 691.878999808665 94.264 1.0102 94.264 93.833 94.844 0 383 63 9 0 0 0 0.00018715 2 51774 90.685 90.685 1 1.3196 1.081 0 27083000 12216000 14867000 16361 2042 6188 6333 25527;25528 25527 IEVIEIMTDR 10 0 1 Oxidation (M) _IEVIEIM(ox)TDR_ IEVIEIM(1)TDR IEVIEIM(87.91)TDR 0 1 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;F8VTQ5;H0YH80 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.8218 2 617.821021 1233.62749 76217.98 0.59958 0.00037043 -0.75041 -0.00046362 -0.15083 -9.3184E-05 617.821298117358 622.824912514879 78.111 0.85838 78.111 77.634 78.492 0 298 69 9 0 0 0 0.00018807 1 46015 87.913 47.868 1 2.8138 3.0354 0 48208000 14756000 33451000 16362 317 6189 6334 25529 25529 241 IEVIEIMTDR 10 0 1 Oxidation (M) _IEVIEIM(ox)TDR_ IEVIEIM(1)TDR IEVIEIM(117.31)TDR 0 1 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;F8VTQ5;H0YH80 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.8242 2 617.821021 1233.62749 NaN NaN NaN 0.47339 0.00029247 NaN NaN NaN NaN 78.033 0.799 78.033 77.312 78.111 0 0 0 0 3.887E-09 1 45949 117.31 56.63 1 NaN NaN 0 46312000 0 46312000 16363 317 6189 6334 25530 25530 241 IEVIEIMTDR 10 0 1 Oxidation (M) _IEVIEIM(ox)TDR_ IEVIEIM(1)TDR IEVIEIM(96.89)TDR 0 1 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;F8VTQ5;H0YH80 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8246 2 617.821021 1233.62749 NaN NaN NaN -0.35747 -0.00022085 NaN NaN NaN NaN 77.054 1.2834 77.054 76.244 77.528 0 0 0 0 3.0279E-05 2 46402 96.89 37.001 1 NaN NaN 0 51308000 0 51308000 16364 317 6189 6334 25531;25532 25531 241 IEVIEIMTDR 10 0 1 Oxidation (M) _IEVIEIM(ox)TDR_ IEVIEIM(1)TDR IEVIEIM(71.35)TDR 0 1 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;F8VTQ5;H0YH80 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.8218 2 617.821021 1233.62749 78455.09 0.7245 0.00044761 -0.22779 -0.00014073 0.49671 0.00030688 617.821192029036 622.824920692666 88.889 0.83932 88.889 88.442 89.281 0 262 53 9 0 0 0 0.00094113 2 49010 71.349 36.054 1 0.67375 0.56274 0 3260300 2005500 1254800 16365 317 6189 6334 25533;25534 25533 241 IEVIEIMTDR 10 0 1 Oxidation (M) _IEVIEIM(ox)TDR_ IEVIEIM(1)TDR IEVIEIM(56.56)TDR 0 1 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;F8VTQ5;H0YH80 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.3253 2 617.821021 1233.62749 78167.34 0.2967 0.00018331 -0.63945 -0.00039506 -0.34275 -0.00021176 617.820994446003 622.8247014912 88.95 0.85455 88.95 88.465 89.319 -7.6294E-06 255 53 9 0 0 0 0.0039137 1 48209 56.563 27.476 1 0.70075 0.60135 0 2818800 1551700 1267100 16366 317 6189 6334 25535 25535 241 IEVLEEELR 9 0 1 Unmodified _IEVLEEELR_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.308 2 565.308603 1128.60265 NaN NaN NaN 0.023262 1.315E-05 NaN NaN NaN NaN 80.67 0.50676 80.67 80.351 80.857 0 0 0 0 8.1393E-05 1 47889 101.64 30.264 1 NaN NaN 0 16365000 16365000 0 16367 1486 6190 6335 25536 25536 IEVLEEELR 9 0 1 Unmodified _IEVLEEELR_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.308 2 565.308603 1128.60265 NaN NaN NaN -0.35208 -0.00019904 NaN NaN NaN NaN 79.576 0.46846 79.576 79.294 79.763 0 0 0 0 0.001033 1 48289 88.37 14.069 1 NaN NaN 0 13814000 13814000 0 16368 1486 6190 6335 25537 25537 IEVLEEELR 9 0 1 Unmodified _IEVLEEELR_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.3109 2 565.308603 1128.60265 81385.02 0.37069 0.00020956 0.13492 7.6269E-05 0.50561 0.00028583 565.308394599922 570.312796348166 92.153 0.4724 92.153 91.866 92.339 0 97 25 5 0 0 0 0.063364 1 50454 41.029 25.367 1 0.39368 0.34114 0 2679700 1748100 931560 16369 1486 6190 6335 25538 25538 IEVPLYSLLEQTHLK 15 1 0 Unmodified _IEVPLYSLLEQTHLK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.3392 3 595.004855 1781.99274 78728.28 0.97127 0.00057791 -0.24645 -0.00014664 0.72482 0.00043127 595.004743325406 598.0104091966 121.43 0.63574 121.43 121.15 121.78 0 233 40 8 0 0 0 0.00089374 2 78433 43.592 43.592 1 2.0269 2.2051 0 48356000 14325000 34031000 16370 390 6191 6336 25539;25540 25540 IEVPLYSLLEQTHLK 15 1 0 Unmodified _IEVPLYSLLEQTHLK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.6762 3 595.004855 1781.99274 79246.78 1.016 0.00060452 -0.2724 -0.00016208 0.74359 0.00044244 595.004792887403 597.675989169335 120.77 0.53221 120.77 120.53 121.07 0 209 35 8 0 0 0 0.00070554 2 79689 45.33 45.33 1 1.9767 2.0118 0 30511000 10227000 20284000 16371 390 6191 6336 25541;25542 25541 IEVPLYSLLEQTHLK 15 1 0 Unmodified _IEVPLYSLLEQTHLK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.0107 3 595.004855 1781.99274 78778.4 0.71389 0.00042477 -0.049738 -2.9594E-05 0.66416 0.00039518 595.339233589074 598.010627807478 133.57 0.55685 133.57 133.35 133.91 0 116 22 8 0 0 0 0.044979 1 81292 17.489 17.489 1 1.4922 1.1811 0 4999200 2040200 2958900 16372 390 6191 6336 25543 25543 IEVPLYSLLEQTHLK 15 1 0 Unmodified _IEVPLYSLLEQTHLK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.0129 3 595.004855 1781.99274 79527.19 1.0796 0.00064239 -0.32426 -0.00019294 0.75538 0.00044946 595.004665279657 598.010546768825 133.23 0.45889 133.23 132.99 133.44 0 67 18 6 0 0 0 0.002885 1 80202 35.329 35.329 1 1.3854 1.1229 0 4389200 1992300 2396900 16373 390 6191 6336 25544 25544 IEVQDTSGGTTALRPSASTQALSSSVSSSK 30 1 1 Unmodified _IEVQDTSGGTTALRPSASTQALSSSVSSSK_ 0 0 1 Q16531;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.4985 3 984.83006 2951.46835 60539.73 0.22131 0.00021795 0.12139 0.00011955 0.3427 0.0003375 985.164416162332 991.17196831867 72.997 0.59796 72.997 72.737 73.335 0 457 50 13 0 0 0 4.7016E-55 3 42700 145.29 145.29 1 0.67586 0.82066 0 374570000 211110000 163460000 16374 1770 6192 6337 25545;25546;25547 25547 IEVQDTSGGTTALRPSASTQALSSSVSSSK 30 1 1 Unmodified _IEVQDTSGGTTALRPSASTQALSSSVSSSK_ 0 0 1 Q16531;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 991.1702 3 984.83006 2951.46835 61036.88 0.20582 0.0002027 0.086915 8.5597E-05 0.29274 0.0002883 985.164547582541 991.171813139705 71.924 0.62045 71.924 71.657 72.278 0 454 54 12 0 0 0 5.4935E-55 2 43054 144.4 144.4 1 0.69152 0.8202 0 277770000 169460000 108320000 16375 1770 6192 6337 25548;25549 25549 IEVQDTSGGTTALRPSASTQALSSSVSSSK 30 1 1 Unmodified _IEVQDTSGGTTALRPSASTQALSSSVSSSK_ 0 0 1 Q16531;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 991.1724 3 984.83006 2951.46835 60377.03 0.15259 0.00015028 0.18482 0.00018201 0.33741 0.00033229 985.164564247693 991.17196713496 83.94 0.99638 83.94 83.636 84.632 0 675 79 13 0 0 0 2.2459E-28 6 45702 108.71 108.71 1 1.1093 1.0039 0 142170000 62293000 79878000 16376 1770 6192 6337 25550;25551;25552;25553;25554;25555 25551 IEVQDTSGGTTALRPSASTQALSSSVSSSK 30 1 1 Unmodified _IEVQDTSGGTTALRPSASTQALSSSVSSSK_ 0 0 1 Q16531;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 985.1635 3 984.83006 2951.46835 60680.52 0.35359 0.00034823 -0.15449 -0.00015214 0.19911 0.00019609 985.164255720878 991.171682168813 84.015 1.077 84.015 83.735 84.812 -7.6294E-06 727 84 14 0 0 0 3.0052E-23 4 44957 96.123 96.123 1 1.1226 0.96039 0 110760000 50382000 60382000 16377 1770 6192 6337 25556;25557;25558;25559 25557 IEVSLQPEVPPSK 13 1 0 Unmodified _IEVSLQPEVPPSK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.9037 2 711.895574 1421.7766 73426.18 0.95061 0.00067674 -0.0051173 -3.6429E-06 0.94549 0.00067309 711.895504073108 715.902788094782 82.427 1.5158 82.427 81.73 83.246 0 531 129 7 0 0 0 1.8372E-14 3 49070 137.16 137.16 1 0.91829 1.0365 0 79436000 39535000 39901000 16378 2042 6193 6338 25560;25561;25562 25561 IEVSLQPEVPPSK 13 1 0 Unmodified _IEVSLQPEVPPSK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.9031 2 711.895574 1421.7766 73192.05 0.87983 0.00062635 -0.12098 -8.6125E-05 0.75885 0.00054022 711.895605527958 715.902558315664 81.394 1.6041 81.394 80.852 82.456 0 539 139 7 0 0 0 3.4236E-19 3 49591 147.62 147.62 1 0.92088 1.0332 0 77459000 40898000 36561000 16379 2042 6193 6338 25563;25564;25565 25564 IEVSLQPEVPPSK 13 1 0 Unmodified _IEVSLQPEVPPSK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 711.8955 2 711.895574 1421.7766 72766.51 0.76665 0.00054578 0.40044 0.00028507 1.1671 0.00083085 711.895781440074 715.902711381561 94.392 1.5368 94.392 93.561 95.098 0 425 101 7 0 0 0 0.002308 3 52957 54.286 54.286 1 1.2099 0.95482 0 5380500 2170300 3210200 16380 2042 6193 6338 25566;25567;25568 25568 IEVSLQPEVPPSK 13 1 0 Unmodified _IEVSLQPEVPPSK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 715.9042 2 711.895574 1421.7766 72965.67 0.72348 0.00051504 0.46588 0.00033166 1.1894 0.0008467 711.896282815103 715.902826156447 94.28 1.7341 94.28 93.363 95.098 0 504 112 8 0 0 0 0.00045909 3 51661 61.815 61.815 1 1.1909 0.97306 0 5598300 2500500 3097800 16381 2042 6193 6338 25569;25570;25571 25570 IEWLESHQDADIEDFK 16 1 0 Unmodified _IEWLESHQDADIEDFK_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.975 3 658.974172 1973.90069 NaN NaN NaN 0.11009 7.2546E-05 NaN NaN NaN NaN 92.684 0.46564 92.684 92.438 92.904 0 0 0 0 0.047189 1 56243 25.319 19.891 1 NaN NaN 0 7137100 7137100 0 16382 1466 6194 6339 25572 25572 IEYEPFRK 8 1 1 Unmodified _IEYEPFRK_ 0 0 1 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 361.1945 3 361.194075 1080.5604 102787.7 -0.059956 -2.1656E-05 0.29815 0.00010769 0.2382 8.6035E-05 361.193950649008 367.201565859234 38.747 0.39584 38.747 38.612 39.008 -3.8147E-06 92 34 4 0 0 0 0.030426 1 20413 28.945 28.945 1 1.3896 1.5674 0 14514000 6053400 8460700 16383 511 6195 6340 25573 25573 IEYNDQNDGSCDVK 14 1 0 Unmodified _IEYNDQNDGSCDVK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.8492 2 828.843941 1655.67333 NaN NaN NaN -0.60337 -0.0005001 NaN NaN NaN NaN 26.444 0.15069 26.444 26.338 26.489 0 0 0 0 0.012656 1 11887 50.284 43.9 1 NaN NaN 0 1593700 0 1593700 16384 1402 6196 6341 25574 25574 IEYVTVTPEGFR 12 0 1 Unmodified _IEYVTVTPEGFR_ 0 0 0 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.8702 2 705.866817 1409.71908 75153.63 0.59362 0.00041901 0.19432 0.00013717 0.78794 0.00055618 705.866996724292 710.870866184444 92.535 0.46478 92.535 92.356 92.82 0 93 43 4 0 0 0 0.0013458 1 56104 72.006 72.006 1 1.0537 1.0713 0 7359100 3316300 4042800 16385 1870 6197 6342 25575 25575 IEYVTVTPEGFR 12 0 1 Unmodified _IEYVTVTPEGFR_ 0 0 0 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.8707 2 705.866817 1409.71908 NaN NaN NaN 0.22349 0.00015775 NaN NaN NaN NaN 91.76 0.45625 91.76 91.593 92.05 0 0 0 0 0.0011461 1 56940 81.338 58.598 1 NaN NaN 0 5646800 0 5646800 16386 1870 6197 6342 25576 25576 IFAKPEEQR 9 1 1 Unmodified _IFAKPEEQR_ 0 0 1 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.2134 3 373.204862 1116.59276 99484.89 -0.076375 -2.8504E-05 0.61235 0.00022853 0.53597 0.00020003 373.20491309314 379.212712403274 20.939 0.37356 20.939 20.754 21.127 0 77 16 7 0 0 0 0.0042288 1 7151 62.823 54.898 1 0.92729 1.0513 0 17009000 8463200 8545400 16387 1721 6198 6343 25577 25577 IFAKPEEQR 9 1 1 Unmodified _IFAKPEEQR_ 0 0 1 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.304 2 559.303655 1116.59276 80669.35 0.35952 0.00020108 0.55118 0.00030828 0.9107 0.00050936 559.303844688796 568.315188568261 20.957 0.28225 20.957 20.829 21.111 0 50 13 5 0 0 0 0.026624 1 7185 67.993 51.216 1 0.81106 0.91251 0 13447000 7054200 6392800 16388 1721 6198 6343 25578 25578 IFAPNHVVAK 10 1 0 Unmodified _IFAPNHVVAK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.882 3 365.881831 1094.62366 97099.28 0.32905 0.00012039 -0.42087 -0.00015399 -0.091819 -3.3595E-05 365.881744181945 368.553068071008 37.384 1.1238 37.384 37.075 38.199 0 601 94 10 0 0 0 0.002263 2 18978 57.55 57.55 1 0.96174 1.1566 0 1212400000 627120000 585230000 16389 1003 6199 6344 25579;25580 25580 IFAPNHVVAK 10 1 0 Unmodified _IFAPNHVVAK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.3264 2 548.319109 1094.62366 80909.73 0.80836 0.00044324 0.050463 2.767E-05 0.85882 0.00047091 548.319034806681 552.326224685617 37.384 0.86045 37.384 37.122 37.982 0 342 71 8 0 0 0 4.3914E-06 2 18949 132.08 132.08 1 0.89814 1.0625 0 418420000 222860000 195560000 16390 1003 6199 6344 25581;25582 25582 IFAPNHVVAK 10 1 0 Unmodified _IFAPNHVVAK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 368.5527 3 365.881831 1094.62366 97082.92 0.21889 8.0088E-05 -0.50655 -0.00018534 -0.28766 -0.00010525 365.881812344518 368.553018475321 35.908 0.97687 35.908 35.666 36.643 0 483 80 10 0 0 0 0.0088732 2 18285 43.272 43.272 1 0.90754 1.0723 0 1301100000 657190000 643960000 16391 1003 6199 6344 25583;25584 25583 IFAPNHVVAK 10 1 0 Unmodified _IFAPNHVVAK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.3264 2 548.319109 1094.62366 81464.62 0.5425 0.00029746 -0.092625 -5.0788E-05 0.44988 0.00024668 548.319035961484 552.326053154553 35.908 0.49018 35.908 35.689 36.18 0 130 39 6 0 0 0 8.2021E-12 2 18300 153.71 153.71 1 1.0411 1.226 0 480360000 237360000 243010000 16392 1003 6199 6344 25585;25586 25585 IFAPNHVVAK 10 1 0 Unmodified _IFAPNHVVAK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.3264 2 548.319109 1094.62366 80971.19 0.38497 0.00021109 0.12505 6.857E-05 0.51003 0.00027966 548.319027391749 552.326218888019 41.904 0.79543 41.904 41.67 42.465 0 337 62 8 0 0 0 0.0091658 2 19467 69.628 69.628 1 1.0423 0.83091 0 19852000 9265400 10587000 16393 1003 6199 6344 25587;25588 25588 IFAPNHVVAK 10 1 0 Unmodified _IFAPNHVVAK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.3195 2 548.319109 1094.62366 80884.57 0.22998 0.0001261 0.11939 6.5466E-05 0.34937 0.00019157 548.319067975688 552.326183714998 41.697 0.88974 41.697 41.417 42.307 -3.8147E-06 350 68 8 0 0 0 0.036003 1 18757 53.878 53.878 1 1.1042 0.88698 0 17425000 8492000 8933300 16394 1003 6199 6344 25589 25589 IFAQPVSLK 9 1 0 Unmodified _IFAQPVSLK_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.8094 2 501.80276 1001.59097 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.377 1 72.377 71.877 72.877 -7.6294E-06 0 0 0 0.041169 1 42351 49.418 20.08 1 16395 162 6200 6345 25590 25590 IFAQPVSLK 9 1 0 Unmodified _IFAQPVSLK_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.8033 2 501.80276 1001.59097 NaN NaN NaN 0.76512 0.00038394 NaN NaN NaN NaN 71.192 0.7507 71.192 70.773 71.524 0 0 0 0 0.022342 1 42430 57.047 32.893 1 NaN NaN 0 10169000 10169000 0 16396 162 6200 6345 25591 25591 IFASNLK 7 1 0 Unmodified _IFASNLK_ 0 0 0 Q13895;H7BY94 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.7414 2 396.734346 791.454139 96832 0.38373 0.00015224 -0.11657 -4.6246E-05 0.26716 0.00010599 396.734069072597 400.741318693583 40.382 0.40793 40.382 40.21 40.618 0 141 34 7 0 0 0 0.013364 1 21515 103.02 36.88 1 1.1711 1.309 0 87566000 39038000 48528000 16397 1724 6201 6346 25592 25592 IFCCHGGLSPDLQSMEQIR 19 0 1 Unmodified _IFCCHGGLSPDLQSMEQIR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;F8W1A0;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 753.687 3 750.015102 2247.02348 69862.19 0.80963 0.00060724 -0.777 -0.00058276 0.03263 2.4473E-05 750.015356883682 753.349917707746 106.81 0.5854 106.81 106.65 107.23 0 179 37 10 0 0 0 1.2477E-05 2 61149 50.392 50.392 1 1.9997 1.7117 0 8673500 2768600 5904800 16398 1632;343;1633 6202 6347 25593;25594 25594 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.3829 2 731.382831 1460.75111 71277.45 0.89039 0.00065122 -0.092674 -6.778E-05 0.79772 0.00058344 731.38278264235 735.389422981775 99.985 0.721 99.985 99.733 100.45 7.6294E-06 145 64 5 0 0 0 0.0065558 2 61259 46.063 27.375 1 1.2942 1.3184 0 17944000 6794600 11150000 16399 1471;1679 6203 6348 25595;25596 25595 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3907 2 731.382831 1460.75111 70491.52 0.83704 0.0006122 0.024074 1.7607E-05 0.86112 0.00062981 731.383079763341 735.389800779882 101.11 3.205 101.11 100.25 103.45 0 1130 260 11 0 0 0 1.8934E-23 6 62346 152.7 152.7 1 0.75262 0.90003 0 842110000 480650000 361450000 16400 1471;1679 6203 6348 25597;25598;25599;25600;25601;25602 25599 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3912 2 731.382831 1460.75111 70619.65 0.88564 0.00064774 0.62984 0.00046065 1.5155 0.0011084 731.884978334965 735.390138324381 102.07 1.0179 102.07 101.86 102.87 0 399 85 9 0 0 0 5.9345E-06 1 62926 105.2 105.2 1 0.73573 0.80743 0 53389000 20874000 32515000 16401 1471;1679 6203 6348 25603 25603 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3907 2 731.382831 1460.75111 70806.35 0.76976 0.00056299 0.16439 0.00012023 0.93414 0.00068322 731.884689003391 735.389889554795 103.06 0.88358 103.06 102.7 103.58 0 166 75 4 0 0 0 1.1672E-08 1 63481 113.38 113.38 1 0.66514 0.67445 0 27723000 14272000 13451000 16402 1471;1679 6203 6348 25604 25604 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.389 2 731.382831 1460.75111 70334.29 0.82544 0.00060371 -0.45905 -0.00033574 0.36639 0.00026797 731.382628302927 735.389330337228 104.57 0.61532 104.57 104.37 104.99 7.6294E-06 122 51 5 0 0 0 0.00012265 2 64636 77.593 63.475 1 0.82789 0.81722 0 8459700 4351900 4107800 16403 1471;1679 6203 6348 25605;25606 25605 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.3845 2 731.382831 1460.75111 NaN NaN NaN 0.63266 0.00046272 NaN NaN NaN NaN 105.02 0.50573 105.02 104.72 105.23 0 0 0 0 0.00045563 1 64858 84.289 64.503 1 NaN NaN 0 6415800 6415800 0 16404 1471;1679 6203 6348 25607 25607 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3936 2 731.382831 1460.75111 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.07 1 95.07 94.57 95.57 0 0 0 0 0.027681 1 57779 44.299 18.181 1 16405 1471;1679 6203 6348 25608 25608 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3906 2 731.382831 1460.75111 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.81 1 103.81 103.31 104.31 0 0 0 0 0.0027972 1 64075 66.267 40.793 1 16406 1471;1679 6203 6348 25609 25609 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3908 2 731.382831 1460.75111 70916.87 0.76984 0.00056305 -0.34999 -0.00025597 0.41985 0.00030707 731.883915043406 735.389192589795 99.461 0.92947 99.461 98.955 99.885 0 195 76 4 0 0 0 0.00021073 2 62330 69.979 57.766 1 1.2239 1.2381 0 16442000 7888200 8553900 16407 1471;1679 6203 6348 25610;25611 25610 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3903 2 731.382831 1460.75111 70146.51 0.73604 0.00053832 0.10492 7.6738E-05 0.84096 0.00061506 731.383145669632 735.389851391609 100.48 2.4006 100.48 99.631 102.03 7.6294E-06 1326 190 10 0 0 0 4.6309E-30 6 62924 164.65 164.65 1 0.75351 0.89092 0 1606000000 918190000 687760000 16408 1471;1679 6203 6348 25612;25613;25614;25615;25616;25617 25613 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3924 2 731.382831 1460.75111 NaN NaN NaN 0.43366 0.00031717 NaN NaN NaN NaN 107.02 0.30281 107.02 106.89 107.19 0 0 0 0 0.019879 1 68297 48.004 31.43 1 NaN NaN 0 2909300 0 2909300 16409 1471;1679 6203 6348 25618 25618 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.391 2 731.382831 1460.75111 73268.95 0.76961 0.00056288 -0.28032 -0.00020502 0.4893 0.00035786 731.381525026017 735.389680179906 107.88 0.46628 107.88 107.66 108.13 -7.6294E-06 94 25 5 0 0 0 0.054953 1 61864 28.177 21.488 1 1.3996 1.1723 0 1854900 813330 1041600 16410 1471;1679 6203 6348 25619 25619 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 731.3837 2 731.382831 1460.75111 70218.82 1.0008 0.000732 -0.047538 -3.4769E-05 0.9533 0.00069723 731.383219942257 735.38981470922 113.13 3.2178 113.13 112.66 115.88 0 1050 149 13 0 0 0 9.859E-19 7 65671 142.08 132.6 1 1.2939 1.1497 0 367280000 165710000 201570000 16411 1471;1679 6203 6348 25620;25621;25622;25623;25624;25625;25626 25620 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.3902 2 731.382831 1460.75111 70346.27 0.71939 0.00052615 0.15092 0.00011038 0.87031 0.00063653 731.383349371726 735.389929141094 113.02 3.2826 113.02 112.44 115.73 7.6294E-06 1039 154 13 0 0 0 5.4382E-24 9 65288 160.18 160.18 1 1.2863 1.123 0 424060000 185170000 238890000 16412 1471;1679 6203 6348 25627;25628;25629;25630;25631;25632;25633;25634;25635 25631 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.3907 2 731.382831 1460.75111 70743.99 0.73305 0.00053614 -1.4584 -0.0010666 -0.72531 -0.00053048 731.383549535389 735.389804040099 118.25 0.57442 118.25 118 118.57 0 78 26 5 0 0 0 0.0048007 2 69081 48.044 40.399 1 1.129 0.88231 0 2097000 1083100 1013800 16413 1471;1679 6203 6348 25636;25637 25637 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.3834 2 731.382831 1460.75111 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.49 1 115.49 114.99 115.99 0 0 0 0 0.014836 1 66759 51.013 32.268 1 16414 1471;1679 6203 6348 25638 25638 IFDIDEAEEGVK 12 1 0 Unmodified _IFDIDEAEEGVK_ 0 0 0 Q6IBR8;B5BU01;P20042 Q6IBR8 Q6IBR8 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.8391 2 682.83264 1363.65073 NaN NaN NaN -0.96162 -0.00065662 NaN NaN NaN NaN 85.695 0.41031 85.695 85.413 85.823 0 0 0 0 0.00059186 1 51443 87.298 68.986 1 NaN NaN 0 6512000 0 6512000 16415 1073 6204 6349 25639 25639 IFDIDEAEEGVK 12 1 0 Unmodified _IFDIDEAEEGVK_ 0 0 0 Q6IBR8;B5BU01;P20042 Q6IBR8 Q6IBR8 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.3397 2 682.83264 1363.65073 NaN NaN NaN -1.2968 -0.00088548 NaN NaN NaN NaN 84.755 0.43669 84.755 84.556 84.993 7.6294E-06 0 0 0 1.6659E-05 1 52111 101.97 85.136 1 NaN NaN 0 9459000 0 9459000 16416 1073 6204 6349 25640 25640 IFDIDEAEEGVK 12 1 0 Unmodified _IFDIDEAEEGVK_ 0 0 0 Q6IBR8;B5BU01;P20042 Q6IBR8 Q6IBR8 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.8391 2 682.83264 1363.65073 NaN NaN NaN 0.54614 0.00037292 NaN NaN NaN NaN 97.793 0.41118 97.793 97.6 98.011 0 0 0 0 0.050972 1 54315 41.689 34.044 1 NaN NaN 0 658500 0 658500 16417 1073 6204 6349 25641 25641 IFDLGR 6 0 1 Unmodified _IFDLGR_ 0 0 0 X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9;Q96L21 X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 360.7055 2 360.705589 719.396624 98810.95 0.075576 2.7261E-05 0.03083 1.1121E-05 0.10641 3.8381E-05 360.705514641086 365.70963655839 63.607 2.2927 63.607 62.872 65.164 -3.8147E-06 823 212 6 0 0 0 0.042873 1 36583 105.42 27.512 1 0.90572 1.0724 0 392280000 204140000 188150000 16418 1524 6205 6350 25642 25642 IFDLIGLPPEDDWPR 15 0 1 Unmodified _IFDLIGLPPEDDWPR_ 0 0 0 F8VZZ0;F8VZ51;Q6LC83;A0A024RBB6;P11802 F8VZZ0 F8VZZ0 CDK4 Cyclin-dependent kinase 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.4575 2 891.956694 1781.89884 NaN NaN NaN -2.003 -0.0017865 NaN NaN NaN NaN 130.23 0.15359 130.23 130.13 130.28 0 0 0 0 0.035117 1 87034 39.625 18.161 1 NaN NaN 0 1655100 0 1655100 16419 331 6206 6351 25643 25643 IFEAISSMFPDK 12 1 0 Oxidation (M) _IFEAISSM(ox)FPDK_ IFEAISSM(1)FPDK IFEAISSM(57.35)FPDK 0 1 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;B7Z8K5;Q6R125;G3XAL2;Q59H64;B7Z8L6 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.849 2 700.841953 1399.66935 73747.64 1.1148 0.00078132 -0.13772 -9.6517E-05 0.97712 0.00068481 701.343199025245 704.848888759064 93.088 0.59537 93.088 92.807 93.402 7.6294E-06 125 50 4 0 0 0 0.0014176 1 56427 57.348 39.484 1 1.6935 1.7494 0 11021000 4958300 6062900 16420 456 6207 6352 25644 25644 323 IFEAISSMFPDK 12 1 0 Oxidation (M) _IFEAISSM(ox)FPDK_ IFEAISSM(1)FPDK IFEAISSM(52.79)FPDK 0 1 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;B7Z8K5;Q6R125;G3XAL2;Q59H64;B7Z8L6 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8409 2 700.841953 1399.66935 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.314 1 92.314 91.814 92.814 0 0 0 0 0.0080623 1 55940 52.79 34.01 1 16421 456 6207 6352 25645 25645 323 IFEAISSMFPDK 12 1 0 Oxidation (M) _IFEAISSM(ox)FPDK_ IFEAISSM(1)FPDK IFEAISSM(57.79)FPDK 0 1 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;B7Z8K5;Q6R125;G3XAL2;Q59H64;B7Z8L6 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.8488 2 700.841953 1399.66935 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.324 1 92.324 91.824 92.824 0 0 0 0 0.004214 1 57198 57.785 39.005 1 16422 456 6207 6352 25646 25646 323 IFEGTNDILR 10 0 1 Unmodified _IFEGTNDILR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;G3V1M7;J3QRJ8;J3KSR4 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.3151 2 589.31422 1176.61389 NaN NaN NaN -0.1685 -9.9299E-05 NaN NaN NaN NaN 80.952 0.5473 80.952 80.811 81.358 0 0 0 0 0.014744 1 48268 58.433 30.551 1 NaN NaN 0 6574600 6574600 0 16423 965 6208 6353 25647 25647 IFEGTNDILR 10 0 1 Unmodified _IFEGTNDILR_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;G3V1M7;J3QRJ8;J3KSR4 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.3146 2 589.31422 1176.61389 81879.42 0.85336 0.00050289 -0.085333 -5.0288E-05 0.76802 0.00045261 589.314364227155 594.318270831037 79.962 0.54594 79.962 79.752 80.298 0 155 42 5 0 0 0 0.0033968 1 48655 64.711 44.715 1 1.1878 1.2021 0 20004000 7665000 12339000 16424 965 6208 6353 25648 25648 IFEPPPPK 8 1 0 Unmodified _IFEPPPPK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.7635 2 462.763104 923.511654 89114.33 0.36291 0.00016794 0.92787 0.00042938 1.2908 0.00059733 462.763270111653 466.770478991457 44.899 0.9227 44.899 44.569 45.492 0 302 83 6 0 0 0 0.011877 2 24131 68.915 35.177 1 1.2189 1.3745 0 76840000 34424000 42416000 16425 1379 6209 6354 25649;25650 25650 IFEPPPPK 8 1 0 Unmodified _IFEPPPPK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.7635 2 462.763104 923.511654 88435.75 0.52652 0.00024366 0.52867 0.00024465 1.0552 0.0004883 462.76312502194 466.770396569198 44.064 0.69186 44.064 43.802 44.494 0 240 61 6 0 0 0 0.0078194 2 24059 81.297 36.686 1 1.1947 1.3383 0 111310000 50294000 61016000 16426 1379 6209 6354 25651;25652 25652 IFEPPPPK 8 1 0 Unmodified _IFEPPPPK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 462.7633 2 462.763104 923.511654 87231.59 0.029246 1.3534E-05 0.86069 0.0003983 0.88994 0.00041183 462.763193228471 466.770623849838 51.506 0.67025 51.506 51.113 51.783 0 191 49 5 0 0 0 0.016916 1 25308 60.788 25.682 1 1.2762 1.0063 0 5510900 2266500 3244400 16427 1379 6209 6354 25653 25653 IFEPPPPK 8 1 0 Unmodified _IFEPPPPK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.7712 2 462.763104 923.511654 88804.13 -0.043736 -2.024E-05 0.9009 0.0004169 0.85716 0.00039666 462.763259320109 466.770728578727 51.702 0.86292 51.702 51.276 52.139 0 220 59 5 0 0 0 0.044697 2 24838 51.787 22.336 1 1.1961 0.95617 0 4138400 1918500 2219900 16428 1379 6209 6354 25654;25655 25654 IFESVTLPSNR 11 0 1 Unmodified _IFESVTLPSNR_ 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.8453 2 631.840602 1261.66665 76100.84 0.54545 0.00034464 0.25333 0.00016007 0.79878 0.0005047 631.840755146369 636.844959186896 90.445 0.66031 90.445 90.222 90.883 0 159 40 6 0 0 0 0.0005685 1 50095 74.162 69.379 1 1.7063 1.4596 0 5914700 2014800 3899900 16429 1680 6210 6355 25656 25656 IFESVTLPSNR 11 0 1 Unmodified _IFESVTLPSNR_ 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8457 2 631.840602 1261.66665 77625.59 0.46822 0.00029584 0.10321 6.5211E-05 0.57143 0.00036105 631.840651905177 636.844699847581 90.367 0.59203 90.367 90.174 90.767 0 157 36 6 0 0 0 0.0019892 1 49304 63.283 58.5 1 1.5404 1.2783 0 5781300 2114900 3666400 16430 1680 6210 6355 25657 25657 IFETLQDK 8 1 0 Unmodified _IFETLQDK_ 0 0 0 Q8N523;A0A024R1I7;Q9UBB9;B4DPE5 Q8N523 Q8N523 TFIP11 Tuftelin-interacting protein 11 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2744 2 497.266207 992.517862 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.917 1 50.917 50.417 51.417 0 0 0 0 0.027289 1 28799 64.207 16.292 1 16431 77 6211 6356 25658 25658 IFEYETQR 8 0 1 Unmodified _IFEYETQR_ 0 0 0 P50402 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.2709 2 543.266739 1084.51892 80721.95 0.78036 0.00042394 -0.17809 -9.675E-05 0.60227 0.00032719 543.266695945513 548.270693925602 43.597 1.2594 43.597 42.961 44.22 0 382 107 6 0 0 0 0.0029606 2 23165 98.299 87.23 1 0.54643 0.59923 0 53437000 33129000 20307000 16432 1590 6212 6357 25659;25660 25659 IFEYETQR 8 0 1 Unmodified _IFEYETQR_ 0 0 0 P50402 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.2667 2 543.266739 1084.51892 80926.66 0.66438 0.00036093 0.24293 0.00013198 0.90731 0.00049291 543.267101960357 548.270751946986 42.945 1.2433 42.945 42.184 43.428 3.8147E-06 388 103 6 0 0 0 0.0011347 3 23130 111.82 98.827 1 0.62847 0.72118 0 80389000 46897000 33492000 16433 1590 6212 6357 25661;25662;25663 25662 IFEYETQR 8 0 1 Unmodified _IFEYETQR_ 0 0 0 P50402 P50402 P50402 EMD Emerin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.2702 2 543.266739 1084.51892 NaN NaN NaN -0.24967 -0.00013564 NaN NaN NaN NaN 50.149 0.83858 50.149 49.85 50.688 0 0 0 0 0.052149 1 24515 49.097 39.509 1 NaN NaN 0 2527700 0 2527700 16434 1590 6212 6357 25664 25664 IFFAGDTIPK 10 1 0 Unmodified _IFFAGDTIPK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.8124 2 554.8055 1107.59645 NaN NaN NaN -0.49142 -0.00027265 NaN NaN NaN NaN 91.378 0.3491 91.378 91.218 91.567 0 0 0 0 0.044232 1 55236 48.283 24.311 1 NaN NaN 0 5411600 0 5411600 16435 1402 6213 6358 25665 25665 IFFAGDTIPK 10 1 0 Unmodified _IFFAGDTIPK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.8062 2 554.8055 1107.59645 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.316 1 91.316 90.816 91.816 0 0 0 0 0.033075 1 55264 49.418 22.816 1 16436 1402 6213 6358 25666 25666 IFFIDPNERPVTLYHLLK 18 1 1 Unmodified _IFFIDPNERPVTLYHLLK_ 0 0 1 O95619;F8W1B9;F8VTR4 O95619 O95619 YEATS4 YEATS domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.0689 4 554.562304 2214.22011 82053.03 0.715 0.00039651 -0.076835 -4.261E-05 0.63816 0.0003539 554.812954322115 559.067804142808 127.84 0.43956 127.84 127.62 128.06 0 83 16 8 0 0 0 0.0344 2 77068 15.766 15.766 1 1.2773 1.1448 0 2044300 868520 1175800 16437 1430 6214 6359 25667;25668 25667 IFFIDPNERPVTLYHLLK 18 1 1 Unmodified _IFFIDPNERPVTLYHLLK_ 0 0 1 O95619;F8W1B9;F8VTR4 O95619 O95619 YEATS4 YEATS domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.5627 4 554.562304 2214.22011 82382.35 0.71894 0.0003987 0.14247 7.9008E-05 0.86141 0.0004777 554.813363431024 559.3185133825 127.57 0.40468 127.57 127.33 127.74 0 50 16 5 0 0 0 0.0041569 2 76010 24.538 24.538 1 1.0513 0.90797 0 2271700 1073800 1197900 16438 1430 6214 6359 25669;25670 25670 IFGVTTLDIVR 11 0 1 Unmodified _IFGVTTLDIVR_ 0 0 0 Q0QF37;Q75MT9;Q6FHZ0;A0A024R4K3;P40926;G3XAL0;B3KTM1 Q0QF37 Q0QF37 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.3643 2 617.363713 1232.71287 77769.93 0.55292 0.00034135 -0.59039 -0.00036449 -0.037474 -2.3135E-05 617.36323136179 622.367517211435 114.19 0.60582 114.19 113.88 114.48 -7.6294E-06 96 37 4 0 0 0 0.00041003 1 74217 80.688 65.538 1 5.5169 5.5609 0 6441800 1683800 4758000 16439 156 6215 6360 25671 25671 IFHAPNASAPSSSLSTFK 18 1 0 Unmodified _IFHAPNASAPSSSLSTFK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.9906 3 621.319614 1860.93701 77229.68 0.48629 0.00030214 -0.49703 -0.00030882 -0.01074 -6.6733E-06 621.653447162197 623.990504010536 73.246 0.63248 73.246 72.961 73.594 0 164 58 5 0 0 0 1.9617E-05 2 42986 46.925 46.925 1 0.57105 0.58355 0 28293000 15875000 12418000 16440 878 6216 6361 25672;25673 25673 IFHAPNASAPSSSLSTFK 18 1 0 Unmodified _IFHAPNASAPSSSLSTFK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.3253 3 621.319614 1860.93701 76665.92 0.44652 0.00027743 -0.18095 -0.00011243 0.26557 0.000165 621.319294014893 623.990849831096 83.45 0.48314 83.45 83.241 83.724 0 159 31 8 0 0 0 0.0019431 1 45443 21.625 20.755 1 1.7024 1.3619 0 8777200 3620900 5156300 16441 878 6216 6361 25674 25674 IFHAPNASAPSSSLSTFK 18 1 0 Unmodified _IFHAPNASAPSSSLSTFK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.9911 3 621.319614 1860.93701 77859.9 0.59228 0.000368 -0.44695 -0.0002777 0.14533 9.0299E-05 621.653651324563 623.99059298455 83.417 0.45 83.417 83.164 83.614 0 138 24 8 0 0 0 0.00011124 2 44609 28.883 28.012 1 1.7748 1.4575 0 9396700 3508400 5888300 16442 878 6216 6361 25675;25676 25675 IFHELTQTDK 10 1 0 Unmodified _IFHELTQTDK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.8868 3 411.215427 1230.62445 96243.87 0.039086 1.6073E-05 0.1081 4.4454E-05 0.14719 6.0527E-05 411.215270944328 413.886946102864 34.336 0.35547 34.336 34.235 34.591 -3.8147E-06 103 28 5 0 0 0 0.0077661 1 17186 40.883 30.831 1 1.9846 2.0615 0 12490000 4525100 7965100 16443 196 6217 6362 25677 25677 IFHTVTTTDDPVIR 14 0 1 Unmodified _IFHTVTTTDDPVIR_ 0 0 0 O15371;B4E1K8;B0QYA5;B0QYA4 O15371 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.6254 3 538.954383 1613.84132 87760.71 0.36834 0.00019852 -0.10976 -5.9157E-05 0.25858 0.00013936 538.95407974092 542.290939870136 64.954 0.4042 64.954 64.745 65.149 0 89 32 4 0 0 0 0.010309 1 38300 18.988 12.259 1 1.5349 1.528 0 8005500 2872300 5133200 16444 1378 6218 6363 25678 25678 IFIGTFK 7 1 0 Unmodified _IFIGTFK_ 0 0 0 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q53HE7;Q9UIS4;Q15182;P63162;P14678;Q6LBS1;J3KRY3;S4R3P3 J3QLE5 J3QLE5 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.2458 2 413.247089 824.479626 93268.75 0.43489 0.00017972 -0.58902 -0.00024341 -0.15413 -6.3695E-05 413.246777137894 417.253784089647 80.178 1.0689 80.178 79.803 80.872 0 365 90 6 0 0 0 0.026711 1 47531 76.847 30.08 1 2.0861 2.3167 0 59734000 22097000 37636000 16445 1041 6219 6364 25679 25679 IFIGTFK 7 1 0 Unmodified _IFIGTFK_ 0 0 0 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q53HE7;Q9UIS4;Q15182;P63162;P14678;Q6LBS1;J3KRY3;S4R3P3 J3QLE5 J3QLE5 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.2542 2 413.247089 824.479626 93644.41 0.38363 0.00015853 -0.52862 -0.00021845 -0.14499 -5.9917E-05 413.246800296533 417.253796437029 78.957 1.0164 78.957 78.516 79.533 0 334 87 6 0 0 0 0.017423 2 47935 97.071 40.561 1 1.9137 2.1434 0 81947000 34064000 47882000 16446 1041 6219 6364 25680;25681 25681 IFLFDTQHFISK 12 1 0 Unmodified _IFLFDTQHFISK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.9405 3 499.269643 1494.7871 86094.54 0.37652 0.00018799 -0.013481 -6.7307E-06 0.36304 0.00018126 499.269622715525 501.940956147808 106.61 0.86606 106.61 106.3 107.16 0 379 63 8 0 0 0 5.47E-06 2 67968 84.892 84.892 1 0.94076 1.0558 0 55291000 27802000 27489000 16447 897 6220 6365 25682;25683 25683 IFLFDTQHFISK 12 1 0 Unmodified _IFLFDTQHFISK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.9409 3 499.269643 1494.7871 86676.67 0.51278 0.00025602 0.2434 0.00012152 0.75618 0.00037754 499.604071291918 501.941107983029 117.71 0.86821 117.71 117.49 118.36 0 176 36 9 0 0 0 0.0016561 1 69333 46.159 46.159 1 1.1677 0.93812 0 7832500 3770900 4061500 16448 897 6220 6365 25684 25684 IFLFDTQHFISK 12 1 0 Unmodified _IFLFDTQHFISK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.4014 2 748.400827 1494.7871 73413.88 0.94527 0.00070744 0.72648 0.0005437 1.6718 0.0012511 748.903362627874 752.408291276168 117.73 0.42752 117.73 117.53 117.96 0 54 18 5 0 0 0 0.041943 1 69426 33.961 18.988 1 1.365 1.1519 0 1951100 841420 1109700 16449 897 6220 6365 25685 25685 IFLLGLADNEAAIVQAESEETK 22 1 0 Unmodified _IFLLGLADNEAAIVQAESEETK_ 0 0 0 Q9UHB9;Q96K98;B3KMI9;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1185.1213 2 1181.11284 2360.21112 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.5 1 127.5 127 128 0 0 0 0 1.5615E-05 1 85143 67.115 53.152 1 16450 2101 6221 6366 25686 25686 IFLLTNNNLLLADQK 15 1 0 Unmodified _IFLLTNNNLLLADQK_ 0 0 0 E9PDF6;B0I1S9;O43795;H7C2Y7;B3KQI2 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.5043 2 865.495987 1728.97742 66971.88 0.90925 0.00078695 -0.10313 -8.926E-05 0.80611 0.00069769 865.495534613953 869.503247006167 120.17 0.47099 120.17 119.96 120.43 -7.6294E-06 145 33 6 0 0 0 1.28E-07 2 77340 110.08 110.08 1 1.8081 1.8391 0 13950000 4868300 9082000 16451 805 6222 6367 25687;25688 25687 IFLLTNNNLLLADQK 15 1 0 Unmodified _IFLLTNNNLLLADQK_ 0 0 0 E9PDF6;B0I1S9;O43795;H7C2Y7;B3KQI2 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.4966 2 865.495987 1728.97742 67607.17 0.78829 0.00068226 -0.091785 -7.9439E-05 0.6965 0.00060282 865.495933960636 869.503081142066 119.64 0.50253 119.64 119.42 119.92 0 167 36 6 0 0 0 3.0325E-07 2 78914 106.49 106.49 1 1.8615 1.8995 0 17173000 6379800 10793000 16452 805 6222 6367 25689;25690 25690 IFLLTNNNLLLADQK 15 1 0 Unmodified _IFLLTNNNLLLADQK_ 0 0 0 E9PDF6;B0I1S9;O43795;H7C2Y7;B3KQI2 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.5044 2 865.495987 1728.97742 65869.8 0.89657 0.00077598 0.096395 8.343E-05 0.99297 0.00085941 865.496071938966 869.503277591009 132.34 0.45107 132.34 132.16 132.61 0 75 20 5 0 0 0 0.00038257 1 80439 58.674 58.674 1 1.9683 1.5758 0 2887300 687060 2200300 16453 805 6222 6367 25691 25691 IFNITDNAAIK 11 1 0 Unmodified _IFNITDNAAIK_ 0 0 0 H0Y9G6;E7ETU7;B4DKM0;P09001;D6RC14;E9PF06;B4DW56 H0Y9G6 H0Y9G6 MRPL3 39S ribosomal protein L3, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.3383 2 610.337695 1218.66084 NaN NaN NaN 0.028831 1.7597E-05 NaN NaN NaN NaN 84.628 0.2679 84.628 84.56 84.827 0 0 0 0 0.015028 1 50746 54.608 10.213 1 NaN NaN 0 4846700 4846700 0 16454 992 6223 6368 25692 25692 IFNITDNAAIK 11 1 0 Unmodified _IFNITDNAAIK_ 0 0 0 H0Y9G6;E7ETU7;B4DKM0;P09001;D6RC14;E9PF06;B4DW56 H0Y9G6 H0Y9G6 MRPL3 39S ribosomal protein L3, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.3376 2 610.337695 1218.66084 NaN NaN NaN -1.1237 -0.00068585 NaN NaN NaN NaN 83.617 0.42427 83.617 83.354 83.778 0 0 0 0 0.005584 1 51218 64.711 18.994 1 NaN NaN 0 5530500 5530500 0 16455 992 6223 6368 25693 25693 IFNLSGGEK 9 1 0 Unmodified _IFNLSGGEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7655 2 482.758549 963.502546 NaN NaN NaN -0.15227 -7.3509E-05 NaN NaN NaN NaN 53.873 0.93256 53.873 53.582 54.515 0 0 0 0 0.0019632 1 30102 83.265 64.489 1 NaN NaN 0 210230000 0 210230000 16456 2070 6224 6369 25694 25694 IFNLSGGEK 9 1 0 Unmodified _IFNLSGGEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.7581 2 482.758549 963.502546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.727 1 53.727 53.227 54.227 3.8147E-06 0 0 0 0.003052 1 30103 76.825 9.8313 1 16457 2070 6224 6369 25695 25695 IFNLSGGEK 9 1 0 Unmodified _IFNLSGGEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.7586 2 482.758549 963.502546 87701.48 0.4228 0.00020411 -0.032247 -1.5567E-05 0.39055 0.00018854 482.758614984174 486.765523912794 52.448 1.3123 52.448 52.031 53.343 0 441 106 8 0 0 0 0.0020972 2 29824 76.827 41.757 1 0.87652 1.0288 0 341030000 176520000 164510000 16458 2070 6224 6369 25696;25697 25697 IFNLSGGEK 9 1 0 Unmodified _IFNLSGGEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.7659 2 482.758549 963.502546 87612.62 0.1264 6.1022E-05 0.020099 9.7028E-06 0.1465 7.0725E-05 482.758557759695 486.765549995634 61.65 1.2305 61.65 61.262 62.493 0 431 100 7 0 0 0 0.0059982 2 31577 65.305 50.154 1 1.7397 1.4613 0 53308000 18712000 34596000 16459 2070 6224 6369 25698;25699 25699 IFNLSGGEK 9 1 0 Unmodified _IFNLSGGEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.7653 2 482.758549 963.502546 86537.59 0.14109 6.8114E-05 0.077873 3.7594E-05 0.21897 0.00010571 482.758532241233 486.765522794812 61.978 1.184 61.978 61.656 62.84 3.8147E-06 518 85 10 0 0 0 0.0035543 2 31034 71.501 52.407 1 1.7304 1.4521 0 48452000 15905000 32547000 16460 2070 6224 6369 25700;25701 25700 IFQIHTSR 8 0 1 Unmodified _IFQIHTSR_ 0 0 0 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 337.8585 3 334.522414 1000.54541 107217.8 -0.064715 -2.1649E-05 0.7995 0.00026745 0.73478 0.0002458 334.522675009293 337.858737513631 34.026 0.35939 34.026 33.869 34.228 0 51 27 4 0 0 0 0.0043807 1 17141 57.96 43.753 1 1.9973 1.9866 0 8281300 2955300 5326000 16461 1634 6225 6370 25702 25702 IFQPVIEAPGASK 13 1 0 Unmodified _IFQPVIEAPGASK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.3923 2 678.879727 1355.7449 NaN NaN NaN 0.48583 0.00032982 NaN NaN NaN NaN 84.052 0.49211 84.052 83.79 84.282 0 0 0 0 0.0049438 1 50211 59.542 31.529 1 NaN NaN 0 11376000 0 11376000 16462 2002 6226 6371 25703 25703 IFQPVIEAPGASK 13 1 0 Unmodified _IFQPVIEAPGASK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.8869 2 678.879727 1355.7449 NaN NaN NaN 0.88272 0.00059926 NaN NaN NaN NaN 82.953 0.53001 82.953 82.723 83.253 0 0 0 0 0.0041168 1 50791 62.633 38.478 1 NaN NaN 0 9486400 0 9486400 16463 2002 6226 6371 25704 25704 IFQPVIEAPGASK 13 1 0 Unmodified _IFQPVIEAPGASK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.8872 2 678.879727 1355.7449 NaN NaN NaN 0.35244 0.00023926 NaN NaN NaN NaN 95.869 0.69212 95.869 95.553 96.245 0 0 0 0 0.049584 1 53640 40.154 40.154 1 NaN NaN 0 5302900 0 5302900 16464 2002 6226 6371 25705 25705 IFQPVIEAPGASK 13 1 0 Unmodified _IFQPVIEAPGASK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.8868 2 678.879727 1355.7449 71547.02 0.48969 0.00033244 0.19308 0.00013108 0.68278 0.00046352 678.878788086011 682.88732146324 95.719 0.84392 95.719 95.427 96.271 -7.6294E-06 212 55 5 0 0 0 0.0045885 2 52736 48.284 35.668 1 1.407 1.1453 0 6905500 2711400 4194100 16465 2002 6226 6371 25706;25707 25706 IFSGSSHQDLSQK 13 1 0 Unmodified _IFSGSSHQDLSQK_ 0 0 0 Q53FW2;P60891;B1ALA7 Q53FW2 Q53FW2 PRPS1 Ribose-phosphate pyrophosphokinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.3557 2 717.354605 1432.69466 72407.37 0.80108 0.00057466 -0.021475 -1.5405E-05 0.7796 0.00055925 717.354598899634 721.361663308445 23.996 0.4033 23.996 23.813 24.216 0 50 19 5 0 0 0 4.8231E-24 2 9752 160.52 133.73 1 2.9285 2.9716 0 18151000 4679300 13471000 16466 1626 6227 6372 25708;25709 25708 IFSGSSHQDLSQK 13 1 0 Unmodified _IFSGSSHQDLSQK_ 0 0 0 Q53FW2;P60891;B1ALA7 Q53FW2 Q53FW2 PRPS1 Ribose-phosphate pyrophosphokinase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.3602 2 717.354605 1432.69466 NaN NaN NaN 0.27625 0.00019817 NaN NaN NaN NaN 23.608 0.31789 23.608 23.383 23.701 1.9073E-06 0 0 0 1.0576E-38 1 9403 167.84 134.85 1 NaN NaN 0 18680000 0 18680000 16467 1626 6227 6372 25710 25710 IFSGVFVK 8 1 0 Unmodified _IFSGVFVK_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.7659 2 448.765646 895.516739 91208.72 0.16434 7.3751E-05 -0.30689 -0.00013772 -0.14255 -6.3973E-05 448.765422098091 452.772402008963 80.18 0.87363 80.18 79.918 80.792 -7.6294E-06 264 69 6 0 0 0 0.01271 3 48731 66.993 19.594 1 0.90299 1.0147 0 55949000 28173000 27776000 16468 378 6228 6373 25711;25712;25713 25713 IFSQRPFDK 9 1 1 Unmodified _IFSQRPFDK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.8732 3 379.873224 1136.59784 97033.59 0.16547 6.2859E-05 -0.016767 -6.3693E-06 0.14871 5.649E-05 379.873083005202 385.880672628724 38.492 0.54738 38.492 38.335 38.882 0 196 44 7 0 0 0 0.0093287 2 19853 50.473 50.473 1 1.0617 1.2692 0 53959000 25100000 28860000 16469 836;1683 6229 6374 25714;25715 25715 IFSQRPFDK 9 1 1 Unmodified _IFSQRPFDK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 385.8802 3 379.873224 1136.59784 96979.87 0.34249 0.0001301 -0.073107 -2.7771E-05 0.26938 0.00010233 379.873072925932 385.88062082168 37.152 0.49247 37.152 36.9 37.392 0 209 41 7 0 0 0 0.0082963 2 19138 52.49 52.49 1 1.1333 1.3222 0 46127000 22589000 23538000 16470 836;1683 6229 6374 25716;25717 25716 IFTFAEK 7 1 0 Unmodified _IFTFAEK_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.2427 2 428.234179 854.453805 NaN NaN NaN 0.36271 0.00015533 NaN NaN NaN NaN 64.191 0.59709 64.191 64.003 64.6 0 0 0 0 0.045068 1 36841 60.76 31.422 1 NaN NaN 0 8860600 0 8860600 16471 567 6230 6375 25718 25718 IFTGSDDCLVK 11 1 0 Unmodified _IFTGSDDCLVK_ 0 0 0 Q9NSI6;Q8WWQ0;Q6RI45 Q9NSI6;Q8WWQ0;Q6RI45 Q8WWQ0 BRWD1;PHIP;BRWD3 Bromodomain and WD repeat-containing protein 1;PH-interacting protein;Bromodomain and WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.8048 2 627.805371 1253.59619 75782 0.47307 0.00029699 -0.23136 -0.00014525 0.24171 0.00015175 627.805317755412 631.812352405879 65.707 0.91493 65.707 65.16 66.075 0 368 77 7 0 0 0 0.00043239 3 38583 78.934 63.674 1 0.71338 0.80446 0 67050000 38481000 28569000 16472 1942;2068;1860 6231 6376 25719;25720;25721 25720 IFTGSDDCLVK 11 1 0 Unmodified _IFTGSDDCLVK_ 0 0 0 Q9NSI6;Q8WWQ0;Q6RI45 Q9NSI6;Q8WWQ0;Q6RI45 Q8WWQ0 BRWD1;PHIP;BRWD3 Bromodomain and WD repeat-containing protein 1;PH-interacting protein;Bromodomain and WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.8126 2 627.805371 1253.59619 76571.01 0.47882 0.00030061 -0.30163 -0.00018936 0.17719 0.00011124 627.80492454708 631.812212359559 76.342 1.0833 76.342 75.888 76.972 0 322 74 7 0 0 0 0.00040176 1 40681 81.338 60.436 1 1.4343 1.1225 0 11712000 4767300 6944700 16473 1942;2068;1860 6231 6376 25722 25722 IFTGSDDCLVK 11 1 0 Unmodified _IFTGSDDCLVK_ 0 0 0 Q9NSI6;Q8WWQ0;Q6RI45 Q9NSI6;Q8WWQ0;Q6RI45 Q8WWQ0 BRWD1;PHIP;BRWD3 Bromodomain and WD repeat-containing protein 1;PH-interacting protein;Bromodomain and WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.8055 2 627.805371 1253.59619 74800.85 0.49473 0.00031059 -0.16166 -0.00010149 0.33307 0.0002091 627.804930893482 631.812151276741 76.674 1.0499 76.674 76.309 77.359 0 294 71 6 0 0 0 0.0061204 2 40143 54.982 42.756 1 1.3268 1.0951 0 11275000 4858100 6417300 16474 1942;2068;1860 6231 6376 25723;25724 25724 IFTPIVEHLGLQIR 14 0 1 Unmodified _IFTPIVEHLGLQIR_ 0 0 0 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.6611 3 545.99088 1634.95081 81606.91 0.75134 0.00041022 -0.13372 -7.3012E-05 0.61761 0.00033721 546.325155810545 549.326850818288 112.42 0.70429 112.42 112.13 112.84 0 256 51 7 0 0 0 7.5503E-05 2 70827 62.891 62.891 1 0.99403 1.0209 0 25571000 12230000 13341000 16475 858 6232 6377 25725;25726 25725 IFTPIVEHLGLQIR 14 0 1 Unmodified _IFTPIVEHLGLQIR_ 0 0 0 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.9913 3 545.99088 1634.95081 80696.17 0.69973 0.00038205 -0.10942 -5.9742E-05 0.59032 0.00032231 545.99086006712 549.326941271 111.48 0.65517 111.48 111.22 111.87 0 232 43 7 0 0 0 0.00077427 1 71873 48.704 48.704 1 1.0251 1.0779 0 23091000 10805000 12285000 16476 858 6232 6377 25727 25727 IFTPIVEHLGLQIR 14 0 1 Unmodified _IFTPIVEHLGLQIR_ 0 0 0 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.9913 3 545.99088 1634.95081 81409.92 0.85381 0.00046617 0.11012 6.0122E-05 0.96392 0.00052629 545.990794400575 549.327065880128 122.61 0.65515 122.61 122.43 123.08 0 136 32 8 0 0 0 0.011015 1 73125 29.491 29.491 1 1.2307 1.0154 0 18743000 7913700 10829000 16477 858 6232 6377 25728 25728 IFTPIVEHLGLQIR 14 0 1 Unmodified _IFTPIVEHLGLQIR_ 0 0 0 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.326 3 545.99088 1634.95081 81359.39 0.8482 0.00046311 0.072251 3.9448E-05 0.92045 0.00050256 545.990778042054 549.326944330243 122.36 0.53998 122.36 122.22 122.76 0 105 25 7 0 0 0 0.0022596 1 71989 40.552 40.552 1 1.1859 0.96326 0 12198000 4700600 7497300 16478 858 6232 6377 25729 25729 IFTQLEEFR 9 0 1 Unmodified _IFTQLEEFR_ 0 0 0 B0AZM4;A8K6F0;A0A024R9L1;O60306 B0AZM4 B0AZM4 AQR Intron-binding protein aquarius ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.3138 2 591.811313 1181.60807 NaN NaN NaN -0.16841 -9.9668E-05 NaN NaN NaN NaN 91.428 0.3617 91.428 91.154 91.516 0 0 0 0 0.00049582 1 55284 91.318 58.963 1 NaN NaN 0 5356900 5356900 0 16479 282 6233 6378 25730 25730 IFTSIGEDYDER 12 0 1 Unmodified _IFTSIGEDYDER_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.8376 2 722.833171 1443.65179 71040.76 0.74193 0.00053629 -0.10907 -7.8841E-05 0.63286 0.00045745 722.83300551951 727.837256573934 73.794 1.3267 73.794 73.313 74.64 7.6294E-06 658 117 8 0 0 0 1.1836E-22 6 43496 155.15 155.15 1 1.4393 1.6565 0 146570000 62258000 84311000 16480 730 6234 6379 25731;25732;25733;25734;25735;25736 25733 IFTSIGEDYDER 12 0 1 Unmodified _IFTSIGEDYDER_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.335 2 722.833171 1443.65179 71198.66 0.69495 0.00050234 -0.066612 -4.8149E-05 0.62834 0.00045419 722.832985780204 727.837291225643 72.717 1.4196 72.717 72.268 73.687 0 634 123 8 0 0 0 9.881E-23 4 43473 156.48 156.48 1 1.4338 1.6497 0 208820000 82237000 126580000 16481 730 6234 6379 25737;25738;25739;25740 25738 IFTSIGEDYDER 12 0 1 Unmodified _IFTSIGEDYDER_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.8381 2 722.833171 1443.65179 71016.8 0.64059 0.00046304 -0.013132 -9.492E-06 0.62745 0.00045355 722.833052015479 727.837265470553 84.192 1.1256 84.192 83.835 84.96 0 425 89 7 0 0 0 9.6174E-05 3 45796 96.015 85.185 1 2.7348 2.2761 0 22030000 6512300 15517000 16482 730 6234 6379 25741;25742;25743 25741 IFTSIGEDYDER 12 0 1 Unmodified _IFTSIGEDYDER_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.3399 2 722.833171 1443.65179 69690.48 0.66654 0.0004818 1.3691 0.0009896 2.0356 0.0014714 722.8326016535 729.343863446638 85.025 0.50533 85.025 84.749 85.255 0 109 35 6 0 0 0 0.053847 1 46444 32.008 30.509 1 4.1926 3.6813 0 1776800 531510 1245300 16483 730 6234 6379 25744 25744 IFTSIGEDYDER 12 0 1 Unmodified _IFTSIGEDYDER_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.837 2 722.833171 1443.65179 70947.41 0.79107 0.00057181 -0.045114 -3.261E-05 0.74596 0.0005392 722.832985993944 727.837237030051 84.406 1.9791 84.406 83.989 85.968 0 495 138 7 0 0 0 0.00044103 3 45064 70.942 63.016 1 2.7078 2.334 0 22332000 6788700 15543000 16484 730 6234 6379 25745;25746;25747 25745 IFTSLEPEHDLNDVCLYPNSGMLLTANETPK 31 1 0 Unmodified _IFTSLEPEHDLNDVCLYPNSGMLLTANETPK_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1176.571 3 1173.56545 3517.67452 54779.06 0.086482 0.00010149 0.013353 1.567E-05 0.099835 0.00011716 1174.2345805854 1176.90563637558 131.6 0.38924 131.6 131.46 131.85 0 138 18 11 0 0 0 0.050811 1 79895 8.6138 8.6138 1 1.5816 1.2532 0 6336200 2383300 3952900 16485 2000 6235 6380 25748 25748 IFTSLEPEHDLNDVCLYPNSGMLLTANETPK 31 1 0 Unmodified _IFTSLEPEHDLNDVCLYPNSGMLLTANETPK_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1176.5719 3 1173.56545 3517.67452 55271.6 0.49876 0.00058533 -0.16272 -0.00019096 0.33604 0.00039436 1174.23355714699 1176.57164954377 131.45 0.40747 131.45 131.28 131.69 0 77 15 9 0 0 0 0.0059207 1 78902 22.008 22.008 1 1.8545 1.5287 0 10842000 3149400 7692700 16486 2000 6235 6380 25749 25749 IFVGGLSPDTPEEK 14 1 0 Unmodified _IFVGGLSPDTPEEK_ 0 0 0 D6RF44;H0YA96;D6RAF8;H0Y8G5;Q12771;B4DTC3;A0A024RDF4;A0A024RDB4;A0A024RDF3;Q14103;B4E0W4 D6RF44 D6RF44 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.8903 2 744.882664 1487.75077 70797.65 0.34248 0.00025511 0.2323 0.00017304 0.57479 0.00042815 745.384189552899 748.890218988153 81.374 0.46471 81.374 81.157 81.622 -7.6294E-06 125 40 5 0 0 0 0.00035359 1 48612 61.435 61.435 1 1.8007 1.8113 0 18545000 6484100 12061000 16487 383 6236 6381 25750 25750 IFVGGLSPDTPEEK 14 1 0 Unmodified _IFVGGLSPDTPEEK_ 0 0 0 D6RF44;H0YA96;D6RAF8;H0Y8G5;Q12771;B4DTC3;A0A024RDF4;A0A024RDB4;A0A024RDF3;Q14103;B4E0W4 D6RF44 D6RF44 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.3856 2 744.882664 1487.75077 70348.13 0.61112 0.00045521 -0.62333 -0.00046431 -0.012211 -9.0958E-06 744.881526587799 748.890005613207 80.36 0.53655 80.36 80.118 80.654 7.6294E-06 135 43 5 0 0 0 0.035044 1 49051 58.676 58.676 1 2.024 2.0203 0 14634000 4391800 10242000 16488 383 6236 6381 25751 25751 IFVGGLSPDTPEEK 14 1 0 Unmodified _IFVGGLSPDTPEEK_ 0 0 0 D6RF44;H0YA96;D6RAF8;H0Y8G5;Q12771;B4DTC3;A0A024RDF4;A0A024RDB4;A0A024RDF3;Q14103;B4E0W4 D6RF44 D6RF44 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.8915 2 744.882664 1487.75077 70703.05 0.77142 0.00057462 0.61175 0.00045568 1.3832 0.0010303 744.883444177873 748.890301596833 92.918 0.37238 92.918 92.714 93.087 7.6294E-06 83 24 5 0 0 0 0.0044521 1 51898 45.433 45.433 1 1.0389 0.8512 0 2519900 1339900 1180000 16489 383 6236 6381 25752 25752 IFVGGLSPDTPEEK 14 1 0 Unmodified _IFVGGLSPDTPEEK_ 0 0 0 D6RF44;H0YA96;D6RAF8;H0Y8G5;Q12771;B4DTC3;A0A024RDF4;A0A024RDB4;A0A024RDF3;Q14103;B4E0W4 D6RF44 D6RF44 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.8911 2 744.882664 1487.75077 71367.69 0.36404 0.00027117 1.0787 0.00080348 1.4427 0.0010746 744.883368555825 748.890397011446 92.777 0.60196 92.777 92.567 93.169 0 113 37 5 0 0 0 0.0083346 1 50930 38.875 32.581 1 0.85004 0.67955 0 2426500 991320 1435200 16490 383 6236 6381 25753 25753 IFVGNVSAACTSQELR 16 0 1 Unmodified _IFVGNVSAACTSQELR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567;A0A0A6YYI9;A0A0S2Z5V2;F8WDX3;A0A0A0MSL8;B8ZZ74 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14;RBM14-RBM4 RNA-binding protein 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 876.4464 2 876.440886 1750.86722 NaN NaN NaN 1.5402 0.0013499 NaN NaN NaN NaN 79.677 0.76729 79.677 79.161 79.928 0 0 0 0 0.011129 1 48280 46.88 33.217 1 NaN NaN 0 20942000 20942000 0 16491 571 6237 6382 25754 25754 IFVGNVSAACTSQELR 16 0 1 Unmodified _IFVGNVSAACTSQELR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567;A0A0A6YYI9;A0A0S2Z5V2;F8WDX3;A0A0A0MSL8;B8ZZ74 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14;RBM14-RBM4 RNA-binding protein 14 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 876.4434 2 876.440886 1750.86722 NaN NaN NaN 0.67485 0.00059147 NaN NaN NaN NaN 92.606 0.58357 92.606 92.371 92.955 -7.6294E-06 0 0 0 0.0015643 1 51568 63.181 53.493 1 NaN NaN 0 3815000 3815000 0 16492 571 6237 6382 25755 25755 IFVGNVSAACTSQELR 16 0 1 Unmodified _IFVGNVSAACTSQELR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567;A0A0A6YYI9;A0A0S2Z5V2;F8WDX3;A0A0A0MSL8;B8ZZ74 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14;RBM14-RBM4 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 876.4407 2 876.440886 1750.86722 64809.21 0.038775 3.3984E-05 0.49188 0.00043111 0.53066 0.00046509 876.441476334685 881.444386571584 92.508 0.65486 92.508 92.13 92.785 7.6294E-06 196 34 9 0 0 0 0.0021592 1 50623 42.095 42.095 1 0.72531 0.60179 0 5759300 3142000 2617400 16493 571 6237 6382 25756 25756 IFVNSNTDVAPFLR 14 0 1 Unmodified _IFVNSNTDVAPFLR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.4274 2 796.925197 1591.83584 68002.98 0.94826 0.00075569 0.17758 0.00014152 1.1258 0.00089721 796.925409841816 801.929496690685 109.18 0.87457 109.18 108.88 109.76 0 305 62 8 0 0 0 2.4368E-14 2 68159 161.17 161.17 1 0.83072 0.93681 0 99314000 59358000 39956000 16494 899;1099 6238 6383 25757;25758 25757 IFVNSNTDVAPFLR 14 0 1 Unmodified _IFVNSNTDVAPFLR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.9263 2 796.925197 1591.83584 68788.75 0.7536 0.00060057 0.4636 0.00036945 1.2172 0.00097002 796.925597945626 801.929873564141 108.62 0.78778 108.62 108.32 109.1 0 299 55 8 0 0 0 2.9786E-14 1 69437 152.64 152.64 1 0.74846 0.85535 0 89602000 50328000 39274000 16495 899;1099 6238 6383 25759 25759 IFVNSNTDVAPFLR 14 0 1 Unmodified _IFVNSNTDVAPFLR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 796.9263 2 796.925197 1591.83584 NaN NaN NaN 0.4421 0.00035232 NaN NaN NaN NaN 120.19 1.0656 120.19 119.92 120.98 7.6294E-06 0 0 0 4.9891E-22 1 71233 132.25 110.79 1 NaN NaN 0 17468000 17468000 0 16496 899;1099 6238 6383 25760 25760 IFVNSNTDVAPFLR 14 0 1 Unmodified _IFVNSNTDVAPFLR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 796.9265 2 796.925197 1591.83584 NaN NaN NaN 0.26679 0.00021261 NaN NaN NaN NaN 119.97 0.77827 119.97 119.68 120.45 0 0 0 0 3.4441E-15 1 70165 125.74 104.28 1 NaN NaN 0 13731000 13731000 0 16497 899;1099 6238 6383 25761 25761 IFYHPETTQLMILSASEATVK 21 1 0 Oxidation (M) _IFYHPETTQLM(ox)ILSASEATVK_ IFYHPETTQLM(1)ILSASEATVK IFYHPETTQLM(67.87)ILSASEATVK 0 1 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21;C9IZ22;C9JZE0;C9JY20 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.0853 3 799.078643 2394.2141 69501.42 1.202 0.00096048 -0.43407 -0.00034685 0.76791 0.00061362 799.746824962109 802.08429649467 102.62 0.70728 102.62 102.28 102.99 0 155 55 6 0 0 0 2.5327E-08 1 64753 67.866 67.866 1 1.5494 1.5932 0 17943000 7092500 10850000 16498 531 6239 6384 25762 25762 391 IFYQFLYNNNTR 12 0 1 Unmodified _IFYQFLYNNNTR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.9008 2 796.89644 1591.77833 66794.08 1.0929 0.00087089 0.52305 0.00041682 1.6159 0.0012877 796.896672713332 801.900751022815 100.31 0.9078 100.31 99.91 100.82 0 323 73 7 0 0 0 8.1241E-05 4 61424 96.89 96.89 1 1.1608 1.1652 0 17186000 6822900 10363000 16499 1336 6240 6385 25763;25764;25765;25766 25764 IFYQFLYNNNTR 12 0 1 Unmodified _IFYQFLYNNNTR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 801.9007 2 796.89644 1591.77833 NaN NaN NaN 0.73505 0.00058576 NaN NaN NaN NaN 112.54 1.1213 112.54 112.03 113.15 -7.6294E-06 0 0 0 0.0019686 1 65302 72.006 54.57 1 NaN NaN 0 5923500 0 5923500 16500 1336 6240 6385 25767 25767 IFYVDTLK 8 1 0 Unmodified _IFYVDTLK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.7818 2 499.781493 997.548434 86611.38 0.52666 0.00026322 0.26982 0.00013485 0.79648 0.00039807 499.781478249913 503.788629967164 84.987 0.91123 84.987 84.736 85.647 7.6294E-06 342 74 7 0 0 0 0.0092533 2 51009 75.109 33.607 1 0.92628 1.0453 0 134470000 66290000 68176000 16501 1827 6241 6386 25768;25769 25768 IFYVDTLK 8 1 0 Unmodified _IFYVDTLK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.7884 2 499.781493 997.548434 86082.25 0.58679 0.00029327 0.72316 0.00036142 1.3099 0.00065469 499.781722575366 503.788843481712 83.921 0.73083 83.921 83.669 84.4 0 290 60 7 0 0 0 0.0075577 2 51523 92.491 43.433 1 0.93189 1.0777 0 201200000 106900000 94299000 16502 1827 6241 6386 25770;25771 25771 IFYVDTLK 8 1 0 Unmodified _IFYVDTLK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 503.7887 2 499.781493 997.548434 85893.34 0.0086737 4.335E-06 0.64891 0.00032431 0.65758 0.00032865 499.781797890327 503.788795717882 96.795 1.0637 96.795 96.48 97.543 0 253 51 8 0 0 0 0.051822 1 53620 48.561 16.091 1 1.1779 0.96706 0 9286800 4323300 4963500 16503 1827 6241 6386 25772 25772 IGAEVYHHLK 10 1 0 Unmodified _IGAEVYHHLK_ 0 0 0 K7EPM1;K7EKN2;B4DUJ6;E5RGZ4;D3DTL4;P13929 K7EPM1 K7EPM1 ENO3 Enolase;Beta-enolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.8196 2 583.819473 1165.62439 81155.53 0.40942 0.00023903 0.75881 0.00044301 1.1682 0.00068203 583.819467995666 587.826342579345 51.756 0.63485 51.756 51.543 52.178 -3.8147E-06 226 51 8 0 0 0 0.0063469 1 29388 58.917 17.265 1 0.39802 0.4421 0 49794000 36086000 13708000 16504 1039 6242 6387 25773 25773 IGAWHPAR 8 0 1 Unmodified _IGAWHPAR_ 0 0 0 B3KS36 B3KS36 B3KS36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 303.1681 3 303.168083 906.48242 108600.9 0.13668 4.1438E-05 -0.13963 -4.2331E-05 -0.0029452 -8.9289E-07 303.167937548564 306.504120131554 24.923 0.2456 24.923 24.792 25.038 0 36 9 6 0 0 0 0.011701 2 10601 40.098 31.829 1 0.90896 0.95307 0 22840000 11640000 11199000 16505 936 6243 6388 25774;25775 25775 IGCFFLHPR 9 0 1 Unmodified _IGCFFLHPR_ 0 0 0 Q4KMR5;E9PH99;Q9Y4E5;Q96JY2 Q4KMR5 Q4KMR5 ZNF451 Zinc finger protein 451 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 382.8671 3 382.867416 1145.58042 NaN NaN NaN -0.36122 -0.0001383 NaN NaN NaN NaN 71.608 0.15363 71.608 71.509 71.662 0 0 0 0 0.038627 1 41838 34.387 21.431 1 NaN NaN 0 2597300 2597300 0 16506 1236 6244 6389 25776 25776 IGDFGLATK 9 1 0 Unmodified _IGDFGLATK_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;Q58A51 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.2623 2 461.255643 920.496732 90034.33 0.10008 4.6162E-05 0.628 0.00028967 0.72807 0.00033583 461.25553609666 465.262863170993 64.479 1.0317 64.479 63.957 64.989 0 307 90 5 0 0 0 0.0056063 1 37095 66.299 39.337 1 1.1169 1.2018 0 40390000 20214000 20176000 16507 1604 6245 6390 25777 25777 IGDFGLATK 9 1 0 Unmodified _IGDFGLATK_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;Q58A51 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2627 2 461.255643 920.496732 90720.96 0.2396 0.00011052 0.76795 0.00035422 1.0076 0.00046474 461.255588681886 465.262497805784 63.276 1.0453 63.276 62.847 63.892 3.8147E-06 310 89 4 0 0 0 0.0019956 1 37086 78.149 41.964 1 1.1407 1.1497 0 27002000 12420000 14583000 16508 1604 6245 6390 25778 25778 IGDFGLVTSLK 11 1 0 Unmodified _IGDFGLVTSLK_ 0 0 0 Q8IW76;B7ZKK7;P19525 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.3371 2 575.329339 1148.64412 82109.58 0.69725 0.00040115 0.19541 0.00011243 0.89267 0.00051358 575.329217257761 579.336536829593 103.51 0.68184 103.51 103.11 103.8 0 215 54 5 0 0 0 0.00034287 2 63659 85.958 70.077 1 1.4146 1.5296 0 35631000 14879000 20753000 16509 1111 6246 6391 25779;25780 25779 IGDFGLVTSLK 11 1 0 Unmodified _IGDFGLVTSLK_ 0 0 0 Q8IW76;B7ZKK7;P19525 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3364 2 575.329339 1148.64412 80669.4 0.96441 0.00055485 0.35394 0.00020363 1.3184 0.00075849 575.329230550044 579.336465016779 102.72 0.58943 102.72 102.4 102.99 -7.6294E-06 225 46 7 0 0 0 0.00015638 3 64721 94.692 75.178 1 1.5434 1.7332 0 55636000 23841000 31795000 16510 1111 6246 6391 25781;25782;25783 25781 IGDFGLVTSLK 11 1 0 Unmodified _IGDFGLVTSLK_ 0 0 0 Q8IW76;B7ZKK7;P19525 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.3367 2 575.329339 1148.64412 82260.56 0.57471 0.00033065 0.48527 0.00027919 1.06 0.00060983 575.329498199861 579.336555023847 115.23 0.50647 115.23 114.99 115.5 7.6294E-06 87 24 6 0 0 0 0.0053317 2 66493 56.404 44.357 1 1.0236 0.79761 0 3601100 1899100 1702000 16511 1111 6246 6391 25784;25785 25784 IGDFIDVSEGPLIPR 15 0 1 Unmodified _IGDFIDVSEGPLIPR_ 0 0 0 C9JG87;Q9NYK5 C9JG87 C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.4433 2 814.438138 1626.86172 NaN NaN NaN -0.83653 -0.0006813 NaN NaN NaN NaN 118.3 0.41858 118.3 118.12 118.54 7.6294E-06 0 0 0 6.4943E-07 1 75862 97.911 73.058 1 NaN NaN 0 7729800 0 7729800 16512 1134 6247 6392 25786 25786 IGDFIDVSEGPLIPR 15 0 1 Unmodified _IGDFIDVSEGPLIPR_ 0 0 0 C9JG87;Q9NYK5 C9JG87 C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.4417 2 814.438138 1626.86172 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.07 1 130.07 129.57 130.57 0 0 0 0 0.0058896 1 78787 52.344 36.772 1 16513 1134 6247 6392 25787 25787 IGDLQAFQGHGAGNLAGLK 19 1 0 Unmodified _IGDLQAFQGHGAGNLAGLK_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;A0A024R599;H0YFS2 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.671 3 622.998875 1865.97479 75955.39 0.76406 0.00047601 0.26895 0.00016755 1.033 0.00064356 622.99896884218 625.670422297825 97.329 0.37148 97.329 97.141 97.512 0 98 17 8 0 0 0 0.012267 1 54748 22.01 13.079 1 1.7583 1.3827 0 3124700 987650 2137000 16514 1072 6248 6393 25788 25788 IGDLQAFQGHGAGNLAGLK 19 1 0 Unmodified _IGDLQAFQGHGAGNLAGLK_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;A0A024R599;H0YFS2 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.0057 3 622.998875 1865.97479 77009.39 0.3588 0.00022353 0.20413 0.00012718 0.56294 0.00035071 623.332322423495 625.670086645056 97.145 0.50465 97.145 96.863 97.368 0 102 24 7 0 0 0 0.0014244 3 53809 32.366 16.8 1 1.8284 1.4364 0 3294600 1136300 2158300 16515 1072 6248 6393 25789;25790;25791 25790 IGDLTGYCTNPNR 13 0 1 Unmodified _IGDLTGYCTNPNR_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.3499 2 740.84609 1479.67763 70828.34 0.35191 0.00026071 0.9073 0.00067217 1.2592 0.00093288 741.348349782637 745.850910726292 52.886 0.35196 52.886 52.707 53.059 0 61 25 4 0 0 0 0.0020343 2 29442 55.401 49.096 1 0.8486 0.89066 0 11951000 6837300 5114000 16516 291 6249 6394 25792;25793 25792 IGDLTGYCTNPNR 13 0 1 Unmodified _IGDLTGYCTNPNR_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 745.8496 2 740.84609 1479.67763 74359.04 0.64768 0.00047983 0.12399 9.1855E-05 0.77167 0.00057169 740.846097096732 745.850098984304 61.404 0.36119 61.404 61.205 61.566 -3.8147E-06 96 29 5 0 0 0 0.036154 1 31464 32.254 32.254 1 0.7232 0.63493 0 1767100 1024100 743000 16517 291 6249 6394 25794 25794 IGDTSVSYK 9 1 0 Unmodified _IGDTSVSYK_ 0 0 0 P20700;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.2557 2 485.248015 968.481476 86164.74 0.075301 3.654E-05 -0.21224 -0.00010299 -0.13694 -6.6451E-05 485.248128736483 489.255115101588 28.992 0.36435 28.992 28.742 29.106 0 100 18 9 0 0 0 0.0010227 2 13879 91.069 68.577 1 1.1376 1.3182 0 237280000 103270000 134010000 16518 1502 6250 6395 25795;25796 25795 IGDTSVSYK 9 1 0 Unmodified _IGDTSVSYK_ 0 0 0 P20700;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.2553 2 485.248015 968.481476 87009.91 0.32465 0.00015754 0.1105 5.362E-05 0.43515 0.00021116 485.248286865636 489.255234206918 28.2 0.43946 28.2 27.871 28.31 -1.9073E-06 49 22 6 0 0 0 0.0067422 1 13418 63.419 45.433 1 1.1199 1.2756 0 149280000 71255000 78022000 16519 1502 6250 6395 25797 25797 IGDTSVSYK 9 1 0 Unmodified _IGDTSVSYK_ 0 0 0 P20700;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.255 2 485.248015 968.481476 89217.18 -0.048655 -2.361E-05 0.74246 0.00036028 0.6938 0.00033667 485.248222180523 489.255605956627 32.884 0.2701 32.884 32.764 33.034 0 48 13 5 0 0 0 0.0030108 1 14304 72.879 61.368 1 1.2054 0.95667 0 18953000 8799000 10154000 16520 1502 6250 6395 25798 25798 IGDVVGSSGANQQTSGK 17 1 0 Unmodified _IGDVVGSSGANQQTSGK_ 0 0 0 Q9Y263;E5RIM3;H0YBW4 Q9Y263 Q9Y263 PLAA Phospholipase A-2-activating protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.9041 2 802.897365 1603.78018 NaN NaN NaN 0.30049 0.00024126 NaN NaN NaN NaN 26.838 0.22537 26.838 26.701 26.926 1.9073E-06 0 0 0 1.0776E-18 1 12200 120.84 102.97 1 NaN NaN 0 6781600 0 6781600 16521 2123 6251 6396 25799 25799 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSAEDAEDGPPELLFIHGGHTAK_ 0 0 0 Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JNZ6 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.8427 4 712.591247 2846.33588 70851.82 0.7384 0.00052618 -0.030477 -2.1717E-05 0.70792 0.00050446 712.841949085785 715.347843330003 88.262 1.4472 88.262 87.496 88.943 -7.6294E-06 854 122 11 0 0 0 1.3887E-15 1 53044 70.983 66.457 1 0.97899 1.1128 0 165000000 71114000 93889000 16522 1771 6252 6397 25800 25800 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSAEDAEDGPPELLFIHGGHTAK_ 0 0 0 Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JNZ6 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.8416 4 712.591247 2846.33588 70847.51 0.48605 0.00034636 0.18389 0.00013104 0.66995 0.0004774 712.842197595811 714.845248230877 86.512 1.2255 86.512 86.031 87.256 7.6294E-06 727 107 11 0 0 0 1.0444E-18 2 53211 82.65 82.65 1 0.94652 1.0808 0 155430000 74989000 80443000 16523 1771 6252 6397 25801;25802 25801 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSAEDAEDGPPELLFIHGGHTAK_ 0 0 0 Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JNZ6 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 950.1203 3 949.785904 2846.33588 62781.86 0.49584 0.00047094 -0.31585 -0.00029999 0.17999 0.00017095 950.45418925231 952.791327934735 99.555 0.5081 99.555 99.292 99.8 -7.6294E-06 212 30 10 0 0 0 0.0030603 2 56278 23.585 22.745 1 1.5188 1.1905 0 11520000 4173800 7346100 16524 1771 6252 6397 25803;25804 25804 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSAEDAEDGPPELLFIHGGHTAK_ 0 0 0 Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JNZ6 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 952.7925 3 949.785904 2846.33588 61719.04 0.42015 0.00039905 -0.29085 -0.00027624 0.1293 0.00012281 950.119972543144 952.791497764173 99.264 0.54066 99.264 98.987 99.528 0 231 33 9 0 0 0 0.0091823 1 55172 21.699 21.024 1 1.5468 1.2759 0 12029000 4029900 7999200 16525 1771 6252 6397 25805 25805 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSAEDAEDGPPELLFIHGGHTAK_ 0 0 0 Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JNZ6 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.8457 4 712.591247 2846.33588 70543.08 0.58523 0.00041703 0.33326 0.00023748 0.91849 0.00065451 712.842162364245 714.845490781319 99.26 1.3756 99.26 98.64 100.02 -7.6294E-06 559 99 14 0 0 0 0.05491 1 55355 20.97 20.97 1 1.5026 1.2796 0 86081000 31984000 54097000 16526 1771 6252 6397 25806 25806 IGEEQSPEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSPEDAEDGPPELLFIHGGHTAK_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.3463 4 719.095159 2872.35153 70653.14 0.45542 0.00032749 -0.13989 -0.0001006 0.31553 0.00022689 719.345543360825 721.349250195122 89.213 1.3189 89.213 88.654 89.973 0 726 107 10 0 0 0 1.751E-06 3 54102 46.938 46.938 1 0.726 0.82238 0 90770000 47236000 43534000 16527 1695 6253 6398 25807;25808;25809 25809 IGEEQSPEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSPEDAEDGPPELLFIHGGHTAK_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.345 4 719.095159 2872.35153 70373.43 0.78523 0.00056465 -0.12588 -9.0519E-05 0.65935 0.00047413 719.345724231748 721.349301758245 87.701 1.0168 87.701 87.138 88.154 0 633 82 11 0 0 0 1.219E-06 3 53830 47.73 47.73 1 0.7631 0.87174 0 156580000 88161000 68421000 16528 1695 6253 6398 25810;25811;25812 25811 IGEEQSPEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSPEDAEDGPPELLFIHGGHTAK_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 958.4567 3 958.457787 2872.35153 NaN NaN NaN -0.17628 -0.00016896 NaN NaN NaN NaN 87.536 0.45596 87.536 87.311 87.767 0 0 0 0 0.022842 2 53923 26.6 21.392 1 NaN NaN 0 9316000 9316000 0 16529 1695 6253 6398 25813;25814 25813 IGEEQSPEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSPEDAEDGPPELLFIHGGHTAK_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.6008 4 719.095159 2872.35153 69958.38 0.57642 0.0004145 -0.056864 -4.0891E-05 0.51956 0.00037361 719.345477898526 721.349434145005 100.39 1.2622 100.39 100.06 101.32 0 722 92 13 0 0 0 0.0021331 1 55769 29.675 27.564 1 1.7658 1.4922 0 57539000 20725000 36813000 16530 1695 6253 6398 25815 25815 IGEEQSPEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSPEDAEDGPPELLFIHGGHTAK_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 959.1268 3 958.457787 2872.35153 62599.64 0.13273 0.00012722 0.25873 0.00024798 0.39146 0.0003752 958.791676420199 961.463838944839 100.41 0.54708 100.41 100.16 100.7 0 228 41 8 0 0 0 0.055229 1 55910 9.4314 9.4314 1 1.7619 1.4367 0 6507000 2362100 4144900 16531 1695 6253 6398 25816 25816 IGEGTYGVVYK 11 1 0 Unmodified _IGEGTYGVVYK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6;K7ELV5;A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9;A0A024R8R3;Q00526;G3V317 A0A024QZP7;A0A024RB10 A0A024QZP7 CDC2;CDK1;DKFZp686L20222;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.3185 2 593.311146 1184.60774 NaN NaN NaN -0.32229 -0.00019122 NaN NaN NaN NaN 57.623 0.67028 57.623 57.423 58.093 0 0 0 0 7.8582E-05 1 33303 95.502 22.574 1 NaN NaN 0 85522000 0 85522000 16532 25;318 6254 6399 25817 25817 IGEGTYGVVYK 11 1 0 Unmodified _IGEGTYGVVYK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6;K7ELV5;A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9;A0A024R8R3;Q00526;G3V317 A0A024QZP7;A0A024RB10 A0A024QZP7 CDC2;CDK1;DKFZp686L20222;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.3181 2 593.311146 1184.60774 79278.82 0.46479 0.00027576 -0.15378 -9.1241E-05 0.31101 0.00018452 593.310996265907 597.318112555611 68.393 0.67204 68.393 68.164 68.836 0 273 49 8 0 0 0 0.00034577 2 35666 85.731 22.908 1 1.4217 1.1512 0 23703000 9165100 14538000 16533 25;318 6254 6399 25818;25819 25818 IGEGTYGVVYK 11 1 0 Unmodified _IGEGTYGVVYK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6;K7ELV5;A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9;A0A024R8R3;Q00526;G3V317 A0A024QZP7;A0A024RB10 A0A024QZP7 CDC2;CDK1;DKFZp686L20222;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.3179 2 593.311146 1184.60774 79057.95 0.5322 0.00031576 -0.42634 -0.00025295 0.10587 6.2812E-05 593.310777776163 597.3179887977 68.973 0.77062 68.973 68.677 69.448 0 306 54 9 0 0 0 0.0067996 2 35205 62.463 18.812 1 1.4478 1.1636 0 16891000 6370900 10520000 16534 25;318 6254 6399 25820;25821 25820 IGEGVFGEVFQTIADHTPVAIK 22 1 0 Unmodified _IGEGVFGEVFQTIADHTPVAIK_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.7496 3 776.745992 2327.21615 70364.66 0.68304 0.00053055 -0.99946 -0.00077632 -0.31642 -0.00024578 777.080397117657 779.750852638676 133.45 0.18175 133.45 133.32 133.5 0 13 4 5 0 0 0 1.5729E-08 1 87425 68.552 58.009 1 1.6494 1.7812 0 36927000 17653000 19274000 16535 646 6255 6400 25822 25822 IGEGVFGEVFQTIADHTPVAIK 22 1 0 Unmodified _IGEGVFGEVFQTIADHTPVAIK_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.7519 3 776.745992 2327.21615 68013.59 0.45831 0.00035599 -0.71585 -0.00055603 -0.25754 -0.00020004 777.080478411288 779.750729963915 133.42 0.18063 133.42 133.3 133.48 0 24 4 9 0 0 0 0.039299 1 89674 12.677 9.0148 1 1.0797 1.2117 0 55302000 27340000 27962000 16536 646 6255 6400 25823 25823 IGEVDVEQHTLAK 13 1 0 Unmodified _IGEVDVEQHTLAK_ 0 0 0 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9;Q9BWU7 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.5898 3 480.256062 1437.74636 86143.91 0.13258 6.3675E-05 -0.49294 -0.00023674 -0.36035 -0.00017306 480.590107309566 482.927398241438 46.845 0.82135 46.845 46.353 47.174 0 324 74 9 0 0 0 5.2209E-05 2 25387 71.976 62.843 1 1.0915 1.234 0 145060000 66814000 78248000 16537 1483 6256 6401 25824;25825 25825 IGEVDVEQHTLAK 13 1 0 Unmodified _IGEVDVEQHTLAK_ 0 0 0 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9;Q9BWU7 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.8833 2 719.880456 1437.74636 70818.52 0.81058 0.00058352 -0.62374 -0.00044902 0.18683 0.0001345 719.880574934354 723.887582700634 46.752 0.24492 46.752 46.54 46.784 0 67 22 6 0 0 0 4.8415E-05 1 25284 90.913 90.913 1 0.65829 0.70418 0 32339000 20221000 12118000 16538 1483 6256 6401 25826 25826 IGEVDVEQHTLAK 13 1 0 Unmodified _IGEVDVEQHTLAK_ 0 0 0 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9;Q9BWU7 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.8398 2 719.880456 1437.74636 70818.55 0.71182 0.00051243 -0.30594 -0.00022024 0.40589 0.00029219 719.879985218603 723.887682730088 46.853 0.26745 46.853 46.774 47.041 0 90 24 6 0 0 0 0.009803 1 25446 61.213 61.213 1 0.6395 0.70424 0 55296000 34037000 21259000 16539 1483 6256 6401 25827 25827 IGEVDVEQHTLAK 13 1 0 Unmodified _IGEVDVEQHTLAK_ 0 0 0 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9;Q9BWU7 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.5897 3 480.256062 1437.74636 86635.56 0.28144 0.00013516 -0.73982 -0.0003553 -0.45838 -0.00022014 480.590193071197 482.927398245176 45.561 0.87303 45.561 45.333 46.206 0 308 74 9 0 0 0 1.7257E-05 2 24959 96.23 87.845 1 0.89588 1.0346 0 193560000 102240000 91319000 16540 1483 6256 6401 25828;25829 25829 IGEVDVEQHTLAK 13 1 0 Unmodified _IGEVDVEQHTLAK_ 0 0 0 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9;Q9BWU7 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.8829 2 719.880456 1437.74636 70235.28 0.8055 0.00057986 -0.13854 -9.973E-05 0.66696 0.00048013 719.880229462545 723.887799645837 45.553 0.25588 45.553 45.382 45.637 0 107 22 8 0 0 0 1.0291E-38 2 24993 216.04 216.04 1 0.77128 0.85294 0 45124000 25862000 19262000 16541 1483 6256 6401 25830;25831 25831 IGEVDVEQHTLAK 13 1 0 Unmodified _IGEVDVEQHTLAK_ 0 0 0 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9;Q9BWU7 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.8876 2 719.880456 1437.74636 71915.73 0.76613 0.00055152 -0.27106 -0.00019513 0.49507 0.00035639 719.880160143923 723.88727743746 54.163 0.46164 54.163 53.924 54.385 0 156 37 6 0 0 0 0.045736 1 26932 33.87 33.87 1 1.074 0.84641 0 4048000 2230700 1817300 16542 1483 6256 6401 25832 25832 IGEVDVEQHTLAK 13 1 0 Unmodified _IGEVDVEQHTLAK_ 0 0 0 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9;Q9BWU7 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.9276 3 480.256062 1437.74636 86953.19 0.20351 9.7737E-05 -0.20887 -0.00010031 -0.0053616 -2.5749E-06 480.255833832026 482.92734699761 54.64 0.77913 54.64 54.369 55.148 0 324 58 8 0 0 0 0.040016 1 26610 20.734 20.734 1 1.1118 0.90908 0 12633000 5781600 6851700 16543 1483 6256 6401 25833 25833 IGEVDVEQHTLAK 13 1 0 Unmodified _IGEVDVEQHTLAK_ 0 0 0 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9;Q9BWU7 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.8809 2 719.880456 1437.74636 71459.73 0.55664 0.00040071 -0.1359 -9.7833E-05 0.42074 0.00030288 719.880340159634 723.887368764479 54.637 0.45353 54.637 54.43 54.884 0 170 34 6 0 0 0 0.011972 1 26663 45.653 45.653 1 1.1833 0.95691 0 2973500 1285900 1687600 16544 1483 6256 6401 25834 25834 IGEVWASK 8 1 0 Unmodified _IGEVWASK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.2499 2 445.242535 888.470518 NaN NaN NaN 0.42768 0.00019042 NaN NaN NaN NaN 45.966 0.38487 45.966 45.659 46.044 0 0 0 0 0.028086 1 25266 60.436 30.251 1 NaN NaN 0 7655000 0 7655000 16545 1945 6257 6402 25835 25835 IGEVWASK 8 1 0 Unmodified _IGEVWASK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 449.2495 2 445.242535 888.470518 93250.03 -0.045529 -2.0271E-05 0.080715 3.5938E-05 0.035186 1.5666E-05 445.242577063345 449.249578729656 53.838 0.73611 53.838 53.535 54.271 0 192 52 6 0 0 0 0.027337 1 26199 53.968 25.861 1 2.5321 1.994 0 3874500 1107000 2767500 16546 1945 6257 6402 25836 25836 IGFDVVTLSGTR 12 0 1 Unmodified _IGFDVVTLSGTR_ 0 0 0 Q5TDE9;Q5TDF0;Q9BSD7 Q5TDE9 Q5TDE9 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8528 2 632.848427 1263.6823 NaN NaN NaN -0.17608 -0.00011144 NaN NaN NaN NaN 103.27 0.559 103.27 103.07 103.63 0 0 0 0 0.00041768 1 63686 89.171 68.27 1 NaN NaN 0 6152700 0 6152700 16547 1826 6258 6403 25837 25837 IGFDVVTLSGTR 12 0 1 Unmodified _IGFDVVTLSGTR_ 0 0 0 Q5TDE9;Q5TDF0;Q9BSD7 Q5TDE9 Q5TDE9 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.8525 2 632.848427 1263.6823 77579.41 0.97742 0.00061856 0.028905 1.8293E-05 1.0063 0.00063685 632.848490200613 637.852362345314 102.74 0.65811 102.74 102.29 102.95 0 162 51 4 0 0 0 0.00018714 2 64767 77.379 76.143 1 1.4293 1.4332 0 17303000 6680200 10623000 16548 1826 6258 6403 25838;25839 25838 IGFFNQQYAEQLR 13 0 1 Unmodified _IGFFNQQYAEQLR_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.4113 2 807.407172 1612.79979 68418.76 0.9592 0.00077446 0.11584 9.353E-05 1.075 0.00086799 807.407162263534 812.411307466827 98.795 0.75704 98.795 98.449 99.206 7.6294E-06 271 62 5 0 0 0 1.4189E-09 2 60319 123.86 123.86 1 0.77576 0.79329 0 31541000 17399000 14141000 16549 1926 6259 6404 25840;25841 25840 IGFFNQQYAEQLR 13 0 1 Unmodified _IGFFNQQYAEQLR_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.4114 2 807.407172 1612.79979 69094.12 0.64489 0.00052069 0.36724 0.00029651 1.0121 0.0008172 807.407321322626 812.411606749068 98.089 0.78268 98.089 97.688 98.471 0 320 68 6 0 0 0 2.8566E-13 2 61246 125.75 125.75 1 0.74741 0.81729 0 35144000 18420000 16724000 16550 1926 6259 6404 25842;25843 25843 IGFFNQQYAEQLR 13 0 1 Unmodified _IGFFNQQYAEQLR_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.4117 2 807.407172 1612.79979 67219.1 0.83766 0.00067633 -0.13003 -0.00010499 0.70763 0.00057134 807.407467521193 812.411251346439 111.45 0.58959 111.45 111.13 111.72 0 148 27 7 0 0 0 4.1308E-05 2 64575 97.456 97.456 1 0.64364 0.52543 0 14475000 8545300 5930200 16551 1926 6259 6404 25844;25845 25844 IGFFNQQYAEQLR 13 0 1 Unmodified _IGFFNQQYAEQLR_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 812.4121 2 807.407172 1612.79979 66739.94 0.63293 0.00051103 0.089101 7.1941E-05 0.72203 0.00058297 807.408447814862 812.411300202122 111.33 0.63441 111.33 110.99 111.63 0 140 32 7 0 0 0 0.00013828 2 63532 88.948 78.995 1 0.64668 0.52844 0 13067000 7541600 5525400 16552 1926 6259 6404 25846;25847 25846 IGFIEEVK 8 1 0 Unmodified _IGFIEEVK_ 0 0 0 Q96P63;Q3SYB5 Q96P63 Q96P63 SERPINB12 Serpin B12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.7659 2 467.765843 933.517133 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.952 1 75.952 75.452 76.452 0 0 0 0 0.0049299 1 44724 87.323 37.964 1 16553 1982 6260 6405 25848 25848 IGFSVQPDR 9 0 1 Unmodified _IGFSVQPDR_ 0 0 0 E7EMW7;O95071 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.7697 2 509.769448 1017.52434 NaN NaN NaN 0.14144 7.21E-05 NaN NaN NaN NaN 59.411 0.4283 59.411 59.138 59.566 3.8147E-06 0 0 0 0.037468 1 33758 51.066 15.621 1 NaN NaN 0 7949400 7949400 0 16554 1218 6261 6406 25849 25849 IGGALSVALPALLLR 15 0 1 Unmodified _IGGALSVALPALLLR_ 0 0 0 Q6P9C2;B2RAL9;Q99956 Q6P9C2 Q6P9C2 DUSP9 Dual specificity protein phosphatase;Dual specificity protein phosphatase 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.0287 2 732.469044 1462.92353 71913.63 0.62621 0.00045868 0.40928 0.00029978 1.0355 0.00075847 732.970984200375 737.473145227117 133.46 0.1553 133.46 133.37 133.53 0 12 3 5 0 0 0 2.3991E-07 1 89694 107.79 98.133 1 0.63085 0.65232 0 21674000 13651000 8022700 16555 872 6262 6407 25850 25850 IGGGIDVPVPR 11 0 1 Unmodified _IGGGIDVPVPR_ 0 0 0 A0A087WTP3;Q92945;M0R0I5;B4DV73 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.3143 2 540.314023 1078.61349 85021.25 0.85055 0.00045956 -0.19437 -0.00010502 0.65618 0.00035454 540.313855288814 545.317993518438 82.192 0.6616 82.192 81.847 82.508 0 208 56 5 0 0 0 0.00048356 1 49095 74.92 59.66 1 1.8701 1.9146 0 26201000 7645800 18556000 16556 403 6263 6408 25851 25851 IGGGIDVPVPR 11 0 1 Unmodified _IGGGIDVPVPR_ 0 0 0 A0A087WTP3;Q92945;M0R0I5;B4DV73 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.3182 2 540.314023 1078.61349 83200.25 0.73548 0.00039739 -0.16451 -8.8887E-05 0.57097 0.0003085 540.313837141017 545.318127603335 81.114 0.58594 81.114 80.816 81.402 7.6294E-06 197 50 6 0 0 0 0.00036511 2 49528 84.213 66.393 1 1.8058 1.909 0 23567000 7367800 16199000 16557 403 6263 6408 25852;25853 25853 IGGGPGDAADVQR 13 0 1 Unmodified _IGGGPGDAADVQR_ 0 0 0 A0A024R5J9;Q9BRS0;Q9UBS0 A0A024R5J9 A0A024R5J9 RPS6KB2 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase beta-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.8078 2 606.802008 1211.58946 NaN NaN NaN -0.47861 -0.00029042 NaN NaN NaN NaN 27.153 0.12637 27.153 27.083 27.209 0 0 0 0 0.004177 1 12396 62.408 26.012 1 NaN NaN 0 2529000 0 2529000 16558 183 6264 6409 25854 25854 IGGGPGDAADVQR 13 0 1 Unmodified _IGGGPGDAADVQR_ 0 0 0 A0A024R5J9;Q9BRS0;Q9UBS0 A0A024R5J9 A0A024R5J9 RPS6KB2 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase beta-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.8045 2 606.802008 1211.58946 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.771 1 26.771 26.271 27.271 -1.9073E-06 0 0 0 0.0096516 1 12155 54.471 26.297 1 16559 183 6264 6409 25855 25855 IGGIGTVPVGR 11 0 1 Unmodified _IGGIGTVPVGR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q05639;Q14222;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.3127 2 513.308741 1024.60293 83399.1 0.1986 0.00010194 -0.03228 -1.657E-05 0.16632 8.5372E-05 513.309181568948 518.312991895202 65.246 1.4901 65.246 64.719 66.209 0 904 134 10 0 0 0 1.4269E-05 4 37807 107.15 72.968 1 2.3462 2.7956 0 2248100000 649960000 1598100000 16560 1658;1790 6265 6410 25856;25857;25858;25859 25858 IGGIGTVPVGR 11 0 1 Unmodified _IGGIGTVPVGR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q05639;Q14222;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.3084 2 513.308741 1024.60293 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.665 1 66.665 66.165 67.165 0 0 0 0 0.0039888 1 38478 66.27 42.842 1 16561 1658;1790 6265 6410 25860 25860 IGGIGTVPVGR 11 0 1 Unmodified _IGGIGTVPVGR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q05639;Q14222;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.313 2 513.308741 1024.60293 83140.31 0.40185 0.00020627 -0.1252 -6.4267E-05 0.27665 0.00014201 513.309196644374 518.312963518711 64.044 1.4073 64.044 63.577 64.984 0 890 127 10 0 0 0 3.3284E-08 4 37934 120.12 80.118 1 2.3908 2.8491 0 2820900000 802120000 2018800000 16562 1658;1790 6265 6410 25861;25862;25863;25864 25863 IGGIGTVPVGR 11 0 1 Unmodified _IGGIGTVPVGR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q05639;Q14222;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.3134 2 513.308741 1024.60293 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.318 1 66.318 65.818 66.818 0 0 0 0 0.034814 1 39178 46.819 27.841 1 16563 1658;1790 6265 6410 25865 25865 IGGIGTVPVGR 11 0 1 Unmodified _IGGIGTVPVGR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q05639;Q14222;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.3132 2 513.308741 1024.60293 83418.45 0.50652 0.00026 -0.055669 -2.8575E-05 0.45085 0.00023143 513.308896101312 518.312825797566 74.693 1.6837 74.693 74.223 75.906 0 645 120 10 0 0 0 0.00036511 4 39511 84.213 51.372 1 1.6399 1.4217 0 174040000 65207000 108830000 16564 1658;1790 6265 6410 25866;25867;25868;25869 25867 IGGIGTVPVGR 11 0 1 Unmodified _IGGIGTVPVGR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q05639;Q14222;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.313 2 513.308741 1024.60293 83566.8 0.22236 0.00011414 -0.074402 -3.8191E-05 0.14796 7.595E-05 513.308838358189 518.31280892229 74.964 1.8011 74.964 74.539 76.34 7.6294E-06 620 121 10 0 0 0 0.00092259 4 38860 71.451 44.197 1 1.669 1.4574 0 147140000 53007000 94137000 16565 1658;1790 6265 6410 25870;25871;25872;25873 25870 IGGVQQDTILAEGLHFR 17 0 1 Unmodified _IGGVQQDTILAEGLHFR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.0037 3 618.667125 1852.97955 76299.32 0.92237 0.00057064 -0.2439 -0.00015089 0.67847 0.00041975 618.667183838135 622.003031815762 102.08 1.5362 102.08 101.34 102.87 0 852 125 11 0 0 0 1.3131E-10 3 62970 118.21 118.21 1 1.4709 1.7415 0 390560000 163900000 226660000 16566 1328 6266 6411 25874;25875;25876 25876 IGGVQQDTILAEGLHFR 17 0 1 Unmodified _IGGVQQDTILAEGLHFR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.3377 3 618.667125 1852.97955 76244.99 0.35483 0.00021952 0.00099233 6.1392E-07 0.35582 0.00022013 618.667353983638 622.003195931754 100.93 1.2805 100.93 100.41 101.69 0 809 101 12 0 0 0 1.5872E-57 3 63203 158.17 148.77 1 1.4968 1.7448 0 474860000 193470000 281390000 16567 1328 6266 6411 25877;25878;25879 25877 IGGVQQDTILAEGLHFR 17 0 1 Unmodified _IGGVQQDTILAEGLHFR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.0005 2 927.497049 1852.97955 63239.84 0.46467 0.00043098 0.5469 0.00050724 1.0116 0.00093823 927.999796466922 932.501301462875 100.95 0.59691 100.95 100.63 101.23 0 167 45 6 0 0 0 0.0090695 2 63483 46.069 46.069 1 0.84795 0.83168 0 13970000 6972500 6997500 16568 1328 6266 6411 25880;25881 25880 IGGVQQDTILAEGLHFR 17 0 1 Unmodified _IGGVQQDTILAEGLHFR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.6677 3 618.667125 1852.97955 75657.94 0.98278 0.00060801 -0.24821 -0.00015356 0.73457 0.00045445 618.667227512246 622.003032682783 113.69 1.0093 113.69 113.44 114.45 7.6294E-06 292 44 13 0 0 0 4.83E-46 2 66266 173.03 173.03 1 2.387 2.0611 0 90918000 25512000 65405000 16569 1328 6266 6411 25882;25883 25883 IGGVQQDTILAEGLHFR 17 0 1 Unmodified _IGGVQQDTILAEGLHFR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.3381 3 618.667125 1852.97955 76696.58 0.58583 0.00036244 -0.03114 -1.9265E-05 0.55469 0.00034317 619.001451308347 622.003168182204 113.51 0.86502 113.51 113.26 114.13 0 288 40 13 0 0 0 1.9939E-13 2 65160 105 95.594 1 2.4802 2.1645 0 71038000 22456000 48582000 16570 1328 6266 6411 25884;25885 25884 IGGVQQDTILAEGLHFR 17 0 1 Unmodified _IGGVQQDTILAEGLHFR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 932.5024 2 927.497049 1852.97955 64737.06 0.5683 0.0005271 -1.0203 -0.0009463 -0.45198 -0.00041921 927.493638317647 933.001972524507 113.52 0.4769 113.52 113.35 113.83 0 68 22 6 0 0 0 0.006868 1 65218 33.782 31.878 1 1.7538 1.5363 0 3575000 1179900 2395100 16571 1328 6266 6411 25886 25886 IGHPAPNFK 9 1 0 Unmodified _IGHPAPNFK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 330.1893 3 327.51526 979.52395 104203.2 -0.16454 -5.3889E-05 0.39747 0.00013018 0.23293 7.6288E-05 327.515449701509 330.186698873488 24.681 0.34403 24.681 24.538 24.883 0 89 15 9 0 0 0 0.0066778 2 10315 41.448 38.04 1 3.0609 3.4468 0 117040000 33040000 84002000 16572 1690 6267 6412 25887;25888 25887 IGHPAPNFK 9 1 0 Unmodified _IGHPAPNFK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 327.515 3 327.51526 979.52395 105758.6 -0.040341 -1.3212E-05 0.11457 3.7523E-05 0.074227 2.431E-05 327.515281336078 330.186625421028 24.292 0.51764 24.292 24.034 24.552 0 108 22 8 0 0 0 0.0055326 2 10006 52.482 52.482 1 3.1187 3.5413 0 141940000 36743000 105200000 16573 1690 6267 6412 25889;25890 25890 IGHPAPNFK 9 1 0 Unmodified _IGHPAPNFK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7763 2 490.769252 979.52395 NaN NaN NaN 0.14871 7.2981E-05 NaN NaN NaN NaN 24.293 0.64623 24.293 24.127 24.773 0 0 0 0 3.5426E-06 1 10097 117.16 91.266 1 NaN NaN 0 94872000 0 94872000 16574 1690 6267 6412 25891 25891 IGHPAPNFK 9 1 0 Unmodified _IGHPAPNFK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.7696 2 490.769252 979.52395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.299 1 24.299 23.799 24.799 0 0 0 0 3.2972E-09 1 10051 130.77 98.811 1 16575 1690 6267 6412 25892 25892 IGHVGMQIEHIIENIVAVTK 20 1 0 Oxidation (M) _IGHVGM(ox)QIEHIIENIVAVTK_ IGHVGM(1)QIEHIIENIVAVTK IGHVGM(41.91)QIEHIIENIVAVTK 0 1 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.312 4 555.056957 2216.19872 79877.2 0.5566 0.00030894 -0.48224 -0.00026767 0.074355 4.1271E-05 555.307372110132 557.561595789848 134.61 0.2988 134.61 134.5 134.8 0 37 7 9 0 0 0 3.4309E-05 1 82281 41.912 41.912 1 0.57737 0.45132 0 16246000 10748000 5498100 16576 1415 6268 6413 25893 25893 1108 IGHVGMQIEHIIENIVAVTK 20 1 0 Oxidation (M) _IGHVGM(ox)QIEHIIENIVAVTK_ IGHVGM(1)QIEHIIENIVAVTK IGHVGM(70.09)QIEHIIENIVAVTK 0 1 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.3115 4 555.056957 2216.19872 79604.06 0.69576 0.00038619 -0.31314 -0.00017381 0.38262 0.00021238 555.307698295714 557.310969901036 134.54 0.26697 134.54 134.44 134.71 1.5259E-05 45 7 10 0 0 0 5.2401E-07 2 81318 70.094 70.094 1 0.58034 0.4816 0 36097000 24265000 11832000 16577 1415 6268 6413 25894;25895 25895 1108 IGIEIIK 7 1 0 Unmodified _IGIEIIK_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z5E7;B7Z4F6 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.2601 2 393.260197 784.50584 96936.92 -0.13941 -5.4826E-05 0.17279 6.7951E-05 0.033376 1.3125E-05 393.260118011181 397.267288788991 81.473 0.71523 81.473 81.171 81.887 7.6294E-06 138 62 4 0 0 0 0.026792 2 48458 81.297 6.0772 1 1.9264 1.8883 0 20831000 6590400 14240000 16578 143 6269 6414 25896;25897 25896 IGIEIIK 7 1 0 Unmodified _IGIEIIK_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z5E7;B7Z4F6 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.2606 2 393.260197 784.50584 98265.48 0.3085 0.00012132 -0.31241 -0.00012286 -0.0039105 -1.5378E-06 393.26004084464 397.267083252698 80.228 0.64014 80.228 79.951 80.591 0 153 50 5 0 0 0 0.027742 1 48802 73.039 6.0453 1 1.7478 1.8695 0 21145000 7093900 14051000 16579 143 6269 6414 25898 25898 IGIFGQDEDVTSK 13 1 0 Unmodified _IGIFGQDEDVTSK_ 0 0 0 A0A0S2Z3L2;P16615;H7C5W9 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.8593 2 704.851364 1407.68817 71389.42 0.9088 0.00064057 0.050174 3.5365E-05 0.95897 0.00067593 704.851004704688 708.858232909727 79.668 0.53049 79.668 79.404 79.934 0 133 46 4 0 0 0 0.0015986 1 47275 57.175 57.175 1 1.8291 1.9063 0 14960000 3920700 11039000 16580 554 6270 6415 25899 25899 IGIFGQDEDVTSK 13 1 0 Unmodified _IGIFGQDEDVTSK_ 0 0 0 A0A0S2Z3L2;P16615;H7C5W9 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.8584 2 704.851364 1407.68817 71112.09 0.55192 0.00038902 -0.81093 -0.00057159 -0.25901 -0.00018256 704.850773252928 708.857733711217 78.631 0.48138 78.631 78.448 78.93 0 128 41 5 0 0 0 0.00013338 1 47706 89.805 89.805 1 1.8687 1.8841 0 28094000 8080600 20013000 16581 554 6270 6415 25900 25900 IGILQQLLR 9 0 1 Unmodified _IGILQQLLR_ 0 0 0 F8W1U0;F8W130;Q12815 F8W1U0 F8W1U0 TROAP Tastin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.3423 2 527.342584 1052.67061 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.13 1 116.13 115.63 116.63 0 0 0 0 0.026309 1 74082 54.205 28.646 1 16582 1265 6271 6416 25901 25901 IGILQQLLR 9 0 1 Unmodified _IGILQQLLR_ 0 0 0 F8W1U0;F8W130;Q12815 F8W1U0 F8W1U0 TROAP Tastin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.3467 2 527.342584 1052.67061 NaN NaN NaN -0.026537 -1.3994E-05 NaN NaN NaN NaN 115.42 0.30446 115.42 115.21 115.52 0 0 0 0 0.002233 1 75260 81.784 44.225 1 NaN NaN 0 1763800 0 1763800 16583 1265 6271 6416 25902 25902 IGKPHTVPCK 10 2 0 Unmodified _IGKPHTVPCK_ 0 0 1 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.5464 3 379.546343 1135.6172 100356.1 -0.18288 -6.9413E-05 -0.2052 -7.7883E-05 -0.38808 -0.0001473 379.546402179971 384.889135237449 15.263 0.49934 15.263 15.094 15.594 0 74 21 7 0 0 0 0.0067598 1 2944 48.981 45.037 1 0.7619 0.87922 0 29918000 13543000 16375000 16584 1485 6272 6417 25903 25903 IGKPHTVPCK 10 2 0 Unmodified _IGKPHTVPCK_ 0 0 1 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 379.5463 3 379.546343 1135.6172 93047.49 -0.012686 -4.815E-06 -0.14125 -5.3612E-05 -0.15394 -5.8427E-05 379.546408980874 384.889132977333 16.517 0.53623 16.517 16.389 16.926 0 164 34 10 0 0 0 0.00089697 2 3251 71.349 71.349 1 0.76354 0.64846 0 42770000 23061000 19709000 16585 1485 6272 6417 25904;25905 25904 IGKPHTVPCK 10 2 0 Unmodified _IGKPHTVPCK_ 0 0 1 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.8163 2 568.815876 1135.6172 76834.95 0.32241 0.00018339 -0.079209 -4.5055E-05 0.2432 0.00013834 568.815884770658 576.830133917365 16.538 0.46439 16.538 16.414 16.878 0 104 28 9 0 0 0 0.0011975 1 3253 105.98 89.772 1 0.7506 0.64145 0 12864000 7551600 5312600 16586 1485 6272 6417 25906 25906 IGKPHTVPCK 10 2 0 Unmodified _IGKPHTVPCK_ 0 0 1 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.8163 2 568.815876 1135.6172 76391.43 0.078867 4.4861E-05 0.081566 4.6396E-05 0.16043 9.1257E-05 568.815974947088 576.830167876925 16.428 0.39877 16.428 16.304 16.702 0 148 29 8 0 0 0 0.044973 1 2900 66.92 56.21 1 0.79006 0.66747 0 10702000 5884800 4817700 16587 1485 6272 6417 25907 25907 IGKPHTVPCK 10 2 0 Unmodified _IGKPHTVPCK_ 0 0 1 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 384.8891 3 379.546343 1135.6172 90617.98 -0.3131 -0.00011884 0.065328 2.4795E-05 -0.24777 -9.404E-05 379.54650560069 384.889230527414 16.436 0.44383 16.436 16.289 16.733 0 195 32 10 0 0 0 0.016233 1 2907 40.727 40.727 1 0.81466 0.69216 0 28126000 15670000 12456000 16588 1485 6272 6417 25908 25908 IGLETSLR 8 0 1 Unmodified _IGLETSLR_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 444.7617 2 444.761092 887.507631 NaN NaN NaN 0.58929 0.00026209 NaN NaN NaN NaN 70.295 1.7793 70.295 70.088 71.867 0 0 0 0 0.028018 1 36916 60.478 35.627 1 NaN NaN 0 10713000 10713000 0 16589 2120 6273 6418 25909 25909 IGLETSLR 8 0 1 Unmodified _IGLETSLR_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 449.7659 2 444.761092 887.507631 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.317 1 70.317 69.817 70.817 0 0 0 0 0.045752 1 36915 56.014 29.791 1 16590 2120 6273 6418 25910 25910 IGLETSLR 8 0 1 Unmodified _IGLETSLR_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 449.7654 2 444.761092 887.507631 89987.75 -0.25717 -0.00011438 0.56063 0.00024935 0.30347 0.00013497 444.761303088185 449.765589144413 70.693 1.9673 70.693 70.266 72.233 0 570 145 7 0 0 0 0.041092 1 36333 46.994 15.059 1 0.92668 0.78617 0 18795000 9264500 9530200 16591 2120 6273 6418 25911 25911 IGLFNSSADR 10 0 1 Unmodified _IGLFNSSADR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.2826 2 540.277638 1078.54072 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.391 1 61.391 60.891 61.891 3.8147E-06 0 0 0 0.016751 1 35962 55.064 32.324 1 16592 1479 6274 6419 25912 25912 IGLFNSSADR 10 0 1 Unmodified _IGLFNSSADR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.2779 2 540.277638 1078.54072 81844.45 0.36987 0.00019983 0.038674 2.0894E-05 0.40855 0.00022073 540.277583183825 545.281748572773 71.483 0.75073 71.483 70.977 71.727 0 243 51 8 0 0 0 0.0033968 2 37573 64.711 56.491 1 0.48418 0.39667 0 16613000 11265000 5347800 16593 1479 6274 6419 25913;25914 25913 IGLFNSSADR 10 0 1 Unmodified _IGLFNSSADR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.2819 2 540.277638 1078.54072 81948.2 0.13166 7.1135E-05 0.12936 6.9891E-05 0.26103 0.00014103 540.277623555745 545.281824426777 71.842 0.71119 71.842 71.406 72.117 0 225 47 8 0 0 0 0.010458 2 37102 53.327 38.661 1 0.51864 0.43513 0 16852000 10732000 6120700 16594 1479 6274 6419 25915;25916 25916 IGLFSHAEIK 10 1 0 Unmodified _IGLFSHAEIK_ 0 0 0 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 372.2134 3 372.213358 1113.61824 98559.64 0.30527 0.00011363 -0.44726 -0.00016647 -0.14198 -5.2848E-05 372.213152340688 374.884531888011 65.631 0.91779 65.631 65.201 66.119 0 353 85 6 0 0 0 0.022972 1 37754 33.088 22.331 1 0.89684 0.91399 0 17924000 8654900 9268800 16595 925 6275 6420 25917 25917 IGLFSHAEIK 10 1 0 Unmodified _IGLFSHAEIK_ 0 0 0 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 372.2134 3 372.213358 1113.61824 98310.15 0.14165 5.2723E-05 -0.51453 -0.00019151 -0.37288 -0.00013879 372.213164036721 374.884545343741 62.353 1.2013 62.353 61.971 63.172 0 267 109 6 0 0 0 0.0045058 1 36851 48.981 34.863 1 0.97965 1.0128 0 24947000 14825000 10122000 16596 925 6275 6420 25918 25918 IGLFSHAEIK 10 1 0 Unmodified _IGLFSHAEIK_ 0 0 0 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 374.8846 3 372.213358 1113.61824 NaN NaN NaN -0.41112 -0.00015302 NaN NaN NaN NaN 62.529 0.82433 62.529 62.386 63.21 0 0 0 0 0.048375 1 36716 31.843 12.081 1 NaN NaN 0 17761000 0 17761000 16597 925 6275 6420 25919 25919 IGLIQGNR 8 0 1 Unmodified _IGLIQGNR_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;B4E162;A0A0S2Z4A8;Q7KYX9;F8VP00;P78457 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.7664 2 435.761426 869.5083 NaN NaN NaN 0.069472 3.0273E-05 NaN NaN NaN NaN 42.032 0.5958 42.032 41.695 42.29 0 0 0 0 0.0061719 1 22279 86.086 13.048 1 NaN NaN 0 46881000 0 46881000 16598 61 6276 6421 25920 25920 IGLIQGNR 8 0 1 Unmodified _IGLIQGNR_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;B4E162;A0A0S2Z4A8;Q7KYX9;F8VP00;P78457 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.7614 2 435.761426 869.5083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.97 1 41.97 41.47 42.47 0 0 0 0 0.0080847 1 22207 79.454 31.28 1 16599 61 6276 6421 25921 25921 IGLSNHVR 8 0 1 Unmodified _IGLSNHVR_ 0 0 0 A7E234;Q9H582;Q9NVH8;Q9H8J8;Q9NZF0;A0A087WZL9 A7E234 A7E234 ZNF644 Zinc finger protein 644 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 302.511 3 299.175126 894.503549 117484.5 -0.26116 -7.8133E-05 -0.108 -3.231E-05 -0.36916 -0.00011044 299.175039654798 302.511119924823 23.387 0.28056 23.387 23.25 23.531 0 37 13 4 0 0 0 0.020615 1 9260 33.263 12.742 1 0.66191 0.68671 0 5688400 3353200 2335200 16600 693 6277 6422 25922 25922 IGNVEISQVTIVGIIR 16 0 1 Unmodified _IGNVEISQVTIVGIIR_ 0 0 0 B2R7E8;P15927;Q5TEJ7;B4DQD9 B2R7E8 B2R7E8 RPA2 Replication protein A 32 kDa subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 856.0091 2 856.009261 1710.00397 68503.35 0.8357 0.00071536 -0.085729 -7.3384E-05 0.74997 0.00064198 856.009143413998 861.013347033853 133.49 0.36066 133.49 133.34 133.7 0 52 14 6 0 0 0 0.02134 1 81286 28.053 28.053 1 0.32843 0.28502 0 2421500 1856200 565320 16601 850 6278 6423 25923 25923 IGPILDNSTLQSEVKPILEK 20 2 0 Unmodified _IGPILDNSTLQSEVKPILEK_ 0 0 1 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;E9PH38;B4E1Q0 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.4169 3 732.082493 2193.22565 71171.98 0.84245 0.00061675 -0.064901 -4.7513E-05 0.77755 0.00056923 732.082401640848 737.425380340175 109.39 0.48492 109.39 109.14 109.62 0 222 35 8 0 0 0 2.0028E-09 2 68450 94.463 94.463 1 1.2505 1.4766 0 34671000 16281000 18389000 16602 723 6279 6424 25924;25925 25925 IGPILDNSTLQSEVKPILEK 20 2 0 Unmodified _IGPILDNSTLQSEVKPILEK_ 0 0 1 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;E9PH38;B4E1Q0 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.418 3 732.082493 2193.22565 72396.63 0.78263 0.00057295 -0.027004 -1.9769E-05 0.75563 0.00055318 732.416545041781 737.425400843056 108.82 0.58949 108.82 108.45 109.04 -7.6294E-06 223 41 9 0 0 0 4.2531E-09 1 69684 88.176 88.176 1 1.2746 1.4751 0 44666000 18257000 26408000 16603 723 6279 6424 25926 25926 IGPILDNSTLQSEVKPILEK 20 2 0 Unmodified _IGPILDNSTLQSEVKPILEK_ 0 0 1 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;E9PH38;B4E1Q0 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.0833 3 732.082493 2193.22565 70946.63 0.54675 0.00040026 0.16497 0.00012077 0.71172 0.00052104 732.416654185926 737.425398086808 120.3 0.38885 120.3 120.13 120.52 0 116 17 10 0 0 0 1.5937E-06 2 71374 61.276 61.276 1 1.1525 0.98186 0 23424000 11791000 11633000 16604 723 6279 6424 25927;25928 25928 IGPILDNSTLQSEVKPILEK 20 2 0 Unmodified _IGPILDNSTLQSEVKPILEK_ 0 0 1 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;E9PH38;B4E1Q0 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.4157 3 732.082493 2193.22565 71017.77 0.85821 0.00062828 0.046855 3.4302E-05 0.90506 0.00066258 732.41645319454 737.425344944701 120.05 0.39862 120.05 119.82 120.22 -7.6294E-06 94 16 8 0 0 0 5.4275E-10 2 70330 98.543 93.334 1 1.4388 1.217 0 13054000 6782300 6272000 16605 723 6279 6424 25929;25930 25930 IGPILDTNALQGEVKPVLQK 20 2 0 Unmodified _IGPILDTNALQGEVKPVLQK_ 0 0 1 A8K8B0;P30154;B7Z1G3;H0YDG7 A8K8B0 A8K8B0 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.0915 3 711.747445 2132.2205 73157.1 0.70003 0.00049825 0.3767 0.00026812 1.0767 0.00076636 712.081353123776 717.424904735869 105.48 0.38979 105.48 105.24 105.63 0 74 25 6 0 0 0 3.296E-06 1 66941 51.819 51.819 1 3.5401 4.0364 0 7389500 2320500 5069000 16606 774 6280 6425 25931 25931 IGPLGLSPK 9 1 0 Unmodified _IGPLGLSPK_ 0 0 0 P30050;Q59FI9;D3DS95;Q76P68 P30050 P30050 RPL12;hCG_21173;cICK0721Q.2 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.2766 2 441.276378 880.538203 89314.08 -0.0059166 -2.6108E-06 0.15774 6.9605E-05 0.15182 6.6994E-05 441.276418915811 445.283440719388 69.326 1.4929 69.326 68.836 70.329 0 664 132 8 0 0 0 0.00010107 3 40568 110.03 62.582 1 0.94574 1.1088 0 297390000 149610000 147780000 16607 1532 6281 6426 25932;25933;25934 25934 IGPLGLSPK 9 1 0 Unmodified _IGPLGLSPK_ 0 0 0 P30050;Q59FI9;D3DS95;Q76P68 P30050 P30050 RPL12;hCG_21173;cICK0721Q.2 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2766 2 441.276378 880.538203 89888.07 0.13037 5.753E-05 -0.12852 -5.6715E-05 0.0018485 8.1572E-07 441.276281955007 445.283323184324 68.026 1.4099 68.026 67.523 68.933 0 649 119 8 0 0 0 0.00048269 3 40168 98.629 45.278 1 0.97288 1.1443 0 371900000 186960000 184940000 16608 1532 6281 6426 25935;25936;25937 25936 IGQGYLIK 8 1 0 Unmodified _IGQGYLIK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.2763 2 446.268553 890.522553 90765.52 0.058919 2.6294E-05 -0.37766 -0.00016854 -0.31874 -0.00014224 446.267952269727 450.275566284909 54.667 1.6074 54.667 53.889 55.497 0 687 146 7 0 0 0 0.0077998 1 30589 81.381 21.023 1 1.0112 1.2065 0 723150000 357970000 365170000 16609 1554;936 6282 6427 25938 25938 IGQGYLIK 8 1 0 Unmodified _IGQGYLIK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.2691 2 446.268553 890.522553 91078.51 -0.25786 -0.00011507 -0.0065919 -2.9417E-06 -0.26445 -0.00011802 446.26843621136 450.275569865712 53.284 1.8811 53.284 52.583 54.464 0 791 168 7 0 0 0 0.00071567 2 30427 128.48 40.015 1 1.0112 1.1921 0 675820000 330400000 345420000 16610 1554;936 6282 6427 25939;25940 25939 IGQGYLIK 8 1 0 Unmodified _IGQGYLIK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 450.2752 2 446.268553 890.522553 90747.72 -0.1253 -5.5916E-05 -0.11052 -4.9323E-05 -0.23582 -0.00010524 446.268359846535 450.275503466182 62.797 1.8427 62.797 62.161 64.003 0 680 159 7 0 0 0 0.0046927 2 32135 92.822 32.433 1 1.0819 0.91694 0 59753000 27341000 32412000 16611 1554;936 6282 6427 25941;25942 25941 IGQGYLIK 8 1 0 Unmodified _IGQGYLIK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 450.2756 2 446.268553 890.522553 90042.87 -0.1355 -6.0471E-05 -0.065552 -2.9254E-05 -0.20106 -8.9725E-05 446.268365737298 450.275523128075 63.29 2.3641 63.29 62.618 64.983 0 768 201 7 0 0 0 0.010603 1 31740 71.852 24.103 1 1.0741 0.90939 0 60288000 28620000 31668000 16612 1554;936 6282 6427 25943 25943 IGQQPQQPGAPPQQDYTK 18 1 0 Unmodified _IGQQPQQPGAPPQQDYTK_ 0 0 0 A0A087WTP3;Q92945;M0QYG1;M0R0C6 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 995.5013 2 990.992328 1979.9701 62545.54 0.20739 0.00020552 0.14858 0.00014724 0.35598 0.00035277 990.992925495561 995.500893660023 37.766 0.40978 37.766 37.538 37.948 0 112 33 5 0 0 0 0.0003609 3 19171 46.069 46.069 1 2.4547 2.4145 0 9045300 3161000 5884300 16613 403 6283 6428 25944;25945;25946 25944 IGQQPQQPGAPPQQDYTK 18 1 0 Unmodified _IGQQPQQPGAPPQQDYTK_ 0 0 0 A0A087WTP3;Q92945;M0QYG1;M0R0C6 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 990.9938 2 990.992328 1979.9701 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.736 1 36.736 36.236 37.236 0 0 0 0 0.049983 1 18941 36.284 23.924 1 16614 403 6283 6428 25947 25947 IGRPSETGIIGIIDPECR 18 0 2 Unmodified _IGRPSETGIIGIIDPECR_ 0 0 1 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0;F5GZY8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.0173 3 661.682446 1982.02551 73513.08 0.83452 0.00055219 -0.079958 -5.2906E-05 0.75457 0.00049928 661.682332026741 668.689023936859 101.21 1.0075 101.21 100.69 101.7 0 471 75 9 0 0 0 1.3454E-05 2 62002 66.893 63.555 1 0.6798 0.73893 0 43742000 25135000 18607000 16615 1770 6284 6429 25948;25949 25948 IGRPSETGIIGIIDPECR 18 0 2 Unmodified _IGRPSETGIIGIIDPECR_ 0 0 1 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0;F5GZY8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.0172 3 661.682446 1982.02551 73365.86 0.68658 0.0004543 0.30118 0.00019929 0.98776 0.00065358 662.016623307818 668.35617921709 99.996 1.1308 99.996 99.337 100.47 -7.6294E-06 490 91 9 0 0 0 1.9273E-05 2 62654 60.564 56.845 1 0.73226 0.845 0 65705000 37268000 28436000 16616 1770 6284 6429 25950;25951 25950 IGRPSETGIIGIIDPECR 18 0 2 Unmodified _IGRPSETGIIGIIDPECR_ 0 0 1 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0;F5GZY8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.0174 3 661.682446 1982.02551 73790.41 0.95065 0.00062903 -0.050127 -3.3168E-05 0.90053 0.00059586 662.016823424328 668.689015400204 112.87 0.71323 112.87 112.5 113.21 0 166 33 10 0 0 0 0.00035904 1 65586 40.952 37.614 1 1.0048 0.83285 0 20640000 11808000 8832200 16617 1770 6284 6429 25952 25952 IGRPSETGIIGIIDPECR 18 0 2 Unmodified _IGRPSETGIIGIIDPECR_ 0 0 1 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0;F5GZY8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.0175 3 661.682446 1982.02551 73673.52 0.67702 0.00044797 0.50464 0.00033391 1.1817 0.00078189 662.016901385499 668.355749244278 112.64 0.66653 112.64 112.25 112.91 0 209 33 10 0 0 0 0.0038421 1 64525 30.767 29.269 1 1.4045 1.3003 0 21155000 9516300 11639000 16618 1770 6284 6429 25953 25953 IGSCTQQDVELHVQK 15 1 0 Unmodified _IGSCTQQDVELHVQK_ 0 0 0 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85;C9JQM9;H7C278 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.2954 3 581.289437 1740.84648 81054.99 0.95165 0.00055318 -0.64711 -0.00037616 0.30454 0.00017702 581.623423381178 583.960537804278 39.669 0.39481 39.669 39.519 39.914 0 126 32 8 0 0 0 1.9215E-05 1 21052 70.197 58.051 1 1.1112 1.1201 0 28025000 12022000 16003000 16619 610 6285 6430 25954 25954 IGSCTQQDVELHVQK 15 1 0 Unmodified _IGSCTQQDVELHVQK_ 0 0 0 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85;C9JQM9;H7C278 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.2889 3 581.289437 1740.84648 80137.74 0.12668 7.3641E-05 -0.99488 -0.00057831 -0.8682 -0.00050467 581.289588785769 584.292340662416 47.704 0.40023 47.704 47.477 47.877 0 117 28 6 0 0 0 0.026325 1 22607 15.193 10.802 1 0.96748 0.78418 0 2733000 1446200 1286800 16620 610 6285 6430 25955 25955 IGSFAEPSSVSFSSK 15 1 0 Unmodified _IGSFAEPSSVSFSSK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.3771 2 765.377746 1528.74094 70996.16 0.91007 0.00069655 -0.1441 -0.00011029 0.76598 0.00058626 765.87954695129 769.384845741681 80.13 0.49728 80.13 80.009 80.506 0 182 41 7 0 0 0 0.00021929 2 47578 84.169 84.169 1 0.91109 0.96146 0 30919000 13841000 17079000 16621 1680 6286 6431 25956;25957 25957 IGSFAEPSSVSFSSK 15 1 0 Unmodified _IGSFAEPSSVSFSSK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.881 2 765.377746 1528.74094 70637.4 0.69397 0.00053115 -0.12178 -9.3205E-05 0.5722 0.00043795 765.377379607971 769.384811659326 79.257 0.52701 79.257 79.021 79.548 0 209 43 8 0 0 0 0.0026551 2 48035 63.908 63.908 1 0.87266 0.90887 0 24494000 11846000 12648000 16622 1680 6286 6431 25958;25959 25958 IGSFAEPSSVSFSSK 15 1 0 Unmodified _IGSFAEPSSVSFSSK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.3784 2 765.377746 1528.74094 68098.52 0.6112 0.0004678 0.044314 3.3917E-05 0.65552 0.00050172 765.377701228934 769.38501202861 91.812 0.69035 91.812 91.543 92.234 0 223 40 9 0 0 0 0.023151 1 50218 30.023 25.869 1 2.1058 1.7259 0 8744900 2639300 6105600 16623 1680 6286 6431 25960 25960 IGSLASGNVR 10 0 1 Unmodified _IGSLASGNVR_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.2749 2 487.274898 972.535243 87404.76 0.41176 0.00020064 0.062334 3.0374E-05 0.47409 0.00023101 487.274934401451 492.278978138741 32.032 0.62926 32.032 31.672 32.301 0 259 61 6 0 0 0 0.0026273 2 15751 68.224 24.416 1 0.68041 0.72705 0 44789000 27716000 17073000 16624 878 6287 6432 25961;25962 25962 IGSLASGNVR 10 0 1 Unmodified _IGSLASGNVR_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2789 2 487.274898 972.535243 87222.77 0.28331 0.00013805 -0.52852 -0.00025753 -0.24521 -0.00011949 487.274634947837 492.278653846772 31.326 0.4627 31.326 31.134 31.596 -1.9073E-06 175 40 6 0 0 0 3.5718E-05 1 15432 99.442 35.877 1 0.74141 0.85011 0 82068000 47806000 34262000 16625 878 6287 6432 25963 25963 IGSLIDVNQSK 11 1 0 Unmodified _IGSLIDVNQSK_ 0 0 0 F5H6P7;A0A023T6R1;P61326;Q96A72 F5H6P7 F5H6P7 MAGOHB;FLJ10292;MAGOH Protein mago nashi homolog;Protein mago nashi homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.3348 2 587.327328 1172.6401 78748.58 0.31368 0.00018423 -0.0050538 -2.9682E-06 0.30862 0.00018126 587.327487056007 591.33434185916 62.068 0.58451 62.068 61.866 62.451 0 209 49 6 0 0 0 0.00034828 2 35535 85.533 54.111 1 1.9048 2.0479 0 32888000 12525000 20362000 16626 3 6288 6433 25964;25965 25964 IGSLIDVNQSK 11 1 0 Unmodified _IGSLIDVNQSK_ 0 0 0 F5H6P7;A0A023T6R1;P61326;Q96A72 F5H6P7 F5H6P7 MAGOHB;FLJ10292;MAGOH Protein mago nashi homolog;Protein mago nashi homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.334 2 587.327328 1172.6401 80383.71 0.4423 0.00025978 -0.51152 -0.00030043 -0.06922 -4.0655E-05 587.327630558145 591.33398211404 60.898 0.904 60.898 60.409 61.313 0 234 79 5 0 0 0 7.9598E-08 1 35599 112.71 82.457 1 1.955 2.1191 0 38963000 15409000 23554000 16627 3 6288 6433 25966 25966 IGSLIDVNQSK 11 1 0 Unmodified _IGSLIDVNQSK_ 0 0 0 F5H6P7;A0A023T6R1;P61326;Q96A72 F5H6P7 F5H6P7 MAGOHB;FLJ10292;MAGOH Protein mago nashi homolog;Protein mago nashi homolog 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 591.3352 2 587.327328 1172.6401 79855.44 0.043064 2.5293E-05 0.60198 0.00035356 0.64505 0.00037885 587.327536950155 591.334712898373 71.633 0.3503 71.633 71.471 71.821 0 89 22 6 0 0 0 0.007905 1 36968 51.762 33.537 1 1.2846 1.0019 0 3628400 1734100 1894300 16628 3 6288 6433 25967 25967 IGTFDLK 7 1 0 Unmodified _IGTFDLK_ 0 0 0 Q14739;A0A024R3R5 Q14739 Q14739 LBR Lamin-B receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.2266 2 397.226354 792.438155 96710.73 -0.16067 -6.3821E-05 -0.055492 -2.2043E-05 -0.21616 -8.5864E-05 397.225881783566 401.233482384379 62.044 0.73022 62.044 61.794 62.524 -3.8147E-06 159 62 5 0 0 0 0.027156 2 35569 73.975 22.512 1 1.3228 1.4252 0 33775000 15220000 18554000 16629 1743 6289 6434 25968;25969 25969 IGTFDLK 7 1 0 Unmodified _IGTFDLK_ 0 0 0 Q14739;A0A024R3R5 Q14739 Q14739 LBR Lamin-B receptor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.2331 2 397.226354 792.438155 NaN NaN NaN 0.19288 7.6616E-05 NaN NaN NaN NaN 60.627 0.69067 60.627 60.55 61.24 0 0 0 0 0.049435 1 35504 58.604 12.253 1 NaN NaN 0 13721000 0 13721000 16630 1743 6289 6434 25970 25970 IGTSTSFDSGIAGLSSISQCTSSSQLDETSHR 32 0 1 Unmodified _IGTSTSFDSGIAGLSSISQCTSSSQLDETSHR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1106.8466 3 1106.17931 3315.51611 58027.34 0.2822 0.00031216 0.054351 6.0122E-05 0.33655 0.00037229 1106.51458139795 1109.84948648709 101.67 0.55345 101.67 101.46 102.01 7.6294E-06 313 43 10 0 0 0 8.564E-08 2 62495 41.933 41.933 1 0.65103 0.67459 0 22937000 14456000 8480700 16631 1421 6290 6435 25971;25972 25971 IGTSTSFDSGIAGLSSISQCTSSSQLDETSHR 32 0 1 Unmodified _IGTSTSFDSGIAGLSSISQCTSSSQLDETSHR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1109.8499 3 1106.17931 3315.51611 58196.78 0.065722 7.27E-05 0.16828 0.00018615 0.234 0.00025885 1106.5146599105 1109.84954717533 101.05 0.5378 101.05 100.8 101.34 0 274 41 9 0 0 0 1.5271E-12 2 63482 54.003 54.003 1 0.68746 0.75308 0 31604000 17222000 14382000 16632 1421 6290 6435 25973;25974 25973 IGTSTSFDSGIAGLSSISQCTSSSQLDETSHR 32 0 1 Unmodified _IGTSTSFDSGIAGLSSISQCTSSSQLDETSHR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1109.8497 3 1106.17931 3315.51611 57216.3 0.51692 0.00057181 -0.2726 -0.00030155 0.24432 0.00027026 1106.51345957975 1109.84963504174 113.7 0.7709 113.7 113.46 114.23 -7.6294E-06 284 34 14 0 0 0 5.2051E-31 2 66176 94.495 94.495 1 1.3009 1.1191 0 49899000 21167000 28733000 16633 1421 6290 6435 25975;25976 25975 IGTSTSFDSGIAGLSSISQCTSSSQLDETSHR 32 0 1 Unmodified _IGTSTSFDSGIAGLSSISQCTSSSQLDETSHR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1106.5118 3 1106.17931 3315.51611 57383.81 0.17551 0.00019414 -0.33676 -0.00037251 -0.16125 -0.00017837 1106.51346589583 1109.84953576961 113.56 0.62367 113.56 113.35 113.98 0 288 29 16 0 0 0 5.8894E-08 2 65185 44.31 44.31 1 1.3428 1.1717 0 60447000 24182000 36264000 16634 1421 6290 6435 25977;25978 25977 IGTTPDIILDDLLETDR 17 0 1 Unmodified _IGTTPDIILDDLLETDR_ 0 0 0 D3DWL9;Q10570;A0A087X101;Q9C0J6 D3DWL9 D3DWL9 CPSF1;P/cl.18 Cleavage and polyadenylation specificity factor subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 955.5071 2 950.49912 1898.98369 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.04 1 133.04 132.54 133.54 0 0 0 0 0.054061 1 89226 36.847 21.971 1 16635 1198 6291 6436 25979 25979 IGTVSIFHMSDSYSETPLEDFVPQK 25 1 0 Unmodified _IGTVSIFHMSDSYSETPLEDFVPQK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 946.1268 3 943.121347 2826.34221 63744.54 1.0068 0.00094958 -0.36112 -0.00034058 0.64572 0.00060899 943.455496575025 946.126946865193 133.07 0.43123 133.07 132.89 133.32 0 118 20 9 0 0 0 0.023559 1 81004 17.216 17.216 1 1.8025 1.4235 0 6031300 2409400 3621900 16636 1741 6292 6437 25980 25980 IGVDLIMK 8 1 0 Oxidation (M) _IGVDLIM(ox)K_ IGVDLIM(1)K IGVDLIM(69.2)K 0 1 0 B4DMT5;B3KSH1;O00303;B4DEW9 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.7699 2 452.762246 903.50994 89551.73 0.13759 6.2295E-05 0.13404 6.069E-05 0.27163 0.00012299 452.762034614969 456.769436003826 72.678 0.23554 72.678 72.544 72.78 0 48 15 4 0 0 0 0.0056946 1 42578 69.198 36.892 1 2.3011 2.3433 0 14192000 3835600 10356000 16637 939 6293 6438 25981 25981 768 IGVDLIMK 8 1 0 Oxidation (M) _IGVDLIM(ox)K_ IGVDLIM(1)K IGVDLIM(75.11)K 0 1 0 B4DMT5;B3KSH1;O00303;B4DEW9 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.7692 2 452.762246 903.50994 NaN NaN NaN 0.39583 0.00017922 NaN NaN NaN NaN 71.35 0.25261 71.35 71.225 71.478 0 0 0 0 0.0035901 1 42745 75.109 42.804 1 NaN NaN 0 12808000 0 12808000 16638 939 6293 6438 25982 25982 768 IGVITNR 7 0 1 Unmodified _IGVITNR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 386.7372 2 386.73742 771.460287 91901.84 0.43472 0.00016812 0.23401 9.0502E-05 0.66873 0.00025862 386.737423911936 391.741482052481 31.09 1.128 31.09 30.94 32.067 0 438 106 8 0 0 0 0.010057 2 15266 118.01 55.296 1 1.1041 1.3086 0 513650000 221970000 291680000 16639 824 6294 6439 25983;25984 25984 IGVITNR 7 0 1 Unmodified _IGVITNR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 386.7375 2 386.73742 771.460287 96145.21 0.06258 2.4202E-05 0.24743 9.5692E-05 0.31001 0.00011989 386.737437776627 391.741510748856 30.504 1.2918 30.504 30.285 31.577 1.9073E-06 413 110 6 0 0 0 0.0076797 3 14943 128.82 64.039 1 1.1084 1.2938 0 532800000 228340000 304460000 16640 824 6294 6439 25985;25986;25987 25986 IGVITNR 7 0 1 Unmodified _IGVITNR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 391.7417 2 386.73742 771.460287 95141.57 0.21528 8.3256E-05 -0.2422 -9.3669E-05 -0.026926 -1.0413E-05 386.737300968824 391.74134749879 34.701 0.59502 34.701 34.467 35.062 0 271 46 8 0 0 0 0.03754 1 14815 60.799 21.963 1 0.9855 0.86016 0 85740000 43462000 42278000 16641 824 6294 6439 25988 25988 IGVLDEGK 8 1 0 Unmodified _IGVLDEGK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.7346 2 415.734543 829.454533 92692.95 0.47421 0.00019714 -0.07374 -3.0656E-05 0.40047 0.00016649 415.734519282839 419.741442863277 41.267 1.4434 41.267 40.764 42.207 -3.8147E-06 482 118 8 0 0 0 0.0049843 1 21533 91.9 27.143 1 0.92585 1.1012 0 592170000 304760000 287420000 16642 157 6295 6440 25989 25989 IGVLDEGK 8 1 0 Unmodified _IGVLDEGK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.7345 2 415.734543 829.454533 92180.02 0.3743 0.00015561 -0.37977 -0.00015788 -0.0054727 -2.2752E-06 415.734340663428 419.741369640558 40.267 1.0413 40.267 39.772 40.813 0 517 86 10 0 0 0 0.0087497 2 21304 77.282 27.17 1 0.82241 0.97111 0 1088600000 553100000 535550000 16643 157 6295 6440 25990;25991 25990 IGVMSLIR 8 0 1 Oxidation (M) _IGVM(ox)SLIR_ IGVM(1)SLIR IGVM(40.78)SLIR 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.7722 2 452.767863 903.521173 98958.66 -0.037019 -1.6761E-05 0.77451 0.00035067 0.73749 0.00033391 452.768021177329 457.772366414044 74.772 0.55162 74.772 74.486 75.038 0 105 46 4 0 0 0 0.02817 1 43737 40.778 26.782 1 1.3681 1.4299 0 10679000 3371500 7307400 16644 515 6296 6441 25992 25992 376 IGVMSLIR 8 0 1 Oxidation (M) _IGVM(ox)SLIR_ IGVM(1)SLIR IGVM(79.45)SLIR 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.7672 2 452.767863 903.521173 NaN NaN NaN -0.75348 -0.00034115 NaN NaN NaN NaN 73.009 0.36559 73.009 72.836 73.201 0 0 0 0 0.0027501 1 42781 79.451 51.344 1 NaN NaN 0 5877600 5877600 0 16645 515 6296 6441 25993 25993 376 IGVMSLIR 8 0 1 Oxidation (M) _IGVM(ox)SLIR_ IGVM(1)SLIR IGVM(68.79)SLIR 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.7672 2 452.767863 903.521173 90796.03 -0.15724 -7.1194E-05 -0.4435 -0.0002008 -0.60074 -0.000272 452.767688866893 457.771891795061 71.622 0.39929 71.622 71.378 71.777 -7.6294E-06 108 29 6 0 0 0 0.0057809 2 42903 68.787 41.825 1 1.3246 1.4293 0 26339000 11301000 15038000 16646 515 6296 6441 25994;25995 25995 376 IGVMSLIR 8 0 1 Oxidation (M) _IGVM(ox)SLIR_ IGVM(1)SLIR IGVM(40.07)SLIR 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.2745 2 452.767863 903.521173 NaN NaN NaN 2.0112 0.0009106 NaN NaN NaN NaN 72.835 0.36637 72.835 72.695 73.061 0 0 0 0 0.027678 1 43792 40.067 19.442 1 NaN NaN 0 3288600 0 3288600 16647 515 6296 6441 25996 25996 376 IGVPSATEIIK 11 1 0 Unmodified _IGVPSATEIIK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.3374 2 564.337164 1126.65977 80330.29 0.60269 0.00034012 -0.23863 -0.00013467 0.36406 0.00020545 564.33716177934 568.343977967601 87.876 1.0555 87.876 87.351 88.406 0 463 94 6 0 0 0 0.00022817 3 53142 91.584 43.301 1 1.0846 1.2216 0 123980000 68971000 55008000 16648 2065 6297 6442 25997;25998;25999 25998 IGVPSATEIIK 11 1 0 Unmodified _IGVPSATEIIK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.339 2 564.337164 1126.65977 80647.25 0.43967 0.00024812 -0.18519 -0.00010451 0.25448 0.00014361 564.337173836888 568.34402603316 86.975 0.98214 86.975 86.435 87.417 7.6294E-06 397 83 6 0 0 0 0.0048533 3 53327 57.267 30.266 1 1.0714 1.1994 0 109990000 48842000 61149000 16649 2065 6297 6442 26000;26001;26002 26001 IGVPSATEIIK 11 1 0 Unmodified _IGVPSATEIIK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.3394 2 564.337164 1126.65977 NaN NaN NaN 1.0123 0.00057126 NaN NaN NaN NaN 87.272 0.2879 87.272 87.256 87.544 0 0 0 0 0.0026408 1 53787 72.643 28.835 1 NaN NaN 0 16195000 16195000 0 16650 2065 6297 6442 26003 26003 IGYQVTAMIGHTNVVVPR 18 0 1 Oxidation (M) _IGYQVTAM(ox)IGHTNVVVPR_ IGYQVTAM(1)IGHTNVVVPR IGYQVTAM(40.6)IGHTNVVVPR 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.6871 3 657.687532 1970.04077 NaN NaN NaN 0.97382 0.00064047 NaN NaN NaN NaN 83.096 0.45874 83.096 82.699 83.158 0 0 0 0 0.015126 1 50897 40.602 31.67 1 NaN NaN 0 12457000 12457000 0 16651 878 6298 6443 26004 26004 685 IGYQVTAMIGHTNVVVPR 18 0 1 Unmodified _IGYQVTAMIGHTNVVVPR_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.0269 3 652.355894 1954.04585 NaN NaN NaN -0.42012 -0.00027407 NaN NaN NaN NaN 110.73 0.27335 110.73 110.62 110.89 7.6294E-06 0 0 0 0.052023 1 64078 23.1 19.196 1 NaN NaN 0 1637400 0 1637400 16652 878 6298 6444 26005 26005 IGYQVTAMIGHTNVVVPR 18 0 1 Unmodified _IGYQVTAMIGHTNVVVPR_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.0267 3 652.355894 1954.04585 76934.99 0.77021 0.00050245 -0.24085 -0.00015712 0.52936 0.00034533 652.355783432738 655.691813299673 110.55 0.31112 110.55 110.37 110.69 0 61 16 5 0 0 0 0.056078 1 62994 15.422 15.422 1 2.0193 1.7564 0 2629700 805890 1823800 16653 878 6298 6444 26006 26006 IGYSSPLTLSDQSSK 15 1 0 Unmodified _IGYSSPLTLSDQSSK_ 0 0 0 Q8TAF6;O60488;B4DH39 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.9093 2 791.901585 1581.78862 67784.55 0.56727 0.00044922 0.4504 0.00035667 1.0177 0.00080589 791.901277694074 795.909170621461 78.286 0.51709 78.286 78.039 78.556 7.6294E-06 192 44 6 0 0 0 9.1655E-06 3 46322 93.623 93.623 1 1.9938 1.9627 0 24084000 7875600 16209000 16654 1394 6299 6445 26007;26008;26009 26009 IGYSSPLTLSDQSSK 15 1 0 Unmodified _IGYSSPLTLSDQSSK_ 0 0 0 Q8TAF6;O60488;B4DH39 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.4098 2 791.901585 1581.78862 NaN NaN NaN 0.59634 0.00047224 NaN NaN NaN NaN 77.344 0.48695 77.344 77.106 77.593 0 0 0 0 0.046749 1 46650 37.426 30.537 1 NaN NaN 0 23550000 0 23550000 16655 1394 6299 6445 26010 26010 IGYSSPLTLSDQSSK 15 1 0 Unmodified _IGYSSPLTLSDQSSK_ 0 0 0 Q8TAF6;O60488;B4DH39 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.9036 2 791.901585 1581.78862 NaN NaN NaN -1.0001 -0.000792 NaN NaN NaN NaN 77.333 0.60802 77.333 77.121 77.729 0 0 0 0 0.0018461 3 46697 64.65 48.513 1 NaN NaN 0 12579000 12579000 0 16656 1394 6299 6445 26011;26012;26013 26012 IGYSSPLTLSDQSSK 15 1 0 Unmodified _IGYSSPLTLSDQSSK_ 0 0 0 Q8TAF6;O60488;B4DH39 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 796.4105 2 791.901585 1581.78862 70665.45 0.6607 0.00052321 0.36896 0.00029218 1.0297 0.00081539 792.40345256298 795.908906778355 89.542 0.4686 89.542 89.281 89.75 7.6294E-06 137 30 6 0 0 0 0.023058 1 49504 30.059 30.059 1 1.2214 0.96821 0 4741400 2100200 2641300 16657 1394 6299 6445 26014 26014 IGYSSPLTLSDQSSK 15 1 0 Unmodified _IGYSSPLTLSDQSSK_ 0 0 0 Q8TAF6;O60488;B4DH39 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.4041 2 791.901585 1581.78862 69684.74 0.44904 0.0003556 0.26866 0.00021276 0.71771 0.00056835 791.901592090259 795.908882267541 89.497 0.43439 89.497 89.303 89.738 7.6294E-06 134 27 6 0 0 0 0.0050739 2 48613 37.426 37.426 1 1.2489 1.0044 0 4246100 1670500 2575600 16658 1394 6299 6445 26015;26016 26015 IGYSSPQTLADQSSK 15 1 0 Unmodified _IGYSSPQTLADQSSK_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573;B3KMA6 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.3914 2 791.391384 1580.76822 68190 0.51192 0.00040513 0.34489 0.00027295 0.85682 0.00067808 791.392107195478 795.398679351439 52.645 0.51664 52.645 52.385 52.901 0 196 36 8 0 0 0 5.9182E-06 2 29202 96.067 96.067 1 1.2455 1.3106 0 30624000 14410000 16214000 16659 150 6300 6446 26017;26018 26018 IGYSSPQTLADQSSK 15 1 0 Unmodified _IGYSSPQTLADQSSK_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573;B3KMA6 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.4 2 791.391384 1580.76822 68199.43 0.57576 0.00045565 0.29822 0.00023601 0.87398 0.00069166 791.392248652756 795.398398381047 51.536 0.57694 51.536 51.256 51.833 3.8147E-06 232 46 8 0 0 0 2.4092E-05 1 29069 87.026 79.645 1 1.2646 1.3793 0 40057000 21689000 18368000 16660 150 6300 6446 26019 26019 IGYSSPQTLADQSSK 15 1 0 Unmodified _IGYSSPQTLADQSSK_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573;B3KMA6 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.3916 2 791.391384 1580.76822 68460.23 0.54945 0.00043483 -0.11242 -8.8971E-05 0.43703 0.00034586 791.391250915295 795.398503056068 61.387 0.5247 61.387 61.104 61.629 3.8147E-06 208 43 6 0 0 0 0.014712 1 31387 33.273 33.273 1 1.1443 0.90647 0 4201600 2034300 2167200 16661 150 6300 6446 26020 26020 IGYSSPQTLADQSSK 15 1 0 Unmodified _IGYSSPQTLADQSSK_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573;B3KMA6 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.3918 2 791.391384 1580.76822 67830.48 0.51586 0.00040825 4.4217E-05 3.4993E-08 0.51591 0.00040828 791.391045389125 795.398581672985 62.025 0.57663 62.025 61.773 62.35 0 195 41 7 0 0 0 0.0045179 1 31163 39.006 39.006 1 1.1599 0.93521 0 4292500 1918900 2373700 16662 150 6300 6446 26021 26021 IHAGPITK 8 1 0 Unmodified _IHAGPITK_ 0 0 0 V9HW24;A0A087X2I1;P62333 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.7604 2 418.75307 835.491587 90323.9 0.21284 8.9127E-05 1.2704 0.00053197 1.4832 0.00062109 418.752281883904 422.760515698718 20.454 0.50428 20.454 20.324 20.829 -1.9073E-06 46 15 6 0 0 0 0.0021113 1 6748 102.77 72.27 1 3.4799 3.7117 0 36609000 9824100 26785000 16663 454 6301 6447 26022 26022 IHCLENVDK 9 1 0 Unmodified _IHCLENVDK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1;A4QPE4;B2RMN7;A0A024R674;Q59FP5;P11277;O15020 D6W5C0;O15020 D6W5C0 SPTBN1;SPTBN2;SPTB Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic;Spectrin beta chain, non-erythrocytic 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.2798 2 564.279323 1126.54409 80200.06 0.16981 9.5822E-05 0.36019 0.00020325 0.53 0.00029907 564.279972910367 568.286566533994 22.949 0.31403 22.949 22.77 23.084 1.9073E-06 51 13 6 0 0 0 0.03016 1 8838 45.972 31.765 1 1.4346 1.4534 0 9050300 3934000 5116300 16664 415;1372 6302 6448 26023 26023 IHDPQLLTER 10 0 1 Unmodified _IHDPQLLTER_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;H7BZ35 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.5619 3 407.891055 1220.65134 97424.12 0.096237 3.9254E-05 0.3419 0.00013946 0.43814 0.00017871 407.891169882492 411.22760083421 41.904 0.5074 41.904 41.697 42.204 0 136 46 5 0 0 0 0.0055936 1 22618 47.559 35.693 1 1.1474 1.1876 0 21744000 9291700 12453000 16665 610 6303 6449 26024 26024 IHDPQLLTER 10 0 1 Unmodified _IHDPQLLTER_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;H7BZ35 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.3364 2 611.332944 1220.65134 NaN NaN NaN 0.33545 0.00020507 NaN NaN NaN NaN 41.902 0.48745 41.902 41.697 42.184 0 0 0 0 0.052973 1 22555 45.997 18.172 1 NaN NaN 0 6825100 0 6825100 16666 610 6303 6449 26025 26025 IHETIESINQLK 12 1 0 Unmodified _IHETIESINQLK_ 0 0 0 J3KMX2;B9EGA3;Q92925 J3KMX2 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.8898 2 712.890823 1423.76709 NaN NaN NaN -0.032185 -2.2944E-05 NaN NaN NaN NaN 56.144 0.20362 56.144 56.028 56.231 0 0 0 0 0.028718 1 32306 48.028 28.757 1 NaN NaN 0 4833800 4833800 0 16667 1120 6304 6450 26026 26026 IHFFLSK 7 1 0 Unmodified _IHFFLSK_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2577 2 446.257988 890.501424 90843.88 -0.0082357 -3.6752E-06 0.091944 4.1031E-05 0.083708 3.7356E-05 446.25792055558 450.265022601408 69.583 2.9017 69.583 68.476 71.378 0 988 250 8 0 0 0 0.026682 4 40406 92.467 63.53 1 0.677 0.78145 0 220200000 136510000 83690000 16668 1546;1018 6305 6451 26027;26028;26029;26030 26028 IHFFLSK 7 1 0 Unmodified _IHFFLSK_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.2653 2 446.257988 890.501424 89828.07 -0.12404 -5.5352E-05 0.3068 0.00013691 0.18276 8.1559E-05 446.258038680374 450.265082064333 65.045 0.74344 65.045 64.745 65.488 0 267 59 7 0 0 0 0.026758 2 38273 85.357 55.287 1 0.75519 0.84462 0 85881000 48682000 37199000 16669 1546;1018 6305 6451 26031;26032 26031 IHFFLSK 7 1 0 Unmodified _IHFFLSK_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.2579 2 446.257988 890.501424 89828.05 0.0049834 2.2239E-06 0.12457 5.5591E-05 0.12955 5.7815E-05 446.257904618355 450.265026605432 66.228 2.2238 66.228 65.3 67.523 0 900 186 7 0 0 0 0.0099339 5 39285 114.19 69.383 1 0.64947 0.73739 0 141640000 87849000 53787000 16670 1546;1018 6305 6451 26033;26034;26035;26036;26037 26036 IHFFLSK 7 1 0 Unmodified _IHFFLSK_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 446.2582 2 446.257988 890.501424 90763.05 0.0053366 2.3815E-06 0.13228 5.903E-05 0.13762 6.1412E-05 446.257962491787 450.264999154858 76.163 2.6545 76.163 75.794 78.448 0 904 181 8 0 0 0 0.010262 4 40565 124.37 72.565 1 0.85606 0.73257 0 71583000 37880000 33703000 16671 1546;1018 6305 6451 26038;26039;26040;26041 26039 IHFFLSK 7 1 0 Unmodified _IHFFLSK_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 446.2578 2 446.257988 890.501424 89605.44 -0.039898 -1.7805E-05 0.090249 4.0274E-05 0.050351 2.2469E-05 446.257948879551 450.26500218866 76.068 2.6896 76.068 75.571 78.261 0 664 181 8 0 0 0 0.014183 4 39619 100.74 60.38 1 0.84588 0.71233 0 52785000 28915000 23869000 16672 1546;1018 6305 6451 26042;26043;26044;26045 26043 IHFGQITSNQMLVPVIEK 18 1 0 Oxidation (M) _IHFGQITSNQM(ox)LVPVIEK_ IHFGQITSNQM(1)LVPVIEK IHFGQITSNQM(56.82)LVPVIEK 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.7128 3 690.706592 2069.09795 72824.96 0.81196 0.00056083 -0.36841 -0.00025447 0.44355 0.00030636 690.706974665031 693.378265152676 101.03 1.2705 101.03 100.64 101.92 0 423 95 8 0 0 0 1.3693E-05 2 61936 56.817 56.817 1 1.1528 1.2401 0 38593000 17729000 20864000 16673 1827 6306 6452 26046;26047 26046 1684 IHFGQITSNQMLVPVIEK 18 1 0 Oxidation (M) _IHFGQITSNQM(ox)LVPVIEK_ IHFGQITSNQM(1)LVPVIEK IHFGQITSNQM(54.76)LVPVIEK 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.0412 3 690.706592 2069.09795 72914.84 0.7238 0.00049993 -0.051532 -3.5593E-05 0.67226 0.00046434 691.041034237526 693.712203162079 99.659 1.1936 99.659 99.183 100.38 0 569 96 9 0 0 0 1.5401E-05 2 62419 54.764 54.764 1 1.3225 1.4579 0 43518000 17463000 26055000 16674 1827 6306 6452 26048;26049 26048 1684 IHFGQITSNQMLVPVIEK 18 1 0 Unmodified _IHFGQITSNQMLVPVIEK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.3817 3 685.374954 2053.10303 73863.68 0.56832 0.00038951 0.26489 0.00018155 0.83321 0.00057106 685.709607676334 688.382093671116 120.17 0.58781 120.17 119.85 120.44 0 109 25 8 0 0 0 0.0047899 2 71311 24.594 24.594 1 2.5677 2.0529 0 8913200 2532300 6380900 16675 1827 6306 6453 26050;26051 26050 IHFPDFSTR 9 0 1 Unmodified _IHFPDFSTR_ 0 0 0 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 377.1936 3 373.857574 1118.55089 100161.6 0.22069 8.2507E-05 -0.20687 -7.7341E-05 0.01382 5.1666E-06 373.857456117097 377.193506139853 76.088 0.68941 76.088 75.752 76.442 0 156 56 4 0 0 0 0.003337 1 44718 49.715 37.668 1 1.0627 1.102 0 13680000 5946500 7733700 16676 1407 6307 6454 26052 26052 IHFPDFSTR 9 0 1 Unmodified _IHFPDFSTR_ 0 0 0 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.8573 3 373.857574 1118.55089 99990.83 0.19428 7.2634E-05 -0.39519 -0.00014774 -0.20091 -7.511E-05 373.857334385937 377.193478935019 74.125 0.74718 74.125 73.85 74.597 0 252 62 6 0 0 0 0.0052991 2 44466 46.158 36.377 1 1.1594 1.1648 0 19171000 8754000 10417000 16677 1407 6307 6454 26053;26054 26053 IHFPDFSTR 9 0 1 Unmodified _IHFPDFSTR_ 0 0 0 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 373.8573 3 373.857574 1118.55089 98164.23 0.10766 4.0249E-05 -0.2905 -0.00010861 -0.18284 -6.8356E-05 373.857387572771 377.19342072066 85.597 0.53569 85.597 85.389 85.925 0 139 33 7 0 0 0 0.047738 2 46846 18.672 18.672 1 1.7059 1.4569 0 5732700 2425800 3306900 16678 1407 6307 6454 26055;26056 26056 IHFPDFSTR 9 0 1 Unmodified _IHFPDFSTR_ 0 0 0 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.2875 2 560.282723 1118.55089 81322.48 0.62463 0.00034997 0.44319 0.00024831 1.0678 0.00059828 560.28284017052 565.287029408917 85.527 0.50134 85.527 85.307 85.808 7.6294E-06 87 30 4 0 0 0 0.039815 1 45888 42.109 38.363 1 1.7971 1.5758 0 4178000 1415300 2762700 16679 1407 6307 6454 26057 26057 IHFPLATYAPVISAEK 16 1 0 Unmodified _IHFPLATYAPVISAEK_ 0 0 0 B3KT06;B3KPS3;P68363;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.9977 3 586.325929 1755.95596 78517.45 0.93112 0.00054594 0.036196 2.1223E-05 0.96731 0.00056716 586.660424203981 588.997338189116 108.72 2.2398 108.72 108.09 110.33 0 1043 158 12 0 0 0 3.9116E-09 5 68149 80.632 80.632 1 1.5002 1.7917 0 775770000 319780000 455990000 16680 922;1257;1659;1869 6308 6455 26058;26059;26060;26061;26062 26060 IHFPLATYAPVISAEK 16 1 0 Unmodified _IHFPLATYAPVISAEK_ 0 0 0 B3KT06;B3KPS3;P68363;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 882.9938 2 878.985255 1755.95596 64751.64 0.93898 0.00082535 0.14573 0.0001281 1.0847 0.00095345 878.985412620218 882.992411768348 108.71 1.0846 108.71 108.28 109.36 0 519 73 9 0 0 0 2.1452E-18 5 68240 136.93 136.93 1 1.5142 1.7147 0 153670000 61048000 92618000 16681 922;1257;1659;1869 6308 6455 26063;26064;26065;26066;26067 26065 IHFPLATYAPVISAEK 16 1 0 Unmodified _IHFPLATYAPVISAEK_ 0 0 0 B3KT06;B3KPS3;P68363;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.9975 3 586.325929 1755.95596 78461.91 0.76847 0.00045057 0.11059 6.4842E-05 0.87906 0.00051542 586.326111571529 588.997185182351 107.58 2.2873 107.58 106.9 109.19 -7.6294E-06 1125 162 12 0 0 0 1.5413E-12 5 68840 93.237 93.237 1 1.502 1.7697 0 571480000 231680000 339790000 16682 922;1257;1659;1869 6308 6455 26068;26069;26070;26071;26072 26070 IHFPLATYAPVISAEK 16 1 0 Unmodified _IHFPLATYAPVISAEK_ 0 0 0 B3KT06;B3KPS3;P68363;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.9931 2 878.985255 1755.95596 64983.93 0.66381 0.00058348 -0.012553 -1.1033E-05 0.65126 0.00057245 879.486590817568 882.992303021594 107.58 1.3277 107.58 107.01 108.34 0 628 93 10 0 0 0 9.847E-09 4 68942 107.09 107.09 1 1.5438 1.726 0 105730000 43508000 62225000 16683 922;1257;1659;1869 6308 6455 26073;26074;26075;26076 26075 IHFPLATYAPVISAEK 16 1 0 Unmodified _IHFPLATYAPVISAEK_ 0 0 0 B3KT06;B3KPS3;P68363;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.3321 3 586.325929 1755.95596 78549.59 0.75801 0.00044444 0.29742 0.00017439 1.0554 0.00061882 586.326139562869 588.997314567519 118.37 1.6173 118.37 117.95 119.56 7.6294E-06 498 71 12 0 0 0 4.6602E-05 5 69655 45.438 45.438 1 1.2239 1.054 0 94298000 41765000 52533000 16684 922;1257;1659;1869 6308 6455 26077;26078;26079;26080;26081 26078 IHFPLATYAPVISAEK 16 1 0 Unmodified _IHFPLATYAPVISAEK_ 0 0 0 B3KT06;B3KPS3;P68363;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 882.9933 2 878.985255 1755.95596 65574.83 0.74024 0.00065066 -0.023694 -2.0827E-05 0.71654 0.00062983 878.985276640691 882.992484673149 118.37 0.85521 118.37 117.98 118.83 0 233 38 10 0 0 0 0.00020674 3 69811 59.57 59.57 1 1.2211 0.95821 0 16890000 7406100 9484100 16685 922;1257;1659;1869 6308 6455 26082;26083;26084 26084 IHFPLATYAPVISAEK 16 1 0 Unmodified _IHFPLATYAPVISAEK_ 0 0 0 B3KT06;B3KPS3;P68363;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.9974 3 586.325929 1755.95596 78381.76 0.52738 0.00030922 0.20124 0.00011799 0.72862 0.00042721 586.326069705591 588.997258421145 118.07 1.6157 118.07 117.62 119.23 0 526 74 12 0 0 0 7.2195E-05 5 69121 40.857 40.857 1 1.2258 1.0432 0 82493000 37311000 45182000 16686 922;1257;1659;1869 6308 6455 26085;26086;26087;26088;26089 26087 IHFPLATYAPVISAEK 16 1 0 Unmodified _IHFPLATYAPVISAEK_ 0 0 0 B3KT06;B3KPS3;P68363;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 879.4872 2 878.985255 1755.95596 65668.32 0.25715 0.00022603 0.17222 0.00015138 0.42937 0.00037741 879.486581367835 883.494000436756 118.04 0.81591 118.04 117.73 118.54 0 237 37 9 0 0 0 0.00034242 3 68661 53.252 53.252 1 1.2011 0.96492 0 15859000 7032900 8825900 16687 922;1257;1659;1869 6308 6455 26090;26091;26092 26091 IHGSPLQK 8 1 0 Unmodified _IHGSPLQK_ 0 0 0 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 440.2559 2 440.255977 878.497401 89969.01 -0.51088 -0.00022492 0.41557 0.00018296 -0.095318 -4.1965E-05 440.256215817283 444.263100748571 19.393 0.19884 19.393 19.279 19.478 0 33 6 7 0 0 0 0.00095807 1 5126 123.69 77.319 1 1.1849 0.95403 0 22052000 10195000 11858000 16688 924 6309 6456 26093 26093 IHGSPLQK 8 1 0 Unmodified _IHGSPLQK_ 0 0 0 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 444.2631 2 440.255977 878.497401 90690.05 -0.38321 -0.00016871 0.20871 9.1887E-05 -0.1745 -7.6825E-05 440.25606603362 444.26303826828 19.246 0.31865 19.246 19.009 19.328 0 55 16 8 0 0 0 0.0062953 2 4566 87.754 67.199 1 1.379 1.1306 0 5064200 2261800 2802400 16689 924 6309 6456 26094;26095 26095 IHGTEEGQQILK 12 1 0 Unmodified _IHGTEEGQQILK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;F5GWK2;F5H073;F5H068;F5H7R5;F5H4Y4;F5GWA2;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.8697 2 676.862066 1351.70958 75285.76 0.56899 0.00038513 0.0059414 4.0215E-06 0.57493 0.00038915 677.363393668654 680.869326837445 31.849 0.50097 31.849 31.527 32.028 0 165 47 5 0 0 0 1.0737E-17 4 15686 139.15 124.48 1 0.841 0.82871 0 19556000 11727000 7829200 16690 186;1747;718 6310 6457 26096;26097;26098;26099 26098 IHGTEEGQQILK 12 1 0 Unmodified _IHGTEEGQQILK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;F5GWK2;F5H073;F5H068;F5H7R5;F5H4Y4;F5GWA2;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.8704 2 676.862066 1351.70958 75769.02 0.33805 0.00022881 0.34025 0.0002303 0.6783 0.00045911 676.862146471687 680.869508855666 30.528 0.50791 30.528 30.211 30.719 0 117 41 5 0 0 0 5.4379E-06 2 14972 110.18 91.399 1 0.90052 0.93636 0 18959000 11431000 7527700 16691 186;1747;718 6310 6457 26100;26101 26101 IHGTEEGQQILK 12 1 0 Unmodified _IHGTEEGQQILK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;F5GWK2;F5H073;F5H068;F5H7R5;F5H4Y4;F5GWA2;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.5779 3 451.577136 1351.70958 92608.63 -0.11294 -5.0999E-05 -0.080692 -3.6439E-05 -0.19363 -8.7438E-05 451.577517399641 454.248118408951 30.513 0.57319 30.513 30.133 30.707 -1.9073E-06 108 47 4 0 0 0 0.00029247 1 14967 44.82 35.865 1 0.98522 0.9878 0 15840000 7947600 7892400 16692 186;1747;718 6310 6457 26102 26102 IHGTEEGQQILK 12 1 0 Unmodified _IHGTEEGQQILK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;F5GWK2;F5H073;F5H068;F5H7R5;F5H4Y4;F5GWA2;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.7858 2 676.862066 1351.70958 75339.07 0.33605 0.00022746 0.10272 6.953E-05 0.43877 0.00029699 676.862174583701 680.869185280297 36.065 0.71761 36.065 35.69 36.408 0 240 59 6 0 0 0 0.0057197 1 16237 86.879 86.879 1 1.7473 1.3857 0 4399400 1888200 2511200 16693 186;1747;718 6310 6457 26103 26103 IHGTEEGQQILK 12 1 0 Unmodified _IHGTEEGQQILK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;F5GWK2;F5H073;F5H068;F5H7R5;F5H4Y4;F5GWA2;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.8697 2 676.862066 1351.70958 75886.13 0.63416 0.00042924 -0.3552 -0.00024042 0.27896 0.00018882 676.861764003403 680.868995796623 35.917 0.6059 35.917 35.572 36.178 0 214 51 6 0 0 0 0.0024379 1 15500 58.592 58.592 1 1.5017 1.2123 0 4315300 1692900 2622400 16694 186;1747;718 6310 6457 26104 26104 IHGVGFK 7 1 0 Unmodified _IHGVGFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 383.2285 2 379.221406 756.428259 94961.07 -0.0085064 -3.2258E-06 -0.28273 -0.00010722 -0.29123 -0.00011044 379.221305099781 383.228342268171 25.451 0.74693 25.451 25.236 25.982 0 236 40 9 0 0 0 0.016852 2 10982 97.64 55.923 1 0.85588 1.022 0 766270000 411960000 354300000 16695 825 6311 6458 26105;26106 26105 IHGVGFK 7 1 0 Unmodified _IHGVGFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.2214 2 379.221406 756.428259 94353.26 0.32085 0.00012167 -0.57294 -0.00021727 -0.25209 -9.5599E-05 379.221152881339 383.228272553901 24.803 0.86212 24.803 24.655 25.517 0 173 35 8 0 0 0 0.019549 2 10450 94.95 47.906 1 0.89156 1.0532 0 1240300000 642480000 597830000 16696 825 6311 6458 26107;26108 26108 IHGVGFK 7 1 0 Unmodified _IHGVGFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.3413 1 757.435535 756.428259 69072.8 0.74065 0.000561 0.56656 0.00042913 1.3072 0.00099013 757.435738142771 765.450008129481 24.803 0.24697 24.803 24.716 24.963 0 48 10 6 0 0 0 0.052983 1 10418 98.03 59.828 1 0.81238 0.90784 0 95218000 51997000 43221000 16697 825 6311 6458 26109 26109 IHGVGFK 7 1 0 Unmodified _IHGVGFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 383.2286 2 379.221406 756.428259 93716.53 0.17454 6.6191E-05 -0.028222 -1.0702E-05 0.14632 5.5488E-05 379.221410862153 383.22832932258 27.66 1.1695 27.66 27.423 28.593 1.9073E-06 185 52 8 0 0 0 0.026742 2 10771 77.72 45.951 1 0.82123 0.69225 0 55767000 30383000 25384000 16698 825 6311 6458 26110;26111 26110 IHGVGFK 7 1 0 Unmodified _IHGVGFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 379.2213 2 379.221406 756.428259 95614.51 -0.21882 -8.2981E-05 0.25037 9.4945E-05 0.03155 1.1964E-05 379.221449579233 383.228472375989 27.347 1.2427 27.347 27.044 28.287 -1.9073E-06 189 52 8 0 0 0 0.02665 2 10054 75.131 32.566 1 0.84241 0.70603 0 46895000 24778000 22117000 16699 825 6311 6458 26112;26113 26113 IHIDLPNEQAR 11 0 1 Unmodified _IHIDLPNEQAR_ 0 0 0 V9HW24;A0A087X2I1;P62333 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 439.2399 3 435.901843 1304.6837 96289.95 0.28071 0.00012236 0.71164 0.0003102 0.99235 0.00043257 435.90214415745 439.238455654131 60.503 0.37015 60.503 60.32 60.69 3.8147E-06 69 35 4 0 0 0 0.0064719 1 34487 43.477 43.477 1 2.2518 2.2515 0 8894800 3503100 5391700 16700 454 6312 6459 26114 26114 IHIDLPNEQAR 11 0 1 Unmodified _IHIDLPNEQAR_ 0 0 0 V9HW24;A0A087X2I1;P62333 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.3553 2 653.349126 1304.6837 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.539 1 60.539 60.039 61.039 -3.8147E-06 0 0 0 0.00059709 1 34553 73.985 39.177 1 16701 454 6312 6459 26115 26115 IHNAENIQPGEQK 13 1 0 Unmodified _IHNAENIQPGEQK_ 0 0 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;C9J6B6;C9K073;C9J2Z7 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.9221 3 493.251311 1476.73211 86988.06 0.33877 0.0001671 0.19443 9.5903E-05 0.5332 0.000263 493.251237244457 495.92254739473 19.238 0.31995 19.238 19.009 19.329 0 62 20 8 0 0 0 6.8831E-05 2 5925 69.352 69.352 1 2.4474 2.6054 0 31829000 10216000 21613000 16702 896 6313 6460 26116;26117 26116 IHNAENIQPGEQK 13 1 0 Unmodified _IHNAENIQPGEQK_ 0 0 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;C9J6B6;C9K073;C9J2Z7 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.3729 2 739.373329 1476.73211 NaN NaN NaN -0.35555 -0.00026289 NaN NaN NaN NaN 19.239 0.14885 19.239 19.153 19.302 0 0 0 0 5.8231E-29 1 5916 145.09 113.15 1 NaN NaN 0 5431400 5431400 0 16703 896 6313 6460 26118 26118 IHNAENIQPGEQK 13 1 0 Unmodified _IHNAENIQPGEQK_ 0 0 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;C9J6B6;C9K073;C9J2Z7 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.9261 3 493.251311 1476.73211 83403.84 -0.05773 -2.8475E-05 1.3823 0.00068183 1.3246 0.00065335 493.251479953716 495.923743046921 19.144 0.22641 19.144 19.025 19.252 0 32 9 6 0 0 0 4.3255E-05 1 5601 82.069 74.288 1 2.0763 2.1288 0 31944000 9434800 22509000 16704 896 6313 6460 26119 26119 IHNAENIQPGEQK 13 1 0 Unmodified _IHNAENIQPGEQK_ 0 0 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;C9J6B6;C9K073;C9J2Z7 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.3738 2 739.373329 1476.73211 NaN NaN NaN 0.26919 0.00019903 NaN NaN NaN NaN 19.149 0.15465 19.149 19.07 19.225 0 0 0 0 4.069E-141 1 5629 245.58 203.48 1 NaN NaN 0 9091300 9091300 0 16705 896 6313 6460 26120 26120 IHNIDIPTTQQVPHIEALLK 20 1 0 Unmodified _IHNIDIPTTQQVPHIEALLK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.0779 4 570.823218 2279.26377 78093.91 0.70229 0.00040088 -0.15722 -8.9745E-05 0.54507 0.00031114 571.07389250108 573.077614463892 115.73 0.48993 115.73 115.45 115.94 0 70 22 8 0 0 0 1.1245E-05 1 66903 50.425 50.425 1 2.654 2.1675 0 8070400 3031500 5038900 16706 684 6314 6461 26121 26121 IHNQNNEQAWK 11 1 0 Unmodified _IHNQNNEQAWK_ 0 0 0 A0A024RBY9;P53701;Q68D50 A0A024RBY9 A0A024RBY9 HCCS;DKFZp779I1858 Cytochrome c-type heme lyase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3361 2 691.334007 1380.65346 73176.88 0.66101 0.00045698 0.23079 0.00015955 0.89181 0.00061654 691.334321437804 695.340759057972 18.406 0.21458 18.406 18.261 18.476 0 27 9 5 0 0 0 4.4461E-10 1 5327 130.98 112.54 1 0.60377 0.60374 0 7735500 4741700 2993900 16707 350 6315 6462 26122 26122 IHPLVR 6 0 1 Unmodified _IHPLVR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 367.7373 2 367.737223 733.459893 98398.99 0.11217 4.1247E-05 0.015717 5.7798E-06 0.12788 4.7027E-05 367.73715126782 372.741223225659 24.697 0.88159 24.697 24.469 25.351 -1.9073E-06 183 45 8 0 0 0 0.057166 1 8789 70.49 17.9 1 1.808 1.4756 0 14585000 5286200 9299300 16708 168 6316 6463 26123 26123 IHQEGDALPGHSK 13 1 0 Unmodified _IHQEGDALPGHSK_ 0 0 0 Q1ED39;H3BPL4 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.5687 3 463.568752 1387.68443 88948.04 0.76708 0.00035559 -0.59396 -0.00027534 0.17312 8.0253E-05 463.568486643132 466.239813388987 17.08 0.38289 17.08 16.937 17.32 0 54 11 8 0 0 0 3.0658E-05 2 4074 72.681 69.731 1 0.94335 0.94171 0 14341000 7376400 6964200 16709 1775 6317 6464 26124;26125 26125 IHQEGDALPGHSK 13 1 0 Unmodified _IHQEGDALPGHSK_ 0 0 0 Q1ED39;H3BPL4 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.2403 3 463.568752 1387.68443 87929.86 -0.25275 -0.00011717 0.16674 7.7298E-05 -0.086009 -3.9871E-05 463.568844972376 466.240180395016 18 0.30666 18 17.871 18.178 0 93 21 8 0 0 0 0.060311 1 3736 12.383 12.383 1 1.7333 1.3532 0 3440800 1230200 2210600 16710 1775 6317 6464 26126 26126 IHQETFGK 8 1 0 Unmodified _IHQETFGK_ 0 0 0 A8K6V3;Q15393;J3QL37 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.2582 2 480.250892 958.48723 85954.81 0.026163 1.2565E-05 0.013303 6.3889E-06 0.039467 1.8954E-05 480.251236631344 484.258074814827 18.46 0.24057 18.46 18.332 18.572 0 33 8 7 0 0 0 0.011407 1 5424 69.998 58.588 1 1.7385 1.8729 0 33712000 11798000 21914000 16711 764 6318 6465 26127 26127 IHSLPPEGK 9 1 0 Unmodified _IHSLPPEGK_ 0 0 0 Q53XN1;U3KQK5;P10176 Q53XN1 Q53XN1 COX8A Cytochrome c oxidase subunit 8A, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.2818 2 489.274367 976.53418 NaN NaN NaN 0.039599 1.9375E-05 NaN NaN NaN NaN 21.052 1.2198 21.052 20.471 21.69 0 0 0 0 0.0068846 1 7366 71.379 20.414 1 NaN NaN 0 4958500 0 4958500 16712 1464 6319 6466 26128 26128 IHSLPPEGK 9 1 0 Unmodified _IHSLPPEGK_ 0 0 0 Q53XN1;U3KQK5;P10176 Q53XN1 Q53XN1 COX8A Cytochrome c oxidase subunit 8A, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.2819 2 489.274367 976.53418 84361.88 0.3746 0.00018328 -0.21721 -0.00010628 0.15739 7.7007E-05 489.274335640415 493.281685949695 20.702 1.098 20.702 20.224 21.322 0 131 43 7 0 0 0 0.00096668 2 6902 91.853 91.853 1 0.7232 0.75127 0 18897000 12485000 6412500 16713 1464 6319 6466 26129;26130 26130 IHTEPQLSAALEYVR 15 0 1 Unmodified _IHTEPQLSAALEYVR_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;A0A1B0GVU9;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;A0A0U1RRI9;A0A0U1RQE9;A0A0U1RQL2 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.3095 3 576.308938 1725.90498 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.236 1 93.236 92.736 93.736 0 0 0 0 0.0038744 1 56538 47.545 39.161 1 16714 1575 6320 6467 26131 26131 IHTEPQLSAALEYVR 15 0 1 Unmodified _IHTEPQLSAALEYVR_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;A0A1B0GVU9;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;A0A0U1RRI9;A0A0U1RQE9;A0A0U1RQL2 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.6467 3 576.308938 1725.90498 NaN NaN NaN 0.20454 0.00011788 NaN NaN NaN NaN 91.258 0.19716 91.258 91.108 91.305 0 0 0 0 0.0072753 2 56487 41.695 28.282 1 NaN NaN 0 7313500 0 7313500 16715 1575 6320 6467 26132;26133 26133 IHTEPQLSAALEYVR 15 0 1 Unmodified _IHTEPQLSAALEYVR_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;A0A1B0GVU9;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;A0A0U1RRI9;A0A0U1RQE9;A0A0U1RQL2 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.3524 3 576.308938 1725.90498 80348.11 0.62862 0.00036228 0.32695 0.00018842 0.95557 0.0005507 576.64338595092 579.979720831917 91.502 0.39107 91.502 91.327 91.718 0 76 33 5 0 0 0 0.045643 1 56690 30.739 30.739 1 0.94475 0.94776 0 11251000 6012100 5239000 16716 1575 6320 6467 26134 26134 IHTEPQLSAALEYVR 15 0 1 Unmodified _IHTEPQLSAALEYVR_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;A0A1B0GVU9;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;A0A0U1RRI9;A0A0U1RQE9;A0A0U1RQL2 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.6427 3 576.308938 1725.90498 NaN NaN NaN -0.47643 -0.00027457 NaN NaN NaN NaN 105.35 0.33241 105.35 105.15 105.48 0 0 0 0 0.038728 1 60108 20.048 14.731 1 NaN NaN 0 1485200 1485200 0 16717 1575 6320 6467 26135 26135 IHTEPQLSAALEYVR 15 0 1 Unmodified _IHTEPQLSAALEYVR_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;A0A1B0GVU9;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;A0A0U1RRI9;A0A0U1RQE9;A0A0U1RQL2 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.3083 3 576.308938 1725.90498 81149.01 0.41754 0.00024063 0.4754 0.00027398 0.89293 0.00051461 576.643389370991 579.645473202596 105.01 0.37379 105.01 104.79 105.16 0 77 22 5 0 0 0 0.032454 1 58985 20.048 10.127 1 0.9333 0.81746 0 2539500 1198000 1341500 16718 1575 6320 6467 26136 26136 IHTTMSGYQVLR 12 0 1 Oxidation (M) _IHTTM(ox)SGYQVLR_ IHTTM(1)SGYQVLR IHTTM(70.03)SGYQVLR 0 1 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.3682 2 711.363918 1420.71328 74036.33 0.96107 0.00068367 -0.33277 -0.00023672 0.62831 0.00044695 711.86518444754 716.869371633469 36.409 0.3956 36.409 36.218 36.613 0 88 33 5 0 0 0 0.00024354 1 18691 70.028 54.399 1 1.2994 1.4157 0 29295000 9858100 19437000 16719 2038 6321 6468 26137 26137 1878 IHVLEAQDLIAK 12 1 0 Unmodified _IHVLEAQDLIAK_ 0 0 0 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8 B3KY56 B3KY56 FAM62A;ESYT1 Extended synaptotagmin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3989 2 675.393002 1348.77145 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.79 1 81.79 81.29 82.29 0 0 0 0 0.011808 1 48780 56.043 38.607 1 16720 320 6322 6469 26138 26138 IHVQGTDLPDPIATFQQLDQEYK 23 1 0 Unmodified _IHVQGTDLPDPIATFQQLDQEYK_ 0 0 0 Q9Y2R4;Q59H21 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 886.4489 3 886.113292 2655.31805 64685.49 0.73703 0.00065309 0.15482 0.00013719 0.89185 0.00079028 886.447364273974 889.11909809217 133.82 0.61221 133.82 133.61 134.23 1.5259E-05 162 25 12 0 0 0 0.00069202 2 81514 30.976 30.976 1 1.0352 0.83798 0 23329000 11311000 12017000 16721 2126 6323 6470 26139;26140 26140 IHVQGTDLPDPIATFQQLDQEYK 23 1 0 Unmodified _IHVQGTDLPDPIATFQQLDQEYK_ 0 0 0 Q9Y2R4;Q59H21 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 886.4484 3 886.113292 2655.31805 64310.04 0.76873 0.00068118 0.09486 8.4057E-05 0.86359 0.00076524 886.447741435784 889.118982657573 133.58 0.63829 133.58 133.36 134 0 154 26 12 0 0 0 1.2894E-09 2 80413 74.251 74.251 1 1.0718 0.86865 0 24361000 12555000 11806000 16722 2126 6323 6470 26141;26142 26141 IHVSDQELQSANASVDDSRLEELK 24 1 1 Unmodified _IHVSDQELQSANASVDDSRLEELK_ 0 0 1 A0A024R1A3;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.3411 4 671.584693 2682.30967 73431.25 0.86552 0.00058127 -0.23677 -0.00015901 0.62875 0.00042226 671.835525446798 676.340880603414 88.826 0.33163 88.826 88.647 88.978 -7.6294E-06 101 22 7 0 0 0 0.0084377 1 48993 21.564 21.564 1 1.3679 1.1693 0 2811600 1171300 1640300 16723 74 6324 6471 26143 26143 IHVSDQELQSANASVDDSRLEELK 24 1 1 Unmodified _IHVSDQELQSANASVDDSRLEELK_ 0 0 1 A0A024R1A3;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 676.0905 4 671.584693 2682.30967 NaN NaN NaN 0.32948 0.00022127 NaN NaN NaN NaN 88.602 0.28564 88.602 88.448 88.734 0 0 0 0 0.04678 1 48069 20.757 17.956 1 NaN NaN 0 2807800 0 2807800 16724 74 6324 6471 26144 26144 IIAATIENAQPILQIDNAR 19 0 1 Unmodified _IIAATIENAQPILQIDNAR_ 0 0 0 CON__P08779;P08779;B4DWU0;B4E2J5 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1033.0779 2 1032.57603 2063.1375 NaN NaN NaN -0.0029926 -3.0901E-06 NaN NaN NaN NaN 111.74 0.49247 111.74 111.47 111.97 7.6294E-06 0 0 0 0.00026786 1 70278 82.069 69.061 1 NaN NaN 0 33875000 33875000 0 + 16725 1159 6325 6472 26145 26145 IIAATIENAQPILQIDNAR 19 0 1 Unmodified _IIAATIENAQPILQIDNAR_ 0 0 0 CON__P08779;P08779;B4DWU0;B4E2J5 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1033.0781 2 1032.57603 2063.1375 NaN NaN NaN 0.081385 8.4036E-05 NaN NaN NaN NaN 111.18 0.45239 111.18 110.95 111.4 0 0 0 0 3.1681E-17 1 71699 138.42 106.94 1 NaN NaN 0 24276000 24276000 0 + 16726 1159 6325 6472 26146 26146 IIAATIENAQPILQIDNAR 19 0 1 Unmodified _IIAATIENAQPILQIDNAR_ 0 0 0 CON__P08779;P08779;B4DWU0;B4E2J5 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1033.0771 2 1032.57603 2063.1375 NaN NaN NaN -0.207 -0.00021374 NaN NaN NaN NaN 122.82 0.55685 122.82 122.61 123.17 0 0 0 0 0.0001558 1 73257 84.753 69.552 1 NaN NaN 0 7889800 7889800 0 + 16727 1159 6325 6472 26147 26147 IIAATIENAQPILQIDNAR 19 0 1 Unmodified _IIAATIENAQPILQIDNAR_ 0 0 0 CON__P08779;P08779;B4DWU0;B4E2J5 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1033.078 2 1032.57603 2063.1375 NaN NaN NaN -0.27556 -0.00028454 NaN NaN NaN NaN 122.67 0.50154 122.67 122.51 123.01 0 0 0 0 3.6895E-06 1 72268 99.161 77.288 1 NaN NaN 0 11913000 11913000 0 + 16728 1159 6325 6472 26148 26148 IIAEGANGPTTPEADK 16 1 0 Unmodified _IIAEGANGPTTPEADK_ 0 0 0 B4E0N9;B4DMG8;B4DMF5;B3KT18;Q53GW3;E9KL48;P00367;Q9BSD0;A0A140VK14;P49448 B4E0N9 B4E0N9 GLUD1;GLUD2 Glutamate dehydrogenase;Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.9077 2 792.399209 1582.78387 NaN NaN NaN 0.92802 0.00073536 NaN NaN NaN NaN 39.943 0.15504 39.943 39.858 40.013 0 0 0 0 0.005972 3 20799 52.693 27.393 1 NaN NaN 0 1825100 0 1825100 16729 941 6326 6473 26149;26150;26151 26150 IIAEGANGPTTPEADK 16 1 0 Unmodified _IIAEGANGPTTPEADK_ 0 0 0 B4E0N9;B4DMG8;B4DMF5;B3KT18;Q53GW3;E9KL48;P00367;Q9BSD0;A0A140VK14;P49448 B4E0N9 B4E0N9 GLUD1;GLUD2 Glutamate dehydrogenase;Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.3998 2 792.399209 1582.78387 68395.04 0.48438 0.00038382 -0.60097 -0.00047621 -0.11659 -9.2387E-05 792.399110995656 796.406951363564 46.287 0.51945 46.287 46.04 46.56 -3.8147E-06 92 31 5 0 0 0 0.0012683 1 21652 45.915 45.915 1 0.1442 0.11882 0 1841300 1540900 300430 16730 941 6326 6473 26152 26152 IIAFVGSPVEDNEK 14 1 0 Unmodified _IIAFVGSPVEDNEK_ 0 0 0 P55036;A6PVX3;Q5VWC4 P55036 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.4037 2 759.395938 1516.77732 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.479 1 87.479 86.979 87.979 7.6294E-06 0 0 0 0.0019662 1 52790 67.776 40.155 1 16731 1612 6327 6474 26153 26153 IIAFVGSPVEDNEK 14 1 0 Unmodified _IIAFVGSPVEDNEK_ 0 0 0 P55036;A6PVX3;Q5VWC4 P55036 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.4034 2 759.395938 1516.77732 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.414 1 86.414 85.914 86.914 0 0 0 0 0.00076801 1 53264 79.659 60.388 1 16732 1612 6327 6474 26154 26154 IIAIEGPDLVNGSHQK 16 1 0 Unmodified _IIAIEGPDLVNGSHQK_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.3132 3 564.308938 1689.90498 NaN NaN NaN -0.67417 -0.00038044 NaN NaN NaN NaN 87.44 0.40215 87.44 87.186 87.589 0 0 0 0 0.04347 1 48111 25.978 14.873 1 NaN NaN 0 644910 0 644910 16733 646 6328 6475 26155 26155 IIANALSSEPACLAEIEEDK 20 1 0 Unmodified _IIANALSSEPACLAEIEEDK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1087.543 2 1087.03828 2172.06201 58516.12 0.25601 0.00027829 0.10347 0.00011247 0.35947 0.00039076 1087.03857937864 1091.04587832775 107.64 0.44855 107.64 107.45 107.9 0 172 31 8 0 0 0 4.6854E-07 3 67006 83.204 83.204 1 0.65778 0.65645 0 26434000 16810000 9624500 16734 1665 6329 6476 26156;26157;26158 26157 IIANALSSEPACLAEIEEDK 20 1 0 Unmodified _IIANALSSEPACLAEIEEDK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1091.5447 2 1087.03828 2172.06201 59085.46 0.40998 0.00044567 -0.25731 -0.00027971 0.15267 0.00016596 1087.53944226698 1091.04497322746 107.16 0.43339 107.16 106.95 107.39 0 153 27 8 0 0 0 1.0676E-12 3 68290 102.5 102.5 1 0.6455 0.6652 0 25150000 15356000 9793700 16735 1665 6329 6476 26159;26160;26161 26159 IIANALSSEPACLAEIEEDK 20 1 0 Unmodified _IIANALSSEPACLAEIEEDK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1087.5397 2 1087.03828 2172.06201 57265.18 0.33249 0.00036143 -0.29522 -0.00032091 0.037275 4.0519E-05 1087.53950201894 1091.04535806168 119.09 0.53064 119.09 118.88 119.41 -7.6294E-06 139 23 9 0 0 0 8.3691E-07 2 70379 79.81 79.81 1 0.36753 0.29365 0 20329000 14452000 5877500 16736 1665 6329 6476 26162;26163 26162 IIANALSSEPACLAEIEEDK 20 1 0 Unmodified _IIANALSSEPACLAEIEEDK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1087.5399 2 1087.03828 2172.06201 58762.93 0.30763 0.0003344 -0.070885 -7.7054E-05 0.23674 0.00025735 1087.53960768641 1091.54744454161 118.9 0.51491 118.9 118.68 119.2 0 132 21 10 0 0 0 1.0127E-06 1 69332 78.191 78.191 1 0.38164 0.31115 0 25827000 18595000 7231200 16737 1665 6329 6476 26164 26164 IIAPPER 7 0 1 Unmodified _IIAPPER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;B4DUI8;Q562R1;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 398.2397 2 398.239796 794.465038 94800.96 0.039226 1.5621E-05 -1.4884 -0.00059275 -1.4492 -0.00057713 398.240077854865 403.243237646728 32.485 1.1444 32.485 32.112 33.257 3.8147E-06 457 108 10 0 0 0 0.010632 1 16015 110.61 32.863 1 1.9423 2.3192 0 3998400000 1354100000 2644300000 16738 1624;1656;1100;2186 6330 6477 26165 26165 IIAPPER 7 0 1 Unmodified _IIAPPER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;B4DUI8;Q562R1;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 398.2413 2 398.239796 794.465038 NaN NaN NaN -0.38704 -0.00015413 NaN NaN NaN NaN 31.806 1.8386 31.806 31.462 33.301 -1.9073E-06 0 0 0 0.026037 1 15639 92.467 24.068 1 NaN NaN 0 406730000 406730000 0 16739 1624;1656;1100;2186 6330 6477 26166 26166 IIAPPER 7 0 1 Unmodified _IIAPPER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;B4DUI8;Q562R1;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 403.2445 2 398.239796 794.465038 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.549 1 31.549 31.049 32.049 -1.9073E-06 0 0 0 0.032212 1 15629 73.039 20.356 1 16740 1624;1656;1100;2186 6330 6477 26167 26167 IIAPPER 7 0 1 Unmodified _IIAPPER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;B4DUI8;Q562R1;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 398.2393 2 398.239796 794.465038 NaN NaN NaN -0.11277 -4.491E-05 NaN NaN NaN NaN 36.873 1.7397 36.873 36.161 37.901 -3.8147E-06 0 0 0 0.039949 1 16536 63.287 20.813 1 NaN NaN 0 23775000 23775000 0 16741 1624;1656;1100;2186 6330 6477 26168 26168 IIAPPER 7 0 1 Unmodified _IIAPPER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;B4DUI8;Q562R1;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 398.2392 2 398.239796 794.465038 NaN NaN NaN 0.061397 2.4451E-05 NaN NaN NaN NaN 36.889 1.5186 36.889 36.211 37.73 0 0 0 0 0.031121 1 16009 69.383 17.084 1 NaN NaN 0 24260000 24260000 0 16742 1624;1656;1100;2186 6330 6477 26169 26169 IIAPPERK 8 1 1 Unmodified _IIAPPERK_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;Q7Z7J6;A6NL76;B4DUI8;Q562R1;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 308.5273 3 308.527277 922.560001 106000.1 -0.3453 -0.00010654 -0.014516 -4.4787E-06 -0.35982 -0.00011101 308.527511291869 314.534858714597 21.828 1.2092 21.828 21.659 22.869 0 279 73 11 0 0 0 0.0018488 2 7994 83.206 55.952 1 2.3733 2.9012 0 1062200000 319340000 742850000 16743 1624;1656;1100;2186 6331 6478 26170;26171 26171 IIAPPERK 8 1 1 Unmodified _IIAPPERK_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;Q7Z7J6;A6NL76;B4DUI8;Q562R1;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.287 2 462.287277 922.560001 87747.36 -0.1134 -5.2424E-05 -0.37465 -0.0001732 -0.48805 -0.00022562 462.287363737426 471.298150078668 21.845 0.62212 21.845 21.659 22.281 0 208 36 10 0 0 0 0.011827 2 7977 94.262 62.18 1 2.1912 2.6734 0 785900000 249830000 536060000 16744 1624;1656;1100;2186 6331 6478 26172;26173 26172 IIAPPERK 8 1 1 Unmodified _IIAPPERK_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;Q7Z7J6;A6NL76;B4DUI8;Q562R1;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 308.5273 3 308.527277 922.560001 105507 0.10897 3.3621E-05 -0.50499 -0.0001558 -0.39602 -0.00012218 308.527247618372 314.534672254766 21.595 1.4171 21.595 21.426 22.843 0 257 65 9 0 0 0 0.0021065 2 7657 78.77 47.467 1 2.2889 2.7386 0 1111300000 343730000 767580000 16745 1624;1656;1100;2186 6331 6478 26174;26175 26175 IIAPPERK 8 1 1 Unmodified _IIAPPERK_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;Q7Z7J6;A6NL76;B4DUI8;Q562R1;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.2985 2 462.287277 922.560001 87101.08 0.11472 5.3036E-05 -0.12387 -5.7262E-05 -0.0091433 -4.2268E-06 462.287195943628 471.298374276867 23.384 1.2467 23.384 23.124 24.37 0 226 66 8 0 0 0 0.055838 1 7813 55.676 38.712 1 2.8057 2.4862 0 49423000 12724000 36699000 16746 1624;1656;1100;2186 6331 6478 26176 26176 IIAPPERK 8 1 1 Unmodified _IIAPPERK_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;Q7Z7J6;A6NL76;B4DUI8;Q562R1;B3KPP5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.2982 2 462.287277 922.560001 87325.21 0.05867 2.7122E-05 -0.4845 -0.00022398 -0.42583 -0.00019686 462.287269834769 471.298180050894 23.224 1.0813 23.224 23.04 24.122 0 200 59 8 0 0 0 0.032281 1 7241 65.676 45.121 1 2.6882 2.2917 0 53753000 14471000 39282000 16747 1624;1656;1100;2186 6331 6478 26177 26177 IIATVLMTEDIK 12 1 0 Oxidation (M) _IIATVLM(ox)TEDIK_ IIATVLM(1)TEDIK IIATVLM(64.06)TEDIK 0 1 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;C9J6B6;C9K073;C9J2Z7 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.8813 2 681.881078 1361.7476 75058.16 0.71698 0.00048889 -0.48046 -0.00032762 0.23652 0.00016128 681.881036815546 685.887816273657 88.767 0.55097 88.767 88.504 89.055 0 134 47 5 0 0 0 0.00043857 2 54758 64.064 45.753 1 2.2959 2.4829 0 21980000 6791400 15189000 16748 896 6332 6479 26178;26179 26179 703 IICHSYLER 9 0 1 Unmodified _IICHSYLER_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.8074 2 595.802965 1189.59138 81175.97 0.62041 0.00036964 0.39645 0.0002362 1.0169 0.00060585 595.803322656689 600.806990048779 31.713 0.34789 31.713 31.482 31.829 0 108 32 5 0 0 0 0.005135 1 15589 67.494 55.983 1 1.2496 1.2902 0 20056000 10061000 9994800 16749 2059 6333 6480 26180 26180 IICHSYLER 9 0 1 Unmodified _IICHSYLER_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.5373 3 397.537736 1189.59138 NaN NaN NaN 0.97029 0.00038573 NaN NaN NaN NaN 31.7 0.71003 31.7 31.402 32.112 1.9073E-06 0 0 0 0.037639 1 15554 34.803 26.221 1 NaN NaN 0 14908000 14908000 0 16750 2059 6333 6480 26181 26181 IICHSYLER 9 0 1 Unmodified _IICHSYLER_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.8074 2 595.802965 1189.59138 81137.38 0.42573 0.00025365 0.72379 0.00043124 1.1495 0.00068489 595.803549023681 600.807534661315 30.536 0.56549 30.536 30.187 30.752 0 101 46 5 0 0 0 0.0018366 2 14954 80.219 62.979 1 1.0651 1.0845 0 20547000 9691300 10855000 16751 2059 6333 6480 26182;26183 26183 IICHSYLER 9 0 1 Unmodified _IICHSYLER_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.5368 3 397.537736 1189.59138 94314.38 0.00095905 3.8126E-07 0.17096 6.7962E-05 0.17192 6.8343E-05 397.537644099874 400.873959715849 30.526 0.652 30.526 30.133 30.785 -1.9073E-06 196 54 5 0 0 0 0.0019724 1 14977 55.064 40.857 1 0.94985 1.0401 0 32277000 14373000 17904000 16752 2059 6333 6480 26184 26184 IICHSYLER 9 0 1 Unmodified _IICHSYLER_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 400.8737 3 397.537736 1189.59138 94114.84 -0.052459 -2.0855E-05 0.33802 0.00013438 0.28557 0.00011352 397.537722025367 400.87389789951 35.77 0.99506 35.77 35.273 36.268 0 316 82 6 0 0 0 0.046608 1 15995 20.207 14.426 1 1.9813 1.6276 0 11992000 4059300 7933100 16753 2059 6333 6480 26185 26185 IICHSYLER 9 0 1 Unmodified _IICHSYLER_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.8079 2 595.802965 1189.59138 78252.44 0.66674 0.00039724 0.16843 0.00010035 0.83517 0.00049759 595.803583060914 600.806904126086 35.642 0.8125 35.642 35.236 36.049 0 271 69 6 0 0 0 0.048145 1 15303 38.776 34.085 1 1.8043 1.497 0 5503800 1874100 3629800 16754 2059 6333 6480 26186 26186 IIDAALR 7 0 1 Unmodified _IIDAALR_ 0 0 0 H3BNX8;P20674;H3BRM5;H3BV69 H3BNX8 H3BNX8 COX5A Cytochrome c oxidase subunit 5A, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 386.2406 2 386.239796 770.465038 97060.09 0.47627 0.00018395 -0.48468 -0.0001872 -0.008416 -3.2506E-06 386.239680614785 391.243545300725 44.194 0.82379 44.194 43.853 44.677 0 305 72 6 0 0 0 0.032066 2 24250 66.138 11.612 1 1.1225 1.2937 0 54496000 27133000 27362000 16755 1301 6334 6481 26187;26188 26188 IIDEDGLLNLIR 12 0 1 Unmodified _IIDEDGLLNLIR_ 0 0 0 P35251;Q14756;H0Y8U4 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.3952 2 692.395741 1382.77693 NaN NaN NaN -0.15011 -0.00010393 NaN NaN NaN NaN 122.96 0.61781 122.96 122.69 123.31 0 0 0 0 4.1806E-13 1 79585 120.99 89.76 1 NaN NaN 0 14338000 14338000 0 16756 1542 6335 6482 26189 26189 IIDEDGLLNLIR 12 0 1 Unmodified _IIDEDGLLNLIR_ 0 0 0 P35251;Q14756;H0Y8U4 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.8978 2 692.395741 1382.77693 NaN NaN NaN -0.096707 -6.696E-05 NaN NaN NaN NaN 122.46 0.58215 122.46 122.22 122.81 0 0 0 0 5.4154E-20 1 81176 136.63 103.79 1 NaN NaN 0 12998000 12998000 0 16757 1542 6335 6482 26190 26190 IIDEDGLLNLIR 12 0 1 Unmodified _IIDEDGLLNLIR_ 0 0 0 P35251;Q14756;H0Y8U4 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.3967 2 692.395741 1382.77693 73802.41 0.6338 0.00043884 -0.5832 -0.00040381 0.050595 3.5032E-05 692.394378763967 697.399976135073 134.52 0.34503 134.52 134.41 134.76 0 33 9 7 0 0 0 2.786E-05 2 81296 100.02 86.425 1 0.56395 0.46607 0 14647000 8946200 5700800 16758 1542 6335 6482 26191;26192 26191 IIDETMAQLQDLK 13 1 0 Oxidation (M) _IIDETM(ox)AQLQDLK_ IIDETM(1)AQLQDLK IIDETM(84.66)AQLQDLK 0 1 0 Q14683;G8JLG1 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.4033 2 767.395081 1532.77561 NaN NaN NaN -0.2865 -0.00021986 NaN NaN NaN NaN 74.722 0.37697 74.722 74.515 74.892 0 0 0 0 0.00013615 1 43865 84.658 58.54 1 NaN NaN 0 4843700 0 4843700 16759 1739 6336 6483 26193 26193 1571 IIDEVVNK 8 1 0 Unmodified _IIDEVVNK_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.2687 2 465.26875 928.522947 89660.96 0.36224 0.00016854 -0.012934 -6.0178E-06 0.34931 0.00016252 465.268585740157 469.275786321119 39.125 0.68866 39.125 38.83 39.518 0 223 54 6 0 0 0 0.017078 2 20204 60.682 18.587 1 1.2346 1.382 0 64163000 28862000 35300000 16760 900 6337 6484 26194;26195 26195 IIDEVVNK 8 1 0 Unmodified _IIDEVVNK_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2689 2 465.26875 928.522947 88627.88 0.044318 2.062E-05 0.13146 6.1163E-05 0.17578 8.1783E-05 465.268694954228 469.275898890249 38.132 0.68774 38.132 37.946 38.633 0 189 55 5 0 0 0 0.029249 1 19920 52.716 26.493 1 1.1499 1.287 0 83906000 37907000 46000000 16761 900 6337 6484 26196 26196 IIDINYYPVPEACLSNK 17 1 0 Unmodified _IIDINYYPVPEACLSNK_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8;B4DS95;B4DXD1;E9PL69;B4DXB0 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1009.0139 2 1005.00606 2007.99756 NaN NaN NaN -0.35659 -0.00035838 NaN NaN NaN NaN 109.81 0.3101 109.81 109.6 109.91 0 0 0 0 0.0018482 1 70501 55.452 42.892 1 NaN NaN 0 4573600 0 4573600 16762 1014 6338 6485 26197 26197 IIDISDVFR 9 0 1 Unmodified _IIDISDVFR_ 0 0 0 A8K4A8;A0A024R8Z9;Q6PI48;Q9H9J7;Q9NVT8 A8K4A8 A8K4A8 DARS2 Aspartate--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3054 2 539.300581 1076.58661 84212.91 0.9242 0.00049842 -0.30719 -0.00016567 0.61701 0.00033275 539.300417337773 544.304491725212 112.85 0.45361 112.85 112.63 113.08 0 104 33 4 0 0 0 0.0043738 1 71259 69.423 55.266 1 1.6683 1.7007 0 6863900 2613900 4250000 16763 266 6339 6486 26198 26198 IIDISDVFR 9 0 1 Unmodified _IIDISDVFR_ 0 0 0 A8K4A8;A0A024R8Z9;Q6PI48;Q9H9J7;Q9NVT8 A8K4A8 A8K4A8 DARS2 Aspartate--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.3045 2 539.300581 1076.58661 84946.19 0.8369 0.00045134 -0.46496 -0.00025075 0.37194 0.00020059 539.30039096307 544.304356242654 112.25 0.44344 112.25 112.02 112.46 0 110 33 4 0 0 0 0.0089883 1 72514 60.59 41.807 1 1.6612 1.6744 0 6449000 2471700 3977200 16764 266 6339 6486 26199 26199 IIDVVYNASNNELVR 15 0 1 Unmodified _IIDVVYNASNNELVR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 859.9581 2 859.957226 1717.8999 64277.31 0.85775 0.00073762 -0.069755 -5.9986E-05 0.78799 0.00067764 859.957285170161 864.961256427016 94.268 2.123 94.268 93.801 95.924 0 1090 183 10 0 0 0 2.5819E-38 5 57043 164.13 164.13 1 0.73549 0.87438 0 1194200000 675300000 518870000 16765 1635 6340 6487 26200;26201;26202;26203;26204 26201 IIDVVYNASNNELVR 15 0 1 Unmodified _IIDVVYNASNNELVR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 859.9567 2 859.957226 1717.8999 64688.35 0.66665 0.00057329 0.20258 0.00017421 0.86923 0.0007475 859.957563695454 864.961506381886 93.53 1.6286 93.53 93.096 94.725 -7.6294E-06 1015 141 12 0 0 0 2.2061E-30 5 57811 153.34 153.34 1 0.74564 0.87995 0 1283000000 740660000 542350000 16766 1635 6340 6487 26205;26206;26207;26208;26209 26206 IIDVVYNASNNELVR 15 0 1 Unmodified _IIDVVYNASNNELVR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 864.9622 2 859.957226 1717.8999 63374.02 0.66882 0.00057515 -0.13282 -0.00011422 0.536 0.00046093 859.957370458852 864.961292233512 107.51 2.62 107.51 107.16 109.78 0 704 137 13 0 0 0 2.8008E-30 5 61493 150.68 139.78 1 0.88442 0.77148 0 467280000 240810000 226470000 16767 1635 6340 6487 26210;26211;26212;26213;26214 26211 IIDVVYNASNNELVR 15 0 1 Unmodified _IIDVVYNASNNELVR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.9578 2 859.957226 1717.8999 63278.79 0.70786 0.00060873 0.2182 0.00018764 0.92606 0.00079637 860.458378610997 865.463315425128 110.56 1.6501 110.56 109.78 111.43 0 157 78 5 0 0 0 0.00029768 1 64010 60.49 60.49 1 3.257 2.8004 0 7756000 1575600 6180400 16768 1635 6340 6487 26215 26215 IIDVVYNASNNELVR 15 0 1 Unmodified _IIDVVYNASNNELVR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.9583 2 859.957226 1717.8999 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.12 1 109.12 108.62 109.62 0 0 0 0 0.0014567 1 62810 64.55 32.542 1 16769 1635 6340 6487 26216 26216 IIDVVYNASNNELVR 15 0 1 Unmodified _IIDVVYNASNNELVR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.9573 2 859.957226 1717.8999 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.18 1 109.18 108.68 109.68 0 0 0 0 5.6064E-07 1 62853 99.5 54.735 1 16770 1635 6340 6487 26217 26217 IIDVVYNASNNELVR 15 0 1 Unmodified _IIDVVYNASNNELVR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 860.4599 2 859.957226 1717.8999 63302.74 0.51855 0.00044593 0.043328 3.726E-05 0.56187 0.00048319 859.957484875509 864.961430543603 107.47 3.0487 107.47 107 110.05 7.6294E-06 809 163 13 0 0 0 3.1707E-15 4 60461 130.56 130.56 1 0.87683 0.76635 0 437240000 235410000 201830000 16771 1635 6340 6487 26218;26219;26220;26221 26218 IIDVVYNASNNELVR 15 0 1 Unmodified _IIDVVYNASNNELVR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 860.457 2 859.957226 1717.8999 63475.73 0.55714 0.00047911 -1.4093 -0.001212 -0.8522 -0.00073286 860.455696356634 864.961156088128 111.33 0.44871 111.33 111.11 111.56 7.6294E-06 46 21 4 0 0 0 6.0114E-06 1 63633 74.611 62.034 1 0.77443 0.68983 0 2346200 1224300 1121900 16772 1635 6340 6487 26222 26222 IIDYSQMDELALLSLR 16 0 1 Oxidation (M) _IIDYSQM(ox)DELALLSLR_ IIDYSQM(1)DELALLSLR IIDYSQM(95.4)DELALLSLR 0 1 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 953.999 2 948.492784 1894.97101 NaN NaN NaN -1.0961 -0.0010397 NaN NaN NaN NaN 120.37 0.52042 120.37 120.12 120.64 0 0 0 0 5.3397E-09 1 77561 95.401 72.484 1 NaN NaN 0 8925000 0 8925000 16773 1741 6341 6488 26223 26223 1582 IIDYSQMDELALLSLR 16 0 1 Oxidation (M) _IIDYSQM(ox)DELALLSLR_ IIDYSQM(1)DELALLSLR IIDYSQM(100.22)DELALLSLR 0 1 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 953.498 2 948.492784 1894.97101 61605.57 0.7989 0.00075775 -1.2859 -0.0012196 -0.48697 -0.00046188 948.994044508124 953.4960922294 119.93 0.5278 119.93 119.55 120.08 -7.6294E-06 176 38 9 0 0 0 1.0619E-08 2 79082 100.22 86.259 1 1.2643 1.2886 0 20621000 10130000 10492000 16774 1741 6341 6488 26224;26225 26225 1582 IIDYSQMDELALLSLR 16 0 1 Unmodified _IIDYSQMDELALLSLR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 940.4958 2 940.495326 1878.9761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.85 1 130.85 130.35 131.35 0 0 0 0 0.00096075 1 85346 66.262 51.061 1 16775 1741 6341 6489 26226 26226 IIDYSQMDELALLSLR 16 0 1 Unmodified _IIDYSQMDELALLSLR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 940.9979 2 940.495326 1878.9761 67527.81 0.93309 0.00087756 0.88776 0.00083493 1.8208 0.0017125 940.997296254529 945.500076785159 130.52 0.3208 130.52 130.34 130.66 0 51 19 5 0 0 0 2.9834E-05 1 87213 85.288 85.288 1 0.99068 1.0368 0 4258700 1718800 2539900 16776 1741 6341 6489 26227 26227 IIEDQQESLNK 11 1 0 Unmodified _IIEDQQESLNK_ 0 0 0 B5BUB5;P05455;Q14730;Q9UMH5 B5BUB5 B5BUB5 SSB Lupus La protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.8387 2 658.838256 1315.66196 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.555 1 30.555 30.055 31.055 0 0 0 0 0.00030701 1 14956 78.556 47.483 1 16777 1077 6342 6490 26228 26228 IIEDQQESLNK 11 1 0 Unmodified _IIEDQQESLNK_ 0 0 0 B5BUB5;P05455;Q14730;Q9UMH5 B5BUB5 B5BUB5 SSB Lupus La protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.8391 2 658.838256 1315.66196 75494.85 0.68254 0.00044968 -0.56257 -0.00037065 0.11996 7.9037E-05 658.838180947748 662.845186792216 29.998 0.49316 29.998 29.835 30.328 0 116 39 4 0 0 0 0.00035027 1 14583 85.377 36.581 1 1.5101 1.5301 0 12961000 4769800 8191600 16778 1077 6342 6490 26229 26229 IIEENIPELLSLNLSNNR 18 0 1 Unmodified _IIEENIPELLSLNLSNNR_ 0 0 0 Q9UBU9;E9PIN3;B4E3J0;B4E227;Q59E96 Q9UBU9 Q9UBU9 NXF1 Nuclear RNA export factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1046.0696 2 1041.06549 2080.11643 NaN NaN NaN -0.54438 -0.00056673 NaN NaN NaN NaN 125.8 0.22263 125.8 125.67 125.9 -7.6294E-06 0 0 0 0.006309 1 83796 43.382 36.18 1 NaN NaN 0 2588700 0 2588700 16779 2099 6343 6491 26230 26230 IIEPIQSR 8 0 1 Unmodified _IIEPIQSR_ 0 0 0 Q75MT5;B5BUD2;P35250;A0A087WVY3;H7C5P4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2828 2 478.282192 954.549831 87949.32 0.29137 0.00013936 0.47652 0.00022791 0.76789 0.00036727 478.282322321355 483.286400439812 42.878 0.36209 42.878 42.734 43.096 3.8147E-06 98 28 4 0 0 0 0.013893 2 22818 64.265 30.468 1 1.018 1.058 0 20904000 9773600 11131000 16780 1079 6344 6492 26231;26232 26232 IIEPIQSR 8 0 1 Unmodified _IIEPIQSR_ 0 0 0 Q75MT5;B5BUD2;P35250;A0A087WVY3;H7C5P4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.2831 2 478.282192 954.549831 90228.98 0.21111 0.00010097 0.49501 0.00023675 0.70612 0.00033772 478.282621938892 483.286366976342 41.98 0.71605 41.98 41.697 42.413 0 143 63 4 0 0 0 0.015121 2 22596 61.962 32.813 1 1.4515 1.5003 0 21647000 9839600 11807000 16781 1079 6344 6492 26233;26234 26233 IIEPLTSR 8 0 1 Unmodified _IIEPLTSR_ 0 0 0 P35249;C9J8M3;C9JZI1 P35249 P35249 RFC4 Replication factor C subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.7814 2 464.776742 927.538931 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.393 1 51.393 50.893 51.893 3.8147E-06 0 0 0 0.02717 1 28430 64.265 1.5473 1 16782 1541 6345 6493 26235 26235 IIETPGIR 8 0 1 Unmodified _IIETPGIR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.7761 2 449.77146 897.528367 NaN NaN NaN 0.59178 0.00026616 NaN NaN NaN NaN 50.083 0.6832 50.083 49.784 50.467 0 0 0 0 0.0090383 1 28187 79.116 24.591 1 NaN NaN 0 34054000 0 34054000 16783 1207 6346 6494 26236 26236 IIFVDEVFK 9 1 0 Unmodified _IIFVDEVFK_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.3223 2 555.3157 1108.61685 80914.95 0.4016 0.00022302 -0.0048325 -2.6835E-06 0.39677 0.00022033 555.315692956378 559.322575803969 114.37 0.65057 114.37 114.03 114.68 0 170 46 6 0 0 0 0.0091583 1 72505 60.436 60.436 1 0.58957 0.60409 0 13052000 8349300 4703000 16784 406 6347 6495 26237 26237 IIFVDEVFK 9 1 0 Unmodified _IIFVDEVFK_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.3228 2 555.3157 1108.61685 83001.16 0.42383 0.00023536 -0.014924 -8.2877E-06 0.40891 0.00022707 555.315597432191 559.322642548348 113.71 0.76411 113.71 113.44 114.21 0 192 55 5 0 0 0 0.017976 2 73672 52.482 52.482 1 0.58184 0.58392 0 13747000 8141100 5605500 16785 406 6347 6495 26238;26239 26239 IIFVDEVFK 9 1 0 Unmodified _IIFVDEVFK_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.3162 2 555.3157 1108.61685 82237.51 0.60355 0.00033516 -0.01772 -9.8401E-06 0.58583 0.00032532 555.315641040253 559.322513819901 125.31 1.0046 125.31 125.04 126.04 -7.6294E-06 121 42 6 0 0 0 0.042881 2 75148 40.882 40.882 1 0.83756 0.66209 0 3048200 1711600 1336600 16786 406 6347 6495 26240;26241 26241 IIFVDEVFK 9 1 0 Unmodified _IIFVDEVFK_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.323 2 555.3157 1108.61685 82606.11 0.77415 0.0004299 -0.16339 -9.0733E-05 0.61076 0.00033916 555.315493487731 559.322491888604 125.17 0.7657 125.17 124.87 125.64 0 116 33 6 0 0 0 0.051211 1 74106 37.549 34.712 1 0.86608 0.6874 0 3136900 1781400 1355500 16787 406 6347 6495 26242 26242 IIFVVGGPGSGK 12 1 0 Unmodified _IIFVVGGPGSGK_ 0 0 0 Q6FGX9;Q53EY8;Q5T9B7;P00568 Q6FGX9 Q6FGX9 AK1 Adenylate kinase isoenzyme 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.8394 2 565.832049 1129.64954 NaN NaN NaN 0.53971 0.00030538 NaN NaN NaN NaN 83.79 0.43011 83.79 83.477 83.908 0 0 0 0 0.0014978 1 50085 77.379 53.95 1 NaN NaN 0 5449700 0 5449700 16788 1436 6348 6496 26243 26243 IIFVVGGPGSGK 12 1 0 Unmodified _IIFVVGGPGSGK_ 0 0 0 Q6FGX9;Q53EY8;Q5T9B7;P00568 Q6FGX9 Q6FGX9 AK1 Adenylate kinase isoenzyme 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.8394 2 565.832049 1129.64954 NaN NaN NaN 0.29338 0.000166 NaN NaN NaN NaN 82.682 0.37809 82.682 82.393 82.771 0 0 0 0 0.0063368 1 50664 60.518 44.316 1 NaN NaN 0 5322100 0 5322100 16789 1436 6348 6496 26244 26244 IIFVVGGPGSGK 12 1 0 Unmodified _IIFVVGGPGSGK_ 0 0 0 Q6FGX9;Q53EY8;Q5T9B7;P00568 Q6FGX9 Q6FGX9 AK1 Adenylate kinase isoenzyme 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8367 2 565.832049 1129.64954 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.527 1 82.527 82.027 83.027 0 0 0 0 0.02491 1 50516 59.426 33.976 1 16790 1436 6348 6496 26245 26245 IIGATDSCGDLMFLMK 16 1 0 2 Oxidation (M) _IIGATDSCGDLM(ox)FLM(ox)K_ IIGATDSCGDLM(1)FLM(1)K IIGATDSCGDLM(113.61)FLM(113.61)K 0 2 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.4207 2 902.419916 1802.82528 62494.27 0.9163 0.00082689 -0.8009 -0.00072275 0.1154 0.00010414 902.419153367648 906.426780108484 97.216 0.84793 97.216 96.752 97.6 -7.6294E-06 428 65 8 0 0 0 6.9808E-12 2 60590 113.61 113.61 1 1.059 1.194 0 61447000 31231000 30216000 16791 1568 6349 6497 26246;26247 26247 1324;1325 IIGATDSCGDLMFLMK 16 1 0 2 Oxidation (M) _IIGATDSCGDLM(ox)FLM(ox)K_ IIGATDSCGDLM(1)FLM(1)K IIGATDSCGDLM(70.68)FLM(70.68)K 0 2 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 902.9202 2 902.419916 1802.82528 62715.11 0.39963 0.00036063 -0.86747 -0.00078283 -0.46785 -0.00042219 902.41959388742 906.426409938804 110.48 0.68285 110.48 110.27 110.95 -7.6294E-06 183 36 9 0 0 0 0.00018463 2 62855 70.685 70.685 1 0.35809 0.29155 0 12941000 9804400 3136400 16792 1568 6349 6497 26248;26249 26249 1324;1325 IIGATDSSGELMFLMK 16 1 0 2 Oxidation (M) _IIGATDSSGELM(ox)FLM(ox)K_ IIGATDSSGELM(1)FLM(1)K IIGATDSSGELM(87)FLM(87)K 0 2 0 B5MD17;J3KS05;Q6IBN6;P83916;K7ELA4;A4D177;Q13185 B5MD17;A4D177 A4D177 CBX1;CBX3 Chromobox protein homolog 1;Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.4376 2 872.928431 1743.84231 63974.12 0.62105 0.00054213 -0.43361 -0.00037851 0.18743 0.00016361 872.928337421349 876.935473692851 98.961 1.4722 98.961 98.305 99.778 0 626 120 9 0 0 0 1.0942E-05 4 60818 87.001 87.001 1 1.7427 1.9984 0 194450000 71758000 122690000 16793 662;1081 6350 6498 26250;26251;26252;26253 26252 516;517 IIGATDSSGELMFLMK 16 1 0 2 Oxidation (M) _IIGATDSSGELM(ox)FLM(ox)K_ IIGATDSSGELM(1)FLM(1)K IIGATDSSGELM(117.79)FLM(117.79)K 0 2 0 B5MD17;J3KS05;Q6IBN6;P83916;K7ELA4;A4D177;Q13185 B5MD17;A4D177 A4D177 CBX1;CBX3 Chromobox protein homolog 1;Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 876.9356 2 872.928431 1743.84231 64237.95 0.67986 0.00059347 -0.39843 -0.0003478 0.28143 0.00024567 872.928392441631 876.935416664754 98.397 1.3108 98.397 97.688 98.999 0 617 111 8 0 0 0 4.4859E-12 3 61793 117.79 117.79 1 1.82 2.1329 0 319310000 113630000 205680000 16794 662;1081 6350 6498 26254;26255;26256 26256 516;517 IIGATDSSGELMFLMK 16 1 0 2 Oxidation (M) _IIGATDSSGELM(ox)FLM(ox)K_ IIGATDSSGELM(1)FLM(1)K IIGATDSSGELM(72.34)FLM(72.34)K 0 2 0 B5MD17;J3KS05;Q6IBN6;P83916;K7ELA4;A4D177;Q13185 B5MD17;A4D177 A4D177 CBX1;CBX3 Chromobox protein homolog 1;Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 872.9288 2 872.928431 1743.84231 65533.23 0.75348 0.00065774 -0.32601 -0.00028459 0.42747 0.00037315 872.928440790041 876.935181149672 111.67 0.75635 111.67 111.27 112.03 0 221 42 8 0 0 0 0.00018551 2 64702 72.34 72.34 1 0.48317 0.39195 0 26048000 17659000 8388900 16795 662;1081 6350 6498 26257;26258 26258 516;517 IIGATDSSGELMFLMK 16 1 0 2 Oxidation (M) _IIGATDSSGELM(ox)FLM(ox)K_ IIGATDSSGELM(1)FLM(1)K IIGATDSSGELM(87)FLM(87)K 0 2 0 B5MD17;J3KS05;Q6IBN6;P83916;K7ELA4;A4D177;Q13185 B5MD17;A4D177 A4D177 CBX1;CBX3 Chromobox protein homolog 1;Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 872.9288 2 872.928431 1743.84231 65861.53 0.3197 0.00027908 -0.036721 -3.2055E-05 0.28298 0.00024702 872.928616394895 876.935564037851 111.53 0.78253 111.53 111.21 111.99 0 206 43 7 0 0 0 1.0942E-05 2 63698 87.001 87.001 1 0.43941 0.35401 0 22971000 16480000 6490600 16796 662;1081 6350 6498 26259;26260 26260 516;517 IIGATDSSGELMFLMK 16 1 0 Oxidation (M) _IIGATDSSGELM(ox)FLMK_ IIGATDSSGELM(0.826)FLM(0.174)K IIGATDSSGELM(6.75)FLM(-6.75)K 0 1 0 B5MD17;J3KS05;Q6IBN6;P83916;K7ELA4;A4D177;Q13185 B5MD17;A4D177 A4D177 CBX1;CBX3 Chromobox protein homolog 1;Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.4411 2 864.930973 1727.84739 65352.77 0.74691 0.00064603 0.67509 0.00058391 1.422 0.0012299 865.433464579031 868.939100602869 122.91 0.45261 122.91 122.72 123.17 -7.6294E-06 95 21 6 0 0 0 0.00084257 1 73353 43.897 43.897 2 1.1798 0.93806 0 6613700 3120500 3493200 16797 662;1081 6350 6499 26261 26261 516;517 IIGATDSSGELMFLMK 16 1 0 Oxidation (M) _IIGATDSSGELM(ox)FLMK_ IIGATDSSGELM(0.559)FLM(0.441)K IIGATDSSGELM(1.04)FLM(-1.04)K 0 1 0 B5MD17;J3KS05;Q6IBN6;P83916;K7ELA4;A4D177;Q13185 B5MD17;A4D177 A4D177 CBX1;CBX3 Chromobox protein homolog 1;Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 869.4405 2 864.930973 1727.84739 67129.56 0.67625 0.00058491 0.7417 0.00064152 1.418 0.0012264 865.433126550871 869.441022257428 122.79 0.50833 122.79 122.56 123.07 7.6294E-06 128 24 7 0 0 0 0.00015846 1 72349 53.967 53.967 2 1.2426 1.0141 0 7957900 3584900 4373000 16798 662;1081 6350 6499 26262 26262 516;517 IIGAVDQIQLTQAQLEER 18 0 1 Unmodified _IIGAVDQIQLTQAQLEER_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1013.5541 2 1013.05239 2024.09022 60926.08 0.50904 0.00051569 -0.087808 -8.8954E-05 0.42123 0.00042673 1013.55379875089 1018.05622973371 104.53 0.73454 104.53 104.25 104.99 0 341 61 7 0 0 0 1.5217E-50 2 64510 164.64 164.64 1 0.91261 1.0132 0 70142000 35770000 34371000 16799 1017 6351 6500 26263;26264 26264 IIGAVDQIQLTQAQLEER 18 0 1 Unmodified _IIGAVDQIQLTQAQLEER_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1013.0524 2 1013.05239 2024.09022 60651.95 0.24654 0.00024976 -0.050188 -5.0843E-05 0.19636 0.00019892 1013.55379512813 1018.55792701503 103.9 0.74328 103.9 103.61 104.35 0 354 64 7 0 0 0 4.4274E-51 2 65653 172.57 172.57 1 0.93976 1.0856 0 55883000 29135000 26748000 16800 1017 6351 6500 26265;26266 26266 IIGAVDQIQLTQAQLEER 18 0 1 Unmodified _IIGAVDQIQLTQAQLEER_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1018.0577 2 1013.05239 2024.09022 59741.5 0.50888 0.00051552 -0.32573 -0.00032999 0.18314 0.00018553 1013.55374180124 1018.05633578831 116.1 0.53529 116.1 115.82 116.36 0 145 22 9 0 0 0 1.2852E-11 2 68190 102.9 102.9 1 0.89688 0.74268 0 19976000 10464000 9511500 16801 1017 6351 6500 26267;26268 26268 IIGAVDQIQLTQAQLEER 18 0 1 Unmodified _IIGAVDQIQLTQAQLEER_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1018.5583 2 1013.05239 2024.09022 60173.77 0.54235 0.00054943 -0.20268 -0.00020533 0.33967 0.00034411 1013.05227248507 1018.05637882732 115.93 0.55762 115.93 115.74 116.3 0 164 27 9 0 0 0 2.9734E-16 2 67086 113.25 113.25 1 0.91943 0.79953 0 24569000 12438000 12130000 16802 1017 6351 6500 26269;26270 26270 IIGDASTQTDALK 13 1 0 Unmodified _IIGDASTQTDALK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8616 2 666.853906 1331.69326 NaN NaN NaN -0.20096 -0.00013401 NaN NaN NaN NaN 49.452 0.37103 49.452 49.155 49.526 3.8147E-06 0 0 0 0.0041613 1 27805 62.466 36.528 1 NaN NaN 0 5688000 0 5688000 16803 1835 6352 6501 26271 26271 IIGLDQVAGMSETALPGAFK 20 1 0 Oxidation (M) _IIGLDQVAGM(ox)SETALPGAFK_ IIGLDQVAGM(1)SETALPGAFK IIGLDQVAGM(79.64)SETALPGAFK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1018.0345 2 1017.53244 2033.05033 60752.32 0.37594 0.00038253 0.072629 7.3902E-05 0.44856 0.00045643 1018.03431504485 1022.04114421929 115.5 0.80444 115.5 115.24 116.05 0 337 52 11 0 0 0 4.145E-07 1 73454 79.639 79.639 1 2.0847 2.3519 0 111090000 36664000 74423000 16804 81 6353 6502 26272 26272 58 IIGLDQVAGMSETALPGAFK 20 1 0 Oxidation (M) _IIGLDQVAGM(ox)SETALPGAFK_ IIGLDQVAGM(1)SETALPGAFK IIGLDQVAGM(67.36)SETALPGAFK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1022.0413 2 1017.53244 2033.05033 60983.46 0.43557 0.00044321 0.092919 9.4548E-05 0.52849 0.00053776 1018.03417931636 1022.04116397379 115.01 0.65249 115.01 114.78 115.44 0 302 42 11 0 0 0 1.1604E-06 4 74816 67.358 67.358 1 2.1365 2.4144 0 130630000 37624000 93008000 16805 81 6353 6502 26273;26274;26275;26276 26273 58 IIGLDQVAGMSETALPGAFK 20 1 0 Oxidation (M) _IIGLDQVAGM(ox)SETALPGAFK_ IIGLDQVAGM(1)SETALPGAFK IIGLDQVAGM(73.83)SETALPGAFK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1021.5412 2 1017.53244 2033.05033 59777.51 0.43694 0.0004446 -0.01407 -1.4316E-05 0.42287 0.00043028 1018.03398151911 1022.041088548 126.89 0.97029 126.89 126.57 127.54 -7.6294E-06 186 40 7 0 0 0 7.3278E-07 2 76321 73.834 73.834 1 2.3278 1.865 0 20930000 6630000 14300000 16806 81 6353 6502 26277;26278 26277 58 IIGLDQVAGMSETALPGAFK 20 1 0 Oxidation (M) _IIGLDQVAGM(ox)SETALPGAFK_ IIGLDQVAGM(1)SETALPGAFK IIGLDQVAGM(89.91)SETALPGAFK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1022.0416 2 1017.53244 2033.05033 60368.25 0.30501 0.00031036 0.14836 0.00015096 0.45337 0.00046132 1018.03431347171 1021.53977834064 126.78 0.75645 126.78 126.53 127.28 0 174 32 7 0 0 0 3.811E-09 2 75363 89.911 89.911 1 2.2649 1.8602 0 27765000 8140000 19625000 16807 81 6353 6502 26279;26280 26279 58 IIHDFPQFYPLGIVQHD 17 0 0 Unmodified _IIHDFPQFYPLGIVQHD_ 0 0 0 B5MC59;A4D105;P35244 B5MC59 B5MC59 RPA3 Replication protein A 14 kDa subunit ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.6866 3 680.351026 2038.03125 NaN NaN NaN 0.027935 1.9006E-05 NaN NaN NaN NaN 117.75 0.68557 117.75 117.39 118.08 0 0 0 0 0.010302 1 77103 36.112 33.144 1 16808 661 6354 6503 26281 26281 IIHDFPQFYPLGIVQHD 17 0 0 Unmodified _IIHDFPQFYPLGIVQHD_ 0 0 0 B5MC59;A4D105;P35244 B5MC59 B5MC59 RPA3 Replication protein A 14 kDa subunit ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.3511 3 680.351026 2038.03125 NaN NaN NaN -0.15734 -0.00010705 NaN NaN NaN NaN 129.32 0.61931 129.32 129.07 129.69 0 0 0 0 0.0004985 1 78165 56.817 56.817 1 16809 661 6354 6503 26282 26282 IIHDFPQFYPLGIVQHD 17 0 0 Unmodified _IIHDFPQFYPLGIVQHD_ 0 0 0 B5MC59;A4D105;P35244 B5MC59 B5MC59 RPA3 Replication protein A 14 kDa subunit ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.6859 3 680.351026 2038.03125 NaN NaN NaN -0.37204 -0.00025312 NaN NaN NaN NaN 129.2 0.59431 129.2 128.86 129.46 0 0 0 0 0.031987 1 77111 27.271 23.237 1 16810 661 6354 6503 26283 26283 IIIEDLLEATR 11 0 1 Unmodified _IIIEDLLEATR_ 0 0 0 E1NZA1;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.3783 2 643.371735 1284.72892 76745.49 0.8945 0.0005755 0.31621 0.00020344 1.2107 0.00077894 643.371634892026 648.376423245679 119.65 0.57486 119.65 119.41 119.98 0 165 37 6 0 0 0 0.00036932 2 76974 83.883 54.601 1 1.6339 1.6314 0 16615000 7077700 9537600 16811 1205 6355 6504 26284;26285 26284 IIIEDLLEATR 11 0 1 Unmodified _IIIEDLLEATR_ 0 0 0 E1NZA1;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.377 2 643.371735 1284.72892 76220.84 0.90867 0.00058461 0.22527 0.00014493 1.1339 0.00072954 643.371764611518 648.375973455348 119.16 0.56192 119.16 118.94 119.5 7.6294E-06 179 38 6 0 0 0 3.1396E-05 1 78405 100.48 71.004 1 1.5907 1.6028 0 19498000 7036700 12461000 16812 1205 6355 6504 26286 26286 IIIEDLLEATR 11 0 1 Unmodified _IIIEDLLEATR_ 0 0 0 E1NZA1;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.3769 2 643.371735 1284.72892 76999.92 0.79537 0.00051172 -0.26015 -0.00016737 0.53523 0.00034435 643.371887936314 648.374851488253 131.72 0.55728 131.72 131.48 132.04 0 86 26 4 0 0 0 0.017321 1 80024 45.368 25.039 1 1.11 0.9794 0 1614800 838410 776390 16813 1205 6355 6504 26287 26287 IIIEELSLVAASPTLSPR 18 0 1 Unmodified _IIIEELSLVAASPTLSPR_ 0 0 0 Q16513;B1AL79;H0Y5V5;Q9UHS4 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.0611 2 955.053866 1908.09318 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.72 1 126.72 126.22 127.22 0 0 0 0 0.0045998 1 82481 50.562 40.014 1 16814 1769 6356 6505 26288 26288 IIIENKPK 8 2 0 Unmodified _IIIENKPK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.8029 2 477.80276 953.590967 87239.02 0.41375 0.00019769 -0.18397 -8.7901E-05 0.22978 0.00010979 477.802804430202 485.816723160655 22.387 1.1569 22.387 22.179 23.336 0 301 66 10 0 0 0 0.008672 1 8413 107.43 24.053 1 0.7188 0.84742 0 901400000 533140000 368260000 16815 1471 6357 6506 26289 26289 IIIENKPK 8 2 0 Unmodified _IIIENKPK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 318.871 3 318.870932 953.590967 104843.3 0.32236 0.00010279 0.64856 0.00020681 0.97092 0.0003096 318.871024094565 324.214204126321 22.384 1.3645 22.384 21.971 23.336 -1.9073E-06 313 77 9 0 0 0 0.020214 1 8439 40.067 16.996 1 0.99307 1.171 0 565070000 309120000 255950000 16816 1471 6357 6506 26290 26290 IIIENKPK 8 2 0 Unmodified _IIIENKPK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.8027 2 477.80276 953.590967 86556.15 0.23475 0.00011217 -0.47967 -0.00022919 -0.24492 -0.00011702 477.802741937531 485.816552080957 22.113 0.86146 22.113 21.945 22.806 0 213 38 10 0 0 0 0.017151 2 8093 97.602 38.403 1 0.7023 0.82344 0 1186700000 610350000 576330000 16817 1471 6357 6506 26291;26292 26291 IIIENKPK 8 2 0 Unmodified _IIIENKPK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 318.8707 3 318.870932 953.590967 105805.7 0.24954 7.9571E-05 -0.39686 -0.00012655 -0.14732 -4.6976E-05 318.87088782515 324.213617272532 22.143 1.0704 22.143 21.866 22.937 0 211 47 10 0 0 0 0.0038975 2 8110 69.198 40.98 1 0.75107 0.87895 0 737160000 435590000 301560000 16818 1471 6357 6506 26293;26294 26294 IIIENKPK 8 2 0 Unmodified _IIIENKPK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 318.8708 3 318.870932 953.590967 104431.2 -0.097191 -3.0991E-05 -0.24399 -7.7802E-05 -0.34118 -0.00010879 318.870971398468 324.21365769102 24.028 1.5684 24.028 23.762 25.33 0 348 85 9 0 0 0 0.022201 2 8311 40.002 24.34 1 1.3994 1.1838 0 91441000 36011000 55430000 16819 1471 6357 6506 26295;26296 26296 IIIENKPK 8 2 0 Unmodified _IIIENKPK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 477.8027 2 477.80276 953.590967 85194.73 0.16282 7.7798E-05 -0.50546 -0.00024151 -0.34264 -0.00016371 477.802772852366 485.816550686296 24.056 2.0708 24.056 23.872 25.943 -1.9073E-06 413 105 10 0 0 0 0.028337 1 8299 91.041 31.836 1 1.2863 1.0855 0 145860000 63035000 82828000 16820 1471 6357 6506 26297 26297 IIIENKPK 8 2 0 Unmodified _IIIENKPK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.817 2 477.80276 953.590967 86311.64 0.1982 9.4699E-05 -0.58239 -0.00027827 -0.38419 -0.00018357 477.802660170168 485.816565009824 23.882 2.1782 23.882 23.665 25.843 1.9073E-06 481 115 10 0 0 0 0.017151 1 7701 97.602 41.591 1 1.2809 1.0976 0 121520000 52912000 68605000 16821 1471 6357 6506 26298 26298 IIIENKPK 8 2 0 Unmodified _IIIENKPK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 318.8708 3 318.870932 953.590967 104903.1 -0.21098 -6.7274E-05 -0.18183 -5.7979E-05 -0.3928 -0.00012525 318.870948123294 324.213663052145 23.87 1.8461 23.87 23.665 25.511 0 393 102 10 0 0 0 0.030927 1 7702 33.263 20.735 1 1.3735 1.1733 0 71292000 27439000 43853000 16822 1471 6357 6506 26299 26299 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3125 2 477.305136 952.595718 88384.2 0.39691 0.00018945 0.64406 0.00030741 1.041 0.00049686 477.305253221154 481.312598168113 82.842 0.53049 82.842 82.481 83.012 0 144 42 5 0 0 0 0.030566 1 49407 51.854 19.014 1 2.2091 2.2328 0 18333000 6435900 11897000 16823 1037 6358 6507 26300 26300 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3057 2 477.305136 952.595718 87138.73 0.32156 0.00015348 0.25315 0.00012083 0.5747 0.00027431 477.305157633359 481.312296087716 92.38 1.0822 92.38 91.88 92.963 0 493 102 7 0 0 0 0.0078194 1 55972 81.297 0.85856 1 0.85222 0.99064 0 252070000 136810000 115260000 16824 1037 6358 6507 26301 26301 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3048 2 477.305136 952.595718 87697.38 0.32832 0.00015671 -0.045737 -2.183E-05 0.28258 0.00013488 477.30499314521 481.312144572686 123.56 2.8951 123.56 122.45 125.35 0 586 207 4 0 0 0 0.031924 1 79481 50.966 3.1173 1 0.82604 0.85526 0 11182000 6131800 5050200 16825 1037 6358 6507 26302 26302 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3051 2 477.305136 952.595718 88025.73 0.5207 0.00024853 -0.20129 -9.6075E-05 0.31942 0.00015246 477.304950193078 481.312045808025 130.51 1.3778 130.51 129.77 131.15 1.5259E-05 241 84 4 0 0 0 0.012091 2 84859 68.422 6.4223 1 0.81493 0.8077 0 8234000 4809000 3425000 16826 1037 6358 6507 26303;26304 26303 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 88025.75 0.43539 0.00020782 -0.075019 -3.5807E-05 0.36038 0.00017201 477.305024038461 481.312172575478 131.91 2.5249 131.91 130.86 133.39 0 427 149 4 0 0 0 0.012091 2 86246 68.422 6.7599 1 0.80814 0.82429 0 10422000 5598300 4824100 16827 1037 6358 6507 26305;26306 26306 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.305 2 477.305136 952.595718 87356.99 0.024788 1.1831E-05 -0.12576 -6.0025E-05 -0.10097 -4.8193E-05 477.304942595893 481.312106750812 138.26 0.67024 138.26 137.8 138.47 0 289 70 6 0 0 0 0.011011 1 89433 70.912 4.8395 1 0.83811 0.87191 0 11539000 6138600 5400100 16828 1037 6358 6507 26307 26307 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3127 2 477.305136 952.595718 NaN NaN NaN 0.23361 0.0001115 NaN NaN NaN NaN 93.354 0.56308 93.354 92.904 93.467 0 0 0 0 0.01789 1 56469 66.682 4.7196 1 NaN NaN 0 127670000 0 127670000 16829 1037 6358 6507 26308 26308 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN 0.30893 0.00014745 NaN NaN NaN NaN 94.472 1.2193 94.472 94.082 95.301 0 0 0 0 0.0087396 1 57501 79.597 4.3842 1 NaN NaN 0 84240000 0 84240000 16830 1037 6358 6507 26309 26309 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3127 2 477.305136 952.595718 NaN NaN NaN 0.082936 3.9586E-05 NaN NaN NaN NaN 114.98 1.2042 114.98 114.35 115.55 0 0 0 0 0.030461 1 73338 58.981 3.4506 1 NaN NaN 0 14505000 0 14505000 16831 1037 6358 6507 26310 26310 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3125 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.84 1 106.84 106.34 107.34 0 0 0 0 0.022142 1 66441 66.682 2.4174 1 16832 1037 6358 6507 26311 26311 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3128 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.73 1 129.73 129.23 130.23 0 0 0 0 0.03446 1 84546 60.76 0.28237 1 16833 1037 6358 6507 26312 26312 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3056 2 477.305136 952.595718 87456.73 0.27108 0.00012939 0.2332 0.00011131 0.50428 0.0002407 477.305134600656 481.31223923917 92.573 2.1262 92.573 91.285 93.411 0 601 183 6 0 0 0 0.040892 1 57411 47.067 2.6199 1 0.85987 1.005 0 285600000 151770000 133820000 16834 1037 6358 6507 26313 26313 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.305 2 477.305136 952.595718 87587.45 0.15811 7.5465E-05 0.49504 0.00023629 0.65315 0.00031175 477.305253098152 481.312337456197 93.645 0.66655 93.645 93.071 93.738 7.6294E-06 282 60 7 0 0 0 0.010479 1 57958 72.138 0.75894 1 0.8649 1.0043 0 226410000 123620000 102790000 16835 1037 6358 6507 26314 26314 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 87456.73 0.23662 0.00011294 0.085946 4.1022E-05 0.32257 0.00015396 477.305083546598 481.312180237524 100.43 2.2535 100.43 99.337 101.59 -7.6294E-06 489 181 6 0 0 0 0.0082133 2 62874 79.597 7.7276 1 0.81851 0.91721 0 80577000 44077000 36500000 16836 1037 6358 6507 26315;26316 26316 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3053 2 477.305136 952.595718 87587.41 0.31605 0.00015085 0.047072 2.2468E-05 0.36312 0.00017332 477.305083259691 481.312152582574 105.3 1.5401 105.3 104.04 105.58 0 431 118 5 0 0 0 0.026448 1 66362 54.549 3.3566 1 0.84754 0.95457 0 69325000 36908000 32417000 16837 1037 6358 6507 26317 26317 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3052 2 477.305136 952.595718 87368.85 0.18886 9.0145E-05 -0.072691 -3.4696E-05 0.11617 5.5449E-05 477.305114903558 481.312566459862 136.86 0.98032 136.86 136.29 137.27 0 299 108 6 0 0 0 0.040892 1 90950 47.067 3.8206 1 0.64322 0.66321 0 9629000 5738100 3891000 16838 1037 6358 6507 26318 26318 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3051 2 477.305136 952.595718 86691.96 -0.097717 -4.6641E-05 0.24551 0.00011718 0.14779 7.0543E-05 477.305196168421 481.312218201553 142.53 3.4026 142.53 141.5 144.9 0 1431 378 7 0 0 0 0.024215 1 92022 56.011 5.4039 1 0.83877 0.85977 0 31915000 17389000 14526000 16839 1037 6358 6507 26319 26319 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3052 2 477.305136 952.595718 NaN NaN NaN -0.065955 -3.1481E-05 NaN NaN NaN NaN 122.35 0.6655 122.35 121.85 122.52 7.6294E-06 0 0 0 0.01789 1 81192 66.682 0.33089 1 NaN NaN 0 6319700 6319700 0 16840 1037 6358 6507 26320 26320 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3054 2 477.305136 952.595718 NaN NaN NaN 0.11948 5.7028E-05 NaN NaN NaN NaN 141.29 1.0809 141.29 140.97 142.05 0 0 0 0 0.03531 1 91892 56.011 1.8535 1 NaN NaN 0 3918600 3918600 0 16841 1037 6358 6507 26321 26321 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.94 1 103.94 103.44 104.44 -7.6294E-06 0 0 0 0.041785 1 65801 57.281 3.3131 1 16842 1037 6358 6507 26322 26322 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.312 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 138.95 1 138.95 138.45 139.45 0 0 0 0 0.050341 1 91425 54.549 3.9426 1 16843 1037 6358 6507 26323 26323 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.3124 2 477.305136 952.595718 87205.89 0.51762 0.00024706 -0.038502 -1.8377E-05 0.47912 0.00022868 477.305018912956 481.312111077842 112.06 6.2008 112.06 111.8 118 -7.6294E-06 936 293 6 0 0 0 0.019676 10 66128 58.981 7.7276 1 0.84089 0.66539 0 10477000 5909700 4567500 16844 1037 6358 6507 26324;26325;26326;26327;26328;26329;26330;26331;26332;26333 26326 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.3124 2 477.305136 952.595718 87410.86 0.49973 0.00023852 -0.021482 -1.0254E-05 0.47825 0.00022827 477.305004820446 481.312118309719 119.26 1.1103 119.26 118.86 119.97 -7.6294E-06 153 50 4 0 0 0 0.024215 2 71117 56.011 4.2244 1 0.80937 0.6366 0 3991900 1857500 2134300 16845 1037 6358 6507 26334;26335 26335 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 477.3053 2 477.305136 952.595718 87500.99 0.18681 8.9167E-05 0.17301 8.2579E-05 0.35982 0.00017175 477.305121414315 481.312215230233 120.54 1.2039 120.54 119.61 120.81 0 180 57 6 0 0 0 0.04808 1 71546 44.447 3.418 1 0.81098 0.64134 0 4150800 2345300 1805500 16846 1037 6358 6507 26336 26336 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 477.3054 2 477.305136 952.595718 NaN NaN NaN 0.54376 0.00025954 NaN NaN NaN NaN 99.808 12.272 99.808 99.585 111.86 0 0 0 0 0.01789 8 57821 66.682 6.0922 1 NaN NaN 0 2208000000 2208000000 0 16847 1037 6358 6507 26337;26338;26339;26340;26341;26342;26343;26344 26338 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.3124 2 477.305136 952.595718 87796.81 0.50372 0.00024043 -0.23735 -0.00011329 0.26637 0.00012714 477.304879625188 481.312019312555 119.21 1.7622 119.21 118.16 119.92 0 252 80 4 0 0 0 0.042651 1 69471 46.426 3.8272 1 0.80036 0.65603 0 5032100 2521300 2510800 16848 1037 6358 6507 26345 26345 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 477.3052 2 477.305136 952.595718 88313.8 0.63209 0.0003017 -0.24918 -0.00011893 0.38292 0.00018277 477.304919010402 481.312036349526 128.73 2.5019 128.73 127.68 130.18 0 329 102 5 0 0 0 0.063595 1 77714 38.792 2.3965 1 0.81821 0.66312 0 2676600 1395900 1280700 16849 1037 6358 6507 26346 26346 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.3123 2 477.305136 952.595718 88220.23 0.87067 0.00041558 -0.39524 -0.00018865 0.47544 0.00022693 477.304830778619 481.311912241528 133.41 2.5008 133.41 131.69 134.19 0 358 110 6 0 0 0 0.030669 2 80055 51.787 4.7054 1 0.84576 0.66206 0 3364300 1823300 1541000 16850 1037 6358 6507 26347;26348 26347 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 477.3065 2 477.305136 952.595718 NaN NaN NaN 0.38929 0.00018581 NaN NaN NaN NaN 99.606 20.916 99.606 97.484 118.4 0 0 0 0 0.01789 9 56275 66.682 7.7013 1 NaN NaN 0 2151800000 2151800000 0 16851 1037 6358 6507 26349;26350;26351;26352;26353;26354;26355;26356;26357 26350 IIIPEIQK 8 1 0 Unmodified _IIIPEIQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 477.305 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 139.07 1 139.07 138.57 139.57 0 0 0 0 0.045764 1 83276 56.011 2.5447 1 16852 1037 6358 6507 26358 26358 IIITVVEEQEQK 12 1 0 Unmodified _IIITVVEEQEQK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.9007 2 714.900857 1427.78716 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.963 1 78.963 78.463 79.463 0 0 0 0 0.0068724 1 46800 61.353 32.267 1 16853 1754 6359 6508 26359 26359 IIITVVEEQEQK 12 1 0 Unmodified _IIITVVEEQEQK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.9017 2 714.900857 1427.78716 NaN NaN NaN 0.1938 0.00013855 NaN NaN NaN NaN 77.885 0.36488 77.885 77.616 77.981 7.6294E-06 0 0 0 2.9713E-08 1 47102 109.79 109.79 1 NaN NaN 0 12764000 12764000 0 16854 1754 6359 6508 26360 26360 IIITVVEEQEQK 12 1 0 Unmodified _IIITVVEEQEQK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.9086 2 714.900857 1427.78716 72486.69 0.57687 0.00041241 -0.19919 -0.0001424 0.37769 0.00027001 714.900932457776 718.907739749787 90.132 0.59869 90.132 89.8 90.399 0 217 43 6 0 0 0 0.0010242 2 49986 62.303 62.303 1 2.551 2.0287 0 6627500 1962600 4664900 16855 1754 6359 6508 26361;26362 26362 IIITVVEEQEQK 12 1 0 Unmodified _IIITVVEEQEQK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.9025 2 714.900857 1427.78716 72116.15 0.47264 0.00033789 0.037817 2.7035E-05 0.51046 0.00036493 714.901236129574 718.907913987135 90.034 0.59463 90.034 89.69 90.284 0 184 39 6 0 0 0 0.0047147 2 49056 52.79 52.79 1 2.183 1.7882 0 5406700 1531500 3875100 16856 1754 6359 6508 26363;26364 26363 IILDEAHNVK 10 1 0 Unmodified _IILDEAHNVK_ 0 0 0 A0A024R0F1;Q9UNY4;Q59EG6 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 384.5519 3 384.552151 1150.63462 96758.29 0.46261 0.0001779 0.034507 1.327E-05 0.49712 0.00019117 384.552126227893 387.223632203058 38.742 0.45483 38.742 38.513 38.968 0 166 37 6 0 0 0 0.0017886 2 19910 59.645 42.425 1 0.81267 0.87556 0 37924000 21168000 16756000 16857 44 6360 6509 26365;26366 26365 IILDEAHNVK 10 1 0 Unmodified _IILDEAHNVK_ 0 0 0 A0A024R0F1;Q9UNY4;Q59EG6 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 384.5522 3 384.552151 1150.63462 96276.23 0.035075 1.3488E-05 0.12642 4.8614E-05 0.16149 6.2102E-05 384.552162840373 387.223538129239 37.608 0.41434 37.608 37.381 37.795 0 169 32 7 0 0 0 0.0092974 2 19482 42.718 34.055 1 0.8033 0.86525 0 37878000 23249000 14628000 16858 44 6360 6509 26367;26368 26368 IILDLISESPIK 12 1 0 Unmodified _IILDLISESPIK_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.9133 2 670.905411 1339.79627 74651.1 0.87349 0.00058603 0.18269 0.00012257 1.0562 0.00070859 670.905486041737 674.912492105371 120.54 1.2314 120.54 120.24 121.47 0 431 84 10 0 0 0 4.2647E-08 3 77550 115.78 115.78 1 1.6878 1.9055 0 108940000 41423000 67516000 16859 102 6361 6510 26369;26370;26371 26369 IILDLISESPIK 12 1 0 Unmodified _IILDLISESPIK_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.907 2 670.905411 1339.79627 74678.3 0.98198 0.00065882 0.11276 7.5654E-05 1.0947 0.00073447 670.905471187224 674.912446206244 120.04 1.2548 120.04 119.72 120.97 0 416 90 9 0 0 0 7.0704E-06 4 79084 109.42 109.42 1 1.6747 1.8949 0 133560000 51030000 82529000 16860 102 6361 6510 26372;26373;26374;26375 26372 IILDLISESPIK 12 1 0 Unmodified _IILDLISESPIK_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.9139 2 670.905411 1339.79627 73895.11 1.1587 0.0007774 0.11842 7.9448E-05 1.2771 0.00085685 670.905339590337 674.912251086477 132.76 0.97432 132.76 132.49 133.47 0 176 44 8 0 0 0 7.0704E-06 3 80721 109.42 109.42 1 1.2158 0.94537 0 12527000 6108000 6419400 16861 102 6361 6510 26376;26377;26378 26376 IILDLISESPIK 12 1 0 Unmodified _IILDLISESPIK_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.913 2 670.905411 1339.79627 74854.61 1.1901 0.00079845 -0.16693 -0.000112 1.0232 0.00068645 670.905298686709 674.912100943497 132.51 0.91785 132.51 132.27 133.19 0 173 40 8 0 0 0 7.8154E-13 2 79627 132.78 132.78 1 1.0027 0.82485 0 12209000 5688200 6520500 16862 102 6361 6510 26379;26380 26379 IILEAEK 7 1 0 Unmodified _IILEAEK_ 0 0 0 C9J931;Q6NZ61;A8K005;A0A090N900;Q15382 C9J931 C9J931 RHEB GTP-binding protein Rheb ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 412.2542 2 408.247286 814.48002 NaN NaN NaN -0.20646 -8.4289E-05 NaN NaN NaN NaN 40.773 0.563 40.773 40.565 41.128 3.8147E-06 0 0 0 0.032753 1 21339 81.297 20.509 1 NaN NaN 0 15070000 0 15070000 16863 459 6362 6511 26381 26381 IILLAEGR 8 0 1 Unmodified _IILLAEGR_ 0 0 0 P23526;Q1RMG2 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.7854 2 442.781828 883.549102 91847.23 -0.031117 -1.3778E-05 -0.4129 -0.00018283 -0.44402 -0.0001966 442.781736018912 447.785348526672 72.783 0.72399 72.783 72.35 73.074 0 228 53 8 0 0 0 0.029728 1 42484 52.403 4.6598 1 0.72669 0.81425 0 90403000 52116000 38287000 16864 1512 6363 6512 26382 26382 IILLAEGR 8 0 1 Unmodified _IILLAEGR_ 0 0 0 P23526;Q1RMG2 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.7856 2 442.781828 883.549102 91194.42 -0.22763 -0.00010079 -0.16427 -7.2738E-05 -0.3919 -0.00017353 442.781890258267 447.785520596283 71.421 0.69254 71.421 71.004 71.696 0 194 50 8 0 0 0 0.01993 2 42685 58.815 10.899 1 0.80291 0.91383 0 127620000 71024000 56596000 16865 1512 6363 6512 26383;26384 26383 IILLFDAHK 9 1 0 Unmodified _IILLFDAHK_ 0 0 0 B2R5U3;A0A024R571;Q9H4M9;C9JC03;B4DZH9;B4DMV9;B4DR44;B4DTR4;Q9NZN3;C9JDQ8;C9J2Z4;A8K9B9;A0A024R9N6;Q9H223 B2R5U3;A8K9B9 A8K9B9 EHD1;EHD3;EHD4 EH domain-containing protein 1;EH domain-containing protein 3;EH domain-containing protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 359.8896 3 357.218332 1068.63317 NaN NaN NaN -0.25449 -9.0909E-05 NaN NaN NaN NaN 84.175 0.32379 84.175 84.038 84.362 -7.6294E-06 0 0 0 0.045504 1 51630 31.494 16.343 1 NaN NaN 0 5636000 0 5636000 16866 284;172 6364 6513 26385 26385 IILPPEK 7 1 0 Unmodified _IILPPEK_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 409.2671 2 405.260197 808.50584 96205.07 -0.14759 -5.9812E-05 0.5293 0.0002145 0.38171 0.00015469 405.260353381337 409.267350115702 53.029 1.2594 53.029 52.41 53.669 -3.8147E-06 294 94 5 0 0 0 0.032931 1 29816 64.757 37.637 1 1.8659 2.085 0 63114000 20950000 42163000 16867 1580 6365 6514 26386 26386 IILPPEK 7 1 0 Unmodified _IILPPEK_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 409.2672 2 405.260197 808.50584 96628.81 -0.071345 -2.8913E-05 0.28066 0.00011374 0.20932 8.4828E-05 405.260255625887 409.267286361042 51.523 1.2853 51.523 51.089 52.375 0 376 100 5 0 0 0 0.032931 1 29579 64.757 44.911 1 1.9147 2.1481 0 77574000 27942000 49632000 16868 1580 6365 6514 26387 26387 IILSDEGK 8 1 0 Unmodified _IILSDEGK_ 0 0 0 H0YE88;P28347;H0YEJ9;H0YGS2;A0A0A0MRF3;Q96G15;Q53GI4;Q71U35;A0A024QZE2;A0A024QZD8;Q15561;Q99594;Q15562;H0Y7B0;H0YCZ6 H0YE88 H0YE88 TEAD1;TEAD4;TEAD3;TEAD2 Transcriptional enhancer factor TEF-1;Transcriptional enhancer factor TEF-3;Transcriptional enhancer factor TEF-5;Transcriptional enhancer factor TEF-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.7557 2 437.74765 873.480748 94761.49 0.49273 0.00021569 0.76577 0.00033521 1.2585 0.00055091 437.747944696509 441.754794549036 34.398 0.8058 34.398 33.992 34.798 0 225 61 6 0 0 0 0.014196 2 17330 63.565 39.362 1 0.70176 0.7107 0 29205000 15026000 14178000 16869 1291 6366 6515 26388;26389 26389 IILSDEGK 8 1 0 Unmodified _IILSDEGK_ 0 0 0 H0YE88;P28347;H0YEJ9;H0YGS2;A0A0A0MRF3;Q96G15;Q53GI4;Q71U35;A0A024QZE2;A0A024QZD8;Q15561;Q99594;Q15562;H0Y7B0;H0YCZ6 H0YE88 H0YE88 TEAD1;TEAD4;TEAD3;TEAD2 Transcriptional enhancer factor TEF-1;Transcriptional enhancer factor TEF-3;Transcriptional enhancer factor TEF-5;Transcriptional enhancer factor TEF-4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 441.7545 2 437.74765 873.480748 91472.41 -0.20549 -8.9955E-05 0.87788 0.00038429 0.67239 0.00029434 437.747958629251 441.754811937597 39.598 0.90151 39.598 39.264 40.165 0 274 71 6 0 0 0 0.04994 1 17561 43.769 21.638 1 1.0343 0.84238 0 4581100 2316500 2264600 16870 1291 6366 6515 26390 26390 IIMYDQNHLLGR 12 0 1 Oxidation (M) _IIM(ox)YDQNHLLGR_ IIM(1)YDQNHLLGR IIM(75.57)YDQNHLLGR 0 1 0 A8K6X9;Q6PD62;H0YCE8 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2615 3 496.925771 1487.75548 87510.23 0.22045 0.00010955 0.036022 1.79E-05 0.25647 0.00012745 496.926079985403 500.261852711002 61.362 0.84111 61.362 61.009 61.851 -3.8147E-06 138 79 5 0 0 0 4.6688E-05 1 36070 75.566 70.389 1 2.3944 2.3998 0 18198000 6625100 11573000 16871 765 6367 6516 26391 26391 592 IINDLLQSLR 10 0 1 Unmodified _IINDLLQSLR_ 0 0 0 A0A087WTP3;Q92945 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.8578 2 592.853512 1183.69247 80558.14 0.86261 0.0005114 0.070589 4.1849E-05 0.9332 0.00055325 592.853792441427 597.857358372803 107.19 0.74806 107.19 106.85 107.59 0 145 57 4 0 0 0 0.0014097 1 66632 84.213 51.892 1 1.984 1.9909 0 7913500 3374900 4538700 16872 403 6368 6517 26392 26392 IINDLLQSLR 10 0 1 Unmodified _IINDLLQSLR_ 0 0 0 A0A087WTP3;Q92945 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.8536 2 592.853512 1183.69247 80694.62 0.94184 0.00055838 0.077625 4.602E-05 1.0195 0.0006044 592.853724860238 597.85737978642 106.44 0.62477 106.44 106.16 106.78 7.6294E-06 150 47 5 0 0 0 1.5031E-06 2 67834 111.61 72.585 1 1.5007 1.5169 0 9804000 4673300 5130700 16873 403 6368 6517 26393;26394 26394 IINDNATYCR 10 0 1 Unmodified _IINDNATYCR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.2976 2 620.292962 1238.57137 74490.11 0.94382 0.00058544 -0.20349 -0.00012622 0.74033 0.00045922 620.292956708528 625.297037446504 28.685 0.47812 28.685 28.525 29.003 0 132 25 8 0 0 0 1.3101E-22 3 13589 171.56 117.6 1 0.76826 0.8977 0 201610000 123210000 78406000 16874 785 6369 6518 26395;26396;26397 26396 IINDNATYCR 10 0 1 Unmodified _IINDNATYCR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.2917 2 620.292962 1238.57137 75032.85 0.36584 0.00022693 -0.26798 -0.00016623 0.097862 6.0703E-05 620.292753149266 625.297145927844 28.045 0.44556 28.045 27.757 28.203 1.9073E-06 138 24 9 0 0 0 4.9739E-16 2 13171 151.44 118.55 1 0.71642 0.82813 0 259620000 160170000 99445000 16875 785 6369 6518 26398;26399 26398 IINDNATYCR 10 0 1 Unmodified _IINDNATYCR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.2934 2 620.292962 1238.57137 74980.42 0.27885 0.00017297 -0.49182 -0.00030507 -0.21297 -0.0001321 620.292980306975 625.296808616512 32.604 0.52466 32.604 32.43 32.955 0 159 25 10 0 0 0 5.3605E-65 2 14109 215.38 161.23 1 0.94143 0.81331 0 98494000 50101000 48393000 16876 785 6369 6518 26400;26401 26401 IINDNATYCR 10 0 1 Unmodified _IINDNATYCR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.297 2 620.292962 1238.57137 75713.76 0.44514 0.00027612 -0.35982 -0.0002232 0.085317 5.2922E-05 620.293089546777 625.296823775403 32.759 0.70709 32.759 32.506 33.213 0 127 39 8 0 0 0 1.2241E-05 2 13686 103.55 84.169 1 0.98439 0.85897 0 62825000 32280000 30546000 16877 785 6369 6518 26402;26403 26402 IINEPTAAAIAYGLDK 16 1 0 Unmodified _IINEPTAAAIAYGLDK_ 0 0 0 V9HWB4;P11021;B4DEF7;E9PN89;V9HW22;P11142;E9PKE3;Q53HF2;Q96IS6;B3KTV0;B4E1Q1;E9PLF4;B4DTX2;A0A024R6B5;P54652;E9PI65 V9HWB4;E9PN89;V9HW22 V9HW22 HEL-S-89n;HSPA5;HSPA8;HEL-S-72p;HSPA2 78 kDa glucose-regulated protein;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.4623 2 830.451245 1658.88794 66236.94 0.99433 0.00082575 -0.10964 -9.1052E-05 0.88469 0.00073469 830.451455601762 834.458478218142 102.06 1.2925 102.06 101.37 102.66 0 708 103 12 0 0 0 6.4912E-09 2 62447 109 97.111 1 1.2699 1.4664 0 221730000 102120000 119620000 16878 1467;1466;1248 6370 6519 26404;26405 26404 IINEPTAAAIAYGLDK 16 1 0 Unmodified _IINEPTAAAIAYGLDK_ 0 0 0 V9HWB4;P11021;B4DEF7;E9PN89;V9HW22;P11142;E9PKE3;Q53HF2;Q96IS6;B3KTV0;B4E1Q1;E9PLF4;B4DTX2;A0A024R6B5;P54652;E9PI65 V9HWB4;E9PN89;V9HW22 V9HW22 HEL-S-89n;HSPA5;HSPA8;HEL-S-72p;HSPA2 78 kDa glucose-regulated protein;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.4514 2 830.451245 1658.88794 66470.41 0.78986 0.00065594 -0.14623 -0.00012144 0.64363 0.00053451 830.451349837517 834.458365912522 101.19 1.31 101.19 100.57 101.88 0 760 103 12 0 0 0 5.1587E-26 2 63451 150.21 134.68 1 1.2669 1.4889 0 359440000 158660000 200780000 16879 1467;1466;1248 6370 6519 26406;26407 26407 IINEPTAAAIAYGLDK 16 1 0 Unmodified _IINEPTAAAIAYGLDK_ 0 0 0 V9HWB4;P11021;B4DEF7;E9PN89;V9HW22;P11142;E9PKE3;Q53HF2;Q96IS6;B3KTV0;B4E1Q1;E9PLF4;B4DTX2;A0A024R6B5;P54652;E9PI65 V9HWB4;E9PN89;V9HW22 V9HW22 HEL-S-89n;HSPA5;HSPA8;HEL-S-72p;HSPA2 78 kDa glucose-regulated protein;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.4519 2 830.451245 1658.88794 67680.84 0.48209 0.00040035 0.29506 0.00024504 0.77715 0.00064539 830.952827455649 834.45896045538 101.96 0.30199 101.96 101.86 102.17 0 59 22 5 0 0 0 0.015623 1 64354 30.872 24.632 1 1.1699 1.1818 0 8433100 3347100 5086000 16880 1467;1466;1248 6370 6519 26408 26408 IINEPTAAAIAYGLDK 16 1 0 Unmodified _IINEPTAAAIAYGLDK_ 0 0 0 V9HWB4;P11021;B4DEF7;E9PN89;V9HW22;P11142;E9PKE3;Q53HF2;Q96IS6;B3KTV0;B4E1Q1;E9PLF4;B4DTX2;A0A024R6B5;P54652;E9PI65 V9HWB4;E9PN89;V9HW22 V9HW22 HEL-S-89n;HSPA5;HSPA8;HEL-S-72p;HSPA2 78 kDa glucose-regulated protein;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 830.4534 2 830.451245 1658.88794 63936.21 0.95858 0.00079606 0.15213 0.00012634 1.1107 0.00092239 830.451482709479 834.458540813956 114.41 1.2548 114.41 114.14 115.39 0 339 55 12 0 0 0 1.4318E-12 2 66862 122.45 113.13 1 1.2802 1.1018 0 91818000 39197000 52620000 16881 1467;1466;1248 6370 6519 26409;26410 26409 IINEPTAAAIAYGLDK 16 1 0 Unmodified _IINEPTAAAIAYGLDK_ 0 0 0 V9HWB4;P11021;B4DEF7;E9PN89;V9HW22;P11142;E9PKE3;Q53HF2;Q96IS6;B3KTV0;B4E1Q1;E9PLF4;B4DTX2;A0A024R6B5;P54652;E9PI65 V9HWB4;E9PN89;V9HW22 V9HW22 HEL-S-89n;HSPA5;HSPA8;HEL-S-72p;HSPA2 78 kDa glucose-regulated protein;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 834.46 2 830.451245 1658.88794 64292.9 0.79326 0.00065876 -0.040305 -3.3472E-05 0.75295 0.00062529 830.451434443569 834.458444037082 114.26 1.3046 114.26 113.98 115.28 0 297 57 12 0 0 0 2.8092E-12 2 65823 119.69 110.96 1 1.3002 1.1096 0 99164000 42156000 57009000 16882 1467;1466;1248 6370 6519 26411;26412 26412 IINEPTAAAIAYGLDR 16 0 1 Unmodified _IINEPTAAAIAYGLDR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.4547 2 844.454319 1686.89408 65682.87 0.61174 0.00051659 -0.10445 -8.8207E-05 0.50729 0.00042838 844.454257328666 849.458426885348 104.02 1.0335 104.02 103.58 104.62 -7.6294E-06 539 84 8 0 0 0 1.4195E-17 4 64123 131.26 106.4 1 0.77219 0.88959 0 149740000 81782000 67955000 16883 533;845 6371 6520 26413;26414;26415;26416 26414 IINEPTAAAIAYGLDR 16 0 1 Unmodified _IINEPTAAAIAYGLDR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.4554 2 844.454319 1686.89408 65921.76 0.74862 0.00063218 0.30421 0.00025689 1.0528 0.00088907 844.454652282409 849.459000251449 103.38 0.87686 103.38 102.92 103.79 0 443 72 9 0 0 0 3.5565E-18 2 65228 136.27 101.74 1 0.78987 0.9119 0 244960000 142080000 102870000 16884 533;845 6371 6520 26417;26418 26418 IINEPTAAAIAYGLDR 16 0 1 Unmodified _IINEPTAAAIAYGLDR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.4618 2 844.454319 1686.89408 66164.55 0.89034 0.00075185 -0.16578 -0.00014 0.72456 0.00061186 844.454215737545 849.458320385652 116.03 0.73049 116.03 115.75 116.48 0 167 30 9 0 0 0 3.4696E-12 2 68009 118.37 93.512 1 1.0792 0.92796 0 45998000 21579000 24420000 16885 533;845 6371 6520 26419;26420 26419 IINEPTAAAIAYGLDR 16 0 1 Unmodified _IINEPTAAAIAYGLDR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSP70-1;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 844.4551 2 844.454319 1686.89408 64140.48 0.8515 0.00071905 -0.10989 -9.2798E-05 0.74161 0.00062626 844.454334437659 849.458380648084 115.9 1.0619 115.9 115.47 116.53 7.6294E-06 212 49 9 0 0 0 1.8989E-25 2 67011 149.26 124.4 1 1.118 0.97529 0 45745000 21959000 23786000 16886 533;845 6371 6520 26421;26422 26422 IINYANSSDPTSGVSK 16 1 0 Unmodified _IINYANSSDPTSGVSK_ 0 0 0 V9HWD1;B3KNK0;Q4W5G0 V9HWD1 V9HWD1 HEL106;TIGD2 Tigger transposable element-derived protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.4211 2 826.909941 1651.80533 NaN NaN NaN 1.0611 0.00087745 NaN NaN NaN NaN 56.814 0.35569 56.814 56.669 57.025 3.8147E-06 0 0 0 0.010855 1 28668 47.189 38 1 NaN NaN 0 879180 0 879180 16887 914 6372 6521 26423 26423 IIPEITAMK 9 1 0 Oxidation (M) _IIPEITAM(ox)K_ IIPEITAM(1)K IIPEITAM(52.79)K 0 1 0 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.3019 2 516.293911 1030.57327 88771.71 0.82174 0.00042426 -0.025053 -1.2935E-05 0.79668 0.00041132 516.293554489753 520.301262127324 60.402 0.7033 60.402 60.098 60.801 0 168 63 5 0 0 0 0.0085458 1 34441 52.786 33.082 1 0.96847 1.004 0 29373000 14166000 15207000 16888 1679 6373 6522 26424 26424 1485 IIPEITAMK 9 1 0 Oxidation (M) _IIPEITAM(ox)K_ IIPEITAM(1)K IIPEITAM(48.28)K 0 1 0 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.2936 2 516.293911 1030.57327 86376.75 0.48694 0.0002514 0.071495 3.6912E-05 0.55843 0.00028831 516.293679184854 520.301189811865 59.185 0.40918 59.185 59.014 59.423 0 141 36 5 0 0 0 0.011814 2 34392 48.283 23.36 1 0.92089 0.9882 0 37311000 18837000 18474000 16889 1679 6373 6522 26425;26426 26425 1485 IIPGFMCQGGDFTR 14 0 1 Oxidation (M) _IIPGFM(ox)CQGGDFTR_ IIPGFM(1)CQGGDFTR IIPGFM(66.26)CQGGDFTR 0 1 0 V9HWF5;A8K486;P62937;B4DM82;B2RE56;F8WE65;C9J5S7;Q71V99;P0DN26;A0A0H2UH34;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284 V9HWF5 V9HWF5 HEL-S-69p;PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.8813 2 807.873793 1613.73303 NaN NaN NaN -0.48421 -0.00039118 NaN NaN NaN NaN 84.318 0.54021 84.318 83.996 84.537 0 0 0 0 0.00070671 1 50449 66.262 49.631 1 NaN NaN 0 11216000 0 11216000 16890 731 6374 6523 26427 26427 566 IIPGFMCQGGDFTR 14 0 1 Oxidation (M) _IIPGFM(ox)CQGGDFTR_ IIPGFM(1)CQGGDFTR IIPGFM(48)CQGGDFTR 0 1 0 V9HWF5;A8K486;P62937;B4DM82;B2RE56;F8WE65;C9J5S7;Q71V99;P0DN26;A0A0H2UH34;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284 V9HWF5 V9HWF5 HEL-S-69p;PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.3804 2 807.873793 1613.73303 NaN NaN NaN -0.082044 -6.6281E-05 NaN NaN NaN NaN 83.914 0.657 83.914 83.477 84.134 0 0 0 0 0.0049909 1 51535 48.004 42.032 1 NaN NaN 0 14688000 0 14688000 16891 731 6374 6523 26428 26428 566 IIPKPEFPR 9 1 1 Unmodified _IIPKPEFPR_ 0 0 1 X6RJ73;Q96A35 X6RJ73 X6RJ73 MRPL24 39S ribosomal protein L24, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 366.2219 3 366.221965 1095.64407 100388 -0.0052219 -1.9124E-06 -0.04724 -1.73E-05 -0.052462 -1.9213E-05 366.221762273032 372.229454868307 57.251 0.60745 57.251 56.994 57.602 -3.8147E-06 155 46 5 0 0 0 0.0058969 2 33100 57.859 54.72 1 1.1349 1.2882 0 17634000 8456600 9177700 16892 1957 6375 6524 26429;26430 26430 IIPLYSTLPPQQQQR 15 0 1 Unmodified _IIPLYSTLPPQQQQR_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.0059 2 891.499061 1780.98357 65095.72 0.92878 0.000828 -0.022031 -1.964E-05 0.90675 0.00080836 891.498863354584 897.004823469334 93.233 1.2684 93.233 92.511 93.779 0 408 111 6 0 0 0 0.00021973 4 56749 72.434 59.638 1 1.187 1.2576 0 41498000 21164000 20334000 16893 1379 6376 6525 26431;26432;26433;26434 26434 IIPLYSTLPPQQQQR 15 0 1 Unmodified _IIPLYSTLPPQQQQR_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 891.4991 2 891.499061 1780.98357 64945.47 0.66111 0.00058938 -0.13187 -0.00011756 0.52924 0.00047182 891.498905020224 897.004682746987 92.436 1.2343 92.436 91.697 92.932 0 454 104 6 0 0 0 3.8867E-06 3 57338 97.597 85.676 1 1.0564 1.2279 0 62899000 27005000 35895000 16894 1379 6376 6525 26435;26436;26437 26436 IIPLYSTLPPQQQQR 15 0 1 Unmodified _IIPLYSTLPPQQQQR_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.5 2 891.499061 1780.98357 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.756 1 92.756 92.256 93.256 0 0 0 0 0.0030825 1 57504 55.353 37.766 1 16895 1379 6376 6525 26438 26438 IIPLYSTLPPQQQQR 15 0 1 Unmodified _IIPLYSTLPPQQQQR_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.5005 2 891.499061 1780.98357 65616.41 0.52914 0.00047173 -0.1302 -0.00011607 0.39894 0.00035565 892.000683013754 896.502536045124 106.21 1.1958 106.21 105.63 106.82 0 361 65 8 0 0 0 0.016724 3 60889 32.498 27.607 1 1.1525 0.99219 0 7396900 3511500 3885400 16896 1379 6376 6525 26439;26440;26441 26439 IIPLYSTLPPQQQQR 15 0 1 Unmodified _IIPLYSTLPPQQQQR_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 891.4993 2 891.499061 1780.98357 65297.96 0.29026 0.00025876 0.16237 0.00014475 0.45263 0.00040352 891.499252293571 896.502989393995 106.04 1.2458 106.04 105.41 106.66 0 417 80 7 0 0 0 0.003912 4 59831 40.727 39.785 1 1.243 1.036 0 6378200 3138700 3239600 16897 1379 6376 6525 26442;26443;26444;26445 26443 IIPQCIAR 8 0 1 Unmodified _IIPQCIAR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.7832 2 485.778762 969.542971 86959.68 0.18682 9.0754E-05 0.14671 7.1268E-05 0.33353 0.00016202 485.779013012314 490.78309797925 48.051 0.53344 48.051 47.8 48.334 0 177 46 5 0 0 0 0.025086 1 26101 55.441 26.103 1 0.98284 1.0095 0 19436000 9639000 9797500 16898 2048 6377 6526 26446 26446 IIQAAINSDGGQPEIK 16 1 0 Unmodified _IIQAAINSDGGQPEIK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.9453 2 827.443951 1652.87335 NaN NaN NaN 0.45461 0.00037617 NaN NaN NaN NaN 67.258 0.48133 67.258 67.054 67.535 0 0 0 0 1.0393E-08 1 38812 123.95 94.991 1 NaN NaN 0 9954200 9954200 0 16899 1680 6378 6527 26447 26447 IIQAAINSDGGQPEIK 16 1 0 Unmodified _IIQAAINSDGGQPEIK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.4446 2 827.443951 1652.87335 68874.44 0.66707 0.00055196 -0.12945 -0.00010711 0.53762 0.00044485 827.443977230923 831.450814536749 66.149 0.50646 66.149 65.969 66.475 0 174 41 6 0 0 0 1.7553E-24 2 39048 138.45 103.92 1 0.88034 0.9069 0 18137000 8124200 10013000 16900 1680 6378 6527 26448;26449 26448 IIQAAINSDGGQPEIK 16 1 0 Unmodified _IIQAAINSDGGQPEIK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.4451 2 827.443951 1652.87335 66692.84 0.55303 0.0004576 0.043524 3.6013E-05 0.59655 0.00049361 827.945414765471 831.952803548886 77.133 0.61008 77.133 76.881 77.491 0 214 41 7 0 0 0 0.00015342 2 41202 67.997 56.131 1 1.8838 1.4876 0 6031300 2139700 3891600 16901 1680 6378 6527 26450;26451 26451 IIQAAINSDGGQPEIK 16 1 0 Unmodified _IIQAAINSDGGQPEIK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.9465 2 827.443951 1652.87335 67125.61 0.69114 0.00057188 -0.16637 -0.00013766 0.52477 0.00043422 827.4439065712 831.952552436392 77.502 0.71002 77.502 77.195 77.905 0 229 46 7 0 0 0 0.00035739 1 40569 52.555 52.555 1 1.9805 1.6236 0 5049600 1829200 3220400 16902 1680 6378 6527 26452 26452 IIQEVEENPDLR 12 0 1 Unmodified _IIQEVEENPDLR_ 0 0 0 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8816 2 727.877913 1453.74127 71113.41 0.53985 0.00039295 -0.29391 -0.00021393 0.24595 0.00017902 727.877574822156 732.881948690282 61.983 0.62704 61.983 61.641 62.268 3.8147E-06 268 50 7 0 0 0 7.1376E-13 2 35433 133.23 98.84 1 1.0037 1.046 0 38401000 18622000 19779000 16903 1450 6379 6528 26453;26454 26453 IIQEVEENPDLR 12 0 1 Unmodified _IIQEVEENPDLR_ 0 0 0 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.8821 2 727.877913 1453.74127 73049.27 0.4491 0.00032689 -0.17526 -0.00012756 0.27384 0.00019932 727.87735423113 732.881977038547 60.944 0.85302 60.944 60.5 61.353 -3.8147E-06 274 78 5 0 0 0 1.0479E-05 1 35642 107.83 79.104 1 0.92958 1.017 0 34114000 15674000 18440000 16904 1450 6379 6528 26455 26455 IIQEVEENPDLR 12 0 1 Unmodified _IIQEVEENPDLR_ 0 0 0 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.8821 2 727.877913 1453.74127 70687.45 0.46309 0.00033707 0.075252 5.4775E-05 0.53834 0.00039185 727.878115914795 732.881934580342 71.608 0.77908 71.608 71.319 72.098 0 232 59 6 0 0 0 1.0479E-05 3 37664 107.83 72.597 1 1.7323 1.4511 0 10171000 3770100 6401300 16905 1450 6379 6528 26456;26457;26458 26456 IIQEVEENPDLR 12 0 1 Unmodified _IIQEVEENPDLR_ 0 0 0 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.8793 2 727.877913 1453.74127 73065.15 0.30339 0.00022083 0.16624 0.000121 0.46963 0.00034183 728.379898725517 732.882141976754 72.201 0.84312 72.201 71.865 72.708 0 286 70 6 0 0 0 3.5524E-05 3 37270 99.568 73.054 1 1.7472 1.4531 0 6079300 2551600 3527700 16906 1450 6379 6528 26459;26460;26461 26461 IIQEVEENPDLRK 13 1 1 Unmodified _IIQEVEENPDLRK_ 0 0 1 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.2944 3 528.286022 1581.83624 82890.36 0.73668 0.00038918 0.30076 0.00015889 1.0374 0.00054806 528.286140632792 534.293537547482 44.675 0.77644 44.675 44.149 44.926 0 255 69 6 0 0 0 0.0016958 2 23924 45.825 45.825 1 1.1387 1.3587 0 50913000 25788000 25125000 16907 1450 6380 6529 26462;26463 26462 IIQEVEENPDLRK 13 1 1 Unmodified _IIQEVEENPDLRK_ 0 0 1 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.2934 3 528.286022 1581.83624 81422.75 0.54741 0.00028919 -0.25345 -0.0001339 0.29396 0.0001553 528.286236579031 534.293345059898 43.503 0.58778 43.503 43.214 43.802 0 249 47 8 0 0 0 0.0016587 1 23509 45.992 38.702 1 1.1093 1.3038 0 65609000 29594000 36014000 16908 1450 6380 6529 26464 26464 IIQEVEENPDLRK 13 1 1 Unmodified _IIQEVEENPDLRK_ 0 0 1 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.4269 2 791.925394 1581.83624 NaN NaN NaN -0.040516 -3.2086E-05 NaN NaN NaN NaN 43.474 0.20382 43.474 43.35 43.553 0 0 0 0 0.012568 1 23632 51.927 18.06 1 NaN NaN 0 7077200 7077200 0 16909 1450 6380 6529 26465 26465 IIQEVEENPDLRK 13 1 1 Unmodified _IIQEVEENPDLRK_ 0 0 1 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.936 2 791.925394 1581.83624 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.446 1 43.446 42.946 43.946 0 0 0 0 0.013656 1 23583 61.344 35.226 1 16910 1450 6380 6529 26466 26466 IIQEVEENPDLRK 13 1 1 Unmodified _IIQEVEENPDLRK_ 0 0 1 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.2938 3 528.286022 1581.83624 84906.25 0.11705 6.1836E-05 0.8281 0.00043748 0.94515 0.00049931 528.286025511401 534.293878381592 51.875 0.78572 51.875 51.618 52.404 3.8147E-06 277 65 7 0 0 0 0.00082854 2 25566 50.222 50.222 1 1.783 1.4694 0 5254000 2140700 3113300 16911 1450 6380 6529 26467;26468 26467 IIQEVEENPDLRK 13 1 1 Unmodified _IIQEVEENPDLRK_ 0 0 1 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 534.2936 3 528.286022 1581.83624 82414.26 0.24535 0.00012961 0.25409 0.00013423 0.49944 0.00026385 528.620358973651 534.293799322998 52.29 0.74263 52.29 51.998 52.741 0 276 59 7 0 0 0 0.01502 2 25249 27.357 27.357 1 1.7882 1.5008 0 4990400 1766400 3224000 16912 1450 6380 6529 26469;26470 26469 IIQLAVINFLAK 12 1 0 Unmodified _IIQLAVINFLAK_ 0 0 0 Q8IZT6;B3KM85;Q5VYL4 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.9264 2 671.92648 1341.83841 NaN NaN NaN -0.16941 -0.00011383 NaN NaN NaN NaN 130.13 0.39072 130.13 129.93 130.32 0 0 0 0 0.0007376 1 84861 85.731 39.734 1 NaN NaN 0 2349100 2349100 0 16913 1902 6381 6530 26471 26471 IIQLAVINFLAK 12 1 0 Unmodified _IIQLAVINFLAK_ 0 0 0 Q8IZT6;B3KM85;Q5VYL4 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.935 2 671.92648 1341.83841 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.14 1 130.14 129.64 130.64 0 0 0 0 4.2214E-08 1 84846 107.57 78.488 1 16914 1902 6381 6530 26472 26472 IIQLAVINFLAK 12 1 0 Unmodified _IIQLAVINFLAK_ 0 0 0 Q8IZT6;B3KM85;Q5VYL4 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.9343 2 671.92648 1341.83841 76051.73 0.72236 0.00048538 0.018532 1.2452E-05 0.7409 0.00049783 671.926543506888 675.933209866892 129.61 0.48029 129.61 129.42 129.9 0 83 30 4 0 0 0 2.083E-13 2 86588 136.57 112.54 1 0.96042 0.95663 0 6353000 2961900 3391100 16915 1902 6381 6530 26473;26474 26473 IIQLLDDYPK 10 1 0 Unmodified _IIQLLDDYPK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VRK7;F8VS58 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.3497 2 609.342446 1216.67034 77529.98 0.56251 0.00034276 -0.28171 -0.00017166 0.28079 0.0001711 609.342362057303 613.349162751026 96.958 1.4345 96.958 96.491 97.925 0 635 123 8 0 0 0 2.4826E-06 2 59392 110.87 110.87 1 0.97239 1.1178 0 203440000 101050000 102390000 16916 345 6382 6531 26475;26476 26476 IIQLLDDYPK 10 1 0 Unmodified _IIQLLDDYPK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VRK7;F8VS58 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.349 2 609.342446 1216.67034 77922.85 0.54834 0.00033412 -0.40436 -0.00024639 0.14397 8.7729E-05 609.342279140106 613.349067432016 96.094 1.8005 96.094 95.623 97.424 0 793 150 8 0 0 0 4.6591E-08 2 60232 116.52 116.52 1 0.98544 1.1593 0 374410000 176560000 197850000 16917 345 6382 6531 26477;26478 26478 IIQLLDDYPK 10 1 0 Unmodified _IIQLLDDYPK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VRK7;F8VS58 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.3496 2 609.342446 1216.67034 77296.23 0.57389 0.0003497 0.013286 8.0958E-06 0.58718 0.00035779 609.342433080017 613.349405441456 109.95 1.4032 109.95 109.55 110.95 0 366 68 9 0 0 0 5.006E-06 1 63269 108.98 96.93 1 0.88297 0.72751 0 40891000 20901000 19990000 16918 345 6382 6531 26479 26479 IIQLLDDYPK 10 1 0 Unmodified _IIQLLDDYPK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VRK7;F8VS58 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.3494 2 609.342446 1216.67034 78286.26 0.66093 0.00040274 -0.03485 -2.1235E-05 0.62608 0.0003815 609.342441494852 613.349355812677 109.83 1.981 109.83 109.38 111.36 0 465 101 8 0 0 0 0.00092994 2 62233 78.934 78.934 1 0.91853 0.75829 0 31013000 16595000 14418000 16919 345 6382 6531 26480;26481 26480 IIQQGLIR 8 0 1 Unmodified _IIQQGLIR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.8053 2 470.800552 939.58655 89727.78 0.1011 4.7598E-05 -0.0067153 -3.1616E-06 0.094384 4.4436E-05 470.800499661508 475.804577185684 59.872 0.73268 59.872 59.616 60.349 3.8147E-06 161 48 5 0 0 0 0.029371 1 30487 52.636 11.409 1 2.098 1.7846 0 2853100 940400 1912700 16920 229 6383 6532 26482 26482 IIQQGLIR 8 0 1 Unmodified _IIQQGLIR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.8049 2 470.800552 939.58655 90867.42 0.22697 0.00010686 -0.26884 -0.00012657 -0.041868 -1.9712E-05 470.800427044139 475.804513340544 60.279 0.65192 60.279 59.985 60.637 0 134 49 4 0 0 0 0.033362 1 30049 50.025 11.218 1 2.154 1.8428 0 2866600 891730 1974900 16921 229 6383 6532 26483 26483 IIQQVLQGLDYLHTK 15 1 0 Unmodified _IIQQVLQGLDYLHTK_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.0085 3 590.336716 1767.98832 79321.4 1.1888 0.00070179 0.067669 3.9948E-05 1.2565 0.00074174 590.336676220873 593.342539218002 110.44 0.68513 110.44 110.14 110.82 -7.6294E-06 205 48 8 0 0 0 6.7591E-05 1 69230 63.128 63.128 1 1.9474 2.1186 0 48313000 16702000 31612000 16922 1988 6384 6533 26484 26484 IIQQVLQGLDYLHTK 15 1 0 Unmodified _IIQQVLQGLDYLHTK_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.0088 3 590.336716 1767.98832 NaN NaN NaN -0.16045 -9.4722E-05 NaN NaN NaN NaN 109.65 0.55073 109.65 109.37 109.93 0 0 0 0 0.0057858 1 70254 42.958 30.08 1 NaN NaN 0 14105000 0 14105000 16923 1988 6384 6533 26485 26485 IIQSWEK 7 1 0 Unmodified _IIQSWEK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 456.2575 2 452.25036 902.486168 91686.14 0.15038 6.8008E-05 0.2447 0.00011067 0.39508 0.00017867 452.250524855659 456.257415556008 43.034 0.83278 43.034 42.589 43.422 0 165 52 6 0 0 0 0.045193 1 20254 57.281 41.842 1 1.8147 1.4869 0 2486300 931670 1554700 16924 1565 6385 6534 26486 26486 IIQSWEK 7 1 0 Unmodified _IIQSWEK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 456.2574 2 452.25036 902.486168 90435.09 -0.22574 -0.00010209 0.4597 0.0002079 0.23397 0.00010581 452.250613230498 456.257514542404 43.126 0.73247 43.126 42.772 43.505 0 162 46 5 0 0 0 0.045193 1 19699 57.281 49.341 1 1.6174 1.3123 0 2823400 993830 1829600 16925 1565 6385 6534 26487 26487 IIQTPGLWESENQNK 15 1 0 Unmodified _IIQTPGLWESENQNK_ 0 0 0 Q9NP72;Q5W0J0;A0A087X163;B7Z5V3;Q59EW3 Q9NP72 Q9NP72 RAB18 Ras-related protein Rab-18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.9568 2 878.946858 1755.87916 NaN NaN NaN 0.40204 0.00035337 NaN NaN NaN NaN 80.131 0.32892 80.131 79.906 80.235 0 0 0 0 0.00050047 2 48843 71.555 60.945 1 NaN NaN 0 6100000 0 6100000 16926 2055 6386 6535 26488;26489 26489 IIRPSETAGR 10 0 2 Unmodified _IIRPSETAGR_ 0 0 1 A0A087WVZ9;E5KT65;P19388;B4DJ89;A0A087WWX0 A0A087WVZ9 A0A087WVZ9 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 367.2118 3 367.212128 1098.61456 98558.38 -0.20082 -7.3745E-05 -0.037883 -1.3911E-05 -0.23871 -8.7656E-05 367.211997688318 373.884137924556 19.846 0.3256 19.846 19.671 19.997 -1.9073E-06 39 13 5 0 0 0 0.0017339 1 6195 60.641 23.092 1 0.80939 0.88059 0 18088000 9685300 8403000 16927 423 6387 6536 26490 26490 IISAASEGGANVFTVSYFK 19 1 0 Unmodified _IISAASEGGANVFTVSYFK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.007 2 981.004373 1959.99419 61530.31 0.81339 0.00079793 0.49892 0.00048944 1.3123 0.0012874 981.004603499993 985.012286449459 111.51 0.52058 111.51 111.26 111.78 -7.6294E-06 145 37 6 0 0 0 8.315E-06 2 70217 75.669 75.669 1 1.5647 1.5364 0 23088000 7539100 15548000 16928 610 6388 6537 26491;26492 26492 IISAASEGGANVFTVSYFK 19 1 0 Unmodified _IISAASEGGANVFTVSYFK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 985.0122 2 981.004373 1959.99419 61810.71 0.26137 0.00025641 1.0835 0.0010629 1.3448 0.0013193 981.506208177515 985.012575222414 110.94 0.70648 110.94 110.66 111.37 7.6294E-06 164 52 6 0 0 0 6.1442E-06 2 71554 78.763 78.763 1 1.4728 1.4744 0 15613000 6137700 9474900 16929 610 6388 6537 26493;26494 26493 IISAASEGGANVFTVSYFK 19 1 0 Unmodified _IISAASEGGANVFTVSYFK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 985.0113 2 981.004373 1959.99419 61424.41 0.47739 0.00046832 0.075591 7.4155E-05 0.55298 0.00054247 981.506193896365 985.51373344004 122.67 0.58133 122.67 122.4 122.99 0 122 28 8 0 0 0 0.0022917 2 73193 35.037 35.037 1 1.1608 0.93154 0 8107100 4268200 3838900 16930 610 6388 6537 26495;26496 26496 IISAASEGGANVFTVSYFK 19 1 0 Unmodified _IISAASEGGANVFTVSYFK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 981.0059 2 981.004373 1959.99419 61229.85 0.4996 0.00049011 0.77586 0.00076112 1.2755 0.0012512 981.004925758777 985.012227579316 122.5 0.53998 122.5 122.22 122.76 7.6294E-06 101 23 7 0 0 0 0.00037693 1 72124 42.568 42.568 1 1.2745 1.0412 0 8131200 3378200 4752900 16931 610 6388 6537 26497 26497 IISAISELLER 11 0 1 Unmodified _IISAISELLER_ 0 0 0 Q9NU22;Q6PJJ1;Q6AI22 Q9NU22 Q9NU22 MDN1;DKFZp686H16106 Midasin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3708 2 622.366453 1242.71835 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.93 1 114.93 114.43 115.43 0 0 0 0 0.011078 1 74885 57.859 23.472 1 16932 2071 6389 6538 26498 26498 IISDNLTYCK 10 1 0 Unmodified _IISDNLTYCK_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.808 2 613.807913 1225.60127 75020.16 0.64353 0.000395 0.080047 4.9134E-05 0.72358 0.00044414 613.807956523402 617.815064763609 54.288 0.67661 54.288 53.985 54.661 0 308 57 8 0 0 0 0.00030515 2 30357 90.629 79.919 1 0.74708 0.87052 0 264070000 155970000 108100000 16933 2129 6390 6539 26499;26500 26499 IISDNLTYCK 10 1 0 Unmodified _IISDNLTYCK_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8159 2 613.807913 1225.60127 76113.93 -0.030207 -1.8541E-05 0.15012 9.2144E-05 0.11991 7.3602E-05 613.808043044627 617.815107890021 53.284 0.82992 53.284 52.898 53.728 0 420 77 7 0 0 0 1.6639E-05 2 30344 100.25 88.199 1 0.70329 0.79437 0 129420000 78524000 50894000 16934 2129 6390 6539 26501;26502 26502 IISDNLTYCK 10 1 0 Unmodified _IISDNLTYCK_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.8085 2 613.807913 1225.60127 75309.96 0.17301 0.00010619 0.20562 0.00012621 0.37862 0.0002324 613.807997614429 617.815041910854 63.177 1.3217 63.177 62.75 64.072 3.8147E-06 520 116 9 0 0 0 0.0011505 1 32359 75.378 70.766 1 0.98208 0.80862 0 40259000 21220000 19039000 16935 2129 6390 6539 26503 26503 IISDNLTYCK 10 1 0 Unmodified _IISDNLTYCK_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.8081 2 613.807913 1225.60127 74625.63 0.2263 0.00013891 0.19076 0.00011709 0.41706 0.000256 613.807971485169 617.815012373515 63.757 1.1955 63.757 63.351 64.546 0 568 104 9 0 0 0 0.009516 2 31970 54.608 49.995 1 0.96664 0.80622 0 41582000 21034000 20548000 16936 2129 6390 6539 26504;26505 26504 IISLETYNLLR 11 0 1 Unmodified _IISLETYNLLR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.8917 2 667.887552 1333.76055 75680.34 0.81286 0.0005429 -0.17263 -0.0001153 0.64023 0.0004276 667.887345137561 672.891581551525 112.36 0.98216 112.36 112.03 113.01 0 342 70 8 0 0 0 7.9225E-05 2 70734 98.033 78.664 1 1.659 1.7696 0 44095000 16698000 27398000 16937 1754 6391 6540 26506;26507 26506 IISLETYNLLR 11 0 1 Unmodified _IISLETYNLLR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8878 2 667.887552 1333.76055 75736 0.89803 0.00059978 -0.13944 -9.3133E-05 0.75858 0.00050665 667.887361477978 672.891586141979 111.77 0.78462 111.77 111.43 112.22 0 293 55 8 0 0 0 1.3943E-10 2 72157 135.79 124.57 1 1.7239 1.9703 0 50437000 19596000 30840000 16938 1754 6391 6540 26508;26509 26509 IISLETYNLLR 11 0 1 Unmodified _IISLETYNLLR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.8922 2 667.887552 1333.76055 76958.02 0.82352 0.00055002 -0.17856 -0.00011926 0.64495 0.00043076 667.887239126637 672.891590969632 123.58 0.71742 123.58 123.38 124.1 0 145 29 8 0 0 0 0.00036785 2 73866 83.998 70.407 1 2.2565 1.8638 0 11459000 3853200 7605400 16939 1754 6391 6540 26510;26511 26510 IISLETYNLLR 11 0 1 Unmodified _IISLETYNLLR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.8876 2 667.887552 1333.76055 76587.98 0.79106 0.00052834 -0.15599 -0.00010418 0.63507 0.00042416 667.887319784828 672.891584201289 123.46 0.85975 123.46 123.19 124.05 -7.6294E-06 118 34 8 0 0 0 0.0006898 2 72862 73.233 52.93 1 2.5905 2.1213 0 8981500 2568000 6413500 16940 1754 6391 6540 26512;26513 26513 IISNASCTTNCLAPLAK 17 1 0 Unmodified _IISNASCTTNCLAPLAK_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.4653 2 917.463503 1832.91245 62860.79 0.57113 0.00052399 0.27238 0.0002499 0.84351 0.00077389 917.464104637255 921.471109136829 76.338 0.71349 76.338 75.999 76.713 0 269 57 7 0 0 0 7.1332E-13 2 44851 120.87 120.87 1 2.3891 2.7047 0 100590000 27727000 72862000 16941 1442 6392 6541 26514;26515 26515 IISNASCTTNCLAPLAK 17 1 0 Unmodified _IISNASCTTNCLAPLAK_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.4681 2 917.463503 1832.91245 NaN NaN NaN -0.25319 -0.00023229 NaN NaN NaN NaN 75.31 0.6727 75.31 74.983 75.656 0 0 0 0 0.0010138 1 45199 61.375 49.21 1 NaN NaN 0 79231000 0 79231000 16942 1442 6392 6541 26516 26516 IISNASCTTNCLAPLAK 17 1 0 Unmodified _IISNASCTTNCLAPLAK_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 921.9734 2 917.463503 1832.91245 NaN NaN NaN -0.14204 -0.00013031 NaN NaN NaN NaN 87.409 1.0811 87.409 87.092 88.173 7.6294E-06 0 0 0 0.0033242 1 47932 53.034 37.768 1 NaN NaN 0 18427000 0 18427000 16943 1442 6392 6541 26517 26517 IISNVPADSLIR 12 0 1 Unmodified _IISNVPADSLIR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.3823 2 649.377352 1296.74015 NaN NaN NaN 0.070974 4.6089E-05 NaN NaN NaN NaN 85.672 0.81311 85.672 85.277 86.09 0 0 0 0 0.0016061 1 51405 76.143 34.695 1 NaN NaN 0 85767000 0 85767000 16944 2103 6393 6542 26518 26518 IISNVPADSLIR 12 0 1 Unmodified _IISNVPADSLIR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.3817 2 649.377352 1296.74015 76576.61 0.68549 0.00044514 0.076356 4.9584E-05 0.76185 0.00049473 649.378807814448 654.381492359482 84.729 0.83736 84.729 84.331 85.168 0 266 71 7 0 0 0 1.0535E-12 1 52012 130.98 93.255 1 49.117 56.819 0 268950000 8776100 260170000 16945 2103 6393 6542 26519 26519 IISNVPADSLIR 12 0 1 Unmodified _IISNVPADSLIR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 654.3821 2 649.377352 1296.74015 74820.09 0.76293 0.00049543 -0.067275 -4.3687E-05 0.69566 0.00045174 649.378589961986 654.381414415639 98.063 1.3631 98.063 97.698 99.061 -7.6294E-06 283 88 7 0 0 0 3.1772E-05 1 55253 99.788 69.978 1 61.272 51.928 0 32062000 567750 31494000 16946 2103 6393 6542 26520 26520 IISNVPADSLIR 12 0 1 Unmodified _IISNVPADSLIR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.699 2 649.377352 1296.74015 74530 0.62721 0.00040729 0.21248 0.00013798 0.83969 0.00054528 649.37840191199 654.381591590529 97.913 1.2773 97.913 97.523 98.8 0 275 78 7 0 0 0 0.017079 1 54179 59.542 29.732 1 57.143 49.846 0 28776000 575450 28200000 16947 2103 6393 6542 26521 26521 IISSDRDLLAVVFYGTEK 18 1 1 Unmodified _IISSDRDLLAVVFYGTEK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.0416 3 676.033362 2025.07826 73684.95 0.96143 0.00064996 -0.086525 -5.8494E-05 0.8749 0.00059146 676.367658534081 682.040835667846 119.34 1.2941 119.34 118.93 120.22 0 462 86 8 0 0 0 1.2856E-05 2 76825 67.727 67.727 1 0.39952 0.4784 0 56894000 39753000 17141000 16948 82 6394 6543 26522;26523 26523 IISSDRDLLAVVFYGTEK 18 1 1 Unmodified _IISSDRDLLAVVFYGTEK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.3753 3 676.033362 2025.07826 74317.39 0.60017 0.00040573 0.032004 2.1635E-05 0.63217 0.00042737 676.367717515846 682.040874633567 118.67 1.2443 118.67 118.2 119.44 0 477 80 11 0 0 0 1.2255E-05 3 78280 68.567 68.567 1 0.40217 0.47453 0 121410000 86671000 34737000 16949 82 6394 6543 26524;26525;26526 26526 IISSDRDLLAVVFYGTEK 18 1 1 Unmodified _IISSDRDLLAVVFYGTEK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.0413 3 676.033362 2025.07826 73541.95 0.6366 0.00043036 0.13283 8.9798E-05 0.76943 0.00052016 676.367689897902 682.040972696944 130.76 1.3235 130.76 130.49 131.81 0 328 61 11 0 0 0 2.0077E-05 2 79202 60.034 60.034 1 0.28723 0.25228 0 31726000 24044000 7682100 16950 82 6394 6543 26527;26528 26528 IISSDRDLLAVVFYGTEK 18 1 1 Unmodified _IISSDRDLLAVVFYGTEK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 676.0338 3 676.033362 2025.07826 73314.13 0.97744 0.00066078 -0.17076 -0.00011544 0.80668 0.00054534 676.367492091921 682.040738808782 130.51 1.2812 130.51 130.22 131.5 0 239 56 10 0 0 0 1.1417E-05 2 78069 69.737 69.737 1 0.29447 0.25038 0 31274000 24445000 6829100 16951 82 6394 6543 26529;26530 26529 IISSIEQK 8 1 0 Unmodified _IISSIEQK_ 0 0 0 V9HW98;P62258;G9K389;G9K388;B4DJB0;B4DJF2;I3L3T1;K7EIT4 V9HW98 V9HW98 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.2757 2 459.26875 916.522947 NaN NaN NaN -0.3609 -0.00016575 NaN NaN NaN NaN 30.645 0.47765 30.645 30.452 30.93 -1.9073E-06 0 0 0 0.020126 1 14988 65.313 28.743 1 NaN NaN 0 9980800 0 9980800 16952 1637 6395 6544 26531 26531 IISSIEQK 8 1 0 Unmodified _IISSIEQK_ 0 0 0 V9HW98;P62258;G9K389;G9K388;B4DJB0;B4DJF2;I3L3T1;K7EIT4 V9HW98 V9HW98 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2757 2 459.26875 916.522947 89340.95 0.042695 1.9609E-05 0.0097409 4.4737E-06 0.052436 2.4082E-05 459.268699307661 463.275558561264 30.081 0.46734 30.081 29.93 30.397 -1.9073E-06 123 38 4 0 0 0 0.030859 1 14661 51.662 22.513 1 1.5069 1.5256 0 13020000 5852500 7167400 16953 1637 6395 6544 26532 26532 IISSLSSAFHVFEDGNK 17 1 0 Unmodified _IISSLSSAFHVFEDGNK_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.6486 3 617.647619 1849.92103 78131.69 0.63918 0.00039479 0.034023 2.1014E-05 0.6732 0.0004158 617.647930473934 620.318875961645 118.57 0.44057 118.57 118.36 118.8 0 78 21 7 0 0 0 0.054184 1 70066 9.6577 9.6577 1 1.2057 0.95631 0 4480500 1818500 2662000 16954 641 6396 6545 26533 26533 IISVFVDALPHVPEHR 16 0 1 Unmodified _IISVFVDALPHVPEHR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.675 3 610.340461 1827.99955 79429.77 0.86362 0.0005271 -0.18417 -0.00011241 0.67945 0.00041469 610.674174894223 613.676240786271 114.08 0.73007 114.08 113.84 114.57 0 148 31 8 0 0 0 0.050258 1 66636 15.392 15.392 1 1.2701 1.0769 0 5093800 2136000 2957800 16955 897 6397 6546 26534 26534 IITDVIGNPEEERR 14 0 2 Unmodified _IITDVIGNPEEERR_ 0 0 1 J3KMX2;B9EGA3;Q92925;J3QWB6 J3KMX2 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.9597 3 547.624926 1639.85295 NaN NaN NaN 0.31336 0.0001716 NaN NaN NaN NaN 62.937 0.60552 62.937 62.684 63.29 0 0 0 0 0.00097213 1 36994 49.31 45.585 1 NaN NaN 0 9313300 9313300 0 16956 1120 6398 6547 26535 26535 IITDVIGNPEEERR 14 0 2 Unmodified _IITDVIGNPEEERR_ 0 0 1 J3KMX2;B9EGA3;Q92925;J3QWB6 J3KMX2 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.2892 3 547.624926 1639.85295 84051.41 0.48807 0.00026728 -0.29937 -0.00016394 0.1887 0.00010334 547.959196134371 554.296592164377 73.488 0.36031 73.488 73.313 73.674 0 89 28 4 0 0 0 0.013505 1 38863 19.323 19.323 1 1.3369 1.2225 0 1862300 708410 1153900 16957 1120 6398 6547 26536 26536 IITDVIGNPEEERR 14 0 2 Unmodified _IITDVIGNPEEERR_ 0 0 1 J3KMX2;B9EGA3;Q92925;J3QWB6 J3KMX2 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.9596 3 547.624926 1639.85295 86591.31 0.49893 0.00027323 -0.050624 -2.7723E-05 0.44831 0.0002455 547.624820690831 554.296884504217 73.859 0.4142 73.859 73.69 74.104 0 82 30 4 0 0 0 0.038447 1 38361 18.102 18.102 1 0.90595 0.80829 0 1477600 723670 753970 16958 1120 6398 6547 26537 26537 IITHPNFNGNTLDNDIMLIK 20 1 0 Oxidation (M) _IITHPNFNGNTLDNDIM(ox)LIK_ IITHPNFNGNTLDNDIM(1)LIK IITHPNFNGNTLDNDIM(86.73)LIK 0 1 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.3991 3 767.063215 2298.16782 NaN NaN NaN 0.13994 0.00010734 NaN NaN NaN NaN 102.21 0.60503 102.21 102 102.6 0 0 0 0 3.4529E-10 1 64430 86.727 74.566 1 NaN NaN 0 22455000 22455000 0 + 16959 1148 6399 6548 26538 26538 854 IITHPNFNGNTLDNDIMLIK 20 1 0 Oxidation (M) _IITHPNFNGNTLDNDIM(ox)LIK_ IITHPNFNGNTLDNDIM(1)LIK IITHPNFNGNTLDNDIM(57.05)LIK 0 1 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.0638 3 767.063215 2298.16782 NaN NaN NaN -0.92513 -0.00070964 NaN NaN NaN NaN 119.22 0.78854 119.22 118.68 119.47 7.6294E-06 0 0 0 9.1141E-05 1 70519 57.045 47.465 1 NaN NaN 0 8624100 8624100 0 + 16960 1148 6399 6548 26539 26539 854 IITHPNFNGNTLDNDIMLIK 20 1 0 Oxidation (M) _IITHPNFNGNTLDNDIM(ox)LIK_ IITHPNFNGNTLDNDIM(1)LIK IITHPNFNGNTLDNDIM(50.1)LIK 0 1 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 767.064 3 767.063215 2298.16782 NaN NaN NaN -0.1532 -0.00011752 NaN NaN NaN NaN 114.55 0.45275 114.55 114.38 114.83 0 0 0 0 0.00080527 1 65969 50.098 40.518 1 NaN NaN 0 8480200 8480200 0 + 16961 1148 6399 6548 26540 26540 854 IITHPNFNGNTLDNDIMLIK 20 1 0 Oxidation (M) _IITHPNFNGNTLDNDIM(ox)LIK_ IITHPNFNGNTLDNDIM(1)LIK IITHPNFNGNTLDNDIM(41.14)LIK 0 1 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 767.064 3 767.063215 2298.16782 NaN NaN NaN -1.2807 -0.00098235 NaN NaN NaN NaN 119.01 0.48586 119.01 118.71 119.2 0 0 0 0 0.0055166 1 69470 41.136 32.427 1 NaN NaN 0 8545200 8545200 0 + 16962 1148 6399 6548 26541 26541 854 IITHPNFNGNTLDNDIMLIK 20 1 0 Unmodified _IITHPNFNGNTLDNDIMLIK_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.0652 3 761.731577 2282.1729 NaN NaN NaN -0.222 -0.0001691 NaN NaN NaN NaN 119.01 0.73917 119.01 118.54 119.28 7.6294E-06 0 0 0 2.2322E-14 3 69389 76.704 71.313 1 NaN NaN 0 25349000 25349000 0 + 16963 1148 6399 6549 26542;26543;26544 26543 IITLAGPTNAIFK 13 1 0 Unmodified _IITLAGPTNAIFK_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;Q15366;B4DLC0 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.9131 2 679.905745 1357.79694 74069.01 0.55552 0.0003777 0.24727 0.00016812 0.80279 0.00054582 679.906085150176 683.912986186155 109.52 0.87982 109.52 109.26 110.14 -7.6294E-06 365 64 9 0 0 0 0.00019019 1 68494 70.977 53.952 1 2.2158 2.6185 0 391250000 122440000 268810000 16964 1263;1760 6400 6550 26545 26545 IITLAGPTNAIFK 13 1 0 Unmodified _IITLAGPTNAIFK_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;Q15366;B4DLC0 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.906 2 679.905745 1357.79694 74029.09 0.77254 0.00052526 0.012458 8.4701E-06 0.785 0.00053373 679.905901623279 683.91282250678 108.87 0.83028 108.87 108.59 109.42 0 333 59 8 0 0 0 0.00010048 2 69747 92.538 75.513 1 2.2249 2.5852 0 230620000 71853000 158770000 16965 1263;1760 6400 6550 26546;26547 26547 IITLAGPTNAIFK 13 1 0 Unmodified _IITLAGPTNAIFK_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;Q15366;B4DLC0 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.4068 2 679.905745 1357.79694 73510.84 0.66698 0.00045348 -0.42619 -0.00028977 0.24079 0.00016371 679.905570524141 683.912613522773 120.7 0.85852 120.7 120.5 121.36 0 172 39 8 0 0 0 8.9801E-09 2 71672 116.13 90.193 1 1.868 1.5187 0 29324000 9931300 19392000 16966 1263;1760 6400 6550 26548;26549 26548 IITLAGPTNAIFK 13 1 0 Unmodified _IITLAGPTNAIFK_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;Q15366;B4DLC0 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.9127 2 679.905745 1357.79694 74097.12 0.83062 0.00056474 -0.42738 -0.00029058 0.40324 0.00027416 679.9054692607 683.912574292779 120.52 0.91222 120.52 120.24 121.15 0 221 46 8 0 0 0 0.00011207 2 70564 74.944 57.919 1 1.7653 1.4453 0 26920000 8991400 17929000 16967 1263;1760 6400 6550 26550;26551 26551 IITLTGPTNAIFK 13 1 0 Unmodified _IITLTGPTNAIFK_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.4132 2 694.911027 1387.8075 73270.9 0.81833 0.00056866 -0.010033 -6.9721E-06 0.80829 0.00056169 694.910979775656 698.918063372885 109.22 0.71758 109.22 108.94 109.66 0 292 50 8 0 0 0 0.00012464 4 68214 74.162 25.879 1 1.9449 2.2003 0 102630000 34711000 67915000 16968 1759 6401 6551 26552;26553;26554;26555 26553 IITLTGPTNAIFK 13 1 0 Unmodified _IITLTGPTNAIFK_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.912 2 694.911027 1387.8075 73839.41 0.7009 0.00048706 -0.0081126 -5.6375E-06 0.69279 0.00048142 694.910991307053 698.918024358314 108.64 0.76472 108.64 108.29 109.06 0 284 53 9 0 0 0 4.3383E-05 2 69438 97.284 39.685 1 1.798 2.0146 0 111750000 41161000 70592000 16969 1759 6401 6551 26556;26557 26557 IITLTGPTNAIFK 13 1 0 Unmodified _IITLTGPTNAIFK_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.9117 2 694.911027 1387.8075 73363.64 0.42797 0.0002974 0.54214 0.00037674 0.97012 0.00067415 694.911455612648 698.918404213686 120.45 0.64304 120.45 120.25 120.89 7.6294E-06 143 30 8 0 0 0 0.0029277 1 71525 51.762 22.095 1 1.3498 1.0763 0 19892000 8421800 11470000 16970 1759 6401 6551 26558 26558 IITLTGPTNAIFK 13 1 0 Unmodified _IITLTGPTNAIFK_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.9119 2 694.911027 1387.8075 73983.34 0.77478 0.0005384 0.38175 0.00026528 1.1565 0.00080369 694.911345203368 698.918238038439 120.14 0.58838 120.14 119.96 120.55 7.6294E-06 154 30 9 0 0 0 0.00015376 1 70364 85.377 25.578 1 1.3742 1.1018 0 19191000 7903700 11287000 16971 1759 6401 6551 26559 26559 IITPLNK 7 1 0 Unmodified _IITPLNK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.7582 2 399.757821 797.501089 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.235 1 46.235 45.735 46.735 0 0 0 0 0.0455 1 24944 67.741 28.905 1 16972 39 6402 6552 26560 26560 IITPLNK 7 1 0 Unmodified _IITPLNK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 399.7578 2 399.757821 797.501089 98947.69 0.1008 4.0296E-05 0.60442 0.00024162 0.70522 0.00028192 399.758062429062 403.76510296379 45.223 0.67712 45.223 44.867 45.544 0 141 58 4 0 0 0 0.02673 1 24793 77.374 34.327 1 1.2496 1.3381 0 21225000 7235100 13990000 16973 39 6402 6552 26561 26561 IITYASSSDSTSLLAK 16 1 0 Unmodified _IITYASSSDSTSLLAK_ 0 0 0 Q9Y4A0 Q9Y4A0 Q9Y4A0 JRKL Jerky protein homolog-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 828.938 2 828.938167 1655.86178 68569.19 0.7115 0.00058979 -0.28211 -0.00023385 0.42939 0.00035594 828.937866393749 832.945480721566 93.093 0.35445 93.093 92.931 93.285 7.6294E-06 57 21 4 0 0 0 0.019615 1 51933 28.903 17.037 1 1.7968 1.5178 0 1964000 929980 1034000 16974 2144 6403 6553 26562 26562 IIVDELK 7 1 0 Unmodified _IIVDELK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;H0YAM7;D6REE5;D6RF23;H0Y9P0 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 419.2631 2 415.255111 828.49567 94797.7 0.26631 0.00011058 0.71502 0.00029692 0.98133 0.0004075 415.255113446783 419.262458616195 61.228 1.0995 61.228 60.739 61.839 3.8147E-06 421 105 7 0 0 0 0.02688 2 35635 74.415 18.229 1 1.7804 2.0461 0 172740000 71503000 101240000 16975 1227 6404 6554 26563;26564 26563 IIVDELK 7 1 0 Unmodified _IIVDELK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;H0YAM7;D6REE5;D6RF23;H0Y9P0 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 419.2622 2 415.255111 828.49567 93192.47 -0.45307 -0.00018814 0.60846 0.00025266 0.15539 6.4527E-05 415.25517406244 419.262388891242 71.35 0.6933 71.35 71.087 71.78 0 175 49 7 0 0 0 0.059659 1 37549 50.632 17.116 1 1.8742 1.4595 0 15637000 5529200 10108000 16976 1227 6404 6554 26565 26565 IIVDTYGGWGAHGGGAFSGK 20 1 0 Unmodified _IIVDTYGGWGAHGGGAFSGK_ 0 0 0 A0A140VJP5;P31153;B4DEX8;B4DN74;A8K455;Q00266 A0A140VJP5 A0A140VJP5 MAT2A;MAT1A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase;S-adenosylmethionine synthase isoform type-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.9888 3 650.654997 1948.94316 NaN NaN NaN -0.27412 -0.00017836 NaN NaN NaN NaN 81.076 0.51136 81.076 80.828 81.34 0 0 0 0 0.052391 1 49533 14.107 7.6698 1 NaN NaN 0 7721900 7721900 0 16977 606 6405 6555 26566 26566 IIVEGGGAVAALQAMK 16 1 0 Oxidation (M) _IIVEGGGAVAALQAM(ox)K_ IIVEGGGAVAALQAM(1)K IIVEGGGAVAALQAM(57.02)K 0 1 0 Q6NXE6;B4E1N1;Q68CW5;H0YGQ5 Q6NXE6 Q6NXE6 ARMC6;DKFZp762A1314 Armadillo repeat-containing protein 6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.4385 2 772.429258 1542.84396 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.531 1 82.531 82.031 83.031 0 0 0 0 0.00046303 1 49304 57.019 37.748 1 16978 1848 6406 6556 26567 26567 1697 IIVFADNVFALK 12 1 0 Unmodified _IIVFADNVFALK_ 0 0 0 G3V1S1;B3KTH1;B3KRG2;A8K359;P19447;Q53HW5 G3V1S1 G3V1S1 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.3955 2 675.395013 1348.77547 NaN NaN NaN 0.56027 0.00037841 NaN NaN NaN NaN 122.12 0.3277 122.12 121.93 122.26 0 0 0 0 0.0079412 1 78988 57.598 17.554 1 NaN NaN 0 1940900 1940900 0 16979 717 6407 6557 26568 26568 IIVLGLLPR 9 0 1 Unmodified _IIVLGLLPR_ 0 0 0 J3KNE3;V9HW44;P68402 J3KNE3 J3KNE3 PAFAH1B2;HEL-S-303 Platelet-activating factor acetylhydrolase IB subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.3489 2 497.344595 992.674637 NaN NaN NaN -0.35809 -0.00017809 NaN NaN NaN NaN 116.94 0.4686 116.94 116.68 117.15 0 0 0 0 0.0074259 1 74704 70.268 65.413 1 NaN NaN 0 2383900 0 2383900 16980 1325 6408 6558 26569 26569 IIVLGLLPR 9 0 1 Unmodified _IIVLGLLPR_ 0 0 0 J3KNE3;V9HW44;P68402 J3KNE3 J3KNE3 PAFAH1B2;HEL-S-303 Platelet-activating factor acetylhydrolase IB subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.349 2 497.344595 992.674637 NaN NaN NaN -0.19575 -9.7357E-05 NaN NaN NaN NaN 116.24 0.46952 116.24 116.01 116.48 7.6294E-06 0 0 0 0.0057956 1 76003 73.616 67.957 1 NaN NaN 0 2346500 0 2346500 16981 1325 6408 6558 26570 26570 IIWTEQANEK 10 1 0 Unmodified _IIWTEQANEK_ 0 0 0 Q59HG1 Q59HG1 Q59HG1 Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.3265 2 616.319502 1230.62445 77651.84 0.94826 0.00058443 2.0236 0.0012472 2.9718 0.0018316 616.319396943388 620.326483399212 49.97 0.66315 49.97 49.701 50.364 3.8147E-06 220 58 7 0 0 0 4.0192E-08 2 27452 117.81 83.558 1 0.62846 0.70026 0 61548000 36620000 24928000 16982 1803 6409 6559 26571;26572 26571 IIWTEQANEK 10 1 0 Unmodified _IIWTEQANEK_ 0 0 0 Q59HG1 Q59HG1 Q59HG1 Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.3185 2 616.319502 1230.62445 77009.27 0.58892 0.00036296 0.10534 6.4924E-05 0.69426 0.00042789 616.319418407114 620.326626684798 48.566 0.50696 48.566 48.391 48.898 0 163 38 6 0 0 0 0.001179 1 27153 74.92 53.223 1 0.70025 0.77574 0 46567000 28262000 18305000 16983 1803 6409 6559 26573 26573 IIWTEQANEK 10 1 0 Unmodified _IIWTEQANEK_ 0 0 0 Q59HG1 Q59HG1 Q59HG1 Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.3185 2 616.319502 1230.62445 76260.45 0.50403 0.00031064 -0.5163 -0.0003182 -0.012267 -7.5606E-06 616.31853878844 620.326408334914 57.713 0.73323 57.713 57.383 58.116 0 212 52 6 0 0 0 0.0091807 2 28598 55.064 26.665 1 1.5673 1.2938 0 11330000 4496200 6833700 16984 1803 6409 6559 26574;26575 26575 IIYIAPMR 8 0 1 Oxidation (M) _IIYIAPM(ox)R_ IIYIAPM(1)R IIYIAPM(46.37)R 0 1 0 O75643;A4FU77;Q9H8B9;Q5ZF01 O75643 O75643 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.7812 2 496.783513 991.552473 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.59 1 60.59 60.09 61.09 3.8147E-06 0 0 0 0.034833 1 34581 46.37 23.441 1 16985 1411 6410 6560 26576 26576 1092 IIYIAPMR 8 0 1 Oxidation (M) _IIYIAPM(ox)R_ IIYIAPM(1)R IIYIAPM(72.23)R 0 1 0 O75643;A4FU77;Q9H8B9;Q5ZF01 O75643 O75643 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.7882 2 496.783513 991.552473 85882.36 0.21707 0.00010784 -0.0034091 -1.6936E-06 0.21366 0.00010614 496.782922285647 501.787839865847 59.424 0.42997 59.424 59.295 59.725 -3.8147E-06 143 38 5 0 0 0 0.0050569 2 34574 72.234 45.631 1 1.5317 1.6768 0 30924000 11605000 19319000 16986 1411 6410 6560 26577;26578 26577 1092 IIYVPLPDAATR 12 0 1 Unmodified _IIYVPLPDAATR_ 0 0 0 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8832 2 664.88227 1327.74999 76137.66 0.55389 0.00036827 0.012362 8.2192E-06 0.56625 0.00037649 664.882526258269 669.886434888352 103.96 0.56593 103.96 103.69 104.26 0 158 49 4 0 0 0 0.021578 1 65812 38.567 38.567 1 0.77302 0.7694 0 8066700 4328700 3738000 16987 1919 6411 6561 26579 26579 IKEDLEEQEALEDGVACADEK 21 2 0 Unmodified _IKEDLEEQEALEDGVACADEK_ 0 0 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.3778 3 797.700448 2390.07952 70729.56 0.79576 0.00063478 0.25772 0.00020558 1.0535 0.00084036 798.035416796889 803.042909066274 73.032 0.30341 73.032 72.907 73.21 0 50 26 4 0 0 0 7.7735E-07 2 42803 49.515 42.563 1 1.3319 1.5728 0 15170000 7659700 7510200 16988 1412 6412 6562 26580;26581 26580 IKEDLEEQEALEDGVACADEK 21 2 0 Unmodified _IKEDLEEQEALEDGVACADEK_ 0 0 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.3743 3 797.700448 2390.07952 67256.02 0.94465 0.00075355 -0.3189 -0.00025439 0.62575 0.00049916 798.034629871884 803.377037006733 71.78 0.52213 71.78 71.513 72.035 0 115 43 4 0 0 0 1.3441E-08 4 42977 75.054 68.179 1 0.90475 1.0428 0 27926000 15553000 12373000 16989 1412 6412 6562 26582;26583;26584;26585 26582 IKEDLEEQEALEDGVACADEK 21 2 0 Unmodified _IKEDLEEQEALEDGVACADEK_ 0 0 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.3788 3 797.700448 2390.07952 67560.12 0.74698 0.00059586 1.0674 0.0008515 1.8144 0.0014474 797.703071278635 803.377975262738 84.059 0.38933 84.059 83.887 84.276 0 158 35 7 0 0 0 2.7236E-05 1 45037 42.813 42.813 1 0.71154 0.60174 0 6997600 3840900 3156700 16990 1412 6412 6562 26586 26586 IKNENTEGSPQEDGVELEGLK 21 2 0 Unmodified _IKNENTEGSPQEDGVELEGLK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.0427 3 762.708043 2285.1023 69543.32 0.36745 0.00028025 0.2442 0.00018626 0.61165 0.00046651 763.042584990304 768.385340112455 71.363 0.65599 71.363 71.071 71.727 0 357 46 11 0 0 0 0.0012138 3 37497 31.767 23.273 1 0.83508 0.71174 0 21581000 11494000 10087000 16991 1471 6413 6563 26587;26588;26589 26589 IKNENTEGSPQEDGVELEGLK 21 2 0 Unmodified _IKNENTEGSPQEDGVELEGLK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.0512 3 762.708043 2285.1023 69560.95 0.27941 0.00021311 0.31126 0.0002374 0.59067 0.00045051 763.042573931326 768.051013248205 71.854 0.54564 71.854 71.584 72.129 0 306 38 11 0 0 0 4.0285E-05 2 37017 39.507 39.507 1 0.84617 0.71749 0 19969000 11679000 8290400 16992 1471 6413 6563 26590;26591 26591 IKPAATSHVEGSGGVSAK 18 2 0 Unmodified _IKPAATSHVEGSGGVSAK_ 0 0 1 G3XAG1;Q96ME7;B4DES6;B7Z9P6 G3XAG1 G3XAG1 ZNF512 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.9718 3 565.972326 1694.89515 80114.07 0.030518 1.7273E-05 0.12106 6.8516E-05 0.15158 8.5788E-05 565.972413754613 571.315245770353 20.475 0.34549 20.475 20.313 20.659 0 87 16 8 0 0 0 2.1219E-05 2 5401 59.281 59.281 1 0.87293 0.74306 0 5427500 3200700 2226800 16993 1275 6414 6564 26592;26593 26593 IKPQFEGR 8 1 1 Unmodified _IKPQFEGR_ 0 0 1 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 331.5262 3 325.518781 973.534515 106586.2 0.044987 1.4644E-05 0.28211 9.1831E-05 0.32709 0.00010647 325.518838700986 331.526267651692 22.547 0.2858 22.547 22.436 22.722 -1.9073E-06 49 11 6 0 0 0 0.006759 1 8554 62.546 51.382 1 1.044 1.1727 0 13011000 6322900 6688500 16994 104 6415 6565 26594 26594 IKPSESNVTILGR 13 1 1 Unmodified _IKPSESNVTILGR_ 0 0 1 O75530;B4DVW7;E9PJK2;H0YEL4;E9PMU3 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.9402 3 471.940186 1412.79873 87139.71 0.022948 1.083E-05 -0.062426 -2.9461E-05 -0.039478 -1.8631E-05 471.940058937436 477.947686386357 52.367 0.5713 52.367 52.076 52.647 3.8147E-06 250 42 8 0 0 0 0.028413 2 29007 25.448 18.409 1 1.0452 1.258 0 96632000 44390000 52243000 16995 1407 6416 6566 26595;26596 26596 IKPSESNVTILGR 13 1 1 Unmodified _IKPSESNVTILGR_ 0 0 1 O75530;B4DVW7;E9PJK2;H0YEL4;E9PMU3 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.4061 2 707.40664 1412.79873 73902.72 0.52851 0.00037387 -0.51515 -0.00036442 0.013357 9.4487E-06 707.406051697376 716.417258117586 52.355 0.37944 52.355 52.165 52.545 -3.8147E-06 78 27 4 0 0 0 0.0015481 1 29082 66.267 48.831 1 0.9366 1.0664 0 24774000 11981000 12793000 16996 1407 6416 6566 26597 26597 IKPSESNVTILGR 13 1 1 Unmodified _IKPSESNVTILGR_ 0 0 1 O75530;B4DVW7;E9PJK2;H0YEL4;E9PMU3 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.9476 3 471.940186 1412.79873 87159.85 0.19547 9.225E-05 1.4088 0.00066489 1.6043 0.00075714 471.940092921328 477.947793048577 50.367 0.6401 50.367 49.874 50.514 0 260 57 10 0 0 0 0.013647 2 28371 33.685 20.548 1 1.0122 1.1955 0 141800000 74769000 67034000 16997 1407 6416 6566 26598;26599 26598 ILAAIIMK 8 1 0 Oxidation (M) _ILAAIIM(ox)K_ ILAAIIM(1)K ILAAIIM(60.29)K 0 1 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.7902 2 444.782982 887.55141 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.39 1 71.39 70.89 71.89 0 0 0 0 0.016247 1 41650 60.294 15.763 1 16998 5 6417 6567 26600 26600 4 ILAASWPQNREDEEK 15 1 1 Unmodified _ILAASWPQNREDEEK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.9645 3 595.963719 1784.86933 79705.34 0.82326 0.00049064 0.24186 0.00014414 1.0651 0.00063478 595.963863431368 602.304679483471 51.613 0.57145 51.613 51.299 51.871 0 148 51 5 0 0 0 0.010794 1 28527 28.089 25.179 1 0.58368 0.63951 0 17103000 9906600 7195900 16999 118 6418 6568 26601 26601 ILAASWPQNREDEEK 15 1 1 Unmodified _ILAASWPQNREDEEK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.9648 3 595.963719 1784.86933 NaN NaN NaN 0.15126 9.0147E-05 NaN NaN NaN NaN 50.032 0.29122 50.032 49.874 50.165 0 0 0 0 0.0019852 1 28191 44.691 28.292 1 NaN NaN 0 9235400 9235400 0 17000 118 6418 6568 26602 26602 ILAASWPQNREDEEK 15 1 1 Unmodified _ILAASWPQNREDEEK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.9717 3 595.963719 1784.86933 79025.63 0.38222 0.00022779 0.086652 5.1642E-05 0.46887 0.00027943 596.298004289079 601.971545746135 59.511 0.99537 59.511 58.981 59.976 0 356 74 7 0 0 0 0.001226 2 30307 33.301 27.894 1 0.96066 0.79515 0 3936700 1908900 2027800 17001 118 6418 6568 26603;26604 26603 ILAASWPQNREDEEK 15 1 1 Unmodified _ILAASWPQNREDEEK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.9633 3 595.963719 1784.86933 79830.3 0.51407 0.00030636 -0.21922 -0.00013065 0.29484 0.00017572 595.963484001753 601.971369187402 59.925 0.85256 59.925 59.446 60.299 -3.8147E-06 283 62 7 0 0 0 0.0018288 3 29978 48.704 44.8 1 1.0652 0.9103 0 2836800 1425300 1411500 17002 118 6418 6568 26605;26606;26607 26607 ILACHGTDSVLELFCILSK 19 1 0 Unmodified _ILACHGTDSVLELFCILSK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.043 3 726.042875 2175.1068 70654.61 0.13759 9.9895E-05 -0.38068 -0.00027639 -0.2431 -0.0001765 726.042774334435 728.714808207157 133.37 0.24556 133.37 133.26 133.5 0 24 6 8 0 0 0 1.2141E-08 1 87346 92.307 92.307 1 0.89373 0.96078 0 38907000 19750000 19157000 17003 1827 6419 6569 26608 26608 ILACHGTDSVLELFCILSK 19 1 0 Unmodified _ILACHGTDSVLELFCILSK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.0428 3 726.042875 2175.1068 71134.03 0.022101 1.6047E-05 -0.45034 -0.00032697 -0.42824 -0.00031092 726.042750366999 729.04869520288 133.33 0.21729 133.33 133.26 133.48 0 33 5 9 0 0 0 6.1916E-07 2 89562 84.653 84.653 1 0.84229 0.89914 0 36703000 19591000 17112000 17004 1827 6419 6569 26609;26610 26609 ILADPSDDTK 10 1 0 Unmodified _ILADPSDDTK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.7769 2 537.769311 1073.52407 90906.73 0.49553 0.00026648 1.9105 0.0010274 2.406 0.0012939 538.272837998395 541.776925699763 30.029 0.26589 30.029 29.9 30.166 1.9073E-06 76 23 5 0 0 0 0.0016591 1 14582 72.643 29.397 1 0.4927 0.48488 0 23955000 13106000 10849000 17005 397;1622 6420 6570 26611 26611 ILADPSDDTK 10 1 0 Unmodified _ILADPSDDTK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.7776 2 537.769311 1073.52407 84108.66 0.72967 0.00039239 1.8777 0.0010098 2.6074 0.0014022 538.272982125252 541.776759965663 29.567 0.31239 29.567 29.425 29.737 0 108 25 7 0 0 0 0.00082113 1 14254 80.688 35.607 1 0.44101 0.45705 0 18746000 9363100 9382400 17006 397;1622 6420 6570 26612 26612 ILAGALIK 8 1 0 Unmodified _ILAGALIK_ 0 0 0 REV__C9JEX3 REV__C9JEX3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.7763 2 399.776014 797.537475 97558.8 0.12049 4.8167E-05 0.42143 0.00016848 0.54191 0.00021664 399.776204059165 403.783311324665 87.08 0.12642 87.08 87.004 87.13 7.6294E-06 19 8 4 0 0 0 0.0043566 1 52569 93.885 4.1814 1 1.3858 1.4336 0 12721000 4800200 7921000 + 17007 2156 6421 6571 26613 26613 ILAGLGFDPEMQNRPTQK 18 1 1 Oxidation (M) _ILAGLGFDPEM(ox)QNRPTQK_ ILAGLGFDPEM(1)QNRPTQK ILAGLGFDPEM(49.56)QNRPTQK 0 1 1 Q8NE71;Q2L6I2;B4DNU2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.0171 3 677.682446 2030.02551 73361.84 0.66223 0.00044878 -0.26859 -0.00018202 0.39364 0.00026677 678.016630967311 683.690036047162 78.038 0.59586 78.038 77.773 78.369 7.6294E-06 278 47 8 0 0 0 1.9536E-05 3 46140 49.559 44.85 1 0.96038 1.1247 0 32337000 16638000 15699000 17008 1926 6422 6572 26614;26615;26616 26615 1757 ILAGLGFDPEMQNRPTQK 18 1 1 Oxidation (M) _ILAGLGFDPEM(ox)QNRPTQK_ ILAGLGFDPEM(1)QNRPTQK ILAGLGFDPEM(53.78)QNRPTQK 0 1 1 Q8NE71;Q2L6I2;B4DNU2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.017 3 677.682446 2030.02551 73283.68 0.41048 0.00027818 -0.029951 -2.0297E-05 0.38053 0.00025788 678.01674402147 683.689972778643 76.822 0.80707 76.822 76.556 77.363 0 294 62 8 0 0 0 1.6059E-05 1 46357 53.779 44.987 1 0.89742 1.0467 0 45612000 23924000 21688000 17009 1926 6422 6572 26617 26617 1757 ILAHNNFVGR 10 0 1 Unmodified _ILAHNNFVGR_ 0 0 0 O00425;Q9NZI8;D3DTW3 O00425;Q9NZI8 O00425 IGF2BP3;IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 384.2182 3 380.880602 1139.61998 97402.05 -0.03582 -1.3643E-05 1.1666 0.00044434 1.1308 0.0004307 380.880696936566 384.217547810076 34.316 0.36704 34.316 34.149 34.516 0 158 31 6 0 0 0 0.001009 1 17123 63.816 53.812 1 1.8434 1.9853 0 47733000 15633000 32101000 17010 1364;2087 6423 6573 26618 26618 ILAHNNFVGR 10 0 1 Unmodified _ILAHNNFVGR_ 0 0 0 O00425;Q9NZI8;D3DTW3 O00425;Q9NZI8 O00425 IGF2BP3;IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 384.2167 3 380.880602 1139.61998 96968.19 -0.11496 -4.3785E-05 0.064149 2.4433E-05 -0.05081 -1.9352E-05 380.880454941779 384.216704929728 32.967 0.45663 32.967 32.761 33.217 0 193 42 6 0 0 0 5.1446E-06 2 16400 83.948 67.81 1 2.1431 2.4153 0 46665000 15255000 31410000 17011 1364;2087 6423 6573 26619;26620 26619 ILAHNNFVGR 10 0 1 Unmodified _ILAHNNFVGR_ 0 0 0 O00425;Q9NZI8;D3DTW3 O00425;Q9NZI8 O00425 IGF2BP3;IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.8218 2 570.817264 1139.61998 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.001 1 33.001 32.501 33.501 0 0 0 0 0.0049314 1 16463 64.207 38.648 1 17012 1364;2087 6423 6573 26621 26621 ILAIGLINEALDEGDAQK 18 1 0 Unmodified _ILAIGLINEALDEGDAQK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;Q6P1N4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.5192 2 942.009655 1882.00476 62583.5 0.57044 0.00053736 0.51327 0.0004835 1.0837 0.0010209 942.009955898127 946.017255563182 124.93 0.45406 124.93 124.69 125.15 0 149 30 6 0 0 0 1.2167E-08 1 81174 121.28 121.28 1 1.5012 1.5607 0 16919000 7358200 9560700 17013 352 6424 6574 26622 26622 ILALLDALSTVHSQK 15 1 0 Unmodified _ILALLDALSTVHSQK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.982 3 536.982162 1607.92466 82033.8 0.75232 0.00040398 -0.36396 -0.00019544 0.38836 0.00020854 536.981952121424 539.653300303124 112.65 0.95599 112.65 112.28 113.23 0 344 68 8 0 0 0 6.9434E-05 3 71011 72.417 72.417 1 0.93624 1.0057 0 39627000 21207000 18420000 17014 1742 6425 6575 26623;26624;26625 26624 ILALLDALSTVHSQK 15 1 0 Unmodified _ILALLDALSTVHSQK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.9705 2 804.969605 1607.92466 70285.16 0.98495 0.00079285 -0.26791 -0.00021566 0.71704 0.00057719 804.969367078884 808.97635664903 112.63 0.64545 112.63 112.3 112.95 0 195 47 6 0 0 0 0.00013191 2 71070 85.288 85.288 1 0.96005 0.99978 0 14934000 7644800 7288900 17015 1742 6425 6575 26626;26627 26627 ILALLDALSTVHSQK 15 1 0 Unmodified _ILALLDALSTVHSQK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.982 3 536.982162 1607.92466 82899.38 0.91431 0.00049097 -0.52052 -0.00027951 0.39379 0.00021146 537.316234857844 539.653170799618 111.78 0.92781 111.78 111.47 112.4 7.6294E-06 351 67 8 0 0 0 0.00059858 3 72053 46.318 46.318 1 0.88688 0.91958 0 33358000 18460000 14898000 17016 1742 6425 6575 26628;26629;26630 26629 ILALLDALSTVHSQK 15 1 0 Unmodified _ILALLDALSTVHSQK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 805.4716 2 804.969605 1607.92466 69155.4 0.90302 0.0007269 -0.09954 -8.0127E-05 0.80348 0.00064678 804.969504025659 809.478025176129 111.77 0.66026 111.77 111.5 112.16 0 200 46 6 0 0 0 0.0008314 2 72118 64.439 64.439 1 1.0203 1.0236 0 15881000 6792400 9088700 17017 1742 6425 6575 26631;26632 26632 ILALLDALSTVHSQK 15 1 0 Unmodified _ILALLDALSTVHSQK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.988 3 536.982162 1607.92466 82311.26 0.81639 0.00043839 -0.22954 -0.00012326 0.58685 0.00031513 536.981983666273 539.653389630946 123.31 1.2193 123.31 123.04 124.26 -7.6294E-06 221 51 9 0 0 0 6.8645E-05 3 73603 62.377 62.377 1 1.4192 1.1269 0 19035000 7618500 11417000 17018 1742 6425 6575 26633;26634;26635 26634 ILALLDALSTVHSQK 15 1 0 Unmodified _ILALLDALSTVHSQK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 808.9777 2 804.969605 1607.92466 NaN NaN NaN -0.18616 -0.00014986 NaN NaN NaN NaN 123.31 0.62647 123.31 123.11 123.73 0 0 0 0 2.5246E-05 1 73723 88.021 69.241 1 NaN NaN 0 4736300 0 4736300 17019 1742 6425 6575 26636 26636 ILALLDALSTVHSQK 15 1 0 Unmodified _ILALLDALSTVHSQK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.6536 3 536.982162 1607.92466 82584.95 0.82904 0.00044518 -0.51413 -0.00027608 0.31491 0.0001691 536.981851552471 539.653264549379 123.09 1.2628 123.09 122.74 124 -7.6294E-06 234 55 8 0 0 0 0.00015299 2 72497 65.472 65.472 1 1.3117 1.0705 0 12764000 5314700 7449800 17020 1742 6425 6575 26637;26638 26638 ILALLDALSTVHSQK 15 1 0 Unmodified _ILALLDALSTVHSQK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 808.976 2 804.969605 1607.92466 69183.05 0.83497 0.00067213 -0.80458 -0.00064767 0.030388 2.4461E-05 804.968453895311 808.975996725403 123.1 0.61624 123.1 122.79 123.41 7.6294E-06 125 29 6 0 0 0 0.00077161 1 72639 50.354 50.354 1 1.626 1.3321 0 4969300 1835700 3133600 17021 1742 6425 6575 26639 26639 ILAMNHLK 8 1 0 Oxidation (M) _ILAM(ox)NHLK_ ILAM(1)NHLK ILAM(78.62)NHLK 0 1 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2735 2 478.273312 954.532072 NaN NaN NaN 0.17115 8.1854E-05 NaN NaN NaN NaN 21.547 0.28756 21.547 21.372 21.659 0 0 0 0 0.0029118 1 7796 78.616 35.842 1 NaN NaN 0 4743200 4743200 0 17022 897 6426 6576 26640 26640 709 ILAMNHLK 8 1 0 Oxidation (M) _ILAM(ox)NHLK_ ILAM(1)NHLK ILAM(69.38)NHLK 0 1 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.2734 2 478.273312 954.532072 NaN NaN NaN 0.34861 0.00016673 NaN NaN NaN NaN 21.226 0.33276 21.226 21.049 21.382 0 0 0 0 0.0046978 1 7349 69.383 32.355 1 NaN NaN 0 5678500 5678500 0 17023 897 6426 6576 26641 26641 709 ILAMNHLK 8 1 0 Oxidation (M) _ILAM(ox)NHLK_ ILAM(1)NHLK ILAM(89.67)NHLK 0 1 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2799 2 478.273312 954.532072 NaN NaN NaN -0.42091 -0.00020131 NaN NaN NaN NaN 21.519 0.30291 21.519 21.358 21.661 -1.9073E-06 0 0 0 0.0015171 1 7685 89.673 29.315 1 NaN NaN 0 9443300 0 9443300 17024 897 6426 6576 26642 26642 709 ILAQDVAQLK 10 1 0 Unmodified _ILAQDVAQLK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.8365 2 549.829506 1097.64446 81411.73 0.41243 0.00022677 0.20371 0.00011201 0.61614 0.00033877 549.829444465439 553.836546850419 68.62 1.1513 68.62 68.165 69.317 0 460 100 8 0 0 0 0.00089646 2 39594 79.474 79.474 1 0.82699 0.9369 0 98610000 50727000 47883000 17025 1803 6427 6577 26643;26644 26644 ILAQDVAQLK 10 1 0 Unmodified _ILAQDVAQLK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.8363 2 549.829506 1097.64446 81743.01 0.51825 0.00028495 0.038684 2.1269E-05 0.55694 0.00030622 549.829344700178 553.836457335797 67.342 0.95558 67.342 67.025 67.981 0 355 80 8 0 0 0 0.0020506 2 39740 70.856 70.856 1 0.85113 0.97438 0 162140000 87121000 75022000 17026 1803 6427 6577 26645;26646 26646 ILAQDVAQLK 10 1 0 Unmodified _ILAQDVAQLK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.8366 2 549.829506 1097.64446 81165.28 0.37428 0.00020579 0.33068 0.00018182 0.70497 0.00038761 549.829518543586 553.836696124252 78.373 1.7165 78.373 78.048 79.765 0 460 106 8 0 0 0 0.0026779 2 41949 67.993 67.993 1 1.5496 1.2484 0 22180000 8721700 13458000 17027 1803 6427 6577 26647;26648 26648 ILAQDVAQLK 10 1 0 Unmodified _ILAQDVAQLK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.8365 2 549.829506 1097.64446 81238.85 0.52744 0.00029 0.068889 3.7877E-05 0.59632 0.00032788 549.829449645807 553.836514019965 78.592 1.5737 78.592 78.261 79.834 0 436 99 8 0 0 0 0.0029629 2 41296 66.692 66.692 1 1.5 1.2013 0 21677000 8479400 13197000 17028 1803 6427 6577 26649;26650 26650 ILAQVVGDVDTSLPR 15 0 1 Unmodified _ILAQVVGDVDTSLPR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.9445 2 791.943587 1581.87262 NaN NaN NaN 0.017347 1.3738E-05 NaN NaN NaN NaN 103.91 0.75041 103.91 103.46 104.21 -7.6294E-06 0 0 0 6.3081E-06 1 63898 91.961 73.65 1 NaN NaN 0 22714000 22714000 0 17029 794 6428 6578 26651 26651 ILAQVVGDVDTSLPR 15 0 1 Unmodified _ILAQVVGDVDTSLPR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.951 2 791.943587 1581.87262 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.57 1 103.57 103.07 104.07 0 0 0 0 1.0185E-11 1 63887 117.23 90.635 1 17030 794 6428 6578 26652 26652 ILAQVVGDVDTSLPR 15 0 1 Unmodified _ILAQVVGDVDTSLPR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 796.95 2 791.943587 1581.87262 68256.41 1.1334 0.00089755 0.33777 0.00026749 1.4711 0.001165 792.445208104829 796.948106009176 115.77 0.50867 115.77 115.51 116.02 0 108 22 8 0 0 0 3.7133E-08 3 67829 111.94 111.94 1 0.82061 0.67592 0 18228000 10467000 7760600 17031 794 6428 6578 26653;26654;26655 26653 ILAQVVGDVDTSLPR 15 0 1 Unmodified _ILAQVVGDVDTSLPR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 796.9491 2 791.943587 1581.87262 69539.11 0.8458 0.00066982 -0.058501 -4.633E-05 0.78729 0.00062349 791.943465752783 796.947721326085 115.48 0.66067 115.48 115.28 115.94 0 100 31 6 0 0 0 2.4507E-05 2 66775 87.001 87.001 1 0.94975 0.77407 0 12678000 6263100 6414600 17032 794 6428 6578 26656;26657 26656 ILATDVSSK 9 1 0 Unmodified _ILATDVSSK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.267 2 467.266207 932.517862 91301.07 -0.036488 -1.705E-05 -0.0088213 -4.1219E-06 -0.045309 -2.1172E-05 467.266051217249 471.273331124025 30.146 0.43283 30.146 30 30.433 0 133 35 6 0 0 0 0.0096208 2 14681 60.019 28.084 1 0.69482 0.69995 0 27884000 15170000 12715000 17033 1681 6429 6579 26658;26659 26658 ILATTPSAVFR 11 0 1 Unmodified _ILATTPSAVFR_ 0 0 0 B4DDU7;Q53HS1;Q9NRG9;F8VZ44;H3BU82 B4DDU7 B4DDU7 AAAS Aladin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.3473 2 588.342781 1174.67101 87405.87 0.57062 0.00033572 1.2243 0.00072029 1.7949 0.001056 588.342276245322 593.347772412118 83.398 0.44685 83.398 83.267 83.713 0 56 36 4 0 0 0 0.0058056 1 49906 55.549 19.103 1 3.3224 3.3148 0 8729900 1423800 7306100 17034 961 6430 6580 26660 26660 ILCDVPCSGDGTMR 14 0 1 Oxidation (M) _ILCDVPCSGDGTM(ox)R_ ILCDVPCSGDGTM(1)R ILCDVPCSGDGTM(56.36)R 0 1 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.8492 2 798.844375 1595.6742 69984.75 0.69255 0.00055324 -0.44369 -0.00035444 0.24886 0.0001988 799.345848056344 803.848519937454 45.78 0.39304 45.78 45.563 45.956 0 102 34 4 0 0 0 0.0005156 2 25191 56.359 49.506 1 1.6909 1.6957 0 11273000 5799500 5473300 17035 1694 6431 6581 26661;26662 26661 1523 ILCEQCMTSNQK 12 1 0 Oxidation (M) _ILCEQCM(ox)TSNQK_ ILCEQCM(1)TSNQK ILCEQCM(119.68)TSNQK 0 1 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.3348 2 764.333643 1526.65273 71263.91 0.36593 0.00027969 -0.42473 -0.00032463 -0.0588 -4.4943E-05 764.333749778924 768.84123589855 20.768 0.21073 20.768 20.66 20.871 0 32 7 6 0 0 0 1.2211E-08 1 7201 119.68 117.53 1 0.78459 0.77324 0 8551100 4657600 3893500 17036 591 6432 6582 26663 26663 448 ILCEQCMTSNQK 12 1 0 Oxidation (M) _ILCEQCM(ox)TSNQK_ ILCEQCM(1)TSNQK ILCEQCM(50.28)TSNQK 0 1 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.342 2 764.333643 1526.65273 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.849 1 20.849 20.349 21.349 1.9073E-06 0 0 0 0.010101 1 7243 50.284 42.903 1 17037 591 6432 6582 26664 26664 448 ILCEQCMTSNQK 12 1 0 Oxidation (M) _ILCEQCM(ox)TSNQK_ ILCEQCM(1)TSNQK ILCEQCM(81.34)TSNQK 0 1 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.3331 2 764.333643 1526.65273 72109.25 0.76424 0.00058414 -0.18773 -0.00014349 0.57652 0.00044065 764.333285486482 768.341513525181 20.699 0.22195 20.699 20.569 20.791 -1.9073E-06 20 6 5 0 0 0 0.00010306 2 6994 81.338 74.407 1 0.77478 0.78311 0 8657900 5432800 3225100 17038 591 6432 6582 26665;26666 26665 448 ILCFYGPPGVGK 12 1 0 Unmodified _ILCFYGPPGVGK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;K7ER27 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.3505 2 654.344466 1306.67438 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.399 1 93.399 92.899 93.899 0 0 0 0 0.028936 1 56653 46.39 10.849 1 17039 946 6433 6583 26667 26667 ILDAVVAQEPLHR 13 0 1 Unmodified _ILDAVVAQEPLHR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;K7EP67;K7EJ74 B4DZB1 B4DZB1 U5-116KD;EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.9149 2 730.914633 1459.81471 79291.81 0.66435 0.00048558 -0.2743 -0.00020049 0.39005 0.00028509 730.914941457929 735.918801398092 83.211 0.34612 83.211 83.036 83.382 -7.6294E-06 48 18 5 0 0 0 0.052025 1 44538 37.968 37.968 1 1.0281 0.92706 0 743250 383630 359630 17040 794 6434 6584 26668 26668 ILDDDTIITTLENLK 15 1 0 Unmodified _ILDDDTIITTLENLK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.9739 2 858.966925 1715.9193 67115.28 1.2589 0.0010813 -0.51307 -0.00044071 0.7458 0.00064062 858.966140627445 863.474753202977 131.18 0.64394 131.18 130.78 131.43 0 148 42 6 0 0 0 4.8022E-15 2 85487 126.76 126.76 1 2.0837 2.0711 0 9581200 3474600 6106600 17041 1729 6435 6585 26669;26670 26669 ILDDDTIITTLENLK 15 1 0 Unmodified _ILDDDTIITTLENLK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.9738 2 858.966925 1715.9193 66521.56 0.91051 0.0007821 0.1148 9.8613E-05 1.0253 0.00088071 858.966517145005 862.97345381651 130.81 0.55795 130.81 130.5 131.06 0 148 38 7 0 0 0 4.4612E-15 2 87348 127.56 117.37 1 2.2179 2.216 0 14130000 4863600 9266800 17042 1729 6435 6585 26671;26672 26671 ILDDTEDTVVSQR 13 0 1 Unmodified _ILDDTEDTVVSQR_ 0 0 0 P42696;A2A2V2;Q5TCT4 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.8746 2 745.870285 1489.72602 70585.75 0.57736 0.00043063 -0.028205 -2.1037E-05 0.54915 0.0004096 745.870254352294 750.874316258455 58.137 0.81744 58.137 57.844 58.661 0 371 65 8 0 0 0 5.4382E-24 2 32839 160.18 149.81 1 0.95038 1.0295 0 49501000 23089000 26412000 17043 1566 6436 6586 26673;26674 26674 ILDDTEDTVVSQR 13 0 1 Unmodified _ILDDTEDTVVSQR_ 0 0 0 P42696;A2A2V2;Q5TCT4 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.8745 2 745.870285 1489.72602 70550.45 0.46908 0.00034987 0.017681 1.3188E-05 0.48676 0.00036306 745.870240323719 750.874440866938 57.291 0.82518 57.291 56.92 57.745 0 370 64 8 0 0 0 1.1427E-08 2 32932 115 115 1 0.94619 1.0982 0 58773000 30192000 28581000 17044 1566 6436 6586 26675;26676 26675 ILDDTEDTVVSQR 13 0 1 Unmodified _ILDDTEDTVVSQR_ 0 0 0 P42696;A2A2V2;Q5TCT4 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 750.8752 2 745.870285 1489.72602 69694.51 0.46179 0.00034443 0.024791 1.8491E-05 0.48658 0.00036292 745.870294276578 750.874396483405 67.972 0.88476 67.972 67.635 68.52 0 385 65 9 0 0 0 0.014292 2 34528 45.433 45.433 1 0.93399 0.76232 0 12891000 6072000 6818700 17045 1566 6436 6586 26677;26678 26677 ILDIDIPMSVGIIDPR 16 0 1 Oxidation (M) _ILDIDIPM(ox)SVGIIDPR_ ILDIDIPM(1)SVGIIDPR ILDIDIPM(47.56)SVGIIDPR 0 1 0 A0A024R120;Q12800;F8VWL0;F8VX55 A0A024R120 A0A024R120 TFCP2 Alpha-globin transcription factor CP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.495 2 891.987137 1781.95972 64310.35 0.69027 0.00061571 1.303 0.0011622 1.9932 0.0017779 891.987245426121 896.992512112059 125.14 0.44092 125.14 124.95 125.39 -7.6294E-06 101 28 5 0 0 0 0.00042877 2 81308 47.559 47.559 1 1.6029 1.6449 0 6487400 2544200 3943200 17046 66 6437 6587 26679;26680 26680 38 ILDLGFEK 8 1 0 Unmodified _ILDLGFEK_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.7664 2 467.765843 933.517133 98039.35 0.37978 0.00017765 1.2988 0.00060753 1.6786 0.00078518 467.766400575086 471.773525921294 87.054 0.20361 87.054 86.948 87.152 0 31 14 6 0 0 0 0.009998 1 52552 73.248 23.89 1 0.60898 0.61901 0 13819000 8200400 5618700 17047 1053;1268 6438 6588 26681 26681 ILDLGFEK 8 1 0 Unmodified _ILDLGFEK_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.7734 2 467.765843 933.517133 NaN NaN NaN 1.6993 0.00079486 NaN NaN NaN NaN 85.926 0.15611 85.926 85.817 85.973 0 0 0 0 0.042369 1 52976 52.937 15.916 1 NaN NaN 0 6733400 0 6733400 17048 1053;1268 6438 6588 26682 26682 ILDLGFEK 8 1 0 Unmodified _ILDLGFEK_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.7674 2 467.765843 933.517133 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.972 1 85.972 85.472 86.472 0 0 0 0 0.0109 1 52994 75.738 31.291 1 17049 1053;1268 6438 6588 26683 26683 ILDLLNEGSAR 11 0 1 Unmodified _ILDLLNEGSAR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.8376 2 600.832777 1199.651 78301.98 0.75624 0.00045437 -0.90647 -0.00054464 -0.15024 -9.0268E-05 600.832024047149 605.836379541093 87.066 0.5334 87.066 86.902 87.435 0 121 44 7 0 0 0 6.5951E-08 2 52535 135.43 84.725 1 0.71133 0.78609 0 57125000 30068000 27057000 17050 1745 6439 6589 26684;26685 26685 ILDLLNEGSAR 11 0 1 Unmodified _ILDLLNEGSAR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.2939 2 600.832777 1199.651 NaN NaN NaN -2.122 -0.001275 NaN NaN NaN NaN 87.679 0.046318 87.679 87.647 87.693 0 0 0 0 0.025724 1 52880 51.445 24.556 1 NaN NaN 0 4203800 4203800 0 17051 1745 6439 6589 26686 26686 ILDLLNEGSAR 11 0 1 Unmodified _ILDLLNEGSAR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.8376 2 600.832777 1199.651 78914.72 0.79786 0.00047938 -0.19759 -0.00011872 0.60026 0.00036066 600.8322882394 605.836762950134 85.936 0.4399 85.936 85.817 86.257 0 73 36 6 0 0 0 0.00019291 2 52984 93.556 60.27 1 0.80267 0.87895 0 32324000 16319000 16005000 17052 1745 6439 6589 26687;26688 26688 ILDLLNEGSAR 11 0 1 Unmodified _ILDLLNEGSAR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.8366 2 600.832777 1199.651 77983.85 0.43911 0.00026383 -1.3619 -0.00081825 -0.92276 -0.00055442 600.831930549003 605.835871187857 86.343 0.37012 86.343 86.238 86.608 0 78 32 4 0 0 0 0.0005685 1 53284 74.162 51.109 1 1.054 1.039 0 14693000 8855500 5837600 17053 1745 6439 6589 26689 26689 ILDLLNEGSAR 11 0 1 Unmodified _ILDLLNEGSAR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.8371 2 600.832777 1199.651 NaN NaN NaN -0.090858 -5.459E-05 NaN NaN NaN NaN 99.485 0.49151 99.485 99.272 99.764 0 0 0 0 4.5284E-22 1 56220 144.77 67.713 1 NaN NaN 0 9737500 0 9737500 17054 1745 6439 6589 26690 26690 ILDLLNEGSAR 11 0 1 Unmodified _ILDLLNEGSAR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.8373 2 600.832777 1199.651 NaN NaN NaN -0.10735 -6.45E-05 NaN NaN NaN NaN 99.331 0.48397 99.331 99.067 99.551 -7.6294E-06 0 0 0 0.0028137 1 55276 70.977 20.099 1 NaN NaN 0 8602300 0 8602300 17055 1745 6439 6589 26691 26691 ILDLLNEGSAR 11 0 1 Unmodified _ILDLLNEGSAR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;Q14985;O60846;Q14984 Q14807 Q14807 KIF22;OBP-2;A-328A3.5;OBP-1 Kinesin-like protein KIF22;Kinesin-like protein MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.834 2 600.832777 1199.651 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.333 1 99.333 98.833 99.833 0 0 0 0 0.0097572 1 55325 59.426 27.492 1 17056 1745 6439 6589 26692 26692 ILDLQLEFDEK 11 1 0 Unmodified _ILDLQLEFDEK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;B3KXA9 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.8691 2 681.8612 1361.70785 79106.94 1.0956 0.00074704 0.57791 0.00039406 1.6735 0.0011411 681.861740398996 685.868588751804 110.75 0.32289 110.75 110.57 110.9 0 61 21 5 0 0 0 0.0087198 1 69532 50.292 39.128 1 1.4835 1.5075 0 13757000 5332200 8425200 17057 883 6440 6590 26693 26693 ILDLQLEFDEK 11 1 0 Unmodified _ILDLQLEFDEK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;B3KXA9 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.8688 2 681.8612 1361.70785 77188.57 0.73142 0.00049873 0.209 0.00014251 0.94042 0.00064124 682.362620997311 685.868406746158 110.14 0.3964 110.14 109.95 110.35 0 83 23 6 0 0 0 3.1396E-05 2 70790 100.48 100.48 1 1.4419 1.4734 0 17312000 7338200 9974200 17058 883 6440 6590 26694;26695 26694 ILDMCAAPGSK 11 1 0 Oxidation (M) _ILDM(ox)CAAPGSK_ ILDM(1)CAAPGSK ILDM(47.84)CAAPGSK 0 1 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.7883 2 589.780841 1177.54713 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.953 1 28.953 28.453 29.453 -1.9073E-06 0 0 0 0.014926 1 13872 47.844 21.242 1 17059 1694 6441 6591 26696 26696 1524 ILDMCCAPGGK 11 1 0 Oxidation (M) _ILDM(ox)CCAPGGK_ ILDM(1)CCAPGGK ILDM(130.75)CCAPGGK 0 1 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.2725 2 619.272326 1236.5301 75803 0.44724 0.00027696 -0.40904 -0.00025331 0.038195 2.3653E-05 619.2720929003 623.279265639576 29.032 0.45782 29.032 28.866 29.324 -1.9073E-06 115 25 7 0 0 0 2.2262E-10 2 13924 130.75 121.98 1 1.2409 1.3916 0 65830000 31317000 34513000 17060 1570 6442 6592 26697;26698 26698 1347 ILDMCCAPGGK 11 1 0 Oxidation (M) _ILDM(ox)CCAPGGK_ ILDM(1)CCAPGGK ILDM(108.98)CCAPGGK 0 1 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.2723 2 619.272326 1236.5301 NaN NaN NaN -0.89673 -0.00055532 NaN NaN NaN NaN 28.245 0.38926 28.245 28.038 28.428 1.9073E-06 0 0 0 2.1084E-08 1 13467 108.98 100.11 1 NaN NaN 0 14168000 14168000 0 17061 1570 6442 6592 26699 26699 1347 ILDMCCAPGGK 11 1 0 Oxidation (M) _ILDM(ox)CCAPGGK_ ILDM(1)CCAPGGK ILDM(46)CCAPGGK 0 1 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.2729 2 619.272326 1236.5301 73753.63 0.23625 0.0001463 -0.35962 -0.0002227 -0.12337 -7.6401E-05 619.27247247678 623.279693902902 32.796 0.45218 32.796 32.594 33.046 0 103 23 6 0 0 0 0.0077899 1 14229 46.001 46.001 1 0.77424 0.61257 0 6202900 3580500 2622300 17062 1570 6442 6592 26700 26700 1347 ILDMCCAPGGK 11 1 0 Unmodified _ILDMCCAPGGK_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.2814 2 611.274869 1220.53518 75278.05 0.2723 0.00016645 -0.46841 -0.00028632 -0.1961 -0.00011987 611.274941053856 615.28200443255 59.926 0.48075 59.926 59.706 60.187 0 135 29 6 0 0 0 0.0084358 1 30586 50.805 50.805 1 1.1934 0.92748 0 3414000 1528000 1885900 17063 1570 6442 6593 26701 26701 ILDMCCAPGGK 11 1 0 Unmodified _ILDMCCAPGGK_ 0 0 0 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.2816 2 611.274869 1220.53518 78667.41 0.37646 0.00023012 0.14692 8.9807E-05 0.52338 0.00031993 611.275043181984 615.281937516198 60.359 0.35711 60.359 60.197 60.554 0 98 26 6 0 0 0 0.0060749 2 30209 55.064 55.064 1 1.2526 1.0099 0 2530500 1091200 1439300 17064 1570 6442 6593 26702;26703 26702 ILDNTSEPQPGEAR 14 0 1 Unmodified _ILDNTSEPQPGEAR_ 0 0 0 B2RAQ8;A0A024R5F4;P50416 B2RAQ8 B2RAQ8 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.8801 2 763.875901 1525.73725 72860.08 0.65226 0.00049825 -0.45052 -0.00034414 0.20174 0.0001541 764.376575338442 769.381068178149 37.611 0.28162 37.611 37.504 37.786 3.8147E-06 50 23 4 0 0 0 9.3573E-06 2 19155 99.283 89.278 1 1.536 1.5654 0 6911300 4289000 2622300 17065 179 6443 6594 26704;26705 26704 ILDNTSEPQPGEAR 14 0 1 Unmodified _ILDNTSEPQPGEAR_ 0 0 0 B2RAQ8;A0A024R5F4;P50416 B2RAQ8 B2RAQ8 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.8821 2 763.875901 1525.73725 71163.41 0.6269 0.00047888 -0.71071 -0.00054289 -0.083805 -6.4016E-05 764.376425913414 768.880218724388 36.732 0.38044 36.732 36.57 36.95 0 56 25 4 0 0 0 2.8751E-09 1 18935 114.83 101.88 1 1.1678 1.1567 0 12222000 7378400 4843200 17066 179 6443 6594 26706 26706 ILDPEGLALGAVIASSK 17 1 0 Unmodified _ILDPEGLALGAVIASSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.9847 2 827.47472 1652.93489 67377.51 0.87511 0.00072413 0.10481 8.6725E-05 0.97992 0.00081086 827.474830166897 831.481839199657 123.79 0.87783 123.79 123.47 124.35 0 414 61 10 0 0 0 4.2463E-09 2 80169 105.19 105.19 1 0.89999 1.0156 0 110300000 55808000 54488000 17067 1898 6444 6595 26707;26708 26708 ILDPEGLALGAVIASSK 17 1 0 Unmodified _ILDPEGLALGAVIASSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.4751 2 827.47472 1652.93489 67395.59 1.0056 0.0008321 -0.032241 -2.6679E-05 0.97334 0.00080542 827.474704070895 831.481625689879 123.38 0.81967 123.38 123.05 123.87 0 451 59 10 0 0 0 1.6719E-07 2 81749 98.592 98.592 1 0.92627 1.0384 0 112940000 59694000 53249000 17068 1898 6444 6595 26709;26710 26710 ILDPEGLALGAVIASSK 17 1 0 Unmodified _ILDPEGLALGAVIASSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.9844 2 827.47472 1652.93489 64807.97 0.89452 0.00074019 -0.028659 -2.3715E-05 0.86586 0.00071648 827.474834065406 831.481693572723 134.68 0.21121 134.68 134.59 134.8 0 27 4 9 0 0 0 1.4253E-26 2 82367 150.26 150.26 1 1.1311 0.97301 0 89797000 41980000 47818000 17069 1898 6444 6595 26711;26712 26711 ILDPEGLALGAVIASSK 17 1 0 Unmodified _ILDPEGLALGAVIASSK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.4833 2 827.47472 1652.93489 65911.14 0.948 0.00078445 0.34338 0.00028414 1.2914 0.0010686 827.475294269033 831.482041211762 134.64 0.22928 134.64 134.53 134.76 0 30 5 8 0 0 0 2.6625E-18 2 81424 134.04 134.04 1 1.079 0.92311 0 115660000 55563000 60101000 17070 1898 6444 6595 26713;26714 26713 ILDSAEFIK 9 1 0 Unmodified _ILDSAEFIK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9;B4DM07 X5D2J9 X5D2J9 GTF2I General transcription factor II-I ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.2899 2 518.289682 1034.56481 NaN NaN NaN 0.53564 0.00027762 NaN NaN NaN NaN 81.159 0.55346 81.159 80.959 81.512 0 0 0 0 0.012937 1 48324 64.42 35.908 1 NaN NaN 0 10833000 10833000 0 17071 789 6445 6596 26715 26715 ILDSAEFIK 9 1 0 Unmodified _ILDSAEFIK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9;B4DM07 X5D2J9 X5D2J9 GTF2I General transcription factor II-I ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.29 2 518.289682 1034.56481 NaN NaN NaN 0.35419 0.00018357 NaN NaN NaN NaN 80.068 0.48194 80.068 79.892 80.374 -7.6294E-06 0 0 0 0.034993 2 48721 51.864 22.762 1 NaN NaN 0 20043000 20043000 0 17072 789 6445 6596 26716;26717 26716 ILDSFAAAPVPTTTLVLK 18 1 0 Unmodified _ILDSFAAAPVPTTTLVLK_ 0 0 0 P18583;D3DSF7;B3KRA1 P18583 P18583 SON Protein SON MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.5448 2 929.040227 1856.0659 64610.26 0.66736 0.00062001 -0.0057295 -5.323E-06 0.66163 0.00061468 929.541544445145 933.047075862576 122.14 0.47117 122.14 121.95 122.42 7.6294E-06 173 32 8 0 0 0 0.000741 1 78995 41.401 41.401 1 1.1922 1.2369 0 17017000 8610800 8406500 17073 1499 6446 6597 26718 26718 ILDSFAAAPVPTTTLVLK 18 1 0 Unmodified _ILDSFAAAPVPTTTLVLK_ 0 0 0 P18583;D3DSF7;B3KRA1 P18583 P18583 SON Protein SON MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.0406 2 929.040227 1856.0659 64545.25 0.53959 0.0005013 0.0054813 5.0923E-06 0.54507 0.00050639 929.0399903655 933.04722612792 121.66 0.43948 121.66 121.46 121.9 7.6294E-06 183 32 8 0 0 0 0.0045649 1 80525 33.968 33.968 1 1.1606 1.203 0 18755000 8668900 10086000 17074 1499 6446 6597 26719 26719 ILDSVGIEADDDR 13 0 1 Unmodified _ILDSVGIEADDDR_ 0 0 0 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.3444 2 709.343903 1416.67325 72034.92 0.65888 0.00046737 -0.63341 -0.0004493 0.025475 1.8071E-05 709.343552807807 714.347694777104 70.445 0.96008 70.445 70.028 70.988 0 300 78 6 0 0 0 1.1823E-08 1 42155 113.22 99.426 1 0.71486 0.79737 0 44072000 29592000 14481000 17075 356 6447 6598 26720 26720 ILDSVGIEADDDRLNK 16 1 1 Unmodified _ILDSVGIEADDDRLNK_ 0 0 1 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.9665 2 886.95488 1771.89521 64735 0.71047 0.00063015 0.16045 0.00014231 0.87092 0.00077246 886.955013736259 895.966037474593 70.751 0.59965 70.751 70.492 71.091 0 244 48 7 0 0 0 1.9606E-05 2 41084 99.215 93.609 1 0.82506 0.9721 0 34592000 19237000 15354000 17076 356 6448 6599 26721;26722 26722 ILDSVGIEADDDRLNK 16 1 1 Unmodified _ILDSVGIEADDDRLNK_ 0 0 1 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.6466 3 591.639012 1771.89521 77645.66 0.7719 0.00045669 -0.29849 -0.0001766 0.47341 0.00028009 591.638921126873 597.646328094279 70.743 1.2427 70.743 70.378 71.621 0 636 103 11 0 0 0 0.00047271 2 41110 46.964 46.964 1 0.76355 0.92756 0 401890000 218590000 183300000 17077 356 6448 6599 26723;26724 26724 ILDSVGIEADDDRLNK 16 1 1 Unmodified _ILDSVGIEADDDRLNK_ 0 0 1 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.967 2 886.95488 1771.89521 65159.33 0.3479 0.00030857 0.45298 0.00040178 0.80088 0.00071034 887.456884579441 895.966135043406 69.579 0.67532 69.579 69.238 69.913 0 251 56 7 0 0 0 1.3986E-16 2 41266 121.02 121.02 1 0.77615 0.90103 0 37493000 22387000 15106000 17078 356 6448 6599 26725;26726 26725 ILDSVGIEADDDRLNK 16 1 1 Unmodified _ILDSVGIEADDDRLNK_ 0 0 1 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.6395 3 591.639012 1771.89521 77907.34 0.5255 0.0003109 -0.30262 -0.00017904 0.22287 0.00013186 591.638933632326 597.646305343546 69.538 1.1666 69.538 69.138 70.304 0 644 96 10 0 0 0 0.00011573 3 41620 57.525 57.525 1 0.74846 0.88993 0 411690000 239130000 172560000 17079 356 6448 6599 26727;26728;26729 26729 ILDSVGIEADDDRLNK 16 1 1 Unmodified _ILDSVGIEADDDRLNK_ 0 0 1 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 886.9554 2 886.95488 1771.89521 65614.6 0.34595 0.00030685 1.1163 0.0009901 1.4622 0.0012969 887.458096403626 896.468726751081 80.712 0.55458 80.712 80.417 80.972 7.6294E-06 184 38 8 0 0 0 0.0025286 1 43603 61.11 61.11 1 0.69274 0.57349 0 5626000 3845600 1780500 17080 356 6448 6599 26730 26730 ILDSVGIEADDDRLNK 16 1 1 Unmodified _ILDSVGIEADDDRLNK_ 0 0 1 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 886.9553 2 886.95488 1771.89521 64391.54 0.2988 0.00026503 1.1105 0.00098493 1.4093 0.00125 886.955366088122 896.468437253767 80.885 0.59524 80.885 80.633 81.228 0 145 42 5 0 0 0 0.0020189 1 42904 55.899 55.899 1 0.61326 0.51444 0 5132100 2884700 2247400 17081 356 6448 6599 26731 26731 ILDVASLEVLNEVNR 15 0 1 Unmodified _ILDVASLEVLNEVNR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.473 2 842.467426 1682.9203 NaN NaN NaN 0.16795 0.0001415 NaN NaN NaN NaN 119.78 0.43456 119.78 119.58 120.01 0 0 0 0 4.0136E-23 1 77067 138.45 117.66 1 NaN NaN 0 4295700 0 4295700 17082 1205 6449 6600 26732 26732 ILDVGFEEELK 11 1 0 Unmodified _ILDVGFEEELK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.343 2 646.342643 1290.67073 75148.85 0.97761 0.00063187 0.32617 0.00021081 1.3038 0.00084269 646.342692283358 650.35036676258 100.83 1.6989 100.83 99.849 101.55 0 469 135 6 0 0 0 1.0388E-05 2 61699 108.67 89.564 1 1.0903 1.2795 0 302860000 151900000 150960000 17083 303 6450 6601 26733;26734 26734 ILDVGFEEELK 11 1 0 Unmodified _ILDVGFEEELK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.3507 2 646.342643 1290.67073 75233.66 0.82439 0.00053284 -0.031205 -2.0169E-05 0.79318 0.00051267 646.342594063527 650.3495726879 100.05 1.1938 100.05 99.62 100.81 7.6294E-06 609 95 10 0 0 0 7.8316E-06 2 62593 109.66 91.224 1 1.0285 1.19 0 204630000 96357000 108270000 17084 303 6450 6601 26735;26736 26735 ILDVGFEEELK 11 1 0 Unmodified _ILDVGFEEELK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.3503 2 646.342643 1290.67073 75753.97 1.0187 0.00065841 0.085898 5.552E-05 1.1046 0.00071393 646.342768927381 650.349777682174 112.97 1.0367 112.97 112.71 113.74 0 275 49 10 0 0 0 7.8874E-05 2 65656 98.048 87.762 1 1.5707 1.3421 0 67092000 25691000 41402000 17085 303 6450 6601 26737;26738 26737 ILDVGFEEELK 11 1 0 Unmodified _ILDVGFEEELK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.3498 2 646.342643 1290.67073 75519.12 0.70956 0.00045862 0.19205 0.00012413 0.90161 0.00058275 646.342817259033 650.349877214587 112.91 1.0122 112.91 112.54 113.56 0 296 48 10 0 0 0 6.5485E-08 2 64644 114.97 96.743 1 1.5595 1.3094 0 49019000 19817000 29202000 17086 303 6450 6601 26739;26740 26739 ILEAQETFYQQVK 13 1 0 Unmodified _ILEAQETFYQQVK_ 0 0 0 H0YLC9;H0YL20;H0YKG7;B4DFJ1;Q9BSI4 H0YLC9 H0YLC9 TINF2 TERF1-interacting nuclear factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.925 2 798.917038 1595.81952 NaN NaN NaN -0.25128 -0.00020075 NaN NaN NaN NaN 80.633 0.17144 80.633 80.518 80.69 -7.6294E-06 0 0 0 0.00049515 1 47907 83.499 55.878 1 NaN NaN 0 2142800 0 2142800 17087 970 6451 6602 26741 26741 ILEAQETFYQQVK 13 1 0 Unmodified _ILEAQETFYQQVK_ 0 0 0 H0YLC9;H0YL20;H0YKG7;B4DFJ1;Q9BSI4 H0YLC9 H0YLC9 TINF2 TERF1-interacting nuclear factor 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.924 2 798.917038 1595.81952 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.565 1 79.565 79.065 80.065 0 0 0 0 0.0014639 1 48359 73.067 53.28 1 17088 970 6451 6602 26742 26742 ILEAQETFYQQVK 13 1 0 Unmodified _ILEAQETFYQQVK_ 0 0 0 H0YLC9;H0YL20;H0YKG7;B4DFJ1;Q9BSI4 H0YLC9 H0YLC9 TINF2 TERF1-interacting nuclear factor 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.9181 2 798.917038 1595.81952 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.616 1 79.616 79.116 80.116 0 0 0 0 0.004185 1 48398 61.353 22.335 1 17089 970 6451 6602 26743 26743 ILEAQETFYQQVK 13 1 0 Unmodified _ILEAQETFYQQVK_ 0 0 0 H0YLC9;H0YL20;H0YKG7;B4DFJ1;Q9BSI4 H0YLC9 H0YLC9 TINF2 TERF1-interacting nuclear factor 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 802.9241 2 798.917038 1595.81952 NaN NaN NaN -0.50615 -0.00040437 NaN NaN NaN NaN 92.259 0.64378 92.259 91.884 92.528 0 0 0 0 0.0032009 1 50559 66.056 49.482 1 NaN NaN 0 1237400 0 1237400 17090 970 6451 6602 26744 26744 ILEDNSIPQVK 11 1 0 Unmodified _ILEDNSIPQVK_ 0 0 0 P11177 P11177 P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.3549 2 628.34826 1254.68197 78765.84 0.75215 0.00047261 0.11176 7.0224E-05 0.86391 0.00054283 629.351665129827 632.354910886908 67.948 0.7375 67.948 67.691 68.428 0 246 63 7 0 0 0 0.03337 1 39210 46.462 46.462 1 1.3011 1.2745 0 21839000 12068000 9771900 17091 1468 6452 6603 26745 26745 ILEDVVGVPEK 11 1 0 Unmodified _ILEDVVGVPEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.3477 2 599.339904 1196.66525 78111.48 0.62277 0.00037325 0.087114 5.2211E-05 0.70988 0.00042546 599.34004377496 603.347154124077 91.755 1.335 91.755 91.361 92.696 0 431 82 8 0 0 0 0.0081792 2 50923 51.268 51.268 1 1.288 1.0047 0 15911000 7465600 8445300 17092 1837 6453 6604 26746;26747 26747 ILEDVVGVPEK 11 1 0 Unmodified _ILEDVVGVPEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.347 2 599.339904 1196.66525 78493.97 0.50539 0.0003029 -0.24071 -0.00014427 0.26469 0.00015864 599.339991428822 603.347061658192 91.663 1.5414 91.663 91.217 92.758 0 477 93 8 0 0 0 0.003246 2 50033 60.167 60.167 1 1.2235 0.98252 0 14855000 6353500 8501200 17093 1837 6453 6604 26748;26749 26749 ILEEIDTLILPENFK 15 1 0 Unmodified _ILEEIDTLILPENFK_ 0 0 0 A0A0S2Z3K4;J3QTA2;Q99933 A0A0S2Z3K4 A0A0S2Z3K4 BAG1 BAG family molecular chaperone regulator 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.4973 2 893.995485 1785.97642 NaN NaN NaN 0.11497 0.00010278 NaN NaN NaN NaN 128.77 0.28537 128.77 128.58 128.86 1.5259E-05 0 0 0 6.9071E-07 1 83951 119.45 95.157 1 NaN NaN 0 16041000 16041000 0 17094 551 6454 6605 26750 26750 ILEEIDTLILPENFK 15 1 0 Unmodified _ILEEIDTLILPENFK_ 0 0 0 A0A0S2Z3K4;J3QTA2;Q99933 A0A0S2Z3K4 A0A0S2Z3K4 BAG1 BAG family molecular chaperone regulator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.9965 2 893.995485 1785.97642 64446.02 0.51773 0.00046285 0.8667 0.00077483 1.3844 0.0012377 893.996877343519 898.504714180651 128.39 0.20187 128.39 128.27 128.47 0 43 12 7 0 0 0 8.1311E-22 1 85792 140.31 99.032 1 0.31179 0.32011 0 32112000 22388000 9724000 17095 551 6454 6605 26751 26751 ILEFIAVSQLR 11 0 1 Unmodified _ILEFIAVSQLR_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;A4VCH6;K7ER27 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.8907 2 644.884813 1287.75507 78317.4 0.80574 0.00051961 0.064023 4.1288E-05 0.86976 0.0005609 644.884759089014 649.889046304171 115.47 0.81873 115.47 115.19 116.01 -7.6294E-06 133 53 6 0 0 0 0.00042966 1 73346 79.148 70.928 1 4.1619 4.1685 0 9022000 1958200 7063800 17096 946 6455 6606 26752 26752 ILEFIAVSQLR 11 0 1 Unmodified _ILEFIAVSQLR_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;A4VCH6;K7ER27 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.8915 2 644.884813 1287.75507 77952.82 0.96989 0.00062547 -0.0051999 -3.3533E-06 0.96469 0.00062211 644.884738187075 649.888921919195 114.84 0.64665 114.84 114.61 115.26 0 127 41 5 0 0 0 2.3128E-05 1 74680 103.7 103.7 1 3.6034 3.5744 0 11996000 2359600 9636400 17097 946 6455 6606 26753 26753 ILEGGPILPK 10 1 0 Unmodified _ILEGGPILPK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.8239 2 518.823692 1035.63283 84837.02 0.39193 0.00020334 -0.48763 -0.00025299 -0.095699 -4.9651E-05 518.823355397477 522.830449358739 78.621 0.81172 78.621 78.349 79.161 0 345 71 7 0 0 0 0.0058472 2 47600 59.597 32.343 1 0.75458 0.8695 0 181630000 100190000 81445000 17098 1837 6456 6607 26754;26755 26754 ILEGGPILPK 10 1 0 Unmodified _ILEGGPILPK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.8239 2 518.823692 1035.63283 NaN NaN NaN 0.092407 4.7943E-05 NaN NaN NaN NaN 90.898 0.93906 90.898 90.543 91.482 0 0 0 0 2.3553E-05 1 50371 103.56 67.683 1 NaN NaN 0 7286200 7286200 0 17099 1837 6456 6607 26756 26756 ILEGGPILPK 10 1 0 Unmodified _ILEGGPILPK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.8235 2 518.823692 1035.63283 NaN NaN NaN 0.10201 5.2927E-05 NaN NaN NaN NaN 90.711 0.93034 90.711 90.398 91.328 0 0 0 0 2.3553E-05 1 49441 103.56 67.683 1 NaN NaN 0 6843900 6843900 0 17100 1837 6456 6607 26757 26757 ILELAGNAAR 10 0 1 Unmodified _ILELAGNAAR_ 0 0 0 Q92646 Q92646 Q92646 H2A/k Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.3023 2 514.298373 1026.58219 85880.62 0.28597 0.00014707 -0.71967 -0.00037013 -0.4337 -0.00022305 514.297846882621 519.302144702564 54.91 0.90318 54.91 54.613 55.516 -3.8147E-06 247 87 4 0 0 0 0.00089646 1 30806 79.474 33.048 1 0.97876 0.99899 0 30872000 17353000 13520000 17101 1951 6457 6608 26758 26758 ILELAGNAAR 10 0 1 Unmodified _ILELAGNAAR_ 0 0 0 Q92646 Q92646 Q92646 H2A/k Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.2981 2 514.298373 1026.58219 85808.2 0.41506 0.00021347 -0.27054 -0.00013914 0.14452 7.4327E-05 514.298196021291 519.302094261437 53.846 0.96883 53.846 53.508 54.477 0 261 88 5 0 0 0 1.5297E-05 2 30787 101.25 55.535 1 0.9056 1.0112 0 44328000 23920000 20408000 17102 1951 6457 6608 26759;26760 26760 ILELDQELIK 10 1 0 Unmodified _ILELDQELIK_ 0 0 0 Q92878;E7EN38;Q32P42;E7ESD9;A8K3I2 Q92878 Q92878 RAD50 DNA repair protein RAD50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.3562 2 607.355554 1212.69655 80612.78 0.64095 0.00038929 0.1315 7.987E-05 0.77246 0.00046916 607.356115616354 611.362569497951 101.47 0.71231 101.47 101.16 101.87 0 162 53 5 0 0 0 0.0030193 1 62289 66.435 66.435 1 0.64143 0.65978 0 10730000 6074000 4655800 17103 1953 6458 6609 26761 26761 ILELDQELIK 10 1 0 Unmodified _ILELDQELIK_ 0 0 0 Q92878;E7EN38;Q32P42;E7ESD9;A8K3I2 Q92878 Q92878 RAD50 DNA repair protein RAD50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.3563 2 607.355554 1212.69655 78998.71 0.97418 0.00059167 -1.4247 -0.00086531 -0.45053 -0.00027363 607.354021824346 611.362565489928 113.68 0.7002 113.68 113.46 114.16 0 101 31 6 0 0 0 0.028407 1 66272 43.442 35.517 1 0.30243 0.2458 0 2698800 1969100 729720 17104 1953 6458 6609 26762 26762 ILELDQFK 8 1 0 Unmodified _ILELDQFK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.292 2 503.2844 1004.55425 NaN NaN NaN 0.065072 3.275E-05 NaN NaN NaN NaN 86.821 0.64597 86.821 86.546 87.192 0 0 0 0 0.010317 1 52267 77.058 21.382 1 NaN NaN 0 37703000 0 37703000 17105 82 6459 6610 26763 26763 ILELDQFK 8 1 0 Unmodified _ILELDQFK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.2844 2 503.2844 1004.55425 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.744 1 86.744 86.244 87.244 0 0 0 0 0.0049299 1 52288 87.323 22.07 1 17106 82 6459 6610 26764 26764 ILELDQFK 8 1 0 Unmodified _ILELDQFK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.2832 2 503.2844 1004.55425 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.789 1 87.789 87.289 88.289 0 0 0 0 0.0046702 1 52949 88.942 23.905 1 17107 82 6459 6610 26765 26765 ILELDQFK 8 1 0 Unmodified _ILELDQFK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.2915 2 503.2844 1004.55425 NaN NaN NaN -0.025563 -1.2866E-05 NaN NaN NaN NaN 99.114 0.59341 99.114 98.922 99.516 0 0 0 0 0.010177 1 55983 77.282 20.105 1 NaN NaN 0 2511600 0 2511600 17108 82 6459 6610 26766 26766 ILELDQFK 8 1 0 Unmodified _ILELDQFK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 503.2842 2 503.2844 1004.55425 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.041 1 99.041 98.541 99.541 0 0 0 0 0.0097301 1 55934 77.282 13.803 1 17109 82 6459 6610 26767 26767 ILELSGSSSEDSEK 14 1 0 Unmodified _ILELSGSSSEDSEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.8608 2 740.8543 1479.69405 70200.66 0.8637 0.00063988 -0.42627 -0.0003158 0.43743 0.00032407 740.854298929836 744.861243002582 48.572 0.90519 48.572 48.152 49.057 0 441 71 9 0 0 0 3.1298E-14 2 26325 127.87 127.87 1 0.73332 0.82553 0 118090000 73271000 44817000 17110 1665 6460 6611 26768;26769 26769 ILELSGSSSEDSEK 14 1 0 Unmodified _ILELSGSSSEDSEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8616 2 740.8543 1479.69405 70341.88 0.79082 0.00058588 0.093616 6.9356E-05 0.88444 0.00065524 740.854286822324 744.86148835322 47.507 0.68045 47.507 47.112 47.792 0 261 49 8 0 0 0 1.3103E-29 2 26261 155.15 145.46 1 0.76078 0.87309 0 168790000 99691000 69102000 17111 1665 6460 6611 26770;26771 26770 ILELSGSSSEDSEK 14 1 0 Unmodified _ILELSGSSSEDSEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.8604 2 740.8543 1479.69405 70370.97 0.71481 0.00052957 0.0012361 9.1574E-07 0.71605 0.00053049 740.854259459682 744.86125338869 55.584 1.3458 55.584 55.219 56.565 0 393 84 8 0 0 0 0.0029302 2 27743 48.004 43.754 1 0.39282 0.30738 0 16422000 11791000 4630900 17112 1665 6460 6611 26772;26773 26773 ILELSGSSSEDSEK 14 1 0 Unmodified _ILELSGSSSEDSEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.8618 2 740.8543 1479.69405 71354.47 0.65288 0.00048369 -0.29433 -0.00021806 0.35855 0.00026563 740.854241146248 744.861321179032 56.069 1.0061 56.069 55.674 56.68 0 418 68 9 0 0 0 0.00022162 2 27445 66.262 66.262 1 0.4014 0.32292 0 13839000 10023000 3816200 17113 1665 6460 6611 26774;26775 26775 ILELSGSSSEDSEK 14 1 0 Unmodified _ILELSGSSSEDSEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.855 2 740.8543 1479.69405 72005.12 0.73431 0.00054402 0.093354 6.9162E-05 0.82767 0.00061318 741.355975825373 745.36273627248 56.794 0.34798 56.794 56.569 56.917 0 72 26 4 0 0 0 0.052215 1 28117 24.853 18.164 1 0.79686 0.70117 0 969380 527220 442160 17114 1665 6460 6611 26776 26776 ILEQEEEEEQAGKPGEPSK 19 2 0 Unmodified _ILEQEEEEEQAGKPGEPSK_ 0 0 1 Q9BXP5 Q9BXP5 Q9BXP5 SRRT Serrate RNA effector molecule homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.0182 3 709.674451 2126.00152 NaN NaN NaN 0.0032503 2.3067E-06 NaN NaN NaN NaN 31.344 0.28564 31.344 31.185 31.471 0 0 0 0 0.00030402 1 15414 58.123 34.986 1 NaN NaN 0 8121900 0 8121900 17115 2013 6461 6612 26777 26777 ILEQEEEEEQAGKPGEPSK 19 2 0 Unmodified _ILEQEEEEEQAGKPGEPSK_ 0 0 1 Q9BXP5 Q9BXP5 Q9BXP5 SRRT Serrate RNA effector molecule homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.0178 3 709.674451 2126.00152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.557 1 30.557 30.057 31.057 0 0 0 0 0.0034047 1 15001 45.608 13.733 1 17116 2013 6461 6612 26778 26778 ILEQEEEEEQAGKPGEPSK 19 2 0 Unmodified _ILEQEEEEEQAGKPGEPSK_ 0 0 1 Q9BXP5 Q9BXP5 Q9BXP5 SRRT Serrate RNA effector molecule homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 715.3508 3 709.674451 2126.00152 72288.05 0.4249 0.00030154 -0.66393 -0.00047117 -0.23903 -0.00016963 709.674357499569 715.017092391133 37.155 0.34235 37.155 36.972 37.314 0 98 29 6 0 0 0 0.0052757 1 16245 24.594 24.594 1 1.3112 1.1526 0 1945900 782310 1163600 17117 2013 6461 6612 26779 26779 ILESITVSSLMATPQDPK 18 1 0 Oxidation (M) _ILESITVSSLM(ox)ATPQDPK_ ILESITVSSLM(1)ATPQDPK ILESITVSSLM(110.38)ATPQDPK 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 977.5183 2 973.511174 1945.00779 61112.83 0.48172 0.00046896 0.13348 0.00012995 0.6152 0.0005989 974.012925341913 977.518493559128 98.135 0.85034 98.135 97.811 98.661 0 504 69 9 0 0 0 1.4682E-12 2 59752 110.38 103.72 1 1.219 1.4021 0 205900000 92306000 113590000 17118 2059 6462 6613 26780;26781 26780 1887 ILESITVSSLMATPQDPK 18 1 0 Oxidation (M) _ILESITVSSLM(ox)ATPQDPK_ ILESITVSSLM(1)ATPQDPK ILESITVSSLM(65.56)ATPQDPK 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 974.0197 2 973.511174 1945.00779 61163.54 0.28987 0.00028219 0.14919 0.00014524 0.43906 0.00042743 973.511397868545 978.02001034422 97.473 0.87476 97.473 97.176 98.051 0 513 69 10 0 0 0 1.5116E-05 2 60744 65.563 59.903 1 1.2302 1.4212 0 195700000 82353000 113340000 17119 2059 6462 6613 26782;26783 26783 1887 ILESITVSSLMATPQDPK 18 1 0 Oxidation (M) _ILESITVSSLM(ox)ATPQDPK_ ILESITVSSLM(1)ATPQDPK ILESITVSSLM(63.29)ATPQDPK 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 978.0203 2 973.511174 1945.00779 61795.6 0.26134 0.00025441 -0.12531 -0.00012199 0.13603 0.00013243 974.012758907495 977.51826912881 110.94 0.94547 110.94 110.66 111.6 -7.6294E-06 282 41 11 0 0 0 1.6821E-05 1 64079 63.292 57.32 1 1.3834 1.1631 0 53905000 22417000 31489000 17120 2059 6462 6613 26784 26784 1887 ILESITVSSLMATPQDPK 18 1 0 Oxidation (M) _ILESITVSSLM(ox)ATPQDPK_ ILESITVSSLM(1)ATPQDPK ILESITVSSLM(88.09)ATPQDPK 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 977.5184 2 973.511174 1945.00779 61672.49 0.22433 0.00021839 -0.038961 -3.7929E-05 0.18537 0.00018046 973.511319907124 977.518275673169 110.9 0.89223 110.9 110.58 111.47 0 316 43 10 0 0 0 5.5892E-08 2 63075 88.087 78.654 1 1.3781 1.152 0 44044000 18030000 26014000 17121 2059 6462 6613 26785;26786 26786 1887 ILEVHIDK 8 1 0 Unmodified _ILEVHIDK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 325.5302 3 322.858804 965.554582 106101.3 0.28011 9.0435E-05 -0.18144 -5.8581E-05 0.098663 3.1854E-05 322.858712884557 325.530060750153 48.427 0.6966 48.427 48.084 48.78 0 250 54 7 0 0 0 0.036925 2 26303 26.789 4.939 1 1.2622 1.4164 0 67088000 28242000 38846000 17122 1535 6463 6614 26787;26788 26787 ILEVHIDK 8 1 0 Unmodified _ILEVHIDK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.7918 2 483.784567 965.554582 84246.45 0.27078 0.000131 -0.11837 -5.7266E-05 0.15241 7.3734E-05 483.784649265641 487.791532697599 48.446 0.48376 48.446 48.201 48.685 0 149 37 6 0 0 0 0.0091076 1 26346 75.738 1.6108 1 1.1878 1.2728 0 32528000 15558000 16971000 17123 1535 6463 6614 26789 26789 ILEVHIDK 8 1 0 Unmodified _ILEVHIDK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 322.8588 3 322.858804 965.554582 106707.1 0.34293 0.00011072 0.011295 3.6467E-06 0.35423 0.00011437 322.858756888503 325.530137004051 46.606 0.66721 46.606 46.344 47.011 0 229 56 6 0 0 0 0.03787 1 25735 28.696 5.3428 1 1.1676 1.3115 0 74678000 37872000 36806000 17124 1535 6463 6614 26790 26790 ILFAQSEPLVPSAAALAR 18 0 1 Unmodified _ILFAQSEPLVPSAAALAR_ 0 0 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 927.5289 2 927.527818 1853.04108 66286.23 0.79052 0.00073323 -0.66533 -0.00061712 0.12519 0.00011612 928.028524513034 932.531402154199 117.71 0.31308 117.71 117.55 117.86 0 74 20 5 0 0 0 0.0033464 1 75453 35.006 35.006 1 0.77659 0.79873 0 6372900 3164700 3208200 17125 1327 6464 6615 26791 26791 ILFIGGITAPTVR 13 0 1 Unmodified _ILFIGGITAPTVR_ 0 0 0 Q9BSY0;A8KAH1;P48651 Q9BSY0 Q9BSY0 PTDSS1 Phosphatidylserine synthase 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.4127 2 679.413737 1356.81292 77260.69 0.79235 0.00053833 -0.15534 -0.00010554 0.63701 0.00043279 679.915181707448 684.417771738445 116.55 0.44984 116.55 116.33 116.78 7.6294E-06 82 30 4 0 0 0 0.0013374 1 74453 73.885 73.885 1 0.9813 0.97588 0 8178200 3832900 4345300 17126 793 6465 6616 26792 26792 ILFNVVLEAR 10 0 1 Unmodified _ILFNVVLEAR_ 0 0 0 Q86U86;E7EVG2;H0Y5B5 Q86U86 Q86U86 PBRM1 Protein polybromo-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.3588 2 587.353148 1172.69174 79641.75 0.69193 0.00040641 -0.58771 -0.00034519 0.10423 6.1218E-05 587.353143717958 592.357535825937 112.4 0.39087 112.4 112.24 112.63 0 74 27 4 0 0 0 0.0015298 2 70935 73.233 42.16 1 1.0575 1.1166 0 4019800 1832400 2187500 17127 1883 6466 6617 26793;26794 26794 ILFRPVASQLPR 12 0 2 Unmodified _ILFRPVASQLPR_ 0 0 1 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.2858 3 466.285628 1395.83505 86495.61 0.41805 0.00019493 -0.16376 -7.6359E-05 0.25429 0.00011857 466.285467465219 472.957710568462 79.791 1.4353 79.791 79.228 80.664 0 722 124 8 0 0 0 3.2299E-13 2 47448 133.32 91.226 1 1.3495 1.4728 0 168450000 61607000 106850000 17128 730 6467 6618 26795;26796 26796 ILFRPVASQLPR 12 0 2 Unmodified _ILFRPVASQLPR_ 0 0 1 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2853 3 466.285628 1395.83505 87986.39 0.32407 0.00015111 -0.40447 -0.0001886 -0.080404 -3.7491E-05 466.285206049769 472.957688782911 77.714 1.2323 77.714 77.374 78.607 0 664 105 10 0 0 0 0.0004595 2 46916 62.732 47.231 1 1.4508 1.7298 0 235350000 91211000 144130000 17129 730 6467 6618 26797;26798 26797 ILFRPVASQLPR 12 0 2 Unmodified _ILFRPVASQLPR_ 0 0 1 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 472.9582 3 466.285628 1395.83505 88237.3 0.24512 0.00011429 -0.087723 -4.0904E-05 0.15739 7.339E-05 466.285502713178 472.957793356997 90.372 1.2619 90.372 90.057 91.318 -7.6294E-06 364 81 9 0 0 0 0.059007 1 49959 22.55 14.236 1 2.8039 2.3143 0 24249000 6553000 17696000 17130 730 6467 6618 26799 26799 ILGADTSVDLEETGR 15 0 1 Unmodified _ILGADTSVDLEETGR_ 0 0 0 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1;K7ESA0 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.4029 2 788.396667 1574.77878 68826.26 0.99959 0.00078807 0.77372 0.00061 1.7733 0.0013981 788.396527717145 793.401931813417 80.277 0.48044 80.277 80.095 80.575 -7.6294E-06 129 39 5 0 0 0 3.784E-07 4 47724 119.39 107.52 1 1.2078 1.2698 0 11277000 4646900 6630000 17131 1518 6468 6619 26800;26801;26802;26803 26803 ILGADTSVDLEETGR 15 0 1 Unmodified _ILGADTSVDLEETGR_ 0 0 0 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1;K7ESA0 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.3949 2 788.396667 1574.77878 70427.98 0.95583 0.00075358 0.071928 5.6708E-05 1.0278 0.00081028 788.395741822045 793.401107026318 79.457 0.42707 79.457 79.254 79.682 0 128 34 5 0 0 0 0.00051296 2 48375 71.555 62.123 1 1.3622 1.3919 0 20799000 8900800 11898000 17132 1518 6468 6619 26804;26805 26805 ILGADTSVDLEETGR 15 0 1 Unmodified _ILGADTSVDLEETGR_ 0 0 0 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1;K7ESA0 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.8996 2 788.396667 1574.77878 NaN NaN NaN 0.36127 0.00028482 NaN NaN NaN NaN 91.758 0.49912 91.758 91.543 92.042 0 0 0 0 0.0088608 1 50152 52.071 26.413 1 NaN NaN 0 1591900 1591900 0 17133 1518 6468 6619 26806 26806 ILGDPEEESWSPSLTNLEK 19 1 0 Unmodified _ILGDPEEESWSPSLTNLEK_ 0 0 0 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1072.5249 2 1072.52332 2143.03209 58438.21 0.27043 0.00029005 0.13886 0.00014893 0.40929 0.00043898 1073.02478065728 1077.03223234878 121.42 0.40963 121.42 121.26 121.67 0 125 23 8 0 0 0 0.005099 2 71322 31.827 26.65 1 1.2437 1.0133 0 6717500 3163400 3554100 17134 2052 6469 6620 26807;26808 26808 ILGENEEEEDLAESGR 16 0 1 Unmodified _ILGENEEEEDLAESGR_ 0 0 0 Q9Y4C8 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.9135 2 895.40796 1788.80137 66077.59 0.61634 0.00055187 0.11223 0.00010049 0.72857 0.00065237 895.408034347861 900.411756126751 64.257 0.4626 64.257 63.979 64.442 -7.6294E-06 115 37 5 0 0 0 2.0672E-08 2 36817 100.93 92.231 1 0.93642 0.95412 0 9918800 5110700 4808000 17135 2145 6470 6621 26809;26810 26809 ILGENEEEEDLAESGR 16 0 1 Unmodified _ILGENEEEEDLAESGR_ 0 0 0 Q9Y4C8 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.408 2 895.40796 1788.80137 63509.48 0.4223 0.00037813 -0.13558 -0.0001214 0.28672 0.00025673 895.407902892879 900.410184220772 63.173 0.43217 63.173 62.883 63.315 0 139 35 6 0 0 0 1.4862E-06 1 37125 95.401 95.401 1 0.95699 0.9581 0 9110300 4330600 4779700 17136 2145 6470 6621 26811 26811 ILGENEEEEDLAESGR 16 0 1 Unmodified _ILGENEEEEDLAESGR_ 0 0 0 Q9Y4C8 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 900.4116 2 895.40796 1788.80137 65686.3 0.5282 0.00047296 -0.40302 -0.00036087 0.12518 0.00011209 895.407790621394 900.411376565398 74.196 0.45126 74.196 73.974 74.425 0 132 29 6 0 0 0 0.0012325 1 39382 46.069 44.302 1 1.1736 1.0175 0 2060500 919580 1140900 17137 2145 6470 6621 26812 26812 ILGENEEEEDLAESGR 16 0 1 Unmodified _ILGENEEEEDLAESGR_ 0 0 0 Q9Y4C8 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 900.4102 2 895.40796 1788.80137 64814.39 0.12296 0.0001101 0.15609 0.00013976 0.27904 0.00024986 895.407934400544 900.411802002632 74.77 0.42616 74.77 74.539 74.965 0 112 24 6 0 0 0 0.0089181 1 38885 34.179 33.957 1 1.2202 1.103 0 2125000 1085300 1039700 17138 2145 6470 6621 26813 26813 ILGEVINALK 10 1 0 Unmodified _ILGEVINALK_ 0 0 0 B7Z8X5;Q59FC9;B7Z481 B7Z8X5 B7Z8X5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.3427 2 535.334424 1068.6543 84223.49 0.6843 0.00036633 -0.084297 -4.5127E-05 0.6 0.0003212 535.334375305805 539.341387897493 101.54 1.0349 101.54 101.11 102.15 0 324 80 6 0 0 0 0.02173 1 62177 46.129 8.7844 1 2.9596 2.9023 0 20640000 4372000 16268000 17139 1105 6471 6622 26814 26814 ILGGSVLHLVLALR 14 0 1 Unmodified _ILGGSVLHLVLALR_ 0 0 0 Q15843 Q15843 Q15843 NEDD8 NEDD8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.6485 3 487.648566 1459.92387 86796.27 0.32211 0.00015708 -0.47728 -0.00023275 -0.15517 -7.5668E-05 487.648371360181 490.984296479671 132.84 0.28177 132.84 132.71 132.99 0 58 13 8 0 0 0 7.7102E-06 2 86849 79.633 79.633 1 0.85738 0.89013 0 22476000 11514000 10962000 17140 1766 6472 6623 26815;26816 26816 ILGGSVLHLVLALR 14 0 1 Unmodified _ILGGSVLHLVLALR_ 0 0 0 Q15843 Q15843 Q15843 NEDD8 NEDD8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.97 2 730.969211 1459.92387 72187.91 0.78252 0.000572 -0.49406 -0.00036115 0.28846 0.00021086 730.968923215043 735.973093974914 132.85 0.14865 132.85 132.76 132.91 0 21 6 5 0 0 0 0.00024256 1 86855 63.283 63.283 1 0.75494 0.79527 0 4123500 1984700 2138800 17141 1766 6472 6623 26817 26817 ILGGSVLHLVLALR 14 0 1 Unmodified _ILGGSVLHLVLALR_ 0 0 0 Q15843 Q15843 Q15843 NEDD8 NEDD8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.3191 3 487.648566 1459.92387 86867.7 0.67776 0.00033051 -0.47258 -0.00023045 0.20518 0.00010006 487.98263796711 490.984435143345 132.75 0.40997 132.75 132.5 132.91 0 109 23 8 0 0 0 5.3492E-05 2 88943 59.185 59.185 1 0.83839 0.89803 0 25140000 15496000 9643700 17142 1766 6472 6623 26818;26819 26819 ILGGSVLHLVLALR 14 0 1 Unmodified _ILGGSVLHLVLALR_ 0 0 0 Q15843 Q15843 Q15843 NEDD8 NEDD8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.9741 2 730.969211 1459.92387 72343.02 0.98464 0.00071974 -0.20003 -0.00014622 0.78461 0.00057353 731.470039426901 735.973156713717 132.75 0.21738 132.75 132.62 132.84 0 44 13 6 0 0 0 2.9938E-09 2 88981 114.4 114.4 1 0.59063 0.60538 0 5026900 2939300 2087600 17143 1766 6472 6623 26820;26821 26820 ILGGSVLHLVLALR 14 0 1 Unmodified _ILGGSVLHLVLALR_ 0 0 0 Q15843 Q15843 Q15843 NEDD8 NEDD8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 490.9852 3 487.648566 1459.92387 88408.87 0.53717 0.00026195 -0.18057 -8.8055E-05 0.3566 0.00017389 487.648424851337 491.319088985133 134.64 0.15112 134.64 134.56 134.71 0 13 3 5 0 0 0 0.0021263 1 81457 32.275 32.275 1 1.0086 0.82413 0 13054000 5919400 7135000 17144 1766 6472 6623 26822 26822 ILGLLDAYLK 10 1 0 Unmodified _ILGLLDAYLK_ 0 0 0 Q53YD7;P26641;B4DUP0;B4DUK7 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.8517 2 559.844625 1117.6747 81500.22 0.70454 0.00039443 -0.30565 -0.00017112 0.39889 0.00022332 559.844277976651 563.851520410903 122.4 1.0683 122.4 122.03 123.1 7.6294E-06 316 77 6 0 0 0 0.00041053 2 79037 87.308 68.868 1 2.0911 2.2571 0 34699000 10658000 24041000 17145 1522 6473 6624 26823;26824 26823 ILGLLDAYLK 10 1 0 Unmodified _ILGLLDAYLK_ 0 0 0 Q53YD7;P26641;B4DUP0;B4DUK7 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.8452 2 559.844625 1117.6747 NaN NaN NaN -0.79884 -0.00044723 NaN NaN NaN NaN 122.18 0.097519 122.18 122.09 122.18 0 0 0 0 0.00089136 1 79061 88.948 59.375 1 NaN NaN 0 2617200 2617200 0 17146 1522 6473 6624 26825 26825 ILGLLDAYLK 10 1 0 Unmodified _ILGLLDAYLK_ 0 0 0 Q53YD7;P26641;B4DUP0;B4DUK7 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.8519 2 559.844625 1117.6747 80001.77 0.72892 0.00040808 -0.2788 -0.00015608 0.45012 0.00025199 559.844352542586 563.851504151165 121.81 0.9598 121.81 121.46 122.42 -7.6294E-06 348 70 8 0 0 0 0.00096714 3 80493 78.334 69.767 1 2.1582 2.3911 0 46715000 16119000 30596000 17147 1522 6473 6624 26826;26827;26828 26826 ILGLLDAYLK 10 1 0 Unmodified _ILGLLDAYLK_ 0 0 0 Q53YD7;P26641;B4DUP0;B4DUK7 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.8449 2 559.844625 1117.6747 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.35 1 122.35 121.85 122.85 0 0 0 0 0.015347 1 81148 55.549 25.976 1 17148 1522 6473 6624 26829 26829 ILGLLDAYLK 10 1 0 Unmodified _ILGLLDAYLK_ 0 0 0 Q53YD7;P26641;B4DUP0;B4DUK7 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.845 2 559.844625 1117.6747 81311.22 1.1834 0.00066251 -0.30804 -0.00017246 0.87534 0.00049006 559.844475538373 563.851376009313 134.27 0.40152 134.27 134.12 134.53 0 72 18 6 0 0 0 0.0010607 2 81905 76.827 68.606 1 1.0355 0.81705 0 5403500 2689300 2714200 17149 1522 6473 6624 26830;26831 26831 ILGLLDAYLK 10 1 0 Unmodified _ILGLLDAYLK_ 0 0 0 Q53YD7;P26641;B4DUP0;B4DUK7 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.8448 2 559.844625 1117.6747 83075.32 1.1899 0.00066616 -0.61383 -0.00034365 0.57608 0.00032252 559.844170563392 563.851229474294 134.13 0.3204 134.13 134 134.32 0 80 17 7 0 0 0 0.0032667 2 80868 65.305 57.085 1 1.1964 0.98136 0 5303800 2612600 2691200 17150 1522 6473 6624 26832;26833 26833 ILGPFHK 7 1 0 Unmodified _ILGPFHK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 406.2446 2 406.244881 810.475209 94056.79 0.12427 5.0485E-05 -0.28402 -0.00011538 -0.15975 -6.4899E-05 406.244731187585 410.251654077806 37.821 1.0425 37.821 37.413 38.456 0 392 86 7 0 0 0 0.040059 1 19327 59.641 33.463 1 0.9091 1.0408 0 188540000 100350000 88186000 17151 2070;1136 6474 6625 26834 26834 ILGPGLNK 8 1 0 Unmodified _ILGPGLNK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 410.2637 2 406.255446 810.496338 92897.55 0.10218 4.1512E-05 -0.20565 -8.3548E-05 -0.10347 -4.2036E-05 406.255384009985 410.262351310136 42.32 0.85293 42.32 42.023 42.876 0 352 67 8 0 0 0 0.0010041 2 22341 117.56 40.046 1 1.0452 1.2507 0 877290000 418980000 458310000 17152 1651 6475 6626 26835;26836 26836 ILGPGLNK 8 1 0 Unmodified _ILGPGLNK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.2625 2 406.255446 810.496338 92738.33 0.14011 5.6921E-05 0.27181 0.00011042 0.41192 0.00016735 406.2555113605 410.262566805413 40.823 1.1385 40.823 40.694 41.833 0 389 92 9 0 0 0 0.0010378 4 21837 113.08 47.752 1 1.0202 1.2062 0 1557000000 756050000 800940000 17153 1651 6475 6626 26837;26838;26839;26840 26838 ILGPGLNK 8 1 0 Unmodified _ILGPGLNK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 410.2626 2 406.255446 810.496338 92371.3 -0.24589 -9.9893E-05 0.14418 5.8574E-05 -0.10171 -4.1319E-05 406.255432683231 410.262490209147 47.636 0.77551 47.636 47.354 48.13 0 283 52 8 0 0 0 0.027969 1 23027 53.554 10.508 1 1.0774 0.88769 0 40830000 20009000 20821000 17154 1651 6475 6626 26841 26841 ILGPGLNK 8 1 0 Unmodified _ILGPGLNK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 406.2551 2 406.255446 810.496338 92878.87 -0.47158 -0.00019158 0.62085 0.00025222 0.14927 6.064E-05 406.255657225238 410.262691118901 47.581 0.75792 47.581 47.309 48.067 0 283 59 9 0 0 0 0.025086 2 22446 55.441 9.6157 1 1.1017 0.9149 0 36800000 18607000 18193000 17155 1651 6475 6626 26842;26843 26842 ILGPQGNTIK 10 1 0 Unmodified _ILGPQGNTIK_ 0 0 0 B4DDX2;Q07666;B4E043;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.816 2 520.808574 1039.60259 84262.56 0.36261 0.00018885 0.52212 0.00027193 0.88473 0.00046078 520.808698423875 524.815879645489 40.807 0.54105 40.807 40.576 41.117 0 213 46 7 0 0 0 0.00095588 2 21337 78.516 38.248 1 1.3441 1.5223 0 99406000 37097000 62309000 17156 962 6476 6627 26844;26845 26844 ILGPQGNTIK 10 1 0 Unmodified _ILGPQGNTIK_ 0 0 0 B4DDX2;Q07666;B4E043;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.8094 2 520.808574 1039.60259 83324.73 0.73304 0.00038177 0.16472 8.5789E-05 0.89776 0.00046756 520.808563124043 524.815729170243 39.653 0.4992 39.653 39.447 39.947 3.8147E-06 168 41 7 0 0 0 6.2002E-05 2 21034 98.582 55.713 1 1.4951 1.7217 0 178450000 69007000 109440000 17157 962 6476 6627 26846;26847 26847 ILGPQGNTIK 10 1 0 Unmodified _ILGPQGNTIK_ 0 0 0 B4DDX2;Q07666;B4E043;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.8157 2 520.808574 1039.60259 83085.02 0.099441 5.179E-05 0.31678 0.00016498 0.41622 0.00021677 520.808654073244 524.815737254447 46.357 0.57779 46.357 46.122 46.7 0 182 37 8 0 0 0 0.019072 1 22251 47.198 23.769 1 1.422 1.1348 0 9349400 3640000 5709400 17158 962 6476 6627 26848 26848 ILGSLYAASEDQEK 14 1 0 Unmodified _ILGSLYAASEDQEK_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.3906 2 762.383028 1522.7515 NaN NaN NaN 0.42648 0.00032514 NaN NaN NaN NaN 69.753 0.88846 69.753 69.572 70.46 0 0 0 0 3.8852E-22 1 40528 134.75 111.43 1 NaN NaN 0 39522000 0 39522000 17159 765 6477 6628 26849 26849 ILGSLYAASEDQEK 14 1 0 Unmodified _ILGSLYAASEDQEK_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 766.3907 2 762.383028 1522.7515 69123.98 0.46048 0.00035106 0.4161 0.00031723 0.87658 0.00066829 762.383986236968 766.390724041903 79.887 0.64452 79.887 79.57 80.214 0 196 39 7 0 0 0 0.00014424 1 43073 77.744 71.361 1 1.7955 1.4212 0 4994200 1741200 3252900 17160 765 6477 6628 26850 26850 ILGSLYAASEDQEK 14 1 0 Unmodified _ILGSLYAASEDQEK_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.3908 2 762.383028 1522.7515 70347.55 0.59744 0.00045547 0.48909 0.00037288 1.0865 0.00082835 762.383825499432 766.39064917055 80.113 0.65984 80.113 79.834 80.494 0 208 37 9 0 0 0 0.00023295 2 42337 64.65 52.785 1 1.8187 1.4375 0 3937900 1469200 2468700 17161 765 6477 6628 26851;26852 26852 ILGVGISTGGR 11 0 1 Unmodified _ILGVGISTGGR_ 0 0 0 Q6QNY7;Q6QNY6;Q6QNY5;Q9Y223 Q6QNY7 Q6QNY7 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.3064 2 515.306198 1028.59784 87186.65 0.58034 0.00029905 -0.1726 -8.8941E-05 0.40774 0.00021011 515.305940581751 520.310301406794 70.544 0.41188 70.544 70.378 70.79 0 86 34 4 0 0 0 0.0064337 2 41031 54.416 28.68 1 1.3451 1.3767 0 6627000 2219900 4407100 17162 1858 6478 6629 26853;26854 26853 ILGVGISTGGR 11 0 1 Unmodified _ILGVGISTGGR_ 0 0 0 Q6QNY7;Q6QNY6;Q6QNY5;Q9Y223 Q6QNY7 Q6QNY7 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.3106 2 515.306198 1028.59784 87131.56 0.52313 0.00026957 0.085005 4.3804E-05 0.60814 0.00031338 515.306027395464 520.310271989612 69.252 0.33206 69.252 69.091 69.423 0 78 27 4 0 0 0 0.0058056 2 41194 55.549 25.708 1 1.1744 1.1679 0 8338000 3784700 4553300 17163 1858 6478 6629 26855;26856 26855 ILHLQGEGDIVPK 13 1 0 Unmodified _ILHLQGEGDIVPK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.2767 3 473.604915 1417.79291 87406.48 0.096989 4.5934E-05 -0.83627 -0.00039606 -0.73928 -0.00035013 473.604536934965 476.275503363578 70.17 1.0307 70.17 69.593 70.624 0 429 84 8 0 0 0 0.00040833 1 41735 58.282 58.282 1 0.86757 0.97031 0 85855000 47392000 38463000 17164 1421 6479 6630 26857 26857 ILHLQGEGDIVPK 13 1 0 Unmodified _ILHLQGEGDIVPK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.6049 3 473.604915 1417.79291 87921.91 0.21993 0.00010416 -0.31757 -0.0001504 -0.097642 -4.6244E-05 473.604874253596 476.27587498821 81.634 1.7209 81.634 81.099 82.82 0 429 105 8 0 0 0 3.8744E-05 1 44245 78.401 78.401 1 1.3617 1.1035 0 24838000 10591000 14247000 17165 1421 6479 6630 26858 26858 ILHLQGEGDIVPK 13 1 0 Unmodified _ILHLQGEGDIVPK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.6051 3 473.604915 1417.79291 87713.99 0.31631 0.00014981 -0.13839 -6.5543E-05 0.17792 8.4262E-05 473.604923712983 476.276033902488 81.625 1.6708 81.625 81.136 82.807 0 379 94 8 0 0 0 0.0024694 2 43356 44.406 44.406 1 1.2792 1.0246 0 21677000 9425200 12252000 17166 1421 6479 6630 26859;26860 26860 ILIANTGMDTDK 12 1 0 Oxidation (M) _ILIANTGM(ox)DTDK_ ILIANTGM(1)DTDK ILIANTGM(66.43)DTDK 0 1 0 F8VQ14;F5GWF6;V9HW96;P78371 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.3367 2 654.32921 1306.64387 NaN NaN NaN -0.12994 -8.5022E-05 NaN NaN NaN NaN 44.424 0.54768 44.424 44.24 44.788 -3.8147E-06 0 0 0 0.00096118 1 24041 66.435 46.105 1 NaN NaN 0 10196000 0 10196000 17167 1255 6480 6631 26861 26861 960 ILIANTGMDTDK 12 1 0 Oxidation (M) _ILIANTGM(ox)DTDK_ ILIANTGM(1)DTDK ILIANTGM(62.3)DTDK 0 1 0 F8VQ14;F5GWF6;V9HW96;P78371 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.3382 2 654.32921 1306.64387 NaN NaN NaN -0.63605 -0.00041619 NaN NaN NaN NaN 43.837 0.43214 43.837 43.647 44.079 0 0 0 0 0.0016682 1 23967 62.303 33.216 1 NaN NaN 0 12573000 0 12573000 17168 1255 6480 6631 26862 26862 960 ILIENGVAER 10 0 1 Unmodified _ILIENGVAER_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.3224 2 557.316763 1112.61897 80879.26 0.75746 0.00042214 0.36391 0.00020281 1.1214 0.00062496 557.316833060197 562.321106907587 54.471 0.911 54.471 54.118 55.029 0 401 81 8 0 0 0 2.5807E-12 2 30571 147.51 84.028 1 0.84528 0.97892 0 167650000 88616000 79034000 17169 2023;1687 6481 6632 26863;26864 26864 ILIENGVAER 10 0 1 Unmodified _ILIENGVAER_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.3211 2 557.316763 1112.61897 79920.95 0.30209 0.00016836 0.10457 5.8276E-05 0.40666 0.00022664 557.316726613247 562.321088122302 53.299 1.1881 53.299 52.898 54.086 0 521 111 7 0 0 0 1.6945E-09 2 30446 130.75 76.59 1 0.86505 0.98427 0 114690000 65386000 49307000 17170 2023;1687 6481 6632 26865;26866 26866 ILIENGVAER 10 0 1 Unmodified _ILIENGVAER_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.3211 2 557.316763 1112.61897 80777.09 0.30864 0.00017201 0.11568 6.447E-05 0.42432 0.00023648 557.316722697125 562.320955595922 62.852 1.4756 62.852 62.29 63.765 0 519 127 7 0 0 0 0.00096714 2 32294 78.334 45.494 1 1.3513 1.1115 0 17773000 8072400 9700700 17171 2023;1687 6481 6632 26867;26868 26867 ILIENGVAER 10 0 1 Unmodified _ILIENGVAER_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.3168 2 557.316763 1112.61897 80555.1 0.35786 0.00019944 -0.048958 -2.7285E-05 0.30891 0.00017216 557.316608746155 562.320899524322 63.407 1.4413 63.407 62.769 64.21 3.8147E-06 581 125 7 0 0 0 0.00051176 2 31935 85.676 51.423 1 1.3054 1.1047 0 18285000 8540100 9745200 17172 2023;1687 6481 6632 26869;26870 26870 ILIFNIEIPITK 12 1 0 Unmodified _ILIFNIEIPITK_ 0 0 0 Q9NSX9;B7Z1K2;B7Z524;H0YDX7;J3QT46;D9YZV0;B3KNB9;A8K9E1;Q9Y450 Q9NSX9 Q9NSX9 DKFZp434G247;HBS1L HBS1-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.7148 2 707.439421 1412.86429 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.52 1 133.52 133.02 134.02 0 0 0 0 0.00031231 1 87490 81.865 61.536 1 17173 784 6482 6633 26871 26871 ILIFSSR 7 0 1 Unmodified _ILIFSSR_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.2553 2 418.255446 834.496338 91353.52 0.033302 1.3929E-05 0.059344 2.4821E-05 0.092646 3.875E-05 418.25535187868 423.259456180642 77.496 1.7416 77.496 76.369 78.111 7.6294E-06 764 143 6 0 0 0 0.0099453 4 45567 114.54 22.955 1 0.99185 1.1021 0 72952000 38014000 34938000 17174 1934 6483 6634 26872;26873;26874;26875 26873 ILIFSSR 7 0 1 Unmodified _ILIFSSR_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.2554 2 418.255446 834.496338 92189.07 0.036032 1.5071E-05 0.040255 1.6837E-05 0.076287 3.1908E-05 418.255288143835 423.259533412107 75.909 1.9347 75.909 74.983 76.918 0 744 166 6 0 0 0 0.010211 5 45780 122.79 31.206 1 0.96813 1.1015 0 125850000 64859000 60991000 17175 1934 6483 6634 26876;26877;26878;26879;26880 26879 ILIFSSR 7 0 1 Unmodified _ILIFSSR_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 423.2596 2 418.255446 834.496338 92690.93 -0.32678 -0.00013668 0.68145 0.00028502 0.35467 0.00014834 418.255692072115 423.259648884255 86.922 2.4355 86.922 86.074 88.509 0 514 152 7 0 0 0 0.030326 2 47618 68.915 13.449 1 1.3637 1.1262 0 19083000 7995700 11087000 17176 1934 6483 6634 26881;26882 26882 ILIFSSR 7 0 1 Unmodified _ILIFSSR_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 418.2554 2 418.255446 834.496338 92551.81 -0.37402 -0.00015643 0.69816 0.00029201 0.32414 0.00013557 418.255678309602 423.259690432653 86.93 2.8532 86.93 86.082 88.935 0 615 169 7 0 0 0 0.037563 2 47278 60.788 8.1047 1 1.3807 1.1663 0 17956000 7931100 10025000 17177 1934 6483 6634 26883;26884 26884 ILIHSVSLSSSPNIMLLHR 19 0 1 Oxidation (M) _ILIHSVSLSSSPNIM(ox)LLHR_ ILIHSVSLSSSPNIM(1)LLHR ILIHSVSLSSSPNIM(41.91)LLHR 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 534.3024 4 534.051675 2132.17759 82378.31 0.5263 0.00028107 -0.25754 -0.00013754 0.26876 0.00014353 534.302320854915 536.553753273303 108.17 0.56766 108.17 107.96 108.53 0 144 27 8 0 0 0 0.00010583 1 61124 41.912 41.912 1 0.71573 0.61548 0 21765000 12394000 9370300 17178 486 6484 6635 26885 26885 332 ILIIGESGVGK 11 1 0 Unmodified _ILIIGESGVGK_ 0 0 0 Q9NP72;B7Z4P9;Q9BZT2;Q5W0J0;A0A087X163;B7Z5V3 Q9NP72 Q9NP72 RAB18 Ras-related protein Rab-18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3391 2 543.331882 1084.64921 85771.14 0.67621 0.0003674 0.67121 0.00036469 1.3474 0.0007321 543.33205191336 547.339058687211 78.973 0.52701 78.973 78.709 79.236 0 149 44 5 0 0 0 0.0020494 2 47843 62.823 39.394 1 2.5955 2.5918 0 15088000 3974800 11113000 17179 2055 6485 6636 26886;26887 26886 ILILGLDGAGK 11 1 0 Unmodified _ILILGLDGAGK_ 0 0 0 F8VYN9;P40616;F8VP99;F8VP63;B4DR16 F8VYN9 F8VYN9 ARL1 ADP-ribosylation factor-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.3413 2 535.334424 1068.6543 83749.44 0.56447 0.00030218 -0.18716 -0.00010019 0.37731 0.00020199 535.334346867288 539.341370011435 100.89 1.457 100.89 99.896 101.35 0 341 116 5 0 0 0 0.0026948 1 63689 61.161 32.012 1 2.5988 2.6625 0 17577000 4929900 12647000 17180 1262 6486 6637 26888 26888 ILILQGLK 8 1 0 Unmodified _ILILQGLK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.3174 2 449.310221 896.605889 90096.52 0.48115 0.00021618 -0.35766 -0.0001607 0.12348 5.5482E-05 449.309886054011 453.317105598003 95.857 1.1376 95.857 95.321 96.459 0 435 96 6 0 0 0 0.014565 1 58216 62.714 27.514 1 0.93649 1.0558 0 129280000 65993000 63287000 17181 1827 6487 6638 26889 26889 ILILQGLK 8 1 0 Unmodified _ILILQGLK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.3101 2 449.310221 896.605889 89404.2 0.18332 8.2369E-05 -0.078234 -3.5151E-05 0.10509 4.7217E-05 449.310061543302 453.317180327463 94.892 1.256 94.892 94.25 95.506 0 488 106 6 0 0 0 0.0088507 3 58771 76.847 43.035 1 0.94549 1.0583 0 83772000 44706000 39065000 17182 1827 6487 6638 26890;26891;26892 26890 ILILQGLK 8 1 0 Unmodified _ILILQGLK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 449.3101 2 449.310221 896.605889 90053.3 0.12576 5.6506E-05 0.020121 9.0406E-06 0.14588 6.5547E-05 449.310117845901 453.317188735099 108.7 1.1257 108.7 108.31 109.43 0 209 53 6 0 0 0 0.058709 1 61455 40.573 17.553 1 1.3491 1.0795 0 21490000 8907300 12583000 17183 1827 6487 6638 26893 26893 ILISLRPQELVDVIK 15 1 1 Unmodified _ILISLRPQELVDVIK_ 0 0 1 Q59ES2;Q14573 Q59ES2 Q59ES2 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3615 3 579.360862 1735.06076 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.71 1 118.71 118.21 119.21 0 0 0 0 0.022904 1 78132 40.025 1.6589 1 17184 1735 6488 6639 26894 26894 ILITTSDRPHGR 12 0 2 Unmodified _ILITTSDRPHGR_ 0 0 1 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 341.9501 4 342.195388 1364.75245 104167.1 0.042856 1.4665E-05 0.13974 4.7818E-05 0.18259 6.2483E-05 342.195390879396 347.199457419689 25.941 0.32233 25.941 25.793 26.115 -1.9073E-06 57 15 7 0 0 0 0.049068 1 11458 15.031 11.903 1 0.97747 1.0823 0 10887000 5211700 5675400 17185 2048 6489 6640 26895 26895 ILITTSDRPHGR 12 0 2 Unmodified _ILITTSDRPHGR_ 0 0 1 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.9247 3 455.924759 1364.75245 88972.37 0.032878 1.499E-05 -0.30276 -0.00013804 -0.26988 -0.00012305 455.924695293769 462.596872989944 24.927 0.24837 24.927 24.835 25.084 1.9073E-06 39 9 7 0 0 0 8.4671E-05 2 10608 61.435 55.593 1 1.0427 1.1513 0 22150000 10807000 11343000 17186 2048 6489 6640 26896;26897 26896 ILITTVPPNLR 11 0 1 Unmodified _ILITTVPPNLR_ 0 0 0 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8881 2 618.887355 1235.76016 80508.7 0.64259 0.00039769 0.27567 0.00017061 0.91826 0.0005683 618.887438512725 623.891504180867 110.1 0.93742 110.1 109.68 110.62 0 106 49 4 0 0 0 0.029206 2 63503 39.305 27.855 1 0.97685 0.85967 0 1645800 595970 1049800 17187 1049 6490 6641 26898;26899 26898 ILLAELEQLK 10 1 0 Unmodified _ILLAELEQLK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.3611 2 585.360639 1168.70673 79325.96 0.8157 0.00047748 0.32783 0.0001919 1.1435 0.00066938 585.360817182636 589.367846546364 110.14 1.1404 110.14 109.84 110.98 0 467 78 9 0 0 0 1.0257E-11 5 68947 138.4 75.849 1 1.3493 1.5923 0 357940000 149350000 208590000 17188 1457 6491 6642 26900;26901;26902;26903;26904 26901 ILLAELEQLK 10 1 0 Unmodified _ILLAELEQLK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1177.7261 1 1169.714 1168.70673 56267.79 0.14275 0.00016698 0.75409 0.00088207 0.89684 0.001049 1169.71464947031 1177.72881567061 110.18 0.42432 110.18 109.94 110.36 0 63 27 4 0 0 0 0.0022165 1 69037 76.827 54.087 1 1.33 1.3586 0 10473000 4470800 6002200 17189 1457 6491 6642 26905 26905 ILLAELEQLK 10 1 0 Unmodified _ILLAELEQLK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.3679 2 585.360639 1168.70673 79402.1 0.66421 0.0003888 0.080835 4.7317E-05 0.74504 0.00043612 585.360698359194 589.367733233727 109.46 1.3388 109.46 109.01 110.35 0 517 89 9 0 0 0 3.7597E-08 4 70129 118.33 59.519 1 1.3265 1.5465 0 257220000 108090000 149130000 17190 1457 6491 6642 26906;26907;26908;26909 26907 ILLAELEQLK 10 1 0 Unmodified _ILLAELEQLK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1177.7297 1 1169.714 1168.70673 55321.55 -0.00075604 -8.8435E-07 0.69411 0.00081191 0.69335 0.00081103 1169.71378007368 1177.72867749741 109.5 0.45916 109.5 109.32 109.78 0 71 30 4 0 0 0 0.007783 1 70351 63.216 42.516 1 1.3496 1.3764 0 12114000 5424100 6689700 17191 1457 6491 6642 26910 26910 ILLAELEQLK 10 1 0 Unmodified _ILLAELEQLK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.368 2 585.360639 1168.70673 80947.23 0.77977 0.00045645 0.16413 9.6077E-05 0.94391 0.00055253 585.360736637824 589.367708146344 121.46 1.5989 121.46 121.19 122.79 0 327 78 8 0 0 0 8.1742E-06 3 72217 106.6 64.001 1 3.8619 3.1987 0 44557000 9252800 35304000 17192 1457 6491 6642 26911;26912;26913 26911 ILLAELEQLK 10 1 0 Unmodified _ILLAELEQLK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.368 2 585.360639 1168.70673 79134.11 0.72013 0.00042153 0.15168 8.879E-05 0.87181 0.00051032 585.360739870899 589.367673650911 121.28 1.0016 121.28 121.01 122.01 0 243 49 7 0 0 0 0.00041053 2 71133 87.308 47.306 1 3.691 3.0819 0 42720000 9371700 33349000 17193 1457 6491 6642 26914;26915 26914 ILLAEVPTMAVEK 13 1 0 Oxidation (M) _ILLAEVPTM(ox)AVEK_ ILLAEVPTM(1)AVEK ILLAEVPTM(41.69)AVEK 0 1 0 Q96HT3;O15160;D6RDJ3;H0Y723;B4DEC2;E7EQB9 Q96HT3 Q96HT3 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.4094 2 715.402178 1428.7898 74065.31 0.99814 0.00071407 -0.20787 -0.00014871 0.79027 0.00056536 715.401608555094 719.409128836187 93.333 0.54081 93.333 93.006 93.546 0 92 44 4 0 0 0 0.0050527 1 56559 41.689 22.909 1 1.9866 2.07 0 11664000 5386200 6277900 17194 1376 6492 6643 26916 26916 1039 ILLDPNSEEVSEK 13 1 0 Unmodified _ILLDPNSEEVSEK_ 0 0 0 P51531;A0A0U1RQZ9;F6VDE0;B4DK35 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.8799 2 736.877578 1471.7406 71375.85 0.69378 0.00051123 1.268 0.00093433 1.9617 0.0014456 736.878599920445 740.884690197439 69.292 0.70074 69.292 68.895 69.595 0 154 40 6 0 0 0 0.00036656 2 40225 62.408 36.469 1 0.882 0.911 0 17240000 8895700 8344000 17195 1595 6493 6644 26917;26918 26918 ILLDPNSEEVSEK 13 1 0 Unmodified _ILLDPNSEEVSEK_ 0 0 0 P51531;A0A0U1RQZ9;F6VDE0;B4DK35 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.8795 2 736.877578 1471.7406 71329.55 0.61818 0.00045552 0.31397 0.00023135 0.93215 0.00068688 736.878296843501 740.884692985911 79.177 0.71053 79.177 78.9 79.611 -7.6294E-06 144 42 6 0 0 0 0.021582 2 42597 35.414 14.913 1 1.9289 1.5386 0 2933000 1099800 1833200 17196 1595 6493 6644 26919;26920 26920 ILLDPNSEEVSEK 13 1 0 Unmodified _ILLDPNSEEVSEK_ 0 0 0 P51531;A0A0U1RQZ9;F6VDE0;B4DK35 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 736.8802 2 736.877578 1471.7406 70613.66 0.57387 0.00042287 0.2146 0.00015814 0.78847 0.00058101 736.878112966359 740.884668229697 79.476 0.56811 79.476 79.208 79.776 0 129 34 6 0 0 0 0.02401 3 41932 34.887 16.002 1 2.0555 1.649 0 2465200 913940 1551300 17197 1595 6493 6644 26921;26922;26923 26922 ILLDSGLEK 9 1 0 Unmodified _ILLDSGLEK_ 0 0 0 Q15058 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.297 2 494.289682 986.564812 NaN NaN NaN 0.19273 9.5263E-05 NaN NaN NaN NaN 69.143 0.3429 69.143 68.996 69.339 0 0 0 0 0.010039 1 41147 66.692 22.884 1 NaN NaN 0 4122500 0 4122500 17198 1751 6494 6645 26924 26924 ILLELLNQMDGFDQNVNVK 19 1 0 Oxidation (M) _ILLELLNQM(ox)DGFDQNVNVK_ ILLELLNQM(1)DGFDQNVNVK ILLELLNQM(45.28)DGFDQNVNVK 0 1 0 A8K2M0;P43686 A8K2M0 A8K2M0 PSMC4 26S protease regulatory subunit 6B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1114.0781 2 1110.07246 2218.13037 NaN NaN NaN -0.90871 -0.0010087 NaN NaN NaN NaN 119.2 0.41356 119.2 119 119.41 7.6294E-06 0 0 0 0.0010182 1 76653 45.28 30.079 1 NaN NaN 0 2634800 0 2634800 17199 710 6495 6646 26925 26925 546 ILLGSEQGSLQLWNVK 16 1 0 Unmodified _ILLGSEQGSLQLWNVK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.5012 2 892.998894 1783.98323 NaN NaN NaN 0.056333 5.0305E-05 NaN NaN NaN NaN 114.98 0.77747 114.98 114.71 115.49 0 0 0 0 2.7753E-35 1 73015 146.16 120.78 1 NaN NaN 0 41065000 41065000 0 17200 486 6496 6647 26926 26926 ILLGSEQGSLQLWNVK 16 1 0 Unmodified _ILLGSEQGSLQLWNVK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.0063 2 892.998894 1783.98323 NaN NaN NaN -1.1205 -0.0010006 NaN NaN NaN NaN 114.98 0.79243 114.98 114.72 115.52 0 0 0 0 3.5212E-18 1 73032 119.39 96.469 1 NaN NaN 0 31491000 0 31491000 17201 486 6496 6647 26927 26927 ILLGSEQGSLQLWNVK 16 1 0 Unmodified _ILLGSEQGSLQLWNVK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.9991 2 892.998894 1783.98323 65223.77 0.70334 0.00062808 -0.2345 -0.00020941 0.46883 0.00041867 892.998847788676 897.005426238463 114.45 0.56813 114.45 114.19 114.76 0 212 37 8 0 0 0 1.3631E-08 2 74375 104.94 104.94 1 0.82488 0.93067 0 63659000 34195000 29464000 17202 486 6496 6647 26928;26929 26929 ILLGSEQGSLQLWNVK 16 1 0 Unmodified _ILLGSEQGSLQLWNVK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 893.0003 2 892.998894 1783.98323 65228.86 0.7518 0.00067135 -0.011521 -1.0289E-05 0.74027 0.00066106 892.999231837553 897.005808946276 126.37 0.84027 126.37 126.1 126.94 0 191 30 10 0 0 0 0.00012272 3 75982 77.593 77.593 1 1.3758 1.096 0 19712000 8350400 11362000 17203 486 6496 6647 26930;26931;26932 26931 ILLGSEQGSLQLWNVK 16 1 0 Unmodified _ILLGSEQGSLQLWNVK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 897.5079 2 892.998894 1783.98323 65052.17 0.30221 0.00026987 0.26525 0.00023687 0.56746 0.00050674 893.500727705601 897.00607592163 126.24 0.86118 126.24 125.99 126.85 0 221 37 11 0 0 0 1.7701E-08 2 74891 102.62 102.62 1 1.2332 1.0179 0 30850000 13201000 17650000 17204 486 6496 6647 26933;26934 26933 ILLITEDLK 9 1 0 Unmodified _ILLITEDLK_ 0 0 0 Q6FGM6;E5KN59;E5KN55;Q08752 Q6FGM6 Q6FGM6 PPID Peptidyl-prolyl cis-trans isomerase D ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.3369 2 529.328808 1056.64306 NaN NaN NaN -0.56437 -0.00029874 NaN NaN NaN NaN 99.329 0.72215 99.329 99.206 99.928 0 0 0 0 0.014137 1 62614 63.48 8.9303 1 NaN NaN 0 10236000 0 10236000 17205 1206 6497 6648 26935 26935 ILLNCPYCTFNADK 14 1 0 Unmodified _ILLNCPYCTFNADK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.4097 2 864.907833 1727.80111 70020.71 0.6152 0.00053209 0.10953 9.4729E-05 0.72472 0.00062682 865.409147328096 868.915129420723 89.911 0.41537 89.911 89.608 90.023 7.6294E-06 81 33 4 0 0 0 3.9792E-06 2 54169 100.93 76.549 1 0.59524 0.61643 0 17108000 11066000 6042200 17206 878 6498 6649 26936;26937 26936 ILLNCPYCTFNADK 14 1 0 Unmodified _ILLNCPYCTFNADK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.4108 2 864.907833 1727.80111 NaN NaN NaN 0.1295 0.00011201 NaN NaN NaN NaN 88.764 0.43152 88.764 88.602 89.034 0 0 0 0 0.00015817 1 54792 86.911 72.22 1 NaN NaN 0 10512000 10512000 0 17207 878 6498 6649 26938 26938 ILLNCPYCTFNADK 14 1 0 Unmodified _ILLNCPYCTFNADK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.916 2 864.907833 1727.80111 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.816 1 88.816 88.316 89.316 0 0 0 0 0.0017963 1 54793 69.451 52.425 1 17208 878 6498 6649 26939 26939 ILLNCPYCTFNADK 14 1 0 Unmodified _ILLNCPYCTFNADK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 868.9154 2 864.907833 1727.80111 66912.48 0.42132 0.0003644 0.16859 0.00014582 0.58991 0.00051022 864.907709891764 868.915315763304 102.76 0.48386 102.76 102.43 102.92 0 90 32 5 0 0 0 0.0093378 4 58291 37.18 27.747 1 1.7468 1.3714 0 3156500 1455100 1701400 17209 878 6498 6649 26940;26941;26942;26943 26941 ILLNCPYCTFNADK 14 1 0 Unmodified _ILLNCPYCTFNADK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 868.9167 2 864.907833 1727.80111 65662.24 0.20799 0.00017989 0.074856 6.4744E-05 0.28285 0.00024464 865.409588093729 868.915396185849 102.57 0.47246 102.57 102.32 102.8 0 106 31 5 0 0 0 0.0078906 2 57351 39.625 32.737 1 1.3171 1.0564 0 3041200 1355800 1685300 17210 878 6498 6649 26944;26945 26945 ILLQHICAK 9 1 0 Unmodified _ILLQHICAK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 365.883 3 365.882955 1094.62703 98868.15 0.49631 0.00018159 -0.70774 -0.00025895 -0.21143 -7.7359E-05 365.882619463722 368.554149025591 43.688 0.30831 43.688 43.494 43.802 0 87 23 6 0 0 0 0.0059725 1 23764 51.193 44.524 1 0.76561 0.80519 0 19714000 11316000 8397600 17211 1565 6499 6650 26946 26946 ILLTEPPMNPTK 12 1 0 Oxidation (M) _ILLTEPPM(ox)NPTK_ ILLTEPPM(1)NPTK ILLTEPPM(43.49)NPTK 0 1 0 B4DHK9;P61160;B4DWQ5;Q8IY98;F5H6T1 B4DHK9 B4DHK9 ACTR2 Actin-related protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.3812 2 685.37342 1368.73229 NaN NaN NaN -1.0621 -0.0007279 NaN NaN NaN NaN 67.645 0.66255 67.645 67.352 68.014 0 0 0 0 0.012789 2 39182 43.492 14.766 1 NaN NaN 0 9140500 0 9140500 17212 976 6500 6651 26947;26948 26948 781 ILLTEPPMNPTK 12 1 0 Oxidation (M) _ILLTEPPM(ox)NPTK_ ILLTEPPM(1)NPTK ILLTEPPM(60.34)NPTK 0 1 0 B4DHK9;P61160;B4DWQ5;Q8IY98;F5H6T1 B4DHK9 B4DHK9 ACTR2 Actin-related protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3811 2 685.37342 1368.73229 NaN NaN NaN -0.83305 -0.00057095 NaN NaN NaN NaN 66.362 0.30071 66.362 66.185 66.486 0 0 0 0 0.0020037 1 39211 60.342 14.214 1 NaN NaN 0 5623300 0 5623300 17213 976 6500 6651 26949 26949 781 ILLTLVANPYSYTDK 15 1 0 Unmodified _ILLTLVANPYSYTDK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 859.9764 2 855.969271 1709.92399 NaN NaN NaN -0.50964 -0.00043623 NaN NaN NaN NaN 116.5 0.44388 116.5 116.29 116.74 0 0 0 0 2.5791E-10 2 74327 108.37 90.936 1 NaN NaN 0 12155000 0 12155000 17214 1392 6501 6652 26950;26951 26950 ILLTLVANPYSYTDK 15 1 0 Unmodified _ILLTLVANPYSYTDK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.9772 2 855.969271 1709.92399 67526.83 1.0966 0.00093867 -0.061881 -5.2968E-05 1.0347 0.00088571 855.96916427441 859.976780850346 128.13 0.572 128.13 127.95 128.53 0 72 23 5 0 0 0 0.0044568 1 77356 39.179 39.179 1 1.2059 0.95462 0 4984600 2175600 2809000 17215 1392 6501 6652 26952 26952 ILLTLVANPYSYTDK 15 1 0 Unmodified _ILLTLVANPYSYTDK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 859.976 2 855.969271 1709.92399 67456.13 0.80288 0.00068724 0.23018 0.00019703 1.0331 0.00088427 855.969852544372 859.976831980557 127.94 0.59151 127.94 127.71 128.3 0 72 24 6 0 0 0 0.024922 1 76266 29.341 29.341 1 1.2235 0.99805 0 5983700 1935100 4048500 17216 1392 6501 6652 26953 26953 ILLTQENPFFR 11 0 1 Unmodified _ILLTQENPFFR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.381 2 689.379894 1376.74524 74364.4 0.88705 0.00061152 0.069848 4.8151E-05 0.9569 0.00065967 689.379774839897 694.383834239742 110.96 0.67625 110.96 110.74 111.42 -7.6294E-06 201 45 7 0 0 0 6.3604E-41 2 69702 194.9 194.9 1 1.3267 1.4769 0 79303000 35057000 44246000 17217 1694 6502 6653 26954;26955 26954 ILLTQENPFFR 11 0 1 Unmodified _ILLTQENPFFR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3817 2 689.379894 1376.74524 73535.94 0.60431 0.0004166 0.30643 0.00021125 0.91074 0.00062785 689.379885597142 694.38409287121 110.32 0.70624 110.32 110.06 110.76 -7.6294E-06 242 48 8 0 0 0 4.6364E-31 2 70908 182.98 182.98 1 1.3294 1.5149 0 102530000 44303000 58224000 17218 1694 6502 6653 26956;26957 26956 ILLTQENPFFR 11 0 1 Unmodified _ILLTQENPFFR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.3837 2 689.379894 1376.74524 73503.39 0.73696 0.00050805 -0.0088773 -6.1198E-06 0.72809 0.00050193 689.379824230076 694.383422079315 122.08 0.57938 122.08 121.83 122.4 0 126 28 7 0 0 0 0.00012356 3 72718 116.37 116.37 1 0.77519 0.64144 0 11281000 6204500 5076900 17219 1694 6502 6653 26958;26959;26960 26958 ILLTQENPFFR 11 0 1 Unmodified _ILLTQENPFFR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3805 2 689.379894 1376.74524 74642.94 0.81213 0.00055986 0.10578 7.2923E-05 0.91791 0.00063279 689.379805886504 694.383497052937 121.85 0.53322 121.85 121.61 122.14 0 143 25 8 0 0 0 0.00044841 2 71750 78.934 78.934 1 0.8164 0.66136 0 10377000 5264100 5113000 17220 1694 6502 6653 26961;26962 26962 ILMEHIHK 8 1 0 Oxidation (M) _ILM(ox)EHIHK_ ILM(1)EHIHK ILM(125.25)EHIHK 0 1 0 J3QR09;J3KTE4;Q53G49;P84098;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.7922 2 518.784044 1035.55354 82144.19 0.44457 0.00023064 0.51621 0.0002678 0.96078 0.00049844 518.784095045199 522.791324990419 19.691 0.31494 19.691 19.58 19.894 0 94 19 6 0 0 0 0.00045847 1 6196 125.25 75.126 1 1.0585 1.1373 0 39146000 17440000 21706000 17221 1331 6503 6654 26963 26963 1006 ILMEHIHK 8 1 0 Oxidation (M) _ILM(ox)EHIHK_ ILM(1)EHIHK ILM(54.78)EHIHK 0 1 0 J3QR09;J3KTE4;Q53G49;P84098;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 346.1918 3 346.191788 1035.55354 100473.2 -0.025978 -8.9934E-06 0.030712 1.0632E-05 0.004734 1.6389E-06 346.191816954561 348.863111672163 18.544 0.59544 18.544 18.285 18.881 0 100 30 6 0 0 0 0.0066123 2 5213 54.776 27.646 1 1.1743 1.3041 0 49518000 24121000 25397000 17222 1331 6503 6654 26964;26965 26964 1006 ILMEHIHK 8 1 0 Oxidation (M) _ILM(ox)EHIHK_ ILM(1)EHIHK ILM(139.31)EHIHK 0 1 0 J3QR09;J3KTE4;Q53G49;P84098;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.7839 2 518.784044 1035.55354 85266.84 0.37604 0.00019508 -0.1818 -9.4315E-05 0.19424 0.00010077 518.783915495563 522.790937187651 18.543 0.44903 18.543 18.39 18.839 0 83 23 6 0 0 0 1.2489E-05 2 5215 139.31 67.175 1 1.0643 1.1889 0 52978000 21766000 31212000 17223 1331 6503 6654 26966;26967 26966 1006 ILMEHIHK 8 1 0 Oxidation (M) _ILM(ox)EHIHK_ ILM(1)EHIHK ILM(100.39)EHIHK 0 1 0 J3QR09;J3KTE4;Q53G49;P84098;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.7841 2 518.784044 1035.55354 81200.51 -0.17659 -9.1614E-05 0.52773 0.00027378 0.35113 0.00018216 518.784261671371 522.79146730297 19.916 0.4038 19.916 19.798 20.202 -1.9073E-06 96 20 7 0 0 0 0.0011476 1 5467 100.39 51.603 1 0.52713 0.42158 0 7074800 4603300 2471500 17224 1331 6503 6654 26968 26968 1006 ILMEHIHK 8 1 0 Oxidation (M) _ILM(ox)EHIHK_ ILM(1)EHIHK ILM(67.98)EHIHK 0 1 0 J3QR09;J3KTE4;Q53G49;P84098;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.7841 2 518.784044 1035.55354 83367.36 -0.18036 -9.3569E-05 0.35722 0.00018532 0.17686 9.1751E-05 518.78430117641 522.791201845369 19.642 0.51152 19.642 19.426 19.937 0 120 30 7 0 0 0 0.0059502 2 4773 67.981 40.844 1 0.53416 0.43554 0 6516400 4169600 2346800 17225 1331 6503 6654 26969;26970 26969 1006 ILMEHIHK 8 1 0 Unmodified _ILMEHIHK_ 0 0 0 J3QR09;J3KTE4;Q53G49;P84098;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.7938 2 510.786587 1019.55862 83888.77 0.074036 3.7817E-05 -0.11657 -5.9543E-05 -0.042535 -2.1726E-05 510.786337206137 514.793619242678 27.64 0.53953 27.64 27.48 28.019 -1.9073E-06 81 23 7 0 0 0 0.0022722 2 10308 101.28 56.889 1 1.1339 0.92719 0 4779600 2243300 2536300 17226 1331 6503 6655 26971;26972 26971 ILMHTFPK 8 1 0 Oxidation (M) _ILM(ox)HTFPK_ ILM(1)HTFPK ILM(41.03)HTFPK 0 1 0 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 337.5242 3 334.852884 1001.53682 108021.2 0.16192 5.4221E-05 0.063265 2.1185E-05 0.22519 7.5405E-05 334.852736000536 337.524334835347 30.789 0.45048 30.789 30.565 31.016 0 110 38 4 0 0 0 0.014556 1 15173 41.029 31.815 1 1.6844 1.721 0 17300000 6512300 10788000 17227 780 6504 6656 26973 26973 608 ILMTYSVQDHMETR 14 0 1 2 Oxidation (M) _ILM(ox)TYSVQDHM(ox)ETR_ ILM(1)TYSVQDHM(1)ETR ILM(53.3)TYSVQDHM(53.3)ETR 0 2 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.2756 3 585.939528 1754.79676 NaN NaN NaN -0.22151 -0.00012979 NaN NaN NaN NaN 37.873 0.54053 37.873 37.659 38.199 0 0 0 0 0.001405 2 19271 53.3 44.916 1 NaN NaN 0 27346000 0 27346000 17228 2103 6505 6657 26974;26975 26974 1927;1928 ILMTYSVQDHMETR 14 0 1 2 Oxidation (M) _ILM(ox)TYSVQDHM(ox)ETR_ ILM(1)TYSVQDHM(1)ETR ILM(51.84)TYSVQDHM(51.84)ETR 0 2 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.4095 2 878.405654 1754.79676 NaN NaN NaN -1.0462 -0.00091894 NaN NaN NaN NaN 37.855 0.18019 37.855 37.728 37.908 0 0 0 0 0.0019604 1 19304 51.841 36.869 1 NaN NaN 0 9495100 0 9495100 17229 2103 6505 6657 26976 26976 1927;1928 ILMTYSVQDHMETR 14 0 1 2 Oxidation (M) _ILM(ox)TYSVQDHM(ox)ETR_ ILM(1)TYSVQDHM(1)ETR ILM(74.85)TYSVQDHM(74.85)ETR 0 2 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.2761 3 585.939528 1754.79676 NaN NaN NaN -0.33104 -0.00019397 NaN NaN NaN NaN 36.819 0.64186 36.819 36.461 37.102 0 0 0 0 0.00016903 1 18837 74.853 54.747 1 NaN NaN 0 35230000 0 35230000 17230 2103 6505 6657 26977 26977 1927;1928 ILMVGLDAAGK 11 1 0 Oxidation (M) _ILM(ox)VGLDAAGK_ ILM(1)VGLDAAGK ILM(71.35)VGLDAAGK 0 1 0 C9J1Z8;A4D0Z3;B4DLJ3;P84085;B4DEB9;F5H0C7;B4DJC8;F5H1V1;F5H6T5;F8WDB3;B4DN70;P18085;C9JPM4;A0A024R3Q3;A0A024R0Y6;F5H423;P84077;P61204;B4E190 C9J1Z8;P18085;A0A024R3Q3 P18085 ARF5;ARF3;ARF4;ARF1 ADP-ribosylation factor 5;ADP-ribosylation factor 4;ADP-ribosylation factor 1;ADP-ribosylation factor 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.3167 2 552.310092 1102.60563 NaN NaN NaN -0.40095 -0.00022145 NaN NaN NaN NaN 72.594 0.62513 72.594 72.483 73.109 0 0 0 0 0.00086429 2 42476 71.349 34.328 1 NaN NaN 0 31663000 0 31663000 17231 1498;660;62 6506 6658 26978;26979 26978 34 ILMVGLDAAGK 11 1 0 Oxidation (M) _ILM(ox)VGLDAAGK_ ILM(1)VGLDAAGK ILM(70.06)VGLDAAGK 0 1 0 C9J1Z8;A4D0Z3;B4DLJ3;P84085;B4DEB9;F5H0C7;B4DJC8;F5H1V1;F5H6T5;F8WDB3;B4DN70;P18085;C9JPM4;A0A024R3Q3;A0A024R0Y6;F5H423;P84077;P61204;B4E190 C9J1Z8;P18085;A0A024R3Q3 P18085 ARF5;ARF3;ARF4;ARF1 ADP-ribosylation factor 5;ADP-ribosylation factor 4;ADP-ribosylation factor 1;ADP-ribosylation factor 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.3137 2 552.310092 1102.60563 NaN NaN NaN -2.005 -0.0011074 NaN NaN NaN NaN 71.279 0.8184 71.279 71.004 71.822 0 0 0 0 0.00090608 1 42662 70.056 33.036 1 NaN NaN 0 26553000 0 26553000 17232 1498;660;62 6506 6658 26980 26980 34 ILNDDTALK 9 1 0 Unmodified _ILNDDTALK_ 0 0 0 P54727;B4DEA3;Q53F10;B7Z4W4;Q5W0S5;B7ZA74;Q5W0S4 P54727 P54727 RAD23B UV excision repair protein RAD23 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.7841 2 501.776939 1001.53933 87124.24 0.17739 8.9011E-05 0.035957 1.8042E-05 0.21335 0.00010705 501.776920588712 505.78399239324 50.578 1.1127 50.578 50.165 51.277 0 348 80 7 0 0 0 0.0083546 2 24704 69.825 12.544 1 1.1545 0.92057 0 9578700 4647800 4930900 17233 1610 6507 6659 26981;26982 26981 ILNDDTALK 9 1 0 Unmodified _ILNDDTALK_ 0 0 0 P54727;B4DEA3;Q53F10;B7Z4W4;Q5W0S5;B7ZA74;Q5W0S4 P54727 P54727 RAD23B UV excision repair protein RAD23 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.7769 2 501.776939 1001.53933 86247.59 -0.041367 -2.0757E-05 0.17736 8.8996E-05 0.13599 6.8239E-05 501.776991707881 505.784045511684 50.868 1.0658 50.868 50.477 51.543 0 318 73 6 0 0 0 0.0091127 2 24329 61.679 18.81 1 1.1475 0.94014 0 8681700 4206000 4475600 17234 1610 6507 6659 26983;26984 26984 ILNDLSSDAPGVPR 14 0 1 Unmodified _ILNDLSSDAPGVPR_ 0 0 0 Q53X93;Q5U0J5;P16220;C9J4L5;B7Z7P1;C9JBT4;H7C3I0;E7EWP8;B7Z5C6;C9J896;Q4ZG78 Q53X93 Q53X93 CREB1 Cyclic AMP-responsive element-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.39 2 727.385905 1452.75726 68531.29 0.8641 0.00062854 -0.20952 -0.0001524 0.65458 0.00047613 727.384948690638 732.389879519431 91.289 0.63496 91.289 91.014 91.649 7.6294E-06 203 43 7 0 0 0 0.00013888 1 50611 78.653 78.653 1 1.2067 1.0329 0 5984700 2945500 3039200 17235 1488 6508 6660 26985 26985 ILNDVQDR 8 0 1 Unmodified _ILNDVQDR_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;B4DP52;H0Y400;O00148;B4DX78;Q69YT6 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7593 2 486.759081 971.503609 89192.93 0.49928 0.00024303 0.019466 9.4753E-06 0.51874 0.0002525 486.759204200302 491.763040454423 28.683 0.47063 28.683 28.513 28.983 1.9073E-06 83 25 5 0 0 0 0.010755 1 13610 71.501 56.062 1 1.2841 1.3984 0 51154000 26191000 24964000 17236 1359;362 6509 6661 26986 26986 ILNFLMHPK 9 1 0 Oxidation (M) _ILNFLM(ox)HPK_ ILNFLM(1)HPK ILNFLM(44.72)HPK 0 1 0 P35659;B4DFG0;D6RDA2;H0Y8X0 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 376.8791 3 376.879322 1127.61614 96483.88 0.064382 2.4264E-05 -0.12412 -4.6779E-05 -0.059742 -2.2515E-05 376.879201287857 379.550641468866 69.205 1.149 69.205 68.657 69.806 0 478 98 6 0 0 0 0.0084338 1 40059 44.719 44.719 1 0.79061 0.88914 0 71223000 41633000 29590000 17237 1546 6510 6662 26987 26987 1303 ILNFLMHPK 9 1 0 Oxidation (M) _ILNFLM(ox)HPK_ ILNFLM(1)HPK ILNFLM(100.19)HPK 0 1 0 P35659;B4DFG0;D6RDA2;H0Y8X0 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8159 2 564.815344 1127.61614 81126.44 0.62025 0.00035033 0.056171 3.1726E-05 0.67642 0.00038205 564.815234953967 568.822463036714 69.254 0.94257 69.254 68.812 69.755 0 262 80 5 0 0 0 0.00018266 1 40204 100.19 100.19 1 0.84403 0.82689 0 21615000 11656000 9958900 17238 1546 6510 6662 26988 26988 1303 ILNFLMHPK 9 1 0 Oxidation (M) _ILNFLM(ox)HPK_ ILNFLM(1)HPK ILNFLM(89.55)HPK 0 1 0 P35659;B4DFG0;D6RDA2;H0Y8X0 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.317 2 564.815344 1127.61614 80286.7 0.54612 0.00030846 0.033612 1.8985E-05 0.57973 0.00032744 564.815306165126 568.822279677829 66.787 0.94737 66.787 66.453 67.4 0 268 79 4 0 0 0 0.00054805 3 39687 89.55 89.55 1 0.65956 0.66538 0 28234000 17542000 10692000 17239 1546 6510 6662 26989;26990;26991 26991 1303 ILNFLMHPK 9 1 0 Oxidation (M) _ILNFLM(ox)HPK_ ILNFLM(1)HPK ILNFLM(47.2)HPK 0 1 0 P35659;B4DFG0;D6RDA2;H0Y8X0 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.5506 3 376.879322 1127.61614 97117.84 0.084606 3.1886E-05 -0.32317 -0.00012179 -0.23856 -8.9908E-05 376.879118492144 379.550538838783 66.833 1.3378 66.833 66.354 67.692 0 528 111 7 0 0 0 0.0068645 1 39354 47.198 47.198 1 0.78341 0.88197 0 70133000 37723000 32410000 17240 1546 6510 6662 26992 26992 1303 ILNHFDVQLPESMEDDGLSER 21 0 1 Oxidation (M) _ILNHFDVQLPESM(ox)EDDGLSER_ ILNHFDVQLPESM(1)EDDGLSER ILNHFDVQLPESM(42.9)EDDGLSER 0 1 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.0516 3 820.716433 2459.12747 68187.08 0.94267 0.00077367 -0.48899 -0.00040132 0.45369 0.00037235 821.050592897397 824.386747922647 94.021 0.71335 94.021 93.686 94.4 7.6294E-06 343 61 9 0 0 0 1.4746E-05 1 58372 42.904 42.904 1 1.7856 2.0351 0 49666000 18739000 30927000 17241 1412 6511 6663 26993 26993 1104 ILNHSVDK 8 1 0 Unmodified _ILNHSVDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 309.1748 3 309.174903 924.50288 109286.9 -0.086848 -2.6851E-05 -0.020949 -6.477E-06 -0.1078 -3.3328E-05 309.174894052579 311.84613298755 17.464 0.66703 17.464 17.047 17.714 0 67 22 6 0 0 0 0.041055 1 4637 23.354 0 1 0.76755 0.75625 0 24424000 14028000 10396000 17242 515 6512 6664 26994 26994 ILNHSVDK 8 1 0 Unmodified _ILNHSVDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.2657 2 463.258717 924.50288 90289.99 0.1451 6.7221E-05 -0.67068 -0.0003107 -0.52558 -0.00024348 463.258356783235 467.265369803802 17.462 0.33887 17.462 17.344 17.683 1.9073E-06 52 13 6 0 0 0 0.009998 1 4652 73.248 0 1 0.8451 0.88105 0 29805000 15072000 14733000 17243 515 6512 6664 26995 26995 ILNHSVDK 8 1 0 Unmodified _ILNHSVDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2586 2 463.258717 924.50288 88581.38 -0.070328 -3.258E-05 -0.14555 -6.7428E-05 -0.21588 -0.00010001 463.258634418539 467.265604359649 17.307 0.47161 17.307 17.132 17.604 0 51 15 7 0 0 0 0.001623 2 4299 107.29 0 1 0.75815 0.79825 0 35149000 19087000 16063000 17244 515 6512 6664 26996;26997 26996 ILNIFGVIK 9 1 0 Unmodified _ILNIFGVIK_ 0 0 0 A8K6Q8;P02786;G3V0E5;B7Z2I6 A8K6Q8 A8K6Q8 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.8283 2 508.828778 1015.643 88003.48 0.72523 0.00036902 -0.12996 -6.6126E-05 0.59528 0.00030289 508.82862579767 512.835805510727 119.55 0.44559 119.55 119.28 119.72 -7.6294E-06 81 29 4 0 0 0 0.0027201 2 76846 73.616 58.235 1 0.87897 0.91717 0 3991300 2043700 1947700 17245 761 6513 6665 26998;26999 26999 ILNLLSPSDGER 12 0 1 Unmodified _ILNLLSPSDGER_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.358 2 657.356616 1312.69868 75020.22 0.3375 0.00022186 0.43789 0.00028785 0.77539 0.00050971 657.357090329144 662.360953137286 89.336 0.46275 89.336 89.164 89.626 0 97 41 4 0 0 0 9.1081E-06 2 53940 108.47 81.581 1 0.9621 0.96537 0 16113000 8239400 7873500 17246 2150 6514 6666 27000;27001 27001 ILNLLSPSDGER 12 0 1 Unmodified _ILNLLSPSDGER_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.3617 2 657.356616 1312.69868 NaN NaN NaN 0.0071896 4.7262E-06 NaN NaN NaN NaN 88.142 0.40389 88.142 88.046 88.45 0 0 0 0 5.2668E-13 1 54428 118.4 73.423 1 NaN NaN 0 11853000 0 11853000 17247 2150 6514 6666 27002 27002 ILNLLSPSDGER 12 0 1 Unmodified _ILNLLSPSDGER_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.3591 2 657.356616 1312.69868 75589.31 0.57068 0.00037514 0.5769 0.00037923 1.1476 0.00075437 657.35731504519 662.361111905784 101.89 0.28793 101.89 101.76 102.04 0 58 19 4 0 0 0 0.0063345 1 57784 49.3 41.076 1 1.9654 1.6451 0 3929500 1162800 2766600 17248 2150 6514 6666 27003 27003 ILNLLSPSDGER 12 0 1 Unmodified _ILNLLSPSDGER_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.8617 2 657.356616 1312.69868 75368.55 0.51386 0.00033779 -0.020715 -1.3617E-05 0.49315 0.00032418 657.857660404534 662.360776995554 101.71 0.48404 101.71 101.53 102.02 0 89 37 4 0 0 0 0.0018221 2 56765 75.387 59.249 1 2.2685 1.9861 0 4197300 1198800 2998500 17249 2150 6514 6666 27004;27005 27004 ILNMDFETEVDK 12 1 0 Oxidation (M) _ILNM(ox)DFETEVDK_ ILNM(1)DFETEVDK ILNM(106.29)DFETEVDK 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3452 2 735.345057 1468.67556 70254.95 0.58772 0.00043218 -0.65235 -0.0004797 -0.064626 -4.7522E-05 735.345100742936 739.352184985098 72.186 0.81233 72.186 71.786 72.598 0 370 61 7 0 0 0 6.6793E-06 2 42080 106.29 106.29 1 1.4442 1.561 0 35401000 15311000 20090000 17250 313 6515 6667 27006;27007 27007 227 ILNMDFETEVDK 12 1 0 Oxidation (M) _ILNM(ox)DFETEVDK_ ILNM(1)DFETEVDK ILNM(113.63)DFETEVDK 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3457 2 735.345057 1468.67556 71193.47 0.61121 0.00044945 -0.14657 -0.00010778 0.46464 0.00034167 735.345103384829 739.352071934864 71.144 0.78271 71.144 70.695 71.478 0 275 58 6 0 0 0 2.5326E-08 2 42463 113.63 105.98 1 1.5297 1.7076 0 52602000 20210000 32393000 17251 313 6515 6667 27008;27009 27009 227 ILNMDFETEVDK 12 1 0 Oxidation (M) _ILNM(ox)DFETEVDK_ ILNM(1)DFETEVDK ILNM(53.24)DFETEVDK 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.3524 2 735.345057 1468.67556 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.544 1 82.544 82.044 83.044 0 0 0 0 0.007698 1 44912 53.237 41.644 1 17252 313 6515 6667 27010 27010 227 ILNMDFETEVDK 12 1 0 Oxidation (M) _ILNM(ox)DFETEVDK_ ILNM(1)DFETEVDK ILNM(61.82)DFETEVDK 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.353 2 735.345057 1468.67556 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.722 1 82.722 82.222 83.222 7.6294E-06 0 0 0 0.003014 1 44191 61.815 45.591 1 17253 313 6515 6667 27011 27011 227 ILNMDFETEVDK 12 1 0 Unmodified _ILNMDFETEVDK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 731.357 2 727.3476 1452.68065 72874.49 0.83831 0.00060975 0.18784 0.00013663 1.0262 0.00074637 727.347610449346 731.355026218704 108.37 0.60049 108.37 108.13 108.73 0 117 29 7 0 0 0 0.00087998 2 62191 64.439 34.966 1 1.4411 1.1317 0 3947200 1757100 2190100 17254 313 6515 6668 27012;27013 27012 ILNMDFETEVDK 12 1 0 Unmodified _ILNMDFETEVDK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.8559 2 727.3476 1452.68065 72773.48 0.66823 0.00048604 0.359 0.00026111 1.0272 0.00074715 727.347164719517 731.354803343384 108.32 0.65236 108.32 108.03 108.68 0 110 32 6 0 0 0 0.0016338 2 61314 60.641 35.866 1 1.7251 1.3772 0 4115600 1812500 2303100 17255 313 6515 6668 27014;27015 27015 ILNNSGLPITSAIDLEDAAK 20 1 0 Unmodified _ILNNSGLPITSAIDLEDAAK_ 0 0 0 A0A024R325;Q96I99;Q3ZCW5;H0Y852;Q9Y436 A0A024R325 A0A024R325 SUCLG2;DKFZp586M2023 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1032.0587 2 1028.05205 2054.08955 61990.74 0.46337 0.00047637 -0.56035 -0.00057607 -0.096981 -9.9702E-05 1028.55352202744 1032.05752120962 117.86 0.43044 117.86 117.65 118.08 -7.6294E-06 100 25 7 0 0 0 3.0863E-06 2 75599 62.287 62.287 1 3.1386 3.2485 0 11157000 2992500 8164100 17256 126 6516 6669 27016;27017 27017 ILNNSGLPITSAIDLEDAAK 20 1 0 Unmodified _ILNNSGLPITSAIDLEDAAK_ 0 0 0 A0A024R325;Q96I99;Q3ZCW5;H0Y852;Q9Y436 A0A024R325 A0A024R325 SUCLG2;DKFZp586M2023 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1032.561 2 1028.05205 2054.08955 60828.26 0.30175 0.00031022 -0.4021 -0.00041338 -0.10035 -0.00010316 1028.05172504846 1032.56001559999 117.44 0.43857 117.44 117.19 117.63 0 104 25 7 0 0 0 5.2865E-06 1 77086 56.569 56.569 1 3.2601 3.2654 0 15724000 3481700 12243000 17257 126 6516 6669 27018 27018 ILNPEEIEK 9 1 0 Unmodified _ILNPEEIEK_ 0 0 0 Q05DH1;A0A0K0K1K4;O14818;H0Y586 Q05DH1 Q05DH1 PSMA7 Proteasome subunit alpha type;Proteasome subunit alpha type-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.7792 2 542.797872 1083.58119 79825.57 0.78962 0.00042861 -1.0734 -0.00058265 -0.2838 -0.00015405 542.797215048035 546.804348219951 58.999 0.32607 58.999 58.828 59.154 0 75 29 4 0 0 0 0.0066178 1 34255 66.504 59.886 1 1.7948 1.8099 0 16226000 4459700 11766000 17258 539 6517 6670 27019 27019 ILPEAHQR 8 0 1 Unmodified _ILPEAHQR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;B4DT32 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 321.8506 3 321.850531 962.529764 106116.8 -0.009793 -3.1519E-06 0.20863 6.7148E-05 0.19884 6.3996E-05 321.850479466701 325.18672505184 19.166 0.35652 19.166 18.925 19.282 0 67 24 4 0 0 0 0.012647 1 5871 46.994 46.994 1 1.0344 1.0583 0 10025000 5165700 4859700 17259 363 6518 6671 27020 27020 ILPEAHQR 8 0 1 Unmodified _ILPEAHQR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;B4DT32 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 321.8503 3 321.850531 962.529764 109349 -0.14515 -4.6718E-05 0.49189 0.00015832 0.34674 0.0001116 321.850561039062 325.186717302544 19.148 0.1255 19.148 19.07 19.196 0 22 4 6 0 0 0 0.00072702 1 5626 100.45 100.45 1 0.84893 0.8568 0 19688000 11068000 8620300 17260 363 6518 6671 27021 27021 ILPEIIPILEEGLR 14 0 1 Unmodified _ILPEIIPILEEGLR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.4443 2 802.984724 1603.95489 68195.61 0.66037 0.00053027 0.51055 0.00040997 1.1709 0.00094024 803.485795075371 807.989389941315 133.58 0.13979 133.58 133.5 133.64 0 12 2 6 0 0 0 1.1946E-09 1 87576 120.96 120.96 1 1.8091 1.8813 0 13508000 5626300 7882000 17261 1205 6519 6672 27022 27022 ILPQDVILK 9 1 0 Unmodified _ILPQDVILK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.8397 2 519.831517 1037.64848 84937.45 0.7776 0.00040422 -0.068562 -3.564E-05 0.70904 0.00036858 519.8313955124 523.838544273045 90.58 1.3238 90.58 89.796 91.119 -7.6294E-06 412 108 5 0 0 0 0.00096668 3 54793 91.853 75.313 1 0.82269 0.90611 0 55382000 28987000 26394000 17262 899;1099 6520 6673 27023;27024;27025 27025 ILPQDVILK 9 1 0 Unmodified _ILPQDVILK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.8386 2 519.831517 1037.64848 84890.51 0.45393 0.00023597 -0.13606 -7.0729E-05 0.31787 0.00016524 519.831326587072 523.838443635385 89.517 1.2389 89.517 88.895 90.134 0 415 104 6 0 0 0 0.007781 2 55479 61.679 51.211 1 0.78979 0.88541 0 79439000 43358000 36081000 17263 899;1099 6520 6673 27026;27027 27027 ILPTLEAVAALGNK 14 1 0 Unmodified _ILPTLEAVAALGNK_ 0 0 0 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63;X6R6Z1 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.4291 2 705.421759 1408.82897 73409.84 0.71459 0.00050408 0.62725 0.00044248 1.3418 0.00094656 705.422272116932 709.429199791464 115.23 0.8091 115.23 114.75 115.56 7.6294E-06 213 52 7 0 0 0 0.00011993 2 73153 81.865 63.609 1 1.197 1.1733 0 22464000 10514000 11949000 17264 1049 6521 6674 27028;27029 27028 ILPTLEAVAALGNK 14 1 0 Unmodified _ILPTLEAVAALGNK_ 0 0 0 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63;X6R6Z1 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.4296 2 705.421759 1408.82897 73750.66 0.68977 0.00048658 0.43589 0.00030748 1.1257 0.00079406 705.421937881676 709.429059802921 114.64 0.78871 114.64 114.21 115 0 213 50 8 0 0 0 5.8075E-05 2 74523 91.855 65.136 1 1.2056 1.2205 0 29105000 12878000 16227000 17265 1049 6521 6674 27030;27031 27031 ILPTLEAVAALGNK 14 1 0 Unmodified _ILPTLEAVAALGNK_ 0 0 0 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63;X6R6Z1 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.4221 2 705.421759 1408.82897 72762.81 0.74524 0.00052571 0.47443 0.00033468 1.2197 0.00086039 705.422164979116 709.429053317924 127.01 0.78802 127.01 126.75 127.54 0 121 33 6 0 0 0 0.0088712 1 76422 37.968 28.015 1 0.88095 0.69617 0 4129200 2107300 2021900 17266 1049 6521 6674 27032 27032 ILPTLEAVAALGNK 14 1 0 Unmodified _ILPTLEAVAALGNK_ 0 0 0 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63;X6R6Z1 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.4223 2 705.421759 1408.82897 72943.8 0.59312 0.0004184 0.52439 0.00036991 1.1175 0.00078832 705.422062290163 709.42912118294 126.81 0.9045 126.81 126.55 127.45 0 126 38 6 0 0 0 0.0031935 1 75388 47.559 37.327 1 0.83995 0.66826 0 4053800 2197200 1856700 17267 1049 6521 6674 27033 27033 ILPVETDK 8 1 0 Unmodified _ILPVETDK_ 0 0 0 A0A024RC75;O14647 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.7707 2 457.7633 913.512048 91167.11 0.37826 0.00017315 -0.039651 -1.8151E-05 0.3386 0.000155 457.763117959413 461.77021418577 41.05 0.48976 41.05 40.764 41.253 0 106 40 4 0 0 0 0.042651 1 21565 46.426 37.653 1 0.73409 0.72296 0 24247000 12323000 11924000 17268 354 6522 6675 27034 27034 ILPVETDK 8 1 0 Unmodified _ILPVETDK_ 0 0 0 A0A024RC75;O14647 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.7705 2 457.7633 913.512048 91460.05 0.46476 0.00021275 -0.30883 -0.00014137 0.15593 7.1379E-05 457.762989380384 461.770202242328 40.126 0.40372 40.126 39.837 40.24 0 95 34 4 0 0 0 0.012634 1 21343 67.169 47.393 1 0.73096 0.74238 0 29954000 17150000 12804000 17269 354 6522 6675 27035 27035 ILPVFDEPPNPTNVEESLK 19 1 0 Unmodified _ILPVFDEPPNPTNVEESLK_ 0 0 0 Q5HYL6;Q9NYL9;H0YKU1;H0YNJ8 Q5HYL6 Q5HYL6 DKFZp686E1899;TMOD3 Tropomodulin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1070.0544 2 1069.55443 2137.0943 59713.51 0.37544 0.00040156 -0.087204 -9.327E-05 0.28824 0.00030829 1069.5540344779 1074.06281418291 116.98 0.48109 116.98 116.74 117.22 0 130 28 7 0 0 0 0.00058769 3 76738 38.178 38.178 1 1.6116 1.7267 0 21267000 8086400 13181000 17270 1808 6523 6676 27036;27037;27038 27038 ILPVGGIK 8 1 0 Unmodified _ILPVGGIK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;K7ERR6 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 402.7755 2 398.768189 795.521825 NaN NaN NaN 0.36569 0.00014583 NaN NaN NaN NaN 61.954 0.51296 61.954 61.742 62.255 -3.8147E-06 0 0 0 0.012813 1 35525 73.039 6.0453 1 NaN NaN 0 14468000 0 14468000 17271 946 6524 6677 27039 27039 ILPVGGIK 8 1 0 Unmodified _ILPVGGIK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;K7ERR6 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 402.7752 2 398.768189 795.521825 99988.98 0.045456 1.8126E-05 0.035903 1.4317E-05 0.081359 3.2444E-05 398.768088759515 402.775182344365 60.567 0.4489 60.567 60.389 60.838 0 81 32 5 0 0 0 0.013659 1 35441 64.803 5.1624 1 4.8596 5.2473 0 21860000 5297800 16562000 17272 946 6524 6677 27040 27040 ILQAVNFPFLVK 12 1 0 Unmodified _ILQAVNFPFLVK_ 0 0 0 Q15136;B7Z708;K7ERP6;A8K8B9;A0A024R7J0;P17612 Q15136 Q15136 KIN27;PRKACA cAMP-dependent protein kinase catalytic subunit alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.4282 2 694.918655 1387.82276 NaN NaN NaN -0.10355 -7.1961E-05 NaN NaN NaN NaN 124.05 0.27264 124.05 123.9 124.17 0 0 0 0 0.01721 1 80512 52.255 44.609 1 NaN NaN 0 1432200 0 1432200 17273 227 6525 6678 27041 27041 ILQAVNFPFLVK 12 1 0 Unmodified _ILQAVNFPFLVK_ 0 0 0 Q15136;B7Z708;K7ERP6;A8K8B9;A0A024R7J0;P17612 Q15136 Q15136 KIN27;PRKACA cAMP-dependent protein kinase catalytic subunit alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.9279 2 694.918655 1387.82276 NaN NaN NaN 0.23088 0.00016044 NaN NaN NaN NaN 123.59 0.22867 123.59 123.44 123.67 7.6294E-06 0 0 0 0.0052029 1 82021 62.582 43.311 1 NaN NaN 0 1795700 0 1795700 17274 227 6525 6678 27042 27042 ILQDGGLQVVEK 12 1 0 Unmodified _ILQDGGLQVVEK_ 0 0 0 O43175 O43175 O43175 PHGDH D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.8771 2 649.86936 1297.72417 75860.8 0.73001 0.00047441 -0.026739 -1.7377E-05 0.70327 0.00045704 649.869349153852 653.876333166377 71.376 1.0993 71.376 70.817 71.916 0 406 93 7 0 0 0 0.00012263 1 41397 94.465 47.268 1 3.0264 3.3068 0 51032000 12393000 38639000 17275 1382 6526 6679 27043 27043 ILQDGGLQVVEK 12 1 0 Unmodified _ILQDGGLQVVEK_ 0 0 0 O43175 O43175 O43175 PHGDH D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.8765 2 649.86936 1297.72417 75599.41 0.65759 0.00042735 -0.11286 -7.3343E-05 0.54473 0.000354 649.869321324228 653.876308990168 70.192 1.0716 70.192 69.728 70.799 0 383 87 7 0 0 0 0.00015428 1 41638 92.611 53.306 1 3.0214 3.3861 0 80257000 17669000 62588000 17276 1382 6526 6679 27044 27044 ILQDGGLQVVEK 12 1 0 Unmodified _ILQDGGLQVVEK_ 0 0 0 O43175 O43175 O43175 PHGDH D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.8766 2 649.86936 1297.72417 75229.91 0.69464 0.00045143 -0.30929 -0.000201 0.38535 0.00025043 649.869186413344 653.876199334339 81.484 0.83263 81.484 81.17 82.002 0 196 49 6 0 0 0 0.00019503 2 44127 77.744 30.853 1 1.9264 1.5357 0 6813100 2217500 4595600 17277 1382 6526 6679 27045;27046 27045 ILQDGGLQVVEK 12 1 0 Unmodified _ILQDGGLQVVEK_ 0 0 0 O43175 O43175 O43175 PHGDH D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.8766 2 649.86936 1297.72417 75975.16 0.61706 0.00040101 0.031678 2.0586E-05 0.64874 0.00042159 649.86939508364 653.876462374299 81.736 0.87657 81.736 81.303 82.18 -7.6294E-06 163 47 6 0 0 0 0.00043504 3 43389 71.03 31.284 1 1.9775 1.6162 0 5577700 1877900 3699800 17278 1382 6526 6679 27047;27048;27049 27047 ILQDIASGSHPFSQVLK 17 1 0 Unmodified _ILQDIASGSHPFSQVLK_ 0 0 0 B4DJ81;E5KRK5;P28331 B4DJ81 B4DJ81 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.6752 3 614.003626 1838.98905 NaN NaN NaN 0.10728 6.5868E-05 NaN NaN NaN NaN 90.235 0.36261 90.235 90.11 90.473 0 0 0 0 0.0024809 1 55840 45.723 19.288 1 NaN NaN 0 9311600 0 9311600 17279 986 6527 6680 27050 27050 ILQDSLGGR 9 0 1 Unmodified _ILQDSLGGR_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.7739 2 479.769448 957.524344 86444.79 0.035508 1.7036E-05 0.12914 6.1957E-05 0.16465 7.8993E-05 479.770033642898 484.773842348093 40.015 0.54412 40.015 39.73 40.274 0 138 44 5 0 0 0 0.00065244 1 20859 96.253 33.539 1 2.8839 2.9739 0 14036000 2825600 11210000 17280 1602 6528 6681 27051 27051 ILQDSLGGR 9 0 1 Unmodified _ILQDSLGGR_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7741 2 479.769448 957.524344 85812.02 0.1834 8.799E-05 -0.053636 -2.5733E-05 0.12976 6.2257E-05 479.770034562647 484.773571840724 39.04 0.48315 39.04 38.817 39.3 0 118 39 5 0 0 0 0.001665 2 20579 82.452 27.011 1 2.8626 3.1306 0 30576000 10159000 20416000 17281 1602 6528 6681 27052;27053 27052 ILQEDPTNTAAR 12 0 1 Unmodified _ILQEDPTNTAAR_ 0 0 0 Q53HG5;A8K4K9;Q15006;H0YAS9 Q53HG5 Q53HG5 EMC2 ER membrane protein complex subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.848 2 664.843873 1327.67319 NaN NaN NaN 0.15264 0.00010148 NaN NaN NaN NaN 33.755 0.42479 33.755 33.57 33.995 0 0 0 0 0.016329 1 16913 52.579 21.35 1 NaN NaN 0 3815400 0 3815400 17282 736 6529 6682 27054 27054 ILQEDPTNTAAR 12 0 1 Unmodified _ILQEDPTNTAAR_ 0 0 0 Q53HG5;A8K4K9;Q15006;H0YAS9 Q53HG5 Q53HG5 EMC2 ER membrane protein complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.8488 2 664.843873 1327.67319 75889.73 0.59211 0.00039366 0.48622 0.00032326 1.0783 0.00071692 664.844300987789 669.848335795974 33.164 0.35631 33.164 33 33.356 0 100 31 5 0 0 0 0.0075566 1 16571 48.44 22.546 1 0.72017 0.72993 0 20174000 11032000 9142300 17283 736 6529 6682 27055 27055 ILQEDPTNTAAR 12 0 1 Unmodified _ILQEDPTNTAAR_ 0 0 0 Q53HG5;A8K4K9;Q15006;H0YAS9 Q53HG5 Q53HG5 EMC2 ER membrane protein complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.8442 2 664.843873 1327.67319 80770.82 0.31929 0.00021228 0.3601 0.00023941 0.67939 0.00045169 664.8439814798 669.848409211385 38.794 0.40925 38.794 38.608 39.018 0 66 31 4 0 0 0 0.032489 1 17256 35.511 18.735 1 0.55799 0.48018 0 1727200 722210 1005000 17284 736 6529 6682 27056 27056 ILQEGVDPK 9 1 0 Unmodified _ILQEGVDPK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.7794 2 499.779482 997.544411 86187.29 -0.025115 -1.2552E-05 0.5044 0.00025209 0.47929 0.00023954 499.779638060799 503.786721984631 33.44 0.60777 33.44 33.118 33.726 0 188 50 6 0 0 0 0.013178 1 16777 56.81 38.271 1 1.2391 1.2559 0 29414000 15200000 14214000 17285 1228 6530 6683 27057 27057 ILQELPSVSQETLK 14 1 0 Unmodified _ILQELPSVSQETLK_ 0 0 0 A0A1B0GW95;B4DGM5;B4DL52;Q96ST2 A0A1B0GW95 A0A1B0GW95 IWS1 Protein IWS1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.9543 2 792.945795 1583.87704 NaN NaN NaN -0.2287 -0.00018135 NaN NaN NaN NaN 91.048 0.53741 91.048 90.845 91.382 0 0 0 0 1.7394E-09 1 55019 106.29 30.148 1 NaN NaN 0 11939000 0 11939000 17286 634 6531 6684 27058 27058 ILQELPSVSQETLK 14 1 0 Unmodified _ILQELPSVSQETLK_ 0 0 0 A0A1B0GW95;B4DGM5;B4DL52;Q96ST2 A0A1B0GW95 A0A1B0GW95 IWS1 Protein IWS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.9527 2 792.945795 1583.87704 70596.57 1.2691 0.0010063 -0.96623 -0.00076617 0.30285 0.00024014 793.445894696091 796.952561135833 90.398 0.83655 90.398 90.051 90.888 0 233 69 7 0 0 0 0.0085091 1 55726 38.58 6.9407 1 0.71033 0.72107 0 26357000 11290000 15067000 17287 634 6531 6684 27059 27059 ILQGGVGIPHIR 12 0 1 Unmodified _ILQGGVGIPHIR_ 0 0 0 V9HW00;P48729;Q05DL3;Q6PJ06;E5RG27;D6RGE5 V9HW00 V9HW00 HEL-S-77p;CSNK1A1 Casein kinase I isoform alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.9266 3 420.59094 1258.75099 102973.4 0.1884 7.9239E-05 -0.034573 -1.4541E-05 0.15383 6.4699E-05 420.591152766235 423.926861651664 72.363 0.57391 72.363 72.071 72.645 0 138 52 4 0 0 0 0.0035405 2 43323 45.661 45.661 1 1.1367 1.1397 0 17902000 8197100 9705300 17288 1577 6532 6685 27060;27061 27060 ILQIITELIK 10 1 0 Unmodified _ILQIITELIK_ 0 0 0 A0A087WYN9;Q7Z478 A0A087WYN9 A0A087WYN9 DHX29 ATP-dependent RNA helicase DHX29 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.3941 2 592.386657 1182.75876 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.89 1 126.89 126.39 127.39 7.6294E-06 0 0 0 0.00052681 1 82605 70.919 62.056 1 17289 435 6533 6686 27062 27062 ILQIITELIK 10 1 0 Unmodified _ILQIITELIK_ 0 0 0 A0A087WYN9;Q7Z478 A0A087WYN9 A0A087WYN9 DHX29 ATP-dependent RNA helicase DHX29 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.8961 2 592.386657 1182.75876 88403.55 1.0458 0.00061953 -0.11722 -6.9438E-05 0.92861 0.0005501 592.386588475779 596.393497633198 126.48 0.52303 126.48 126.21 126.73 0 77 31 4 0 0 0 0.0041076 1 84378 61.962 61.962 1 1.2884 1.4221 0 2600100 1304500 1295600 17290 435 6533 6686 27063 27063 ILQLQEK 7 1 0 Unmodified _ILQLQEK_ 0 0 0 A0A024R0F1;Q9UNY4;X6RI15 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.2657 2 436.26601 870.517468 94725.43 0.49613 0.00021644 2.4689 0.0010771 2.9651 0.0012936 436.265679352963 440.273163813931 41.294 0.39926 41.294 41.062 41.461 0 144 32 7 0 0 0 0.016891 1 21667 97.602 11.515 1 0.71786 0.77653 0 35821000 20727000 15094000 17291 44 6534 6687 27064 27064 ILQLVATGAVR 11 0 1 Unmodified _ILQLVATGAVR_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A1B0GTT3;A0A0U1RQQ5 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.8586 2 570.858598 1139.70264 82058.24 0.78636 0.0004489 -0.03466 -1.9786E-05 0.7517 0.00042912 570.858517107498 575.862699537161 84.789 0.50143 84.789 84.58 85.081 0 151 41 5 0 0 0 0.00036511 1 50800 84.213 54.739 1 1.3804 1.4252 0 23936000 9062300 14874000 17292 1575 6535 6688 27065 27065 ILQLVATGAVR 11 0 1 Unmodified _ILQLVATGAVR_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A1B0GTT3;A0A0U1RQQ5 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.8587 2 570.858598 1139.70264 81217.35 0.89063 0.00050842 -0.27257 -0.0001556 0.61806 0.00035283 570.858408507044 575.862563646942 83.67 0.47269 83.67 83.494 83.967 0 139 39 5 0 0 0 0.00034577 1 51292 85.731 46.709 1 1.3487 1.3675 0 20227000 8786500 11440000 17293 1575 6535 6688 27066 27066 ILQLVATGAVR 11 0 1 Unmodified _ILQLVATGAVR_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A1B0GTT3;A0A0U1RQQ5 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.8593 2 570.858598 1139.70264 82335.59 0.79536 0.00045404 -0.12895 -7.361E-05 0.66641 0.00038043 570.858512823685 575.862736379324 96.93 0.54797 96.93 96.721 97.269 0 93 27 5 0 0 0 0.010084 1 54416 49.06 28.19 1 0.77052 0.66936 0 2244300 1178000 1066300 17294 1575 6535 6688 27067 27067 ILQVSFK 7 1 0 Unmodified _ILQVSFK_ 0 0 0 Q15717 Q15717 Q15717 ELAVL1 ELAV-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.7576 2 417.757821 833.501089 94774.89 0.31984 0.00013362 -0.13659 -5.7062E-05 0.18325 7.6555E-05 417.757649820224 421.764720586257 70.571 0.89159 70.571 70.186 71.078 0 263 73 5 0 0 0 0.03153 2 40988 66.993 14.546 1 1.4345 1.4088 0 23182000 9708600 13473000 17295 1764 6536 6689 27068;27069 27069 ILQVSFK 7 1 0 Unmodified _ILQVSFK_ 0 0 0 Q15717 Q15717 Q15717 ELAVL1 ELAV-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.7578 2 417.757821 833.501089 93952.1 0.19845 8.2904E-05 -0.13106 -5.4751E-05 0.06739 2.8153E-05 417.757683790955 421.76478585968 69.158 0.89424 69.158 68.902 69.796 0 262 75 5 0 0 0 0.020094 1 41089 94.407 14.03 1 1.4994 1.5241 0 26238000 11290000 14948000 17296 1764 6536 6689 27070 27070 ILSDIGLEYCK 11 1 0 Unmodified _ILSDIGLEYCK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.844 2 655.836671 1309.65879 74527.54 0.6524 0.00042786 0.97455 0.00063914 1.6269 0.001067 655.837501656408 659.843737335068 84.686 0.66279 84.686 84.4 85.063 0 234 55 7 0 0 0 0.00010563 1 51909 96.89 68.491 1 0.76144 0.822 0 38258000 23468000 14790000 17297 878 6537 6690 27071 27071 ILSDIGLEYCK 11 1 0 Unmodified _ILSDIGLEYCK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.8439 2 655.836671 1309.65879 74866.86 0.76363 0.00050082 -0.11821 -7.7524E-05 0.64543 0.00042329 656.338481879761 659.843584905375 97.693 0.7827 97.693 97.367 98.15 7.6294E-06 212 51 6 0 0 0 0.00041914 1 54968 79.974 57.888 1 1.8691 1.4825 0 4469400 1565700 2903700 17298 878 6537 6690 27072 27072 ILSDIGLEYCK 11 1 0 Unmodified _ILSDIGLEYCK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.8423 2 655.836671 1309.65879 75177.4 0.53364 0.00034998 0.12401 8.1329E-05 0.65765 0.00043131 655.836390056301 659.843877649278 97.623 0.82993 97.623 97.284 98.114 0 181 46 6 0 0 0 0.0012566 1 54083 68.893 39.806 1 2.0294 1.6018 0 3913000 1235600 2677400 17299 878 6537 6690 27073 27073 ILSFIQDQEEDYLK 14 1 0 Unmodified _ILSFIQDQEEDYLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 870.9385 2 870.938167 1739.86178 65694.05 0.65675 0.00057199 0.38146 0.00033223 1.0382 0.00090422 870.9377798911 874.945187512595 109.51 0.63319 109.51 109.17 109.8 0 271 47 7 0 0 0 1.4794E-16 4 68451 137.89 121.26 1 0.95089 1.037 0 50056000 25523000 24534000 17300 1887 6538 6691 27074;27075;27076;27077 27075 ILSFIQDQEEDYLK 14 1 0 Unmodified _ILSFIQDQEEDYLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.9459 2 870.938167 1739.86178 64839.01 0.73899 0.00064361 0.28107 0.00024479 1.0201 0.00088841 871.439256972034 874.944899459041 108.88 0.56892 108.88 108.66 109.23 7.6294E-06 266 42 8 0 0 0 2.8672E-09 2 69723 114.86 98.231 1 0.94046 1.0415 0 46175000 25830000 20344000 17301 1887 6538 6691 27078;27079 27079 ILSFIQDQEEDYLK 14 1 0 Unmodified _ILSFIQDQEEDYLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 875.4476 2 870.938167 1739.86178 64900.9 0.4695 0.0004089 0.40344 0.00035137 0.87293 0.00076027 870.938552680555 874.945349344098 120.52 1.0418 120.52 120.27 121.31 -7.6294E-06 237 48 9 0 0 0 6.8812E-07 2 71495 110.66 94.03 1 1.9481 1.577 0 23340000 7927200 15413000 17302 1887 6538 6691 27080;27081 27081 ILSFIQDQEEDYLK 14 1 0 Unmodified _ILSFIQDQEEDYLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 874.9461 2 870.938167 1739.86178 64415.05 0.5153 0.0004488 0.40028 0.00034862 0.91558 0.00079741 870.93843740349 874.945479997253 120.37 1.0032 120.37 120.08 121.08 7.6294E-06 303 51 8 0 0 0 6.8812E-07 1 70496 110.66 94.03 1 1.7847 1.4324 0 18273000 6819700 11453000 17303 1887 6538 6691 27082 27082 ILSGVVTK 8 1 0 Unmodified _ILSGVVTK_ 0 0 0 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 412.7698 2 408.763104 815.511654 93336.54 0.2189 8.9476E-05 -0.13853 -5.6624E-05 0.080369 3.2852E-05 408.763065772095 412.770004122953 41.766 0.98174 41.766 41.474 42.456 3.8147E-06 441 76 9 0 0 0 0.0092293 2 21921 75.213 28.787 1 0.88585 1.0591 0 827860000 430350000 397500000 17304 1641 6539 6692 27083;27084 27083 ILSGVVTK 8 1 0 Unmodified _ILSGVVTK_ 0 0 0 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.7632 2 408.763104 815.511654 93257.94 0.12901 5.2733E-05 -0.092921 -3.7983E-05 0.036086 1.4751E-05 408.763084371595 412.770056393154 40.573 0.82354 40.573 40.353 41.177 0 309 64 9 0 0 0 0.0031191 2 21598 97.798 40.517 1 1.0164 1.2017 0 1573300000 779130000 794140000 17305 1641 6539 6692 27085;27086 27086 ILSGVVTK 8 1 0 Unmodified _ILSGVVTK_ 0 0 0 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 408.7632 2 408.763104 815.511654 92317.04 -0.28983 -0.00011847 -0.0070177 -2.8686E-06 -0.29684 -0.00012134 408.763093004685 412.77009857507 47.199 1.585 47.199 46.925 48.51 3.8147E-06 563 118 10 0 0 0 0.040852 1 22772 47.082 13.531 1 1.0557 0.91505 0 125150000 58134000 67019000 17306 1641 6539 6692 27087 27087 ILSHLQQDSLK 11 1 0 Unmodified _ILSHLQQDSLK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.9101 3 427.910227 1280.70885 91827.83 0.047611 2.0373E-05 0.13012 5.5679E-05 0.17773 7.6053E-05 427.910246882841 430.58163900469 40.38 0.86839 40.38 40.125 40.993 0 262 76 7 0 0 0 0.0099592 1 21032 29.071 29.071 1 1.0073 1.1357 0 76444000 35890000 40555000 17307 2081 6540 6693 27088 27088 ILSHLQQDSLK 11 1 0 Unmodified _ILSHLQQDSLK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3691 2 641.361702 1280.70885 77382.29 0.73261 0.00046987 0.16761 0.0001075 0.90023 0.00057737 641.361723089513 645.369090578415 40.385 0.49806 40.385 40.189 40.687 0 117 43 6 0 0 0 0.00032579 1 21051 87.298 87.298 1 0.84308 0.90854 0 33877000 18754000 15123000 17308 2081 6540 6693 27089 27089 ILSHLQQDSLK 11 1 0 Unmodified _ILSHLQQDSLK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.9111 3 427.910227 1280.70885 92362.58 -0.24582 -0.00010519 0.24737 0.00010585 0.0015456 6.6139E-07 427.910378444551 430.581690028775 38.882 0.73162 38.882 38.535 39.266 0 294 62 7 0 0 0 0.009914 1 20410 36.955 27.848 1 0.91436 1.0295 0 69876000 35815000 34061000 17309 2081 6540 6693 27090 27090 ILSHLQQDSLK 11 1 0 Unmodified _ILSHLQQDSLK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.8705 2 641.361702 1280.70885 NaN NaN NaN 0.4641 0.00029766 NaN NaN NaN NaN 38.742 0.23784 38.742 38.57 38.807 0 0 0 0 0.00078428 2 20405 88.056 57.802 1 NaN NaN 0 11044000 0 11044000 17310 2081 6540 6693 27091;27092 27092 ILSHLQQDSLK 11 1 0 Unmodified _ILSHLQQDSLK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3621 2 641.361702 1280.70885 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.726 1 38.726 38.226 39.226 0 0 0 0 4.3414E-05 1 20384 84.198 44.153 1 17311 2081 6540 6693 27093 27093 ILSHLQQDSLK 11 1 0 Unmodified _ILSHLQQDSLK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.3695 2 641.361702 1280.70885 76788.95 0.44983 0.0002885 0.15187 9.74E-05 0.60169 0.0003859 641.361906780626 645.36879423853 46.06 0.72257 46.06 45.791 46.514 0 205 52 5 0 0 0 0.032358 1 22085 37.696 37.696 1 1.2136 1.0119 0 1735700 797620 938050 17312 2081 6540 6693 27094 27094 ILSHLQQDSLK 11 1 0 Unmodified _ILSHLQQDSLK_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.3624 2 641.361702 1280.70885 77663.5 0.52114 0.00033424 -0.18575 -0.00011913 0.33539 0.00021511 641.361564650723 645.36868627713 45.975 0.74428 45.975 45.639 46.383 0 197 49 6 0 0 0 0.032318 1 21526 37.717 37.717 1 1.2523 1.0383 0 1765500 745370 1020100 17313 2081 6540 6693 27095 27095 ILSHNPETQQVDIEILSSLPALR 23 0 1 Unmodified _ILSHNPETQQVDIEILSSLPALR_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.4695 3 858.469299 2572.38607 67953.47 1.102 0.00094605 -0.57446 -0.00049316 0.52756 0.00045289 858.803468996202 862.138133576605 121.18 0.43913 121.18 121.05 121.49 0 118 28 8 0 0 0 0.00048935 1 80202 32.752 32.752 1 0.7635 0.77182 0 9784900 5818200 3966700 17314 1552 6541 6694 27096 27096 ILSHNPETQQVDIEILSSLPALR 23 0 1 Unmodified _ILSHNPETQQVDIEILSSLPALR_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 862.1392 3 858.469299 2572.38607 67432.84 1.127 0.0009675 -0.70749 -0.00060736 0.41952 0.00036015 858.802878595042 862.13838338511 134.19 0.22169 134.19 134.08 134.3 0 56 10 8 0 0 0 0.046343 1 81881 10.621 8.3382 1 1.1245 0.96457 0 6222600 2605400 3617200 17315 1552 6541 6694 27097 27097 ILSLLEGQK 9 1 0 Unmodified _ILSLLEGQK_ 0 0 0 J3QRD1;Q59H65;P51648;Q68D64;J3QS00;I3L1M4 J3QRD1 J3QRD1 ALDH3A2;DKFZp686E23276 Fatty aldehyde dehydrogenase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.8054 2 500.8055 999.596446 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.123 1 78.123 77.623 78.623 0 0 0 0 0.043105 1 47341 48.794 13.499 1 17316 1338 6542 6695 27098 27098 ILSQQPVETEEVNK 14 1 0 Unmodified _ILSQQPVETEEVNK_ 0 0 0 Q13129 Q13129 Q13129 RLF Zinc finger protein Rlf MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.4298 2 807.422684 1612.83082 69681.77 0.77498 0.00062574 -0.023921 -1.9315E-05 0.75106 0.00060642 807.924228842245 811.429727961932 47.827 0.34914 47.827 47.616 47.965 0 78 32 5 0 0 0 0.0013668 1 25885 54.198 41.984 1 0.51296 0.5265 0 17558000 10327000 7230700 17317 1705 6543 6696 27099 27099 ILSQQPVETEEVNK 14 1 0 Unmodified _ILSQQPVETEEVNK_ 0 0 0 Q13129 Q13129 Q13129 RLF Zinc finger protein Rlf ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.4219 2 807.422684 1612.83082 NaN NaN NaN -0.29339 -0.00023689 NaN NaN NaN NaN 47.775 0.38785 47.775 47.616 48.003 0 0 0 0 0.00041083 1 25892 79.659 64.087 1 NaN NaN 0 10925000 10925000 0 17318 1705 6543 6696 27100 27100 ILSQQPVETEEVNK 14 1 0 Unmodified _ILSQQPVETEEVNK_ 0 0 0 Q13129 Q13129 Q13129 RLF Zinc finger protein Rlf MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.4315 2 807.422684 1612.83082 69793.74 0.76357 0.00061652 0.33498 0.00027047 1.0985 0.00088699 807.924483751169 811.429916318937 46.615 0.37138 46.615 46.482 46.853 3.8147E-06 119 31 5 0 0 0 1.1878E-05 2 25758 98.898 98.898 1 0.65961 0.71427 0 22081000 12571000 9510200 17319 1705 6543 6696 27101;27102 27102 ILSQQPVETEEVNK 14 1 0 Unmodified _ILSQQPVETEEVNK_ 0 0 0 Q13129 Q13129 Q13129 RLF Zinc finger protein Rlf MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.4308 2 807.422684 1612.83082 68396.38 0.54473 0.00043982 -0.01167 -9.4225E-06 0.53306 0.0004304 807.422518672313 811.429681917983 56.022 0.56121 56.022 55.738 56.299 3.8147E-06 189 39 6 0 0 0 0.00884 1 27459 38.021 38.021 1 1.8279 1.4713 0 3012100 956990 2055100 17320 1705 6543 6696 27103 27103 ILSQSTDSLNMR 12 0 1 Oxidation (M) _ILSQSTDSLNM(ox)R_ ILSQSTDSLNM(1)R ILSQSTDSLNM(43.51)R 0 1 0 D3DVA5;V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14;B4DJ49;B7Z977 D3DVA5 D3DVA5 ARHGEF2 Rho guanine nucleotide exchange factor 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.8497 2 690.843016 1379.67148 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.196 1 39.196 38.696 39.696 0 0 0 0 0.019202 1 20275 43.512 24.732 1 17321 1197 6544 6697 27104 27104 912 ILSVQGTEPLVLFK 14 1 0 Unmodified _ILSVQGTEPLVLFK_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.4662 2 772.458342 1542.90213 69703.73 0.81761 0.00063157 0.32132 0.0002482 1.1389 0.00087977 772.458594786181 776.465554650714 118.77 0.77491 118.77 118.43 119.21 0 292 45 10 0 0 0 1.0252E-46 2 76223 183 156.33 1 0.89963 1.0148 0 131820000 65902000 65920000 17322 2042 6545 6698 27105;27106 27106 ILSVQGTEPLVLFK 14 1 0 Unmodified _ILSVQGTEPLVLFK_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.4657 2 772.458342 1542.90213 69839.51 0.68632 0.00053016 0.13022 0.00010059 0.81655 0.00063075 772.458447153523 776.465462540648 118.21 0.77625 118.21 117.96 118.74 7.6294E-06 299 47 10 0 0 0 1.0938E-29 2 77630 156.48 136.72 1 0.96766 1.1131 0 175350000 86224000 89123000 17323 2042 6545 6698 27107;27108 27108 ILSVQGTEPLVLFK 14 1 0 Unmodified _ILSVQGTEPLVLFK_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.4658 2 772.458342 1542.90213 69067.35 0.75839 0.00058583 0.21588 0.00016676 0.97427 0.00075258 772.458523116122 776.46553810971 130.99 1.0863 130.99 130.73 131.81 0 263 48 10 0 0 0 1.7686E-14 2 79359 132.25 115.22 1 1.3147 1.1252 0 71917000 29517000 42400000 17324 2042 6545 6698 27109;27110 27109 ILSVQGTEPLVLFK 14 1 0 Unmodified _ILSVQGTEPLVLFK_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.9603 2 772.458342 1542.90213 69100.45 1.0815 0.00083541 -0.10453 -8.0742E-05 0.97697 0.00075467 772.45822889135 776.465299484855 130.76 0.99323 130.76 130.46 131.45 0 270 43 10 0 0 0 3.806E-21 2 78291 143.96 121.32 1 1.3085 1.1193 0 114730000 50084000 64651000 17325 2042 6545 6698 27111;27112 27112 ILSYNR 6 0 1 Unmodified _ILSYNR_ 0 0 0 P11387;B9EG90;Q9BVT2;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 383.2163 2 383.216321 764.418088 95870.05 0.10703 4.1016E-05 0.041954 1.6077E-05 0.14898 5.7093E-05 383.216366697185 388.220316450112 27.751 0.9784 27.751 27.339 28.317 1.9073E-06 304 66 9 0 0 0 0.034509 1 12767 113.82 38.972 1 1.0974 1.301 0 561510000 272190000 289320000 17326 1470 6546 6699 27113 27113 ILSYNR 6 0 1 Unmodified _ILSYNR_ 0 0 0 P11387;B9EG90;Q9BVT2;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 383.2165 2 383.216321 764.418088 95944.83 0.086039 3.2972E-05 0.068823 2.6374E-05 0.15486 5.9346E-05 383.216405087979 388.220342639316 30.97 1.1763 30.97 30.673 31.85 1.9073E-06 347 71 9 0 0 0 0.055359 1 12936 71.575 16.118 1 1.4312 1.2337 0 69541000 27745000 41796000 17327 1470 6546 6699 27114 27114 ILSYNR 6 0 1 Unmodified _ILSYNR_ 0 0 0 P11387;B9EG90;Q9BVT2;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 383.2165 2 383.216321 764.418088 95225.28 -0.029323 -1.1237E-05 0.26969 0.00010335 0.24037 9.2114E-05 383.216469564232 388.220421031406 31.023 1.5156 31.023 30.738 32.254 1.9073E-06 275 80 8 0 0 0 0.053983 1 12437 77.906 10.53 1 1.4824 1.2935 0 64798000 27608000 37189000 17328 1470 6546 6699 27115 27115 ILTATVDNANILLQIDNAR 19 0 1 Unmodified _ILTATVDNANILLQIDNAR_ 0 0 0 CON__Q04695;Q04695;F5GWP8;K7EPJ9;B4E2P9 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1039.5774 2 1034.57349 2067.13242 60736.7 0.46727 0.00048343 0.32971 0.00034111 0.79698 0.00082453 1035.07511242929 1040.0793686211 131.58 0.45772 131.58 131.41 131.86 0 92 21 7 0 0 0 0.029391 1 79887 22.857 22.857 1 0.72794 0.61864 0 5280300 3086500 2193800 + 17329 1168 6547 6700 27116 27116 ILTATVDNANILLQIDNAR 19 0 1 Unmodified _ILTATVDNANILLQIDNAR_ 0 0 0 CON__Q04695;Q04695;F5GWP8;K7EPJ9;B4E2P9 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1035.0765 2 1034.57349 2067.13242 61153.18 0.7097 0.00073424 0.068511 7.088E-05 0.77821 0.00080512 1035.07455097014 1040.07979285942 131.44 0.25316 131.44 131.28 131.53 0 53 10 7 0 0 0 0.0020589 1 78857 35.303 32.741 1 0.66633 0.5892 0 3949400 2535100 1414400 + 17330 1168 6547 6700 27117 27117 ILTATVDNANVLLQIDNAR 19 0 1 Unmodified _ILTATVDNANVLLQIDNAR_ 0 0 0 CON__P02533;P02533 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1028.0681 2 1027.56566 2053.11677 NaN NaN NaN -0.014522 -1.4923E-05 NaN NaN NaN NaN 115.57 0.54605 115.57 115.36 115.9 0 0 0 0 3.9291E-17 1 73504 106.13 91.972 1 NaN NaN 0 41973000 41973000 0 + 17331 1150 6548 6701 27118 27118 ILTATVDNANVLLQIDNAR 19 0 1 Unmodified _ILTATVDNANVLLQIDNAR_ 0 0 0 CON__P02533;P02533 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1028.068 2 1027.56566 2053.11677 NaN NaN NaN 0.0025822 2.6534E-06 NaN NaN NaN NaN 115.11 0.5148 115.11 114.82 115.33 0 0 0 0 0.00021049 1 74927 61.212 52.162 1 NaN NaN 0 39951000 39951000 0 + 17332 1150 6548 6701 27119 27119 ILTATVDNANVLLQIDNAR 19 0 1 Unmodified _ILTATVDNANVLLQIDNAR_ 0 0 0 CON__P02533;P02533 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1028.0679 2 1027.56566 2053.11677 NaN NaN NaN 0.046136 4.7408E-05 NaN NaN NaN NaN 127.32 0.63139 127.32 127.02 127.65 0 0 0 0 2.0249E-06 1 76601 75.462 63.486 1 NaN NaN 0 31112000 31112000 0 + 17333 1150 6548 6701 27120 27120 ILTATVDNANVLLQIDNAR 19 0 1 Unmodified _ILTATVDNANVLLQIDNAR_ 0 0 0 CON__P02533;P02533 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1028.0682 2 1027.56566 2053.11677 NaN NaN NaN -0.33144 -0.00034057 NaN NaN NaN NaN 127.13 0.51541 127.13 126.89 127.4 -7.6294E-06 0 0 0 1.6315E-17 1 75620 113.25 98.566 1 NaN NaN 0 13365000 13365000 0 + 17334 1150 6548 6701 27121 27121 ILTDEMLLQACEGR 14 0 1 Oxidation (M) _ILTDEM(ox)LLQACEGR_ ILTDEM(1)LLQACEGR ILTDEM(109.24)LLQACEGR 0 1 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.9052 2 832.902747 1663.79094 67434.87 0.50871 0.00042371 -0.0054392 -4.5303E-06 0.50327 0.00041918 832.902315547742 837.905671838804 83.879 0.59384 83.879 83.527 84.121 0 153 49 5 0 0 0 5.6698E-07 3 50053 109.24 107.85 1 1.1086 1.118 0 15616000 6717500 8898800 17335 1820 6549 6702 27122;27123;27124 27122 1678 ILTDEMLLQACEGR 14 0 1 Oxidation (M) _ILTDEM(ox)LLQACEGR_ ILTDEM(1)LLQACEGR ILTDEM(118.48)LLQACEGR 0 1 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.9056 2 832.902747 1663.79094 67960.09 0.6574 0.00054755 -0.54379 -0.00045292 0.11361 9.4628E-05 833.403948788655 837.905734621189 82.887 0.50161 82.887 82.684 83.185 0 149 39 5 0 0 0 9.0787E-10 1 50785 118.48 109.53 1 1.1657 1.1694 0 19009000 7839100 11170000 17336 1820 6549 6702 27125 27125 1678 ILTDEMLLQACEGR 14 0 1 Oxidation (M) _ILTDEM(ox)LLQACEGR_ ILTDEM(1)LLQACEGR ILTDEM(44.85)LLQACEGR 0 1 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 832.9052 2 832.902747 1663.79094 64821.77 0.7444 0.00062001 0.74267 0.00061857 1.4871 0.0012386 832.903068909495 837.907136997249 96.035 0.62421 96.035 95.716 96.34 0 184 39 7 0 0 0 0.002325 1 53930 44.847 39.002 1 1.4762 1.2341 0 3543400 1366500 2176900 17337 1820 6549 6702 27126 27126 1678 ILTDEMLLQACEGR 14 0 1 Oxidation (M) _ILTDEM(ox)LLQACEGR_ ILTDEM(1)LLQACEGR ILTDEM(67.46)LLQACEGR 0 1 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.409 2 832.902747 1663.79094 65674.11 0.50497 0.00042059 1.0832 0.00090223 1.5882 0.0013228 832.903284199854 837.907811210245 95.95 0.58851 95.95 95.698 96.286 7.6294E-06 189 38 8 0 0 0 0.0001033 1 52938 67.456 61.611 1 1.7848 1.5541 0 3506300 1126000 2380200 17338 1820 6549 6702 27127 27127 1678 ILTDEMLLQACEGR 14 0 1 Unmodified _ILTDEMLLQACEGR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 824.9053 2 824.90529 1647.79603 NaN NaN NaN -1.6755 -0.0013821 NaN NaN NaN NaN 111.25 0.40079 111.25 111.03 111.43 0 0 0 0 0.0039168 1 64451 60.49 45.288 1 NaN NaN 0 1816900 1816900 0 17339 1820 6549 6703 27128 27128 ILTDEMLLQACEGR 14 0 1 Unmodified _ILTDEMLLQACEGR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 829.9096 2 824.90529 1647.79603 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.16 1 111.16 110.66 111.66 0 0 0 0 0.0010704 1 64369 76.655 61.084 1 17340 1820 6549 6703 27129 27129 ILTDYGFEGHPFR 13 0 1 Unmodified _ILTDYGFEGHPFR_ 0 0 0 Q9UF24;O75489 Q9UF24 Q9UF24 DKFZp586K0821;NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.595 3 517.924536 1550.75178 87144.94 0.65184 0.00033761 -0.3833 -0.00019852 0.26854 0.00013909 518.25931971946 521.260080640324 82.083 0.62027 82.083 81.764 82.384 7.6294E-06 104 53 4 0 0 0 0.0063045 1 49001 25.53 23.595 1 1.7511 1.7634 0 7814200 3142800 4671400 17341 1406 6550 6704 27130 27130 ILTFDQLALDSPK 13 1 0 Unmodified _ILTFDQLALDSPK_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.9126 2 730.903399 1459.79225 69695.77 1.1497 0.0008403 -0.029409 -2.1495E-05 1.1203 0.00081881 730.903483140056 734.910181136043 111.51 1.9653 111.51 111.15 113.11 0 786 141 12 0 0 0 4.485E-19 7 70075 146.71 104.52 1 0.90906 1.0958 0 1405800000 697800000 708030000 17342 16 6551 6705 27131;27132;27133;27134;27135;27136;27137 27133 ILTFDQLALDSPK 13 1 0 Unmodified _ILTFDQLALDSPK_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.9114 2 730.903399 1459.79225 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.48 1 113.48 112.98 113.98 7.6294E-06 0 0 0 0.0017486 1 71838 69.979 30.961 1 17343 16 6551 6705 27138 27138 ILTFDQLALDSPK 13 1 0 Unmodified _ILTFDQLALDSPK_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.9041 2 730.903399 1459.79225 69653.75 0.70578 0.00051586 0.049381 3.6093E-05 0.75516 0.00055195 730.903569698715 734.910316754057 111 1.964 111 110.51 112.47 0 822 143 11 0 0 0 6.8805E-09 6 71872 118.28 92.34 1 0.94347 1.1127 0 762220000 407910000 354310000 17344 16 6551 6705 27139;27140;27141;27142;27143;27144 27141 ILTFDQLALDSPK 13 1 0 Unmodified _ILTFDQLALDSPK_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.9033 2 730.903399 1459.79225 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.87 1 112.87 112.37 113.37 0 0 0 0 0.0027221 1 73128 78.653 52.138 1 17345 16 6551 6705 27145 27145 ILTFDQLALDSPK 13 1 0 Unmodified _ILTFDQLALDSPK_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.9111 2 730.903399 1459.79225 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.95 1 112.95 112.45 113.45 0 0 0 0 0.001183 1 73201 76.143 46.67 1 17346 16 6551 6705 27146 27146 ILTFDQLALDSPK 13 1 0 Unmodified _ILTFDQLALDSPK_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.9037 2 730.903399 1459.79225 70203.72 0.93383 0.00068254 0.20362 0.00014883 1.1374 0.00083136 730.903638051413 734.91053993645 122.66 1.6617 122.66 122.33 124 -7.6294E-06 525 76 12 0 0 0 1.6149E-23 4 73499 154.24 114.94 1 0.92688 0.8113 0 191330000 99013000 92321000 17347 16 6551 6705 27147;27148;27149;27150 27148 ILTFDQLALDSPK 13 1 0 Unmodified _ILTFDQLALDSPK_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.9043 2 730.903399 1459.79225 70328.27 0.93991 0.00068698 0.24082 0.00017601 1.1807 0.00086299 730.903590877807 734.910516121578 122.48 1.6072 122.48 122.17 123.78 0 533 75 12 0 0 0 1.8152E-14 6 72468 137.17 99.976 1 0.90963 0.78329 0 175580000 93332000 82247000 17348 16 6551 6705 27151;27152;27153;27154;27155;27156 27153 ILTGTDAPK 9 1 0 Unmodified _ILTGTDAPK_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 462.268 2 458.260925 914.507297 88445.77 0.065363 2.9953E-05 -0.14251 -6.5308E-05 -0.077149 -3.5354E-05 458.26089369047 462.267941752904 32.217 0.43814 32.217 32.024 32.463 0 76 22 5 0 0 0 0.035569 1 13277 43.808 12.518 1 1.971 1.5895 0 4296400 1317600 2978700 17349 695 6552 6706 27157 27157 ILTIEVK 7 1 0 Unmodified _ILTIEVK_ 0 0 0 Q6FI51;Q6FHS4;P25685;M0R080;M0QYT3;M0QXK0 Q6FI51 Q6FI51 DNAJB1 DnaJ homolog subfamily B member 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 412.2723 2 408.265479 814.516405 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.073 1 69.073 68.573 69.573 0 0 0 0 0.02938 1 40078 74.415 26.242 1 17350 1517 6553 6707 27158 27158 ILTIEVK 7 1 0 Unmodified _ILTIEVK_ 0 0 0 Q6FI51;Q6FHS4;P25685;M0R080;M0QYT3;M0QXK0 Q6FI51 Q6FI51 DNAJB1 DnaJ homolog subfamily B member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 412.2729 2 408.265479 814.516405 99299.38 0.019002 7.758E-06 0.03822 1.5604E-05 0.057222 2.3362E-05 408.265372644283 412.272585603198 67.807 0.57581 67.807 67.567 68.142 0 125 49 4 0 0 0 0.03153 1 40174 66.993 2.2168 1 1.6866 1.7034 0 8344500 3106700 5237800 17351 1517 6553 6707 27159 27159 ILTPIIFK 8 1 0 Unmodified _ILTPIIFK_ 0 0 0 H7C5L9;G5E9W7;G5E9V5;P82650;Q59GX8;Q8NBL6 H7C5L9 H7C5L9 MRPS22 28S ribosomal protein S22, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.8124 2 472.812596 943.61064 91177.38 0.36319 0.00017172 -0.14676 -6.9392E-05 0.21643 0.00010233 472.812513768713 476.819657250944 105.95 0.62544 105.95 105.59 106.21 0 152 48 4 0 0 0 0.014589 1 67291 62.659 33.76 1 1.1807 1.2328 0 19229000 9325800 9903500 17352 1277 6554 6708 27160 27160 ILTTIEDLDQK 11 1 0 Unmodified _ILTTIEDLDQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8534 2 644.853375 1287.6922 76260.76 0.64325 0.0004148 0.092324 5.9535E-05 0.73557 0.00047434 644.853435317091 648.860402073608 80.949 1.4073 80.949 80.664 82.071 0 548 120 9 0 0 0 0.00018263 2 48236 93.556 61.795 1 0.83311 0.96836 0 251830000 131810000 120020000 17353 69 6555 6709 27161;27162 27162 ILTTIEDLDQK 11 1 0 Unmodified _ILTTIEDLDQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.8611 2 644.853375 1287.6922 76256.83 0.8845 0.00057038 0.13834 8.9207E-05 1.0228 0.00065958 644.853530385261 648.860431810117 79.985 1.6156 79.985 79.682 81.297 0 460 132 6 0 0 0 2.7141E-12 1 48510 138.66 83.129 1 0.81621 0.96042 0 381230000 202450000 178780000 17354 69 6555 6709 27163 27163 ILTTIEDLDQK 11 1 0 Unmodified _ILTTIEDLDQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.8537 2 644.853375 1287.6922 75908.25 0.67076 0.00043254 0.2336 0.00015064 0.90437 0.00058318 644.853442216925 648.860642317984 92.58 1.6498 92.58 92.205 93.854 0 435 100 10 0 0 0 0.00036566 1 51580 84.17 44.168 1 1.7545 1.4738 0 53346000 18446000 34899000 17355 69 6555 6709 27164 27164 ILTTIEDLDQK 11 1 0 Unmodified _ILTTIEDLDQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.8605 2 644.853375 1287.6922 75997.25 0.38422 0.00024776 0.47087 0.00030364 0.85509 0.00055141 644.853512882399 648.860753581663 92.578 1.6936 92.578 91.954 93.648 0 423 99 10 0 0 0 0.0014091 2 50599 67.726 37.471 1 1.7383 1.4463 0 38916000 14499000 24417000 17356 69 6555 6709 27165;27166 27165 ILTTIEDLDQKK 12 2 0 Unmodified _ILTTIEDLDQKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.279 3 472.93633 1415.78716 91145.55 0.09571 4.5265E-05 0.1884 8.9101E-05 0.28411 0.00013437 472.936858963987 478.279032489481 63.885 0.6068 63.885 63.566 64.173 0 238 56 7 0 0 0 0.011682 1 37574 33.195 23.143 1 1.2202 1.3981 0 20041000 8677300 11364000 17357 69 6556 6710 27167 27167 ILTTIEDLDQKK 12 2 0 Unmodified _ILTTIEDLDQKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 716.9163 2 708.900857 1415.78716 73044.94 0.77244 0.00054758 0.86214 0.00061117 1.6346 0.0011588 708.900847634135 716.915675227204 74.789 0.50307 74.789 74.554 75.057 0 127 36 6 0 0 0 0.0037132 1 39644 66.19 31.658 1 2.0345 1.7576 0 4518900 1712100 2806800 17358 69 6556 6710 27168 27168 ILTTIEDLDQKK 12 2 0 Unmodified _ILTTIEDLDQKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 472.9365 3 472.93633 1415.78716 87692.32 0.29712 0.00014052 0.14176 6.7043E-05 0.43888 0.00020756 472.936627707264 478.278975509149 74.774 1.2758 74.774 74.505 75.781 0 449 92 9 0 0 0 0.029929 1 39684 23.092 15.367 1 1.8716 1.5963 0 18787000 6280100 12507000 17359 69 6556 6710 27169 27169 ILTTNTWSSELSK 13 1 0 Unmodified _ILTTNTWSSELSK_ 0 0 0 O60701;Q9NQ81 O60701 O60701 UGDH;GDH UDP-glucose 6-dehydrogenase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.3964 2 740.388113 1478.76167 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.458 1 80.458 79.958 80.958 0 0 0 0 0.015825 1 49031 50.353 21.396 1 17360 1397 6557 6711 27170 27170 ILVATNLFGR 10 0 1 Unmodified _ILVATNLFGR_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;B4DP52;A0A140T9X3;H0Y400;O00148;B4DX78;Q69YT6 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.3325 2 552.332216 1102.64988 81129.37 0.64234 0.00035479 0.057969 3.2018E-05 0.70031 0.0003868 552.332276154155 557.336334530046 102.95 1.0278 102.95 102.46 103.49 -7.6294E-06 446 88 7 0 0 0 0.00034412 2 63239 89.355 54.547 1 1.4712 1.692 0 144090000 59418000 84675000 17361 1359;362 6558 6712 27171;27172 27172 ILVATNLFGR 10 0 1 Unmodified _ILVATNLFGR_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;B4DP52;A0A140T9X3;H0Y400;O00148;B4DX78;Q69YT6 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.3318 2 552.332216 1102.64988 81052.02 0.61913 0.00034196 -0.13857 -7.6537E-05 0.48056 0.00026543 552.332158789866 557.336238743868 102.09 1.1424 102.09 101.68 102.82 0 395 90 7 0 0 0 0.00030431 2 64189 90.657 55.849 1 1.4992 1.7087 0 135950000 57294000 78654000 17362 1359;362 6558 6712 27173;27174 27174 ILVATNLFGR 10 0 1 Unmodified _ILVATNLFGR_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;B4DP52;A0A140T9X3;H0Y400;O00148;B4DX78;Q69YT6 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.3322 2 552.332216 1102.64988 81274.55 0.64685 0.00035728 -0.1023 -5.6502E-05 0.54455 0.00030077 552.332207668771 557.33624802004 114.84 0.82053 114.84 114.57 115.39 0 141 36 6 0 0 0 0.0029948 1 67102 66.546 34.612 1 0.80359 0.67313 0 10176000 5536900 4639200 17363 1359;362 6558 6712 27175 27175 ILVATNLFGR 10 0 1 Unmodified _ILVATNLFGR_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;B4DP52;A0A140T9X3;H0Y400;O00148;B4DX78;Q69YT6 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 552.3321 2 552.332216 1102.64988 NaN NaN NaN 0.01071 5.9155E-06 NaN NaN NaN NaN 114.68 0.79944 114.68 114.38 115.18 0 0 0 0 0.01668 1 66003 56.434 14.781 1 NaN NaN 0 7265800 7265800 0 17364 1359;362 6558 6712 27176 27176 ILVELATFLEK 11 1 0 Unmodified _ILVELATFLEK_ 0 0 0 Q9NZM1 Q9NZM1 Q9NZM1 MYOF Myoferlin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3896 2 638.381571 1274.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.02 1 125.02 124.52 125.52 0 0 0 0 0.0065062 1 83240 63.283 26.092 1 17365 2088 6559 6713 27177 27177 ILYNPLQGQK 10 1 0 Unmodified _ILYNPLQGQK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4 B4DI61 B4DI61 CYR61 Protein CYR61 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.3423 2 587.334956 1172.65536 NaN NaN NaN -0.051384 -3.018E-05 NaN NaN NaN NaN 74.849 0.82909 74.849 74.426 75.255 0 0 0 0 8.7194E-05 1 43922 97.798 59.712 1 NaN NaN 0 39838000 0 39838000 17366 979 6560 6714 27178 27178 ILYNPLQGQK 10 1 0 Unmodified _ILYNPLQGQK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4 B4DI61 B4DI61 CYR61 Protein CYR61 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.3423 2 587.334956 1172.65536 NaN NaN NaN -0.013588 -7.9805E-06 NaN NaN NaN NaN 73.714 1.0252 73.714 73.21 74.235 0 0 0 0 0.0033845 1 44142 76.774 55.311 1 NaN NaN 0 64030000 0 64030000 17367 979 6560 6714 27179 27179 ILYNPLQGQK 10 1 0 Unmodified _ILYNPLQGQK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.3363 2 587.334956 1172.65536 80149.77 0.50463 0.00029638 -0.10835 -6.3638E-05 0.39628 0.00023275 587.33504698527 591.34201734422 85.271 1.1147 85.271 84.906 86.021 0 283 70 7 0 0 0 0.0040804 1 46548 61.999 39.913 1 1.1622 0.90424 0 12445000 5655200 6789800 17368 979 6560 6714 27180 27180 ILYNPLQGQK 10 1 0 Unmodified _ILYNPLQGQK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.3362 2 587.334956 1172.65536 80067.17 0.58917 0.00034604 0.1758 0.00010326 0.76498 0.0004493 587.33502719118 591.342115522502 85.382 0.96074 85.382 85.008 85.968 0 303 59 9 0 0 0 0.011541 1 45757 51.854 51.854 1 1.2398 1.0233 0 11257000 5168600 6088500 17369 979 6560 6714 27181 27181 ILYSQCGDVMR 11 0 1 Oxidation (M) _ILYSQCGDVM(ox)R_ ILYSQCGDVM(1)R ILYSQCGDVM(111.46)R 0 1 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;F8VPF3;F8W1I5;A0A024RB31;B4E368;P14649 F8W1R7 F8W1R7 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3211 2 679.31558 1356.61661 73359.63 0.56838 0.00038611 -0.042224 -2.8683E-05 0.52616 0.00035743 679.31568296104 684.320191679858 39.561 0.51183 39.561 39.324 39.835 0 164 43 7 0 0 0 1.568E-06 2 20476 111.46 108.32 1 1.7256 1.7611 0 18774000 6201300 12573000 17370 1101 6561 6715 27182;27183 27182 844 ILYSQCGDVMR 11 0 1 Oxidation (M) _ILYSQCGDVM(ox)R_ ILYSQCGDVM(1)R ILYSQCGDVM(101.65)R 0 1 0 F8W1R7;J3KND3;G8JLA2;G3V1V0;B7Z6Z4;P60660;F8VPF3;F8W1I5;A0A024RB31;B4E368;P14649 F8W1R7 F8W1R7 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3206 2 679.31558 1356.61661 72654.13 0.58974 0.00040062 0.60915 0.00041381 1.1989 0.00081443 679.315628783206 684.320264320532 38.57 0.50109 38.57 38.316 38.817 0 171 43 5 0 0 0 1.3757E-05 2 20196 101.65 101.65 1 2.1283 2.3174 0 29101000 8522300 20578000 17371 1101 6561 6715 27184;27185 27184 844 IMADNPSWDGEK 12 1 0 Oxidation (M) _IM(ox)ADNPSWDGEK_ IM(1)ADNPSWDGEK IM(47.29)ADNPSWDGEK 0 1 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8012 2 689.800817 1377.58708 75617.04 0.80103 0.00055255 -0.043232 -2.9821E-05 0.7578 0.00052273 689.800439518386 693.808195744023 41.246 0.62807 41.246 40.972 41.6 0 126 52 5 0 0 0 0.0044537 2 21598 47.288 46.496 1 0.88888 0.87192 0 8822600 5560000 3262600 17372 1854 6562 6716 27186;27187 27187 1713 IMADNPSWDGEK 12 1 0 Oxidation (M) _IM(ox)ADNPSWDGEK_ IM(1)ADNPSWDGEK IM(45.83)ADNPSWDGEK 0 1 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.8067 2 689.800817 1377.58708 NaN NaN NaN -1.1148 -0.00076898 NaN NaN NaN NaN 41.407 0.21449 41.407 41.342 41.557 0 0 0 0 0.010808 1 21819 45.829 34.193 1 NaN NaN 0 2944200 0 2944200 17373 1854 6562 6716 27188 27188 1713 IMADNPSWDGEK 12 1 0 Oxidation (M) _IM(ox)ADNPSWDGEK_ IM(1)ADNPSWDGEK IM(73.78)ADNPSWDGEK 0 1 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.8077 2 689.800817 1377.58708 74654.22 0.7935 0.00054735 -0.41034 -0.00028306 0.38315 0.0002643 689.800409731026 693.807867656151 40.341 0.42278 40.341 40.112 40.535 0 85 36 4 0 0 0 0.0001208 1 21457 73.781 66.401 1 0.8532 0.87458 0 11809000 6737600 5071600 17374 1854 6562 6716 27189 27189 1713 IMAQIER 7 0 1 Oxidation (M) _IM(ox)AQIER_ IM(1)AQIER IM(46.43)AQIER 0 1 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.7377 2 438.73402 875.453487 NaN NaN NaN -0.18124 -7.9518E-05 NaN NaN NaN NaN 25.551 0.37321 25.551 25.352 25.725 0 0 0 0 0.025714 1 11117 46.426 13.955 1 NaN NaN 0 32811000 0 32811000 17375 1391 6563 6717 27190 27190 1064 IMAQIER 7 0 1 Oxidation (M) _IM(ox)AQIER_ IM(1)AQIER IM(87.28)AQIER 0 1 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.7382 2 438.73402 875.453487 90495.99 0.035845 1.5726E-05 0.12015 5.2714E-05 0.15599 6.844E-05 438.733875179554 443.738143635613 25.36 0.3606 25.36 25.106 25.467 -1.9073E-06 46 13 6 0 0 0 0.013122 2 10957 87.284 23.66 1 3.2671 3.5677 0 38607000 9692900 28915000 17376 1391 6563 6717 27191;27192 27191 1064 IMATPEQVGK 10 1 0 Oxidation (M) _IM(ox)ATPEQVGK_ IM(1)ATPEQVGK IM(75.04)ATPEQVGK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.2916 2 545.284074 1088.5536 82268.78 0.89561 0.00048836 -0.072501 -3.9534E-05 0.82311 0.00044883 545.284003526641 549.291014718382 26.784 0.59533 26.784 26.572 27.167 -1.9073E-06 106 21 8 0 0 0 0.00056747 1 12121 75.043 66.28 1 0.52026 0.59864 0 176230000 113690000 62534000 17377 82 6564 6718 27193 27193 79 IMATPEQVGK 10 1 0 Unmodified _IMATPEQVGK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.2863 2 537.286617 1072.55868 81903.3 0.50569 0.0002717 -0.48273 -0.00025936 0.022965 1.2339E-05 537.286322999321 541.293305473617 43.234 0.46505 43.234 43.017 43.482 0 117 28 6 0 0 0 0.0091454 1 20340 55.112 39.961 1 0.34254 0.26777 0 3826900 2775700 1051200 17378 82 6564 6719 27194 27194 IMDPNIVGSEHYDVAR 16 0 1 Oxidation (M) _IM(ox)DPNIVGSEHYDVAR_ IM(1)DPNIVGSEHYDVAR IM(47.64)DPNIVGSEHYDVAR 0 1 0 H0YH81;Q0QEN7;V9HW31;P06576 H0YH81 H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.6307 3 611.292959 1830.85705 NaN NaN NaN 0.45821 0.0002801 NaN NaN NaN NaN 60.922 0.17789 60.922 60.876 61.054 0 0 0 0 0.012398 1 35691 47.64 38.812 1 NaN NaN 0 8107500 0 8107500 17379 1292 6565 6720 27195 27195 986 IMEAIELYR 9 0 1 Oxidation (M) _IM(ox)EAIELYR_ IM(1)EAIELYR IM(66.62)EAIELYR 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.3049 2 577.299724 1152.5849 85487.68 0.44756 0.00025838 0.7581 0.00043765 1.2057 0.00069603 577.300075974777 582.304629983541 72.992 0.89787 72.992 72.35 73.248 7.6294E-06 172 70 4 0 0 0 0.0026545 1 42647 66.621 66.621 1 1.1237 1.1355 0 15412000 7595500 7816600 17380 1827 6566 6721 27196 27196 1685 IMEAIELYR 9 0 1 Oxidation (M) _IM(ox)EAIELYR_ IM(1)EAIELYR IM(65.47)EAIELYR 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3 2 577.299724 1152.5849 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.586 1 71.586 71.086 72.086 -7.6294E-06 0 0 0 0.0037308 1 42931 65.465 44.518 1 17381 1827 6566 6721 27197 27197 1685 IMEAIELYR 9 0 1 Oxidation (M) _IM(ox)EAIELYR_ IM(1)EAIELYR IM(78.52)EAIELYR 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.2999 2 577.299724 1152.5849 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.675 1 71.675 71.175 72.175 0 0 0 0 0.0013533 1 42998 78.516 55.445 1 17382 1827 6566 6721 27198 27198 1685 IMEFTTTLLNTSPEGWK 17 1 0 Oxidation (M) _IM(ox)EFTTTLLNTSPEGWK_ IM(1)EFTTTLLNTSPEGWK IM(83.31)EFTTTLLNTSPEGWK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 992.493 2 992.490241 1982.96593 60687.32 0.3932 0.00039025 0.27961 0.00027751 0.67281 0.00066775 992.991770136272 996.498033826853 112.55 0.30286 112.55 112.37 112.67 0 57 20 4 0 0 0 1.0648E-05 2 71027 83.314 77.93 1 0.99908 1.0009 0 9829500 5380400 4449000 17383 1665 6567 6722 27199;27200 27199 1450 IMEFTTTLLNTSPEGWK 17 1 0 Oxidation (M) _IM(ox)EFTTTLLNTSPEGWK_ IM(1)EFTTTLLNTSPEGWK IM(72.96)EFTTTLLNTSPEGWK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 992.9929 2 992.490241 1982.96593 59665.78 0.78001 0.00077415 0.59963 0.00059513 1.3796 0.0013693 992.992582025087 996.497629127845 111.95 0.48594 111.95 111.77 112.26 -7.6294E-06 81 36 4 0 0 0 3.233E-05 2 72423 72.958 69.92 1 0.88502 0.89528 0 8977300 4136600 4840700 17384 1665 6567 6722 27201;27202 27202 1450 IMEGPAFNFLDAPAVR 16 0 1 Oxidation (M) _IM(ox)EGPAFNFLDAPAVR_ IM(1)EGPAFNFLDAPAVR IM(96.64)EGPAFNFLDAPAVR 0 1 0 P11177 P11177 P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.4479 2 882.442897 1762.87124 NaN NaN NaN -0.59028 -0.00052089 NaN NaN NaN NaN 114.04 0.51466 114.04 113.76 114.27 0 0 0 0 4.6961E-09 1 74101 96.64 72.349 1 NaN NaN 0 5179300 0 5179300 17385 1468 6568 6723 27203 27203 1182 IMENSGIQMVSK 12 1 0 2 Oxidation (M) _IM(ox)ENSGIQM(ox)VSK_ IM(1)ENSGIQM(1)VSK IM(55.4)ENSGIQM(55.4)VSK 0 2 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.8365 2 684.82852 1367.64249 NaN NaN NaN 1.1691 0.00080062 NaN NaN NaN NaN 28.869 0.29177 28.869 28.65 28.942 -1.9073E-06 0 0 0 0.0017322 1 13755 55.401 18.976 1 NaN NaN 0 1883800 0 1883800 17386 1984 6569 6724 27204 27204 1817;1818 IMENSGIQMVSK 12 1 0 2 Oxidation (M) _IM(ox)ENSGIQM(ox)VSK_ IM(1)ENSGIQM(1)VSK IM(50.11)ENSGIQM(50.11)VSK 0 2 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8369 2 684.82852 1367.64249 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.062 1 28.062 27.562 28.562 0 0 0 0 0.017944 1 13275 50.108 24.486 1 17387 1984 6569 6724 27205 27205 1817;1818 IMFVLPR 7 0 1 Oxidation (M) _IM(ox)FVLPR_ IM(1)FVLPR IM(48.24)FVLPR 0 1 0 REV__Q969S9 REV__Q969S9 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.262 2 446.259674 890.504795 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.77 1 112.77 112.27 113.27 0 0 0 0 0.048728 1 73043 48.242 20.925 1 + 17388 2159 6570 6725 27206 27206 2004 IMGGASANEMLLSGR 15 0 1 2 Oxidation (M) _IM(ox)GGASANEM(ox)LLSGR_ IM(1)GGASANEM(1)LLSGR IM(73.27)GGASANEM(73.27)LLSGR 0 2 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.8691 2 769.868708 1537.72286 NaN NaN NaN -0.21002 -0.00016169 NaN NaN NaN NaN 51.341 0.33294 51.341 51.132 51.464 0 0 0 0 7.8667E-05 1 28378 73.273 65.895 1 NaN NaN 0 5043900 5043900 0 17389 2121 6571 6726 27207 27207 1948;1949 IMGGASANEMLLSGR 15 0 1 2 Oxidation (M) _IM(ox)GGASANEM(ox)LLSGR_ IM(1)GGASANEM(1)LLSGR IM(46.07)GGASANEM(46.07)LLSGR 0 2 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.8735 2 769.868708 1537.72286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.897 1 50.897 50.397 51.397 0 0 0 0 0.0094333 1 28131 46.069 27.801 1 17390 2121 6571 6726 27208 27208 1948;1949 IMGGASANEMLLSGR 15 0 1 2 Oxidation (M) _IM(ox)GGASANEM(ox)LLSGR_ IM(1)GGASANEM(1)LLSGR IM(44.3)GGASANEM(44.3)LLSGR 0 2 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.8707 2 769.868708 1537.72286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.018 1 51.018 50.518 51.518 0 0 0 0 0.012833 1 28208 44.299 17.626 1 17391 2121 6571 6726 27209 27209 1948;1949 IMGGASANEMLLSGR 15 0 1 2 Oxidation (M) _IM(ox)GGASANEM(ox)LLSGR_ IM(1)GGASANEM(1)LLSGR IM(44.62)GGASANEM(44.62)LLSGR 0 2 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.8694 2 769.868708 1537.72286 69250.59 0.67386 0.00051878 -0.32953 -0.00025369 0.34433 0.00026509 769.868494809787 774.87269474561 50.358 0.63848 50.358 49.863 50.502 0 226 57 6 0 0 0 0.0030377 1 28274 44.616 44.616 1 2.0513 2.2437 0 34409000 13097000 21312000 17392 2121 6571 6726 27210 27210 1948;1949 IMGIPEEEQMGLLR 14 0 1 2 Oxidation (M) _IM(ox)GIPEEEQM(ox)GLLR_ IM(1)GIPEEEQM(1)GLLR IM(57.53)GIPEEEQM(57.53)GLLR 0 2 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.4118 2 824.407666 1646.80078 71426.02 0.63473 0.00052328 -0.57196 -0.00047153 0.062776 5.1753E-05 824.40726211433 829.411442722789 83.414 0.9104 83.414 82.816 83.727 0 278 77 7 0 0 0 0.0010749 1 49953 57.532 57.532 1 4.1932 4.2895 0 34316000 6434600 27881000 17393 81 6572 6727 27211 27211 59;60 IMGPNYTPGK 10 1 0 Oxidation (M) _IM(ox)GPNYTPGK_ IM(1)GPNYTPGK IM(56.92)GPNYTPGK 0 1 0 P13639;Q8TA90;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.2796 2 547.270967 1092.52738 NaN NaN NaN 0.56449 0.00030893 NaN NaN NaN NaN 31.308 0.90037 31.308 30.871 31.771 0 0 0 0 0.0050497 2 15594 56.916 29.954 1 NaN NaN 0 13001000 0 13001000 17394 1478 6573 6728 27212;27213 27212 1229 IMGPNYTPGK 10 1 0 Oxidation (M) _IM(ox)GPNYTPGK_ IM(1)GPNYTPGK IM(60.05)GPNYTPGK 0 1 0 P13639;Q8TA90;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.2806 2 547.270967 1092.52738 83928.88 0.5071 0.00027752 0.62488 0.00034198 1.132 0.0006195 547.27130419003 551.278516541461 30.786 0.86726 30.786 30.341 31.208 0 175 74 5 0 0 0 0.0026731 2 15237 60.045 36.522 1 4.1744 4.5146 0 21983000 6905400 15078000 17395 1478 6573 6728 27214;27215 27215 1229 IMGVLTHLDSFK 12 1 0 Oxidation (M) _IM(ox)GVLTHLDSFK_ IM(1)GVLTHLDSFK IM(68.52)GVLTHLDSFK 0 1 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.2512 3 459.579601 1375.71697 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.655 1 78.655 78.155 79.155 0 0 0 0 0.00042479 1 47718 68.515 47.12 1 17396 1742 6574 6729 27216 27216 1588 IMIMTDQDQDGSHIK 15 1 0 2 Oxidation (M) _IM(ox)IM(ox)TDQDQDGSHIK_ IM(1)IM(1)TDQDQDGSHIK IM(164.81)IM(164.81)TDQDQDGSHIK 0 2 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.408 2 882.400569 1762.78658 65348.26 1.1715 0.0010337 -0.35986 -0.00031754 0.81161 0.00071617 882.901949215597 886.407581641198 33.443 0.56257 33.443 33.072 33.634 0 187 54 6 0 0 0 2.9045E-38 3 16489 164.81 164.81 1 1.8314 1.9984 0 50351000 19089000 31262000 17397 1471;1679 6575 6730 27217;27218;27219 27217 1200;1201 IMIMTDQDQDGSHIK 15 1 0 2 Oxidation (M) _IM(ox)IM(ox)TDQDQDGSHIK_ IM(1)IM(1)TDQDQDGSHIK IM(168.93)IM(168.93)TDQDQDGSHIK 0 2 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.6038 3 588.602805 1762.78658 78283.84 0.89321 0.00052574 -0.67154 -0.00039527 0.22167 0.00013047 588.60263980451 591.273866524522 33.6 1.092 33.6 33.006 34.098 0 772 106 9 0 0 0 6.708E-39 2 16523 168.93 168.93 1 1.6487 1.864 0 145440000 59296000 86144000 17398 1471;1679 6575 6730 27220;27221 27221 1200;1201 IMIMTDQDQDGSHIK 15 1 0 2 Oxidation (M) _IM(ox)IM(ox)TDQDQDGSHIK_ IM(1)IM(1)TDQDQDGSHIK IM(111.52)IM(111.52)TDQDQDGSHIK 0 2 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.4068 2 882.400569 1762.78658 64900.15 0.62433 0.00055091 -0.39092 -0.00034495 0.23341 0.00020596 882.400443642369 886.40756625343 33.78 0.30282 33.78 33.634 33.937 -3.8147E-06 109 29 6 0 0 0 6.8365E-08 1 16903 111.52 111.52 1 1.5497 1.6751 0 35434000 13452000 21981000 17399 1471;1679 6575 6730 27222 27222 1200;1201 IMIMTDQDQDGSHIK 15 1 0 2 Oxidation (M) _IM(ox)IM(ox)TDQDQDGSHIK_ IM(1)IM(1)TDQDQDGSHIK IM(142.08)IM(142.08)TDQDQDGSHIK 0 2 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.3998 2 882.400569 1762.78658 64972.49 0.75989 0.00067053 -0.20442 -0.00018038 0.55548 0.00049015 882.400388811271 886.407724103121 32.528 0.28336 32.528 32.352 32.635 0 94 26 6 0 0 0 8.0344E-22 3 16201 142.08 142.08 1 1.6503 1.8299 0 47672000 18060000 29613000 17400 1471;1679 6575 6730 27223;27224;27225 27225 1200;1201 IMIMTDQDQDGSHIK 15 1 0 2 Oxidation (M) _IM(ox)IM(ox)TDQDQDGSHIK_ IM(1)IM(1)TDQDQDGSHIK IM(169.4)IM(169.4)TDQDQDGSHIK 0 2 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.2734 3 588.602805 1762.78658 75829.88 0.89919 0.00052927 -0.89148 -0.00052473 0.0077085 4.5372E-06 588.93706910267 591.273552574109 32.518 0.41879 32.518 32.316 32.735 0 215 38 9 0 0 0 6.253E-39 1 16126 169.4 169.4 1 1.8247 2.0718 0 141660000 38573000 103090000 17401 1471;1679 6575 6730 27226 27226 1200;1201 IMIMTDQDQDGSHIK 15 1 0 2 Oxidation (M) _IM(ox)IM(ox)TDQDQDGSHIK_ IM(1)IM(1)TDQDQDGSHIK IM(45.83)IM(45.83)TDQDQDGSHIK 0 2 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.6039 3 588.602805 1762.78658 76083.17 0.52235 0.00030746 -0.58115 -0.00034207 -0.0588 -3.461E-05 588.937098245553 591.27391792215 32.85 1.104 32.85 32.326 33.43 0 568 101 10 0 0 0 0.00093261 1 16152 45.825 45.825 1 1.6408 1.8938 0 190510000 82007000 108500000 17402 1471;1679 6575 6730 27227 27227 1200;1201 IMIMTDQDQDGSHIK 15 1 0 2 Oxidation (M) _IM(ox)IM(ox)TDQDQDGSHIK_ IM(1)IM(1)TDQDQDGSHIK IM(98.69)IM(98.69)TDQDQDGSHIK 0 2 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.6031 3 588.602805 1762.78658 77072.68 0.4303 0.00025328 -0.30876 -0.00018174 0.12154 7.1536E-05 588.602790136149 591.274009894731 38.631 1.0945 38.631 38.162 39.257 0 535 84 10 0 0 0 1.0698E-06 2 17529 98.694 95.458 1 0.63134 0.50443 0 20334000 12450000 7883900 17403 1471;1679 6575 6730 27228;27229 27228 1200;1201 IMIMTDQDQDGSHIK 15 1 0 2 Oxidation (M) _IM(ox)IM(ox)TDQDQDGSHIK_ IM(1)IM(1)TDQDQDGSHIK IM(65.22)IM(65.22)TDQDQDGSHIK 0 2 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.6031 3 588.602805 1762.78658 77649.08 0.2767 0.00016287 -0.31493 -0.00018537 -0.038229 -2.2502E-05 588.602847428341 591.273906363417 38.807 1.2681 38.807 38.346 39.614 -3.8147E-06 537 97 8 0 0 0 9.7288E-05 1 17136 65.219 64.186 1 0.60958 0.4896 0 15240000 9583600 5656500 17404 1471;1679 6575 6730 27230 27230 1200;1201 IMIMTDQDQDGSHIK 15 1 0 Oxidation (M) _IMIM(ox)TDQDQDGSHIK_ IMIM(1)TDQDQDGSHIK IM(-34.29)IM(34.29)TDQDQDGSHIK 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.9429 3 583.271166 1746.79167 78933.03 0.44627 0.0002603 -0.32116 -0.00018732 0.12512 7.2978E-05 583.27116021873 585.942512183912 45.525 0.48598 45.525 45.295 45.781 3.8147E-06 203 36 8 0 0 0 5.6001E-05 2 21751 65.374 65.374 2 1.1026 0.87072 0 6028900 2520600 3508300 17405 1471;1679 6575 6731 27231;27232 27231 1200;1201 IMIMTDQDQDGSHIK 15 1 0 Oxidation (M) _IMIM(ox)TDQDQDGSHIK_ IM(0.002)IM(0.998)TDQDQDGSHIK IM(-27.36)IM(27.36)TDQDQDGSHIK 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.9426 3 583.271166 1746.79167 79156.76 0.51606 0.000301 -0.40045 -0.00023357 0.11561 6.743E-05 583.271161630536 586.276607950032 45.752 0.46418 45.752 45.479 45.944 0 195 28 9 0 0 0 0.00016978 1 21322 52.522 52.522 2 1.215 0.99387 0 4805000 2179200 2625700 17406 1471;1679 6575 6731 27233 27233 1200;1201 IMIMTDQDQDGSHIK 15 1 0 Oxidation (M) _IM(ox)IMTDQDQDGSHIK_ IM(0.99)IM(0.01)TDQDQDGSHIK IM(19.86)IM(-19.86)TDQDQDGSHIK 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.9429 3 583.271166 1746.79167 77992.76 0.32792 0.00019127 0.23673 0.00013808 0.56465 0.00032935 583.271888519603 585.942645530982 53.424 1.0276 53.424 53.011 54.038 0 381 72 8 0 0 0 0.00017869 1 25826 51.771 51.771 2 1.4094 1.1508 0 8029900 3784800 4245100 17407 1471;1679 6575 6731 27234 27234 1200;1201 IMIMTDQDQDGSHIK 15 1 0 Unmodified _IMIMTDQDQDGSHIK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.611 3 577.939528 1730.79676 79076.73 0.42086 0.00024323 0.32246 0.00018636 0.74332 0.00042959 578.274832336684 580.945197291634 61.655 0.68235 61.655 61.402 62.085 0 243 55 6 0 0 0 0.0014587 2 31639 38.376 38.376 1 1.3332 1.0483 0 11146000 4048800 7097000 17408 1471;1679 6575 6732 27235;27236 27235 IMIPLK 6 1 0 Oxidation (M) _IM(ox)IPLK_ IM(1)IPLK IM(55.46)IPLK 0 1 0 B4DQI7;A8K4I8;Q9BPW8;O75323 B4DQI7 B4DQI7 NIPSNAP1;GBAS Protein NipSnap homolog 1;Protein NipSnap homolog 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 369.7369 2 365.730218 729.445883 NaN NaN NaN -0.36756 -0.00013443 NaN NaN NaN NaN 65.308 0.37921 65.308 65.084 65.463 0 0 0 0 0.025536 1 38490 55.457 36.772 1 NaN NaN 0 3445900 0 3445900 17409 735 6576 6733 27237 27237 572 IMLFTNEDNPHGNDSAK 17 1 0 Oxidation (M) _IM(ox)LFTNEDNPHGNDSAK_ IM(1)LFTNEDNPHGNDSAK IM(117.4)LFTNEDNPHGNDSAK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.293 3 640.291507 1917.85269 74461.83 0.38387 0.00024579 -0.12073 -7.7304E-05 0.26314 0.00016849 640.625830934213 642.962821772331 50.439 1.0433 50.439 49.992 51.036 0 541 98 9 0 0 0 3.2193E-13 2 27629 117.4 117.4 1 0.6249 0.70681 0 147950000 90888000 57060000 17410 82 6577 6734 27238;27239 27238 80 IMLFTNEDNPHGNDSAK 17 1 0 Oxidation (M) _IM(ox)LFTNEDNPHGNDSAK_ IM(1)LFTNEDNPHGNDSAK IM(59.18)LFTNEDNPHGNDSAK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 959.935 2 959.933622 1917.85269 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.177 1 50.177 49.677 50.677 0 0 0 0 0.00025371 1 27680 59.185 45.757 1 17411 82 6577 6734 27240 27240 80 IMLFTNEDNPHGNDSAK 17 1 0 Oxidation (M) _IM(ox)LFTNEDNPHGNDSAK_ IM(1)LFTNEDNPHGNDSAK IM(104.2)LFTNEDNPHGNDSAK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.9635 3 640.291507 1917.85269 74300.3 0.45461 0.00029108 0.061154 3.9157E-05 0.51577 0.00033024 640.625974498255 642.963030850578 49.019 1.0419 49.019 48.613 49.655 0 602 86 10 0 0 0 1.2186E-09 3 27393 104.2 104.2 1 0.62649 0.70353 0 116460000 68625000 47833000 17412 82 6577 6734 27241;27242;27243 27242 80 IMLFTNEDNPHGNDSAK 17 1 0 Oxidation (M) _IM(ox)LFTNEDNPHGNDSAK_ IM(1)LFTNEDNPHGNDSAK IM(40.52)LFTNEDNPHGNDSAK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.6255 3 640.291507 1917.85269 77039.86 0.51612 0.00033047 0.089949 5.7594E-05 0.60607 0.00038806 640.291431151668 642.962926337613 68.179 0.35139 68.179 68.022 68.373 0 69 23 6 0 0 0 0.000376 1 35580 40.52 40.52 1 0.4694 0.39537 0 2126700 1605000 521750 17413 82 6577 6734 27244 27244 80 IMLFTNEDNPHGNDSAK 17 1 0 Oxidation (M) _IM(ox)LFTNEDNPHGNDSAK_ IM(1)LFTNEDNPHGNDSAK IM(41.41)LFTNEDNPHGNDSAK 0 1 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.9628 3 640.291507 1917.85269 75630.04 0.51201 0.00032783 -0.3562 -0.00022807 0.1558 9.976E-05 640.625706746182 642.962618183835 58.689 0.7574 58.689 58.215 58.972 0 331 59 8 0 0 0 0.00034384 1 29229 41.412 41.412 1 0.19536 0.15904 0 6904300 5965300 939000 17414 82 6577 6734 27245 27245 80 IMLFTNEDNPHGNDSAK 17 1 0 Unmodified _IMLFTNEDNPHGNDSAK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.9593 3 634.959868 1901.85778 75795.41 0.46163 0.00029311 -0.24443 -0.0001552 0.2172 0.00013791 634.959689290991 637.631389450637 68.208 0.4687 68.208 67.997 68.465 0 168 32 9 0 0 0 5.7067E-13 3 35587 109.35 109.35 1 0.34105 0.26874 0 5836800 4334800 1501900 17415 82 6577 6735 27246;27247;27248 27246 IMLFTNEDNPHGNDSAK 17 1 0 Unmodified _IMLFTNEDNPHGNDSAK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.9658 3 634.959868 1901.85778 76823.45 0.5109 0.0003244 -0.033918 -2.1536E-05 0.47698 0.00030287 635.294090671796 637.631292597063 68.516 0.55075 68.516 68.336 68.887 0 165 37 7 0 0 0 4.0245E-05 2 35008 56.851 56.851 1 0.35367 0.28842 0 5754500 3924500 1830100 17416 82 6577 6735 27249;27250 27250 IMLPGVLR 8 0 1 Oxidation (M) _IM(ox)LPGVLR_ IM(1)LPGVLR IM(57.46)LPGVLR 0 1 0 O60832;H7C2Q2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.7783 2 457.778231 913.541908 88862.92 0.3195 0.00014626 1.2929 0.00059184 1.6124 0.0007381 457.779025243054 462.782871384691 88.947 1.053 88.947 88.47 89.523 0 235 88 4 0 0 0 0.010656 2 54651 57.463 41.31 1 0.87521 0.9275 0 23801000 13075000 10726000 17417 1398 6578 6736 27251;27252 27251 1074 IMLPWDPTGK 10 1 0 Unmodified _IMLPWDPTGK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.3121 2 579.30481 1156.59507 81274.65 0.49597 0.00028732 0.23804 0.0001379 0.73401 0.00042522 579.80658686146 583.31207879999 120.2 0.61575 120.2 119.79 120.4 7.6294E-06 69 27 4 0 0 0 0.035164 2 71243 40.724 40.724 1 1.0036 0.82231 0 2470000 996060 1474000 17418 1511 6579 6737 27253;27254 27253 IMLPWDPTGK 10 1 0 Unmodified _IMLPWDPTGK_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.3046 2 579.30481 1156.59507 81742.98 0.66017 0.00038244 0.0022937 1.3287E-06 0.66247 0.00038377 579.304748734042 583.311817540151 119.95 0.49271 119.95 119.72 120.22 0 67 20 6 0 0 0 0.036089 1 70293 40.352 40.352 1 1.1884 0.98947 0 1552700 750850 801860 17419 1511 6579 6737 27255 27255 IMNTFSVMPSPK 12 1 0 2 Oxidation (M) _IM(ox)NTFSVM(ox)PSPK_ IM(1)NTFSVM(1)PSPK IM(52.39)NTFSVM(52.39)PSPK 0 2 0 Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A1L196;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386;K7ES63 Q13885;Q9BUF5 Q13885 TUBB2A;TUBB2B;DKFZp566F223;TUBB6 Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.3438 2 692.335981 1382.65741 NaN NaN NaN 0.42187 0.00029208 NaN NaN NaN NaN 54.348 0.3378 54.348 54.232 54.57 0 0 0 0 0.0031885 1 31024 52.391 41.226 1 NaN NaN 0 2812800 0 2812800 17420 1723;2004 6580 6738 27256 27256 1558;1559 IMNTFSVVPSPK 12 1 0 Oxidation (M) _IM(ox)NTFSVVPSPK_ IM(1)NTFSVVPSPK IM(133.81)NTFSVVPSPK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0R2D3;M0R042;M0QYM7;P04350;B4DE77;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;M0R042;P04350;Q9BV28 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3605 2 668.352488 1334.69042 71670.6 0.50034 0.00033441 -0.17937 -0.00011988 0.32097 0.00021452 668.352577006261 672.359554958389 77.221 1.4312 77.221 76.596 78.027 0 751 118 10 0 0 0 3.0323E-13 4 45350 133.81 104.06 1 2.1697 2.547 0 304460000 94895000 209560000 17421 1452;1660;1441;502;1353 6581 6739 27257;27258;27259;27260 27259 348 IMNTFSVVPSPK 12 1 0 Oxidation (M) _IM(ox)NTFSVVPSPK_ IM(1)NTFSVVPSPK IM(116.77)NTFSVVPSPK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0R2D3;M0R042;M0QYM7;P04350;B4DE77;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;M0R042;P04350;Q9BV28 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3593 2 668.352488 1334.69042 70653.02 0.29384 0.00019639 0.1074 7.1784E-05 0.40124 0.00026817 668.352777924716 672.359721628592 76.207 1.474 76.207 75.581 77.055 0 732 124 10 0 0 0 1.8528E-08 2 45692 116.77 89.437 1 2.1333 2.5102 0 380260000 124390000 255870000 17422 1452;1660;1441;502;1353 6581 6739 27261;27262 27261 348 IMNTFSVVPSPK 12 1 0 Oxidation (M) _IM(ox)NTFSVVPSPK_ IM(1)NTFSVVPSPK IM(46.8)NTFSVVPSPK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0R2D3;M0R042;M0QYM7;P04350;B4DE77;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;M0R042;P04350;Q9BV28 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.3599 2 668.352488 1334.69042 73690.8 0.66261 0.00044286 -0.2122 -0.00014182 0.45041 0.00030104 668.352519358859 672.359575419366 88.053 1.2634 88.053 87.605 88.869 0 382 78 7 0 0 0 0.004792 1 48358 46.796 43.033 1 0.85795 0.66953 0 12062000 6433500 5628100 17423 1452;1660;1441;502;1353 6581 6739 27263 27263 348 IMNTFSVVPSPK 12 1 0 Oxidation (M) _IM(ox)NTFSVVPSPK_ IM(1)NTFSVVPSPK IM(62.63)NTFSVVPSPK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0R2D3;M0R042;M0QYM7;P04350;B4DE77;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;M0R042;P04350;Q9BV28 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.3534 2 668.352488 1334.69042 73803.44 0.50386 0.00033675 -0.095185 -6.3617E-05 0.40867 0.00027314 668.352593087719 672.359738586041 88.139 1.1174 88.139 87.631 88.748 0 362 64 8 0 0 0 0.00048539 2 47546 62.633 45.607 1 0.83633 0.6904 0 11333000 5608100 5725200 17424 1452;1660;1441;502;1353 6581 6739 27264;27265 27265 348 IMNTFSVVPSPK 12 1 0 Unmodified _IMNTFSVVPSPK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0R2D3;M0R042;M0QYM7;P04350;B4DE77;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;M0R042;P04350;Q9BV28 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.3637 2 660.355031 1318.69551 NaN NaN NaN 0.31787 0.00020991 NaN NaN NaN NaN 89.323 0.43019 89.323 89.133 89.563 -7.6294E-06 0 0 0 5.6381E-06 1 53978 104.43 72.216 1 NaN NaN 0 5967000 0 5967000 17425 1452;1660;1441;502;1353 6581 6740 27266 27266 IMNTFSVVPSPK 12 1 0 Unmodified _IMNTFSVVPSPK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0R2D3;M0R042;M0QYM7;P04350;B4DE77;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;M0R042;P04350;Q9BV28 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8642 2 660.355031 1318.69551 76684.3 0.43188 0.00028519 -0.03052 -2.0154E-05 0.40136 0.00026504 660.354884956432 664.36209108505 88.421 0.40179 88.421 88.219 88.621 0 92 36 4 0 0 0 2.8899E-09 3 54520 124.67 94.056 1 0.97659 0.98768 0 28857000 14484000 14372000 17426 1452;1660;1441;502;1353 6581 6740 27267;27268;27269 27268 IMNTFSVVPSPK 12 1 0 Unmodified _IMNTFSVVPSPK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0R2D3;M0R042;M0QYM7;P04350;B4DE77;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;M0R042;P04350;Q9BV28 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.3558 2 660.355031 1318.69551 75847.88 0.55042 0.00036347 -0.13383 -8.8373E-05 0.41659 0.0002751 660.354876026482 664.362115740872 102.08 0.73598 102.08 101.74 102.47 0 214 53 6 0 0 0 0.00021804 2 57877 82.417 62.655 1 1.633 1.3034 0 9330000 3398300 5931700 17427 1452;1660;1441;502;1353 6581 6740 27270;27271 27271 IMNTFSVVPSPK 12 1 0 Unmodified _IMNTFSVVPSPK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;G3V2A3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0R2D3;M0R042;M0QYM7;P04350;B4DE77;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q5JP53;Q8IZ29;M0R042;P04350;Q9BV28 Q5JP53 TUBB;XTP3TPATP1;TUBB3;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 660.3549 2 660.355031 1318.69551 75815.8 0.49184 0.00032479 0.1466 9.6806E-05 0.63844 0.00042159 660.355113244394 664.362402192821 101.9 0.61917 101.9 101.58 102.2 0 223 48 6 0 0 0 0.00012005 3 56872 94.616 75.871 1 1.5008 1.2302 0 8764600 4031700 4732900 17428 1452;1660;1441;502;1353 6581 6740 27272;27273;27274 27273 IMPEDIIINCSK 12 1 0 Oxidation (M) _IM(ox)PEDIIINCSK_ IM(1)PEDIIINCSK IM(59.54)PEDIIINCSK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 724.8597 2 724.85982 1447.70509 69806.23 0.91078 0.00066019 -0.78351 -0.00056793 0.12727 9.2255E-05 724.859238631063 729.367964190502 95.88 1.0631 95.88 95.508 96.572 0 360 70 9 0 0 0 0.0010005 2 53757 59.542 45.335 1 1.1761 0.93746 0 19823000 8632900 11190000 17429 1470 6582 6741 27275;27276 27276 1187 IMPEDIIINCSK 12 1 0 Oxidation (M) _IM(ox)PEDIIINCSK_ IM(1)PEDIIINCSK IM(72.2)PEDIIINCSK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.8594 2 724.85982 1447.70509 70288.25 0.52061 0.00037737 -0.72993 -0.00052909 -0.20931 -0.00015172 724.859543918192 729.368029602429 95.819 0.91436 95.819 95.484 96.399 -7.6294E-06 329 59 11 0 0 0 0.0001725 2 52975 72.2 45.086 1 1.1509 0.92386 0 18080000 7941300 10139000 17430 1470 6582 6741 27277;27278 27278 1187 IMPEDIIINCSK 12 1 0 Oxidation (M) _IM(ox)PEDIIINCSK_ IM(1)PEDIIINCSK IM(57.53)PEDIIINCSK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.868 2 724.85982 1447.70509 NaN NaN NaN -0.40688 -0.00029493 NaN NaN NaN NaN 96.89 0.70782 96.89 96.503 97.21 0 0 0 0 0.0024846 1 53581 57.532 39.22 1 NaN NaN 0 8564500 0 8564500 17431 1470 6582 6741 27279 27279 1187 IMPEDIIINCSK 12 1 0 Oxidation (M) _IM(ox)PEDIIINCSK_ IM(1)PEDIIINCSK IM(41.4)PEDIIINCSK 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.8678 2 724.85982 1447.70509 NaN NaN NaN 0.1421 0.000103 NaN NaN NaN NaN 107.7 0.64649 107.7 107.38 108.03 0 0 0 0 0.01665 1 60715 41.399 31.712 1 NaN NaN 0 2197400 0 2197400 17432 1470 6582 6741 27280 27280 1187 IMPEDIIINCSK 12 1 0 Unmodified _IMPEDIIINCSK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.8705 2 716.862363 1431.71017 69657.94 0.83138 0.00059598 0.20959 0.00015025 1.041 0.00074623 716.862331802165 720.869955967936 107.76 0.7113 107.76 107.45 108.16 -7.6294E-06 234 40 8 0 0 0 0.0024048 2 61760 58.676 47.457 1 1.87 1.45 0 12895000 5388200 7507300 17433 1470 6582 6742 27281;27282 27282 IMPEDIIINCSK 12 1 0 Unmodified _IMPEDIIINCSK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 716.8627 2 716.862363 1431.71017 70929.44 0.70071 0.00050231 0.22318 0.00015999 0.92389 0.00066231 716.862393188724 720.869941412246 107.64 0.8084 107.64 107.37 108.18 0 273 46 8 0 0 0 0.0020652 2 60791 59.542 49.018 1 1.9236 1.5725 0 12649000 4496500 8152800 17434 1470 6582 6742 27283;27284 27283 IMRPTDVPDQGLLCDLLWSDPDK 23 1 1 Oxidation (M) _IM(ox)RPTDVPDQGLLCDLLWSDPDK_ IM(1)RPTDVPDQGLLCDLLWSDPDK IM(50.83)RPTDVPDQGLLCDLLWSDPDK 0 1 1 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3 P62136;A0A024RBP2 P62136 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.1135 3 900.771772 2699.29349 65528.74 0.96012 0.00086485 -0.26028 -0.00023445 0.69984 0.0006304 901.43940692453 907.113631390455 121.45 0.4946 121.45 121.24 121.73 7.6294E-06 167 31 9 0 0 0 4.2559E-08 2 78570 50.827 48.32 1 1.3686 1.4956 0 16644000 6332400 10311000 17435 1632;343 6583 6743 27285;27286 27286 256 IMRPTDVPDQGLLCDLLWSDPDK 23 1 1 Oxidation (M) _IM(ox)RPTDVPDQGLLCDLLWSDPDK_ IM(1)RPTDVPDQGLLCDLLWSDPDK IM(67.41)RPTDVPDQGLLCDLLWSDPDK 0 1 1 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;B4DNE3 P62136;A0A024RBP2 P62136 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 906.7806 3 900.771772 2699.29349 64909.11 0.70622 0.00063614 0.5773 0.00052002 1.2835 0.0011562 901.106013055538 907.114250209135 120.97 0.48425 120.97 120.74 121.23 0 122 28 6 0 0 0 3.1164E-09 1 80042 67.413 63.845 1 1.574 1.7896 0 18515000 7159000 11356000 17436 1632;343 6583 6743 27287 27287 256 IMSSPLSK 8 1 0 Oxidation (M) _IM(ox)SSPLSK_ IM(1)SSPLSK IM(107.29)SSPLSK 0 1 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;J3KSS0;E5RIT6;Q9UNX3;E5RHH1 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.743 2 439.736228 877.457904 91295.66 -0.21292 -9.3627E-05 0.3818 0.00016789 0.16888 7.4264E-05 439.736317847674 443.743323012776 24.634 0.55234 24.634 24.314 24.867 1.9073E-06 100 22 8 0 0 0 0.00078631 2 10305 107.29 58.539 1 1.2805 1.4472 0 143370000 59670000 83697000 17437 1629;1214 6584 6744 27288;27289 27288 927 IMSSPLSK 8 1 0 Oxidation (M) _IM(ox)SSPLSK_ IM(1)SSPLSK IM(125.58)SSPLSK 0 1 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;J3KSS0;E5RIT6;Q9UNX3;E5RHH1 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.7433 2 439.736228 877.457904 90474.03 -0.049708 -2.1858E-05 0.15681 6.8955E-05 0.1071 4.7097E-05 439.736195845489 443.743241568132 24.395 0.45912 24.395 24.196 24.655 0 88 20 6 0 0 0 0.00044875 2 10099 125.58 68.407 1 1.3437 1.5357 0 157720000 66060000 91661000 17438 1629;1214 6584 6744 27290;27291 27290 927 IMVANIEEVLQR 12 0 1 Oxidation (M) _IM(ox)VANIEEVLQR_ IM(1)VANIEEVLQR IM(61.35)VANIEEVLQR 0 1 0 O75396;A0A087X1A9 O75396 O75396 SEC22B Vesicle-trafficking protein SEC22b ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.8926 2 715.887226 1429.7599 NaN NaN NaN -0.21129 -0.00015126 NaN NaN NaN NaN 105.66 0.73602 105.66 105.39 106.13 0 0 0 0 0.0018307 1 65428 61.353 41.567 1 NaN NaN 0 5339000 0 5339000 17439 1403 6585 6745 27292 27292 1081 IMVANIEEVLQR 12 0 1 Oxidation (M) _IM(ox)VANIEEVLQR_ IM(1)VANIEEVLQR IM(66.06)VANIEEVLQR 0 1 0 O75396;A0A087X1A9 O75396 O75396 SEC22B Vesicle-trafficking protein SEC22b MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.8923 2 715.887226 1429.7599 74715.95 0.8333 0.00059655 0.19069 0.00013652 1.024 0.00073306 715.88783102316 720.891351110505 105.14 0.78671 105.14 104.72 105.51 0 112 59 4 0 0 0 0.00037345 1 66581 66.056 59.453 1 2.419 2.4353 0 10805000 2359300 8445900 17440 1403 6585 6745 27293 27293 1081 INAVVETGR 9 0 1 Unmodified _INAVVETGR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.7693 2 479.769448 957.524344 90237.21 0.048714 2.3372E-05 0.19048 9.1389E-05 0.2392 0.00011476 479.769460902129 484.773726702502 30.799 0.45316 30.799 30.665 31.118 0 105 41 5 0 0 0 0.014576 1 15084 55.549 26.076 1 1.3988 1.4636 0 12874000 5205600 7668600 17441 415 6586 6746 27294 27294 INAVVETGR 9 0 1 Unmodified _INAVVETGR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.7694 2 479.769448 957.524344 89331.06 -0.11358 -5.4494E-05 -0.10383 -4.9816E-05 -0.21742 -0.00010431 479.769482811844 484.773519095293 30.231 0.34525 30.231 30.101 30.446 0 98 27 6 0 0 0 0.014576 1 14747 55.549 24.863 1 1.4756 1.479 0 18134000 9769300 8364900 17442 415 6586 6746 27295 27295 INAVVETGR 9 0 1 Unmodified _INAVVETGR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7737 2 479.769448 957.524344 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.581 1 30.581 30.081 31.081 0 0 0 0 0.0068692 1 15017 66.692 24.093 1 17443 415 6586 6746 27296 27296 INAVVETGRR 10 0 2 Unmodified _INAVVETGRR_ 0 0 1 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 378.888 3 372.215761 1113.62546 96854.22 0.36512 0.0001359 -0.25673 -9.5558E-05 0.10839 4.0346E-05 372.550547646123 378.887748349101 22.673 0.20657 22.673 22.563 22.77 0 24 8 4 0 0 0 0.013165 1 8633 35.908 12.682 1 2.5481 2.5028 0 4487600 983610 3504000 17444 415 6587 6747 27297 27297 INDALSCEYECR 12 0 1 Unmodified _INDALSCEYECR_ 0 0 0 Q52LJ0 Q52LJ0 Q52LJ0 FAM98B Protein FAM98B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.8276 2 765.32159 1528.62863 69797.52 0.75355 0.00057671 0.11146 8.53E-05 0.86501 0.00066201 765.32168273491 770.326027275401 49.283 0.44314 49.283 49.07 49.513 3.8147E-06 99 30 6 0 0 0 0.00018554 3 26941 77.062 74.908 1 1.1779 1.2041 0 18937000 7796500 11140000 17445 1782 6588 6748 27298;27299;27300 27299 INDALSCEYECR 12 0 1 Unmodified _INDALSCEYECR_ 0 0 0 Q52LJ0 Q52LJ0 Q52LJ0 FAM98B Protein FAM98B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.3274 2 765.32159 1528.62863 70371.83 0.94891 0.00072622 0.47685 0.00036495 1.4258 0.0010912 765.321502428727 770.326831981216 48.316 0.46611 48.316 48.039 48.505 0 68 31 4 0 0 0 0.00014175 1 26856 93.345 87.31 1 1.046 1.0412 0 7963500 3772300 4191200 17446 1782 6588 6748 27301 27301 INDRFEFPEQLPLDEFLQK 19 1 1 Unmodified _INDRFEFPEQLPLDEFLQK_ 0 0 1 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5;F5H2X1;B7Z842 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.7422 3 793.405747 2377.19541 68705.58 1.0194 0.00080877 0.22734 0.00018037 1.2467 0.00098915 793.740559875651 799.747643587781 126.29 1.078 126.29 125.68 126.76 0 358 80 6 0 0 0 0.0039307 1 81972 27.924 27.924 1 0.69921 0.75364 0 11145000 6433000 4712000 17447 1954 6589 6749 27302 27302 INDRFEFPEQLPLDEFLQK 19 1 1 Unmodified _INDRFEFPEQLPLDEFLQK_ 0 0 1 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5;F5H2X1;B7Z842 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.7407 3 793.405747 2377.19541 69123.69 1.0072 0.00079913 -0.018022 -1.4299E-05 0.9892 0.00078483 793.405853591072 799.747549816932 125.44 0.99316 125.44 125.07 126.06 0 307 66 7 0 0 0 1.7229E-05 2 83509 52.185 52.185 1 0.75798 0.84936 0 12386000 7382800 5003300 17448 1954 6589 6749 27303;27304 27304 INEAIVAVQAIIADPK 16 1 0 Unmodified _INEAIVAVQAIIADPK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.9838 2 832.982712 1663.95087 68349.15 0.91312 0.00076061 -0.28805 -0.00023994 0.62507 0.00052067 832.982505975308 836.989307457762 121.38 0.54086 121.38 121.08 121.62 7.6294E-06 184 35 8 0 0 0 6.8698E-05 2 78477 82.069 82.069 1 1.2674 1.2459 0 20083000 9709900 10373000 17449 1793 6590 6750 27305;27306 27306 INEAIVAVQAIIADPK 16 1 0 Unmodified _INEAIVAVQAIIADPK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.9904 2 832.982712 1663.95087 68401.42 0.98011 0.00081642 -0.16467 -0.00013716 0.81544 0.00067925 833.484310997614 836.989511117159 120.95 0.62927 120.95 120.58 121.21 7.6294E-06 162 39 7 0 0 0 5.1429E-05 2 79999 83.499 83.499 1 1.1122 1.1487 0 25011000 11557000 13454000 17450 1793 6590 6750 27307;27308 27308 INEAIVAVQAIIADPK 16 1 0 Unmodified _INEAIVAVQAIIADPK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.6747 2 832.982712 1663.95087 68450.42 1.1295 0.00094083 0.4701 0.00039159 1.5996 0.0013324 832.982456600353 837.492477985941 134.24 0.24419 134.24 134.1 134.35 0 54 11 6 0 0 0 0.038652 1 81879 35.487 29.642 1 1.4656 1.1583 0 5169600 2099800 3069800 17451 1793 6590 6750 27309 27309 INEAVECLLSLK 12 1 0 Unmodified _INEAVECLLSLK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.8833 2 694.876327 1387.7381 NaN NaN NaN -1.128 -0.00078386 NaN NaN NaN NaN 111.15 0.56547 111.15 110.87 111.43 0 0 0 0 4.5136E-05 1 69896 95.618 62.356 1 NaN NaN 0 6861400 0 6861400 17452 1454 6591 6751 27310 27310 INEAVECLLSLK 12 1 0 Unmodified _INEAVECLLSLK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.8845 2 694.876327 1387.7381 NaN NaN NaN 0.18197 0.00012645 NaN NaN NaN NaN 110.49 0.55939 110.49 110.22 110.78 7.6294E-06 0 0 0 2.1842E-13 2 71134 125.74 86.718 1 NaN NaN 0 8434500 0 8434500 17453 1454 6591 6751 27311;27312 27311 INEAVECLLSLK 12 1 0 Unmodified _INEAVECLLSLK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 698.8841 2 694.876327 1387.7381 75532.56 0.78458 0.00054519 0.41452 0.00028804 1.1991 0.00083322 694.876545716294 698.883531971929 122.79 0.74909 122.79 122.53 123.28 0 109 35 6 0 0 0 0.00047162 1 73302 70.488 70.488 1 1.2862 1.0392 0 2773100 1357500 1415600 17454 1454 6591 6751 27313 27313 INEAVECLLSLK 12 1 0 Unmodified _INEAVECLLSLK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 695.3792 2 694.876327 1387.7381 75416.59 0.84258 0.00058549 0.34677 0.00024096 1.1893 0.00082645 694.87656777212 698.883437614554 122.63 0.56606 122.63 122.42 122.99 0 93 27 5 0 0 0 0.0054119 2 72254 51.013 43.367 1 1.0916 0.86134 0 2026300 933640 1092700 17455 1454 6591 6751 27314;27315 27314 INEEISVK 8 1 0 Unmodified _INEEISVK_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0;M0QYZ0;M0QYM5;M0QYI8 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.2657 2 466.258382 930.502212 NaN NaN NaN 0.15826 7.3791E-05 NaN NaN NaN NaN 38.427 0.4622 38.427 38.218 38.68 0 0 0 0 0.0083865 1 19697 80.165 43.464 1 NaN NaN 0 18575000 0 18575000 17456 49 6592 6752 27316 27316 INEEISVK 8 1 0 Unmodified _INEEISVK_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0;M0QYZ0;M0QYM5;M0QYI8 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.2657 2 466.258382 930.502212 NaN NaN NaN 0.44705 0.00020844 NaN NaN NaN NaN 37.628 0.45685 37.628 37.35 37.807 0 0 0 0 0.049949 1 19472 49.96 22.436 1 NaN NaN 0 16943000 0 16943000 17457 49 6592 6752 27317 27317 INEILSNALK 10 1 0 Unmodified _INEILSNALK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4 P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.8345 2 557.826963 1113.63937 80785.38 0.56515 0.00031526 -0.44347 -0.00024738 0.12168 6.7875E-05 557.826835279493 561.833885628824 79.218 0.99934 79.218 78.875 79.874 0 406 90 7 0 0 0 4.984E-12 2 46997 144.66 103.02 1 1.3865 1.5652 0 79982000 32568000 47413000 17458 1599 6593 6753 27318;27319 27318 INEILSNALK 10 1 0 Unmodified _INEILSNALK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4 P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.8267 2 557.826963 1113.63937 81783.15 0.42267 0.00023578 -0.35021 -0.00019535 0.072467 4.0424E-05 557.826885179387 561.833935303693 78.108 0.89049 78.108 77.749 78.64 0 404 76 8 0 0 0 0.00021283 2 47365 93.649 71.563 1 1.3512 1.5113 0 108230000 45947000 62282000 17459 1599 6593 6753 27320;27321 27321 INEILSNALK 10 1 0 Unmodified _INEILSNALK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4 P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.8341 2 557.826963 1113.63937 81782.01 0.61879 0.00034518 -0.32534 -0.00018148 0.29345 0.00016369 557.826963571479 561.834067479562 90.636 1.1462 90.636 90.2 91.346 0 302 71 7 0 0 0 0.0022162 2 50195 70.1 49.866 1 0.98753 0.78559 0 9943800 4504600 5439200 17460 1599 6593 6753 27322;27323 27323 INEILSNALK 10 1 0 Unmodified _INEILSNALK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4 P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.8343 2 557.826963 1113.63937 82077.26 0.46726 0.00026065 -0.66571 -0.00037135 -0.19845 -0.0001107 557.826724250576 561.833923419467 90.488 0.99258 90.488 90.081 91.074 0 281 60 7 0 0 0 0.055405 2 49254 35.541 27.321 1 1.0503 0.86099 0 8787600 4059200 4728400 17461 1599 6593 6753 27324;27325 27324 INELIQGNMQR 11 0 1 Oxidation (M) _INELIQGNM(ox)QR_ INELIQGNM(1)QR INELIQGNM(47.19)QR 0 1 0 B3KRT9;H7BXF5;Q9H0E3 B3KRT9 B3KRT9 SAP130 Histone deacetylase complex subunit SAP130 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3433 2 666.340443 1330.66633 NaN NaN NaN -1.5007 -0.00099998 NaN NaN NaN NaN 38.503 0.33656 38.503 38.431 38.768 0 0 0 0 0.012497 1 19818 47.187 15.765 1 NaN NaN 0 3314300 3314300 0 17462 934 6594 6754 27326 27326 761 INELIQGNMQR 11 0 1 Oxidation (M) _INELIQGNM(ox)QR_ INELIQGNM(1)QR INELIQGNM(56.56)QR 0 1 0 B3KRT9;H7BXF5;Q9H0E3 B3KRT9 B3KRT9 SAP130 Histone deacetylase complex subunit SAP130 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3429 2 666.340443 1330.66633 NaN NaN NaN 1.0689 0.00071228 NaN NaN NaN NaN 37.545 0.28944 37.545 37.392 37.682 -3.8147E-06 0 0 0 0.0037458 1 19608 56.563 27.836 1 NaN NaN 0 2953000 2953000 0 17463 934 6594 6754 27327 27327 761 INELPTEETEIMIVQAK 17 1 0 Oxidation (M) _INELPTEETEIM(ox)IVQAK_ INELPTEETEIM(1)IVQAK INELPTEETEIM(40.77)IVQAK 0 1 0 O60885;A0A024R7H8;Q6PIS5;Q6NXE4;Q05BM2;Q5BJ26;M0QZD9 O60885 O60885 BRD4 Bromodomain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 992.0205 2 987.508631 1973.00271 64716.73 0.09329 9.2125E-05 1.294 0.0012779 1.3873 0.00137 988.011140223082 992.019023807205 97.63 0.3288 97.63 97.495 97.824 7.6294E-06 63 24 4 0 0 0 0.00070199 1 61011 40.767 40.767 1 0.85272 0.86003 0 7777900 4005200 3772700 17464 1399 6595 6755 27328 27328 1076 INELTGIK 8 1 0 Unmodified _INELTGIK_ 0 0 0 A0A140VK70;P35998;Q75L23;C9JLS9;B7Z571 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.2706 2 444.263468 886.512382 91267.8 -0.0069311 -3.0793E-06 0.5156 0.00022906 0.50867 0.00022598 444.263431184264 448.270784909276 45.031 0.65258 45.031 44.703 45.356 0 175 53 5 0 0 0 0.0028899 2 24608 98.523 43.952 1 2.3683 2.5088 0 35828000 7755000 28073000 17465 620 6596 6756 27329;27330 27329 INEWLTLVEK 10 1 0 Unmodified _INEWLTLVEK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8555 2 622.847896 1243.68124 NaN NaN NaN 0.31937 0.00019892 NaN NaN NaN NaN 108.1 0.35384 108.1 107.98 108.33 -7.6294E-06 0 0 0 0.020051 2 67629 54.608 35.337 1 NaN NaN 0 2714900 0 2714900 17466 1729 6597 6757 27331;27332 27332 INFDDNAEFR 10 0 1 Unmodified _INFDDNAEFR_ 0 0 0 A0A024R325;Q96I99;Q3ZCW5;E9PDQ8;B7Z2D5 A0A024R325 A0A024R325 SUCLG2 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.7869 2 620.783284 1239.55202 NaN NaN NaN -0.27021 -0.00016774 NaN NaN NaN NaN 69.11 0.60961 69.11 68.996 69.606 0 0 0 0 0.0034635 1 41148 76.465 56.678 1 NaN NaN 0 4319700 0 4319700 17467 126 6598 6758 27333 27333 INFLSNNQCENIR 13 0 1 Unmodified _INFLSNNQCENIR_ 0 0 0 B4E014;Q9UBD5;B7Z8A5;B7ZAI3;Q6IBJ0;B4DZ51 B4E014 B4E014 ORC3;ORC3L Origin recognition complex subunit 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.3909 2 811.391196 1620.76784 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.402 1 74.402 73.902 74.902 -7.6294E-06 0 0 0 0.0030136 1 43666 65.5 41.209 1 17468 1058 6599 6759 27334 27334 INFLSNNQCENIR 13 0 1 Unmodified _INFLSNNQCENIR_ 0 0 0 B4E014;Q9UBD5;B7Z8A5;B7ZAI3;Q6IBJ0;B4DZ51 B4E014 B4E014 ORC3;ORC3L Origin recognition complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.3919 2 811.391196 1620.76784 70044.04 0.5859 0.00047539 0.0092435 7.5001E-06 0.59514 0.00048289 811.391685088933 816.89673278127 85.069 0.4026 85.069 84.906 85.309 0 92 26 5 0 0 0 0.0059861 1 46460 46.706 46.706 1 1.3986 1.1761 0 3090600 1517900 1572700 17469 1058 6599 6759 27335 27335 INFYCPGSALGR 12 0 1 Unmodified _INFYCPGSALGR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.8328 2 677.832254 1353.64996 72910.05 0.6456 0.00043761 -0.72416 -0.00049086 -0.078565 -5.3254E-05 677.832354854893 682.836388506773 85.757 1.1239 85.757 85.211 86.335 0 656 93 10 0 0 0 1.0473E-17 2 51507 139.43 121.61 1 0.71075 0.80249 0 101100000 62277000 38820000 17470 2148 6600 6760 27336;27337 27337 INFYCPGSALGR 12 0 1 Unmodified _INFYCPGSALGR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8323 2 677.832254 1353.64996 72656.17 0.68624 0.00046516 -0.73525 -0.00049837 -0.049006 -3.3218E-05 677.832295506949 682.836373616356 84.73 1.097 84.73 84.294 85.391 0 613 93 11 0 0 0 4.4266E-08 2 52064 115.42 104.25 1 0.69935 0.80242 0 183490000 111710000 71784000 17471 2148 6600 6760 27338;27339 27339 INFYCPGSALGR 12 0 1 Unmodified _INFYCPGSALGR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 677.8333 2 677.832254 1353.64996 72812.03 0.6263 0.00042453 -0.63804 -0.00043248 -0.011735 -7.9542E-06 677.832295861207 682.836182893848 98.231 1.0647 98.231 97.724 98.789 0 503 70 13 0 0 0 0.0062634 3 55204 52.167 52.167 1 0.96698 0.81266 0 26757000 13462000 13295000 17472 2148 6600 6760 27340;27341;27342 27341 INFYCPGSALGR 12 0 1 Unmodified _INFYCPGSALGR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.8334 2 677.832254 1353.64996 71694.57 0.66868 0.00045325 -0.67806 -0.00045961 -0.0093747 -6.3545E-06 677.832083776195 682.836032760266 98.143 1.1268 98.143 97.63 98.757 0 455 69 10 0 0 0 0.0056981 1 54329 50.284 41.325 1 0.92039 0.79953 0 24293000 12925000 11368000 17473 2148 6600 6760 27343 27343 INGGGGGSVPGIER 14 0 1 Unmodified _INGGGGGSVPGIER_ 0 0 0 M0QZM1 M0QZM1 M0QZM1 HNRNPM ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.3352 2 635.330933 1268.64731 NaN NaN NaN -0.41107 -0.00026117 NaN NaN NaN NaN 41.517 0.43336 41.517 41.281 41.715 0 0 0 0 0.0034606 1 21828 62.088 49.472 1 NaN NaN 0 7867400 0 7867400 17474 1354 6601 6761 27344 27344 INGGGGGSVPGIER 14 0 1 Unmodified _INGGGGGSVPGIER_ 0 0 0 M0QZM1 M0QZM1 M0QZM1 HNRNPM ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3348 2 635.330933 1268.64731 NaN NaN NaN -0.14042 -8.9215E-05 NaN NaN NaN NaN 40.596 0.45341 40.596 40.374 40.828 0 0 0 0 0.00065816 1 21681 77.593 57.807 1 NaN NaN 0 9197400 0 9197400 17475 1354 6601 6761 27345 27345 INISEGNCPER 11 0 1 Unmodified _INISEGNCPER_ 0 0 0 Q53SS8;Q15365;F8VTZ0;H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;J3QT27;Q5MJP6;E9PFP8;P57721;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.8058 2 644.801151 1287.58775 73863.5 0.7239 0.00046677 -0.32303 -0.00020829 0.40087 0.00025848 644.80108698946 649.805245077192 33.019 0.92497 33.019 32.569 33.494 0 422 89 7 0 0 0 0.00022695 2 16596 91.636 79.4 1 1.9802 2.2183 0 90118000 29728000 60390000 17476 1263;1760;1759 6602 6762 27346;27347 27347 INISEGNCPER 11 0 1 Unmodified _INISEGNCPER_ 0 0 0 Q53SS8;Q15365;F8VTZ0;H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;J3QT27;Q5MJP6;E9PFP8;P57721;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.8055 2 644.801151 1287.58775 73027.58 1.0075 0.00064962 -0.25464 -0.00016419 0.75284 0.00048543 644.801119303165 649.805196553838 32.546 0.79314 32.546 32.129 32.922 0 362 74 8 0 0 0 2.4004E-08 2 16051 121.6 101.61 1 2.0662 2.3688 0 176740000 60422000 116310000 17477 1263;1760;1759 6602 6762 27348;27349 27349 INISEGNCPER 11 0 1 Unmodified _INISEGNCPER_ 0 0 0 Q53SS8;Q15365;F8VTZ0;H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;J3QT27;Q5MJP6;E9PFP8;P57721;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.8053 2 644.801151 1287.58775 73638.02 0.62489 0.00040293 -0.44249 -0.00028532 0.1824 0.00011761 644.801046017719 649.805161101037 38.188 0.63375 38.188 37.955 38.588 0 276 48 8 0 0 0 0.0004776 2 17198 75.387 70.447 1 1.5999 1.3493 0 28710000 11067000 17642000 17478 1263;1760;1759 6602 6762 27350;27351 27350 INISEGNCPER 11 0 1 Unmodified _INISEGNCPER_ 0 0 0 Q53SS8;Q15365;F8VTZ0;H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;J3QT27;Q5MJP6;E9PFP8;P57721;Q15366;B4DLC0 Q53SS8;H3BRU6;Q15366 Q15366 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.8057 2 644.801151 1287.58775 74106.79 0.37609 0.0002425 -0.21411 -0.00013806 0.16198 0.00010444 644.801188666542 649.805292640888 38.445 0.6343 38.445 38.131 38.765 0 286 48 9 0 0 0 0.00033089 1 16875 86.898 82.599 1 1.5178 1.3139 0 23405000 9170500 14235000 17479 1263;1760;1759 6602 6762 27352 27352 INISQVIAVVGQQNVEGK 18 1 0 Unmodified _INISQVIAVVGQQNVEGK_ 0 0 0 P24928;A0A087WWE2 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 952.5406 2 948.531089 1895.04763 64360.5 0.94732 0.00089856 0.052 4.9324E-05 0.99932 0.00094789 948.531269293436 953.03897491959 119.31 0.4693 119.31 119.12 119.59 -7.6294E-06 113 30 6 0 0 0 1.4953E-11 2 76780 101.3 95.919 1 0.69168 0.71954 0 11536000 6904700 4631000 17480 1514 6603 6763 27353;27354 27354 INISQVIAVVGQQNVEGK 18 1 0 Unmodified _INISQVIAVVGQQNVEGK_ 0 0 0 P24928;A0A087WWE2 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 952.5387 2 948.531089 1895.04763 63801.27 0.65887 0.00062496 0.35546 0.00033717 1.0143 0.00096213 949.032812763111 952.538128417816 118.81 0.45928 118.81 118.65 119.11 0 118 28 6 0 0 0 5.2373E-05 2 78234 57.328 57.328 1 0.79612 0.82124 0 11508000 5927000 5581100 17481 1514 6603 6763 27355;27356 27356 INISQVIAVVGQQNVEGK 18 1 0 Unmodified _INISQVIAVVGQQNVEGK_ 0 0 0 P24928;A0A087WWE2 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 949.0333 2 948.531089 1895.04763 63159.18 0.88859 0.00084285 0.057944 5.4962E-05 0.94653 0.00089781 948.531731152168 952.537488625077 132.19 0.42456 132.19 131.98 132.4 0 84 19 7 0 0 0 4.7457E-05 1 80360 58.824 58.824 1 0.76668 0.59712 0 3732900 1946300 1786500 17482 1514 6603 6763 27357 27357 INLELR 6 0 1 Unmodified _INLELR_ 0 0 0 Q53F20;Q9BTT0;E9PPH5;Q5TB19;B4E0D5;E9PLC4;E9PI45;Q5TB25 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.2316 2 379.231971 756.449388 98359.48 -0.21118 -8.0086E-05 0.26995 0.00010237 0.058765 2.2286E-05 379.23197008503 384.236100541684 62.062 0.53368 62.062 61.853 62.387 0 161 45 7 0 0 0 0.0021386 1 35575 146.66 16.656 1 2.5013 2.8731 0 140290000 38443000 101840000 17483 1784 6604 6764 27358 27358 INLELR 6 0 1 Unmodified _INLELR_ 0 0 0 Q53F20;Q9BTT0;E9PPH5;Q5TB19;B4E0D5;E9PLC4;E9PI45;Q5TB25 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.2318 2 379.231971 756.449388 NaN NaN NaN 0.36878 0.00013985 NaN NaN NaN NaN 60.664 0.55053 60.664 60.55 61.1 3.8147E-06 0 0 0 0.00013093 1 35495 130.01 29.734 1 NaN NaN 0 22506000 22506000 0 17484 1784 6604 6764 27359 27359 INLGGSQAAGYLQR 14 0 1 Unmodified _INLGGSQAAGYLQR_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.3872 2 724.386239 1446.75793 NaN NaN NaN 0.091058 6.5961E-05 NaN NaN NaN NaN 73.455 0.33015 73.455 73.346 73.676 0 0 0 0 0.010646 1 43082 60.691 50.319 1 NaN NaN 0 6383900 6383900 0 17485 2045 6605 6765 27360 27360 INLGGSQAAGYLQR 14 0 1 Unmodified _INLGGSQAAGYLQR_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.3863 2 724.386239 1446.75793 76396.12 0.69801 0.00050563 0.052385 3.7947E-05 0.7504 0.00054358 724.386052541045 729.390796371136 72.4 0.44059 72.4 72.204 72.645 0 101 40 4 0 0 0 0.00015275 1 43421 76.302 76.302 1 0.69729 0.69348 0 16298000 8825700 7472400 17486 2045 6605 6765 27361 27361 INLGGSQAAGYLQR 14 0 1 Unmodified _INLGGSQAAGYLQR_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.3905 2 724.386239 1446.75793 71336.73 0.64164 0.00046479 -0.21454 -0.00015541 0.4271 0.00030939 724.385694512963 729.390406839356 84.393 0.46687 84.393 84.147 84.614 7.6294E-06 99 36 4 0 0 0 0.00085746 3 46075 57.836 56.359 1 1.2048 1.019 0 4921300 1843100 3078200 17487 2045 6605 6765 27362;27363;27364 27363 INLGGSQAAGYLQR 14 0 1 Unmodified _INLGGSQAAGYLQR_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.3861 2 724.386239 1446.75793 NaN NaN NaN -0.47146 -0.00034152 NaN NaN NaN NaN 84.578 0.48315 84.578 84.304 84.787 0 0 0 0 0.01079 1 45409 65.5 50.35 1 NaN NaN 0 1455400 1455400 0 17488 2045 6605 6765 27365 27365 INLGGSQAAGYLQR 14 0 1 Unmodified _INLGGSQAAGYLQR_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.3925 2 724.386239 1446.75793 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.605 1 84.605 84.105 85.105 -7.6294E-06 0 0 0 0.0044029 1 45392 56.225 29.11 1 17489 2045 6605 6765 27366 27366 INLIAPPR 8 0 1 Unmodified _INLIAPPR_ 0 0 0 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.2867 2 447.281995 892.549437 91913.05 0.33175 0.00014838 0.96385 0.00043111 1.2956 0.0005795 447.282054185878 452.286808437699 71.827 0.74765 71.827 71.271 72.018 7.6294E-06 184 65 6 0 0 0 0.019676 2 41871 58.981 40.602 1 1.5579 1.5909 0 31038000 13291000 17747000 17490 1445 6606 6766 27367;27368 27367 INLIAPPR 8 0 1 Unmodified _INLIAPPR_ 0 0 0 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.2819 2 447.281995 892.549437 90655.03 0.18644 8.3391E-05 0.26889 0.00012027 0.45533 0.00020366 447.281915447382 452.286283288285 70.479 0.52902 70.479 70.156 70.685 0 151 42 5 0 0 0 0.009492 2 42081 74.415 53.86 1 1.5026 1.6324 0 28371000 13086000 15285000 17491 1445 6606 6766 27369;27370 27370 INLIAPPR 8 0 1 Unmodified _INLIAPPR_ 0 0 0 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 452.2862 2 447.281995 892.549437 91676.7 0.091629 4.0984E-05 0.56322 0.00025192 0.65485 0.0002929 447.281968224446 452.286638635222 81.785 0.46754 81.785 81.521 81.988 0 77 27 4 0 0 0 0.055747 1 44390 41.652 33.059 1 0.73232 0.63617 0 2253200 1219900 1033300 17492 1445 6606 6766 27371 27371 INLIAPPR 8 0 1 Unmodified _INLIAPPR_ 0 0 0 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 447.2818 2 447.281995 892.549437 91607.78 0.037447 1.6749E-05 0.5094 0.00022785 0.54685 0.0002446 447.281880977311 452.286672055691 81.924 0.5934 81.924 81.534 82.127 0 92 32 4 0 0 0 0.02092 2 43619 58.167 44.496 1 0.79298 0.70159 0 1905700 1068600 837090 17493 1445 6606 6766 27372;27373 27373 INLPQK 6 1 0 Unmodified _INLPQK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 356.721 2 356.721239 711.427924 102916 0.84111 0.00030004 0.03092 1.103E-05 0.87203 0.00031107 356.721118279355 360.72821510587 29.719 0.3301 29.719 29.57 29.9 1.9073E-06 67 23 5 0 0 0 0.040098 1 14356 107.73 26.432 1 0.36866 0.39623 0 37513000 27728000 9784800 17494 1965 6607 6767 27374 27374 INNAAFEAVVVTNTIPQEDK 20 1 0 Unmodified _INNAAFEAVVVTNTIPQEDK_ 0 0 0 A0A140VK41;P11908;B2R860;H7C540 A0A140VK41 A0A140VK41 PRPS2 Ribose-phosphate pyrophosphokinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1091.0687 2 1087.06041 2172.10626 60325.93 0.19673 0.00021386 0.056672 6.1606E-05 0.2534 0.00027547 1087.06052193476 1091.06797110065 106.7 0.39366 106.7 106.47 106.86 7.6294E-06 78 29 5 0 0 0 6.2529E-06 1 66233 54.09 54.09 1 2.7447 2.7826 0 10218000 2225700 7992000 17495 616 6608 6768 27375 27375 INNAAFEAVVVTNTIPQEDK 20 1 0 Unmodified _INNAAFEAVVVTNTIPQEDK_ 0 0 0 A0A140VK41;P11908;B2R860;H7C540 A0A140VK41 A0A140VK41 PRPS2 Ribose-phosphate pyrophosphokinase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1091.0673 2 1087.06041 2172.10626 NaN NaN NaN -0.042076 -4.5739E-05 NaN NaN NaN NaN 106.12 0.37197 106.12 105.91 106.28 7.6294E-06 0 0 0 7.415E-14 1 67502 101.3 81.208 1 NaN NaN 0 6354800 0 6354800 17496 616 6608 6768 27376 27376 INPDNYGMDLNSDDSTDDEAHPR 23 0 1 Oxidation (M) _INPDNYGM(ox)DLNSDDSTDDEAHPR_ INPDNYGM(1)DLNSDDSTDDEAHPR INPDNYGM(59.81)DLNSDDSTDDEAHPR 0 1 0 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.3596 3 869.689382 2606.04632 66041.7 0.67531 0.00058731 -0.42881 -0.00037293 0.2465 0.00021437 870.023155496986 873.359375704984 49.186 0.47446 49.186 48.913 49.387 -3.8147E-06 161 35 8 0 0 0 1.2697E-08 1 26874 59.814 59.814 1 1.865 1.9075 0 18995000 6050000 12945000 17497 2059 6609 6769 27377 27377 1888 INPDNYGMDLNSDDSTDDEAHPR 23 0 1 Oxidation (M) _INPDNYGM(ox)DLNSDDSTDDEAHPR_ INPDNYGM(1)DLNSDDSTDDEAHPR INPDNYGM(94.71)DLNSDDSTDDEAHPR 0 1 0 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.3594 3 869.689382 2606.04632 66422.95 0.47438 0.00041256 -0.3107 -0.00027021 0.16368 0.00014235 870.02344343493 873.35918103492 48.056 0.31218 48.056 47.852 48.165 0 81 20 6 0 0 0 1.05E-12 2 26773 94.707 94.592 1 2.2072 2.207 0 16954000 7186800 9767200 17498 2059 6609 6769 27378;27379 27379 1888 INPICNDHYR 10 0 1 Unmodified _INPICNDHYR_ 0 0 0 V9HWH0;Q96KB5;E5RFX4 V9HWH0 V9HWH0 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.8756 3 434.540028 1300.59825 91884.74 0.15979 6.9436E-05 -0.31691 -0.00013771 -0.15712 -6.8273E-05 434.540159793616 437.875996610492 28.147 0.17767 28.147 28.025 28.203 1.9073E-06 29 8 5 0 0 0 0.00085319 1 13330 59.542 56.593 1 1.8337 1.8389 0 17733000 6501400 11232000 17499 1975 6610 6770 27380 27380 INPYMSSPCHIEMILTEK 18 1 0 2 Oxidation (M) _INPYM(ox)SSPCHIEM(ox)ILTEK_ INPYM(1)SSPCHIEM(1)ILTEK INPYM(53.45)SSPCHIEM(53.45)ILTEK 0 2 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3517 3 732.344226 2194.01085 70064.34 0.35887 0.00026282 -0.33206 -0.00024318 0.026812 1.9635E-05 732.678499082338 735.015654923163 89.459 1.0818 89.459 88.87 89.952 0 674 89 10 0 0 0 2.8664E-05 2 53729 53.453 53.453 1 1.3866 1.5624 0 125980000 53904000 72074000 17500 106 6611 6771 27381;27382 27381 91;92 INPYMSSPCHIEMILTEK 18 1 0 2 Oxidation (M) _INPYM(ox)SSPCHIEM(ox)ILTEK_ INPYM(1)SSPCHIEM(1)ILTEK INPYM(69.98)SSPCHIEM(69.98)ILTEK 0 2 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.685 3 732.344226 2194.01085 70074.66 0.60271 0.00044139 -0.35915 -0.00026302 0.24356 0.00017837 732.67847518823 735.350229600494 88.331 0.97903 88.331 87.767 88.746 -7.6294E-06 646 84 10 0 0 0 1.0722E-05 4 54264 69.979 69.979 1 1.3656 1.5633 0 162090000 66656000 95434000 17501 106 6611 6771 27383;27384;27385;27386 27384 91;92 INPYMSSPCHIEMILTEK 18 1 0 Unmodified _INPYMSSPCHIEMILTEK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.6817 3 721.680949 2162.02102 70935.94 0.96019 0.00069295 -0.47469 -0.00034258 0.4855 0.00035037 722.015261265718 724.686712348866 115.1 0.43967 115.1 114.91 115.35 0 82 19 6 0 0 0 0.053662 1 67465 19.292 19.292 1 0.96517 0.76015 0 5702100 3104600 2597500 17502 106 6611 6772 27387 27387 INPYMSSPCHIEMILTEK 18 1 0 Unmodified _INPYMSSPCHIEMILTEK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.6814 3 721.680949 2162.02102 NaN NaN NaN 0.23472 0.00016939 NaN NaN NaN NaN 114.92 0.33504 114.92 114.74 115.07 0 0 0 0 0.041745 1 66372 24.3 20.113 1 NaN NaN 0 3327300 3327300 0 17503 106 6611 6772 27388 27388 INQLSEENGDLSFK 14 1 0 Unmodified _INQLSEENGDLSFK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.4009 2 797.391384 1592.76822 68664.1 0.46189 0.00036831 0.98919 0.00078877 1.4511 0.0011571 797.392769831662 801.398865524491 72.579 0.77383 72.579 72.269 73.043 0 205 57 7 0 0 0 3.2513E-06 2 42452 103.08 76.112 1 0.52714 0.52028 0 25143000 15498000 9645300 17504 186;1747;718 6612 6773 27389;27390 27389 INQLSEENGDLSFK 14 1 0 Unmodified _INQLSEENGDLSFK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.4194 2 797.391384 1592.76822 69056.5 0.48959 0.00039039 0.54889 0.00043768 1.0385 0.00082807 797.392257519488 801.39816097279 71.479 0.76372 71.479 71.12 71.883 0 179 58 5 0 0 0 3.9944E-13 1 42822 113.63 113.63 1 0.56067 0.5932 0 20205000 11391000 8814400 17505 186;1747;718 6612 6773 27391 27391 INQLSEENGDLSFK 14 1 0 Unmodified _INQLSEENGDLSFK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 801.399 2 797.391384 1592.76822 68547.81 0.51984 0.00041452 0.82989 0.00066175 1.3497 0.0010763 797.391561101943 801.398509867293 83.295 0.61306 83.295 82.902 83.515 0 173 34 7 0 0 0 0.0061121 2 45248 42.629 36.526 1 1.3845 1.097 0 10348000 4962600 5385700 17506 186;1747;718 6612 6773 27392;27393 27392 INQLSEENGDLSFK 14 1 0 Unmodified _INQLSEENGDLSFK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 801.4002 2 797.391384 1592.76822 67672.24 0.68153 0.00054344 0.29658 0.00023649 0.97811 0.00077994 797.391422847951 801.398113472774 83.448 0.53812 83.448 83.185 83.723 0 139 29 7 0 0 0 0.0012489 1 44591 55.04 55.04 1 1.4609 1.1969 0 8670900 2835400 5835500 17507 186;1747;718 6612 6773 27394 27394 INQLYEQSK 9 1 0 Unmodified _INQLYEQSK_ 0 0 0 A8K6S3 A8K6S3 A8K6S3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.8003 2 561.793121 1121.57169 NaN NaN NaN -0.21981 -0.00012349 NaN NaN NaN NaN 44.286 0.42975 44.286 44.149 44.579 0 0 0 0 0.014214 1 23846 63.419 4.6038 1 NaN NaN 0 8725700 0 8725700 17508 762 6613 6774 27395 27395 INQLYEQSK 9 1 0 Unmodified _INQLYEQSK_ 0 0 0 A8K6S3 A8K6S3 A8K6S3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8005 2 561.793121 1121.57169 NaN NaN NaN -1.1011 -0.00061858 NaN NaN NaN NaN 43.705 0.34664 43.705 43.481 43.828 3.8147E-06 0 0 0 0.0047626 1 23795 75.738 22.952 1 NaN NaN 0 15129000 0 15129000 17509 762 6613 6774 27396 27396 INQQENSLTLEK 12 1 0 Unmodified _INQQENSLTLEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.878 2 708.870088 1415.72562 73427 0.74567 0.00052858 0.054562 3.8677E-05 0.80023 0.00056726 708.870212777955 712.877127903631 42.48 0.34692 42.48 42.327 42.674 -3.8147E-06 82 27 5 0 0 0 3.63E-08 1 22546 140.49 72.493 1 1.3068 1.3845 0 15696000 7552500 8143900 17510 1581 6614 6775 27397 27397 INQQENSLTLEK 12 1 0 Unmodified _INQQENSLTLEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.8774 2 708.870088 1415.72562 74594.44 0.66143 0.00046887 0.14618 0.00010362 0.80761 0.00057249 708.870200323204 712.877333495521 41.888 0.43573 41.888 41.655 42.09 0 83 39 4 0 0 0 0.00023349 1 22569 102.52 54.921 1 1.1478 1.1915 0 11216000 5323300 5892800 17511 1581 6614 6775 27398 27398 INQQENSLTLEK 12 1 0 Unmodified _INQQENSLTLEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.8769 2 708.870088 1415.72562 73338.54 0.56151 0.00039804 -0.082587 -5.8543E-05 0.47893 0.0003395 708.870005206509 712.87697365917 49.494 0.46092 49.494 49.273 49.734 0 144 37 5 0 0 0 0.060008 1 24160 39.785 5.064 1 1.9659 1.6108 0 2480700 785660 1695100 17512 1581 6614 6775 27399 27399 INQQENSLTLEK 12 1 0 Unmodified _INQQENSLTLEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.8772 2 708.870088 1415.72562 73608.21 0.2921 0.00020706 0.17241 0.00012221 0.46451 0.00032928 708.870291112925 712.877251585349 49.817 0.53175 49.817 49.603 50.135 -3.8147E-06 156 42 5 0 0 0 0.022961 1 23807 51.162 16.441 1 1.6442 1.2904 0 2257700 894460 1363200 17513 1581 6614 6775 27400 27400 INQVFHGSCITEGNELTK 18 1 0 Unmodified _INQVFHGSCITEGNELTK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 683.3366 3 683.001956 2045.98404 72717.44 0.65221 0.00044546 -0.089563 -6.1172E-05 0.56264 0.00038429 683.001892965432 685.673270344055 75.051 1.0817 75.051 74.776 75.857 7.6294E-06 253 47 8 0 0 0 9.3214E-06 1 39856 66.152 57.151 1 0.35302 0.27397 0 14348000 10501000 3847400 17514 1665 6615 6776 27401 27401 INQVFHGSCITEGNELTK 18 1 0 Unmodified _INQVFHGSCITEGNELTK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.3373 3 683.001956 2045.98404 72350.2 0.48474 0.00033108 0.11623 7.9382E-05 0.60097 0.00041046 683.336582728937 685.673366517108 75.29 0.52869 75.29 75.042 75.571 0 228 38 8 0 0 0 1.8509E-05 1 39206 54.964 54.964 1 0.32883 0.27065 0 10370000 7876500 2493600 17515 1665 6615 6776 27402 27402 INSAPQQIEVFPPFR 15 0 1 Unmodified _INSAPQQIEVFPPFR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 871.9688 2 871.964854 1741.91515 71745.74 0.72342 0.0006308 0.86426 0.00075361 1.5877 0.0013844 872.46661710899 877.470966516768 122.31 0.43169 122.31 122.05 122.48 7.6294E-06 64 20 6 0 0 0 0.022072 3 72867 30.438 24.945 1 0.68633 0.57622 0 3124900 1894700 1230200 17516 1937 6616 6777 27403;27404;27405 27403 INSAPQQIEVFPPFR 15 0 1 Unmodified _INSAPQQIEVFPPFR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 877.4691 2 871.964854 1741.91515 NaN NaN NaN 0.21733 0.0001895 NaN NaN NaN NaN 121.99 0.30745 121.99 121.91 122.22 0 0 0 0 0.046749 1 71880 37.426 31.185 1 NaN NaN 0 1594600 0 1594600 17517 1937 6616 6777 27406 27406 INVNEIFYDLVR 12 0 1 Unmodified _INVNEIFYDLVR_ 0 0 0 A0A024RB87;P61224;Q5U0C3;A8KAH9;P62834;A0A0J9YXB3;A6NIZ1;F5H823;B7ZB78;F5GZG1;B7ZAY2 A0A024RB87 A0A024RB87 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A;Ras-related protein Rap-1b-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.9073 2 747.901191 1493.78783 71304.81 0.82898 0.00061999 -0.072656 -5.4339E-05 0.75632 0.00056565 747.901565225842 752.905356240625 133.07 0.86896 133.07 132.67 133.54 1.5259E-05 145 32 8 0 0 0 0.00022365 2 86766 74.162 64.475 1 1.8475 1.8963 0 19361000 6845900 12515000 17518 329 6617 6778 27407;27408 27407 INVNEIFYDLVR 12 0 1 Unmodified _INVNEIFYDLVR_ 0 0 0 A0A024RB87;P61224;Q5U0C3;A8KAH9;P62834;A0A0J9YXB3;A6NIZ1;F5H823;B7ZB78;F5GZG1;B7ZAY2 A0A024RB87 A0A024RB87 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A;Ras-related protein Rap-1b-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.9015 2 747.901191 1493.78783 70461.45 0.93329 0.00069801 0.18377 0.00013744 1.1171 0.00083545 747.901324607345 752.90528919159 132.59 0.94144 132.59 132.16 133.11 0 273 52 9 0 0 0 1.5921E-12 2 88745 127.42 110.4 1 1.8112 2.0054 0 42310000 13722000 28588000 17519 329 6617 6778 27409;27410 27410 INVQNNVDLGQPVK 14 1 0 Unmodified _INVQNNVDLGQPVK_ 0 0 0 B4DJ73;B4DHL5;B4E228;Q6NW34;B4DVN9;E9PFF8;B4DDJ6 B4DJ73 B4DJ73 C3orf17 Uncharacterized protein C3orf17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.4272 2 769.420279 1536.82601 72712.25 0.73254 0.00056363 -1.2116 -0.0009322 -0.47902 -0.00036857 769.920126819145 773.427571320166 67.37 0.41074 67.37 67.097 67.508 0 76 32 4 0 0 0 0.00024871 1 39820 62.408 62.408 1 1.0868 1.0952 0 7433200 4571600 2861600 17520 977 6618 6779 27411 27411 INVYYNEAAGNK 12 1 0 Unmodified _INVYYNEAAGNK_ 0 0 0 Q13885;B2R6L0;A5D907;A5D906 Q13885 Q13885 TUBB2A Tubulin beta-2A chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.3398 2 678.333141 1354.65173 NaN NaN NaN -0.54653 -0.00037073 NaN NaN NaN NaN 46.54 0.31768 46.54 46.367 46.684 -3.8147E-06 0 0 0 0.013323 1 25163 53.683 42.875 1 NaN NaN 0 5954900 0 5954900 17521 1723 6619 6780 27412 27412 INVYYNEATGGK 12 1 0 Unmodified _INVYYNEATGGK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;B4DNW1 Q8IZ29 Q8IZ29 TUBB2C;TUBB4B Tubulin beta-4B chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.836 2 664.827692 1327.64083 74513.11 0.88696 0.00058968 0.71817 0.00047746 1.6051 0.0010671 664.827669271368 668.835668728486 49.533 0.64177 49.533 49.106 49.747 0 214 41 10 0 0 0 1.3878E-14 3 27086 137.85 109.45 1 1.5688 1.832 0 275230000 112170000 163060000 17522 1660 6620 6781 27413;27414;27415 27413 INVYYNEATGGK 12 1 0 Unmodified _INVYYNEATGGK_ 0 0 0 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;B4DNW1 Q8IZ29 Q8IZ29 TUBB2C;TUBB4B Tubulin beta-4B chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.828 2 664.827692 1327.64083 73600.27 0.83141 0.00055275 1.0209 0.00067874 1.8523 0.0012315 664.827903750436 668.835825616106 48.175 1.165 48.175 47.852 49.017 3.8147E-06 342 85 7 0 0 0 0.00057005 1 26772 83.862 65.422 1 1.361 1.5402 0 133980000 52873000 81109000 17523 1660 6620 6781 27416 27416 INVYYNESSSQK 12 1 0 Unmodified _INVYYNESSSQK_ 0 0 0 Q9BUF5;B4DP54;K7EL29;K7ESQ3;K7EQT3;K7EJ64;K7ERA8;K7EJZ4;K7EN98;K7EPE5 Q9BUF5 Q9BUF5 TUBB6 Tubulin beta-6 chain ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.3412 2 716.341163 1430.66777 NaN NaN NaN 0.19382 0.00013884 NaN NaN NaN NaN 40.176 0.26137 40.176 40.024 40.286 0 0 0 0 0.0016061 1 20954 76.143 55.272 1 NaN NaN 0 19763000 19763000 0 17524 2004 6621 6782 27417 27417 INYEESMMVR 10 0 1 2 Oxidation (M) _INYEESM(ox)M(ox)VR_ INYEESM(1)M(1)VR INYEESM(45.16)M(45.16)VR 0 2 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.2917 2 652.286488 1302.55842 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.332 1 30.332 29.832 30.832 -1.9073E-06 0 0 0 0.036453 1 14842 45.161 33.671 1 17525 1927 6622 6783 27418 27418 1758;1759 IPAISR 6 0 1 Unmodified _IPAISR_ 0 0 0 Q8IZT6;B3KWI2;B3KM85;Q5VYL4 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 328.7083 2 328.708131 655.40171 108117.1 0.67426 0.00022163 -0.042812 -1.4073E-05 0.63145 0.00020756 328.707871935541 333.712354743299 29.95 0.23837 29.95 29.819 30.058 1.9073E-06 54 17 4 0 0 0 0.037313 1 14579 122.5 24.857 1 0.72965 0.72515 0 11867000 5339000 6527500 17526 1902 6623 6784 27419 27419 IPALDLLIK 9 1 0 Unmodified _IPALDLLIK_ 0 0 0 P78527;B4DL41;F5GX40 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.3286 2 498.328611 994.642668 86674.86 0.57805 0.00028806 -0.037241 -1.8558E-05 0.5408 0.0002695 498.328423037917 502.335722666813 117.32 1.0204 117.32 116.89 117.91 0 263 70 6 0 0 0 0.0018606 1 75083 79.906 24.23 1 0.66913 0.72596 0 45386000 28502000 16885000 17527 1665 6624 6785 27420 27420 IPALDLLIK 9 1 0 Unmodified _IPALDLLIK_ 0 0 0 P78527;B4DL41;F5GX40 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.3286 2 498.328611 994.642668 86754.54 0.18476 9.2069E-05 0.28025 0.00013966 0.465 0.00023172 498.32863113079 502.335871705983 116.68 0.88644 116.68 116.29 117.18 0 218 55 7 0 0 0 0.00025784 2 76385 104.44 44.251 1 0.66048 0.66925 0 29344000 17732000 11612000 17528 1665 6624 6785 27421;27422 27422 IPALDLLIK 9 1 0 Unmodified _IPALDLLIK_ 0 0 0 P78527;B4DL41;F5GX40 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.3291 2 498.328611 994.642668 87133.71 0.43443 0.00021649 -0.016251 -8.0982E-06 0.41818 0.00020839 498.328467926152 502.335563952945 129.25 0.88324 129.25 128.95 129.83 0 127 40 6 0 0 0 0.04115 1 78085 41.575 24.21 1 0.30567 0.24016 0 3960400 2973100 987250 17529 1665 6624 6785 27423 27423 IPALDLLIK 9 1 0 Unmodified _IPALDLLIK_ 0 0 0 P78527;B4DL41;F5GX40 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.3285 2 498.328611 994.642668 88448.38 0.46279 0.00023062 0.06434 3.2063E-05 0.52713 0.00026268 498.328531815241 502.335571973503 128.98 0.6375 128.98 128.69 129.33 0 86 25 6 0 0 0 0.0054512 1 77048 66.692 37.543 1 0.33291 0.26463 0 3117400 2333200 784210 17530 1665 6624 6785 27424 27424 IPANQLAELWLK 12 1 0 Unmodified _IPANQLAELWLK_ 0 0 0 Q9NZM1;H0YD14 Q9NZM1 Q9NZM1 MYOF Myoferlin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.4102 2 698.403369 1394.79219 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.14 1 117.14 116.64 117.64 0 0 0 0 0.052502 1 74933 42.21 24.775 1 17531 2088 6625 6786 27425 27425 IPCDSPQSDPVDTPTSTK 18 1 0 Unmodified _IPCDSPQSDPVDTPTSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 976.954 2 972.946395 1943.87824 61897.65 0.38626 0.00037581 -0.40532 -0.00039435 -0.019052 -1.8537E-05 973.447144192099 976.953637222211 47.512 0.54345 47.512 47.248 47.791 0 111 46 5 0 0 0 3.0732E-17 3 25667 124.07 115.34 1 1.9941 2.1113 0 31254000 8799000 22455000 17532 1569 6626 6787 27426;27427;27428 27426 IPCDSPQSDPVDTPTSTK 18 1 0 Unmodified _IPCDSPQSDPVDTPTSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.4562 2 972.946395 1943.87824 62258.87 0.37718 0.00036697 0.077502 7.5406E-05 0.45468 0.00044238 973.447801656775 977.455208517357 46.474 0.59508 46.474 46.218 46.813 0 206 47 7 0 0 0 2.9696E-05 1 25533 66.533 66.533 1 1.826 1.8559 0 30149000 8258600 21890000 17533 1569 6626 6787 27429 27429 IPCDSPQSDPVDTPTSTK 18 1 0 Unmodified _IPCDSPQSDPVDTPTSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 973.4471 2 972.946395 1943.87824 62133.52 0.068369 6.6519E-05 -0.43579 -0.000424 -0.36742 -0.00035748 972.945322306244 976.953579554672 55.282 0.86541 55.282 54.806 55.671 0 365 55 9 0 0 0 0.0023084 1 27580 35.891 35.891 1 3.3419 2.5918 0 13955000 3109700 10845000 17534 1569 6626 6787 27430 27430 IPCESPPLEVVDTTASTK 18 1 0 Unmodified _IPCESPPLEVVDTTASTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 976.4935 2 972.485156 1942.95576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.204 1 90.204 89.704 90.704 -7.6294E-06 0 0 0 0.0068512 1 54487 46.88 32.622 1 17535 1569 6627 6788 27431 27431 IPCESPPLEVVDTTASTK 18 1 0 Unmodified _IPCESPPLEVVDTTASTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 976.4921 2 972.485156 1942.95576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.2 1 89.2 88.7 89.7 0 0 0 0 0.00098149 1 55049 56.482 42.802 1 17536 1569 6627 6788 27432 27432 IPCESPPLEVVDTTASTK 18 1 0 Unmodified _IPCESPPLEVVDTTASTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 976.9926 2 972.485156 1942.95576 62636.4 0.028059 2.7287E-05 0.54484 0.00052985 0.5729 0.00055714 972.485295366017 976.493047072859 103.24 0.67757 103.24 102.93 103.61 7.6294E-06 137 43 6 0 0 0 0.011462 1 58595 28.089 28.089 1 5.6837 4.4411 0 3251800 519020 2732800 17537 1569 6627 6788 27433 27433 IPDEFDNDPILVQQLR 16 0 1 Unmodified _IPDEFDNDPILVQQLR_ 0 0 0 Q0VAB1;A0A024R0M6;Q3ZCQ8;M0R047 Q0VAB1 Q0VAB1 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 961.504 2 956.494172 1910.97379 60995.16 0.7609 0.0007278 -0.017352 -1.6597E-05 0.74355 0.0007112 956.493558429042 961.498046918134 112.66 0.36191 112.66 112.49 112.85 0 114 27 6 0 0 0 0.0015828 1 71130 58.674 58.674 1 1.3192 1.3216 0 9043000 4115500 4927500 17538 53 6628 6789 27434 27434 IPDEFDNDPILVQQLR 16 0 1 Unmodified _IPDEFDNDPILVQQLR_ 0 0 0 Q0VAB1;A0A024R0M6;Q3ZCQ8;M0R047 Q0VAB1 Q0VAB1 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.4932 2 956.494172 1910.97379 63522.47 0.8545 0.00081733 0.54185 0.00051827 1.3963 0.0013356 956.495247000497 961.498216255278 112.17 0.42856 112.17 111.87 112.3 0 101 32 5 0 0 0 0.00013565 3 72546 85.845 79.812 1 1.1428 1.1395 0 11644000 6916600 4727000 17539 53 6628 6789 27435;27436;27437 27437 IPDEFDNDPILVQQLR 16 0 1 Unmodified _IPDEFDNDPILVQQLR_ 0 0 0 Q0VAB1;A0A024R0M6;Q3ZCQ8;M0R047 Q0VAB1 Q0VAB1 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 961.5018 2 956.494172 1910.97379 62487.43 0.49793 0.00047627 -0.65511 -0.00062661 -0.15718 -0.00015034 956.994372696218 961.999148753885 123.72 0.48561 123.72 123.48 123.97 0 62 20 6 0 0 0 0.0090898 1 74001 43.991 43.991 1 1.0347 0.896 0 2572700 1146600 1426000 17540 53 6628 6789 27438 27438 IPDEFDNDPILVQQLR 16 0 1 Unmodified _IPDEFDNDPILVQQLR_ 0 0 0 Q0VAB1;A0A024R0M6;Q3ZCQ8;M0R047 Q0VAB1 Q0VAB1 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 956.9973 2 956.494172 1910.97379 64505.75 0.47652 0.00045578 0.078988 7.5551E-05 0.5555 0.00053134 956.996485427619 961.498146865007 123.56 0.35239 123.56 123.41 123.76 0 53 13 5 0 0 0 0.019897 1 73003 28.764 28.585 1 1.2153 1.0948 0 2237700 1009700 1227900 17541 53 6628 6789 27439 27439 IPDHDPAPNVTVLLR 15 0 1 Unmodified _IPDHDPAPNVTVLLR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;A2A2S5;Q32NB1 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.6442 3 552.973778 1655.8995 84284.44 0.92587 0.00051198 -0.25044 -0.00013849 0.67542 0.00037349 552.973877939713 556.310441016983 91.31 0.41261 91.31 91.13 91.543 0 71 32 4 0 0 0 0.023682 1 55172 21.841 21.841 1 0.76252 0.7615 0 8054300 5068800 2985600 17542 471 6629 6790 27440 27440 IPDPEAVKPDDWDEDAPAK 19 2 0 Unmodified _IPDPEAVKPDDWDEDAPAK_ 0 0 1 P27824;D6RGY2;Q6ZP56 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.0091 3 703.332136 2106.97458 72786.64 0.51371 0.00036131 -0.32389 -0.0002278 0.18982 0.0001335 703.332176699893 709.008413548437 76.869 0.77135 76.869 76.529 77.301 0 317 66 8 0 0 0 0.00029719 1 45298 30.336 26.732 1 0.8917 1.054 0 32139000 18698000 13441000 17543 1526 6630 6791 27441 27441 IPDVDHAIVVLQK 13 1 0 Unmodified _IPDVDHAIVVLQK_ 0 0 0 REV__Q5T8U3 REV__Q5T8U3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.4205 2 723.919384 1445.82421 71444.58 0.79161 0.00057306 -0.20134 -0.00014575 0.59027 0.00042731 724.420543506715 727.926362073423 116.73 0.63976 116.73 116.38 117.02 7.6294E-06 220 43 7 0 0 0 0.005822 2 74460 46.891 46.891 1 0.75509 0.83539 0 57747000 32649000 25098000 + 17544 2179 6631 6792 27442;27443 27443 IPDVDHAIVVLQK 13 1 0 Unmodified _IPDVDHAIVVLQK_ 0 0 0 REV__Q5T8U3 REV__Q5T8U3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.9196 2 723.919384 1445.82421 71889.95 0.92078 0.00066657 -0.23517 -0.00017025 0.6856 0.00049632 723.919176499129 727.926206006596 128.41 0.69139 128.41 128.02 128.72 0 169 29 10 0 0 0 0.060893 1 76560 26.889 26.889 1 0.9215 0.75889 0 28889000 14936000 13953000 + 17545 2179 6631 6792 27444 27444 IPDWFLNR 8 0 1 Unmodified _IPDWFLNR_ 0 0 0 P62269;J3JS69 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7822 2 530.782359 1059.55016 82945.08 0.66184 0.00035129 0.057774 3.0665E-05 0.71962 0.00038196 530.782314823505 535.786441643432 101.72 1.4861 101.72 101.13 102.62 0 663 117 8 0 0 0 0.0042374 3 62766 94.262 65.1 1 0.94563 1.064 0 96039000 46191000 49848000 17546 1639 6632 6793 27445;27446;27447 27447 IPDWFLNR 8 0 1 Unmodified _IPDWFLNR_ 0 0 0 P62269;J3JS69 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.7872 2 530.782359 1059.55016 82612.2 0.43521 0.000231 0.074888 3.9749E-05 0.5101 0.00027075 530.782354060499 535.786427296801 100.93 1.5396 100.93 100.33 101.86 7.6294E-06 691 122 8 0 0 0 0.012693 2 63161 67.032 39.729 1 0.95645 1.0951 0 166460000 87992000 78465000 17547 1639 6632 6793 27448;27449 27448 IPEGLFDPSNVK 12 1 0 Unmodified _IPEGLFDPSNVK_ 0 0 0 Q6FI97;Q53FS0;O96019;D3DNS0;O94805 Q6FI97 Q6FI97 BAF53A;ACTL6A;ACTL6B Actin-like protein 6A;Actin-like protein 6B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.3561 2 658.34826 1314.68197 73803.72 1.136 0.00074789 0.5824 0.00038342 1.7184 0.0011313 658.348371595994 662.355636457901 91.229 0.74771 91.229 90.831 91.579 -7.6294E-06 340 59 7 0 0 0 0.00060692 2 54937 68.484 54.486 1 0.80356 0.90911 0 86735000 49075000 37660000 17548 1434 6633 6794 27450;27451 27450 IPEGLFDPSNVK 12 1 0 Unmodified _IPEGLFDPSNVK_ 0 0 0 Q6FI97;Q53FS0;O96019;D3DNS0;O94805 Q6FI97 Q6FI97 BAF53A;ACTL6A;ACTL6B Actin-like protein 6A;Actin-like protein 6B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.3563 2 658.34826 1314.68197 74309.38 1.0802 0.00071113 0.54332 0.00035769 1.6235 0.0010688 658.348398953404 662.355648761557 90.351 0.73622 90.351 89.933 90.669 -7.6294E-06 357 64 7 0 0 0 1.1412E-30 1 55798 175.49 159.52 1 0.79729 0.89549 0 116850000 63655000 53198000 17549 1434 6633 6794 27452 27452 IPEISIQDMTAQVTSPSGK 19 1 0 Oxidation (M) _IPEISIQDM(ox)TAQVTSPSGK_ IPEISIQDM(1)TAQVTSPSGK IPEISIQDM(41.09)TAQVTSPSGK 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1013.5168 2 1009.50916 2017.00377 NaN NaN NaN 0.78556 0.00079303 NaN NaN NaN NaN 86.759 0.32954 86.759 86.546 86.876 0 0 0 0 0.0024615 1 52284 41.092 28.111 1 NaN NaN 0 4057500 0 4057500 17550 1504 6634 6795 27453 27453 1267 IPEISIQDMTAQVTSPSGK 19 1 0 Oxidation (M) _IPEISIQDM(ox)TAQVTSPSGK_ IPEISIQDM(1)TAQVTSPSGK IPEISIQDM(59.9)TAQVTSPSGK 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1013.5163 2 1009.50916 2017.00377 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.251 1 86.251 85.751 86.751 0 0 0 0 0.00011512 1 51914 59.898 40.622 1 17551 1504 6634 6795 27454 27454 1267 IPEISIQDMTAQVTSPSGK 19 1 0 Oxidation (M) _IPEISIQDM(ox)TAQVTSPSGK_ IPEISIQDM(1)TAQVTSPSGK IPEISIQDM(43.76)TAQVTSPSGK 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1013.5165 2 1009.50916 2017.00377 NaN NaN NaN -0.41112 -0.00041503 NaN NaN NaN NaN 85.577 0.27475 85.577 85.496 85.77 0 0 0 0 0.0011555 1 52784 43.761 32.502 1 NaN NaN 0 6014400 0 6014400 17552 1504 6634 6795 27455 27455 1267 IPEIWEGHNIADYIDPAIMK 20 1 0 Oxidation (M) _IPEIWEGHNIADYIDPAIM(ox)K_ IPEIWEGHNIADYIDPAIM(1)K IPEIWEGHNIADYIDPAIM(65.89)K 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.0632 3 781.055949 2340.14602 69163.7 0.78274 0.00061137 -0.30076 -0.00023491 0.48199 0.00037646 781.389967098695 784.061661861138 116.59 0.57903 116.59 116.38 116.96 -7.6294E-06 244 39 9 0 0 0 6.5757E-07 1 74438 65.887 61.859 1 1.3163 1.4246 0 43318000 21895000 21423000 17553 1183 6635 6796 27456 27456 896 IPEIWEGHNIADYIDPAIMK 20 1 0 Oxidation (M) _IPEIWEGHNIADYIDPAIM(ox)K_ IPEIWEGHNIADYIDPAIM(1)K IPEIWEGHNIADYIDPAIM(50.23)K 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.0621 3 781.055949 2340.14602 68808.62 0.66751 0.00052136 0.28654 0.0002238 0.95405 0.00074516 781.390281648219 784.061631689965 116.07 0.72046 116.07 115.78 116.5 7.6294E-06 295 46 10 0 0 0 1.9657E-06 2 75758 50.226 50.226 1 1.3449 1.4868 0 44976000 22135000 22841000 17554 1183 6635 6796 27457;27458 27458 896 IPEIWEGHNIADYIDPAIMK 20 1 0 Unmodified _IPEIWEGHNIADYIDPAIMK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.0593 3 775.724311 2324.1511 68206.42 1.1823 0.00091714 -0.78667 -0.00061024 0.39563 0.0003069 776.057817624742 778.729361074506 134.08 0.29279 134.08 133.91 134.2 -1.5259E-05 102 12 11 0 0 0 1.5159E-06 1 81739 57.496 57.496 1 1.6649 1.3119 0 17611000 6666300 10944000 17555 1183 6635 6797 27459 27459 IPEIWEGHNIADYIDPAIMK 20 1 0 Unmodified _IPEIWEGHNIADYIDPAIMK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.0593 3 775.724311 2324.1511 69185.04 1.2695 0.00098475 0.37251 0.00028896 1.642 0.0012737 776.058681602074 778.730339400251 133.88 0.47025 133.88 133.65 134.12 1.5259E-05 127 22 11 0 0 0 6.0307E-07 1 80720 70.555 65.902 1 1.5235 1.2231 0 14240000 5189900 9050000 17556 1183 6635 6797 27460 27460 IPFNQALVFSNLHSR 15 0 1 Unmodified _IPFNQALVFSNLHSR_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.321 3 581.649406 1741.92639 82940.52 0.51932 0.00030206 0.70378 0.00040935 1.2231 0.00071141 581.984178730873 584.985835946137 111.93 0.48839 111.93 111.68 112.17 7.6294E-06 78 25 5 0 0 0 0.051664 1 63969 16.123 16.123 1 1.5136 1.3421 0 2396900 772650 1624300 17557 1901 6636 6798 27461 27461 IPGGIIEDSCVLR 13 0 1 Unmodified _IPGGIIEDSCVLR_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368;Q5SZX6;E9PRC8;E9PQ35 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 719.8824 2 714.879401 1427.74425 72917.88 0.77837 0.00055644 0.28015 0.00020027 1.0585 0.00075671 714.879559218492 719.883431659011 106.48 0.38331 106.48 106.26 106.65 0 64 21 4 0 0 0 0.028608 1 60845 33.89 19.655 1 1.2697 1.0995 0 1955100 741590 1213500 17558 951 6637 6799 27462 27462 IPGIYGR 7 0 1 Unmodified _IPGIYGR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 388.2267 2 388.226688 774.438824 96464.45 0.32604 0.00012658 -0.092615 -3.5956E-05 0.23342 9.0622E-05 388.226615026123 393.230706931354 46.256 1.2024 46.256 45.787 46.99 3.8147E-06 415 107 7 0 0 0 0.010036 1 24880 112.27 75.68 1 0.85127 0.99715 0 212060000 109510000 102550000 17559 2070 6638 6800 27463 27463 IPGIYGR 7 0 1 Unmodified _IPGIYGR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 388.2264 2 388.226688 774.438824 95017.5 0.32089 0.00012458 -0.068265 -2.6502E-05 0.25263 9.8076E-05 388.226605845195 393.230731372224 45.378 0.86026 45.378 44.966 45.826 0 327 75 7 0 0 0 0.0098981 1 24790 113.07 77.901 1 0.80704 0.93533 0 297220000 169040000 128170000 17560 2070 6638 6800 27464 27464 IPGLLGVFQK 10 1 0 Unmodified _IPGLLGVFQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.339 2 536.331685 1070.64882 NaN NaN NaN -0.14026 -7.5227E-05 NaN NaN NaN NaN 111.3 0.5284 111.3 111.11 111.64 0 0 0 0 8.0864E-08 1 69993 111.82 104.25 1 NaN NaN 0 9374900 0 9374900 17561 1037 6639 6801 27465 27465 IPGLLGVFQK 10 1 0 Unmodified _IPGLLGVFQK_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.3391 2 536.331685 1070.64882 NaN NaN NaN -0.00095725 -5.1341E-07 NaN NaN NaN NaN 110.66 0.55135 110.66 110.4 110.95 0 0 0 0 0.0025019 1 71099 80.229 69.008 1 NaN NaN 0 6383200 0 6383200 17562 1037 6639 6801 27466 27466 IPGLLSPHPLLQLSYTATDR 20 0 1 Unmodified _IPGLLSPHPLLQLSYTATDR_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.7449 3 731.407311 2191.2001 71539.54 0.85293 0.00062384 -0.092553 -6.7694E-05 0.76037 0.00055614 731.741475817053 734.743506166068 115.59 0.75563 115.59 115.26 116.01 -7.6294E-06 267 49 8 0 0 0 2.3417E-18 2 73583 121.44 121.44 1 1.3959 1.4358 0 25101000 9628400 15473000 17563 587 6640 6802 27467;27468 27468 IPGLLSPHPLLQLSYTATDR 20 0 1 Unmodified _IPGLLSPHPLLQLSYTATDR_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.0776 3 731.407311 2191.2001 71785.81 0.8365 0.00061182 -0.15543 -0.00011368 0.68107 0.00049814 731.741692872056 734.743161881359 114.8 0.59225 114.8 114.54 115.14 0 219 37 9 0 0 0 3.4738E-13 1 74765 101.92 101.92 1 1.3893 1.5601 0 45727000 16227000 29500000 17564 587 6640 6802 27469 27469 IPGLLSPHPLLQLSYTATDR 20 0 1 Unmodified _IPGLLSPHPLLQLSYTATDR_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 734.7438 3 731.407311 2191.2001 71445.71 0.94873 0.00069391 -0.61035 -0.00044641 0.33838 0.00024749 731.406456287563 734.743367237257 126.44 0.73259 126.44 126.13 126.86 0 86 25 7 0 0 0 7.0321E-07 2 76061 68.168 68.168 1 0.64283 0.55739 0 2479400 1533300 946170 17565 587 6640 6802 27470;27471 27470 IPHDFGLR 8 0 1 Unmodified _IPHDFGLR_ 0 0 0 G3V167;A8K214;Q9UGN5;B4DV82 G3V167 G3V167 PARP2 Poly [ADP-ribose] polymerase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 318.8433 3 318.843376 953.5083 109378.6 -0.30879 -9.8454E-05 0.42272 0.00013478 0.11393 3.6326E-05 318.843433789094 322.179492535876 49.592 0.34599 49.592 49.463 49.809 3.8147E-06 76 20 6 0 0 0 0.021473 2 27263 36.76 15.232 1 0.80168 0.83286 0 22318000 12503000 9815100 17566 706 6641 6803 27472;27473 27473 IPHDFGLR 8 0 1 Unmodified _IPHDFGLR_ 0 0 0 G3V167;A8K214;Q9UGN5;B4DV82 G3V167 G3V167 PARP2 Poly [ADP-ribose] polymerase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 318.8434 3 318.843376 953.5083 108259.2 -0.29464 -9.3944E-05 0.011156 3.5571E-06 -0.28349 -9.0387E-05 318.843301415957 322.179411272635 47.689 0.26006 47.689 47.592 47.852 0 71 19 5 0 0 0 0.0069042 2 26557 57.177 39.938 1 0.62974 0.71471 0 48518000 27855000 20663000 17567 706 6641 6803 27474;27475 27475 IPILLIQQPGK 11 1 0 Unmodified _IPILLIQQPGK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.3929 2 610.392273 1218.76999 78901.46 0.5749 0.00035091 0.11471 7.0015E-05 0.68961 0.00042093 610.392173837362 614.399460375954 104.9 0.76447 104.9 104.57 105.34 -7.6294E-06 299 62 7 0 0 0 2.4153E-12 2 64809 139.97 139.97 1 0.32033 0.34466 0 33095000 23837000 9258500 17568 1965 6642 6804 27476;27477 27476 IPILLIQQPGK 11 1 0 Unmodified _IPILLIQQPGK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.3995 2 610.392273 1218.76999 78953.52 0.48151 0.00029391 -0.038791 -2.3678E-05 0.44272 0.00027023 610.392097077358 614.399399098847 104.15 0.83946 104.15 103.75 104.59 0 333 69 7 0 0 0 2.0746E-12 2 65803 141.47 141.47 1 0.32377 0.34684 0 37108000 28047000 9060300 17569 1965 6642 6804 27478;27479 27479 IPILLIQQPGK 11 1 0 Unmodified _IPILLIQQPGK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.3921 2 610.392273 1218.76999 77930.32 0.27618 0.00016858 0.11134 6.7961E-05 0.38752 0.00023654 610.392177484413 614.399414945877 116.42 0.62651 116.42 116.21 116.84 0 128 25 8 0 0 0 7.6326E-10 2 68386 125.96 125.96 1 0.60673 0.47751 0 11052000 7042100 4010100 17570 1965 6642 6804 27480;27481 27481 IPILLIQQPGK 11 1 0 Unmodified _IPILLIQQPGK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.3998 2 610.392273 1218.76999 78675.74 0.77914 0.00047558 -0.08272 -5.0492E-05 0.69642 0.00042509 610.392064584118 614.399300838518 116.22 0.63329 116.22 115.98 116.62 7.6294E-06 151 29 8 0 0 0 0.00016538 2 67233 94.302 94.302 1 0.61201 0.50358 0 10274000 6474300 3800000 17571 1965 6642 6804 27482;27483 27482 IPILSTFLTAR 11 0 1 Unmodified _IPILSTFLTAR_ 0 0 0 C9J5H8;Q9UBB6 C9J5H8 C9J5H8 NCDN Neurochondrin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.3795 2 616.374081 1230.73361 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.95 1 122.95 122.45 123.45 7.6294E-06 0 0 0 0.0019117 1 79678 68.735 14.326 1 17572 1130 6643 6805 27484 27484 IPILSTFLTAR 11 0 1 Unmodified _IPILSTFLTAR_ 0 0 0 C9J5H8;Q9UBB6 C9J5H8 C9J5H8 NCDN Neurochondrin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.3787 2 616.374081 1230.73361 NaN NaN NaN -0.066213 -4.0812E-05 NaN NaN NaN NaN 122.39 0.25919 122.39 122.33 122.59 0 0 0 0 0.017908 1 81187 53.756 13.712 1 NaN NaN 0 1773600 0 1773600 17573 1130 6643 6805 27485 27485 IPILYGEVEK 10 1 0 Unmodified _IPILYGEVEK_ 0 0 0 A8K7A4;A0A140VJP2;Q9NZL9;H7C0X7;B7Z1X8 A8K7A4 A8K7A4 MAT2B Methionine adenosyltransferase 2 subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.339 2 580.831714 1159.64888 82111.73 0.59826 0.00034749 -1.7889 -0.0010391 -1.1906 -0.00069157 580.831759509395 585.338463919707 83.206 0.47939 83.206 82.936 83.415 0 121 35 7 0 0 0 0.0033968 1 51010 64.711 41.283 1 7.2582 7.3209 0 13325000 6038800 7286400 17574 605 6644 6806 27486 27486 IPILYGEVEK 10 1 0 Unmodified _IPILYGEVEK_ 0 0 0 A8K7A4;A0A140VJP2;Q9NZL9;H7C0X7;B7Z1X8 A8K7A4 A8K7A4 MAT2B Methionine adenosyltransferase 2 subunit beta ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.3406 2 580.831714 1159.64888 NaN NaN NaN 0.56538 0.00032839 NaN NaN NaN NaN 96.165 0.34166 96.165 96.042 96.383 0 0 0 0 0.048381 1 53116 47.198 23.043 1 NaN NaN 0 493120 0 493120 17575 605 6644 6806 27487 27487 IPISLVLR 8 0 1 Unmodified _IPISLVLR_ 0 0 0 A0A024R2M7;O95747;C9JIG9 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.8118 2 455.807845 909.601138 NaN NaN NaN -0.15294 -6.9712E-05 NaN NaN NaN NaN 101.56 0.75264 101.56 101.11 101.86 0 0 0 0 0.017319 1 63770 67.032 51.593 1 NaN NaN 0 7362800 0 7362800 17576 117 6645 6807 27488 27488 IPLGLDLK 8 1 0 Unmodified _IPLGLDLK_ 0 0 0 M0R3F6;A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01 M0R3F6 M0R3F6 SUGP2;SFRS14 SURP and G-patch domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.786 2 434.778754 867.542954 92470.8 0.42331 0.00018405 0.33478 0.00014555 0.75809 0.0003296 434.77872975801 438.786029036889 93.14 0.67554 93.14 92.63 93.306 0 181 58 4 0 0 0 0.038748 1 56152 47.849 4.7251 1 1.0284 1.0889 0 31261000 15422000 15839000 17577 228 6646 6808 27489 27489 IPLLLTSLSFK 11 1 0 Unmodified _IPLLLTSLSFK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.3945 2 616.386657 1230.75876 76397.89 0.83945 0.00051743 0.31496 0.00019414 1.1544 0.00071157 616.386625343502 620.393609482313 126.23 0.69459 126.23 125.88 126.58 7.6294E-06 291 53 7 0 0 0 0.00031294 2 81961 87.913 87.913 1 1.0533 1.1341 0 38181000 18058000 20123000 17578 1741 6647 6809 27490;27491 27490 IPLLLTSLSFK 11 1 0 Unmodified _IPLLLTSLSFK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.3944 2 616.386657 1230.75876 76674.44 0.68283 0.00042089 0.27368 0.00016869 0.95651 0.00058958 616.386643351312 620.393660751143 125.77 0.63517 125.77 125.46 126.09 -7.6294E-06 214 41 7 0 0 0 3.8072E-05 2 83651 99.815 99.815 1 1.0261 1.1365 0 46326000 23076000 23250000 17579 1741 6647 6809 27492;27493 27492 IPLNPYLNLHSLLPASNLAGK 21 1 0 Unmodified _IPLNPYLNLHSLLPASNLAGK_ 0 0 0 A0A087WZ13;E9PAU2 A0A087WZ13 A0A087WZ13 RAVER1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 749.4329 3 749.094956 2244.26304 72285.2 1.0928 0.00081863 2.0519 0.0015371 3.1448 0.0023557 749.431003543986 752.101602630548 133.81 0.29552 133.81 133.65 133.95 0 39 12 6 0 0 0 0.048404 1 80683 10.914 9.5852 1 1.2756 1.0475 0 9346700 4135700 5210900 17580 438 6648 6810 27494 27494 IPLVPENLLK 10 1 0 Unmodified _IPLVPENLLK_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.3652 2 568.357899 1134.70125 80725.47 0.98359 0.00055903 -0.02691 -1.5294E-05 0.95668 0.00054374 568.357827838323 572.364862665524 111.76 0.79504 111.76 111.46 112.25 0 315 56 8 0 0 0 1.3473E-05 2 70291 102.62 70.687 1 0.85852 1.0002 0 263300000 143340000 119960000 17581 378 6649 6811 27495;27496 27496 IPLVPENLLK 10 1 0 Unmodified _IPLVPENLLK_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.3654 2 568.357899 1134.70125 80931.45 0.73425 0.00041732 -0.11295 -6.4196E-05 0.6213 0.00035312 568.35771266559 572.364871941617 111.05 0.71596 111.05 110.74 111.45 -7.6294E-06 298 52 8 0 0 0 0.001179 1 71519 74.92 42.985 1 0.83441 0.94572 0 137650000 70262000 67389000 17582 378 6649 6811 27497 27497 IPLVPENLLK 10 1 0 Unmodified _IPLVPENLLK_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.3583 2 568.357899 1134.70125 79851.77 0.82736 0.00047024 -0.2032 -0.00011549 0.62416 0.00035475 568.357622664524 572.364824188578 123.05 0.72363 123.05 122.81 123.53 0 184 32 8 0 0 0 0.00051211 1 73468 85.67 53.736 1 1.1657 0.91873 0 17649000 8282300 9367000 17583 378 6649 6811 27498 27498 IPLVPENLLK 10 1 0 Unmodified _IPLVPENLLK_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.358 2 568.357899 1134.70125 80277.13 0.80879 0.00045968 -0.24965 -0.00014189 0.55915 0.0003178 568.357601970528 572.364783374456 122.92 0.66771 122.92 122.61 123.28 0 169 32 8 0 0 0 0.001324 2 72394 74.173 42.238 1 1.1381 0.91443 0 16070000 8224400 7845800 17584 378 6649 6811 27499;27500 27500 IPNFDVR 7 0 1 Unmodified _IPNFDVR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.735 2 430.734877 859.455202 91806.23 -0.14432 -6.2165E-05 -0.59126 -0.00025468 -0.73559 -0.00031684 430.734469556494 435.738780667718 62.4 1.9454 62.4 61.878 63.824 0 757 184 9 0 0 0 0.028572 3 36090 71.715 39.779 1 0.71157 0.8447 0 796250000 440340000 355920000 17585 1471 6650 6812 27501;27502;27503 27503 IPNFDVR 7 0 1 Unmodified _IPNFDVR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.7389 2 430.734877 859.455202 90620.01 -0.016376 -7.0539E-06 -0.67114 -0.00028908 -0.68752 -0.00029614 430.734498674454 435.73868321667 61.078 1.2968 61.078 60.663 61.96 3.8147E-06 680 122 8 0 0 0 0.02697 3 36010 84.097 31.414 1 0.74652 0.8759 0 803920000 455450000 348470000 17586 1471 6650 6812 27504;27505;27506 27505 IPNFDVR 7 0 1 Unmodified _IPNFDVR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 430.7347 2 430.734877 859.455202 90687.1 -0.37089 -0.00015976 0.017893 7.7072E-06 -0.353 -0.00015205 430.7349027099 435.738934753334 71.531 1.1614 71.531 71.103 72.264 0 470 86 9 0 0 0 0.057145 1 37582 51.787 24.825 1 1.3207 1.1442 0 155520000 65425000 90090000 17587 1471 6650 6812 27507 27507 IPNFDVR 7 0 1 Unmodified _IPNFDVR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 430.735 2 430.734877 859.455202 91711.08 -0.57598 -0.0002481 0.305 0.00013138 -0.27098 -0.00011672 430.735028543343 435.739033427389 71.95 1.4859 71.95 71.453 72.939 0 522 116 10 0 0 0 0.04679 1 37032 56.547 24.611 1 1.3461 1.1755 0 157840000 68502000 89340000 17588 1471 6650 6812 27508 27508 IPNPDFFEDLEPFR 14 0 1 Unmodified _IPNPDFFEDLEPFR_ 0 0 0 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.4222 2 868.419945 1734.82534 65561.18 0.60618 0.00052642 0.17843 0.00015495 0.78461 0.00068137 868.420140470343 873.925578165928 128.41 0.39909 128.41 128.21 128.61 0 118 28 6 0 0 0 2.6483E-06 2 83652 104.87 98.833 1 0.82215 0.82447 0 17095000 10400000 6695400 17589 1526 6651 6813 27509;27510 27510 IPNPDFFEDLEPFR 14 0 1 Unmodified _IPNPDFFEDLEPFR_ 0 0 0 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.9261 2 868.419945 1734.82534 65563.47 0.99921 0.00086773 0.30163 0.00026194 1.3008 0.0011297 868.921614972608 873.925363039673 128.03 0.37503 128.03 127.85 128.23 0 93 21 7 0 0 0 2.6687E-05 2 85483 96.64 87.911 1 0.73935 0.74075 0 18873000 10989000 7884300 17590 1526 6651 6813 27511;27512 27512 IPPPVIMVQNVSFK 14 1 0 Unmodified _IPPPVIMVQNVSFK_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.4575 2 784.947087 1567.87962 70744.41 0.85568 0.00067166 -0.09048 -7.1022E-05 0.7652 0.00060064 784.947168852697 789.455569943492 126.57 0.3642 126.57 126.36 126.72 0 57 12 6 0 0 0 0.05402 1 76090 24.343 24.343 1 1.1949 1.0097 0 1991300 816410 1174800 17591 455 6652 6814 27513 27513 IPPPVIMVQNVSFK 14 1 0 Unmodified _IPPPVIMVQNVSFK_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.4543 2 784.947087 1567.87962 69916.8 0.68106 0.0005346 -0.25723 -0.00020191 0.42383 0.00033269 784.947258105184 788.954056315303 126.36 0.41333 126.36 126.17 126.58 0 77 17 6 0 0 0 0.0077169 1 75058 39.918 39.918 1 1.3185 1.0399 0 2298000 1083800 1214200 17592 455 6652 6814 27514 27514 IPPSSAPTVLSVPAGTTIVK 20 1 0 Unmodified _IPPSSAPTVLSVPAGTTIVK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 968.0621 2 968.061691 1934.10883 63303.04 0.1915 0.00018538 0.24019 0.00023252 0.43169 0.0004179 968.563476082721 972.069085643889 106.76 0.49535 106.76 106.53 107.02 0 168 37 6 0 0 0 7.8247E-07 3 66324 80.312 80.312 1 0.69224 0.69852 0 18406000 10116000 8290000 17593 680 6653 6815 27515;27516;27517 27516 IPPSSAPTVLSVPAGTTIVK 20 1 0 Unmodified _IPPSSAPTVLSVPAGTTIVK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 968.062 2 968.061691 1934.10883 64150.13 0.48793 0.00047235 -0.041918 -4.0579E-05 0.44601 0.00043177 968.061523269542 972.570096888895 106.17 0.47768 106.17 105.96 106.44 0 190 36 7 0 0 0 0.00019694 2 67490 37.954 37.954 1 0.68276 0.71913 0 23818000 14472000 9345300 17594 680 6653 6815 27518;27519 27519 IPPSSAPTVLSVPAGTTIVK 20 1 0 Unmodified _IPPSSAPTVLSVPAGTTIVK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 968.5632 2 968.061691 1934.10883 63385.62 0.22407 0.00021691 0.18667 0.00018071 0.41074 0.00039762 968.56315290068 972.06888118748 118.14 0.55446 118.14 117.87 118.42 -7.6294E-06 136 22 8 0 0 0 4.2669E-06 2 69689 59.185 59.185 1 1.4132 1.1251 0 6709700 2447700 4262000 17595 680 6653 6815 27520;27521 27521 IPPSSAPTVLSVPAGTTIVK 20 1 0 Unmodified _IPPSSAPTVLSVPAGTTIVK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 968.5626 2 968.061691 1934.10883 62834.32 -0.0040585 -3.9289E-06 0.18219 0.00017637 0.17813 0.00017244 968.563202519122 972.570364186581 117.91 0.56697 117.91 117.64 118.2 -7.6294E-06 144 26 8 0 0 0 9.0415E-06 2 68645 49.482 49.482 1 1.5604 1.2726 0 7788300 2888400 4899900 17596 680 6653 6815 27522;27523 27523 IPPVAVR 7 0 1 Unmodified _IPPVAVR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 376.2448 2 376.244881 750.475209 98213.46 -0.028562 -1.0746E-05 -0.23024 -8.6628E-05 -0.2588 -9.7374E-05 376.244675981759 381.248810161823 46.637 0.93599 46.637 46.163 47.099 0 272 64 6 0 0 0 0.047923 1 22501 56.026 17.655 1 1.9077 1.6377 0 8198500 2558600 5639900 17597 515 6654 6816 27524 27524 IPQLAPPASDSTVTK 15 1 0 Unmodified _IPQLAPPASDSTVTK_ 0 0 0 Q16513 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.9253 2 762.917038 1523.81952 70028.45 0.76145 0.00058093 -0.31084 -0.00023715 0.45061 0.00034378 763.417442327923 766.923889524837 71.9 0.71844 71.9 71.683 72.402 0 137 44 5 0 0 0 0.00016833 2 41966 78.342 78.342 1 1.8652 1.9696 0 15544000 5388500 10155000 17598 1769 6655 6817 27525;27526 27525 IPQLAPPASDSTVTK 15 1 0 Unmodified _IPQLAPPASDSTVTK_ 0 0 0 Q16513 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.9243 2 762.917038 1523.81952 70626.62 0.68344 0.00052141 -0.73964 -0.00056428 -0.056199 -4.2875E-05 762.916345141621 766.923707039586 70.808 0.44861 70.808 70.606 71.054 0 158 35 6 0 0 0 0.00040604 3 42243 58.172 58.172 1 1.9633 1.9935 0 16703000 4662000 12041000 17599 1769 6655 6817 27527;27528;27529 27527 IPSPLGYAAIPIK 13 1 0 Unmodified _IPSPLGYAAIPIK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.4105 2 670.402838 1338.79112 74741.93 0.84651 0.0005675 0.27148 0.000182 1.118 0.00074951 670.403186333306 674.409796928595 112.57 0.58488 112.57 112.29 112.88 0 260 43 8 0 0 0 3.8549E-06 2 71094 107.83 89.051 1 1.1106 1.2039 0 44553000 20624000 23929000 17600 2133 6656 6818 27530;27531 27531 IPSPLGYAAIPIK 13 1 0 Unmodified _IPSPLGYAAIPIK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.4103 2 670.402838 1338.79112 75189.09 0.94464 0.00063329 0.16794 0.00011258 1.1126 0.00074587 670.403118013396 674.409744345989 111.95 0.60231 111.95 111.67 112.27 0 249 44 8 0 0 0 1.4334E-18 2 72338 138.23 114.2 1 1.1062 1.229 0 50106000 24002000 26104000 17601 2133 6656 6818 27532;27533 27533 IPSPLGYAAIPIK 13 1 0 Unmodified _IPSPLGYAAIPIK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.4106 2 670.402838 1338.79112 74711.26 0.80742 0.0005413 0.25596 0.0001716 1.0634 0.00071289 670.904507930744 674.409958328854 123.83 0.51363 123.83 123.58 124.1 -7.6294E-06 130 21 8 0 0 0 6.7118E-06 2 74059 104.22 86.402 1 1.2755 0.99273 0 12403000 5399700 7003100 17602 2133 6656 6818 27534;27535 27535 IPSPLGYAAIPIK 13 1 0 Unmodified _IPSPLGYAAIPIK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.9114 2 670.402838 1338.79112 74747.61 0.76885 0.00051544 0.25702 0.00017231 1.0259 0.00068775 670.403072109891 674.409967367169 123.63 0.58572 123.63 123.38 123.97 0 132 22 9 0 0 0 5.6068E-14 2 72989 135.55 109.99 1 1.2778 1.0449 0 12622000 5517900 7104300 17603 2133 6656 6818 27536;27537 27537 IPVDTYNNILTVLK 14 1 0 Unmodified _IPVDTYNNILTVLK_ 0 0 0 Q96QK1;Q5HYM2;Q53FR4 Q96QK1 Q96QK1 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.9658 2 801.958706 1601.90286 NaN NaN NaN -0.10967 -8.7953E-05 NaN NaN NaN NaN 119.89 0.57845 119.89 119.49 120.07 0 0 0 0 4.8544E-06 1 77167 95.094 82.002 1 NaN NaN 0 5396400 0 5396400 17604 1985 6657 6819 27538 27538 IPVDTYNNILTVLK 14 1 0 Unmodified _IPVDTYNNILTVLK_ 0 0 0 Q96QK1;Q5HYM2;Q53FR4 Q96QK1 Q96QK1 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 805.9666 2 801.958706 1601.90286 70741.4 0.94396 0.00075702 0.029433 2.3604E-05 0.9734 0.00078062 802.460478047161 805.965788888567 119.31 0.57425 119.31 118.99 119.57 7.6294E-06 107 39 6 0 0 0 0.00015261 2 78626 76.326 76.326 1 2.9501 2.9757 0 7833200 2106900 5726400 17605 1985 6657 6819 27539;27540 27539 IPVQALLHLR 10 0 1 Unmodified _IPVQALLHLR_ 0 0 0 Q0EFC6;B4DYK6;A0A024RCR2;P36915;A8MPZ0;Q86Z07;B4DWZ0;A0A140T8Y2;Q96QB8;B7ZAS6;B4DNS8;Q6P458 Q0EFC6 Q0EFC6 HSR1;GNL1 Guanine nucleotide-binding protein-like 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 390.5845 3 387.248514 1158.72371 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.33 1 93.33 92.83 93.83 0 0 0 0 0.019733 1 57922 61.65 43.83 1 17606 366 6658 6820 27541 27541 IPVSGPFLVK 10 1 0 Unmodified _IPVSGPFLVK_ 0 0 0 O00425;F8WD15 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.8284 2 528.826235 1055.63792 85011.55 0.73397 0.00038814 0.043411 2.2957E-05 0.77738 0.0004111 528.826244602342 532.833215125845 91.184 0.58464 91.184 90.902 91.487 0 220 52 6 0 0 0 0.041181 1 56340 38.303 11.888 1 1.5615 1.6918 0 38887000 15772000 23115000 17607 1364 6659 6821 27542 27542 IPWFQYPIIYDIR 13 0 1 Unmodified _IPWFQYPIIYDIR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5H0C5 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.4667 2 862.463958 1722.91336 64599.71 1.0461 0.00090222 0.65934 0.00056866 1.7054 0.0014709 862.464411641076 867.969889526573 133.21 0.43378 133.21 132.99 133.43 0 91 13 10 0 0 0 2.1987E-30 3 87058 170.52 145.67 1 1.1398 1.2622 0 62724000 29983000 32742000 17608 1328 6660 6822 27543;27544;27545 27544 IPWFQYPIIYDIR 13 0 1 Unmodified _IPWFQYPIIYDIR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5H0C5 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.4651 2 862.463958 1722.91336 64734.69 0.94537 0.00081535 0.67913 0.00058572 1.6245 0.0014011 862.966285136163 867.969912318329 132.92 0.63597 132.92 132.59 133.23 -1.5259E-05 242 32 10 0 0 0 5.3247E-05 2 89005 116.55 94.875 1 1.179 1.3699 0 63300000 29397000 33904000 17609 1328 6660 6822 27546;27547 27547 IPYTTVLR 8 0 1 Unmodified _IPYTTVLR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7914 2 481.78711 961.559667 86118.42 0.11128 5.3611E-05 0.17585 8.4721E-05 0.28712 0.00013833 481.787176180613 486.791192528092 70.2 0.80013 70.2 69.939 70.739 0 385 70 9 0 0 0 0.0050709 2 40751 91.626 38.943 1 0.68967 0.81735 0 504390000 294160000 210220000 17610 167 6661 6823 27548;27549 27549 IPYTTVLR 8 0 1 Unmodified _IPYTTVLR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7912 2 481.78711 961.559667 86291.56 0.31898 0.00015368 0.33014 0.00015906 0.64912 0.00031274 481.787281403468 486.791253501174 68.834 0.8493 68.834 68.66 69.509 0 337 72 10 0 0 0 0.0050709 2 40886 91.626 45.256 1 0.70814 0.83179 0 878600000 492110000 386490000 17611 167 6661 6823 27550;27551 27551 IPYTTVLR 8 0 1 Unmodified _IPYTTVLR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.7909 2 481.78711 961.559667 86700.53 0.040152 1.9345E-05 0.33793 0.00016281 0.37808 0.00018215 481.787179403993 486.791287690209 80.412 1.6464 80.412 79.853 81.499 0 374 108 8 0 0 0 0.019774 2 43364 58.917 22.386 1 0.90164 0.77633 0 57529000 30351000 27178000 17612 167 6661 6823 27552;27553 27552 IPYTTVLR 8 0 1 Unmodified _IPYTTVLR_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.791 2 481.78711 961.559667 86832.76 0.30662 0.00014772 0.084821 4.0866E-05 0.39144 0.00018859 481.787047477279 486.791167239695 80.534 1.1939 80.534 80.001 81.195 0 345 79 8 0 0 0 0.017078 2 42597 60.682 24.496 1 0.92866 0.81015 0 47462000 23167000 24295000 17613 167 6661 6823 27554;27555 27554 IQAAASTPTNATAASDANTGDR 22 0 1 Unmodified _IQAAASTPTNATAASDANTGDR_ 0 0 0 Q6FI27;B5BUC0;P49841 Q6FI27 Q6FI27 GSK3B Glycogen synthase kinase-3 beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1058.0031 2 1052.4987 2102.98285 NaN NaN NaN -0.84507 -0.00088944 NaN NaN NaN NaN 34.734 0.15991 34.734 34.69 34.85 0 0 0 0 6.581E-05 1 17625 53.3 33.194 1 NaN NaN 0 2807800 0 2807800 17614 1078 6662 6824 27556 27556 IQAELAVILK 10 1 0 Unmodified _IQAELAVILK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.3574 2 549.350074 1096.6856 82978.73 0.8146 0.0004475 0.45724 0.00025119 1.2718 0.00069869 549.349937449928 553.357230413046 115.35 0.50265 115.35 115.14 115.64 0 67 23 6 0 0 0 0.020901 2 67511 46.462 35.445 1 0.98809 0.78188 0 5028200 2153900 2874300 17615 186;1747;718 6663 6825 27557;27558 27558 IQAELAVILK 10 1 0 Unmodified _IQAELAVILK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.3573 2 549.350074 1096.6856 82789.16 0.65169 0.00035801 0.12854 7.0612E-05 0.78023 0.00042862 549.349990205708 553.35718445013 115.15 0.44602 115.15 114.87 115.31 -7.6294E-06 51 21 4 0 0 0 0.044039 1 66371 37.153 29.11 1 1.3242 1.0817 0 8109100 3067900 5041200 17616 186;1747;718 6663 6825 27559 27559 IQAIAWAR 8 0 1 Unmodified _IQAIAWAR_ 0 0 0 P17812;B4E1E0;B4DMB5 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.7717 2 464.771794 927.529036 NaN NaN NaN -0.061242 -2.8464E-05 NaN NaN NaN NaN 67.84 0.63329 67.84 67.546 68.179 0 0 0 0 0.040797 1 39243 53.554 22.886 1 NaN NaN 0 3984400 3984400 0 17617 1494 6664 6826 27560 27560 IQAIAWAR 8 0 1 Unmodified _IQAIAWAR_ 0 0 0 P17812;B4E1E0;B4DMB5 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.7758 2 464.771794 927.529036 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.859 1 67.859 67.359 68.359 0 0 0 0 0.017498 1 39276 68.915 21.87 1 17618 1494 6664 6826 27561 27561 IQAIAWAR 8 0 1 Unmodified _IQAIAWAR_ 0 0 0 P17812;B4E1E0;B4DMB5 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.7715 2 464.771794 927.529036 92935.84 0.32484 0.00015098 -0.054461 -2.5312E-05 0.27038 0.00012567 464.77180045172 469.775828570387 66.556 0.65633 66.556 66.235 66.891 0 157 53 4 0 0 0 0.011877 2 39452 68.915 29.291 1 1.4089 1.3985 0 11949000 4428500 7520400 17619 1494 6664 6826 27562;27563 27563 IQALPTVPVTEEHVGSGLECPVCK 24 1 0 Unmodified _IQALPTVPVTEEHVGSGLECPVCK_ 0 0 0 O60372;Q9NPN4;K7EIY6;A8K0Q1;A0A024R206;Q9BV68 O60372 O60372 RNF126 E3 ubiquitin-protein ligase RNF126 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.1148 3 874.108496 2619.30366 NaN NaN NaN -0.13732 -0.00012003 NaN NaN NaN NaN 96.125 0.34357 96.125 95.857 96.2 0 0 0 0 0.031534 1 58535 24.896 10.734 1 NaN NaN 0 4947600 0 4947600 17620 100 6665 6827 27564 27564 IQALPTVPVTEEHVGSGLECPVCK 24 1 0 Unmodified _IQALPTVPVTEEHVGSGLECPVCK_ 0 0 0 O60372;Q9NPN4;K7EIY6;A8K0Q1;A0A024R206;Q9BV68 O60372 O60372 RNF126 E3 ubiquitin-protein ligase RNF126 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 876.7836 3 874.108496 2619.30366 65331.7 0.64074 0.00056007 0.71696 0.0006267 1.3577 0.0011868 874.776086151392 877.114632102879 109.06 0.29096 109.06 108.92 109.21 0 56 14 8 0 0 0 0.0010527 2 62744 26.417 26.417 1 1.2284 1.0004 0 2672300 967330 1705000 17621 100 6665 6827 27565;27566 27565 IQALPTVPVTEEHVGSGLECPVCK 24 1 0 Unmodified _IQALPTVPVTEEHVGSGLECPVCK_ 0 0 0 O60372;Q9NPN4;K7EIY6;A8K0Q1;A0A024R206;Q9BV68 O60372 O60372 RNF126 E3 ubiquitin-protein ligase RNF126 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 874.4448 3 874.108496 2619.30366 65391.7 0.35819 0.0003131 1.0333 0.0009032 1.3915 0.0012163 874.443492741851 876.78072205053 108.95 0.39939 108.95 108.75 109.15 -7.6294E-06 61 18 7 0 0 0 0.03863 1 61771 12.314 12.314 1 0.90778 0.73701 0 2864000 1455200 1408900 17622 100 6665 6827 27567 27567 IQALQQQADEAEDR 14 0 1 Unmodified _IQALQQQADEAEDR_ 0 0 0 B4DVY2;V9HW56;P67936;B4DTB1 B4DVY2 B4DVY2 HEL-S-108;TPM4 Tropomyosin alpha-4 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 812.8945 2 807.88954 1613.76453 68419.07 0.35095 0.00028353 0.23066 0.00018635 0.58161 0.00046988 807.889980296276 812.893677380169 46.334 0.58687 46.334 46.075 46.662 0 144 33 6 0 0 0 3.8972E-05 2 21789 94.767 78.878 1 1.8701 1.6581 0 2397700 838260 1559400 + 17623 1043 6666 6828 27568;27569 27568 IQAVIDSGVCR 11 0 1 Unmodified _IQAVIDSGVCR_ 0 0 0 B4DII5;B4DWX3;O60684;O15131;Q5TFJ7 B4DII5 B4DII5 KPNA6;KPNA5 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8245 2 609.31898 1216.62341 NaN NaN NaN -1.3053 -0.00079533 NaN NaN NaN NaN 53.073 0.27852 53.073 52.938 53.216 0 0 0 0 0.0027477 1 29693 71.614 38.236 1 NaN NaN 0 5148400 0 5148400 17624 980 6667 6829 27570 27570 IQAVLALSR 9 0 1 Unmodified _IQAVLALSR_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.8047 2 485.805834 969.597115 86684.23 0.13761 6.6852E-05 -0.85047 -0.00041316 -0.71286 -0.00034631 485.805096060597 490.809565342468 74.906 2.1941 74.906 73.399 75.593 0 625 189 5 0 0 0 0.00062596 4 43680 96.624 24.139 1 0.85091 0.87051 0 32769000 17645000 15124000 17625 1995 6668 6830 27571;27572;27573;27574 27573 IQAVLALSR 9 0 1 Unmodified _IQAVLALSR_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.8058 2 485.805834 969.597115 86638.38 0.17671 8.5848E-05 -0.21376 -0.00010384 -0.037044 -1.7996E-05 485.805546260653 490.809835081817 85.155 2.255 85.155 83.937 86.192 0 691 160 6 0 0 0 0.001292 2 46478 87.308 10.434 1 1.5225 1.2487 0 12432000 5117200 7314500 17626 1995 6668 6830 27575;27576 27576 IQAVLALSR 9 0 1 Unmodified _IQAVLALSR_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.8058 2 485.805834 969.597115 86645.76 0.37991 0.00018456 -0.29008 -0.00014092 0.089831 4.364E-05 485.805490293699 490.809815138799 85.269 2.3419 85.269 84.036 86.378 0 595 154 6 0 0 0 0.0013353 3 45632 86.744 19.514 1 1.526 1.2342 0 11605000 4727800 6877000 17627 1995 6668 6830 27577;27578;27579 27579 IQCPNQGCEAVYSSVSGLK 19 1 0 Unmodified _IQCPNQGCEAVYSSVSGLK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1053.4974 2 1048.99061 2095.96667 60515.23 0.15016 0.00015752 -0.34799 -0.00036504 -0.19783 -0.00020752 1049.49066099731 1053.4996731891 77.705 0.41557 77.705 77.497 77.912 7.6294E-06 128 31 6 0 0 0 1.5744E-05 3 45871 66.533 66.533 1 0.2975 0.30993 0 11651000 8024200 3626700 17628 1275 6669 6831 27580;27581;27582 27582 IQCPNQGCEAVYSSVSGLK 19 1 0 Unmodified _IQCPNQGCEAVYSSVSGLK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1048.9904 2 1048.99061 2095.96667 60766.45 0.33077 0.00034697 -0.4627 -0.00048537 -0.13193 -0.0001384 1048.99022449853 1052.99769997818 76.8 0.42424 76.8 76.556 76.981 0 128 31 6 0 0 0 8.8871E-06 3 46303 74.853 71.986 1 0.32554 0.33744 0 18759000 12675000 6083300 17629 1275 6669 6831 27583;27584;27585 27583 IQCPNQGCEAVYSSVSGLK 19 1 0 Unmodified _IQCPNQGCEAVYSSVSGLK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1049.4894 2 1048.99061 2095.96667 59523.91 0.29381 0.00030821 -0.18234 -0.00019127 0.11147 0.00011694 1049.49215451905 1053.49933827945 89.543 0.52918 89.543 89.306 89.836 0 225 33 9 0 0 0 0.00064689 1 49405 36.944 36.944 1 0.7483 0.58074 0 12782000 7146600 5635100 17630 1275 6669 6831 27586 27586 IQCPNQGCEAVYSSVSGLK 19 1 0 Unmodified _IQCPNQGCEAVYSSVSGLK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1049.4941 2 1048.99061 2095.96667 59088.81 0.010301 1.0805E-05 0.05789 6.0727E-05 0.068191 7.1532E-05 1049.49261104644 1053.49935499524 89.49 0.56857 89.49 89.258 89.827 0 245 36 10 0 0 0 0.00042241 1 48590 41.621 38.67 1 0.83978 0.69417 0 11796000 6824800 4971000 17631 1275 6669 6831 27587 27587 IQDIVGILR 9 0 1 Unmodified _IQDIVGILR_ 0 0 0 P46087;F5H5X6;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.8232 2 513.818941 1025.62333 84397.95 0.49624 0.00025498 -0.058769 -3.0197E-05 0.43747 0.00022478 513.818833753503 518.822958877569 97.206 1.0942 97.206 96.797 97.891 0 488 95 7 0 0 0 1.1998E-11 2 59307 153.78 117.9 1 1.0549 1.203 0 119820000 59290000 60526000 17632 1570 6670 6832 27588;27589 27589 IQDIVGILR 9 0 1 Unmodified _IQDIVGILR_ 0 0 0 P46087;F5H5X6;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.8185 2 513.818941 1025.62333 84442.56 0.48472 0.00024906 0.14186 7.289E-05 0.62658 0.00032195 513.818934436616 518.823045995151 96.334 1.1582 96.334 95.901 97.06 0 478 99 7 0 0 0 0.0010227 2 59840 91.069 62.85 1 1.0399 1.1984 0 224550000 108140000 116410000 17633 1570 6670 6832 27590;27591 27590 IQDIVGILR 9 0 1 Unmodified _IQDIVGILR_ 0 0 0 P46087;F5H5X6;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.8232 2 513.818941 1025.62333 84610.31 0.57331 0.00029458 -0.13253 -6.8097E-05 0.44078 0.00022648 513.818786956097 518.822951559486 110.15 1.2978 110.15 109.8 111.1 0 270 63 7 0 0 0 0.0043738 2 63449 69.423 38.134 1 1.1442 0.95879 0 25237000 11295000 13942000 17634 1570 6670 6832 27592;27593 27592 IQDIVGILR 9 0 1 Unmodified _IQDIVGILR_ 0 0 0 P46087;F5H5X6;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.8234 2 513.818941 1025.62333 84219.44 0.52812 0.00027136 -0.12001 -6.1665E-05 0.40811 0.00020969 513.81879589796 518.822950445305 109.92 1.1927 109.92 109.61 110.81 0 244 62 7 0 0 0 0.00096668 2 62407 91.853 55.668 1 1.0584 0.9232 0 36139000 17115000 19024000 17635 1570 6670 6832 27594;27595 27594 IQDLIDDK 8 1 0 Unmodified _IQDLIDDK_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.2557 2 480.25584 958.497126 87603.56 0.33485 0.00016081 0.018103 8.6941E-06 0.35295 0.00016951 480.255570115974 484.262947340042 48.804 0.79594 48.804 48.449 49.245 0 231 60 8 0 0 0 0.01158 2 26603 69.598 31.206 1 1.4831 1.631 0 54535000 21936000 32599000 17636 1763 6671 6833 27596;27597 27596 IQDPTEDAEAEDTPR 15 0 1 Unmodified _IQDPTEDAEAEDTPR_ 0 0 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.8771 2 843.876295 1685.73804 67899.42 0.94671 0.00079891 -0.33339 -0.00028134 0.61332 0.00051757 844.377489822753 848.880166335459 41.52 0.55109 41.52 41.267 41.818 0 242 47 7 0 0 0 5.4568E-07 2 21789 101.53 101.53 1 0.80808 0.8266 0 35575000 18558000 17017000 17637 1435 6672 6834 27598;27599 27599 IQDPTEDAEAEDTPR 15 0 1 Unmodified _IQDPTEDAEAEDTPR_ 0 0 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.3768 2 843.876295 1685.73804 66514.9 0.74498 0.00062867 -0.00054508 -4.5998E-07 0.74444 0.00062821 844.377807161553 848.880084423434 40.772 0.49588 40.772 40.524 41.02 0 167 35 7 0 0 0 9.344E-05 3 21953 82.85 80.211 1 0.8417 0.92148 0 32733000 20051000 12682000 17638 1435 6672 6834 27600;27601;27602 27602 IQDPTEDAEAEDTPR 15 0 1 Unmodified _IQDPTEDAEAEDTPR_ 0 0 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.8801 2 843.876295 1685.73804 67133.7 0.46016 0.00038831 0.22409 0.00018911 0.68425 0.00057742 843.876227887485 848.880513011463 48.646 0.50077 48.646 48.382 48.883 0 177 39 7 0 0 0 0.00074622 1 23740 50.897 45.051 1 1.6728 1.4013 0 4013600 1399000 2614600 17639 1435 6672 6834 27603 27603 IQDPTEDAEAEDTPR 15 0 1 Unmodified _IQDPTEDAEAEDTPR_ 0 0 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.881 2 843.876295 1685.73804 NaN NaN NaN 0.097638 8.2394E-05 NaN NaN NaN NaN 49.288 0.49273 49.288 49.009 49.502 -3.8147E-06 0 0 0 0.019137 1 23456 43.03 36.79 1 NaN NaN 0 2210800 0 2210800 17640 1435 6672 6834 27604 27604 IQDWYDK 7 1 0 Unmodified _IQDWYDK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.2297 2 484.229625 966.444697 NaN NaN NaN 0.092331 4.4709E-05 NaN NaN NaN NaN 42.178 0.93299 42.178 41.801 42.734 0 0 0 0 0.036402 1 22175 65.038 36.139 1 NaN NaN 0 537890000 537890000 0 + 17641 1165 6673 6835 27605 27605 IQDWYDK 7 1 0 Unmodified _IQDWYDK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.23 2 484.229625 966.444697 NaN NaN NaN 0.07341 3.5548E-05 NaN NaN NaN NaN 40.844 1.4298 40.844 40.484 41.914 0 0 0 0 0.02887 1 21711 87.754 37.73 1 NaN NaN 0 188170000 188170000 0 + 17642 1165 6673 6835 27606 27606 IQDWYDK 7 1 0 Unmodified _IQDWYDK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.2296 2 484.229625 966.444697 NaN NaN NaN 0.41744 0.00020214 NaN NaN NaN NaN 48.04 1.8263 48.04 47.562 49.388 0 0 0 0 0.02913 2 23627 87.323 60.72 1 NaN NaN 0 17496000 17496000 0 + 17643 1165 6673 6835 27607;27608 27608 IQDWYDK 7 1 0 Unmodified _IQDWYDK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.2297 2 484.229625 966.444697 NaN NaN NaN 0.21178 0.00010255 NaN NaN NaN NaN 48.389 1.9833 48.389 47.741 49.724 -3.8147E-06 0 0 0 0.032238 2 23161 75.109 53.955 1 NaN NaN 0 10745000 10745000 0 + 17644 1165 6673 6835 27609;27610 27610 IQDYDVSLDK 10 1 0 Unmodified _IQDYDVSLDK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.2954 2 598.295693 1194.57683 78534.25 0.58753 0.00035152 0.27629 0.0001653 0.86382 0.00051682 598.295693346249 602.302849768863 56.569 0.61993 56.569 56.381 57.001 -3.8147E-06 207 56 6 0 0 0 4.6609E-08 2 31838 116.52 78.969 1 0.76372 0.75168 0 19812000 11055000 8756700 17645 1954 6674 6836 27611;27612 27612 IQDYDVSLDK 10 1 0 Unmodified _IQDYDVSLDK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.2963 2 598.295693 1194.57683 77885.43 0.49042 0.00029342 0.06877 4.1145E-05 0.55919 0.00033456 598.295351634797 602.30280357801 55.741 0.63641 55.741 55.495 56.132 0 176 50 5 0 0 0 1.2036E-05 1 31998 103.7 77.316 1 0.80572 0.82594 0 17633000 10021000 7612000 17646 1954 6674 6836 27613 27613 IQDYDVSLDK 10 1 0 Unmodified _IQDYDVSLDK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.2954 2 598.295693 1194.57683 78631.2 0.69695 0.00041698 -0.34387 -0.00020574 0.35308 0.00021124 598.295498863207 602.302437290311 65.953 0.69815 65.953 65.585 66.283 0 205 48 5 0 0 0 0.040069 1 34093 38.75 28.519 1 1.0178 0.80955 0 2968400 1466400 1501900 17647 1954 6674 6836 27614 27614 IQEENVIPR 9 0 1 Unmodified _IQEENVIPR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.3016 2 549.301113 1096.58767 82484.48 0.51129 0.00028085 -0.14039 -7.7117E-05 0.3709 0.00020374 549.301185621217 554.305092059944 49.548 0.49297 49.548 49.316 49.809 -3.8147E-06 129 30 6 0 0 0 0.00062278 2 27260 96.668 30.317 1 2.0459 2.2718 0 70717000 26231000 44485000 17648 1207 6675 6837 27615;27616 27616 IQEENVIPR 9 0 1 Unmodified _IQEENVIPR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.3054 2 549.301113 1096.58767 82258.38 0.71959 0.00039527 -0.146 -8.0196E-05 0.57359 0.00031507 549.301379033584 554.305088290903 48.152 0.54436 48.152 47.946 48.491 0 126 37 5 0 0 0 0.00042467 2 26858 99.442 28.062 1 1.9178 2.2152 0 70076000 29793000 40283000 17649 1207 6675 6837 27617;27618 27617 IQEENVIPR 9 0 1 Unmodified _IQEENVIPR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.2958 2 549.301113 1096.58767 NaN NaN NaN -0.55573 -0.00030526 NaN NaN NaN NaN 57.617 0.38062 57.617 57.485 57.866 0 0 0 0 0.014214 1 28555 63.419 23.417 1 NaN NaN 0 811990 811990 0 17650 1207 6675 6837 27619 27619 IQEHFNK 7 1 0 Unmodified _IQEHFNK_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24;Q9HBZ9;Q7Z4W5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.2448 2 458.237784 914.461016 90560.52 0.18815 8.6216E-05 -0.58092 -0.0002662 -0.39278 -0.00017999 458.237817272838 462.244465500616 17.668 0.31682 17.668 17.577 17.894 -1.9073E-06 26 10 5 0 0 0 0.026488 1 4790 88.029 56.093 1 2.42 2.5286 0 11886000 3473800 8412000 17651 593 6676 6838 27620 27620 IQEIIEQLDVTTSEYEK 17 1 0 Unmodified _IQEIIEQLDVTTSEYEK_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z5E7 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1023.5223 2 1019.51497 2037.01538 NaN NaN NaN 0.63111 0.00064343 NaN NaN NaN NaN 108.06 0.22649 108.06 107.94 108.17 0 0 0 0 0.0036463 1 67357 52.555 23.214 1 NaN NaN 0 3813600 0 3813600 17652 143 6677 6839 27621 27621 IQELEDLLAK 10 1 0 Unmodified _IQELEDLLAK_ 0 0 0 P20700;E9PBF6;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.3323 2 586.332079 1170.6496 79664.28 0.70008 0.00041048 0.054699 3.2072E-05 0.75478 0.00044255 586.332079985602 590.339119644228 96.716 1.2122 96.716 96.414 97.626 0 441 105 6 0 0 0 4.9722E-10 2 59096 135.86 68.4 1 1.0717 1.2103 0 81180000 31964000 49215000 17653 1502 6678 6840 27622;27623 27622 IQELEDLLAK 10 1 0 Unmodified _IQELEDLLAK_ 0 0 0 P20700;E9PBF6;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.3331 2 586.332079 1170.6496 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.318 1 98.318 97.818 98.818 7.6294E-06 0 0 0 0.00030223 1 60086 76.679 17.762 1 17654 1502 6678 6840 27624 27624 IQELEDLLAK 10 1 0 Unmodified _IQELEDLLAK_ 0 0 0 P20700;E9PBF6;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.3322 2 586.332079 1170.6496 79688.22 0.75712 0.00044392 0.002698 1.5819E-06 0.75982 0.0004455 586.332053905944 590.339104729545 96.094 1.4947 96.094 95.623 97.118 0 515 126 6 0 0 0 4.7334E-08 2 59769 116.37 51.951 1 1.0947 1.2426 0 141230000 67695000 73533000 17655 1502 6678 6840 27625;27626 27625 IQELEDLLAK 10 1 0 Unmodified _IQELEDLLAK_ 0 0 0 P20700;E9PBF6;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.3331 2 586.332079 1170.6496 79909.01 0.68075 0.00039915 0.24493 0.00014361 0.92568 0.00054275 586.332133341947 590.339238646852 109.96 1.07 109.96 109.7 110.77 7.6294E-06 225 54 6 0 0 0 0.0011014 2 63596 76.17 40.874 1 1.123 0.892 0 10091000 4644400 5447000 17656 1502 6678 6840 27627;27628 27628 IQELEDLLAK 10 1 0 Unmodified _IQELEDLLAK_ 0 0 0 P20700;E9PBF6;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.3397 2 586.332079 1170.6496 80426.46 0.69994 0.0004104 0.12876 7.5496E-05 0.8287 0.00048589 586.332114515186 590.339167533826 109.92 1.4051 109.92 109.53 110.93 0 280 73 7 0 0 0 0.00060252 2 62459 84.213 29.572 1 1.026 0.82394 0 14836000 7656500 7179300 17657 1502 6678 6840 27629;27630 27629 IQELEMQAR 9 0 1 Oxidation (M) _IQELEM(ox)QAR_ IQELEM(1)QAR IQELEM(60.91)QAR 0 1 0 A0A0H3W5T2;B4DNC7;A8K5K3;O75030;B1AKB5;A0A024RCY3;B4DPL3;B0QYS6;B0QYS7;P19484 A0A0H3W5T2 A0A0H3W5T2 MITF;TFEB Microphthalmia-associated transcription factor;Transcription factor EB MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.2887 2 567.284605 1132.55466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.158 1 26.158 25.658 26.658 -1.9073E-06 0 0 0 0.0058876 1 11636 60.91 15.192 1 17658 536 6679 6841 27631 27631 396 IQELENLPGSLAGDLR 16 0 1 Unmodified _IQELENLPGSLAGDLR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.9669 2 862.962508 1723.91046 64180.27 0.94526 0.00081573 1.5883 0.0013706 2.5336 0.0021864 862.964460780879 867.966824072991 110.14 0.64482 110.14 109.89 110.54 0 236 44 7 0 0 0 9.5761E-34 2 69059 155.66 127.38 1 0.55054 0.61242 0 76640000 48811000 27828000 17659 695 6680 6842 27632;27633 27632 IQELENLPGSLAGDLR 16 0 1 Unmodified _IQELENLPGSLAGDLR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 863.4619 2 862.962508 1723.91046 64600.7 0.70206 0.00060585 0.066066 5.7013E-05 0.76812 0.00066286 862.962525969399 867.966857029939 121.49 0.66452 121.49 121.31 121.97 0 156 33 7 0 0 0 8.2088E-05 2 72289 80.96 60.007 1 1.9209 1.5713 0 13543000 4363900 9179200 17660 695 6680 6842 27634;27635 27635 IQELENLPGSLAGDLR 16 0 1 Unmodified _IQELENLPGSLAGDLR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 862.9633 2 862.962508 1723.91046 65337.97 0.59462 0.00051314 0.079163 6.8315E-05 0.67379 0.00058145 863.463819167838 867.966855330445 121.3 0.72833 121.3 121.11 121.83 7.6294E-06 168 38 7 0 0 0 0.021515 2 71275 27.967 24.964 1 1.8697 1.5735 0 17348000 6184900 11163000 17661 695 6680 6842 27636;27637 27637 IQELENLPGSLPPDLR 16 0 1 Unmodified _IQELENLPGSLPPDLR_ 0 0 0 P51531;A0A0U1RQZ9;F6VDE0 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.9869 2 895.985983 1789.95741 64735.3 0.62725 0.000562 0.056865 5.095E-05 0.68411 0.00061295 895.985851488481 900.989980668497 108.27 0.55012 108.27 107.92 108.47 0 88 39 4 0 0 0 0.00023516 3 69145 76.073 67.343 1 0.88488 0.8803 0 7212500 4079400 3133100 17662 1595 6681 6843 27638;27639;27640 27638 IQETQAELPR 10 0 1 Unmodified _IQETQAELPR_ 0 0 0 Q14566;Q4ZG57 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.8224 2 592.817127 1183.6197 79438.69 0.84346 0.00050002 0.38031 0.00022546 1.2238 0.00072548 592.817120740201 597.821131964047 40.956 0.45184 40.956 40.687 41.138 0 178 38 7 0 0 0 1.444E-05 1 21386 101.9 79.659 1 1.9631 2.033 0 23080000 6766900 16313000 17663 1734 6682 6844 27641 27641 IQETQAELPR 10 0 1 Unmodified _IQETQAELPR_ 0 0 0 Q14566;Q4ZG57 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.8219 2 592.817127 1183.6197 81183.95 0.25459 0.00015093 0.37668 0.0002233 0.63127 0.00037423 592.817449676336 597.821321433508 47.658 0.43577 47.658 47.422 47.858 0 110 31 6 0 0 0 0.047222 1 22590 36.585 18.145 1 1.0051 0.87965 0 1835400 828210 1007200 17664 1734 6682 6844 27642 27642 IQEVADELQK 10 1 0 Unmodified _IQEVADELQK_ 0 0 0 P18085;C9JPM4;C9JAK5 P18085 P18085 ARF4 ADP-ribosylation factor 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8206 2 586.81151 1171.60847 NaN NaN NaN -0.11191 -6.5673E-05 NaN NaN NaN NaN 44.252 0.80003 44.252 43.878 44.678 0 0 0 0 0.00011413 1 23580 95.358 30.112 1 NaN NaN 0 54903000 0 54903000 17665 1498 6683 6845 27643 27643 IQFENNEDQDVNPLK 15 1 0 Unmodified _IQFENNEDQDVNPLK_ 0 0 0 Q8N516;Q4LE38;O95163;F5H2T0;B3KXE7;B4E3I9;Q68DI5 Q8N516 Q8N516 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.9388 2 901.931405 1801.84826 63624.77 0.78851 0.00071118 0.23714 0.00021388 1.0256 0.00092506 901.931896490395 905.938633203803 77.564 0.40409 77.564 77.335 77.739 0 92 33 4 0 0 0 1.6187E-05 3 46834 88.338 88.338 1 1.3871 1.3847 0 14265000 6165200 8099900 17666 1419 6684 6846 27644;27645;27646 27644 IQFKPDDGISPER 13 1 1 Unmodified _IQFKPDDGISPER_ 0 0 1 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2596 3 501.259696 1500.75726 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.059 1 54.059 53.559 54.559 0 0 0 0 0.0019715 1 30889 59.607 44.508 1 17667 245 6685 6847 27647 27647 IQGLTVEQAEAVVR 14 0 1 Unmodified _IQGLTVEQAEAVVR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.9251 2 756.922655 1511.83076 72255.71 0.78994 0.00059793 -0.80339 -0.0006081 -0.013445 -1.0177E-05 757.423521005345 761.926363774945 90.255 0.68578 90.255 89.914 90.6 0 128 61 4 0 0 0 0.00011216 1 55707 83.182 51.174 1 2.1337 2.1398 0 17752000 5428900 12323000 17668 1729 6686 6848 27648 27648 IQGLTVEQAEAVVR 14 0 1 Unmodified _IQGLTVEQAEAVVR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.9266 2 756.922655 1511.83076 70507.36 0.52635 0.00039841 0.35798 0.00027096 0.88433 0.00066937 756.923664817767 761.926392878482 104.72 0.51748 104.72 104.4 104.92 0 77 28 4 0 0 0 0.036455 1 58715 29.303 19.981 1 1.2185 1.0328 0 3063300 1821300 1242000 17669 1729 6686 6848 27649 27649 IQIASESSGIPERPCVLTGTPESIEQAK 28 1 1 Unmodified _IQIASESSGIPERPCVLTGTPESIEQAK_ 0 0 1 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1006.1901 3 999.844765 2996.51247 62099.68 0.6775 0.00067739 0.37797 0.00037791 1.0555 0.0010553 1000.17885843637 1006.18700461646 93.852 0.35101 93.852 93.653 94.004 0 93 31 6 0 0 0 0.00052506 3 56931 30.337 24.307 1 1.394 1.5151 0 15710000 6580300 9129900 17670 245 6687 6849 27650;27651;27652 27651 IQIEAIPLALQGR 13 0 1 Unmodified _IQIEAIPLALQGR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.4281 2 711.427376 1420.8402 72263.56 1.0188 0.00072477 -0.27008 -0.00019214 0.74868 0.00053263 711.427176390281 716.431211968718 114.01 0.68021 114.01 113.65 114.33 7.6294E-06 308 48 8 0 0 0 4.8147E-06 2 72153 106.62 106.62 1 1.0307 1.1472 0 78488000 39046000 39442000 17671 313 6688 6850 27653;27654 27654 IQIEAIPLALQGR 13 0 1 Unmodified _IQIEAIPLALQGR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.428 2 711.427376 1420.8402 72625.65 0.73368 0.00052196 -0.11154 -7.935E-05 0.62215 0.00044261 711.427323296709 716.431310668019 113.39 0.65837 113.39 113.06 113.72 0 304 45 8 0 0 0 7.257E-14 2 73449 134.84 134.84 1 1.0402 1.1982 0 73379000 35870000 37510000 17672 313 6688 6850 27655;27656 27656 IQIEAIPLALQGR 13 0 1 Unmodified _IQIEAIPLALQGR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 716.4317 2 711.427376 1420.8402 72015.3 0.85808 0.00061046 -0.14412 -0.00010253 0.71397 0.00050793 711.427281839032 716.431389958219 125.37 0.85458 125.37 125.05 125.91 0 197 34 10 0 0 0 1.1371E-08 2 75161 113.69 113.69 1 1.2379 1.0618 0 42045000 19229000 22816000 17673 313 6688 6850 27657;27658 27658 IQIEAIPLALQGR 13 0 1 Unmodified _IQIEAIPLALQGR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 716.4318 2 711.427376 1420.8402 71662.48 0.81086 0.00057687 -0.099756 -7.0969E-05 0.7111 0.0005059 711.427370337825 716.43140606609 125.15 0.77892 125.15 124.89 125.67 7.6294E-06 214 34 10 0 0 0 7.6128E-06 2 74117 103.08 103.08 1 1.1357 0.9907 0 44646000 20048000 24598000 17674 313 6688 6850 27659;27660 27660 IQINQEEER 9 0 1 Unmodified _IQINQEEER_ 0 0 0 P42696;A2A2V2;Q5TCT4 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.7913 2 579.791109 1157.56767 79110.41 0.72512 0.00042042 0.91857 0.00053258 1.6437 0.00095299 579.791032990803 584.795305692332 27.297 1.3573 27.297 26.268 27.625 0 197 80 8 0 0 0 1.031E-11 2 12501 155.1 82.45 1 0.82007 0.90853 0 63839000 33882000 29957000 17675 1566 6689 6851 27661;27662 27661 IQINQEEER 9 0 1 Unmodified _IQINQEEER_ 0 0 0 P42696;A2A2V2;Q5TCT4 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.7956 2 579.791109 1157.56767 78682.05 1.12 0.00064938 0.65328 0.00037877 1.7733 0.0010282 579.791111651177 584.795295639823 26.854 0.78362 26.854 26.468 27.252 0 113 38 8 0 0 0 8.384E-12 1 12209 156.62 90.543 1 0.8836 1.0075 0 98152000 49929000 48224000 17676 1566 6689 6851 27663 27663 IQINQEEER 9 0 1 Unmodified _IQINQEEER_ 0 0 0 P42696;A2A2V2;Q5TCT4 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.7957 2 579.791109 1157.56767 78979.29 0.38286 0.00022198 0.66292 0.00038435 1.0458 0.00060633 579.790997543066 584.795197244244 31.113 0.80278 31.113 30.673 31.476 1.9073E-06 192 50 8 0 0 0 0.0053447 1 13019 66.962 24.363 1 0.80044 0.67033 0 10197000 5553800 4642800 17677 1566 6689 6851 27664 27664 IQINQEEER 9 0 1 Unmodified _IQINQEEER_ 0 0 0 P42696;A2A2V2;Q5TCT4 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.7955 2 579.791109 1157.56767 78154.08 0.37925 0.00021988 0.2649 0.00015359 0.64415 0.00037347 579.790933902179 584.795190987341 31.263 0.5956 31.263 30.989 31.584 0 152 30 7 0 0 0 0.0049289 2 12620 68.016 21.281 1 0.8399 0.68569 0 9344600 5010200 4334400 17678 1566 6689 6851 27665;27666 27665 IQIPRPDDPSNQIK 14 1 1 Unmodified _IQIPRPDDPSNQIK_ 0 0 1 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H0Y394;C9J5E5;C9JIZ1;H7C0A4;Q5HYC5 A0A024R4E5 A0A024R4E5 HDLBP;DKFZp686L08115 Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.9689 3 540.96165 1619.86312 83691.06 0.37764 0.00020429 0.01784 9.6508E-06 0.39548 0.00021394 541.295670051408 546.969105193299 62.797 0.62786 62.797 62.426 63.054 0 262 56 6 0 0 0 0.0085334 1 36737 33.204 9.0131 1 2.0673 2.3649 0 22099000 6604700 15495000 17679 154 6690 6852 27667 27667 IQIVGLTELQSLAVGPR 17 0 1 Unmodified _IQIVGLTELQSLAVGPR_ 0 0 0 K7EPU3;Q9BT22 K7EPU3 K7EPU3 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.0353 2 897.527818 1793.04108 65288.54 0.86484 0.00077622 0.49481 0.0004441 1.3596 0.0012203 898.029251601238 902.532317981856 127.96 0.31889 127.96 127.8 128.12 0 97 18 8 0 0 0 6.5749E-18 3 83367 128.31 128.31 1 0.98238 1.0321 0 11645000 6005300 5639500 17680 1344 6691 6853 27668;27669;27670 27668 IQIVGLTELQSLAVGPR 17 0 1 Unmodified _IQIVGLTELQSLAVGPR_ 0 0 0 K7EPU3;Q9BT22 K7EPU3 K7EPU3 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 898.0304 2 897.527818 1793.04108 64795.43 0.81186 0.00072867 0.14109 0.00012663 0.95294 0.00085529 897.52782588354 902.531949964776 127.62 0.34806 127.62 127.44 127.78 -7.6294E-06 88 20 7 0 0 0 1.1853E-12 2 85198 117.93 117.93 1 1.1514 1.1307 0 14145000 6793100 7351500 17681 1344 6691 6853 27671;27672 27672 IQLEEYSNTR 10 0 1 Unmodified _IQLEEYSNTR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.814 2 626.812042 1251.60953 75746.71 0.70656 0.00044288 -0.55172 -0.00034582 0.15484 9.7058E-05 626.811510496174 631.815885037844 48.436 0.59934 48.436 48.128 48.727 0 270 46 8 0 0 0 4.7334E-08 2 26276 116.37 23.209 1 1.5954 1.8872 0 295700000 121420000 174280000 17682 1914 6692 6854 27673;27674 27673 IQLEEYSNTR 10 0 1 Unmodified _IQLEEYSNTR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.8169 2 626.812042 1251.60953 75843.17 0.80467 0.00050438 -0.70772 -0.00044361 0.096947 6.0768E-05 626.811612203593 631.815644040731 47.234 0.69391 47.234 47.011 47.705 0 267 51 8 0 0 0 3.1669E-10 2 26110 136.63 36.833 1 1.498 1.7368 0 306980000 123450000 183530000 17683 1914 6692 6854 27675;27676 27675 IQLEEYSNTR 10 0 1 Unmodified _IQLEEYSNTR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.8168 2 626.812042 1251.60953 76670.79 0.57481 0.0003603 -0.081421 -5.1036E-05 0.49339 0.00030926 626.812006336215 631.816074952103 56.116 0.67015 56.116 55.808 56.478 0 341 42 11 0 0 0 6.0976E-08 2 28145 113.62 16.191 1 1.5825 1.3625 0 56954000 21796000 35158000 17684 1914 6692 6854 27677;27678 27678 IQLEEYSNTR 10 0 1 Unmodified _IQLEEYSNTR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.817 2 626.812042 1251.60953 75504.09 0.65486 0.00041048 -0.11993 -7.5176E-05 0.53493 0.0003353 626.811986280096 631.816031413565 56.685 0.6785 56.685 56.316 56.994 -3.8147E-06 374 48 11 0 0 0 2.6362E-06 2 27841 110.76 20.472 1 1.6197 1.413 0 47976000 19410000 28566000 17685 1914 6692 6854 27679;27680 27679 IQLIFER 7 0 1 Unmodified _IQLIFER_ 0 0 0 Q15020;B4DRG9;F8VV04;B4E3R6 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.7739 2 459.774003 917.533452 NaN NaN NaN 0.0042176 1.9391E-06 NaN NaN NaN NaN 86.769 0.27531 86.769 86.6 86.876 0 0 0 0 0.031359 2 52356 83.614 8.3036 1 NaN NaN 0 3633900 3633900 0 17686 1748 6693 6855 27681;27682 27681 IQLIFER 7 0 1 Unmodified _IQLIFER_ 0 0 0 Q15020;B4DRG9;F8VV04;B4E3R6 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.7783 2 459.774003 917.533452 87934.11 0.55753 0.00025634 0.41672 0.0001916 0.97424 0.00044793 459.773764216118 464.777988811578 85.657 0.40874 85.657 85.512 85.92 0 117 29 8 0 0 0 0.010142 2 52721 120.65 10.33 1 2.4099 2.7657 0 52114000 13399000 38715000 17687 1748 6693 6855 27683;27684 27683 IQLLVFK 7 1 0 Unmodified _IQLLVFK_ 0 0 0 Q8N7H0;B3KNG0;B0QY90;B4DQF6;B3KPB9;B0QY89;Q9Y262;Q7Z5X3 Q8N7H0 Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.7907 2 430.783839 859.553125 NaN NaN NaN -0.22679 -9.7698E-05 NaN NaN NaN NaN 102.18 0.30219 102.18 102.03 102.33 -7.6294E-06 0 0 0 0.035117 1 64413 65.672 22.899 1 NaN NaN 0 3679800 0 3679800 17688 806 6694 6856 27685 27685 IQLPVVSK 8 1 0 Unmodified _IQLPVVSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2915 2 442.284203 882.553853 92399.06 0.061504 2.7202E-05 0.31783 0.00014057 0.37933 0.00016777 442.284374856133 446.291357079852 74.106 2.1864 74.106 73.441 75.627 0 703 188 5 0 0 0 0.0045746 5 43557 93.195 34.604 1 1.8362 2.042 0 60499000 21013000 39487000 17689 1569 6695 6857 27686;27687;27688;27689;27690 27687 IQLPVVSK 8 1 0 Unmodified _IQLPVVSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.291 2 442.284203 882.553853 91282.63 0.14222 6.29E-05 0.26694 0.00011806 0.40916 0.00018096 442.284344176215 446.291348971333 72.766 2.3672 72.766 72.071 74.438 0 713 204 5 0 0 0 0.0012436 5 43795 110.81 45.596 1 1.8434 2.0739 0 71459000 25146000 46312000 17690 1569 6695 6857 27691;27692;27693;27694;27695 27693 IQLPVVSK 8 1 0 Unmodified _IQLPVVSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.2845 2 442.284203 882.553853 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.862 1 73.862 73.362 74.362 -7.6294E-06 0 0 0 0.034147 1 44383 60.91 19.258 1 17691 1569 6695 6857 27696 27696 IQLPVVSK 8 1 0 Unmodified _IQLPVVSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 446.2911 2 442.284203 882.553853 90314.67 -0.0095706 -4.2329E-06 0.10187 4.5057E-05 0.092302 4.0824E-05 442.284208390595 446.291227746607 85.367 2.2515 85.367 84.168 86.419 -7.6294E-06 643 158 6 0 0 0 0.014899 3 46502 62.107 26.894 1 3.5164 2.8477 0 23876000 5358700 18517000 17692 1569 6695 6857 27697;27698;27699 27698 IQLPVVSK 8 1 0 Unmodified _IQLPVVSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 446.2911 2 442.284203 882.553853 90919.39 0.18819 8.3232E-05 0.075047 3.3192E-05 0.26323 0.00011642 442.284169085562 446.291225165328 85.4 2.4171 85.4 84.153 86.57 0 657 156 7 0 0 0 0.027337 1 45701 53.968 27.006 1 3.4866 2.7927 0 21700000 4856400 16844000 17693 1569 6695 6857 27700 27700 IQLQIQETLQR 11 0 1 Unmodified _IQLQIQETLQR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.3945 2 685.393533 1368.77251 73326.84 0.86621 0.0005937 0.0070818 4.8538E-06 0.87329 0.00059855 685.393993507892 690.397234220013 83.47 0.50008 83.47 83.158 83.658 0 117 36 4 0 0 0 0.0055447 2 51174 72.275 72.275 1 1.2201 1.3983 0 174200000 71627000 102570000 17694 39 6696 6858 27701;27702 27702 IQLQIQETLQR 11 0 1 Unmodified _IQLQIQETLQR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 690.3973 2 685.393533 1368.77251 75174.45 0.86221 0.00059095 0.063805 4.3731E-05 0.92601 0.00063468 685.393964798151 690.397264021555 96.864 0.43306 96.864 96.667 97.1 0 75 22 5 0 0 0 0.021381 1 54429 43.297 43.297 1 1.4828 1.2399 0 3782300 1516100 2266200 17695 39 6696 6858 27703 27703 IQLSSLIAAFQVTR 14 0 1 Unmodified _IQLSSLIAAFQVTR_ 0 0 0 Q6LES9;A8K3S0;Q59GW7;P40937;A8K4Z2 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.9564 2 773.951215 1545.88788 70401.39 1.1214 0.0008679 -0.012727 -9.8504E-06 1.1087 0.00085805 773.951014778936 779.456761731008 131.31 0.70691 131.31 130.97 131.67 0 208 46 6 0 0 0 9.9732E-05 2 85514 85.288 79.82 1 1.166 1.2256 0 11518000 5121700 6396600 17696 726 6697 6859 27704;27705 27704 IQLSSLIAAFQVTR 14 0 1 Unmodified _IQLSSLIAAFQVTR_ 0 0 0 Q6LES9;A8K3S0;Q59GW7;P40937;A8K4Z2 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.4518 2 773.951215 1545.88788 70553.63 0.88952 0.00068845 0.17203 0.00013314 1.0616 0.00082159 773.951074120276 778.955475869392 130.83 0.68469 130.83 130.48 131.17 0 250 48 6 0 0 0 3.4077E-06 2 87366 102.62 95.7 1 1.1508 1.1341 0 13084000 5556900 7527500 17697 726 6697 6859 27706;27707 27707 IQLVEEELDR 10 0 1 Unmodified _IQLVEEELDR_ 0 0 0 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;A0A087WWU8;D6R904;J3KN67;M1VPF4;P06753;H0YL80;K7EP68;H0YKP3;B4DTK3;C9IZA2;B4DVY2;V9HW56;P67936;B4DTB1;V9HW25;Q5TCU3;CON__Q3SX28;A7XZE4;Q5TCU8;P07951;K7ERG3;K7ENT6;B4DGC2;Q1ZYL5;F5H7S3;D9YZV7;H7BYY1;H0YK48;B7Z722;B7Z596;Q59GR8;H0YKX5;Q8TCG4;H0YNC7;Q15657;H0YL52;D9YZV5;D9YZV4;A0A0S2Z4G6;A0A0K0K1I0;A0A024R5W6;Q6ZN40;P09493 Q5HYB6;B4DVY2;Q1ZYL5 Q5HYB6 DKFZp686J1372;TPM3;TPM3-ROS1;TPM1;TPM4;HEL-S-108;HEL-S-273;TPM2;TPM2b Tyrosine-protein kinase receptor;Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain;Tropomyosin alpha-1 chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.3306 2 622.330067 1242.64558 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.576 1 77.576 77.076 78.076 0 0 0 0 3.4156E-08 1 45836 111.61 44.575 1 + 17698 562;1043;1094 6698 6860 27708 27708 IQLVEEELDR 10 0 1 Unmodified _IQLVEEELDR_ 0 0 0 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;A0A087WWU8;D6R904;J3KN67;M1VPF4;P06753;H0YL80;K7EP68;H0YKP3;B4DTK3;C9IZA2;B4DVY2;V9HW56;P67936;B4DTB1;V9HW25;Q5TCU3;CON__Q3SX28;A7XZE4;Q5TCU8;P07951;K7ERG3;K7ENT6;B4DGC2;Q1ZYL5;F5H7S3;D9YZV7;H7BYY1;H0YK48;B7Z722;B7Z596;Q59GR8;H0YKX5;Q8TCG4;H0YNC7;Q15657;H0YL52;D9YZV5;D9YZV4;A0A0S2Z4G6;A0A0K0K1I0;A0A024R5W6;Q6ZN40;P09493 Q5HYB6;B4DVY2;Q1ZYL5 Q5HYB6 DKFZp686J1372;TPM3;TPM3-ROS1;TPM1;TPM4;HEL-S-108;HEL-S-273;TPM2;TPM2b Tyrosine-protein kinase receptor;Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain;Tropomyosin alpha-1 chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3346 2 622.330067 1242.64558 NaN NaN NaN 0.30579 0.0001903 NaN NaN NaN NaN 76.612 0.79867 76.612 76.244 77.043 0 0 0 0 1.2373E-29 1 46133 156.92 109.72 1 NaN NaN 0 38124000 0 38124000 + 17699 562;1043;1094 6698 6860 27709 27709 IQLVEEELDR 10 0 1 Unmodified _IQLVEEELDR_ 0 0 0 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;A0A087WWU8;D6R904;J3KN67;M1VPF4;P06753;H0YL80;K7EP68;H0YKP3;B4DTK3;C9IZA2;B4DVY2;V9HW56;P67936;B4DTB1;V9HW25;Q5TCU3;CON__Q3SX28;A7XZE4;Q5TCU8;P07951;K7ERG3;K7ENT6;B4DGC2;Q1ZYL5;F5H7S3;D9YZV7;H7BYY1;H0YK48;B7Z722;B7Z596;Q59GR8;H0YKX5;Q8TCG4;H0YNC7;Q15657;H0YL52;D9YZV5;D9YZV4;A0A0S2Z4G6;A0A0K0K1I0;A0A024R5W6;Q6ZN40;P09493 Q5HYB6;B4DVY2;Q1ZYL5 Q5HYB6 DKFZp686J1372;TPM3;TPM3-ROS1;TPM1;TPM4;HEL-S-108;HEL-S-273;TPM2;TPM2b Tyrosine-protein kinase receptor;Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain;Tropomyosin alpha-1 chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.33 2 622.330067 1242.64558 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.554 1 76.554 76.054 77.054 0 0 0 0 1.623E-17 1 46216 139.96 61.468 1 + 17700 562;1043;1094 6698 6860 27710 27710 IQNWLSAK 8 1 0 Unmodified _IQNWLSAK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.2693 2 480.269084 958.523616 87225.56 0.032316 1.552E-05 0.22808 0.00010954 0.2604 0.00012506 480.269179041489 484.276226435948 58.74 0.75019 58.74 58.481 59.231 0 220 60 5 0 0 0 0.0078383 3 33337 81.215 36.494 1 1.2454 1.3877 0 61567000 23896000 37671000 17701 1914 6699 6861 27711;27712;27713 27712 IQNWLSAK 8 1 0 Unmodified _IQNWLSAK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.269 2 480.269084 958.523616 86778.96 0.23984 0.00011519 0.15111 7.2575E-05 0.39096 0.00018776 480.269045606471 484.276156221698 57.735 0.63654 57.735 57.353 57.99 0 203 52 5 0 0 0 0.0073633 2 33336 83.265 24.059 1 1.2372 1.3838 0 53563000 26982000 26581000 17702 1914 6699 6861 27714;27715 27715 IQNWLSAK 8 1 0 Unmodified _IQNWLSAK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.2763 2 480.269084 958.523616 87804.57 0.18326 8.8012E-05 0.20384 9.7896E-05 0.38709 0.00018591 480.269103747349 484.276156458879 67.688 0.96174 67.688 67.315 68.277 0 309 67 8 0 0 0 0.017218 1 35161 60.59 23.615 1 1.6372 1.2781 0 12023000 4351900 7671100 17703 1914 6699 6861 27716 27716 IQNWLSAK 8 1 0 Unmodified _IQNWLSAK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.2762 2 480.269084 958.523616 86712.13 0.21702 0.00010423 -0.066817 -3.209E-05 0.1502 7.2139E-05 480.268951552297 484.276036618089 68.054 0.95386 68.054 67.681 68.635 0 308 69 7 0 0 0 0.0073633 1 34666 83.265 24.059 1 1.6206 1.3332 0 10203000 4111600 6091400 17704 1914 6699 6861 27717 27717 IQPGSQQADFLDALIVSMDVIQHETIGK 28 1 0 Oxidation (M) _IQPGSQQADFLDALIVSM(ox)DVIQHETIGK_ IQPGSQQADFLDALIVSM(1)DVIQHETIGK IQPGSQQADFLDALIVSM(108.02)DVIQHETIGK 0 1 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1024.5261 3 1023.85689 3068.54885 58742 -0.15376 -0.00015743 -0.2622 -0.00026846 -0.41597 -0.00042589 1024.19128677935 1026.86179883142 133.34 0.38535 133.34 133.26 133.64 0 87 9 15 0 0 0 4.5288E-28 3 87307 108.02 108.02 1 0.59885 0.70772 0 392310000 234060000 158250000 17705 1476 6700 6862 27718;27719;27720 27718 1221 IQPGSQQADFLDALIVSMDVIQHETIGK 28 1 0 Oxidation (M) _IQPGSQQADFLDALIVSM(ox)DVIQHETIGK_ IQPGSQQADFLDALIVSM(1)DVIQHETIGK IQPGSQQADFLDALIVSM(151.12)DVIQHETIGK 0 1 0 P13010;Q53TC2;C9JZ81 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1026.8627 3 1023.85689 3068.54885 58802.82 -0.22093 -0.0002262 -0.85062 -0.00087091 -1.0716 -0.0010971 1024.19098786506 1026.86095261678 133.33 0.44081 133.33 133.19 133.63 0 81 10 12 0 0 0 1.1165E-66 2 89515 151.12 151.12 1 0.68878 0.81121 0 499900000 305840000 194070000 17706 1476 6700 6862 27721;27722 27722 1221 IQPVHILTSVSSLR 14 0 1 Unmodified _IQPVHILTSVSSLR_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;B7Z8K5;Q6R125;G3XAL2;Q59H64;E9PDH6 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.6415 3 517.306869 1548.89878 86141.73 0.51254 0.00026514 -0.023852 -1.2339E-05 0.48869 0.0002528 517.306730093748 520.977272033928 94.464 0.92951 94.464 94.042 94.972 -7.6294E-06 248 85 5 0 0 0 0.0069472 1 57261 40.801 40.801 1 0.95381 0.97573 0 33973000 15139000 18834000 17707 456 6701 6863 27723 27723 IQPVHILTSVSSLR 14 0 1 Unmodified _IQPVHILTSVSSLR_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;B7Z8K5;Q6R125;G3XAL2;Q59H64;E9PDH6 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.6414 3 517.306869 1548.89878 85348.29 0.47831 0.00024743 -0.013162 -6.8086E-06 0.46515 0.00024062 517.306814465701 520.642937341005 92.764 0.78309 92.764 92.358 93.141 0 239 65 6 0 0 0 5.6761E-05 2 57502 57.328 57.328 1 1.0088 1.1028 0 35875000 19094000 16781000 17708 456 6701 6863 27724;27725 27725 IQPVHILTSVSSLR 14 0 1 Unmodified _IQPVHILTSVSSLR_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;B7Z8K5;Q6R125;G3XAL2;Q59H64;E9PDH6 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.9772 3 517.306869 1548.89878 83740.99 0.44186 0.00022858 -0.0069844 -3.6131E-06 0.43488 0.00022496 517.306604226594 520.642937834457 106.53 0.5581 106.53 106.28 106.84 0 159 33 8 0 0 0 0.011598 3 60833 28.956 28.956 1 2.1072 1.7347 0 11783000 3429100 8353700 17709 456 6701 6863 27726;27727;27728 27727 IQPVHILTSVSSLR 14 0 1 Unmodified _IQPVHILTSVSSLR_ 0 0 0 A0A090N8E9;Q15910;F2YMM1;S4S3R8;B7Z8K5;Q6R125;G3XAL2;Q59H64;E9PDH6 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.6433 3 517.306869 1548.89878 83951.94 0.35659 0.00018447 0.089125 4.6105E-05 0.44572 0.00023057 517.641327821324 520.64294529697 106.2 0.5229 106.2 105.94 106.47 0 113 30 6 0 0 0 0.0015778 2 59739 44.294 44.294 1 1.6647 1.3506 0 12035000 3403200 8631900 17710 456 6701 6863 27729;27730 27730 IQQILTSTGFSDK 13 1 0 Unmodified _IQQILTSTGFSDK_ 0 0 0 A8K9K8;Q9UNQ2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.3823 2 719.382831 1436.75111 71828.05 0.51822 0.0003728 -0.32921 -0.00023683 0.189 0.00013596 719.382505344156 723.389679313519 77.169 0.65469 77.169 76.793 77.448 0 262 57 6 0 0 0 6.7586E-09 3 45444 118.4 118.4 1 0.87318 0.86417 0 25781000 13406000 12375000 17711 786 6702 6864 27731;27732;27733 27732 IQQILTSTGFSDK 13 1 0 Unmodified _IQQILTSTGFSDK_ 0 0 0 A8K9K8;Q9UNQ2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.8845 2 719.382831 1436.75111 72310.89 0.41425 0.000298 -0.12513 -9.0018E-05 0.28911 0.00020798 719.382880029189 723.389882607064 76.184 0.69114 76.184 75.78 76.471 7.6294E-06 251 62 6 0 0 0 9.3579E-06 2 45839 100.88 100.88 1 0.79206 0.81224 0 31967000 18600000 13367000 17712 786 6702 6864 27734;27735 27734 IQQILTSTGFSDK 13 1 0 Unmodified _IQQILTSTGFSDK_ 0 0 0 A8K9K8;Q9UNQ2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.3911 2 719.382831 1436.75111 71651.34 0.80357 0.00057807 -0.14558 -0.00010473 0.65799 0.00047335 719.382848557731 723.389576403007 88.2 0.9301 88.2 87.834 88.764 -7.6294E-06 249 56 8 0 0 0 0.00011999 3 48675 76.927 69.979 1 1.3198 1.0602 0 7810400 3480200 4330200 17713 786 6702 6864 27736;27737;27738 27738 IQQILTSTGFSDK 13 1 0 Unmodified _IQQILTSTGFSDK_ 0 0 0 A8K9K8;Q9UNQ2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.3836 2 719.382831 1436.75111 71549.94 0.59742 0.00042977 0.27343 0.0001967 0.87085 0.00062647 719.383225290278 723.389823241827 88.229 0.84915 88.229 87.914 88.763 0 220 48 7 0 0 0 0.00012326 2 47736 77.744 77.744 1 1.2218 0.9989 0 8271500 3736000 4535500 17714 786 6702 6864 27739;27740 27740 IQQLPDHFGPGPVNVVLR 18 0 1 Unmodified _IQQLPDHFGPGPVNVVLR_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3727 3 662.70217 1985.08468 76555.63 0.47513 0.00031487 0.21483 0.00014237 0.68995 0.00045723 663.036618201444 666.038509506408 102.62 0.65414 102.62 102.28 102.93 7.6294E-06 198 55 5 0 0 0 1.941E-05 1 63189 54.073 54.073 1 0.58491 0.59055 0 15495000 9754500 5740400 17715 2118 6703 6865 27741 27741 IQQLPDHFGPGPVNVVLR 18 0 1 Unmodified _IQQLPDHFGPGPVNVVLR_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.0389 3 662.70217 1985.08468 76466.11 0.57254 0.00037943 0.062897 4.1682E-05 0.63544 0.00042111 663.036547665931 666.038366181357 101.7 0.53592 101.7 101.38 101.91 0 176 42 5 0 0 0 2.0931E-05 1 64036 52.569 52.569 1 0.64439 0.64642 0 17541000 12039000 5502000 17716 2118 6703 6865 27742 27742 IQQLQEILQDLQK 13 1 0 Unmodified _IQQLQEILQDLQK_ 0 0 0 Q9P0K7;B4DNL3 Q9P0K7 Q9P0K7 RAI14 Ankycorbin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.9588 2 798.951412 1595.88827 72429.95 0.86931 0.00069454 -0.40429 -0.00032301 0.46501 0.00037152 799.452551757231 802.958497773184 118.71 0.37119 118.71 118.55 118.92 7.6294E-06 64 22 5 0 0 0 6.235E-06 1 78144 104.82 104.82 1 1.6665 1.6821 0 8097300 1858800 6238500 17717 2093 6704 6866 27743 27743 IQQLQEILQDLQK 13 1 0 Unmodified _IQQLQEILQDLQK_ 0 0 0 Q9P0K7;B4DNL3 Q9P0K7 Q9P0K7 RAI14 Ankycorbin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 802.9589 2 798.951412 1595.88827 NaN NaN NaN 0.20591 0.00016451 NaN NaN NaN NaN 132.02 0.38979 132.02 131.86 132.25 0 0 0 0 0.044968 1 80237 40.727 29.195 1 NaN NaN 0 1296900 0 1296900 17718 2093 6704 6866 27744 27744 IQQNTFTR 8 0 1 Unmodified _IQQNTFTR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98;O75369;A0A024R321 P21333;O75369 P21333 FLNA;FLNB Filamin-A;Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2711 2 504.267073 1006.51959 85851.04 0.026432 1.3329E-05 -0.048633 -2.4524E-05 -0.022201 -1.1195E-05 504.267083663639 509.271083022326 24.187 0.58004 24.187 24.014 24.594 1.9073E-06 84 25 7 0 0 0 1.1313E-05 2 9955 145.63 69.779 1 1.7018 1.8235 0 25184000 9228800 15955000 17719 1504;1402 6705 6867 27745;27746 27745 IQQNTFTR 8 0 1 Unmodified _IQQNTFTR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98;O75369;A0A024R321 P21333;O75369 P21333 FLNA;FLNB Filamin-A;Filamin-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.2713 2 504.267073 1006.51959 85779.73 0.31205 0.00015736 -0.70796 -0.000357 -0.39591 -0.00019964 504.266137641346 509.271012420049 26.935 0.46625 26.935 26.695 27.161 0 91 23 6 0 0 0 0.010755 2 10281 71.501 11.767 1 2.864 2.4334 0 5256900 1683900 3573000 17720 1504;1402 6705 6867 27747;27748 27747 IQQNTFTR 8 0 1 Unmodified _IQQNTFTR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98;O75369;A0A024R321 P21333;O75369 P21333 FLNA;FLNB Filamin-A;Filamin-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.2711 2 504.267073 1006.51959 83313.98 0.076848 3.8752E-05 -0.36949 -0.00018632 -0.29264 -0.00014757 504.266633910944 509.271002626425 26.955 0.5084 26.955 26.769 27.278 0 73 20 5 0 0 0 0.009998 1 9810 73.248 21.394 1 2.5614 2.1908 0 2870300 853130 2017200 17721 1504;1402 6705 6867 27749 27749 IQQQFSDLK 9 1 0 Unmodified _IQQQFSDLK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.7979 2 553.795663 1105.57677 82468.24 0.64189 0.00035547 0.41969 0.00023242 1.0616 0.0005879 553.795872439691 557.802968465205 43.467 0.47841 43.467 43.189 43.667 0 85 39 4 0 0 0 2.5262E-05 1 23237 113.71 48.454 1 0.87223 0.88815 0 17968000 10513000 7455400 17722 1418 6706 6868 27750 27750 IQQQFSDLK 9 1 0 Unmodified _IQQQFSDLK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.7963 2 553.795663 1105.57677 NaN NaN NaN 0.18423 0.00010202 NaN NaN NaN NaN 42.925 0.61388 42.925 42.587 43.2 0 0 0 0 2.0667E-07 1 23155 123.72 64.803 1 NaN NaN 0 16052000 16052000 0 17723 1418 6706 6868 27751 27751 IQQQFSDLK 9 1 0 Unmodified _IQQQFSDLK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.7956 2 553.795663 1105.57677 83608.23 0.28216 0.00015626 0.39629 0.00021946 0.67844 0.00037572 553.795637316326 557.802768293445 50.74 0.64713 50.74 50.425 51.072 -3.8147E-06 160 46 6 0 0 0 0.0043738 1 24331 69.423 14.874 1 0.89366 0.72311 0 1919300 1055400 863920 17724 1418 6706 6868 27752 27752 IQQSLSNPLSISLTDR 16 0 1 Unmodified _IQQSLSNPLSISLTDR_ 0 0 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.482 2 886.481065 1770.94758 66940.81 0.63242 0.00056063 0.27172 0.00024087 0.90414 0.0008015 886.481249592435 891.987508917148 105.75 0.4323 105.75 105.53 105.96 7.6294E-06 83 33 4 0 0 0 0.0026325 2 65500 40.066 40.066 1 0.82486 0.82349 0 8063600 4535700 3527900 17725 1928 6707 6869 27753;27754 27754 IQQSLSNPLSISLTDR 16 0 1 Unmodified _IQQSLSNPLSISLTDR_ 0 0 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.9845 2 886.481065 1770.94758 67640.48 0.65126 0.00057733 0.53 0.00046983 1.1813 0.0010472 886.481337887039 891.988105548769 105.15 0.39499 105.15 104.94 105.33 0 106 32 5 0 0 0 7.6391E-05 3 66682 81.431 81.431 1 0.671 0.67461 0 11071000 6661500 4409900 17726 1928 6707 6869 27755;27756;27757 27756 IQQSLSNPLSISLTDR 16 0 1 Unmodified _IQQSLSNPLSISLTDR_ 0 0 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 891.4868 2 886.481065 1770.94758 66892.34 0.41265 0.00036581 0.10875 9.6405E-05 0.5214 0.00046221 886.480996373613 891.48528084403 117.29 0.27673 117.29 117.13 117.41 0 64 12 8 0 0 0 0.0019975 2 69078 42.789 42.789 1 1.1508 0.96794 0 4455400 1925900 2529400 17727 1928 6707 6869 27758;27759 27759 IQQSLSNPLSISLTDR 16 0 1 Unmodified _IQQSLSNPLSISLTDR_ 0 0 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 891.9847 2 886.481065 1770.94758 66361.79 0.27292 0.00024194 0.52876 0.00046874 0.80168 0.00071068 886.481481531912 891.486017059573 117.08 0.35944 117.08 116.94 117.3 7.6294E-06 70 16 6 0 0 0 0.012186 1 67961 32.567 32.567 1 1.2147 1.0672 0 3608500 1883700 1724900 17728 1928 6707 6869 27760 27760 IQSALEEESVFAVTAVNASEK 21 1 0 Unmodified _IQSALEEESVFAVTAVNASEK_ 0 0 0 P57740 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1116.0704 2 1111.56298 2221.11141 57463.93 0.3839 0.00042673 -1.0048 -0.0011169 -0.62093 -0.0006902 1111.56216799762 1115.57011196809 123.01 0.3522 123.01 122.8 123.16 7.6294E-06 59 16 6 0 0 0 0.027345 1 72568 22.365 19.802 1 1.1226 0.88751 0 3941400 1750600 2190800 17729 1621 6708 6870 27761 27761 IQSGLGALSR 10 0 1 Unmodified _IQSGLGALSR_ 0 0 0 E9PIE3;Q969G5 E9PIE3 E9PIE3 PRKCDBP Protein kinase C delta-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.295 2 501.290548 1000.56654 87033.25 0.39189 0.00019645 -0.22568 -0.00011313 0.16621 8.3321E-05 501.290075565455 506.294794603988 50.762 0.42422 50.762 50.585 51.009 0 97 38 4 0 0 0 0.001038 1 28041 77.192 15.513 1 0.82713 0.83988 0 29110000 15222000 13888000 17730 1239 6709 6871 27762 27762 IQSIYLER 8 0 1 Unmodified _IQSIYLER_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.2879 2 511.287474 1020.5604 85731.55 0.34147 0.00017459 -0.16359 -8.3641E-05 0.17788 9.0949E-05 511.287636984361 516.291385371492 58.734 0.9394 58.734 58.278 59.218 0 349 76 7 0 0 0 2.4274E-05 1 33188 139.97 87.568 1 0.85143 0.97642 0 135440000 73252000 62189000 17731 876 6710 6872 27763 27763 IQSIYLER 8 0 1 Unmodified _IQSIYLER_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.2876 2 511.287474 1020.5604 85260 0.45388 0.00023206 -0.03111 -1.5906E-05 0.42277 0.00021616 511.28761608323 516.291446338331 57.735 0.86526 57.735 57.277 58.142 3.8147E-06 286 71 5 0 0 0 0.010755 1 33416 71.501 50.981 1 0.88277 1.0053 0 131110000 75239000 55872000 17732 876 6710 6872 27764 27764 IQSIYLER 8 0 1 Unmodified _IQSIYLER_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.2876 2 511.287474 1020.5604 84329.95 0.39234 0.0002006 -0.1469 -7.5108E-05 0.24544 0.00012549 511.287429169636 516.291421782494 68.085 0.74394 68.085 67.657 68.401 0 265 49 8 0 0 0 0.00099125 2 35435 119.27 92.672 1 1.3368 1.1038 0 19009000 7719800 11289000 17733 876 6710 6872 27765;27766 27765 IQSLLDIQEK 10 1 0 Unmodified _IQSLLDIQEK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.8448 2 593.837528 1185.6605 NaN NaN NaN -0.25224 -0.00014979 NaN NaN NaN NaN 93.362 0.49888 93.362 93.129 93.628 0 0 0 0 0.0032911 1 52152 77.14 27.696 1 NaN NaN 0 1497700 0 1497700 17734 1954 6711 6873 27767 27767 IQSQFTDAQK 10 1 0 Unmodified _IQSQFTDAQK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.2957 2 583.296027 1164.5775 79173.57 0.64553 0.00037653 0.25565 0.00014912 0.90118 0.00052565 583.295798547579 587.303777051347 26.649 0.35347 26.649 26.468 26.822 -1.9073E-06 68 17 7 0 0 0 8.0851E-05 1 12019 97.965 72.753 1 0.53838 0.58399 0 22383000 14221000 8161900 17735 1486 6712 6874 27768 27768 IQTLPNQNQSQTQPLLK 17 1 0 Unmodified _IQTLPNQNQSQTQPLLK_ 0 0 0 F5H3E1;F5H1H2;F5H2E6;A0A0C4DGG8;Q8IX12 F5H3E1 F5H3E1 CCAR1 Cell division cycle and apoptosis regulator protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.042 2 976.033996 1950.05344 62428.34 0.1646 0.00016065 0.028349 2.767E-05 0.19295 0.00018832 976.535677080471 980.040989693412 71.501 0.30531 71.501 71.357 71.662 0 81 25 5 0 0 0 0.001924 2 41668 37.426 32.347 1 1.4771 1.4556 0 8558100 2916700 5641500 17736 514 6713 6875 27769;27770 27769 IQTLPNQNQSQTQPLLK 17 1 0 Unmodified _IQTLPNQNQSQTQPLLK_ 0 0 0 F5H3E1;F5H1H2;F5H2E6;A0A0C4DGG8;Q8IX12 F5H3E1 F5H3E1 CCAR1 Cell division cycle and apoptosis regulator protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 980.5432 2 976.033996 1950.05344 63542.11 0.24276 0.00023694 -0.04262 -4.1599E-05 0.20014 0.00019534 976.535297462196 980.04100702222 70.401 0.34947 70.401 70.189 70.539 0 73 28 5 0 0 0 0.00094691 1 41933 44.299 44.299 1 1.4335 1.4471 0 8146500 2969500 5177000 17737 514 6713 6875 27771 27771 IQTLTSSVR 9 0 1 Unmodified _IQTLTSSVR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;E7EWU0 B2R6E5 B2R6E5 POR NADPH--cytochrome P450 reductase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.7955 2 502.790381 1003.56621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.775 1 38.775 38.275 39.275 0 0 0 0 0.00080297 1 19978 99.442 47.654 1 17738 719 6714 6876 27772 27772 IQTQPGYANTLR 12 0 1 Unmodified _IQTQPGYANTLR_ 0 0 0 F8VVM2;Q8NCF7;Q53HC3;B2RE88;A0A024RBE8;A0A024RBH9;Q00325 F8VVM2 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.3674 2 681.362233 1360.70991 73324.22 0.74589 0.00050822 0.71183 0.00048501 1.4577 0.00099323 681.362758190587 686.366839034566 46.223 0.48415 46.223 46.055 46.54 0 174 40 6 0 0 0 2.5884E-08 2 25050 119.53 100.21 1 1.2455 1.2678 0 29936000 9763200 20173000 17739 335 6715 6877 27773;27774 27774 IQTQPGYANTLR 12 0 1 Unmodified _IQTQPGYANTLR_ 0 0 0 F8VVM2;Q8NCF7;Q53HC3;B2RE88;A0A024RBE8;A0A024RBH9;Q00325 F8VVM2 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.3668 2 681.362233 1360.70991 74317.28 0.46143 0.0003144 0.33939 0.00023125 0.80082 0.00054565 681.361968654442 686.366487349698 54.169 0.82955 54.169 53.84 54.669 0 253 60 6 0 0 0 0.0051179 2 26332 51.762 44.425 1 2.0277 1.7335 0 4509300 1293800 3215500 17740 335 6715 6877 27775;27776 27775 IQVLQQQADDAEER 14 0 1 Unmodified _IQVLQQQADDAEER_ 0 0 0 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;Q8NAG3;B4DWT5;Q5VU61;A0A087WWU8;D6R904;D6RFM2 Q5HYB6 Q5HYB6 DKFZp686J1372;TPM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.4072 2 821.90519 1641.79583 65621.22 0.92866 0.00076327 1.2847 0.0010559 2.2134 0.0018192 821.904949695622 826.909734406905 49.377 0.73243 49.377 48.969 49.701 0 161 49 6 0 0 0 9.2129E-15 1 27068 134.98 129.48 1 2.3615 2.6272 0 77026000 22598000 54428000 17741 562 6716 6878 27777 27777 IQVLQQQADDAEER 14 0 1 Unmodified _IQVLQQQADDAEER_ 0 0 0 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;Q8NAG3;B4DWT5;Q5VU61;A0A087WWU8;D6R904;D6RFM2 Q5HYB6 Q5HYB6 DKFZp686J1372;TPM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.409 2 821.90519 1641.79583 66138.29 1.011 0.00083092 0.0098886 8.1275E-06 1.0209 0.00083904 821.905157494073 826.90957664105 48.228 0.78864 48.228 47.889 48.678 0 165 55 5 0 0 0 2.8256E-14 3 27049 128.85 123.35 1 2.5122 2.7447 0 30230000 11966000 18264000 17742 562 6716 6878 27778;27779;27780 27780 IQVLQQQADDAEER 14 0 1 Unmodified _IQVLQQQADDAEER_ 0 0 0 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;Q8NAG3;B4DWT5;Q5VU61;A0A087WWU8;D6R904;D6RFM2 Q5HYB6 Q5HYB6 DKFZp686J1372;TPM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 826.9101 2 821.90519 1641.79583 66718.89 0.72604 0.00059673 -0.045717 -3.7575E-05 0.68032 0.00055916 822.40517613229 826.909586693747 57.908 0.59641 57.908 57.56 58.157 3.8147E-06 186 43 7 0 0 0 8.9628E-05 2 28698 87.001 87.001 1 2.1227 1.7611 0 5217400 1653400 3564100 17743 562 6716 6878 27781;27782 27781 IQVLQQQADDAEERAER 17 0 2 Unmodified _IQVLQQQADDAEERAER_ 0 0 1 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;Q8NAG3;B4DWT5;Q5VU61;A0A087WWU8;D6R904;D6RFM2 Q5HYB6 Q5HYB6 DKFZp686J1372;TPM3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.6714 3 666.999492 1997.97665 NaN NaN NaN 0.32326 0.00021562 NaN NaN NaN NaN 59.236 0.7743 59.236 58.882 59.656 0 0 0 0 0.054404 1 29578 30.536 21.006 1 NaN NaN 0 1203200 0 1203200 17744 562 6717 6879 27783 27783 IQVQLCFK 8 1 0 Unmodified _IQVQLCFK_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0;B3KPY2;B3KP60;I3L1A7;I3L287 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.2858 2 518.28642 1034.55829 86108.41 0.55332 0.00028678 -0.42851 -0.00022209 0.12481 6.4687E-05 518.286480700985 522.292691424964 84.929 0.42337 84.929 84.749 85.173 0 80 27 4 0 0 0 0.030566 1 50869 58.167 58.167 1 1.0989 1.1415 0 14849000 8141200 6708000 17745 1781 6718 6880 27784 27784 IQVQLCFK 8 1 0 Unmodified _IQVQLCFK_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0;B3KPY2;B3KP60;I3L1A7;I3L287 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.2867 2 518.28642 1034.55829 86326.49 0.5133 0.00026604 -0.12263 -6.3556E-05 0.39067 0.00020248 518.286463180784 522.293335722023 97.361 0.49655 97.361 97.1 97.596 0 98 24 6 0 0 0 0.0069463 2 54824 93.262 93.262 1 1.3461 1.0454 0 3439800 1381700 2058100 17746 1781 6718 6880 27785;27786 27786 IQVQLCFK 8 1 0 Unmodified _IQVQLCFK_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0;B3KPY2;B3KP60;I3L1A7;I3L287 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.2936 2 518.28642 1034.55829 85274.01 0.12771 6.6188E-05 -0.13859 -7.1829E-05 -0.010883 -5.6406E-06 518.28644353039 522.293207897089 97.169 0.49261 97.168 96.929 97.421 -7.6294E-06 79 23 5 0 0 0 0.024045 1 53778 56.122 56.122 1 1.3544 1.0603 0 3743100 1537700 2205500 17747 1781 6718 6880 27787 27787 IQVTPPGFQLVFLPFADDK 19 1 0 Unmodified _IQVTPPGFQLVFLPFADDK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1068.0277 2 1066.57497 2131.13538 NaN NaN NaN 0.20213 0.00021558 NaN NaN NaN NaN 133.61 0.28065 133.61 133.5 133.78 0 0 0 0 2.7317E-09 1 87642 80.96 71.909 1 NaN NaN 0 175030000 175030000 0 17748 82 6719 6881 27788 27788 IQVTPPGFQLVFLPFADDK 19 1 0 Unmodified _IQVTPPGFQLVFLPFADDK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1066.1254 2 1066.57497 2131.13538 NaN NaN NaN -0.40337 -0.00043023 NaN NaN NaN NaN 133.6 0.21695 133.6 133.48 133.7 0 0 0 0 3.3042E-41 1 89798 143.67 128.17 1 NaN NaN 0 313610000 313610000 0 17749 82 6719 6881 27789 27789 IQVTPPGFQLVFLPFADDKR 20 1 1 Unmodified _IQVTPPGFQLVFLPFADDKR_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.4197 3 763.419439 2287.23649 73312.96 0.061988 4.7323E-05 -0.41187 -0.00031443 -0.34988 -0.0002671 763.419102986383 769.760420280565 133.32 0.25153 133.32 133.19 133.44 0 17 6 5 0 0 0 4.8485E-08 1 89504 85.737 85.737 1 0.37072 0.42408 0 22052000 16263000 5789500 17750 82 6720 6882 27790 27790 IQVWLYEQVNMR 12 0 1 Oxidation (M) _IQVWLYEQVNM(ox)R_ IQVWLYEQVNM(1)R IQVWLYEQVNM(70.1)R 0 1 0 P62304 P62304 P62304 SNRPE Small nuclear ribonucleoprotein E ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.9135 2 797.90595 1593.79735 NaN NaN NaN -0.013941 -1.1124E-05 NaN NaN NaN NaN 98.142 0.57971 98.142 97.954 98.534 0 0 0 0 0.0006651 1 59923 70.1 54.21 1 NaN NaN 0 6664100 0 6664100 17751 1642 6721 6883 27791 27791 1421 IQVWLYEQVNMR 12 0 1 Oxidation (M) _IQVWLYEQVNM(ox)R_ IQVWLYEQVNM(1)R IQVWLYEQVNM(75.39)R 0 1 0 P62304 P62304 P62304 SNRPE Small nuclear ribonucleoprotein E MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.9111 2 797.90595 1593.79735 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.327 1 97.327 96.827 97.827 0 0 0 0 0.00038095 1 60804 75.387 49.766 1 17752 1642 6721 6883 27792 27792 1421 IRDSEYEIQR 10 0 2 Unmodified _IRDSEYEIQR_ 0 0 1 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.8898 3 436.889603 1307.64698 93372.36 0.092723 4.051E-05 0.3362 0.00014688 0.42893 0.00018739 436.890185638711 443.561996603507 26.803 0.23665 26.803 26.69 26.926 -1.9073E-06 62 16 5 0 0 0 0.0015684 1 12148 55.401 42.445 1 0.66573 0.72514 0 13955000 7292400 6662900 17753 1681 6722 6884 27793 27793 IRDSEYEIQR 10 0 2 Unmodified _IRDSEYEIQR_ 0 0 1 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.8893 3 436.889603 1307.64698 96064.23 0.33436 0.00014608 -0.19998 -8.7369E-05 0.13438 5.8709E-05 436.889427505689 443.562129082735 26.168 0.26976 26.168 26.02 26.29 0 39 12 5 0 0 0 0.0015684 1 11681 54.259 44.255 1 0.55939 0.57748 0 12463000 7186300 5277100 17754 1681 6722 6884 27794 27794 IRDSEYEIQR 10 0 2 Unmodified _IRDSEYEIQR_ 0 0 1 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8347 2 654.830766 1307.64698 NaN NaN NaN 0.093826 6.144E-05 NaN NaN NaN NaN 26.185 0.31743 26.185 26.02 26.338 1.9073E-06 0 0 0 0.012663 1 11617 88.495 51.02 1 NaN NaN 0 8897900 8897900 0 17755 1681 6722 6884 27795 27795 IRDSEYEIQR 10 0 2 Unmodified _IRDSEYEIQR_ 0 0 1 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.5622 3 436.889603 1307.64698 92101.91 -0.15825 -6.9136E-05 0.5517 0.00024103 0.39346 0.0001719 436.889868538225 443.562042655167 30.762 0.36507 30.762 30.606 30.971 0 79 18 7 0 0 0 0.053375 1 12344 21.656 20.843 1 1.4645 1.3236 0 2959300 1289100 1670200 17756 1681 6722 6884 27796 27796 IREEFPDR 8 0 2 Unmodified _IREEFPDR_ 0 0 1 M0R042;M0QYM7;P04350;B4DE77;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386;K7ES63 M0R042;P04350;Q9BUF5 P04350 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 361.1894 3 354.517329 1060.53016 100896.5 0.31657 0.00011223 -0.2599 -9.2138E-05 0.056668 2.009E-05 354.517208309586 361.189449013741 27.086 0.37672 27.086 26.862 27.239 0 58 17 6 0 0 0 0.024542 1 12464 38.303 30.736 1 1.3089 1.3669 0 13435000 5608500 7826400 17757 1441;2004;1353 6723 6885 27797 27797 IREEYPDR 8 0 2 Unmodified _IREEYPDR_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00 Q5JP53;Q8IZ29;Q13885;Q3ZCM7 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 359.8489 3 359.848967 1076.52507 97724.5 0.026701 9.6083E-06 0.11357 4.0869E-05 0.14027 5.0477E-05 359.848934915296 366.52118001354 19.477 0.80099 19.477 19.2 20.001 0 266 46 8 0 0 0 0.0079509 2 5994 60.892 51.678 1 1.4171 1.5467 0 171360000 69801000 101560000 17758 1452;1660;1723;1778 6724 6886 27798;27799 27799 IREEYPDR 8 0 2 Unmodified _IREEYPDR_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00 Q5JP53;Q8IZ29;Q13885;Q3ZCM7 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.2698 2 539.269813 1076.52507 80300.93 0.52342 0.00028227 1.0813 0.00058313 1.6048 0.00086539 539.270116026654 549.278715674349 19.492 0.87717 19.492 19.2 20.078 0 276 48 8 0 0 0 0.0037794 2 5984 128.69 102.08 1 1.4373 1.57 0 225350000 90654000 134690000 17759 1452;1660;1723;1778 6724 6886 27800;27801 27800 IREEYPDR 8 0 2 Unmodified _IREEYPDR_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00 Q5JP53;Q8IZ29;Q13885;Q3ZCM7 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.2787 2 539.269813 1076.52507 80317.55 0.063685 3.4343E-05 0.36985 0.00019945 0.43354 0.00023379 539.269874443415 549.278347541801 19.18 0.64977 19.18 19.089 19.739 0 119 27 10 0 0 0 0.0051058 1 5645 125.16 98.023 1 1.5268 1.8743 0 734190000 287710000 446480000 17760 1452;1660;1723;1778 6724 6886 27802 27802 IREEYPDR 8 0 2 Unmodified _IREEYPDR_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00 Q5JP53;Q8IZ29;Q13885;Q3ZCM7 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 359.8492 3 359.848967 1076.52507 98986.35 -0.26559 -9.5573E-05 0.087855 3.1615E-05 -0.17774 -6.3959E-05 359.848951618934 366.521203209427 19.179 0.74401 19.179 19.07 19.814 0 134 31 9 0 0 0 1.0431E-21 2 5647 168.26 146.73 1 1.5023 1.839 0 656840000 249340000 407510000 17761 1452;1660;1723;1778 6724 6886 27803;27804 27804 IREEYPDR 8 0 2 Unmodified _IREEYPDR_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00 Q5JP53;Q8IZ29;Q13885;Q3ZCM7 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.2682 2 539.269813 1076.52507 80963.33 0.059391 3.2028E-05 -0.92305 -0.00049777 -0.86366 -0.00046575 539.268899947939 549.277836694592 20.636 0.60289 20.636 20.457 21.059 -1.9073E-06 174 30 9 0 0 0 0.062162 1 5452 69.716 55.558 1 1.1404 1.0632 0 33351000 15832000 17519000 17762 1452;1660;1723;1778 6724 6886 27805 27805 IREEYPDR 8 0 2 Unmodified _IREEYPDR_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A6NNZ2;A1L196;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00 Q5JP53;Q8IZ29;Q13885;Q3ZCM7 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 366.5213 3 359.848967 1076.52507 99170.02 -0.44462 -0.00016 -0.027986 -1.0071E-05 -0.4726 -0.00017007 359.848870986888 366.521173845912 20.635 0.43951 20.635 20.457 20.896 0 138 22 9 0 0 0 0.059476 1 5469 24.104 24.104 1 1.0753 0.99619 0 22072000 10647000 11425000 17763 1452;1660;1723;1778 6724 6886 27806 27806 IRELESQISELQEDLESER 19 0 2 Unmodified _IRELESQISELQEDLESER_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.0562 3 768.383559 2302.12885 68520.9 0.89859 0.00069046 -0.129 -9.9124E-05 0.76958 0.00059134 768.383313798569 775.055718302614 107.31 1.1544 107.31 106.82 107.98 0 257 87 5 0 0 0 1.0714E-08 1 66630 95.5 95.5 1 1.8022 1.962 0 73194000 26393000 46801000 17764 81 6725 6887 27807 27807 IRELESQISELQEDLESER 19 0 2 Unmodified _IRELESQISELQEDLESER_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.3853 3 768.383559 2302.12885 68272.94 0.85096 0.00065386 -0.033726 -2.5914E-05 0.81723 0.00062795 768.717615239941 775.055742024704 106.19 1.1859 106.19 105.74 106.93 -7.6294E-06 496 91 8 0 0 0 3.8467E-12 5 67282 100.67 92.582 1 1.6104 1.8632 0 72838000 28034000 44804000 17765 81 6725 6887 27808;27809;27810;27811;27812 27808 IRELESQISELQEDLESER 19 0 2 Unmodified _IRELESQISELQEDLESER_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.3904 3 768.383559 2302.12885 68039.77 0.90515 0.0006955 0.26338 0.00020238 1.1685 0.00089788 768.717794450736 775.390207948912 117.66 1.2118 117.66 117.37 118.59 -7.6294E-06 190 52 7 0 0 0 0.0012286 1 69180 34.615 34.615 1 2.2976 1.8996 0 22732000 7280500 15452000 17766 81 6725 6887 27813 27813 IRELESQISELQEDLESER 19 0 2 Unmodified _IRELESQISELQEDLESER_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.3905 3 768.383559 2302.12885 NaN NaN NaN 0.29533 0.00022692 NaN NaN NaN NaN 117.43 0.7738 117.43 117.24 118.02 -7.6294E-06 0 0 0 3.5569E-17 1 68230 107.18 107.18 1 NaN NaN 0 34925000 0 34925000 17767 81 6725 6887 27814 27814 IRELTAVVQK 10 1 1 Unmodified _IRELTAVVQK_ 0 0 1 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.868 2 578.856055 1155.69756 79152.34 0.59134 0.0003423 -0.15684 -9.0788E-05 0.4345 0.00025151 578.855871577495 587.867133932079 39.1 0.49034 39.1 38.908 39.398 0 171 42 6 0 0 0 0.038015 1 20568 57.96 26.025 1 1.1302 1.3178 0 45071000 19861000 25210000 17768 1511 6726 6888 27815 27815 IRGPEESQPPQLYAADEEEAPGTR 24 0 2 Unmodified _IRGPEESQPPQLYAADEEEAPGTR_ 0 0 1 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.4264 3 880.756056 2639.24634 67260.51 0.54747 0.00048219 -0.25655 -0.00022596 0.29092 0.00025623 881.090077718487 887.762173642298 65.27 0.42841 65.27 65.048 65.476 0 117 33 6 0 0 0 2.8482E-09 2 38466 56.947 56.947 1 0.72204 0.77645 0 16258000 7170700 9087500 17769 1814 6727 6889 27816;27817 27817 IRGPEESQPPQLYAADEEEAPGTR 24 0 2 Unmodified _IRGPEESQPPQLYAADEEEAPGTR_ 0 0 1 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 881.4277 3 880.756056 2639.24634 66131.16 0.45086 0.0003971 0.094715 8.3421E-05 0.54558 0.00048052 881.425713956457 887.762392877041 76.279 0.39124 76.279 76.09 76.481 0 138 29 7 0 0 0 0.0232 1 40674 19.737 19.737 1 0.76536 0.69279 0 3185900 1649600 1536300 17770 1814 6727 6889 27818 27818 IRGPEESQPPQLYAADEEEAPGTR 24 0 2 Unmodified _IRGPEESQPPQLYAADEEEAPGTR_ 0 0 1 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 881.09 3 880.756056 2639.24634 67048.16 0.13279 0.00011695 0.34345 0.0003025 0.47624 0.00041945 881.425486980308 887.762437262674 76.61 0.35735 76.61 76.391 76.748 0 107 26 6 0 0 0 0.0277 1 40022 18.776 16.463 1 0.73379 0.66181 0 2773800 1396700 1377100 17771 1814 6727 6889 27819 27819 IRGPEESQPPQLYAADEEEAPGTRDPTR 28 0 3 Unmodified _IRGPEESQPPQLYAADEEEAPGTRDPTR_ 0 0 2 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.3776 4 778.125985 3108.47483 68332 0.40348 0.00031396 0.10729 8.3484E-05 0.51076 0.00039744 778.376652923825 785.882992745215 71.091 0.499 71.091 70.888 71.387 0 178 31 9 0 0 0 0.00049177 3 37395 31.111 31.111 1 0.88558 1.0176 0 5323000 2665300 2657800 17772 1814 6728 6890 27820;27821;27822 27820 IRGPEESQPPQLYAADEEEAPGTRDPTR 28 0 3 Unmodified _IRGPEESQPPQLYAADEEEAPGTRDPTR_ 0 0 2 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 778.627 4 778.125985 3108.47483 69011.88 0.14394 0.000112 0.37889 0.00029483 0.52283 0.00040683 778.376977055577 785.883190392604 71.6 0.49364 71.6 71.406 71.9 0 167 32 8 0 0 0 0.010955 2 36932 22.239 22.239 1 0.9205 1.1062 0 4878700 2009200 2869500 17773 1814 6728 6890 27823;27824 27824 IRIDSLSAQLSQLQK 15 1 1 Unmodified _IRIDSLSAQLSQLQK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.6693 3 567.328221 1698.96283 80402.6 1.1052 0.00062702 -1.175 -0.00066659 -0.069749 -3.9571E-05 567.327754205626 573.334573784553 96.489 0.79367 96.489 96.003 96.797 0 320 68 8 0 0 0 0.0025083 1 58820 28.58 28.58 1 1.2063 1.4523 0 98963000 48286000 50677000 17774 1440 6729 6891 27825 27825 IRIDSLSAQLSQLQK 15 1 1 Unmodified _IRIDSLSAQLSQLQK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.3358 3 567.328221 1698.96283 NaN NaN NaN -0.27744 -0.0001574 NaN NaN NaN NaN 95.066 0.28406 95.066 94.824 95.108 0 0 0 0 0.011989 1 59074 49.223 44.907 1 NaN NaN 0 19174000 0 19174000 17775 1440 6729 6891 27826 27826 IRIDSLSAQLSQLQK 15 1 1 Unmodified _IRIDSLSAQLSQLQK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.6359 3 567.328221 1698.96283 80538.62 0.95595 0.00054234 -1.1852 -0.00067241 -0.22928 -0.00013008 567.327865204922 573.334424414565 95.204 0.89548 95.204 94.824 95.72 0 291 76 8 0 0 0 0.0026095 1 59266 53.169 53.169 1 1.2103 1.4242 0 79181000 36483000 42698000 17776 1440 6729 6891 27827 27827 IRIDSLSAQLSQLQK 15 1 1 Unmodified _IRIDSLSAQLSQLQK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.6629 3 567.328221 1698.96283 79678.59 0.68778 0.0003902 -0.19531 -0.00011081 0.49247 0.00027939 567.328109125487 573.335544745052 108.82 0.48907 108.82 108.64 109.13 -7.6294E-06 154 23 10 0 0 0 0.00010181 2 62512 64.476 64.476 1 1.4502 1.2611 0 19240000 6899300 12341000 17777 1440 6729 6891 27828;27829 27828 IRIDSLSAQLSQLQK 15 1 1 Unmodified _IRIDSLSAQLSQLQK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.3286 3 567.328221 1698.96283 79417.25 0.54749 0.00031061 -0.13774 -7.8142E-05 0.40976 0.00023247 567.662567397358 573.335615161906 108.65 0.54076 108.65 108.44 108.98 0 141 27 8 0 0 0 0.00019579 2 61496 57.788 57.788 1 1.4676 1.2444 0 17691000 7147200 10543000 17778 1440 6729 6891 27830;27831 27830 IRLESEEEGVPSTAIR 16 0 2 Unmodified _IRLESEEEGVPSTAIR_ 0 0 1 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.3168 3 595.98289 1784.92684 77485.19 0.75472 0.0004498 -0.25197 -0.00015017 0.50275 0.00029963 595.9826809994 602.654905208135 65.521 0.87888 65.521 65.105 65.983 7.6294E-06 461 79 8 0 0 0 7.1339E-05 2 37672 58.09 58.09 1 1.2247 1.3333 0 73716000 33498000 40217000 17779 25 6730 6892 27832;27833 27833 IRLESEEEGVPSTAIR 16 0 2 Unmodified _IRLESEEEGVPSTAIR_ 0 0 1 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.986 3 595.98289 1784.92684 78016.94 0.57334 0.0003417 0.23847 0.00014212 0.81181 0.00048382 595.982931372711 602.65517534775 63.663 0.86661 63.663 63.315 64.182 0 435 78 8 0 0 0 7.0897E-05 1 37346 65.105 65.105 1 1.2359 1.4317 0 76554000 33869000 42685000 17780 25 6730 6892 27834 27834 IRLESEEEGVPSTAIR 16 0 2 Unmodified _IRLESEEEGVPSTAIR_ 0 0 1 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.99 3 595.98289 1784.92684 76496.07 0.60912 0.00036302 0.21181 0.00012624 0.82093 0.00048926 595.982986726169 602.655145523883 74.945 0.75304 74.945 74.679 75.432 -7.6294E-06 293 55 8 0 0 0 0.001352 2 39921 28.869 28.869 1 1.2078 0.99923 0 22203000 10324000 11879000 17781 25 6730 6892 27835;27836 27836 IRPLTEAEK 9 1 1 Unmodified _IRPLTEAEK_ 0 0 1 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 358.8805 3 352.873113 1055.59751 101435.9 0.094925 3.3497E-05 -0.29646 -0.00010461 -0.20153 -7.1114E-05 352.872938547799 358.880500410224 24.101 0.34349 24.101 23.936 24.279 0 61 15 6 0 0 0 0.0032872 2 9857 62.463 56.36 1 1.0219 1.1153 0 16430000 8097000 8333100 17782 780 6731 6893 27837;27838 27837 IRPLTEAEK 9 1 1 Unmodified _IRPLTEAEK_ 0 0 1 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.8179 2 528.806031 1055.59751 82105.79 0.39074 0.00020663 -0.081954 -4.3338E-05 0.30879 0.00016329 528.806116129668 537.81705944696 24.133 0.3743 24.133 23.885 24.26 0 68 17 6 0 0 0 0.0016795 1 9868 101.65 101.65 1 0.97876 1.1705 0 54690000 27471000 27219000 17783 780 6731 6893 27839 27839 IRPLTEAEK 9 1 1 Unmodified _IRPLTEAEK_ 0 0 1 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 352.8729 3 352.873113 1055.59751 100017.2 0.13337 4.7064E-05 -0.4197 -0.0001481 -0.28633 -0.00010104 352.872978320416 358.880395268594 23.53 0.33742 23.53 23.363 23.701 0 61 13 7 0 0 0 0.0059635 2 9390 55.461 51.349 1 1.0368 1.1837 0 20881000 9696200 11185000 17784 780 6731 6893 27840;27841 27841 IRVDFSITK 9 1 1 Unmodified _IRVDFSITK_ 0 0 1 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4;H7BXF3 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 366.221 3 360.213358 1077.61824 101461.9 0.13668 4.9232E-05 0.044916 1.6179E-05 0.18159 6.5412E-05 360.213236697536 366.220828358437 70.905 0.70297 70.905 70.481 71.184 0 141 55 5 0 0 0 0.0198 1 41177 33.744 27.44 1 1.1243 1.2095 0 11551000 4081900 7469200 17785 889 6732 6894 27842 27842 IRVDFSITK 9 1 1 Unmodified _IRVDFSITK_ 0 0 1 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4;H7BXF3 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.8165 2 539.816399 1077.61824 81754.37 0.74128 0.00040016 0.056073 3.0269E-05 0.79736 0.00043043 539.816307493496 548.827732541895 68.445 0.54083 68.445 68.217 68.757 0 161 42 7 0 0 0 7.2855E-05 2 40675 123.86 123.86 1 1.166 1.3633 0 50509000 24615000 25894000 17786 889 6732 6894 27843;27844 27844 IRVDFSITK 9 1 1 Unmodified _IRVDFSITK_ 0 0 1 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4;H7BXF3 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 366.2207 3 360.213358 1077.61824 101074.8 0.45324 0.00016326 -0.64215 -0.00023131 -0.18891 -6.8048E-05 360.212935356884 366.220625431672 68.439 0.39121 68.439 68.29 68.681 0 115 31 7 0 0 0 0.0019878 2 40628 60.398 54.095 1 1.0951 1.2606 0 27303000 11129000 16174000 17787 889 6732 6894 27845;27846 27845 IRVDLASETSSR 12 0 2 Unmodified _IRVDLASETSSR_ 0 0 1 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 451.9128 3 445.240524 1332.69974 91590.15 -0.020916 -9.3127E-06 -0.05817 -2.59E-05 -0.079086 -3.5212E-05 445.240633443497 451.912616874761 49.984 0.54914 49.984 49.687 50.236 0 130 48 4 0 0 0 0.050627 1 24374 16.725 13.858 1 0.83186 0.75088 0 3296400 1800500 1495900 17788 1566 6733 6895 27847 27847 IRVDYSITK 9 1 1 Unmodified _IRVDYSITK_ 0 0 1 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.8143 2 547.813856 1093.61316 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.682 1 47.682 47.182 48.182 0 0 0 0 0.0056566 1 25895 92.051 29.469 1 17789 1716 6734 6896 27848 27848 IRVDYSITK 9 1 1 Unmodified _IRVDYSITK_ 0 0 1 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 371.5523 3 365.544996 1093.61316 100101.1 0.00079871 2.9196E-07 -0.13902 -5.0819E-05 -0.13822 -5.0527E-05 365.544900582561 371.552375979712 45.962 0.35835 45.962 45.789 46.147 0 110 30 6 0 0 0 0.004746 1 25293 59.426 39.664 1 1.3237 1.5233 0 26969000 11887000 15082000 17790 1716 6734 6896 27849 27849 IRVDYSITK 9 1 1 Unmodified _IRVDYSITK_ 0 0 1 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.8251 2 547.813856 1093.61316 NaN NaN NaN -0.016101 -8.8202E-06 NaN NaN NaN NaN 45.962 0.46521 45.962 45.752 46.218 3.8147E-06 0 0 0 0.0047084 1 25254 92.051 40.197 1 NaN NaN 0 29643000 0 29643000 17791 1716 6734 6896 27850 27850 IRVESLLVTAISK 13 1 1 Unmodified _IRVESLLVTAISK_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.955 2 714.942859 1427.87116 72617.44 1.0426 0.00074541 0.33846 0.00024198 1.3811 0.00098738 714.943022042007 723.954318533473 114.42 0.43404 114.42 114.23 114.66 -7.6294E-06 79 18 7 0 0 0 0.0029188 1 66841 61.48 41.177 1 1.182 0.99299 0 7052600 3085700 3966900 17792 1379 6735 6897 27851 27851 IRYESLTDPSK 11 1 1 Unmodified _IRYESLTDPSK_ 0 0 1 B4DMA2;A0A024RD80;P08238;Q6PK50;Q58FF7;O14942;Q58FF8;K9JA46;P07900;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1;Q58FF6 B4DMA2;Q58FF8;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AB2P;EL52;HSP90AA1;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.9052 3 436.897987 1307.67213 90266.85 0.010005 4.371E-06 0.14114 6.1665E-05 0.15115 6.6036E-05 436.897995442273 442.905485881721 39.514 0.73111 39.514 39.271 40.002 0 323 60 8 0 0 0 0.00068193 1 20436 53.6 53.6 1 2.6985 3.245 0 83033000 26058000 56975000 17793 379;1348;1800;1799 6736 6898 27852 27852 IRYESLTDPSK 11 1 1 Unmodified _IRYESLTDPSK_ 0 0 1 B4DMA2;A0A024RD80;P08238;Q6PK50;Q58FF7;O14942;Q58FF8;K9JA46;P07900;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1;Q58FF6 B4DMA2;Q58FF8;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AB2P;EL52;HSP90AA1;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8546 2 654.843342 1307.67213 NaN NaN NaN -0.068321 -4.4739E-05 NaN NaN NaN NaN 39.594 0.74205 39.594 39.271 40.013 0 0 0 0 6.2558E-15 1 20415 133.89 105.49 1 NaN NaN 0 86972000 0 86972000 17794 379;1348;1800;1799 6736 6898 27853 27853 IRYESLTDPSK 11 1 1 Unmodified _IRYESLTDPSK_ 0 0 1 B4DMA2;A0A024RD80;P08238;Q6PK50;Q58FF7;O14942;Q58FF8;K9JA46;P07900;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1;Q58FF6 B4DMA2;Q58FF8;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AB2P;EL52;HSP90AA1;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.855 2 654.843342 1307.67213 74107.73 0.38102 0.00024951 0.22671 0.00014846 0.60773 0.00039796 654.843492829558 663.854683455515 38.133 0.44481 38.133 37.871 38.316 0 157 34 8 0 0 0 1.1916E-05 1 19826 111.86 89.769 1 2.694 3.1872 0 185810000 52856000 132950000 17795 379;1348;1800;1799 6736 6898 27854 27854 IRYESLTDPSK 11 1 1 Unmodified _IRYESLTDPSK_ 0 0 1 B4DMA2;A0A024RD80;P08238;Q6PK50;Q58FF7;O14942;Q58FF8;K9JA46;P07900;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1;Q58FF6 B4DMA2;Q58FF8;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AB2P;EL52;HSP90AA1;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.9055 3 436.897987 1307.67213 89168.42 -0.091788 -4.0102E-05 0.048243 2.1077E-05 -0.043545 -1.9025E-05 436.897953695843 442.905444662389 38.129 0.72112 38.129 37.86 38.581 0 253 57 7 0 0 0 0.00028185 2 19856 60.161 60.161 1 2.5341 2.9913 0 129440000 37828000 91614000 17796 379;1348;1800;1799 6736 6898 27855;27856 27855 IRYESLTDPSK 11 1 1 Unmodified _IRYESLTDPSK_ 0 0 1 B4DMA2;A0A024RD80;P08238;Q6PK50;Q58FF7;O14942;Q58FF8;K9JA46;P07900;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1;Q58FF6 B4DMA2;Q58FF8;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AB2P;EL52;HSP90AA1;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 442.9055 3 436.897987 1307.67213 90621.63 -0.1304 -5.697E-05 0.21617 9.4446E-05 0.085777 3.7476E-05 436.898089898129 442.905551168714 45.298 0.54773 45.298 45.086 45.634 0 201 38 9 0 0 0 0.049646 1 21630 21.06 17.931 1 1.3659 1.1639 0 9490800 4206800 5284100 17797 379;1348;1800;1799 6736 6898 27857 27857 IRYESLTDPSK 11 1 1 Unmodified _IRYESLTDPSK_ 0 0 1 B4DMA2;A0A024RD80;P08238;Q6PK50;Q58FF7;O14942;Q58FF8;K9JA46;P07900;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1;Q58FF6 B4DMA2;Q58FF8;K9JA46;Q58FF6 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AB2P;EL52;HSP90AA1;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 436.8982 3 436.897987 1307.67213 91264.46 0.28711 0.00012544 -0.272 -0.00011883 0.015118 6.605E-06 436.897853585274 442.905320191529 45.307 0.7685 45.307 44.992 45.761 0 241 51 6 0 0 0 0.049897 1 21092 26.711 26.617 1 1.5103 1.2668 0 5159700 1772300 3387400 17798 379;1348;1800;1799 6736 6898 27858 27858 ISAILHPSTYLNK 13 1 0 Unmodified _ISAILHPSTYLNK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8481 2 728.911559 1455.80856 74748.55 0.64997 0.00047377 0.13511 9.8486E-05 0.78509 0.00057226 728.911609295474 733.420134026003 72.115 0.47017 72.115 71.86 72.33 0 115 35 4 0 0 0 0.00031691 2 42230 64.82 64.82 1 0.90132 0.88761 0 9131300 4889000 4242300 17799 486 6737 6899 27859;27860 27860 ISAILHPSTYLNK 13 1 0 Unmodified _ISAILHPSTYLNK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.9484 3 486.276798 1455.80856 85662.94 0.24686 0.00012004 -0.033392 -1.6238E-05 0.21346 0.0001038 486.276848743153 488.948141035478 70.171 0.89967 70.171 69.785 70.685 0 382 72 7 0 0 0 0.0012176 1 41737 43.761 43.761 1 0.91382 1.0411 0 149850000 74980000 74874000 17800 486 6737 6899 27861 27861 ISAILHPSTYLNK 13 1 0 Unmodified _ISAILHPSTYLNK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.9194 2 728.911559 1455.80856 74870.76 0.5043 0.00036759 0.22519 0.00016414 0.72949 0.00053173 728.911716602978 732.918556005716 70.171 0.53093 70.171 69.926 70.456 0 134 44 4 0 0 0 0.00012293 1 41869 77.662 77.662 1 0.88581 0.90804 0 17633000 8705600 8927200 17801 486 6737 6899 27862 27862 ISAILHPSTYLNK 13 1 0 Unmodified _ISAILHPSTYLNK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.948 3 486.276798 1455.80856 85711.02 0.19515 9.4896E-05 0.34956 0.00016998 0.5447 0.00026488 486.277394258659 488.94814434127 81.898 1.3475 81.898 81.54 82.888 0 352 82 9 0 0 0 0.019942 2 44429 20.648 20.648 1 1.206 0.97162 0 22187000 10285000 11902000 17802 486 6737 6899 27863;27864 27864 ISAILHPSTYLNK 13 1 0 Unmodified _ISAILHPSTYLNK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.9189 2 728.911559 1455.80856 72079.95 0.64288 0.0004686 -0.094951 -6.9211E-05 0.54793 0.00039939 728.911390445901 732.918580376739 81.903 0.62291 81.903 81.623 82.246 0 158 36 6 0 0 0 0.012576 1 44431 39.266 39.266 1 1.2282 0.97267 0 4933200 2137200 2795900 17803 486 6737 6899 27865 27865 ISAILHPSTYLNK 13 1 0 Unmodified _ISAILHPSTYLNK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.2779 3 486.276798 1455.80856 85972.84 0.26091 0.00012687 0.30601 0.00014881 0.56692 0.00027568 486.277197317472 488.948280331212 81.783 1.2157 81.783 81.382 82.598 0 331 67 9 0 0 0 0.021514 1 43506 24.935 16.336 1 1.2938 1.036 0 21625000 8852300 12773000 17804 486 6737 6899 27866 27866 ISAILHPSTYLNK 13 1 0 Unmodified _ISAILHPSTYLNK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.9193 2 728.911559 1455.80856 71931.41 0.59342 0.00043255 0.1557 0.0001135 0.74913 0.00054605 728.911725308134 732.918797070209 81.782 0.68811 81.782 81.556 82.244 0 152 38 6 0 0 0 0.041081 1 43569 31.185 31.185 1 1.391 1.1349 0 6371600 2919300 3452300 17805 486 6737 6899 27867 27867 ISANENSLAVR 11 0 1 Unmodified _ISANENSLAVR_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.3201 2 587.314751 1172.61495 NaN NaN NaN 0.15487 9.0959E-05 NaN NaN NaN NaN 42.493 0.55046 42.493 42.267 42.817 0 0 0 0 1.6117E-40 1 22489 178.32 125.92 1 NaN NaN 0 59093000 0 59093000 17806 1010 6738 6900 27868 27868 ISANENSLAVR 11 0 1 Unmodified _ISANENSLAVR_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.3192 2 587.314751 1172.61495 NaN NaN NaN -0.0092641 -5.4409E-06 NaN NaN NaN NaN 41.909 0.63326 41.909 41.581 42.214 0 0 0 0 1.3948E-23 1 22443 155.84 88.812 1 NaN NaN 0 51010000 0 51010000 17807 1010 6738 6900 27869 27869 ISANENSLAVR 11 0 1 Unmodified _ISANENSLAVR_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.3194 2 587.314751 1172.61495 78809.4 0.42262 0.00024821 0.016892 9.9212E-06 0.43951 0.00025813 587.314658566367 592.31884964933 49.624 0.86833 49.624 49.323 50.191 0 270 74 7 0 0 0 2.5494E-12 2 24171 139.38 101.82 1 5.1359 4.2142 0 12232000 1905600 10326000 17808 1010 6738 6900 27870;27871 27870 ISANENSLAVR 11 0 1 Unmodified _ISANENSLAVR_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.3194 2 587.314751 1172.61495 78933.34 0.24852 0.00014596 0.22733 0.00013351 0.47585 0.00027947 587.314823487514 592.318994417053 49.972 0.71726 49.972 49.639 50.357 0 253 58 7 0 0 0 1.6243E-10 1 23825 135.43 107.21 1 4.8579 3.9378 0 11909000 2025600 9883300 17809 1010 6738 6900 27872 27872 ISAPNEFDVMFK 12 1 0 Oxidation (M) _ISAPNEFDVM(ox)FK_ ISAPNEFDVM(1)FK ISAPNEFDVM(94.3)FK 0 1 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3395 2 707.339578 1412.6646 71266.88 0.96949 0.00068576 -0.9359 -0.000662 0.033587 2.3757E-05 707.339226785645 711.346250516525 92.159 1.0064 92.159 91.663 92.669 0 431 94 7 0 0 0 6.0805E-05 2 55741 94.297 94.297 1 2.0871 2.3541 0 131550000 44147000 87401000 17810 1914 6739 6901 27873;27874 27874 1748 ISAPNEFDVMFK 12 1 0 Oxidation (M) _ISAPNEFDVM(ox)FK_ ISAPNEFDVM(1)FK ISAPNEFDVM(111.06)FK 0 1 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.3396 2 707.339578 1412.6646 71298.93 0.68365 0.00048358 -0.2367 -0.00016743 0.44695 0.00031615 707.339471723946 711.346724359104 91.51 0.92793 91.51 90.947 91.875 0 435 81 8 0 0 0 1.7216E-06 2 56484 111.06 106.9 1 2.0637 2.3072 0 105800000 39711000 66088000 17811 1914 6739 6901 27875;27876 27876 1748 ISAPNEFDVMFK 12 1 0 Oxidation (M) _ISAPNEFDVM(ox)FK_ ISAPNEFDVM(1)FK ISAPNEFDVM(74.84)FK 0 1 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.337 2 707.339578 1412.6646 71334.23 0.75281 0.0005325 -0.51472 -0.00036408 0.2381 0.00016842 707.338932415135 711.34642590993 105.74 0.66806 105.74 105.38 106.04 0 226 40 8 0 0 0 8.7558E-05 2 60228 74.841 70.592 1 1.1884 0.92148 0 13831000 6063000 7768000 17812 1914 6739 6901 27877;27878 27878 1748 ISAPNEFDVMFK 12 1 0 Oxidation (M) _ISAPNEFDVM(ox)FK_ ISAPNEFDVM(1)FK ISAPNEFDVM(49.5)FK 0 1 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 711.3475 2 707.339578 1412.6646 72179.3 0.87007 0.00061544 0.31756 0.00022462 1.1876 0.00084006 707.841805467157 711.346911094037 118.77 0.43958 118.77 118.56 119 -7.6294E-06 64 22 4 0 0 0 0.0029313 1 70242 49.5 45.346 1 2.1803 1.7291 0 4410000 1526800 2883200 17813 1914 6739 6901 27879 27879 1748 ISAPNEFDVMFK 12 1 0 Oxidation (M) _ISAPNEFDVM(ox)FK_ ISAPNEFDVM(1)FK ISAPNEFDVM(94.3)FK 0 1 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.3478 2 707.339578 1412.6646 70324.58 0.6071 0.00042942 -0.85407 -0.00060412 -0.24698 -0.0001747 707.338187479984 711.346506853343 105.51 0.70385 105.51 105.15 105.85 0 273 50 8 0 0 0 6.0805E-05 3 59215 94.297 94.297 1 1.2743 1.0454 0 12402000 5930100 6472200 17814 1914 6739 6901 27880;27881;27882 27881 1748 ISAPNEFDVMFK 12 1 0 Unmodified _ISAPNEFDVMFK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 703.3495 2 699.34212 1396.66969 71184.63 0.77706 0.00054343 -0.065557 -4.5847E-05 0.71151 0.00049759 699.34208492056 703.349169236852 118.77 0.5947 118.77 118.51 119.11 0 113 29 5 0 0 0 0.00011875 1 70201 94.692 77.461 1 2.1573 1.7091 0 10356000 3322100 7033900 17815 1914 6739 6902 27883 27883 ISAPNEFDVMFK 12 1 0 Unmodified _ISAPNEFDVMFK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.35 2 699.34212 1396.66969 73457.6 0.76893 0.00053774 0.17542 0.00012268 0.94435 0.00066042 699.342004474247 703.34910722179 118.57 0.72637 118.57 118.31 119.03 0 94 34 4 0 0 0 1.4464E-05 1 69188 105.98 84.511 1 1.9696 1.6261 0 11358000 3683200 7675100 17816 1914 6739 6902 27884 27884 ISARDRGRLMYR 12 0 4 Oxidation (M) _ISARDRGRLM(ox)YR_ ISARDRGRLM(1)YR ISARDRGRLM(40.72)YR 0 1 3 A0A0S2Z586;A0A0S2Z527;Q53H87;Q59G10;O75891 A0A0S2Z586 A0A0S2Z586 ALDH1L1 Cytosolic 10-formyltetrahydrofolate dehydrogenase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.4052 2 755.406983 1508.79941 NaN NaN NaN -0.015442 -1.1665E-05 NaN NaN NaN NaN 116.73 0.59505 116.73 116.53 117.13 0 0 0 0 0.016083 1 76415 40.724 22.389 1 NaN NaN 0 7740600 7740600 0 17817 575 6740 6903 27885 27885 430 ISASLLDSR 9 0 1 Unmodified _ISASLLDSR_ 0 0 0 M0R1B0;Q53Y03;O43402 M0R1B0 M0R1B0 EMC8;COX4NB ER membrane protein complex subunit 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.2701 2 481.269281 960.52401 93836.19 0.046509 2.2384E-05 0.45356 0.00021828 0.50007 0.00024067 481.26961336743 486.273487441707 59.894 0.54794 59.894 59.587 60.135 3.8147E-06 128 46 4 0 0 0 6.9093E-06 2 34204 130.56 71.317 1 0.89018 0.92431 0 20780000 9865100 10915000 17818 1355 6741 6904 27886;27887 27887 ISASLLDSR 9 0 1 Unmodified _ISASLLDSR_ 0 0 0 M0R1B0;Q53Y03;O43402 M0R1B0 M0R1B0 EMC8;COX4NB ER membrane protein complex subunit 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.2696 2 481.269281 960.52401 91759.55 0.062841 3.0244E-05 0.15754 7.5821E-05 0.22038 0.00010606 481.269380408973 486.273417207372 69.165 0.46924 69.165 68.927 69.396 0 82 30 4 0 0 0 0.012314 1 36186 57.59 28.213 1 0.77111 0.67978 0 1625300 989710 635610 17819 1355 6741 6904 27888 27888 ISAVSVAER 9 0 1 Unmodified _ISAVSVAER_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.2643 2 466.263999 930.513445 89372.04 0.32138 0.00014985 -0.047816 -2.2295E-05 0.27357 0.00012755 466.263852307791 471.268029361616 37.87 0.67187 37.87 37.527 38.199 0 307 56 8 0 0 0 0.0011206 2 19226 89.698 32.521 1 1.2385 1.4376 0 175780000 78216000 97561000 17820 1691 6742 6905 27889;27890 27889 ISAVSVAER 9 0 1 Unmodified _ISAVSVAER_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2635 2 466.263999 930.513445 88221.38 0.44182 0.000206 0.27377 0.00012765 0.71559 0.00033365 466.263996931678 471.26813257601 36.998 0.72938 36.998 36.643 37.372 0 267 56 7 0 0 0 0.00013706 2 19054 108.74 29.274 1 1.2494 1.4392 0 220440000 104060000 116390000 17821 1691 6742 6905 27891;27892 27892 ISAVSVAER 9 0 1 Unmodified _ISAVSVAER_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.2682 2 466.263999 930.513445 88104.55 0.23221 0.00010827 0.05547 2.5864E-05 0.28768 0.00013413 466.26394058798 471.268091620712 43.107 0.59175 43.107 42.812 43.403 -3.8147E-06 173 37 7 0 0 0 0.0096208 2 20164 60.019 8.1582 1 1.5355 1.3219 0 7339200 2833300 4505800 17822 1691 6742 6905 27893;27894 27893 ISAVSVAER 9 0 1 Unmodified _ISAVSVAER_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.2685 2 466.263999 930.513445 90246.3 0.014797 6.8992E-06 0.14725 6.8656E-05 0.16204 7.5555E-05 466.264034943809 471.268101874443 43.163 0.63721 43.163 42.804 43.441 0 164 40 7 0 0 0 0.0043049 1 19678 69.598 12.421 1 1.5448 1.2849 0 7381300 2880800 4500500 17823 1691 6742 6905 27895 27895 ISAVSVAQR 9 0 1 Unmodified _ISAVSVAQR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.7757 2 465.771991 929.529429 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.508 1 33.508 33.008 34.008 0 0 0 0 0.015404 1 16696 58.426 6.5619 1 17824 122 6743 6906 27896 27896 ISAVSVAQR 9 0 1 Unmodified _ISAVSVAQR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.7759 2 465.771991 929.529429 91733.39 0.20892 9.7308E-05 -0.069621 -3.2428E-05 0.1393 6.488E-05 465.771854081661 470.776087535055 33.143 0.4308 33.143 32.902 33.333 0 80 39 4 0 0 0 0.0067422 1 16510 63.419 8.0489 1 1.2902 1.2816 0 8722600 4116700 4606000 17825 122 6743 6906 27897 27897 ISDIQSQLEK 10 1 0 Unmodified _ISDIQSQLEK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.8117 2 580.81151 1159.60847 79514.64 0.61112 0.00035494 -0.26945 -0.0001565 0.34166 0.00019844 580.811213404502 584.818444712895 48.218 0.86575 48.218 47.85 48.716 0 406 69 8 0 0 0 4.2954E-16 2 26100 153.05 105.86 1 0.93077 1.1034 0 480400000 232510000 247890000 17826 303 6744 6907 27898;27899 27899 ISDIQSQLEK 10 1 0 Unmodified _ISDIQSQLEK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8188 2 580.81151 1159.60847 78605.38 0.5008 0.00029087 -0.51829 -0.00030103 -0.017485 -1.0156E-05 580.811038547621 584.818289174968 47.101 0.89064 47.101 46.768 47.659 3.8147E-06 376 69 9 0 0 0 2.7106E-30 2 25974 179.8 123.55 1 0.97469 1.1485 0 579240000 294690000 284550000 17827 303 6744 6907 27900;27901 27900 ISDIQSQLEK 10 1 0 Unmodified _ISDIQSQLEK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.812 2 580.81151 1159.60847 78739.72 0.55235 0.00032081 -0.046409 -2.6955E-05 0.50594 0.00029386 580.811461702369 584.818543995093 55.619 1.5351 55.619 55.245 56.78 3.8147E-06 488 97 9 0 0 0 3.0918E-08 3 27832 119.68 87.266 1 1.4974 1.2838 0 77840000 30131000 47710000 17828 303 6744 6907 27902;27903;27904 27903 ISDIQSQLEK 10 1 0 Unmodified _ISDIQSQLEK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.8188 2 580.81151 1159.60847 78590.72 0.45011 0.00026143 -0.03514 -2.041E-05 0.41497 0.00024102 580.811464032575 584.818557809529 56.129 1.6482 56.129 55.753 57.401 0 501 113 11 0 0 0 2.7323E-09 3 27513 126.31 91.045 1 1.4762 1.2515 0 64712000 27618000 37094000 17829 303 6744 6907 27905;27906;27907 27905 ISDSEGFK 8 1 0 Unmodified _ISDSEGFK_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.7206 2 441.713808 881.413062 92582.41 -0.24403 -0.00010779 -0.031373 -1.3858E-05 -0.27541 -0.00012165 441.713654539202 445.72088131008 24.903 0.47871 24.903 24.708 25.187 0 102 24 7 0 0 0 0.024949 1 10601 55.531 29.637 1 1.9415 1.9015 0 21994000 8303000 13691000 17830 1510 6745 6908 27908 27908 ISDVIEDSVVEDYNSVDK 18 1 0 Unmodified _ISDVIEDSVVEDYNSVDK_ 0 0 0 Q7Z3K3;A6PW30;E9PJY9;E9PIR8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1017.4861 2 1013.47858 2024.94261 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.454 1 98.454 97.954 98.954 0 0 0 0 0.0087618 1 60188 44.616 31.212 1 17831 1874 6746 6909 27909 27909 ISDVIEDSVVEDYNSVDK 18 1 0 Unmodified _ISDVIEDSVVEDYNSVDK_ 0 0 0 Q7Z3K3;A6PW30;E9PJY9;E9PIR8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1017.4862 2 1013.47858 2024.94261 59714.44 0.57732 0.0005851 -0.10909 -0.00011056 0.46823 0.00047454 1014.48005307658 1017.48535876696 111.46 0.46616 111.46 111.21 111.68 0 96 22 8 0 0 0 4.455E-05 2 64615 59.709 59.709 1 1.4877 1.1798 0 4395300 1546700 2848600 17832 1874 6746 6909 27910;27911 27910 ISEECIAQWK 10 1 0 Unmodified _ISEECIAQWK_ 0 0 0 A0A0S2Z4R1;P54577 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.314 2 632.305538 1262.59652 NaN NaN NaN 0.11768 7.4411E-05 NaN NaN NaN NaN 67.976 0.43266 67.976 67.747 68.179 0 0 0 0 2.3553E-05 2 39315 103.56 82.662 1 NaN NaN 0 5477000 0 5477000 17833 567 6747 6910 27912;27913 27912 ISEEYFAQTDEEK 13 1 0 Unmodified _ISEEYFAQTDEEK_ 0 0 0 Q3ZCW6;B3KMJ9;B3KN77;O95263;Q3ZCR2 Q3ZCW6 Q3ZCW6 PDE8B High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.8633 2 794.8543 1587.69405 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.701 1 55.701 55.201 56.201 0 0 0 0 0.004941 1 31957 58.676 45.909 1 17834 905 6748 6911 27914 27914 ISEGTGFR 8 0 1 Unmodified _ISEGTGFR_ 0 0 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.7214 2 433.721967 865.429381 NaN NaN NaN -0.40548 -0.00017586 NaN NaN NaN NaN 27.199 0.32421 27.199 27.014 27.339 0 0 0 0 0.019368 1 12407 65.777 22.777 1 NaN NaN 0 5856800 5856800 0 17835 2126 6749 6912 27915 27915 ISELEFHTDK 10 1 0 Unmodified _ISELEFHTDK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.8106 2 609.803685 1217.59282 79396.38 0.90345 0.00055093 0.029585 1.8041E-05 0.93303 0.00056897 609.803823819499 613.810470933913 44.504 0.68608 44.504 44.269 44.955 0 172 61 6 0 0 0 1.137E-05 3 23817 104.2 77.07 1 0.90181 0.95274 0 31034000 15682000 15352000 17836 1942 6750 6913 27916;27917;27918 27917 ISELEFHTDK 10 1 0 Unmodified _ISELEFHTDK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 409.5435 3 406.871549 1217.59282 94063.84 0.39477 0.00016062 0.30109 0.0001225 0.69586 0.00028313 406.871568396864 409.543024997555 44.508 1.0263 44.508 44.24 45.266 -3.8147E-06 419 91 7 0 0 0 0.00035411 2 23860 65.5 50.357 1 0.77226 0.87355 0 86160000 46737000 39423000 17837 1942 6750 6913 27919;27920 27920 ISELEFHTDK 10 1 0 Unmodified _ISELEFHTDK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.3124 2 609.803685 1217.59282 78817.42 0.52875 0.00032244 0.22599 0.00013781 0.75474 0.00046024 609.803870646628 613.810824032196 43.576 0.33545 43.576 43.399 43.735 0 126 25 6 0 0 0 9.7687E-12 2 23612 138.98 111.85 1 0.84273 0.94196 0 99663000 57976000 41687000 17838 1942 6750 6913 27921;27922 27922 ISELEFHTDK 10 1 0 Unmodified _ISELEFHTDK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 406.8716 3 406.871549 1217.59282 92985.21 0.14445 5.8772E-05 0.018091 7.3606E-06 0.16254 6.6132E-05 406.871516333677 409.542927763354 43.524 0.65624 43.524 43.319 43.976 -3.8147E-06 246 50 9 0 0 0 0.0022519 2 23592 50.284 40.851 1 0.8009 0.93626 0 287800000 149970000 137830000 17839 1942 6750 6913 27923;27924 27923 ISELEFHTDK 10 1 0 Unmodified _ISELEFHTDK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 409.5428 3 406.871549 1217.59282 93097.54 -0.28107 -0.00011436 0.29433 0.00011975 0.013258 5.3944E-06 406.871602372559 409.543011648951 51.392 0.74402 51.392 51.051 51.795 0 287 53 8 0 0 0 0.024597 1 25293 26.012 16.579 1 1.5436 1.2168 0 17690000 7025200 10665000 17840 1942 6750 6913 27925 27925 ISELEFHTDK 10 1 0 Unmodified _ISELEFHTDK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.8107 2 609.803685 1217.59282 NaN NaN NaN 0.3453 0.00021057 NaN NaN NaN NaN 51.66 0.67441 51.66 51.352 52.027 0 0 0 0 0.0087219 1 24774 64.654 64.654 1 NaN NaN 0 3799000 0 3799000 17841 1942 6750 6913 27926 27926 ISELEIINSSFENILQEK 18 1 0 Unmodified _ISELEIINSSFENILQEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1057.5583 2 1053.55188 2105.08922 59885.85 0.57342 0.00060413 0.48787 0.00051399 1.0613 0.0011181 1054.05357924764 1057.55883887817 132.97 0.36826 132.97 132.73 133.1 0 76 16 7 0 0 0 4.0286E-22 2 86913 127.02 127.02 1 1.4541 1.4654 0 7148500 2960200 4188300 17842 1581 6751 6914 27927;27928 27928 ISELEIINSSFENILQEK 18 1 0 Unmodified _ISELEIINSSFENILQEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1057.559 2 1053.55188 2105.08922 58280.08 0.88982 0.00093747 0.76428 0.00080521 1.6541 0.0017427 1054.05306603298 1058.06140342976 132.51 0.49448 132.51 132.27 132.77 0 93 28 6 0 0 0 2.4413E-22 4 88726 131.32 131.32 1 1.1962 1.2196 0 12162000 4678500 7483300 17843 1581 6751 6914 27929;27930;27931;27932 27930 ISELGAGNGGVVFK 14 1 0 Unmodified _ISELGAGNGGVVFK_ 0 0 0 B4DFY5;A4QPA9;Q02750 B4DFY5 B4DFY5 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.3743 2 674.366984 1346.71942 73758.02 0.41461 0.0002796 0.062961 4.2459E-05 0.47757 0.00032206 674.367304904262 678.374017370739 76.921 0.65805 76.921 76.496 77.154 0 267 49 8 0 0 0 0.0002368 1 46315 64.103 64.103 1 1.0337 1.1346 0 41398000 23287000 18111000 17844 674 6752 6915 27933 27933 ISELSLCDLAGSER 14 0 1 Unmodified _ISELSLCDLAGSER_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.3804 2 775.379962 1548.74537 69072.95 0.83076 0.00064415 0.23439 0.00018174 1.0651 0.00082589 775.37991071029 780.384500614705 95.496 0.72131 95.496 95.054 95.775 0 310 55 7 0 0 0 1.8967E-06 2 57970 107.09 74.23 1 0.66528 0.70659 0 42430000 24315000 18115000 17845 1421 6753 6916 27934;27935 27935 ISELSLCDLAGSER 14 0 1 Unmodified _ISELSLCDLAGSER_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.3806 2 775.379962 1548.74537 68338.26 0.72308 0.00056066 0.037296 2.8918E-05 0.76037 0.00058958 775.379982611845 780.384117286513 94.755 0.7392 94.755 94.315 95.054 0 359 61 9 0 0 0 8.3805E-31 3 58788 162.68 107.62 1 0.67866 0.77772 0 51299000 28265000 23035000 17846 1421 6753 6916 27936;27937;27938 27938 ISELSLCDLAGSER 14 0 1 Unmodified _ISELSLCDLAGSER_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.8867 2 775.379962 1548.74537 67864.54 0.88148 0.00068348 -0.1701 -0.00013189 0.71138 0.00055159 775.379745501172 780.384099809196 108.7 0.866 108.7 108.44 109.3 7.6294E-06 288 43 11 0 0 0 2.6923E-05 2 62372 96.604 71.168 1 1.263 1.0789 0 38376000 16486000 21890000 17847 1421 6753 6916 27939;27940 27939 ISELSLCDLAGSER 14 0 1 Unmodified _ISELSLCDLAGSER_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.3852 2 775.379962 1548.74537 68185.82 0.71358 0.00055329 -0.39712 -0.00030792 0.31646 0.00024537 775.379696341845 780.384048060454 108.66 0.80099 108.66 108.34 109.15 0 267 39 11 0 0 0 2.217E-09 2 61435 117.23 74.897 1 1.3462 1.1743 0 40409000 18303000 22106000 17848 1421 6753 6916 27941;27942 27942 ISEQFTAMFR 10 0 1 Oxidation (M) _ISEQFTAM(ox)FR_ ISEQFTAM(1)FR ISEQFTAM(128.38)FR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.3003 2 623.300255 1244.58596 74708.04 0.53889 0.00033589 0.039751 2.4777E-05 0.57864 0.00036067 623.29998203488 628.304419292254 72.877 1.1288 72.877 72.402 73.53 0 493 92 9 0 0 0 1.089E-09 2 42579 128.38 118.12 1 2.5441 3.0083 0 269450000 75600000 193850000 17849 1452;1660;1723;1441;502 6754 6917 27943;27944 27944 349 ISEQFTAMFR 10 0 1 Oxidation (M) _ISEQFTAM(ox)FR_ ISEQFTAM(1)FR ISEQFTAM(172.23)FR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.3 2 623.300255 1244.58596 74407.61 0.51828 0.00032304 -0.054379 -3.3894E-05 0.4639 0.00028915 623.300117385981 628.304298875627 71.641 1.0423 71.641 71.288 72.33 0 443 87 8 0 0 0 5.3523E-23 2 42951 172.23 161.52 1 2.6709 3.104 0 371780000 113860000 257930000 17850 1452;1660;1723;1441;502 6754 6917 27945;27946 27946 349 ISEQFTAMFR 10 0 1 Oxidation (M) _ISEQFTAM(ox)FR_ ISEQFTAM(1)FR ISEQFTAM(90.64)FR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.3052 2 623.300255 1244.58596 77157.42 0.46419 0.00028933 0.34703 0.0002163 0.81122 0.00050563 623.300217617173 628.30451855443 83.494 0.71747 83.494 83.209 83.926 0 213 50 7 0 0 0 0.00014767 2 45478 90.64 90.64 1 0.63814 0.53922 0 9533300 6409000 3124300 17851 1452;1660;1723;1441;502 6754 6917 27947;27948 27948 349 ISEQFTAMFR 10 0 1 Oxidation (M) _ISEQFTAM(ox)FR_ ISEQFTAM(1)FR ISEQFTAM(47.19)FR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.3041 2 623.300255 1244.58596 NaN NaN NaN -0.56208 -0.00035034 NaN NaN NaN NaN 83.642 0.68256 83.642 83.344 84.026 0 0 0 0 0.015081 1 44801 47.187 31.927 1 NaN NaN 0 3767200 0 3767200 17852 1452;1660;1723;1441;502 6754 6917 27949 27949 349 ISEQFTAMFR 10 0 1 Unmodified _ISEQFTAMFR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.3032 2 615.302798 1228.59104 80041.02 0.57919 0.00035638 1.2061 0.0007421 1.7853 0.0010985 615.3022655753 620.306715613471 94.712 0.45759 94.712 94.504 94.961 -7.6294E-06 106 41 6 0 0 0 0.00074153 1 57597 81.972 51.805 1 0.84297 0.87431 0 13672000 6787300 6884600 17853 1452;1660;1723;1441;502 6754 6918 27950 27950 ISEQFTAMFR 10 0 1 Unmodified _ISEQFTAMFR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.3065 2 615.302798 1228.59104 73399.2 0.37144 0.00022855 1.0506 0.00064647 1.4221 0.00087501 615.302802306333 620.306777523902 93.794 0.64016 93.794 93.445 94.085 0 150 56 4 0 0 0 0.040006 1 58245 38.776 28.066 1 1.081 1.1596 0 25331000 12065000 13266000 17854 1452;1660;1723;1441;502 6754 6918 27951 27951 ISEQFTAMFR 10 0 1 Unmodified _ISEQFTAMFR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.3073 2 615.302798 1228.59104 77268.62 0.58173 0.00035794 0.1523 9.3709E-05 0.73402 0.00045165 615.302716859127 620.306871213199 107.99 0.65341 107.99 107.7 108.36 0 149 34 6 0 0 0 0.0036548 2 61971 63.534 41.297 1 1.3355 1.1251 0 4646300 2086200 2560100 17855 1452;1660;1723;1441;502 6754 6918 27952;27953 27953 ISEQFTAMFR 10 0 1 Unmodified _ISEQFTAMFR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.3068 2 615.302798 1228.59104 77871.77 0.51511 0.00031695 -0.15009 -9.2349E-05 0.36503 0.0002246 615.302675808283 620.306736873717 107.8 0.58352 107.8 107.59 108.18 -7.6294E-06 131 29 7 0 0 0 0.00061581 2 60958 83.998 57.893 1 1.4434 1.2553 0 4282000 1645200 2636800 17856 1452;1660;1723;1441;502 6754 6918 27954;27955 27955 ISEQIVIGTPGTVLDWCSK 19 1 0 Unmodified _ISEQIVIGTPGTVLDWCSK_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24;H3BN59;H3BMQ5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1056.0494 2 1052.04317 2102.07179 NaN NaN NaN -1.0092 -0.0010618 NaN NaN NaN NaN 118.5 0.24729 118.5 118.39 118.63 -7.6294E-06 0 0 0 0.00012033 1 76071 64.104 47.161 1 NaN NaN 0 3461800 0 3461800 17857 593 6755 6919 27956 27956 ISEQIVIGTPGTVLDWCSK 19 1 0 Unmodified _ISEQIVIGTPGTVLDWCSK_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24;H3BN59;H3BMQ5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1056.5526 2 1052.04317 2102.07179 NaN NaN NaN -0.21056 -0.00022152 NaN NaN NaN NaN 118.05 0.30435 118.05 117.89 118.2 0 0 0 0 0.0033171 2 77533 45.115 35.328 1 NaN NaN 0 5687100 0 5687100 17858 593 6755 6919 27957;27958 27958 ISEVVELLK 9 1 0 Unmodified _ISEVVELLK_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.3128 2 515.313158 1028.61176 86728.02 0.57066 0.00029407 -0.3471 -0.00017887 0.22356 0.0001152 515.312826126393 519.320517588755 93.648 0.57169 93.648 93.365 93.937 -7.6294E-06 116 49 4 0 0 0 0.021043 1 56894 49.715 28.415 1 0.75135 0.76278 0 13576000 9188600 4387400 17859 1601 6756 6920 27959 27959 ISEVVELLK 9 1 0 Unmodified _ISEVVELLK_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.3133 2 515.313158 1028.61176 87317.98 0.44628 0.00022997 0.051739 2.6662E-05 0.49801 0.00025663 515.312994468664 519.32043738127 92.673 0.59898 92.673 92.426 93.025 0 114 48 5 0 0 0 0.0016421 1 57446 82.75 41.972 1 0.8551 0.86989 0 16874000 8644400 8229300 17860 1601 6756 6920 27960 27960 ISEYSEAAITIR 12 0 1 Unmodified _ISEYSEAAITIR_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.3254 2 676.856449 1351.69835 76492.15 0.40286 0.00027268 0.54203 0.00036688 0.9449 0.00063956 676.857150778059 681.86102668602 73.51 0.62746 73.51 73.223 73.85 0 100 52 4 0 0 0 0.0095282 1 44259 66.056 66.056 1 1.1306 1.1272 0 11653000 5693300 5960100 17861 511 6757 6921 27961 27961 ISFDLAEYTADVDGVGTLR 19 0 1 Unmodified _ISFDLAEYTADVDGVGTLR_ 0 0 0 B2R9X3;O60547 B2R9X3 B2R9X3 GMDS GDP-mannose 4,6 dehydratase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1026.5101 2 1021.50748 2041.0004 NaN NaN NaN -1.0502 -0.0010728 NaN NaN NaN NaN 123.85 0.26344 123.85 123.75 124.02 -7.6294E-06 0 0 0 0.0022755 2 82343 48.704 40.6 1 NaN NaN 0 2532700 0 2532700 17862 869 6758 6922 27962;27963 27962 ISFGTDYGCCIVELGK 16 1 0 Unmodified _ISFGTDYGCCIVELGK_ 0 0 0 B4DXG8;A5PLM5;Q06265;D6RIY6;D6R905;D6RA17;D6RAP4 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 909.9265 2 909.92368 1817.83281 63689.65 0.67234 0.00061177 0.11757 0.00010698 0.78991 0.00071875 910.425687020608 913.930719522479 120.15 0.44536 120.15 119.89 120.34 -7.6294E-06 93 19 7 0 0 0 0.019468 1 70427 28.976 28.976 1 1.0251 0.83543 0 6627400 3288600 3338700 17863 675 6759 6923 27964 27964 ISFLENNLEQLTK 13 1 0 Unmodified _ISFLENNLEQLTK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;B4DS27;Q57Z91;A0A0G2JMZ6;A1L179;J3KNA1;B7Z2M7;B2RCP3;O60282;Q12840;Q59GB8;B0I1S7 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5C;KIF5A Kinesin-like protein;Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.926 2 774.917038 1547.81952 76458.34 1.2817 0.00099317 0.30204 0.00023406 1.5837 0.0012272 774.91657717769 778.924406339134 110.59 0.33073 110.59 110.49 110.82 0 59 23 5 0 0 0 1.1168E-15 2 69503 137.89 137.89 1 2.3642 2.3913 0 10139000 3755800 6383100 17864 1186 6760 6924 27965;27966 27966 ISFLENNLEQLTK 13 1 0 Unmodified _ISFLENNLEQLTK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;B4DS27;Q57Z91;A0A0G2JMZ6;A1L179;J3KNA1;B7Z2M7;B2RCP3;O60282;Q12840;Q59GB8;B0I1S7 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5C;KIF5A Kinesin-like protein;Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.9163 2 774.917038 1547.81952 NaN NaN NaN -1.5136 -0.0011729 NaN NaN NaN NaN 109.96 0.2679 109.96 109.88 110.15 0 0 0 0 1.1492E-20 2 70731 134.75 108.08 1 NaN NaN 0 3818200 3818200 0 17865 1186 6760 6924 27967;27968 27968 ISFLENNLEQLTK 13 1 0 Unmodified _ISFLENNLEQLTK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;B4DS27;Q57Z91;A0A0G2JMZ6;A1L179;J3KNA1;B7Z2M7;B2RCP3;O60282;Q12840;Q59GB8;B0I1S7 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5C;KIF5A Kinesin-like protein;Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.4255 2 774.917038 1547.81952 NaN NaN NaN 0.40221 0.00031168 NaN NaN NaN NaN 109.96 0.31696 109.96 109.86 110.18 7.6294E-06 0 0 0 1.5302E-20 1 70714 131.83 109.83 1 NaN NaN 0 8185000 0 8185000 17866 1186 6760 6924 27969 27969 ISFLENNLEQLTK 13 1 0 Unmodified _ISFLENNLEQLTK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;B4DS27;Q57Z91;A0A0G2JMZ6;A1L179;J3KNA1;B7Z2M7;B2RCP3;O60282;Q12840;Q59GB8;B0I1S7 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5C;KIF5A Kinesin-like protein;Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.9249 2 774.917038 1547.81952 72335.52 0.9451 0.00073237 0.22006 0.00017053 1.1652 0.0009029 775.419470591213 779.425924113669 122.03 0.34682 122.03 121.86 122.21 -7.6294E-06 40 16 4 0 0 0 0.0032736 1 72762 50.354 50.354 1 0.89031 0.70466 0 5000800 2979900 2020900 17867 1186 6760 6924 27970 27970 ISFLENNLEQLTK 13 1 0 Unmodified _ISFLENNLEQLTK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;B4DS27;Q57Z91;A0A0G2JMZ6;A1L179;J3KNA1;B7Z2M7;B2RCP3;O60282;Q12840;Q59GB8;B0I1S7 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5C;KIF5A Kinesin-like protein;Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 779.4269 2 774.917038 1547.81952 71473.93 0.95583 0.00074069 0.10134 7.8529E-05 1.0572 0.00081922 775.419247543867 778.924106406285 121.83 0.26872 121.83 121.7 121.97 7.6294E-06 38 10 7 0 0 0 0.020752 1 71689 35.594 35.594 1 1.1165 0.88805 0 4049200 1803700 2245500 17868 1186 6760 6924 27971 27971 ISFVEEDVHPK 11 1 0 Unmodified _ISFVEEDVHPK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.8908 3 433.890832 1298.65067 90944.25 0.061604 2.6729E-05 0.62904 0.00027293 0.69064 0.00029966 433.890845729816 436.562493523212 53.338 0.50261 53.338 53.122 53.624 0 140 38 7 0 0 0 0.0078955 2 29777 35.645 26.691 1 1.4558 1.6062 0 56331000 24539000 31792000 17869 1945 6761 6925 27972;27973 27973 ISFVEEDVHPK 11 1 0 Unmodified _ISFVEEDVHPK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.334 2 650.33261 1298.65067 78165.66 0.52293 0.00034008 0.20245 0.00013166 0.72538 0.00047174 650.332675433554 654.339684886509 51.767 0.55836 51.767 51.555 52.114 0 103 45 5 0 0 0 0.0076189 1 29435 52.278 52.278 1 1.1426 1.2125 0 20462000 10621000 9840900 17870 1945 6761 6925 27974 27974 ISFVEEDVHPK 11 1 0 Unmodified _ISFVEEDVHPK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.3406 2 650.33261 1298.65067 74619.61 0.44915 0.00029209 0.63303 0.00041168 1.0822 0.00070377 650.332560316841 654.34008425887 62.2 0.59178 62.2 61.932 62.524 0 186 44 6 0 0 0 0.0037462 1 31186 64.297 64.297 1 3.1023 2.4207 0 3642600 909250 2733400 17871 1945 6761 6925 27975 27975 ISGALFTNDK 10 1 0 Unmodified _ISGALFTNDK_ 0 0 0 A6NHR9;J3KRK8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.2901 2 533.282389 1064.55022 81634.23 0.38517 0.0002054 0.4108 0.00021907 0.79597 0.00042448 533.282655674665 537.289618791844 56.601 0.73098 56.601 56.164 56.895 0 171 66 4 0 0 0 0.00074284 1 31849 81.95 36.27 1 0.70655 0.72961 0 17251000 9761000 7490000 17872 684 6762 6926 27976 27976 ISGALFTNDK 10 1 0 Unmodified _ISGALFTNDK_ 0 0 0 A6NHR9;J3KRK8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.29 2 533.282389 1064.55022 83182.47 0.39073 0.00020837 -1.8441 -0.00098344 -1.4534 -0.00077507 533.282168847317 537.289687544359 55.486 0.74181 55.486 55.181 55.922 0 205 54 6 0 0 0 0.0083382 1 31763 56.209 19.653 1 0.67879 0.68704 0 26619000 13420000 13198000 17873 684 6762 6926 27977 27977 ISGDLSSEEER 11 0 1 Unmodified _ISGDLSSEEER_ 0 0 0 Q9NSI6;Q5R2U6;H0Y463;Q5R2U9;H0Y500;Q5R2U8;H0Y5I9;Q5R2U5;H0Y4A7;Q5R2U4;H0Y4R9 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.2868 2 611.283314 1220.55207 78113 0.42742 0.00026127 -0.3313 -0.00020252 0.096116 5.8754E-05 611.283180311969 616.287068516281 27.632 0.32495 27.632 27.454 27.779 -1.9073E-06 92 23 6 0 0 0 0.00026225 1 12731 90.108 80.52 1 0.72162 0.75006 0 13540000 7426900 6113100 17874 2068 6763 6927 27978 27978 ISGDLSSEEER 11 0 1 Unmodified _ISGDLSSEEER_ 0 0 0 Q9NSI6;Q5R2U6;H0Y463;Q5R2U9;H0Y500;Q5R2U8;H0Y5I9;Q5R2U5;H0Y4A7;Q5R2U4;H0Y4R9 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.2818 2 611.283314 1220.55207 78268.28 0.34429 0.00021046 -0.36147 -0.00022096 -0.017179 -1.0501E-05 611.282900176821 616.287165482706 27.179 0.30542 27.179 27.015 27.32 -1.9073E-06 66 15 5 0 0 0 0.00042899 2 12479 79.201 74.236 1 0.79521 0.79531 0 16982000 8897100 8085000 17875 2068 6763 6927 27979;27980 27980 ISGETIFVTAPHEATAGIIGVNR 23 0 1 Unmodified _ISGETIFVTAPHEATAGIIGVNR_ 0 0 0 A0A087WVQ6;Q00610 A0A087WVQ6 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.7598 3 785.08853 2352.24376 69158.61 0.8807 0.00069143 -0.36596 -0.00028731 0.51474 0.00040411 785.423139687818 788.758357910687 116.36 0.27015 116.36 116.21 116.48 0 43 11 5 0 0 0 0.038759 2 67469 12.307 12.307 1 1.3381 1.1459 0 2850900 1025000 1825900 17876 419 6764 6928 27981;27982 27982 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8185 2 590.814053 1179.61355 77144.51 0.73625 0.00043498 0.080758 4.7713E-05 0.817 0.0004827 590.814092759989 595.818216904998 47.284 0.72115 47.284 46.894 47.616 0 333 65 7 0 0 0 1.0257E-11 1 25489 138.4 138.4 1 0.6238 0.7004 0 93167000 52985000 40182000 17877 828 6765 6929 27983 27983 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8144 2 590.814053 1179.61355 78971.56 0.71725 0.00042376 0.68915 0.00040716 1.4064 0.00083092 590.813926227274 595.818046694409 70.564 1.6274 70.564 70.378 72.006 0 502 137 7 0 0 0 2.8407E-12 2 41471 147.2 130.1 1 0.69513 0.77469 0 83228000 45833000 37395000 17878 828 6765 6929 27984;27985 27985 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8154 2 590.814053 1179.61355 79618.02 0.62092 0.00036685 0.8175 0.00048299 1.4384 0.00084984 590.814424459797 595.818988778585 76.601 1.7848 76.601 75.964 77.749 0 319 148 3 0 0 0 0.0005206 1 44939 85.533 85.533 1 0.94134 0.95758 0 27445000 13992000 13452000 17879 828 6765 6929 27986 27986 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.819 2 590.814053 1179.61355 81069.23 0.68477 0.00040457 -0.37081 -0.00021908 0.31396 0.00018549 590.813725224558 595.81800284666 141.82 0.68829 141.82 141.43 142.12 1.5259E-05 155 75 4 0 0 0 0.019072 1 90347 47.198 47.198 1 0.54439 0.59596 0 982870 645900 336980 17880 828 6765 6929 27987 27987 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8141 2 590.814053 1179.61355 78943.73 0.98838 0.00058395 -0.49426 -0.00029201 0.49413 0.00029194 590.813672122879 595.817895852558 144.36 1.4215 144.36 143.71 145.14 -1.5259E-05 372 154 4 0 0 0 0.00022929 1 91122 93.111 93.111 1 0.6945 0.74779 0 3151600 1641700 1509900 17881 828 6765 6929 27988 27988 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8183 2 590.814053 1179.61355 79217.7 1.0691 0.00063161 -0.25085 -0.0001482 0.81821 0.00048341 590.813852920701 595.817976881405 145.27 0.69582 145.27 145.12 145.81 0 124 47 7 0 0 0 4.2111E-16 2 91312 153.24 130.17 1 0.68835 0.77099 0 89891000 53463000 36427000 17882 828 6765 6929 27989;27990 27989 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8153 2 590.814053 1179.61355 NaN NaN NaN 0.934 0.00055182 NaN NaN NaN NaN 46.881 0.13389 46.881 46.817 46.951 0 0 0 0 0.034477 1 25351 50.834 21.685 1 NaN NaN 0 7065100 7065100 0 17883 828 6765 6929 27991 27991 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8179 2 590.814053 1179.61355 NaN NaN NaN -1.1174 -0.00066016 NaN NaN NaN NaN 48.711 0.16939 48.711 48.598 48.768 0 0 0 0 0.0025045 1 26563 80.219 43.027 1 NaN NaN 0 2702200 0 2702200 17884 828 6765 6929 27992 27992 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8144 2 590.814053 1179.61355 NaN NaN NaN 0.18601 0.00010989 NaN NaN NaN NaN 66.309 4.4707 66.309 65.933 70.403 0 0 0 0 1.3178E-79 6 39615 218.73 159.92 1 NaN NaN 0 7735400000 7735400000 0 17885 828 6765 6929 27993;27994;27995;27996;27997;27998 27996 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8146 2 590.814053 1179.61355 NaN NaN NaN 0.17651 0.00010428 NaN NaN NaN NaN 71.837 0.95764 71.837 71.261 72.219 0 0 0 0 0.0025671 1 42079 79.974 36.166 1 NaN NaN 0 32491000 32491000 0 17886 828 6765 6929 27999 27999 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8188 2 590.814053 1179.61355 NaN NaN NaN 0.048215 2.8486E-05 NaN NaN NaN NaN 72.637 2.692 72.637 71.966 74.658 0 0 0 0 2.5011E-08 3 43465 116.3 84.37 1 NaN NaN 0 178150000 0 178150000 17887 828 6765 6929 28000;28001;28002 28002 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8145 2 590.814053 1179.61355 NaN NaN NaN -0.26478 -0.00015644 NaN NaN NaN NaN 74.435 1.0722 74.435 74.008 75.081 7.6294E-06 0 0 0 0.0021725 1 43584 81.95 46.655 1 NaN NaN 0 16622000 16622000 0 17888 828 6765 6929 28003 28003 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8145 2 590.814053 1179.61355 NaN NaN NaN -0.042935 -2.5367E-05 NaN NaN NaN NaN 75.332 0.91856 75.332 75.081 75.999 0 0 0 0 6.926E-08 1 44243 112.75 71.719 1 NaN NaN 0 14728000 14728000 0 17889 828 6765 6929 28004 28004 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8132 2 590.814053 1179.61355 NaN NaN NaN -0.76651 -0.00045286 NaN NaN NaN NaN 77.337 0.32748 77.337 77.208 77.536 0 0 0 0 0.018622 1 45700 54.982 34.357 1 NaN NaN 0 9430700 9430700 0 17890 828 6765 6929 28005 28005 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8152 2 590.814053 1179.61355 NaN NaN NaN -0.53984 -0.00031895 NaN NaN NaN NaN 115.83 0.12932 115.83 115.79 115.92 7.6294E-06 0 0 0 0.044232 1 73862 48.283 24.128 1 NaN NaN 0 865020 865020 0 17891 828 6765 6929 28006 28006 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8181 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.335 1 69.335 68.835 69.835 0 0 0 0 0.00045959 1 40262 72.643 37.348 1 17892 828 6765 6929 28007 28007 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8181 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.107 1 70.107 69.607 70.607 -7.6294E-06 0 0 0 4.4007E-06 1 40768 103.7 55.417 1 17893 828 6765 6929 28008 28008 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8193 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.813 1 71.813 71.313 72.313 0 0 0 0 4.3846E-05 1 41944 88.495 49.191 1 17894 828 6765 6929 28009 28009 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8175 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.25 1 81.25 80.75 81.75 -7.6294E-06 0 0 0 0.00051004 1 48409 71.349 34.158 1 17895 828 6765 6929 28010 28010 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8148 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.839 1 82.839 82.339 83.339 -7.6294E-06 0 0 0 4.3846E-05 1 49533 88.495 47.466 1 17896 828 6765 6929 28011 28011 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.816 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.742 1 83.742 83.242 84.242 -7.6294E-06 0 0 0 0.0022916 1 50144 67.704 41.599 1 17897 828 6765 6929 28012 28012 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8145 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.974 1 87.974 87.474 88.474 0 0 0 0 0.014006 1 53047 56.013 29.411 1 17898 828 6765 6929 28013 28013 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8148 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.586 1 88.586 88.086 89.086 7.6294E-06 0 0 0 4.946E-05 1 53408 87.258 54.903 1 17899 828 6765 6929 28014 28014 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8135 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.376 1 89.376 88.876 89.876 0 0 0 0 0.0005471 1 53959 70.399 41.25 1 17900 828 6765 6929 28015 28015 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8139 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.99 1 92.99 92.49 93.49 0 0 0 0 0.00047395 1 56367 72.275 35.433 1 17901 828 6765 6929 28016 28016 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8178 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.25 1 103.25 102.75 103.75 0 0 0 0 0.051383 1 63668 44.203 14.73 1 17902 828 6765 6929 28017 28017 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8141 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.81 1 107.81 107.31 108.31 0 0 0 0 0.0041025 1 67218 65.305 35.051 1 17903 828 6765 6929 28018 28018 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8143 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.66 1 121.66 121.16 122.16 0 0 0 0 0.032215 1 78648 49.715 25.76 1 17904 828 6765 6929 28019 28019 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8149 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.25 1 126.25 125.75 126.75 7.6294E-06 0 0 0 0.031275 1 82145 50.04 21.866 1 17905 828 6765 6929 28020 28020 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8145 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 143.77 1 143.77 143.27 144.27 0 0 0 0 0.016751 1 90927 55.064 33.764 1 17906 828 6765 6929 28021 28021 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.818 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 143.9 1 143.9 143.4 144.4 0 0 0 0 0.00099359 1 90958 69.423 29.422 1 17907 828 6765 6929 28022 28022 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.814 2 590.814053 1179.61355 78665.48 0.64209 0.00037935 -0.028292 -1.6716E-05 0.61379 0.00036264 590.813916146791 595.818259175451 45.665 0.52335 45.665 45.574 46.098 0 132 45 5 0 0 0 1.017E-05 2 25308 105.1 105.1 1 0.63144 0.69125 0 32837000 19441000 13396000 17908 828 6765 6929 28023;28024 28024 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8143 2 590.814053 1179.61355 79390.47 0.63868 0.00037734 0.86388 0.00051039 1.5026 0.00088774 590.814108871602 595.819158184663 74.585 1.5558 74.585 73.621 75.177 0 271 132 5 0 0 0 0.00018094 2 44572 94.692 94.692 1 0.74916 0.81994 0 33271000 19599000 13671000 17909 828 6765 6929 28025;28026 28025 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8142 2 590.814053 1179.61355 79680.27 0.83953 0.000496 0.87212 0.00051526 1.7116 0.0010113 590.81397765188 595.818646975812 81.373 0.93307 81.373 80.771 81.704 0 252 78 6 0 0 0 0.0067494 1 49611 58.37 45.843 1 0.79072 0.84287 0 24525000 12214000 12311000 17910 828 6765 6929 28027 28027 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8146 2 590.814053 1179.61355 81478.4 0.94006 0.0005554 0.08679 5.1277E-05 1.0269 0.00060668 590.813941459495 595.818423012812 83.52 0.40627 83.52 83.286 83.692 0 78 30 5 0 0 0 0.00037039 1 51219 88.495 73.826 1 0.76729 0.7577 0 12742000 6272900 6469000 17911 828 6765 6929 28028 28028 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.3354 2 590.814053 1179.61355 82744.13 0.65011 0.00038409 2.0839 0.0012312 2.734 0.0016153 590.814251951266 596.320890839443 94.918 0.42055 94.918 94.688 95.108 7.6294E-06 95 36 5 0 0 0 0.041248 1 59066 38.276 38.276 1 0.49956 0.49698 0 7212600 5207700 2005000 17912 828 6765 6929 28029 28029 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8138 2 590.814053 1179.61355 80005.23 -0.10458 -6.1787E-05 0.56137 0.00033167 0.45679 0.00026988 590.814353326874 595.818567202014 143.89 1.3867 143.89 143.36 144.74 -1.5259E-05 448 154 4 0 0 0 0.00095338 3 92562 78.556 78.556 1 0.65315 0.69018 0 3918200 2384500 1533700 17913 828 6765 6929 28030;28031;28032 28032 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8138 2 590.814053 1179.61355 80005.26 -0.4835 -0.00028566 0.80359 0.00047477 0.32008 0.00018911 590.814538872214 595.81876164963 144.63 0.54997 144.63 144.51 145.06 0 145 61 4 0 0 0 0.022046 1 92702 46.001 46.001 1 0.66675 0.73895 0 1494100 929060 565000 17914 828 6765 6929 28033 28033 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8146 2 590.814053 1179.61355 NaN NaN NaN -0.64873 -0.00038328 NaN NaN NaN NaN 63.887 0.38723 63.887 63.664 64.052 0 0 0 0 0.01025 1 37599 63.076 39.647 1 NaN NaN 0 4047700 4047700 0 17915 828 6765 6929 28034 28034 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8141 2 590.814053 1179.61355 NaN NaN NaN 0.083742 4.9476E-05 NaN NaN NaN NaN 65.056 2.8225 65.056 64.701 67.523 0 0 0 0 1.0478E-39 5 38197 175.51 133.41 1 NaN NaN 0 7819000000 7819000000 0 17916 828 6765 6929 28035;28036;28037;28038;28039 28035 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8191 2 590.814053 1179.61355 NaN NaN NaN -0.36117 -0.00021338 NaN NaN NaN NaN 67.56 1.3783 67.56 67.523 68.902 0 0 0 0 8.448E-05 1 40459 98.044 60.316 1 NaN NaN 0 85339000 0 85339000 17917 828 6765 6929 28040 28040 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8187 2 590.814053 1179.61355 NaN NaN NaN -0.1151 -6.8004E-05 NaN NaN NaN NaN 69.083 2.4173 69.083 68.501 70.918 0 0 0 0 1.0106E-12 3 41810 130.66 106.89 1 NaN NaN 0 35908000 0 35908000 17918 828 6765 6929 28041;28042;28043 28043 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8141 2 590.814053 1179.61355 NaN NaN NaN 0.52165 0.0003082 NaN NaN NaN NaN 82.823 0.33959 82.823 82.611 82.951 0 0 0 0 8.3464E-08 1 50677 111.61 70.578 1 NaN NaN 0 5465700 5465700 0 17919 828 6765 6929 28044 28044 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8179 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.613 1 44.613 44.113 45.113 0 0 0 0 0.0099272 1 24389 57.59 21.208 1 17920 828 6765 6929 28045 28045 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8145 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.966 1 67.966 67.466 68.466 0 0 0 0 2.0605E-38 1 40310 177.91 127.79 1 17921 828 6765 6929 28046 28046 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8135 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.754 1 68.754 68.254 69.254 0 0 0 0 9.2576E-23 1 40873 153.24 108.85 1 17922 828 6765 6929 28047 28047 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8143 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.109 1 70.109 69.609 70.609 0 0 0 0 3.6338E-05 1 41831 90.15 46.343 1 17923 828 6765 6929 28048 28048 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8142 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.902 1 70.902 70.402 71.402 0 0 0 0 2.9836E-05 1 42411 91.584 49.475 1 17924 828 6765 6929 28049 28049 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8144 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.438 1 72.438 71.938 72.938 0 0 0 0 7.5009E-07 1 43480 107.21 66.176 1 17925 828 6765 6929 28050 28050 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8144 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.189 1 73.189 72.689 73.689 0 0 0 0 0.00055874 1 43941 70.1 34.805 1 17926 828 6765 6929 28051 28051 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8185 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.183 1 78.183 77.683 78.683 0 0 0 0 0.00014589 1 47385 80.688 40.337 1 17927 828 6765 6929 28052 28052 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8149 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.014 1 82.014 81.514 82.514 -7.6294E-06 0 0 0 1.5736E-05 1 50160 94.692 52.583 1 17928 828 6765 6929 28053 28053 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8187 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.457 1 82.457 81.957 82.957 0 0 0 0 4.6972E-05 1 50473 87.806 54.429 1 17929 828 6765 6929 28054 28054 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8146 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.313 1 87.313 86.813 87.813 0 0 0 0 0.015602 1 53801 55.461 28.859 1 17930 828 6765 6929 28055 28055 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.814 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.324 1 87.324 86.824 87.824 0 0 0 0 0.0080591 1 53808 60.064 33.462 1 17931 828 6765 6929 28056 28056 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8179 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.483 1 87.483 86.983 87.983 0 0 0 0 0.024805 1 53912 52.278 28.925 1 17932 828 6765 6929 28057 28057 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8143 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.188 1 90.188 89.688 90.688 0 0 0 0 0.0042142 1 55741 65.157 36.983 1 17933 828 6765 6929 28058 28058 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.815 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.256 1 90.256 89.756 90.756 0 0 0 0 0.00052722 1 55792 70.908 38.554 1 17934 828 6765 6929 28059 28059 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8168 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.088 1 92.088 91.588 92.588 0 0 0 0 0.00056044 1 57036 70.056 39.89 1 17935 828 6765 6929 28060 28060 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8145 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.452 1 92.452 91.952 92.952 0 0 0 0 0.00030223 1 57289 76.679 44.324 1 17936 828 6765 6929 28061 28061 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8146 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.782 1 94.782 94.282 95.282 -7.6294E-06 0 0 0 0.00044847 1 58955 72.928 44.754 1 17937 828 6765 6929 28062 28062 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8182 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.842 1 97.842 97.342 98.342 -7.6294E-06 0 0 0 0.024872 1 61164 52.255 24.046 1 17938 828 6765 6929 28063 28063 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8144 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.17 1 102.17 101.67 102.67 0 0 0 0 0.0030557 1 64443 66.692 34.757 1 17939 828 6765 6929 28064 28064 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.9824 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.43 1 103.43 102.93 103.93 0 0 0 0 0.00029646 1 65422 76.827 51.904 1 17940 828 6765 6929 28065 28065 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.813 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.71 1 106.71 106.21 107.21 0 0 0 0 0.018623 1 67997 54.416 37.877 1 17941 828 6765 6929 28066 28066 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8139 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.77 1 106.77 106.27 107.27 0 0 0 0 0.0059765 1 68048 62.823 34.649 1 17942 828 6765 6929 28067 28067 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8021 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.05 1 115.05 114.55 115.55 0 0 0 0 0.042499 1 74992 46.158 25.533 1 17943 828 6765 6929 28068 28068 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8145 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.22 1 119.22 118.72 119.72 -7.6294E-06 0 0 0 0.0057857 1 78573 63.076 39.12 1 17944 828 6765 6929 28069 28069 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8142 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.09 1 126.09 125.59 126.59 -7.6294E-06 0 0 0 0.0085984 1 84058 59.35 35.195 1 17945 828 6765 6929 28070 28070 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8143 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 143.5 1 143.5 143 144 -1.5259E-05 0 0 0 0.0067641 1 92385 61.78 36.857 1 17946 828 6765 6929 28071 28071 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8187 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 145.27 1 145.27 144.77 145.77 0 0 0 0 0.0077161 1 92757 60.518 31.045 1 17947 828 6765 6929 28072 28072 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.3453 2 590.814053 1179.61355 79406.95 0.86403 0.00051048 -0.33991 -0.00020082 0.52412 0.00030966 590.813703276418 595.818029365149 79.707 0.67554 79.707 79.303 79.979 0 137 54 4 0 0 0 0.032087 1 48472 90.906 65.983 1 0.70848 0.70459 0 11821000 6856000 4964800 17948 828 6765 6929 28073 28073 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.8188 2 590.814053 1179.61355 80526.53 0.55566 0.00032829 0.40232 0.0002377 0.95798 0.00056599 590.813841669601 595.818523871396 53.75 0.62859 53.75 53.45 54.078 0 131 47 4 0 0 0 0.012086 1 26672 51.113 51.113 1 0.72208 0.63647 0 1409700 669070 740640 17949 828 6765 6929 28074 28074 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.8181 2 590.814053 1179.61355 78882.77 0.45101 0.00026647 -0.29807 -0.0001761 0.15295 9.0364E-05 591.315895722896 595.817957041391 83.065 3.1938 83.065 81.78 84.974 0 645 220 8 0 0 0 0.0024806 3 46058 68.893 68.893 1 7.0727 6.0865 0 52788000 2543100 50245000 17950 828 6765 6929 28075;28076;28077 28077 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.8181 2 590.814053 1179.61355 80972.36 0.55143 0.00032579 0.89321 0.00052772 1.4446 0.00085351 590.814066089799 595.818295448516 92.619 1.2124 92.619 91.742 92.955 0 158 70 6 0 0 0 0.02362 1 51680 45.368 36.836 1 0.82665 0.71735 0 2148200 1161700 986490 17951 828 6765 6929 28078 28078 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 590.8146 2 590.814053 1179.61355 NaN NaN NaN 0.34294 0.00020262 NaN NaN NaN NaN 76.21 8.1401 76.21 75.751 83.891 0 0 0 0 1.2599E-11 10 41988 127.4 80.2 1 NaN NaN 0 1026100000 1026100000 0 17952 828 6765 6929 28079;28080;28081;28082;28083;28084;28085;28086;28087;28088 28082 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.8176 2 590.814053 1179.61355 NaN NaN NaN 0.81606 0.00048214 NaN NaN NaN NaN 81.034 1.4093 81.034 80.621 82.03 0 0 0 0 0.0025671 2 43795 79.974 41.888 1 NaN NaN 0 3757300 0 3757300 17953 828 6765 6929 28089;28090 28089 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.8146 2 590.814053 1179.61355 78594.69 0.5895 0.00034829 0.37466 0.00022136 0.96416 0.00056964 590.814056666799 595.818025340882 81.143 3.4602 81.143 80.645 84.105 0 772 216 7 0 0 0 1.4219E-05 5 43115 102.06 102.06 1 0.77743 0.64225 0 8142000 4577900 3564100 17954 828 6765 6929 28091;28092;28093;28094;28095 28091 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.8151 2 590.814053 1179.61355 NaN NaN NaN 0.30429 0.00017978 NaN NaN NaN NaN 76.512 4.6981 76.512 76.021 80.719 0 0 0 0 1.0764E-07 6 40341 109.66 67.555 1 NaN NaN 0 874020000 874020000 0 17955 828 6765 6929 28096;28097;28098;28099;28100;28101 28097 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.8188 2 590.814053 1179.61355 NaN NaN NaN -0.40618 -0.00023997 NaN NaN NaN NaN 83.384 2.9695 83.384 82.016 84.985 0 0 0 0 0.014806 2 44281 58.37 34.941 1 NaN NaN 0 28258000 0 28258000 17956 828 6765 6929 28102;28103 28102 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.8148 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.371 1 84.371 83.871 84.871 0 0 0 0 0.023936 1 45244 52.579 26.842 1 17957 828 6765 6929 28104 28104 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.8142 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.926 1 85.926 85.426 86.426 0 0 0 0 0.016751 1 46262 55.064 29.327 1 17958 828 6765 6929 28105 28105 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.8154 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.989 1 93.989 93.489 94.489 0 0 0 0 0.044784 1 51711 45.368 18.114 1 17959 828 6765 6929 28106 28106 ISGPNPLSCLK 11 1 0 Unmodified _ISGPNPLSCLK_ 0 0 0 Q9BRU9 Q9BRU9 Q9BRU9 UTP23 rRNA-processing protein UTP23 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3184 2 593.318448 1184.62234 79685.65 0.98816 0.00058629 -1.1439 -0.00067867 -0.1557 -9.238E-05 593.317692073896 597.324512311916 79.57 0.37885 79.57 79.373 79.752 0 89 28 5 0 0 0 0.001099 1 48373 70.1 59.39 1 0.72529 0.7398 0 12093000 6996200 5096800 17960 1999 6766 6930 28107 28107 ISGPNPLSCLK 11 1 0 Unmodified _ISGPNPLSCLK_ 0 0 0 Q9BRU9 Q9BRU9 Q9BRU9 UTP23 rRNA-processing protein UTP23 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.3188 2 593.318448 1184.62234 78803.97 0.54528 0.00032352 -1.3574 -0.00080536 -0.81211 -0.00048184 593.318555693412 597.3256561982 92.456 0.52578 92.456 92.17 92.696 0 120 26 8 0 0 0 0.026417 1 51511 40.727 35.525 1 0.98926 0.78427 0 4705700 2628700 2077000 17961 1999 6766 6930 28108 28108 ISGPNPLSCLK 11 1 0 Unmodified _ISGPNPLSCLK_ 0 0 0 Q9BRU9 Q9BRU9 Q9BRU9 UTP23 rRNA-processing protein UTP23 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.3262 2 593.318448 1184.62234 77730.88 0.38944 0.00023106 -1.4403 -0.00085456 -1.0509 -0.00062349 593.318280875109 597.325661685401 92.296 0.5158 92.296 92.012 92.528 0 137 25 8 0 0 0 0.015285 1 50528 46.406 40.625 1 0.84945 0.68298 0 4242000 2579100 1662900 17962 1999 6766 6930 28109 28109 ISGVQVNVK 9 1 0 Unmodified _ISGVQVNVK_ 0 0 0 A0A024RC75;O14647 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.2824 2 472.282192 942.549831 91326.95 0.41151 0.00019435 -0.031529 -1.4891E-05 0.37998 0.00017946 472.282245817565 476.289204872752 42.99 0.40627 42.99 42.83 43.237 0 98 31 4 0 0 0 0.0046249 1 22957 68.787 28.009 1 0.80012 0.81297 0 13740000 8541500 5198100 17963 354 6767 6931 28110 28110 ISGVQVNVK 9 1 0 Unmodified _ISGVQVNVK_ 0 0 0 A0A024RC75;O14647 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 472.282 2 472.282192 942.549831 91682.6 0.14192 6.7028E-05 0.12527 5.9163E-05 0.26719 0.00012619 472.282140513479 476.289420872671 49.964 0.40298 49.964 49.723 50.126 0 96 35 4 0 0 0 0.049038 1 24461 38.419 13.524 1 1.4201 1.1936 0 1901000 683690 1217300 17964 354 6767 6931 28111 28111 ISHELQVK 8 1 0 Unmodified _ISHELQVK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.2813 2 477.274367 952.53418 89335.77 -0.043674 -2.0845E-05 -0.27156 -0.00012961 -0.31523 -0.00015045 477.274059146493 481.281344270512 22.581 0.24105 22.581 22.46 22.701 0 51 15 4 0 0 0 0.011568 1 8638 69.628 35.624 1 1.1378 1.1184 0 8998600 4046900 4951700 17965 1581 6768 6932 28112 28112 ISHLPLVEELR 11 0 1 Unmodified _ISHLPLVEELR_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.9224 3 435.922355 1304.74524 93777.09 0.11623 5.0666E-05 -0.10459 -4.5593E-05 0.011638 5.0732E-06 435.922474970652 439.258101955653 85.545 0.71364 85.545 85.328 86.042 0 174 58 5 0 0 0 0.0062185 2 51445 43.897 43.897 1 1.6183 1.619 0 16416000 5285100 11130000 17966 955 6769 6933 28113;28114 28114 ISIEGNIAAGK 11 1 0 Unmodified _ISIEGNIAAGK_ 0 0 0 D6RCP9;F5CTF3;D6RFG8;P27707 D6RCP9 D6RCP9 DCK Deoxycytidine kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.803 2 536.803488 1071.59242 85164.02 0.67906 0.00036452 -0.13978 -7.5034E-05 0.53928 0.00028949 536.803058269329 540.810450829452 56.937 0.45306 56.937 56.653 57.106 3.8147E-06 107 42 5 0 0 0 0.0064337 1 32078 54.416 21.576 1 2.281 2.3151 0 6100900 2081400 4019500 17967 1200 6770 6934 28115 28115 ISIGGGSCAISGGYGSR 17 0 1 Unmodified _ISIGGGSCAISGGYGSR_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;A0A0S2Z427;CON__P04259;B4DKV4 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 800.3846 2 799.883204 1597.75185 NaN NaN NaN 0.27797 0.00022235 NaN NaN NaN NaN 75.86 0.571 75.86 75.601 76.172 0 0 0 0 0.0010138 2 40286 61.375 54.522 1 NaN NaN 0 9255500 9255500 0 + 17968 859;1154 6771 6935 28116;28117 28116 ISIGGGSCAISGGYGSR 17 0 1 Unmodified _ISIGGGSCAISGGYGSR_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;A0A0S2Z427;CON__P04259;B4DKV4 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.8845 2 799.883204 1597.75185 NaN NaN NaN 0.28953 0.00023159 NaN NaN NaN NaN 76.289 0.64021 76.289 76.009 76.649 0 0 0 0 0.024258 1 39723 38.799 32.415 1 NaN NaN 0 8682000 8682000 0 + 17969 859;1154 6771 6935 28118 28118 ISILEEPSK 9 1 0 Unmodified _ISILEEPSK_ 0 0 0 A0A024R3V0;Q9NUQ6;C9JKE4;F8VZ02;F8VT91;C9JGM8;F8W6C2;C9JW67;B8ZZZ7 A0A024R3V0 A0A024R3V0 DNAPTP6;SPATS2L SPATS2-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 512.2938 2 508.28714 1014.55973 87405.95 0.14971 7.6094E-05 0.52347 0.00026607 0.67318 0.00034217 508.287640595022 512.294395297203 71.142 0.47148 71.142 70.875 71.346 0 84 29 5 0 0 0 0.0049382 2 37437 67.993 25.884 1 1.1412 0.95229 0 2235800 977360 1258400 17970 141 6772 6936 28119;28120 28119 ISILEEPSK 9 1 0 Unmodified _ISILEEPSK_ 0 0 0 A0A024R3V0;Q9NUQ6;C9JKE4;F8VZ02;F8VT91;C9JGM8;F8W6C2;C9JW67;B8ZZZ7 A0A024R3V0 A0A024R3V0 DNAPTP6;SPATS2L SPATS2-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.2943 2 508.28714 1014.55973 87238.95 -0.09732 -4.9467E-05 0.51352 0.00026102 0.4162 0.00021155 508.287294960071 512.294407842111 71.581 0.32491 71.581 71.421 71.746 0 67 20 5 0 0 0 0.063863 1 36901 35.445 2.6042 1 1.0741 0.86779 0 2559500 1222700 1336800 17971 141 6772 6936 28121 28121 ISIMAER 7 0 1 Oxidation (M) _ISIM(ox)AER_ ISIM(1)AER ISIM(46.99)AER 0 1 0 E5KNY5;P42704 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.2254 2 418.220746 834.426938 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.872 1 29.872 29.372 30.372 0 0 0 0 0.05051 1 14515 46.994 15.691 1 17972 1207 6773 6937 28122 28122 921 ISINQALQHAFIQEK 15 1 0 Unmodified _ISINQALQHAFIQEK_ 0 0 0 B4DZQ5;A0A024QZY5;Q13523;H0YDJ3;D3DWH5 B4DZQ5 B4DZQ5 PRPF4B;hCG_1820375 Serine/threonine-protein kinase PRP4 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.3234 3 580.652816 1738.93662 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.092 1 97.092 96.592 97.592 -7.6294E-06 0 0 0 0.014723 1 60619 53.169 41.401 1 17973 33 6774 6938 28123 28123 ISINQALQHAFIQEK 15 1 0 Unmodified _ISINQALQHAFIQEK_ 0 0 0 B4DZQ5;A0A024QZY5;Q13523;H0YDJ3;D3DWH5 B4DZQ5 B4DZQ5 PRPF4B;hCG_1820375 Serine/threonine-protein kinase PRP4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.3242 3 580.652816 1738.93662 82044.98 0.72544 0.00042123 -0.30513 -0.00017717 0.42031 0.00024406 580.986867649429 583.324130317221 110.71 0.31081 110.71 110.58 110.89 -7.6294E-06 54 12 7 0 0 0 0.0061962 2 64057 29.013 29.013 1 0.56737 0.44724 0 3085200 2057000 1028300 17974 33 6774 6938 28124;28125 28124 ISINQALQHAFIQEK 15 1 0 Unmodified _ISINQALQHAFIQEK_ 0 0 0 B4DZQ5;A0A024QZY5;Q13523;H0YDJ3;D3DWH5 B4DZQ5 B4DZQ5 PRPF4B;hCG_1820375 Serine/threonine-protein kinase PRP4 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.9874 3 580.652816 1738.93662 NaN NaN NaN -0.30108 -0.00017482 NaN NaN NaN NaN 110.49 0.3134 110.49 110.31 110.62 0 0 0 0 0.025726 1 62933 30.107 14.223 1 NaN NaN 0 1266000 1266000 0 17975 33 6774 6938 28126 28126 ISISTSGGSFR 11 0 1 Unmodified _ISISTSGGSFR_ 0 0 0 CON__P13647;P13647;F8VV57 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.2913 2 556.290745 1110.56694 NaN NaN NaN 0.11653 6.4825E-05 NaN NaN NaN NaN 56.561 0.83349 56.561 56.273 57.106 0 0 0 0 1.3018E-08 1 32545 116.52 76.249 1 NaN NaN 0 60273000 60273000 0 + 17976 1162 6775 6939 28127 28127 ISISTSGGSFR 11 0 1 Unmodified _ISISTSGGSFR_ 0 0 0 CON__P13647;P13647;F8VV57 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.2895 2 556.290745 1110.56694 NaN NaN NaN -0.096718 -5.3803E-05 NaN NaN NaN NaN 67.676 0.87511 67.676 67.341 68.216 0 0 0 0 0.053247 1 34333 43.308 27.105 1 NaN NaN 0 6853100 6853100 0 + 17977 1162 6775 6939 28128 28128 ISLGLPVGAVINCADNTGAK 20 1 0 Unmodified _ISLGLPVGAVINCADNTGAK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.5267 2 985.522407 1969.03026 60142.5 0.50317 0.00049588 -0.19085 -0.00018808 0.31232 0.0003078 986.023861579569 989.529615960581 116.4 1.1033 116.4 115.98 117.08 0 586 72 12 0 0 0 2.4283E-06 3 74057 67.115 67.115 1 0.7755 0.92893 0 937160000 525490000 411660000 17978 84 6776 6940 28129;28130;28131 28129 ISLGLPVGAVINCADNTGAK 20 1 0 Unmodified _ISLGLPVGAVINCADNTGAK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.5293 2 985.522407 1969.03026 60237.38 0.63571 0.00062651 -0.35383 -0.00034871 0.28188 0.0002778 986.023768390661 989.529379841638 115.87 0.9237 115.87 115.48 116.41 -7.6294E-06 527 59 13 0 0 0 1.2735E-12 2 75493 100.54 100.54 1 0.76046 0.89828 0 1210000000 694950000 515040000 17979 84 6776 6940 28132;28133 28133 ISLGLPVGAVINCADNTGAK 20 1 0 Unmodified _ISLGLPVGAVINCADNTGAK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 986.0244 2 985.522407 1969.03026 59860.84 0.73486 0.00072422 -0.75242 -0.00074153 -0.017557 -1.7303E-05 986.023695510033 989.52924632419 128.22 2.0998 128.22 127.73 129.83 0 579 92 14 0 0 0 8.6505E-10 3 77509 98.943 98.943 1 1.8055 1.6326 0 788270000 285760000 502500000 17980 84 6776 6940 28134;28135;28136 28136 ISLGLPVGAVINCADNTGAK 20 1 0 Unmodified _ISLGLPVGAVINCADNTGAK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 986.0265 2 985.522407 1969.03026 60086.4 0.40395 0.0003981 -0.44663 -0.00044016 -0.042674 -4.2056E-05 985.522991583734 989.529538893375 127.97 1.7877 127.97 127.33 129.12 0 514 73 13 0 0 0 5.5187E-09 3 76482 92.939 92.939 1 1.8764 1.6698 0 1435400000 486790000 948610000 17981 84 6776 6940 28137;28138;28139 28139 ISLHPIEDNPIEEISVLSPEDLEAIK 26 1 0 Unmodified _ISLHPIEDNPIEEISVLSPEDLEAIK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.5156 3 967.509488 2899.50663 61793.63 0.32248 0.000312 0.28088 0.00027175 0.60335 0.00058375 967.844089212931 970.515723536858 132.99 1.3624 132.99 131.99 133.35 0 599 73 13 0 0 0 6.0181E-10 2 86964 57.21 57.21 1 0.89539 1.0142 0 154520000 80218000 74298000 17982 2070 6777 6941 28140;28141 28141 ISLHPIEDNPIEEISVLSPEDLEAIK 26 1 0 Unmodified _ISLHPIEDNPIEEISVLSPEDLEAIK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.5156 3 967.509488 2899.50663 61820.75 0.65366 0.00063242 0.087476 8.4634E-05 0.74113 0.00071705 967.843761616972 970.51585476434 132.32 1.662 132.32 131.49 133.16 0 948 102 12 0 0 0 1.3622E-12 2 88597 66.556 66.556 1 0.87392 0.98217 0 118160000 60121000 58040000 17983 2070 6777 6941 28142;28143 28143 ISLHPIEDNPIEEISVLSPEDLEAIK 26 1 0 Unmodified _ISLHPIEDNPIEEISVLSPEDLEAIK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 967.8436 3 967.509488 2899.50663 61958.23 0.11673 0.00011294 0.049019 4.7426E-05 0.16575 0.00016037 967.843662811788 970.515468619759 134.72 0.54161 134.72 134.45 135 0 60 13 14 0 0 0 0.048455 1 82449 10.516 10.516 1 1.542 1.365 0 312250000 117680000 194570000 17984 2070 6777 6941 28144 28144 ISLHPIEDNPIEEISVLSPEDLEAIK 26 1 0 Unmodified _ISLHPIEDNPIEEISVLSPEDLEAIK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.5153 3 967.509488 2899.50663 61195.09 0.34796 0.00033666 0.092446 8.9442E-05 0.44041 0.0004261 967.84400506525 970.515578652654 134.69 0.35007 134.69 134.5 134.85 0 41 8 11 0 0 0 5.7133E-14 2 81469 82.65 82.65 1 1.5439 1.3438 0 348740000 134550000 214190000 17985 2070 6777 6941 28145;28146 28145 ISLIQIFR 8 0 1 Unmodified _ISLIQIFR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.3148 2 495.310752 988.606951 85292.78 0.57895 0.00028676 -0.33 -0.00016345 0.24895 0.00012331 495.310495827534 500.314557468925 117.32 0.85262 117.32 116.89 117.74 0 275 60 6 0 0 0 0.00097608 2 74885 121.29 58.145 1 0.8484 0.90916 0 45948000 24912000 21037000 17986 1854 6778 6942 28147;28148 28147 ISLIQIFR 8 0 1 Unmodified _ISLIQIFR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.3106 2 495.310752 988.606951 85669.13 0.25403 0.00012582 -0.019479 -9.6483E-06 0.23455 0.00011617 495.310612038603 500.314747788017 116.49 0.79204 116.49 116.2 117 7.6294E-06 251 49 7 0 0 0 0.00070974 2 76144 128.57 46.702 1 0.9457 1.0794 0 50065000 26364000 23701000 17987 1854 6778 6942 28149;28150 28150 ISLIQIFR 8 0 1 Unmodified _ISLIQIFR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.3108 2 495.310752 988.606951 87341.85 0.39676 0.00019652 -0.27265 -0.00013504 0.12411 6.1473E-05 495.310485626268 500.314589421786 129.34 0.61931 129.34 129.07 129.69 0 127 28 6 0 0 0 0.0043182 2 78196 94.006 27.685 1 0.8151 0.69622 0 5750900 3219100 2531800 17988 1854 6778 6942 28151;28152 28152 ISLIQIFR 8 0 1 Unmodified _ISLIQIFR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.3149 2 495.310752 988.606951 87448.51 0.48326 0.00023937 -0.35575 -0.00017621 0.12751 6.3157E-05 495.310490864068 500.314600119729 129.05 0.55206 129.05 128.78 129.33 0 98 22 6 0 0 0 0.0042374 2 77090 94.262 42.316 1 0.77383 0.66884 0 4363000 2162600 2200400 17989 1854 6778 6942 28153;28154 28153 ISLPIEDYFNK 11 1 0 Unmodified _ISLPIEDYFNK_ 0 0 0 B4E014;Q9UBD5;B7Z8A5;B7ZAI3 B4E014 B4E014 ORC3 Origin recognition complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.8591 2 669.850635 1337.68672 77038.76 0.89424 0.00059901 -0.0009914 -6.6409E-07 0.89325 0.00059834 669.850749929595 673.857627306103 113.81 0.5274 113.81 113.55 114.08 0 124 37 5 0 0 0 0.030651 1 72044 38.567 29.384 1 1.5754 1.5598 0 8290600 3381300 4909200 17990 1058 6779 6943 28155 28155 ISLPIEDYFNK 11 1 0 Unmodified _ISLPIEDYFNK_ 0 0 0 B4E014;Q9UBD5;B7Z8A5;B7ZAI3 B4E014 B4E014 ORC3 Origin recognition complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.8579 2 669.850635 1337.68672 77140.23 0.63036 0.00042225 -0.041555 -2.7836E-05 0.5888 0.00039441 669.850608624308 673.857613988045 113.17 0.48827 113.17 112.98 113.47 -7.6294E-06 107 33 4 0 0 0 0.021359 1 73385 43.308 37.527 1 1.2515 1.2641 0 8399300 4453300 3946100 17991 1058 6779 6943 28156 28156 ISLPIEDYFNK 11 1 0 Unmodified _ISLPIEDYFNK_ 0 0 0 B4E014;Q9UBD5;B7Z8A5;B7ZAI3 B4E014 B4E014 ORC3 Origin recognition complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.8596 2 669.850635 1337.68672 73968.34 0.73946 0.00049533 1.1853 0.00079401 1.9248 0.0012893 670.352575266463 673.858864127815 124.78 0.49001 124.78 124.59 125.08 7.6294E-06 108 23 7 0 0 0 0.0023522 2 73908 61.78 25.086 1 1.3565 1.0571 0 3605500 1476500 2129000 17992 1058 6779 6943 28157;28158 28157 ISLPLPNFSSLNLR 14 0 1 Unmodified _ISLPLPNFSSLNLR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.9517 2 785.951215 1569.88788 68459.61 0.53591 0.0004212 0.49434 0.00038853 1.0302 0.00080972 785.951680431739 790.955606680132 128.87 1.1934 128.87 128.71 129.9 0 408 82 9 0 0 0 1.4051E-14 4 83997 133.42 133.42 1 1.4999 1.7762 0 400750000 144130000 256620000 17993 1457 6780 6944 28159;28160;28161;28162 28159 ISLPLPNFSSLNLR 14 0 1 Unmodified _ISLPLPNFSSLNLR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.9561 2 785.951215 1569.88788 68630.94 0.42498 0.00033401 0.64018 0.00050315 1.0652 0.00083716 785.951718091928 790.955703590074 128.48 1.1797 128.48 128.3 129.48 0 613 92 9 0 0 0 1.7193E-29 5 85824 152.64 152.64 1 1.4807 1.7247 0 444710000 171450000 273260000 17994 1457 6780 6944 28163;28164;28165;28166;28167 28164 ISLQAIQQLVR 11 0 1 Unmodified _ISLQAIQQLVR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.889 2 634.887887 1267.76122 76051.96 0.69127 0.00043888 -0.14984 -9.5134E-05 0.54143 0.00034374 635.389183275944 639.891906446452 114.7 0.58885 114.7 114.44 115.03 0 191 39 6 0 0 0 6.1098E-10 1 72750 128.36 128.36 1 1.4361 1.4884 0 20541000 9764100 10777000 17995 39 6781 6945 28168 28168 ISLQAIQQLVR 11 0 1 Unmodified _ISLQAIQQLVR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.8883 2 634.887887 1267.76122 76556.61 0.6587 0.0004182 -0.024088 -1.5293E-05 0.63461 0.00040291 634.887816262322 639.891973271297 114.14 0.66135 114.14 113.84 114.5 0 197 47 6 0 0 0 6.5946E-08 1 74057 114.89 114.89 1 1.341 1.3961 0 22231000 9511700 12719000 17996 39 6781 6945 28169 28169 ISLQAIQQLVR 11 0 1 Unmodified _ISLQAIQQLVR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3942 2 634.887887 1267.76122 75680.26 0.69097 0.00043869 0.3003 0.00019066 0.99127 0.00062934 634.888104676632 639.892341336814 126.82 0.59727 126.82 126.57 127.16 0 86 21 7 0 0 0 0.00046697 2 76338 76.221 76.221 1 1.246 1.0415 0 3492400 1326000 2166400 17997 39 6781 6945 28170;28171 28171 ISLQAIQQLVR 11 0 1 Unmodified _ISLQAIQQLVR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.8925 2 634.887887 1267.76122 76037.5 0.63665 0.0004042 0.022989 1.4595E-05 0.65964 0.0004188 634.887623696053 639.892203734262 126.6 0.45734 126.6 126.4 126.85 0 69 19 5 0 0 0 0.016089 1 75233 45.997 45.997 1 1.3172 1.1491 0 4242800 1934500 2308400 17998 39 6781 6945 28172 28172 ISLSTLQQQLGQPEK 15 1 0 Unmodified _ISLSTLQQQLGQPEK_ 0 0 0 Q9Y5Q9;H7C0C0 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.9607 2 835.459601 1668.90465 67586.66 1.0712 0.00089493 -0.33225 -0.00027758 0.73894 0.00061735 835.459311405336 839.466416610759 96.521 0.43782 96.521 96.359 96.797 0 156 36 6 0 0 0 5.8712E-06 2 58758 96.103 96.103 1 0.94965 0.93841 0 25641000 11827000 13814000 17999 2150 6782 6946 28173;28174 28174 ISLSTLQQQLGQPEK 15 1 0 Unmodified _ISLSTLQQQLGQPEK_ 0 0 0 Q9Y5Q9;H7C0C0 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.461 2 835.459601 1668.90465 67413.8 1.0696 0.00089364 -0.34563 -0.00028876 0.72401 0.00060488 835.960804714704 839.466045285244 95.907 0.47788 95.907 95.623 96.101 0 182 38 7 0 0 0 4.1502E-15 1 59604 128.28 128.28 1 0.98591 1.0855 0 42937000 19784000 23152000 18000 2150 6782 6946 28175 28175 ISLSTLQQQLGQPEK 15 1 0 Unmodified _ISLSTLQQQLGQPEK_ 0 0 0 Q9Y5Q9;H7C0C0 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 835.4601 2 835.459601 1668.90465 NaN NaN NaN -3.3992 -0.0028399 NaN NaN NaN NaN 110.1 0.41843 110.1 109.85 110.26 0 0 0 0 0.04047 1 63534 50.207 36.301 1 NaN NaN 0 3919900 3919900 0 18001 2150 6782 6946 28176 28176 ISLSTLQQQLGQPEK 15 1 0 Unmodified _ISLSTLQQQLGQPEK_ 0 0 0 Q9Y5Q9;H7C0C0 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 835.46 2 835.459601 1668.90465 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.91 1 109.91 109.41 110.41 0 0 0 0 0.0014387 1 62502 86.114 69.089 1 18002 2150 6782 6946 28177 28177 ISNDNPEEHVLK 12 1 0 Unmodified _ISNDNPEEHVLK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8495 2 697.849155 1393.68376 73616.18 0.42879 0.00029923 0.48046 0.00033529 0.90925 0.00063452 697.849181489142 701.856442061481 30.343 0.46397 30.343 30.068 30.532 1.9073E-06 115 38 6 0 0 0 0.0007952 2 14863 65.695 65.695 1 0.72945 0.7341 0 16090000 6802400 9287500 18003 878 6783 6947 28178;28179 28178 ISNFLLEK 8 1 0 Unmodified _ISNFLLEK_ 0 0 0 Q4KMR3;Q12965;Q6ZNI9;O00160;B0I1T1;Q4LE34;Q14779;B4DVP3;H0YLJ4;Q92827 Q4KMR3 Q4KMR3 MYO1E;FLJ00395;MYO1F;MYO1F variant protein Unconventional myosin-Ie;Unconventional myosin-If MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.2861 2 482.279118 962.543683 88901.4 -0.080304 -3.8729E-05 0.2084 0.00010051 0.1281 6.178E-05 482.27916546347 486.286251014999 77.284 1.0616 77.284 76.725 77.787 0 269 89 4 0 0 0 0.0075918 2 45702 82.279 30.706 1 0.92677 0.98708 0 15944000 8218000 7725700 18004 1703 6784 6948 28180;28181 28181 ISNIPSLIFLDATTGK 16 1 0 Unmodified _ISNIPSLIFLDATTGK_ 0 0 0 Q6DKJ4 Q6DKJ4 Q6DKJ4 NXN Nucleoredoxin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.9848 2 845.47472 1688.93489 68147.04 0.98407 0.000832 -0.041597 -3.5169E-05 0.94247 0.00079684 845.976435366132 849.481962789789 126 0.41043 126 125.82 126.23 0 115 31 5 0 0 0 0.025678 1 81905 25.914 20.42 1 2.2513 2.2661 0 5316400 1880900 3435500 18005 1841 6785 6949 28182 28182 ISNIPSLIFLDATTGK 16 1 0 Unmodified _ISNIPSLIFLDATTGK_ 0 0 0 Q6DKJ4 Q6DKJ4 Q6DKJ4 NXN Nucleoredoxin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.4833 2 845.47472 1688.93489 NaN NaN NaN -0.37046 -0.00031321 NaN NaN NaN NaN 125.59 0.35318 125.59 125.4 125.75 0 0 0 0 0.00019313 1 83616 72.089 32.824 1 NaN NaN 0 3860300 0 3860300 18006 1841 6785 6949 28183 28183 ISNPTEFQNHEK 12 1 0 Unmodified _ISNPTEFQNHEK_ 0 0 0 Q9BXS6 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.9003 3 481.900279 1442.67901 94225.65 0.21028 0.00010133 0.38119 0.0001837 0.59147 0.00028503 481.900221908976 484.572354774334 26.312 0.33946 26.312 26.176 26.516 0 70 21 5 0 0 0 0.027638 1 11821 26.112 26.112 1 0.35696 0.37302 0 12139000 6913300 5225500 18007 2014 6786 6950 28184 28184 ISNPTEFQNHEK 12 1 0 Unmodified _ISNPTEFQNHEK_ 0 0 0 Q9BXS6 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.8985 3 481.900279 1442.67901 87079.78 0.29863 0.00014391 -0.66839 -0.0003221 -0.36976 -0.00017819 481.899844730446 484.571406571282 25.889 0.41155 25.889 25.745 26.157 0 78 25 6 0 0 0 0.0061329 1 11399 39.73 39.73 1 0.39561 0.41041 0 18811000 11774000 7037500 18008 2014 6786 6950 28185 28185 ISNQVDLSNVCAQYR 15 0 1 Unmodified _ISNQVDLSNVCAQYR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.9334 2 883.928142 1765.84173 NaN NaN NaN 0.42719 0.00037761 NaN NaN NaN NaN 73.056 0.33116 73.056 72.864 73.195 -7.6294E-06 0 0 0 2.6063E-23 1 43826 140.24 114.81 1 NaN NaN 0 10233000 0 10233000 18009 39 6787 6951 28186 28186 ISNQVDLSNVCAQYR 15 0 1 Unmodified _ISNQVDLSNVCAQYR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 883.9282 2 883.928142 1765.84173 66330.74 0.46542 0.00041139 0.082822 7.3208E-05 0.54824 0.0004846 883.92774516052 888.932167648085 84.928 0.40643 84.928 84.763 85.17 0 86 28 4 0 0 0 0.019495 1 46451 31.431 31.431 1 1.1877 1.0141 0 2781500 1299200 1482300 18010 39 6787 6951 28187 28187 ISNQVDLSNVCAQYR 15 0 1 Unmodified _ISNQVDLSNVCAQYR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 889.4354 2 883.928142 1765.84173 65490.4 0.31612 0.00027943 0.33343 0.00029473 0.64955 0.00057416 884.429316741115 888.932217383838 85.199 0.36965 85.199 84.964 85.333 0 92 24 6 0 0 0 0.035363 1 45736 31.228 31.228 1 1.2761 1.143 0 2292200 964460 1327800 18011 39 6787 6951 28188 28188 ISNTAISISDHTALAQFCK 19 1 0 Unmodified _ISNTAISISDHTALAQFCK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.0259 3 693.017606 2076.03099 NaN NaN NaN 0.17976 0.00012458 NaN NaN NaN NaN 88.591 0.61605 88.591 88.417 89.033 0 0 0 0 3.6531E-18 2 53380 114.55 104.8 1 NaN NaN 0 14934000 0 14934000 18012 1507 6788 6952 28189;28190 28190 ISNTAISISDHTALAQFCK 19 1 0 Unmodified _ISNTAISISDHTALAQFCK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.3522 3 693.017606 2076.03099 72296.61 0.79758 0.00055274 -0.14846 -0.00010288 0.64913 0.00044986 693.016753293503 696.023644353588 87.657 0.59267 87.657 87.311 87.904 0 164 44 6 0 0 0 3.6304E-13 5 53959 95.666 95.666 1 2.3226 2.3642 0 30563000 10530000 20033000 18013 1507 6788 6952 28191;28192;28193;28194;28195 28192 ISNTAISISDHTALAQFCK 19 1 0 Unmodified _ISNTAISISDHTALAQFCK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.0237 3 693.017606 2076.03099 73351.37 0.36331 0.00025178 -0.025357 -1.7573E-05 0.33795 0.00023421 693.351734429315 695.689267984753 101.73 0.41075 101.73 101.52 101.93 0 99 26 6 0 0 0 0.052368 1 57645 7.3604 7.3604 1 1.4118 1.1174 0 4174300 2128900 2045400 18014 1507 6788 6952 28196 28196 ISPGGISQILDLVK 14 1 0 Unmodified _ISPGGISQILDLVK_ 0 0 0 A8K7A0;P49643 A8K7A0 A8K7A0 PRIM2 DNA primase large subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.434 2 720.427042 1438.83953 76040.18 0.77803 0.00056051 -0.14653 -0.00010556 0.6315 0.00045495 720.427483845634 724.433930504603 128.29 0.34306 128.29 128.14 128.48 0 86 24 5 0 0 0 7.4827E-05 1 83673 89.301 79.645 1 1.4627 1.4914 0 4461400 1734800 2726600 18015 768 6789 6953 28197 28197 ISPGGISQILDLVK 14 1 0 Unmodified _ISPGGISQILDLVK_ 0 0 0 A8K7A0;P49643 A8K7A0 A8K7A0 PRIM2 DNA primase large subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.437 2 720.427042 1438.83953 75314.21 1.0862 0.00078255 0.23224 0.00016731 1.3185 0.00094986 720.928491968826 724.434252090987 127.85 0.38345 127.85 127.72 128.1 0 68 24 4 0 0 0 0.0069087 1 85416 41.283 32.095 1 1.8805 1.9667 0 10316000 3218900 7096800 18016 768 6789 6953 28198 28198 ISQSNYIPTQQDVLR 15 0 1 Unmodified _ISQSNYIPTQQDVLR_ 0 0 0 P08754 P08754 P08754 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.4647 2 881.460133 1760.90571 NaN NaN NaN -0.54486 -0.00048028 NaN NaN NaN NaN 80.633 0.42779 80.633 80.383 80.811 0 0 0 0 0.0049508 1 47849 56.225 38.416 1 NaN NaN 0 7309600 0 7309600 18017 1458 6790 6954 28199 28199 ISRPHPSTAESK 12 1 1 Unmodified _ISRPHPSTAESK_ 0 0 1 Q71RC2;X6RLN4 Q71RC2 Q71RC2 LARP4 La-related protein 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.5924 3 437.233481 1308.67861 90495.03 -0.45583 -0.0001993 -0.13797 -6.0326E-05 -0.5938 -0.00025963 437.567844442709 443.241039850718 15.077 0.39458 15.077 14.979 15.374 9.5367E-07 20 10 4 0 0 0 0.020859 1 2715 37.613 23.934 1 2.5568 2.8113 0 4413600 1138800 3274900 18018 1868 6791 6955 28200 28200 ISSFRPVEDITEEDLENVAITVR 23 0 2 Unmodified _ISSFRPVEDITEEDLENVAITVR_ 0 0 1 A8K8X5;A0A024RA51;Q96GN5 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 884.7952 3 878.120335 2631.33918 66173.7 0.81354 0.00071439 -0.39949 -0.0003508 0.41405 0.00036358 878.453915068934 885.12680555662 128.9 0.47693 128.9 128.74 129.22 0 138 22 9 0 0 0 0.059846 1 77895 11.943 11.943 1 0.85737 0.72821 0 8075300 4177800 3897500 18019 295 6792 6956 28201 28201 ISSIQSIVPALEIANAHR 18 0 1 Unmodified _ISSIQSIVPALEIANAHR_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z5E7;B7Z4F6;B7Z532;Q53QD5 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.6984 3 640.361813 1918.06361 76087.95 0.80931 0.00051825 -0.031844 -2.0392E-05 0.77746 0.00049786 640.696004452846 643.697975518769 111.2 0.59377 111.2 110.87 111.46 0 198 40 6 0 0 0 1.0937E-05 2 69895 62.765 62.765 1 1.5991 1.6764 0 39282000 14218000 25065000 18020 143 6793 6957 28202;28203 28202 ISSIQSIVPALEIANAHR 18 0 1 Unmodified _ISSIQSIVPALEIANAHR_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z5E7;B7Z4F6;B7Z532;Q53QD5 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.033 3 640.361813 1918.06361 76045.59 0.74275 0.00047563 -0.092537 -5.9257E-05 0.65021 0.00041637 640.361776409554 643.697765155127 110.43 0.57394 110.43 110.16 110.74 0 227 40 7 0 0 0 1.7688E-07 1 71069 87.088 87.088 1 1.5875 1.7379 0 32815000 13774000 19041000 18021 143 6793 6957 28204 28204 ISSIQSIVPALEIANAHR 18 0 1 Unmodified _ISSIQSIVPALEIANAHR_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z5E7;B7Z4F6;B7Z532;Q53QD5 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.3619 3 640.361813 1918.06361 75391.48 0.89252 0.00057154 0.048741 3.1212E-05 0.94126 0.00060275 640.69604339062 643.697665549114 121.95 0.40436 121.95 121.7 122.1 0 67 17 5 0 0 0 0.019632 1 71782 31.951 31.951 1 0.8397 0.69217 0 8343500 3914300 4429200 18022 143 6793 6957 28205 28205 ISSLLAELEAIQR 13 0 1 Unmodified _ISSLLAELEAIQR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.9195 2 721.914298 1441.81404 71716.69 0.8601 0.00062092 0.27443 0.00019812 1.1345 0.00081904 721.914286301935 726.918483468171 122.01 0.59245 122.01 121.75 122.34 0 216 39 8 0 0 0 2.7519E-13 4 78830 126.19 126.19 1 0.72829 0.74455 0 31446000 19484000 11962000 18023 44 6794 6958 28206;28207;28208;28209 28207 ISSLLAELEAIQR 13 0 1 Unmodified _ISSLLAELEAIQR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.4176 2 721.914298 1441.81404 71943.26 1.0249 0.00073989 0.050034 3.6121E-05 1.0749 0.00077601 721.914122841553 726.918402884259 121.46 0.58964 121.46 121.2 121.79 0 235 43 8 0 0 0 2.8294E-09 2 80333 122.42 122.42 1 0.69058 0.75451 0 37259000 22702000 14556000 18024 44 6794 6958 28210;28211 28210 ISSLLAELEAIQR 13 0 1 Unmodified _ISSLLAELEAIQR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.9158 2 721.914298 1441.81404 71522.94 1.1258 0.00081275 0.29458 0.00021266 1.4204 0.0010254 721.914288265041 726.918609136727 134.46 0.33295 134.46 134.37 134.7 0 40 11 7 0 0 0 3.7216E-19 2 82103 147.37 147.37 1 1.5732 1.2973 0 18571000 6706800 11864000 18025 44 6794 6958 28212;28213 28212 ISSLLAELEAIQR 13 0 1 Unmodified _ISSLLAELEAIQR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.9143 2 721.914298 1441.81404 71778.15 0.92591 0.00066842 0.041871 3.0227E-05 0.96778 0.00069865 721.914223593097 726.918475770738 134.37 0.26366 134.37 134.24 134.5 0 50 10 7 0 0 0 2.8581E-13 2 81095 125.74 125.74 1 1.5025 1.2762 0 19040000 8278100 10762000 18026 44 6794 6958 28214;28215 28215 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.9001 2 753.893563 1505.77257 68991.19 0.79592 0.00060004 -0.24423 -0.00018412 0.55169 0.00041591 753.893644256758 757.900386734726 80.647 1.3476 80.647 80.207 81.555 0 967 115 13 0 0 0 8.2009E-123 3 47746 261.16 231.39 1 0.77726 0.93686 0 1400600000 803410000 597190000 18027 1635 6795 6959 28216;28217;28218 28216 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.897 2 753.893563 1505.77257 NaN NaN NaN -0.58393 -0.00044022 NaN NaN NaN NaN 82.628 0.18392 82.628 82.564 82.748 0 0 0 0 6.0322E-09 2 49386 110.38 63.92 1 NaN NaN 0 4467900 4467900 0 18028 1635 6795 6959 28219;28220 28220 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.9016 2 753.893563 1505.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.847 1 81.847 81.347 82.347 0 0 0 0 2.1783E-10 1 48820 110.38 81.655 1 18029 1635 6795 6959 28221 28221 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.9001 2 753.893563 1505.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.411 1 83.411 82.911 83.911 0 0 0 0 0.0007664 1 49931 80.706 55.852 1 18030 1635 6795 6959 28222 28222 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.9001 2 753.893563 1505.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.424 1 83.424 82.924 83.924 0 0 0 0 9.7298E-07 1 49939 104.43 74.679 1 18031 1635 6795 6959 28223 28223 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.8925 2 753.893563 1505.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.993 1 83.993 83.493 84.493 0 0 0 0 0.0016498 1 50306 71.03 33.839 1 18032 1635 6795 6959 28224 28224 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.8945 2 753.893563 1505.77257 69180.69 0.83506 0.00062954 -0.32952 -0.00024842 0.50554 0.00038112 753.893592679678 757.900306998277 79.539 1.3327 79.539 79.209 80.542 0 797 108 10 0 0 0 4.3246E-143 4 48729 276.13 248.36 1 0.76852 0.90835 0 1451400000 828070000 623330000 18033 1635 6795 6959 28225;28226;28227;28228 28227 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.9016 2 753.893563 1505.77257 NaN NaN NaN 0.50856 0.0003834 NaN NaN NaN NaN 80.816 1.0063 80.816 80.354 81.36 -7.6294E-06 0 0 0 8.2527E-38 2 49231 161.17 139.43 1 NaN NaN 0 17126000 0 17126000 18034 1635 6795 6959 28229;28230 28229 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.9011 2 753.893563 1505.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.345 1 82.345 81.845 82.845 0 0 0 0 0.0020684 1 50395 68.847 50.579 1 18035 1635 6795 6959 28231 28231 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.9009 2 753.893563 1505.77257 69842.09 0.67574 0.00050944 -0.37656 -0.00028388 0.29919 0.00022556 753.894066527628 757.900373979999 92.197 3.5419 92.197 91.766 95.308 0 1412 224 12 0 0 0 4.5325E-89 9 51702 233.45 214.21 1 0.92973 0.83678 0 643480000 328110000 315360000 18036 1635 6795 6959 28232;28233;28234;28235;28236;28237;28238;28239;28240 28235 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.8995 2 753.893563 1505.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.081 1 95.081 94.581 95.581 0 0 0 0 0.00053373 1 53248 83.862 57.076 1 18037 1635 6795 6959 28241 28241 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 753.8953 2 753.893563 1505.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.388 1 96.388 95.888 96.888 0 0 0 0 0.0018355 1 54098 69.672 45.582 1 18038 1635 6795 6959 28242 28242 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.8939 2 753.893563 1505.77257 70011.97 0.37784 0.00028485 -0.23981 -0.00018079 0.13803 0.00010406 753.894233486357 757.900385465962 92.121 3.4753 92.121 91.622 95.098 0 1214 214 12 0 0 0 2.9485E-61 7 50793 210.27 210.27 1 0.92983 0.81485 0 539090000 280770000 258320000 18039 1635 6795 6959 28243;28244;28245;28246;28247;28248;28249 28246 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.901 2 753.893563 1505.77257 69661.26 0.40519 0.00030547 0.070375 5.3055E-05 0.47557 0.00035853 753.893576226014 757.901108021614 95.994 1.2137 95.994 95.445 96.658 -7.6294E-06 186 77 4 0 0 0 0.0090055 1 52848 43.297 38.684 1 0.83562 0.67734 0 2766900 1533200 1233800 18040 1635 6795 6959 28250 28250 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.9014 2 753.893563 1505.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.358 1 93.358 92.858 93.858 0 0 0 0 3.7445E-38 1 51294 160.53 117.79 1 18041 1635 6795 6959 28251 28251 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.901 2 753.893563 1505.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.124 1 94.124 93.624 94.624 0 0 0 0 1.0613E-10 1 51795 115.57 79.922 1 18042 1635 6795 6959 28252 28252 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.9014 2 753.893563 1505.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.934 1 94.934 94.434 95.434 0 0 0 0 3.1015E-16 1 52346 122.96 98.497 1 18043 1635 6795 6959 28253 28253 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.8925 2 753.893563 1505.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.634 1 96.634 96.134 97.134 0 0 0 0 0.0013012 1 53456 74.849 37.504 1 18044 1635 6795 6959 28254 28254 ISSQQNPNSNTLGHILCVIGHIAK 24 1 0 Unmodified _ISSQQNPNSNTLGHILCVIGHIAK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.3461 4 651.094602 2600.3493 73242.82 0.8895 0.00057915 -1.0165 -0.00066183 -0.12699 -8.2681E-05 651.345204536229 653.347745595016 128.51 0.24162 128.51 128.35 128.59 0 35 9 5 0 0 0 0.0049677 1 76697 26.5 23.139 1 2.0845 1.6975 0 6819100 2115800 4703300 18045 1565 6796 6960 28255 28255 ISSSSFSR 8 0 1 Unmodified _ISSSSFSR_ 0 0 0 CON__P05787;P05787;F8VUG2;F8W1U3;F8VQY3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.7194 2 435.719424 869.424296 90404.1 0.25128 0.00010949 -0.15916 -6.9348E-05 0.092127 4.0141E-05 435.719339151539 440.723387796118 24.249 0.85452 24.249 23.976 24.831 0 155 36 8 0 0 0 0.00087588 3 9959 126.28 18.684 1 1.2213 1.4461 0 386900000 173920000 212970000 + 18046 1156 6797 6961 28256;28257;28258 28257 ISSSSFSR 8 0 1 Unmodified _ISSSSFSR_ 0 0 0 CON__P05787;P05787;F8VUG2;F8W1U3;F8VQY3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.7195 2 435.719424 869.424296 90002.2 -0.15153 -6.6026E-05 -0.20938 -9.1232E-05 -0.36091 -0.00015726 435.719230650459 440.723351295726 24.003 0.70995 24.003 23.748 24.458 0 124 28 8 0 0 0 2.494E-05 2 9781 139.68 19.191 1 1.0431 1.195 0 170980000 82984000 87995000 + 18047 1156 6797 6961 28259;28260 28260 ISSVLAGGSCR 11 0 1 Unmodified _ISSVLAGGSCR_ 0 0 0 CON__P02533;P02533;K7ENV3;CON__P08779;P08779 CON__P02533;CON__P08779 CON__P02533 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.7844 2 553.784773 1105.55499 NaN NaN NaN -0.19017 -0.00010531 NaN NaN NaN NaN 36.912 0.57038 36.912 36.633 37.203 0 0 0 0 4.0792E-22 1 18669 145.9 107.67 1 NaN NaN 0 72023000 72023000 0 + 18048 1150;1159 6798 6962 28261 28261 ISSVLAGGSCR 11 0 1 Unmodified _ISSVLAGGSCR_ 0 0 0 CON__P02533;P02533;K7ENV3;CON__P08779;P08779 CON__P02533;CON__P08779 CON__P02533 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.7847 2 553.784773 1105.55499 NaN NaN NaN -0.29245 -0.00016195 NaN NaN NaN NaN 41.659 0.74662 41.659 41.364 42.111 0 0 0 0 0.0022775 1 19299 76.143 48.618 1 NaN NaN 0 7924400 7924400 0 + 18049 1150;1159 6798 6962 28262 28262 ISSVLAGGSCR 11 0 1 Unmodified _ISSVLAGGSCR_ 0 0 0 CON__P02533;P02533;K7ENV3;CON__P08779;P08779 CON__P02533;CON__P08779 CON__P02533 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.7849 2 553.784773 1105.55499 NaN NaN NaN -0.074458 -4.1234E-05 NaN NaN NaN NaN 41.771 0.75688 41.771 41.434 42.191 0 0 0 0 0.00069851 1 18889 88.681 61.156 1 NaN NaN 0 7228300 7228300 0 + 18050 1150;1159 6798 6962 28263 28263 ISSVQFHPGAQIVMVAGLDNAVSLFQVDGK 30 1 0 Oxidation (M) _ISSVQFHPGAQIVM(ox)VAGLDNAVSLFQVDGK_ ISSVQFHPGAQIVM(1)VAGLDNAVSLFQVDGK ISSVQFHPGAQIVM(40.84)VAGLDNAVSLFQVDGK 0 1 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1048.8801 3 1048.54465 3142.61212 59004.61 0.79056 0.00082893 -0.067058 -7.0313E-05 0.7235 0.00075862 1048.87923989925 1051.88427180591 126.73 0.84878 126.73 126.28 127.13 0 404 58 9 0 0 0 3.0893E-07 1 82454 40.837 40.837 1 1.726 1.6905 0 22052000 8088200 13963000 18051 876 6799 6963 28264 28264 683 ISTINILLSTLK 12 1 0 Unmodified _ISTINILLSTLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.9155 2 658.413403 1314.81225 74751.01 1.2161 0.00080071 0.050692 3.3376E-05 1.2668 0.00083409 658.413334819385 662.420347277179 127.23 0.59515 127.23 126.93 127.52 0 175 33 8 0 0 0 1.6998E-05 2 82732 104.79 92.456 1 1.1918 1.1684 0 22549000 10643000 11906000 18052 1392 6800 6964 28265;28266 28266 ISTINILLSTLK 12 1 0 Unmodified _ISTINILLSTLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.4211 2 658.413403 1314.81225 75595.9 0.96507 0.00063541 0.49015 0.00032272 1.4552 0.00095814 658.413338435722 662.420492278623 126.72 0.59 126.72 126.43 127.02 0 221 36 8 0 0 0 6.1296E-13 2 84411 133.89 120.12 1 1.3638 1.38 0 26648000 10219000 16429000 18053 1392 6800 6964 28267;28268 28268 ISTITPQIQAFNLQK 15 1 0 Unmodified _ISTITPQIQAFNLQK_ 0 0 0 B4DL80;G5EA36;P30260;I0EZ68;I3L328 B4DL80 B4DL80 CDC27 Cell division cycle protein 27 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.4897 2 851.480337 1700.94612 72300.3 0.92767 0.00078989 0.935 0.00079613 1.8627 0.001586 851.983756245698 855.487614534122 104.69 0.29859 104.69 104.5 104.8 7.6294E-06 37 22 4 0 0 0 0.0013902 1 66337 47.894 47.894 1 1.4625 1.4795 0 8990400 4646900 4343500 18054 995 6801 6965 28269 28269 ISTLPQLNSALVQDLAK 17 1 0 Unmodified _ISTLPQLNSALVQDLAK_ 0 0 0 P14635 P14635 P14635 CCNB1 G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 906.0194 2 906.017283 1810.02001 64696.66 0.81778 0.00074093 -0.047513 -4.3048E-05 0.77027 0.00069788 906.017253182739 910.024399234461 120 0.58067 120 119.7 120.28 0 297 40 11 0 0 0 3.9968E-07 2 77141 96.464 96.464 1 0.77875 0.8815 0 101000000 58540000 42460000 18055 1483 6802 6966 28270;28271 28271 ISTLPQLNSALVQDLAK 17 1 0 Unmodified _ISTLPQLNSALVQDLAK_ 0 0 0 P14635 P14635 P14635 CCNB1 G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 910.5267 2 906.017283 1810.02001 64399.7 0.75764 0.00068644 -0.12207 -0.0001106 0.63557 0.00057584 906.518663844522 910.024289048433 119.44 0.59048 119.44 119.16 119.75 0 315 42 10 0 0 0 6.8737E-09 2 78657 100.55 100.55 1 0.759 0.84851 0 103550000 58809000 44741000 18056 1483 6802 6966 28272;28273 28273 ISTLPQLNSALVQDLAK 17 1 0 Unmodified _ISTLPQLNSALVQDLAK_ 0 0 0 P14635 P14635 P14635 CCNB1 G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 906.0182 2 906.017283 1810.02001 63782.16 1.0111 0.00091611 0.032065 2.9051E-05 1.0432 0.00094516 906.017258607568 910.024246252535 132.84 0.80801 132.83 132.57 133.37 -1.5259E-05 196 37 10 0 0 0 7.4592E-18 2 80810 127.02 127.02 1 1.2521 1.0516 0 53237000 23752000 29485000 18057 1483 6802 6966 28274;28275 28275 ISTLPQLNSALVQDLAK 17 1 0 Unmodified _ISTLPQLNSALVQDLAK_ 0 0 0 P14635 P14635 P14635 CCNB1 G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 910.5266 2 906.017283 1810.02001 64145.11 0.97598 0.00088425 -0.27755 -0.00025146 0.69843 0.00063279 906.518841172365 910.023923367864 132.58 0.59624 132.58 132.33 132.93 0 156 25 10 0 0 0 2.2142E-25 2 79701 145.81 145.81 1 1.2483 1.0406 0 41097000 18716000 22381000 18058 1483 6802 6966 28276;28277 28276 ISVATGALEAAQGSK 15 1 0 Unmodified _ISVATGALEAAQGSK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.8884 2 701.880456 1401.74636 NaN NaN NaN 0.12609 8.8503E-05 NaN NaN NaN NaN 67.752 0.34775 67.752 67.546 67.894 0 0 0 0 1.5086E-07 1 39222 103.88 65.794 1 NaN NaN 0 5976300 0 5976300 18059 680 6803 6967 28278 28278 ISVATGALEAAQGSK 15 1 0 Unmodified _ISVATGALEAAQGSK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.8809 2 701.880456 1401.74636 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.715 1 67.715 67.215 68.215 0 0 0 0 0.0014261 1 39174 82.85 56.336 1 18060 680 6803 6967 28279 28279 ISVATGALEAAQGSK 15 1 0 Unmodified _ISVATGALEAAQGSK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.8873 2 701.880456 1401.74636 72784.64 0.53649 0.00037655 0.30967 0.00021735 0.84616 0.0005939 701.880616779807 705.887965850379 77.796 0.45242 77.796 77.596 78.048 0 107 29 5 0 0 0 0.00022025 1 41624 64.121 58.919 1 1.3991 1.1462 0 2594100 891490 1702700 18061 680 6803 6967 28280 28280 ISVATGALEAAQGSK 15 1 0 Unmodified _ISVATGALEAAQGSK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.8881 2 701.880456 1401.74636 73776.59 0.60555 0.00042502 0.41264 0.00028962 1.0182 0.00071464 701.880731302 705.887874946409 78.098 0.43948 78.098 77.905 78.345 0 98 28 5 0 0 0 0.00022275 2 41025 67.997 61.694 1 1.6038 1.2998 0 2689600 1030200 1659400 18062 680 6803 6967 28281;28282 28281 ISVDITLALESK 12 1 0 Unmodified _ISVDITLALESK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.8811 2 644.871568 1287.72858 76677.16 1.3124 0.00084633 0.65184 0.00042035 1.9642 0.0012667 644.873144172965 648.878898422949 110.46 0.35706 110.46 110.31 110.67 0 61 27 4 0 0 0 0.017891 1 69377 41.164 20.165 1 1.4139 1.5204 0 32907000 4797100 28110000 18063 1914 6804 6968 28283 28283 ISVDITLALESK 12 1 0 Unmodified _ISVDITLALESK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8738 2 644.871568 1287.72858 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.46 1 110.46 109.96 110.96 -7.6294E-06 0 0 0 0.0026022 1 69379 67.93 35.516 1 18064 1914 6804 6968 28284 28284 ISVDITLALESK 12 1 0 Unmodified _ISVDITLALESK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.8798 2 644.871568 1287.72858 NaN NaN NaN 1.4329 0.00092407 NaN NaN NaN NaN 110.89 0.57591 110.89 110.68 111.25 0 0 0 0 0.018103 1 71494 51.927 29.285 1 NaN NaN 0 2550300 0 2550300 18065 1914 6804 6968 28285 28285 ISVFRPGLR 9 0 2 Unmodified _ISVFRPGLR_ 0 0 1 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 348.8828 3 348.881943 1043.624 100333.4 0.21859 7.6262E-05 0.084617 2.9521E-05 0.30321 0.00010578 348.881916448762 355.554081452604 58.11 0.76498 58.11 57.779 58.544 -3.8147E-06 282 61 8 0 0 0 0.0072421 2 32808 47.198 32.531 1 0.81259 0.88625 0 133750000 69250000 64499000 18066 666 6805 6969 28286;28287 28286 ISVFRPGLR 9 0 2 Unmodified _ISVFRPGLR_ 0 0 1 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 355.5542 3 348.881943 1043.624 100755.6 -0.027544 -9.6097E-06 -0.088586 -3.0906E-05 -0.11613 -4.0516E-05 348.881873518069 355.55397575336 56.278 0.96478 56.278 55.641 56.606 0 380 74 7 0 0 0 0.019671 1 32086 40.994 26.991 1 0.79579 0.9153 0 57817000 31681000 26137000 18067 666 6805 6969 28288 28288 ISVLYSFLR 9 0 1 Unmodified _ISVLYSFLR_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.3228 2 549.321317 1096.62808 79824.35 0.843 0.00046308 -0.57087 -0.00031359 0.27212 0.00014948 549.321274295287 554.325024853587 114.98 0.51596 114.98 114.77 115.29 0 140 33 5 0 0 0 0.0016784 1 73029 82.279 70.51 1 0.78164 0.78712 0 15752000 8254400 7497800 18068 1708 6806 6970 28289 28289 ISVLYSFLR 9 0 1 Unmodified _ISVLYSFLR_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.3218 2 549.321317 1096.62808 83417.48 0.7114 0.00039079 -0.32562 -0.00017887 0.38578 0.00021191 549.321269430939 554.324889958932 114.22 0.53169 114.22 114.04 114.57 0 121 36 5 0 0 0 0.0018606 1 74202 79.906 71.675 1 0.75843 0.75363 0 7429800 3538000 3891800 18069 1708 6806 6970 28290 28290 ISVLYSFLR 9 0 1 Unmodified _ISVLYSFLR_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.3262 2 549.321317 1096.62808 83589.58 0.70787 0.00038885 0.030201 1.659E-05 0.73807 0.00040544 549.321090351985 554.325337208138 126.53 0.53961 126.53 126.24 126.78 0 73 18 6 0 0 0 0.027097 2 76215 47.198 47.198 1 0.82513 0.71571 0 2109100 1129400 979670 18070 1708 6806 6970 28291;28292 28292 ISVLYSFLR 9 0 1 Unmodified _ISVLYSFLR_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.8232 2 549.321317 1096.62808 83213.87 0.60793 0.00033395 -0.13295 -7.303E-05 0.47499 0.00026092 549.321267408609 554.325151559783 126.26 0.49409 126.26 126.05 126.55 0 95 21 6 0 0 0 0.057174 1 74958 36.334 36.334 1 0.76718 0.68598 0 1974500 1118500 855930 18071 1708 6806 6970 28293 28293 ISVNDFIIK 9 1 0 Unmodified _ISVNDFIIK_ 0 0 0 Q01991;B4DS43;B4DLQ2;H0YDD4;E9PEJ4;B4DJX1;Q86YI5;A0A024R3D8;P10515 Q01991 Q01991 DLAT Acetyltransferase component of pyruvate dehydrogenase complex;Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.8124 2 524.8055 1047.59645 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.12 1 104.12 103.62 104.62 0 0 0 0 0.011752 1 64301 61.962 27.155 1 18072 134 6807 6971 28294 28294 ISVYYNEATGGK 12 1 0 Unmodified _ISVYYNEATGGK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMU8;B4DMJ5 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3226 2 651.322242 1300.62993 73359.16 0.66648 0.0004341 0.188 0.00012245 0.85448 0.00055654 651.322219959262 655.329400955238 50.076 1.2025 50.076 49.701 50.904 0 643 110 10 0 0 0 3.4185E-08 3 27483 117.67 89.931 1 1.482 1.7746 0 917610000 366210000 551400000 18073 1452 6808 6972 28295;28296;28297 28296 ISVYYNEATGGK 12 1 0 Unmodified _ISVYYNEATGGK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMU8;B4DMJ5 Q5JP53 Q5JP53 TUBB Tubulin beta chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8339 2 651.322242 1300.62993 NaN NaN NaN 3.7922 0.0024699 NaN NaN NaN NaN 50.923 0.19308 50.923 50.866 51.059 0 0 0 0 0.0059554 1 28147 61.213 46.201 1 NaN NaN 0 6598800 0 6598800 18074 1452 6808 6972 28298 28298 ISVYYNEATGGK 12 1 0 Unmodified _ISVYYNEATGGK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMU8;B4DMJ5 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.3297 2 651.322242 1300.62993 73949.22 0.61406 0.00039995 0.050766 3.3065E-05 0.66483 0.00043302 651.322175053022 655.329387658352 49.039 1.5265 49.039 48.288 49.814 3.8147E-06 733 118 9 0 0 0 4.7654E-48 4 27760 193.82 142.48 1 1.4356 1.6924 0 665900000 258010000 407890000 18075 1452 6808 6972 28299;28300;28301;28302 28301 ISVYYNEATGGK 12 1 0 Unmodified _ISVYYNEATGGK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMU8;B4DMJ5 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.3294 2 651.322242 1300.62993 73845.06 0.72472 0.00047202 0.12254 7.9814E-05 0.84726 0.00055184 651.322222814641 655.329191510285 58.27 1.0261 58.27 57.808 58.834 -3.8147E-06 572 78 12 0 0 0 0.00026837 2 29467 73.499 47.94 1 1.1688 1.0056 0 90692000 43283000 47409000 18076 1452 6808 6972 28303;28304 28304 ISVYYNEATGGK 12 1 0 Unmodified _ISVYYNEATGGK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;B4DMU8;B4DMJ5 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.3289 2 651.322242 1300.62993 74426.52 0.53504 0.00034849 0.021221 1.3822E-05 0.55626 0.00036231 651.322094617572 655.329179180135 58.752 1.1026 58.752 58.384 59.486 0 579 88 11 0 0 0 0.00018123 2 29151 74.944 53.481 1 1.1923 1.0152 0 85087000 39840000 45247000 18077 1452 6808 6972 28305;28306 28305 ISWVGEAVK 9 1 0 Unmodified _ISWVGEAVK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.7843 2 494.776742 987.538931 86563.06 0.30367 0.00015025 0.061716 3.0536E-05 0.36539 0.00018078 494.776322733976 498.783993254243 70.29 0.56416 70.29 70.06 70.624 0 139 49 5 0 0 0 0.039369 1 40818 42.287 23.909 1 0.41743 0.42498 0 14141000 9558200 4582500 18078 222 6809 6973 28307 28307 ISWVGEAVK 9 1 0 Unmodified _ISWVGEAVK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.7841 2 494.776742 987.538931 NaN NaN NaN 0.56696 0.00028052 NaN NaN NaN NaN 68.938 0.34277 68.938 68.748 69.091 0 0 0 0 0.012937 1 40970 64.42 38.594 1 NaN NaN 0 6849600 0 6849600 18079 222 6809 6973 28308 28308 ISWVGEAVK 9 1 0 Unmodified _ISWVGEAVK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.7842 2 494.776742 987.538931 85885.94 0.15636 7.7362E-05 -0.93471 -0.00046247 -0.77835 -0.00038511 494.776521431956 498.783921616552 80.584 0.39116 80.584 80.353 80.744 0 78 27 4 0 0 0 0.045082 1 42699 40.002 40.002 1 0.97793 0.77366 0 2326300 1155700 1170600 18080 222 6809 6973 28309 28309 ISYSGQFLVK 10 1 0 Unmodified _ISYSGQFLVK_ 0 0 0 Q9NZI8 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.3245 2 571.316232 1140.61791 79377.52 0.81095 0.00046331 0.80982 0.00046266 1.6208 0.00092597 571.315906813071 575.324273616069 77.606 0.58353 77.606 77.374 77.958 0 150 36 6 0 0 0 0.0034605 1 46864 64.42 23.193 1 2.0267 2.1301 0 34953000 12527000 22426000 18081 2087 6810 6974 28310 28310 ISYVQDENRDPIR 13 0 2 Unmodified _ISYVQDENRDPIR_ 0 0 1 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.6063 3 535.605754 1603.79543 83105.95 0.59511 0.00031874 0.079702 4.2689E-05 0.67481 0.00036143 535.605841908773 542.277875839508 43.47 0.75526 43.47 43.082 43.838 3.8147E-06 395 63 9 0 0 0 3.0992E-06 2 23164 94.122 87.083 1 0.88056 0.96006 0 119980000 65135000 54843000 18082 2059 6811 6975 28311;28312 28312 ISYVQDENRDPIR 13 0 2 Unmodified _ISYVQDENRDPIR_ 0 0 1 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.6054 3 535.605754 1603.79543 83037.98 0.72802 0.00038993 -0.17207 -9.2164E-05 0.55594 0.00029777 535.605718724328 542.277729051627 42.287 0.63061 42.287 42.039 42.67 0 350 54 9 0 0 0 2.6126E-09 2 22727 105.65 96.602 1 0.8063 0.96347 0 256320000 138570000 117750000 18083 2059 6811 6975 28313;28314 28313 ISYVQDENRDPIR 13 0 2 Unmodified _ISYVQDENRDPIR_ 0 0 1 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.4155 2 802.904993 1603.79543 67504.68 0.80951 0.00064996 0.009979 8.0122E-06 0.81949 0.00065797 802.904702081212 812.913709237668 42.286 0.44921 42.286 42.11 42.559 0 155 37 6 0 0 0 0.03568 1 22710 50.791 50.791 1 0.96018 1.1142 0 81750000 40782000 40968000 18084 2059 6811 6975 28315 28315 ISYVQDENRDPIR 13 0 2 Unmodified _ISYVQDENRDPIR_ 0 0 1 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.6067 3 535.605754 1603.79543 81205.73 0.40996 0.00021958 0.045742 2.45E-05 0.4557 0.00024408 535.605895341004 542.277896085675 50.683 0.87864 50.683 50.387 51.266 3.8147E-06 382 60 10 0 0 0 0.0046882 2 24761 33.685 28.406 1 1.6353 1.3201 0 56841000 20127000 36714000 18085 2059 6811 6975 28316;28317 28316 ISYVQDENRDPIR 13 0 2 Unmodified _ISYVQDENRDPIR_ 0 0 1 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.2784 3 535.605754 1603.79543 82073.18 0.27923 0.00014956 -0.11431 -6.1227E-05 0.16492 8.833E-05 535.605750566081 542.277863108871 51.089 1.0725 51.089 50.746 51.819 0 401 70 11 0 0 0 0.0011607 2 24429 53.448 53.448 1 1.6503 1.5441 0 42082000 15931000 26151000 18086 2059 6811 6975 28318;28319 28318 ITALDEFATK 10 1 0 Unmodified _ITALDEFATK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.7979 2 554.797872 1107.58119 81641.67 0.39431 0.00021876 0.19534 0.00010837 0.58965 0.00032714 554.797863990633 558.805210543179 77.294 0.7681 77.294 76.854 77.622 0 180 65 4 0 0 0 0.035186 1 45612 40.715 13.386 1 2.1972 2.215 0 10029000 3031600 6997600 18087 523 6812 6976 28320 28320 ITAQENDMEVELPAAANSR 19 0 1 Oxidation (M) _ITAQENDM(ox)EVELPAAANSR_ ITAQENDM(1)EVELPAAANSR ITAQENDM(108.63)EVELPAAANSR 0 1 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1043.4948 2 1037.98913 2073.9637 59712.89 0.13876 0.00014403 0.048307 5.0142E-05 0.18707 0.00019418 1038.49064875638 1042.99337013368 66.468 0.67171 66.468 66.175 66.847 0 257 53 7 0 0 0 1.3611E-12 3 38446 108.63 108.63 1 0.90717 0.9438 0 21040000 11015000 10025000 18088 626 6813 6977 28321;28322;28323 28323 483 ITAQENDMEVELPAAANSR 19 0 1 Oxidation (M) _ITAQENDM(ox)EVELPAAANSR_ ITAQENDM(1)EVELPAAANSR ITAQENDM(72.9)EVELPAAANSR 0 1 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1042.9946 2 1037.98913 2073.9637 60062.93 0.40942 0.00042497 -0.014288 -1.483E-05 0.39513 0.00041014 1038.49071795521 1042.99315622764 65.545 0.76612 65.545 65.171 65.938 0 299 63 7 0 0 0 5.0839E-06 3 38472 72.898 72.898 1 1.0679 1.1016 0 21502000 9003500 12498000 18089 626 6813 6977 28324;28325;28326 28324 483 ITAQQITTPGAQQK 14 1 0 Unmodified _ITAQQITTPGAQQK_ 0 0 0 Q96L91;A0A0A0MR70 Q96L91 Q96L91 EP400 E1A-binding protein p400 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.9167 2 742.907005 1483.79946 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.56 1 41.56 41.06 42.06 0 0 0 0 0.014388 1 22340 47.971 27.668 1 18090 1977 6814 6978 28327 28327 ITASLEIR 8 0 1 Unmodified _ITASLEIR_ 0 0 0 Q2TB10;B7Z4V7 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.7689 2 451.768917 901.523281 NaN NaN NaN 0.3555 0.0001606 NaN NaN NaN NaN 70.907 0.30441 70.907 70.736 71.04 0 0 0 0 0.036137 1 42422 55.504 14.002 1 NaN NaN 0 3153400 3153400 0 18091 1777 6815 6979 28328 28328 ITCLCQVPQNAANR 14 0 1 Unmodified _ITCLCQVPQNAANR_ 0 0 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.9055 2 822.900873 1643.78719 NaN NaN NaN -0.040349 -3.3203E-05 NaN NaN NaN NaN 50.323 0.40074 50.323 50.068 50.469 0 0 0 0 1.0883E-06 2 27738 103.31 91.149 1 NaN NaN 0 5862500 0 5862500 18092 1583 6816 6980 28329;28330 28330 ITCLCQVPQNAANR 14 0 1 Unmodified _ITCLCQVPQNAANR_ 0 0 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.8666 2 822.900873 1643.78719 NaN NaN NaN 0.84808 0.00069788 NaN NaN NaN NaN 49.148 0.31873 49.148 48.99 49.308 3.8147E-06 0 0 0 0.021642 1 27542 44.203 30.045 1 NaN NaN 0 10083000 0 10083000 18093 1583 6816 6980 28331 28331 ITDAYLDQYLWYEADK 16 1 0 Unmodified _ITDAYLDQYLWYEADK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1003.9677 2 1003.97274 2005.93092 NaN NaN NaN 0.22701 0.00022791 NaN NaN NaN NaN 116.49 0.3845 116.49 116.26 116.64 7.6294E-06 0 0 0 0.014758 1 74279 42.789 29.588 1 NaN NaN 0 7606800 7606800 0 18094 1854 6817 6981 28332 28332 ITDAYLDQYLWYEADK 16 1 0 Unmodified _ITDAYLDQYLWYEADK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1003.9737 2 1003.97274 2005.93092 NaN NaN NaN -0.24307 -0.00024404 NaN NaN NaN NaN 115.94 0.60521 115.94 115.68 116.29 -7.6294E-06 0 0 0 3.3515E-06 1 75683 82.543 74.238 1 NaN NaN 0 7175500 7175500 0 18095 1854 6817 6981 28333 28333 ITDAYLDQYLWYEADK 16 1 0 Unmodified _ITDAYLDQYLWYEADK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1004.4734 2 1003.97274 2005.93092 61381.77 0.70733 0.00071014 -0.77463 -0.00077771 -0.067303 -6.7571E-05 1004.47358083518 1008.48013252326 128.05 0.49426 128.05 127.83 128.33 0 79 19 7 0 0 0 0.025276 1 77298 26.112 26.112 1 0.82971 0.64981 0 3205000 1821600 1383400 18096 1854 6817 6981 28334 28334 ITDEEELNDYK 11 1 0 Unmodified _ITDEEELNDYK_ 0 0 0 Q69YP1;Q5JY65;Q9BZJ0;Q8IXG0 Q69YP1 Q69YP1 DKFZp762M013;CRNKL1;crn Crooked neck-like protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.8193 2 684.811904 1367.60926 NaN NaN NaN -0.26273 -0.00017992 NaN NaN NaN NaN 45.893 0.23132 45.893 45.727 45.959 0 0 0 0 0.0013184 1 24718 84.17 56.428 1 NaN NaN 0 3769700 0 3769700 18097 1810 6818 6982 28335 28335 ITDFGLAK 8 1 0 Unmodified _ITDFGLAK_ 0 0 0 Q59FL8;Q504U8;E7BSV0;E9PFD7;F2YGG7;Q2TTR7;A9CB80;A8K2T7;P00533;B7Z2I3;A0A068JD88;I3WA73;I3WA72;I3WA68;Q75MF2 Q59FL8 Q59FL8 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.7524 2 432.744911 863.475269 102595.4 0.27292 0.0001181 0.080654 3.4903E-05 0.35357 0.00015301 432.744728238321 436.751961132725 59.102 0.35487 59.102 58.848 59.203 3.8147E-06 67 32 4 0 0 0 0.027047 1 34336 54.157 21.687 1 2.0988 2.1173 0 7874500 2925500 4948900 18098 713 6819 6983 28336 28336 ITDGLHALQEASNK 14 1 0 Unmodified _ITDGLHALQEASNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.8966 2 748.888812 1495.76307 70162.08 0.42528 0.00031849 0.019361 1.45E-05 0.44465 0.00033299 748.88871137633 752.895929631993 50.318 1.0357 50.318 49.809 50.844 0 436 97 6 0 0 0 3.5135E-22 3 27496 149.96 135.51 1 0.78054 0.88198 0 82847000 47314000 35533000 18099 69 6820 6984 28337;28338;28339 28337 ITDGLHALQEASNK 14 1 0 Unmodified _ITDGLHALQEASNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.2656 3 499.594967 1495.76307 85280.11 0.15325 7.6564E-05 0.01547 7.7287E-06 0.16872 8.4292E-05 499.594908165959 502.266328297987 50.387 1.0864 50.387 49.685 50.771 0 253 99 5 0 0 0 0.0056801 2 27587 26.365 18.997 1 0.85874 0.96762 0 115020000 60551000 54467000 18100 69 6820 6984 28340;28341 28341 ITDGLHALQEASNK 14 1 0 Unmodified _ITDGLHALQEASNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.8975 2 748.888812 1495.76307 70585.8 0.54051 0.00040478 0.060422 4.525E-05 0.60093 0.00045003 748.888724273413 752.895973818288 48.815 0.90106 48.815 48.326 49.227 0 391 69 8 0 0 0 0.0034878 1 27066 47.062 47.062 1 0.77059 0.88861 0 185510000 106600000 78911000 18101 69 6820 6984 28342 28342 ITDGLHALQEASNK 14 1 0 Unmodified _ITDGLHALQEASNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.2662 3 499.594967 1495.76307 84938.93 0.14688 7.3379E-05 0.25109 0.00012544 0.39796 0.00019882 499.595095444862 502.266393901427 48.84 0.95097 48.84 48.226 49.177 3.8147E-06 408 73 8 0 0 0 7.2529E-05 2 27288 46.68 25.409 1 0.82641 0.95866 0 219960000 120600000 99362000 18102 69 6820 6984 28343;28344 28344 ITDGLHALQEASNK 14 1 0 Unmodified _ITDGLHALQEASNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.8879 2 748.888812 1495.76307 70021.24 0.76986 0.00057654 -0.45787 -0.00034289 0.31199 0.00023365 748.888324460971 752.895609309099 57.884 0.71174 57.884 57.628 58.34 0 312 55 9 0 0 0 0.0031868 2 29315 47.57 42.469 1 1.7141 1.3949 0 30736000 10452000 20284000 18103 69 6820 6984 28345;28346 28345 ITDGLHALQEASNK 14 1 0 Unmodified _ITDGLHALQEASNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.5949 3 499.594967 1495.76307 85099.4 0.34084 0.00017028 -0.056083 -2.8019E-05 0.28476 0.00014226 499.594947685103 502.266357283607 57.925 0.6819 57.925 57.658 58.34 -3.8147E-06 314 53 11 0 0 0 0.0080036 2 29341 28.146 17.291 1 1.731 1.3685 0 18210000 6414000 11796000 18104 69 6820 6984 28347;28348 28348 ITDGLHALQEASNK 14 1 0 Unmodified _ITDGLHALQEASNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.8896 2 748.888812 1495.76307 70769.88 0.45521 0.0003409 -0.2679 -0.00020063 0.18731 0.00014027 748.888514843634 752.895757518322 58.336 0.76802 58.336 58.05 58.818 0 333 58 10 0 0 0 0.00066269 2 28915 59.227 51.123 1 1.7292 1.4075 0 25404000 9173300 16231000 18105 69 6820 6984 28349;28350 28350 ITDGLHALQEASNK 14 1 0 Unmodified _ITDGLHALQEASNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 499.5948 3 499.594967 1495.76307 85416.68 0.10193 5.0925E-05 -0.039261 -1.9615E-05 0.06267 3.131E-05 499.594942390682 502.266413021025 58.311 0.78606 58.311 58.019 58.805 0 308 59 9 0 0 0 0.010531 2 28941 29.013 17.952 1 1.7698 1.4219 0 16090000 5443800 10646000 18106 69 6820 6984 28351;28352 28352 ITDVIIGFQACCR 13 0 1 Unmodified _ITDVIIGFQACCR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.8886 2 776.884161 1551.75377 NaN NaN NaN 0.26336 0.0002046 NaN NaN NaN NaN 97.657 0.51889 97.657 97.458 97.977 0 0 0 0 0.0033906 1 59674 65.347 54.823 1 NaN NaN 0 4530900 0 4530900 18107 81 6821 6985 28353 28353 ITDVIIGFQACCR 13 0 1 Unmodified _ITDVIIGFQACCR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.3907 2 776.884161 1551.75377 NaN NaN NaN -0.36039 -0.00027998 NaN NaN NaN NaN 96.991 0.35223 96.991 96.878 97.231 0 0 0 0 0.0021314 1 60505 71.451 64.172 1 NaN NaN 0 4519200 0 4519200 18108 81 6821 6985 28354 28354 ITDVIIGFQACCR 13 0 1 Unmodified _ITDVIIGFQACCR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 781.8891 2 776.884161 1551.75377 NaN NaN NaN -0.19531 -0.00015173 NaN NaN NaN NaN 110.3 0.53119 110.3 110.05 110.58 0 0 0 0 0.0008036 1 62745 79.489 68.731 1 NaN NaN 0 4126900 0 4126900 18109 81 6821 6985 28355 28355 ITEAIGIISK 10 1 0 Unmodified _ITEAIGIISK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.8186 2 522.818607 1043.62266 83964.74 0.38268 0.00020007 -0.10268 -5.3683E-05 0.28 0.00014639 522.818494683099 526.825578727495 74.974 1.6061 74.974 74.301 75.907 0 619 133 8 0 0 0 0.00082113 2 43909 80.688 41.726 1 0.91802 1.0363 0 136330000 69671000 66662000 18110 908 6822 6986 28356;28357 28357 ITEAIGIISK 10 1 0 Unmodified _ITEAIGIISK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.8257 2 522.818607 1043.62266 84429.55 0.25361 0.00013259 0.090283 4.7201E-05 0.34389 0.00017979 522.818684228884 526.825612614568 73.717 1.3774 73.717 73.145 74.523 0 564 115 8 0 0 0 1.6331E-05 2 44234 100.48 58.368 1 0.89945 1.0418 0 210310000 105220000 105100000 18111 908 6822 6986 28358;28359 28358 ITEAIGIISK 10 1 0 Unmodified _ITEAIGIISK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.8259 2 522.818607 1043.62266 85481.72 0.24855 0.00012995 0.11963 6.2547E-05 0.36818 0.00019249 522.818700057606 526.825692387461 85.273 1.6973 85.273 84.906 86.603 0 396 113 8 0 0 0 0.0011335 3 46654 75.652 43.718 1 1.3767 1.0752 0 16112000 7076000 9036300 18112 908 6822 6986 28360;28361;28362 28361 ITEAIGIISK 10 1 0 Unmodified _ITEAIGIISK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.8189 2 522.818607 1043.62266 84574.81 0.39935 0.00020879 0.10082 5.2712E-05 0.50018 0.0002615 522.818651536507 526.825725332569 85.421 1.4027 85.421 84.975 86.378 0 368 83 8 0 0 0 0.01288 1 45769 50.034 23.928 1 1.4054 1.1284 0 17814000 7328000 10486000 18113 908 6822 6986 28363 28363 ITEELNLR 8 0 1 Unmodified _ITEELNLR_ 0 0 0 Q15906;B4DMP5 Q15906 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.277 2 494.277106 986.53966 86753.32 0.06364 3.1456E-05 -0.58813 -0.0002907 -0.52449 -0.00025924 494.276597974233 499.280736889269 56.352 0.53024 56.352 56.104 56.634 -3.8147E-06 138 38 5 0 0 0 0.02313 1 32475 56.721 24.766 1 0.8159 0.81476 0 16795000 9083400 7711400 18114 1767 6823 6987 28364 28364 ITEELNLR 8 0 1 Unmodified _ITEELNLR_ 0 0 0 Q15906;B4DMP5 Q15906 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.2813 2 494.277106 986.53966 NaN NaN NaN 0.13532 6.6884E-05 NaN NaN NaN NaN 66.599 0.46594 66.599 66.377 66.843 0 0 0 0 0.041784 1 34568 53.166 17.286 1 NaN NaN 0 1123000 0 1123000 18115 1767 6823 6987 28365 28365 ITEQLIEAINNGDFEAYTK 19 1 0 Unmodified _ITEQLIEAINNGDFEAYTK_ 0 0 0 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;H0Y6G2;Q8WU40;B3KY86;Q13280;Q59FI6 Q5SWX3 Q5SWX3 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1089.548 2 1085.03914 2168.06373 61503.94 0.24193 0.0002625 -0.19741 -0.00021419 0.044522 4.8308E-05 1085.03971072742 1089.54702227267 116.06 0.38993 116.06 115.8 116.19 0 43 21 4 0 0 0 0.0077362 1 73894 28.812 21.931 1 1.0752 1.0748 0 7749500 3507400 4242100 18116 475 6824 6988 28366 28366 ITESEEVVSR 10 0 1 Unmodified _ITESEEVVSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.7971 2 574.793318 1147.57208 79195.24 0.54246 0.0003118 -0.62053 -0.00035668 -0.078073 -4.4876E-05 574.792977479106 579.797411595334 29.097 0.73368 29.097 28.866 29.6 0 235 49 10 0 0 0 2.9202E-22 2 13976 166.33 111.78 1 1.2831 1.5192 0 382180000 167870000 214310000 18117 1440 6825 6989 28367;28368 28367 ITESEEVVSR 10 0 1 Unmodified _ITESEEVVSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.797 2 574.793318 1147.57208 78778.28 0.50744 0.00029167 -0.47574 -0.00027345 0.031703 1.8223E-05 574.793342465972 579.797547776666 28.565 0.98065 28.565 28.172 29.153 -1.9073E-06 443 78 8 0 0 0 6.531E-08 2 13561 112.75 99.395 1 1.395 1.5868 0 117210000 53879000 63330000 18118 1440 6825 6989 28369;28370 28369 ITFHGEGDQEPGLEPGDIIIVLDQK 25 1 0 Unmodified _ITFHGEGDQEPGLEPGDIIIVLDQK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.799 3 907.464102 2719.37048 63828.79 0.81956 0.00074372 0.030945 2.8082E-05 0.8505 0.0007718 907.798429817854 910.47020357568 120.58 0.64298 120.58 120.25 120.9 0 367 45 11 0 0 0 7.261E-14 2 77726 84.68 84.68 1 1.1464 1.2327 0 38813000 18636000 20176000 18119 1535 6826 6990 28371;28372 28372 ITFHGEGDQEPGLEPGDIIIVLDQK 25 1 0 Unmodified _ITFHGEGDQEPGLEPGDIIIVLDQK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 907.7991 3 907.464102 2719.37048 63519.99 0.91754 0.00083263 0.055649 5.05E-05 0.97319 0.00088313 907.798476559045 910.469950261817 119.99 0.68672 119.99 119.65 120.34 -7.6294E-06 380 49 11 0 0 0 8.0761E-10 1 79202 58.812 58.812 1 1.1251 1.2688 0 66911000 31257000 35654000 18120 1535 6826 6990 28373 28373 ITFHGEGDQEPGLEPGDIIIVLDQK 25 1 0 Unmodified _ITFHGEGDQEPGLEPGDIIIVLDQK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 907.7982 3 907.464102 2719.37048 63216.55 1.0381 0.00094206 -0.26338 -0.000239 0.77475 0.00070305 907.798199827542 910.469784889019 132.76 0.62589 132.76 132.49 133.12 0 189 28 12 0 0 0 1.8489E-10 2 80733 61.417 61.417 1 0.75384 0.61719 0 35394000 20272000 15121000 18121 1535 6826 6990 28374;28375 28375 ITFHGEGDQEPGLEPGDIIIVLDQK 25 1 0 Unmodified _ITFHGEGDQEPGLEPGDIIIVLDQK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 907.8003 3 907.464102 2719.37048 63908.44 0.99132 0.00089959 -0.36393 -0.00033025 0.6274 0.00056934 907.798133694487 910.469828151769 132.49 0.55521 132.49 132.27 132.83 0 173 22 12 0 0 0 0.0010355 1 79596 24.975 24.975 1 0.80509 0.64662 0 22284000 12615000 9668700 18122 1535 6826 6990 28376 28376 ITFLLQAIR 9 0 1 Unmodified _ITFLLQAIR_ 0 0 0 A0A024RDY0;H0Y8C6;O00410;C9JMV5;E7ETV3;B4E0R6;C9JZD8;C9J875;C9JQT6;E7ESA1;E7ESZ1;E7EWK4;E7EX05;E7EQT5;E7ETV8;E7EV12 A0A024RDY0 A0A024RDY0 RANBP5;IPO5 Importin-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.8416 2 537.837134 1073.65972 87299.75 0.77244 0.00041545 0.15969 8.5887E-05 0.93213 0.00050133 538.338441008259 542.841239597541 113.02 0.48496 113.02 112.81 113.3 0 67 34 4 0 0 0 0.0024681 1 71518 74.255 52.295 1 2.3769 2.5239 0 3773300 1429800 2343400 18123 394 6827 6991 28377 28377 ITFLLQAIR 9 0 1 Unmodified _ITFLLQAIR_ 0 0 0 A0A024RDY0;H0Y8C6;O00410;C9JMV5;E7ETV3;B4E0R6;C9JZD8;C9J875;C9JQT6;E7ESA1;E7ESZ1;E7EWK4;E7EX05;E7EQT5;E7ETV8;E7EV12 A0A024RDY0 A0A024RDY0 RANBP5;IPO5 Importin-5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.837 2 537.837134 1073.65972 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.15 1 113.15 112.65 113.65 7.6294E-06 0 0 0 0.014896 1 71586 58.917 26.562 1 18124 394 6827 6991 28378 28378 ITFLLQAIR 9 0 1 Unmodified _ITFLLQAIR_ 0 0 0 A0A024RDY0;H0Y8C6;O00410;C9JMV5;E7ETV3;B4E0R6;C9JZD8;C9J875;C9JQT6;E7ESA1;E7ESZ1;E7EWK4;E7EX05;E7EQT5;E7ETV8;E7EV12 A0A024RDY0 A0A024RDY0 RANBP5;IPO5 Importin-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.842 2 537.837134 1073.65972 85686.67 0.70897 0.00038131 0.05199 2.7962E-05 0.76096 0.00040927 537.836738090518 542.841253143962 112.36 0.36677 112.36 112.17 112.54 0 77 27 4 0 0 0 0.00063538 1 72682 96.492 65.263 1 1.6358 1.6711 0 5147700 2012000 3135700 18125 394 6827 6991 28379 28379 ITFPHR 6 0 1 Unmodified _ITFPHR_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;A0A0J9YWK2 Q969X6 Q969X6 CIRH1A Cirhin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 385.719 2 385.71903 769.423508 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.512 1 28.512 28.012 29.012 0 0 0 0 0.030609 1 13651 84.185 45.036 1 18126 1955 6828 6992 28380 28380 ITGEAFVQFASQELAEK 17 1 0 Unmodified _ITGEAFVQFASQELAEK_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 938.4833 2 934.475448 1866.93634 NaN NaN NaN 0.32133 0.00030027 NaN NaN NaN NaN 118.27 0.73924 118.27 117.96 118.7 7.6294E-06 0 0 0 1.2062E-74 2 77696 192.14 171.94 1 NaN NaN 0 93657000 0 93657000 18127 234 6829 6993 28381;28382 28381 ITGEAFVQFASQELAEK 17 1 0 Unmodified _ITGEAFVQFASQELAEK_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 934.976 2 934.475448 1866.93634 NaN NaN NaN -1.2814 -0.0011975 NaN NaN NaN NaN 118.25 0.77625 118.25 117.96 118.74 0 0 0 0 8.3253E-07 1 77721 112.44 97.561 1 NaN NaN 0 49125000 49125000 0 18128 234 6829 6993 28383 28383 ITGEAFVQFASQELAEK 17 1 0 Unmodified _ITGEAFVQFASQELAEK_ 0 0 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 938.9851 2 934.475448 1866.93634 61459.31 0.66644 0.00062278 -0.12957 -0.00012108 0.53687 0.00050169 934.976485281068 938.483728824249 131.47 1.1809 131.47 130.77 131.95 0 232 53 9 0 0 0 1.2344E-09 2 79780 110.51 110.51 1 1.1075 0.89935 0 27551000 13207000 14343000 18129 234 6829 6993 28384;28385 28385 ITGIEPLPGENK 12 1 0 Unmodified _ITGIEPLPGENK_ 0 0 0 B7Z947;Q8N397;H7BY83;Q5JSH3 B7Z947 B7Z947 WDR44;DKFZp761M142 WD repeat-containing protein 44 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.3566 2 634.34826 1266.68197 NaN NaN NaN 0.92828 0.00058885 NaN NaN NaN NaN 68.716 0.23671 68.716 68.576 68.812 0 0 0 0 0.0064581 1 39790 60.298 35.522 1 NaN NaN 0 3626300 0 3626300 18130 1106 6830 6994 28386 28386 ITGMLLEIDNSELLHMLESPESLR 24 0 1 2 Oxidation (M) _ITGM(ox)LLEIDNSELLHM(ox)LESPESLR_ ITGM(1)LLEIDNSELLHM(1)LESPESLR ITGM(50.78)LLEIDNSELLHM(50.78)LESPESLR 0 2 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;H0YAS7;H0YAS6;H0YB75;H0YER0;H0Y6X6;B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q53GL4;Q59GZ7 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.4699 3 924.797987 2771.37213 61969.18 0.8136 0.00075242 -0.51302 -0.00047444 0.30058 0.00027798 925.466980631538 928.468076200702 122.65 0.88357 122.65 122.14 123.02 0 250 68 8 0 0 0 6.3716E-07 1 81191 50.783 50.783 1 6.3156 6.6024 0 22581000 2616000 19964000 18131 273;818 6831 6995 28387 28387 207;208 ITGNPVVTNR 10 0 1 Unmodified _ITGNPVVTNR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;Q9H8T8 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.8053 2 535.80128 1069.58801 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.404 1 29.404 28.904 29.904 0 0 0 0 2.291E-05 1 14234 93.111 61.581 1 18132 1102 6832 6996 28388 28388 ITGNPVVTNR 10 0 1 Unmodified _ITGNPVVTNR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;Q9H8T8 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.3017 2 535.80128 1069.58801 NaN NaN NaN -1.0824 -0.00057996 NaN NaN NaN NaN 29.024 0.1497 29.024 28.899 29.049 0 0 0 0 0.015084 1 13884 58.083 29.909 1 NaN NaN 0 3455700 3455700 0 18133 1102 6832 6996 28389 28389 ITHCPTLLTR 10 0 1 Unmodified _ITHCPTLLTR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 407.8929 3 404.557019 1210.64923 93915.34 -0.17348 -7.0181E-05 -0.22797 -9.2227E-05 -0.40145 -0.00016241 404.557101015052 407.893148173153 37.655 0.3376 37.655 37.47 37.807 0 116 25 6 0 0 0 0.0026107 1 19621 45.661 40.177 1 0.88747 0.97066 0 30608000 20046000 10563000 18134 684 6833 6997 28390 28390 ITHQIVDRPGQQTSVIGR 18 0 2 Unmodified _ITHQIVDRPGQQTSVIGR_ 0 0 1 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.045 3 669.0361 2004.08647 74072.23 0.68173 0.0004561 0.10955 7.3292E-05 0.79128 0.00052939 669.370371513298 675.708201303964 40.329 0.56966 40.329 40.061 40.631 0 166 49 5 0 0 0 0.0012022 2 20927 35.64 35.64 1 1.079 1.1724 0 37980000 16322000 21659000 18135 886 6834 6998 28391;28392 28391 ITHQIVDRPGQQTSVIGR 18 0 2 Unmodified _ITHQIVDRPGQQTSVIGR_ 0 0 1 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.3712 3 669.0361 2004.08647 74060.7 0.34417 0.00023026 0.18011 0.0001205 0.52428 0.00035076 669.036354750515 676.042639608667 37.673 0.51852 37.673 37.481 38 0 187 39 7 0 0 0 0.00024612 2 19545 43.955 43.955 1 0.94774 1.0933 0 64843000 28689000 36154000 18136 886 6834 6998 28393;28394 28394 ITHQIVDRPGQQTSVIGR 18 0 2 Unmodified _ITHQIVDRPGQQTSVIGR_ 0 0 1 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.7043 3 669.0361 2004.08647 NaN NaN NaN -0.28601 -0.00019135 NaN NaN NaN NaN 37.834 0.20315 37.834 37.781 37.985 0 0 0 0 0.010335 1 19808 41.348 32.639 1 NaN NaN 0 20488000 20488000 0 18137 886 6834 6998 28395 28395 ITHQIVDRPGQQTSVIGR 18 0 2 Unmodified _ITHQIVDRPGQQTSVIGR_ 0 0 1 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.758 4 502.028894 2004.08647 84258.51 0.050431 2.5318E-05 -0.13143 -6.598E-05 -0.080996 -4.0662E-05 502.279719714178 507.032929266189 37.69 0.58409 37.69 37.448 38.032 0 295 44 9 0 0 0 0.043631 1 19595 12.666 12.666 1 0.99569 1.1613 0 99650000 50767000 48883000 18138 886 6834 6998 28396 28396 ITHQIVDRPGQQTSVIGR 18 0 2 Unmodified _ITHQIVDRPGQQTSVIGR_ 0 0 1 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.0358 3 669.0361 2004.08647 73848.1 0.53696 0.00035925 -0.22753 -0.00015223 0.30943 0.00020702 669.036011798033 675.708191135092 45.064 0.59565 45.064 44.84 45.435 0 233 44 9 0 0 0 0.0034655 2 21465 31.462 31.462 1 1.2591 1.0787 0 5794500 2589900 3204600 18139 886 6834 6998 28397;28398 28398 ITHQIVDRPGQQTSVIGR 18 0 2 Unmodified _ITHQIVDRPGQQTSVIGR_ 0 0 1 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.3726 3 669.0361 2004.08647 73785.77 0.81689 0.00054653 -0.084397 -5.6465E-05 0.73249 0.00049006 669.371106060713 676.042268835857 44.791 0.57019 44.791 44.569 45.139 0 227 42 8 0 0 0 0.0030896 2 20743 32.156 32.156 1 1.1612 1.0538 0 5768300 2619400 3148800 18140 886 6834 6998 28399;28400 28400 ITIAAYLPLK 10 1 0 Unmodified _ITIAAYLPLK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.8541 2 551.847167 1101.67978 83935.75 0.84241 0.00046488 -0.27062 -0.00014934 0.57179 0.00031554 551.846983219741 555.853898785433 113.92 0.53056 113.92 113.71 114.24 -7.6294E-06 135 38 4 0 0 0 0.0020368 3 72324 70.919 62.546 1 0.74259 0.74342 0 7672200 4600300 3071900 18141 1937 6835 6999 28401;28402;28403 28403 ITIAAYLPLK 10 1 0 Unmodified _ITIAAYLPLK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.8472 2 551.847167 1101.67978 83745.07 0.5821 0.00032123 -0.12878 -7.1066E-05 0.45333 0.00025017 551.847049876479 555.853920448383 113.22 0.52055 113.22 113.06 113.58 0 102 36 4 0 0 0 0.0002277 2 73390 93.162 84.25 1 0.68051 0.68557 0 7307800 4040100 3267800 18142 1937 6835 6999 28404;28405 28404 ITIAAYLPLK 10 1 0 Unmodified _ITIAAYLPLK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.8478 2 551.847167 1101.67978 83885.75 0.63803 0.00035209 0.16713 9.223E-05 0.80516 0.00044432 551.847191422287 555.854284294783 125.57 0.38187 125.57 125.38 125.76 0 37 14 4 0 0 0 0.027594 1 75368 43.769 42.281 1 0.6695 0.55293 0 2339100 1314900 1024200 18143 1937 6835 6999 28406 28406 ITIAAYLPLK 10 1 0 Unmodified _ITIAAYLPLK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.8475 2 551.847167 1101.67978 84786.38 0.73509 0.00040566 -0.057734 -3.186E-05 0.67736 0.0003738 551.846995595957 555.854002190818 125.39 0.36575 125.39 125.13 125.49 0 40 14 4 0 0 0 0.016374 1 74304 48.283 45.027 1 0.75752 0.64336 0 1448400 814630 633780 18144 1937 6835 6999 28407 28407 ITIGQAPTEK 10 1 0 Unmodified _ITIGQAPTEK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.3047 2 529.298039 1056.58152 77700.11 0.30296 0.00016036 -0.9475 -0.00050151 -0.64454 -0.00034115 529.298159339677 533.304899697598 40.103 0.40552 40.103 39.869 40.274 0 136 32 6 0 0 0 0.011229 1 20971 52.278 37.638 1 2.3613 2.5503 0 36866000 11139000 25727000 18145 196 6836 7000 28408 28408 ITIGQAPTEK 10 1 0 Unmodified _ITIGQAPTEK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.3051 2 529.298039 1056.58152 78263.55 0.41982 0.00022221 -0.90208 -0.00047747 -0.48226 -0.00025526 529.298179707027 533.304927311136 39.108 0.3232 39.108 38.908 39.231 0 124 26 6 0 0 0 2.8454E-09 1 20616 125.83 93.988 1 1.9325 2.1446 0 48666000 14900000 33765000 18146 196 6836 7000 28409 28409 ITIGQAPTEK 10 1 0 Unmodified _ITIGQAPTEK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.3051 2 529.298039 1056.58152 81195.08 0.28141 0.00014895 -0.57506 -0.00030438 -0.29365 -0.00015543 529.297737745176 533.305668160554 45.746 0.45014 45.746 45.515 45.966 0 107 34 4 0 0 0 0.037902 1 21891 39.622 33.172 1 1.1605 0.97 0 1664300 928020 736310 18147 196 6836 7000 28410 28410 ITISPLQELTLYNPER 16 0 1 Unmodified _ITISPLQELTLYNPER_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 949.0201 2 944.014741 1886.01493 62626.41 0.94134 0.00088864 0.69347 0.00065465 1.6348 0.0015433 944.515531570777 949.520621099488 123.08 0.54212 123.08 122.82 123.37 7.6294E-06 248 42 10 0 0 0 7.6391E-05 3 79673 81.431 81.431 1 1.6981 1.7231 0 27948000 9649000 18299000 18148 1364 6837 7001 28411;28412;28413 28411 ITISPLQELTLYNPER 16 0 1 Unmodified _ITISPLQELTLYNPER_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.019 2 944.014741 1886.01493 63119.5 0.86071 0.00081252 0.024379 2.3014E-05 0.88509 0.00083553 944.014395720838 949.018846627403 122.63 0.42918 122.63 122.41 122.84 0 197 35 8 0 0 0 2.288E-09 4 81261 111.39 111.39 1 1.6049 1.755 0 35084000 13422000 21662000 18149 1364 6837 7001 28414;28415;28416;28417 28415 ITLDNAYMEK 10 1 0 Oxidation (M) _ITLDNAYM(ox)EK_ ITLDNAYM(1)EK ITLDNAYM(79.99)EK 0 1 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.2996 2 607.292096 1212.56964 78123.52 0.68749 0.00041751 -0.10045 -6.1005E-05 0.58704 0.0003565 607.292454335261 611.299108056333 49.313 0.72542 49.313 48.904 49.629 0 200 51 6 0 0 0 0.00041894 1 26949 79.986 65.848 1 3.6459 4.0449 0 59206000 14351000 44855000 18150 1481 6838 7002 28418 28418 1238 ITLDNAYMEK 10 1 0 Oxidation (M) _ITLDNAYM(ox)EK_ ITLDNAYM(1)EK ITLDNAYM(122.33)EK 0 1 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.2991 2 607.292096 1212.56964 79631.13 0.36548 0.00022195 0.061509 3.7354E-05 0.42699 0.00025931 607.292517631471 611.299157329913 47.95 0.67232 47.95 47.718 48.391 0 161 47 6 0 0 0 8.6125E-09 2 26675 122.33 102.33 1 3.5671 3.6627 0 32129000 6738400 25391000 18151 1481 6838 7002 28419;28420 28420 1238 ITLETDEDMVTEIR 14 0 1 Oxidation (M) _ITLETDEDM(ox)VTEIR_ ITLETDEDM(1)VTEIR ITLETDEDM(99.22)VTEIR 0 1 0 A8K6V3;Q15393 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.9083 2 840.903467 1679.79238 67297.44 0.52042 0.00043762 0.51141 0.00043005 1.0318 0.00086767 841.405566931241 845.907583991354 81.606 0.48846 81.606 81.358 81.847 0 127 42 5 0 0 0 4.7473E-06 1 48613 99.215 99.215 1 1.4108 1.4087 0 16612000 6476300 10135000 18152 764 6839 7003 28421 28421 588 ITLETDEDMVTEIR 14 0 1 Oxidation (M) _ITLETDEDM(ox)VTEIR_ ITLETDEDM(1)VTEIR ITLETDEDM(159.94)VTEIR 0 1 0 A8K6V3;Q15393 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.9083 2 840.903467 1679.79238 NaN NaN NaN -0.27918 -0.00023476 NaN NaN NaN NaN 80.76 0.53307 80.76 80.491 81.024 0 0 0 0 1.4517E-42 1 49181 159.94 124.71 1 NaN NaN 0 8509500 0 8509500 18153 764 6839 7003 28422 28422 588 ITLSSSSEEYQK 12 1 0 Unmodified _ITLSSSSEEYQK_ 0 0 0 A4D1T0;Q9H0J9 A4D1T0 A4D1T0 ZC3HDC1;PARP12 Poly [ADP-ribose] polymerase 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.3354 2 686.335546 1370.65654 75487.53 0.33096 0.00022715 0.13982 9.5962E-05 0.47078 0.00032311 686.335799414585 690.342106607397 39.688 0.29254 39.688 39.618 39.91 0 73 24 6 0 0 0 0.00068455 1 20642 67.334 57.553 1 0.96166 0.96065 0 9738400 5281900 4456500 18154 665 6840 7004 28423 28423 ITMIAEPLEK 10 1 0 Oxidation (M) _ITM(ox)IAEPLEK_ ITM(1)IAEPLEK ITM(61.65)IAEPLEK 0 1 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2;K7EP67 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.8164 2 580.815207 1159.61586 79539.1 0.4115 0.00023901 0.2787 0.00016188 0.6902 0.00040088 580.815248105368 584.822378314433 59.103 0.67082 59.103 58.735 59.406 0 206 53 6 0 0 0 0.0021014 1 33635 61.65 12.232 1 1.2632 1.2448 0 19544000 8860400 10683000 18155 794 6841 7005 28424 28424 637 ITMIAEPLEK 10 1 0 Oxidation (M) _ITM(ox)IAEPLEK_ ITM(1)IAEPLEK ITM(66.27)IAEPLEK 0 1 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2;K7EP67 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.8159 2 580.815207 1159.61586 79953.77 0.62195 0.00036124 -0.23956 -0.00013914 0.38239 0.0002221 580.815235594337 584.822028557093 57.496 0.62027 57.496 57.213 57.833 3.8147E-06 189 50 6 0 0 0 0.0014799 2 33378 66.273 27.498 1 1.2941 1.3712 0 20326000 10495000 9831000 18156 794 6841 7005 28425;28426 28426 637 ITNDFYPEEDGK 12 1 0 Unmodified _ITNDFYPEEDGK_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q86UM1;C9JZG1 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.3272 2 714.319896 1426.62524 71831.7 1.001 0.00071506 -0.011762 -8.4017E-06 0.98927 0.00070666 714.319827815505 718.326903439106 54.617 0.35096 54.617 54.39 54.741 0 101 28 5 0 0 0 2.5406E-05 3 31178 100.88 96.724 1 1.6552 1.6846 0 16918000 6694700 10223000 18157 241 6842 7006 28427;28428;28429 28427 ITNDFYPEEDGK 12 1 0 Unmodified _ITNDFYPEEDGK_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q86UM1;C9JZG1 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.8239 2 714.319896 1426.62524 71631.66 0.41902 0.00029931 0.68373 0.0004884 1.1027 0.00078772 714.32075480987 718.829169950779 65.117 0.38026 65.117 64.893 65.274 0 97 28 6 0 0 0 0.014555 1 32820 43.512 42.397 1 0.82728 0.71004 0 1403500 764500 639040 18158 241 6842 7006 28430 28430 ITNEQEETYSLSQSSGK 17 1 0 Unmodified _ITNEQEETYSLSQSSGK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 950.943 2 950.942167 1899.86978 64555.56 0.6682 0.00063542 -0.60981 -0.0005799 0.058387 5.5522E-05 951.443394373706 954.948848302684 41.791 0.39968 41.791 41.61 42.01 3.8147E-06 141 31 7 0 0 0 1.527E-12 2 22038 115.8 108.26 1 1.084 1.1252 0 11361000 4885900 6475600 18159 1795 6843 7007 28431;28432 28432 ITNEQEETYSLSQSSGK 17 1 0 Unmodified _ITNEQEETYSLSQSSGK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 954.9501 2 950.942167 1899.86978 63011.52 0.73926 0.000703 -0.85083 -0.00080909 -0.11156 -0.00010609 951.443762014724 955.449280816847 41.01 0.33157 41.01 40.856 41.187 0 88 26 6 0 0 0 7.0601E-09 3 22059 100.22 94.838 1 1.037 1.0532 0 9127900 4295800 4832100 18160 1795 6843 7007 28433;28434;28435 28434 ITNLTQQLEQASIVK 15 1 0 Unmodified _ITNLTQQLEQASIVK_ 0 0 0 P15924 P15924 P15924 DSP Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.4764 2 843.475251 1684.93595 NaN NaN NaN 0.030905 2.6067E-05 NaN NaN NaN NaN 101.26 0.54582 101.26 101.02 101.56 0 0 0 0 7.6219E-16 1 62186 124.48 107.54 1 NaN NaN 0 9664000 9664000 0 18161 1486 6844 7008 28436 28436 ITNLTQQLEQASIVK 15 1 0 Unmodified _ITNLTQQLEQASIVK_ 0 0 0 P15924 P15924 P15924 DSP Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.4827 2 843.475251 1684.93595 68839 0.82508 0.00069593 -0.19185 -0.00016182 0.63323 0.00053412 843.475430205399 847.481696856867 100.52 0.51198 100.52 100.31 100.83 0 165 41 6 0 0 0 3.1697E-15 4 63101 130.56 116.56 1 0.54701 0.56049 0 25538000 15700000 9837900 18162 1486 6844 7008 28437;28438;28439;28440 28439 ITNLTQQLEQASIVK 15 1 0 Unmodified _ITNLTQQLEQASIVK_ 0 0 0 P15924 P15924 P15924 DSP Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 843.4783 2 843.475251 1684.93595 67661.67 1.0833 0.00091372 -0.67212 -0.00056692 0.41116 0.00034681 843.474923658975 847.481627060387 113.99 0.41315 113.99 113.84 114.25 -7.6294E-06 89 17 7 0 0 0 0.027869 1 66485 28.206 28.206 1 0.55481 0.43961 0 4857300 3226000 1631300 18163 1486 6844 7008 28441 28441 ITNLTQQLEQASIVK 15 1 0 Unmodified _ITNLTQQLEQASIVK_ 0 0 0 P15924 P15924 P15924 DSP Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 843.4755 2 843.475251 1684.93595 68437.82 0.67494 0.00056929 -0.22614 -0.00019074 0.4488 0.00037855 843.475362047793 847.482217757582 113.89 0.40913 113.89 113.67 114.08 0 84 18 7 0 0 0 0.010829 1 65445 34.768 34.768 1 0.45151 0.37051 0 5272100 3387400 1884700 18164 1486 6844 7008 28442 28442 ITPAHDQNDYEVGQR 15 0 1 Unmodified _ITPAHDQNDYEVGQR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.9445 3 581.607935 1741.80198 79448.37 0.65411 0.00038043 0.057493 3.3439E-05 0.7116 0.00041387 581.942223665749 584.94409824603 25.089 0.30787 25.089 24.946 25.254 0 58 14 6 0 0 0 6.909E-05 1 10719 62.055 57.953 1 1.0914 1.1096 0 27566000 14485000 13080000 18165 363 6845 7009 28443 28443 ITPAHDQNDYEVGQR 15 0 1 Unmodified _ITPAHDQNDYEVGQR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.9114 2 871.908264 1741.80198 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.115 1 25.115 24.615 25.615 0 0 0 0 0.00025697 1 10764 83.182 65.815 1 18166 363 6845 7009 28444 28444 ITPAHDQNDYEVGQR 15 0 1 Unmodified _ITPAHDQNDYEVGQR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.2786 3 581.607935 1741.80198 79858.33 0.56662 0.00032955 -0.098698 -5.7404E-05 0.46792 0.00027215 581.942194777556 584.943943138595 24.893 0.30017 24.893 24.738 25.038 0 51 12 6 0 0 0 6.789E-06 1 10568 87.148 81.568 1 0.93179 1.0402 0 44274000 25331000 18942000 18167 363 6845 7009 28445 28445 ITPAHDQNDYEVGQR 15 0 1 Unmodified _ITPAHDQNDYEVGQR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.942 3 581.607935 1741.80198 79613.13 0.089932 5.2305E-05 0.22628 0.00013161 0.31622 0.00018391 581.942253763526 584.944136035183 28.93 0.29463 28.93 28.806 29.101 0 75 15 7 0 0 0 0.026467 1 11185 21.272 19.305 1 0.63359 0.56981 0 2253100 1387300 865840 18168 363 6845 7009 28446 28446 ITPENLPQILLQLK 14 1 0 Unmodified _ITPENLPQILLQLK_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.4978 2 810.490173 1618.96579 68540.55 1.153 0.00093453 -0.23762 -0.00019259 0.91543 0.00074195 810.490061975794 814.496980125433 130.9 0.89555 130.9 130.4 131.3 0 417 57 10 0 0 0 3.0569E-15 2 85147 136.96 136.96 1 1.5397 1.6595 0 41267000 18041000 23225000 18169 542 6846 7010 28447;28448 28447 ITPENLPQILLQLK 14 1 0 Unmodified _ITPENLPQILLQLK_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.4981 2 810.490173 1618.96579 68139.41 0.83754 0.00067882 0.043006 3.4856E-05 0.88055 0.00071367 810.991880861177 814.497127507456 130.38 0.90036 130.38 129.98 130.88 0 414 59 10 0 0 0 1.4294E-06 2 86973 108.47 108.47 1 1.504 1.6782 0 52398000 22132000 30267000 18170 542 6846 7010 28449;28450 28449 ITPSYVAFTPEGER 14 0 1 Unmodified _ITPSYVAFTPEGER_ 0 0 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.8997 2 783.893563 1565.77257 68880.25 1.0395 0.00081488 -0.36689 -0.00028761 0.67263 0.00052727 783.892659356109 788.897807280661 84.109 0.69534 84.109 83.765 84.46 0 231 54 7 0 0 0 0.00018067 2 50234 72.089 64.55 1 0.86277 0.9436 0 52542000 30154000 22389000 18171 1466 6847 7011 28451;28452 28452 ITPSYVAFTPEGER 14 0 1 Unmodified _ITPSYVAFTPEGER_ 0 0 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.8914 2 783.893563 1565.77257 67626.77 0.6291 0.00049315 -0.13071 -0.00010246 0.4984 0.00039069 784.395349663001 788.897637007801 83.088 0.58243 83.088 82.771 83.354 -7.6294E-06 217 44 6 0 0 0 0.00022772 2 50746 65.395 56.073 1 0.86585 0.94713 0 34348000 18475000 15873000 18172 1466 6847 7011 28453;28454 28453 ITPSYVAFTPEGER 14 0 1 Unmodified _ITPSYVAFTPEGER_ 0 0 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 788.8977 2 783.893563 1565.77257 68763.7 0.86272 0.00067628 -0.18946 -0.00014851 0.67326 0.00052776 784.394822599923 788.897045284472 96.205 0.69901 96.205 95.873 96.572 7.6294E-06 228 43 8 0 0 0 0.00074015 2 54010 58.674 48.987 1 0.60592 0.52112 0 6848100 4154500 2693600 18173 1466 6847 7011 28455;28456 28456 ITPSYVAFTPEGER 14 0 1 Unmodified _ITPSYVAFTPEGER_ 0 0 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.8961 2 783.893563 1565.77257 69237.94 0.46105 0.00036141 0.35953 0.00028184 0.82058 0.00064325 783.893739388138 788.897373174835 96.117 0.78183 96.117 95.698 96.48 0 281 50 9 0 0 0 0.00024871 2 53013 62.408 58.645 1 0.64143 0.53259 0 5858300 3235700 2622500 18174 1466 6847 7011 28457;28458 28458 ITPVTVK 7 1 0 Unmodified _ITPVTVK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;S4R349;S4R3C2 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.245 2 379.244547 756.47454 97711.7 0.23937 9.078E-05 0.36759 0.00013941 0.60697 0.00023019 379.244547361202 383.251732421289 32.36 0.6706 32.36 31.997 32.668 0 231 60 6 0 0 0 0.032931 1 16050 64.757 21.691 1 1.1141 1.1997 0 40762000 19537000 21225000 18175 468 6848 7012 28459 28459 ITPVTVK 7 1 0 Unmodified _ITPVTVK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;S4R349;S4R3C2 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.2445 2 379.244547 756.47454 97637.52 0.68656 0.00026037 0.67865 0.00025738 1.3652 0.00051775 379.244637905331 383.251860062299 31.686 0.46185 31.686 31.378 31.84 1.9073E-06 157 41 6 0 0 0 0.032931 1 15704 64.757 21.691 1 1.1138 1.2461 0 84958000 37112000 47846000 18176 468 6848 7012 28460 28460 ITQDIFQQLLK 11 1 0 Unmodified _ITQDIFQQLLK_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9;H0YHV5 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.895 2 673.887552 1345.76055 74700.98 0.62471 0.00042099 0.18094 0.00012193 0.80565 0.00054292 673.887485718975 677.894686583667 116.51 0.64346 116.51 116.3 116.94 0 180 40 7 0 0 0 2.0714E-12 1 76253 141.48 127.71 1 3.2365 3.3039 0 31354000 9321800 22032000 18177 732 6849 7013 28461 28461 ITQDIFQQLLK 11 1 0 Unmodified _ITQDIFQQLLK_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9;H0YHV5 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.8879 2 673.887552 1345.76055 73494.71 0.73546 0.00049562 0.01723 1.1611E-05 0.75269 0.00050723 673.887381366952 677.894625618774 129.24 0.51514 129.24 128.99 129.5 0 109 23 7 0 0 0 0.00076687 2 78164 72.643 72.643 1 1.3708 1.0839 0 5113500 2260300 2853200 18178 732 6849 7013 28462;28463 28463 ITQDIFQQLLK 11 1 0 Unmodified _ITQDIFQQLLK_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9;H0YHV5 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.895 2 673.887552 1345.76055 73754.63 0.91483 0.00061649 -0.097826 -6.5924E-05 0.817 0.00055057 673.887362698255 677.894525371372 128.99 0.61288 128.99 128.72 129.33 0 100 24 6 0 0 0 7.8974E-05 1 77049 98.044 89.947 1 1.3582 1.0975 0 4333800 1666900 2666800 18179 732 6849 7013 28464 28464 ITQDTLYWNNYK 12 1 0 Unmodified _ITQDTLYWNNYK_ 0 0 0 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.8875 2 779.880456 1557.74636 69763.65 0.50604 0.00039465 -0.17176 -0.00013395 0.33428 0.0002607 779.880551827801 783.887557005722 77.599 1.0418 77.599 76.971 78.013 0 345 84 8 0 0 0 4.7394E-24 2 45774 162.88 162.88 1 0.78383 0.84495 0 37688000 20474000 17213000 18180 1936 6850 7014 28465;28466 28466 ITQDTLYWNNYK 12 1 0 Unmodified _ITQDTLYWNNYK_ 0 0 0 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.3886 2 779.880456 1557.74636 69529.79 0.30237 0.00023581 0.11919 9.2952E-05 0.42156 0.00032876 779.880619121059 783.887865294993 76.583 0.75548 76.583 76.138 76.893 0 280 59 8 0 0 0 1.1746E-17 2 46150 138.08 132.36 1 0.62448 0.68816 0 43349000 25971000 17379000 18181 1936 6850 7014 28467;28468 28468 ITQDTLYWNNYK 12 1 0 Unmodified _ITQDTLYWNNYK_ 0 0 0 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.8878 2 779.880456 1557.74636 68165.78 0.91393 0.00071276 -0.38148 -0.00029751 0.53245 0.00041525 779.880286867912 783.887415970693 88.946 0.74312 88.946 88.581 89.324 -7.6294E-06 277 48 8 0 0 0 2.5204E-08 2 49059 119.68 119.68 1 1.1594 0.90762 0 16492000 7588700 8903800 18182 1936 6850 7014 28469;28470 28469 ITQDTLYWNNYK 12 1 0 Unmodified _ITQDTLYWNNYK_ 0 0 0 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.8882 2 779.880456 1557.74636 69084.54 0.37993 0.0002963 -0.12112 -9.4462E-05 0.25881 0.00020184 779.880415588357 783.887625923804 88.949 0.73019 88.949 88.641 89.371 0 256 47 8 0 0 0 8.3022E-30 2 48248 173.37 173.37 1 1.1467 0.93073 0 13166000 5961500 7204200 18183 1936 6850 7014 28471;28472 28471 ITQQGTDPLVLAVQSK 16 1 0 Unmodified _ITQQGTDPLVLAVQSK_ 0 0 0 Q8N556 Q8N556 Q8N556 AFAP1 Actin filament-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.4816 2 849.475251 1696.93595 69234.53 1.028 0.00087323 -0.71409 -0.0006066 0.31387 0.00026662 849.474851614873 853.983181523217 90.495 0.32535 90.495 90.333 90.659 0 72 27 4 0 0 0 0.00015219 3 54656 65.219 65.219 1 1.62 1.592 0 20156000 7387800 12769000 18184 1910 6851 7015 28473;28474;28475 28473 ITQQGTDPLVLAVQSK 16 1 0 Unmodified _ITQQGTDPLVLAVQSK_ 0 0 0 Q8N556 Q8N556 Q8N556 AFAP1 Actin filament-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 853.4824 2 849.475251 1696.93595 NaN NaN NaN -0.79382 -0.00067433 NaN NaN NaN NaN 89.613 0.39251 89.613 89.418 89.81 0 0 0 0 4.8029E-05 1 55262 78.486 63.586 1 NaN NaN 0 7955300 0 7955300 18185 1910 6851 7015 28476 28476 ITQQGTDPLVLAVQSK 16 1 0 Unmodified _ITQQGTDPLVLAVQSK_ 0 0 0 Q8N556 Q8N556 Q8N556 AFAP1 Actin filament-associated protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.475 2 849.475251 1696.93595 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.502 1 89.502 89.002 90.002 0 0 0 0 0.0010258 1 55264 70.412 54.522 1 18186 1910 6851 7015 28477 28477 ITQQGTDPLVLAVQSK 16 1 0 Unmodified _ITQQGTDPLVLAVQSK_ 0 0 0 Q8N556 Q8N556 Q8N556 AFAP1 Actin filament-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 853.9834 2 849.475251 1696.93595 67842.59 0.67258 0.00057134 -0.12115 -0.00010292 0.55143 0.00046842 849.475028724248 853.983832198894 103.63 0.42363 103.63 103.46 103.88 0 92 27 5 0 0 0 0.025276 1 58932 26.112 23.462 1 1.9497 1.5452 0 4791600 1620700 3170900 18187 1910 6851 7015 28478 28478 ITQSNAILR 9 0 1 Unmodified _ITQSNAILR_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3;Q9UE37;E9PLF1;E9PHN7;A8HT81;E9PHN6;Q6ZSP8;Q5T8Q9;Q0D2I8;F6XZQ7;P28161 Q6FGJ9 Q6FGJ9 GSTM3;GSTmu3;GSTM2;GSTM5 Glutathione S-transferase Mu 3;Glutathione S-transferase Mu 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.3036 2 508.298373 1014.58219 83337.46 0.59025 0.00030003 -0.38085 -0.00019359 0.2094 0.00010644 508.297750020203 513.302319679122 38.952 0.73494 38.952 38.536 39.271 0 259 59 7 0 0 0 0.00070403 2 20109 95.531 70.608 1 2.4341 2.7007 0 68255000 16828000 51427000 18188 1503 6852 7016 28479;28480 28480 ITQSNAILR 9 0 1 Unmodified _ITQSNAILR_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3;Q9UE37;E9PLF1;E9PHN7;A8HT81;E9PHN6;Q6ZSP8;Q5T8Q9;Q0D2I8;F6XZQ7;P28161 Q6FGJ9 Q6FGJ9 GSTM3;GSTmu3;GSTM2;GSTM5 Glutathione S-transferase Mu 3;Glutathione S-transferase Mu 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.7771 2 508.298373 1014.58219 84752.07 0.19892 0.00010111 -0.29534 -0.00015012 -0.096415 -4.9008E-05 508.297780689351 513.302389587401 37.997 0.64598 37.997 37.682 38.328 0 224 49 7 0 0 0 0.0014577 1 19793 107.59 68.802 1 2.3671 2.7002 0 141120000 36927000 104190000 18189 1503 6852 7016 28481 28481 ITQSNAILR 9 0 1 Unmodified _ITQSNAILR_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3;Q9UE37;E9PLF1;E9PHN7;A8HT81;E9PHN6;Q6ZSP8;Q5T8Q9;Q0D2I8;F6XZQ7;P28161 Q6FGJ9 Q6FGJ9 GSTM3;GSTmu3;GSTM2;GSTM5 Glutathione S-transferase Mu 3;Glutathione S-transferase Mu 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.3022 2 508.298373 1014.58219 NaN NaN NaN -0.43071 -0.00021893 NaN NaN NaN NaN 44.132 0.57948 44.132 43.85 44.43 0 0 0 0 0.0036992 1 20971 77.923 47.737 1 NaN NaN 0 2837800 0 2837800 18190 1503 6852 7016 28482 28482 ITQYLIR 7 0 1 Unmodified _ITQYLIR_ 0 0 0 Q9BXY0;H0YBV6 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.7778 2 453.774003 905.533452 91205.24 0.11805 5.3568E-05 0.013462 6.1088E-06 0.13151 5.9676E-05 453.773902159368 458.778080192196 59.104 0.69405 59.104 58.782 59.476 0 260 54 6 0 0 0 0.026656 2 33589 75.311 42.573 1 0.82017 0.90858 0 63675000 32004000 31672000 18191 2016 6853 7017 28483;28484 28483 ITQYLIR 7 0 1 Unmodified _ITQYLIR_ 0 0 0 Q9BXY0;H0YBV6 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.774 2 453.774003 905.533452 89324.16 0.10647 4.8314E-05 0.21388 9.7054E-05 0.32035 0.00014537 453.773967675611 458.778063141817 57.994 0.75021 57.994 57.643 58.393 0 244 56 6 0 0 0 0.032358 1 33598 65.672 33.737 1 0.8511 0.9824 0 70902000 35320000 35583000 18192 2016 6853 7017 28485 28485 ITSCIFQLLQEAGIK 15 1 0 Unmodified _ITSCIFQLLQEAGIK_ 0 0 0 E9PBS1;A0A024RD93;P22234;B4DGX3 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.9758 2 860.968748 1719.92294 66719.07 0.50367 0.00043364 -0.11146 -9.596E-05 0.39221 0.00033768 860.968934256735 865.476296211626 133.4 0.24556 133.4 133.26 133.5 0 23 6 7 0 0 0 3.5939E-05 1 87386 86.313 86.313 1 1.1432 1.1226 0 23102000 10679000 12423000 18193 380 6854 7018 28486 28486 ITSCIFQLLQEAGIK 15 1 0 Unmodified _ITSCIFQLLQEAGIK_ 0 0 0 E9PBS1;A0A024RD93;P22234;B4DGX3 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.9719 2 860.968748 1719.92294 66525.91 0.51841 0.00044634 0.18568 0.00015987 0.7041 0.00060621 860.96936889169 865.477737107517 133.28 0.41617 133.28 133.03 133.44 0 34 12 5 0 0 0 1.4168E-22 1 89459 148.78 148.78 1 1.2838 1.2934 0 27038000 11966000 15072000 18194 380 6854 7018 28487 28487 ITSEAIGQLHR 11 0 1 Unmodified _ITSEAIGQLHR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.8947 3 408.894688 1223.66223 NaN NaN NaN -0.13461 -5.5041E-05 NaN NaN NaN NaN 38.397 0.38115 38.397 38.199 38.58 0 0 0 0 0.041207 1 19706 28.328 18.374 1 NaN NaN 0 28005000 28005000 0 18195 44 6855 7019 28488 28488 ITSEAIGQLHR 11 0 1 Unmodified _ITSEAIGQLHR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.839 2 612.838394 1223.66223 78976.81 0.31638 0.00019389 0.35923 0.00022015 0.67561 0.00041404 612.838379782884 617.842676093606 37.199 0.28348 37.199 37.057 37.341 0 75 22 5 0 0 0 0.00043772 2 19255 78.516 78.516 1 0.65458 0.6572 0 19104000 11570000 7533900 18196 44 6855 7019 28489;28490 28489 ITSEMGSASQANIR 14 0 1 Oxidation (M) _ITSEM(ox)GSASQANIR_ ITSEM(1)GSASQANIR ITSEM(199.09)GSASQANIR 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.8621 2 740.856654 1479.69876 70306.41 0.70825 0.00052471 -0.34719 -0.00025722 0.36106 0.00026749 740.856518413753 745.860705093332 24.198 0.42415 24.198 23.995 24.42 0 108 18 8 0 0 0 3.5463E-58 2 9874 199.09 180.78 1 1.1625 1.2856 0 59042000 27655000 31386000 18197 897 6856 7020 28491;28492 28492 710 ITSEMGSASQANIR 14 0 1 Oxidation (M) _ITSEM(ox)GSASQANIR_ ITSEM(1)GSASQANIR ITSEM(186.87)GSASQANIR 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.8606 2 740.856654 1479.69876 70437.44 0.29261 0.00021678 -0.22033 -0.00016323 0.072275 5.3545E-05 740.856700257546 745.860820461147 23.951 0.40212 23.951 23.725 24.127 0 89 15 9 0 0 0 1.4422E-47 2 9670 186.87 168.56 1 1.1986 1.3797 0 74333000 35863000 38470000 18198 897 6856 7020 28493;28494 28493 710 ITSEMGSASQANIR 14 0 1 Oxidation (M) _ITSEM(ox)GSASQANIR_ ITSEM(1)GSASQANIR ITSEM(77.06)GSASQANIR 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 745.8609 2 740.856654 1479.69876 68900.54 0.67456 0.00049976 -0.42796 -0.00031706 0.24661 0.0001827 740.856488030757 745.860596774955 27.162 0.52402 27.162 26.926 27.45 -1.9073E-06 143 26 8 0 0 0 7.1832E-05 1 10471 77.062 66.539 1 0.91114 0.78074 0 6107100 3064000 3043100 18199 897 6856 7020 28495 28495 710 ITSEMGSASQANIR 14 0 1 Oxidation (M) _ITSEM(ox)GSASQANIR_ ITSEM(1)GSASQANIR ITSEM(88.19)GSASQANIR 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 746.3626 2 740.856654 1479.69876 69247.48 0.34428 0.00025506 -0.36092 -0.00026739 -0.016643 -1.233E-05 740.856602198554 745.860831442677 27.431 0.60423 27.431 27.091 27.695 -1.9073E-06 108 23 7 0 0 0 3.9792E-05 2 10075 88.187 69.407 1 0.88496 0.73834 0 4970200 2641900 2328200 18200 897 6856 7020 28496;28497 28496 710 ITSEMGSASQANIR 14 0 1 Unmodified _ITSEMGSASQANIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8602 2 732.859197 1463.70384 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.767 1 39.767 39.267 40.267 0 0 0 0 0.0025053 1 20676 62.466 45.795 1 18201 897 6856 7021 28498 28498 ITSEMGSASQANIR 14 0 1 Unmodified _ITSEMGSASQANIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.8593 2 732.859197 1463.70384 70783.41 0.46757 0.00034266 0.00062201 4.5584E-07 0.46819 0.00034312 732.858933133319 737.863553866092 46.153 0.61892 46.153 45.927 46.546 0 207 44 7 0 0 0 0.0007398 2 22178 58.676 58.676 1 1.261 1.0614 0 4550100 1890200 2659900 18202 897 6856 7021 28499;28500 28500 ITSEMGSASQANIR 14 0 1 Unmodified _ITSEMGSASQANIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.8633 2 732.859197 1463.70384 70592.38 0.34684 0.00025419 -0.19648 -0.00014399 0.15036 0.00011019 732.859030300592 737.863457252713 46.515 0.62849 46.515 46.182 46.81 0 164 35 8 0 0 0 0.00016295 2 21801 74.611 74.611 1 1.2911 1.1332 0 4165200 1803600 2361600 18203 897 6856 7021 28501;28502 28502 ITSGPFEPDLYK 12 1 0 Unmodified _ITSGPFEPDLYK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.8563 2 683.848093 1365.68163 NaN NaN NaN 0.29276 0.0002002 NaN NaN NaN NaN 84.78 0.65115 84.78 84.56 85.211 0 0 0 0 2.3368E-05 1 50826 100.48 54.797 1 NaN NaN 0 25409000 0 25409000 18204 328 6857 7022 28503 28503 ITSGPFEPDLYK 12 1 0 Unmodified _ITSGPFEPDLYK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.8563 2 683.848093 1365.68163 NaN NaN NaN 0.34615 0.00023672 NaN NaN NaN NaN 96.904 0.59485 96.904 96.631 97.226 0 0 0 0 0.00088271 1 54460 84.17 35.374 1 NaN NaN 0 2718300 0 2718300 18205 328 6857 7022 28504 28504 ITSPLMEPSSIEK 13 1 0 Oxidation (M) _ITSPLM(ox)EPSSIEK_ ITSPLM(1)EPSSIEK ITSPLM(64.82)EPSSIEK 0 1 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.3782 2 724.371075 1446.7276 NaN NaN NaN -0.033558 -2.4309E-05 NaN NaN NaN NaN 69.451 0.59025 69.451 69.133 69.723 0 0 0 0 0.0010999 1 40352 64.82 40.79 1 NaN NaN 0 14004000 0 14004000 18206 595 6858 7023 28505 28505 454 ITSPLMEPSSIEK 13 1 0 Oxidation (M) _ITSPLM(ox)EPSSIEK_ ITSPLM(1)EPSSIEK ITSPLM(100.88)EPSSIEK 0 1 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.3789 2 724.371075 1446.7276 NaN NaN NaN 0.052395 3.7953E-05 NaN NaN NaN NaN 68.283 0.5997 68.283 67.991 68.59 0 0 0 0 2.0475E-06 1 40617 100.88 54.416 1 NaN NaN 0 18522000 0 18522000 18207 595 6858 7023 28506 28506 454 ITSQIFIGPTYYQR 14 0 1 Unmodified _ITSQIFIGPTYYQR_ 0 0 0 C9J2Y9;B4DHJ3;P30876;B4DR40;C9J4M6;B4DH29;B2WTN6 C9J2Y9 C9J2Y9 POLR2B;rpB2 DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.4518 2 843.94613 1685.87771 70544.72 0.85644 0.00072279 0.46481 0.00039228 1.3213 0.0011151 843.946304814887 849.452655206787 98.036 0.44551 98.036 97.776 98.222 0 96 35 4 0 0 0 0.0012859 3 59757 54.776 47.302 1 0.87334 0.91298 0 10702000 6502900 4199400 18208 975 6859 7024 28507;28508;28509 28507 ITSQIFIGPTYYQR 14 0 1 Unmodified _ITSQIFIGPTYYQR_ 0 0 0 C9J2Y9;B4DHJ3;P30876;B4DR40;C9J4M6;B4DH29;B2WTN6 C9J2Y9 C9J2Y9 POLR2B;rpB2 DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.948 2 843.94613 1685.87771 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.884 1 97.884 97.384 98.384 -7.6294E-06 0 0 0 0.0076164 1 59768 53.569 29.187 1 18209 975 6859 7024 28510 28510 ITTHFELK 8 1 0 Unmodified _ITTHFELK_ 0 0 0 Q7Z4Y4;Q9UIJ7 Q7Z4Y4 Q7Z4Y4 AK3 GTP:AMP phosphotransferase AK3, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.7766 2 494.776742 987.538931 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.534 1 31.534 31.034 32.034 1.9073E-06 0 0 0 0.041785 1 15562 57.281 3.076 1 18210 1878 6860 7025 28511 28511 ITTHFELK 8 1 0 Unmodified _ITTHFELK_ 0 0 0 Q7Z4Y4;Q9UIJ7 Q7Z4Y4 Q7Z4Y4 AK3 GTP:AMP phosphotransferase AK3, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.7837 2 494.776742 987.538931 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.071 1 29.071 28.571 29.571 0 0 0 0 0.041785 1 13953 57.281 19.723 1 18211 1878 6860 7025 28512 28512 ITTHFELK 8 1 0 Unmodified _ITTHFELK_ 0 0 0 Q7Z4Y4;Q9UIJ7 Q7Z4Y4 Q7Z4Y4 AK3 GTP:AMP phosphotransferase AK3, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7695 2 494.776742 987.538931 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.684 1 30.684 30.184 31.184 0 0 0 0 0.00424 1 15078 91.626 45.256 1 18212 1878 6860 7025 28513 28513 ITTHFELK 8 1 0 Unmodified _ITTHFELK_ 0 0 0 Q7Z4Y4;Q9UIJ7 Q7Z4Y4 Q7Z4Y4 AK3 GTP:AMP phosphotransferase AK3, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7769 2 494.776742 987.538931 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.755 1 30.755 30.255 31.255 -1.9073E-06 0 0 0 0.0045728 1 15124 89.55 42.468 1 18213 1878 6860 7025 28514 28514 ITTHFELK 8 1 0 Unmodified _ITTHFELK_ 0 0 0 Q7Z4Y4;Q9UIJ7 Q7Z4Y4 Q7Z4Y4 AK3 GTP:AMP phosphotransferase AK3, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7769 2 494.776742 987.538931 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.798 1 30.798 30.298 31.298 0 0 0 0 0.016956 1 15149 69.176 27.949 1 18214 1878 6860 7025 28515 28515 ITTVIQHVFQNLILGSK 17 1 0 Unmodified _ITTVIQHVFQNLILGSK_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5;H0Y9E6 B3KVZ3 B3KVZ3 CENPH Centromere protein H ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.0424 3 637.706921 1910.09893 NaN NaN NaN 0.083458 5.3222E-05 NaN NaN NaN NaN 128.23 0.50562 128.23 127.89 128.4 0 0 0 0 0.0004445 2 85755 58.09 41.784 1 NaN NaN 0 3431100 3431100 0 18215 585 6861 7026 28516;28517 28516 ITTVNSVLPQNSVLGGVLK 19 1 0 Unmodified _ITTVNSVLPQNSVLGGVLK_ 0 0 0 Q8NCN4 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.0637 2 970.064765 1938.11498 65192.57 0.26881 0.00026076 0.26326 0.00025538 0.53207 0.00051614 970.065544903087 974.573483387183 116.7 0.27676 116.7 116.55 116.83 -7.6294E-06 59 17 5 0 0 0 0.0038951 1 76392 33.204 33.204 1 0.68244 0.71121 0 10027000 6261700 3765700 18216 1923 6862 7027 28518 28518 ITTVNSVLPQNSVLGGVLK 19 1 0 Unmodified _ITTVNSVLPQNSVLGGVLK_ 0 0 0 Q8NCN4 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 970.5665 2 970.064765 1938.11498 63049.21 0.095539 9.2679E-05 0.38956 0.0003779 0.4851 0.00047058 970.566496006028 974.071955814375 129.4 0.40343 129.4 129.2 129.6 0 94 18 8 0 0 0 0.054747 1 78268 20.806 20.806 1 1.5202 1.2152 0 7030600 2680400 4350200 18217 1923 6862 7027 28519 28519 ITTVNSVLPQNSVLGGVLK 19 1 0 Unmodified _ITTVNSVLPQNSVLGGVLK_ 0 0 0 Q8NCN4 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 974.0718 2 970.064765 1938.11498 62948.4 0.42159 0.00040897 0.17417 0.00016895 0.59575 0.00057792 970.065278955651 974.071708028038 129.24 0.35043 129.24 129.05 129.4 0 65 15 6 0 0 0 3.1682E-05 1 77268 55.314 55.314 1 1.6799 1.3814 0 9978500 4028000 5950500 18218 1923 6862 7027 28520 28520 ITVAECIETQSK 12 1 0 Unmodified _ITVAECIETQSK_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q2HXV5;Q5TH12;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8481 2 689.847767 1377.68098 77306.92 0.39595 0.00027315 -0.18443 -0.00012723 0.21152 0.00014592 689.848243208642 693.855334218012 54.943 0.46584 54.943 54.746 55.212 0 117 45 4 0 0 0 6.6475E-18 1 30938 143.5 143.5 1 0.60085 0.5885 0 21999000 11436000 10563000 18219 422;1317 6863 7028 28521 28521 ITVAECIETQSK 12 1 0 Unmodified _ITVAECIETQSK_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q2HXV5;Q5TH12;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8491 2 689.847767 1377.68098 73864.01 0.47789 0.00032967 -0.095427 -6.583E-05 0.38246 0.00026384 690.34882661667 693.854860756485 54.154 0.4977 54.154 53.892 54.39 -3.8147E-06 146 45 5 0 0 0 9.8699E-18 1 30986 140.07 140.07 1 0.59747 0.60422 0 16422000 11922000 4499800 18220 422;1317 6863 7028 28522 28522 ITVAECIETQSK 12 1 0 Unmodified _ITVAECIETQSK_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q2HXV5;Q5TH12;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.8549 2 689.847767 1377.68098 73317.84 0.32998 0.00022763 -0.33045 -0.00022796 -0.00047475 -3.2751E-07 689.847655718195 693.854928587387 64.235 0.55412 64.235 63.969 64.523 0 186 43 6 0 0 0 0.0057222 1 32992 63.073 63.073 1 1.6184 1.2838 0 4510600 1649500 2861100 18221 422;1317 6863 7028 28523 28523 ITVAECIETQSK 12 1 0 Unmodified _ITVAECIETQSK_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q2HXV5;Q5TH12;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.8481 2 689.847767 1377.68098 72858.96 0.28613 0.00019739 -0.70086 -0.00048348 -0.41473 -0.0002861 689.847794262037 693.854959484795 64.82 0.4906 64.82 64.559 65.049 0 191 42 7 0 0 0 0.008222 2 32669 47.971 47.971 1 1.8864 1.4862 0 3249700 1105000 2144700 18222 422;1317 6863 7028 28524;28525 28525 ITVAWCK 7 1 0 Unmodified _ITVAWCK_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.2408 2 439.233656 876.452759 90261.42 0.0041623 1.8282E-06 0.61347 0.00026946 0.61763 0.00027128 439.233838237954 443.240871500287 56.522 0.84832 56.522 56.184 57.033 0 299 78 5 0 0 0 0.028425 2 31773 71.949 23.198 1 0.85662 0.9712 0 93812000 46464000 47347000 18223 1470 6864 7029 28526;28527 28526 ITVAWCK 7 1 0 Unmodified _ITVAWCK_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 439.2339 2 439.233656 876.452759 NaN NaN NaN 0.85669 0.00037629 NaN NaN NaN NaN 65.464 1.0377 65.464 65.049 66.087 0 0 0 0 0.041109 1 33061 62.714 28.976 1 NaN NaN 0 8942700 8942700 0 18224 1470 6864 7029 28528 28528 ITVENEVDLDGPPR 14 0 1 Unmodified _ITVENEVDLDGPPR_ 0 0 0 O43463;Q14828 O43463 O43463 SUV39H1;MG44 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.3903 2 777.393927 1552.7733 68432.19 0.56182 0.00043676 -0.20931 -0.00016272 0.35251 0.00027404 777.39361616347 782.398018337039 78.489 0.72243 78.489 78.111 78.833 0 365 62 9 0 0 0 0.0016399 1 46286 52.247 44.022 1 1.0253 1.1562 0 99311000 48066000 51246000 18225 1385 6865 7030 28529 28529 ITVENEVDLDGPPR 14 0 1 Unmodified _ITVENEVDLDGPPR_ 0 0 0 O43463;Q14828 O43463 O43463 SUV39H1;MG44 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.3929 2 777.393927 1552.7733 69091.23 0.82762 0.00064338 -0.13866 -0.0001078 0.68895 0.00053559 777.39367264616 782.39808017211 77.581 0.87927 77.581 77.068 77.947 0 362 72 8 0 0 0 0.0002288 1 46769 65.241 56.343 1 0.97405 1.109 0 109430000 55086000 54345000 18226 1385 6865 7030 28530 28530 ITVENEVDLDGPPR 14 0 1 Unmodified _ITVENEVDLDGPPR_ 0 0 0 O43463;Q14828 O43463 O43463 SUV39H1;MG44 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 782.3986 2 777.393927 1552.7733 68693.47 0.58524 0.00045496 0.10873 8.4523E-05 0.69397 0.00053949 777.393650203381 782.398127311021 89.979 0.91269 89.979 89.5 90.412 0 371 63 10 0 0 0 1.6336E-37 2 49778 165.66 141.58 1 1.7061 1.4373 0 28058000 10712000 17346000 18227 1385 6865 7030 28531;28532 28531 ITVENEVDLDGPPR 14 0 1 Unmodified _ITVENEVDLDGPPR_ 0 0 0 O43463;Q14828 O43463 O43463 SUV39H1;MG44 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 782.399 2 777.393927 1552.7733 67924.21 0.43697 0.00033969 0.50613 0.00039346 0.9431 0.00073316 777.895585085291 782.398746178469 89.983 0.98124 89.983 89.607 90.588 0 349 65 8 0 0 0 8.3223E-47 2 48937 184.03 154.55 1 1.6316 1.4159 0 24024000 9539300 14484000 18228 1385 6865 7030 28533;28534 28533 ITVLEALR 8 0 1 Unmodified _ITVLEALR_ 0 0 0 Q9NVI7;H0Y2W2;Q96T67;Q5T9A4;Q9H834;Q5T2N8;Q8N3E6 Q9NVI7 Q9NVI7 ATAD3A;ATAD3B;ATAD3C;DKFZp761L1023 ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.787 2 457.78711 913.559667 107570.6 0.32682 0.00014961 0.60381 0.00027642 0.93063 0.00042603 457.786936505479 462.791760749585 86 0.24033 86 85.906 86.146 0 49 19 6 0 0 0 0.0041498 3 53035 94.539 29.736 1 1.6474 1.7217 0 22556000 9699000 12857000 18229 2074 6866 7031 28535;28536;28537 28537 ITVLQLSALLK 11 1 0 Unmodified _ITVLQLSALLK_ 0 0 0 A0A0A0MSW0;Q5T4S7 A0A0A0MSW0 A0A0A0MSW0 UBR4 E3 ubiquitin-protein ligase UBR4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.8995 2 599.892106 1197.76966 NaN NaN NaN 0.22177 0.00013304 NaN NaN NaN NaN 126.29 0.30006 126.29 126.11 126.41 0 0 0 0 0.017926 1 82099 53.751 34.975 1 NaN NaN 0 1110400 0 1110400 18230 482 6867 7032 28538 28538 ITVLQLSALLK 11 1 0 Unmodified _ITVLQLSALLK_ 0 0 0 A0A0A0MSW0;Q5T4S7 A0A0A0MSW0 A0A0A0MSW0 UBR4 E3 ubiquitin-protein ligase UBR4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8926 2 599.892106 1197.76966 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.23 1 126.23 125.73 126.73 -7.6294E-06 0 0 0 0.0078829 1 82131 61.65 38.221 1 18231 482 6867 7032 28539 28539 ITVLQLSALLK 11 1 0 Unmodified _ITVLQLSALLK_ 0 0 0 A0A0A0MSW0;Q5T4S7 A0A0A0MSW0 A0A0A0MSW0 UBR4 E3 ubiquitin-protein ligase UBR4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8924 2 599.892106 1197.76966 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.3 1 126.3 125.8 126.8 -7.6294E-06 0 0 0 0.00084637 1 82181 70.056 46.628 1 18232 482 6867 7032 28540 28540 ITVLQLSALLK 11 1 0 Unmodified _ITVLQLSALLK_ 0 0 0 A0A0A0MSW0;Q5T4S7 A0A0A0MSW0 A0A0A0MSW0 UBR4 E3 ubiquitin-protein ligase UBR4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.8999 2 599.892106 1197.76966 83335.07 0.9124 0.00054734 -0.064066 -3.8433E-05 0.84834 0.00050891 599.892037091761 603.899322142014 125.79 0.23602 125.79 125.67 125.91 0 34 14 4 0 0 0 0.00038376 1 83826 82.749 82.749 1 1.4931 1.6495 0 2275800 1158900 1116900 18233 482 6867 7032 28541 28541 ITVPGNFQGHSGAQCITCSYK 21 1 0 Unmodified _ITVPGNFQGHSGAQCITCSYK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.7037 3 775.696538 2324.06779 67682.55 0.6821 0.00052911 -0.4564 -0.00035403 0.2257 0.00017508 776.030863543678 778.702091604427 71.143 0.79268 71.143 70.817 71.609 0 505 65 12 0 0 0 4.7563E-12 3 41385 97.69 97.69 1 0.64286 0.74038 0 210820000 128260000 82564000 18234 167 6868 7033 28542;28543;28544 28544 ITVPGNFQGHSGAQCITCSYK 21 1 0 Unmodified _ITVPGNFQGHSGAQCITCSYK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.6979 3 775.696538 2324.06779 67600.27 0.64386 0.00049944 -0.53183 -0.00041254 0.11204 8.6906E-05 776.030696768974 778.702083976 69.806 0.74505 69.806 69.482 70.227 -7.6294E-06 480 61 12 0 0 0 1.1548E-08 1 41459 74.029 74.029 1 0.6568 0.76058 0 209270000 131830000 77433000 18235 167 6868 7033 28545 28545 ITVPGNFQGHSGAQCITCSYK 21 1 0 Unmodified _ITVPGNFQGHSGAQCITCSYK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.7031 3 775.696538 2324.06779 68186.68 0.72364 0.00056133 -0.30597 -0.00023734 0.41767 0.00032399 776.030851745058 778.702108387684 81.77 1.0492 81.77 81.499 82.549 0 447 61 13 0 0 0 4.0087E-07 2 44298 50.858 50.858 1 0.95971 0.82269 0 77179000 39587000 37592000 18236 167 6868 7033 28546;28547 28547 ITVPGNFQGHSGAQCITCSYK 21 1 0 Unmodified _ITVPGNFQGHSGAQCITCSYK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.0316 3 775.696538 2324.06779 68396.77 0.63372 0.00049157 -0.31068 -0.00024099 0.32304 0.00025058 776.030831739057 778.702223387074 81.895 0.90058 81.895 81.605 82.505 -7.6294E-06 429 51 13 0 0 0 2.2702E-11 2 43548 88.755 88.755 1 0.95725 0.81221 0 68213000 34897000 33317000 18237 167 6868 7033 28548;28549 28549 ITVPLSVISQPMK 13 1 0 Oxidation (M) _ITVPLSVISQPM(ox)K_ ITVPLSVISQPM(1)K ITVPLSVISQPM(48.44)K 0 1 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.9104 2 714.91017 1427.80579 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.95 1 100.95 100.45 101.45 0 0 0 0 0.008573 1 61970 48.44 32.237 1 18238 135 6869 7034 28550 28550 114 ITVPLVSEVQIAQLR 15 0 1 Unmodified _ITVPLVSEVQIAQLR_ 0 0 0 H7BXI1;A0A087WXU3;A0FGR8 H7BXI1 H7BXI1 ESYT2 Extended synaptotagmin-2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.9272 2 833.498529 1664.98251 67685.64 1.1194 0.00093303 0.037562 3.1308E-05 1.157 0.00096434 834.000035321322 838.502599708284 121.75 0.33916 121.75 121.54 121.88 0 81 22 5 0 0 0 0.04631 1 78685 37.968 37.968 1 2.9149 3.0147 0 6078400 1911000 4167300 18239 432 6870 7035 28551 28551 ITVPLVSEVQIAQLR 15 0 1 Unmodified _ITVPLVSEVQIAQLR_ 0 0 0 H7BXI1;A0A087WXU3;A0FGR8 H7BXI1 H7BXI1 ESYT2 Extended synaptotagmin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.5027 2 833.498529 1664.98251 69603.27 1.1448 0.00095419 -0.46602 -0.00038843 0.67878 0.00056577 834.000005998666 838.502176505333 121.22 0.33914 121.22 121.09 121.42 0 72 21 5 0 0 0 2.8814E-06 1 80229 98.353 98.353 1 2.8078 2.837 0 9939400 2331100 7608300 18240 432 6870 7035 28552 28552 ITVTSEVPFSK 11 1 0 Unmodified _ITVTSEVPFSK_ 0 0 0 Q7Z4W8;P35268;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.3328 2 604.332079 1206.6496 78139.46 0.70505 0.00042609 0.55256 0.00033393 1.2576 0.00076002 604.332285897192 608.339296496368 79.074 1.3934 79.074 78.556 79.95 0 1048 124 14 0 0 0 2.8475E-06 3 46765 111.61 70.578 1 0.82353 0.99888 0 2102000000 1164200000 937730000 18241 1543 6871 7036 28553;28554;28555 28554 ITVTSEVPFSK 11 1 0 Unmodified _ITVTSEVPFSK_ 0 0 0 Q7Z4W8;P35268;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.3395 2 604.332079 1206.6496 77760.74 0.52784 0.00031899 0.32816 0.00019831 0.85599 0.0005173 604.332316126183 608.33913139624 78.007 1.886 78.007 77.35 79.236 0 1010 161 14 0 0 0 2.3069E-12 2 47130 140.45 96.638 1 0.84654 1.0012 0 1734100000 932550000 801590000 18242 1543 6871 7036 28556;28557 28556 ITVTSEVPFSK 11 1 0 Unmodified _ITVTSEVPFSK_ 0 0 0 Q7Z4W8;P35268;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 604.3325 2 604.332079 1206.6496 78091.84 0.53217 0.00032161 0.30424 0.00018386 0.83641 0.00050547 604.332459080353 608.339253713126 90.427 1.4136 90.427 90.093 91.506 0 606 92 10 0 0 0 0.00046797 2 49993 76.143 37.121 1 1.108 0.97553 0 247130000 121980000 125150000 18243 1543 6871 7036 28558;28559 28559 ITVTSEVPFSK 11 1 0 Unmodified _ITVTSEVPFSK_ 0 0 0 Q7Z4W8;P35268;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7 Q7Z4W8 Q7Z4W8 RPL22 60S ribosomal protein L22 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.3326 2 604.332079 1206.6496 78060.97 0.39791 0.00024047 0.2113 0.0001277 0.60921 0.00036817 604.332366227018 608.339202909519 90.336 2.03 90.336 89.967 91.997 0 628 131 10 0 0 0 0.00043595 2 49130 78.655 43.088 1 1.0864 0.93881 0 219680000 107060000 112620000 18244 1543 6871 7036 28560;28561 28561 ITVVPSAK 8 1 0 Unmodified _ITVVPSAK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 407.7551 2 407.755278 813.496004 94743.98 -0.072323 -2.949E-05 0.21866 8.9158E-05 0.14633 5.9668E-05 407.755305583606 411.762322628339 39.737 0.81332 39.737 39.461 40.274 0 327 68 8 0 0 0 0.0058868 2 20613 89.046 58.861 1 1.2103 1.3811 0 177470000 80969000 96500000 18245 1183 6872 7037 28562;28563 28563 ITVVPSAK 8 1 0 Unmodified _ITVVPSAK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 407.7552 2 407.755278 813.496004 94291.62 -0.0775 -3.1601E-05 0.016929 6.9031E-06 -0.060571 -2.4698E-05 407.755211786819 411.762275097139 44.905 1.0755 44.905 44.558 45.634 0 310 79 7 0 0 0 0.031781 1 21323 51.059 29.759 1 1.6151 1.2834 0 19191000 7378600 11812000 18246 1183 6872 7037 28564 28564 ITVVPSAK 8 1 0 Unmodified _ITVVPSAK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 411.7621 2 407.755278 813.496004 92934.54 0.092382 3.7669E-05 -0.14776 -6.025E-05 -0.055378 -2.2581E-05 407.755189591203 411.762169420875 44.893 0.93517 44.893 44.534 45.469 3.8147E-06 294 67 7 0 0 0 0.043896 1 20874 45.972 15.787 1 1.7196 1.3807 0 14577000 5296200 9280500 18247 1183 6872 7037 28565 28565 IVAALNAR 8 0 1 Unmodified _IVAALNAR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.2585 2 414.25852 826.502486 93069.76 0.3172 0.0001314 -0.17097 -7.0827E-05 0.14623 6.0575E-05 414.258429763582 419.262384216967 38.558 0.84342 38.558 38.125 38.968 3.8147E-06 248 69 6 0 0 0 0.0024483 1 19757 99.919 48.463 1 0.87844 0.97321 0 63888000 31243000 32644000 18248 809 6873 7038 28566 28566 IVAALNAR 8 0 1 Unmodified _IVAALNAR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 419.2624 2 414.25852 826.502486 93200.44 -0.22558 -9.3447E-05 0.030235 1.2525E-05 -0.19534 -8.0922E-05 414.258431696223 419.262549517602 43.275 0.76844 43.275 42.908 43.676 0 214 49 6 0 0 0 0.051711 1 20283 43.124 25.357 1 1.2818 1.1019 0 6655200 2775000 3880200 18249 809 6873 7038 28567 28567 IVAALNAR 8 0 1 Unmodified _IVAALNAR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 419.2625 2 414.25852 826.502486 92824.7 -0.50992 -0.00021124 0.42951 0.00017793 -0.080409 -3.331E-05 414.258574397125 419.262732079765 43.28 0.66628 43.28 42.995 43.661 -3.8147E-06 190 40 6 0 0 0 0.063595 1 19727 38.792 21.025 1 1.2656 1.0524 0 6062900 2666100 3396800 18250 809 6873 7038 28568 28568 IVAERPGTNSTGPAPMAPPR 20 0 2 Oxidation (M) _IVAERPGTNSTGPAPM(ox)APPR_ IVAERPGTNSTGPAPM(1)APPR IVAERPGTNSTGPAPM(76.3)APPR 0 1 1 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.025 3 679.017829 2034.03166 72855.72 0.72321 0.00049107 -0.228 -0.00015481 0.49521 0.00033626 679.017646523352 685.689938567292 36.223 0.84047 36.223 35.869 36.71 0 412 79 7 0 0 0 3.0546E-07 2 18171 76.301 76.301 1 1.822 1.9812 0 49307000 19415000 29892000 18251 862 6874 7039 28569;28570 28569 670 IVAERPGTNSTGPAPMAPPR 20 0 2 Oxidation (M) _IVAERPGTNSTGPAPM(ox)APPR_ IVAERPGTNSTGPAPM(1)APPR IVAERPGTNSTGPAPM(100.39)APPR 0 1 1 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.0252 3 679.017829 2034.03166 73049.93 1.0373 0.00070437 -0.16089 -0.00010925 0.87644 0.00059512 679.351850277288 685.690041928095 35.066 0.82314 35.066 34.77 35.593 0 413 74 8 0 0 0 3.2342E-13 2 17862 100.39 100.39 1 2.1267 2.4446 0 56525000 18953000 37573000 18252 862 6874 7039 28571;28572 28572 670 IVAETMNNYLFGER 14 0 1 Oxidation (M) _IVAETM(ox)NNYLFGER_ IVAETM(1)NNYLFGER IVAETM(84.29)NNYLFGER 0 1 0 Q9BYG3;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 836.9044 2 836.903605 1671.79266 66790.34 0.51314 0.00042945 0.11488 9.6144E-05 0.62802 0.00052559 836.903969574399 841.90755138621 92.425 0.77911 92.425 92.052 92.831 -7.6294E-06 221 40 8 0 0 0 5.1174E-05 2 51393 84.289 79.773 1 0.68982 0.58503 0 9281000 5667700 3613300 18253 2019 6875 7040 28573;28574 28574 1854 IVAETMNNYLFGER 14 0 1 Oxidation (M) _IVAETM(ox)NNYLFGER_ IVAETM(1)NNYLFGER IVAETM(67.46)NNYLFGER 0 1 0 Q9BYG3;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 841.7776 2 836.903605 1671.79266 66169.57 0.82743 0.00069248 0.079529 6.6558E-05 0.90696 0.00075904 836.902009629979 841.907204951401 112.36 0.46286 112.36 112.11 112.58 0 96 25 7 0 0 0 0.00070844 1 65252 67.456 67.456 1 0.91325 0.76365 0 3733700 2006700 1727000 18254 2019 6875 7040 28575 28575 1854 IVAETMNNYLFGER 14 0 1 Oxidation (M) _IVAETM(ox)NNYLFGER_ IVAETM(1)NNYLFGER IVAETM(78.69)NNYLFGER 0 1 0 Q9BYG3;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 836.9034 2 836.903605 1671.79266 65326.31 0.42025 0.00035171 -0.01772 -1.483E-05 0.40253 0.00033688 836.903789599548 841.907504358055 92.305 0.74938 92.305 91.954 92.703 -7.6294E-06 225 39 8 0 0 0 6.7174E-05 2 50451 78.692 75.37 1 0.71533 0.58522 0 9081700 4915000 4166700 18255 2019 6875 7040 28576;28577 28577 1854 IVAIGTSDLDK 11 1 0 Unmodified _IVAIGTSDLDK_ 0 0 0 D3DT44;P48507 D3DT44 D3DT44 GCLM Glutamate--cysteine ligase regulatory subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.324 2 566.316428 1130.6183 80708.44 0.61769 0.00034981 0.1131 6.4051E-05 0.73079 0.00041386 566.315807986544 570.323858002887 66.067 0.30623 66.067 65.891 66.197 0 110 29 5 0 0 0 0.00041914 1 38056 79.974 57.234 1 3.0756 3.2372 0 30654000 8261500 22392000 18256 1188 6876 7041 28578 28578 IVALNAHTFLR 11 0 1 Unmodified _IVALNAHTFLR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.2515 3 418.915423 1253.72444 91425.16 0.47547 0.00019918 -0.62691 -0.00026262 -0.15144 -6.3441E-05 418.915265920185 422.251109063803 80.269 1.4382 80.269 79.825 81.263 0 756 121 10 0 0 0 5.6812E-06 4 47498 110.39 110.39 1 0.76893 0.91183 0 595260000 333010000 262250000 18257 1506;683 6877 7042 28579;28580;28581;28582 28579 IVALNAHTFLR 11 0 1 Unmodified _IVALNAHTFLR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.8708 2 627.869497 1253.72444 76010.06 0.8673 0.00054455 0.20715 0.00013006 1.0744 0.00067461 627.869275263348 633.375396616969 80.262 0.66281 80.262 79.989 80.651 0 274 57 6 0 0 0 2.7672E-05 2 47637 118.18 99.397 1 0.78532 0.83972 0 45057000 25036000 20021000 18258 1506;683 6877 7042 28583;28584 28583 IVALNAHTFLR 11 0 1 Unmodified _IVALNAHTFLR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.2513 3 418.915423 1253.72444 90991.98 0.13378 5.6042E-05 -0.41086 -0.00017211 -0.27708 -0.00011607 418.915277029044 422.251298436783 78.621 1.6379 78.621 78.103 79.74 0 830 139 10 0 0 0 0.00041367 4 47426 75.416 65.411 1 0.78307 0.92133 0 1005000000 588020000 416980000 18259 1506;683 6877 7042 28585;28586;28587;28588 28586 IVALNAHTFLR 11 0 1 Unmodified _IVALNAHTFLR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.8697 2 627.869497 1253.72444 77130.88 0.53768 0.00033759 -0.23822 -0.00014957 0.29945 0.00018802 627.869395115318 632.873479057228 78.621 0.70661 78.621 78.255 78.962 0 267 61 7 0 0 0 0.0043738 1 47791 63.076 47.461 1 0.79641 0.91407 0 79972000 47261000 32711000 18260 1506;683 6877 7042 28589 28589 IVALNAHTFLR 11 0 1 Unmodified _IVALNAHTFLR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 422.2509 3 418.915423 1253.72444 91159.09 -0.10189 -4.2681E-05 -0.0054352 -2.2769E-06 -0.10732 -4.4958E-05 418.915534935717 422.25146986993 91.404 1.8374 91.404 91.093 92.931 0 637 114 11 0 0 0 0.00074606 4 50657 51.841 51.841 1 0.91707 0.79404 0 141470000 67371000 74094000 18261 1506;683 6877 7042 28590;28591;28592;28593 28590 IVALNAHTFLR 11 0 1 Unmodified _IVALNAHTFLR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.8742 2 627.869497 1253.72444 76276.92 0.70186 0.00044068 0.039555 2.4835E-05 0.74142 0.00046551 627.869291247168 632.873600533592 91.406 1.0191 91.406 91.151 92.17 -7.6294E-06 382 69 7 0 0 0 0.0012874 2 50719 75.294 64.13 1 0.89868 0.75692 0 27962000 13983000 13979000 18262 1506;683 6877 7042 28594;28595 28594 IVALNAHTFLR 11 0 1 Unmodified _IVALNAHTFLR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 422.2506 3 418.915423 1253.72444 91472.87 -0.40484 -0.00016959 -0.056278 -2.3576E-05 -0.46112 -0.00019317 418.915520068393 422.251451207516 90.993 1.9073 90.993 90.72 92.628 7.6294E-06 642 113 10 0 0 0 0.0020399 4 49585 60.305 60.305 1 0.90139 0.787 0 125160000 63123000 62038000 18263 1506;683 6877 7042 28596;28597;28598;28599 28596 IVALNAHTFLR 11 0 1 Unmodified _IVALNAHTFLR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.8729 2 627.869497 1253.72444 76576.37 0.5355 0.00033623 -0.3429 -0.0002153 0.1926 0.00012093 627.869156061898 632.873393108404 90.998 1.204 90.998 90.767 91.971 0 331 77 8 0 0 0 0.00040918 2 49669 80.755 62.935 1 0.92363 0.8057 0 27773000 14691000 13082000 18264 1506;683 6877 7042 28600;28601 28600 IVALSSSLSNAK 12 1 0 Unmodified _IVALSSSLSNAK_ 0 0 0 O75643;A4FU77;B4E150;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.3504 2 595.342978 1188.6714 78488.52 0.58566 0.00034867 0.23348 0.000139 0.81915 0.00048767 595.343375637276 599.350089011067 61.703 0.77847 61.703 61.404 62.182 0 316 62 8 0 0 0 4.62E-05 2 35220 98.943 98.943 1 0.979 1.1062 0 82675000 41701000 40973000 18265 1411 6878 7043 28602;28603 28603 IVALSSSLSNAK 12 1 0 Unmodified _IVALSSSLSNAK_ 0 0 0 O75643;A4FU77;B4E150;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.3504 2 595.342978 1188.6714 78374.55 0.42275 0.00025168 0.31124 0.00018529 0.73399 0.00043697 595.343335021446 599.35009619173 60.389 0.65526 60.389 60.119 60.774 3.8147E-06 174 40 6 0 0 0 3.4669E-18 2 35207 146.88 146.88 1 0.92376 1.0412 0 60786000 31943000 28843000 18266 1411 6878 7043 28604;28605 28605 IVAVTGAEAQK 11 1 0 Unmodified _IVAVTGAEAQK_ 0 0 0 P49588;H3BPK7 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.8186 2 543.811313 1085.60807 NaN NaN NaN 0.61535 0.00033463 NaN NaN NaN NaN 30.044 0.62872 30.044 29.804 30.433 1.9073E-06 0 0 0 0.0092286 1 14697 60.102 35.948 1 NaN NaN 0 18017000 0 18017000 18267 1583 6879 7044 28606 28606 IVDDWANDGWGLK 13 1 0 Unmodified _IVDDWANDGWGLK_ 0 0 0 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.3618 2 744.859523 1487.70449 69913.3 0.80314 0.00059822 -0.83746 -0.00062379 -0.03432 -2.5564E-05 744.859193791689 748.865266706852 101.3 0.61179 101.3 101.11 101.72 -7.6294E-06 111 46 5 0 0 0 0.031677 2 62180 33.225 33.225 1 1.3497 1.3331 0 8423900 4100500 4323400 18268 1526 6880 7045 28607;28608 28607 IVDDWANDGWGLK 13 1 0 Unmodified _IVDDWANDGWGLK_ 0 0 0 P27824 P27824 P27824 CANX Calnexin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8588 2 744.859523 1487.70449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.72 1 100.72 100.22 101.22 0 0 0 0 0.00073805 1 63306 81.017 62.705 1 18269 1526 6880 7045 28609 28609 IVDDWANDGWGLK 13 1 0 Unmodified _IVDDWANDGWGLK_ 0 0 0 P27824 P27824 P27824 CANX Calnexin MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.8581 2 744.859523 1487.70449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.26 1 113.26 112.76 113.76 0 0 0 0 0.019588 1 65957 47.844 26.38 1 18270 1526 6880 7045 28610 28610 IVDLNFLIGPK 11 1 0 Unmodified _IVDLNFLIGPK_ 0 0 0 G3V1S1;B3KTH1;B3KRG2;A8K359;P19447;Q53HW5 G3V1S1 G3V1S1 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8741 2 614.868631 1227.72271 NaN NaN NaN -1.1117 -0.00068356 NaN NaN NaN NaN 131.87 0.4205 131.87 131.72 132.14 0 0 0 0 0.012268 1 80149 56.258 29.874 1 NaN NaN 0 668770 0 668770 18271 717 6881 7046 28611 28611 IVDLNFLIGPK 11 1 0 Unmodified _IVDLNFLIGPK_ 0 0 0 G3V1S1;B3KTH1;B3KRG2;A8K359;P19447;Q53HW5 G3V1S1 G3V1S1 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.8764 2 614.868631 1227.72271 NaN NaN NaN -0.73266 -0.00045049 NaN NaN NaN NaN 131.65 0.44435 131.65 131.5 131.95 0 0 0 0 0.037514 1 79126 47.96 25.219 1 NaN NaN 0 437470 0 437470 18272 717 6881 7046 28612 28612 IVDNVRPDR 9 0 2 Unmodified _IVDNVRPDR_ 0 0 1 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 361.8685 3 361.868362 1082.58326 100169.4 -0.12725 -4.605E-05 0.80829 0.0002925 0.68104 0.00024645 361.868375793668 368.540459393783 20.573 0.33105 20.573 20.432 20.763 0 64 14 6 0 0 0 0.019169 1 7006 35.511 17.702 1 1.0661 1.1517 0 19540000 8976600 10563000 18273 511 6882 7047 28613 28613 IVDNVRPDR 9 0 2 Unmodified _IVDNVRPDR_ 0 0 1 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 361.8683 3 361.868362 1082.58326 98784.47 0.24911 9.0144E-05 0.16427 5.9444E-05 0.41338 0.00014959 361.868398961959 368.540552244146 20.439 0.34431 20.439 20.224 20.569 0 40 11 6 0 0 0 0.0074428 1 6728 46.462 19.789 1 1.0337 1.1761 0 37732000 17880000 19852000 18274 511 6882 7047 28614 28614 IVDQIRPDR 9 0 2 Unmodified _IVDQIRPDR_ 0 0 1 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1;Q59F66;Q92841 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.3149 2 556.314554 1110.61456 79756.3 0.68729 0.00038235 0.68146 0.0003791 1.3687 0.00076146 556.31475351624 566.322980480413 26.475 0.42629 26.475 26.282 26.708 0 91 24 6 0 0 0 0.018757 1 11831 71.692 51.172 1 0.90885 0.98828 0 49809000 23968000 25842000 18275 1009;1801 6883 7048 28615 28615 IVDQIRPDR 9 0 2 Unmodified _IVDQIRPDR_ 0 0 1 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1;Q59F66;Q92841 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 371.2112 3 371.212128 1110.61456 97302.16 0.20534 7.6226E-05 -0.046989 -1.7443E-05 0.15835 5.8783E-05 371.211786788715 377.884383022088 26.468 0.5809 26.468 26.215 26.796 0 175 36 7 0 0 0 0.00042601 2 11878 78.113 45.362 1 1.5865 1.7296 0 116170000 49357000 66809000 18276 1009;1801 6883 7048 28616;28617 28617 IVDQIRPDR 9 0 2 Unmodified _IVDQIRPDR_ 0 0 1 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1;Q59F66;Q92841 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.3144 2 556.314554 1110.61456 80739.06 0.90608 0.00050407 0.005189 2.8867E-06 0.91127 0.00050695 556.314479800918 566.322793190807 25.957 0.31846 25.957 25.812 26.131 -1.9073E-06 93 18 7 0 0 0 0.0063307 1 11431 88.948 68.428 1 1.3928 1.6408 0 147200000 60176000 87024000 18277 1009;1801 6883 7048 28618 28618 IVDQIRPDR 9 0 2 Unmodified _IVDQIRPDR_ 0 0 1 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1;Q59F66;Q92841 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 377.8845 3 371.212128 1110.61456 97538.8 0.42944 0.00015941 0.072974 2.7089E-05 0.50242 0.0001865 371.212025321305 377.884317472564 25.957 0.45526 25.957 25.812 26.267 0 132 24 7 0 0 0 0.00096019 1 11500 66.692 46.93 1 1.4014 1.6725 0 244350000 100410000 143930000 18278 1009;1801 6883 7048 28619 28619 IVDQIRPDR 9 0 2 Unmodified _IVDQIRPDR_ 0 0 1 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1;Q59F66;Q92841 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 371.2123 3 371.212128 1110.61456 95597.41 -0.0482 -1.7892E-05 0.33172 0.00012314 0.28352 0.00010525 371.212137490598 377.88438211701 29.55 0.62876 29.55 29.265 29.893 0 176 43 5 0 0 0 0.044677 1 12047 26.673 19.027 1 0.81472 0.68916 0 9448100 5108900 4339200 18279 1009;1801 6883 7048 28620 28620 IVDVIGEK 8 1 0 Unmodified _IVDVIGEK_ 0 0 0 A0A0S2Z472;A8KAH7;A0A024R2W3;P13861;H7C4A9 A0A0S2Z472 A0A0S2Z472 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.7655 2 436.758018 871.501483 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.747 1 48.747 48.247 49.247 0 0 0 0 0.052162 1 27330 53.968 3.2645 1 18280 124 6884 7049 28621 28621 IVDVNFQSLLDEDQAPPSSLLVHK 24 1 0 Unmodified _IVDVNFQSLLDEDQAPPSSLLVHK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 891.8074 3 888.800825 2663.38065 NaN NaN NaN 0.15152 0.00013467 NaN NaN NaN NaN 122.4 0.43292 122.4 122.23 122.66 0 0 0 0 0.0023019 1 79202 30.882 23.349 1 NaN NaN 0 7961600 0 7961600 18281 1928 6885 7050 28622 28622 IVDVNFQSLLDEDQAPPSSLLVHK 24 1 0 Unmodified _IVDVNFQSLLDEDQAPPSSLLVHK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 891.8091 3 888.800825 2663.38065 63374.68 1.1177 0.00099343 -0.26236 -0.00023318 0.85537 0.00076025 889.134916453854 891.806559292243 134.29 0.2269 134.29 134.16 134.39 0 59 10 9 0 0 0 0.0011006 2 81924 25.935 25.935 1 1.0549 0.85067 0 22420000 10364000 12055000 18282 1928 6885 7050 28623;28624 28623 IVDVNFQSLLDEDQAPPSSLLVHK 24 1 0 Unmodified _IVDVNFQSLLDEDQAPPSSLLVHK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 891.8076 3 888.800825 2663.38065 63786.03 0.75679 0.00067264 0.17769 0.00015794 0.93449 0.00083057 889.134826754974 891.806929989784 134.22 0.25969 134.22 134.1 134.36 0 79 13 10 0 0 0 0.011455 1 80980 21.022 21.022 1 1.0234 0.81933 0 21592000 9331700 12261000 18283 1928 6885 7050 28625 28625 IVECRPPVVEPDINSTVEHDENR 23 0 2 Unmodified _IVECRPPVVEPDINSTVEHDENR_ 0 0 1 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.0855 4 676.830337 2703.29224 74879.47 0.50839 0.00034409 -0.28499 -0.00019289 0.2234 0.0001512 677.080729990965 681.834182500188 67.808 0.41153 67.808 67.579 67.991 0 160 35 7 0 0 0 0.0012221 1 40212 24.645 24.645 1 0.72303 0.7918 0 19783000 11864000 7919000 18284 1680 6886 7051 28626 28626 IVECRPPVVEPDINSTVEHDENR 23 0 2 Unmodified _IVECRPPVVEPDINSTVEHDENR_ 0 0 1 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.0854 4 676.830337 2703.29224 71731.73 0.56334 0.00038128 -0.21909 -0.00014829 0.34425 0.000233 677.331712002631 681.834338690552 79.171 0.62611 79.171 78.9 79.526 0 245 36 9 0 0 0 0.02197 1 42707 16.59 16.59 1 2.2195 1.8873 0 7721200 2651100 5070100 18285 1680 6886 7051 28627 28627 IVECRPPVVEPDINSTVEHDENR 23 0 2 Unmodified _IVECRPPVVEPDINSTVEHDENR_ 0 0 1 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.834 4 676.830337 2703.29224 71895.84 0.54166 0.00036661 0.11848 8.0194E-05 0.66014 0.00044681 677.081301478781 681.834415395338 79.297 0.73087 79.297 78.913 79.644 -7.6294E-06 240 43 11 0 0 0 0.043008 2 41723 9.9828 8.9294 1 2.192 1.9883 0 5598900 1651200 3947600 18286 1680 6886 7051 28628;28629 28628 IVEDAPPIDLQAEAQHASGEVEEPPR 26 0 1 Unmodified _IVEDAPPIDLQAEAQHASGEVEEPPR_ 0 0 0 C9J2Y9;B4DHJ3;P30876 C9J2Y9 C9J2Y9 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 933.4627 3 933.126149 2796.35662 62891.01 0.65351 0.0006098 -0.45496 -0.00042454 0.19854 0.00018527 933.460971127618 936.460653165917 92.371 0.40494 92.371 92.154 92.559 0 172 39 7 0 0 0 1.4665E-09 3 55916 50.055 44.089 1 1.0309 1.0655 0 23619000 13583000 10036000 18287 975 6887 7052 28630;28631;28632 28630 IVEDAPPIDLQAEAQHASGEVEEPPR 26 0 1 Unmodified _IVEDAPPIDLQAEAQHASGEVEEPPR_ 0 0 0 C9J2Y9;B4DHJ3;P30876 C9J2Y9 C9J2Y9 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 933.1271 3 933.126149 2796.35662 62483.93 0.9314 0.00086911 -0.46193 -0.00043104 0.46947 0.00043807 933.460989384079 936.460345811049 91.712 0.41924 91.712 91.501 91.921 0 143 35 6 0 0 0 1.638E-12 3 56754 64.68 64.68 1 0.90431 0.9641 0 24542000 12171000 12371000 18288 975 6887 7052 28633;28634;28635 28634 IVEDAPPIDLQAEAQHASGEVEEPPR 26 0 1 Unmodified _IVEDAPPIDLQAEAQHASGEVEEPPR_ 0 0 0 C9J2Y9;B4DHJ3;P30876 C9J2Y9 C9J2Y9 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 936.7972 3 933.126149 2796.35662 63800.16 0.6807 0.00063518 0.080723 7.5325E-05 0.76143 0.00071051 933.461042267846 936.796564615507 106.1 0.396 106.1 105.91 106.3 0 106 17 9 0 0 0 0.038651 3 60605 12.612 11.417 1 1.3748 1.1571 0 4539500 1953000 2586500 18289 975 6887 7052 28636;28637;28638 28637 IVEDAPPIDLQAEAQHASGEVEEPPR 26 0 1 Unmodified _IVEDAPPIDLQAEAQHASGEVEEPPR_ 0 0 0 C9J2Y9;B4DHJ3;P30876 C9J2Y9 C9J2Y9 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 936.4623 3 933.126149 2796.35662 63876.17 0.5876 0.0005483 0.41115 0.00038366 0.99875 0.00093196 933.461685217813 936.796571212598 106.04 0.39905 106.04 105.8 106.2 0 125 21 8 0 0 0 0.043131 1 59611 11.421 11.421 1 1.0064 0.88858 0 3666900 1811000 1855900 18290 975 6887 7052 28639 28639 IVELAHSGAR 10 0 1 Unmodified _IVELAHSGAR_ 0 0 0 D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367;Q6VMP0;B1B1I8;Q2XU32;E9PKM0;B1B1I9;B1B1J0 D1KF47 D1KF47 PAX6 Paired box protein Pax-6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 351.533 3 351.533091 1051.57744 103108.7 0.01366 4.8018E-06 0.39314 0.0001382 0.4068 0.000143 351.533141859689 354.869133784505 23.444 0.37742 23.444 23.268 23.646 1.9073E-06 55 16 6 0 0 0 0.002193 1 9333 56.548 47.589 1 0.3707 0.37198 0 9202000 6900100 2301900 18291 927 6888 7053 28640 28640 IVELFR 6 0 1 Unmodified _IVELFR_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 388.7372 2 388.736889 775.459225 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74 1 74 73.5 74.5 0 0 0 0 0.048331 1 43407 75.131 0 1 18292 1015 6889 7054 28641 28641 IVEPYIAWGYPNLK 14 1 0 Unmodified _IVEPYIAWGYPNLK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.9546 2 831.948141 1661.88173 66181.3 1.0504 0.00087391 0.30646 0.00025496 1.3569 0.0011289 831.948146998757 835.954809614174 115.74 1.165 115.74 115.13 116.29 0 416 75 9 0 0 0 6.4168E-05 3 73938 113.93 48.782 1 0.76117 0.87914 0 222750000 128330000 94422000 18293 240 6890 7055 28642;28643;28644 28644 IVEPYIAWGYPNLK 14 1 0 Unmodified _IVEPYIAWGYPNLK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.9498 2 831.948141 1661.88173 NaN NaN NaN 1.8254 0.0015187 NaN NaN NaN NaN 115.17 0.87761 115.17 114.57 115.45 7.6294E-06 0 0 0 5.0405E-06 1 75018 121.6 57.229 1 NaN NaN 0 131440000 131440000 0 18294 240 6890 7055 28645 28645 IVEPYIAWGYPNLK 14 1 0 Unmodified _IVEPYIAWGYPNLK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.9559 2 831.948141 1661.88173 NaN NaN NaN 0.67429 0.00056097 NaN NaN NaN NaN 115.15 0.86481 115.15 114.56 115.42 0 0 0 0 8.0494E-10 1 75037 112.75 54.378 1 NaN NaN 0 103510000 0 103510000 18295 240 6890 7055 28646 28646 IVEPYIAWGYPNLK 14 1 0 Unmodified _IVEPYIAWGYPNLK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.9496 2 831.948141 1661.88173 NaN NaN NaN -0.62103 -0.00051666 NaN NaN NaN NaN 127.17 0.85613 127.17 126.9 127.76 -7.6294E-06 0 0 0 0.0005181 1 76557 95.573 46.073 1 NaN NaN 0 29628000 29628000 0 18296 240 6890 7055 28647 28647 IVEPYIAWGYPNLK 14 1 0 Unmodified _IVEPYIAWGYPNLK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.9504 2 831.948141 1661.88173 NaN NaN NaN 0.33299 0.00027703 NaN NaN NaN NaN 127 0.80237 127 126.72 127.52 0 0 0 0 0.0042547 1 75473 70.17 37.224 1 NaN NaN 0 24169000 24169000 0 18297 240 6890 7055 28648 28648 IVEPYVTWGFPNLK 14 1 0 Unmodified _IVEPYVTWGFPNLK_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B3KMP5;A8K5J5 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 836.4566 2 831.948141 1661.88173 NaN NaN NaN 0.72036 0.0005993 NaN NaN NaN NaN 121.21 0.56981 121.21 121.01 121.58 0 0 0 0 4.9884E-06 1 78206 94.801 35.044 1 NaN NaN 0 20232000 0 20232000 18298 378 6891 7056 28649 28649 IVEPYVTWGFPNLK 14 1 0 Unmodified _IVEPYVTWGFPNLK_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B3KMP5;A8K5J5 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.9562 2 831.948141 1661.88173 67019.42 1.0657 0.00088658 0.82588 0.00068709 1.8915 0.0015737 832.450454894758 835.955452018026 120.84 0.75984 120.84 120.51 121.27 0 227 49 9 0 0 0 1.1755E-06 1 79754 129.7 53.237 1 1.1757 1.2975 0 44099000 22074000 22025000 18299 378 6891 7056 28650 28650 IVEPYVTWGFPNLK 14 1 0 Unmodified _IVEPYVTWGFPNLK_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B3KMP5;A8K5J5 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 836.4592 2 831.948141 1661.88173 67951.05 0.72196 0.00060063 0.5693 0.00047363 1.2913 0.0010743 832.449903138632 835.955381743197 133.66 0.61197 133.66 133.35 133.97 1.5259E-05 137 24 10 0 0 0 0.00022483 1 81309 79.693 31.987 1 1.7631 1.3898 0 17679000 7500200 10179000 18300 378 6891 7056 28651 28651 IVEPYVTWGFPNLK 14 1 0 Unmodified _IVEPYVTWGFPNLK_ 0 0 0 A0A024RD36;Q6DKI1;R4GMU7;B3KMP5;A8K5J5 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 836.462 2 831.948141 1661.88173 68938.51 1.1537 0.00095979 0.3866 0.00032163 1.5403 0.0012814 832.4493633928 835.955456296374 133.35 0.93494 133.35 132.97 133.9 0 144 38 9 0 0 0 0.0070222 1 80183 51.927 15.983 1 1.8195 1.5019 0 11324000 4127700 7196000 18301 378 6891 7056 28652 28652 IVEQDTMPPK 10 1 0 Oxidation (M) _IVEQDTM(ox)PPK_ IVEQDTM(1)PPK IVEQDTM(76.22)PPK 0 1 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010;B4E132 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.3009 2 587.294639 1172.57472 79614.16 0.60888 0.00035759 -1.0078 -0.0005919 -0.39896 -0.00023431 587.294238005523 591.300705558237 22.965 0.40809 22.965 22.718 23.126 0 68 21 4 0 0 0 0.00053206 1 8976 76.221 68.001 1 1.893 1.9135 0 6893300 2114800 4778500 18302 522 6892 7057 28653 28653 382 IVETEAYLGPEDEAAHSR 18 0 1 Unmodified _IVETEAYLGPEDEAAHSR_ 0 0 0 A2IDA3;Q1W6H1;P29372 A2IDA3 A2IDA3 MPG DNA-3-methyladenine glycosylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.3201 3 662.98496 1985.93305 74324.9 0.57526 0.00038139 0.14747 9.7769E-05 0.72273 0.00047916 662.985062478384 666.321552171794 69.371 0.49006 69.371 69.127 69.617 0 181 32 7 0 0 0 0.0017033 2 35546 33.142 33.142 1 0.54637 0.45329 0 5101000 3288400 1812500 18303 651 6893 7058 28654;28655 28654 IVETIEELK 9 1 0 Unmodified _IVETIEELK_ 0 0 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.3151 2 537.308072 1072.60159 85321.95 0.37712 0.00020263 0.25498 0.000137 0.6321 0.00033963 537.308051899566 541.315020396968 70.009 0.39624 70.009 69.839 70.235 0 178 37 7 0 0 0 0.0010522 2 40679 90.657 74.513 1 0.65334 0.64116 0 22893000 14334000 8559000 18304 681 6894 7059 28656;28657 28656 IVETIEELK 9 1 0 Unmodified _IVETIEELK_ 0 0 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.3159 2 537.308072 1072.60159 84490.94 0.46236 0.00024843 0.23935 0.0001286 0.70171 0.00037703 537.30810794481 541.315166640947 68.759 0.38087 68.759 68.603 68.984 0 126 33 5 0 0 0 0.0010227 1 40842 91.069 91.069 1 0.69195 0.71986 0 33790000 20833000 12957000 18305 681 6894 7059 28658 28658 IVETIEELK 9 1 0 Unmodified _IVETIEELK_ 0 0 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.3085 2 537.308072 1072.60159 85300.48 0.39145 0.00021033 0.17672 9.4951E-05 0.56817 0.00030528 537.308107747894 541.315222014475 80.172 0.47086 80.172 79.978 80.448 0 76 31 4 0 0 0 0.050765 1 43354 37.727 37.727 1 1.9014 1.5579 0 2514200 1014300 1499900 18306 681 6894 7059 28659 28659 IVEVLLMK 8 1 0 Oxidation (M) _IVEVLLM(ox)K_ IVEVLLM(1)K IVEVLLM(77.67)K 0 1 0 H0Y6E7;H3BT71;P38159;H3BR27;A8K8A6;O75526 H0Y6E7 H0Y6E7 RBMX;RBMXL2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.8008 2 480.793546 959.57254 88583.09 0.15212 7.314E-05 0.073058 3.5126E-05 0.22518 0.00010827 480.793478422783 484.800607655673 75.477 1.0877 75.477 75.029 76.117 0 354 98 5 0 0 0 0.0041951 1 45277 77.674 57.119 1 1.6915 1.7922 0 35849000 11466000 24383000 18307 1284 6895 7060 28660 28660 982 IVFLHNDR 8 0 1 Unmodified _IVFLHNDR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 338.5221 3 338.522414 1012.54541 102544.4 -0.08389 -2.8399E-05 0.1788 6.0529E-05 0.094912 3.213E-05 338.522383880525 341.858520147192 40.556 0.44661 40.556 40.399 40.846 0 215 40 7 0 0 0 0.0069042 1 21184 51.066 44.762 1 1.0112 1.1263 0 81234000 36726000 44509000 18308 2000 6896 7061 28661 28661 IVFLHNDR 8 0 1 Unmodified _IVFLHNDR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2833 2 507.279983 1012.54541 83919.53 0.41294 0.00020948 0.35831 0.00018176 0.77125 0.00039124 507.280755865575 512.28380671569 40.543 0.29831 40.543 40.428 40.727 0 100 26 5 0 0 0 0.0077612 1 21237 81.548 67.391 1 0.77445 0.80435 0 22382000 12724000 9658000 18309 2000 6896 7061 28662 28662 IVFLHNDR 8 0 1 Unmodified _IVFLHNDR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 338.5221 3 338.522414 1012.54541 99011.58 0.030689 1.0389E-05 -0.26826 -9.0813E-05 -0.23757 -8.0424E-05 338.522301418917 341.858371380572 39.218 0.51089 39.218 39.008 39.519 -3.8147E-06 235 44 8 0 0 0 0.0041442 1 20728 58.981 51.309 1 0.9302 1.0666 0 177950000 86090000 91856000 18310 2000 6896 7061 28663 28663 IVFLHNDR 8 0 1 Unmodified _IVFLHNDR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.2844 2 507.279983 1012.54541 83437.52 0.56403 0.00028612 -0.042891 -2.1758E-05 0.52113 0.00026436 507.280458738589 512.283680768019 45.438 0.45122 45.438 45.22 45.671 0 80 23 5 0 0 0 0.022432 1 21158 57.177 49.948 1 1.513 1.3158 0 2631400 1065600 1565700 18311 2000 6896 7061 28664 28664 IVFPSR 6 0 1 Unmodified _IVFPSR_ 0 0 0 E1NZA1;Q92616;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 359.7161 2 359.715956 717.41736 NaN NaN NaN -3.1773 -0.0011429 NaN NaN NaN NaN 47.464 0.14446 47.464 47.374 47.519 0 0 0 0 0.054024 1 25722 69.39 27.452 1 NaN NaN 0 5150200 5150200 0 18312 1205 6897 7062 28665 28665 IVFSPEEAK 9 1 0 Unmodified _IVFSPEEAK_ 0 0 0 B7ZAF6;E5KS55;Q7Z503;B4DRV2;E5KS60;Q6N0B1;Q9P2R7;A0A0U1RQF8;Q5T9Q5 B7ZAF6 B7ZAF6 SUCLA2;DKFZp686D0880 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7785 2 510.274032 1018.53351 84310.5 0.38717 0.00019756 1.249 0.00063732 1.6361 0.00083488 510.273445846787 514.281761437959 53.814 1.2209 53.814 53.352 54.573 0 155 63 4 0 0 0 0.041513 1 30473 41.429 41.429 1 3.5477 3.817 0 40380000 7743800 32636000 18313 1109 6898 7063 28666 28666 IVFVPGCSIPLTIVK 15 1 0 Unmodified _IVFVPGCSIPLTIVK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 825.9921 2 821.983669 1641.95279 68007.77 0.67642 0.00055601 0.044268 3.6388E-05 0.72069 0.0005924 821.983667752459 825.990833162432 124.28 0.44483 124.28 124.06 124.51 0 154 30 8 0 0 0 0.00053563 2 80653 55.401 55.401 1 1.7432 1.8108 0 11423000 4145000 7278000 18314 1609 6899 7064 28667;28668 28668 IVFVPGCSIPLTIVK 15 1 0 Unmodified _IVFVPGCSIPLTIVK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.9841 2 821.983669 1641.95279 68684.6 0.98095 0.00080633 -0.068449 -5.6264E-05 0.91251 0.00075007 821.983834284161 825.990928037193 123.84 0.44094 123.84 123.65 124.09 0 149 30 7 0 0 0 0.0013515 2 82253 48.004 48.004 1 1.7928 1.7905 0 15112000 5733900 9377700 18315 1609 6899 7064 28669;28670 28670 IVGLQYK 7 1 0 Unmodified _IVGLQYK_ 0 0 0 P11388;Q71UH4;Q02880;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.7571 2 410.749996 819.485439 93089.98 0.3263 0.00013403 -0.0090131 -3.7021E-06 0.31728 0.00013032 410.749989320744 414.756933820903 50.01 0.99799 50.01 49.629 50.627 0 490 88 9 0 0 0 0.019831 2 27465 94.669 45.31 1 0.7791 0.94228 0 1746300000 1002000000 744320000 18316 1471;1679 6900 7065 28671;28672 28672 IVGLQYK 7 1 0 Unmodified _IVGLQYK_ 0 0 0 P11388;Q71UH4;Q02880;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.758 2 410.749996 819.485439 94168.77 0.29528 0.00012129 -0.48754 -0.00020026 -0.19225 -7.8967E-05 410.749809622099 414.756790558723 48.635 1.4264 48.635 48.357 49.784 0 452 114 8 0 0 0 0.010895 2 27126 109.88 49.093 1 0.80179 0.94739 0 1323100000 705380000 617700000 18317 1471;1679 6900 7065 28673;28674 28673 IVGLQYK 7 1 0 Unmodified _IVGLQYK_ 0 0 0 P11388;Q71UH4;Q02880;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 414.7569 2 410.749996 819.485439 92297.77 -0.062052 -2.5488E-05 0.14468 5.9427E-05 0.082626 3.3938E-05 410.75005630012 414.757042661041 57.293 2.6769 57.293 56.939 59.616 0 694 205 8 0 0 0 0.028795 1 28898 71.359 37.356 1 1.3449 1.173 0 164190000 68927000 95262000 18318 1471;1679 6900 7065 28675 28675 IVGLQYK 7 1 0 Unmodified _IVGLQYK_ 0 0 0 P11388;Q71UH4;Q02880;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 414.7573 2 410.749996 819.485439 93875.72 -0.19428 -7.9799E-05 0.085327 3.5048E-05 -0.10895 -4.4751E-05 410.750012013613 414.757027655506 57.607 2.2019 57.607 57.244 59.446 3.8147E-06 673 167 10 0 0 0 0.036835 2 28409 61.123 33.636 1 1.3406 1.1501 0 138310000 57838000 80468000 18319 1471;1679 6900 7065 28676;28677 28676 IVGLTEK 7 1 0 Unmodified _IVGLTEK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 384.2415 2 380.234179 758.453805 98019.52 0.15287 5.8127E-05 0.42023 0.00015978 0.5731 0.00021791 380.23421492392 384.241348663878 36.844 0.95954 36.844 36.322 37.282 0 263 87 4 0 0 0 0.027015 2 18652 85.359 16.875 1 0.84179 0.94538 0 68513000 33947000 34566000 18320 1803 6901 7066 28678;28679 28678 IVGLTEK 7 1 0 Unmodified _IVGLTEK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 384.241 2 380.234179 758.453805 98224.72 0.35537 0.00013512 0.17672 6.7194E-05 0.53209 0.00020232 380.234096034789 384.241241417615 35.911 0.81209 35.911 35.521 36.333 0 303 67 7 0 0 0 0.020094 1 18337 94.407 21.368 1 0.90089 1.0065 0 88853000 51275000 37578000 18321 1803 6901 7066 28680 28680 IVGQADGELNITLPEEVTVK 20 1 0 Unmodified _IVGQADGELNITLPEEVTVK_ 0 0 0 A8K4Q6;O14867;C9JMP6;C9IYR0;C9IYH8 A8K4Q6 A8K4Q6 BACH1 Transcription regulator protein BACH1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1067.0795 2 1063.07298 2124.13141 61869.82 0.32025 0.00034044 -0.14573 -0.00015492 0.17451 0.00018552 1063.57289208522 1067.58213064917 124.48 0.29265 124.48 124.37 124.66 0 36 12 5 0 0 0 0.0058794 1 74593 27.335 27.335 1 2.1292 1.7446 0 2459900 658140 1801800 18322 739 6902 7067 28681 28681 IVILEYQPSK 10 1 0 Unmodified _IVILEYQPSK_ 0 0 0 A8K6V3;Q15393;J3QL37;J3QRB2 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.3525 2 595.344989 1188.67542 80936.57 1.1674 0.00069502 -0.36716 -0.00021858 0.80027 0.00047644 595.3443475397 599.352036519466 80.89 0.54345 80.89 80.613 81.157 0 174 45 6 0 0 0 0.00072198 2 48117 82.287 74.362 1 1.0832 1.1701 0 36755000 12905000 23849000 18323 764 6903 7068 28682;28683 28683 IVILEYQPSK 10 1 0 Unmodified _IVILEYQPSK_ 0 0 0 A8K6V3;Q15393;J3QL37;J3QRB2 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.3453 2 595.344989 1188.67542 80710.19 0.84831 0.00050504 -0.13182 -7.8476E-05 0.71649 0.00042656 595.344374074638 599.35197212048 79.783 0.65993 79.783 79.56 80.22 0 166 51 6 0 0 0 0.00051176 1 48472 85.676 75.895 1 0.95423 0.99622 0 24348000 12318000 12030000 18324 764 6903 7068 28684 28684 IVILEYQPSK 10 1 0 Unmodified _IVILEYQPSK_ 0 0 0 A8K6V3;Q15393;J3QL37;J3QRB2 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.3527 2 595.344989 1188.67542 82241.11 0.54105 0.00032211 0.11816 7.0347E-05 0.65921 0.00039246 595.344795077309 599.352251060003 92.284 0.53548 92.284 92.052 92.588 0 96 28 5 0 0 0 0.0079558 2 51395 56.729 55.549 1 0.75863 0.63321 0 1798800 1016100 782710 18325 764 6903 7068 28685;28686 28686 IVILEYQPSK 10 1 0 Unmodified _IVILEYQPSK_ 0 0 0 A8K6V3;Q15393;J3QL37;J3QRB2 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.3523 2 595.344989 1188.67542 82792.31 0.42574 0.00025346 0.094198 5.6081E-05 0.51994 0.00030954 595.344712469873 599.352191956204 92.187 0.51848 92.187 91.901 92.42 0 108 27 6 0 0 0 0.013114 1 50425 49.715 49.715 1 0.78626 0.65222 0 1793700 1068700 725010 18326 764 6903 7068 28687 28687 IVILPDYLEIAR 12 0 1 Unmodified _IVILPDYLEIAR_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.924 2 707.918852 1413.82315 73304.64 0.69318 0.00049072 0.034772 2.4616E-05 0.72795 0.00051533 707.918345624956 712.922985950541 122.91 0.59203 122.91 122.64 123.23 0 213 44 7 0 0 0 0.00018296 2 79559 77.677 77.677 1 3.3377 3.4659 0 22427000 5099600 17328000 18327 613 6904 7069 28688;28689 28688 IVILPDYLEIAR 12 0 1 Unmodified _IVILPDYLEIAR_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.9198 2 707.918852 1413.82315 72504.21 0.76573 0.00054207 0.085605 6.0602E-05 0.85133 0.00060267 707.918421391965 712.92303731321 122.38 0.59725 122.38 122.13 122.73 0 229 47 8 0 0 0 0.00016364 2 81235 92.062 92.062 1 3.1851 3.4861 0 33234000 7429900 25804000 18328 613 6904 7069 28690;28691 28691 IVIPNEESVVIYYK 14 1 0 Unmodified _IVIPNEESVVIYYK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.9629 2 833.458539 1664.90252 66907.29 0.78965 0.00065814 0.15019 0.00012518 0.93985 0.00078332 833.960031585042 837.465898403009 107.65 0.45859 107.65 107.44 107.9 0 130 32 7 0 0 0 0.00020966 1 67129 84.658 84.658 1 1.3053 1.2857 0 24304000 7897900 16406000 18329 1563 6905 7070 28692 28692 IVIPNEESVVIYYK 14 1 0 Unmodified _IVIPNEESVVIYYK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.4671 2 833.458539 1664.90252 NaN NaN NaN -0.17656 -0.00014716 NaN NaN NaN NaN 119.05 0.39615 119.05 118.83 119.23 -7.6294E-06 0 0 0 0.00040675 1 70376 79.693 64.721 1 NaN NaN 0 6889400 0 6889400 18330 1563 6905 7070 28693 28693 IVIPNEESVVIYYK 14 1 0 Unmodified _IVIPNEESVVIYYK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 837.9678 2 833.458539 1664.90252 NaN NaN NaN -0.57721 -0.00048108 NaN NaN NaN NaN 118.82 0.62136 118.82 118.61 119.23 0 0 0 0 5.0733E-06 1 69293 94.616 77.984 1 NaN NaN 0 9687000 0 9687000 18331 1563 6905 7070 28694 28694 IVITGDGDIDHDQALAQAIR 20 0 1 Unmodified _IVITGDGDIDHDQALAQAIR_ 0 0 0 Q59FD8;E9PII3;E9PK52;E9PHY5;O43491;E9PPC9;O60642;Q9UG62;Q6ZSX4;B4DJ76;Q6R5J7 Q59FD8 Q59FD8 EPB41L2;DKFZp564J1082 Band 4.1-like protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.3736 3 707.702675 2120.0862 NaN NaN NaN 0.30531 0.00021607 NaN NaN NaN NaN 90.855 0.53812 90.855 90.546 91.084 0 0 0 0 3.8323E-14 1 54915 98.165 81.285 1 NaN NaN 0 17915000 0 17915000 18332 1238 6906 7071 28695 28695 IVIWDFLTR 9 0 1 Unmodified _IVIWDFLTR_ 0 0 0 A0A024R9B5;B4DMM7;Q15291 A0A024R9B5 A0A024R9B5 RBBP5 Retinoblastoma-binding protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.8383 2 581.834591 1161.65463 81386.13 0.9839 0.00057247 -0.32069 -0.00018659 0.66322 0.00038588 581.834255161589 586.838490262305 127.36 0.5578 127.36 127.05 127.6 0 95 33 4 0 0 0 0.034216 1 82813 44.349 44.349 1 0.73947 0.78617 0 3721700 2193300 1528400 18333 272 6907 7072 28696 28696 IVIWDFLTR 9 0 1 Unmodified _IVIWDFLTR_ 0 0 0 A0A024R9B5;B4DMM7;Q15291 A0A024R9B5 A0A024R9B5 RBBP5 Retinoblastoma-binding protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.3419 2 581.834591 1161.65463 82409.66 0.93547 0.00054429 -0.063451 -3.6918E-05 0.87202 0.00050737 581.834363777137 586.838566721502 126.88 0.62614 126.88 126.57 127.19 0 123 38 5 0 0 0 0.0089883 1 84521 60.59 60.59 1 0.73174 0.74342 0 5353100 2577500 2775600 18334 272 6907 7072 28697 28697 IVKPNGEKPDEFESGISQALLELEMNSDLK 30 3 0 Oxidation (M) _IVKPNGEKPDEFESGISQALLELEM(ox)NSDLK_ IVKPNGEKPDEFESGISQALLELEM(1)NSDLK IVKPNGEKPDEFESGISQALLELEM(66.43)NSDLK 0 1 2 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.6747 4 837.423527 3345.665 64400.66 1.0814 0.00090558 -0.67857 -0.00056825 0.40281 0.00033733 837.924585103887 843.684684797398 134.24 0.47079 134.24 133.94 134.41 0 157 21 14 0 0 0 9.1612E-17 1 81879 66.432 64.15 1 0.56301 0.5273 0 42699000 26894000 15804000 18335 1631 6908 7073 28698 28698 1413 IVKPNGEKPDEFESGISQALLELEMNSDLK 30 3 0 Oxidation (M) _IVKPNGEKPDEFESGISQALLELEM(ox)NSDLK_ IVKPNGEKPDEFESGISQALLELEM(1)NSDLK IVKPNGEKPDEFESGISQALLELEM(53.27)NSDLK 0 1 2 P62081;B5MCP9 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 843.4357 4 837.423527 3345.665 65402.82 1.2182 0.0010201 -0.76018 -0.0006366 0.458 0.00038354 837.673645747769 843.684562163395 134.13 0.64723 134.13 133.67 134.32 0 180 32 13 0 0 0 2.8915E-11 3 80881 53.266 53.266 1 0.51032 0.50472 0 33258000 19058000 14199000 18336 1631 6908 7073 28699;28700;28701 28701 1413 IVLHPDTEHSK 11 1 0 Unmodified _IVLHPDTEHSK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 428.5656 3 425.894577 1274.6619 91607.13 -0.17113 -7.2884E-05 -0.072688 -3.0957E-05 -0.24382 -0.00010384 425.894540185863 428.565878012641 20.498 0.45079 20.498 20.393 20.844 -1.9073E-06 88 19 8 0 0 0 0.00054965 2 6984 51.841 41.789 1 1.0583 1.1481 0 45380000 17781000 27599000 18337 214 6909 7074 28702;28703 28703 IVLHPDTEHSK 11 1 0 Unmodified _IVLHPDTEHSK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.3455 2 638.338227 1274.6619 77830.7 0.39893 0.00025465 0.2183 0.00013935 0.61723 0.000394 638.338120645961 642.345393662917 20.514 0.27592 20.514 20.432 20.708 -1.9073E-06 35 12 5 0 0 0 1.8777E-05 1 6969 105.4 90.246 1 0.89224 0.89104 0 9729300 4189400 5540000 18338 214 6909 7074 28704 28704 IVLHPDTEHSK 11 1 0 Unmodified _IVLHPDTEHSK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.8943 3 425.894577 1274.6619 91817.03 -0.30894 -0.00013157 -0.060202 -2.564E-05 -0.36914 -0.00015721 425.894550064938 428.565995000949 20.027 0.36769 20.027 19.913 20.28 0 78 13 9 0 0 0 0.0014937 1 6330 50.275 40.223 1 0.95886 1.0776 0 56027000 29005000 27022000 18339 214 6909 7074 28705 28705 IVLHPDTEHSK 11 1 0 Unmodified _IVLHPDTEHSK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.338 2 638.338227 1274.6619 76066.82 0.29825 0.00019039 -0.42774 -0.00027304 -0.12949 -8.2659E-05 638.337967338085 642.345166893537 20.053 0.19902 20.053 19.934 20.133 0 37 7 7 0 0 0 1.8556E-12 2 6368 142.43 116.04 1 0.99798 1.0218 0 17516000 9077900 8438200 18340 214 6909 7074 28706;28707 28707 IVLHPDTEHSK 11 1 0 Unmodified _IVLHPDTEHSK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.3386 2 638.338227 1274.6619 75883.77 0.15597 9.9561E-05 0.25208 0.00016092 0.40805 0.00026048 638.338471562341 642.345525773291 21.503 0.26807 21.503 21.354 21.622 1.9073E-06 34 8 6 0 0 0 0.011983 2 6558 48.091 36.601 1 1.3209 1.1165 0 2082000 952140 1129900 18341 214 6909 7074 28708;28709 28709 IVLHPDTEHSK 11 1 0 Unmodified _IVLHPDTEHSK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 425.8946 3 425.894577 1274.6619 91199.98 -0.63391 -0.00026998 0.37402 0.00015929 -0.25989 -0.00011069 425.894753683534 428.566151735368 21.519 0.46491 21.519 21.354 21.819 0 69 15 8 0 0 0 0.06047 1 6552 14.18 11.142 1 1.1204 0.88598 0 10548000 4960100 5587500 18342 214 6909 7074 28710 28710 IVLHPDTEHSK 11 1 0 Unmodified _IVLHPDTEHSK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.3387 2 638.338227 1274.6619 76141.02 0.15786 0.00010077 0.36448 0.00023266 0.52233 0.00033343 638.338360792657 642.345497210171 21.216 0.32202 21.216 21.059 21.381 0 57 15 6 0 0 0 0.0054128 1 5892 56.258 52.958 1 1.2076 0.94218 0 2112400 953110 1159200 18343 214 6909 7074 28711 28711 IVLHPDTEHSK 11 1 0 Unmodified _IVLHPDTEHSK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;H7C5G8 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 428.5659 3 425.894577 1274.6619 92443.16 -0.82549 -0.00035157 0.74309 0.00031648 -0.082393 -3.5091E-05 425.894905368105 428.566234020313 21.203 0.32699 21.203 21.076 21.403 1.9073E-06 92 15 8 0 0 0 0.026476 1 5899 23.118 21.213 1 1.213 0.99241 0 8410500 3581400 4829000 18344 214 6909 7074 28712 28712 IVLLDSSLEYK 11 1 0 Unmodified _IVLLDSSLEYK_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368;Q5SZX6 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.8068 2 640.360836 1278.70712 80609.23 0.94554 0.00060549 -0.19891 -0.00012737 0.74663 0.00047812 640.360433632875 644.367952797108 98.832 0.63433 98.832 98.478 99.112 0 173 51 5 0 0 0 0.032986 1 60302 58.981 38.651 1 2.1062 2.1954 0 12285000 4838500 7446100 18345 951 6910 7075 28713 28713 IVLLDSSLEYK 11 1 0 Unmodified _IVLLDSSLEYK_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368;Q5SZX6 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.3682 2 640.360836 1278.70712 80314.8 0.73185 0.00046865 0.0077981 4.9936E-06 0.73965 0.00047364 640.360935770925 644.368018947974 98.017 0.59297 98.017 97.777 98.37 -7.6294E-06 160 52 7 0 0 0 0.0012773 1 61276 68.735 48.405 1 2.3177 2.3772 0 17691000 6446600 11244000 18346 951 6910 7075 28714 28714 IVLPTEK 7 1 0 Unmodified _IVLPTEK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 404.2567 2 400.249829 798.485105 94690.28 0.27722 0.00011096 0.076603 3.066E-05 0.35382 0.00014162 400.249816137588 404.256839101253 48.805 0.60588 48.805 48.288 48.894 3.8147E-06 174 45 5 0 0 0 0.020094 2 26538 94.407 37.897 1 0.98253 1.1087 0 134220000 68223000 65993000 18347 1813 6911 7076 28715;28716 28715 IVLPTEK 7 1 0 Unmodified _IVLPTEK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 404.2568 2 400.249829 798.485105 95677.69 -0.11782 -4.7158E-05 0.33861 0.00013553 0.22079 8.837E-05 400.249873114341 404.256910727179 47.686 0.70008 47.686 47.305 48.005 -3.8147E-06 246 48 7 0 0 0 0.017426 2 26465 97.068 40.557 1 0.90442 1.042 0 180620000 98995000 81621000 18348 1813 6911 7076 28717;28718 28717 IVLQIDNAR 9 0 1 Unmodified _IVLQIDNAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784;B4DE59 F8VZY9;CON__P05784;B4DE59 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.3062 2 521.306198 1040.59784 83276.2 0.37986 0.00019802 -0.54821 -0.00028579 -0.16836 -8.7765E-05 521.305824242644 526.310158594356 74.582 1.8763 74.582 74.25 76.127 0 654 134 9 0 0 0 0.0015989 5 39544 83.313 27.738 1 1.4905 1.2748 0 39405000 14415000 24990000 + 18349 316;1155;964 6912 7077 28719;28720;28721;28722;28723 28720 IVLQIDNAR 9 0 1 Unmodified _IVLQIDNAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784;B4DE59 F8VZY9;CON__P05784;B4DE59 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 526.3106 2 521.306198 1040.59784 82528.88 0.2204 0.0001149 -0.52952 -0.00027604 -0.30912 -0.00016114 521.305858638117 526.31013010425 74.889 1.9441 74.889 74.46 76.404 0 622 129 8 0 0 0 0.0064086 5 38842 64.265 28.384 1 1.4921 1.3015 0 36411000 13770000 22641000 + 18350 316;1155;964 6912 7077 28724;28725;28726;28727;28728 28724 IVLTNPVCTEVGEK 14 1 0 Unmodified _IVLTNPVCTEVGEK_ 0 0 0 P41091;Q2VIR3 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.9108 2 779.910898 1557.80724 68709.41 0.83598 0.00065199 0.28255 0.00022036 1.1185 0.00087236 779.911002098297 783.918163451695 82.271 0.79671 82.271 81.741 82.538 0 336 68 9 0 0 0 0.00022923 2 49062 65.179 65.179 1 1.9385 1.9087 0 24148000 10155000 13993000 18351 1559 6913 7078 28729;28730 28729 IVLTNPVCTEVGEK 14 1 0 Unmodified _IVLTNPVCTEVGEK_ 0 0 0 P41091;Q2VIR3 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.9185 2 779.910898 1557.80724 70082.92 0.78425 0.00061165 0.014188 1.1065E-05 0.79844 0.00062271 779.910548159711 783.917702146979 81.362 0.61424 81.362 80.947 81.561 0 306 52 9 0 0 0 6.5956E-05 2 49731 90.653 77.645 1 2.0167 2.1827 0 38700000 13680000 25020000 18352 1559 6913 7078 28731;28732 28732 IVLTNPVCTEVGEK 14 1 0 Unmodified _IVLTNPVCTEVGEK_ 0 0 0 P41091;Q2VIR3 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 779.9109 2 779.910898 1557.80724 70708.3 0.75586 0.00058951 -0.534 -0.00041647 0.22186 0.00017303 779.910624327599 783.917454656938 94.324 0.58942 94.324 93.986 94.575 0 170 35 7 0 0 0 0.0055956 2 52719 43.501 43.501 1 0.98791 0.76691 0 3454700 1459900 1994800 18353 1559 6913 7078 28733;28734 28734 IVLTNPVCTEVGEK 14 1 0 Unmodified _IVLTNPVCTEVGEK_ 0 0 0 P41091;Q2VIR3 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.9189 2 779.910898 1557.80724 69152.77 0.75385 0.00058794 -0.12169 -9.491E-05 0.63216 0.00049303 779.910787490023 783.917727520667 94.196 0.68275 94.196 93.819 94.502 0 186 43 7 0 0 0 0.0081729 2 51809 39.148 39.148 1 0.98947 0.79013 0 4119800 2096700 2023100 18354 1559 6913 7078 28735;28736 28735 IVPGQFLAVDPK 12 1 0 Unmodified _IVPGQFLAVDPK_ 0 0 0 A8K6V3;Q15393 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3794 2 642.371538 1282.72852 NaN NaN NaN -0.8872 -0.00056991 NaN NaN NaN NaN 96.7 0.71561 96.7 96.288 97.004 0 0 0 0 0.0029977 1 60176 66.595 45.132 1 NaN NaN 0 19232000 0 19232000 18355 764 6914 7079 28737 28737 IVPNVLLEQGK 11 1 0 Unmodified _IVPNVLLEQGK_ 0 0 0 B4DJV2;A0A024RB75;O75390;H0YIC4;Q0QEL2;A0A0C4DGI3;B3KTN4 B4DJV2 B4DJV2 CS Citrate synthase;Citrate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.3713 2 605.363713 1208.71287 80750.05 0.56489 0.00034196 0.34305 0.00020767 0.90794 0.00054963 605.36379221708 609.371016046187 83.178 0.39304 83.178 82.95 83.343 0 102 35 4 0 0 0 0.010084 1 49806 49.06 37.896 1 1.8231 1.8918 0 11340000 5181400 6158700 18356 326 6915 7080 28738 28738 IVPVEITISLLK 12 1 0 Unmodified _IVPVEITISLLK_ 0 0 0 Q5T0D2;B4DDL4;B2R6S5;P30085;B4DFW6 Q5T0D2 Q5T0D2 CMPK1;CMPK UMP-CMP kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.934 2 662.926146 1323.83774 NaN NaN NaN -0.049185 -3.2606E-05 NaN NaN NaN NaN 126.77 0.66695 126.77 126.5 127.17 0 0 0 0 0.0085972 1 84487 56.404 36.264 1 NaN NaN 0 10621000 0 10621000 18357 844 6916 7081 28739 28739 IVQAEGEAEAAK 12 1 0 Unmodified _IVQAEGEAEAAK_ 0 0 0 J3KPX7;Q99623;F5GY37 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.315 2 608.314417 1214.61428 76424.23 0.40139 0.00024417 0.37238 0.00022653 0.77377 0.0004707 608.31466433938 612.321642577094 22.934 0.54896 22.934 22.701 23.25 0 172 28 8 0 0 0 1.8516E-22 3 8845 150.61 109.16 1 1.747 2.0331 0 257970000 86209000 171760000 18358 1328 6917 7082 28740;28741;28742 28741 IVQAEGEAEAAK 12 1 0 Unmodified _IVQAEGEAEAAK_ 0 0 0 J3KPX7;Q99623;F5GY37 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.3149 2 608.314417 1214.61428 78401.35 0.2744 0.00016692 -0.02637 -1.6041E-05 0.24803 0.00015088 608.314633075446 612.321400448352 22.743 0.76379 22.743 22.46 23.224 0 213 32 11 0 0 0 1.1843E-17 2 8611 137.98 96.528 1 1.4766 1.7139 0 223960000 89484000 134480000 18359 1328 6917 7082 28743;28744 28744 IVQAEGEAEAAK 12 1 0 Unmodified _IVQAEGEAEAAK_ 0 0 0 J3KPX7;Q99623;F5GY37 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.3149 2 608.314417 1214.61428 77527.91 0.27987 0.00017025 -0.027731 -1.6869E-05 0.25214 0.00015338 608.314520839322 612.321591786072 25.56 0.5236 25.56 25.304 25.827 0 126 21 10 0 0 0 0.0006581 2 9307 67.726 31.783 1 2.5928 2.0324 0 16713000 4516200 12197000 18360 1328 6917 7082 28745;28746 28746 IVQAEGEAEAAK 12 1 0 Unmodified _IVQAEGEAEAAK_ 0 0 0 J3KPX7;Q99623;F5GY37 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.3217 2 608.314417 1214.61428 77499.84 0.48756 0.00029659 -0.37918 -0.00023066 0.10838 6.5927E-05 608.314164133246 612.321349901364 25.659 0.6163 25.659 25.363 25.979 0 130 25 10 0 0 0 4.62E-05 2 8877 98.943 94.002 1 2.7881 2.2397 0 17382000 4619600 12762000 18361 1328 6917 7082 28747;28748 28747 IVQMTEAEVR 10 0 1 Oxidation (M) _IVQM(ox)TEAEVR_ IVQM(1)TEAEVR IVQM(56.26)TEAEVR 0 1 0 V9HW04;P62140;C9J9S3;C9JP48 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.3097 2 596.305538 1190.59652 79366.75 0.37819 0.00022552 0.027476 1.6384E-05 0.40567 0.0002419 596.305592954791 601.309539276806 29.158 0.32713 29.158 28.989 29.316 0 108 25 5 0 0 0 0.0040223 1 11877 56.258 51.567 1 1.2761 1.0694 0 4045400 1666300 2379100 18362 1633 6918 7083 28749 28749 1414 IVQMTEAEVR 10 0 1 Oxidation (M) _IVQM(ox)TEAEVR_ IVQM(1)TEAEVR IVQM(51.95)TEAEVR 0 1 0 V9HW04;P62140;C9J9S3;C9JP48 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.3057 2 596.305538 1190.59652 79725.98 0.35219 0.00021001 0.034104 2.0336E-05 0.38629 0.00023035 596.305597170941 601.309607895101 29.451 0.40484 29.451 29.3 29.705 1.9073E-06 133 27 6 0 0 0 0.0055575 1 11973 51.949 46.168 1 1.3809 1.1537 0 3343100 1158200 2184900 18363 1633 6918 7083 28750 28750 1414 IVQMTEAEVR 10 0 1 Oxidation (M) _IVQM(ox)TEAEVR_ IVQM(1)TEAEVR IVQM(107.15)TEAEVR 0 1 0 V9HW04;P62140;C9J9S3;C9JP48 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.3099 2 596.305538 1190.59652 79016.49 0.23502 0.00014015 1.0061 0.00059996 1.2412 0.00074011 596.305451855664 601.309610264753 29.385 0.45722 29.385 29.157 29.614 0 142 26 9 0 0 0 3.6022E-06 1 11450 107.15 97.94 1 1.1824 1.0353 0 4196000 1765900 2430100 18364 1633 6918 7083 28751 28751 1414 IVQMTEAEVR 10 0 1 Oxidation (M) _IVQM(ox)TEAEVR_ IVQM(1)TEAEVR IVQM(44.32)TEAEVR 0 1 0 V9HW04;P62140;C9J9S3;C9JP48 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.3059 2 596.305538 1190.59652 78855.82 0.22972 0.00013699 0.32075 0.00019127 0.55048 0.00032825 596.305844147163 601.309831775892 29.683 0.45208 29.683 29.482 29.934 0 143 29 7 0 0 0 0.012708 1 11600 44.318 44.318 1 1.314 1.0902 0 5185100 2166100 3019000 18365 1633 6918 7083 28752 28752 1414 IVQMTEAEVR 10 0 1 Unmodified _IVQMTEAEVR_ 0 0 0 V9HW04;P62140;C9J9S3;C9JP48 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.3123 2 588.308081 1174.60161 NaN NaN NaN 0.53052 0.00031211 NaN NaN NaN NaN 56.793 0.81376 56.793 56.569 57.383 3.8147E-06 0 0 0 0.0001382 1 28079 93.178 29.613 1 NaN NaN 0 4932000 0 4932000 18366 1633 6918 7084 28753 28753 IVQVALNGLENILR 14 0 1 Unmodified _IVQVALNGLENILR_ 0 0 0 B4DII5;B4DWX3;O60684;O15131;Q5BKZ2;P52294;B3KXZ2;B3KWR2 B4DII5;Q5BKZ2 B4DII5 KPNA6;KPNA5;KPNA1 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-6;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.4723 2 776.46449 1550.91443 NaN NaN NaN 2.0394 0.0015835 NaN NaN NaN NaN 124.67 0.24582 124.67 124.49 124.74 0 0 0 0 4.876E-32 2 80980 155 123.07 1 NaN NaN 0 4306700 0 4306700 18367 980;1600 6919 7085 28754;28755 28755 IVQVALNGLENILR 14 0 1 Unmodified _IVQVALNGLENILR_ 0 0 0 B4DII5;B4DWX3;O60684;O15131;Q5BKZ2;P52294;B3KXZ2;B3KWR2 B4DII5;Q5BKZ2 B4DII5 KPNA6;KPNA5;KPNA1 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-6;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.4728 2 776.46449 1550.91443 70961.09 0.9643 0.00074875 1.1697 0.00090824 2.134 0.001657 776.965975456166 781.470529012477 124.28 0.50982 124.28 124.06 124.57 0 122 31 6 0 0 0 3.1413E-14 2 82582 127.83 118.4 1 1.0423 1.0297 0 15040000 6852700 8187400 18368 980;1600 6919 7085 28756;28757 28756 IVSGCPLPEACELYYVNR 18 0 1 Unmodified _IVSGCPLPEACELYYVNR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1071.0157 2 1070.51372 2139.0129 58360.11 0.31568 0.00033794 0.39228 0.00041994 0.70796 0.00075788 1071.01542716978 1076.02051713386 103.68 1.2896 103.68 102.91 104.2 0 589 106 9 0 0 0 1.16E-07 2 63922 88.021 82.942 1 0.95256 1.0553 0 63747000 29562000 34185000 18369 2023;1687 6920 7086 28758;28759 28758 IVSGCPLPEACELYYVNR 18 0 1 Unmodified _IVSGCPLPEACELYYVNR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1071.5161 2 1070.51372 2139.0129 58388.32 0.47488 0.00050837 0.45045 0.00048221 0.92533 0.00099058 1071.01577167237 1075.51950868206 103.07 1.3173 103.07 102.17 103.48 0 598 104 9 0 0 0 2.1192E-08 2 65096 111.79 111.79 1 1.0309 1.1761 0 94462000 52333000 42129000 18370 2023;1687 6920 7086 28760;28761 28760 IVSGCPLPEACELYYVNR 18 0 1 Unmodified _IVSGCPLPEACELYYVNR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1076.0199 2 1070.51372 2139.0129 57513.14 0.56272 0.0006024 -0.54904 -0.00058775 0.013682 1.4647E-05 1071.0149477792 1076.01897607448 115.53 0.73267 115.53 115.24 115.98 -7.6294E-06 284 33 12 0 0 0 4.6246E-06 3 67609 107.37 100 1 1.3178 1.1379 0 90525000 39064000 51461000 18371 2023;1687 6920 7086 28762;28763;28764 28764 IVSGCPLPEACELYYVNR 18 0 1 Unmodified _IVSGCPLPEACELYYVNR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1076.0197 2 1070.51372 2139.0129 57549.65 0.17949 0.00019215 -0.056657 -6.0652E-05 0.12284 0.0001315 1071.01548170308 1075.51820099399 115.36 0.69002 115.36 115.09 115.78 -7.6294E-06 266 32 12 0 0 0 1.5157E-11 2 66570 124.86 124.86 1 1.379 1.2034 0 72059000 28986000 43074000 18372 2023;1687 6920 7086 28765;28766 28766 IVSGEAESVEVTPENLQDFVGK 22 1 0 Unmodified _IVSGEAESVEVTPENLQDFVGK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;K7ERR6 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1178.5968 2 1174.08682 2346.15909 NaN NaN NaN 0.56365 0.00066177 NaN NaN NaN NaN 109.98 0.38247 109.98 109.84 110.22 -7.6294E-06 0 0 0 1.1867E-06 1 70744 64.798 54.998 1 NaN NaN 0 15212000 0 15212000 18373 946 6921 7087 28767 28767 IVSGEAESVEVTPENLQDFVGKPVFTVER 29 1 1 Unmodified _IVSGEAESVEVTPENLQDFVGKPVFTVER_ 0 0 1 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;K7ERR6 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1065.2202 3 1059.2101 3174.60847 NaN NaN NaN 0.068175 7.2212E-05 NaN NaN NaN NaN 117.86 0.31215 117.86 117.71 118.02 0 0 0 0 0.014999 1 77349 29.346 23.916 1 NaN NaN 0 14354000 0 14354000 18374 946 6922 7088 28768 28768 IVSGEAESVEVTPENLQDFVGKPVFTVER 29 1 1 Unmodified _IVSGEAESVEVTPENLQDFVGKPVFTVER_ 0 0 1 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;K7ERR6 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1065.8871 3 1059.2101 3174.60847 59450.66 0.24117 0.00025545 -0.10991 -0.00011641 0.13126 0.00013904 1059.87859408415 1065.5516788537 130.47 0.38397 130.47 130.27 130.66 0 131 20 10 0 0 0 0.045317 1 79020 13.805 13.805 1 1.9682 1.6538 0 7077800 2409600 4668300 18375 946 6922 7088 28769 28769 IVSLFAEHNDLQYAAPGGLIGVGTK 25 1 0 Unmodified _IVSLFAEHNDLQYAAPGGLIGVGTK_ 0 0 0 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.4585 3 857.458622 2569.35404 65204.22 0.72865 0.00062479 -0.084512 -7.2466E-05 0.64414 0.00055232 857.792861729239 860.464349446222 115.4 0.49855 115.4 115.14 115.64 -7.6294E-06 195 32 8 0 0 0 0.00017933 1 73402 34.914 34.914 1 1.7421 1.8214 0 30023000 11379000 18645000 18376 1559 6923 7089 28770 28770 IVSLFAEHNDLQYAAPGGLIGVGTK 25 1 0 Unmodified _IVSLFAEHNDLQYAAPGGLIGVGTK_ 0 0 0 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.7956 3 857.458622 2569.35404 65300.88 0.73056 0.00062643 -0.016739 -1.4353E-05 0.71382 0.00061208 857.458739555342 860.464287591237 114.75 0.51328 114.75 114.54 115.06 0 168 31 8 0 0 0 4.1175E-12 3 74633 63.115 63.115 1 1.8011 1.9282 0 37031000 13176000 23855000 18377 1559 6923 7089 28771;28772;28773 28773 IVSLFAEHNDLQYAAPGGLIGVGTK 25 1 0 Unmodified _IVSLFAEHNDLQYAAPGGLIGVGTK_ 0 0 0 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 857.7942 3 857.458622 2569.35404 65468.25 0.945 0.0008103 0.040228 3.4494E-05 0.98523 0.0008448 857.793067854682 860.46448340558 126.3 0.57486 126.3 126.13 126.7 0 112 19 11 0 0 0 0.00067716 1 76005 29.135 29.135 1 1.0515 0.83577 0 10025000 4865100 5160000 18378 1559 6923 7089 28774 28774 IVSSSDVGHDEYSTQSLVK 19 1 0 Unmodified _IVSSSDVGHDEYSTQSLVK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3418 3 684.335769 2049.98548 74411.19 0.60378 0.00041319 -0.088978 -6.0891E-05 0.5148 0.0003523 684.669692513544 687.007078088496 57.896 0.70666 57.896 57.572 58.278 -3.8147E-06 201 55 6 0 0 0 1.8212E-05 1 32729 49.188 45.21 1 1.599 1.6322 0 17838000 5619000 12219000 18379 415 6924 7090 28775 28775 IVSSSDVGHDEYSTQSLVK 19 1 0 Unmodified _IVSSSDVGHDEYSTQSLVK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.3423 3 684.335769 2049.98548 73736.92 0.66237 0.00045329 0.86039 0.00058879 1.5228 0.0010421 684.339044743945 687.341212707536 56.753 1.0512 56.753 56.104 57.155 3.8147E-06 246 77 7 0 0 0 3.1106E-05 1 32775 48.315 42.862 1 1.1121 1.1785 0 20336000 9889900 10446000 18380 415 6924 7090 28776 28776 IVSSSDVGHDEYSTQSLVK 19 1 0 Unmodified _IVSSSDVGHDEYSTQSLVK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.0075 3 684.335769 2049.98548 73390.15 0.55155 0.00037745 0.30987 0.00021206 0.86143 0.00058951 684.335841167096 687.341840879585 67.852 0.70786 67.852 67.474 68.182 0 188 47 8 0 0 0 0.0018549 1 35300 30.767 30.767 1 4.4149 3.4829 0 4078600 779130 3299500 18381 415 6924 7090 28777 28777 IVSSSDVGHDEYSTQSLVK 19 1 0 Unmodified _IVSSSDVGHDEYSTQSLVK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.0069 3 684.335769 2049.98548 73810.13 0.4719 0.00032294 0.55303 0.00037846 1.0249 0.0007014 684.337268390212 687.007391695211 68.428 0.54716 68.428 68.171 68.718 0 149 37 7 0 0 0 0.00014879 1 34876 40.349 40.349 1 3.6759 2.8622 0 3579700 984390 2595300 18382 415 6924 7090 28778 28778 IVTVSTGIK 9 1 0 Unmodified _IVTVSTGIK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2934 2 459.286943 916.559333 90935.39 0.37803 0.00017362 -0.48747 -0.00022389 -0.10944 -5.0265E-05 459.287266785279 463.293334863275 47.506 0.46663 47.506 47.217 47.683 3.8147E-06 98 31 5 0 0 0 0.023107 1 26421 48.794 27.112 1 1.6773 1.8459 0 42703000 16235000 26468000 18383 1795 6925 7091 28779 28779 IVVEFLQSNSDSTYEDLINK 20 1 0 Unmodified _IVVEFLQSNSDSTYEDLINK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;K7EP77 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1161.5837 2 1157.57609 2313.13762 56644.02 0.1091 0.00012629 0.73733 0.00085352 0.84643 0.00097981 1158.07828938352 1162.08554125322 117.52 0.36137 117.52 117.36 117.72 -7.6294E-06 92 24 7 0 0 0 0.00091113 3 75304 35.737 35.737 1 0.65821 0.65109 0 9434700 5856800 3577900 18384 222 6926 7092 28780;28781;28782 28782 IVVEFLQSNSDSTYEDLINK 20 1 0 Unmodified _IVVEFLQSNSDSTYEDLINK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;K7EP77 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1157.5747 2 1157.57609 2313.13762 57513.06 0.15576 0.0001803 0.48197 0.00055791 0.63772 0.00073821 1158.07942065821 1161.58409202181 117.1 0.38548 117.1 116.96 117.34 0 70 22 6 0 0 0 8.7426E-07 3 76712 79.466 79.466 1 0.62847 0.64417 0 9423900 4864600 4559300 18385 222 6926 7092 28783;28784;28785 28783 IVVEFLQSNSDSTYEDLINK 20 1 0 Unmodified _IVVEFLQSNSDSTYEDLINK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;K7EP77 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1161.5878 2 1157.57609 2313.13762 56149.75 0.10866 0.00012578 -0.00054172 -6.2708E-07 0.10811 0.00012515 1158.07685021282 1162.08508257722 129.39 0.42131 129.39 129.18 129.6 0 113 19 8 0 0 0 0.0035852 1 78187 31.215 26.414 1 0.95655 0.76831 0 7920800 4268300 3652500 18386 222 6926 7092 28786 28786 IVVEFLQSNSDSTYEDLINK 20 1 0 Unmodified _IVVEFLQSNSDSTYEDLINK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;K7EP77 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1158.037 2 1157.57609 2313.13762 56032.42 0.4744 0.00054915 -0.045311 -5.245E-05 0.42909 0.0004967 1158.07672766441 1161.58276225923 129.25 0.33818 129.25 129.1 129.43 0 76 15 8 0 0 0 0.04142 1 77325 31.389 31.389 1 0.85558 0.70312 0 9701200 5327900 4373300 18387 222 6926 7092 28787 28787 IVVFQYSDGK 10 1 0 Unmodified _IVVFQYSDGK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.3063 2 578.305864 1154.59717 80053.76 0.70318 0.00040665 0.15936 9.2161E-05 0.86254 0.00049881 578.306010974178 582.312986446783 71.823 1.0758 71.823 71.451 72.526 0 338 87 6 0 0 0 1.0508E-11 2 41896 138.1 92.38 1 0.73619 0.84123 0 181960000 109030000 72934000 18388 1770 6927 7093 28788;28789 28789 IVVFQYSDGK 10 1 0 Unmodified _IVVFQYSDGK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.306 2 578.305864 1154.59717 79305.32 0.70482 0.0004076 -0.21528 -0.00012449 0.48955 0.00028311 578.30579990663 582.312774841637 70.475 1.12 70.475 70.156 71.276 0 359 87 7 0 0 0 2.4826E-06 2 42092 110.87 76.064 1 0.71573 0.82664 0 194070000 109380000 84687000 18389 1770 6927 7093 28790;28791 28791 IVVFQYSDGK 10 1 0 Unmodified _IVVFQYSDGK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.3129 2 578.305864 1154.59717 80205.27 0.49296 0.00028508 -0.0058925 -3.4077E-06 0.48707 0.00028168 578.305969613996 582.312862044101 81.832 1.1763 81.832 81.45 82.626 0 295 69 7 0 0 0 0.011008 1 44290 52.579 40.532 1 1.2191 0.98986 0 27299000 11919000 15380000 18390 1770 6927 7093 28792 28792 IVVFQYSDGK 10 1 0 Unmodified _IVVFQYSDGK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.313 2 578.305864 1154.59717 80048.51 0.37574 0.00021729 -0.0052785 -3.0526E-06 0.37046 0.00021424 578.305995865757 582.312838351412 81.981 1.1377 81.981 81.65 82.787 0 270 66 6 0 0 0 0.0035438 1 43589 64.04 64.04 1 1.2072 0.9776 0 24171000 10977000 13193000 18391 1770 6927 7093 28793 28793 IVVLFYK 7 1 0 Unmodified _IVVLFYK_ 0 0 0 B5MCE7;B5MCH7;B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;E9PFD4;D3DN77;A0A024R3Z6;Q53FN7;Q7L1Q6 B5MCE7 B5MCE7 BZW2;hCG_2022736;BZW1 Basic leucine zipper and W2 domain-containing protein 2;Basic leucine zipper and W2 domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.2851 2 441.278389 880.542226 NaN NaN NaN -0.26054 -0.00011497 NaN NaN NaN NaN 93.387 0.29303 93.387 93.161 93.454 0 0 0 0 0.031635 1 56617 72.021 56.8 1 NaN NaN 0 5347600 0 5347600 18392 293 6928 7094 28794 28794 IVVLFYK 7 1 0 Unmodified _IVVLFYK_ 0 0 0 B5MCE7;B5MCH7;B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;E9PFD4;D3DN77;A0A024R3Z6;Q53FN7;Q7L1Q6 B5MCE7 B5MCE7 BZW2;hCG_2022736;BZW1 Basic leucine zipper and W2 domain-containing protein 2;Basic leucine zipper and W2 domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2778 2 441.278389 880.542226 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.445 1 92.445 91.945 92.945 0 0 0 0 0.034306 1 57286 72.021 37.197 1 18393 293 6928 7094 28795 28795 IVVNLTGR 8 0 1 Unmodified _IVVNLTGR_ 0 0 0 B2R4W8;P62244;I3L3P7;I3L246;H3BN98 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.2764 2 436.271627 870.528701 90457.09 -0.091058 -3.9726E-05 0.0039869 1.7394E-06 -0.087071 -3.7987E-05 436.271611375004 441.27563544101 59.101 1.1057 59.101 58.698 59.804 0 535 87 10 0 0 0 0.0049843 2 33505 91.9 30.871 1 0.76953 0.91333 0 754660000 406130000 348530000 18394 831 6929 7095 28796;28797 28796 IVVNLTGR 8 0 1 Unmodified _IVVNLTGR_ 0 0 0 B2R4W8;P62244;I3L3P7;I3L246;H3BN98 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.2713 2 436.271627 870.528701 91066.39 0.036081 1.5741E-05 -0.11708 -5.1079E-05 -0.081 -3.5338E-05 436.271556699675 441.275574746295 58.07 0.90088 58.07 57.696 58.596 0 441 70 10 0 0 0 0.0011443 2 33559 111.73 63.977 1 0.76947 0.89978 0 611490000 342490000 268990000 18395 831 6929 7095 28798;28799 28798 IVVNLTGR 8 0 1 Unmodified _IVVNLTGR_ 0 0 0 B2R4W8;P62244;I3L3P7;I3L246;H3BN98 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 441.2759 2 436.271627 870.528701 89078.49 -0.13067 -5.7006E-05 0.01605 7.0023E-06 -0.11462 -5.0004E-05 436.271678778912 441.275683706415 67.995 1.8016 67.995 67.633 69.434 0 611 125 10 0 0 0 0.010197 2 35389 72.789 14.622 1 1.0253 0.88556 0 95493000 45645000 49848000 18396 831 6929 7095 28800;28801 28800 IVVNLTGR 8 0 1 Unmodified _IVVNLTGR_ 0 0 0 B2R4W8;P62244;I3L3P7;I3L246;H3BN98 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 441.2758 2 436.271627 870.528701 89009.87 -0.097645 -4.26E-05 -0.017828 -7.7777E-06 -0.11547 -5.0377E-05 436.271664362192 441.275617934727 68.367 1.8575 68.367 67.993 69.851 0 501 131 7 0 0 0 0.02313 3 34796 56.721 13.807 1 1.0267 0.8962 0 97517000 46477000 51041000 18397 831 6929 7095 28802;28803;28804 28802 IVYLYTK 7 1 0 Unmodified _IVYLYTK_ 0 0 0 A0A024RDH8;P49207 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.2719 2 450.265479 898.516405 88729.17 0.17524 7.8906E-05 -0.079998 -3.602E-05 0.095246 4.2886E-05 450.265508371872 454.272311796594 57.676 2.1916 57.676 56.868 59.059 0 812 176 9 0 0 0 0.030163 2 32459 69.176 46.139 1 0.85855 1.027 0 857580000 471170000 386410000 18398 386 6930 7096 28805;28806 28805 IVYLYTK 7 1 0 Unmodified _IVYLYTK_ 0 0 0 A0A024RDH8;P49207 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.2726 2 450.265479 898.516405 89227.2 0.12165 5.4773E-05 -0.20391 -9.1814E-05 -0.082266 -3.7042E-05 450.265386572796 454.272274867872 56.557 1.8292 56.557 55.866 57.696 0 720 142 9 0 0 0 0.030326 2 32919 68.915 39.577 1 0.85355 1.0074 0 930730000 505370000 425360000 18399 386 6930 7096 28807;28808 28808 IVYLYTK 7 1 0 Unmodified _IVYLYTK_ 0 0 0 A0A024RDH8;P49207 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 907.538 1 899.523682 898.516405 63714.91 0.521 0.00046865 0.22993 0.00020682 0.75093 0.00067548 899.523759534334 907.53786010439 66.528 0.99055 66.528 66.012 67.002 0 249 56 6 0 0 0 0.060758 1 34566 70.912 46.408 1 0.95584 0.76205 0 9611700 4750200 4861500 18400 386 6930 7096 28809 28809 IVYLYTK 7 1 0 Unmodified _IVYLYTK_ 0 0 0 A0A024RDH8;P49207 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 454.2724 2 450.265479 898.516405 89318.73 -0.028689 -1.2918E-05 -0.024019 -1.0815E-05 -0.052708 -2.3733E-05 450.265468851215 454.272390775866 66.766 2.7081 66.766 66.01 68.718 0 777 181 10 0 0 0 0.045193 1 33742 57.281 31.723 1 1.0051 0.84442 0 49748000 24382000 25367000 18401 386 6930 7096 28810 28810 IVYPPQLPGEPR 12 0 1 Unmodified _IVYPPQLPGEPR_ 0 0 0 E7ESL0;J3KQY1;Q9NWU5 E7ESL0 E7ESL0 MRPL22 39S ribosomal protein L22, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.3858 2 683.379894 1364.74524 75082.7 0.70198 0.00047972 0.66298 0.00045307 1.365 0.00093279 683.380350223885 688.384584406216 86.245 0.78545 86.245 85.859 86.644 0 163 62 4 0 0 0 0.0043643 2 51907 53.683 39.476 1 0.95349 0.98743 0 20437000 9113500 11323000 18402 1222 6931 7097 28811;28812 28811 IVYPPQLPGEPR 12 0 1 Unmodified _IVYPPQLPGEPR_ 0 0 0 E7ESL0;J3KQY1;Q9NWU5 E7ESL0 E7ESL0 MRPL22 39S ribosomal protein L22, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.3806 2 683.379894 1364.74524 NaN NaN NaN 0.34015 0.00023245 NaN NaN NaN NaN 85.319 0.77668 85.319 84.981 85.757 0 0 0 0 0.043174 2 52682 42.718 32.008 1 NaN NaN 0 4832500 4832500 0 18403 1222 6931 7097 28813;28814 28814 IVYPPQLPGEPR 12 0 1 Unmodified _IVYPPQLPGEPR_ 0 0 0 E7ESL0;J3KQY1;Q9NWU5 E7ESL0 E7ESL0 MRPL22 39S ribosomal protein L22, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.3848 2 683.379894 1364.74524 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.253 1 85.253 84.753 85.753 0 0 0 0 0.015996 1 52440 53.683 33.896 1 18404 1222 6931 7097 28815 28815 IWATDDGR 8 0 1 Unmodified _IWATDDGR_ 0 0 0 Q8WWQ0;Q6RI45 Q8WWQ0;Q6RI45 Q8WWQ0 PHIP;BRWD3 PH-interacting protein;Bromodomain and WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.2248 2 467.224874 932.435195 91319.3 0.49706 0.00023224 -0.19182 -8.9624E-05 0.30524 0.00014262 467.224856484341 472.228700564287 31.023 0.81987 31.023 30.871 31.691 1.9073E-06 204 75 4 0 0 0 0.029249 1 15472 52.716 7.6347 1 0.73922 0.75271 0 30050000 16500000 13550000 18405 1942;1860 6932 7098 28816 28816 IWATDDGR 8 0 1 Unmodified _IWATDDGR_ 0 0 0 Q8WWQ0;Q6RI45 Q8WWQ0;Q6RI45 Q8WWQ0 PHIP;BRWD3 PH-interacting protein;Bromodomain and WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2248 2 467.224874 932.435195 90160.69 0.076003 3.551E-05 -0.031408 -1.4675E-05 0.044595 2.0836E-05 467.225016735688 472.228710155324 30.399 0.95071 30.399 30.247 31.197 0 238 80 4 0 0 0 0.010197 1 14994 72.789 16.242 1 0.66809 0.7387 0 41994000 24605000 17388000 18406 1942;1860 6932 7098 28817 28817 IWCFGPDGTGPNILTDITK 19 1 0 Unmodified _IWCFGPDGTGPNILTDITK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1057.5317 2 1053.02224 2104.02993 59903.94 0.92734 0.00097651 0.22799 0.00024008 1.1553 0.0012166 1053.5243523708 1057.53095046807 127.07 0.56593 127.07 126.83 127.39 0 170 31 9 0 0 0 4.9092E-08 2 82646 90.412 90.412 1 2.8612 3.1018 0 44592000 11900000 32692000 18407 1478 6933 7099 28818;28819 28818 IWCFGPDGTGPNILTDITK 19 1 0 Unmodified _IWCFGPDGTGPNILTDITK_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1053.5272 2 1053.02224 2104.02993 59619.07 0.86391 0.00090972 0.028918 3.0451E-05 0.89283 0.00094017 1053.52405723556 1057.0292819576 126.7 0.57728 126.7 126.46 127.04 7.6294E-06 205 35 9 0 0 0 6.3386E-06 3 84470 78.486 78.486 1 2.7769 3.0774 0 47001000 12862000 34139000 18408 1478 6933 7099 28820;28821;28822 28821 IWDLEGK 7 1 0 Unmodified _IWDLEGK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;H0YAM7;D6REE5;D6RF23;H0Y9P0 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7277 2 430.729261 859.443968 92591.49 -0.03513 -1.5131E-05 -0.47308 -0.00020377 -0.50821 -0.0002189 430.728662501347 434.736273075166 62.139 1.1097 62.139 61.49 62.599 0 425 103 7 0 0 0 0.030704 1 36303 68.312 7.6641 1 1.6652 1.8783 0 62866000 23962000 38903000 18409 1227 6934 7100 28823 28823 IWDLQGSEEPVFR 13 0 1 Unmodified _IWDLQGSEEPVFR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.3972 2 788.39373 1574.77291 67920.81 0.59204 0.00046676 -0.37836 -0.0002983 0.21369 0.00016847 788.392823728365 793.397882604643 103.97 0.81679 103.97 103.59 104.41 -7.6294E-06 314 65 6 0 0 0 0.00011207 3 64009 98.249 89.06 1 0.86674 0.89654 0 23384000 12733000 10652000 18410 1859 6935 7101 28824;28825;28826 28825 IWDLQGSEEPVFR 13 0 1 Unmodified _IWDLQGSEEPVFR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.8994 2 788.39373 1574.77291 68045.51 1.0495 0.00082744 -0.23777 -0.00018746 0.81175 0.00063998 788.392992420172 793.397730078975 115.5 0.90067 115.5 115.21 116.12 7.6294E-06 188 40 10 0 0 0 2.5981E-06 2 67578 109.42 95.756 1 1.3033 1.0731 0 11762000 4888500 6873200 18411 1859 6935 7101 28827;28828 28827 IWDLQGSEEPVFR 13 0 1 Unmodified _IWDLQGSEEPVFR_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.3975 2 788.39373 1574.77291 67037.34 0.80704 0.00063626 0.00021475 1.6931E-07 0.80725 0.00063643 788.393276582564 793.397825342157 115.35 0.69002 115.35 115.09 115.78 -7.6294E-06 176 32 9 0 0 0 7.9327E-05 2 66548 104.79 95.841 1 1.3326 1.0783 0 11668000 5392300 6275700 18412 1859 6935 7101 28829;28830 28829 IWDTASGQCLK 11 1 0 Unmodified _IWDTASGQCLK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.8177 2 639.810987 1277.60742 NaN NaN NaN 0.082251 5.2625E-05 NaN NaN NaN NaN 52.193 0.44094 52.193 52.127 52.568 0 0 0 0 2.379E-05 1 28984 102.61 84.297 1 NaN NaN 0 6792500 0 6792500 18413 1630 6936 7102 28831 28831 IWDTASGQCLK 11 1 0 Unmodified _IWDTASGQCLK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.8195 2 639.810987 1277.60742 77144.9 0.96378 0.00061664 0.45958 0.00029404 1.4234 0.00091068 639.811375840805 643.818582960948 50.904 0.36577 50.904 50.734 51.1 0 86 29 4 0 0 0 2.9784E-05 2 28776 101.11 82.793 1 0.71702 0.71647 0 15221000 8954800 6266000 18414 1630 6936 7102 28832;28833 28832 IWDTASGQCLK 11 1 0 Unmodified _IWDTASGQCLK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.8185 2 639.810987 1277.60742 75099.7 0.46788 0.00029935 0.87128 0.00055745 1.3392 0.00085681 640.814742425595 643.818250675723 60.029 0.58754 60.029 59.771 60.359 -3.8147E-06 142 31 6 0 0 0 0.008035 2 30578 51.528 40.698 1 1.7839 1.3853 0 3442300 978010 2464200 18415 1630 6936 7102 28834;28835 28834 IWDTASGQCLK 11 1 0 Unmodified _IWDTASGQCLK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.8188 2 639.810987 1277.60742 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.339 1 60.339 59.839 60.839 -3.8147E-06 0 0 0 0.011339 1 30211 57.55 35.779 1 18416 1630 6936 7102 28836 28836 IWGLDFGDCHK 11 1 0 Unmodified _IWGLDFGDCHK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.5474 3 449.876529 1346.60776 90541.24 0.49758 0.00022385 -0.304 -0.00013676 0.19358 8.7085E-05 449.876352361227 452.547796210248 91.258 0.63792 91.258 91 91.637 0 178 51 6 0 0 0 0.012605 2 55132 34.75 34.75 1 0.69659 0.71829 0 17324000 11976000 5347800 18417 1827 6937 7103 28837;28838 28837 IWGLDFGDCHK 11 1 0 Unmodified _IWGLDFGDCHK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.5476 3 449.876529 1346.60776 91963.8 0.21968 9.8829E-05 0.024364 1.0961E-05 0.24405 0.00010979 449.876427046335 452.547914142517 90.073 0.74203 90.073 89.611 90.353 0 175 65 4 0 0 0 0.0049517 2 55587 38.634 35.411 1 0.80973 0.80825 0 14992000 8476200 6516100 18418 1827 6937 7103 28839;28840 28840 IWGLDFGDCHK 11 1 0 Unmodified _IWGLDFGDCHK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 449.8766 3 449.876529 1346.60776 91802.47 0.12455 5.6031E-05 -0.041505 -1.8672E-05 0.083044 3.736E-05 449.876465004754 452.547872335148 103.26 0.52292 103.26 103.02 103.54 0 152 33 6 0 0 0 0.038736 2 58659 24.276 24.276 1 1.1214 0.87143 0 3419800 1670700 1749100 18419 1827 6937 7103 28841;28842 28842 IWIFDGPTGEGR 12 0 1 Unmodified _IWIFDGPTGEGR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3439 2 674.338227 1346.6619 74619.55 0.58002 0.00039113 0.060777 4.0984E-05 0.6408 0.00043211 674.338253299871 679.342604440452 103.99 1.07 103.99 103.58 104.65 0 448 87 7 0 0 0 0.00021273 2 64022 81.338 67.131 1 0.78012 0.84164 0 48247000 28310000 19937000 18420 486 6938 7104 28843;28844 28843 IWIFDGPTGEGR 12 0 1 Unmodified _IWIFDGPTGEGR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3427 2 674.338227 1346.6619 74578.17 0.62703 0.00042283 -0.059382 -4.0044E-05 0.56764 0.00038278 674.338196437686 679.342513389954 103.14 1.0673 103.14 102.84 103.91 0 402 87 6 0 0 0 0.00024189 2 65073 87.258 77.305 1 0.80165 0.93183 0 62924000 27524000 35400000 18421 486 6938 7104 28845;28846 28845 IWIFDGPTGEGR 12 0 1 Unmodified _IWIFDGPTGEGR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.338 2 674.338227 1346.6619 73509.52 0.95674 0.00064517 -0.092484 -6.2366E-05 0.86425 0.0005828 674.338000498338 679.342352171412 115.28 1.2596 115.28 114.95 116.21 0 243 57 8 0 0 0 0.00023876 2 67448 86.624 67.844 1 1.2568 1.0301 0 16737000 7208500 9528000 18422 486 6938 7104 28847;28848 28848 IWIFDGPTGEGR 12 0 1 Unmodified _IWIFDGPTGEGR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.3431 2 674.338227 1346.6619 74156.6 0.71701 0.00048351 0.17984 0.00012128 0.89686 0.00060479 674.338154099103 679.342619305834 115.16 0.89658 115.16 114.85 115.74 7.6294E-06 240 42 7 0 0 0 0.00065956 2 66394 67.704 57.332 1 1.2131 1.0008 0 14420000 6264700 8155000 18423 486 6938 7104 28849;28850 28849 IWLVPIDFDK 10 1 0 Unmodified _IWLVPIDFDK_ 0 0 0 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.3478 2 623.347532 1244.68051 NaN NaN NaN -0.6136 -0.00038248 NaN NaN NaN NaN 125.89 0.40243 125.89 125.71 126.11 -7.6294E-06 0 0 0 0.042278 1 81826 48.794 31.409 1 NaN NaN 0 1458800 1458800 0 18424 1822 6939 7105 28851 28851 IWLVPIDFDK 10 1 0 Unmodified _IWLVPIDFDK_ 0 0 0 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.3479 2 623.347532 1244.68051 81643.14 0.79022 0.00049258 -0.060244 -3.7553E-05 0.72997 0.00045503 623.849222934015 627.354154150323 125.51 0.39096 125.51 125.27 125.66 0 74 27 5 0 0 0 0.0022483 2 83560 69.954 69.954 1 0.41054 0.4541 0 1920200 1257700 662520 18425 1822 6939 7105 28852;28853 28852 IWNLTQR 7 0 1 Unmodified _IWNLTQR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.7661 2 465.761426 929.5083 88070.16 0.57645 0.00026849 -0.95994 -0.0004471 -0.38349 -0.00017862 465.760931565245 470.765370668209 60.474 0.54193 60.474 60.21 60.752 0 195 50 6 0 0 0 0.026871 2 34443 81.32 57.118 1 0.9267 0.94705 0 31317000 17704000 13613000 18426 402 6940 7106 28854;28855 28854 IWNLTQR 7 0 1 Unmodified _IWNLTQR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.7658 2 465.761426 929.5083 88615.79 0.078031 3.6344E-05 -0.16976 -7.9067E-05 -0.091727 -4.2723E-05 465.761185515768 470.765507045547 69.688 0.62693 69.688 69.325 69.952 7.6294E-06 175 53 4 0 0 0 0.030033 1 36469 69.383 69.383 1 1.3811 1.1789 0 5680600 2365100 3315500 18427 402 6940 7106 28856 28856 IWNNEDVNLDK 11 1 0 Unmodified _IWNNEDVNLDK_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.3306 2 680.330598 1358.64664 NaN NaN NaN 0.70744 0.0004813 NaN NaN NaN NaN 62.41 0.60136 62.41 62.069 62.67 3.8147E-06 0 0 0 0.0017076 1 35700 81.338 63.902 1 NaN NaN 0 26586000 26586000 0 18428 2042 6941 7107 28857 28857 IWNNEDVNLDK 11 1 0 Unmodified _IWNNEDVNLDK_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.33 2 680.330598 1358.64664 NaN NaN NaN 0.83667 0.00056921 NaN NaN NaN NaN 61.161 0.83631 61.161 60.866 61.703 3.8147E-06 0 0 0 4.0226E-05 1 35741 100.48 89.647 1 NaN NaN 0 21973000 21973000 0 18429 2042 6941 7107 28858 28858 IWSTVPTDEEDEMEESTNRPR 21 0 2 Unmodified _IWSTVPTDEEDEMEESTNRPR_ 0 0 1 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.0493 3 841.043097 2520.10746 65256.12 0.55007 0.00046263 -0.1057 -8.8896E-05 0.44437 0.00037373 841.377279735186 848.049320928413 84.193 0.43092 84.193 84.034 84.465 0 142 35 7 0 0 0 0.0016953 2 45987 29.636 29.636 1 1.4126 1.2155 0 5312700 2442900 2869800 18430 1792 6942 7108 28859;28860 28860 IWSTVPTDEEDEMEESTNRPR 21 0 2 Unmodified _IWSTVPTDEEDEMEESTNRPR_ 0 0 1 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 847.7156 3 841.043097 2520.10746 66539.27 0.7252 0.00060993 -0.33539 -0.00028208 0.38981 0.00032785 841.711598043034 847.715125126169 84.349 0.45617 84.349 84.163 84.619 0 140 33 7 0 0 0 0.0027895 2 45218 24.793 23.583 1 1.2309 1.1139 0 4288500 1899700 2388800 18431 1792 6942 7108 28861;28862 28862 IWSVPNASCVQVVR 14 0 1 Unmodified _IWSVPNASCVQVVR_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.9297 2 807.924674 1613.8348 68673.01 0.83344 0.00067336 -1.6845 -0.001361 -0.85109 -0.00068761 808.421876212635 812.92893741412 95.602 0.54951 95.602 95.374 95.924 -7.6294E-06 185 44 6 0 0 0 0.0073196 1 58124 40.589 34.486 1 0.97378 1.0043 0 14024000 6572000 7452100 18432 2114 6943 7109 28863 28863 IWSVPNASCVQVVR 14 0 1 Unmodified _IWSVPNASCVQVVR_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.4319 2 807.924674 1613.8348 69041.16 0.56766 0.00045863 -1.7514 -0.001415 -1.1837 -0.00095637 807.925047294007 812.928941018554 94.887 0.5639 94.887 94.602 95.166 7.6294E-06 200 47 6 0 0 0 0.017148 1 59075 34.755 31.11 1 0.82693 0.83401 0 19609000 9033400 10576000 18433 2114 6943 7109 28864 28864 IWSVPNASCVQVVR 14 0 1 Unmodified _IWSVPNASCVQVVR_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 808.4258 2 807.924674 1613.8348 69074.8 0.63533 0.0005133 -0.10056 -8.1249E-05 0.53476 0.00043205 807.924710961357 812.928847713021 108.76 0.42996 108.76 108.57 109 0 95 21 7 0 0 0 0.020225 2 61627 33.886 33.886 1 1.0844 0.95835 0 3704500 1871200 1833300 18434 2114 6943 7109 28865;28866 28865 IYADTFGDINYQEFAK 16 1 0 Unmodified _IYADTFGDINYQEFAK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 951.9567 2 947.946524 1893.87849 62890.73 1.0597 0.0010045 -0.27556 -0.00026122 0.78409 0.00074328 948.447400038758 951.953538497454 108.69 0.57988 108.69 108.45 109.03 7.6294E-06 238 39 9 0 0 0 1.4439E-12 3 67932 122.42 107.22 1 0.93786 1.0236 0 50463000 24641000 25821000 18435 794 6944 7110 28867;28868;28869 28868 IYADTFGDINYQEFAK 16 1 0 Unmodified _IYADTFGDINYQEFAK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 951.9539 2 947.946524 1893.87849 63590.04 0.62262 0.00059021 -0.37901 -0.00035928 0.24362 0.00023093 948.447385347348 951.953383103555 108.15 0.59821 108.15 107.9 108.5 0 262 42 8 0 0 0 6.8215E-13 2 69185 123.95 108.75 1 0.96447 1.0568 0 40889000 20604000 20285000 18436 794 6944 7110 28870;28871 28871 IYADTFGDINYQEFAK 16 1 0 Unmodified _IYADTFGDINYQEFAK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 948.4473 2 947.946524 1893.87849 61494.79 0.59166 0.00056086 -0.31944 -0.00030281 0.27222 0.00025805 947.945549731356 952.455148659064 119.6 0.51825 119.6 119.37 119.89 0 73 23 4 0 0 0 0.00035694 1 70008 52.576 41.67 1 0.96193 0.79094 0 9952600 4814700 5137900 18437 794 6944 7110 28872 28872 IYAGVGEFSFEEIR 14 0 1 Unmodified _IYAGVGEFSFEEIR_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 809.403 2 808.901388 1615.78822 NaN NaN NaN -0.4923 -0.00039823 NaN NaN NaN NaN 122.42 0.36473 122.42 122.24 122.61 -7.6294E-06 0 0 0 0.014936 1 72084 48.741 38.217 1 NaN NaN 0 879960 879960 0 18438 1396 6945 7111 28873 28873 IYAPEAPYTSPDK 13 1 0 Unmodified _IYAPEAPYTSPDK_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.3568 2 726.356282 1450.69801 NaN NaN NaN 0.33277 0.00024171 NaN NaN NaN NaN 71.298 0.44942 71.298 71.041 71.49 -7.6294E-06 0 0 0 0.044968 1 37522 40.727 35.414 1 NaN NaN 0 1938800 1938800 0 18439 2069 6946 7112 28874 28874 IYAPEAPYTSPDK 13 1 0 Unmodified _IYAPEAPYTSPDK_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 726.3558 2 726.356282 1450.69801 72092.85 0.2042 0.00014832 0.92786 0.00067396 1.1321 0.00082228 726.356443922493 730.364450219694 71.812 0.44921 71.812 71.593 72.043 0 146 31 7 0 0 0 0.010153 1 37135 42.001 42.001 1 0.54764 0.43697 0 2408000 1396300 1011700 18440 2069 6946 7112 28875 28875 IYDLNKPEAEPK 12 2 0 Unmodified _IYDLNKPEAEPK_ 0 0 1 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2604 3 472.917158 1415.72965 NaN NaN NaN 0.041163 1.9467E-05 NaN NaN NaN NaN 37.382 0.50885 37.382 37.122 37.631 0 0 0 0 0.013837 1 18938 53.448 40.821 1 NaN NaN 0 47210000 0 47210000 18441 2136 6947 7113 28876 28876 IYDLNKPEAEPK 12 2 0 Unmodified _IYDLNKPEAEPK_ 0 0 1 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.8862 2 708.872099 1415.72965 NaN NaN NaN 0.48806 0.00034597 NaN NaN NaN NaN 37.277 0.16639 37.277 37.17 37.336 0 0 0 0 0.01389 2 18988 82.171 63.859 1 NaN NaN 0 12432000 0 12432000 18442 2136 6947 7113 28877;28878 28878 IYDLNKPEAEPK 12 2 0 Unmodified _IYDLNKPEAEPK_ 0 0 1 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.8868 2 708.872099 1415.72965 NaN NaN NaN 0.028752 2.0382E-05 NaN NaN NaN NaN 36.182 0.25964 36.182 36.061 36.32 0 0 0 0 5.1916E-27 1 18536 143.96 93.92 1 NaN NaN 0 15549000 0 15549000 18443 2136 6947 7113 28879 28879 IYDLNKPEAEPK 12 2 0 Unmodified _IYDLNKPEAEPK_ 0 0 1 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.26 3 472.917158 1415.72965 87868.02 0.17703 8.3721E-05 -0.16771 -7.9312E-05 0.0093236 4.4093E-06 472.917065805662 478.259759248067 42.96 0.63134 42.96 42.728 43.359 0 132 40 6 0 0 0 0.04972 1 20210 19.058 19.058 1 3.3269 2.9006 0 3171600 754270 2417300 18444 2136 6947 7113 28880 28880 IYEISNR 7 0 1 Unmodified _IYEISNR_ 0 0 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 452.7415 2 447.737617 893.460681 91220.23 -0.093328 -4.1787E-05 0.17328 7.7584E-05 0.079952 3.5798E-05 447.737745359421 452.741640078262 35.738 0.47648 35.738 35.559 36.035 0 138 37 5 0 0 0 0.044039 1 15936 57.811 26.232 1 1.0631 0.8882 0 3359100 1467400 1891700 18445 1676 6948 7114 28881 28881 IYEYVESR 8 0 1 Unmodified _IYEYVESR_ 0 0 0 B4DWW8;E7EVX8;Q8WWY3;E7EU94;E7ESX0;E7EN72 B4DWW8 B4DWW8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.7614 2 529.761289 1057.50803 86631.02 0.50017 0.00026497 -0.025358 -1.3434E-05 0.47481 0.00025154 529.76117727576 534.765292056112 40.387 0.28279 40.387 40.226 40.509 0 88 24 5 0 0 0 0.013465 1 21134 65.252 39.515 1 1.1306 1.1544 0 18822000 6471200 12351000 18446 1046 6949 7115 28882 28882 IYGETPEACR 10 0 1 Unmodified _IYGETPEACR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.274 2 598.274238 1194.53392 79433.03 0.66646 0.00039873 0.28818 0.00017241 0.95465 0.00057114 598.274399421447 603.278234670808 28.331 0.27134 28.331 28.183 28.454 -1.9073E-06 70 18 6 0 0 0 0.0010045 2 13332 77.732 70.164 1 1.4217 1.43 0 17372000 6954300 10418000 18447 1593 6950 7116 28883;28884 28884 IYGETPEACR 10 0 1 Unmodified _IYGETPEACR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.2789 2 598.274238 1194.53392 77470.88 0.30498 0.00018246 0.65754 0.00039339 0.96252 0.00057585 598.274483698945 603.278233033297 27.653 0.34957 27.653 27.539 27.889 -1.9073E-06 57 18 5 0 0 0 1.5655E-05 2 12938 100.98 84.208 1 1.556 1.6869 0 27709000 12021000 15689000 18448 1593 6950 7116 28885;28886 28885 IYGETPEACR 10 0 1 Unmodified _IYGETPEACR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.2792 2 598.274238 1194.53392 79577.34 0.31298 0.00018725 0.32909 0.00019689 0.64207 0.00038414 598.27455535577 603.278587477683 32.274 0.31298 32.274 32.09 32.403 -3.8147E-06 62 14 6 0 0 0 0.0032316 2 13840 65.465 59.362 1 1.5816 1.3324 0 4650600 2109700 2540800 18449 1593 6950 7116 28887;28888 28887 IYGETPEACR 10 0 1 Unmodified _IYGETPEACR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.2748 2 598.274238 1194.53392 78180.32 0.57857 0.00034614 0.069912 4.1826E-05 0.64848 0.00038797 598.274507551073 603.278464358927 32.448 0.32948 32.448 32.308 32.637 0 72 16 8 0 0 0 0.0096567 2 13513 54.416 44.829 1 1.4191 1.1788 0 5057900 2208800 2849100 18450 1593 6950 7116 28889;28890 28890 IYGFYDECK 9 1 0 Unmodified _IYGFYDECK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;H0Y3Y6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.7678 2 597.760432 1193.50631 76445.53 0.42907 0.00025648 -0.045137 -2.6981E-05 0.38393 0.0002295 597.760404720161 601.767448436226 64.876 1.2433 64.876 64.431 65.675 0 571 112 8 0 0 0 0.0016226 2 37167 83.005 81.51 1 1.2063 1.3628 0 106600000 46790000 59814000 18451 1632;343;1633 6951 7117 28891;28892 28891 IYGFYDECK 9 1 0 Unmodified _IYGFYDECK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;H0Y3Y6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.7676 2 597.760432 1193.50631 75745.43 0.58969 0.00035249 -0.093976 -5.6175E-05 0.49571 0.00029632 597.760392774394 601.767541211226 63.745 1.1927 63.745 63.277 64.469 0 534 107 8 0 0 0 0.0018606 3 37272 79.906 79.906 1 1.221 1.3702 0 115120000 55189000 59934000 18452 1632;343;1633 6951 7117 28893;28894;28895 28893 IYGFYDECK 9 1 0 Unmodified _IYGFYDECK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;H0Y3Y6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.7677 2 597.760432 1193.50631 77608.49 0.64531 0.00038574 -0.087669 -5.2405E-05 0.55764 0.00033333 597.760514401097 601.767482344975 74.404 1.5333 74.404 73.827 75.361 7.6294E-06 578 107 9 0 0 0 0.0049382 2 39373 67.993 67.017 1 2.3206 1.8806 0 24765000 7768600 16996000 18453 1632;343;1633 6951 7117 28896;28897 28896 IYGFYDECK 9 1 0 Unmodified _IYGFYDECK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;H0Y3Y6;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.7676 2 597.760432 1193.50631 76369.39 0.51136 0.00030567 -0.057254 -3.4224E-05 0.4541 0.00027144 597.760487064457 601.767474620714 74.857 1.316 74.857 74.291 75.608 0 462 86 8 0 0 0 0.0043049 3 38766 69.598 69.598 1 2.322 1.861 0 19666000 5769600 13897000 18454 1632;343;1633 6951 7117 28898;28899;28900 28898 IYGISFPDPK 10 1 0 Unmodified _IYGISFPDPK_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.8109 2 568.802957 1135.59136 85076.41 0.72263 0.00041103 0.14018 7.9732E-05 0.86281 0.00049077 568.802684110205 572.810036263611 97.474 0.64615 97.474 97.191 97.838 7.6294E-06 170 50 6 0 0 0 0.0010607 2 60868 76.827 76.827 1 2.6401 2.7477 0 19021000 5474200 13547000 18455 892 6952 7118 28901;28902 28902 IYGISFPDPK 10 1 0 Unmodified _IYGISFPDPK_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.8031 2 568.802957 1135.59136 82284.18 0.76285 0.00043391 -0.14928 -8.4909E-05 0.61357 0.000349 568.802550059451 572.810089213346 111.09 0.40934 111.09 110.89 111.3 0 51 17 4 0 0 0 0.016374 1 64320 48.283 48.283 1 1.2661 1.0634 0 1605500 670700 934810 18456 892 6952 7118 28903 28903 IYGISFPDPK 10 1 0 Unmodified _IYGISFPDPK_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.8099 2 568.802957 1135.59136 82912.63 0.59684 0.00033949 -0.16697 -9.4971E-05 0.42988 0.00024451 568.802569429769 572.809853005869 110.98 0.44613 110.98 110.76 111.21 0 54 22 4 0 0 0 0.04172 1 63296 38.086 38.086 1 1.3696 1.1967 0 1318600 595020 723630 18457 892 6952 7118 28904 28904 IYGLGSLALYEK 12 1 0 Unmodified _IYGLGSLALYEK_ 0 0 0 B4DFE6;B4DL14;Q8TAS0;P36542 B4DFE6 B4DFE6 ATP5C1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3768 2 663.868828 1325.7231 77952.5 0.79115 0.00052522 -1.779 -0.001181 -0.9878 -0.00065577 663.868328237514 667.874216469165 107.65 0.45892 107.65 107.43 107.89 -7.6294E-06 71 32 4 0 0 0 0.0010242 1 67158 62.303 31.229 1 1.2793 1.2956 0 6725900 3551000 3174900 18458 969 6953 7119 28905 28905 IYHTIAYLTPLPQPNR 16 0 1 Unmodified _IYHTIAYLTPLPQPNR_ 0 0 0 Q6LET6;A0A024RAX2;P10620;F5H760 Q6LET6 Q6LET6 MGST1 Microsomal glutathione S-transferase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.0181 3 633.015866 1896.02577 NaN NaN NaN 0.53421 0.00033816 NaN NaN NaN NaN 91.993 0.20852 91.993 91.897 92.106 0 0 0 0 0.010036 1 56925 38.376 30.076 1 NaN NaN 0 3639400 3639400 0 18459 315 6954 7120 28906 28906 IYLILEYAPR 10 0 1 Unmodified _IYLILEYAPR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.8658 2 625.860806 1249.70706 77021.63 0.82866 0.00051863 -0.21232 -0.00013288 0.61635 0.00038575 625.860651589092 630.864916821112 113.83 0.9362 113.83 113.46 114.4 0 378 67 8 0 0 0 0.00084902 2 72471 80.239 80.239 1 1.0271 1.1208 0 51805000 23961000 27844000 18460 881;1967 6955 7121 28907;28908 28908 IYLILEYAPR 10 0 1 Unmodified _IYLILEYAPR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.8651 2 625.860806 1249.70706 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.48 1 113.48 112.98 113.98 0 0 0 0 0.00051495 1 71836 71.223 52.911 1 18461 881;1967 6955 7121 28909 28909 IYLILEYAPR 10 0 1 Unmodified _IYLILEYAPR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8659 2 625.860806 1249.70706 76591.11 0.69526 0.00043514 -0.16501 -0.00010327 0.53025 0.00033186 625.860749925704 630.864827105324 113.15 1.0459 113.15 112.72 113.77 0 399 71 9 0 0 0 7.0205E-06 3 73077 107.47 107.47 1 1.02 1.1693 0 82568000 41934000 40634000 18462 881;1967 6955 7121 28910;28911;28912 28910 IYLILEYAPR 10 0 1 Unmodified _IYLILEYAPR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.8659 2 625.860806 1249.70706 76714.02 0.72507 0.00045379 0.13583 8.5011E-05 0.8609 0.00053881 625.860827868237 630.864969508305 124.93 1.823 124.93 124.57 126.4 7.6294E-06 323 76 9 0 0 0 0.00021583 2 74804 93.551 93.551 1 2.0152 1.6931 0 26595000 9159200 17436000 18463 881;1967 6955 7121 28913;28914 28913 IYLILEYAPR 10 0 1 Unmodified _IYLILEYAPR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.8658 2 625.860806 1249.70706 76757.77 0.76126 0.00047644 0.19211 0.00012023 0.95337 0.00059667 625.860911883689 630.864977506882 124.79 1.4496 124.79 124.37 125.82 0 346 66 9 0 0 0 0.00021583 3 73774 93.551 93.551 1 1.9743 1.7108 0 23639000 8734400 14905000 18464 881;1967 6955 7121 28915;28916;28917 28915 IYLPPEASSQR 11 0 1 Unmodified _IYLPPEASSQR_ 0 0 0 Q6P0N0;G5E9K5;C9J2Q8 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.8334 2 630.832777 1259.651 81163.68 0.5401 0.00034072 0.71813 0.00045302 1.2582 0.00079373 630.832734679981 635.837568098831 67.301 0.95677 67.301 66.746 67.703 0 245 68 6 0 0 0 0.038119 1 35026 36.334 36.334 1 1.7204 1.492 0 2097500 877730 1219800 18465 1849 6956 7122 28918 28918 IYLPPEASSQR 11 0 1 Unmodified _IYLPPEASSQR_ 0 0 0 Q6P0N0;G5E9K5;C9J2Q8 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.8371 2 630.832777 1259.651 77618.12 0.50742 0.0003201 0.32475 0.00020487 0.83218 0.00052497 630.832851116659 635.837231346079 67.782 0.97526 67.782 67.268 68.243 0 225 69 5 0 0 0 0.035505 1 34491 36.693 33.581 1 1.6464 1.4706 0 2318700 758980 1559800 18466 1849 6956 7122 28919 28919 IYLTADNLVLNLQDESFTR 19 0 1 Unmodified _IYLTADNLVLNLQDESFTR_ 0 0 0 J3KPX7;Q99623;Q9BXV3 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1118.5829 2 1113.07606 2224.13756 58260.23 0.40067 0.00044598 -0.057848 -6.4389E-05 0.34283 0.00038159 1113.57747677382 1118.58148598716 125.86 0.77586 125.86 125.55 126.33 0 415 55 12 0 0 0 5.0657E-30 3 81744 139.3 139.3 1 1.4651 1.6847 0 143710000 58926000 84783000 18467 1328 6957 7123 28920;28921;28922 28922 IYLTADNLVLNLQDESFTR 19 0 1 Unmodified _IYLTADNLVLNLQDESFTR_ 0 0 0 J3KPX7;Q99623;Q9BXV3 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1118.5808 2 1113.07606 2224.13756 58299.54 0.34048 0.00037898 1.8165 0.0020219 2.157 0.0024009 1113.57777376422 1118.58197146869 126.37 0.19745 126.37 126.29 126.49 -7.6294E-06 35 15 5 0 0 0 0.017685 1 82290 35.204 35.204 1 1.0972 1.1144 0 7549100 2965600 4583500 18468 1328 6957 7123 28923 28923 IYLTADNLVLNLQDESFTR 19 0 1 Unmodified _IYLTADNLVLNLQDESFTR_ 0 0 0 J3KPX7;Q99623;Q9BXV3 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1118.582 2 1113.07606 2224.13756 58077.49 0.36587 0.00040725 0.099454 0.0001107 0.46533 0.00051795 1113.57772185633 1118.58163136651 125.46 0.65451 125.46 125.21 125.86 0 351 44 12 0 0 0 1.9859E-51 3 83492 173.06 173.06 1 1.4808 1.6978 0 177270000 68955000 108320000 18469 1328 6957 7123 28924;28925;28926 28926 IYLTADNLVLNLQDESFTR 19 0 1 Unmodified _IYLTADNLVLNLQDESFTR_ 0 0 0 J3KPX7;Q99623;Q9BXV3 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1118.5823 2 1113.07606 2224.13756 57359.5 0.19173 0.00021342 0.30253 0.00033674 0.49427 0.00055016 1113.57851793961 1118.58188346564 134.68 0.27393 134.68 134.53 134.8 0 29 6 9 0 0 0 2.1729E-159 2 82344 256.57 256.57 1 2.4479 2.1093 0 64962000 20640000 44322000 18470 1328 6957 7123 28927;28928 28927 IYLTADNLVLNLQDESFTR 19 0 1 Unmodified _IYLTADNLVLNLQDESFTR_ 0 0 0 J3KPX7;Q99623;Q9BXV3 J3KPX7 J3KPX7 PHB2 Prohibitin-2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1118.583 2 1113.07606 2224.13756 NaN NaN NaN 0.6191 0.0006891 NaN NaN NaN NaN 134.63 0.20642 134.63 134.5 134.71 0 0 0 0 1.546E-41 1 81420 150.34 128.28 1 NaN NaN 0 44173000 0 44173000 18471 1328 6957 7123 28929 28929 IYNISGNGSPLADSK 15 1 0 Unmodified _IYNISGNGSPLADSK_ 0 0 0 Q53HL2 Q53HL2 Q53HL2 CDCA8 Borealin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.3967 2 768.388645 1534.76274 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.806 1 66.806 66.306 67.306 0 0 0 0 0.0013518 1 39512 72.705 52.401 1 18472 1789 6958 7124 28930 28930 IYNSIYIGSQDALIAHYPR 19 0 1 Unmodified _IYNSIYIGSQDALIAHYPR_ 0 0 0 O75533;Q9NTB4 O75533 O75533 SF3B1;DKFZp434M052 Splicing factor 3B subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.3821 3 732.047894 2193.12185 73098.98 0.956 0.00069984 0.31743 0.00023237 1.2734 0.00093221 732.382902983377 735.718496925199 112.34 0.44495 112.34 112.15 112.59 0 69 24 5 0 0 0 0.039225 1 65238 14.928 14.928 1 0.47663 0.4077 0 2757000 1801600 955420 18473 1408 6959 7125 28931 28931 IYPDPELEVQVLGLPIR 17 0 1 Unmodified _IYPDPELEVQVLGLPIR_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A0C4DFM9;B4DUU9;F6SA91;J9JIG0 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.0549 2 976.048583 1950.08261 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.88 1 131.88 131.38 132.38 0 0 0 0 0.0002106 1 86110 76.522 53.605 1 18474 11 6960 7126 28932 28932 IYPDPELEVQVLGLPIR 17 0 1 Unmodified _IYPDPELEVQVLGLPIR_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A0C4DFM9;B4DUU9;F6SA91;J9JIG0 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 976.0486 2 976.048583 1950.08261 67572.66 0.73629 0.00071866 2.3431 0.002287 3.0794 0.0030056 976.550881018207 981.05699531565 131.46 0.25885 131.46 131.3 131.56 0 58 20 6 0 0 0 5.5299E-05 3 87947 76.655 76.655 1 0.987 1.0007 0 5430900 2060800 3370100 18475 11 6960 7126 28933;28934;28935 28933 IYPSEFGK 8 1 0 Unmodified _IYPSEFGK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.7422 2 470.742368 939.470183 NaN NaN NaN 0.24328 0.00011452 NaN NaN NaN NaN 45.611 0.68934 45.611 45.31 45.999 0 0 0 0 0.051567 1 25062 49.325 37.42 1 NaN NaN 0 15542000 15542000 0 18476 2033 6961 7127 28936 28936 IYPTFLHLHGK 11 1 0 Unmodified _IYPTFLHLHGK_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.5836 3 442.583674 1324.72919 92909.51 -0.054901 -2.4298E-05 -0.11368 -5.0313E-05 -0.16858 -7.4611E-05 442.583658677081 445.254735561747 66 1.1727 66 65.463 66.636 0 309 98 4 0 0 0 0.0090646 3 38735 39.179 38.021 1 0.7283 0.77479 0 23307000 10377000 12930000 18477 167 6962 7128 28937;28938;28939 28937 IYPTFLHLHGK 11 1 0 Unmodified _IYPTFLHLHGK_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 445.255 3 442.583674 1324.72919 90566.2 -0.037952 -1.6797E-05 0.22098 9.7802E-05 0.18303 8.1005E-05 442.583785412109 445.255077535951 75.978 1.2681 75.978 75.723 76.992 0 418 86 7 0 0 0 0.022721 2 40392 31.597 31.597 1 1.0084 0.81856 0 26922000 13744000 13178000 18478 167 6962 7128 28940;28941 28940 IYPTFLHLHGK 11 1 0 Unmodified _IYPTFLHLHGK_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.3794 2 663.371872 1324.72919 78065.45 0.56023 0.00037164 -0.044322 -2.9402E-05 0.51591 0.00034224 663.371558724626 667.378917187659 75.986 0.34649 75.986 75.808 76.155 0 82 23 6 0 0 0 0.0064337 1 40456 54.416 49.965 1 0.99767 0.84284 0 1970800 981050 989800 18479 167 6962 7128 28942 28942 IYPTFLHLHGK 11 1 0 Unmodified _IYPTFLHLHGK_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 442.5834 3 442.583674 1324.72919 90639.31 -0.013952 -6.1747E-06 0.036923 1.6341E-05 0.022971 1.0167E-05 442.583647165494 445.255051403384 75.704 1.1289 75.704 75.447 76.576 0 399 78 7 0 0 0 0.019192 1 39430 32.999 32.999 1 0.92137 0.73763 0 21588000 11100000 10488000 18480 167 6962 7128 28943 28943 IYQDAYR 7 0 1 Unmodified _IYQDAYR_ 0 0 0 H7BYN3;Q6LES8;E5KSX8;E5KSU5;Q00059 H7BYN3 H7BYN3 TFAM Transcription factor A, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.7297 2 464.729792 927.445031 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.79 1 24.79 24.29 25.29 0 0 0 0 0.019065 1 10488 99.384 73.275 1 18481 1209 6963 7129 28944 28944 IYQDAYR 7 0 1 Unmodified _IYQDAYR_ 0 0 0 H7BYN3;Q6LES8;E5KSX8;E5KSU5;Q00059 H7BYN3 H7BYN3 TFAM Transcription factor A, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 469.7338 2 464.729792 927.445031 89682.14 0.27322 0.00012697 0.06746 3.1351E-05 0.34068 0.00015833 464.7297640682 469.733868867603 27.629 0.57759 27.629 27.397 27.974 0 97 21 7 0 0 0 0.029479 2 10804 70.268 52.882 1 1.5133 1.2952 0 5971900 2266800 3705100 18482 1209 6963 7129 28945;28946 28945 IYQIYEGTSQIQR 13 0 1 Unmodified _IYQIYEGTSQIQR_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;B4DJE7 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.9185 2 799.912287 1597.81002 68200.77 0.54205 0.00043359 -0.48314 -0.00038647 0.058912 4.7125E-05 800.412551725286 804.916304259373 69.896 0.97765 69.896 69.609 70.587 0 268 87 5 0 0 0 9.7744E-24 4 40577 157.78 120.59 1 1.0329 1.0556 0 31321000 21962000 9358400 18483 545 6964 7130 28947;28948;28949;28950 28948 IYQIYEGTSQIQR 13 0 1 Unmodified _IYQIYEGTSQIQR_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;B4DJE7 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.9162 2 799.912287 1597.81002 68800.92 0.66452 0.00053156 0.34103 0.0002728 1.0056 0.00080435 799.912289193047 804.916652774575 68.814 0.59101 68.814 68.557 69.148 0 181 51 5 0 0 0 1.7614E-09 1 40807 123.51 94.555 1 2.7767 2.937 0 23616000 6172900 17443000 18484 545 6964 7130 28951 28951 IYQIYEGTSQIQR 13 0 1 Unmodified _IYQIYEGTSQIQR_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;B4DJE7 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.9164 2 799.912287 1597.81002 68409.31 0.42675 0.00034137 0.30304 0.00024241 0.72979 0.00058377 799.912458451219 804.916455518113 80.171 0.62151 80.171 79.853 80.474 0 108 40 6 0 0 0 0.037037 1 43232 32.062 32.062 1 1.1174 0.96827 0 2527600 1198700 1328900 18485 545 6964 7130 28952 28952 IYQIYEGTSQIQR 13 0 1 Unmodified _IYQIYEGTSQIQR_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;B4DJE7 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 804.9156 2 799.912287 1597.81002 69625.63 0.50704 0.00040559 0.23687 0.00018948 0.74391 0.00059506 800.413903481374 804.916505008982 80.476 0.52708 80.476 80.131 80.658 0 103 32 5 0 0 0 0.024623 2 42549 34.755 32.008 1 1.3663 1.2242 0 2288600 1155100 1133500 18486 545 6964 7130 28953;28954 28953 IYQLLAK 7 1 0 Unmodified _IYQLLAK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 424.7662 2 424.765646 847.516739 91193.59 0.015838 6.7275E-06 -0.22203 -9.431E-05 -0.20619 -8.7583E-05 424.765538897317 428.772750547815 61.315 1.415 61.315 60.731 62.146 0 478 108 8 0 0 0 0.013378 2 34995 102.98 42.979 1 0.80255 0.90346 0 118110000 65873000 52236000 18487 908 6965 7131 28955;28956 28956 IYQLLAK 7 1 0 Unmodified _IYQLLAK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 424.7654 2 424.765646 847.516739 91623.84 -0.097492 -4.1411E-05 -0.002251 -9.5615E-07 -0.099743 -4.2367E-05 424.765628987644 428.772777267173 59.903 1.0314 59.903 59.589 60.62 0 376 73 8 0 0 0 0.021813 2 34820 92.692 36.051 1 0.85747 0.97666 0 149190000 78450000 70743000 18488 908 6965 7131 28957;28958 28958 IYQNGESFQPNCK 13 1 0 Unmodified _IYQNGESFQPNCK_ 0 0 0 B4DI61;Q6FI18;O00622;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.8664 2 792.859197 1583.70384 68197.6 0.75995 0.00060253 0.046021 3.6488E-05 0.80597 0.00063902 792.859512936388 796.866280837146 37.63 0.48289 37.63 37.39 37.873 0 129 39 5 0 0 0 0.00012922 1 19122 90.15 83.91 1 2.2383 2.2944 0 13037000 4917500 8119700 18489 979 6966 7132 28959 28959 IYQNGESFQPNCK 13 1 0 Unmodified _IYQNGESFQPNCK_ 0 0 0 B4DI61;Q6FI18;O00622;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.8685 2 792.859197 1583.70384 68111.75 0.97001 0.00076908 0.7229 0.00057316 1.6929 0.0013422 792.86183017009 797.368530860344 36.582 0.46941 36.582 36.371 36.841 0 133 35 7 0 0 0 6.1843E-19 1 18814 145.25 135.93 1 1.8697 1.9741 0 23676000 10313000 13363000 18490 979 6966 7132 28960 28960 IYQNGESFQPNCK 13 1 0 Unmodified _IYQNGESFQPNCK_ 0 0 0 B4DI61;Q6FI18;O00622;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.3602 2 792.859197 1583.70384 66798.71 0.55722 0.0004418 -0.042181 -3.3444E-05 0.51504 0.00040835 793.360798880188 796.866249022697 43.66 0.56117 43.66 43.408 43.969 -3.8147E-06 182 36 8 0 0 0 0.031677 1 19990 33.225 29.58 1 1.5458 1.2047 0 3605000 1381800 2223100 18491 979 6966 7132 28961 28961 IYQNIQDGSLDLNAAESGVQHK 22 1 0 Unmodified _IYQNIQDGSLDLNAAESGVQHK_ 0 0 0 A0A024R845;P61106 A0A024R845 A0A024R845 RAB14 Ras-related protein Rab-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.0655 3 800.731182 2399.17172 69008.51 0.68688 0.00055001 -0.36658 -0.00029353 0.3203 0.00025647 801.399464285564 803.736568874365 78.477 0.43701 78.477 78.248 78.685 0 159 38 6 0 0 0 1.6799E-08 2 46457 67.928 67.928 1 1.5301 1.505 0 23739000 8957900 14781000 18492 242 6967 7133 28962;28963 28963 IYQNIQDGSLDLNAAESGVQHK 22 1 0 Unmodified _IYQNIQDGSLDLNAAESGVQHK_ 0 0 0 A0A024R845;P61106 A0A024R845 A0A024R845 RAB14 Ras-related protein Rab-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.0652 3 800.731182 2399.17172 69070.13 0.94819 0.00075925 -0.19665 -0.00015747 0.75154 0.00060178 801.064785559429 803.402560484528 77.526 0.45542 77.526 77.284 77.739 0 160 37 8 0 0 0 1.2159E-16 1 46877 109.85 109.85 1 1.3318 1.4089 0 23580000 11358000 12221000 18493 242 6967 7133 28964 28964 IYQVLDFR 8 0 1 Unmodified _IYQVLDFR_ 0 0 0 Q9Y5Q8;Q5T7U1;Q5T7U0;B7Z1V3;H7BY84;Q9NXK9 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.2902 2 527.290017 1052.56548 89986.58 0.54977 0.00028989 0.40016 0.000211 0.94993 0.00050089 527.290303020036 532.294405186883 91.744 0.56479 91.744 91.475 92.04 0 104 46 3 0 0 0 0.001222 2 55594 111.01 66.397 1 1.148 1.1605 0 17837000 6323800 11514000 18494 2149 6968 7134 28965;28966 28966 IYSHSLLPVLR 11 0 1 Unmodified _IYSHSLLPVLR_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.5954 3 433.259079 1296.75541 94358.61 0.20988 9.0931E-05 -0.22751 -9.8571E-05 -0.017633 -7.6395E-06 433.258967736446 436.595021638961 86.56 0.65257 86.56 86.323 86.975 0 123 47 5 0 0 0 0.024366 1 52382 22.329 18.467 1 2.5529 2.6036 0 18700000 4525100 14175000 18495 1507 6969 7135 28967 28967 IYSHSLLPVLR 11 0 1 Unmodified _IYSHSLLPVLR_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.5946 3 433.259079 1296.75541 93779.13 0.18507 8.0185E-05 0.069262 3.0008E-05 0.25434 0.00011019 433.593512762237 436.595066706714 84.166 0.99439 84.166 83.846 84.84 0 203 83 5 0 0 0 1.4371E-05 2 51697 82.417 74.312 1 2.7994 2.84 0 20286000 5735400 14550000 18496 1507 6969 7135 28968;28969 28969 IYSINPK 7 1 0 Unmodified _IYSINPK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 421.7469 2 417.739628 833.464704 92008.45 0.28342 0.00011839 0.48644 0.0002032 0.76985 0.0003216 417.739310226981 421.747086045535 37.872 1.0095 37.872 37.359 38.369 -3.8147E-06 386 85 7 0 0 0 0.026656 1 19134 75.311 40.205 1 1.0449 1.1849 0 94428000 51786000 42642000 18497 1942 6970 7136 28970 28970 IYSINPK 7 1 0 Unmodified _IYSINPK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.7469 2 417.739628 833.464704 92905.15 0.26626 0.00011123 -0.52011 -0.00021727 -0.25385 -0.00010604 417.739058794166 421.746617909825 36.857 1.1543 36.857 36.461 37.615 0 375 91 7 0 0 0 0.026873 2 18898 81.381 42.163 1 0.62398 0.71371 0 159820000 94054000 65769000 18498 1942 6970 7136 28971;28972 28971 IYSLSCGK 8 1 0 Unmodified _IYSLSCGK_ 0 0 0 Q9BSC4 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2339 2 464.233853 926.453153 90944.3 0.25766 0.00011961 0.15133 7.0254E-05 0.40899 0.00018987 464.233767675378 468.241014050833 34.896 0.68499 34.896 34.533 35.218 0 145 59 4 0 0 0 0.027047 1 17432 54.157 37.23 1 1.0811 1.1168 0 11026000 4229800 6796000 18499 2000 6971 7137 28973 28973 IYSLSCGK 8 1 0 Unmodified _IYSLSCGK_ 0 0 0 Q9BSC4 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2344 2 464.233853 926.453153 NaN NaN NaN -0.22214 -0.00010312 NaN NaN NaN NaN 34.219 0.4488 34.219 33.947 34.395 0 0 0 0 0.039261 1 17279 54.157 30.185 1 NaN NaN 0 10680000 10680000 0 18500 2000 6971 7137 28974 28974 IYSLSCGK 8 1 0 Unmodified _IYSLSCGK_ 0 0 0 Q9BSC4 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 468.2411 2 464.233853 926.453153 88203.02 0.059926 2.7819E-05 0.86591 0.00040199 0.92584 0.0004298 464.234555807858 468.241132704013 39.672 0.77287 39.672 39.23 40.003 0 166 59 4 0 0 0 0.057469 1 18126 41.025 25.389 1 1.5614 1.2359 0 4990700 1889900 3100800 18501 2000 6971 7137 28975 28975 IYVDDGLISLQVK 13 1 0 Unmodified _IYVDDGLISLQVK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.9097 2 731.911224 1461.8079 70222.96 0.91155 0.00066718 0.23373 0.00017107 1.1453 0.00083825 732.412721145801 735.9184034202 111.06 0.30389 111.06 110.82 111.12 0 61 19 7 0 0 0 1.4574E-23 2 69776 161.67 149.05 1 1.8901 2.1203 0 66333000 16431000 49902000 18502 1481 6972 7138 28976;28977 28977 IYVDDGLISLQVK 13 1 0 Unmodified _IYVDDGLISLQVK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.9189 2 731.911224 1461.8079 70861.97 0.82191 0.00060157 0.22955 0.00016801 1.0515 0.00076958 731.911201550529 735.91846227449 110.57 0.4953 110.57 110.18 110.68 -7.6294E-06 177 35 8 0 0 0 8.712E-05 2 71049 119.34 111.11 1 2.8738 3.2112 0 92747000 22540000 70206000 18503 1481 6972 7138 28978;28979 28979 IYVDDGLISLQVK 13 1 0 Unmodified _IYVDDGLISLQVK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.9199 2 731.911224 1461.8079 69994.38 0.8617 0.00063069 0.59582 0.00043609 1.4575 0.0010668 731.911056791724 735.918671128754 122.26 0.30058 122.26 122.05 122.35 0 42 13 5 0 0 0 4.0164E-05 1 72836 113.47 113.47 1 1.6687 1.3046 0 16266000 3985800 12281000 18504 1481 6972 7138 28980 28980 IYVDDGLISLQVK 13 1 0 Unmodified _IYVDDGLISLQVK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.9191 2 731.911224 1461.8079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.99 1 121.99 121.49 122.49 -7.6294E-06 0 0 0 0.0017486 1 71791 69.979 42.237 1 18505 1481 6972 7138 28981 28981 IYVDDGLISLQVK 13 1 0 Unmodified _IYVDDGLISLQVK_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.9135 2 731.911224 1461.8079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.04 1 122.04 121.54 122.54 0 0 0 0 0.0046966 1 71828 59.542 33.028 1 18506 1481 6972 7138 28982 28982 IYVEIER 7 0 1 Unmodified _IYVEIER_ 0 0 0 A0A0S2Z489;O00232;A0A0S2Z476 A0A0S2Z489 A0A0S2Z489 PSMD12 26S proteasome non-ATPase regulatory subunit 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.26 2 461.255643 920.496732 90094.81 0.30991 0.00014295 -0.54547 -0.0002516 -0.23556 -0.00010865 461.254466905255 466.259662127722 57.93 0.62648 57.93 57.623 58.25 0 145 49 4 0 0 0 0.037563 1 32776 60.788 16.177 1 1.6461 1.7134 0 21868000 6874200 14994000 18507 558 6973 7139 28983 28983 IYVEIER 7 0 1 Unmodified _IYVEIER_ 0 0 0 A0A0S2Z489;O00232;A0A0S2Z476 A0A0S2Z489 A0A0S2Z489 PSMD12 26S proteasome non-ATPase regulatory subunit 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2598 2 461.255643 920.496732 90375.5 0.34106 0.00015732 -0.54739 -0.00025249 -0.20633 -9.517E-05 461.254619106489 466.259601207017 56.872 0.87414 56.872 56.453 57.327 0 181 64 6 0 0 0 0.032902 1 32709 64.803 25.585 1 2.0304 1.9967 0 14348000 4410200 9937500 18508 558 6973 7139 28984 28984 IYVGNLPPDIR 11 0 1 Unmodified _IYVGNLPPDIR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8577 2 628.853512 1255.69247 76433.66 0.49488 0.00031121 0.11883 7.4725E-05 0.6137 0.00038593 628.853426409208 633.857879229863 88.97 2.0518 88.97 88.181 90.233 0 840 165 7 0 0 0 3.6873E-18 5 53717 162.88 112.27 1 1.2091 1.4055 0 181100000 74448000 106660000 18509 1333 6974 7140 28985;28986;28987;28988;28989 28987 IYVGNLPPDIR 11 0 1 Unmodified _IYVGNLPPDIR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8577 2 628.853512 1255.69247 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.782 1 89.782 89.282 90.282 0 0 0 0 0.01529 1 54202 55.649 15.545 1 18510 1333 6974 7140 28990 28990 IYVGNLPPDIR 11 0 1 Unmodified _IYVGNLPPDIR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.8535 2 628.853512 1255.69247 76196.78 0.68826 0.00043281 -0.19737 -0.00012411 0.49089 0.0003087 628.853239437406 633.857532128279 88.137 2.0964 88.137 87.277 89.373 0 851 175 6 0 0 0 2.8462E-12 6 54453 138.08 98.078 1 1.2367 1.4177 0 176270000 73515000 102760000 18511 1333 6974 7140 28991;28992;28993;28994;28995;28996 28994 IYVGNLPPDIR 11 0 1 Unmodified _IYVGNLPPDIR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.8537 2 628.853512 1255.69247 76269.95 0.4677 0.00029411 -0.26367 -0.00016581 0.20403 0.0001283 628.853264157401 633.857635331592 101.94 2.0664 101.94 101.06 103.13 0 647 144 6 0 0 0 5.6595E-05 4 57861 99.013 74.237 1 0.7767 0.65843 0 9310100 5732500 3577600 18512 1333 6974 7140 28997;28998;28999;29000 29000 IYVGNLPPDIR 11 0 1 Unmodified _IYVGNLPPDIR_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3QQV5;J3KSW7 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.8585 2 628.853512 1255.69247 76932.83 0.488 0.00030688 -0.43358 -0.00027266 0.054422 3.4223E-05 628.85323037973 633.857599350047 101.56 2.3036 101.56 100.87 103.17 0 592 158 4 0 0 0 0.00047879 3 56840 75.294 53.83 1 0.75958 0.62021 0 9325800 5044800 4281000 18513 1333 6974 7140 29001;29002;29003 29003 IYVGNLPTDVR 11 0 1 Unmodified _IYVGNLPTDVR_ 0 0 0 Q13242;A8K3M9;H0YIB4;S4R3G0;B4DFT9 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.8479 2 623.843145 1245.67174 77377.73 0.32218 0.00020099 0.37174 0.00023191 0.69392 0.0004329 623.843161668886 628.847699447705 81.5 0.6485 81.5 81.238 81.887 0 261 56 7 0 0 0 7.6225E-23 2 48547 166.66 138.26 1 1.6011 1.7775 0 70154000 22653000 47501000 18514 1709 6975 7141 29004;29005 29005 IYVGNLPTDVR 11 0 1 Unmodified _IYVGNLPTDVR_ 0 0 0 Q13242;A8K3M9;H0YIB4;S4R3G0;B4DFT9 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.8431 2 623.843145 1245.67174 77179.26 0.56719 0.00035384 -0.057437 -3.5832E-05 0.50975 0.00031801 623.843008135593 628.847151602369 80.48 0.59775 80.48 80.174 80.771 0 240 48 7 0 0 0 2.5895E-05 2 49015 102.62 82.835 1 1.8662 2.1634 0 58005000 19677000 38328000 18515 1709 6975 7141 29006;29007 29007 IYVISLAEPR 10 0 1 Unmodified _IYVISLAEPR_ 0 0 0 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85;C9JQM9 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.3397 2 580.837331 1159.66011 81648.16 1.0461 0.00060762 0.22633 0.00013146 1.2724 0.00073909 580.837256129846 585.841366351834 95.987 0.72792 95.987 95.697 96.425 0 232 64 6 0 0 0 0.0013651 3 58557 73.985 73.985 1 1.4878 1.522 0 33246000 11441000 21805000 18516 610 6976 7142 29008;29009;29010 29010 IYVISLAEPR 10 0 1 Unmodified _IYVISLAEPR_ 0 0 0 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85;C9JQM9 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.8413 2 580.837331 1159.66011 81736.55 0.77356 0.00044931 -0.041443 -2.4072E-05 0.73211 0.00042524 580.837161573382 585.841096124422 95.141 0.71603 95.141 94.79 95.506 0 230 61 6 0 0 0 1.1619E-05 2 59140 104.01 88.632 1 1.7868 1.956 0 30899000 12068000 18831000 18517 610 6976 7142 29011;29012 29011 IYVISLAEPR 10 0 1 Unmodified _IYVISLAEPR_ 0 0 0 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85;C9JQM9 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.8412 2 580.837331 1159.66011 79341.27 0.66797 0.00038798 1.2717 0.00073867 1.9397 0.0011266 581.341266195272 585.841255214902 109.12 0.581 109.12 108.83 109.41 0 106 27 5 0 0 0 0.028741 1 62729 43.308 39.561 1 0.84811 0.70836 0 3252600 1775600 1477000 18518 610 6976 7142 29013 29013 IYVISLAEPR 10 0 1 Unmodified _IYVISLAEPR_ 0 0 0 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85;C9JQM9 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.8413 2 580.837331 1159.66011 79959.74 0.53812 0.00031256 0.77603 0.00045075 1.3142 0.00076331 580.837314412236 585.841323606562 108.86 0.73386 108.86 108.65 109.38 0 86 34 4 0 0 0 0.0013651 1 61719 73.985 70.239 1 0.98646 0.84508 0 3313700 1548000 1765700 18519 610 6976 7142 29014 29014 IYVLLR 6 0 1 Unmodified _IYVLLR_ 0 0 0 A0A024R6D4;P84090 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 388.7552 2 388.755082 775.49561 95801.92 0.24013 9.3351E-05 -0.15241 -5.9248E-05 0.087722 3.4102E-05 388.754927014672 393.759019910325 78.731 1.2658 78.731 78.21 79.476 0 421 112 5 0 0 0 0.035373 1 46857 116.49 25.951 1 0.96446 1.068 0 62513000 29348000 33165000 18520 201 6977 7143 29015 29015 IYYLGSEVPEK 11 1 0 Unmodified _IYYLGSEVPEK_ 0 0 0 Q6RI45 Q6RI45 Q6RI45 BRWD3 Bromodomain and WD repeat-containing protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.3382 2 649.337361 1296.66017 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.33 1 73.33 72.83 73.83 0 0 0 0 0.0094422 1 44031 59.8 37.652 1 18521 1860 6978 7144 29016 29016 IYYPDFIVPDPK 12 1 0 Unmodified _IYYPDFIVPDPK_ 0 0 0 P49916;B7Z6I3;C4B7Q3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.8826 2 733.881936 1465.74932 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.49 1 112.49 111.99 112.99 0 0 0 0 0.048361 1 71037 42.718 27.056 1 18522 1589 6979 7145 29017 29017 IYYPDFIVPDPK 12 1 0 Unmodified _IYYPDFIVPDPK_ 0 0 0 P49916;B7Z6I3;C4B7Q3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.8826 2 733.881936 1465.74932 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.94 1 111.94 111.44 112.44 0 0 0 0 0.00022717 1 72348 83.862 54.775 1 18523 1589 6979 7145 29018 29018 IYYPDFIVPDPK 12 1 0 Unmodified _IYYPDFIVPDPK_ 0 0 0 P49916;B7Z6I3;C4B7Q3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 733.8828 2 733.881936 1465.74932 70858.95 0.87375 0.00064123 0.10923 8.0162E-05 0.98298 0.00072139 733.881542391527 737.889387567098 123.41 0.61478 123.41 123.1 123.71 0 85 26 5 0 0 0 0.0062634 2 72902 49.35 40.452 1 0.70487 0.55228 0 3769000 2037400 1731600 18524 1589 6979 7145 29019;29020 29020 KADEVLEILK 10 2 0 Unmodified _KADEVLEILK_ 0 0 1 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.3574 2 579.342446 1156.67034 NaN NaN NaN 0.18962 0.00010985 NaN NaN NaN NaN 79.21 0.73184 79.21 78.875 79.607 0 0 0 0 0.028317 1 46909 52.579 24.405 1 NaN NaN 0 8768800 0 8768800 18525 1411 6980 7146 29021 29021 KADEVLEILK 10 2 0 Unmodified _KADEVLEILK_ 0 0 1 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3425 2 579.342446 1156.67034 79535.88 0.47009 0.00027234 0.27928 0.0001618 0.74937 0.00043414 579.34246743955 587.356775448664 77.004 0.79993 77.004 76.609 77.409 0 262 63 6 0 0 0 8.9221E-08 1 46530 115.18 81.797 1 0.9677 1.1195 0 40683000 20491000 20192000 18526 1411 6980 7146 29022 29022 KADEVLEILK 10 2 0 Unmodified _KADEVLEILK_ 0 0 1 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.3578 2 579.342446 1156.67034 NaN NaN NaN 0.46942 0.00027196 NaN NaN NaN NaN 88.602 0.66164 88.602 88.313 88.975 0 0 0 0 0.054164 1 48075 45.939 24.411 1 NaN NaN 0 3145600 0 3145600 18527 1411 6980 7146 29023 29023 KADIDLTK 8 2 0 Unmodified _KADIDLTK_ 0 0 1 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.2609 2 452.260925 902.507297 88131.46 0.44579 0.00020161 0.10118 4.576E-05 0.54697 0.00024737 452.260838232568 460.274845844468 24.249 0.36608 24.249 24.083 24.449 0 68 15 6 0 0 0 0.0045808 1 10033 99.013 43.509 1 1.0374 1.2248 0 44813000 21827000 22987000 18528 1639 6981 7147 29024 29024 KADIDLTK 8 2 0 Unmodified _KADIDLTK_ 0 0 1 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.2607 2 452.260925 902.507297 89238.16 0.061571 2.7846E-05 0.18289 8.2715E-05 0.24446 0.00011056 452.260912688345 460.274926893661 23.737 0.46893 23.737 23.489 23.958 0 60 17 6 0 0 0 0.0020694 1 9572 110.88 45.079 1 1.1318 1.3094 0 41448000 19768000 21679000 18529 1639 6981 7147 29025 29025 KADNVVNIAR 10 1 1 Unmodified _KADNVVNIAR_ 0 0 1 Q92621 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.326 2 550.314554 1098.61456 82729.25 0.27076 0.000149 0.13225 7.278E-05 0.40301 0.00022178 550.314858428607 559.325793303669 27.371 0.23066 27.371 27.252 27.483 0 37 11 6 0 0 0 0.0089301 1 12677 60.298 47.508 1 0.99747 1.1413 0 22190000 9639500 12551000 18530 1950 6982 7148 29026 29026 KADTEEEFLAFR 12 1 1 Unmodified _KADTEEEFLAFR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.3707 2 728.359356 1454.70416 65415.74 0.43733 0.00031854 0.64318 0.00046847 1.0805 0.00078701 728.360396394723 737.370300651477 88.958 0.80716 88.958 88.482 89.289 0 191 37 8 0 0 0 0.0042924 1 48228 58.274 53.808 1 3.6964 3.1246 0 9842800 2287200 7555600 18531 1569 6983 7149 29027 29027 KADTEEEFLAFR 12 1 1 Unmodified _KADTEEEFLAFR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.9156 3 485.908663 1454.70416 NaN NaN NaN -0.78545 -0.00038166 NaN NaN NaN NaN 89.041 0.62589 89.041 88.678 89.303 0 0 0 0 0.0084343 1 48278 46.88 31.34 1 NaN NaN 0 5581500 0 5581500 18532 1569 6983 7149 29028 29028 KADVEEEFLAFR 12 1 1 Unmodified _KADVEEEFLAFR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.2565 3 485.248908 1452.72489 87777.66 0.40682 0.00019741 0.21524 0.00010444 0.62205 0.00030185 485.248815310342 491.256494984186 92.164 1.577 92.164 91.197 92.774 0 741 140 8 0 0 0 3.0694E-13 4 55953 108.56 100.65 1 1.7722 2.1365 0 122170000 43962000 78208000 18533 1569 6984 7150 29029;29030;29031;29032 29031 KADVEEEFLAFR 12 1 1 Unmodified _KADVEEEFLAFR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.3813 2 727.369724 1452.72489 69491.64 0.89711 0.00065253 -1.0397 -0.00075628 -0.14263 -0.00010374 727.369121779658 736.379654526626 92.159 1.153 92.159 91.579 92.732 0 507 106 7 0 0 0 1.4631E-12 1 55875 132.17 121.02 1 1.9358 2.3301 0 96433000 35347000 61086000 18534 1569 6984 7150 29033 29033 KADVEEEFLAFR 12 1 1 Unmodified _KADVEEEFLAFR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.2492 3 485.248908 1452.72489 86919.5 0.79065 0.00038366 0.21924 0.00010639 1.0099 0.00049005 485.248582826885 491.256568630004 90.51 1.5891 90.51 89.5 91.089 0 683 132 8 0 0 0 4.3758E-09 3 56061 96.23 81.668 1 1.8058 2.1344 0 159110000 58568000 100540000 18535 1569 6984 7150 29034;29035;29036 29036 KADVEEEFLAFR 12 1 1 Unmodified _KADVEEEFLAFR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.3818 2 727.369724 1452.72489 71489.07 1.1321 0.00082349 -1.3973 -0.0010164 -0.26517 -0.00019287 727.369393685592 736.379180540839 90.522 1.2911 90.522 89.89 91.181 0 525 109 7 0 0 0 1.861E-17 1 55927 138.75 120.95 1 1.7664 2.081 0 94995000 33612000 61383000 18536 1569 6984 7150 29037 29037 KADVEEEFLAFR 12 1 1 Unmodified _KADVEEEFLAFR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.9577 2 727.369724 1452.72489 71029.58 0.67439 0.00049053 0.38662 0.00028122 1.061 0.00077174 727.370767569313 736.380752792254 89.791 0.17897 89.791 89.711 89.89 -7.6294E-06 42 15 4 0 0 0 0.022821 1 55531 48.643 48.643 1 1.5423 1.7225 0 11574000 4315600 7258300 18537 1569 6984 7150 29038 29038 KADVEEEFLAFR 12 1 1 Unmodified _KADVEEEFLAFR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 491.2568 3 485.248908 1452.72489 85966.01 0.23412 0.00011361 0.41269 0.00020026 0.64682 0.00031387 485.248311063075 491.256632714846 103.66 1.2383 103.66 103.26 104.49 -7.6294E-06 409 81 9 0 0 0 0.000529 3 59281 48.659 48.659 1 3.6933 3.2546 0 37404000 7199100 30205000 18538 1569 6984 7150 29039;29040;29041 29041 KADVEEEFLAFR 12 1 1 Unmodified _KADVEEEFLAFR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.3699 2 727.369724 1452.72489 69975.7 0.63651 0.00046298 0.23082 0.00016789 0.86733 0.00063087 727.369751508428 736.380903283896 103.67 1.0534 103.67 103.22 104.28 0 354 68 7 0 0 0 0.0057735 3 58966 56.02 48.375 1 3.3305 2.9304 0 34618000 6905400 27713000 18539 1569 6984 7150 29042;29043;29044 29043 KADVEEEFLAFR 12 1 1 Unmodified _KADVEEEFLAFR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.5913 3 485.248908 1452.72489 85946.85 0.076695 3.7216E-05 0.57785 0.0002804 0.65454 0.00031762 485.583366617352 491.256724651358 103.39 1.3182 103.39 102.96 104.27 0 439 89 8 0 0 0 0.00016494 3 57698 56.122 52.406 1 3.6972 3.1395 0 23929000 4987700 18941000 18540 1569 6984 7150 29045;29046;29047 29045 KADVEEEFLAFR 12 1 1 Unmodified _KADVEEEFLAFR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.3715 2 727.369724 1452.72489 69976.44 0.45056 0.00032772 0.4728 0.0003439 0.92336 0.00067162 727.370241987547 736.38098901997 103.37 0.97483 103.37 102.99 103.96 0 358 65 7 0 0 0 0.0016711 2 57899 62.694 62.694 1 3.1605 2.6845 0 25359000 5205700 20153000 18541 1569 6984 7150 29048;29049 29048 KADVEEEFLAFRK 13 2 1 Unmodified _KADVEEEFLAFRK_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.6263 3 527.947229 1580.81986 81781.09 0.38011 0.00020068 -0.46594 -0.00024599 -0.085822 -4.5309E-05 527.947708611904 536.62578408966 83.637 0.55114 83.637 83.385 83.937 0 174 41 6 0 0 0 0.00024439 1 45551 67.964 67.964 1 3.565 3.6932 0 13134000 2589100 10545000 18542 1569 6985 7151 29050 29050 KADVEEEFLAFRK 13 2 1 Unmodified _KADVEEEFLAFRK_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.9468 3 527.947229 1580.81986 82456.84 0.58608 0.00030942 -0.27798 -0.00014676 0.3081 0.00016266 528.28157203852 536.625951409173 83.483 0.40446 83.483 83.272 83.676 0 98 21 7 0 0 0 0.0092233 2 44686 31.526 31.526 1 3.8041 3.7035 0 14732000 3184200 11548000 18543 1569 6985 7151 29051;29052 29051 KADVEEEFLALR 12 1 1 Unmodified _KADVEEEFLALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.9212 3 473.920791 1418.74054 99791.22 0.076979 3.6482E-05 1.5061 0.00071379 1.5831 0.00075028 473.921302739566 479.927866025187 88.577 0.61242 88.577 88.406 89.019 0 83 46 5 0 0 0 0.0032714 1 53377 31.675 25.832 1 1.8415 1.9877 0 10849000 3894400 6955100 18544 1569 6986 7152 29053 29053 KADVEEEFLALR 12 1 1 Unmodified _KADVEEEFLALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 719.3881 2 710.377549 1418.74054 73113.72 0.50488 0.00035866 -0.57021 -0.00040506 -0.065324 -4.6404E-05 710.377732456991 719.388463236896 100.47 1.0249 100.47 100.04 101.06 0 274 79 5 0 0 0 0.020655 1 56723 45.077 45.077 1 3.5718 3.017 0 7895100 2002300 5892800 18545 1569 6986 7152 29054 29054 KADVEEEFLALR 12 1 1 Unmodified _KADVEEEFLALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.9209 3 473.920791 1418.74054 84575.6 0.021698 1.0283E-05 1.2895 0.00061114 1.3112 0.00062142 474.256879378099 479.927868322819 100.48 0.84904 100.48 100.06 100.91 0 222 67 5 0 0 0 0.00082615 1 56929 45.28 41.563 1 3.4981 2.925 0 6542300 2105400 4436900 18546 1569 6986 7152 29055 29055 KADVEEEFLALR 12 1 1 Unmodified _KADVEEEFLALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.3895 2 710.377549 1418.74054 72877.64 0.54902 0.00039001 -0.83914 -0.0005961 -0.29011 -0.00020609 710.37763951997 719.388334439684 100.24 0.97452 100.24 99.729 100.7 0 249 82 5 0 0 0 0.0088849 1 55759 51.286 43.637 1 3.5475 2.9955 0 9269100 1862400 7406700 18547 1569 6986 7152 29056 29056 KADVEEEFLALR 12 1 1 Unmodified _KADVEEEFLALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.921 3 473.920791 1418.74054 84929.34 0.22261 0.0001055 1.1807 0.00055955 1.4033 0.00066505 474.256766331914 479.92784213249 100.22 0.88766 100.22 99.861 100.75 0 212 73 5 0 0 0 0.00019319 1 55779 53.448 45.537 1 3.1935 2.6796 0 6510400 2295900 4214500 18548 1569 6986 7152 29057 29057 KADVEEEFLALRK 13 2 1 Unmodified _KADVEEEFLALRK_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.2975 3 516.619112 1546.83551 82726.07 0.14503 7.4923E-05 0.29844 0.00015418 0.44347 0.0002291 516.619136489113 525.298111857138 80.552 1.0029 80.552 80.06 81.062 0 271 68 5 0 0 0 0.050412 1 43367 28.812 28.812 1 4.0854 4.2323 0 12576000 2456200 10120000 18549 1569 6987 7153 29058 29058 KADVEEESLALR 12 1 1 Unmodified _KADVEEESLALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3702 2 680.359356 1358.70416 75565.5 0.45014 0.00030626 -0.18757 -0.00012761 0.26257 0.00017864 680.359434363631 689.370380853322 45.945 0.31584 45.945 45.728 46.044 0 73 27 4 0 0 0 0.0050318 2 25216 57.149 55.721 1 1.1888 1.3432 0 15322000 8720100 6601600 18550 1569 6988 7154 29059;29060 29059 KADVEEESLALR 12 1 1 Unmodified _KADVEEESLALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.3712 2 680.359356 1358.70416 73194.84 0.60953 0.0004147 0.44078 0.00029989 1.0503 0.00071459 680.359508778454 689.370842628811 54.626 0.57299 54.626 54.331 54.904 3.8147E-06 167 38 6 0 0 0 0.021203 1 27212 44.847 31.494 1 3.0571 2.5292 0 5568200 1449700 4118500 18551 1569 6988 7154 29061 29061 KADVEEESLALR 12 1 1 Unmodified _KADVEEESLALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 459.9164 3 453.908663 1358.70416 89303.02 -0.060669 -2.7538E-05 0.0081168 3.6843E-06 -0.052553 -2.3854E-05 453.908745171476 459.916125335919 54.94 0.71386 54.94 54.53 55.244 0 165 52 5 0 0 0 0.0092704 1 26870 25.731 18.007 1 4.0693 3.459 0 3216800 796960 2419900 18552 1569 6988 7154 29062 29062 KADVEEESLALR 12 1 1 Unmodified _KADVEEESLALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.371 2 680.359356 1358.70416 NaN NaN NaN 0.50997 0.00034696 NaN NaN NaN NaN 54.947 0.53131 54.947 54.681 55.212 0 0 0 0 0.03192 1 26853 47.062 32.855 1 NaN NaN 0 4400400 0 4400400 18553 1569 6988 7154 29063 29063 KADVEEESLALRK 13 2 1 Unmodified _KADVEEESLALRK_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.2859 3 496.606984 1486.79912 84548.66 0.22715 0.00011281 -0.27364 -0.00013589 -0.046492 -2.3088E-05 496.606993596823 505.285829518333 37.342 0.47715 37.342 37.117 37.595 0 167 35 7 0 0 0 0.00027387 1 16861 66.485 66.485 1 3.9639 4.1065 0 7710100 1482700 6227400 18554 1569 6989 7155 29064 29064 KADVEEESLALRK 13 2 1 Unmodified _KADVEEESLALRK_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.2867 3 496.606984 1486.79912 83116.05 0.089946 4.4668E-05 -0.025149 -1.2489E-05 0.064798 3.2179E-05 496.606813399758 505.285833250991 37.068 0.47883 37.068 36.868 37.346 0 151 41 6 0 0 0 0.04257 1 16137 30.567 27.7 1 4.2285 4.1166 0 5950000 1017300 4932700 18555 1569 6989 7155 29065 29065 KAEAGAGSATEFQFR 15 1 1 Unmodified _KAEAGAGSATEFQFR_ 0 0 1 P46783;Q59GE4;Q9NQ39 P46783 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.9349 3 523.926716 1568.75832 82227.95 0.52684 0.00027603 0.02233 1.17E-05 0.54917 0.00028772 523.92657686922 529.934238288621 48.239 0.73364 48.239 47.914 48.648 0 350 58 8 0 0 0 1.4833E-06 3 26106 75.998 72.282 1 1.1953 1.4414 0 127910000 56098000 71817000 18556 1573 6990 7156 29066;29067;29068 29066 KAEAGAGSATEFQFR 15 1 1 Unmodified _KAEAGAGSATEFQFR_ 0 0 1 P46783;Q59GE4;Q9NQ39 P46783 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.3973 2 785.386436 1568.75832 66832.94 0.76916 0.00060409 0.12782 0.00010039 0.89699 0.00070448 785.386158333886 794.39895870202 48.224 0.5322 48.224 47.976 48.509 0 198 43 7 0 0 0 4.2178E-15 4 26211 132.08 119.13 1 1.0073 1.1985 0 46691000 21071000 25620000 18557 1573 6990 7156 29069;29070;29071;29072 29069 KAEAGAGSATEFQFR 15 1 1 Unmodified _KAEAGAGSATEFQFR_ 0 0 1 P46783;Q59GE4;Q9NQ39 P46783 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.9343 3 523.926716 1568.75832 82266.13 0.48307 0.00025309 0.028352 1.4854E-05 0.51142 0.00026795 523.926692103532 529.9342020866 46.478 0.6415 46.478 46.241 46.882 0 272 51 8 0 0 0 2.8561E-11 2 25600 112.24 106.52 1 1.378 1.6277 0 144710000 48481000 96225000 18558 1573 6990 7156 29073;29074 29073 KAEAGAGSATEFQFR 15 1 1 Unmodified _KAEAGAGSATEFQFR_ 0 0 1 P46783;Q59GE4;Q9NQ39 P46783 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.9265 3 523.926716 1568.75832 82579.29 0.34066 0.00017848 0.046802 2.4521E-05 0.38746 0.000203 523.926707151434 529.934187628252 55.578 0.57473 55.578 55.318 55.893 0 224 35 8 0 0 0 0.010714 2 27790 23.991 23.991 1 1.3466 1.1675 0 16554000 6828000 9726400 18559 1573 6990 7156 29075;29076 29076 KAEAGAGSATEFQFR 15 1 1 Unmodified _KAEAGAGSATEFQFR_ 0 0 1 P46783;Q59GE4;Q9NQ39 P46783 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 794.8997 2 785.386436 1568.75832 68116.32 0.64087 0.00050333 0.43839 0.0003443 1.0793 0.00084763 785.386429565946 794.397833295867 55.594 0.42676 55.594 55.381 55.808 -3.8147E-06 103 25 6 0 0 0 0.016244 1 27808 35.204 29.232 1 1.1446 0.95973 0 3357300 1621600 1735700 18560 1573 6990 7156 29077 29077 KAEAGAGSATEFQFR 15 1 1 Unmodified _KAEAGAGSATEFQFR_ 0 0 1 P46783;Q59GE4;Q9NQ39 P46783 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.9346 3 523.926716 1568.75832 82532.9 0.32397 0.00016973 -0.10641 -5.5749E-05 0.21756 0.00011398 523.926616865454 529.934127590447 55.858 0.72022 55.858 55.579 56.299 -3.8147E-06 269 47 10 0 0 0 7.6815E-05 2 27372 50.04 50.04 1 1.3465 1.1404 0 14055000 5889600 8165000 18561 1573 6990 7156 29078;29079 29079 KAEAGAGSATEFQFR 15 1 1 Unmodified _KAEAGAGSATEFQFR_ 0 0 1 P46783;Q59GE4;Q9NQ39 P46783 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 794.3976 2 785.386436 1568.75832 69106.15 0.60288 0.00047349 0.47134 0.00037018 1.0742 0.00084367 785.3870523386 794.397557265791 55.871 0.70395 55.871 55.378 56.082 3.8147E-06 140 42 6 0 0 0 0.0073556 1 27467 39.364 39.364 1 1.1447 0.9705 0 3419000 1502100 1916900 18562 1573 6990 7156 29080 29080 KAEAVVNTVDISER 14 1 1 Unmodified _KAEAVVNTVDISER_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.2839 3 510.942255 1529.80494 84426.23 0.53819 0.00027498 -0.29936 -0.00015295 0.23883 0.00012203 510.942137237149 516.949430383737 48.559 0.63014 48.559 48.264 48.894 0 280 47 8 0 0 0 4.291E-05 2 26356 66.246 59.207 1 0.9063 1.0935 0 140140000 73997000 66140000 18563 1898 6991 7157 29081;29082 29081 KAEAVVNTVDISER 14 1 1 Unmodified _KAEAVVNTVDISER_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.9196 2 765.909744 1529.80494 69564.02 0.73595 0.00056367 -0.22758 -0.0001743 0.50838 0.00038937 765.909837964566 774.920614075289 48.565 0.44672 48.565 48.334 48.78 0 106 32 5 0 0 0 3.0554E-37 2 26404 164.48 164.48 1 0.91567 1.0822 0 38014000 18696000 19318000 18564 1898 6991 7157 29083;29084 29084 KAEAVVNTVDISER 14 1 1 Unmodified _KAEAVVNTVDISER_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.943 3 510.942255 1529.80494 83507.93 0.496 0.00025343 -0.32345 -0.00016526 0.17255 8.8162E-05 510.942116398574 516.949494092734 46.851 0.57763 46.851 46.639 47.217 3.8147E-06 276 51 9 0 0 0 5.581E-07 2 25878 78.71 73.989 1 0.91246 1.0772 0 132020000 65651000 66368000 18565 1898 6991 7157 29085;29086 29086 KAEAVVNTVDISER 14 1 1 Unmodified _KAEAVVNTVDISER_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.9229 2 765.909744 1529.80494 NaN NaN NaN 0.10861 8.3183E-05 NaN NaN NaN NaN 46.849 0.27524 46.849 46.736 47.011 0 0 0 0 0.00028751 1 25881 81.904 66.931 1 NaN NaN 0 15288000 0 15288000 18566 1898 6991 7157 29087 29087 KAEAVVNTVDISER 14 1 1 Unmodified _KAEAVVNTVDISER_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.9111 2 765.909744 1529.80494 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.73 1 46.73 46.23 47.23 0 0 0 0 0.0082951 1 25853 62.088 45.456 1 18567 1898 6991 7157 29088 29088 KAEAVVNTVDISER 14 1 1 Unmodified _KAEAVVNTVDISER_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.943 3 510.942255 1529.80494 84385.55 0.44364 0.00022667 -0.23033 -0.00011769 0.21331 0.00010899 510.942099035345 516.949580204871 55.826 0.76598 55.826 55.59 56.356 0 290 49 10 0 0 0 2.2463E-05 2 27983 71.344 59.368 1 1.1398 0.99236 0 20423000 9756300 10667000 18568 1898 6991 7157 29089;29090 29090 KAEAVVNTVDISER 14 1 1 Unmodified _KAEAVVNTVDISER_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.922 2 765.909744 1529.80494 70395.94 0.6701 0.00051324 -0.44617 -0.00034172 0.22393 0.00017151 765.909623111705 774.920846460964 55.845 0.46869 55.845 55.64 56.108 0 148 30 8 0 0 0 0.003613 2 27985 49.31 49.31 1 1.018 0.83433 0 4834900 2490700 2344100 18569 1898 6991 7157 29091;29092 29091 KAEAVVNTVDISER 14 1 1 Unmodified _KAEAVVNTVDISER_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.9495 3 510.942255 1529.80494 84097.03 0.36732 0.00018768 -0.21928 -0.00011204 0.14803 7.5636E-05 510.942153206321 516.949636055314 56.146 0.57412 56.146 55.926 56.5 -3.8147E-06 258 38 10 0 0 0 0.00047744 2 27555 39.685 39.685 1 1.0912 0.92569 0 19608000 8724700 10883000 18570 1898 6991 7157 29093;29094 29093 KAEAVVNTVDISER 14 1 1 Unmodified _KAEAVVNTVDISER_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.411 2 765.909744 1529.80494 69902.22 0.71677 0.00054898 -0.64198 -0.0004917 0.074795 5.7286E-05 765.909541950644 774.920757335347 56.168 0.70524 56.168 55.926 56.631 3.8147E-06 210 48 8 0 0 0 0.0016073 2 27607 57.106 57.106 1 0.83486 0.69891 0 5730300 3061800 2668500 18571 1898 6991 7157 29095;29096 29096 KAEEATEAQEVVEATPEGACTEPR 24 1 1 Unmodified _KAEEATEAQEVVEATPEGACTEPR_ 0 0 1 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 874.4108 3 868.069423 2601.18644 65400.79 0.13948 0.00012108 -0.30588 -0.00026553 -0.16641 -0.00014445 868.403380074134 874.076980354817 70.745 0.36893 70.745 70.569 70.938 0 135 25 8 0 0 0 0.006047 3 37148 22.313 19.551 1 1.1117 0.91396 0 4426000 1664900 2761000 18572 918 6992 7158 29097;29098;29099 29097 KAEEATEAQEVVEATPEGACTEPR 24 1 1 Unmodified _KAEEATEAQEVVEATPEGACTEPR_ 0 0 1 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 874.4127 3 868.069423 2601.18644 65030.57 -0.18758 -0.00016283 0.18834 0.00016349 0.0007629 6.6225E-07 868.403342578141 874.411352012608 71.236 0.47928 71.236 71.039 71.519 0 120 27 7 0 0 0 0.018999 1 36649 17.216 13.689 1 1.148 0.97014 0 3694100 1622100 2072000 18573 918 6992 7158 29100 29100 KAEEELGELEAK 12 2 0 Unmodified _KAEEELGELEAK_ 0 0 1 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.348 2 673.345914 1344.67728 NaN NaN NaN 0.25564 0.00017213 NaN NaN NaN NaN 37.926 0.26714 37.926 37.765 38.032 0 0 0 0 4.2797E-08 2 19737 106.26 67.69 1 NaN NaN 0 15300000 15300000 0 18574 803 6993 7159 29101;29102 29101 KAEEELGELEAK 12 2 0 Unmodified _KAEEELGELEAK_ 0 0 1 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.3606 2 673.345914 1344.67728 74102.76 0.53888 0.00036285 -0.13442 -9.0513E-05 0.40445 0.00027234 673.345478207118 681.360146084146 45.143 0.56136 45.143 44.874 45.435 0 163 41 6 0 0 0 0.00025323 2 21507 92.792 92.792 1 1.3664 1.1745 0 6865700 3472600 3393100 18575 803 6993 7159 29103;29104 29103 KAEEELGELEAK 12 2 0 Unmodified _KAEEELGELEAK_ 0 0 1 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.3609 2 673.345914 1344.67728 74189.25 0.90438 0.00060896 -0.57195 -0.00038512 0.33242 0.00022384 673.345333559473 681.359783774948 45.067 0.63235 45.067 44.675 45.308 0 189 46 6 0 0 0 1.683E-17 2 20926 139.89 139.89 1 1.345 1.1475 0 4973100 2070300 2902700 18576 803 6993 7159 29105;29106 29106 KAEGTVFTEEDFQK 14 2 0 Unmodified _KAEGTVFTEEDFQK_ 0 0 1 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.9326 3 543.598265 1627.77297 83037.77 0.48914 0.00026589 0.047832 2.6001E-05 0.53697 0.0002919 543.598162337481 548.941014899504 61.813 0.57929 61.813 61.518 62.097 -3.8147E-06 187 46 6 0 0 0 0.019556 2 31674 22.803 22.803 1 1.2946 1.1379 0 2709600 1195200 1514500 18577 87 6994 7160 29107;29108 29108 KAEGTVFTEEDFQK 14 2 0 Unmodified _KAEGTVFTEEDFQK_ 0 0 1 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.5981 3 543.598265 1627.77297 83047.79 0.36661 0.00019929 0.10933 5.9433E-05 0.47594 0.00025872 543.598256620298 548.941124624001 62.22 0.51625 62.22 61.948 62.464 0 160 38 5 0 0 0 0.056748 1 31264 13.549 13.549 1 1.3541 1.1853 0 2211900 1021600 1190300 18578 87 6994 7160 29109 29109 KAEIDILAAEYISTVK 16 2 0 Unmodified _KAEIDILAAEYISTVK_ 0 0 1 E9PEN0;B7Z6R2;A0A1B0GW41;Q8WYH8 E9PEN0 E9PEN0 ING5 Inhibitor of growth protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.3415 3 588.664499 1762.97167 77675.39 0.78739 0.00046351 0.033828 1.9913E-05 0.82122 0.00048342 588.664113622045 594.342155830442 122.26 0.33388 122.26 122.07 122.4 -7.6294E-06 54 15 5 0 0 0 0.0021864 2 72865 34.274 34.274 1 1.304 1.1214 0 6603800 3078400 3525400 18579 633 6995 7161 29110;29111 29110 KAEIDILAAEYISTVK 16 2 0 Unmodified _KAEIDILAAEYISTVK_ 0 0 1 E9PEN0;B7Z6R2;A0A1B0GW41;Q8WYH8 E9PEN0 E9PEN0 ING5 Inhibitor of growth protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.0074 3 588.664499 1762.97167 80399.02 0.86095 0.00050681 0.87997 0.00051801 1.7409 0.0010248 588.999122814568 594.342473975557 122.08 0.32835 122.08 121.81 122.14 0 48 14 5 0 0 0 0.021378 1 71742 20.558 20.558 1 1.6872 1.4306 0 6323200 2683800 3639400 18580 633 6995 7161 29112 29112 KAELLDNEK 9 2 0 Unmodified _KAELLDNEK_ 0 0 1 Q6NVY0;A0A024R904;Q9HB71;B4DFD3 Q6NVY0 Q6NVY0 CACYBP Calcyclin-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.3026 2 530.287671 1058.56079 84063.04 0.4981 0.00026413 0.19282 0.00010225 0.69091 0.00036638 530.287804250842 538.301906653577 21.226 0.2969 21.226 21.033 21.33 0 45 13 6 0 0 0 1.644E-24 1 7541 175.93 115.04 1 5.3138 6.2867 0 15706000 2601100 13104000 18581 267 6996 7162 29113 29113 KAELLDNEK 9 2 0 Unmodified _KAELLDNEK_ 0 0 1 Q6NVY0;A0A024R904;Q9HB71;B4DFD3 Q6NVY0 Q6NVY0 CACYBP Calcyclin-binding protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.3024 2 530.287671 1058.56079 NaN NaN NaN 0.15524 8.232E-05 NaN NaN NaN NaN 20.806 0.27456 20.806 20.665 20.94 0 0 0 0 3.8781E-25 1 7073 167.67 101.05 1 NaN NaN 0 15468000 0 15468000 18582 267 6996 7162 29114 29114 KAENAEGQTPAIGPDGEPLDETSQMSDLPVK 31 2 0 Oxidation (M) _KAENAEGQTPAIGPDGEPLDETSQM(ox)SDLPVK_ KAENAEGQTPAIGPDGEPLDETSQM(1)SDLPVK KAENAEGQTPAIGPDGEPLDETSQM(54.31)SDLPVK 0 1 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1081.1783 3 1080.84527 3239.51398 59100.99 0.44968 0.00048603 -0.42857 -0.00046322 0.02111 2.2817E-05 1081.17914060775 1086.5224824764 81.097 0.53783 81.097 80.792 81.329 0 338 45 10 0 0 0 2.0444E-12 1 49385 54.311 54.311 1 0.93355 1.0792 0 34226000 16758000 17468000 18583 695 6997 7163 29115 29115 536 KAEQGSEEEGEGEEEEEEGGESK 23 2 0 Unmodified _KAEQGSEEEGEGEEEEEEGGESK_ 0 0 1 Q8NE71;B4DNU2;Q5STZ8 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.3255 3 828.000168 2480.97867 67307.22 0.26613 0.00022036 -0.014554 -1.2051E-05 0.25158 0.00020831 827.999494926662 833.677720329833 15.12 0.25675 15.12 15.057 15.313 0 16 5 7 0 0 0 3.2792E-08 1 2830 53.747 53.714 1 1.4141 1.6161 0 15455000 6853100 8601800 18584 1926 6998 7164 29116 29116 KAEQGSEEEGEGEEEEEEGGESK 23 2 0 Unmodified _KAEQGSEEEGEGEEEEEEGGESK_ 0 0 1 Q8NE71;B4DNU2;Q5STZ8 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.3442 3 828.000168 2480.97867 66589.85 0.44651 0.00036971 0.47666 0.00039467 0.92317 0.00076439 828.334731431232 833.677727667535 16.959 0.25452 16.959 16.826 17.081 0 146 18 10 0 0 0 0.030025 2 3484 12.913 12.913 1 1.0295 0.88769 0 5484500 2605200 2879300 18585 1926 6998 7164 29117;29118 29117 KAEVVQVIR 9 1 1 Unmodified _KAEVVQVIR_ 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.3245 2 521.324391 1040.63423 83491.48 0.13928 7.2608E-05 0.16647 8.6784E-05 0.30574 0.00015939 521.324417517173 530.335630601405 39.1 0.8111 39.1 38.835 39.646 0 302 66 8 0 0 0 0.0026596 1 17815 83.456 18.971 1 0.46362 0.40671 0 29822000 20117000 9705100 18586 2037 6999 7165 29119 29119 KAHLGTALK 9 2 0 Unmodified _KAHLGTALK_ 0 0 1 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 313.5308 3 313.53091 937.5709 107134.2 0.034644 1.0862E-05 1.906 0.00059759 1.9406 0.00060845 313.530888244186 318.873670569347 21.078 0.37102 21.078 20.935 21.306 0 59 17 6 0 0 0 0.0032007 2 7420 48.423 34.844 1 0.90256 1.0776 0 18639000 8260400 10379000 18587 744 7000 7166 29120;29121 29121 KAHLGTALK 9 2 0 Unmodified _KAHLGTALK_ 0 0 1 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.7927 2 469.792727 937.5709 88218.07 0.20112 9.4484E-05 -0.11912 -5.5963E-05 0.081995 3.8521E-05 469.792622116098 477.806905025644 21.108 0.24367 21.108 21.014 21.258 0 41 11 5 0 0 0 0.021876 1 7456 56.916 30.977 1 0.70415 0.79886 0 7403200 4217300 3185900 18588 744 7000 7166 29122 29122 KAHLGTALK 9 2 0 Unmodified _KAHLGTALK_ 0 0 1 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 313.5309 3 313.53091 937.5709 105795.3 0.15406 4.8301E-05 -0.045943 -1.4405E-05 0.10811 3.3897E-05 313.530821759024 318.873619162439 17.798 0.30809 17.798 17.604 17.912 0 51 11 7 0 0 0 0.0040924 2 4681 46.001 25.376 1 0.77731 0.89453 0 25627000 14319000 11308000 18589 744 7000 7166 29123;29124 29124 KAHLGTALK 9 2 0 Unmodified _KAHLGTALK_ 0 0 1 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.7928 2 469.792727 937.5709 88128.63 0.13011 6.1123E-05 0.15169 7.1262E-05 0.2818 0.00013239 469.792678602364 477.80698603169 17.771 0.2321 17.771 17.656 17.888 0 41 8 7 0 0 0 0.010882 1 4680 64.04 28.16 1 0.72645 0.83378 0 22073000 12720000 9353400 18590 744 7000 7166 29125 29125 KAPGCVLSNPDQK 13 2 0 Unmodified _KAPGCVLSNPDQK_ 0 0 1 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.3759 2 707.361376 1412.7082 74947.26 0.47395 0.00033526 0.4328 0.00030615 0.90676 0.0006414 707.361425812905 715.376181899934 24.638 0.16979 24.638 24.538 24.708 0 18 6 5 0 0 0 0.009991 1 10370 46.73 21.954 1 0.60174 0.67593 0 6509400 3375000 3134400 18591 1091 7001 7167 29126 29126 KAPGCVLSNPDQK 13 2 0 Unmodified _KAPGCVLSNPDQK_ 0 0 1 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.3618 2 707.361376 1412.7082 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.314 1 24.314 23.814 24.814 -1.9073E-06 0 0 0 0.0046641 1 10065 73.435 48.659 1 18592 1091 7001 7167 29127 29127 KAPGCVLSNPDQK 13 2 0 Unmodified _KAPGCVLSNPDQK_ 0 0 1 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.91 3 471.910009 1412.7082 88971.64 0.0077391 3.6521E-06 0.34236 0.00016156 0.3501 0.00016522 471.9099617759 477.253090567296 27.312 0.56502 27.312 26.962 27.527 1.9073E-06 85 23 7 0 0 0 0.023788 1 10059 18.336 14.028 1 0.93697 0.82137 0 2149000 1087800 1061300 18593 1091 7001 7167 29128 29128 KAPLNIPGTPVLEDFPQNDDEK 22 2 0 Unmodified _KAPLNIPGTPVLEDFPQNDDEK_ 0 0 1 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 818.7584 3 813.0797 2436.21727 67218.74 1.0556 0.0008583 -0.18128 -0.0001474 0.87433 0.0007109 813.414926094464 818.75704659911 115.91 0.61079 115.91 115.64 116.25 -7.6294E-06 138 25 9 0 0 0 9.1069E-07 2 67975 49.076 49.076 1 2.4815 2.1194 0 14477000 4252200 10225000 18594 740 7002 7168 29129;29130 29130 KAPLNIPGTPVLEDFPQNDDEK 22 2 0 Unmodified _KAPLNIPGTPVLEDFPQNDDEK_ 0 0 1 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.7565 3 813.0797 2436.21727 66547.88 0.89228 0.0007255 -0.51341 -0.00041744 0.37887 0.00030805 813.41484781374 818.756712104701 115.78 0.67155 115.78 115.45 116.12 0 124 31 6 0 0 0 0.00055003 1 66952 31.976 31.976 1 1.9884 1.678 0 8831200 3339700 5491500 18595 740 7002 7168 29131 29131 KASGPPVSELITK 13 2 0 Unmodified _KASGPPVSELITK_ 0 0 1 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8866 2 663.88501 1325.75547 75507.64 0.39853 0.00026458 1.2405 0.00082356 1.639 0.0010881 663.885200174592 671.900077908599 51.541 0.39341 51.541 51.383 51.777 0 81 31 4 0 0 0 0.0026819 1 29218 57.164 51.944 1 0.93383 1.0681 0 17049000 8993900 8054600 18596 656;1490 7003 7169 29132 29132 KATGPPVSELITK 13 2 0 Unmodified _KATGPPVSELITK_ 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.8932 2 670.892835 1339.77112 75267.14 0.35619 0.00023896 -0.42279 -0.00028365 -0.066606 -4.4686E-05 670.89266317265 678.906265207507 65.072 0.54152 65.072 64.78 65.322 0 189 40 6 0 0 0 0.012141 1 32824 45.28 36.276 1 0.49108 0.42209 0 3631100 2490500 1140600 18597 1489 7004 7170 29133 29133 KCDISLQFFLPFSLGK 16 2 0 Unmodified _KCDISLQFFLPFSLGK_ 0 0 1 P13010 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.0058 3 634.00609 1898.99644 NaN NaN NaN 0.36357 0.0002305 NaN NaN NaN NaN 133.28 0.16333 133.28 133.19 133.35 0 0 0 0 0.00071134 1 87257 49.343 39.422 1 NaN NaN 0 5564900 5564900 0 18598 1476 7005 7171 29134 29134 KCDISLQFFLPFSLGK 16 2 0 Unmodified _KCDISLQFFLPFSLGK_ 0 0 1 P13010 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3412 3 634.00609 1898.99644 NaN NaN NaN -0.010893 -6.9065E-06 NaN NaN NaN NaN 133.25 0.20522 133.25 133.13 133.34 0 0 0 0 0.00042087 1 89481 58.671 53.353 1 NaN NaN 0 18630000 18630000 0 18599 1476 7005 7171 29135 29135 KCPFTGNVSIR 11 1 1 Unmodified _KCPFTGNVSIR_ 0 0 1 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 432.8994 3 426.89229 1277.65504 91134.16 0.61227 0.00026138 -0.83932 -0.0003583 -0.22705 -9.6924E-05 426.891965834537 432.899375494781 43.7 0.64744 43.7 43.339 43.987 0 213 50 5 0 0 0 0.012945 1 23645 34.472 24.164 1 0.86564 1.0188 0 80651000 45479000 35172000 18600 1641 7006 7172 29136 29136 KCPFTGNVSIR 11 1 1 Unmodified _KCPFTGNVSIR_ 0 0 1 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.836 2 639.834797 1277.65504 NaN NaN NaN -0.46139 -0.00029521 NaN NaN NaN NaN 43.7 0.62484 43.7 43.339 43.964 -3.8147E-06 0 0 0 0.018489 1 23622 53.683 41.835 1 NaN NaN 0 27564000 27564000 0 18601 1641 7006 7172 29137 29137 KCPFTGNVSIR 11 1 1 Unmodified _KCPFTGNVSIR_ 0 0 1 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.8354 2 639.834797 1277.65504 75044.15 0.36277 0.00023211 0.70364 0.00045021 1.0664 0.00068232 639.834923608945 648.846179406964 52.095 1.0041 52.095 51.713 52.717 0 549 84 10 0 0 0 0.043371 1 25618 40.994 40.994 1 0.95481 0.82838 0 17093000 8519100 8573700 18602 1641 7006 7172 29138 29138 KCPFTGNVSIR 11 1 1 Unmodified _KCPFTGNVSIR_ 0 0 1 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.8351 2 639.834797 1277.65504 75172.73 0.39859 0.00025503 0.91615 0.00058618 1.3147 0.00084122 639.834777869593 648.846011667618 51.999 0.95819 51.999 51.632 52.59 3.8147E-06 493 75 10 0 0 0 0.032486 1 24977 44.309 39.526 1 1.0386 0.8789 0 11750000 5083800 6666200 18603 1641 7006 7172 29139 29139 KDDAITAYK 9 2 0 Unmodified _KDDAITAYK_ 0 0 1 Q96DI9;F6VRR5;B4E0L0;Q9BY77;B4DMM2 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.7684 2 512.769114 1023.52368 87489.03 0.72055 0.00036947 0.038254 1.9615E-05 0.7588 0.00038909 512.769073055131 520.783086449227 22.345 0.29513 22.345 22.248 22.543 1.9073E-06 61 18 5 0 0 0 0.025314 1 8468 55.064 30.909 1 0.67852 0.75618 0 5876500 2494600 3382000 18604 1063 7007 7173 29140 29140 KDDEVQVVR 9 1 1 Unmodified _KDDEVQVVR_ 0 0 1 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.2924 2 544.290745 1086.56694 81883.27 0.54815 0.00029836 -0.13124 -7.1435E-05 0.41691 0.00022692 544.290591440196 553.301860354032 22.493 0.57017 22.493 22.298 22.869 0 184 35 7 0 0 0 1.9907E-103 2 8508 255.84 226.69 1 0.70581 0.85189 0 147260000 85532000 61731000 18605 1629;1214 7008 7174 29141;29142 29142 KDDEVQVVR 9 1 1 Unmodified _KDDEVQVVR_ 0 0 1 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.2909 2 544.290745 1086.56694 81098.21 0.26994 0.00014692 0.36591 0.00019916 0.63584 0.00034608 544.290951658891 553.302154688164 22.096 0.56992 22.096 21.866 22.436 0 123 24 8 0 0 0 3.2492E-58 2 8073 220.71 220.71 1 0.67549 0.80114 0 275810000 170850000 104960000 18606 1629;1214 7008 7174 29143;29144 29144 KDDEVQVVR 9 1 1 Unmodified _KDDEVQVVR_ 0 0 1 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.291 2 544.290745 1086.56694 82128.94 0.53468 0.00029102 -0.083286 -4.5332E-05 0.45139 0.00024569 544.290755420074 553.301900032029 24.244 0.91672 24.244 23.919 24.836 0 236 51 9 0 0 0 0.0094088 2 8397 66.27 55.856 1 0.61799 0.55126 0 68901000 43122000 25779000 18607 1629;1214 7008 7174 29145;29146 29145 KDDEVQVVR 9 1 1 Unmodified _KDDEVQVVR_ 0 0 1 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.291 2 544.290745 1086.56694 81173.07 0.44936 0.00024458 -0.050181 -2.7313E-05 0.39918 0.00021727 544.290805794599 553.301845945944 24.073 1.0295 24.073 23.813 24.843 0 298 57 9 0 0 0 0.013191 1 7771 61.593 51.179 1 0.59246 0.50457 0 43869000 27960000 15909000 18608 1629;1214 7008 7174 29147 29147 KDDFLGAAEGK 11 2 0 Unmodified _KDDFLGAAEGK_ 0 0 1 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.7913 2 575.790578 1149.5666 78659.11 0.49485 0.00028493 -0.43672 -0.00025146 0.058128 3.347E-05 575.79111596718 583.804832588201 43.827 1.3884 43.827 42.853 44.242 0 247 93 6 0 0 0 0.036864 1 20717 42.976 36.873 1 1.4469 1.2461 0 5989500 2478500 3510900 18609 1233 7009 7175 29148 29148 KDDINLLPSK 10 2 0 Unmodified _KDDINLLPSK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.8247 2 571.824421 1141.63429 81646.49 0.70088 0.00040078 -0.12364 -7.07E-05 0.57724 0.00033008 571.824273589121 579.838356149866 53.413 0.77858 53.413 52.999 53.778 0 253 60 6 0 0 0 2.3882E-16 2 29776 159.83 138.96 1 0.67283 0.79409 0 97873000 54704000 43169000 18610 1837 7010 7176 29149;29150 29150 KDDINLLPSK 10 2 0 Unmodified _KDDINLLPSK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.8248 2 571.824421 1141.63429 82074.05 0.55212 0.00031572 0.16891 9.6588E-05 0.72104 0.00041231 571.82450975506 579.838487873982 51.526 0.73058 51.526 51.034 51.765 0 279 58 7 0 0 0 8.5952E-10 1 29015 135.8 115.38 1 0.60047 0.69679 0 87629000 56514000 31114000 18611 1837 7010 7176 29151 29151 KDDINLLPSK 10 2 0 Unmodified _KDDINLLPSK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.8242 2 571.824421 1141.63429 84188.52 0.39688 0.00022694 0.22251 0.00012724 0.61939 0.00035418 571.824393787469 579.838654885045 60.489 0.61481 60.489 60.168 60.783 -3.8147E-06 216 53 5 0 0 0 0.010845 1 30972 58.743 52.152 1 0.97471 0.84063 0 5380600 2884100 2496500 18612 1837 7010 7176 29152 29152 KDDINLLPSK 10 2 0 Unmodified _KDDINLLPSK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.8243 2 571.824421 1141.63429 84160.5 0.36025 0.000206 0.42673 0.00024402 0.78698 0.00045002 571.824510851465 579.838732260395 60.765 0.62475 60.765 60.392 61.016 3.8147E-06 219 51 6 0 0 0 0.015721 1 30424 54.784 54.784 1 0.926 0.78981 0 5024100 2565600 2458500 18613 1837 7010 7176 29153 29153 KDEDLFR 7 1 1 Unmodified _KDEDLFR_ 0 0 1 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.7353 2 461.735074 921.455596 87072.09 -0.39308 -0.0001815 0.078317 3.6162E-05 -0.31476 -0.00014533 461.735130852876 470.746270778373 29.213 0.50178 29.213 29.086 29.588 1.9073E-06 136 37 7 0 0 0 8.1195E-25 2 14045 189.78 69.131 1 0.83969 1.0283 0 1405400000 760120000 645320000 18614 181 7011 7177 29154;29155 29154 KDEDLFR 7 1 1 Unmodified _KDEDLFR_ 0 0 1 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.7357 2 461.735074 921.455596 89100.31 0.23957 0.00011062 -0.032879 -1.5181E-05 0.20669 9.5436E-05 461.735046051122 470.746177321212 28.351 0.82611 28.351 27.962 28.788 0 176 60 6 0 0 0 1.3676E-60 1 13475 230.85 81.449 1 0.82238 0.98424 0 1167600000 645950000 521650000 18615 181 7011 7177 29156 29156 KDENESSAPADGEGGSELQPK 21 2 0 Unmodified _KDENESSAPADGEGGSELQPK_ 0 0 1 Q15554;H3BR06;U3KQ35;J3KSZ6 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.3362 3 715.65746 2143.95055 72717.86 0.53049 0.00037965 0.60594 0.00043365 1.1364 0.00081329 715.658096180073 721.000293188916 25.15 0.26316 25.15 25.011 25.274 0 41 11 7 0 0 0 1.8311E-05 2 10795 41.166 41.166 1 1.5585 1.8002 0 9892800 3825500 6067300 18616 1762 7012 7178 29157;29158 29157 KDENESSAPADGEGGSELQPK 21 2 0 Unmodified _KDENESSAPADGEGGSELQPK_ 0 0 1 Q15554;H3BR06;U3KQ35;J3KSZ6 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.3347 3 715.65746 2143.95055 72208 0.54204 0.00038791 0.49043 0.00035098 1.0325 0.00073889 715.657230181895 721.335208225171 24.914 0.3102 24.914 24.773 25.084 0 46 12 6 0 0 0 7.2955E-09 3 10576 75.054 71.956 1 1.0681 1.2188 0 12531000 5178500 7352600 18617 1762 7012 7178 29159;29160;29161 29160 KDENESSAPADGEGGSELQPK 21 2 0 Unmodified _KDENESSAPADGEGGSELQPK_ 0 0 1 Q15554;H3BR06;U3KQ35;J3KSZ6 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.6581 3 715.65746 2143.95055 72712.77 0.58147 0.00041613 -0.41971 -0.00030037 0.16175 0.00011576 715.991769283894 721.333928421154 28.761 0.38686 28.761 28.548 28.935 0 136 28 7 0 0 0 0.032044 2 11569 13.188 5.1866 1 1.5817 1.3689 0 3761700 1287200 2474500 18618 1762 7012 7178 29162;29163 29163 KDENESSAPADGEGGSELQPK 21 2 0 Unmodified _KDENESSAPADGEGGSELQPK_ 0 0 1 Q15554;H3BR06;U3KQ35;J3KSZ6 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.001 3 715.65746 2143.95055 73220.95 0.29267 0.00020945 0.14167 0.00010139 0.43434 0.00031084 715.99203295601 721.000327773198 29.126 0.42894 29.126 28.894 29.323 -1.9073E-06 113 26 6 0 0 0 0.024843 2 11228 15.812 12.207 1 1.5761 1.3634 0 2825100 1279200 1545900 18619 1762 7012 7178 29164;29165 29164 KDGNASGTTLLEALDCILPPTRPTDK 26 2 1 Unmodified _KDGNASGTTLLEALDCILPPTRPTDK_ 0 0 2 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q6P4C9;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.8621 4 696.611554 2782.41711 71549.34 0.75538 0.00052621 -0.50602 -0.0003525 0.24936 0.00017371 696.861808836787 703.370947531047 131.78 0.49403 131.78 131.48 131.98 0 135 23 11 0 0 0 3.1384E-06 3 80020 43.494 43.494 1 2.2743 2.3561 0 5919100 1848900 4070100 18620 1658;1790 7013 7179 29166;29167;29168 29168 KDGNASGTTLLEALDCILPPTRPTDK 26 2 1 Unmodified _KDGNASGTTLLEALDCILPPTRPTDK_ 0 0 2 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q6P4C9;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.8633 4 696.611554 2782.41711 72748.23 0.91511 0.00063747 0.13023 9.0719E-05 1.0453 0.00072819 696.862324594202 703.121309792542 131.45 0.3933 131.45 131.26 131.65 0 78 15 7 0 0 0 0.038566 1 78939 17.076 14.602 1 1.5729 1.5313 0 7032600 2379200 4653400 18621 1658;1790 7013 7179 29169 29169 KDPGVPNSAPFK 12 2 0 Unmodified _KDPGVPNSAPFK_ 0 0 1 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.8362 2 628.83532 1255.65609 77188.85 0.63106 0.00039683 -0.042486 -2.6716E-05 0.58857 0.00037012 628.835426419436 636.849812790332 39.444 0.31307 39.444 39.324 39.637 0 95 26 5 0 0 0 0.00076881 1 20462 70.675 59.454 1 0.98146 1.1695 0 21496000 10653000 10844000 18622 125 7014 7180 29170 29170 KDPGVPNSAPFK 12 2 0 Unmodified _KDPGVPNSAPFK_ 0 0 1 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 419.5591 3 419.559305 1255.65609 91395.45 -0.29986 -0.00012581 0.037823 1.5869E-05 -0.26204 -0.00010994 419.559027160671 424.902108431688 45.124 0.55104 45.124 44.949 45.501 0 169 39 8 0 0 0 0.021597 2 21528 21.246 21.246 1 1.186 1.0177 0 7747100 3768300 3978800 18623 125 7014 7180 29171;29172 29172 KDPGVPNSAPFK 12 2 0 Unmodified _KDPGVPNSAPFK_ 0 0 1 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.8356 2 628.83532 1255.65609 74860.31 0.48997 0.00030811 -0.030284 -1.9044E-05 0.45969 0.00028907 628.835334837127 636.849539093342 45.132 0.59264 45.132 44.923 45.515 0 197 42 7 0 0 0 0.00054528 2 21543 72.652 63.438 1 1.1783 1.0062 0 15001000 6527600 8473000 18624 125 7014 7180 29173;29174 29174 KDPGVPNSAPFK 12 2 0 Unmodified _KDPGVPNSAPFK_ 0 0 1 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 424.9023 3 419.559305 1255.65609 90052.43 -0.07396 -3.103E-05 -0.075412 -3.164E-05 -0.14937 -6.267E-05 419.559050552604 424.902074979555 45.095 0.62876 45.095 44.83 45.459 0 188 44 6 0 0 0 0.02426 2 20909 24.964 24.964 1 1.044 0.89437 0 4205900 2156200 2049700 18625 125 7014 7180 29175;29176 29175 KDPSLPVASSSSSSSK 16 2 0 Unmodified _KDPSLPVASSSSSSSK_ 0 0 1 D2CPI8 D2CPI8 D2CPI8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.2766 3 521.933537 1562.77878 83875.11 0.32313 0.00016865 -0.65526 -0.000342 -0.33213 -0.00017335 522.268126728419 527.275878871372 31.773 0.62736 31.773 31.357 31.985 -1.9073E-06 103 33 6 0 0 0 0.062073 1 13031 9.7575 4.4785 1 0.58308 0.51251 0 1942600 974980 967640 18626 1184 7015 7181 29177 29177 KEDALLYQSK 10 2 0 Unmodified _KEDALLYQSK_ 0 0 1 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.8218 2 597.821878 1193.6292 77314.96 0.36216 0.0002165 -0.0068471 -4.0934E-06 0.35531 0.00021241 597.821732379248 605.836082277283 29.159 0.28191 29.159 29.023 29.305 1.9073E-06 85 16 7 0 0 0 9.829E-152 2 14019 281.88 169.47 1 0.71035 0.83832 0 111520000 64129000 47390000 18627 1590 7016 7182 29178;29179 29178 KEDALLYQSK 10 2 0 Unmodified _KEDALLYQSK_ 0 0 1 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.8228 2 597.821878 1193.6292 78241.76 0.56332 0.00033676 -0.05473 -3.2719E-05 0.50859 0.00030405 597.82173184055 605.835977702196 28.3 0.34042 28.3 28.149 28.489 0 85 19 7 0 0 0 2.2215E-131 2 13479 275.13 138.86 1 0.5745 0.66746 0 119140000 76243000 42895000 18628 1590 7016 7182 29180;29181 29180 KEDALLYQSK 10 2 0 Unmodified _KEDALLYQSK_ 0 0 1 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.8361 2 597.821878 1193.6292 77773.86 0.28703 0.00017159 -1.0208 -0.00061027 -0.7338 -0.00043868 597.821767944615 605.834682937121 32.927 0.41181 32.927 32.694 33.106 0 93 23 7 0 0 0 2.4153E-09 2 14362 131.83 85.825 1 0.71807 0.61172 0 23661000 13456000 10205000 18629 1590 7016 7182 29182;29183 29183 KEDALLYQSK 10 2 0 Unmodified _KEDALLYQSK_ 0 0 1 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.8222 2 597.821878 1193.6292 77133.23 0.47915 0.00028644 -0.52173 -0.0003119 -0.042584 -2.5458E-05 597.821683691975 605.83572097591 32.931 0.44254 32.931 32.637 33.08 0 75 20 6 0 0 0 9.8963E-06 1 13858 108.3 54.335 1 0.69737 0.59077 0 17040000 10025000 7014700 18630 1590 7016 7182 29184 29184 KEDGFEDGVEDNK 13 2 0 Unmodified _KEDGFEDGVEDNK_ 0 0 1 Q14191 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.3229 2 741.323167 1480.63178 70870.46 0.41793 0.00030982 -0.0081862 -6.0686E-06 0.40974 0.00030375 741.322501311268 749.337314496346 24.642 0.24378 24.642 24.508 24.752 1.9073E-06 28 8 5 0 0 0 0.0013142 1 10404 60.49 60.49 1 1.1141 1.2796 0 8840400 4238200 4602200 18631 1728 7017 7183 29185 29185 KEDGFEDGVEDNK 13 2 0 Unmodified _KEDGFEDGVEDNK_ 0 0 1 Q14191 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.3228 2 741.323167 1480.63178 70939.73 0.3825 0.00028355 -0.19465 -0.0001443 0.18785 0.00013926 741.323050368839 749.336965052948 24.265 0.33144 24.265 24.053 24.384 0 35 12 5 0 0 0 9.2568E-14 2 10037 135.58 124.36 1 0.81542 0.92925 0 7660400 4074300 3586000 18632 1728 7017 7183 29186;29187 29187 KEDINLSVR 9 1 1 Unmodified _KEDINLSVR_ 0 0 1 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.3124 2 537.301113 1072.58767 82240.38 0.76848 0.00041291 0.2466 0.0001325 1.0151 0.0005454 537.300667234219 546.312761356328 38.397 0.48486 38.397 38.106 38.591 0 146 40 5 0 0 0 0.00047966 3 19685 103.42 69.107 1 1.5048 1.8004 0 55339000 19549000 35789000 18633 1763 7018 7184 29188;29189;29190 29189 KEDINLSVR 9 1 1 Unmodified _KEDINLSVR_ 0 0 1 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.3014 2 537.301113 1072.58767 82546.81 0.64025 0.00034401 0.43056 0.00023134 1.0708 0.00057535 537.301818322637 546.312229399934 36.926 0.41439 36.926 36.643 37.057 0 142 29 6 0 0 0 0.002164 1 19058 87.308 63.153 1 1.8066 2.1193 0 58034000 20883000 37151000 18634 1763 7018 7184 29191 29191 KEDLEFQAK 9 2 0 Unmodified _KEDLEFQAK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPJ1;D2CPJ3;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.301 2 554.287671 1106.56079 80404.76 0.64007 0.00035478 0.01058 5.8644E-06 0.65065 0.00036065 554.286895611936 562.301215758203 29.057 0.28063 29.057 28.924 29.205 0 58 14 8 0 0 0 3.8828E-06 1 13997 135.55 96.002 1 0.81439 0.9612 0 88406000 51376000 37031000 18635 118;1184 7019 7185 29192 29192 KEDLEFQAK 9 2 0 Unmodified _KEDLEFQAK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPJ1;D2CPJ3;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.3022 2 554.287671 1106.56079 81611.76 0.58525 0.0003244 0.88644 0.00049134 1.4717 0.00081574 554.287420001927 562.301953793282 28.178 0.32165 28.178 28.095 28.416 0 43 16 8 0 0 0 4.0064E-05 2 13423 114.86 79.706 1 0.5734 0.66508 0 78489000 50762000 27726000 18636 118;1184 7019 7185 29193;29194 29194 KEDLEFQAK 9 2 0 Unmodified _KEDLEFQAK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPJ1;D2CPJ3;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.288 2 554.287671 1106.56079 79069.79 0.2041 0.00011313 0.39415 0.00021847 0.59825 0.0003316 554.287914376293 562.301927703652 32.853 0.24197 32.853 32.694 32.936 0 56 11 7 0 0 0 0.0023091 1 14294 86.18 45.402 1 0.93234 0.79284 0 33425000 18288000 15137000 18637 118;1184 7019 7185 29195 29195 KEDLEFQAK 9 2 0 Unmodified _KEDLEFQAK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPJ1;D2CPJ3;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.2878 2 554.287671 1106.56079 80566.77 0.48449 0.00026855 -0.12178 -6.75E-05 0.36271 0.00020105 554.287616538114 562.301670294916 32.84 0.24614 32.84 32.715 32.961 0 39 9 7 0 0 0 4.2731E-17 1 13795 166.07 111.46 1 0.87266 0.74097 0 25226000 13217000 12009000 18638 118;1184 7019 7185 29196 29196 KEDLYLK 7 2 0 Unmodified _KEDLYLK_ 0 0 1 P13639;Q8TA90;Q6PK56;B4DRE8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 462.7725 2 454.758018 907.501483 90404 0.039813 1.8105E-05 0.030398 1.3824E-05 0.070212 3.1929E-05 454.757952974495 462.772215186258 31.311 0.50811 31.311 31.11 31.618 -1.9073E-06 99 25 7 0 0 0 0.051352 1 12688 68.383 35.773 1 2.3174 1.9995 0 3054200 910160 2144100 18639 1478 7020 7186 29197 29197 KEEELQAALAR 11 1 1 Unmodified _KEEELQAALAR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q99529;Q7Z7R0;A0A0C4DFM8;Q7Z406 A0A024R1N1;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.856 2 629.343509 1256.67246 76794.53 0.39759 0.00025022 -0.048106 -3.0275E-05 0.34948 0.00021994 629.343338554219 638.354851553912 39.801 0.58672 39.801 39.569 40.156 0 246 48 8 0 0 0 1.0117E-07 2 20600 115.78 94.318 1 1.7075 2.0652 0 203560000 77896000 125670000 18640 81;1875 7021 7187 29198;29199 29198 KEEELQAALAR 11 1 1 Unmodified _KEEELQAALAR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q99529;Q7Z7R0;A0A0C4DFM8;Q7Z406 A0A024R1N1;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.9055 3 419.898098 1256.67246 94407.06 -0.079633 -3.3438E-05 0.060997 2.5613E-05 -0.018636 -7.8252E-06 419.898214253801 425.905653115406 39.788 0.37474 39.788 39.628 40.002 0 139 30 8 0 0 0 8.6651E-05 2 20702 65.348 54.442 1 1.6043 1.8731 0 31419000 11215000 20205000 18641 81;1875 7021 7187 29200;29201 29200 KEEELQAALAR 11 1 1 Unmodified _KEEELQAALAR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q99529;Q7Z7R0;A0A0C4DFM8;Q7Z406 A0A024R1N1;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3544 2 629.343509 1256.67246 76170.39 0.52365 0.00032955 -0.085698 -5.3933E-05 0.43795 0.00027562 629.343587559684 638.354689833864 38.321 0.51189 38.321 38.09 38.602 0 246 41 8 0 0 0 2.5541E-32 2 20043 188.28 178.84 1 1.6529 1.962 0 315300000 130680000 184620000 18642 81;1875 7021 7187 29202;29203 29202 KEEELQAALAR 11 1 1 Unmodified _KEEELQAALAR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q99529;Q7Z7R0;A0A0C4DFM8;Q7Z406 A0A024R1N1;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.9055 3 419.898098 1256.67246 90420.01 0.00058398 2.4521E-07 -0.1114 -4.6778E-05 -0.11082 -4.6533E-05 419.898250323102 425.90565481503 38.324 0.37907 38.324 38.12 38.499 0 109 30 5 0 0 0 0.0053659 1 20164 35.645 25.958 1 1.6193 1.8923 0 49388000 15875000 33512000 18643 81;1875 7021 7187 29204 29204 KEEELQAALAR 11 1 1 Unmodified _KEEELQAALAR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q99529;Q7Z7R0;A0A0C4DFM8;Q7Z406 A0A024R1N1;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.3552 2 629.343509 1256.67246 75883.8 0.46256 0.00029111 -0.06972 -4.3878E-05 0.39284 0.00024723 629.343201387315 638.354779914152 45.457 0.82876 45.457 45.023 45.852 3.8147E-06 277 60 8 0 0 0 0.00051561 2 21662 88.134 67.434 1 2.72 2.3787 0 25481000 6606500 18875000 18644 81;1875 7021 7187 29205;29206 29205 KEEENASVIDSAELQAYPALVVEK 24 2 0 Unmodified _KEEENASVIDSAELQAYPALVVEK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 878.4509 3 878.116591 2631.32794 64739.86 0.81268 0.00071363 -0.32662 -0.00028681 0.48606 0.00042681 878.450387001908 883.792610346516 117.96 0.43515 117.96 117.72 118.16 0 86 18 6 0 0 0 0.0001616 1 69543 35.016 32.474 1 0.4271 0.36528 0 11076000 7878600 3197600 18645 1665 7022 7188 29207 29207 KEEENASVIDSAELQAYPALVVEK 24 2 0 Unmodified _KEEENASVIDSAELQAYPALVVEK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 878.4521 3 878.116591 2631.32794 NaN NaN NaN 0.76179 0.00066894 NaN NaN NaN NaN 117.75 0.42353 117.75 117.56 117.98 0 0 0 0 0.031959 1 68488 24.068 21.306 1 NaN NaN 0 5402700 5402700 0 18646 1665 7022 7188 29208 29208 KEEILLIK 8 2 0 Unmodified _KEEILLIK_ 0 0 1 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.3325 2 493.318243 984.621933 NaN NaN NaN 0.40997 0.00020225 NaN NaN NaN NaN 56.35 0.36683 56.35 56.118 56.485 0 0 0 0 0.011858 1 32361 74.92 22.438 1 NaN NaN 0 4801700 0 4801700 18647 1259 7023 7189 29209 29209 KEELTLEGIR 10 1 1 Unmodified _KEELTLEGIR_ 0 0 1 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;B4DNH2;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.3464 2 594.335153 1186.65575 78622.88 0.77172 0.00045866 0.13415 7.9729E-05 0.90587 0.00053839 594.335243735339 603.346334176111 57.248 1.2101 57.248 56.934 58.144 0 478 94 8 0 0 0 2.5176E-06 4 32712 111.61 82.52 1 1.8444 2.2241 0 127870000 41073000 86797000 18648 770 7024 7190 29210;29211;29212;29213 29213 KEELTLEGIR 10 1 1 Unmodified _KEELTLEGIR_ 0 0 1 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;B4DNH2;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 402.7162 3 396.559194 1186.65575 96637.36 0.13247 5.253E-05 0.065731 2.6066E-05 0.1982 7.8597E-05 396.55916335271 402.566708998704 57.481 0.83949 57.481 57.063 57.903 0 129 62 4 0 0 0 0.045844 1 32564 19.659 5.8496 1 1.9367 2.1024 0 9978300 3895300 6083000 18649 770 7024 7190 29214 29214 KEELTLEGIR 10 1 1 Unmodified _KEELTLEGIR_ 0 0 1 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;B4DNH2;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.3466 2 594.335153 1186.65575 78731.76 0.49082 0.00029171 -0.066875 -3.9746E-05 0.42395 0.00025197 594.335031712132 603.346318989227 55.652 0.95504 55.652 55.297 56.252 0 372 74 9 0 0 0 1.2698E-51 2 31815 205.53 110.17 1 1.762 2.0891 0 261820000 97179000 164640000 18650 770 7024 7190 29215;29216 29215 KEELTLEGIR 10 1 1 Unmodified _KEELTLEGIR_ 0 0 1 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;B4DNH2;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.3465 2 594.335153 1186.65575 78770.95 0.65 0.00038632 0.021217 1.261E-05 0.67121 0.00039893 594.335192739535 603.346276627887 66.437 0.83499 66.437 66.026 66.861 0 218 46 7 0 0 0 0.00021856 2 34376 96.342 68.6 1 1.3135 1.1392 0 16827000 7538300 9289000 18651 770 7024 7190 29217;29218 29217 KEELTLEGIR 10 1 1 Unmodified _KEELTLEGIR_ 0 0 1 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;B4DNH2;J3KSZ0;J3KTN0;B4DKP9 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.3469 2 594.335153 1186.65575 78709.54 0.49085 0.00029173 0.037922 2.2538E-05 0.52877 0.00031427 594.335199662344 603.346340696977 66.588 0.77317 66.588 66.239 67.012 0 274 48 7 0 0 0 2.5335E-05 1 33687 101.38 74.867 1 1.403 1.1892 0 16388000 6630300 9757300 18652 770 7024 7190 29219 29219 KEELVAEQALK 11 2 0 Unmodified _KEELVAEQALK_ 0 0 1 B5MCE7;B5MCH7;B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2 B5MCE7 B5MCE7 BZW2 Basic leucine zipper and W2 domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.371 2 629.356085 1256.69762 77863.72 0.90398 0.00056892 0.50333 0.00031677 1.4073 0.00088569 629.355856108243 637.370967564446 38.636 0.41119 38.636 38.431 38.842 -3.8147E-06 117 34 6 0 0 0 6.0219E-10 2 19864 132.32 0 1 3.0702 3.6548 0 17621000 4407200 13214000 18653 293 7025 7191 29220;29221 29220 KEELVAEQALK 11 2 0 Unmodified _KEELVAEQALK_ 0 0 1 B5MCE7;B5MCH7;B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2 B5MCE7 B5MCE7 BZW2 Basic leucine zipper and W2 domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.3708 2 629.356085 1256.69762 78668.84 0.80047 0.00050378 0.048994 3.0835E-05 0.84947 0.00053462 629.356054577101 637.370239753819 37.088 0.35707 37.088 36.937 37.294 0 102 29 5 0 0 0 1.6771E-22 2 19183 163.78 0 1 2.5613 2.9303 0 17637000 4322100 13315000 18654 293 7025 7191 29222;29223 29222 KEENSTEEQALEDQNAK 17 2 0 Unmodified _KEENSTEEQALEDQNAK_ 0 0 1 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.3115 3 654.967746 1961.88141 78065.61 0.57331 0.0003755 0.15996 0.00010477 0.73327 0.00048027 655.302551946385 660.310924999777 22.636 0.23697 22.636 22.496 22.733 0 38 15 4 0 0 0 0.013375 1 8693 14.041 14.041 1 0.87388 0.96802 0 5020100 2006400 3013700 18655 2063 7026 7192 29224 29224 KEEPEPETEAVSSSQEIPTMPQPIEK 26 2 0 Oxidation (M) _KEEPEPETEAVSSSQEIPTM(ox)PQPIEK_ KEEPEPETEAVSSSQEIPTM(1)PQPIEK KEEPEPETEAVSSSQEIPTM(55.53)PQPIEK 0 1 1 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 976.4669 3 976.133981 2925.38011 61931.38 0.28238 0.00027564 -0.084565 -8.2547E-05 0.19782 0.0001931 976.468062001368 981.810887159658 69.234 0.45575 69.234 69.01 69.466 7.6294E-06 236 38 8 0 0 0 8.962E-10 2 41173 55.526 52.484 1 1.918 2.2131 0 29747000 7874800 21872000 18656 1758 7027 7193 29225;29226 29226 1627 KEEPEPETEAVSSSQEIPTMPQPIEK 26 2 0 Unmodified _KEEPEPETEAVSSSQEIPTMPQPIEK_ 0 0 1 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 976.4797 3 970.802343 2909.3852 60442.61 0.1069 0.00010378 0.2897 0.00028125 0.39661 0.00038503 971.472030471383 976.47990514935 97.638 0.43617 97.638 97.367 97.803 0 108 25 7 0 0 0 0.028121 1 54946 13.887 13.887 1 1.5842 1.3802 0 3218000 1444900 1773100 18657 1758 7027 7194 29227 29227 KEEPEPETEAVSSSQEIPTMPQPIEK 26 2 0 Unmodified _KEEPEPETEAVSSSQEIPTMPQPIEK_ 0 0 1 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 976.4786 3 970.802343 2909.3852 61518.29 -0.05245 -5.0918E-05 0.43137 0.00041877 0.37892 0.00036785 971.472977643704 976.479266094898 97.427 0.42858 97.427 97.188 97.616 0 100 20 8 0 0 0 0.015258 1 54020 18.776 15.734 1 2.2643 1.9526 0 3131700 1034600 2097000 18658 1758 7027 7194 29228 29228 KEEQEVQATLESEEVDLNAGLHGNWTLENAK 31 2 0 Unmodified _KEEQEVQATLESEEVDLNAGLHGNWTLENAK_ 0 0 1 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 875.4318 4 871.173398 3480.66449 NaN NaN NaN 0.06635 5.7802E-05 NaN NaN NaN NaN 119.02 0.28183 119.02 118.88 119.17 0 0 0 0 0.017138 1 69535 23.983 21.845 1 NaN NaN 0 6196800 0 6196800 18659 1691 7028 7195 29229 29229 KEESEESDDDMGFGLFD 17 1 0 Oxidation (M) _KEESEESDDDM(ox)GFGLFD_ KEESEESDDDM(1)GFGLFD KEESEESDDDM(41.4)GFGLFD 0 1 1 A0A024RCA7;P05387;H0YDD8;Q6ICQ4;Q6FG99;A0A024R608;P05386 A0A024RCA7;Q6ICQ4 A0A024RCA7 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 987.389 2 983.38075 1964.74695 61718.14 0.80625 0.00079285 -0.2982 -0.00029325 0.50805 0.00049961 983.882051887123 987.387722784545 96.235 1.1067 96.235 95.641 96.748 0 627 96 10 0 0 0 0.0031355 1 58783 41.401 41.401 1 1.5356 1.7417 0 95345000 40810000 54535000 18660 356;195 7029 7196 29230 29230 157 KEESEESDDDMGFGLFD 17 1 0 Oxidation (M) _KEESEESDDDM(ox)GFGLFD_ KEESEESDDDM(1)GFGLFD KEESEESDDDM(85.54)GFGLFD 0 1 1 A0A024RCA7;P05387;H0YDD8;Q6ICQ4;Q6FG99;A0A024R608;P05386 A0A024RCA7;Q6ICQ4 A0A024RCA7 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 987.3885 2 983.38075 1964.74695 61775.64 0.70743 0.00069567 -0.41961 -0.00041264 0.28782 0.00028304 983.380526761691 987.889002340172 95.434 1.1583 95.434 94.931 96.09 7.6294E-06 638 97 9 0 0 0 2.5062E-05 1 59678 85.536 85.536 1 1.5975 1.786 0 104830000 38845000 65988000 18661 356;195 7029 7196 29231 29231 157 KEETQPPVALK 11 2 0 Unmodified _KEETQPPVALK_ 0 0 1 Q63HR1;Q5VU21;D3DQ69;Q8NC51;D3DQ70 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.3661 2 620.350803 1238.68705 76377.48 0.56769 0.00035217 0.19888 0.00012338 0.76657 0.00047554 620.350918900557 628.364986229841 31.712 0.59233 31.712 31.364 31.957 0 214 56 5 0 0 0 2.2353E-05 2 15518 107.51 80.625 1 1.859 2.195 0 40649000 14946000 25703000 18662 1832 7030 7197 29232;29233 29232 KEETQPPVALK 11 2 0 Unmodified _KEETQPPVALK_ 0 0 1 Q63HR1;Q5VU21;D3DQ69;Q8NC51;D3DQ70 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.351 2 620.350803 1238.68705 76017 0.64284 0.00039879 0.093506 5.8006E-05 0.73634 0.00045679 620.351127618611 628.364775839775 30.782 0.60933 30.782 30.576 31.186 0 197 52 6 0 0 0 2.9797E-12 2 15127 147.3 104.97 1 2.0084 2.3247 0 46839000 12162000 34678000 18663 1832 7030 7197 29234;29235 29235 KEGDLIAAQAR 11 1 1 Unmodified _KEGDLIAAQAR_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.3362 2 586.325119 1170.63569 78290.25 0.88998 0.00052182 0.39387 0.00023094 1.2839 0.00075276 586.325462567409 595.336521061779 27.291 0.4016 27.291 27.065 27.467 0 73 19 7 0 0 0 5.3017E-05 1 12490 117.52 95.283 1 1.1636 1.3491 0 29433000 13516000 15917000 18664 1440 7031 7198 29236 29236 KEGDLIAAQAR 11 1 1 Unmodified _KEGDLIAAQAR_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.325 2 586.325119 1170.63569 78184.73 0.65968 0.00038678 -0.061142 -3.5849E-05 0.59853 0.00035094 586.32510100387 595.336146587773 26.581 0.31737 26.581 26.468 26.786 0 69 15 7 0 0 0 3.7832E-08 2 11974 121.83 100.96 1 1.2982 1.5244 0 60391000 24243000 36148000 18665 1440 7031 7198 29237;29238 29237 KEGDLIAAQAR 11 1 1 Unmodified _KEGDLIAAQAR_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 391.2194 3 391.219172 1170.63569 95337.47 0.26905 0.00010526 -0.27135 -0.00010616 -0.0023026 -9.0084E-07 391.219013851898 397.226480509746 26.596 0.23828 26.596 26.485 26.723 1.9073E-06 42 11 5 0 0 0 1.0279E-05 2 12001 81.525 51.319 1 1.3337 1.5275 0 22821000 8690800 14131000 18666 1440 7031 7198 29239;29240 29240 KEGEEQPVLPEETESSK 17 2 0 Unmodified _KEGEEQPVLPEETESSK_ 0 0 1 E7EMW7;O95071 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.652 3 639.30922 1914.90583 NaN NaN NaN 0.31166 0.00019925 NaN NaN NaN NaN 36.277 0.18969 36.277 36.154 36.344 0 0 0 0 0.030277 1 18632 26.837 17.08 1 NaN NaN 0 4391200 0 4391200 18667 1218 7032 7199 29241 29241 KEPLYVGVDDDK 12 2 0 Unmodified _KEPLYVGVDDDK_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.3636 2 689.348457 1376.68236 73221.48 0.52071 0.00035895 0.67559 0.00046571 1.1963 0.00082466 689.850572530918 697.362997503563 43.875 0.51196 43.875 43.747 44.259 0 179 47 6 0 0 0 6.9585E-05 2 23665 99.215 99.215 1 1.1262 1.3305 0 32927000 15622000 17306000 18668 303 7033 7200 29242;29243 29243 KEPLYVGVDDDK 12 2 0 Unmodified _KEPLYVGVDDDK_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3704 2 689.348457 1376.68236 73459.18 0.91727 0.00063232 0.065491 4.5146E-05 0.98276 0.00067746 689.34880628374 697.362516648422 42.619 0.63068 42.619 42.302 42.933 3.8147E-06 218 50 7 0 0 0 0.0077571 1 22936 58.32 58.32 1 1.2224 1.4195 0 105510000 46259000 59255000 18669 303 7033 7200 29244 29244 KEPLYVGVDDDK 12 2 0 Unmodified _KEPLYVGVDDDK_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.3488 2 689.348457 1376.68236 74078.77 0.41283 0.00028459 0.45587 0.00031425 0.8687 0.00059884 689.34872403993 697.362827022708 50.136 0.84543 50.136 49.802 50.647 0 301 70 8 0 0 0 0.030908 1 24498 40.767 40.767 1 2.5941 2.2131 0 17887000 5397100 12490000 18670 303 7033 7200 29245 29245 KESYSIYVYK 10 2 0 Unmodified _KESYSIYVYK_ 0 0 1 Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.8146 2 640.332079 1278.6496 76864.19 0.75911 0.00048608 -0.066829 -4.2792E-05 0.69228 0.00044329 640.833405814531 648.346039127602 51.717 0.6992 51.717 51.403 52.102 -3.8147E-06 236 58 6 0 0 0 0.045383 1 28781 43.272 43.272 1 0.62585 0.74399 0 24207000 13435000 10771000 18671 1513 7034 7201 29246 29246 KESYSIYVYK 10 2 0 Unmodified _KESYSIYVYK_ 0 0 1 Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.834 2 640.332079 1278.6496 76009.78 0.72955 0.00046716 1.5504 0.00099277 2.28 0.0014599 640.834088366721 648.348131804069 49.652 0.54485 49.652 49.406 49.951 0 144 44 6 0 0 0 2.3271E-08 2 27968 123.11 123.11 1 0.63196 0.73136 0 44687000 26151000 18536000 18672 1513 7034 7201 29247;29248 29248 KESYSIYVYK 10 2 0 Unmodified _KESYSIYVYK_ 0 0 1 Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.3467 2 640.332079 1278.6496 74244.45 0.45837 0.00029351 0.14244 9.1209E-05 0.60081 0.00038472 640.332199751461 648.346282457672 59.254 1.4566 59.254 58.934 60.39 0 661 106 10 0 0 0 0.00061089 5 30136 88.681 88.681 1 1.2402 1.0483 0 106400000 48143000 58254000 18673 1513 7034 7201 29249;29250;29251;29252;29253 29251 KESYSIYVYK 10 2 0 Unmodified _KESYSIYVYK_ 0 0 1 Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.3466 2 640.332079 1278.6496 73387.21 0.52081 0.00033349 0.12741 8.1583E-05 0.64822 0.00041508 640.332083298484 648.346349178102 59.454 2.5805 59.454 59.181 61.762 -3.8147E-06 846 208 10 0 0 0 2.2493E-09 5 29597 132.25 110.5 1 1.1887 1.0164 0 82272000 36616000 45656000 18674 1513 7034 7201 29254;29255;29256;29257;29258 29256 KESYSVYVYK 10 2 0 Unmodified _KESYSVYVYK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.34 2 633.324254 1264.63395 NaN NaN NaN 0.76852 0.00048672 NaN NaN NaN NaN 43.611 0.47161 43.611 43.522 43.994 0 0 0 0 0.00010516 1 23336 96.342 72.187 1 NaN NaN 0 17436000 0 17436000 18675 34 7035 7202 29259 29259 KESYSVYVYK 10 2 0 Unmodified _KESYSVYVYK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.9674 2 633.324254 1264.63395 77457.58 0.54375 0.00034437 0.5243 0.00033205 1.0681 0.00067642 633.324431842966 641.33871361246 43.498 0.95877 43.498 42.973 43.931 -3.8147E-06 212 80 6 0 0 0 0.014318 1 23100 88.495 70.056 1 0.67975 0.80725 0 25465000 13803000 11662000 18676 34 7035 7202 29260 29260 KESYSVYVYK 10 2 0 Unmodified _KESYSVYVYK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3267 2 633.324254 1264.63395 76952.66 0.78772 0.00049888 0.34834 0.00022061 1.1361 0.00071949 633.324268159887 641.338578987019 41.59 0.86913 41.59 41.345 42.214 -3.8147E-06 298 77 6 0 0 0 8.1881E-12 3 22288 144.77 114.6 1 0.69795 0.80713 0 37020000 20665000 16355000 18677 34 7035 7202 29261;29262;29263 29262 KESYSVYVYK 10 2 0 Unmodified _KESYSVYVYK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.3391 2 633.324254 1264.63395 76102.3 0.45945 0.00029098 0.074468 4.7162E-05 0.53391 0.00033814 633.324397148793 641.338350713664 49.993 2.1125 49.993 49.64 51.752 0 931 161 10 0 0 0 0.0092179 4 24339 60.064 41.624 1 0.87828 0.74008 0 194040000 100060000 93984000 18678 34 7035 7202 29264;29265;29266;29267 29264 KESYSVYVYK 10 2 0 Unmodified _KESYSVYVYK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.3245 2 633.324254 1264.63395 76635.13 0.30913 0.00019578 0.068811 4.3579E-05 0.37794 0.00023936 633.324380501145 641.338389377393 50.108 2.2138 50.108 49.714 51.927 0 979 166 11 0 0 0 0.00029732 3 24254 94.804 76.364 1 0.92294 0.79205 0 155140000 83042000 72102000 18679 34 7035 7202 29268;29269;29270 29270 KETESEAEDNLDDLEK 16 2 0 Unmodified _KETESEAEDNLDDLEK_ 0 0 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.8231 3 622.28133 1863.82216 77969.56 0.8265 0.00051431 -0.10371 -6.4538E-05 0.72279 0.00044978 622.281371850355 627.624175048153 44.716 0.38874 44.716 44.464 44.853 0 106 28 6 0 0 0 0.048689 1 24363 12.491 12.491 1 1.4072 1.6089 0 16156000 6577200 9579200 18680 570 7036 7203 29271 29271 KFDILVTTPNR 11 1 1 Unmodified _KFDILVTTPNR_ 0 0 1 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2476 3 435.250472 1302.72959 90833 0.13265 5.7735E-05 -0.1077 -4.6876E-05 0.024949 1.0859E-05 435.2502587992 441.2578922295 70.392 0.51664 70.392 70.135 70.651 0 67 41 4 0 0 0 0.033111 1 42086 29.341 22.212 1 1.4164 1.5606 0 6206700 2449300 3757300 18681 2126 7037 7204 29272 29272 KFDPFLDLSLDIPSQFR 17 1 1 Unmodified _KFDPFLDLSLDIPSQFR_ 0 0 1 B3KMX7;Q498Y2;H0YLB7;H0YKU8;Q6JHV3;H0YMI4;Q9Y6I4;B4DWJ6;Q9Y2R8 B3KMX7 B3KMX7 USP3 Ubiquitinyl hydrolase 1;Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.0343 3 680.026319 2037.05713 74092.54 0.79898 0.00054333 -0.064468 -4.384E-05 0.73452 0.00049949 680.026541209684 686.033468602894 133.03 0.14311 133.03 132.96 133.11 0 24 5 7 0 0 0 3.4562E-07 1 89240 68.82 68.82 1 0.96632 1.0691 0 7473300 3810400 3662900 18682 910 7038 7205 29273 29273 KFDQLLAEEK 10 2 0 Unmodified _KFDQLLAEEK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0;O14729;O14794;Q68D89;A0A0C4DFM8;B4E177;A1L2Z2;P35580;Q7Z406 A0A024R1N1;P35580;Q7Z406 A0A024R1N1 MYH9;MYH11;DKFZp686D10126;MYH14;MYH10 Myosin-9;Myosin-11;Myosin-10;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.8298 2 610.829703 1219.64485 76664.41 0.41215 0.00025175 0.18507 0.00011304 0.59721 0.0003648 611.331778182837 618.843878234182 50.816 0.41738 50.816 50.564 50.982 0 135 38 5 0 0 0 0.00039655 1 28020 92.866 37.496 1 1.8141 2.1417 0 49827000 23044000 26783000 18683 81;1544;1875 7039 7206 29274 29274 KFDQLLAEEK 10 2 0 Unmodified _KFDQLLAEEK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0;O14729;O14794;Q68D89;A0A0C4DFM8;B4E177;A1L2Z2;P35580;Q7Z406 A0A024R1N1;P35580;Q7Z406 A0A024R1N1 MYH9;MYH11;DKFZp686D10126;MYH14;MYH10 Myosin-9;Myosin-11;Myosin-10;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.8443 2 610.829703 1219.64485 76807.3 0.64069 0.00039135 0.27395 0.00016734 0.91464 0.00055869 610.830245796491 618.843843731259 51.386 1.187 51.386 50.954 52.141 0 443 103 8 0 0 0 6.1943E-30 2 28194 176.65 111.94 1 1.582 1.8666 0 165640000 60571000 105070000 18684 81;1544;1875 7039 7206 29275;29276 29275 KFDQLLAEEK 10 2 0 Unmodified _KFDQLLAEEK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0;O14729;O14794;Q68D89;A0A0C4DFM8;B4E177;A1L2Z2;P35580;Q7Z406 A0A024R1N1;P35580;Q7Z406 A0A024R1N1 MYH9;MYH11;DKFZp686D10126;MYH14;MYH10 Myosin-9;Myosin-11;Myosin-10;Myosin-14 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8445 2 610.829703 1219.64485 NaN NaN NaN 0.046151 2.8191E-05 NaN NaN NaN NaN 57.75 1.4691 57.75 57.42 58.889 0 0 0 0 1.126E-11 1 29159 127.83 82.85 1 NaN NaN 0 13366000 0 13366000 18685 81;1544;1875 7039 7206 29277 29277 KFDQLLAEEK 10 2 0 Unmodified _KFDQLLAEEK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0;O14729;O14794;Q68D89;A0A0C4DFM8;B4E177;A1L2Z2;P35580;Q7Z406 A0A024R1N1;P35580;Q7Z406 A0A024R1N1 MYH9;MYH11;DKFZp686D10126;MYH14;MYH10 Myosin-9;Myosin-11;Myosin-10;Myosin-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.8444 2 610.829703 1219.64485 75926.99 0.47558 0.0002905 0.15186 9.2759E-05 0.62743 0.00038326 610.830084874469 618.843842806458 57.871 1.4801 57.871 57.517 58.997 -3.8147E-06 548 112 8 0 0 0 2.2493E-09 2 28671 132.25 76.88 1 2.5957 2.1996 0 18076000 4679600 13397000 18686 81;1544;1875 7039 7206 29278;29279 29279 KFEQGFITDPVVLSPSHTVGDVLEAK 26 2 0 Unmodified _KFEQGFITDPVVLSPSHTVGDVLEAK_ 0 0 1 B4DNJ7;B3KRZ3;Q6ZNB1;Q5H9Q6;P20839;C9K0R9 B4DNJ7 B4DNJ7 IMPDH;DKFZp781N0678;IMPDH1 Inosine-5-monophosphate dehydrogenase;Inosine-5-monophosphate dehydrogenase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 944.5082 3 938.495513 2812.46471 65189.79 0.81279 0.0007628 -0.352 -0.00033035 0.46079 0.00043245 939.16388367312 944.507189419729 121.47 0.29218 121.47 121.33 121.62 0 33 13 5 0 0 0 0.054979 1 72337 7.2755 7.2755 1 1.734 1.5 0 3933500 994780 2938700 18687 935 7040 7207 29280 29280 KFPGSAALVGAVR 13 1 1 Unmodified _KFPGSAALVGAVR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 424.9189 3 424.918945 1271.73501 91607.84 -0.32515 -0.00013816 0.50203 0.00021332 0.17688 7.5158E-05 424.919199059394 430.926579725723 78.582 0.49187 78.582 78.36 78.852 7.6294E-06 140 33 6 0 0 0 0.0079345 2 41386 25.718 16.988 1 1.9126 1.617 0 3656500 1408700 2247800 18688 2002 7041 7208 29281;29282 29282 KFSNSIPQSQTGNSETATPTNVDLPQVIPK 30 2 0 Unmodified _KFSNSIPQSQTGNSETATPTNVDLPQVIPK_ 0 0 1 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1072.2236 3 1066.88076 3197.62044 60973.1 0.53189 0.00056746 -0.14598 -0.00015574 0.3859 0.00041171 1067.21518280371 1072.55779176405 96.471 0.37166 96.471 96.267 96.639 0 76 33 4 0 0 0 0.0094093 3 60093 20.069 20.069 1 1.0661 1.219 0 16419000 10621000 5798100 18689 1570 7042 7209 29283;29284;29285 29284 KFSNSIPQSQTGNSETATPTNVDLPQVIPK 30 2 0 Unmodified _KFSNSIPQSQTGNSETATPTNVDLPQVIPK_ 0 0 1 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1066.8799 3 1066.88076 3197.62044 58673.47 0.26759 0.00028548 -0.0024085 -2.5696E-06 0.26518 0.00028291 1067.54929564825 1072.55769748391 110.08 0.51381 110.08 109.8 110.32 0 248 26 14 0 0 0 0.00026947 3 63439 27.863 27.863 1 1.1357 0.96607 0 31391000 14100000 17291000 18690 1570 7042 7209 29286;29287;29288 29287 KFSNSIPQSQTGNSETATPTNVDLPQVIPK 30 2 0 Unmodified _KFSNSIPQSQTGNSETATPTNVDLPQVIPK_ 0 0 1 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1072.5587 3 1066.88076 3197.62044 58858.98 0.25215 0.00026902 -0.021965 -2.3434E-05 0.23019 0.00024558 1067.21491295479 1072.55775586915 109.84 0.4739 109.84 109.59 110.07 -7.6294E-06 224 24 12 0 0 0 0.00028433 3 62371 27.363 27.363 1 1.1227 0.9532 0 24849000 11823000 13026000 18691 1570 7042 7209 29289;29290;29291 29291 KFYPLEIDYGQDEEAVK 17 2 0 Unmodified _KFYPLEIDYGQDEEAVK_ 0 0 1 A0A024R3T8;P09874;B4E0E1 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.3366 3 682.001839 2042.98369 72923.42 0.62225 0.00042437 0.21414 0.00014604 0.83639 0.00057042 682.336267943402 687.344739097851 104.7 0.898 104.7 104.32 105.22 0 358 52 13 0 0 0 1.5635E-05 1 59682 75.239 75.239 1 1.1806 1.0069 0 18935000 8408000 10527000 18692 139 7043 7210 29292 29292 KFYPLEIDYGQDEEAVK 17 2 0 Unmodified _KFYPLEIDYGQDEEAVK_ 0 0 1 A0A024R3T8;P09874;B4E0E1 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.3365 3 682.001839 2042.98369 72584.17 0.48508 0.00033082 0.15194 0.00010363 0.63702 0.00043445 682.336165591812 687.344682817404 104.43 0.8148 104.43 104.07 104.88 0 321 49 9 0 0 0 1.761E-05 2 58658 69.935 69.935 1 1.0869 0.92063 0 16555000 8651600 7903700 18693 139 7043 7210 29293;29294 29294 KGDAASQFLVFCQK 14 2 0 Unmodified _KGDAASQFLVFCQK_ 0 0 1 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.9479 3 533.604697 1597.79226 NaN NaN NaN -0.66857 -0.00035675 NaN NaN NaN NaN 91.003 0.44131 91.003 90.787 91.229 -7.6294E-06 0 0 0 0.0057601 1 49720 44.132 36.588 1 NaN NaN 0 2278900 0 2278900 18694 1435 7044 7211 29295 29295 KGDECELLGHSK 12 2 0 Unmodified _KGDECELLGHSK_ 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2226 3 458.222364 1371.64526 88628.25 0.314 0.00014388 -0.081932 -3.7543E-05 0.23207 0.00010634 458.222619880681 463.565168777961 22.275 0.35416 22.275 22.074 22.428 1.9073E-06 84 20 6 0 0 0 0.001043 1 8399 54.199 46.095 1 1.4064 1.6803 0 18853000 6629800 12223000 18695 1580 7045 7212 29296 29296 KGDEVDGVDEVAK 13 2 0 Unmodified _KGDEVDGVDEVAK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.8363 2 680.833171 1359.65179 74832.99 0.53041 0.00036112 0.28845 0.00019639 0.81886 0.00055751 680.833366883259 688.847291838446 29.036 0.21676 29.036 28.924 29.141 0 48 10 7 0 0 0 1.001E-38 1 13917 184.65 163.95 1 0.89016 1.0506 0 101590000 54386000 47205000 18696 139 7046 7213 29297 29297 KGDEVDGVDEVAK 13 2 0 Unmodified _KGDEVDGVDEVAK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.8347 2 680.833171 1359.65179 72239.83 0.65372 0.00044508 0.64889 0.00044179 1.3026 0.00088686 680.833791859335 688.847576859712 28.155 0.28906 28.155 28.038 28.328 -1.9073E-06 42 12 7 0 0 0 5.2034E-238 1 13367 316.12 288.14 1 0.60309 0.70087 0 127570000 79521000 48045000 18697 139 7046 7213 29298 29298 KGDEVDGVDEVAK 13 2 0 Unmodified _KGDEVDGVDEVAK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.8486 2 680.833171 1359.65179 NaN NaN NaN 0.32786 0.00022322 NaN NaN NaN NaN 32.884 0.26047 32.884 32.796 33.057 0 0 0 0 6.9293E-05 1 14311 92.039 71.169 1 NaN NaN 0 3689300 0 3689300 18698 139 7046 7213 29299 29299 KGDEVDGVDEVAK 13 2 0 Unmodified _KGDEVDGVDEVAK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.8474 2 680.833171 1359.65179 NaN NaN NaN 0.8669 0.00059021 NaN NaN NaN NaN 32.979 0.43481 32.979 32.878 33.313 0 0 0 0 0.045462 1 13894 40.767 33.488 1 NaN NaN 0 1327100 0 1327100 18699 139 7046 7213 29300 29300 KGDEYIINGQK 11 2 0 Unmodified _KGDEYIINGQK_ 0 0 1 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;A0A0S2Z3A5;B4DVE0 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.8447 2 632.830234 1263.64592 NaN NaN NaN -0.71189 -0.00045051 NaN NaN NaN NaN 26.063 0.32776 26.063 25.906 26.234 1.9073E-06 0 0 0 3.9372E-16 1 11536 135.8 114.82 1 NaN NaN 0 12324000 0 12324000 18700 545 7047 7214 29301 29301 KGDGGGASGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEAR 52 1 2 Unmodified _KGDGGGASGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEAR_ 0 0 2 A8K4T9;Q53GL6 A8K4T9 A8K4T9 RALY MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1067.9816 4 1067.47984 4265.89025 59238.65 0.19424 0.00020735 -0.05431 -5.7975E-05 0.13993 0.00014937 1067.98108819934 1074.98914884553 32.822 0.32826 32.822 32.668 32.996 0 241 32 11 0 0 0 1.4678E-05 4 16305 34.284 34.284 1 0.76756 0.85072 0 40569000 21002000 19567000 18701 741 7048 7215 29302;29303;29304;29305 29305 KGDGGGASGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEAR 52 1 2 Unmodified _KGDGGGASGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEAR_ 0 0 2 A8K4T9;Q53GL6 A8K4T9 A8K4T9 RALY MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1074.4893 4 1067.47984 4265.89025 59605.6 0.37773 0.00040322 -0.14512 -0.00015491 0.23261 0.00024831 1067.98109114491 1074.73852134547 31.958 0.35068 31.958 31.778 32.129 0 219 31 11 0 0 0 0.0057591 3 15839 19.328 19.328 1 0.76915 0.86998 0 34635000 19356000 15279000 18702 741 7048 7215 29306;29307;29308 29307 KGDGGGASGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEAR 52 1 2 Unmodified _KGDGGGASGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEAR_ 0 0 2 A8K4T9;Q53GL6 A8K4T9 A8K4T9 RALY MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1074.9893 4 1067.47984 4265.89025 57841.51 -0.18498 -0.00019746 0.77681 0.00082923 0.59183 0.00063177 1068.4865860552 1074.738344531 39.023 0.49402 39.023 38.817 39.311 0 263 38 10 0 0 0 0.034427 5 17245 6.4589 6.4589 1 0.60958 0.60585 0 11479000 7932000 3546500 18703 741 7048 7215 29309;29310;29311;29312;29313 29312 KGDIIQLQR 9 1 1 Unmodified _KGDIIQLQR_ 0 0 1 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.8312 2 535.819473 1069.62439 NaN NaN NaN -0.13467 -7.216E-05 NaN NaN NaN NaN 37.838 0.39476 37.838 37.637 38.032 0 0 0 0 0.0045801 1 19651 76.282 48.458 1 NaN NaN 0 67982000 0 67982000 18704 1454 7049 7216 29314 29314 KGDIVDIK 8 2 0 Unmodified _KGDIVDIK_ 0 0 1 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.2631 2 444.263468 886.512382 89152.57 -0.05427 -2.411E-05 0.067473 2.9976E-05 0.013203 5.8657E-06 444.263422772412 452.277595735867 29.693 0.68735 29.693 29.541 30.229 0 262 59 8 0 0 0 0.0016342 2 14401 121.35 35.704 1 0.97979 1.1554 0 532300000 273720000 258580000 18705 1571 7050 7217 29315;29316 29316 KGDIVDIK 8 2 0 Unmodified _KGDIVDIK_ 0 0 1 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 444.2635 2 444.263468 886.512382 88552.15 0.37658 0.0001673 -0.43362 -0.00019264 -0.057038 -2.534E-05 444.263292397247 452.27733616779 29.142 0.46196 29.142 28.982 29.444 0 141 32 8 0 0 0 0.0020856 2 14011 110.79 35.032 1 0.99382 1.1669 0 1678600000 860560000 818010000 18706 1571 7050 7217 29317;29318 29318 KGDIVDIK 8 2 0 Unmodified _KGDIVDIK_ 0 0 1 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 444.2635 2 444.263468 886.512382 89174.72 0.10085 4.4806E-05 0.025391 1.128E-05 0.12625 5.6086E-05 444.263449021165 452.277506410635 33.456 0.46533 33.456 33.3 33.765 -3.8147E-06 183 37 8 0 0 0 0.0037402 1 14632 101.65 20.35 1 0.85989 0.72677 0 108430000 56454000 51980000 18707 1571 7050 7217 29319 29319 KGDIVDIK 8 2 0 Unmodified _KGDIVDIK_ 0 0 1 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 452.2775 2 444.263468 886.512382 89137.57 -0.031503 -1.3996E-05 -0.059051 -2.6234E-05 -0.090554 -4.023E-05 444.263337149774 452.277514257735 33.466 0.44359 33.466 33.292 33.735 0 189 36 9 0 0 0 0.037342 2 14123 57.267 9.4189 1 0.8354 0.71454 0 87779000 47443000 40336000 18708 1571 7050 7217 29320;29321 29321 KGDLDTAAVK 10 2 0 Unmodified _KGDLDTAAVK_ 0 0 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.2967 2 509.282389 1016.55022 84834.51 0.21057 0.00010724 0.10177 5.1828E-05 0.31233 0.00015907 509.282269618179 517.296902626288 20.597 0.34948 20.597 20.471 20.82 0 63 14 7 0 0 0 1.3648E-05 2 7024 106.62 52.651 1 0.50612 0.59755 0 47123000 30954000 16168000 18709 1679 7051 7218 29322;29323 29322 KGDLDTAAVK 10 2 0 Unmodified _KGDLDTAAVK_ 0 0 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2819 2 509.282389 1016.55022 NaN NaN NaN -0.063113 -3.2142E-05 NaN NaN NaN NaN 20.397 0.26021 20.397 20.28 20.54 0 0 0 0 9.7255E-22 1 6686 149.17 58.102 1 NaN NaN 0 26403000 26403000 0 18710 1679 7051 7218 29324 29324 KGEDVLGSVR 10 1 1 Unmodified _KGEDVLGSVR_ 0 0 1 A8K492;P56192;A0A024RBA2;F5H2V6 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.3045 2 530.293288 1058.57202 83252.41 0.88294 0.00046822 -0.026299 -1.3946E-05 0.85664 0.00045427 530.293508984968 539.304507327408 32.207 0.71688 32.207 32.017 32.734 0 171 64 5 0 0 0 0.00093959 1 15946 84.882 67.256 1 3.2133 3.6759 0 25907000 6163600 19743000 18711 732 7052 7219 29325 29325 KGEFETGFEK 10 2 0 Unmodified _KGEFETGFEK_ 0 0 1 H3BR35;Q7KZX8;B2RCT6;A8K2W7;P15170;B4DQM6;Q8IYD1 H3BR35;Q8IYD1 H3BR35 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.2998 2 586.285128 1170.5557 NaN NaN NaN 0.24234 0.00014208 NaN NaN NaN NaN 38.188 0.52433 38.188 37.854 38.378 0 0 0 0 0.018564 1 17299 55.084 38.881 1 NaN NaN 0 2390400 0 2390400 18712 715;1899 7053 7220 29326 29326 KGEFQEVVR 9 1 1 Unmodified _KGEFQEVVR_ 0 0 1 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.295 2 546.29583 1090.57711 83812.09 0.62933 0.0003438 -1.4438 -0.00078875 -0.81449 -0.00044495 546.294686431429 555.306477709238 28.368 0.40229 28.368 28.149 28.551 0 73 25 4 0 0 0 0.0066878 1 13555 70.389 48.003 1 0.87934 0.9897 0 13584000 6948500 6635400 18713 582 7054 7221 29327 29327 KGEITGEVR 9 1 1 Unmodified _KGEITGEVR_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;H0Y5F3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.7737 2 494.774731 987.534909 90659.13 -0.254 -0.00012567 -0.55705 -0.00027561 -0.81104 -0.00040128 494.773859061383 503.786092197898 18.741 0.34413 18.741 18.622 18.966 0 72 24 4 0 0 0 0.0025898 2 5638 83.998 57.036 1 1.4782 1.5924 0 14270000 4779100 9490800 18714 1504 7055 7222 29328;29329 29329 KGEITGEVR 9 1 1 Unmodified _KGEITGEVR_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;H0Y5F3 P21333 P21333 FLNA;FLJ00119 Filamin-A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7736 2 494.774731 987.534909 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.716 1 18.716 18.216 19.216 0 0 0 0 0.010767 1 5346 72.643 30.534 1 18715 1504 7055 7222 29330 29330 KGGEFDEFVNDDTDDDLPISK 21 2 0 Unmodified _KGGEFDEFVNDDTDDDLPISK_ 0 0 1 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.3629 3 786.020287 2355.03903 NaN NaN NaN -0.41504 -0.00032623 NaN NaN NaN NaN 95.838 0.52228 95.838 95.493 96.016 0 0 0 0 0.026725 1 58299 25.823 22.725 1 NaN NaN 0 6582200 0 6582200 18716 765 7056 7223 29331 29331 KGGSWIQEINVAEK 14 2 0 Unmodified _KGGSWIQEINVAEK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.2788 3 520.278979 1557.81511 84622.78 0.39993 0.00020808 0.042487 2.2105E-05 0.44242 0.00023018 520.278942839265 525.621855697581 88.13 0.49812 88.13 87.907 88.406 0 115 30 5 0 0 0 0.0069898 1 48661 21.237 21.237 1 0.28222 0.24995 0 2333800 1690600 643240 18717 1665 7057 7224 29332 29332 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.5704 3 402.563161 1204.66765 96096.22 0.19844 7.9886E-05 0.14315 5.7628E-05 0.3416 0.00013751 402.563161859459 408.570825147197 31.03 0.54079 31.03 30.823 31.364 0 238 48 8 0 0 0 0.0025516 1 15265 46.592 46.592 1 0.71874 0.85985 0 55289000 29021000 26269000 18718 744 7058 7225 29333 29333 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 402.5647 3 402.563161 1204.66765 95497.93 0.12988 5.2285E-05 0.28056 0.00011294 0.41044 0.00016523 402.563162455001 408.570809189601 26.151 0.61972 26.151 25.968 26.588 0 153 33 7 0 0 0 2.5132E-05 1 11605 74.698 74.698 1 0.66384 0.78027 0 65754000 41033000 24721000 18719 744 7058 7225 29334 29334 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 306.6807 4 302.17419 1204.66765 106509.4 0.48298 0.00014594 0.027433 8.2896E-06 0.51041 0.00015423 302.174252036626 306.679746543551 26.136 0.33641 26.136 25.968 26.305 0 46 16 4 0 0 0 0.039168 1 11616 20.096 20.096 1 0.69265 0.76765 0 8960500 4806500 4154000 18720 744 7058 7225 29335 29335 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.3417 2 603.341104 1204.66765 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.21 1 26.21 25.71 26.71 -1.9073E-06 0 0 0 1.3882E-06 1 11682 104.79 82.709 1 18721 744 7058 7225 29336 29336 KGIDYDFPSLILQK 14 2 0 Unmodified _KGIDYDFPSLILQK_ 0 0 1 Q9BYG3;C9J808;C9J6C5 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.6469 3 546.303013 1635.88721 80461.35 0.46887 0.00025614 0.043222 2.3612E-05 0.51209 0.00027976 546.302863935196 551.645703393702 120.18 0.70403 120.18 119.92 120.62 -7.6294E-06 136 30 7 0 0 0 0.011582 1 71182 26.548 26.161 1 1.6888 1.4548 0 5863500 1906200 3957300 18722 2019 7059 7226 29337 29337 KGIDYDFPSLILQK 14 2 0 Unmodified _KGIDYDFPSLILQK_ 0 0 1 Q9BYG3;C9J808;C9J6C5 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.6464 3 546.303013 1635.88721 81328.72 0.7231 0.00039503 -0.26108 -0.00014263 0.46202 0.0002524 546.637346565794 551.645571450849 119.88 0.6963 119.88 119.64 120.34 0 126 30 8 0 0 0 0.0014299 2 70093 43.316 42.21 1 1.7536 1.4821 0 7166200 2009800 5156400 18723 2019 7059 7226 29338;29339 29338 KGPDGYDPQFITK 13 2 0 Unmodified _KGPDGYDPQFITK_ 0 0 1 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.3848 2 733.369724 1464.72489 NaN NaN NaN 1.2532 0.00091907 NaN NaN NaN NaN 53.958 0.44075 53.958 53.717 54.157 0 0 0 0 0.0287 1 30175 43.68 27.789 1 NaN NaN 0 8049900 0 8049900 18724 1102 7060 7227 29340 29340 KGPEPVPLEFIPAQGLLGR 19 1 1 Unmodified _KGPEPVPLEFIPAQGLLGR_ 0 0 1 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3932 3 673.385959 2017.13605 73637.72 0.9668 0.00065103 -0.43859 -0.00029534 0.5282 0.00035569 673.720066570406 679.392902910279 120.74 0.72187 120.74 120.36 121.08 0 272 51 8 0 0 0 7.5764E-06 2 77986 56.121 56.121 1 0.89471 1.0022 0 21178000 11600000 9578500 18725 2007 7061 7228 29341;29342 29341 KGPEPVPLEFIPAQGLLGR 19 1 1 Unmodified _KGPEPVPLEFIPAQGLLGR_ 0 0 1 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.0547 3 673.385959 2017.13605 73468.22 0.92767 0.00062468 -0.097393 -6.5583E-05 0.83028 0.0005591 673.720170720824 679.727793523121 119.96 0.64582 119.96 119.6 120.25 -7.6294E-06 234 47 6 0 0 0 0.0016452 1 78987 30.152 30.152 1 0.75215 0.86478 0 26057000 14199000 11858000 18726 2007 7061 7228 29343 29343 KGPEPVPLEFIPAQGLLGR 19 1 1 Unmodified _KGPEPVPLEFIPAQGLLGR_ 0 0 1 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.7202 3 673.385959 2017.13605 73229.54 0.9705 0.00065352 -0.28161 -0.00018963 0.68888 0.00046388 673.719918871402 679.727807779139 132.19 0.41838 132.19 132.02 132.43 0 91 19 7 0 0 0 0.0125 1 80344 21.2 21.2 1 0.80447 0.6661 0 5639800 3205300 2434600 18727 2007 7061 7228 29344 29344 KGPEPVPLEFIPAQGLLGR 19 1 1 Unmodified _KGPEPVPLEFIPAQGLLGR_ 0 0 1 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.7286 3 673.385959 2017.13605 74326.52 1.0666 0.0007182 -0.019586 -1.3189E-05 1.047 0.00070501 673.720085173668 679.728104681764 131.89 0.48676 131.89 131.62 132.11 0 82 19 6 0 0 0 0.0017297 2 79186 29.766 29.766 1 0.96043 0.80828 0 7689700 4886400 2803300 18728 2007 7061 7228 29345;29346 29345 KGPEPVPLEFIPAQGLLGRPGELCAQHFTLS 31 1 1 Unmodified _KGPEPVPLEFIPAQGLLGRPGELCAQHFTLS_ 0 0 2 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 840.9481 4 840.445868 3357.75437 66821.62 1.0152 0.00085323 -0.033862 -2.8459E-05 0.98135 0.00082477 840.697132400101 845.202561639119 134.25 0.27039 134.25 134.17 134.44 0 56 12 9 0 0 0 0.037338 1 81021 14.817 14.817 1 0.76296 0.64524 0 10359000 5252600 5106600 18729 2007 7062 7229 29347 29347 KGPGLAVQSGDK 12 2 0 Unmodified _KGPGLAVQSGDK_ 0 0 1 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.8198 2 578.81967 1155.62479 79566.68 0.32478 0.00018799 -0.010638 -6.1574E-06 0.31414 0.00018183 578.819874905441 586.833869288532 20.607 0.41262 20.607 20.432 20.844 0 88 17 8 0 0 0 1.861E-17 2 6986 138.75 99.979 1 1.2387 1.4625 0 46189000 22527000 23662000 18730 571 7063 7230 29348;29349 29348 KGPGLAVQSGDK 12 2 0 Unmodified _KGPGLAVQSGDK_ 0 0 1 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.8202 2 578.81967 1155.62479 80719.46 0.66644 0.00038575 -0.29191 -0.00016897 0.37452 0.00021678 578.81967680636 586.833646786877 20.397 0.35 20.397 20.28 20.63 0 53 11 8 0 0 0 2.7617E-05 2 6720 105.03 82.946 1 1.454 1.6865 0 78834000 31946000 46888000 18731 571 7063 7230 29350;29351 29350 KGPGLAVQSGDK 12 2 0 Unmodified _KGPGLAVQSGDK_ 0 0 1 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.3212 2 578.81967 1155.62479 79449.03 0.14879 8.6125E-05 -0.095912 -5.5516E-05 0.052882 3.0609E-05 578.820153657744 586.833905014326 21.905 0.51474 21.905 21.766 22.281 -1.9073E-06 68 19 7 0 0 0 0.013598 1 6814 48.044 22.485 1 0.82951 0.71456 0 5866100 2956800 2909300 18732 571 7063 7230 29352 29352 KGPGLAVQSGDK 12 2 0 Unmodified _KGPGLAVQSGDK_ 0 0 1 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.8203 2 578.81967 1155.62479 78874.23 0.068808 3.9828E-05 -0.059117 -3.4218E-05 0.0096919 5.6098E-06 578.819990579453 586.833884623708 21.741 0.55947 21.741 21.596 22.155 0 66 19 9 0 0 0 0.015061 1 6244 47.429 29.61 1 0.88919 0.75916 0 4834300 2439100 2395300 18733 571 7063 7230 29353 29353 KGPLTVAQK 9 2 0 Unmodified _KGPLTVAQK_ 0 0 1 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.2436 2 471.292559 940.570566 87227.46 -0.056691 -2.6718E-05 1.9248 0.00090714 1.8681 0.00088042 471.292652673472 479.30684810783 20.333 0.32684 20.333 20.144 20.471 0 47 12 7 0 0 0 0.016159 1 6791 85.862 53.907 1 0.87266 1.0336 0 29045000 15254000 13791000 18734 1676 7064 7231 29354 29354 KGPLTVAQK 9 2 0 Unmodified _KGPLTVAQK_ 0 0 1 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2923 2 471.292559 940.570566 88539.99 -0.024784 -1.168E-05 -0.028046 -1.3218E-05 -0.05283 -2.4898E-05 471.292444366153 479.306679554915 20.118 0.30287 20.118 19.954 20.257 0 40 10 6 0 0 0 0.0029081 1 6418 81.525 45.645 1 0.9334 1.0732 0 24335000 12699000 11636000 18735 1676 7064 7231 29355 29355 KGPQSLFNAPR 11 1 1 Unmodified _KGPQSLFNAPR_ 0 0 1 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.5673 3 405.559528 1213.65676 95319.77 0.32151 0.00013039 0.3745 0.00015188 0.69601 0.00028227 405.559647119673 411.567198189096 45.17 1.2804 45.17 44.413 45.694 0 341 114 6 0 0 0 6.2874E-05 1 24260 70.412 50.805 1 1.092 1.2931 0 40426000 18999000 21427000 18736 1570 7065 7232 29356 29356 KGPQSLFNAPR 11 1 1 Unmodified _KGPQSLFNAPR_ 0 0 1 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.8359 2 607.835654 1213.65676 79250.59 0.8124 0.00049381 0.18412 0.00011191 0.99652 0.00060572 607.835590303832 616.846652099148 45.078 0.61045 45.078 44.955 45.565 0 112 53 5 0 0 0 0.0007687 1 24273 76.85 52.075 1 1.0335 1.2126 0 32928000 14555000 18373000 18737 1570 7065 7232 29357 29357 KGPQSLFNAPR 11 1 1 Unmodified _KGPQSLFNAPR_ 0 0 1 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8235 2 607.835654 1213.65676 79043.07 0.54697 0.00033247 0.3277 0.00019919 0.87466 0.00053165 607.836062068363 616.846628841549 44.9 0.53326 44.9 44.457 44.991 0 91 48 4 0 0 0 0.035863 1 23967 45.368 32.741 1 1.2573 1.4379 0 25832000 10109000 15723000 18738 1570 7065 7232 29358 29358 KGPQSLFNAPR 11 1 1 Unmodified _KGPQSLFNAPR_ 0 0 1 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.5673 3 405.559528 1213.65676 93969.95 0.46587 0.00018894 0.19003 7.7067E-05 0.65589 0.000266 405.559522507875 411.567101403838 43.15 0.59898 43.15 42.843 43.442 0 275 49 8 0 0 0 8.9251E-09 2 23262 98.898 92.865 1 1.0948 1.2923 0 128450000 64157000 64295000 18739 1570 7065 7232 29359;29360 29359 KGPQSLFNAPR 11 1 1 Unmodified _KGPQSLFNAPR_ 0 0 1 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8477 2 607.835654 1213.65676 78624.27 0.82199 0.00049963 -0.022207 -1.3498E-05 0.79978 0.00048613 607.835535653242 616.846944663165 43.143 0.5476 43.143 42.88 43.428 0 241 45 7 0 0 0 1.0075E-07 2 23295 115.82 92.502 1 1.106 1.305 0 121920000 57609000 64313000 18740 1570 7065 7232 29361;29362 29362 KGPQSLFNAPR 11 1 1 Unmodified _KGPQSLFNAPR_ 0 0 1 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 411.567 3 405.559528 1213.65676 93552.74 -0.41658 -0.00016895 0.37097 0.00015045 -0.045609 -1.8497E-05 405.559600606824 411.567145298547 51.046 0.85192 51.046 50.677 51.529 0 303 53 10 0 0 0 0.029814 1 24403 16.327 15.776 1 1.1199 0.94299 0 7917300 3801000 4116300 18741 1570 7065 7232 29363 29363 KGQEADLEAGGEEVPEANGSAGK 23 2 0 Unmodified _KGQEADLEAGGEEVPEANGSAGK_ 0 0 1 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.696 3 748.352259 2242.03495 73504.53 0.82233 0.00061539 -0.16112 -0.00012057 0.66121 0.00049482 748.686883874925 753.695310958992 40.945 0.34502 40.945 40.793 41.138 0 108 28 6 0 0 0 0.00053612 1 21435 31.27 31.27 1 0.78237 0.90474 0 10125000 5276000 4849000 18742 2079 7066 7233 29364 29364 KGQEADLEAGGEEVPEANGSAGK 23 2 0 Unmodified _KGQEADLEAGGEEVPEANGSAGK_ 0 0 1 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.3524 3 748.352259 2242.03495 73094.81 0.93193 0.00069741 -0.33113 -0.0002478 0.6008 0.00044961 748.351724843468 753.695046848335 39.829 0.33436 39.829 39.647 39.981 -3.8147E-06 86 28 5 0 0 0 0.00019771 1 21187 34.914 34.914 1 0.77835 0.8886 0 13430000 7214100 6215500 18743 2079 7066 7233 29365 29365 KGQEADLEAGGEEVPEANGSAGK 23 2 0 Unmodified _KGQEADLEAGGEEVPEANGSAGK_ 0 0 1 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 753.6949 3 748.352259 2242.03495 69530.71 0.48002 0.00035923 0.33568 0.00025121 0.8157 0.00061043 748.686524359972 753.695313741565 47.938 0.4189 47.938 47.733 48.152 0 154 26 8 0 0 0 0.00088134 2 23240 27.554 27.554 1 1.4472 1.2476 0 5549900 2319500 3230400 18744 2079 7066 7233 29366;29367 29367 KGQEADLEAGGEEVPEANGSAGK 23 2 0 Unmodified _KGQEADLEAGGEEVPEANGSAGK_ 0 0 1 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.6956 3 748.352259 2242.03495 70845.93 0.21908 0.00016395 0.30638 0.00022928 0.52547 0.00039323 748.686654173085 753.695111102705 48.402 0.49993 48.402 48.147 48.647 0 202 44 7 0 0 0 0.00072204 2 23056 29.269 29.269 1 1.2769 1.0941 0 4171700 1709500 2462200 18745 2079 7066 7233 29368;29369 29369 KGQVIQF 7 1 0 Unmodified _KGQVIQF_ 0 0 1 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.4022 1 819.472315 818.465038 67720.66 0.64944 0.0005322 0.17094 0.00014008 0.82038 0.00067228 819.472350753928 827.486516661391 59.331 0.5037 59.331 58.973 59.476 3.8147E-06 105 38 4 0 0 0 0.030625 1 33875 26.109 21.891 1 0.61311 0.62815 0 14391000 8547300 5844000 18746 830 7067 7234 29370 29370 KGQVIQF 7 1 0 Unmodified _KGQVIQF_ 0 0 1 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.2464 2 410.239796 818.465038 NaN NaN NaN 0.11362 4.661E-05 NaN NaN NaN NaN 57.912 0.94641 57.912 57.327 58.274 0 0 0 0 0.032082 1 33627 71.359 61.61 1 NaN NaN 0 45367000 0 45367000 18747 830 7067 7234 29371 29371 KGQVIQF 7 1 0 Unmodified _KGQVIQF_ 0 0 1 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.392 1 819.472315 818.465038 68101.42 0.7128 0.00058412 0.1859 0.00015234 0.8987 0.00073646 819.472339112245 827.486452451324 67.942 0.92091 67.942 67.493 68.414 0 265 62 6 0 0 0 0.029368 1 35340 27.167 16.861 1 1.4588 1.1629 0 9651200 3707500 5943700 18748 830 7067 7234 29372 29372 KGQVIQF 7 1 0 Unmodified _KGQVIQF_ 0 0 1 B2R4V2;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 819.3912 1 819.472315 818.465038 66931.59 0.60857 0.00049871 0.097487 7.9888E-05 0.70606 0.00057859 819.472234798631 827.486425378834 68.145 1.3525 68.145 67.324 68.677 0 378 95 6 0 0 0 0.030625 1 34945 26.109 15.803 1 1.349 1.1119 0 10828000 4469200 6359000 18749 830 7067 7234 29373 29373 KGTVEGFEPADNK 13 2 0 Unmodified _KGTVEGFEPADNK_ 0 0 1 P37108;H0YLA2 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.345 2 696.343706 1390.67286 71875.59 0.70204 0.00048886 0.057502 4.0041E-05 0.75954 0.0005289 696.343895911405 704.358049018936 26.581 0.41796 26.581 26.305 26.723 0 102 22 7 0 0 0 0.00017533 1 12041 92.19 92.19 1 0.66892 0.77449 0 49975000 28423000 21552000 18750 1549 7068 7235 29374 29374 KGTVEGFEPADNK 13 2 0 Unmodified _KGTVEGFEPADNK_ 0 0 1 P37108;H0YLA2 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.3441 2 696.343706 1390.67286 72750.34 0.41435 0.00028853 -0.58323 -0.00040613 -0.16888 -0.0001176 696.343537350909 704.357764228194 30.729 0.35874 30.729 30.521 30.88 1.9073E-06 118 24 6 0 0 0 0.0034659 1 12757 55.258 55.258 1 0.90296 0.77806 0 5738500 3015500 2723100 18751 1549 7068 7235 29375 29375 KGTVEGFEPADNK 13 2 0 Unmodified _KGTVEGFEPADNK_ 0 0 1 P37108;H0YLA2 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.5648 3 464.564896 1390.67286 88107.01 0.15177 7.0507E-05 -0.18587 -8.6347E-05 -0.034095 -1.5839E-05 464.564809563236 469.907640203151 30.753 0.34963 30.753 30.552 30.902 0 98 23 6 0 0 0 0.020418 1 12811 17.069 17.069 1 0.80517 0.69883 0 3462900 1766400 1696500 18752 1549 7068 7235 29376 29376 KGTVEGFEPADNK 13 2 0 Unmodified _KGTVEGFEPADNK_ 0 0 1 P37108;H0YLA2 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.344 2 696.343706 1390.67286 72644.69 0.32606 0.00022705 0.075481 5.2561E-05 0.40154 0.00027961 696.343631630248 704.35808205268 30.734 0.42848 30.734 30.543 30.971 1.9073E-06 121 22 9 0 0 0 0.00057071 1 12305 63.662 63.662 1 0.73989 0.62818 0 6003200 3425000 2578200 18753 1549 7068 7235 29377 29377 KGTVEGFEPADNK 13 2 0 Unmodified _KGTVEGFEPADNK_ 0 0 1 P37108;H0YLA2 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 464.5648 3 464.564896 1390.67286 NaN NaN NaN 0.37196 0.0001728 NaN NaN NaN NaN 30.747 0.3497 30.747 30.543 30.892 0 0 0 0 0.028384 1 12321 23.398 15.532 1 NaN NaN 0 1343200 1343200 0 18754 1549 7068 7235 29378 29378 KIDASQTEFEK 11 2 0 Unmodified _KIDASQTEFEK_ 0 0 1 H7BXG7;A0A1S5UZ19;A0A024RDH6;A0A024RDD3;D6REX3;O94979;H0Y9K1;H0Y8V7;H0YAB3;D6RHZ5 H7BXG7 H7BXG7 SEC31A;SEC31L1 Protein transport protein Sec31A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.3437 2 648.327524 1294.6405 NaN NaN NaN -0.19735 -0.00012795 NaN NaN NaN NaN 27.273 0.2198 27.273 27.119 27.339 1.9073E-06 0 0 0 0.0048944 1 12508 65.695 36.998 1 NaN NaN 0 3070900 0 3070900 18755 384 7069 7236 29379 29379 KIDDPIDEEEEFEELK 16 2 0 Unmodified _KIDDPIDEEEEFEELK_ 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 989.9666 2 989.462401 1976.91025 61138.81 0.58109 0.00057497 0.25389 0.00025122 0.83498 0.00082619 989.964388789454 997.476315121136 92.203 0.62978 92.203 91.98 92.609 0 220 61 6 0 0 0 1.5401E-06 2 55825 97.203 89.071 1 0.94536 1.1186 0 30577000 17237000 13340000 18756 1942 7070 7237 29380;29381 29381 KIDDPIDEEEEFEELK 16 2 0 Unmodified _KIDDPIDEEEEFEELK_ 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.3141 3 659.977359 1976.91025 75271.83 0.89107 0.00058808 0.97528 0.00064366 1.8663 0.0012317 659.978462212981 665.320625458752 92.246 1.0681 92.246 91.781 92.85 0 570 101 8 0 0 0 3.372E-57 1 55896 139.49 129.33 1 0.7622 0.8997 0 71218000 43670000 27548000 18757 1942 7070 7237 29382 29382 KIDDPIDEEEEFEELK 16 2 0 Unmodified _KIDDPIDEEEEFEELK_ 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.9626 2 989.462401 1976.91025 61247.52 0.55163 0.00054581 -0.026462 -2.6184E-05 0.52516 0.00051963 989.462861278209 997.476030715263 91.223 0.8522 91.223 90.947 91.799 7.6294E-06 273 74 7 0 0 0 0.00025851 3 56532 70.089 70.089 1 0.84725 0.97693 0 28603000 12418000 16184000 18758 1942 7070 7237 29383;29384;29385 29385 KIDDPIDEEEEFEELK 16 2 0 Unmodified _KIDDPIDEEEEFEELK_ 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.312 3 659.977359 1976.91025 73280.61 0.66018 0.00043571 0.064704 4.2703E-05 0.72489 0.00047841 660.311737131881 665.320243381886 105.07 0.71989 105.07 104.74 105.46 0 318 44 10 0 0 0 3.8748E-05 1 59782 53.278 53.278 1 1.4386 1.2203 0 53427000 21232000 32195000 18759 1942 7070 7237 29386 29386 KIDDPIDEEEEFEELK 16 2 0 Unmodified _KIDDPIDEEEEFEELK_ 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 997.4769 2 989.462401 1976.91025 60509.32 0.29223 0.00028915 0.1078 0.00010666 0.40003 0.00039582 989.963840464689 997.476782628331 105.05 0.66702 105.05 104.8 105.47 0 229 41 9 0 0 0 0.04749 1 59810 31.827 31.827 1 1.5519 1.3235 0 19207000 7159900 12047000 18760 1942 7070 7237 29387 29387 KIDDPIDEEEEFEELK 16 2 0 Unmodified _KIDDPIDEEEEFEELK_ 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 660.3119 3 659.977359 1976.91025 73825.74 0.54433 0.00035924 0.17496 0.00011547 0.71929 0.00047472 660.311878566658 665.320326586945 104.86 0.69681 104.86 104.54 105.23 0 315 41 11 0 0 0 5.3548E-05 1 58780 43.946 43.554 1 1.5026 1.2782 0 34377000 13468000 20908000 18761 1942 7070 7237 29388 29388 KIDDPIDEEEEFEELK 16 2 0 Unmodified _KIDDPIDEEEEFEELK_ 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 989.4617 2 989.462401 1976.91025 60767.69 0.15315 0.00015153 0.14229 0.00014079 0.29543 0.00029232 989.462335873147 997.47679484994 104.84 0.65089 104.84 104.59 105.24 0 230 39 8 0 0 0 0.00023955 2 58864 75.911 75.911 1 1.5877 1.3426 0 12556000 5538000 7017900 18762 1942 7070 7237 29389;29390 29390 KIEDNNTLVFIVDVK 15 2 0 Unmodified _KIEDNNTLVFIVDVK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.3362 3 582.992727 1745.95635 79066.34 0.6089 0.00035498 0.86041 0.00050161 1.4693 0.0008566 583.32741954386 588.336151600015 116.15 1.2286 116.15 115.85 117.07 0 256 50 9 0 0 0 0.00056503 2 68288 45.438 45.438 1 0.77433 0.66198 0 11974000 6801300 5172500 18763 796 7071 7238 29391;29392 29392 KIEDNNTLVFIVDVK 15 2 0 Unmodified _KIEDNNTLVFIVDVK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 881.9987 2 873.985452 1745.95635 66218.68 0.61815 0.00054025 0.05339 4.6662E-05 0.67154 0.00058692 873.985514512812 882.500943176984 116.1 0.78813 116.1 115.88 116.66 0 148 33 8 0 0 0 3.5511E-30 1 68156 148.52 126.47 1 0.80611 0.69141 0 8008400 4586200 3422200 18764 796 7071 7238 29393 29393 KIEDNNTLVFIVDVK 15 2 0 Unmodified _KIEDNNTLVFIVDVK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.9937 3 582.992727 1745.95635 79371.62 0.76395 0.00044538 0.73205 0.00042678 1.496 0.00087216 582.992987977933 588.336048347294 115.94 0.95978 115.94 115.66 116.62 0 225 45 8 0 0 0 5.1631E-05 2 66992 62.813 58.972 1 0.81446 0.6895 0 15216000 8537800 6677800 18765 796 7071 7238 29394;29395 29394 KIEDNNTLVFIVDVK 15 2 0 Unmodified _KIEDNNTLVFIVDVK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 882.0006 2 873.985452 1745.95635 65533.45 0.54716 0.00047821 0.27577 0.00024102 0.82292 0.00071922 873.985608238556 881.999856523685 115.93 0.81552 115.93 115.64 116.45 0 181 39 8 0 0 0 0.046851 1 67041 38.3 30.389 1 0.80808 0.68613 0 25224000 13119000 12105000 18766 796 7071 7238 29396 29396 KIEFPLPDEK 10 2 0 Unmodified _KIEFPLPDEK_ 0 0 1 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.3146 2 608.334621 1214.65469 87119.1 0.36985 0.00022499 0.096506 5.8708E-05 0.46635 0.0002837 608.333873156583 616.348926849053 73.324 0.88548 73.324 72.813 73.698 0 117 74 4 0 0 0 0.034021 1 43908 47.302 47.302 1 1.7729 2.0176 0 8405000 3864700 4540400 18767 1634 7072 7239 29397 29397 KIEFSLPDLEGR 12 1 1 Unmodified _KIEFSLPDLEGR_ 0 0 1 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.9315 3 468.589153 1402.74563 NaN NaN NaN 0.23343 0.00010938 NaN NaN NaN NaN 99.569 0.59154 99.569 99.462 100.05 0 0 0 0 0.0076878 2 61033 47.915 32.527 1 NaN NaN 0 6191200 0 6191200 18768 620 7073 7240 29398;29399 29398 KIEFSLPDLEGR 12 1 1 Unmodified _KIEFSLPDLEGR_ 0 0 1 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.5973 3 468.589153 1402.74563 89034.91 0.3893 0.00018242 -0.10543 -4.9401E-05 0.28388 0.00013302 468.589062895773 474.596671451629 98.421 0.70428 98.421 98.147 98.852 0 129 59 4 0 0 0 0.0056107 1 61603 37.998 37.998 1 2.83 3.205 0 16441000 4131900 12310000 18769 620 7073 7240 29400 29400 KIEFSLPDLEGR 12 1 1 Unmodified _KIEFSLPDLEGR_ 0 0 1 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 474.596 3 468.589153 1402.74563 91569.61 0.52126 0.00024426 -0.16146 -7.5658E-05 0.3598 0.0001686 468.589091355692 474.596485995934 111.6 0.32954 111.6 111.39 111.72 0 48 16 5 0 0 0 0.032028 1 64683 22.55 22.55 1 2.3109 2.0939 0 1833300 478920 1354400 18770 620 7073 7240 29401 29401 KIEFVVVGPEAPLAAGIVGNLR 22 1 1 Unmodified _KIEFVVVGPEAPLAAGIVGNLR_ 0 0 1 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.4471 3 750.438723 2248.29434 69980.48 0.86421 0.00064854 -0.22244 -0.00016693 0.64178 0.00048161 750.773291566449 756.445791854935 127.45 1.0687 127.45 127.34 128.41 7.6294E-06 183 70 6 0 0 0 1.3559E-05 2 83376 40.756 40.756 1 2.5628 2.8365 0 8076200 2026800 6049400 18771 1507 7074 7241 29402;29403 29402 KIEFVVVGPEAPLAAGIVGNLR 22 1 1 Unmodified _KIEFVVVGPEAPLAAGIVGNLR_ 0 0 1 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.447 3 750.438723 2248.29434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.33 1 127.33 126.83 127.83 -7.6294E-06 0 0 0 0.0079405 1 82949 38.583 34.056 1 18772 1507 7074 7241 29404 29404 KIEFVVVGPEAPLAAGIVGNLR 22 1 1 Unmodified _KIEFVVVGPEAPLAAGIVGNLR_ 0 0 1 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.7811 3 750.438723 2248.29434 71307.41 0.86273 0.00064743 -0.095154 -7.1407E-05 0.76758 0.00057602 750.773371959912 756.445863109689 127.17 1.4281 127.17 126.06 127.49 0 321 88 8 0 0 0 1.5017E-07 3 84891 53.059 53.059 1 2.5674 2.8418 0 7660900 1853800 5807100 18773 1507 7074 7241 29405;29406;29407 29406 KIEFVVVGPEAPLAAGIVGNLR 22 1 1 Unmodified _KIEFVVVGPEAPLAAGIVGNLR_ 0 0 1 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.4459 3 750.438723 2248.29434 70607.94 1.0566 0.00079294 -0.14792 -0.00011101 0.90872 0.00068194 750.772451215527 756.780880385087 134.49 0.20029 134.49 134.39 134.59 0 25 7 6 0 0 0 0.00090459 1 82132 28.675 28.675 1 1.908 1.6496 0 14334000 5351900 8982200 18774 1507 7074 7241 29408 29408 KIEHDVVMK 9 2 0 Oxidation (M) _KIEHDVVM(ox)K_ KIEHDVVM(1)K KIEHDVVM(80.69)K 0 1 1 Q9UNZ5;K7ESE5;A0A0A0MQS3 Q9UNZ5 Q9UNZ5 C19orf53 Leydig cell tumor 10 kDa protein homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.8004 2 557.799891 1113.58523 NaN NaN NaN 0.5338 0.00029775 NaN NaN NaN NaN 15.22 0.22566 15.22 15.148 15.374 0 0 0 0 0.0013461 1 2920 80.688 38.09 1 NaN NaN 0 7481800 7481800 0 18775 2116 7075 7242 29409 29409 1941 KIEISQHAK 9 2 0 Unmodified _KIEISQHAK_ 0 0 1 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 351.8732 3 351.873224 1052.59784 98482.75 -0.021455 -7.5495E-06 -0.16756 -5.896E-05 -0.18902 -6.651E-05 351.873124112087 357.215951375721 17.284 0.69689 17.284 17.143 17.84 0 103 23 8 0 0 0 0.00030809 2 4458 88.177 66.491 1 0.82398 0.97233 0 132230000 69663000 62568000 18776 1129 7076 7243 29410;29411 29410 KIEISQHAK 9 2 0 Unmodified _KIEISQHAK_ 0 0 1 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.3063 2 527.306198 1052.59784 81462.73 0.20237 0.00010671 0.076924 4.0562E-05 0.27929 0.00014727 527.306221716355 535.320310131281 17.299 0.539 17.299 17.111 17.65 0 66 18 7 0 0 0 1.0983E-24 2 4460 204.91 144.84 1 0.78714 0.92934 0 45796000 24711000 21085000 18777 1129 7076 7243 29412;29413 29413 KIEISQHAK 9 2 0 Unmodified _KIEISQHAK_ 0 0 1 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 351.8732 3 351.873224 1052.59784 99436.88 -0.010113 -3.5586E-06 -0.53573 -0.00018851 -0.54584 -0.00019207 351.873157760186 357.215789492412 16.591 0.85669 16.591 16.427 17.284 0 134 32 9 0 0 0 0.00053827 2 3705 76.17 54.484 1 0.79735 0.9281 0 190240000 104190000 86052000 18778 1129 7076 7243 29414;29415 29415 KIEISQHAK 9 2 0 Unmodified _KIEISQHAK_ 0 0 1 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.3205 2 527.306198 1052.59784 81210.16 0.23321 0.00012297 -0.32408 -0.00017089 -0.090862 -4.7912E-05 527.306128267725 535.3200018836 16.588 0.64785 16.588 16.448 17.096 0 124 26 9 0 0 0 5.1213E-08 2 3668 164.46 132.13 1 0.78399 0.91132 0 135380000 74548000 60834000 18779 1129 7076 7243 29416;29417 29416 KIEISQHAK 9 2 0 Unmodified _KIEISQHAK_ 0 0 1 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 351.873 3 351.873224 1052.59784 99405.33 -0.27538 -9.6899E-05 -0.32797 -0.0001154 -0.60335 -0.0002123 351.873194919417 357.215902455723 17.375 0.65477 17.375 17.234 17.888 0 183 39 9 0 0 0 0.00089829 2 3781 71.425 63.596 1 0.78341 0.6648 0 49924000 27151000 22773000 18780 1129 7076 7243 29418;29419 29419 KIEISQHAK 9 2 0 Unmodified _KIEISQHAK_ 0 0 1 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.3061 2 527.306198 1052.59784 81928.25 0.10204 5.3807E-05 -0.011045 -5.8244E-06 0.090996 4.7983E-05 527.30619256646 535.32026689501 17.364 0.65477 17.364 17.234 17.888 0 143 39 9 0 0 0 0.026652 1 3794 55.084 55.084 1 0.84538 0.71936 0 29365000 15647000 13718000 18781 1129 7076 7243 29420 29420 KIEISQHAK 9 2 0 Unmodified _KIEISQHAK_ 0 0 1 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 357.2157 3 351.873224 1052.59784 99548.18 -0.41849 -0.00014725 -0.34206 -0.00012036 -0.76055 -0.00026762 351.873297772518 357.215868792551 17.21 0.44701 17.21 17.093 17.54 0 165 33 10 0 0 0 0.04249 1 3309 19.243 16.264 1 0.81933 0.69721 0 36649000 19893000 16755000 18782 1129 7076 7243 29421 29421 KIEISQHAK 9 2 0 Unmodified _KIEISQHAK_ 0 0 1 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.3203 2 527.306198 1052.59784 82244.48 0.00095108 5.0151E-07 -0.20967 -0.00011056 -0.20872 -0.00011006 527.306116099897 535.320197212325 17.219 0.42137 17.219 17.104 17.526 0 171 31 9 0 0 0 0.00115 1 3310 95.775 70.216 1 0.81117 0.68852 0 23790000 12941000 10849000 18783 1129 7076 7243 29422 29422 KIEPFYK 7 2 0 Unmodified _KIEPFYK_ 0 0 1 Q12788;H3BN88 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.7771 2 462.763104 923.511654 87406.94 0.082694 3.8268E-05 0.30918 0.00014308 0.39187 0.00018134 462.76345987188 470.777235041674 39.145 0.87278 39.145 38.874 39.747 0 259 70 5 0 0 0 0.053402 1 17831 66.429 39.633 1 1.2144 1.0384 0 11638000 4977100 6660900 18784 1698 7077 7244 29423 29423 KIEQELTAAK 10 2 0 Unmodified _KIEQELTAAK_ 0 0 1 Q9H444 Q9H444 Q9H444 CHMP4B Charged multivesicular body protein 4b MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.8388 2 565.824421 1129.63429 84318.37 0.51063 0.00028893 0.28187 0.00015949 0.79249 0.00044841 565.824469007839 573.838640255422 25.823 0.17971 25.823 25.725 25.905 0 33 9 6 0 0 0 9.5172E-06 1 11349 108.47 65.871 1 1.5952 1.8543 0 11226000 4047500 7178000 18785 2030 7078 7245 29424 29424 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 2 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.6279 3 568.628113 1702.86251 80524.3 0.24175 0.00013747 0.098298 5.5895E-05 0.34005 0.00019336 568.627981563711 576.642280874707 24.794 0.47216 24.794 24.538 25.011 0 89 18 7 0 0 0 1.4444E-09 2 10523 114.01 94.84 1 0.76438 0.92004 0 35236000 18186000 17050000 18786 2129 7079 7246 29425;29426 29426 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 2 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.4385 2 852.438531 1702.86251 66071.3 0.37394 0.00031876 0.35599 0.00030346 0.72993 0.00062222 852.438354650387 864.460227957802 24.8 0.11514 24.8 24.752 24.867 0 21 5 5 0 0 0 0.041597 1 10514 43.544 37.698 1 0.49891 0.6005 0 5277200 2559900 2717300 18787 2129 7079 7246 29427 29427 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 2 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.6283 3 568.628113 1702.86251 79078.22 0.47672 0.00027108 -0.2148 -0.00012214 0.26192 0.00014894 568.627913849873 576.642204019045 27.263 0.37238 27.263 27.078 27.45 0 116 18 9 0 0 0 0.030432 1 10537 21.42 15.257 1 1.0397 0.97377 0 5510700 2560100 2950500 18788 2129 7079 7246 29428 29428 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 2 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.6423 3 568.628113 1702.86251 80017.75 0.18117 0.00010302 -0.061462 -3.4949E-05 0.11971 6.8068E-05 568.627982917357 576.642287922396 27.217 0.43676 27.217 27.02 27.457 0 101 17 9 0 0 0 0.00024135 2 9996 62.357 49.524 1 0.94876 0.93834 0 4231100 2067300 2163800 18789 2129 7079 7246 29429;29430 29429 KIEVPAQLK 9 2 0 Unmodified _KIEVPAQLK_ 0 0 1 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.3214 2 513.321317 1024.62808 84250.98 0.50253 0.00025796 0.025598 1.314E-05 0.52813 0.0002711 513.321228263176 521.335451115303 47.921 0.57835 47.921 47.598 48.176 3.8147E-06 223 50 6 0 0 0 0.00030675 2 25978 107.1 57.53 1 1.2089 1.4266 0 133200000 65677000 67520000 18790 1945 7080 7247 29431;29432 29432 KIEVPAQLK 9 2 0 Unmodified _KIEVPAQLK_ 0 0 1 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.3353 2 513.321317 1024.62808 84066.79 0.36358 0.00018664 -0.18385 -9.4375E-05 0.17973 9.226E-05 513.321232546148 521.335261353296 45.764 0.64277 45.764 45.563 46.206 0 243 54 6 0 0 0 0.023187 1 25069 56.209 34.762 1 1.1513 1.3356 0 82707000 33368000 49339000 18791 1945 7080 7247 29433 29433 KIEVPAQLK 9 2 0 Unmodified _KIEVPAQLK_ 0 0 1 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.3356 2 513.321317 1024.62808 83889.59 0.19926 0.00010229 -0.045492 -2.3352E-05 0.15377 7.8935E-05 513.321134254296 521.335425608508 54.407 0.88366 54.407 54.038 54.922 0 327 68 8 0 0 0 0.028917 1 26438 53.124 30.887 1 1.9579 1.657 0 14424000 4969900 9453900 18792 1945 7080 7247 29434 29434 KIEVSLQPEVPPSK 14 2 0 Unmodified _KIEVSLQPEVPPSK_ 0 0 1 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.9739 3 517.631129 1549.87156 84595.93 0.30031 0.00015545 0.18665 9.6616E-05 0.48696 0.00025206 517.631085126429 522.974018868538 79.156 1.4384 79.156 78.355 79.793 0 320 89 6 0 0 0 0.018209 2 42732 23.138 18.669 1 1.3794 1.2083 0 2896800 1299700 1597100 18793 2042 7081 7248 29435;29436 29436 KIGFLGLGLMGSGIVSNLLK 20 2 0 Oxidation (M) _KIGFLGLGLM(ox)GSGIVSNLLK_ KIGFLGLGLM(1)GSGIVSNLLK KIGFLGLGLM(61.77)GSGIVSNLLK 0 1 1 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.7421 3 678.399099 2032.17547 75102.01 0.71419 0.00048451 -0.44729 -0.00030344 0.2669 0.00018106 678.733106537537 684.075789455802 132.86 0.24089 132.86 132.78 133.02 0 39 10 7 0 0 0 1.1165E-06 1 86866 61.767 61.767 1 1.9149 2.2416 0 12883000 4313300 8569700 18794 1194;1193 7082 7249 29437 29437 910 KIGFLGLGLMGSGIVSNLLK 20 2 0 Oxidation (M) _KIGFLGLGLM(ox)GSGIVSNLLK_ KIGFLGLGLM(1)GSGIVSNLLK KIGFLGLGLM(84.5)GSGIVSNLLK 0 1 1 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.077 3 678.399099 2032.17547 73945.88 0.91116 0.00061813 -0.22721 -0.00015414 0.68395 0.00046399 678.733233824371 683.741700320491 132.8 0.18961 132.8 132.71 132.9 0 55 10 8 0 0 0 1.1231E-07 2 89018 84.499 81.058 1 1.7862 2.043 0 17134000 6984200 10150000 18795 1194;1193 7082 7249 29438;29439 29438 910 KINPSEDVGSK 11 2 0 Unmodified _KINPSEDVGSK_ 0 0 1 Q8WYP5;B3KVE5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.3236 2 587.309135 1172.60372 77366.25 0.04441 2.6082E-05 0.69892 0.00041048 0.74333 0.00043656 587.309551058223 595.323634187701 19.429 0.20788 19.429 19.324 19.531 0 19 6 5 0 0 0 0.010922 1 5160 54.259 29.74 1 1.9318 1.683 0 3218400 1028600 2189700 18796 1945 7083 7250 29440 29440 KIPDPDSDDVSEVDAR 16 1 1 Unmodified _KIPDPDSDDVSEVDAR_ 0 0 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.4156 2 879.413045 1756.81154 64969.92 0.59446 0.00052278 0.29492 0.00025936 0.88938 0.00078214 879.914826166263 888.424783688805 49.147 0.34133 49.147 48.942 49.283 0 86 25 5 0 0 0 5.7384E-06 2 26933 89.231 89.231 1 0.81131 0.9128 0 22106000 10197000 11909000 18797 695 7084 7251 29441;29442 29442 KIPDPDSDDVSEVDAR 16 1 1 Unmodified _KIPDPDSDDVSEVDAR_ 0 0 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.6111 3 586.611122 1756.81154 78964.07 0.62588 0.00036715 -0.052528 -3.0814E-05 0.57335 0.00033633 586.611087509197 592.618323388952 49.138 0.76753 49.138 48.768 49.535 0 243 56 8 0 0 0 2.2737E-09 1 26977 89.311 89.311 1 0.69177 0.83153 0 77890000 45142000 32748000 18798 695 7084 7251 29443 29443 KIPDPDSDDVSEVDAR 16 1 1 Unmodified _KIPDPDSDDVSEVDAR_ 0 0 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.4136 2 879.413045 1756.81154 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.292 1 49.292 48.792 49.792 0 0 0 0 0.01749 1 27037 51.546 38.346 1 18799 695 7084 7251 29444 29444 KIPDPDSDDVSEVDAR 16 1 1 Unmodified _KIPDPDSDDVSEVDAR_ 0 0 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 879.412 2 879.413045 1756.81154 69466.71 -0.036595 -3.2182E-05 1.2344 0.0010856 1.1978 0.0010534 879.915141934971 888.926544180844 47.69 0.27277 47.69 47.58 47.852 0 35 20 5 0 0 0 0.0002538 1 26553 62.14 62.14 1 0.50986 0.58205 0 20807000 12624000 8182300 18800 695 7084 7251 29445 29445 KIPDPDSDDVSEVDAR 16 1 1 Unmodified _KIPDPDSDDVSEVDAR_ 0 0 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.6108 3 586.611122 1756.81154 79355.89 0.24038 0.00014101 0.34217 0.00020072 0.58255 0.00034173 586.61108032402 592.618632481607 47.772 0.56521 47.772 47.474 48.039 0 175 40 6 0 0 0 2.7053E-09 1 26604 79.332 79.332 1 0.72576 0.85384 0 76088000 43625000 32463000 18801 695 7084 7251 29446 29446 KIPDPDSDDVSEVDAR 16 1 1 Unmodified _KIPDPDSDDVSEVDAR_ 0 0 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.4243 2 879.413045 1756.81154 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.722 1 47.722 47.222 48.222 -3.8147E-06 0 0 0 0.0031291 1 26587 66.215 49.837 1 18802 695 7084 7251 29447 29447 KIPDTVLEK 9 2 0 Unmodified _KIPDTVLEK_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.8108 2 521.810782 1041.60701 83435.43 0.51095 0.00026662 0.16553 8.6374E-05 0.67648 0.00035299 521.810770911027 529.825194765758 39.366 0.49637 39.366 39.14 39.637 0 205 40 7 0 0 0 0.016278 1 20327 59.931 17.062 1 0.5813 0.68602 0 110720000 68079000 42639000 18803 1665 7085 7252 29448 29448 KIPDTVLEK 9 2 0 Unmodified _KIPDTVLEK_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.8253 2 521.810782 1041.60701 83626.63 0.23041 0.00012023 -0.17453 -9.1071E-05 0.055879 2.9158E-05 521.810683557645 529.824840015366 37.842 0.5071 37.842 37.627 38.134 0 181 38 7 0 0 0 0.0094088 1 19674 66.27 28.712 1 0.59769 0.69562 0 184730000 112740000 71983000 18804 1665 7085 7252 29449 29449 KIPDTVLEK 9 2 0 Unmodified _KIPDTVLEK_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.811 2 521.810782 1041.60701 83950.52 0.32132 0.00016767 0.033164 1.7305E-05 0.35448 0.00018497 521.810757961696 529.824878783683 44.338 0.81638 44.338 44.058 44.874 3.8147E-06 222 56 7 0 0 0 0.030486 1 21008 52.278 20.344 1 0.33296 0.28485 0 10473000 8034200 2439100 18805 1665 7085 7252 29450 29450 KIPNPDFFEDLEPFR 15 1 1 Unmodified _KIPNPDFFEDLEPFR_ 0 0 1 P27824 P27824 P27824 CANX Calnexin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.9812 3 621.98071 1862.9203 NaN NaN NaN -0.062696 -3.8995E-05 NaN NaN NaN NaN 119.56 0.92824 119.56 119.05 119.97 0 0 0 0 0.0058402 1 76771 33.307 16.427 1 NaN NaN 0 5903100 5903100 0 18806 1526 7086 7253 29451 29451 KIPNPDFFEDLEPFR 15 1 1 Unmodified _KIPNPDFFEDLEPFR_ 0 0 1 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.9816 3 621.98071 1862.9203 77986.08 0.577 0.00035888 0.11114 6.9127E-05 0.68814 0.00042801 622.315079899769 627.988267569061 118.67 0.81292 118.67 118.23 119.04 -7.6294E-06 244 50 7 0 0 0 0.00014303 2 77858 46.89 40.684 1 0.85518 0.97813 0 21972000 8614100 13358000 18807 1526 7086 7253 29452;29453 29452 KIPNPDFFEDLEPFR 15 1 1 Unmodified _KIPNPDFFEDLEPFR_ 0 0 1 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.3159 3 621.98071 1862.9203 78439.69 0.61139 0.00038027 0.13447 8.3638E-05 0.74586 0.00046391 622.315052738701 627.988561235811 130.18 1.1405 130.18 129.81 130.95 0 227 54 7 0 0 0 0.0020839 1 78701 27.85 27.85 1 0.47247 0.40327 0 2851200 2058300 792940 18808 1526 7086 7253 29454 29454 KIPNPDFFEDLEPFR 15 1 1 Unmodified _KIPNPDFFEDLEPFR_ 0 0 1 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.3156 3 621.98071 1862.9203 78659.45 0.9376 0.00058317 0.24162 0.00015028 1.1792 0.00073345 621.980679813931 627.988546793704 129.86 1.1072 129.86 129.55 130.66 0 209 42 8 0 0 0 0.0075028 1 77624 20.939 20.939 1 0.43197 0.3651 0 3682000 2802700 879310 18809 1526 7086 7253 29455 29455 KITAFVPNDGCLNFIEENDEVLVAGFGR 28 1 1 Unmodified _KITAFVPNDGCLNFIEENDEVLVAGFGR_ 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1048.5286 3 1042.18512 3123.53354 58894.86 0.68578 0.00071471 -0.48338 -0.00050377 0.2024 0.00021094 1042.51790316029 1048.86046541276 132.51 0.40038 132.51 132.34 132.74 0 141 25 11 0 0 0 0.00029373 2 86529 30.135 29.461 1 0.68412 0.74562 0 16179000 8637200 7542200 18810 744 7087 7254 29456;29457 29457 KITAFVPNDGCLNFIEENDEVLVAGFGR 28 1 1 Unmodified _KITAFVPNDGCLNFIEENDEVLVAGFGR_ 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1048.5269 3 1042.18512 3123.53354 58879.15 0.80433 0.00083826 -0.53698 -0.00055964 0.26735 0.00027862 1042.5183100083 1048.86088417829 132.42 0.44016 132.42 132.21 132.65 0 138 24 11 0 0 0 2.1385E-07 2 88688 47.099 47.099 1 0.66219 0.75105 0 17217000 9465100 7751600 18811 744 7087 7254 29458;29459 29459 KITAFVPNDGCLNFIEENDEVLVAGFGR 28 1 1 Unmodified _KITAFVPNDGCLNFIEENDEVLVAGFGR_ 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1042.52 3 1042.18512 3123.53354 59199.11 0.53452 0.00055707 -0.49305 -0.00051385 0.041471 4.322E-05 1042.51950182454 1048.52695461888 134.54 0.59415 134.54 134.3 134.9 0 134 18 14 0 0 0 2.1373E-19 1 82171 79.663 73.943 1 1.3477 1.2329 0 244780000 99846000 144930000 18812 744 7087 7254 29460 29460 KITAFVPNDGCLNFIEENDEVLVAGFGR 28 1 1 Unmodified _KITAFVPNDGCLNFIEENDEVLVAGFGR_ 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1042.8535 3 1042.18512 3123.53354 58281.4 0.37621 0.00039208 -0.78015 -0.00081306 -0.40394 -0.00042099 1042.51878897852 1048.52658598443 134.49 0.43195 134.49 134.28 134.71 0 132 14 15 0 0 0 4.4591E-20 2 81252 85.814 80.439 1 1.4485 1.2435 0 225030000 85513000 139520000 18813 744 7087 7254 29461;29462 29462 KITDGLHALQEASNK 15 2 0 Unmodified _KITDGLHALQEASNK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.2761 3 542.293288 1623.85803 84188.76 0.45462 0.00024654 0.056294 3.0528E-05 0.51091 0.00027707 542.29294350754 547.636172908495 49.12 0.57822 49.12 48.977 49.555 0 94 49 4 0 0 0 0.035251 1 27688 22.911 22.911 1 0.93317 1.0676 0 17701000 9520600 8180600 18814 69 7088 7255 29463 29463 KITDGLHALQEASNK 15 2 0 Unmodified _KITDGLHALQEASNK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.6356 3 542.293288 1623.85803 81597.33 0.55455 0.00030073 -0.32058 -0.00017385 0.23396 0.00012688 542.293139701028 547.635990850225 58.406 0.64508 58.406 58.189 58.834 0 195 49 5 0 0 0 0.0012706 3 29779 37.438 37.438 1 1.8901 1.6257 0 6566300 2209300 4357000 18815 69 7088 7255 29464;29465;29466 29465 KITDGLHALQEASNK 15 2 0 Unmodified _KITDGLHALQEASNK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.6361 3 542.293288 1623.85803 83011.57 0.47161 0.00025575 -0.26708 -0.00014484 0.20453 0.00011091 542.627248475217 547.635964420299 58.563 0.57167 58.563 58.247 58.818 0 186 44 5 0 0 0 0.0018399 1 29129 36.112 36.112 1 1.9644 1.6681 0 5969200 2016300 3952900 18816 69 7088 7255 29467 29467 KITEAIGIISK 11 2 0 Unmodified _KITEAIGIISK_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.8658 2 586.866089 1171.71762 78531.2 0.31428 0.00018444 0.12579 7.3823E-05 0.44007 0.00025826 586.866040049149 594.880393027997 71.634 1.2972 71.634 70.674 71.971 0 425 90 7 0 0 0 0.036864 1 37592 42.976 30.929 1 1.6785 1.4339 0 13705000 5713400 7991800 18817 908 7089 7256 29468 29468 KITEAIGIISK 11 2 0 Unmodified _KITEAIGIISK_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.8803 2 586.866089 1171.71762 79045.05 0.076481 4.4884E-05 0.43085 0.00025285 0.50733 0.00029773 586.866177369612 594.880560168333 71.662 1.1837 71.662 71.039 72.223 0 339 78 6 0 0 0 0.0016103 2 36909 71.153 56.48 1 1.6853 1.4216 0 8178800 2918300 5260500 18818 908 7089 7256 29469;29470 29470 KITEAIGIISK 11 2 0 Unmodified _KITEAIGIISK_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.8622 2 586.866089 1171.71762 79927.16 0.16028 9.4063E-05 -0.26702 -0.00015671 -0.10674 -6.2645E-05 586.865302303392 594.880481851278 70.929 0.74664 70.929 70.486 71.233 0 167 58 4 0 0 0 0.03882 1 36545 44.299 31.208 1 2.1018 1.7988 0 4403400 1382500 3020900 18819 908 7089 7256 29471 29471 KITIADCGQLE 11 1 0 Unmodified _KITIADCGQLE_ 0 0 1 V9HWF5;A8K486;P62937;B4DM82 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.3193 2 624.318645 1246.62274 78800.06 0.37778 0.00023586 0.62878 0.00039256 1.0066 0.00062842 624.319113792655 628.326203742465 62.639 0.64966 62.639 62.195 62.845 0 128 60 4 0 0 0 0.03581 2 35918 43.297 41.164 1 4.375 4.4482 0 18046000 3934100 14112000 18820 731 7090 7257 29472;29473 29473 KITIADCGQLE 11 1 0 Unmodified _KITIADCGQLE_ 0 0 1 V9HWF5;A8K486;P62937;B4DM82 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.3214 2 624.318645 1246.62274 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.115 1 61.115 60.615 61.615 3.8147E-06 0 0 0 0.021401 1 35791 63.216 32.529 1 18821 731 7090 7257 29474 29474 KITIADCGQLE 11 1 0 Unmodified _KITIADCGQLE_ 0 0 1 V9HWF5;A8K486;P62937;B4DM82 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.3265 2 624.318645 1246.62274 80250.56 0.32948 0.0002057 -0.12403 -7.7437E-05 0.20544 0.00012826 624.318296975263 628.325935119386 72.53 0.43566 72.53 72.369 72.805 0 151 37 6 0 0 0 0.032106 1 37473 44.425 32.935 1 1.4069 1.1381 0 4353700 1396700 2957000 18822 731 7090 7257 29475 29475 KITVVPSAK 9 2 0 Unmodified _KITVVPSAK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.8029 2 471.80276 941.590967 87480.15 0.24156 0.00011397 0.19789 9.3364E-05 0.43945 0.00020733 471.80273012265 479.816928556601 27.943 0.39107 27.943 27.779 28.17 0 159 26 8 0 0 0 0.00054585 2 13075 102.01 43.191 1 1.2621 1.4895 0 113020000 48558000 64465000 18823 1183 7091 7258 29476;29477 29477 KITVVPSAK 9 2 0 Unmodified _KITVVPSAK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.817 2 471.80276 941.590967 86735.22 0.43573 0.00020558 0.089166 4.2069E-05 0.52489 0.00024765 471.802790930972 479.816926256104 26.953 0.46625 26.953 26.786 27.252 0 95 22 7 0 0 0 4.0969E-05 1 12281 114.39 60.237 1 1.3272 1.5421 0 122600000 54201000 68402000 18824 1183 7091 7258 29478 29478 KITVVPSAK 9 2 0 Unmodified _KITVVPSAK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 479.8171 2 471.80276 941.590967 86796.15 0.090276 4.2593E-05 0.24018 0.00011332 0.33046 0.00015591 471.802779876407 479.81695665558 31.023 0.80633 31.023 30.735 31.542 0 228 50 8 0 0 0 0.019406 2 12951 58.246 26.943 1 1.6285 1.3868 0 25565000 9425100 16140000 18825 1183 7091 7258 29479;29480 29479 KITVVPSAK 9 2 0 Unmodified _KITVVPSAK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.8025 2 471.80276 941.590967 86543.48 0.11865 5.5981E-05 0.24227 0.0001143 0.36092 0.00017029 471.802827611901 479.816915939008 30.759 0.72422 30.759 30.488 31.212 0 184 38 8 0 0 0 0.050392 1 12285 46.001 17.895 1 1.6681 1.4158 0 23521000 8580300 14940000 18826 1183 7091 7258 29481 29481 KKEELLK 7 3 0 Unmodified _KKEELLK_ 0 0 2 P42766;F2Z388;A0A024R866 P42766 P42766 RPL35 60S ribosomal protein L35 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.2815 2 444.28166 886.548768 88166.06 -0.10291 -4.5723E-05 0.36259 0.00016109 0.25968 0.00011537 444.281706995515 456.303017954905 17.814 0.49007 17.814 17.683 18.173 0 100 26 7 0 0 0 1.19E-05 1 4877 151.56 22.007 1 0.54136 0.65161 0 80371000 51082000 29289000 18827 1567 7092 7259 29482 29482 KKPNATRPVTPPR 13 2 2 Unmodified _KKPNATRPVTPPR_ 0 0 3 A0A024RBP2;P36873;F8W0W8;B4DNE3 A0A024RBP2 A0A024RBP2 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 375.2328 4 366.221672 1460.85758 97913.86 -0.28578 -0.00010466 0.41363 0.00015148 0.12784 4.6819E-05 366.472646414752 375.232924973698 15.73 0.48041 15.73 15.583 16.063 0 209 42 6 0 0 0 0.0017419 3 3229 45.257 45.257 1 1.7267 2.1486 0 4600800 1529100 3071600 18828 343 7093 7260 29483;29484;29485 29484 KKPNPVEEEPSR 12 2 1 Unmodified _KKPNPVEEEPSR_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.9311 3 470.584291 1408.73104 86470.09 0.37543 0.00017667 -0.22283 -0.00010486 0.1526 7.181E-05 470.584164145066 479.263096916411 16.58 0.68605 16.58 16.361 17.047 0 158 27 10 0 0 0 0.00017512 2 3885 62.088 62.088 1 1.6577 1.9787 0 76440000 29081000 47359000 18829 1569 7094 7261 29486;29487 29487 KKPNPVEEEPSR 12 2 1 Unmodified _KKPNPVEEEPSR_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.5845 3 470.584291 1408.73104 86492.58 -0.22762 -0.00010711 0.37203 0.00017507 0.14441 6.7958E-05 470.584401624684 479.263297744404 15.263 0.65418 15.263 15.057 15.711 0 175 33 9 0 0 0 4.3229E-08 1 2916 115.34 115.34 1 1.473 1.8998 0 144750000 58731000 86015000 18830 1569 7094 7261 29488 29488 KKPNPVEEEPSR 12 2 1 Unmodified _KKPNPVEEEPSR_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.3733 2 705.372798 1408.73104 72729.34 0.29134 0.0002055 0.35634 0.00025135 0.64768 0.00045685 705.373065377419 718.391328243246 15.263 0.6065 15.263 15.057 15.663 0 99 28 7 0 0 0 0.0016571 1 2922 88.596 88.596 1 1.6926 2.183 0 52304000 19068000 33237000 18831 1569 7094 7261 29489 29489 KKPNPVEEEPSR 12 2 1 Unmodified _KKPNPVEEEPSR_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 470.5844 3 470.584291 1408.73104 87035.55 -0.08966 -4.2193E-05 0.22611 0.0001064 0.13645 6.4212E-05 470.584552099099 479.263284893394 16.606 0.49595 16.606 16.473 16.969 0 163 38 9 0 0 0 0.00021182 1 2998 74.237 74.237 1 2.9853 2.9063 0 24538000 6446400 18092000 18832 1569 7094 7261 29490 29490 KLDAEDVIGSR 11 1 1 Unmodified _KLDAEDVIGSR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 407.5582 3 401.550698 1201.63027 93729.04 0.16313 6.5507E-05 0.35831 0.00014388 0.52145 0.00020939 401.55071646136 407.558333377925 48.248 0.57878 48.248 47.965 48.543 0 175 47 5 0 0 0 0.0023108 2 26174 42.789 26.256 1 1.6077 1.9137 0 47373000 20130000 27243000 18833 1569 7095 7262 29491;29492 29491 KLDAEDVIGSR 11 1 1 Unmodified _KLDAEDVIGSR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.8228 2 601.822409 1201.63027 77766.83 0.69084 0.00041576 -0.077197 -4.6459E-05 0.61364 0.0003693 601.822441918881 610.833625156909 48.222 0.78521 48.222 47.863 48.648 0 383 64 9 0 0 0 0.00046091 2 26244 89.548 70.768 1 1.475 1.7917 0 396550000 145620000 250930000 18834 1569 7095 7262 29493;29494 29493 KLDAEDVIGSR 11 1 1 Unmodified _KLDAEDVIGSR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.8238 2 601.822409 1201.63027 78203.08 0.66051 0.00039751 -0.092196 -5.5486E-05 0.56831 0.00034202 601.822195638008 610.83365100946 46.605 0.83784 46.605 46.173 47.011 -3.8147E-06 324 68 8 0 0 0 5.3681E-08 2 25637 120.32 92.143 1 1.6819 2.0004 0 432170000 159810000 272360000 18835 1569 7095 7262 29495;29496 29495 KLDAEDVIGSR 11 1 1 Unmodified _KLDAEDVIGSR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.8342 2 601.822409 1201.63027 78147.78 0.51615 0.00031063 -0.1406 -8.4615E-05 0.37555 0.00022602 601.822480838232 610.833532611198 55.112 1.0927 55.112 54.747 55.839 0 338 70 9 0 0 0 0.03172 1 27448 44.543 26.231 1 2.8119 2.4715 0 32847000 8332200 24514000 18836 1569 7095 7262 29497 29497 KLDAEDVIGSR 11 1 1 Unmodified _KLDAEDVIGSR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.8341 2 601.822409 1201.63027 77842.41 0.41358 0.0002489 -0.09434 -5.6776E-05 0.31924 0.00019213 601.822383760554 610.833588966507 55.415 1.0887 55.415 55.077 56.166 0 265 67 8 0 0 0 0.013682 1 27077 51.286 30.983 1 2.8701 2.4392 0 28439000 7207100 21232000 18837 1569 7095 7262 29498 29498 KLDAGNQLALIEELHK 16 2 0 Unmodified _KLDAGNQLALIEELHK_ 0 0 1 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.3386 3 598.003626 1790.98905 79987.88 0.52964 0.00031673 -0.36263 -0.00021685 0.16701 9.9871E-05 598.337777197093 603.345482319338 99.645 0.3155 99.645 99.46 99.775 0 62 18 5 0 0 0 0.0037321 1 56319 31.233 31.233 1 0.8976 0.77506 0 4761800 1857500 2904300 18838 1205 7096 7263 29499 29499 KLDEAVAEAHLGK 13 2 0 Unmodified _KLDEAVAEAHLGK_ 0 0 1 P23526;Q1RMG2 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.9081 3 460.920903 1379.74088 90940.6 0.62497 0.00028806 0.70036 0.00032281 1.3253 0.00061088 460.920805250958 466.264371784048 35.809 0.29256 35.809 35.632 35.924 0 70 21 5 0 0 0 0.041525 1 18278 22.985 22.985 1 0.93046 1.0597 0 9509700 4906500 4603200 18839 1512 7097 7264 29500 29500 KLDEEALLK 9 2 0 Unmodified _KLDEEALLK_ 0 0 1 O43290;B4DDH9 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.8084 2 529.808239 1057.60193 NaN NaN NaN -0.0074852 -3.9657E-06 NaN NaN NaN NaN 48.304 0.34105 48.304 48.177 48.518 0 0 0 0 5.5319E-05 1 27012 104.01 9.7518 1 NaN NaN 0 10537000 10537000 0 18840 1384 7098 7265 29501 29501 KLDELYGTWR 10 1 1 Unmodified _KLDELYGTWR_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.8469 2 640.83532 1279.65609 75424.45 0.65744 0.00042131 0.24315 0.00015582 0.90059 0.00057713 640.835375724039 649.846694670399 69.032 1.2374 69.032 68.496 69.733 0 539 105 6 0 0 0 0.0013412 2 40035 82.749 81.017 1 0.70436 0.849 0 119480000 72597000 46885000 18841 1548 7099 7266 29502;29503 29502 KLDELYGTWR 10 1 1 Unmodified _KLDELYGTWR_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.8459 2 640.83532 1279.65609 74973.2 0.64656 0.00041434 -0.19059 -0.00012213 0.45597 0.0002922 640.835288932671 649.845917486105 66.614 1.3384 66.614 66.185 67.523 0 547 110 7 0 0 0 0.00042867 2 39517 92.239 78.785 1 0.63545 0.74824 0 87384000 53932000 33451000 18842 1548 7099 7266 29504;29505 29505 KLDELYGTWR 10 1 1 Unmodified _KLDELYGTWR_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.8358 2 640.83532 1279.65609 74404.79 0.46534 0.00029821 0.32509 0.00020833 0.79044 0.00050654 640.835441879359 649.846666054889 77.233 1.3366 77.233 76.811 78.147 -7.6294E-06 485 89 8 0 0 0 0.0090979 2 41246 69.672 57.144 1 0.95035 0.83619 0 34620000 18234000 16386000 18843 1548 7099 7266 29506;29507 29507 KLDELYGTWR 10 1 1 Unmodified _KLDELYGTWR_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.8472 2 640.83532 1279.65609 75337.66 0.59396 0.00038063 0.2305 0.00014771 0.82446 0.00052834 640.835360415145 649.846642402521 77.351 1.4721 77.351 77.02 78.492 0 499 94 8 0 0 0 0.0012361 1 40551 82.029 82.029 1 0.92646 0.78814 0 34801000 17668000 17133000 18844 1548 7099 7266 29508 29508 KLDGIPDCDISPVQIR 16 1 1 Unmodified _KLDGIPDCDISPVQIR_ 0 0 1 A8K1M4;Q9H081;I3L4K6 A8K1M4 A8K1M4 MIS12 Protein MIS12 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.6622 3 609.320738 1824.94038 77831.77 0.43051 0.00026232 0.031398 1.9132E-05 0.46191 0.00028145 609.320971118374 615.328593107319 103.58 0.40758 103.58 103.46 103.87 0 69 26 5 0 0 0 0.038106 1 58889 10.376 5.3743 1 0.84623 0.70129 0 3853900 2195900 1658000 18845 704 7100 7267 29509 29509 KLDPGSEETQTLVR 14 1 1 Unmodified _KLDPGSEETQTLVR_ 0 0 1 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.9531 3 524.945777 1571.8155 84182.39 0.60156 0.00031579 -0.11669 -6.1256E-05 0.48487 0.00025453 524.945820078261 531.287579401092 46.219 0.6232 46.219 46.01 46.633 0 162 53 6 0 0 0 0.0061196 1 24950 32.702 32.702 1 3.1897 3.5178 0 18227000 3636000 14591000 18846 1522 7101 7268 29510 29510 KLDPGSEETQTLVR 14 1 1 Unmodified _KLDPGSEETQTLVR_ 0 0 1 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.9533 3 524.945777 1571.8155 82881.21 0.61574 0.00032323 -0.4843 -0.00025423 0.13144 6.8996E-05 525.280518210167 530.953037165154 44.725 0.468 44.725 44.478 44.946 0 118 34 8 0 0 0 0.0022847 1 24448 37.555 24.677 1 2.7748 3.1844 0 24350000 4912700 19437000 18847 1522 7101 7268 29511 29511 KLDPGSEETQTLVR 14 1 1 Unmodified _KLDPGSEETQTLVR_ 0 0 1 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.9524 3 524.945777 1571.8155 82799.88 0.29865 0.00015677 -0.42169 -0.00022137 -0.12305 -6.4593E-05 524.94576313514 530.952942859401 53.356 0.58799 53.356 53.075 53.663 0 207 43 8 0 0 0 0.002368 2 26422 36.993 32.813 1 1.5911 1.3113 0 5257500 2263600 2993900 18848 1522 7101 7268 29512;29513 29512 KLDSLTTSFGFPVGAATLVDEVGVDVAK 28 2 0 Unmodified _KLDSLTTSFGFPVGAATLVDEVGVDVAK_ 0 0 1 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.8408 3 946.170807 2835.49059 61852.2 0.7549 0.00071427 -0.41757 -0.00039509 0.33733 0.00031918 946.505437400684 951.848155692639 133.24 0.25177 133.24 133.07 133.32 0 42 7 13 0 0 0 2.9693E-35 2 87208 120.52 120.52 1 1.0155 1.1986 0 92426000 46311000 46115000 18849 1228 7102 7269 29514;29515 29515 KLDSLTTSFGFPVGAATLVDEVGVDVAK 28 2 0 Unmodified _KLDSLTTSFGFPVGAATLVDEVGVDVAK_ 0 0 1 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 946.5064 3 946.170807 2835.49059 61613.69 0.77128 0.00072976 0.60587 0.00057326 1.3772 0.001303 946.506130223271 952.183015248839 133.21 0.42862 133.21 133.05 133.48 0 43 12 12 0 0 0 1.9493E-17 1 89437 74.382 74.382 1 1.052 1.222 0 112340000 51804000 60540000 18850 1228 7102 7269 29516 29516 KLDYGQHVVAGTPGR 15 1 1 Unmodified _KLDYGQHVVAGTPGR_ 0 0 1 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.2934 3 533.286356 1596.83724 87465.86 0.56307 0.00030028 -0.34457 -0.00018376 0.2185 0.00011652 533.286347512982 539.293497387966 33.677 0.35937 33.677 33.516 33.875 0 68 35 4 0 0 0 0.00016041 1 16779 53.168 53.168 1 2.338 2.5316 0 10264000 3795100 6468900 18851 261 7103 7270 29517 29517 KLEAAEDIAYQLSR 14 1 1 Unmodified _KLEAAEDIAYQLSR_ 0 0 1 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.286 3 536.286022 1605.83624 82202.04 0.7814 0.00041905 -0.31508 -0.00016897 0.46633 0.00025008 536.285797855051 542.293434103936 80.851 0.83708 80.851 80.542 81.379 0 246 70 6 0 0 0 4.9928E-05 2 49468 60.209 55.885 1 1.29 1.4889 0 30090000 12347000 17743000 18852 730 7104 7271 29518;29519 29519 KLEAAEDIAYQLSR 14 1 1 Unmodified _KLEAAEDIAYQLSR_ 0 0 1 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.2929 3 536.286022 1605.83624 80008.15 0.62618 0.00033581 -0.043294 -2.3218E-05 0.58288 0.00031259 536.286144461603 542.293414126106 93.482 0.83199 93.482 93.087 93.919 0 242 54 7 0 0 0 5.3179E-05 2 52125 67.605 67.605 1 2.7631 2.3908 0 14947000 4248000 10699000 18853 730 7104 7271 29520;29521 29521 KLEAAEDIAYQLSR 14 1 1 Unmodified _KLEAAEDIAYQLSR_ 0 0 1 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.4263 2 803.925394 1605.83624 70677.85 0.63991 0.00051444 -0.10037 -8.0689E-05 0.53954 0.00043375 804.427077625648 812.936251402757 93.474 0.54395 93.474 93.187 93.731 7.6294E-06 142 34 7 0 0 0 0.0085809 1 52166 44.299 38.196 1 2.0394 1.6713 0 4680600 1466400 3214300 18854 730 7104 7271 29522 29522 KLEAAEDIAYQLSR 14 1 1 Unmodified _KLEAAEDIAYQLSR_ 0 0 1 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.2933 3 536.286022 1605.83624 80050.82 0.44995 0.0002413 0.2242 0.00012023 0.67415 0.00036154 536.285891026682 542.293392645211 93.308 0.93633 93.308 92.785 93.721 0 251 59 7 0 0 0 0.012461 2 51146 25.558 25.558 1 2.6347 2.2283 0 10526000 2751500 7774800 18855 730 7104 7271 29523;29524 29524 KLEAAEDIAYQLSR 14 1 1 Unmodified _KLEAAEDIAYQLSR_ 0 0 1 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.9275 2 803.925394 1605.83624 68485.42 0.47024 0.00037804 -0.47488 -0.00038177 -0.004641 -3.731E-06 804.427133937147 812.935648443415 93.295 0.63524 93.295 92.967 93.603 0 150 38 6 0 0 0 0.060836 1 51225 29.341 22.957 1 2.3819 2.0031 0 4483500 1286800 3196700 18856 730 7104 7271 29525 29525 KLEAGIR 7 1 1 Unmodified _KLEAGIR_ 0 0 1 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.7447 2 393.745245 785.475937 93294.7 -0.1673 -6.5873E-05 -0.15874 -6.2504E-05 -0.32604 -0.00012838 393.745062019778 402.75637342875 20.501 0.66199 20.501 20.371 21.033 0 101 29 6 0 0 0 2.0838E-06 1 6925 154.11 13.39 1 1.219 1.4749 0 216990000 83375000 133610000 18857 1691 7105 7272 29526 29526 KLEAGIR 7 1 1 Unmodified _KLEAGIR_ 0 0 1 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.7449 2 393.745245 785.475937 96004.77 0.068508 2.6975E-05 -0.25214 -9.9277E-05 -0.18363 -7.2303E-05 393.745027572206 402.756333037219 20.118 0.7199 20.118 19.977 20.697 0 76 24 6 0 0 0 0.00042055 1 6416 146.94 18.19 1 1.2083 1.4295 0 184730000 81183000 103550000 18858 1691 7105 7272 29527 29527 KLEAQETLNEEDK 13 2 0 Unmodified _KLEAQETLNEEDK_ 0 0 1 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.8851 2 773.883392 1545.75223 69388.99 0.64368 0.00049813 0.36036 0.00027888 1.004 0.00077701 773.884135725153 781.897665754312 27.456 0.36156 27.456 27.295 27.657 0 89 22 7 0 0 0 4.5031E-122 2 12644 254.18 217.5 1 0.98492 1.1754 0 19952000 10144000 9808800 18859 1260 7106 7273 29528;29529 29529 KLEAQETLNEEDK 13 2 0 Unmodified _KLEAQETLNEEDK_ 0 0 1 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.2581 3 516.25802 1545.75223 85206.63 0.40661 0.00020991 0.38563 0.00019909 0.79224 0.000409 516.258108578739 521.601096778629 27.46 0.40327 27.46 27.162 27.565 0 71 21 5 0 0 0 1.6321E-05 1 12659 76.01 71.251 1 0.78145 0.93336 0 19113000 10011000 9101300 18860 1260 7106 7273 29530 29530 KLEAQETLNEEDK 13 2 0 Unmodified _KLEAQETLNEEDK_ 0 0 1 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.8975 2 773.883392 1545.75223 69359.27 0.762 0.0005897 -0.058248 -4.5077E-05 0.70375 0.00054462 773.883221145183 781.897558465843 26.717 0.23369 26.717 26.588 26.822 0 61 10 8 0 0 0 3.9618E-142 2 12067 272.92 248.07 1 0.90876 1.0528 0 57760000 28253000 29507000 18861 1260 7106 7273 29531;29532 29531 KLEAQETLNEEDK 13 2 0 Unmodified _KLEAQETLNEEDK_ 0 0 1 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.2582 3 516.25802 1545.75223 83154.4 0.54516 0.00028145 0.064232 3.316E-05 0.6094 0.00031461 516.257954870923 521.600818303941 26.725 0.26965 26.725 26.572 26.842 0 46 12 5 0 0 0 7.3735E-07 2 12090 94.673 83.819 1 1.0358 1.1977 0 36033000 16796000 19237000 18862 1260 7106 7273 29533;29534 29533 KLEAQETLNEEDK 13 2 0 Unmodified _KLEAQETLNEEDK_ 0 0 1 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 781.8989 2 773.883392 1545.75223 69831.93 0.6222 0.00048151 0.083736 6.4802E-05 0.70594 0.00054631 773.883734408222 781.897654966412 31.513 0.57107 31.513 31.305 31.876 -1.9073E-06 140 30 9 0 0 0 0.014923 1 12806 43.405 37.559 1 2.4114 2.0441 0 6382900 1858500 4524300 18863 1260 7106 7273 29535 29535 KLEEALMADILSR 13 1 1 Unmodified _KLEEALMADILSR_ 0 0 1 Q9UBB5;O60535;Q69YZ5 Q9UBB5 Q9UBB5 MBD2;NY-CO-41;DKFZp586O0821 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 753.9197 2 744.908159 1487.80176 73646.52 0.69252 0.00051586 0.20788 0.00015485 0.9004 0.00067071 744.90812034676 753.919947466636 116.26 0.33498 116.26 116.09 116.43 -7.6294E-06 43 14 5 0 0 0 0.030645 1 68290 46.704 40.321 1 1.9493 1.779 0 1614000 718180 895810 18864 2096 7107 7274 29536 29536 KLEEEEAEVK 10 2 0 Unmodified _KLEEEEAEVK_ 0 0 1 H7C2P4;B4DEG9;H7C128;H7C179;B4DN43;B5MCW3;H7C127;B2R5V7;A8K1N6;Q9H0E9 H7C2P4 H7C2P4 BRD8 Bromodomain-containing protein 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.3087 2 602.3088 1202.60305 NaN NaN NaN 1.2854 0.00077422 NaN NaN NaN NaN 20.808 0.27456 20.808 20.665 20.94 0 0 0 0 0.0030005 1 7116 78.488 40.939 1 NaN NaN 0 4225300 4225300 0 18865 705 7108 7275 29537 29537 KLEEEQIILEDQNCK 15 2 0 Unmodified _KLEEEQIILEDQNCK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.9933 3 630.315541 1887.92479 75685.66 0.36875 0.00023243 0.22768 0.00014351 0.59644 0.00037594 630.316485694511 635.658384270886 62 0.80908 62 61.628 62.437 0 302 66 6 0 0 0 1.0654E-07 2 35632 104 104 1 1.7488 2.0715 0 29008000 10944000 18064000 18866 81 7109 7276 29538;29539 29539 KLEEEQIILEDQNCK 15 2 0 Unmodified _KLEEEQIILEDQNCK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.316 3 630.315541 1887.92479 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.871 1 61.871 61.371 62.371 0 0 0 0 0.00073525 1 35463 55.335 34.981 1 18867 81 7109 7276 29540 29540 KLEEEQIILEDQNCK 15 2 0 Unmodified _KLEEEQIILEDQNCK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.6589 3 630.315541 1887.92479 75237.58 0.63002 0.00039711 -0.022636 -1.4268E-05 0.60739 0.00038285 630.315579247829 635.658352047178 59.927 0.70951 59.927 59.502 60.212 0 297 57 7 0 0 0 3.791E-06 1 34785 89.136 89.136 1 1.6125 1.8603 0 29452000 12502000 16950000 18868 81 7109 7276 29541 29541 KLEEEQIILEDQNCK 15 2 0 Unmodified _KLEEEQIILEDQNCK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.9922 3 630.315541 1887.92479 75581.55 0.21675 0.00013662 0.20033 0.00012627 0.41708 0.00026289 630.650073934729 635.658470653739 70.594 0.7543 70.594 70.364 71.118 0 275 48 9 0 0 0 7.0257E-05 2 37042 60.861 56.957 1 2.4073 2.0605 0 9500100 2967900 6532200 18869 81 7109 7276 29542;29543 29542 KLEEEQIILEDQNCK 15 2 0 Unmodified _KLEEEQIILEDQNCK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.6591 3 630.315541 1887.92479 75473.12 0.18668 0.00011767 0.19961 0.00012582 0.38629 0.00024349 630.316877618747 635.658546695031 70.963 0.79451 70.963 70.752 71.547 0 260 53 8 0 0 0 9.5306E-05 2 36460 58.723 56.854 1 2.7503 2.3235 0 10692000 3020000 7672400 18870 81 7109 7276 29544;29545 29544 KLEEIPK 7 2 0 Unmodified _KLEEIPK_ 0 0 1 A0A0S2Z489;O00232;A0A0S2Z476 A0A0S2Z489 A0A0S2Z489 PSMD12 26S proteasome non-ATPase regulatory subunit 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 428.7603 2 428.760561 855.506569 92577.92 -0.18283 -7.8389E-05 -0.16841 -7.2206E-05 -0.35123 -0.0001506 428.760545331797 436.774507274645 23.736 0.33792 23.736 23.62 23.958 0 46 12 6 0 0 0 0.040537 1 9593 90.308 6.2109 1 2.2416 2.591 0 32998000 12049000 20949000 18871 558 7110 7277 29546 29546 KLEELEK 7 2 0 Unmodified _KLEELEK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.7694 2 444.755475 887.496398 88857.19 -0.13514 -6.0105E-05 -0.037172 -1.6533E-05 -0.17231 -7.6638E-05 444.755408878052 452.769611635948 20.85 0.66982 20.85 20.66 21.33 0 167 29 11 0 0 0 0.017238 1 7210 125.31 5.908 1 1.1406 1.3456 0 228930000 92588000 136340000 18872 1183 7111 7278 29547 29547 KLEELEK 7 2 0 Unmodified _KLEELEK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.7695 2 444.755475 887.496398 NaN NaN NaN -0.19772 -8.7935E-05 NaN NaN NaN NaN 20.464 0.54849 20.464 20.28 20.829 0 0 0 0 0.00028217 1 6727 124.98 8.2577 1 NaN NaN 0 170110000 0 170110000 18873 1183 7111 7278 29548 29548 KLEELEK 7 2 0 Unmodified _KLEELEK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 452.7697 2 444.755475 887.496398 87357.72 -0.23379 -0.00010398 0.047597 2.1169E-05 -0.18619 -8.2809E-05 444.755545138145 452.769614371944 22.111 0.81543 22.111 21.938 22.753 0 126 32 10 0 0 0 0.017003 2 6937 111.95 8.1141 1 1.6136 1.3694 0 49326000 18103000 31223000 18874 1183 7111 7278 29549;29550 29549 KLEELEK 7 2 0 Unmodified _KLEELEK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 452.7694 2 444.755475 887.496398 88223.46 -0.31408 -0.00013969 0.22783 0.00010133 -0.086253 -3.8361E-05 444.755537558533 452.769744618607 21.875 0.61992 21.875 21.718 22.338 0 95 23 10 0 0 0 0.02571 1 6324 99.139 7.2852 1 1.5818 1.3436 0 26780000 9630500 17150000 18875 1183 7111 7278 29551 29551 KLEELELDEQQK 12 2 0 Unmodified _KLEELELDEQQK_ 0 0 1 P36507;A0A1B0GUL7 P36507 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.3904 2 751.390853 1500.76715 72766.83 0.74109 0.00055685 -0.12294 -9.2376E-05 0.61815 0.00046447 751.390467971075 759.404967755093 48.245 0.45451 48.245 48.067 48.521 0 117 37 5 0 0 0 0.0022748 1 26315 61.344 51.39 1 3.0459 3.624 0 17448000 3899300 13549000 18876 1547 7112 7279 29552 29552 KLEELELDEQQK 12 2 0 Unmodified _KLEELELDEQQK_ 0 0 1 P36507;A0A1B0GUL7 P36507 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2902 3 501.262994 1500.76715 85238.12 0.51055 0.00025592 -0.38138 -0.00019117 0.12917 6.4749E-05 501.262256822033 506.605791553722 48.284 0.55968 48.284 48.067 48.627 3.8147E-06 144 45 5 0 0 0 0.02456 1 26297 27.676 24.32 1 2.4766 2.9333 0 16030000 6192800 9837600 18877 1547 7112 7279 29553 29553 KLEELELDEQQK 12 2 0 Unmodified _KLEELELDEQQK_ 0 0 1 P36507;A0A1B0GUL7 P36507 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.4066 2 751.390853 1500.76715 NaN NaN NaN 0.13503 0.00010146 NaN NaN NaN NaN 46.607 0.39762 46.607 46.382 46.779 0 0 0 0 0.0017856 1 25649 74.46 42.702 1 NaN NaN 0 13662000 0 13662000 18878 1547 7112 7279 29554 29554 KLEGQYLYLK 10 2 0 Unmodified _KLEGQYLYLK_ 0 0 1 REV__B4DKV5 REV__B4DKV5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.9079 3 418.907934 1253.70197 90985.73 0.34131 0.00014298 -0.3589 -0.00015035 -0.017588 -7.3679E-06 418.907963581448 424.250530174624 41.058 1.078 41.058 40.815 41.893 0 489 89 10 0 0 0 0.0033968 1 21457 41.54 2.3921 1 0.92062 1.0853 0 979270000 480930000 498350000 + 18879 2165 7113 7280 29555 29555 KLEGQYLYLK 10 2 0 Unmodified _KLEGQYLYLK_ 0 0 1 REV__B4DKV5 REV__B4DKV5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 424.2507 3 418.907934 1253.70197 91163.02 0.47312 0.00019819 -0.19953 -8.3586E-05 0.27358 0.00011461 418.907813639041 424.250646720187 39.837 1.3827 39.837 39.173 40.556 0 683 119 8 0 0 0 0.02581 1 20951 24.291 1.5709 1 0.90916 1.0621 0 477750000 259390000 218360000 + 18880 2165 7113 7280 29556 29556 KLEGQYLYLK 10 2 0 Unmodified _KLEGQYLYLK_ 0 0 1 REV__B4DKV5 REV__B4DKV5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 424.2508 3 418.907934 1253.70197 90997.93 -0.45975 -0.00019259 0.38841 0.00016271 -0.071345 -2.9887E-05 418.908020649937 424.250872497865 46.814 1.4681 46.814 46.265 47.733 0 550 103 9 0 0 0 0.03504 1 22448 19.659 1.9931 1 1.0846 0.92554 0 17095000 7960800 9133700 + 18881 2165 7113 7280 29557 29557 KLELSDNIISGGLEVLAEK 19 2 0 Unmodified _KLELSDNIISGGLEVLAEK_ 0 0 1 Q53F20;Q9BTT0;Q5TB19;B4E0D5;E9PLC4 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.0559 3 676.712289 2027.11504 75156.8 0.93322 0.00063152 0.37267 0.00025219 1.3059 0.00088371 676.713038582971 682.055153252298 132.17 0.34177 132.17 131.93 132.27 1.5259E-05 92 15 9 0 0 0 2.6987E-05 2 80241 35.015 35.015 1 0.96261 0.8316 0 4517800 2424000 2093800 18882 1784 7114 7281 29558;29559 29558 KLELSDNIISGGLEVLAEK 19 2 0 Unmodified _KLELSDNIISGGLEVLAEK_ 0 0 1 Q53F20;Q9BTT0;Q5TB19;B4E0D5;E9PLC4 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.0563 3 676.712289 2027.11504 73335.2 1.0756 0.00072785 1.2469 0.00084377 2.3224 0.0015716 677.047951695997 682.055326577902 131.86 0.29459 131.86 131.65 131.95 0 56 10 8 0 0 0 5.9583E-06 2 79152 42.639 42.639 1 0.90233 0.76188 0 7439700 3976100 3463600 18883 1784 7114 7281 29560;29561 29560 KLEQCNTELK 10 2 0 Unmodified _KLEQCNTELK_ 0 0 1 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.8389 2 631.824095 1261.63364 79367.91 0.12583 7.9505E-05 -0.1056 -6.672E-05 0.020235 1.2785E-05 631.824109019416 639.838359362134 21.314 0.20508 21.314 21.178 21.383 0 28 8 8 0 0 0 0.022982 1 6401 49.35 20.624 1 1.1799 1.0305 0 3067400 1405200 1662200 18884 803 7115 7282 29562 29562 KLEQCNTELK 10 2 0 Unmodified _KLEQCNTELK_ 0 0 1 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.8389 2 631.824095 1261.63364 76478.46 0.1559 9.8502E-05 -0.020389 -1.2882E-05 0.13551 8.562E-05 631.824093326089 639.838366198098 21.06 0.35125 21.06 20.875 21.226 0 71 17 6 0 0 0 0.013096 1 5780 56.916 22.529 1 1.4862 1.2999 0 1511700 629750 881940 18885 803 7115 7282 29563 29563 KLERPPETPTVDPTVK 16 2 1 Unmodified _KLERPPETPTVDPTVK_ 0 0 2 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.6832 3 603.003514 1805.98871 77756.12 0.33474 0.00020185 0.084641 5.1039E-05 0.41938 0.00025289 603.337700804951 611.682501607538 52.785 0.74291 52.785 52.425 53.168 0 350 58 8 0 0 0 0.021943 1 25417 20.368 20.368 1 1.832 1.7835 0 8835300 3042400 5792900 18886 515 7116 7283 29564 29564 KLESILAQDQDLK 13 2 0 Unmodified _KLESILAQDQDLK_ 0 0 1 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.9471 3 500.947117 1499.81952 NaN NaN NaN 1.2159 0.00060909 NaN NaN NaN NaN 67.335 0.29054 67.335 67.119 67.409 0 0 0 0 0.017792 1 38912 29.491 16.372 1 NaN NaN 0 4549400 4549400 0 18887 1708 7117 7284 29565 29565 KLESILAQDQDLK 13 2 0 Unmodified _KLESILAQDQDLK_ 0 0 1 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.29 3 500.947117 1499.81952 87748.86 0.28654 0.00014354 0.12165 6.0943E-05 0.40819 0.00020448 500.94715943829 506.2896367959 76 0.36367 76 75.808 76.172 0 71 24 5 0 0 0 0.0098204 2 40503 29.733 25.185 1 1.2386 1.1007 0 2183000 875650 1307400 18888 1708 7117 7284 29566;29567 29567 KLESILAQDQDLK 13 2 0 Unmodified _KLESILAQDQDLK_ 0 0 1 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.4188 2 750.917038 1499.81952 NaN NaN NaN -0.33444 -0.00025114 NaN NaN NaN NaN 76.005 0.33261 76.005 75.822 76.155 0 0 0 0 0.040776 1 40484 41.339 26.66 1 NaN NaN 0 1457600 1457600 0 18889 1708 7117 7284 29568 29568 KLESILAQDQDLK 13 2 0 Unmodified _KLESILAQDQDLK_ 0 0 1 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.2819 3 500.947117 1499.81952 87360.2 0.07293 3.6534E-05 0.50606 0.00025351 0.57899 0.00029004 501.281889401834 506.290138396734 76.101 0.43708 76.101 75.903 76.34 0 103 28 7 0 0 0 0.020063 2 39749 23.842 23.842 1 0.71546 0.62881 0 1933200 1033500 899760 18890 1708 7117 7284 29569;29570 29569 KLETAVNLAWTAGNSNTR 18 1 1 Unmodified _KLETAVNLAWTAGNSNTR_ 0 0 1 A0A1L1UHR1;P21796;B3KTS5 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3489 3 649.341189 1945.00174 75299.67 0.77051 0.00050032 -0.10456 -6.7896E-05 0.66595 0.00043243 649.341374975452 655.348580283873 79.09 1.0373 79.09 78.589 79.626 0 475 93 8 0 0 0 8.3109E-06 2 46882 64.298 64.298 1 1.4324 1.7265 0 120000000 54431000 65568000 18891 639 7118 7285 29571;29572 29572 KLETAVNLAWTAGNSNTR 18 1 1 Unmodified _KLETAVNLAWTAGNSNTR_ 0 0 1 A0A1L1UHR1;P21796;B3KTS5 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.3491 3 649.341189 1945.00174 74685.48 0.72702 0.00047208 -0.15952 -0.00010358 0.5675 0.0003685 649.341008396394 655.34853400661 77.246 1.0417 77.246 76.85 77.891 0 478 85 7 0 0 0 4.2326E-06 1 46686 74.793 74.793 1 1.4194 1.6711 0 85335000 34802000 50533000 18892 639 7118 7285 29573 29573 KLETAVNLAWTAGNSNTR 18 1 1 Unmodified _KLETAVNLAWTAGNSNTR_ 0 0 1 A0A1L1UHR1;P21796;B3KTS5 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 982.5206 2 973.508145 1945.00174 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.228 1 77.228 76.728 77.728 0 0 0 0 0.024865 1 46690 45.614 32.847 1 18893 639 7118 7285 29574 29574 KLETAVNLAWTAGNSNTR 18 1 1 Unmodified _KLETAVNLAWTAGNSNTR_ 0 0 1 A0A1L1UHR1;P21796;B3KTS5 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.6752 3 649.341189 1945.00174 74720.69 0.81949 0.00053213 -0.47485 -0.00030834 0.34464 0.00022379 649.340885978325 655.348329894187 89.346 1.0003 89.346 89.104 90.104 0 275 64 8 0 0 0 6.3835E-06 2 49362 66.068 66.068 1 2.4533 2.1376 0 21193000 7011700 14181000 18894 639 7118 7285 29575;29576 29575 KLETAVNLAWTAGNSNTR 18 1 1 Unmodified _KLETAVNLAWTAGNSNTR_ 0 0 1 A0A1L1UHR1;P21796;B3KTS5 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.3488 3 649.341189 1945.00174 73867.84 0.37787 0.00024537 -0.28992 -0.00018826 0.087948 5.7109E-05 649.675551758777 655.348540940614 89.14 1.1302 89.14 88.863 89.993 -7.6294E-06 272 71 8 0 0 0 5.529E-13 2 48375 111.01 111.01 1 2.3083 1.9579 0 19082000 6005500 13076000 18895 639 7118 7285 29577;29578 29577 KLETEETVPETDVETK 16 2 0 Unmodified _KLETEETVPETDVETK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 932.4791 2 924.459661 1846.90477 63443.25 0.92717 0.00085713 -0.027606 -2.5521E-05 0.89956 0.00083161 924.459115073718 932.473900502498 45.267 0.44643 45.267 45.058 45.505 0 116 39 6 0 0 0 6.6548E-05 2 24298 84.468 84.468 1 0.91121 1.0759 0 41399000 18741000 22659000 18896 836;1683 7119 7286 29579;29580 29579 KLETEETVPETDVETK 16 2 0 Unmodified _KLETEETVPETDVETK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 924.4593 2 924.459661 1846.90477 64103.52 0.88926 0.00082209 -0.19706 -0.00018217 0.69221 0.00063992 924.458887609696 932.473993897241 43.965 0.3662 43.965 43.774 44.14 0 129 30 6 0 0 0 1.8398E-33 2 23994 184.99 184.99 1 0.68522 0.79309 0 45972000 24967000 21005000 18897 836;1683 7119 7286 29581;29582 29582 KLETEETVPETDVETK 16 2 0 Unmodified _KLETEETVPETDVETK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.9852 3 616.642199 1846.90477 76270.29 0.3325 0.00020503 -0.47421 -0.00029242 -0.14171 -8.7383E-05 616.642155518509 621.984946291765 53.255 0.72689 53.255 52.949 53.676 0 299 52 8 0 0 0 0.00021816 1 25861 34.202 34.202 1 1.1698 0.99 0 14322000 6592800 7729400 18898 836;1683 7119 7286 29583 29583 KLETNPDIK 9 2 0 Unmodified _KLETNPDIK_ 0 0 1 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.2976 2 529.298039 1056.58152 83503.76 0.055247 2.9242E-05 -0.62816 -0.00033249 -0.57292 -0.00030324 529.296980807632 537.312498754203 23.2 0.38403 23.2 23.03 23.414 -1.9073E-06 57 18 5 0 0 0 0.0012795 1 9130 94.692 37.103 1 0.638 0.75942 0 22678000 11912000 10766000 18899 125 7120 7287 29584 29584 KLETNPDIKPSNVEPMEK 18 3 0 Oxidation (M) _KLETNPDIKPSNVEPM(ox)EK_ KLETNPDIKPSNVEPM(1)EK KLETNPDIKPSNVEPM(49.71)EK 0 1 2 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.0234 3 695.689267 2084.04597 73015.23 0.53624 0.00037306 0.28045 0.00019511 0.8167 0.00056817 696.023557182721 704.038075763855 40.028 0.49928 40.028 39.741 40.24 0 208 40 7 0 0 0 1.861E-05 1 20844 49.708 45.674 1 0.95732 1.1523 0 21455000 12082000 9372400 18900 125 7121 7288 29585 29585 109 KLETNPDIKPSNVEPMEK 18 3 0 Oxidation (M) _KLETNPDIKPSNVEPM(ox)EK_ KLETNPDIKPSNVEPM(1)EK KLETNPDIKPSNVEPM(84.49)EK 0 1 2 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.0237 3 695.689267 2084.04597 72500.7 0.42478 0.00029551 -0.0073855 -5.138E-06 0.41739 0.00029038 695.689195380625 704.037872558711 38.12 0.3576 38.12 37.946 38.303 0 143 27 7 0 0 0 9.6572E-07 2 19961 84.493 84.493 1 1.0443 1.2206 0 37957000 16688000 21269000 18901 125 7121 7288 29586;29587 29587 109 KLEVNEAELLR 11 1 1 Unmodified _KLEVNEAELLR_ 0 0 1 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.5933 3 438.585632 1312.73507 90926.73 0.059788 2.6222E-05 1.3099 0.00057452 1.3697 0.00060074 438.585658517481 444.593160680768 70.955 0.75654 70.955 70.554 71.31 0 272 60 6 0 0 0 7.1866E-05 2 41248 73.632 58.43 1 1.0318 1.2039 0 31265000 15679000 15587000 18902 1017 7122 7289 29588;29589 29588 KLEVNEAELLR 11 1 1 Unmodified _KLEVNEAELLR_ 0 0 1 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3857 2 657.374809 1312.73507 NaN NaN NaN -1.2711 -0.00083557 NaN NaN NaN NaN 70.923 0.83781 70.923 70.414 71.252 0 0 0 0 0.0060451 1 41284 64.266 31.851 1 NaN NaN 0 19382000 0 19382000 18903 1017 7122 7289 29590 29590 KLEVNEAELLR 11 1 1 Unmodified _KLEVNEAELLR_ 0 0 1 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3854 2 657.374809 1312.73507 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.55 1 68.55 68.05 69.05 -7.6294E-06 0 0 0 0.015123 1 40745 65.5 38.828 1 18904 1017 7122 7289 29591 29591 KLEVNEAELLR 11 1 1 Unmodified _KLEVNEAELLR_ 0 0 1 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 438.2428 3 438.585632 1312.73507 95220.51 0.089472 3.9241E-05 0.46921 0.00020579 0.55868 0.00024503 438.585604469077 444.593197973339 68.823 0.80036 68.823 68.29 69.091 0 233 67 5 0 0 0 0.012949 1 40951 43.549 32.336 1 1.0498 1.2102 0 28805000 12268000 16538000 18905 1017 7122 7289 29592 29592 KLEVNEAELLR 11 1 1 Unmodified _KLEVNEAELLR_ 0 0 1 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.3757 2 657.374809 1312.73507 76135.04 0.48521 0.00031897 0.085944 5.6498E-05 0.57116 0.00037546 657.374768032551 666.386057068241 80.038 0.6152 80.038 79.822 80.437 0 148 37 7 0 0 0 0.042814 1 43173 41.164 28.374 1 0.89107 0.75464 0 8339700 4276900 4062800 18906 1017 7122 7289 29593 29593 KLEVNEAELLR 11 1 1 Unmodified _KLEVNEAELLR_ 0 0 1 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 444.5931 3 438.585632 1312.73507 91811.51 -0.20093 -8.8126E-05 0.24108 0.00010574 0.040152 1.761E-05 438.585656050252 444.593059018159 80.059 0.57745 80.059 79.765 80.342 0 104 24 6 0 0 0 0.0093934 1 43221 26.969 18.456 1 0.87792 0.74298 0 3083600 1723000 1360700 18907 1017 7122 7289 29594 29594 KLEVNEAELLR 11 1 1 Unmodified _KLEVNEAELLR_ 0 0 1 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.3864 2 657.374809 1312.73507 77018.11 0.50048 0.000329 0.059143 3.8879E-05 0.55962 0.00036788 657.374758530664 666.38601456841 80.147 0.46852 80.147 79.967 80.435 0 146 26 8 0 0 0 0.0025014 1 42382 67.08 56.25 1 0.94327 0.79771 0 10300000 5050400 5249700 18908 1017 7122 7289 29595 29595 KLEVNEAELLR 11 1 1 Unmodified _KLEVNEAELLR_ 0 0 1 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 444.5929 3 438.585632 1312.73507 92170.16 -0.043426 -1.9046E-05 0.069075 3.0295E-05 0.025649 1.1249E-05 438.585650737527 444.59296930118 80.153 0.50415 80.153 79.931 80.435 0 105 24 7 0 0 0 0.0032636 2 42412 35.594 28.937 1 0.88349 0.74641 0 3718000 1874000 1844000 18909 1017 7122 7289 29596;29597 29596 KLGAGEGGEASVSPEK 16 2 0 Unmodified _KLGAGEGGEASVSPEK_ 0 0 1 E7ETY2;B4DRA2;Q9UFD4;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.887 2 758.386102 1514.75765 71898.35 0.5113 0.00038776 -0.17604 -0.00013351 0.33525 0.00025425 758.386207243096 766.400628646669 22.738 0.21306 22.738 22.63 22.843 -1.9073E-06 20 9 4 0 0 0 0.012454 1 8713 45.257 40.316 1 0.43805 0.50325 0 4366600 2996200 1370300 18910 1712;1225 7123 7290 29598 29598 KLGAGEGGEASVSPEK 16 2 0 Unmodified _KLGAGEGGEASVSPEK_ 0 0 1 E7ETY2;B4DRA2;Q9UFD4;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.9268 3 505.926493 1514.75765 84299.74 0.18945 9.5849E-05 0.37476 0.0001896 0.56421 0.00028545 505.926494415889 511.269218664408 25.635 0.3903 25.635 25.396 25.786 -1.9073E-06 59 15 7 0 0 0 0.0072558 1 9443 24.3 24.3 1 0.29398 0.25693 0 3024800 2403500 621250 18911 1712;1225 7123 7290 29599 29599 KLGAGEGGEASVSPEK 16 2 0 Unmodified _KLGAGEGGEASVSPEK_ 0 0 1 E7ETY2;B4DRA2;Q9UFD4;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.9265 3 505.926493 1514.75765 85327.38 0.34434 0.00017421 -0.38518 -0.00019488 -0.040842 -2.0663E-05 505.926262801747 511.269503523343 25.638 0.35328 25.638 25.422 25.775 0 52 13 6 0 0 0 0.0049334 1 8939 28.869 28.869 1 0.20906 0.18176 0 2545200 2029700 515520 18912 1712;1225 7123 7290 29600 29600 KLGALTAEEIALK 13 2 0 Unmodified _KLGALTAEEIALK_ 0 0 1 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 452.9417 3 452.941415 1355.80242 92921.73 0.14734 6.6734E-05 0.07952 3.6018E-05 0.22686 0.00010275 452.941430252454 458.284127586236 89.826 0.36781 89.826 89.648 90.016 0 67 22 5 0 0 0 0.046957 1 49721 11.262 11.262 1 1.196 1.069 0 1824500 821650 1002800 18913 1717 7124 7291 29601 29601 KLGNNCVFAPADVTSEK 17 2 0 Unmodified _KLGNNCVFAPADVTSEK_ 0 0 1 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.6439 3 617.308609 1848.904 81526.16 0.27393 0.0001691 0.3225 0.00019908 0.59644 0.00036819 617.643252436407 622.651458421244 71.686 0.33629 71.686 71.43 71.766 0 73 24 5 0 0 0 0.041442 1 37772 8.6445 8.6445 1 1.5464 1.3833 0 1919700 655310 1264400 18914 555 7125 7292 29602 29602 KLNEQVTQEQPLK 13 2 0 Unmodified _KLNEQVTQEQPLK_ 0 0 1 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.4291 2 777.927937 1553.84132 74198.05 0.65132 0.00050668 -0.85402 -0.00066437 -0.2027 -0.00015769 778.428147936707 786.44292941162 35.112 0.2486 35.112 34.993 35.241 -3.8147E-06 63 21 4 0 0 0 0.0081008 1 17580 48.004 48.004 1 1.0865 1.2587 0 10510000 4603200 5906900 18915 1741 7126 7293 29603 29603 KLNEQVTQEQPLK 13 2 0 Unmodified _KLNEQVTQEQPLK_ 0 0 1 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.9421 2 777.927937 1553.84132 69622.73 0.59723 0.0004646 0.050493 3.928E-05 0.64772 0.00050388 777.928028884638 785.941986514325 33.767 0.3026 33.767 33.555 33.858 0 79 23 5 0 0 0 1.6339E-05 4 16958 100.38 81.631 1 1.4418 1.6455 0 12860000 6815300 6044300 18916 1741 7126 7293 29604;29605;29606;29607 29607 KLNEQVTQEQPLK 13 2 0 Unmodified _KLNEQVTQEQPLK_ 0 0 1 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.2896 3 518.954383 1553.84132 88252.45 0.078765 4.0875E-05 0.20652 0.00010717 0.28528 0.00014805 518.95417093547 524.296972378694 40.021 0.50519 40.021 39.808 40.313 0 146 42 6 0 0 0 0.01538 1 17822 21.351 21.351 1 1.2299 1.0636 0 2841600 1246500 1595100 18917 1741 7126 7293 29608 29608 KLNEQVTQEQPLK 13 2 0 Unmodified _KLNEQVTQEQPLK_ 0 0 1 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 777.9279 2 777.927937 1553.84132 69683.31 0.39399 0.0003065 -0.15289 -0.00011893 0.2411 0.00018756 777.927637518277 785.94214292149 40.015 0.50519 40.015 39.808 40.313 0 210 42 6 0 0 0 0.014627 1 17832 43.604 37.163 1 1.3738 1.1713 0 5107500 1883900 3223600 18918 1741 7126 7293 29609 29609 KLPAIALDLLR 11 1 1 Unmodified _KLPAIALDLLR_ 0 0 1 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.8985 2 611.897723 1221.78089 79798.63 0.77737 0.00047567 0.062291 3.8115E-05 0.83967 0.00051379 611.897834751573 620.908819400622 112.75 0.77257 112.75 112.4 113.18 0 223 54 6 0 0 0 0.0068 2 71137 58.699 46.171 1 0.95025 1.0172 0 13323000 7358500 5965000 18919 1997 7127 7294 29610;29611 29611 KLPAIALDLLR 11 1 1 Unmodified _KLPAIALDLLR_ 0 0 1 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.8974 2 611.897723 1221.78089 79064.49 0.5805 0.00035521 -0.22992 -0.00014069 0.35058 0.00021452 611.897346922158 620.908910504073 111.41 0.87392 111.41 111.01 111.89 7.6294E-06 224 59 5 0 0 0 0.0035463 2 71818 62.303 60.332 1 0.88371 0.98636 0 11434000 5893400 5540900 18920 1997 7127 7294 29612;29613 29613 KLPAIALDLLR 11 1 1 Unmodified _KLPAIALDLLR_ 0 0 1 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.2678 3 408.267574 1221.78089 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.3 1 111.3 110.8 111.8 7.6294E-06 0 0 0 0.046752 1 71792 37.144 22.47 1 18921 1997 7127 7294 29614 29614 KLPAIALDLLR 11 1 1 Unmodified _KLPAIALDLLR_ 0 0 1 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.8979 2 611.897723 1221.78089 78436.73 0.68432 0.00041873 -0.019837 -1.2138E-05 0.66448 0.0004066 611.897748298631 620.908969444673 122.01 0.41962 122.01 121.74 122.16 0 99 20 8 0 0 0 0.0061248 2 72648 59.426 59.025 1 1.0959 0.94471 0 12375000 6286700 6088500 18922 1997 7127 7294 29615;29616 29616 KLPAIALDLLR 11 1 1 Unmodified _KLPAIALDLLR_ 0 0 1 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 414.2751 3 408.267574 1221.78089 99657.97 0.15177 6.1962E-05 0.097822 3.9937E-05 0.24959 0.0001019 408.267592672004 414.275074031429 122.01 0.39996 122.01 121.81 122.21 -7.6294E-06 61 19 5 0 0 0 0.035832 1 72626 16.472 14.493 1 1.0302 0.85546 0 3719600 1891000 1828600 18923 1997 7127 7294 29617 29617 KLPEELGR 8 1 1 Unmodified _KLPEELGR_ 0 0 1 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.2859 2 471.274367 940.53418 87842.95 0.26727 0.00012596 0.030279 1.427E-05 0.29755 0.00014023 471.274358320155 480.285497139257 28.156 0.14656 28.156 28.056 28.203 0 25 6 6 0 0 0 0.014655 1 13364 77.282 55.151 1 1.612 1.8898 0 56500000 20437000 36063000 18924 415 7128 7295 29618 29618 KLPEEVVK 8 2 0 Unmodified _KLPEEVVK_ 0 0 1 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.287 2 471.286943 940.559333 88260.3 0.33333 0.0001571 -0.38332 -0.00018065 -0.04999 -2.3559E-05 471.287158624126 479.300116041977 28.889 0.28838 28.889 28.759 29.048 0 72 14 8 0 0 0 0.004784 1 13797 98.629 29.843 1 1.0063 1.1877 0 85614000 43143000 42471000 18925 1411 7129 7296 29619 29619 KLPGFPTQDDEVMMLTER 18 1 1 2 Oxidation (M) _KLPGFPTQDDEVM(ox)M(ox)LTER_ KLPGFPTQDDEVM(1)M(1)LTER KLPGFPTQDDEVM(52.61)M(52.61)LTER 0 2 1 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.6811 3 713.67474 2138.00239 69844.49 0.65681 0.00046875 0.8614 0.00061476 1.5182 0.0010835 714.012705049065 719.681904155311 88.349 0.77282 88.349 87.991 88.763 0 186 59 5 0 0 0 1.2624E-05 1 53246 52.612 52.612 1 1.1643 1.3307 0 25678000 11688000 13990000 18926 313 7130 7297 29620 29620 228;229 KLPNIK 6 2 0 Unmodified _KLPNIK_ 0 0 1 H0Y9X1;Q96EY4 H0Y9X1 H0Y9X1 TMA16 Translation machinery-associated protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 356.7392 2 356.739431 711.46431 101889.4 -0.025445 -9.0774E-06 -0.074568 -2.6601E-05 -0.10001 -3.5679E-05 356.739327076457 364.75349904283 23.262 0.29901 23.262 23.084 23.383 0 46 12 5 0 0 0 0.041016 1 9153 130.84 0 1 0.66296 0.76003 0 20677000 12272000 8405200 18927 1288 7131 7298 29621 29621 KLQDLAGGIFPEDEIPEK 18 2 0 Unmodified _KLQDLAGGIFPEDEIPEK_ 0 0 1 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.3527 3 667.017601 1998.03097 73364.68 1.0153 0.00067725 0.34971 0.00023326 1.365 0.00091051 667.352144843656 672.360645815334 113.52 0.53722 113.52 113.29 113.82 0 177 25 9 0 0 0 0.00024468 2 66110 29.126 29.126 1 1.0429 0.88885 0 21561000 9882200 11679000 18928 1618 7132 7299 29622;29623 29623 KLQDLAGGIFPEDEIPEK 18 2 0 Unmodified _KLQDLAGGIFPEDEIPEK_ 0 0 1 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.36 3 667.017601 1998.03097 73925 0.65307 0.00043561 0.35006 0.0002335 1.0031 0.0006691 667.018047140077 672.360659836312 113.39 0.58623 113.39 113.14 113.72 0 172 28 9 0 0 0 0.00024468 2 65039 37.672 37.672 1 1.0483 0.88849 0 18653000 9582300 9070600 18929 1618 7132 7299 29624;29625 29624 KLQEVDSLWK 10 2 0 Unmodified _KLQEVDSLWK_ 0 0 1 Q9Y2X3;B4DUY3;F8WED0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 623.3463 2 623.34552 1244.67649 76725.02 0.5872 0.00036603 0.070407 4.3888E-05 0.65761 0.00040992 623.345548898971 631.359697036847 75.105 1.1628 75.105 74.874 76.037 0 441 82 8 0 0 0 6.7971E-05 2 39849 99.283 72.84 1 0.96759 0.82452 0 22414000 11398000 11016000 18930 2129 7133 7300 29626;29627 29626 KLQEVDSLWK 10 2 0 Unmodified _KLQEVDSLWK_ 0 0 1 Q9Y2X3;B4DUY3;F8WED0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.3602 2 623.34552 1244.67649 75990.94 0.44416 0.00027686 0.28126 0.00017532 0.72542 0.00045219 623.345749853424 631.359779341242 75.256 1.2703 75.256 74.95 76.22 0 377 89 9 0 0 0 0.0005522 2 39178 89.827 65.051 1 0.94501 0.80301 0 28764000 14543000 14221000 18931 2129 7133 7300 29628;29629 29629 KLQLSLADFR 10 1 1 Unmodified _KLQLSLADFR_ 0 0 1 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8485 2 595.84823 1189.68191 82393.8 0.7906 0.00047108 0.40618 0.00024202 1.1968 0.0007131 595.848473101029 604.859725204636 88.85 0.5142 88.85 88.535 89.049 7.6294E-06 121 37 6 0 0 0 0.018807 1 53455 52.278 30.192 1 0.73267 0.80161 0 16865000 6995200 9870000 18932 886 7134 7301 29630 29630 KLQLSLADFR 10 1 1 Unmodified _KLQLSLADFR_ 0 0 1 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 604.8596 2 595.84823 1189.68191 79187.43 0.34734 0.00020696 0.34396 0.00020495 0.69131 0.00041191 595.848625979031 604.859495658202 100.41 0.64058 100.41 100.21 100.85 7.6294E-06 194 50 6 0 0 0 0.00063889 1 56829 88.134 51.577 1 1.239 1.049 0 8281200 4434400 3846900 18933 886 7134 7301 29631 29631 KLQLSLADFR 10 1 1 Unmodified _KLQLSLADFR_ 0 0 1 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.8599 2 595.84823 1189.68191 79249.09 0.47343 0.00028209 0.11102 6.6149E-05 0.58444 0.00034824 595.848404841242 604.859423484005 100.07 0.62454 100.07 99.9 100.52 0 186 51 6 0 0 0 0.00013159 1 55733 98.04 67.874 1 1.2285 1.0394 0 11424000 4843400 6580300 18934 886 7134 7301 29632 29632 KLSEEEILENPDLFLTSEATDYGR 24 1 1 Unmodified _KLSEEEILENPDLFLTSEATDYGR_ 0 0 1 Q14257;A8MXP8 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 924.1229 3 923.787022 2768.33924 62925.42 0.70887 0.00065485 0.59988 0.00055416 1.3087 0.001209 924.121727852637 930.129249062135 129.68 0.91257 129.68 129.34 130.25 0 211 41 12 0 0 0 1.86E-09 3 78462 55.881 55.881 1 1.6128 1.406 0 21771000 8996200 12775000 18935 1730 7135 7302 29633;29634;29635 29634 KLSEEEILENPDLFLTSEATDYGR 24 1 1 Unmodified _KLSEEEILENPDLFLTSEATDYGR_ 0 0 1 Q14257;A8MXP8 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 930.1298 3 923.787022 2768.33924 62782.18 0.82488 0.00076202 1.3356 0.0012338 2.1605 0.0019958 924.457254000796 930.129817584053 129.55 1.0223 129.55 129.29 130.31 0 165 41 10 0 0 0 3.0913E-13 2 77438 78.236 71.572 1 1.5091 1.2774 0 12450000 4784000 7665700 18936 1730 7135 7302 29636;29637 29636 KLSGLNAFDIAEELVK 16 2 0 Unmodified _KLSGLNAFDIAEELVK_ 0 0 1 O95983;B3KMA8;K7EIE8;A0A087WT34;A0A087X1H1;A0A0A0MTS6 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.335 3 582.992727 1745.95635 81818.32 1.0529 0.00061384 -0.24979 -0.00014563 0.80312 0.00046822 582.993033852015 588.335160820675 134.15 0.31845 134.15 133.97 134.28 0 53 14 6 0 0 0 9.5059E-05 1 81775 51.535 47.987 1 2.1433 1.8582 0 3538700 1084500 2454200 18937 1432 7136 7303 29638 29638 KLSGLNAFDIAEELVK 16 2 0 Unmodified _KLSGLNAFDIAEELVK_ 0 0 1 O95983;B3KMA8;K7EIE8;A0A087WT34;A0A087X1H1;A0A0A0MTS6 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.3363 3 582.992727 1745.95635 NaN NaN NaN 1.2126 0.00070695 NaN NaN NaN NaN 133.81 0.47952 133.81 133.61 134.09 0 0 0 0 0.049645 1 80776 23.683 12.209 1 NaN NaN 0 5457700 0 5457700 18938 1432 7136 7303 29639 29639 KLSLLNGGLQEEELSTSLK 19 2 0 Unmodified _KLSLLNGGLQEEELSTSLK_ 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.3436 3 687.04756 2058.12085 74308.27 0.61689 0.00042383 -0.63839 -0.0004386 -0.021494 -1.4768E-05 687.047431535082 692.724490950277 112.27 0.28438 112.27 112.13 112.41 0 49 15 6 0 0 0 0.044587 1 64293 16.506 16.506 1 1.6829 1.4478 0 3482400 1590200 1892200 18939 1421 7137 7304 29640 29640 KLTQTSGETTHTDKVPGGEDK 21 3 0 Unmodified _KLTQTSGETTHTDKVPGGEDK_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.0411 4 558.030294 2228.09207 NaN NaN NaN 0.040989 2.2873E-05 NaN NaN NaN NaN 18.716 0.17155 18.716 18.623 18.794 0 0 0 0 0.00019355 1 4217 43.12 34.626 1 NaN NaN 0 2393300 0 2393300 18940 1569 7138 7305 29641 29641 KLTVNPGTK 9 2 0 Unmodified _KLTVNPGTK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.29 2 479.290017 956.565481 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.028 1 20.028 19.528 20.528 0 0 0 0 3.1809E-22 1 6500 166.66 95.987 1 18941 139 7139 7306 29642 29642 KLTVNPGTK 9 2 0 Unmodified _KLTVNPGTK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.3034 2 479.290017 956.565481 85825.62 -0.41655 -0.00019965 -0.29142 -0.00013968 -0.70797 -0.00033932 479.289924392161 487.304190179415 19.73 0.53355 19.73 19.484 20.018 -1.9073E-06 102 24 8 0 0 0 0.00019685 2 6067 109.44 67.368 1 0.60948 0.70914 0 172200000 109460000 62733000 18942 139 7139 7306 29643;29644 29644 KLTVNPGTK 9 2 0 Unmodified _KLTVNPGTK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 319.5024 3 319.862437 956.565481 113834.1 -0.43945 -0.00014057 -0.2138 -6.8388E-05 -0.65326 -0.00020895 319.862245544595 325.205135282257 19.716 0.16629 19.716 19.619 19.785 -1.9073E-06 17 7 4 0 0 0 0.024054 1 6085 28.234 21.289 1 0.5705 0.6554 0 4383900 3017500 1366300 18943 139 7139 7306 29645 29645 KLVGSVNLFSDENVPR 16 1 1 Unmodified _KLVGSVNLFSDENVPR_ 0 0 1 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.3306 3 591.987976 1772.9421 82518.51 0.44062 0.00026084 0.24817 0.00014691 0.6888 0.00040776 592.323078743057 597.995064168799 100.02 0.29024 100.02 99.824 100.11 -7.6294E-06 37 21 4 0 0 0 0.011787 1 56551 13.959 2.8538 1 NaN NaN 0 3251300 972740 2278600 18944 1997 7140 7307 29646 29646 KLVLILNK 8 2 0 Unmodified _KLVLILNK_ 0 0 1 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.8449 2 470.83132 939.648088 88567.01 -0.05123 -2.4121E-05 -0.016941 -7.9764E-06 -0.068171 -3.2097E-05 470.831133982264 478.845493120411 70.447 0.4403 70.447 70.233 70.674 0 111 28 5 0 0 0 0.052281 1 36926 51.43 35.932 1 1.1826 1.0192 0 5668800 2458600 3210200 18945 125 7141 7308 29647 29647 KLVLILNK 8 2 0 Unmodified _KLVLILNK_ 0 0 1 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.8455 2 470.83132 939.648088 88799.9 0.05364 2.5256E-05 0.025773 1.2135E-05 0.079413 3.739E-05 470.831210748118 478.845419507468 70.472 0.48676 70.472 70.266 70.752 0 133 41 4 0 0 0 0.033466 1 36191 58.782 33.332 1 1.1517 0.97842 0 5857100 2787300 3069800 18946 125 7141 7308 29648 29648 KLVWVPSDK 9 2 0 Unmodified _KLVWVPSDK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.3279 2 536.313492 1070.61243 84119.48 0.43611 0.00023389 0.032773 1.7576E-05 0.46889 0.00025147 536.313320971976 544.32767287916 60.754 0.46152 60.754 60.565 61.027 3.8147E-06 120 38 5 0 0 0 0.043689 1 30405 47.603 28.509 1 2.7102 2.3333 0 3373200 795470 2577700 18947 81 7142 7309 29649 29649 KLYDIDVAK 9 2 0 Unmodified _KLYDIDVAK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.8026 2 532.802957 1063.59136 83962.3 0.71195 0.00037933 0.0012572 6.6985E-07 0.7132 0.00038 532.802500921059 540.818017089255 49.35 0.25734 49.35 49.188 49.445 0 40 17 4 0 0 0 0.0084473 1 27069 67.726 39.508 1 0.84469 0.991 0 13433000 7447800 5985400 18948 796 7143 7310 29650 29650 KLYDIDVAK 9 2 0 Unmodified _KLYDIDVAK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.8025 2 532.802957 1063.59136 86240.12 0.66713 0.00035545 -0.61992 -0.00033029 0.047216 2.5157E-05 532.802561394037 541.318336215131 47.459 0.24525 47.459 47.305 47.55 0 51 15 4 0 0 0 0.0025963 1 26404 83.948 52.013 1 0.56892 0.65311 0 22328000 17438000 4889800 18949 796 7143 7310 29651 29651 KLYDIDVAK 9 2 0 Unmodified _KLYDIDVAK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.8174 2 532.802957 1063.59136 81386.09 0.5283 0.00028148 -0.3081 -0.00016416 0.2202 0.00011732 532.802754404297 540.816946866958 56.154 1.1593 56.154 55.878 57.038 3.8147E-06 330 74 9 0 0 0 0.031444 1 28147 51.762 33.777 1 0.86742 0.73705 0 38819000 20983000 17836000 18950 796 7143 7310 29652 29652 KLYDIDVAK 9 2 0 Unmodified _KLYDIDVAK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.8029 2 532.802957 1063.59136 82646.22 0.53599 0.00028558 -0.29422 -0.00015676 0.24176 0.00012881 532.802740670828 540.816959106345 56.408 1.0025 56.408 56.095 57.098 0 362 70 9 0 0 0 0.0031701 1 27697 79.489 52.796 1 0.87022 0.74027 0 34589000 19233000 15356000 18951 796 7143 7310 29653 29653 KMEDSVGCLETAEEVK 16 2 0 Oxidation (M) _KM(ox)EDSVGCLETAEEVK_ KM(1)EDSVGCLETAEEVK KM(79.39)EDSVGCLETAEEVK 0 1 1 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.6245 3 614.28162 1839.82303 77464.09 0.40899 0.00025123 -0.025919 -1.5921E-05 0.38307 0.00023531 614.281693442817 619.624535145497 47.205 0.49991 47.205 47 47.5 3.8147E-06 140 37 5 0 0 0 3.4593E-05 1 26167 79.393 79.393 1 2.2531 2.5852 0 21685000 6111600 15574000 18952 81 7144 7311 29654 29654 61 KMTEIQTPENTPR 13 1 1 Oxidation (M) _KM(ox)TEIQTPENTPR_ KM(1)TEIQTPENTPR KM(67.38)TEIQTPENTPR 0 1 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.899 2 780.887955 1559.76136 68124.69 0.50187 0.0003919 0.11714 9.1477E-05 0.61901 0.00048338 780.887769417654 789.899235538413 24.589 0.22894 24.589 24.479 24.708 0 29 8 6 0 0 0 0.00060941 1 10326 67.385 60.532 1 1.185 1.2669 0 13003000 5372400 7630100 18953 2070 7145 7312 29655 29655 1902 KMTEIQTPENTPR 13 1 1 Oxidation (M) _KM(ox)TEIQTPENTPR_ KM(1)TEIQTPENTPR KM(88.34)TEIQTPENTPR 0 1 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.8997 2 780.887955 1559.76136 70093.19 0.44348 0.00034631 -0.068753 -5.3689E-05 0.37473 0.00029262 780.887522836898 789.899402123179 24.248 0.27613 24.248 24.127 24.403 1.9073E-06 37 10 5 0 0 0 0.00034847 2 10019 88.338 88.338 1 1.2791 1.4184 0 9547200 4754200 4793000 18954 2070 7145 7312 29656;29657 29656 1902 KMTEIQTPENTPR 13 1 1 Oxidation (M) _KM(ox)TEIQTPENTPR_ KM(1)TEIQTPENTPR KM(57.14)TEIQTPENTPR 0 1 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.2631 3 520.927729 1559.76136 83517.56 0.17834 9.29E-05 0.049256 2.5659E-05 0.22759 0.00011856 520.927752888189 526.935346487301 24.291 0.42443 24.291 24.034 24.458 -1.9073E-06 69 17 7 0 0 0 0.00055082 1 10056 57.136 53.709 1 1.1418 1.306 0 22028000 10312000 11716000 18955 2070 7145 7312 29658 29658 1902 KMTEIQTPENTPR 13 1 1 Unmodified _KMTEIQTPENTPR_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.6038 3 515.59609 1543.76644 86518.74 0.28049 0.00014462 0.027042 1.3943E-05 0.30753 0.00015856 515.596071978323 521.603702001913 38.384 0.47186 38.384 38.208 38.68 0 132 31 8 0 0 0 0.00049013 2 17408 52.821 52.821 1 2.0701 1.724 0 3575000 1070300 2504700 18956 2070 7145 7313 29659;29660 29660 KMTEIQTPENTPR 13 1 1 Unmodified _KMTEIQTPENTPR_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.6039 3 515.59609 1543.76644 85964.52 0.070473 3.6336E-05 -0.16675 -8.5976E-05 -0.096277 -4.964E-05 515.595912213782 521.603681606399 38.422 0.38898 38.422 38.219 38.608 0 116 29 7 0 0 0 0.003082 1 16967 34.611 33.655 1 2.4076 2.0605 0 2752400 932120 1820300 18957 2070 7145 7313 29661 29661 KNDMDEPPSGDFGGDEEK 18 2 0 Oxidation (M) _KNDM(ox)DEPPSGDFGGDEEK_ KNDM(1)DEPPSGDFGGDEEK KNDM(78.78)DEPPSGDFGGDEEK 0 1 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.9373 3 661.602186 1981.78473 NaN NaN NaN -0.1012 -6.6954E-05 NaN NaN NaN NaN 27.494 0.47281 27.494 27.3 27.773 0 0 0 0 1.7367E-07 1 12807 78.78 76.478 1 NaN NaN 0 7208900 7208900 0 18958 515 7146 7314 29662 29662 377 KNELLQK 7 2 0 Unmodified _KNELLQK_ 0 0 1 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.7635 2 436.763635 871.512717 88314.73 0.13458 5.8781E-05 0.50476 0.00022046 0.63935 0.00027924 436.763679787494 444.777758066288 19.275 0.26836 19.275 19.127 19.396 0 39 13 7 0 0 0 0.0010101 1 5974 141.83 30.178 1 0.90538 1.0688 0 64666000 34593000 30073000 18959 1813 7147 7315 29663 29663 KNGPLEVAGAAVSAGHGLPAK 21 2 0 Unmodified _KNGPLEVAGAAVSAGHGLPAK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 654.3705 3 648.693563 1943.05886 73906.52 0.5409 0.00035088 -0.060706 -3.938E-05 0.4802 0.0003115 649.027923741617 654.036318961575 77.358 0.88612 77.358 76.938 77.824 0 462 61 10 0 0 0 3.4628E-09 2 41290 81.574 81.574 1 1.1475 0.97473 0 41453000 19737000 21716000 18960 1401 7148 7316 29664;29665 29664 KNGPLEVAGAAVSAGHGLPAK 21 2 0 Unmodified _KNGPLEVAGAAVSAGHGLPAK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 491.0301 4 486.771991 1943.05886 85366.06 0.059859 2.9138E-05 -0.20398 -9.9293E-05 -0.14412 -7.0155E-05 486.771668615159 490.779167170163 77.527 1.1913 77.527 76.938 78.129 -7.6294E-06 283 81 6 0 0 0 1.9345E-05 1 41393 40.137 40.137 1 0.64818 0.55609 0 7868800 4702200 3166600 18961 1401 7148 7316 29666 29666 KNGPLEVAGAAVSAGHGLPAK 21 2 0 Unmodified _KNGPLEVAGAAVSAGHGLPAK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.0366 3 648.693563 1943.05886 74504.6 0.59419 0.00038544 -0.080066 -5.1938E-05 0.51412 0.00033351 648.69364736222 654.03637562309 77.303 0.86946 77.303 76.979 77.849 0 402 56 10 0 0 0 5.5633E-08 2 40586 61.537 61.537 1 1.1699 0.99562 0 37160000 16705000 20455000 18962 1401 7148 7316 29667;29668 29668 KNGPLEVAGAAVSAGHGLPAK 21 2 0 Unmodified _KNGPLEVAGAAVSAGHGLPAK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.7723 4 486.771991 1943.05886 86168.57 0.26456 0.00012878 0.26786 0.00013039 0.53242 0.00025917 486.772343428212 490.779082325308 77.361 0.58657 77.361 77.037 77.623 7.6294E-06 200 38 7 0 0 0 0.0096614 2 40532 21.129 21.129 1 0.76673 0.65698 0 4172100 2237100 1934900 18963 1401 7148 7316 29669;29670 29669 KNPASLPLTQAALK 14 2 0 Unmodified _KNPASLPLTQAALK_ 0 0 1 Q13428;Q59FZ2 Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.967 3 484.624198 1450.85076 87278.66 0.29208 0.00014155 -0.2033 -9.8525E-05 0.088781 4.3025E-05 484.624043340805 489.966830998947 77.518 0.49463 77.518 77.295 77.79 0 156 32 7 0 0 0 0.016045 1 40696 16.529 14.167 1 1.676 1.4458 0 3085900 1125100 1960700 18964 1712 7149 7317 29671 29671 KNPPSGDLLNVYELFEK 17 2 0 Unmodified _KNPPSGDLLNVYELFEK_ 0 0 1 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.6878 3 655.010557 1962.00984 76461.29 0.97581 0.00063916 0.38934 0.00025502 1.3651 0.00089419 655.344569918249 660.687337902235 128.96 0.43875 128.96 128.74 129.18 0 57 20 6 0 0 0 0.0053708 1 78021 16.487 12.519 1 1.031 0.91877 0 1628000 930260 697790 18965 1822 7150 7318 29672 29672 KNPSSPLYTTLGVITK 16 2 0 Unmodified _KNPSSPLYTTLGVITK_ 0 0 1 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.0043 3 573.661089 1717.96144 82056.78 0.87101 0.00049966 0.61542 0.00035304 1.4864 0.00085271 573.661625942809 579.003782717644 92.191 0.54051 92.191 91.855 92.395 -7.6294E-06 124 46 4 0 0 0 0.00063481 2 56988 40.493 36.773 1 0.93768 1.07 0 12667000 7056200 5611100 18966 1427 7151 7319 29673;29674 29673 KNPSSPLYTTLGVITK 16 2 0 Unmodified _KNPSSPLYTTLGVITK_ 0 0 1 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.0047 3 573.661089 1717.96144 79541.09 0.55721 0.00031965 0.29183 0.00016741 0.84904 0.00048706 573.995577982593 579.00406710167 105.99 0.59428 105.99 105.73 106.32 0 164 28 8 0 0 0 8.1399E-05 2 60459 54.073 54.073 1 1.2174 1.0403 0 13067000 5658900 7407800 18967 1427 7151 7319 29675;29676 29676 KNPSSPLYTTLGVITK 16 2 0 Unmodified _KNPSSPLYTTLGVITK_ 0 0 1 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.9964 3 573.661089 1717.96144 80272.24 0.50214 0.00028806 0.034214 1.9627E-05 0.53636 0.00030769 573.661167461838 579.003886482503 105.63 0.59066 105.63 105.29 105.88 0 219 41 8 0 0 0 0.014705 2 59314 18.58 18.58 1 1.2263 1.0351 0 7532100 3271900 4260200 18968 1427 7151 7319 29677;29678 29677 KNPSSPLYTTLGVITK 16 2 0 Unmodified _KNPSSPLYTTLGVITK_ 0 0 1 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 860.4911 2 859.987995 1717.96144 65149.64 0.47202 0.00040593 -0.73438 -0.00063156 -0.26236 -0.00022563 860.489788557856 868.000796840706 105.6 0.63906 105.6 105.38 106.02 0 168 43 6 0 0 0 0.045634 1 59335 25.141 25.141 1 1.5107 1.2869 0 5265900 1918300 3347600 18969 1427 7151 7319 29679 29679 KNQALNIAWQK 11 2 0 Unmodified _KNQALNIAWQK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.3847 2 657.369861 1312.72517 77186.7 0.63069 0.00041459 -0.0044186 -2.9046E-06 0.62627 0.00041169 657.369681761385 665.384169333403 58.275 0.50797 58.275 57.995 58.503 0 166 39 6 0 0 0 0.0070464 1 29586 58.433 58.433 1 1.9749 1.7314 0 2846800 1210200 1636700 18970 69 7152 7320 29680 29680 KNQALNIAWQK 11 2 0 Unmodified _KNQALNIAWQK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.8195 2 657.369861 1312.72517 78186.66 0.53421 0.00035117 -0.077003 -5.0619E-05 0.45721 0.00030055 657.36976325939 665.384084973123 58.365 0.6209 58.365 58.092 58.713 -3.8147E-06 191 47 6 0 0 0 0.041192 1 29050 43.442 43.442 1 1.9341 1.6928 0 2221500 668070 1553400 18971 69 7152 7320 29681 29681 KNYEDEDSLK 10 2 0 Unmodified _KNYEDEDSLK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.7883 2 620.788232 1239.56191 75837.75 0.17839 0.00011074 0.55377 0.00034377 0.73216 0.00045452 620.788367802645 628.802973367444 22.058 0.47146 22.058 21.889 22.361 1.9073E-06 100 17 8 0 0 0 0.0011267 1 6891 83.081 53.932 1 1.4297 1.2197 0 18039000 9183300 8856000 18972 1471 7153 7321 29682 29682 KPAEEGNDSEEVPEASGPQNDGK 23 2 0 Unmodified _KPAEEGNDSEEVPEASGPQNDGK_ 0 0 1 Q8IZH0;Q8IZG9;Q8IZG8;Q8IZG7;Q8IZG6;Q8IZG5;Q8WWZ9;Q9Y444;Q9NZK4;O75101;R9QTR3;A4PIW0;A4PIV9;Q16385 Q8IZH0 Q8IZH0 SS18/SSX2 fusion;SSX2;SSX-HSTT;SYT-SSX2 Protein SSX2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.0314 3 795.354328 2383.04116 69446.32 0.21972 0.00017476 0.36769 0.00029244 0.58741 0.0004672 796.023003779759 801.031688302678 23.892 0.23811 23.892 23.748 23.987 0 31 8 6 0 0 0 0.0010421 1 9720 25.823 25.823 1 1.7637 2.0182 0 5806400 1574800 4231500 18973 673 7154 7322 29683 29683 KPALQSSVVATSK 13 2 0 Unmodified _KPALQSSVVATSK_ 0 0 1 Q9H307;A8K964 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.397 2 658.382634 1314.75072 74166.26 0.43417 0.00028585 -0.92084 -0.00060627 -0.48667 -0.00032042 658.381376766009 666.396129822307 27.106 0.45018 27.106 26.806 27.256 0 81 24 5 0 0 0 4.3588E-13 2 12369 126.83 126.83 1 1.3375 1.5972 0 19298000 8741600 10557000 18974 2028 7155 7323 29684;29685 29685 KPALQSSVVATSK 13 2 0 Unmodified _KPALQSSVVATSK_ 0 0 1 Q9H307;A8K964 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.3833 2 658.382634 1314.75072 74749.75 0.68049 0.00044803 0.084048 5.5335E-05 0.76454 0.00050336 658.382642883328 666.396965742385 26.499 0.28592 26.499 26.321 26.607 0 77 16 6 0 0 0 2.4003E-18 2 11854 138.24 138.24 1 1.4042 1.6256 0 48336000 19793000 28543000 18975 2028 7155 7323 29686;29687 29686 KPALVSTVEGGQDPK 15 2 0 Unmodified _KPALVSTVEGGQDPK_ 0 0 1 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.4153 2 763.414662 1524.81477 70513.2 0.70504 0.00053824 0.33062 0.0002524 1.0357 0.00079064 763.414765445395 771.429081433615 36.479 0.33011 36.479 36.303 36.633 0 136 30 6 0 0 0 9.03E-06 2 18416 96.464 96.464 1 1.089 1.2863 0 33291000 14698000 18592000 18976 1741 7156 7324 29688;29689 29689 KPALVSTVEGGQDPK 15 2 0 Unmodified _KPALVSTVEGGQDPK_ 0 0 1 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.6225 3 509.278867 1524.81477 83947.73 0.49749 0.00025336 0.12675 6.455E-05 0.62424 0.00031791 509.6132005111 514.621627304035 36.501 0.47569 36.501 36.245 36.72 0 232 44 8 0 0 0 5.6618E-05 1 18494 72.898 72.898 1 1.2817 1.5129 0 72983000 29586000 43397000 18977 1741 7156 7324 29690 29690 KPALVSTVEGGQDPK 15 2 0 Unmodified _KPALVSTVEGGQDPK_ 0 0 1 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.4141 2 763.414662 1524.81477 70042.96 0.81407 0.00062147 0.24032 0.00018347 1.0544 0.00080494 763.414631904163 771.429127157784 35.032 0.33762 35.032 34.859 35.197 0 123 28 6 0 0 0 4.1001E-07 2 17753 107.69 107.69 1 1.1492 1.3304 0 48682000 23432000 25249000 18978 1741 7156 7324 29691;29692 29691 KPALVSTVEGGQDPK 15 2 0 Unmodified _KPALVSTVEGGQDPK_ 0 0 1 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.6133 3 509.278867 1524.81477 84363.34 0.32674 0.0001664 0.23275 0.00011854 0.55949 0.00028494 509.279435656584 514.62155779286 41.465 0.6518 41.465 41.203 41.855 0 263 51 8 0 0 0 3.4265E-05 2 19247 80.102 80.102 1 1.43 1.2211 0 15003000 6530500 8472600 18979 1741 7156 7324 29693;29694 29694 KPALVSTVEGGQDPK 15 2 0 Unmodified _KPALVSTVEGGQDPK_ 0 0 1 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.429 2 763.414662 1524.81477 70398.38 0.51749 0.00039506 -0.082733 -6.316E-05 0.43476 0.0003319 763.414742603591 771.428962632011 41.487 0.43819 41.487 41.244 41.682 0 167 35 6 0 0 0 0.047646 1 19248 40.767 40.767 1 1.3245 1.1438 0 4724000 1882700 2841300 18980 1741 7156 7324 29695 29695 KPALVSTVEGGQDPK 15 2 0 Unmodified _KPALVSTVEGGQDPK_ 0 0 1 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 771.4301 2 763.414662 1524.81477 69759.84 0.44586 0.00034037 0.11604 8.8583E-05 0.56189 0.00042896 763.414708460303 771.42889942799 41.397 0.43206 41.397 41.175 41.607 -3.8147E-06 164 32 7 0 0 0 0.0021384 1 18690 63.091 63.091 1 1.4981 1.2803 0 4650000 2013400 2636700 18981 1741 7156 7324 29696 29696 KPAPPPAPPQATK 13 2 0 Unmodified _KPAPPPAPPQATK_ 0 0 1 E7ERS3;B4DTK7;Q86VM9;H3BRN6 E7ERS3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.3892 2 650.374612 1298.73467 76983.05 0.52334 0.00034037 0.063054 4.1009E-05 0.5864 0.00038138 650.374541998756 658.388854745648 20.584 0.35144 20.584 20.411 20.763 0 54 15 5 0 0 0 0.00020188 2 6975 77.062 77.062 1 0.79207 0.93078 0 13851000 7254300 6596500 18982 1033 7157 7325 29697;29698 29698 KPAPPPAPPQATK 13 2 0 Unmodified _KPAPPPAPPQATK_ 0 0 1 E7ERS3;B4DTK7;Q86VM9;H3BRN6 E7ERS3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.3887 2 650.374612 1298.73467 75473.27 0.74101 0.00048194 -0.13014 -8.4638E-05 0.61088 0.0003973 650.374462051995 658.38870144586 20.428 0.2968 20.428 20.302 20.599 1.9073E-06 37 9 5 0 0 0 0.00017418 2 6708 92.247 78.655 1 0.8835 1.0069 0 10412000 5013000 5399400 18983 1033 7157 7325 29699;29700 29699 KPASGPGAVVRPPK 14 2 1 Unmodified _KPASGPGAVVRPPK_ 0 0 2 Q9GZR2;A0A0C4DG31 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.5982 3 454.273499 1359.79867 92444.46 0.28854 0.00013108 0.07851 3.5665E-05 0.36705 0.00016674 454.273511283766 462.952446270076 22.793 0.58392 22.793 22.496 23.08 0 151 34 7 0 0 0 0.01724 1 8721 44.44 41.118 1 0.75722 0.90382 0 11562000 6823900 4738400 18984 2021 7158 7326 29701 29701 KPASGPGAVVRPPK 14 2 1 Unmodified _KPASGPGAVVRPPK_ 0 0 2 Q9GZR2;A0A0C4DG31 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.6076 3 454.273499 1359.79867 NaN NaN NaN -0.56409 -0.00025625 NaN NaN NaN NaN 21.635 0.50264 21.635 21.322 21.825 0 0 0 0 0.030919 1 7692 36.345 31.246 1 NaN NaN 0 7911500 7911500 0 18985 2021 7158 7326 29702 29702 KPATPAEDDEDDDIDLFGSDNEEEDK 26 2 0 Unmodified _KPATPAEDDEDDDIDLFGSDNEEEDK_ 0 0 1 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;Q9BW34;A0A087X1X7;Q71RH4;Q9H7G6;E9PQ49;E9PI39;E9PQZ1;H0YE72;E9PL71 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 975.7488 3 970.403742 2908.1894 NaN NaN NaN 0.6063 0.00058835 NaN NaN NaN NaN 79.976 0.33172 79.976 79.849 80.181 0 0 0 0 0.0012206 2 47443 34.125 31.617 1 NaN NaN 0 7574800 0 7574800 18986 875 7159 7327 29703;29704 29704 KPATPAEDDEDDDIDLFGSDNEEEDK 26 2 0 Unmodified _KPATPAEDDEDDDIDLFGSDNEEEDK_ 0 0 1 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;Q9BW34;A0A087X1X7;Q71RH4;Q9H7G6;E9PQ49;E9PI39;E9PQZ1;H0YE72;E9PL71 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 976.4131 3 970.403742 2908.1894 NaN NaN NaN -0.0044439 -4.3124E-06 NaN NaN NaN NaN 78.986 0.43714 78.986 78.857 79.294 0 0 0 0 5.625E-07 2 47930 53.705 46.83 1 NaN NaN 0 4841500 0 4841500 18987 875 7159 7327 29705;29706 29706 KPATSYVR 8 1 1 Unmodified _KPATSYVR_ 0 0 1 P46779;H0YKD8 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.2606 2 461.261259 920.507966 86763.34 -0.041345 -1.9071E-05 -0.45641 -0.00021053 -0.49776 -0.0002296 461.261116353983 470.27222442815 17.382 0.60302 17.382 17.266 17.869 0 124 21 9 0 0 0 0.00011151 2 4535 137.42 96.197 1 0.86794 1.056 0 507750000 267970000 239780000 18988 1572 7160 7328 29707;29708 29707 KPEEEEEEELEETAQEK 17 2 0 Unmodified _KPEEEEEEELEETAQEK_ 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.6427 3 692.642816 2074.90662 72733.35 0.69475 0.00048121 0.10254 7.1022E-05 0.79728 0.00055223 692.642845337951 697.985688972446 44.837 0.72601 44.837 44.503 45.229 0 442 65 10 0 0 0 6.0447E-36 3 24020 162.61 160.28 1 0.80202 0.94635 0 153300000 87435000 65863000 18989 1389 7161 7329 29709;29710;29711 29710 KPEEEEEEELEETAQEK 17 2 0 Unmodified _KPEEEEEEELEETAQEK_ 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1046.9773 2 1038.46059 2074.90662 60396.91 0.48766 0.00050641 0.19077 0.00019811 0.67843 0.00070452 1038.46073579379 1046.97649476538 44.866 0.53724 44.866 44.59 45.127 0 238 48 7 0 0 0 8.7305E-10 2 23997 128.76 128.76 1 0.88567 1.0454 0 75317000 41498000 33819000 18990 1389 7161 7329 29712;29713 29713 KPEEEEEEELEETAQEK 17 2 0 Unmodified _KPEEEEEEELEETAQEK_ 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1038.9624 2 1038.46059 2074.90662 60152.04 0.62457 0.00064859 -0.074142 -7.6993E-05 0.55043 0.0005716 1038.96193557222 1046.47452785233 43.6 0.41932 43.6 43.383 43.802 0 221 31 9 0 0 0 1.1096E-44 2 23573 174.62 166.75 1 0.76806 0.89131 0 88951000 49933000 39018000 18991 1389 7161 7329 29714;29715 29714 KPEEEEEEELEETAQEK 17 2 0 Unmodified _KPEEEEEEELEETAQEK_ 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.9777 3 692.642816 2074.90662 73400.96 0.88726 0.00061456 -0.20452 -0.00014166 0.68274 0.00047289 692.976971332617 697.985475177214 43.594 0.56767 43.594 43.339 43.907 0 351 43 11 0 0 0 1.2913E-25 2 23593 139.5 139.5 1 0.82943 0.96624 0 234080000 129090000 104990000 18992 1389 7161 7329 29716;29717 29716 KPEEEEEEELEETAQEK 17 2 0 Unmodified _KPEEEEEEELEETAQEK_ 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.9763 3 692.642816 2074.90662 72681.85 0.4659 0.0003227 0.14793 0.00010246 0.61382 0.00042516 692.977189035072 697.98562646087 53.478 0.81371 53.478 53.147 53.961 -3.8147E-06 401 60 12 0 0 0 4.7227E-05 2 26436 50.883 50.883 1 1.0175 0.86248 0 61759000 31706000 30053000 18993 1389 7161 7329 29718;29719 29719 KPEEEEEEELEETAQEK 17 2 0 Unmodified _KPEEEEEEELEETAQEK_ 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1046.474 2 1038.46059 2074.90662 59760.08 0.285 0.00029596 0.074776 7.7652E-05 0.35977 0.00037361 1038.96218548014 1046.474693006 53.5 0.512 53.5 53.187 53.699 0 276 36 10 0 0 0 0.001981 1 26483 46.926 46.639 1 1.0255 0.87504 0 17254000 8914900 8338900 18994 1389 7161 7329 29720 29720 KPEEEEEEELEETAQEK 17 2 0 Unmodified _KPEEEEEEELEETAQEK_ 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.3199 3 692.642816 2074.90662 72656.37 0.3878 0.00026861 0.21378 0.00014807 0.60158 0.00041668 692.977268875721 697.985714386208 54.049 0.81196 54.049 53.737 54.549 0 452 58 12 0 0 0 2.3677E-07 2 26281 91.475 90.424 1 1.0053 0.85679 0 47526000 23650000 23876000 18995 1389 7161 7329 29721;29722 29722 KPESEGYLQEEK 12 2 0 Unmodified _KPESEGYLQEEK_ 0 0 1 H0Y432;Q53EZ4 H0Y432 H0Y432 CEP55 Centrosomal protein of 55 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.8652 2 718.848821 1435.68309 74884.91 0.78436 0.00056384 0.8588 0.00061734 1.6432 0.0011812 718.849212110487 726.863567440793 22.871 0.19764 22.871 22.748 22.946 0 24 9 4 0 0 0 1.25E-05 1 8833 109.24 81.223 1 2.1135 2.3901 0 7101600 2135400 4966100 18996 1280 7162 7330 29723 29723 KPFGAILNLVPLAESVVK 18 2 0 Unmodified _KPFGAILNLVPLAESVVK_ 0 0 1 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3;K7ES52;K7ERJ1 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.3846 3 632.383667 1894.12917 75864.85 1.0384 0.00065665 0.19172 0.00012124 1.2301 0.00077789 632.718097270926 637.72659948689 133.17 0.21669 133.17 133.04 133.26 0 43 6 12 0 0 0 6.5396E-07 2 87130 70.783 65.143 1 1.9648 2.3189 0 90186000 31208000 58977000 18997 252 7163 7331 29724;29725 29724 KPFGAILNLVPLAESVVK 18 2 0 Unmodified _KPFGAILNLVPLAESVVK_ 0 0 1 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3;K7ES52;K7ERJ1 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.5897 2 948.071862 1894.12917 63252.44 1.0667 0.0010113 0.4975 0.00047166 1.5642 0.0014829 948.573288962861 956.086459628861 133.17 0.15594 133.17 133.07 133.22 0 20 4 8 0 0 0 1.6908E-11 1 87132 105 91.339 1 2.4255 2.8847 0 23644000 8375500 15269000 18998 252 7163 7331 29726 29726 KPFGAILNLVPLAESVVK 18 2 0 Unmodified _KPFGAILNLVPLAESVVK_ 0 0 1 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3;K7ES52;K7ERJ1 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.7187 3 632.383667 1894.12917 75769.15 0.78238 0.00049476 0.23702 0.00014989 1.0194 0.00064465 632.718136329575 637.72658450817 133.14 0.23828 133.14 133.03 133.26 -1.5259E-05 49 7 11 0 0 0 2.7795E-12 2 89309 86.488 80.848 1 1.9222 2.2364 0 171390000 58232000 113160000 18999 252 7163 7331 29727;29728 29728 KPFGAILNLVPLAESVVK 18 2 0 Unmodified _KPFGAILNLVPLAESVVK_ 0 0 1 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3;K7ES52;K7ERJ1 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.0869 2 948.071862 1894.12917 63334.74 0.72699 0.00068924 0.13629 0.00012921 0.86328 0.00081845 948.573312377523 956.086176023825 133.13 0.17442 133.13 133.05 133.23 0 31 5 8 0 0 0 2.0395E-63 2 89315 177.88 163.32 1 2.0195 2.329 0 28879000 9864700 19015000 19000 252 7163 7331 29729;29730 29729 KPFPLVK 7 2 0 Unmodified _KPFPLVK_ 0 0 1 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.7847 2 414.770732 827.52691 NaN NaN NaN -0.14651 -6.077E-05 NaN NaN NaN NaN 39.164 0.69769 39.164 38.92 39.618 0 0 0 0 0.051185 1 20185 58.194 34.222 1 NaN NaN 0 80930000 0 80930000 19001 2103 7164 7332 29731 29731 KPFPLVKPLPGEEPLFTIPHTQEAFR 26 2 1 Unmodified _KPFPLVKPLPGEEPLFTIPHTQEAFR_ 0 0 2 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.4236 4 747.914101 2987.6273 NaN NaN NaN -0.10089 -7.5459E-05 NaN NaN NaN NaN 119.52 0.45024 119.52 119.32 119.77 -7.6294E-06 0 0 0 6.5457E-10 1 69901 63.138 57.786 1 NaN NaN 0 10442000 0 10442000 19002 2103 7165 7333 29732 29732 KPFSQHVR 8 1 1 Unmodified _KPFSQHVR_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 333.5225 3 333.522526 997.545748 102528.6 -0.35456 -0.00011825 0.15418 5.1421E-05 -0.20038 -6.6832E-05 333.52251147561 339.53003476779 15.135 0.63493 15.135 15.057 15.692 0 70 31 4 0 0 0 0.00059202 2 2835 92.439 75.663 1 0.94371 1.1032 0 50063000 21507000 28557000 19003 342 7166 7334 29733;29734 29733 KPGDLSDELR 10 1 1 Unmodified _KPGDLSDELR_ 0 0 1 Q13435;Q7Z3K9;E9PPJ0;H0YEX5 Q13435 Q13435 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.2966 2 565.296027 1128.5775 78856.18 0.52269 0.00029547 0.063441 3.5863E-05 0.58613 0.00033134 565.296096091295 574.306822551051 34.054 0.5041 34.054 33.819 34.323 0 99 37 4 0 0 0 0.0090979 1 17155 69.672 69.672 1 1.3313 1.5058 0 15833000 6627700 9205700 19004 1713 7167 7335 29735 29735 KPGGFDISLFYR 12 1 1 Unmodified _KPGGFDISLFYR_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.5849 3 467.250472 1398.72959 87998.64 0.2058 9.6161E-05 0.079735 3.7256E-05 0.28554 0.00013342 467.250441729621 473.25800230999 102.73 1.3467 102.73 102.05 103.39 0 590 112 8 0 0 0 5.3315E-05 4 63407 67.456 55.924 1 0.37884 0.45234 0 52102000 36279000 15824000 19005 82 7168 7336 29736;29737;29738;29739 29738 KPGGFDISLFYR 12 1 1 Unmodified _KPGGFDISLFYR_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.3846 2 700.372069 1398.72959 73120.34 0.5892 0.00041266 0.40546 0.00028397 0.99466 0.00069663 700.372479178673 709.383653613974 102.77 1.3711 102.77 101.91 103.28 0 523 115 6 0 0 0 0.0094977 1 63025 50.354 38.76 1 0.38421 0.45767 0 48453000 35336000 13117000 19006 82 7168 7336 29740 29740 KPGGFDISLFYR 12 1 1 Unmodified _KPGGFDISLFYR_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2504 3 467.250472 1398.72959 87615.59 0.29076 0.00013586 -0.0023121 -1.0803E-06 0.28844 0.00013478 467.250414213485 473.257990498731 101.14 1.3928 101.14 100.55 101.95 0 651 110 9 0 0 0 2.6497E-06 4 63880 89.356 77.824 1 0.37173 0.43954 0 169640000 121090000 48544000 19007 82 7168 7336 29741;29742;29743;29744 29743 KPGGFDISLFYR 12 1 1 Unmodified _KPGGFDISLFYR_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.3839 2 700.372069 1398.72959 71993.55 0.73697 0.00051615 -0.18563 -0.00013001 0.55135 0.00038615 700.372206868066 709.383533380154 101.15 1.3818 101.15 100.63 102.02 0 604 108 10 0 0 0 0.00031438 4 63588 90.653 90.653 1 0.35301 0.4167 0 130210000 99245000 30963000 19008 82 7168 7336 29745;29746;29747;29748 29746 KPGGFDISLFYR 12 1 1 Unmodified _KPGGFDISLFYR_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 467.5849 3 467.250472 1398.72959 88226.06 0.67505 0.00031542 -0.094582 -4.4194E-05 0.58046 0.00027122 467.25041859002 473.257890781205 113.31 0.79416 113.31 113.07 113.86 0 187 39 9 0 0 0 0.00014519 1 65949 56.951 50.253 1 0.30385 0.2658 0 25859000 19717000 6141700 19009 82 7168 7336 29749 29749 KPGGFDISLFYR 12 1 1 Unmodified _KPGGFDISLFYR_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.3842 2 700.372069 1398.72959 71237.16 0.9823 0.00068797 0.52206 0.00036563 1.5044 0.0010536 700.372185099954 709.383283329918 113.35 0.69852 113.35 113.04 113.74 0 196 34 9 0 0 0 0.0029903 2 65988 60.255 49.091 1 0.25952 0.22793 0 31583000 25304000 6278900 19010 82 7168 7336 29750;29751 29751 KPGGFDISLFYR 12 1 1 Unmodified _KPGGFDISLFYR_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.2581 3 467.250472 1398.72959 88353.63 0.3463 0.00016181 0.044242 2.0672E-05 0.39054 0.00018248 467.250479436859 473.257943989689 113.03 0.61645 113.03 112.83 113.44 -7.6294E-06 172 30 8 0 0 0 5.3315E-05 2 64845 67.456 59.152 1 0.29837 0.25331 0 22821000 17788000 5032500 19011 82 7168 7336 29752;29753 29753 KPGSVVAAAAAEAK 14 2 0 Unmodified _KPGSVVAAAAAEAK_ 0 0 1 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;A0A075BPP5 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3605 2 635.361702 1268.70885 NaN NaN NaN -0.20266 -0.00012876 NaN NaN NaN NaN 32.03 0.27929 32.03 31.84 32.119 0 0 0 0 0.0017695 1 15877 76.728 49.839 1 NaN NaN 0 5197100 5197100 0 19012 623 7169 7337 29754 29754 KPGSVVAAAAAEAK 14 2 0 Unmodified _KPGSVVAAAAAEAK_ 0 0 1 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;A0A075BPP5 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.3772 2 635.361702 1268.70885 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.969 1 31.969 31.469 32.469 0 0 0 0 0.0026917 1 15893 79.089 52.646 1 19013 623 7169 7337 29755 29755 KPIDFVLNK 9 2 0 Unmodified _KPIDFVLNK_ 0 0 1 Q2TB10;B7Z4V7 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.3359 2 537.321317 1072.62808 83603.09 0.71031 0.00038167 -0.12627 -6.785E-05 0.58404 0.00031382 537.321144323277 545.335262597155 58.322 0.25482 58.322 58.185 58.44 0 52 15 5 0 0 0 1.3017E-05 2 33836 129.63 129.63 1 1.2795 1.4806 0 43428000 21117000 22311000 19014 1777 7170 7338 29756;29757 29756 KPIFDNFRPPPLTPEDVGFASGFSASGTAASAR 33 1 2 Unmodified _KPIFDNFRPPPLTPEDVGFASGFSASGTAASAR_ 0 0 2 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 853.1832 4 852.680927 3406.6946 64705.17 0.98606 0.00084079 -0.24157 -0.00020598 0.74449 0.00063481 852.931771875687 859.938623539564 126.26 0.72049 126.26 125.94 126.66 0 151 26 11 0 0 0 0.0055604 2 76064 22.773 20.69 1 2.6396 2.4662 0 11752000 3756400 7995400 19015 1680 7171 7339 29758;29759 29759 KPIPLENPK 9 2 0 Unmodified _KPIPLENPK_ 0 0 1 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.3273 2 518.313492 1034.61243 83347.84 0.48709 0.00025247 -0.032099 -1.6637E-05 0.455 0.00023583 518.313369569981 526.327637349919 26.182 0.43512 26.182 25.968 26.404 -1.9073E-06 113 22 7 0 0 0 0.0032952 2 11695 78.516 70.296 1 1.0945 1.2691 0 71898000 34629000 37269000 19016 780 7172 7340 29760;29761 29761 KPIPTWAR 8 1 1 Unmodified _KPIPTWAR_ 0 0 1 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.7874 2 484.787444 967.560336 86955.66 0.064414 3.1227E-05 0.29244 0.00014177 0.35685 0.000173 484.787522738607 493.798686288148 34.186 0.80483 34.186 33.804 34.609 0 314 70 6 0 0 0 0.021082 2 16976 67.277 67.277 1 0.92287 1.1114 0 104540000 53342000 51202000 19017 2059 7173 7341 29762;29763 29762 KPIPTWAR 8 1 1 Unmodified _KPIPTWAR_ 0 0 1 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7884 2 484.787444 967.560336 85670.81 0.5259 0.00025495 0.0066022 3.2007E-06 0.53251 0.00025815 484.787334313536 493.798591164649 32.522 0.69779 32.522 32.235 32.932 0 278 64 6 0 0 0 0.034971 1 16219 58.194 58.194 1 0.90365 1.0649 0 98820000 52492000 46328000 19018 2059 7173 7341 29764 29764 KPITEIQDSK 10 2 0 Unmodified _KPITEIQDSK_ 0 0 1 B4DLM8;O15381;B4DQJ4;A0JLP9;E9PH71;C9JP83;C9J6P7 B4DLM8 B4DLM8 NVL Nuclear valosin-containing protein-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8373 2 579.821878 1157.6292 80216.39 0.49577 0.00028746 0.8905 0.00051633 1.3863 0.00080379 579.822587856328 587.836866720063 21.36 0.22154 21.36 21.243 21.464 0 25 9 4 0 0 0 0.005196 1 7527 66.056 47.449 1 1.3259 1.5153 0 6333200 2872500 3460700 19019 997 7174 7342 29765 29765 KPITTGGVTYR 11 1 1 Unmodified _KPITTGGVTYR_ 0 0 1 I0CE67;Q6I9R8;Q2XQU9;J3KNW4;A0A0A0MSG2;Q14192;Q53T40;Q2TSB7 I0CE67 I0CE67 FHL2;AAG11 Four and a half LIM domains protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.8511 2 596.837862 1191.66117 79272.95 1.1639 0.00069467 0.29366 0.00017527 1.4576 0.00086994 596.837810789953 605.849184943924 25.497 0.21403 25.497 25.393 25.607 0 32 8 6 0 0 0 0.00045013 1 11127 89.827 73.945 1 2.3757 2.7552 0 35952000 9353600 26598000 19020 478 7175 7343 29766 29766 KPITTGGVTYR 11 1 1 Unmodified _KPITTGGVTYR_ 0 0 1 I0CE67;Q6I9R8;Q2XQU9;J3KNW4;A0A0A0MSG2;Q14192;Q53T40;Q2TSB7 I0CE67 I0CE67 FHL2;AAG11 Four and a half LIM domains protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.8828 3 398.227667 1191.66117 93756.3 0.69002 0.00027478 -0.26251 -0.00010454 0.42751 0.00017025 398.227726148499 404.234835366394 25.497 0.30245 25.497 25.304 25.607 0 41 12 6 0 0 0 0.037399 1 11108 27.357 20.916 1 1.9254 2.2294 0 33819000 13837000 19981000 19021 478 7175 7343 29767 29767 KPLFHGDSEIDQLFR 15 1 1 Unmodified _KPLFHGDSEIDQLFR_ 0 0 1 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.3135 3 601.312571 1800.91588 82040.02 0.46858 0.00028176 0.36338 0.00021851 0.83196 0.00050027 601.647045610235 607.654621716835 102.2 0.64539 102.2 101.8 102.45 0 128 47 4 0 0 0 0.0081012 1 57899 26.49 26.49 1 1.0047 0.83059 0 4020000 1994900 2025100 19022 25 7176 7344 29768 29768 KPLLESGTLGTK 12 2 0 Unmodified _KPLLESGTLGTK_ 0 0 1 A0A024R1A3;P22314;B4DDE4;B4DL67 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.3669 2 622.366453 1242.71835 78185.84 0.69465 0.00043232 -0.19391 -0.00012068 0.50074 0.00031164 622.366503457454 630.380414209369 41.779 0.28712 41.779 41.619 41.906 0 88 22 6 0 0 0 0.01343 1 22067 48.115 36.895 1 2.4221 2.8817 0 17451000 5432500 12018000 19023 74 7177 7345 29769 29769 KPLPDHVSIVEPK 13 2 0 Unmodified _KPLPDHVSIVEPK_ 0 0 1 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.2935 3 486.948681 1457.82421 85719.96 0.29401 0.00014317 -0.24245 -0.00011806 0.051562 2.5108E-05 486.948533646308 492.291338066451 49.742 1.085 49.742 49.268 50.353 0 523 84 10 0 0 0 3.0367E-19 2 27150 117.08 109.3 1 1.1168 1.3172 0 376680000 177740000 198940000 19024 1511 7178 7346 29770;29771 29770 KPLPDHVSIVEPK 13 2 0 Unmodified _KPLPDHVSIVEPK_ 0 0 1 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2921 3 486.948681 1457.82421 85533.63 0.46888 0.00022832 -0.026407 -1.2859E-05 0.44247 0.00021546 486.948610296237 492.291437294017 46.603 1.0193 46.603 46.173 47.193 3.8147E-06 528 84 9 0 0 0 2.4452E-05 2 25573 97.223 93.587 1 1.1448 1.3371 0 456460000 225890000 230570000 19025 1511 7178 7346 29772;29773 29772 KPLPDHVSIVEPK 13 2 0 Unmodified _KPLPDHVSIVEPK_ 0 0 1 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.9486 3 486.948681 1457.82421 86678.01 0.24196 0.00011782 0.02308 1.1239E-05 0.26504 0.00012906 486.948637346567 492.291463069069 55.651 1.3036 55.651 55.084 56.388 3.8147E-06 444 85 9 0 0 0 0.0033535 2 27780 38.357 33.652 1 1.1146 0.95006 0 21053000 9858100 11195000 19026 1511 7178 7346 29774;29775 29775 KPLPDHVSIVEPK 13 2 0 Unmodified _KPLPDHVSIVEPK_ 0 0 1 P23396;Q53G83;E9PL09;E9PPU1;H0YEU2;Q9NQS8;E9PSF4 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.2914 3 486.948681 1457.82421 85840.51 0.19142 9.3213E-05 -0.15209 -7.406E-05 0.039333 1.9153E-05 486.94852889947 492.291392075415 55.595 1.1155 55.595 55.134 56.25 0 393 69 9 0 0 0 5.2059E-07 2 27163 91.812 87.265 1 1.0823 0.91722 0 18333000 8223100 10109000 19027 1511 7178 7346 29776;29777 29776 KPLTPYFR 8 1 1 Unmodified _KPLTPYFR_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.2949 2 511.295102 1020.57565 84250.72 0.57814 0.0002956 0.14081 7.1996E-05 0.71895 0.0003676 511.295064412964 520.306338540456 46.501 1.2476 46.501 45.704 46.951 0 382 110 6 0 0 0 0.028019 1 25037 67.981 67.981 1 0.57079 0.68781 0 114600000 70773000 43831000 19028 1244 7179 7347 29778 29778 KPLTPYFR 8 1 1 Unmodified _KPLTPYFR_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 347.207 3 341.19916 1020.57565 104315.3 0.11995 4.0926E-05 0.14626 4.9905E-05 0.26621 9.0831E-05 341.199140214738 347.206582053322 46.522 0.68943 46.522 46.084 46.774 0 211 59 5 0 0 0 0.0049314 2 25118 58.815 58.815 1 0.57764 0.64801 0 21489000 12520000 8969400 19029 1244 7179 7347 29779;29780 29780 KPLTPYFR 8 1 1 Unmodified _KPLTPYFR_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.3058 2 511.295102 1020.57565 NaN NaN NaN -0.3848 -0.00019674 NaN NaN NaN NaN 45.941 0.42006 45.941 45.635 46.055 -3.8147E-06 0 0 0 0.043535 1 24818 52.786 38.79 1 NaN NaN 0 10263000 0 10263000 19030 1244 7179 7347 29781 29781 KPLTPYFR 8 1 1 Unmodified _KPLTPYFR_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.2955 2 511.295102 1020.57565 85930.11 1.0711 0.00054764 -0.45211 -0.00023116 0.61898 0.00031648 511.294872652384 520.305985833265 43.701 0.57674 43.701 43.553 44.13 0 220 47 8 0 0 0 4.797E-05 2 23760 153.04 153.04 1 0.6547 0.7785 0 415890000 249630000 166260000 19031 1244 7179 7347 29782;29783 29783 KPLTPYFR 8 1 1 Unmodified _KPLTPYFR_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 341.1993 3 341.19916 1020.57565 102772.6 0.6935 0.00023662 -0.46926 -0.00016011 0.22425 7.6512E-05 341.198890147356 347.206418623079 43.707 0.59844 43.707 43.565 44.164 0 112 49 5 0 0 0 0.0032854 2 23773 66.073 66.073 1 0.68706 0.80895 0 86356000 51348000 35008000 19032 1244 7179 7347 29784;29785 29785 KPLTPYFR 8 1 1 Unmodified _KPLTPYFR_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 347.2065 3 341.19916 1020.57565 102505.5 -0.34701 -0.0001184 0.13002 4.4364E-05 -0.21698 -7.4035E-05 341.199209209795 347.206620113655 51.675 0.47359 51.675 51.492 51.965 0 142 38 6 0 0 0 0.014264 1 25491 35.438 35.438 1 1.2438 1.0263 0 5348700 2463700 2885000 19033 1244 7179 7347 29786 29786 KPLTPYFR 8 1 1 Unmodified _KPLTPYFR_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 347.2065 3 341.19916 1020.57565 103630.6 -0.25725 -8.7774E-05 0.10164 3.4679E-05 -0.15561 -5.3096E-05 341.199153584851 347.206586015965 51.657 0.70528 51.657 51.322 52.027 0 202 49 6 0 0 0 0.035019 1 24879 21.697 21.697 1 1.2662 1.0822 0 2831500 1143000 1688600 19034 1244 7179 7347 29787 29787 KPLTSNCTIQIATPGK 16 2 0 Unmodified _KPLTSNCTIQIATPGK_ 0 0 1 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.3262 3 576.981945 1727.924 78936.83 0.60933 0.00035157 0.054953 3.1707E-05 0.66428 0.00038328 576.981829890066 582.324754263591 55.367 0.80855 55.367 54.97 55.778 0 343 72 7 0 0 0 6.6631E-05 2 31057 56.817 56.817 1 0.7935 0.9367 0 64831000 35171000 29660000 19035 1752 7180 7348 29788;29789 29789 KPLTSNCTIQIATPGK 16 2 0 Unmodified _KPLTSNCTIQIATPGK_ 0 0 1 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.9867 2 864.969279 1727.924 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.269 1 55.269 54.769 55.769 -3.8147E-06 0 0 0 0.0033982 1 31063 69.456 51.188 1 19036 1752 7180 7348 29790 29790 KPLTSNCTIQIATPGK 16 2 0 Unmodified _KPLTSNCTIQIATPGK_ 0 0 1 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.6592 3 576.981945 1727.924 79296.63 0.55105 0.00031795 -0.37229 -0.00021481 0.17876 0.00010314 576.981643782045 582.324552707568 54.006 0.64106 54.006 53.718 54.36 0 361 59 8 0 0 0 3.8549E-05 2 30731 75.018 75.018 1 0.79723 0.92365 0 58978000 34009000 24969000 19037 1752 7180 7348 29791;29792 29792 KPLTSNCTIQIATPGK 16 2 0 Unmodified _KPLTSNCTIQIATPGK_ 0 0 1 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.9852 2 864.969279 1727.924 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.004 1 54.004 53.504 54.504 0 0 0 0 0.011065 1 30862 54.023 42.44 1 19038 1752 7180 7348 29793 29793 KPLTSNCTIQIATPGK 16 2 0 Unmodified _KPLTSNCTIQIATPGK_ 0 0 1 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.9819 3 576.981945 1727.924 78654.57 0.44829 0.00025866 -0.21387 -0.0001234 0.23441 0.00013525 577.316108315515 582.324670777892 64.662 0.65829 64.662 64.333 64.991 0 296 45 9 0 0 0 0.00015965 2 33229 48.623 48.623 1 1.2149 1.0371 0 15981000 7316600 8664100 19039 1752 7180 7348 29794;29795 29795 KPLTSNCTIQIATPGK 16 2 0 Unmodified _KPLTSNCTIQIATPGK_ 0 0 1 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.6594 3 576.981945 1727.924 77517.59 0.23526 0.00013574 -0.058766 -3.3907E-05 0.17649 0.00010183 577.316168244064 582.32476669441 64.996 0.66481 64.996 64.689 65.354 -7.6294E-06 326 50 9 0 0 0 0.0010801 2 32693 36.451 31.821 1 1.2036 1.0188 0 14786000 6246900 8539100 19040 1752 7180 7348 29796;29797 29796 KPLTSSSAAPQRPISTQR 18 1 2 Unmodified _KPLTSSSAAPQRPISTQR_ 0 0 2 B4DM33;Q15691;A2VCR0 B4DM33 B4DM33 MAPRE1 Microtubule-associated protein RP/EB family member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.7007 3 642.356951 1924.04902 76786.67 0.28984 0.00018618 0.047433 3.0469E-05 0.33727 0.00021665 642.691142551643 651.700543618281 23.194 0.23592 23.194 23.08 23.316 0 33 10 5 0 0 0 0.011976 1 9170 27.324 27.324 1 2.5094 2.7096 0 8415900 2070800 6345100 19041 1001 7181 7349 29798 29798 KPLTVLNK 8 2 0 Unmodified _KPLTVLNK_ 0 0 1 P53350;B2R841;B4E083;Q59GD0;D3DWF3;I3L2H5 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.8115 2 456.797478 911.580402 88906.05 0.404 0.00018455 0.14849 6.7831E-05 0.5525 0.00025238 456.797408436823 464.811603329223 26.01 0.38541 26.01 25.745 26.131 1.9073E-06 97 24 7 0 0 0 1.232E-05 2 11514 147.36 60.496 1 0.94091 1.0905 0 65171000 33970000 31201000 19042 1604 7182 7350 29799;29800 29800 KPMESSSVVSCR 12 1 1 Oxidation (M) _KPM(ox)ESSSVVSCR_ KPM(1)ESSSVVSCR KPM(50.29)ESSSVVSCR 0 1 1 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.8234 2 691.823769 1381.63298 NaN NaN NaN NaN NaN NaN NaN NaN NaN 17.233 1 17.233 16.733 17.733 0 0 0 0 0.011248 1 4413 50.292 41.078 1 19043 1233 7183 7351 29801 29801 948 KPNAETTVASEIK 13 2 0 Unmodified _KPNAETTVASEIK_ 0 0 1 A8K273;B2RTX8;Q7Z5K2 A8K273 A8K273 WAPAL Wings apart-like protein homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3904 2 694.375006 1386.73546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.193 1 34.193 33.693 34.693 0 0 0 0 0.035885 1 17081 53.569 22.147 1 19044 708 7184 7352 29802 29802 KPNEGADGQWK 11 2 0 Unmodified _KPNEGADGQWK_ 0 0 1 Q63HR1;Q5VU21;D3DQ69;Q8NC51;D3DQ70 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.3133 2 615.299101 1228.58365 77653.13 0.29934 0.00018419 -0.036865 -2.2683E-05 0.26248 0.0001615 615.299337681381 623.313222785165 17.392 0.3926 17.392 17.143 17.535 0 46 12 6 0 0 0 1.0117E-07 1 4604 115.78 90.859 1 1.882 2.1686 0 9438500 3075100 6363400 19045 1832 7185 7353 29803 29803 KPNPVEEEPSR 11 1 1 Unmodified _KPNPVEEEPSR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.3365 2 641.325316 1280.63608 75211.02 0.53316 0.00034193 -0.53826 -0.0003452 -0.0051037 -3.2732E-06 641.825061501382 650.33652276652 17.749 0.29862 17.749 17.617 17.916 0 45 9 7 0 0 0 2.7985E-12 2 4826 143.24 121.79 1 1.5221 1.7494 0 27086000 8227700 18858000 19046 1569 7186 7354 29804;29805 29804 KPNPVEEEPSR 11 1 1 Unmodified _KPNPVEEEPSR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.886 3 427.88597 1280.63608 89009.73 -0.1909 -8.1684E-05 0.092195 3.9449E-05 -0.098707 -4.2235E-05 427.886000779667 433.893388058788 17.736 0.31825 17.736 17.617 17.936 0 38 10 6 0 0 0 1.5441E-10 2 4850 105.13 84.958 1 1.4401 1.6512 0 26472000 10242000 16231000 19047 1569 7186 7354 29806;29807 29806 KPNPVEEEPSR 11 1 1 Unmodified _KPNPVEEEPSR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.8933 3 427.88597 1280.63608 90307.91 -0.18126 -7.7559E-05 0.1469 6.2858E-05 -0.034359 -1.4702E-05 427.886007185999 433.893442504338 17.686 0.38614 17.686 17.557 17.943 0 57 15 6 0 0 0 1.9118E-10 2 4593 107.85 86.088 1 1.4721 1.7032 0 32843000 13635000 19208000 19048 1569 7186 7354 29808;29809 29809 KPNPVEEEPSR 11 1 1 Unmodified _KPNPVEEEPSR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.3367 2 641.325316 1280.63608 75011.09 0.57094 0.00036616 0.02707 1.7361E-05 0.59801 0.00038352 641.3254019909 650.336468001149 17.667 0.33133 17.667 17.557 17.888 0 69 12 8 0 0 0 4.0883E-12 1 4591 139.86 123.02 1 1.5736 1.8222 0 33883000 13227000 20656000 19049 1569 7186 7354 29810 29810 KPNPVEEEPSR 11 1 1 Unmodified _KPNPVEEEPSR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.3361 2 641.325316 1280.63608 76012.35 0.21566 0.00013831 -0.6749 -0.00043283 -0.45924 -0.00029452 641.824761689728 650.336609942757 18.849 0.28427 18.849 18.717 19.001 0 48 10 8 0 0 0 0.0021829 1 4736 68.536 57.384 1 1.5709 1.3022 0 5741600 1529000 4212600 19050 1569 7186 7354 29811 29811 KPPAPPSPVQSQSPSTNWSPAVPVK 25 2 0 Unmodified _KPPAPPSPVQSQSPSTNWSPAVPVK_ 0 0 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 861.79 3 861.790372 2582.34929 66342.96 0.5648 0.00048674 0.032371 2.7897E-05 0.59717 0.00051464 862.124532212834 867.802166027565 93.713 0.43192 93.713 93.521 93.953 0 112 29 7 0 0 0 0.048718 1 52382 8.3958 8.3958 1 0.58528 0.52071 0 2135100 1459000 676030 19051 570 7187 7355 29812 29812 KPPAPPSPVQSQSPSTNWSPAVPVK 25 2 0 Unmodified _KPPAPPSPVQSQSPSTNWSPAVPVK_ 0 0 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 867.471 3 861.790372 2582.34929 66334.94 0.43045 0.00037096 0.06609 5.6955E-05 0.49654 0.00042791 862.124222206154 867.468239029042 93.462 0.32698 93.462 93.321 93.648 0 68 19 6 0 0 0 0.063526 1 51392 5.2078 5.2078 1 0.56641 0.49087 0 2719500 1478900 1240600 19052 570 7187 7355 29813 29813 KPPARPSAAAAAIAVAAAEEER 22 1 2 Unmodified _KPPARPSAAAAAIAVAAAEEER_ 0 0 2 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.7351 3 716.390431 2146.14946 73201.04 0.64547 0.00046241 -0.36339 -0.00026033 0.28208 0.00020208 716.389783154504 725.733748307335 87.706 0.59532 87.706 87.413 88.008 0 158 36 6 0 0 0 8.1709E-05 1 48287 36.9 36.9 1 1.3332 1.2586 0 2407900 1113100 1294800 19053 876 7188 7356 29814 29814 KPPARPSAAAAAIAVAAAEEER 22 1 2 Unmodified _KPPARPSAAAAAIAVAAAEEER_ 0 0 2 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.5524 4 537.544643 2146.14946 81348.15 0.54681 0.00029394 -0.45924 -0.00024686 0.087573 4.7074E-05 537.794905338618 544.552256653212 87.625 0.93279 87.625 87.358 88.29 0 391 57 10 0 0 0 0.018976 1 48458 21.129 20.197 1 1.2395 1.1593 0 9873400 4421300 5452000 19054 876 7188 7356 29815 29815 KPPARPSAAAAAIAVAAAEEER 22 1 2 Unmodified _KPPARPSAAAAAIAVAAAEEER_ 0 0 2 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.7958 4 537.544643 2146.14946 82946.45 0.52023 0.00027965 -0.045654 -2.4541E-05 0.47457 0.00025511 537.795180548045 544.552418266948 87.287 0.82098 87.287 87.033 87.854 0 284 46 10 0 0 0 0.0025084 2 47133 25.15 25.15 1 1.2998 1.2918 0 10940000 4887100 6053100 19055 876 7188 7356 29816;29817 29816 KPPCCVLSNPDQK 13 2 0 Unmodified _KPPCCVLSNPDQK_ 0 0 1 B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4;S4R308;K7ESG9;K7EKH0;K7EJB0;Q7Z3K7;C9JWJ8;K7EN08;D2DXM9;B4DHW2;Q14938;K7EMQ5 B1AKN6 B1AKN6 NFIA;NFIX;DKFZp686I05275 Nuclear factor 1;Nuclear factor 1 A-type;Nuclear factor 1 X-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.2607 3 514.918287 1541.73303 87913.51 0.33267 0.0001713 0.069689 3.5884E-05 0.40236 0.00020718 514.918339346987 520.261244602316 27.19 0.41733 27.19 26.883 27.3 0 55 20 6 0 0 0 0.0064481 1 12529 34.515 34.515 1 0.93541 1.0675 0 12691000 7103100 5587900 19056 816 7189 7357 29818 29818 KPPCCVLSNPDQK 13 2 0 Unmodified _KPPCCVLSNPDQK_ 0 0 1 B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4;S4R308;K7ESG9;K7EKH0;K7EJB0;Q7Z3K7;C9JWJ8;K7EN08;D2DXM9;B4DHW2;Q14938;K7EMQ5 B1AKN6 B1AKN6 NFIA;NFIX;DKFZp686I05275 Nuclear factor 1;Nuclear factor 1 A-type;Nuclear factor 1 X-type MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.8896 2 771.873793 1541.73303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.171 1 27.171 26.671 27.671 -1.9073E-06 0 0 0 0.011098 1 12499 64.121 39.283 1 19057 816 7189 7357 29819 29819 KPPCCVLSNPDQK 13 2 0 Unmodified _KPPCCVLSNPDQK_ 0 0 1 B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4;S4R308;K7ESG9;K7EKH0;K7EJB0;Q7Z3K7;C9JWJ8;K7EN08;D2DXM9;B4DHW2;Q14938;K7EMQ5 B1AKN6 B1AKN6 NFIA;NFIX;DKFZp686I05275 Nuclear factor 1;Nuclear factor 1 A-type;Nuclear factor 1 X-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.9181 3 514.918287 1541.73303 85608.36 0.22847 0.00011764 -0.46659 -0.00024026 -0.23812 -0.00012261 514.918166015255 520.260904836817 31.683 0.35006 31.683 31.462 31.812 -1.9073E-06 81 19 7 0 0 0 0.019692 1 13484 23.934 23.934 1 0.77844 0.68773 0 2450800 1396100 1054700 19058 816 7189 7357 29820 29820 KPPLLNNADSVQAK 14 2 0 Unmodified _KPPLLNNADSVQAK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.92 2 747.917372 1493.82019 70090.23 0.6015 0.00044988 0.082011 6.1337E-05 0.68352 0.00051121 747.917452062205 755.931639301768 37.653 0.57253 37.653 37.435 38.007 0 299 46 10 0 0 0 0.00014866 2 19097 104.24 89.1 1 0.6466 0.76281 0 231610000 138790000 92814000 19059 139 7190 7358 29821;29822 29822 KPPLLNNADSVQAK 14 2 0 Unmodified _KPPLLNNADSVQAK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.9474 3 498.94734 1493.82019 85074 0.29753 0.00014845 -0.1055 -5.264E-05 0.19202 9.5809E-05 498.94745688875 504.289906416639 37.653 0.72326 37.653 37.401 38.125 0 378 60 11 0 0 0 1.0574E-06 2 19133 100.22 89.578 1 0.63287 0.74642 0 389860000 234870000 154990000 19060 139 7190 7358 29823;29824 29823 KPPLLNNADSVQAK 14 2 0 Unmodified _KPPLLNNADSVQAK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.2903 3 498.94734 1493.82019 84656.95 0.4162 0.00020766 0.21683 0.00010819 0.63303 0.00031585 498.947489572134 504.29006882078 36.291 0.60415 36.291 36.092 36.696 0 329 50 11 0 0 0 3.4766E-07 2 18599 108.59 88.499 1 0.64684 0.75604 0 539740000 321640000 218100000 19061 139 7190 7358 29825;29826 29826 KPPLLNNADSVQAK 14 2 0 Unmodified _KPPLLNNADSVQAK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.931 2 747.917372 1493.82019 70035.02 0.81204 0.00060734 -0.0052316 -3.9128E-06 0.80681 0.00060342 747.91734625709 755.93152687924 36.305 0.50049 36.305 36.113 36.613 0 243 42 9 0 0 0 3.3281E-21 2 18553 162.22 162.22 1 0.63746 0.74236 0 214910000 127450000 87462000 19062 139 7190 7358 29827;29828 29828 KPPLLNNADSVQAK 14 2 0 Unmodified _KPPLLNNADSVQAK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 504.2903 3 498.94734 1493.82019 83704.12 0.24137 0.00012043 0.049096 2.4496E-05 0.29047 0.00014493 498.947308583926 504.290012772584 42.698 0.82089 42.698 42.444 43.265 0 344 53 10 0 0 0 5.6191E-05 2 19908 65.895 53.018 1 1.1041 0.93725 0 46810000 21449000 25361000 19063 139 7190 7358 29829;29830 29829 KPPLLNNADSVQAK 14 2 0 Unmodified _KPPLLNNADSVQAK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 755.9321 2 747.917372 1493.82019 69882.38 0.65744 0.00049171 -0.036071 -2.6978E-05 0.62137 0.00046473 747.917355425398 755.931574806253 42.731 0.64315 42.731 42.444 43.087 -3.8147E-06 262 42 9 0 0 0 0.023662 1 19890 39.581 39.581 1 1.0492 0.8939 0 23403000 11565000 11838000 19064 139 7190 7358 29831 29831 KPPLLNNADSVQAK 14 2 0 Unmodified _KPPLLNNADSVQAK_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.9472 3 498.94734 1493.82019 84943.26 -0.15849 -7.9078E-05 0.0066989 3.3424E-06 -0.15179 -7.5736E-05 498.947388982696 504.290049924605 42.616 0.93746 42.616 42.355 43.292 3.8147E-06 285 58 8 0 0 0 3.1397E-05 2 19331 80.96 72.139 1 1.0869 0.9256 0 41548000 18982000 22566000 19065 139 7190 7358 29832;29833 29833 KPPPVPALPSK 11 2 0 Unmodified _KPPPVPALPSK_ 0 0 1 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 382.9116 3 377.569253 1129.68593 NaN NaN NaN -0.098842 -3.732E-05 NaN NaN NaN NaN 46.488 0.42431 46.488 46.27 46.694 3.8147E-06 0 0 0 0.017849 1 25188 41.242 27.842 1 NaN NaN 0 6526900 0 6526900 19066 1731;1802 7191 7359 29834 29834 KPPTDEELK 9 2 0 Unmodified _KPPTDEELK_ 0 0 1 B4DNW3;H0Y993;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.7818 2 528.782222 1055.54989 82708.05 -0.043362 -2.2929E-05 0.24968 0.00013203 0.20632 0.0001091 528.78233707046 536.796451685319 18.605 0.82082 18.605 18.417 19.238 0 233 51 9 0 0 0 1.4505E-07 2 5453 141.02 50.649 1 0.6106 0.72018 0 359780000 223260000 136510000 19067 1546;1018 7192 7360 29835;29836 29835 KPPTDEELK 9 2 0 Unmodified _KPPTDEELK_ 0 0 1 B4DNW3;H0Y993;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.7817 2 528.782222 1055.54989 82440.65 0.38112 0.00020153 -0.16452 -8.6997E-05 0.2166 0.00011453 528.782109900903 536.796264269752 18.541 0.78769 18.541 18.238 19.025 0 182 45 6 0 0 0 1.3017E-05 2 5164 129.63 42.444 1 0.62396 0.7238 0 80642000 52107000 28535000 19068 1546;1018 7192 7360 29837;29838 29837 KPPVKPPTEPIGFDLEIEK 19 3 0 Unmodified _KPPVKPPTEPIGFDLEIEK_ 0 0 2 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.0656 3 712.064662 2133.17216 NaN NaN NaN 0.2556 0.000182 NaN NaN NaN NaN 93.637 0.36879 93.637 93.443 93.812 0 0 0 0 0.033394 1 56861 28.14 24.536 1 NaN NaN 0 12735000 12735000 0 19069 1837 7193 7361 29839 29839 KPPVKPPTEPIGFDLEIEK 19 3 0 Unmodified _KPPVKPPTEPIGFDLEIEK_ 0 0 2 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.0801 3 712.064662 2133.17216 NaN NaN NaN 0.60446 0.00043042 NaN NaN NaN NaN 90.88 0.52229 90.88 90.528 91.05 0 0 0 0 0.0086747 1 56293 37.112 27.849 1 NaN NaN 0 17263000 0 17263000 19070 1837 7193 7361 29840 29840 KPPVKPPTEPIGFDLEIEK 19 3 0 Unmodified _KPPVKPPTEPIGFDLEIEK_ 0 0 2 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.0795 3 712.064662 2133.17216 71973.86 0.669 0.00047637 0.12289 8.7507E-05 0.7919 0.00056388 712.398941451988 720.078964758733 102.76 0.86375 102.76 102.46 103.33 0 402 57 10 0 0 0 0.0032413 1 58288 33.833 33.833 1 1.2433 1.1645 0 27962000 12365000 15597000 19071 1837 7193 7361 29841 29841 KPPVKPPTEPIGFDLEIEK 19 3 0 Unmodified _KPPVKPPTEPIGFDLEIEK_ 0 0 2 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.0658 3 712.064662 2133.17216 72181.24 0.51005 0.00036319 0.22111 0.00015744 0.73116 0.00052063 712.398994124259 720.078982815159 102.32 0.78233 102.32 102 102.78 0 386 55 10 0 0 0 0.024695 1 57075 23.172 23.172 1 1.2696 1.2557 0 27346000 10804000 16542000 19072 1837 7193 7361 29842 29842 KPQAILEEK 9 2 0 Unmodified _KPQAILEEK_ 0 0 1 Q8N556;Q6ZRV0 Q8N556 Q8N556 AFAP1 Actin filament-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.3226 2 528.308406 1054.60226 NaN NaN NaN -0.34533 -0.00018244 NaN NaN NaN NaN 23.917 0.22475 23.917 23.813 24.038 0 0 0 0 3.4457E-05 1 9738 106.2 70.761 1 NaN NaN 0 6599700 0 6599700 19073 1910 7194 7362 29843 29843 KPQAILEEK 9 2 0 Unmodified _KPQAILEEK_ 0 0 1 Q8N556;Q6ZRV0 Q8N556 Q8N556 AFAP1 Actin filament-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.3229 2 528.308406 1054.60226 NaN NaN NaN 0.15775 8.334E-05 NaN NaN NaN NaN 23.391 0.27346 23.391 23.268 23.542 0 0 0 0 3.4516E-05 1 9296 106.18 62.37 1 NaN NaN 0 7323600 0 7323600 19074 1910 7194 7362 29844 29844 KPQAILEEK 9 2 0 Unmodified _KPQAILEEK_ 0 0 1 Q8N556;Q6ZRV0 Q8N556 Q8N556 AFAP1 Actin filament-associated protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.3034 2 528.308406 1054.60226 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.372 1 23.372 22.872 23.872 0 0 0 0 0.0075604 1 9252 85.862 58.558 1 19075 1910 7194 7362 29845 29845 KPQAILEEK 9 2 0 Unmodified _KPQAILEEK_ 0 0 1 Q8N556;Q6ZRV0 Q8N556 Q8N556 AFAP1 Actin filament-associated protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.309 2 528.308406 1054.60226 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.384 1 23.384 22.884 23.884 -1.9073E-06 0 0 0 0.0056702 1 9262 90.709 65.15 1 19076 1910 7194 7362 29846 29846 KPQDQLVIER 10 1 1 Unmodified _KPQDQLVIER_ 0 0 1 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;H0YDQ3 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.2424 3 409.234822 1224.68264 95540.96 0.14585 5.9685E-05 -0.28004 -0.0001146 -0.13419 -5.4916E-05 409.234814832019 415.242099654743 33.489 0.37171 33.489 33.367 33.738 0 71 29 5 0 0 0 0.01593 1 16823 34.501 26.614 1 1.49 1.6663 0 11894000 3210100 8683800 19077 640 7195 7363 29847 29847 KPQLDVTR 8 1 1 Unmodified _KPQLDVTR_ 0 0 1 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.7801 2 478.779816 955.545079 85124.1 -0.46904 -0.00022456 0.45246 0.00021663 -0.016575 -7.9359E-06 478.779983513985 487.791230434413 21.993 0.54927 21.993 21.801 22.35 0 138 32 7 0 0 0 0.0017158 1 8108 126.24 63.525 1 0.92586 1.122 0 276620000 141760000 134860000 19078 1750 7196 7364 29848 29848 KPQLDVTR 8 1 1 Unmodified _KPQLDVTR_ 0 0 1 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.7799 2 478.779816 955.545079 84172.16 0.10926 5.2314E-05 -0.20629 -9.8768E-05 -0.097026 -4.6454E-05 478.779694986209 487.790863937875 21.634 0.72511 21.634 21.382 22.107 0 166 33 9 0 0 0 3.9628E-09 2 7704 163.15 86.304 1 0.8699 1.0328 0 326120000 167660000 158470000 19079 1750 7196 7364 29849;29850 29849 KPQLDVTR 8 1 1 Unmodified _KPQLDVTR_ 0 0 1 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 319.522 3 319.522303 955.545079 107318.7 0.090733 2.8991E-05 -0.6616 -0.0002114 -0.57087 -0.0001824 319.522104301945 325.529560928405 21.666 0.28357 21.666 21.541 21.825 0 34 14 4 0 0 0 0.01542 1 7793 39.547 20.94 1 1.0793 1.1947 0 7688100 3232700 4455400 19080 1750 7196 7364 29851 29851 KPQLDVTR 8 1 1 Unmodified _KPQLDVTR_ 0 0 1 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.7801 2 478.779816 955.545079 85334 0.087596 4.1939E-05 -0.18035 -8.6346E-05 -0.09275 -4.4407E-05 478.779671020347 487.79090643305 23.591 0.54327 23.591 23.346 23.889 1.9073E-06 148 27 8 0 0 0 0.015343 2 7984 82.645 36.629 1 0.88658 0.77776 0 29828000 15925000 13903000 19081 1750 7196 7364 29852;29853 29852 KPQLDVTR 8 1 1 Unmodified _KPQLDVTR_ 0 0 1 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.7798 2 478.779816 955.545079 86227.98 0.13599 6.5107E-05 0.0087997 4.2131E-06 0.14479 6.9321E-05 478.779742359299 487.79101624483 23.404 0.63331 23.404 23.125 23.758 0 161 31 9 0 0 0 0.01416 2 7353 85.67 33.883 1 0.93623 0.79499 0 23832000 12997000 10835000 19082 1750 7196 7364 29854;29855 29854 KPSISITTESLK 12 2 0 Unmodified _KPSISITTESLK_ 0 0 1 G3V3B0;Q69YJ6;S4R3H4;E7EQT4;Q9UKV3;B4DQZ7;G3V3T3 G3V3B0 G3V3B0 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3779 2 652.377017 1302.73948 76894.73 0.81148 0.00052939 -0.061754 -4.0287E-05 0.74973 0.00048911 652.376702630202 660.391265703639 52.316 0.66911 52.316 52.017 52.687 0 184 50 6 0 0 0 0.008159 1 29756 52.391 38.272 1 1.2418 1.4315 0 28242000 12659000 15583000 19083 1220 7197 7365 29856 29856 KPSSSASSSSSSSSFSLDAAGASLATLPGGSILQPR 36 1 1 Unmodified _KPSSSASSSSSSSSFSLDAAGASLATLPGGSILQPR_ 0 0 1 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1138.9121 3 1132.56902 3394.68522 58114.19 0.23476 0.00026588 0.73405 0.00083136 0.9688 0.0010972 1132.90344529861 1138.91123203617 129.07 0.34747 129.07 128.87 129.22 0 94 16 10 0 0 0 0.034031 2 78031 7.805 7.805 1 1.5051 1.2535 0 3574000 1330600 2243400 19084 1879 7198 7366 29857;29858 29857 KPSSSASSSSSSSSFSLDAAGASLATLPGGSILQPR 36 1 1 Unmodified _KPSSSASSSSSSSSFSLDAAGASLATLPGGSILQPR_ 0 0 1 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1138.5752 3 1132.56902 3394.68522 58066.96 0.41681 0.00047207 0.26851 0.0003041 0.68532 0.00077618 1132.90253695437 1138.9109542891 128.94 0.31015 128.94 128.72 129.03 1.5259E-05 56 10 8 0 0 0 0.050789 1 77028 3.9213 3.9213 1 1.3046 1.1015 0 3774200 1343100 2431100 19085 1879 7198 7366 29859 29859 KPSTSDDSDSNFEK 14 2 0 Unmodified _KPSTSDDSDSNFEK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.5621 3 519.56188 1555.66381 84117.68 0.27593 0.00014336 -0.15981 -8.3033E-05 0.11611 6.0327E-05 519.561944998482 524.9043199679 16.972 0.32272 16.972 16.858 17.181 0 35 10 6 0 0 0 7.916E-22 1 4200 116.58 113.26 1 0.8086 0.93677 0 10497000 5732800 4764000 19086 1471 7199 7367 29860 29860 KPSTSDDSDSNFEK 14 2 0 Unmodified _KPSTSDDSDSNFEK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.8392 2 778.839182 1555.66381 67334.5 0.50669 0.00039463 -0.50947 -0.0003968 -0.0027785 -2.164E-06 778.839035922825 786.852345223347 16.975 0.29664 16.975 16.884 17.181 0 41 9 8 0 0 0 1.102E-37 2 4205 171.73 152.68 1 0.79655 0.91425 0 8726700 4614600 4112100 19087 1471 7199 7367 29861;29862 29861 KPTHSQEPQGPEAMER 16 1 1 Oxidation (M) _KPTHSQEPQGPEAM(ox)ER_ KPTHSQEPQGPEAM(1)ER KPTHSQEPQGPEAM(40.24)ER 0 1 1 O95602;B7ZKR9;B7Z8X7;B7Z284;Q53T12;Q96AG9 O95602 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.2958 3 613.288096 1836.84246 76473.59 -0.20168 -0.00012369 -0.052178 -3.2E-05 -0.25386 -0.00015569 613.622465520559 619.296120246797 15.019 0.28216 15.019 14.913 15.196 0 35 9 6 0 0 0 0.00088796 1 2690 40.237 39.169 1 0.7432 0.82257 0 2262900 1352400 910510 19088 1428 7200 7368 29863 29863 1121 KPTSQIPETK 10 2 0 Unmodified _KPTSQIPETK_ 0 0 1 Q9BQG0;I3L1L3;B4DZZ1;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.8331 2 564.816596 1127.61864 84988.18 0.5532 0.00031245 1.5032 0.00084903 2.0564 0.0011615 564.816578113509 572.832036490671 18.048 0.46239 18.048 17.869 18.332 0 101 30 4 0 0 0 0.0010449 2 5074 83.869 83.869 1 1.0496 1.2041 0 8641000 4108200 4532800 19089 1997 7201 7369 29864;29865 29864 KPVADCVISIPSFFTDAER 19 1 1 Unmodified _KPVADCVISIPSFFTDAER_ 0 0 1 B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;E9PDE8;B4DXT2 B3KNM0 B3KNM0 HSPA4L Heat shock 70 kDa protein 4L MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.9237 3 718.029623 2151.06704 73494.73 0.80434 0.00057754 0.405 0.0002908 1.2093 0.00086835 718.364408573726 724.037320693797 116.45 0.4946 116.45 116.22 116.72 0 75 31 5 0 0 0 0.034788 1 76307 18.623 15.336 1 1.9466 2.1906 0 13517000 5743500 7773400 19090 624 7202 7370 29866 29866 KPVEELTEEEK 11 2 0 Unmodified _KPVEELTEEEK_ 0 0 1 A0A024R8L0;J3QLS3;Q9Y2R9;J3QKW2 A0A024R8L0 A0A024R8L0 MRPS7 28S ribosomal protein S7, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.8544 2 665.840465 1329.66638 72823.38 0.31823 0.00021189 -1.1222 -0.00074722 -0.80399 -0.00053533 665.839872302543 673.854322984459 24.782 0.23833 24.782 24.644 24.883 0 54 11 6 0 0 0 2.775E-05 1 10459 106.26 106.26 1 1.5229 1.8144 0 21636000 9217400 12418000 19091 250 7203 7371 29867 29867 KPVEELTEEEK 11 2 0 Unmodified _KPVEELTEEEK_ 0 0 1 A0A024R8L0;J3QLS3;Q9Y2R9;J3QKW2 A0A024R8L0 A0A024R8L0 MRPS7 28S ribosomal protein S7, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.853 2 665.840465 1329.66638 73705.27 0.43928 0.00029249 -1.726 -0.0011493 -1.2867 -0.00085676 666.340163472992 674.35466850333 24.354 0.31803 24.354 24.176 24.494 0 56 13 6 0 0 0 1.1247E-12 1 10080 147.62 108.87 1 1.2054 1.3762 0 13490000 5784300 7705800 19092 250 7203 7371 29868 29868 KPVIVFVPSR 10 1 1 Unmodified _KPVIVFVPSR_ 0 0 1 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.3595 2 571.358234 1140.70191 80518.82 0.56529 0.00032298 0.028761 1.6433E-05 0.59405 0.00033942 571.35798851317 580.369393737855 68.265 0.89429 68.265 67.831 68.726 0 273 77 6 0 0 0 0.0065143 1 39486 62.463 54.194 1 0.93648 1.0592 0 23267000 11861000 11406000 19093 1411 7204 7372 29869 29869 KPVIVFVPSR 10 1 1 Unmodified _KPVIVFVPSR_ 0 0 1 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 381.2422 3 381.241248 1140.70191 99604.48 0.096132 3.665E-05 0.15648 5.9655E-05 0.25261 9.6305E-05 381.241125032358 387.248697529787 68.2 0.52999 68.2 68.046 68.576 0 162 47 5 0 0 0 0.0016799 1 39499 47.844 37.387 1 0.87596 0.94608 0 10725000 3896100 6829000 19094 1411 7204 7372 29870 29870 KPVIVFVPSR 10 1 1 Unmodified _KPVIVFVPSR_ 0 0 1 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.3702 2 571.358234 1140.70191 81705.67 0.35607 0.00020344 0.46001 0.00026283 0.81608 0.00046628 571.357851972867 580.369791428613 65.91 0.63949 65.91 65.583 66.223 0 200 54 5 0 0 0 0.0041548 2 38877 68.893 59.5 1 0.86194 0.98529 0 21610000 12386000 9224200 19095 1411 7204 7372 29871;29872 29871 KPVIVFVPSR 10 1 1 Unmodified _KPVIVFVPSR_ 0 0 1 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 381.2255 3 381.241248 1140.70191 98025.02 -0.06628 -2.5269E-05 -0.23611 -9.0015E-05 -0.30239 -0.00011528 381.241010563808 387.248729726451 65.951 0.4846 65.951 65.738 66.223 0 131 41 4 0 0 0 0.024012 1 39019 34.231 34.231 1 0.76826 0.86148 0 12564000 7109400 5454700 19096 1411 7204 7372 29873 29873 KPVLGSYR 8 1 1 Unmodified _KPVLGSYR_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.2827 2 460.271627 918.528701 NaN NaN NaN 0.023332 1.0739E-05 NaN NaN NaN NaN 23.19 0.34377 23.19 23.039 23.383 0 0 0 0 0.0036905 1 9074 93.429 71.297 1 NaN NaN 0 19864000 0 19864000 19097 895 7205 7373 29874 29874 KPVSSYLR 8 1 1 Unmodified _KPVSSYLR_ 0 0 1 H7BYN3;Q6LES8;E5KSX8;E5KSU5;Q00059;Q05D31;Q3SX57 H7BYN3 H7BYN3 TFAM Transcription factor A, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.2886 2 475.276909 948.539266 87255.18 0.27256 0.00012954 -0.099258 -4.7175E-05 0.1733 8.2366E-05 475.27645341986 484.288115185962 25.884 0.6269 25.884 25.607 26.234 0 155 37 7 0 0 0 0.029232 1 11290 60.436 30.251 1 1.3094 1.5403 0 74592000 32600000 41992000 19098 1209 7206 7374 29875 29875 KPVTVSPTTPTSPTEGEAS 19 1 0 Unmodified _KPVTVSPTTPTSPTEGEAS_ 0 0 1 B3KM42;E9PHI6;B4DDM4;Q9Y6G9 B3KM42 B3KM42 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.4807 2 943.473103 1884.93165 NaN NaN NaN -0.00050718 -4.7851E-07 NaN NaN NaN NaN 48.378 0.21676 48.378 48.258 48.475 0 0 0 0 0.0011727 1 27043 52.576 44.444 1 NaN NaN 0 3457000 0 3457000 19099 901 7207 7375 29876 29876 KPVTVSPTTPTSPTEGEAS 19 1 0 Unmodified _KPVTVSPTTPTSPTEGEAS_ 0 0 1 B3KM42;E9PHI6;B4DDM4;Q9Y6G9 B3KM42 B3KM42 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 947.4789 2 943.473103 1884.93165 NaN NaN NaN -1.5307 -0.0014441 NaN NaN NaN NaN 58.087 0.37505 58.087 57.987 58.362 0 0 0 0 0.033359 1 28876 31.708 23.576 1 NaN NaN 0 508730 0 508730 19100 901 7207 7375 29877 29877 KPWQLQGEVTAQK 13 2 0 Unmodified _KPWQLQGEVTAQK_ 0 0 1 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.9119 2 756.91209 1511.80963 71495.4 0.74614 0.00056476 0.30658 0.00023205 1.0527 0.00079682 757.413466731916 764.926414728503 46.53 0.35007 46.53 46.313 46.663 0 86 27 5 0 0 0 5.0022E-05 2 25081 98.407 77.63 1 0.72114 0.85773 0 17352000 8688700 8663300 19101 924 7208 7376 29878;29879 29878 KPWQLQGEVTAQK 13 2 0 Unmodified _KPWQLQGEVTAQK_ 0 0 1 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.2734 3 504.943819 1511.80963 87108.83 0.56116 0.00028336 -0.065353 -3.3E-05 0.49581 0.00025036 504.943851556958 510.286304266751 46.517 0.43705 46.517 46.289 46.727 0 131 35 5 0 0 0 0.052687 1 25073 19.839 11.735 1 0.86355 1.0264 0 24445000 13568000 10877000 19102 924 7208 7376 29880 29880 KPWQLQGEVTAQK 13 2 0 Unmodified _KPWQLQGEVTAQK_ 0 0 1 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.4134 2 756.91209 1511.80963 71528.14 0.78031 0.00059063 0.50208 0.00038003 1.2824 0.00097066 757.413349890179 764.92659052077 44.738 0.37845 44.738 44.577 44.956 0 54 19 4 0 0 0 0.0001168 1 24547 95.094 69.051 1 0.93627 1.0703 0 15819000 8413300 7405700 19103 924 7208 7376 29881 29881 KPWQLQGEVTAQK 13 2 0 Unmodified _KPWQLQGEVTAQK_ 0 0 1 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.2492 3 504.943819 1511.80963 85754.36 0.52155 0.00026336 0.63298 0.00031962 1.1545 0.00058298 504.944211394604 510.286732295865 44.752 0.39985 44.752 44.566 44.966 0 141 29 7 0 0 0 0.049244 1 24591 14.432 14.432 1 0.90204 1.0363 0 23302000 11508000 11794000 19104 924 7208 7376 29882 29882 KPWQLQGEVTAQK 13 2 0 Unmodified _KPWQLQGEVTAQK_ 0 0 1 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.2867 3 504.943819 1511.80963 84677.43 0.37662 0.00019017 0.091353 4.6128E-05 0.46797 0.0002363 504.943762026301 510.286617371419 53.572 0.49873 53.572 53.344 53.842 -3.8147E-06 182 34 7 0 0 0 3.6687E-05 2 26644 83.53 78.729 1 1.2738 1.0944 0 7102200 2800800 4301300 19105 924 7208 7376 29883;29884 29884 KPWQLQGEVTAQK 13 2 0 Unmodified _KPWQLQGEVTAQK_ 0 0 1 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.4277 2 756.91209 1511.80963 70415.07 0.61372 0.00046453 0.026844 2.0318E-05 0.64057 0.00048485 756.911551160282 764.926411729186 53.529 0.44851 53.529 53.357 53.805 0 143 30 7 0 0 0 0.00025505 3 26606 95.273 74.496 1 1.2684 1.0951 0 4813800 1895000 2918800 19106 924 7208 7376 29885;29886;29887 29887 KPWQLQGEVTAQK 13 2 0 Unmodified _KPWQLQGEVTAQK_ 0 0 1 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 764.9267 2 756.91209 1511.80963 71323.23 0.49726 0.00037638 -0.013918 -1.0535E-05 0.48334 0.00036585 757.413555472066 764.926238319637 53.765 0.46477 53.765 53.559 54.024 3.8147E-06 148 32 6 0 0 0 0.010064 1 26126 52.495 44.432 1 1.251 1.078 0 3240300 1356900 1883400 19107 924 7208 7376 29888 29888 KPWQLQGEVTAQK 13 2 0 Unmodified _KPWQLQGEVTAQK_ 0 0 1 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.9437 3 504.943819 1511.80963 85107 0.21729 0.00010972 -0.17934 -9.0556E-05 0.037951 1.9163E-05 504.943858968593 510.286538444801 53.756 0.71627 53.756 53.374 54.09 0 242 50 8 0 0 0 1.4181E-09 2 26149 96.059 91.258 1 1.2139 1.0292 0 6341600 3096000 3245600 19108 924 7208 7376 29889;29890 29890 KPYGVLYK 8 2 0 Unmodified _KPYGVLYK_ 0 0 1 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.2849 2 484.284203 966.553853 90263.73 0.071027 3.4397E-05 0.27934 0.00013528 0.35037 0.00016968 484.28384344728 492.298455323548 29.148 0.6741 29.148 29.003 29.677 1.9073E-06 141 48 4 0 0 0 0.021754 1 14176 75.189 14.067 1 0.82113 0.97445 0 26389000 12741000 13647000 19109 773 7209 7377 29891 29891 KPYGVLYK 8 2 0 Unmodified _KPYGVLYK_ 0 0 1 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.2849 2 484.284203 966.553853 86439.71 0.25084 0.00012148 0.3104 0.00015032 0.56124 0.0002718 484.284188370169 492.298410561072 28.218 0.4797 28.218 28.111 28.591 0 70 31 5 0 0 0 0.011854 2 13476 94.662 22.044 1 0.81889 0.9513 0 115940000 60577000 55364000 19110 773 7209 7377 29892;29893 29893 KPYGVLYK 8 2 0 Unmodified _KPYGVLYK_ 0 0 1 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.2842 2 484.284203 966.553853 88020.41 -0.033403 -1.6177E-05 0.35211 0.00017052 0.31871 0.00015434 484.28419228332 492.298440574449 32.9 0.38318 32.9 32.796 33.179 0 97 24 6 0 0 0 0.0027184 2 14347 120.49 40.111 1 1.1214 0.95428 0 29278000 13539000 15739000 19111 773 7209 7377 29894;29895 29895 KPYGVLYK 8 2 0 Unmodified _KPYGVLYK_ 0 0 1 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.2843 2 484.284203 966.553853 86581.74 0.18643 9.0283E-05 0.15658 7.5831E-05 0.34301 0.00016611 484.284096093657 492.298367805114 32.889 0.30782 32.889 32.759 33.067 0 70 13 8 0 0 0 0.003109 2 13820 117.16 39.44 1 1.0285 0.87545 0 38524000 19067000 19457000 19112 773 7209 7377 29896;29897 29897 KPYVLNDLEAEASLPEK 17 2 0 Unmodified _KPYVLNDLEAEASLPEK_ 0 0 1 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.6806 3 639.338563 1914.99386 75979.75 0.97095 0.00062077 0.032838 2.0994E-05 1.0038 0.00064176 639.67251843194 644.681477759697 91.476 0.87993 91.476 90.945 91.825 0 373 70 8 0 0 0 2.8636E-07 2 55318 77.13 77.13 1 0.89469 1.0563 0 52772000 26970000 25801000 19113 2135 7210 7378 29898;29899 29899 KPYVLNDLEAEASLPEK 17 2 0 Unmodified _KPYVLNDLEAEASLPEK_ 0 0 1 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.6824 3 639.338563 1914.99386 75559.5 0.71096 0.00045454 0.22265 0.00014235 0.93361 0.00059689 639.672726744937 644.681487464431 89.951 0.86187 89.951 89.523 90.385 0 391 74 8 0 0 0 3.3342E-13 2 55447 111.34 111.34 1 0.87502 1.0131 0 49641000 26320000 23322000 19114 2135 7210 7378 29900;29901 29901 KPYVLNDLEAEASLPEK 17 2 0 Unmodified _KPYVLNDLEAEASLPEK_ 0 0 1 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.3383 3 639.338563 1914.99386 74177.66 0.59628 0.00038122 0.45702 0.00029219 1.0533 0.00067342 639.672835693968 644.681629460369 103.75 0.79134 103.75 103.5 104.29 0 280 52 9 0 0 0 1.3329E-05 2 58913 62.203 62.203 1 0.83129 0.7076 0 27618000 13716000 13901000 19115 2135 7210 7378 29902;29903 29902 KPYVLNDLEAEASLPEK 17 2 0 Unmodified _KPYVLNDLEAEASLPEK_ 0 0 1 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.3374 3 639.338563 1914.99386 73873.98 0.3948 0.00025241 0.58475 0.00037385 0.97955 0.00062626 639.33890523716 644.68170551816 103.54 0.60916 103.54 103.21 103.82 -7.6294E-06 274 40 9 0 0 0 4.2753E-06 2 57882 69.935 69.935 1 0.8019 0.6806 0 23484000 14400000 9084400 19116 2135 7210 7378 29904;29905 29905 KQDFDEDDILK 11 2 0 Unmodified _KQDFDEDDILK_ 0 0 1 Q8N5A0;A0A087WUT6;O60841;A0JLR8;Q05CQ1 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3449 2 683.330264 1364.64598 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.294 1 58.294 57.794 58.794 0 0 0 0 0.0025769 1 33045 70.942 31.637 1 19117 414 7211 7379 29906 29906 KQDPYLLK 8 2 0 Unmodified _KQDPYLLK_ 0 0 1 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.793 2 502.792392 1003.57023 88449.81 0.97881 0.00049214 -0.13701 -6.8888E-05 0.8418 0.00042325 502.792508680994 510.806348511718 29.725 0.2827 29.725 29.617 29.9 -1.9073E-06 65 19 5 0 0 0 0.0063136 2 14402 95.741 52.22 1 1.0217 1.1689 0 17488000 7778000 9710100 19118 582 7212 7380 29907;29908 29907 KQEEGAEIQCEAETGGTHK 19 2 0 Unmodified _KQEEGAEIQCEAETGGTHK_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3204 3 701.320013 2100.93821 71707.05 0.69276 0.00048585 -0.71793 -0.0005035 -0.025174 -1.7655E-05 701.653608875522 706.662809738056 20.397 0.22815 20.397 20.257 20.485 0 28 7 6 0 0 0 2.8421E-06 1 6707 71.872 71.872 1 0.53451 0.6096 0 11590000 7691000 3899300 19119 44 7213 7381 29909 29909 KQEEGAEIQCEAETGGTHK 19 2 0 Unmodified _KQEEGAEIQCEAETGGTHK_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.6639 3 701.320013 2100.93821 72527.11 0.43985 0.00030848 0.78792 0.00055259 1.2278 0.00086106 701.320532750855 706.663480780917 23.046 0.24691 23.046 22.921 23.168 1.9073E-06 36 9 5 0 0 0 0.029486 1 7667 15.72 15.72 1 1.4282 1.2697 0 1480000 636160 843840 19120 44 7213 7381 29910 29910 KQEELVQQVR 10 1 1 Unmodified _KQEELVQQVR_ 0 0 1 O95983;B3KMA8;K7EIE8 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.852 2 628.851501 1255.68845 76206.93 0.38682 0.00024325 0.16156 0.0001016 0.54838 0.00034485 628.851542017104 637.862833509573 25.638 0.35419 25.638 25.486 25.84 0 98 20 7 0 0 0 4.6585E-08 2 11164 120.31 88.372 1 0.63744 0.75153 0 35299000 21113000 14186000 19121 1432 7214 7382 29911;29912 29911 KQEELVQQVR 10 1 1 Unmodified _KQEELVQQVR_ 0 0 1 O95983;B3KMA8;K7EIE8 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 419.5703 3 419.570093 1255.68845 92517.27 0.46241 0.00019401 0.17418 7.3081E-05 0.63659 0.00026709 419.570147986749 425.577874456802 25.16 0.26608 25.16 25.038 25.304 0 29 9 5 0 0 0 0.00026586 2 10821 64.297 43.641 1 0.47728 0.54224 0 18125000 12520000 5604400 19122 1432 7214 7382 29913;29914 29914 KQEELVQQVR 10 1 1 Unmodified _KQEELVQQVR_ 0 0 1 O95983;B3KMA8;K7EIE8 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.852 2 628.851501 1255.68845 75964.78 0.9031 0.00056792 0.13889 8.7343E-05 1.042 0.00065526 628.851527882147 637.863028693315 25.161 0.26835 25.161 25.012 25.28 0 45 9 7 0 0 0 6.3523E-40 1 10811 191.1 134.44 1 0.619 0.72798 0 71978000 44682000 27296000 19123 1432 7214 7382 29915 29915 KQEELVQQVR 10 1 1 Unmodified _KQEELVQQVR_ 0 0 1 O95983;B3KMA8;K7EIE8 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.8524 2 628.851501 1255.68845 77275.95 0.48136 0.0003027 0.039366 2.4755E-05 0.52072 0.00032746 628.851449218924 637.86274385515 28.38 0.37643 28.38 28.216 28.593 -1.9073E-06 98 18 8 0 0 0 0.0062896 1 11317 63.076 47.815 1 1.8606 1.556 0 6556300 2375400 4180900 19124 1432 7214 7382 29916 29916 KQEELVQQVR 10 1 1 Unmodified _KQEELVQQVR_ 0 0 1 O95983;B3KMA8;K7EIE8 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.8625 2 628.851501 1255.68845 76582.99 0.24199 0.00015218 -0.057814 -3.6357E-05 0.18418 0.00011582 628.851454490008 637.862693092091 28.421 0.57489 28.421 28.13 28.705 -1.9073E-06 140 31 6 0 0 0 0.058896 1 10740 40.724 31.366 1 1.8057 1.5385 0 3043900 1206400 1837400 19125 1432 7214 7382 29917 29917 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 2 0 Unmodified _KQEGPATQVDSAVGTLPATSPQSTSVQAK_ 0 0 1 E7ETY2;B4DRA2 E7ETY2 E7ETY2 TCOF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 967.1709 3 961.827991 2882.46214 62783.26 0.18149 0.00017456 0.25627 0.00024649 0.43776 0.00042105 962.16230827447 967.17117950275 72.138 0.40047 72.138 71.977 72.378 0 113 30 7 0 0 0 0.031599 1 42160 11.255 11.255 1 0.45536 0.52758 0 10513000 5015400 5497200 19126 1225 7215 7383 29918 29918 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 2 0 Unmodified _KQEGPATQVDSAVGTLPATSPQSTSVQAK_ 0 0 1 E7ETY2;B4DRA2 E7ETY2 E7ETY2 TCOF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 967.5048 3 961.827991 2882.46214 63385.09 0.47229 0.00045426 -0.27926 -0.0002686 0.19303 0.00018566 962.162108361422 967.838891821353 70.864 0.36361 70.864 70.664 71.028 0 132 29 8 0 0 0 0.0056489 3 42345 22.034 22.034 1 0.6113 0.69786 0 13344000 7938100 5405500 19127 1225 7215 7383 29919;29920;29921 29920 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 2 0 Unmodified _KQEGPATQVDSAVGTLPATSPQSTSVQAK_ 0 0 1 E7ETY2;B4DRA2 E7ETY2 E7ETY2 TCOF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 962.4968 3 961.827991 2882.46214 62914.83 0.0042463 4.0842E-06 0.64695 0.00062226 0.6512 0.00062634 962.162807501535 967.171689610696 82.618 0.35686 82.618 82.446 82.803 0 102 23 6 0 0 0 0.060709 1 44916 5.5436 5.5436 1 1.3005 1.1437 0 2683300 774670 1908600 19128 1225 7215 7383 29922 29922 KQELEVLTANIQDLK 15 2 0 Unmodified _KQELEVLTANIQDLK_ 0 0 1 Q9HBM1;C9JW94 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.3281 3 581.327998 1740.96216 81878.64 0.71657 0.00041656 -0.15665 -9.1066E-05 0.55992 0.0003255 581.327494252613 586.670740941719 95.018 0.65179 95.018 94.688 95.34 0 173 57 6 0 0 0 0.035006 1 59053 17.895 11.295 1 0.71862 0.81946 0 11377000 6370200 5006800 19129 2050 7216 7384 29923 29923 KQELEVLTANIQDLK 15 2 0 Unmodified _KQELEVLTANIQDLK_ 0 0 1 Q9HBM1;C9JW94 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.3276 3 581.327998 1740.96216 80675.45 0.51458 0.00029914 0.34931 0.00020306 0.86389 0.00050221 581.327678088648 586.671311417498 108.66 0.45453 108.66 108.42 108.87 0 97 23 7 0 0 0 0.038236 1 61554 17.085 11.981 1 0.72434 0.62372 0 3344500 1788500 1556000 19130 2050 7216 7384 29924 29924 KQELLEALTK 10 2 0 Unmodified _KQELLEALTK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.8481 2 586.847896 1171.68124 79521.01 0.54302 0.00031867 0.011326 6.6465E-06 0.55435 0.00032532 586.847842881515 594.861989654813 63.186 1.7275 63.186 62.399 64.127 0 754 167 7 0 0 0 3.5473E-40 3 36323 195.51 138.46 1 0.37448 0.44187 0 150440000 107370000 43071000 19131 82 7217 7385 29925;29926;29927 29927 KQELLEALTK 10 2 0 Unmodified _KQELLEALTK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.848 2 586.847896 1171.68124 79046.07 0.71058 0.000417 -0.34214 -0.00020078 0.36844 0.00021622 586.847599110108 594.861850212002 59.595 1.7813 59.595 59.368 61.149 3.8147E-06 587 143 8 0 0 0 7.845E-10 3 34619 135.99 92.802 1 0.40053 0.4672 0 324570000 216910000 107650000 19132 82 7217 7385 29928;29929;29930 29929 KQELLEALTK 10 2 0 Unmodified _KQELLEALTK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.8625 2 586.847896 1171.68124 78695.02 0.25356 0.0001488 0.44626 0.00026189 0.69982 0.00041069 586.848066207044 594.862506956468 70.995 0.8165 70.995 70.714 71.53 0 311 53 9 0 0 0 0.0019703 1 37275 74.962 54.262 1 0.2852 0.24189 0 55470000 43395000 12075000 19133 82 7217 7385 29931 29931 KQELLEALTK 10 2 0 Unmodified _KQELLEALTK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.8622 2 586.847896 1171.68124 79176.53 0.05506 3.2312E-05 0.18012 0.0001057 0.23518 0.00013802 586.847917712883 594.862253702879 71.117 0.87157 71.117 70.832 71.704 0 280 57 9 0 0 0 1.2543E-05 2 36545 107.11 76.545 1 0.286 0.244 0 57046000 44140000 12906000 19134 82 7217 7385 29932;29933 29932 KQELQPGTAYK 11 2 0 Unmodified _KQELQPGTAYK_ 0 0 1 A6NEM2;P51610;H7C1C4 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.8564 2 631.840602 1261.66665 NaN NaN NaN 1.3476 0.00085145 NaN NaN NaN NaN 22.006 0.2815 22.006 21.86 22.141 0 0 0 0 0.0012048 1 8174 85.154 54.59 1 NaN NaN 0 6633400 0 6633400 19135 680 7218 7386 29934 29934 KQELQPGTAYK 11 2 0 Unmodified _KQELQPGTAYK_ 0 0 1 A6NEM2;P51610;H7C1C4 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.8568 2 631.840602 1261.66665 NaN NaN NaN -0.040263 -2.544E-05 NaN NaN NaN NaN 24.021 0.28078 24.021 23.905 24.186 0 0 0 0 0.002396 1 8312 75.416 42.038 1 NaN NaN 0 3151100 0 3151100 19136 680 7218 7386 29935 29935 KQEQLTPGVVYVR 13 1 1 Unmodified _KQEQLTPGVVYVR_ 0 0 1 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2882 3 506.287586 1515.84093 84796.85 0.50289 0.0002546 -0.1818 -9.2042E-05 0.32109 0.00016256 506.287498609214 512.294822376681 59.369 1.1865 59.369 58.771 59.957 0 480 95 8 0 0 0 6.8082E-05 2 33642 67.019 67.019 1 1.0581 1.274 0 102070000 49136000 52935000 19137 2019 7219 7387 29936;29937 29937 KQEQLTPGVVYVR 13 1 1 Unmodified _KQEQLTPGVVYVR_ 0 0 1 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.9394 2 758.92774 1515.84093 71116.28 0.70093 0.00053196 -0.18669 -0.00014168 0.51425 0.00039028 758.927275060018 767.938834907029 59.371 0.78748 59.371 58.912 59.699 0 195 61 6 0 0 0 0.00019699 2 33842 84.507 67.482 1 0.86092 1.0177 0 38299000 20992000 17307000 19138 2019 7219 7387 29938;29939 29938 KQEQLTPGVVYVR 13 1 1 Unmodified _KQEQLTPGVVYVR_ 0 0 1 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.9394 2 758.92774 1515.84093 70192.94 0.59584 0.0004522 0.15783 0.00011978 0.75367 0.00057198 758.927728514888 767.939076762795 57.436 0.56713 57.436 57.213 57.78 3.8147E-06 250 45 7 0 0 0 1.9682E-38 3 33182 180.97 158.33 1 1.0244 1.2022 0 59122000 26178000 32944000 19139 2019 7219 7387 29940;29941;29942 29941 KQEQLTPGVVYVR 13 1 1 Unmodified _KQEQLTPGVVYVR_ 0 0 1 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.2877 3 506.287586 1515.84093 83955.88 0.34598 0.00017516 -0.28919 -0.00014641 0.056792 2.8753E-05 506.287395326875 512.294775172316 57.443 0.94961 57.443 56.994 57.944 0 402 73 8 0 0 0 6.824E-05 3 33314 66.989 66.989 1 1.0535 1.2451 0 157960000 75729000 82233000 19140 2019 7219 7387 29943;29944;29945 29944 KQEQLTPGVVYVR 13 1 1 Unmodified _KQEQLTPGVVYVR_ 0 0 1 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 512.2957 3 506.287586 1515.84093 84269.92 0.33957 0.00017192 -0.023915 -1.2108E-05 0.31566 0.00015981 506.287646143299 512.294951631532 68.472 0.71927 68.472 68.258 68.977 0 319 55 10 0 0 0 3.2351E-05 2 35718 62.162 59.252 1 1.2999 1.151 0 47538000 20150000 27388000 19141 2019 7219 7387 29946;29947 29946 KQEQLTPGVVYVR 13 1 1 Unmodified _KQEQLTPGVVYVR_ 0 0 1 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.9393 2 758.92774 1515.84093 NaN NaN NaN 0.098714 7.4917E-05 NaN NaN NaN NaN 68.466 0.55878 68.466 68.277 68.836 0 0 0 0 0.011661 1 35721 52.391 46.007 1 NaN NaN 0 13758000 0 13758000 19142 2019 7219 7387 29948 29948 KQEQLTPGVVYVR 13 1 1 Unmodified _KQEQLTPGVVYVR_ 0 0 1 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.2952 3 506.287586 1515.84093 84037.12 0.30467 0.00015425 -0.30916 -0.00015652 -0.0044857 -2.2711E-06 506.287641257553 512.294542946373 68.822 1.4749 68.822 68.243 69.718 0 382 98 10 0 0 0 3.7019E-05 2 35184 71.558 64.518 1 1.3844 1.1782 0 37979000 16392000 21587000 19143 2019 7219 7387 29949;29950 29950 KQGEDNSTAQDTEELEK 17 2 0 Unmodified _KQGEDNSTAQDTEELEK_ 0 0 1 A0A024R9D2;Q86UE4;E5RJU9 A0A024R9D2 A0A024R9D2 MTDH Protein LYRIC MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.6353 3 641.292229 1920.85486 76708.5 0.54962 0.00035247 -0.014573 -9.3455E-06 0.53505 0.00034312 641.291766475527 646.634852823314 24.902 0.44391 24.902 24.732 25.176 0 86 23 7 0 0 0 0.004028 1 8910 20.091 20.091 1 0.51769 0.46313 0 1895600 1315000 580590 19144 275 7220 7388 29951 29951 KQISNLQQSISDAEQR 16 1 1 Unmodified _KQISNLQQSISDAEQR_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.6533 3 615.653544 1843.9388 NaN NaN NaN -0.34399 -0.00021178 NaN NaN NaN NaN 56.619 0.54679 56.619 56.408 56.954 0 0 0 0 0.0003968 1 28543 63.421 52.936 1 NaN NaN 0 4007100 4007100 0 + 19145 1308;1309 7221 7389 29952 29952 KQPPKEPSEVPTPK 14 3 0 Unmodified _KQPPKEPSEVPTPK_ 0 0 2 Q5T6U8;Q6IPL9 Q5T6U8 Q5T6U8 HMGA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.305 3 521.290996 1560.85116 82903 0.4375 0.00022807 -0.13161 -6.8609E-05 0.30589 0.00015946 521.290900674451 529.305055992568 22.697 0.92843 22.697 22.322 23.25 1.9073E-06 356 53 9 0 0 0 4.2725E-06 2 8548 100.31 96.704 1 0.77193 0.92913 0 114650000 66247000 48406000 19146 1823 7222 7390 29953;29954 29954 KQPPKEPSEVPTPK 14 3 0 Unmodified _KQPPKEPSEVPTPK_ 0 0 2 Q5T6U8;Q6IPL9 Q5T6U8 Q5T6U8 HMGA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.3044 3 521.290996 1560.85116 82262.33 0.25281 0.00013179 -0.1846 -9.6228E-05 0.068218 3.5561E-05 521.290911000438 529.305046322083 21.632 0.785 21.632 21.322 22.107 1.9073E-06 240 36 9 0 0 0 2.5118E-06 2 7585 92.265 78.548 1 0.80117 0.93647 0 207020000 111520000 95500000 19147 1823 7222 7390 29955;29956 29955 KQPPKEPSEVPTPK 14 3 0 Unmodified _KQPPKEPSEVPTPK_ 0 0 2 Q5T6U8;Q6IPL9 Q5T6U8 Q5T6U8 HMGA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.4353 2 781.432855 1560.85116 68674.32 0.5587 0.00043659 0.012545 9.8033E-06 0.57125 0.00044639 781.432819650398 793.454077670949 21.627 0.50701 21.627 21.408 21.915 0 130 24 8 0 0 0 0.00079386 2 7611 77.64 77.64 1 0.70987 0.82974 0 64440000 37166000 27274000 19148 1823 7222 7390 29957;29958 29957 KQPPKEPSEVPTPK 14 3 0 Unmodified _KQPPKEPSEVPTPK_ 0 0 2 Q5T6U8;Q6IPL9 Q5T6U8 Q5T6U8 HMGA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.3049 3 521.290996 1560.85116 81592.35 0.31357 0.00016346 -0.19823 -0.00010334 0.11534 6.0126E-05 521.291138650763 529.304975140244 24.365 1.5553 24.365 23.919 25.474 0 642 83 11 0 0 0 0.00015568 3 8766 73.386 73.386 1 0.41718 0.39072 0 87086000 60757000 26329000 19149 1823 7222 7390 29959;29960;29961 29960 KQPPKEPSEVPTPK 14 3 0 Unmodified _KQPPKEPSEVPTPK_ 0 0 2 Q5T6U8;Q6IPL9 Q5T6U8 Q5T6U8 HMGA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.3049 3 521.290996 1560.85116 82326.22 0.23144 0.00012065 -0.093924 -4.8962E-05 0.13752 7.1686E-05 521.291148260241 529.305003297405 24.204 1.564 24.204 23.68 25.244 0 625 87 12 0 0 0 0.00021472 2 8140 59.709 59.709 1 0.42426 0.4196 0 68508000 49280000 19228000 19150 1823 7222 7390 29962;29963 29962 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.4667 2 797.451579 1592.88861 67855.35 0.79227 0.0006318 -0.040031 -3.1923E-05 0.75224 0.00059988 797.451558982417 805.465641728357 42.497 0.42588 42.497 42.11 42.536 3.8147E-06 155 31 9 0 0 0 0.0017297 2 22365 52.693 52.693 1 0.82271 0.97053 0 251540000 136590000 114950000 19151 372 7223 7391 29964;29965 29965 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.9702 3 531.970145 1592.88861 82164.99 0.61616 0.00032778 -0.13973 -7.4334E-05 0.47643 0.00025345 531.970308287322 537.312778682894 42.653 1.8664 42.653 41.971 43.838 0 796 151 9 0 0 0 4.6297E-45 3 22937 165.24 165.24 1 0.728 0.85817 0 1122000000 629240000 492750000 19152 372 7223 7391 29966;29967;29968 29967 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.4662 2 797.451579 1592.88861 68079.81 0.91227 0.00072749 -0.12928 -0.0001031 0.78299 0.0006244 797.45153629047 805.465595870004 42.99 0.58701 42.99 42.876 43.463 0 194 47 8 0 0 0 1.8782E-08 2 22916 117.2 117.2 1 0.70726 0.83459 0 134700000 78694000 56006000 19153 372 7223 7391 29969;29970 29970 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.9704 3 531.970145 1592.88861 82256.11 0.73274 0.0003898 -0.098526 -5.2413E-05 0.63421 0.00033738 531.970244587683 537.312830290742 41.416 1.7828 41.416 40.926 42.709 0 1076 154 11 0 0 0 2.724E-69 4 22487 199.15 199.15 1 0.79171 0.92814 0 1144400000 618230000 526130000 19154 372 7223 7391 29971;29972;29973;29974 29973 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.4519 2 797.451579 1592.88861 67701.7 0.95614 0.00076248 0.20736 0.00016536 1.1635 0.00092783 797.451696096132 805.465966901231 41.497 1.0532 41.497 41.006 42.06 0 624 92 9 0 0 0 8.8756E-05 4 22514 85.287 85.287 1 0.75605 0.8833 0 484010000 266220000 217800000 19155 372 7223 7391 29975;29976;29977;29978 29977 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 531.9706 3 531.970145 1592.88861 81265.81 0.28727 0.00015282 0.020354 1.0828E-05 0.30763 0.00016365 531.970468418444 537.312851764484 49.086 3.2295 49.086 48.465 51.695 0 1524 252 11 0 0 0 5.0118E-07 6 24112 93.768 93.768 1 0.36214 0.30486 0 235100000 171720000 63379000 19156 372 7223 7391 29979;29980;29981;29982;29983;29984 29981 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 797.4517 2 797.451579 1592.88861 67786.28 0.46379 0.00036985 0.11759 9.377E-05 0.58138 0.00046362 797.451654982568 805.465906516372 49.139 1.9763 49.139 48.542 50.518 0 932 163 10 0 0 0 0.00068408 3 24184 66.004 66.004 1 0.36255 0.30713 0 69968000 50723000 19246000 19157 372 7223 7391 29985;29986;29987 29987 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.9708 3 531.970145 1592.88861 81148.42 0.16266 8.6529E-05 0.1289 6.8571E-05 0.29156 0.0001551 531.970565072401 537.312916515011 49.186 3.2247 49.186 48.565 51.79 0 1402 244 11 0 0 0 3.5422E-05 5 23509 76.051 76.051 1 0.37164 0.31951 0 211430000 152420000 59009000 19158 372 7223 7391 29988;29989;29990;29991;29992 29989 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 797.4526 2 797.451579 1592.88861 67473.65 0.30509 0.00024329 0.13194 0.00010521 0.43702 0.00034851 797.451657631381 805.465898156383 49.213 1.843 49.213 48.623 50.466 0 951 144 11 0 0 0 0.00025433 2 23632 65.043 65.043 1 0.36339 0.31041 0 70300000 51420000 18880000 19159 372 7223 7391 29993;29994 29993 KQQAIELTQEEPYSDIIATPGPR 23 1 1 Unmodified _KQQAIELTQEEPYSDIIATPGPR_ 0 0 1 A0A024R9J0;O60216;E5RFZ5;B3KUT8;E5RG18;E5RI01 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 868.789 3 862.113292 2583.31805 67931.05 0.63065 0.00054369 0.01699 1.4647E-05 0.64764 0.00055834 862.113055531316 868.789417039065 109.05 0.29841 109.05 108.9 109.2 0 53 14 6 0 0 0 0.0061725 1 62788 22.32 19.479 1 1.1365 0.96282 0 3053700 1410100 1643600 19160 280 7224 7392 29995 29995 KQQAIELTQEEPYSDIIATPGPR 23 1 1 Unmodified _KQQAIELTQEEPYSDIIATPGPR_ 0 0 1 A0A024R9J0;O60216;E5RFZ5;B3KUT8;E5RG18;E5RI01 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 868.4541 3 862.113292 2583.31805 67457.75 0.50835 0.00043825 0.4781 0.00041218 0.98645 0.00085043 862.448500775418 868.45494196274 108.95 0.33551 108.95 108.77 109.1 0 55 15 6 0 0 0 0.032995 1 61734 11.741 8.9003 1 0.83115 0.71095 0 2784200 1392300 1391900 19161 280 7224 7392 29996 29996 KQTTLAFK 8 2 0 Unmodified _KQTTLAFK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.794 2 468.779285 935.544017 88861.24 0.33042 0.00015489 -0.039512 -1.8522E-05 0.29091 0.00013637 468.779122032808 476.793470838124 26.321 0.31251 26.321 26.176 26.489 0 80 20 6 0 0 0 0.0024447 2 11737 108.81 72.927 1 0.84893 1.0021 0 65782000 34748000 31034000 19162 1471 7225 7393 29997;29998 29997 KQTTLAFK 8 2 0 Unmodified _KQTTLAFK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.779 2 468.779285 935.544017 89951.97 0.40777 0.00019115 0.19757 9.2615E-05 0.60533 0.00028377 468.779307292286 476.793648585034 25.599 0.33782 25.599 25.353 25.69 0 68 15 8 0 0 0 0.0010847 2 11214 129.42 82.987 1 0.72575 0.8433 0 122800000 70731000 52071000 19163 1471 7225 7393 29999;30000 29999 KQTTLAFK 8 2 0 Unmodified _KQTTLAFK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 476.7934 2 468.779285 935.544017 NaN NaN NaN -0.32764 -0.00015359 NaN NaN NaN NaN 28.661 0.33678 28.661 28.524 28.86 0 0 0 0 0.0033671 1 11527 99.136 52.069 1 NaN NaN 0 10507000 0 10507000 19164 1471 7225 7393 30001 30001 KQTTLAFK 8 2 0 Unmodified _KQTTLAFK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 476.7931 2 468.779285 935.544017 89370.06 -0.052501 -2.4611E-05 -0.015722 -7.3701E-06 -0.068222 -3.1981E-05 468.779170099287 476.793404026195 28.514 0.58527 28.514 28.309 28.894 0 167 36 6 0 0 0 0.012658 1 10875 82.426 51.814 1 1.2472 1.0605 0 5652700 2541100 3111600 19165 1471 7225 7393 30002 30002 KQTTLAFKPIK 11 3 0 Unmodified _KQTTLAFKPIK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 433.6136 3 425.599212 1273.77581 90497.02 -0.25258 -0.0001075 0.23511 0.00010006 -0.017468 -7.4345E-06 425.599221104449 433.613481040562 42.702 0.65125 42.702 42.465 43.117 0 199 42 8 0 0 0 0.0058865 1 19961 43.897 35.986 1 1.193 1.1174 0 10975000 4274900 6700600 19166 1471 7226 7394 30003 30003 KQVVNIPSFIVR 12 1 1 Unmodified _KQVVNIPSFIVR_ 0 0 1 A0A024R4M0;P46781;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 467.2849 3 467.285516 1398.83472 89116.8 0.38357 0.00017923 -0.15376 -7.185E-05 0.2298 0.00010738 467.285356009555 473.292997040795 107.3 0.43395 107.3 107.02 107.45 0 69 25 4 0 0 0 0.044718 2 61400 19.277 19.277 1 0.96009 0.85677 0 2136700 1065100 1071600 19167 157 7227 7395 30004;30005 30004 KRPLALQR 8 1 2 Unmodified _KRPLALQR_ 0 0 2 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 327.882 3 327.882054 980.624333 101913.5 -0.044114 -1.4464E-05 0.11178 3.6652E-05 0.06767 2.2188E-05 327.882092897507 337.225617074914 18.368 0.50709 18.368 18.238 18.745 0 35 21 6 0 0 0 0.0072581 1 5083 82.716 38.322 1 0.81136 0.91855 0 39032000 21162000 17870000 19168 1389 7228 7396 30006 30006 KSDFEFTLK 9 2 0 Unmodified _KSDFEFTLK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.7918 2 557.792589 1113.57063 80082.25 0.59891 0.00033407 -0.4984 -0.000278 0.10051 5.6064E-05 557.792016903096 565.806827084416 64.783 0.50249 64.783 64.419 64.922 0 149 44 7 0 0 0 0.00024238 2 38132 108.47 64.023 1 0.91465 1.063 0 128920000 68159000 60765000 19169 1803 7229 7397 30007;30008 30007 KSDFEFTLK 9 2 0 Unmodified _KSDFEFTLK_ 0 0 1 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.8074 2 557.792589 1113.57063 81805.45 0.52065 0.00029042 0.4583 0.00025564 0.97895 0.00054605 557.792669076178 565.80684725604 75.979 0.66132 75.979 75.661 76.322 0 259 44 8 0 0 0 0.058947 1 40548 43.958 26.049 1 1.5161 1.2912 0 24809000 10568000 14241000 19170 1803 7229 7397 30009 30009 KSDGIYIINLK 11 2 0 Unmodified _KSDGIYIINLK_ 0 0 1 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3834 2 632.368995 1262.72344 76232.42 0.5505 0.00034812 0.80638 0.00050993 1.3569 0.00085805 632.368796165102 640.885035078897 92.187 0.50197 92.187 91.967 92.468 0 104 27 6 0 0 0 0.0086739 1 51218 63.32 35.991 1 1.0412 0.90847 0 3124000 1884200 1239900 19171 119 7230 7398 30010 30010 KSDIDEIVLVGGSTR 15 1 1 Unmodified _KSDIDEIVLVGGSTR_ 0 0 1 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2886 3 530.289543 1587.8468 83774.59 0.70183 0.00037217 -0.64316 -0.00034106 0.058666 3.111E-05 530.289092698472 536.631044836975 80.133 0.43274 80.133 79.999 80.432 0 109 36 5 0 0 0 0.0027686 1 47651 27.149 22.011 1 0.63749 0.68757 0 14452000 8455100 5996900 19172 1466 7231 7399 30011 30011 KSDIDEIVLVGGSTR 15 1 1 Unmodified _KSDIDEIVLVGGSTR_ 0 0 1 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.2907 3 530.289543 1587.8468 83319.37 0.66797 0.00035422 0.029032 1.5396E-05 0.697 0.00036961 530.290104767534 536.296450422854 91.023 0.46503 91.023 90.812 91.277 7.6294E-06 127 27 7 0 0 0 0.0020839 1 50478 27.85 27.85 1 0.58243 0.48757 0 3408700 2134000 1274700 19173 1466 7231 7399 30012 30012 KSDIDEIVLVGGSTR 15 1 1 Unmodified _KSDIDEIVLVGGSTR_ 0 0 1 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.2904 3 530.289543 1587.8468 83018.15 0.35643 0.00018901 -0.004025 -2.1344E-06 0.35241 0.00018688 530.289973645524 536.296648451216 90.801 0.47191 90.801 90.568 91.04 0 99 24 6 0 0 0 0.0036871 1 49508 23.799 23.799 1 0.54255 0.4617 0 3131600 1729400 1402200 19174 1466 7231 7399 30013 30013 KSDPVVSYR 9 1 1 Unmodified _KSDPVVSYR_ 0 0 1 P13639;Q8TA90;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.794 2 525.782556 1049.55056 NaN NaN NaN 0.65977 0.00034689 NaN NaN NaN NaN 22.878 0.29694 22.878 22.748 23.045 0 0 0 0 0.0005814 1 8876 90.906 53.347 1 NaN NaN 0 32090000 0 32090000 19175 1478 7232 7400 30014 30014 KSDPVVSYR 9 1 1 Unmodified _KSDPVVSYR_ 0 0 1 P13639;Q8TA90;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.7939 2 525.782556 1049.55056 81958.28 0.56102 0.00029498 0.74126 0.00038974 1.3023 0.00068472 525.782275434485 534.793710049593 22.35 0.44735 22.35 22.14 22.588 0 74 19 7 0 0 0 0.0035317 2 8328 76.679 51.756 1 2.9417 3.4379 0 49506000 13268000 36238000 19176 1478 7232 7400 30015;30016 30015 KSDSNPLTEILK 12 2 0 Unmodified _KSDSNPLTEILK_ 0 0 1 Q5W009;Q96I25 Q5W009 Q5W009 RBM17 Splicing factor 45 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.8866 2 672.872099 1343.72965 NaN NaN NaN -0.081248 -5.467E-05 NaN NaN NaN NaN 84.226 0.41359 84.226 84.073 84.487 0 0 0 0 0.052704 1 51729 41.598 4.4065 1 NaN NaN 0 6492300 0 6492300 19177 1836 7233 7401 30017 30017 KSDVEAIFSK 10 2 0 Unmodified _KSDVEAIFSK_ 0 0 1 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.3175 2 562.303321 1122.59209 80653.09 0.32461 0.00018253 0.12157 6.8357E-05 0.44618 0.00025089 562.303353265231 570.317577747399 50.189 0.75964 50.189 49.834 50.594 0 385 72 9 0 0 0 0.018038 2 27578 52.903 20.11 1 1.145 1.35 0 735480000 322430000 413050000 19178 837;781 7234 7402 30018;30019 30018 KSDVEAIFSK 10 2 0 Unmodified _KSDVEAIFSK_ 0 0 1 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.3032 2 562.303321 1122.59209 80850.31 0.96456 0.00054238 -0.37909 -0.00021316 0.58547 0.00032921 562.303064228347 570.317269493563 48.304 0.85822 48.304 48.054 48.912 0 304 63 9 0 0 0 9.9749E-12 2 26944 143.5 86.454 1 1.1218 1.3136 0 853460000 396460000 457000000 19179 837;781 7234 7402 30020;30021 30021 KSDVEAIFSK 10 2 0 Unmodified _KSDVEAIFSK_ 0 0 1 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.3036 2 562.303321 1122.59209 80544.74 0.61394 0.00034522 -0.23236 -0.00013066 0.38158 0.00021456 562.303252052575 570.317449605711 57.295 0.95305 57.295 56.996 57.949 -3.8147E-06 389 70 10 0 0 0 0.014249 2 28910 55.98 35.008 1 0.62659 0.53124 0 59525000 36140000 23385000 19180 837;781 7234 7402 30022;30023 30022 KSDVEAIFSK 10 2 0 Unmodified _KSDVEAIFSK_ 0 0 1 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.3035 2 562.303321 1122.59209 81555.27 0.6006 0.00033772 -0.28808 -0.00016199 0.31253 0.00017573 562.303142056736 570.317344498424 57.428 0.88533 57.428 57.134 58.019 -3.8147E-06 336 60 9 0 0 0 1.8595E-22 2 28432 172.21 124.56 1 0.61464 0.52407 0 51456000 31201000 20255000 19181 837;781 7234 7402 30024;30025 30025 KSDVETIFSK 10 2 0 Unmodified _KSDVETIFSK_ 0 0 1 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM1;Q5QPM2;B4DSJ1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.3229 2 577.308603 1152.60265 NaN NaN NaN 0.44415 0.00025641 NaN NaN NaN NaN 47.452 0.41969 47.452 47.099 47.519 0 0 0 0 0.0011464 1 25712 87.667 32.118 1 NaN NaN 0 14266000 0 14266000 19182 741 7235 7403 30026 30026 KSDVETIFSK 10 2 0 Unmodified _KSDVETIFSK_ 0 0 1 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM1;Q5QPM2;B4DSJ1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.324 2 577.308603 1152.60265 79846.26 0.67846 0.00039168 -0.037046 -2.1387E-05 0.64141 0.00037029 577.308426830917 585.322711875421 45.659 0.75806 45.659 45.264 46.023 0 291 66 7 0 0 0 4.6266E-06 2 25104 110.66 42.764 1 0.91177 1.057 0 69010000 33178000 35832000 19183 741 7235 7403 30027;30028 30028 KSEIEYYAMLAK 12 2 0 Oxidation (M) _KSEIEYYAM(ox)LAK_ KSEIEYYAM(1)LAK KSEIEYYAM(62.3)LAK 0 1 1 E5RI99;A0A024R9D3;P62888 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 731.369 2 731.368335 1460.72212 70398.41 0.62198 0.0004549 0.60158 0.00043998 1.2236 0.00089488 731.368321982629 739.382955363744 78.606 0.48203 78.606 78.38 78.862 0 174 30 9 0 0 0 0.0023638 1 42202 62.298 62.298 1 0.64167 0.54926 0 9384900 5875100 3509800 19184 276 7236 7404 30029 30029 211 KSEIEYYAMLAK 12 2 0 Unmodified _KSEIEYYAMLAK_ 0 0 1 E5RI99;A0A024R9D3;P62888 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.3849 2 723.370878 1444.7272 NaN NaN NaN -0.6883 -0.00049789 NaN NaN NaN NaN 89.461 0.49341 89.461 89.228 89.722 0 0 0 0 0.013887 1 48719 53.567 46.288 1 NaN NaN 0 2750200 0 2750200 19185 276 7236 7405 30030 30030 KTEIQNIEFEPK 12 2 0 Unmodified _KTEIQNIEFEPK_ 0 0 1 A0A0D9SFM0;Q149N8;H7C2W2;K4DI94 A0A0D9SFM0 A0A0D9SFM0 SHPRH E3 ubiquitin-protein ligase SHPRH MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.9404 3 492.596196 1474.76676 87461.94 0.22059 0.00010866 0.55756 0.00027465 0.77815 0.00038331 492.596396443501 497.939514109044 67.916 0.32304 67.916 67.727 68.05 0 58 20 4 0 0 0 0.038681 1 35405 14.393 14.393 1 1.8562 1.6522 0 1551100 467620 1083500 19186 527 7237 7406 30031 30031 KTESAVSQMQSVIELGR 17 1 1 Oxidation (M) _KTESAVSQM(ox)QSVIELGR_ KTESAVSQM(1)QSVIELGR KTESAVSQM(51.54)QSVIELGR 0 1 1 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.9998 3 626.991169 1877.95168 NaN NaN NaN -0.17714 -0.00011107 NaN NaN NaN NaN 53.863 0.20497 53.863 53.757 53.962 0 0 0 0 0.00060944 1 30766 51.535 41.478 1 NaN NaN 0 5894400 0 5894400 19187 1561 7238 7407 30032 30032 1311 KTEVLMENFR 10 1 1 Oxidation (M) _KTEVLM(ox)ENFR_ KTEVLM(1)ENFR KTEVLM(119.22)ENFR 0 1 1 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.8269 2 641.826637 1281.63872 74411.92 0.70733 0.00045399 -0.13847 -8.8875E-05 0.56886 0.00036511 641.82658963419 650.837767391093 38.488 0.31437 38.488 38.346 38.661 0 118 25 6 0 0 0 7.6565E-08 2 19775 119.22 110.31 1 1.1978 1.4309 0 52822000 23717000 29105000 19188 1076 7239 7408 30033;30034 30034 827 KTIEESEETLK 11 2 0 Unmodified _KTIEESEETLK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.8557 2 653.840465 1305.66638 75263.52 0.65767 0.00043001 0.24378 0.00015939 0.90145 0.0005894 653.840543957467 661.854751987315 27.609 0.39876 27.609 27.358 27.756 0 48 10 7 0 0 0 3.3546E-06 1 10784 111.94 111.94 1 1.8563 1.6072 0 3632800 1294000 2338900 19189 69 7240 7409 30035 30035 KTIEESEETLK 11 2 0 Unmodified _KTIEESEETLK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.8547 2 653.840465 1305.66638 74385.34 0.2876 0.00018804 0.031478 2.0582E-05 0.31908 0.00020862 653.840537932277 661.854631940583 27.665 0.36624 27.665 27.48 27.846 0 52 13 6 0 0 0 0.0029035 1 10284 65.241 47.729 1 2.1208 1.8353 0 2802500 968540 1833900 19190 69 7240 7409 30036 30036 KTPESKPTILVK 12 3 0 Unmodified _KTPESKPTILVK_ 0 0 2 Q9Y3B9;A8K201;A0JLN3 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.6102 3 447.609777 1339.8075 88728.05 0.11967 5.3564E-05 -0.18511 -8.2857E-05 -0.065443 -2.9293E-05 447.609843364184 455.62357658334 27.687 0.29953 27.687 27.538 27.838 -1.9073E-06 129 20 9 0 0 0 0.010147 1 12871 46.387 33.202 1 0.81577 0.9819 0 80429000 40578000 39851000 19191 2134 7241 7410 30037 30037 KTPESKPTILVK 12 3 0 Unmodified _KTPESKPTILVK_ 0 0 2 Q9Y3B9;A8K201;A0JLN3 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.933 2 670.911027 1339.8075 73528.34 0.88053 0.00059076 0.16569 0.00011116 1.0462 0.00070192 670.911101444493 682.932406854648 25.951 0.15264 25.951 25.849 26.002 0 37 9 5 0 0 0 0.0019374 1 11423 73.632 46.303 1 0.89557 1.0468 0 15237000 8790800 6446500 19192 2134 7241 7410 30038 30038 KTPETIPLTEDVLITLGK 18 2 0 Unmodified _KTPETIPLTEDVLITLGK_ 0 0 1 D6RJF0;D6RHD3;Q9BS16;D6RBN6;D6RAX0;D6RC76 D6RJF0 D6RJF0 CENPK Centromere protein K ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.0564 3 656.713629 1967.11906 NaN NaN NaN -0.23311 -0.00015309 NaN NaN NaN NaN 118.25 0.3493 118.25 118.08 118.43 0 0 0 0 0.0055133 1 75890 38.017 28.854 1 NaN NaN 0 3289700 0 3289700 19193 1203 7242 7411 30039 30039 KTPETIPLTEDVLITLGK 18 2 0 Unmodified _KTPETIPLTEDVLITLGK_ 0 0 1 D6RJF0;D6RHD3;Q9BS16;D6RBN6;D6RAX0;D6RC76 D6RJF0 D6RJF0 CENPK Centromere protein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.393 3 656.713629 1967.11906 75317.95 0.99112 0.00065088 0.68303 0.00044856 1.6741 0.0010994 656.713008587325 662.392215923006 129.58 0.21857 129.58 129.38 129.6 0 41 10 6 0 0 0 0.00022681 1 77486 39.387 37.89 1 0.82255 0.69746 0 6312500 3421600 2890900 19194 1203 7242 7411 30040 30040 KTPPAPSPFDLPELK 15 2 0 Unmodified _KTPPAPSPFDLPELK_ 0 0 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.3034 3 546.303013 1635.88721 82497.01 0.74146 0.00040506 0.18856 0.00010301 0.93003 0.00050808 546.302924072155 551.646046560131 97.51 1.149 97.51 97.014 98.163 0 418 98 6 0 0 0 0.00014246 3 59762 43.791 43.791 1 0.90461 1.0678 0 71951000 36778000 35173000 19195 1803 7243 7412 30041;30042;30043 30043 KTPPAPSPFDLPELK 15 2 0 Unmodified _KTPPAPSPFDLPELK_ 0 0 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.6464 3 546.303013 1635.88721 81733.56 0.58058 0.00031717 0.28718 0.00015689 0.86776 0.00047406 546.637405361453 551.646033483671 96.1 0.90994 96.1 95.708 96.618 0 442 78 8 0 0 0 5.566E-05 2 59724 66.965 56.111 1 0.90318 1.0491 0 111970000 60286000 51682000 19196 1803 7243 7412 30044;30045 30045 KTPPAPSPFDLPELK 15 2 0 Unmodified _KTPPAPSPFDLPELK_ 0 0 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.3034 3 546.303013 1635.88721 81836.86 0.61036 0.00033344 -0.033919 -1.853E-05 0.57644 0.00031491 546.302898366467 551.645796865792 109.78 0.68265 109.78 109.52 110.21 0 213 35 10 0 0 0 0.00021355 2 63211 45.723 41.255 1 1.7885 1.5211 0 32829000 11852000 20978000 19197 1803 7243 7412 30046;30047 30047 KTPPAPSPFDLPELK 15 2 0 Unmodified _KTPPAPSPFDLPELK_ 0 0 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.3038 3 546.303013 1635.88721 80815.59 0.68424 0.0003738 -0.11429 -6.2435E-05 0.56996 0.00031137 546.637176805547 551.645729227814 109.53 0.59812 109.53 109.26 109.86 0 180 27 10 0 0 0 3.7399E-05 2 62097 62.055 50.794 1 1.6361 1.3894 0 26039000 9942500 16097000 19198 1803 7243 7412 30048;30049 30049 KTPTVIHK 8 2 0 Unmodified _KTPTVIHK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.3017 2 462.287277 922.560001 87251.32 0.10861 5.0208E-05 0.25433 0.00011757 0.36294 0.00016778 462.28725989561 470.30153668359 16.262 0.33825 16.262 16.122 16.461 0 125 26 8 0 0 0 0.039925 1 3099 61.962 38.439 1 1.6279 1.4046 0 5136600 1966800 3169800 19199 1183 7244 7413 30050 30050 KTQGFILNTK 10 2 0 Unmodified _KTQGFILNTK_ 0 0 1 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.3495 2 575.334956 1148.65536 79209.38 0.43564 0.00025064 0.56958 0.0003277 1.0052 0.00057834 575.33555304917 583.349118134069 45.357 0.55052 45.357 45.04 45.591 0 134 38 5 0 0 0 0.014462 1 21697 55.806 23.935 1 1.772 1.5336 0 3751100 1539100 2212000 19200 716 7245 7414 30051 30051 KTQGFILNTK 10 2 0 Unmodified _KTQGFILNTK_ 0 0 1 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.8372 2 575.334956 1148.65536 81743.61 0.7602 0.00043737 0.27632 0.00015897 1.0365 0.00059635 575.33584241148 583.348890289841 44.986 0.48193 44.986 44.752 45.234 0 146 35 5 0 0 0 0.038647 1 20866 45.661 13.79 1 2.1668 1.8666 0 3280100 1025400 2254800 19201 716 7245 7414 30052 30052 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 1 Unmodified _KTSFDQDSDVDIFPSDFPTEPPSLPR_ 0 0 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 986.1406 3 979.797809 2936.3716 61143.07 0.4807 0.00047099 0.33772 0.0003309 0.81843 0.0008019 980.466992860542 986.139763576003 128.79 0.89207 128.79 128.42 129.31 0 140 36 8 0 0 0 0.031406 1 76923 12.638 11.484 1 1.2105 1.0361 0 2746200 1407400 1338700 19202 1679 7246 7415 30053 30053 KTTEEQVQASTPCPR 15 1 1 Unmodified _KTTEEQVQASTPCPR_ 0 0 1 Q14137;B2RDN4;A8K3R2 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.9495 3 577.949192 1730.82575 79649.94 0.18483 0.00010682 0.19912 0.00011508 0.38395 0.0002219 577.949381405706 583.956725575917 26.809 0.36504 26.809 26.615 26.98 -1.9073E-06 93 18 8 0 0 0 0.0069847 1 9711 20.389 20.389 1 1.3257 1.1423 0 2387500 1072300 1315200 19203 1726 7247 7416 30054 30054 KTVTAMDVVYALK 13 2 0 Oxidation (M) _KTVTAM(ox)DVVYALK_ KTVTAM(1)DVVYALK KTVTAM(57.17)DVVYALK 0 1 1 B2R4R0;P62805 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.9137 2 727.899802 1453.78505 73004.16 0.86874 0.00063235 -0.1761 -0.00012818 0.69264 0.00050417 727.899703516772 735.913934874758 75.249 0.51105 75.249 74.927 75.438 0 170 40 5 0 0 0 0.0036885 1 44115 57.175 42.756 1 0.84315 1.0068 0 18661000 10396000 8265200 19204 828 7248 7417 30055 30055 656 KTVTAMDVVYALK 13 2 0 Oxidation (M) _KTVTAM(ox)DVVYALK_ KTVTAM(1)DVVYALK KTVTAM(104.17)DVVYALK 0 1 1 B2R4R0;P62805 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.9132 2 727.899802 1453.78505 72346.3 0.4707 0.00034262 0.39534 0.00028776 0.86603 0.00063039 727.89989218149 735.914367581689 73.467 0.52794 73.467 73.247 73.775 0 160 44 5 0 0 0 1.5572E-05 4 44109 104.17 104.17 1 0.73459 0.8444 0 24016000 11784000 12232000 19205 828 7248 7417 30056;30057;30058;30059 30058 656 KTVTAMDVVYALK 13 2 0 Oxidation (M) _KTVTAM(ox)DVVYALK_ KTVTAM(1)DVVYALK KTVTAM(62.03)DVVYALK 0 1 1 B2R4R0;P62805 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.9163 2 727.899802 1453.78505 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.97 1 71.97 71.47 72.47 0 0 0 0 0.0020402 1 43188 62.035 23.244 1 19206 828 7248 7417 30060 30060 656 KVAPAPAVVK 10 2 0 Unmodified _KVAPAPAVVK_ 0 0 1 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 490.3187 2 490.318577 978.622602 87224.02 0.0056628 2.7766E-06 -0.027222 -1.3347E-05 -0.021559 -1.0571E-05 490.318651615757 498.332625473538 26.512 0.3695 26.512 26.324 26.694 0 66 16 6 0 0 0 0.058238 1 9556 40.882 29.242 1 0.81275 0.70685 0 2529100 1378900 1150200 19207 1648 7249 7418 30061 30061 KVDLETLK 8 2 0 Unmodified _KVDLETLK_ 0 0 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2841 2 473.2844 944.554247 88883.28 0.3449 0.00016324 0.24456 0.00011575 0.58947 0.00027899 473.284413742063 481.298670506273 39.17 0.43827 39.17 39.023 39.461 0 126 33 5 0 0 0 0.0032786 2 20220 104.2 32.855 1 0.41753 0.49296 0 46863000 28824000 18038000 19208 1991 7250 7419 30062;30063 30062 KVDVEEEFFALR 12 1 1 Unmodified _KVDVEEEFFALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2969 3 494.592675 1480.75619 88558.99 0.28292 0.00013993 0.30798 0.00015232 0.5909 0.00029225 494.5926904184 500.60029455092 99.069 0.84528 99.069 98.543 99.388 0 283 70 6 0 0 0 0.01085 1 61959 43.761 43.761 1 1.9456 2.2091 0 17793000 5085700 12707000 19209 1569 7251 7420 30064 30064 KVDVEEEFFALR 12 1 1 Unmodified _KVDVEEEFFALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.5926 3 494.592675 1480.75619 85594.73 0.54968 0.00027187 -0.015835 -7.832E-06 0.53385 0.00026404 494.592709166071 500.600135122369 111.61 0.73134 111.61 111.35 112.08 -7.6294E-06 221 42 10 0 0 0 0.00073343 2 64746 54.871 54.871 1 3.5294 3.1057 0 34822000 7859200 26963000 19210 1569 7251 7420 30065;30066 30066 KVDVEEEFFALR 12 1 1 Unmodified _KVDVEEEFFALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.3849 2 741.385374 1480.75619 71039.11 0.99769 0.00073967 -0.0066087 -4.8996E-06 0.99108 0.00073478 741.385330210326 750.396626633353 111.61 0.95496 111.61 111.35 112.3 0 185 55 8 0 0 0 0.0034407 1 64747 59.57 59.57 1 3.7515 3.2659 0 20317000 4995200 15321000 19211 1569 7251 7420 30067 30067 KVDVEEEFFALR 12 1 1 Unmodified _KVDVEEEFFALR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.6001 3 494.592675 1480.75619 85683.82 0.19074 9.434E-05 0.25013 0.00012371 0.44087 0.00021805 494.592720581291 500.600260080974 111.34 0.7843 111.34 111.07 111.85 0 209 42 10 0 0 0 0.00022417 1 63547 64.224 64.224 1 3.6907 3.1366 0 28448000 5831900 22616000 19212 1569 7251 7420 30068 30068 KVDVEEEFFALRK 13 2 1 Unmodified _KVDVEEEFFALRK_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.9701 3 537.290996 1608.85116 81076.69 0.65297 0.00035083 0.17776 9.5507E-05 0.83072 0.00044634 537.291436941079 545.969732859412 93.738 1.1452 93.738 93.412 94.557 0 369 73 9 0 0 0 0.016305 1 52253 36.445 36.445 1 3.5569 3.6848 0 21902000 4486200 17416000 19213 1569 7252 7421 30069 30069 KVDVEEEFFALRK 13 2 1 Unmodified _KVDVEEEFFALRK_ 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.9699 3 537.290996 1608.85116 80067.7 0.49073 0.00026367 0.16776 9.0134E-05 0.65849 0.0003538 537.291585592967 545.969820607862 93.391 1.2144 93.391 93.057 94.271 0 348 78 10 0 0 0 0.016988 1 51175 36.292 36.292 1 3.7012 3.6032 0 17202000 4099400 13103000 19214 1569 7252 7421 30070 30070 KVDWLTEK 8 2 0 Unmodified _KVDWLTEK_ 0 0 1 A0A024R8W0;P38919;A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3QL43;B4DNH2;J3KSZ0;E7EQG2;Q14240;J3KTN0;B4DKP9;Q9NZE6;Q96B07;B4DJX6;J3QL52 A0A024R8W0;A8K7F6 A8K7F6 DDX48;EIF4A3;EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.7823 2 509.782025 1017.5495 83732.04 0.66175 0.00033735 0.068018 3.4674E-05 0.72977 0.00037202 509.782076947351 517.796038471464 42.183 0.41042 42.183 41.984 42.395 0 138 30 6 0 0 0 0.00066879 2 22321 132.84 132.84 1 1.5927 1.8796 0 113270000 49881000 63387000 19215 770;261 7253 7422 30071;30072 30071 KVDWLTEK 8 2 0 Unmodified _KVDWLTEK_ 0 0 1 A0A024R8W0;P38919;A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3QL43;B4DNH2;J3KSZ0;E7EQG2;Q14240;J3KTN0;B4DKP9;Q9NZE6;Q96B07;B4DJX6;J3QL52 A0A024R8W0;A8K7F6 A8K7F6 DDX48;EIF4A3;EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.7958 2 509.782025 1017.5495 82388.33 0.17452 8.8965E-05 0.2887 0.00014718 0.46322 0.00023614 509.782136429796 517.796082615799 47.431 0.60122 47.431 47.146 47.747 3.8147E-06 186 43 6 0 0 0 0.028228 1 22961 60.828 41.052 1 1.5204 1.3029 0 8584400 3615800 4968600 19216 770;261 7253 7422 30073 30073 KVEAPETNIDK 11 2 0 Unmodified _KVEAPETNIDK_ 0 0 1 B4DLG2;O75152;E9PQ61;E9PBY7;Q0D2N5 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.345 2 622.330067 1242.64558 76998.98 -0.15329 -9.5398E-05 1.4698 0.00091468 1.3165 0.00081928 622.33024344957 630.344566140168 24.496 0.35339 24.496 24.314 24.668 0 52 12 7 0 0 0 4.63E-08 1 10224 121.02 93.008 1 2.269 2.7011 0 22556000 7274400 15281000 19217 996 7254 7423 30074 30074 KVEAPETNIDK 11 2 0 Unmodified _KVEAPETNIDK_ 0 0 1 B4DLG2;O75152;E9PQ61;E9PBY7;Q0D2N5 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.3445 2 622.330067 1242.64558 NaN NaN NaN -0.14723 -9.1626E-05 NaN NaN NaN NaN 27.177 0.37077 27.177 27.026 27.397 0 0 0 0 0.049391 1 10489 44.71 26.038 1 NaN NaN 0 1846300 0 1846300 19218 996 7254 7423 30075 30075 KVEAQLQELQVK 12 2 0 Unmodified _KVEAQLQELQVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.9094 2 706.909016 1411.80348 72596.83 0.73714 0.00052109 0.12051 8.5188E-05 0.85765 0.00060628 706.90892963936 714.923239018204 54.166 0.62102 54.166 53.855 54.476 0 258 50 8 0 0 0 9.259E-06 2 30382 126.21 100.09 1 1.5471 1.826 0 92165000 35392000 56773000 19219 81 7255 7424 30076;30077 30077 KVEAQLQELQVK 12 2 0 Unmodified _KVEAQLQELQVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.9092 2 706.909016 1411.80348 72581.75 0.76988 0.00054424 0.17615 0.00012452 0.94603 0.00066876 706.90907375609 714.923301198475 52.636 0.71837 52.636 52.33 53.049 -3.8147E-06 277 57 8 0 0 0 0.00093284 2 29941 74.537 52.51 1 1.7357 2.0181 0 145680000 53586000 92098000 19220 81 7255 7424 30078;30079 30079 KVEAQLQELQVK 12 2 0 Unmodified _KVEAQLQELQVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.9512 3 471.608436 1411.80348 86898.63 0.29687 0.00014001 0.4727 0.00022293 0.76957 0.00036294 471.608595370204 476.951469984058 52.636 0.55406 52.636 52.353 52.907 0 193 43 7 0 0 0 0.00045709 2 29932 60.157 46.298 1 1.6116 1.8688 0 73974000 27864000 46110000 19221 81 7255 7424 30080;30081 30080 KVEAQLQELQVK 12 2 0 Unmodified _KVEAQLQELQVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.4255 2 706.909016 1411.80348 72520.57 0.42565 0.0003009 -0.071538 -5.0571E-05 0.35411 0.00025033 706.909062512895 714.923106681642 63.345 0.72145 63.345 63.1 63.822 -3.8147E-06 281 62 7 0 0 0 0.00085889 1 32491 81.565 56.712 1 2.9351 2.5065 0 14724000 3968000 10756000 19222 81 7255 7424 30082 30082 KVEAQLQELQVK 12 2 0 Unmodified _KVEAQLQELQVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 476.951 3 471.608436 1411.80348 87378.37 -0.034226 -1.6141E-05 -0.17361 -8.1875E-05 -0.20783 -9.8016E-05 471.608214029007 476.951128227364 63.351 0.46761 63.351 63.13 63.597 0 144 41 5 0 0 0 0.0057791 1 32644 37.525 30.323 1 2.8859 2.4907 0 5003500 1240200 3763300 19223 81 7255 7424 30083 30083 KVEAQLQELQVK 12 2 0 Unmodified _KVEAQLQELQVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 476.9519 3 471.608436 1411.80348 89741.39 0.079435 3.7462E-05 -0.1273 -6.0034E-05 -0.047862 -2.2572E-05 471.608320966771 476.951131075338 63.643 0.4965 63.643 63.433 63.93 -3.8147E-06 166 47 5 0 0 0 0.005988 2 31967 36.938 33.512 1 3.0899 2.6562 0 3610300 947300 2663000 19224 81 7255 7424 30084;30085 30084 KVEAQLQELQVK 12 2 0 Unmodified _KVEAQLQELQVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.9233 2 706.909016 1411.80348 73385.04 0.36689 0.00025936 0.015977 1.1294E-05 0.38287 0.00027066 706.909049365487 714.923193456189 63.66 0.94518 63.66 63.34 64.285 3.8147E-06 355 83 8 0 0 0 0.00036613 2 32004 97.463 70.677 1 2.8531 2.4144 0 14253000 3571300 10681000 19225 81 7255 7424 30086;30087 30086 KVEDLFLTFAK 11 2 0 Unmodified _KVEDLFLTFAK_ 0 0 1 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.8865 2 655.871371 1309.72819 76618.39 0.85612 0.0005615 -0.046846 -3.0725E-05 0.80927 0.00053078 656.372737006632 663.88549088755 114.83 0.46004 114.83 114.64 115.1 0 69 21 6 0 0 0 0.0348 1 67173 43.604 43.604 1 4.0103 3.4843 0 3392300 780340 2612000 19226 523 7256 7425 30088 30088 KVEEAEPEEFVVEK 14 2 0 Unmodified _KVEEAEPEEFVVEK_ 0 0 1 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.418 2 831.417068 1660.81958 66269.52 0.64412 0.00053553 0.24972 0.00020762 0.89384 0.00074316 831.417350568143 839.431364652706 57.981 1.4979 57.981 57.475 58.973 0 930 121 10 0 0 0 5.4735E-57 4 33149 198.33 165.14 1 1.0528 1.242 0 247020000 124310000 122710000 19227 662 7257 7426 30089;30090;30091;30092 30092 KVEEAEPEEFVVEK 14 2 0 Unmodified _KVEEAEPEEFVVEK_ 0 0 1 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.9488 3 554.613804 1660.81958 80179.3 0.56725 0.00031461 0.059456 3.2975E-05 0.62671 0.00034758 554.6138592563 559.956645895126 57.934 1.3541 57.934 57.532 58.886 0 675 109 8 0 0 0 6.0336E-10 3 32649 109.07 109.07 1 1.0983 1.2959 0 175700000 84037000 91662000 19228 662 7257 7426 30093;30094;30095 30093 KVEEAEPEEFVVEK 14 2 0 Unmodified _KVEEAEPEEFVVEK_ 0 0 1 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.4174 2 831.417068 1660.81958 66249.12 0.61061 0.00050767 0.0032267 2.6827E-06 0.61384 0.00051035 831.417166201131 839.431170171054 56.246 1.2193 56.246 55.854 57.073 0 610 94 12 0 0 0 1.4187E-37 2 32265 170.56 142.35 1 1.0202 1.1916 0 449270000 217470000 231790000 19229 662 7257 7426 30096;30097 30097 KVEEAEPEEFVVEK 14 2 0 Unmodified _KVEEAEPEEFVVEK_ 0 0 1 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.9483 3 554.613804 1660.81958 80816.13 0.45695 0.00025343 0.0028847 1.5999E-06 0.45983 0.00025503 554.613801072592 559.956497432457 56.269 0.95358 56.269 56.069 57.022 0 419 72 10 0 0 0 3.4454E-22 2 32266 123.29 123.29 1 1.0568 1.2323 0 297800000 145670000 152130000 19230 662 7257 7426 30098;30099 30098 KVEEAEPEEFVVEK 14 2 0 Unmodified _KVEEAEPEEFVVEK_ 0 0 1 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 839.4315 2 831.417068 1660.81958 66618.32 0.58017 0.00048236 0.0049078 4.0804E-06 0.58508 0.00048644 831.417226784141 839.431246639086 67.277 1.5248 67.277 66.765 68.289 0 771 106 12 0 0 0 6.2269E-14 2 34874 150.22 131.47 1 1.2178 1.0276 0 149510000 68577000 80930000 19231 662 7257 7426 30100;30101 30100 KVEEAEPEEFVVEK 14 2 0 Unmodified _KVEEAEPEEFVVEK_ 0 0 1 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.6143 3 554.613804 1660.81958 80012.51 0.45982 0.00025502 0.064841 3.5961E-05 0.52466 0.00029099 554.613966400507 559.956540600385 67.263 1.0994 67.263 66.843 67.942 0 498 78 10 0 0 0 1.1051E-06 2 34968 78.191 78.191 1 1.21 1.0265 0 52839000 25059000 27780000 19232 662 7257 7426 30102;30103 30103 KVEEAEPEEFVVEK 14 2 0 Unmodified _KVEEAEPEEFVVEK_ 0 0 1 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 839.4321 2 831.417068 1660.81958 65476.83 0.54349 0.00045187 -0.194 -0.0001613 0.34949 0.00029057 831.417115240472 839.431059159831 67.668 1.3405 67.668 67.308 68.649 0 708 94 12 0 0 0 5.1923E-09 2 34355 139.48 114.09 1 1.227 1.0515 0 122940000 54655000 68285000 19233 662 7257 7426 30104;30105 30104 KVEEAEPEEFVVEK 14 2 0 Unmodified _KVEEAEPEEFVVEK_ 0 0 1 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.6142 3 554.613804 1660.81958 79722.15 0.48339 0.00026809 -0.27622 -0.00015319 0.20717 0.0001149 554.613738688568 559.956339369158 67.692 1.0576 67.692 67.308 68.366 7.6294E-06 476 75 10 0 0 0 3.0289E-05 2 34450 63.062 59.221 1 1.1993 1.0212 0 40724000 18283000 22441000 19234 662 7257 7426 30106;30107 30107 KVEEEEDESALK 12 2 0 Unmodified _KVEEEEDESALK_ 0 0 1 Q14566;Q4ZG57;B4DRF6 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.3524 2 703.338286 1404.66202 72066.53 0.80173 0.00056389 0.27322 0.00019217 1.075 0.00075605 703.338028501954 711.352700109481 21.691 0.3165 21.691 21.501 21.818 0 73 18 6 0 0 0 1.268E-23 2 7871 162.68 118.48 1 1.2216 1.4423 0 15104000 6914900 8189100 19235 1734 7258 7427 30108;30109 30108 KVEEEEDESALK 12 2 0 Unmodified _KVEEEEDESALK_ 0 0 1 Q14566;Q4ZG57;B4DRF6 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3531 2 703.338286 1404.66202 72626.21 0.58632 0.00041238 0.29709 0.00020895 0.8834 0.00062133 703.338489974884 711.352601326631 21.307 0.34529 21.307 21.146 21.491 0 47 15 5 0 0 0 3.9381E-61 2 7446 213.38 168.51 1 1.4535 1.6616 0 15893000 6058900 9833900 19236 1734 7258 7427 30110;30111 30110 KVEELQACVETAR 13 1 1 Unmodified _KVEELQACVETAR_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.9304 3 511.59609 1531.76644 85222.69 0.66672 0.00034109 -0.55387 -0.00028336 0.11285 5.7733E-05 511.930116272637 517.603378688996 45.119 0.6447 45.119 44.814 45.459 0 167 45 6 0 0 0 0.033811 2 21025 13.791 13.791 1 1.2553 1.0781 0 2553200 1280800 1272400 19237 186;1747;718 7259 7428 30112;30113 30112 KVEETQDEDDDELIFVGEISSSK 23 2 0 Unmodified _KVEETQDEDDDELIFVGEISSSK_ 0 0 1 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 876.7527 3 871.408099 2611.20247 68287.24 0.82815 0.00072166 0.21186 0.00018462 1.04 0.00090628 871.742457980314 877.085683032254 112.94 0.59363 112.94 112.74 113.34 0 73 27 5 0 0 0 0.013228 2 65805 19.538 18.597 1 2.0359 1.7617 0 3808500 1396800 2411700 19238 1924 7260 7429 30114;30115 30115 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 1 B5MD17;J3KS05;Q6IBN6;P83916;K7ELA4;C9JWS9 B5MD17 B5MD17 CBX1 Chromobox protein homolog 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.0106 3 703.675569 2108.00488 71437.44 0.75688 0.0005326 -0.049762 -3.5016E-05 0.70712 0.00049758 704.009863104124 709.352589959364 94.318 0.62105 94.318 94.12 94.741 -7.6294E-06 173 37 6 0 0 0 0.00030795 1 52822 30.428 30.428 1 0.79868 0.68223 0 14037000 6518900 7518100 19239 1081 7261 7430 30116 30116 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 1 B5MD17;J3KS05;Q6IBN6;P83916;K7ELA4;C9JWS9 B5MD17 B5MD17 CBX1 Chromobox protein homolog 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.0114 3 703.675569 2108.00488 71770.13 0.70826 0.00049839 0.32738 0.00023037 1.0356 0.00072875 704.344617511589 709.018405961038 94.188 0.85793 94.188 93.847 94.704 0 300 54 10 0 0 0 3.1618E-05 1 51920 44.089 44.089 1 0.61654 0.52145 0 12899000 6701600 6197800 19240 1081 7261 7430 30117 30117 KVELSESEEDK 11 2 0 Unmodified _KVELSESEEDK_ 0 0 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8295 2 646.814447 1291.61434 77030.75 0.65171 0.00042153 -0.087009 -5.6279E-05 0.5647 0.00036525 647.316340793806 654.828191956709 19.949 0.43891 19.949 19.785 20.224 0 28 16 4 0 0 0 0.00057427 1 6296 85.958 85.958 1 1.0346 1.1815 0 6670800 3286600 3384200 19241 570 7262 7431 30118 30118 KVEPSDPVAR 10 1 1 Unmodified _KVEPSDPVAR_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.3118 2 549.301113 1096.58767 NaN NaN NaN 0.090928 4.9947E-05 NaN NaN NaN NaN 21.123 0.29226 21.123 21.014 21.306 0 0 0 0 0.0048577 1 7425 71.349 38.509 1 NaN NaN 0 11974000 0 11974000 19242 44 7263 7432 30119 30119 KVEPSDPVAR 10 1 1 Unmodified _KVEPSDPVAR_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.3127 2 549.301113 1096.58767 NaN NaN NaN 0.57622 0.00031652 NaN NaN NaN NaN 20.821 0.37483 20.821 20.697 21.071 0 0 0 0 0.002611 1 7134 79.986 44.69 1 NaN NaN 0 8980700 0 8980700 19243 44 7263 7432 30120 30120 KVEPSDPVAR 10 1 1 Unmodified _KVEPSDPVAR_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.3015 2 549.301113 1096.58767 81385.34 0.23535 0.00012928 0.1405 7.7177E-05 0.37585 0.00020645 549.301172942476 558.312520890291 22.797 0.35888 22.797 22.62 22.979 0 57 14 5 0 0 0 0.016452 1 7492 54.191 54.191 1 1.5228 1.2757 0 6726700 2466200 4260500 19244 44 7263 7432 30121 30121 KVEPSDPVAR 10 1 1 Unmodified _KVEPSDPVAR_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.3127 2 549.301113 1096.58767 81492.41 0.27573 0.00015146 -0.71627 -0.00039345 -0.44054 -0.00024199 549.301089148555 558.312379639392 22.687 0.59756 22.687 22.527 23.125 0 59 24 6 0 0 0 0.0035463 2 6937 70.552 70.552 1 1.4795 1.2473 0 8485100 3303400 5181700 19245 44 7263 7432 30122;30123 30122 KVEPVPVTK 9 2 0 Unmodified _KVEPVPVTK_ 0 0 1 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.8076 2 498.808042 995.601532 86103.22 0.34908 0.00017412 -0.23194 -0.00011569 0.11714 5.843E-05 498.807739014371 506.822249734049 23.842 0.39717 23.842 23.707 24.104 0 54 19 5 0 0 0 0.0030746 1 9679 80.231 64.35 1 0.36711 0.42691 0 11318000 8274100 3044100 19246 197 7264 7433 30124 30124 KVEQPVIEEPALK 13 2 0 Unmodified _KVEQPVIEEPALK_ 0 0 1 Q1ED39;H3BPL4 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.2941 3 493.952091 1478.83444 87451.13 0.065886 3.2544E-05 -0.24266 -0.00011986 -0.17677 -8.7316E-05 493.951900035083 499.294529984488 58.048 0.4959 58.048 57.731 58.227 3.8147E-06 92 39 4 0 0 0 0.0092825 1 33740 27.029 27.029 1 1.5305 1.7435 0 9781900 3847400 5934500 19247 1775 7265 7434 30125 30125 KVEQPVIEEPALK 13 2 0 Unmodified _KVEQPVIEEPALK_ 0 0 1 Q1ED39;H3BPL4 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.4279 2 740.424499 1478.83444 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.773 1 57.773 57.273 58.273 3.8147E-06 0 0 0 0.012676 1 33480 62.408 44.14 1 19248 1775 7265 7434 30126 30126 KVESLQEEIAFLK 13 2 0 Unmodified _KVESLQEEIAFLK_ 0 0 1 V9HWE1;P08670;B0YJC4;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.4445 2 767.429781 1532.84501 71789.51 0.76371 0.00058609 -0.1502 -0.00011527 0.61351 0.00047083 767.429555383025 775.443747555247 97.273 1.1752 97.273 96.636 97.811 0 299 101 6 0 0 0 3.8892E-19 2 59285 161.48 127.52 1 1.5127 1.786 0 42276000 13589000 28686000 19249 1457 7266 7435 30127;30128 30128 KVESLQEEIAFLK 13 2 0 Unmodified _KVESLQEEIAFLK_ 0 0 1 V9HWE1;P08670;B0YJC4;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2916 3 511.955613 1532.84501 88670.45 0.58529 0.00029964 0.62335 0.00031913 1.2086 0.00061877 512.29043041624 517.298555210984 97.657 0.36631 97.657 97.458 97.825 0 94 30 5 0 0 0 0.0091708 1 59604 22.855 18.307 1 0.54588 0.62815 0 9179800 5767500 3412300 19250 1457 7266 7435 30129 30129 KVESLQEEIAFLK 13 2 0 Unmodified _KVESLQEEIAFLK_ 0 0 1 V9HWE1;P08670;B0YJC4;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.4445 2 767.429781 1532.84501 69547.91 1.105 0.00084802 -0.013196 -1.0127E-05 1.0918 0.00083789 767.429465130535 775.443772421554 95.494 0.79285 95.494 95.108 95.901 0 328 66 6 0 0 0 0.00022118 2 59239 75.89 45.001 1 1.5206 1.7597 0 44693000 17247000 27446000 19251 1457 7266 7435 30130;30131 30130 KVESLQEEIAFLK 13 2 0 Unmodified _KVESLQEEIAFLK_ 0 0 1 V9HWE1;P08670;B0YJC4;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.4445 2 767.429781 1532.84501 NaN NaN NaN -0.054639 -4.1932E-05 NaN NaN NaN NaN 109.08 1.0956 109.08 108.83 109.92 0 0 0 0 5.1915E-08 1 62712 105.65 86.872 1 NaN NaN 0 48281000 0 48281000 19252 1457 7266 7435 30132 30132 KVESTGAVPEFK 12 2 0 Unmodified _KVESTGAVPEFK_ 0 0 1 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.349 2 646.34826 1290.68197 78061.23 0.685 0.00044275 0.090141 5.8262E-05 0.77514 0.00050101 646.348100128145 654.362506063578 39.603 0.32368 39.603 39.428 39.752 0 108 28 6 0 0 0 0.0011327 1 20565 67.456 44.716 1 2.305 2.7369 0 25663000 8334400 17328000 19253 70 7267 7436 30133 30133 KVESTGAVPEFK 12 2 0 Unmodified _KVESTGAVPEFK_ 0 0 1 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3481 2 646.34826 1290.68197 74771.85 0.46285 0.00029917 -0.10803 -6.9826E-05 0.35482 0.00022934 646.348137550815 654.362358552001 38.139 0.32304 38.139 38.017 38.34 0 91 25 5 0 0 0 0.003459 1 19955 59.542 46.586 1 2.4524 2.8246 0 26860000 6848600 20012000 19254 70 7267 7436 30134 30134 KVETDHIVAAVGLEPNVELAK 21 2 0 Unmodified _KVETDHIVAAVGLEPNVELAK_ 0 0 1 O95831;A0A140VK04;E9PMA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.8188 4 558.811313 2231.21615 81776.77 0.56248 0.00031432 0.060214 3.3648E-05 0.6227 0.00034797 559.313137001683 562.818391208929 103.44 0.32465 103.44 103.27 103.6 0 70 19 6 0 0 0 0.052431 2 58797 7.1142 7.1142 1 1.4226 1.2479 0 2817800 1175200 1642600 19255 1431 7268 7437 30135;30136 30136 KVGLIAAR 8 1 1 Unmodified _KVGLIAAR_ 0 0 1 P62917;B4DVG7;E9PKU4;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.2764 2 414.276712 826.538872 92310.23 0.13889 5.7538E-05 -0.11048 -4.5769E-05 0.028408 1.1769E-05 414.276489033671 423.287896301445 27.81 0.33263 27.81 27.657 27.99 0 83 20 6 0 0 0 0.0089805 1 12913 90.706 47.988 1 0.65404 0.77789 0 46208000 30890000 15318000 19256 1653 7269 7438 30137 30137 KVGLIAAR 8 1 1 Unmodified _KVGLIAAR_ 0 0 1 P62917;B4DVG7;E9PKU4;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.2772 2 414.276712 826.538872 92609.81 0.62271 0.00025797 0.39812 0.00016493 1.0208 0.00042291 414.276588901721 423.288035396557 26.853 0.40531 26.853 26.588 26.994 0 64 18 5 0 0 0 0.0030972 1 12179 105.2 62.482 1 0.73001 0.85017 0 42807000 26112000 16694000 19257 1653 7269 7438 30138 30138 KVIQYLAYVASSHK 14 2 0 Unmodified _KVIQYLAYVASSHK_ 0 0 1 A0A024R1N1;P35579;Q86XU5;B4E3S1;Q5BKV1;Q9UMJ0 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.6462 3 536.303236 1605.88788 81806.76 0.5522 0.00029614 0.11328 6.0754E-05 0.66548 0.0003569 536.303925462454 541.645891916292 81.376 0.60587 81.376 81.117 81.723 0 140 37 5 0 0 0 0.0105 1 44135 27.767 27.767 1 3.0833 2.6673 0 3926300 714860 3211500 19258 81 7270 7439 30139 30139 KVMHLQDVEVK 11 2 0 Oxidation (M) _KVM(ox)HLQDVEVK_ KVM(1)HLQDVEVK KVM(43.31)HLQDVEVK 0 1 1 H7C0Q6;B4DEC5;B3KS62;Q9C037 H7C0Q6 H7C0Q6 TRIM4 E3 ubiquitin-protein ligase TRIM4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3649 2 671.363387 1340.71222 73402.39 0.88748 0.00059582 0.76267 0.00051203 1.6501 0.0011079 671.364060583252 679.377935378143 84.081 2.2731 84.081 83.246 85.519 0 989 185 8 0 0 0 0.01056 1 50202 43.308 43.308 1 2.1494 2.5346 0 550600000 178520000 372080000 19259 937 7271 7440 30140 30140 766 KVMHLQDVEVK 11 2 0 Oxidation (M) _KVM(ox)HLQDVEVK_ KVM(1)HLQDVEVK KVM(43.51)HLQDVEVK 0 1 1 H7C0Q6;B4DEC5;B3KS62;Q9C037 H7C0Q6 H7C0Q6 TRIM4 E3 ubiquitin-protein ligase TRIM4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.3787 2 671.363387 1340.71222 NaN NaN NaN 1.9785 0.0013283 NaN NaN NaN NaN 94.999 0.93869 94.999 94.597 95.535 7.6294E-06 0 0 0 0.029083 1 53146 43.512 15.114 1 NaN NaN 0 35399000 0 35399000 19260 937 7271 7440 30141 30141 766 KVMHLQDVEVK 11 2 0 Oxidation (M) _KVM(ox)HLQDVEVK_ KVM(1)HLQDVEVK KVM(42)HLQDVEVK 0 1 1 H7C0Q6;B4DEC5;B3KS62;Q9C037 H7C0Q6 H7C0Q6 TRIM4 E3 ubiquitin-protein ligase TRIM4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.3777 2 671.363387 1340.71222 NaN NaN NaN 1.5548 0.0010438 NaN NaN NaN NaN 94.776 1.0843 94.776 94.471 95.555 0 0 0 0 0.033558 1 52164 42.001 13.602 1 NaN NaN 0 33354000 0 33354000 19261 937 7271 7440 30142 30142 766 KVPGVTAIELDEDTGTFR 18 1 1 Unmodified _KVPGVTAIELDEDTGTFR_ 0 0 1 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.0134 3 650.005584 1946.99492 75320.57 1.1413 0.00074188 0.15381 9.998E-05 1.2952 0.00084186 650.005418280854 656.013265075101 91.297 0.77911 91.297 90.8 91.579 7.6294E-06 246 61 6 0 0 0 0.00013378 2 55139 43.946 43.946 1 1.0165 1.1298 0 19650000 10234000 9415700 19262 531 7272 7441 30143;30144 30144 KVPGVTAIELDEDTGTFR 18 1 1 Unmodified _KVPGVTAIELDEDTGTFR_ 0 0 1 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.0072 3 650.005584 1946.99492 75214.62 0.8583 0.0005579 0.39317 0.00025556 1.2515 0.00081346 650.340033003993 656.013177231791 89.934 0.80382 89.934 89.581 90.385 7.6294E-06 275 70 6 0 0 0 1.7267E-05 2 55485 52.298 52.298 1 1.12 1.2895 0 27451000 12317000 15134000 19263 531 7272 7441 30145;30146 30145 KVPGVTAIELDEDTGTFR 18 1 1 Unmodified _KVPGVTAIELDEDTGTFR_ 0 0 1 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.0129 3 650.005584 1946.99492 74829.73 0.41795 0.00027167 0.55369 0.0003599 0.97163 0.00063157 650.340246628669 656.013526389925 103.39 0.58089 103.39 103.16 103.74 0 238 40 10 0 0 0 0.00010518 2 57852 45.347 41.313 1 1.1719 0.99127 0 10811000 5098500 5712700 19264 531 7272 7441 30147;30148 30148 KVPPSLLCEINTNAR 15 1 1 Unmodified _KVPPSLLCEINTNAR_ 0 0 1 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.79 3 571.310173 1710.90869 81156.16 0.44654 0.00025511 0.12 6.8556E-05 0.56654 0.00032367 571.644552012506 577.318131866362 77.057 1.2068 77.057 76.442 77.649 0 425 101 6 0 0 0 0.029002 1 45505 25.558 25.558 1 0.90253 1.0035 0 19719000 8557200 11162000 19265 580 7273 7442 30149 30149 KVPPSLLCEINTNAR 15 1 1 Unmodified _KVPPSLLCEINTNAR_ 0 0 1 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3203 3 571.310173 1710.90869 80579.43 0.45467 0.00025976 0.65418 0.00037374 1.1088 0.0006335 571.6449686845 577.319216664106 74.787 0.39684 74.787 74.548 74.944 0 80 35 5 0 0 0 0.0027804 2 45069 34.666 34.666 1 1.4702 1.6886 0 25096000 9468100 15628000 19266 580 7273 7442 30150;30151 30151 KVPPSLLCEINTNAR 15 1 1 Unmodified _KVPPSLLCEINTNAR_ 0 0 1 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.3093 3 571.310173 1710.90869 78663.12 0.51722 0.00029549 -0.016303 -9.314E-06 0.50092 0.00028618 571.644467335595 577.317732856724 87.841 1.7414 87.841 87.071 88.812 0 460 105 6 0 0 0 0.0091242 2 48141 24.918 21.014 1 1.3026 1.0771 0 5529000 2259100 3269900 19267 580 7273 7442 30152;30153 30152 KVPPSLLCEINTNAR 15 1 1 Unmodified _KVPPSLLCEINTNAR_ 0 0 1 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.3173 3 571.310173 1710.90869 78696.26 0.43631 0.00024927 0.11831 6.7593E-05 0.55462 0.00031686 571.310192863956 577.317804405192 87.686 1.5613 87.686 87.014 88.575 0 419 88 6 0 0 0 0.00078472 4 47124 42.947 42.947 1 1.3398 1.1221 0 5853300 2700800 3152500 19268 580 7273 7442 30154;30155;30156;30157 30154 KVPVSVNLLSK 11 2 0 Unmodified _KVPVSVNLLSK_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.3882 2 592.374081 1182.73361 77833.59 0.42287 0.0002505 -0.56582 -0.00033518 -0.14295 -8.4682E-05 592.373606730059 600.388094987554 69.824 1.9326 69.824 69.329 71.261 0 817 163 8 0 0 0 0.0028192 2 40552 65.627 48.789 1 0.69091 0.81494 0 325270000 188080000 137200000 19269 1415 7274 7443 30158;30159 30158 KVPVSVNLLSK 11 2 0 Unmodified _KVPVSVNLLSK_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.388 2 592.374081 1182.73361 78233.05 0.53668 0.00031792 -0.053609 -3.1756E-05 0.48308 0.00028616 592.374413555955 600.387750183374 67.56 1.129 67.56 67.347 68.476 0 571 92 10 0 0 0 0.0022712 1 39995 68.132 43.256 1 0.63669 0.74515 0 748790000 420170000 328620000 19270 1415 7274 7443 30160 30160 KVPVSVNLLSK 11 2 0 Unmodified _KVPVSVNLLSK_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 395.2517 3 395.251813 1182.73361 97045.8 0.1065 4.2096E-05 -0.1256 -4.9645E-05 -0.019101 -7.5496E-06 395.251692410938 400.594465739407 67.59 0.4966 67.59 67.449 67.946 0 141 42 5 0 0 0 0.018749 1 40122 23.711 10.754 1 0.69072 0.79029 0 17796000 8800800 8994800 19271 1415 7274 7443 30161 30161 KVPVSVNLLSK 11 2 0 Unmodified _KVPVSVNLLSK_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.3884 2 592.374081 1182.73361 77814.5 0.54183 0.00032096 -0.21992 -0.00013027 0.32191 0.00019069 592.374216417947 600.387956848782 78.905 1.8862 78.905 78.608 80.494 0 654 115 11 0 0 0 0.042039 1 41460 41.399 34.249 1 0.73997 0.63572 0 186680000 111250000 75427000 19272 1415 7274 7443 30162 30162 KVQDGLSDIAEK 12 2 0 Unmodified _KVQDGLSDIAEK_ 0 0 1 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8487 2 651.848624 1301.6827 NaN NaN NaN -0.26323 -0.00017159 NaN NaN NaN NaN 38.26 0.23907 38.26 38.096 38.335 0 0 0 0 0.0011974 1 19605 81.017 45.475 1 NaN NaN 0 2944600 2944600 0 19273 672 7275 7444 30163 30163 KVQDGLSDIAEK 12 2 0 Unmodified _KVQDGLSDIAEK_ 0 0 1 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.8486 2 651.848624 1301.6827 75400.67 0.66507 0.00043353 -0.21002 -0.0001369 0.45505 0.00029662 651.848192346659 659.862770936185 43.484 0.42688 43.484 43.265 43.692 0 135 28 7 0 0 0 0.011447 2 20497 48.948 33.319 1 1.3323 1.1572 0 3416400 1514300 1902100 19274 672 7275 7444 30164;30165 30165 KVQDGLSDIAEK 12 2 0 Unmodified _KVQDGLSDIAEK_ 0 0 1 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.8631 2 651.848624 1301.6827 76156.53 0.44864 0.00029244 -0.1511 -9.8492E-05 0.29754 0.00019395 651.848630808918 659.862287739801 43.468 0.51344 43.468 43.231 43.745 0 138 33 6 0 0 0 0.00013807 2 19922 96.82 71.965 1 1.4417 1.2414 0 3345300 1307000 2038200 19275 672 7275 7444 30166;30167 30167 KVQFDGTNSAFK 12 2 0 Unmodified _KVQFDGTNSAFK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.3586 2 671.343509 1340.67246 73888.6 0.46776 0.00031403 0.098154 6.5895E-05 0.56592 0.00037992 671.343415165464 679.357550251164 45.763 0.38728 45.763 45.606 45.993 0 124 30 7 0 0 0 0.029404 1 21907 41.399 41.399 1 1.428 1.2306 0 5713000 2026500 3686500 19276 895 7276 7445 30168 30168 KVQTEVLQK 9 2 0 Unmodified _KVQTEVLQK_ 0 0 1 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.8218 2 536.821681 1071.62881 82102.1 0.70255 0.00037714 -0.089141 -4.7853E-05 0.61341 0.00032929 536.821602433781 544.8357766071 21.571 0.56377 21.571 21.33 21.893 0 124 32 6 0 0 0 7.3624E-08 2 7776 145.72 86.941 1 0.96641 1.1409 0 59643000 30467000 29176000 19277 1316 7277 7446 30169;30170 30170 KVQTEVLQK 9 2 0 Unmodified _KVQTEVLQK_ 0 0 1 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.8221 2 536.821681 1071.62881 80552.4 0.44936 0.00024123 -0.053452 -2.8694E-05 0.39591 0.00021253 536.821534531786 544.835791339794 21.1 0.34271 21.1 20.98 21.322 -1.9073E-06 94 16 8 0 0 0 2.5488E-34 2 7275 196.99 113.24 1 1.0762 1.2487 0 84628000 40511000 44117000 19278 1316 7277 7446 30171;30172 30171 KVQTEVLQK 9 2 0 Unmodified _KVQTEVLQK_ 0 0 1 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.822 2 536.821681 1071.62881 81096.41 0.35278 0.00018938 0.07198 3.864E-05 0.42476 0.00022802 536.821727897169 544.835845961387 22.954 0.45437 22.954 22.753 23.208 0 94 18 8 0 0 0 3.2402E-34 2 7557 195.88 109.05 1 0.98746 0.83852 0 43813000 22815000 20998000 19279 1316 7277 7446 30173;30174 30174 KVQTEVLQK 9 2 0 Unmodified _KVQTEVLQK_ 0 0 1 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.8217 2 536.821681 1071.62881 81803.72 0.25524 0.00013702 -0.10008 -5.3727E-05 0.15516 8.3294E-05 536.821606995192 544.835774756175 22.757 0.61517 22.757 22.595 23.21 0 103 24 10 0 0 0 7.1411E-58 2 6946 213.98 126.22 1 1.0262 0.87272 0 33202000 16570000 16631000 19280 1316 7277 7446 30175;30176 30176 KVSEMEQLK 9 2 0 Oxidation (M) _KVSEM(ox)EQLK_ KVSEM(1)EQLK KVSEM(41.45)EQLK 0 1 1 A0A087X0P0;Q02224 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.3035 2 554.289356 1106.56416 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.844 1 25.844 25.344 26.344 0 0 0 0 0.043183 1 11379 41.448 15.889 1 19281 445 7278 7447 30177 30177 314 KVSGTLDTPEK 11 2 0 Unmodified _KVSGTLDTPEK_ 0 0 1 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8333 2 587.819335 1173.62412 79110.88 0.53382 0.00031379 0.22141 0.00013015 0.75523 0.00044394 587.819197323173 595.833762550624 20.371 0.22815 20.371 20.257 20.485 0 28 7 5 0 0 0 0.041088 1 6694 41.689 24.177 1 0.80555 0.92235 0 19292000 9603800 9688100 19282 2019 7279 7448 30178 30178 KVSGTLDTPEK 11 2 0 Unmodified _KVSGTLDTPEK_ 0 0 1 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.8337 2 587.819335 1173.62412 80463.36 0.18946 0.00011137 0.20899 0.00012285 0.39845 0.00023422 587.819375418405 595.833638039928 22.059 0.52324 22.059 21.889 22.413 0 78 19 8 0 0 0 0.00039262 2 6916 91.313 66.538 1 1.4199 1.214 0 11752000 4802500 6949700 19283 2019 7279 7448 30179;30180 30179 KVSGTLDTPEK 11 2 0 Unmodified _KVSGTLDTPEK_ 0 0 1 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.8336 2 587.819335 1173.62412 78926.8 0.15866 9.3263E-05 0.51144 0.00030064 0.6701 0.0003939 587.819571396799 595.833710433566 21.876 0.53217 21.876 21.69 22.222 0 79 18 8 0 0 0 1.6384E-05 2 6328 108.9 84.682 1 1.3721 1.1573 0 8098600 3292400 4806200 19284 2019 7279 7448 30181;30182 30181 KVTEELLTDNR 11 1 1 Unmodified _KVTEELLTDNR_ 0 0 1 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.3543 2 659.354074 1316.69359 75899.71 1.0084 0.00066491 -0.33456 -0.00022059 0.67387 0.00044432 659.353683698715 668.36522983467 38.632 0.31772 38.632 38.524 38.842 0 78 26 4 0 0 0 0.0016566 3 19858 70.942 61.286 1 0.93498 1.0119 0 10323000 4528900 5794100 19285 2101 7280 7449 30183;30184;30185 30183 KVTEELLTDNR 11 1 1 Unmodified _KVTEELLTDNR_ 0 0 1 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3647 2 659.354074 1316.69359 74468.16 0.85131 0.00056131 1.0074 0.00066422 1.8587 0.0012255 659.857976055338 668.364942829853 37 0.49818 37 36.671 37.169 0 101 37 4 0 0 0 0.0080537 3 19132 57.348 44.327 1 0.81151 0.91801 0 15880000 9330000 6549800 19286 2101 7280 7449 30186;30187;30188 30187 KVTFGLNR 8 1 1 Unmodified _KVTFGLNR_ 0 0 1 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 476.788 2 467.777077 933.5396 88417.76 0.06376 2.9825E-05 0.0788 3.6861E-05 0.14256 6.6686E-05 467.777048454882 476.788172710288 40.34 0.50234 40.34 40.121 40.624 0 176 42 6 0 0 0 0.028404 1 18008 60.76 37.741 1 1.6082 1.3522 0 7302000 2986300 4315600 19287 1740 7281 7450 30189 30189 KVTGELAFDTSSADVR 16 1 1 Unmodified _KVTGELAFDTSSADVR_ 0 0 1 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.957 3 565.956453 1694.84753 82318.65 0.51123 0.00028934 0.63015 0.00035664 1.1414 0.00064597 565.956519144699 571.964276734404 72.737 0.48136 72.737 72.515 72.996 0 149 33 7 0 0 0 0.0016652 1 38425 24.3 24.3 1 1.9327 1.5987 0 3979900 1329400 2650500 19288 1887 7282 7451 30190 30190 KVTGELAFDTSSADVR 16 1 1 Unmodified _KVTGELAFDTSSADVR_ 0 0 1 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.957 3 565.956453 1694.84753 81612.65 0.42053 0.000238 0.69115 0.00039116 1.1117 0.00062917 565.956671018241 571.964150850495 73.087 0.51075 73.087 72.885 73.396 0 147 37 6 0 0 0 0.0020155 1 37815 22.54 22.54 1 1.8386 1.5554 0 3599600 1074600 2525000 19289 1887 7282 7451 30191 30191 KVTGELAFDTSSADVR 16 1 1 Unmodified _KVTGELAFDTSSADVR_ 0 0 1 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 857.4426 2 848.431041 1694.84753 NaN NaN NaN 0.013369 1.1343E-05 NaN NaN NaN NaN 73.141 0.29643 73.141 72.952 73.248 0 0 0 0 0.010397 1 37865 47.915 38.726 1 NaN NaN 0 684560 0 684560 19290 1887 7282 7451 30192 30192 KVTLGDTLTR 10 1 1 Unmodified _KVTLGDTLTR_ 0 0 1 G3V3B0;Q69YJ6;S4R3H4;E7EQT4;Q9UKV3;B4DQZ7 G3V3B0 G3V3B0 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.3364 2 552.324588 1102.63462 82217.68 0.54082 0.00029871 -0.082114 -4.5354E-05 0.45871 0.00025336 552.324571779144 561.335679180838 39.594 0.56148 39.594 39.416 39.978 0 142 47 6 0 0 0 0.0086582 2 20537 60.518 50.253 1 1.0522 1.2403 0 35081000 17909000 17172000 19291 1220 7283 7452 30193;30194 30194 KVTLGDTLTR 10 1 1 Unmodified _KVTLGDTLTR_ 0 0 1 G3V3B0;Q69YJ6;S4R3H4;E7EQT4;Q9UKV3;B4DQZ7 G3V3B0 G3V3B0 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.3359 2 552.324588 1102.63462 81387.47 0.36778 0.00020314 0.10012 5.53E-05 0.4679 0.00025844 552.324548863704 561.335721303256 38.008 0.37251 38.008 37.86 38.233 0 111 28 7 0 0 0 0.016174 1 19831 54.416 54.416 1 1.1039 1.2975 0 65977000 30617000 35361000 19292 1220 7283 7452 30195 30195 KVTLGTQPTVLR 12 1 1 Unmodified _KVTLGTQPTVLR_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.2701 3 438.269755 1311.78744 89209.57 -0.34644 -0.00015184 0.46107 0.00020207 0.11462 5.0235E-05 438.269860757249 444.27735875054 52.982 0.32489 52.982 52.773 53.097 0 117 23 6 0 0 0 0.0053558 1 29509 27.676 20.221 1 0.83754 0.98633 0 34109000 17420000 16689000 19293 1770 7284 7453 30196 30196 KVTMINAIPVASLDPIK 17 2 0 Unmodified _KVTMINAIPVASLDPIK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.6581 3 604.02174 1809.04339 77662.15 0.80105 0.00048385 -0.26663 -0.00016105 0.53441 0.0003228 604.021637317727 609.365529377887 123.27 0.61404 123.27 122.95 123.56 -7.6294E-06 121 26 8 0 0 0 0.053642 1 73702 15.984 15.984 1 0.86358 0.74141 0 7473200 4123100 3350100 19294 2148 7285 7454 30197 30197 KVTSVVFHPSQDLVFSASPDATIR 24 1 1 Unmodified _KVTSVVFHPSQDLVFSASPDATIR_ 0 0 1 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.6028 4 651.097239 2600.35985 NaN NaN NaN -0.2152 -0.00014012 NaN NaN NaN NaN 109.92 0.47517 109.92 109.68 110.15 0 0 0 0 0.039339 1 63395 18.298 15.289 1 NaN NaN 0 3607200 0 3607200 19295 2114 7286 7455 30198 30198 KVTSVVFHPSQDLVFSASPDATIR 24 1 1 Unmodified _KVTSVVFHPSQDLVFSASPDATIR_ 0 0 1 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.8533 4 651.097239 2600.35985 73851.03 0.77542 0.00050488 0.2488 0.00016199 1.0242 0.00066687 651.348559263901 655.853575793949 109.52 0.4474 109.52 109.34 109.79 7.6294E-06 108 20 8 0 0 0 0.00051795 3 62146 30.223 30.223 1 1.0537 0.88621 0 7433100 3673000 3760100 19296 2114 7286 7455 30199;30200;30201 30200 KVVEAVNSDSDSEFGIPK 18 2 0 Unmodified _KVVEAVNSDSDSEFGIPK_ 0 0 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.3328 3 640.989822 1919.94764 78771.45 0.65202 0.00041794 -0.48573 -0.00031135 0.16629 0.00010659 640.990289754771 646.331830492946 77.988 0.40315 77.988 77.808 78.211 0 77 26 5 0 0 0 0.029718 1 40964 8.3765 8.3765 1 1.728 1.4998 0 1193200 463870 729340 19297 1679 7287 7456 30202 30202 KVVESGGPEILK 12 2 0 Unmodified _KVVESGGPEILK_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.3814 2 628.366453 1254.71835 79276.78 0.62637 0.00039359 -0.29224 -0.00018364 0.33412 0.00020995 628.867983464483 636.38040369902 40.317 0.29182 40.317 40.137 40.428 0 73 25 4 0 0 0 0.00033158 1 21017 78.342 41.648 1 1.1976 1.4026 0 13015000 5714700 7300700 19298 897 7288 7457 30203 30203 KVVESGGPEILK 12 2 0 Unmodified _KVVESGGPEILK_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.3807 2 628.366453 1254.71835 77607.27 0.42423 0.00026657 0.049251 3.0948E-05 0.47348 0.00029752 628.366464857269 636.380567975682 45.739 0.49388 45.739 45.486 45.98 0 194 37 8 0 0 0 0.0036412 1 21899 59.265 33.879 1 1.3174 1.132 0 7005400 2753100 4252200 19299 897 7288 7457 30204 30204 KVVESGGPEILK 12 2 0 Unmodified _KVVESGGPEILK_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.3806 2 628.366453 1254.71835 76416.73 0.73338 0.00046083 -0.50087 -0.00031473 0.23251 0.0001461 628.366020851017 636.380376289383 45.524 0.6211 45.524 45.308 45.929 0 178 38 8 0 0 0 4.6091E-05 1 21232 100.04 73.364 1 1.3296 1.1313 0 5523000 2373400 3149600 19300 897 7288 7457 30205 30205 KVVNPLFEK 9 2 0 Unmodified _KVVNPLFEK_ 0 0 1 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.3358 2 537.321317 1072.62808 NaN NaN NaN -0.1284 -6.899E-05 NaN NaN NaN NaN 48.869 0.28138 48.869 48.612 48.894 0 0 0 0 0.018782 1 26610 60.102 33.66 1 NaN NaN 0 39037000 0 39037000 19301 1648 7289 7458 30206 30206 KVVNPLFEK 9 2 0 Unmodified _KVVNPLFEK_ 0 0 1 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.3217 2 537.321317 1072.62808 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.868 1 48.868 48.368 49.368 0 0 0 0 3.3014E-08 1 26725 125.82 63.271 1 19302 1648 7289 7458 30207 30207 KVVNPLFEK 9 2 0 Unmodified _KVVNPLFEK_ 0 0 1 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.3211 2 537.321317 1072.62808 83503.71 0.66702 0.0003584 0.10256 5.5107E-05 0.76958 0.00041351 537.321349853602 545.335446617714 46.468 0.63579 46.468 46.218 46.853 0 221 51 7 0 0 0 8.7695E-06 2 25611 132.38 79.443 1 1.1069 1.283 0 65235000 30709000 34526000 19303 1648 7289 7458 30208;30209 30209 KVYENYPTYDLTER 14 1 1 Unmodified _KVYENYPTYDLTER_ 0 0 1 B4DNW3;H0Y993;Q6MZJ9;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK;DKFZp686A24118 Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.967 3 597.624703 1789.85228 78932.27 0.28595 0.00017089 0.3151 0.00018831 0.60105 0.0003592 597.958977362467 603.632400705133 71.219 0.53447 71.219 70.956 71.49 0 140 34 5 0 0 0 0.020873 2 37553 22.475 21.613 1 0.91884 0.76324 0 3700800 1941300 1759500 19304 1546;1018 7290 7459 30210;30211 30210 KWGFTK 6 2 0 Unmodified _KWGFTK_ 0 0 1 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 383.7158 2 383.715956 765.41736 95234.5 0.48522 0.00018619 0.34641 0.00013292 0.83164 0.00031911 383.716069971422 391.730040730386 28.685 0.43446 28.685 28.525 28.96 0 77 23 5 0 0 0 0.039097 1 13594 131.3 45.389 1 0.85628 1.0107 0 85495000 44879000 40616000 19305 1524;1266 7291 7460 30212 30212 KWGVPIEK 8 2 0 Unmodified _KWGVPIEK_ 0 0 1 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7966 2 478.781828 955.549102 87666.39 0.31954 0.00015299 0.18984 9.089E-05 0.50937 0.00024388 478.781875082314 486.795948876651 44.847 0.87436 44.847 44.494 45.368 0 331 71 8 0 0 0 0.010218 2 24443 88.37 50.724 1 0.95021 1.1068 0 225820000 122510000 103310000 19306 1470 7292 7461 30213;30214 30213 KWGVPIEK 8 2 0 Unmodified _KWGVPIEK_ 0 0 1 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.7961 2 478.781828 955.549102 NaN NaN NaN -0.054891 -2.6281E-05 NaN NaN NaN NaN 52.716 1.769 52.716 52.306 54.075 0 0 0 0 0.018201 1 25378 66.692 34.221 1 NaN NaN 0 16443000 0 16443000 19307 1470 7292 7461 30215 30215 KYAPTEAQLNAVDALIDSMSLAK 23 2 0 Oxidation (M) _KYAPTEAQLNAVDALIDSM(ox)SLAK_ KYAPTEAQLNAVDALIDSM(1)SLAK KYAPTEAQLNAVDALIDSM(53.9)SLAK 0 1 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 823.0932 3 822.42459 2464.25194 66955.8 0.9823 0.00080787 -0.23231 -0.00019106 0.74999 0.00061681 823.09274154938 827.766997607959 123.58 0.5639 123.58 123.41 123.97 7.6294E-06 107 23 7 0 0 0 4.4097E-08 1 73925 53.905 51.063 1 0.16891 0.14425 0 14591000 12010000 2580900 19308 1476 7293 7462 30216 30216 1222 KYAPTEAQLNAVDALIDSMSLAK 23 2 0 Oxidation (M) _KYAPTEAQLNAVDALIDSM(ox)SLAK_ KYAPTEAQLNAVDALIDSM(1)SLAK KYAPTEAQLNAVDALIDSM(66.02)SLAK 0 1 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 822.7597 3 822.42459 2464.25194 67623.26 0.95443 0.00078495 -0.014511 -1.1935E-05 0.93992 0.00077301 822.758846915575 827.768098637043 123.45 0.52303 123.45 123.26 123.78 0 93 21 8 0 0 0 4.8316E-09 1 72858 66.017 66.017 1 0.19124 0.16153 0 10346000 8307400 2038900 19309 1476 7293 7462 30217 30217 1222 KYCQVIR 7 1 1 Unmodified _KYCQVIR_ 0 0 1 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2 P39023 P39023 RPL3;rpl3 60S ribosomal protein L3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.7741 2 483.763112 965.511671 NaN NaN NaN -0.21986 -0.00010636 NaN NaN NaN NaN 21.703 0.43553 21.703 21.571 22.007 0 0 0 0 0.045811 1 6221 60.799 44.244 1 NaN NaN 0 6879900 0 6879900 19310 1554 7294 7463 30218 30218 KYDAFLASESLIK 13 2 0 Unmodified _KYDAFLASESLIK_ 0 0 1 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.9034 2 742.903399 1483.79225 70278.96 0.86704 0.00064413 -0.14232 -0.00010573 0.72472 0.0005384 742.903264833738 750.917535338748 91.509 1.9758 91.509 91 92.975 7.6294E-06 1060 175 9 0 0 0 1.1504E-89 5 55785 238.13 238.13 1 0.93129 1.0986 0 269480000 135170000 134310000 19311 1651 7295 7464 30219;30220;30221;30222;30223 30222 KYDAFLASESLIK 13 2 0 Unmodified _KYDAFLASESLIK_ 0 0 1 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.9039 2 742.903399 1483.79225 70991.67 0.77317 0.00057439 -0.093269 -6.929E-05 0.6799 0.0005051 742.903333040055 750.917389412175 89.81 1.3923 89.81 89.387 90.779 7.6294E-06 814 118 9 0 0 0 3.7778E-13 4 55354 128.31 128.31 1 0.92904 1.085 0 438430000 222970000 215460000 19312 1651 7295 7464 30224;30225;30226;30227 30224 KYDAFLASESLIK 13 2 0 Unmodified _KYDAFLASESLIK_ 0 0 1 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.9041 2 742.903399 1483.79225 70649.89 0.70645 0.00052483 -0.065423 -4.8603E-05 0.64103 0.00047622 742.903395022929 750.917387044578 103.02 1.5265 103.02 102.54 104.07 7.6294E-06 556 99 10 0 0 0 0.00027328 3 58755 73.927 73.927 1 1.0604 0.89866 0 65114000 31903000 33211000 19313 1651 7295 7464 30228;30229;30230 30230 KYDAFLASESLIK 13 2 0 Unmodified _KYDAFLASESLIK_ 0 0 1 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.9042 2 742.903399 1483.79225 70953.8 0.4346 0.00032287 0.11952 8.8795E-05 0.55413 0.00041166 742.903387778536 750.917574698189 102.7 1.3152 102.7 102.2 103.52 0 569 90 9 0 0 0 0.00021686 2 57711 74.987 74.987 1 1.0533 0.89905 0 61913000 28918000 32995000 19314 1651 7295 7464 30231;30232 30232 KYDTVLDILR 10 1 1 Unmodified _KYDTVLDILR_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.3536 2 618.353345 1234.69214 76593.41 0.76802 0.00047491 -0.22869 -0.00014141 0.53934 0.0003335 618.353322543315 627.364572206378 98.492 2.488 98.492 97.447 99.935 -7.6294E-06 1059 205 9 0 0 0 9.5611E-10 4 60101 135.55 96.527 1 0.70782 0.85953 0 378220000 224300000 153920000 19315 1471 7296 7465 30233;30234;30235;30236 30233 KYDTVLDILR 10 1 1 Unmodified _KYDTVLDILR_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3536 2 618.353345 1234.69214 77186.27 0.69018 0.00042677 -0.21158 -0.00013083 0.4786 0.00029594 618.353211766221 627.364288118564 96.7 2.0697 96.7 95.901 97.971 0 925 170 9 0 0 0 1.8424E-51 3 60636 201.84 150.78 1 0.72404 0.86075 0 400400000 226570000 173830000 19316 1471 7296 7465 30237;30238;30239 30239 KYDTVLDILR 10 1 1 Unmodified _KYDTVLDILR_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 412.5711 3 412.571322 1234.69214 NaN NaN NaN -0.81526 -0.00033635 NaN NaN NaN NaN 96.791 0.13638 96.791 96.718 96.854 0 0 0 0 0.020753 1 60428 41.164 24.138 1 NaN NaN 0 3605300 3605300 0 19317 1471 7296 7465 30240 30240 KYDTVLDILR 10 1 1 Unmodified _KYDTVLDILR_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.3632 2 618.353345 1234.69214 75911.1 0.64802 0.0004007 -0.14469 -8.9467E-05 0.50333 0.00031124 618.353295167726 627.364354421183 109.26 1.449 109.26 108.78 110.22 0 401 72 10 0 0 0 0.043487 1 62679 44.425 31.635 1 1.3104 1.1904 0 172460000 80507000 91954000 19318 1471 7296 7465 30241 30241 KYDTVLDILR 10 1 1 Unmodified _KYDTVLDILR_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.3541 2 618.353345 1234.69214 75922.2 0.61572 0.00038073 -0.088632 -5.4806E-05 0.52709 0.00032593 618.353327298312 627.36443177766 108.84 1.4894 108.84 108.53 110.02 -7.6294E-06 356 73 9 0 0 0 3.2609E-05 1 61611 99.973 67.653 1 1.3269 1.1358 0 123930000 48177000 75748000 19319 1471 7296 7465 30242 30242 KYEDICPSTHNMDVPNIK 18 2 0 Oxidation (M) _KYEDICPSTHNM(ox)DVPNIK_ KYEDICPSTHNM(1)DVPNIK KYEDICPSTHNM(99.89)DVPNIK 0 1 1 I3L397;I3L504;P63241;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.0172 3 726.338239 2175.99289 69566.63 0.64816 0.00047079 -0.057406 -4.1696E-05 0.59076 0.00042909 726.338456180489 732.015819010599 48.963 0.53535 48.963 48.78 49.316 0 243 41 9 0 0 0 5.5578E-10 2 26745 99.891 99.891 1 4.4681 5.275 0 51216000 7368500 43847000 19320 1322 7297 7466 30243;30244 30244 1000 KYEDICPSTHNMDVPNIK 18 2 0 Oxidation (M) _KYEDICPSTHNM(ox)DVPNIK_ KYEDICPSTHNM(1)DVPNIK KYEDICPSTHNM(54.76)DVPNIK 0 1 1 I3L397;I3L504;P63241;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.0145 3 726.338239 2175.99289 70690.94 0.76979 0.00055912 -0.2993 -0.00021739 0.47048 0.00034173 726.672522263916 732.015317649823 46.827 0.51437 46.827 46.561 47.075 0 258 45 9 0 0 0 2.0822E-05 1 25832 54.764 54.764 1 5.3984 6.2413 0 34746000 6133200 28613000 19321 1322 7297 7466 30245 30245 1000 KYEEIDNAPEER 12 1 1 Unmodified _KYEEIDNAPEER_ 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.2352 3 498.235327 1491.68415 83314.04 0.27599 0.00013751 -0.0022934 -1.1427E-06 0.27369 0.00013636 498.234698420949 504.243328723604 25.257 0.45822 25.257 25.011 25.469 0 105 21 8 0 0 0 1.6078E-10 2 10849 98.167 98.167 1 1.5772 1.8943 0 69139000 26967000 42172000 19322 1580 7298 7467 30246;30247 30246 KYEEIDNAPEER 12 1 1 Unmodified _KYEEIDNAPEER_ 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.8612 2 746.849352 1491.68415 NaN NaN NaN 0.21722 0.00016223 NaN NaN NaN NaN 25.283 0.34504 25.283 25.088 25.433 0 0 0 0 1.902E-59 1 10828 184.87 154 1 NaN NaN 0 20634000 0 20634000 19323 1580 7298 7467 30248 30248 KYEEIDNAPEER 12 1 1 Unmodified _KYEEIDNAPEER_ 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.8609 2 746.849352 1491.68415 69261.55 0.4948 0.00036954 0.071233 5.3201E-05 0.56604 0.00042274 746.847975295074 755.860791822765 24.934 0.48129 24.934 24.738 25.219 0 78 19 7 0 0 0 2.4112E-37 2 10566 203.61 185.3 1 2.5121 2.9607 0 101360000 35139000 66216000 19324 1580 7298 7467 30249;30250 30250 KYEEIDNAPEER 12 1 1 Unmodified _KYEEIDNAPEER_ 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.2351 3 498.235327 1491.68415 85445.92 0.15195 7.5709E-05 -0.74232 -0.00036985 -0.59037 -0.00029414 498.234675904545 504.242056526341 24.923 0.73651 24.923 24.514 25.251 0 101 31 7 0 0 0 9.7362E-30 2 10567 148.96 141.92 1 1.6992 2.0035 0 108250000 36922000 71330000 19325 1580 7298 7467 30251;30252 30252 KYEEIDNAPEER 12 1 1 Unmodified _KYEEIDNAPEER_ 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.2358 3 498.235327 1491.68415 85282.98 0.17055 8.4973E-05 -0.020093 -1.0011E-05 0.15045 7.4962E-05 498.235297507718 504.242801074101 28.894 0.4041 28.894 28.665 29.07 -1.9073E-06 164 33 7 0 0 0 0.00054486 2 11627 45.213 45.213 1 1.2898 1.0567 0 4703600 2083300 2620300 19326 1580 7298 7467 30253;30254 30254 KYEEIDNAPEER 12 1 1 Unmodified _KYEEIDNAPEER_ 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.2426 3 498.235327 1491.68415 86959.82 -0.17666 -8.802E-05 0.16674 8.3074E-05 -0.0099259 -4.9454E-06 498.235371373632 504.242921797265 29.106 0.39295 29.106 28.912 29.305 0 105 24 7 0 0 0 0.0072314 2 11243 36.107 36.107 1 1.3261 1.1181 0 3894900 1590700 2304200 19327 1580 7298 7467 30255;30256 30255 KYEEIDNAPEER 12 1 1 Unmodified _KYEEIDNAPEER_ 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 747.3499 2 746.849352 1491.68415 71243.8 0.19615 0.00014649 -0.010401 -7.7677E-06 0.18575 0.00013873 746.84939905217 755.860614839731 29.104 0.35995 29.104 28.93 29.29 0 103 22 6 0 0 0 0.060041 1 11251 34.96 34.96 1 1.1655 0.98639 0 3563400 1456600 2106800 19328 1580 7298 7467 30257 30257 KYELGRPAANTK 12 2 1 Unmodified _KYELGRPAANTK_ 0 0 2 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.9174 3 449.917493 1346.73065 89499.6 -0.087165 -3.9217E-05 0.26257 0.00011814 0.17541 7.8919E-05 449.917530297975 458.596518192546 19.546 0.35052 19.546 19.364 19.715 0 86 16 6 0 0 0 0.011671 1 5956 45.28 29.908 1 0.61704 0.79582 0 20762000 12199000 8563000 19329 1635 7299 7468 30258 30258 KYEPPVPTR 9 1 1 Unmodified _KYEPPVPTR_ 0 0 1 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.8122 2 543.800749 1085.58694 81347.45 0.91805 0.00049924 0.20609 0.00011207 1.1241 0.00061131 543.80118256009 552.811932570217 28.69 0.31001 28.69 28.54 28.85 0 69 16 6 0 0 0 0.03609 1 13689 49.418 49.418 1 2.6838 3.1646 0 35460000 9025300 26435000 19330 1634 7300 7469 30259 30259 KYEPPVPTR 9 1 1 Unmodified _KYEPPVPTR_ 0 0 1 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.8009 2 543.800749 1085.58694 83784.51 0.38283 0.00020818 -0.089112 -4.8459E-05 0.29371 0.00015972 543.800670162278 552.812190972956 27.802 0.36665 27.802 27.628 27.995 0 92 20 7 0 0 0 0.0067758 2 13074 70.256 60.668 1 2.2062 2.539 0 26985000 8625400 18360000 19331 1634 7300 7469 30260;30261 30261 KYEQGFITDPVVLSPK 16 2 0 Unmodified _KYEQGFITDPVVLSPK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.0076 3 607.66461 1819.972 76997.87 0.70588 0.00042894 0.0042337 2.5726E-06 0.71011 0.00043151 607.664494322912 613.007355764288 92.811 1.2871 92.811 92.284 93.571 0 646 114 7 0 0 0 2.0419E-05 2 56072 81.01 81.01 1 1.2129 1.4321 0 45825000 22521000 23305000 19332 1282 7301 7470 30262;30263 30262 KYEQGFITDPVVLSPK 16 2 0 Unmodified _KYEQGFITDPVVLSPK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 919.0085 2 910.993277 1819.972 NaN NaN NaN 0.92547 0.0008431 NaN NaN NaN NaN 92.464 0.11589 92.464 92.416 92.532 0 0 0 0 0.013942 1 56039 43.991 37.888 1 NaN NaN 0 4901100 0 4901100 19333 1282 7301 7470 30264 30264 KYEQGFITDPVVLSPK 16 2 0 Unmodified _KYEQGFITDPVVLSPK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 919.0067 2 910.993277 1819.972 NaN NaN NaN -0.7575 -0.00069008 NaN NaN NaN NaN 92.966 0.44312 92.966 92.82 93.263 -7.6294E-06 0 0 0 0.01674 1 56419 42.209 34.298 1 NaN NaN 0 11527000 0 11527000 19334 1282 7301 7470 30265 30265 KYEQGFITDPVVLSPK 16 2 0 Unmodified _KYEQGFITDPVVLSPK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 910.9931 2 910.993277 1819.972 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.721 1 92.721 92.221 93.221 0 0 0 0 0.0034332 1 56195 69.878 47.885 1 19335 1282 7301 7470 30266 30266 KYEQGFITDPVVLSPK 16 2 0 Unmodified _KYEQGFITDPVVLSPK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.664 3 607.66461 1819.972 76338.27 0.62647 0.00038068 0.13567 8.2442E-05 0.76214 0.00046312 607.999140934349 613.007548503971 91.422 1.0029 91.422 90.862 91.865 7.6294E-06 497 87 10 0 0 0 9.163E-05 2 56384 52.172 52.172 1 1.2326 1.4298 0 80473000 41029000 39444000 19336 1282 7301 7470 30267;30268 30268 KYEQGFITDPVVLSPK 16 2 0 Unmodified _KYEQGFITDPVVLSPK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.0075 2 910.993277 1819.972 64979.08 0.66894 0.0006094 0.27387 0.00024949 0.9428 0.00085889 911.494834666529 919.00772517321 91.256 0.72926 91.256 90.958 91.688 7.6294E-06 262 63 6 0 0 0 0.00026043 3 56371 93.243 93.243 1 1.0839 1.2483 0 26820000 11640000 15180000 19337 1282 7301 7470 30269;30270;30271 30270 KYEQGFITDPVVLSPK 16 2 0 Unmodified _KYEQGFITDPVVLSPK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.0076 3 607.66461 1819.972 77295.96 0.50144 0.00030471 0.088951 5.4052E-05 0.59039 0.00035876 607.999127338809 613.007515178837 104.88 0.61168 104.88 104.59 105.2 0 230 34 9 0 0 0 0.0022231 1 59673 34.202 34.202 1 1.2353 1.0564 0 11197000 5444900 5752000 19338 1282 7301 7470 30272 30272 KYEQGFITDPVVLSPK 16 2 0 Unmodified _KYEQGFITDPVVLSPK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.665 3 607.66461 1819.972 77874.43 0.39153 0.00023792 0.050156 3.0478E-05 0.44168 0.0002684 607.664833959861 613.007394307096 104.47 0.75569 104.47 104.2 104.96 0 220 43 8 0 0 0 0.0021926 2 58673 34.262 34.262 1 1.3627 1.1501 0 9048100 3799000 5249100 19339 1282 7301 7470 30273;30274 30274 KYETVIMPVFGIATPFHIATIK 22 2 0 Oxidation (M) _KYETVIM(ox)PVFGIATPFHIATIK_ KYETVIM(1)PVFGIATPFHIATIK KYETVIM(129.9)PVFGIATPFHIATIK 0 1 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.1376 3 831.458906 2491.35489 67215.95 0.86069 0.00071563 0.38918 0.00032359 1.2499 0.0010392 831.793423686289 837.136268198423 131.49 0.78996 131.49 131.22 132.01 0 376 52 11 0 0 0 1.8644E-29 2 85854 129.9 129.9 1 1.0476 1.2369 0 40150000 20012000 20138000 19340 2148 7302 7471 30275;30276 30276 1993 KYETVIMPVFGIATPFHIATIK 22 2 0 Oxidation (M) _KYETVIM(ox)PVFGIATPFHIATIK_ KYETVIM(1)PVFGIATPFHIATIK KYETVIM(126.26)PVFGIATPFHIATIK 0 1 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.7943 3 831.458906 2491.35489 67123.23 1.2383 0.0010296 -0.15161 -0.00012606 1.0866 0.0009035 831.792984452151 837.135756613398 131.38 0.78566 131.38 131.1 131.88 0 452 59 10 0 0 0 2.7071E-29 2 87849 126.26 126.26 1 1.056 1.2228 0 51663000 24276000 27387000 19341 2148 7302 7471 30277;30278 30277 1993 KYETVIMPVFGIATPFHIATIK 22 2 0 Oxidation (M) _KYETVIM(ox)PVFGIATPFHIATIK_ KYETVIM(1)PVFGIATPFHIATIK KYETVIM(42.45)PVFGIATPFHIATIK 0 1 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.7938 3 831.458906 2491.35489 66389.21 0.71237 0.00059231 0.31356 0.00026071 1.0259 0.00085302 831.793538900348 837.136356844926 129.52 0.85583 129.52 129.3 130.15 0 271 39 12 0 0 0 1.5002E-05 1 78333 42.454 42.454 1 0.60137 0.51124 0 35298000 21405000 13893000 19342 2148 7302 7471 30279 30279 1993 KYETVIMPVFGIATPFHIATIK 22 2 0 Oxidation (M) _KYETVIM(ox)PVFGIATPFHIATIK_ KYETVIM(1)PVFGIATPFHIATIK KYETVIM(53.27)PVFGIATPFHIATIK 0 1 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.0974 4 623.845999 2491.35489 76537.95 0.68155 0.00042518 0.36573 0.00022816 1.0473 0.00065334 624.096886378749 627.85339798106 129.54 0.45331 129.54 129.34 129.79 0 118 19 10 0 0 0 1.085E-07 1 78375 53.266 53.266 1 0.57366 0.49796 0 3453800 2307800 1146000 19343 2148 7302 7471 30280 30280 1993 KYETVIMPVFGIATPFHIATIK 22 2 0 Oxidation (M) _KYETVIM(ox)PVFGIATPFHIATIK_ KYETVIM(1)PVFGIATPFHIATIK KYETVIM(54.94)PVFGIATPFHIATIK 0 1 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.7943 3 831.458906 2491.35489 66718.14 1.025 0.00085228 0.018023 1.4986E-05 1.0431 0.00086727 831.793261216195 837.136032685105 129.33 0.60355 129.33 129.12 129.72 0 258 26 13 0 0 0 1.6894E-07 2 77253 54.943 54.943 1 0.59791 0.50998 0 54458000 34633000 19825000 19344 2148 7302 7471 30281;30282 30281 1993 KYETVIMPVFGIATPFHIATIK 22 2 0 Oxidation (M) _KYETVIM(ox)PVFGIATPFHIATIK_ KYETVIM(1)PVFGIATPFHIATIK KYETVIM(76.89)PVFGIATPFHIATIK 0 1 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.0984 4 623.845999 2491.35489 76010.12 0.89594 0.00055893 0.11836 7.3837E-05 1.0143 0.00063277 624.096896259783 628.354464970889 129.3 0.3748 129.3 129.14 129.52 0 92 17 8 0 0 0 2.5164E-09 1 77351 76.889 76.889 1 0.66491 0.56475 0 5910200 3385000 2525300 19345 2148 7302 7471 30283 30283 1993 KYETVIMPVFGIATPFHIATIK 22 2 0 Unmodified _KYETVIMPVFGIATPFHIATIK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 826.4636 3 826.127268 2475.35997 66380.77 1.2975 0.0010719 0.54431 0.00044967 1.8418 0.0015216 826.461858552031 831.805255328421 134.39 0.17265 134.39 134.3 134.48 0 63 7 12 0 0 0 1.4836E-22 2 82036 119.34 119.34 1 1.0127 0.85889 0 56076000 30415000 25661000 19346 2148 7302 7472 30284;30285 30285 KYETVIMPVFGIATPFHIATIK 22 2 0 Unmodified _KYETVIMPVFGIATPFHIATIK_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.8052 3 826.127268 2475.35997 65663.5 0.9791 0.00080886 -0.12189 -0.0001007 0.85721 0.00070816 826.461296820948 831.804730208336 134.34 0.20311 134.34 134.24 134.44 0 63 8 12 0 0 0 2.9181E-09 2 81087 78.428 78.428 1 1.1117 0.9478 0 50790000 23266000 27524000 19347 2148 7302 7472 30286;30287 30286 KYETVQDILK 10 2 0 Unmodified _KYETVQDILK_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6;H7BZ82 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.8456 2 618.845353 1235.67615 NaN NaN NaN 0.93157 0.00057649 NaN NaN NaN NaN 64.488 1.1042 64.488 63.897 65.001 0 0 0 0 0.0015464 1 37162 97.813 48.098 1 NaN NaN 0 19006000 19006000 0 19348 1679 7303 7473 30288 30288 KYETVQDILK 10 2 0 Unmodified _KYETVQDILK_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6;H7BZ82 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8596 2 618.845353 1235.67615 76362.06 0.3797 0.00023498 0.30505 0.00018878 0.68475 0.00042375 618.845450762164 626.859726404354 61.995 1.2615 61.995 61.632 62.893 -3.8147E-06 345 117 6 0 0 0 0.0022987 2 36264 73.951 29.748 1 0.4285 0.49556 0 37648000 26412000 11236000 19349 1679 7303 7473 30289;30290 30290 KYETVQDILK 10 2 0 Unmodified _KYETVQDILK_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6;H7BZ82 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8456 2 618.845353 1235.67615 NaN NaN NaN 0.28051 0.00017359 NaN NaN NaN NaN 73.119 1.0225 73.119 72.751 73.773 0 0 0 0 0.023684 1 38733 66.603 26.545 1 NaN NaN 0 7558100 7558100 0 19350 1679 7303 7473 30291 30291 KYETVQDILK 10 2 0 Unmodified _KYETVQDILK_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6;H7BZ82 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.8148 2 618.845353 1235.67615 77720.93 0.48189 0.00029821 0.087803 5.4337E-05 0.56969 0.00035255 618.845183138323 626.859602761506 73.325 1.0074 73.325 72.952 73.959 0 307 71 7 0 0 0 0.018031 1 38073 68.786 36.035 1 0.88897 0.75148 0 11853000 5794400 6058300 19351 1679 7303 7473 30292 30292 KYEVADVGIEVK 12 2 0 Unmodified _KYEVADVGIEVK_ 0 0 1 Q2TB10;B7Z4V7 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 683.384 2 675.369192 1348.72383 74601.59 0.61563 0.00041578 0.018649 1.2595E-05 0.63428 0.00042838 675.369340395075 683.383252258954 75.446 0.55229 75.446 75.171 75.723 0 200 39 8 0 0 0 3.3264E-05 1 40136 103.46 84.191 1 1.7173 1.4691 0 10564000 4354300 6209800 19352 1777 7304 7474 30293 30293 KYEVADVGIEVK 12 2 0 Unmodified _KYEVADVGIEVK_ 0 0 1 Q2TB10;B7Z4V7 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.3835 2 675.369192 1348.72383 74529.53 0.47134 0.00031833 0.039797 2.6877E-05 0.51114 0.00034521 675.369303214471 683.383318564219 75.63 0.56751 75.63 75.4 75.968 0 208 41 9 0 0 0 0.00022539 2 39371 93.766 72.302 1 1.6232 1.3691 0 8149200 3106400 5042800 19353 1777 7304 7474 30294;30295 30295 KYNPDSGLEVLAVQR 15 1 1 Unmodified _KYNPDSGLEVLAVQR_ 0 0 1 B4DIS6;Q9H6R0;I3L1L6;Q9NPV4 B4DIS6 B4DIS6 DHX33;DKFZp762F2011 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.6448 3 563.637054 1687.88933 80989.91 0.6425 0.00036214 -0.069849 -3.937E-05 0.57265 0.00032277 563.6368604799 569.644441013913 88.064 0.46671 88.064 87.87 88.337 0 139 28 7 0 0 0 0.00015765 2 48514 53.403 47.744 1 1.5653 1.3122 0 3364700 1137600 2227100 19354 983 7305 7475 30296;30297 30296 KYNPDSGLEVLAVQR 15 1 1 Unmodified _KYNPDSGLEVLAVQR_ 0 0 1 B4DIS6;Q9H6R0;I3L1L6;Q9NPV4 B4DIS6 B4DIS6 DHX33;DKFZp762F2011 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.6366 3 563.637054 1687.88933 81140.38 0.49257 0.00027763 -0.094621 -5.3332E-05 0.39795 0.0002243 563.637051383627 569.644480317814 87.948 0.427 87.948 87.756 88.183 0 100 26 5 0 0 0 0.0012191 2 47616 29.341 25.169 1 1.3871 1.1845 0 2886300 1164400 1721900 19355 983 7305 7475 30298;30299 30298 KYQEQLVQEQELAK 14 2 0 Unmodified _KYQEQLVQEQELAK_ 0 0 1 P42695;Q96FA6;E9PQA3 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 875.9015 2 867.457059 1732.89956 66254.13 0.30173 0.00026174 0.10693 9.2755E-05 0.40865 0.00035449 867.457285812436 875.471179918888 56.161 0.56722 56.161 55.914 56.481 0 210 38 8 0 0 0 0.029607 1 27715 35.523 35.523 1 1.9278 1.6537 0 3960700 1332600 2628200 19356 1565 7306 7476 30300 30300 KYSLPSK 7 2 0 Unmodified _KYSLPSK_ 0 0 1 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.7537 2 411.739628 821.464704 NaN NaN NaN 0.027126 1.1169E-05 NaN NaN NaN NaN 21.775 0.37627 21.775 21.626 22.002 0 0 0 0 0.039289 1 7961 63.961 17.59 1 NaN NaN 0 37972000 0 37972000 19357 2103 7307 7477 30301 30301 KYVIYIER 8 1 1 Unmodified _KYVIYIER_ 0 0 1 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.327 2 542.313492 1082.61243 NaN NaN NaN 0.37042 0.00020088 NaN NaN NaN NaN 50.04 0.39846 50.04 49.794 50.193 0 0 0 0 0.047994 1 28166 51.066 22.554 1 NaN NaN 0 8288000 0 8288000 19358 1629;1214 7308 7478 30302 30302 KYVTDIQPSEQNESNINK 18 2 0 Unmodified _KYVTDIQPSEQNESNINK_ 0 0 1 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.3573 3 703.014919 2106.02293 72498.88 0.44419 0.00031227 -0.043702 -3.0723E-05 0.40049 0.00028155 703.348331740299 708.357510308641 47.333 0.43102 47.333 47.131 47.562 0 153 32 7 0 0 0 0.046121 1 22870 11.657 11.657 1 1.9757 1.7667 0 1859500 588910 1270600 19359 1795 7309 7479 30303 30303 KYVTDIQPSEQNESNINK 18 2 0 Unmodified _KYVTDIQPSEQNESNINK_ 0 0 1 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.3596 3 703.014919 2106.02293 72191.8 0.2384 0.0001676 0.41572 0.00029225 0.65411 0.00045985 703.349253305003 708.69238254419 47.628 0.37686 47.628 47.422 47.799 -3.8147E-06 96 26 7 0 0 0 0.016302 2 22507 20.596 18.818 1 2.0134 1.7597 0 1458800 510180 948590 19360 1795 7309 7479 30304;30305 30304 LAAAILGGVDQIHIK 15 1 0 Unmodified _LAAAILGGVDQIHIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.6433 3 506.971597 1517.89296 84003.17 0.64517 0.00032708 -0.12707 -6.4422E-05 0.5181 0.00026266 506.971620852734 509.642855620582 99.988 1.4143 99.988 99.559 100.97 0 778 114 10 0 0 0 0.00012284 4 61086 58.32 58.32 1 0.7547 0.89666 0 552850000 305910000 246940000 19361 1506;683 7310 7480 30306;30307;30308;30309 30306 LAAAILGGVDQIHIK 15 1 0 Unmodified _LAAAILGGVDQIHIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.4628 2 759.953758 1517.89296 70447.82 0.81416 0.00061873 0.24049 0.00018276 1.0547 0.00080149 759.953976880025 763.960950177571 99.995 0.9458 99.995 99.654 100.6 0 400 81 7 0 0 0 0.0043407 2 61153 54.343 54.343 1 0.78612 0.88659 0 131050000 69388000 61667000 19362 1506;683 7310 7480 30310;30311 30310 LAAAILGGVDQIHIK 15 1 0 Unmodified _LAAAILGGVDQIHIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.9715 3 506.971597 1517.89296 84195.95 0.43749 0.00022179 -0.10277 -5.2104E-05 0.33471 0.00016969 506.971683003842 509.642853969339 99.131 1.3638 99.131 98.58 99.944 -7.6294E-06 714 110 11 0 0 0 6.7425E-05 3 61811 62.287 62.287 1 0.74287 0.87508 0 529050000 308170000 220890000 19363 1506;683 7310 7480 30312;30313;30314 30313 LAAAILGGVDQIHIK 15 1 0 Unmodified _LAAAILGGVDQIHIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.9556 2 759.953758 1517.89296 70126 0.67152 0.00051033 0.27573 0.00020954 0.94725 0.00071987 759.954100932315 763.960901960589 99.224 0.78825 99.224 98.678 99.466 0 376 67 8 0 0 0 0.00022626 2 61930 90.913 90.913 1 0.7959 0.89264 0 113790000 67918000 45870000 19364 1506;683 7310 7480 30315;30316 30316 LAAAILGGVDQIHIK 15 1 0 Unmodified _LAAAILGGVDQIHIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.6429 3 506.971597 1517.89296 83703.27 0.6972 0.00035346 -0.29714 -0.00015064 0.40007 0.00020282 506.971588490444 509.642747485423 112.19 0.84103 112.19 111.92 112.76 7.6294E-06 317 47 10 0 0 0 0.00019508 2 65022 53.3 53.3 1 0.9765 0.84293 0 104500000 54251000 50250000 19365 1506;683 7310 7480 30317;30318 30318 LAAAILGGVDQIHIK 15 1 0 Unmodified _LAAAILGGVDQIHIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.9616 2 759.953758 1517.89296 69837.48 0.92179 0.00070052 0.091145 6.9266E-05 1.0129 0.00076978 759.953791315169 763.960740032072 112.2 0.63524 112.2 111.97 112.61 0 237 36 10 0 0 0 0.00044553 2 65031 73.781 73.781 1 1.0948 0.90219 0 41057000 20181000 20876000 19366 1506;683 7310 7480 30319;30320 30319 LAAAILGGVDQIHIK 15 1 0 Unmodified _LAAAILGGVDQIHIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.6427 3 506.971597 1517.89296 84454.18 0.43994 0.00022304 -0.063291 -3.2087E-05 0.37665 0.00019095 506.971704935538 509.642890365986 111.86 1.1735 111.86 111.65 112.83 7.6294E-06 349 62 10 0 0 0 4.9393E-05 2 63896 78.814 78.814 1 0.93288 0.79727 0 108270000 53392000 54873000 19367 1506;683 7310 7480 30321;30322 30322 LAAAILGGVDQIHIK 15 1 0 Unmodified _LAAAILGGVDQIHIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.9544 2 759.953758 1517.89296 70580.71 0.7118 0.00054094 0.22822 0.00017344 0.94002 0.00071437 759.954062302411 763.960847590109 111.87 0.66418 111.87 111.68 112.35 7.6294E-06 208 35 8 0 0 0 0.0002201 2 63913 80.979 80.979 1 1.0129 0.85251 0 52031000 26511000 25520000 19368 1506;683 7310 7480 30323;30324 30324 LAAAILGGVDQIHIKPGAK 19 2 0 Unmodified _LAAAILGGVDQIHIKPGAK_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.0497 3 624.707032 1871.09927 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.956 1 86.956 86.456 87.456 7.6294E-06 0 0 0 0.0033288 1 53591 45.883 35.602 1 19369 1506 7311 7481 30325 30325 LAAAILGGVDQIHIKPGAK 19 2 0 Unmodified _LAAAILGGVDQIHIKPGAK_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.3862 3 624.707032 1871.09927 76033.83 0.41566 0.00025967 0.45046 0.00028141 0.86613 0.00054108 625.041595558687 630.050090053759 100.14 0.74822 100.14 99.875 100.62 0 416 61 10 0 0 0 6.1634E-05 2 56570 47.64 47.64 1 0.98927 0.83804 0 69871000 33576000 36294000 19370 1506 7311 7481 30326;30327 30326 LAAAILGGVDQIHIKPGAK 19 2 0 Unmodified _LAAAILGGVDQIHIKPGAK_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.0497 3 624.707032 1871.09927 80360.98 0.38546 0.0002408 0.5314 0.00033197 0.91686 0.00057277 624.707088914903 630.384748202208 100.9 0.285 100.9 100.74 101.03 -7.6294E-06 43 18 4 0 0 0 0.005048 1 57093 25.158 25.158 1 0.91712 0.8192 0 1973400 767880 1205500 19371 1506 7311 7481 30328 30328 LAAAILGGVDQIHIKPGAK 19 2 0 Unmodified _LAAAILGGVDQIHIKPGAK_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.7173 3 624.707032 1871.09927 75731.28 0.4615 0.0002883 0.19784 0.00012359 0.65933 0.00041189 624.707071667631 630.049893963465 99.737 0.7142 99.737 99.48 100.19 0 372 65 8 0 0 0 2.4462E-06 2 55476 79.97 79.97 1 0.99166 0.84551 0 51123000 24845000 26278000 19372 1506 7311 7481 30329;30330 30329 LAAAILGGVDQIHIKPGAK 19 2 0 Unmodified _LAAAILGGVDQIHIKPGAK_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.7183 3 624.707032 1871.09927 NaN NaN NaN 0.9971 0.00062289 NaN NaN NaN NaN 100.11 0.089706 100.11 100.08 100.17 0 0 0 0 0.018159 1 55753 37.157 24.602 1 NaN NaN 0 2069700 0 2069700 19373 1506 7311 7481 30331 30331 LAAAVFSLAIK 11 1 0 Unmodified _LAAAVFSLAIK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.3522 2 552.344792 1102.67503 NaN NaN NaN -0.44571 -0.00024618 NaN NaN NaN NaN 110.99 0.4863 110.99 110.76 111.24 0 0 0 0 0.0017076 1 69705 81.338 49.403 1 NaN NaN 0 5781300 0 5781300 19374 1920 7312 7482 30332 30332 LAAAVFSLAIK 11 1 0 Unmodified _LAAAVFSLAIK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.3445 2 552.344792 1102.67503 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.97 1 110.97 110.47 111.47 0 0 0 0 2.5334E-09 1 69780 118.18 60.618 1 19375 1920 7312 7482 30333 30333 LAAAVFSLAIK 11 1 0 Unmodified _LAAAVFSLAIK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.345 2 552.344792 1102.67503 84876.75 0.61636 0.00034045 -0.18091 -9.9927E-05 0.43545 0.00024052 552.344835006188 556.351683684645 110.35 0.52945 110.35 110.08 110.61 -7.6294E-06 104 36 4 0 0 0 1.8777E-05 2 70958 105.4 93.111 1 2.0575 2.1524 0 10381000 2884300 7497000 19376 1920 7312 7482 30334;30335 30335 LAAAVFSLAIK 11 1 0 Unmodified _LAAAVFSLAIK_ 0 0 0 Q8NBU5;B4E2J1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.3532 2 552.344792 1102.67503 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.05 1 122.05 121.55 122.55 0 0 0 0 0.039138 1 71835 44.863 20.709 1 19377 1920 7312 7482 30336 30336 LAADDFR 7 0 1 Unmodified _LAADDFR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__Q92764;C4AM86;CON__Q497I4;A0A024R1T2;Q92764;CON__Q14532;CON__A2AB72;CON__O76015;CON__O76013;O76015;O76013;CON__P05784;CON__P02533;P02533;CON__Q6IFX2;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q04695;Q04695;F5GWP8;K7EPJ9;B4E2P9;B4DE59;CON__P08779;P08779;B4DWU0;B4E2J5;CON__P13645;P13645;CON__P02535-1;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q14525;Q14525;Q6A165;CON__Q9UE12;CON__Q15323;CON__A2A5Y0;CON__O76014;CON__REFSEQ:XP_986630;Q15323;Q14532;O76014 F8VZY9;CON__P05784;CON__P02533;CON__Q04695;B4DE59;CON__P08779;CON__P13645;CON__Q14525 CON__P13645 KRT18;KRT35;KRTHA5;KRT38;KRT36;KRT14;KRT17;KRT16;KRT10;KRT28;KRT33B;KRTHA7;KRT31;KRT32;KRT37 Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5;Keratin, type I cuticular Ha8;Keratin, type I cuticular Ha6;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha2;Keratin, type I cuticular Ha7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 404.2034 2 404.20341 806.392267 93000.45 0.098245 3.9711E-05 -0.11503 -4.6494E-05 -0.01678 -6.7826E-06 404.203356192424 409.207402789213 37.755 2.0374 37.755 37.17 39.207 3.8147E-06 710 169 8 0 0 0 0.027069 1 19580 86.866 47.105 1 0.40535 0.48093 0 684980000 475990000 208980000 + 19378 1161;316;1150;1159;1168;1155;964;1169 7313 7483 30337 30337 LAADDFR 7 0 1 Unmodified _LAADDFR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__Q92764;C4AM86;CON__Q497I4;A0A024R1T2;Q92764;CON__Q14532;CON__A2AB72;CON__O76015;CON__O76013;O76015;O76013;CON__P05784;CON__P02533;P02533;CON__Q6IFX2;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q04695;Q04695;F5GWP8;K7EPJ9;B4E2P9;B4DE59;CON__P08779;P08779;B4DWU0;B4E2J5;CON__P13645;P13645;CON__P02535-1;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q14525;Q14525;Q6A165;CON__Q9UE12;CON__Q15323;CON__A2A5Y0;CON__O76014;CON__REFSEQ:XP_986630;Q15323;Q14532;O76014 F8VZY9;CON__P05784;CON__P02533;CON__Q04695;B4DE59;CON__P08779;CON__P13645;CON__Q14525 CON__P13645 KRT18;KRT35;KRTHA5;KRT38;KRT36;KRT14;KRT17;KRT16;KRT10;KRT28;KRT33B;KRTHA7;KRT31;KRT32;KRT37 Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5;Keratin, type I cuticular Ha8;Keratin, type I cuticular Ha6;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha2;Keratin, type I cuticular Ha7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 404.2033 2 404.20341 806.392267 92641.79 0.17103 6.913E-05 -0.028962 -1.1707E-05 0.14207 5.7423E-05 404.203378089533 409.207484190861 36.862 1.9719 36.862 36.231 38.203 0 699 156 8 0 0 0 0.029075 1 19324 70.912 36.02 1 0.3994 0.47005 0 1026400000 713780000 312620000 + 19379 1161;316;1150;1159;1168;1155;964;1169 7313 7483 30338 30338 LAADFSVPLIIDIK 14 1 0 Unmodified _LAADFSVPLIIDIK_ 0 0 0 Q53SY7;F8VPD4;P27708;H7C3Z5 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.9538 2 757.945067 1513.87558 70480.02 0.84638 0.00064151 0.22444 0.00017011 1.0708 0.00081162 757.945039435784 761.952466363334 132.47 0.60152 132.47 132.19 132.79 0 200 39 6 0 0 0 3.6418E-06 2 86463 101.93 101.93 1 0.8009 0.79075 0 9314200 5366000 3948200 19380 1259 7314 7484 30339;30340 30340 LAADFSVPLIIDIK 14 1 0 Unmodified _LAADFSVPLIIDIK_ 0 0 0 Q53SY7;F8VPD4;P27708;H7C3Z5 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.4545 2 757.945067 1513.87558 NaN NaN NaN 0.24707 0.00018727 NaN NaN NaN NaN 132.07 0.5567 132.07 131.77 132.33 0 0 0 0 0.00027573 1 88312 82.171 64.307 1 NaN NaN 0 5659400 0 5659400 19381 1259 7314 7484 30341 30341 LAAEATEWQR 10 0 1 Unmodified _LAAEATEWQR_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8005 2 587.796195 1173.57784 81675.15 0.58458 0.00034361 -0.16415 -9.6489E-05 0.42042 0.00024712 587.795747093147 592.800202626526 46.055 0.49208 46.055 45.845 46.337 0 114 45 4 0 0 0 1.5325E-09 2 24838 131.44 89.33 1 2.1943 2.2195 0 17886000 3747000 14139000 19382 1988 7315 7485 30342;30343 30343 LAAEQELIR 9 0 1 Unmodified _LAAEQELIR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.7979 2 521.798206 1041.58186 NaN NaN NaN -0.079629 -4.155E-05 NaN NaN NaN NaN 56.432 0.4689 56.432 56.219 56.688 0 0 0 0 3.3392E-07 1 32413 119.27 76.028 1 NaN NaN 0 12712000 12712000 0 19383 1754 7316 7486 30344 30344 LAAFADALEFADEEK 15 1 0 Unmodified _LAAFADALEFADEEK_ 0 0 0 Q5SY16 Q5SY16 Q5SY16 NOL9 Polynucleotide 5-hydroxyl-kinase NOL9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.8994 2 820.396135 1638.77772 69130.02 0.98989 0.0008121 0.15863 0.00013014 1.1485 0.00094224 820.897771122436 824.403133099301 114.98 0.44494 114.98 114.71 115.15 0 96 28 5 0 0 0 5.1571E-06 1 72972 96.64 96.64 1 1.5766 1.6115 0 14316000 4540100 9776200 19384 1818 7317 7487 30345 30345 LAAFADALEFADEEK 15 1 0 Unmodified _LAAFADALEFADEEK_ 0 0 0 Q5SY16 Q5SY16 Q5SY16 NOL9 Polynucleotide 5-hydroxyl-kinase NOL9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.4045 2 820.396135 1638.77772 66455.1 0.94955 0.000779 0.50299 0.00041265 1.4525 0.0011917 820.89740416289 824.404006462009 114.43 0.48714 114.43 114.16 114.64 0 112 32 5 0 0 0 1.4771E-05 2 74340 89.403 89.403 1 1.1705 1.2019 0 11728000 4992200 6735900 19385 1818 7317 7487 30346;30347 30347 LAAFADALEFADEEK 15 1 0 Unmodified _LAAFADALEFADEEK_ 0 0 0 Q5SY16 Q5SY16 Q5SY16 NOL9 Polynucleotide 5-hydroxyl-kinase NOL9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 824.4026 2 820.396135 1638.77772 NaN NaN NaN -0.73865 -0.00060599 NaN NaN NaN NaN 126.46 0.56853 126.46 126.21 126.78 0 0 0 0 0.00081201 1 76081 67.456 48.214 1 NaN NaN 0 1007700 0 1007700 19386 1818 7317 7487 30348 30348 LAAFADALEFADEEK 15 1 0 Unmodified _LAAFADALEFADEEK_ 0 0 0 Q5SY16 Q5SY16 Q5SY16 NOL9 Polynucleotide 5-hydroxyl-kinase NOL9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.3962 2 820.396135 1638.77772 NaN NaN NaN 0.9418 0.00077265 NaN NaN NaN NaN 126.51 0.54137 126.51 126.21 126.75 0 0 0 0 0.0058736 2 76122 54.7 40.542 1 NaN NaN 0 1000200 1000200 0 19387 1818 7317 7487 30349;30350 30349 LAAFADALEFADEEK 15 1 0 Unmodified _LAAFADALEFADEEK_ 0 0 0 Q5SY16 Q5SY16 Q5SY16 NOL9 Polynucleotide 5-hydroxyl-kinase NOL9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 824.4039 2 820.396135 1638.77772 NaN NaN NaN -0.28496 -0.00023378 NaN NaN NaN NaN 126.29 0.56163 126.29 126.05 126.61 0 0 0 0 0.048239 1 75049 37.144 24.188 1 NaN NaN 0 1671000 0 1671000 19388 1818 7317 7487 30351 30351 LAAIVAK 7 1 0 Unmodified _LAAIVAK_ 0 0 0 Q53H34;P40429;Q9BSQ6;M0QYS1;B4DNC8;M0QZU1;A0A096LPE0 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 343.2337 2 343.233982 684.453411 103068.4 0.17972 6.1686E-05 0.21186 7.2719E-05 0.39158 0.0001344 343.233976138587 347.241015889568 35.617 1.3214 35.617 35.067 36.388 0 545 123 6 0 0 0 0.026837 3 17770 80.377 21.717 1 0.8551 1.0103 0 384990000 188280000 196710000 19389 1558 7318 7488 30352;30353;30354 30352 LAAIVAK 7 1 0 Unmodified _LAAIVAK_ 0 0 0 Q53H34;P40429;Q9BSQ6;M0QYS1;B4DNC8;M0QZU1;A0A096LPE0 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 343.234 2 343.233982 684.453411 101992.5 0.19563 6.7148E-05 0.21037 7.2207E-05 0.406 0.00013935 343.233939988733 347.24103847027 34.986 1.062 34.986 34.469 35.531 0 400 95 7 0 0 0 0.026837 2 17636 80.377 19.372 1 0.92377 1.0883 0 541090000 288470000 252630000 19390 1558 7318 7488 30355;30356 30356 LAAIVAK 7 1 0 Unmodified _LAAIVAK_ 0 0 0 Q53H34;P40429;Q9BSQ6;M0QYS1;B4DNC8;M0QZU1;A0A096LPE0 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 343.2338 2 343.233982 684.453411 101108.1 -0.25607 -8.7894E-05 0.35799 0.00012287 0.10192 3.4981E-05 343.233994653848 347.241080291914 39.957 1.0015 39.957 39.478 40.48 0 299 73 6 0 0 0 0.04687 2 18246 56.51 13.844 1 0.81451 0.65944 0 23546000 12876000 10670000 19391 1558 7318 7488 30357;30358 30358 LAAIVAK 7 1 0 Unmodified _LAAIVAK_ 0 0 0 Q53H34;P40429;Q9BSQ6;M0QYS1;B4DNC8;M0QZU1;A0A096LPE0 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 343.2339 2 343.233982 684.453411 102759.2 -0.25981 -8.9176E-05 0.37951 0.00013026 0.1197 4.1085E-05 343.233989519403 347.241087745412 39.819 0.97817 39.819 39.346 40.324 0 341 79 6 0 0 0 0.052963 2 17689 53.71 18.604 1 0.84593 0.67967 0 16107000 8598300 7508200 19392 1558 7318 7488 30359;30360 30360 LAALADQWQFLVQK 14 1 0 Unmodified _LAALADQWQFLVQK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.9527 2 815.951215 1629.88788 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.3 1 118.3 117.8 118.8 7.6294E-06 0 0 0 0.0085588 1 75907 52.79 27.998 1 19393 523 7319 7489 30361 30361 LAALEEQR 8 0 1 Unmodified _LAALEEQR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.2562 2 465.256174 928.497795 NaN NaN NaN 0.047822 2.225E-05 NaN NaN NaN NaN 30.133 0.31581 30.133 29.991 30.307 0 0 0 0 1.4203E-05 1 14639 128.57 40.537 1 NaN NaN 0 63260000 63260000 0 19394 886 7320 7490 30362 30362 LAALEEQR 8 0 1 Unmodified _LAALEEQR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.2619 2 465.256174 928.497795 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.04 1 30.04 29.54 30.54 -1.9073E-06 0 0 0 0.0055803 1 14628 83.265 30.098 1 19395 886 7320 7490 30363 30363 LAALEEQR 8 0 1 Unmodified _LAALEEQR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2565 2 465.256174 928.497795 NaN NaN NaN 0.35938 0.0001672 NaN NaN NaN NaN 29.692 0.43087 29.692 29.524 29.955 0 0 0 0 1.6738E-08 1 14311 137.18 42.517 1 NaN NaN 0 118510000 118510000 0 19396 886 7320 7490 30364 30364 LAALEEQR 8 0 1 Unmodified _LAALEEQR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.261 2 465.256174 928.497795 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.593 1 29.593 29.093 30.093 -1.9073E-06 0 0 0 0.003392 1 14307 96.253 19.207 1 19397 886 7320 7490 30365 30365 LAALEEQR 8 0 1 Unmodified _LAALEEQR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 465.2559 2 465.256174 928.497795 NaN NaN NaN -0.20999 -9.7697E-05 NaN NaN NaN NaN 33.849 0.30138 33.849 33.71 34.011 -3.8147E-06 0 0 0 0.022978 1 14847 63.565 15.717 1 NaN NaN 0 9927000 9927000 0 19398 886 7320 7490 30366 30366 LAALEEQR 8 0 1 Unmodified _LAALEEQR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.2615 2 465.256174 928.497795 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.752 1 33.752 33.252 34.252 0 0 0 0 0.014553 1 14841 70.919 17.752 1 19399 886 7320 7490 30367 30367 LAALEEQR 8 0 1 Unmodified _LAALEEQR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 465.2561 2 465.256174 928.497795 NaN NaN NaN 0.36885 0.00017161 NaN NaN NaN NaN 33.913 0.31881 33.913 33.758 34.077 0 0 0 0 0.018884 1 14400 66.073 14.286 1 NaN NaN 0 8314100 8314100 0 19400 886 7320 7490 30368 30368 LAALEEQR 8 0 1 Unmodified _LAALEEQR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 470.2604 2 465.256174 928.497795 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.834 1 33.834 33.334 34.334 0 0 0 0 0.0055803 1 14401 83.265 30.098 1 19401 886 7320 7490 30369 30369 LAALEQNVER 10 0 1 Unmodified _LAALEQNVER_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.8165 2 571.811845 1141.60914 78981.46 0.82493 0.00047171 0.28919 0.00016536 1.1141 0.00063707 571.812422682086 576.815929516711 44.246 0.57191 44.246 43.964 44.535 -3.8147E-06 196 50 5 0 0 0 0.00022929 2 23676 93.111 60.559 1 0.94847 0.99842 0 39914000 18919000 20995000 19402 1260 7321 7491 30370;30371 30370 LAALEQNVER 10 0 1 Unmodified _LAALEQNVER_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.8125 2 571.811845 1141.60914 79730.32 0.71053 0.00040629 0.0295 1.6868E-05 0.74003 0.00042316 571.811769740139 576.815984353144 43.518 0.45092 43.518 43.299 43.75 -3.8147E-06 164 35 6 0 0 0 4.8926E-08 2 23655 116.05 81.798 1 0.90244 1.05 0 60313000 29692000 30621000 19403 1260 7321 7491 30372;30373 30373 LAALEQNVER 10 0 1 Unmodified _LAALEQNVER_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.8166 2 571.811845 1141.60914 79478.63 0.25584 0.00014629 0.27377 0.00015655 0.52962 0.00030284 571.812329818607 576.816008911992 51.114 0.65217 51.114 50.887 51.539 0 145 44 5 0 0 0 0.00072198 2 25086 82.287 43.265 1 1.8746 1.5971 0 5504000 1978000 3526000 19404 1260 7321 7491 30374;30375 30374 LAALEQNVER 10 0 1 Unmodified _LAALEQNVER_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.8167 2 571.811845 1141.60914 79609.74 0.22828 0.00013053 0.39148 0.00022385 0.61976 0.00035439 571.812320456422 576.816119474023 51.478 0.73676 51.478 51.216 51.953 0 162 51 5 0 0 0 0.0011014 2 24726 76.17 41.984 1 1.9312 1.7076 0 3929800 1295100 2634700 19405 1260 7321 7491 30376;30377 30376 LAALNPESNTAGLDIFAK 18 1 0 Unmodified _LAALNPESNTAGLDIFAK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 926.9997 2 922.991266 1843.96798 63839.93 1.0365 0.00095666 0.20771 0.00019172 1.2442 0.0011484 923.494132409076 926.998160491176 113.58 0.66573 113.58 113.31 113.98 0 244 48 9 0 0 0 3.27E-08 4 71776 114.72 102.56 1 2.9366 3.1766 0 35817000 8365300 27452000 19406 1362 7322 7492 30378;30379;30380;30381 30379 LAALNPESNTAGLDIFAK 18 1 0 Unmodified _LAALNPESNTAGLDIFAK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 927.4997 2 922.991266 1843.96798 63545.81 0.65119 0.00060104 0.50569 0.00046675 1.1569 0.0010678 922.992550881003 926.998406971283 112.98 0.62814 112.98 112.68 113.31 -7.6294E-06 237 42 9 0 0 0 0.00035582 2 73066 56.139 56.139 1 2.5386 2.8145 0 47523000 12656000 34867000 19407 1362 7322 7492 30382;30383 30382 LAALNPESNTAGLDIFAK 18 1 0 Unmodified _LAALNPESNTAGLDIFAK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 927.5019 2 922.991266 1843.96798 63309.83 0.73951 0.00068256 0.11708 0.00010806 0.85659 0.00079062 922.991331355502 926.998488866804 124.85 0.54276 124.85 124.62 125.17 0 117 25 9 0 0 0 6.2966E-05 3 74777 69.716 69.716 1 2.1694 1.7004 0 11516000 3683300 7832200 19408 1362 7322 7492 30384;30385;30386 30385 LAALNPESNTAGLDIFAK 18 1 0 Unmodified _LAALNPESNTAGLDIFAK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 922.9932 2 922.991266 1843.96798 63972.45 0.59654 0.0005506 0.18749 0.00017305 0.78403 0.00072365 922.991387317795 927.500140574912 124.73 0.4922 124.73 124.46 124.95 0 117 23 7 0 0 0 0.00073924 1 73805 56.951 53.527 1 2.0821 1.7141 0 10436000 3376200 7059400 19409 1362 7322 7492 30387 30387 LAALNVTEK 9 1 0 Unmodified _LAALNVTEK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.7886 2 479.782025 957.549496 88624.11 0.19558 9.3833E-05 -0.017926 -8.6005E-06 0.17765 8.5233E-05 479.781926057182 483.789115872828 49.544 0.57301 49.544 49.145 49.718 0 149 36 6 0 0 0 0.00055371 1 27251 97.635 45.781 1 1.3419 1.5088 0 70746000 33952000 36794000 19410 1412 7323 7493 30388 30388 LAALPNVYEVISK 13 1 0 Unmodified _LAALPNVYEVISK_ 0 0 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B3KVF0;B4DVK5;Q59F49 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.916 2 708.908485 1415.80242 73179.25 1.0634 0.00075389 -0.22872 -0.00016214 0.83473 0.00059175 708.908275392416 712.915324470691 113.56 0.75509 113.56 113.3 114.05 0 229 55 7 0 0 0 0.00032609 2 71993 64.374 64.374 1 1.5114 1.4843 0 23173000 8246400 14927000 19411 745 7324 7494 30389;30390 30390 LAALPNVYEVISK 13 1 0 Unmodified _LAALPNVYEVISK_ 0 0 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B3KVF0;B4DVK5;Q59F49 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.9078 2 708.908485 1415.80242 73175.64 0.72291 0.00051248 -0.00099379 -7.0451E-07 0.72192 0.00051177 708.908231911217 712.915412076233 112.95 0.77478 112.95 112.65 113.43 0 214 52 6 0 0 0 4.4689E-06 2 73138 107.06 100.4 1 1.4232 1.4413 0 29201000 11408000 17793000 19412 745 7324 7494 30391;30392 30392 LAALPNVYEVISK 13 1 0 Unmodified _LAALPNVYEVISK_ 0 0 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B3KVF0;B4DVK5;Q59F49 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.9097 2 708.908485 1415.80242 72630.2 0.84902 0.00060188 0.13001 9.2164E-05 0.97903 0.00069404 708.908465320427 712.915656896444 125.03 0.47392 125.03 124.81 125.28 0 113 20 7 0 0 0 0.0021857 1 74919 54.784 54.784 1 0.92455 0.73044 0 5219200 2806700 2412500 19413 745 7324 7494 30393 30393 LAALPNVYEVISK 13 1 0 Unmodified _LAALPNVYEVISK_ 0 0 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B3KVF0;B4DVK5;Q59F49 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.9086 2 708.908485 1415.80242 73293.89 0.76468 0.00054208 0.49509 0.00035097 1.2598 0.00089306 708.908742093572 712.915787678521 124.85 0.49772 124.85 124.63 125.13 0 120 23 7 0 0 0 0.0054583 1 73887 47.302 47.302 1 1.0209 0.83286 0 6398300 3125200 3273000 19414 745 7324 7494 30394 30394 LAALSASLAR 10 0 1 Unmodified _LAALSASLAR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7951 2 486.795466 971.57638 87362.44 -0.035937 -1.7494E-05 0.40289 0.00019613 0.36695 0.00017863 486.795615043201 491.799758269964 66.284 0.57954 66.284 65.914 66.494 0 240 52 7 0 0 0 7.639E-06 2 38142 107 66.733 1 0.89772 0.99816 0 75082000 40685000 34397000 19415 886 7325 7495 30395;30396 30396 LAALSASLAR 10 0 1 Unmodified _LAALSASLAR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7953 2 486.795466 971.57638 87426.57 -0.015539 -7.5642E-06 0.064699 3.1495E-05 0.049161 2.3931E-05 486.795403681203 491.799576593245 65.031 0.63234 65.031 64.657 65.289 0 242 51 8 0 0 0 4.8296E-06 2 38280 109.11 72.715 1 0.90144 1.0315 0 86527000 44921000 41606000 19416 886 7325 7495 30397;30398 30398 LAALSASLAR 10 0 1 Unmodified _LAALSASLAR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.7954 2 486.795466 971.57638 86918.8 0.19361 9.4251E-05 0.13031 6.3432E-05 0.32392 0.00015768 486.795457210196 491.799614236255 76.039 0.84038 76.039 75.482 76.322 0 253 57 6 0 0 0 0.0083024 2 40290 56.258 32.83 1 1.158 0.94769 0 13335000 5544000 7791100 19417 886 7325 7495 30399;30400 30399 LAALSASLAR 10 0 1 Unmodified _LAALSASLAR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.7997 2 486.795466 971.57638 87574.68 0.13696 6.6672E-05 0.11964 5.8243E-05 0.25661 0.00012491 486.795449007908 491.799614105124 76.225 0.83823 76.225 75.752 76.59 0 250 56 6 0 0 0 0.0067494 2 39641 58.37 32.83 1 1.1007 0.89539 0 12399000 5697600 6701500 19418 886 7325 7495 30401;30402 30401 LAANISGDK 9 1 0 Unmodified _LAANISGDK_ 0 0 0 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.7502 2 444.742899 887.471246 91233.76 0.071484 3.1792E-05 0.29584 0.00013157 0.36732 0.00016337 444.743013927944 448.750051028979 25.398 0.56165 25.398 25.113 25.675 -1.9073E-06 108 28 7 0 0 0 0.0010227 1 11037 91.069 35.627 1 0.69427 0.6801 0 21771000 10659000 11112000 19419 2119 7326 7496 30403 30403 LAANISGDK 9 1 0 Unmodified _LAANISGDK_ 0 0 0 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.7508 2 444.742899 887.471246 91135.02 0.27271 0.00012129 1.3899 0.00061813 1.6626 0.00073941 444.743178312654 448.750595890736 25.165 0.63631 25.165 24.756 25.393 0 56 25 6 0 0 0 0.0030108 1 10817 72.879 43.73 1 0.99494 1.002 0 27811000 13196000 14615000 19420 2119 7326 7496 30404 30404 LAAQSCALSLVR 12 0 1 Unmodified _LAAQSCALSLVR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.6501 2 644.855729 1287.69691 75979.07 0.80896 0.00052166 -0.102 -6.5776E-05 0.70696 0.00045589 644.855534378391 649.85973157933 79.074 0.54034 79.074 78.851 79.392 0 224 49 7 0 0 0 0.0033762 1 46801 86.014 86.014 1 1.2096 1.3606 0 95729000 37654000 58075000 19421 1691 7327 7497 30405 30405 LAAQSCALSLVR 12 0 1 Unmodified _LAAQSCALSLVR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.856 2 644.855729 1287.69691 74880.09 0.69645 0.00044911 -0.20539 -0.00013245 0.49106 0.00031666 644.855614055308 649.859792894337 78.008 0.52919 78.008 77.772 78.301 0 239 43 7 0 0 0 2.8899E-09 2 47297 124.67 124.67 1 1.161 1.3324 0 80227000 33906000 46321000 19422 1691 7327 7497 30406;30407 30407 LAAQSCALSLVR 12 0 1 Unmodified _LAAQSCALSLVR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.8604 2 644.855729 1287.69691 74469.08 0.79414 0.0005121 -0.0050833 -3.278E-06 0.78906 0.00050883 644.855640574921 649.859954764645 90.711 0.73738 90.711 90.323 91.06 0 221 43 9 0 0 0 0.00010525 2 50222 95.483 65.709 1 1.4818 1.212 0 13567000 5219600 8347600 19423 1691 7327 7497 30408;30409 30408 LAAQSCALSLVR 12 0 1 Unmodified _LAAQSCALSLVR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.856 2 644.855729 1287.69691 74925.57 0.49771 0.00032095 -0.26444 -0.00017052 0.23328 0.00015043 644.855538177039 649.859874724958 90.574 0.55572 90.574 90.343 90.899 0 175 30 8 0 0 0 2.4328E-05 2 49385 101.38 101.38 1 1.5095 1.2229 0 11833000 4696000 7137400 19424 1691 7327 7497 30410;30411 30411 LAAQSLDTSGLR 12 0 1 Unmodified _LAAQSLDTSGLR_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.3347 2 616.335684 1230.65681 77454.04 0.47331 0.00029172 -0.21439 -0.00013214 0.25892 0.00015958 616.335640862717 621.33935921846 58.738 0.63189 58.738 58.399 59.031 -3.8147E-06 272 52 8 0 0 0 0.00012529 2 33182 94.309 51.226 1 0.98076 1.1259 0 138570000 72041000 66530000 19425 1450 7328 7498 30412;30413 30412 LAAQSLDTSGLR 12 0 1 Unmodified _LAAQSLDTSGLR_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.3351 2 616.335684 1230.65681 78307.4 0.42674 0.00026301 0.39296 0.00024219 0.8197 0.00050521 616.335855021117 621.339656262175 57.683 0.47554 57.683 57.443 57.919 0 235 38 10 0 0 0 8.7577E-23 3 33339 157.24 97.894 1 0.98382 1.126 0 163670000 83300000 80370000 19426 1450 7328 7498 30414;30415;30416 30414 LAAQSLDTSGLR 12 0 1 Unmodified _LAAQSLDTSGLR_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.336 2 616.335684 1230.65681 77641.46 0.41084 0.00025322 -0.038692 -2.3847E-05 0.37215 0.00022937 616.3356891877 621.33963391139 68.192 0.71939 68.192 67.929 68.648 -7.6294E-06 291 52 10 0 0 0 0.00022908 2 35537 84.658 37.084 1 1.5938 1.3443 0 28793000 9852500 18940000 19427 1450 7328 7498 30417;30418 30418 LAAQSLDTSGLR 12 0 1 Unmodified _LAAQSLDTSGLR_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.3395 2 616.335684 1230.65681 77467.97 0.40774 0.0002513 0.2047 0.00012616 0.61243 0.00037746 616.335763058551 621.339737938767 68.699 0.71792 68.699 68.451 69.169 0 296 50 11 0 0 0 0.00020462 2 35025 83 55.696 1 1.7245 1.4902 0 22946000 8650800 14295000 19428 1450 7328 7498 30419;30420 30419 LAAQSQHVGFAR 12 0 1 Unmodified _LAAQSQHVGFAR_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8435 2 642.84401 1283.67347 77077.45 0.47041 0.0003024 -0.49651 -0.00031918 -0.026097 -1.6776E-05 642.843639540691 647.847518429743 28.424 0.17981 28.424 28.36 28.54 0 34 12 4 0 0 0 1.6138E-05 2 13431 105.2 96.614 1 0.74296 0.77922 0 11032000 6272800 4759700 19429 1835 7329 7499 30421;30422 30422 LAAQSQHVGFAR 12 0 1 Unmodified _LAAQSQHVGFAR_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8443 2 642.84401 1283.67347 78325.44 0.31573 0.00020296 -0.66456 -0.00042721 -0.34884 -0.00022425 642.844120355301 647.847636460909 27.639 0.16718 27.639 27.539 27.706 1.9073E-06 31 8 5 0 0 0 9.3989E-05 2 12941 96.143 87.918 1 0.85421 0.91939 0 25769000 13082000 12687000 19430 1835 7329 7499 30423;30424 30424 LAAQSQHVGFAR 12 0 1 Unmodified _LAAQSQHVGFAR_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 428.8977 3 428.898432 1283.67347 92110.3 -0.4166 -0.00017868 0.30222 0.00012962 -0.11438 -4.9055E-05 428.89818965903 432.234509682994 32.219 0.30559 32.219 32.072 32.378 3.8147E-06 63 15 6 0 0 0 0.043163 1 13841 19.843 19.843 1 1.7442 1.4853 0 2830500 1039200 1791400 19431 1835 7329 7499 30425 30425 LAAQSQHVGFAR 12 0 1 Unmodified _LAAQSQHVGFAR_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 432.2343 3 428.898432 1283.67347 NaN NaN NaN 0.10625 4.557E-05 NaN NaN NaN NaN 32.257 0.27162 32.257 32.146 32.418 0 0 0 0 0.037321 1 13402 33.192 13.949 1 NaN NaN 0 1914300 0 1914300 19432 1835 7329 7499 30426 30426 LAASASTQQLQEVK 14 1 0 Unmodified _LAASASTQQLQEVK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.4059 2 737.399012 1472.78347 70613.18 0.7174 0.00052901 -0.26725 -0.00019707 0.45015 0.00033194 737.398873472437 741.405891481256 49.197 0.50316 49.197 48.942 49.445 0 215 36 8 0 0 0 1.2463E-21 2 26883 183.99 183.99 1 0.7017 0.79833 0 167730000 97097000 70635000 19433 1421 7330 7500 30427;30428 30428 LAASASTQQLQEVK 14 1 0 Unmodified _LAASASTQQLQEVK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.3996 2 737.399012 1472.78347 71297.14 0.69841 0.00051501 -0.047856 -3.5289E-05 0.65055 0.00047972 737.900239175973 741.406220705627 48.136 0.90503 48.136 47.517 48.422 -3.8147E-06 297 64 7 0 0 0 4.2563E-06 2 27047 122.7 108.02 1 0.7066 0.79422 0 73254000 40863000 32390000 19434 1421 7330 7500 30429;30430 30430 LAASASTQQLQEVK 14 1 0 Unmodified _LAASASTQQLQEVK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.407 2 737.399012 1472.78347 70291.28 0.70383 0.000519 0.04898 3.6117E-05 0.75281 0.00055512 737.399146333948 741.406162828385 57.329 0.77571 57.329 57.01 57.785 0 353 56 10 0 0 0 0.0002297 2 28905 88.83 88.83 1 1.2351 1.0272 0 46985000 20976000 26009000 19435 1421 7330 7500 30431;30432 30431 LAASASTQQLQEVK 14 1 0 Unmodified _LAASASTQQLQEVK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 741.4061 2 737.399012 1472.78347 70609.55 0.67776 0.00049978 -0.0079201 -5.8402E-06 0.66984 0.00049394 737.39909582323 741.406089030119 57.861 0.82626 57.861 57.602 58.429 0 380 60 10 0 0 0 1.8646E-09 2 28627 152.67 152.67 1 1.3778 1.1561 0 48356000 21410000 26947000 19436 1421 7330 7500 30433;30434 30433 LAASGEGGLQELSGHFENQK 20 1 0 Unmodified _LAASGEGGLQELSGHFENQK_ 0 0 0 Q16643;D6RFI1 Q16643 Q16643 DBN1 Drebrin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.0112 3 691.339625 2070.99705 NaN NaN NaN -0.24524 -0.00016954 NaN NaN NaN NaN 74.713 0.51035 74.713 74.472 74.982 0 0 0 0 1.3113E-18 1 43787 111.65 93.281 1 NaN NaN 0 19173000 0 19173000 19437 1773 7331 7501 30435 30435 LAASGEGGLQELSGHFENQK 20 1 0 Unmodified _LAASGEGGLQELSGHFENQK_ 0 0 0 Q16643;D6RFI1 Q16643 Q16643 DBN1 Drebrin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.0112 3 691.339625 2070.99705 NaN NaN NaN -0.11041 -7.633E-05 NaN NaN NaN NaN 73.468 0.5374 73.468 73.279 73.816 0 0 0 0 4.2878E-14 1 44052 97.271 83.23 1 NaN NaN 0 27426000 0 27426000 19438 1773 7331 7501 30436 30436 LAASGEGGLQELSGHFENQK 20 1 0 Unmodified _LAASGEGGLQELSGHFENQK_ 0 0 0 Q16643;D6RFI1 Q16643 Q16643 DBN1 Drebrin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.3456 3 691.339625 2070.99705 72690.05 0.51545 0.00035635 0.089911 6.2159E-05 0.60536 0.00041851 691.674594167098 694.345034904523 86.188 0.54451 86.188 85.901 86.445 0 145 28 8 0 0 0 1.9086E-06 1 46385 54.223 54.223 1 1.8132 1.4795 0 6211400 2724600 3486900 19439 1773 7331 7501 30437 30437 LAASLWLWK 9 1 0 Unmodified _LAASLWLWK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.3267 2 544.318577 1086.6226 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.63 1 115.63 115.13 116.13 0 0 0 0 0.013169 1 73653 60.59 24.71 1 19440 878 7332 7502 30438 30438 LAASLWLWK 9 1 0 Unmodified _LAASLWLWK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.3262 2 544.318577 1086.6226 86484.34 0.67602 0.00036797 -0.34273 -0.00018656 0.33329 0.00018141 544.317940634874 548.325789119281 127 0.50522 127 126.66 127.16 0 70 21 5 0 0 0 0.042514 1 76428 41.029 21.393 1 1.4717 1.2931 0 1012300 413270 599020 19441 878 7332 7502 30439 30439 LAATNALLNSLEFTK 15 1 0 Unmodified _LAATNALLNSLEFTK_ 0 0 0 B2RBR9;Q14974;B7Z5M1;J3KTM9;B7Z752 B2RBR9 B2RBR9 KPNB1 Importin subunit beta-1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.4453 2 803.445963 1604.87737 NaN NaN NaN -0.17808 -0.00014308 NaN NaN NaN NaN 129.08 0.40997 129.08 128.87 129.28 1.5259E-05 0 0 0 0.00054664 1 78003 70.622 36.089 1 NaN NaN 0 1366000 1366000 0 19442 880 7333 7503 30440 30440 LAAVALINAAIQK 13 1 0 Unmodified _LAAVALINAAIQK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;Q6P1N4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.4133 2 648.405912 1294.79727 78958.74 1.0879 0.00070537 -0.14 -9.0776E-05 0.94785 0.00061459 648.405625145143 652.412858169186 111.29 0.48698 111.29 111.18 111.67 0 120 34 6 0 0 0 0.00014141 1 69996 82.287 82.287 1 1.7185 1.7787 0 14728000 6045500 8682000 19443 352 7334 7504 30441 30441 LAAVALINAAIQK 13 1 0 Unmodified _LAAVALINAAIQK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;Q6P1N4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.4138 2 648.405912 1294.79727 78172.71 0.76336 0.00049497 -0.073402 -4.7594E-05 0.68996 0.00044737 648.405689195916 652.413006195669 110.66 0.42736 110.66 110.5 110.92 0 127 32 6 0 0 0 2.9476E-06 2 71211 108.98 108.98 1 1.6144 1.6678 0 11440000 4246100 7194400 19444 352 7334 7504 30442;30443 30442 LAAVALINAAIQK 13 1 0 Unmodified _LAAVALINAAIQK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;Q6P1N4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.4066 2 648.405912 1294.79727 78908.12 0.93715 0.00060765 0.17497 0.00011345 1.1121 0.0007211 648.406069786846 652.413047066556 122.78 0.35219 122.78 122.66 123.01 -7.6294E-06 48 17 5 0 0 0 0.0075143 1 72390 44.98 44.619 1 0.82353 0.68162 0 1598900 844450 754470 19445 352 7334 7504 30444 30444 LAAVDVSAR 9 0 1 Unmodified _LAAVDVSAR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.2629 2 451.258717 900.50288 NaN NaN NaN -0.1302 -5.8755E-05 NaN NaN NaN NaN 39.336 0.49903 39.336 39.051 39.55 0 0 0 0 0.048213 1 20871 47.603 2.5214 1 NaN NaN 0 31098000 0 31098000 19446 397;1622 7335 7505 30445 30445 LAAVVSACK 9 1 0 Unmodified _LAAVVSACK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.7573 2 459.757495 917.500437 NaN NaN NaN -0.22916 -0.00010536 NaN NaN NaN NaN 32.664 0.36089 32.664 32.512 32.873 3.8147E-06 0 0 0 0.0077375 1 16255 69.628 39.821 1 NaN NaN 0 12702000 12702000 0 19447 1665 7336 7506 30446 30446 LACDFLAR 8 0 1 Unmodified _LACDFLAR_ 0 0 0 Q8IY81;J3KS36 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.2474 2 483.247295 964.480036 90813.24 0.143 6.9103E-05 0.51151 0.00024718 0.6545 0.00031629 483.247426740016 488.251724713907 76.307 0.7556 76.307 75.942 76.697 0 149 55 4 0 0 0 0.054494 1 40621 42.109 15.507 1 1.128 0.97875 0 2431300 978280 1453100 19448 1898 7337 7507 30447 30447 LACDFLAR 8 0 1 Unmodified _LACDFLAR_ 0 0 0 Q8IY81;J3KS36 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.2471 2 483.247295 964.480036 89629.12 0.1959 9.4669E-05 0.23223 0.00011222 0.42813 0.00020689 483.24711786822 488.251591463685 76.622 0.72949 76.622 76.235 76.964 0 158 51 4 0 0 0 0.054494 1 40007 42.109 15.507 1 1.1046 0.99 0 2286300 1030300 1256000 19449 1898 7337 7507 30448 30448 LACDVDQVTR 10 0 1 Unmodified _LACDVDQVTR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.7878 2 588.787512 1175.56047 80812.7 0.74322 0.0004376 0.040372 2.3771E-05 0.78359 0.00046137 588.787645118937 593.79200371031 37.06 0.46875 37.06 36.785 37.254 0 149 42 6 0 0 0 0.012557 1 18698 50.473 27.402 1 0.50187 0.5114 0 18616000 13212000 5403400 19450 1665 7338 7508 30449 30449 LACDVDQVTR 10 0 1 Unmodified _LACDVDQVTR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.7859 2 588.787512 1175.56047 NaN NaN NaN -0.12717 -7.4875E-05 NaN NaN NaN NaN 42.379 0.54442 42.379 42.134 42.679 -3.8147E-06 0 0 0 0.052955 1 19726 46.001 22.93 1 NaN NaN 0 3567500 3567500 0 19451 1665 7338 7508 30450 30450 LACDVDQVTR 10 0 1 Unmodified _LACDVDQVTR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.7918 2 588.787512 1175.56047 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.312 1 42.312 41.812 42.812 0 0 0 0 0.03327 1 19772 49.35 25.196 1 19452 1665 7338 7508 30451 30451 LACDVDQVTR 10 0 1 Unmodified _LACDVDQVTR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.2895 2 588.787512 1175.56047 79087.41 0.18436 0.00010855 -0.082316 -4.8466E-05 0.10205 6.0085E-05 588.787429792062 593.791026980477 42.636 0.55695 42.636 42.398 42.954 0 162 35 7 0 0 0 0.0029901 1 19324 66.568 30.172 1 0.30066 0.25209 0 4872300 3855200 1017000 19453 1665 7338 7508 30452 30452 LACLSEEGNEIESGK 15 1 0 Unmodified _LACLSEEGNEIESGK_ 0 0 0 Q49AG4;G3V1J5;A8QI98;Q9Y2L1;F2Z2C0 Q49AG4 Q49AG4 DIS3 Exosome complex exonuclease RRP44 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.3892 2 818.380159 1634.74577 NaN NaN NaN 0.022653 1.8539E-05 NaN NaN NaN NaN 56.376 0.23336 56.376 56.252 56.485 0 0 0 0 0.042454 2 32364 38.238 29.656 1 NaN NaN 0 3878300 0 3878300 19454 802 7339 7509 30453;30454 30453 LADALQELR 9 0 1 Unmodified _LADALQELR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.7949 2 514.790381 1027.56621 84905.36 0.42485 0.00021871 0.13808 7.1083E-05 0.56293 0.00028979 514.790403983963 519.794367036386 72.053 0.90062 72.053 71.806 72.707 0 453 67 12 0 0 0 6.7382E-06 2 42013 130.75 37.612 1 1.2617 1.4945 0 437000000 202300000 234700000 19455 1440 7340 7510 30455;30456 30455 LADALQELR 9 0 1 Unmodified _LADALQELR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.7903 2 514.790381 1027.56621 84905.61 0.48556 0.00024996 0.09881 5.0866E-05 0.58437 0.00030083 514.790409403773 519.794351516401 70.804 1.0391 70.804 70.485 71.524 0 472 78 11 0 0 0 1.1812E-18 2 42227 175.38 45.337 1 1.2686 1.4827 0 587680000 275510000 312170000 19456 1440 7340 7510 30457;30458 30458 LADALQELR 9 0 1 Unmodified _LADALQELR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.7903 2 514.790381 1027.56621 85146.69 0.34896 0.00017964 0.11997 6.1759E-05 0.46893 0.0002414 514.79042722482 519.794471002749 82.309 1.0662 82.309 82.03 83.096 0 278 63 8 0 0 0 1.5383E-05 2 44680 122.19 29.717 1 1.2698 1.0781 0 33404000 13968000 19436000 19457 1440 7340 7510 30459;30460 30460 LADALQELR 9 0 1 Unmodified _LADALQELR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.7903 2 514.790381 1027.56621 84732.49 0.18682 9.6172E-05 0.44423 0.00022869 0.63105 0.00032486 514.790458890944 519.794542953203 82.519 0.97024 82.519 82.194 83.164 0 309 56 9 0 0 0 0.00012676 2 43935 109.11 31.187 1 1.3118 1.1443 0 26774000 12177000 14598000 19458 1440 7340 7510 30461;30462 30462 LADDLSTLQEK 11 1 0 Unmodified _LADDLSTLQEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8215 2 616.822075 1231.6296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.351 1 60.351 59.851 60.851 3.8147E-06 0 0 0 7.2066E-13 1 34444 121.8 83.504 1 19459 186;1747 7341 7511 30463 30463 LADDLSTLQEK 11 1 0 Unmodified _LADDLSTLQEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8215 2 616.822075 1231.6296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.118 1 61.118 60.618 61.618 0 0 0 0 0.00082694 1 34932 70.363 25.643 1 19460 186;1747 7341 7511 30464 30464 LADDLSTLQEK 11 1 0 Unmodified _LADDLSTLQEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.8294 2 616.822075 1231.6296 79843.09 0.21773 0.0001343 -0.11153 -6.8795E-05 0.10619 6.5502E-05 616.821720191558 620.829055313892 69.972 0.68616 69.972 69.785 70.471 0 236 55 8 0 0 0 0.0016832 2 36677 65.627 65.627 1 1.4536 1.145 0 17554000 7509300 10045000 19461 186;1747 7341 7511 30465;30466 30465 LADDLSTLQEK 11 1 0 Unmodified _LADDLSTLQEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.8293 2 616.822075 1231.6296 79292.45 0.18875 0.00011643 0.048772 3.0084E-05 0.23753 0.00014651 616.821672587558 620.829065930718 70.536 0.78945 70.536 70.352 71.142 0 223 65 6 0 0 0 5.6003E-06 2 36242 110.53 110.53 1 1.5456 1.2413 0 17569000 6804900 10764000 19462 186;1747 7341 7511 30467;30468 30467 LADFGALHR 9 0 1 Unmodified _LADFGALHR_ 0 0 0 Q9BW92;Q6ST48;F6S7Q7;U3KQG0 Q9BW92 Q9BW92 TARS2 Threonine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 337.187 3 333.850531 998.529764 107680.2 0.099069 3.3074E-05 -0.066253 -2.2119E-05 0.032816 1.0956E-05 333.850401776413 337.186545830771 48.46 0.36947 48.46 48.243 48.612 0 79 29 4 0 0 0 0.021333 1 26377 34.721 20.054 1 1.1814 1.1829 0 8999200 4015500 4983700 19463 2011 7342 7512 30469 30469 LADFGALHR 9 0 1 Unmodified _LADFGALHR_ 0 0 0 Q9BW92;Q6ST48;F6S7Q7;U3KQG0 Q9BW92 Q9BW92 TARS2 Threonine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 337.1865 3 333.850531 998.529764 106421.6 0.081728 2.7285E-05 -0.20007 -6.6793E-05 -0.11834 -3.9508E-05 333.85041912424 337.186508414547 47.018 0.33239 47.018 46.779 47.112 0 76 29 4 0 0 0 0.0099065 2 26010 45.161 29.499 1 1.1742 1.1819 0 10824000 4615500 6208400 19464 2011 7342 7512 30470;30471 30470 LADFGLAR 8 0 1 Unmodified _LADFGLAR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6;K7ELV5;B3KX76;Q8IWB3;H0YAZ9;Q9BWF9;Q9BVE2;E7EUK8;B4DK59;B4DHU6;B4DER5;E5RGN0;Q96GA5;A0A087X209;Q59G02;Q9BRL4;A0A087WZU2;F5H6Z0;B4DGP5;A0A024R996;A0A140VK97;A0A024R183;B4DK03;A0A024R980;A0A024RBH0;B7Z8T0;J3QSD7;A0A024RA66;A0A024RA85;Q00534;Q96Q40;O94921;Q07002;Q00536;Q00537;Q14004;B5BU53;B2R9L6;A0A024R880;P50750;A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9;A0A024R8R3;Q00526;K7EJ83;F8VZZ0;F8VZ51;Q6LC83;A0A024RBB6;P11802;F8VXD2;F8VYH9;F8VTV8;F8VWX7;Q9NYV4 A0A024QZP7;B5BU53;A0A024RB10;F8VZZ0;Q9NYV4 A0A024QZP7 CDC2;CDK1;DKFZp686L20222;CDK3;PCTK3;CDK16;CDK13;CDK14;PCTK1;CDK17;PCTK2;CDK12;CDC2L5;CDK6;CDK15;CDK18;CDK9;CDK2;CDK4 Cyclin-dependent kinase 1;Cyclin-dependent kinase 6;Cyclin-dependent kinase 15;Cyclin-dependent kinase 14;Cyclin-dependent kinase 18;Cyclin-dependent kinase 16;Cyclin-dependent kinase 17;Cyclin-dependent kinase 13;Cyclin-dependent kinase 9;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3;Cyclin-dependent kinase 4;Cyclin-dependent kinase 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 431.7427 2 431.742702 861.470852 90522.49 0.12539 5.4134E-05 0.071921 3.1051E-05 0.19731 8.5186E-05 431.74265158513 436.74674078264 67.98 1.2758 67.98 67.395 68.671 0 494 110 7 0 0 0 0.013281 2 39123 65.676 0 1 1.3753 1.5669 0 117210000 49472000 67736000 19465 25;318;331;243;2085 7343 7513 30472;30473 30472 LADFGLAR 8 0 1 Unmodified _LADFGLAR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6;K7ELV5;B3KX76;Q8IWB3;H0YAZ9;Q9BWF9;Q9BVE2;E7EUK8;B4DK59;B4DHU6;B4DER5;E5RGN0;Q96GA5;A0A087X209;Q59G02;Q9BRL4;A0A087WZU2;F5H6Z0;B4DGP5;A0A024R996;A0A140VK97;A0A024R183;B4DK03;A0A024R980;A0A024RBH0;B7Z8T0;J3QSD7;A0A024RA66;A0A024RA85;Q00534;Q96Q40;O94921;Q07002;Q00536;Q00537;Q14004;B5BU53;B2R9L6;A0A024R880;P50750;A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9;A0A024R8R3;Q00526;K7EJ83;F8VZZ0;F8VZ51;Q6LC83;A0A024RBB6;P11802;F8VXD2;F8VYH9;F8VTV8;F8VWX7;Q9NYV4 A0A024QZP7;B5BU53;A0A024RB10;F8VZZ0;Q9NYV4 A0A024QZP7 CDC2;CDK1;DKFZp686L20222;CDK3;PCTK3;CDK16;CDK13;CDK14;PCTK1;CDK17;PCTK2;CDK12;CDC2L5;CDK6;CDK15;CDK18;CDK9;CDK2;CDK4 Cyclin-dependent kinase 1;Cyclin-dependent kinase 6;Cyclin-dependent kinase 15;Cyclin-dependent kinase 14;Cyclin-dependent kinase 18;Cyclin-dependent kinase 16;Cyclin-dependent kinase 17;Cyclin-dependent kinase 13;Cyclin-dependent kinase 9;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3;Cyclin-dependent kinase 4;Cyclin-dependent kinase 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 431.7425 2 431.742702 861.470852 90401.09 0.024398 1.0534E-05 -0.071428 -3.0839E-05 -0.04703 -2.0305E-05 431.742579672242 436.746695006533 66.742 1.2528 66.742 66.185 67.438 0 473 103 7 0 0 0 0.00098095 3 39388 120.65 0 1 1.3842 1.5751 0 126510000 53034000 73479000 19466 25;318;331;243;2085 7343 7513 30474;30475;30476 30474 LADFGLAR 8 0 1 Unmodified _LADFGLAR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6;K7ELV5;B3KX76;Q8IWB3;H0YAZ9;Q9BWF9;Q9BVE2;E7EUK8;B4DK59;B4DHU6;B4DER5;E5RGN0;Q96GA5;A0A087X209;Q59G02;Q9BRL4;A0A087WZU2;F5H6Z0;B4DGP5;A0A024R996;A0A140VK97;A0A024R183;B4DK03;A0A024R980;A0A024RBH0;B7Z8T0;J3QSD7;A0A024RA66;A0A024RA85;Q00534;Q96Q40;O94921;Q07002;Q00536;Q00537;Q14004;B5BU53;B2R9L6;A0A024R880;P50750;A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9;A0A024R8R3;Q00526;K7EJ83;F8VZZ0;F8VZ51;Q6LC83;A0A024RBB6;P11802;F8VXD2;F8VYH9;F8VTV8;F8VWX7;Q9NYV4 A0A024QZP7;B5BU53;A0A024RB10;F8VZZ0;Q9NYV4 A0A024QZP7 CDC2;CDK1;DKFZp686L20222;CDK3;PCTK3;CDK16;CDK13;CDK14;PCTK1;CDK17;PCTK2;CDK12;CDC2L5;CDK6;CDK15;CDK18;CDK9;CDK2;CDK4 Cyclin-dependent kinase 1;Cyclin-dependent kinase 6;Cyclin-dependent kinase 15;Cyclin-dependent kinase 14;Cyclin-dependent kinase 18;Cyclin-dependent kinase 16;Cyclin-dependent kinase 17;Cyclin-dependent kinase 13;Cyclin-dependent kinase 9;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3;Cyclin-dependent kinase 4;Cyclin-dependent kinase 12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 431.7426 2 431.742702 861.470852 90641.16 -0.30758 -0.0001328 0.2922 0.00012616 -0.01538 -6.6404E-06 431.742723923715 436.746852596988 77.346 1.0624 77.346 76.972 78.034 0 318 73 6 0 0 0 0.012693 1 41426 67.032 0 1 1.4008 1.1531 0 11785000 4992100 6792400 19467 25;318;331;243;2085 7343 7513 30477 30477 LADFGLAR 8 0 1 Unmodified _LADFGLAR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6;K7ELV5;B3KX76;Q8IWB3;H0YAZ9;Q9BWF9;Q9BVE2;E7EUK8;B4DK59;B4DHU6;B4DER5;E5RGN0;Q96GA5;A0A087X209;Q59G02;Q9BRL4;A0A087WZU2;F5H6Z0;B4DGP5;A0A024R996;A0A140VK97;A0A024R183;B4DK03;A0A024R980;A0A024RBH0;B7Z8T0;J3QSD7;A0A024RA66;A0A024RA85;Q00534;Q96Q40;O94921;Q07002;Q00536;Q00537;Q14004;B5BU53;B2R9L6;A0A024R880;P50750;A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9;A0A024R8R3;Q00526;K7EJ83;F8VZZ0;F8VZ51;Q6LC83;A0A024RBB6;P11802;F8VXD2;F8VYH9;F8VTV8;F8VWX7;Q9NYV4 A0A024QZP7;B5BU53;A0A024RB10;F8VZZ0;Q9NYV4 A0A024QZP7 CDC2;CDK1;DKFZp686L20222;CDK3;PCTK3;CDK16;CDK13;CDK14;PCTK1;CDK17;PCTK2;CDK12;CDC2L5;CDK6;CDK15;CDK18;CDK9;CDK2;CDK4 Cyclin-dependent kinase 1;Cyclin-dependent kinase 6;Cyclin-dependent kinase 15;Cyclin-dependent kinase 14;Cyclin-dependent kinase 18;Cyclin-dependent kinase 16;Cyclin-dependent kinase 17;Cyclin-dependent kinase 13;Cyclin-dependent kinase 9;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3;Cyclin-dependent kinase 4;Cyclin-dependent kinase 12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 431.7425 2 431.742702 861.470852 92305.89 -0.13837 -5.9739E-05 0.23247 0.00010037 0.094101 4.0627E-05 431.742718006909 436.746796042981 77.621 0.92986 77.621 77.195 78.125 0 278 61 8 0 0 0 0.038748 2 40651 47.849 0 1 1.3689 1.1103 0 11989000 5253200 6735800 19468 25;318;331;243;2085 7343 7513 30478;30479 30479 LADFGVAGQLTDTQIK 16 1 0 Unmodified _LADFGVAGQLTDTQIK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;B4DMR0;H0Y630;B4DR80;Q6P0Y1;Q5U0E6;B4DT57;Q9Y6E0;C9JJV0;C9JDH9;C9J6L2;C9JCC0;C9J232;H7C279;Q5CZ67;B4E185;B4DMA5;B3KRS6;A0A0S2Z4Y2;B4DVS7;Q96BA2;A0A024R4B2;O00506 Q8NBY1 Q8NBY1 STK26;MST4;STK24;HEL-S-95;STK25;DKFZp686J1430 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 25 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 842.9531 2 838.946327 1675.8781 NaN NaN NaN -0.28724 -0.00024098 NaN NaN NaN NaN 100.3 0.68626 100.3 99.959 100.64 7.6294E-06 0 0 0 0.0028077 1 61309 58.674 52.571 1 NaN NaN 0 23892000 0 23892000 19469 1065 7344 7514 30480 30480 LADFGVAGQLTDTQIK 16 1 0 Unmodified _LADFGVAGQLTDTQIK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;B4DMR0;H0Y630;B4DR80;Q6P0Y1;Q5U0E6;B4DT57;Q9Y6E0;C9JJV0;C9JDH9;C9J6L2;C9JCC0;C9J232;H7C279;Q5CZ67;B4E185;B4DMA5;B3KRS6;A0A0S2Z4Y2;B4DVS7;Q96BA2;A0A024R4B2;O00506 Q8NBY1 Q8NBY1 STK26;MST4;STK24;HEL-S-95;STK25;DKFZp686J1430 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 25 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.946 2 838.946327 1675.8781 NaN NaN NaN -0.086238 -7.2349E-05 NaN NaN NaN NaN 100.11 0.086533 100.11 100.07 100.15 0 0 0 0 0.0050304 1 61355 53.754 29.244 1 NaN NaN 0 4370400 4370400 0 19470 1065 7344 7514 30481 30481 LADFGVAGQLTDTQIK 16 1 0 Unmodified _LADFGVAGQLTDTQIK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;B4DMR0;H0Y630;B4DR80;Q6P0Y1;Q5U0E6;B4DT57;Q9Y6E0;C9JJV0;C9JDH9;C9J6L2;C9JCC0;C9J232;H7C279;Q5CZ67;B4E185;B4DMA5;B3KRS6;A0A0S2Z4Y2;B4DVS7;Q96BA2;A0A024R4B2;O00506 Q8NBY1 Q8NBY1 STK26;MST4;STK24;HEL-S-95;STK25;DKFZp686J1430 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 25 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.4542 2 838.946327 1675.8781 NaN NaN NaN 0.015406 1.2925E-05 NaN NaN NaN NaN 99.615 0.63178 99.615 99.337 99.968 0 0 0 0 4.3348E-13 1 62351 116.03 116.03 1 NaN NaN 0 28964000 0 28964000 19471 1065 7344 7514 30482 30482 LADFGVAGQLTDTQIK 16 1 0 Unmodified _LADFGVAGQLTDTQIK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;B4DMR0;H0Y630;B4DR80;Q6P0Y1;Q5U0E6;B4DT57;Q9Y6E0;C9JJV0;C9JDH9;C9J6L2;C9JCC0;C9J232;H7C279;Q5CZ67;B4E185;B4DMA5;B3KRS6;A0A0S2Z4Y2;B4DVS7;Q96BA2;A0A024R4B2;O00506 Q8NBY1 Q8NBY1 STK26;MST4;STK24;HEL-S-95;STK25;DKFZp686J1430 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 842.9534 2 838.946327 1675.8781 67016.82 0.85571 0.00071789 -0.80671 -0.00067679 0.048998 4.1107E-05 838.946346942828 842.952780165575 112.76 0.43399 112.76 112.52 112.95 0 120 20 10 0 0 0 0.0027457 2 65493 44.426 44.426 1 1.4059 1.1228 0 6957300 3335100 3622200 19472 1065 7344 7514 30483;30484 30483 LADFGVAGQLTDTQIK 16 1 0 Unmodified _LADFGVAGQLTDTQIK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;B4DMR0;H0Y630;B4DR80;Q6P0Y1;Q5U0E6;B4DT57;Q9Y6E0;C9JJV0;C9JDH9;C9J6L2;C9JCC0;C9J232;H7C279;Q5CZ67;B4E185;B4DMA5;B3KRS6;A0A0S2Z4Y2;B4DVS7;Q96BA2;A0A024R4B2;O00506 Q8NBY1 Q8NBY1 STK26;MST4;STK24;HEL-S-95;STK25;DKFZp686J1430 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 843.4551 2 838.946327 1675.8781 68269.84 0.6833 0.00057325 -0.41762 -0.00035036 0.26568 0.00022289 838.94664150461 842.953024186749 112.63 0.55045 112.63 112.36 112.91 0 129 27 9 0 0 0 0.00026288 2 64537 56.956 56.956 1 1.3178 1.0725 0 6961800 3217300 3744400 19473 1065 7344 7514 30485;30486 30485 LADFGVLHR 9 0 1 Unmodified _LADFGVLHR_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 346.5312 3 343.194298 1026.56106 107193.9 0.13647 4.6834E-05 -0.065624 -2.2522E-05 0.070842 2.4312E-05 343.194333933884 346.530256572666 59.634 0.43922 59.634 59.457 59.896 -3.8147E-06 103 38 4 0 0 0 0.015754 1 34672 31.422 6.6462 1 2.1211 2.1243 0 9124200 2636700 6487500 19474 892 7345 7515 30487 30487 LADMHSTEISLQQR 14 0 1 Oxidation (M) _LADM(ox)HSTEISLQQR_ LADM(1)HSTEISLQQR LADM(43.6)HSTEISLQQR 0 1 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.9094 2 822.904136 1643.79372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.394 1 39.394 38.894 39.894 0 0 0 0 0.012204 1 20423 43.604 29.159 1 19475 39 7346 7516 30488 30488 21 LADPVTPVETILQR 14 0 1 Unmodified _LADPVTPVETILQR_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.4472 2 776.44068 1550.86681 72714.95 1.2085 0.00093834 -0.17605 -0.00013669 1.0325 0.00080164 776.440210204484 781.946393102395 111.48 0.40482 111.48 111.28 111.68 0 92 29 4 0 0 0 0.0082632 2 70109 42.843 42.843 1 0.90927 0.95634 0 11324000 5812200 5512300 19476 291 7347 7517 30489;30490 30490 LADPVTPVETILQR 14 0 1 Unmodified _LADPVTPVETILQR_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.4449 2 776.44068 1550.86681 72143.45 0.63386 0.00049215 0.098701 7.6635E-05 0.73256 0.00056879 776.440682228816 781.444846358713 110.87 0.45432 110.87 110.66 111.12 0 115 33 6 0 0 0 0.0050302 2 71359 47.559 47.559 1 1.1469 1.1573 0 5934100 2318000 3616100 19477 291 7347 7517 30491;30492 30491 LADPVTPVETILQR 14 0 1 Unmodified _LADPVTPVETILQR_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 781.9468 2 776.44068 1550.86681 70002.56 1.0178 0.00079027 0.11201 8.6968E-05 1.1298 0.00087724 776.44111342065 781.444633828116 122.7 0.42442 122.7 122.5 122.93 0 89 20 7 0 0 0 0.050197 1 73263 30.068 30.068 1 0.73846 0.61734 0 3534300 1713400 1820900 19478 291 7347 7517 30493 30493 LADPVTPVETILQR 14 0 1 Unmodified _LADPVTPVETILQR_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.9445 2 776.44068 1550.86681 70967.46 0.97196 0.00075467 0.23939 0.00018588 1.2114 0.00094055 776.440948684045 781.44473227047 122.54 0.42076 122.54 122.32 122.74 0 86 19 6 0 0 0 0.0097383 2 72192 36.847 36.847 1 0.93405 0.79876 0 2873300 1559300 1314000 19479 291 7347 7517 30494;30495 30494 LAEAEQMALMGSR 13 0 1 2 Oxidation (M) _LAEAEQM(ox)ALM(ox)GSR_ LAEAEQM(1)ALM(1)GSR LAEAEQM(58.68)ALM(58.68)GSR 0 2 0 B3KP05;Q9Y2K3 B3KP05 B3KP05 MYH15 Myosin-15 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.839 2 719.836876 1437.6592 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.982 1 45.982 45.482 46.482 0 0 0 0 0.0039689 1 25302 58.676 9.8799 1 19480 919 7348 7518 30496 30496 752;753 LAEDAPNFDGPAAEGQPGQK 20 1 0 Unmodified _LAEDAPNFDGPAAEGQPGQK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1010.4814 2 1006.47143 2010.9283 61311.28 0.29349 0.00029539 0.44336 0.00044623 0.73685 0.00074162 1006.47167688339 1010.47900651279 61.886 0.58036 61.886 61.628 62.209 0 262 46 8 0 0 0 1.1848E-05 3 35319 49.31 49.31 1 2.1765 2.3154 0 31758000 9224900 22533000 19481 1054 7349 7519 30497;30498;30499 30497 LAEDAPNFDGPAAEGQPGQK 20 1 0 Unmodified _LAEDAPNFDGPAAEGQPGQK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1006.9731 2 1006.47143 2010.9283 60930.8 0.34837 0.00035063 0.22503 0.00022649 0.57341 0.00057712 1006.97316984601 1010.98006838713 61.043 0.61319 61.043 60.739 61.353 0 228 60 6 0 0 0 2.1363E-06 2 35669 69.258 69.258 1 2.1533 2.276 0 23622000 9598600 14024000 19482 1054 7349 7519 30500;30501 30501 LAEDAPNFDGPAAEGQPGQK 20 1 0 Unmodified _LAEDAPNFDGPAAEGQPGQK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1010.9805 2 1006.47143 2010.9283 60311.52 0.076417 7.6911E-05 0.77098 0.00077597 0.8474 0.00085288 1006.97376153121 1010.98053212634 71.501 0.52504 71.501 71.27 71.795 0 192 37 7 0 0 0 0.0074258 1 37819 24.72 21.683 1 1.7428 1.382 0 4353200 1670100 2683100 19483 1054 7349 7519 30502 30502 LAEDAPNFDGPAAEGQPGQK 20 1 0 Unmodified _LAEDAPNFDGPAAEGQPGQK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1010.9855 2 1006.47143 2010.9283 61730.23 -0.11785 -0.00011861 0.66288 0.00066717 0.54503 0.00054856 1006.47187787967 1010.47939274468 72.188 0.4725 72.188 71.876 72.348 7.6294E-06 131 37 5 0 0 0 0.028263 1 37400 32.925 32.925 1 1.9204 1.5616 0 4509900 1994800 2515100 19484 1054 7349 7519 30503 30503 LAEDEAFQR 9 0 1 Unmodified _LAEDEAFQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.7656 2 539.76182 1077.50909 NaN NaN NaN -1.9047 -0.0010281 NaN NaN NaN NaN 36.392 0.5508 36.392 36.092 36.643 0 0 0 0 0.021651 1 18682 57.59 25.655 1 NaN NaN 0 16594000 0 16594000 19485 1754 7350 7520 30504 30504 LAEDEGDSEPEAVGQSR 17 0 1 Unmodified _LAEDEGDSEPEAVGQSR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.9038 2 894.897759 1787.78097 NaN NaN NaN -0.084373 -7.5505E-05 NaN NaN NaN NaN 33.95 0.62609 33.95 33.734 34.36 3.8147E-06 0 0 0 9.3693E-05 1 16833 69.602 60.647 1 NaN NaN 0 42842000 0 42842000 19486 2103 7351 7521 30505 30505 LAEDEGDSEPEAVGQSR 17 0 1 Unmodified _LAEDEGDSEPEAVGQSR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.9032 2 894.897759 1787.78097 NaN NaN NaN 0.27076 0.0002423 NaN NaN NaN NaN 33.346 0.54224 33.346 33.118 33.66 0 0 0 0 1.2326E-18 1 16574 119.39 107.03 1 NaN NaN 0 58922000 0 58922000 19487 2103 7351 7521 30506 30506 LAEDEGDSEPEAVGQSR 17 0 1 Unmodified _LAEDEGDSEPEAVGQSR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.8984 2 894.897759 1787.78097 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.397 1 33.397 32.897 33.897 0 0 0 0 0.00034028 1 16726 71.548 58.54 1 19488 2103 7351 7521 30507 30507 LAEDEGDSEPEAVGQSR 17 0 1 Unmodified _LAEDEGDSEPEAVGQSR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 899.3657 2 894.897759 1787.78097 64447.46 0.17827 0.00015953 0.31977 0.00028616 0.49804 0.0004457 894.897977467153 899.902226214345 39.51 0.88705 39.51 39.151 40.038 0 326 69 9 0 0 0 0.028129 1 18222 37.613 21.36 1 29.81 25.381 0 35578000 1212500 34366000 19489 2103 7351 7521 30508 30508 LAEDEGDSEPEAVGQSR 17 0 1 Unmodified _LAEDEGDSEPEAVGQSR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 899.9022 2 894.897759 1787.78097 64567.43 -0.017967 -1.6078E-05 0.59078 0.00052868 0.57281 0.00051261 894.897826379486 899.902414694653 39.822 1.0203 39.822 39.505 40.525 0 334 84 8 0 0 0 0.00066001 1 17617 46.318 46.318 1 28.592 24.925 0 25233000 1222800 24010000 19490 2103 7351 7521 30509 30509 LAEDVVTFQTLPPQR 15 0 1 Unmodified _LAEDVVTFQTLPPQR_ 0 0 0 A8K5Y7;Q9HAV4 A8K5Y7 A8K5Y7 XPO5 Exportin-5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.465 2 857.462144 1712.90974 NaN NaN NaN -0.31696 -0.00027178 NaN NaN NaN NaN 96.465 0.47235 96.465 96.203 96.675 0 0 0 0 0.0089439 1 60042 51.998 40.786 1 NaN NaN 0 9209100 0 9209100 19491 754 7352 7522 30510 30510 LAEIGAPIQGNR 12 0 1 Unmodified _LAEIGAPIQGNR_ 0 0 0 Q13435;Q7Z3K9;E9PPJ0;E9PJ04;H0YCG1;E9PJT3 Q13435 Q13435 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.8514 2 619.846219 1237.67788 78515.79 0.93916 0.00058214 0.54741 0.00033931 1.4866 0.00092145 619.846079440771 624.850893473322 59.504 0.25017 59.504 59.337 59.587 0 48 18 4 0 0 0 0.00022203 1 33894 95.775 54.893 1 1.2697 1.2897 0 15020000 5739700 9280400 19492 1713 7353 7523 30511 30511 LAELEEALQK 10 1 0 Unmodified _LAELEEALQK_ 0 0 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.3171 2 572.316428 1142.6183 NaN NaN NaN 0.92613 0.00053004 NaN NaN NaN NaN 71.14 1.3617 71.14 70.882 72.244 0 0 0 0 0.00010339 1 41395 96.331 54.7 1 NaN NaN 0 80028000 80028000 0 + 19493 1162 7354 7524 30512 30512 LAELEGALQK 10 1 0 Unmodified _LAELEGALQK_ 0 0 0 A0JNT2;CON__Q61726;A0A087X106;CON__O43790;B4DN72;A8K872;CON__Q6NT21;CON__P78385;CON__Q14533;O43790;P78385;Q14533;Q8NFV1;Q8NFV0;Q6YFL4;Q6YFL2;Q8N120;F5GYI5;B7Z7N3;CON__P78386;A6NCN2;P78386 A0JNT2 A0JNT2 KRT83;KRT81;KRT86;KRTHB6;KRTHB1;KRT85;KRT87P Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb3;Keratin, type II cuticular Hb1;Putative keratin-87 protein;Keratin, type II cuticular Hb5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.3125 2 536.305864 1070.59717 83825.2 0.3195 0.00017135 -0.45147 -0.00024212 -0.13197 -7.0775E-05 536.305314815906 540.312894726777 52.896 0.54485 52.896 52.631 53.176 0 155 44 5 0 0 0 0.0022766 1 30329 69.825 1.8085 1 0.78526 0.81295 0 18656000 9548100 9107900 + 19494 447 7355 7525 30513 30513 LAELLTQQHGLQCR 14 0 1 Unmodified _LAELLTQQHGLQCR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.2949 3 556.294634 1665.86207 81396.86 0.49477 0.00027524 -0.18125 -0.00010083 0.31351 0.00017441 556.294618337963 559.630652270942 61.698 0.89613 61.698 61.312 62.209 3.8147E-06 370 72 8 0 0 0 1.5042E-05 2 35469 75.669 74.769 1 1.0096 1.0831 0 46405000 23137000 23269000 19495 2038 7356 7526 30514;30515 30515 LAELLTQQHGLQCR 14 0 1 Unmodified _LAELLTQQHGLQCR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.2946 3 556.294634 1665.86207 80965.98 0.47376 0.00026355 -0.12666 -7.046E-05 0.3471 0.00019309 556.294720767341 559.630855789208 60.062 0.86793 60.062 59.765 60.633 3.8147E-06 278 58 8 0 0 0 8.1948E-07 2 34937 81.904 73.107 1 1.0322 1.1685 0 47847000 21089000 26757000 19496 2038 7356 7526 30516;30517 30516 LAELLTQQHGLQCR 14 0 1 Unmodified _LAELLTQQHGLQCR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.2951 3 556.294634 1665.86207 81185.41 0.15082 8.3903E-05 0.32877 0.00018289 0.4796 0.0002668 556.629073556352 559.630961841483 70.801 0.86126 70.801 70.555 71.417 0 299 57 8 0 0 0 9.4762E-06 2 37216 84.566 66.202 1 1.4376 1.2009 0 10414000 4317200 6097300 19497 2038 7356 7526 30518;30519 30519 LAELLTQQHGLQCR 14 0 1 Unmodified _LAELLTQQHGLQCR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.6313 3 556.294634 1665.86207 81388.23 0.11177 6.2177E-05 0.55656 0.00030961 0.66833 0.00037179 556.294941038592 559.631224897414 71.169 0.82236 71.169 70.91 71.733 7.6294E-06 254 53 8 0 0 0 0.00022104 1 36599 58.831 58.831 1 1.4729 1.2146 0 8304300 2835000 5469300 19498 2038 7356 7526 30520 30520 LAELQEQLK 9 1 0 Unmodified _LAELQEQLK_ 0 0 0 O60885;A0A024R7H8;Q6PIS5;Q6NXE4;Q05BM2;Q5BJ26;M0QZD9;W8JJB1;A0A024R8H6;Q15059;B4DS09;A0A140F1N4 O60885;A0A024R8H6 O60885 BRD4;BRD3 Bromodomain-containing protein 4;Bromodomain-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.3132 2 536.305864 1070.59717 86613.73 0.37455 0.00020088 -0.32954 -0.00017673 0.045018 2.4143E-05 536.305256087171 540.313067796656 62.515 0.49616 62.515 62.193 62.69 -3.8147E-06 109 38 4 0 0 0 0.027097 1 32157 47.198 9.1114 1 1.1128 0.92708 0 1768600 772840 995750 19499 1399;249 7357 7527 30521 30521 LAELQEQLR 9 0 1 Unmodified _LAELQEQLR_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.8104 2 550.308938 1098.60332 81370.3 0.73556 0.00040478 -0.32035 -0.00017629 0.41521 0.00022849 550.308813199954 555.312401128432 56.357 0.46535 56.357 56.175 56.64 0 152 41 5 0 0 0 0.0018407 1 31710 80.165 29.462 1 0.55892 0.57789 0 23508000 13705000 9803100 19500 367 7358 7528 30522 30522 LAELQEQLR 9 0 1 Unmodified _LAELQEQLR_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.309 2 550.308938 1098.60332 84294.23 0.37122 0.00020429 -0.96925 -0.00053339 -0.59802 -0.0003291 550.30839656151 555.312201121992 55.462 0.4888 55.462 55.193 55.682 0 104 34 5 0 0 0 0.00035885 2 31799 100.84 42.12 1 0.46027 0.45874 0 16558000 11515000 5042900 19501 367 7358 7528 30523;30524 30523 LAELSDYR 8 0 1 Unmodified _LAELSDYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7522 2 483.748182 965.481811 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.465 1 47.465 46.965 47.965 0 0 0 0 0.0053714 1 25747 84.568 21.42 1 19502 571 7359 7529 30525 30525 LAELSDYR 8 0 1 Unmodified _LAELSDYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.7485 2 483.748182 965.481811 88711.8 0.4797 0.00023206 0.23205 0.00011225 0.71175 0.00034431 483.74817556815 488.752279316105 46.387 0.72536 46.387 46.109 46.834 -3.8147E-06 184 57 7 0 0 0 0.0090807 2 25523 75.854 56.367 1 1.3756 1.5389 0 44810000 19196000 25614000 19503 571 7359 7529 30526;30527 30526 LAEMPADSGYPAYLGAR 17 0 1 Oxidation (M) _LAEM(ox)PADSGYPAYLGAR_ LAEM(1)PADSGYPAYLGAR LAEM(45.92)PADSGYPAYLGAR 0 1 0 P38606;B7Z2V6 P38606 P38606 ATP6V1A V-type proton ATPase catalytic subunit A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.4312 2 899.427444 1796.84033 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.976 1 76.976 76.476 77.476 0 0 0 0 0.0039157 1 45434 45.915 28.973 1 19504 1553 7360 7530 30528 30528 1308 LAEMPADSGYPAYLGAR 17 0 1 Oxidation (M) _LAEM(ox)PADSGYPAYLGAR_ LAEM(1)PADSGYPAYLGAR LAEM(42.84)PADSGYPAYLGAR 0 1 0 P38606;B7Z2V6 P38606 P38606 ATP6V1A V-type proton ATPase catalytic subunit A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.4305 2 899.427444 1796.84033 NaN NaN NaN -0.96501 -0.00086796 NaN NaN NaN NaN 76.096 0.090057 76.096 76.027 76.117 0 0 0 0 0.00317 1 45876 42.843 29.18 1 NaN NaN 0 2618600 0 2618600 19505 1553 7360 7530 30529 30529 1308 LAEMSLEQDNIK 12 1 0 Oxidation (M) _LAEM(ox)SLEQDNIK_ LAEM(1)SLEQDNIK LAEM(74.84)SLEQDNIK 0 1 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.8539 2 703.845224 1405.6759 NaN NaN NaN 0.092264 6.494E-05 NaN NaN NaN NaN 47.273 0.63047 47.273 47.041 47.671 0 0 0 0 0.00053573 1 25767 74.841 45.368 1 NaN NaN 0 15511000 0 15511000 19506 2150 7361 7531 30530 30530 2001 LAEMSLEQDNIK 12 1 0 Oxidation (M) _LAEM(ox)SLEQDNIK_ LAEM(1)SLEQDNIK LAEM(50.29)SLEQDNIK 0 1 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.8458 2 703.845224 1405.6759 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.075 1 46.075 45.575 46.575 0 0 0 0 0.010094 1 25371 50.292 19.219 1 19507 2150 7361 7531 30531 30531 2001 LAENIDAQLK 10 1 0 Unmodified _LAENIDAQLK_ 0 0 0 M0QXN5;A0A024QZF1;P37198 M0QXN5 M0QXN5 NUP62;hCG_19665 Nuclear pore glycoprotein p62 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.8083 2 557.808771 1113.60299 NaN NaN NaN -0.54395 -0.00030342 NaN NaN NaN NaN 56.533 0.31216 56.533 56.413 56.725 0 0 0 0 0.00086727 1 31859 89.08 53.568 1 NaN NaN 0 5470200 5470200 0 19508 19 7362 7532 30532 30532 LAENIDAQLK 10 1 0 Unmodified _LAENIDAQLK_ 0 0 0 M0QXN5;A0A024QZF1;P37198 M0QXN5 M0QXN5 NUP62;hCG_19665 Nuclear pore glycoprotein p62 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.816 2 557.808771 1113.60299 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.51 1 56.51 56.01 57.01 0 0 0 0 4.1197E-05 1 31827 89.08 30.484 1 19509 19 7362 7532 30533 30533 LAEPQLR 7 0 1 Unmodified _LAEPQLR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.7427 2 413.742702 825.470852 92873.24 0.0063898 2.6437E-06 -0.04112 -1.7013E-05 -0.03473 -1.4369E-05 413.742576580274 418.746716404676 39.676 0.55291 39.676 39.45 40.002 0 233 46 7 0 0 0 0.016896 2 20532 97.596 50.933 1 0.58854 0.65293 0 67958000 44366000 23592000 19510 118;1184 7363 7533 30534;30535 30535 LAEPQLR 7 0 1 Unmodified _LAEPQLR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.7421 2 413.742702 825.470852 94429.52 0.05649 2.3372E-05 -0.71361 -0.00029525 -0.65712 -0.00027188 413.742056271599 418.746583108561 38.712 0.67699 38.712 38.396 39.073 3.8147E-06 225 57 7 0 0 0 0.027041 1 20295 86.086 43.086 1 0.56432 0.65049 0 72577000 40321000 32256000 19511 118;1184 7363 7533 30536 30536 LAEPYGK 7 1 0 Unmodified _LAEPYGK_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;Q9H4N1;D6RBK5 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.2175 2 389.210704 776.406855 NaN NaN NaN -0.12879 -5.0126E-05 NaN NaN NaN NaN 23.841 0.46224 23.841 23.575 24.038 0 0 0 0 0.031121 1 9625 69.383 14.858 1 NaN NaN 0 28530000 0 28530000 19512 542 7364 7534 30537 30537 LAESLLALSQQEELADLPK 19 1 0 Unmodified _LAESLLALSQQEELADLPK_ 0 0 0 Q9BVJ6 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1039.0721 2 1034.56225 2067.10995 60106.63 0.67417 0.00069747 0.23065 0.00023862 0.90482 0.00093609 1035.06417638679 1039.07075369162 120.04 0.59557 120.04 119.85 120.44 -7.6294E-06 282 40 10 0 0 0 9.5666E-31 2 77250 190.1 190.1 1 1.1204 1.2676 0 86944000 41748000 45196000 19513 2008 7365 7535 30538;30539 30538 LAESLLALSQQEELADLPK 19 1 0 Unmodified _LAESLLALSQQEELADLPK_ 0 0 0 Q9BVJ6 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1038.5693 2 1034.56225 2067.10995 60371.37 0.51955 0.0005375 0.25218 0.0002609 0.77173 0.0007984 1035.06426157643 1039.07079964401 119.6 0.54521 119.6 119.37 119.92 7.6294E-06 295 39 10 0 0 0 1.1943E-16 2 78769 153.81 153.81 1 1.0425 1.1679 0 111460000 50683000 60779000 19514 2008 7365 7535 30540;30541 30540 LAESLLALSQQEELADLPK 19 1 0 Unmodified _LAESLLALSQQEELADLPK_ 0 0 0 Q9BVJ6 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1035.0671 2 1034.56225 2067.10995 59891.95 0.90581 0.00093711 0.026204 2.711E-05 0.93201 0.00096422 1035.06393001673 1038.56925165284 132.55 1.0179 132.55 132.36 133.37 0 240 47 11 0 0 0 1.3092E-05 2 80567 95.981 95.981 1 1.5817 1.3269 0 52444000 19345000 33099000 19515 2008 7365 7535 30542;30543 30543 LAESLLALSQQEELADLPK 19 1 0 Unmodified _LAESLLALSQQEELADLPK_ 0 0 0 Q9BVJ6 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1039.0737 2 1034.56225 2067.10995 60295.69 0.97608 0.0010098 -0.24404 -0.00025247 0.73204 0.00075734 1035.06350874467 1038.56902491591 132.37 0.67242 132.37 132.16 132.83 0 200 27 11 0 0 0 9.6417E-09 2 79516 125.61 125.61 1 1.5705 1.3251 0 55385000 21485000 33900000 19516 2008 7365 7535 30544;30545 30544 LAESLSSDPEVLLQIDGVTEDK 22 1 0 Unmodified _LAESLSSDPEVLLQIDGVTEDK_ 0 0 0 B2RAN0;P54132;B7ZKN7;B7Z2X2;B7Z8C1 B2RAN0 B2RAN0 BLM Bloom syndrome protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1179.5996 2 1179.59976 2357.18497 NaN NaN NaN 0.59428 0.00070101 NaN NaN NaN NaN 120.93 0.24523 120.93 120.85 121.09 0 0 0 0 0.014719 1 78117 31.389 26.11 1 NaN NaN 0 5397400 5397400 0 19517 873 7366 7536 30546 30546 LAETQEEISAEVAAK 15 1 0 Unmodified _LAETQEEISAEVAAK_ 0 0 0 B3KRR1;B3KSL5;A0A0A6YYJ8;Q9Y383 B3KRR1 B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.907 2 794.906867 1587.79918 69108.19 0.76886 0.00061117 -0.12974 -0.00010313 0.63912 0.00050804 794.90665756628 798.913637285719 61.847 0.59711 61.847 61.565 62.162 -3.8147E-06 224 55 6 0 0 0 2.1021E-15 2 36150 133.05 133.05 1 0.73504 0.74239 0 28520000 16487000 12034000 19518 494 7367 7537 30547;30548 30547 LAETQEEISAEVAAK 15 1 0 Unmodified _LAETQEEISAEVAAK_ 0 0 0 B3KRR1;B3KSL5;A0A0A6YYJ8;Q9Y383 B3KRR1 B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 794.9077 2 794.906867 1587.79918 69026.47 0.61405 0.00048811 -0.21813 -0.00017339 0.39592 0.00031472 794.906258989985 798.913828041675 72.984 0.65839 72.984 72.655 73.313 0 137 34 6 0 0 0 0.0096986 2 38522 35.737 35.737 1 0.4751 0.37502 0 3067100 2011000 1056000 19519 494 7367 7537 30549;30550 30549 LAETQEEISAEVAAK 15 1 0 Unmodified _LAETQEEISAEVAAK_ 0 0 0 B3KRR1;B3KSL5;A0A0A6YYJ8;Q9Y383 B3KRR1 B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 794.9073 2 794.906867 1587.79918 68379.05 0.64394 0.00051187 -0.21293 -0.00016926 0.43101 0.00034261 795.408111468776 798.913794669979 73.577 0.50566 73.577 73.303 73.809 7.6294E-06 131 32 5 0 0 0 0.0108 1 38051 34.779 34.779 1 0.52389 0.41158 0 3833700 2661400 1172300 19520 494 7367 7537 30551 30551 LAETVFNFQEK 11 1 0 Unmodified _LAETVFNFQEK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8488 2 663.340435 1324.66632 NaN NaN NaN 0.40151 0.00026634 NaN NaN NaN NaN 87.25 0.23413 87.25 87.163 87.398 -7.6294E-06 0 0 0 0.0035105 1 52674 67.334 42.558 1 NaN NaN 0 5944400 0 5944400 19521 1729 7368 7538 30552 30552 LAETVFNFQEK 11 1 0 Unmodified _LAETVFNFQEK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.3428 2 663.340435 1324.66632 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.3 1 87.3 86.8 87.8 0 0 0 0 0.0093513 1 52691 59.908 27.067 1 19522 1729 7368 7538 30553 30553 LAETVFNFQEK 11 1 0 Unmodified _LAETVFNFQEK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3497 2 663.340435 1324.66632 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.29 1 86.29 85.79 86.79 0 0 0 0 0.00040938 1 53190 76.943 41.498 1 19523 1729 7368 7538 30554 30554 LAEVEAALEK 10 1 0 Unmodified _LAEVEAALEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.8049 2 536.797872 1071.58119 86119.53 0.73467 0.00039437 -0.81485 -0.00043741 -0.080175 -4.3038E-05 536.797133664444 540.80467477371 59.75 0.36488 59.75 59.553 59.918 0 130 29 6 0 0 0 4.7667E-08 1 34038 116.3 46.881 1 1.0473 1.0258 0 21995000 10337000 11658000 19524 1754 7369 7539 30555 30555 LAEVEAALEK 10 1 0 Unmodified _LAEVEAALEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.8049 2 536.797872 1071.58119 84615.16 0.91443 0.00049086 -0.51813 -0.00027813 0.3963 0.00021273 536.796997719437 540.804879825891 58.598 0.30129 58.598 58.451 58.753 0 116 29 5 0 0 0 1.2036E-05 1 34040 103.7 47.266 1 1.2513 1.2653 0 28805000 14081000 14724000 19525 1754 7369 7539 30556 30556 LAEVTEEEWLSIPEVGDAR 19 0 1 Unmodified _LAEVTEEEWLSIPEVGDAR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1072.0341 2 1072.03132 2142.04808 59868.47 0.2624 0.0002813 0.73397 0.00078683 0.99636 0.0010681 1072.53259719572 1077.03714436143 118.63 0.4503 118.63 118.38 118.83 0 89 27 5 0 0 0 0.0048421 1 78122 49.333 37.168 1 0.81134 0.80082 0 12826000 5550200 7276100 19526 1418 7370 7540 30557 30557 LAFIDPATGK 10 1 0 Unmodified _LAFIDPATGK_ 0 0 0 Q9NSI6;H7BZR9;Q5R2U7;H7C409 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.791 2 516.78985 1031.56515 NaN NaN NaN -0.53644 -0.00027723 NaN NaN NaN NaN 79.474 0.59018 79.474 79.17 79.76 7.6294E-06 0 0 0 0.038757 1 47072 49.715 22.461 1 NaN NaN 0 4907100 4907100 0 19527 2068 7371 7541 30558 30558 LAFIDPATGK 10 1 0 Unmodified _LAFIDPATGK_ 0 0 0 Q9NSI6;H7BZR9;Q5R2U7;H7C409 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.7899 2 516.78985 1031.56515 86575.6 0.16907 8.7374E-05 0.86464 0.00044684 1.0337 0.00053421 516.789801919078 520.797546119014 78.427 0.67094 78.427 78.048 78.719 0 172 58 4 0 0 0 0.0032667 2 47449 65.305 65.305 1 1.7499 1.8667 0 23176000 8502400 14674000 19528 2068 7371 7541 30559;30560 30559 LAFIDPATGK 10 1 0 Unmodified _LAFIDPATGK_ 0 0 0 Q9NSI6;H7BZR9;Q5R2U7;H7C409 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.7972 2 516.78985 1031.56515 91286.88 0.26435 0.00013662 0.1294 6.6873E-05 0.39376 0.00020349 516.789876780288 520.796931189836 90.186 0.55391 90.186 89.939 90.493 7.6294E-06 115 40 4 0 0 0 0.055642 1 49875 35.511 35.511 1 1.7811 1.4872 0 1804600 602600 1202000 19529 2068 7371 7541 30561 30561 LAFLDPDTGK 10 1 0 Unmodified _LAFLDPDTGK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.7847 2 538.784764 1075.55498 83145.82 0.40932 0.00022054 0.39661 0.00021369 0.80593 0.00043422 538.784866850972 542.792006707691 81.259 1.0542 81.259 80.845 81.899 0 431 90 7 0 0 0 0.00050835 2 48303 85.731 76.827 1 0.81008 0.91777 0 98528000 54005000 44524000 19530 1942 7372 7542 30562;30563 30563 LAFLDPDTGK 10 1 0 Unmodified _LAFLDPDTGK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.785 2 538.784764 1075.55498 82884.06 0.67899 0.00036583 0.1637 8.8201E-05 0.84269 0.00045403 538.784750548816 542.791926020947 80.192 0.97744 80.192 79.794 80.771 0 373 77 9 0 0 0 5.2324E-06 2 48762 108.81 84.653 1 0.78434 0.88069 0 116230000 68836000 47390000 19531 1942 7372 7542 30564;30565 30565 LAFLDPDTGK 10 1 0 Unmodified _LAFLDPDTGK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.7848 2 538.784764 1075.55498 83212.43 0.60826 0.00032772 -0.19361 -0.00010431 0.41466 0.00022341 538.784652600394 542.791683128072 92.163 1.1435 92.163 91.688 92.831 0 369 64 8 0 0 0 0.011008 2 51214 52.579 36.376 1 1.4228 1.1286 0 18836000 7670000 11166000 19532 1942 7372 7542 30566;30567 30567 LAFLDPDTGK 10 1 0 Unmodified _LAFLDPDTGK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.7919 2 538.784764 1075.55498 83070.86 0.40276 0.000217 0.0080497 4.337E-06 0.41081 0.00022134 538.784702439333 542.791818261699 92.086 1.2273 92.086 91.582 92.809 7.6294E-06 350 69 8 0 0 0 0.010458 2 50153 53.327 36.551 1 1.4876 1.1953 0 16147000 6339300 9808200 19533 1942 7372 7542 30568;30569 30568 LAFLDPISGK 10 1 0 Unmodified _LAFLDPISGK_ 0 0 0 Q6RI45 Q6RI45 Q6RI45 BRWD3 Bromodomain and WD repeat-containing protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.8126 2 530.8055 1059.59645 NaN NaN NaN -0.54433 -0.00028893 NaN NaN NaN NaN 114.26 0.37643 114.26 114.08 114.45 0 0 0 0 0.052355 1 66719 46.158 19.556 1 NaN NaN 0 503040 0 503040 19534 1860 7373 7543 30570 30570 LAFLDPISGK 10 1 0 Unmodified _LAFLDPISGK_ 0 0 0 Q6RI45 Q6RI45 Q6RI45 BRWD3 Bromodomain and WD repeat-containing protein 3 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 534.8128 2 530.8055 1059.59645 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.06 1 114.06 113.56 114.56 0 0 0 0 0.042499 1 65651 46.158 17.646 1 19535 1860 7373 7543 30571 30571 LAFLNVQAAEEALPR 15 0 1 Unmodified _LAFLNVQAAEEALPR_ 0 0 0 B7Z601;Q53T76;A8K1Z2;A0A140VJK2;P43304 B7Z601 B7Z601 GPD2 Glycerol-3-phosphate dehydrogenase;Glycerol-3-phosphate dehydrogenase, mitochondrial MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.1 2 821.451579 1640.88861 69624.2 0.87723 0.0007206 -0.39657 -0.00032577 0.48066 0.00039484 821.450912152152 826.455854276122 118.18 0.39052 118.18 118 118.39 0 99 22 7 0 0 0 0.0088393 1 75738 53.569 53.569 1 1.3208 1.3325 0 9517900 4475500 5042400 19536 603 7374 7544 30572 30572 LAFLNVQAAEEALPR 15 0 1 Unmodified _LAFLNVQAAEEALPR_ 0 0 0 B7Z601;Q53T76;A8K1Z2;A0A140VJK2;P43304 B7Z601 B7Z601 GPD2 Glycerol-3-phosphate dehydrogenase;Glycerol-3-phosphate dehydrogenase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.4572 2 821.451579 1640.88861 NaN NaN NaN -0.86961 -0.00071434 NaN NaN NaN NaN 117.71 0.46021 117.71 117.42 117.88 0 0 0 0 4.5793E-11 1 77210 116.55 90.504 1 NaN NaN 0 7595100 0 7595100 19537 603 7374 7544 30573 30573 LAFPGETLSDIPCK 14 1 0 Unmodified _LAFPGETLSDIPCK_ 0 0 0 D6W625;Q13111 D6W625 D6W625 CHAF1A Chromatin assembly factor 1 subunit A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.3921 2 774.392341 1546.77013 NaN NaN NaN 0.2451 0.0001898 NaN NaN NaN NaN 102.53 0.32881 102.53 102.26 102.59 0 0 0 0 0.019825 1 63057 45.433 32.857 1 NaN NaN 0 4691800 4691800 0 19538 1204 7375 7545 30574 30574 LAFPGETLSDIPCK 14 1 0 Unmodified _LAFPGETLSDIPCK_ 0 0 0 D6W625;Q13111 D6W625 D6W625 CHAF1A Chromatin assembly factor 1 subunit A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.3933 2 774.392341 1546.77013 NaN NaN NaN 0.87984 0.00068134 NaN NaN NaN NaN 101.82 0.29789 101.82 101.63 101.92 -7.6294E-06 0 0 0 0.051914 1 64105 38.402 20.538 1 NaN NaN 0 5094100 5094100 0 19539 1204 7375 7545 30575 30575 LAFVIR 6 0 1 Unmodified _LAFVIR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036;C9JIJ5;C9JZ88 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 359.7342 2 359.734149 717.453745 99504.52 0.052589 1.8918E-05 0.020153 7.2496E-06 0.072742 2.6168E-05 359.73404794237 364.738176264877 78.535 1.9628 78.535 77.663 79.626 0 764 170 7 0 0 0 0.037498 2 46766 123.07 56.633 1 0.93943 1.1125 0 405960000 207590000 198370000 19540 240 7376 7546 30576;30577 30577 LAGANPAVITCDELLLGHEK 20 1 0 Unmodified _LAGANPAVITCDELLLGHEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.707 3 707.70514 2120.09359 72317.46 0.95212 0.00067382 -0.10146 -7.1805E-05 0.85066 0.00060201 708.039403924685 710.376633601576 100.96 0.97855 100.96 100.56 101.54 0 453 72 9 0 0 0 5.7694E-18 2 61913 115.76 115.76 1 0.75619 0.85533 0 86006000 48371000 37635000 19541 1665 7377 7547 30578;30579 30578 LAGANPAVITCDELLLGHEK 20 1 0 Unmodified _LAGANPAVITCDELLLGHEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.0402 3 707.70514 2120.09359 72385.42 0.70492 0.00049888 -0.19409 -0.00013736 0.51083 0.00036152 708.03938044257 710.710743939042 100.07 0.87542 100.07 99.642 100.52 -7.6294E-06 458 69 10 0 0 0 1.6891E-13 2 62676 107.45 107.45 1 0.76578 0.86214 0 70116000 41216000 28900000 19542 1665 7377 7547 30580;30581 30580 LAGANPAVITCDELLLGHEK 20 1 0 Unmodified _LAGANPAVITCDELLLGHEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.7061 3 707.70514 2120.09359 71320.79 1.0436 0.00073858 -0.12393 -8.7704E-05 0.91969 0.00065087 708.039477857083 710.376293602074 113.1 0.57233 113.1 112.89 113.46 -7.6294E-06 182 28 11 0 0 0 4.5147E-18 2 65766 117.84 117.84 1 0.38442 0.31479 0 35558000 26756000 8802600 19543 1665 7377 7547 30582;30583 30582 LAGANPAVITCDELLLGHEK 20 1 0 Unmodified _LAGANPAVITCDELLLGHEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.0402 3 707.70514 2120.09359 70892.07 0.66141 0.00046808 0.029355 2.0775E-05 0.69076 0.00048886 708.039639313378 710.710952677973 112.94 0.55351 112.94 112.71 113.26 0 190 26 10 0 0 0 4.6765E-07 2 64707 73.783 73.783 1 0.4013 0.33097 0 30138000 20755000 9382600 19544 1665 7377 7547 30584;30585 30584 LAGAQQVQTQIQVAK 15 1 0 Unmodified _LAGAQQVQTQIQVAK_ 0 0 0 Q96L91;A0A0A0MR70 Q96L91 Q96L91 EP400 E1A-binding protein p400 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.4506 2 791.949204 1581.88385 NaN NaN NaN 0.16139 0.00012781 NaN NaN NaN NaN 61.534 0.26949 61.534 61.427 61.697 0 0 0 0 0.00019438 2 35226 77.744 63.325 1 NaN NaN 0 3166400 3166400 0 19545 1977 7378 7548 30586;30587 30587 LAGASPATVAAAAAAGSGPK 20 1 0 Unmodified _LAGASPATVAAAAAAGSGPK_ 0 0 0 B4DIX0;Q13045;Q59H95;B4DNA8 B4DIX0 B4DIX0 FLII Protein flightless-1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.9515 2 819.944118 1637.87368 NaN NaN NaN 0.075191 6.1652E-05 NaN NaN NaN NaN 73.062 0.28011 73.062 72.889 73.169 0 0 0 0 5.1395E-05 2 43816 60.657 43.099 1 NaN NaN 0 6310100 0 6310100 19546 984 7379 7549 30588;30589 30588 LAGEELAGEEAPQEK 15 1 0 Unmodified _LAGEELAGEEAPQEK_ 0 0 0 Q7Z4V5;A0A087WX58;K7EPS6 Q7Z4V5 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.8833 2 785.883392 1569.75223 69689.77 0.57454 0.00045152 -0.010923 -8.5845E-06 0.56362 0.00044294 785.882941302051 789.890868618964 47.085 0.37996 47.085 46.813 47.193 3.8147E-06 101 33 5 0 0 0 0.00022014 1 26068 63.944 57.056 1 0.44633 0.45152 0 16444000 13202000 3241700 19547 1877 7380 7550 30590 30590 LAGELQLLLEEIK 13 1 0 Unmodified _LAGELQLLLEEIK_ 0 0 0 P49454;Q9UHT7;A0A087WTY4 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.9368 2 734.934699 1467.85485 71392.13 0.95242 0.00069997 0.20488 0.00015058 1.1573 0.00085054 734.935435006443 738.941755186055 132.46 1.2239 132.46 131.7 132.93 0 270 77 7 0 0 0 2.3097E-14 3 86588 136.96 136.96 1 1.0541 1.1007 0 11836000 6483600 5352100 19548 1581 7381 7551 30591;30592;30593 30592 LAGELQLLLEEIK 13 1 0 Unmodified _LAGELQLLLEEIK_ 0 0 0 P49454;Q9UHT7;A0A087WTY4 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.4362 2 734.934699 1467.85485 72030.99 0.97046 0.00071322 0.079831 5.867E-05 1.0503 0.00077189 734.935324591782 738.941646432848 132.03 0.79512 132.03 131.66 132.45 0 297 52 9 0 0 0 1.3035E-23 3 88452 155.97 141.93 1 0.98599 1.0091 0 17472000 9275500 8196000 19549 1581 7381 7551 30594;30595;30596 30596 LAGESESNLR 10 0 1 Unmodified _LAGESESNLR_ 0 0 0 V9HW80;P55072;Q96IF9;Q9HAP1 V9HW80 V9HW80 HEL-S-70;VCP Transitional endoplasmic reticulum ATPase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.2715 2 538.272552 1074.53055 NaN NaN NaN -0.14755 -7.9423E-05 NaN NaN NaN NaN 24.47 0.35339 24.47 24.314 24.668 1.9073E-06 0 0 0 0.0014915 1 10209 85.67 41.321 1 NaN NaN 0 5357400 5357400 0 19550 1613 7382 7552 30597 30597 LAGESESNLR 10 0 1 Unmodified _LAGESESNLR_ 0 0 0 V9HW80;P55072;Q96IF9;Q9HAP1 V9HW80 V9HW80 HEL-S-70;VCP Transitional endoplasmic reticulum ATPase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.2754 2 538.272552 1074.53055 NaN NaN NaN -2.4366 -0.0013116 NaN NaN NaN NaN 24.232 0.32642 24.232 24.034 24.36 0 0 0 0 0.010843 1 10008 62.463 12.873 1 NaN NaN 0 7265200 0 7265200 19551 1613 7382 7552 30598 30598 LAGLDITDATLR 12 0 1 Unmodified _LAGLDITDATLR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.8536 2 629.853709 1257.69287 77179.72 0.73855 0.00046518 0.04124 2.5975E-05 0.77979 0.00049115 629.853652371132 634.857834879838 99.785 0.78442 99.785 99.347 100.13 0 270 62 7 0 0 0 9.1081E-06 2 62692 108.47 52.903 1 0.52662 0.5564 0 23515000 15517000 7997600 19552 1323 7383 7553 30599;30600 30600 LAGLDITDATLR 12 0 1 Unmodified _LAGLDITDATLR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.8534 2 629.853709 1257.69287 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.13 1 100.13 99.634 100.63 0 0 0 0 0.0010164 1 62870 73.067 15.468 1 19553 1323 7383 7553 30601 30601 LAGLDITDATLR 12 0 1 Unmodified _LAGLDITDATLR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.854 2 629.853709 1257.69287 75435.79 0.87749 0.00055269 0.24842 0.00015647 1.1259 0.00070916 629.853593829027 634.857870300153 112.89 0.52684 112.89 112.63 113.15 0 100 23 6 0 0 0 7.0704E-06 3 65657 109.42 40.684 1 0.55441 0.46397 0 10256000 6558900 3697300 19554 1323 7383 7553 30602;30603;30604 30604 LAGLDITDATLR 12 0 1 Unmodified _LAGLDITDATLR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 629.8542 2 629.853709 1257.69287 76092.91 0.69294 0.00043645 -0.0076863 -4.8412E-06 0.68526 0.00043161 629.853718203438 634.857849770286 112.79 0.55804 112.79 112.5 113.06 -7.6294E-06 107 26 6 0 0 0 7.1571E-05 2 64629 97.456 28.722 1 0.6013 0.50023 0 7344600 4728800 2615900 19555 1323 7383 7553 30605;30606 30606 LAGLEEALQK 10 1 0 Unmodified _LAGLEEALQK_ 0 0 0 Q701L7;CON__Q9NSB4;Q9NSB4 Q701L7 Q701L7 KRTHB2;KRT82 Keratin, type II cuticular Hb2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.3077 2 536.305864 1070.59717 NaN NaN NaN -0.080659 -4.3258E-05 NaN NaN NaN NaN 69.415 0.66362 69.415 69.091 69.754 0 0 0 0 0.0014904 1 41265 85.676 41.327 1 NaN NaN 0 9892800 9892800 0 + 19556 1181 7384 7554 30607 30607 LAGLEYVLHFTALNGK 16 1 0 Unmodified _LAGLEYVLHFTALNGK_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.4905 2 873.482879 1744.95121 67264.75 0.69461 0.00060673 -0.083632 -7.3051E-05 0.61097 0.00053368 873.483082834551 877.489600100931 121.08 0.5493 121.08 120.75 121.3 0 147 37 5 0 0 0 0.0004078 1 78023 50.207 50.207 1 0.92734 0.96016 0 11183000 5506000 5676700 19557 773 7385 7555 30608 30608 LAGLEYVLHFTALNGK 16 1 0 Unmodified _LAGLEYVLHFTALNGK_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.3297 3 582.657678 1744.95121 79336.6 0.64681 0.00037687 -0.032242 -1.8786E-05 0.61457 0.00035808 582.657615655989 585.329052919341 121.04 0.69702 121.04 120.7 121.4 0 317 47 8 0 0 0 6.3029E-10 2 78031 125.73 125.73 1 0.93638 1.009 0 41140000 19108000 22032000 19558 773 7385 7555 30609;30610 30609 LAGLEYVLHFTALNGK 16 1 0 Unmodified _LAGLEYVLHFTALNGK_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.6639 3 582.657678 1744.95121 79800.93 1.0164 0.00059219 -0.27446 -0.00015992 0.7419 0.00043227 582.657422705184 585.328927586855 120.26 0.76074 120.26 119.96 120.72 7.6294E-06 355 55 8 0 0 0 5.969E-07 2 79283 76.85 76.85 1 0.92507 1.0305 0 51570000 26248000 25322000 19559 773 7385 7555 30611;30612 30612 LAGLEYVLHFTALNGK 16 1 0 Unmodified _LAGLEYVLHFTALNGK_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.9573 2 873.482879 1744.95121 68099.73 0.94755 0.00082767 -0.32793 -0.00028644 0.61962 0.00054123 873.482736100052 877.48949580187 120.28 0.62864 120.28 119.9 120.53 -7.6294E-06 177 45 5 0 0 0 0.024348 1 79329 41.48 41.48 1 1.0609 1.059 0 14542000 7600800 6941100 19560 773 7385 7555 30613 30613 LAGLEYVLHFTALNGK 16 1 0 Unmodified _LAGLEYVLHFTALNGK_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.3304 3 582.657678 1744.95121 79147.48 1.0976 0.0006395 -0.063712 -3.7122E-05 1.0338 0.00060238 582.65747854697 585.329025454973 132.56 0.60028 132.56 132.36 132.96 0 157 26 10 0 0 0 5.1695E-05 2 80584 49.049 49.049 1 1.0348 0.80533 0 12416000 6068500 6348000 19561 773 7385 7555 30614;30615 30614 LAGLEYVLHFTALNGK 16 1 0 Unmodified _LAGLEYVLHFTALNGK_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 873.4844 2 873.482879 1744.95121 65826.12 1.0486 0.00091594 0.27403 0.00023936 1.3226 0.0011553 873.483343136967 877.490147570564 132.56 0.34047 132.56 132.45 132.79 0 61 14 6 0 0 0 0.00021336 2 80628 62.924 62.924 1 1.2939 1.0169 0 3969500 2144800 1824700 19562 773 7385 7555 30616;30617 30617 LAGLEYVLHFTALNGK 16 1 0 Unmodified _LAGLEYVLHFTALNGK_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.33 3 582.657678 1744.95121 79666.05 1.06 0.00061764 0.062287 3.6292E-05 1.1223 0.00065393 582.657598070605 585.32907039113 132.32 0.55301 132.32 132.01 132.56 0 112 24 8 0 0 0 0.059501 1 79421 16.357 16.357 1 1.1585 0.9511 0 9240100 4506200 4733900 19563 773 7385 7555 30618 30618 LAGSLLTQALESHAEGFR 18 0 1 Unmodified _LAGSLLTQALESHAEGFR_ 0 0 0 Q58F09;Q13724;A8K9K4;C9J8D4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.3487 3 634.002285 1898.98503 78654.08 0.71987 0.0004564 -0.64165 -0.00040681 0.078228 4.9597E-05 634.001752257728 637.672885214046 107.05 0.52524 107.05 106.77 107.29 7.6294E-06 162 39 6 0 0 0 0.042521 1 66474 25.544 25.544 1 0.99064 1.0002 0 9570700 4573200 4997500 19564 1720 7386 7556 30619 30619 LAGSLLTQALESHAEGFR 18 0 1 Unmodified _LAGSLLTQALESHAEGFR_ 0 0 0 Q58F09;Q13724;A8K9K4;C9J8D4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.349 3 634.002285 1898.98503 77062.55 0.74157 0.00047016 -1.2694 -0.00080481 -0.52783 -0.00033465 634.001860542283 637.337287635628 106.12 0.63269 106.12 105.82 106.45 -7.6294E-06 145 47 5 0 0 0 0.00039945 1 67491 58.024 58.024 1 1.1613 1.1486 0 15285000 5513900 9770700 19565 1720 7386 7556 30620 30620 LAGSLLTQALESHAEGFR 18 0 1 Unmodified _LAGSLLTQALESHAEGFR_ 0 0 0 Q58F09;Q13724;A8K9K4;C9J8D4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.0027 3 634.002285 1898.98503 77359.16 0.7834 0.00049668 -0.28372 -0.00017988 0.49969 0.0003168 634.002197586777 637.338449200544 118.11 0.41937 118.11 117.96 118.38 7.6294E-06 90 16 8 0 0 0 6.9935E-07 2 69736 85.808 80.098 1 0.92971 0.79407 0 5744200 2950900 2793300 19566 1720 7386 7556 30621;30622 30622 LAGSLLTQALESHAEGFR 18 0 1 Unmodified _LAGSLLTQALESHAEGFR_ 0 0 0 Q58F09;Q13724;A8K9K4;C9J8D4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.3402 3 634.002285 1898.98503 76524.38 0.52805 0.00033478 -0.43655 -0.00027677 0.0915 5.8011E-05 634.002083227827 637.338471659157 117.85 0.36171 117.85 117.71 118.07 7.6294E-06 77 16 8 0 0 0 2.8103E-06 2 68568 80.638 80.638 1 0.76038 0.62848 0 8096400 4630000 3466400 19567 1720 7386 7556 30623;30624 30624 LAGVTLGQR 9 0 1 Unmodified _LAGVTLGQR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 462.7783 2 457.774534 913.534515 90252.2 0.31208 0.00014286 -0.29034 -0.00013291 0.021743 9.9536E-06 457.774368381395 462.778434026582 55.44 0.59158 55.44 55.161 55.753 -3.8147E-06 157 38 6 0 0 0 0.019545 1 27763 51.066 19.837 1 0.95027 0.7945 0 3626700 1818800 1807900 19568 222 7387 7557 30625 30625 LAGVTLGQR 9 0 1 Unmodified _LAGVTLGQR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 462.7785 2 457.774534 913.534515 89461.54 0.011592 5.3065E-06 -0.0023208 -1.0624E-06 0.0092712 4.2441E-06 457.774487397596 462.778585998431 55.761 0.63774 55.761 55.458 56.095 -3.8147E-06 156 39 6 0 0 0 0.046218 1 27406 39.547 15.778 1 0.87534 0.7446 0 2958200 1422300 1535900 19569 222 7387 7557 30626 30626 LAHEVGWK 8 1 0 Unmodified _LAHEVGWK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3 Q53H34 Q53H34 RPL13A;RPL13a 60S ribosomal protein L13a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 313.8402 3 313.839743 938.497401 105155.4 0.16871 5.2948E-05 -0.17706 -5.5569E-05 -0.0083496 -2.6204E-06 313.839660960395 316.510976025778 27.36 0.62073 27.36 27.141 27.762 -1.9073E-06 171 37 8 0 0 0 0.010872 2 12520 49.097 29.393 1 0.72101 0.83482 0 233620000 138130000 95487000 19570 1558 7388 7558 30627;30628 30628 LAHEVGWK 8 1 0 Unmodified _LAHEVGWK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3 Q53H34 Q53H34 RPL13A;RPL13a 60S ribosomal protein L13a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.256 2 470.255977 938.497401 89464.39 0.34436 0.00016194 0.34632 0.00016286 0.69068 0.0003248 470.255667724751 474.26284097175 27.345 0.69635 27.345 27.083 27.779 -1.9073E-06 188 41 9 0 0 0 0.0037462 2 12674 96.492 70.364 1 0.60506 0.68541 0 154620000 88086000 66533000 19571 1558 7388 7558 30629;30630 30630 LAHEVGWK 8 1 0 Unmodified _LAHEVGWK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3 Q53H34 Q53H34 RPL13A;RPL13a 60S ribosomal protein L13a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 313.8398 3 313.839743 938.497401 106141.4 0.29682 9.3153E-05 -0.14914 -4.6806E-05 0.14768 4.6346E-05 313.839711489908 316.510993535964 26.524 0.57247 26.524 26.374 26.946 0 157 29 9 0 0 0 0.0090023 2 11883 52.716 23.818 1 0.74401 0.87241 0 326790000 185360000 141430000 19572 1558 7388 7558 30631;30632 30632 LAHEVGWK 8 1 0 Unmodified _LAHEVGWK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3 Q53H34 Q53H34 RPL13A;RPL13a 60S ribosomal protein L13a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.2627 2 470.255977 938.497401 88043.66 0.27488 0.00012927 -0.053384 -2.5104E-05 0.2215 0.00010416 470.255829999241 474.263009348738 26.549 0.53077 26.549 26.374 26.905 0 108 27 7 0 0 0 0.0011205 2 11904 122.13 80.476 1 0.81814 0.95971 0 332460000 171790000 160680000 19573 1558 7388 7558 30633;30634 30633 LAHEVGWK 8 1 0 Unmodified _LAHEVGWK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3 Q53H34 Q53H34 RPL13A;RPL13a 60S ribosomal protein L13a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.256 2 470.255977 938.497401 89802.77 0.10425 4.9026E-05 0.095863 4.508E-05 0.20012 9.4106E-05 470.255772850879 474.263036957995 30.58 0.90884 30.58 30.213 31.122 0 236 56 7 0 0 0 0.013825 1 12691 72.789 55.496 1 0.88558 0.68834 0 12576000 6353500 6222900 19574 1558 7388 7558 30635 30635 LAHEVGWK 8 1 0 Unmodified _LAHEVGWK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3 Q53H34 Q53H34 RPL13A;RPL13a 60S ribosomal protein L13a ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 474.2631 2 470.255977 938.497401 NaN NaN NaN 0.12953 6.091E-05 NaN NaN NaN NaN 30.391 0.60152 30.391 30.154 30.756 0 0 0 0 0.014375 1 12072 70.525 49.225 1 NaN NaN 0 6014900 0 6014900 19575 1558 7388 7558 30636 30636 LAHISTDPR 9 0 1 Unmodified _LAHISTDPR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 337.186 3 337.185691 1008.53524 102994 -0.015806 -5.3297E-06 -0.046662 -1.5734E-05 -0.062468 -2.1063E-05 337.185606004903 340.521726790019 23.856 0.4159 23.856 23.622 24.038 0 82 20 6 0 0 0 0.010456 1 9691 38.086 4.8238 1 1.2121 1.2441 0 25717000 10758000 14959000 19576 122 7389 7559 30637 30637 LAHLGVQVK 9 1 0 Unmodified _LAHLGVQVK_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 322.2032 3 322.202793 963.58655 106853.8 0.2087 6.7245E-05 0.3351 0.00010797 0.5438 0.00017522 322.202884428639 324.874211584953 35.954 0.454 35.954 35.777 36.231 0 114 37 4 0 0 0 0.01372 1 18383 30.687 15.045 1 1.2127 1.2538 0 18510000 6440300 12069000 19577 1444 7390 7560 30638 30638 LAHLGVQVK 9 1 0 Unmodified _LAHLGVQVK_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.8007 2 482.800552 963.58655 90458.52 0.28463 0.00013742 -0.048702 -2.3513E-05 0.23593 0.00011391 482.800581079998 486.80769983242 35.954 0.42695 35.954 35.791 36.218 0 90 35 4 0 0 0 0.034797 1 18451 44.117 30.193 1 1.1725 1.188 0 12958000 6801500 6156100 19578 1444 7390 7560 30639 30639 LAIALGDAVNHPTPMAAAANEVYK 24 1 0 Oxidation (M) _LAIALGDAVNHPTPM(ox)AAAANEVYK_ LAIALGDAVNHPTPM(1)AAAANEVYK LAIALGDAVNHPTPM(42.7)AAAANEVYK 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.7562 3 818.421291 2452.24204 68220.37 0.60017 0.00049119 -0.25714 -0.00021045 0.34303 0.00028074 818.755546869237 821.426766562746 89.939 0.4756 89.939 89.638 90.114 0 152 37 7 0 0 0 4.3248E-06 1 54196 42.705 42.705 1 2.0002 2.1617 0 35356000 12890000 22465000 19579 1194;1193 7391 7561 30640 30640 911 LAIALGDAVNHPTPMAAAANEVYK 24 1 0 Oxidation (M) _LAIALGDAVNHPTPM(ox)AAAANEVYK_ LAIALGDAVNHPTPM(1)AAAANEVYK LAIALGDAVNHPTPM(89.46)AAAANEVYK 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.0927 3 818.421291 2452.24204 68300.05 0.91844 0.00075167 -0.36467 -0.00029845 0.55377 0.00045322 818.755813237787 821.426838747104 90.307 0.5431 90.307 90.038 90.582 0 225 44 7 0 0 0 3.9306E-16 2 54572 89.462 89.462 1 1.865 2.02 0 43730000 17892000 25838000 19580 1194;1193 7391 7561 30641;30642 30641 911 LAIALGDAVNHPTPMAAAANEVYK 24 1 0 Oxidation (M) _LAIALGDAVNHPTPM(ox)AAAANEVYK_ LAIALGDAVNHPTPM(1)AAAANEVYK LAIALGDAVNHPTPM(59.54)AAAANEVYK 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.7566 3 818.421291 2452.24204 67833.39 0.89861 0.00073544 -0.49533 -0.00040539 0.40328 0.00033006 818.755339850014 821.760754187129 88.959 0.47337 88.959 88.722 89.195 0 255 39 9 0 0 0 7.9046E-10 3 54998 59.539 59.539 1 1.7982 2.0221 0 56353000 24610000 31743000 19581 1194;1193 7391 7561 30643;30644;30645 30645 911 LAIALGDAVNHPTPMAAAANEVYK 24 1 0 Oxidation (M) _LAIALGDAVNHPTPM(ox)AAAANEVYK_ LAIALGDAVNHPTPM(1)AAAANEVYK LAIALGDAVNHPTPM(57.48)AAAANEVYK 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.426 3 818.421291 2452.24204 67709.61 0.60387 0.00049422 -0.27439 -0.00022457 0.32948 0.00026966 818.421351305723 821.761142337141 89.321 0.57187 89.321 89.055 89.627 0 244 44 8 0 0 0 1.4027E-09 1 55307 57.484 57.484 1 1.6469 1.8415 0 86517000 34171000 52346000 19582 1194;1193 7391 7561 30646 30646 911 LAIALGDAVNHPTPMAAAANEVYK 24 1 0 Oxidation (M) _LAIALGDAVNHPTPM(ox)AAAANEVYK_ LAIALGDAVNHPTPM(1)AAAANEVYK LAIALGDAVNHPTPM(40.38)AAAANEVYK 0 1 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 821.428 3 818.421291 2452.24204 67142.02 0.52714 0.00043143 -0.12617 -0.00010326 0.40097 0.00032816 818.755668266897 821.427062336824 102.88 0.44849 102.88 102.68 103.13 -7.6294E-06 186 28 9 0 0 0 5.7927E-06 1 57526 40.381 40.381 1 1.3272 1.0805 0 7287100 2967000 4320200 19583 1194;1193 7391 7561 30647 30647 911 LAIALGDAVNHPTPMAAAANEVYK 24 1 0 Unmodified _LAIALGDAVNHPTPMAAAANEVYK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 816.096 3 813.089653 2436.24713 NaN NaN NaN 0.22844 0.00018574 NaN NaN NaN NaN 114.13 0.42487 114.13 113.95 114.38 0 0 0 0 1.1731E-12 1 65646 70.99 30.471 1 NaN NaN 0 7544100 0 7544100 19584 1194;1193 7391 7562 30648 30648 LAIGVEGGFDLSEEK 15 1 0 Unmodified _LAIGVEGGFDLSEEK_ 0 0 0 A0A140VJZ1;P45974;F5H571 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.4067 2 782.398678 1562.7828 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.01 1 103.01 102.51 103.51 0 0 0 0 0.0013917 1 63485 72.34 44.598 1 19585 613 7392 7563 30649 30649 LAIGVEGGFDLSEEK 15 1 0 Unmodified _LAIGVEGGFDLSEEK_ 0 0 0 A0A140VJZ1;P45974;F5H571 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.4061 2 782.398678 1562.7828 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.37 1 102.37 101.87 102.87 -7.6294E-06 0 0 0 0.0012687 1 64604 59.198 38.995 1 19586 613 7392 7563 30650 30650 LAILQVGNR 9 0 1 Unmodified _LAILQVGNR_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.3065 2 492.303458 982.592364 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.295 1 74.295 73.795 74.795 0 0 0 0 0.0065179 1 43592 67.032 20.606 1 19587 196 7393 7564 30651 30651 LAINLSSGVSGAGGTVHQPGFIVVETNYR 29 0 1 Unmodified _LAINLSSGVSGAGGTVHQPGFIVVETNYR_ 0 0 0 B4DNU0;Q53HH3;Q92759 B4DNU0 B4DNU0 GTF2H4 General transcription factor IIH subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 985.5203 3 981.84895 2942.52502 60514.5 0.45386 0.00044562 -0.096577 -9.4824E-05 0.35728 0.0003508 982.183161896828 985.519096003438 121.77 0.19451 121.77 121.64 121.83 7.6294E-06 18 9 4 0 0 0 0.02343 1 71613 16.202 16.202 1 1.0644 0.90511 0 2963700 1834700 1129100 19588 1016 7394 7565 30652 30652 LAIQLGAQALLGAAK 15 1 0 Unmodified _LAIQLGAQALLGAAK_ 0 0 0 B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36;J3KR12;B4DQK8 B3KMB7 B3KMB7 PYCR2;P5CR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.4434 2 719.443026 1436.8715 74002.71 0.90202 0.00064895 -0.27516 -0.00019796 0.62686 0.00045099 719.442939078461 723.449538371771 115.51 0.39052 115.51 115.33 115.72 0 99 24 6 0 0 0 0.00022309 1 75450 68.525 68.525 1 0.79052 0.79642 0 7315200 4353800 2961400 19589 137 7395 7566 30653 30653 LAIQLLK 7 1 0 Unmodified _LAIQLLK_ 0 0 0 Q5SRE5;Q9BS12 Q5SRE5 Q5SRE5 NUP188 Nucleoporin NUP188 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 403.7831 2 399.776014 797.537475 97558.8 0.12049 4.8167E-05 0.42143 0.00016848 0.54191 0.00021664 399.776204059165 403.783311324665 87.08 0.12642 87.08 87.004 87.13 7.6294E-06 19 8 4 0 0 0 0.022924 1 52566 91.584 0 1 1.3858 1.4336 0 12721000 4800200 7921000 19590 1816 7396 7567 30654 30654 LAIQLLK 7 1 0 Unmodified _LAIQLLK_ 0 0 0 Q5SRE5;Q9BS12 Q5SRE5 Q5SRE5 NUP188 Nucleoporin NUP188 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 403.7826 2 399.776014 797.537475 94049.2 0.39982 0.00015984 0.66074 0.00026415 1.0606 0.00042398 399.776294526093 403.783208890469 85.956 0.095474 85.956 85.892 85.988 0 21 6 4 0 0 0 0.013378 2 52968 102.98 0 1 1.8478 1.8516 0 13874000 4075200 9799000 19591 1816 7396 7567 30655;30656 30655 LAIWDTAGQER 11 0 1 Unmodified _LAIWDTAGQER_ 0 0 0 Q9NP72;B7Z4P9 Q9NP72 Q9NP72 RAB18 Ras-related protein Rab-18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3282 2 630.322576 1258.6306 79427.09 0.55945 0.00035264 0.15858 9.9958E-05 0.71804 0.00045259 630.322342665753 635.32660951948 75.963 0.22905 75.963 75.818 76.047 0 40 19 5 0 0 0 0.001099 1 44727 70.1 22.902 1 2.932 2.9501 0 9331300 2968100 6363200 19592 2055 7397 7568 30657 30657 LAIWDTAGQER 11 0 1 Unmodified _LAIWDTAGQER_ 0 0 0 Q9NP72;B7Z4P9 Q9NP72 Q9NP72 RAB18 Ras-related protein Rab-18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3253 2 630.322576 1258.6306 78686.7 0.43071 0.00027148 -0.71395 -0.00045002 -0.28325 -0.00017854 630.321653783428 635.325896468393 74.807 0.1964 74.807 74.702 74.898 0 43 17 4 0 0 0 0.0036568 1 45010 59.426 23.092 1 2.7672 2.7296 0 12938000 3005000 9932900 19593 2055 7397 7568 30658 30658 LALAGIGQPVK 11 1 0 Unmodified _LALAGIGQPVK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.8418 2 533.834591 1065.65463 82766.64 0.32411 0.00017302 -0.027571 -1.4718E-05 0.29654 0.00015831 533.834524330581 537.841611738252 78.482 0.68874 78.482 78.146 78.835 0 301 58 7 0 0 0 0.00012034 2 47504 96.253 57.461 1 0.67898 0.76372 0 119980000 71857000 48125000 19594 1837 7398 7569 30659;30660 30660 LALAGIGQPVK 11 1 0 Unmodified _LALAGIGQPVK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.8351 2 533.834591 1065.65463 NaN NaN NaN -0.049355 -2.6347E-05 NaN NaN NaN NaN 90.985 0.71241 90.985 90.662 91.374 -7.6294E-06 0 0 0 0.0014508 1 50361 83.206 48.398 1 NaN NaN 0 9432800 9432800 0 19595 1837 7398 7569 30661 30661 LALAGIGQPVK 11 1 0 Unmodified _LALAGIGQPVK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.8348 2 533.834591 1065.65463 NaN NaN NaN -0.18641 -9.951E-05 NaN NaN NaN NaN 90.833 0.70762 90.833 90.533 91.241 7.6294E-06 0 0 0 0.0051612 1 49432 65.246 30.439 1 NaN NaN 0 7055800 7055800 0 19596 1837 7398 7569 30662 30662 LALDLEIATYR 11 0 1 Unmodified _LALDLEIATYR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.3631 2 639.358628 1276.7027 76158.9 0.60025 0.00038377 0.30881 0.00019744 0.90905 0.00058121 639.35861736274 644.362910888264 109.59 0.64321 109.59 109.33 109.97 0 207 48 6 0 0 0 0.00016552 1 68515 94.297 0 1 1.0763 1.2016 0 85691000 45302000 40389000 + 19597 1308;1309 7399 7570 30663 30663 LALDLEIATYR 11 0 1 Unmodified _LALDLEIATYR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.3567 2 639.358628 1276.7027 NaN NaN NaN -3.2432 -0.0020736 NaN NaN NaN NaN 109.78 0.16235 109.78 109.75 109.91 0 0 0 0 0.0021492 1 68804 77.379 0 1 NaN NaN 0 8741800 0 8741800 + 19598 1308;1309 7399 7570 30664 30664 LALDLEIATYR 11 0 1 Unmodified _LALDLEIATYR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.36 2 639.358628 1276.7027 NaN NaN NaN 0.28772 0.00018395 NaN NaN NaN NaN 110.44 0.71683 110.44 110.1 110.82 0 0 0 0 5.2053E-05 2 69641 98.943 0 1 NaN NaN 0 1125400000 1125400000 0 + 19599 1308;1309 7399 7570 30665;30666 30666 LALDLEIATYR 11 0 1 Unmodified _LALDLEIATYR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.363 2 639.358628 1276.7027 76254.12 0.82853 0.00052973 0.1953 0.00012487 1.0238 0.00065459 639.358668904977 644.36275247608 109.01 0.59615 109.01 108.76 109.36 0 220 43 10 0 0 0 1.2643E-05 3 69730 107.79 0 1 1.0637 1.2173 0 162810000 77439000 85374000 + 19600 1308;1309 7399 7570 30667;30668;30669 30667 LALDLEIATYR 11 0 1 Unmodified _LALDLEIATYR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.3593 2 639.358628 1276.7027 NaN NaN NaN -0.048776 -3.1185E-05 NaN NaN NaN NaN 109.92 0.86198 109.92 109.51 110.37 0 0 0 0 3.0737E-23 2 70562 155.42 0 1 NaN NaN 0 502270000 502270000 0 + 19601 1308;1309 7399 7570 30670;30671 30670 LALDLEIATYR 11 0 1 Unmodified _LALDLEIATYR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.3631 2 639.358628 1276.7027 76429.78 0.63466 0.00040578 0.22711 0.00014521 0.86177 0.00055098 639.359150298905 644.362600040522 120.67 0.54604 120.67 120.46 121.01 0 136 25 8 0 0 0 5.8219E-05 1 71686 98.943 0 1 1.6344 1.4063 0 51266000 20027000 31239000 + 19602 1308;1309 7399 7570 30672 30672 LALDLEIATYR 11 0 1 Unmodified _LALDLEIATYR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.3591 2 639.358628 1276.7027 NaN NaN NaN 0.64943 0.00041522 NaN NaN NaN NaN 121.64 1.0259 121.64 121.31 122.33 7.6294E-06 0 0 0 0.00050231 1 72285 90.108 0 1 NaN NaN 0 52310000 52310000 0 + 19603 1308;1309 7399 7570 30673 30673 LALDLEIATYR 11 0 1 Unmodified _LALDLEIATYR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.3634 2 639.358628 1276.7027 76478.7 0.8246 0.00052721 0.016305 1.0424E-05 0.8409 0.00053764 639.359011612889 644.362472325148 120.46 0.63229 120.46 120.22 120.85 7.6294E-06 154 33 7 0 0 0 0.00019325 1 70565 93.096 0 1 1.3519 1.1793 0 35677000 13952000 21725000 + 19604 1308;1309 7399 7570 30674 30674 LALDLEIATYR 11 0 1 Unmodified _LALDLEIATYR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.3591 2 639.358628 1276.7027 NaN NaN NaN 0.62557 0.00039997 NaN NaN NaN NaN 121.44 0.96231 121.44 121.11 122.07 0 0 0 0 0.0024126 1 71236 74.841 0 1 NaN NaN 0 106340000 106340000 0 + 19605 1308;1309 7399 7570 30675 30675 LALDMEIHAYR 11 0 1 Oxidation (M) _LALDM(ox)EIHAYR_ LALDM(1)EIHAYR LALDM(88.44)EIHAYR 0 1 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.2316 3 449.8957 1346.66527 88029.75 0.11132 5.0084E-05 0.040267 1.8116E-05 0.15159 6.82E-05 449.895724501652 453.231821440738 65.552 1.304 65.552 64.73 66.034 0 692 116 8 0 0 0 7.619E-05 2 37519 88.441 72.902 1 1.5213 1.7315 0 114670000 49051000 65617000 19606 1440 7400 7571 30676;30677 30677 1137 LALDMEIHAYR 11 0 1 Oxidation (M) _LALDM(ox)EIHAYR_ LALDM(1)EIHAYR LALDM(76.66)EIHAYR 0 1 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.2318 3 449.8957 1346.66527 86642.23 0.065201 2.9334E-05 0.14905 6.7059E-05 0.21426 9.6393E-05 449.895736196266 453.231872710697 63.846 1.1089 63.846 63.235 64.344 0 572 98 8 0 0 0 0.0001169 3 37372 76.655 76.655 1 1.4832 1.6864 0 120420000 50111000 70311000 19607 1440 7400 7571 30678;30679;30680 30679 1137 LALDMEISAYR 11 0 1 Oxidation (M) _LALDM(ox)EISAYR_ LALDM(1)EISAYR LALDM(112.71)EISAYR 0 1 0 P20700;E9PBF6;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.3315 2 649.32647 1296.63839 74329.05 1.0853 0.00070473 0.50026 0.00032483 1.5856 0.0010296 649.327463016104 654.330521068486 82.858 0.45666 82.858 82.666 83.123 0 174 37 6 0 0 0 3.8563E-08 2 49504 112.71 86.366 1 1.77 1.9603 0 62934000 24665000 38269000 19608 1502 7401 7572 30681;30682 30681 1258 LALDMEISAYR 11 0 1 Oxidation (M) _LALDM(ox)EISAYR_ LALDM(1)EISAYR LALDM(85.35)EISAYR 0 1 0 P20700;E9PBF6;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.3299 2 649.32647 1296.63839 74114.61 0.85451 0.00055486 0.7683 0.00049888 1.6228 0.0010537 649.327518619382 654.330789184735 81.916 0.49992 81.916 81.665 82.165 0 202 43 6 0 0 0 0.00016984 2 49978 85.355 71.44 1 1.5719 1.8284 0 60137000 25210000 34927000 19609 1502 7401 7572 30683;30684 30683 1258 LALDVEIATYR 11 0 1 Unmodified _LALDVEIATYR_ 0 0 0 CON__P35908;P35908;Q01546;CON__Q01546;CON__P07744;H0YID6;CON__REFSEQ:XP_932229;CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;B4DL32;H0YI76 CON__P35908;CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647 CON__P35908 KRT2;KRT76;KRT79;KRT75;KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.351 2 632.350803 1262.68705 NaN NaN NaN -0.34312 -0.00021698 NaN NaN NaN NaN 101.57 1.0952 101.57 101.12 102.22 0 0 0 0 7.803E-05 1 63707 95.573 41.034 1 NaN NaN 0 1040200000 1040200000 0 + 19610 1166;1162;859;1154;1147;1180;1175 7402 7573 30685 30685 LALDVEIATYR 11 0 1 Unmodified _LALDVEIATYR_ 0 0 0 CON__P35908;P35908;Q01546;CON__Q01546;CON__P07744;H0YID6;CON__REFSEQ:XP_932229;CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;B4DL32;H0YI76 CON__P35908;CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647 CON__P35908 KRT2;KRT76;KRT79;KRT75;KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.3513 2 632.350803 1262.68705 NaN NaN NaN -0.078808 -4.9834E-05 NaN NaN NaN NaN 114.17 0.78451 114.17 113.93 114.71 0 0 0 0 0.0022687 1 65767 76.228 36.923 1 NaN NaN 0 15640000 15640000 0 + 19611 1166;1162;859;1154;1147;1180;1175 7402 7573 30686 30686 LALDYGIK 8 1 0 Unmodified _LALDYGIK_ 0 0 0 A0A024R7I3;P61006 A0A024R7I3 A0A024R7I3 RAB8A Ras-related protein Rab-8A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.7679 2 446.760561 891.506569 95820.09 0.27557 0.00012311 0.53453 0.00023881 0.8101 0.00036192 446.760442879042 450.767977297332 75.073 0.47826 75.073 74.763 75.241 0 100 38 4 0 0 0 0.036793 1 44091 48.561 0 1 2.2084 2.2277 0 7067500 2470300 4597300 19612 226 7403 7574 30687 30687 LALFPLLPK 9 1 0 Unmodified _LALFPLLPK_ 0 0 0 A0A024RBU4;O96006 A0A024RBU4 A0A024RBU4 hCG_1981838;ZBED1 Zinc finger BED domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.3336 2 506.333696 1010.65284 87888.65 0.53956 0.0002732 0.42534 0.00021536 0.9649 0.00048856 506.333496779816 510.341589706452 124.08 1.6117 124.08 123.05 124.66 0 278 116 7 0 0 0 0.0019598 3 80451 78.616 78.616 1 0.76571 0.78175 0 13179000 7573700 5605800 19613 347 7404 7575 30688;30689;30690 30688 LALFPLLPK 9 1 0 Unmodified _LALFPLLPK_ 0 0 0 A0A024RBU4;O96006 A0A024RBU4 A0A024RBU4 hCG_1981838;ZBED1 Zinc finger BED domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.3339 2 506.333696 1010.65284 88001.55 0.50291 0.00025464 0.35542 0.00017996 0.85833 0.0004346 506.333580059077 510.341306676767 123.55 0.84711 123.55 123.04 123.89 7.6294E-06 198 61 6 0 0 0 0.0037865 2 81967 70.912 70.912 1 0.76332 0.77816 0 12179000 6788700 5390300 19614 347 7404 7575 30691;30692 30692 LALFQAIGK 9 1 0 Unmodified _LALFQAIGK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.8056 2 480.797478 959.580402 NaN NaN NaN 0.11808 5.6771E-05 NaN NaN NaN NaN 96.125 0.70446 96.125 95.901 96.606 -7.6294E-06 0 0 0 0.0020713 2 59861 82.671 39.477 1 NaN NaN 0 12864000 0 12864000 19615 397;1622 7405 7576 30693;30694 30694 LALGIPLPELR 11 0 1 Unmodified _LALGIPLPELR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.8786 2 596.376623 1190.73869 79471.8 0.87835 0.00052383 -0.067367 -4.0176E-05 0.81099 0.00048365 596.376450600683 601.380687965561 123.94 0.49899 123.94 123.74 124.24 0 170 34 7 0 0 0 0.00037059 2 80353 83.783 78.581 1 0.85968 0.89643 0 21469000 10940000 10529000 19616 1259 7406 7577 30695;30696 30696 LALGIPLPELR 11 0 1 Unmodified _LALGIPLPELR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.8786 2 596.376623 1190.73869 78970.82 0.79551 0.00047442 0.14208 8.4731E-05 0.93758 0.00055915 596.376550539221 601.38075592874 123.53 0.55285 123.53 123.28 123.83 0 194 39 7 0 0 0 0.0043198 2 81913 58.23 55.511 1 0.83445 0.88065 0 23414000 12731000 10683000 19617 1259 7406 7577 30697;30698 30698 LALGQINIAK 10 1 0 Unmodified _LALGQINIAK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.8343 2 520.826766 1039.63898 84859.87 0.3777 0.00019672 -0.029663 -1.5449E-05 0.34804 0.00018127 520.82691167329 524.833805500783 86.002 0.82552 86.002 85.79 86.616 -7.6294E-06 420 66 10 0 0 0 1.1026E-08 2 51655 123.69 104.91 1 1.2358 1.4658 0 496600000 219450000 277150000 19618 1183 7407 7578 30699;30700 30699 LALGQINIAK 10 1 0 Unmodified _LALGQINIAK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.8269 2 520.826766 1039.63898 85243.33 0.78021 0.00040636 -0.35981 -0.0001874 0.4204 0.00021896 520.826692341952 524.833636749779 84.936 0.86914 84.936 84.751 85.62 0 434 73 10 0 0 0 9.8899E-12 2 52164 138.83 111 1 1.1584 1.3642 0 487960000 211420000 276550000 19619 1183 7407 7578 30701;30702 30702 LALGQINIAK 10 1 0 Unmodified _LALGQINIAK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.8271 2 520.826766 1039.63898 83919.52 0.34371 0.00017901 -0.30174 -0.00015716 0.041967 2.1858E-05 520.826726366906 524.833644213027 98.627 1.0968 98.627 98.419 99.516 0 307 65 10 0 0 0 3.285E-08 2 55586 119.29 86.936 1 1.6788 1.4501 0 107380000 39538000 67845000 19620 1183 7407 7578 30703;30704 30704 LALGQINIAK 10 1 0 Unmodified _LALGQINIAK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.8273 2 520.826766 1039.63898 83586.8 0.43961 0.00022896 -0.19986 -0.00010409 0.23974 0.00012486 520.826759507893 524.833671956289 98.487 0.94954 98.487 98.209 99.158 0 280 56 9 0 0 0 9.973E-06 2 54622 105.25 79.077 1 1.6713 1.4274 0 103560000 42600000 60964000 19621 1183 7407 7578 30705;30706 30706 LALHELK 7 1 0 Unmodified _LALHELK_ 0 0 0 Q7Z4Y4;Q9UIJ7;B3KWD9;Q7Z531 Q7Z4Y4 Q7Z4Y4 AK3 GTP:AMP phosphotransferase AK3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 412.255 2 412.255446 822.496338 94015.84 -0.54408 -0.0002243 -0.18328 -7.5559E-05 -0.72736 -0.00029986 412.255413406992 416.262647259625 41.546 0.49705 41.546 41.331 41.828 0 132 35 6 0 0 0 0.062615 1 18736 49.358 0 1 1.801 1.4283 0 3996900 1465600 2531300 19622 1878 7408 7579 30707 30707 LALIAPK 7 1 0 Unmodified _LALIAPK_ 0 0 0 B4DLS8;Q53GV6;B2R791;O43395;B4DM28 B4DLS8 B4DLS8 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 363.2495 2 363.249632 724.484711 100417.1 -0.24585 -8.9306E-05 -0.031602 -1.1479E-05 -0.27746 -0.00010079 363.249513378523 367.256724093696 60.639 0.21385 60.639 60.526 60.739 0 54 15 4 0 0 0 0.026837 1 35539 80.377 32.135 1 1.2702 1.2989 0 17386000 7742600 9643300 19623 848 7409 7580 30708 30708 LALIGGLEGFLSK 13 1 0 Unmodified _LALIGGLEGFLSK_ 0 0 0 Q3SYP6;Q3ZB84;A4D273;G3V325;B4DJ38;O75127 Q3SYP6 Q3SYP6 PTCD1;ATP5J2-PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.3921 2 659.39247 1316.77039 77805.37 0.96522 0.00063646 -0.55027 -0.00036285 0.41494 0.00027361 659.392275447643 663.90026555508 127.51 0.43465 127.51 127.26 127.69 0 85 28 4 0 0 0 0.0033389 1 83044 63.624 53.392 1 1.5693 1.6656 0 3720800 1485200 2235600 19624 669 7410 7581 30709 30709 LALIGGLEGFLSK 13 1 0 Unmodified _LALIGGLEGFLSK_ 0 0 0 Q3SYP6;Q3ZB84;A4D273;G3V325;B4DJ38;O75127 Q3SYP6 Q3SYP6 PTCD1;ATP5J2-PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.3933 2 659.39247 1316.77039 79600.59 0.90905 0.00059942 -0.75089 -0.00049513 0.15816 0.00010429 659.392142012852 663.399328545871 127.07 0.49897 127.07 126.82 127.32 0 99 31 5 0 0 0 0.0056925 1 84774 59.198 49.543 1 1.5075 1.552 0 4879000 2098400 2780500 19625 669 7410 7581 30710 30710 LALLEPVFPIACHR 14 0 1 Unmodified _LALLEPVFPIACHR_ 0 0 0 Q99549;H0Y6J1 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.9733 3 545.972832 1634.89667 83213.17 0.62529 0.00034139 -0.066895 -3.6523E-05 0.55839 0.00030487 545.972766862315 549.309007643607 115.24 0.60074 115.24 114.99 115.59 0 117 38 5 0 0 0 0.00026539 2 73322 57.802 57.802 1 0.85038 0.85121 0 8977600 5050000 3927500 19626 1994 7411 7582 30711;30712 30712 LALLEPVFPIACHR 14 0 1 Unmodified _LALLEPVFPIACHR_ 0 0 0 Q99549;H0Y6J1 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.3091 3 545.972832 1634.89667 83551.92 0.63079 0.0003444 -0.46815 -0.0002556 0.16265 8.8801E-05 545.972494572361 549.308890007082 114.53 0.5891 114.53 114.25 114.84 0 143 37 6 0 0 0 4.5412E-05 2 74456 77.185 62.753 1 0.90233 0.89659 0 7419400 4411200 3008200 19627 1994 7411 7582 30713;30714 30714 LALLEPVFPIACHR 14 0 1 Unmodified _LALLEPVFPIACHR_ 0 0 0 Q99549;H0Y6J1 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.3087 3 545.972832 1634.89667 82396.07 0.9004 0.0004916 -0.53876 -0.00029415 0.36165 0.00019745 545.972607018076 549.308812689536 125.93 0.52454 125.93 125.71 126.24 0 126 23 8 0 0 0 0.00012283 2 75648 61.11 61.11 1 1.7476 1.4653 0 4102600 1563700 2538900 19628 1994 7411 7582 30715;30716 30715 LALLEPVFPIACHR 14 0 1 Unmodified _LALLEPVFPIACHR_ 0 0 0 Q99549;H0Y6J1 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.3085 3 545.972832 1634.89667 82367.2 0.67702 0.00036963 -0.17104 -9.3381E-05 0.50598 0.00027625 545.972852088993 549.30881639531 125.69 0.45452 125.69 125.47 125.92 0 112 21 8 0 0 0 0.011951 2 74511 28.632 28.632 1 1.6334 1.4196 0 3485700 1128700 2356900 19629 1994 7411 7582 30717;30718 30717 LALLHEGTGPR 11 0 1 Unmodified _LALLHEGTGPR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 391.8918 3 388.555895 1162.64586 96853.27 0.64769 0.00025166 -0.14625 -5.6826E-05 0.50143 0.00019484 388.555745604589 391.891849649591 43.312 0.42552 43.312 43.128 43.553 0 163 35 7 0 0 0 0.0015855 2 23454 46.844 37.968 1 0.96839 1.1243 0 58929000 28436000 30493000 19630 803 7412 7583 30719;30720 30720 LALLLSQFVGSQSVR 15 0 1 Unmodified _LALLLSQFVGSQSVR_ 0 0 0 P52948;H7C3P6 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.7106 2 809.469772 1616.92499 69522.7 0.91316 0.00073917 0.93499 0.00075685 1.8481 0.001496 809.971064374721 814.47552633427 121.22 0.45089 121.22 121.06 121.51 0 116 28 6 0 0 0 9.2764E-07 1 78239 88.441 88.441 1 1.173 1.2324 0 11657000 4915800 6740700 19631 1603 7413 7584 30721 30721 LALLLSQFVGSQSVR 15 0 1 Unmodified _LALLLSQFVGSQSVR_ 0 0 0 P52948;H7C3P6 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.4709 2 809.469772 1616.92499 67994.97 0.93189 0.00075434 0.57455 0.00046508 1.5064 0.0012194 809.470290342055 814.474131508826 120.73 0.51206 120.73 120.52 121.03 7.6294E-06 131 34 6 0 0 0 5.2631E-07 2 79803 101.93 101.93 1 1.4451 1.4239 0 13114000 6206500 6907500 19632 1603 7413 7584 30722;30723 30723 LALLLSQFVGSQSVR 15 0 1 Unmodified _LALLLSQFVGSQSVR_ 0 0 0 P52948;H7C3P6 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.9729 2 809.469772 1616.92499 69385.83 0.77591 0.00062807 0.77612 0.00062825 1.552 0.0012563 809.470545500088 814.474576713474 133.76 0.43219 133.76 133.59 134.02 0 76 16 7 0 0 0 0.00021915 2 81530 66.262 66.262 1 1.7055 1.447 0 2904500 1307900 1596500 19633 1603 7413 7584 30724;30725 30725 LALLLSQFVGSQSVR 15 0 1 Unmodified _LALLLSQFVGSQSVR_ 0 0 0 P52948;H7C3P6 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 814.4781 2 809.469772 1616.92499 70074.69 1.1099 0.00089839 0.26698 0.00021611 1.3768 0.0011145 809.971527318353 814.474187931539 133.47 0.4335 133.47 133.24 133.67 0 75 15 8 0 0 0 3.5939E-05 1 80376 86.313 86.313 1 1.1715 1.0332 0 2458100 1124000 1334100 19634 1603 7413 7584 30726 30726 LALLNEK 7 1 0 Unmodified _LALLNEK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 404.7539 2 400.747453 799.480354 NaN NaN NaN -1.1054 -0.00044297 NaN NaN NaN NaN 54.289 0.33519 54.289 54.169 54.505 0 0 0 0 0.039919 1 30513 63.301 18.881 1 NaN NaN 0 68399000 0 68399000 19635 186;1747;718 7414 7585 30727 30727 LALLNEK 7 1 0 Unmodified _LALLNEK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 404.7544 2 400.747453 799.480354 96952.48 -0.24336 -9.7527E-05 -0.072576 -2.9085E-05 -0.31594 -0.00012661 400.747384586612 404.754409075317 62.391 0.53552 62.391 62.269 62.805 -3.8147E-06 96 38 4 0 0 0 0.053301 1 31353 53.554 7.1838 1 1.9615 1.6151 0 10489000 3495000 6993800 19636 186;1747;718 7414 7585 30728 30728 LALLQHLR 8 0 1 Unmodified _LALLQHLR_ 0 0 0 H3BR51;Q3KRB8;Q6P4F7 H3BR51 H3BR51 ARHGAP11A;ARHGAP11B Rho GTPase-activating protein 11B;Rho GTPase-activating protein 11A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 321.8748 3 321.874788 962.602535 NaN NaN NaN -0.23548 -7.5795E-05 NaN NaN NaN NaN 62.908 0.18668 62.908 62.808 62.995 0 0 0 0 0.020184 1 36920 43.246 8.4386 1 NaN NaN 0 1817300 1817300 0 19637 1304 7415 7586 30729 30729 LALPGHAESYNPPPEYLLSEEER 23 0 1 Unmodified _LALPGHAESYNPPPEYLLSEEER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.431 3 871.094009 2610.2602 65035.3 0.50015 0.00043568 0.017227 1.5006E-05 0.51738 0.00045069 871.428272062857 874.76445132085 99.327 1.1932 99.327 98.636 99.829 0 675 97 11 0 0 0 5.4184E-10 2 60695 81.144 70.315 1 0.90455 1.0301 0 116010000 63911000 52104000 19638 1726 7416 7587 30730;30731 30731 LALPGHAESYNPPPEYLLSEEER 23 0 1 Unmodified _LALPGHAESYNPPPEYLLSEEER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.4301 3 871.094009 2610.2602 64960.31 0.72321 0.00062999 -0.02799 -2.4382E-05 0.69522 0.0006056 871.428236916935 874.430134372315 98.395 0.92854 98.395 97.971 98.9 0 576 79 10 0 0 0 2.3244E-12 2 61499 90.308 84.03 1 0.94021 1.0906 0 319680000 168920000 150770000 19639 1726 7416 7587 30732;30733 30733 LALPGHAESYNPPPEYLLSEEER 23 0 1 Unmodified _LALPGHAESYNPPPEYLLSEEER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 874.765 3 871.094009 2610.2602 64876.18 0.72239 0.00062927 -0.14891 -0.00012972 0.57348 0.00049955 871.428042305109 874.764236385516 111.43 1.0446 111.43 110.93 111.97 0 328 53 13 0 0 0 7.649E-06 2 64541 42.863 39.625 1 1.2535 1.0824 0 90786000 43555000 47231000 19640 1726 7416 7587 30734;30735 30735 LALPGHAESYNPPPEYLLSEEER 23 0 1 Unmodified _LALPGHAESYNPPPEYLLSEEER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 874.4307 3 871.094009 2610.2602 65050.56 0.35399 0.00030836 0.15965 0.00013907 0.51364 0.00044743 871.428307984222 874.764559874373 111.28 0.83432 111.28 110.85 111.68 -7.6294E-06 276 44 13 0 0 0 6.0638E-06 2 63417 44.258 40.152 1 1.2201 1.065 0 100380000 45443000 54939000 19641 1726 7416 7587 30736;30737 30736 LALPQSDASLLSR 13 0 1 Unmodified _LALPQSDASLLSR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;Q6P664 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.8862 2 685.885541 1369.75653 73939.09 0.74289 0.00050954 -0.10155 -6.965E-05 0.64135 0.00043989 685.88550470012 690.889623683444 93.358 0.78772 93.358 93.054 93.842 0 440 67 9 0 0 0 9.3579E-06 2 56528 100.88 100.88 1 0.92824 1.0975 0 266180000 140850000 125330000 19642 897 7417 7588 30738;30739 30739 LALPQSDASLLSR 13 0 1 Unmodified _LALPQSDASLLSR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;Q6P664 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.8869 2 685.885541 1369.75653 73857.28 0.6372 0.00043705 0.04806 3.2964E-05 0.68526 0.00047001 685.885622766689 690.889730212577 92.637 0.76091 92.637 92.324 93.085 0 394 62 8 0 0 0 9.654E-05 3 57293 92.866 92.866 1 0.92276 1.0639 0 230120000 108940000 121170000 19643 897 7417 7588 30740;30741;30742 30741 LALPQSDASLLSR 13 0 1 Unmodified _LALPQSDASLLSR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;Q6P664 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 690.89 2 685.885541 1369.75653 73655.81 0.6605 0.00045302 -0.22067 -0.00015135 0.43983 0.00030167 685.885433062244 690.889506462289 107 0.65504 107 106.61 107.26 0 276 41 9 0 0 0 0.00013248 2 61099 73.781 73.781 1 1.2267 1.0569 0 63439000 31165000 32275000 19644 897 7417 7588 30743;30744 30743 LALPQSDASLLSR 13 0 1 Unmodified _LALPQSDASLLSR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;Q6P664 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.8898 2 685.885541 1369.75653 73632.31 0.59657 0.00040918 0.094687 6.4944E-05 0.69125 0.00047412 685.885662598266 690.889718311471 106.7 0.76549 106.7 106.43 107.19 0 299 47 9 0 0 0 0.00012565 2 60069 78.342 78.342 1 1.2898 1.1253 0 51182000 22623000 28559000 19645 897 7417 7588 30745;30746 30745 LALQALTEK 9 1 0 Unmodified _LALQALTEK_ 0 0 0 B3KVX6;Q8TB01;Q6NWZ1;A0A024RBH2;Q07065 B3KVX6 B3KVX6 CKAP4 Cytoskeleton-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.8048 2 493.797675 985.580796 90547.88 0.34768 0.00017168 -1.1417 -0.00056377 -0.79402 -0.00039208 493.797134813422 497.804800453951 70.66 0.46005 70.66 70.408 70.868 0 102 36 4 0 0 0 0.029256 1 42264 46.334 27.894 1 0.95824 0.96663 0 7849400 3171100 4678400 19646 338 7418 7589 30747 30747 LALSPNAQVLALASGSSIHLYNTR 24 0 1 Unmodified _LALSPNAQVLALASGSSIHLYNTR_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.1249 3 832.790484 2495.34962 66889.19 0.78771 0.000656 0.45717 0.00038072 1.2449 0.0010367 833.12511225905 836.12726501947 116.76 0.63016 116.76 116.4 117.03 0 181 42 6 0 0 0 1.4694E-12 3 74628 72.935 72.935 1 0.85717 0.91015 0 42323000 23441000 18881000 19647 582 7419 7590 30748;30749;30750 30749 LALSPNAQVLALASGSSIHLYNTR 24 0 1 Unmodified _LALSPNAQVLALASGSSIHLYNTR_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.1251 3 832.790484 2495.34962 66227.04 0.88856 0.00073998 0.49784 0.0004146 1.3864 0.0011546 833.125050953507 836.461246032976 116.19 0.52166 116.19 115.91 116.44 0 164 33 6 0 0 0 3.7518E-16 3 76056 91.733 91.733 1 0.92993 1.0355 0 43649000 22439000 21209000 19648 582 7419 7590 30751;30752;30753 30753 LALSPNAQVLALASGSSIHLYNTR 24 0 1 Unmodified _LALSPNAQVLALASGSSIHLYNTR_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 836.1274 3 832.790484 2495.34962 67619.27 1.0038 0.00083592 0.21326 0.0001776 1.217 0.0010135 833.124899056638 836.4610239797 128.68 0.46326 128.68 128.47 128.93 0 147 20 11 0 0 0 3.3641E-09 2 77705 52.898 52.898 1 0.89437 0.76006 0 34109000 18235000 15874000 19649 582 7419 7590 30754;30755 30754 LALSPNAQVLALASGSSIHLYNTR 24 0 1 Unmodified _LALSPNAQVLALASGSSIHLYNTR_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 836.4615 3 832.790484 2495.34962 67383.2 0.91926 0.00076555 -0.241 -0.0002007 0.67826 0.00056485 833.12451549199 836.460579957909 128.42 0.4379 128.42 128.28 128.72 0 129 18 12 0 0 0 2.7543E-05 2 76703 36.736 36.736 1 0.93903 0.77009 0 13615000 7744200 5870600 19650 582 7419 7590 30756;30757 30757 LALSQNQQSSGAAGPTGK 18 1 0 Unmodified _LALSQNQQSSGAAGPTGK_ 0 0 0 Q6PKC2;Q86Y74;B4DJ96;A8K3C5;J3KPP4;O95232;D6RDI2 Q6PKC2 Q6PKC2 CROP;LUC7L3 Luc7-like protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.9478 2 857.939564 1713.86458 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.114 1 33.114 32.614 33.614 0 0 0 0 3.8767E-07 1 16474 92.856 60.251 1 19651 722 7420 7591 30758 30758 LALSQNQQSSGAAGPTGK 18 1 0 Unmodified _LALSQNQQSSGAAGPTGK_ 0 0 0 Q6PKC2;Q86Y74;B4DJ96;A8K3C5;J3KPP4;O95232;D6RDI2 Q6PKC2 Q6PKC2 CROP;LUC7L3 Luc7-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.9467 2 857.939564 1713.86458 67077.83 0.94226 0.00080841 1.9822 0.0017006 2.9244 0.002509 858.444205250381 861.946614472524 32.657 0.35492 32.657 32.478 32.832 3.8147E-06 120 31 6 0 0 0 3.0304E-12 2 16242 110.38 110.38 1 0.3555 0.36206 0 26067000 20236000 5831100 19652 722 7420 7591 30759;30760 30760 LALSQNQQSSGAAGPTGK 18 1 0 Unmodified _LALSQNQQSSGAAGPTGK_ 0 0 0 Q6PKC2;Q86Y74;B4DJ96;A8K3C5;J3KPP4;O95232;D6RDI2 Q6PKC2 Q6PKC2 CROP;LUC7L3 Luc7-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 858.4438 2 857.939564 1713.86458 66481.2 0.57977 0.00049741 1.4441 0.0012389 2.0238 0.0017363 858.444007682564 861.946902509486 38.025 1.052 38.025 37.843 38.895 0 210 81 6 0 0 0 5.932E-05 1 17243 55.213 49.11 1 0.36085 0.28624 0 4543800 3329400 1214400 19653 722 7420 7591 30761 30761 LALSVGTDK 9 1 0 Unmodified _LALSVGTDK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.2679 2 452.260925 902.507297 89410.52 0.28774 0.00013014 0.0092561 4.1862E-06 0.297 0.00013432 452.260721015279 456.268070073107 51.398 0.72329 51.398 51.201 51.924 -3.8147E-06 248 64 6 0 0 0 2.2298E-05 1 28447 116.25 78.117 1 0.97577 1.1434 0 294190000 134520000 159670000 19654 580 7421 7592 30762 30762 LALSVGTDK 9 1 0 Unmodified _LALSVGTDK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.2681 2 452.260925 902.507297 89308.38 0.15462 6.9928E-05 -0.080457 -3.6388E-05 0.074162 3.354E-05 452.260810625137 456.267935515069 50.146 0.58088 50.146 49.964 50.545 0 235 52 6 0 0 0 0.00033904 1 28311 101.54 74.405 1 0.94189 1.0678 0 138290000 67306000 70983000 19655 580 7421 7592 30763 30763 LALSVGTDK 9 1 0 Unmodified _LALSVGTDK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 456.2682 2 452.260925 902.507297 88787.44 0.10022 4.5327E-05 -0.26731 -0.00012089 -0.16709 -7.5566E-05 452.260466935674 456.267927623968 58.727 1.1091 58.727 58.517 59.626 0 232 86 6 0 0 0 0.0016671 1 29881 82.426 56.532 1 1.1563 0.94176 0 31401000 13067000 18334000 19656 580 7421 7592 30764 30764 LALSVGTDK 9 1 0 Unmodified _LALSVGTDK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 456.2678 2 452.260925 902.507297 88660.98 -0.034803 -1.574E-05 -0.031541 -1.4265E-05 -0.066345 -3.0005E-05 452.260534358648 456.268086712182 59.128 1.2013 59.128 58.84 60.042 0 268 92 7 0 0 0 0.0016671 1 29450 82.426 56.532 1 1.1804 0.96816 0 27386000 12308000 15078000 19657 580 7421 7592 30765 30765 LALTGVPIVQWPK 13 1 0 Unmodified _LALTGVPIVQWPK_ 0 0 0 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.4303 2 711.429387 1420.84422 73595.28 1.1277 0.00080227 -0.63828 -0.00045409 0.48942 0.00034819 711.930262329128 715.436083955039 120.06 0.31914 120.06 119.9 120.22 0 75 23 5 0 0 0 0.00049974 1 79275 61.65 59.03 1 0.43081 0.42807 0 6158000 3796800 2361200 19658 1323 7422 7593 30766 30766 LALTGVPIVQWPK 13 1 0 Unmodified _LALTGVPIVQWPK_ 0 0 0 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 715.4376 2 711.429387 1420.84422 74141.37 1.1982 0.00085243 -0.48482 -0.00034491 0.71337 0.00050751 711.429504481169 715.435902770508 132.75 0.27681 132.75 132.63 132.91 0 39 11 5 0 0 0 0.055709 2 79876 28.013 28.013 1 0.87218 0.72276 0 1739700 710610 1029000 19659 1323 7422 7593 30767;30768 30768 LALVISELEGK 11 1 0 Unmodified _LALVISELEGK_ 0 0 0 A0A024RCP3;Q12899;A2AE48 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.3495 2 586.350271 1170.68599 81749.66 0.72723 0.00042641 -0.30461 -0.00017861 0.42263 0.00024781 586.349887219114 590.357233037495 106.58 0.66177 106.58 106.31 106.97 0 183 49 5 0 0 0 4.6535E-10 2 66105 130.66 115.04 1 0.67676 0.66388 0 20561000 11533000 9027900 19660 365 7423 7594 30769;30770 30770 LALVISELEGK 11 1 0 Unmodified _LALVISELEGK_ 0 0 0 A0A024RCP3;Q12899;A2AE48 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.3504 2 586.350271 1170.68599 80673.82 0.82161 0.00048175 -0.14923 -8.7502E-05 0.67238 0.00039425 586.349994818887 590.357385913559 105.95 0.60486 105.95 105.58 106.18 0 196 46 5 0 0 0 2.8396E-05 2 67227 101.65 86.98 1 0.6728 0.73827 0 41302000 23881000 17421000 19661 365 7423 7594 30771;30772 30772 LALVTGGEIASTFDHPELVK 20 1 0 Unmodified _LALVTGGEIASTFDHPELVK_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3858 3 699.7124 2096.11537 73027.72 0.81355 0.00056925 0.23858 0.00016694 1.0521 0.00073619 700.047437776691 702.384174454737 111.01 0.52852 111.01 110.82 111.35 0 145 35 6 0 0 0 1.3966E-06 2 69728 58.49 58.49 1 3.6528 3.9479 0 42617000 8181800 34435000 19662 1255 7424 7595 30773;30774 30773 LALVTGGEIASTFDHPELVK 20 1 0 Unmodified _LALVTGGEIASTFDHPELVK_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.7195 3 699.7124 2096.11537 73497.05 0.82259 0.00057558 0.1939 0.00013568 1.0165 0.00071126 699.712508808673 702.383965559174 110.38 0.54546 110.38 110.09 110.64 0 168 37 6 0 0 0 2.4046E-08 3 70975 86.8 86.8 1 4.242 4.3122 0 30193000 7939700 22253000 19663 1255 7424 7595 30775;30776;30777 30775 LALVTGGEIASTFDHPELVK 20 1 0 Unmodified _LALVTGGEIASTFDHPELVK_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.7184 3 699.7124 2096.11537 72287.58 0.80325 0.00056204 0.38818 0.00027162 1.1914 0.00083366 699.713090319848 702.718070362949 121.92 0.36465 121.92 121.74 122.11 7.6294E-06 63 18 5 0 0 0 0.029105 1 72644 16.716 16.716 1 3.1064 2.4807 0 9195200 3128400 6066800 19664 1255 7424 7595 30778 30778 LAMQLEEQASR 11 0 1 Oxidation (M) _LAM(ox)QLEEQASR_ LAM(1)QLEEQASR LAM(99.82)QLEEQASR 0 1 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.8207 2 646.319177 1290.6238 78098.79 0.75686 0.00048917 -0.00053986 -3.4892E-07 0.75632 0.00048882 646.319565322677 651.323123421548 33.582 0.39218 33.582 33.373 33.765 -3.8147E-06 120 38 4 0 0 0 1.8445E-05 2 16708 99.815 79.674 1 1.5231 1.56 0 14472000 5283900 9187700 19665 626 7425 7596 30779;30780 30780 484 LAMQLEEQASR 11 0 1 Oxidation (M) _LAM(ox)QLEEQASR_ LAM(1)QLEEQASR LAM(105.2)QLEEQASR 0 1 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3215 2 646.319177 1290.6238 76503.84 0.38655 0.00024983 -0.33553 -0.00021686 0.051024 3.2978E-05 646.319268759547 651.323052277529 32.94 0.4008 32.94 32.75 33.151 0 136 37 5 0 0 0 9.3472E-06 2 16369 105.2 67.554 1 1.3697 1.4333 0 22662000 10810000 11853000 19666 626 7425 7596 30781;30782 30782 484 LANFIPWGPASIQVALSR 18 0 1 Unmodified _LANFIPWGPASIQVALSR_ 0 0 0 A0A1B4Z394;Q9NRH3;P23258 A0A1B4Z394 A0A1B4Z394 TUBG2;TUBG1 Tubulin gamma-2 chain;Tubulin gamma-1 chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.5483 2 970.54126 1939.06797 NaN NaN NaN -0.11082 -0.00010756 NaN NaN NaN NaN 132.07 0.29156 132.07 131.93 132.23 1.5259E-05 0 0 0 0.010759 1 88474 41.242 28.262 1 NaN NaN 0 2221200 0 2221200 19667 637 7426 7597 30783 30783 LANILFTQELAR 12 0 1 Unmodified _LANILFTQELAR_ 0 0 0 H0YIZ8;G3V2G6;B3KQ19;A0A0S2Z583;Q8TC12;H0YJ10;G3V234;H0YJ46;A0A0S2Z575 H0YIZ8 H0YIZ8 RDH11 Retinol dehydrogenase 11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.9046 2 694.898451 1387.78235 NaN NaN NaN 0.062268 4.327E-05 NaN NaN NaN NaN 108.7 0.49168 108.7 108.52 109.02 0 0 0 0 0.00033594 1 67935 90.05 68.602 1 NaN NaN 0 10085000 0 10085000 19668 577 7427 7598 30784 30784 LANILFTQELAR 12 0 1 Unmodified _LANILFTQELAR_ 0 0 0 H0YIZ8;G3V2G6;B3KQ19;A0A0S2Z583;Q8TC12;H0YJ10;G3V234;H0YJ46;A0A0S2Z575 H0YIZ8 H0YIZ8 RDH11 Retinol dehydrogenase 11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.903 2 694.898451 1387.78235 NaN NaN NaN -0.30722 -0.00021349 NaN NaN NaN NaN 108.06 0.45305 108.06 107.89 108.34 0 0 0 0 0.0013862 1 69042 78.653 61.982 1 NaN NaN 0 6507200 0 6507200 19669 577 7427 7598 30785 30785 LANLPEEVIQK 11 1 0 Unmodified _LANLPEEVIQK_ 0 0 0 P52701;A0A087WYT6;Q6LAI4 P52701 P52701 MSH6 DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3672 2 627.358628 1252.7027 77901.18 0.74833 0.00046947 0.64404 0.00040405 1.3924 0.00087352 627.359101956111 631.367057850495 77.778 0.39544 77.778 77.575 77.97 0 137 33 6 0 0 0 0.0004027 2 47024 81.263 81.263 1 1.0205 1.0448 0 25608000 12648000 12960000 19670 1601 7428 7599 30786;30787 30786 LAPAHVDEQVFLYENAR 17 0 1 Unmodified _LAPAHVDEQVFLYENAR_ 0 0 0 A0A024RBU4;O96006 A0A024RBU4 A0A024RBU4 hCG_1981838;ZBED1 Zinc finger BED domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.3365 3 658.002285 1970.98503 78594.24 0.46974 0.00030909 -0.92923 -0.00061144 -0.4595 -0.00030235 658.002093878487 661.671845560193 96.143 0.39438 96.143 95.931 96.326 0 87 25 5 0 0 0 0.057308 1 53063 12.714 8.0043 1 0.77656 0.69234 0 1955300 1277900 677360 19671 347 7429 7600 30788 30788 LAPDYDALDVANK 13 1 0 Unmodified _LAPDYDALDVANK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7;B9EJE3 H7BY10 H7BY10 RPL23A;RPL23AL 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.8547 2 702.853906 1403.69326 72297.37 0.70216 0.00049352 -0.22874 -0.00016077 0.47342 0.00033275 702.854517292958 706.860625706201 79.074 1.9089 79.074 78.631 80.54 0 1012 167 12 0 0 0 0.00010871 5 47146 91.855 91.549 1 0.62634 0.77398 0 6992500000 4267400000 2725000000 19672 796 7430 7601 30789;30790;30791;30792;30793 30791 LAPDYDALDVANK 13 1 0 Unmodified _LAPDYDALDVANK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7;B9EJE3 H7BY10 H7BY10 RPL23A;RPL23AL 60S ribosomal protein L23a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.8602 2 702.853906 1403.69326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.454 1 80.454 79.954 80.954 0 0 0 0 0.0038707 1 47835 62.466 34.724 1 19673 796 7430 7601 30794 30794 LAPDYDALDVANK 13 1 0 Unmodified _LAPDYDALDVANK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7;B9EJE3 H7BY10 H7BY10 RPL23A;RPL23AL 60S ribosomal protein L23a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.8549 2 702.853906 1403.69326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.763 1 80.763 80.263 81.263 0 0 0 0 0.0016498 1 48055 71.03 47.658 1 19674 796 7430 7601 30795 30795 LAPDYDALDVANK 13 1 0 Unmodified _LAPDYDALDVANK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7;B9EJE3 H7BY10 H7BY10 RPL23A;RPL23AL 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.8539 2 702.853906 1403.69326 72040.77 0.47763 0.00033571 -0.19615 -0.00013786 0.28149 0.00019784 702.854749015883 706.860689755323 78.111 2.4536 78.111 77.729 80.183 0 1037 206 13 0 0 0 2.058E-13 6 47135 129.16 129.16 1 0.65463 0.77628 0 3864200000 2369900000 1494300000 19675 796 7430 7601 30796;30797;30798;30799;30800;30801 30796 LAPDYDALDVANK 13 1 0 Unmodified _LAPDYDALDVANK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7;B9EJE3 H7BY10 H7BY10 RPL23A;RPL23AL 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.8545 2 702.853906 1403.69326 71171.6 0.61521 0.0004324 -0.20931 -0.00014711 0.4059 0.00028529 702.855096392506 706.860737411128 90.345 3.3869 90.345 89.923 93.309 7.6294E-06 1141 215 12 0 0 0 0.00013633 6 50370 81.017 81.017 1 0.81062 0.73499 0 888510000 492390000 396120000 19676 796 7430 7601 30802;30803;30804;30805;30806;30807 30804 LAPDYDALDVANK 13 1 0 Unmodified _LAPDYDALDVANK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7;B9EJE3 H7BY10 H7BY10 RPL23A;RPL23AL 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.855 2 702.853906 1403.69326 71066.4 0.40867 0.00028724 -0.13537 -9.5143E-05 0.2733 0.00019209 702.855046033157 706.860840665365 90.283 2.918 90.283 89.879 92.797 7.6294E-06 1082 180 14 0 0 0 1.0249E-08 7 49538 114.83 114.83 1 0.8027 0.7084 0 844900000 455900000 389010000 19677 796 7430 7601 30808;30809;30810;30811;30812;30813;30814 30810 LAPGGHVGR 9 0 1 Unmodified _LAPGGHVGR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.2458 2 432.245944 862.477334 88842.34 0.085405 3.6916E-05 -0.008055 -3.4817E-06 0.07735 3.3434E-05 432.245958512088 437.249972054574 16.592 0.69027 16.592 16.452 17.143 0 138 26 9 0 0 0 0.004147 1 3860 69.998 48.452 1 0.88098 1.0144 0 147990000 78634000 69355000 19678 1548 7431 7602 30815 30815 LAPGGHVGR 9 0 1 Unmodified _LAPGGHVGR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 432.2458 2 432.245944 862.477334 89726.87 -0.41648 -0.00018002 0.61918 0.00026764 0.20271 8.7619E-05 432.246108316544 437.250229427229 17.192 0.22609 17.192 17.081 17.307 0 53 10 8 0 0 0 0.023203 1 3664 48.756 31.829 1 0.92229 0.78364 0 5261100 2762400 2498700 19679 1548 7431 7602 30816 30816 LAPITSDPTEATAVGAVEASFK 22 1 0 Unmodified _LAPITSDPTEATAVGAVEASFK_ 0 0 0 V9HWB8;P14618;B4DNK4;Q8WUW7;Q9UKK4;Q9UK31 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1088.0624 2 1088.06262 2174.11068 59431.25 0.39339 0.00042803 -0.59115 -0.00064321 -0.19777 -0.00021518 1088.56432365462 1092.57013651607 114.85 0.50266 114.85 114.61 115.12 0 218 31 10 0 0 0 5.3216E-08 2 72876 68.173 68.173 1 2.8028 3.0952 0 56823000 14923000 41900000 19680 1481 7432 7603 30817;30818 30818 LAPITSDPTEATAVGAVEASFK 22 1 0 Unmodified _LAPITSDPTEATAVGAVEASFK_ 0 0 0 V9HWB8;P14618;B4DNK4;Q8WUW7;Q9UKK4;Q9UK31 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1088.0637 2 1088.06262 2174.11068 59945.3 0.36718 0.00039951 -0.30606 -0.00033301 0.061121 6.6504E-05 1088.56416907054 1092.06939872628 114.4 0.55774 114.4 114.14 114.7 7.6294E-06 226 37 9 0 0 0 2.0869E-08 2 74324 73.983 73.983 1 2.8208 3.1836 0 64638000 14955000 49683000 19681 1481 7432 7603 30819;30820 30820 LAPITSDPTEATAVGAVEASFK 22 1 0 Unmodified _LAPITSDPTEATAVGAVEASFK_ 0 0 0 V9HWB8;P14618;B4DNK4;Q8WUW7;Q9UKK4;Q9UK31 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1092.5706 2 1088.06262 2174.11068 58989.47 0.2435 0.00026495 0.20398 0.00022194 0.44748 0.00048689 1088.56431749948 1092.57138034327 126.73 0.5403 126.73 126.42 126.96 7.6294E-06 156 20 12 0 0 0 3.7904E-11 2 76189 89.484 89.484 1 1.7613 1.427 0 24436000 9108900 15327000 19682 1481 7432 7603 30821;30822 30821 LAPITSDPTEATAVGAVEASFK 22 1 0 Unmodified _LAPITSDPTEATAVGAVEASFK_ 0 0 0 V9HWB8;P14618;B4DNK4;Q8WUW7;Q9UKK4;Q9UK31 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1088.5648 2 1088.06262 2174.11068 58782.38 0.10017 0.00010899 -0.02144 -2.3328E-05 0.078729 8.5662E-05 1088.06269729395 1092.06970239428 126.6 0.50102 126.6 126.37 126.87 -7.6294E-06 157 21 11 0 0 0 1.3803E-11 2 75232 96.208 96.208 1 1.7272 1.43 0 33751000 12335000 21417000 19683 1481 7432 7603 30823;30824 30824 LAQAEAAGLHK 11 1 0 Unmodified _LAQAEAAGLHK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 372.8801 3 370.208495 1107.60366 96968.01 0.28667 0.00010613 -0.385 -0.00014253 -0.098328 -3.6402E-05 370.20827574875 372.879780187042 21.59 0.47068 21.59 21.389 21.86 1.9073E-06 140 27 8 0 0 0 0.0055062 2 7809 45.077 45.077 1 0.59202 0.6603 0 62084000 38119000 23965000 19684 1679 7433 7604 30825;30826 30825 LAQAEAAGLHK 11 1 0 Unmodified _LAQAEAAGLHK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.8085 2 554.809105 1107.60366 NaN NaN NaN 1.6605 0.00092127 NaN NaN NaN NaN 21.571 0.45412 21.571 21.33 21.784 0 0 0 0 6.272E-08 2 7853 109.66 38.284 1 NaN NaN 0 32288000 32288000 0 19685 1679 7433 7604 30827;30828 30828 LAQAEAAGLHK 11 1 0 Unmodified _LAQAEAAGLHK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 372.88 3 370.208495 1107.60366 97991.23 -0.075217 -2.7846E-05 -0.13758 -5.0934E-05 -0.2128 -7.878E-05 370.208428573707 372.879768797497 21.422 0.50146 21.422 21.243 21.744 0 83 23 8 0 0 0 0.0011356 2 7522 59.367 55.834 1 0.52335 0.58992 0 67815000 44590000 23225000 19686 1679 7433 7604 30829;30830 30829 LAQAEAAGLHK 11 1 0 Unmodified _LAQAEAAGLHK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.8173 2 554.809105 1107.60366 81625.82 0.27524 0.0001527 0.22194 0.00012313 0.49717 0.00027584 554.809155720578 558.816392659992 23.466 0.43078 23.466 23.249 23.68 1.9073E-06 106 21 8 0 0 0 0.00047724 2 7886 93.178 93.178 1 1.0526 0.84374 0 7440000 3687500 3752500 19687 1679 7433 7604 30831;30832 30832 LAQAEAAGLHK 11 1 0 Unmodified _LAQAEAAGLHK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.8092 2 554.809105 1107.60366 80486.22 0.39574 0.00021956 -0.034459 -1.9118E-05 0.36128 0.00020044 554.809022342497 558.816261950453 23.401 0.41268 23.401 23.149 23.562 0 90 18 7 0 0 0 0.0011549 2 7375 85.67 69.13 1 1.0808 0.88067 0 7542200 3782500 3759800 19688 1679 7433 7604 30833;30834 30834 LAQALHEMR 9 0 1 Oxidation (M) _LAQALHEM(ox)R_ LAQALHEM(1)R LAQALHEM(86.67)R 0 1 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.7825 2 542.782033 1083.54951 85690.13 0.20343 0.00011042 0.67216 0.00036484 0.87559 0.00047525 542.782329194685 547.786278380971 18.868 0.3656 18.868 18.73 19.096 0 63 28 4 0 0 0 0.00064968 3 5711 86.67 78.33 1 1.8319 1.8529 0 9696500 3275100 6421400 19689 1502 7434 7605 30835;30836;30837 30837 1259 LAQALHEMR 9 0 1 Oxidation (M) _LAQALHEM(ox)R_ LAQALHEM(1)R LAQALHEM(103.55)R 0 1 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.7819 2 542.782033 1083.54951 81235.52 0.38013 0.00020633 0.63687 0.00034568 1.017 0.00055201 542.782097146106 547.786117515826 19.083 0.25633 19.083 18.939 19.196 0 59 14 7 0 0 0 0.00013702 2 5544 103.55 90.558 1 1.4773 1.6335 0 42000000 16442000 25558000 19690 1502 7434 7605 30838;30839 30839 1259 LAQDPYR 7 0 1 Unmodified _LAQDPYR_ 0 0 0 P18583 P18583 P18583 SON Protein SON ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 431.7249 2 431.72451 861.434466 NaN NaN NaN 1.1184 0.00048283 NaN NaN NaN NaN 22.967 0.3959 22.967 22.768 23.164 0 0 0 0 0.032702 1 8985 81.381 45.954 1 NaN NaN 0 7293600 7293600 0 19691 1499 7435 7606 30840 30840 LAQEGIYTLYPFINSR 16 0 1 Unmodified _LAQEGIYTLYPFINSR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 948.5023 2 942.996351 1883.97815 63213.05 0.71644 0.0006756 0.08118 7.6553E-05 0.79762 0.00075215 942.996616239233 948.000575506075 119.64 0.56705 119.64 119.39 119.96 0 232 36 9 0 0 0 0.00013486 3 76907 76.588 71.548 1 1.3242 1.4117 0 43855000 19774000 24082000 19692 1694 7436 7607 30841;30842;30843 30842 LAQEGIYTLYPFINSR 16 0 1 Unmodified _LAQEGIYTLYPFINSR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 942.9977 2 942.996351 1883.97815 63211.17 0.76183 0.00071841 0.14281 0.00013467 0.90464 0.00085308 943.497668162713 948.000597403676 119.16 0.49714 119.16 118.91 119.4 7.6294E-06 216 33 8 0 0 0 8.3788E-07 2 78402 97.463 97.463 1 1.2514 1.4448 0 55529000 26165000 29364000 19693 1694 7436 7607 30844;30845 30845 LAQEGIYTLYPFINSR 16 0 1 Unmodified _LAQEGIYTLYPFINSR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 943.4987 2 942.996351 1883.97815 62692.36 0.77664 0.00073237 0.0092685 8.7402E-06 0.78591 0.00074111 943.497700343845 948.502080702075 131.84 0.50816 131.84 131.59 132.1 0 156 23 10 0 0 0 0.0001534 2 80017 67.964 67.964 1 0.78163 0.63948 0 13464000 7912600 5551900 19694 1694 7436 7607 30846;30847 30846 LAQEGIYTLYPFINSR 16 0 1 Unmodified _LAQEGIYTLYPFINSR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 948.5024 2 942.996351 1883.97815 62716.27 0.97524 0.00091965 0.4752 0.00044811 1.4504 0.0013678 942.996761150179 948.000935625525 131.6 0.60667 131.6 131.34 131.95 0 128 22 10 0 0 0 0.00033972 2 78968 53.377 53.377 1 0.82013 0.66605 0 12170000 6378400 5791800 19695 1694 7436 7607 30848;30849 30849 LAQEPLGLEVDQFLEDVR 18 0 1 Unmodified _LAQEPLGLEVDQFLEDVR_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1036.5397 2 1036.03894 2070.06334 NaN NaN NaN -0.19628 -0.00020335 NaN NaN NaN NaN 133.29 0.34929 133.29 133.04 133.39 0 0 0 0 2.3371E-23 1 87270 124.62 91.211 1 NaN NaN 0 22109000 22109000 0 19696 1068 7437 7608 30850 30850 LAQEPLGLEVDQFLEDVR 18 0 1 Unmodified _LAQEPLGLEVDQFLEDVR_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1036.5455 2 1036.03894 2070.06334 59334.33 0.59656 0.00061806 0.25572 0.00026494 0.85228 0.000883 1036.54067990996 1041.04396815261 133.11 0.47527 133.11 132.79 133.26 0 81 20 6 0 0 0 0.00084967 1 89156 40.066 40.066 1 1.0218 1.1237 0 40750000 20362000 20388000 19697 1068 7437 7608 30851 30851 LAQETDIFK 9 1 0 Unmodified _LAQETDIFK_ 0 0 0 Q8NDD1;Q5TBH9;Q5TBI2 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.792 2 532.784764 1063.55498 NaN NaN NaN -0.90371 -0.00048148 NaN NaN NaN NaN 63.053 0.62606 63.053 62.68 63.306 0 0 0 0 0.00016738 1 36104 94.114 42.327 1 NaN NaN 0 6317900 0 6317900 19698 1925 7438 7609 30852 30852 LAQFDYGR 8 0 1 Unmodified _LAQFDYGR_ 0 0 0 Q9NVI7;H0Y2W2;Q96T67;Q5T9A4;Q9H834;Q5T2N8;Q5SV16;Q8N3E6 Q9NVI7 Q9NVI7 ATAD3A;ATAD3B;ATAD3C;DKFZp761L1023 ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.2472 2 485.243067 968.47158 88348.38 0.19806 9.611E-05 0.7855 0.00038116 0.98357 0.00047727 485.243510561755 490.247388887649 47.939 0.64139 47.939 47.56 48.201 0 137 55 4 0 0 0 0.011008 1 25981 70.919 25.201 1 1.3333 1.3875 0 21934000 9376100 12557000 19699 2074 7439 7610 30853 30853 LAQFEPSQR 9 0 1 Unmodified _LAQFEPSQR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.2816 2 538.28018 1074.54581 81806.74 0.70387 0.00037888 0.70411 0.00037901 1.408 0.00075789 538.28030414798 543.284727870412 34.865 0.92072 34.865 34.433 35.354 0 307 65 8 0 0 0 0.00033904 1 17642 101.54 45.866 1 1.2008 1.3857 0 239590000 111870000 127720000 19700 1691 7440 7611 30854 30854 LAQFIGNR 8 0 1 Unmodified _LAQFIGNR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.7653 2 459.761426 917.5083 88601.75 0.41187 0.00018936 -0.17496 -8.0439E-05 0.23691 0.00010892 459.76130710308 464.765363203416 46.677 0.60055 46.677 46.248 46.849 3.8147E-06 197 51 7 0 0 0 0.012693 1 25090 67.032 14.349 1 0.82796 0.97945 0 304540000 169620000 134920000 19701 785 7441 7612 30855 30855 LAQFIGNR 8 0 1 Unmodified _LAQFIGNR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.761 2 459.761426 917.5083 87693.14 0.25911 0.00011913 0.0033008 1.5176E-06 0.26241 0.00012065 459.761420728829 464.765423601952 45.732 0.60022 45.732 45.356 45.956 0 254 52 7 0 0 0 0.003183 2 25114 97.596 48.006 1 0.69283 0.80537 0 378740000 210520000 168220000 19702 785 7441 7612 30856;30857 30857 LAQFIGNR 8 0 1 Unmodified _LAQFIGNR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.7654 2 459.761426 917.5083 87238.52 0.22595 0.00010388 -0.72425 -0.00033298 -0.49831 -0.0002291 459.761159954065 464.765050729668 53.191 0.95247 53.191 52.825 53.778 0 314 71 6 0 0 0 0.01271 1 26256 66.993 13.283 1 0.91988 0.78206 0 34427000 18026000 16401000 19703 785 7441 7612 30858 30858 LAQFIGNR 8 0 1 Unmodified _LAQFIGNR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 459.7614 2 459.761426 917.5083 88709.15 -0.039593 -1.8203E-05 0.030997 1.4251E-05 -0.0085951 -3.9517E-06 459.76146833434 464.76539643102 53.479 0.98872 53.479 53.05 54.038 0 371 69 8 0 0 0 0.02092 1 25923 58.167 47.7 1 0.92101 0.80341 0 28039000 14630000 13409000 19704 785 7441 7612 30859 30859 LAQFIGNRR 9 0 2 Unmodified _LAQFIGNRR_ 0 0 1 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 365.5487 3 358.87708 1073.60941 101232.3 -0.046015 -1.6514E-05 -0.26709 -9.5854E-05 -0.31311 -0.00011237 358.876963804702 365.549208675331 33.704 0.58366 33.704 33.547 34.131 0 164 48 6 0 0 0 0.015185 1 14265 30.254 6.2242 1 0.93837 0.85648 0 8379400 4185900 4193400 19705 785 7442 7613 30860 30860 LAQGHTTVDELAR 13 0 1 Unmodified _LAQGHTTVDELAR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.252 3 470.91604 1409.72629 87182.1 0.1511 7.1157E-05 0.025014 1.178E-05 0.17612 8.2936E-05 470.916026003872 474.25219583568 34.33 0.46091 34.33 34.16 34.621 0 215 37 8 0 0 0 4.0774E-05 2 17141 69.716 55.029 1 1.9104 2.1236 0 74205000 26280000 47925000 19706 1754 7443 7614 30861;30862 30862 LAQGHTTVDELAR 13 0 1 Unmodified _LAQGHTTVDELAR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.876 2 705.870422 1409.72629 72091.34 0.58892 0.0004157 -0.0092351 -6.5188E-06 0.57969 0.00040918 705.870436519444 710.874529541174 34.309 0.35257 34.309 34.18 34.533 0 112 29 6 0 0 0 1.336E-09 2 17137 123.95 82.072 1 2.0568 2.1042 0 32342000 10636000 21706000 19707 1754 7443 7614 30863;30864 30864 LAQGHTTVDELAR 13 0 1 Unmodified _LAQGHTTVDELAR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.8705 2 705.870422 1409.72629 72532.03 0.18573 0.0001311 0.71046 0.00050149 0.8962 0.0006326 705.870701800613 710.875018069121 33.339 0.30193 33.339 33.161 33.463 0 123 26 7 0 0 0 1.146E-13 2 16631 133.05 133.05 1 1.8593 2.1182 0 49549000 18249000 31300000 19708 1754 7443 7614 30865;30866 30865 LAQGHTTVDELAR 13 0 1 Unmodified _LAQGHTTVDELAR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.9152 3 470.91604 1409.72629 87861.08 -0.19608 -9.2339E-05 0.3735 0.00017589 0.17742 8.355E-05 470.916197011191 474.252341155769 33.335 0.46243 33.335 33.118 33.58 0 228 39 9 0 0 0 1.3842E-14 2 16641 110.92 110.92 1 1.824 2.0749 0 116640000 41999000 74644000 19709 1754 7443 7614 30867;30868 30867 LAQGHTTVDELAR 13 0 1 Unmodified _LAQGHTTVDELAR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 470.916 3 470.91604 1409.72629 87951.6 0.063381 2.9847E-05 0.054211 2.5529E-05 0.11759 5.5376E-05 470.915968134005 474.252190035549 39.175 0.44555 39.175 39.018 39.463 0 131 33 6 0 0 0 0.0015322 1 17387 49.333 46.018 1 2.5229 2.0931 0 5339700 1457300 3882400 19710 1754 7443 7614 30869 30869 LAQGLTHLGK 10 1 0 Unmodified _LAQGLTHLGK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q13041 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 349.2135 3 346.541586 1036.60293 104048.9 0.023559 8.1642E-06 0.17866 6.1914E-05 0.20222 7.0078E-05 346.54156978986 349.212938301523 35.26 0.35207 35.26 35.08 35.432 0 135 31 6 0 0 0 0.022551 1 17682 26.786 18.093 1 1.872 2.023 0 35315000 11816000 23498000 19711 1707 7444 7615 30870 30870 LAQGLTHLGK 10 1 0 Unmodified _LAQGLTHLGK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q13041 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.3079 2 519.308741 1036.60293 84221.25 0.34028 0.00017671 -0.3703 -0.0001923 -0.030021 -1.559E-05 519.308451699118 523.31575710553 35.284 0.32074 35.284 35.092 35.412 0 77 28 5 0 0 0 0.0010279 1 17718 77.355 61.153 1 2.5821 2.5379 0 20112000 6191000 13921000 19712 1707 7444 7615 30871 30871 LAQGLTHLGK 10 1 0 Unmodified _LAQGLTHLGK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q13041 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 346.5416 3 346.541586 1036.60293 103683.2 0.014111 4.8899E-06 0.15072 5.2231E-05 0.16483 5.7121E-05 346.54150480352 349.212935590877 33.868 0.39146 33.868 33.726 34.117 0 108 31 5 0 0 0 0.017302 2 17072 26.971 19.692 1 2.4315 2.5406 0 34319000 9131500 25187000 19713 1707 7444 7615 30872;30873 30873 LAQGLTHLGK 10 1 0 Unmodified _LAQGLTHLGK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q13041 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.316 2 519.308741 1036.60293 86502.09 0.382 0.00019837 -0.27896 -0.00014487 0.10303 5.3506E-05 519.308493075282 523.315633324375 33.881 0.29388 33.881 33.75 34.044 0 67 24 4 0 0 0 0.025149 1 17093 44.753 44.753 1 2.5766 2.7811 0 21833000 5150200 16683000 19714 1707 7444 7615 30874 30874 LAQICSSIR 9 0 1 Unmodified _LAQICSSIR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.2852 2 524.284408 1046.55426 83611.56 0.22678 0.0001189 0.40238 0.00021096 0.62917 0.00032986 524.28458716398 529.288663814062 47.064 0.73165 47.064 46.694 47.426 0 315 68 7 0 0 0 0.0012793 2 25388 87.476 39.628 1 0.89207 1.0122 0 108600000 57327000 51275000 19715 1789 7445 7616 30875;30876 30876 LAQICSSIR 9 0 1 Unmodified _LAQICSSIR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.2885 2 524.284408 1046.55426 81862.88 0.16065 8.4228E-05 0.19023 9.9737E-05 0.35089 0.00018397 524.284460908227 529.288646637012 46.029 0.51992 46.029 45.764 46.284 0 222 42 6 0 0 0 0.0014132 2 25209 85.731 34.853 1 0.86273 0.98302 0 134160000 71098000 63057000 19716 1789 7445 7616 30877;30878 30878 LAQLTLEQILEHLDNLR 17 0 1 Unmodified _LAQLTLEQILEHLDNLR_ 0 0 0 Q68E01 Q68E01 Q68E01 INTS3 Integrator complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.7253 3 673.712623 2018.11604 74285.23 0.3637 0.00024503 0.47838 0.00032229 0.84208 0.00056732 673.71264903559 677.383162425767 133.41 0.17586 133.41 133.29 133.46 0 13 4 5 0 0 0 1.4408E-26 2 87362 149.57 149.57 1 1.1949 1.2334 0 37007000 19293000 17714000 19717 1840 7446 7617 30879;30880 30879 LAQNILSYLDLK 12 1 0 Unmodified _LAQNILSYLDLK_ 0 0 0 A8K5J7;A0A024R6M6;Q9UL15 A8K5J7 A8K5J7 BAG5 BAG family molecular chaperone regulator 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.9087 2 695.90066 1389.78677 81637.37 0.47008 0.00032713 0.029478 2.0514E-05 0.49956 0.00034764 695.900647094162 699.908355416533 122.84 0.30653 122.84 122.65 122.96 0 52 20 5 0 0 0 0.0032963 1 79507 56.404 56.404 1 0.94538 1.0081 0 3649700 1664900 1984800 19718 205 7447 7618 30881 30881 LAQNILSYLDLK 12 1 0 Unmodified _LAQNILSYLDLK_ 0 0 0 A8K5J7;A0A024R6M6;Q9UL15 A8K5J7 A8K5J7 BAG5 BAG family molecular chaperone regulator 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.9077 2 695.90066 1389.78677 76000.73 0.86006 0.00059851 0.090302 6.2842E-05 0.95036 0.00066136 695.90044874727 699.907951363706 122.27 0.38329 122.27 122.04 122.42 7.6294E-06 49 28 4 0 0 0 0.00077083 1 81082 66.056 66.056 1 0.98482 1.0228 0 4656800 1859400 2797400 19719 205 7447 7618 30882 30882 LAQPYVGVFLK 11 1 0 Unmodified _LAQPYVGVFLK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;K7EQF8 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.871 2 617.863349 1233.71214 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.01 1 105.01 104.51 105.51 0 0 0 0 0.042727 1 64966 44.349 31.722 1 19720 946 7448 7619 30883 30883 LAQPYVGVFLK 11 1 0 Unmodified _LAQPYVGVFLK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;K7EQF8 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.871 2 617.863349 1233.71214 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.23 1 104.23 103.73 104.73 0 0 0 0 0.017971 1 66009 54.436 23.866 1 19721 946 7448 7619 30884 30884 LAQQMENRPSVQAALK 16 1 1 Oxidation (M) _LAQQM(ox)ENRPSVQAALK_ LAQQM(1)ENRPSVQAALK LAQQM(45.21)ENRPSVQAALK 0 1 1 X6R700;Q9Y3Y2;A0A087X1B7;Q5T7Y7 X6R700 X6R700 CHTOP Chromatin target of PRMT1 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.995 3 600.652599 1798.93597 78914.36 0.75892 0.00045585 0.23077 0.00013861 0.98969 0.00059446 600.98699744939 606.994564926836 36.894 0.31226 36.894 36.751 37.063 0 77 29 5 0 0 0 0.00035954 1 18743 45.207 20.931 1 0.73572 0.79879 0 15523000 8744200 6778500 19722 2141 7449 7620 30885 30885 1983 LAQQQAALLMQQEER 15 0 1 Oxidation (M) _LAQQQAALLM(ox)QQEER_ LAQQQAALLM(1)QQEER LAQQQAALLM(42.1)QQEER 0 1 0 Q13435;Q7Z3K9;E9PPJ0;E9PJ04;H0YCG1;E9PJT3 Q13435 Q13435 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 891.9547 2 886.951617 1771.88868 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.09 1 55.09 54.59 55.59 0 0 0 0 0.014227 1 31542 42.095 18.869 1 19723 1713 7450 7621 30886 30886 1542 LAQQVCHAIANISDR 15 0 1 Unmodified _LAQQVCHAIANISDR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.6291 3 565.958022 1694.85224 80406.63 0.69447 0.00039304 -0.06089 -3.4461E-05 0.63358 0.00035858 565.958018657059 569.294136001537 65.527 0.81541 65.527 65.138 65.954 0 422 73 8 0 0 0 2.094E-06 1 37663 78.69 59.861 1 0.76587 0.84958 0 67662000 36223000 31438000 19724 908 7451 7622 30887 30887 LAQQVCHAIANISDR 15 0 1 Unmodified _LAQQVCHAIANISDR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.9587 3 565.958022 1694.85224 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.224 1 65.224 64.724 65.724 0 0 0 0 0.033532 1 37550 33.313 21.84 1 19725 908 7451 7622 30888 30888 LAQQVCHAIANISDR 15 0 1 Unmodified _LAQQVCHAIANISDR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.3965 2 848.433395 1694.85224 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.48 1 65.48 64.98 65.98 7.6294E-06 0 0 0 0.012669 1 37709 45.077 30.658 1 19726 908 7451 7622 30889 30889 LAQQVCHAIANISDR 15 0 1 Unmodified _LAQQVCHAIANISDR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.2927 3 565.958022 1694.85224 78814.77 0.68711 0.00038888 -0.23697 -0.00013412 0.45014 0.00025476 565.957885476694 569.293922848419 63.295 0.84263 63.295 62.975 63.818 0 351 71 7 0 0 0 5.246E-11 2 37067 117 117 1 0.80908 0.9325 0 72741000 37811000 34929000 19727 908 7451 7622 30890;30891 30890 LAQQVCHAIANISDR 15 0 1 Unmodified _LAQQVCHAIANISDR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.6284 3 565.958022 1694.85224 78533.05 0.63503 0.0003594 0.93882 0.00053133 1.5738 0.00089073 565.958047460129 569.29518207253 75.018 0.77163 75.018 74.776 75.547 0 355 55 10 0 0 0 1.9675E-08 2 39814 100.41 81.166 1 1.2813 1.0891 0 34237000 13516000 20721000 19728 908 7451 7622 30892;30893 30893 LAQQVCHAIANISDR 15 0 1 Unmodified _LAQQVCHAIANISDR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 853.4384 2 848.433395 1694.85224 NaN NaN NaN 1.4506 0.0012308 NaN NaN NaN NaN 75.002 0.63082 75.002 74.815 75.445 0 0 0 0 0.0042605 1 39931 58.098 41.073 1 NaN NaN 0 3606300 0 3606300 19729 908 7451 7622 30894 30894 LAQQVCHAIANISDR 15 0 1 Unmodified _LAQQVCHAIANISDR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.2944 3 565.958022 1694.85224 79158.2 0.40332 0.00022826 0.2274 0.0001287 0.63072 0.00035696 565.958097033062 569.294256727915 75.161 0.88077 75.161 74.857 75.738 7.6294E-06 312 63 11 0 0 0 0.00010486 2 39060 46.319 38.142 1 1.4029 1.2238 0 26091000 11242000 14849000 19730 908 7451 7622 30895;30896 30896 LAQQVCHAIANISDR 15 0 1 Unmodified _LAQQVCHAIANISDR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.9356 2 848.433395 1694.85224 65481.08 0.51373 0.00043586 -0.096331 -8.1731E-05 0.4174 0.00035413 848.433383975289 853.437612567269 75.165 0.42933 75.165 74.935 75.364 7.6294E-06 148 29 8 0 0 0 0.00073509 1 39062 51.135 51.135 1 1.4882 1.2397 0 6300600 2471000 3829500 19731 908 7451 7622 30897 30897 LASAAYPDPSK 11 1 0 Unmodified _LASAAYPDPSK_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.2957 2 560.287671 1118.56079 NaN NaN NaN 2.9534 0.0016547 NaN NaN NaN NaN 34.248 0.33718 34.248 34.132 34.469 0 0 0 0 4.4109E-05 1 17317 99.973 44.424 1 NaN NaN 0 14735000 0 14735000 19732 567 7452 7623 30898 30898 LASAFTEEQAVLYNQR 16 0 1 Unmodified _LASAFTEEQAVLYNQR_ 0 0 0 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 920.4697 2 920.465415 1838.91628 NaN NaN NaN -0.33179 -0.0003054 NaN NaN NaN NaN 89.991 0.25537 89.991 89.858 90.114 0 0 0 0 9.6482E-13 2 54287 113.22 91.178 1 NaN NaN 0 7694200 7694200 0 19733 2101 7453 7624 30899;30900 30899 LASAFTEEQAVLYNQR 16 0 1 Unmodified _LASAFTEEQAVLYNQR_ 0 0 0 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.4692 2 920.465415 1838.91628 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.995 1 88.995 88.495 89.495 -7.6294E-06 0 0 0 2.0221E-07 1 54907 100.55 78.681 1 19734 2101 7453 7624 30901 30901 LASAFTEEQAVLYNQR 16 0 1 Unmodified _LASAFTEEQAVLYNQR_ 0 0 0 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 920.4671 2 920.465415 1838.91628 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.996 1 88.996 88.496 89.496 0 0 0 0 0.0006373 1 54908 75.819 58.877 1 19735 2101 7453 7624 30902 30902 LASAFTEEQAVLYNQR 16 0 1 Unmodified _LASAFTEEQAVLYNQR_ 0 0 0 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 925.9734 2 920.465415 1838.91628 64103.18 0.54488 0.00050154 0.42966 0.00039549 0.97454 0.00089703 920.46587715233 925.469660250586 103.4 0.49715 103.4 103.13 103.63 0 120 30 6 0 0 0 0.000193 1 58710 77.593 77.593 1 1.3479 1.1417 0 5014000 2517000 2497000 19736 2101 7453 7624 30903 30903 LASAFTEEQAVLYNQR 16 0 1 Unmodified _LASAFTEEQAVLYNQR_ 0 0 0 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 920.9679 2 920.465415 1838.91628 63329.51 0.22823 0.00021008 0.21531 0.00019818 0.44354 0.00040826 920.967114737586 925.469663502142 103.29 0.4952 103.29 103.03 103.53 0 134 34 6 0 0 0 0.0016452 2 57751 44.299 42.809 1 1.4287 1.2214 0 3264000 1329300 1934700 19737 2101 7453 7624 30904;30905 30904 LASAGVDTNVR 11 0 1 Unmodified _LASAGVDTNVR_ 0 0 0 B2R7X3;Q13112 B2R7X3 B2R7X3 CHAF1B Chromatin assembly factor 1 subunit B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.7999 2 551.796195 1101.57784 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.912 1 32.912 32.412 33.412 0 0 0 0 0.00038172 1 16413 77.379 25.934 1 19738 856 7454 7625 30906 30906 LASAQEVAGSTSAK 14 1 0 Unmodified _LASAQEVAGSTSAK_ 0 0 0 Q8IYL3 Q8IYL3 Q8IYL3 C1orf174 UPF0688 protein C1orf174 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.3427 2 660.343706 1318.67286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.673 1 27.673 27.173 28.173 -1.9073E-06 0 0 0 0.0054583 1 12837 55.353 28.238 1 19739 1900 7455 7626 30907 30907 LASDESLWQTLDLTGK 16 1 0 Unmodified _LASDESLWQTLDLTGK_ 0 0 0 D6R9R7;B4DHK6;A0A024R069;A0A0A0MTL5;Q13309 D6R9R7 D6R9R7 SKP2 S-phase kinase-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.9534 2 888.954349 1775.89414 64762.77 0.62507 0.00055566 0.063629 5.6564E-05 0.6887 0.00061222 889.455983800505 892.961304764924 118.15 0.33754 118.15 118.05 118.39 0 44 20 4 0 0 0 0.00013565 3 77668 76.522 76.522 1 1.085 1.0946 0 7862000 3342300 4519700 19740 38 7456 7627 30908;30909;30910 30908 LASDLLEWIR 10 0 1 Unmodified _LASDLLEWIR_ 0 0 0 A0A0S2Z3G9;O43707;Q96BG6;B4DSX0;K7EJH8;Q86TX4;A0A024R694;P12814;G3V2W4;H9KV75;B7Z565 A0A0S2Z3G9 A0A0S2Z3G9 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.3453 2 608.340238 1214.66592 NaN NaN NaN -0.21752 -0.00013233 NaN NaN NaN NaN 133.97 0.29323 133.97 133.81 134.1 0 0 0 0 0.023588 1 81648 53.683 23.113 1 NaN NaN 0 687860 0 687860 19741 548 7457 7628 30911 30911 LASDNVSIDQFLR 13 0 1 Unmodified _LASDNVSIDQFLR_ 0 0 0 A8K124;B4DHL1;A0A024R5W1;Q6N043 A8K124 A8K124 SUHW4;ZNF280D Zinc finger protein 280D ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.391 2 739.385905 1476.75726 NaN NaN NaN 0.20081 0.00014848 NaN NaN NaN NaN 118.22 0.3582 118.22 118.02 118.38 0 0 0 0 0.003824 1 69778 63.727 28.503 1 NaN NaN 0 1834900 0 1834900 19742 189 7458 7629 30912 30912 LASDNVSIDQFLR 13 0 1 Unmodified _LASDNVSIDQFLR_ 0 0 0 A8K124;B4DHL1;A0A024R5W1;Q6N043 A8K124 A8K124 SUHW4;ZNF280D Zinc finger protein 280D ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.3902 2 739.385905 1476.75726 NaN NaN NaN 0.28169 0.00020828 NaN NaN NaN NaN 118.06 0.40644 118.06 117.82 118.23 0 0 0 0 0.026528 1 68682 44.543 18.424 1 NaN NaN 0 2250800 0 2250800 19743 189 7458 7629 30913 30913 LASEEPPDDEEALATIR 17 0 1 Unmodified _LASEEPPDDEEALATIR_ 0 0 0 Q9UBB4;B1AHE4 Q9UBB4 Q9UBB4 ATXN10 Ataxin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.4511 2 928.449627 1854.8847 63718.51 0.37726 0.00035026 0.36587 0.00033969 0.74313 0.00068996 928.951154947055 933.955320965844 82.148 0.46619 82.148 81.888 82.355 0 114 41 4 0 0 0 0.014886 1 50233 28.624 28.624 1 1.1342 1.1212 0 15179000 7165300 8013300 19744 2095 7459 7630 30914 30914 LASFFLSR 8 0 1 Unmodified _LASFFLSR_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8;E7EV54;B4DEX7;I3L445;I3L4P1 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.7658 2 470.766178 939.517802 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.991 1 88.991 88.491 89.491 0 0 0 0 0.0046737 1 54903 101.41 66.604 1 19745 746 7460 7631 30915 30915 LASGVEGSDIPDDGK 15 1 0 Unmodified _LASGVEGSDIPDDGK_ 0 0 0 A0A024R2M7;O95747 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.3546 2 730.349185 1458.68382 72994.36 0.56297 0.00041116 0.36222 0.00026454 0.92518 0.00067571 730.85074399975 734.356587762562 46.084 0.46651 46.084 45.949 46.415 0 159 42 5 0 0 0 1.4539E-07 2 24903 109.72 109.72 1 1.5833 1.561 0 24702000 8510900 16191000 19746 117 7461 7632 30916;30917 30917 LASGVEGSDIPDDGK 15 1 0 Unmodified _LASGVEGSDIPDDGK_ 0 0 0 A0A024R2M7;O95747 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 734.3568 2 730.349185 1458.68382 70751.79 0.64315 0.00046972 0.38989 0.00028475 1.033 0.00075448 730.349372520272 734.356410469431 53.596 0.54591 53.596 53.344 53.89 0 108 38 4 0 0 0 0.018739 1 26687 31.722 31.722 1 2.1353 1.8062 0 2060200 810400 1249800 19747 117 7461 7632 30918 30918 LASGVEGSDIPDDGK 15 1 0 Unmodified _LASGVEGSDIPDDGK_ 0 0 0 A0A024R2M7;O95747 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.3564 2 730.349185 1458.68382 74396.52 0.498 0.00036371 -0.028655 -2.0928E-05 0.46934 0.00034278 730.349185521443 734.356248672042 54.223 0.61567 54.223 53.934 54.549 3.8147E-06 137 45 5 0 0 0 0.0039865 1 26381 40.516 40.516 1 1.9832 1.6443 0 1766200 755940 1010300 19748 117 7461 7632 30919 30919 LASIVEQVSVLQNQGR 16 0 1 Unmodified _LASIVEQVSVLQNQGR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 875.9871 2 870.983775 1739.953 65395.71 0.64224 0.00055938 0.44489 0.0003875 1.0871 0.00094688 870.984950042084 875.988059379154 101.53 0.66656 101.53 101.23 101.89 0 263 50 7 0 0 0 6.0714E-09 1 62248 109.24 109.24 1 2.0018 2.1536 0 47394000 15621000 31773000 19749 1611 7462 7633 30920 30920 LASIVEQVSVLQNQGR 16 0 1 Unmodified _LASIVEQVSVLQNQGR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 876.4898 2 870.983775 1739.953 64997.31 0.45805 0.00039895 0.30432 0.00026506 0.76237 0.00066401 871.485759203972 875.988052738719 100.86 0.68555 100.86 100.57 101.25 0 279 53 8 0 0 0 8.1849E-05 1 63215 80.979 80.979 1 1.968 2.2532 0 50924000 18304000 32620000 19750 1611 7462 7633 30921 30921 LASIVEQVSVLQNQGR 16 0 1 Unmodified _LASIVEQVSVLQNQGR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 875.9891 2 870.983775 1739.953 65953.42 0.97963 0.00085324 0.085791 7.4723E-05 1.0654 0.00092796 870.984021668933 875.987914831263 113.91 0.52207 113.91 113.66 114.18 0 121 23 8 0 0 0 0.00015153 1 66352 62.14 47.45 1 1.8392 1.5381 0 10317000 4450000 5866700 19751 1611 7462 7633 30922 30922 LASIVEQVSVLQNQGR 16 0 1 Unmodified _LASIVEQVSVLQNQGR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 875.9886 2 870.983775 1739.953 65259.43 0.38432 0.00033473 0.12083 0.00010524 0.50515 0.00043997 870.983883524377 875.98812382629 113.76 0.53429 113.76 113.52 114.05 7.6294E-06 141 25 8 0 0 0 0.0001657 1 65334 61.48 61.48 1 1.7822 1.4795 0 7710100 2649900 5060100 19752 1611 7462 7633 30923 30923 LASLFSSLEPQIQPVYVPVPK 21 1 0 Unmodified _LASLFSSLEPQIQPVYVPVPK_ 0 0 0 P42696;A2A2V2;Q5TCT4;H7C5M1 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1161.1571 2 1156.64866 2311.28277 57834.9 0.18955 0.00021925 0.30915 0.00035758 0.49871 0.00057683 1157.15043278263 1161.1574545181 132.84 0.46796 132.84 132.6 133.07 0 161 23 10 0 0 0 0.0039943 2 86770 28.976 28.976 1 0.97548 1.0173 0 29832000 14767000 15065000 19753 1566 7463 7634 30924;30925 30925 LASLFSSLEPQIQPVYVPVPK 21 1 0 Unmodified _LASLFSSLEPQIQPVYVPVPK_ 0 0 0 P42696;A2A2V2;Q5TCT4;H7C5M1 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1160.656 2 1156.64866 2311.28277 57303.22 0.39608 0.00045813 0.06825 7.8941E-05 0.46433 0.00053707 1157.15018013494 1161.15729400831 132.44 0.47136 132.44 132.21 132.68 -1.5259E-05 191 26 10 0 0 0 5.0577E-06 2 88601 49.12 49.12 1 1.0191 1.1227 0 43206000 20553000 22653000 19754 1566 7463 7634 30926;30927 30926 LASLGLK 7 1 0 Unmodified _LASLGLK_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 355.2384 2 351.231439 700.448326 102510.2 -0.043289 -1.5204E-05 0.0031168 1.0947E-06 -0.040172 -1.411E-05 351.231344947604 355.238446971936 50.42 0.60033 50.42 50.068 50.668 0 182 58 5 0 0 0 0.017423 2 27688 97.071 0 1 1.9453 2.0945 0 38198000 13209000 24990000 19755 1972 7464 7635 30928;30929 30928 LASLGLK 7 1 0 Unmodified _LASLGLK_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 355.2385 2 351.231439 700.448326 101785.8 0.10966 3.8516E-05 0.1545 5.4267E-05 0.26416 9.2782E-05 351.23143617249 355.238475620465 49.118 0.72442 49.118 48.877 49.601 0 222 60 5 0 0 0 0.014014 2 27524 101.21 0 1 2.0503 2.2908 0 90936000 29662000 61275000 19756 1972 7464 7635 30930;30931 30930 LASLNAEALNNLLLER 16 0 1 Unmodified _LASLNAEALNNLLLER_ 0 0 0 A0A024R9K2;Q8TBE0 A0A024R9K2 A0A024R9K2 BAHD1 Bromo adjacent homology domain-containing 1 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883 2 877.493975 1752.9734 68179.84 0.56817 0.00049857 0.16009 0.00014048 0.72827 0.00063905 877.997385830256 882.498585507972 120.99 0.23584 120.99 120.85 121.09 0 44 13 5 0 0 0 0.00038789 1 80070 51.135 37.95 1 1.5305 1.5444 0 5918500 2315700 3602800 19757 281 7465 7636 30932 30932 LASQLTESSQTSISLESDLK 20 1 0 Unmodified _LASQLTESSQTSISLESDLK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1073.0531 2 1069.04716 2136.07977 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.374 1 94.374 93.874 94.874 0 0 0 0 0.0042975 1 57325 48.823 41.278 1 19758 1795 7466 7637 30933 30933 LASSDDFISQNVIPLEAYR 19 0 1 Unmodified _LASSDDFISQNVIPLEAYR_ 0 0 0 A7E234;Q9H582;Q9NVH8;Q9H8J8;Q8NEI6 A7E234 A7E234 ZNF644 Zinc finger protein 644 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1069.5399 2 1069.54185 2137.06915 58012.21 0.55989 0.00059883 0.025352 2.7115E-05 0.58525 0.00062595 1070.04218825323 1074.54628064729 117.93 0.21848 117.93 117.83 118.05 0 49 15 6 0 0 0 0.010087 1 77432 26.124 26.124 1 0.45905 0.45636 0 8447800 5178100 3269600 19759 693 7467 7638 30934 30934 LASSVLR 7 0 1 Unmodified _LASSVLR_ 0 0 0 J3QR09;J3KTE4;Q53G49;P84098;J3QL15 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 373.2318 2 373.231971 744.449388 98350.88 0.56677 0.00021154 0.14215 5.3054E-05 0.70891 0.00026459 373.231901521576 378.236019796828 33.424 1.1514 33.424 32.986 34.138 0 462 112 7 0 0 0 0.022316 2 16581 92.191 29.212 1 0.84958 1.0046 0 270290000 157890000 112400000 19760 1331 7468 7639 30935;30936 30936 LASSVLR 7 0 1 Unmodified _LASSVLR_ 0 0 0 J3QR09;J3KTE4;Q53G49;P84098;J3QL15 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 378.2359 2 373.231971 744.449388 98225.34 0.059903 2.2358E-05 0.21421 7.9951E-05 0.27412 0.00010231 373.231973265568 378.23606668606 32.781 1.5492 32.781 32.246 33.796 0 488 138 6 0 0 0 0.029075 2 16239 70.912 16.624 1 0.84126 0.97413 0 281510000 157810000 123700000 19761 1331 7468 7639 30937;30938 30937 LASTIADNQEQDLEK 15 1 0 Unmodified _LASTIADNQEQDLEK_ 0 0 0 A8K8N3;Q96R06;K7ELC8;E9PMD0 A8K8N3 A8K8N3 SPAG5 Sperm-associated antigen 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.913 2 837.912681 1673.81081 68111.15 0.73937 0.00061953 -0.57529 -0.00048204 0.16408 0.00013749 837.911841750161 841.919779550181 51.311 0.33041 51.311 51.181 51.511 0 74 31 4 0 0 0 4.5138E-07 1 28377 103.46 84.33 1 0.75751 0.78761 0 14880000 8232700 6647200 19762 779 7469 7640 30939 30939 LASTIADNQEQDLEK 15 1 0 Unmodified _LASTIADNQEQDLEK_ 0 0 0 A8K8N3;Q96R06;K7ELC8;E9PMD0 A8K8N3 A8K8N3 SPAG5 Sperm-associated antigen 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.9125 2 837.912681 1673.81081 67538.13 0.7002 0.00058671 -0.20929 -0.00017537 0.49091 0.00041134 837.912334489949 841.919671549818 50.078 0.30204 50.078 49.926 50.228 0 76 25 4 0 0 0 0.00019854 1 28179 76.522 59.58 1 0.63944 0.64967 0 12716000 9411800 3303900 19763 779 7469 7640 30940 30940 LASTNSSVLGADLPSSMK 18 1 0 Oxidation (M) _LASTNSSVLGADLPSSM(ox)K_ LASTNSSVLGADLPSSM(1)K LASTNSSVLGADLPSSM(111.95)K 0 1 0 E7ETY2;H0YA99;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.9536 2 897.451116 1792.88768 65641.66 0.34831 0.00031259 0.46337 0.00041586 0.81168 0.00072844 897.452587050781 901.458303119293 74.622 0.55666 74.622 74.312 74.869 7.6294E-06 248 45 7 0 0 0 4.6856E-13 2 43745 111.95 111.95 1 1.1181 1.2052 0 33960000 16025000 17936000 19764 1712;1225 7470 7641 30941;30942 30942 935 LASTNSSVLGADLPSSMK 18 1 0 Oxidation (M) _LASTNSSVLGADLPSSM(ox)K_ LASTNSSVLGADLPSSM(1)K LASTNSSVLGADLPSSM(121.18)K 0 1 0 E7ETY2;H0YA99;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.9619 2 897.451116 1792.88768 65343.16 0.34916 0.00031335 0.2724 0.00024447 0.62156 0.00055782 897.451739764384 901.458279115413 73.503 0.57701 73.503 73.262 73.839 0 285 48 8 0 0 0 4.9348E-17 2 44080 121.18 121.18 1 0.97582 1.0662 0 40382000 19306000 21076000 19765 1712;1225 7470 7641 30943;30944 30944 935 LASTNSSVLGADLPSSMK 18 1 0 Oxidation (M) _LASTNSSVLGADLPSSM(ox)K_ LASTNSSVLGADLPSSM(1)K LASTNSSVLGADLPSSM(54.6)K 0 1 0 E7ETY2;H0YA99;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.9606 2 897.451116 1792.88768 65398.48 0.38153 0.0003424 0.41346 0.00037106 0.79498 0.00071346 897.953184555381 901.458596881932 85.271 0.57072 85.271 85.027 85.598 -7.6294E-06 213 36 8 0 0 0 2.9718E-05 1 46594 54.598 54.598 1 1.4425 1.1516 0 6927000 2922800 4004200 19766 1712;1225 7470 7641 30945 30945 935 LASTNSSVLGADLPSSMK 18 1 0 Unmodified _LASTNSSVLGADLPSSMK_ 0 0 0 E7ETY2;H0YA99;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 893.4613 2 889.453659 1776.89276 66334.28 0.073122 6.5039E-05 1.157 0.0010291 1.2301 0.0010941 889.955731531803 893.963429897236 102.69 0.4814 102.69 102.49 102.97 0 86 30 5 0 0 0 0.0093234 1 57439 29.912 29.912 1 1.2646 1.0259 0 2818200 1482900 1335300 19767 1712;1225 7470 7642 30946 30946 LASTPFK 7 1 0 Unmodified _LASTPFK_ 0 0 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 382.2215 2 382.221072 762.42759 99865.52 0.4667 0.00017838 0.013436 5.1357E-06 0.48013 0.00018352 382.220950408737 386.228015730791 36.367 0.5686 36.367 36.102 36.671 0 135 47 4 0 0 0 0.037563 1 18609 60.788 23.759 1 1.5114 1.6402 0 22250000 8986200 13264000 19768 1562 7471 7643 30947 30947 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK 33 1 0 Unmodified _LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK_ 0 0 0 A0A024RCA7;P05387;H0YDD8 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.8162 3 925.482155 2773.42464 64094.77 1.0824 0.0010018 -0.24353 -0.00022538 0.8389 0.00077638 925.816155830716 928.487744333205 84.322 0.40255 84.322 84.134 84.537 0 146 30 7 0 0 0 0.028734 2 50617 11.344 11.344 1 0.7534 0.83388 0 57971000 31890000 26081000 19769 356 7472 7644 30948;30949 30949 LASYLDK 7 1 0 Unmodified _LASYLDK_ 0 0 0 CON__P05784;B4DJM5;CON__Q99456;Q99456;CON__P02533;P02533;CON__A2A4G1;CON__Q04695;Q04695;K7EPJ9;B4E2P9;CON__P08779;P08779;B4DWU0;B4E2J5;CON__P13645;P13645;CON__P35527;P35527 CON__P05784;CON__P02533;CON__Q04695;CON__P08779;CON__P13645;CON__P35527 CON__P13645 KRT12;KRT14;KRT17;KRT16;KRT10;KRT9 Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.2234 2 405.223811 808.433069 NaN NaN NaN -0.10397 -4.2131E-05 NaN NaN NaN NaN 35.1 1.4904 35.1 34.349 35.839 0 0 0 0 0.030367 2 17783 85.265 8.0509 1 NaN NaN 0 445490000 445490000 0 + 19770 1161;1165;1150;1159;1168;1155 7473 7645 30950;30951 30951 LASYLDK 7 1 0 Unmodified _LASYLDK_ 0 0 0 CON__P05784;B4DJM5;CON__Q99456;Q99456;CON__P02533;P02533;CON__A2A4G1;CON__Q04695;Q04695;K7EPJ9;B4E2P9;CON__P08779;P08779;B4DWU0;B4E2J5;CON__P13645;P13645;CON__P35527;P35527 CON__P05784;CON__P02533;CON__Q04695;CON__P08779;CON__P13645;CON__P35527 CON__P13645 KRT12;KRT14;KRT17;KRT16;KRT10;KRT9 Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 405.2239 2 405.223811 808.433069 NaN NaN NaN -0.17105 -6.9313E-05 NaN NaN NaN NaN 34.388 1.408 34.388 33.58 34.988 0 0 0 0 0.032752 1 17151 77.741 6.026 1 NaN NaN 0 790370000 790370000 0 + 19771 1161;1165;1150;1159;1168;1155 7473 7645 30952 30952 LASYLDK 7 1 0 Unmodified _LASYLDK_ 0 0 0 CON__P05784;B4DJM5;CON__Q99456;Q99456;CON__P02533;P02533;CON__A2A4G1;CON__Q04695;Q04695;K7EPJ9;B4E2P9;CON__P08779;P08779;B4DWU0;B4E2J5;CON__P13645;P13645;CON__P35527;P35527 CON__P05784;CON__P02533;CON__Q04695;CON__P08779;CON__P13645;CON__P35527 CON__P13645 KRT12;KRT14;KRT17;KRT16;KRT10;KRT9 Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 405.2237 2 405.223811 808.433069 NaN NaN NaN -0.005805 -2.3523E-06 NaN NaN NaN NaN 39.731 1.5297 39.731 39.151 40.681 0 0 0 0 0.045068 1 18002 60.76 7.2056 1 NaN NaN 0 90799000 90799000 0 + 19772 1161;1165;1150;1159;1168;1155 7473 7645 30953 30953 LASYLDK 7 1 0 Unmodified _LASYLDK_ 0 0 0 CON__P05784;B4DJM5;CON__Q99456;Q99456;CON__P02533;P02533;CON__A2A4G1;CON__Q04695;Q04695;K7EPJ9;B4E2P9;CON__P08779;P08779;B4DWU0;B4E2J5;CON__P13645;P13645;CON__P35527;P35527 CON__P05784;CON__P02533;CON__Q04695;CON__P08779;CON__P13645;CON__P35527 CON__P13645 KRT12;KRT14;KRT17;KRT16;KRT10;KRT9 Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 405.2239 2 405.223811 808.433069 NaN NaN NaN 0.097154 3.9369E-05 NaN NaN NaN NaN 39.692 1.6784 39.692 39.101 40.779 0 0 0 0 0.03697 1 17515 64.757 6.5901 1 NaN NaN 0 76653000 76653000 0 + 19773 1161;1165;1150;1159;1168;1155 7473 7645 30954 30954 LASYLDR 7 0 1 Unmodified _LASYLDR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.2271 2 419.226885 836.439217 92399.02 0.45552 0.00019096 -0.25606 -0.00010735 0.19946 8.3617E-05 419.226857378349 424.230848466408 38.771 1.2791 38.771 38.358 39.637 0 544 104 11 0 0 0 0.017985 2 19875 96.51 64.397 1 1.0784 1.2782 0 522710000 246540000 276170000 19774 316 7474 7646 30955;30956 30956 LASYLDR 7 0 1 Unmodified _LASYLDR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 419.2266 2 419.226885 836.439217 92410.71 -0.020115 -8.4328E-06 -0.23659 -9.9186E-05 -0.25671 -0.00010762 419.226809368234 424.230892867601 37.881 1.0187 37.881 37.414 38.433 3.8147E-06 443 80 11 0 0 0 0.03394 1 19660 63.148 39.175 1 1.0677 1.256 0 991900000 471840000 520050000 19775 316 7474 7646 30957 30957 LASYLDR 7 0 1 Unmodified _LASYLDR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 424.2307 2 419.226885 836.439217 NaN NaN NaN 0.25598 0.00010731 NaN NaN NaN NaN 43.843 1.0619 43.843 43.497 44.558 0 0 0 0 0.052326 1 20673 57.177 10.826 1 NaN NaN 0 17456000 0 17456000 19776 316 7474 7646 30958 30958 LATAQFK 7 1 0 Unmodified _LATAQFK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.7333 2 389.726521 777.438489 101451.5 0.40859 0.00015924 -0.23403 -9.1209E-05 0.17455 6.8028E-05 389.726458156777 393.73339477399 29.424 0.38641 29.424 29.205 29.591 0 89 31 4 0 0 0 0.031504 1 14167 67.035 33.296 1 0.76667 0.78584 0 17624000 9469500 8154600 19777 264 7475 7647 30959 30959 LATAQFK 7 1 0 Unmodified _LATAQFK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 389.7264 2 389.726521 777.438489 98127.62 0.032341 1.2604E-05 0.19411 7.5652E-05 0.22646 8.8256E-05 389.726439527322 393.733559694017 33.737 0.25761 33.737 33.604 33.861 0 62 19 5 0 0 0 0.038498 1 14350 60.358 23.33 1 1.0588 0.86299 0 4620800 2355000 2265800 19778 264 7475 7647 30960 30960 LATELYHQK 9 1 0 Unmodified _LATELYHQK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.8054 2 551.798206 1101.58186 85811.37 0.50089 0.00027639 -0.24695 -0.00013626 0.25394 0.00014012 551.797733168351 555.805177851189 31.376 0.26778 31.376 31.235 31.503 3.8147E-06 44 13 6 0 0 0 0.056712 1 12772 36.395 36.395 1 1.6472 1.4561 0 885670 365750 519920 19779 1688 7476 7648 30961 30961 LATLLGLQAPPTR 13 0 1 Unmodified _LATLLGLQAPPTR_ 0 0 0 Q05BS0;Q6P1R0;Q3B770;Q7Z5T5;Q24JU4;J9R021;Q14152 Q05BS0 Q05BS0 EIF3A;eIF3a Eukaryotic translation initiation factor 3 subunit A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.9127 2 675.908819 1349.80309 NaN NaN NaN 0.093563 6.324E-05 NaN NaN NaN NaN 101.61 0.27917 101.61 101.55 101.83 0 0 0 0 0.022198 1 62509 46.796 36.843 1 NaN NaN 0 2022300 0 2022300 19780 1340 7477 7649 30962 30962 LATLLGLQAPPTR 13 0 1 Unmodified _LATLLGLQAPPTR_ 0 0 0 Q05BS0;Q6P1R0;Q3B770;Q7Z5T5;Q24JU4;J9R021;Q14152 Q05BS0 Q05BS0 EIF3A;eIF3a Eukaryotic translation initiation factor 3 subunit A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.4138 2 675.908819 1349.80309 NaN NaN NaN -0.37952 -0.00025652 NaN NaN NaN NaN 100.8 0.51081 100.8 100.58 101.09 0 0 0 0 0.0079804 1 63286 54.198 39.26 1 NaN NaN 0 4335200 0 4335200 19781 1340 7477 7649 30963 30963 LATNAAVTVLR 11 0 1 Unmodified _LATNAAVTVLR_ 0 0 0 Q7Z759;Q53HU0;P50990;H7C2U0 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.8443 2 564.840405 1127.66626 80073.2 0.64839 0.00036624 0.81469 0.00046017 1.4631 0.0008264 564.840512307837 569.844838777435 69.139 0.39265 69.139 68.958 69.351 0 140 32 7 0 0 0 0.0064035 1 41057 54.471 31.731 1 3.1647 3.6031 0 49382000 10449000 38933000 19782 1592 7478 7650 30964 30964 LATNTSAPDLK 11 1 0 Unmodified _LATNTSAPDLK_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;B4DSQ1;H7C4C5;Q8NDS5;B5MEG9 H0Y2V1 H0Y2V1 MAP4;DKFZp547H1810 Microtubule-associated protein;Microtubule-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.8132 2 565.806228 1129.5979 82630.41 0.90716 0.00051328 -0.19065 -0.00010787 0.71651 0.00040541 565.806288635557 569.813072599772 38.838 0.37254 38.838 38.65 39.023 0 101 30 5 0 0 0 2.8875E-05 1 19998 101.46 65.842 1 1.0518 1.0781 0 17625000 8270000 9355000 19783 123 7479 7651 30965 30965 LATNTSAPDLK 11 1 0 Unmodified _LATNTSAPDLK_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;B4DSQ1;H7C4C5;Q8NDS5;B5MEG9 H0Y2V1 H0Y2V1 MAP4;DKFZp547H1810 Microtubule-associated protein;Microtubule-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.8131 2 565.806228 1129.5979 83002.14 0.49052 0.00027754 -0.23534 -0.00013316 0.25518 0.00014438 565.806447601399 569.81310811363 37.916 0.37408 37.916 37.671 38.045 0 88 21 6 0 0 0 2.8875E-05 1 19769 101.46 65.842 1 1.1543 1.1966 0 33332000 15321000 18011000 19784 123 7479 7651 30966 30966 LATNTSAPDLK 11 1 0 Unmodified _LATNTSAPDLK_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;B4DSQ1;H7C4C5;Q8NDS5;B5MEG9 H0Y2V1 H0Y2V1 MAP4;DKFZp547H1810 Microtubule-associated protein;Microtubule-associated protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.8137 2 565.806228 1129.5979 80959.03 0.59108 0.00033444 -0.49473 -0.00027992 0.096352 5.4517E-05 565.806143119798 569.81285781913 44.36 0.35596 44.36 44.17 44.526 0 76 21 5 0 0 0 0.0074524 1 21094 52.579 52.579 1 1.1086 0.93911 0 1464800 700700 764050 19785 123 7479 7651 30967 30967 LATNTSAPDLK 11 1 0 Unmodified _LATNTSAPDLK_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;B4DSQ1;H7C4C5;Q8NDS5;B5MEG9 H0Y2V1 H0Y2V1 MAP4;DKFZp547H1810 Microtubule-associated protein;Microtubule-associated protein 4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.8132 2 565.806228 1129.5979 NaN NaN NaN -1.0445 -0.00059101 NaN NaN NaN NaN 44.531 0.33967 44.531 44.324 44.664 0 0 0 0 0.037069 1 20650 48.091 25.351 1 NaN NaN 0 726580 0 726580 19786 123 7479 7651 30968 30968 LATQLTGPVMPVR 13 0 1 Oxidation (M) _LATQLTGPVM(ox)PVR_ LATQLTGPVM(1)PVR LATQLTGPVM(90.15)PVR 0 1 0 Q6NZ55;A8K4C8;P26373;O60250 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.8961 2 699.892312 1397.77007 70959.62 0.48081 0.00033651 -0.0074008 -5.1797E-06 0.47341 0.00033133 699.892492262494 704.896547668415 72.594 1.056 72.594 72.244 73.3 0 567 83 11 0 0 0 6.2613E-05 2 42898 90.149 90.149 1 1.282 1.5223 0 865010000 375140000 489870000 19787 733 7480 7652 30969;30970 30970 570 LATQLTGPVMPVR 13 0 1 Oxidation (M) _LATQLTGPVM(ox)PVR_ LATQLTGPVM(1)PVR LATQLTGPVM(170.89)PVR 0 1 0 Q6NZ55;A8K4C8;P26373;O60250 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.8923 2 699.892312 1397.77007 70852.72 0.41984 0.00029384 -0.085784 -6.004E-05 0.33406 0.0002338 699.892384782906 704.896504472129 71.387 1.1162 71.387 71.054 72.17 0 606 88 11 0 0 0 9.9148E-31 4 42677 170.89 170.89 1 1.2564 1.4736 0 780940000 324750000 456190000 19788 733 7480 7652 30971;30972;30973;30974 30972 570 LATQLTGPVMPVR 13 0 1 Oxidation (M) _LATQLTGPVM(ox)PVR_ LATQLTGPVM(1)PVR LATQLTGPVM(92.61)PVR 0 1 0 Q6NZ55;A8K4C8;P26373;O60250 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.897 2 699.892312 1397.77007 71951.63 0.49471 0.00034624 0.041383 2.8963E-05 0.53609 0.00037521 699.892508015535 704.896521622856 83.019 1.1064 83.019 82.408 83.515 0 425 67 11 0 0 0 4.8259E-05 2 45038 92.611 84.817 1 0.53199 0.45897 0 79122000 52862000 26259000 19789 733 7480 7652 30975;30976 30975 570 LATQLTGPVMPVR 13 0 1 Oxidation (M) _LATQLTGPVM(ox)PVR_ LATQLTGPVM(1)PVR LATQLTGPVM(54.58)PVR 0 1 0 Q6NZ55;A8K4C8;P26373;O60250 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.8929 2 699.892312 1397.77007 72755.16 0.55741 0.00039013 0.15613 0.00010927 0.71354 0.0004994 699.892538310238 704.896438358979 102.39 0.58824 102.39 102.17 102.76 0 170 42 6 0 0 0 0.0010828 2 58038 54.584 54.584 1 0.87946 0.72318 0 11892000 6335000 5556800 19790 733 7480 7652 30977;30978 30978 570 LATQLTGPVMPVR 13 0 1 Oxidation (M) _LATQLTGPVM(ox)PVR_ LATQLTGPVM(1)PVR LATQLTGPVM(66.6)PVR 0 1 0 Q6NZ55;A8K4C8;P26373;O60250 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 699.8924 2 699.892312 1397.77007 70466.19 0.5456 0.00038186 -0.29048 -0.0002033 0.25512 0.00017855 699.892265000611 704.896362811346 83.099 1.0013 83.099 82.636 83.637 0 397 57 11 0 0 0 0.00013583 1 44293 66.595 66.595 1 0.52102 0.4547 0 74121000 49517000 24604000 19791 733 7480 7652 30979 30979 570 LATQLTGPVMPVR 13 0 1 Oxidation (M) _LATQLTGPVM(ox)PVR_ LATQLTGPVM(1)PVR LATQLTGPVM(48.98)PVR 0 1 0 Q6NZ55;A8K4C8;P26373;O60250 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.8968 2 699.892312 1397.77007 73191.54 0.42459 0.00029717 0.16693 0.00011684 0.59152 0.000414 699.892470792149 704.896483262836 102.16 0.50594 102.16 101.94 102.44 0 177 38 6 0 0 0 0.001924 1 57028 48.981 34.863 1 1.0112 0.82587 0 9297000 4823500 4473500 19792 733 7480 7652 30980 30980 570 LATQLTGPVMPVR 13 0 1 Unmodified _LATQLTGPVMPVR_ 0 0 0 Q6NZ55;A8K4C8;P26373;O60250 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.3966 2 691.894854 1381.77516 72007.66 0.4415 0.00030547 0.028416 1.9661E-05 0.46992 0.00032513 691.89484688866 696.899115799587 102.39 0.66331 102.39 102.16 102.82 0 239 47 8 0 0 0 0.00020824 1 58016 70.1 70.1 1 0.97929 0.82021 0 24996000 12976000 12020000 19793 733 7480 7653 30981 30981 LATQLTGPVMPVR 13 0 1 Unmodified _LATQLTGPVMPVR_ 0 0 0 Q6NZ55;A8K4C8;P26373;O60250 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.3966 2 691.894854 1381.77516 73071.13 0.39654 0.00027436 0.077355 5.3522E-05 0.47389 0.00032788 691.894935350987 696.899164097206 102.14 0.72772 102.14 101.92 102.65 -7.6294E-06 279 53 8 0 0 0 3.3797E-06 2 57013 108.43 108.43 1 0.95648 0.82514 0 22533000 11166000 11367000 19794 733 7480 7653 30982;30983 30983 LATQSNEITIPVTFESR 17 0 1 Unmodified _LATQSNEITIPVTFESR_ 0 0 0 V9HW43;P04792;B4DL87;C9J3N8 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 954.0001 2 953.499455 1904.98436 62524.67 0.72841 0.00069454 -0.1157 -0.00011032 0.61272 0.00058422 954.000800573884 958.503283928437 106.43 0.94623 106.43 106.09 107.04 0 539 69 12 0 0 0 3.4032E-05 1 65902 80.905 80.905 1 1.3343 1.5803 0 424130000 187320000 236810000 19795 1443 7481 7654 30984 30984 LATQSNEITIPVTFESR 17 0 1 Unmodified _LATQSNEITIPVTFESR_ 0 0 0 V9HW43;P04792;B4DL87;C9J3N8 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 953.4993 2 953.499455 1904.98436 62021.88 0.69731 0.00066489 0.066585 6.3489E-05 0.7639 0.00072838 954.000961993165 958.503508654589 105.83 0.93337 105.83 105.48 106.41 0 544 69 12 0 0 0 1.994E-68 2 67116 190.03 190.03 1 1.3313 1.5532 0 505730000 211550000 294190000 19796 1443 7481 7654 30985;30986 30986 LATQSNEITIPVTFESR 17 0 1 Unmodified _LATQSNEITIPVTFESR_ 0 0 0 V9HW43;P04792;B4DL87;C9J3N8 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 958.5042 2 953.499455 1904.98436 61927.57 0.6261 0.00059699 0.27076 0.00025817 0.89686 0.00085516 954.001104312977 958.503902320159 117.81 0.80232 117.81 117.55 118.36 -7.6294E-06 245 33 12 0 0 0 6.3234E-18 2 69405 128.68 118.07 1 1.1822 1.0215 0 102040000 47609000 54434000 19797 1443 7481 7654 30987;30988 30988 LATQSNEITIPVTFESR 17 0 1 Unmodified _LATQSNEITIPVTFESR_ 0 0 0 V9HW43;P04792;B4DL87;C9J3N8 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 953.4988 2 953.499455 1904.98436 62149.2 0.27086 0.00025827 0.49144 0.00046858 0.7623 0.00072685 954.001386439625 959.005395443002 117.66 0.90521 117.66 117.33 118.23 0 283 41 12 0 0 0 5.7746E-45 2 68345 165.54 165.54 1 1.159 1.0117 0 98059000 46012000 52047000 19798 1443 7481 7654 30989;30990 30989 LATVISVWNSDTQNPYHQQALAEK 24 1 0 Unmodified _LATVISVWNSDTQNPYHQQALAEK_ 0 0 0 Q9HBB9;Q8WUM5;Q9HC39;I3L2C7;P57678;I3L399 Q9HBB9 Q9HBB9 GEMIN4 Gem-associated protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 908.1325 3 905.124191 2712.35074 NaN NaN NaN -0.3968 -0.00035916 NaN NaN NaN NaN 95.348 0.27715 95.348 95.178 95.455 0 0 0 0 0.018177 1 59315 27.203 19.757 1 NaN NaN 0 7120300 0 7120300 19799 1940 7482 7655 30991 30991 LATVISVWNSDTQNPYHQQALAEK 24 1 0 Unmodified _LATVISVWNSDTQNPYHQQALAEK_ 0 0 0 Q9HBB9;Q8WUM5;Q9HC39;I3L2C7;P57678;I3L399 Q9HBB9 Q9HBB9 GEMIN4 Gem-associated protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 905.4588 3 905.124191 2712.35074 63577.84 0.38378 0.00034737 0.63956 0.00057888 1.0233 0.00092625 905.459294644782 908.130713697311 108.94 0.37436 108.94 108.73 109.1 0 73 17 7 0 0 0 0.038997 1 61749 12.196 12.196 1 0.8949 0.72528 0 2676000 1576600 1099400 19800 1940 7482 7655 30992 30992 LATVLSGACDGEVR 14 0 1 Unmodified _LATVLSGACDGEVR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.3647 2 724.364115 1446.71368 70715.26 0.71703 0.00051939 -0.23061 -0.00016705 0.48642 0.00035235 724.364070567107 729.36808957586 65.993 0.89707 65.993 65.53 66.427 0 373 81 6 0 0 0 6.2788E-06 3 37911 99.752 99.752 1 0.85123 0.87078 0 34634000 19655000 14979000 19801 402 7483 7656 30993;30994;30995 30994 LATVLSGACDGEVR 14 0 1 Unmodified _LATVLSGACDGEVR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.3689 2 724.364115 1446.71368 70790.29 0.47196 0.00034187 -0.07604 -5.5081E-05 0.39592 0.00028679 724.364079997461 729.368281169575 64.832 0.84024 64.832 64.459 65.3 0 318 71 6 0 0 0 7.6916E-10 2 38098 122.51 113.63 1 0.94549 1.0421 0 41265000 20945000 20320000 19802 402 7483 7656 30996;30997 30997 LATVLSGACDGEVR 14 0 1 Unmodified _LATVLSGACDGEVR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.369 2 724.364115 1446.71368 69200.82 0.68926 0.00049927 -0.41449 -0.00030024 0.27477 0.00019903 724.363909924841 729.368154782945 75.724 0.80074 75.724 75.264 76.065 0 301 55 9 0 0 0 2.2924E-05 2 40299 97.214 73.951 1 1.4222 1.1661 0 16861000 6884700 9976400 19803 402 7483 7656 30998;30999 30999 LATVLSGACDGEVR 14 0 1 Unmodified _LATVLSGACDGEVR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.3689 2 724.364115 1446.71368 69453.67 0.51105 0.00037019 -0.055755 -4.0387E-05 0.45529 0.0003298 724.364095783073 729.368390477811 76.094 0.77252 76.094 75.631 76.404 0 247 50 7 0 0 0 1.1627E-09 2 39700 121.08 85.132 1 1.3846 1.159 0 16493000 7186900 9306200 19804 402 7483 7656 31000;31001 31001 LATVVGENGSVLR 13 0 1 Unmodified _LATVVGENGSVLR_ 0 0 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.8769 2 657.872434 1313.73031 74514.93 0.77936 0.00051272 0.14458 9.5115E-05 0.92394 0.00060783 657.872752146076 662.876453485323 70.576 1.1702 70.576 70.176 71.347 0 595 97 8 0 0 0 7.2902E-09 5 40904 117.86 81.478 1 1.0199 1.1572 0 108590000 51027000 57561000 19805 2059 7484 7657 31002;31003;31004;31005;31006 31003 LATVVGENGSVLR 13 0 1 Unmodified _LATVVGENGSVLR_ 0 0 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.8769 2 657.872434 1313.73031 74930.23 0.5704 0.00037525 0.074132 4.877E-05 0.64453 0.00042402 657.872477964129 662.876508883329 69.419 1.2002 69.419 68.902 70.102 0 620 99 8 0 0 0 4.4222E-05 4 41594 97.214 72.187 1 0.99838 1.1412 0 89126000 43820000 45306000 19806 2059 7484 7657 31007;31008;31009;31010 31009 LATVVGENGSVLR 13 0 1 Unmodified _LATVVGENGSVLR_ 0 0 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.8767 2 657.872434 1313.73031 75118.53 0.54303 0.00035724 -0.03338 -2.196E-05 0.50965 0.00033528 657.872328166317 662.876508382086 80.763 1.209 80.763 80.382 81.591 0 440 80 8 0 0 0 0.0011123 2 43519 59.155 37.372 1 1.7604 1.4937 0 32945000 11228000 21717000 19807 2059 7484 7657 31011;31012 31011 LATVVGENGSVLR 13 0 1 Unmodified _LATVVGENGSVLR_ 0 0 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.877 2 657.872434 1313.73031 74993.48 0.68302 0.00044934 -0.098816 -6.5008E-05 0.58421 0.00038433 657.872315915305 662.876438267181 81.037 1.2943 81.037 80.61 81.905 0 423 79 9 0 0 0 0.0001391 2 42799 81.709 47.665 1 1.8044 1.574 0 26396000 10419000 15977000 19808 2059 7484 7657 31013;31014 31013 LATVVNDER 9 0 1 Unmodified _LATVVNDER_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7763 2 508.772188 1015.52982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.742 1 29.742 29.242 30.242 1.9073E-06 0 0 0 0.0030519 1 14455 76.827 29.76 1 19809 1838 7485 7658 31015 31015 LATVVNDER 9 0 1 Unmodified _LATVVNDER_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.7727 2 508.772188 1015.52982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.781 1 29.781 29.281 30.281 0 0 0 0 0.0038685 1 14480 69.598 38.369 1 19810 1838 7485 7658 31016 31016 LATVVNDER 9 0 1 Unmodified _LATVVNDER_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.7761 2 508.772188 1015.52982 91671.56 0.77165 0.00039259 1.7167 0.0008734 2.4883 0.001266 508.772630718635 513.77625700937 29.23 0.38792 29.23 28.993 29.381 0 62 26 5 0 0 0 0.0014132 1 14096 85.731 40.649 1 0.99698 0.97932 0 13644000 6840300 6803600 19811 1838 7485 7658 31017 31017 LATYGITVAELTGDHQLCK 19 1 0 Unmodified _LATYGITVAELTGDHQLCK_ 0 0 0 O75643;A4FU77;Q5ZF01 O75643 O75643 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.0316 3 697.35774 2089.05139 72935 0.80278 0.00055983 0.28909 0.0002016 1.0919 0.00076143 697.691955600936 700.363678706293 98.814 0.67665 98.814 98.543 99.219 0 307 55 8 0 0 0 0.023505 1 61742 12.663 12.663 1 1.0228 1.0414 0 30643000 13237000 17406000 19812 1411 7486 7659 31018 31018 LAVDEEENADNNTK 14 1 0 Unmodified _LAVDEEENADNNTK_ 0 0 0 A8K6Q8;P02786;F8WBE5 A8K6Q8 A8K6Q8 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.3609 2 781.352456 1560.69036 71162.2 0.93145 0.00072779 0.4099 0.00032028 1.3414 0.0010481 781.352547911668 785.360541455729 27.282 0.29561 27.282 27.1 27.396 1.9073E-06 44 13 6 0 0 0 1.9302E-07 2 12494 112.13 112.13 1 0.95808 0.96985 0 5729200 3176900 2552300 19813 761 7487 7660 31019;31020 31019 LAVDEEENADNNTK 14 1 0 Unmodified _LAVDEEENADNNTK_ 0 0 0 A8K6Q8;P02786;F8WBE5 A8K6Q8 A8K6Q8 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.3599 2 781.352456 1560.69036 71723.45 1.2277 0.00095926 0.62935 0.00049175 1.857 0.001451 781.353040498524 785.359750388867 26.853 0.18151 26.853 26.745 26.926 1.9073E-06 31 8 5 0 0 0 1.1302E-14 2 12204 134.3 112.22 1 0.6839 0.70739 0 9745100 6331000 3414100 19814 761 7487 7660 31021;31022 31021 LAVDEEENADNNTK 14 1 0 Unmodified _LAVDEEENADNNTK_ 0 0 0 A8K6Q8;P02786;F8WBE5 A8K6Q8 A8K6Q8 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 785.3608 2 781.352456 1560.69036 70601.41 0.52025 0.0004065 0.18578 0.00014516 0.70603 0.00055166 781.352626091417 785.861401762487 31.194 0.30281 31.194 31.054 31.357 0 61 19 5 0 0 0 0.050017 1 13126 25.474 25.474 1 0.4036 0.33863 0 1618700 1100700 517960 19815 761 7487 7660 31023 31023 LAVDTFPAR 9 0 1 Unmodified _LAVDTFPAR_ 0 0 0 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2753 2 495.274367 988.53418 85582.03 0.36399 0.00018028 1.0471 0.00051862 1.4111 0.00069889 495.275199103581 500.278407266241 74.593 0.86317 74.593 74.057 74.921 -7.6294E-06 194 59 5 0 0 0 0.0077672 2 39625 74.255 56.869 1 1.6168 1.3516 0 3544200 1525400 2018800 19816 2052 7488 7661 31024;31025 31025 LAVDTFPAR 9 0 1 Unmodified _LAVDTFPAR_ 0 0 0 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.2787 2 495.274367 988.53418 85606.19 0.033338 1.6512E-05 0.93123 0.00046121 0.96457 0.00047773 495.27512093014 500.27857148091 74.942 0.78838 74.942 74.444 75.233 0 182 47 6 0 0 0 0.044207 1 38906 40.352 10.166 1 1.6239 1.3785 0 3097000 1316000 1781000 19817 2052 7488 7661 31026 31026 LAVEALSSLDGDLAGR 16 0 1 Unmodified _LAVEALSSLDGDLAGR_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;G3V4N7 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.928 2 793.922852 1585.83115 NaN NaN NaN -0.01359 -1.0789E-05 NaN NaN NaN NaN 110.04 0.52922 110.04 109.8 110.33 7.6294E-06 0 0 0 1.3707E-08 1 69029 97.463 67.132 1 NaN NaN 0 39791000 0 39791000 19818 557 7489 7662 31027 31027 LAVEALSSLDGDLAGR 16 0 1 Unmodified _LAVEALSSLDGDLAGR_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;G3V4N7 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.923 2 793.922852 1585.83115 67533.27 0.78429 0.00062267 -0.072873 -5.7855E-05 0.71142 0.00056481 793.923720301511 798.926915019466 109.47 0.49053 109.47 109.29 109.78 0 127 32 5 0 0 0 1.2655E-06 4 70271 96.103 96.103 1 3.174 3.4645 0 29912000 6879000 23033000 19819 557 7489 7662 31028;31029;31030;31031 31030 LAVEALSSLDGDLAGR 16 0 1 Unmodified _LAVEALSSLDGDLAGR_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;G3V4N7 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 798.9274 2 793.922852 1585.83115 70156.6 0.87128 0.00069173 -0.13919 -0.00011051 0.73209 0.00058123 794.423602949424 799.428445562809 121.36 0.53241 121.36 121.12 121.66 0 40 24 4 0 0 0 0.00015531 1 72156 72.265 28.077 1 2.4008 2.069 0 2659100 913260 1745800 19820 557 7489 7662 31032 31032 LAVEILNK 8 1 0 Unmodified _LAVEILNK_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4;Q6PK38;F8WBH4;C9JZT2 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.2815 2 450.28166 898.548768 91155.77 0.14389 6.4793E-05 0.3193 0.00014378 0.46319 0.00020857 450.281822709139 454.288881612372 72.629 0.29606 72.629 72.483 72.78 0 73 19 6 0 0 0 0.012316 2 42527 67.903 36.613 1 1.6476 1.6537 0 26892000 9482100 17410000 19821 1111 7490 7663 31033;31034 31033 LAVEILNK 8 1 0 Unmodified _LAVEILNK_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4;Q6PK38;F8WBH4;C9JZT2 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.2812 2 450.28166 898.548768 90713.64 -0.21924 -9.8719E-05 0.26258 0.00011823 0.04334 1.9515E-05 450.281766300539 454.288820730987 71.319 0.23857 71.319 71.197 71.435 0 67 17 5 0 0 0 0.0074903 2 42719 82.716 37.179 1 1.6367 1.7229 0 35125000 11748000 23377000 19822 1111 7490 7663 31035;31036 31035 LAVHRNIRDDEGFIIR 16 0 3 Unmodified _LAVHRNIRDDEGFIIR_ 0 0 2 A0A0A0MRM8;A0A0D9SGC1;E7EW20;Q9UM54 A0A0A0MRM8 A0A0A0MRM8 MYO6 Unconventional myosin-VI ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 321.6836 6 321.514589 1923.04388 NaN NaN NaN 2.6263 0.00084439 NaN NaN NaN NaN 20.686 0.28828 20.686 20.54 20.829 0 0 0 0 0.050191 1 7018 6.7282 0 1 NaN NaN 0 4656800 4656800 0 19823 467 7491 7664 31037 31037 LAVLITNSNVR 11 0 1 Unmodified _LAVLITNSNVR_ 0 0 0 Q71UH7;V9HWE7;P51570;C8CHJ6;Q6ZP37 Q71UH7 Q71UH7 GALK1;HEL-S-19;GALK Galactokinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.363 2 600.358962 1198.70337 80226.35 0.76606 0.00045991 -0.24133 -0.00014488 0.52474 0.00031503 600.358374241619 605.362978887454 74.358 0.43225 74.358 74.185 74.618 0 127 36 4 0 0 0 0.0035925 1 44756 59.542 31.77 1 1.2746 1.2631 0 12136000 5386900 6749100 19824 1596 7492 7665 31038 31038 LAVLPYELR 9 0 1 Unmodified _LAVLPYELR_ 0 0 0 B2RAR2;Q9ULX3;H3BUR4 B2RAR2 B2RAR2 NOB1 RNA-binding protein NOB1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.3253 2 537.321317 1072.62808 85977.95 0.8059 0.00043303 -0.0002151 -1.1558E-07 0.80569 0.00043291 537.321752875216 542.325054443297 98.06 0.8027 98.06 97.693 98.496 -7.6294E-06 228 65 5 0 0 0 0.0054512 1 59807 66.692 24.583 1 1.7076 1.7347 0 27716000 9714000 18002000 19825 874 7493 7666 31039 31039 LAVLPYELR 9 0 1 Unmodified _LAVLPYELR_ 0 0 0 B2RAR2;Q9ULX3;H3BUR4 B2RAR2 B2RAR2 NOB1 RNA-binding protein NOB1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.3264 2 537.321317 1072.62808 83914.05 0.85915 0.00046164 -0.068347 -3.6724E-05 0.7908 0.00042492 537.321708969638 542.32501575042 97.239 0.73677 97.239 96.887 97.624 0 213 58 5 0 0 0 0.012016 2 60602 57.859 46.129 1 1.6658 1.806 0 27722000 9889600 17833000 19826 874 7493 7666 31040;31041 31041 LAVLPYELR 9 0 1 Unmodified _LAVLPYELR_ 0 0 0 B2RAR2;Q9ULX3;H3BUR4 B2RAR2 B2RAR2 NOB1 RNA-binding protein NOB1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.3204 2 537.321317 1072.62808 83147.87 0.79335 0.00042628 -0.014026 -7.5366E-06 0.77932 0.00041874 537.321347732734 542.325259795686 110.92 0.51613 110.92 110.62 111.13 -7.6294E-06 66 21 5 0 0 0 0.024384 1 64106 48.283 48.283 1 0.90025 0.78166 0 2335700 1286600 1049100 19827 874 7493 7666 31042 31042 LAVLPYELR 9 0 1 Unmodified _LAVLPYELR_ 0 0 0 B2RAR2;Q9ULX3;H3BUR4 B2RAR2 B2RAR2 NOB1 RNA-binding protein NOB1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.3227 2 537.321317 1072.62808 82395.48 0.68055 0.00036568 0.68501 0.00036807 1.3656 0.00073375 537.321534359445 542.325762155016 110.69 0.40575 110.69 110.49 110.9 7.6294E-06 80 20 6 0 0 0 0.032386 2 63037 45.081 45.081 1 0.95293 0.85339 0 1984800 917600 1067200 19828 874 7493 7666 31043;31044 31044 LAVNMVPFPR 10 0 1 Oxidation (M) _LAVNM(ox)VPFPR_ LAVNM(1)VPFPR LAVNM(118.89)VPFPR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.3196 2 580.318251 1158.62195 76081.77 0.62409 0.00036217 0.70659 0.00041005 1.3307 0.00077222 580.318760250222 585.323063629397 86.305 0.90771 86.305 85.737 86.644 7.6294E-06 348 72 10 0 0 0 1.6867E-08 2 51783 118.89 102.69 1 2.1012 2.4887 0 426060000 137710000 288350000 19829 1452;1660;1723;1441;2004;502;1778 7494 7667 31045;31046 31045 350 LAVNMVPFPR 10 0 1 Oxidation (M) _LAVNM(ox)VPFPR_ LAVNM(1)VPFPR LAVNM(91.06)VPFPR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.3232 2 580.318251 1158.62195 75673.13 0.65659 0.00038103 0.20778 0.00012058 0.86437 0.00050161 580.318668868787 585.322702332824 85.249 0.85822 85.249 84.831 85.689 0 375 71 10 0 0 0 0.0001414 2 52438 91.064 91.064 1 2.2985 2.6662 0 318580000 98803000 219780000 19830 1452;1660;1723;1441;2004;502;1778 7494 7667 31047;31048 31048 350 LAVNMVPFPR 10 0 1 Oxidation (M) _LAVNM(ox)VPFPR_ LAVNM(1)VPFPR LAVNM(52.72)VPFPR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.3195 2 580.318251 1158.62195 77874.73 1.0327 0.00059929 -0.10922 -6.3385E-05 0.92346 0.0005359 580.318492482735 585.322199466439 115.65 0.40928 115.65 115.41 115.82 0 92 20 6 0 0 0 0.0052843 2 67765 52.716 52.716 1 1.6253 1.3973 0 6656100 2459600 4196600 19831 1452;1660;1723;1441;2004;502;1778 7494 7667 31049;31050 31050 350 LAVNMVPFPR 10 0 1 Oxidation (M) _LAVNM(ox)VPFPR_ LAVNM(1)VPFPR LAVNM(50.61)VPFPR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.319 2 580.318251 1158.62195 77080.34 0.59936 0.00034782 -0.11138 -6.4634E-05 0.48798 0.00028318 580.317636977168 585.322549509027 115.42 0.54517 115.42 115.13 115.68 7.6294E-06 93 25 6 0 0 0 0.0060358 2 66760 50.607 50.607 1 1.3596 1.1693 0 4428900 1836000 2592900 19832 1452;1660;1723;1441;2004;502;1778 7494 7667 31051;31052 31052 350 LAVNMVPFPR 10 0 1 Oxidation (M) _LAVNM(ox)VPFPR_ LAVNM(1)VPFPR LAVNM(51.85)VPFPR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.3192 2 580.318251 1158.62195 NaN NaN NaN 0.14451 8.386E-05 NaN NaN NaN NaN 98.552 0.64692 98.552 98.246 98.893 7.6294E-06 0 0 0 0.0095233 1 54698 51.854 51.854 1 NaN NaN 0 3822900 3822900 0 19833 1452;1660;1723;1441;2004;502;1778 7494 7667 31053 31053 350 LAVNMVPFPR 10 0 1 Unmodified _LAVNMVPFPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.3221 2 572.320794 1142.62703 80740.57 0.67048 0.00038373 -0.34208 -0.00019578 0.3284 0.00018795 572.320517199367 577.324719519691 103.59 0.78316 103.59 103.4 104.18 0 248 63 6 0 0 0 2.8491E-09 1 63885 125.81 125.81 1 1.1397 1.1803 0 23053000 10751000 12303000 19834 1452;1660;1723;1441;2004;502;1778 7494 7668 31054 31054 LAVNMVPFPR 10 0 1 Unmodified _LAVNMVPFPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3249 2 572.320794 1142.62703 79525.65 0.82522 0.00047229 -0.39697 -0.00022719 0.42825 0.0002451 572.320396269681 577.32465201957 102.81 0.69243 102.81 102.61 103.31 0 222 55 6 0 0 0 7.6303E-06 2 64980 107.01 107.01 1 1.2047 1.3406 0 43494000 18079000 25416000 19835 1452;1660;1723;1441;2004;502;1778 7494 7668 31055;31056 31055 LAVNMVPFPR 10 0 1 Unmodified _LAVNMVPFPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.3223 2 572.320794 1142.62703 NaN NaN NaN 0.054711 3.1312E-05 NaN NaN NaN NaN 115.63 0.44601 115.63 115.43 115.88 0 0 0 0 0.0049742 1 67687 87.181 67.704 1 NaN NaN 0 6833300 6833300 0 19836 1452;1660;1723;1441;2004;502;1778 7494 7668 31057 31057 LAVNMVPFPR 10 0 1 Unmodified _LAVNMVPFPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB1;TUBB8;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.3251 2 572.320794 1142.62703 79369.37 0.59857 0.00034257 0.12411 7.1032E-05 0.72268 0.0004136 572.320861131007 577.324956578929 115.4 0.54517 115.4 115.13 115.68 0 146 25 8 0 0 0 0.00041404 2 66603 87.251 87.251 1 1.4073 1.1449 0 12424000 5293100 7131300 19837 1452;1660;1723;1441;2004;502;1778 7494 7668 31058;31059 31059 LAVSAQSEPAR 11 0 1 Unmodified _LAVSAQSEPAR_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8052 2 564.80402 1127.59349 80132.59 0.75102 0.00042418 0.20492 0.00011574 0.95594 0.00053992 564.804178703683 569.808237063292 28.895 0.3283 28.895 28.719 29.048 0 76 16 8 0 0 0 1.203E-40 2 13828 189.38 143.25 1 1.2134 1.3494 0 75707000 29628000 46079000 19838 1412 7495 7669 31060;31061 31061 LAVSAQSEPAR 11 0 1 Unmodified _LAVSAQSEPAR_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.8086 2 564.80402 1127.59349 80780.78 0.73491 0.00041508 -0.20026 -0.00011311 0.53465 0.00030197 564.803994295656 569.808026400355 28.157 0.17831 28.157 28.056 28.235 0 28 7 6 0 0 0 8.0786E-05 1 13361 97.965 44.638 1 1.5214 1.7365 0 144920000 58609000 86309000 19839 1412 7495 7669 31062 31062 LAVSAQSEPAR 11 0 1 Unmodified _LAVSAQSEPAR_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.8044 2 564.80402 1127.59349 78856.09 0.32732 0.00018487 0.61712 0.00034855 0.94444 0.00053343 564.804410892104 569.808270000539 32.747 0.32348 32.747 32.573 32.896 0 66 14 6 0 0 0 3.2364E-06 2 14184 111.46 78.615 1 1.5914 1.3459 0 9472000 3784000 5688000 19840 1412 7495 7669 31063;31064 31064 LAVSAQSEPAR 11 0 1 Unmodified _LAVSAQSEPAR_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.8083 2 564.80402 1127.59349 78450.88 0.43514 0.00024577 1.0084 0.00056954 1.4435 0.00081531 564.805293640112 569.808473633887 32.84 0.22477 32.84 32.715 32.939 0 25 8 5 0 0 0 0.00022817 1 13776 91.584 44.397 1 2.7263 2.2181 0 9786800 2982700 6804200 19841 1412 7495 7669 31065 31065 LAVVCR 6 0 1 Unmodified _LAVVCR_ 0 0 0 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 359.2289 2 359.207441 716.40033 100794.3 0.17768 6.3825E-05 0.15307 5.4984E-05 0.33075 0.00011881 359.207402304444 364.211577503489 28.309 0.47248 28.309 28.026 28.498 0 107 34 4 0 0 0 0.051958 1 13305 123.07 56.633 1 0.79655 0.85414 0 46214000 25988000 20226000 19842 1752 7496 7670 31066 31066 LAVYIDR 7 0 1 Unmodified _LAVYIDR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.2448 2 425.245078 848.475603 91581.62 0.16095 6.8444E-05 0.19695 8.3753E-05 0.35791 0.0001522 425.245023987789 430.249113299438 57.52 1.0961 57.52 56.817 57.913 0 353 88 8 0 0 0 0.026793 1 32316 79.146 26.462 1 1.2194 1.4152 0 175200000 86673000 88524000 19843 1440 7497 7671 31067 31067 LAVYQAGASEGAER 14 0 1 Unmodified _LAVYQAGASEGAER_ 0 0 0 CON__Q03247 CON__Q03247 CON__Q03247 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3565 2 711.354605 1420.69466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.296 1 41.296 40.796 41.796 -3.8147E-06 0 0 0 0.0034421 1 22171 57.019 38.239 1 + 19844 1167 7498 7672 31068 31068 LAWALALR 8 0 1 Unmodified _LAWALALR_ 0 0 0 Q92621;B4DM61 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.2847 2 457.284537 912.554522 95158.3 0.42044 0.00019226 -0.21573 -9.865E-05 0.20471 9.361E-05 457.284371547416 462.28845981238 104.59 0.45926 104.59 104.28 104.74 0 71 38 4 0 0 0 0.027969 1 64615 53.554 53.554 1 1.349 1.4441 0 3447400 1253400 2194000 19845 1950 7499 7673 31069 31069 LAWALALR 8 0 1 Unmodified _LAWALALR_ 0 0 0 Q92621;B4DM61 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.2843 2 457.284537 912.554522 96485.86 -0.17755 -8.1189E-05 0.23626 0.00010804 0.058711 2.6848E-05 457.284587154904 462.288666603345 103.57 0.35666 103.57 103.45 103.8 0 71 30 4 0 0 0 0.034026 1 65574 49.59 42.68 1 1.0753 1.1064 0 4890400 2240300 2650100 19846 1950 7499 7673 31070 31070 LAWEQQEPGER 11 0 1 Unmodified _LAWEQQEPGER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.8243 2 671.822941 1341.63133 75493.77 0.70965 0.00047676 0.1398 9.3924E-05 0.84946 0.00057069 671.823080357991 676.826987054332 47.899 0.60445 47.899 47.616 48.22 0 212 53 6 0 0 0 2.3712E-12 2 25921 140.16 140.16 1 0.70458 0.77993 0 61510000 36095000 25415000 19847 1726 7500 7674 31071;31072 31071 LAWEQQEPGER 11 0 1 Unmodified _LAWEQQEPGER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.8277 2 671.822941 1341.63133 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.697 1 47.697 47.197 48.197 0 0 0 0 5.1378E-09 1 25908 115.78 45.828 1 19848 1726 7500 7674 31073 31073 LAWEQQEPGER 11 0 1 Unmodified _LAWEQQEPGER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 676.8275 2 671.822941 1341.63133 75615.01 0.77398 0.00051998 0.11933 8.0169E-05 0.89331 0.00060015 671.823124791762 676.827080967133 46.729 0.54018 46.729 46.471 47.011 0 256 46 7 0 0 0 9.2249E-07 2 25723 112.36 112.36 1 0.72646 0.81224 0 44653000 24380000 20274000 19849 1726 7500 7674 31074;31075 31074 LAWEQQEPGER 11 0 1 Unmodified _LAWEQQEPGER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.8276 2 671.822941 1341.63133 74635.68 0.6158 0.00041371 -0.056822 -3.8174E-05 0.55898 0.00037554 671.822726642623 676.827025085856 55.24 0.82527 55.24 54.904 55.729 -3.8147E-06 271 53 7 0 0 0 7.1593E-10 3 27595 126.71 66.603 1 1.2328 1.0134 0 17594000 7681500 9912400 19850 1726 7500 7674 31076;31077;31078 31078 LAWEQQEPGER 11 0 1 Unmodified _LAWEQQEPGER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 676.827 2 671.822941 1341.63133 74924.74 0.51218 0.00034409 0.14019 9.4183E-05 0.65237 0.00043828 671.823054904943 676.827046540709 55.744 0.80887 55.744 55.425 56.234 3.8147E-06 271 51 8 0 0 0 0.00018263 2 27272 93.556 42.006 1 1.2134 1.015 0 16390000 7064700 9325200 19851 1726 7500 7674 31079;31080 31080 LAWGQPVGLR 10 0 1 Unmodified _LAWGQPVGLR_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A0U1RRC8;A0A0U1RQX5;A0A0U1RQX9 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.8167 2 548.816733 1095.61891 NaN NaN NaN -2.8567 -0.0015678 NaN NaN NaN NaN 84.513 0.22052 84.513 84.45 84.67 0 0 0 0 0.012567 1 50667 60.682 20.615 1 NaN NaN 0 5801700 5801700 0 19852 1575 7501 7675 31081 31081 LAWGQPVGLR 10 0 1 Unmodified _LAWGQPVGLR_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A0U1RRC8;A0A0U1RQX5;A0A0U1RQX9 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.8214 2 548.816733 1095.61891 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.485 1 84.485 83.985 84.985 0 0 0 0 0.00012219 1 50650 81.296 42.274 1 19853 1575 7501 7675 31082 31082 LAYELYTEALGIDPNNIK 18 1 0 Unmodified _LAYELYTEALGIDPNNIK_ 0 0 0 B4DKK3;B7Z9W6;Q59EH7;Q99615;K7EPP7;K7ESP1;K7EJ24 B4DKK3 B4DKK3 DNAJC7 DnaJ homolog subfamily C member 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1019.0338 2 1019.03059 2036.04662 63971.16 0.71224 0.00072579 0.40774 0.0004155 1.12 0.0011413 1019.53344382057 1023.03742539426 120.16 0.37815 120.16 119.99 120.37 0 87 27 5 0 0 0 5.8534E-05 1 79436 55.452 55.452 1 1.6187 1.694 0 10453000 4353100 6100000 19854 990 7502 7676 31083 31083 LAYIAHPK 8 1 0 Unmodified _LAYIAHPK_ 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.7768 2 456.76872 911.522887 87989.45 0.30077 0.00013738 -1.3923 -0.00063596 -1.0915 -0.00049858 456.768053175815 460.775234155051 25.952 0.95951 25.952 25.763 26.723 0 235 55 10 0 0 0 0.0067093 2 11370 86.086 56.528 1 0.73291 0.87778 0 928380000 537030000 391350000 19855 127 7503 7677 31084;31085 31084 LAYIAHPK 8 1 0 Unmodified _LAYIAHPK_ 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 307.5192 3 304.848239 911.522887 NaN NaN NaN 0.060004 1.8292E-05 NaN NaN NaN NaN 25.952 0.48835 25.952 25.78 26.268 0 0 0 0 0.029446 1 11408 38.962 24.805 1 NaN NaN 0 114030000 0 114030000 19856 127 7503 7677 31086 31086 LAYIAHPK 8 1 0 Unmodified _LAYIAHPK_ 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.7753 2 456.76872 911.522887 89222.47 0.37663 0.00017203 -0.64119 -0.00029288 -0.26456 -0.00012084 456.768585340759 460.775390684476 25.405 0.74949 25.405 25.128 25.877 0 169 38 10 0 0 0 0.0059854 1 10950 88.734 88.734 1 0.70813 0.83702 0 1474700000 888590000 586130000 19857 127 7503 7677 31087 31087 LAYIAHPK 8 1 0 Unmodified _LAYIAHPK_ 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 307.5196 3 304.848239 911.522887 106473.8 0.44576 0.00013589 -0.26903 -8.2014E-05 0.17673 5.3876E-05 304.848140309169 307.519441751707 25.386 0.47128 25.386 25.219 25.69 0 109 20 9 0 0 0 0.014567 2 10954 38.16 30.68 1 0.75099 0.88113 0 335420000 178330000 157080000 19858 127 7503 7677 31088;31089 31088 LAYIAHPK 8 1 0 Unmodified _LAYIAHPK_ 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.7758 2 456.76872 911.522887 88275.24 0.17667 8.0697E-05 -0.52782 -0.00024109 -0.35115 -0.0001604 456.76860326656 460.775571574958 28.434 1.2821 28.434 28.2 29.482 0 365 86 10 0 0 0 0.0092066 2 11305 75.311 53.783 1 0.58957 0.50945 0 109270000 68760000 40508000 19859 127 7503 7677 31090;31091 31090 LAYIAHPK 8 1 0 Unmodified _LAYIAHPK_ 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 456.7686 2 456.76872 911.522887 87431.37 -0.30765 -0.00014052 0.14085 6.4337E-05 -0.16679 -7.6186E-05 456.768647916412 460.776085856137 28.499 1.908 28.499 27.898 29.806 1.9073E-06 438 111 8 0 0 0 0.013659 2 10736 64.803 47.563 1 0.59188 0.50065 0 58962000 37453000 21509000 19860 127 7503 7677 31092;31093 31092 LAYINPDLALEEK 13 1 0 Unmodified _LAYINPDLALEEK_ 0 0 0 V9HW72;A8K690;P31948 V9HW72 V9HW72 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.9098 2 744.900857 1487.78716 71586.96 0.82897 0.0006175 -0.28845 -0.00021487 0.54052 0.00040263 744.900052107136 749.409531273933 101.17 0.55036 101.17 100.9 101.45 7.6294E-06 128 42 5 0 0 0 0.0035417 1 61991 49.466 49.466 1 2.0735 2.0337 0 8848000 2804900 6043000 19861 758 7504 7678 31094 31094 LAYINPDLALEEK 13 1 0 Unmodified _LAYINPDLALEEK_ 0 0 0 V9HW72;A8K690;P31948 V9HW72 V9HW72 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.4094 2 744.900857 1487.78716 70833.99 0.74903 0.00055796 -0.36686 -0.00027327 0.38218 0.00028468 744.900501605345 749.409429342392 100.46 0.52037 100.46 100.2 100.72 7.6294E-06 129 42 6 0 0 0 0.034911 1 62968 32.523 32.523 1 2.2801 2.3359 0 17572000 5470800 12101000 19862 758 7504 7678 31095 31095 LAYLQILSEETSVK 14 1 0 Unmodified _LAYLQILSEETSVK_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4;Q6PK38 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.4404 2 797.440346 1592.86614 70304.05 0.73146 0.0005833 -0.045877 -3.6584E-05 0.68559 0.00054671 797.440366333567 801.447977166869 113.5 0.41998 113.5 113.29 113.71 -7.6294E-06 109 28 5 0 0 0 0.00014486 2 73679 77.64 77.64 1 1.2765 1.3348 0 10281000 4119600 6161100 19863 1111 7505 7679 31096;31097 31097 LAYLQILSEETSVK 14 1 0 Unmodified _LAYLQILSEETSVK_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4;Q6PK38 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 801.4485 2 797.440346 1592.86614 71194.35 0.76886 0.00061312 1.2323 0.0009827 2.0012 0.0015958 797.943143744869 801.448367234141 125.53 0.33981 125.53 125.33 125.67 0 65 15 6 0 0 0 0.017369 2 74491 34.692 34.692 1 1.1132 0.87308 0 2063800 1091600 972220 19864 1111 7505 7679 31098;31099 31099 LAYQVLAEK 9 1 0 Unmodified _LAYQVLAEK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.7975 2 517.797675 1033.5808 84183.07 0.29462 0.00015255 0.27622 0.00014303 0.57083 0.00029558 517.797623625812 521.804932348576 62.64 1.2065 62.64 62.244 63.45 0 611 115 7 0 0 0 1.073E-05 3 36242 126.41 72.255 1 0.87306 0.98983 0 93777000 51134000 42644000 19865 1995 7506 7680 31100;31101;31102 31102 LAYQVLAEK 9 1 0 Unmodified _LAYQVLAEK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.7974 2 517.797675 1033.5808 84081.97 0.4522 0.00023415 0.27327 0.0001415 0.72547 0.00037564 517.797611483241 521.804922574367 61.315 1.2313 61.315 60.982 62.214 3.8147E-06 555 115 6 0 0 0 0.00034716 5 36247 101.25 52.497 1 0.85453 0.96455 0 127880000 64673000 63210000 19866 1995 7506 7680 31103;31104;31105;31106;31107 31105 LAYQVLAEK 9 1 0 Unmodified _LAYQVLAEK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.8049 2 517.797675 1033.5808 83373.83 0.25088 0.00012991 0.27478 0.00014228 0.52566 0.00027219 517.797632952493 521.80484975503 72.331 1.2499 72.331 71.918 73.168 0 493 92 7 0 0 0 0.0013235 5 38328 97.431 65.11 1 1.5787 1.2497 0 18451000 6723000 11728000 19867 1995 7506 7680 31108;31109;31110;31111;31112 31110 LAYQVLAEK 9 1 0 Unmodified _LAYQVLAEK_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.798 2 517.797675 1033.5808 83871.04 0.13334 6.9042E-05 0.24764 0.00012823 0.38098 0.00019727 517.797680921054 521.804821696121 72.691 1.2812 72.691 72.288 73.569 0 540 102 7 0 0 0 0.0049289 4 37504 68.016 40.39 1 1.6328 1.3122 0 16730000 6538800 10192000 19868 1995 7506 7680 31113;31114;31115;31116 31114 LCAMVADNPSYNTK 14 1 0 Oxidation (M) _LCAM(ox)VADNPSYNTK_ LCAM(1)VADNPSYNTK LCAM(59.2)VADNPSYNTK 0 1 0 P49916;K7ERZ5;K7ENR9;Q96DF0 P49916 P49916 LIG3 DNA ligase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.3686 2 800.360715 1598.70688 NaN NaN NaN -0.51479 -0.00041202 NaN NaN NaN NaN 41.799 0.044483 41.799 41.774 41.818 0 0 0 0 0.0013346 1 22061 59.198 43.933 1 NaN NaN 0 1247500 0 1247500 19869 1589 7507 7681 31117 31117 1370 LCAMVADNPSYNTK 14 1 0 Oxidation (M) _LCAM(ox)VADNPSYNTK_ LCAM(1)VADNPSYNTK LCAM(50.35)VADNPSYNTK 0 1 0 P49916;K7ERZ5;K7ENR9;Q96DF0 P49916 P49916 LIG3 DNA ligase 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.3622 2 800.360715 1598.70688 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.984 1 40.984 40.484 41.484 0 0 0 0 0.0052763 1 21987 50.354 35.663 1 19870 1589 7507 7681 31118 31118 1370 LCAWLVSELR 10 0 1 Unmodified _LCAWLVSELR_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;Q05CT2;C9J3G8 I6L9E8 I6L9E8 FAM98A Protein FAM98A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.3428 2 623.834265 1245.65398 NaN NaN NaN 1.2268 0.0007653 NaN NaN NaN NaN 120.55 0.28326 120.55 120.34 120.62 0 0 0 0 0.051194 1 71580 46.462 30.259 1 NaN NaN 0 1071400 0 1071400 19871 1324 7508 7682 31119 31119 LCEIER 6 0 1 Unmodified _LCEIER_ 0 0 0 B4DNW3;P35659;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 410.2053 2 410.205096 818.395638 93677.13 -0.29514 -0.00012107 0.56484 0.0002317 0.2697 0.00011063 410.205201048699 415.209334689038 26.114 0.70183 26.114 25.943 26.645 -1.9073E-06 123 29 8 0 0 0 0.054059 1 9765 72.355 11.232 1 0.85145 0.70636 0 20654000 11032000 9621400 19872 1546;1018 7509 7683 31120 31120 LCEQLSTVIPNSHVYYR 17 0 1 Unmodified _LCEQLSTVIPNSHVYYR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.3535 3 693.682446 2078.02551 72540.66 0.81221 0.00056342 0.014349 9.9537E-06 0.82656 0.00057337 694.016704871811 697.352616383271 86.772 0.60635 86.772 86.463 87.069 0 201 42 6 0 0 0 0.032111 1 52276 18.471 18.471 1 1.0919 1.0974 0 15950000 7565700 8384500 19873 2048 7510 7684 31121 31121 LCEQLSTVIPNSHVYYR 17 0 1 Unmodified _LCEQLSTVIPNSHVYYR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.3528 3 693.682446 2078.02551 72007.3 0.53146 0.00036867 -0.40789 -0.00028294 0.12357 8.5721E-05 693.682141940022 697.352335583622 99.31 0.64396 99.31 98.99 99.634 0 172 35 7 0 0 0 0.03608 1 56109 17.565 16.171 1 1.0373 0.84995 0 12830000 6525900 6304300 19874 2048 7510 7684 31122 31122 LCESLEELQNLNGK 14 1 0 Unmodified _LCESLEELQNLNGK_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 828.414 2 823.906344 1645.79814 NaN NaN NaN -0.74676 -0.00061526 NaN NaN NaN NaN 98.904 0.44791 98.904 98.692 99.14 7.6294E-06 0 0 0 0.0088816 1 55795 52.837 42.606 1 NaN NaN 0 1320600 0 1320600 19875 590 7511 7685 31123 31123 LCESLEELQNLNGK 14 1 0 Unmodified _LCESLEELQNLNGK_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.9131 2 823.906344 1645.79814 NaN NaN NaN -0.56405 -0.00046472 NaN NaN NaN NaN 98.801 0.36168 98.801 98.607 98.968 0 0 0 0 0.017575 1 54930 46.955 40.422 1 NaN NaN 0 1434000 0 1434000 19876 590 7511 7685 31124 31124 LCFEGLR 7 0 1 Unmodified _LCFEGLR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.7332 2 447.728738 893.442923 NaN NaN NaN 0.024081 1.0782E-05 NaN NaN NaN NaN 69.611 0.66473 69.611 69.261 69.926 0 0 0 0 0.046012 1 41351 60.294 17.819 1 NaN NaN 0 12805000 0 12805000 19877 1754 7512 7686 31125 31125 LCFSTAQHAS 10 0 0 Unmodified _LCFSTAQHAS_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.2556 2 561.255848 1120.49714 NaN NaN NaN -0.17558 -9.8548E-05 NaN NaN NaN NaN 39.423 0.56558 39.423 39.14 39.706 0 0 0 0 0.00013837 1 20321 93.162 86.338 1 19878 865 7513 7687 31126 31126 LCGPCSVQAVVLNDK 15 1 0 Unmodified _LCGPCSVQAVVLNDK_ 0 0 0 Q99549;H0Y6J1 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 830.4128 2 830.413282 1658.81201 NaN NaN NaN -0.078524 -6.5208E-05 NaN NaN NaN NaN 96.439 0.39622 96.439 96.208 96.605 7.6294E-06 0 0 0 0.050189 1 54076 37.613 30.76 1 NaN NaN 0 1274000 1274000 0 19879 1994 7514 7688 31127 31127 LCGPCSVQAVVLNDK 15 1 0 Unmodified _LCGPCSVQAVVLNDK_ 0 0 0 Q99549;H0Y6J1 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 830.4152 2 830.413282 1658.81201 67462.7 0.53048 0.00044052 0.16919 0.0001405 0.69968 0.00058102 830.413485065838 834.42100372342 96.253 0.45082 96.253 96.029 96.48 0 119 27 7 0 0 0 0.00064629 2 53189 54.023 48.051 1 1.7374 1.4106 0 2866300 1303200 1563100 19880 1994 7514 7688 31128;31129 31129 LCLAYGGSDVSR 12 0 1 Unmodified _LCLAYGGSDVSR_ 0 0 0 Q9H981 Q9H981 Q9H981 ACTR8 Actin-related protein 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.314 2 649.313894 1296.61324 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.215 1 61.215 60.715 61.715 3.8147E-06 0 0 0 0.041873 1 35852 43.512 14.039 1 19881 2044 7515 7689 31130 31130 LCLELLNVGVESK 13 1 0 Unmodified _LCLELLNVGVESK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77;H0YEN8;H0YDC0;H0YCF8;H0YE44 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.9053 2 737.402709 1472.79087 74877.59 0.96019 0.00070805 0.56984 0.0004202 1.53 0.0011283 737.403487174127 741.409937258387 125.84 0.29298 125.84 125.66 125.96 -7.6294E-06 29 13 4 0 0 0 0.0072694 1 75635 45.257 45.257 1 1.9565 1.6031 0 2467300 869270 1598100 19882 1054 7516 7690 31131 31131 LCLHNLPK 8 1 0 Unmodified _LCLHNLPK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.7859 2 497.778762 993.542971 87984.02 0.092515 4.6052E-05 -0.23762 -0.00011828 -0.14511 -7.2231E-05 497.778390638303 501.785674578542 46.437 0.33447 46.437 46.265 46.599 0 83 20 5 0 0 0 0.019676 2 22383 58.981 49.465 1 1.2576 1.005 0 2910600 1137800 1772800 19883 214 7517 7691 31132;31133 31133 LCLNICVGESGDR 13 0 1 Unmodified _LCLNICVGESGDR_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.8477 2 746.847775 1491.681 69757.25 0.90565 0.00067638 -0.75085 -0.00056077 0.1548 0.00011561 746.847651326264 751.851762753756 86.579 0.72295 86.579 86.153 86.876 7.6294E-06 241 53 8 0 0 0 0.00015089 3 52123 84.658 63.788 1 0.90475 1.0045 0 70209000 37548000 32661000 19884 1652 7518 7692 31134;31135;31136 31136 LCLNICVGESGDR 13 0 1 Unmodified _LCLNICVGESGDR_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.8521 2 746.847775 1491.681 69119.25 0.82311 0.00061474 -0.41458 -0.00030963 0.40853 0.00030511 746.847798604696 751.851737568702 85.692 0.65707 85.692 85.263 85.92 -7.6294E-06 266 49 8 0 0 0 2.1987E-30 2 52660 170.52 124.06 1 0.83058 0.94453 0 119350000 65896000 53457000 19885 1652 7518 7692 31137;31138 31138 LCLNICVGESGDR 13 0 1 Unmodified _LCLNICVGESGDR_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.8521 2 746.847775 1491.681 69718.62 0.8277 0.00061817 -0.57034 -0.00042596 0.25736 0.00019221 746.847555986125 751.851749950538 99.185 0.99831 99.185 98.666 99.664 0 302 57 9 0 0 0 1.4318E-18 2 55869 138.25 101.06 1 1.1386 0.96444 0 31650000 16466000 15184000 19886 1652 7518 7692 31139;31140 31140 LCLNICVGESGDR 13 0 1 Unmodified _LCLNICVGESGDR_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 746.848 2 746.847775 1491.681 69797.98 0.56801 0.00042421 -0.29993 -0.000224 0.26807 0.00020021 746.847679563839 751.85193094629 98.959 0.83788 98.959 98.624 99.462 0 268 50 9 0 0 0 0.00035286 2 55109 63.073 53.12 1 1.0493 0.91534 0 28820000 13825000 14996000 19887 1652 7518 7692 31141;31142 31142 LCLQHEDLAK 10 1 0 Unmodified _LCLQHEDLAK_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.8148 2 613.81353 1225.61251 NaN NaN NaN 0.66776 0.00040988 NaN NaN NaN NaN 37.975 0.23395 37.975 37.862 38.096 0 0 0 0 0.010114 1 19425 63.216 44.776 1 NaN NaN 0 4284300 4284300 0 19888 1565 7519 7693 31143 31143 LCLQHEDLAK 10 1 0 Unmodified _LCLQHEDLAK_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8235 2 613.81353 1225.61251 NaN NaN NaN 3.0224 0.0018552 NaN NaN NaN NaN 36.736 0.25587 36.736 36.613 36.869 0 0 0 0 0.021646 1 18916 54.191 12.211 1 NaN NaN 0 6281800 0 6281800 19889 1565 7519 7693 31144 31144 LCNIFSTK 8 1 0 Unmodified _LCNIFSTK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.7549 2 491.754953 981.495352 85527.64 0.058514 2.8775E-05 -0.12674 -6.2325E-05 -0.068226 -3.355E-05 491.754847673133 495.761904460952 62.26 1.0984 62.26 61.889 62.988 0 472 100 6 0 0 0 0.00090957 3 36010 125.81 72.001 1 0.67743 0.78214 0 221170000 134020000 87146000 19890 1471;1679 7520 7694 31145;31146;31147 31146 LCNIFSTK 8 1 0 Unmodified _LCNIFSTK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.7622 2 491.754953 981.495352 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.992 1 61.992 61.492 62.492 0 0 0 0 0.00021515 1 35542 113.5 59.945 1 19891 1471;1679 7520 7694 31148 31148 LCNIFSTK 8 1 0 Unmodified _LCNIFSTK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.755 2 491.754953 981.495352 85360.59 0.15051 7.4014E-05 -0.099598 -4.8978E-05 0.050912 2.5036E-05 491.754791595978 495.761940538749 60.957 1.3391 60.957 60.428 61.767 0 647 120 8 0 0 0 0.0009698 3 35494 122.13 79.005 1 0.65629 0.76792 0 299220000 172250000 126960000 19892 1471;1679 7520 7694 31149;31150;31151 31150 LCNIFSTK 8 1 0 Unmodified _LCNIFSTK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.7645 2 491.754953 981.495352 85226.43 0.037468 1.8425E-05 -0.14906 -7.3299E-05 -0.11159 -5.4874E-05 491.755124635563 495.761896330038 71.563 1.0972 71.563 71.286 72.383 0 440 82 10 0 0 0 0.0029104 3 37761 98.458 49.897 1 1.3078 1.1417 0 170710000 74084000 96628000 19893 1471;1679 7520 7694 31152;31153;31154 31154 LCNIFSTK 8 1 0 Unmodified _LCNIFSTK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.7623 2 491.754953 981.495352 84853.6 -0.1762 -8.6647E-05 0.27482 0.00013515 0.098623 4.8498E-05 491.755205786792 495.762091739363 71.951 1.0711 71.951 71.593 72.665 0 435 85 10 0 0 0 0.014493 2 37051 62.88 47.51 1 1.315 1.1298 0 151750000 64458000 87291000 19894 1471;1679 7520 7694 31155;31156 31155 LCNLEEGSPGSGTYTR 16 0 1 Unmodified _LCNLEEGSPGSGTYTR_ 0 0 0 R4GNH9;R4GMQ7;B1AMU7;B1AMU4;Q9Y3B2;B1AMU3 R4GNH9 R4GNH9 EXOSC1 Exosome complex component CSL4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 875.9013 2 870.896508 1739.77846 66242.14 0.60389 0.00052593 0.12536 0.00010917 0.72925 0.0006351 870.896507059638 875.900330789304 47.739 0.45013 47.739 47.569 48.019 0 161 39 6 0 0 0 5.9705E-13 2 25872 124.12 100.37 1 0.83287 0.85206 0 32377000 15724000 16652000 19895 817 7521 7695 31157;31158 31158 LCNLEEGSPGSGTYTR 16 0 1 Unmodified _LCNLEEGSPGSGTYTR_ 0 0 0 R4GNH9;R4GMQ7;B1AMU7;B1AMU4;Q9Y3B2;B1AMU3 R4GNH9 R4GNH9 EXOSC1 Exosome complex component CSL4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 875.9003 2 870.896508 1739.77846 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.884 1 47.884 47.384 48.384 0 0 0 0 0.0010162 1 26023 68.44 52.811 1 19896 817 7521 7695 31159 31159 LCNLEEGSPGSGTYTR 16 0 1 Unmodified _LCNLEEGSPGSGTYTR_ 0 0 0 R4GNH9;R4GMQ7;B1AMU7;B1AMU4;Q9Y3B2;B1AMU3 R4GNH9 R4GNH9 EXOSC1 Exosome complex component CSL4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.9 2 870.896508 1739.77846 66034.06 0.76122 0.00066294 0.44365 0.00038638 1.2049 0.0010493 870.896723017162 875.900580313736 46.636 0.47846 46.636 46.448 46.926 3.8147E-06 194 40 6 0 0 0 2.9834E-05 4 25704 85.288 76.559 1 0.91283 0.92328 0 19934000 10056000 9878200 19897 817 7521 7695 31160;31161;31162;31163 31161 LCNLEEGSPGSGTYTR 16 0 1 Unmodified _LCNLEEGSPGSGTYTR_ 0 0 0 R4GNH9;R4GMQ7;B1AMU7;B1AMU4;Q9Y3B2;B1AMU3 R4GNH9 R4GNH9 EXOSC1 Exosome complex component CSL4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 870.8971 2 870.896508 1739.77846 65198.79 0.48659 0.00042377 0.23668 0.00020612 0.72327 0.00062989 870.896660347292 875.901055729704 55.735 0.60002 55.735 55.481 56.081 0 216 37 7 0 0 0 3.3569E-10 2 28040 112.5 104.19 1 0.8799 0.75507 0 8319500 4487000 3832500 19898 817 7521 7695 31164;31165 31165 LCNLEEGSPGSGTYTR 16 0 1 Unmodified _LCNLEEGSPGSGTYTR_ 0 0 0 R4GNH9;R4GMQ7;B1AMU7;B1AMU4;Q9Y3B2;B1AMU3 R4GNH9 R4GNH9 EXOSC1 Exosome complex component CSL4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 870.8972 2 870.896508 1739.77846 64938.95 0.31311 0.00027269 0.19518 0.00016998 0.50829 0.00044267 870.896684841688 875.901138052303 56.414 0.64918 56.414 56.082 56.731 0 251 45 8 0 0 0 0.00015217 2 27718 65.179 56.666 1 0.98268 0.81554 0 7737300 4365800 3371500 19899 817 7521 7695 31166;31167 31167 LCPVASCPDAR 11 0 1 Unmodified _LCPVASCPDAR_ 0 0 0 A0A140VJD0;Q9UFC0;H7C5N7 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.2929 2 623.289365 1244.56418 82676.55 0.29484 0.00018377 0.12413 7.7369E-05 0.41897 0.00026114 623.289328516546 628.293445712824 38.693 0.38302 38.693 38.524 38.907 0 87 29 4 0 0 0 0.032634 1 17081 37.556 33.105 1 1.1834 1.0383 0 1852600 863800 988780 19900 599 7522 7696 31168 31168 LCQIFSDLNATYR 13 0 1 Unmodified _LCQIFSDLNATYR_ 0 0 0 O15042;E7ET15 O15042 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 806.4006 2 800.89304 1599.77153 NaN NaN NaN 1.6596 0.0013291 NaN NaN NaN NaN 112.29 0.2227 112.29 112.21 112.44 0 0 0 0 0.025943 1 65228 44.847 35.659 1 NaN NaN 0 1195200 0 1195200 19901 1374 7523 7697 31169 31169 LCSDSCFSK 9 1 0 Unmodified _LCSDSCFSK_ 0 0 0 A6NHB5;Q14202;A6NHN7;A8K3Z7;A6NL54 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.2286 2 552.228442 1102.44233 83109.31 0.21529 0.00011889 -0.09353 -5.165E-05 0.12176 6.7238E-05 552.228132654796 556.235552659884 24.833 0.32586 24.833 24.668 24.994 0 58 17 5 0 0 0 0.007781 1 10510 61.679 57.566 1 0.66953 0.66909 0 9751200 5426700 4324500 19902 681 7524 7698 31170 31170 LCSDSCFSK 9 1 0 Unmodified _LCSDSCFSK_ 0 0 0 A6NHB5;Q14202;A6NHN7;A8K3Z7;A6NL54 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.2352 2 552.228442 1102.44233 82877.61 0.53907 0.00029769 0.047454 2.6205E-05 0.58652 0.00032389 552.228249440763 556.235462902634 24.59 0.31714 24.59 24.439 24.756 0 53 15 5 0 0 0 0.024033 1 10284 48.423 48.423 1 0.56068 0.58017 0 9760100 5623800 4136300 19903 681 7524 7698 31171 31171 LCSGVLGTVVHGK 13 1 0 Unmodified _LCSGVLGTVVHGK_ 0 0 0 Q9Y6C9;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.5826 3 442.911462 1325.71256 91190.57 -0.011308 -5.0084E-06 -0.47866 -0.000212 -0.48996 -0.00021701 442.91124344245 445.582641260557 59.268 0.43246 59.268 59.044 59.476 0 132 32 6 0 0 0 0.0019241 1 33707 32.43 30.956 1 1.159 1.254 0 43196000 17835000 25361000 19904 2152 7525 7699 31172 31172 LCSGVLGTVVHGK 13 1 0 Unmodified _LCSGVLGTVVHGK_ 0 0 0 Q9Y6C9;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 445.5829 3 442.911462 1325.71256 90378.74 -0.0025646 -1.1359E-06 -0.32189 -0.00014257 -0.32446 -0.00014371 442.911213654368 445.582744594023 57.959 0.42624 57.959 57.745 58.171 0 143 34 5 0 0 0 0.0003768 1 33582 46.481 44.038 1 1.3464 1.3694 0 30341000 12097000 18244000 19905 2152 7525 7699 31173 31173 LCSSAETLESHPDIGK 16 1 0 Unmodified _LCSSAETLESHPDIGK_ 0 0 0 O96028;Q05CW4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.9447 3 581.945448 1742.81451 79890.52 0.56533 0.00032899 -0.78844 -0.00045883 -0.22311 -0.00012984 581.94526669046 584.616679727187 55.052 0.61998 55.052 54.822 55.442 -3.8147E-06 175 41 7 0 0 0 0.0068795 1 27514 24.429 24.429 1 1.8632 1.4758 0 6312100 2871700 3440400 19906 1435 7526 7700 31174 31174 LCSSAETLESHPDIGK 16 1 0 Unmodified _LCSSAETLESHPDIGK_ 0 0 0 O96028;Q05CW4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.6171 3 581.945448 1742.81451 79289.3 0.37915 0.00022065 -0.32139 -0.00018703 0.057762 3.3615E-05 581.945550310295 584.616892604153 55.615 0.64224 55.615 55.336 55.978 3.8147E-06 167 36 9 0 0 0 4.6641E-05 2 27322 65.943 49.804 1 1.438 1.1719 0 6627900 3017100 3610800 19907 1435 7526 7700 31175;31176 31176 LCYDAFTENMAGENQLLER 19 0 1 Oxidation (M) _LCYDAFTENM(ox)AGENQLLER_ LCYDAFTENM(1)AGENQLLER LCYDAFTENM(60.63)AGENQLLER 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1150.5132 2 1145.50937 2289.00418 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.026 1 97.026 96.526 97.526 0 0 0 0 0.00010737 1 60567 60.628 52.904 1 19908 1665 7527 7701 31177 31177 1451 LCYNYPVIQNYYTSR 15 0 1 Unmodified _LCYNYPVIQNYYTSR_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 982.4656 2 977.461818 1952.90908 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.734 1 96.734 96.234 97.234 0 0 0 0 2.761E-11 1 58968 111.63 89.097 1 19909 1945 7528 7702 31178 31178 LCYNYPVIQNYYTSR 15 0 1 Unmodified _LCYNYPVIQNYYTSR_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.4626 2 977.461818 1952.90908 65268.73 0.17732 0.00017332 0.72058 0.00070434 0.8979 0.00087767 977.963544944615 982.96776064913 96.19 0.40031 96.19 96.041 96.441 -7.6294E-06 114 36 6 0 0 0 0.00022235 3 59943 67.385 64.347 1 1.0805 1.0638 0 14513000 6297100 8216300 19910 1945 7528 7702 31179;31180;31181 31179 LCYNYPVIQNYYTSR 15 0 1 Unmodified _LCYNYPVIQNYYTSR_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 982.9683 2 977.461818 1952.90908 61297.86 0.27466 0.00026847 0.50212 0.00049081 0.77679 0.00075928 977.965538609075 982.466127002646 109.85 0.69729 109.85 109.57 110.26 0 158 36 8 0 0 0 0.00022178 1 63259 66.498 66.498 1 3.2267 2.6736 0 11155000 2581800 8572700 19911 1945 7528 7702 31182 31182 LCYNYPVIQNYYTSR 15 0 1 Unmodified _LCYNYPVIQNYYTSR_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 982.4681 2 977.461818 1952.90908 61576.94 0.35849 0.00035041 0.31729 0.00031014 0.67577 0.00066054 977.461556874732 982.466031385133 109.76 0.61798 109.76 109.51 110.13 -7.6294E-06 157 31 9 0 0 0 0.0005851 2 62282 54.343 54.343 1 3.0188 2.451 0 10064000 2259700 7804500 19912 1945 7528 7702 31183;31184 31183 LCYVGYNIEQEQK 13 1 0 Unmodified _LCYVGYNIEQEQK_ 0 0 0 B4DHK9;P61160;B4DWQ5;Q8IY98;F5H6T1 B4DHK9 B4DHK9 ACTR2 Actin-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 826.3992 2 822.39033 1642.76611 68421.73 0.63458 0.00052188 0.19146 0.00015745 0.82604 0.00067933 822.389929509822 826.39769015366 82.704 0.53993 82.704 82.388 82.928 -7.6294E-06 80 30 4 0 0 0 0.044319 1 44133 40.727 34.624 1 1.8484 1.4415 0 2116200 703520 1412600 19913 976 7529 7703 31185 31185 LDAAAPQSLEFLR 13 0 1 Unmodified _LDAAAPQSLEFLR_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.8911 2 715.885541 1429.75653 73223.76 0.87265 0.00062472 0.21202 0.00015178 1.0847 0.0007765 715.885562210108 720.889789878339 103.5 0.65788 103.5 103.11 103.77 -7.6294E-06 214 52 5 0 0 0 6.2579E-06 2 63658 104.79 85.033 1 0.95416 0.97351 0 18745000 8876500 9868800 19914 1781 7530 7704 31186;31187 31186 LDAAAPQSLEFLR 13 0 1 Unmodified _LDAAAPQSLEFLR_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.8857 2 715.885541 1429.75653 NaN NaN NaN 0.47938 0.00034318 NaN NaN NaN NaN 102.75 0.59703 102.75 102.48 103.07 0 0 0 0 0.00043717 1 64823 84.658 71.702 1 NaN NaN 0 13951000 13951000 0 19915 1781 7530 7704 31188 31188 LDAAAPQSLEFLR 13 0 1 Unmodified _LDAAAPQSLEFLR_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.8902 2 715.885541 1429.75653 72296.37 1.057 0.00075671 -0.06469 -4.631E-05 0.99234 0.0007104 715.885396103216 720.889731164973 115.3 0.6321 115.3 114.99 115.62 0 148 30 8 0 0 0 2.3253E-13 2 67532 128.01 102.08 1 1.2706 1.0915 0 7992400 3724000 4268400 19916 1781 7530 7704 31189;31190 31190 LDAAAPQSLEFLR 13 0 1 Unmodified _LDAAAPQSLEFLR_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.8903 2 715.885541 1429.75653 72069.55 0.77823 0.00055712 0.18611 0.00013324 0.96434 0.00069036 715.885634657327 720.889857110567 115.19 0.65417 115.19 114.87 115.52 0 149 31 8 0 0 0 0.00010772 2 66473 91.937 72.176 1 1.3152 1.085 0 8269700 3744600 4525200 19917 1781 7530 7704 31191;31192 31192 LDADLLVPASVK 12 1 0 Unmodified _LDADLLVPASVK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.8685 2 620.861003 1239.70745 76547.41 0.90352 0.00056096 -0.070666 -4.3874E-05 0.83286 0.00051709 620.860964004526 624.868036438902 100.95 1.178 100.95 100.53 101.71 0 542 87 9 0 0 0 5.2975E-08 2 61818 113.47 85.73 1 0.79727 0.92839 0 260820000 147610000 113220000 19918 1942 7531 7705 31193;31194 31194 LDADLLVPASVK 12 1 0 Unmodified _LDADLLVPASVK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.8687 2 620.861003 1239.70745 76848.39 0.56228 0.0003491 0.068213 4.2351E-05 0.6305 0.00039145 620.8611015569 624.868075405627 100.29 1.0982 100.29 99.862 100.96 0 527 88 8 0 0 0 4.6886E-08 2 62856 114.83 87.092 1 0.80594 0.94312 0 300380000 162650000 137730000 19919 1942 7531 7705 31195;31196 31196 LDADLLVPASVK 12 1 0 Unmodified _LDADLLVPASVK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.8682 2 620.861003 1239.70745 76670.07 0.95139 0.00059068 0.12677 7.8706E-05 1.0782 0.00066939 620.861131103748 624.868091385201 113.36 1.5069 113.36 113.04 114.55 7.6294E-06 267 70 10 0 0 0 2.3097E-05 2 65916 101.95 71.7 1 1.422 1.2036 0 58780000 22449000 36331000 19920 1942 7531 7705 31197;31198 31197 LDADLLVPASVK 12 1 0 Unmodified _LDADLLVPASVK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.8693 2 620.861003 1239.70745 76164.22 0.60258 0.00037412 -0.10558 -6.5553E-05 0.497 0.00030857 620.861121674171 624.868110860032 113.25 1.3796 113.25 112.89 114.27 -7.6294E-06 341 65 8 0 0 0 2.3097E-05 3 64903 101.95 74.212 1 1.4955 1.2606 0 54073000 22492000 31581000 19921 1942 7531 7705 31199;31200;31201 31199 LDADPSLQR 9 0 1 Unmodified _LDADPSLQR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.7654 2 507.764363 1013.51417 84939.05 0.55808 0.00028337 -0.0062801 -3.1888E-06 0.5518 0.00028018 507.764327546461 512.768416578097 37.113 0.73102 37.113 36.785 37.516 0 320 64 7 0 0 0 0.0018938 3 18818 79.474 66.692 1 0.97853 1.1201 0 130020000 64280000 65738000 + 19922 1171;1158 7532 7706 31202;31203;31204 31204 LDADPSLQR 9 0 1 Unmodified _LDADPSLQR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.7644 2 507.764363 1013.51417 83823.72 0.652 0.00033106 -0.19084 -9.6899E-05 0.46116 0.00023416 507.764151669263 512.768264178502 36.393 0.82234 36.393 35.965 36.787 0 315 67 8 0 0 0 7.17E-06 1 18593 130.28 105.34 1 0.93545 1.0718 0 171730000 84360000 87369000 + 19923 1171;1158 7532 7706 31205 31205 LDADPSLQR 9 0 1 Unmodified _LDADPSLQR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.7646 2 507.764363 1013.51417 84991.41 0.34198 0.00017365 -0.12803 -6.5011E-05 0.21395 0.00010864 507.764334915649 512.768327179063 42.281 0.71398 42.281 41.896 42.61 0 267 55 6 0 0 0 0.0096208 1 19754 60.019 49.788 1 0.98665 0.836 0 9344000 4910000 4433900 + 19924 1171;1158 7532 7706 31206 31206 LDADPSLQR 9 0 1 Unmodified _LDADPSLQR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.7686 2 507.764363 1013.51417 NaN NaN NaN -0.10304 -5.2319E-05 NaN NaN NaN NaN 42.468 0.72659 42.468 42.095 42.822 0 0 0 0 0.0025812 1 19320 80.219 59.594 1 NaN NaN 0 5124700 0 5124700 + 19925 1171;1158 7532 7706 31207 31207 LDAEDVIGSR 10 0 1 Unmodified _LDAEDVIGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.7801 2 537.774928 1073.5353 82686.55 0.47648 0.00025624 0.042576 2.2896E-05 0.51905 0.00027913 537.774881752905 542.778997130991 65.343 1.7719 65.343 64.221 65.993 0 528 159 8 0 0 0 2.2744E-09 2 37599 128.27 72.739 1 1.6631 1.8841 0 106270000 38431000 67837000 19926 1569 7533 7707 31208;31209 31209 LDAEDVIGSR 10 0 1 Unmodified _LDAEDVIGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.7801 2 537.774928 1073.5353 82472.02 0.48511 0.00026088 -0.1012 -5.4425E-05 0.38391 0.00020646 537.774810161874 542.778999652188 64.342 1.0112 64.342 63.828 64.839 0 471 93 8 0 0 0 3.0589E-08 2 37735 119.75 36.775 1 1.627 1.8525 0 109210000 41467000 67741000 19927 1569 7533 7707 31210;31211 31211 LDAEDVIGSR 10 0 1 Unmodified _LDAEDVIGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.7794 2 537.774928 1073.5353 82785.28 0.68006 0.00036572 -0.10175 -5.4719E-05 0.57831 0.000311 537.774837033147 542.778985738295 74.799 1.1546 74.799 74.341 75.496 0 350 82 7 0 0 0 0.013721 2 39578 49.35 22.609 1 2.709 2.2159 0 13543000 3717000 9826500 19928 1569 7533 7707 31212;31213 31212 LDAEDVIGSR 10 0 1 Unmodified _LDAEDVIGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.7792 2 537.774928 1073.5353 81753.24 0.43419 0.0002335 0.13911 7.4812E-05 0.57331 0.00030831 537.774938656836 542.779055623279 75.263 1.0113 75.263 74.805 75.816 -7.6294E-06 341 72 8 0 0 0 0.011972 2 39083 51.268 21.013 1 2.7665 2.24 0 11757000 2867300 8889500 19929 1569 7533 7707 31214;31215 31214 LDAEPRPPPTQEAA 14 0 1 Unmodified _LDAEPRPPPTQEAA_ 0 0 1 Q6IBR2;K7ER00;Q9Y285 Q6IBR2 Q6IBR2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.3764 2 746.375537 1490.73652 74175.05 0.3134 0.00023391 -0.014884 -1.1109E-05 0.29852 0.00022281 746.375284039459 751.37980068279 45.745 0.59051 45.745 45.41 46 0 98 51 4 0 0 0 0.00082864 1 24644 76.143 59.918 1 0.73748 0.77072 0 13209000 7367900 5841100 19930 1347 7534 7708 31216 31216 LDAEPRPPPTQEAA 14 0 1 Unmodified _LDAEPRPPPTQEAA_ 0 0 1 Q6IBR2;K7ER00;Q9Y285 Q6IBR2 Q6IBR2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.8176 2 746.375537 1490.73652 73537.02 0.79879 0.00059619 0.50535 0.00037718 1.3041 0.00097337 746.37611750719 751.379988775714 44.784 0.46168 44.784 44.494 44.956 0 94 34 4 0 0 0 0.014059 1 24391 54.784 38.21 1 0.51725 0.5145 0 11809000 6134900 5673900 19931 1347 7534 7708 31217 31217 LDAFVEGVVK 10 1 0 Unmodified _LDAFVEGVVK_ 0 0 0 A0A024R9I0;P21283 A0A024R9I0 A0A024R9I0 ATP6V1C1 V-type proton ATPase subunit C 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.8103 2 538.802957 1075.59136 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.48 1 84.48 83.98 84.98 0 0 0 0 0.044784 1 50645 45.368 12.105 1 19932 279 7535 7709 31218 31218 LDALSNFHFIPKPPVPEIK 19 2 0 Unmodified _LDALSNFHFIPKPPVPEIK_ 0 0 1 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.4064 3 721.40513 2161.19356 73372.34 0.70101 0.00050571 0.53126 0.00038325 1.2323 0.00088897 721.40554430738 727.082302137376 114.56 1.0229 114.56 114.19 115.21 0 348 69 7 0 0 0 0.00014331 1 72545 43.955 43.955 1 0.91358 1.0804 0 15601000 9191100 6410200 19933 924 7536 7710 31219 31219 LDALSNFHFIPKPPVPEIK 19 2 0 Unmodified _LDALSNFHFIPKPPVPEIK_ 0 0 1 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.5566 4 541.305667 2161.19356 81536.42 0.67669 0.00036629 -0.29513 -0.00015975 0.38156 0.00020654 541.55624346415 545.563303550249 114.83 1.2233 114.83 114.08 115.3 0 476 83 9 0 0 0 1.0521E-05 4 72617 50.938 50.938 1 1.0329 1.2196 0 38201000 16976000 21225000 19934 924 7536 7710 31220;31221;31222;31223 31221 LDALSNFHFIPKPPVPEIK 19 2 0 Unmodified _LDALSNFHFIPKPPVPEIK_ 0 0 1 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.3058 4 541.305667 2161.19356 81447.1 0.57121 0.0003092 -0.28454 -0.00015402 0.28668 0.00015518 541.556228464147 545.563331291669 113.44 1.2185 113.44 112.75 113.97 0 557 85 10 0 0 0 5.6564E-06 3 73142 61.102 61.102 1 1.017 1.176 0 36936000 16597000 20338000 19935 924 7536 7710 31224;31225;31226 31224 LDALSNFHFIPKPPVPEIK 19 2 0 Unmodified _LDALSNFHFIPKPPVPEIK_ 0 0 1 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.7396 3 721.40513 2161.19356 73494.35 0.65466 0.00047227 -0.059292 -4.2773E-05 0.59537 0.0004295 721.740044031333 727.415662142258 113.48 0.98891 113.48 112.91 113.9 7.6294E-06 347 69 7 0 0 0 1.7778E-05 1 73731 51.524 51.524 1 1.3957 1.6036 0 23386000 8740400 14645000 19936 924 7536 7710 31227 31227 LDALSNFHFIPKPPVPEIK 19 2 0 Unmodified _LDALSNFHFIPKPPVPEIK_ 0 0 1 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.5559 4 541.305667 2161.19356 80959.49 0.91595 0.00049581 -0.33808 -0.000183 0.57787 0.00031281 541.556272184798 545.563259582073 122.88 0.85033 122.88 122.61 123.46 0 267 38 11 0 0 0 6.1675E-06 2 73264 60.034 60.034 1 1.2381 1.0521 0 38386000 16689000 21697000 19937 924 7536 7710 31228;31229 31228 LDALSNFHFIPKPPVPEIK 19 2 0 Unmodified _LDALSNFHFIPKPPVPEIK_ 0 0 1 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.7488 3 721.40513 2161.19356 71078.39 1.0062 0.00072591 0.054388 3.9236E-05 1.0606 0.00076514 721.739479722732 727.082292629444 122.88 0.49895 122.88 122.65 123.15 -7.6294E-06 160 23 10 0 0 0 2.3594E-06 2 73301 80.238 80.238 1 1.2201 1.0426 0 13001000 5575800 7424900 19938 924 7536 7710 31230;31231 31230 LDALSNFHFIPKPPVPEIK 19 2 0 Unmodified _LDALSNFHFIPKPPVPEIK_ 0 0 1 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.5643 4 541.305667 2161.19356 80696.38 0.87249 0.00047228 -0.38342 -0.00020754 0.48907 0.00026474 541.556162724501 545.563266267883 122.68 0.83176 122.68 122.36 123.19 0 269 40 12 0 0 0 3.8668E-06 2 72214 67.995 67.995 1 1.1563 0.98289 0 30635000 11198000 19437000 19939 924 7536 7710 31232;31233 31232 LDALSNFHFIPKPPVPEIK 19 2 0 Unmodified _LDALSNFHFIPKPPVPEIK_ 0 0 1 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.0836 3 721.40513 2161.19356 70745.27 0.98665 0.00071178 -0.0080396 -5.7998E-06 0.97861 0.00070598 721.739308896911 727.082183518749 122.68 0.61121 122.68 122.46 123.07 7.6294E-06 171 29 9 0 0 0 7.1757E-06 2 72248 66.779 66.779 1 1.155 0.9765 0 12074000 5361800 6712000 19940 924 7536 7710 31234;31235 31234 LDDAIEDCTNAVK 13 1 0 Unmodified _LDDAIEDCTNAVK_ 0 0 0 B4DKK3;B7Z9W6;Q59EH7;Q99615;A8K4T2;K7EJ24 B4DKK3 B4DKK3 DNAJC7 DnaJ homolog subfamily C member 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.3452 2 732.337763 1462.66097 71769.32 0.87197 0.00063857 -0.012692 -9.2947E-06 0.85927 0.00062928 732.337049654819 736.344894342474 38.333 0.33729 38.333 38.199 38.536 0 58 27 4 0 0 0 0.027152 1 19604 34.206 10.833 1 1.8645 1.9253 0 10996000 2603400 8392600 19941 990 7537 7711 31236 31236 LDDAIEDCTNAVK 13 1 0 Unmodified _LDDAIEDCTNAVK_ 0 0 0 B4DKK3;B7Z9W6;Q59EH7;Q99615;A8K4T2;K7EJ24 B4DKK3 B4DKK3 DNAJC7 DnaJ homolog subfamily C member 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.3448 2 732.337763 1462.66097 71030.01 0.50416 0.00036922 -0.36683 -0.00026864 0.13733 0.00010057 732.838223276923 736.345249796553 36.797 0.32452 36.797 36.599 36.924 0 77 21 5 0 0 0 0.014525 1 18901 37.065 12.721 1 2.1699 2.166 0 14429000 4415000 10014000 19942 990 7537 7711 31237 31237 LDDDGLPFIGAK 12 1 0 Unmodified _LDDDGLPFIGAK_ 0 0 0 Q9H6S8;Q6DKI9;Q9BSR4;B7Z1W6;Q9H9Y6;H7C0D9 Q9H6S8 Q9H6S8 POLR1B DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3094 2 630.82716 1259.63977 79061.5 0.66866 0.00042181 1.0981 0.0006927 1.7667 0.0011145 630.827126586413 635.337835829198 103.39 0.56574 103.39 103.09 103.65 0 113 45 4 0 0 0 0.035127 1 65450 55.567 36.787 1 0.99695 1.0075 0 8582700 4526200 4056500 19943 1085 7538 7712 31238 31238 LDDDSDSPSFFEEKPEEPVVLALDPK 26 2 0 Unmodified _LDDDSDSPSFFEEKPEEPVVLALDPK_ 0 0 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 973.7997 3 973.465837 2917.37568 62353.02 0.64963 0.00063239 0.18294 0.00017809 0.83257 0.00081048 973.800247393036 979.143200502557 117.16 0.46327 117.16 116.96 117.42 0 161 34 6 0 0 0 3.9369E-06 1 74894 41.491 41.491 1 0.82347 0.98367 0 18804000 9314000 9489500 19944 878 7539 7713 31239 31239 LDDDSDSPSFFEEKPEEPVVLALDPK 26 2 0 Unmodified _LDDDSDSPSFFEEKPEEPVVLALDPK_ 0 0 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 974.1354 3 973.465837 2917.37568 62438.04 0.26565 0.0002586 0.35939 0.00034985 0.62504 0.00060846 973.800155923325 979.143641405586 116.75 0.52208 116.75 116.52 117.04 0 130 31 7 0 0 0 5.4685E-06 1 76416 38.357 38.357 1 0.89524 1.0239 0 16963000 8593000 8370400 19945 878 7539 7713 31240 31240 LDDHALTGASDSR 13 0 1 Unmodified _LDDHALTGASDSR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3262 2 679.320762 1356.62697 73082.78 0.53251 0.00036175 0.3402 0.0002311 0.87271 0.00059285 679.320806850556 684.325022905778 28.378 0.31527 28.378 28.183 28.498 -1.9073E-06 98 21 7 0 0 0 1.2955E-23 2 13282 181.31 156.54 1 0.91449 1.0218 0 86752000 49275000 37477000 19946 1698 7540 7714 31241;31242 31241 LDDHALTGASDSR 13 0 1 Unmodified _LDDHALTGASDSR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.2157 3 453.216267 1356.62697 89132.38 0.10618 4.8124E-05 -0.82634 -0.00037451 -0.72016 -0.00032639 453.215816410179 456.552041648459 28.348 0.41938 28.348 28.17 28.589 1.9073E-06 162 28 9 0 0 0 2.7659E-09 2 13303 116.12 90.739 1 0.94882 1.0988 0 167430000 86604000 80826000 19947 1698 7540 7714 31243;31244 31244 LDDHALTGASDSR 13 0 1 Unmodified _LDDHALTGASDSR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.216 3 453.216267 1356.62697 88466.18 -0.18255 -8.2734E-05 -0.40932 -0.00018551 -0.59187 -0.00026825 453.21599586754 456.552215102781 27.658 0.46972 27.658 27.401 27.871 1.9073E-06 125 24 10 0 0 0 1.193E-31 2 12915 174.89 154.43 1 0.85116 0.98844 0 349630000 180820000 168820000 19948 1698 7540 7714 31245;31246 31246 LDDHALTGASDSR 13 0 1 Unmodified _LDDHALTGASDSR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3247 2 679.320762 1356.62697 73536.86 0.23802 0.00016169 0.21958 0.00014917 0.45761 0.00031086 679.320903464864 684.325075081983 27.659 0.29372 27.659 27.524 27.818 0 80 15 8 0 0 0 6.5491E-49 2 12902 192.95 174.63 1 0.88072 1.0101 0 179670000 90951000 88717000 19949 1698 7540 7714 31247;31248 31248 LDDHALTGASDSR 13 0 1 Unmodified _LDDHALTGASDSR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 456.5523 3 453.216267 1356.62697 88181.23 -0.0341 -1.5455E-05 0.074731 3.3869E-05 0.04063 1.8414E-05 453.216310688494 456.552357587131 32.257 0.55225 32.257 32.021 32.573 3.8147E-06 143 27 10 0 0 0 0.0020815 2 13827 35.037 32.25 1 1.2056 1.0322 0 40396000 18878000 21518000 19950 1698 7540 7714 31249;31250 31250 LDDHALTGASDSR 13 0 1 Unmodified _LDDHALTGASDSR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.3254 2 679.320762 1356.62697 73698.23 0.36495 0.00024792 0.27906 0.00018957 0.64401 0.00043749 679.320901737597 684.32498830877 32.25 0.37521 32.25 32.055 32.43 0 95 16 9 0 0 0 8.9093E-06 2 13815 101.45 88.489 1 1.2894 1.0638 0 11563000 4849300 6713600 19951 1698 7540 7714 31251;31252 31252 LDDHALTGASDSR 13 0 1 Unmodified _LDDHALTGASDSR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 453.2163 3 453.216267 1356.62697 88903.33 0.028182 1.2772E-05 0.34303 0.00015546 0.37121 0.00016824 453.216434106656 456.552501257194 32.442 0.62109 32.442 32.2 32.821 0 167 30 10 0 0 0 0.00010789 2 13455 63.185 55.461 1 1.2634 1.102 0 34221000 15381000 18839000 19952 1698 7540 7714 31253;31254 31253 LDDHALTGASDSR 13 0 1 Unmodified _LDDHALTGASDSR_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.3254 2 679.320762 1356.62697 73825.36 0.58634 0.00039831 0.15447 0.00010493 0.74081 0.00050325 679.320837370396 684.324982307401 32.437 0.3426 32.437 32.254 32.596 0 104 17 9 0 0 0 0.00015563 2 13476 85.845 67.533 1 1.2009 0.97941 0 9477300 4707600 4769700 19953 1698 7540 7714 31255;31256 31256 LDDIFEPVLIPEPK 14 1 0 Unmodified _LDDIFEPVLIPEPK_ 0 0 0 Q14008;Q8IYN5;H0YCF6;H0YEK7 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.4468 2 812.945264 1623.87598 69131.89 0.74253 0.00060364 -0.40974 -0.0003331 0.33279 0.00027054 813.446030332855 816.952332202241 124.16 0.46099 124.16 123.92 124.38 -7.6294E-06 146 31 7 0 0 0 0.0025157 2 80611 60.434 60.434 1 1.006 1.0096 0 9884200 4816600 5067600 19954 1725 7541 7715 31257;31258 31258 LDDIFEPVLIPEPK 14 1 0 Unmodified _LDDIFEPVLIPEPK_ 0 0 0 Q14008;Q8IYN5;H0YCF6;H0YEK7 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.9451 2 812.945264 1623.87598 69140.93 0.85085 0.0006917 -0.3243 -0.00026364 0.52655 0.00042806 812.945829982353 816.952416026385 123.75 0.4902 123.75 123.53 124.02 0 149 34 7 0 0 0 0.00020917 2 82227 83 83 1 1.0833 1.1117 0 9465500 4519500 4946000 19955 1725 7541 7715 31259;31260 31260 LDDIHPFYADLMNILYDK 18 1 0 Oxidation (M) _LDDIHPFYADLM(ox)NILYDK_ LDDIHPFYADLM(1)NILYDK LDDIHPFYADLM(88.13)NILYDK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.032 3 738.025879 2211.05581 70516.33 0.81414 0.00060086 -0.022302 -1.6459E-05 0.79184 0.0005844 738.360077120139 741.031668737898 125.04 1.1265 125.04 124.51 125.64 7.6294E-06 451 75 9 0 0 0 2.9113E-08 2 81217 88.133 88.133 1 2.1449 2.1087 0 23556000 7708200 15848000 19956 1183 7542 7716 31261;31262 31261 897 LDDIHPFYADLMNILYDK 18 1 0 Oxidation (M) _LDDIHPFYADLM(ox)NILYDK_ LDDIHPFYADLM(1)NILYDK LDDIHPFYADLM(75.24)NILYDK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.6981 3 738.025879 2211.05581 70721.64 0.94379 0.00069654 -0.18239 -0.00013461 0.7614 0.00056193 738.360178134455 741.031709499211 123.93 0.55563 123.93 123.67 124.22 0 201 37 7 0 0 0 4.1278E-06 1 82300 75.239 75.239 1 2.27 2.426 0 21074000 5632700 15441000 19957 1183 7542 7716 31263 31263 897 LDDIHPFYADLMNILYDK 18 1 0 Oxidation (M) _LDDIHPFYADLM(ox)NILYDK_ LDDIHPFYADLM(1)NILYDK LDDIHPFYADLM(84.65)NILYDK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.0266 3 738.025879 2211.05581 70721.65 1.1413 0.00084231 -0.11552 -8.5257E-05 1.0258 0.00075705 738.025631810798 741.031654246528 124.5 1.1875 124.5 123.84 125.03 7.6294E-06 410 80 9 0 0 0 9.6374E-07 2 82934 84.653 84.653 1 1.9891 2.0126 0 28964000 12134000 16829000 19958 1183 7542 7716 31264;31265 31265 897 LDDIHPFYADLMNILYDK 18 1 0 Oxidation (M) _LDDIHPFYADLM(ox)NILYDK_ LDDIHPFYADLM(1)NILYDK LDDIHPFYADLM(40.97)NILYDK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.6979 3 738.025879 2211.05581 71055.69 0.95065 0.0007016 -0.16439 -0.00012132 0.78626 0.00058028 738.360379156561 741.031634266374 134.51 0.25015 134.51 134.41 134.66 0 40 8 10 0 0 0 0.00019665 1 82170 40.968 40.968 1 1.078 0.87483 0 26566000 12848000 13718000 19959 1183 7542 7716 31266 31266 897 LDDIHPFYADLMNILYDK 18 1 0 Unmodified _LDDIHPFYADLMNILYDK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.366 3 732.694241 2195.06089 70773.84 0.24752 0.00018136 0.468 0.0003429 0.71552 0.00052426 732.694898220707 735.365869358081 133.39 0.14124 133.39 133.3 133.44 0 23 3 8 0 0 0 0.0016433 1 89629 33.308 30.117 1 0.95144 1.0543 0 46850000 23493000 23357000 19960 1183 7542 7717 31267 31267 LDDLALLEDLEK 12 1 0 Unmodified _LDDLALLEDLEK_ 0 0 0 B4DZQ5;A0A024QZY5;Q13523 B4DZQ5 B4DZQ5 PRPF4B Serine/threonine-protein kinase PRP4 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.8718 2 693.871765 1385.72898 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.4 1 122.4 121.9 122.9 0 0 0 0 0.00080606 1 79242 75.695 21.088 1 19961 33 7543 7718 31268 31268 LDDLALLEDLEK 12 1 0 Unmodified _LDDLALLEDLEK_ 0 0 0 B4DZQ5;A0A024QZY5;Q13523 B4DZQ5 B4DZQ5 PRPF4B Serine/threonine-protein kinase PRP4 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.8719 2 693.871765 1385.72898 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.43 1 122.43 121.93 122.93 0 0 0 0 0.0012228 1 79262 70.488 35.796 1 19962 33 7543 7718 31269 31269 LDDLALLEDLEK 12 1 0 Unmodified _LDDLALLEDLEK_ 0 0 0 B4DZQ5;A0A024QZY5;Q13523 B4DZQ5 B4DZQ5 PRPF4B Serine/threonine-protein kinase PRP4 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8792 2 693.871765 1385.72898 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.95 1 121.95 121.45 122.45 7.6294E-06 0 0 0 9.2109E-05 1 80819 90.685 63.57 1 19963 33 7543 7718 31270 31270 LDDLFLK 7 1 0 Unmodified _LDDLFLK_ 0 0 0 E5KNY5;P42704 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.254 2 432.247286 862.48002 93418.83 0.18108 7.8271E-05 0.25123 0.00010859 0.4323 0.00018686 432.247172606039 436.254253118152 86.576 0.62963 86.576 86.259 86.889 0 177 46 6 0 0 0 0.030326 1 52073 68.915 19.556 1 2.7793 3.0133 0 44688000 11956000 32731000 19964 1207 7544 7719 31271 31271 LDDLFLK 7 1 0 Unmodified _LDDLFLK_ 0 0 0 E5KNY5;P42704 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.2543 2 432.247286 862.48002 93084.07 0.24752 0.00010699 -0.01192 -5.1523E-06 0.2356 0.00010184 432.247205243443 436.25426646914 85.634 0.61646 85.634 85.276 85.892 0 182 46 6 0 0 0 0.010624 1 52639 110.63 19.648 1 2.6012 2.9004 0 52045000 16399000 35645000 19965 1207 7544 7719 31272 31272 LDDLSVLDLSHNQLTECPR 19 0 1 Unmodified _LDDLSVLDLSHNQLTECPR_ 0 0 0 B4DIX0;Q13045;Q59H95;K7EP37;K7EP27;J3QQQ2;J3KS54 B4DIX0 B4DIX0 FLII Protein flightless-1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.3719 3 742.367075 2224.0794 NaN NaN NaN 2.5321 0.0018797 NaN NaN NaN NaN 104.39 0.24348 104.39 104.26 104.5 0 0 0 0 0.00015547 1 66093 54.764 37.616 1 NaN NaN 0 3997000 0 3997000 19966 984 7545 7720 31273 31273 LDDLVSTGK 9 1 0 Unmodified _LDDLVSTGK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.2565 2 474.25584 946.497126 NaN NaN NaN 0.095551 4.5316E-05 NaN NaN NaN NaN 41.233 0.51787 41.233 40.956 41.474 3.8147E-06 0 0 0 0.00095118 1 21716 88.819 34.614 1 NaN NaN 0 27866000 27866000 0 19967 452 7546 7721 31274 31274 LDDLVSTGK 9 1 0 Unmodified _LDDLVSTGK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.2634 2 474.25584 946.497126 87756.85 0.20498 9.7213E-05 0.18144 8.6047E-05 0.38641 0.00018326 474.256001015053 478.262766822793 40.259 0.80383 40.259 39.993 40.796 0 270 65 7 0 0 0 0.013598 1 21399 56.432 32.277 1 1.0342 1.1744 0 142070000 63904000 78164000 19968 452 7546 7721 31275 31275 LDDLYQQK 8 1 0 Unmodified _LDDLYQQK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.7606 2 511.761289 1021.50803 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.297 1 34.297 33.797 34.797 0 0 0 0 0.0045728 1 17145 89.55 46.303 1 19969 696 7547 7722 31276 31276 LDDLYQQK 8 1 0 Unmodified _LDDLYQQK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.761 2 511.761289 1021.50803 NaN NaN NaN 0.73074 0.00037396 NaN NaN NaN NaN 39.219 0.56681 39.219 38.874 39.441 0 0 0 0 0.030786 1 17851 58.782 38.157 1 NaN NaN 0 1646700 1646700 0 19970 696 7547 7722 31277 31277 LDDTYSFQVINK 12 1 0 Unmodified _LDDTYSFQVINK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.8697 2 721.861731 1441.70891 70547.54 0.86453 0.00062407 -0.076164 -5.498E-05 0.78837 0.00056909 721.861592525729 725.868537712307 84.968 0.85184 84.968 84.489 85.341 0 348 66 7 0 0 0 2.702E-29 2 50876 208.75 208.75 1 1.0428 1.1759 0 112500000 54311000 58188000 19971 897 7548 7723 31278;31279 31279 LDDTYSFQVINK 12 1 0 Unmodified _LDDTYSFQVINK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.8624 2 721.861731 1441.70891 71948.75 0.95872 0.00069206 0.26786 0.00019336 1.2266 0.00088542 721.861719221505 725.868967815603 84.015 0.76237 84.015 83.704 84.467 0 315 62 7 0 0 0 1.6192E-05 2 51504 123.63 112.13 1 0.98933 1.1102 0 115020000 50998000 64021000 19972 897 7548 7723 31280;31281 31281 LDDTYSFQVINK 12 1 0 Unmodified _LDDTYSFQVINK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.8702 2 721.861731 1441.70891 70822.32 0.9926 0.00071652 -0.088385 -6.3801E-05 0.90422 0.00065272 721.861649369547 725.868620623123 96.949 0.94043 96.949 96.707 97.647 0 276 48 8 0 0 0 0.00014745 2 54402 109.42 96.463 1 1.1746 0.95302 0 26331000 12108000 14223000 19973 897 7548 7723 31282;31283 31282 LDDTYSFQVINK 12 1 0 Unmodified _LDDTYSFQVINK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.8701 2 721.861731 1441.70891 70501.84 0.50592 0.0003652 0.31458 0.00022708 0.8205 0.00059229 721.861884951621 725.868882597943 96.915 0.87984 96.915 96.586 97.466 0 269 41 10 0 0 0 2.4308E-05 3 53553 118.4 118.4 1 1.2088 0.96993 0 18488000 7939600 10549000 19974 897 7548 7723 31284;31285;31286 31285 LDEILK 6 1 0 Unmodified _LDEILK_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 369.7275 2 365.720904 729.427256 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.502 1 45.502 45.002 46.002 0 0 0 0 0.040144 1 24981 89.703 0 1 19975 340 7549 7724 31287 31287 LDELRGQDEGK 11 1 1 Unmodified _LDELRGQDEGK_ 0 0 1 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.5534 3 420.545724 1258.61534 92791.85 0.15008 6.3118E-05 0.12881 5.4172E-05 0.2789 0.00011729 420.545759754154 426.553222076555 19.806 0.27912 19.806 19.58 19.859 1.9073E-06 48 18 6 0 0 0 0.043234 1 6291 21.039 16.281 1 0.67596 0.73772 0 9416200 5025200 4391000 19976 918 7550 7725 31288 31288 LDELRGQDEGK 11 1 1 Unmodified _LDELRGQDEGK_ 0 0 1 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.3174 2 630.314948 1258.61534 NaN NaN NaN 0.55022 0.00034681 NaN NaN NaN NaN 19.814 0.23208 19.814 19.627 19.859 0 0 0 0 2.5817E-07 1 6276 115.57 69.112 1 NaN NaN 0 7913900 7913900 0 19977 918 7550 7725 31289 31289 LDELRGQDEGK 11 1 1 Unmodified _LDELRGQDEGK_ 0 0 1 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.3141 2 630.314948 1258.61534 77381 0.38213 0.00024086 -0.26601 -0.00016767 0.11612 7.3195E-05 630.315018485552 639.326314434972 19.435 0.25558 19.435 19.252 19.507 0 34 9 6 0 0 0 8.1806E-06 1 5839 112.13 80.191 1 0.72058 0.7987 0 9094600 5508900 3585700 19978 918 7550 7725 31290 31290 LDELRGQDEGK 11 1 1 Unmodified _LDELRGQDEGK_ 0 0 1 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.3265 2 630.314948 1258.61534 75926.06 0.13215 8.3298E-05 0.24016 0.00015137 0.37231 0.00023467 630.315097165114 639.326547773372 20.78 0.29604 20.78 20.641 20.937 -1.9073E-06 46 14 5 0 0 0 0.044098 1 5606 51.268 37.498 1 0.95726 0.82578 0 2038000 933370 1104600 19979 918 7550 7725 31291 31291 LDELYGTWR 9 0 1 Unmodified _LDELYGTWR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.7881 2 576.787838 1151.56112 79145.78 0.59768 0.00034473 0.2355 0.00013584 0.83318 0.00048057 576.787863574502 581.792119398404 79.07 1.2876 79.07 78.378 79.666 0 472 116 7 0 0 0 1.4999E-05 2 46747 122.52 97.622 1 0.76604 0.88212 0 148320000 81505000 66813000 19980 1548 7551 7726 31292;31293 31293 LDELYGTWR 9 0 1 Unmodified _LDELYGTWR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.7928 2 576.787838 1151.56112 79051.34 0.58359 0.00033661 0.061512 3.5479E-05 0.6451 0.00037208 576.78779999716 581.791915057662 78.001 1.1021 78.001 77.479 78.581 -7.6294E-06 418 94 8 0 0 0 1.4255E-05 2 47101 123.16 102.21 1 0.77094 0.8774 0 112670000 57841000 54824000 19981 1548 7551 7726 31294;31295 31294 LDELYGTWR 9 0 1 Unmodified _LDELYGTWR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.7916 2 576.787838 1151.56112 80258.52 0.39912 0.00023021 0.012038 6.9431E-06 0.41116 0.00023715 576.787804002211 581.791829126524 90.207 1.0691 90.207 89.616 90.685 0 225 70 6 0 0 0 0.0013821 1 49901 86.136 76.742 1 0.91708 0.77293 0 4683000 2246300 2436700 19982 1548 7551 7726 31296 31296 LDELYGTWR 9 0 1 Unmodified _LDELYGTWR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.7913 2 576.787838 1151.56112 79666.41 0.2948 0.00017004 -0.50826 -0.00029316 -0.21346 -0.00012312 576.786834169678 581.791747837496 90.199 1.3701 90.199 89.798 91.168 -7.6294E-06 217 85 5 0 0 0 0.012314 2 49209 57.59 57.59 1 0.91933 0.81298 0 3988400 1988100 2000300 19983 1548 7551 7726 31297;31298 31298 LDETGNSLK 9 1 0 Unmodified _LDETGNSLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7513 2 488.750921 975.48729 85736.72 -0.25011 -0.00012224 0.47037 0.0002299 0.22026 0.00010765 488.751050811986 492.75833485017 23.301 0.7202 23.301 22.946 23.666 0 135 35 9 0 0 0 2.3878E-05 1 9180 114.89 60.345 1 0.75792 0.85078 0 67603000 37859000 29744000 19984 1471 7552 7727 31299 31299 LDETGVALK 9 1 0 Unmodified _LDETGVALK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2658 2 473.266207 944.517862 87715.89 -0.015503 -7.337E-06 -0.036766 -1.74E-05 -0.052269 -2.4737E-05 473.266099497742 477.27324742335 45.858 0.90417 45.858 45.449 46.353 -3.8147E-06 277 80 5 0 0 0 0.00022612 2 24666 105.57 37.146 1 0.63069 0.70723 0 65690000 42587000 23103000 19985 1679 7553 7728 31300;31301 31301 LDETGVALK 9 1 0 Unmodified _LDETGVALK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2661 2 473.266207 944.517862 87191.38 0.18766 8.8815E-05 0.065844 3.1162E-05 0.25351 0.00011998 473.26613781738 477.273257712544 44.987 0.72463 44.987 44.677 45.402 0 237 59 6 0 0 0 0.00092483 2 24550 92.439 36.429 1 0.62944 0.7065 0 76350000 45429000 30920000 19986 1679 7553 7728 31302;31303 31302 LDFHEAQQK 9 1 0 Unmodified _LDFHEAQQK_ 0 0 0 Q14966;D6W5H1;A8K583;A0A096LPH6;B4DF54;C9JWN0 Q14966 Q14966 ZNF638 Zinc finger protein 638 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.2778 2 558.277638 1114.54072 78837.92 0.37878 0.00021146 -0.17985 -0.00010041 0.19893 0.00011106 558.277316567613 562.284703991213 25 0.32811 25 24.857 25.185 0 36 12 6 0 0 0 0.0018185 1 10688 80.455 59.508 1 1.0589 1.0931 0 18348000 8843500 9504800 19987 1746 7554 7729 31304 31304 LDFLEGDQK 9 1 0 Unmodified _LDFLEGDQK_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.767 2 532.766571 1063.51859 81270.72 0.56702 0.00030209 0.25169 0.00013409 0.81871 0.00043618 532.766616480007 536.773710116439 67.645 1.5534 67.645 67.133 68.686 0 647 134 7 0 0 0 0.00033619 2 38984 101.64 73.425 1 0.96781 1.1271 0 261520000 131920000 129600000 19988 1316 7555 7730 31305;31306 31306 LDFLEGDQK 9 1 0 Unmodified _LDFLEGDQK_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.7664 2 532.766571 1063.51859 81820.87 0.54342 0.00028952 0.055286 2.9454E-05 0.59871 0.00031897 532.766533087132 536.773626591791 66.619 1.4697 66.619 66.054 67.523 0 600 121 7 0 0 0 4.7173E-05 2 39217 111.95 65.931 1 0.94867 1.1069 0 265780000 137060000 128720000 19989 1316 7555 7730 31307;31308 31308 LDFLEGDQK 9 1 0 Unmodified _LDFLEGDQK_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.7667 2 532.766571 1063.51859 82948.78 0.33092 0.0001763 0.45787 0.00024394 0.78878 0.00042024 532.766704620437 536.773813526907 76.897 1.5675 76.897 76.481 78.048 0 437 105 7 0 0 0 0.0059982 3 40922 65.305 48.529 1 0.99375 0.78926 0 19090000 10070000 9020200 19990 1316 7555 7730 31309;31310;31311 31310 LDFLEGDQK 9 1 0 Unmodified _LDFLEGDQK_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.2927 2 532.766571 1063.51859 83363.82 0.45448 0.00024213 0.3979 0.00021199 0.85239 0.00045412 532.766636161633 536.773793736946 77.253 1.7056 77.253 76.817 78.523 0 463 110 7 0 0 0 0.016855 4 40244 53.493 40.227 1 1.0076 0.80944 0 15699000 7695200 8003500 19991 1316 7555 7730 31312;31313;31314;31315 31312 LDFLGEGQFATVYK 14 1 0 Unmodified _LDFLGEGQFATVYK_ 0 0 0 D6RAD4;A0A0S2Z3F9;P50613;D6RFL0;D6RGG9;D6RI01;D6R9Z2;D6RF14;D6RIG9;A0A0D9SFW9 D6RAD4 D6RAD4 CDK7 Cyclin-dependent kinase 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.4078 2 794.406306 1586.79806 NaN NaN NaN 0.38142 0.000303 NaN NaN NaN NaN 111.9 0.24097 111.9 111.83 112.07 7.6294E-06 0 0 0 0.0082904 1 72322 53.237 37.348 1 NaN NaN 0 2982200 2982200 0 19992 547 7556 7731 31316 31316 LDFNLIR 7 0 1 Unmodified _LDFNLIR_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06;C9JLK0 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.7621 2 445.758352 889.502152 93665.8 0.39475 0.00017596 0.073311 3.2679E-05 0.46807 0.00020864 445.758480547843 450.762450918697 96.546 0.68735 96.546 96.336 97.023 0 98 58 4 0 0 0 0.031504 1 58829 67.035 27.816 1 3.5443 3.6319 0 19191000 2328100 16863000 19993 852 7557 7732 31317 31317 LDFNLIR 7 0 1 Unmodified _LDFNLIR_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06;C9JLK0 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.7625 2 445.758352 889.502152 91166.64 0.50995 0.00022731 -0.12964 -5.7786E-05 0.38031 0.00016953 445.75824798492 450.762287009623 95.923 0.71368 95.923 95.424 96.138 0 137 57 4 0 0 0 0.031504 2 59518 67.035 22.424 1 3.1938 3.1687 0 15927000 4331200 11596000 19994 852 7557 7732 31318;31319 31318 LDFNTDEEK 9 1 0 Unmodified _LDFNTDEEK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.7579 2 555.751118 1109.48768 81849.11 1.0626 0.00059056 -0.17416 -9.6792E-05 0.88847 0.00049377 555.750925572948 559.758042047521 41.337 0.48363 41.337 41.073 41.557 0 160 39 6 0 0 0 1.1812E-18 2 21777 175.38 140.55 1 0.89117 0.9699 0 48772000 24402000 24370000 19995 1563 7558 7733 31320;31321 31321 LDFNTDEEK 9 1 0 Unmodified _LDFNTDEEK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.759 2 555.751118 1109.48768 81555.85 0.60885 0.00033837 -0.21311 -0.00011844 0.39574 0.00021993 555.750859239957 559.758088587807 40.242 0.4637 40.242 40.041 40.505 0 165 39 6 0 0 0 5.8773E-08 2 21415 144.09 109.26 1 0.84549 0.95314 0 61173000 29181000 31992000 19996 1563 7558 7733 31322;31323 31323 LDFNTDEEK 9 1 0 Unmodified _LDFNTDEEK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.7581 2 555.751118 1109.48768 81186.76 0.22794 0.00012668 -0.64028 -0.00035584 -0.41234 -0.00022916 555.750484516132 559.75786695417 47.132 0.61946 47.132 46.885 47.504 0 186 50 6 0 0 0 0.00245 2 22763 74.301 48.564 1 1.0953 0.87377 0 6871900 3480500 3391500 19997 1563 7558 7733 31324;31325 31324 LDFSTGNFNVLAVR 14 0 1 Unmodified _LDFSTGNFNVLAVR_ 0 0 0 G3XAN4;Q6FHU7;Q6FHL3;A8K032;Q15629 G3XAN4 G3XAN4 TRAM1 Translocating chain-associated membrane protein;Translocating chain-associated membrane protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.4119 2 776.909547 1551.80454 70308.55 0.93335 0.00072513 -0.32206 -0.00025021 0.6113 0.00047492 776.909719827412 781.913513808305 116.93 0.4222 116.93 116.73 117.15 0 127 29 6 0 0 0 0.00018967 1 74759 70.808 70.808 1 0.71281 0.71732 0 9340900 5478700 3862100 19998 697 7559 7734 31326 31326 LDFSTGNFNVLAVR 14 0 1 Unmodified _LDFSTGNFNVLAVR_ 0 0 0 G3XAN4;Q6FHU7;Q6FHL3;A8K032;Q15629 G3XAN4 G3XAN4 TRAM1 Translocating chain-associated membrane protein;Translocating chain-associated membrane protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.4113 2 776.909547 1551.80454 NaN NaN NaN 0.2269 0.00017628 NaN NaN NaN NaN 116.48 0.41876 116.48 116.24 116.66 0 0 0 0 0.0031546 1 76186 85.963 76.531 1 NaN NaN 0 8957600 8957600 0 19999 697 7559 7734 31327 31327 LDFSTGNFNVLAVR 14 0 1 Unmodified _LDFSTGNFNVLAVR_ 0 0 0 G3XAN4;Q6FHU7;Q6FHL3;A8K032;Q15629 G3XAN4 G3XAN4 TRAM1 Translocating chain-associated membrane protein;Translocating chain-associated membrane protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.9148 2 776.909547 1551.80454 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.45 1 116.45 115.95 116.95 0 0 0 0 0.00034624 1 76194 85.958 62.814 1 20000 697 7559 7734 31328 31328 LDFSTGNFNVLAVR 14 0 1 Unmodified _LDFSTGNFNVLAVR_ 0 0 0 G3XAN4;Q6FHU7;Q6FHL3;A8K032;Q15629 G3XAN4 G3XAN4 TRAM1 Translocating chain-associated membrane protein;Translocating chain-associated membrane protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 781.9145 2 776.909547 1551.80454 69106.46 1.1633 0.00090378 0.17887 0.00013897 1.3422 0.0010428 776.909817744347 781.91392279824 128.67 0.4838 128.67 128.47 128.95 -1.5259E-05 86 21 6 0 0 0 0.00013034 2 77671 80.102 80.102 1 0.7989 0.68668 0 6565900 3549900 3016000 20001 697 7559 7734 31329;31330 31329 LDFSTGNFNVLAVR 14 0 1 Unmodified _LDFSTGNFNVLAVR_ 0 0 0 G3XAN4;Q6FHU7;Q6FHL3;A8K032;Q15629 G3XAN4 G3XAN4 TRAM1 Translocating chain-associated membrane protein;Translocating chain-associated membrane protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 781.9147 2 776.909547 1551.80454 69321.13 0.90921 0.00070638 -0.1557 -0.00012096 0.75352 0.00058541 776.909443964432 782.414740169255 128.45 0.6089 128.45 128.23 128.83 0 98 24 7 0 0 0 0.00010345 2 76669 84.658 84.658 1 0.71803 0.60783 0 4687900 2584800 2103000 20002 697 7559 7734 31331;31332 31331 LDFVCSFLQK 10 1 0 Unmodified _LDFVCSFLQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;F5GWK2;F5H073;F5H068;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.8212 2 628.820824 1255.62709 78038.24 1.1359 0.00071429 0.053392 3.3574E-05 1.1893 0.00074787 628.820769293879 632.827797188002 110.44 0.56171 110.44 110.21 110.77 0 170 40 6 0 0 0 0.00050835 1 69303 85.731 73.203 1 0.7577 0.80358 0 31433000 17251000 14181000 20003 186;1747;718 7560 7735 31333 31333 LDFVCSFLQK 10 1 0 Unmodified _LDFVCSFLQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;F5GWK2;F5H073;F5H068;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.8216 2 628.820824 1255.62709 78289.06 0.89775 0.00056453 -0.024884 -1.5647E-05 0.87287 0.00054888 628.820615464406 632.827917011779 109.9 0.55714 109.9 109.57 110.13 0 139 35 6 0 0 0 6.8751E-06 1 70548 107.57 91.035 1 0.79959 0.82546 0 18357000 9961000 8396400 20004 186;1747;718 7560 7735 31334 31334 LDFVCSFLQK 10 1 0 Unmodified _LDFVCSFLQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;F5GWK2;F5H073;F5H068;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.8284 2 628.820824 1255.62709 75880.57 0.78067 0.0004909 0.056482 3.5517E-05 0.83715 0.00052642 628.821005696185 632.828600170415 121.38 0.61597 121.38 121.21 121.83 0 127 29 8 0 0 0 0.00013082 2 72216 96.331 79.791 1 1.4352 1.1473 0 8956700 3642800 5313900 20005 186;1747;718 7560 7735 31335;31336 31335 LDFVCSFLQK 10 1 0 Unmodified _LDFVCSFLQK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;F8W6T3;F5GWK2;F5H073;F5H068;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.8214 2 628.820824 1255.62709 76091.68 0.79241 0.00049829 0.19439 0.00012224 0.9868 0.00062052 628.820911430005 632.828441474728 121.19 0.64996 121.19 121.03 121.68 0 136 34 8 0 0 0 4.8926E-08 2 71170 116.05 99.511 1 1.3417 1.1086 0 11655000 3836000 7818900 20006 186;1747;718 7560 7735 31337;31338 31338 LDGFPLLR 8 0 1 Unmodified _LDGFPLLR_ 0 0 0 Q53G61;Q53G21;P09661;H0YKK0;Q6NVW9 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.7781 2 465.774003 929.533452 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.72 1 103.72 103.22 104.22 7.6294E-06 0 0 0 0.041117 1 65640 57.559 19.321 1 20007 1461 7561 7736 31339 31339 LDGLLER 7 0 1 Unmodified _LDGLLER_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.235 2 408.23471 814.454868 99748.48 0.1428 5.8296E-05 0.13833 5.647E-05 0.28113 0.00011477 408.234760837093 413.238839493482 53.721 0.44186 53.721 53.543 53.985 0 103 34 4 0 0 0 0.028805 1 30064 71.342 17.138 1 0.69968 0.72054 0 24723000 15919000 8803500 20008 1224 7562 7737 31340 31340 LDGLLER 7 0 1 Unmodified _LDGLLER_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.2348 2 408.23471 814.454868 96775.01 0.26798 0.0001094 -0.10635 -4.3418E-05 0.16163 6.5982E-05 408.234643796597 413.238733857374 52.441 0.51214 52.441 52.189 52.701 0 124 38 4 0 0 0 0.041927 1 29845 58.782 14.665 1 0.72109 0.79008 0 31242000 18506000 12736000 20009 1224 7562 7737 31341 31341 LDGLVETPTGYIESLPR 17 0 1 Unmodified _LDGLVETPTGYIESLPR_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YHC3;B7Z9C2;F8VRJ2;B7Z5H0 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 930.9929 2 930.491098 1858.96764 63447.16 0.40404 0.00037595 0.22455 0.00020894 0.62859 0.0005849 930.491291665791 935.996951277805 114.28 0.72986 114.28 113.91 114.64 0 362 53 10 0 0 0 1.3083E-09 2 72332 110.38 110.38 1 1.1364 1.3181 0 173060000 81019000 92042000 20010 332 7563 7738 31342;31343 31342 LDGLVETPTGYIESLPR 17 0 1 Unmodified _LDGLVETPTGYIESLPR_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YHC3;B7Z9C2;F8VRJ2;B7Z5H0 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 935.4984 2 930.491098 1858.96764 63442.17 0.43624 0.00040592 0.044562 4.1464E-05 0.48081 0.00044739 930.992654110114 935.495374030217 113.76 0.76514 113.76 113.47 114.23 -7.6294E-06 382 55 10 0 0 0 5.0394E-06 3 73732 86.699 86.699 1 1.1159 1.2737 0 145140000 71531000 73607000 20011 332 7563 7738 31344;31345;31346 31345 LDGLVETPTGYIESLPR 17 0 1 Unmodified _LDGLVETPTGYIESLPR_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YHC3;B7Z9C2;F8VRJ2;B7Z5H0 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 935.4939 2 930.491098 1858.96764 63645.54 0.82766 0.00077013 0.02745 2.5542E-05 0.85511 0.00079567 930.992593145541 935.495329541125 125.51 0.98466 125.51 125.19 126.18 0 312 40 12 0 0 0 1.357E-09 2 75240 110.29 110.29 1 1.6778 1.4518 0 128190000 47549000 80645000 20012 332 7563 7738 31347;31348 31347 LDGLVETPTGYIESLPR 17 0 1 Unmodified _LDGLVETPTGYIESLPR_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YHC3;B7Z9C2;F8VRJ2;B7Z5H0 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 930.9932 2 930.491098 1858.96764 63814.21 0.68573 0.00063806 0.12659 0.00011779 0.81232 0.00075586 930.992729934975 935.495370256364 125.4 1.2383 125.4 125.1 126.34 0 332 55 12 0 0 0 9.5196E-13 2 74268 119.39 119.39 1 1.651 1.4415 0 131430000 49507000 81926000 20013 332 7563 7738 31349;31350 31350 LDGNELDLSLSDLNEVPVK 19 1 0 Unmodified _LDGNELDLSLSDLNEVPVK_ 0 0 0 Q96AG4;I3L223 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1039.5425 2 1035.53369 2069.05283 60063.7 0.82919 0.00085866 -0.27765 -0.00028752 0.55154 0.00057114 1036.03444842276 1039.54044745854 120.77 0.55827 120.77 120.53 121.09 7.6294E-06 272 40 10 0 0 0 1.7861E-22 2 77816 128.76 128.76 1 0.93009 1.0538 0 98309000 53978000 44332000 20014 1958 7564 7739 31351;31352 31352 LDGNELDLSLSDLNEVPVK 19 1 0 Unmodified _LDGNELDLSLSDLNEVPVK_ 0 0 0 Q96AG4;I3L223 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1036.0352 2 1035.53369 2069.05283 59692.48 0.80821 0.00083693 -0.20599 -0.0002133 0.60222 0.00062362 1036.03462479137 1039.54066134842 120.39 0.49525 120.39 120.15 120.65 0 271 35 10 0 0 0 7.1984E-23 2 79449 134.24 134.24 1 0.89458 1.0117 0 132340000 71822000 60523000 20015 1958 7564 7739 31353;31354 31354 LDGNELDLSLSDLNEVPVK 19 1 0 Unmodified _LDGNELDLSLSDLNEVPVK_ 0 0 0 Q96AG4;I3L223 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1040.0426 2 1035.53369 2069.05283 60284.5 0.69389 0.00071855 -0.20956 -0.000217 0.48433 0.00050154 1035.53353928231 1040.04190437188 133.24 0.61307 133.24 133.03 133.64 0 193 27 10 0 0 0 1.3496E-05 2 81046 69.258 69.258 1 0.66894 0.57178 0 68037000 41318000 26719000 20016 1958 7564 7739 31355;31356 31356 LDGNELDLSLSDLNEVPVK 19 1 0 Unmodified _LDGNELDLSLSDLNEVPVK_ 0 0 0 Q96AG4;I3L223 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1036.0365 2 1035.53369 2069.05283 60288.8 0.8955 0.00092732 -0.11579 -0.0001199 0.77971 0.00080742 1036.03484030775 1040.04207808112 132.99 0.50427 132.99 132.83 133.33 0 151 22 9 0 0 0 5.3904E-08 2 79997 89.466 89.466 1 0.72876 0.59395 0 25739000 14449000 11291000 20017 1958 7564 7739 31357;31358 31357 LDGTEINGR 9 0 1 Unmodified _LDGTEINGR_ 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.7492 2 487.748713 973.482873 84122.2 0.21026 0.00010256 1.0224 0.00049867 1.2327 0.00060123 487.749161366689 492.753441378915 25.315 0.3991 25.315 25.07 25.469 0 69 18 5 0 0 0 0.013268 1 10947 56.729 13.483 1 1.4077 1.44 0 34657000 15328000 19329000 20018 748 7565 7740 31359 31359 LDHTNFR 7 0 1 Unmodified _LDHTNFR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.7324 2 451.727584 901.440614 91926.79 0.1475 6.6629E-05 0.61204 0.00027647 0.75954 0.0003431 451.727847955726 456.732009746343 19.814 0.63321 19.814 19.41 20.043 0 120 37 5 0 0 0 0.026804 2 6269 85.359 57.105 1 1.0038 1.0238 0 18717000 9223300 9493500 20019 1412 7566 7741 31360;31361 31361 LDHVVTIIK 9 1 0 Unmodified _LDHVVTIIK_ 0 0 0 E9PKG1;Q5U8W9;H7C2I1;Q99873;A0A087X1W2;E9PNR9;E9PQ98;E9PIX6;H0YDE4;B4DJ87 E9PKG1 E9PKG1 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.3281 2 519.321317 1036.62808 NaN NaN NaN -0.1983 -0.00010298 NaN NaN NaN NaN 55.701 0.39416 55.701 55.537 55.931 3.8147E-06 0 0 0 0.012639 1 31287 64.654 29.358 1 NaN NaN 0 6386600 0 6386600 20020 1243 7567 7742 31362 31362 LDHVVTIIK 9 1 0 Unmodified _LDHVVTIIK_ 0 0 0 E9PKG1;Q5U8W9;H7C2I1;Q99873;A0A087X1W2;E9PNR9;E9PQ98;E9PIX6;H0YDE4;B4DJ87 E9PKG1 E9PKG1 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.3279 2 519.321317 1036.62808 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.166 1 54.166 53.666 54.666 0 0 0 0 0.028796 1 30949 53.404 25.668 1 20021 1243 7567 7742 31363 31363 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7807 2 486.779285 971.544017 85051.13 0.4037 0.00019651 -0.62672 -0.00030507 -0.22302 -0.00010856 486.779387591027 490.785647483267 41.517 1.3298 41.517 40.877 42.207 0 636 107 10 0 0 0 2.494E-05 3 21758 139.68 59.285 1 0.61753 0.75271 0 2889300000 1829500000 1059700000 20022 796 7568 7743 31364;31365;31366 31364 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7795 2 486.779285 971.544017 87096.35 0.38335 0.00018661 0.36633 0.00017832 0.74968 0.00036493 486.779402345935 490.786633538296 42.653 0.38275 42.653 42.503 42.886 0 98 32 4 0 0 0 0.026353 1 22868 54.611 17.053 1 0.63238 0.61947 0 21775000 13627000 8148300 20023 796 7568 7743 31367 31367 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7801 2 486.779285 971.544017 87096.3 0.34899 0.00016988 -0.1575 -7.6668E-05 0.19149 9.3215E-05 486.779253516105 490.786056035408 43.678 0.62935 43.678 43.454 44.083 0 127 55 4 0 0 0 0.039022 1 23540 47.749 26.002 1 0.65122 0.66107 0 13556000 7657900 5898400 20024 796 7568 7743 31368 31368 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.7791 2 486.779285 971.544017 NaN NaN NaN -0.057671 -2.8073E-05 NaN NaN NaN NaN 42.17 0.13095 42.17 42.076 42.207 0 0 0 0 0.0028384 1 22319 106.14 42.835 1 NaN NaN 0 32117000 32117000 0 20025 796 7568 7743 31369 31369 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7791 2 486.779285 971.544017 85326.09 0.62444 0.00030396 -0.30564 -0.00014878 0.3188 0.00015519 486.77941228968 490.785971962062 39.86 1.017 39.86 39.588 40.605 0 467 87 9 0 0 0 1.185E-08 3 21074 151.29 56.885 1 0.63379 0.75033 0 2366400000 1388000000 978370000 20026 796 7568 7743 31370;31371;31372 31371 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7807 2 486.779285 971.544017 86954.23 0.55525 0.00027028 0.048478 2.3598E-05 0.60373 0.00029388 486.779219844825 490.786395236887 41.114 0.69067 41.114 40.952 41.643 0 125 58 6 0 0 0 0.014493 1 22183 62.88 28.778 1 0.62525 0.6524 0 24381000 15249000 9132100 20027 796 7568 7743 31373 31373 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.7868 2 486.779285 971.544017 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.439 1 40.439 39.939 40.939 0 0 0 0 0.00021515 1 21583 113.5 41.784 1 20028 796 7568 7743 31374 31374 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.779 2 486.779285 971.544017 85440.45 4.2916E-05 2.0891E-08 0.047602 2.3172E-05 0.047645 2.3193E-05 486.779454756084 490.786248598382 46.822 3.6436 46.822 46.412 50.056 0 1110 275 10 0 0 0 5.1421E-14 6 22571 168.45 72.658 1 0.79915 0.70182 0 221120000 116820000 104300000 20029 796 7568 7743 31375;31376;31377;31378;31379;31380 31376 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.7796 2 486.779285 971.544017 85724.98 -0.058947 -2.8694E-05 -0.014936 -7.2707E-06 -0.073883 -3.5965E-05 486.77946715235 490.786152275399 46.932 3.9764 46.932 46.32 50.296 0 1194 307 10 0 0 0 8.434E-05 4 22372 137.18 62.764 1 0.78913 0.67778 0 149000000 84763000 64233000 20030 796 7568 7743 31381;31382;31383;31384 31384 LDIAQLEENLK 11 1 0 Unmodified _LDIAQLEENLK_ 0 0 0 Q05DM0;Q6NSC0;Q6PG44;B4DZK6;O75330;Q6PIR6;Q05D84 Q05DM0 Q05DM0 HMMR Hyaluronan mediated motility receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.3542 2 643.353542 1284.69253 78573.91 0.89229 0.00057406 -0.066763 -4.2952E-05 0.82553 0.00053111 643.353440948088 647.360706903646 107.17 0.37433 107.17 106.99 107.37 0 95 27 4 0 0 0 0.0038555 2 66836 59.067 48.31 1 0.70002 0.70653 0 5509400 3585600 1923800 20031 1057 7569 7744 31385;31386 31386 LDIDPSTITWQR 12 0 1 Unmodified _LDIDPSTITWQR_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.8798 2 722.875173 1443.73579 75647.19 0.76916 0.000556 -0.077278 -5.5863E-05 0.69188 0.00050014 722.875586761679 728.380852318208 114.05 0.4276 114.05 113.79 114.22 0 56 18 5 0 0 0 0.025337 1 65629 36.684 36.684 1 1.1714 1.0462 0 816810 337350 479470 20032 418 7570 7745 31387 31387 LDIDSPPITAR 11 0 1 Unmodified _LDIDSPPITAR_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13;H3BN34;H3BQZ3 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.3317 2 599.327328 1196.6401 78363.62 0.78292 0.00046923 0.62423 0.00037412 1.4072 0.00084334 599.327396578138 604.331863901129 77.484 0.67388 77.484 77.133 77.807 0 254 56 7 0 0 0 6.9031E-08 1 46688 114.4 87.098 1 3.3338 3.8028 0 140890000 36619000 104270000 20033 1481 7571 7746 31388 31388 LDIDSPPITAR 11 0 1 Unmodified _LDIDSPPITAR_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13;H3BN34;H3BQZ3 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 604.3329 2 599.327328 1196.6401 NaN NaN NaN 0.57362 0.00034379 NaN NaN NaN NaN 89.332 0.72694 89.332 89.007 89.734 0 0 0 0 0.0090387 1 49283 60.342 26.17 1 NaN NaN 0 5437100 0 5437100 20034 1481 7571 7746 31389 31389 LDIEDREIK 9 1 1 Unmodified _LDIEDREIK_ 0 0 1 C0JYZ2;D3DPG0;A0A0A0MTS7;Q8WZ42;D3DPF9;A0A0A0MRA3 C0JYZ2 C0JYZ2 TTN Titin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.8063 2 565.806228 1129.5979 NaN NaN NaN -0.26917 -0.0001523 NaN NaN NaN NaN 52.538 0.87555 52.538 51.996 52.872 0 0 0 0 0.0050662 1 29164 91.9 32.983 1 NaN NaN 0 25513000 25513000 0 20035 489 7572 7747 31390 31390 LDILDTAGQEEFGAMR 16 0 1 Oxidation (M) _LDILDTAGQEEFGAM(ox)R_ LDILDTAGQEEFGAM(1)R LDILDTAGQEEFGAM(54.7)R 0 1 0 A0A024QZF2;P10301;E9PK85;P62070 A0A024QZF2 A0A024QZF2 RRAS;RRAS2 Ras-related protein R-Ras;Ras-related protein R-Ras2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.4274 2 891.422358 1780.83016 NaN NaN NaN 0.5048 0.00044999 NaN NaN NaN NaN 99.799 0.40784 99.799 99.631 100.04 -7.6294E-06 0 0 0 0.0013053 1 61101 54.7 45.378 1 NaN NaN 0 4184300 0 4184300 20036 20 7573 7748 31391 31391 8 LDILDTAGQEEFGAMR 16 0 1 Oxidation (M) _LDILDTAGQEEFGAM(ox)R_ LDILDTAGQEEFGAM(1)R LDILDTAGQEEFGAM(73.85)R 0 1 0 A0A024QZF2;P10301;E9PK85;P62070 A0A024QZF2 A0A024QZF2 RRAS;RRAS2 Ras-related protein R-Ras;Ras-related protein R-Ras2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.428 2 891.422358 1780.83016 65513.17 0.59587 0.00053117 0.45931 0.00040944 1.0552 0.00094061 891.423046064059 896.928134942103 99.206 0.39369 99.206 99.063 99.457 0 87 33 5 0 0 0 7.5582E-05 1 62154 73.848 64.526 1 2.6101 2.5897 0 11978000 3044500 8933500 20037 20 7573 7748 31392 31392 8 LDILELLEK 9 1 0 Unmodified _LDILELLEK_ 0 0 0 A8K7H4;O43929;Q96B14;B7Z2M4;Q53TH5;CON__Q2YDI2 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.3264 2 543.326265 1084.63798 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129 1 129 128.5 129.5 0 0 0 0 0.00023342 1 84127 105.52 34.019 1 + 20038 772 7574 7749 31393 31393 LDILELLEK 9 1 0 Unmodified _LDILELLEK_ 0 0 0 A8K7H4;O43929;Q96B14;B7Z2M4;Q53TH5;CON__Q2YDI2 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.334 2 543.326265 1084.63798 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.01 1 129.01 128.51 129.51 0 0 0 0 0.0016935 1 84136 91.087 32.107 1 + 20039 772 7574 7749 31394 31394 LDILELLEK 9 1 0 Unmodified _LDILELLEK_ 0 0 0 A8K7H4;O43929;Q96B14;B7Z2M4;Q53TH5;CON__Q2YDI2 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3335 2 543.326265 1084.63798 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.58 1 128.58 128.08 129.08 0 0 0 0 0.00023342 1 85938 105.52 42.974 1 + 20040 772 7574 7749 31395 31395 LDILELLEK 9 1 0 Unmodified _LDILELLEK_ 0 0 0 A8K7H4;O43929;Q96B14;B7Z2M4;Q53TH5;CON__Q2YDI2 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.3264 2 543.326265 1084.63798 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.62 1 128.62 128.12 129.12 0 0 0 0 0.00035711 1 85956 104.2 20.936 1 + 20041 772 7574 7749 31396 31396 LDILELLEK 9 1 0 Unmodified _LDILELLEK_ 0 0 0 A8K7H4;O43929;Q96B14;B7Z2M4;Q53TH5;CON__Q2YDI2 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3338 2 543.326265 1084.63798 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.78 1 128.78 128.28 129.28 0 0 0 0 0.0087806 1 86051 64.841 21.758 1 + 20042 772 7574 7749 31397 31397 LDILGAAETGSGK 13 1 0 Unmodified _LDILGAAETGSGK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;Q59FS7;B4DM03 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.3305 2 616.330067 1230.64558 NaN NaN NaN -0.11695 -7.2078E-05 NaN NaN NaN NaN 78.982 0.51623 78.982 78.642 79.158 0 0 0 0 0.0098752 1 46890 53.211 26.422 1 NaN NaN 0 11575000 11575000 0 20043 993 7575 7750 31398 31398 LDILGAAETGSGK 13 1 0 Unmodified _LDILGAAETGSGK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;Q59FS7;B4DM03 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.3373 2 616.330067 1230.64558 78963.37 0.49933 0.00030775 -0.20399 -0.00012572 0.29535 0.00018203 616.329586563024 620.337182644153 77.822 0.60326 77.822 77.565 78.169 0 228 52 6 0 0 0 0.0003035 2 47091 78.692 41.216 1 0.6842 0.70885 0 24818000 14813000 10005000 20044 993 7575 7750 31399;31400 31400 LDISDEFSEAIK 12 1 0 Unmodified _LDISDEFSEAIK_ 0 0 0 A8K9B9;A0A024R9N6;Q9H223 A8K9B9 A8K9B9 EHD4 EH domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3531 2 683.840465 1365.66638 70897.77 0.58102 0.00039733 0.61932 0.00042352 1.2003 0.00082084 684.340608696235 687.848684660388 104.15 0.49951 104.15 103.95 104.45 7.6294E-06 117 40 4 0 0 0 0.0029259 1 64334 57.348 39.484 1 1.1795 1.1762 0 7889900 2733700 5156200 20045 284 7576 7751 31401 31401 LDISDEFSEAIK 12 1 0 Unmodified _LDISDEFSEAIK_ 0 0 0 A8K9B9;A0A024R9N6;Q9H223 A8K9B9 A8K9B9 EHD4 EH domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.3518 2 683.840465 1365.66638 72944.86 0.13395 9.1602E-05 0.66066 0.00045178 0.79461 0.00054339 684.340456373333 687.848778672387 103.5 0.64957 103.5 103.2 103.85 0 119 54 4 0 0 0 0.017123 1 65523 41.704 25.033 1 1.4462 1.5096 0 10090000 6043000 4046500 20046 284 7576 7751 31402 31402 LDISDEFSEVIK 12 1 0 Unmodified _LDISDEFSEVIK_ 0 0 0 B2R5U3;A0A024R571;Q9H4M9;C9JC03;B4DZH9;B4DMV9;B4DR44;B4DTR4;Q9NZN3;C9JDQ8;C9J2Z4 B2R5U3 B2R5U3 EHD1;EHD3 EH domain-containing protein 1;EH domain-containing protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.3645 2 697.856115 1393.69768 NaN NaN NaN 0.084703 5.911E-05 NaN NaN NaN NaN 112.83 0.48287 112.83 112.61 113.09 0 0 0 0 0.0042184 1 73116 64.374 45.103 1 NaN NaN 0 3364700 0 3364700 20047 172 7577 7752 31403 31403 LDLAGR 6 0 1 Unmodified _LDLAGR_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;G8FSY7;Q562X7;Q562X4;Q562X2;Q562X1;Q562W9;Q562T6;Q562T5;Q562T4;Q562T3;Q562T0;Q562S2;Q562R6;Q562R4;Q562R0;Q562Q9;Q562Q8;Q562Q6;Q562Q5;Q562Q4;Q562Q3;Q562Q1;Q562Q0;Q562L3;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q9BYX7;Q562Z4;Q562V5;Q562U2;Q562N6;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;V9HVZ7;Q562L9 B7Z6P1;Q53GK6;P63261;V9HVZ7;Q562L9 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;ACT;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 322.69 2 322.689939 643.365324 103771 -0.032092 -1.0356E-05 -0.46678 -0.00015062 -0.49887 -0.00016098 322.689961450561 327.693938235797 30.66 0.90466 30.66 30.438 31.343 0 381 81 8 0 0 0 0.011167 1 14932 136.19 0 1 1.8346 2.1883 0 3008900000 974510000 2034400000 20048 1624;1656;1100;2186;1796 7578 7753 31404 31404 LDLAGR 6 0 1 Unmodified _LDLAGR_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;G8FSY7;Q562X7;Q562X4;Q562X2;Q562X1;Q562W9;Q562T6;Q562T5;Q562T4;Q562T3;Q562T0;Q562S2;Q562R6;Q562R4;Q562R0;Q562Q9;Q562Q8;Q562Q6;Q562Q5;Q562Q4;Q562Q3;Q562Q1;Q562Q0;Q562L3;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q9BYX7;Q562Z4;Q562V5;Q562U2;Q562N6;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;V9HVZ7;Q562L9 B7Z6P1;Q53GK6;P63261;V9HVZ7;Q562L9 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;ACT;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 322.6898 2 322.689939 643.365324 103071 -0.083738 -2.7021E-05 -0.14851 -4.7922E-05 -0.23225 -7.4943E-05 322.690011969644 327.694018411677 30.118 0.69734 30.118 29.913 30.61 -1.9073E-06 285 58 9 0 0 0 0.011167 1 14621 136.19 0 1 1.8911 2.2471 0 2228800000 736990000 1491800000 20049 1624;1656;1100;2186;1796 7578 7753 31405 31405 LDLAGR 6 0 1 Unmodified _LDLAGR_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;K4EQ44;K4EP00;K4ENJ5;G8FSY7;Q562X7;Q562X4;Q562X2;Q562X1;Q562W9;Q562T6;Q562T5;Q562T4;Q562T3;Q562T0;Q562S2;Q562R6;Q562R4;Q562R0;Q562Q9;Q562Q8;Q562Q6;Q562Q5;Q562Q4;Q562Q3;Q562Q1;Q562Q0;Q562L3;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q9BYX7;Q562Z4;Q562V5;Q562U2;Q562N6;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;V9HVZ7;Q562L9 B7Z6P1;Q53GK6;P63261;V9HVZ7;Q562L9 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;ACT;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 322.6897 2 322.689939 643.365324 105742.8 -0.090267 -2.9128E-05 0.029331 9.4649E-06 -0.060935 -1.9663E-05 322.689883036031 327.69398165344 34.159 0.66858 34.159 33.951 34.62 0 228 54 7 0 0 0 0.058888 1 14562 81.716 0 1 2.3219 2.0253 0 36607000 11698000 24909000 20050 1624;1656;1100;2186;1796 7578 7753 31406 31406 LDLAGTLPGSK 11 1 0 Unmodified _LDLAGTLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.3061 2 536.305864 1070.59717 82260.92 0.36358 0.00019499 -0.21949 -0.00011771 0.14409 7.7278E-05 536.305926736257 540.312882367811 77.794 1.1662 77.794 76.944 78.111 0 498 94 8 0 0 0 9.0028E-05 2 45874 97.565 63.923 1 1.7283 2.0292 0 305570000 112370000 193200000 20051 1569 7579 7754 31407;31408 31408 LDLAGTLPGSK 11 1 0 Unmodified _LDLAGTLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.3131 2 536.305864 1070.59717 83128.87 0.39873 0.00021384 0.078859 4.2293E-05 0.47759 0.00025614 536.305913141022 540.312920013515 76.815 1.2337 76.815 76.359 77.593 -7.6294E-06 449 97 9 0 0 0 0.00020612 2 46229 92.538 74.503 1 1.6935 1.9899 0 356690000 131160000 225530000 20052 1569 7579 7754 31409;31410 31409 LDLAGTLPGSK 11 1 0 Unmodified _LDLAGTLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.3134 2 536.305864 1070.59717 82404.6 0.75937 0.00040726 -0.42009 -0.0002253 0.33928 0.00018196 536.305771042839 540.312721864173 88.51 1.6752 88.51 87.926 89.601 0 527 107 9 0 0 0 0.0022273 3 49091 62.005 46.854 1 3.2476 2.7778 0 70150000 16992000 53158000 20053 1569 7579 7754 31411;31412;31413 31413 LDLAGTLPGSK 11 1 0 Unmodified _LDLAGTLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.3063 2 536.305864 1070.59717 82142.52 0.41513 0.00022264 0.055276 2.9645E-05 0.47041 0.00025228 536.30602366914 540.312980074179 88.509 1.5511 88.509 88.056 89.607 0 502 93 9 0 0 0 0.00028717 3 47885 89.029 56.419 1 3.1531 2.679 0 74480000 18349000 56130000 20054 1569 7579 7754 31414;31415;31416 31415 LDLDFPNLPYLLDGK 15 1 0 Unmodified _LDLDFPNLPYLLDGK_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.9694 2 866.961445 1731.90834 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.56 1 133.56 133.06 134.06 0 0 0 0 0.011744 1 89773 46.069 31.911 1 20055 1503 7580 7755 31417 31417 LDLDLTADSQPPVFK 15 1 0 Unmodified _LDLDLTADSQPPVFK_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.9432 2 829.935428 1657.8563 65616.59 0.96946 0.00080459 0.17228 0.00014298 1.1417 0.00094757 830.43675568298 833.942394957559 111.76 0.59699 111.76 111.55 112.15 0 274 43 8 0 0 0 5.0325E-07 2 70503 102.4 102.4 1 1.7281 1.9525 0 82497000 28624000 53873000 20056 862 7581 7756 31418;31419 31419 LDLDLTADSQPPVFK 15 1 0 Unmodified _LDLDLTADSQPPVFK_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.9434 2 829.935428 1657.8563 65566.77 0.82456 0.00068433 0.33629 0.0002791 1.1608 0.00096343 829.935098860637 833.942479356636 111.34 0.63109 111.34 111.07 111.7 0 242 42 8 0 0 0 1.6472E-10 3 71782 121.02 121.02 1 1.6844 1.8991 0 67403000 24792000 42612000 20057 862 7581 7756 31420;31421;31422 31421 LDLDLTADSQPPVFK 15 1 0 Unmodified _LDLDLTADSQPPVFK_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.9432 2 829.935428 1657.8563 65336.77 0.93568 0.00077656 -0.55543 -0.00046097 0.38025 0.00031558 830.436378624293 833.941882144039 122.89 0.83891 122.89 122.57 123.41 0 193 38 8 0 0 0 0.0005684 2 73352 54.7 54.7 1 1.3268 1.0497 0 10492000 4325600 6166800 20058 862 7581 7756 31423;31424 31424 LDLDLTADSQPPVFK 15 1 0 Unmodified _LDLDLTADSQPPVFK_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 833.942 2 829.935428 1657.8563 65447.96 0.99028 0.00082187 -0.84303 -0.00069966 0.14725 0.00012221 829.934936716855 833.941691865756 122.83 0.81174 122.83 122.49 123.3 0 181 39 8 0 0 0 0.001153 2 72351 48.568 48.568 1 1.2462 1.0151 0 6744500 2615700 4128800 20059 862 7581 7756 31425;31426 31425 LDLGEDYPSGK 11 1 0 Unmodified _LDLGEDYPSGK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.288 2 597.287868 1192.56118 81294.24 0.54554 0.00032584 0.40202 0.00024012 0.94756 0.00056596 597.287986194439 601.29521280998 58.173 0.74203 58.173 57.853 58.595 0 232 58 6 0 0 0 0.006395 3 33051 54.486 31.167 1 1.2078 1.3102 0 45242000 18371000 26871000 20060 1379 7582 7757 31427;31428;31429 31428 LDLGEDYPSGK 11 1 0 Unmodified _LDLGEDYPSGK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.2891 2 597.287868 1192.56118 78973.84 0.55074 0.00032895 0.49123 0.0002934 1.042 0.00062235 597.288124966942 601.295248739014 57.347 0.74088 57.347 56.92 57.661 3.8147E-06 235 57 7 0 0 0 0.0048085 2 33067 57.348 28.622 1 1.3354 1.5064 0 63208000 26987000 36221000 20061 1379 7582 7757 31430;31431 31430 LDLGEDYPSGK 11 1 0 Unmodified _LDLGEDYPSGK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.288 2 597.287868 1192.56118 79587.85 0.53786 0.00032125 0.22169 0.00013241 0.75954 0.00045367 597.287889305717 601.295296851199 67.534 0.95068 67.534 67.16 68.11 0 266 68 6 0 0 0 0.003118 5 35137 60.398 36.368 1 1.5938 1.2675 0 6626200 2767800 3858400 20062 1379 7582 7757 31432;31433;31434;31435;31436 31435 LDLGEDYPSGK 11 1 0 Unmodified _LDLGEDYPSGK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.2953 2 597.287868 1192.56118 76950.97 0.5117 0.00030563 0.31038 0.00018539 0.82208 0.00049102 597.288144761737 601.295064626558 68.152 0.82644 68.152 67.808 68.635 0 253 50 7 0 0 0 0.0040353 2 34651 58.743 30.73 1 1.7475 1.4234 0 6774700 2470800 4303900 20063 1379 7582 7757 31437;31438 31437 LDLLGNLPGSK 11 1 0 Unmodified _LDLLGNLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.8346 2 563.826963 1125.63937 80788.84 0.88969 0.00050163 0.087378 4.9266E-05 0.97706 0.00055089 563.827075141325 567.83420364182 99.988 2.0975 99.988 99.251 101.35 0 898 169 10 0 0 0 0.00020829 4 61619 92.445 76.783 1 1.7293 2.0685 0 854930000 295630000 559300000 20064 1569 7583 7758 31439;31440;31441;31442 31441 LDLLGNLPGSK 11 1 0 Unmodified _LDLLGNLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.8352 2 563.826963 1125.63937 NaN NaN NaN -0.41504 -0.00023401 NaN NaN NaN NaN 101.48 0.37564 101.48 101.35 101.72 0 0 0 0 0.01936 1 62372 53.327 37.124 1 NaN NaN 0 3038500 0 3038500 20065 1569 7583 7758 31443 31443 LDLLGNLPGSK 11 1 0 Unmodified _LDLLGNLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.8344 2 563.826963 1125.63937 80526.63 0.7431 0.00041898 0.0059256 3.341E-06 0.74903 0.00042232 563.827067882279 567.834180207545 99.432 1.7831 99.432 98.504 100.29 0 844 145 10 0 0 0 0.00037953 6 62592 83.081 67.419 1 1.7813 2.1005 0 729350000 274170000 455180000 20066 1569 7583 7758 31444;31445;31446;31447;31448;31449 31446 LDLLGNLPGSK 11 1 0 Unmodified _LDLLGNLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.8343 2 563.826963 1125.63937 NaN NaN NaN -0.61073 -0.00034435 NaN NaN NaN NaN 100.63 0.50072 100.63 100.54 101.04 0 0 0 0 0.025756 1 63412 51.436 28.696 1 NaN NaN 0 3002900 0 3002900 20067 1569 7583 7758 31450 31450 LDLLGNLPGSK 11 1 0 Unmodified _LDLLGNLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.8275 2 563.826963 1125.63937 80873.87 0.9233 0.00052058 -0.45251 -0.00025514 0.47078 0.00026544 563.826960869699 567.833958926275 112.51 1.5946 112.51 112 113.6 0 413 75 10 0 0 0 0.00083838 4 65283 72.096 56.434 1 3.5211 3.1276 0 362750000 79688000 283060000 20068 1569 7583 7758 31451;31452;31453;31454 31451 LDLLGNLPGSK 11 1 0 Unmodified _LDLLGNLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.8344 2 563.826963 1125.63937 80650.54 0.62345 0.00035152 -0.18375 -0.00010361 0.4397 0.00024791 563.827155930954 567.834147127511 112.38 1.9579 112.38 111.85 113.81 0 480 99 11 0 0 0 0.001099 5 64257 70.1 54.438 1 3.3497 2.921 0 392640000 86959000 305680000 20069 1569 7583 7758 31455;31456;31457;31458;31459 31455 LDLPGNLPGSK 11 1 0 Unmodified _LDLPGNLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.8116 2 555.811313 1109.60807 81210.09 0.90839 0.00050489 -0.41983 -0.00023334 0.48856 0.00027155 555.811142153501 559.818108167004 80.273 1.0233 80.273 79.874 80.897 0 478 86 9 0 0 0 0.00036959 2 47657 83.862 61.081 1 1.747 2.07 0 463580000 165570000 298020000 20070 1569 7584 7759 31460;31461 31461 LDLPGNLPGSK 11 1 0 Unmodified _LDLPGNLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.8186 2 555.811313 1109.60807 80277.24 0.68429 0.00038033 -0.17431 -9.6882E-05 0.50998 0.00028345 555.811270406347 559.818272825481 79.321 0.99242 79.321 78.846 79.838 -7.6294E-06 473 84 9 0 0 0 4.5693E-10 2 48056 130.79 93.947 1 1.7347 2.0426 0 467170000 174310000 292850000 20071 1569 7584 7759 31462;31463 31462 LDLPGNLPGSK 11 1 0 Unmodified _LDLPGNLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.8184 2 555.811313 1109.60807 81196.84 0.6069 0.00033732 -0.13835 -7.6894E-05 0.46856 0.00026043 555.811381464057 559.818319590232 91.603 1.3624 91.603 91.185 92.548 0 477 87 9 0 0 0 0.0012874 2 50803 68.657 52.995 1 3.4248 2.9746 0 136490000 31721000 104770000 20072 1569 7584 7759 31464;31465 31464 LDLPGNLPGSK 11 1 0 Unmodified _LDLPGNLPGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.8121 2 555.811313 1109.60807 80831.84 0.53661 0.00029825 -0.27618 -0.0001535 0.26043 0.00014475 555.811279046961 559.818246660096 91.445 1.2355 91.445 91.103 92.339 0 449 78 9 0 0 0 0.0036568 2 49889 59.426 43.764 1 3.5935 3.072 0 110200000 24452000 85745000 20073 1569 7584 7759 31466;31467 31467 LDLQFQAIK 9 1 0 Unmodified _LDLQFQAIK_ 0 0 0 F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 F2Z2U4 F2Z2U4 TRRAP Transformation/transcription domain-associated protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.3119 2 538.310949 1074.60735 NaN NaN NaN 0.026152 1.4078E-05 NaN NaN NaN NaN 92.547 0.67885 92.547 92.181 92.86 0 0 0 0 0.009605 1 56221 67.032 32.224 1 NaN NaN 0 4492600 4492600 0 20074 1253 7585 7760 31468 31468 LDLQQGQNLLQGLSK 15 1 0 Unmodified _LDLQQGQNLLQGLSK_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.9668 2 827.959768 1653.90498 67969.59 0.80454 0.00066612 0.44589 0.00036918 1.2504 0.0010353 827.960626431494 831.967153252154 109.44 0.4128 109.44 109.21 109.62 0 113 30 5 0 0 0 3.5679E-22 2 68516 146.07 146.07 1 1.3726 1.4353 0 15097000 6842100 8255100 20075 1102 7586 7761 31469;31470 31469 LDLQQGQNLLQGLSK 15 1 0 Unmodified _LDLQQGQNLLQGLSK_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.9684 2 827.959768 1653.90498 68463.63 0.96338 0.00079764 0.40164 0.00033255 1.365 0.0011302 827.960300998037 831.967103272927 108.95 0.36967 108.95 108.72 109.09 -7.6294E-06 121 28 6 0 0 0 4.1839E-22 2 69790 145.29 145.29 1 1.4025 1.3999 0 14949000 5492400 9456700 20076 1102 7586 7761 31471;31472 31471 LDLQQGQNLLQGLSK 15 1 0 Unmodified _LDLQQGQNLLQGLSK_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.9675 2 827.959768 1653.90498 69637.72 0.82175 0.00068038 0.15367 0.00012723 0.97542 0.00080761 827.959867483858 831.967311719856 120.79 0.36266 120.79 120.65 121.01 0 66 17 5 0 0 0 0.0042874 1 71787 39.661 39.661 1 1.2651 0.98374 0 3394800 1434700 1960100 20077 1102 7586 7761 31473 31473 LDLQQGQNLLQGLSK 15 1 0 Unmodified _LDLQQGQNLLQGLSK_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.9598 2 827.959768 1653.90498 69448.47 0.90614 0.00075025 -0.059407 -4.9186E-05 0.84673 0.00070106 827.959266994777 831.967101527225 120.67 0.34949 120.67 120.45 120.8 7.6294E-06 64 17 6 0 0 0 0.0038979 1 70734 40.767 40.767 1 1.4104 1.1572 0 5283000 2660000 2622900 20078 1102 7586 7761 31474 31474 LDLSHCSHLTDQSSNLLTAVGSSTR 25 0 1 Unmodified _LDLSHCSHLTDQSSNLLTAVGSSTR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.8326 4 675.58179 2698.29806 74802.53 0.41851 0.00028274 -0.41748 -0.00028204 0.0010229 6.9105E-07 675.832127951665 678.083875345749 102.95 0.34404 102.95 102.8 103.14 0 82 21 7 0 0 0 0.0050606 1 57606 24.644 24.644 1 0.63168 0.52409 0 5454500 3264000 2190500 20079 1323 7587 7762 31475 31475 LDLSVR 6 0 1 Unmodified _LDLSVR_ 0 0 0 E5KNY5;P42704;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 356.7158 2 351.710871 701.407189 NaN NaN NaN 0.062762 2.2074E-05 NaN NaN NaN NaN 51.396 0.56995 51.396 51.171 51.741 3.8147E-06 0 0 0 0.054104 1 28411 69.432 10.771 1 NaN NaN 0 25069000 0 25069000 20080 1207 7588 7763 31476 31476 LDLSVR 6 0 1 Unmodified _LDLSVR_ 0 0 0 E5KNY5;P42704;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 351.7108 2 351.710871 701.407189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.423 1 51.423 50.923 51.923 0 0 0 0 0.051608 1 28449 95.957 20.275 1 20081 1207 7588 7763 31477 31477 LDLSVTEAVVAGIAK 15 1 0 Unmodified _LDLSVTEAVVAGIAK_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93;Q71VH3 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.4376 2 743.429781 1484.84501 NaN NaN NaN 0.24137 0.00017944 NaN NaN NaN NaN 122.39 0.78732 122.39 122.18 122.97 0 0 0 0 4.2872E-07 1 79138 100.55 80.224 1 NaN NaN 0 10255000 0 10255000 20082 1507 7589 7764 31478 31478 LDLSVTEAVVAGIAK 15 1 0 Unmodified _LDLSVTEAVVAGIAK_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93;Q71VH3 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.4398 2 743.429781 1484.84501 71267.63 0.85942 0.00063892 0.28813 0.0002142 1.1475 0.00085312 743.430485524355 747.436966786 121.9 0.63333 121.9 121.71 122.34 0 159 44 5 0 0 0 2.6983E-07 1 80683 107.18 107.18 1 2.8879 2.9521 0 17350000 4142600 13208000 20083 1507 7589 7764 31479 31479 LDLSVVENGGLK 12 1 0 Unmodified _LDLSVVENGGLK_ 0 0 0 A8K245;Q99986;H0YJ50;H0YJJ9 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.3551 2 622.34826 1242.68197 75435.87 0.7107 0.00044231 -0.93148 -0.00057971 -0.22078 -0.0001374 622.348269258054 626.354697657506 108.04 0.70873 108.04 107.89 108.6 0 118 36 5 0 0 0 0.0017153 1 62042 60.434 42.998 1 1.8331 1.4508 0 6232200 2410900 3821400 20084 707 7590 7765 31480 31480 LDLTENLTGSK 11 1 0 Unmodified _LDLTENLTGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8242 2 595.816793 1189.61903 NaN NaN NaN 1.1619 0.00069228 NaN NaN NaN NaN 72.538 0.23495 72.538 72.363 72.598 0 0 0 0 3.8349E-16 1 42439 135.86 54.311 1 NaN NaN 0 127780000 0 127780000 20085 1569 7591 7766 31481 31481 LDLVMVILFK 10 1 0 Oxidation (M) _LDLVM(ox)VILFK_ LDLVM(1)VILFK LDLVM(90.66)VILFK 0 1 0 Q6FI30;B7Z4T6;P08651;Q13051;A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;U3KPY9;A0A087WXP2;Q5W0Y9;A0A0S2Z4H3;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4;S4R308;K7ESG9;K7EKH0;K7EJB0;Q7Z3K7;C9JWJ8;K7EN08;D2DXM9;B4DHW2;Q14938 Q6FI30;A0A1B0GW37;B1AKN6 Q6FI30 NFIC;NFI;NFIB;NFIA;NFIX;DKFZp686I05275 Nuclear factor 1;Nuclear factor 1 C-type;Nuclear factor 1 B-type;Nuclear factor 1 A-type;Nuclear factor 1 X-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.372 2 603.86196 1205.70937 79893.69 1.0789 0.00065152 -0.22066 -0.00013325 0.85826 0.00051827 603.861618539223 607.868893504363 130.75 0.34088 130.75 130.61 130.95 0 69 21 5 0 0 0 0.00014743 2 85269 90.657 90.657 1 1.4414 1.4849 0 4207300 1500700 2706600 20086 1091;816;473 7592 7767 31482;31483 31483 326 LDLVMVILFK 10 1 0 Oxidation (M) _LDLVM(ox)VILFK_ LDLVM(1)VILFK LDLVM(103.56)VILFK 0 1 0 Q6FI30;B7Z4T6;P08651;Q13051;A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;U3KPY9;A0A087WXP2;Q5W0Y9;A0A0S2Z4H3;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857;S4R3K4;S4R308;K7ESG9;K7EKH0;K7EJB0;Q7Z3K7;C9JWJ8;K7EN08;D2DXM9;B4DHW2;Q14938 Q6FI30;A0A1B0GW37;B1AKN6 Q6FI30 NFIC;NFI;NFIB;NFIA;NFIX;DKFZp686I05275 Nuclear factor 1;Nuclear factor 1 C-type;Nuclear factor 1 B-type;Nuclear factor 1 A-type;Nuclear factor 1 X-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.8616 2 603.86196 1205.70937 80433.09 0.82436 0.0004978 -0.13001 -7.851E-05 0.69435 0.00041929 603.861662500494 607.868949411986 130.3 0.31334 130.3 130.16 130.47 0 85 20 6 0 0 0 5.9198E-06 2 87058 103.56 103.56 1 1.7202 1.7446 0 5271000 2299000 2972000 20087 1091;816;473 7592 7767 31484;31485 31484 326 LDLVQSMMDCLYAK 14 1 0 2 Oxidation (M) _LDLVQSM(ox)M(ox)DCLYAK_ LDLVQSM(1)M(1)DCLYAK LDLVQSM(42)M(42)DCLYAK 0 2 0 G3V5S9;G3V1S4;Q4FZ45;Q9Y324 G3V5S9 G3V5S9 FCF1;DKFZp686O2396 rRNA-processing protein FCF1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 863.9012 2 859.893534 1717.77251 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.447 1 80.447 79.947 80.947 0 0 0 0 0.030828 1 49023 42.001 27.029 1 20088 1272 7593 7768 31486 31486 975;976 LDNASAFQGAVISPHYDSLLVK 22 1 0 Unmodified _LDNASAFQGAVISPHYDSLLVK_ 0 0 0 A0A024R5C5;P11498;E9PRE7 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.4167 3 782.40938 2344.20631 70748.04 0.86113 0.00067375 0.061465 4.8091E-05 0.92259 0.00072184 782.743491130837 785.080927565404 106.56 0.47848 106.56 106.38 106.86 -7.6294E-06 129 36 5 0 0 0 1.8701E-07 2 67805 52.909 52.909 1 2.0104 2.0234 0 13504000 4481000 9023000 20089 176 7594 7769 31487;31488 31487 LDNLLLDTEGFVK 13 1 0 Unmodified _LDNLLLDTEGFVK_ 0 0 0 Q16513 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.9006 2 738.900857 1475.78716 NaN NaN NaN -1.2708 -0.00093897 NaN NaN NaN NaN 117.12 0.3732 117.12 116.92 117.29 7.6294E-06 0 0 0 0.00013735 1 74878 90.653 54.709 1 NaN NaN 0 4352400 4352400 0 20090 1769 7595 7770 31489 31489 LDNLLLDTEGFVK 13 1 0 Unmodified _LDNLLLDTEGFVK_ 0 0 0 Q16513 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.4033 2 738.900857 1475.78716 NaN NaN NaN -0.50522 -0.00037331 NaN NaN NaN NaN 116.65 0.38557 116.65 116.42 116.81 -7.6294E-06 0 0 0 0.0026796 1 76401 68.132 50.911 1 NaN NaN 0 3924700 3924700 0 20091 1769 7595 7770 31490 31490 LDNLLLDTEGFVK 13 1 0 Unmodified _LDNLLLDTEGFVK_ 0 0 0 Q16513 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.4103 2 738.900857 1475.78716 NaN NaN NaN 1.6537 0.0012219 NaN NaN NaN NaN 128.88 0.29642 128.88 128.74 129.04 0 0 0 0 0.019879 1 77925 48.004 33.313 1 NaN NaN 0 794050 0 794050 20092 1769 7595 7770 31491 31491 LDNTLGGTSEVIHR 14 0 1 Unmodified _LDNTLGGTSEVIHR_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.5989 3 504.5986 1510.77397 86361.09 0.52666 0.00026575 0.30671 0.00015476 0.83337 0.00042052 504.598679268989 507.934592315719 51.617 0.42516 51.617 51.337 51.762 0 138 38 5 0 0 0 0.041372 1 28488 19.286 19.286 1 0.73498 0.76515 0 21840000 12246000 9594100 20093 1990 7596 7771 31492 31492 LDNTLGGTSEVIHR 14 0 1 Unmodified _LDNTLGGTSEVIHR_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.5982 3 504.5986 1510.77397 86003.63 0.34346 0.00017331 0.057594 2.9062E-05 0.40105 0.00020237 504.598599605502 507.934518064157 50.078 0.46591 50.078 49.804 50.27 3.8147E-06 157 40 8 0 0 0 3.0456E-05 1 28234 85.42 78.839 1 0.74209 0.79064 0 24462000 12661000 11800000 20094 1990 7596 7771 31493 31493 LDPAASVTGSK 11 1 0 Unmodified _LDPAASVTGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.2805 2 523.279846 1044.54514 82840.36 0.58571 0.00030649 -0.25603 -0.00013397 0.32968 0.00017252 523.279852876588 527.286795296753 37.23 1.3344 37.23 36.731 38.065 0 559 115 9 0 0 0 0.0010065 2 18759 70.808 37.546 1 1.8198 2.1652 0 606760000 222270000 384490000 20095 1569 7597 7772 31494;31495 31495 LDPAASVTGSK 11 1 0 Unmodified _LDPAASVTGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2803 2 523.279846 1044.54514 82773.23 0.68316 0.00035748 -0.44578 -0.00023327 0.23738 0.00012421 523.279781504158 527.286633337896 36.406 1.1923 36.406 35.955 37.147 0 505 96 10 0 0 0 0.00040914 2 18600 80.758 48.438 1 1.732 2.0445 0 991460000 359280000 632190000 20096 1569 7597 7772 31496;31497 31497 LDPAASVTGSK 11 1 0 Unmodified _LDPAASVTGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.2869 2 523.279846 1044.54514 82144.71 0.21114 0.00011048 -0.22516 -0.00011782 -0.014027 -7.3401E-06 523.279953046351 527.286807700469 42.044 1.7903 42.044 41.706 43.497 3.8147E-06 582 126 9 0 0 0 0.0081744 2 19484 51.276 23.102 1 3.3946 2.9437 0 127490000 29055000 98433000 20097 1569 7597 7772 31498;31499 31498 LDPAASVTGSK 11 1 0 Unmodified _LDPAASVTGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.2872 2 523.279846 1044.54514 82536.63 0.03166 1.6567E-05 -0.14451 -7.5617E-05 -0.11285 -5.905E-05 523.280040368226 527.286826145213 42.285 1.7618 42.285 41.884 43.646 -3.8147E-06 589 120 9 0 0 0 0.026442 1 19031 40.715 16.56 1 3.501 2.9852 0 93573000 20988000 72585000 20098 1569 7597 7772 31500 31500 LDPGLALGPGER 12 0 1 Unmodified _LDPGLALGPGER_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063;A0A087X1W5 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.8301 2 597.827495 1193.64044 78972.27 0.7831 0.00046816 1.5219 0.00090986 2.305 0.001378 597.828103343943 602.8332554684 76.385 0.65599 76.385 75.986 76.642 0 138 52 5 0 0 0 0.00020961 2 44992 80.706 70.475 1 0.88621 0.91581 0 23663000 14347000 9316000 20099 371 7598 7773 31501;31502 31501 LDPGSEETQTLVR 13 0 1 Unmodified _LDPGSEETQTLVR_ 0 0 0 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.8727 2 722.867545 1443.72054 NaN NaN NaN 0.14128 0.00010213 NaN NaN NaN NaN 58.481 0.6533 58.481 58.221 58.874 3.8147E-06 0 0 0 0.0025346 1 33063 69.01 39.923 1 NaN NaN 0 44394000 0 44394000 20100 1522 7599 7774 31503 31503 LDPHLVLDQLR 11 0 1 Unmodified _LDPHLVLDQLR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.59 3 440.254105 1317.74048 90305.75 0.21674 9.5419E-05 -0.11859 -5.221E-05 0.098145 4.3209E-05 440.254042325898 443.590083836801 97.833 1.0992 97.833 97.447 98.546 0 514 90 8 0 0 0 0.000219 3 59484 63.727 63.727 1 1.644 1.9176 0 194300000 77016000 117290000 20101 81;1544 7600 7775 31504;31505;31506 31504 LDPHLVLDQLR 11 0 1 Unmodified _LDPHLVLDQLR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.8813 2 659.877519 1317.74048 74551.66 0.82463 0.00054415 -0.32324 -0.0002133 0.50139 0.00033086 659.87705882951 664.881408526787 97.858 0.74028 97.858 97.481 98.222 0 267 60 6 0 0 0 0.00029522 2 59638 88.681 88.681 1 1.4467 1.4799 0 34869000 11709000 23160000 20102 81;1544 7600 7775 31507;31508 31507 LDPHLVLDQLR 11 0 1 Unmodified _LDPHLVLDQLR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.5901 3 440.254105 1317.74048 89635.79 0.52289 0.0002302 -0.55054 -0.00024238 -0.027651 -1.2173E-05 440.253808160258 443.589915837759 96.883 1.0512 96.883 96.537 97.588 0 452 84 9 0 0 0 0.00057149 4 60238 56.087 55.452 1 1.6036 1.8352 0 163090000 61314000 101780000 20103 81;1544 7600 7775 31509;31510;31511;31512 31509 LDPHLVLDQLR 11 0 1 Unmodified _LDPHLVLDQLR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8823 2 659.877519 1317.74048 74992.42 1.0105 0.00066681 -0.52436 -0.00034601 0.48615 0.0003208 659.877050071707 664.881287171543 96.873 0.67229 96.873 96.558 97.231 0 259 53 6 0 0 0 0.00045221 1 60390 77.379 77.379 1 1.4742 1.613 0 33839000 15097000 18742000 20104 81;1544 7600 7775 31513 31513 LDPHLVLDQLR 11 0 1 Unmodified _LDPHLVLDQLR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 440.254 3 440.254105 1317.74048 90662.38 0.13773 6.0636E-05 -0.10289 -4.5297E-05 0.034843 1.534E-05 440.25409709077 443.590104595331 110.27 0.92308 110.27 109.97 110.89 0 200 46 8 0 0 0 0.045693 1 63539 22.781 19.914 1 2.6651 2.2387 0 26521000 7191300 19330000 20105 81;1544 7600 7775 31514 31514 LDPHLVLDQLR 11 0 1 Unmodified _LDPHLVLDQLR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.8821 2 659.877519 1317.74048 75539.27 0.76319 0.00050362 -0.0544 -3.5897E-05 0.70879 0.00046772 659.877648854124 664.881377771336 110.26 0.50647 110.26 109.99 110.49 0 120 27 7 0 0 0 0.023607 1 63654 42.161 42.161 1 2.5184 2.1155 0 9953800 2723400 7230400 20106 81;1544 7600 7775 31515 31515 LDPHLVLDQLR 11 0 1 Unmodified _LDPHLVLDQLR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 440.2536 3 440.254105 1317.74048 90124.23 0.29275 0.00012888 -0.31928 -0.00014057 -0.026535 -1.1682E-05 440.253951263896 443.590010207801 110.06 0.66319 110.06 109.79 110.45 0 182 36 8 0 0 0 0.0028844 2 62503 49.423 39.635 1 2.6395 2.2683 0 21616000 6083000 15533000 20107 81;1544 7600 7775 31516;31517 31517 LDPHPELLPELGSLPPVNT 19 0 0 Unmodified _LDPHPELLPELGSLPPVNT_ 0 0 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1019.5496 2 1019.5464 2037.07826 NaN NaN NaN -0.76371 -0.00077864 NaN NaN NaN NaN 125.89 0.67748 125.89 125.55 126.23 0 0 0 0 0.032941 1 81720 31.639 10.388 1 20108 364 7601 7776 31518 31518 LDPSIFESLQK 11 1 0 Unmodified _LDPSIFESLQK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8431 2 638.84281 1275.67107 76248.73 0.80306 0.00051303 0.87856 0.00056126 1.6816 0.0010743 638.842774599891 642.851179024835 104.55 1.1037 104.55 104.18 105.29 0 431 90 7 0 0 0 2.8462E-12 3 64506 138.08 93.685 1 0.66618 0.74779 0 67564000 40298000 27265000 20109 1076 7602 7777 31519;31520;31521 31519 LDPSIFESLQK 11 1 0 Unmodified _LDPSIFESLQK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8506 2 638.84281 1275.67107 76212.75 0.51881 0.00033144 0.45934 0.00029344 0.97815 0.00062488 638.842880937293 642.850338166251 103.94 1.0556 103.94 103.53 104.58 7.6294E-06 467 89 8 0 0 0 6.3739E-10 2 65663 127.94 95.803 1 0.74208 0.83458 0 72125000 40535000 31590000 20110 1076 7602 7777 31522;31523 31523 LDPSIFESLQK 11 1 0 Unmodified _LDPSIFESLQK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.8433 2 638.84281 1275.67107 75036.08 0.72735 0.00046466 -0.71643 -0.00045768 0.010922 6.9772E-06 638.842358398262 642.849396485535 116.04 1.1209 116.04 115.8 116.92 -7.6294E-06 228 45 9 0 0 0 0.0012626 2 68058 68.847 50.535 1 1.1951 0.94828 0 18909000 8461400 10448000 20111 1076 7602 7777 31524;31525 31525 LDPSIFESLQK 11 1 0 Unmodified _LDPSIFESLQK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.8494 2 638.84281 1275.67107 75793.35 0.88728 0.00056683 -0.81917 -0.00052332 0.068109 4.3511E-05 638.842304729078 642.849387020885 116.01 1.2046 116.01 115.52 116.72 0 259 56 8 0 0 0 0.0025884 2 67012 61.353 44.583 1 1.134 0.91052 0 17853000 8126300 9727100 20112 1076 7602 7777 31526;31527 31526 LDPSPQTIYK 10 1 0 Unmodified _LDPSPQTIYK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;Q3LIE0 D3DQV9 D3DQV9 EIF4G2;AAG1;Nbla00315 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.3187 2 581.311146 1160.60774 81209.12 0.57104 0.00033195 0.40521 0.00023556 0.97625 0.00056751 581.311366381291 585.318460078007 55.717 0.35209 55.717 55.526 55.878 0 98 25 5 0 0 0 0.0035438 2 31291 64.04 46.132 1 2.1906 2.1454 0 22119000 7736900 14382000 20113 1054 7603 7778 31528;31529 31528 LDPSPQTIYK 10 1 0 Unmodified _LDPSPQTIYK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;Q3LIE0 D3DQV9 D3DQV9 EIF4G2;AAG1;Nbla00315 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.3177 2 581.311146 1160.60774 79937.45 0.59434 0.0003455 0.30521 0.00017742 0.89955 0.00052292 581.311248253695 585.31828912551 54.756 0.58316 54.756 54.57 55.153 0 162 49 5 0 0 0 0.007733 1 31340 57.032 28.858 1 1.9821 2.1243 0 22949000 7336900 15612000 20114 1054 7603 7778 31530 31530 LDPVEQGQEDTVAPEVAAEK 20 1 0 Unmodified _LDPVEQGQEDTVAPEVAAEK_ 0 0 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1067.0265 2 1063.01841 2124.02226 59986.55 0.77648 0.00082541 -0.4667 -0.00049611 0.30978 0.0003293 1063.51916789997 1067.02508399421 75.285 0.45013 75.285 75.049 75.499 0 181 36 6 0 0 0 3.2696E-07 2 44135 84.508 84.508 1 1.1751 1.1612 0 25669000 11717000 13952000 20115 2121 7604 7779 31531;31532 31531 LDPVEQGQEDTVAPEVAAEK 20 1 0 Unmodified _LDPVEQGQEDTVAPEVAAEK_ 0 0 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1067.5276 2 1063.01841 2124.02226 58944.55 0.6078 0.0006461 -0.29966 -0.00031855 0.30814 0.00032756 1063.5192788749 1067.52660183205 74.388 0.42319 74.388 74.163 74.586 0 176 35 6 0 0 0 5.4171E-07 2 44863 82.529 77.352 1 1.0734 1.0816 0 27946000 13726000 14220000 20116 2121 7604 7779 31533;31534 31534 LDQDLNEVK 9 1 0 Unmodified _LDQDLNEVK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.2878 2 537.277303 1072.54005 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.047 1 36.047 35.547 36.547 0 0 0 0 0.0031929 1 18183 74.464 21.983 1 20117 803 7605 7780 31535 31535 LDQLIYIPLPDEK 13 1 0 Unmodified _LDQLIYIPLPDEK_ 0 0 0 V9HW80;P55072;Q96IF9;Q0IIN5;Q9NTC4 V9HW80 V9HW80 HEL-S-70;VCP;DKFZp434K0126 Transitional endoplasmic reticulum ATPase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.4335 2 778.932157 1555.84976 NaN NaN NaN -0.46407 -0.00036148 NaN NaN NaN NaN 120.76 0.38203 120.76 120.55 120.93 0 0 0 0 0.00051786 1 77841 83.045 67.474 1 NaN NaN 0 7513000 7513000 0 20118 1613 7606 7781 31536 31536 LDQLIYIPLPDEK 13 1 0 Unmodified _LDQLIYIPLPDEK_ 0 0 0 V9HW80;P55072;Q96IF9;Q0IIN5;Q9NTC4 V9HW80 V9HW80 HEL-S-70;VCP;DKFZp434K0126 Transitional endoplasmic reticulum ATPase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.4352 2 778.932157 1555.84976 70071.27 1.0084 0.00078545 -0.22731 -0.00017706 0.78105 0.00060839 778.931647760812 782.939155644215 120.25 0.42146 120.25 120.06 120.48 0 157 30 7 0 0 0 6.604E-05 2 79395 95.401 95.401 1 1.3047 1.3885 0 20706000 8425900 12280000 20119 1613 7606 7781 31537;31538 31538 LDQLIYIPLPDEK 13 1 0 Unmodified _LDQLIYIPLPDEK_ 0 0 0 V9HW80;P55072;Q96IF9;Q0IIN5;Q9NTC4 V9HW80 V9HW80 HEL-S-70;VCP;DKFZp434K0126 Transitional endoplasmic reticulum ATPase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.9324 2 778.932157 1555.84976 75497.49 1.2153 0.00094663 -0.79696 -0.00062078 0.41833 0.00032585 778.931230271704 782.938419269024 132.95 0.42107 132.95 132.77 133.19 -1.5259E-05 69 19 5 0 0 0 0.0081175 2 80921 44.299 44.299 1 0.98406 0.76416 0 3574000 1798800 1775200 20120 1613 7606 7781 31539;31540 31540 LDQLIYIPLPDEK 13 1 0 Unmodified _LDQLIYIPLPDEK_ 0 0 0 V9HW80;P55072;Q96IF9;Q0IIN5;Q9NTC4 V9HW80 V9HW80 HEL-S-70;VCP;DKFZp434K0126 Transitional endoplasmic reticulum ATPase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 778.9326 2 778.932157 1555.84976 70912.17 1.2123 0.00094431 -0.63021 -0.00049089 0.5821 0.00045342 778.931316197509 783.440545907692 132.75 0.3885 132.75 132.52 132.91 0 70 16 6 0 0 0 0.0023864 2 79797 53.967 53.967 1 0.93232 0.7617 0 4736300 2338000 2398200 20121 1613 7606 7781 31541;31542 31542 LDQLSEIIER 10 0 1 Unmodified _LDQLSEIIER_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.3328 2 608.33261 1214.65067 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.156 1 89.156 88.656 89.656 0 0 0 0 0.0090894 1 53813 58.699 11.88 1 20122 476 7607 7782 31543 31543 LDQPGNLPGSNR 12 0 1 Unmodified _LDQPGNLPGSNR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.3284 2 634.323108 1266.63166 76309.37 0.81458 0.00051671 0.10282 6.5223E-05 0.9174 0.00058193 634.323104573186 639.32739518787 37.388 0.78629 37.388 37.075 37.862 0 382 65 9 0 0 0 1.9874E-08 2 18903 141.88 121.18 1 1.6306 1.9282 0 274160000 111940000 162220000 20123 1569 7608 7783 31544;31545 31544 LDQPGNLPGSNR 12 0 1 Unmodified _LDQPGNLPGSNR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.3286 2 634.323108 1266.63166 76391.16 0.92804 0.00058868 0.14293 9.0663E-05 1.071 0.00067934 634.323213922754 639.327390890502 36.543 0.66333 36.543 36.309 36.972 0 319 51 9 0 0 0 5.0085E-06 2 18705 129.89 111.58 1 1.6181 1.8832 0 418220000 158700000 259510000 20124 1569 7608 7783 31546;31547 31547 LDQPGNLPGSNR 12 0 1 Unmodified _LDQPGNLPGSNR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.3239 2 634.323108 1266.63166 76001.58 0.48582 0.00030817 0.056514 3.5848E-05 0.54233 0.00034401 634.323262179996 639.327291297846 42.639 1.386 42.639 42.324 43.71 0 388 93 9 0 0 0 0.00019395 1 19975 90.653 79.824 1 3.2065 2.76 0 54543000 13609000 40933000 20125 1569 7608 7783 31548 31548 LDQPGNLPGSNR 12 0 1 Unmodified _LDQPGNLPGSNR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.3232 2 634.323108 1266.63166 75005.54 0.26318 0.00016694 0.076545 4.8554E-05 0.33972 0.00021549 634.323308989602 639.327331564515 42.868 1.3321 42.868 42.508 43.84 -3.8147E-06 361 83 9 0 0 0 0.00012849 2 19544 112.13 90.666 1 3.3607 2.9325 0 62043000 14486000 47558000 20126 1569 7608 7783 31549;31550 31550 LDQPGNLPGSNRR 13 0 2 Unmodified _LDQPGNLPGSNRR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.3827 2 712.373663 1422.73277 71152.42 0.34461 0.00024549 -0.06497 -4.6283E-05 0.27964 0.00019921 712.373741314056 722.381971621478 27.037 0.28264 27.037 26.926 27.209 0 74 14 8 0 0 0 0.0004882 2 12305 66.056 39.584 1 2.0667 2.2495 0 68789000 22333000 46456000 20127 1569 7609 7784 31551;31552 31551 LDQPGNLPGSNRR 13 0 2 Unmodified _LDQPGNLPGSNRR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.2516 3 475.251534 1422.73277 87090.3 -0.20375 -9.6833E-05 0.010748 5.108E-06 -0.193 -9.1725E-05 475.251415944811 481.92375454181 27.07 0.48152 27.07 26.835 27.317 0 141 25 10 0 0 0 1.2233E-14 2 12315 111.79 91.33 1 1.8213 1.9872 0 153550000 51768000 101780000 20128 1569 7609 7784 31553;31554 31553 LDQPGNLPGSNRR 13 0 2 Unmodified _LDQPGNLPGSNRR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.3744 2 712.373663 1422.73277 71230.37 0.69196 0.00049294 0.25071 0.0001786 0.94267 0.00067153 712.373865204748 722.382237754806 26.581 0.30481 26.581 26.418 26.723 0 79 15 8 0 0 0 5.6098E-06 2 11928 108.47 80.606 1 1.8843 2.2159 0 137240000 50929000 86313000 20129 1569 7609 7784 31555;31556 31556 LDQPGNLPGSNRR 13 0 2 Unmodified _LDQPGNLPGSNRR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.9241 3 475.251534 1422.73277 86309.13 0.21061 0.0001001 0.01087 5.1658E-06 0.22148 0.00010526 475.251605356377 481.923706870617 26.579 0.40385 26.579 26.418 26.822 -1.9073E-06 116 20 11 0 0 0 2.8063E-05 2 11923 106.49 91.805 1 1.8178 2.1791 0 290560000 109280000 181280000 20130 1569 7609 7784 31557;31558 31557 LDQPGNLPGSNRR 13 0 2 Unmodified _LDQPGNLPGSNRR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.3739 2 712.373663 1422.73277 71600.88 0.56797 0.00040461 -0.19636 -0.00013988 0.37161 0.00026472 712.373605790615 722.381805541947 30.772 0.53874 30.772 30.583 31.122 0 153 33 8 0 0 0 0.053025 1 12802 33.229 25.304 1 3.6257 3.0218 0 16704000 3754700 12949000 20131 1569 7609 7784 31559 31559 LDQPGNLPGSNRR 13 0 2 Unmodified _LDQPGNLPGSNRR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.2515 3 475.251534 1422.73277 86898.8 0.067818 3.2231E-05 -0.15084 -7.1686E-05 -0.08302 -3.9455E-05 475.251634831862 481.923643894675 30.76 0.95139 30.76 30.392 31.343 0 267 60 11 0 0 0 2.425E-06 2 12819 96.745 90.366 1 3.7252 2.9782 0 82649000 17906000 64742000 20132 1569 7609 7784 31560;31561 31561 LDQPGNLPGSNRR 13 0 2 Unmodified _LDQPGNLPGSNRR_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.2519 3 475.251534 1422.73277 86739.43 0.15572 7.4008E-05 -0.01869 -8.8826E-06 0.13703 6.5125E-05 475.25169252224 481.923719580838 30.895 0.86003 30.895 30.626 31.486 1.9073E-06 204 44 10 0 0 0 1.0353E-05 2 12436 80.469 71.87 1 3.3838 3.1756 0 51231000 10877000 40353000 20133 1569 7609 7784 31562;31563 31563 LDQQTLPLGGR 11 0 1 Unmodified _LDQQTLPLGGR_ 0 0 0 A0A0S2Z4W4;Q7Z3D7;A0A0A0MR66;P98175;Q6PKH5;A0A0S2Z4X1 A0A0S2Z4W4 A0A0S2Z4W4 DKFZp686E2459;RBM10 RNA-binding protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.3384 2 599.332944 1196.65134 80698.94 0.63168 0.00037858 0.058296 3.4939E-05 0.68997 0.00041352 599.332383951259 604.336639317469 60.93 0.3328 60.93 60.743 61.076 0 50 22 4 0 0 0 0.021381 1 34803 43.297 30.507 1 1.5786 1.5809 0 9013600 3134600 5879000 20134 464 7610 7785 31564 31564 LDQQTLPLGGR 11 0 1 Unmodified _LDQQTLPLGGR_ 0 0 0 A0A0S2Z4W4;Q7Z3D7;A0A0A0MR66;P98175;Q6PKH5;A0A0S2Z4X1 A0A0S2Z4W4 A0A0S2Z4W4 DKFZp686E2459;RBM10 RNA-binding protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.3376 2 599.332944 1196.65134 80747.6 0.74235 0.00044492 -0.54585 -0.00032715 0.1965 0.00011777 599.332321061515 604.336628148735 59.779 0.29602 59.779 59.6 59.896 -3.8147E-06 72 25 4 0 0 0 0.0031487 1 34837 60.342 60.342 1 1.4225 1.4264 0 9172300 4213200 4959000 20135 464 7610 7785 31565 31565 LDSIVIQQGR 10 0 1 Unmodified _LDSIVIQQGR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8211 2 564.822212 1127.62987 80882.05 0.56008 0.00031635 0.016833 9.5079E-06 0.57691 0.00032585 564.822160118274 569.826257256494 56.695 0.71333 56.695 56.35 57.063 3.8147E-06 339 65 7 0 0 0 1.4673E-05 2 31851 101.72 68.723 1 2.4732 2.756 0 82898000 24087000 58811000 20136 1391 7611 7786 31566;31567 31567 LDSIVIQQGR 10 0 1 Unmodified _LDSIVIQQGR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8226 2 564.822212 1127.62987 80564.13 0.47569 0.00026868 0.13258 7.4885E-05 0.60827 0.00034356 564.822243788946 569.82616633693 55.708 0.94352 55.708 55.388 56.332 0 331 74 6 0 0 0 0.00026989 1 31887 91.783 60.361 1 2.3843 2.7182 0 99420000 28368000 71052000 20137 1391 7611 7786 31568 31568 LDSIVIQQGR 10 0 1 Unmodified _LDSIVIQQGR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.8272 2 564.822212 1127.62987 81061.59 0.69197 0.00039084 -0.062757 -3.5447E-05 0.62921 0.00035539 564.822084057854 569.826274070436 65.338 0.89397 65.338 64.917 65.811 0 282 68 7 0 0 0 0.0048948 2 33661 60.892 43.422 1 4.8842 4.1002 0 10002000 1691600 8310100 20138 1391 7611 7786 31569;31570 31569 LDSIVIQQGR 10 0 1 Unmodified _LDSIVIQQGR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.8264 2 564.822212 1127.62987 81464.61 0.3544 0.00020017 0.17465 9.8646E-05 0.52905 0.00029882 564.822209037409 569.826346578972 65.78 1.0202 65.78 65.369 66.389 0 267 77 6 0 0 0 0.0030553 2 33181 66.27 47.292 1 5.3226 4.4105 0 7870400 1228000 6642300 20139 1391 7611 7786 31571;31572 31571 LDSPAGTALSPSGHTK 16 1 0 Unmodified _LDSPAGTALSPSGHTK_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;Q8TBX0;E2QRB3;E7D7Y0;A0A1B2JLU7 Q2TU78 Q2TU78 PIG45;PYCR1 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.9027 2 769.894094 1537.77364 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.394 1 37.394 36.894 37.894 0 0 0 0 0.019236 1 19031 43.382 28.703 1 20140 259 7612 7787 31573 31573 LDSSAQFGYYFR 12 0 1 Unmodified _LDSSAQFGYYFR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;B4DL39;B4DSB9;B4DN49 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.3453 2 727.340966 1452.66738 73625.76 0.75595 0.00054983 1.0104 0.00073492 1.7664 0.0012848 727.843150570422 732.345666058459 93.637 0.65009 93.637 93.296 93.947 -7.6294E-06 205 56 6 0 0 0 0.00014575 2 56785 93.111 81.891 1 0.82578 0.8531 0 23758000 10957000 12801000 20141 1237 7613 7788 31574;31575 31575 LDSSAQFGYYFR 12 0 1 Unmodified _LDSSAQFGYYFR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;B4DL39;B4DSB9;B4DN49 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.3429 2 727.340966 1452.66738 71352.02 0.70617 0.00051363 0.69724 0.00050713 1.4034 0.0010208 727.341907540107 732.345200926233 92.879 0.61005 92.879 92.522 93.132 0 153 50 4 0 0 0 2.2765E-06 2 57631 111.65 100.82 1 0.92322 0.92416 0 17095000 8331500 8763100 20142 1237 7613 7788 31576;31577 31577 LDSSAQFGYYFR 12 0 1 Unmodified _LDSSAQFGYYFR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;B4DL39;B4DSB9;B4DN49 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.3412 2 727.340966 1452.66738 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.51 1 106.51 106.01 107.01 7.6294E-06 0 0 0 0.03075 1 60023 45.368 31.161 1 20143 1237 7613 7788 31578 31578 LDSVLLLSSMNLPGGELR 18 0 1 Oxidation (M) _LDSVLLLSSM(ox)NLPGGELR_ LDSVLLLSSM(1)NLPGGELR LDSVLLLSSM(48.53)NLPGGELR 0 1 0 Q13868;A3KFL5;A3KFL2;B4E001;A3KFL1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 970.5218 2 965.519333 1929.02411 NaN NaN NaN 0.15149 0.00014627 NaN NaN NaN NaN 129.96 0.28072 129.96 129.81 130.09 0 0 0 0 0.001205 1 78704 48.532 29.256 1 NaN NaN 0 1323500 0 1323500 20144 1722 7614 7789 31579 31579 1557 LDSVPVEEQEEFK 13 1 0 Unmodified _LDSVPVEEQEEFK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4;B1AQT4;E9PP32 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 778.8826 2 774.875036 1547.73552 67686.3 0.68148 0.00052807 0.50212 0.00038908 1.1836 0.00091714 774.875118276881 778.881562321627 81.722 0.61604 81.722 81.4 82.016 0 165 32 8 0 0 0 0.0017989 1 43459 56.359 56.359 1 0.72851 0.59346 0 6732300 3264400 3467800 20145 264 7615 7790 31580 31580 LDTDDLDEIEK 11 1 0 Unmodified _LDTDDLDEIEK_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24;Q9HBZ9;Q7Z4W5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.8172 2 653.306455 1304.59836 NaN NaN NaN -0.63128 -0.00041242 NaN NaN NaN NaN 72.655 0.81583 72.655 72.31 73.126 0 0 0 0 4.7232E-05 1 43617 99.568 67.634 1 NaN NaN 0 13116000 0 13116000 20146 593 7616 7791 31581 31581 LDTDDLDEIEK 11 1 0 Unmodified _LDTDDLDEIEK_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24;Q9HBZ9;Q7Z4W5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3062 2 653.306455 1304.59836 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.635 1 72.635 72.135 73.135 0 0 0 0 6.206E-05 1 43588 82.417 52.944 1 20147 593 7616 7791 31582 31582 LDTDDLDEIEK 11 1 0 Unmodified _LDTDDLDEIEK_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24;Q9HBZ9;Q7Z4W5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.3248 2 653.306455 1304.59836 83167.97 0.75699 0.00049455 -0.36906 -0.00024111 0.38793 0.00025344 653.306592190888 657.3130568822 84.368 0.47536 84.368 84.144 84.619 7.6294E-06 85 35 4 0 0 0 0.049448 1 45201 55.401 55.401 1 2.2825 1.8933 0 1793000 588870 1204100 20148 593 7616 7791 31583 31583 LDTSQWPLLLK 11 1 0 Unmodified _LDTSQWPLLLK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.377 2 657.37682 1312.73909 NaN NaN NaN 0.33576 0.00022072 NaN NaN NaN NaN 116.49 0.85395 116.49 116.05 116.9 0 0 0 0 1.719E-16 1 76167 140.11 111.9 1 NaN NaN 0 63636000 63636000 0 20149 1398 7617 7792 31584 31584 LDTSQWPLLLK 11 1 0 Unmodified _LDTSQWPLLLK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.3845 2 657.37682 1312.73909 75495.94 1.1699 0.00076907 0.023439 1.5408E-05 1.1933 0.00078448 657.376766991495 661.383884119741 128.58 0.81676 128.58 128.24 129.05 0 190 36 8 0 0 0 5.272E-06 2 77646 130.66 98.721 1 0.67971 0.53339 0 16899000 10314000 6584800 20150 1398 7617 7792 31585;31586 31586 LDTSQWPLLLK 11 1 0 Unmodified _LDTSQWPLLLK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.3842 2 657.37682 1312.73909 75819.3 0.86235 0.00056689 -0.1613 -0.00010604 0.70104 0.00046085 657.376627918831 661.383762352361 128.39 0.81874 128.39 128.04 128.86 0 175 33 7 0 0 0 6.3295E-10 2 76571 149.72 109.68 1 0.73004 0.58646 0 15698000 9406100 6292400 20151 1398 7617 7792 31587;31588 31588 LDVGNFSWGSECCTR 15 0 1 Unmodified _LDVGNFSWGSECCTR_ 0 0 0 Q5JR94;P62241 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.8787 2 894.377428 1786.7403 64067.16 0.69898 0.00062515 -0.32708 -0.00029253 0.3719 0.00033262 894.377441864092 899.381576653743 94.208 1.028 94.208 93.842 94.87 0 678 94 10 0 0 0 3.8272E-07 3 57493 104.87 100.85 1 0.56709 0.67044 0 257350000 170120000 87227000 20152 1635 7618 7793 31589;31590;31591 31591 LDVGNFSWGSECCTR 15 0 1 Unmodified _LDVGNFSWGSECCTR_ 0 0 0 Q5JR94;P62241 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.3776 2 894.377428 1786.7403 63806.35 0.52038 0.00046542 -0.12703 -0.00011361 0.39335 0.0003518 894.377615011709 899.381744040353 93.634 0.94598 93.634 93.151 94.097 0 652 83 11 0 0 0 4.9248E-07 3 58349 102.62 101.58 1 0.5758 0.66613 0 269680000 171820000 97858000 20153 1635 7618 7793 31592;31593;31594 31594 LDVGNFSWGSECCTR 15 0 1 Unmodified _LDVGNFSWGSECCTR_ 0 0 0 Q5JR94;P62241 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.3761 2 894.377428 1786.7403 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.174 1 93.174 92.674 93.674 0 0 0 0 0.00086265 1 57806 77.185 70.944 1 20154 1635 7618 7793 31595 31595 LDVGNFSWGSECCTR 15 0 1 Unmodified _LDVGNFSWGSECCTR_ 0 0 0 Q5JR94;P62241 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 894.8794 2 894.377428 1786.7403 63931.54 0.5542 0.00049566 -0.42206 -0.00037748 0.13214 0.00011818 894.377443963456 899.381529789721 107.25 1.6267 107.25 106.93 108.56 0 592 91 12 0 0 0 0.0025807 3 61263 44.511 44.371 1 0.90174 0.7807 0 139420000 71497000 67923000 20155 1635 7618 7793 31596;31597;31598 31597 LDVGNFSWGSECCTR 15 0 1 Unmodified _LDVGNFSWGSECCTR_ 0 0 0 Q5JR94;P62241 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 899.384 2 894.377428 1786.7403 63860.36 0.25954 0.00023212 -0.091174 -8.1544E-05 0.16836 0.00015058 894.377690330376 899.381822905579 107.27 1.6807 107.27 106.83 108.51 7.6294E-06 702 95 11 0 0 0 0.00046312 4 60330 56.951 56.951 1 0.86726 0.75724 0 132990000 70261000 62728000 20156 1635 7618 7793 31599;31600;31601;31602 31600 LDVPEDLR 8 0 1 Unmodified _LDVPEDLR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WY29 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.7604 2 478.756007 955.497461 87311.64 0.11737 5.6192E-05 0.22485 0.00010765 0.34222 0.00016384 478.756015411423 483.760129631923 67.474 1.0669 67.474 67.009 68.076 0 329 88 5 0 0 0 0.040852 1 38794 47.082 34.726 1 1.2018 1.2295 0 32981000 13543000 19438000 20157 1689 7619 7794 31603 31603 LDVPEDLR 8 0 1 Unmodified _LDVPEDLR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WY29 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.7557 2 478.756007 955.497461 NaN NaN NaN 0.20891 0.00010001 NaN NaN NaN NaN 66.607 0.93693 66.607 66.023 66.96 0 0 0 0 0.012683 1 39443 73.248 55.213 1 NaN NaN 0 16258000 16258000 0 20158 1689 7619 7794 31604 31604 LDVPEDLR 8 0 1 Unmodified _LDVPEDLR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WY29 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.7595 2 478.756007 955.497461 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.401 1 66.401 65.901 66.901 0 0 0 0 0.013366 1 39234 72.485 28.038 1 20159 1689 7619 7794 31605 31605 LDVQFSGLTK 10 1 0 Unmodified _LDVQFSGLTK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.3061 2 554.305864 1106.59717 80606.34 0.73303 0.00040633 -0.4842 -0.0002684 0.24883 0.00013793 554.305807240916 558.312896338702 84.843 0.54323 84.843 84.615 85.159 0 211 44 8 0 0 0 1.7214E-08 2 50865 122.44 89.833 1 1.4829 1.6622 0 64902000 25606000 39296000 20160 1504 7620 7795 31606;31607 31607 LDVQFSGLTK 10 1 0 Unmodified _LDVQFSGLTK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.3126 2 554.305864 1106.59717 79746.88 0.98736 0.0005473 -0.24468 -0.00013563 0.74268 0.00041167 554.305912101325 558.313038563554 83.89 0.5009 83.89 83.617 84.118 0 192 43 7 0 0 0 2.0735E-08 2 51371 121.73 89.378 1 1.2851 1.4464 0 121460000 57452000 64006000 20161 1504 7620 7795 31608;31609 31608 LDVSLPFVSR 10 0 1 Unmodified _LDVSLPFVSR_ 0 0 0 Q14676;B4DYH4;A2AB05;A1Z5I7;A1Z5I6 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.8212 2 566.821681 1131.62881 82102.52 0.70866 0.00040168 -0.087054 -4.9344E-05 0.6216 0.00035234 566.821440482404 571.825682011101 112.91 0.51142 112.91 112.65 113.17 0 138 33 6 0 0 0 0.00061581 2 73177 83.998 67.854 1 0.73478 0.72955 0 11932000 6813800 5118400 20162 1738 7621 7796 31610;31611 31610 LDVTLGPVPEIGGSEAPAPQNK 22 1 0 Unmodified _LDVTLGPVPEIGGSEAPAPQNK_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1099.0829 2 1095.07606 2188.13756 58545.86 0.33165 0.00036319 0.17176 0.00018809 0.50342 0.00055128 1095.57773974867 1099.58464458296 109.12 0.68111 109.12 108.85 109.53 0 390 45 12 0 0 0 8.6034E-22 2 68115 116.63 111.74 1 0.93135 1.1028 0 444610000 229540000 215080000 20163 1316 7622 7797 31612;31613 31612 LDVTLGPVPEIGGSEAPAPQNK 22 1 0 Unmodified _LDVTLGPVPEIGGSEAPAPQNK_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1099.0841 2 1095.07606 2188.13756 58732.08 0.080725 8.84E-05 0.1308 0.00014324 0.21153 0.00023164 1095.57772827916 1099.58466380044 108.65 0.75725 108.65 108.37 109.13 7.6294E-06 405 53 12 0 0 0 5.3998E-22 1 69417 119.87 107.51 1 0.95012 1.1183 0 412660000 213760000 198890000 20164 1316 7622 7797 31614 31614 LDVTLGPVPEIGGSEAPAPQNK 22 1 0 Unmodified _LDVTLGPVPEIGGSEAPAPQNK_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1099.585 2 1095.07606 2188.13756 58375.03 -0.026433 -2.8946E-05 0.29197 0.00031973 0.26554 0.00029078 1095.57788031507 1099.58474985626 120.31 0.94804 120.31 119.97 120.91 0 301 43 13 0 0 0 3.1729E-11 2 71255 91.207 84.005 1 1.0031 0.88014 0 212820000 106650000 106170000 20165 1316 7622 7797 31615;31616 31616 LDVTLGPVPEIGGSEAPAPQNK 22 1 0 Unmodified _LDVTLGPVPEIGGSEAPAPQNK_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1100.5449 2 1095.07606 2188.13756 58418.53 0.31166 0.0003413 0.27216 0.00029804 0.58383 0.00063933 1095.57788866055 1099.58471466995 120.13 1.1268 120.13 119.7 120.83 0 335 54 13 0 0 0 3.7404E-11 2 70277 89.624 89.624 1 0.99793 0.86705 0 311210000 156990000 154220000 20166 1316 7622 7797 31617;31618 31618 LDVTTQTPLTPEQLR 15 0 1 Unmodified _LDVTTQTPLTPEQLR_ 0 0 0 Q5JTZ9 Q5JTZ9 Q5JTZ9 AARS2 Alanine--tRNA ligase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.4695 2 856.464884 1710.91521 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.309 1 93.309 92.809 93.809 0 0 0 0 0.02592 1 56586 42.843 27.967 1 20167 1809 7623 7798 31619 31619 LDVTTQTPLTPEQLR 15 0 1 Unmodified _LDVTTQTPLTPEQLR_ 0 0 0 Q5JTZ9 Q5JTZ9 Q5JTZ9 AARS2 Alanine--tRNA ligase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.4708 2 856.464884 1710.91521 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.409 1 93.409 92.909 93.909 0 0 0 0 0.0063588 1 56663 51.841 28.615 1 20168 1809 7623 7798 31620 31620 LDVTTQTPLTPEQLR 15 0 1 Unmodified _LDVTTQTPLTPEQLR_ 0 0 0 Q5JTZ9 Q5JTZ9 Q5JTZ9 AARS2 Alanine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.464 2 856.464884 1710.91521 68349.36 0.67159 0.00057519 -0.24268 -0.00020785 0.4289 0.00036734 856.464937486273 861.468456243566 92.738 0.24327 92.738 92.578 92.821 0 36 18 4 0 0 0 0.0012904 3 57438 62.408 54.103 1 1.0477 1.0542 0 9314600 3222100 6092500 20169 1809 7623 7798 31621;31622;31623 31623 LDYEDIIDDLPCR 13 0 1 Unmodified _LDYEDIIDDLPCR_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;H0YH26 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.8806 2 818.879795 1635.74504 67686.03 0.78761 0.00064495 -0.53107 -0.00043488 0.25654 0.00021008 818.879808693214 823.882987345743 117.92 0.45425 117.92 117.69 118.15 0 139 26 7 0 0 0 1.1427E-08 2 75565 113.63 113.63 1 0.79936 0.83597 0 13013000 7755700 5257100 20170 1916 7624 7799 31624;31625 31624 LDYEDIIDDLPCR 13 0 1 Unmodified _LDYEDIIDDLPCR_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;H0YH26 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.3857 2 818.879795 1635.74504 67927.04 0.85397 0.0006993 -1.0104 -0.0008274 -0.15644 -0.0001281 818.879444416849 824.38386863707 117.53 0.49944 117.53 117.24 117.74 0 155 29 8 0 0 0 5.8651E-05 1 77197 96.015 92.161 1 0.8054 0.7974 0 15485000 8252200 7232400 20171 1916 7624 7799 31626 31626 LDYEDIIDDLPCR 13 0 1 Unmodified _LDYEDIIDDLPCR_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;H0YH26 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 818.8813 2 818.879795 1635.74504 68812.57 0.82309 0.00067401 -0.10644 -8.7163E-05 0.71664 0.00058685 818.879757422054 823.883761117673 129.68 0.53885 129.68 129.49 130.02 0 112 24 8 0 0 0 0.00078464 1 78481 60.49 60.49 1 1.3129 1.1283 0 6516300 2588500 3927800 20172 1916 7624 7799 31627 31627 LDYGQHVVAGTPGR 14 0 1 Unmodified _LDYGQHVVAGTPGR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.9241 3 490.588035 1468.74228 86421.94 0.38835 0.00019052 0.2538 0.00012451 0.64215 0.00031503 490.588193644614 493.924227117687 41.04 0.61178 41.04 40.708 41.32 0 255 50 8 0 0 0 3.6482E-05 1 21431 82.102 70.464 1 2.0692 2.2635 0 52603000 19470000 33134000 20173 261 7625 7800 31628 31628 LDYGQHVVAGTPGR 14 0 1 Unmodified _LDYGQHVVAGTPGR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.3832 2 735.378414 1468.74228 NaN NaN NaN 0.61422 0.00045168 NaN NaN NaN NaN 40.92 0.27829 40.92 40.727 41.005 0 0 0 0 4.1355E-05 1 21447 91.62 73.756 1 NaN NaN 0 7615800 0 7615800 20174 261 7625 7800 31629 31629 LDYGQHVVAGTPGR 14 0 1 Unmodified _LDYGQHVVAGTPGR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.588 3 490.588035 1468.74228 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.94 1 40.94 40.44 41.44 0 0 0 0 0.0046911 1 21481 54.537 32.306 1 20175 261 7625 7800 31630 31630 LDYGQHVVAGTPGR 14 0 1 Unmodified _LDYGQHVVAGTPGR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.9239 3 490.588035 1468.74228 85849.05 0.6049 0.00029675 -0.43208 -0.00021198 0.17281 8.4779E-05 490.588007842035 493.923820477724 39.94 0.57962 39.94 39.682 40.261 0 232 49 7 0 0 0 0.00034988 1 21179 55.841 55.841 1 2.08 2.3742 0 92465000 34104000 58361000 20176 261 7625 7800 31631 31631 LDYGQHVVAGTPGR 14 0 1 Unmodified _LDYGQHVVAGTPGR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3787 2 735.378414 1468.74228 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.812 1 39.812 39.312 40.312 0 0 0 0 0.0016221 1 21166 71.176 40.612 1 20177 261 7625 7800 31632 31632 LDYGQHVVAGTPGR 14 0 1 Unmodified _LDYGQHVVAGTPGR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.3835 2 735.378414 1468.74228 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.814 1 39.814 39.314 40.314 -3.8147E-06 0 0 0 1.3031E-33 1 21168 151.66 123.92 1 20178 261 7625 7800 31633 31633 LDYGQHVVAGTPGR 14 0 1 Unmodified _LDYGQHVVAGTPGR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.9243 3 490.588035 1468.74228 87699.53 0.0049293 2.4182E-06 0.24924 0.00012227 0.25417 0.00012469 490.588165425618 493.924211344156 47.478 0.49952 47.478 47.219 47.718 -3.8147E-06 183 36 6 0 0 0 0.00042942 1 23028 53.995 44.207 1 1.4128 1.1807 0 3224100 1266300 1957800 20179 261 7625 7800 31634 31634 LDYGQHVVAGTPGR 14 0 1 Unmodified _LDYGQHVVAGTPGR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.9241 3 490.588035 1468.74228 87897.88 -0.076309 -3.7436E-05 0.24185 0.00011865 0.16554 8.121E-05 490.588277682665 493.9242442691 47.706 0.3989 47.706 47.528 47.927 0 113 28 5 0 0 0 0.027215 1 22661 22.154 16.875 1 1.3556 1.1569 0 3220200 1222000 1998200 20180 261 7625 7800 31635 31635 LDYILGLK 8 1 0 Unmodified _LDYILGLK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.7925 2 467.784036 933.553519 87871.88 0.35662 0.00016682 -0.12355 -5.7794E-05 0.23307 0.00010903 467.783919495878 471.79093953889 96.932 1.4745 96.932 96.406 97.88 0 724 127 9 0 0 0 0.0088018 4 58915 77.058 36.955 1 0.85253 1.002 0 312010000 165120000 146890000 20181 157 7626 7801 31636;31637;31638;31639 31637 LDYILGLK 8 1 0 Unmodified _LDYILGLK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.7913 2 467.784036 933.553519 88052.06 0.41355 0.00019345 -0.18938 -8.859E-05 0.22416 0.00010486 467.783880683677 471.790916690904 96.005 2.1061 96.005 95.506 97.613 0 789 175 8 0 0 0 0.0083247 6 60126 79.116 37.614 1 0.89926 1.0603 0 703760000 371150000 332610000 20182 157 7626 7801 31640;31641;31642;31643;31644;31645 31643 LDYILGLK 8 1 0 Unmodified _LDYILGLK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.7909 2 467.784036 933.553519 87460.34 0.37832 0.00017697 -0.18364 -8.5903E-05 0.19468 9.1067E-05 467.783858332306 471.790934120247 109.72 2.0844 109.72 109.33 111.41 0 410 99 8 0 0 0 0.023396 2 63072 56.547 19.526 1 0.85773 0.73463 0 74297000 39133000 35163000 20183 157 7626 7801 31646;31647 31646 LDYILGLK 8 1 0 Unmodified _LDYILGLK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.7839 2 467.784036 933.553519 87565.06 0.44281 0.00020714 -0.20019 -9.3645E-05 0.24263 0.0001135 467.783864265405 471.790892334217 109.63 1.6793 109.63 109.18 110.86 0 381 84 8 0 0 0 0.014589 2 62082 62.659 30.723 1 0.85969 0.71965 0 45518000 25256000 20262000 20184 157 7626 7801 31648;31649 31649 LDYLGVSYGLTPR 13 0 1 Unmodified _LDYLGVSYGLTPR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8942 2 727.387916 1452.76128 70169.69 0.75653 0.00055029 0.16302 0.00011858 0.91956 0.00066887 727.388037579215 732.392041092393 105.22 1.0858 105.22 104.79 105.88 0 541 85 9 0 0 0 1.0249E-08 3 64911 114.83 88.895 1 0.88592 1.0359 0 204320000 101350000 102970000 20185 2023 7627 7802 31650;31651;31652 31651 LDYLGVSYGLTPR 13 0 1 Unmodified _LDYLGVSYGLTPR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.3933 2 727.387916 1452.76128 70650.53 0.85702 0.00062338 0.12764 9.2841E-05 0.98465 0.00071623 727.387990448524 732.392011049173 104.53 1.1544 104.53 104.08 105.23 0 573 90 10 0 0 0 0.00015017 3 66023 87.363 68.12 1 0.885 1.0195 0 221270000 106350000 114920000 20186 2023 7627 7802 31653;31654;31655 31654 LDYLGVSYGLTPR 13 0 1 Unmodified _LDYLGVSYGLTPR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.3888 2 727.387916 1452.76128 69855.83 0.49631 0.00036101 0.44573 0.00032422 0.94204 0.00068523 727.388255928092 732.392231477144 116.57 1.2803 116.57 116.23 117.51 7.6294E-06 300 54 11 0 0 0 9.3162E-06 2 68390 100.93 67.706 1 1.3226 1.1446 0 130840000 57672000 73173000 20187 2023 7627 7802 31656;31657 31657 LDYLGVSYGLTPR 13 0 1 Unmodified _LDYLGVSYGLTPR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.3922 2 727.387916 1452.76128 70875.03 0.87251 0.00063465 0.18076 0.00013148 1.0533 0.00076614 727.38814638663 732.392052186884 116.46 0.97762 116.46 116.1 117.08 7.6294E-06 314 44 12 0 0 0 0.00015631 1 67450 86.014 66.024 1 1.3513 1.1798 0 117100000 52733000 64363000 20188 2023 7627 7802 31658 31658 LEAAEDIAYQLSR 13 0 1 Unmodified _LEAAEDIAYQLSR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8819 2 739.877913 1477.74127 NaN NaN NaN -0.050501 -3.7365E-05 NaN NaN NaN NaN 92.78 1.2303 92.78 92.369 93.599 0 0 0 0 0.00056158 1 57310 82.171 63.426 1 NaN NaN 0 149490000 0 149490000 20189 730 7628 7803 31659 31659 LEAAEDIAYQLSR 13 0 1 Unmodified _LEAAEDIAYQLSR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.8822 2 739.877913 1477.74127 71457.61 0.69777 0.00051626 0.016626 1.2301E-05 0.7144 0.00052857 739.878020560629 744.881608944999 107.01 0.87368 107.01 106.7 107.58 0 262 57 7 0 0 0 0.00018657 1 60343 71.153 45.857 1 1.5823 1.2804 0 11669000 3721300 7948200 20190 730 7628 7803 31660 31660 LEAAIAEAEER 11 0 1 Unmodified _LEAAIAEAEER_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.3069 2 601.306592 1200.59863 77428.55 0.88253 0.00053067 0.21617 0.00012998 1.0987 0.00066066 601.306756037259 606.310791893059 49.381 0.62062 49.381 49.158 49.779 -3.8147E-06 218 39 8 0 0 0 0.00071156 1 27308 73.067 52.737 1 1.1006 1.2866 0 203340000 97230000 106110000 + 20191 1171;1158 7629 7804 31661 31661 LEAAIAEAEER 11 0 1 Unmodified _LEAAIAEAEER_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.3104 2 601.306592 1200.59863 77774.8 0.56265 0.00033832 0.0039175 2.3556E-06 0.56656 0.00034068 601.306409167829 606.310762040974 48.03 0.58486 48.03 47.837 48.422 0 206 40 8 0 0 0 4.4461E-10 2 26737 130.98 88.874 1 0.99739 1.1451 0 189090000 94536000 94551000 + 20192 1171;1158 7629 7804 31662;31663 31662 LEAAIAEAEER 11 0 1 Unmodified _LEAAIAEAEER_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.3067 2 601.306592 1200.59863 78161.8 0.58342 0.00035081 0.43891 0.00026392 1.0223 0.00061473 601.306863884556 606.812316072888 57.024 0.69094 57.024 56.798 57.489 3.8147E-06 161 50 5 0 0 0 0.00016552 1 28815 94.297 65.21 1 0.92397 0.79444 0 6723500 4602900 2120600 + 20193 1171;1158 7629 7804 31664 31664 LEAAIAEAEER 11 0 1 Unmodified _LEAAIAEAEER_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.3068 2 601.306592 1200.59863 77884.58 0.62519 0.00037593 -0.016949 -1.0191E-05 0.60825 0.00036574 601.306803419745 606.310944133892 57.52 1.084 57.52 57.032 58.116 0 235 73 7 0 0 0 0.00024892 2 28480 90.685 61.598 1 1.0929 0.9068 0 5525400 2819000 2706400 + 20194 1171;1158 7629 7804 31665;31666 31666 LEAAIAEAEERGELALK 17 1 1 Unmodified _LEAAIAEAEERGELALK_ 0 0 1 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.9962 3 604.994907 1811.96289 NaN NaN NaN -0.16477 -9.9687E-05 NaN NaN NaN NaN 87.934 0.43867 87.934 87.839 88.278 0 0 0 0 9.5017E-05 1 53038 57.173 32.238 1 NaN NaN 0 11851000 11851000 0 + 20195 1171;1158 7630 7805 31667 31667 LEAAIAEAEERGELALK 17 1 1 Unmodified _LEAAIAEAEERGELALK_ 0 0 1 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.9955 3 604.994907 1811.96289 80530.08 0.41647 0.00025196 0.14237 8.6133E-05 0.55884 0.0003381 605.329551641018 611.00216551578 86.621 0.59341 86.621 86.311 86.905 0 143 50 4 0 0 0 0.0099777 1 53389 24.3 14.551 1 1.0604 1.2077 0 19447000 9833200 9614200 + 20196 1171;1158 7630 7805 31668 31668 LEAAIAEAEERGELALK 17 1 1 Unmodified _LEAAIAEAEERGELALK_ 0 0 1 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.3296 3 604.994907 1811.96289 79459.1 0.33102 0.00020026 0.28716 0.00017373 0.61818 0.00037399 605.329240996813 611.002878901741 100.86 0.67038 100.86 100.71 101.38 -7.6294E-06 241 46 7 0 0 0 0.0026575 1 57107 34.498 16.581 1 0.97166 0.82599 0 9019800 4087900 4931900 + 20197 1171;1158 7630 7805 31669 31669 LEAAIAEAEERGELALK 17 1 1 Unmodified _LEAAIAEAEERGELALK_ 0 0 1 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.3289 3 604.994907 1811.96289 78336.52 0.43646 0.00026406 -0.068273 -4.1305E-05 0.36819 0.00022275 604.994852535314 611.002792297408 100.74 0.7107 100.74 100.56 101.27 0 211 50 6 0 0 0 0.007429 1 56190 27.85 9.4861 1 0.9631 0.81493 0 11566000 6575100 4991200 + 20198 1171;1158 7630 7805 31670 31670 LEAALGEAK 9 1 0 Unmodified _LEAALGEAK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2604 2 451.2531 900.491647 90019.96 0.042866 1.9343E-05 0.14047 6.3389E-05 0.18334 8.2732E-05 451.252822784619 455.260428865811 34.24 1.171 34.24 33.692 34.863 0 411 104 6 0 0 0 0.0011834 2 17177 88.819 21.339 1 1.3428 1.5216 0 91934000 36979000 54955000 20199 1440 7631 7806 31671;31672 31672 LEAALGEAK 9 1 0 Unmodified _LEAALGEAK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 455.2614 2 451.2531 900.491647 91838.03 0.0075098 3.3888E-06 0.17103 7.7179E-05 0.17854 8.0568E-05 451.253152314009 455.260236844518 39.022 1.833 39.022 37.889 39.722 0 383 144 6 0 0 0 0.018227 1 17688 52.255 15.86 1 1.4782 1.1855 0 8229700 3299300 4930400 20200 1440 7631 7806 31673 31673 LEAALGEAK 9 1 0 Unmodified _LEAALGEAK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 451.2522 2 451.2531 900.491647 91217.92 -0.19245 -8.6845E-05 0.32111 0.0001449 0.12866 5.8057E-05 451.253075936462 455.260374037297 39.015 0.99361 39.015 38.621 39.614 0 239 75 5 0 0 0 0.012314 2 17217 57.59 21.194 1 1.4455 1.1762 0 7140000 2889100 4250900 20201 1440 7631 7806 31674;31675 31675 LEAALGEAKK 10 2 0 Unmodified _LEAALGEAKK_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.3149 2 515.300581 1028.58661 84481.88 0.37679 0.00019416 -0.50606 -0.00026077 -0.12927 -6.6611E-05 515.300141526686 523.314473776628 25.534 0.30153 25.534 25.381 25.683 -1.9073E-06 53 12 6 0 0 0 0.044411 1 8823 44.203 13.949 1 1.4265 1.2517 0 1782100 667210 1114900 20202 1440 7632 7807 31676 31676 LEAATQQNQQLR 12 0 1 Unmodified _LEAATQQNQQLR_ 0 0 0 Q08379 Q08379 Q08379 GOLGA2 Golgin subfamily A member 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.3687 2 700.368047 1398.72154 NaN NaN NaN 0.32659 0.00022873 NaN NaN NaN NaN 25.295 0.23943 25.295 25.153 25.393 -1.9073E-06 0 0 0 1.1491E-20 1 10937 157.66 122.44 1 NaN NaN 0 9527500 9527500 0 20203 1692 7633 7808 31677 31677 LEAATQQNQQLR 12 0 1 Unmodified _LEAATQQNQQLR_ 0 0 0 Q08379 Q08379 Q08379 GOLGA2 Golgin subfamily A member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.3719 2 700.368047 1398.72154 73539.18 0.18057 0.00012646 0.32671 0.00022882 0.50728 0.00035528 700.368406653323 705.372066123716 29.077 0.32111 29.077 28.877 29.198 0 54 18 4 0 0 0 0.041943 1 11204 33.961 33.961 1 0.78708 0.6832 0 1232200 612790 619380 20204 1692 7633 7808 31678 31678 LEAEGVPEVSEK 12 1 0 Unmodified _LEAEGVPEVSEK_ 0 0 0 A0A140VJK1;O76003 A0A140VJK1 A0A140VJK1 GLRX3 Glutaredoxin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.3369 2 643.827357 1285.64016 72963.95 0.38079 0.00024517 1.1945 0.00076904 1.5753 0.0010142 643.8273788721 647.835097617961 53.043 0.4641 53.043 52.824 53.289 0 104 35 5 0 0 0 0.0050534 1 29541 51.927 51.927 1 5.5454 5.4407 0 22805000 2978900 19826000 20205 602 7634 7809 31679 31679 LEAEGVPEVSEK 12 1 0 Unmodified _LEAEGVPEVSEK_ 0 0 0 A0A140VJK1;O76003 A0A140VJK1 A0A140VJK1 GLRX3 Glutaredoxin-3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.8356 2 643.827357 1285.64016 NaN NaN NaN 0.60479 0.00038938 NaN NaN NaN NaN 61.755 0.47058 61.755 61.554 62.025 3.8147E-06 0 0 0 0.029083 1 31664 47.894 26.992 1 NaN NaN 0 891520 0 891520 20206 602 7634 7809 31680 31680 LEAEGVPEVSEK 12 1 0 Unmodified _LEAEGVPEVSEK_ 0 0 0 A0A140VJK1;O76003 A0A140VJK1 A0A140VJK1 GLRX3 Glutaredoxin-3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.8349 2 643.827357 1285.64016 NaN NaN NaN 0.071356 4.5941E-05 NaN NaN NaN NaN 62.436 0.40971 62.436 62.184 62.594 -3.8147E-06 0 0 0 0.032071 2 31361 46.796 29.36 1 NaN NaN 0 1013000 0 1013000 20207 602 7634 7809 31681;31682 31682 LEAEIATYR 9 0 1 Unmodified _LEAEIATYR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.2823 2 533.282389 1064.55022 81576.01 0.61371 0.00032728 -0.016817 -8.9685E-06 0.59689 0.00031831 533.282462819114 538.286324299749 54.287 0.92404 54.287 53.831 54.756 0 477 79 9 0 0 0 3.7378E-12 2 30363 160.26 123.11 1 0.97329 1.1546 0 665440000 327440000 338000000 + 20208 316;1155 7635 7810 31683;31684 31684 LEAEIATYR 9 0 1 Unmodified _LEAEIATYR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.2862 2 533.282389 1064.55022 82565.88 0.093197 4.97E-05 0.14528 7.7473E-05 0.23847 0.00012717 533.282488922475 538.286452194666 53.087 1.1664 53.087 52.552 53.718 0 640 103 9 0 0 0 1.5383E-05 2 30196 122.19 96.248 1 1.0218 1.1864 0 345840000 165040000 180800000 + 20209 316;1155 7635 7810 31685;31686 31685 LEAEIATYR 9 0 1 Unmodified _LEAEIATYR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.2824 2 533.282389 1064.55022 81960.2 0.26425 0.00014092 0.20085 0.00010711 0.4651 0.00024803 533.282756932039 538.286404896655 63.06 1.537 63.06 62.466 64.003 0 497 133 6 0 0 0 0.0087237 3 32278 60.828 49.317 1 1.2585 1.0393 0 19056000 8972700 10083000 + 20210 316;1155 7635 7810 31687;31688;31689 31688 LEAEIATYR 9 0 1 Unmodified _LEAEIATYR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.287 2 533.282389 1064.55022 81997.73 0.26539 0.00014153 0.25185 0.0001343 0.51724 0.00027583 533.282734098106 538.286421893839 63.607 1.429 63.607 63.102 64.531 -3.8147E-06 543 125 7 0 0 0 0.015205 3 32199 54.982 50.805 1 1.2517 1.0511 0 17001000 7273000 9728000 + 20211 316;1155 7635 7810 31690;31691;31692 31692 LEAELGNMQGLVEDFK 16 1 0 Oxidation (M) _LEAELGNM(ox)QGLVEDFK_ LEAELGNM(1)QGLVEDFK LEAELGNM(102.87)QGLVEDFK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;H0YIB2 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.9422 2 904.940384 1807.86622 62826.54 0.86001 0.00077826 -0.3587 -0.0003246 0.50131 0.00045366 905.441420404923 908.947376862407 96.68 0.97926 96.68 96.265 97.244 0 488 85 10 0 0 0 8.3616E-09 2 58756 102.87 93.684 1 1.4741 1.6814 0 175840000 70520000 105320000 + 20212 1156 7636 7811 31693;31694 31693 864 LEAELGNMQGLVEDFK 16 1 0 Oxidation (M) _LEAELGNM(ox)QGLVEDFK_ LEAELGNM(1)QGLVEDFK LEAELGNM(117.07)QGLVEDFK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;H0YIB2 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 908.9484 2 904.940384 1807.86622 62886.3 0.67395 0.00060989 -0.19809 -0.00017926 0.47587 0.00043063 904.940323553798 909.448834143639 96.095 1.1183 96.095 95.623 96.742 7.6294E-06 646 95 10 0 0 0 1.9941E-12 3 60072 117.07 98.804 1 1.5287 1.7808 0 248790000 96562000 152230000 + 20213 1156 7636 7811 31695;31696;31697 31696 864 LEAELGNMQGLVEDFK 16 1 0 Oxidation (M) _LEAELGNM(ox)QGLVEDFK_ LEAELGNM(1)QGLVEDFK LEAELGNM(58.1)QGLVEDFK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;H0YIB2 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 908.9484 2 904.940384 1807.86622 61833.85 0.55858 0.00050548 0.13819 0.00012506 0.69677 0.00063054 904.940659914848 908.947221743084 110.08 0.93364 110.08 109.66 110.6 -7.6294E-06 224 49 8 0 0 0 0.00011547 1 63412 58.098 52.253 1 1.0723 0.8425 0 11239000 5682300 5556500 + 20214 1156 7636 7811 31698 31698 864 LEAELGNMQGLVEDFK 16 1 0 Oxidation (M) _LEAELGNM(ox)QGLVEDFK_ LEAELGNM(1)QGLVEDFK LEAELGNM(84.17)QGLVEDFK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;H0YIB2 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 908.9484 2 904.940384 1807.86622 61045.55 0.51079 0.00046224 0.54819 0.00049608 1.059 0.00095832 905.442589449975 908.947161634141 109.92 1.0718 109.92 109.57 110.64 -7.6294E-06 261 56 8 0 0 0 2.1E-05 2 62421 84.169 78.324 1 1.099 0.90405 0 10172000 5376900 4795400 + 20215 1156 7636 7811 31699;31700 31700 864 LEAELGNMQGLVEDFK 16 1 0 Unmodified _LEAELGNMQGLVEDFK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;H0YIB2 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 897.4448 2 896.942927 1791.8713 62543.08 0.51276 0.00045991 -0.11362 -0.00010191 0.39914 0.000358 897.444212720664 900.950194375671 129.96 0.70883 129.96 129.65 130.35 0 216 32 10 0 0 0 0.00012652 3 78636 77.279 77.279 1 1.9991 1.5711 0 17148000 5673700 11474000 + 20216 1156 7636 7812 31701;31702;31703 31702 LEAELGNMQGLVEDFK 16 1 0 Unmodified _LEAELGNMQGLVEDFK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;H0YIB2 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 901.4539 2 896.942927 1791.8713 63052.82 0.63164 0.00056654 0.31676 0.00028411 0.94839 0.00085065 896.942819973509 900.950557229531 129.83 0.89148 129.83 129.38 130.27 0 141 27 10 0 0 0 5.7666E-12 2 77603 113.77 113.77 1 1.9272 1.5426 0 21064000 7688800 13375000 + 20217 1156 7636 7812 31704;31705 31704 LEAELR 6 0 1 Unmodified _LEAELR_ 0 0 0 CON__Q3KNV1;P08729;CON__O95678;O95678 CON__Q3KNV1;CON__O95678 CON__Q3KNV1 KRT7;KRT75 Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 365.7084 2 365.708328 729.402104 99162.34 0.30543 0.0001117 0.07796 2.8511E-05 0.38339 0.00014021 365.708154179088 370.712412993963 29.552 0.63495 29.552 29.218 29.853 0 138 49 5 0 0 0 0.034838 1 14236 126.68 0 1 1.0194 1.1689 0 82041000 42502000 39539000 + 20218 1171;1147 7637 7813 31706 31706 LEAFHER 7 0 1 Unmodified _LEAFHER_ 0 0 0 Q14151 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.2339 2 451.229959 900.445365 90799.66 0.35795 0.00016152 -0.15145 -6.8339E-05 0.2065 9.3178E-05 451.229859467967 456.234110248835 22.722 0.26587 22.722 22.603 22.869 0 55 15 5 0 0 0 0.033678 1 8733 63.565 38.567 1 1.4542 1.5044 0 6045100 2873900 3171200 20219 1727 7638 7814 31707 31707 LEAFHER 7 0 1 Unmodified _LEAFHER_ 0 0 0 Q14151 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.23 2 451.229959 900.445365 88925.87 -0.18953 -8.5523E-05 -0.11936 -5.386E-05 -0.30889 -0.00013938 451.230157440012 456.234058015405 22.273 0.35217 22.273 22.084 22.436 -1.9073E-06 45 16 5 0 0 0 0.028805 1 8314 71.342 44.222 1 1.1144 1.0937 0 13784000 6261700 7522100 20220 1727 7638 7814 31708 31708 LEAIEDDSVK 10 1 0 Unmodified _LEAIEDDSVK_ 0 0 0 A6NJA2;D3DUG9;B2RD79;P54578;B3KTG4 A6NJA2 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.7906 2 559.782418 1117.55028 NaN NaN NaN 1.3562 0.00075915 NaN NaN NaN NaN 42.496 0.47676 42.496 42.317 42.794 -3.8147E-06 0 0 0 0.0024035 1 22590 80.688 31.27 1 NaN NaN 0 21324000 0 21324000 20221 686 7639 7815 31709 31709 LEAIEDDSVK 10 1 0 Unmodified _LEAIEDDSVK_ 0 0 0 A6NJA2;D3DUG9;B2RD79;P54578;B3KTG4 A6NJA2 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.7897 2 559.782418 1117.55028 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.798 1 41.798 41.298 42.298 0 0 0 0 0.00014589 1 22492 80.688 31.27 1 20222 686 7639 7815 31710 31710 LEAIITPPPAK 11 1 0 Unmodified _LEAIITPPPAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.8529 2 575.347532 1148.68051 80360.64 0.71054 0.00040881 -0.16245 -9.3464E-05 0.54809 0.00031534 575.347382884974 579.35446725013 75.216 1.3111 75.216 74.551 75.862 0 607 111 8 0 0 0 3.7938E-10 4 44154 132.01 114.1 1 0.95395 1.1126 0 269070000 142670000 126400000 20223 1401 7640 7816 31711;31712;31713;31714 31713 LEAIITPPPAK 11 1 0 Unmodified _LEAIITPPPAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3545 2 575.347532 1148.68051 79768.22 0.61157 0.00035186 -0.056493 -3.2503E-05 0.55508 0.00031936 575.347490018631 579.354492676953 74.044 1.0891 74.044 73.497 74.586 0 586 91 9 0 0 0 0.00042966 2 44181 79.148 72.643 1 0.9852 1.1533 0 305460000 156740000 148720000 20224 1401 7640 7816 31715;31716 31715 LEAIITPPPAK 11 1 0 Unmodified _LEAIITPPPAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.3546 2 575.347532 1148.68051 79535.41 0.43522 0.0002504 0.071723 4.1265E-05 0.50694 0.00029167 575.347507608306 579.354582485718 85.471 1.6109 85.471 84.92 86.531 0 507 107 8 0 0 0 0.0020494 4 47004 62.823 62.823 1 0.97088 0.78891 0 28455000 14619000 13835000 20225 1401 7640 7816 31717;31718;31719;31720 31719 LEAIITPPPAK 11 1 0 Unmodified _LEAIITPPPAK_ 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.3549 2 575.347532 1148.68051 79308.28 0.50766 0.00029208 0.13398 7.7084E-05 0.64164 0.00036916 575.347534349329 579.354630017835 85.435 1.393 85.435 84.985 86.378 0 461 82 8 0 0 0 0.0023522 2 45734 61.78 58.371 1 0.98382 0.81025 0 28925000 14935000 13991000 20226 1401 7640 7816 31721;31722 31721 LEALAILLQK 10 1 0 Unmodified _LEALAILLQK_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.3579 2 556.357899 1110.70125 89537.94 0.92034 0.00051204 -0.1584 -8.8128E-05 0.76194 0.00042391 556.357680245406 560.364734055295 115.92 0.35913 115.92 115.74 116.1 0 43 20 4 0 0 0 0.00078342 2 73841 81.296 74.706 1 0.65866 0.72588 0 2944100 1393100 1551000 20227 1977 7641 7817 31723;31724 31723 LEALAILLQK 10 1 0 Unmodified _LEALAILLQK_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.358 2 556.357899 1110.70125 NaN NaN NaN -0.36852 -0.00020503 NaN NaN NaN NaN 115.3 0.40373 115.3 115.09 115.5 0 0 0 0 0.013209 1 75156 60.019 60.019 1 NaN NaN 0 1841000 1841000 0 20228 1977 7641 7817 31725 31725 LEALPQVESQVAAAR 15 0 1 Unmodified _LEALPQVESQVAAAR_ 0 0 0 E7EV89;B4DVX3;B4DVM9;P29375 E7EV89 E7EV89 KDM5A Lysine-specific demethylase 5A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.4319 2 791.433387 1580.85222 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.726 1 85.726 85.226 86.226 -7.6294E-06 0 0 0 0.010607 1 52797 47.288 32.608 1 20229 1040 7642 7818 31726 31726 LEALSVK 7 1 0 Unmodified _LEALSVK_ 0 0 0 A0A140VK94;F6WQW2;P43487;C9JXG8;D3DX26;Q5T0Z6;Q9C010 A0A140VK94 A0A140VK94 RANBP1;PKIB Ran-specific GTPase-activating protein;cAMP-dependent protein kinase inhibitor beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 384.2411 2 380.234179 758.453805 98991.09 -0.13174 -5.0092E-05 0.96762 0.00036792 0.83588 0.00031783 380.234583258163 384.241512230194 43.316 0.37688 43.316 43.096 43.473 0 126 31 6 0 0 0 0.031506 1 23088 67.032 18.858 1 4.1145 4.471 0 47062000 10843000 36219000 20230 621 7643 7819 31727 31727 LEALSVK 7 1 0 Unmodified _LEALSVK_ 0 0 0 A0A140VK94;F6WQW2;P43487;C9JXG8;D3DX26;Q5T0Z6;Q9C010 A0A140VK94 A0A140VK94 RANBP1;PKIB Ran-specific GTPase-activating protein;cAMP-dependent protein kinase inhibitor beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 384.2415 2 380.234179 758.453805 102105.5 0.23338 8.8739E-05 0.37851 0.00014392 0.61189 0.00023266 380.234121616953 384.241333575827 42.167 0.83869 42.167 41.844 42.682 0 184 74 6 0 0 0 0.031506 1 22610 67.032 16.066 1 4.3847 4.4575 0 30212000 7000100 23212000 20231 621 7643 7819 31728 31728 LEAQEQAFLAR 11 0 1 Unmodified _LEAQEQAFLAR_ 0 0 0 Q5T3I0;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.3384 2 638.338227 1274.6619 75284.16 0.42059 0.00026848 0.20715 0.00013223 0.62774 0.00040071 638.338277593269 643.342523930281 65.186 1.2137 65.186 64.801 66.015 0 488 109 7 0 0 0 2.9879E-23 2 37490 172.23 172.23 1 1.1644 1.3052 0 90870000 41180000 49690000 20232 1820 7644 7820 31729;31730 31730 LEAQEQAFLAR 11 0 1 Unmodified _LEAQEQAFLAR_ 0 0 0 Q5T3I0;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.342 2 638.338227 1274.6619 75789.84 0.54585 0.00034844 0.064405 4.1112E-05 0.61026 0.00038955 638.338353304664 643.342480914063 63.976 1.4181 63.976 63.437 64.855 0 539 129 8 0 0 0 0.00015639 2 37509 94.692 89.08 1 1.2111 1.3784 0 112770000 50728000 62044000 20233 1820 7644 7820 31731;31732 31731 LEAQEQAFLAR 11 0 1 Unmodified _LEAQEQAFLAR_ 0 0 0 Q5T3I0;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.3384 2 638.338227 1274.6619 76319.8 0.64064 0.00040894 -0.33529 -0.00021403 0.30535 0.00019491 638.338310609954 643.342383572568 74.971 1.5167 74.971 74.586 76.103 0 470 109 10 0 0 0 0.00013603 1 39867 95.573 95.573 1 2.1064 1.8047 0 41006000 13066000 27939000 20234 1820 7644 7820 31733 31733 LEAQEQAFLAR 11 0 1 Unmodified _LEAQEQAFLAR_ 0 0 0 Q5T3I0;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.3387 2 638.338227 1274.6619 76242.93 0.47762 0.00030488 -0.5393 -0.00034426 -0.061684 -3.9375E-05 638.338263354176 643.342384979912 75.337 1.3495 75.337 74.918 76.268 0 549 94 10 0 0 0 1.845E-05 2 39247 105.52 105.52 1 2.2542 1.9663 0 33381000 11799000 21582000 20235 1820 7644 7820 31734;31735 31735 LECQDIINK 9 1 0 Unmodified _LECQDIINK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.7957 2 566.786981 1131.55941 85301.21 0.68743 0.00038963 0.47565 0.00026959 1.1631 0.00065922 566.787211768091 570.794532542773 40.558 0.49117 40.558 40.305 40.796 0 78 38 4 0 0 0 0.008633 2 21669 60.91 27.114 1 1.0123 1.0453 0 11461000 5005300 6455300 20236 1795 7645 7821 31736;31737 31737 LECQDIINK 9 1 0 Unmodified _LECQDIINK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.7947 2 566.786981 1131.55941 80200.02 0.32637 0.00018498 0.74411 0.00042175 1.0705 0.00060673 566.787367028755 570.794558927604 47.719 0.73187 47.719 47.299 48.031 3.8147E-06 121 50 4 0 0 0 0.0022437 1 23123 74.92 50.765 1 2.3085 1.9364 0 1621500 593670 1027900 20237 1795 7645 7821 31738 31738 LECVEPNCR 9 0 1 Unmodified _LECVEPNCR_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.7604 2 588.76044 1175.50633 73669.07 0.43848 0.00025816 -1.0113 -0.00059542 -0.57283 -0.00033726 588.760612521359 593.764238501418 26.632 1.3521 26.632 26.242 27.594 0 436 80 12 0 0 0 2.3179E-05 3 11894 115.49 69.542 1 0.71071 0.84658 0 2057800000 1183800000 873960000 20238 830 7646 7822 31739;31740;31741 31740 LECVEPNCR 9 0 1 Unmodified _LECVEPNCR_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.7606 2 588.76044 1175.50633 72521.66 0.39511 0.00023262 -0.9333 -0.00054949 -0.53819 -0.00031687 588.760766194457 593.764257821025 26.314 1.1407 26.314 25.893 27.034 0 367 59 12 0 0 0 1.0903E-07 2 11628 138.54 90.696 1 0.7179 0.85534 0 2773000000 1645200000 1127900000 20239 830 7646 7822 31742;31743 31742 LECVEPNCR 9 0 1 Unmodified _LECVEPNCR_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.7612 2 588.76044 1175.50633 NaN NaN NaN 0.063066 3.7131E-05 NaN NaN NaN NaN 24.923 0.26467 24.923 24.773 25.038 0 0 0 0 0.022748 1 10631 56.729 32.575 1 NaN NaN 0 4253300 4253300 0 20240 830 7646 7822 31744 31744 LECVEPNCR 9 0 1 Unmodified _LECVEPNCR_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.7779 2 588.76044 1175.50633 NaN NaN NaN 0.324 0.00019076 NaN NaN NaN NaN 27.548 0.41699 27.548 27.34 27.757 0 0 0 0 0.038893 1 12907 50.607 33.831 1 NaN NaN 0 3023200 3023200 0 20241 830 7646 7822 31745 31745 LECVEPNCR 9 0 1 Unmodified _LECVEPNCR_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.7603 2 588.76044 1175.50633 73828.41 0.37351 0.00021991 -1.0553 -0.0006213 -0.68176 -0.00040139 588.761303055703 593.764458435518 30.103 2.5796 30.103 29.615 32.194 -1.9073E-06 921 164 15 0 0 0 0.000204 5 12281 106.36 64.704 1 1.175 1.0252 0 489620000 233890000 255720000 20242 830 7646 7822 31746;31747;31748;31749;31750 31746 LECVEPNCR 9 0 1 Unmodified _LECVEPNCR_ 0 0 0 B2R4V2;J3KQN4;Q969Q0;P83881;H0Y5B4;H7BZ11 B2R4V2 B2R4V2 RPL36A;RPL36AL;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.7606 2 588.76044 1175.50633 73603.45 0.2283 0.00013442 -0.84603 -0.00049811 -0.61773 -0.00036369 588.761463949717 593.764576722674 30.245 2.4969 30.245 29.757 32.254 1.9073E-06 818 142 13 0 0 0 2.2298E-05 4 11892 116.25 82.454 1 1.1217 0.9805 0 493450000 225000000 268440000 20243 830 7646 7822 31751;31752;31753;31754 31751 LEDCVLLATDVAAR 14 0 1 Unmodified _LEDCVLLATDVAAR_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03;A0A087WXU8;Q7Z4X3;Q7Z4W0;B4DGI6 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 778.4044 2 773.400698 1544.78684 NaN NaN NaN -0.30003 -0.00023205 NaN NaN NaN NaN 110.3 0.40877 110.3 110.08 110.49 7.6294E-06 0 0 0 0.001754 1 62751 68.44 55.864 1 NaN NaN 0 2134100 0 2134100 20244 993 7647 7823 31755 31755 LEDFFAR 7 0 1 Unmodified _LEDFFAR_ 0 0 0 Q2VF42;Q2Q9H2;Q2Q9B7;A8K8D9;P11413;Q0PHS1;E7EUI8;B4DYA7;E9PD92;E7EM57;Q0PHS5;A7IZZ3 Q2VF42 Q2VF42 G6PD Glucose-6-phosphate 1-dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.2309 2 449.226885 896.439217 100804 0.20912 9.3942E-05 0.14628 6.5711E-05 0.3554 0.00015965 449.226550581754 454.23083168934 73.115 0.19576 73.115 73.033 73.228 7.6294E-06 49 18 5 0 0 0 0.017423 1 42902 97.071 73.099 1 2.3232 2.4011 0 23627000 6129700 17497000 20245 775 7648 7824 31756 31756 LEDFFAR 7 0 1 Unmodified _LEDFFAR_ 0 0 0 Q2VF42;Q2Q9H2;Q2Q9B7;A8K8D9;P11413;Q0PHS1;E7EUI8;B4DYA7;E9PD92;E7EM57;Q0PHS5;A7IZZ3 Q2VF42 Q2VF42 G6PD Glucose-6-phosphate 1-dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.2309 2 449.226885 896.439217 104892.5 0.64207 0.00028844 -0.79167 -0.00035564 -0.1496 -6.7204E-05 449.226370053036 454.230512165177 71.73 0.17404 71.73 71.657 71.831 0 41 13 4 0 0 0 0.014426 2 43074 100.07 76.094 1 2.2445 2.2397 0 16703000 6131300 10571000 20246 775 7648 7824 31757;31758 31757 LEDLEVIQHR 10 0 1 Unmodified _LEDLEVIQHR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8409 2 626.338227 1250.6619 84110.59 0.60347 0.00037798 0.20765 0.00013006 0.81112 0.00050804 626.839689368553 631.342668024093 54.639 0.19159 54.639 54.573 54.765 -3.8147E-06 28 18 4 0 0 0 0.001108 1 30733 76.064 29.602 1 1.3706 1.3872 0 9740500 2835400 6905100 20247 415 7649 7825 31759 31759 LEDLEVIQHR 10 0 1 Unmodified _LEDLEVIQHR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.3447 2 626.338227 1250.6619 NaN NaN NaN 1.0193 0.0006384 NaN NaN NaN NaN 54.483 0.17965 54.483 54.394 54.573 3.8147E-06 0 0 0 0.0029859 1 30660 78.334 31.137 1 NaN NaN 0 4184400 0 4184400 20248 415 7649 7825 31760 31760 LEDLEVIQHR 10 0 1 Unmodified _LEDLEVIQHR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3429 2 626.338227 1250.6619 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.305 1 53.305 52.805 53.805 -3.8147E-06 0 0 0 6.1452E-05 1 30493 84.615 28.357 1 20249 415 7649 7825 31761 31761 LEDLEVIQHR 10 0 1 Unmodified _LEDLEVIQHR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3434 2 626.338227 1250.6619 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.488 1 53.488 52.988 53.988 -3.8147E-06 0 0 0 5.6389E-05 1 30582 85.731 31.314 1 20250 415 7649 7825 31762 31762 LEDLLQDAQDEK 12 1 0 Unmodified _LEDLLQDAQDEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.8474 2 708.846278 1415.678 75304.27 0.57495 0.00040755 0.82451 0.00058445 1.3995 0.000992 709.347540098144 712.854309860826 73.343 0.71494 73.343 72.961 73.676 0 183 66 5 0 0 0 2.5818E-05 2 42981 100.69 86.052 1 1.861 1.8229 0 22224000 8089800 14135000 20251 1754 7650 7826 31763;31764 31764 LEDLLQDAQDEK 12 1 0 Unmodified _LEDLLQDAQDEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.3489 2 708.846278 1415.678 74692.73 0.63693 0.00045149 0.46114 0.00032688 1.0981 0.00077836 708.846381971805 712.853926020756 72.25 0.69574 72.25 71.999 72.695 0 229 62 5 0 0 0 1.8475E-12 2 43297 125.74 112.62 1 1.6535 1.6934 0 25582000 8448800 17133000 20252 1754 7650 7826 31765;31766 31766 LEDLLQDAQDEK 12 1 0 Unmodified _LEDLLQDAQDEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.8531 2 708.846278 1415.678 NaN NaN NaN -0.25967 -0.00018406 NaN NaN NaN NaN 83.993 0.68454 83.993 83.765 84.449 0 0 0 0 0.0078387 1 44978 57.785 47.553 1 NaN NaN 0 2807500 0 2807500 20253 1754 7650 7826 31767 31767 LEDLLQDAQDEK 12 1 0 Unmodified _LEDLLQDAQDEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.8467 2 708.846278 1415.678 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.004 1 84.004 83.504 84.504 0 0 0 0 0.0088094 1 45042 58.37 41.738 1 20254 1754 7650 7826 31768 31768 LEDLLR 6 0 1 Unmodified _LEDLLR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;F1D8P6;B3KUU9;B6ZGS6;Q6I9R9;Q53FZ4;B2RDT1;B4DPR1;D3DV25;P51449 A0A024R1N4 A0A024R1N4 XRCC6;NR1F3;RORC X-ray repair cross-complementing protein 6;Nuclear receptor ROR-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.7239 2 379.723978 757.433404 95630.01 0.040387 1.5336E-05 -0.022348 -8.4862E-06 0.018039 6.8497E-06 379.723872764859 384.728021320156 56.044 1.5846 56.044 54.914 56.499 0 504 121 6 0 0 0 0.0065816 1 32158 138.38 0 1 0.37157 0.42468 0 153980000 111100000 42881000 20255 82 7651 7827 31769 31769 LEDLLR 6 0 1 Unmodified _LEDLLR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;F1D8P6;B3KUU9;B6ZGS6;Q6I9R9;Q53FZ4;B2RDT1;B4DPR1;D3DV25;P51449 A0A024R1N4 A0A024R1N4 XRCC6;NR1F3;RORC X-ray repair cross-complementing protein 6;Nuclear receptor ROR-gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 379.724 2 379.723978 757.433404 98577.5 0.23826 9.0475E-05 -0.16161 -6.1367E-05 0.076656 2.9108E-05 379.723820179303 384.727923601925 65.041 1.3927 65.041 64.28 65.673 0 352 101 5 0 0 0 0.050124 1 33670 74.717 0 1 0.26632 0.22893 0 6605900 4693000 1913000 20256 82 7651 7827 31770 31770 LEDLLRK 7 1 1 Unmodified _LEDLLRK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.7715 2 443.77146 885.528367 90198.78 0.19198 8.5196E-05 0.23829 0.00010575 0.43027 0.00019094 443.771478250598 452.782736370201 36.232 0.42933 36.232 36.024 36.453 0 160 39 5 0 0 0 0.0063137 1 18264 134.06 38.263 1 0.39643 0.477 0 91179000 65128000 26051000 20257 82 7652 7828 31771 31771 LEDLLRK 7 1 1 Unmodified _LEDLLRK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.7717 2 443.77146 885.528367 90847.49 0.21394 9.4941E-05 0.094843 4.2089E-05 0.30878 0.00013703 443.771413373465 452.782608144284 34.955 0.3503 34.955 34.733 35.083 0 128 29 6 0 0 0 0.01658 1 17687 113.1 38.911 1 0.39353 0.46323 0 83082000 60773000 22309000 20258 82 7652 7828 31772 31772 LEDLLRK 7 1 1 Unmodified _LEDLLRK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.7713 2 443.77146 885.528367 NaN NaN NaN 0.81287 0.00036073 NaN NaN NaN NaN 40.317 0.62229 40.317 40.03 40.652 3.8147E-06 0 0 0 0.037551 1 17975 64.803 16.63 1 NaN NaN 0 2158500 2158500 0 20259 82 7652 7828 31773 31773 LEDSSNQVTQAVAK 14 1 0 Unmodified _LEDSSNQVTQAVAK_ 0 0 0 P46939;A8K8Z1 P46939 P46939 UTRN Utrophin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.3868 2 745.378277 1488.742 NaN NaN NaN 0.11409 8.5043E-05 NaN NaN NaN NaN 39.793 0.16293 39.793 39.706 39.869 0 0 0 0 0.0045783 1 20675 58.172 30.159 1 NaN NaN 0 1872300 0 1872300 20260 1574 7653 7829 31774 31774 LEDSSNQVTQAVAK 14 1 0 Unmodified _LEDSSNQVTQAVAK_ 0 0 0 P46939;A8K8Z1 P46939 P46939 UTRN Utrophin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.3848 2 745.378277 1488.742 NaN NaN NaN -0.18603 -0.00013866 NaN NaN NaN NaN 38.858 0.16192 38.858 38.807 38.969 0 0 0 0 0.0049073 2 20484 57.019 45.306 1 NaN NaN 0 1732700 0 1732700 20261 1574 7653 7829 31775;31776 31775 LEDVALQILLACPVSK 16 1 0 Unmodified _LEDVALQILLACPVSK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 889.0043 2 884.997505 1767.98046 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.31 1 127.31 126.81 127.81 -7.6294E-06 0 0 0 5.1128E-05 1 82933 90.926 67.176 1 20262 1207 7654 7830 31777 31777 LEDVLPLAFTR 11 0 1 Unmodified _LEDVLPLAFTR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8628 2 637.36117 1272.70779 75423.71 1.0406 0.00066326 -0.22616 -0.00014415 0.81447 0.00051911 637.361061569759 642.365021463814 115.74 1.2308 115.74 115.33 116.56 0 479 80 11 0 0 0 4.3775E-05 2 73542 99.568 86.19 1 0.75964 0.89851 0 293760000 163200000 130560000 20263 1817 7655 7831 31778;31779 31779 LEDVLPLAFTR 11 0 1 Unmodified _LEDVLPLAFTR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.3618 2 637.36117 1272.70779 75628.07 0.66689 0.00042505 0.20944 0.00013349 0.87634 0.00055854 637.361325842997 642.36530431335 115.16 0.96245 115.16 114.76 115.72 7.6294E-06 358 61 11 0 0 0 2.7555E-05 1 74865 101.97 101.97 1 0.76151 0.88332 0 318750000 182470000 136280000 20264 1817 7655 7831 31780 31780 LEDVLPLAFTR 11 0 1 Unmodified _LEDVLPLAFTR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.3617 2 637.36117 1272.70779 75480.18 0.5661 0.00036081 0.59433 0.0003788 1.1604 0.00073962 637.361630445798 642.365622998487 127.21 1.7665 127.21 126.83 128.6 0 413 73 12 0 0 0 0.00043595 4 76478 78.655 78.655 1 0.88319 0.76383 0 117650000 62455000 55192000 20265 1817 7655 7831 31781;31782;31783;31784 31782 LEDVLPLAFTR 11 0 1 Unmodified _LEDVLPLAFTR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.3616 2 637.36117 1272.70779 75402.06 0.65313 0.00041628 0.50935 0.00032464 1.1625 0.00074092 637.361543293613 642.365585545634 127.01 1.8816 127.01 126.64 128.52 0 460 80 12 0 0 0 0.0025884 4 75414 61.353 61.353 1 0.86591 0.75602 0 123670000 65710000 57955000 20266 1817 7655 7831 31785;31786;31787;31788 31785 LEEDINSSMTNSTAASRPPVTLR 23 0 2 Oxidation (M) _LEEDINSSM(ox)TNSTAASRPPVTLR_ LEEDINSSM(1)TNSTAASRPPVTLR LEEDINSSM(66.87)TNSTAASRPPVTLR 0 1 1 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 842.4225 3 835.746503 2504.21768 67248.34 0.80003 0.00066862 -0.16953 -0.00014168 0.6305 0.00052694 836.080585335477 842.75275771527 63.864 0.79133 63.864 63.575 64.366 -3.8147E-06 402 71 7 0 0 0 3.2792E-09 2 36878 66.874 66.874 1 2.6745 2.9108 0 67109000 19183000 47926000 20267 1759 7656 7832 31789;31790 31790 1628 LEEDINSSMTNSTAASRPPVTLR 23 0 2 Unmodified _LEEDINSSMTNSTAASRPPVTLR_ 0 0 1 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.0887 3 830.414865 2488.22277 65996.13 0.6653 0.00055247 0.51127 0.00042457 1.1766 0.00097704 830.74926678464 837.087768511793 88.219 0.35675 88.219 88.049 88.406 7.6294E-06 79 21 5 0 0 0 0.0018081 1 48620 26.477 23.511 1 1.3901 1.2702 0 2023000 621560 1401500 20268 1759 7656 7833 31791 31791 LEEDINSSMTNSTAASRPPVTLR 23 0 2 Unmodified _LEEDINSSMTNSTAASRPPVTLR_ 0 0 1 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 837.4242 3 830.414865 2488.22277 67881.2 0.58994 0.00048989 0.72571 0.00060264 1.3156 0.0010925 830.749855364 837.422795106714 88.222 0.36746 88.222 87.989 88.357 0 61 19 5 0 0 0 0.0016488 1 47807 27.408 24.442 1 1.186 1.0567 0 1637900 654640 983260 20269 1759 7656 7833 31792 31792 LEEDISSSMTNSTAASRPPVTLR 23 0 2 Oxidation (M) _LEEDISSSM(ox)TNSTAASRPPVTLR_ LEEDISSSM(1)TNSTAASRPPVTLR LEEDISSSM(63.86)TNSTAASRPPVTLR 0 1 1 H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;H3BND9;Q15366;B4DLC0 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.0789 3 826.74287 2477.20678 65959.98 0.67517 0.00055819 -0.098717 -8.1614E-05 0.57645 0.00047658 827.07705328003 833.749369419202 65.459 0.93389 65.459 65.039 65.973 0 641 84 12 0 0 0 4.1905E-09 2 37575 63.857 63.857 1 3.0953 3.377 0 149070000 34293000 114780000 20270 1263;1760 7657 7834 31793;31794 31794 969 LEEDISSSMTNSTAASRPPVTLR 23 0 2 Oxidation (M) _LEEDISSSM(ox)TNSTAASRPPVTLR_ LEEDISSSM(1)TNSTAASRPPVTLR LEEDISSSM(79.47)TNSTAASRPPVTLR 0 1 1 H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;H3BND9;Q15366;B4DLC0 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.7494 3 826.74287 2477.20678 65739.37 0.65898 0.00054481 -0.20047 -0.00016573 0.45852 0.00037908 827.077045730745 833.415114577718 64.298 0.9562 64.298 63.883 64.839 0 658 88 12 0 0 0 5.5867E-10 2 37648 79.467 79.467 1 3.033 3.5641 0 133440000 30285000 103150000 20271 1263;1760 7657 7834 31795;31796 31795 969 LEEDKPAVER 10 1 1 Unmodified _LEEDKPAVER_ 0 0 1 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 395.8754 3 395.875182 1184.60372 94954.1 0.069365 2.746E-05 -0.0049198 -1.9476E-06 0.064445 2.5512E-05 395.875160383566 401.882730693449 19.802 0.38036 19.802 19.663 20.043 0 48 13 7 0 0 0 0.0080649 2 6273 47.844 36.311 1 0.77336 0.89647 0 29364000 16290000 13074000 20272 876 7658 7835 31797;31798 31797 LEEDKPAVER 10 1 1 Unmodified _LEEDKPAVER_ 0 0 1 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.3089 2 593.309135 1184.60372 NaN NaN NaN -0.19457 -0.00011544 NaN NaN NaN NaN 19.814 0.20237 19.814 19.692 19.894 0 0 0 0 1.7084E-14 1 6308 135.86 83.143 1 NaN NaN 0 19151000 19151000 0 20273 876 7658 7835 31799 31799 LEEDKPAVER 10 1 1 Unmodified _LEEDKPAVER_ 0 0 1 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3093 2 593.309135 1184.60372 80147.68 0.38156 0.00022638 0.076649 4.5477E-05 0.45821 0.00027186 593.308906173175 602.320398258221 19.595 0.32429 19.595 19.364 19.689 0 71 15 6 0 0 0 8.8047E-05 2 5911 101.64 48.477 1 0.85622 0.97397 0 18781000 11217000 7564800 20274 876 7658 7835 31800;31801 31801 LEEDKPAVER 10 1 1 Unmodified _LEEDKPAVER_ 0 0 1 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 395.875 3 395.875182 1184.60372 94295.65 -0.020132 -7.9699E-06 -0.076777 -3.0394E-05 -0.096909 -3.8364E-05 395.875036381127 401.88266773204 19.571 0.42092 19.571 19.364 19.785 0 91 19 7 0 0 0 0.0092127 1 5908 46.844 37.84 1 0.85174 0.97047 0 19690000 11308000 8381400 20275 876 7658 7835 31802 31802 LEEDKPAVER 10 1 1 Unmodified _LEEDKPAVER_ 0 0 1 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.3093 2 593.309135 1184.60372 78150.46 0.11166 6.6247E-05 0.38975 0.00023124 0.5014 0.00029749 593.309228485707 602.320708753979 21.2 0.2834 21.2 21.042 21.325 0 70 17 7 0 0 0 0.0094678 1 6305 83.948 38.866 1 1.3332 1.0931 0 4864800 2161000 2703800 20276 876 7658 7835 31803 31803 LEEDKPAVER 10 1 1 Unmodified _LEEDKPAVER_ 0 0 1 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.3217 2 593.309135 1184.60372 79454.42 0.13521 8.0219E-05 0.54247 0.00032186 0.67768 0.00040207 593.309004827315 602.320958115309 20.945 0.29323 20.945 20.814 21.108 1.9073E-06 62 14 6 0 0 0 0.0045775 2 5692 80.239 40.194 1 1.3455 1.1506 0 2802000 1252800 1549200 20277 876 7658 7835 31804;31805 31804 LEEGEVAMGR 10 0 1 Oxidation (M) _LEEGEVAM(ox)GR_ LEEGEVAM(1)GR LEEGEVAM(115.71)GR 0 1 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.7646 2 553.760963 1105.50737 79789.09 0.10336 5.7237E-05 -0.64799 -0.00035883 -0.54463 -0.0003016 553.761073317017 558.764685779002 23.237 0.4762 23.237 23.08 23.556 0 100 22 7 0 0 0 2.4512E-08 2 9198 115.71 78.156 1 1.8381 1.8737 0 30438000 9944600 20493000 20278 1741 7659 7836 31806;31807 31806 1583 LEEGEVAMGR 10 0 1 Oxidation (M) _LEEGEVAM(ox)GR_ LEEGEVAM(1)GR LEEGEVAM(107.57)GR 0 1 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.7649 2 553.760963 1105.50737 76546.58 0.25352 0.00014039 0.089931 4.98E-05 0.34346 0.00019019 553.761018528051 558.764883813722 23.028 0.53246 23.028 22.806 23.339 0 87 22 7 0 0 0 3.3309E-06 2 8883 107.57 70.016 1 1.5457 1.7431 0 46832000 17458000 29374000 20279 1741 7659 7836 31808;31809 31808 1583 LEEGEVAMGR 10 0 1 Oxidation (M) _LEEGEVAM(ox)GR_ LEEGEVAM(1)GR LEEGEVAM(70.26)GR 0 1 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.7644 2 553.760963 1105.50737 80393 0.23003 0.00012738 -0.01681 -9.3089E-06 0.21322 0.00011807 553.761093062883 558.765087940891 25.729 0.3413 25.729 25.578 25.919 0 56 13 6 0 0 0 0.0010572 1 9473 70.256 41.107 1 1.1208 0.93608 0 3245900 1585300 1660700 20280 1741 7659 7836 31810 31810 1583 LEEGEVAMGR 10 0 1 Oxidation (M) _LEEGEVAM(ox)GR_ LEEGEVAM(1)GR LEEGEVAM(68.02)GR 0 1 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.7649 2 553.760963 1105.50737 80198.59 0.5427 0.00030053 -0.13893 -7.6934E-05 0.40377 0.00022359 553.760866019763 558.765241966068 25.85 0.47147 25.85 25.532 26.003 1.9073E-06 60 18 6 0 0 0 0.0012949 2 9046 68.016 33.208 1 1.1061 0.98118 0 2392700 1071200 1321500 20281 1741 7659 7836 31811;31812 31812 1583 LEEGLVNNK 9 1 0 Unmodified _LEEGLVNNK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.2753 2 508.274564 1014.53457 85966.95 0.54641 0.00027773 -0.088476 -4.497E-05 0.45794 0.00023276 508.274340633425 512.281748642709 31.599 1.0365 31.599 30.94 31.976 1.9073E-06 339 97 5 0 0 0 8.2865E-05 2 15476 110.67 59.709 1 0.93294 0.95431 0 28367000 14101000 14266000 20282 486 7660 7837 31813;31814 31814 LEEGLVNNK 9 1 0 Unmodified _LEEGLVNNK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.282 2 508.274564 1014.53457 84347.77 0.31056 0.00015785 -0.067739 -3.443E-05 0.24282 0.00012342 508.274415060066 512.281583237575 31.141 0.9291 31.141 30.519 31.448 1.9073E-06 282 80 6 0 0 0 7.9139E-05 2 15199 110.81 59.842 1 0.93664 1.0569 0 64064000 33337000 30727000 20283 486 7660 7837 31815;31816 31816 LEEGLVNNK 9 1 0 Unmodified _LEEGLVNNK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.2817 2 508.274564 1014.53457 83997.58 0.46074 0.00023418 -0.25475 -0.00012948 0.20599 0.0001047 508.274353683482 512.281504326041 35.628 0.64083 35.628 35.354 35.995 0 260 53 8 0 0 0 0.00012949 2 15385 109.01 53.571 1 1.2475 1.0036 0 13842000 6354300 7487700 20284 486 7660 7837 31817;31818 31817 LEEGPPVTTVLTR 13 0 1 Unmodified _LEEGPPVTTVLTR_ 0 0 0 Q5JPU0;Q5JPT9;Q5JPU1;Q53GE3;A0A024RBX9;P08559;Q5JPU2 Q5JPU0 Q5JPU0 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha;Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3939 2 706.393199 1410.77184 72855.24 0.91751 0.00064812 0.86758 0.00061285 1.7851 0.001261 706.39453913819 711.397392240254 85.456 0.5934 85.456 85.197 85.79 0 144 48 4 0 0 0 0.00029664 1 51326 77.64 55.648 1 1.9799 2.0438 0 23999000 7066700 16932000 20285 349 7661 7838 31819 31819 LEEGPPVTTVLTR 13 0 1 Unmodified _LEEGPPVTTVLTR_ 0 0 0 Q5JPU0;Q5JPT9;Q5JPU1;Q53GE3;A0A024RBX9;P08559;Q5JPU2 Q5JPU0 Q5JPU0 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha;Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3976 2 706.393199 1410.77184 NaN NaN NaN 0.11782 8.323E-05 NaN NaN NaN NaN 84.595 0.48587 84.595 84.32 84.806 0 0 0 0 7.5145E-14 2 52013 121.08 75.079 1 NaN NaN 0 17518000 0 17518000 20286 349 7661 7838 31820;31821 31821 LEELDADK 8 1 0 Unmodified _LEELDADK_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63;C9JHK9;C9JZV3 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7332 2 466.732197 931.449842 NaN NaN NaN 1.1365 0.00053044 NaN NaN NaN NaN 28.44 0.18427 28.44 28.387 28.571 0 0 0 0 0.013844 1 13626 71.379 16.854 1 NaN NaN 0 11256000 11256000 0 20287 455 7662 7839 31822 31822 LEELHVIDVK 10 1 0 Unmodified _LEELHVIDVK_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 398.8963 3 398.895806 1193.66559 95479.21 0.039814 1.5882E-05 0.08772 3.4991E-05 0.12753 5.0873E-05 398.895765928621 401.567194362002 71.02 0.9781 71.02 70.564 71.542 7.6294E-06 453 80 9 0 0 0 0.021036 1 41194 33.89 16.523 1 0.73258 0.8241 0 71773000 43894000 27879000 20288 1770 7663 7840 31823 31823 LEELHVIDVK 10 1 0 Unmodified _LEELHVIDVK_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.84 2 597.840071 1193.66559 77978.84 0.66943 0.00040021 0.058361 3.4891E-05 0.72779 0.0004351 597.840095805169 601.847125559875 71.064 0.81416 71.064 70.554 71.368 0 315 66 7 0 0 0 2.1783E-11 2 41384 129.85 91.765 1 0.71211 0.79133 0 60077000 34354000 25723000 20289 1770 7663 7840 31824;31825 31825 LEELHVIDVK 10 1 0 Unmodified _LEELHVIDVK_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.847 2 597.840071 1193.66559 NaN NaN NaN -0.53886 -0.00032215 NaN NaN NaN NaN 69.129 1.1261 69.129 68.568 69.694 0 0 0 0 8.3464E-08 1 40780 111.61 76.065 1 NaN NaN 0 27577000 0 27577000 20290 1770 7663 7840 31826 31826 LEELHVIDVK 10 1 0 Unmodified _LEELHVIDVK_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.8403 2 597.840071 1193.66559 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.93 1 68.93 68.43 69.43 0 0 0 0 9.337E-18 1 40988 142.43 95.433 1 20291 1770 7663 7840 31827 31827 LEELHVIDVK 10 1 0 Unmodified _LEELHVIDVK_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.8474 2 597.840071 1193.66559 79048.14 0.38359 0.00022932 0.95802 0.00057274 1.3416 0.00080207 598.342260324967 601.847317245288 80.075 0.81695 80.075 79.836 80.653 0 208 55 9 0 0 0 2.6231E-05 1 43169 103.26 82.385 1 2.2391 1.8131 0 23734000 7594400 16140000 20292 1770 7663 7840 31828 31828 LEELHVIDVK 10 1 0 Unmodified _LEELHVIDVK_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.8472 2 597.840071 1193.66559 79117.33 0.52069 0.00031129 0.4026 0.00024069 0.92328 0.00055198 598.341756207651 601.847115363775 80.142 0.65311 80.142 79.931 80.584 7.6294E-06 199 38 9 0 0 0 1.2858E-05 1 42342 107.21 86.335 1 2.1849 1.7536 0 18249000 5929900 12319000 20293 1770 7663 7840 31829 31829 LEELSLEGNPFLTVNDNLK 19 1 0 Unmodified _LEELSLEGNPFLTVNDNLK_ 0 0 0 A0A140VJD0;Q9UFC0;H7C5S6;Q59FT0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1077.5684 2 1073.05733 2144.10011 58712.34 0.46359 0.00049746 1.3318 0.0014291 1.7954 0.0019265 1073.55993134368 1077.56820775711 122.14 0.33611 122.14 121.99 122.33 -7.6294E-06 114 24 6 0 0 0 1.0499E-05 3 80950 72.891 57.729 1 1.1475 1.1857 0 9709100 4724000 4985100 20294 599 7664 7841 31830;31831;31832 31830 LEELTMDGAK 10 1 0 Oxidation (M) _LEELTM(ox)DGAK_ LEELTM(1)DGAK LEELTM(95.5)DGAK 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2;H0YDU4 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.7714 2 561.770997 1121.52744 78052.44 0.53827 0.00030238 -0.9856 -0.00055368 -0.44733 -0.0002513 561.769929152979 565.77780498325 30.707 1.1642 30.707 30.2 31.364 0 408 94 8 0 0 0 7.5666E-05 2 15029 95.502 57.943 1 0.88361 0.99821 0 140570000 79855000 60715000 20295 785 7665 7842 31833;31834 31834 620 LEELTMDGAK 10 1 0 Oxidation (M) _LEELTM(ox)DGAK_ LEELTM(1)DGAK LEELTM(85.73)DGAK 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2;H0YDU4 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.7709 2 561.770997 1121.52744 79665.83 0.39684 0.00022293 -0.69915 -0.00039276 -0.30231 -0.00016983 561.770120535668 565.77807686543 30.122 1.2259 30.122 29.581 30.807 0 418 99 8 0 0 0 0.00024629 2 14691 85.731 41.284 1 0.83674 0.95411 0 151950000 82724000 69224000 20296 785 7665 7842 31835;31836 31836 620 LEELTMDGAK 10 1 0 Oxidation (M) _LEELTM(ox)DGAK_ LEELTM(1)DGAK LEELTM(47.19)DGAK 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2;H0YDU4 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.7783 2 561.770997 1121.52744 NaN NaN NaN -0.24461 -0.00013741 NaN NaN NaN NaN 34.846 0.92546 34.846 34.522 35.447 0 0 0 0 0.015081 1 15398 47.187 9.6285 1 NaN NaN 0 4200000 0 4200000 20297 785 7665 7842 31837 31837 620 LEELTMDGAK 10 1 0 Oxidation (M) _LEELTM(ox)DGAK_ LEELTM(1)DGAK LEELTM(50.47)DGAK 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2;H0YDU4 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.7785 2 561.770997 1121.52744 NaN NaN NaN -0.23778 -0.00013358 NaN NaN NaN NaN 35 0.76835 35 34.631 35.399 0 0 0 0 0.011168 1 14959 50.473 16.676 1 NaN NaN 0 4568200 0 4568200 20298 785 7665 7842 31838 31838 620 LEELTMDGAK 10 1 0 Unmodified _LEELTMDGAK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2;H0YDU4 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.781 2 553.773539 1105.53253 82258.23 0.30372 0.00016819 -0.18971 -0.00010506 0.11401 6.3135E-05 553.773598544573 557.780392923022 60.329 0.81545 60.329 60.057 60.873 -3.8147E-06 254 68 6 0 0 0 0.00061895 2 30817 83.948 39.501 1 1.1255 0.89231 0 6391300 2882100 3509200 20299 785 7665 7843 31839;31840 31839 LEELTMDGAK 10 1 0 Unmodified _LEELTMDGAK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2;H0YDU4 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.7807 2 553.773539 1105.53253 81722.44 0.45285 0.00025078 -0.26463 -0.00014654 0.18822 0.00010423 553.773619707291 557.78040084422 60.943 0.71657 60.943 60.534 61.251 0 246 62 6 0 0 0 0.0098227 1 30371 54.191 20.394 1 1.1261 0.92271 0 5381300 2586000 2795200 20300 785 7665 7843 31841 31841 LEEMFPDEVDTPR 13 0 1 Oxidation (M) _LEEM(ox)FPDEVDTPR_ LEEM(1)FPDEVDTPR LEEM(68.07)FPDEVDTPR 0 1 0 Q2NL82 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.8657 2 797.358696 1592.70284 69727.59 0.84494 0.00067372 -0.07769 -6.1947E-05 0.76725 0.00061177 797.358590581476 802.362513939201 75.047 0.43375 75.047 74.796 75.23 0 114 34 4 0 0 0 0.00012114 2 44129 68.069 58.115 1 0.80231 0.8394 0 12889000 8087900 4801000 20301 1776 7666 7844 31842;31843 31842 1647 LEEMFPDEVDTPR 13 0 1 Oxidation (M) _LEEM(ox)FPDEVDTPR_ LEEM(1)FPDEVDTPR LEEM(94.47)FPDEVDTPR 0 1 0 Q2NL82 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.3636 2 797.358696 1592.70284 68333.83 0.7374 0.00058797 -0.18743 -0.00014945 0.54996 0.00043852 797.358445542047 802.362617551685 74.09 0.44135 74.09 73.828 74.269 0 119 36 5 0 0 0 3.7449E-05 1 44514 94.465 78.088 1 0.81378 0.80399 0 15043000 6849000 8194100 20302 1776 7666 7844 31844 31844 1647 LEEMFPDEVDTPR 13 0 1 Oxidation (M) _LEEM(ox)FPDEVDTPR_ LEEM(1)FPDEVDTPR LEEM(54.34)FPDEVDTPR 0 1 0 Q2NL82 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 797.8845 2 797.358696 1592.70284 70952.32 0.57349 0.00045728 0.19529 0.00015571 0.76878 0.00061299 797.358844428693 802.362421800542 85.772 0.47777 85.772 85.543 86.021 0 71 27 4 0 0 0 0.025467 1 46950 54.343 48.618 1 0.43438 0.38442 0 1502200 1034600 467550 20303 1776 7666 7844 31845 31845 1647 LEEMFPDEVDTPR 13 0 1 Oxidation (M) _LEEM(ox)FPDEVDTPR_ LEEM(1)FPDEVDTPR LEEM(46.73)FPDEVDTPR 0 1 0 Q2NL82 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 797.3581 2 797.358696 1592.70284 69697.09 0.62957 0.00050199 0.079821 6.3646E-05 0.70939 0.00056564 797.358549980029 802.363553665102 85.949 0.41483 85.949 85.792 86.207 0 80 22 5 0 0 0 0.00289 1 46358 46.73 40.626 1 0.35754 0.31093 0 1553000 1056700 496310 20304 1776 7666 7844 31846 31846 1647 LEENIDNIK 9 1 0 Unmodified _LEENIDNIK_ 0 0 0 Q92878 Q92878 Q92878 RAD50 DNA repair protein RAD50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.2849 2 544.285128 1086.5557 83929.25 0.44535 0.0002424 -0.12805 -6.9695E-05 0.3173 0.0001727 544.284912236067 548.292323950619 46.105 0.4417 46.105 45.902 46.344 3.8147E-06 118 34 5 0 0 0 9.1292E-08 2 25415 140.5 47.239 1 0.69229 0.70661 0 31313000 17007000 14306000 20305 1953 7667 7845 31847;31848 31847 LEEQLENLIEFIR 13 0 1 Unmodified _LEEQLENLIEFIR_ 0 0 0 Q6FGV9;Q15126 Q6FGV9 Q6FGV9 PMVK Phosphomevalonate kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.4487 2 823.44342 1644.87229 NaN NaN NaN 0.31741 0.00026137 NaN NaN NaN NaN 131.09 0.46283 131.09 130.84 131.3 0 0 0 0 1.179E-29 1 87658 153.95 130.1 1 NaN NaN 0 5917100 0 5917100 20306 1753 7668 7846 31849 31849 LEEQLENLIEFIR 13 0 1 Unmodified _LEEQLENLIEFIR_ 0 0 0 Q6FGV9;Q15126 Q6FGV9 Q6FGV9 PMVK Phosphomevalonate kinase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.4449 2 823.44342 1644.87229 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.03 1 131.03 130.53 131.53 0 0 0 0 0.00044291 1 87651 85.813 39.84 1 20307 1753 7668 7846 31850 31850 LEEQLGR 7 0 1 Unmodified _LEEQLGR_ 0 0 0 Q9NSK3;A0A024R5K1;Q9BR76;Q2NNQ8;A9Z1Z3 Q9NSK3 Q9NSK3 DKFZp762I166;CORO1B;FER1L4 Coronin;Coronin-1B;Fer-1-like protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.734 2 422.729792 843.445031 93680.21 -0.085999 -3.6354E-05 0.15067 6.3691E-05 0.064667 2.7337E-05 422.729465964278 427.733792233443 25.672 0.41032 25.672 25.513 25.923 0 75 22 4 0 0 0 0.0099453 1 11261 114.54 22.955 1 1.6024 1.6155 0 9467200 3912900 5554300 20308 184 7669 7847 31851 31851 LEEQLGR 7 0 1 Unmodified _LEEQLGR_ 0 0 0 Q9NSK3;A0A024R5K1;Q9BR76;Q2NNQ8;A9Z1Z3 Q9NSK3 Q9NSK3 DKFZp762I166;CORO1B;FER1L4 Coronin;Coronin-1B;Fer-1-like protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.7336 2 422.729792 843.445031 99593.26 0.26354 0.00011141 0.15714 6.6429E-05 0.42068 0.00017784 422.729841271946 427.733760345786 30.167 0.26981 30.167 29.981 30.251 0 45 23 4 0 0 0 0.026743 1 14710 77.748 4.7096 1 1.079 1.1036 0 19005000 8958900 10046000 20309 184 7669 7847 31852 31852 LEEQLQDLDVALK 13 1 0 Unmodified _LEEQLQDLDVALK_ 0 0 0 Q96T23;H0YCN2;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.4163 2 757.409046 1512.80354 71117.13 0.73316 0.00055531 0.0054768 4.1482E-06 0.73864 0.00055945 757.409203106412 761.415894741281 101.57 0.6343 101.57 101.24 101.88 0 259 50 8 0 0 0 3.0932E-19 1 63972 147.91 147.91 1 0.47436 0.54205 0 157300000 106260000 51033000 20310 1991 7670 7848 31853 31853 LEEQLQDLDVALK 13 1 0 Unmodified _LEEQLQDLDVALK_ 0 0 0 Q96T23;H0YCN2;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 761.4166 2 757.409046 1512.80354 71046.55 0.96519 0.00073104 0.73365 0.00055567 1.6988 0.0012867 757.409624859792 761.416636300478 114.43 0.62978 114.43 114.25 114.88 7.6294E-06 127 27 8 0 0 0 6.235E-06 2 66824 104.82 104.82 1 0.89176 0.69083 0 13024000 6997300 6026700 20311 1991 7670 7848 31854;31855 31855 LEEQLQDLDVALK 13 1 0 Unmodified _LEEQLQDLDVALK_ 0 0 0 Q96T23;H0YCN2;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.9128 2 757.409046 1512.80354 70697.27 0.73233 0.00055467 0.57159 0.00043292 1.3039 0.00098759 757.409452821802 761.416544965368 114.45 0.51978 114.45 114.17 114.69 0 98 21 6 0 0 0 2.3253E-13 3 65829 128.01 112.48 1 0.91152 0.74674 0 12499000 6769400 5729700 20312 1991 7670 7848 31856;31857;31858 31857 LEEQMEPR 8 0 1 Oxidation (M) _LEEQM(ox)EPR_ LEEQM(1)EPR LEEQM(60.79)EPR 0 1 0 REV__F5H3Y4 REV__F5H3Y4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 524.244 2 524.242406 1046.47026 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.41 1 101.41 100.91 101.91 7.6294E-06 0 0 0 0.015776 1 56609 60.788 29.498 1 + 20313 2175 7671 7849 31859 31859 2013 LEESSTIGQDQTLMER 16 0 1 Oxidation (M) _LEESSTIGQDQTLM(ox)ER_ LEESSTIGQDQTLM(1)ER LEESSTIGQDQTLM(104.17)ER 0 1 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9;D6RBF8 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 926.9329 2 926.933287 1851.85202 64117.07 0.52134 0.00048325 0.074308 6.8879E-05 0.59565 0.00055212 926.933464361372 931.937582417423 50.834 0.45359 50.834 50.657 51.11 0 115 40 6 0 0 0 7.2526E-09 2 28125 104.17 97.988 1 2.8279 2.871 0 29057000 8150100 20907000 20314 1988 7672 7850 31860;31861 31861 1819 LEESSTIGQDQTLMER 16 0 1 Oxidation (M) _LEESSTIGQDQTLM(ox)ER_ LEESSTIGQDQTLM(1)ER LEESSTIGQDQTLM(105.65)ER 0 1 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9;D6RBF8 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.9324 2 926.933287 1851.85202 63615.49 0.83647 0.00077535 -0.23786 -0.00022048 0.59861 0.00055487 926.932932173381 931.937142805466 49.719 0.45324 49.719 49.498 49.951 0 162 36 7 0 0 0 5.9938E-09 3 28076 105.65 105.65 1 2.2381 2.3624 0 23430000 6430500 17000000 20315 1988 7672 7850 31862;31863;31864 31864 1819 LEFETYLR 8 0 1 Unmodified _LEFETYLR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.7833 2 535.779482 1069.54441 84230.09 0.55548 0.00029761 0.34789 0.00018639 0.90337 0.00048401 535.779441454064 540.78352939307 103.81 0.5715 103.81 103.56 104.13 -7.6294E-06 162 36 7 0 0 0 0.006912 2 59033 85.212 85.212 1 1.0597 0.91226 0 7415700 3706600 3709100 20316 118 7673 7851 31865;31866 31865 LEFETYLR 8 0 1 Unmodified _LEFETYLR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.7839 2 535.779482 1069.54441 83908.62 0.33635 0.00018021 0.96984 0.00051962 1.3062 0.00069983 535.779619735823 540.783797833005 103.65 0.49583 103.65 103.45 103.94 7.6294E-06 165 32 7 0 0 0 0.012282 2 58098 67.981 67.981 1 0.92734 0.77164 0 7277800 3921600 3356200 20317 118 7673 7851 31867;31868 31867 LEFIQPNVISGIPIYR 16 0 1 Unmodified _LEFIQPNVISGIPIYR_ 0 0 0 F5GXU9;Q658P7;Q59EI3;B2R8A9;A0A024R0K3;Q6ZSA3;F5H5P2;P12694 F5GXU9 F5GXU9 BCKDHA;DKFZp313C0640 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 935.5328 2 930.024911 1858.03527 NaN NaN NaN 0.6163 0.00057317 NaN NaN NaN NaN 126.45 0.26707 126.45 126.3 126.57 -7.6294E-06 0 0 0 0.0063673 1 82294 52.247 41.921 1 NaN NaN 0 2280800 0 2280800 20318 50 7674 7852 31869 31869 LEFSDETFGSNIPK 14 1 0 Unmodified _LEFSDETFGSNIPK_ 0 0 0 C9IZ01;E5KND7;E5KND5;Q96RP9 C9IZ01 C9IZ01 GFM1 Elongation factor G, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.3919 2 792.383028 1582.7515 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.506 1 94.506 94.006 95.006 7.6294E-06 0 0 0 0.0021626 1 57404 65.842 47.978 1 20319 1126 7675 7853 31870 31870 LEFSDETFGSNIPK 14 1 0 Unmodified _LEFSDETFGSNIPK_ 0 0 0 C9IZ01;E5KND7;E5KND5;Q96RP9 C9IZ01 C9IZ01 GFM1 Elongation factor G, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.3911 2 792.383028 1582.7515 NaN NaN NaN 0.47601 0.00037718 NaN NaN NaN NaN 93.799 0.44497 93.799 93.547 93.992 0 0 0 0 0.0017985 2 58187 68.069 41.95 1 NaN NaN 0 9584400 0 9584400 20320 1126 7675 7853 31871;31872 31872 LEGALGADTTEDGDEK 16 1 0 Unmodified _LEGALGADTTEDGDEK_ 0 0 0 Q9NZM1;H0YD14 Q9NZM1 Q9NZM1 MYOF Myoferlin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.8658 2 810.865396 1619.71624 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.858 1 40.858 40.358 41.358 0 0 0 0 0.031604 1 21426 41.401 28.445 1 20321 2088 7676 7854 31873 31873 LEGALGADTTEDGDEK 16 1 0 Unmodified _LEGALGADTTEDGDEK_ 0 0 0 Q9NZM1;H0YD14 Q9NZM1 Q9NZM1 MYOF Myoferlin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.8652 2 810.865396 1619.71624 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.059 1 40.059 39.559 40.559 0 0 0 0 0.00029949 1 21328 80.522 63.086 1 20322 2088 7676 7854 31874 31874 LEGLGSSEADQDGLASTVR 19 0 1 Unmodified _LEGLGSSEADQDGLASTVR_ 0 0 0 B3KVX6;Q8TB01;Q6NWZ1;A0A024RBH2;Q07065 B3KVX6 B3KVX6 CKAP4 Cytoskeleton-associated protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 958.4697 2 952.963433 1903.91231 NaN NaN NaN -0.91782 -0.00087465 NaN NaN NaN NaN 77.813 0.33999 77.813 77.622 77.962 0 0 0 0 1.6061E-13 2 45991 103.76 87.229 1 NaN NaN 0 3039000 0 3039000 20323 338 7677 7855 31875;31876 31876 LEGLGSSEADQDGLASTVR 19 0 1 Unmodified _LEGLGSSEADQDGLASTVR_ 0 0 0 B3KVX6;Q8TB01;Q6NWZ1;A0A024RBH2;Q07065 B3KVX6 B3KVX6 CKAP4 Cytoskeleton-associated protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 952.9639 2 952.963433 1903.91231 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.999 1 76.999 76.499 77.499 0 0 0 0 1.1256E-05 1 46527 74.678 59.139 1 20324 338 7677 7855 31877 31877 LEGLTDEINFLR 12 0 1 Unmodified _LEGLTDEINFLR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931;F8W1U3;F8VP67 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3777 2 710.377549 1418.74054 71781 0.73072 0.00051909 0.073202 5.2001E-05 0.80393 0.00057109 710.377763108106 715.381639944625 115.4 1.1817 115.4 114.98 116.16 7.6294E-06 592 75 11 0 0 0 7.6124E-13 4 73821 132.91 94.62 1 1.0676 1.2659 0 585330000 293090000 292240000 + 20325 1156 7678 7856 31878;31879;31880;31881 31881 LEGLTDEINFLR 12 0 1 Unmodified _LEGLTDEINFLR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931;F8W1U3;F8VP67 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.378 2 710.377549 1418.74054 72406.83 0.81039 0.00057568 0.019879 1.4121E-05 0.83026 0.0005898 710.377735714369 715.38161066179 114.79 1.3585 114.79 114.47 115.83 -7.6294E-06 532 87 12 0 0 0 5.6831E-60 2 74613 205.59 175.33 1 1.0499 1.2345 0 950010000 458130000 491870000 + 20326 1156 7678 7856 31882;31883 31883 LEGLTDEINFLR 12 0 1 Unmodified _LEGLTDEINFLR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931;F8W1U3;F8VP67 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.3821 2 710.377549 1418.74054 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.4 1 115.4 114.9 115.9 7.6294E-06 0 0 0 8.0284E-07 1 75284 102.06 39.239 1 + 20327 1156 7678 7856 31884 31884 LEGLTDEINFLR 12 0 1 Unmodified _LEGLTDEINFLR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931;F8W1U3;F8VP67 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.3776 2 710.377549 1418.74054 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.4 1 115.4 114.9 115.9 0 0 0 0 3.7515E-16 1 75285 123.63 79.316 1 + 20328 1156 7678 7856 31885 31885 LEGLTDEINFLR 12 0 1 Unmodified _LEGLTDEINFLR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931;F8W1U3;F8VP67 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.4085 2 710.377549 1418.74054 72714.6 1.0073 0.00071554 -0.42697 -0.00030331 0.58029 0.00041223 710.376551596398 715.380951378028 115.86 0.53736 115.86 115.67 116.2 0 89 35 6 0 0 0 0.012644 1 75708 60.518 42.207 1 1.2579 1.2705 0 5581600 2737100 2844600 + 20329 1156 7678 7856 31886 31886 LEGLTDEINFLR 12 0 1 Unmodified _LEGLTDEINFLR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931;F8W1U3;F8VP67 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.3831 2 710.377549 1418.74054 71640.81 0.8245 0.00058571 0.14357 0.00010199 0.96807 0.00068769 710.377735104057 715.381769931923 126.76 1.7648 126.76 126.45 128.21 0 435 70 12 0 0 0 2.6684E-29 3 76237 167.93 111.74 1 1.7698 1.5317 0 132050000 44722000 87330000 + 20330 1156 7678 7856 31887;31888;31889 31888 LEGLTDEINFLR 12 0 1 Unmodified _LEGLTDEINFLR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931;F8W1U3;F8VP67 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 715.3828 2 710.377549 1418.74054 71781.12 0.63972 0.00045444 0.1368 9.7178E-05 0.77651 0.00055162 710.377746729206 715.381724545573 126.64 1.3776 126.64 126.3 127.68 7.6294E-06 388 59 11 0 0 0 1.5589E-08 2 75172 121.83 53.021 1 1.7603 1.537 0 132660000 49074000 83589000 + 20331 1156 7678 7856 31890;31891 31890 LEGTEDLSDVLVR 13 0 1 Unmodified _LEGTEDLSDVLVR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.3795 2 723.377746 1444.74094 70398.63 0.74928 0.00054202 0.37533 0.00027151 1.1246 0.00081352 723.377842716341 728.38188737923 97.466 1.311 97.466 96.891 98.202 0 814 112 12 0 0 0 3.0932E-19 4 59495 147.91 92.359 1 0.71252 0.84443 0 503580000 315510000 188060000 20332 740 7679 7857 31892;31893;31894;31895 31893 LEGTEDLSDVLVR 13 0 1 Unmodified _LEGTEDLSDVLVR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.3777 2 723.377746 1444.74094 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.344 1 98.344 97.844 98.844 7.6294E-06 0 0 0 0.017104 1 60105 49.5 25.157 1 20333 740 7679 7857 31896 31896 LEGTEDLSDVLVR 13 0 1 Unmodified _LEGTEDLSDVLVR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.3763 2 723.377746 1444.74094 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.517 1 98.517 98.017 99.017 0 0 0 0 0.004185 1 60227 61.353 35.968 1 20334 740 7679 7857 31897 31897 LEGTEDLSDVLVR 13 0 1 Unmodified _LEGTEDLSDVLVR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.3823 2 723.377746 1444.74094 71189.85 0.88995 0.00064377 0.10037 7.2606E-05 0.99032 0.00071638 723.377646125927 728.381742460631 96.7 1.4724 96.7 96.101 97.573 0 732 123 9 0 0 0 2.824E-40 5 60259 188.28 141.08 1 0.72949 0.85224 0 567620000 327330000 240290000 20335 740 7679 7857 31898;31899;31900;31901;31902 31899 LEGTEDLSDVLVR 13 0 1 Unmodified _LEGTEDLSDVLVR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.3823 2 723.377746 1444.74094 71011.81 0.86374 0.00062481 0.0096759 6.9993E-06 0.87342 0.00063181 723.377780376095 728.38179744554 110.28 1.936 110.28 109.6 111.54 0 556 94 13 0 0 0 1.1843E-09 5 63532 124.1 85.8 1 1.4562 1.2618 0 159760000 65029000 94734000 20336 740 7679 7857 31903;31904;31905;31906;31907 31903 LEGTEDLSDVLVR 13 0 1 Unmodified _LEGTEDLSDVLVR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.3819 2 723.377746 1444.74094 70708.56 0.83019 0.00060054 -0.033167 -2.3992E-05 0.79702 0.00057655 723.377705474197 728.381786940388 110.21 1.7063 110.21 109.82 111.53 -7.6294E-06 551 88 11 0 0 0 1.8934E-23 3 62558 152.7 106.7 1 1.485 1.2963 0 99356000 40343000 59013000 20337 740 7679 7857 31908;31909;31910 31908 LEGVLAEVAQHYQDTLIR 18 0 1 Unmodified _LEGVLAEVAQHYQDTLIR_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;Q6P1N4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.3712 3 685.700494 2054.07965 74829.9 0.63429 0.00043493 -0.12251 -8.4003E-05 0.51178 0.00035093 686.035220243956 689.370836797099 115.24 0.62936 115.24 114.9 115.53 0 186 40 8 0 0 0 1.3203E-12 2 73238 109.42 109.42 1 1.7681 1.8576 0 11642000 4987600 6654700 20338 352 7680 7858 31911;31912 31911 LEGVLAEVAQHYQDTLIR 18 0 1 Unmodified _LEGVLAEVAQHYQDTLIR_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;Q6P1N4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.0368 3 685.700494 2054.07965 74473.96 0.6923 0.00047471 0.075493 5.1766E-05 0.76779 0.00052647 686.368761839728 689.37098859226 114.52 0.51576 114.52 114.29 114.8 -7.6294E-06 159 32 7 0 0 0 3.8556E-06 1 74480 78.078 78.078 1 1.8407 1.8277 0 16099000 6648800 9449700 20339 352 7680 7858 31913 31913 LEHDVNIQFPDK 12 1 0 Unmodified _LEHDVNIQFPDK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;Q96CF6;Q2HJC8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2517 3 485.580658 1453.72014 88947.63 0.39472 0.00019167 -0.084828 -4.1191E-05 0.30989 0.00015048 485.580649815469 488.251832571663 65.622 0.57358 65.622 65.37 65.943 0 201 51 6 0 0 0 0.0061329 1 37796 39.73 39.73 1 1.8077 1.9222 0 15868000 6751200 9116700 20340 154 7681 7859 31914 31914 LEHVVEEEK 9 1 0 Unmodified _LEHVVEEEK_ 0 0 0 Q6LES9;A8K3S0;Q59GW7;P40937;A8K4Z2 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.2923 2 556.285128 1110.5557 81626.52 0.3054 0.00016989 0.13598 7.5643E-05 0.44138 0.00024553 556.284992177932 560.292247500723 19.952 0.34842 19.952 19.828 20.176 0 20 9 5 0 0 0 5.6591E-12 2 6443 158.76 128.5 1 1.0636 1.0488 0 24775000 11182000 13593000 20341 726 7682 7860 31915;31916 31915 LEHVVEEEK 9 1 0 Unmodified _LEHVVEEEK_ 0 0 0 Q6LES9;A8K3S0;Q59GW7;P40937;A8K4Z2 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.2853 2 556.285128 1110.5557 81053.39 0.012737 7.0854E-06 -0.4773 -0.00026552 -0.46457 -0.00025843 556.284966139726 560.291828013324 19.665 0.42843 19.665 19.484 19.913 0 68 19 6 0 0 0 5.5253E-25 3 6032 181.41 181.41 1 1.143 1.155 0 28644000 13162000 15482000 20342 726 7682 7860 31917;31918;31919 31918 LEHVVEEEK 9 1 0 Unmodified _LEHVVEEEK_ 0 0 0 Q6LES9;A8K3S0;Q59GW7;P40937;A8K4Z2 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.8638 3 371.192511 1110.5557 100443 -0.41431 -0.00015379 -0.094731 -3.5163E-05 -0.50905 -0.00018895 371.192408121382 373.863823294813 19.669 0.32996 19.669 19.484 19.814 0 50 15 5 0 0 0 0.0059725 1 6034 52.49 47.026 1 1.1552 1.1531 0 14575000 6742600 7832800 20343 726 7682 7860 31920 31920 LEIDLLK 7 1 0 Unmodified _LEIDLLK_ 0 0 0 P49454;Q9UHT7;A0A087WTY4;G0ZI12;E9PDD2;Q53FL7;P19320 P49454 P49454 CENPF;VCAM1 Centromere protein F;Vascular cell adhesion protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.27 2 422.262936 842.51132 93151.26 0.68235 0.00028813 -0.25609 -0.00010814 0.42626 0.00018 422.262872036349 426.26974909922 96.08 0.79456 96.08 95.62 96.414 0 173 70 4 0 0 0 0.028306 1 58418 72.138 25.475 1 1.26 1.2403 0 19783000 8234200 11549000 20344 1581 7683 7861 31921 31921 LEIENLNLAQK 11 1 0 Unmodified _LEIENLNLAQK_ 0 0 0 A0A087X0P0;Q02224 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.8618 2 642.861534 1283.70852 77340.99 0.69105 0.00044425 0.34866 0.00022414 1.0397 0.00066838 642.862577439919 646.868441741085 98.683 0.44843 98.683 98.487 98.936 0 95 28 4 0 0 0 0.031594 1 55657 38.086 19.775 1 1.4623 1.2224 0 1663400 694150 969210 20345 445 7684 7862 31922 31922 LEILQIHTK 9 1 0 Unmodified _LEILQIHTK_ 0 0 0 V9HW80;P55072;Q96IF9;Q0IIN5;Q9NTC4;Q9HAP0 V9HW80 V9HW80 HEL-S-70;VCP;DKFZp434K0126 Transitional endoplasmic reticulum ATPase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 368.2281 3 365.557125 1093.64954 99913.52 -0.0084332 -3.0828E-06 -0.4907 -0.00017938 -0.49913 -0.00018246 365.556875648526 368.22829155177 64.901 0.22327 64.901 64.812 65.035 0 58 17 6 0 0 0 0.0086312 1 38261 46.819 42.965 1 1.2261 1.2738 0 11177000 5706800 5470100 20346 1613 7685 7863 31923 31923 LEILQQQLQVANEAR 15 0 1 Unmodified _LEILQQQLQVANEAR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.9832 2 876.983775 1751.953 64977.03 0.67402 0.0005911 0.090095 7.9012E-05 0.76411 0.00067012 876.983827460622 881.988148039921 95.354 0.64749 95.354 95.016 95.663 0 253 48 7 0 0 0 2.0197E-07 2 57842 108.56 108.56 1 0.86986 0.88765 0 30799000 17390000 13409000 20347 186;1747;718 7686 7864 31924;31925 31925 LEILQQQLQVANEAR 15 0 1 Unmodified _LEILQQQLQVANEAR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.9888 2 876.983775 1751.953 64984.7 0.65373 0.00057331 -0.014684 -1.2878E-05 0.63905 0.00056044 876.983844618418 881.988150293391 94.615 0.72707 94.615 94.283 95.01 0 307 60 7 0 0 0 6.074E-22 5 58649 142.91 142.91 1 0.83877 0.91682 0 39414000 20751000 18663000 20348 186;1747;718 7686 7864 31926;31927;31928;31929;31930 31926 LEILQQQLQVANEAR 15 0 1 Unmodified _LEILQQQLQVANEAR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 876.9842 2 876.983775 1751.953 65182.38 0.68918 0.0006044 0.0070614 6.1927E-06 0.69624 0.00061059 877.484995336241 881.987863375008 108.67 0.709 108.67 108.42 109.13 0 202 34 11 0 0 0 4.6328E-10 3 62394 113.24 113.24 1 1.4132 1.2097 0 40152000 16236000 23917000 20349 186;1747;718 7686 7864 31931;31932;31933 31932 LEILQQQLQVANEAR 15 0 1 Unmodified _LEILQQQLQVANEAR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 876.9849 2 876.983775 1751.953 64922.65 0.30193 0.00026479 -0.23609 -0.00020705 0.065836 5.7737E-05 877.483107138695 881.988004497712 108.6 1.092 108.6 107.8 108.89 0 215 54 9 0 0 0 5.936E-07 2 61434 100.55 100.55 1 1.4 1.2212 0 28636000 11515000 17121000 20350 186;1747;718 7686 7864 31934;31935 31935 LEINCQDPSIK 11 1 0 Unmodified _LEINCQDPSIK_ 0 0 0 A0A0S2Z696;B3KM38;A0A0S2Z5C2;A0A0S2Z5G4;B4DE54;A0A0S2Z5M2;Q8N9N5;C9JYB6;C9JGM9;C9JF73;C9JTM8;E9PJI6;C9J811;D3DUN6 A0A0S2Z696 A0A0S2Z696 BANP Protein BANP MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.8286 2 658.829377 1315.6442 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.998 1 55.998 55.498 56.498 3.8147E-06 0 0 0 0.039138 1 31521 44.863 22.123 1 20351 579 7687 7865 31936 31936 LEINFEELLK 10 1 0 Unmodified _LEINFEELLK_ 0 0 0 E7ETM8;B4DDI0;E7EUA0;B4DUN9;H7BXY5;D3DQ79;Q0ZGT2 E7ETM8 E7ETM8 NEXN Nexilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.3563 2 624.347729 1246.6809 79275.52 0.80836 0.0005047 0.39043 0.00024376 1.1988 0.00074846 624.347349908924 628.35508931086 123.79 0.37555 123.79 123.65 124.02 0 63 26 5 0 0 0 0.0020391 1 80355 70.908 70.908 1 2.404 2.6769 0 2536300 1041100 1495200 20352 959 7688 7866 31937 31937 LEINFEELLK 10 1 0 Unmodified _LEINFEELLK_ 0 0 0 E7ETM8;B4DDI0;E7EUA0;B4DUN9;H7BXY5;D3DQ79;Q0ZGT2 E7ETM8 E7ETM8 NEXN Nexilin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3566 2 624.347729 1246.6809 NaN NaN NaN 0.0069017 4.3091E-06 NaN NaN NaN NaN 123.3 0.40308 123.3 123.14 123.54 -7.6294E-06 0 0 0 0.0047029 1 81860 71.614 56.463 1 NaN NaN 0 3378500 0 3378500 20353 959 7688 7866 31938 31938 LEIYVVTAEGLRPVK 15 1 1 Unmodified _LEIYVVTAEGLRPVK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5GZY8;F5GYG8;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.9984 3 562.997812 1685.97161 80245.28 0.54972 0.00030949 0.035012 1.9711E-05 0.58473 0.0003292 563.33210012006 569.005351779118 102.58 1.2359 102.58 101.98 103.21 7.6294E-06 529 103 8 0 0 0 0.00079922 1 62955 46.926 46.926 1 0.69808 0.82519 0 38264000 23865000 14399000 20354 1770 7689 7867 31939 31939 LEIYVVTAEGLRPVK 15 1 1 Unmodified _LEIYVVTAEGLRPVK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5GZY8;F5GYG8;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.9942 2 843.99308 1685.97161 67185.67 0.56013 0.00047274 0.53737 0.00045353 1.0975 0.00092627 843.993341681005 853.004558695912 102.74 0.68054 102.74 102.17 102.85 0 172 57 4 0 0 0 0.0031147 2 63026 59.57 59.57 1 0.75382 0.85341 0 23474000 14544000 8929200 20355 1770 7689 7867 31940;31941 31940 LEIYVVTAEGLRPVK 15 1 1 Unmodified _LEIYVVTAEGLRPVK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5GZY8;F5GYG8;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.3395 3 562.997812 1685.97161 79871.6 0.73745 0.00041518 -0.21512 -0.00012111 0.52233 0.00029407 562.997594996366 569.005166490349 101.57 1.0899 101.57 100.85 101.94 0 453 85 8 0 0 0 0.0020637 2 63540 39.143 39.143 1 0.71126 0.84154 0 188090000 114770000 73316000 20356 1770 7689 7867 31942;31943 31942 LEIYVVTAEGLRPVK 15 1 1 Unmodified _LEIYVVTAEGLRPVK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5GZY8;F5GYG8;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.4963 2 843.99308 1685.97161 67414.82 0.81535 0.00068815 0.030035 2.5349E-05 0.84538 0.0007135 843.993294206233 853.505421128215 101.55 0.69312 101.55 100.96 101.65 0 225 54 6 0 0 0 0.0018109 1 63651 69.864 69.864 1 0.73576 0.8716 0 228830000 135050000 93774000 20357 1770 7689 7867 31944 31944 LEIYVVTAEGLRPVK 15 1 1 Unmodified _LEIYVVTAEGLRPVK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5GZY8;F5GYG8;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 853.0065 2 843.99308 1685.97161 66936.96 1.1044 0.0009321 -0.067139 -5.6665E-05 1.0373 0.00087544 844.494514531935 853.004271939337 113.69 0.48428 113.69 113.43 113.91 0 126 22 7 0 0 0 8.6055E-05 2 66148 87.001 87.001 1 1.3072 1.114 0 9498100 4448500 5049700 20358 1770 7689 7867 31945;31946 31945 LEIYVVTAEGLRPVK 15 1 1 Unmodified _LEIYVVTAEGLRPVK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5GZY8;F5GYG8;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.0054 3 562.997812 1685.97161 79391.41 1.0574 0.00059533 -0.23966 -0.00013493 0.81776 0.0004604 562.997609146847 569.005165429126 113.69 0.68888 113.69 113.41 114.1 0 195 31 10 0 0 0 0.00025223 2 66188 55.173 55.173 1 1.2059 1.0499 0 20427000 10370000 10057000 20359 1770 7689 7867 31947;31948 31948 LEIYVVTAEGLRPVK 15 1 1 Unmodified _LEIYVVTAEGLRPVK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5GZY8;F5GYG8;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.3398 3 562.997812 1685.97161 79839.07 0.63181 0.00035571 -0.019972 -1.1244E-05 0.61184 0.00034447 562.997677539555 569.005240461226 113.41 0.72601 113.41 113.18 113.91 0 170 35 8 0 0 0 0.0011242 2 65075 44.925 44.925 1 1.3494 1.146 0 24573000 11711000 12862000 20360 1770 7689 7867 31949;31950 31950 LEIYVVTAEGLRPVK 15 1 1 Unmodified _LEIYVVTAEGLRPVK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;F5GZY8;F5GYG8;F5H198 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 844.4952 2 843.99308 1685.97161 66769.94 0.69873 0.00058972 0.16442 0.00013877 0.86315 0.00072849 844.494593607454 853.004431594171 113.43 0.50701 113.43 113.18 113.69 0 142 24 8 0 0 0 4.3416E-05 2 65091 103.88 103.88 1 1.1649 0.98974 0 26833000 12024000 14808000 20361 1770 7689 7867 31951;31952 31952 LELDALR 7 0 1 Unmodified _LELDALR_ 0 0 0 A0A024R804;A8WFP5;O60675;A0A024R8X1;O15525;Q9ULX9;B0QY70;B0QY71 A0A024R804;A0A024R8X1;Q9ULX9 A0A024R804 MAFK;hCG_1991559;MAFG;MAFF Transcription factor MafK;Transcription factor MafG;Transcription factor MafF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.2423 2 415.242535 828.470518 92556.38 -0.15842 -6.5783E-05 0.06864 2.8502E-05 -0.089781 -3.7281E-05 415.242550099681 420.246643635266 72.446 0.79028 72.446 72.006 72.796 0 266 57 6 0 0 0 0.031311 2 42189 67.344 10.009 1 1.3455 1.5313 0 114400000 49249000 65152000 20362 239;262;2112 7690 7868 31953;31954 31953 LELDALR 7 0 1 Unmodified _LELDALR_ 0 0 0 A0A024R804;A8WFP5;O60675;A0A024R8X1;O15525;Q9ULX9;B0QY70;B0QY71 A0A024R804;A0A024R8X1;Q9ULX9 A0A024R804 MAFK;hCG_1991559;MAFG;MAFF Transcription factor MafK;Transcription factor MafG;Transcription factor MafF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.2426 2 415.242535 828.470518 92531.38 0.05748 2.3868E-05 -0.23975 -9.9556E-05 -0.18227 -7.5687E-05 415.242439644071 420.246531182328 71.152 0.71291 71.152 70.787 71.5 0 244 52 8 0 0 0 0.014014 2 42471 101.21 17.924 1 1.3498 1.5505 0 193320000 81302000 112020000 20363 239;262;2112 7690 7868 31955;31956 31956 LELEQTYQAK 10 1 0 Unmodified _LELEQTYQAK_ 0 0 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.8288 2 611.819335 1221.62412 77912.93 0.54953 0.00033621 0.62246 0.00038083 1.172 0.00071705 611.819549523279 615.826304273217 49.547 0.56363 49.547 49.283 49.847 0 104 35 4 0 0 0 1.438E-40 2 27152 197.3 163.5 1 0.81096 0.91085 0 68717000 34916000 33801000 20364 1682 7691 7869 31957;31958 31957 LELEQTYQAK 10 1 0 Unmodified _LELEQTYQAK_ 0 0 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.8257 2 611.819335 1221.62412 NaN NaN NaN 0.30348 0.00018567 NaN NaN NaN NaN 48.148 0.60782 48.148 48.005 48.613 0 0 0 0 1.77E-40 1 26837 180.45 149.88 1 NaN NaN 0 39933000 0 39933000 20365 1682 7691 7869 31959 31959 LELEQTYQAK 10 1 0 Unmodified _LELEQTYQAK_ 0 0 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.8267 2 611.819335 1221.62412 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.13 1 57.13 56.63 57.63 0 0 0 0 0.0014294 1 28912 68.846 34.925 1 20366 1682 7691 7869 31960 31960 LELFPVELEK 10 1 0 Unmodified _LELFPVELEK_ 0 0 0 D3DTX6;Q96SB3;B7ZLX4;D6W5R0;A4D1I0;Q9ULJ8 D3DTX6 D3DTX6 PPP1R9B;PPP1R9A;hCG_1741805 Neurabin-2;Neurabin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8522 2 608.844822 1215.67509 80463.47 0.47205 0.00028741 -1.9073 -0.0011612 -1.4352 -0.00087383 609.345818552359 612.852075431637 115.21 0.49561 115.21 114.96 115.46 0 89 31 5 0 0 0 0.013042 1 73174 49.813 28.307 1 1.8181 1.8254 0 5136200 1545200 3591000 20367 1190 7692 7870 31961 31961 LELFPVELEK 10 1 0 Unmodified _LELFPVELEK_ 0 0 0 D3DTX6;Q96SB3;B7ZLX4;D6W5R0;A4D1I0;Q9ULJ8 D3DTX6 D3DTX6 PPP1R9B;PPP1R9A;hCG_1741805 Neurabin-2;Neurabin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.8453 2 608.844822 1215.67509 88240.58 0.61554 0.00037477 0.010781 6.5638E-06 0.62632 0.00038133 608.843948069867 612.852041185257 126.75 0.46645 126.75 126.47 126.94 7.6294E-06 54 17 5 0 0 0 0.041207 2 76315 38.293 38.293 1 4.0111 3.3837 0 1946000 599890 1346200 20368 1190 7692 7870 31962;31963 31963 LELFPVELEK 10 1 0 Unmodified _LELFPVELEK_ 0 0 0 D3DTX6;Q96SB3;B7ZLX4;D6W5R0;A4D1I0;Q9ULJ8 D3DTX6 D3DTX6 PPP1R9B;PPP1R9A;hCG_1741805 Neurabin-2;Neurabin-1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.8521 2 608.844822 1215.67509 NaN NaN NaN 0.17341 0.00010558 NaN NaN NaN NaN 126.5 0.46392 126.5 126.32 126.79 0 0 0 0 0.052973 1 75164 45.997 15.426 1 NaN NaN 0 1026800 0 1026800 20369 1190 7692 7870 31964 31964 LELLAAYEEVIR 12 0 1 Unmodified _LELLAAYEEVIR_ 0 0 0 Q16643;D6R9W4;D6RFI1 Q16643 Q16643 DBN1 Drebrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.898 2 709.898117 1417.78168 78484.82 0.82625 0.00058655 0.089317 6.3406E-05 0.91557 0.00064996 709.897966142693 714.902367266173 120.37 0.43295 120.37 120.14 120.57 0 105 29 5 0 0 0 0.00019951 2 77602 81.865 66.605 1 1.2313 1.2825 0 5208600 1907800 3300900 20370 1773 7693 7871 31965;31966 31966 LELLAAYEEVIR 12 0 1 Unmodified _LELLAAYEEVIR_ 0 0 0 Q16643;D6R9W4;D6RFI1 Q16643 Q16643 DBN1 Drebrin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.3774 2 709.898117 1417.78168 76821.15 0.95904 0.00068082 0.15267 0.00010838 1.1117 0.0007892 709.898315268857 714.902321103784 119.78 0.38622 119.78 119.61 120 7.6294E-06 121 27 7 0 0 0 0.0054948 1 78961 75.294 75.294 1 1.2357 1.2459 0 6324800 3092000 3232700 20371 1773 7693 7871 31967 31967 LELLLQK 7 1 0 Unmodified _LELLLQK_ 0 0 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;Q6AI02;Q4LE48;Q8WVM7;Q68DW7;B1AMT4 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2;DKFZp686P168;STAG1 variant protein;STAG1;DKFZp781D1416 Cohesin subunit SA-2;Cohesin subunit SA-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 428.7791 2 428.778754 855.542954 94383.31 0.068762 2.9484E-05 0.33309 0.00014282 0.40185 0.00017231 428.778771562748 432.786005443364 79.891 0.62249 79.891 79.597 80.22 7.6294E-06 155 53 4 0 0 0 0.032276 1 47513 65.803 0 1 0.81125 0.80978 0 9714700 4677200 5037500 20372 863 7694 7872 31968 31968 LELQGPR 7 0 1 Unmodified _LELQGPR_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.7388 2 406.734877 811.455202 91546.73 0.25925 0.00010545 -0.064367 -2.618E-05 0.19488 7.9265E-05 406.734732709222 411.738858840828 37.206 1.5462 37.206 36.549 38.096 3.8147E-06 451 135 8 0 0 0 0.025781 2 18758 88.734 34.327 1 1.1553 1.3672 0 335940000 165340000 170590000 20373 151 7695 7873 31969;31970 31969 LELQGPR 7 0 1 Unmodified _LELQGPR_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 406.7345 2 406.734877 811.455202 92168.22 0.32065 0.00013042 -0.25384 -0.00010325 0.066809 2.7174E-05 406.734803954481 411.738837955103 36.382 1.4181 36.382 35.914 37.332 0 503 115 8 0 0 0 0.013268 2 18573 103.28 38.508 1 1.1743 1.3632 0 339710000 170520000 169190000 20374 151 7695 7873 31971;31972 31972 LELQGPR 7 0 1 Unmodified _LELQGPR_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 411.7389 2 406.734877 811.455202 93242.94 -0.11707 -4.7616E-05 0.17702 7.2001E-05 0.059952 2.4385E-05 406.734845311684 411.739002113329 41.893 0.72987 41.893 41.605 42.335 0 250 56 6 0 0 0 0.026743 2 19494 77.748 37.645 1 0.5862 0.47789 0 15255000 9558500 5696800 20375 151 7695 7873 31973;31974 31974 LELQGPR 7 0 1 Unmodified _LELQGPR_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 411.7391 2 406.734877 811.455202 94827.4 -0.45781 -0.00018621 0.41522 0.00016888 -0.042593 -1.7324E-05 406.734939779408 411.739103116791 42.017 0.72676 42.017 41.592 42.319 0 261 57 6 0 0 0 0.044796 1 18907 57.463 26.795 1 0.59526 0.48416 0 12384000 8058900 4325500 20376 151 7695 7873 31975 31975 LELQNVPR 8 0 1 Unmodified _LELQNVPR_ 0 0 0 F2Z2W7;Q8IZ69;B4E213;C9K041 F2Z2W7 F2Z2W7 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.7841 2 484.779816 967.545079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.268 1 53.268 52.768 53.768 0 0 0 0 0.045764 1 29769 56.011 20.131 1 20377 1254 7696 7874 31976 31976 LELSVHLQPITR 12 0 1 Unmodified _LELSVHLQPITR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.2762 3 469.276909 1404.8089 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.619 1 89.619 89.119 90.119 0 0 0 0 0.0013334 1 54095 66.498 36.562 1 20378 1411 7697 7875 31977 31977 LELSVHLQPITR 12 0 1 Unmodified _LELSVHLQPITR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.2761 3 469.276909 1404.8089 92929.48 0.04757 2.2324E-05 -0.34414 -0.0001615 -0.29657 -0.00013918 469.276570688361 472.612775241456 88.427 0.32237 88.427 88.229 88.552 0 59 28 4 0 0 0 6.2674E-05 1 54499 79.492 65.483 1 1.0089 1.1708 0 58667000 28400000 30267000 20379 1411 7697 7875 31978 31978 LEMEGITVK 9 1 0 Oxidation (M) _LEM(ox)EGITVK_ LEM(1)EGITVK LEM(52.26)EGITVK 0 1 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.2804 2 518.273175 1034.5318 81430.59 0.77183 0.00040002 0.8191 0.00042452 1.5909 0.00082453 518.273536726069 522.280072749467 39.749 0.37106 39.749 39.576 39.947 0 78 31 4 0 0 0 0.0088308 1 21139 52.255 24.037 1 2.0537 2.0736 0 16314000 6550500 9763200 20380 511 7698 7876 31979 31979 357 LEMLEK 6 1 0 Oxidation (M) _LEM(ox)LEK_ LEM(1)LEK LEM(77.75)LEK 0 1 0 B3KUP5;B7Z455;B4DV26;A0A024R1Y5;Q5IBP5;A0A087WX84;A4D1E4;Q96KG3;A0A0A0MRE9;A0A0A0MRF6;Q96C10;Q99996 REV__Q9UEL2 REV__Q9UEL2 LGP2;AKAP9;DHX58 Probable ATP-dependent RNA helicase DHX58;A-kinase anchor protein 9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.7115 2 389.704397 777.394241 NaN NaN NaN 0.20493 7.9862E-05 NaN NaN NaN NaN 27.128 0.3295 27.128 26.926 27.256 0 0 0 0 0.021761 1 12343 77.748 15.034 1 NaN NaN 0 20472000 0 20472000 20381 96 7699 7877 31980 31980 86 LEMLEK 6 1 0 Oxidation (M) _LEM(ox)LEK_ LEM(1)LEK LEM(91.58)LEK 0 1 0 B3KUP5;B7Z455;B4DV26;A0A024R1Y5;Q5IBP5;A0A087WX84;A4D1E4;Q96KG3;A0A0A0MRE9;A0A0A0MRF6;Q96C10;Q99996 REV__Q9UEL2 REV__Q9UEL2 LGP2;AKAP9;DHX58 Probable ATP-dependent RNA helicase DHX58;A-kinase anchor protein 9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 389.7042 2 389.704397 777.394241 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.079 1 27.079 26.579 27.579 0 0 0 0 0.0199 1 12355 91.584 16.274 1 20382 96 7699 7877 31981 31981 86 LEMLEK 6 1 0 Oxidation (M) _LEM(ox)LEK_ LEM(1)LEK LEM(82.26)LEK 0 1 0 B3KUP5;B7Z455;B4DV26;A0A024R1Y5;Q5IBP5;A0A087WX84;A4D1E4;Q96KG3;A0A0A0MRE9;A0A0A0MRF6;Q96C10;Q99996 REV__Q9UEL2 REV__Q9UEL2 LGP2;AKAP9;DHX58 Probable ATP-dependent RNA helicase DHX58;A-kinase anchor protein 9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.7117 2 389.704397 777.394241 NaN NaN NaN -0.24695 -9.6238E-05 NaN NaN NaN NaN 26.734 0.29464 26.734 26.588 26.883 0 0 0 0 0.024655 1 12126 82.263 15.228 1 NaN NaN 0 11661000 0 11661000 20383 96 7699 7877 31982 31982 86 LENDQIESLR 10 0 1 Unmodified _LENDQIESLR_ 0 0 0 A8K492;P56192;B4DF61;H0YIP0;H0YI94;H0YHL6;H0YI27 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.8163 2 608.812042 1215.60953 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.046 1 50.046 49.546 50.546 3.8147E-06 0 0 0 9.337E-18 1 28236 142.43 63.931 1 20384 732 7700 7878 31983 31983 LENDQIESLR 10 0 1 Unmodified _LENDQIESLR_ 0 0 0 A8K492;P56192;B4DF61;H0YIP0;H0YI94;H0YHL6;H0YI27 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.8171 2 608.812042 1215.60953 76342.41 0.27838 0.00016948 0.90589 0.00055152 1.1843 0.000721 608.813204984016 613.81644348245 59.254 0.48317 59.254 59.044 59.527 0 140 37 5 0 0 0 0.0013651 2 30155 73.985 37.139 1 1.2942 1.082 0 3561900 1452300 2109600 20385 732 7700 7878 31984;31985 31984 LENDQIESLR 10 0 1 Unmodified _LENDQIESLR_ 0 0 0 A8K492;P56192;B4DF61;H0YIP0;H0YI94;H0YHL6;H0YI27 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.8171 2 608.812042 1215.60953 NaN NaN NaN 0.46185 0.00028118 NaN NaN NaN NaN 59.749 0.51213 59.749 59.569 60.081 0 0 0 0 0.018231 1 29833 55.084 24.397 1 NaN NaN 0 1301300 0 1301300 20386 732 7700 7878 31986 31986 LENDQIESLR 10 0 1 Unmodified _LENDQIESLR_ 0 0 0 A8K492;P56192;B4DF61;H0YIP0;H0YI94;H0YHL6;H0YI27 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.8137 2 608.812042 1215.60953 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.823 1 59.823 59.323 60.323 -3.8147E-06 0 0 0 0.023936 1 29884 52.579 32.792 1 20387 732 7700 7878 31987 31987 LENEIQTYR 9 0 1 Unmodified _LENEIQTYR_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.2966 2 583.296027 1164.5775 NaN NaN NaN -0.10435 -6.0865E-05 NaN NaN NaN NaN 39.958 0.78164 39.958 39.637 40.418 -3.8147E-06 0 0 0 3.0037E-05 1 20666 107.57 78.425 1 NaN NaN 0 275590000 275590000 0 + 20388 1161 7701 7879 31988 31988 LENEIQTYR 9 0 1 Unmodified _LENEIQTYR_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.2969 2 583.296027 1164.5775 NaN NaN NaN 8.849E-05 5.1616E-08 NaN NaN NaN NaN 38.866 0.81422 38.866 38.663 39.477 0 0 0 0 1.743E-06 1 20376 117.81 86.281 1 NaN NaN 0 319640000 319640000 0 + 20389 1161 7701 7879 31989 31989 LENEIQTYR 9 0 1 Unmodified _LENEIQTYR_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.2962 2 583.296027 1164.5775 NaN NaN NaN -1.3177 -0.00076863 NaN NaN NaN NaN 46.09 1.4019 46.09 45.761 47.163 0 0 0 0 5.5383E-09 2 21499 130.75 77.193 1 NaN NaN 0 26649000 26649000 0 + 20390 1161 7701 7879 31990;31991 31990 LENVLFGPHDCSHAPPDGYPIIPTSGSVPVQK 32 1 0 Unmodified _LENVLFGPHDCSHAPPDGYPIIPTSGSVPVQK_ 0 0 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.4332 4 857.929045 3427.68708 NaN NaN NaN -0.21569 -0.00018505 NaN NaN NaN NaN 115.83 0.48959 115.83 115.58 116.07 0 0 0 0 0.023157 1 67879 22.008 20.079 1 NaN NaN 0 5778100 0 5778100 20391 1676 7702 7880 31992 31992 LENVLFGPHDCSHAPPDGYPIIPTSGSVPVQK 32 1 0 Unmodified _LENVLFGPHDCSHAPPDGYPIIPTSGSVPVQK_ 0 0 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 860.4321 4 857.929045 3427.68708 NaN NaN NaN -0.52832 -0.00045326 NaN NaN NaN NaN 115.6 0.45339 115.6 115.37 115.82 0 0 0 0 0.00013241 1 66820 38.857 36.975 1 NaN NaN 0 4225500 0 4225500 20392 1676 7702 7880 31993 31993 LENYFEELLK 10 1 0 Unmodified _LENYFEELLK_ 0 0 0 A0A024R784;O15164;B4DYZ9 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.3381 2 649.337361 1296.66017 76852.18 0.93615 0.00060788 0.38503 0.00025001 1.3212 0.00085789 649.337398654868 653.344882088197 117.98 0.67986 117.98 117.69 118.37 0 128 39 5 0 0 0 1.0181E-08 2 75640 123.86 100.43 1 1.3062 1.3304 0 10375000 4472400 5902800 20393 217 7703 7881 31994;31995 31994 LENYFEELLK 10 1 0 Unmodified _LENYFEELLK_ 0 0 0 A0A024R784;O15164;B4DYZ9 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.3368 2 649.337361 1296.66017 76882.91 0.75303 0.00048897 0.13333 8.6573E-05 0.88635 0.00057554 649.337353764724 653.34446942809 117.44 0.56822 117.44 117.18 117.74 0 124 33 5 0 0 0 1.4432E-06 2 76980 111.65 98.274 1 1.317 1.3146 0 14981000 6950900 8030200 20394 217 7703 7881 31996;31997 31996 LENYFEELLK 10 1 0 Unmodified _LENYFEELLK_ 0 0 0 A0A024R784;O15164;B4DYZ9 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.3381 2 649.337361 1296.66017 76090.01 0.79747 0.00051783 -0.039376 -2.5568E-05 0.7581 0.00049226 649.337357930537 653.344381622547 129.97 0.53212 129.97 129.72 130.25 0 96 24 6 0 0 0 0.0052581 2 78735 60.398 54.093 1 1.6583 1.3775 0 2278000 908310 1369700 20395 217 7703 7881 31998;31999 31998 LENYFEELLK 10 1 0 Unmodified _LENYFEELLK_ 0 0 0 A0A024R784;O15164;B4DYZ9 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.3387 2 649.337361 1296.66017 76420.56 1.0311 0.00066951 0.28141 0.00018273 1.3125 0.00085224 649.337539226039 653.344497975688 129.81 0.49387 129.81 129.55 130.05 0 68 16 6 0 0 0 0.011074 1 77643 52.49 46.185 1 1.4723 1.1793 0 2445000 1042300 1402700 20396 217 7703 7881 32000 32000 LEPANEEHNVETAEDSEIR 19 0 1 Unmodified _LEPANEEHNVETAEDSEIR_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.6716 3 728.001338 2180.98218 70913.49 0.79963 0.00058213 -0.23816 -0.00017338 0.56146 0.00040875 728.335553364678 731.337641117899 48.572 0.52502 48.572 48.322 48.847 0 229 38 9 0 0 0 4.7156E-23 2 26410 115.98 98.154 1 1.0199 1.093 0 45964000 23856000 22108000 20397 247 7704 7882 32001;32002 32001 LEPANEEHNVETAEDSEIR 19 0 1 Unmodified _LEPANEEHNVETAEDSEIR_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.002 3 728.001338 2180.98218 70302.38 0.7154 0.00052081 -0.36666 -0.00026693 0.34874 0.00025388 728.335616070145 731.67136304982 47.224 0.56835 47.224 47.011 47.58 0 227 41 8 0 0 0 5.751E-06 1 26138 62.966 48.656 1 1.0824 1.2332 0 49581000 19507000 30074000 20398 247 7704 7882 32003 32003 LEPANEEHNVETAEDSEIR 19 0 1 Unmodified _LEPANEEHNVETAEDSEIR_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 731.6733 3 728.001338 2180.98218 70743.28 0.7297 0.00053122 0.88711 0.00064581 1.6168 0.001177 728.335768395678 731.338138971182 57.505 0.73623 57.505 57.173 57.909 3.8147E-06 210 54 7 0 0 0 0.0010417 2 29077 21.1 13.297 1 1.5028 1.2923 0 6809400 3020200 3789200 20399 247 7704 7882 32004;32005 32005 LEPHEGLLLR 10 0 1 Unmodified _LEPHEGLLLR_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;F5GZI0 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 396.2319 3 392.896029 1175.66626 97040.71 0.33696 0.00013239 -0.4006 -0.00015739 -0.063639 -2.5003E-05 392.895796932277 396.231914141171 57.521 0.3223 57.521 57.353 57.676 0 94 26 5 0 0 0 0.027744 2 33285 31.11 24.552 1 1.2414 1.2437 0 11336000 5767900 5568200 20400 1072 7705 7883 32006;32007 32007 LEPIETNQNAVFQYISR 17 0 1 Unmodified _LEPIETNQNAVFQYISR_ 0 0 0 Q2TB10;B7Z4V7;A0A087WXB4;C9JHX9;Q49A13;Q4G0T8 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1016.5256 2 1011.51818 2021.0218 60720.68 0.9245 0.00093515 -0.17212 -0.0001741 0.75239 0.00076105 1011.5188609023 1016.52142142063 110.51 0.40927 110.51 110.33 110.74 -7.6294E-06 159 30 8 0 0 0 8.8307E-07 2 69340 92.039 92.039 1 1.0795 1.1188 0 22890000 9695300 13195000 20401 1777 7706 7884 32008;32009 32008 LEPIETNQNAVFQYISR 17 0 1 Unmodified _LEPIETNQNAVFQYISR_ 0 0 0 Q2TB10;B7Z4V7;A0A087WXB4;C9JHX9;Q49A13;Q4G0T8 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1017.0228 2 1011.51818 2021.0218 NaN NaN NaN -0.68502 -0.00069291 NaN NaN NaN NaN 109.94 0.38529 109.94 109.78 110.16 0 0 0 0 2.627E-07 1 70613 90.759 68.886 1 NaN NaN 0 13781000 0 13781000 20402 1777 7706 7884 32010 32010 LEPIETNQNAVFQYISR 17 0 1 Unmodified _LEPIETNQNAVFQYISR_ 0 0 0 Q2TB10;B7Z4V7;A0A087WXB4;C9JHX9;Q49A13;Q4G0T8 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1012.0223 2 1011.51818 2021.0218 NaN NaN NaN 1.9801 0.0020029 NaN NaN NaN NaN 109.94 0.35277 109.94 109.79 110.15 7.6294E-06 0 0 0 1.0688E-09 2 70698 103.85 82.996 1 NaN NaN 0 15496000 15496000 0 20403 1777 7706 7884 32011;32012 32011 LEPIETNQNAVFQYISR 17 0 1 Unmodified _LEPIETNQNAVFQYISR_ 0 0 0 Q2TB10;B7Z4V7;A0A087WXB4;C9JHX9;Q49A13;Q4G0T8 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1017.0252 2 1011.51818 2021.0218 60137.03 0.53793 0.00054413 -0.10222 -0.00010339 0.43572 0.00044074 1012.01942531385 1016.5224830836 121.75 0.64317 121.75 121.56 122.21 0 161 32 9 0 0 0 4.4497E-05 3 72448 78.814 78.814 1 1.5786 1.2871 0 15076000 6204700 8871500 20404 1777 7706 7884 32013;32014;32015 32013 LEPIETNQNAVFQYISR 17 0 1 Unmodified _LEPIETNQNAVFQYISR_ 0 0 0 Q2TB10;B7Z4V7;A0A087WXB4;C9JHX9;Q49A13;Q4G0T8 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1011.5179 2 1011.51818 2021.0218 60484.49 0.49092 0.00049658 -0.050649 -5.1232E-05 0.44027 0.00044534 1012.01967485969 1016.52238997235 121.56 0.58007 121.56 121.39 121.97 7.6294E-06 172 28 10 0 0 0 0.0001189 2 71414 58.079 58.079 1 1.5284 1.2555 0 13846000 5636500 8209600 20405 1777 7706 7884 32016;32017 32017 LEPLYSPIR 9 0 1 Unmodified _LEPLYSPIR_ 0 0 0 Q8N523;A0A024R1I7;Q9UBB9;B4DPE5;B4DSX8 Q8N523 Q8N523 TFIP11 Tuftelin-interacting protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.3104 2 544.310949 1086.60735 84729.48 0.66395 0.00036139 -0.3175 -0.00017282 0.34645 0.00018858 544.310569047304 549.315167363985 81.339 0.52057 81.339 81.024 81.545 7.6294E-06 140 44 4 0 0 0 0.027097 1 49656 47.198 47.198 1 0.84792 0.84255 0 16193000 10609000 5584500 20406 77 7707 7885 32018 32018 LEPSTSTDQPVTPEPTSQATR 21 0 1 Unmodified _LEPSTSTDQPVTPEPTSQATR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1122.0458 2 1121.54532 2241.07608 NaN NaN NaN 0.057996 6.5046E-05 NaN NaN NaN NaN 53.519 0.36613 53.519 53.303 53.669 -3.8147E-06 0 0 0 0.00028352 1 29999 50.155 37.018 1 NaN NaN 0 5017300 5017300 0 20407 1738 7708 7886 32019 32019 LEPSTSTDQPVTPEPTSQATR 21 0 1 Unmodified _LEPSTSTDQPVTPEPTSQATR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1127.0507 2 1121.54532 2241.07608 58556.85 0.42806 0.00048009 0.20369 0.00022845 0.63175 0.00070853 1121.5457853853 1127.05049597684 52.486 0.42677 52.486 52.303 52.73 3.8147E-06 126 32 6 0 0 0 8.2821E-05 4 29886 40.025 40.025 1 0.54979 0.54367 0 12500000 7973200 4526900 20408 1738 7708 7886 32020;32021;32022;32023 32022 LEPSTSTDQPVTPEPTSQATR 21 0 1 Unmodified _LEPSTSTDQPVTPEPTSQATR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1122.0468 2 1121.54532 2241.07608 58420.27 -0.1401 -0.00015713 0.030035 3.3686E-05 -0.11007 -0.00012345 1122.04622753808 1126.55026517767 62.499 0.51148 62.499 62.216 62.727 0 179 40 7 0 0 0 0.00010735 1 32088 37.156 37.156 1 0.37101 0.31639 0 5596300 3369100 2227100 20409 1738 7708 7886 32024 32024 LEPTNVQTVTCSPR 14 0 1 Unmodified _LEPTNVQTVTCSPR_ 0 0 0 B2R935;A0A024R1S2;Q99741;J3KTI7;J3QR52;J3QLN7 B2R935 B2R935 CDC6 Cell division control protein 6 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.4004 2 801.401229 1600.78791 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.329 1 51.329 50.829 51.829 -3.8147E-06 0 0 0 0.0026193 1 29086 61.344 40.644 1 20410 85 7709 7887 32025 32025 LEQDEYALR 9 0 1 Unmodified _LEQDEYALR_ 0 0 0 P55084;B4DY96;F5GZQ3;D6W539;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.7831 2 568.782753 1135.55095 80731.02 0.72672 0.00041335 0.002518 1.4322E-06 0.72924 0.00041478 568.782810421781 573.786951180099 44.178 0.64076 44.178 43.828 44.469 0 167 57 4 0 0 0 3.4163E-05 2 23675 112.41 56.289 1 1.3808 1.401 0 28864000 11579000 17285000 20411 1615 7710 7888 32026;32027 32026 LEQDEYALR 9 0 1 Unmodified _LEQDEYALR_ 0 0 0 P55084;B4DY96;F5GZQ3;D6W539;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.7833 2 568.782753 1135.55095 NaN NaN NaN 0.11056 6.2886E-05 NaN NaN NaN NaN 43.426 0.49392 43.426 43.214 43.708 3.8147E-06 0 0 0 4.3018E-11 1 23588 133.86 74.881 1 NaN NaN 0 12737000 12737000 0 20412 1615 7710 7888 32028 32028 LEQDEYALR 9 0 1 Unmodified _LEQDEYALR_ 0 0 0 P55084;B4DY96;F5GZQ3;D6W539;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.7829 2 568.782753 1135.55095 NaN NaN NaN -1.5746 -0.0008956 NaN NaN NaN NaN 51.183 0.57537 51.183 50.903 51.479 0 0 0 0 0.00014296 1 25152 96.253 40.242 1 NaN NaN 0 1922800 1922800 0 20413 1615 7710 7888 32029 32029 LEQDEYALR 9 0 1 Unmodified _LEQDEYALR_ 0 0 0 P55084;B4DY96;F5GZQ3;D6W539;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.7828 2 568.782753 1135.55095 NaN NaN NaN -1.5286 -0.00086946 NaN NaN NaN NaN 51.585 0.67728 51.585 51.276 51.953 0 0 0 0 0.0076416 1 24783 69.825 31.033 1 NaN NaN 0 1618000 1618000 0 20414 1615 7710 7888 32030 32030 LEQEIATYR 9 0 1 Unmodified _LEQEIATYR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__A2A4G1;Q13092;CON__Q9Z2K1;CON__Q3ZAW8;A8MT21;CON__P35900;CON__Q9D312;P35900;CON__Q8N1A0;Q8N1A0;CON__Q04695;Q04695;F5GWP8;Q14666;B4DE59;CON__P08779;P08779;CON__Q61782 CON__P02533;CON__Q04695;B4DE59;CON__P08779;CON__Q61782 CON__P02533 KRT14;K14;KRT15;KRT20;KRT222;KRT17;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 20;Keratin-like protein KRT222;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.7975 2 561.793121 1121.57169 79665.29 0.55262 0.00031046 0.11818 6.6393E-05 0.6708 0.00037685 561.792921575528 566.796998863277 58.817 0.78668 58.817 58.399 59.186 3.8147E-06 197 49 5 0 0 0 0.027097 1 33387 47.198 13.401 1 1.2523 1.2808 0 18991000 9577100 9414300 + 20415 1150;1159;1168;964;1176 7711 7889 32031 32031 LEQEIATYR 9 0 1 Unmodified _LEQEIATYR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__A2A4G1;Q13092;CON__Q9Z2K1;CON__Q3ZAW8;A8MT21;CON__P35900;CON__Q9D312;P35900;CON__Q8N1A0;Q8N1A0;CON__Q04695;Q04695;F5GWP8;Q14666;B4DE59;CON__P08779;P08779;CON__Q61782 CON__P02533;CON__Q04695;B4DE59;CON__P08779;CON__Q61782 CON__P02533 KRT14;K14;KRT15;KRT20;KRT222;KRT17;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 20;Keratin-like protein KRT222;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.7952 2 561.793121 1121.57169 NaN NaN NaN 0.50886 0.00028587 NaN NaN NaN NaN 42.826 1.067 42.826 42.317 43.384 0 0 0 0 5.7217E-06 1 22684 116.37 64.584 1 NaN NaN 0 19640000 19640000 0 + 20416 1150;1159;1168;964;1176 7711 7889 32032 32032 LEQEIATYR 9 0 1 Unmodified _LEQEIATYR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__A2A4G1;Q13092;CON__Q9Z2K1;CON__Q3ZAW8;A8MT21;CON__P35900;CON__Q9D312;P35900;CON__Q8N1A0;Q8N1A0;CON__Q04695;Q04695;F5GWP8;Q14666;B4DE59;CON__P08779;P08779;CON__Q61782 CON__P02533;CON__Q04695;B4DE59;CON__P08779;CON__Q61782 CON__P02533 KRT14;K14;KRT15;KRT20;KRT222;KRT17;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 20;Keratin-like protein KRT222;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.795 2 561.793121 1121.57169 NaN NaN NaN 0.63677 0.00035773 NaN NaN NaN NaN 42.265 0.76565 42.265 41.895 42.66 0 0 0 0 7.5815E-06 1 22603 115.7 67.85 1 NaN NaN 0 47906000 47906000 0 + 20417 1150;1159;1168;964;1176 7711 7889 32033 32033 LEQELFSGGNTGINFEK 17 1 0 Unmodified _LEQELFSGGNTGINFEK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4;A0A0J9YYH6 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.9713 2 941.962705 1881.91086 62688.14 0.72823 0.00068596 -0.12425 -0.00011704 0.60398 0.00056892 941.962461452565 945.969663694894 98.869 0.79284 98.869 98.496 99.289 0 376 64 8 0 0 0 1.7678E-05 2 60265 84.173 84.173 1 1.7308 1.9409 0 65744000 23788000 41956000 20418 522 7712 7890 32034;32035 32034 LEQELFSGGNTGINFEK 17 1 0 Unmodified _LEQELFSGGNTGINFEK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4;A0A0J9YYH6 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.9708 2 941.962705 1881.91086 62844.87 0.71957 0.00067781 -0.05286 -4.9792E-05 0.66671 0.00062801 942.464154843535 945.969663436971 98.186 0.70512 98.186 97.838 98.543 0 401 62 9 0 0 0 3.1428E-09 2 61236 107.14 107.14 1 1.6123 1.8016 0 88452000 33106000 55346000 20419 522 7712 7890 32036;32037 32036 LEQELFSGGNTGINFEK 17 1 0 Unmodified _LEQELFSGGNTGINFEK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4;A0A0J9YYH6 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 945.9705 2 941.962705 1881.91086 62646.92 0.82964 0.00078149 0.023456 2.2095E-05 0.85309 0.00080358 942.464586583761 946.47133383814 111.46 0.62464 111.46 111.3 111.92 0 175 34 9 0 0 0 7.7692E-18 3 64576 126.56 126.56 1 1.2247 0.96952 0 18470000 7828500 10642000 20420 522 7712 7890 32038;32039;32040 32039 LEQELFSGGNTGINFEK 17 1 0 Unmodified _LEQELFSGGNTGINFEK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4;A0A0J9YYH6 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 942.465 2 941.962705 1881.91086 63081.39 0.63275 0.00059603 0.11387 0.00010726 0.74662 0.00070329 942.464390995194 945.969779901512 111.4 0.52232 111.4 111.19 111.71 -7.6294E-06 160 28 8 0 0 0 6.6656E-05 3 63584 73.022 73.022 1 1.3001 1.0444 0 15692000 6655100 9037300 20421 522 7712 7890 32041;32042;32043 32043 LEQELTEGR 9 0 1 Unmodified _LEQELTEGR_ 0 0 0 A0A024RCP3;Q12899;A2AE48;A0A0G2JIW2 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.7742 2 537.774928 1073.5353 82338.38 0.028626 1.5394E-05 -0.93148 -0.00050093 -0.90286 -0.00048553 537.774051823935 542.779152796215 29.187 0.19317 29.187 29.069 29.262 0 47 11 5 0 0 0 8.915E-06 2 14074 128.38 61.701 1 0.59321 0.60682 0 35431000 20451000 14979000 20422 365 7713 7891 32044;32045 32044 LEQELTEGR 9 0 1 Unmodified _LEQELTEGR_ 0 0 0 A0A024RCP3;Q12899;A2AE48;A0A0G2JIW2 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.2751 2 537.774928 1073.5353 NaN NaN NaN -2.2025 -0.0011844 NaN NaN NaN NaN 33.354 0.13538 33.354 33.292 33.427 0 0 0 0 0.042501 1 14104 49.444 20.068 1 NaN NaN 0 1407300 1407300 0 20423 365 7713 7891 32046 32046 LEQGGTADGLR 11 0 1 Unmodified _LEQGGTADGLR_ 0 0 0 O43290;B4DDH9 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.7902 2 558.785827 1115.5571 81915.72 0.57917 0.00032363 -0.07818 -4.3686E-05 0.50099 0.00027994 558.785941434512 563.789934580075 25.354 0.23336 25.354 25.236 25.469 0 51 11 7 0 0 0 0.00012288 1 10992 96.143 75.443 1 0.89934 0.93904 0 13263000 6859100 6403900 20424 1384 7714 7892 32047 32047 LEQGGTADGLR 11 0 1 Unmodified _LEQGGTADGLR_ 0 0 0 O43290;B4DDH9 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.7905 2 558.785827 1115.5571 80977.74 0.87697 0.00049004 0.30606 0.00017102 1.183 0.00066106 558.785812494242 563.789989232555 25.142 0.23937 25.142 25.012 25.251 0 35 8 6 0 0 0 6.7214E-10 2 10771 127.4 96.324 1 1.0018 0.99191 0 15491000 7822200 7668800 20425 1384 7714 7892 32048;32049 32048 LEQGGTADGLR 11 0 1 Unmodified _LEQGGTADGLR_ 0 0 0 O43290;B4DDH9 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.7898 2 558.785827 1115.5571 83448.98 0.2329 0.00013014 -0.32847 -0.00018355 -0.095571 -5.3404E-05 558.785556159282 563.789613296125 28.334 0.28119 28.334 28.185 28.466 0 32 12 4 0 0 0 0.0024553 2 10759 61.593 53.662 1 0.70418 0.60555 0 1050900 684310 366580 20426 1384 7714 7892 32050;32051 32050 LEQGQAIDDLMPAQK 15 1 0 Oxidation (M) _LEQGQAIDDLM(ox)PAQK_ LEQGQAIDDLM(1)PAQK LEQGQAIDDLM(67.38)PAQK 0 1 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 840.9218 2 836.914169 1671.81379 NaN NaN NaN 0.18788 0.00015724 NaN NaN NaN NaN 60.689 0.29907 60.689 60.559 60.858 0 0 0 0 0.0002611 1 34675 67.385 54.429 1 NaN NaN 0 4388400 0 4388400 20427 557 7715 7893 32052 32052 413 LEQGQAIDDLMPAQK 15 1 0 Oxidation (M) _LEQGQAIDDLM(ox)PAQK_ LEQGQAIDDLM(1)PAQK LEQGQAIDDLM(46.38)PAQK 0 1 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 840.9218 2 836.914169 1671.81379 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.005 1 60.005 59.505 60.505 0 0 0 0 0.0052536 1 34233 46.378 31.917 1 20428 557 7715 7893 32053 32053 413 LEQGQAIDDLMPAQK 15 1 0 Oxidation (M) _LEQGQAIDDLM(ox)PAQK_ LEQGQAIDDLM(1)PAQK LEQGQAIDDLM(42.03)PAQK 0 1 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.9219 2 836.914169 1671.81379 NaN NaN NaN -0.52808 -0.00044196 NaN NaN NaN NaN 59.02 0.066505 59.02 58.982 59.048 0 0 0 0 0.0069739 1 34339 42.031 27.351 1 NaN NaN 0 2462000 0 2462000 20429 557 7715 7893 32054 32054 413 LEQGQAIDDLMPAQK 15 1 0 Oxidation (M) _LEQGQAIDDLM(ox)PAQK_ LEQGQAIDDLM(1)PAQK LEQGQAIDDLM(120.84)PAQK 0 1 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.9212 2 836.914169 1671.81379 NaN NaN NaN -0.47824 -0.00040025 NaN NaN NaN NaN 59.912 0.28518 59.912 59.765 60.05 0 0 0 0 3.715E-16 2 34939 120.84 100.05 1 NaN NaN 0 7017400 0 7017400 20430 557 7715 7893 32055;32056 32056 413 LEQIAAEQK 9 1 0 Unmodified _LEQIAAEQK_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.2897 2 515.282389 1028.55022 84964.97 0.25202 0.00012986 -0.22261 -0.00011471 0.02941 1.5155E-05 515.282245596343 519.28962259494 25.769 0.38008 25.769 25.543 25.923 0 112 20 7 0 0 0 1.1093E-11 1 11292 154.49 62.862 1 1.1723 1.2609 0 38669000 15637000 23033000 20431 741 7716 7894 32057 32057 LEQIAAEQK 9 1 0 Unmodified _LEQIAAEQK_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.2897 2 515.282389 1028.55022 84407.99 0.80544 0.00041503 -0.075265 -3.8782E-05 0.73018 0.00037625 515.282597234269 519.289685215262 25.459 0.4037 25.459 25.185 25.589 0 74 15 8 0 0 0 3.8707E-06 1 11106 133.86 61.724 1 1.0269 1.1392 0 48142000 24135000 24007000 20432 741 7716 7894 32058 32058 LEQIAAEQK 9 1 0 Unmodified _LEQIAAEQK_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.2894 2 515.282389 1028.55022 84757.98 -0.031329 -1.6143E-05 -0.017871 -9.2086E-06 -0.0492 -2.5352E-05 515.282389604723 519.289560773702 28.67 0.43474 28.67 28.391 28.826 0 101 28 5 0 0 0 0.040397 1 10975 41.876 19.745 1 0.57788 0.47935 0 1792200 1173200 619060 20433 741 7716 7894 32059 32059 LEQIDGHIAEHNSK 14 1 0 Unmodified _LEQIDGHIAEHNSK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.9052 2 795.897168 1589.77978 66645.4 0.39908 0.00031763 -0.035842 -2.8527E-05 0.36324 0.0002891 795.897181928246 799.904132007629 24.782 0.27287 24.782 24.594 24.867 0 55 12 6 0 0 0 3.268E-57 2 10436 192.18 192.18 1 0.90148 0.98551 0 51306000 26836000 24470000 20434 2070 7717 7895 32060;32061 32061 LEQIDGHIAEHNSK 14 1 0 Unmodified _LEQIDGHIAEHNSK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.9337 3 530.933871 1589.77978 81812.8 0.069507 3.6903E-05 0.12095 6.4218E-05 0.19046 0.00010112 530.933797076987 533.60519487007 24.758 0.62051 24.758 24.566 25.187 0 137 30 9 0 0 0 9.8493E-10 2 10519 97.836 97.836 1 0.94173 1.0761 0 181840000 99580000 82259000 20435 2070 7717 7895 32062;32063 32063 LEQIDGHIAEHNSK 14 1 0 Unmodified _LEQIDGHIAEHNSK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.9338 3 530.933871 1589.77978 82925.81 0.16766 8.9016E-05 -0.33431 -0.0001775 -0.16665 -8.8483E-05 530.933917732333 533.605200074419 24.233 0.5411 24.233 24.053 24.594 -1.9073E-06 138 23 11 0 0 0 5.5418E-30 2 9957 132.05 132.05 1 0.85782 0.97628 0 147270000 80182000 67087000 20436 2070 7717 7895 32064;32065 32064 LEQIDGHIAEHNSK 14 1 0 Unmodified _LEQIDGHIAEHNSK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.8968 2 795.897168 1589.77978 67957.25 0.49255 0.00039202 0.23024 0.00018325 0.72279 0.00057527 795.897435935953 799.904452894393 24.239 0.28877 24.239 24.095 24.384 0 48 10 7 0 0 0 1.3099E-132 2 10018 257.2 257.2 1 0.81496 0.88447 0 22256000 11312000 10944000 20437 2070 7717 7895 32066;32067 32067 LEQIDGHIAEHNSK 14 1 0 Unmodified _LEQIDGHIAEHNSK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.9337 3 530.933871 1589.77978 81700.52 0.40026 0.00021251 -0.41339 -0.00021948 -0.013128 -6.9701E-06 530.933705839915 533.604998198746 27.464 0.70496 27.464 27.292 27.997 0 160 28 11 0 0 0 1.1251E-06 2 10676 81.448 81.448 1 1.7973 1.4576 0 25746000 9096400 16649000 20438 2070 7717 7895 32068;32069 32068 LEQIDGHIAEHNSK 14 1 0 Unmodified _LEQIDGHIAEHNSK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.6054 3 530.933871 1589.77978 82629.8 0.13414 7.1221E-05 -0.35091 -0.00018631 -0.21677 -0.00011509 530.933689821878 533.605044574473 27.476 0.90733 27.476 27.249 28.156 0 152 33 9 0 0 0 6.2701E-05 3 10171 65.511 65.511 1 1.7626 1.4159 0 15701000 5363900 10337000 20439 2070 7717 7895 32070;32071;32072 32072 LEQLFQDEVAK 11 1 0 Unmodified _LEQLFQDEVAK_ 0 0 0 Q15149;D3DWL0;H0YDN1 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3529 2 660.345717 1318.67688 NaN NaN NaN 0.42448 0.0002803 NaN NaN NaN NaN 75.9 0.4527 75.9 75.613 76.066 0 0 0 0 4.0351E-08 1 45643 112.75 77.941 1 NaN NaN 0 20252000 0 20252000 20440 1754 7718 7896 32073 32073 LEQPDLSSEMSK 12 1 0 Oxidation (M) _LEQPDLSSEM(ox)SK_ LEQPDLSSEM(1)SK LEQPDLSSEM(74.96)SK 0 1 0 Q8WUA4;Q53QN0;A0A087WZD8;C9JNH7 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.3297 2 690.321582 1378.62861 74725.59 0.97313 0.00067177 -0.14112 -9.742E-05 0.832 0.00057435 690.321702403634 694.328812200552 38.208 0.40502 38.208 38.007 38.412 0 127 34 5 0 0 0 8.7845E-05 2 19542 74.962 51.847 1 1.1586 1.2005 0 17084000 8053200 9030700 20441 1938 7719 7897 32074;32075 32074 1774 LEQPDLSSEMSK 12 1 0 Oxidation (M) _LEQPDLSSEM(ox)SK_ LEQPDLSSEM(1)SK LEQPDLSSEM(55.72)SK 0 1 0 Q8WUA4;Q53QN0;A0A087WZD8;C9JNH7 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.3218 2 690.321582 1378.62861 73382.39 0.4733 0.00032673 -0.018079 -1.2481E-05 0.45522 0.00031425 690.321714135217 694.328933223307 37.341 0.45671 37.341 37.119 37.575 0 140 37 5 0 0 0 0.0017269 2 19350 55.721 36.45 1 1.1125 1.1188 0 27208000 12899000 14309000 20442 1938 7719 7897 32076;32077 32077 1774 LEQQSVPAAVFGSLK 15 1 0 Unmodified _LEQQSVPAAVFGSLK_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.441 2 787.432855 1572.85116 73105.69 0.3746 0.00029497 0.71736 0.00056487 1.092 0.00085984 787.433705977507 791.440119586767 102.68 0.44482 102.68 102.44 102.88 0 110 38 4 0 0 0 0.00062128 2 63324 53.569 53.569 1 1.1592 1.1623 0 7591400 3472600 4118800 20443 1838 7720 7898 32078;32079 32079 LEQQSVPAAVFGSLK 15 1 0 Unmodified _LEQQSVPAAVFGSLK_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.439 2 787.432855 1572.85116 73998.39 0.44656 0.00035164 0.2996 0.00023592 0.74616 0.00058755 787.43292839553 791.439879770999 101.97 0.42014 101.97 101.73 102.15 0 120 32 6 0 0 0 0.00054215 3 64215 55.261 55.261 1 1.2681 1.2658 0 14273000 6255800 8017200 20444 1838 7720 7898 32080;32081;32082 32080 LERPPETPTVDPTVK 15 1 1 Unmodified _LERPPETPTVDPTVK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.3055 3 560.305193 1677.89375 80343.25 0.5941 0.00033288 0.10654 5.9696E-05 0.70064 0.00039257 560.305309239524 566.312501448005 55.299 0.82038 55.299 54.865 55.685 3.8147E-06 456 76 7 0 0 0 0.00010132 2 31009 62.861 62.861 1 0.77065 0.92858 0 113310000 69496000 43818000 20445 515 7721 7899 32083;32084 32084 LERPPETPTVDPTVK 15 1 1 Unmodified _LERPPETPTVDPTVK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.3053 3 560.305193 1677.89375 79071.88 0.5439 0.00030475 -0.28808 -0.00016141 0.25582 0.00014334 560.639386214869 566.312315722794 54.005 0.82374 54.005 53.689 54.513 0 419 73 8 0 0 0 0.0002445 2 30813 55.531 44.587 1 0.7601 0.89715 0 127960000 71835000 56128000 20446 515 7721 7899 32085;32086 32086 LERPPETPTVDPTVK 15 1 1 Unmodified _LERPPETPTVDPTVK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.3131 3 560.305193 1677.89375 80406.45 0.47794 0.00026779 0.10445 5.8526E-05 0.5824 0.00032632 560.305172618287 566.312756510499 64.504 0.82559 64.504 64.083 64.908 0 305 59 8 0 0 0 0.042151 1 33132 20.939 18.921 1 1.7878 1.5252 0 9721400 3291700 6429700 20447 515 7721 7899 32087 32087 LERPPETPTVDPTVK 15 1 1 Unmodified _LERPPETPTVDPTVK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.3127 3 560.305193 1677.89375 79721.28 0.3459 0.00019381 -0.01549 -8.6791E-06 0.33041 0.00018513 560.305135620769 566.312654883993 64.981 0.79929 64.981 64.581 65.381 0 328 62 7 0 0 0 0.015725 1 32807 25.823 23.396 1 1.853 1.5628 0 8658700 3279500 5379200 20448 515 7721 7899 32088 32088 LESDYEILER 10 0 1 Unmodified _LESDYEILER_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8188 2 633.81425 1265.61395 78327.08 0.35153 0.00022281 0.2575 0.00016321 0.60904 0.00038602 633.814650764275 638.818462829854 74.662 0.71529 74.662 74.344 75.059 0 218 58 5 0 0 0 1.5494E-05 1 43939 101.11 70.851 1 1.6102 1.6661 0 20325000 9280900 11044000 20449 1561 7722 7900 32089 32089 LESDYEILER 10 0 1 Unmodified _LESDYEILER_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.8183 2 633.81425 1265.61395 78516.91 0.49424 0.00031326 -0.02568 -1.6276E-05 0.46856 0.00029698 633.814157309887 638.818580092576 85.266 0.52216 85.266 84.96 85.483 0 138 34 6 0 0 0 0.00038819 2 46560 87.913 58.826 1 0.66848 0.55876 0 3491900 2370700 1121200 20450 1561 7722 7900 32090;32091 32091 LESDYEILER 10 0 1 Unmodified _LESDYEILER_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.8149 2 633.81425 1265.61395 78324.06 0.6644 0.0004211 0.43864 0.00027801 1.103 0.00069912 633.814368267906 638.818890403415 85.425 0.47912 85.425 85.179 85.658 0 124 29 6 0 0 0 0.00069328 1 45863 82.749 60.009 1 0.80921 0.68942 0 4568400 2444500 2123900 20451 1561 7722 7900 32092 32092 LESEEEGVPSTAIR 14 0 1 Unmodified _LESEEEGVPSTAIR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.8817 2 758.87811 1515.74167 68888.66 0.68806 0.00052215 -0.063806 -4.8421E-05 0.62425 0.00047373 758.878363823519 763.882502567644 55.484 0.61546 55.484 55.175 55.79 -3.8147E-06 249 52 6 0 0 0 3.7969E-14 2 31071 125.72 120.03 1 1.3515 1.5181 0 93686000 38843000 54843000 20452 25 7723 7901 32093;32094 32093 LESEEEGVPSTAIR 14 0 1 Unmodified _LESEEEGVPSTAIR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.8845 2 758.87811 1515.74167 69591.99 0.76631 0.00058153 -0.0605 -4.5912E-05 0.70581 0.00053562 758.877972350022 763.882133953668 54.676 0.7156 54.676 54.276 54.992 0 304 59 6 0 0 0 1.1674E-69 2 31131 203.03 203.03 1 1.2813 1.4714 0 78732000 35334000 43398000 20453 25 7723 7901 32095;32096 32096 LESEGSPETLTNLR 14 0 1 Unmodified _LESEGSPETLTNLR_ 0 0 0 Q9P035;H3BRL8;H3BPZ1;H3BS72;H3BMZ1 Q9P035 Q9P035 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.39 2 773.391384 1544.76822 68100.38 0.79427 0.00061428 -1.2364 -0.00095624 -0.44216 -0.00034196 773.390562158525 778.394553334668 69.182 0.61455 69.182 68.885 69.5 0 143 53 5 0 0 0 0.00020564 2 40101 68.536 58.881 1 0.94493 0.95939 0 18253000 8700600 9552100 20454 2091 7724 7902 32097;32098 32097 LESEGSPETLTNLR 14 0 1 Unmodified _LESEGSPETLTNLR_ 0 0 0 Q9P035;H3BRL8;H3BPZ1;H3BS72;H3BMZ1 Q9P035 Q9P035 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.3912 2 773.391384 1544.76822 67116.29 0.62734 0.00048518 -1.7538 -0.0013564 -1.1265 -0.00087122 773.391270364977 778.395080517894 68.055 0.49728 68.055 67.835 68.333 -7.6294E-06 128 41 5 0 0 0 0.0031935 1 40267 47.559 37.036 1 0.95494 0.96917 0 20316000 10973000 9342800 20455 2091 7724 7902 32099 32099 LESEHPDQAQAILSR 15 0 1 Unmodified _LESEHPDQAQAILSR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.2881 3 565.288314 1692.84311 80662.77 0.60027 0.00033933 0.060265 3.4067E-05 0.66054 0.00037339 565.288345083978 568.62437650364 47.718 0.4495 47.718 47.475 47.925 0 200 40 7 0 0 0 0.00013465 1 25868 57.499 57.499 1 1.5209 1.681 0 57409000 21313000 36096000 20456 415 7725 7903 32100 32100 LESEHPDQAQAILSR 15 0 1 Unmodified _LESEHPDQAQAILSR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.288 3 565.288314 1692.84311 80675.82 0.81589 0.00046121 0.26343 0.00014891 1.0793 0.00061013 565.622772174531 568.624511178959 46.365 0.57674 46.365 46.147 46.724 0 213 44 8 0 0 0 0.00010809 1 25652 59.345 59.345 1 1.7265 1.9331 0 45013000 17456000 27557000 20457 415 7725 7903 32101 32101 LESENDEYER 10 0 1 Unmodified _LESENDEYER_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.277 2 642.272946 1282.53134 76255.38 0.4881 0.00031349 0.54868 0.00035241 1.0368 0.0006659 642.272953532752 647.277992461076 20.732 0.32758 20.732 20.585 20.912 0 69 13 8 0 0 0 1.5325E-09 2 7076 131.44 126.47 1 1.1129 1.1385 0 32792000 11952000 20840000 20458 1418 7726 7904 32102;32103 32102 LESGMQNMSIHTK 13 1 0 2 Oxidation (M) _LESGM(ox)QNM(ox)SIHTK_ LESGM(1)QNM(1)SIHTK LESGM(89.43)QNM(89.43)SIHTK 0 2 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__REFSEQ:XP_092267 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.9059 3 503.234164 1506.68066 83642.5 0.51839 0.00026087 -0.902 -0.00045392 -0.38361 -0.00019304 503.234071899974 505.905411401077 16.27 0.57676 16.27 16.083 16.66 0 171 29 9 0 0 0 6.071E-05 1 3616 89.43 87.887 1 1.665 1.6311 0 21649000 7919600 13729000 + 20459 1156 7727 7905 32104 32104 865;866 LESGMQNMSIHTK 13 1 0 2 Oxidation (M) _LESGM(ox)QNM(ox)SIHTK_ LESGM(1)QNM(1)SIHTK LESGM(59.43)QNM(59.43)SIHTK 0 2 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__REFSEQ:XP_092267 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.3492 2 754.347608 1506.68066 69346.46 0.7412 0.00055913 -0.41934 -0.00031633 0.32187 0.0002428 754.347773271103 758.35503041767 16.24 0.46939 16.24 16.099 16.568 0 142 24 9 0 0 0 0.0012489 1 3634 59.426 59.426 1 1.5662 1.6316 0 14946000 5737600 9208100 + 20460 1156 7727 7905 32105 32105 865;866 LESGMQNMSIHTK 13 1 0 2 Oxidation (M) _LESGM(ox)QNM(ox)SIHTK_ LESGM(1)QNM(1)SIHTK LESGM(53.75)QNM(53.75)SIHTK 0 2 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__REFSEQ:XP_092267 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.2343 3 503.234164 1506.68066 85018.34 -0.20744 -0.00010439 -0.075774 -3.8132E-05 -0.28321 -0.00014252 503.234321250428 505.905640176243 16.212 0.68316 16.212 15.971 16.654 0 210 40 8 0 0 0 0.0010737 2 3427 53.754 53.754 1 1.9195 1.9184 0 15261000 5195400 10066000 + 20461 1156 7727 7905 32106;32107 32107 865;866 LESGMQNMSIHTK 13 1 0 2 Oxidation (M) _LESGM(ox)QNM(ox)SIHTK_ LESGM(1)QNM(1)SIHTK LESGM(64.3)QNM(64.3)SIHTK 0 2 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__REFSEQ:XP_092267 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.3474 2 754.347608 1506.68066 71446.21 0.079744 6.0155E-05 0.32962 0.00024865 0.40937 0.00030881 754.348132446043 758.355471567464 16.196 0.47744 16.196 15.971 16.448 0 132 30 6 0 0 0 0.0003913 2 3413 64.297 64.297 1 1.7372 1.8072 0 11115000 3642300 7472300 + 20462 1156 7727 7905 32108;32109 32109 865;866 LESLDALEPEEK 12 1 0 Unmodified _LESLDALEPEEK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;Q14985;O60846 Q14807 Q14807 KIF22;OBP-2;A-328A3.5 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.8531 2 686.845747 1371.67694 72662.48 0.67364 0.00046269 0.091322 6.2724E-05 0.76496 0.00052541 686.845722105521 690.852815084409 78.063 0.55988 78.063 77.76 78.32 0 175 44 6 0 0 0 1.4895E-13 2 46114 136.96 117.69 1 0.96519 0.94775 0 23106000 10403000 12702000 20463 1745 7728 7906 32110;32111 32110 LESLDALEPEEK 12 1 0 Unmodified _LESLDALEPEEK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;Q14985;O60846 Q14807 Q14807 KIF22;OBP-2;A-328A3.5 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.8445 2 686.845747 1371.67694 74082.35 0.44393 0.00030491 0.23038 0.00015824 0.67431 0.00046315 686.845777393807 690.852850299151 77.115 0.44181 77.115 76.893 77.335 0 168 35 6 0 0 0 9.4492E-05 2 46511 96.113 79.065 1 0.7728 0.77998 0 28350000 16387000 11963000 20464 1745 7728 7906 32112;32113 32113 LESLDALEPEEK 12 1 0 Unmodified _LESLDALEPEEK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;Q14985;O60846 Q14807 Q14807 KIF22;OBP-2;A-328A3.5 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 690.8525 2 686.845747 1371.67694 72933.86 0.65318 0.00044863 0.90935 0.00062459 1.5625 0.0010732 687.348445537409 690.852812446238 89.39 0.67992 89.39 89.02 89.7 0 161 43 6 0 0 0 0.0056322 3 49260 50.452 44.149 1 1.1003 0.87279 0 4544000 2284800 2259300 20465 1745 7728 7906 32114;32115;32116 32114 LESLDALEPEEK 12 1 0 Unmodified _LESLDALEPEEK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;Q14985;O60846 Q14807 Q14807 KIF22;OBP-2;A-328A3.5 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.8542 2 686.845747 1371.67694 73934.23 0.29705 0.00020403 1.0937 0.00075123 1.3908 0.00095526 686.846662084394 690.85319900043 89.338 0.68124 89.338 89.041 89.722 7.6294E-06 157 42 6 0 0 0 0.0036902 3 48462 55.401 46.707 1 0.77301 0.6289 0 4532300 2334500 2197700 20466 1745 7728 7906 32117;32118;32119 32117 LESLSAATTFEPLEPVK 17 1 0 Unmodified _LESLSAATTFEPLEPVK_ 0 0 0 Q8N1F7;H3BVG0;H3BV11;H3BRI8;H3BM93;H3BNN5 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 916.4924 2 916.488024 1830.9615 66083.91 0.71469 0.000655 0.065307 5.9854E-05 0.77999 0.00071486 916.488899269113 920.99644397856 122.02 0.33086 122.02 121.81 122.14 0 64 16 6 0 0 0 0.00032717 2 72674 48.659 48.659 1 1.0541 0.82005 0 3687700 1607200 2080500 20467 1904 7729 7907 32120;32121 32120 LESLSAATTFEPLEPVK 17 1 0 Unmodified _LESLSAATTFEPLEPVK_ 0 0 0 Q8N1F7;H3BVG0;H3BV11;H3BRI8;H3BM93;H3BNN5 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 920.4952 2 916.488024 1830.9615 65228.29 0.70692 0.00064789 0.082103 7.5246E-05 0.78903 0.00072313 916.989872113831 920.494368664493 121.81 0.4028 121.81 121.58 121.99 7.6294E-06 69 18 7 0 0 0 0.0084974 2 71581 32.734 32.734 1 1.1372 0.93158 0 4966000 2254500 2711500 20468 1904 7729 7907 32122;32123 32122 LESLSYQLSGLQK 13 1 0 Unmodified _LESLSYQLSGLQK_ 0 0 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.4058 2 733.398481 1464.78241 74366.2 0.49419 0.00036244 -0.078663 -5.7691E-05 0.41553 0.00030475 733.900143619065 737.906859365818 88.422 0.50571 88.422 88.149 88.654 0 109 38 4 0 0 0 6.2579E-06 2 53271 104.79 74.183 1 1.2383 1.2139 0 20794000 7051300 13743000 20469 1682 7730 7908 32124;32125 32124 LESLSYQLSGLQK 13 1 0 Unmodified _LESLSYQLSGLQK_ 0 0 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.3982 2 733.398481 1464.78241 74048.13 0.64698 0.0004745 0.35351 0.00025926 1.0005 0.00073376 733.398330530547 737.406218340444 87.611 0.42162 87.611 87.372 87.794 0 124 32 5 0 0 0 0.00014095 2 53968 85.963 66.72 1 1.2902 1.397 0 22467000 11583000 10884000 20470 1682 7730 7908 32126;32127 32127 LESLSYQLSGLQK 13 1 0 Unmodified _LESLSYQLSGLQK_ 0 0 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.4059 2 733.398481 1464.78241 73884.7 0.55296 0.00040554 -0.45709 -0.00033523 0.095875 7.0314E-05 733.397419955192 737.40571894013 101.47 0.44857 101.47 101.12 101.57 0 94 26 6 0 0 0 0.01138 2 56662 40.616 34.013 1 1.6817 1.327 0 3226200 1539500 1686700 20471 1682 7730 7908 32128;32129 32128 LESNNYNTYR 10 0 1 Unmodified _LESNNYNTYR_ 0 0 0 D9ZGF5;A0A087WUF6;P09038 D9ZGF5 D9ZGF5 FGF2 Fibroblast growth factor;Fibroblast growth factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.2973 2 637.294016 1272.57348 77847.79 0.85115 0.00054243 -0.00913 -5.8185E-06 0.84202 0.00053662 637.294400153691 642.297572646837 25.952 0.28308 25.952 25.801 26.084 0 65 17 6 0 0 0 2.8483E-09 1 11440 125.82 101.86 1 1.007 1.0097 0 17909000 7988600 9920500 20472 411 7731 7909 32130 32130 LESNNYNTYR 10 0 1 Unmodified _LESNNYNTYR_ 0 0 0 D9ZGF5;A0A087WUF6;P09038 D9ZGF5 D9ZGF5 FGF2 Fibroblast growth factor;Fibroblast growth factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.2985 2 637.294016 1272.57348 76960.27 0.33089 0.00021087 0.12388 7.8949E-05 0.45477 0.00028982 637.294020410283 642.298172193701 30.487 0.53548 30.487 30.221 30.756 0 121 32 6 0 0 0 0.0015966 1 12121 72.928 64.065 1 0.46177 0.39999 0 3448200 2315400 1132700 20473 411 7731 7909 32131 32131 LESPSFTGTGDTEIAHATEDLENNGSK 27 1 0 Unmodified _LESPSFTGTGDTEIAHATEDLENNGSK_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.7704 3 940.765057 2819.27334 61517.35 1.2165 0.0011444 -1.2636 -0.0011887 -0.047101 -4.4311E-05 941.097768527516 943.769072434175 90.63 0.53228 90.63 90.385 90.917 -7.6294E-06 185 41 6 0 0 0 1.2545E-10 2 55914 56.468 56.468 1 1.5947 1.7612 0 44437000 19140000 25297000 20474 1694 7732 7910 32132;32133 32132 LESPSFTGTGDTEIAHATEDLENNGSK 27 1 0 Unmodified _LESPSFTGTGDTEIAHATEDLENNGSK_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 943.4377 3 940.765057 2819.27334 61482.64 0.62735 0.00059019 -1.4416 -0.0013562 -0.81429 -0.00076606 941.097902476401 944.103789515813 105.3 0.52986 105.3 104.97 105.5 0 154 33 10 0 0 0 0.00055039 1 60053 28.023 28.023 1 1.0666 0.85146 0 6923500 3325000 3598600 20475 1694 7732 7910 32134 32134 LESPSFTGTGDTEIAHATEDLENNGSK 27 1 0 Unmodified _LESPSFTGTGDTEIAHATEDLENNGSK_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 943.7719 3 940.765057 2819.27334 62600.9 0.5755 0.00054141 -0.93499 -0.0008796 -0.35949 -0.0003382 941.097873333472 943.769618387504 105.14 0.56514 105.14 104.76 105.33 7.6294E-06 150 35 8 0 0 0 0.023321 1 59050 17.341 17.341 1 0.94737 0.77292 0 6084400 2417900 3666500 20476 1694 7732 7910 32135 32135 LESPTVSTLTPSSPGK 16 1 0 Unmodified _LESPTVSTLTPSSPGK_ 0 0 0 B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36;Q8NCZ0 B3KMB7 B3KMB7 PYCR2;P5CR2;DKFZp434J218 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.9364 2 800.92506 1599.83557 70175.38 0.81402 0.00065197 0.56634 0.0004536 1.3804 0.0011056 800.925249007932 804.93271791554 71.294 0.50111 71.294 71.078 71.579 0 126 42 5 0 0 0 0.00022597 1 41515 58.674 47.461 1 0.77983 0.76674 0 8686700 5563400 3123300 20477 137 7733 7911 32136 32136 LESPTVSTLTPSSPGK 16 1 0 Unmodified _LESPTVSTLTPSSPGK_ 0 0 0 B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36;Q8NCZ0 B3KMB7 B3KMB7 PYCR2;P5CR2;DKFZp434J218 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.4272 2 800.92506 1599.83557 68703.77 0.54476 0.00043631 0.50268 0.00040261 1.0474 0.00083892 801.426676804637 804.932459687843 70.169 0.49252 70.169 69.926 70.418 0 119 41 5 0 0 0 2.3115E-05 3 41792 85.845 53.322 1 0.76543 0.77737 0 12774000 8228300 4546100 20478 137 7733 7911 32137;32138;32139 32138 LESPTVSTLTPSSPGK 16 1 0 Unmodified _LESPTVSTLTPSSPGK_ 0 0 0 B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36;Q8NCZ0 B3KMB7 B3KMB7 PYCR2;P5CR2;DKFZp434J218 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 800.9248 2 800.92506 1599.83557 69815.98 0.58156 0.00046579 -0.4006 -0.00032085 0.18097 0.00014494 801.425853202168 804.932359027204 81.514 0.48361 81.514 81.259 81.743 0 113 28 6 0 0 0 0.0028188 1 44205 39.267 30.962 1 0.52417 0.43737 0 1793700 1201700 592030 20479 137 7733 7911 32140 32140 LESPTVSTLTPSSPGK 16 1 0 Unmodified _LESPTVSTLTPSSPGK_ 0 0 0 B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36;Q8NCZ0 B3KMB7 B3KMB7 PYCR2;P5CR2;DKFZp434J218 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 800.9256 2 800.92506 1599.83557 70199.77 0.53434 0.00042797 0.62978 0.00050441 1.1641 0.00093238 801.427106040411 804.932891752537 81.793 0.5107 81.793 81.475 81.986 0 111 26 6 0 0 0 0.016231 1 43480 30.572 25.188 1 0.49615 0.39131 0 2298300 1212300 1086000 20480 137 7733 7911 32141 32141 LESTLNYGMER 11 0 1 Oxidation (M) _LESTLNYGM(ox)ER_ LESTLNYGM(1)ER LESTLNYGM(56.55)ER 0 1 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.8163 2 664.811184 1327.60782 NaN NaN NaN 0.30062 0.00019985 NaN NaN NaN NaN 42.613 0.39115 42.613 42.362 42.753 0 0 0 0 0.0037496 1 22929 56.548 37.768 1 NaN NaN 0 9754000 0 9754000 20481 1545 7734 7912 32142 32142 1302 LESVNAELK 9 1 0 Unmodified _LESVNAELK_ 0 0 0 A0A0A0MRJ2;Q5VTZ4;P18847;Q59GS7 A0A0A0MRJ2 A0A0A0MRJ2 ATF3 Cyclic AMP-dependent transcription factor ATF-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.7766 2 501.776939 1001.53933 86561.02 0.41567 0.00020858 0.1583 7.9429E-05 0.57397 0.00028801 501.776931954958 505.784113596516 43.668 1.243 43.668 43.126 44.369 0 444 109 6 0 0 0 0.0015501 1 23221 83.948 40.14 1 0.60847 0.665 0 51159000 27957000 23202000 20482 466 7735 7913 32143 32143 LESVNAELK 9 1 0 Unmodified _LESVNAELK_ 0 0 0 A0A0A0MRJ2;Q5VTZ4;P18847;Q59GS7 A0A0A0MRJ2 A0A0A0MRJ2 ATF3 Cyclic AMP-dependent transcription factor ATF-3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.7843 2 501.776939 1001.53933 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.031 1 43.031 42.531 43.531 0 0 0 0 0.002951 1 23303 78.516 31.434 1 20483 466 7735 7913 32144 32144 LETAVNLAWTAGNSNTR 17 0 1 Unmodified _LETAVNLAWTAGNSNTR_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 914.9659 2 909.460664 1816.90677 63790.28 0.69943 0.0006361 -0.13485 -0.00012264 0.56457 0.00051346 909.961869050964 914.4650148275 91.496 0.47667 91.496 91.208 91.684 7.6294E-06 154 37 7 0 0 0 2.3725E-13 2 55306 123.84 114.88 1 1.3521 1.3753 0 27465000 12435000 15030000 20484 639 7736 7914 32145;32146 32145 LETAVNLAWTAGNSNTR 17 0 1 Unmodified _LETAVNLAWTAGNSNTR_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 914.8712 2 909.460664 1816.90677 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.785 1 91.785 91.285 92.285 7.6294E-06 0 0 0 0.0043976 1 55610 51.875 21.325 1 20485 639 7736 7914 32147 32147 LETAVNLAWTAGNSNTR 17 0 1 Unmodified _LETAVNLAWTAGNSNTR_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.4667 2 909.460664 1816.90677 65118.88 1.1834 0.0010762 -0.33185 -0.0003018 0.85153 0.00077444 910.463496462651 914.464446829921 90.608 0.65189 90.608 90.321 90.972 0 191 52 6 0 0 0 4.5203E-18 3 56043 131.32 131.32 1 1.2899 1.3211 0 20968000 9297000 11671000 20486 639 7736 7914 32148;32149;32150 32150 LETAVNLAWTAGNSNTR 17 0 1 Unmodified _LETAVNLAWTAGNSNTR_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 914.4636 2 909.460664 1816.90677 65688.87 0.34335 0.00031226 -0.41235 -0.00037502 -0.069 -6.2753E-05 909.961811357294 914.966097127259 104.56 0.51299 104.56 104.3 104.82 0 68 28 4 0 0 0 0.0014029 2 58650 41.092 27.664 1 1.7779 1.5376 0 1631900 541870 1090000 20487 639 7736 7914 32151;32152 32151 LETDSRPVSR 10 0 2 Unmodified _LETDSRPVSR_ 0 0 1 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.3075 2 580.306926 1158.5993 77385.05 0.38963 0.0002261 -0.26539 -0.00015401 0.12423 7.2093E-05 580.307015638934 590.314824661473 17.067 0.32055 17.067 16.905 17.225 1.9073E-06 42 9 7 0 0 0 0.0059737 2 4277 76.064 31.617 1 0.99745 1.0776 0 19561000 10070000 9490900 20488 1887 7737 7915 32153;32154 32153 LETDSRPVSR 10 0 2 Unmodified _LETDSRPVSR_ 0 0 1 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.8793 3 387.207043 1158.5993 94738.99 0.0059297 2.296E-06 -0.51147 -0.00019805 -0.50554 -0.00019575 387.206966123806 393.878923065611 17.066 0.51638 17.066 16.905 17.421 0 50 15 8 0 0 0 0.013301 1 4324 43.282 14.555 1 0.9528 1.0321 0 24306000 11389000 12916000 20489 1887 7737 7915 32155 32155 LETHMTPEMFR 11 0 1 2 Oxidation (M) _LETHM(ox)TPEM(ox)FR_ LETHM(1)TPEM(1)FR LETHM(43.54)TPEM(43.54)FR 0 2 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.5524 3 475.216333 1422.62717 88632.52 0.24672 0.00011725 0.0080909 3.8449E-06 0.25481 0.00012109 475.216319493759 478.552469787553 27.979 0.53873 27.979 27.657 28.196 0 151 37 6 0 0 0 0.0092008 1 13179 43.544 43.544 1 3.1065 3.262 0 39536000 9441700 30094000 20490 1691 7738 7916 32156 32156 1512;1513 LETHMTPEMFR 11 0 1 2 Oxidation (M) _LETHM(ox)TPEM(ox)FR_ LETHM(1)TPEM(1)FR LETHM(61.56)TPEM(61.56)FR 0 2 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.3276 2 712.320862 1422.62717 73196.81 0.71839 0.00051172 0.10384 7.3967E-05 0.82223 0.00058569 712.3212135561 717.325257210705 27.933 0.31569 27.933 27.816 28.132 0 53 21 5 0 0 0 0.0033656 1 13170 61.56 61.56 1 2.8365 2.9298 0 20100000 5356900 14743000 20491 1691 7738 7916 32157 32157 1512;1513 LETHMTPEMFR 11 0 1 2 Oxidation (M) _LETHM(ox)TPEM(ox)FR_ LETHM(1)TPEM(1)FR LETHM(71.61)TPEM(71.61)FR 0 2 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.3234 2 712.320862 1422.62717 69368.38 0.47153 0.00033588 -0.39782 -0.00028338 0.073709 5.2504E-05 712.320933459216 717.324829702038 27.292 0.23377 27.292 27.167 27.401 0 57 12 6 0 0 0 0.0010764 2 12587 71.614 71.614 1 3.5275 3.8564 0 35658000 7227800 28430000 20492 1691 7738 7916 32158;32159 32159 1512;1513 LETHMTPEMFR 11 0 1 2 Oxidation (M) _LETHM(ox)TPEM(ox)FR_ LETHM(1)TPEM(1)FR LETHM(89.8)TPEM(89.8)FR 0 2 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.5523 3 475.216333 1422.62717 87149.02 -0.14025 -6.665E-05 0.055858 2.6545E-05 -0.084393 -4.0105E-05 475.216508201057 478.55262317291 27.647 0.63536 27.647 27.441 28.076 1.9073E-06 161 35 7 0 0 0 0.00011855 1 12917 89.805 82.603 1 3.2528 3.7768 0 64136000 15562000 48574000 20493 1691 7738 7916 32160 32160 1512;1513 LETLGSASTSTPGR 14 0 1 Unmodified _LETLGSASTSTPGR_ 0 0 0 A0A024R5D6;B5MBX0;Q96FF9;B3KSI5 A0A024R5D6 A0A024R5D6 CDCA5 Sororin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.8563 2 688.854438 1375.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.439 1 41.439 40.939 41.939 3.8147E-06 0 0 0 0.00075177 1 21837 79.82 51.093 1 20494 178 7739 7917 32161 32161 LETLGSASTSTPGR 14 0 1 Unmodified _LETLGSASTSTPGR_ 0 0 0 A0A024R5D6;B5MBX0;Q96FF9;B3KSI5 A0A024R5D6 A0A024R5D6 CDCA5 Sororin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.8544 2 688.854438 1375.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.493 1 41.493 40.993 41.993 3.8147E-06 0 0 0 0.00017254 1 21879 90.653 59.58 1 20495 178 7739 7917 32162 32162 LETLGSASTSTPGR 14 0 1 Unmodified _LETLGSASTSTPGR_ 0 0 0 A0A024R5D6;B5MBX0;Q96FF9;B3KSI5 A0A024R5D6 A0A024R5D6 CDCA5 Sororin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.3583 2 688.854438 1375.69432 73674.46 0.28233 0.00019448 0.66107 0.00045538 0.9434 0.00064986 689.356659324291 693.858842047184 47.819 0.46328 47.819 47.534 47.997 0 106 29 5 0 0 0 0.00023302 1 23161 64.64 64.64 1 0.63129 0.54651 0 2595100 1676000 919170 20496 178 7739 7917 32163 32163 LETLGSASTSTPGR 14 0 1 Unmodified _LETLGSASTSTPGR_ 0 0 0 A0A024R5D6;B5MBX0;Q96FF9;B3KSI5 A0A024R5D6 A0A024R5D6 CDCA5 Sororin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.8547 2 688.854438 1375.69432 76000.43 0.22421 0.00015445 0.404 0.0002783 0.62821 0.00043275 688.855186827882 693.858775832523 48.189 0.37872 48.189 47.97 48.349 0 104 32 5 0 0 0 7.4152E-05 1 22831 89.403 89.403 1 0.60034 0.51709 0 1677000 953610 723360 20497 178 7739 7917 32164 32164 LETLLQPR 8 0 1 Unmodified _LETLLQPR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4DZ41;B7Z926;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.2946 2 485.290017 968.565481 87682.72 -0.02235 -1.0846E-05 -0.25271 -0.00012264 -0.27506 -0.00013348 485.289597796225 490.293843504036 62.744 0.48131 62.744 62.506 62.988 0 147 46 4 0 0 0 0.0021172 2 36095 102.72 55.652 1 1.203 1.2599 0 12583000 6363000 6220300 20498 162 7740 7918 32165;32166 32165 LETLLQPR 8 0 1 Unmodified _LETLLQPR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4DZ41;B7Z926;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2937 2 485.290017 968.565481 90630.39 0.38082 0.00018481 -0.69489 -0.00033722 -0.31407 -0.00015242 485.289582430155 490.293730359375 61.374 0.49384 61.374 61.129 61.622 0 144 45 5 0 0 0 0.0021172 1 36020 102.72 47.278 1 1.0018 0.99333 0 15809000 6828100 8981000 20499 162 7740 7918 32167 32167 LETLLQPR 8 0 1 Unmodified _LETLLQPR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4DZ41;B7Z926;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 490.2935 2 485.290017 968.565481 85413.77 -0.098227 -4.7669E-05 -0.29887 -0.00014504 -0.39709 -0.0001927 485.290133758816 490.294620305295 71.956 0.39407 71.956 71.746 72.14 0 146 27 8 0 0 0 0.022432 1 37113 57.177 23.381 1 3.0279 2.5091 0 7868200 2294100 5574100 20500 162 7740 7918 32168 32168 LETLVR 6 0 1 Unmodified _LETLVR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.7267 2 365.726521 729.438489 100884.4 0.23676 8.6591E-05 -0.40583 -0.00014842 -0.16907 -6.1832E-05 365.726187801273 370.730488051804 39.287 0.68754 39.287 38.93 39.618 0 166 55 5 0 0 0 0.04031 1 20337 107.55 19.713 1 0.75705 0.77477 0 26272000 14486000 11786000 20501 186;1747 7741 7919 32169 32169 LETNPDIK 8 1 0 Unmodified _LETNPDIK_ 0 0 0 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2511 2 465.250557 928.486562 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.666 1 28.666 28.166 29.166 0 0 0 0 0.041785 1 13732 57.281 17.178 1 20502 125 7742 7920 32170 32170 LETNPDIK 8 1 0 Unmodified _LETNPDIK_ 0 0 0 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.257 2 465.250557 928.486562 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.809 1 28.809 28.309 29.309 -1.9073E-06 0 0 0 0.025116 1 13799 65.252 18.185 1 20503 125 7742 7920 32171 32171 LETNPDIK 8 1 0 Unmodified _LETNPDIK_ 0 0 0 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2506 2 465.250557 928.486562 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.822 1 28.822 28.322 29.322 0 0 0 0 0.02717 1 13807 64.265 31.794 1 20504 125 7742 7920 32172 32172 LETNPDIKPSNVEPMEK 17 2 0 Oxidation (M) _LETNPDIKPSNVEPM(ox)EK_ LETNPDIKPSNVEPM(1)EK LETNPDIKPSNVEPM(86.37)EK 0 1 1 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.9916 3 652.990946 1955.95101 74012.23 0.79389 0.0005184 -0.12181 -7.9538E-05 0.67208 0.00043886 652.990769590443 658.333834326735 47.922 0.52432 47.922 47.616 48.14 0 291 46 8 0 0 0 1.6814E-06 2 25985 86.367 86.367 1 1.1766 1.3887 0 82487000 40834000 41652000 20505 125 7743 7921 32173;32174 32173 109 LETNPDIKPSNVEPMEK 17 2 0 Oxidation (M) _LETNPDIKPSNVEPM(ox)EK_ LETNPDIKPSNVEPM(1)EK LETNPDIKPSNVEPM(100.77)EK 0 1 1 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.3337 3 652.990946 1955.95101 74005.06 0.89988 0.00058761 0.012939 8.4491E-06 0.91281 0.00059606 653.325060215139 658.334008538341 46.632 0.48333 46.632 46.433 46.916 0 238 40 9 0 0 0 1.6929E-09 2 25769 100.77 100.77 1 1.0022 1.163 0 89863000 36964000 52898000 20506 125 7743 7921 32175;32176 32176 109 LETNPDIKPSNVEPMEK 17 2 0 Oxidation (M) _LETNPDIKPSNVEPM(ox)EK_ LETNPDIKPSNVEPM(1)EK LETNPDIKPSNVEPM(41.4)EK 0 1 1 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 986.9966 2 978.98278 1955.95101 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.63 1 46.63 46.13 47.13 -3.8147E-06 0 0 0 0.043317 1 25787 41.401 27.495 1 20507 125 7743 7921 32177 32177 109 LETNPDIKPSNVEPMEK 17 2 0 Oxidation (M) _LETNPDIKPSNVEPM(ox)EK_ LETNPDIKPSNVEPM(1)EK LETNPDIKPSNVEPM(50.65)EK 0 1 1 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5;C9JYH9 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.6691 3 652.990946 1955.95101 73635.53 0.63133 0.00041225 0.24925 0.00016276 0.88057 0.00057501 653.325589392916 658.334429747593 56.305 0.68843 56.305 56.043 56.731 0 204 48 8 0 0 0 4.7816E-05 1 27681 50.653 50.653 1 0.90816 0.77487 0 4952200 2520000 2432200 20508 125 7743 7921 32178 32178 109 LETQVWEAHNPLTDK 15 1 0 Unmodified _LETQVWEAHNPLTDK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q86TR6 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.9724 3 594.300331 1779.87916 80322.77 0.57237 0.00034016 0.20956 0.00012454 0.78193 0.0004647 594.300107475092 596.971865111853 91.941 0.64813 91.941 91.57 92.218 0 176 42 7 0 0 0 0.0063796 1 51137 30.956 30.956 1 1.7049 1.3518 0 4344000 1739800 2604200 20509 1223 7744 7922 32179 32179 LETQVWEAHNPLTDK 15 1 0 Unmodified _LETQVWEAHNPLTDK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q86TR6 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.9731 3 594.300331 1779.87916 80507.78 0.48427 0.0002878 0.21201 0.000126 0.69628 0.0004138 594.299978715343 596.971920210952 91.731 0.71388 91.731 91.328 92.042 0 202 47 8 0 0 0 0.020862 1 50134 22.417 22.417 1 1.7307 1.3637 0 3884600 1433200 2451400 20510 1223 7744 7922 32180 32180 LETSEFFELTSEEK 14 1 0 Unmodified _LETSEFFELTSEEK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.9066 2 844.898708 1687.78286 NaN NaN NaN 0.025788 2.1788E-05 NaN NaN NaN NaN 105.66 0.94025 105.66 105.34 106.28 0 0 0 0 4.2881E-83 1 65396 204 131.57 1 NaN NaN 0 59397000 0 59397000 20511 2103 7745 7923 32181 32181 LETSEFFELTSEEK 14 1 0 Unmodified _LETSEFFELTSEEK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.9061 2 844.898708 1687.78286 NaN NaN NaN 0.0139 1.1744E-05 NaN NaN NaN NaN 117.21 1.1021 117.21 116.9 118 0 0 0 0 5.1329E-10 1 68840 114.76 69.999 1 NaN NaN 0 39821000 0 39821000 20512 2103 7745 7923 32182 32182 LETSEFFELTSEEK 14 1 0 Unmodified _LETSEFFELTSEEK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.9058 2 844.898708 1687.78286 NaN NaN NaN 0.18194 0.00015372 NaN NaN NaN NaN 117.08 1.1673 117.08 116.79 117.95 7.6294E-06 0 0 0 0.00027099 1 68204 82.362 37.597 1 NaN NaN 0 36630000 0 36630000 20513 2103 7745 7923 32183 32183 LETYENAR 8 0 1 Unmodified _LETYENAR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.2436 2 498.243264 994.471974 87483.53 0.15597 7.771E-05 -0.37699 -0.00018783 -0.22103 -0.00011012 498.24327868894 503.246628327859 22.577 0.54569 22.577 22.382 22.927 0 92 32 6 0 0 0 0.0011347 1 8595 111.82 73.578 1 0.59099 0.61778 0 13147000 7549200 5597600 20514 1418 7746 7924 32184 32184 LEVAEAEEEETSIK 14 1 0 Unmodified _LEVAEAEEEETSIK_ 0 0 0 B0UZZ8;O15213;B4DNI0;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.8837 2 788.883058 1575.75156 68933.43 0.44992 0.00035493 0.14598 0.00011516 0.5959 0.00047009 788.88306671546 792.890148483086 64.668 0.76735 64.668 64.337 65.105 7.6294E-06 380 69 8 0 0 0 7.3363E-47 2 37228 184.55 154.55 1 0.89666 0.97766 0 49933000 25341000 24593000 20515 809 7747 7925 32185;32186 32185 LEVAEAEEEETSIK 14 1 0 Unmodified _LEVAEAEEEETSIK_ 0 0 0 B0UZZ8;O15213;B4DNI0;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.3849 2 788.883058 1575.75156 68022.01 0.6486 0.00051167 0.019897 1.5696E-05 0.6685 0.00052737 788.883023510672 792.890073102854 63.577 0.77491 63.577 63.21 63.985 3.8147E-06 333 67 7 0 0 0 2.0223E-14 2 37471 131.43 117.15 1 0.88675 0.9859 0 50661000 24428000 26233000 20516 809 7747 7925 32187;32188 32188 LEVAEAEEEETSIK 14 1 0 Unmodified _LEVAEAEEEETSIK_ 0 0 0 B0UZZ8;O15213;B4DNI0;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.8824 2 788.883058 1575.75156 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.966 1 63.966 63.466 64.466 0 0 0 0 0.0019366 1 37628 68.069 50.205 1 20517 809 7747 7925 32189 32189 LEVAEAEEEETSIK 14 1 0 Unmodified _LEVAEAEEEETSIK_ 0 0 0 B0UZZ8;O15213;B4DNI0;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 788.8839 2 788.883058 1575.75156 68190.75 0.6696 0.00052824 0.18003 0.00014203 0.84964 0.00067026 788.883119954119 792.890174543281 74.939 0.66574 74.939 74.641 75.307 0 262 49 7 0 0 0 0.00014511 2 39803 77.597 77.597 1 1.2505 0.98182 0 11313000 5233600 6079700 20518 809 7747 7925 32190;32191 32191 LEVAEAEEEETSIK 14 1 0 Unmodified _LEVAEAEEEETSIK_ 0 0 0 B0UZZ8;O15213;B4DNI0;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.3846 2 788.883058 1575.75156 67978.07 0.55698 0.00043939 0.20618 0.00016265 0.76316 0.00060205 788.883117982149 792.890241228311 75.399 0.60921 75.399 75.129 75.738 0 257 45 7 0 0 0 0.00017925 3 39208 72.29 72.29 1 1.2492 1.0247 0 8920800 3921300 4999600 20519 809 7747 7925 32192;32193;32194 32193 LEVAPISDIIAIK 13 1 0 Unmodified _LEVAPISDIIAIK_ 0 0 0 A0A0S2Z3L0;P13804;A0A0S2Z3M4;H0YL12;H0YKF0;H0YLU7;H0YK49;H0YNX6 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.4263 2 691.418685 1380.82282 NaN NaN NaN -0.046493 -3.2146E-05 NaN NaN NaN NaN 121.73 0.69292 121.73 121.43 122.13 0 0 0 0 8.5625E-09 1 78733 107.06 48.1 1 NaN NaN 0 42545000 0 42545000 20520 553 7748 7926 32195 32195 LEVAPISDIIAIK 13 1 0 Unmodified _LEVAPISDIIAIK_ 0 0 0 A0A0S2Z3L0;P13804;A0A0S2Z3M4;H0YL12;H0YKF0;H0YLU7;H0YK49;H0YNX6 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.4194 2 691.418685 1380.82282 73220.75 1.1072 0.00076555 -0.24653 -0.00017046 0.86068 0.00059509 691.418473672902 695.425581726442 121.25 0.56298 121.25 120.99 121.55 0 133 36 5 0 0 0 0.00682 1 80242 45.764 38.287 1 4.1274 4.6534 0 61457000 10572000 50885000 20521 553 7748 7926 32196 32196 LEVDEDFEEDNAAK 14 1 0 Unmodified _LEVDEDFEEDNAAK_ 0 0 0 A8K6G9;Q92620;B4DM30;B4DET0 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.3551 2 812.354664 1622.69478 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.067 1 66.067 65.567 66.567 7.6294E-06 0 0 0 0.0018891 1 38089 68.536 55.92 1 20522 760 7749 7927 32197 32197 LEVDEDFEEDNAAK 14 1 0 Unmodified _LEVDEDFEEDNAAK_ 0 0 0 A8K6G9;Q92620;B4DM30;B4DET0 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.3629 2 812.354664 1622.69478 74614.43 0.62753 0.00050978 -0.39219 -0.0003186 0.23534 0.00019118 812.354205819125 816.361023327201 65.218 0.25365 65.218 65.108 65.362 0 48 19 4 0 0 0 0.00022159 2 38471 66.267 66.267 1 1.0126 1.0161 0 6910100 3447000 3463100 20523 760 7749 7927 32198;32199 32199 LEVDIPLVK 9 1 0 Unmodified _LEVDIPLVK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8;H0YE22 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.3233 2 513.3157 1024.61685 86091.73 0.51255 0.0002631 0.11214 5.7563E-05 0.62469 0.00032066 513.315651636898 517.322748018883 106.72 0.53671 106.72 106.45 106.99 0 165 41 6 0 0 0 0.0070864 2 66266 62.546 41.758 1 1.9894 1.9641 0 19399000 6309000 13090000 20524 1054 7750 7928 32200;32201 32201 LEVDIPLVK 9 1 0 Unmodified _LEVDIPLVK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8;H0YE22 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.3234 2 513.3157 1024.61685 85904.48 0.69744 0.00035801 0.068295 3.5057E-05 0.76573 0.00039306 513.315685474477 517.322841407413 118.11 0.41133 118.11 117.94 118.36 -7.6294E-06 50 16 5 0 0 0 0.035569 1 69675 43.808 33.34 1 1.5786 1.3329 0 1957500 760800 1196700 20525 1054 7750 7928 32202 32202 LEVDIPLVK 9 1 0 Unmodified _LEVDIPLVK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8;H0YE22 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.3155 2 513.3157 1024.61685 87714.41 0.28555 0.00014657 0.071495 3.6699E-05 0.35704 0.00018327 513.315558756061 517.32279053049 117.9 0.37717 117.9 117.69 118.07 0 53 17 5 0 0 0 0.016119 1 68639 54.157 37.381 1 1.3944 1.1557 0 1746000 639600 1106400 20526 1054 7750 7928 32203 32203 LEVDVIQER 9 0 1 Unmodified _LEVDVIQER_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.8015 2 550.800946 1099.58734 83257.95 0.21291 0.00011727 0.48309 0.00026609 0.696 0.00038336 550.801153969676 555.805288947474 69.754 0.51982 69.754 69.465 69.985 0 165 45 6 0 0 0 0.00052528 1 40522 98.033 37.443 1 0.80746 0.83491 0 37258000 19192000 18066000 20527 1005 7751 7929 32204 32204 LEVDVIQER 9 0 1 Unmodified _LEVDVIQER_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.8011 2 550.800946 1099.58734 77840.77 0.39149 0.00021563 -1.6283 -0.00089689 -1.2369 -0.00068126 550.801270123379 555.805257879259 68.634 0.50127 68.634 68.318 68.819 0 179 42 6 0 0 0 0.0015398 1 40742 84.083 40.275 1 0.76349 0.83913 0 40627000 23800000 16827000 20528 1005 7751 7929 32205 32205 LEVDVIQER 9 0 1 Unmodified _LEVDVIQER_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.8048 2 550.800946 1099.58734 83321.08 0.34411 0.00018954 0.24414 0.00013447 0.58825 0.00032401 550.800843957433 555.805087218568 79.601 0.50735 79.601 79.315 79.822 0 137 31 6 0 0 0 0.018567 2 42895 51.949 20.128 1 0.90733 0.75853 0 3547200 1751600 1795700 20529 1005 7751 7929 32206;32207 32206 LEVDVIQER 9 0 1 Unmodified _LEVDVIQER_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.8013 2 550.800946 1099.58734 83897.31 0.40591 0.00022357 0.12559 6.9173E-05 0.53149 0.00029275 550.800877261252 555.805004573017 79.822 0.55882 79.822 79.553 80.112 0 128 34 5 0 0 0 0.019322 2 42159 51.268 18.427 1 0.99031 0.84778 0 2856400 1594100 1262300 20530 1005 7751 7929 32208;32209 32209 LEVEANNAFDQYR 13 0 1 Unmodified _LEVEANNAFDQYR_ 0 0 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.8772 2 784.870619 1567.72669 69011.12 0.81537 0.00063996 0.066109 5.1887E-05 0.88148 0.00069185 784.870583038799 789.874796169216 75.124 0.54951 75.124 74.808 75.358 0 198 43 6 0 0 0 0.00012239 2 43993 93.258 93.258 1 1.4032 1.4428 0 25218000 10178000 15040000 20531 814 7752 7930 32210;32211 32210 LEVEANNAFDQYR 13 0 1 Unmodified _LEVEANNAFDQYR_ 0 0 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.8723 2 784.870619 1567.72669 68904.47 0.66741 0.00052383 0.46528 0.00036518 1.1327 0.00088901 784.870970924238 789.875154926483 74.092 0.63329 74.092 73.816 74.449 -7.6294E-06 233 53 7 0 0 0 2.3429E-05 2 44491 108.7 108.7 1 1.4211 1.5404 0 27674000 14085000 13589000 20532 814 7752 7930 32212;32213 32213 LEVEANNAFDQYR 13 0 1 Unmodified _LEVEANNAFDQYR_ 0 0 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.3786 2 784.870619 1567.72669 69280.91 0.55001 0.00043168 0.71289 0.00055953 1.2629 0.00099121 784.870884582468 789.875255715967 86.063 0.3949 86.063 85.809 86.204 0 87 25 6 0 0 0 0.013343 1 47085 51.252 51.252 1 2.3899 2.0907 0 1858400 723090 1135300 20533 814 7752 7930 32214 32214 LEVEANNAFDQYR 13 0 1 Unmodified _LEVEANNAFDQYR_ 0 0 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.871 2 784.870619 1567.72669 71849.74 0.6335 0.00049722 -0.096682 -7.5883E-05 0.53682 0.00042134 785.372050602573 789.874320467968 86.262 0.41873 86.262 86.026 86.445 0 80 20 7 0 0 0 0.052417 1 46479 38.875 38.875 1 2.1107 1.8365 0 1537700 564650 973040 20534 814 7752 7930 32215 32215 LEVFTTPK 8 1 0 Unmodified _LEVFTTPK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.7739 2 467.765843 933.517133 85534.59 0.24253 0.00011345 -0.97842 -0.00045767 -0.73588 -0.00034422 467.765310727825 471.772648497237 63.573 0.94386 63.573 63.169 64.113 0 310 92 5 0 0 0 0.0091076 1 36531 75.738 28.295 1 1.6676 1.7918 0 39756000 15636000 24120000 20535 1945 7753 7931 32216 32216 LEVGPR 6 0 1 Unmodified _LEVGPR_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 335.6986 2 335.697764 669.380974 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.748 1 25.748 25.248 26.248 0 0 0 0 0.049788 1 11323 74.597 20.06 1 20536 1454 7754 7932 32217 32217 LEVKPHALELPDK 13 2 0 Unmodified _LEVKPHALELPDK_ 0 0 1 A0A024RD36;Q6DKI1;R4GMU7;B7Z4G0 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.2957 3 496.952203 1487.83478 86672.17 0.30491 0.00015152 0.25763 0.00012803 0.56253 0.00027955 497.286981434928 502.295038796787 67.136 0.64865 67.136 66.873 67.522 0 195 48 7 0 0 0 0.00046235 1 34925 59.607 39.598 1 1.1245 0.97011 0 5225900 2597900 2628100 20537 378 7755 7933 32218 32218 LEVNLQAMK 9 1 0 Oxidation (M) _LEVNLQAM(ox)K_ LEVNLQAM(1)K LEVNLQAM(91.9)K 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.2952 2 531.286617 1060.55868 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.137 1 49.137 48.637 49.637 0 0 0 0 0.00073205 1 27611 91.9 37.695 1 20538 81 7756 7934 32219 32219 62 LEVQAEEERK 10 1 1 Unmodified _LEVQAEEERK_ 0 0 1 Q9H307;A8K964 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 410.8819 3 410.882337 1229.62518 94105.95 -0.054847 -2.2536E-05 -0.069445 -2.8534E-05 -0.12429 -5.1069E-05 410.882347047653 416.889791199956 20.583 0.36 20.583 20.432 20.792 0 73 14 9 0 0 0 0.0003158 2 6989 63.624 54.192 1 1.3657 1.5711 0 27332000 11646000 15686000 20539 2028 7757 7935 32220;32221 32221 LEVQAEEERK 10 1 1 Unmodified _LEVQAEEERK_ 0 0 1 Q9H307;A8K964 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.8196 2 615.819867 1229.62518 77636.05 0.35504 0.00021864 -0.64739 -0.00039867 -0.29235 -0.00018003 615.819587496756 624.830738060995 20.597 0.27592 20.597 20.432 20.708 0 42 12 6 0 0 0 0.001172 1 7032 82.645 54.436 1 1.1 1.2201 0 19258000 9064200 10194000 20540 2028 7757 7935 32222 32222 LEVQAEEERK 10 1 1 Unmodified _LEVQAEEERK_ 0 0 1 Q9H307;A8K964 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.8901 3 410.882337 1229.62518 93109.97 0.22538 9.2603E-05 0.058853 2.4182E-05 0.28423 0.00011678 410.882353792653 416.889846559121 20.464 0.31512 20.464 20.35 20.665 0 39 9 7 0 0 0 0.00080993 2 6790 66.321 54.966 1 1.2722 1.4773 0 37895000 13705000 24191000 20541 2028 7757 7935 32223;32224 32224 LEVQAEEERK 10 1 1 Unmodified _LEVQAEEERK_ 0 0 1 Q9H307;A8K964 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.8199 2 615.819867 1229.62518 77411.73 0.49361 0.00030397 -0.35975 -0.00022154 0.13386 8.2433E-05 615.81914832767 624.831115280149 20.461 0.21853 20.461 20.35 20.569 1.9073E-06 24 6 6 0 0 0 0.0041721 1 6797 68.846 36.006 1 1.2772 1.4549 0 19568000 8526700 11041000 20542 2028 7757 7935 32225 32225 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 1 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.3585 2 716.357345 1430.70014 71213.99 0.32458 0.00023251 0.22547 0.00016152 0.55005 0.00039403 716.357504875683 725.368719727852 20.278 0.59904 20.278 20.108 20.708 0 127 24 11 0 0 0 5.9671E-88 2 6675 258.48 160.44 1 1.0641 1.2904 0 304750000 147900000 156850000 20543 1470 7758 7936 32226;32227 32226 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 1 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.9071 3 477.907322 1430.70014 85829.02 -0.23976 -0.00011458 -0.055373 -2.6463E-05 -0.29513 -0.00014105 477.907747071497 483.91454538489 20.262 0.97042 20.262 20.043 21.014 0 170 39 11 0 0 0 8.697E-14 2 6681 136.7 100.92 1 0.95952 1.1698 0 696760000 346660000 350110000 20544 1470 7758 7936 32228;32229 32228 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 1 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.3574 2 716.357345 1430.70014 70932.64 0.51231 0.000367 0.057087 4.0895E-05 0.5694 0.00040789 716.357570427383 725.368559874854 20.179 0.64755 20.179 20.018 20.665 0 130 21 12 0 0 0 1.1488E-120 2 6444 273.8 203.03 1 1.0778 1.284 0 562810000 270140000 292670000 20545 1470 7758 7936 32230;32231 32231 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 1 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.9072 3 477.907322 1430.70014 86138.08 0.017256 8.2467E-06 -0.4695 -0.00022438 -0.45224 -0.00021613 477.907666549914 483.914365940249 20.166 0.76735 20.166 19.954 20.721 0 170 26 12 0 0 0 6.3569E-13 2 6439 128.85 101.17 1 1.0189 1.2164 0 785030000 383860000 401160000 20546 1470 7758 7936 32232;32233 32232 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 1 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.369 2 716.357345 1430.70014 71155.23 0.33375 0.00023908 0.138 9.8855E-05 0.47175 0.00033794 716.357638258876 725.368662393964 21.904 0.70161 21.904 21.711 22.413 0 167 26 12 0 0 0 6.1806E-37 2 6765 197.07 177.41 1 1.3985 1.2601 0 114000000 47369000 66631000 20547 1470 7758 7936 32234;32235 32234 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 1 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.2422 3 477.907322 1430.70014 86055.27 -0.16323 -7.801E-05 -0.063561 -3.0376E-05 -0.22679 -0.00010839 477.907715009255 483.914481909733 21.891 1.1033 21.891 21.591 22.694 1.9073E-06 242 42 13 0 0 0 0.00041622 1 6797 64.121 56.589 1 1.2752 1.1561 0 155640000 67376000 88268000 20548 1470 7758 7936 32236 32236 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 1 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.2421 3 477.907322 1430.70014 85894.51 -0.078844 -3.768E-05 -0.16906 -8.0796E-05 -0.24791 -0.00011848 477.907720360501 483.914349247566 21.815 1.329 21.815 21.446 22.775 0 236 52 12 0 0 0 1.1083E-05 2 6264 101.53 75 1 1.2512 1.0711 0 126530000 55609000 70917000 20549 1470 7758 7936 32237;32238 32237 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 1 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.3689 2 716.357345 1430.70014 70607.03 0.25677 0.00018394 0.040848 2.9262E-05 0.29762 0.0002132 716.357603687498 725.368595228391 21.815 0.64841 21.815 21.648 22.296 -1.9073E-06 152 24 11 0 0 0 3.9197E-29 2 6284 195.25 195.25 1 1.4759 1.2616 0 93469000 37853000 55617000 20550 1470 7758 7936 32239;32240 32240 LEVSELATVK 10 1 0 Unmodified _LEVSELATVK_ 0 0 0 A4LAA3;P46100;B4DHH8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.8134 2 544.813522 1087.61249 82199.61 0.74085 0.00040362 0.12673 6.9044E-05 0.86758 0.00047267 544.813252784781 548.820533961218 76.417 0.77698 76.417 76.131 76.908 0 199 64 5 0 0 0 0.0054754 1 45134 60.102 21.927 1 0.60336 0.59396 0 24075000 16120000 7955700 20551 672 7759 7937 32241 32241 LEVSMVK 7 1 0 Oxidation (M) _LEVSM(ox)VK_ LEVSM(1)VK LEVSM(58.98)VK 0 1 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.2334 2 411.225497 820.43644 95608.45 0.38645 0.00015892 0.24099 9.9102E-05 0.62744 0.00025802 411.225332645508 415.232736780145 28.451 0.44249 28.451 28.149 28.591 0 88 29 5 0 0 0 0.020103 2 13633 58.981 21.336 1 0.9175 1.0133 0 44449000 22554000 21896000 20552 1789 7760 7938 32242;32243 32243 1654 LEVSMVKPTPGLTPR 15 1 1 Oxidation (M) _LEVSM(ox)VKPTPGLTPR_ LEVSM(1)VKPTPGLTPR LEVSM(80.53)VKPTPGLTPR 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.6479 3 547.639519 1639.89673 80107.28 0.50441 0.00027623 0.0080752 4.4223E-06 0.51248 0.00028065 547.973815571851 553.647130437632 61.714 0.84485 61.714 61.337 62.182 0 400 68 8 0 0 0 3.3084E-05 2 35332 80.534 67.397 1 1.3148 1.581 0 81878000 32614000 49263000 20553 1789 7761 7939 32244;32245 32245 1654 LEVSMVKPTPGLTPR 15 1 1 Oxidation (M) _LEVSM(ox)VKPTPGLTPR_ LEVSM(1)VKPTPGLTPR LEVSM(61.64)VKPTPGLTPR 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.6392 3 547.639519 1639.89673 80277.55 0.42562 0.00023309 -0.1963 -0.0001075 0.22932 0.00012559 547.639375109491 553.6469316501 62.715 0.92428 62.715 62.255 63.179 -3.8147E-06 407 87 6 0 0 0 6.1158E-05 2 36031 61.641 40.978 1 1.257 1.4988 0 49899000 21870000 28029000 20554 1789 7761 7939 32246;32247 32247 1654 LEVSMVKPTPGLTPR 15 1 1 Oxidation (M) _LEVSM(ox)VKPTPGLTPR_ LEVSM(1)VKPTPGLTPR LEVSM(49.46)VKPTPGLTPR 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.64 3 547.639519 1639.89673 81357.93 0.24013 0.00013151 0.17396 9.527E-05 0.4141 0.00022678 547.639674495364 553.647145690773 60.3 0.84431 60.3 59.804 60.648 0 260 50 8 0 0 0 0.00021018 1 35099 49.463 36.585 1 1.2946 1.5196 0 59380000 29031000 30349000 20555 1789 7761 7939 32248 32248 1654 LEVSMVKPTPGLTPR 15 1 1 Oxidation (M) _LEVSM(ox)VKPTPGLTPR_ LEVSM(1)VKPTPGLTPR LEVSM(94.73)VKPTPGLTPR 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.9744 3 547.639519 1639.89673 80213.24 0.55194 0.00030227 -0.52275 -0.00028628 0.029199 1.599E-05 547.63927561918 553.646818722583 61.271 0.62202 61.271 61 61.622 0 341 58 8 0 0 0 1.9306E-06 2 35875 94.728 73.775 1 1.2589 1.4837 0 100770000 45330000 55441000 20556 1789 7761 7939 32249;32250 32250 1654 LEVSMVKPTPGLTPR 15 1 1 Oxidation (M) _LEVSM(ox)VKPTPGLTPR_ LEVSM(1)VKPTPGLTPR LEVSM(44.6)VKPTPGLTPR 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.9736 3 547.639519 1639.89673 79706.16 0.19268 0.00010552 0.31519 0.00017261 0.50787 0.00027813 547.639641663529 553.647361171638 71.055 0.86958 71.055 70.689 71.558 0 274 57 9 0 0 0 0.00063927 1 37364 44.601 23.648 1 1.0413 0.90018 0 14264000 6996800 7267300 20557 1789 7761 7939 32251 32251 1654 LEVSMVKPTPGLTPR 15 1 1 Oxidation (M) _LEVSM(ox)VKPTPGLTPR_ LEVSM(1)VKPTPGLTPR LEVSM(55.17)VKPTPGLTPR 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.6477 3 547.639519 1639.89673 80048.15 0.33874 0.00018551 -0.4266 -0.00023362 -0.087856 -4.8113E-05 547.973639717601 553.647021932652 72.029 0.5752 72.029 71.808 72.383 0 239 44 7 0 0 0 0.000137 1 37923 55.173 34.22 1 1.0964 0.94221 0 11311000 5827600 5483500 20558 1789 7761 7939 32252 32252 1654 LEVSMVKPTPGLTPR 15 1 1 Oxidation (M) _LEVSM(ox)VKPTPGLTPR_ LEVSM(1)VKPTPGLTPR LEVSM(55.66)VKPTPGLTPR 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.6398 3 547.639519 1639.89673 81288.96 0.016147 8.8427E-06 0.58226 0.00031887 0.59841 0.00032771 547.639786564865 553.647422350002 71.415 0.61623 71.415 71.157 71.773 7.6294E-06 234 37 10 0 0 0 0.00013135 1 36777 55.656 34.703 1 1.1139 0.94196 0 10180000 4935200 5244400 20559 1789 7761 7939 32253 32253 1654 LEVSMVKPTPGLTPR 15 1 1 Oxidation (M) _LEVSM(ox)VKPTPGLTPR_ LEVSM(1)VKPTPGLTPR LEVSM(45.33)VKPTPGLTPR 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.9737 3 547.639519 1639.89673 79266.4 0.25845 0.00014154 -0.26223 -0.00014361 -0.0037759 -2.0678E-06 547.639424170282 553.647074345323 72.36 0.54715 72.36 72.14 72.688 0 250 48 7 0 0 0 0.00057492 1 37374 45.33 24.377 1 0.98731 0.83485 0 10043000 4548700 5494700 20560 1789 7761 7939 32254 32254 1654 LEVSMVKPTPGLTPR 15 1 1 Unmodified _LEVSMVKPTPGLTPR_ 0 0 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.3152 3 542.307881 1623.90181 80797.69 0.57652 0.00031265 0.016453 8.9223E-06 0.59298 0.00032158 542.307993723072 548.315441660345 87.855 0.55454 87.855 87.65 88.204 0 183 34 8 0 0 0 0.0008833 2 48319 46.408 25.455 1 1.7647 1.5016 0 9206500 3173300 6033200 20561 1789 7761 7940 32255;32256 32255 LEVSMVKPTPGLTPR 15 1 1 Unmodified _LEVSMVKPTPGLTPR_ 0 0 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.3162 3 542.307881 1623.90181 82238.89 0.51231 0.00027783 -0.062163 -3.3712E-05 0.45014 0.00024412 542.307602407856 548.315529668387 87.761 0.49614 87.761 87.508 88.004 0 163 30 8 0 0 0 0.0010585 1 47427 45.33 24.377 1 1.7899 1.5107 0 9020700 2831000 6189700 20562 1789 7761 7940 32257 32257 LEVSSSCGPQCHK 13 1 0 Unmodified _LEVSSSCGPQCHK_ 0 0 0 B3KQQ9;O95084;E9PRR2 B3KQQ9 B3KQQ9 PRSS23 Serine protease 23 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8323 2 744.832125 1487.6497 NaN NaN NaN 0.30496 0.00022714 NaN NaN NaN NaN 20.332 0.12578 20.332 20.224 20.35 0 0 0 0 0.017292 1 6606 49.35 29.564 1 NaN NaN 0 2140300 2140300 0 20563 929 7762 7941 32258 32258 LEWLSLLSDAEK 12 1 0 Unmodified _LEWLSLLSDAEK_ 0 0 0 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8 B3KY56 B3KY56 FAM62A;ESYT1 Extended synaptotagmin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.8846 2 702.374475 1402.7344 77308.6 0.68134 0.00047856 -0.092916 -6.5262E-05 0.58842 0.00041329 702.374429894687 706.380980241163 125.13 0.38615 125.13 124.93 125.32 -7.6294E-06 58 24 4 0 0 0 0.00020433 2 81283 91.855 91.855 1 0.95122 1.0569 0 2616300 932150 1684200 20564 320 7763 7942 32259;32260 32260 LEWLSLLSDAEK 12 1 0 Unmodified _LEWLSLLSDAEK_ 0 0 0 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8 B3KY56 B3KY56 FAM62A;ESYT1 Extended synaptotagmin-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3757 2 702.374475 1402.7344 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.12 1 125.12 124.62 125.62 0 0 0 0 0.00022717 1 81320 83.862 64.075 1 20565 320 7763 7942 32261 32261 LEWLSLLSDAEK 12 1 0 Unmodified _LEWLSLLSDAEK_ 0 0 0 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8 B3KY56 B3KY56 FAM62A;ESYT1 Extended synaptotagmin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.3817 2 702.374475 1402.7344 76087.28 1.1049 0.00077603 0.010114 7.1039E-06 1.115 0.00078314 702.373988307806 706.381555512268 124.69 0.47836 124.69 124.45 124.93 0 95 31 5 0 0 0 0.00036356 2 82901 84.17 84.17 1 1.5976 1.7142 0 3809100 1325800 2483300 20566 320 7763 7942 32262;32263 32262 LFALVLTPTR 10 0 1 Unmodified _LFALVLTPTR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.8547 2 565.850242 1129.68593 80108.64 0.98076 0.00055496 0.15235 8.6206E-05 1.1331 0.00064117 565.850233452181 570.854460702991 111.76 0.79622 111.76 111.44 112.24 0 292 56 7 0 0 0 1.6847E-08 2 70504 122.52 86.121 1 1.0479 1.2065 0 147730000 72819000 74915000 20567 313 7764 7943 32264;32265 32265 LFALVLTPTR 10 0 1 Unmodified _LFALVLTPTR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.8556 2 565.850242 1129.68593 80099.89 0.70961 0.00040153 0.041524 2.3497E-05 0.75114 0.00042503 565.850163220096 570.854427331352 111.05 0.77972 111.05 110.78 111.56 -7.6294E-06 289 55 7 0 0 0 2.7092E-09 3 71473 126.41 90.017 1 1.0313 1.1998 0 61969000 28306000 33663000 20568 313 7764 7943 32266;32267;32268 32267 LFALVLTPTR 10 0 1 Unmodified _LFALVLTPTR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.8561 2 565.850242 1129.68593 79232.24 0.86773 0.000491 0.57604 0.00032595 1.4438 0.00081696 565.850379004989 570.855028400944 122.77 0.77547 122.77 122.55 123.33 7.6294E-06 174 36 8 0 0 0 2.4698E-05 2 73277 99.802 66.962 1 1.1792 0.97737 0 11127000 4837400 6290000 20569 313 7764 7943 32269;32270 32269 LFALVLTPTR 10 0 1 Unmodified _LFALVLTPTR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;B4DYP6 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.8563 2 565.850242 1129.68593 80385.89 0.83066 0.00047003 0.6178 0.00034958 1.4485 0.00081961 565.850425385197 570.854888777845 122.54 0.79955 122.54 122.3 123.1 0 176 38 8 0 0 0 2.4698E-05 2 72154 99.802 78.445 1 1.2505 1.021 0 9339000 3813100 5526000 20570 313 7764 7943 32271;32272 32271 LFCLTLHR 8 0 1 Unmodified _LFCLTLHR_ 0 0 0 E1NZA1;Q92616;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.2 3 353.863783 1058.56952 NaN NaN NaN -0.28828 -0.00010201 NaN NaN NaN NaN 75.446 0.21253 75.446 75.368 75.58 0 0 0 0 0.023388 1 44414 41.448 20.928 1 NaN NaN 0 3025600 0 3025600 20571 1205 7765 7944 32273 32273 LFCVGFTK 8 1 0 Unmodified _LFCVGFTK_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.2548 2 486.254588 970.494624 86260.77 0.36441 0.0001772 0.31178 0.0001516 0.67619 0.0003288 486.254747214065 490.261655227765 82.42 0.99628 82.42 81.887 82.883 0 376 84 6 0 0 0 0.0092293 1 49196 75.213 67.501 1 0.80714 0.92143 0 178780000 102520000 76258000 20572 742 7766 7945 32274 32274 LFCVGFTK 8 1 0 Unmodified _LFCVGFTK_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.2547 2 486.254588 970.494624 83065.25 0.49378 0.0002401 -0.36737 -0.00017864 0.12641 6.1466E-05 486.254457258398 490.26151257188 81.161 0.91075 81.161 80.771 81.682 0 412 76 9 0 0 0 0.0058868 2 49539 89.046 74.382 1 0.83839 0.95139 0 140420000 76684000 63733000 20573 742 7766 7945 32275;32276 32276 LFCVGFTK 8 1 0 Unmodified _LFCVGFTK_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 490.2617 2 486.254588 970.494624 86853.19 0.26688 0.00012977 0.29276 0.00014235 0.55964 0.00027213 486.254641386845 490.261701853699 93.731 1.3085 93.731 93.309 94.618 0 356 83 6 0 0 0 0.020081 1 52393 58.716 58.716 1 0.82609 0.65529 0 18844000 9997000 8847200 20574 742 7766 7945 32277 32277 LFCVGFTK 8 1 0 Unmodified _LFCVGFTK_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 490.2615 2 486.254588 970.494624 87221.17 0.30293 0.0001473 0.12578 6.1159E-05 0.42871 0.00020846 486.254592304576 490.261653561693 93.55 1.3441 93.55 93.141 94.485 0 327 88 7 0 0 0 0.031343 1 51401 51.346 45.403 1 0.84219 0.67665 0 17240000 9396900 7843100 20575 742 7766 7945 32278 32278 LFDFVNAK 8 1 0 Unmodified _LFDFVNAK_ 0 0 0 A0A024R4Z6;Q08945;A0A0U1RRK2 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.2654 2 477.258185 952.501818 86849.84 0.23732 0.00011327 0.23532 0.00011231 0.47265 0.00022557 477.258261708929 481.265283060986 99.447 0.50118 99.447 99.163 99.664 0 181 28 9 0 0 0 0.0031812 2 56188 97.602 91.563 1 0.93469 0.80371 0 88240000 45825000 42415000 20576 167 7767 7946 32279;32280 32280 LFDFVNAK 8 1 0 Unmodified _LFDFVNAK_ 0 0 0 A0A024R4Z6;Q08945;A0A0U1RRK2 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 477.2584 2 477.258185 952.501818 86403.09 0.30342 0.00014481 0.39235 0.00018725 0.69577 0.00033206 477.258352389832 481.265360701594 99.261 0.40192 99.261 99.032 99.434 0 179 24 9 0 0 0 0.016045 2 55220 61.357 61.357 1 0.90311 0.76854 0 82454000 42692000 39762000 20577 167 7767 7946 32281;32282 32282 LFDHPESPTPNPTEPLFLAQAEVYK 25 1 0 Unmodified _LFDHPESPTPNPTEPLFLAQAEVYK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 947.8116 3 947.47623 2839.40686 63512.15 0.84067 0.00079651 -0.055791 -5.286E-05 0.78488 0.00074365 947.81015824522 950.816248709163 116.42 0.53422 116.42 116.19 116.73 0 254 36 10 0 0 0 9.7879E-13 3 74368 72.805 72.805 1 1.4987 1.5892 0 31419000 10441000 20979000 20578 587 7768 7947 32283;32284;32285 32284 LFDHPESPTPNPTEPLFLAQAEVYK 25 1 0 Unmodified _LFDHPESPTPNPTEPLFLAQAEVYK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 950.484 3 947.47623 2839.40686 63840.78 0.93109 0.00088219 -0.23033 -0.00021823 0.70076 0.00066396 947.810646716546 950.481705972495 115.81 0.63754 115.81 115.55 116.19 7.6294E-06 277 41 11 0 0 0 0.033015 1 75783 14.239 14.239 1 1.3463 1.4527 0 38175000 14711000 23464000 20579 587 7768 7947 32286 32286 LFDHPESPTPNPTEPLFLAQAEVYK 25 1 0 Unmodified _LFDHPESPTPNPTEPLFLAQAEVYK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 947.8109 3 947.47623 2839.40686 61377.67 0.67411 0.00063871 0.17696 0.00016767 0.85107 0.00080637 947.810503042185 950.482262242759 127.58 0.56013 127.58 127.37 127.93 0 138 21 9 0 0 0 5.6838E-06 2 76862 39.067 39.067 1 0.82851 0.66225 0 8970300 4820400 4149900 20580 587 7768 7947 32287;32288 32288 LFDHPESPTPNPTEPLFLAQAEVYK 25 1 0 Unmodified _LFDHPESPTPNPTEPLFLAQAEVYK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 950.817 3 947.47623 2839.40686 62638.57 0.62293 0.00059021 -0.20931 -0.00019832 0.41362 0.00039189 947.810283813273 950.482016573445 127.39 0.5481 127.39 127.16 127.71 0 158 22 10 0 0 0 5.653E-06 2 75828 39.124 39.124 1 0.85978 0.70729 0 10175000 5017200 5157600 20581 587 7768 7947 32289;32290 32290 LFDIFSQQVATVIQSR 16 0 1 Unmodified _LFDIFSQQVATVIQSR_ 0 0 0 Q96QK1;Q5HYM2;Q53FR4 Q96QK1 Q96QK1 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.5084 2 926.5018 1850.98905 NaN NaN NaN 1.1168 0.0010347 NaN NaN NaN NaN 128.1 0.28615 128.1 127.94 128.22 0 0 0 0 0.0068296 1 83505 51.726 40.82 1 NaN NaN 0 2767000 0 2767000 20582 1985 7769 7948 32291 32291 LFDIRPIWSR 10 0 2 Unmodified _LFDIRPIWSR_ 0 0 1 Q9Y5Q8;Q5T7U0;Q5T7U4;B7Z1V3;H7BY84 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.5888 3 434.915423 1301.72444 95476.09 0.3389 0.00014739 -0.24106 -0.00010484 0.097835 4.255E-05 435.249556594029 441.587621398341 104.53 0.30261 104.53 104.37 104.67 7.6294E-06 64 23 4 0 0 0 0.031614 1 66249 33.875 33.875 1 1.1201 1.1002 0 4491000 2250000 2241000 20583 2149 7770 7949 32292 32292 LFDLLNK 7 1 0 Unmodified _LFDLLNK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 431.7551 2 431.755278 861.496004 91682.91 0.086613 3.7395E-05 -0.025319 -1.0931E-05 0.061294 2.6464E-05 431.755132418314 435.762320271612 92.382 0.98164 92.382 91.825 92.807 0 255 93 5 0 0 0 0.010079 1 55903 118.69 32.174 1 0.90085 0.99212 0 55339000 29829000 25510000 20584 626 7771 7950 32293 32293 LFDLLNK 7 1 0 Unmodified _LFDLLNK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 431.7549 2 431.755278 861.496004 92662.45 0.10254 4.4273E-05 0.1488 6.4247E-05 0.25135 0.00010852 431.75525889539 435.762343754837 91.508 0.95596 91.508 90.888 91.844 0 323 83 6 0 0 0 0.014183 2 56504 100.74 31.31 1 0.97501 1.0978 0 57606000 25876000 31730000 20585 626 7771 7950 32294;32295 32294 LFDQAFGLPR 10 0 1 Unmodified _LFDQAFGLPR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.3135 2 582.314023 1162.61349 78785.13 0.70892 0.00041281 0.17166 9.996E-05 0.88058 0.00051277 582.31409415879 587.31811277512 103.2 1.644 103.2 102.82 104.47 0 817 136 10 0 0 0 1.0391E-09 4 63435 133.55 117.67 1 1.3447 1.5919 0 367680000 151080000 216600000 20586 1443 7772 7951 32296;32297;32298;32299 32296 LFDQAFGLPR 10 0 1 Unmodified _LFDQAFGLPR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.3143 2 582.314023 1162.61349 NaN NaN NaN -0.09804 -5.709E-05 NaN NaN NaN NaN 104.55 0.28802 104.55 104.43 104.72 0 0 0 0 0.0042823 1 64572 73.26 55.225 1 NaN NaN 0 1758000 1758000 0 20587 1443 7772 7951 32300 32300 LFDQAFGLPR 10 0 1 Unmodified _LFDQAFGLPR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.3184 2 582.314023 1162.61349 NaN NaN NaN -0.058784 -3.4231E-05 NaN NaN NaN NaN 104.8 0.12273 104.8 104.72 104.84 0 0 0 0 0.0097758 1 64768 63.565 45.125 1 NaN NaN 0 3363100 0 3363100 20588 1443 7772 7951 32301 32301 LFDQAFGLPR 10 0 1 Unmodified _LFDQAFGLPR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.3189 2 582.314023 1162.61349 79389.05 1.0046 0.00058501 -0.098327 -5.7257E-05 0.9063 0.00052775 582.313910151585 587.31798960452 102.71 1.7757 102.71 102.09 103.87 -7.6294E-06 797 144 10 0 0 0 1.0498E-06 4 65305 111.95 92.853 1 1.3881 1.6162 0 431100000 196180000 234910000 20589 1443 7772 7951 32302;32303;32304;32305 32305 LFDQAFGLPR 10 0 1 Unmodified _LFDQAFGLPR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.3186 2 582.314023 1162.61349 79818.29 0.56309 0.0003279 -0.21661 -0.00012614 0.34648 0.00020176 582.313649225624 587.318115814899 103.89 0.52824 103.89 103.77 104.29 0 82 45 4 0 0 0 0.0007117 1 65900 82.452 67.786 1 1.3457 1.3575 0 6079400 3046800 3032600 20590 1443 7772 7951 32306 32306 LFDQAFGLPR 10 0 1 Unmodified _LFDQAFGLPR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.3145 2 582.314023 1162.61349 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.36 1 104.36 103.86 104.86 0 0 0 0 0.024216 1 66111 52.482 31.962 1 20591 1443 7772 7951 32307 32307 LFDQAFGLPR 10 0 1 Unmodified _LFDQAFGLPR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.3148 2 582.314023 1162.61349 79075.62 0.76625 0.0004462 0.17147 9.9847E-05 0.93772 0.00054605 582.314100734786 587.318121603279 114.84 1.5211 114.84 114.57 116.09 0 309 69 8 0 0 0 6.8751E-06 4 67101 107.57 95.981 1 1.1785 1.0033 0 35499000 15314000 20186000 20592 1443 7772 7951 32308;32309;32310;32311 32309 LFDQAFGLPR 10 0 1 Unmodified _LFDQAFGLPR_ 0 0 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.3177 2 582.314023 1162.61349 78757.92 0.60407 0.00035176 0.10878 6.3344E-05 0.71285 0.0004151 582.314065388251 587.318094930107 114.7 1.2405 114.7 114.42 115.66 7.6294E-06 282 57 9 0 0 0 0.00030272 3 66039 90.709 77.331 1 1.2412 1.0827 0 34835000 14418000 20417000 20593 1443 7772 7951 32312;32313;32314 32312 LFDQPGDPLK 10 1 0 Unmodified _LFDQPGDPLK_ 0 0 0 Q96EY7;B2RDU4 Q96EY7 Q96EY7 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.3067 2 565.298039 1128.58152 NaN NaN NaN -0.63518 -0.00035907 NaN NaN NaN NaN 77.901 0.43436 77.901 77.676 78.111 0 0 0 0 0.048381 1 46035 47.198 30.995 1 NaN NaN 0 2902600 0 2902600 20594 1963 7773 7952 32315 32315 LFDSICNNK 9 1 0 Unmodified _LFDSICNNK_ 0 0 0 P08754;A0A142CHG9;P63096;P04899;B3KP24;B3KX51;Q96C71;Q6AWC5;Q6LCB5 P08754 P08754 GNAI3;GNAI1;GNAI2;DKFZp686O0962;WUGSC:H_LUCA15.1 Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.7728 2 555.766049 1109.51754 82915.02 0.69037 0.00038368 -0.68417 -0.00038024 0.0061987 3.445E-06 555.765960637584 559.772961733105 51.698 0.51663 51.698 51.443 51.96 -3.8147E-06 121 43 4 0 0 0 0.031367 1 28629 45.489 35.784 1 1.4584 1.4753 0 6825800 3005700 3820100 20595 1458 7774 7953 32316 32316 LFDVCGSQDFESDLDR 16 0 1 Unmodified _LFDVCGSQDFESDLDR_ 0 0 0 Q92878;E7EN38;Q32P42 Q92878 Q92878 RAD50 DNA repair protein RAD50 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 951.9116 2 951.912355 1901.81016 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.92 1 102.92 102.42 103.42 0 0 0 0 0.013513 1 63427 44.299 38.693 1 20596 1953 7775 7954 32317 32317 LFEAEAQDLFR 11 0 1 Unmodified _LFEAEAQDLFR_ 0 0 0 A8K9B9;A0A024R9N6;Q9H223 A8K9B9 A8K9B9 EHD4 EH domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.351 2 669.838059 1337.66157 77951.25 0.76315 0.00051119 0.79339 0.00053144 1.5565 0.0010426 669.838269633199 674.842208411472 105.18 0.65622 105.18 104.83 105.49 -7.6294E-06 114 51 4 0 0 0 0.0017197 2 64985 65.347 56.883 1 1.6369 1.6243 0 8333400 3253800 5079600 20597 284 7776 7955 32318;32319 32318 LFEDDDSNEK 10 1 0 Unmodified _LFEDDDSNEK_ 0 0 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.2637 2 606.256765 1210.49898 NaN NaN NaN 0.86741 0.00052587 NaN NaN NaN NaN 29.195 0.17566 29.195 29.086 29.262 -1.9073E-06 0 0 0 0.016555 1 14099 56.563 47.7 1 NaN NaN 0 3623400 0 3623400 20598 1388 7777 7956 32320 32320 LFEDMGLFEAFK 12 1 0 Oxidation (M) _LFEDM(ox)GLFEAFK_ LFEDM(1)GLFEAFK LFEDM(73.07)GLFEAFK 0 1 0 Q14432 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.8601 2 731.849778 1461.685 NaN NaN NaN 0.66633 0.00048765 NaN NaN NaN NaN 118.14 0.32772 118.14 117.93 118.26 0 0 0 0 0.00058415 1 77670 73.067 56.041 1 NaN NaN 0 2126400 0 2126400 20599 1732 7778 7957 32321 32321 1566 LFEEPEDPSNR 11 0 1 Unmodified _LFEEPEDPSNR_ 0 0 0 Q56VW8;A0A140VJT0;P63151;E5RFR9;Q59GC6;Q6ZP32;Q9Y2T4 Q56VW8 Q56VW8 PPP2R2A;PPP2R2C Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.8074 2 666.806956 1331.59936 73429.88 0.79651 0.00053112 -0.94919 -0.00063293 -0.15268 -0.00010181 666.806576002868 671.810197791414 48.561 0.5345 48.561 48.22 48.754 0 108 37 4 0 0 0 0.00045925 3 26405 76.827 72.287 1 1.8207 1.8896 0 13633000 4486000 9146800 20600 609 7779 7958 32322;32323;32324 32323 LFEEPEDPSNR 11 0 1 Unmodified _LFEEPEDPSNR_ 0 0 0 Q56VW8;A0A140VJT0;P63151;E5RFR9;Q59GC6;Q6ZP32;Q9Y2T4 Q56VW8 Q56VW8 PPP2R2A;PPP2R2C Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.8096 2 666.806956 1331.59936 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.294 1 47.294 46.794 47.794 0 0 0 0 0.00068224 1 26246 72.643 43.916 1 20601 609 7779 7958 32325 32325 LFEESDDKEDEDADGK 16 2 0 Unmodified _LFEESDDKEDEDADGK_ 0 0 1 O43719 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.9324 3 614.590164 1840.74866 77533.66 0.16936 0.00010409 0.075573 4.6446E-05 0.24493 0.00015053 614.590601111303 619.933034425129 27.339 0.21699 27.339 27.205 27.422 0 43 11 6 0 0 0 0.00011599 1 12647 57.499 57.358 1 1.7383 1.9865 0 15266000 5277700 9988600 20602 1388 7780 7959 32326 32326 LFEESDDKEDEDADGK 16 2 0 Unmodified _LFEESDDKEDEDADGK_ 0 0 1 O43719 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.3964 2 921.381608 1840.74866 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.322 1 27.322 26.822 27.822 0 0 0 0 0.003248 1 12625 64.121 41.588 1 20603 1388 7780 7959 32327 32327 LFEFAGYDVLR 11 0 1 Unmodified _LFEFAGYDVLR_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.3446 2 665.34552 1328.67649 75539.55 0.99203 0.00066004 -0.54997 -0.00036592 0.44206 0.00029412 665.345234868722 670.349450186531 117.21 0.61726 117.21 116.94 117.56 0 199 44 6 0 0 0 0.00038376 1 74928 82.749 40.64 1 1.861 1.8838 0 17963000 6566300 11397000 20604 1609 7781 7960 32328 32328 LFEFAGYDVLR 11 0 1 Unmodified _LFEFAGYDVLR_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.3504 2 665.34552 1328.67649 75319.08 0.5926 0.00039428 -0.43523 -0.00028958 0.15737 0.0001047 665.345089439254 670.349547018823 116.67 0.72046 116.67 116.37 117.1 0 171 44 6 0 0 0 0.00019291 2 76516 93.111 61.738 1 1.6867 1.6916 0 18977000 7604800 11372000 20605 1609 7781 7960 32329;32330 32330 LFEFAGYDVLR 11 0 1 Unmodified _LFEFAGYDVLR_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.8484 2 665.34552 1328.67649 74191.02 0.98151 0.00065304 0.19048 0.00012673 1.172 0.00077977 665.345426703036 670.349540875601 128.7 0.74055 128.7 128.4 129.14 0 109 33 5 0 0 0 0.0014891 2 77741 67.113 42.219 1 1.1832 1.0019 0 2946000 1521100 1424900 20606 1609 7781 7960 32331;32332 32332 LFEGNALLR 9 0 1 Unmodified _LFEGNALLR_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.7955 2 516.795466 1031.57638 83518.27 0.64987 0.00033585 0.1247 6.4444E-05 0.77457 0.00040029 516.795571514423 521.799568118121 82.976 1.4469 82.976 82.55 83.996 0 691 121 9 0 0 0 0.00026424 4 49993 104.21 54.85 1 0.92689 1.1007 0 869130000 463210000 405920000 20607 157 7782 7961 32333;32334;32335;32336 32336 LFEGNALLR 9 0 1 Unmodified _LFEGNALLR_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.796 2 516.795466 1031.57638 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.598 1 84.598 84.098 85.098 -7.6294E-06 0 0 0 0.008577 1 50727 65.038 30.23 1 20608 157 7782 7961 32337 32337 LFEGNALLR 9 0 1 Unmodified _LFEGNALLR_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.7956 2 516.795466 1031.57638 83536.17 0.56841 0.00029375 -0.14219 -7.3486E-05 0.42621 0.00022027 516.795495664037 521.799417361339 81.888 1.8934 81.888 81.449 83.342 0 728 157 9 0 0 0 2.156E-05 4 49913 116.88 59.325 1 0.89293 1.0549 0 1393100000 729930000 663140000 20609 157 7782 7961 32338;32339;32340;32341 32339 LFEGNALLR 9 0 1 Unmodified _LFEGNALLR_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.7957 2 516.795466 1031.57638 83665.88 0.46371 0.00023964 -0.24747 -0.00012789 0.21624 0.00011175 516.795277217085 521.799426678368 94.442 2.518 94.442 94.087 96.605 0 626 167 10 0 0 0 0.0014644 2 53183 85.064 39.346 1 0.81278 0.70116 0 78226000 41856000 36369000 20610 157 7782 7961 32342;32343 32343 LFEGNALLR 9 0 1 Unmodified _LFEGNALLR_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.7958 2 516.795466 1031.57638 83471.3 0.42282 0.00021851 -0.011743 -6.0689E-06 0.41108 0.00021244 516.795438212563 521.799508212389 94.345 2.4658 94.345 93.95 96.416 0 676 162 10 0 0 0 0.0044628 5 52293 69.198 23.48 1 0.83348 0.72733 0 67019000 36693000 30326000 20611 157 7782 7961 32344;32345;32346;32347;32348 32347 LFEHYYQELK 10 1 0 Unmodified _LFEHYYQELK_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.9026 3 457.231077 1368.6714 91448.9 0.092503 4.2295E-05 -0.098619 -4.5092E-05 -0.0061156 -2.7962E-06 457.230995903333 459.902348737782 69.488 0.71971 69.488 69.218 69.937 0 215 60 5 0 0 0 0.035872 1 41274 23.376 13.023 1 1.3553 1.3777 0 12625000 5897300 6727500 20612 1694 7783 7962 32349 32349 LFEISDIVIK 10 1 0 Unmodified _LFEISDIVIK_ 0 0 0 B7ZB32;Q9BR63;A8K666;Q9NSD9 B7ZB32 B7ZB32 FARSB Phenylalanine--tRNA ligase beta subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8549 2 588.847364 1175.68018 NaN NaN NaN -0.20158 -0.0001187 NaN NaN NaN NaN 117.49 0.47909 117.49 117.26 117.74 0 0 0 0 0.015203 1 75134 57.96 50.313 1 NaN NaN 0 2169300 0 2169300 20613 757 7784 7963 32350 32350 LFELEEQDLFR 11 0 1 Unmodified _LFELEEQDLFR_ 0 0 0 A0A024R0S6;Q9NZN4;Q8NCJ3;B4DLA1;B3KUH4 A0A024R0S6 A0A024R0S6 EHD2 EH domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.869 2 719.864274 1437.714 72606.88 1.1514 0.00082886 -0.21244 -0.00015293 0.93897 0.00067593 719.864320802024 725.370105100759 115.72 0.47998 115.72 115.53 116.01 -7.6294E-06 115 31 5 0 0 0 0.029206 1 73581 39.305 39.305 1 1.3183 1.3346 0 7664200 3640500 4023700 20614 57 7785 7964 32351 32351 LFELLEK 7 1 0 Unmodified _LFELLEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2631 2 446.262936 890.51132 91262.05 0.19718 8.7992E-05 0.21043 9.3908E-05 0.40761 0.0001819 446.262985569797 450.269988325673 92.468 1.1804 92.468 92.126 93.306 0 496 108 6 0 0 0 0.022601 4 56064 91.906 0 1 2.6283 2.9729 0 85964000 23125000 62839000 20615 1391 7786 7965 32352;32353;32354;32355 32353 LFELLEK 7 1 0 Unmodified _LFELLEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.2695 2 446.262936 890.51132 91262.02 0.23926 0.00010677 -0.010498 -4.6849E-06 0.22876 0.00010209 446.262958374731 450.269965912552 93.359 0.87071 93.359 93.275 94.146 0 147 77 4 0 0 0 0.034246 1 56868 62.659 0 1 2.3598 2.3247 0 19608000 6245600 13363000 20616 1391 7786 7965 32356 32356 LFELLEK 7 1 0 Unmodified _LFELLEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.27 2 446.262936 890.51132 90727.63 0.30774 0.00013734 0.29697 0.00013253 0.60471 0.00026986 446.26299261308 450.270039928337 91.543 1.6402 91.543 91.159 92.799 -7.6294E-06 506 141 7 0 0 0 0.026719 5 57414 81.784 0 1 2.6332 3.0322 0 178390000 49175000 129210000 20617 1391 7786 7965 32357;32358;32359;32360;32361 32361 LFELLEK 7 1 0 Unmodified _LFELLEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 450.2698 2 446.262936 890.51132 91234.02 0.15921 7.1051E-05 0.1501 6.6985E-05 0.30932 0.00013804 446.263035159304 450.269942155753 105.27 2.1833 105.27 104.69 106.87 7.6294E-06 401 129 7 0 0 0 0.027564 1 60224 73.324 0 1 5.5346 4.3209 0 16040000 2652700 13387000 20618 1391 7786 7965 32362 32362 LFELLEK 7 1 0 Unmodified _LFELLEK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 450.2699 2 446.262936 890.51132 91253.3 0.066048 2.9475E-05 0.23559 0.00010513 0.30163 0.00013461 446.263031130931 450.270001167865 105.02 1.9061 105.02 104.47 106.37 0 372 118 7 0 0 0 0.032621 1 59256 65.252 0 1 5.7759 4.6397 0 15624000 2402000 13222000 20619 1391 7786 7965 32363 32363 LFEMGFAEQLQEIIAR 16 0 1 Oxidation (M) _LFEM(ox)GFAEQLQEIIAR_ LFEM(1)GFAEQLQEIIAR LFEM(72.29)GFAEQLQEIIAR 0 1 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.9907 2 955.987669 1909.96078 NaN NaN NaN 0.053723 5.1359E-05 NaN NaN NaN NaN 130.17 0.44301 130.17 129.99 130.43 0 0 0 0 5.8726E-05 2 84868 72.29 57.845 1 NaN NaN 0 1515400 1515400 0 20620 1933 7787 7966 32364;32365 32364 1770 LFEMGFAEQLQEIIAR 16 0 1 Oxidation (M) _LFEM(ox)GFAEQLQEIIAR_ LFEM(1)GFAEQLQEIIAR LFEM(86.91)GFAEQLQEIIAR 0 1 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.4881 2 955.987669 1909.96078 63941.77 0.5681 0.00054309 0.080991 7.7426E-05 0.64909 0.00062052 956.489581425084 961.493744828738 129.82 0.60999 129.82 129.52 130.13 0 167 41 6 0 0 0 4.9669E-06 1 86689 86.911 86.911 1 1.3925 1.3843 0 7553800 3359400 4194500 20621 1933 7787 7966 32366 32366 1770 LFEMVLGPAAYNVPLPK 17 1 0 Oxidation (M) _LFEM(ox)VLGPAAYNVPLPK_ LFEM(1)VLGPAAYNVPLPK LFEM(100.72)VLGPAAYNVPLPK 0 1 0 Q16891;B9A067;B4DQY2;B4DT20;Q05DN3 Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.0154 2 938.007873 1874.00119 63597.77 0.91042 0.00085398 0.26187 0.00024564 1.1723 0.0010996 938.509775309148 942.014995611205 121.6 0.5687 121.6 121.35 121.92 0 183 36 7 0 0 0 3.2835E-09 2 78535 100.72 100.72 1 1.2325 1.2094 0 20493000 8609200 11884000 20622 1774 7788 7967 32367;32368 32367 1645 LFEMVLGPAAYNVPLPK 17 1 0 Oxidation (M) _LFEM(ox)VLGPAAYNVPLPK_ LFEM(1)VLGPAAYNVPLPK LFEM(112.15)VLGPAAYNVPLPK 0 1 0 Q16891;B9A067;B4DQY2;B4DT20;Q05DN3 Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 942.0161 2 938.007873 1874.00119 63097.44 1.0124 0.00094959 0.3552 0.00033318 1.3676 0.0012828 938.509569874932 942.516619369268 121.21 0.57207 121.21 120.89 121.46 0 167 32 8 0 0 0 1.4874E-10 3 80184 112.15 106.11 1 1.2804 1.3698 0 23037000 10546000 12492000 20623 1774 7788 7967 32369;32370;32371 32370 1645 LFFVDTGSK 9 1 0 Unmodified _LFFVDTGSK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.2762 2 507.26875 1012.52295 88824.19 0.58278 0.00029563 0.00070342 3.5682E-07 0.58348 0.00029598 507.268554788836 511.275812004893 95.471 0.69395 95.471 95.195 95.889 0 175 49 6 0 0 0 0.010479 1 53486 59.245 21.007 1 1.3121 1.0413 0 2997600 1306500 1691200 20624 1068 7789 7968 32372 32372 LFFVDTGSK 9 1 0 Unmodified _LFFVDTGSK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.2754 2 507.26875 1012.52295 86798.34 0.31717 0.00016089 0.016893 8.5694E-06 0.33406 0.00016946 507.268684253551 511.275757500403 95.355 0.67879 95.355 95.07 95.749 -7.6294E-06 146 47 4 0 0 0 0.049868 1 52683 38.086 18.45 1 1.3488 1.087 0 2526000 1144300 1381700 20625 1068 7789 7968 32373 32373 LFGALLER 8 0 1 Unmodified _LFGALLER_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.7738 2 459.774003 917.533452 91284.49 0.47805 0.00021979 -0.19549 -8.988E-05 0.28256 0.00012991 459.773872999522 464.77786161741 92.048 1.0988 92.048 91.382 92.481 -7.6294E-06 299 97 4 0 0 0 0.012841 2 55696 73.26 20.097 1 0.78442 0.8005 0 18767000 10164000 8602600 20626 2007 7790 7969 32374;32375 32374 LFGALLER 8 0 1 Unmodified _LFGALLER_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.7744 2 459.774003 917.533452 90458.74 0.51995 0.00023906 -0.12403 -5.7027E-05 0.39592 0.00018203 459.773887015855 464.777967816334 90.903 1.0486 90.903 90.265 91.314 0 197 88 4 0 0 0 0.001654 1 56390 120.62 39.24 1 0.74392 0.80474 0 27071000 12447000 14624000 20627 2007 7790 7969 32376 32376 LFGIESSSGTILWK 14 1 0 Unmodified _LFGIESSSGTILWK_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.0482 2 769.416674 1536.81879 72527.78 0.72702 0.00055938 0.13646 0.000105 0.86349 0.00066438 769.416924207599 773.423444882241 117.5 0.41795 117.5 117.26 117.68 0 95 28 5 0 0 0 0.0080871 1 75259 39.293 29.638 1 0.60458 0.60654 0 7545000 5202100 2342900 20628 1913 7791 7970 32377 32377 LFGLLVK 7 1 0 Unmodified _LFGLLVK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;I3L0L3 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.2722 2 395.265282 788.516011 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101 1 101 100.5 101.5 0 0 0 0 0.04783 1 62006 66.994 10.483 1 20629 1096 7792 7971 32378 32378 LFGLLVK 7 1 0 Unmodified _LFGLLVK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;I3L0L3 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 395.2653 2 395.265282 788.516011 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.17 1 101.17 100.67 101.67 7.6294E-06 0 0 0 0.044589 1 62123 68.033 9.4817 1 20630 1096 7792 7971 32379 32379 LFGNILDK 8 1 0 Unmodified _LFGNILDK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2729 2 460.26601 918.517468 91085.63 0.57938 0.00026667 -0.22512 -0.00010362 0.35425 0.00016305 460.26587146626 464.272875838502 86.447 0.45131 86.447 86.246 86.697 0 130 33 6 0 0 0 0.014622 2 51993 62.582 36.388 1 0.61202 0.62342 0 28059000 17138000 10921000 20631 222 7793 7972 32380;32381 32380 LFGNILDK 8 1 0 Unmodified _LFGNILDK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2737 2 460.26601 918.517468 90126.63 0.013757 6.3319E-06 0.43613 0.00020074 0.44989 0.00020707 460.266157496578 464.27316095214 85.393 0.47517 85.393 85.202 85.677 0 132 37 6 0 0 0 0.01158 2 52470 69.598 41.794 1 0.60606 0.67331 0 50022000 32822000 17200000 20632 222 7793 7972 32382;32383 32382 LFGSAANVVSAK 12 1 0 Unmodified _LFGSAANVVSAK_ 0 0 0 A0A024RBU4;O96006 A0A024RBU4 A0A024RBU4 hCG_1981838;ZBED1 Zinc finger BED domain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.3315 2 582.324588 1162.63462 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.187 1 66.187 65.687 66.687 7.6294E-06 0 0 0 0.023479 1 39094 49.466 16.625 1 20633 347 7794 7973 32384 32384 LFHEVVQAFR 10 0 1 Unmodified _LFHEVVQAFR_ 0 0 0 Q9Y3T9;B3KNC3;B4DM71 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.8959 3 415.89614 1244.66659 94956.87 0.31571 0.0001313 -0.40421 -0.00016811 -0.088504 -3.6809E-05 415.895984861765 419.231832636763 79.522 0.91361 79.522 79.051 79.964 0 238 81 5 0 0 0 0.0011463 1 47093 63.216 63.216 1 1.0913 1.0976 0 17360000 8717800 8642200 20634 2139 7795 7974 32385 32385 LFHEVVQAFR 10 0 1 Unmodified _LFHEVVQAFR_ 0 0 0 Q9Y3T9;B3KNC3;B4DM71 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.2323 3 415.89614 1244.66659 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.451 1 79.451 78.951 79.951 0 0 0 0 0.022189 1 47128 60.518 46.709 1 20635 2139 7795 7974 32386 32386 LFHEVVQAFR 10 0 1 Unmodified _LFHEVVQAFR_ 0 0 0 Q9Y3T9;B3KNC3;B4DM71 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 419.2326 3 415.89614 1244.66659 95304.48 -0.2672 -0.00011113 0.2781 0.00011566 0.010897 4.5319E-06 415.896152758027 419.232371635409 86.279 1.0802 86.279 85.854 86.935 7.6294E-06 287 71 6 0 0 0 0.046647 1 47137 17.221 14.854 1 1.3642 1.1409 0 3817900 1607400 2210500 20636 2139 7795 7974 32387 32387 LFHEVVQAFR 10 0 1 Unmodified _LFHEVVQAFR_ 0 0 0 Q9Y3T9;B3KNC3;B4DM71 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 415.8961 3 415.89614 1244.66659 94308.27 -0.26952 -0.00011209 0.22252 9.2546E-05 -0.047003 -1.9548E-05 415.896145437773 419.232306024828 85.769 1.3526 85.769 85.403 86.755 7.6294E-06 229 79 5 0 0 0 0.028946 2 46088 30.612 30.612 1 1.1053 0.9673 0 3564100 1562300 2001800 20637 2139 7795 7974 32388;32389 32389 LFHNTPGHR 9 0 1 Unmodified _LFHNTPGHR_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 363.5251 3 360.189547 1077.54681 101888.7 0.090364 3.2548E-05 -0.37119 -0.0001337 -0.28082 -0.00010115 360.189237965174 363.52542145744 16.66 0.26407 16.66 16.536 16.8 0 37 10 5 0 0 0 0.0018786 3 3744 56.729 45.624 1 0.90877 0.95713 0 4031200 2317500 1713600 20638 582 7796 7975 32390;32391;32392 32392 LFIFETFCR 9 0 1 Unmodified _LFIFETFCR_ 0 0 0 E5RGA2;B3KW56;Q6IAX5;B2R806;P60228;E5RHS5 E5RGA2 E5RGA2 EIF3E Eukaryotic translation initiation factor 3 subunit E MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.8146 2 616.810259 1231.60597 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.89 1 115.89 115.39 116.39 0 0 0 0 0.036636 1 75711 50.878 20.308 1 20639 857 7797 7976 32393 32393 LFIGGLNTETNEK 13 1 0 Unmodified _LFIGGLNTETNEK_ 0 0 0 H0Y6E7;H3BT71;P38159;Q2VIN3;Q96E39;H3BR27;A0A1B0GUK8;H3BNC1 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.375 2 718.375006 1434.73546 71173.83 0.67823 0.00048722 0.14841 0.00010661 0.82664 0.00059384 718.374976559564 722.382541683472 81.617 1.0578 81.617 81.314 82.372 0 486 92 10 0 0 0 9.5096E-06 3 48540 100.69 86.389 1 1.3949 1.6247 0 261890000 107560000 154330000 20640 1284 7798 7977 32394;32395;32396 32395 LFIGGLNTETNEK 13 1 0 Unmodified _LFIGGLNTETNEK_ 0 0 0 H0Y6E7;H3BT71;P38159;Q2VIN3;Q96E39;H3BR27;A0A1B0GUK8;H3BNC1 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.3826 2 718.375006 1434.73546 70850.23 0.61175 0.00043947 0.36303 0.00026079 0.97478 0.00070026 718.375144708721 722.382867761821 80.668 1.1109 80.668 80.249 81.36 0 460 93 9 0 0 0 8.0557E-06 2 48970 102.52 79.994 1 1.3774 1.6142 0 319620000 139170000 180460000 20641 1284 7798 7977 32397;32398 32397 LFIGGLNTETNEK 13 1 0 Unmodified _LFIGGLNTETNEK_ 0 0 0 H0Y6E7;H3BT71;P38159;Q2VIN3;Q96E39;H3BR27;A0A1B0GUK8;H3BNC1 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.373 2 718.375006 1434.73546 NaN NaN NaN 0.3295 0.0002367 NaN NaN NaN NaN 81.367 0.12969 81.367 81.319 81.449 0 0 0 0 0.053843 1 49695 39.625 11.612 1 NaN NaN 0 4747800 4747800 0 20642 1284 7798 7977 32399 32399 LFIGGLNTETNEK 13 1 0 Unmodified _LFIGGLNTETNEK_ 0 0 0 H0Y6E7;H3BT71;P38159;Q2VIN3;Q96E39;H3BR27;A0A1B0GUK8;H3BNC1 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.3824 2 718.375006 1434.73546 69640.55 0.7309 0.00052506 -0.21576 -0.000155 0.51514 0.00037006 718.375105985141 722.382120831237 93.246 1.0905 93.246 92.895 93.986 0 398 72 9 0 0 0 0.000141 3 51966 89.171 89.171 1 0.73125 0.59515 0 30922000 17054000 13868000 20643 1284 7798 7977 32400;32401;32402 32401 LFIGGLNTETNEK 13 1 0 Unmodified _LFIGGLNTETNEK_ 0 0 0 H0Y6E7;H3BT71;P38159;Q2VIN3;Q96E39;H3BR27;A0A1B0GUK8;H3BNC1 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.3753 2 718.375006 1434.73546 69084.03 0.53746 0.0003861 -0.33371 -0.00023973 0.20375 0.00014637 718.37502857936 722.382054426545 93.13 1.1099 93.13 92.809 93.919 0 380 72 9 0 0 0 1.1371E-08 3 51019 113.69 113.69 1 0.77393 0.6355 0 27703000 15495000 12209000 20644 1284 7798 7977 32403;32404;32405 32404 LFIGGLNVQTSESGLR 16 0 1 Unmodified _LFIGGLNVQTSESGLR_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.9648 2 845.959768 1689.90498 67067.65 0.85918 0.00072683 0.31985 0.00027058 1.179 0.00099741 845.959793149834 850.964207032964 107.1 0.86893 107.1 106.74 107.61 0 404 66 10 0 0 0 2.1251E-68 3 66551 197.3 197.3 1 1.0055 1.1551 0 140820000 70303000 70514000 20645 1706 7799 7978 32406;32407;32408 32406 LFIGGLNVQTSESGLR 16 0 1 Unmodified _LFIGGLNVQTSESGLR_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.9641 2 845.959768 1689.90498 66052.43 0.96941 0.00082009 0.53241 0.0004504 1.5018 0.0012705 845.960834212153 850.963980296747 106.45 1.5393 106.45 105.51 107.05 0 458 116 9 0 0 0 9.2719E-69 2 67706 199.43 199.43 1 0.99314 1.1408 0 193250000 94848000 98398000 20646 1706 7799 7978 32409;32410 32409 LFIGGLNVQTSESGLR 16 0 1 Unmodified _LFIGGLNVQTSESGLR_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 845.9602 2 845.959768 1689.90498 66354.95 0.84933 0.0007185 0.13526 0.00011443 0.98459 0.00083293 845.959862574312 850.964004783419 118.57 0.62029 118.57 118.21 118.83 0 174 29 9 0 0 0 5.531E-13 2 69976 124.21 124.21 1 0.68575 0.58961 0 45691000 27412000 18279000 20647 1706 7799 7978 32411;32412 32412 LFIGGLNVQTSESGLR 16 0 1 Unmodified _LFIGGLNVQTSESGLR_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.9603 2 845.959768 1689.90498 67007.55 0.68966 0.00058342 0.28526 0.00024132 0.97492 0.00082474 845.959966125184 850.964166730938 118.31 0.71329 118.31 118 118.71 -7.6294E-06 200 34 9 0 0 0 1.5102E-24 2 68940 140.14 140.14 1 0.72627 0.63352 0 31049000 18913000 12136000 20648 1706 7799 7978 32413;32414 32414 LFIGGLPNYLNDDQVK 16 1 0 Unmodified _LFIGGLPNYLNDDQVK_ 0 0 0 K7ENG2;B5BU25;P26368 K7ENG2 K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.4832 2 903.475251 1804.93595 65442.09 0.80522 0.0007275 0.67936 0.00061378 1.4846 0.0013413 903.475924623184 907.483032084849 116.63 0.38332 116.63 116.44 116.82 7.6294E-06 86 25 5 0 0 0 7.0498E-05 2 74471 81.92 81.92 1 1.1497 1.1686 0 13816000 6843600 6972100 20649 1074 7800 7979 32415;32416 32415 LFIGGLPNYLNDDQVK 16 1 0 Unmodified _LFIGGLPNYLNDDQVK_ 0 0 0 K7ENG2;B5BU25;P26368 K7ENG2 K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.977 2 903.475251 1804.93595 63449.25 0.59051 0.00053352 0.96114 0.00086837 1.5517 0.0014019 903.47621249805 907.482978591135 116.08 0.4445 116.08 115.9 116.34 0 102 28 5 0 0 0 0.00015361 1 75908 68.44 55.88 1 1.2033 1.2117 0 16129000 6947100 9181900 20650 1074 7800 7979 32417 32417 LFIGGLSFETTDDSLR 16 0 1 Unmodified _LFIGGLSFETTDDSLR_ 0 0 0 P51991;B4E3E6;B4DDB6;Q65ZQ3 P51991 P51991 HNRNPA3;HNRPA3;D10S102 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 890.9539 2 885.949066 1769.88358 64329.3 0.83622 0.00074085 -0.86407 -0.00076552 -0.027846 -2.467E-05 886.450425335213 890.953622773995 119.61 0.69124 119.61 119.21 119.9 0 246 46 9 0 0 0 5.2425E-12 2 76960 114.82 94.039 1 1.37 1.4014 0 35057000 15075000 19983000 20651 1598 7801 7980 32418;32419 32418 LFIGGLSFETTDESLR 16 0 1 Unmodified _LFIGGLSFETTDESLR_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VTQ5;B4DP35;F8W646;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 898.468 2 892.956891 1783.89923 63472.16 1.224 0.0010929 0.65721 0.00058686 1.8812 0.0016798 892.957015610482 897.961569868278 118.97 1.2824 118.97 118.55 119.83 0 350 80 11 0 0 0 1.7701E-08 2 76306 102.62 91.408 1 2.1952 2.587 0 240520000 71556000 168960000 20652 317 7802 7981 32420;32421 32421 LFIGGLSFETTDESLR 16 0 1 Unmodified _LFIGGLSFETTDESLR_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VTQ5;B4DP35;F8W646;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.9645 2 892.956891 1783.89923 63037.27 0.48324 0.00043151 0.80219 0.00071632 1.2854 0.0011478 893.458168119336 897.96181300961 118.51 0.75688 118.51 118.18 118.94 0 308 46 11 0 0 0 5.2425E-12 2 77835 114.82 114.82 1 2.2189 2.5238 0 123910000 36532000 87378000 20653 317 7802 7981 32422;32423 32423 LFIGGLSFETTDESLR 16 0 1 Unmodified _LFIGGLSFETTDESLR_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VTQ5;B4DP35;F8W646;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 897.9622 2 892.956891 1783.89923 63267.46 0.47874 0.0004275 1.0311 0.00092072 1.5098 0.0013482 892.957100472742 897.962293832237 131.04 0.76927 131.04 130.64 131.41 0 181 33 9 0 0 0 7.5637E-05 1 79400 81.494 75.652 1 1.1785 1.0019 0 34403000 15979000 18424000 20654 317 7802 7981 32424 32424 LFIGGLSFETTDESLR 16 0 1 Unmodified _LFIGGLSFETTDESLR_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VTQ5;B4DP35;F8W646;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 892.9584 2 892.956891 1783.89923 63932.64 0.5787 0.00051675 1.0553 0.00094231 1.634 0.0014591 893.459022496532 897.962101429697 130.76 0.68912 130.76 130.55 131.24 0 177 30 9 0 0 0 0.00015141 2 78327 63.473 57.866 1 1.2141 1.059 0 41142000 17444000 23698000 20655 317 7802 7981 32425;32426 32426 LFIGGLSFETTEESLR 16 0 1 Unmodified _LFIGGLSFETTEESLR_ 0 0 0 P22626;A0A087WUI2;I6L957 P22626 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.9697 2 899.964716 1797.91488 63921.78 0.92758 0.00083479 -0.082668 -7.4399E-05 0.84491 0.00076039 899.964572764862 904.968734568959 119.53 0.82316 119.53 119.24 120.06 0 340 55 10 0 0 0 5.7666E-12 2 76768 113.77 113.77 1 2.2873 2.5606 0 89223000 27823000 61400000 20656 1508 7803 7982 32427;32428 32428 LFIGGLSFETTEESLR 16 0 1 Unmodified _LFIGGLSFETTEESLR_ 0 0 0 P22626;A0A087WUI2;I6L957 P22626 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.9713 2 899.964716 1797.91488 NaN NaN NaN 0.19929 0.00017936 NaN NaN NaN NaN 119.03 0.90098 119.03 118.75 119.65 0 0 0 0 6.8097E-13 1 78244 114.72 94.514 1 NaN NaN 0 87368000 0 87368000 20657 1508 7803 7982 32429 32429 LFIGGLSFETTEESLR 16 0 1 Unmodified _LFIGGLSFETTEESLR_ 0 0 0 P22626;A0A087WUI2;I6L957 P22626 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 904.9693 2 899.964716 1797.91488 64195.2 0.61941 0.00055745 0.12473 0.00011225 0.74414 0.0006697 899.964706280448 904.968888089869 131.77 0.74886 131.77 131.53 132.27 0 200 35 9 0 0 0 6.3609E-07 2 79948 98.105 98.105 1 1.1981 0.9953 0 21241000 9506600 11735000 20658 1508 7803 7982 32430;32431 32430 LFIGGLSFETTEESLR 16 0 1 Unmodified _LFIGGLSFETTEESLR_ 0 0 0 P22626;A0A087WUI2;I6L957 P22626 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 900.4664 2 899.964716 1797.91488 64747.36 0.65655 0.00059087 1.2735 0.0011461 1.9301 0.001737 900.467396454301 904.969717766008 131.61 0.74738 131.61 131.32 132.07 0 148 29 8 0 0 0 0.00015601 2 78904 73.848 73.848 1 1.2594 1.0986 0 27961000 12884000 15077000 20659 1508 7803 7982 32432;32433 32433 LFIGNLPR 8 0 1 Unmodified _LFIGNLPR_ 0 0 0 A8K9U0;Q9BWF3;E9PB51;Q9BQ04;E9PLB0;E9PM61;D6R9K7;U3KQD5;J3QRR5 A8K9U0 A8K9U0 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.2861 2 465.281995 928.549437 89121.27 0.4905 0.00022822 -1.0088 -0.00046936 -0.51827 -0.00024114 465.281468250742 470.285952168436 86.654 0.62388 86.654 86.38 87.004 0 151 44 5 0 0 0 0.014565 1 52261 62.714 19.714 1 0.9937 1.0214 0 25319000 11008000 14311000 20660 788 7804 7983 32434 32434 LFITGGITSSSTSK 14 1 0 Unmodified _LFITGGITSSSTSK_ 0 0 0 V9HWF1;Q96M94 V9HWF1 V9HWF1 HEL-S-305;KLHL15 Kelch-like protein 15 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.8802 2 699.877382 1397.74021 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.325 1 78.325 77.825 78.825 0 0 0 0 0.010613 1 46362 51.092 31.305 1 20661 1978 7805 7984 32435 32435 LFITGGITSSSTSK 14 1 0 Unmodified _LFITGGITSSSTSK_ 0 0 0 V9HWF1;Q96M94 V9HWF1 V9HWF1 HEL-S-305;KLHL15 Kelch-like protein 15 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.8766 2 699.877382 1397.74021 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.484 1 78.484 77.984 78.984 0 0 0 0 0.048739 1 46473 40.589 11.502 1 20662 1978 7805 7984 32436 32436 LFLESSDANPVR 12 0 1 Unmodified _LFLESSDANPVR_ 0 0 0 Q9NU22;Q6ZVV6;Q5T795 Q9NU22 Q9NU22 MDN1 Midasin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3534 2 674.348791 1346.68303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.55 1 77.55 77.05 78.05 -7.6294E-06 0 0 0 0.010886 1 45821 56.563 35.661 1 20663 2071 7806 7985 32437 32437 LFLESSDANPVR 12 0 1 Unmodified _LFLESSDANPVR_ 0 0 0 Q9NU22;Q6ZVV6;Q5T795 Q9NU22 Q9NU22 MDN1 Midasin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3537 2 674.348791 1346.68303 NaN NaN NaN -2.089 -0.0014087 NaN NaN NaN NaN 76.668 0.28025 76.668 76.527 76.807 0 0 0 0 0.015754 1 46199 52.79 26.851 1 NaN NaN 0 2427800 0 2427800 20664 2071 7806 7985 32438 32438 LFLESSDANPVR 12 0 1 Unmodified _LFLESSDANPVR_ 0 0 0 Q9NU22;Q6ZVV6;Q5T795 Q9NU22 Q9NU22 MDN1 Midasin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3537 2 674.348791 1346.68303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.499 1 76.499 75.999 76.999 0 0 0 0 0.012653 1 46179 55.567 34.665 1 20665 2071 7806 7985 32439 32439 LFLIDFGLAK 10 1 0 Unmodified _LFLIDFGLAK_ 0 0 0 V9HW00;P48729;B4E1D9;Q05DL3;D6REM4;Q8N752 V9HW00 V9HW00 HEL-S-77p;CSNK1A1;CSNK1A1L Casein kinase I isoform alpha;Casein kinase I isoform alpha-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.8401 2 568.839342 1135.66413 81985.81 1.1496 0.00065391 -0.24567 -0.00013975 0.90389 0.00051417 568.839278475976 572.846147826896 127.11 0.61892 127.11 126.85 127.47 7.6294E-06 124 34 6 0 0 0 0.00085357 2 82841 80.165 50.823 1 1.2433 1.2601 0 5855200 2338900 3516300 20666 1577 7807 7986 32440;32441 32441 LFLIDFGLAK 10 1 0 Unmodified _LFLIDFGLAK_ 0 0 0 V9HW00;P48729;B4E1D9;Q05DL3;D6REM4;Q8N752 V9HW00 V9HW00 HEL-S-77p;CSNK1A1;CSNK1A1L Casein kinase I isoform alpha;Casein kinase I isoform alpha-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.84 2 568.839342 1135.66413 81875.7 0.98735 0.00056164 -0.33708 -0.00019175 0.65027 0.0003699 568.839143153724 572.846056905479 126.72 0.6538 126.72 126.38 127.04 0 173 40 6 0 0 0 1.4912E-05 2 84510 101.54 55.116 1 1.3529 1.3899 0 9501000 4474900 5026100 20667 1577 7807 7986 32442;32443 32443 LFLLPHK 7 1 0 Unmodified _LFLLPHK_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.2761 2 434.276181 866.537809 91207.2 0.0068648 2.9812E-06 0.12959 5.6277E-05 0.13645 5.9258E-05 434.276129026983 438.283225795659 68.149 2.5183 68.149 66.858 69.376 0 853 214 6 0 0 0 0.03153 3 39217 66.994 66.994 1 0.67831 0.76382 0 117110000 70681000 46427000 20668 167 7808 7987 32444;32445;32446 32445 LFLLPHK 7 1 0 Unmodified _LFLLPHK_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.276 2 434.276181 866.537809 91450.27 -0.042372 -1.8401E-05 0.083627 3.6317E-05 0.041256 1.7916E-05 434.276138432229 438.283147800113 65.207 1.266 65.207 64.712 65.978 0 476 105 8 0 0 0 0.040059 2 38248 59.641 56.513 1 0.69591 0.81668 0 338420000 202100000 136320000 20669 167 7808 7987 32447;32448 32447 LFLLPHK 7 1 0 Unmodified _LFLLPHK_ 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 434.2763 2 434.276181 866.537809 91647.14 -0.21634 -9.3952E-05 0.3492 0.00015165 0.13286 5.7697E-05 434.276240982988 438.283268879086 75.608 1.5874 75.608 75.175 76.763 0 604 113 8 0 0 0 0.03153 1 39309 66.994 66.994 1 0.95342 0.76668 0 22551000 11765000 10786000 20670 167 7808 7987 32449 32449 LFLLQQPLAPSGLTLK 16 1 0 Unmodified _LFLLQQPLAPSGLTLK_ 0 0 0 Q9UDT1;Q6NTF9 Q9UDT1 Q9UDT1 WUGSC:H_RG122E10.2a;RHBDD2 Rhomboid domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 870.0276 2 870.026923 1738.03929 68626.02 0.90755 0.00078959 0.67045 0.00058331 1.578 0.0013729 870.027057112432 874.034085219972 126.3 0.53513 126.3 126.1 126.63 -7.6294E-06 114 41 6 0 0 0 0.00060937 2 82106 48.741 48.741 1 1.3784 1.41 0 4348900 2047500 2301400 20671 1847 7809 7988 32450;32451 32451 LFLLQQPLAPSGLTLK 16 1 0 Unmodified _LFLLQQPLAPSGLTLK_ 0 0 0 Q9UDT1;Q6NTF9 Q9UDT1 Q9UDT1 WUGSC:H_RG122E10.2a;RHBDD2 Rhomboid domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.5309 2 870.026923 1738.03929 67712.39 0.8732 0.00075971 0.51159 0.0004451 1.3848 0.0012048 870.02660451101 874.535385605617 125.83 0.33832 125.83 125.69 126.03 7.6294E-06 85 20 6 0 0 0 0.0010518 1 83850 46.844 46.844 1 1.2183 1.2144 0 5700500 2557000 3143500 20672 1847 7809 7988 32452 32452 LFLNETQTQEITEDIPVK 18 1 0 Unmodified _LFLNETQTQEITEDIPVK_ 0 0 0 Q59G75;P41252;J3KR24;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1063.5591 2 1059.55188 2117.08922 59321.3 0.83625 0.00088605 -0.75075 -0.00079546 0.085497 9.0588E-05 1060.05286915441 1063.55832271876 113.32 0.40472 113.32 113.11 113.52 0 168 31 8 0 0 0 8.0786E-06 3 71594 81.431 81.431 1 1.7313 1.6985 0 22781000 8734300 14047000 20673 1561 7810 7989 32453;32454;32455 32453 LFLNETQTQEITEDIPVK 18 1 0 Unmodified _LFLNETQTQEITEDIPVK_ 0 0 0 Q59G75;P41252;J3KR24;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.0609 2 1059.55188 2117.08922 59678.21 0.59234 0.00062761 -0.46655 -0.00049433 0.12579 0.00013328 1059.55219203047 1063.5584632716 112.77 0.40147 112.77 112.6 113 7.6294E-06 133 26 8 0 0 0 7.801E-41 2 73023 162.93 153.64 1 1.7269 1.7607 0 25971000 9554600 16417000 20674 1561 7810 7989 32456;32457 32456 LFLNETQTQEITEDIPVK 18 1 0 Unmodified _LFLNETQTQEITEDIPVK_ 0 0 0 Q59G75;P41252;J3KR24;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1060.0538 2 1059.55188 2117.08922 59692.48 0.34821 0.00036895 1.0655 0.001129 1.4137 0.0014979 1060.05414460052 1064.06122447924 124.68 0.46571 124.68 124.5 124.97 0 126 20 8 0 0 0 0.00065756 1 74704 42.426 37.535 1 0.92886 0.74306 0 8777500 4605300 4172300 20675 1561 7810 7989 32458 32458 LFLNETQTQEITEDIPVK 18 1 0 Unmodified _LFLNETQTQEITEDIPVK_ 0 0 0 Q59G75;P41252;J3KR24;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1060.053 2 1059.55188 2117.08922 59769.9 0.2952 0.00031278 0.66262 0.00070208 0.95782 0.0010149 1060.0539053049 1063.55949823279 124.56 0.52055 124.56 124.35 124.87 -7.6294E-06 149 24 9 0 0 0 1.1986E-05 1 73744 78.486 78.486 1 0.83854 0.68281 0 7342900 3924300 3418600 20676 1561 7810 7989 32459 32459 LFMLLLEK 8 1 0 Oxidation (M) _LFM(ox)LLLEK_ LFM(1)LLLEK LFM(92.47)LLLEK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.8018 2 511.801371 1021.58819 NaN NaN NaN -0.039728 -2.0333E-05 NaN NaN NaN NaN 107.9 0.9769 107.9 107.55 108.52 0 0 0 0 0.0012012 2 67262 92.47 52.824 1 NaN NaN 0 13908000 13908000 0 20677 1770 7811 7990 32460;32461 32460 1637 LFMLLLEK 8 1 0 Oxidation (M) _LFM(ox)LLLEK_ LFM(1)LLLEK LFM(43.12)LLLEK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.8024 2 511.801371 1021.58819 NaN NaN NaN -0.17775 -9.0971E-05 NaN NaN NaN NaN 107.22 0.87502 107.22 106.88 107.75 0 0 0 0 0.020979 1 68757 43.124 20.632 1 NaN NaN 0 15022000 15022000 0 20678 1770 7811 7990 32462 32462 1637 LFMLLLEK 8 1 0 Oxidation (M) _LFM(ox)LLLEK_ LFM(1)LLLEK LFM(89.3)LLLEK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.8017 2 511.801371 1021.58819 NaN NaN NaN -0.10426 -5.336E-05 NaN NaN NaN NaN 119.24 0.62666 119.24 119.04 119.67 0 0 0 0 0.0015597 1 70621 89.296 34.746 1 NaN NaN 0 2608700 2608700 0 20679 1770 7811 7990 32463 32463 1637 LFMLLLEK 8 1 0 Oxidation (M) _LFM(ox)LLLEK_ LFM(1)LLLEK LFM(42.29)LLLEK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.8084 2 511.801371 1021.58819 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.23 1 119.23 118.73 119.73 -7.6294E-06 0 0 0 0.045871 1 70558 42.287 17.289 1 20680 1770 7811 7990 32464 32464 1637 LFMLLLEK 8 1 0 Oxidation (M) _LFM(ox)LLLEK_ LFM(1)LLLEK LFM(57.05)LLLEK 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.8017 2 511.801371 1021.58819 NaN NaN NaN -0.40878 -0.00020922 NaN NaN NaN NaN 119.02 0.58126 119.02 118.79 119.37 0 0 0 0 0.01047 1 69511 57.047 29.793 1 NaN NaN 0 2511000 2511000 0 20681 1770 7811 7990 32465 32465 1637 LFMLLLEK 8 1 0 Unmodified _LFMLLLEK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.8036 2 503.803914 1005.59328 NaN NaN NaN -0.15372 -7.7442E-05 NaN NaN NaN NaN 118.24 0.51637 118.24 118 118.51 7.6294E-06 0 0 0 0.025534 1 75762 61.999 37.844 1 NaN NaN 0 1244800 1244800 0 20682 1770 7811 7991 32466 32466 LFMLLLEK 8 1 0 Unmodified _LFMLLLEK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.8044 2 503.803914 1005.59328 NaN NaN NaN 0.077601 3.9096E-05 NaN NaN NaN NaN 117.65 0.49784 117.65 117.41 117.91 -7.6294E-06 0 0 0 0.028018 1 77137 60.478 24.082 1 NaN NaN 0 1761800 1761800 0 20683 1770 7811 7991 32467 32467 LFMVLWLK 8 1 0 Oxidation (M) _LFM(ox)VLWLK_ LFM(1)VLWLK LFM(60.79)VLWLK 0 1 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.3192 2 533.311906 1064.60926 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.32 1 119.32 118.82 119.82 -7.6294E-06 0 0 0 0.015776 1 76747 60.788 32.276 1 20684 1362 7812 7992 32468 32468 1029 LFMVLWLK 8 1 0 Oxidation (M) _LFM(ox)VLWLK_ LFM(1)VLWLK LFM(73.04)VLWLK 0 1 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.3188 2 533.311906 1064.60926 NaN NaN NaN -0.48528 -0.0002588 NaN NaN NaN NaN 118.79 0.47502 118.79 118.63 119.11 0 0 0 0 0.0039906 1 78136 73.039 43.466 1 NaN NaN 0 2233600 0 2233600 20685 1362 7812 7992 32469 32469 1029 LFNAIIHR 8 0 1 Unmodified _LFNAIIHR_ 0 0 0 Q15149;E9PMV1;E9PKG0 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 328.5309 3 328.531021 982.571235 107345.4 0.64304 0.00021126 -0.51404 -0.00016888 0.129 4.238E-05 328.530729713996 331.866914472007 59.444 0.19276 59.444 59.36 59.553 0 50 13 6 0 0 0 0.00089968 2 33871 98.418 72.524 1 1.324 1.4551 0 54159000 23763000 30395000 20686 1754 7813 7993 32470;32471 32471 LFNAIIHR 8 0 1 Unmodified _LFNAIIHR_ 0 0 0 Q15149;E9PMV1;E9PKG0 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 328.5308 3 328.531021 982.571235 107680.9 0.14872 4.886E-05 -0.39035 -0.00012824 -0.24163 -7.9382E-05 328.530657132458 331.867048994128 57.928 0.5817 57.928 57.676 58.257 0 140 46 5 0 0 0 0.0076103 2 33527 55.676 35.078 1 1.4411 1.4355 0 16489000 7048000 9440900 20687 1754 7813 7993 32472;32473 32473 LFNDDNTIPFIIR 13 0 1 Unmodified _LFNDDNTIPFIIR_ 0 0 0 B3KPM8;Q8N5C6 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.9218 2 789.419748 1576.82494 78208.05 0.76363 0.00060282 0.31677 0.00025007 1.0804 0.00085289 789.921442113085 794.42429525325 122.49 0.38587 122.49 122.28 122.66 0 73 28 4 0 0 0 0.00079839 2 79288 60.434 47.16 1 0.64215 0.66875 0 5233200 3324800 1908500 20688 921 7814 7994 32474;32475 32474 LFNDDNTIPFIIR 13 0 1 Unmodified _LFNDDNTIPFIIR_ 0 0 0 B3KPM8;Q8N5C6 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.4203 2 789.419748 1576.82494 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.93 1 121.93 121.43 122.43 0 0 0 0 0.0047294 1 80807 59.426 44.759 1 20689 921 7814 7994 32476 32476 LFNDDNTIPFIIR 13 0 1 Unmodified _LFNDDNTIPFIIR_ 0 0 0 B3KPM8;Q8N5C6 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 794.4235 2 789.419748 1576.82494 69920.12 1.1664 0.00092082 0.094915 7.4928E-05 1.2614 0.00099575 789.921303959811 794.424033921838 134.25 0.20175 134.25 134.14 134.34 1.5259E-05 34 10 5 0 0 0 0.0030923 1 80972 51.092 33.228 1 2.055 1.7555 0 4519900 1379400 3140500 20690 921 7814 7994 32477 32477 LFNEVQEK 8 1 0 Unmodified _LFNEVQEK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.7711 2 503.763832 1005.51311 NaN NaN NaN -0.67345 -0.00033926 NaN NaN NaN NaN 39.115 1.3596 39.115 38.716 40.075 3.8147E-06 0 0 0 3.2006E-05 1 20149 125.58 86.748 1 NaN NaN 0 155190000 0 155190000 20691 2023 7815 7995 32478 32478 LFNEVQEK 8 1 0 Unmodified _LFNEVQEK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.771 2 503.763832 1005.51311 85756.08 0.083712 4.2171E-05 0.01613 8.126E-06 0.099843 5.0297E-05 503.763758042463 507.770922140089 38.136 0.88804 38.136 37.908 38.796 0 307 73 7 0 0 0 0.0028899 1 19911 98.523 66.588 1 0.84839 0.99911 0 488350000 251530000 236830000 20692 2023 7815 7995 32479 32479 LFNEVQEK 8 1 0 Unmodified _LFNEVQEK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.771 2 503.763832 1005.51311 83907.22 0.35942 0.00018106 -0.67239 -0.00033872 -0.31296 -0.00015766 503.763430940283 507.770558702891 44.406 1.2633 44.406 44.085 45.348 0 476 90 9 0 0 0 0.0036078 2 21028 96.253 63.47 1 1.3327 1.1197 0 53468000 22192000 31276000 20693 2023 7815 7995 32480;32481 32480 LFNEVQEK 8 1 0 Unmodified _LFNEVQEK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.771 2 503.763832 1005.51311 84306.19 0.478 0.0002408 -0.6809 -0.00034301 -0.2029 -0.00010221 503.763443012769 507.770531216996 44.504 1.6461 44.504 44.135 45.781 0 511 113 8 0 0 0 0.0087415 1 20467 77.318 50.715 1 1.308 1.0914 0 42000000 17373000 24627000 20694 2023 7815 7995 32482 32482 LFNLSK 6 1 0 Unmodified _LFNLSK_ 0 0 0 Q96DV6;A2A3R6;P62753;D3DRJ5;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.2227 2 361.215789 720.417025 98691.97 0.32422 0.00011711 -1.1677 -0.00042181 -0.84353 -0.0003047 361.21521862692 365.222611841863 54.375 1.3065 54.375 54.072 55.378 0 631 120 10 0 0 0 0.037725 1 30481 109.7 14.326 1 0.85369 1.0511 0 5548100000 2917400000 2630700000 20695 649;648 7816 7996 32483 32483 LFNLSK 6 1 0 Unmodified _LFNLSK_ 0 0 0 Q96DV6;A2A3R6;P62753;D3DRJ5;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 361.2157 2 361.215789 720.417025 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.759 1 55.759 55.259 56.259 0 0 0 0 0.040488 1 31372 89.903 15.186 1 20696 649;648 7816 7996 32484 32484 LFNLSK 6 1 0 Unmodified _LFNLSK_ 0 0 0 Q96DV6;A2A3R6;P62753;D3DRJ5;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.2225 2 361.215789 720.417025 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.607 1 56.607 56.107 57.107 -3.8147E-06 0 0 0 0.036548 1 31900 79.454 10.021 1 20697 649;648 7816 7996 32485 32485 LFNLSK 6 1 0 Unmodified _LFNLSK_ 0 0 0 Q96DV6;A2A3R6;P62753;D3DRJ5;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 361.2157 2 361.215789 720.417025 97481.74 -0.15961 -5.7654E-05 -1.4457 -0.00052219 -1.6053 -0.00057985 361.215140400607 365.222533991942 53.017 2.451 53.017 52.552 55.003 0 850 217 10 0 0 0 0.035342 2 30563 111.69 24.106 1 0.88772 1.0531 0 4293500000 2286800000 2006800000 20698 649;648 7816 7996 32486;32487 32486 LFNWLSETLANAR 13 0 1 Unmodified _LFNWLSETLANAR_ 0 0 0 A0A024R363;A0A087X0F1;Q9UK61 A0A024R363;Q9UK61 A0A024R363 C3orf63;FAM208A Protein FAM208A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.9067 2 767.904265 1533.79398 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.65 1 121.65 121.15 122.15 0 0 0 0 0.0014639 1 80572 73.067 45.324 1 20699 129;2105 7817 7997 32488 32488 LFPDTPLALDANK 13 1 0 Unmodified _LFPDTPLALDANK_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;B4DFG4;B4DDF3 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.8903 2 707.882467 1413.75038 72742.99 0.85564 0.00060569 -0.24096 -0.00017057 0.61469 0.00043513 708.383814220074 711.88916280831 104.7 0.58116 104.7 104.48 105.06 0 159 48 5 0 0 0 7.5482E-05 1 64786 94.616 88.322 1 1.4057 1.4283 0 13733000 5189400 8543900 20700 220 7818 7998 32489 32489 LFPDTPLALDANK 13 1 0 Unmodified _LFPDTPLALDANK_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;B4DFG4;B4DDF3 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.8897 2 707.882467 1413.75038 71065.53 0.60297 0.00042683 -0.032256 -2.2833E-05 0.57072 0.000404 707.88229461923 711.889570920876 103.97 0.5408 103.97 103.75 104.29 7.6294E-06 190 46 6 0 0 0 0.00015608 1 65779 85.958 85.958 1 1.3513 1.3489 0 14245000 5977500 8267400 20701 220 7818 7998 32490 32490 LFPELFTAENLR 12 0 1 Unmodified _LFPELFTAENLR_ 0 0 0 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.3948 2 725.390459 1448.76637 74572.75 1.3744 0.00099695 -0.3481 -0.00025251 1.0263 0.00074445 725.390498357352 730.39391337771 118.37 0.52074 118.37 118.15 118.67 0 106 30 6 0 0 0 0.00018402 2 75961 76.228 76.228 1 0.60047 0.62085 0 6109900 3066000 3043900 20702 1822 7819 7999 32491;32492 32492 LFPELFTAENLR 12 0 1 Unmodified _LFPELFTAENLR_ 0 0 0 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3959 2 725.390459 1448.76637 73728.53 0.92 0.00066736 -0.23642 -0.0001715 0.68358 0.00049586 725.390661246956 730.393832551695 117.87 0.49765 117.87 117.63 118.13 0 121 34 5 0 0 0 0.0023958 3 77353 68.893 68.893 1 0.71635 0.72346 0 10094000 6081400 4012700 20703 1822 7819 7999 32493;32494;32495 32494 LFPELFTAENLR 12 0 1 Unmodified _LFPELFTAENLR_ 0 0 0 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.3955 2 725.390459 1448.76637 72712.3 0.76386 0.0005541 0.39565 0.000287 1.1595 0.0008411 725.390589604548 730.394590381683 130.34 0.50699 130.34 130.11 130.62 0 91 25 7 0 0 0 0.017556 2 78949 48.981 48.981 1 0.83314 0.72315 0 1932600 1119600 812990 20704 1822 7819 7999 32496;32497 32496 LFPELFTAENLR 12 0 1 Unmodified _LFPELFTAENLR_ 0 0 0 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.395 2 725.390459 1448.76637 73672.72 1.0793 0.00078294 0.081731 5.9287E-05 1.1611 0.00084222 725.390907816109 730.394542010097 130.13 1.1163 130.13 129.67 130.79 1.5259E-05 93 44 5 0 0 0 0.056356 1 77876 31.597 29.656 1 0.81999 0.73856 0 2038000 1086600 951360 20705 1822 7819 7999 32498 32498 LFPGFEIETVK 11 1 0 Unmodified _LFPGFEIETVK_ 0 0 0 B4DY32;P08243;F8WEJ5 B4DY32 B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.3567 2 640.350271 1278.68599 NaN NaN NaN 1.6802 0.0010759 NaN NaN NaN NaN 110.13 0.56845 110.13 109.92 110.49 7.6294E-06 0 0 0 0.0067134 1 69140 63.283 38.36 1 NaN NaN 0 14445000 0 14445000 20706 1051 7820 8000 32499 32499 LFPYIQK 7 1 0 Unmodified _LFPYIQK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.7731 2 454.765646 907.516739 90601.62 0.13111 5.9623E-05 0.0009953 4.5263E-07 0.1321 6.0076E-05 454.765498797972 458.77260377565 75.453 0.98555 75.453 75.061 76.046 0 405 88 7 0 0 0 0.036835 1 45331 61.123 35.565 1 0.97344 1.0972 0 67839000 34017000 33821000 20707 897 7821 8001 32500 32500 LFQCLLHR 8 0 1 Unmodified _LFQCLLHR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 366.2035 3 362.867416 1085.58042 99297.27 -0.075943 -2.7557E-05 0.071741 2.6032E-05 -0.0042024 -1.5249E-06 362.867380711933 366.203394469335 68.607 1.1497 68.607 68.179 69.329 0 372 100 6 0 0 0 0.0044828 1 39754 55.676 30.117 1 0.30445 0.33034 0 50006000 38193000 11813000 20708 1476 7822 8002 32501 32501 LFQCLLHR 8 0 1 Unmodified _LFQCLLHR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 366.203 3 362.867416 1085.58042 97389.59 0.26996 9.796E-05 0.25686 9.3208E-05 0.52683 0.00019117 362.867613810751 366.203162742572 66.391 1.3214 66.391 66.054 67.375 0 351 109 7 0 0 0 0.0032126 1 39145 65.038 33.964 1 0.28617 0.32961 0 73545000 58734000 14811000 20709 1476 7822 8002 32502 32502 LFQCLLHR 8 0 1 Unmodified _LFQCLLHR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 366.203 3 362.867416 1085.58042 99936.31 -0.082381 -2.9893E-05 0.50204 0.00018218 0.41966 0.00015228 362.867631422451 366.203396027518 77.229 1.3228 77.229 76.6 77.923 -7.6294E-06 304 88 5 0 0 0 0.049658 1 41265 19.777 16.076 1 0.28739 0.24727 0 7059400 5052400 2007000 20710 1476 7822 8002 32503 32503 LFQECCPHSTDR 12 0 1 Unmodified _LFQECCPHSTDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.3337 2 775.32975 1548.64495 69840.22 0.49546 0.00038415 -0.095929 -7.4376E-05 0.39954 0.00030977 775.329771921811 780.334078739049 25.641 0.33412 25.641 25.486 25.82 0 94 19 8 0 0 0 1.5569E-05 2 11142 105.46 98.927 1 1.881 1.9736 0 39414000 15436000 23978000 20711 102 7823 8003 32504;32505 32504 LFQECCPHSTDR 12 0 1 Unmodified _LFQECCPHSTDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.2231 3 517.222259 1548.64495 83556.18 0.23837 0.00012329 -0.14322 -7.4075E-05 0.095153 4.9215E-05 517.222526691459 520.558350022862 25.641 0.42919 25.641 25.411 25.84 1.9073E-06 145 24 9 0 0 0 1.0937E-06 2 11239 105.17 102.54 1 1.6345 1.819 0 78038000 28396000 49642000 20712 102 7823 8003 32506;32507 32506 LFQECCPHSTDR 12 0 1 Unmodified _LFQECCPHSTDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.835 2 775.32975 1548.64495 68620.84 0.4462 0.00034595 -0.41881 -0.00032472 0.027391 2.1237E-05 775.329579524428 780.333670505952 25.281 0.31339 25.281 25.128 25.441 1.9073E-06 52 11 7 0 0 0 1.5402E-37 2 10886 176.42 170.18 1 1.6047 1.7242 0 25544000 10033000 15511000 20713 102 7823 8003 32508;32509 32508 LFQECCPHSTDR 12 0 1 Unmodified _LFQECCPHSTDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.5585 3 517.222259 1548.64495 80127.95 0.22498 0.00011637 -0.28576 -0.0001478 -0.060774 -3.1434E-05 517.222581980174 520.558300814073 25.304 0.3391 25.304 25.128 25.467 0 79 12 10 0 0 0 5.6989E-23 1 10952 138.45 135.81 1 1.6192 1.8462 0 98407000 38584000 59823000 20714 102 7823 8003 32510 32510 LFQECCPHSTDR 12 0 1 Unmodified _LFQECCPHSTDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.8317 2 775.32975 1548.64495 70183.66 0.56961 0.00044163 -0.45268 -0.00035098 0.11693 9.0658E-05 775.329691934945 780.333662635987 29.031 0.32169 29.031 28.871 29.193 -1.9073E-06 134 27 7 0 0 0 0.0062634 2 11685 49.35 49.35 1 1.0357 0.8712 0 4467700 2062400 2405200 20715 102 7823 8003 32511;32512 32511 LFQECCPHSTDR 12 0 1 Unmodified _LFQECCPHSTDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.5587 3 517.222259 1548.64495 83127.02 0.21842 0.00011297 -0.25792 -0.0001334 -0.039501 -2.0431E-05 517.222201679424 520.558374539962 29.023 0.44292 29.023 28.838 29.281 0 200 36 8 0 0 0 8.2598E-05 2 11713 85.845 85.214 1 1.0239 0.84228 0 11857000 5842000 6015200 20716 102 7823 8003 32513;32514 32513 LFQECCPHSTDR 12 0 1 Unmodified _LFQECCPHSTDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.3296 2 775.32975 1548.64495 68402.23 0.29705 0.00023031 -0.21179 -0.00016421 0.085258 6.6103E-05 775.329783993641 780.334000158309 29.233 0.3749 29.233 29.032 29.407 0 129 23 8 0 0 0 0.005381 1 11300 51.092 51.092 1 1.1839 1.0462 0 4080700 1951000 2129700 20717 102 7823 8003 32515 32515 LFQECCPHSTDR 12 0 1 Unmodified _LFQECCPHSTDR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.5585 3 517.222259 1548.64495 81731.74 -0.070593 -3.6512E-05 -0.018439 -9.537E-06 -0.089031 -4.6049E-05 517.222369345171 520.558483844846 29.23 0.45199 29.23 28.993 29.445 0 170 27 8 0 0 0 0.0015263 2 11303 52.132 51.868 1 1.086 0.88362 0 9780300 4693300 5087000 20718 102 7823 8003 32516;32517 32516 LFQEDDEIPLYLK 13 1 0 Unmodified _LFQEDDEIPLYLK_ 0 0 0 Q496I0;D6RIE3;D6RGV5;H0UI06;P14406 Q496I0 Q496I0 COX7A2 Cytochrome c oxidase subunit 7A2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.9192 2 811.919246 1621.82394 69010.91 0.87237 0.0007083 -0.13711 -0.00011132 0.73526 0.00059697 811.919135395 815.926464216896 113.84 0.77916 113.84 113.58 114.36 7.6294E-06 237 55 7 0 0 0 2.806E-06 4 72015 109.16 89.549 1 0.84123 0.89223 0 31440000 14983000 16457000 20719 1202 7824 8004 32518;32519;32520;32521 32518 LFQEDDEIPLYLK 13 1 0 Unmodified _LFQEDDEIPLYLK_ 0 0 0 Q496I0;D6RIE3;D6RGV5;H0UI06;P14406 Q496I0 Q496I0 COX7A2 Cytochrome c oxidase subunit 7A2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.4206 2 811.919246 1621.82394 69390.18 0.64029 0.00051986 -0.13126 -0.00010657 0.50903 0.00041329 811.919110685359 815.92659631149 113.28 0.73991 113.28 112.95 113.69 -7.6294E-06 213 50 6 0 0 0 7.9176E-05 3 73411 100.48 93.348 1 0.85179 0.88208 0 33196000 18297000 14899000 20720 1202 7824 8004 32522;32523;32524 32522 LFQEDDEIPLYLK 13 1 0 Unmodified _LFQEDDEIPLYLK_ 0 0 0 Q496I0;D6RIE3;D6RGV5;H0UI06;P14406 Q496I0 Q496I0 COX7A2 Cytochrome c oxidase subunit 7A2, mitochondrial ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 815.9279 2 811.919246 1621.82394 NaN NaN NaN 0.7631 0.00061957 NaN NaN NaN NaN 125.01 0.79181 125.01 124.53 125.32 0 0 0 0 0.001793 1 74976 73.499 45.487 1 NaN NaN 0 2758100 0 2758100 20721 1202 7824 8004 32525 32525 LFQEDDEIPLYLK 13 1 0 Unmodified _LFQEDDEIPLYLK_ 0 0 0 Q496I0;D6RIE3;D6RGV5;H0UI06;P14406 Q496I0 Q496I0 COX7A2 Cytochrome c oxidase subunit 7A2, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 816.4286 2 811.919246 1621.82394 69607.7 0.80224 0.00065136 0.67798 0.00055046 1.4802 0.0012018 811.91957221137 815.926967601922 124.84 0.73475 124.84 124.42 125.15 7.6294E-06 162 34 8 0 0 0 0.01049 1 73962 57.203 51.358 1 1.3345 1.0883 0 5751500 2483700 3267900 20722 1202 7824 8004 32526 32526 LFQEDPEAFLLYHR 14 0 1 Unmodified _LFQEDPEAFLLYHR_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.9728 3 593.301783 1776.88352 78453.9 0.88393 0.00052444 0.16952 0.00010058 1.0534 0.00062501 593.301474416606 596.972136270977 109.01 0.74684 109.01 108.67 109.42 -7.6294E-06 286 46 10 0 0 0 0.00022442 3 68102 58.752 58.752 1 1.0841 1.1254 0 22503000 11761000 10743000 20723 1380 7825 8005 32527;32528;32529 32528 LFQEDPEAFLLYHR 14 0 1 Unmodified _LFQEDPEAFLLYHR_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3017 3 593.301783 1776.88352 78919.73 0.73999 0.00043904 0.89054 0.00052836 1.6305 0.0009674 593.302002551213 596.973273843545 108.25 0.91035 108.25 107.75 108.66 0 316 63 8 0 0 0 4.6914E-05 2 69187 76.357 76.357 1 1.1104 1.1587 0 22426000 11759000 10668000 20724 1380 7825 8005 32530;32531 32531 LFQEDPEAFLLYHR 14 0 1 Unmodified _LFQEDPEAFLLYHR_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.9739 3 593.301783 1776.88352 79177.6 0.8861 0.00052573 0.72878 0.00043239 1.6149 0.00095811 593.301902325118 596.638214306688 119.39 0.60116 119.39 119.09 119.69 7.6294E-06 98 24 7 0 0 0 0.018432 1 70652 23.934 21.864 1 0.73349 0.61405 0 10226000 5067000 5158900 20725 1380 7825 8005 32532 32532 LFQEDPEAFLLYHR 14 0 1 Unmodified _LFQEDPEAFLLYHR_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.3018 3 593.301783 1776.88352 79981.24 0.69274 0.000411 0.58519 0.00034719 1.2779 0.0007582 593.301919478685 596.638123201026 119.18 0.50807 119.18 118.83 119.34 -7.6294E-06 81 19 8 0 0 0 0.041448 1 69561 19.271 19.271 1 0.75787 0.62083 0 8943500 5027200 3916300 20726 1380 7825 8005 32533 32533 LFQITPDK 8 1 0 Unmodified _LFQITPDK_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9;J3KSI1;J3KSE6;J3KTR0 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.2713 2 481.271293 960.528032 87014.42 0.059156 2.847E-05 0.25588 0.00012315 0.31504 0.00015162 481.2711755912 485.278530463034 68.295 1.2446 68.295 67.681 68.926 0 438 108 6 0 0 0 2.6735E-05 2 39605 138.9 40.762 1 0.91277 1.0005 0 52734000 26441000 26293000 20727 1955 7826 8006 32534;32535 32535 LFQITPDK 8 1 0 Unmodified _LFQITPDK_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9;J3KSI1;J3KSE6;J3KTR0 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.2716 2 481.271293 960.528032 86701.94 0.14415 6.9375E-05 -0.07959 -3.8305E-05 0.064559 3.107E-05 481.270910339753 485.278382772787 67.079 1.5669 67.079 66.235 67.802 0 428 129 6 0 0 0 0.0014375 2 39676 109.01 38.745 1 0.90412 1.014 0 78254000 42406000 35848000 20728 1955 7826 8006 32536;32537 32537 LFQITPDK 8 1 0 Unmodified _LFQITPDK_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9;J3KSI1;J3KSE6;J3KTR0 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.2715 2 481.271293 960.528032 87230.43 0.074566 3.5886E-05 0.094797 4.5623E-05 0.16936 8.1509E-05 481.271508281275 485.278464918858 77.743 1.5268 77.743 76.841 78.368 0 353 101 7 0 0 0 0.009998 2 41575 73.248 23.89 1 1.2345 0.98413 0 9623200 4567000 5056200 20729 1955 7826 8006 32538;32539 32539 LFQITPDK 8 1 0 Unmodified _LFQITPDK_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9;J3KSI1;J3KSE6;J3KTR0 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.2787 2 481.271293 960.528032 86551.61 0.35412 0.00017043 -0.11846 -5.7009E-05 0.23567 0.00011342 481.271344626938 485.278357775735 77.949 1.4857 77.949 77.18 78.666 -7.6294E-06 328 97 6 0 0 0 0.0015831 2 40828 107.66 39.243 1 1.1983 0.98011 0 8343400 3922300 4421100 20730 1955 7826 8006 32540;32541 32540 LFQLPTPPLSR 11 0 1 Unmodified _LFQLPTPPLSR_ 0 0 0 A0A0C4DGS9;B3KN25;A0A024R0C0;Q9Y6K0 A0A0C4DGS9 A0A0C4DGS9 CEPT1 Choline/ethanolaminephosphotransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.3607 2 634.871705 1267.72886 86421.62 1.1965 0.00075963 -0.83816 -0.00053212 0.35836 0.00022751 634.870823045856 639.87565723367 111.51 0.32343 111.51 111.39 111.71 7.6294E-06 49 22 3 0 0 0 0.0076318 1 70232 52.255 44.606 1 0.912 0.95369 0 4693700 2308800 2384900 20731 41 7827 8007 32542 32542 LFQLPTPPLSR 11 0 1 Unmodified _LFQLPTPPLSR_ 0 0 0 A0A0C4DGS9;B3KN25;A0A024R0C0;Q9Y6K0 A0A0C4DGS9 A0A0C4DGS9 CEPT1 Choline/ethanolaminephosphotransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8759 2 634.871705 1267.72886 81760.41 0.55028 0.00034936 -1.11 -0.00070472 -0.55974 -0.00035536 634.870559241128 639.87542853625 110.9 0.25741 110.9 110.81 111.07 7.6294E-06 54 19 4 0 0 0 0.0026948 1 71451 61.161 61.161 1 1.0067 1.0156 0 6028400 2126900 3901600 20732 41 7827 8007 32543 32543 LFQVEYAIEAIK 12 1 0 Unmodified _LFQVEYAIEAIK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.4031 2 712.39521 1422.77587 73196.29 0.92678 0.00066023 0.33349 0.00023758 1.2603 0.00089781 712.395481418699 716.402389071427 116.3 0.53092 116.3 116.05 116.58 0 178 34 7 0 0 0 1.174E-05 2 74118 107.24 67.199 1 1.9892 2.0869 0 30326000 11031000 19295000 20733 595 7828 8008 32544;32545 32544 LFQVEYAIEAIK 12 1 0 Unmodified _LFQVEYAIEAIK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.403 2 712.39521 1422.77587 72840.35 0.98052 0.00069852 -0.040589 -2.8915E-05 0.93993 0.0006696 712.395302070201 716.402083132216 115.73 0.53294 115.73 115.47 116 0 211 34 9 0 0 0 2.0721E-08 2 75448 120.68 120.68 1 1.9164 2.1023 0 41179000 14386000 26793000 20734 595 7828 8008 32546;32547 32546 LFQVEYAIEAIK 12 1 0 Unmodified _LFQVEYAIEAIK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.8972 2 712.39521 1422.77587 73138.58 1.213 0.00086414 -0.050893 -3.6256E-05 1.1621 0.00082788 712.39513722803 716.40201760219 128.2 0.54617 128.2 127.98 128.53 0 96 22 6 0 0 0 0.00023876 1 77395 86.624 57.537 1 1.4403 1.1444 0 6553400 3078800 3474600 20735 595 7828 8008 32548 32548 LFSIVRPR 8 0 2 Unmodified _LFSIVRPR_ 0 0 1 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 329.8746 3 329.874788 986.602535 105697.4 -0.056921 -1.8777E-05 0.063105 2.0817E-05 0.0061838 2.0399E-06 329.874684695459 336.546953237169 58.726 0.74554 58.726 58.314 59.059 0 172 61 4 0 0 0 0.0096597 2 33313 51.854 28.426 1 0.9754 1.0523 0 16133000 9406500 6726100 20736 903 7829 8009 32549;32550 32550 LFSIVRPR 8 0 2 Unmodified _LFSIVRPR_ 0 0 1 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 336.5471 3 329.874788 986.602535 106397 -0.022151 -7.3072E-06 -0.088126 -2.907E-05 -0.11028 -3.6378E-05 329.874690782435 336.546828966412 56.432 0.63279 56.432 56.169 56.802 0 100 46 5 0 0 0 0.010358 1 32383 57.177 22.37 1 1.0769 1.1053 0 12006000 5141100 6865000 20737 903 7829 8009 32551 32551 LFSLELVDESGEIR 14 0 1 Unmodified _LFSLELVDESGEIR_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.9197 2 803.919778 1605.825 NaN NaN NaN 1.4231 0.001144 NaN NaN NaN NaN 116.45 0.55934 116.45 116.14 116.7 0 0 0 0 4.9902E-10 1 74278 114.86 91.543 1 NaN NaN 0 11491000 11491000 0 20738 1525 7830 8010 32552 32552 LFSLELVDESGEIR 14 0 1 Unmodified _LFSLELVDESGEIR_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.9207 2 803.919778 1605.825 NaN NaN NaN 0.11805 9.4904E-05 NaN NaN NaN NaN 115.91 0.55099 115.91 115.7 116.25 0 0 0 0 5.1424E-06 1 75668 94.465 75.222 1 NaN NaN 0 16937000 16937000 0 20739 1525 7830 8010 32553 32553 LFSLELVDESGEIR 14 0 1 Unmodified _LFSLELVDESGEIR_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.4211 2 803.919778 1605.825 68434.28 1.0646 0.00085583 -0.61634 -0.00049549 0.44823 0.00036034 803.919462057608 809.425420159182 128.12 0.86099 128.12 127.86 128.72 0 112 35 6 0 0 0 0.0089888 1 77240 50.484 50.484 1 0.27996 0.24078 0 7672500 5806300 1866200 20740 1525 7830 8010 32554 32554 LFSLELVDESGEIR 14 0 1 Unmodified _LFSLELVDESGEIR_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 808.9252 2 803.919778 1605.825 NaN NaN NaN 0.017538 1.4099E-05 NaN NaN NaN NaN 127.91 0.32283 127.91 127.76 128.09 0 0 0 0 0.011174 2 76235 51.286 32.043 1 NaN NaN 0 1310800 0 1310800 20741 1525 7830 8010 32555;32556 32555 LFSLPAQPLWNNR 13 0 1 Unmodified _LFSLPAQPLWNNR_ 0 0 0 A0A024R9J0;O60216 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.4269 2 778.422625 1554.8307 69398.64 0.62416 0.00048586 -0.382 -0.00029736 0.24216 0.0001885 778.422314399405 783.426496261237 126.68 0.53356 126.68 126.42 126.95 0 77 23 5 0 0 0 0.010685 2 75325 45.137 45.137 1 1.8494 1.5727 0 2963000 1047800 1915200 20742 280 7831 8011 32557;32558 32557 LFSNFSGADLLK 12 1 0 Unmodified _LFSNFSGADLLK_ 0 0 0 A8KAN5;A0A024R2L0;Q9NZI7;A0A024R2J0;F8WEP8 A8KAN5 A8KAN5 UBP1 Upstream-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.3508 2 656.350803 1310.68705 76125.02 1.1955 0.00078468 1.4562 0.00095577 2.6517 0.0017404 656.352201554231 660.358235858759 108.7 0.43857 108.7 108.5 108.94 7.6294E-06 90 29 4 0 0 0 0.014846 1 67919 43.308 43.308 1 0.75174 0.758 0 10037000 4694900 5341800 20743 115 7832 8012 32559 32559 LFSNFSGADLLK 12 1 0 Unmodified _LFSNFSGADLLK_ 0 0 0 A8KAN5;A0A024R2L0;Q9NZI7;A0A024R2J0;F8WEP8 A8KAN5 A8KAN5 UBP1 Upstream-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3588 2 656.350803 1310.68705 NaN NaN NaN 0.078524 5.1539E-05 NaN NaN NaN NaN 108.13 0.41302 108.13 107.89 108.3 -7.6294E-06 0 0 0 0.025253 1 69161 49.3 16.98 1 NaN NaN 0 2909900 0 2909900 20744 115 7832 8012 32560 32560 LFSPLHSGTR 10 0 1 Unmodified _LFSPLHSGTR_ 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 372.2048 3 372.204974 1113.59309 100388.3 0.28534 0.0001062 -0.089797 -3.3423E-05 0.19554 7.2781E-05 372.204834435867 375.540977229682 42.032 0.37382 42.032 41.893 42.267 0 93 27 5 0 0 0 0.029063 2 22245 32.329 18.929 1 1.1639 1.1706 0 17360000 8242500 9117300 20745 1680 7833 8013 32561;32562 32562 LFSSVTFETVEESK 14 1 0 Unmodified _LFSSVTFETVEESK_ 0 0 0 A8K5Y7;Q9HAV4;B3KPQ5;Q9H8N6;B3KNC6 A8K5Y7 A8K5Y7 XPO5 Exportin-5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.9089 2 801.898511 1601.78247 NaN NaN NaN -0.026039 -2.0881E-05 NaN NaN NaN NaN 96.342 0.17032 96.342 96.254 96.425 0 0 0 0 4.7137E-06 1 58715 95.401 71.058 1 NaN NaN 0 8071100 0 8071100 20746 754 7834 8014 32563 32563 LFSSVTFETVEESK 14 1 0 Unmodified _LFSSVTFETVEESK_ 0 0 0 A8K5Y7;Q9HAV4;B3KPQ5;Q9H8N6;B3KNC6 A8K5Y7 A8K5Y7 XPO5 Exportin-5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.9006 2 801.898511 1601.78247 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.371 1 96.371 95.871 96.871 0 0 0 0 0.013821 1 58711 48.44 21.342 1 20747 754 7834 8014 32564 32564 LFSSVTFETVEESK 14 1 0 Unmodified _LFSSVTFETVEESK_ 0 0 0 A8K5Y7;Q9HAV4;B3KPQ5;Q9H8N6;B3KNC6 A8K5Y7 A8K5Y7 XPO5 Exportin-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 805.9063 2 801.898511 1601.78247 68403.48 1.139 0.0009134 -0.46607 -0.00037374 0.67298 0.00053966 801.897857340501 805.905079249313 95.721 0.53519 95.721 95.455 95.99 0 136 43 5 0 0 0 0.0001556 4 59501 75.819 69.13 1 1.7827 1.8293 0 9460800 3033000 6427700 20748 754 7834 8014 32565;32566;32567;32568 32566 LFTAESLIGLK 11 1 0 Unmodified _LFTAESLIGLK_ 0 0 0 B0YIW5;Q6MZV5;B0YIW6;P48444 B0YIW5 B0YIW5 ARCN1;DKFZp686M09245 Coatomer subunit delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.3596 2 596.352814 1190.69108 NaN NaN NaN -0.20969 -0.00012505 NaN NaN NaN NaN 112.75 0.54003 112.75 112.51 113.05 0 0 0 0 0.0025795 1 71266 73.233 54.503 1 NaN NaN 0 2102000 0 2102000 20749 810 7835 8015 32569 32569 LFTAESLIGLK 11 1 0 Unmodified _LFTAESLIGLK_ 0 0 0 B0YIW5;Q6MZV5;B0YIW6;P48444 B0YIW5 B0YIW5 ARCN1;DKFZp686M09245 Coatomer subunit delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.3597 2 596.352814 1190.69108 NaN NaN NaN -0.65563 -0.00039099 NaN NaN NaN NaN 112.17 0.42145 112.17 111.93 112.35 0 0 0 0 0.013486 1 72542 55.064 36.333 1 NaN NaN 0 4108000 0 4108000 20750 810 7835 8015 32570 32570 LFTAHNNMTNYATVWASK 18 1 0 Oxidation (M) _LFTAHNNM(ox)TNYATVWASK_ LFTAHNNM(1)TNYATVWASK LFTAHNNM(44.58)TNYATVWASK 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.3374 3 695.666796 2083.97856 67142.34 0.4436 0.0003086 -0.54497 -0.00037912 -0.10137 -7.0517E-05 696.0004112674 698.337005422476 74.463 0.74162 74.463 74.103 74.844 0 247 61 6 0 0 0 0.00012219 2 43609 44.577 38.661 1 1.4833 1.549 0 29935000 12020000 17916000 20751 1691 7836 8016 32571;32572 32571 1514 LFTLTALR 8 0 1 Unmodified _LFTLTALR_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A1B0GTT3;A0A0U1RQQ5 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.791 2 467.789653 933.564752 88369.72 0.34145 0.00015973 0.46227 0.00021625 0.80373 0.00037597 467.790113340413 472.793816609747 98.061 0.7149 98.061 97.688 98.403 -7.6294E-06 173 62 4 0 0 0 0.0023621 2 61285 100.45 41.246 1 1.5612 1.6842 0 26266000 9836000 16430000 20752 1575 7837 8017 32573;32574 32574 LFTNAVESLDEEEK 14 1 0 Unmodified _LFTNAVESLDEEEK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.391 2 812.39105 1622.76755 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.31 1 87.31 86.81 87.81 0 0 0 0 0.00067093 1 52697 80.623 66.96 1 20753 1849 7838 8018 32575 32575 LFTNAVESLDEEEK 14 1 0 Unmodified _LFTNAVESLDEEEK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.4116 2 812.39105 1622.76755 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.343 1 87.343 86.843 87.843 0 0 0 0 0.00040095 1 52713 84.479 66.04 1 20754 1849 7838 8018 32576 32576 LFTNAVESLDEEEK 14 1 0 Unmodified _LFTNAVESLDEEEK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.8948 2 812.39105 1622.76755 70501.79 0.49618 0.00040309 0.39385 0.00031996 0.89002 0.00072305 812.892935012188 816.398617282459 100.09 0.53741 100.09 99.775 100.31 0 79 44 4 0 0 0 0.0081729 1 56590 39.148 39.148 1 1.8098 1.416 0 3850100 868010 2982100 20755 1849 7838 8018 32577 32577 LFTNFSGADLLK 12 1 0 Unmodified _LFTNFSGADLLK_ 0 0 0 A0A024R120;Q12800;F8VWL0 A0A024R120 A0A024R120 TFCP2 Alpha-globin transcription factor CP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.3663 2 663.358628 1324.7027 71331.67 0.91018 0.00060378 -0.42872 -0.0002844 0.48146 0.00031938 663.358662852505 667.365569926775 110.99 0.42487 110.99 110.84 111.26 -7.6294E-06 71 27 5 0 0 0 0.0023958 2 69918 58.699 58.699 1 0.95522 0.99626 0 11739000 5770000 5969000 20756 66 7839 8019 32578;32579 32579 LFTNFSGADLLK 12 1 0 Unmodified _LFTNFSGADLLK_ 0 0 0 A0A024R120;Q12800;F8VWL0 A0A024R120 A0A024R120 TFCP2 Alpha-globin transcription factor CP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3663 2 663.358628 1324.7027 75206.67 0.71173 0.00047213 0.64746 0.0004295 1.3592 0.00090163 663.358728716092 667.365988487387 110.38 0.47599 110.38 110.2 110.68 -7.6294E-06 88 34 4 0 0 0 0.00019881 2 71103 78.513 68.204 1 1.0257 1.0251 0 15269000 7932600 7336700 20757 66 7839 8019 32580;32581 32581 LFTPSPEIVK 10 1 0 Unmodified _LFTPSPEIVK_ 0 0 0 Q8TCS8 Q8TCS8 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.8334 2 565.826432 1129.63831 NaN NaN NaN -0.50474 -0.0002856 NaN NaN NaN NaN 84.318 0.28091 84.318 84.089 84.37 0 0 0 0 0.011328 1 50499 61.962 30.673 1 NaN NaN 0 4255500 0 4255500 20758 1931 7840 8020 32582 32582 LFVASNQGALHIVQLSGGSFK 21 1 0 Unmodified _LFVASNQGALHIVQLSGGSFK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.0644 3 725.063656 2172.16914 71766.52 0.84513 0.00061278 -0.01235 -8.9543E-06 0.83278 0.00060382 725.398321270411 728.069240245242 107.33 0.81877 107.33 106.96 107.77 0 398 61 9 0 0 0 3.4048E-29 2 66750 99.059 99.059 1 0.98485 1.1111 0 78081000 41575000 36505000 20759 1955 7841 8021 32583;32584 32583 LFVASNQGALHIVQLSGGSFK 21 1 0 Unmodified _LFVASNQGALHIVQLSGGSFK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.0695 3 725.063656 2172.16914 71471.45 0.89397 0.00064819 0.05674 4.114E-05 0.95071 0.00068933 725.39839692943 728.069215988989 106.45 0.73486 106.45 106.19 106.93 0 391 56 9 0 0 0 1.106E-11 2 67945 74.698 74.698 1 0.94281 1.0537 0 98226000 51412000 46815000 20760 1955 7841 8021 32585;32586 32586 LFVASNQGALHIVQLSGGSFK 21 1 0 Unmodified _LFVASNQGALHIVQLSGGSFK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.3984 3 725.063656 2172.16914 70493.09 0.98262 0.00071246 -0.14137 -0.0001025 0.84125 0.00060996 725.398241074683 728.069095957337 118.03 0.76356 118.03 117.82 118.59 0 199 31 11 0 0 0 1.4925E-16 2 69648 87.772 87.772 1 1.3182 1.1023 0 50377000 21082000 29295000 20761 1955 7841 8021 32587;32588 32588 LFVASNQGALHIVQLSGGSFK 21 1 0 Unmodified _LFVASNQGALHIVQLSGGSFK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.0701 3 725.063656 2172.16914 70886.96 0.57814 0.00041919 0.25381 0.00018403 0.83195 0.00060321 725.398406315277 728.069385631959 117.85 0.63411 117.85 117.6 118.23 0 202 29 10 0 0 0 8.8894E-16 2 68515 97.271 97.271 1 1.2793 1.063 0 37437000 16788000 20649000 20762 1955 7841 8021 32589;32590 32589 LFVDTDADTR 10 0 1 Unmodified _LFVDTDADTR_ 0 0 0 A0A024R912;Q9BZX2 A0A024R912 A0A024R912 UCK2 Uridine kinase;Uridine-cytidine kinase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.7858 2 576.78021 1151.54587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.464 1 54.464 53.964 54.964 0 0 0 0 0.00032481 1 31133 76.1 57.324 1 20763 268 7842 8022 32591 32591 LFVEALGQIGPAPPLK 16 1 0 Unmodified _LFVEALGQIGPAPPLK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 825.9878 2 825.484891 1648.95523 68104.19 1.0516 0.0008681 0.29565 0.00024406 1.3473 0.0011122 825.484865619004 829.993888194273 119.35 0.51713 119.35 119.19 119.71 -7.6294E-06 158 34 6 0 0 0 1.5436E-08 1 76806 103.91 103.91 1 0.83308 0.87711 0 16430000 8441900 7988100 20764 1259 7843 8023 32592 32592 LFVEALGQIGPAPPLK 16 1 0 Unmodified _LFVEALGQIGPAPPLK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 825.4858 2 825.484891 1648.95523 68635.48 0.78491 0.00064793 0.5131 0.00042356 1.298 0.0010715 825.485051291488 829.492425050045 118.94 0.53694 118.94 118.74 119.27 0 159 35 7 0 0 0 1.8151E-12 2 78274 121.68 121.68 1 0.79423 0.80349 0 16445000 7679200 8766200 20765 1259 7843 8023 32593;32594 32593 LFVEALGQIGPAPPLK 16 1 0 Unmodified _LFVEALGQIGPAPPLK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 825.9855 2 825.484891 1648.95523 68481.33 0.83407 0.00068851 0.37596 0.00031035 1.21 0.00099886 825.986854790381 829.491963392912 131.48 0.51556 131.48 131.28 131.79 0 95 23 6 0 0 0 0.00028384 1 79824 55.98 55.98 1 0.65061 0.52815 0 2714800 1745900 968920 20766 1259 7843 8023 32595 32595 LFVEALGQIGPAPPLK 16 1 0 Unmodified _LFVEALGQIGPAPPLK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 825.4852 2 825.484891 1648.95523 68380.88 1.0545 0.00087044 -0.10279 -8.485E-05 0.95167 0.00078559 825.484671945413 829.491301914669 131.31 0.51462 131.31 131.05 131.56 0 90 22 6 0 0 0 0.00023457 1 78785 58.274 58.274 1 0.60192 0.47279 0 3297300 2019100 1278200 20767 1259 7843 8023 32596 32596 LFVGGLK 7 1 0 Unmodified _LFVGGLK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 371.2409 2 367.233982 732.453411 99033.98 0.27481 0.00010092 -0.0051247 -1.882E-06 0.26968 9.9036E-05 367.233913579368 371.241019164187 57.214 1.2199 57.214 56.827 58.047 0 418 97 6 0 0 0 0.032615 1 32698 65.263 0 1 2.1856 2.4707 0 144580000 40332000 104250000 20768 1706 7844 8024 32597 32597 LFVGGLK 7 1 0 Unmodified _LFVGGLK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 367.2337 2 367.233982 732.453411 98941.12 0.10508 3.859E-05 0.1431 5.2552E-05 0.24819 9.1143E-05 367.233932561747 371.241066258007 61.899 0.7846 61.899 61.653 62.437 -3.8147E-06 262 64 8 0 0 0 0.02838 1 35423 72.021 0 1 2.3849 2.7179 0 173070000 54610000 118460000 20769 1706 7844 8024 32598 32598 LFVGGLK 7 1 0 Unmodified _LFVGGLK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 367.2337 2 367.233982 732.453411 100720.6 -0.08773 -3.2217E-05 0.11671 4.286E-05 0.02898 1.0643E-05 367.233931214077 371.240974022983 65.24 1.1283 65.24 64.825 65.954 0 379 101 6 0 0 0 0.032615 1 37491 65.263 0 1 1.17 1.2806 0 51949000 24589000 27360000 20770 1706 7844 8024 32599 32599 LFVGGLK 7 1 0 Unmodified _LFVGGLK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 371.2408 2 367.233982 732.453411 97659.28 0.031007 1.1387E-05 -0.068982 -2.5333E-05 -0.037975 -1.3946E-05 367.233867834883 371.240997167353 56.043 1.2808 56.043 55.547 56.828 0 427 98 7 0 0 0 0.040059 1 31990 59.641 0 1 2.2284 2.5681 0 182360000 58178000 124180000 20771 1706 7844 8024 32600 32600 LFVGGLK 7 1 0 Unmodified _LFVGGLK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 367.234 2 367.233982 732.453411 100582.7 0.12521 4.5982E-05 -0.065294 -2.3978E-05 0.059918 2.2004E-05 367.23383387774 371.240985057534 60.499 0.90678 60.499 60.295 61.201 0 178 74 7 0 0 0 0.02838 2 35347 72.021 0 1 2.333 2.7045 0 215690000 64312000 151380000 20772 1706 7844 8024 32601;32602 32602 LFVGGLK 7 1 0 Unmodified _LFVGGLK_ 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 367.2337 2 367.233982 732.453411 99934.84 0.088098 3.2353E-05 -0.013471 -4.9472E-06 0.074627 2.7405E-05 367.23385696621 371.240944084568 63.736 0.93398 63.736 63.377 64.311 0 352 84 6 0 0 0 0.02838 1 37454 72.021 0 1 1.1988 1.3321 0 50270000 24686000 25584000 20773 1706 7844 8024 32603 32603 LFVGNLPADITEDEFK 16 1 0 Unmodified _LFVGNLPADITEDEFK_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.4595 2 904.459267 1806.90398 64031.77 0.88687 0.00080214 -0.1903 -0.00017212 0.69657 0.00063002 904.459787016618 908.466215363269 118.21 0.64231 118.21 117.91 118.55 0 239 38 10 0 0 0 9.9802E-05 2 75698 79.492 79.492 1 1.9084 2.1234 0 60750000 22071000 38679000 20774 1510 7845 8025 32604;32605 32604 LFVGNLPADITEDEFK 16 1 0 Unmodified _LFVGNLPADITEDEFK_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 908.4683 2 904.459267 1806.90398 63957.32 0.96626 0.00087395 -0.21507 -0.00019452 0.75119 0.00067942 904.960717551634 908.466198091919 117.76 0.78191 117.76 117.3 118.08 0 273 44 9 0 0 0 2.5676E-06 2 77247 99.5 99.5 1 1.8627 2.0996 0 67787000 23757000 44030000 20775 1510 7845 8025 32606;32607 32607 LFVGNLPADITEDEFK 16 1 0 Unmodified _LFVGNLPADITEDEFK_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 908.9689 2 904.459267 1806.90398 64574.02 0.49988 0.00045212 0.51468 0.00046551 1.0146 0.00091763 904.459810459704 908.466828517251 130.29 0.59312 130.29 130.02 130.62 0 158 30 8 0 0 0 0.00017097 1 78961 61.235 61.235 1 1.021 0.81866 0 7497400 4157400 3340000 20776 1510 7845 8025 32608 32608 LFVGNLPADITEDEFK 16 1 0 Unmodified _LFVGNLPADITEDEFK_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 908.9689 2 904.459267 1806.90398 64619.95 0.74361 0.00067257 0.35287 0.00031916 1.0965 0.00099172 904.961025296745 908.466867568793 130.12 0.60049 130.12 129.86 130.46 0 147 24 8 0 0 0 4.0981E-05 2 77901 84.365 84.365 1 0.93559 0.77154 0 12045000 6202600 5841900 20777 1510 7845 8025 32609;32610 32610 LFVGNLPADITEDEFKR 17 1 1 Unmodified _LFVGNLPADITEDEFKR_ 0 0 1 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.3428 3 655.342307 1963.00509 78182.66 0.86065 0.00056402 0.0568 3.7223E-05 0.91745 0.00060124 655.676973582137 661.683917167402 118.71 0.33908 118.71 118.49 118.83 0 52 17 4 0 0 0 0.018382 1 70105 20.65 20.65 1 0.89048 0.80177 0 1953300 979840 973450 20778 1510 7846 8026 32611 32611 LFVGNLPPDITEEEMRK 17 1 1 Oxidation (M) _LFVGNLPPDITEEEM(ox)RK_ LFVGNLPPDITEEEM(1)RK LFVGNLPPDITEEEM(42.81)RK 0 1 1 A8K525;A0A0S2Z4Z9;Q15233;C9IZL7;C9JYS8;A0A0S2Z4E7;C9J4X2 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.0172 3 668.675069 2003.00338 74861.64 0.83186 0.00055624 -0.44523 -0.00029772 0.38663 0.00025853 669.009301172253 674.68217294869 90.266 1.0551 90.266 89.757 90.812 0 216 90 5 0 0 0 0.00039668 1 55814 42.813 42.813 1 3.1807 3.6587 0 26520000 5590300 20930000 20779 573 7847 8027 32612 32612 427 LFVGSIPK 8 1 0 Unmodified _LFVGSIPK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;B4DMD1;Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645 B2R7W4;Q05CK9 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.7725 2 430.765646 859.516739 97020.91 -0.07217 -3.1088E-05 -0.62951 -0.00027117 -0.70169 -0.00030226 430.765365884635 434.77234521475 74.132 1.0447 74.132 73.623 74.667 0 198 90 4 0 0 0 0.02313 1 43575 56.721 38.954 1 2.1562 2.2134 0 12987000 4353900 8633600 20780 855;864 7848 8028 32613 32613 LFVGSIPK 8 1 0 Unmodified _LFVGSIPK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;B4DMD1;Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645 B2R7W4;Q05CK9 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.7725 2 430.765646 859.516739 NaN NaN NaN -1.009 -0.00043465 NaN NaN NaN NaN 72.888 0.72456 72.888 72.511 73.235 0 0 0 0 0.030732 1 43705 58.815 25.077 1 NaN NaN 0 4821500 0 4821500 20781 855;864 7848 8028 32614 32614 LFVIAQK 7 1 0 Unmodified _LFVIAQK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.7672 2 409.760364 817.506175 93734.2 -0.20273 -8.307E-05 0.59588 0.00024417 0.39316 0.0001611 409.760425772291 413.767609562123 62.062 0.47071 62.062 61.929 62.399 0 159 39 7 0 0 0 0.00050691 1 35574 143.22 83.905 1 1.0142 1.1467 0 145420000 66491000 78924000 20782 2132 7849 8029 32615 32615 LFVIAQK 7 1 0 Unmodified _LFVIAQK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.7674 2 409.760364 817.506175 93604.06 -0.4336 -0.00017767 0.98832 0.00040497 0.55472 0.0002273 409.760600479781 413.767775941328 60.689 0.51341 60.689 60.55 61.063 0 151 45 6 0 0 0 0.0097462 1 35478 126.05 65.642 1 0.96164 1.078 0 79563000 42084000 37479000 20783 2132 7849 8029 32616 32616 LFVINEVCEMK 11 1 0 Oxidation (M) _LFVINEVCEM(ox)K_ LFVINEVCEM(1)K LFVINEVCEM(109.29)K 0 1 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3513 2 699.343806 1396.67306 71138.48 0.77715 0.0005435 -0.032175 -2.2501E-05 0.74498 0.000521 699.344014542322 703.351061741364 85.348 0.96701 85.348 84.929 85.896 0 471 79 9 0 0 0 4.2585E-06 2 51073 109.29 109.29 1 1.2815 1.4584 0 168690000 71880000 96808000 20784 1934 7850 8030 32617;32618 32617 1773 LFVINEVCEMK 11 1 0 Oxidation (M) _LFVINEVCEM(ox)K_ LFVINEVCEM(1)K LFVINEVCEM(101.9)K 0 1 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 703.3522 2 699.343806 1396.67306 71514.45 0.70167 0.00049071 -0.3392 -0.00023722 0.36247 0.00025349 699.343958187035 703.35048085706 97.57 1.1334 97.57 97.141 98.274 0 256 68 6 0 0 0 1.3447E-05 2 54870 101.9 101.9 1 0.95465 0.7641 0 20714000 10713000 10001000 20785 1934 7850 8030 32619;32620 32619 1773 LFVINEVCEMK 11 1 0 Oxidation (M) _LFVINEVCEM(ox)K_ LFVINEVCEM(1)K LFVINEVCEM(75.29)K 0 1 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.3506 2 699.343806 1396.67306 71340.77 0.39483 0.00027612 -0.01115 -7.7979E-06 0.38368 0.00026832 699.3440881812 703.350718598668 97.428 1.0608 97.428 97.038 98.099 7.6294E-06 221 58 6 0 0 0 0.00023196 2 53936 75.294 73.25 1 1.0272 0.82217 0 21134000 11659000 9475500 20786 1934 7850 8030 32621;32622 32621 1773 LFVINEVCEMK 11 1 0 Unmodified _LFVINEVCEMK_ 0 0 0 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.3469 2 691.346348 1380.67814 73153.58 0.82593 0.000571 -0.05277 -3.6482E-05 0.77316 0.00053452 691.346309679536 695.353763239437 113.07 0.54951 113.07 112.86 113.41 0 105 26 8 0 0 0 0.0057959 2 65804 55.567 53.756 1 1.6696 1.3147 0 5731600 2013000 3718500 20787 1934 7850 8031 32623;32624 32624 LFVSDGVPGCLPVLAAAGR 19 0 1 Unmodified _LFVSDGVPGCLPVLAAAGR_ 0 0 0 A8K492;P56192;B4E0E9;A0A024RBA2;F5H2V6;F8VS26;F8W0M7;F8W0S4;F8VZZ9;F8VPL7 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.0164 2 950.011478 1898.0084 63263.97 1.0112 0.00096069 0.33951 0.00032254 1.3507 0.0012832 950.513562994561 955.015703079699 121.85 0.44355 121.85 121.62 122.06 0 120 28 6 0 0 0 3.9757E-08 3 78771 92.247 86.753 1 2.5868 2.6225 0 15148000 4456800 10692000 20788 732 7851 8032 32625;32626;32627 32626 LFVSDGVPGCLPVLAAAGR 19 0 1 Unmodified _LFVSDGVPGCLPVLAAAGR_ 0 0 0 A8K492;P56192;B4E0E9;A0A024RBA2;F5H2V6;F8VS26;F8W0M7;F8W0S4;F8VZZ9;F8VPL7 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 950.0146 2 950.011478 1898.0084 62185.37 1.0937 0.001039 0.15746 0.00014959 1.2512 0.0011886 950.513523127703 955.016046509981 121.39 0.37924 121.39 121.15 121.53 0 124 26 7 0 0 0 0.0056232 1 80385 31.228 31.228 1 2.5558 2.5696 0 11070000 2927300 8143000 20789 732 7851 8032 32628 32628 LFVTNDAATILR 12 0 1 Unmodified _LFVTNDAATILR_ 0 0 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3773 2 667.377352 1332.74015 NaN NaN NaN -0.36486 -0.0002435 NaN NaN NaN NaN 100.89 0.5415 100.89 100.65 101.19 7.6294E-06 0 0 0 0.014496 1 63553 63.283 42.382 1 NaN NaN 0 4927700 4927700 0 20790 1592 7852 8033 32629 32629 LFYLALPPTVYEAVTK 16 1 0 Unmodified _LFYLALPPTVYEAVTK_ 0 0 0 Q2VF42;Q2Q9H2;Q2Q9B7;A8K8D9;P11413;Q0PHS1;E7EUI8;B4DYA7;E9PD92;E7EM57;A7IZZ3 Q2VF42 Q2VF42 G6PD Glucose-6-phosphate 1-dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.5205 2 913.010938 1824.00732 64392.68 0.63414 0.00057898 -0.22301 -0.00020361 0.41113 0.00037537 913.012228775329 917.017960154886 132.56 0.59909 132.56 132.26 132.86 0 217 37 8 0 0 0 0.00028248 2 86556 56.043 56.043 1 4.5743 4.5129 0 19433000 4398300 15034000 20791 775 7853 8034 32630;32631 32630 LFYLALPPTVYEAVTK 16 1 0 Unmodified _LFYLALPPTVYEAVTK_ 0 0 0 Q2VF42;Q2Q9H2;Q2Q9B7;A8K8D9;P11413;Q0PHS1;E7EUI8;B4DYA7;E9PD92;E7EM57;A7IZZ3 Q2VF42 Q2VF42 G6PD Glucose-6-phosphate 1-dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.0123 2 913.010938 1824.00732 64872.29 0.83237 0.00075996 -0.44514 -0.00040641 0.38723 0.00035355 913.011746537809 917.017637202363 132.11 0.63043 132.11 131.79 132.42 0 222 40 9 0 0 0 0.010844 1 88498 33.229 33.229 1 4.2583 4.4677 0 24051000 3662200 20388000 20792 775 7853 8034 32632 32632 LGAGEGGEASVSPEK 15 1 0 Unmodified _LGAGEGGEASVSPEK_ 0 0 0 E7ETY2;B4DRA2;Q9UFD4;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.3394 2 694.33862 1386.66269 NaN NaN NaN -0.22227 -0.00015433 NaN NaN NaN NaN 34.188 0.4455 34.188 33.991 34.436 3.8147E-06 0 0 0 0.014555 1 14988 47.062 41.421 1 NaN NaN 0 1793500 1793500 0 20793 1712;1225 7854 8035 32633 32633 LGAGEGGEASVSPEK 15 1 0 Unmodified _LGAGEGGEASVSPEK_ 0 0 0 E7ETY2;B4DRA2;Q9UFD4;Q13428 E7ETY2;Q13428 Q13428 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.8398 2 694.33862 1386.66269 73946.48 0.55415 0.00038477 -0.35219 -0.00024454 0.20196 0.00014023 694.338419207026 698.345698382682 34.368 0.62629 34.368 34.119 34.746 0 123 48 6 0 0 0 0.0048092 2 14593 38.178 33.662 1 0.20774 0.16764 0 2543500 2011700 531840 20794 1712;1225 7854 8035 32634;32635 32634 LGAGPDGVEEIK 12 1 0 Unmodified _LGAGPDGVEEIK_ 0 0 0 B4DKZ2;B4DG22;B7ZB17;P51812 B4DKZ2 B4DKZ2 RPS6KA3 Ribosomal protein S6 kinase alpha-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.8198 2 592.81151 1183.60847 80069.13 0.5808 0.00034431 0.15441 9.1535E-05 0.73521 0.00043584 592.810785759189 596.818697090481 53.786 0.44191 53.786 53.569 54.01 0 109 34 4 0 0 0 2.4328E-05 2 30172 101.38 88.028 1 1.4855 1.5262 0 17507000 7119900 10387000 20795 971 7855 8036 32636;32637 32636 LGAGPDGVEEIK 12 1 0 Unmodified _LGAGPDGVEEIK_ 0 0 0 B4DKZ2;B4DG22;B7ZB17;P51812 B4DKZ2 B4DKZ2 RPS6KA3 Ribosomal protein S6 kinase alpha-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.819 2 592.81151 1183.60847 78398.65 0.71245 0.00042235 0.77121 0.00045718 1.4837 0.00087953 593.314439980564 596.81856969046 52.72 0.52773 52.72 52.409 52.936 -3.8147E-06 133 41 4 0 0 0 0.00024208 2 30069 87.298 63.268 1 1.1549 1.1718 0 16650000 8264800 8385000 20796 971 7855 8036 32638;32639 32639 LGALALPR 8 0 1 Unmodified _LGALALPR_ 0 0 0 Q6SPF0;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.7651 2 405.763438 809.512323 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.553 1 73.553 73.053 74.053 0 0 0 0 0.01006 1 43143 76.847 10.709 1 20797 1861 7856 8037 32640 32640 LGALGGAR 8 0 1 Unmodified _LGALGGAR_ 0 0 0 H0YNE5;H0YLG5;A0A024R9P6;Q96TC7;H0YLV7 H0YNE5 H0YNE5 RMDN3;FAM82C Regulator of microtubule dynamics protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 362.7209 2 357.716488 713.418422 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.602 1 26.602 26.102 27.102 1.9073E-06 0 0 0 0.011224 1 11983 75.311 18.8 1 20798 285 7857 8038 32641 32641 LGALTAEEIALK 12 1 0 Unmodified _LGALTAEEIALK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8607 2 614.861003 1227.70745 78965.35 0.97259 0.00059801 0.1113 6.8432E-05 1.0839 0.00066644 614.860936774866 618.868147205287 93.142 0.8549 93.142 92.669 93.524 -7.6294E-06 365 72 7 0 0 0 2.036E-08 2 56370 120.76 88.443 1 1.1287 1.2797 0 96387000 46792000 49595000 20799 1717 7858 8039 32642;32643 32643 LGALTAEEIALK 12 1 0 Unmodified _LGALTAEEIALK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.868 2 614.861003 1227.70745 77821.02 0.55355 0.00034035 -0.43264 -0.00026601 0.1209 7.4339E-05 614.860413443419 618.867931203716 92.356 0.83373 92.356 91.844 92.677 0 344 71 6 0 0 0 8.6843E-06 2 57179 108.67 77.98 1 1.1171 1.2587 0 68514000 30181000 38333000 20800 1717 7858 8039 32644;32645 32645 LGALTAEEIALK 12 1 0 Unmodified _LGALTAEEIALK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8683 2 614.861003 1227.70745 77468.95 0.51037 0.00031381 -0.83622 -0.00051416 -0.32585 -0.00020035 614.860175214944 618.86772757027 106.67 0.68533 106.67 106.38 107.06 0 196 43 6 0 0 0 0.0013544 2 60878 61.353 43.042 1 1.1246 0.89163 0 10278000 5067600 5210600 20801 1717 7858 8039 32646;32647 32646 LGAMDIDTHK 10 1 0 Oxidation (M) _LGAM(ox)DIDTHK_ LGAM(1)DIDTHK LGAM(67.11)DIDTHK 0 1 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 375.5211 3 372.849979 1115.52811 97589.83 0.23258 8.6716E-05 -0.50321 -0.00018762 -0.27063 -0.00010091 372.849782666389 375.521177920412 22.623 0.3871 22.623 22.436 22.823 0 76 16 7 0 0 0 0.00072723 1 8587 67.113 21.112 1 1.1567 1.1687 0 28605000 13837000 14768000 20802 1752 7859 8040 32648 32648 1602 LGAMDIDTHK 10 1 0 Oxidation (M) _LGAM(ox)DIDTHK_ LGAM(1)DIDTHK LGAM(47.89)DIDTHK 0 1 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 372.8498 3 372.849979 1115.52811 95973.78 -0.15707 -5.8563E-05 -0.31268 -0.00011658 -0.46974 -0.00017514 372.84973763937 375.521299615646 23.02 0.35626 23.02 22.823 23.179 -1.9073E-06 71 14 8 0 0 0 0.0043933 1 8933 47.894 21.221 1 1.2198 1.313 0 37767000 18095000 19673000 20803 1752 7859 8040 32649 32649 1602 LGAMDIDTHKK 11 2 0 Oxidation (M) _LGAM(ox)DIDTHKK_ LGAM(1)DIDTHKK LGAM(48.95)DIDTHKK 0 1 1 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 420.8909 3 415.5483 1243.62307 91738.98 0.1482 6.1585E-05 0.0052961 2.2008E-06 0.1535 6.3786E-05 415.548535797251 420.891004333287 18.456 0.4181 18.456 18.261 18.679 0 46 9 8 0 0 0 0.0035287 1 5390 48.948 43.464 1 0.92774 1.0954 0 41546000 24295000 17250000 20804 1752 7860 8041 32650 32650 1602 LGAMDIDTHKK 11 2 0 Oxidation (M) _LGAM(ox)DIDTHKK_ LGAM(1)DIDTHKK LGAM(77.06)DIDTHKK 0 1 1 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 420.8911 3 415.5483 1243.62307 91742.21 0.018604 7.7309E-06 0.33893 0.00014084 0.35753 0.00014857 415.548544732032 420.890998746331 18.368 0.55104 18.368 18.098 18.649 0 48 17 7 0 0 0 0.00015627 1 5031 77.062 68.058 1 1.0794 1.2494 0 47317000 28303000 19015000 20805 1752 7860 8041 32651 32651 1602 LGAMSAAPSQPNSQIR 16 0 1 Oxidation (M) _LGAM(ox)SAAPSQPNSQIR_ LGAM(1)SAAPSQPNSQIR LGAM(83.18)SAAPSQPNSQIR 0 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.4171 2 822.412128 1642.8097 67783.64 0.93749 0.000771 0.1137 9.3511E-05 1.0512 0.00086451 822.412823612244 827.415960075921 36.094 0.22667 36.094 35.986 36.213 0 52 20 4 0 0 0 2.6771E-05 2 18197 83.182 68.621 1 0.86195 0.87647 0 7326200 4283000 3043200 20806 2002 7861 8042 32652;32653 32652 1842 LGAMSAAPSQPNSQIR 16 0 1 Oxidation (M) _LGAM(ox)SAAPSQPNSQIR_ LGAM(1)SAAPSQPNSQIR LGAM(45.26)SAAPSQPNSQIR 0 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.3805 2 822.412128 1642.8097 72045.8 0.74938 0.0006163 -0.52634 -0.00043286 0.22305 0.00018344 822.411571243901 827.917250818627 36.389 0.26444 36.389 36.264 36.528 0 76 24 5 0 0 0 0.014003 1 18441 45.257 45.257 1 0.90338 0.90523 0 9053300 4843200 4210100 20807 2002 7861 8042 32654 32654 1842 LGAMSAAPSQPNSQIR 16 0 1 Oxidation (M) _LGAM(ox)SAAPSQPNSQIR_ LGAM(1)SAAPSQPNSQIR LGAM(108.35)SAAPSQPNSQIR 0 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.4123 2 822.412128 1642.8097 67595.01 1.3395 0.0011016 -0.52562 -0.00043228 0.81386 0.00066933 822.912753210158 827.415723215179 35.215 0.19258 35.215 35.131 35.324 3.8147E-06 49 17 4 0 0 0 3.6975E-09 2 17926 108.35 78.017 1 0.89994 0.88505 0 14355000 8081000 6273700 20808 2002 7861 8042 32655;32656 32656 1842 LGANILLETFK 11 1 0 Unmodified _LGANILLETFK_ 0 0 0 B7ZMF2;Q9NVI1;H3BP78;F8W7R3;B3KNW8 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.8666 2 609.858264 1217.70197 81786.16 0.2993 0.00018253 0.070912 4.3246E-05 0.37021 0.00022578 610.359303540922 613.865701964044 114.29 0.4448 114.29 114.09 114.53 0 84 31 4 0 0 0 0.00012288 3 72522 96.143 87.28 1 0.70571 0.71617 0 4630900 2394300 2236700 20809 1116 7862 8043 32657;32658;32659 32658 LGANILLETFK 11 1 0 Unmodified _LGANILLETFK_ 0 0 0 B7ZMF2;Q9NVI1;H3BP78;F8W7R3;B3KNW8 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.8662 2 609.858264 1217.70197 NaN NaN NaN 0.25765 0.00015713 NaN NaN NaN NaN 113.59 0.31425 113.59 113.46 113.77 0 0 0 0 0.0014106 1 73763 83.499 63.17 1 NaN NaN 0 2050600 0 2050600 20810 1116 7862 8043 32660 32660 LGANILLETFK 11 1 0 Unmodified _LGANILLETFK_ 0 0 0 B7ZMF2;Q9NVI1;H3BP78;F8W7R3;B3KNW8 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.8588 2 609.858264 1217.70197 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.57 1 113.57 113.07 114.07 0 0 0 0 0.00045477 1 73724 76.228 43.908 1 20811 1116 7862 8043 32661 32661 LGANILLETFK 11 1 0 Unmodified _LGANILLETFK_ 0 0 0 B7ZMF2;Q9NVI1;H3BP78;F8W7R3;B3KNW8 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.8655 2 609.858264 1217.70197 80148.77 0.76396 0.00046591 -0.28651 -0.00017473 0.47746 0.00029118 609.858106164458 613.865265852726 125.86 0.37274 125.86 125.69 126.06 0 45 17 4 0 0 0 0.042651 1 75650 35.71 35.71 1 0.99265 0.83353 0 1226200 678850 547330 20812 1116 7862 8043 32662 32662 LGANILLETFK 11 1 0 Unmodified _LGANILLETFK_ 0 0 0 B7ZMF2;Q9NVI1;H3BP78;F8W7R3;B3KNW8 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.3669 2 609.858264 1217.70197 83939.48 0.62632 0.00038197 -0.19369 -0.00011812 0.43263 0.00026384 609.857972589488 613.865211879911 125.67 0.39974 125.67 125.42 125.82 -7.6294E-06 46 18 4 0 0 0 0.055369 1 74593 33.961 33.961 1 1.2289 1.0795 0 1011800 380010 631790 20813 1116 7862 8043 32663 32663 LGAPENSGISTLER 14 0 1 Unmodified _LGAPENSGISTLER_ 0 0 0 C9JME2;Q9Y4F1;M0QYB0;A0A1B0GV68 C9JME2 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.377 2 722.375537 1442.73652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.224 1 65.224 64.724 65.724 0 0 0 0 0.01159 1 37551 50.284 32.225 1 20814 1139 7863 8044 32664 32664 LGAQALLGAAK 11 1 0 Unmodified _LGAQALLGAAK_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;Q8TBX0;J3QKT4;E7D7Y0;A0A1B2JLU7;J3KQ22;J3QL24 Q2TU78 Q2TU78 PIG45;PYCR1 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.8104 2 506.811116 1011.60768 87835.15 0.26762 0.00013563 0.34026 0.00017245 0.60788 0.00030808 506.811293497606 510.818282833314 72.202 0.63107 72.202 72.018 72.649 0 142 41 6 0 0 0 0.00024958 2 42169 90.657 65.734 1 0.68762 0.71158 0 14721000 8237200 6484300 20815 259 7864 8045 32665;32666 32665 LGAQALLGAAK 11 1 0 Unmodified _LGAQALLGAAK_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;Q8TBX0;J3QKT4;E7D7Y0;A0A1B2JLU7;J3KQ22;J3QL24 Q2TU78 Q2TU78 PIG45;PYCR1 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.8112 2 506.811116 1011.60768 86841.98 0.39031 0.00019781 0.25884 0.00013118 0.64915 0.00032899 506.811246878827 510.818190622976 70.858 0.65694 70.858 70.695 71.352 -7.6294E-06 148 35 6 0 0 0 2.7473E-08 2 42343 121.05 96.23 1 0.65501 0.69209 0 23640000 13762000 9878000 20816 259 7864 8045 32667;32668 32667 LGASLAFNNIYR 12 0 1 Unmodified _LGASLAFNNIYR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.8666 2 669.861869 1337.70918 74558.27 0.78377 0.00052502 -0.092346 -6.1859E-05 0.69142 0.00046316 669.861597562137 674.866326362288 95.467 1.0605 95.467 94.896 95.957 0 347 85 7 0 0 0 3.8421E-23 3 57823 160.59 121.44 1 0.65429 0.70861 0 49423000 29963000 19460000 20817 1665 7865 8046 32669;32670;32671 32669 LGASLAFNNIYR 12 0 1 Unmodified _LGASLAFNNIYR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.8672 2 669.861869 1337.70918 74915.79 0.7608 0.00050963 0.24475 0.00016395 1.0055 0.00067358 669.86171930688 674.86622814355 94.474 0.92184 94.474 94.12 95.042 -7.6294E-06 346 77 6 0 0 0 6.5346E-23 1 58682 158.76 127.68 1 0.62614 0.72761 0 63230000 36832000 26397000 20818 1665 7865 8046 32672 32672 LGASLAFNNIYR 12 0 1 Unmodified _LGASLAFNNIYR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.8661 2 669.861869 1337.70918 74264.45 0.60277 0.00040377 0.17416 0.00011666 0.77692 0.00052043 669.861415441431 674.866062063114 108.45 1.1306 108.45 107.87 109 0 226 56 7 0 0 0 0.0047147 1 61308 52.79 37.639 1 0.33836 0.28798 0 19461000 14431000 5029500 20819 1665 7865 8046 32673 32673 LGASNSPGQPNSVK 14 1 0 Unmodified _LGASNSPGQPNSVK_ 0 0 0 P49756 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.3494 2 678.349323 1354.68409 74939.66 0.89471 0.00060693 0.014204 9.6356E-06 0.90892 0.00061656 678.349343588102 682.356333246662 22.342 0.26376 22.342 22.197 22.46 0 68 16 7 0 0 0 3.6108E-22 2 8421 149.94 137.13 1 1.1601 1.184 0 13192000 5711600 7480200 20820 1587 7866 8047 32674;32675 32674 LGASNSPGQPNSVK 14 1 0 Unmodified _LGASNSPGQPNSVK_ 0 0 0 P49756 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.8574 2 678.349323 1354.68409 75825.39 0.4162 0.00028233 -0.23301 -0.00015806 0.18319 0.00012426 678.349144860404 682.356390534338 22.218 0.35308 22.218 22.107 22.46 -1.9073E-06 59 16 6 0 0 0 1.9079E-06 1 8223 107.06 87.294 1 1.0441 1.056 0 13102000 5762900 7339100 20821 1587 7866 8047 32676 32676 LGATIEHISVSPAGDLFCTSHSDNK 25 1 0 Unmodified _LGATIEHISVSPAGDLFCTSHSDNK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 889.1011 3 886.093903 2655.25988 64807.56 0.57198 0.00050683 0.22309 0.00019768 0.79507 0.0007045 886.094603077407 889.099521945588 106.29 0.3709 106.29 106.13 106.5 0 104 18 10 0 0 0 0.0062812 1 60744 22.655 22.655 1 1.1173 0.88626 0 6433000 3047000 3385900 20822 716 7867 8048 32677 32677 LGAVFNQVAFPLQYTPR 17 0 1 Unmodified _LGAVFNQVAFPLQYTPR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.0249 2 961.02016 1920.02577 63555.59 0.69993 0.00067265 0.25082 0.00024104 0.95075 0.00091369 961.01976142398 966.525890809174 121.67 0.50119 121.67 121.42 121.92 0 177 32 7 0 0 0 6.4002E-09 1 78600 101.39 101.39 1 1.3146 1.3568 0 20011000 8147100 11864000 20823 764 7868 8049 32678 32678 LGAVFNQVAFPLQYTPR 17 0 1 Unmodified _LGAVFNQVAFPLQYTPR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.5262 2 961.02016 1920.02577 63689.01 0.81308 0.00078139 0.012859 1.2357E-05 0.82594 0.00079374 961.019885688605 966.525544022876 121.2 0.41543 121.2 120.97 121.39 7.6294E-06 136 24 7 0 0 0 1.5103E-25 1 80148 147.33 147.33 1 1.3771 1.4656 0 24333000 10573000 13761000 20824 764 7868 8049 32679 32679 LGAVFNQVAFPLQYTPR 17 0 1 Unmodified _LGAVFNQVAFPLQYTPR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 961.5242 2 961.02016 1920.02577 63394.71 0.57738 0.00055487 -0.72058 -0.00069249 -0.1432 -0.00013762 961.01898334013 966.023684409853 134.05 0.44348 134.05 133.86 134.3 0 70 19 6 0 0 0 8.7041E-05 2 81740 61.375 61.375 1 1.0332 0.88948 0 7394100 2863000 4531200 20825 764 7868 8049 32680;32681 32681 LGAVFNQVAFPLQYTPR 17 0 1 Unmodified _LGAVFNQVAFPLQYTPR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.5046 2 961.02016 1920.02577 63431.47 0.74129 0.00071239 -0.68955 -0.00066267 0.051737 4.972E-05 961.019975347815 966.023851801192 133.91 0.52678 133.91 133.63 134.16 0 106 24 7 0 0 0 0.00068262 2 80603 46.159 46.159 1 1.4675 1.2231 0 6380300 2660800 3719500 20826 764 7868 8049 32682;32683 32682 LGAVPATSGPTTFK 14 1 0 Unmodified _LGAVPATSGPTTFK_ 0 0 0 G3XAG1;Q96ME7 G3XAG1 G3XAG1 ZNF512 Zinc finger protein 512 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.8699 2 673.86936 1345.72417 NaN NaN NaN -0.094201 -6.3479E-05 NaN NaN NaN NaN 66.735 0.52798 66.735 66.465 66.993 0 0 0 0 3.5543E-05 1 38444 91.855 70.984 1 NaN NaN 0 17364000 17364000 0 20827 1275 7869 8050 32684 32684 LGAVPATSGPTTFK 14 1 0 Unmodified _LGAVPATSGPTTFK_ 0 0 0 G3XAG1;Q96ME7 G3XAG1 G3XAG1 ZNF512 Zinc finger protein 512 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.8686 2 673.86936 1345.72417 NaN NaN NaN 0.021617 1.4567E-05 NaN NaN NaN NaN 65.578 0.40132 65.578 65.374 65.776 0 0 0 0 0.00024533 1 38597 83.397 56.882 1 NaN NaN 0 29621000 29621000 0 20828 1275 7869 8050 32685 32685 LGAVPATSGPTTFK 14 1 0 Unmodified _LGAVPATSGPTTFK_ 0 0 0 G3XAG1;Q96ME7 G3XAG1 G3XAG1 ZNF512 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.8692 2 673.86936 1345.72417 76240.53 0.51561 0.00034745 0.3177 0.00021409 0.83331 0.00056154 673.869113316996 677.876714586825 76.313 0.54651 76.313 76.103 76.65 0 166 40 5 0 0 0 0.0015344 2 40715 67.726 67.726 1 0.70859 0.56168 0 4746700 2751600 1995100 20829 1275 7869 8050 32686;32687 32686 LGAVYDVSHYNALLK 15 1 0 Unmodified _LGAVYDVSHYNALLK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.6391 3 554.966512 1661.87771 NaN NaN NaN -0.12269 -6.8088E-05 NaN NaN NaN NaN 92.84 0.76719 92.84 92.425 93.192 0 0 0 0 0.0033232 1 56162 50.155 36.742 1 NaN NaN 0 17848000 0 17848000 20830 1207 7870 8051 32688 32688 LGAVYDVSHYNALLK 15 1 0 Unmodified _LGAVYDVSHYNALLK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.6381 3 554.966512 1661.87771 82060.96 0.88275 0.00048989 -0.22327 -0.00012391 0.65948 0.00036599 554.96618681154 557.638079825956 91.675 0.66573 91.675 91.384 92.05 -7.6294E-06 184 58 6 0 0 0 6.8375E-05 1 56676 80.746 73.993 1 2.852 2.9685 0 33855000 10032000 23823000 20831 1207 7870 8051 32689 32689 LGCFNLTIK 9 1 0 Unmodified _LGCFNLTIK_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5HYD4 Q6IT96 Q6IT96 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.2913 2 533.291702 1064.56885 87884.98 0.29927 0.0001596 -0.035848 -1.9117E-05 0.26343 0.00014048 533.29161736814 537.298798447803 89.303 0.43353 89.303 89.055 89.488 0 111 34 5 0 0 0 0.0018198 1 55052 80.438 80.438 1 0.84569 0.92018 0 39632000 22546000 17086000 20832 1715 7871 8052 32690 32690 LGCFNLTIK 9 1 0 Unmodified _LGCFNLTIK_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5HYD4 Q6IT96 Q6IT96 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.299 2 533.291702 1064.56885 84129.42 0.48694 0.00025968 0.067162 3.5817E-05 0.5541 0.0002955 533.291644059381 537.298744590193 103.37 0.7105 103.37 103.02 103.73 -7.6294E-06 198 45 6 0 0 0 0.021043 1 58795 49.715 40.127 1 1.7781 1.411 0 10187000 3876400 6310800 20833 1715 7871 8052 32691 32691 LGDALPEEIREPALR 15 0 2 Unmodified _LGDALPEEIREPALR_ 0 0 1 Q53FM2;B2R9C5;Q96IY1;Q5SY74;B4E071 Q53FM2 Q53FM2 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.9815 3 560.308938 1677.90498 83203.68 1.1179 0.00062635 -0.66236 -0.00037113 0.45551 0.00025523 560.642909798844 566.980616422781 84.318 0.63394 84.318 83.996 84.63 0 186 49 6 0 0 0 0.0017007 1 50430 41.378 41.378 1 0.5892 0.6399 0 33015000 23744000 9271200 20834 866 7872 8053 32692 32692 LGDALPEEIREPALR 15 0 2 Unmodified _LGDALPEEIREPALR_ 0 0 1 Q53FM2;B2R9C5;Q96IY1;Q5SY74;B4E071 Q53FM2 Q53FM2 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.3159 3 560.308938 1677.90498 83181.89 0.58729 0.00032907 -0.40228 -0.0002254 0.18501 0.00010366 560.308575185281 566.981105610097 83.149 0.6198 83.149 82.817 83.437 0 170 46 5 0 0 0 0.00010385 2 50906 71.344 71.344 1 0.69032 0.76015 0 21334000 13340000 7993100 20835 866 7872 8053 32693;32694 32694 LGDAVEQGVINNTVLGYFIGR 21 0 1 Unmodified _LGDAVEQGVINNTVLGYFIGR_ 0 0 0 A0A090N8G0;P41250 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1123.6238 2 1118.09204 2234.16953 NaN NaN NaN -0.28645 -0.00032028 NaN NaN NaN NaN 133.39 0.18063 133.39 133.3 133.48 0 0 0 0 6.2157E-75 1 89602 176.75 146.31 1 NaN NaN 0 29653000 0 29653000 20836 457 7873 8054 32695 32695 LGDAVIWGTGQLFQAQQDLLHR 22 0 1 Unmodified _LGDAVIWGTGQLFQAQQDLLHR_ 0 0 0 G3V198;Q12769;E9PR16 G3V198 G3V198 NUP160 Nuclear pore complex protein Nup160 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.1039 3 822.76779 2465.28154 69496.2 0.90216 0.00074227 0.18358 0.00015104 1.0857 0.00089331 823.102502394436 826.438000976689 123.86 0.339 123.86 123.75 124.09 -7.6294E-06 36 23 4 0 0 0 0.00035503 1 80386 34.405 34.405 1 0.9188 0.95973 0 4834200 2445800 2388400 20837 1271 7874 8055 32696 32696 LGDAVIWGTGQLFQAQQDLLHR 22 0 1 Unmodified _LGDAVIWGTGQLFQAQQDLLHR_ 0 0 0 G3V198;Q12769;E9PR16 G3V198 G3V198 NUP160 Nuclear pore complex protein Nup160 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.1023 3 822.76779 2465.28154 NaN NaN NaN 0.91695 0.00075444 NaN NaN NaN NaN 123.94 0.3461 123.94 123.91 124.26 0 0 0 0 6.3638E-06 1 80442 54.672 43.05 1 NaN NaN 0 1558400 1558400 0 20838 1271 7874 8055 32697 32697 LGDDIDLIVR 10 0 1 Unmodified _LGDDIDLIVR_ 0 0 0 O15371;B4E1K8 O15371 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.8207 2 564.816596 1127.61864 NaN NaN NaN 0.5703 0.00032211 NaN NaN NaN NaN 98.484 0.79753 98.484 98.088 98.885 0 0 0 0 0.0040491 1 60103 74.173 57.397 1 NaN NaN 0 16612000 0 16612000 20839 1378 7875 8056 32698 32698 LGDDIDLIVR 10 0 1 Unmodified _LGDDIDLIVR_ 0 0 0 O15371;B4E1K8 O15371 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.8211 2 564.816596 1127.61864 81751.05 0.50517 0.00028533 0.52881 0.00029868 1.034 0.00058401 564.816546801213 569.820681639737 97.628 0.64059 97.628 97.387 98.028 -7.6294E-06 215 50 6 0 0 0 0.004242 1 61024 61.78 50.011 1 2.1007 2.0983 0 11532000 3485000 8046900 20840 1378 7875 8056 32699 32699 LGDFPYVSILDPR 13 0 1 Unmodified _LGDFPYVSILDPR_ 0 0 0 O94888;C9JAT7;B4E126 O94888 O94888 UBXN7 UBX domain-containing protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.3944 2 746.395741 1490.77693 70185.84 1.0478 0.00078208 1.2412 0.00092644 2.289 0.0017085 746.395413984503 751.903362334748 123.19 0.3546 123.19 123.05 123.4 -7.6294E-06 94 28 5 0 0 0 0.0036439 2 79883 49.35 39.397 1 0.9774 1.0185 0 5152900 2366100 2786800 20841 1417 7876 8057 32700;32701 32700 LGDGLFLQCCREVAAR 16 0 2 Unmodified _LGDGLFLQCCREVAAR_ 0 0 1 H7C1W2;E9PF84;O15384;G5E9Q7;D3DWV9;E7EQB8;P51553;Q59GA3;O15385;H0Y5Q7 H7C1W2 H7C1W2 IDH3G;hCG_2004980 Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.9828 3 622.310067 1863.90837 76537.15 0.70378 0.00043797 0.37383 0.00023264 1.0776 0.00067061 622.310128132998 628.982575718792 79.984 0.85648 79.984 79.626 80.483 -7.6294E-06 368 72 7 0 0 0 0.0092401 1 47400 16.996 11.092 1 0.6907 0.75254 0 95302000 52957000 42345000 20842 1199 7877 8058 32702 32702 LGDGLFLQCCREVAAR 16 0 2 Unmodified _LGDGLFLQCCREVAAR_ 0 0 1 H7C1W2;E9PF84;O15384;G5E9Q7;D3DWV9;E7EQB8;P51553;Q59GA3;O15385;H0Y5Q7 H7C1W2 H7C1W2 IDH3G;hCG_2004980 Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.983 3 622.310067 1863.90837 76950.07 0.68014 0.00042326 0.5766 0.00035882 1.2567 0.00078208 622.310453417964 628.982575937312 79.032 0.91019 79.032 78.719 79.629 0 459 76 9 0 0 0 0.0072589 1 47912 17.703 13.602 1 0.69023 0.80783 0 113980000 63359000 50618000 20843 1199 7877 8058 32703 32703 LGDHQSPATPAFK 13 1 0 Unmodified _LGDHQSPATPAFK_ 0 0 0 B7ZLC9;Q8TEQ6 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3594 2 684.848958 1367.68336 NaN NaN NaN 0.68785 0.00047107 NaN NaN NaN NaN 33.586 0.095966 33.586 33.497 33.593 0 0 0 0 0.00010433 1 16849 91.313 65.928 1 NaN NaN 0 5536300 0 5536300 20844 1114 7878 8059 32704 32704 LGDHQSPATPAFK 13 1 0 Unmodified _LGDHQSPATPAFK_ 0 0 0 B7ZLC9;Q8TEQ6 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.8501 2 684.848958 1367.68336 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.623 1 33.623 33.123 34.123 0 0 0 0 0.0036675 1 16887 68.536 55.183 1 20845 1114 7878 8059 32705 32705 LGDLGAIDEK 10 1 0 Unmodified _LGDLGAIDEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.7816 2 515.774396 1029.53424 83115.46 0.35591 0.00018357 -0.087481 -4.5121E-05 0.26843 0.00013845 515.774407822734 519.781277620975 58.739 1.1457 58.739 58.29 59.436 0 494 92 9 0 0 0 1.2241E-05 2 33173 103.55 69.996 1 0.86896 1.0292 0 451180000 242480000 208700000 20846 2070 7879 8060 32706;32707 32706 LGDLGAIDEK 10 1 0 Unmodified _LGDLGAIDEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7821 2 515.774396 1029.53424 84370.33 0.43931 0.00022658 0.0050285 2.5936E-06 0.44433 0.00022918 515.77440541758 519.781341089057 57.737 0.85636 57.737 57.443 58.3 0 385 68 7 0 0 0 1.5031E-06 2 33316 111.61 77.354 1 0.85822 1.0054 0 313870000 167660000 146210000 20847 2070 7879 8060 32708;32709 32708 LGDLGAIDEK 10 1 0 Unmodified _LGDLGAIDEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 519.7822 2 515.774396 1029.53424 82768.7 0.35205 0.00018158 0.096896 4.9977E-05 0.44895 0.00023156 515.774480706636 519.781417253356 67.829 1.7661 67.829 67.382 69.148 0 530 127 8 0 0 0 0.00078086 3 35183 81.338 57.909 1 1.807 1.5006 0 46069000 16655000 29414000 20848 2070 7879 8060 32710;32711;32712 32710 LGDLGAIDEK 10 1 0 Unmodified _LGDLGAIDEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.7813 2 515.774396 1029.53424 83407.98 0.20377 0.0001051 0.16811 8.6708E-05 0.37188 0.00019181 515.774441559816 519.781390686402 68.365 1.2939 68.365 67.862 69.156 0 533 93 8 0 0 0 0.0022162 4 34726 70.1 55.893 1 1.8057 1.5078 0 42784000 15960000 26824000 20849 2070 7879 8060 32713;32714;32715;32716 32713 LGDLVWGK 8 1 0 Unmodified _LGDLVWGK_ 0 0 0 D3DUE6;K7ELL0;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.2602 2 444.252903 886.491253 91655.53 -0.16536 -7.346E-05 0.76627 0.00034042 0.60091 0.00026696 444.253194845983 448.260338090651 76.063 1.2032 76.063 75.557 76.76 0 344 101 5 0 0 0 0.022274 1 45925 57.281 41.127 1 1.2142 1.2311 0 29521000 13991000 15529000 20850 1194;1193;1346 7880 8061 32717 32717 LGDLVWGK 8 1 0 Unmodified _LGDLVWGK_ 0 0 0 D3DUE6;K7ELL0;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 444.253 2 444.252903 886.491253 90723.23 0.076678 3.4065E-05 0.42978 0.00019093 0.50646 0.000225 444.253124179631 448.260094526494 87.508 1.1068 87.508 87.014 88.121 0 249 64 6 0 0 0 0.063127 1 47226 38.962 35.57 1 1.8901 1.5503 0 5111800 1696300 3415500 20851 1194;1193;1346 7880 8061 32718 32718 LGDLYEEEMR 10 0 1 Oxidation (M) _LGDLYEEEM(ox)R_ LGDLYEEEM(1)R LGDLYEEEM(110.76)R 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.7902 2 635.784635 1269.55472 75468.8 0.65677 0.00041756 -0.13162 -8.3682E-05 0.52515 0.00033388 635.784330151151 640.788659125366 47.677 0.4865 47.677 47.304 47.791 0 206 41 6 0 0 0 1.2772E-06 2 25734 110.76 110.76 1 1.771 1.9672 0 71774000 26187000 45588000 20852 1457 7881 8062 32719;32720 32719 1172 LGDLYEEEMR 10 0 1 Oxidation (M) _LGDLYEEEM(ox)R_ LGDLYEEEM(1)R LGDLYEEEM(100.02)R 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.7899 2 635.784635 1269.55472 75783.87 0.67561 0.00042954 -0.06055 -3.8497E-05 0.61506 0.00039105 635.784464197497 640.78876756718 46.626 0.95204 46.626 46.241 47.193 0 344 79 7 0 0 0 8.7827E-06 2 25639 100.02 100.02 1 1.9957 2.2813 0 89012000 26464000 62548000 20853 1457 7881 8062 32721;32722 32721 1172 LGDLYEEEMR 10 0 1 Unmodified _LGDLYEEEMR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.7906 2 627.787178 1253.5598 79726.8 0.45966 0.00028857 -0.095874 -6.0189E-05 0.36379 0.00022838 627.787375027907 632.790996436653 76.415 0.61743 76.415 76.127 76.744 0 152 44 5 0 0 0 0.033773 1 40828 41.283 41.283 1 4.3032 3.6211 0 4511200 957890 3553300 20854 1457 7881 8063 32723 32723 LGDLYEEEMR 10 0 1 Unmodified _LGDLYEEEMR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.7915 2 627.787178 1253.5598 79616.42 0.52116 0.00032718 -0.090934 -5.7087E-05 0.43022 0.00027009 627.787601063736 632.791043656066 76.788 0.66384 76.788 76.562 77.226 0 135 44 5 0 0 0 0.0095663 1 40215 54.539 54.539 1 3.8535 3.4073 0 3927000 937560 2989400 20855 1457 7881 8063 32724 32724 LGDPLEAFPVFK 12 1 0 Unmodified _LGDPLEAFPVFK_ 0 0 0 F2YHM7;A0A024R5C6;Q86UY6;F5H2C9 F2YHM7 F2YHM7 NAA40;NAT11 N-alpha-acetyltransferase 40 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8709 2 666.863546 1331.71254 73627.17 0.70981 0.00047335 1.4546 0.00097005 2.1645 0.0014434 666.863586170393 670.87182011198 122.39 0.42435 122.39 122.21 122.63 7.6294E-06 116 33 5 0 0 0 4.62E-05 1 81221 98.943 59.98 1 1.0563 1.1024 0 10082000 5193100 4888700 20856 177 7882 8064 32725 32725 LGDSHDLQR 9 0 1 Unmodified _LGDSHDLQR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 350.8448 3 347.508834 1039.50467 103484.1 -0.074714 -2.5964E-05 -0.22354 -7.7683E-05 -0.29825 -0.00010365 347.508903623702 350.844712891591 17.904 0.29288 17.904 17.78 18.073 0 38 15 5 0 0 0 0.0099065 1 5037 45.161 30.954 1 1.3554 1.3467 0 8424400 3158900 5265500 20857 523 7883 8065 32726 32726 LGDSHDLQR 9 0 1 Unmodified _LGDSHDLQR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.7628 2 520.759612 1039.50467 NaN NaN NaN -0.63659 -0.00033151 NaN NaN NaN NaN 17.912 0.26748 17.912 17.749 18.017 0 0 0 0 0.00012717 1 5014 97.635 62.34 1 NaN NaN 0 3701900 0 3701900 20858 523 7883 8065 32727 32727 LGDSQLVK 8 1 0 Unmodified _LGDSQLVK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 434.2549 2 430.247818 858.481082 92274.52 -0.19934 -8.5766E-05 -0.0034732 -1.4944E-06 -0.20281 -8.726E-05 430.247669119569 434.255001850271 37.928 1.1578 37.928 37.232 38.389 0 404 91 6 0 0 0 0.011107 1 17092 70.69 2.3779 1 1.1624 0.93019 0 8711600 3685800 5025700 20859 1770 7884 8066 32728 32728 LGDSQLVK 8 1 0 Unmodified _LGDSQLVK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 434.2557 2 430.247818 858.481082 90363.08 -0.43139 -0.00018561 0.43061 0.00018527 -0.0007798 -3.3551E-07 430.247820610257 434.255167380908 37.906 1.2016 37.906 37.257 38.458 0 395 96 6 0 0 0 0.011932 1 16547 68.787 5.4806 1 1.19 0.97058 0 7797200 3265900 4531200 20860 1770 7884 8066 32729 32729 LGEFFQTK 8 1 0 Unmodified _LGEFFQTK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2;K7EP67 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.256 2 485.255643 968.496732 87457.1 0.31439 0.00015256 0.39505 0.0001917 0.70944 0.00034426 485.255716602927 489.262533391656 67.721 0.99548 67.721 67.352 68.347 0 267 84 4 0 0 0 0.0012436 2 39164 110.81 63.065 1 0.93969 0.92529 0 24175000 11931000 12243000 20861 794 7885 8067 32730;32731 32730 LGEHNIDVLEGNEQFINAAK 20 1 0 Unmodified _LGEHNIDVLEGNEQFINAAK_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1106.5576 2 1106.05566 2210.09676 NaN NaN NaN 0.27759 0.00030704 NaN NaN NaN NaN 93.353 0.20317 93.353 93.263 93.467 0 0 0 0 6.9936E-18 2 56604 107.61 95.443 1 NaN NaN 0 26843000 26843000 0 + 20862 1148 7886 8068 32732;32733 32732 LGEHNIDVLEGNEQFINAAK 20 1 0 Unmodified _LGEHNIDVLEGNEQFINAAK_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1106.5571 2 1106.05566 2210.09676 NaN NaN NaN -0.01886 -2.086E-05 NaN NaN NaN NaN 93.634 0.50359 93.634 93.443 93.947 7.6294E-06 0 0 0 2.8667E-32 2 56831 135.02 128.94 1 NaN NaN 0 51944000 51944000 0 + 20863 1148 7886 8068 32734;32735 32734 LGEHNIDVLEGNEQFINAAK 20 1 0 Unmodified _LGEHNIDVLEGNEQFINAAK_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.0416 3 737.706197 2210.09676 NaN NaN NaN 0.48053 0.00035449 NaN NaN NaN NaN 93.627 1.9345 93.627 93.016 94.95 0 0 0 0 9.9503E-19 1 57173 97.384 89.39 1 NaN NaN 0 1338300000 1338300000 0 + 20864 1148 7886 8068 32736 32736 LGEHNIDVLEGNEQFINAAK 20 1 0 Unmodified _LGEHNIDVLEGNEQFINAAK_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.0414 3 737.706197 2210.09676 NaN NaN NaN 0.20661 0.00015242 NaN NaN NaN NaN 92.573 1.8226 92.573 92.017 93.84 0 0 0 0 1.9877E-07 1 57093 60.134 50.603 1 NaN NaN 0 2389000000 2389000000 0 + 20865 1148 7886 8068 32737 32737 LGEHNIDVLEGNEQFINAAK 20 1 0 Unmodified _LGEHNIDVLEGNEQFINAAK_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1106.0588 2 1106.05566 2210.09676 NaN NaN NaN 0.41756 0.00046184 NaN NaN NaN NaN 92.567 0.59261 92.567 92.267 92.86 0 0 0 0 7.702E-18 3 57190 106.52 93.112 1 NaN NaN 0 71802000 71802000 0 + 20866 1148 7886 8068 32738;32739;32740 32738 LGEHNIDVLEGNEQFINAAK 20 1 0 Unmodified _LGEHNIDVLEGNEQFINAAK_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1106.5588 2 1106.05566 2210.09676 NaN NaN NaN -0.10508 -0.00011622 NaN NaN NaN NaN 106.44 0.55637 106.44 106.24 106.8 0 0 0 0 5.2272E-07 1 60794 74.296 69.313 1 NaN NaN 0 22140000 22140000 0 + 20867 1148 7886 8068 32741 32741 LGEHNIDVLEGNEQFINAAK 20 1 0 Unmodified _LGEHNIDVLEGNEQFINAAK_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1106.5598 2 1106.05566 2210.09676 NaN NaN NaN -0.056289 -6.2258E-05 NaN NaN NaN NaN 106.23 0.6585 106.23 106.02 106.67 0 0 0 0 0.0009021 2 59757 48.177 43.179 1 NaN NaN 0 26714000 26714000 0 + 20868 1148 7886 8068 32742;32743 32742 LGEINVIGEPFLNVNCEHIK 20 1 0 Unmodified _LGEINVIGEPFLNVNCEHIK_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RFJ8 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.7384 3 765.731577 2294.1729 70089.9 0.69175 0.00052969 -0.40587 -0.00031079 0.28588 0.0002189 766.065958815928 768.402141847404 112.46 0.42838 112.46 112.24 112.67 -7.6294E-06 109 30 5 0 0 0 1.5159E-06 1 70976 57.496 57.496 1 1.2508 1.3058 0 12195000 6123400 6071800 20869 235 7887 8069 32744 32744 LGEINVIGEPFLNVNCEHIK 20 1 0 Unmodified _LGEINVIGEPFLNVNCEHIK_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RFJ8 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.7319 3 765.731577 2294.1729 69029.89 0.92703 0.00070986 -0.1717 -0.00013148 0.75533 0.00057838 766.066053978634 768.404416730308 111.76 0.39719 111.76 111.52 111.92 -7.6294E-06 127 26 7 0 0 0 1.4567E-06 2 72181 57.989 57.989 1 0.99895 0.99721 0 14239000 7059900 7179500 20870 235 7887 8069 32745;32746 32745 LGEINVIGEPFLNVNCEHIK 20 1 0 Unmodified _LGEINVIGEPFLNVNCEHIK_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RFJ8 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.7318 3 765.731577 2294.1729 69407.3 0.89017 0.00068163 -0.25349 -0.00019411 0.63668 0.00048753 766.06584933486 768.736844458796 123.11 0.40031 123.11 122.93 123.33 -7.6294E-06 80 18 6 0 0 0 0.00053352 2 73521 34.346 34.346 1 0.75865 0.6053 0 6881000 3915000 2966100 20871 235 7887 8069 32747;32748 32747 LGEINVIGEPFLNVNCEHIK 20 1 0 Unmodified _LGEINVIGEPFLNVNCEHIK_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RFJ8 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.7362 3 765.731577 2294.1729 70280.22 1.025 0.00078491 -0.50135 -0.0003839 0.5237 0.00040101 766.065707734611 768.736328324132 122.93 0.36317 122.93 122.77 123.14 7.6294E-06 93 17 8 0 0 0 4.2715E-05 1 72502 41.521 41.521 1 0.8198 0.67393 0 9849800 5760800 4089100 20872 235 7887 8069 32749 32749 LGEIVTTIPTIGFNVETVEYK 21 1 0 Unmodified _LGEIVTTIPTIGFNVETVEYK_ 0 0 0 C9J1Z8;A4D0Z3;B4DLJ3;P84085;B4DEB9;F5H0C7;B4DJC8;P18085;C9JPM4;A0A024R3Q3;A0A024R0Y6;F5H423;P84077;P61204 C9J1Z8;P18085;A0A024R3Q3 P18085 ARF5;ARF3;ARF4;ARF1 ADP-ribosylation factor 5;ADP-ribosylation factor 4;ADP-ribosylation factor 1;ADP-ribosylation factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1166.6357 2 1162.12522 2322.23588 57444.64 0.23279 0.00027054 0.56947 0.0006618 0.80227 0.00093234 1162.12529961766 1166.63429911493 128.77 0.53624 128.77 128.34 128.88 0 194 34 9 0 0 0 0.0019257 1 83746 33.204 33.204 1 2.8786 3.1197 0 44288000 11897000 32391000 20873 1498;660;62 7888 8070 32750 32750 LGEIVTTIPTIGFNVETVEYK 21 1 0 Unmodified _LGEIVTTIPTIGFNVETVEYK_ 0 0 0 C9J1Z8;A4D0Z3;B4DLJ3;P84085;B4DEB9;F5H0C7;B4DJC8;P18085;C9JPM4;A0A024R3Q3;A0A024R0Y6;F5H423;P84077;P61204 C9J1Z8;P18085;A0A024R3Q3 P18085 ARF5;ARF3;ARF4;ARF1 ADP-ribosylation factor 5;ADP-ribosylation factor 4;ADP-ribosylation factor 1;ADP-ribosylation factor 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1166.6354 2 1162.12522 2322.23588 NaN NaN NaN 0.23225 0.0002699 NaN NaN NaN NaN 128.85 0.21027 128.85 128.79 129 0 0 0 0 0.020093 1 84115 31.389 12.977 1 NaN NaN 0 19599000 0 19599000 20874 1498;660;62 7888 8070 32751 32751 LGEIVTTIPTIGFNVETVEYK 21 1 0 Unmodified _LGEIVTTIPTIGFNVETVEYK_ 0 0 0 C9J1Z8;A4D0Z3;B4DLJ3;P84085;B4DEB9;F5H0C7;B4DJC8;P18085;C9JPM4;A0A024R3Q3;A0A024R0Y6;F5H423;P84077;P61204 C9J1Z8;P18085;A0A024R3Q3 P18085 ARF5;ARF3;ARF4;ARF1 ADP-ribosylation factor 5;ADP-ribosylation factor 4;ADP-ribosylation factor 1;ADP-ribosylation factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1162.6274 2 1162.12522 2322.23588 58646.03 -0.065372 -7.597E-05 0.33651 0.00039107 0.27114 0.0003151 1162.62854043725 1166.63558480279 128.43 0.64163 128.43 128.07 128.71 0 213 47 7 0 0 0 0.0016902 3 85682 33.685 33.685 1 3.2412 3.64 0 74993000 20862000 54131000 20875 1498;660;62 7888 8070 32752;32753;32754 32753 LGELLGHPSFQVK 13 1 0 Unmodified _LGELLGHPSFQVK_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.6003 3 475.601393 1423.78235 85441.7 0.46114 0.00021932 -1.184 -0.0005631 -0.72284 -0.00034378 475.600856858781 478.272486137184 80.672 1.3192 80.672 79.897 81.216 0 370 111 6 0 0 0 0.00094275 2 47867 51.211 35.455 1 1.2627 1.3606 0 33846000 15058000 18788000 20876 2007 7889 8071 32755;32756 32755 LGELLGHPSFQVK 13 1 0 Unmodified _LGELLGHPSFQVK_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.601 3 475.601393 1423.78235 86119.83 0.22123 0.00010522 -0.091172 -4.3362E-05 0.13006 6.1856E-05 475.601018090632 478.273362207616 79.237 1.0182 79.237 79.012 80.03 0 319 83 7 0 0 0 3.7813E-05 1 48086 77.644 63.013 1 1.0759 1.195 0 49722000 22059000 27663000 20877 2007 7889 8071 32757 32757 LGELLGHPSFQVK 13 1 0 Unmodified _LGELLGHPSFQVK_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.6013 3 475.601393 1423.78235 NaN NaN NaN -0.92302 -0.00043899 NaN NaN NaN NaN 92.041 0.81533 92.041 91.635 92.45 0 0 0 0 0.035659 1 51111 25.328 17.023 1 NaN NaN 0 3676600 3676600 0 20878 2007 7889 8071 32758 32758 LGELLGHPSFQVK 13 1 0 Unmodified _LGELLGHPSFQVK_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.9357 3 475.601393 1423.78235 NaN NaN NaN -0.71929 -0.0003421 NaN NaN NaN NaN 91.648 0.77492 91.648 91.314 92.089 0 0 0 0 0.038195 1 50073 36.938 28.425 1 NaN NaN 0 4500600 4500600 0 20879 2007 7889 8071 32759 32759 LGEMWSEQSAK 11 1 0 Oxidation (M) _LGEM(ox)WSEQSAK_ LGEM(1)WSEQSAK LGEM(51.44)WSEQSAK 0 1 0 Q5U071;P26583 Q5U071 Q5U071 HMGB2 High mobility group protein B2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.2927 2 641.292627 1280.5707 NaN NaN NaN -0.49147 -0.00031518 NaN NaN NaN NaN 37.154 0.5323 37.154 36.881 37.413 0 0 0 0 0.0080215 1 18747 51.436 38.809 1 NaN NaN 0 7390400 7390400 0 20880 1521 7890 8072 32760 32760 1286 LGEMWSEQSAK 11 1 0 Oxidation (M) _LGEM(ox)WSEQSAK_ LGEM(1)WSEQSAK LGEM(88.5)WSEQSAK 0 1 0 Q5U071;P26583 Q5U071 Q5U071 HMGB2 High mobility group protein B2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.2919 2 641.292627 1280.5707 NaN NaN NaN -0.25024 -0.00016048 NaN NaN NaN NaN 36.486 0.47281 36.486 36.113 36.585 0 0 0 0 0.00022547 1 18547 88.495 73.829 1 NaN NaN 0 10775000 10775000 0 20881 1521 7890 8072 32761 32761 1286 LGESLQSAER 10 0 1 Unmodified _LGESLQSAER_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.2847 2 545.280377 1088.5462 80757.76 0.40656 0.00022169 0.32288 0.00017606 0.72944 0.00039775 545.280381996045 550.284470064027 36.964 1.0121 36.964 36.442 37.454 0 373 86 6 0 0 0 0.0090549 2 16465 55.235 32.705 1 1.1462 0.93646 0 14105000 6519900 7585000 20882 1421 7891 8073 32762;32763 32763 LGESLQSAER 10 0 1 Unmodified _LGESLQSAER_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.2844 2 545.280377 1088.5462 80882.38 0.35491 0.00019352 0.56512 0.00030815 0.92002 0.00050167 545.280374591325 550.28441742773 37.184 1.0749 37.184 36.584 37.659 0 431 89 7 0 0 0 0.00042037 1 16152 87.149 53.886 1 1.1543 0.94889 0 13940000 6292800 7647500 20883 1421 7891 8073 32764 32764 LGEVPYK 7 1 0 Unmodified _LGEVPYK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPJ2;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 407.2334 2 403.226354 804.438155 95744.46 0.0097167 3.918E-06 -0.35048 -0.00014132 -0.34077 -0.00013741 403.226313727152 407.233368553175 43.012 0.64003 43.012 42.704 43.344 0 207 41 8 0 0 0 0.053301 1 20207 53.554 21.441 1 0.88308 0.70475 0 6901800 3797400 3104400 20884 118;1184 7892 8074 32765 32765 LGEWVGLCK 9 1 0 Unmodified _LGEWVGLCK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2836 2 531.276052 1060.53755 82511.42 0.49585 0.00026343 -0.11655 -6.192E-05 0.3793 0.00020151 531.275996003238 535.282936971674 78.807 0.74898 78.807 78.378 79.127 0 312 67 6 0 0 0 0.0014174 2 46582 98.997 86.008 1 1.2703 1.3808 0 47418000 20132000 27286000 20885 1515 7893 8075 32766;32767 32767 LGEWVGLCK 9 1 0 Unmodified _LGEWVGLCK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.2765 2 531.276052 1060.53755 84266.71 0.6337 0.00033667 -0.11806 -6.2723E-05 0.51564 0.00027395 531.276039939758 535.282841289516 77.658 0.79052 77.658 77.321 78.112 0 298 66 7 0 0 0 0.00033612 2 46946 116.25 116.25 1 1.2032 1.3528 0 56240000 24917000 31323000 20886 1515 7893 8075 32768;32769 32769 LGEYGFQNALIVR 13 0 1 Unmodified _LGEYGFQNALIVR_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.4019 2 740.401358 1478.78816 NaN NaN NaN 1.5483 0.0011464 NaN NaN NaN NaN 115.74 0.76836 115.74 115.26 116.03 0 0 0 0 0.00030715 1 66885 87.258 63.407 1 NaN NaN 0 3784000 3784000 0 + 20887 1153 7894 8076 32770 32770 LGFAGLVQEISFGTTK 16 1 0 Unmodified _LGFAGLVQEISFGTTK_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;Q96GI1;B4DX08;B4DZY9 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.9566 2 834.453788 1666.89302 69374.96 1.1322 0.00094478 0.066436 5.5437E-05 1.1986 0.0010002 834.454271679582 838.46081088325 126.72 0.51889 126.72 126.49 127.01 7.6294E-06 190 35 8 0 0 0 6.0377E-12 3 82458 113.22 113.22 1 4.2535 4.4685 0 16514000 2915100 13599000 20888 960 7895 8077 32771;32772;32773 32772 LGFAGLVQEISFGTTK 16 1 0 Unmodified _LGFAGLVQEISFGTTK_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;Q96GI1;B4DX08;B4DZY9 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.455 2 834.453788 1666.89302 67191.05 0.96343 0.00080394 0.28572 0.00023842 1.2492 0.0010424 834.955617921721 838.46091779751 126.32 0.47062 126.32 126.06 126.53 0 166 29 8 0 0 0 3.665E-12 2 84182 117.98 117.98 1 4.4746 4.6542 0 18980000 4277400 14702000 20889 960 7895 8077 32774;32775 32775 LGFATSSDVIEMK 13 1 0 Oxidation (M) _LGFATSSDVIEM(ox)K_ LGFATSSDVIEM(1)K LGFATSSDVIEM(67.93)K 0 1 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.3581 2 707.350142 1412.68573 NaN NaN NaN -1.0945 -0.00077423 NaN NaN NaN NaN 77.374 0.72086 77.374 77.14 77.861 0 0 0 0 0.00084492 1 45643 67.93 57.699 1 NaN NaN 0 6642600 0 6642600 20890 1563 7896 8078 32776 32776 1318 LGFHLPLEVAYQR 13 0 1 Unmodified _LGFHLPLEVAYQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.2885 3 514.952426 1541.83545 NaN NaN NaN -0.1328 -6.8385E-05 NaN NaN NaN NaN 107.9 1.122 107.9 107.4 108.52 0 0 0 0 0.00020434 1 67090 80.245 69.139 1 NaN NaN 0 32099000 0 32099000 20891 1754 7897 8079 32777 32777 LGFHLPLEVAYQR 13 0 1 Unmodified _LGFHLPLEVAYQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.2886 3 514.952426 1541.83545 84222.22 0.63814 0.00032861 -0.27818 -0.00014325 0.35996 0.00018536 514.952264950546 518.288268483558 106.61 1.0394 106.61 106.24 107.27 0 428 75 8 0 0 0 4.2967E-05 1 67990 73.435 73.435 1 1.7866 2.0707 0 66067000 24873000 41194000 20892 1754 7897 8079 32778 32778 LGFHLPLEVAYQR 13 0 1 Unmodified _LGFHLPLEVAYQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.6235 3 514.952426 1541.83545 83350.39 0.60068 0.00030932 -0.036338 -1.8713E-05 0.56434 0.00029061 514.952433178645 518.288267694783 117.67 0.5546 117.67 117.44 118 0 128 24 9 0 0 0 0.00017126 2 69286 61.419 51.093 1 2.4686 2.1057 0 8896200 2603800 6292300 20893 1754 7897 8079 32779;32780 32779 LGFHLPLEVAYQR 13 0 1 Unmodified _LGFHLPLEVAYQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.9523 3 514.952426 1541.83545 83570.33 0.30962 0.00015944 -0.2106 -0.00010845 0.099016 5.0988E-05 514.952354089759 518.287822206495 117.4 0.69862 117.4 117.05 117.75 -7.6294E-06 133 33 8 0 0 0 3.8925E-05 2 68179 78.548 78.548 1 2.2182 1.8159 0 9008400 2710900 6297500 20894 1754 7897 8079 32781;32782 32782 LGFSEVELVQMVVDGVK 17 1 0 Oxidation (M) _LGFSEVELVQM(ox)VVDGVK_ LGFSEVELVQM(1)VVDGVK LGFSEVELVQM(79.47)VVDGVK 0 1 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 936.9977 2 932.989877 1863.9652 NaN NaN NaN 0.19125 0.00017843 NaN NaN NaN NaN 131.61 0.78984 131.61 131.32 132.11 0 0 0 0 2.9879E-06 1 85946 79.466 68.856 1 NaN NaN 0 3947100 0 3947100 20895 557 7898 8080 32783 32783 414 LGFSEVELVQMVVDGVK 17 1 0 Oxidation (M) _LGFSEVELVQM(ox)VVDGVK_ LGFSEVELVQM(1)VVDGVK LGFSEVELVQM(84.36)VVDGVK 0 1 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 936.9972 2 932.989877 1863.9652 NaN NaN NaN -0.60684 -0.00056618 NaN NaN NaN NaN 131.38 0.69963 131.38 130.93 131.63 -1.5259E-05 0 0 0 3.0331E-07 2 87769 84.365 73.755 1 NaN NaN 0 5283600 0 5283600 20896 557 7898 8080 32784;32785 32784 414 LGGAVLSFSEATSSVQK 17 1 0 Unmodified _LGGAVLSFSEATSSVQK_ 0 0 0 Q53SY7;F8VPD4;P27708;H7C2E4 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.4453 2 840.943784 1679.87302 67781.41 1.1084 0.00093211 -0.40141 -0.00033757 0.707 0.00059455 840.943641839485 844.950727592074 93.039 0.57424 93.039 92.742 93.316 0 215 49 7 0 0 0 7.3345E-05 2 56333 96.067 96.067 1 0.83541 0.87323 0 11917000 6484600 5432700 20897 1259 7899 8081 32786;32787 32787 LGGAVLSFSEATSSVQK 17 1 0 Unmodified _LGGAVLSFSEATSSVQK_ 0 0 0 Q53SY7;F8VPD4;P27708;H7C2E4 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.9525 2 840.943784 1679.87302 67955.38 0.79965 0.00067246 -0.54598 -0.00045914 0.25367 0.00021332 841.444605302059 845.451725217905 92.394 0.54053 92.394 92.017 92.558 7.6294E-06 168 45 5 0 0 0 7.4282E-05 2 57074 66.498 66.498 1 0.94655 1.0187 0 22750000 9173900 13576000 20898 1259 7899 8081 32788;32789 32788 LGGEVSCLVAGTK 13 1 0 Unmodified _LGGEVSCLVAGTK_ 0 0 0 A0A0S2Z3L0;P13804;A0A0S2Z3M4;H0YKF0;H0YLU7;J3KN60 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.8475 2 645.839745 1289.66494 NaN NaN NaN -0.25419 -0.00016417 NaN NaN NaN NaN 70.603 0.92511 70.603 70.259 71.184 0 0 0 0 3.5614E-06 1 41044 103.08 71.661 1 NaN NaN 0 10098000 0 10098000 20899 553 7900 8082 32790 32790 LGGEVSCLVAGTK 13 1 0 Unmodified _LGGEVSCLVAGTK_ 0 0 0 A0A0S2Z3L0;P13804;A0A0S2Z3M4;H0YKF0;H0YLU7;J3KN60 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.8466 2 645.839745 1289.66494 NaN NaN NaN -0.73009 -0.00047152 NaN NaN NaN NaN 69.448 0.86829 69.448 69.031 69.899 0 0 0 0 9.2796E-06 1 41273 98.898 78.595 1 NaN NaN 0 10257000 0 10257000 20900 553 7900 8082 32791 32791 LGGFGSK 7 1 0 Unmodified _LGGFGSK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;F5H6N4;Q05CG6 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 337.1914 2 333.184489 664.354425 104175.6 -0.03474 -1.1575E-05 0.038369 1.2784E-05 0.003629 1.2091E-06 333.184450440347 337.191397410631 25.443 0.39948 25.443 25.254 25.654 0 76 21 6 0 0 0 0.043207 1 11033 58.194 22.993 1 0.71442 0.77009 0 41289000 25302000 15987000 20901 515 7901 8083 32792 32792 LGGHGPSFPLK 11 1 0 Unmodified _LGGHGPSFPLK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 370.5414 3 370.541586 1108.60293 98095.03 0.12188 4.5163E-05 0.12825 4.7522E-05 0.25013 9.2685E-05 370.541566599054 373.212951233937 50.731 1.0397 50.731 50.646 51.686 0 344 95 8 0 0 0 0.027081 1 28139 23.226 8.5595 1 0.34162 0.38798 0 162230000 121390000 40838000 20902 1476 7902 8084 32793 32793 LGGHGPSFPLK 11 1 0 Unmodified _LGGHGPSFPLK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.3087 2 555.308741 1108.60293 83571.8 0.21908 0.00012166 0.40923 0.00022725 0.62831 0.0003489 555.308871191461 559.316177404158 50.892 0.42473 50.892 50.831 51.256 0 81 38 4 0 0 0 2.7317E-05 1 28170 102.07 79.575 1 0.29375 0.2956 0 27100000 20438000 6662400 20903 1476 7902 8084 32794 32794 LGGHGPSFPLK 11 1 0 Unmodified _LGGHGPSFPLK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 370.5419 3 370.541586 1108.60293 98387.3 0.41253 0.00015286 -0.019343 -7.1675E-06 0.39318 0.00014569 370.54156939818 373.212890218256 48.385 1.0419 48.385 48.039 49.081 0 472 77 9 0 0 0 0.00042745 3 27443 51.454 44.598 1 0.35515 0.41444 0 267270000 195130000 72135000 20904 1476 7902 8084 32795;32796;32797 32797 LGGHGPSFPLK 11 1 0 Unmodified _LGGHGPSFPLK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.3091 2 555.308741 1108.60293 82171.98 0.45787 0.00025426 0.46065 0.0002558 0.91851 0.00051006 555.308837265297 559.316662335377 57.432 0.74887 57.432 57.246 57.995 0 177 56 5 0 0 0 0.003328 1 29105 60.019 50.108 1 0.28355 0.22433 0 6197400 4474500 1722900 20905 1476 7902 8084 32798 32798 LGGIGQFLAK 10 1 0 Unmodified _LGGIGQFLAK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.3055 2 502.300384 1002.58622 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.138 1 89.138 88.638 89.638 0 0 0 0 0.015402 1 55005 55.531 26.382 1 20906 1691 7903 8085 32799 32799 LGGIGQFLAK 10 1 0 Unmodified _LGGIGQFLAK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.3073 2 502.300384 1002.58622 NaN NaN NaN -0.38374 -0.00019275 NaN NaN NaN NaN 102.4 1.2184 102.4 102.07 103.29 -7.6294E-06 0 0 0 0.011292 1 57951 61.999 36.262 1 NaN NaN 0 8380100 0 8380100 20907 1691 7903 8085 32800 32800 LGGIGQFLAK 10 1 0 Unmodified _LGGIGQFLAK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.3067 2 502.300384 1002.58622 NaN NaN NaN 0.26474 0.00013298 NaN NaN NaN NaN 102.15 1.0985 102.15 101.86 102.96 -7.6294E-06 0 0 0 0.006286 1 56975 67.169 42.247 1 NaN NaN 0 8066700 0 8066700 20908 1691 7903 8085 32801 32801 LGGIPVGVVAVETR 14 0 1 Unmodified _LGGIPVGVVAVETR_ 0 0 0 A0A024R0Y2;B2ZZ90;Q13085;Q7Z5W8;Q59FY4;B4DIG6;B4DIW1;B4DWK9;B4DIR2 A0A024R0Y2 A0A024R0Y2 hCG_30204;ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.9105 2 683.906276 1365.798 78827.71 0.80081 0.00054768 -0.17922 -0.00012257 0.62158 0.0004251 683.906210602769 688.910031556511 101.51 0.42928 101.51 101.29 101.72 0 112 33 5 0 0 0 0.0077958 1 63860 39.785 27.208 1 1.3933 1.3847 0 7478400 3075900 4402500 20909 60 7904 8086 32802 32802 LGGLRPESPESLTSVSR 17 0 2 Unmodified _LGGLRPESPESLTSVSR_ 0 0 1 Q9H6F5;Q6ZW18;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3279 3 595.654885 1783.94283 78406.98 0.49448 0.00029454 -0.10983 -6.5419E-05 0.38465 0.00022912 595.654857762034 602.327128188923 69.61 0.55539 69.61 69.329 69.884 0 184 46 6 0 0 0 7.3081E-05 1 40343 54.004 54.004 1 0.50816 0.55228 0 41742000 25984000 15758000 20910 2037 7905 8087 32803 32803 LGGLTQAPGNPVLAVQINQDK 21 1 0 Unmodified _LGGLTQAPGNPVLAVQINQDK_ 0 0 0 K7ENG2;B5BU25;P26368 K7ENG2 K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1067.5885 2 1067.08676 2132.15897 58915.25 0.41867 0.00044675 0.49728 0.00053065 0.91595 0.0009774 1067.58798392064 1071.59590027303 104.95 0.4107 104.95 104.72 105.13 -7.6294E-06 152 32 7 0 0 0 3.2184E-07 3 64851 60.55 38.495 1 1.4935 1.5161 0 18129000 9097200 9031900 20911 1074 7906 8088 32804;32805;32806 32806 LGGLTQAPGNPVLAVQINQDK 21 1 0 Unmodified _LGGLTQAPGNPVLAVQINQDK_ 0 0 0 K7ENG2;B5BU25;P26368 K7ENG2 K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1067.5861 2 1067.08676 2132.15897 59512.45 0.47957 0.00051175 0.25377 0.0002708 0.73335 0.00078254 1067.08710293388 1071.59564706773 104.27 0.51746 104.27 103.96 104.48 0 157 42 6 0 0 0 1.0758E-07 2 65995 67.115 49.529 1 1.2033 1.2011 0 14895000 7661100 7234200 20912 1074 7906 8088 32807;32808 32807 LGGLTQAPGNPVLAVQINQDK 21 1 0 Unmodified _LGGLTQAPGNPVLAVQINQDK_ 0 0 0 K7ENG2;B5BU25;P26368 K7ENG2 K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1071.0931 2 1067.08676 2132.15897 58778.03 0.027525 2.9372E-05 -0.32029 -0.00034178 -0.29277 -0.00031241 1067.58709708178 1071.09369025181 116.38 0.36543 116.38 116.16 116.53 7.6294E-06 64 15 7 0 0 0 0.0011348 1 68354 34.82 22.655 1 0.75696 0.59749 0 4094800 2151500 1943300 20913 1074 7906 8088 32809 32809 LGGLTQAPGNPVLAVQINQDK 21 1 0 Unmodified _LGGLTQAPGNPVLAVQINQDK_ 0 0 0 K7ENG2;B5BU25;P26368 K7ENG2 K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1067.0879 2 1067.08676 2132.15897 60014.75 0.37948 0.00040494 -0.24445 -0.00026085 0.13503 0.00014409 1067.08619087549 1071.59535529205 116.2 0.32231 116.2 116.04 116.37 0 63 15 5 0 0 0 0.0018956 2 67303 33.265 21.473 1 0.69195 0.56454 0 7891400 4391200 3500200 20914 1074 7906 8088 32810;32811 32810 LGGSAVISLEGKPL 14 1 0 Unmodified _LGGSAVISLEGKPL_ 0 0 1 G3V1A4;V9HWI5;E9PK25;P23528 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.9005 2 670.892835 1339.77112 74309.04 0.97467 0.0006539 0.11432 7.67E-05 1.089 0.0007306 670.89291943888 674.899960411154 98.491 0.79301 98.491 98.213 99.006 0 256 63 6 0 0 0 0.00071038 2 60113 79.86 69.103 1 5.075 5.7347 0 82923000 15089000 67834000 20915 1242 7907 8089 32812;32813 32812 LGGSAVISLEGKPL 14 1 0 Unmodified _LGGSAVISLEGKPL_ 0 0 1 G3V1A4;V9HWI5;E9PK25;P23528 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3945 2 670.892835 1339.77112 75024.84 0.39723 0.0002665 0.31996 0.00021466 0.71719 0.00048116 670.893062111068 674.900061554575 97.805 0.75455 97.805 97.481 98.235 -7.6294E-06 268 61 7 0 0 0 0.00086676 2 61085 74.944 67.971 1 4.911 5.4353 0 45544000 9183700 36360000 20916 1242 7907 8089 32814;32815 32815 LGGSAVISLEGKPL 14 1 0 Unmodified _LGGSAVISLEGKPL_ 0 0 1 G3V1A4;V9HWI5;E9PK25;P23528 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.9005 2 670.892835 1339.77112 75699.16 0.6206 0.00041636 0.32862 0.00022047 0.94923 0.00063683 670.89295774491 674.900085557509 111.48 0.46622 111.48 111.19 111.65 -7.6294E-06 89 24 6 0 0 0 0.043448 1 63592 39.341 31.961 1 4.6914 3.8179 0 6977900 1310400 5667500 20917 1242 7907 8089 32816 32816 LGGSLADSYLDEGFLLDK 18 1 0 Unmodified _LGGSLADSYLDEGFLLDK_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 961.4894 2 956.980563 1911.94657 NaN NaN NaN 1.3809 0.0013215 NaN NaN NaN NaN 121.78 0.67915 121.78 121.34 122.02 0 0 0 0 1.1002E-12 1 78791 98.531 83.969 1 NaN NaN 0 12820000 0 12820000 20918 1255 7908 8090 32817 32817 LGGSLADSYLDEGFLLDK 18 1 0 Unmodified _LGGSLADSYLDEGFLLDK_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 960.9876 2 956.980563 1911.94657 NaN NaN NaN -0.071857 -6.8766E-05 NaN NaN NaN NaN 121.37 0.53176 121.37 121.07 121.6 0 0 0 0 6.3898E-06 1 80401 71.879 57.973 1 NaN NaN 0 12342000 0 12342000 20919 1255 7908 8090 32818 32818 LGGTIDDCELVEGLVLTQK 19 1 0 Unmodified _LGGTIDDCELVEGLVLTQK_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2F4;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1035.0385 2 1030.53264 2059.05072 61888.5 0.56424 0.00058146 -1.4159 -0.0014591 -0.85163 -0.00087763 1031.03392288782 1034.53734239212 119.45 0.28952 119.45 119.29 119.58 0 52 20 4 0 0 0 3.1863E-05 1 78746 55.213 55.213 1 1.2173 1.2141 0 6466900 2394400 4072500 20920 721 7909 8091 32819 32819 LGHELQQAGLK 11 1 0 Unmodified _LGHELQQAGLK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.3358 2 597.335487 1192.65642 79643.3 1.0853 0.00064832 0.062048 3.7063E-05 1.1474 0.00068538 597.335465553409 601.342712483749 31.601 0.33913 31.601 31.397 31.736 -1.9073E-06 81 30 4 0 0 0 7.8974E-05 2 15610 98.044 98.044 1 0.80129 0.8229 0 17818000 11073000 6744400 20921 186;1747 7910 8092 32820;32821 32820 LGHELQQAGLK 11 1 0 Unmodified _LGHELQQAGLK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.3431 2 597.335487 1192.65642 79533.84 0.44805 0.00026763 0.12847 7.6737E-05 0.57651 0.00034437 597.335428071569 601.342691597389 37.33 0.52654 37.33 37.117 37.644 3.8147E-06 129 39 6 0 0 0 0.0060749 1 16763 55.064 55.064 1 1.8214 1.4574 0 2893900 1101600 1792200 20922 186;1747 7910 8092 32822 32822 LGHELQQAGLK 11 1 0 Unmodified _LGHELQQAGLK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.3425 2 597.335487 1192.65642 79376.04 0.4428 0.0002645 -0.12521 -7.4791E-05 0.31759 0.00018971 597.335250473841 601.342517939695 37.096 0.49591 37.096 36.84 37.336 0 140 42 6 0 0 0 0.0004048 1 16172 81.099 81.099 1 1.7375 1.3618 0 3779600 1157500 2622100 20923 186;1747 7910 8092 32823 32823 LGHSFSLVGNK 11 1 0 Unmodified _LGHSFSLVGNK_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 386.8804 3 386.880379 1157.61931 97178.37 0.34288 0.00013265 -0.054764 -2.1187E-05 0.28812 0.00011147 386.8803098048 389.551691138277 45.613 0.45504 45.613 45.402 45.857 0 178 39 6 0 0 0 0.0013295 2 25076 43.419 28.407 1 0.78216 0.82491 0 35334000 18303000 17031000 20924 680 7911 8093 32824;32825 32824 LGHTDILVGVK 11 1 0 Unmodified _LGHTDILVGVK_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 384.5644 3 384.564279 1150.67101 97494.91 0.040112 1.5426E-05 -0.085489 -3.2876E-05 -0.045377 -1.745E-05 384.564178728145 387.235588453803 58.829 0.46358 58.829 58.616 59.079 0 171 37 6 0 0 0 0.0027153 2 33389 50.108 38.376 1 0.9694 1.0043 0 29324000 15790000 13534000 20925 120 7912 8094 32826;32827 32827 LGHTDILVGVK 11 1 0 Unmodified _LGHTDILVGVK_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 384.8983 3 384.564279 1150.67101 97593.44 0.14371 5.5267E-05 0.10897 4.1908E-05 0.25269 9.7175E-05 384.564227678753 387.235814044554 57.113 0.60085 57.113 56.738 57.339 0 187 44 6 0 0 0 0.008646 2 32868 39.873 30.227 1 0.86511 0.91169 0 19873000 9562200 10311000 20926 120 7912 8094 32828;32829 32829 LGIHEDSQNRK 11 1 1 Unmodified _LGIHEDSQNRK_ 0 0 1 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 432.8933 3 432.893347 1295.65821 91255.97 -0.32075 -0.00013885 0.34006 0.00014721 0.019307 8.358E-06 432.893502922991 438.901025533689 15.724 0.55116 15.724 15.594 16.145 -9.5367E-07 177 47 7 0 0 0 0.022369 1 3193 29.299 29.299 1 3.2799 3.6369 0 9554500 2225300 7329200 20927 1348 7913 8095 32830 32830 LGIHEDSTNR 10 0 1 Unmodified _LGIHEDSTNR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 384.5275 3 381.191393 1140.55235 94911.77 5.676E-05 2.1637E-08 -0.2345 -8.9389E-05 -0.23444 -8.9368E-05 381.191362122659 384.52740790098 20.064 0.55999 20.064 19.933 20.493 0 74 19 8 0 0 0 8.7666E-10 2 6538 108.47 79.514 1 2.1536 2.5492 0 359380000 113430000 245950000 20928 379 7914 8096 32831;32832 32831 LGIHEDSTNR 10 0 1 Unmodified _LGIHEDSTNR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.2877 2 571.283451 1140.55235 NaN NaN NaN -0.60972 -0.00034832 NaN NaN NaN NaN 20.064 0.3428 20.064 19.894 20.237 0 0 0 0 1.1533E-39 1 6540 174.92 140.14 1 NaN NaN 0 220410000 0 220410000 20929 379 7914 8096 32833 32833 LGIHEDSTNR 10 0 1 Unmodified _LGIHEDSTNR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 381.1913 3 381.191393 1140.55235 96309.02 -0.12381 -4.7195E-05 -0.087629 -3.3403E-05 -0.21144 -8.0598E-05 381.191431612541 384.52745860397 19.848 0.66132 19.848 19.689 20.35 0 133 25 9 0 0 0 1.1586E-08 2 6159 95.642 84.545 1 2.1325 2.4669 0 268940000 86244000 182690000 20930 379 7914 8096 32834;32835 32835 LGIHEDSTNR 10 0 1 Unmodified _LGIHEDSTNR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.2877 2 571.283451 1140.55235 79341.27 0.29893 0.00017077 -0.70545 -0.00040301 -0.40652 -0.00023224 571.283168511654 576.287455426993 19.853 0.93566 19.853 19.549 20.485 0 113 37 6 0 0 0 1.1584E-51 2 6153 201.21 163.49 1 1.6443 1.9001 0 256150000 97251000 158900000 20931 379 7914 8096 32836;32837 32836 LGIHEDSTNR 10 0 1 Unmodified _LGIHEDSTNR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 384.5275 3 381.191393 1140.55235 95344.77 -0.22294 -8.4985E-05 -0.091664 -3.4941E-05 -0.31461 -0.00011993 381.191391990586 384.527481167887 21.319 0.42576 21.319 21.227 21.653 0 61 14 8 0 0 0 0.0029721 2 6410 46.706 34.129 1 1.3719 1.1561 0 28224000 11313000 16911000 20932 379 7914 8096 32838;32839 32839 LGIHEDSTNR 10 0 1 Unmodified _LGIHEDSTNR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 381.1912 3 381.191393 1140.55235 94335.39 -0.34701 -0.00013228 0.17841 6.801E-05 -0.16859 -6.4267E-05 381.191407688228 384.527536581548 21.15 0.44435 21.15 20.937 21.381 0 121 21 8 0 0 0 0.040989 1 5792 20.204 16.531 1 1.3151 1.0903 0 15088000 6651300 8436400 20933 379 7914 8096 32840 32840 LGIHEDSTNR 10 0 1 Unmodified _LGIHEDSTNR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.2841 2 571.283451 1140.55235 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.076 1 21.076 20.576 21.576 0 0 0 0 0.050522 1 5804 52.49 19.112 1 20934 379 7914 8096 32841 32841 LGIHEDSTNRR 11 0 2 Unmodified _LGIHEDSTNRR_ 0 0 1 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.232 3 433.225097 1296.65346 NaN NaN NaN 0.1661 7.1957E-05 NaN NaN NaN NaN 17.546 0.30049 17.546 17.449 17.749 0 0 0 0 0.03521 2 4693 33.87 24.592 1 NaN NaN 0 10093000 0 10093000 20935 379 7915 8097 32842;32843 32843 LGIHEDSTNRR 11 0 2 Unmodified _LGIHEDSTNRR_ 0 0 1 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.2249 3 433.225097 1296.65346 91412.72 0.41578 0.00018013 0.28348 0.00012281 0.69926 0.00030294 433.225245268082 439.897335116911 17.151 0.47154 17.151 17.014 17.486 0 25 14 3 0 0 0 8.1621E-05 2 4133 73.781 73.781 1 1.9777 1.9553 0 7009800 2658300 4351500 20936 379 7915 8097 32844;32845 32844 LGINDIEGQR 10 0 1 Unmodified _LGINDIEGQR_ 0 0 0 Q68CP9;F8WCU9 Q68CP9 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.7958 2 557.796195 1113.57784 NaN NaN NaN 0.013864 7.7332E-06 NaN NaN NaN NaN 62.802 0.67168 62.802 62.416 63.087 0 0 0 0 0.019613 1 36866 54.722 30.568 1 NaN NaN 0 4120900 4120900 0 20937 1839 7916 8098 32846 32846 LGIPQNTILVQTLLR 15 0 1 Unmodified _LGIPQNTILVQTLLR_ 0 0 0 B3KMB8;A0A024R419;Q9NYY8 B3KMB8 B3KMB8 KIAA0971;FASTKD2 FAST kinase domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.5187 2 840.014347 1678.01414 68799.64 1.1556 0.00097069 -0.43791 -0.00036785 0.71765 0.00060284 840.515344728658 845.01807937168 126.73 0.43223 126.73 126.55 126.99 0 99 29 5 0 0 0 0.00070206 1 82420 51.841 51.841 1 1.1379 1.1882 0 4876100 2012400 2863800 20938 147 7917 8099 32847 32847 LGIPQNTILVQTLLR 15 0 1 Unmodified _LGIPQNTILVQTLLR_ 0 0 0 B3KMB8;A0A024R419;Q9NYY8 B3KMB8 B3KMB8 KIAA0971;FASTKD2 FAST kinase domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.0206 2 840.014347 1678.01414 67918.22 0.92249 0.00077491 0.03537 2.9711E-05 0.95786 0.00080462 840.515261028677 845.520092529392 126.29 0.45736 126.29 126.07 126.53 0 85 28 5 0 0 0 0.00063677 2 84148 53.237 53.237 1 0.99835 1.0036 0 6624200 3160800 3463400 20939 147 7917 8099 32848;32849 32848 LGIQGSYFCSQECFK 15 1 0 Unmodified _LGIQGSYFCSQECFK_ 0 0 0 P53582;H0YAI3 P53582 P53582 METAP1 Methionine aminopeptidase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.4164 2 912.408197 1822.80184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.346 1 90.346 89.846 90.846 7.6294E-06 0 0 0 0.007883 1 55852 50.207 40.92 1 20940 1605 7918 8100 32850 32850 LGIQGSYFCSQECFK 15 1 0 Unmodified _LGIQGSYFCSQECFK_ 0 0 0 P53582;H0YAI3 P53582 P53582 METAP1 Methionine aminopeptidase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 912.9099 2 912.408197 1822.80184 63883 0.31215 0.00028481 -0.3948 -0.00036022 -0.082644 -7.5405E-05 912.407871343633 916.415304008608 104.22 0.49928 104.22 104 104.5 0 199 32 8 0 0 0 0.0005851 1 58398 54.343 54.343 1 0.43992 0.35805 0 7217500 4572500 2645000 20941 1605 7918 8100 32851 32851 LGIQLDFEK 9 1 0 Unmodified _LGIQLDFEK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.7952 2 531.795132 1061.57571 NaN NaN NaN -0.0954 -5.0733E-05 NaN NaN NaN NaN 97.466 0.44783 97.466 97.188 97.636 0 0 0 0 0.0023218 1 59376 81.296 51.111 1 NaN NaN 0 34231000 34231000 0 20942 1739 7919 8101 32852 32852 LGIQLDFEK 9 1 0 Unmodified _LGIQLDFEK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.2971 2 531.795132 1061.57571 86869.41 0.6347 0.00033753 -0.043332 -2.3044E-05 0.59137 0.00031449 531.794983838777 535.802243990838 96.61 0.60059 96.61 96.278 96.878 0 194 51 5 0 0 0 0.017855 1 60250 52.591 34.605 1 0.88766 0.93537 0 19866000 11692000 8174300 20943 1739 7919 8101 32853 32853 LGIQLDFEK 9 1 0 Unmodified _LGIQLDFEK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.8026 2 531.795132 1061.57571 84820.43 0.62005 0.00032974 -0.069508 -3.6964E-05 0.55055 0.00029278 531.795133245786 535.802010105738 110.28 0.42645 110.28 110.12 110.55 0 93 22 6 0 0 0 0.040397 1 63658 41.876 23.89 1 1.1887 0.947 0 2949000 1221400 1727600 20944 1739 7919 8101 32854 32854 LGIQLDFEK 9 1 0 Unmodified _LGIQLDFEK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.7955 2 531.795132 1061.57571 85583.98 0.65253 0.00034701 -0.18906 -0.00010054 0.46347 0.00024647 531.794917261824 535.802104726745 110.16 0.47862 110.16 109.9 110.37 -7.6294E-06 78 25 4 0 0 0 0.010772 2 62644 58.981 33.244 1 1.4261 1.1573 0 2833600 1248500 1585100 20945 1739 7919 8101 32855;32856 32856 LGIQQLK 7 1 0 Unmodified _LGIQQLK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.2554 2 400.255446 798.496338 96231.88 -0.29837 -0.00011943 0.22195 8.8835E-05 -0.076427 -3.059E-05 400.255397119018 404.262630321874 50.416 0.46014 50.416 50.133 50.594 0 139 44 4 0 0 0 0.026863 2 27773 81.1 22.854 1 0.85726 0.84908 0 25842000 12696000 13146000 20946 264 7920 8102 32857;32858 32858 LGISDVAWSSDSNLLVSASDDK 22 1 0 Unmodified _LGISDVAWSSDSNLLVSASDDK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1144.5642 2 1140.05552 2278.09649 56134.73 0.1865 0.00021262 -0.71406 -0.00081406 -0.52756 -0.00060144 1140.55590290915 1144.56390022865 117.96 0.59664 117.96 117.58 118.18 7.6294E-06 117 36 6 0 0 0 0.0046661 1 75514 37.092 25.652 1 0.48885 0.49217 0 9987100 5709600 4277500 20947 1630 7921 8103 32859 32859 LGISDVAWSSDSNLLVSASDDK 22 1 0 Unmodified _LGISDVAWSSDSNLLVSASDDK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1144.0659 2 1140.05552 2278.09649 55759.36 0.31475 0.00035883 -0.66597 -0.00075924 -0.35122 -0.00040041 1140.55545550848 1144.06256906882 117.56 0.54808 117.56 117.22 117.77 -7.6294E-06 106 32 7 0 0 0 0.0045516 1 77064 38.028 31.73 1 0.55918 0.58499 0 10379000 5561300 4817200 20948 1630 7921 8103 32860 32860 LGISFLEDLTDR 12 0 1 Unmodified _LGISFLEDLTDR_ 0 0 0 D6RJE1;D6RE69;D6R9I1;A0A1B0GV48;D6RBC4;B4DYR8;Q8NAP3 D6RJE1 D6RJE1 ZBTB38 Zinc finger and BTB domain-containing protein 38 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.3708 2 689.864274 1377.714 83479.18 0.83499 0.00057603 0.32336 0.00022307 1.1583 0.0007991 689.865051608726 694.868334853537 123.68 0.38847 123.68 123.51 123.9 0 78 26 5 0 0 0 0.013875 1 82153 52.79 32.649 1 1.0807 1.1507 0 3668900 1710200 1958700 20949 632 7922 8104 32861 32861 LGITQLR 7 0 1 Unmodified _LGITQLR_ 0 0 0 Q6IBR2;K7ER00;Q9Y285;K7EPH2 Q6IBR2 Q6IBR2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.7567 2 400.75307 799.491587 NaN NaN NaN 0.16744 6.7102E-05 NaN NaN NaN NaN 57.529 0.43838 57.529 57.243 57.681 0 0 0 0 0.036877 1 32464 64.803 0 1 NaN NaN 0 5481500 0 5481500 20950 1347 7923 8105 32862 32862 LGIYDADGDGDFDVDDAK 18 1 0 Unmodified _LGIYDADGDGDFDVDDAK_ 0 0 0 Q12797;E5RHJ2;E5RHK2;G3XAN5;E5RG29;B7ZM96;B4DQ07;A0A0A0MSK8;Q6PJH4;E5RG56;B3GQE5;B8Y0L3 Q12797 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 950.9096 2 950.907792 1899.80103 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.866 1 93.866 93.366 94.366 -7.6294E-06 0 0 0 9.7835E-05 1 56982 67.964 62.786 1 20951 1700 7924 8106 32863 32863 LGLAPQIQDLYGK 13 1 0 Unmodified _LGLAPQIQDLYGK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;Q6P1N4;H0YKA5;Q5FWG8;Q05DN7 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.4063 2 708.398284 1414.78202 78007.21 0.63176 0.00044754 -0.32105 -0.00022743 0.3107 0.0002201 708.398224862839 712.405318449724 103.94 0.5909 103.94 103.61 104.2 -7.6294E-06 198 47 6 0 0 0 0.008742 1 64076 48.981 39.028 1 1.3138 1.2925 0 8653200 3605800 5047300 20952 352 7925 8107 32864 32864 LGLAPQIQDLYGK 13 1 0 Unmodified _LGLAPQIQDLYGK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;Q6P1N4;H0YKA5;Q5FWG8;Q05DN7 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.399 2 708.398284 1414.78202 75355.41 0.79871 0.00056581 -0.16699 -0.00011829 0.63173 0.00044751 708.398404532183 712.405287730053 103.26 0.50877 103.26 102.95 103.46 -7.6294E-06 152 40 5 0 0 0 0.0017878 2 65311 56.404 45.185 1 1.5237 1.5358 0 13379000 5832400 7546300 20953 352 7925 8107 32865;32866 32866 LGLDYEER 8 0 1 Unmodified _LGLDYEER_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.7498 2 497.745639 993.476725 84802.91 0.090679 4.5135E-05 0.27447 0.00013661 0.36515 0.00018175 497.745689666955 502.749751373632 52.725 1.5255 52.725 52.165 53.691 0 583 115 8 0 0 0 0.0073633 2 29597 83.265 56.663 1 1.4837 1.7491 0 241870000 97317000 144550000 20954 1328 7926 8108 32867;32868 32868 LGLDYEER 8 0 1 Unmodified _LGLDYEER_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.7497 2 497.745639 993.476725 84847.43 0.085089 4.2353E-05 0.21763 0.00010832 0.30272 0.00015068 497.745700148265 502.749721782119 51.535 1.4284 51.535 50.913 52.342 0 564 112 8 0 0 0 0.0036078 2 28959 96.253 56.155 1 1.4473 1.679 0 321700000 132470000 189230000 20955 1328 7926 8108 32869;32870 32869 LGLDYEER 8 0 1 Unmodified _LGLDYEER_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.7495 2 497.745639 993.476725 85072.17 0.17792 8.8558E-05 -0.04929 -2.4534E-05 0.12863 6.4024E-05 497.745523706788 502.749643981439 60.482 0.92109 60.482 59.991 60.912 3.8147E-06 322 75 6 0 0 0 0.060222 1 30765 40.021 28.252 1 2.3722 1.9344 0 15323000 4964600 10358000 20956 1328 7926 8108 32871 32871 LGLDYEER 8 0 1 Unmodified _LGLDYEER_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.7456 2 497.745639 993.476725 85454.74 0.061223 3.0474E-05 0.14356 7.1456E-05 0.20478 0.00010193 497.745638421047 502.749755774549 60.986 0.92955 60.986 60.525 61.454 0 339 79 8 0 0 0 0.044697 1 30530 45.68 29.14 1 2.4007 2.0138 0 16827000 5338400 11489000 20957 1328 7926 8108 32872 32872 LGLEALAANHQQLFTDGR 18 0 1 Unmodified _LGLEALAANHQQLFTDGR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.0086 3 652.009551 1953.00682 77366.41 0.87949 0.00057344 0.42387 0.00027637 1.3034 0.00084981 652.343921533105 655.346251743318 97.503 0.51966 97.503 97.267 97.787 7.6294E-06 146 44 6 0 0 0 0.0019188 1 59518 35.348 26.869 1 1.6078 1.6514 0 19435000 7280900 12154000 20958 1293 7927 8109 32873 32873 LGLEALAANHQQLFTDGR 18 0 1 Unmodified _LGLEALAANHQQLFTDGR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8333 3 652.009551 1953.00682 77002.93 0.87648 0.00057147 0.39004 0.00025431 1.2665 0.00082578 652.343654772204 655.680030762783 96.609 0.5183 96.609 96.267 96.786 7.6294E-06 149 45 5 0 0 0 0.0045265 1 60303 42.095 42.095 1 1.757 1.7494 0 16431000 7842600 8588800 20959 1293 7927 8109 32874 32874 LGLEALAANHQQLFTDGR 18 0 1 Unmodified _LGLEALAANHQQLFTDGR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 652.3437 3 652.009551 1953.00682 74995.08 0.85741 0.00055904 -0.10309 -6.7217E-05 0.75432 0.00049182 652.009254390359 655.679536659085 109.99 0.42079 109.99 109.8 110.22 7.6294E-06 89 21 8 0 0 0 0.023122 1 63526 17.577 13.673 1 0.99851 0.83562 0 3911500 1791200 2120300 20960 1293 7927 8109 32875 32875 LGLEALAANHQQLFTDGR 18 0 1 Unmodified _LGLEALAANHQQLFTDGR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.3452 3 652.009551 1953.00682 75729.39 0.81038 0.00052838 -0.043654 -2.8463E-05 0.76673 0.00049991 652.34372157812 655.679457944848 109.82 0.37061 109.82 109.59 109.96 0 71 18 6 0 0 0 0.050573 1 62477 8.6005 8.6005 1 0.89739 0.76687 0 3253600 1860800 1392800 20961 1293 7927 8109 32876 32876 LGLEFFDQPAVPLAR 15 0 1 Unmodified _LGLEFFDQPAVPLAR_ 0 0 0 A2IDA3;Q1W6H1;P29372 A2IDA3 A2IDA3 MPG DNA-3-methyladenine glycosylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.4578 2 836.956497 1671.89844 66206.09 0.96779 0.00081 0.24093 0.00020165 1.2087 0.0010116 837.458235199196 841.959856967147 124.58 0.6429 124.58 124.28 124.92 7.6294E-06 193 44 7 0 0 0 0.00022114 1 80867 65.5 65.5 1 0.67691 0.70963 0 10986000 6611300 4375000 20962 651 7928 8110 32877 32877 LGLEFFDQPAVPLAR 15 0 1 Unmodified _LGLEFFDQPAVPLAR_ 0 0 0 A2IDA3;Q1W6H1;P29372 A2IDA3 A2IDA3 MPG DNA-3-methyladenine glycosylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.4614 2 836.956497 1671.89844 66703.27 1.0186 0.00085252 0.46978 0.00039319 1.4884 0.0012457 836.956242174828 841.960565079554 124.22 0.48962 124.22 123.93 124.42 0 157 32 7 0 0 0 0.030612 1 82456 27.149 27.149 1 0.7467 0.73655 0 12936000 7353100 5582900 20963 651 7928 8110 32878 32878 LGLEIR 6 0 1 Unmodified _LGLEIR_ 0 0 0 Q9HBM1 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 350.7213 2 350.721239 699.427924 104185.3 -0.037892 -1.329E-05 0.066603 2.3359E-05 0.028711 1.007E-05 350.721281440414 355.72525105439 60.131 0.44493 60.131 59.91 60.355 0 84 28 4 0 0 0 0.03675 1 35104 120.76 5.7452 1 0.91113 0.91586 0 11108000 5909200 5198700 20964 2050 7929 8111 32879 32879 LGLELGK 7 1 0 Unmodified _LGLELGK_ 0 0 0 Q53FW2;P60891;B1ALA7;A0A140VK41;P11908;B2R860;D3YTJ7;A6NMS2 Q53FW2;A0A140VK41 Q53FW2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 369.2359 2 365.228897 728.44324 102156.9 0.20542 7.5024E-05 -0.3994 -0.00014587 -0.19399 -7.0849E-05 365.22869985532 369.235841908198 61.262 0.62229 61.262 61.029 61.651 -3.8147E-06 159 58 4 0 0 0 0.026711 2 35797 76.847 9.8117 1 2.8275 2.8612 0 28994000 6484300 22510000 20965 1626;616 7930 8112 32880;32881 32880 LGLGEGAEEK 10 1 0 Unmodified _LGLGEGAEEK_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.7586 2 501.758746 1001.50294 85731.75 0.2961 0.00014857 -0.04492 -2.2539E-05 0.25118 0.00012603 501.758669418394 505.765719248447 37.972 1.0244 37.972 37.269 38.294 0 446 81 8 0 0 0 0.028805 1 16948 43.282 35.636 1 0.91571 0.71013 0 13902000 7374900 6527200 20966 550 7931 8113 32882 32882 LGLGGNAPVSIPQQSQSVK 19 1 0 Unmodified _LGLGGNAPVSIPQQSQSVK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 940.5161 2 940.515439 1879.01633 63407.68 0.78717 0.00074035 -0.26591 -0.00025009 0.52127 0.00049026 940.515284728174 945.023704565412 84.496 0.55687 84.496 84.271 84.827 0 268 44 8 0 0 0 8.763E-17 2 50625 118.58 118.58 1 0.6991 0.77981 0 62147000 36216000 25931000 20967 878 7932 8114 32883;32884 32884 LGLGGNAPVSIPQQSQSVK 19 1 0 Unmodified _LGLGGNAPVSIPQQSQSVK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 941.0182 2 940.515439 1879.01633 63240.27 0.89981 0.00084629 -0.316 -0.0002972 0.58382 0.00054909 940.515258498778 944.522157652957 83.651 0.64465 83.651 83.342 83.987 0 338 52 8 0 0 0 9.4749E-06 2 51213 74.133 74.133 1 0.71791 0.80938 0 67467000 39523000 27943000 20968 878 7932 8114 32885;32886 32886 LGLGGNAPVSIPQQSQSVK 19 1 0 Unmodified _LGLGGNAPVSIPQQSQSVK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 945.025 2 940.515439 1879.01633 NaN NaN NaN 0.08041 7.5626E-05 NaN NaN NaN NaN 96.916 0.66236 96.916 96.603 97.265 7.6294E-06 0 0 0 8.2763E-07 1 53556 78.401 66.425 1 NaN NaN 0 13410000 0 13410000 20969 878 7932 8114 32887 32887 LGLGLEFQA 9 0 0 Unmodified _LGLGLEFQA_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 948.5231 1 947.519659 946.512382 NaN NaN NaN 0.32925 0.00031197 NaN NaN NaN NaN 120.95 0.86922 120.95 120.6 121.47 0 0 0 0 0.0046471 1 77985 79.809 65.027 1 20970 639 7933 8115 32888 32888 LGLGLEFQA 9 0 0 Unmodified _LGLGLEFQA_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 948.5242 1 947.519659 946.512382 NaN NaN NaN 0.36493 0.00034578 NaN NaN NaN NaN 120.54 0.93562 120.54 120.13 121.07 0 0 0 0 0.024905 1 79551 62.88 47.441 1 20971 639 7933 8115 32889 32889 LGLHVTPSNVDQVSTPPAAK 20 1 0 Unmodified _LGLHVTPSNVDQVSTPPAAK_ 0 0 0 D3DS96;Q9NRL2;B3KND8 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.3732 3 677.700494 2030.07965 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.644 1 72.644 72.144 73.144 0 0 0 0 2.4217E-06 1 43593 79.88 69.921 1 20972 1187 7934 8116 32890 32890 LGLIPIHADPR 11 0 1 Unmodified _LGLIPIHADPR_ 0 0 0 Q96HT3;O15160;D6RDJ3;H0Y723;B4DEC2;E7EQB9 Q96HT3 Q96HT3 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.2401 3 401.239907 1200.69789 96137.34 0.21152 8.4872E-05 -0.26599 -0.00010673 -0.054465 -2.1854E-05 401.239751340666 404.575861553375 77.333 0.49175 77.333 77.092 77.584 0 146 39 6 0 0 0 0.041187 1 46698 23.749 7.8596 1 1.0016 0.99371 0 15925000 9133700 6791400 20973 1376 7935 8117 32891 32891 LGLIPLISDDIVDK 14 1 0 Unmodified _LGLIPLISDDIVDK_ 0 0 0 B7Z377;Q6FGR6;B7Z6D1;P19387 B7Z377 B7Z377 POLR2C DNA-directed RNA polymerase II subunit RPB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.946 2 755.939982 1509.86541 71037.33 0.72699 0.00054956 0.0040674 3.0747E-06 0.73105 0.00055263 755.940332421397 759.946674761724 129.58 0.28551 129.58 129.42 129.71 0 92 18 6 0 0 0 0.00014072 2 84381 78.342 78.342 1 0.98062 0.96085 0 21414000 10827000 10587000 20974 1087 7936 8118 32892;32893 32892 LGLIPLISDDIVDK 14 1 0 Unmodified _LGLIPLISDDIVDK_ 0 0 0 B7Z377;Q6FGR6;B7Z6D1;P19387 B7Z377 B7Z377 POLR2C DNA-directed RNA polymerase II subunit RPB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.9468 2 755.939982 1509.86541 70195.83 0.87799 0.00066371 -0.25935 -0.00019605 0.61864 0.00046766 755.940179512584 759.946417376557 129.14 0.28891 129.14 129 129.29 0 95 20 7 0 0 0 7.9447E-05 2 86199 88.596 88.596 1 1.0757 1.1254 0 24216000 11189000 13027000 20975 1087 7936 8118 32894;32895 32894 LGLLDNHSSEFNVTR 15 0 1 Unmodified _LGLLDNHSSEFNVTR_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;A4VCH6;K7ER27;K7ER56 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.2928 3 567.956676 1700.8482 81289.59 0.71229 0.00040455 -0.58332 -0.0003313 0.12897 7.3249E-05 567.956080804442 571.292490558278 80.961 0.73543 80.961 80.623 81.358 -7.6294E-06 246 62 5 0 0 0 3.6285E-13 1 48329 113.59 113.59 1 3.5044 3.6138 0 24308000 7687900 16620000 20976 946 7937 8119 32896 32896 LGLLDNHSSEFNVTR 15 0 1 Unmodified _LGLLDNHSSEFNVTR_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;A4VCH6;K7ER27;K7ER56 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.293 3 567.956676 1700.8482 80811.97 0.38755 0.00022011 0.13505 7.6702E-05 0.5226 0.00029682 567.956537662896 571.292590883499 91.764 0.43033 91.764 91.582 92.012 7.6294E-06 110 25 6 0 0 0 0.023524 1 50233 34.432 34.432 1 1.8801 1.6994 0 2124300 701280 1423100 20977 946 7937 8119 32897 32897 LGLLDTQTSQVLTAVDK 17 1 0 Unmodified _LGLLDTQTSQVLTAVDK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.4838 2 901.498923 1800.98329 68039.7 0.69715 0.00062848 -0.28544 -0.00025732 0.41171 0.00037116 901.998972851634 906.007770324542 112.7 0.42505 112.7 112.53 112.95 0 141 28 8 0 0 0 6.1943E-11 1 73061 90.759 90.759 1 1.6628 1.8001 0 22060000 7835200 14224000 20978 397;1622 7938 8120 32898 32898 LGLLDTQTSQVLTAVDK 17 1 0 Unmodified _LGLLDTQTSQVLTAVDK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 905.5067 2 901.498923 1800.98329 65279.89 0.42695 0.0003849 -0.31849 -0.00028711 0.10847 9.7781E-05 901.497755757012 905.506027487313 124.36 0.44212 124.36 124.15 124.59 7.6294E-06 69 18 6 0 0 0 7.052E-05 1 73623 69.716 69.716 1 3.8371 3.1496 0 9169700 2511800 6657900 20979 397;1622 7938 8120 32899 32899 LGLLGGK 7 1 0 Unmodified _LGLLGGK_ 0 0 0 Q12873;H7C2H0;I3L1I4 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 329.2184 2 329.218332 656.422111 109015.2 -0.056789 -1.8696E-05 -0.0096196 -3.1669E-06 -0.066408 -2.1863E-05 329.218271080386 333.225371077647 51.667 0.51805 51.667 51.315 51.833 0 112 41 4 0 0 0 0.040128 1 29303 59.609 3.3546 1 0.54217 0.55621 0 17712000 11184000 6528700 20980 1701 7939 8121 32900 32900 LGLLGLPAPK 10 1 0 Unmodified _LGLLGLPAPK_ 0 0 0 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.3232 2 489.820953 977.627353 87529.77 0.39349 0.00019274 -0.17866 -8.7512E-05 0.21483 0.00010523 489.820724455226 493.828004801594 104.43 0.63528 104.43 104.07 104.71 0 167 52 4 0 0 0 0.010576 1 64442 53.166 43.18 1 0.96231 0.97321 0 10135000 5647800 4487400 20981 957 7940 8122 32901 32901 LGLLGLPAPK 10 1 0 Unmodified _LGLLGLPAPK_ 0 0 0 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.8206 2 489.820953 977.627353 87963.7 -0.12987 -6.3615E-05 0.37516 0.00018376 0.24528 0.00012015 489.820877452832 493.828255304089 103.54 0.62209 103.54 103.24 103.86 0 175 52 4 0 0 0 0.015683 1 65412 48.561 38.574 1 0.98416 0.99738 0 12942000 6787100 6155200 20982 957 7940 8122 32902 32902 LGLNLPAGR 9 0 1 Unmodified _LGLNLPAGR_ 0 0 0 Q7Z6R9 Q7Z6R9 Q7Z6R9 TFAP2D Transcription factor AP-2-delta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.7769 2 455.777077 909.5396 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.844 1 71.844 71.344 72.344 0 0 0 0 0.002389 1 41962 85.272 0 1 20983 1881 7941 8123 32903 32903 LGLNLPAGR 9 0 1 Unmodified _LGLNLPAGR_ 0 0 0 Q7Z6R9 Q7Z6R9 Q7Z6R9 TFAP2D Transcription factor AP-2-delta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.7772 2 455.777077 909.5396 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.597 1 70.597 70.097 71.097 0 0 0 0 0.013047 1 42183 60.709 0 1 20984 1881 7941 8123 32904 32904 LGLNLPAGR 9 0 1 Unmodified _LGLNLPAGR_ 0 0 0 Q7Z6R9 Q7Z6R9 Q7Z6R9 TFAP2D Transcription factor AP-2-delta MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 455.7773 2 455.777077 909.5396 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.916 1 81.916 81.416 82.416 0 0 0 0 0.0015956 1 43641 91.906 0 1 20985 1881 7941 8123 32905 32905 LGLPGIPR 8 0 1 Unmodified _LGLPGIPR_ 0 0 0 H0YE88;P28347;E9PKB7;H0YEJ9;Q59EF3 H0YE88 H0YE88 TEAD1 Transcriptional enhancer factor TEF-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.7629 2 411.763438 821.512323 95981.95 0.17711 7.2929E-05 -0.40652 -0.00016739 -0.22941 -9.4461E-05 411.763291634804 416.767401724729 84.465 0.45448 84.465 84.269 84.724 0 112 37 4 0 0 0 0.0077998 3 51806 81.381 38.315 1 0.58605 0.57599 0 13547000 8111800 5434900 20986 1291 7942 8124 32906;32907;32908 32906 LGLPPLTPEQQEALQK 16 1 0 Unmodified _LGLPPLTPEQQEALQK_ 0 0 0 A0A0J9YYL3;A0A0J9YXJ8;A0A0J9YVP6;A0A0J9YXX5;Q9UHX1;E9PL19;E9PMU7;E9PN18;A0A0J9YVR6;E9PQ56;A0A0J9YWM1;H0YEM1 A0A0J9YYL3 A0A0J9YYL3 PUF60 Poly(U)-binding-splicing factor PUF60 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.4968 2 881.490901 1760.96725 NaN NaN NaN 0.053275 4.6962E-05 NaN NaN NaN NaN 99.103 0.50119 99.103 98.751 99.252 -7.6294E-06 0 0 0 0.005972 1 61942 52.693 43.738 1 NaN NaN 0 9778700 0 9778700 20987 537 7943 8125 32909 32909 LGLQSLR 7 0 1 Unmodified _LGLQSLR_ 0 0 0 P18085;C9JAK5;U3KQF2 P18085 P18085 ARF4 ADP-ribosylation factor 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.7451 2 393.745245 785.475937 95248.92 0.14813 5.8324E-05 0.16113 6.3446E-05 0.30926 0.00012177 393.745146274753 398.749346005522 57.71 0.74068 57.71 57.418 58.159 -3.8147E-06 218 59 6 0 0 0 0.014426 2 32606 100.07 40.425 1 2.1736 2.3966 0 55274000 16718000 38556000 20988 1498 7944 8126 32910;32911 32910 LGLQSLR 7 0 1 Unmodified _LGLQSLR_ 0 0 0 P18085;C9JAK5;U3KQF2 P18085 P18085 ARF4 ADP-ribosylation factor 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.7449 2 393.745245 785.475937 96545.56 0.31827 0.00012532 -0.1921 -7.5639E-05 0.12617 4.9677E-05 393.745056397827 398.749198614468 56.57 0.87179 56.57 56.299 57.171 0 221 62 6 0 0 0 0.011851 2 32561 107.22 32.625 1 2.114 2.4564 0 59483000 18665000 40818000 20989 1498 7944 8126 32912;32913 32913 LGLQSLR 7 0 1 Unmodified _LGLQSLR_ 0 0 0 P18085;C9JAK5;U3KQF2 P18085 P18085 ARF4 ADP-ribosylation factor 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 398.7494 2 393.745245 785.475937 97179.9 -0.044999 -1.7718E-05 0.054706 2.154E-05 0.0097075 3.8223E-06 393.74514905013 398.749342169652 66.933 0.76112 66.933 66.597 67.358 0 133 42 4 0 0 0 0.053301 1 33989 53.554 5.3807 1 1.4511 1.2975 0 2309000 923720 1385200 20990 1498 7944 8126 32914 32914 LGLTEIR 7 0 1 Unmodified _LGLTEIR_ 0 0 0 B4DWW8;E7EVX8;Q8WWY3 B4DWW8 B4DWW8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 406.2497 2 401.245078 800.475603 NaN NaN NaN 0.93401 0.00037477 NaN NaN NaN NaN 61.038 0.43693 61.038 60.858 61.295 3.8147E-06 0 0 0 0.031419 1 34811 70.912 16.387 1 NaN NaN 0 3829300 0 3829300 20991 1046 7945 8127 32915 32915 LGLTEIR 7 0 1 Unmodified _LGLTEIR_ 0 0 0 B4DWW8;E7EVX8;Q8WWY3 B4DWW8 B4DWW8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.2454 2 401.245078 800.475603 96282.64 0.18318 7.3502E-05 0.47162 0.00018923 0.6548 0.00026274 401.244907739485 406.249371972607 59.748 0.38708 59.748 59.609 59.996 0 97 33 4 0 0 0 0.026953 2 34789 83.614 16.621 1 1.4161 1.427 0 10622000 4357500 6264500 20992 1046 7945 8127 32916;32917 32916 LGLVGVNLTLDGVK 14 1 0 Unmodified _LGLVGVNLTLDGVK_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;K7ESG8 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.4208 2 699.421759 1396.82897 73977.43 0.75533 0.0005283 -0.094139 -6.5843E-05 0.6612 0.00046245 699.420660028185 703.42888124484 117.58 0.56752 117.58 117.31 117.87 0 168 37 7 0 0 0 0.0015233 3 75311 53.08 53.08 1 1.2806 1.335 0 16815000 7309100 9505500 20993 89 7946 8128 32918;32919;32920 32919 LGLVGVNLTLDGVK 14 1 0 Unmodified _LGLVGVNLTLDGVK_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;K7ESG8 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.4296 2 699.421759 1396.82897 74016.5 0.80135 0.00056048 -0.21342 -0.00014927 0.58793 0.00041121 699.4205391101 703.428905853029 117.11 0.59095 117.11 116.75 117.34 -7.6294E-06 117 32 6 0 0 0 4.0499E-06 1 76703 100.72 91.289 1 1.3844 1.4891 0 37651000 15233000 22418000 20994 89 7946 8128 32921 32921 LGLVIPSSGSGSGNQSIDR 19 0 1 Unmodified _LGLVIPSSGSGSGNQSIDR_ 0 0 0 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 927.9845 2 922.479054 1842.94355 NaN NaN NaN 0.31614 0.00029163 NaN NaN NaN NaN 85.319 0.20233 85.319 85.211 85.413 0 0 0 0 0.030484 1 51261 32.567 23.245 1 NaN NaN 0 5547200 0 5547200 20995 2109 7947 8129 32922 32922 LGLVIPSSGSGSGNQSIDR 19 0 1 Unmodified _LGLVIPSSGSGSGNQSIDR_ 0 0 0 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 927.9843 2 922.479054 1842.94355 NaN NaN NaN -0.020242 -1.8673E-05 NaN NaN NaN NaN 84.355 0.16917 84.355 84.308 84.477 7.6294E-06 0 0 0 0.00011978 1 51838 64.121 39.268 1 NaN NaN 0 4877800 0 4877800 20996 2109 7947 8129 32923 32923 LGLVIPSSGSGSGNQSIDR 19 0 1 Unmodified _LGLVIPSSGSGSGNQSIDR_ 0 0 0 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 922.4816 2 922.479054 1842.94355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.261 1 84.261 83.761 84.761 -7.6294E-06 0 0 0 0.052191 1 51725 37.426 20.483 1 20997 2109 7947 8129 32924 32924 LGLVIPSSGSGSGNQSIDR 19 0 1 Unmodified _LGLVIPSSGSGSGNQSIDR_ 0 0 0 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 922.9817 2 922.479054 1842.94355 63739.71 0.64184 0.00059209 -0.045573 -4.204E-05 0.59627 0.00055005 922.47945361532 927.482719023328 97.7 0.45892 97.7 97.493 97.951 0 143 31 6 0 0 0 0.049249 1 55131 21.251 21.251 1 1.0076 0.84169 0 3303900 1718900 1585000 20998 2109 7947 8129 32925 32925 LGLVIPSSGSGSGNQSIDR 19 0 1 Unmodified _LGLVIPSSGSGSGNQSIDR_ 0 0 0 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 922.985 2 922.479054 1842.94355 63014.55 0.32218 0.0002972 0.58144 0.00053637 0.90362 0.00083357 922.480025337338 927.483598687517 97.554 0.49734 97.554 97.284 97.782 0 120 26 6 0 0 0 0.009348 2 54066 26.969 26.969 1 1.0545 0.89555 0 3106900 1448800 1658100 20999 2109 7947 8129 32926;32927 32926 LGMLSHLMR 9 0 1 2 Oxidation (M) _LGM(ox)LSHLM(ox)R_ LGM(1)LSHLM(1)R LGM(48.76)LSHLM(48.76)R 0 2 0 REV__A6NES4 REV__A6NES4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.2852 2 545.280812 1088.54707 78730.34 0.97856 0.00053359 1.3247 0.00072234 2.3033 0.0012559 545.280372821231 550.284468618747 32.083 0.71565 32.083 31.819 32.535 0 384 66 9 0 0 0 0.027709 1 15758 48.756 48.756 1 0.69548 0.77139 0 67227000 40506000 26721000 + 21000 2163 7948 8130 32928 32928 2007;2008 LGMLSHLMR 9 0 1 2 Oxidation (M) _LGM(ox)LSHLM(ox)R_ LGM(1)LSHLM(1)R LGM(48.76)LSHLM(48.76)R 0 2 0 REV__A6NES4 REV__A6NES4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.2852 2 545.280812 1088.54707 78730.34 0.97856 0.00053359 1.3247 0.00072234 2.3033 0.0012559 545.280372821231 550.284468618747 32.083 0.71565 32.083 31.819 32.535 0 384 66 9 0 0 0 0.021494 1 15758 48.756 48.756 1 0.69548 0.77139 0 67227000 40506000 26721000 + 21001 2163 7948 8130 32929 32929 2007;2008 LGMLSHLMR 9 0 1 2 Oxidation (M) _LGM(ox)LSHLM(ox)R_ LGM(1)LSHLM(1)R LGM(52.64)LSHLM(52.64)R 0 2 0 REV__A6NES4 REV__A6NES4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.2798 2 545.280812 1088.54707 78709.13 0.65783 0.0003587 0.78695 0.00042911 1.4448 0.00078781 545.280343160702 550.284433252712 31.364 0.75509 31.364 31.147 31.902 0 330 67 7 0 0 0 0.021262 2 15417 52.636 52.636 1 0.68482 0.79116 0 55921000 33026000 22895000 + 21002 2163 7948 8130 32930;32931 32930 2007;2008 LGNDFHTNK 9 1 0 Unmodified _LGNDFHTNK_ 0 0 0 H0YN88;A0A075B716;P08708;H0YN73;H3BNC9 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 349.1736 3 349.173562 1044.49886 103128.5 -0.33188 -0.00011588 0.20154 7.0373E-05 -0.13034 -4.5511E-05 349.173627394274 351.844980877802 18.655 0.58881 18.655 18.507 19.096 0 129 38 6 0 0 0 0.0040863 2 5536 47.187 43.139 1 1.1129 1.2585 0 103790000 47976000 55814000 21003 396 7949 8131 32932;32933 32933 LGNDFHTNK 9 1 0 Unmodified _LGNDFHTNK_ 0 0 0 H0YN88;A0A075B716;P08708;H0YN73;H3BNC9 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.2574 2 523.256705 1044.49886 82505.71 -0.11678 -6.1107E-05 0.50431 0.00026389 0.38753 0.00020278 523.256950333759 527.264007745305 18.673 0.38505 18.673 18.507 18.892 0 97 22 6 0 0 0 1.2197E-34 1 5537 197.81 176.06 1 1.1141 1.2275 0 55569000 27006000 28563000 21004 396 7949 8131 32934 32934 LGNDFHTNK 9 1 0 Unmodified _LGNDFHTNK_ 0 0 0 H0YN88;A0A075B716;P08708;H0YN73;H3BNC9 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.264 2 523.256705 1044.49886 82635.1 0.38374 0.00020079 0.12847 6.7221E-05 0.51221 0.00026802 523.256637799238 527.263841064567 18.724 0.53985 18.724 18.435 18.975 0 138 34 6 0 0 0 1.7956E-12 1 5318 161.79 142.15 1 1.0099 1.0856 0 37548000 18048000 19500000 21005 396 7949 8131 32935 32935 LGNDFHTNK 9 1 0 Unmodified _LGNDFHTNK_ 0 0 0 H0YN88;A0A075B716;P08708;H0YN73;H3BNC9 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 351.8448 3 349.173562 1044.49886 102859.7 0.075509 2.6366E-05 -0.10993 -3.8384E-05 -0.034418 -1.2018E-05 349.173492884559 351.844872141468 18.727 0.61556 18.727 18.435 19.051 0 180 40 7 0 0 0 0.0068791 2 5332 40.994 28.706 1 0.95234 1.0359 0 39572000 20007000 19564000 21006 396 7949 8131 32936;32937 32936 LGNGINIIVATPGR 14 0 1 Unmodified _LGNGINIIVATPGR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.9097 2 697.90935 1393.80415 73245.34 0.76156 0.0005315 -0.12876 -8.9864E-05 0.63279 0.00044163 697.909047337862 702.913529474792 95.59 0.91376 95.59 95.183 96.097 0 408 73 8 0 0 0 1.4794E-16 2 58106 137.89 137.89 1 0.92134 1.0506 0 119480000 58858000 60624000 21007 303 7950 8132 32938;32939 32938 LGNGINIIVATPGR 14 0 1 Unmodified _LGNGINIIVATPGR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.9093 2 697.90935 1393.80415 73237.13 0.7404 0.00051673 -0.28731 -0.00020052 0.45309 0.00031621 697.909035690563 702.913320339939 94.909 1.0876 94.909 94.352 95.44 0 430 77 8 0 0 0 2.5389E-57 2 58910 194.17 194.17 1 0.98926 1.1365 0 194410000 102580000 91831000 21008 303 7950 8132 32940;32941 32941 LGNGINIIVATPGR 14 0 1 Unmodified _LGNGINIIVATPGR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.9145 2 697.90935 1393.80415 72370.33 0.73087 0.00051008 -0.013559 -9.4626E-06 0.71731 0.00050062 697.909317277761 702.913448864848 108.82 1.0635 108.82 108.4 109.46 0 231 48 9 0 0 0 1.4051E-14 2 62501 133.42 133.42 1 1.4708 1.2436 0 30429000 12150000 18279000 21009 303 7950 8132 32942;32943 32943 LGNGINIIVATPGR 14 0 1 Unmodified _LGNGINIIVATPGR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.9138 2 697.90935 1393.80415 72472.69 0.58893 0.00041102 -0.023365 -1.6306E-05 0.56556 0.00039471 697.90921317701 702.913478471258 108.64 1.0083 108.64 108.31 109.32 7.6294E-06 247 43 9 0 0 0 0.0001619 2 61461 74.76 74.76 1 1.6041 1.3992 0 35587000 13531000 22056000 21010 303 7950 8132 32944;32945 32944 LGNLFLNEDLEVK 13 1 0 Unmodified _LGNLFLNEDLEVK_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;Q58A51 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.9138 2 752.406306 1502.79806 70165.55 1.1288 0.00084932 -0.38699 -0.00029118 0.74181 0.00055814 752.40561672191 756.413325523098 110.44 0.58279 110.44 110.14 110.72 0 219 37 8 0 0 0 0.0010174 1 69219 59.542 9.2582 1 0.74059 0.84646 0 182750000 108170000 74578000 21011 1604 7951 8133 32946 32946 LGNNCVFAPADVTSEK 16 1 0 Unmodified _LGNNCVFAPADVTSEK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.9213 2 861.411794 1720.80903 64858.34 0.64196 0.00055299 -0.66057 -0.00056902 -0.01861 -1.6031E-05 861.411641020348 865.418149317191 76.818 0.60512 76.818 76.465 77.07 -7.6294E-06 278 51 8 0 0 0 1.0638E-06 2 45237 96.745 96.745 1 1.9282 2.0744 0 38565000 13320000 25245000 21012 555 7952 8134 32947;32948 32948 LGNNCVFAPADVTSEK 16 1 0 Unmodified _LGNNCVFAPADVTSEK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.4114 2 861.411794 1720.80903 65152.66 0.54204 0.00046692 -0.61376 -0.0005287 -0.071724 -6.1784E-05 861.41164724161 865.418057914955 75.872 0.60461 75.872 75.503 76.107 0 265 55 8 0 0 0 5.0005E-05 1 45650 83.617 83.617 1 2.012 2.2648 0 56860000 20652000 36208000 21013 555 7952 8134 32949 32949 LGNNCVFAPADVTSEK 16 1 0 Unmodified _LGNNCVFAPADVTSEK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 865.4201 2 861.411794 1720.80903 64806.3 0.41619 0.00035851 -0.39298 -0.00033852 0.023209 1.9993E-05 861.411649834996 865.418551691343 87.894 0.51889 87.894 87.618 88.137 0 171 31 9 0 0 0 0.0018097 1 47547 43.594 43.594 1 1.2662 1.0355 0 4784400 1828800 2955600 21014 555 7952 8134 32950 32950 LGNPIVPLNIR 11 0 1 Unmodified _LGNPIVPLNIR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.3732 2 603.371872 1204.72919 79309.74 0.41675 0.00025146 0.43719 0.00026379 0.85395 0.00051525 603.37204113883 608.376227793301 102.66 0.78792 102.66 102.32 103.1 7.6294E-06 372 67 8 0 0 0 0.00018556 2 63082 93.429 90.904 1 0.61279 0.68246 0 80731000 48350000 32381000 21015 1665 7953 8135 32951;32952 32951 LGNPIVPLNIR 11 0 1 Unmodified _LGNPIVPLNIR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.3763 2 603.371872 1204.72919 79153.41 0.37176 0.00022431 0.4378 0.00026416 0.80957 0.00048847 603.372046855923 608.376258526907 101.95 0.81059 101.95 101.51 102.32 0 344 62 8 0 0 0 0.00022194 2 64149 91.853 82.148 1 0.61151 0.69554 0 124020000 80552000 43464000 21016 1665 7953 8135 32953;32954 32954 LGNPIVPLNIR 11 0 1 Unmodified _LGNPIVPLNIR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.3726 2 603.371872 1204.72919 78441.84 0.76198 0.00045976 0.14592 8.8046E-05 0.9079 0.0005478 603.371894361366 608.376074800043 114.83 0.66402 114.83 114.55 115.21 7.6294E-06 157 30 9 0 0 0 0.00027172 2 67100 89.698 89.698 1 0.31786 0.26861 0 30018000 23254000 6763500 21017 1665 7953 8135 32955;32956 32955 LGNPIVPLNIR 11 0 1 Unmodified _LGNPIVPLNIR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.3723 2 603.371872 1204.72919 77475.1 0.69526 0.0004195 0.10682 6.4454E-05 0.80208 0.00048395 603.371867281248 608.376063600704 114.56 0.59899 114.56 114.33 114.93 0 148 26 9 0 0 0 1.7121E-05 2 66036 106.04 101.54 1 0.32173 0.28065 0 29835000 22115000 7720300 21018 1665 7953 8135 32957;32958 32957 LGNSCEFR 8 0 1 Unmodified _LGNSCEFR_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.7299 2 491.724184 981.433814 86977.53 0.30631 0.00015062 0.21932 0.00010785 0.52563 0.00025846 491.724474202865 496.728666747327 26.878 0.55331 26.878 26.656 27.209 0 143 33 7 0 0 0 0.014196 1 12199 63.565 52.741 1 5.2364 5.3553 0 31581000 4479600 27101000 21019 5 7954 8136 32959 32959 LGNSCEFR 8 0 1 Unmodified _LGNSCEFR_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.7285 2 491.724184 981.433814 87106.32 0.25056 0.00012321 0.43893 0.00021583 0.68949 0.00033904 491.724326938351 496.72872009115 26.517 0.46504 26.517 26.28 26.745 -1.9073E-06 123 25 8 0 0 0 0.022631 1 11905 57.047 47.833 1 4.9975 5.6328 0 46697000 6402500 40295000 21020 5 7954 8136 32960 32960 LGNSLLR 7 0 1 Unmodified _LGNSLLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 391.7416 2 386.73742 771.460287 94430.17 0.069299 2.6801E-05 0.28591 0.00011057 0.35521 0.00013737 386.737455282162 391.741539910579 43.891 0.4135 43.891 43.693 44.106 3.8147E-06 129 38 5 0 0 0 0.0079269 1 23551 128.48 57.125 1 0.66928 0.69578 0 38040000 20337000 17703000 21021 186;1747 7955 8137 32961 32961 LGNTTVICGVK 11 1 0 Unmodified _LGNTTVICGVK_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.3258 2 581.318448 1160.62234 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.25 1 52.25 51.75 52.75 -3.8147E-06 0 0 0 0.0049268 1 29011 65.157 23.505 1 21022 1959 7956 8138 32962 32962 LGNTTVICGVK 11 1 0 Unmodified _LGNTTVICGVK_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.3263 2 581.318448 1160.62234 82674.93 0.65066 0.00037824 -0.39181 -0.00022777 0.25885 0.00015047 581.317791462271 585.32559015783 51.058 0.35332 51.058 50.822 51.176 -3.8147E-06 87 28 4 0 0 0 0.0011232 1 28841 69.915 69.915 1 0.62936 0.63812 0 12905000 8864300 4040900 21023 1959 7956 8138 32963 32963 LGNTTVICGVK 11 1 0 Unmodified _LGNTTVICGVK_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.3257 2 581.318448 1160.62234 78302.77 0.40349 0.00023456 -0.38066 -0.00022129 0.02283 1.3272E-05 581.318225041196 585.324495647986 60.152 0.34452 60.152 59.991 60.335 0 78 22 6 0 0 0 0.030651 1 30803 38.567 38.567 1 0.67959 0.53908 0 4519700 2387900 2131800 21024 1959 7956 8138 32964 32964 LGNTTVICGVK 11 1 0 Unmodified _LGNTTVICGVK_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.3255 2 581.318448 1160.62234 82059.27 0.36592 0.00021272 0.12342 7.1749E-05 0.48935 0.00028447 581.318637184189 585.325286543042 60.52 0.39426 60.52 60.353 60.748 0 85 29 4 0 0 0 0.017321 1 30275 45.368 45.368 1 1.1132 0.87396 0 3305500 1689900 1615600 21025 1959 7956 8138 32965 32965 LGNVNIDIIHR 11 0 1 Unmodified _LGNVNIDIIHR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.7666 3 421.910449 1262.70952 92616.06 0.080299 3.3879E-05 -0.062373 -2.6316E-05 0.017926 7.5633E-06 421.910418692326 425.246351512314 76.68 0.59428 76.68 76.432 77.026 0 272 50 8 0 0 0 0.052335 1 45110 27.149 16.823 1 1.1792 1.2838 0 51068000 22522000 28546000 21026 1412 7957 8139 32966 32966 LGPASAADTGSEAKPGALAEGAAEPEPQR 29 1 1 Unmodified _LGPASAADTGSEAKPGALAEGAAEPEPQR_ 0 0 1 Q9NYB0 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 923.1291 3 916.786015 2747.33622 65516.77 0.28337 0.00025979 0.051433 4.7153E-05 0.3348 0.00030694 916.785732701855 923.128128116922 72.868 0.39218 72.868 72.698 73.09 0 150 32 8 0 0 0 0.018853 2 37649 20.043 20.043 1 1.5403 1.3128 0 3022800 1219400 1803400 21027 2082 7958 8140 32967;32968 32967 LGPGGLDPVEVYESLPEELQK 21 1 0 Unmodified _LGPGGLDPVEVYESLPEELQK_ 0 0 0 K7EQA9;Q6FG59;A0A024R7B7;Q16543;K7EIU0;A1L0W4 K7EQA9 K7EQA9 CDC37;MBD5 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1139.5927 2 1135.08355 2268.15254 NaN NaN NaN 0.57774 0.00065578 NaN NaN NaN NaN 126.48 0.23058 126.48 126.34 126.57 0 0 0 0 0.020093 1 82316 31.389 24.019 1 NaN NaN 0 4072100 0 4072100 21028 218 7959 8141 32969 32969 LGPGGLDPVEVYESLPEELQK 21 1 0 Unmodified _LGPGGLDPVEVYESLPEELQK_ 0 0 0 K7EQA9;Q6FG59;A0A024R7B7;Q16543;K7EIU0;A1L0W4 K7EQA9 K7EQA9 CDC37;MBD5 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1139.0919 2 1135.08355 2268.15254 NaN NaN NaN 0.92391 0.0010487 NaN NaN NaN NaN 126.09 0.28102 126.09 126.03 126.31 0 0 0 0 0.010433 1 84094 36.944 25.505 1 NaN NaN 0 5845000 0 5845000 21029 218 7959 8141 32970 32970 LGPGRPLPTFPTSECTSDVEPDTR 24 0 2 Unmodified _LGPGRPLPTFPTSECTSDVEPDTR_ 0 0 1 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.4275 3 877.09027 2628.24898 65446.19 0.54616 0.00047903 -0.023023 -2.0193E-05 0.52314 0.00045884 877.4243660387 884.096805400478 85.945 0.73026 85.945 85.592 86.323 0 380 61 9 0 0 0 0.00095708 3 51496 30.592 27.71 1 0.93318 1.0142 0 41640000 19710000 21930000 21030 1933 7960 8142 32971;32972;32973 32972 LGPGRPLPTFPTSECTSDVEPDTR 24 0 2 Unmodified _LGPGRPLPTFPTSECTSDVEPDTR_ 0 0 1 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.7626 3 877.09027 2628.24898 64811.77 0.82026 0.00071944 -0.21413 -0.00018781 0.60613 0.00053163 877.75848847243 883.762437237742 84.91 0.67037 84.91 84.676 85.347 0 359 57 9 0 0 0 3.2004E-09 2 52090 56.298 56.298 1 0.90567 1.0391 0 52499000 26141000 26358000 21031 1933 7960 8142 32974;32975 32975 LGPGRPLPTFPTSECTSDVEPDTR 24 0 2 Unmodified _LGPGRPLPTFPTSECTSDVEPDTR_ 0 0 1 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 884.0977 3 877.09027 2628.24898 64080.02 0.55379 0.00048572 0.33493 0.00029377 0.88872 0.00077949 877.424719396567 883.762768995491 98.344 0.65904 98.344 97.983 98.642 0 260 39 11 0 0 0 4.0353E-12 2 55503 70.533 70.533 1 1.4831 1.24 0 14796000 5794700 9001600 21032 1933 7960 8142 32976;32977 32977 LGPGRPLPTFPTSECTSDVEPDTR 24 0 2 Unmodified _LGPGRPLPTFPTSECTSDVEPDTR_ 0 0 1 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 877.4244 3 877.09027 2628.24898 64323.87 0.31327 0.00027476 0.056361 4.9433E-05 0.36963 0.0003242 877.424724408395 884.096912124629 98.132 0.62132 98.132 97.806 98.427 0 267 37 11 0 0 0 0.010112 1 54372 22.533 22.533 1 1.4738 1.355 0 13446000 5523800 7922000 21033 1933 7960 8142 32978 32978 LGPLLDILADSR 12 0 1 Unmodified _LGPLLDILADSR_ 0 0 0 Q58F09;Q13724;A8K9K4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.8724 2 641.871902 1281.72925 77225.45 0.75998 0.00048781 -0.070046 -4.4961E-05 0.68993 0.00044285 641.871688265497 646.875898510361 122.12 0.49875 122.12 121.88 122.38 7.6294E-06 156 33 6 0 0 0 0.00012005 2 78980 94.616 94.616 1 0.91308 0.92015 0 9438400 4862600 4575700 21034 1720 7961 8143 32979;32980 32979 LGPLLDILADSR 12 0 1 Unmodified _LGPLLDILADSR_ 0 0 0 Q58F09;Q13724;A8K9K4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.8721 2 641.871902 1281.72925 77662.02 0.76133 0.00048867 -0.12016 -7.7128E-05 0.64117 0.00041155 641.871795275432 646.875878893528 121.57 0.51076 121.57 121.37 121.89 0 174 38 6 0 0 0 0.00021114 2 80451 81.017 73.781 1 0.99605 0.99178 0 11740000 6381200 5358400 21035 1720 7961 8143 32981;32982 32981 LGPLLDILADSR 12 0 1 Unmodified _LGPLLDILADSR_ 0 0 0 Q58F09;Q13724;A8K9K4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.8759 2 641.871902 1281.72925 78691.31 1.2598 0.00080866 -0.11039 -7.0853E-05 1.1495 0.0007378 641.871681285293 646.875953749555 134.34 0.29546 134.34 134.18 134.48 0 49 13 6 0 0 0 0.00050599 1 81962 69.979 69.979 1 0.97875 0.82198 0 4281400 2058300 2223100 21036 1720 7961 8143 32983 32983 LGPLLDILADSR 12 0 1 Unmodified _LGPLLDILADSR_ 0 0 0 Q58F09;Q13724;A8K9K4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.8762 2 641.871902 1281.72925 79278.38 1.1964 0.00076795 -0.19339 -0.00012413 1.003 0.00064382 641.871626595113 646.875801411307 134.16 0.3204 134.16 134 134.32 1.5259E-05 65 17 5 0 0 0 0.0071291 1 80896 48.741 44.29 1 0.76402 0.67524 0 3720700 2096500 1624200 21037 1720 7961 8143 32984 32984 LGPLLLDPSLAVR 13 0 1 Unmodified _LGPLLLDPSLAVR_ 0 0 0 Q7Z4Q2 Q7Z4Q2 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.4232 2 682.41902 1362.82349 NaN NaN NaN 0.13272 9.057E-05 NaN NaN NaN NaN 121.41 0.33179 121.41 121.22 121.55 0 0 0 0 0.0046825 1 78411 60.518 46.927 1 NaN NaN 0 3865300 0 3865300 21038 1876 7962 8144 32985 32985 LGPLLLDPSLAVR 13 0 1 Unmodified _LGPLLLDPSLAVR_ 0 0 0 Q7Z4Q2 Q7Z4Q2 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.4246 2 682.41902 1362.82349 NaN NaN NaN 0.19414 0.00013249 NaN NaN NaN NaN 120.97 0.50604 120.97 120.66 121.17 7.6294E-06 0 0 0 0.0016835 1 79883 74.162 60.57 1 NaN NaN 0 4928700 0 4928700 21039 1876 7962 8144 32986 32986 LGPLQVAR 8 0 1 Unmodified _LGPLQVAR_ 0 0 0 P38117 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 432.2701 2 427.266345 852.518136 92189.32 -0.12285 -5.2488E-05 -0.24022 -0.00010264 -0.36306 -0.00015513 427.266450638302 432.270146140537 52.746 0.77783 52.746 52.317 53.095 0 172 62 4 0 0 0 0.013659 1 30164 64.803 29.654 1 4.8973 5.2837 0 26308000 4400000 21908000 21040 1551 7963 8145 32987 32987 LGPQASSQVVMPPLVR 16 0 1 Oxidation (M) _LGPQASSQVVM(ox)PPLVR_ LGPQASSQVVM(1)PPLVR LGPQASSQVVM(107.17)PPLVR 0 1 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.9736 2 847.966539 1693.91853 66965.28 0.87241 0.00073978 0.39281 0.00033309 1.2652 0.0010729 847.96707787837 852.971287927492 84.951 0.55429 84.951 84.67 85.225 0 190 45 6 0 0 0 4.7048E-09 4 50916 107.17 94.952 1 1.1882 1.2259 0 19959000 11422000 8537700 21041 229 7964 8146 32988;32989;32990;32991 32990 168 LGPQASSQVVMPPLVR 16 0 1 Oxidation (M) _LGPQASSQVVM(ox)PPLVR_ LGPQASSQVVM(1)PPLVR LGPQASSQVVM(66.5)PPLVR 0 1 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.966 2 847.966539 1693.91853 66659.14 1.0155 0.00086111 -0.083956 -7.1192E-05 0.93155 0.00078992 847.966831785214 852.970541499672 83.968 0.57834 83.968 83.73 84.308 0 192 47 6 0 0 0 7.4006E-05 2 51456 66.498 60.265 1 1.1499 1.2146 0 23492000 10347000 13144000 21042 229 7964 8146 32992;32993 32993 168 LGPQNFIDETSDIENLLK 18 1 0 Unmodified _LGPQNFIDETSDIENLLK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1027.5322 2 1023.52313 2045.0317 59516.74 0.6827 0.00069876 -0.066824 -6.8396E-05 0.61588 0.00063036 1024.02471223516 1028.03168952166 132.29 0.75702 132.29 131.84 132.6 0 321 50 10 0 0 0 3.5216E-23 2 86272 136.99 136.99 1 1.1442 1.2458 0 49208000 22652000 26555000 21043 1742 7965 8147 32994;32995 32995 LGPQNFIDETSDIENLLK 18 1 0 Unmodified _LGPQNFIDETSDIENLLK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1028.0332 2 1023.52313 2045.0317 59062.79 0.56154 0.00057475 0.11236 0.00011501 0.67391 0.00068976 1024.02477476584 1027.53066166103 131.9 0.85515 131.9 131.39 132.24 0 341 61 10 0 0 0 3.9313E-24 4 88165 137.84 137.84 1 1.13 1.2749 0 63610000 31519000 32091000 21044 1742 7965 8147 32996;32997;32998;32999 32998 LGPQNFIDETSDIENLLKEEEDYKEENNDSK 31 3 0 Unmodified _LGPQNFIDETSDIENLLKEEEDYKEENNDSK_ 0 0 2 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 921.1876 4 914.674699 3654.66969 61869.32 0.70349 0.00064346 -0.10844 -9.9183E-05 0.59505 0.00054428 915.176038894452 920.936138627698 133.52 0.63312 133.52 133.25 133.88 0 201 26 13 0 0 0 0.024726 1 81393 18.066 18.066 1 1.4954 1.4006 0 13150000 5327500 7822400 21045 1742 7966 8148 33000 33000 LGPQNFIDETSDIENLLKEEEDYKEENNDSK 31 3 0 Unmodified _LGPQNFIDETSDIENLLKEEEDYKEENNDSK_ 0 0 2 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 920.9365 4 914.674699 3654.66969 62405.43 0.93474 0.00085499 -0.29581 -0.00027057 0.63893 0.00058441 914.924758764529 920.936110822529 133.23 0.67845 133.23 132.93 133.61 0 138 27 10 0 0 0 1.0211E-30 1 80164 94.73 94.73 1 0.72096 0.71305 0 11624000 3942900 7680700 21046 1742 7966 8148 33001 33001 LGPSVVGLAR 10 0 1 Unmodified _LGPSVVGLAR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.7975 2 484.798009 967.581465 88820.53 0.10907 5.2875E-05 -0.71546 -0.00034685 -0.60639 -0.00029398 484.797592210869 489.801689756852 73.04 0.75211 73.04 72.467 73.219 0 155 58 5 0 0 0 0.0027872 2 42635 67.494 44.422 1 1.1526 1.2237 0 42272000 22018000 20255000 21047 1741 7967 8149 33002;33003 33002 LGPSVVGLAR 10 0 1 Unmodified _LGPSVVGLAR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7977 2 484.798009 967.581465 88568.57 0.016069 7.79E-06 -0.62431 -0.00030266 -0.60824 -0.00029487 484.797549787677 489.801784607587 71.656 0.67976 71.656 71.084 71.764 0 151 49 5 0 0 0 0.041181 1 42836 38.303 12.566 1 1.0975 1.2011 0 33450000 18233000 15217000 21048 1741 7967 8149 33004 33004 LGPSVVGLAR 10 0 1 Unmodified _LGPSVVGLAR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.8023 2 484.798009 967.581465 87313.76 0.12017 5.8256E-05 -0.45786 -0.00022197 -0.33769 -0.00016371 484.797501561662 489.801854120348 83.33 1.0539 83.33 82.803 83.857 0 244 68 5 0 0 0 0.016374 1 45377 48.283 31.507 1 1.3929 1.1984 0 7034400 2964800 4069600 21049 1741 7967 8149 33005 33005 LGPSVVGLAR 10 0 1 Unmodified _LGPSVVGLAR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.8017 2 484.798009 967.581465 87662 0.37668 0.00018261 -0.51796 -0.00025111 -0.14128 -6.8492E-05 484.797589198709 489.801771796116 83.438 0.92957 83.438 82.945 83.874 -7.6294E-06 231 55 6 0 0 0 0.021656 2 44835 46.158 29.382 1 1.4315 1.1916 0 7181500 3040400 4141100 21050 1741 7967 8149 33006;33007 33007 LGQAELVVIDEAAAIPLPLVK 21 1 0 Unmodified _LGQAELVVIDEAAAIPLPLVK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1084.6478 2 1080.13793 2158.26131 58129.8 -0.032107 -3.468E-05 1.1637 0.0012569 1.1316 0.0012222 1080.13970485901 1084.64769607912 133.57 0.2149 133.57 133.43 133.64 0 17 4 8 0 0 0 9.1009E-08 2 87600 68.751 68.751 1 0.89753 1.0172 0 155940000 78481000 77462000 21051 2023;1687 7968 8150 33008;33009 33008 LGQAELVVIDEAAAIPLPLVK 21 1 0 Unmodified _LGQAELVVIDEAAAIPLPLVK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1080.1144 2 1080.13793 2158.26131 58891.99 0.30575 0.00033026 0.58193 0.00062857 0.88769 0.00095883 1080.63969652294 1084.6471721563 133.59 0.14989 133.59 133.48 133.63 0 18 2 9 0 0 0 6.8956E-59 3 89789 172.57 172.57 1 0.98737 1.1062 0 81198000 40388000 40811000 21052 2023;1687 7968 8150 33010;33011;33012 33010 LGQAELVVIDEAAAIPLPLVK 21 1 0 Unmodified _LGQAELVVIDEAAAIPLPLVK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1084.1466 2 1080.13793 2158.26131 NaN NaN NaN NaN NaN NaN NaN NaN NaN 142.59 1 142.59 142.09 143.09 0 0 0 0 0.00044242 1 92121 56.482 43.363 1 21053 2023;1687 7968 8150 33013 33013 LGQAELVVIDEAAAIPLPLVK 21 1 0 Unmodified _LGQAELVVIDEAAAIPLPLVK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1084.6469 2 1080.13793 2158.26131 58195.38 0.23221 0.00025082 0.38295 0.00041364 0.61516 0.00066446 1080.63990607525 1084.6466855957 134.91 0.19633 134.91 134.8 135 0 22 3 8 0 0 0 7.2157E-07 2 82670 56.599 56.599 1 1.4732 1.2676 0 90770000 37477000 53292000 21054 2023;1687 7968 8150 33014;33015 33014 LGQAELVVIDEAAAIPLPLVK 21 1 0 Unmodified _LGQAELVVIDEAAAIPLPLVK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1084.6471 2 1080.13793 2158.26131 58495.25 0.42054 0.00045425 0.78501 0.00084792 1.2056 0.0013022 1080.13928612498 1084.6468151517 134.93 0.19141 134.93 134.76 134.95 1.5259E-05 19 3 8 0 0 0 4.0694E-07 1 81744 59.709 59.709 1 1.7891 1.4866 0 37492000 14087000 23405000 21055 2023;1687 7968 8150 33016 33016 LGQALTEVYAK 11 1 0 Unmodified _LGQALTEVYAK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H7C0A4;Q5HYC5 A0A024R4E5 A0A024R4E5 HDLBP;DKFZp686L08115 Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.8403 2 596.832246 1191.64994 81058.86 0.64848 0.00038704 0.25538 0.00015242 0.90386 0.00053946 596.832324808715 600.839152119454 64.088 0.61341 64.088 63.806 64.419 0 187 56 5 0 0 0 0.00022817 2 37804 91.584 43.16 1 2.0376 2.1363 0 19507000 7121900 12385000 21056 154 7969 8151 33017;33018 33018 LGQASLGVIK 10 1 0 Unmodified _LGQASLGVIK_ 0 0 0 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.3129 2 493.305667 984.596781 86825.8 0.20237 9.9833E-05 -0.034346 -1.6943E-05 0.16803 8.289E-05 493.305536218856 497.312748435378 62.37 0.93202 62.37 62.013 62.945 -3.8147E-06 283 85 5 0 0 0 4.4037E-08 1 36510 117.04 58.055 1 1.1535 1.2384 0 21422000 9935200 11487000 21057 780 7970 8152 33019 33019 LGQASLGVIK 10 1 0 Unmodified _LGQASLGVIK_ 0 0 0 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.3127 2 493.305667 984.596781 88997.53 0.15233 7.5146E-05 0.088326 4.3572E-05 0.24066 0.00011872 493.30568379305 497.312709594618 73.69 0.7505 73.69 73.284 74.034 0 223 51 6 0 0 0 0.0078964 1 38080 56.81 23.998 1 1.3709 1.1151 0 4522400 1800700 2721700 21058 780 7970 8152 33020 33020 LGQDPYR 7 0 1 Unmodified _LGQDPYR_ 0 0 0 P18583 P18583 P18583 SON Protein SON MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 429.7209 2 424.716685 847.418816 93351.34 0.07005 2.9751E-05 0.016874 7.1665E-06 0.086923 3.6918E-05 424.716532308458 429.720662746214 22.653 0.31924 22.653 22.526 22.845 0 64 19 4 0 0 0 0.030596 2 8720 68.485 27.384 1 1.3989 1.4612 0 10624000 4605100 6018600 21059 1499 7971 8153 33021;33022 33022 LGQGVLVQVSPSLVK 15 1 0 Unmodified _LGQGVLVQVSPSLVK_ 0 0 0 Q13868;B3KQW2 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.4618 2 762.461416 1522.90828 69047.82 0.67912 0.00051781 -0.39561 -0.00030164 0.28351 0.00021617 762.461436670468 766.467964088091 103.69 0.67026 103.69 103.42 104.09 0 240 53 6 0 0 0 0.00018069 2 63976 77.597 77.597 1 0.94447 0.92563 0 21112000 9732000 11380000 21060 1722 7972 8154 33023;33024 33024 LGQGVLVQVSPSLVK 15 1 0 Unmodified _LGQGVLVQVSPSLVK_ 0 0 0 Q13868;B3KQW2 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.4614 2 762.461416 1522.90828 70069.2 0.75119 0.00057276 -0.33952 -0.00025887 0.41167 0.00031388 762.461434423865 766.467983150273 103.07 0.56367 103.07 102.73 103.29 0 237 44 6 0 0 0 0.00018855 2 64971 77.124 77.124 1 0.99906 1.0342 0 33150000 17292000 15858000 21061 1722 7972 8154 33025;33026 33026 LGQGVLVQVSPSLVK 15 1 0 Unmodified _LGQGVLVQVSPSLVK_ 0 0 0 Q13868;B3KQW2 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 762.4619 2 762.461416 1522.90828 70003.21 1.1174 0.00085198 0.2378 0.00018132 1.3552 0.0010333 762.461525483704 766.468686240836 115.68 0.45528 115.68 115.5 115.95 -7.6294E-06 125 20 8 0 0 0 1.0994E-05 2 67819 92.247 85.805 1 0.95251 0.75732 0 19310000 10145000 9164800 21062 1722 7972 8154 33027;33028 33028 LGQGVLVQVSPSLVK 15 1 0 Unmodified _LGQGVLVQVSPSLVK_ 0 0 0 Q13868;B3KQW2 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.4617 2 762.461416 1522.90828 70456.81 0.8511 0.00064893 0.083868 6.3946E-05 0.93497 0.00071288 762.461491317528 766.468522816053 115.45 0.4416 115.45 115.26 115.7 7.6294E-06 130 20 9 0 0 0 0.00021948 2 66722 62.924 61.669 1 1.0266 0.82473 0 15810000 7592500 8217400 21063 1722 7972 8154 33029;33030 33030 LGQHVVGMAPLSVGSLDDEPGGEAETK 27 1 0 Oxidation (M) _LGQHVVGM(ox)APLSVGSLDDEPGGEAETK_ LGQHVVGM(1)APLSVGSLDDEPGGEAETK LGQHVVGM(50.06)APLSVGSLDDEPGGEAETK 0 1 0 E5KS95;P43897;B4DHY8 E5KS95 E5KS95 TSFM Elongation factor Ts, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 906.4441 3 903.772718 2708.29632 63778.08 0.44151 0.00039903 -0.094531 -8.5435E-05 0.34698 0.00031359 904.106621459818 906.778404140926 82.127 0.5664 82.127 81.879 82.445 0 193 50 6 0 0 0 2.1931E-10 2 50147 50.055 50.055 1 3.3124 3.6183 0 40328000 7614200 32714000 21064 1208 7973 8155 33031;33032 33032 925 LGQLLYLTNLEK 12 1 0 Unmodified _LGQLLYLTNLEK_ 0 0 0 A0A0D9SFM0;Q149N8;B3KX98 A0A0D9SFM0 A0A0D9SFM0 SHPRH E3 ubiquitin-protein ligase SHPRH MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.9158 2 702.908485 1403.80242 75587.41 0.57055 0.00040104 0.010827 7.6104E-06 0.58137 0.00040865 702.90840743871 706.916079344074 110.31 0.27909 110.31 110.15 110.43 0 58 18 4 0 0 0 0.0091928 1 70930 47.288 47.288 1 0.88961 0.90026 0 9014000 4088900 4925100 21065 527 7974 8156 33033 33033 LGQLLYLTNLEK 12 1 0 Unmodified _LGQLLYLTNLEK_ 0 0 0 A0A0D9SFM0;Q149N8;B3KX98 A0A0D9SFM0 A0A0D9SFM0 SHPRH E3 ubiquitin-protein ligase SHPRH MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.9175 2 702.908485 1403.80242 77578.26 0.92769 0.00065208 0.25321 0.00017799 1.1809 0.00083006 702.907951000199 707.417831819398 122.27 0.37408 122.27 122.11 122.48 7.6294E-06 45 17 5 0 0 0 0.004055 1 72949 54.471 42.605 1 2.0626 1.6284 0 5317300 1775600 3541700 21066 527 7974 8156 33034 33034 LGQLLYLTNLEK 12 1 0 Unmodified _LGQLLYLTNLEK_ 0 0 0 A0A0D9SFM0;Q149N8;B3KX98 A0A0D9SFM0 A0A0D9SFM0 SHPRH E3 ubiquitin-protein ligase SHPRH ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 706.9163 2 702.908485 1403.80242 NaN NaN NaN 0.53914 0.00037897 NaN NaN NaN NaN 122.09 0.28227 122.09 121.99 122.27 0 0 0 0 0.044909 2 71890 42.395 30.169 1 NaN NaN 0 5080200 0 5080200 21067 527 7974 8156 33035;33036 33036 LGQSVTTIPTVGFNVETVTYK 21 1 0 Unmodified _LGQSVTTIPTVGFNVETVTYK_ 0 0 0 Q6FH17;Q5U025;P62330 Q6FH17 Q6FH17 ARF6 ADP-ribosylation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1132.1119 2 1127.60191 2253.18926 58561.77 0.061469 6.9313E-05 0.73614 0.00083008 0.79761 0.00089939 1128.60432687508 1132.11130549092 116.08 0.33517 116.08 115.93 116.27 7.6294E-06 89 18 7 0 0 0 1.6573E-05 1 73987 47.774 47.774 1 2.735 2.8064 0 14442000 4232000 10210000 21068 1647 7975 8157 33037 33037 LGQVASSLFR 10 0 1 Unmodified _LGQVASSLFR_ 0 0 0 P42696;A2A2V2;Q5TCT4;H7C5M1 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.3063 2 539.306198 1076.59784 81723.59 0.73858 0.00039832 0.24998 0.00013481 0.98856 0.00053313 539.306183453128 544.310231049388 90.679 0.89398 90.679 90.323 91.217 0 239 52 6 0 0 0 0.0046589 2 50196 74.173 61.584 1 0.9596 0.82452 0 7942600 3997300 3945200 21069 1566 7976 8158 33038;33039 33038 LGQVASSLFR 10 0 1 Unmodified _LGQVASSLFR_ 0 0 0 P42696;A2A2V2;Q5TCT4;H7C5M1 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.3069 2 539.306198 1076.59784 81920.98 0.43279 0.00023341 0.12621 6.8064E-05 0.559 0.00030147 539.306120944533 544.31016248067 90.542 0.80971 90.542 90.189 90.999 7.6294E-06 218 48 6 0 0 0 0.010543 2 49278 66.273 49.762 1 1.0193 0.84763 0 6057400 2688300 3369000 21070 1566 7976 8158 33040;33041 33041 LGSESQYSPTPLLK 14 1 0 Unmodified _LGSESQYSPTPLLK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.9055 2 760.403763 1518.79297 68886.64 0.48903 0.00037186 -0.51761 -0.00039359 -0.028577 -2.173E-05 760.40299101482 764.410693730941 79.159 0.60724 79.159 78.967 79.575 0 219 55 5 0 0 0 1.8993E-05 3 46914 97.813 97.813 1 1.2924 1.3898 0 38761000 17416000 21345000 21071 1412 7977 8159 33042;33043;33044 33043 LGSESQYSPTPLLK 14 1 0 Unmodified _LGSESQYSPTPLLK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.9111 2 760.403763 1518.79297 69420.03 0.34786 0.00026451 -0.38217 -0.00029061 -0.034314 -2.6093E-05 760.403149070988 764.410926492611 78.151 0.59012 78.151 77.947 78.537 0 265 51 8 0 0 0 2.0962E-09 2 47256 117.67 98.402 1 1.3373 1.5088 0 63575000 28997000 34578000 21072 1412 7977 8159 33045;33046 33045 LGSESQYSPTPLLK 14 1 0 Unmodified _LGSESQYSPTPLLK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.4111 2 760.403763 1518.79297 69213.39 0.76202 0.00057945 -0.156 -0.00011862 0.60602 0.00046082 760.403541530923 764.410856632309 90.719 0.66475 90.719 90.429 91.093 0 195 38 9 0 0 0 2.6721E-09 2 50252 115.57 94.11 1 1.7299 1.3697 0 10415000 3719400 6695600 21073 1412 7977 8159 33047;33048 33047 LGSESQYSPTPLLK 14 1 0 Unmodified _LGSESQYSPTPLLK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 764.411 2 760.403763 1518.79297 70004.8 0.56708 0.00043121 -0.57443 -0.0004368 -0.0073552 -5.593E-06 760.402866947859 764.410536584232 90.576 0.81401 90.576 90.354 91.168 0 203 46 9 0 0 0 1.6012E-46 1 49426 179.94 169.93 1 1.8319 1.5001 0 8570900 2944200 5626700 21074 1412 7977 8159 33049 33049 LGSFPVR 7 0 1 Unmodified _LGSFPVR_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 388.227 2 388.226688 774.438824 101632.2 0.63875 0.00024798 0.39486 0.0001533 1.0336 0.00040127 388.226789165514 393.230800917536 49.905 0.54664 49.905 49.628 50.174 0 104 45 5 0 0 0 0.026804 1 28132 79.454 19.813 1 1.4174 1.3999 0 14987000 5653900 9332900 21075 1070 7978 8160 33050 33050 LGSLVDEFK 9 1 0 Unmodified _LGSLVDEFK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.2743 2 504.274032 1006.53351 85811.98 0.56636 0.0002856 0.44584 0.00022483 1.0122 0.00051043 504.274191018046 508.28110607218 82.886 1.2221 82.886 82.454 83.676 0 473 102 7 0 0 0 0.00028235 2 49433 103.56 84.076 1 0.52002 0.58797 0 145750000 97987000 47763000 21076 82 7979 8161 33051;33052 33051 LGSLVDEFK 9 1 0 Unmodified _LGSLVDEFK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.2814 2 504.274032 1006.53351 85396.06 0.42587 0.00021476 0.28885 0.00014566 0.71473 0.00036042 504.274085348166 508.28113901275 81.872 1.2229 81.872 81.5 82.723 0 528 105 7 0 0 0 0.00028235 2 49982 103.56 84.867 1 0.4219 0.48648 0 185140000 133790000 51352000 21077 82 7979 8161 33053;33054 33054 LGSLVR 6 0 1 Unmodified _LGSLVR_ 0 0 0 H0YK95;H0YL95;B4DM48;Q9UPM8 H0YK95 H0YK95 AP4E1 AP-4 complex subunit epsilon-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 322.7083 2 322.708131 643.40171 107677.7 0.39855 0.00012862 0.28987 9.3543E-05 0.68842 0.00022216 322.708138565733 327.71227516238 30.226 0.32276 30.226 30.079 30.401 0 83 27 4 0 0 0 0.034645 1 14687 112.27 0 1 1.1867 1.3192 0 74259000 33911000 40348000 21078 1002 7980 8162 33055 33055 LGSLVR 6 0 1 Unmodified _LGSLVR_ 0 0 0 H0YK95;H0YL95;B4DM48;Q9UPM8 H0YK95 H0YK95 AP4E1 AP-4 complex subunit epsilon-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 322.7079 2 322.708131 643.40171 106687.6 0.67342 0.00021732 0.14081 4.5439E-05 0.81423 0.00026276 322.708065099867 327.71222632026 29.706 0.35986 29.706 29.511 29.871 0 102 26 6 0 0 0 0.0039832 1 14331 143.22 0 1 1.0038 1.1449 0 96012000 46305000 49707000 21079 1002 7980 8162 33056 33056 LGSPDYGNSALLSLPGYRPTTR 22 0 2 Unmodified _LGSPDYGNSALLSLPGYRPTTR_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.408 3 779.072879 2334.19681 NaN NaN NaN 0.27707 0.00021586 NaN NaN NaN NaN 98.793 0.69129 98.793 98.492 99.183 0 0 0 0 1.3847E-08 1 61809 69.922 56.748 1 NaN NaN 0 20793000 20793000 0 21080 186;1747 7981 8163 33057 33057 LGSPDYGNSALLSLPGYRPTTR 22 0 2 Unmodified _LGSPDYGNSALLSLPGYRPTTR_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 779.4091 3 779.072879 2334.19681 68718.41 0.96272 0.00075003 0.013627 1.0617E-05 0.97634 0.00076064 779.407475763472 786.079465675578 111.79 0.66696 111.79 111.48 112.15 0 210 39 10 0 0 0 3.4213E-07 2 64805 50.539 50.539 1 0.46146 0.38475 0 16447000 8579400 7867500 21081 186;1747 7981 8163 33058;33059 33059 LGSPDYGNSALLSLPGYRPTTR 22 0 2 Unmodified _LGSPDYGNSALLSLPGYRPTTR_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 779.4082 3 779.072879 2334.19681 68645.43 0.66329 0.00051675 -0.23444 -0.00018265 0.42884 0.0003341 779.4073425246 786.079823628957 111.64 1.0011 111.64 110.99 111.99 0 213 54 9 0 0 0 8.6762E-06 1 63756 46.578 46.578 1 0.46388 0.42753 0 15754000 10443000 5310800 21082 186;1747 7981 8163 33060 33060 LGSSGLGSASSIQAAVR 17 0 1 Unmodified _LGSSGLGSASSIQAAVR_ 0 0 0 Q5H924;A0A024R9Y3;A0A024R9U8;A0A024R9W5;Q7Z6Z7;Q5H935;H0Y659 Q5H924 Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.92 2 780.920643 1559.82673 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.902 1 73.902 73.402 74.402 0 0 0 0 0.0084319 1 44413 46.069 35.144 1 21083 289 7982 8164 33061 33061 LGSTVFVANLDYK 13 1 0 Unmodified _LGSTVFVANLDYK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0;M0QYQ7 P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.8904 2 713.882467 1425.75038 70564.81 0.9798 0.00069946 0.11412 8.1468E-05 1.0939 0.00078093 713.882510324293 717.889690660133 98.431 1.0509 98.431 97.88 98.931 0 496 84 8 0 0 0 9.6148E-06 2 59889 100.55 90.867 1 1.3867 1.6068 0 237020000 105950000 131070000 21084 1599 7983 8165 33062;33063 33062 LGSTVFVANLDYK 13 1 0 Unmodified _LGSTVFVANLDYK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0;M0QYQ7 P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.8895 2 713.882467 1425.75038 70624.3 0.67387 0.00048106 0.037038 2.6441E-05 0.7109 0.0005075 713.882554286164 717.889648282301 97.473 0.94076 97.473 97.207 98.147 0 505 76 10 0 0 0 9.6148E-06 3 60762 100.55 90.867 1 1.4261 1.6743 0 344530000 139970000 204560000 21085 1599 7983 8165 33064;33065;33066 33064 LGSTVFVANLDYK 13 1 0 Unmodified _LGSTVFVANLDYK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0;M0QYQ7 P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.8882 2 713.882467 1425.75038 71118.29 0.92908 0.00066325 0.10419 7.4377E-05 1.0333 0.00073763 713.882505906394 717.88959048995 111.19 0.79079 111.19 110.89 111.68 0 211 36 11 0 0 0 0.014975 1 64248 36.847 36.847 1 1.0055 0.81676 0 27967000 14908000 13059000 21086 1599 7983 8165 33067 33067 LGSTVFVANLDYK 13 1 0 Unmodified _LGSTVFVANLDYK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0;M0QYQ7 P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.89 2 713.882467 1425.75038 72111.16 0.72604 0.00051831 0.017808 1.2713E-05 0.74385 0.00053102 713.882385433082 717.889572730239 111.04 0.71741 111.04 110.69 111.4 0 216 35 9 0 0 0 3.0512E-05 2 63206 98.353 85.777 1 1.0161 0.83881 0 30933000 15673000 15260000 21087 1599 7983 8165 33068;33069 33068 LGSVEAPK 8 1 0 Unmodified _LGSVEAPK_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709;F5H359 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.7291 2 400.729261 799.443968 94794.27 -0.040367 -1.6176E-05 0.16205 6.4938E-05 0.12168 4.8761E-05 400.72914905928 404.736309586128 25.854 0.53587 25.854 25.56 26.096 0 131 27 8 0 0 0 0.011754 2 11311 69.198 37.262 1 1.1135 1.2612 0 154360000 74876000 79487000 21088 1570 7984 8166 33070;33071 33070 LGSVEAPK 8 1 0 Unmodified _LGSVEAPK_ 0 0 0 P46087;F5H5X6;F5GWB7;F5H709;F5H359 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 404.7368 2 400.729261 799.443968 94745.02 0.010245 4.1055E-06 0.17979 7.2047E-05 0.19003 7.6152E-05 400.729141963284 404.736417863602 28.581 0.41321 28.581 28.288 28.701 0 86 20 7 0 0 0 0.045643 1 11420 45.335 29.181 1 1.3704 1.0989 0 7519400 3185300 4334100 21089 1570 7984 8166 33072 33072 LGTEPTSETQDELQR 15 0 1 Unmodified _LGTEPTSETQDELQR_ 0 0 0 B4DLM8;O15381;B4DQJ4 B4DLM8 B4DLM8 NVL Nuclear valosin-containing protein-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.9091 2 852.407763 1702.80097 68584.98 1.1179 0.0009529 0.08755 7.4628E-05 1.2054 0.0010275 852.408019136452 857.913403990746 44.368 0.39206 44.368 44.198 44.59 0 134 34 6 0 0 0 6.6387E-05 1 23838 84.479 49.947 1 1.7954 1.8767 0 13162000 4563900 8598300 21090 997 7985 8167 33073 33073 LGTEPTSETQDELQR 15 0 1 Unmodified _LGTEPTSETQDELQR_ 0 0 0 B4DLM8;O15381;B4DQJ4 B4DLM8 B4DLM8 NVL Nuclear valosin-containing protein-like ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.4095 2 852.407763 1702.80097 NaN NaN NaN 0.51052 0.00043517 NaN NaN NaN NaN 43.581 0.2821 43.581 43.414 43.696 0 0 0 0 2.2608E-10 1 23614 109.6 66.087 1 NaN NaN 0 6068700 6068700 0 21091 997 7985 8167 33074 33074 LGTEPTSETQDELQR 15 0 1 Unmodified _LGTEPTSETQDELQR_ 0 0 0 B4DLM8;O15381;B4DQJ4 B4DLM8 B4DLM8 NVL Nuclear valosin-containing protein-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 857.9135 2 852.407763 1702.80097 67681.12 0.43376 0.00036974 0.25466 0.00021708 0.68842 0.00058681 852.408152395194 857.412252317365 52.503 0.51155 52.503 52.295 52.806 0 171 42 6 0 0 0 0.047206 1 25341 23.711 17.988 1 1.5965 1.4351 0 2257600 992650 1265000 21092 997 7985 8167 33075 33075 LGTLEQEATADVEWR 15 0 1 Unmodified _LGTLEQEATADVEWR_ 0 0 0 H0Y714;Q96G21;E7ENR5 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 859.4235 2 859.423216 1716.83188 65689.49 0.88803 0.0007632 -0.059004 -5.071E-05 0.82903 0.00071249 859.422961310652 864.427139019388 92.741 0.95457 92.741 92.387 93.341 0 356 85 6 0 0 0 1.4478E-05 3 56094 113.22 113.22 1 0.74208 0.75697 0 30665000 16367000 14297000 21093 1286 7986 8168 33076;33077;33078 33078 LGTLEQEATADVEWR 15 0 1 Unmodified _LGTLEQEATADVEWR_ 0 0 0 H0Y714;Q96G21;E7ENR5 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 859.4276 2 859.423216 1716.83188 66170.96 0.92745 0.00079707 0.031213 2.6825E-05 0.95866 0.00082389 859.423057835893 864.427246845722 92.04 0.71304 92.04 91.763 92.476 0 317 61 7 0 0 0 2.7291E-10 4 56903 149.41 149.41 1 0.82862 0.90541 0 37036000 19559000 17477000 21094 1286 7986 8168 33079;33080;33081;33082 33081 LGTLEQEATADVEWR 15 0 1 Unmodified _LGTLEQEATADVEWR_ 0 0 0 H0Y714;Q96G21;E7ENR5 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 864.4304 2 859.423216 1716.83188 64917.53 0.62544 0.00053752 0.18398 0.00015812 0.80943 0.00069564 859.925284062405 864.427260335759 106.42 0.90236 106.42 105.91 106.81 0 233 48 9 0 0 0 0.00032702 2 60729 72.958 66.574 1 1.3174 1.077 0 13800000 5468000 8331800 21095 1286 7986 8168 33083;33084 33083 LGTLEQEATADVEWR 15 0 1 Unmodified _LGTLEQEATADVEWR_ 0 0 0 H0Y714;Q96G21;E7ENR5 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 864.9299 2 859.423216 1716.83188 65749.38 0.54979 0.0004725 -0.051744 -4.447E-05 0.49805 0.00042803 859.423122872737 864.427285078759 106.34 0.79517 106.34 105.88 106.67 0 245 47 7 0 0 0 0.000729 2 59793 66.023 58.623 1 1.3239 1.1028 0 15766000 7004600 8761500 21096 1286 7986 8168 33085;33086 33085 LGTLSLPLPPAQTSDR 16 0 1 Unmodified _LGTLSLPLPPAQTSDR_ 0 0 0 Q9GZS1;B4E005 Q9GZS1 Q9GZS1 POLR1E DNA-directed RNA polymerase I subunit RPA49 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.4677 2 833.462144 1664.90974 69298.95 1.1013 0.0009179 0.34632 0.00028865 1.4476 0.0012065 833.462663739573 838.967536816203 108.71 0.57988 108.71 108.45 109.03 0 118 39 4 0 0 0 0.017383 1 67983 30.004 25.538 1 0.90888 0.94902 0 10587000 3821600 6765200 21097 2022 7987 8169 33087 33087 LGTLSLPLPPAQTSDR 16 0 1 Unmodified _LGTLSLPLPPAQTSDR_ 0 0 0 Q9GZS1;B4E005 Q9GZS1 Q9GZS1 POLR1E DNA-directed RNA polymerase I subunit RPA49 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.4677 2 833.462144 1664.90974 71009.16 0.7863 0.00065535 -0.11788 -9.8253E-05 0.66842 0.0005571 833.462113526568 838.46634317234 108.15 0.56355 108.15 107.89 108.45 0 126 40 6 0 0 0 0.0029665 2 69163 38.634 38.634 1 0.92614 0.9205 0 8516200 4802000 3714300 21098 2022 7987 8169 33088;33089 33089 LGTNQENQQPNQQPPGK 17 1 0 Unmodified _LGTNQENQQPNQQPPGK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 939.4592 2 939.458653 1876.90275 62542.64 0.19235 0.0001807 0.33159 0.00031152 0.52394 0.00049222 939.458813366137 943.465979118052 19.896 0.21427 19.896 19.787 20.001 0 33 6 7 0 0 0 4.9458E-35 2 6363 161.99 161.99 1 0.68787 0.69888 0 13731000 7979100 5751400 21099 1421 7988 8170 33090;33091 33090 LGTNQENQQPNQQPPGK 17 1 0 Unmodified _LGTNQENQQPNQQPPGK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 939.9597 2 939.458653 1876.90275 62885.93 0.23712 0.00022276 0.058019 5.4506E-05 0.29513 0.00027727 939.458538940716 943.967001268478 19.841 0.30833 19.841 19.689 19.997 0 59 12 8 0 0 0 5.0554E-146 3 6177 262.56 252.51 1 0.74156 0.80256 0 22038000 12535000 9503000 21100 1421 7988 8170 33092;33093;33094 33094 LGTNQENQQPNQQPPGK 17 1 0 Unmodified _LGTNQENQQPNQQPPGK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 943.4659 2 939.458653 1876.90275 63109.57 0.18779 0.00017642 0.16842 0.00015822 0.35621 0.00033464 939.458938826007 943.465888830981 21.778 0.39765 21.778 21.564 21.962 0 105 14 11 0 0 0 7.6452E-05 2 6671 64.64 64.64 1 1.319 1.0387 0 17514000 7740000 9773700 21101 1421 7988 8170 33095;33096 33095 LGTNQENQQPNQQPPGK 17 1 0 Unmodified _LGTNQENQQPNQQPPGK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 939.4578 2 939.458653 1876.90275 62589.23 0.18679 0.00017548 0.10687 0.0001004 0.29366 0.00027588 939.458823041256 943.465807898952 21.82 0.46858 21.82 21.571 22.04 0 112 16 9 0 0 0 0.05134 1 6225 22.198 22.198 1 1.3049 1.0713 0 9256300 3858500 5397800 21102 1421 7988 8170 33097 33097 LGTPELSTAER 11 0 1 Unmodified _LGTPELSTAER_ 0 0 0 A0A024R0Y2;B2ZZ90;Q13085;Q7Z5W8;Q59FY4;B4DIG6;B4DIW1;B4DWK9;B4DIR2;B4DK31 A0A024R0Y2 A0A024R0Y2 hCG_30204;ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.3141 2 587.309135 1172.60372 79282.24 0.29141 0.00017115 -0.18217 -0.00010699 0.10924 6.416E-05 587.308974453065 592.31321755849 50.369 0.62001 50.369 49.944 50.564 0 313 59 9 0 0 0 0.00093586 1 27597 71.349 49.263 1 0.89125 0.98575 0 59318000 30165000 29153000 21103 60 7989 8171 33098 33098 LGTPVLQALGDGDFVK 16 1 0 Unmodified _LGTPVLQALGDGDFVK_ 0 0 0 H0YML5;B4DW73;Q6IB91;A0A0S2Z430;Q16822;H0YMU6;H0YNG4;H0YMA5;A0A0A0MS74;A0A0S2Z451;H0YM31 H0YML5 H0YML5 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.9573 2 815.445963 1628.87737 NaN NaN NaN 0.60876 0.00049641 NaN NaN NaN NaN 116.06 0.28352 116.06 115.84 116.12 0 0 0 0 3.6262E-06 1 73941 81.676 62.545 1 NaN NaN 0 3271100 0 3271100 21104 556 7990 8172 33099 33099 LGTPVLQALGDGDFVK 16 1 0 Unmodified _LGTPVLQALGDGDFVK_ 0 0 0 H0YML5;B4DW73;Q6IB91;A0A0S2Z430;Q16822;H0YMU6;H0YNG4;H0YMA5;A0A0A0MS74;A0A0S2Z451;H0YM31 H0YML5 H0YML5 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.4551 2 815.445963 1628.87737 NaN NaN NaN -0.28267 -0.0002305 NaN NaN NaN NaN 115.45 0.31969 115.45 115.35 115.67 0 0 0 0 0.00023849 1 75376 70.089 45.798 1 NaN NaN 0 3544900 0 3544900 21105 556 7990 8172 33100 33100 LGTQPYFFNK 10 1 0 Unmodified _LGTQPYFFNK_ 0 0 0 C9JNK6;C9JAZ1;B7Z9F3;O75431;B3KM74 C9JNK6 C9JNK6 MTX2 Metaxin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.8148 2 607.813856 1213.61316 75836.28 0.31783 0.00019318 -0.82327 -0.0005004 -0.50545 -0.00030722 607.81449985887 611.821033482975 77.717 0.89925 77.717 77.14 78.039 0 218 71 5 0 0 0 0.034771 1 46011 40.882 30.052 1 1.3013 1.2986 0 18902000 7677300 11225000 21106 1107 7991 8173 33101 33101 LGVCFDVPTASVTEIQEK 18 1 0 Unmodified _LGVCFDVPTASVTEIQEK_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1001.0089 2 997.000973 1991.98739 61681.63 0.93224 0.00092944 -0.010188 -1.0157E-05 0.92205 0.00091928 997.502711100175 1001.00784790264 111.51 0.45648 111.51 111.35 111.81 7.6294E-06 204 32 8 0 0 0 8.1315E-08 1 70216 91.62 91.62 1 1.1398 1.2886 0 144830000 64189000 80641000 21107 2065 7992 8174 33102 33102 LGVCFDVPTASVTEIQEK 18 1 0 Unmodified _LGVCFDVPTASVTEIQEK_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1001.007 2 997.000973 1991.98739 61108.94 0.51227 0.00051073 -0.2529 -0.00025214 0.25937 0.00025859 997.502711963711 1001.00746455814 111.06 0.4781 111.06 110.83 111.3 -7.6294E-06 215 35 9 0 0 0 0.00032737 1 71490 46.481 46.481 1 1.1517 1.2882 0 53597000 23725000 29872000 21108 2065 7992 8174 33103 33103 LGVCFDVPTASVTEIQEK 18 1 0 Unmodified _LGVCFDVPTASVTEIQEK_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 997.5043 2 997.000973 1991.98739 60957.8 0.55741 0.00055574 0.16408 0.00016359 0.72149 0.00071933 997.502870408649 1001.50988810802 122.64 0.52441 122.64 122.46 122.99 0 197 25 12 0 0 0 7.35E-05 2 73129 50.897 50.897 1 1.2343 1.0563 0 71813000 32439000 39374000 21109 2065 7992 8174 33104;33105 33105 LGVCFDVPTASVTEIQEK 18 1 0 Unmodified _LGVCFDVPTASVTEIQEK_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 997.5007 2 997.000973 1991.98739 60868.45 0.52402 0.00052245 -0.027641 -2.7558E-05 0.49638 0.00049489 997.001095567656 1001.50969856638 122.55 0.59686 122.55 122.24 122.84 0 197 28 12 0 0 0 1.2771E-05 2 72109 77.894 77.894 1 1.1819 0.99031 0 46562000 21641000 24921000 21110 2065 7992 8174 33106;33107 33107 LGVDLDAQTWR 11 0 1 Unmodified _LGVDLDAQTWR_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.3337 2 637.330402 1272.64625 74453.86 0.89995 0.00057357 0.29982 0.00019109 1.1998 0.00076465 637.330945076668 642.3339858452 91.412 0.41219 91.412 91.166 91.579 0 88 32 5 0 0 0 0.0013046 1 55317 68.525 56.299 1 2.3418 2.4382 0 21140000 6489800 14650000 21111 1507 7993 8175 33108 33108 LGVDLDAQTWR 11 0 1 Unmodified _LGVDLDAQTWR_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3343 2 637.330402 1272.64625 76165.6 1.3375 0.0008524 1.0457 0.00066643 2.3831 0.0015188 637.832281320483 642.334477532839 90.522 0.3371 90.522 90.332 90.669 0 83 28 6 0 0 0 0.00036932 1 55956 83.883 67.918 1 2.5914 2.7295 0 23240000 5024300 18215000 21112 1507 7993 8175 33109 33109 LGVLTSR 7 0 1 Unmodified _LGVLTSR_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 373.2318 2 373.231971 744.449388 97922.65 0.12164 4.54E-05 0.077535 2.8939E-05 0.19917 7.4338E-05 373.231887806566 378.236072624025 39.564 0.92927 39.564 39.035 39.964 0 250 75 6 0 0 0 0.00073443 2 20381 139.92 50.243 1 0.95676 1.0511 0 54032000 28919000 25113000 21113 402 7994 8176 33110;33111 33111 LGVLTSR 7 0 1 Unmodified _LGVLTSR_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.2321 2 373.231971 744.449388 97985.14 0.16949 6.3258E-05 0.23666 8.8327E-05 0.40614 0.00015158 373.23195363581 378.236126594572 38.551 0.81812 38.551 38.09 38.908 0 258 68 6 0 0 0 0.022039 2 20126 92.467 34.299 1 0.96208 1.0943 0 117900000 62512000 55386000 21114 402 7994 8176 33112;33113 33112 LGVLTSR 7 0 1 Unmodified _LGVLTSR_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 378.2358 2 373.231971 744.449388 96840.36 0.043551 1.6254E-05 -0.10711 -3.9977E-05 -0.063559 -2.3722E-05 373.231805902501 378.235972625721 43.903 0.87368 43.903 43.49 44.363 -3.8147E-06 240 57 6 0 0 0 0.043265 1 20157 58.167 16.665 1 1.3676 1.1402 0 6747400 2788100 3959400 21115 402 7994 8176 33114 33114 LGVTNTIISHYDGR 14 0 1 Unmodified _LGVTNTIISHYDGR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.2748 3 515.938845 1544.79471 83758.48 0.48466 0.00025006 -0.010105 -5.2134E-06 0.47456 0.00024484 515.938890024875 519.274926716886 71.57 1.0393 71.57 71.219 72.258 0 569 88 10 0 0 0 7.0568E-05 2 41641 65.172 45.849 1 1.0405 1.2224 0 225510000 107750000 117760000 21116 1570 7995 8177 33115;33116 33116 LGVTNTIISHYDGR 14 0 1 Unmodified _LGVTNTIISHYDGR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.2728 3 515.938845 1544.79471 84072.58 0.3557 0.00018352 0.0017425 8.9903E-07 0.35744 0.00018442 515.938887367995 519.27496972365 70.168 1.1019 70.168 69.671 70.773 -7.6294E-06 557 90 9 0 0 0 6.1274E-15 2 41631 131.53 131.53 1 1.0165 1.1803 0 346240000 179910000 166330000 21117 1570 7995 8177 33117;33118 33118 LGVTNTIISHYDGR 14 0 1 Unmodified _LGVTNTIISHYDGR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 519.275 3 515.938845 1544.79471 84066.64 0.38013 0.00019612 -0.17379 -8.9667E-05 0.20633 0.00010646 515.938838205362 519.27486511426 81.889 1.0984 81.889 81.56 82.658 0 391 65 10 0 0 0 2.9752E-07 1 44345 109.84 90.515 1 1.0707 0.92058 0 45398000 22728000 22670000 21118 1570 7995 8177 33119 33119 LGVTNTIISHYDGR 14 0 1 Unmodified _LGVTNTIISHYDGR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.275 3 515.938845 1544.79471 83832.53 0.24952 0.00012874 -0.052393 -2.7032E-05 0.19713 0.0001017 515.939100644984 519.274854818356 81.98 1.053 81.98 81.452 82.505 0 365 58 10 0 0 0 3.6482E-05 2 43549 82.102 69.269 1 1.1 0.95963 0 47681000 22344000 25337000 21119 1570 7995 8177 33120;33121 33120 LGWGSGWDVLLPK 13 1 0 Unmodified _LGWGSGWDVLLPK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.3958 2 714.387719 1426.76089 NaN NaN NaN -0.98048 -0.00070045 NaN NaN NaN NaN 125.9 0.40243 125.9 125.71 126.11 7.6294E-06 0 0 0 0.0060749 1 81912 55.314 46.356 1 NaN NaN 0 1887800 0 1887800 21120 1965 7996 8178 33122 33122 LGWSQPLGNLQAPLGYDK 18 1 0 Unmodified _LGWSQPLGNLQAPLGYDK_ 0 0 0 A8K6T5;Q9UBL3;F5H8F7;B4DPT1;H0YBF6;B4DEM3 A8K6T5 A8K6T5 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.0133 2 979.012532 1956.01051 62888.07 0.33363 0.00032663 -0.47832 -0.00046828 -0.14469 -0.00014165 979.513477320957 983.520315568157 115.43 0.39482 115.43 115.24 115.64 7.6294E-06 82 25 5 0 0 0 0.00081634 2 73476 40.475 40.475 1 0.57363 0.59051 0 10783000 6898000 3885200 21121 763 7997 8179 33123;33124 33124 LGWSQPLGNLQAPLGYDK 18 1 0 Unmodified _LGWSQPLGNLQAPLGYDK_ 0 0 0 A8K6T5;Q9UBL3;F5H8F7;B4DPT1;H0YBF6;B4DEM3 A8K6T5 A8K6T5 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 979.5139 2 979.012532 1956.01051 62292.26 0.53176 0.0005206 -0.45326 -0.00044374 0.078499 7.6851E-05 979.514796843813 983.01910200759 114.92 0.3445 114.92 114.73 115.07 0 86 20 7 0 0 0 0.00067517 1 74841 42.209 42.209 1 0.59052 0.60938 0 11490000 4361400 7128600 21122 763 7997 8179 33125 33125 LGYDPQAK 8 1 0 Unmodified _LGYDPQAK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.2392 2 446.232168 890.449782 89004.08 0.00037122 1.6565E-07 0.16119 7.1928E-05 0.16156 7.2093E-05 446.232150955598 450.239211285149 27.148 0.51191 27.148 26.926 27.438 -1.9073E-06 107 25 6 0 0 0 0.0088018 1 12384 77.058 54.927 1 0.84959 0.9179 0 42443000 23381000 19062000 21123 809 7998 8180 33126 33126 LGYDPQAK 8 1 0 Unmodified _LGYDPQAK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.2388 2 446.232168 890.449782 90249.66 0.31753 0.00014169 0.019761 8.818E-06 0.33729 0.00015051 446.232043705484 450.239105573594 26.709 0.44439 26.709 26.524 26.968 0 93 21 6 0 0 0 0.0088018 2 12165 77.058 62.276 1 0.87062 0.97713 0 76528000 38081000 38447000 21124 809 7998 8180 33127;33128 33128 LHCAFASLPK 10 1 0 Unmodified _LHCAFASLPK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.3106 2 572.302601 1142.59065 78591.3 0.32653 0.00018688 1.3939 0.00079771 1.7204 0.00098458 572.302774201728 576.310456773579 59.555 0.50188 59.555 59.269 59.771 0 109 38 4 0 0 0 0.015104 1 30401 48.794 48.794 1 1.3354 1.1262 0 1555900 701120 854830 21125 1849 7999 8181 33129 33129 LHDETLTYLNQGQSYEIR 18 0 1 Unmodified _LHDETLTYLNQGQSYEIR_ 0 0 0 A8KAN5;A0A024R2L0;Q9NZI7;A0A024R2J0;C9JWL3;A0A024R120;Q12800;F8VX55 A8KAN5;A0A024R120 A0A024R120 UBP1;TFCP2 Upstream-binding protein 1;Alpha-globin transcription factor CP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.6951 3 727.358797 2179.05456 71040.7 0.72872 0.00053004 0.25627 0.0001864 0.98499 0.00071644 728.027947216621 730.695253379621 93.489 0.51058 93.489 93.27 93.781 -7.6294E-06 125 33 6 0 0 0 0.013365 1 52176 22.221 22.221 1 1.0843 0.90622 0 3443400 1589600 1853800 21126 66;115 8000 8182 33130 33130 LHDLLPPD 8 0 0 Unmodified _LHDLLPPD_ 0 0 0 A0A024R5Q8;Q05D32 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.2482 2 460.247818 918.481082 NaN NaN NaN 0.97952 0.00045082 NaN NaN NaN NaN 71.205 1.3429 71.205 70.383 71.726 0 0 0 0 0.050893 1 42405 49.59 37.159 1 21127 187 8001 8183 33131 33131 LHDNPLTDENK 11 1 0 Unmodified _LHDNPLTDENK_ 0 0 0 Q58F05;B4E2T6;A0A0B4J1W3;B2RBE5;Q9BXJ9 Q58F05 Q58F05 NARG1;NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.3154 2 648.314948 1294.61534 76541.92 0.87942 0.00057014 -0.14915 -9.6699E-05 0.73027 0.00047344 648.31537433292 652.822739087238 26.857 0.18833 26.857 26.738 26.926 0 32 13 5 0 0 0 0.0023522 1 12164 61.78 55.475 1 2.5659 2.5951 0 6841100 2400000 4441100 21128 499 8002 8184 33132 33132 LHDNPLTDENK 11 1 0 Unmodified _LHDNPLTDENK_ 0 0 0 Q58F05;B4E2T6;A0A0B4J1W3;B2RBE5;Q9BXJ9 Q58F05 Q58F05 NARG1;NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3229 2 648.314948 1294.61534 NaN NaN NaN 0.64552 0.0004185 NaN NaN NaN NaN 26.154 0.23133 26.154 26.02 26.252 0 0 0 0 0.0026195 1 11582 72.848 62.76 1 NaN NaN 0 4457300 0 4457300 21129 499 8002 8184 33133 33133 LHDNPLTDENK 11 1 0 Unmodified _LHDNPLTDENK_ 0 0 0 Q58F05;B4E2T6;A0A0B4J1W3;B2RBE5;Q9BXJ9 Q58F05 Q58F05 NARG1;NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.3151 2 648.314948 1294.61534 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.159 1 26.159 25.659 26.659 0 0 0 0 0.00068224 1 11637 72.643 52.314 1 21130 499 8002 8184 33134 33134 LHDSLAIER 9 0 1 Unmodified _LHDSLAIER_ 0 0 0 E9PRB9;E9PL01;B4DDB9;A0A087WUC6;E9PI68;Q15005 E9PRB9 E9PRB9 SPCS2 Signal peptidase complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.2931 2 527.288005 1052.56146 77273.6 0.99655 0.00052547 1.1675 0.0006156 2.164 0.0011411 527.287804740226 532.293070268257 34.365 0.18462 34.365 34.284 34.469 0 27 11 4 0 0 0 0.0056063 1 17394 66.299 46.784 1 0.68457 0.68305 0 16693000 7434000 9258900 21131 410 8003 8185 33135 33135 LHDSSGSQVGTGFK 14 1 0 Unmodified _LHDSSGSQVGTGFK_ 0 0 0 P49792 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3544 2 710.34678 1418.67901 NaN NaN NaN -0.51028 -0.00036248 NaN NaN NaN NaN 24.79 0.19894 24.79 24.668 24.867 0 0 0 0 0.00022569 1 10477 84.188 58.95 1 NaN NaN 0 6152500 0 6152500 21132 1588 8004 8186 33136 33136 LHDSSGSQVGTGFK 14 1 0 Unmodified _LHDSSGSQVGTGFK_ 0 0 0 P49792 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.3542 2 710.34678 1418.67901 NaN NaN NaN -0.56008 -0.00039785 NaN NaN NaN NaN 24.395 0.25751 24.395 24.22 24.478 0 0 0 0 1.6849E-09 1 10085 106.67 85.295 1 NaN NaN 0 6311900 0 6311900 21133 1588 8004 8186 33137 33137 LHDSSGSQVGTGFK 14 1 0 Unmodified _LHDSSGSQVGTGFK_ 0 0 0 P49792 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.3473 2 710.34678 1418.67901 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.392 1 24.392 23.892 24.892 -1.9073E-06 0 0 0 0.038631 1 10137 53.569 34.789 1 21134 1588 8004 8186 33138 33138 LHEEGIIYR 9 0 1 Unmodified _LHEEGIIYR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.3079 2 565.303655 1128.59276 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.164 1 38.164 37.664 38.664 0 0 0 0 0.0093753 1 19986 64.265 36.158 1 21135 363 8005 8187 33139 33139 LHEEIQNLIK 10 1 0 Unmodified _LHEEIQNLIK_ 0 0 0 A0A024R7X2;A0A024R7X1;P54274;E7EWM7;A8K914;E5RFJ5 A0A024R7X2 A0A024R7X2 TERF1 Telomeric repeat-binding factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.8494 2 618.85097 1235.68739 NaN NaN NaN -1.6257 -0.0010061 NaN NaN NaN NaN 66.682 0.45334 66.682 66.54 66.993 0 0 0 0 0.033591 2 38431 51.066 29.618 1 NaN NaN 0 4872700 4872700 0 21136 236 8006 8188 33140;33141 33141 LHEEIQNLIK 10 1 0 Unmodified _LHEEIQNLIK_ 0 0 0 A0A024R7X2;A0A024R7X1;P54274;E7EWM7;A8K914;E5RFJ5 A0A024R7X2 A0A024R7X2 TERF1 Telomeric repeat-binding factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.851 2 618.85097 1235.68739 82210.66 0.34668 0.00021454 0.30499 0.00018874 0.65167 0.00040329 618.851076042303 622.858290409276 63.917 0.4999 63.917 63.655 64.155 0 117 46 4 0 0 0 0.001667 1 37566 72.607 53.629 1 0.64371 0.64624 0 6948700 3824200 3124500 21137 236 8006 8188 33142 33142 LHFFMPGFAPLTAR 14 0 1 Oxidation (M) _LHFFM(ox)PGFAPLTAR_ LHFFM(1)PGFAPLTAR LHFFM(54.2)PGFAPLTAR 0 1 0 Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3 Q9BV28 Q9BV28 TUBB3 Tubulin beta-3 chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.2861 3 540.950028 1619.82825 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.43 1 106.43 105.93 106.93 0 0 0 0 0.00131 1 67766 54.199 43.094 1 21138 502 8007 8189 33143 33143 351 LHFFMPGFAPLTSR 14 0 1 Oxidation (M) _LHFFM(ox)PGFAPLTSR_ LHFFM(1)PGFAPLTSR LHFFM(111.12)PGFAPLTSR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;I0CMK4;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB4Q;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2822 3 546.281666 1635.82317 80078.54 0.72698 0.00039713 -0.33355 -0.00018221 0.39342 0.00021492 546.281580318997 549.617640147855 106.6 2.4167 106.6 105.91 108.33 0 1055 180 11 0 0 0 1.3481E-07 5 66414 111.12 111.12 1 2.4324 2.8614 0 231660000 68504000 163150000 21139 1452;1660;1723;1441;2004;1778 8008 8190 33144;33145;33146;33147;33148 33146 1142 LHFFMPGFAPLTSR 14 0 1 Oxidation (M) _LHFFM(ox)PGFAPLTSR_ LHFFM(1)PGFAPLTSR LHFFM(104.17)PGFAPLTSR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;I0CMK4;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB4Q;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.6179 3 546.281666 1635.82317 80891.25 0.65948 0.00036026 -0.20214 -0.00011042 0.45734 0.00024984 546.615993366569 549.617729488504 105.31 2.3182 105.31 104.43 106.75 0 978 177 10 0 0 0 7.3016E-07 5 66896 104.17 104.17 1 2.3986 2.7953 0 465300000 144370000 320930000 21140 1452;1660;1723;1441;2004;1778 8008 8190 33149;33150;33151;33152;33153 33151 1142 LHFFMPGFAPLTSR 14 0 1 Oxidation (M) _LHFFM(ox)PGFAPLTSR_ LHFFM(1)PGFAPLTSR LHFFM(79.69)PGFAPLTSR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;I0CMK4;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB4Q;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.9243 2 818.918861 1635.82317 67203.82 0.90511 0.00074121 -0.71991 -0.00058955 0.1852 0.00015166 818.918934514121 823.922959940452 105.3 1.0638 105.3 104.62 105.69 7.6294E-06 302 78 6 0 0 0 6.4313E-05 3 66702 79.693 72.525 1 1.9111 2.2142 0 57646000 21399000 36247000 21141 1452;1660;1723;1441;2004;1778 8008 8190 33154;33155;33156 33155 1142 LHFFMPGFAPLTSR 14 0 1 Oxidation (M) _LHFFM(ox)PGFAPLTSR_ LHFFM(1)PGFAPLTSR LHFFM(42.32)PGFAPLTSR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;I0CMK4;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB4Q;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.9525 3 546.281666 1635.82317 NaN NaN NaN -0.06383 -3.4869E-05 NaN NaN NaN NaN 106.84 0.42608 106.84 106.74 107.16 0 0 0 0 0.030365 1 68074 42.317 38.798 1 NaN NaN 0 4708600 0 4708600 21142 1452;1660;1723;1441;2004;1778 8008 8190 33157 33157 1142 LHFFMPGFAPLTSR 14 0 1 Oxidation (M) _LHFFM(ox)PGFAPLTSR_ LHFFM(1)PGFAPLTSR LHFFM(45.35)PGFAPLTSR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;I0CMK4;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB4Q;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.6191 3 546.281666 1635.82317 81230.76 0.9029 0.00049324 -0.037994 -2.0756E-05 0.86491 0.00047248 546.615983388323 549.617822793648 115.9 1.0778 115.9 115.64 116.72 -7.6294E-06 236 45 9 0 0 0 0.0011408 1 67889 45.347 40.542 1 0.74443 0.61314 0 18209000 10481000 7728600 21143 1452;1660;1723;1441;2004;1778 8008 8190 33158 33158 1142 LHFFMPGFAPLTSR 14 0 1 Unmodified _LHFFMPGFAPLTSR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;I0CMK4;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB4Q;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.2872 3 540.950028 1619.82825 82974.59 1.0422 0.00056376 -0.43607 -0.00023589 0.6061 0.00032787 540.949782125425 544.285898939916 118.25 1.0902 118.25 117.72 118.81 0 311 63 6 0 0 0 5.9234E-05 3 76162 70.412 63.683 1 1.1942 1.2223 0 14513000 6185100 8327700 21144 1452;1660;1723;1441;2004;1778 8008 8191 33159;33160;33161 33161 LHFFMPGFAPLTSR 14 0 1 Unmodified _LHFFMPGFAPLTSR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;I0CMK4;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB4Q;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.9502 3 540.950028 1619.82825 83365.84 0.63113 0.00034141 0.028373 1.5348E-05 0.6595 0.00035676 540.949852193365 544.286159556134 117.12 1.0497 117.12 116.48 117.53 0 311 63 7 0 0 0 5.031E-05 4 77022 74.537 67.809 1 1.1198 1.2255 0 30835000 14687000 16149000 21145 1452;1660;1723;1441;2004;1778 8008 8191 33162;33163;33164;33165 33165 LHFFMPGFAPLTSR 14 0 1 Unmodified _LHFFMPGFAPLTSR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;I0CMK4;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB4Q;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.2853 3 540.950028 1619.82825 79922.94 0.82172 0.00044451 -0.20538 -0.0001111 0.61634 0.00033341 540.94993976246 544.286030966691 127.65 0.71864 127.65 127.39 128.11 0 170 27 9 0 0 0 6.453E-05 2 76899 67.964 61.882 1 1.4048 1.1479 0 14017000 5774700 8241900 21146 1452;1660;1723;1441;2004;1778 8008 8191 33166;33167 33167 LHFFMPGFAPLTSR 14 0 1 Unmodified _LHFFMPGFAPLTSR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;I0CMK4;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB4Q;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.4286 2 810.921403 1619.82825 68834.35 0.80391 0.00065191 0.078314 6.3506E-05 0.88223 0.00071542 811.422308819689 816.427571889289 127.64 0.46986 127.64 127.48 127.95 -7.6294E-06 52 17 5 0 0 0 0.022641 1 77006 43.308 15.103 1 1.7795 1.543 0 2076300 726920 1349400 21147 1452;1660;1723;1441;2004;1778 8008 8191 33168 33168 LHFFMPGFAPLTSR 14 0 1 Unmodified _LHFFMPGFAPLTSR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;I0CMK4;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350;Q9BUF5 Q5JP53 TUBB;XTP3TPATP1;TUBB4Q;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.285 3 540.950028 1619.82825 81032.52 0.67435 0.00036479 -0.17992 -9.7327E-05 0.49443 0.00026746 541.2842801657 544.286025329821 127.34 0.75755 127.34 127.14 127.9 7.6294E-06 201 30 9 0 0 0 0.00026529 2 75781 57.804 57.804 1 1.4809 1.1989 0 11744000 4440100 7303800 21148 1452;1660;1723;1441;2004;1778 8008 8191 33169;33170 33170 LHGELQDR 8 0 1 Unmodified _LHGELQDR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 326.5061 3 323.170041 966.488293 104151 -0.16857 -5.4477E-05 0.39329 0.0001271 0.22472 7.2622E-05 323.170104194365 326.506142416957 17.329 0.56834 17.329 17.181 17.749 0 73 19 6 0 0 0 0.0098254 1 4510 45.081 4.0523 1 0.9544 1.0614 0 75722000 37048000 38674000 21149 2065 8009 8192 33171 33171 LHGLPEQFLYGTATK 15 1 0 Unmodified _LHGLPEQFLYGTATK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.9734 3 558.966512 1673.87771 83699.04 0.83946 0.00046923 0.30167 0.00016863 1.1411 0.00063785 559.300938279785 561.637676455141 87.917 0.92895 87.917 87.444 88.373 0 322 76 8 0 0 0 3.3761E-06 3 54278 92.265 92.265 1 0.57904 0.65328 0 66165000 45973000 20192000 21150 1679 8010 8193 33172;33173;33174 33174 LHGLPEQFLYGTATK 15 1 0 Unmodified _LHGLPEQFLYGTATK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.9675 3 558.966512 1673.87771 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.406 1 88.406 87.906 88.906 -7.6294E-06 0 0 0 0.0035446 1 54524 53.349 49.499 1 21151 1679 8010 8193 33175 33175 LHGLPEQFLYGTATK 15 1 0 Unmodified _LHGLPEQFLYGTATK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.6375 3 558.966512 1673.87771 81888.87 0.3526 0.00019709 -0.036332 -2.0308E-05 0.31627 0.00017678 558.966526673992 561.637610374194 100.91 0.67108 100.91 100.69 101.36 7.6294E-06 244 46 8 0 0 0 0.0054237 2 57080 32.152 32.152 1 1.0532 0.84196 0 8936800 4219900 4716900 21152 1679 8010 8193 33176;33177 33177 LHGLPEQFLYGTATK 15 1 0 Unmodified _LHGLPEQFLYGTATK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.9661 3 558.966512 1673.87771 82620.6 0.49943 0.00027917 -0.31339 -0.00017517 0.18605 0.000104 558.966353123154 561.637536031125 100.61 0.70213 100.61 100.38 101.08 0 275 50 8 0 0 0 0.00088427 2 56054 31.614 31.614 1 1.0693 0.87365 0 8144100 3988500 4155700 21153 1679 8010 8193 33178;33179 33179 LHGLPEQFLYGTATK 15 1 0 Unmodified _LHGLPEQFLYGTATK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 837.9458 2 837.94613 1673.87771 67152.06 0.50517 0.00042331 -0.04818 -4.0372E-05 0.45699 0.00038294 837.945940659339 841.95300641878 100.62 0.39114 100.62 100.48 100.87 0 88 30 4 0 0 0 0.019064 1 56105 31.597 31.597 1 1.1108 0.88984 0 2446400 1233100 1213300 21154 1679 8010 8193 33180 33180 LHGSVGGAQNLSALGALVSLSNAR 24 0 1 Unmodified _LHGSVGGAQNLSALGALVSLSNAR_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8;I3L445;I3L1P4;I3L4M7 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.7532 3 764.75214 2291.23459 71578.65 0.78033 0.00059676 0.23004 0.00017592 1.0104 0.00077268 765.4219584094 768.087818227163 114.76 0.57878 114.76 114.56 115.14 0 106 37 5 0 0 0 7.5244E-05 2 72909 36.256 36.256 1 1.0404 1.0682 0 6461000 3092200 3368800 21155 746 8011 8194 33181;33182 33182 LHGSVGGAQNLSALGALVSLSNAR 24 0 1 Unmodified _LHGSVGGAQNLSALGALVSLSNAR_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8;I3L445;I3L1P4;I3L4M7 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 768.4232 3 764.75214 2291.23459 70206.12 0.86708 0.0006631 0.018942 1.4486E-05 0.88602 0.00067758 764.752298899516 768.420654053464 125.71 0.45992 125.71 125.52 125.98 0 85 20 7 0 0 0 0.042012 2 75496 11.417 11.417 1 0.61677 0.5212 0 2988200 1913300 1074900 21156 746 8011 8194 33183;33184 33184 LHIFNAK 7 1 0 Unmodified _LHIFNAK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.7474 2 421.747788 841.481023 93866.52 0.81785 0.00034493 0.25484 0.00010748 1.0727 0.0004524 421.747738476183 425.754804297178 35.231 0.92774 35.231 34.939 35.867 0 277 82 5 0 0 0 0.023416 2 17916 91.093 34.671 1 0.89259 1.0059 0 60212000 30585000 29627000 21157 528 8012 8195 33185;33186 33185 LHIFNAK 7 1 0 Unmodified _LHIFNAK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 421.7478 2 421.747788 841.481023 92980.7 -0.38827 -0.00016375 0.59592 0.00025133 0.20766 8.7579E-05 421.7479419885 425.75498950151 41.351 1.0495 41.351 40.896 41.946 3.8147E-06 287 80 6 0 0 0 0.050667 1 19138 54.765 20.06 1 1.0019 0.77978 0 12408000 6133500 6274400 21158 528 8012 8195 33187 33187 LHIIEVGTPPTGNQPFPK 18 1 0 Unmodified _LHIIEVGTPPTGNQPFPK_ 0 0 0 A0A087WVQ6;Q00610 A0A087WVQ6 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.0284 3 649.022909 1944.0469 NaN NaN NaN -0.073545 -4.7733E-05 NaN NaN NaN NaN 90.221 0.56566 90.221 89.942 90.507 0 0 0 0 0.00015569 2 55790 58.83 47.274 1 NaN NaN 0 13644000 0 13644000 21159 419 8013 8196 33188;33189 33188 LHILASGADVTSANAK 16 1 0 Unmodified _LHILASGADVTSANAK_ 0 0 0 D3DS96;Q9NRL2;Q59G54;A0A087WWN7 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.9575 3 523.286133 1566.83657 NaN NaN NaN 0.112 5.861E-05 NaN NaN NaN NaN 53.863 0.46563 53.863 53.746 54.212 0 0 0 0 0.00042329 1 30802 63.754 51.486 1 NaN NaN 0 13849000 0 13849000 21160 1187 8014 8197 33190 33190 LHILASGADVTSANAK 16 1 0 Unmodified _LHILASGADVTSANAK_ 0 0 0 D3DS96;Q9NRL2;Q59G54;A0A087WWN7 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.9575 3 523.286133 1566.83657 NaN NaN NaN -0.17592 -9.2058E-05 NaN NaN NaN NaN 64.265 0.55664 64.265 64.033 64.59 0 0 0 0 0.014712 1 33058 34.851 27.127 1 NaN NaN 0 2549700 0 2549700 21161 1187 8014 8197 33191 33191 LHISPSNMTNQNTNEYLEK 19 1 0 Oxidation (M) _LHISPSNM(ox)TNQNTNEYLEK_ LHISPSNM(1)TNQNTNEYLEK LHISPSNM(50.4)TNQNTNEYLEK 0 1 0 Q6IT96;Q13547;Q5HYD4 Q6IT96 Q6IT96 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.3562 3 750.354947 2248.04301 69709.27 0.72477 0.00054384 0.16989 0.00012748 0.89466 0.00067131 750.689383818484 753.026387039148 51.613 0.96004 51.613 51.142 52.102 0 422 84 8 0 0 0 1.0264E-05 1 28322 50.404 50.404 1 0.96038 1.0748 0 64002000 31921000 32081000 21162 1715 8015 8198 33192 33192 1545 LHISPSNMTNQNTNEYLEK 19 1 0 Oxidation (M) _LHISPSNM(ox)TNQNTNEYLEK_ LHISPSNM(1)TNQNTNEYLEK LHISPSNM(92.68)TNQNTNEYLEK 0 1 0 Q6IT96;Q13547;Q5HYD4 Q6IT96 Q6IT96 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.3621 3 750.354947 2248.04301 69269.15 0.74357 0.00055794 -0.0036279 -2.7222E-06 0.73994 0.00055522 750.355445222352 753.02633227229 50.036 0.84755 50.036 49.555 50.402 0 439 73 7 0 0 0 9.5137E-09 3 28010 92.679 92.679 1 1.0067 1.1339 0 58668000 26157000 32511000 21163 1715 8015 8198 33193;33194;33195 33193 1545 LHISPSNMTNQNTNEYLEK 19 1 0 Unmodified _LHISPSNMTNQNTNEYLEK_ 0 0 0 Q6IT96;Q13547;Q5HYD4 Q6IT96 Q6IT96 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.0297 3 745.023308 2232.0481 71401.05 0.75272 0.00056079 0.15192 0.00011318 0.90464 0.00067398 745.023999744922 748.028871296135 78.966 0.64909 78.966 78.725 79.374 0 144 36 8 0 0 0 0.0096094 1 42516 22.709 22.709 1 1.8623 1.446 0 3566400 1468200 2098200 21164 1715 8015 8199 33196 33196 LHISPSNMTNQNTPEYMEK 19 1 0 2 Oxidation (M) _LHISPSNM(ox)TNQNTPEYM(ox)EK_ LHISPSNM(1)TNQNTPEYM(1)EK LHISPSNM(52.18)TNQNTPEYM(52.18)EK 0 2 0 Q92769;B3KUJ5;Q59GB9 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.6811 3 756.00867 2265.00418 NaN NaN NaN -0.38051 -0.00028767 NaN NaN NaN NaN 39.357 0.7623 39.357 38.895 39.657 0 0 0 0 0.00021683 1 20133 52.185 49.132 1 NaN NaN 0 18189000 0 18189000 21165 1952 8016 8200 33197 33197 1797;1798 LHISPSNMTNQNTPEYMEK 19 1 0 2 Oxidation (M) _LHISPSNM(ox)TNQNTPEYM(ox)EK_ LHISPSNM(1)TNQNTPEYM(1)EK LHISPSNM(91.59)TNQNTPEYM(91.59)EK 0 2 0 Q92769;B3KUJ5;Q59GB9 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.6815 3 756.00867 2265.00418 69182.84 0.38979 0.00029469 -0.16875 -0.00012757 0.22105 0.00016711 756.343110071014 759.014584435471 37.993 0.57347 37.993 37.682 38.255 0 270 43 10 0 0 0 1.8977E-08 2 19705 91.589 91.589 1 2.0546 2.2879 0 51415000 14455000 36960000 21166 1952 8016 8200 33198;33199 33198 1797;1798 LHITIPR 7 0 1 Unmodified _LHITIPR_ 0 0 0 Q6P0N0;G5E9K5;H7C1S6 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.2691 2 425.268887 848.523222 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.782 1 58.782 58.282 59.282 0 0 0 0 0.047701 1 33386 67.035 7.394 1 21167 1849 8017 8201 33200 33200 LHITIPR 7 0 1 Unmodified _LHITIPR_ 0 0 0 Q6P0N0;G5E9K5;H7C1S6 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.2686 2 425.268887 848.523222 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.144 1 56.144 55.644 56.644 -3.8147E-06 0 0 0 0.01763 1 32257 106.85 16.01 1 21168 1849 8017 8201 33201 33201 LHIVQVVCK 9 1 0 Unmodified _LHIVQVVCK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.3277 2 548.320794 1094.62703 83424.07 0.5698 0.00031243 0.064016 3.5101E-05 0.63381 0.00034753 548.321133772207 552.327732098871 47.506 0.50397 47.506 47.226 47.73 0 79 29 4 0 0 0 0.0021437 2 26451 89.296 89.296 1 1.926 2.0763 0 38021000 12031000 25991000 21169 1362 8018 8202 33202;33203 33202 LHLAIPTR 8 0 1 Unmodified _LHLAIPTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.7919 2 460.787444 919.560336 88563.74 0.55075 0.00025378 -0.16407 -7.5603E-05 0.38668 0.00017818 460.787330375663 465.791372770905 59.484 0.74892 59.484 59.337 60.086 0 193 61 7 0 0 0 0.012282 1 33879 67.981 41.019 1 1.1838 1.399 0 254700000 101010000 153690000 21170 1183 8019 8203 33204 33204 LHLAIPTR 8 0 1 Unmodified _LHLAIPTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 307.5273 3 307.527388 919.560336 112728.7 0.38651 0.00011886 -0.11406 -3.5077E-05 0.27245 8.3786E-05 307.52727537945 310.863381011549 59.477 0.35624 59.477 59.393 59.749 0 73 27 5 0 0 0 0.0019544 3 33891 76.035 45.531 1 1.4072 1.4521 0 24098000 10545000 13553000 21171 1183 8019 8203 33205;33206;33207 33207 LHLAIPTR 8 0 1 Unmodified _LHLAIPTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.7876 2 460.787444 919.560336 88007.61 0.37601 0.00017326 -0.48913 -0.00022539 -0.11312 -5.2125E-05 460.787131665125 465.791299745442 58.245 0.43867 58.245 57.99 58.428 3.8147E-06 153 30 8 0 0 0 0.00053034 2 33825 131.04 66.26 1 1.1411 1.3268 0 387200000 177750000 209450000 21172 1183 8019 8203 33208;33209 33209 LHLAIPTR 8 0 1 Unmodified _LHLAIPTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 307.5273 3 307.527388 919.560336 109500.5 0.40316 0.00012398 -0.17713 -5.4471E-05 0.22603 6.951E-05 307.527258387023 310.86336953111 58.238 0.29636 58.238 58.033 58.329 0 77 21 5 0 0 0 0.0036129 2 33756 58.194 33.343 1 1.2834 1.413 0 41019000 17101000 23918000 21173 1183 8019 8203 33210;33211 33211 LHLAIPTR 8 0 1 Unmodified _LHLAIPTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 465.7912 2 460.787444 919.560336 89231.23 0.14909 6.8699E-05 -0.57654 -0.00026566 -0.42745 -0.00019696 460.786965459732 465.791303886245 69.218 0.61646 69.218 68.905 69.521 0 201 40 8 0 0 0 0.013465 1 36190 65.252 33.963 1 1.4713 1.253 0 35808000 14553000 21256000 21174 1183 8019 8203 33212 33212 LHLAIPTR 8 0 1 Unmodified _LHLAIPTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 310.8636 3 307.527388 919.560336 108968 -0.19699 -6.058E-05 0.016088 4.9476E-06 -0.1809 -5.5632E-05 307.527387015498 310.863429331563 69.226 0.38898 69.226 69.046 69.434 0 70 24 4 0 0 0 0.054801 2 36222 19.094 12.199 1 1.5147 1.2685 0 3179300 1317500 1861800 21175 1183 8019 8203 33213;33214 33213 LHLAIPTR 8 0 1 Unmodified _LHLAIPTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 465.7911 2 460.787444 919.560336 88953.8 0.14473 6.669E-05 -0.52328 -0.00024112 -0.37855 -0.00017443 460.786987155724 465.791295229439 69.51 0.8219 69.51 69.141 69.963 0 262 56 8 0 0 0 0.013465 1 35537 65.252 33.963 1 1.4727 1.2847 0 27935000 11045000 16890000 21176 1183 8019 8203 33215 33215 LHLAIPTRR 9 0 2 Unmodified _LHLAIPTRR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 366.2332 3 359.561092 1075.66145 97234.75 -0.10559 -3.7966E-05 0.13164 4.7332E-05 0.026047 9.3654E-06 359.561072222986 366.233227104842 50.83 0.53453 50.83 50.579 51.113 0 145 34 6 0 0 0 0.0072747 2 24907 48.794 30.975 1 1.5843 1.359 0 5533900 1931100 3602800 21177 1183 8020 8204 33216;33217 33216 LHLAIPTRR 9 0 2 Unmodified _LHLAIPTRR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 359.561 3 359.561092 1075.66145 100395.5 -0.25963 -9.3351E-05 0.073387 2.6387E-05 -0.18624 -6.6964E-05 359.561057964676 366.233174376277 50.213 0.87402 50.213 49.916 50.79 0 208 71 6 0 0 0 0.034621 1 24026 25.574 15.868 1 1.4366 1.2988 0 3191500 1270900 1920700 21178 1183 8020 8204 33218 33218 LHLGFIEIR 9 0 1 Unmodified _LHLGFIEIR_ 0 0 0 B3KRR1;B3KSL5;A0A0A6YYJ8;Q9Y383 B3KRR1 B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.3314 2 549.326934 1096.63931 NaN NaN NaN 1.1896 0.00065347 NaN NaN NaN NaN 104.19 0.29343 104.19 104.02 104.31 0 0 0 0 0.0059748 1 65973 73.248 32.98 1 NaN NaN 0 3405500 0 3405500 21179 494 8021 8205 33219 33219 LHLGFIEIR 9 0 1 Unmodified _LHLGFIEIR_ 0 0 0 B3KRR1;B3KSL5;A0A0A6YYJ8;Q9Y383 B3KRR1 B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.3276 2 549.326934 1096.63931 82421.23 0.94559 0.00051944 0.87723 0.00048189 1.8228 0.0010013 549.326576829428 554.832462448895 114 0.65803 114 113.6 114.25 7.6294E-06 98 29 7 0 0 0 0.016543 1 66500 53.775 26.645 1 0.3358 0.28077 0 3649800 2305400 1344400 21180 494 8021 8205 33220 33220 LHLSGIDANPNALFPPVEFPAPR 23 0 1 Unmodified _LHLSGIDANPNALFPPVEFPAPR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 825.1073 3 824.772653 2471.29613 NaN NaN NaN -0.33465 -0.00027601 NaN NaN NaN NaN 125.47 0.85187 125.47 125.29 126.15 0 0 0 0 9.354E-06 1 81629 52.541 48.731 1 NaN NaN 0 5434700 5434700 0 21181 587 8022 8206 33221 33221 LHLSGIDANPNALFPPVEFPAPR 23 0 1 Unmodified _LHLSGIDANPNALFPPVEFPAPR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.4432 3 824.772653 2471.29613 67415.37 1.2262 0.0010114 0.4516 0.00037247 1.6778 0.0013838 825.106813916307 828.444078886764 124.62 1.4243 124.62 124.04 125.47 -7.6294E-06 419 96 7 0 0 0 5.889E-07 4 82829 49.076 49.076 1 1.7379 1.712 0 14600000 4795400 9804700 21182 587 8022 8206 33222;33223;33224;33225 33222 LHLVDLAGSER 11 0 1 Unmodified _LHLVDLAGSER_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3;Q5JRK0;Q8IWH8;Q05CT3;D3DQ90;H0Y718;J3KPF9;Q2UVF2;A0A087X011;E9PES4;B4DHG8;Q17RI8;B7ZKX5;Q9Y496;Q6ZMV9 Q59HG1 Q59HG1 KIF4A;KIF4B;KIF6;KIF3A Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B;Kinesin-like protein KIF3A;Kinesin-like protein KIF6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 403.8911 3 403.891055 1208.65134 94457.65 -0.17493 -7.0652E-05 0.23639 9.5474E-05 0.061458 2.4822E-05 403.891073454502 407.227092367139 66.932 0.90743 66.932 66.465 67.373 0 306 69 6 0 0 0 0.0012534 2 38430 49.5 0 1 0.82074 0.84493 0 24828000 12136000 12692000 21183 1803 8023 8207 33226;33227 33226 LHLVDLAGSER 11 0 1 Unmodified _LHLVDLAGSER_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3;Q5JRK0;Q8IWH8;Q05CT3;D3DQ90;H0Y718;J3KPF9;Q2UVF2;A0A087X011;E9PES4;B4DHG8;Q17RI8;B7ZKX5;Q9Y496;Q6ZMV9 Q59HG1 Q59HG1 KIF4A;KIF4B;KIF6;KIF3A Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B;Kinesin-like protein KIF3A;Kinesin-like protein KIF6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.338 2 605.332944 1208.65134 77315.19 0.47039 0.00028474 -0.27397 -0.00016584 0.19642 0.0001189 605.332599565633 610.337134815689 64.077 1.1979 64.077 63.45 64.648 0 520 110 6 0 0 0 0.00022817 3 37632 91.584 0 1 0.86019 0.98109 0 49867000 27886000 21980000 21184 1803 8023 8207 33228;33229;33230 33229 LHLVDLAGSER 11 0 1 Unmodified _LHLVDLAGSER_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3;Q5JRK0;Q8IWH8;Q05CT3;D3DQ90;H0Y718;J3KPF9;Q2UVF2;A0A087X011;E9PES4;B4DHG8;Q17RI8;B7ZKX5;Q9Y496;Q6ZMV9 Q59HG1 Q59HG1 KIF4A;KIF4B;KIF6;KIF3A Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B;Kinesin-like protein KIF3A;Kinesin-like protein KIF6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 403.8908 3 403.891055 1208.65134 94424.18 0.028025 1.1319E-05 0.11901 4.8067E-05 0.14704 5.9386E-05 403.890964615174 407.227164960933 64.051 1.2897 64.051 63.411 64.701 0 429 118 6 0 0 0 0.00047807 2 37661 55.401 0 1 0.8344 0.87603 0 22953000 12752000 10201000 21185 1803 8023 8207 33231;33232 33232 LHLVDLAGSER 11 0 1 Unmodified _LHLVDLAGSER_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3;Q5JRK0;Q8IWH8;Q05CT3;D3DQ90;H0Y718;J3KPF9;Q2UVF2;A0A087X011;E9PES4;B4DHG8;Q17RI8;B7ZKX5;Q9Y496;Q6ZMV9 Q59HG1 Q59HG1 KIF4A;KIF4B;KIF6;KIF3A Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B;Kinesin-like protein KIF3A;Kinesin-like protein KIF6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.3375 2 605.332944 1208.65134 77866.1 0.59776 0.00036184 -0.044883 -2.7169E-05 0.55287 0.00033467 605.332848543506 610.337035678416 74.579 1.2185 74.579 74.057 75.276 -7.6294E-06 418 86 8 0 0 0 0.0073354 1 39445 52.79 0 1 1.4071 1.1538 0 16874000 7001500 9872800 21186 1803 8023 8207 33233 33233 LHLVDLAGSER 11 0 1 Unmodified _LHLVDLAGSER_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3;Q5JRK0;Q8IWH8;Q05CT3;D3DQ90;H0Y718;J3KPF9;Q2UVF2;A0A087X011;E9PES4;B4DHG8;Q17RI8;B7ZKX5;Q9Y496;Q6ZMV9 Q59HG1 Q59HG1 KIF4A;KIF4B;KIF6;KIF3A Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B;Kinesin-like protein KIF3A;Kinesin-like protein KIF6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.3373 2 605.332944 1208.65134 78172.27 0.4242 0.00025678 -0.038088 -2.3056E-05 0.38611 0.00023372 605.332791929356 610.337058657345 74.631 1.2661 74.631 74.144 75.41 0 380 83 8 0 0 0 0.003118 2 38711 60.398 0 1 1.4235 1.1631 0 13047000 5631100 7415800 21187 1803 8023 8207 33234;33235 33235 LHLVPAEK 8 1 0 Unmodified _LHLVPAEK_ 0 0 0 B9EGR5;Q8IWI9;H3BP52;H3BTF4 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.7734 2 453.774003 905.533452 91321.16 0.053991 2.45E-05 0.066332 3.01E-05 0.12032 5.46E-05 453.773972585332 457.780973059032 35.392 0.19384 35.392 35.284 35.478 0 57 17 4 0 0 0 0.0053395 1 17765 90.777 71.417 1 0.73787 0.7703 0 12195000 7153200 5041700 21188 1121 8024 8208 33236 33236 LHNAIEGGTQLSR 13 0 1 Unmodified _LHNAIEGGTQLSR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.9159 3 465.916152 1394.72663 NaN NaN NaN -0.62134 -0.00028949 NaN NaN NaN NaN 31.079 0.85016 31.079 30.631 31.482 1.9073E-06 0 0 0 0.00046705 1 15291 59.248 45.834 1 NaN NaN 0 45999000 45999000 0 21189 1398 8025 8209 33237 33237 LHNAIEGGTQLSR 13 0 1 Unmodified _LHNAIEGGTQLSR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3749 2 698.370589 1394.72663 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.763 1 30.763 30.263 31.263 1.9073E-06 0 0 0 0.0053372 1 15089 57.348 24.508 1 21190 1398 8025 8209 33238 33238 LHNAIEGGTQLSR 13 0 1 Unmodified _LHNAIEGGTQLSR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.3702 2 698.370589 1394.72663 73264.02 1.3166 0.00091944 -0.32411 -0.00022635 0.99245 0.0006931 698.370408418326 703.374329526557 29.97 0.52591 29.97 29.64 30.166 0 181 40 7 0 0 0 0.00010883 2 14460 114.76 114.76 1 0.80052 0.89743 0 45316000 27478000 17838000 21191 1398 8025 8209 33239;33240 33239 LHNAIEGGTQLSR 13 0 1 Unmodified _LHNAIEGGTQLSR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.2522 3 465.916152 1394.72663 87512.79 0.82894 0.00038622 -0.32853 -0.00015307 0.50041 0.00023315 465.915994616812 469.252076632608 29.925 0.85551 29.925 29.591 30.446 -1.9073E-06 312 66 7 0 0 0 1.4918E-06 2 14526 106.58 106.58 1 0.84418 0.96084 0 111950000 59311000 52635000 21192 1398 8025 8209 33241;33242 33242 LHNAIEGGTQLSR 13 0 1 Unmodified _LHNAIEGGTQLSR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 469.2513 3 465.916152 1394.72663 86157.02 0.20703 9.6456E-05 -0.57212 -0.00026656 -0.36509 -0.0001701 465.915923306293 469.251724546624 34.976 1.0859 34.976 34.647 35.733 0 365 94 7 0 0 0 0.0061467 1 15454 35.763 35.763 1 0.62849 0.52633 0 10195000 5614800 4580200 21193 1398 8025 8209 33243 33243 LHNAIEGGTQLSR 13 0 1 Unmodified _LHNAIEGGTQLSR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.2498 3 465.916152 1394.72663 87793.59 0.38093 0.00017748 -0.64321 -0.00029968 -0.26228 -0.0001222 466.250034298208 469.251716116511 34.978 1.0116 34.978 34.631 35.643 0 298 84 7 0 0 0 0.042267 1 14916 20.279 20.279 1 0.64355 0.52371 0 9759600 5743800 4015800 21194 1398 8025 8209 33244 33244 LHNELQSGSLR 11 0 1 Unmodified _LHNELQSGSLR_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 421.8943 3 418.558076 1252.6524 90899.13 0.38234 0.00016003 -0.12126 -5.0756E-05 0.26108 0.00010928 418.558266207576 421.893694499031 28.23 0.42055 28.23 28.092 28.513 0 102 29 8 0 0 0 0.0001059 1 13253 71.555 54.613 1 1.2774 1.3959 0 52253000 23747000 28506000 21195 907 8026 8210 33245 33245 LHNELQSGSLR 11 0 1 Unmodified _LHNELQSGSLR_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.339 2 627.333476 1252.6524 NaN NaN NaN 0.076961 4.828E-05 NaN NaN NaN NaN 28.201 0.21222 28.201 28.132 28.344 0 0 0 0 5.6163E-31 1 13249 166.97 127.67 1 NaN NaN 0 31740000 0 31740000 21196 907 8026 8210 33246 33246 LHNELQSGSLR 11 0 1 Unmodified _LHNELQSGSLR_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.5577 3 418.558076 1252.6524 91796.19 -0.00503 -2.1053E-06 -0.63809 -0.00026708 -0.64312 -0.00026918 418.55790064176 421.893728689634 27.35 0.3718 27.35 27.167 27.539 0 89 19 8 0 0 0 0.0020051 1 12604 54.27 41.262 1 1.3336 1.5286 0 82801000 35030000 47771000 21197 907 8026 8210 33247 33247 LHNELQSGSLR 11 0 1 Unmodified _LHNELQSGSLR_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.3379 2 627.333476 1252.6524 NaN NaN NaN -0.83847 -0.000526 NaN NaN NaN NaN 27.298 0.31543 27.298 27.167 27.483 0 0 0 0 4.2294E-40 1 12617 173.24 130.37 1 NaN NaN 0 33891000 0 33891000 21198 907 8026 8210 33248 33248 LHNELQSGSLR 11 0 1 Unmodified _LHNELQSGSLR_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3378 2 627.333476 1252.6524 75156.38 0.33968 0.00021309 -0.13381 -8.3941E-05 0.20587 0.00012915 627.333112745082 632.337778277515 32.02 0.44339 32.02 31.85 32.293 0 90 23 7 0 0 0 0.0017885 2 13633 67.113 54.815 1 1.2853 1.1057 0 6939000 3189400 3749600 21199 907 8026 8210 33249;33250 33249 LHNELQSGSLR 11 0 1 Unmodified _LHNELQSGSLR_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 421.8941 3 418.558076 1252.6524 90723.37 -0.47045 -0.00019691 0.50507 0.0002114 0.034623 1.4492E-05 418.558280716341 421.894321585067 32.035 0.34143 32.035 31.871 32.212 0 83 18 7 0 0 0 0.0013268 1 13680 44.614 36.544 1 1.3183 1.1105 0 9751000 4163700 5587200 21200 907 8026 8210 33251 33251 LHNELQSGSLR 11 0 1 Unmodified _LHNELQSGSLR_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 421.8943 3 418.558076 1252.6524 92374.04 -0.35479 -0.0001485 0.18888 7.9056E-05 -0.16591 -6.9443E-05 418.558127425906 421.894190524853 31.923 0.38731 31.923 31.777 32.164 0 93 20 7 0 0 0 0.00048023 1 13117 51.979 43.579 1 1.3067 1.0832 0 7835700 3167100 4668600 21201 907 8026 8210 33252 33252 LHNELQSGSLR 11 0 1 Unmodified _LHNELQSGSLR_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.3378 2 627.333476 1252.6524 NaN NaN NaN -0.49704 -0.00031181 NaN NaN NaN NaN 31.918 0.34752 31.918 31.777 32.124 0 0 0 0 0.0015593 1 13108 82.417 66.219 1 NaN NaN 0 2773400 0 2773400 21202 907 8026 8210 33253 33253 LHNQLQELK 9 1 0 Unmodified _LHNQLQELK_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.824 2 561.81693 1121.61931 83384.86 0.55254 0.00031042 -0.49222 -0.00027654 0.060321 3.389E-05 561.81654330617 565.82394905401 32.262 0.27162 32.262 32.146 32.418 0 44 14 4 0 0 0 0.017549 1 13380 52.867 25.613 1 1.2045 1.0199 0 1461500 593710 867830 21203 371 8027 8211 33254 33254 LHNQQALSSSIEEGLR 16 0 1 Unmodified _LHNQQALSSSIEEGLR_ 0 0 0 A0A024RCR9;Q06587;B4DVB5;B4DW57 A0A024RCR9 A0A024RCR9 RING1 E3 ubiquitin-protein ligase RING1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.3079 3 594.642868 1780.90677 83786.41 0.51726 0.00030758 -0.4926 -0.00029292 0.024659 1.4663E-05 594.642334368774 597.978881635906 60.901 0.7224 60.901 60.5 61.222 0 156 65 4 0 0 0 0.0014719 1 35710 53.565 53.565 1 1.0323 1.0467 0 20219000 9993400 10225000 21204 369 8028 8212 33255 33255 LHNQQALSSSIEEGLR 16 0 1 Unmodified _LHNQQALSSSIEEGLR_ 0 0 0 A0A024RCR9;Q06587;B4DVB5;B4DW57 A0A024RCR9 A0A024RCR9 RING1 E3 ubiquitin-protein ligase RING1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.6423 3 594.642868 1780.90677 NaN NaN NaN -0.74956 -0.00044572 NaN NaN NaN NaN 72.409 0.46085 72.409 72.152 72.612 0 0 0 0 0.014846 1 37382 29.58 24.689 1 NaN NaN 0 1803000 1803000 0 21205 369 8028 8212 33256 33256 LHNSLIGTK 9 1 0 Unmodified _LHNSLIGTK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3;H7C2D1 A0A024R4E5 A0A024R4E5 HDLBP Vigilin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 330.8658 3 328.194186 981.56073 NaN NaN NaN 0.51807 0.00017003 NaN NaN NaN NaN 25.646 0.083855 25.646 25.607 25.69 0 0 0 0 0.03501 1 11277 35.908 24.687 1 NaN NaN 0 2389900 0 2389900 21206 154 8029 8213 33257 33257 LHPEMSNLDLTK 12 1 0 Oxidation (M) _LHPEM(ox)SNLDLTK_ LHPEM(1)SNLDLTK LHPEM(89.17)SNLDLTK 0 1 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.3628 2 707.355759 1412.69697 69793.4 0.64394 0.00045549 -0.38727 -0.00027394 0.25667 0.00018156 707.355491047541 711.362820293097 40.176 0.51997 40.176 40.013 40.533 0 248 44 8 0 0 0 0.00010319 2 21000 89.171 78.007 1 0.80794 0.91266 0 140150000 77402000 62751000 21207 1244 8030 8214 33258;33259 33259 951 LHPEMSNLDLTK 12 1 0 Oxidation (M) _LHPEM(ox)SNLDLTK_ LHPEM(1)SNLDLTK LHPEM(85.27)SNLDLTK 0 1 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.9059 3 471.906265 1412.69697 85146.67 0.22372 0.00010557 -0.24844 -0.00011724 -0.024728 -1.1669E-05 471.906205173476 474.577560117087 40.183 0.57486 40.183 39.991 40.565 0 283 49 8 0 0 0 5.8802E-05 1 20970 85.274 65.055 1 0.90868 1.0286 0 100830000 50155000 50678000 21208 1244 8030 8214 33260 33260 951 LHPEMSNLDLTK 12 1 0 Oxidation (M) _LHPEM(ox)SNLDLTK_ LHPEM(1)SNLDLTK LHPEM(66.49)SNLDLTK 0 1 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.3558 2 707.355759 1412.69697 70853.54 0.54904 0.00038837 0.17451 0.00012344 0.72355 0.0005118 707.356356584113 711.363130007762 38.953 0.92668 38.953 38.511 39.438 0 335 81 7 0 0 0 0.00035938 1 20454 66.486 55.963 1 0.90692 1.0187 0 116970000 59871000 57096000 21209 1244 8030 8214 33261 33261 951 LHPEMSNLDLTK 12 1 0 Oxidation (M) _LHPEM(ox)SNLDLTK_ LHPEM(1)SNLDLTK LHPEM(41.4)SNLDLTK 0 1 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.5778 3 471.906265 1412.69697 86827.86 0.12356 5.8309E-05 -0.11698 -5.5206E-05 0.0065765 3.1035E-06 471.906243733889 474.577690553577 38.985 0.70684 38.985 38.643 39.35 0 335 60 8 0 0 0 0.004447 1 20512 41.401 36.247 1 0.97279 1.0871 0 95757000 46610000 49147000 21210 1244 8030 8214 33262 33262 951 LHPFHVIR 8 0 1 Unmodified _LHPFHVIR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;H7C2U2;X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 343.5387 3 340.203016 1017.58722 101905.8 -0.063462 -2.159E-05 0.084723 2.8823E-05 0.021261 7.2331E-06 340.20297703951 343.539021536538 43.45 2.0613 43.45 43.22 45.282 0 609 146 8 0 0 0 0.0087905 2 20411 53.166 53.166 1 1.0983 0.8956 0 15324000 6380400 8943700 21211 1524;1266 8031 8215 33263;33264 33263 LHPFHVIR 8 0 1 Unmodified _LHPFHVIR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;H7C2U2;X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 343.5388 3 340.203016 1017.58722 102593.5 -0.30632 -0.00010421 0.24299 8.2666E-05 -0.063327 -2.1544E-05 340.203073448497 343.539075458143 40.926 2.0991 40.926 40.752 42.851 0 589 157 7 0 0 0 0.019888 1 18342 38.419 38.419 1 1.0223 0.84415 0 14532000 6550200 7982000 21212 1524;1266 8031 8215 33265 33265 LHPGELADTPK 11 1 0 Unmodified _LHPGELADTPK_ 0 0 0 Q9Y483;Q96G26;B4DZG1;B4DZ69 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.3213 2 589.31422 1176.61389 78675.94 0.83125 0.00048987 -0.22516 -0.00013269 0.60608 0.00035717 589.314055060138 593.320984846373 31.901 0.61043 31.901 31.691 32.301 0 174 59 4 0 0 0 0.0073711 2 15727 52.725 43.331 1 1.0775 1.0561 0 20854000 10065000 10788000 21213 2143 8032 8216 33266;33267 33266 LHPGELADTPK 11 1 0 Unmodified _LHPGELADTPK_ 0 0 0 Q9Y483;Q96G26;B4DZG1;B4DZ69 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.3154 2 589.31422 1176.61389 79813.35 0.63522 0.00037435 -0.059609 -3.5128E-05 0.57562 0.00033922 589.314284825804 593.321315128749 30.747 0.41665 30.747 30.488 30.905 0 112 36 4 0 0 0 0.0031487 2 15075 60.342 60.342 1 0.98546 1.0821 0 41649000 22452000 19197000 21214 2143 8032 8216 33268;33269 33268 LHPVILASIVDSYER 15 0 1 Unmodified _LHPVILASIVDSYER_ 0 0 0 B4DMT5;B3KSH1;O00303;E9PQV8 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.6546 3 571.317433 1710.93047 NaN NaN NaN 0.087853 5.0192E-05 NaN NaN NaN NaN 110.06 0.25811 110.06 109.88 110.14 0 0 0 0 0.00012882 1 69020 73.022 65.82 1 NaN NaN 0 11566000 0 11566000 21215 939 8033 8217 33270 33270 LHPVILASIVDSYER 15 0 1 Unmodified _LHPVILASIVDSYER_ 0 0 0 B4DMT5;B3KSH1;O00303;E9PQV8 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.6541 3 571.317433 1710.93047 NaN NaN NaN -0.18695 -0.00010681 NaN NaN NaN NaN 108.82 0.82949 108.82 108.34 109.17 -7.6294E-06 0 0 0 0.0006164 1 69642 64.104 57.222 1 NaN NaN 0 7832100 0 7832100 21216 939 8033 8217 33271 33271 LHPVILASIVDSYER 15 0 1 Unmodified _LHPVILASIVDSYER_ 0 0 0 B4DMT5;B3KSH1;O00303;E9PQV8 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.3181 3 571.317433 1710.93047 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.82 1 108.82 108.32 109.32 7.6294E-06 0 0 0 0.0040459 1 69733 54.09 44.033 1 21217 939 8033 8217 33272 33272 LHSFESHK 8 1 0 Unmodified _LHSFESHK_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.7563 2 492.748516 983.482479 89004.17 0.42662 0.00021021 0.63547 0.00031313 1.0621 0.00052334 492.748985764701 496.755782130014 16.235 0.57814 16.235 16.052 16.63 0 92 30 4 0 0 0 0.0082471 1 3632 79.451 69.037 1 0.81177 0.81705 0 7258700 3932400 3326400 21218 1695 8034 8218 33273 33273 LHSIILANPQDNENFIATVR 20 0 1 Unmodified _LHSIILANPQDNENFIATVR_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.0726 3 755.73772 2264.19133 70519.8 0.71935 0.00054364 0.1933 0.00014609 0.91265 0.00068972 756.071924122537 759.408256237944 104.52 0.88148 104.52 104 104.88 0 344 72 8 0 0 0 1.5314E-06 2 64588 57.366 57.366 1 0.79465 0.79869 0 17300000 10300000 7000500 21219 1005 8035 8219 33274;33275 33275 LHSIILANPQDNENFIATVR 20 0 1 Unmodified _LHSIILANPQDNENFIATVR_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.4089 3 755.73772 2264.19133 71103.52 0.73022 0.00055186 -0.091941 -6.9483E-05 0.63828 0.00048237 756.405789410092 759.408251830434 103.08 0.79233 103.08 102.62 103.42 0 327 63 7 0 0 0 0.0013533 1 65010 29.842 29.842 1 1.0064 1.1057 0 40540000 17315000 23225000 21220 1005 8035 8219 33276 33276 LHSIILANPQDNENFIATVR 20 0 1 Unmodified _LHSIILANPQDNENFIATVR_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 759.075 3 755.73772 2264.19133 70777.7 0.90911 0.00068705 -0.23183 -0.0001752 0.67728 0.00051185 756.071941009398 759.408130898463 114.68 0.74451 114.68 114.33 115.08 0 134 31 9 0 0 0 3.6136E-07 2 67012 76.704 76.704 1 1.03 0.84415 0 16717000 7906700 8809900 21221 1005 8035 8219 33277;33278 33278 LHSIILANPQDNENFIATVR 20 0 1 Unmodified _LHSIILANPQDNENFIATVR_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.0742 3 755.73772 2264.19133 71073.23 0.69203 0.00052299 -0.21613 -0.00016334 0.4759 0.00035965 756.072029169683 759.072937795522 114.46 0.58942 114.46 114.3 114.89 7.6294E-06 129 25 8 0 0 0 8.3431E-10 2 65958 96.562 96.562 1 0.9782 0.79289 0 10296000 5605100 4691000 21222 1005 8035 8219 33279;33280 33280 LHSYSSPSTK 10 1 0 Unmodified _LHSYSSPSTK_ 0 0 0 A0A087WWP4;Q96T37 A0A087WWP4 A0A087WWP4 RBM15 Putative RNA-binding protein 15 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.7849 2 553.77747 1105.54039 NaN NaN NaN 0.94053 0.00052085 NaN NaN NaN NaN 16.474 0.12947 16.474 16.406 16.535 0 0 0 0 0.014744 1 3820 58.433 38.797 1 NaN NaN 0 1729500 0 1729500 21223 427 8036 8220 33281 33281 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.7563 2 499.756341 997.498129 85411.05 -0.25093 -0.00012541 0.90468 0.00045212 0.65374 0.00032671 499.75675376425 503.763775511496 15.799 0.48988 15.799 15.639 16.129 -9.5367E-07 193 42 6 0 0 0 0.011754 1 3270 69.198 69.198 1 0.98081 0.9879 0 7220500 3547700 3672800 21224 1771 8037 8221 33282 33282 LHTLEEEK 8 1 0 Unmodified _LHTLEEEK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.7693 2 499.761289 997.508025 83496.78 0.18125 9.0581E-05 0.49056 0.00024516 0.67181 0.00033574 499.760987774433 503.768820719044 19.82 0.28011 19.82 19.721 20.001 0 36 10 5 0 0 0 8.317E-14 2 6323 163.9 94.513 1 0.89597 0.96892 0 36314000 16277000 20036000 21225 803 8038 8222 33283;33284 33284 LHTLEEEK 8 1 0 Unmodified _LHTLEEEK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.7613 2 499.761289 997.508025 84209.13 -0.19898 -9.9441E-05 0.30997 0.00015491 0.11099 5.5469E-05 499.760934205257 503.768795406188 19.37 0.38495 19.37 19.164 19.549 1.9073E-06 52 14 5 0 0 0 5.3891E-30 2 5771 198.07 116.69 1 1.1478 1.2102 0 19915000 10096000 9818300 21226 803 8038 8222 33285;33286 33285 LHTLEEEK 8 1 0 Unmodified _LHTLEEEK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 503.7683 2 499.761289 997.508025 NaN NaN NaN 0.56144 0.00028058 NaN NaN NaN NaN 20.379 0.21802 20.379 20.265 20.483 0 0 0 0 0.0029139 1 5335 105.81 55.769 1 NaN NaN 0 2140500 0 2140500 21227 803 8038 8222 33287 33287 LHVAILER 8 0 1 Unmodified _LHVAILER_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.7971 2 475.792727 949.5709 90982.7 0.24286 0.00011555 0.080434 3.827E-05 0.32329 0.00015382 475.792731797605 480.796824220075 56.774 0.68504 56.774 56.499 57.184 0 160 50 5 0 0 0 0.008243 1 32772 79.469 45.918 1 1.4466 1.4999 0 21882000 7955000 13927000 21228 1754 8039 8223 33288 33288 LHVDPENFR 9 0 1 Unmodified _LHVDPENFR_ 0 0 0 CON__Q3SX09;Q4TZM4;Q9BWU5;Q8IZI0;Q8IUL9;Q6V0K9;Q6J1Z7;Q670S4;Q52MT0;Q4F786;Q3LR79;Q0Z944;E9NGZ5;D1MGQ0;B3VL05;B2M1S8;Q9BWV6;Q9GZL9;Q9UK54;B3VL86;E9PFT6;D9YZU5;C8C504;A0N071;Q14473;P68871;P02042;Q5XTR9;Q3Y9I8;Q4TWB7;Q4JLR8;B2M1S6;A1YZ08;A0A1B4WRL5 CON__Q3SX09 CON__Q3SX09 HBB;HBD;HBD/HBB Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 376.1927 3 376.192845 1125.55671 NaN NaN NaN -0.21056 -7.9213E-05 NaN NaN NaN NaN 48.944 0.61303 48.944 48.703 49.316 0 0 0 0 6.515E-06 1 26700 94.114 76.129 1 NaN NaN 0 38954000 38954000 0 + 21229 1172 8040 8224 33289 33289 LHVDPENFR 9 0 1 Unmodified _LHVDPENFR_ 0 0 0 CON__Q3SX09;Q4TZM4;Q9BWU5;Q8IZI0;Q8IUL9;Q6V0K9;Q6J1Z7;Q670S4;Q52MT0;Q4F786;Q3LR79;Q0Z944;E9NGZ5;D1MGQ0;B3VL05;B2M1S8;Q9BWV6;Q9GZL9;Q9UK54;B3VL86;E9PFT6;D9YZU5;C8C504;A0N071;Q14473;P68871;P02042;Q5XTR9;Q3Y9I8;Q4TWB7;Q4JLR8;B2M1S6;A1YZ08;A0A1B4WRL5 CON__Q3SX09 CON__Q3SX09 HBB;HBD;HBD/HBB Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.7859 2 563.78563 1125.55671 NaN NaN NaN 0.55144 0.00031089 NaN NaN NaN NaN 47.092 0.86241 47.092 46.768 47.63 -3.8147E-06 0 0 0 0.0027333 1 26005 79.906 68.138 1 NaN NaN 0 236840000 236840000 0 + 21230 1172 8040 8224 33290 33290 LHVDPENFR 9 0 1 Unmodified _LHVDPENFR_ 0 0 0 CON__Q3SX09;Q4TZM4;Q9BWU5;Q8IZI0;Q8IUL9;Q6V0K9;Q6J1Z7;Q670S4;Q52MT0;Q4F786;Q3LR79;Q0Z944;E9NGZ5;D1MGQ0;B3VL05;B2M1S8;Q9BWV6;Q9GZL9;Q9UK54;B3VL86;E9PFT6;D9YZU5;C8C504;A0N071;Q14473;P68871;P02042;Q5XTR9;Q3Y9I8;Q4TWB7;Q4JLR8;B2M1S6;A1YZ08;A0A1B4WRL5 CON__Q3SX09 CON__Q3SX09 HBB;HBD;HBD/HBB Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 376.1925 3 376.192845 1125.55671 NaN NaN NaN -0.16137 -6.0706E-05 NaN NaN NaN NaN 47.111 0.59196 47.111 46.882 47.474 0 0 0 0 4.0235E-05 1 26015 82.452 69.361 1 NaN NaN 0 52574000 52574000 0 + 21231 1172 8040 8224 33291 33291 LHVEVAK 7 1 0 Unmodified _LHVEVAK_ 0 0 0 O43719;B4DRS4;Q5H919;Q5H918 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 398.2397 2 398.239796 794.465038 96985.61 -0.072031 -2.8685E-05 -0.058373 -2.3246E-05 -0.1304 -5.1932E-05 398.239649881692 402.246716968384 25.935 0.30602 25.935 25.808 26.114 1.9073E-06 42 12 6 0 0 0 0.059659 1 9649 50.632 1.8712 1 0.72731 0.57539 0 3037900 1708900 1329000 21232 1388 8041 8225 33292 33292 LHVEYNK 7 1 0 Unmodified _LHVEYNK_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.7403 2 451.74016 901.465767 92295.76 0.12933 5.8422E-05 0.051968 2.3476E-05 0.18129 8.1898E-05 451.740253824121 455.747492085726 21.127 0.35571 21.127 20.997 21.352 -1.9073E-06 67 16 8 0 0 0 0.0045875 1 7450 132.96 96.404 1 0.77567 0.82423 0 31635000 18045000 13590000 21233 590 8042 8226 33293 33293 LHVEYNK 7 1 0 Unmodified _LHVEYNK_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.7403 2 451.74016 901.465767 86419.77 0.27171 0.00012274 0.27186 0.00012281 0.54357 0.00024555 451.740257455259 455.747427463383 20.731 0.43751 20.731 20.45 20.888 0 36 13 6 0 0 0 0.012579 1 7041 105.2 74.46 1 0.65087 0.66465 0 31446000 19334000 12111000 21234 590 8042 8226 33294 33294 LHVEYNK 7 1 0 Unmodified _LHVEYNK_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 455.7469 2 451.74016 901.465767 88846.45 -0.27087 -0.00012236 -0.6056 -0.00027357 -0.87647 -0.00039594 451.740592243466 455.747332132922 22.468 0.51433 22.468 22.222 22.737 0 81 22 7 0 0 0 0.026682 2 6754 76.035 63.075 1 1.4188 1.1203 0 3919800 1525200 2394600 21235 590 8042 8226 33295;33296 33295 LHVIPR 6 0 1 Unmodified _LHVIPR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 367.7373 2 367.737223 733.459893 96586.42 0.20766 7.6366E-05 0.1468 5.3983E-05 0.35446 0.00013035 367.737139401836 372.741437281339 28.277 0.32573 28.277 28.144 28.469 0 109 22 7 0 0 0 0.034273 1 13258 112.58 42.087 1 0.69401 0.7959 0 135490000 74858000 60636000 21236 1389 8043 8227 33297 33297 LHVIPR 6 0 1 Unmodified _LHVIPR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 367.7368 2 367.737223 733.459893 98847.31 0.37327 0.00013726 -0.11308 -4.1584E-05 0.26019 9.568E-05 367.737079714471 372.741220356722 26.741 0.62732 26.741 26.54 27.167 0 117 29 8 0 0 0 0.036607 1 12057 110.63 24.994 1 0.78984 0.90863 0 207430000 114380000 93050000 21237 1389 8043 8227 33298 33298 LHVIPR 6 0 1 Unmodified _LHVIPR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 367.737 2 367.737223 733.459893 97209.31 -0.01582 -5.8176E-06 0.13844 5.0911E-05 0.12262 4.5094E-05 367.737175625987 372.74128854435 30.866 0.83261 30.866 30.659 31.492 0 187 52 7 0 0 0 0.059435 1 12843 82.141 23.885 1 1.0325 0.8538 0 19490000 9497300 9992600 21238 1389 8043 8227 33299 33299 LHVIPR 6 0 1 Unmodified _LHVIPR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 367.7373 2 367.737223 733.459893 96944.98 -0.27664 -0.00010173 0.37107 0.00013646 0.09443 3.4726E-05 367.737269305975 372.741374490808 30.16 1.0511 30.16 29.955 31.006 0 223 61 6 0 0 0 0.059435 1 11951 82.141 23.885 1 1.0651 0.89732 0 17518000 8299100 9218600 21239 1389 8043 8227 33300 33300 LHVLLFK 7 1 0 Unmodified _LHVLLFK_ 0 0 0 E9PIE3;Q969G5 E9PIE3 E9PIE3 PRKCDBP Protein kinase C delta-binding protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.2843 2 435.284006 868.553459 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.58 1 76.58 76.08 77.08 0 0 0 0 0.01285 1 46239 83.229 64.423 1 21240 1239 8044 8228 33301 33301 LHVTALDYLAPYAK 14 1 0 Unmodified _LHVTALDYLAPYAK_ 0 0 0 Q9Y221;B3KM49;J3QLW7;J3QRD6;J3QRR4 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.6243 3 525.624086 1573.85043 83236.59 0.50507 0.00026548 -0.17359 -9.1243E-05 0.33148 0.00017423 525.624077118051 528.294815842661 105.3 1.7351 105.3 104.15 105.89 0 640 138 8 0 0 0 3.6146E-05 4 65343 67.997 67.997 1 1.0605 1.176 0 58970000 26485000 32485000 21241 2119 8045 8229 33302;33303;33304;33305 33304 LHVTALDYLAPYAK 14 1 0 Unmodified _LHVTALDYLAPYAK_ 0 0 0 Q9Y221;B3KM49;J3QLW7;J3QRD6;J3QRR4 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.9401 2 787.932491 1573.85043 69750.58 0.73644 0.00058026 -1.1788 -0.00092884 -0.4424 -0.00034858 788.431228930749 791.939481864287 105.04 1.4194 105.04 104.36 105.78 0 491 114 7 0 0 0 3.3392E-05 2 64857 95.618 87.752 1 0.57178 0.63037 0 55938000 31956000 23982000 21242 2119 8045 8229 33306;33307 33306 LHVTALDYLAPYAK 14 1 0 Unmodified _LHVTALDYLAPYAK_ 0 0 0 Q9Y221;B3KM49;J3QLW7;J3QRD6;J3QRR4 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.6244 3 525.624086 1573.85043 83290.41 0.13813 7.2605E-05 0.060292 3.1691E-05 0.19842 0.0001043 525.62416018027 528.295101532571 103.41 1.5174 103.41 102.85 104.37 0 698 125 8 0 0 0 2.14E-05 3 65729 71.548 67.377 1 1.142 1.2774 0 85457000 41131000 44327000 21243 2119 8045 8229 33308;33309;33310 33310 LHVTALDYLAPYAK 14 1 0 Unmodified _LHVTALDYLAPYAK_ 0 0 0 Q9Y221;B3KM49;J3QLW7;J3QRD6;J3QRR4 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.9406 2 787.932491 1573.85043 69362.2 0.81542 0.00064249 0.18806 0.00014818 1.0035 0.00079068 788.434056860154 791.939809486203 114.85 0.77788 114.85 114.61 115.39 0 180 34 10 0 0 0 3.8228E-06 2 67081 101.39 97.053 1 1.225 0.99566 0 28827000 13343000 15484000 21244 2119 8045 8229 33311;33312 33311 LHVTALDYLAPYAK 14 1 0 Unmodified _LHVTALDYLAPYAK_ 0 0 0 Q9Y221;B3KM49;J3QLW7;J3QRD6;J3QRR4 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.296 3 525.624086 1573.85043 83115.43 0.52248 0.00027463 0.090932 4.7796E-05 0.61341 0.00032242 525.6241688256 528.295464804727 114.85 0.89915 114.85 114.61 115.51 0 231 41 9 0 0 0 4.8675E-05 3 67082 56.139 51.968 1 1.2162 0.99614 0 35733000 15070000 20663000 21245 2119 8045 8229 33313;33314;33315 33313 LHVTALDYLAPYAK 14 1 0 Unmodified _LHVTALDYLAPYAK_ 0 0 0 Q9Y221;B3KM49;J3QLW7;J3QRD6;J3QRR4 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.442 2 787.932491 1573.85043 68964.76 0.78924 0.00062187 -0.034378 -2.7087E-05 0.75486 0.00059478 787.932540816558 791.939591659741 114.62 0.80423 114.62 114.4 115.2 0 188 36 10 0 0 0 1.5425E-57 2 66004 196.88 185.98 1 1.2235 1.0086 0 29795000 13737000 16058000 21246 2119 8045 8229 33316;33317 33316 LHVTALDYLAPYAK 14 1 0 Unmodified _LHVTALDYLAPYAK_ 0 0 0 Q9Y221;B3KM49;J3QLW7;J3QRD6;J3QRR4 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.9584 3 525.624086 1573.85043 83164.11 0.49131 0.00025825 -0.082078 -4.3142E-05 0.40923 0.0002151 525.624060407295 528.295389223909 114.63 0.93285 114.63 114.4 115.33 7.6294E-06 232 43 10 0 0 0 3.3248E-05 2 66017 63.181 59.079 1 1.2537 1.038 0 33736000 15701000 18035000 21247 2119 8045 8229 33318;33319 33319 LHYAFQTEGK 10 1 0 Unmodified _LHYAFQTEGK_ 0 0 0 B4DKZ2;B4DG22;B7ZB17;P51812;B1AXG1;B1AXG2;B7Z2K7;F2Z2J1;Q15349;Q9UK32;D6RHW7;E9PMM7;D6R910;D6RA62;D6RE03;B7Z3B5;E9PAN7;E9PGT3;Q15418 B4DKZ2;E9PGT3 B4DKZ2 RPS6KA3;RPS6KA2;RPS6KA6;RPS6KA1 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase alpha-6;Ribosomal protein S6 kinase alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.3011 2 597.301113 1192.58767 82342.16 0.36716 0.00021931 0.085006 5.0774E-05 0.45217 0.00027008 597.802983004909 601.307825027243 40.547 0.28554 40.547 40.406 40.692 0 60 22 4 0 0 0 0.039394 1 18722 39.022 39.022 1 1.1418 0.96525 0 1185900 694130 491810 21248 971;1235 8046 8230 33320 33320 LHYCVSCAIHSK 12 1 0 Unmodified _LHYCVSCAIHSK_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q76N56 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8577 2 737.850121 1473.68569 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.037 1 34.037 33.537 34.537 0 0 0 0 6.4112E-11 1 16982 116.3 83.042 1 21249 319 8047 8231 33321 33321 LHYCVSCAIHSK 12 1 0 Unmodified _LHYCVSCAIHSK_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q76N56 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.9066 3 492.235839 1473.68569 85289.62 0.15942 7.8471E-05 -0.308 -0.00015161 -0.14858 -7.3138E-05 492.235895070522 494.907083960701 31.11 0.50775 31.11 30.927 31.435 0 231 43 8 0 0 0 2.9139E-05 2 15270 96.103 90.824 1 0.60892 0.68131 0 84728000 51642000 33087000 21250 319 8047 8231 33322;33323 33322 LHYCVSCAIHSK 12 1 0 Unmodified _LHYCVSCAIHSK_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q76N56 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.8505 2 737.850121 1473.68569 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.122 1 31.122 30.622 31.622 1.9073E-06 0 0 0 1.592E-06 1 15345 96.342 82.989 1 21251 319 8047 8231 33324 33324 LHYCVSCAIHSK 12 1 0 Unmodified _LHYCVSCAIHSK_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q76N56 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.9074 3 492.235839 1473.68569 82905.72 0.1834 9.0278E-05 -0.67175 -0.00033066 -0.48835 -0.00024038 492.23566285106 494.907071232831 37.561 0.77686 37.561 37.321 38.097 0 338 61 9 0 0 0 0.00044621 2 16846 61.11 55.831 1 1.3853 1.0763 0 15065000 6423300 8641900 21252 319 8047 8231 33325;33326 33325 LHYCVSCAIHSK 12 1 0 Unmodified _LHYCVSCAIHSK_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q76N56 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.907 3 492.235839 1473.68569 84863.34 0.054897 2.7022E-05 -0.52646 -0.00025914 -0.47157 -0.00023212 492.235711318217 494.907159640779 37 0.91228 37 36.771 37.684 0 384 76 9 0 0 0 7.3723E-06 2 16151 101.56 96.276 1 1.3984 1.1236 0 17115000 7228100 9887000 21253 319 8047 8231 33327;33328 33328 LHYYCEDDGK 10 1 0 Unmodified _LHYYCEDDGK_ 0 0 0 A0A024RCP3;Q12899;A2AE48;A2AE50;Q5SPU2 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.2693 2 650.269152 1298.52375 NaN NaN NaN -0.72457 -0.00047117 NaN NaN NaN NaN 22.097 0.26325 22.097 22.021 22.285 0 0 0 0 0.016683 1 8182 56.432 51.084 1 NaN NaN 0 4549000 4549000 0 21254 365 8048 8232 33329 33329 LIADVAPSAIR 11 0 1 Unmodified _LIADVAPSAIR_ 0 0 0 Q6FHX6;P39748;F5H1Y3 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.3394 2 563.334956 1124.65536 NaN NaN NaN -0.41931 -0.00023621 NaN NaN NaN NaN 77.521 0.66618 77.521 77.22 77.886 0 0 0 0 0.0070774 1 45672 62.823 22.756 1 NaN NaN 0 19334000 0 19334000 21255 1555 8049 8233 33330 33330 LIADVAPSAIR 11 0 1 Unmodified _LIADVAPSAIR_ 0 0 0 Q6FHX6;P39748;F5H1Y3 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.3394 2 563.334956 1124.65536 81958.18 0.17277 9.733E-05 -0.013353 -7.5221E-06 0.15942 8.9808E-05 563.334932607091 568.339021959395 76.442 0.56584 76.442 76.195 76.76 0 186 41 6 0 0 0 0.0023522 1 46039 61.78 25.223 1 1.5316 1.6772 0 32308000 11701000 20607000 21256 1555 8049 8233 33331 33331 LIADVAPSAIR 11 0 1 Unmodified _LIADVAPSAIR_ 0 0 0 Q6FHX6;P39748;F5H1Y3 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.3393 2 563.334956 1124.65536 81758.59 0.76734 0.00043227 0.22704 0.0001279 0.99437 0.00056016 563.335626450146 568.338732821636 88.391 0.70442 88.391 88.094 88.799 0 161 42 6 0 0 0 0.02141 1 48757 43.282 12.208 1 0.65969 0.55105 0 3284100 1804500 1479600 21257 1555 8049 8233 33332 33332 LIADVAPSAIR 11 0 1 Unmodified _LIADVAPSAIR_ 0 0 0 Q6FHX6;P39748;F5H1Y3 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.3361 2 563.334956 1124.65536 81613.33 0.44951 0.00025322 0.34396 0.00019376 0.79347 0.00044699 563.335489204113 568.33901040312 88.375 0.64487 88.375 88.103 88.748 -7.6294E-06 138 35 6 0 0 0 0.019415 2 47888 53.327 22.253 1 0.62408 0.55129 0 2439700 1424300 1015400 21258 1555 8049 8233 33333;33334 33334 LIAGNKPVSFLTAQQLQQLQQQGQATQVR 29 1 1 Unmodified _LIAGNKPVSFLTAQQLQQLQQQGQATQVR_ 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1065.9205 3 1065.25286 3192.73674 NaN NaN NaN -0.45015 -0.00047952 NaN NaN NaN NaN 104.11 0.37366 104.11 103.95 104.32 0 0 0 0 0.0021641 1 65879 36.483 34.118 1 NaN NaN 0 4215200 4215200 0 21259 135 8050 8234 33335 33335 LIAGNKPVSFLTAQQLQQLQQQGQATQVR 29 1 1 Unmodified _LIAGNKPVSFLTAQQLQQLQQQGQATQVR_ 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1071.5938 3 1065.25286 3192.73674 58942.77 0.48558 0.00051727 -0.1379 -0.0001469 0.34768 0.00037037 1065.58627667504 1071.59460713275 115.95 0.36099 115.95 115.78 116.14 7.6294E-06 71 14 8 0 0 0 0.00015916 3 68083 34.558 34.558 1 1.7914 1.5368 0 10920000 3767000 7153200 21260 135 8050 8234 33336;33337;33338 33338 LIAGNKPVSFLTAQQLQQLQQQGQATQVR 29 1 1 Unmodified _LIAGNKPVSFLTAQQLQQLQQQGQATQVR_ 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1071.5956 3 1065.25286 3192.73674 59456.96 0.30673 0.00032675 0.15183 0.00016174 0.45856 0.00048849 1065.58713124806 1071.59513257994 115.8 0.3242 115.8 115.64 115.96 0 79 15 7 0 0 0 8.8431E-07 2 66957 41.65 41.65 1 1.5907 1.3457 0 10976000 4100100 6875900 21261 135 8050 8234 33339;33340 33339 LIAHAGSLLNLAK 13 1 0 Unmodified _LIAHAGSLLNLAK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.9378 3 440.938117 1319.79252 90014.21 0.21784 9.6054E-05 0.18005 7.9391E-05 0.39789 0.00017544 440.938198529474 443.609520382622 82.909 1.3426 82.909 82.423 83.765 0 713 112 8 0 0 0 4.2356E-05 4 49838 81.494 81.494 1 0.78658 0.92446 0 311770000 173340000 138430000 21262 2129 8051 8235 33341;33342;33343;33344 33343 LIAHAGSLLNLAK 13 1 0 Unmodified _LIAHAGSLLNLAK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.9108 2 660.903537 1319.79252 75405.91 0.85258 0.00056347 0.37636 0.00024874 1.2289 0.00081221 660.903649883982 664.910873456379 82.909 0.84557 82.909 82.589 83.435 0 310 71 6 0 0 0 0.00015862 2 49546 96.009 96.009 1 0.79587 0.86045 0 36426000 19392000 17034000 21263 2129 8051 8235 33345;33346 33346 LIAHAGSLLNLAK 13 1 0 Unmodified _LIAHAGSLLNLAK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.9382 3 440.938117 1319.79252 89827.49 0.17305 7.6302E-05 -0.033389 -1.4722E-05 0.13966 6.158E-05 440.938069229568 443.609453738205 80.677 1.4031 80.677 80.174 81.577 0 680 116 8 0 0 0 3.114E-09 4 49457 98.407 98.407 1 0.82528 0.97058 0 370180000 199020000 171150000 21264 2129 8051 8235 33347;33348;33349;33350 33349 LIAHAGSLLNLAK 13 1 0 Unmodified _LIAHAGSLLNLAK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.9037 2 660.903537 1319.79252 75814.08 0.64619 0.00042707 -0.2028 -0.00013403 0.44339 0.00029304 660.903427851173 664.910303216062 80.689 0.94368 80.689 80.354 81.297 0 337 78 6 0 0 0 0.028284 1 49115 33.961 33.961 1 0.77641 0.87084 0 54998000 29248000 25750000 21265 2129 8051 8235 33351 33351 LIAHAGSLLNLAK 13 1 0 Unmodified _LIAHAGSLLNLAK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 443.944 3 440.938117 1319.79252 88029 0.018781 8.2813E-06 0.071604 3.1573E-05 0.090385 3.9854E-05 440.938197489435 443.609472854271 93.493 1.727 93.493 93.202 94.929 0 655 113 10 0 0 0 0.013521 3 52071 30.567 30.567 1 0.97264 0.83448 0 80046000 40931000 39116000 21266 2129 8051 8235 33352;33353;33354 33352 LIAHAGSLLNLAK 13 1 0 Unmodified _LIAHAGSLLNLAK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.9037 2 660.903537 1319.79252 75151.31 0.65675 0.00043405 0.30463 0.00020133 0.96138 0.00063538 660.903670341612 664.910795170095 93.492 1.1044 93.492 93.238 94.343 0 338 72 8 0 0 0 0.00028037 2 52143 66.595 66.595 1 0.97137 0.7718 0 19174000 9716400 9457900 21267 2129 8051 8235 33355;33356 33356 LIAHAGSLLNLAK 13 1 0 Unmodified _LIAHAGSLLNLAK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.61 3 440.938117 1319.79252 90017.71 -0.043927 -1.9369E-05 -0.090936 -4.0097E-05 -0.13486 -5.9466E-05 440.938097506618 443.609393679528 93.032 2.0703 93.032 92.718 94.789 0 542 134 10 0 0 0 7.0871E-05 3 50969 69.03 69.03 1 0.98168 0.83217 0 64312000 31522000 32790000 21268 2129 8051 8235 33357;33358;33359 33358 LIAHAGSLTNLAK 13 1 0 Unmodified _LIAHAGSLTNLAK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.9255 3 436.925988 1307.75613 90546.34 0.080785 3.5297E-05 -0.19216 -8.3961E-05 -0.11138 -4.8663E-05 436.925923605642 439.597243992173 56.94 1.4513 56.94 56.582 58.034 -3.8147E-06 618 118 9 0 0 0 4.0869E-10 2 32001 96.756 96.756 1 0.77153 0.88558 0 197920000 107710000 90207000 21269 785 8052 8236 33360;33361 33361 LIAHAGSLTNLAK 13 1 0 Unmodified _LIAHAGSLTNLAK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.8859 2 654.885344 1307.75613 75079.06 0.81548 0.00053404 -0.49659 -0.00032521 0.31889 0.00020884 654.885185291858 659.39292118947 56.933 0.98542 56.933 56.511 57.496 0 310 64 7 0 0 0 0.00015608 1 31994 85.958 65.655 1 0.96071 1.0398 0 43361000 19658000 23703000 21270 785 8052 8236 33362 33362 LIAHAGSLTNLAK 13 1 0 Unmodified _LIAHAGSLTNLAK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8868 2 654.885344 1307.75613 77708.7 1.0872 0.00071198 -0.26791 -0.00017545 0.81928 0.00053653 654.885208664087 658.89196691003 54.566 0.2201 54.566 54.464 54.684 0 63 18 5 0 0 0 0.0066927 1 31183 45.908 45.908 1 0.9603 1.0045 0 10345000 4590500 5754400 21271 785 8052 8236 33363 33363 LIAHAGSLTNLAK 13 1 0 Unmodified _LIAHAGSLTNLAK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 439.5972 3 436.925988 1307.75613 91617.34 0.53967 0.0002358 -0.18192 -7.9484E-05 0.35775 0.00015631 436.925927959046 439.59727974803 54.568 0.26757 54.568 54.417 54.684 0 108 21 7 0 0 0 5.8763E-05 1 31244 56.569 56.569 1 0.82689 0.92381 0 89500000 46498000 43002000 21272 785 8052 8236 33364 33364 LIAHAGSLTNLAK 13 1 0 Unmodified _LIAHAGSLTNLAK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.3948 2 654.885344 1307.75613 76581.95 0.60164 0.000394 0.019597 1.2834E-05 0.62123 0.00040684 654.885417442602 658.892530872466 54.965 0.76743 54.965 54.636 55.403 0 261 60 6 0 0 0 0.00026972 1 31292 67.113 67.113 1 0.82666 0.88163 0 23186000 12751000 10436000 21273 785 8052 8236 33365 33365 LIAHAGSLTNLAK 13 1 0 Unmodified _LIAHAGSLTNLAK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.9256 3 436.925988 1307.75613 91767.8 0.068744 3.0036E-05 0.030852 1.348E-05 0.099596 4.3516E-05 436.925947940826 439.597388680893 54.97 1.6402 54.97 54.612 56.252 0 568 130 9 0 0 0 7.9133E-05 1 31452 54.524 54.524 1 0.77226 0.88273 0 158130000 90437000 67695000 21274 785 8052 8236 33366 33366 LIAHAGSLTNLAK 13 1 0 Unmodified _LIAHAGSLTNLAK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 439.5976 3 436.925988 1307.75613 89994.34 0.057898 2.5297E-05 -0.18439 -8.0564E-05 -0.12649 -5.5266E-05 436.925943485383 439.597256245824 65.917 2.1485 65.917 65.459 67.608 0 690 145 10 0 0 0 0.057665 1 33940 14.039 14.039 1 0.98302 0.82888 0 55973000 28884000 27089000 21275 785 8052 8236 33367 33367 LIAHAGSLTNLAK 13 1 0 Unmodified _LIAHAGSLTNLAK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 654.8854 2 654.885344 1307.75613 75319.3 0.8755 0.00057335 -0.29199 -0.00019122 0.58351 0.00038213 654.885137508055 658.892197683186 65.916 0.92186 65.916 65.559 66.481 0 331 59 8 0 0 0 0.0022939 1 34024 54.343 49.002 1 1.0088 0.78147 0 13277000 7108600 6168700 21276 785 8052 8236 33368 33368 LIAHAGSLTNLAK 13 1 0 Unmodified _LIAHAGSLTNLAK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 439.5975 3 436.925988 1307.75613 89707.16 -0.15929 -6.9599E-05 0.11909 5.2035E-05 -0.0402 -1.7564E-05 436.926024574184 439.597369543844 65.974 2.1818 65.974 65.467 67.649 0 772 147 10 0 0 0 0.061569 1 33239 16.433 16.433 1 0.93205 0.77607 0 39783000 21108000 18675000 21277 785 8052 8236 33369 33369 LIAHAGSLTNLAK 13 1 0 Unmodified _LIAHAGSLTNLAK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.8931 2 654.885344 1307.75613 75241.62 0.47439 0.00031067 -0.0019802 -1.2968E-06 0.47241 0.00030937 654.88520862906 658.892391317612 65.973 1.1253 65.973 65.609 66.734 0 389 82 8 0 0 0 0.0028283 1 33284 52.167 52.167 1 0.95122 0.78238 0 10100000 5306100 4793900 21278 785 8052 8236 33370 33370 LIALGEENATLK 12 1 0 Unmodified _LIALGEENATLK_ 0 0 0 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.3633 2 636.36391 1270.71327 NaN NaN NaN -0.60785 -0.00038681 NaN NaN NaN NaN 78.848 0.29352 78.848 78.663 78.956 7.6294E-06 0 0 0 0.022819 1 46708 50.194 20.721 1 NaN NaN 0 3526000 3526000 0 21279 103 8053 8237 33371 33371 LIALLEVLSQK 11 1 0 Unmodified _LIALLEVLSQK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98;O75369;A0A024R321 P21333;O75369 P21333 FLNA;FLNB Filamin-A;Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.8969 2 613.889564 1225.76457 78034.46 0.88427 0.00054284 -0.16058 -9.8579E-05 0.72369 0.00044427 613.889386499952 617.896399920315 126.45 0.92886 126.45 126.04 126.97 7.6294E-06 266 68 6 0 0 0 7.4243E-05 2 82249 98.249 62.804 1 1.6151 1.6969 0 15312000 6738900 8573600 21280 1504;1402 8054 8238 33372;33373 33372 LIALLEVLSQK 11 1 0 Unmodified _LIALLEVLSQK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98;O75369;A0A024R321 P21333;O75369 P21333 FLNA;FLNB Filamin-A;Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8969 2 613.889564 1225.76457 78167.73 0.75412 0.00046294 -0.012716 -7.8063E-06 0.7414 0.00045514 613.889426792023 617.896512099414 126.02 0.84308 126.02 125.57 126.41 0 202 52 6 0 0 0 4.4881E-08 2 83930 118.26 87.694 1 1.7113 1.7426 0 16972000 6704100 10268000 21281 1504;1402 8054 8238 33374;33375 33374 LIANNTTVER 10 0 1 Unmodified _LIANNTTVER_ 0 0 0 Q6FI97;Q53FS0;O96019;D3DNS0 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.8115 2 565.811845 1129.60914 82781.3 0.72227 0.00040867 -0.026649 -1.5079E-05 0.69562 0.00039359 565.811469738471 570.815955438283 29.524 0.38623 29.524 29.305 29.692 0 142 31 6 0 0 0 1.1807E-05 2 14294 103.87 52.018 1 0.77168 0.88196 0 125670000 72201000 53474000 21282 1434 8055 8239 33376;33377 33377 LIANNTTVER 10 0 1 Unmodified _LIANNTTVER_ 0 0 0 Q6FI97;Q53FS0;O96019;D3DNS0 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.8155 2 565.811845 1129.60914 80999.02 0.70025 0.00039621 0.16128 9.1255E-05 0.86153 0.00048746 565.811778423498 570.816017970889 29.094 0.36383 29.094 29.004 29.368 0 78 24 6 0 0 0 3.6847E-16 2 13934 154.49 86.538 1 0.80202 0.91437 0 137640000 86086000 51558000 21283 1434 8055 8239 33378;33379 33378 LIANNTTVER 10 0 1 Unmodified _LIANNTTVER_ 0 0 0 Q6FI97;Q53FS0;O96019;D3DNS0 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.8163 2 565.811845 1129.60914 85711.66 0.4285 0.00024245 0.85846 0.00048573 1.287 0.00072818 565.811704906293 570.816632833078 33.636 0.79621 33.636 33.473 34.269 0 162 67 4 0 0 0 0.01212 1 14227 51.066 14.671 1 3.3539 2.864 0 4526300 985860 3540500 21284 1434 8055 8239 33380 33380 LIAQNLELNETIK 13 1 0 Unmodified _LIAQNLELNETIK_ 0 0 0 P52732;B2RAM6;Q59GZ5 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.9351 2 749.927406 1497.84026 72437.09 0.76276 0.00057201 0.26335 0.00019749 1.0261 0.0007695 749.927398814432 753.934844897458 90.154 0.44305 90.154 89.901 90.344 7.6294E-06 104 35 5 0 0 0 7.8532E-05 2 54360 94.363 68.244 1 1.9569 1.9181 0 20921000 6679300 14242000 21285 1602 8056 8240 33381;33382 33381 LIAQNLELNETIK 13 1 0 Unmodified _LIAQNLELNETIK_ 0 0 0 P52732;B2RAM6;Q59GZ5 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.9343 2 749.927406 1497.84026 71313.72 0.53409 0.00040053 0.42057 0.0003154 0.95466 0.00071593 750.428617264531 753.934789689385 89.16 0.44701 89.16 88.96 89.407 0 133 36 5 0 0 0 9.3579E-06 2 54943 100.88 75.219 1 2.3952 2.6524 0 46113000 16084000 30030000 21286 1602 8056 8240 33383;33384 33383 LIASVAGSVER 11 0 1 Unmodified _LIASVAGSVER_ 0 0 0 Q13868;A3KFL5;A3KFL2;B4E001;A3KFL1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.3168 2 551.316763 1100.61897 82733.12 0.70007 0.00038596 0.07741 4.2678E-05 0.77749 0.00042864 551.316631679965 556.320943552482 55.835 0.56927 55.835 55.625 56.194 3.8147E-06 139 42 5 0 0 0 0.00093586 2 31357 71.349 28.958 1 0.9126 0.92452 0 28356000 14272000 14084000 21287 1722 8057 8241 33385;33386 33385 LIASVAGSVER 11 0 1 Unmodified _LIASVAGSVER_ 0 0 0 Q13868;A3KFL5;A3KFL2;B4E001;A3KFL1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.3167 2 551.316763 1100.61897 81645.22 0.44586 0.00024581 -0.13272 -7.3172E-05 0.31314 0.00017264 551.316558981408 556.320742728634 54.864 0.57169 54.864 54.57 55.141 3.8147E-06 180 48 5 0 0 0 0.00044305 3 31407 78.098 32.418 1 0.84678 0.88479 0 22537000 14113000 8423600 21288 1722 8057 8241 33387;33388;33389 33389 LIASVAGSVER 11 0 1 Unmodified _LIASVAGSVER_ 0 0 0 Q13868;A3KFL5;A3KFL2;B4E001;A3KFL1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.3169 2 551.316763 1100.61897 82619.62 0.43303 0.00023873 -0.16613 -9.1592E-05 0.26689 0.00014714 551.316559814116 556.320709326266 64.865 0.61482 64.865 64.571 65.186 0 164 45 5 0 0 0 0.0064337 2 33420 54.416 22.482 1 0.94223 0.79956 0 5148500 2494200 2654300 21289 1722 8057 8241 33390;33391 33391 LIASVAGSVER 11 0 1 Unmodified _LIASVAGSVER_ 0 0 0 Q13868;A3KFL5;A3KFL2;B4E001;A3KFL1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.3173 2 551.316763 1100.61897 82351.05 0.34723 0.00019143 0.017827 9.8282E-06 0.36505 0.00020126 551.316821139308 556.320743757086 65.258 0.52118 65.258 65.014 65.535 -7.6294E-06 134 36 5 0 0 0 0.0070376 1 32909 53.327 22.253 1 1.019 0.87745 0 4412300 2166000 2246300 21290 1722 8057 8241 33392 33392 LICCDILDVLDK 12 1 0 Unmodified _LICCDILDVLDK_ 0 0 0 V9HW98;P62258;G9K389;G9K388;B7ZA86;B4DJB0;K7EIT4 V9HW98 V9HW98 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.8841 2 738.87547 1475.73639 73133.05 0.84195 0.0006221 0.30804 0.00022761 1.15 0.0008497 738.876254998356 742.882585859306 120.91 0.40578 120.91 120.73 121.13 -7.6294E-06 103 28 5 0 0 0 0.00014745 1 78017 109.42 109.42 1 1.5379 1.5087 0 8867600 3134300 5733300 21291 1637 8058 8242 33393 33393 LICCDILDVLDK 12 1 0 Unmodified _LICCDILDVLDK_ 0 0 0 V9HW98;P62258;G9K389;G9K388;B7ZA86;B4DJB0;K7EIT4 V9HW98 V9HW98 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.3853 2 738.87547 1475.73639 NaN NaN NaN -0.091447 -6.7568E-05 NaN NaN NaN NaN 120.45 0.38328 120.45 120.26 120.65 0 0 0 0 4.3404E-08 1 79529 105.86 87.552 1 NaN NaN 0 7188800 0 7188800 21292 1637 8058 8242 33394 33394 LIDFLECGK 9 1 0 Unmodified _LIDFLECGK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.7817 2 547.781167 1093.54778 NaN NaN NaN 0.2745 0.00015037 NaN NaN NaN NaN 92.783 0.94086 92.783 92.304 93.245 0 0 0 0 0.039679 1 56066 57.59 54.018 1 NaN NaN 0 9861000 9861000 0 21293 1009 8059 8243 33395 33395 LIDFLECGK 9 1 0 Unmodified _LIDFLECGK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.7889 2 547.781167 1093.54778 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.962 1 92.962 92.462 93.462 7.6294E-06 0 0 0 0.0029619 1 56347 78.334 36.226 1 21294 1009 8059 8243 33396 33396 LIDFLECGK 9 1 0 Unmodified _LIDFLECGK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.7894 2 547.781167 1093.54778 78880.11 0.80453 0.00044071 0.32425 0.00017762 1.1288 0.00061833 547.781587273066 551.788521515553 91.947 0.97367 91.947 91.363 92.336 7.6294E-06 212 84 4 0 0 0 0.0010522 2 56962 90.657 73.881 1 1.2834 1.3169 0 32046000 14088000 17958000 21295 1009 8059 8243 33397;33398 33398 LIDFLESGK 9 1 0 Unmodified _LIDFLESGK_ 0 0 0 Q59F66;Q92841;B4DZQ7 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.2818 2 511.281857 1020.54916 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.448 1 90.448 89.948 90.948 0 0 0 0 0.006942 1 54658 66.621 31.814 1 21296 1801 8060 8244 33399 33399 LIDFLESGK 9 1 0 Unmodified _LIDFLESGK_ 0 0 0 Q59F66;Q92841;B4DZQ7 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.289 2 511.281857 1020.54916 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.546 1 90.546 90.046 91.046 -7.6294E-06 0 0 0 0.0031194 1 54724 75.696 23.678 1 21297 1801 8060 8244 33400 33400 LIDFLESGK 9 1 0 Unmodified _LIDFLESGK_ 0 0 0 Q59F66;Q92841;B4DZQ7 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.2894 2 511.281857 1020.54916 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.432 1 89.432 88.932 89.932 0 0 0 0 0.006942 1 55216 66.621 18.773 1 21298 1801 8060 8244 33401 33401 LIDFLESGK 9 1 0 Unmodified _LIDFLESGK_ 0 0 0 Q59F66;Q92841;B4DZQ7 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.2815 2 511.281857 1020.54916 89057.3 0.43 0.00021985 -0.34309 -0.00017542 0.086913 4.4437E-05 511.281473858609 515.288757620341 102.96 0.64601 102.96 102.64 103.29 0 122 42 4 0 0 0 0.051211 1 58373 37.549 28.335 1 0.78757 0.64431 0 2611700 1460200 1151500 21299 1801 8060 8244 33402 33402 LIDFLESGK 9 1 0 Unmodified _LIDFLESGK_ 0 0 0 Q59F66;Q92841;B4DZQ7 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.2888 2 511.281857 1020.54916 90419.71 0.23061 0.00011791 -0.50203 -0.00025668 -0.27142 -0.00013877 511.281376488654 515.288678168413 102.76 0.6519 102.76 102.48 103.13 0 136 41 4 0 0 0 0.037381 1 57430 43.083 33.869 1 0.91513 0.74281 0 2850300 1239500 1610900 21300 1801 8060 8244 33403 33403 LIDHLENTK 9 1 0 Unmodified _LIDHLENTK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 361.533 3 361.532868 1081.57677 99335.3 0.043342 1.5669E-05 -0.0995 -3.5973E-05 -0.056159 -2.0303E-05 361.532815111394 364.204142943827 27.373 0.59353 27.373 27.185 27.779 0 141 36 6 0 0 0 0.012777 1 12639 60.019 45.345 1 1.0287 1.1187 0 47938000 19239000 28699000 21301 313 8061 8245 33404 33404 LIDHLENTK 9 1 0 Unmodified _LIDHLENTK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 361.5327 3 361.532868 1081.57677 99213.27 0.49139 0.00017765 -0.2652 -9.5879E-05 0.22619 8.1774E-05 361.532702074646 364.204088256352 26.771 0.51044 26.771 26.524 27.034 1.9073E-06 103 24 7 0 0 0 0.0023948 2 12086 61.161 50.875 1 0.98899 1.1063 0 85425000 43461000 41965000 21302 313 8061 8245 33405;33406 33406 LIDHLENTK 9 1 0 Unmodified _LIDHLENTK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.7958 2 541.795663 1081.57677 81780.18 0.81312 0.00044055 -0.18099 -9.8062E-05 0.63213 0.00034248 541.795503793436 545.802445880566 26.759 0.39107 26.759 26.555 26.946 0 78 16 7 0 0 0 6.8229E-06 1 12111 130.66 112.32 1 1.0297 1.1605 0 60369000 31800000 28569000 21303 313 8061 8245 33407 33407 LIDIFYPGDQQSVTFGTK 18 1 0 Unmodified _LIDIFYPGDQQSVTFGTK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1015.0162 2 1015.01748 2028.02041 58022.08 0.91448 0.00092821 -1.1623 -0.0011798 -0.24784 -0.00025157 1015.51874520648 1019.02116191496 118.98 0.87653 118.98 118.57 119.44 0 219 51 9 0 0 0 3.1615E-05 2 76395 65.295 65.295 1 2.3425 2.5812 0 55636000 16587000 39049000 21304 1611 8062 8246 33408;33409 33409 LIDIFYPGDQQSVTFGTK 18 1 0 Unmodified _LIDIFYPGDQQSVTFGTK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1015.5179 2 1015.01748 2028.02041 NaN NaN NaN 0.32037 0.00032518 NaN NaN NaN NaN 118.49 0.3697 118.49 118.33 118.7 -7.6294E-06 0 0 0 1.8715E-09 1 77897 88.552 65.176 1 NaN NaN 0 13615000 13615000 0 21305 1611 8062 8246 33410 33410 LIDIGNSCR 9 0 1 Unmodified _LIDIGNSCR_ 0 0 0 B0AZS5;O00139;B4DM85;H0Y8H2 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.2697 2 524.266216 1046.51788 84256.17 0.58695 0.00030772 0.41434 0.00021722 1.0013 0.00052494 524.767960354773 529.270562094086 46.355 0.61817 46.355 46.033 46.651 3.8147E-06 136 46 5 0 0 0 0.013268 1 25527 56.729 32.575 1 0.51675 0.56604 0 31131000 25174000 5957400 21306 804 8063 8247 33411 33411 LIDLCQPTQK 10 1 0 Unmodified _LIDLCQPTQK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.3309 2 608.323731 1214.63291 78594.16 0.14908 9.0686E-05 0.34273 0.00020849 0.4918 0.00029917 608.323974762085 612.330614286448 58.46 0.50271 58.46 58.172 58.675 -3.8147E-06 119 40 5 0 0 0 0.012875 1 33190 50.04 30.254 1 0.60044 0.60793 0 6748900 4350500 2398400 21307 1739 8064 8248 33412 33412 LIDLCQPTQK 10 1 0 Unmodified _LIDLCQPTQK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.3302 2 608.323731 1214.63291 78231.11 0.50218 0.00030549 0.18694 0.00011372 0.68912 0.00041921 608.323930635925 612.330768790062 57.499 0.45433 57.499 57.277 57.731 0 110 37 4 0 0 0 0.0022483 3 33268 69.954 41.555 1 0.85215 0.85797 0 7165100 3157400 4007700 21308 1739 8064 8248 33413;33414;33415 33414 LIDLHSPSEIVK 12 1 0 Unmodified _LIDLHSPSEIVK_ 0 0 0 P60866;G3XAN0 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.926 3 450.925765 1349.75547 89552.95 0.19834 8.9435E-05 -0.46808 -0.00021107 -0.26974 -0.00012163 450.925560489903 453.596897327611 76.548 1.2329 76.548 76.203 77.436 0 602 105 10 0 0 0 0.025714 2 44972 27.137 27.137 1 1.1923 1.4092 0 394760000 176880000 217880000 21309 1625 8065 8249 33416;33417 33416 LIDLHSPSEIVK 12 1 0 Unmodified _LIDLHSPSEIVK_ 0 0 0 P60866;G3XAN0 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.885 2 675.88501 1349.75547 75326.1 0.69085 0.00046694 -0.28518 -0.00019275 0.40568 0.00027419 675.884719841671 679.892027828209 76.548 0.83095 76.548 76.298 77.129 0 299 70 7 0 0 0 0.00020103 2 45086 88.056 88.056 1 1.3483 1.4717 0 50485000 21137000 29348000 21310 1625 8065 8249 33418;33419 33419 LIDLHSPSEIVK 12 1 0 Unmodified _LIDLHSPSEIVK_ 0 0 0 P60866;G3XAN0 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.9254 3 450.925765 1349.75547 89809.32 0.046846 2.1124E-05 -0.24478 -0.00011038 -0.19794 -8.9256E-05 450.925672488475 453.597002281291 75.318 1.0725 75.318 74.954 76.027 0 587 96 10 0 0 0 0.0035405 2 45211 45.661 45.661 1 1.2452 1.4633 0 357690000 149350000 208340000 21311 1625 8065 8249 33420;33421 33421 LIDLHSPSEIVK 12 1 0 Unmodified _LIDLHSPSEIVK_ 0 0 0 P60866;G3XAN0 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 450.9257 3 450.925765 1349.75547 89752.71 0.066095 2.9804E-05 0.12744 5.7468E-05 0.19354 8.7271E-05 450.925792808205 453.597127122517 87.105 0.7674 87.105 86.864 87.632 0 230 43 8 0 0 0 0.0074925 1 47811 36.847 36.847 1 1.2729 0.98841 0 14678000 6038400 8639900 21312 1625 8065 8249 33422 33422 LIEAGEQLGFDYGER 15 0 1 Unmodified _LIEAGEQLGFDYGER_ 0 0 0 A0A1B0GV09;Q9H9B1;Q71M33 A0A1B0GV09 A0A1B0GV09 EHMT1;FP13812 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.9154 2 848.912484 1695.81041 67288.5 1.1852 0.0010062 0.54582 0.00046336 1.7311 0.0014695 849.414047239006 853.917779131174 93.268 0.41586 93.268 93.016 93.432 0 77 33 4 0 0 0 3.9051E-10 3 56505 115.14 115.14 1 0.57255 0.59325 0 13734000 7117400 6616200 21313 631 8066 8250 33423;33424;33425 33424 LIEAGEQLGFDYGER 15 0 1 Unmodified _LIEAGEQLGFDYGER_ 0 0 0 A0A1B0GV09;Q9H9B1;Q71M33 A0A1B0GV09 A0A1B0GV09 EHMT1;FP13812 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.9127 2 848.912484 1695.81041 66792.66 0.79952 0.00067873 -0.014407 -1.223E-05 0.78512 0.0006665 848.912810280315 853.916741521863 92.562 0.42382 92.562 92.347 92.771 0 86 34 5 0 0 0 2.2747E-10 1 57346 119.39 119.39 1 0.79031 0.83507 0 23522000 6978300 16544000 21314 631 8066 8250 33426 33426 LIEAGEQLGFDYGER 15 0 1 Unmodified _LIEAGEQLGFDYGER_ 0 0 0 A0A1B0GV09;Q9H9B1;Q71M33 A0A1B0GV09 A0A1B0GV09 EHMT1;FP13812 Histone-lysine N-methyltransferase EHMT1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 854.4189 2 848.912484 1695.81041 NaN NaN NaN -0.35518 -0.00030151 NaN NaN NaN NaN 106.27 0.50002 106.27 106.04 106.54 7.6294E-06 0 0 0 0.0040483 1 60843 58.674 43.995 1 NaN NaN 0 1450900 0 1450900 21315 631 8066 8250 33427 33427 LIEAGEQLGFDYGER 15 0 1 Unmodified _LIEAGEQLGFDYGER_ 0 0 0 A0A1B0GV09;Q9H9B1;Q71M33 A0A1B0GV09 A0A1B0GV09 EHMT1;FP13812 Histone-lysine N-methyltransferase EHMT1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.4205 2 848.912484 1695.81041 NaN NaN NaN 0.14401 0.00012225 NaN NaN NaN NaN 106.18 0.40917 106.18 105.96 106.37 0 0 0 0 0.0003568 1 59775 74.46 62.247 1 NaN NaN 0 1642500 0 1642500 21316 631 8066 8250 33428 33428 LIEDEFIIDESDQSFASR 18 0 1 Unmodified _LIEDEFIIDESDQSFASR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1057.496 2 1057.49985 2112.98514 61688.03 0.84774 0.00089649 -0.89125 -0.0009425 -0.043505 -4.6007E-05 1057.99933471607 1063.00527846416 111.85 0.35868 111.85 111.66 112.01 0 62 26 4 0 0 0 3.2614E-05 2 70533 64.65 64.65 1 0.85353 0.8733 0 6644900 2665100 3979800 21317 1681 8067 8251 33429;33430 33430 LIEDEFIIDESDQSFASR 18 0 1 Unmodified _LIEDEFIIDESDQSFASR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1057.9978 2 1057.49985 2112.98514 NaN NaN NaN -1.6244 -0.0017178 NaN NaN NaN NaN 111.36 0.21026 111.36 111.28 111.49 0 0 0 0 0.00032975 1 71865 62.14 53.835 1 NaN NaN 0 3668600 3668600 0 21318 1681 8067 8251 33431 33431 LIEDEFIIDESDQSFASR 18 0 1 Unmodified _LIEDEFIIDESDQSFASR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1062.5034 2 1057.49985 2112.98514 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.32 1 111.32 110.82 111.82 7.6294E-06 0 0 0 0.004199 1 71811 51.218 29.345 1 21319 1681 8067 8251 33432 33432 LIEDEFIIDESDQSFASR 18 0 1 Unmodified _LIEDEFIIDESDQSFASR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1058.5035 2 1057.49985 2112.98514 59043.12 0.49308 0.00052143 0.045807 4.8441E-05 0.53889 0.00056987 1058.00106107616 1063.00571845017 122.73 0.54519 122.73 122.52 123.06 7.6294E-06 103 26 6 0 0 0 0.0054715 2 73197 33.195 33.195 1 1.3241 1.1306 0 5715500 2045200 3670300 21320 1681 8067 8251 33433;33434 33434 LIEDNEYTAR 10 0 1 Unmodified _LIEDNEYTAR_ 0 0 0 Q9H7V3;B3KPS6;B2RA70;J3QRU1;P12931;P06241;P07947;Q9P134;B3KUV3;A0A0S2Z3Y4;A0A0S2Z3Y8;Q573B4;B4DZS7;A0A0S2Z3T3;P06239 Q9H7V3 Q9H7V3 YES1;SRC;FYN;LCK Non-specific protein-tyrosine kinase;Proto-oncogene tyrosine-protein kinase Src;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Yes;Tyrosine-protein kinase Lck ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3043 2 612.298767 1222.58298 NaN NaN NaN 0.84733 0.00051882 NaN NaN NaN NaN 38.013 0.51746 38.013 37.776 38.293 0 0 0 0 0.032522 1 19356 51.346 39.498 1 NaN NaN 0 8417400 0 8417400 21321 870 8068 8252 33435 33435 LIEDNEYTAR 10 0 1 Unmodified _LIEDNEYTAR_ 0 0 0 Q9H7V3;B3KPS6;B2RA70;J3QRU1;P12931;P06241;P07947;Q9P134;B3KUV3;A0A0S2Z3Y4;A0A0S2Z3Y8;Q573B4;B4DZS7;A0A0S2Z3T3;P06239 Q9H7V3 Q9H7V3 YES1;SRC;FYN;LCK Non-specific protein-tyrosine kinase;Proto-oncogene tyrosine-protein kinase Src;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Yes;Tyrosine-protein kinase Lck ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.3034 2 612.298767 1222.58298 NaN NaN NaN 0.78928 0.00048328 NaN NaN NaN NaN 37.103 0.37875 37.103 36.962 37.341 3.8147E-06 0 0 0 0.0040971 1 19148 73.985 63.754 1 NaN NaN 0 9179300 0 9179300 21322 870 8068 8252 33436 33436 LIEIENFK 8 1 0 Unmodified _LIEIENFK_ 0 0 0 Q14683;A8K7A6;Q6P2R1;B7Z709;Q68EN4;Q7Z4C6;V9GYN9 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.2916 2 503.2844 1004.55425 NaN NaN NaN -0.26573 -0.00013374 NaN NaN NaN NaN 98.938 0.4713 98.938 98.8 99.271 0 0 0 0 0.041784 1 55047 53.166 0 1 NaN NaN 0 2103000 0 2103000 21323 1739 8069 8253 33437 33437 LIEQEEYLNVQVK 13 1 0 Unmodified _LIEQEEYLNVQVK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.938 2 802.930145 1603.84574 68927.05 0.88185 0.00070806 0.083646 6.7162E-05 0.96549 0.00077522 802.930039977408 806.937310772748 84.904 1.2456 84.904 84.556 85.801 0 699 101 10 0 0 0 3.324E-89 6 52538 234.92 234.92 1 0.84567 0.98391 0 239470000 129940000 109520000 21324 2070 8070 8254 33438;33439;33440;33441;33442;33443 33441 LIEQEEYLNVQVK 13 1 0 Unmodified _LIEQEEYLNVQVK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 802.9312 2 802.930145 1603.84574 67929.08 0.62679 0.00050327 0.16971 0.00013626 0.79649 0.00063953 802.930231761497 806.937314156814 98.46 1.5888 98.46 98.107 99.696 0 611 93 10 0 0 0 8.1089E-09 3 55459 117.02 117.02 1 1.8637 1.5959 0 73667000 24998000 48669000 21325 2070 8070 8254 33444;33445;33446 33445 LIEQEEYLNVQVK 13 1 0 Unmodified _LIEQEEYLNVQVK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.4321 2 802.930145 1603.84574 68169.27 0.6503 0.00052215 0.18744 0.0001505 0.83775 0.00067265 802.930278772328 806.937326993265 98.391 1.5205 98.391 97.977 99.497 0 534 92 10 0 0 0 9.961E-05 3 54567 92.611 92.611 1 1.8321 1.5564 0 73629000 25484000 48145000 21326 2070 8070 8254 33447;33448;33449 33448 LIETTANMNSSYVK 14 1 0 Oxidation (M) _LIETTANM(ox)NSSYVK_ LIETTANM(1)NSSYVK LIETTANM(96.23)NSSYVK 0 1 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.9005 2 793.890163 1585.76577 69308.77 1.1612 0.0009219 -0.015067 -1.1961E-05 1.1462 0.00090994 793.889621462541 797.897311454079 44.413 0.38681 44.413 44.269 44.656 0 137 32 6 0 0 0 1.4235E-05 1 23797 96.229 63.909 1 1.2559 1.2944 0 12847000 6014200 6833000 21327 672 8071 8255 33450 33450 523 LIETTANMNSSYVK 14 1 0 Oxidation (M) _LIETTANM(ox)NSSYVK_ LIETTANM(1)NSSYVK LIETTANM(101.93)NSSYVK 0 1 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.8909 2 793.890163 1585.76577 68317.45 0.922 0.00073197 0.00839 6.6607E-06 0.93039 0.00073863 794.392945447036 797.897055208592 43.625 0.445 43.625 43.383 43.828 0 140 33 7 0 0 0 1.7644E-06 2 23675 101.93 72.456 1 1.4049 1.5069 0 22913000 8958700 13955000 21328 672 8071 8255 33451;33452 33452 523 LIETTANMNSSYVK 14 1 0 Unmodified _LIETTANMNSSYVK_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.9033 2 785.892706 1569.77086 NaN NaN NaN 0.0098301 7.7254E-06 NaN NaN NaN NaN 73.217 0.37636 73.217 73.046 73.423 0 0 0 0 0.041734 1 37895 39.917 21.605 1 NaN NaN 0 577750 0 577750 21329 672 8071 8256 33453 33453 LIEVDDER 8 0 1 Unmodified _LIEVDDER_ 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.7513 2 494.750921 987.48729 86089.16 0.38677 0.00019135 0.0080943 4.0046E-06 0.39486 0.00019536 494.750986095464 499.754948769646 39.239 1.5281 39.239 38.78 40.308 0 548 125 11 0 0 0 0.0073633 5 20086 83.265 60.773 1 0.69102 0.8201 0 741970000 421160000 320810000 21330 649 8072 8257 33454;33455;33456;33457;33458 33454 LIEVDDER 8 0 1 Unmodified _LIEVDDER_ 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.7551 2 494.750921 987.48729 84599.97 0.1206 5.9667E-05 0.109 5.393E-05 0.22961 0.0001136 494.751029783988 499.75502647734 38.322 1.2037 38.322 37.946 39.149 0 480 100 9 0 0 0 0.0036078 3 19960 96.253 66.068 1 0.76547 0.90532 0 1528800000 879470000 649310000 21331 649 8072 8257 33459;33460;33461 33460 LIEVDDER 8 0 1 Unmodified _LIEVDDER_ 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.7551 2 494.750921 987.48729 84337.36 0.27272 0.00013493 -0.10319 -5.1054E-05 0.16952 8.3872E-05 494.751074039686 499.75493563137 44.478 1.9379 44.478 44.028 45.966 -3.8147E-06 715 141 11 0 0 0 0.0073633 4 21498 83.265 66.489 1 1.4648 1.2694 0 163100000 68342000 94759000 21332 649 8072 8257 33462;33463;33464;33465 33465 LIEVDDER 8 0 1 Unmodified _LIEVDDER_ 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 499.755 2 494.750921 987.48729 85894.9 0.32672 0.00016164 -0.2541 -0.00012572 0.072613 3.5925E-05 494.750873766647 499.754870453761 44.59 1.9055 44.59 44.135 46.04 -3.8147E-06 769 130 10 0 0 0 0.0073633 3 20519 83.265 68.489 1 1.5096 1.3179 0 112150000 45117000 67030000 21333 649 8072 8257 33466;33467;33468 33467 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.798 2 558.798403 1115.58225 79806.46 0.88924 0.0004969 -0.1709 -9.5497E-05 0.71834 0.00040141 558.798721119482 567.809287220102 26.053 0.94454 26.053 25.807 26.751 0 347 54 10 0 0 0 8.7743E-08 2 11517 170.05 88.926 1 0.75502 0.92829 0 2591300000 1319500000 1271700000 21334 649 8073 8258 33469;33470 33470 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 372.8673 3 372.868027 1115.58225 NaN NaN NaN -0.40349 -0.00015045 NaN NaN NaN NaN 27.737 0.3898 27.737 27.553 27.943 0 0 0 0 0.04778 1 12883 24.853 18.621 1 NaN NaN 0 6670500 6670500 0 21335 649 8073 8258 33471 33471 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.8102 2 558.798403 1115.58225 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.315 1 27.315 26.815 27.815 0 0 0 0 0.018021 1 12554 67.993 35.152 1 21336 649 8073 8258 33472 33472 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.2982 2 558.798403 1115.58225 80507.26 0.63658 0.00035572 -0.32543 -0.00018185 0.31115 0.00017387 558.798107633932 567.809510780259 26.809 0.79753 26.809 26.62 27.418 1.9073E-06 115 45 6 0 0 0 0.034115 1 12038 67.897 46.449 1 0.70626 0.81638 0 28591000 14537000 14054000 21337 649 8073 8258 33473 33473 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.2164 3 372.868027 1115.58225 97831.27 0.27117 0.00010111 -1.4002 -0.0005221 -1.1291 -0.00042099 373.201448825526 378.87540443201 27.308 1.1306 27.308 27.065 28.196 0 164 71 6 0 0 0 0.04477 1 12853 26.673 19.293 1 0.15316 0.18276 0 51032000 41696000 9336000 21338 649 8073 8258 33474 33474 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 372.8684 3 372.868027 1115.58225 94624.61 0.20853 7.7754E-05 -0.68495 -0.0002554 -0.47642 -0.00017764 372.868179068053 378.875315917882 25.657 1.3427 25.657 25.304 26.647 -1.9073E-06 515 75 13 0 0 0 0.00015609 2 11173 96.668 51.688 1 0.82593 0.99702 0 4589100000 2464000000 2125100000 21339 649 8073 8258 33475;33476 33475 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.8093 2 558.798403 1115.58225 79763.54 0.65541 0.00036624 -0.18532 -0.00010356 0.47008 0.00026268 558.799168145214 567.808877611213 25.641 0.85053 25.641 25.417 26.267 0 312 47 8 0 0 0 2.6427E-11 2 11213 172.25 86.154 1 0.79102 0.95234 0 2999500000 1551800000 1447800000 21340 649 8073 8258 33477;33478 33478 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.8099 2 558.798403 1115.58225 80311.05 0.55291 0.00030896 1.9283 0.0010775 2.4812 0.0013865 558.798015617409 567.80973371759 26.423 0.3758 26.423 26.252 26.627 0 134 22 8 0 0 0 0.0029322 1 11816 90.657 67.228 1 0.87298 1.0246 0 59210000 27684000 31526000 21341 649 8073 8258 33479 33479 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 372.8678 3 372.868027 1115.58225 97338.33 0.41104 0.00015326 -0.54883 -0.00020464 -0.1378 -5.138E-05 372.867713724646 378.87527240353 26.774 0.79402 26.774 26.607 27.401 1.9073E-06 130 38 6 0 0 0 0.017425 1 12482 34.692 34.692 1 0.69673 0.80851 0 36858000 20775000 16084000 21342 649 8073 8258 33480 33480 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 378.8758 3 372.868027 1115.58225 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.397 1 26.397 25.897 26.897 1.9073E-06 0 0 0 0.022594 1 11825 46.462 21.586 1 21343 649 8073 8258 33481 33481 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.7924 2 558.798403 1115.58225 80310.9 0.84716 0.00047339 -0.037363 -2.0879E-05 0.80979 0.00045251 558.798117952036 567.809092991143 26.747 0.59533 26.747 26.572 27.167 0 72 27 6 0 0 0 0.035392 1 12142 77.732 53.577 1 0.63305 0.72741 0 25499000 14067000 11433000 21344 649 8073 8258 33482 33482 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.798 2 558.798403 1115.58225 79884.43 0.40033 0.0002237 -0.32405 -0.00018108 0.076275 4.2622E-05 558.798479322279 567.809336044125 29.002 1.7286 29.002 28.571 30.3 0 808 126 10 0 0 0 0.0068787 4 11565 78.334 69.472 1 1.3601 1.2491 0 297550000 127830000 169720000 21345 649 8073 8258 33483;33484;33485;33486 33484 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 378.8754 3 372.868027 1115.58225 95420.36 0.015466 5.7668E-06 -0.60694 -0.00022631 -0.59147 -0.00022054 372.868006375776 378.875395510208 28.961 1.7461 28.961 28.485 30.231 -1.9073E-06 828 126 10 0 0 0 0.003788 3 11573 55.064 37.833 1 1.4336 1.3269 0 439980000 179410000 260570000 21346 649 8073 8258 33487;33488;33489 33488 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.7986 2 558.798403 1115.58225 79913.94 0.18533 0.00010356 -0.29007 -0.00016209 -0.10474 -5.8526E-05 558.79859190051 567.809342207514 29.088 1.6155 29.088 28.729 30.345 0 599 100 9 0 0 0 0.0016424 4 11157 104.2 79.06 1 1.4026 1.2063 0 327910000 134950000 192960000 21347 649 8073 8258 33490;33491;33492;33493 33491 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 378.8755 3 372.868027 1115.58225 96513.56 -0.29062 -0.00010836 -0.5414 -0.00020187 -0.83202 -0.00031024 372.86816247568 378.875449108276 29.084 2.7353 29.084 28.786 31.522 0 663 160 11 0 0 0 0.003788 3 11154 55.064 40.945 1 1.3533 1.1659 0 472010000 188090000 283920000 21348 649 8073 8258 33494;33495;33496 33494 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.8105 2 558.798403 1115.58225 81272.5 0.33177 0.00018539 0.080493 4.4979E-05 0.41226 0.00023037 558.798102654302 567.809469076179 30.507 1.4049 30.507 30.266 31.671 1.9073E-06 210 77 5 0 0 0 0.029656 1 12132 47.603 43.187 1 1.3183 1.1245 0 2961500 1299400 1662100 21349 649 8073 8258 33497 33497 LIFSNAK 7 1 0 Unmodified _LIFSNAK_ 0 0 0 Q9NSI6;Q5R2U7;H7C409 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 396.7338 2 396.734346 791.454139 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.588 1 42.588 42.088 43.088 3.8147E-06 0 0 0 0.036991 1 22995 70.716 33.887 1 21350 2068 8074 8259 33498 33498 LIFSNSK 7 1 0 Unmodified _LIFSNSK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 404.7319 2 404.731803 807.449054 94529.55 0.16184 6.5501E-05 0.39784 0.00016102 0.55968 0.00022652 404.731842532255 408.738961962379 41.053 1.0484 41.053 40.485 41.534 0 405 89 7 0 0 0 0.027156 1 21385 73.975 10.668 1 0.75313 0.85542 0 162560000 94527000 68029000 21351 1942 8075 8260 33499 33499 LIFSNSK 7 1 0 Unmodified _LIFSNSK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 404.7314 2 404.731803 807.449054 93995.18 0.36208 0.00014654 0.12656 5.1225E-05 0.48864 0.00019777 404.731723934615 408.73886070012 40.001 0.96808 40.001 39.491 40.46 0 329 81 7 0 0 0 0.010985 2 21061 109.63 29.167 1 0.85421 0.98663 0 194350000 109530000 84817000 21352 1942 8075 8260 33500;33501 33500 LIFSNSK 7 1 0 Unmodified _LIFSNSK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.4576 1 808.45633 807.449054 NaN NaN NaN 0.66799 0.00054004 NaN NaN NaN NaN 39.81 0.2355 39.81 39.635 39.87 0 0 0 0 0.014867 1 21085 110.81 19.181 1 NaN NaN 0 7751500 7751500 0 21353 1942 8075 8260 33502 33502 LIFSNSK 7 1 0 Unmodified _LIFSNSK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 408.7387 2 404.731803 807.449054 93914.35 0.046798 1.8941E-05 0.66594 0.00026953 0.71273 0.00028847 404.731654594952 408.738786697304 45.425 0.77733 45.425 45.116 45.893 -3.8147E-06 227 50 6 0 0 0 0.033843 1 21145 63.301 18.535 1 1.5549 1.2663 0 7374500 2648200 4726400 21354 1942 8075 8260 33503 33503 LIGEYGLR 8 0 1 Unmodified _LIGEYGLR_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.7631 2 460.763635 919.512717 87752.68 0.20888 9.6246E-05 -0.73242 -0.00033747 -0.52353 -0.00024122 460.763098092769 465.767419620878 63.304 2.3307 63.304 62.67 65.001 0 1020 218 8 0 0 0 0.0033502 1 36423 97.068 46.948 1 0.89435 1.0584 0 335310000 168880000 166430000 21355 157 8076 8261 33504 33504 LIGEYGLR 8 0 1 Unmodified _LIGEYGLR_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.7633 2 460.763635 919.512717 87761.96 0.22783 0.00010498 -0.036162 -1.6662E-05 0.19167 8.8315E-05 460.763478648298 465.767707897054 61.885 2.3106 61.885 61.313 63.623 0 990 207 8 0 0 0 0.0033502 2 36195 97.068 57.849 1 0.89573 1.0392 0 324430000 167070000 157350000 21356 157 8076 8261 33505;33506 33505 LIGEYGLR 8 0 1 Unmodified _LIGEYGLR_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.763 2 460.763635 919.512717 88642.25 0.24539 0.00011307 -0.63681 -0.00029342 -0.39142 -0.00018035 460.763136564025 465.767489056124 72.509 2.6094 72.509 72.018 74.627 0 739 187 8 0 0 0 0.0062085 3 38210 88.029 37.909 1 0.84235 0.71637 0 34674000 18584000 16090000 21357 157 8076 8261 33507;33508;33509 33507 LIGEYGLR 8 0 1 Unmodified _LIGEYGLR_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 460.7633 2 460.763635 919.512717 88614.34 0.019271 8.8792E-06 -0.28172 -0.00012981 -0.26245 -0.00012093 460.763323427356 465.767589205858 72.963 2.6043 72.963 72.424 75.029 0 761 187 7 0 0 0 0.0048051 4 37683 92.467 47.856 1 0.84262 0.73502 0 31453000 16476000 14977000 21358 157 8076 8261 33510;33511;33512;33513 33511 LIGISQR 7 0 1 Unmodified _LIGISQR_ 0 0 0 O75794;H7BZW7;X6RF82 O75794 O75794 CDC123 Cell division cycle protein 123 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.7457 2 393.745245 785.475937 95816.3 0.35133 0.00013834 -0.066837 -2.6317E-05 0.2845 0.00011202 393.745449450955 398.749202722648 40.858 0.26513 40.858 40.769 41.035 0 63 18 4 0 0 0 0.026873 2 21939 86.866 36.408 1 3.4009 3.7183 0 30476000 5249300 25226000 21359 1413 8077 8262 33514;33515 33515 LIGLSATLPNYEDVATFLR 19 0 1 Unmodified _LIGLSATLPNYEDVATFLR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1047.5616 2 1047.0675 2092.12046 NaN NaN NaN -0.91316 -0.00095614 NaN NaN NaN NaN 133.42 0.33582 133.42 133.19 133.53 0 0 0 0 1.3515E-66 2 89628 173.72 135.08 1 NaN NaN 0 131660000 131660000 0 21360 1411 8078 8263 33516;33517 33516 LIGLSATLPNYEDVATFLR 19 0 1 Unmodified _LIGLSATLPNYEDVATFLR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1052.5721 2 1047.0675 2092.12046 NaN NaN NaN 0.14342 0.00015017 NaN NaN NaN NaN 133.42 0.23619 133.42 133.34 133.57 0 0 0 0 2.1382E-42 1 89640 155.39 127.18 1 NaN NaN 0 135210000 0 135210000 21361 1411 8078 8263 33518 33518 LIGPLSHSILTEAIK 15 1 0 Unmodified _LIGPLSHSILTEAIK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.6534 3 531.318774 1590.93449 83990.74 0.4987 0.00026497 -0.093503 -4.968E-05 0.4052 0.00021529 531.653051479488 534.324377060411 105.88 0.99412 105.88 105.43 106.43 -7.6294E-06 272 72 5 0 0 0 0.0013351 2 65559 39.517 39.517 1 0.339 0.33221 0 21214000 16048000 5166500 21362 1965 8079 8264 33519;33520 33519 LIGPLSHSILTEAIK 15 1 0 Unmodified _LIGPLSHSILTEAIK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.9905 3 531.318774 1590.93449 82502.23 0.63175 0.00033566 -0.2122 -0.00011275 0.41955 0.00022291 531.318502180016 533.990076815575 104.46 1.0292 104.46 103.96 104.99 0 337 82 7 0 0 0 0.015657 1 66020 23.481 23.481 1 0.32467 0.33706 0 33519000 25476000 8043000 21363 1965 8079 8264 33521 33521 LIGPLSHSILTEAIK 15 1 0 Unmodified _LIGPLSHSILTEAIK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.3187 3 531.318774 1590.93449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.17 1 104.17 103.67 104.67 0 0 0 0 0.002203 1 65962 78.069 49.057 1 21364 1965 8079 8264 33522 33522 LIGPLSHSILTEAIK 15 1 0 Unmodified _LIGPLSHSILTEAIK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 531.3198 3 531.318774 1590.93449 83049.17 0.90114 0.00047879 0.44122 0.00023443 1.3424 0.00071322 531.318893693496 533.990369914748 115.81 0.51502 115.81 115.6 116.12 0 114 21 9 0 0 0 0.046987 1 67841 17.078 17.078 1 0.64162 0.49989 0 15712000 9292000 6419500 21365 1965 8079 8264 33523 33523 LIGPLSHSILTEAIK 15 1 0 Unmodified _LIGPLSHSILTEAIK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.9904 3 531.318774 1590.93449 83363.9 0.6018 0.00031975 0.075674 4.0207E-05 0.67747 0.00035995 531.318772009817 534.324450176998 115.45 0.66067 115.45 115.28 115.94 -7.6294E-06 123 31 8 0 0 0 0.042662 1 66725 17.962 17.962 1 0.5658 0.4651 0 9824300 5940900 3883400 21366 1965 8079 8264 33524 33524 LIGPNCPGVINPGECK 16 1 0 Unmodified _LIGPNCPGVINPGECK_ 0 0 0 Q6IAL5;B2R8A1;A8K4W7;P53597;B7Z438 Q6IAL5 Q6IAL5 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.4349 2 862.926557 1723.83856 66777.14 0.51477 0.00044421 -0.84431 -0.00072858 -0.32954 -0.00028437 863.427907213849 866.933336207634 74.725 0.39188 74.725 74.5 74.892 0 160 34 7 0 0 0 0.00018698 1 43771 60.49 60.49 1 1.685 1.7504 0 16957000 5605200 11352000 21367 743 8080 8265 33525 33525 LIGPNCPGVINPGECK 16 1 0 Unmodified _LIGPNCPGVINPGECK_ 0 0 0 Q6IAL5;B2R8A1;A8K4W7;P53597;B7Z438 Q6IAL5 Q6IAL5 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 866.934 2 862.926557 1723.83856 66267.86 0.45877 0.00039588 -0.53267 -0.00045965 -0.073903 -6.3773E-05 862.926681371535 866.933643295498 85.251 0.57542 85.251 84.987 85.562 0 129 37 6 0 0 0 0.0035069 2 46563 36.847 36.847 1 1.0264 0.8075 0 3115600 1383800 1731800 21368 743 8080 8265 33526;33527 33526 LIGPNCPGVINPGECK 16 1 0 Unmodified _LIGPNCPGVINPGECK_ 0 0 0 Q6IAL5;B2R8A1;A8K4W7;P53597;B7Z438 Q6IAL5 Q6IAL5 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 867.4362 2 862.926557 1723.83856 66693.28 0.48391 0.00041758 -0.4964 -0.00042835 -0.012491 -1.0779E-05 863.42705607882 867.43516090244 85.413 0.47921 85.413 85.115 85.594 -7.6294E-06 138 29 6 0 0 0 0.0078919 1 45924 34.685 34.685 1 0.87705 0.71078 0 2647600 1337900 1309700 21369 743 8080 8265 33528 33528 LIGQIVSSITASLR 14 0 1 Unmodified _LIGQIVSSITASLR_ 0 0 0 Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2;F8VQQ4 Q71U36 Q71U36 TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.439 2 729.437941 1456.86133 72147.76 1.1929 0.00087018 -0.48532 -0.00035401 0.70763 0.00051617 729.437709960549 734.441673522658 125.37 0.27312 125.37 125.18 125.45 0 85 18 6 0 0 0 0.0009718 1 81463 57.019 57.019 1 0.36794 0.3668 0 8671100 5493700 3177400 21370 1869 8081 8266 33529 33529 LIGQIVSSITASLR 14 0 1 Unmodified _LIGQIVSSITASLR_ 0 0 0 Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2;F8VQQ4 Q71U36 Q71U36 TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.4019 2 729.437941 1456.86133 71346.98 1.0121 0.00073828 0.15984 0.00011659 1.172 0.00085487 729.437988141545 734.442021515581 125.49 0.49791 125.49 125.42 125.92 -7.6294E-06 100 32 7 0 0 0 1.8578E-29 1 81548 151.79 151.79 1 0.3576 0.37467 0 12467000 8927400 3539200 21371 1869 8081 8266 33530 33530 LIGQIVSSITASLR 14 0 1 Unmodified _LIGQIVSSITASLR_ 0 0 0 Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2;F8VQQ4 Q71U36 Q71U36 TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.4383 2 729.437941 1456.86133 72120.16 1.1604 0.00084647 -0.15837 -0.00011552 1.0021 0.00073095 729.437728367733 734.44190071375 124.87 0.85963 124.87 124.55 125.41 0 248 60 8 0 0 0 6.5956E-05 2 83050 90.653 90.653 1 0.37098 0.3652 0 14495000 10218000 4277100 21372 1869 8081 8266 33531;33532 33531 LIGVANQK 8 1 0 Unmodified _LIGVANQK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.7586 2 421.758352 841.502152 92023.84 0.22874 9.6473E-05 0.6684 0.0002819 0.89714 0.00037837 421.758487025545 425.765668215968 28.509 0.51479 28.509 28.374 28.889 0 172 49 6 0 0 0 0.00060846 2 13645 129.96 38.377 1 0.9483 1.0601 0 102620000 50928000 51697000 21373 897 8082 8267 33533;33534 33534 LIGVANQK 8 1 0 Unmodified _LIGVANQK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 425.7654 2 421.758352 841.502152 92217.77 -0.50613 -0.00021346 0.32193 0.00013578 -0.1842 -7.7688E-05 421.758300851034 425.765523636067 32.54 0.79634 32.54 32.072 32.869 0 110 39 5 0 0 0 0.012101 2 14006 68.398 23.425 1 1.1959 0.94782 0 10313000 4603000 5709900 21374 897 8082 8267 33535;33536 33535 LIGVANQK 8 1 0 Unmodified _LIGVANQK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 421.7583 2 421.758352 841.502152 90703.7 -0.42941 -0.00018111 0.59431 0.00025066 0.1649 6.9548E-05 421.758471580748 425.765667090157 32.528 0.58489 32.528 32.236 32.821 0 110 28 5 0 0 0 0.0092164 2 13512 75.269 22.866 1 1.1656 0.95042 0 7711700 3668400 4043300 21375 897 8082 8267 33537;33538 33537 LIGVYTDFAFR 11 0 1 Unmodified _LIGVYTDFAFR_ 0 0 0 Q5SY16 Q5SY16 Q5SY16 NOL9 Polynucleotide 5-hydroxyl-kinase NOL9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3486 2 651.348063 1300.68157 76639.59 0.88771 0.00057821 1.2415 0.00080863 2.1292 0.0013868 651.348957389537 656.35350169179 112.35 0.63736 112.35 112.02 112.65 0 136 45 4 0 0 0 0.003328 1 72648 60.019 48.172 1 1.6023 1.6185 0 10022000 4973900 5047800 21376 1818 8083 8268 33539 33539 LIGWGQIR 8 0 1 Unmodified _LIGWGQIR_ 0 0 0 P41091;Q2VIR3 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.7838 2 471.779619 941.544686 88237.91 0.43983 0.0002075 0.25502 0.00012031 0.69485 0.00032782 471.7795543951 476.783834840817 82.395 0.81889 82.395 81.919 82.738 0 260 69 6 0 0 0 0.016651 1 49089 60.961 8.278 1 1.0592 1.0835 0 33501000 16664000 16837000 21377 1559 8084 8269 33540 33540 LIHEPSAALLAYGIGQDSPTGK 22 1 0 Unmodified _LIHEPSAALLAYGIGQDSPTGK_ 0 0 0 Q0VDF9 Q0VDF9 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 749.4022 3 746.730342 2237.1692 71338.55 1.0492 0.00078349 -0.069753 -5.2087E-05 0.97948 0.00073141 747.064786973889 749.401652073636 111.91 0.29961 111.91 111.81 112.11 0 52 19 5 0 0 0 0.044071 1 64950 11.381 11.381 1 0.85934 0.66723 0 3567100 2034900 1532200 21378 1697 8085 8270 33541 33541 LIHEPSAALLAYGIGQDSPTGK 22 1 0 Unmodified _LIHEPSAALLAYGIGQDSPTGK_ 0 0 0 Q0VDF9 Q0VDF9 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 749.735 3 746.730342 2237.1692 71107.27 0.60077 0.00044861 -0.064118 -4.7879E-05 0.53665 0.00040074 747.064738180762 749.735575362036 111.7 0.26279 111.7 111.59 111.85 0 33 16 4 0 0 0 0.042129 1 63857 11.804 11.804 1 1.1738 0.92443 0 3875100 2193200 1681900 21379 1697 8085 8270 33542 33542 LIHTLDDR 8 0 1 Unmodified _LIHTLDDR_ 0 0 0 Q9BXP5;H7C3A1 Q9BXP5 Q9BXP5 SRRT Serrate RNA effector molecule homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 331.5183 3 328.182058 981.524344 105996.1 0.35851 0.00011766 -0.094865 -3.1133E-05 0.26364 8.6522E-05 328.181861472344 331.518046166334 26.961 0.41683 26.961 26.822 27.239 1.9073E-06 64 19 5 0 0 0 0.0097782 1 12324 51.066 30.196 1 1.616 1.6614 0 21246000 7388300 13858000 21380 2013 8086 8271 33543 33543 LIIEEDTENENEK 13 1 0 Unmodified _LIIEEDTENENEK_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.3733 2 788.372857 1574.73116 68502.86 0.77022 0.00060722 0.75956 0.00059881 1.5298 0.001206 788.372936278714 792.381312036369 48.449 0.55194 48.449 48.189 48.741 3.8147E-06 184 42 7 0 0 0 1.435E-18 2 26357 138.22 133.81 1 0.96629 0.97481 0 27302000 13835000 13467000 21381 1224 8087 8272 33544;33545 33544 LIIEEDTENENEK 13 1 0 Unmodified _LIIEEDTENENEK_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.3723 2 788.372857 1574.73116 68768.74 0.94468 0.00074476 0.83002 0.00065437 1.7747 0.0013991 788.874518027612 792.382029363786 47.329 0.57118 47.329 47.021 47.592 0 139 41 5 0 0 0 1.1717E-18 2 26201 140.49 133.83 1 0.80466 0.82111 0 25895000 13643000 12252000 21382 1224 8087 8272 33546;33547 33546 LIIQSSNGHITTTPTPTQFLCPK 23 1 0 Unmodified _LIIQSSNGHITTTPTPTQFLCPK_ 0 0 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 854.7885 3 852.115979 2553.32611 65508.59 0.97854 0.00083383 -0.053692 -4.5752E-05 0.92484 0.00078807 852.44991645999 855.121793217307 112.45 0.21319 112.45 112.29 112.5 0 25 11 4 0 0 0 0.01203 1 65320 20.891 20.891 1 1.1499 0.91417 0 2975700 1398700 1577000 21383 1447 8088 8273 33548 33548 LIIQSSNGHITTTPTPTQFLCPK 23 1 0 Unmodified _LIIQSSNGHITTTPTPTQFLCPK_ 0 0 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.7884 3 852.115979 2553.32611 64346.19 0.7253 0.00061804 0.40772 0.00034742 1.133 0.00096546 852.451094383962 855.121963262717 112.18 0.27238 112.18 112.01 112.28 -7.6294E-06 34 13 5 0 0 0 0.026926 1 64250 16.107 16.107 1 1.0332 0.82307 0 2392000 1050100 1341900 21384 1447 8088 8273 33549 33549 LILCDECNK 9 1 0 Unmodified _LILCDECNK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.7803 2 582.773016 1163.53148 NaN NaN NaN -0.51557 -0.00030046 NaN NaN NaN NaN 42.494 0.3503 42.494 42.267 42.617 0 0 0 0 0.0012496 1 22569 87.181 87.181 1 NaN NaN 0 82569000 0 82569000 21385 2103 8089 8274 33550 33550 LILCDECNK 9 1 0 Unmodified _LILCDECNK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.7809 2 582.773016 1163.53148 NaN NaN NaN 0.74272 0.00043284 NaN NaN NaN NaN 41.421 0.74596 41.421 40.939 41.685 0 0 0 0 0.00014688 1 22257 95.909 86.695 1 NaN NaN 0 25034000 0 25034000 21386 2103 8089 8274 33551 33551 LILCDECNK 9 1 0 Unmodified _LILCDECNK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.7803 2 582.773016 1163.53148 NaN NaN NaN -0.055249 -3.2198E-05 NaN NaN NaN NaN 48.455 1.8416 48.455 47.773 49.615 0 0 0 0 0.0068846 2 23223 71.379 67.023 1 NaN NaN 0 6653200 0 6653200 21387 2103 8089 8274 33552;33553 33553 LILFPR 6 0 1 Unmodified _LILFPR_ 0 0 0 Q6NZ55;A8K4C8;P26373 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.7496 2 379.749799 757.485045 97358.53 -0.10736 -4.0769E-05 0.65705 0.00024951 0.54969 0.00020875 379.74999284198 384.754058404737 87.6 1.4136 87.6 87.362 88.776 0 508 123 8 0 0 0 0.034273 2 53165 112.58 27.667 1 0.9519 1.1295 0 701820000 367630000 334200000 21388 733 8090 8275 33554;33555 33555 LILFPR 6 0 1 Unmodified _LILFPR_ 0 0 0 Q6NZ55;A8K4C8;P26373 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.7498 2 379.749799 757.485045 98075.95 -0.15124 -5.7434E-05 0.10267 3.8991E-05 -0.048567 -1.8443E-05 379.749629980649 384.754016332788 89.124 0.51034 89.124 88.776 89.286 0 93 38 4 0 0 0 0.042388 1 53668 105.82 27.82 1 0.93223 0.94748 0 27620000 13198000 14422000 21389 733 8090 8275 33556 33556 LILFPR 6 0 1 Unmodified _LILFPR_ 0 0 0 Q6NZ55;A8K4C8;P26373 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.7495 2 379.749799 757.485045 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.656 1 91.656 91.156 92.156 0 0 0 0 0.049101 1 55516 74.849 11.267 1 21390 733 8090 8275 33557 33557 LILFPR 6 0 1 Unmodified _LILFPR_ 0 0 0 Q6NZ55;A8K4C8;P26373 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 379.7498 2 379.749799 757.485045 95188.09 -0.012099 -4.5947E-06 0.37973 0.0001442 0.36763 0.00013961 379.749832885781 384.753977527697 99.907 1.217 99.907 99.664 100.88 -7.6294E-06 376 102 8 0 0 0 0.050046 1 55566 74.849 11.267 1 0.78396 0.68417 0 73597000 40092000 33504000 21391 733 8090 8275 33558 33558 LILGPQEEK 9 1 0 Unmodified _LILGPQEEK_ 0 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7959 2 513.795132 1025.57571 85530.15 0.44077 0.00022647 0.13846 7.114E-05 0.57923 0.00029761 513.795161254547 517.802196595688 50.817 0.39698 50.817 50.585 50.982 0 143 36 6 0 0 0 0.0014401 1 28110 85.38 75.229 1 0.68205 0.77057 0 82363000 50703000 31660000 21392 1681 8091 8276 33559 33559 LILGPQEEK 9 1 0 Unmodified _LILGPQEEK_ 0 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.8022 2 513.795132 1025.57571 80170.52 0.30611 0.00015728 -1.187 -0.00060986 -0.88087 -0.00045258 513.794996519928 517.802224163012 58.204 0.74208 58.204 57.816 58.558 3.8147E-06 243 49 6 0 0 0 0.041466 1 28880 41.448 41.448 1 1.2284 1.0027 0 4693300 2056900 2636400 21393 1681 8091 8276 33560 33560 LILIESR 7 0 1 Unmodified _LILIESR_ 0 0 0 P62277 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.2685 2 422.268553 842.522553 92145.52 0.17596 7.43E-05 -0.085315 -3.6026E-05 0.09064 3.8275E-05 422.268373979998 427.272555748705 68.158 1.4695 68.158 67.639 69.108 0 605 129 8 0 0 0 0.020619 2 39268 93.883 27.986 1 1.1416 1.3215 0 166240000 74492000 91744000 21394 1640 8092 8277 33561;33562 33562 LILIESR 7 0 1 Unmodified _LILIESR_ 0 0 0 P62277 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.2683 2 422.268553 842.522553 92090.22 -0.082727 -3.4933E-05 0.065097 2.7488E-05 -0.01763 -7.4446E-06 422.268413859887 427.272633714338 66.825 1.0108 66.825 66.439 67.449 0 506 84 8 0 0 0 0.026975 2 39563 84.244 31.561 1 1.1464 1.3102 0 153460000 69673000 83788000 21395 1640 8092 8277 33563;33564 33564 LILISTNGSFIR 12 0 1 Unmodified _LILISTNGSFIR_ 0 0 0 A0A024R333;Q6UXN9 A0A024R333 A0A024R333 TMEM113;WDR82 WD repeat-containing protein 82 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.4005 2 667.395544 1332.77654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.82 1 108.82 108.32 109.32 0 0 0 0 0.015866 1 69734 53.756 4.9601 1 21396 128 8093 8278 33565 33565 LILLITQVTASEK 13 1 0 Unmodified _LILLITQVTASEK_ 0 0 0 Q15061;Q8TB67 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.9446 2 714.937242 1427.85993 74749.95 0.95941 0.00068592 -0.31432 -0.00022472 0.64509 0.0004612 715.438458172099 718.944272418884 113.83 1.0497 113.83 113.48 114.53 7.6294E-06 283 75 6 0 0 0 0.00013105 2 71965 84.658 84.658 1 1.0084 1.0246 0 13737000 6456000 7280700 21397 1752 8094 8279 33566;33567 33566 LILLITQVTASEK 13 1 0 Unmodified _LILLITQVTASEK_ 0 0 0 Q15061;Q8TB67 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.9458 2 714.937242 1427.85993 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.95 1 114.95 114.45 115.45 0 0 0 0 0.0047294 1 73061 59.426 30.699 1 21398 1752 8094 8279 33568 33568 LILLITQVTASEK 13 1 0 Unmodified _LILLITQVTASEK_ 0 0 0 Q15061;Q8TB67 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.938 2 714.937242 1427.85993 74121.34 0.71267 0.00050951 -0.19825 -0.00014174 0.51441 0.00036777 715.438645492735 718.944309237486 113.15 1.0185 113.15 112.88 113.9 0 217 71 4 0 0 0 0.00015089 2 73343 84.658 84.658 1 0.95077 0.99591 0 10803000 5319200 5483900 21399 1752 8094 8279 33569;33570 33569 LILLITQVTASEK 13 1 0 Unmodified _LILLITQVTASEK_ 0 0 0 Q15061;Q8TB67 Q15061 Q15061 WDR43 WD repeat-containing protein 43 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.9451 2 714.937242 1427.85993 NaN NaN NaN -0.29055 -0.00020773 NaN NaN NaN NaN 114.25 0.40427 114.25 113.97 114.38 0 0 0 0 0.0013564 1 74234 76.143 47.416 1 NaN NaN 0 1733800 0 1733800 21400 1752 8094 8279 33571 33571 LILLITQVTASEK 13 1 0 Unmodified _LILLITQVTASEK_ 0 0 0 Q15061;Q8TB67 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.9448 2 714.937242 1427.85993 71655.99 0.85102 0.00060843 0.061198 4.3752E-05 0.91222 0.00065218 714.937198259981 718.944342969843 124.93 1.2494 124.93 124.64 125.89 0 251 52 8 0 0 0 9.4234E-05 2 74806 93.058 93.058 1 1.2373 0.9582 0 13100000 5993600 7106600 21401 1752 8094 8279 33572;33573 33572 LILLITQVTASEK 13 1 0 Unmodified _LILLITQVTASEK_ 0 0 0 Q15061;Q8TB67 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.9376 2 714.937242 1427.85993 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.71 1 125.71 125.21 126.21 -7.6294E-06 0 0 0 0.039885 1 75531 42.743 15.629 1 21402 1752 8094 8279 33574 33574 LILLITQVTASEK 13 1 0 Unmodified _LILLITQVTASEK_ 0 0 0 Q15061;Q8TB67 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.9453 2 714.937242 1427.85993 72384.95 0.81669 0.00058388 0.14481 0.00010353 0.9615 0.00068741 714.937309941148 718.944373800997 124.73 1.244 124.73 124.39 125.64 7.6294E-06 282 56 8 0 0 0 0.00010871 2 73734 91.855 91.855 1 1.1331 0.93331 0 12122000 5585900 6536200 21403 1752 8094 8279 33575;33576 33575 LILLWYNPVTEEDVQLR 17 0 1 Unmodified _LILLWYNPVTEEDVQLR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1056.5751 2 1051.07005 2100.12554 59387.43 0.69692 0.00073251 0.38318 0.00040275 1.0801 0.0011353 1051.57188716295 1056.07522575479 132.15 0.66637 132.15 131.9 132.57 0 307 44 10 0 0 0 7.1003E-07 4 86302 93.623 93.623 1 0.78155 0.80266 0 36299000 18817000 17482000 21404 1995 8095 8280 33577;33578;33579;33580 33579 LILLWYNPVTEEDVQLR 17 0 1 Unmodified _LILLWYNPVTEEDVQLR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1056.5769 2 1051.07005 2100.12554 59465.73 0.80812 0.00084939 -0.063134 -6.6358E-05 0.74499 0.00078303 1051.57142005592 1056.57574466804 131.72 0.69221 131.72 131.44 132.13 0 369 49 10 0 0 0 2.25E-09 3 88178 108.72 108.72 1 0.76527 0.87808 0 51989000 28377000 23612000 21405 1995 8095 8280 33581;33582;33583 33583 LILPHVPAILQYLSK 15 1 0 Unmodified _LILPHVPAILQYLSK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.6899 3 569.018548 1704.03381 80941.47 0.9351 0.00053209 -0.41603 -0.00023673 0.51907 0.00029536 569.018277252869 571.689656014558 130.74 0.83337 130.74 130.2 131.03 0 164 54 6 0 0 0 0.0097117 1 84959 18.391 18.391 1 1.1021 1.1206 0 4561300 1664700 2896600 21406 1412 8096 8281 33584 33584 LILPHVPAILQYLSK 15 1 0 Unmodified _LILPHVPAILQYLSK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.6896 3 569.018548 1704.03381 82111.63 0.86603 0.00049279 -0.36345 -0.00020681 0.50258 0.00028598 569.352578750533 571.689710892852 131.58 1.1445 131.58 130.92 132.07 0 243 75 6 0 0 0 2.4765E-06 2 85512 88.282 88.282 1 1.3458 1.4056 0 12168000 6039100 6129300 21407 1412 8096 8281 33585;33586 33585 LILPHVPAILQYLSK 15 1 0 Unmodified _LILPHVPAILQYLSK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.019 3 569.018548 1704.03381 NaN NaN NaN -0.81773 -0.0004653 NaN NaN NaN NaN 131.05 0.53073 131.05 130.71 131.25 0 0 0 0 0.054126 1 85425 24.935 18.054 1 NaN NaN 0 8867300 8867300 0 21408 1412 8096 8281 33587 33587 LILPHVPAILQYLSK 15 1 0 Unmodified _LILPHVPAILQYLSK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.0184 3 569.018548 1704.03381 NaN NaN NaN -0.22675 -0.00012903 NaN NaN NaN NaN 131.88 0.50064 131.88 131.6 132.1 0 0 0 0 0.0084083 1 86074 40.983 32.599 1 NaN NaN 0 3115400 3115400 0 21409 1412 8096 8281 33588 33588 LILPHVPAILQYLSK 15 1 0 Unmodified _LILPHVPAILQYLSK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.0195 3 569.018548 1704.03381 80200.84 0.79256 0.00045098 -0.24013 -0.00013664 0.55243 0.00031435 569.018407942575 571.689734252914 129.57 0.41098 129.57 129.27 129.68 0 78 22 5 0 0 0 0.0070578 1 86392 30.107 30.107 1 1.1687 1.2079 0 11420000 5328400 6091700 21410 1412 8096 8281 33589 33589 LILPHVPAILQYLSK 15 1 0 Unmodified _LILPHVPAILQYLSK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.69 3 569.018548 1704.03381 80200.83 0.81426 0.00046333 -0.42099 -0.00023955 0.39327 0.00022378 569.018213425603 571.689672157378 130.22 1.7855 130.22 129.52 131.3 0 377 123 5 0 0 0 5.0437E-06 3 87104 80.534 80.534 1 1.3358 1.3335 0 14237000 6525900 7710900 21411 1412 8096 8281 33590;33591;33592 33591 LILPHVPAILQYLSK 15 1 0 Unmodified _LILPHVPAILQYLSK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.019 3 569.018548 1704.03381 NaN NaN NaN -0.59129 -0.00033645 NaN NaN NaN NaN 131.08 0.46942 131.08 130.8 131.27 0 0 0 0 0.035234 1 87592 28.283 23.653 1 NaN NaN 0 2889800 2889800 0 21412 1412 8096 8281 33593 33593 LILQIGR 7 0 1 Unmodified _LILQIGR_ 0 0 0 A0A096LP10;A0A096LNJ4;A0A087WX43;A0A096LNL2;D6RE84;A0A087WTT9;A0A1B0GVW6;Q9NP73 A0A096LP10 A0A096LP10 ALG13 Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.7756 2 406.771263 811.527973 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.114 1 83.114 82.614 83.614 0 0 0 0 0.034306 1 49735 72.021 4.9859 1 21413 460 8097 8282 33594 33594 LILQIGR 7 0 1 Unmodified _LILQIGR_ 0 0 0 A0A096LP10;A0A096LNJ4;A0A087WX43;A0A096LNL2;D6RE84;A0A087WTT9;A0A1B0GVW6;Q9NP73 A0A096LP10 A0A096LP10 ALG13 Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.7752 2 406.771263 811.527973 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.769 1 81.769 81.269 82.269 0 0 0 0 0.014062 1 49987 85.306 5.8528 1 21414 460 8097 8282 33595 33595 LILYNDGDSLQYIER 15 0 1 Unmodified _LILYNDGDSLQYIER_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 906.9627 2 906.462341 1810.91013 62812.95 0.62463 0.0005662 0.23006 0.00020854 0.85468 0.00077474 906.462725805877 911.46667092193 105.62 0.54951 105.62 105.36 105.91 0 237 41 9 0 0 0 5.7507E-07 2 65345 100.93 100.93 1 0.95133 0.97325 0 32492000 17807000 14686000 21415 1604 8098 8283 33596;33597 33596 LILYNDGDSLQYIER 15 0 1 Unmodified _LILYNDGDSLQYIER_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 911.968 2 906.462341 1810.91013 63091 0.71285 0.00064617 0.40491 0.00036704 1.1178 0.0010132 906.462955958832 911.466625977185 105.05 0.61227 105.05 104.74 105.35 7.6294E-06 303 48 9 0 0 0 4.8022E-15 2 66554 126.76 126.76 1 0.93635 1.023 0 37287000 22643000 14643000 21416 1604 8098 8283 33598;33599 33599 LILYNDGDSLQYIER 15 0 1 Unmodified _LILYNDGDSLQYIER_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 906.9647 2 906.462341 1810.91013 63222.32 0.28938 0.00026231 0.2382 0.00021592 0.52758 0.00047823 906.461880365684 911.466530998239 116.92 0.68307 116.92 116.69 117.37 0 133 27 8 0 0 0 6.4503E-07 3 68737 100.04 100.04 1 1.2356 1.0096 0 14046000 6519100 7526600 21417 1604 8098 8283 33600;33601;33602 33602 LILYNDGDSLQYIER 15 0 1 Unmodified _LILYNDGDSLQYIER_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 911.9691 2 906.462341 1810.91013 63497.73 0.49791 0.00045134 0.11162 0.00010118 0.60953 0.00055252 906.964033577748 911.968325376919 116.79 0.687 116.79 116.48 117.17 -7.6294E-06 152 30 8 0 0 0 2.2849E-06 2 67721 98.803 98.803 1 1.1537 0.95406 0 14736000 7259200 7477200 21418 1604 8098 8283 33603;33604 33604 LIMLVNEFYYGR 12 0 1 Oxidation (M) _LIM(ox)LVNEFYYGR_ LIM(1)LVNEFYYGR LIM(50.29)LVNEFYYGR 0 1 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.3957 2 767.392144 1532.76974 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.71 1 111.71 111.21 112.21 7.6294E-06 0 0 0 0.010094 1 70385 50.292 23.619 1 21419 1924 8099 8284 33605 33605 1753 LINEGDVPHLPVNR 14 0 1 Unmodified _LINEGDVPHLPVNR_ 0 0 0 Q6RI45 Q6RI45 Q6RI45 BRWD3 Bromodomain and WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.2908 3 524.954606 1571.84199 89657.69 0.22329 0.00011722 0.29708 0.00015595 0.52037 0.00027317 524.955005796079 528.290731608423 86.801 0.34517 86.801 86.67 87.016 0 48 19 4 0 0 0 0.050319 1 47675 15.387 7.0022 1 1.8451 1.6214 0 1663500 777040 886470 21420 1860 8100 8285 33606 33606 LINKPGPDTFPDYGDVLR 18 1 1 Unmodified _LINKPGPDTFPDYGDVLR_ 0 0 1 Q59FG7;Q53F85;B2R7M0;A8K822;A0A024RCS3;B4E1C1;Q9UER7 Q59FG7 Q59FG7 DAXX Death domain-associated protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.3526 3 673.017823 2016.03164 75344.53 0.72537 0.00048818 -0.51023 -0.00034339 0.21514 0.00014479 673.018165432224 679.024643039161 107.9 0.36754 107.9 107.72 108.09 0 64 20 6 0 0 0 0.059719 1 61888 15.766 11.986 1 0.64355 0.57766 0 2014500 1365900 648550 21421 370 8101 8286 33607 33607 LINLVGESLR 10 0 1 Unmodified _LINLVGESLR_ 0 0 0 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;F6S6P2;X6REW1;A0A0G2JJM1 A0A0G2JL47 A0A0G2JL47 BAT3;BAG6 Large proline-rich protein BAG6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.339 2 557.334956 1112.65536 NaN NaN NaN 0.15696 8.748E-05 NaN NaN NaN NaN 92.968 0.48003 92.968 92.774 93.255 7.6294E-06 0 0 0 0.0037411 2 56372 75.378 35.16 1 NaN NaN 0 4218100 0 4218100 21422 368 8102 8287 33608;33609 33609 LINLVGESLR 10 0 1 Unmodified _LINLVGESLR_ 0 0 0 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;F6S6P2;X6REW1;A0A0G2JJM1 A0A0G2JL47 A0A0G2JL47 BAT3;BAG6 Large proline-rich protein BAG6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.3402 2 557.334956 1112.65536 84046.83 0.90227 0.00050287 0.58315 0.00032501 1.4854 0.00082787 557.335345105228 562.339046383604 91.95 0.49202 91.95 91.786 92.278 0 80 42 4 0 0 0 0.00078086 2 56956 81.338 42 1 1.5982 1.5858 0 15955000 5855800 10099000 21423 368 8102 8287 33610;33611 33611 LINNNPEIFGPLK 13 1 0 Unmodified _LINNNPEIFGPLK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.9124 2 734.911559 1467.80856 71625.08 0.90678 0.00066641 -0.002432 -1.7873E-06 0.90435 0.00066462 734.911305417401 738.918678947879 98.455 1.0138 98.455 97.954 98.968 -7.6294E-06 376 81 8 0 0 0 7.4568E-05 2 59948 94.692 59.252 1 0.90991 1.0285 0 83984000 44847000 39137000 21424 214 8103 8288 33612;33613 33613 LINNNPEIFGPLK 13 1 0 Unmodified _LINNNPEIFGPLK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.9197 2 734.911559 1467.80856 71394.73 0.77249 0.00056771 -0.026896 -1.9766E-05 0.7456 0.00054795 734.911396231389 738.918598689998 97.473 0.82652 97.473 97.145 97.971 0 376 64 8 0 0 0 1.6519E-09 2 60957 123.63 92.552 1 0.93707 1.0638 0 141320000 70041000 71279000 21425 214 8103 8288 33614;33615 33615 LINNNPEIFGPLK 13 1 0 Unmodified _LINNNPEIFGPLK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 738.9183 2 734.911559 1467.80856 71872.72 0.86687 0.00063708 0.20491 0.00015059 1.0718 0.00078767 734.911664114504 738.918617278202 111.09 0.87837 111.09 110.84 111.72 0 181 40 9 0 0 0 0.00014426 2 64243 83 53.913 1 1.235 0.98272 0 19481000 8727600 10753000 21426 214 8103 8288 33616;33617 33616 LINNNPEIFGPLK 13 1 0 Unmodified _LINNNPEIFGPLK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.9118 2 734.911559 1467.80856 71715.45 0.76152 0.00055965 0.00052126 3.8308E-07 0.76204 0.00056003 734.911598689965 738.91848501416 110.91 0.82545 110.91 110.62 111.45 0 213 40 8 0 0 0 7.4568E-05 2 63198 94.692 72.606 1 1.2547 1.0066 0 18636000 7174600 11461000 21427 214 8103 8288 33618;33619 33619 LINRPIIVFR 10 0 2 Unmodified _LINRPIIVFR_ 0 0 1 B3KTA3;Q16658;C9JPH9;C9JFC0;A0A0A0MSB2;B3KTM9 B3KTA3 B3KTA3 FSCN1 Fascin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 420.9399 3 414.267797 1239.78156 92384.19 0.23308 9.6558E-05 -0.0064681 -2.6795E-06 0.22661 9.3879E-05 414.267611941311 420.939917089015 80.691 0.75148 80.691 80.442 81.193 0 217 61 6 0 0 0 0.0019587 2 49141 61.78 61.78 1 3.2576 3.7054 0 37457000 8510400 28947000 21428 942 8104 8289 33620;33621 33620 LINRPIIVFR 10 0 2 Unmodified _LINRPIIVFR_ 0 0 1 B3KTA3;Q16658;C9JPH9;C9JFC0;A0A0A0MSB2;B3KTM9 B3KTA3 B3KTA3 FSCN1 Fascin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 420.94 3 414.267797 1239.78156 94229.45 -0.1692 -7.0093E-05 0.12001 4.9716E-05 -0.049188 -2.0377E-05 414.267683335937 420.940019192802 93.671 0.40162 93.671 93.505 93.906 0 83 27 4 0 0 0 0.059969 1 52309 26.043 26.043 1 1.3463 1.2299 0 2079100 801780 1277300 21429 942 8104 8289 33622 33622 LIPDGCGVK 9 1 0 Unmodified _LIPDGCGVK_ 0 0 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.7548 2 479.754953 957.495352 85740.48 0.039056 1.8737E-05 0.11866 5.6926E-05 0.15771 7.5664E-05 479.755062198963 483.761948284475 37.336 1.1509 37.336 36.757 37.908 0 359 91 8 0 0 0 0.019553 2 19264 51.059 43.909 1 0.84166 0.9915 0 536310000 276710000 259590000 21430 1524;1266 8105 8290 33623;33624 33623 LIPDGCGVK 9 1 0 Unmodified _LIPDGCGVK_ 0 0 0 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 479.7547 2 479.754953 957.495352 88122.65 0.1729 8.2951E-05 -0.066963 -3.2126E-05 0.10594 5.0825E-05 479.754834646502 483.761876087109 43.348 0.98288 43.348 42.908 43.891 0 197 64 4 0 0 0 0.02547 2 20363 47.849 47.849 1 1.0691 0.85329 0 20116000 9791500 10324000 21431 1524;1266 8105 8290 33625;33626 33626 LIPLLLSSLNDEVPEVR 17 0 1 Unmodified _LIPLLLSSLNDEVPEVR_ 0 0 0 Q86Y56;B3KU91;H0Y650;H7C3B1 Q86Y56 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.048 2 954.046041 1906.07753 NaN NaN NaN 0.47135 0.00044969 NaN NaN NaN NaN 131.33 0.21156 131.33 131.19 131.4 0 0 0 0 2.658E-07 1 87819 90.731 79.412 1 NaN NaN 0 3797100 0 3797100 21432 1888 8106 8291 33627 33627 LIPLLLSSLNDEVPEVR 17 0 1 Unmodified _LIPLLLSSLNDEVPEVR_ 0 0 0 Q86Y56;B3KU91;H0Y650;H7C3B1 Q86Y56 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 954.0446 2 954.046041 1906.07753 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.41 1 131.41 130.91 131.91 0 0 0 0 0.030235 1 87923 41.052 27.461 1 21433 1888 8106 8291 33628 33628 LIPTAR 6 0 1 Unmodified _LIPTAR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;B4DY21 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 335.7157 2 335.715956 669.41736 103935.1 -0.20715 -6.9542E-05 0.053829 1.8071E-05 -0.15332 -5.1471E-05 335.715823164886 340.72002712339 27.447 0.40404 27.447 27.205 27.609 1.9073E-06 70 21 6 0 0 0 0.036524 1 12727 120.06 24.68 1 1.1655 1.332 0 50441000 25754000 24687000 21434 2139 8107 8292 33629 33629 LIPTELR 7 0 1 Unmodified _LIPTELR_ 0 0 0 H0Y714;Q96G21;B8ZZ47;F8WCN0 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.2645 2 421.260728 840.506903 94428.91 0.31647 0.00013332 0.43433 0.00018297 0.7508 0.00031628 421.260921938428 426.264774615431 58.51 0.49527 58.51 58.257 58.753 0 149 41 6 0 0 0 0.034211 1 33976 62.714 26.127 1 1.1809 1.3416 0 48799000 24763000 24036000 21435 1286 8108 8293 33630 33630 LIPTELRR 8 0 2 Unmodified _LIPTELRR_ 0 0 1 H0Y714;Q96G21;B8ZZ47;F8WCN0 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 333.2099 3 333.209948 996.608014 105477.6 0.029203 9.7306E-06 -0.10626 -3.5406E-05 -0.077054 -2.5675E-05 333.210015232973 339.882092915713 40.613 0.46564 40.613 40.37 40.835 0 135 42 5 0 0 0 0.0073307 1 21282 52.716 35.62 1 0.98487 1.0675 0 25575000 12880000 12695000 21436 1286 8109 8294 33631 33631 LIPVHQVR 8 0 1 Unmodified _LIPVHQVR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 321.2027 3 321.202905 960.586885 106490.2 0.16792 5.3938E-05 -0.11389 -3.6583E-05 0.05403 1.7354E-05 321.202787764918 324.538908749912 29.06 0.57034 29.06 28.96 29.53 1.9073E-06 132 38 7 0 0 0 0.0023719 2 13964 81.784 71.074 1 0.88145 1.0208 0 167450000 87654000 79799000 21437 876 8110 8295 33632;33633 33633 LIPVHQVR 8 0 1 Unmodified _LIPVHQVR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 321.2029 3 321.202905 960.586885 106082.7 0.18921 6.0774E-05 0.26327 8.4562E-05 0.45247 0.00014534 321.202923323036 324.538990346972 28.195 0.36359 28.195 28.076 28.44 0 77 19 8 0 0 0 0.0023719 2 13376 81.784 67.115 1 0.92714 1.0586 0 147080000 75588000 71488000 21438 876 8110 8295 33634;33635 33635 LIPVHQVR 8 0 1 Unmodified _LIPVHQVR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 321.2028 3 321.202905 960.586885 102132.2 -0.31013 -9.9615E-05 0.46753 0.00015017 0.1574 5.0558E-05 321.202989940094 324.539077721342 32.827 0.24364 32.827 32.73 32.974 0 54 11 8 0 0 0 0.014528 2 14276 44.767 38.986 1 1.2766 1.0888 0 36966000 15386000 21579000 21439 876 8110 8295 33636;33637 33637 LIPVHQVR 8 0 1 Unmodified _LIPVHQVR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.3049 2 481.300719 960.586885 86447.27 -0.057762 -2.7801E-05 0.46712 0.00022483 0.40936 0.00019703 481.300749279208 486.304976033416 32.841 0.18752 32.841 32.73 32.918 0 39 8 7 0 0 0 0.049834 1 14278 49.358 49.358 1 1.3232 1.0843 0 12777000 5488700 7288300 21440 876 8110 8295 33638 33638 LIPVHQVR 8 0 1 Unmodified _LIPVHQVR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 321.2027 3 321.202905 960.586885 105221.5 -0.17194 -5.5226E-05 0.3572 0.00011473 0.18527 5.9508E-05 321.202952269137 324.539017870428 32.833 0.26245 32.833 32.715 32.977 0 44 10 7 0 0 0 0.0075041 2 13767 55.902 49.166 1 1.3909 1.2133 0 25818000 10403000 15415000 21441 876 8110 8295 33639;33640 33639 LIPVHQVR 8 0 1 Unmodified _LIPVHQVR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.3047 2 481.300719 960.586885 86128.88 0.23339 0.00011233 0.21766 0.00010476 0.45105 0.00021709 481.300690646735 486.304861994766 32.804 0.22477 32.804 32.715 32.939 0 31 8 6 0 0 0 0.028561 1 13768 59.205 59.205 1 1.4622 1.1857 0 10244000 4025800 6218700 21442 876 8110 8295 33641 33641 LIQDQQEQIQHLK 13 1 0 Unmodified _LIQDQQEQIQHLK_ 0 0 0 Q92878 Q92878 Q92878 RAD50 DNA repair protein RAD50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.9623 3 540.96165 1619.86312 80650.94 0.88029 0.0004762 -0.13842 -7.4882E-05 0.74187 0.00040132 540.961429280211 543.633234162381 42.673 0.43709 42.673 42.49 42.927 0 123 36 5 0 0 0 0.009681 1 22795 33.273 33.273 1 0.7361 0.72639 0 19421000 9623700 9797700 21443 1953 8111 8296 33642 33642 LIQDQQEQIQHLK 13 1 0 Unmodified _LIQDQQEQIQHLK_ 0 0 0 Q92878 Q92878 Q92878 RAD50 DNA repair protein RAD50 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.9625 3 540.96165 1619.86312 NaN NaN NaN 0.16017 8.6644E-05 NaN NaN NaN NaN 41.81 0.42426 41.81 41.581 42.005 0 0 0 0 0.0047545 1 22420 37.869 26.396 1 NaN NaN 0 12472000 12472000 0 21444 1953 8111 8296 33643 33643 LIQDQQEQIQHLK 13 1 0 Unmodified _LIQDQQEQIQHLK_ 0 0 0 Q92878 Q92878 Q92878 RAD50 DNA repair protein RAD50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.6334 3 540.96165 1619.86312 81586.19 0.4988 0.00026983 0.082236 4.4486E-05 0.58103 0.00031432 541.295727580407 543.633151787002 49.763 0.36811 49.763 49.597 49.965 0 114 29 5 0 0 0 0.019827 1 24310 26.124 26.124 1 0.56569 0.43924 0 3447000 2141200 1305800 21445 1953 8111 8296 33644 33644 LIQEIVDK 8 1 0 Unmodified _LIQEIVDK_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.2839 2 479.2844 956.554247 91527.88 0.31074 0.00014893 0.088998 4.2655E-05 0.39974 0.00019159 479.284401338001 483.291438883557 56.042 0.74772 56.042 55.823 56.571 -3.8147E-06 168 61 6 0 0 0 0.022631 1 31547 57.047 18.241 1 1.2912 1.3934 0 41871000 14998000 26873000 21446 1689 8112 8297 33645 33645 LIQEQHPEEELIK 13 1 0 Unmodified _LIQEQHPEEELIK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.6259 3 535.954272 1604.84099 NaN NaN NaN -0.061948 -3.3201E-05 NaN NaN NaN NaN 63.588 0.33303 63.588 63.432 63.765 -3.8147E-06 0 0 0 0.032904 1 32660 32.734 25.695 1 NaN NaN 0 2448800 0 2448800 21447 523 8113 8298 33646 33646 LIQEQHPEEELIK 13 1 0 Unmodified _LIQEQHPEEELIK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.6252 3 535.954272 1604.84099 NaN NaN NaN -0.18608 -9.9729E-05 NaN NaN NaN NaN 64.101 0.47617 64.101 63.881 64.357 0 0 0 0 0.046417 1 32296 28.632 21.593 1 NaN NaN 0 1635800 0 1635800 21448 523 8113 8298 33647 33647 LIQIAAR 7 0 1 Unmodified _LIQIAAR_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.7596 2 392.755613 783.496673 98794.48 0.24403 9.5843E-05 -1.2083 -0.00047456 -0.96426 -0.00037872 392.755374870737 397.758836379885 47.033 0.45667 47.033 46.736 47.193 0 183 40 6 0 0 0 0.026743 2 25919 77.748 4.2792 1 0.73147 0.75238 0 21280000 12772000 8508800 21449 49 8114 8299 33648;33649 33648 LIQPGTFTK 9 1 0 Unmodified _LIQPGTFTK_ 0 0 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.8 2 502.792392 1003.57023 87930.66 0.51321 0.00025804 -0.32891 -0.00016537 0.18431 9.2667E-05 502.792130706303 506.799276939586 56.352 0.6307 56.352 56.063 56.694 0 168 55 4 0 0 0 0.025003 2 31638 48.036 2.1538 1 1.093 1.0717 0 22573000 12067000 10506000 21450 1075 8115 8300 33650;33651 33651 LIQPGTFTK 9 1 0 Unmodified _LIQPGTFTK_ 0 0 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.7993 2 502.792392 1003.57023 85699.53 0.10389 5.2234E-05 -0.53674 -0.00026987 -0.43285 -0.00021763 502.792232128675 506.79938858223 55.29 0.90271 55.29 54.925 55.828 0 153 53 5 0 0 0 0.020055 1 31594 50.607 11.634 1 0.94456 1.0098 0 21103000 11286000 9817200 21451 1075 8115 8300 33652 33652 LIQPGTFTK 9 1 0 Unmodified _LIQPGTFTK_ 0 0 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.7996 2 502.792392 1003.57023 87957.88 0.3592 0.0001806 -0.22222 -0.00011173 0.13698 6.8874E-05 502.792180865197 506.799236844737 64.982 0.70432 64.982 64.61 65.314 0 164 52 4 0 0 0 0.010363 1 33421 59.35 11.501 1 1.7283 1.3441 0 3391400 1321000 2070400 21452 1075 8115 8300 33653 33653 LIQPGTFTK 9 1 0 Unmodified _LIQPGTFTK_ 0 0 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.7996 2 502.792392 1003.57023 87867.47 0.086141 4.3311E-05 -0.091445 -4.5978E-05 -0.005304 -2.6668E-06 502.792216716332 506.799395611117 65.359 0.6693 65.359 64.952 65.621 0 145 49 4 0 0 0 0.034146 1 32896 44.377 14.192 1 1.8061 1.4648 0 2802400 1117300 1685100 21453 1075 8115 8300 33654 33654 LIQQQLEK 8 1 0 Unmodified _LIQQQLEK_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.3029 2 500.295299 998.576045 NaN NaN NaN -0.29361 -0.00014689 NaN NaN NaN NaN 32.052 0.48186 32.052 31.819 32.301 -3.8147E-06 0 0 0 0.038104 1 15759 54.611 0.40646 1 NaN NaN 0 8327900 0 8327900 21454 1794 8116 8301 33655 33655 LIQQQLEK 8 1 0 Unmodified _LIQQQLEK_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.303 2 500.295299 998.576045 87415.16 0.21521 0.00010767 -0.46639 -0.00023333 -0.25118 -0.00012566 500.294979801579 504.302300116441 31.334 0.44948 31.334 31.176 31.626 0 129 39 6 0 0 0 0.012587 1 15412 67.277 13.072 1 1.2059 1.253 0 18909000 8546200 10362000 21455 1794 8116 8301 33656 33656 LIQSHPESAEDLQEK 15 1 0 Unmodified _LIQSHPESAEDLQEK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 866.9354 2 862.428498 1722.84244 NaN NaN NaN 0.096135 8.2909E-05 NaN NaN NaN NaN 32.314 0.2908 32.314 32.221 32.512 0 0 0 0 0.0013282 1 15982 66.056 39.542 1 NaN NaN 0 6439700 0 6439700 21456 523 8117 8302 33657 33657 LIQSHPESAEDLQEK 15 1 0 Unmodified _LIQSHPESAEDLQEK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.9595 3 575.288091 1722.84244 NaN NaN NaN -0.10417 -5.9927E-05 NaN NaN NaN NaN 32.316 0.39112 32.316 32.165 32.556 -3.8147E-06 0 0 0 0.00093131 1 16060 61.265 35.399 1 NaN NaN 0 20060000 0 20060000 21457 523 8117 8302 33658 33658 LIQSHPESAEDLQEK 15 1 0 Unmodified _LIQSHPESAEDLQEK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.4366 2 862.428498 1722.84244 NaN NaN NaN 0.62175 0.00053622 NaN NaN NaN NaN 31.541 0.18023 31.541 31.397 31.577 0 0 0 0 2.197E-10 1 15565 109.84 83.906 1 NaN NaN 0 6477400 0 6477400 21458 523 8117 8302 33659 33659 LIQSHPESAEDLQEK 15 1 0 Unmodified _LIQSHPESAEDLQEK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.9598 3 575.288091 1722.84244 77937.38 0.39551 0.00022753 0.1249 7.1855E-05 0.52041 0.00029939 575.288057131974 577.959343354592 37.422 0.41974 37.422 37.254 37.674 0 117 30 7 0 0 0 0.055337 1 16839 23.831 23.831 1 3.0176 2.3542 0 3283900 859090 2424800 21459 523 8117 8302 33660 33660 LIQSHPESAEDLQEK 15 1 0 Unmodified _LIQSHPESAEDLQEK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.9598 3 575.288091 1722.84244 NaN NaN NaN 0.287 0.00016511 NaN NaN NaN NaN 37.613 0.40924 37.613 37.394 37.804 0 0 0 0 0.0095322 1 16468 40.278 23.339 1 NaN NaN 0 2515800 0 2515800 21460 523 8117 8302 33661 33661 LISEILSESVVPDVR 15 0 1 Unmodified _LISEILSESVVPDVR_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;J3QKS7 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.9648 2 828.464352 1654.91415 NaN NaN NaN -0.40324 -0.00033407 NaN NaN NaN NaN 117.32 0.6333 117.32 117.01 117.64 0 0 0 0 0.0091227 2 75317 51.841 44.953 1 NaN NaN 0 17337000 17337000 0 21461 86 8118 8303 33662;33663 33663 LISEILSESVVPDVR 15 0 1 Unmodified _LISEILSESVVPDVR_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;J3QKS7 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.4694 2 828.464352 1654.91415 67941.26 0.80613 0.00066785 0.43302 0.00035874 1.2392 0.0010266 828.464124809887 833.469015235067 116.81 0.76363 116.81 116.5 117.26 0 198 46 7 0 0 0 4.2362E-16 2 76455 136.96 136.96 1 0.7599 0.83105 0 34834000 20548000 14286000 21462 86 8118 8303 33664;33665 33665 LISEILSESVVPDVR 15 0 1 Unmodified _LISEILSESVVPDVR_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;J3QKS7 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.4705 2 828.464352 1654.91415 68253.28 0.8698 0.0007206 0.5476 0.00045367 1.4174 0.0011743 828.464407834794 833.468342851504 129.17 0.67081 129.17 128.91 129.58 0 141 31 8 0 0 0 1.28E-07 2 78084 110.08 110.08 1 1.0369 0.86704 0 3729100 1816200 1912900 21463 86 8118 8303 33666;33667 33667 LISEILSESVVPDVR 15 0 1 Unmodified _LISEILSESVVPDVR_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;J3QKS7 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 828.4651 2 828.464352 1654.91415 68800.75 1.0127 0.00083902 0.64628 0.00053542 1.659 0.0013744 828.966260457475 833.468462236332 128.99 0.64102 128.99 128.72 129.36 0 78 25 8 0 0 0 7.3119E-06 2 77093 95.018 95.018 1 1.122 0.93289 0 6042100 2941400 3100700 21464 86 8118 8303 33668;33669 33669 LISGEEHFSSK 11 1 0 Unmodified _LISGEEHFSSK_ 0 0 0 E9PQV9;A0A024R3A2;Q9BTE7;H0YCN4 E9PQV9 E9PQV9 DCUN1D5 DCN1-like protein;DCN1-like protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.3164 2 617.309135 1232.60372 79281.36 0.44675 0.00027578 -0.39198 -0.00024197 0.054772 3.3811E-05 617.309213835659 621.31609221444 27.141 0.41926 27.141 26.786 27.205 0 35 19 4 0 0 0 0.0015777 1 12470 66.435 55.27 1 2.4589 2.5386 0 11469000 3682400 7786600 21465 132 8119 8304 33670 33670 LISIWSR 7 0 1 Unmodified _LISIWSR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 437.7604 2 437.760895 873.507237 93516.09 -0.032822 -1.4368E-05 0.38566 0.00016883 0.35284 0.00015446 437.761013285865 442.765038616796 83.994 0.6027 83.994 83.625 84.228 0 124 48 4 0 0 0 0.020239 1 50301 94.262 57.675 1 1.0452 1.0739 0 25457000 14050000 11407000 21466 1412 8120 8305 33671 33671 LISIWSR 7 0 1 Unmodified _LISIWSR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.7605 2 437.760895 873.507237 93126.89 0.030639 1.3412E-05 0.021493 9.4088E-06 0.052132 2.2821E-05 437.760826956496 442.76487233421 82.779 0.55669 82.779 82.467 83.024 0 143 44 4 0 0 0 0.010624 1 50662 110.63 74.046 1 1.0126 1.0193 0 19397000 9219400 10178000 21467 1412 8120 8305 33672 33672 LISLFQAMK 9 1 0 Oxidation (M) _LISLFQAM(ox)K_ LISLFQAM(1)K LISLFQAM(98.3)K 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.8091 2 533.801903 1065.58925 83062.95 0.61735 0.00032954 -0.76246 -0.000407 -0.14511 -7.746E-05 533.801072615997 537.808393005037 87.075 0.15515 87.075 86.975 87.13 0 34 10 5 0 0 0 0.00024528 2 52550 98.299 71.697 1 3.2259 3.5593 0 56365000 15828000 40537000 21468 1754 8121 8306 33673;33674 33673 1614 LISLFQAMK 9 1 0 Oxidation (M) _LISLFQAM(ox)K_ LISLFQAM(1)K LISLFQAM(101.28)K 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.809 2 533.801903 1065.58925 82266.54 0.82296 0.0004393 -0.4153 -0.00022169 0.40766 0.00021761 533.80156023655 537.808622608094 85.93 0.18559 85.93 85.831 86.017 0 47 13 5 0 0 0 0.00016776 1 52960 101.28 74.682 1 3.1551 3.5405 0 55245000 13515000 41730000 21469 1754 8121 8306 33675 33675 1614 LISLPLSR 8 0 1 Unmodified _LISLPLSR_ 0 0 0 E5RGS9;Q9NRG0 E5RGS9 E5RGS9 CHRAC1 Chromatin accessibility complex protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.7934 2 449.789653 897.564752 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.13 1 89.13 88.63 89.63 0 0 0 0 0.0109 1 53800 75.738 21.984 1 21470 1212 8122 8307 33676 33676 LISLPLSR 8 0 1 Unmodified _LISLPLSR_ 0 0 0 E5RGS9;Q9NRG0 E5RGS9 E5RGS9 CHRAC1 Chromatin accessibility complex protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.7926 2 449.789653 897.564752 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.99 1 87.99 87.49 88.49 0 0 0 0 0.0055897 1 54282 83.206 36.78 1 21471 1212 8122 8307 33677 33677 LISPLASPADGVK 13 1 0 Unmodified _LISPLASPADGVK_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.3743 2 634.366453 1266.71835 80507.09 0.8712 0.00055266 -0.51119 -0.00032428 0.36 0.00022837 634.366167717671 638.373308248435 80.131 0.51846 80.131 79.964 80.483 0 186 43 6 0 0 0 0.0052306 1 47576 47.559 37.872 1 1.378 1.4892 0 35322000 11239000 24083000 21472 1945 8123 8308 33678 33678 LISPLASPADGVK 13 1 0 Unmodified _LISPLASPADGVK_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3739 2 634.366453 1266.71835 78568.73 0.60498 0.00038378 0.12871 8.1647E-05 0.73369 0.00046543 634.36630928301 638.373598274223 79.137 0.52164 79.137 78.887 79.409 0 199 46 6 0 0 0 0.001556 1 47977 57.348 47.661 1 1.2892 1.3311 0 32819000 15620000 17199000 21473 1945 8123 8308 33679 33679 LISPLASPADGVK 13 1 0 Unmodified _LISPLASPADGVK_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.3741 2 634.366453 1266.71835 78281.8 0.68147 0.0004323 -0.64335 -0.00040812 0.038113 2.4177E-05 634.365617084999 638.373256633187 91.446 0.66379 91.446 91.199 91.863 7.6294E-06 201 48 6 0 0 0 0.0044503 1 50794 48.44 38.068 1 1.4096 1.1226 0 6736500 2263000 4473400 21474 1945 8123 8308 33680 33680 LISPLASPADGVK 13 1 0 Unmodified _LISPLASPADGVK_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.3732 2 634.366453 1266.71835 75716.28 0.56384 0.00035768 -0.50472 -0.00032018 0.059123 3.7506E-05 634.365691153802 638.373308524541 91.275 0.56402 91.275 91.018 91.582 0 191 40 7 0 0 0 0.0035111 2 49817 49.5 42.612 1 1.33 1.0825 0 6967100 2879100 4088000 21475 1945 8123 8308 33681;33682 33681 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.9451 2 744.443223 1486.87189 70342.63 0.77816 0.00057929 0.091639 6.822E-05 0.86979 0.00064751 744.443631094331 749.447383866271 128.19 1.0964 128.19 127.92 129.02 0 560 73 12 0 0 0 2.1949E-46 5 83909 176.78 176.78 1 1.4739 1.7495 0 776170000 308960000 467210000 21476 922;1257;1659 8124 8309 33683;33684;33685;33686;33687 33685 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.4484 2 744.443223 1486.87189 71810.73 0.94626 0.00070444 -0.21625 -0.00016098 0.73002 0.00054346 744.442731774898 749.447371635594 130.27 0.23546 130.27 130.18 130.42 1.5259E-05 55 16 5 0 0 0 0.00011089 1 84975 83.397 83.397 1 1.3 1.3482 0 5737600 2685600 3052000 21477 922;1257;1659 8124 8309 33688 33688 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.4491 2 744.443223 1486.87189 70815.85 0.85132 0.00063376 -0.25712 -0.00019141 0.5942 0.00044235 744.442682089053 749.447347992757 143.18 0.7108 143.18 142.86 143.57 0 269 73 6 0 0 0 0.0001395 1 90802 78.548 78.548 1 1.5411 1.6681 0 2176600 888970 1287700 21478 922;1257;1659 8124 8309 33689 33689 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.4494 2 744.443223 1486.87189 NaN NaN NaN -0.26762 -0.00019923 NaN NaN NaN NaN 142.73 0.38753 142.73 142.48 142.87 0 0 0 0 0.00053133 1 90587 78.653 52.534 1 NaN NaN 0 577520 0 577520 21479 922;1257;1659 8124 8309 33690 33690 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.444 2 744.443223 1486.87189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.56 1 129.56 129.06 130.06 0 0 0 0 0.00044406 1 84430 83.314 55.146 1 21480 922;1257;1659 8124 8309 33691 33691 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.4463 2 744.443223 1486.87189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 142.77 1 142.77 142.27 143.27 0 0 0 0 0.032932 1 90629 42.743 22.414 1 21481 922;1257;1659 8124 8309 33692 33692 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.4496 2 744.443223 1486.87189 73950.95 1.1783 0.00087721 -0.57857 -0.00043071 0.59978 0.0004465 744.442374348303 749.447154275982 129.66 0.39035 129.66 129.47 129.86 0 59 23 6 0 0 0 2.6598E-09 1 84428 130.56 130.56 1 1.4409 1.4478 0 9235800 4428100 4807700 21482 922;1257;1659 8124 8309 33693 33693 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.443 2 744.443223 1486.87189 70361.55 0.97292 0.00072428 0.54495 0.00040569 1.5179 0.00113 744.445423019429 749.448255139502 127.85 0.4405 127.85 127.45 127.89 0 253 27 11 0 0 0 1.6262E-09 2 85168 119.39 95.356 1 1.4287 1.7088 0 3794400000 1598200000 2196100000 21483 922;1257;1659 8124 8309 33694;33695 33695 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.4444 2 744.443223 1486.87189 70219.25 0.94769 0.0007055 0.1601 0.00011918 1.1078 0.00082468 744.443372006815 749.447434357335 128.01 0.74278 128.01 127.89 128.64 0 335 51 10 0 0 0 3.0636E-14 3 85744 128.08 128.08 1 1.424 1.6559 0 390080000 158590000 231490000 21484 922;1257;1659 8124 8309 33696;33697;33698 33697 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.4486 2 744.443223 1486.87189 72365.83 0.76729 0.0005712 -0.04386 -3.2651E-05 0.72343 0.00053855 744.944417896108 749.447850357621 129.09 0.70122 129.09 128.82 129.52 0 111 50 5 0 0 0 8.8581E-07 1 86174 110.08 110.08 1 1.7031 1.6888 0 15823000 5388000 10435000 21485 922;1257;1659 8124 8309 33699 33699 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.4473 2 744.443223 1486.87189 71793.49 0.36038 0.00026828 0.1788 0.00013311 0.53918 0.00040139 744.44282498534 749.447665748114 142.88 0.93289 142.88 142.43 143.37 0 231 99 4 0 0 0 8.7491E-05 2 92201 87.363 87.363 1 1.5719 1.7059 0 2535500 851110 1684400 21486 922;1257;1659 8124 8309 33700;33701 33700 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.9446 2 744.443223 1486.87189 NaN NaN NaN -0.84472 -0.00062885 NaN NaN NaN NaN 129.06 0.20975 129.06 128.91 129.12 0 0 0 0 1.1915E-09 1 86188 110.08 93.137 1 NaN NaN 0 4303700 4303700 0 21487 922;1257;1659 8124 8309 33702 33702 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.4488 2 744.443223 1486.87189 NaN NaN NaN 0.076537 5.6977E-05 NaN NaN NaN NaN 129.8 1.2506 129.8 129.7 130.95 0 0 0 0 5.3742E-06 2 86724 93.959 68.301 1 NaN NaN 0 6330100 0 6330100 21488 922;1257;1659 8124 8309 33703;33704 33703 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.4468 2 744.443223 1486.87189 NaN NaN NaN -0.5498 -0.00040929 NaN NaN NaN NaN 132.2 0.12459 132.2 132.16 132.29 0 0 0 0 0.0016066 1 88546 69.672 51.807 1 NaN NaN 0 1621000 0 1621000 21489 922;1257;1659 8124 8309 33705 33705 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.4415 2 744.443223 1486.87189 NaN NaN NaN -0.4992 -0.00037163 NaN NaN NaN NaN 142.66 0.25912 142.66 142.5 142.76 -1.5259E-05 0 0 0 0.0053621 1 92154 55.426 26.683 1 NaN NaN 0 712250 712250 0 21490 922;1257;1659 8124 8309 33706 33706 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.4434 2 744.443223 1486.87189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.98 1 129.98 129.48 130.48 0 0 0 0 0.001841 1 86854 69.01 49.224 1 21491 922;1257;1659 8124 8309 33707 33707 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.4458 2 744.443223 1486.87189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.46 1 131.46 130.96 131.96 0 0 0 0 0.00065682 1 87955 80.763 41.745 1 21492 922;1257;1659 8124 8309 33708 33708 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.4473 2 744.443223 1486.87189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 143.56 1 143.56 143.06 144.06 0 0 0 0 0.0020295 1 92407 67.153 38.066 1 21493 922;1257;1659 8124 8309 33709 33709 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.9536 2 744.443223 1486.87189 70678.53 0.91023 0.00067762 0.052607 3.9163E-05 0.96284 0.00071678 744.442871119003 749.44723742359 134.89 0.44527 134.89 134.75 135.19 0 31 13 9 0 0 0 5.0927E-21 3 82538 141.73 141.73 1 1.0777 0.93147 0 106300000 51382000 54915000 21494 922;1257;1659 8124 8309 33710;33711;33712 33710 LISQIVSSITASLR 14 0 1 Unmodified _LISQIVSSITASLR_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q9H853;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366 B3KT06;Q53GA7;P68366 B3KT06 TUBA1B;TUBA4A;TUBA4B;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 749.4481 2 744.443223 1486.87189 69918.68 0.95887 0.00071382 0.3543 0.00026376 1.3132 0.00097758 744.443251157999 749.447477186547 134.84 0.23338 134.84 134.66 134.9 0 23 4 11 0 0 0 2.8792E-14 2 81670 128.67 128.67 1 1.0131 0.8845 0 121520000 60421000 61099000 21495 922;1257;1659 8124 8309 33713;33714 33713 LISWYDNEFGYSNR 14 0 1 Unmodified _LISWYDNEFGYSNR_ 0 0 0 V9HVZ4;P04406;Q2TSD0;E7EUT5 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.4064 2 882.404826 1762.7951 NaN NaN NaN 0.30352 0.00026782 NaN NaN NaN NaN 102.35 1.0704 102.35 101.98 103.05 -7.6294E-06 0 0 0 0.016025 1 62757 48.004 42.159 1 NaN NaN 0 44571000 0 44571000 21496 1442 8125 8310 33715 33715 LISWYDNEFGYSNR 14 0 1 Unmodified _LISWYDNEFGYSNR_ 0 0 0 V9HVZ4;P04406;Q2TSD0;E7EUT5 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.4092 2 882.404826 1762.7951 NaN NaN NaN 0.29875 0.00026362 NaN NaN NaN NaN 101.76 1.1833 101.76 101.24 102.43 0 0 0 0 3.8827E-06 2 64364 97.214 90.167 1 NaN NaN 0 43724000 0 43724000 21497 1442 8125 8310 33716;33717 33717 LISWYDNEFGYSNR 14 0 1 Unmodified _LISWYDNEFGYSNR_ 0 0 0 V9HVZ4;P04406;Q2TSD0;E7EUT5 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 882.907 2 882.404826 1762.7951 64121.62 0.95334 0.00084123 -0.67221 -0.00059316 0.28113 0.00024807 882.404055719238 887.40832911588 114.06 0.83084 114.06 113.76 114.59 0 198 36 9 0 0 0 0.00015067 2 66499 76.655 76.655 1 1.5958 1.3096 0 12177000 4700400 7476600 21498 1442 8125 8310 33718;33719 33719 LISWYDNEFGYSNR 14 0 1 Unmodified _LISWYDNEFGYSNR_ 0 0 0 V9HVZ4;P04406;Q2TSD0;E7EUT5 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 882.9056 2 882.404826 1762.7951 64327.25 0.35102 0.00030974 -0.12453 -0.00010989 0.22649 0.00019986 882.906215093238 887.408902450289 113.96 0.88963 113.96 113.71 114.6 0 202 38 9 0 0 0 0.00022162 2 65483 66.262 64.205 1 1.8058 1.4745 0 12951000 4461000 8489600 21499 1442 8125 8310 33720;33721 33721 LITAADTTAEQR 12 0 1 Unmodified _LITAADTTAEQR_ 0 0 0 B4DQG8;Q9NPF5;Q5TG40 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3401 2 645.338424 1288.66229 NaN NaN NaN 1.1138 0.00071876 NaN NaN NaN NaN 34.88 0.41321 34.88 34.688 35.101 0 0 0 0 4.5742E-05 1 17551 95.483 66.396 1 NaN NaN 0 8991200 8991200 0 21500 1024 8126 8311 33722 33722 LITAADTTAEQR 12 0 1 Unmodified _LITAADTTAEQR_ 0 0 0 B4DQG8;Q9NPF5;Q5TG40 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.3392 2 645.338424 1288.66229 76307.07 0.37819 0.00024406 0.53457 0.00034498 0.91276 0.00058904 645.339061951966 650.342696528289 39.986 0.4073 39.986 39.725 40.133 0 134 32 7 0 0 0 0.0032963 2 17812 56.404 38.093 1 0.61835 0.5261 0 4593200 2792800 1800300 21501 1024 8126 8311 33723;33724 33724 LITDLQDQNQK 11 1 0 Unmodified _LITDLQDQNQK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;M1V490;M1VPF9;B4DS27 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020975)_K22;R12 Kinesin-like protein;Kinesin-1 heavy chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.3459 2 658.346249 1314.67794 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.215 1 43.215 42.715 43.715 0 0 0 0 0.019474 1 23098 53.756 16.281 1 21502 1186 8127 8312 33725 33725 LITDLQDQNQK 11 1 0 Unmodified _LITDLQDQNQK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;M1V490;M1VPF9;B4DS27 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020975)_K22;R12 Kinesin-like protein;Kinesin-1 heavy chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.347 2 658.346249 1314.67794 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.809 1 42.809 42.309 43.309 0 0 0 0 0.00017173 1 23145 80.688 31.894 1 21503 1186 8127 8312 33726 33726 LITEDVQGK 9 1 0 Unmodified _LITEDVQGK_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.286 2 501.776939 1001.53933 86002.16 0.42087 0.00021118 -0.090984 -4.5654E-05 0.32988 0.00016553 501.77684707399 505.783865848586 33.696 1.319 33.696 33.133 34.452 0 666 125 8 0 0 0 0.0015501 4 16636 95.531 60.351 1 0.9866 1.1501 0 266260000 127450000 138820000 21504 742 8128 8313 33727;33728;33729;33730 33728 LITEDVQGK 9 1 0 Unmodified _LITEDVQGK_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.7772 2 501.776939 1001.53933 85530.41 0.055826 2.8012E-05 0.24497 0.00012292 0.3008 0.00015093 501.777040068694 505.783972776298 33.228 1.1696 33.228 32.735 33.904 0 581 101 8 0 0 0 0.0048471 3 16892 68.224 42.487 1 0.89534 1.0535 0 380050000 198410000 181650000 21505 742 8128 8313 33731;33732;33733 33733 LITEDVQGK 9 1 0 Unmodified _LITEDVQGK_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.7766 2 501.776939 1001.53933 85061.48 0.25279 0.00012684 -0.077782 -3.9029E-05 0.17501 8.7814E-05 501.776884009892 505.783817118325 38.368 1.0618 38.368 37.979 39.04 0 423 83 8 0 0 0 0.013277 2 17264 56.721 38.397 1 0.8932 0.74377 0 47710000 25755000 21955000 21506 742 8128 8313 33734;33735 33735 LITEDVQGK 9 1 0 Unmodified _LITEDVQGK_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.7764 2 501.776939 1001.53933 85005.82 -0.018892 -9.4796E-06 0.10483 5.2603E-05 0.085942 4.3124E-05 501.777003298472 505.783946189228 38.489 1.6111 38.489 38.079 39.69 0 502 124 8 0 0 0 0.03089 2 16866 52.786 29.895 1 0.86465 0.72228 0 43219000 22927000 20292000 21507 742 8128 8313 33736;33737 33737 LITGASDSELR 11 0 1 Unmodified _LITGASDSELR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.3088 2 581.309135 1160.60372 79558.52 0.44765 0.00026022 0.10669 6.2018E-05 0.55433 0.00032224 581.309139240051 586.313330708508 47.15 0.62742 47.15 46.86 47.487 3.8147E-06 258 57 6 0 0 0 1.2643E-05 2 25568 107.79 88.809 1 0.89226 0.99207 0 75004000 46629000 28375000 21508 1827 8129 8314 33738;33739 33739 LITGASDSELR 11 0 1 Unmodified _LITGASDSELR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.3132 2 581.309135 1160.60372 79063.32 0.48226 0.00028034 -0.14546 -8.4559E-05 0.33679 0.00019578 581.308981688802 586.313177237171 46.114 0.52229 46.114 45.847 46.369 0 174 41 6 0 0 0 0.00047209 2 25307 90.15 67.913 1 0.87425 0.99618 0 103160000 54586000 48579000 21509 1827 8129 8314 33740;33741 33740 LITGASDSELR 11 0 1 Unmodified _LITGASDSELR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.3138 2 581.309135 1160.60372 80319.84 0.59137 0.00034377 0.16259 9.4513E-05 0.75396 0.00043828 581.309089458246 586.313263022833 54.316 0.72318 54.316 54.036 54.759 -3.8147E-06 253 54 7 0 0 0 0.0093229 2 27011 52.725 45.245 1 1.2211 1.0064 0 11665000 4914000 6751100 21510 1827 8129 8314 33742;33743 33742 LITGASDSELR 11 0 1 Unmodified _LITGASDSELR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.3138 2 581.309135 1160.60372 78442.3 0.35532 0.00020655 0.7092 0.00041227 1.0645 0.00061881 581.309339593379 586.313514095284 54.802 0.77585 54.802 54.502 55.278 3.8147E-06 259 56 8 0 0 0 0.035614 2 26712 41.54 37.124 1 1.2727 1.0271 0 11321000 4875000 6446400 21511 1827 8129 8314 33744;33745 33744 LITGLGVGR 9 0 1 Unmodified _LITGLGVGR_ 0 0 0 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.2807 2 443.279452 884.544351 90919.76 0.031487 1.3958E-05 0.7675 0.00034022 0.79899 0.00035418 443.279889130096 448.283691573065 63.812 0.97797 63.812 63.377 64.355 0 301 88 5 0 0 0 0.0060191 1 37458 65.252 14.286 1 0.91583 0.99998 0 30023000 16118000 13906000 21512 1997 8130 8315 33746 33746 LITGLGVGR 9 0 1 Unmodified _LITGLGVGR_ 0 0 0 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.2836 2 443.279452 884.544351 91308.6 0.13285 5.889E-05 0.44263 0.00019621 0.57548 0.0002551 443.279871464481 448.283456724765 74.157 0.88147 74.157 73.798 74.679 -7.6294E-06 236 58 6 0 0 0 0.016119 2 39337 54.157 14.054 1 1.1397 0.95304 0 3737800 1801700 1936100 21513 1997 8130 8315 33747;33748 33748 LITGLGVGR 9 0 1 Unmodified _LITGLGVGR_ 0 0 0 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 448.2838 2 443.279452 884.544351 92021.88 0.026161 1.1596E-05 0.65663 0.00029107 0.68279 0.00030267 443.27995418966 448.283505690283 74.465 0.74002 74.465 74.144 74.884 -7.6294E-06 196 46 6 0 0 0 0.017716 2 38699 52.716 14.896 1 1.2017 1.0252 0 3213900 1356700 1857200 21514 1997 8130 8315 33749;33750 33750 LITNSEEIAFYNGNK 15 1 0 Unmodified _LITNSEEIAFYNGNK_ 0 0 0 B4DL07;P28288;B4DZ22 B4DL07 B4DL07 ABCD3 ATP-binding cassette sub-family D member 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.9362 2 856.928134 1711.84172 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.616 1 82.616 82.116 83.116 -7.6294E-06 0 0 0 0.00044827 1 50575 80.979 63.543 1 21515 994 8131 8316 33751 33751 LITNTAEAVLQK 12 1 0 Unmodified _LITNTAEAVLQK_ 0 0 0 A0A024R9G7;Q6PL18 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8834 2 650.877185 1299.73982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.938 1 74.938 74.438 75.438 0 0 0 0 0.00083818 1 45137 75.294 34.307 1 21516 278 8132 8317 33752 33752 LITNTAEAVLQK 12 1 0 Unmodified _LITNTAEAVLQK_ 0 0 0 A0A024R9G7;Q6PL18 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.8842 2 650.877185 1299.73982 77688.41 0.6033 0.00039268 0.41749 0.00027173 1.0208 0.00066441 650.877934517853 654.884262302691 87.257 0.48792 87.257 86.948 87.436 7.6294E-06 81 26 4 0 0 0 0.0047976 1 47146 52.579 24.836 1 1.452 1.1648 0 1955500 1002100 953320 21517 278 8132 8317 33753 33753 LITPAVVSER 10 0 1 Unmodified _LITPAVVSER_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.8262 2 542.821681 1083.62881 81044.45 0.59105 0.00032083 -0.091124 -4.9464E-05 0.49992 0.00027137 542.821632156523 547.825725070371 69.016 1.3405 69.016 68.347 69.688 0 632 116 8 0 0 0 0.00050835 2 39842 85.731 43.443 1 1.1709 1.388 0 534730000 252540000 282190000 21518 1649 8133 8318 33754;33755 33755 LITPAVVSER 10 0 1 Unmodified _LITPAVVSER_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.8262 2 542.821681 1083.62881 80921.08 0.42377 0.00023003 -0.025483 -1.3833E-05 0.39829 0.0002162 542.821642261563 547.825782042128 67.772 1.6612 67.772 66.864 68.526 0 552 137 8 0 0 0 0.0013651 3 39974 73.985 36.257 1 1.1521 1.3409 0 419500000 199010000 220490000 21519 1649 8133 8318 33756;33757;33758 33756 LITPAVVSER 10 0 1 Unmodified _LITPAVVSER_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.822 2 542.821681 1083.62881 NaN NaN NaN -0.42522 -0.00023082 NaN NaN NaN NaN 67.5 0.37427 67.5 67.149 67.523 0 0 0 0 8.46E-05 1 39975 98.033 46.179 1 NaN NaN 0 106690000 106690000 0 21520 1649 8133 8318 33759 33759 LITPAVVSER 10 0 1 Unmodified _LITPAVVSER_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.826 2 542.821681 1083.62881 81285.33 0.56041 0.0003042 -0.16 -8.6854E-05 0.40041 0.00021735 542.821566686585 547.825779503826 78.51 1.2042 78.51 78.129 79.333 0 350 74 8 0 0 0 0.0030553 2 42065 66.27 34.336 1 0.61989 0.52684 0 34169000 20293000 13876000 21521 1649 8133 8318 33760;33761 33761 LITPAVVSER 10 0 1 Unmodified _LITPAVVSER_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.826 2 542.821681 1083.62881 81042.77 0.53255 0.00028908 -0.20861 -0.00011324 0.32394 0.00017584 542.821605648165 547.825788591465 78.71 1.2489 78.71 78.277 79.526 0 400 78 8 0 0 0 0.0037244 2 41422 63.216 28.963 1 0.61094 0.53294 0 25979000 15953000 10026000 21522 1649 8133 8318 33762;33763 33763 LIVDEAINEDNSVVSLSQPK 20 1 0 Unmodified _LIVDEAINEDNSVVSLSQPK_ 0 0 0 V9HW80;P55072 V9HW80 V9HW80 HEL-S-70;VCP Transitional endoplasmic reticulum ATPase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1090.0726 2 1085.56552 2169.11649 NaN NaN NaN 0.096346 0.00010459 NaN NaN NaN NaN 106.03 0.31853 106.03 105.86 106.18 0 0 0 0 0.0013342 1 65684 44.457 33.847 1 NaN NaN 0 7153200 0 7153200 21523 1613 8134 8319 33764 33764 LIVDEAINEDNSVVSLSQPK 20 1 0 Unmodified _LIVDEAINEDNSVVSLSQPK_ 0 0 0 V9HW80;P55072 V9HW80 V9HW80 HEL-S-70;VCP Transitional endoplasmic reticulum ATPase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1090.0759 2 1085.56552 2169.11649 58805.5 0.21455 0.00023291 0.062829 6.8205E-05 0.27738 0.00030112 1086.0665436106 1089.57304200664 105.47 0.36272 105.47 105.27 105.63 7.6294E-06 90 23 7 0 0 0 1.3851E-06 3 66997 74.769 74.769 1 1.1347 1.1395 0 13692000 6758000 6934500 21524 1613 8134 8319 33765;33766;33767 33767 LIVDHNIADYMTAK 14 1 0 Oxidation (M) _LIVDHNIADYM(ox)TAK_ LIVDHNIADYM(1)TAK LIVDHNIADYM(63.89)TAK 0 1 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.2795 3 540.608107 1618.80249 83517.51 0.58066 0.00031391 -0.90891 -0.00049137 -0.32825 -0.00017745 540.941543489368 543.279241192083 61.16 0.48845 61.16 60.876 61.364 0 172 48 5 0 0 0 6.0361E-05 1 35772 63.894 59.949 1 1.505 1.6293 0 22060000 9447500 12612000 21525 1854 8135 8320 33768 33768 1714 LIVENLSSR 9 0 1 Unmodified _LIVENLSSR_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5;B4DEM8;V9HVZ0;A8K588;Q13247;Q59GY3;A0A024R6D8;Q59EK7;Q13243;B4DJK0;B4DUA4 A8K644;V9HVZ0;A0A024R6D8 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6;SFRS5;SRSF5 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.7993 2 515.798206 1029.58186 84889.39 0.52718 0.00027192 -0.31597 -0.00016298 0.2112 0.00010894 515.797824639919 520.802160155889 59.368 1.1104 59.368 58.952 60.062 -3.8147E-06 498 90 9 0 0 0 0.0017082 4 33633 81.89 54.636 1 1.1151 1.3186 0 273270000 124980000 148290000 21526 748;755;202 8136 8321 33769;33770;33771;33772 33770 LIVENLSSR 9 0 1 Unmodified _LIVENLSSR_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5;B4DEM8;V9HVZ0;A8K588;Q13247;Q59GY3;A0A024R6D8;Q59EK7;Q13243;B4DJK0;B4DUA4 A8K644;V9HVZ0;A0A024R6D8 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6;SFRS5;SRSF5 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.8027 2 515.798206 1029.58186 84613.17 0.60693 0.00031305 -0.23935 -0.00012346 0.36757 0.00018959 515.79779069928 520.802263219737 58.358 0.95844 58.358 58.013 58.971 3.8147E-06 361 74 8 0 0 0 0.00018844 3 33818 106.91 49.319 1 1.0327 1.1926 0 248260000 114400000 133860000 21527 748;755;202 8136 8321 33773;33774;33775 33773 LIVENLSSR 9 0 1 Unmodified _LIVENLSSR_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5;B4DEM8;V9HVZ0;A8K588;Q13247;Q59GY3;A0A024R6D8;Q59EK7;Q13243;B4DJK0;B4DUA4 A8K644;V9HVZ0;A0A024R6D8 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6;SFRS5;SRSF5 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.8019 2 515.798206 1029.58186 84677.62 0.32373 0.00016698 -0.38982 -0.00020107 -0.066083 -3.4085E-05 515.797637552072 520.802208673198 68.365 1.2924 68.365 67.942 69.235 0 367 92 7 0 0 0 0.002701 2 35638 73.665 35.531 1 0.63356 0.51802 0 13743000 8029300 5713400 21528 748;755;202 8136 8321 33776;33777 33776 LIVENLSSR 9 0 1 Unmodified _LIVENLSSR_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5;B4DEM8;V9HVZ0;A8K588;Q13247;Q59GY3;A0A024R6D8;Q59EK7;Q13243;B4DJK0;B4DUA4 A8K644;V9HVZ0;A0A024R6D8 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6;SFRS5;SRSF5 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.8024 2 515.798206 1029.58186 NaN NaN NaN -0.043372 -2.2371E-05 NaN NaN NaN NaN 68.762 0.9596 68.762 68.426 69.385 0 0 0 0 0.019539 1 35147 59.245 33.508 1 NaN NaN 0 5155200 0 5155200 21529 748;755;202 8136 8321 33778 33778 LIVNIAK 7 1 0 Unmodified _LIVNIAK_ 0 0 0 Q15058 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 389.767 2 385.760364 769.506175 101285.9 0.045128 1.7409E-05 0.030851 1.1901E-05 0.075979 2.931E-05 385.760417354529 389.767241730566 61.448 0.39287 61.448 61.326 61.719 3.8147E-06 56 31 4 0 0 0 0.040059 1 35193 59.641 27.527 1 2.0081 2.0319 0 5696200 1925400 3770800 21530 1751 8137 8322 33779 33779 LIVNVNDLR 9 0 1 Unmodified _LIVNVNDLR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.3185 2 528.314023 1054.61349 82627.91 0.53916 0.00028484 0.59294 0.00031326 1.1321 0.0005981 528.314238290282 533.318176470122 84.947 0.48889 84.947 84.736 85.225 0 168 39 7 0 0 0 2.5787E-05 2 50935 113.26 54.651 1 1.3277 1.4421 0 50324000 22338000 27985000 21531 568 8138 8323 33780;33781 33780 LIVNVNDLR 9 0 1 Unmodified _LIVNVNDLR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.3182 2 528.314023 1054.61349 82936.97 0.84269 0.00044521 1.0465 0.00055287 1.8892 0.00099807 528.314325647525 533.318342721847 83.902 0.5166 83.902 83.669 84.186 0 216 43 9 0 0 0 0.00028235 2 51429 103.56 55.715 1 1.3186 1.5013 0 109380000 51790000 57592000 21532 568 8138 8323 33782;33783 33782 LIVVLEGASLETVK 14 1 0 Unmodified _LIVVLEGASLETVK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.9502 2 735.942524 1469.8705 73757.67 1.2336 0.00090784 0.018775 1.3818E-05 1.2524 0.00092166 735.942562935002 739.949619731745 111.51 0.67678 111.51 111.28 111.95 -7.6294E-06 114 50 4 0 0 0 0.0027644 1 70194 48.284 48.284 1 1.4093 1.5817 0 67321000 24328000 42993000 21533 759 8139 8324 33784 33784 LIVVLEGASLETVK 14 1 0 Unmodified _LIVVLEGASLETVK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.9498 2 735.942524 1469.8705 74058.89 0.78089 0.00057469 -0.33037 -0.00024313 0.45053 0.00033156 736.443134398835 739.949464386808 111.14 0.7448 111.14 110.71 111.45 -7.6294E-06 137 54 4 0 0 0 3.6418E-06 1 71545 101.93 101.93 1 1.7285 1.7472 0 8674500 2722000 5952500 21534 759 8139 8324 33785 33785 LIVVLEGASLETVK 14 1 0 Unmodified _LIVVLEGASLETVK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.95 2 735.942524 1469.8705 72149.23 0.93607 0.0006889 -0.46815 -0.00034453 0.46793 0.00034437 735.94188642888 739.949421929001 122.88 0.8683 122.88 122.57 123.44 0 152 39 7 0 0 0 0.00022159 1 73296 66.267 66.267 1 1.6354 1.314 0 7852100 3005900 4846200 21535 759 8139 8324 33786 33786 LIVVLEGASLETVK 14 1 0 Unmodified _LIVVLEGASLETVK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.9502 2 735.942524 1469.8705 73056.55 0.98093 0.00072191 -0.62694 -0.00046139 0.354 0.00026052 736.443171923181 739.949421423677 122.67 0.68439 122.67 122.36 123.05 0 151 33 7 0 0 0 5.1441E-05 1 72231 92.866 92.866 1 1.7401 1.4305 0 9863500 3840900 6022600 21536 759 8139 8324 33787 33787 LIYFQLHR 8 0 1 Unmodified _LIYFQLHR_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 363.8787 3 363.87831 1088.6131 100854.5 0.18651 6.7867E-05 0.0063684 2.3173E-06 0.19288 7.0184E-05 363.878321401774 367.214308543747 75.941 0.74176 75.941 75.627 76.369 0 266 62 6 0 0 0 0.0039063 2 44546 58.917 34.023 1 1.5885 1.651 0 22224000 10343000 11882000 21537 862 8140 8325 33788;33789 33788 LIYFQLHR 8 0 1 Unmodified _LIYFQLHR_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.3185 2 545.313826 1088.6131 NaN NaN NaN -2.4009 -0.0013092 NaN NaN NaN NaN 75.987 0.62296 75.987 75.593 76.216 7.6294E-06 0 0 0 0.047389 1 44741 50.966 26.994 1 NaN NaN 0 7689300 0 7689300 21538 862 8140 8325 33790 33790 LIYFQLHR 8 0 1 Unmodified _LIYFQLHR_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 363.8784 3 363.87831 1088.6131 99364.87 0.23286 8.4732E-05 -0.27742 -0.00010095 -0.044563 -1.6215E-05 363.878170596274 367.214209965354 74.122 0.76985 74.122 73.816 74.586 0 277 64 6 0 0 0 0.0031964 2 44473 60.972 36.078 1 1.3991 1.5286 0 30235000 12234000 18001000 21539 862 8140 8325 33791;33792 33791 LKGDDLQAIK 10 2 0 Unmodified _LKGDDLQAIK_ 0 0 1 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;D3DPI2;G3V5V7;B4DQQ2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.8191 2 550.819138 1099.62372 79657.79 0.52185 0.00028745 -0.070309 -3.8728E-05 0.45154 0.00024872 550.819029438223 558.83323316936 35.254 0.40358 35.254 35.038 35.442 0 206 36 8 0 0 0 1.6905E-05 1 17630 110.38 46.816 1 1.1447 1.3508 0 147530000 66870000 80658000 21540 837;781 8141 8326 33793 33793 LKGDDLQAIK 10 2 0 Unmodified _LKGDDLQAIK_ 0 0 1 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;D3DPI2;G3V5V7;B4DQQ2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.8197 2 550.819138 1099.62372 80354.98 0.51713 0.00028484 0.060079 3.3093E-05 0.57721 0.00031794 550.819057667336 558.833215341759 33.896 0.67184 33.896 33.688 34.36 0 254 50 9 0 0 0 6.2398E-05 2 17067 104.05 51.332 1 1.1532 1.341 0 149950000 68503000 81444000 21541 837;781 8141 8326 33794;33795 33795 LKGDDLQAIKK 11 3 0 Unmodified _LKGDDLQAIKK_ 0 0 2 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 410.2469 3 410.246839 1227.71869 93000.3 -0.15471 -6.3468E-05 -0.060518 -2.4827E-05 -0.21522 -8.8295E-05 410.246707792263 418.261091844179 27.347 0.50286 27.347 27.142 27.644 0 107 22 7 0 0 0 0.014948 1 10584 34.185 22.731 1 0.62063 0.58126 0 11384000 6719100 4664700 21542 837;781 8142 8327 33796 33796 LKPESSQQPGQDALAVK 17 2 0 Unmodified _LKPESSQQPGQDALAVK_ 0 0 1 A0A024RBU4;O96006;C9JXP4 A0A024RBU4 A0A024RBU4 hCG_1981838;ZBED1 Zinc finger BED domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.3231 3 599.323135 1794.94758 78219.08 0.54992 0.00032958 -0.18477 -0.00011074 0.36515 0.00021884 599.323314865961 604.665794554162 44.154 0.38172 44.154 43.969 44.351 -3.8147E-06 129 24 7 0 0 0 0.0043136 1 20942 32.191 32.191 1 0.74951 0.64785 0 4278500 2660400 1618100 21543 347 8143 8328 33797 33797 LKPESSQQPGQDALAVK 17 2 0 Unmodified _LKPESSQQPGQDALAVK_ 0 0 1 A0A024RBU4;O96006;C9JXP4 A0A024RBU4 A0A024RBU4 hCG_1981838;ZBED1 Zinc finger BED domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.6579 3 599.323135 1794.94758 78271.98 0.63402 0.00037998 -0.56735 -0.00034002 0.066672 3.9958E-05 599.657218525545 605.000087124286 44.152 0.46889 44.152 43.894 44.363 0 170 30 7 0 0 0 0.029217 2 20392 21.359 21.359 1 0.8943 0.77292 0 2875800 1445700 1430100 21544 347 8143 8328 33798;33799 33798 LKPQYLEELPGQLK 14 2 0 Unmodified _LKPQYLEELPGQLK_ 0 0 1 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3;B4E2J2 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.3281 3 552.650412 1654.92941 94100.57 0.47968 0.0002651 0.66383 0.00036686 1.1435 0.00063196 552.985118647847 558.328178219062 87.63 1.1353 87.63 86.975 88.11 0 281 105 5 0 0 0 0.023255 1 52965 25.376 25.376 1 3.0784 3.6376 0 32657000 9852600 22805000 21545 1503 8144 8329 33800 33800 LKPTDVGLLAVIANNIITINK 21 2 0 Unmodified _LKPTDVGLLAVIANNIITINK_ 0 0 1 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;D6RDY6 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.9529 3 740.782378 2219.3253 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.59 1 133.59 133.09 134.09 0 0 0 0 0.017322 1 87565 34.067 28.909 1 21546 1416 8145 8330 33801 33801 LKPTDVGLLAVIANNIITINK 21 2 0 Unmodified _LKPTDVGLLAVIANNIITINK_ 0 0 1 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;D6RDY6 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.9528 3 740.782378 2219.3253 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.57 1 133.57 133.07 134.07 0 0 0 0 0.024066 1 89786 31.75 27.482 1 21547 1416 8145 8330 33802 33802 LKPWGLFEVLVEK 13 2 0 Unmodified _LKPWGLFEVLVEK_ 0 0 1 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.9725 3 519.972827 1556.89665 85870.12 0.65475 0.00034045 -0.23925 -0.0001244 0.4155 0.00021605 519.972559643111 525.31539792155 132.63 0.22331 132.63 132.54 132.76 0 55 13 6 0 0 0 0.016533 2 86664 23.934 23.934 1 1.4535 1.6101 0 5135800 1638300 3497600 21548 1988 8146 8331 33803;33804 33803 LLAAALK 7 1 0 Unmodified _LLAAALK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;A0A0S2Z5C1;F8WDI9;F8WCR3 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 350.2414 2 350.241807 698.469061 NaN NaN NaN -0.1447 -5.0682E-05 NaN NaN NaN NaN 49.624 0.43335 49.624 49.308 49.742 0 0 0 0 0.044333 1 27893 61.123 15.673 1 NaN NaN 0 6988700 6988700 0 21549 582 8147 8332 33805 33805 LLAAFEER 8 0 1 Unmodified _LLAAFEER_ 0 0 0 Q9HC52;C9J6K3;C9JM54 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.7608 2 474.761092 947.507631 90201.41 -0.014441 -6.856E-06 0.08559 4.0635E-05 0.071149 3.3779E-05 474.760937824567 479.765247736824 65.092 0.92348 65.092 64.825 65.749 0 246 82 5 0 0 0 0.012318 2 37523 75.213 56.43 1 0.90289 0.94251 0 13278000 7033400 6244700 21550 2052 8148 8333 33806;33807 33806 LLAAFEER 8 0 1 Unmodified _LLAAFEER_ 0 0 0 Q9HC52;C9J6K3;C9JM54 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.7608 2 474.761092 947.507631 89037.23 0.078484 3.7261E-05 0.071243 3.3824E-05 0.14973 7.1085E-05 474.761010516197 479.76523758633 63.772 0.9565 63.772 63.411 64.368 -3.8147E-06 240 86 4 0 0 0 0.0085059 1 37538 85.064 66.282 1 0.89059 0.89086 0 17004000 8987600 8016800 21551 2052 8148 8333 33808 33808 LLAAFEER 8 0 1 Unmodified _LLAAFEER_ 0 0 0 Q9HC52;C9J6K3;C9JM54 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 479.7652 2 474.761092 947.507631 88884.83 0.32054 0.00015218 -0.21867 -0.00010382 0.10187 4.8363E-05 474.76077668551 479.765011022445 74.273 0.75209 74.273 73.915 74.667 7.6294E-06 188 49 5 0 0 0 0.034442 1 39338 49.418 31.382 1 1.297 1.0857 0 3938600 1712500 2226100 21552 2052 8148 8333 33809 33809 LLAAFEER 8 0 1 Unmodified _LLAAFEER_ 0 0 0 Q9HC52;C9J6K3;C9JM54 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 479.7652 2 474.761092 947.507631 88564.55 0.23794 0.00011297 -0.11366 -5.3962E-05 0.12428 5.9003E-05 474.760891484104 479.765038978019 74.517 0.73143 74.517 74.256 74.988 0 169 43 6 0 0 0 0.031343 1 38712 51.346 24.744 1 1.2924 1.1217 0 3470600 1613200 1857300 21553 2052 8148 8333 33810 33810 LLACIASR 8 0 1 Unmodified _LLACIASR_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.2617 2 452.257662 902.500772 89937.53 0.2053 9.285E-05 0.06077 2.7484E-05 0.26607 0.00012033 452.257641995426 457.261813873315 49.634 0.63534 49.634 49.427 50.063 0 189 50 7 0 0 0 0.0027401 2 27924 98.997 28.554 1 0.69602 0.8156 0 724310000 410590000 313710000 21554 1635 8149 8334 33811;33812 33811 LLACIASR 8 0 1 Unmodified _LLACIASR_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 457.2615 2 452.257662 902.500772 90085.97 0.19273 8.7166E-05 -0.39907 -0.00018048 -0.20634 -9.3317E-05 452.257636367812 457.261642699552 58.237 0.89568 58.237 57.844 58.739 0 353 67 10 0 0 0 0.031343 2 29526 51.346 9.8693 1 0.87309 0.75315 0 77682000 41071000 36610000 21555 1635 8149 8334 33813;33814 33813 LLACIASR 8 0 1 Unmodified _LLACIASR_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 457.2618 2 452.257662 902.500772 88258.29 -0.027154 -1.2281E-05 -0.36999 -0.00016733 -0.39714 -0.00017961 452.25761873838 457.261644990797 58.553 1.0829 58.553 58.13 59.212 3.8147E-06 393 83 10 0 0 0 0.031343 2 29001 51.346 12.299 1 0.84476 0.73721 0 71717000 38718000 32999000 21556 1635 8149 8334 33815;33816 33815 LLACIASRPGQCGR 14 0 2 Unmodified _LLACIASRPGQCGR_ 0 0 1 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.6039 3 520.269543 1557.7868 82853.02 0.48902 0.00025442 -0.33072 -0.00017206 0.15829 8.2356E-05 520.269440109102 526.942102078146 42.494 0.90078 42.494 42.11 43.011 -3.8147E-06 250 71 7 0 0 0 0.0008242 1 22689 51.211 31.115 1 0.74806 0.81431 0 71060000 41895000 29164000 21557 1635 8150 8335 33817 33817 LLACIASRPGQCGR 14 0 2 Unmodified _LLACIASRPGQCGR_ 0 0 1 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.2699 3 520.269543 1557.7868 NaN NaN NaN -0.21417 -0.00011142 NaN NaN NaN NaN 41.408 0.56516 41.408 41.217 41.782 0 0 0 0 0.0023217 1 22196 66.004 43.126 1 NaN NaN 0 46426000 46426000 0 21558 1635 8150 8335 33818 33818 LLACIASRPGQCGR 14 0 2 Unmodified _LLACIASRPGQCGR_ 0 0 1 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.9421 3 520.269543 1557.7868 79414.8 0.15172 7.8933E-05 0.28595 0.00014877 0.43766 0.0002277 520.269804019491 526.942206686929 48.957 1.1987 48.957 48.663 49.862 0 556 97 12 0 0 0 0.00016856 2 23835 49.31 28.929 1 0.87415 0.70443 0 60899000 31940000 28959000 21559 1635 8150 8335 33819;33820 33820 LLACIASRPGQCGR 14 0 2 Unmodified _LLACIASRPGQCGR_ 0 0 1 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 526.9415 3 520.269543 1557.7868 80755.52 0.01728 8.9901E-06 0.29066 0.00015122 0.30794 0.00016021 520.269913756443 526.942148044075 49.061 1.3721 49.061 48.784 50.156 0 512 106 10 0 0 0 0.0012338 2 23261 40.552 20.456 1 0.91965 0.86428 0 56129000 30687000 25442000 21560 1635 8150 8335 33821;33822 33821 LLADPTGAFGK 11 1 0 Unmodified _LLADPTGAFGK_ 0 0 0 V9HW35;P30044 V9HW35 V9HW35 HEL-S-55;PRDX5 Peroxiredoxin-5, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.3075 2 545.300581 1088.58661 NaN NaN NaN -0.00019786 -1.0789E-07 NaN NaN NaN NaN 77.31 0.43341 77.31 77.002 77.436 0 0 0 0 0.038372 1 45561 47.706 12.35 1 NaN NaN 0 5327400 0 5327400 21561 1529 8151 8336 33823 33823 LLADQAEAR 9 0 1 Unmodified _LLADQAEAR_ 0 0 0 J3QR09;J3KTE4;Q53G49;P84098;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.7682 2 493.766906 985.519259 84783.89 0.17985 8.8806E-05 -0.26802 -0.00013234 -0.08817 -4.3536E-05 493.766855070615 498.77078522492 27.511 0.90685 27.511 27.276 28.183 0 348 60 10 0 0 0 1.1572E-05 3 12619 125.5 56.404 1 0.7085 0.84041 0 644970000 369170000 275790000 21562 1331 8152 8337 33824;33825;33826 33825 LLADQAEAR 9 0 1 Unmodified _LLADQAEAR_ 0 0 0 J3QR09;J3KTE4;Q53G49;P84098;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.7714 2 493.766906 985.519259 84338.45 0.2087 0.00010305 -0.23491 -0.00011599 -0.02621 -1.2942E-05 493.766904393606 498.770857557341 27.113 0.92737 27.113 26.701 27.628 1.9073E-06 250 46 10 0 0 0 1.1998E-11 2 12320 153.78 64.105 1 0.73895 0.86606 0 734570000 421550000 313020000 21563 1331 8152 8337 33827;33828 33827 LLADQAEAR 9 0 1 Unmodified _LLADQAEAR_ 0 0 0 J3QR09;J3KTE4;Q53G49;P84098;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.7711 2 493.766906 985.519259 84567.95 0.1181 5.8314E-05 -0.45228 -0.00022332 -0.33418 -0.00016501 493.766847530103 498.770707838025 30.76 1.2275 30.76 30.458 31.685 0 421 77 10 0 0 0 0.013657 2 12700 56.378 16.175 1 0.91304 0.7914 0 168140000 87389000 80749000 21564 1331 8152 8337 33829;33830 33829 LLADQAEAR 9 0 1 Unmodified _LLADQAEAR_ 0 0 0 J3QR09;J3KTE4;Q53G49;P84098;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.7712 2 493.766906 985.519259 84263.45 -0.001929 -9.5246E-07 -0.12666 -6.2542E-05 -0.12859 -6.3495E-05 493.767000559627 498.770890929987 30.871 1.0576 30.871 30.507 31.565 -1.9073E-06 344 55 10 0 0 0 0.0043049 2 12273 69.598 26.834 1 0.92194 0.80489 0 116440000 62762000 53677000 21565 1331 8152 8337 33831;33832 33831 LLAEGHPDPDAELQR 15 0 1 Unmodified _LLAEGHPDPDAELQR_ 0 0 0 P49756 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.6176 3 554.281159 1659.82165 81208.15 0.62674 0.00034739 -0.10737 -5.9513E-05 0.51937 0.00028788 554.615309046864 557.617086569096 51.171 0.46156 51.171 50.894 51.356 0 198 42 7 0 0 0 0.00010486 2 28257 54.501 49.291 1 1.1093 1.1942 0 47614000 25363000 22251000 21566 1587 8153 8338 33833;33834 33834 LLAEGHPDPDAELQR 15 0 1 Unmodified _LLAEGHPDPDAELQR_ 0 0 0 P49756 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.6152 3 554.281159 1659.82165 82043.65 0.75615 0.00041912 -0.64129 -0.00035545 0.11486 6.3667E-05 554.280590995078 557.617040766258 49.676 0.45141 49.676 49.487 49.939 0 177 36 7 0 0 0 6.7893E-05 3 27995 59.864 59.513 1 1.0697 1.2049 0 46542000 24358000 22184000 21567 1587 8153 8338 33835;33836;33837 33837 LLAEGHPDPDAELQR 15 0 1 Unmodified _LLAEGHPDPDAELQR_ 0 0 0 P49756 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.9514 3 554.281159 1659.82165 81795.28 0.24448 0.00013551 -0.38038 -0.00021083 -0.1359 -7.5325E-05 554.615437846249 557.617142438228 59.14 0.44853 59.14 58.965 59.413 0 130 34 6 0 0 0 0.047653 1 30103 11.279 11.279 1 0.76878 0.66828 0 1918300 1046400 871910 21568 1587 8153 8338 33838 33838 LLAEILR 7 0 1 Unmodified _LLAEILR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.271 2 414.271096 826.527639 94461.51 0.40131 0.00016625 0.15803 6.5465E-05 0.55933 0.00023172 414.271098798344 419.275211962759 85.461 0.88307 85.461 85.159 86.042 0 199 73 4 0 0 0 0.018704 1 51325 95.793 9.2809 1 2.3493 2.5106 0 44825000 13084000 31742000 21569 1207 8154 8339 33839 33839 LLAIQAK 7 1 0 Unmodified _LLAIQAK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 382.7594 2 378.752539 755.490525 NaN NaN NaN 0.24221 9.1739E-05 NaN NaN NaN NaN 45.932 0.86806 45.932 45.578 46.446 0 0 0 0 0.026863 1 24632 91.093 26.531 1 NaN NaN 0 82909000 0 82909000 21570 2103 8155 8340 33840 33840 LLAIQAK 7 1 0 Unmodified _LLAIQAK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 382.7595 2 378.752539 755.490525 NaN NaN NaN 0.050474 1.9117E-05 NaN NaN NaN NaN 45.137 0.98923 45.137 44.716 45.705 -3.8147E-06 0 0 0 0.026863 1 24557 91.093 26.531 1 NaN NaN 0 81014000 0 81014000 21571 2103 8155 8340 33841 33841 LLAIVR 6 0 1 Unmodified _LLAIVR_ 0 0 0 H0YK42;Q59GU6;Q53HL9;Q53GY8;Q13596 H0YK42 H0YK42 SNX1 Sorting nexin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 342.7417 2 342.741974 683.469395 104186.8 -0.18582 -6.369E-05 0.22593 7.7434E-05 0.040101 1.3744E-05 342.742022767405 347.746061247589 62.698 0.82678 62.698 62.451 63.277 3.8147E-06 250 80 4 0 0 0 0.0048216 1 35951 141.66 0 1 1.2281 1.3073 0 43280000 17907000 25373000 21572 1294 8156 8341 33842 33842 LLAIVR 6 0 1 Unmodified _LLAIVR_ 0 0 0 H0YK42;Q59GU6;Q53HL9;Q53GY8;Q13596 H0YK42 H0YK42 SNX1 Sorting nexin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 342.7419 2 342.741974 683.469395 105099.4 0.035508 1.217E-05 -0.012587 -4.3141E-06 0.022921 7.856E-06 342.741880314704 347.746012118782 61.243 0.76324 61.243 60.991 61.754 0 250 72 6 0 0 0 0.034273 1 35781 112.58 0 1 1.2619 1.4615 0 66893000 31239000 35653000 21573 1294 8156 8341 33843 33843 LLALNSLYSPK 11 1 0 Unmodified _LLALNSLYSPK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.8654 2 609.858264 1217.70197 79075.73 0.80516 0.00049104 0.13434 8.193E-05 0.93951 0.00057297 609.858290028258 613.865313119301 98.555 0.96225 98.555 98.231 99.193 0 383 78 7 0 0 0 1.8777E-05 1 60230 105.4 73.462 1 0.65424 0.73782 0 77080000 44306000 32774000 21574 1665 8157 8342 33844 33844 LLALNSLYSPK 11 1 0 Unmodified _LLALNSLYSPK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.8655 2 609.858264 1217.70197 79088.59 0.37989 0.00023168 0.15571 9.496E-05 0.5356 0.00032664 609.858384769391 613.865307128596 97.903 0.83381 97.903 97.458 98.292 0 391 68 8 0 0 0 2.7847E-08 1 61103 120.99 83.261 1 0.62428 0.70428 0 63400000 37493000 25907000 21575 1665 8157 8342 33845 33845 LLALNSLYSPK 11 1 0 Unmodified _LLALNSLYSPK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.8655 2 609.858264 1217.70197 77988.31 0.70849 0.00043208 -0.20805 -0.00012688 0.50045 0.0003052 609.858088132983 613.865102127761 111.45 0.69602 111.45 111.1 111.8 7.6294E-06 167 33 7 0 0 0 3.8072E-05 2 64543 99.815 74.256 1 0.34361 0.27399 0 19908000 14789000 5119100 21576 1665 8157 8342 33846;33847 33846 LLALNSLYSPK 11 1 0 Unmodified _LLALNSLYSPK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.8654 2 609.858264 1217.70197 78753.08 0.55068 0.00033584 -0.22218 -0.0001355 0.3285 0.00020034 609.85807349164 613.865053040623 111.25 0.53896 111.25 110.99 111.53 0 145 25 7 0 0 0 0.00047879 1 63416 75.294 46.895 1 0.31837 0.25525 0 19310000 14212000 5098300 21577 1665 8157 8342 33848 33848 LLALQR 6 0 1 Unmodified _LLALQR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;Q6ZUE0;H7C267;Q674R7 B5MCF9 B5MCF9 PES1;ATG9B Pescadillo homolog;Autophagy-related protein 9B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.2368 2 357.237056 712.459559 100011.9 -0.2037 -7.277E-05 0.096816 3.4586E-05 -0.10689 -3.8184E-05 357.236960646539 362.24112512892 45.679 0.82173 45.679 45.379 46.201 0 249 74 6 0 0 0 0.037498 1 24476 123.07 29.475 1 0.83398 0.95352 0 126720000 65657000 61066000 21578 886 8158 8343 33849 33849 LLALQR 6 0 1 Unmodified _LLALQR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;Q6ZUE0;H7C267;Q674R7 B5MCF9 B5MCF9 PES1;ATG9B Pescadillo homolog;Autophagy-related protein 9B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 357.237 2 357.237056 712.459559 101453.5 0.27941 9.9814E-05 -0.042064 -1.5027E-05 0.23734 8.4787E-05 357.236916844107 362.241068599467 44.994 0.89094 44.994 44.589 45.48 0 308 72 6 0 0 0 0.037498 1 24449 123.07 29.475 1 0.93624 1.0676 0 138880000 71866000 67012000 21579 886 8158 8343 33850 33850 LLANQQVFHISCFR 14 0 1 Unmodified _LLANQQVFHISCFR_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.6404 3 578.303241 1731.88789 79223.52 0.7555 0.00043691 -0.053335 -3.0844E-05 0.70216 0.00040606 578.637443712482 581.639232216319 91.523 0.99085 91.523 91 91.99 0 336 81 6 0 0 0 1.7503E-05 2 55308 92.039 92.039 1 1.9648 2.1708 0 56548000 20396000 36151000 21580 1010 8159 8344 33851;33852 33851 LLANQQVFHISCFR 14 0 1 Unmodified _LLANQQVFHISCFR_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.9735 3 578.303241 1731.88789 78819.09 1.0358 0.00059902 -0.081268 -4.6997E-05 0.95456 0.00055203 578.303136773653 581.639231978289 90.324 0.85596 90.324 89.923 90.779 0 400 73 7 0 0 0 4.8164E-05 3 55704 75.669 75.669 1 2.2566 2.6033 0 71558000 24216000 47342000 21581 1010 8159 8344 33853;33854;33855 33854 LLANQQVFHISCFR 14 0 1 Unmodified _LLANQQVFHISCFR_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.9753 3 578.303241 1731.88789 NaN NaN NaN 2.1218 0.001227 NaN NaN NaN NaN 90.819 0.064255 90.819 90.763 90.827 0 0 0 0 0.04129 1 56191 28.351 17.717 1 NaN NaN 0 2675800 0 2675800 21582 1010 8159 8344 33856 33856 LLANQQVFHISCFR 14 0 1 Unmodified _LLANQQVFHISCFR_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.9746 3 578.303241 1731.88789 NaN NaN NaN 0.15983 9.2428E-05 NaN NaN NaN NaN 104.01 0.98226 104.01 103.57 104.55 -7.6294E-06 0 0 0 0.00084367 2 58229 64.394 52.478 1 NaN NaN 0 10775000 0 10775000 21583 1010 8159 8344 33857;33858 33857 LLAPDCEIIQEVGK 14 1 0 Unmodified _LLAPDCEIIQEVGK_ 0 0 0 Q9NQT5 Q9NQT5 Q9NQT5 EXOSC3 Exosome complex component RRP40 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.9187 2 792.918723 1583.82289 67445.91 0.76852 0.00060938 -0.28535 -0.00022626 0.48318 0.00038312 792.918500461617 796.926348013179 101.45 0.65432 101.45 101.13 101.79 0 203 49 6 0 0 0 4.1068E-06 2 62299 100.55 66.668 1 0.95044 0.9381 0 19412000 10755000 8656900 21584 2061 8160 8345 33859;33860 33860 LLAPDCEIIQEVGK 14 1 0 Unmodified _LLAPDCEIIQEVGK_ 0 0 0 Q9NQT5 Q9NQT5 Q9NQT5 EXOSC3 Exosome complex component RRP40 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.9206 2 792.918723 1583.82289 68158.95 0.67405 0.00053447 -0.099392 -7.881E-05 0.57466 0.00045566 793.420308985707 796.926488309696 100.75 0.60345 100.75 100.52 101.12 0 219 47 6 0 0 0 6.5956E-05 2 63273 90.653 58.645 1 0.81818 0.83104 0 16725000 9622800 7101700 21585 2061 8160 8345 33861;33862 33861 LLAPDCEIIQEVGK 14 1 0 Unmodified _LLAPDCEIIQEVGK_ 0 0 0 Q9NQT5 Q9NQT5 Q9NQT5 EXOSC3 Exosome complex component RRP40 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.4211 2 792.918723 1583.82289 67409.61 1.1237 0.00089097 -1.1789 -0.00093479 -0.055263 -4.3819E-05 793.420098179695 796.925880545311 113.84 0.65981 113.84 113.46 114.12 0 155 29 8 0 0 0 0.00021373 2 66388 67.385 44.009 1 0.98581 0.77833 0 10710000 5924500 4785200 21586 2061 8160 8345 33863;33864 33864 LLAPDCEIIQEVGK 14 1 0 Unmodified _LLAPDCEIIQEVGK_ 0 0 0 Q9NQT5 Q9NQT5 Q9NQT5 EXOSC3 Exosome complex component RRP40 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.9189 2 792.918723 1583.82289 67078.3 0.78246 0.00062042 -1.1656 -0.00092422 -0.38313 -0.00030379 792.918612792277 796.925939521019 113.69 0.67913 113.69 113.37 114.05 -7.6294E-06 172 31 8 0 0 0 0.00019921 3 65373 69.451 46.533 1 1.0035 0.81851 0 7805900 4125300 3680700 21587 2061 8160 8345 33865;33866;33867 33866 LLASANLEEVTMK 13 1 0 Oxidation (M) _LLASANLEEVTM(ox)K_ LLASANLEEVTM(1)K LLASANLEEVTM(69.72)K 0 1 0 B4DNW3;H0Y993;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.3806 2 717.879067 1433.74358 69089.61 0.64414 0.00046241 -0.80153 -0.0005754 -0.1574 -0.00011299 717.87864135415 721.8859124313 78.225 0.54615 78.225 77.861 78.407 -7.6294E-06 245 44 9 0 0 0 0.00010467 1 46226 69.721 69.721 1 0.9393 1.0846 0 221570000 113270000 108290000 21588 1546;1018 8161 8346 33868 33868 805 LLASANLEEVTMK 13 1 0 Oxidation (M) _LLASANLEEVTM(ox)K_ LLASANLEEVTM(1)K LLASANLEEVTM(127.7)K 0 1 0 B4DNW3;H0Y993;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.8871 2 717.879067 1433.74358 69495.01 0.5786 0.00041537 -0.38403 -0.00027568 0.19458 0.00013968 717.8789199236 721.886063766015 77.257 0.64844 77.257 76.783 77.432 0 282 53 8 0 0 0 1.1627E-13 2 46593 127.7 127.7 1 0.93419 1.0906 0 271520000 138830000 132690000 21589 1546;1018 8161 8346 33869;33870 33869 805 LLASANLEEVTMK 13 1 0 Oxidation (M) _LLASANLEEVTM(ox)K_ LLASANLEEVTM(1)K LLASANLEEVTM(101.45)K 0 1 0 B4DNW3;H0Y993;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.8787 2 717.879067 1433.74358 70520.55 0.6869 0.00049311 -0.42574 -0.00030563 0.26116 0.00018748 717.878965404951 721.886032836953 89.671 0.61586 89.671 89.249 89.865 0 227 39 9 0 0 0 4.3164E-06 2 49532 101.45 101.45 1 0.57688 0.47557 0 41397000 27245000 14153000 21590 1546;1018 8161 8346 33871;33872 33872 805 LLASANLEEVTMK 13 1 0 Oxidation (M) _LLASANLEEVTM(ox)K_ LLASANLEEVTM(1)K LLASANLEEVTM(80.74)K 0 1 0 B4DNW3;H0Y993;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK Protein DEK MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.887 2 717.879067 1433.74358 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.19 1 103.19 102.69 103.69 -7.6294E-06 0 0 0 0.00035016 1 58636 80.737 60.408 1 21591 1546;1018 8161 8346 33873 33873 805 LLASANLEEVTMK 13 1 0 Oxidation (M) _LLASANLEEVTM(ox)K_ LLASANLEEVTM(1)K LLASANLEEVTM(61.34)K 0 1 0 B4DNW3;H0Y993;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.3796 2 717.879067 1433.74358 71032.05 0.44457 0.00031915 0.0032609 2.3409E-06 0.44783 0.00032149 717.879200385651 721.886281724206 89.646 0.55225 89.646 89.275 89.827 0 209 35 9 0 0 0 0.00027853 1 48632 61.344 61.344 1 0.56833 0.47253 0 38135000 25025000 13110000 21592 1546;1018 8161 8346 33874 33874 805 LLASANLEEVTMK 13 1 0 Oxidation (M) _LLASANLEEVTM(ox)K_ LLASANLEEVTM(1)K LLASANLEEVTM(63.41)K 0 1 0 B4DNW3;H0Y993;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.8788 2 717.879067 1433.74358 71588.52 0.48441 0.00034775 0.47018 0.00033754 0.95459 0.00068528 717.8789575121 721.886348041193 103.06 0.8418 103.06 102.76 103.6 7.6294E-06 276 57 7 0 0 0 0.00016762 2 57809 63.408 63.408 1 0.9937 0.81222 0 5570800 2784500 2786300 21593 1546;1018 8161 8346 33875;33876 33876 805 LLASANLEEVTMK 13 1 0 Unmodified _LLASANLEEVTMK_ 0 0 0 B4DNW3;H0Y993;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.8833 2 709.88161 1417.74867 77787.94 0.70896 0.00050327 0.18233 0.00012943 0.89128 0.00063271 710.382951706833 714.390141776698 89.964 0.34404 89.964 89.796 90.14 0 63 26 4 0 0 0 0.00030291 2 54258 65.5 47.636 1 0.82604 0.84972 0 12914000 8779400 4135100 21594 1546;1018 8161 8347 33877;33878 33878 LLASDLQR 8 0 1 Unmodified _LLASDLQR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2662 2 458.266542 914.51853 89812.13 0.13393 6.1376E-05 0.046362 2.1246E-05 0.18029 8.2622E-05 458.266524737118 463.270604263484 43.219 0.91 43.219 42.876 43.786 0 356 74 8 0 0 0 0.0023293 2 22977 100.75 26.316 1 0.98392 1.1544 0 219350000 115980000 103370000 21595 1789 8162 8348 33879;33880 33880 LLASDLQR 8 0 1 Unmodified _LLASDLQR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.2666 2 458.266542 914.51853 87229.42 0.45511 0.00020856 -0.39926 -0.00018297 0.055854 2.5596E-05 458.266376356139 463.270512021315 42.635 1.1512 42.635 42.049 43.2 3.8147E-06 421 96 6 0 0 0 0.0021178 2 22963 102.71 29.675 1 1.1336 1.3082 0 240630000 118310000 122320000 21596 1789 8162 8348 33881;33882 33882 LLASDLQR 8 0 1 Unmodified _LLASDLQR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 458.2666 2 458.266542 914.51853 88713.14 0.17468 8.0048E-05 -0.34576 -0.00015845 -0.17108 -7.8402E-05 458.266380169954 463.270491749903 49.585 1.4452 49.585 49.021 50.466 0 578 122 8 0 0 0 0.0088018 1 24159 77.058 16.27 1 1.4594 1.222 0 24849000 10156000 14693000 21597 1789 8162 8348 33883 33883 LLASDLQR 8 0 1 Unmodified _LLASDLQR_ 0 0 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 458.7682 2 458.266542 914.51853 88662.26 -0.20627 -9.4526E-05 -0.004405 -2.0187E-06 -0.21067 -9.6545E-05 458.266506862364 463.270676336869 49.811 1.6687 49.811 49.061 50.73 0 604 135 8 0 0 0 0.052409 1 23719 42.869 10.914 1 1.4534 1.2524 0 22262000 8687100 13575000 21598 1789 8162 8348 33884 33884 LLASFFDR 8 0 1 Unmodified _LLASFFDR_ 0 0 0 A0A024R7E0;Q96RE7 A0A024R7E0 A0A024R7E0 BTBD14B;NACC1 Nucleus accumbens-associated protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.7682 2 484.763635 967.512717 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.973 1 95.973 95.473 96.473 0 0 0 0 0.03446 1 58435 60.76 7.2056 1 21599 221 8163 8349 33885 33885 LLASINSTVR 10 0 1 Unmodified _LLASINSTVR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.3194 2 537.319306 1072.62406 82989.77 0.71809 0.00038584 0.0019556 1.0508E-06 0.72004 0.00038689 537.319288006756 542.323331466939 60.598 0.55986 60.598 60.367 60.926 0 274 49 8 0 0 0 3.4608E-22 2 34513 164.57 164.57 1 0.72575 0.83467 0 144240000 86109000 58133000 21600 1770 8164 8350 33886;33887 33886 LLASINSTVR 10 0 1 Unmodified _LLASINSTVR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.3195 2 537.319306 1072.62406 82848.94 0.54684 0.00029383 -0.0283 -1.5206E-05 0.51853 0.00027862 537.319233443257 542.323313386381 59.32 0.59521 59.32 59.106 59.702 0 259 54 9 0 0 0 1.1107E-22 3 34457 172.21 119.5 1 0.73617 0.84316 0 169000000 99927000 69073000 21601 1770 8164 8350 33888;33889;33890 33889 LLASINSTVR 10 0 1 Unmodified _LLASINSTVR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.3234 2 537.319306 1072.62406 83428.81 0.31984 0.00017186 0.13863 7.4487E-05 0.45847 0.00024634 537.319321846796 542.323422222298 70.164 0.4978 70.164 69.952 70.45 0 210 38 8 0 0 0 0.0037314 2 36741 63.184 23.183 1 1.2215 1.035 0 31897000 14932000 16965000 21602 1770 8164 8350 33891;33892 33892 LLASINSTVR 10 0 1 Unmodified _LLASINSTVR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.3236 2 537.319306 1072.62406 83091.32 0.24784 0.00013317 0.46982 0.00025244 0.71766 0.00038561 537.319484713487 542.32363594688 70.579 0.51997 70.579 70.378 70.898 0 222 44 8 0 0 0 0.0017287 2 36238 72.325 20.471 1 1.18 1.0293 0 34050000 15890000 18159000 21603 1770 8164 8350 33893;33894 33894 LLASLVK 7 1 0 Unmodified _LLASLVK_ 0 0 0 B2R8R5;Q13263;M0R3C0 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 376.262 2 372.254914 742.495276 99727.73 -0.081337 -3.0278E-05 0.29497 0.0001098 0.21363 7.9525E-05 372.254750792266 376.262139965441 64.723 0.86241 64.723 64.242 65.105 0 216 76 4 0 0 0 0.032276 1 37123 65.803 14.837 1 1.3814 1.4114 0 17789000 5550100 12239000 21604 862 8165 8351 33895 33895 LLASLVK 7 1 0 Unmodified _LLASLVK_ 0 0 0 B2R8R5;Q13263;M0R3C0 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 372.2547 2 372.254914 742.495276 99428.04 0.037334 1.3898E-05 0.15522 5.778E-05 0.19255 7.1678E-05 372.254784564198 376.262028110536 63.142 0.72099 63.142 62.776 63.497 0 205 60 5 0 0 0 0.026944 2 37081 83.377 21.038 1 1.5624 1.6507 0 20086000 7650100 12436000 21605 862 8165 8351 33896;33897 33897 LLASPSSR 8 0 1 Unmodified _LLASPSSR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.74 2 415.74016 829.465767 90856.11 0.10232 4.254E-05 -0.22322 -9.2803E-05 -0.1209 -5.0263E-05 415.739830884424 420.744171761908 25.231 0.4395 25.231 25.029 25.469 0 90 20 7 0 0 0 0.0087497 2 10846 77.282 12.479 1 0.94786 1.0012 0 40442000 19655000 20788000 21606 740 8166 8352 33898;33899 33898 LLASPSSR 8 0 1 Unmodified _LLASPSSR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.7399 2 415.74016 829.465767 92287.09 0.15091 6.2737E-05 -0.46644 -0.00019392 -0.31553 -0.00013118 415.739964785163 420.744129254483 25 0.5961 25 24.655 25.251 -1.9073E-06 83 24 7 0 0 0 0.0044591 2 10641 93.561 36.867 1 0.97463 1.1176 0 51617000 24607000 27010000 21607 740 8166 8352 33900;33901 33900 LLASPSSR 8 0 1 Unmodified _LLASPSSR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 415.7399 2 415.74016 829.465767 92506.45 -0.25426 -0.00010571 0.12019 4.9968E-05 -0.13407 -5.5738E-05 415.739933945432 420.744286728582 27.512 0.68535 27.512 27.1 27.785 0 104 29 7 0 0 0 0.042651 2 10678 46.426 7.6341 1 1.6864 1.4512 0 7120900 2756300 4364600 21608 740 8166 8352 33902;33903 33902 LLASPSSR 8 0 1 Unmodified _LLASPSSR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 415.7399 2 415.74016 829.465767 91286.59 -0.63536 -0.00026415 0.073488 3.0552E-05 -0.56187 -0.00023359 415.740183299816 420.744338037144 27.487 0.84339 27.487 27.22 28.064 0 120 36 6 0 0 0 0.010479 2 10187 72.138 18.584 1 1.7174 1.4268 0 5926900 2211200 3715700 21609 740 8166 8352 33904;33905 33905 LLASQGSQGAPLLSTPK 17 1 0 Unmodified _LLASQGSQGAPLLSTPK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.972 2 834.469969 1666.92539 67251.93 0.79529 0.00066364 -0.1168 -9.7467E-05 0.67849 0.00056618 834.469756805095 838.477023876064 80.496 0.57767 80.496 80.22 80.797 0 293 49 8 0 0 0 1.7614E-25 2 47802 146.79 138.69 1 0.90548 0.98898 0 50829000 25730000 25098000 21610 1745 8167 8353 33906;33907 33907 LLASQGSQGAPLLSTPK 17 1 0 Unmodified _LLASQGSQGAPLLSTPK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.47 2 834.469969 1666.92539 67549.01 0.963 0.0008036 -0.32957 -0.00027501 0.63344 0.00052858 834.469516502884 838.476817914184 79.466 0.53109 79.466 79.209 79.74 0 265 43 8 0 0 0 8.0952E-18 2 48227 126.09 111.67 1 0.88371 0.9956 0 68768000 34699000 34068000 21611 1745 8167 8353 33908;33909 33909 LLASQGSQGAPLLSTPK 17 1 0 Unmodified _LLASQGSQGAPLLSTPK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.4705 2 834.469969 1666.92539 66380.54 0.51666 0.00043114 0.011106 9.2675E-06 0.52777 0.00044041 834.97142942702 838.477153111698 92.017 0.91822 92.017 91.754 92.673 0 299 51 9 0 0 0 2.7226E-07 2 51213 97.631 83.211 1 1.6038 1.2949 0 22713000 9017400 13696000 21612 1745 8167 8353 33910;33911 33911 LLASQGSQGAPLLSTPK 17 1 0 Unmodified _LLASQGSQGAPLLSTPK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.4781 2 834.469969 1666.92539 66107.2 0.51516 0.00042989 -0.011567 -9.6521E-06 0.50359 0.00042023 834.971479426985 838.477127819138 91.802 0.80762 91.802 91.531 92.339 0 319 46 10 0 0 0 4.5201E-06 2 50119 86.803 86.803 1 1.612 1.2921 0 19545000 7231700 12313000 21613 1745 8167 8353 33912;33913 33912 LLASSPALPSSGAQAR 16 0 1 Unmodified _LLASSPALPSSGAQAR_ 0 0 0 A0A024R4V8;B4DZT6;Q9NYZ3 A0A024R4V8 A0A024R4V8 GTSE1 G2 and S phase-expressed protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.4203 2 763.420279 1524.82601 72121.52 0.59144 0.00045152 0.46489 0.00035491 1.0563 0.00080643 763.420047615072 768.424804150588 64.675 0.34418 64.675 64.511 64.855 0 110 30 5 0 0 0 0.00015265 3 38049 66.262 23.115 1 0.81265 0.80805 0 8377100 4206700 4170500 21614 163 8168 8354 33914;33915;33916 33915 LLASTLVHSVK 11 1 0 Unmodified _LLASTLVHSVK_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 392.5817 3 389.908046 1166.70231 97061.01 0.22536 8.7869E-05 0.12551 4.8939E-05 0.35087 0.00013681 389.908044732447 392.579363759987 64.191 0.91896 64.191 63.759 64.678 0 327 83 6 0 0 0 0.0098125 2 36837 37.94 37.94 1 1.0205 1.1003 0 34132000 17558000 16574000 21615 2083 8169 8355 33917;33918 33918 LLASTLVHSVK 11 1 0 Unmodified _LLASTLVHSVK_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 392.5793 3 389.908046 1166.70231 98110.94 0.12811 4.995E-05 -0.2293 -8.9404E-05 -0.10119 -3.9454E-05 389.907842542963 392.579378412588 60.407 0.39174 60.407 60.256 60.648 3.8147E-06 78 23 5 0 0 0 0.00094401 2 35284 60.49 60.49 1 0.97946 0.98555 0 27604000 13269000 14335000 21616 2083 8169 8355 33919;33920 33920 LLASTLVHSVK 11 1 0 Unmodified _LLASTLVHSVK_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.9079 3 389.908046 1166.70231 NaN NaN NaN -0.61905 -0.00024137 NaN NaN NaN NaN 61.193 0.44482 61.193 61.149 61.594 0 0 0 0 0.014227 1 35945 45.077 29.69 1 NaN NaN 0 8198700 8198700 0 21617 2083 8169 8355 33921 33921 LLATASFTK 9 1 0 Unmodified _LLATASFTK_ 0 0 0 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.2861 2 476.279118 950.543683 88744.25 0.11015 5.2464E-05 0.04155 1.979E-05 0.1517 7.2253E-05 476.278943150153 480.286161289026 59.26 0.81619 59.26 58.687 59.504 0 289 64 7 0 0 0 0.0054512 2 33659 66.692 35.402 1 1.1499 1.2453 0 43630000 18459000 25171000 21618 1945 8170 8356 33922;33923 33922 LLATASFTK 9 1 0 Unmodified _LLATASFTK_ 0 0 0 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.2862 2 476.279118 950.543683 87601.98 0.14899 7.0959E-05 0.0031257 1.4887E-06 0.15211 7.2448E-05 476.278863211947 480.286176852716 68.29 1.0977 68.29 67.864 68.961 0 308 80 6 0 0 0 0.0019814 2 35603 78.334 29.831 1 1.8731 1.4641 0 11859000 4132900 7726000 21619 1945 8170 8356 33924;33925 33924 LLATASFTK 9 1 0 Unmodified _LLATASFTK_ 0 0 0 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.2862 2 476.279118 950.543683 89027.41 0.24479 0.00011659 -0.080415 -3.83E-05 0.16438 7.8289E-05 476.278805701286 480.286123589565 68.661 0.98268 68.661 68.216 69.199 0 281 68 6 0 0 0 0.019545 2 35017 51.066 14.881 1 1.9417 1.5921 0 8834500 3069000 5765500 21620 1945 8170 8356 33926;33927 33926 LLATGSQDR 9 0 1 Unmodified _LLATGSQDR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.759 2 480.759081 959.503609 87700.54 0.17908 8.6094E-05 0.27236 0.00013094 0.45144 0.00021703 480.75911327477 485.763427800132 22.227 0.53193 22.227 22.098 22.63 0 136 32 8 0 0 0 0.00028235 2 8347 103.56 46.42 1 0.89901 0.99434 0 59314000 29757000 29557000 21621 1698;436 8171 8357 33928;33929 33928 LLATGSQDR 9 0 1 Unmodified _LLATGSQDR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.7591 2 480.759081 959.503609 87012.76 0.13405 6.4444E-05 0.15742 7.568E-05 0.29146 0.00014012 480.759017598843 485.763458380426 23.939 0.35926 23.939 23.762 24.121 0 97 20 6 0 0 0 0.0089883 1 8233 60.59 14.872 1 1.1451 0.96569 0 4723300 2061500 2661900 21622 1698;436 8171 8357 33930 33930 LLATLR 6 0 1 Unmodified _LLATLR_ 0 0 0 Q8WWQ0;Q6RI45 Q8WWQ0;Q6RI45 Q8WWQ0 PHIP;BRWD3 PH-interacting protein;Bromodomain and WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 343.7317 2 343.731606 685.44866 102782.5 0.025377 8.7229E-06 0.041569 1.4289E-05 0.066946 2.3012E-05 343.731487437549 348.73562128522 47.728 0.41675 47.728 47.374 47.791 0 139 35 6 0 0 0 0.031538 1 25876 128 0 1 0.91466 1.0176 0 77228000 38626000 38601000 21623 1942;1860 8172 8358 33931 33931 LLATLR 6 0 1 Unmodified _LLATLR_ 0 0 0 Q8WWQ0;Q6RI45 Q8WWQ0;Q6RI45 Q8WWQ0 PHIP;BRWD3 PH-interacting protein;Bromodomain and WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 343.731 2 343.731606 685.44866 102675 0.14744 5.0681E-05 0.057874 1.9893E-05 0.20532 7.0574E-05 343.731506317171 348.735687593504 46.839 1.1213 46.839 46.395 47.517 0 330 90 6 0 0 0 0.031538 1 25771 128 0 1 0.79302 0.90634 0 89418000 51865000 37553000 21624 1942;1860 8172 8358 33932 33932 LLAVSLLDCTVK 12 1 0 Unmodified _LLAVSLLDCTVK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.3901 2 666.383788 1330.75302 75158.66 0.90402 0.00060242 0.05908 3.937E-05 0.9631 0.00064179 666.384212465327 670.390876153963 112.82 0.65434 112.82 112.59 113.24 0 207 47 6 0 0 0 0.00023548 1 71317 85.958 67.213 1 0.93591 0.96201 0 17483000 8593700 8889600 21625 1827 8173 8359 33933 33933 LLAVSLLDCTVK 12 1 0 Unmodified _LLAVSLLDCTVK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.3893 2 666.383788 1330.75302 74714.26 0.86694 0.00057771 -0.30703 -0.0002046 0.55991 0.00037312 666.384093056626 670.390664701145 112.17 0.70267 112.17 111.95 112.65 -7.6294E-06 240 52 7 0 0 0 0.00022091 1 72521 83 60.941 1 0.82764 0.88156 0 20781000 12272000 8509100 21626 1827 8173 8359 33934 33934 LLAVSLLDCTVK 12 1 0 Unmodified _LLAVSLLDCTVK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 670.8921 2 666.383788 1330.75302 73761.96 0.76261 0.00050819 -0.2964 -0.00019751 0.46621 0.00031067 666.38351176586 670.390796331636 124.25 0.48868 124.25 123.92 124.41 0 129 19 9 0 0 0 0.00029759 2 74261 73.067 60.451 1 1.395 1.0807 0 13324000 6279200 7044500 21627 1827 8173 8359 33935;33936 33935 LLAVSLLDCTVK 12 1 0 Unmodified _LLAVSLLDCTVK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.3894 2 666.383788 1330.75302 74746.76 0.71617 0.00047725 -0.015933 -1.0617E-05 0.70024 0.00046663 666.383752300641 670.390927433562 123.92 0.48865 123.92 123.71 124.2 7.6294E-06 113 18 9 0 0 0 0.00021532 2 73212 81.865 63.597 1 1.4467 1.1645 0 22771000 9722800 13048000 21628 1827 8173 8359 33937;33938 33937 LLDAESEDRPK 11 1 1 Unmodified _LLDAESEDRPK_ 0 0 1 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.836 2 636.825149 1271.63574 74795.95 0.33019 0.00021028 0.064265 4.0925E-05 0.39446 0.0002512 636.825032089485 645.836299808426 24.861 0.54608 24.861 24.668 25.214 0 136 27 8 0 0 0 3.8898E-12 2 10491 147.4 147.4 1 0.8248 0.99376 0 112080000 61945000 50131000 21629 1803 8174 8360 33939;33940 33939 LLDAESEDRPK 11 1 1 Unmodified _LLDAESEDRPK_ 0 0 1 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 424.8855 3 424.885858 1271.63574 91106.97 -0.28877 -0.00012269 -0.050162 -2.1313E-05 -0.33893 -0.00014401 424.885770442193 430.893304496942 24.857 0.52724 24.857 24.708 25.236 0 176 26 12 0 0 0 4.0587E-06 2 10505 108.9 108.9 1 0.80057 0.9666 0 155390000 86605000 68786000 21630 1803 8174 8360 33941;33942 33941 LLDAESEDRPK 11 1 1 Unmodified _LLDAESEDRPK_ 0 0 1 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.2204 3 424.885858 1271.63574 91046.95 0.0078336 3.3284E-06 -0.041176 -1.7495E-05 -0.033342 -1.4167E-05 424.885828887494 430.893335474223 24.593 0.6083 24.593 24.403 25.012 0 164 28 9 0 0 0 0.00016859 2 10236 86.014 86.014 1 0.90018 1.0648 0 180690000 94282000 86407000 21631 1803 8174 8360 33943;33944 33944 LLDAESEDRPK 11 1 1 Unmodified _LLDAESEDRPK_ 0 0 1 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8255 2 636.825149 1271.63574 74865.3 0.65117 0.00041468 -0.040899 -2.6045E-05 0.61028 0.00038864 636.824994188621 645.836246043186 24.594 0.54141 24.594 24.422 24.963 0 156 25 9 0 0 0 7.6153E-16 1 10240 150.85 139.7 1 0.94356 1.1137 0 129020000 65423000 63596000 21632 1803 8174 8360 33945 33945 LLDAESEDRPK 11 1 1 Unmodified _LLDAESEDRPK_ 0 0 1 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.8257 2 636.825149 1271.63574 75350.24 0.57806 0.00036812 -0.22042 -0.00014037 0.35764 0.00022775 636.825073619347 645.83630341824 27.644 0.58134 27.644 27.45 28.032 0 156 22 10 0 0 0 3.5677E-07 2 10817 114.86 114.86 1 1.4147 1.2239 0 14837000 6277500 8559200 21633 1803 8174 8360 33946;33947 33947 LLDAESEDRPK 11 1 1 Unmodified _LLDAESEDRPK_ 0 0 1 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 424.8858 3 424.885858 1271.63574 90783.9 -0.22672 -9.6329E-05 0.12662 5.3799E-05 -0.1001 -4.253E-05 424.885930974044 430.893347659284 27.663 0.69768 27.663 27.45 28.148 0 127 28 9 0 0 0 0.0074244 2 10805 43.897 36.01 1 1.412 1.236 0 26743000 10996000 15746000 21634 1803 8174 8360 33948;33949 33949 LLDAESEDRPK 11 1 1 Unmodified _LLDAESEDRPK_ 0 0 1 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 430.8932 3 424.885858 1271.63574 90985.43 -0.6599 -0.00028038 0.29254 0.00012429 -0.36736 -0.00015609 424.886019103049 430.89341508509 27.749 0.58136 27.749 27.549 28.13 -1.9073E-06 144 25 9 0 0 0 0.0037745 2 10328 57.164 47.842 1 1.3602 1.1531 0 16925000 6644900 10280000 21635 1803 8174 8360 33950;33951 33950 LLDAESEDRPK 11 1 1 Unmodified _LLDAESEDRPK_ 0 0 1 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8251 2 636.825149 1271.63574 74853.8 0.27954 0.00017802 -0.29486 -0.00018778 -0.015319 -9.7558E-06 636.824895677349 645.83616878142 27.77 0.65034 27.77 27.48 28.13 0 161 28 9 0 0 0 3.6897E-07 2 10355 114.5 114.5 1 1.4125 1.1948 0 10869000 4433300 6435900 21636 1803 8174 8360 33952;33953 33953 LLDAPGIVPGPNSEVGTILR 20 0 1 Unmodified _LLDAPGIVPGPNSEVGTILR_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1009.5696 2 1009.56767 2017.12079 61983.5 0.53461 0.00053972 0.45395 0.0004583 0.98856 0.00099802 1010.06920775763 1014.5720660378 118.8 0.3613 118.8 118.63 119 -7.6294E-06 110 20 7 0 0 0 0.0026869 2 76248 32.734 32.734 1 0.97713 1.0143 0 13622000 6842900 6778600 21637 291 8175 8361 33954;33955 33955 LLDAPGIVPGPNSEVGTILR 20 0 1 Unmodified _LLDAPGIVPGPNSEVGTILR_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1010.1068 2 1009.56767 2017.12079 61822.28 0.33632 0.00033954 0.33748 0.00034071 0.6738 0.00068025 1010.06942154422 1014.57213771151 131.08 0.49957 131.08 130.84 131.34 0 126 21 9 0 0 0 0.037669 1 79477 31.827 31.827 1 0.74518 0.6371 0 8748600 4614100 4134500 21638 291 8175 8361 33956 33956 LLDAQLATGGIVDPR 15 0 1 Unmodified _LLDAQLATGGIVDPR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.9311 2 769.93048 1537.84641 70102.18 0.62096 0.00047809 -0.078884 -6.0735E-05 0.54207 0.00041736 769.930228482035 774.934451319521 99.6 0.82495 99.6 99.193 100.02 0 392 68 8 0 0 0 2.2747E-10 2 60883 119.39 119.39 1 1.6207 1.8388 0 108550000 41903000 66647000 21639 1754 8176 8362 33957;33958 33958 LLDAQLATGGIVDPR 15 0 1 Unmodified _LLDAQLATGGIVDPR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.9387 2 769.93048 1537.84641 69934.57 0.71592 0.00055121 0.2033 0.00015652 0.91922 0.00070773 769.930069113512 774.934612477173 98.957 1.0641 98.957 98.567 99.631 -7.6294E-06 386 88 8 0 0 0 3.6838E-15 3 61830 129.37 109.6 1 1.5052 1.7365 0 55096000 18653000 36443000 21640 1754 8176 8362 33959;33960;33961 33959 LLDAQLATGGIVDPR 15 0 1 Unmodified _LLDAQLATGGIVDPR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.9358 2 769.93048 1537.84641 NaN NaN NaN -0.067012 -5.1595E-05 NaN NaN NaN NaN 111.98 0.55692 111.98 111.8 112.35 0 0 0 0 0.00057297 1 64917 70.089 43.575 1 NaN NaN 0 11234000 0 11234000 21641 1754 8176 8362 33962 33962 LLDAQLSTGGIVDPSK 16 1 0 Unmodified _LLDAQLSTGGIVDPSK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.9521 2 807.440877 1612.8672 68267.71 0.95849 0.00077393 -0.014351 -1.1588E-05 0.94414 0.00076234 807.440912866147 811.447972313318 94.065 0.78464 94.065 93.674 94.458 7.6294E-06 309 71 7 0 0 0 9.5761E-34 2 56987 155.66 155.66 1 1.8698 2.1066 0 74916000 25641000 49276000 21642 1754 8177 8363 33963;33964 33964 LLDAQLSTGGIVDPSK 16 1 0 Unmodified _LLDAQLSTGGIVDPSK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.9431 2 807.440877 1612.8672 68037.96 0.62996 0.00050866 0.37934 0.00030629 1.0093 0.00081495 807.441144819185 811.448273872014 93.32 0.70663 93.32 93.096 93.803 7.6294E-06 333 64 7 0 0 0 1.8174E-24 2 57827 138.02 131.79 1 1.9147 2.1584 0 61058000 20976000 40082000 21643 1754 8177 8363 33965;33966 33965 LLDAQLSTGGIVDPSK 16 1 0 Unmodified _LLDAQLSTGGIVDPSK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.9493 2 807.440877 1612.8672 67952.74 0.69665 0.00056251 0.044092 3.5601E-05 0.74074 0.00059811 807.942341427304 811.44792103923 107.02 0.55407 107.02 106.85 107.41 -7.6294E-06 142 33 6 0 0 0 2.6002E-06 1 61221 91.858 91.858 1 2.2907 1.777 0 14094000 3736400 10357000 21644 1754 8177 8363 33967 33967 LLDAQLSTGGIVDPSK 16 1 0 Unmodified _LLDAQLSTGGIVDPSK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.9498 2 807.440877 1612.8672 68272.16 0.6224 0.00050255 0.0041932 3.3858E-06 0.6266 0.00050594 807.440457968195 811.447989200386 106.95 0.66717 106.95 106.69 107.36 0 181 41 7 0 0 0 5.9705E-13 2 60289 124.12 124.12 1 2.4497 1.9844 0 13316000 4243700 9071800 21645 1754 8177 8363 33968;33969 33969 LLDAVDTYIPVPAR 14 0 1 Unmodified _LLDAVDTYIPVPAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.9346 2 771.929948 1541.84534 69093.1 0.93123 0.00071884 0.074425 5.7451E-05 1.0057 0.00077629 771.930074427097 776.9340454376 113.32 0.77871 113.32 113.01 113.79 0 331 56 10 0 0 0 3.7522E-57 2 71574 190.86 177.9 1 1.6764 1.8677 0 82107000 31774000 50333000 21646 1580 8178 8364 33970;33971 33970 LLDAVDTYIPVPAR 14 0 1 Unmodified _LLDAVDTYIPVPAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.9309 2 771.929948 1541.84534 69090.55 0.74163 0.00057249 0.25332 0.00019555 0.99496 0.00076804 771.930265969497 776.934159945984 112.75 0.74496 112.75 112.47 113.22 0 299 50 9 0 0 0 1.297E-69 2 72996 201.84 201.84 1 1.632 1.8631 0 92056000 33075000 58980000 21647 1580 8178 8364 33972;33973 33973 LLDAVDTYIPVPAR 14 0 1 Unmodified _LLDAVDTYIPVPAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.4316 2 771.929948 1541.84534 69650.31 0.90673 0.00069993 0.075724 5.8453E-05 0.98246 0.00075839 771.929910548331 776.934143282413 124.11 0.71622 124.11 123.86 124.57 0 174 29 8 0 0 0 0.00011813 2 74229 82.171 82.171 1 1.2055 0.9826 0 15201000 6924600 8276800 21648 1580 8178 8364 33974;33975 33974 LLDAVDTYIPVPAR 14 0 1 Unmodified _LLDAVDTYIPVPAR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.9354 2 771.929948 1541.84534 70123.91 0.86409 0.00066702 -0.014823 -1.1442E-05 0.84927 0.00065558 771.929775965021 776.934190662045 124.01 0.81861 124.01 123.71 124.53 0 158 32 10 0 0 0 3.2513E-06 2 73213 103.08 93.396 1 1.2378 1.0444 0 17761000 7979000 9781800 21649 1580 8178 8364 33976;33977 33976 LLDDFGVNIEGVR 13 0 1 Unmodified _LLDDFGVNIEGVR_ 0 0 0 V9HWF1;Q96M94 V9HWF1 V9HWF1 HEL-S-305;KLHL15 Kelch-like protein 15 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.8875 2 723.882998 1445.75144 NaN NaN NaN 0.84565 0.00061215 NaN NaN NaN NaN 122.01 0.33149 122.01 121.88 122.21 0 0 0 0 0.005018 1 72703 59.265 33.879 1 NaN NaN 0 1089800 0 1089800 21650 1978 8179 8365 33978 33978 LLDDLFR 7 0 1 Unmodified _LLDDLFR_ 0 0 0 G3V3B0;Q69YJ6;S4R3H4;E7EQT4;Q9UKV3 G3V3B0 G3V3B0 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2509 2 446.25036 890.486168 90278.13 0.08152 3.6378E-05 0.53058 0.00023677 0.6121 0.00027315 446.250661738144 451.254556780016 102.94 0.94065 102.94 102.39 103.33 0 254 80 5 0 0 0 0.027742 1 63132 73.039 43.701 1 1.0188 1.0558 0 22912000 11587000 11325000 21651 1220 8180 8366 33979 33979 LLDEDEIR 8 0 1 Unmodified _LLDEDEIR_ 0 0 0 O43719;B4DRS4;Q5H919;Q5H918 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.7593 2 501.758746 1001.50294 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.924 1 51.924 51.424 52.424 0 0 0 0 0.052162 1 29514 53.968 24.819 1 21652 1388 8181 8367 33980 33980 LLDEEEATDNDLR 13 0 1 Unmodified _LLDEEEATDNDLR_ 0 0 0 B7Z5C1;B4DHD2;Q4W4Y1;Q8WUM4 B7Z5C1 B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.8614 2 766.857374 1531.7002 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.752 1 59.752 59.252 60.252 3.8147E-06 0 0 0 0.004941 1 34071 58.676 40.812 1 21653 974 8182 8368 33981 33981 LLDEEEATDNDLR 13 0 1 Unmodified _LLDEEEATDNDLR_ 0 0 0 B7Z5C1;B4DHD2;Q4W4Y1;Q8WUM4 B7Z5C1 B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.8625 2 766.857374 1531.7002 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.864 1 58.864 58.364 59.364 3.8147E-06 0 0 0 0.0082577 1 34236 55.401 39.829 1 21654 974 8182 8368 33982 33982 LLDESESAASSR 12 0 1 Unmodified _LLDESESAASSR_ 0 0 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.81 2 632.804414 1263.59427 NaN NaN NaN 0.60324 0.00038173 NaN NaN NaN NaN 28.889 0.24761 28.889 28.776 29.023 0 0 0 0 4.0771E-08 1 13831 106.62 93.027 1 NaN NaN 0 17222000 0 17222000 21655 1903 8183 8369 33983 33983 LLDESESAASSR 12 0 1 Unmodified _LLDESESAASSR_ 0 0 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.8086 2 632.804414 1263.59427 NaN NaN NaN -2.9842 -0.0018884 NaN NaN NaN NaN 32.773 0.50442 32.773 32.552 33.057 3.8147E-06 0 0 0 0.00052134 1 14180 88.056 56.77 1 NaN NaN 0 5746800 0 5746800 21656 1903 8183 8369 33984 33984 LLDEVFFSEK 10 1 0 Unmodified _LLDEVFFSEK_ 0 0 0 H0YLS6;H0YLC2;H0YKT8;H0YMI6;H0YMA1;H0YMZ1;H0YN18;H0YL69;P25789 H0YLS6 H0YLS6 PSMA4 Proteasome subunit alpha type;Proteasome subunit beta type;Proteasome subunit alpha type-4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.8258 2 613.818804 1225.62306 NaN NaN NaN -0.8117 -0.00049824 NaN NaN NaN NaN 104.89 0.53632 104.89 104.52 105.06 0 0 0 0 0.0031538 1 64870 77.677 67.69 1 NaN NaN 0 3165000 0 3165000 21657 1295 8184 8370 33985 33985 LLDHMQNTPGFMYK 14 1 0 2 Oxidation (M) _LLDHM(ox)QNTPGFM(ox)YK_ LLDHM(1)QNTPGFM(1)YK LLDHM(45.83)QNTPGFM(45.83)YK 0 2 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.9083 2 863.900008 1725.78546 NaN NaN NaN -0.097907 -8.4582E-05 NaN NaN NaN NaN 51.103 0.16956 51.103 51.044 51.214 3.8147E-06 0 0 0 0.0036427 1 28937 45.829 39.296 1 NaN NaN 0 9149000 0 9149000 21658 303 8185 8371 33986 33986 222;223 LLDLDIPMSVGIIDTR 16 0 1 Oxidation (M) _LLDLDIPM(ox)SVGIIDTR_ LLDLDIPM(1)SVGIIDTR LLDLDIPM(60.26)SVGIIDTR 0 1 0 A8KAN5;A0A024R2L0;Q9NZI7;A0A024R2J0 A8KAN5 A8KAN5 UBP1 Upstream-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 898.9903 2 893.984595 1785.95464 68683.11 0.90025 0.00080481 0.47864 0.0004279 1.3789 0.0012327 893.985658683584 898.988559671466 125.65 0.37167 125.65 125.49 125.86 0 72 23 4 0 0 0 9.3028E-05 1 81687 60.255 53.282 1 0.98232 1.0577 0 3142700 1381300 1761400 21659 115 8186 8372 33987 33987 99 LLDLDIPMSVGIIDTR 16 0 1 Oxidation (M) _LLDLDIPM(ox)SVGIIDTR_ LLDLDIPM(1)SVGIIDTR LLDLDIPM(46.71)SVGIIDTR 0 1 0 A8KAN5;A0A024R2L0;Q9NZI7;A0A024R2J0 A8KAN5 A8KAN5 UBP1 Upstream-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 898.9888 2 893.984595 1785.95464 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.3 1 125.3 124.8 125.8 -7.6294E-06 0 0 0 0.0042253 1 83460 46.706 33.043 1 21660 115 8186 8372 33988 33988 99 LLDLELTSR 9 0 1 Unmodified _LLDLELTSR_ 0 0 0 A0A0S2Z5D2;Q53G62;A0A0S2Z563;A0A0S2Z5H0;Q9Y2Q9;E5RGC7;H0YAT2;E5RK86;E5RFH3 A0A0S2Z5D2 A0A0S2Z5D2 MRPS28 28S ribosomal protein S28, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.3069 2 530.305864 1058.59717 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.441 1 91.441 90.941 91.941 0 0 0 0 0.014558 1 56602 59.245 17.136 1 21661 576 8187 8373 33989 33989 LLDLVQQSCNYK 12 1 0 Unmodified _LLDLVQQSCNYK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.8757 2 740.876859 1479.73916 69816.89 0.64415 0.00047723 -0.13902 -0.000103 0.50513 0.00037424 740.876900384246 744.883929631535 79.402 0.91255 79.402 79.096 80.009 0 511 80 9 0 0 0 2.2866E-05 2 46920 102.06 102.06 1 0.66976 0.76773 0 192990000 114920000 78069000 21662 812 8188 8374 33990;33991 33991 LLDLVQQSCNYK 12 1 0 Unmodified _LLDLVQQSCNYK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8842 2 740.876859 1479.73916 70160.11 0.42184 0.00031253 -0.020526 -1.5207E-05 0.40131 0.00029732 740.876958669711 744.88407800564 78.325 1.1746 78.325 78.035 79.209 0 565 101 10 0 0 0 2.3662E-29 2 47373 168.83 168.83 1 0.64856 0.75661 0 264080000 161240000 102850000 21663 812 8188 8374 33992;33993 33993 LLDLVQQSCNYK 12 1 0 Unmodified _LLDLVQQSCNYK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.8771 2 740.876859 1479.73916 69555.73 0.81809 0.0006061 -0.19717 -0.00014608 0.62092 0.00046003 740.876942484169 744.883894542149 90.64 1.4866 90.64 90.293 91.779 -7.6294E-06 500 96 10 0 0 0 4.8821E-08 3 50096 114.4 114.4 1 0.90388 0.77463 0 76329000 40841000 35489000 21664 812 8188 8374 33994;33995;33996 33995 LLDLVQQSCNYK 12 1 0 Unmodified _LLDLVQQSCNYK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.8765 2 740.876859 1479.73916 70901.82 0.75393 0.00055857 0.23662 0.00017531 0.99055 0.00073388 740.87669749768 744.884388049523 91.792 0.81495 91.792 91.417 92.232 0 126 55 4 0 0 0 0.021318 1 51289 38.75 38.75 1 0.70375 0.59672 0 1490300 837900 652360 21665 812 8188 8374 33997 33997 LLDLVQQSCNYK 12 1 0 Unmodified _LLDLVQQSCNYK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.8771 2 740.876859 1479.73916 69667.84 0.54729 0.00040547 -0.37933 -0.00028104 0.16796 0.00012444 740.876727683735 744.883810397459 90.527 1.1919 90.527 90.245 91.437 0 441 74 10 0 0 0 3.4072E-08 1 49239 117.7 117.7 1 0.87432 0.74206 0 69513000 36884000 32629000 21666 812 8188 8374 33998 33998 LLDLVQQSCNYK 12 1 0 Unmodified _LLDLVQQSCNYK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.8789 2 740.876859 1479.73916 71538.02 0.57824 0.0004284 0.28645 0.00021223 0.86469 0.00064063 740.876901533658 744.884047218307 91.545 0.64572 91.545 91.384 92.029 0 114 42 4 0 0 0 0.012218 1 50338 45.158 45.158 1 0.7225 0.57001 0 2301200 1251600 1049600 21667 812 8188 8374 33999 33999 LLDLVVQPVPR 11 0 1 Unmodified _LLDLVVQPVPR_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.8915 2 624.887355 1247.76016 77878.27 0.7143 0.00044636 0.076148 4.7584E-05 0.79045 0.00049394 624.887468468614 629.891498811462 106.43 0.76883 106.43 106.08 106.85 7.6294E-06 268 55 6 0 0 0 4.4581E-10 2 65928 130.96 63.401 1 1.393 1.439 0 37130000 15282000 21849000 21668 1945 8189 8375 34000;34001 34000 LLDLVVQPVPR 11 0 1 Unmodified _LLDLVVQPVPR_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.8889 2 624.887355 1247.76016 77306.91 0.72895 0.00045551 0.20753 0.00012968 0.93648 0.00058519 624.887546978131 629.891441482741 105.72 0.73923 105.72 105.38 106.12 7.6294E-06 273 53 7 0 0 0 2.8403E-05 2 67040 101.64 44.914 1 1.3226 1.4996 0 48257000 23750000 24507000 21669 1945 8189 8375 34002;34003 34003 LLDLVVQPVPR 11 0 1 Unmodified _LLDLVVQPVPR_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.8922 2 624.887355 1247.76016 76584.56 0.79586 0.00049732 0.39567 0.00024725 1.1915 0.00074457 624.887610111529 629.891644530243 117.73 0.95387 117.73 117.43 118.38 0 188 40 8 0 0 0 5.5775E-08 2 69287 116.52 48.959 1 2.443 2.0171 0 18993000 5459700 13533000 21670 1945 8189 8375 34004;34005 34004 LLDLVVQPVPR 11 0 1 Unmodified _LLDLVVQPVPR_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.8875 2 624.887355 1247.76016 77356.37 0.54233 0.00033889 0.25662 0.00016036 0.79895 0.00049925 624.887635182517 629.89159018058 117.54 1.0243 117.54 117.21 118.23 0 216 47 8 0 0 0 3.3566E-08 2 68218 120.07 63.511 1 2.3101 1.9852 0 21610000 6264100 15346000 21671 1945 8189 8375 34006;34007 34007 LLDNLLALIR 10 0 1 Unmodified _LLDNLLALIR_ 0 0 0 A8K5Y7;Q9HAV4;B3KPQ5;Q9H8N6;B3KNC6 A8K5Y7 A8K5Y7 XPO5 Exportin-5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.3731 2 577.368798 1152.72304 NaN NaN NaN 0.058662 3.387E-05 NaN NaN NaN NaN 133.43 0.18175 133.43 133.32 133.5 0 0 0 0 4.4261E-11 1 87393 118.5 76.386 1 NaN NaN 0 4283700 0 4283700 21672 754 8190 8376 34008 34008 LLDNLLALIR 10 0 1 Unmodified _LLDNLLALIR_ 0 0 0 A8K5Y7;Q9HAV4;B3KPQ5;Q9H8N6;B3KNC6 A8K5Y7 A8K5Y7 XPO5 Exportin-5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.3746 2 577.368798 1152.72304 NaN NaN NaN 0.6805 0.0003929 NaN NaN NaN NaN 133.27 0.40489 133.27 133 133.4 0 0 0 0 1.1583E-29 1 89386 157.68 92.64 1 NaN NaN 0 3094100 0 3094100 21673 754 8190 8376 34009 34009 LLDPANR 7 0 1 Unmodified _LLDPANR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.7267 2 399.727052 797.439552 NaN NaN NaN 0.35333 0.00014124 NaN NaN NaN NaN 29.302 0.29936 29.302 29.205 29.504 0 0 0 0 0.047335 1 14152 59.641 27.527 1 NaN NaN 0 12505000 12505000 0 21674 162 8191 8377 34010 34010 LLDPEDVDVPQPDEK 15 1 0 Unmodified _LLDPEDVDVPQPDEK_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 858.9251 2 854.917432 1707.82031 67810.88 0.85206 0.00072845 -0.060632 -5.1836E-05 0.79143 0.00067661 855.41966906407 858.9245317181 87.058 0.59417 87.058 86.792 87.387 0 164 47 6 0 0 0 4.905E-07 3 52498 102.66 102.66 1 1.4313 1.4111 0 24670000 10422000 14248000 21675 1754 8192 8378 34011;34012;34013 34011 LLDPEDVDVPQPDEK 15 1 0 Unmodified _LLDPEDVDVPQPDEK_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.9237 2 854.917432 1707.82031 67440.95 0.56835 0.00048589 0.070016 5.9858E-05 0.63836 0.00054575 855.418741389833 858.925077954283 86.439 0.44223 86.439 86.267 86.709 0 125 39 4 0 0 0 5.5264E-07 2 53212 101.39 101.39 1 1.5722 1.6118 0 25492000 12467000 13025000 21676 1754 8192 8378 34014;34015 34014 LLDPTSSR 8 0 1 Unmodified _LLDPTSSR_ 0 0 0 Q58F09;Q13724;A8K9K4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.7472 2 444.742899 887.471246 94664.77 -0.13291 -5.911E-05 1.6333 0.00072642 1.5004 0.00066731 444.742943743217 449.746854640067 30.426 0.81052 30.426 30.068 30.878 0 122 69 5 0 0 0 0.036793 1 14879 48.561 19.412 1 0.34697 0.34583 0 16563000 11119000 5444800 21677 1720 8193 8379 34016 34016 LLDSITVPVAR 11 0 1 Unmodified _LLDSITVPVAR_ 0 0 0 B4E0B2;Q3MNE1;A0A0S2Z4Z4;A8K586;A0A0S2Z5J4;O00203 B4E0B2 B4E0B2 AP3B1 AP-3 complex subunit beta;AP-3 complex subunit beta-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.3593 2 592.355888 1182.69722 NaN NaN NaN 0.14789 8.7604E-05 NaN NaN NaN NaN 95.974 0.36452 95.974 95.836 96.2 0 0 0 0 0.00036777 2 58465 91.087 59.557 1 NaN NaN 0 5694500 0 5694500 21678 572 8194 8380 34017;34018 34017 LLDSITVPVAR 11 0 1 Unmodified _LLDSITVPVAR_ 0 0 0 B4E0B2;Q3MNE1;A0A0S2Z4Z4;A8K586;A0A0S2Z5J4;O00203 B4E0B2 B4E0B2 AP3B1 AP-3 complex subunit beta;AP-3 complex subunit beta-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.3563 2 592.355888 1182.69722 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.284 1 95.284 94.784 95.784 -7.6294E-06 0 0 0 0.00050868 1 59308 75.378 44.305 1 21679 572 8194 8380 34019 34019 LLDSVPPTAISHFK 14 1 0 Unmodified _LLDSVPPTAISHFK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.6237 3 508.952203 1523.83478 84114.64 0.70927 0.00036099 -0.30872 -0.00015712 0.40055 0.00020386 508.952038857701 511.623404471906 84.529 1.6289 84.529 83.963 85.592 0 692 131 8 0 0 0 7.2155E-05 4 50985 62.035 62.035 1 1.1102 1.2565 0 152030000 67528000 84504000 21680 2065 8195 8381 34020;34021;34022;34023 34022 LLDSVPPTAISHFK 14 1 0 Unmodified _LLDSVPPTAISHFK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.6237 3 508.952203 1523.83478 84278.12 0.53706 0.00027334 0.02851 1.451E-05 0.56557 0.00028785 508.952174919467 511.623582734777 83.295 1.5463 83.295 82.723 84.269 0 646 122 8 0 0 0 7.133E-05 3 51233 57.434 57.434 1 1.1451 1.2954 0 133030000 58219000 74813000 21681 2065 8195 8381 34024;34025;34026 34025 LLDSVPPTAISHFK 14 1 0 Unmodified _LLDSVPPTAISHFK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.936 2 762.924666 1523.83478 NaN NaN NaN 1.4858 0.0011335 NaN NaN NaN NaN 83.101 0.27665 83.101 82.976 83.253 0 0 0 0 0.017172 1 50991 47.228 27.874 1 NaN NaN 0 6194300 0 6194300 21682 2065 8195 8381 34027 34027 LLDSVPPTAISHFK 14 1 0 Unmodified _LLDSVPPTAISHFK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 766.9316 2 762.924666 1523.83478 70051.23 0.86014 0.00065622 -0.0049921 -3.8086E-06 0.85514 0.00065241 762.924253650802 766.931817569611 96.478 0.88239 96.478 96.087 96.97 -7.6294E-06 232 51 6 0 0 0 0.044713 1 54199 26.971 26.971 1 1.5124 1.1938 0 5346000 2143300 3202800 21683 2065 8195 8381 34028 34028 LLDSVPPTAISHFK 14 1 0 Unmodified _LLDSVPPTAISHFK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.6238 3 508.952203 1523.83478 84072.98 0.69371 0.00035307 -0.29516 -0.00015022 0.39855 0.00020284 508.952052308112 511.623383254878 96.466 1.8585 96.466 95.889 97.748 0 728 106 10 0 0 0 0.00046206 1 54340 40.278 40.278 1 1.2089 0.98525 0 31887000 13789000 18098000 21684 2065 8195 8381 34029 34029 LLDSVPPTAISHFK 14 1 0 Unmodified _LLDSVPPTAISHFK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.6227 3 508.952203 1523.83478 84188.58 0.27001 0.00013742 -0.089484 -4.5543E-05 0.18053 9.188E-05 508.952123570872 511.623498421527 96.24 1.8878 96.24 95.596 97.484 0 714 105 9 0 0 0 0.00015968 2 53403 46.318 46.318 1 1.1897 0.96869 0 25502000 11230000 14272000 21685 2065 8195 8381 34030;34031 34031 LLDSVPPTAISHFK 14 1 0 Unmodified _LLDSVPPTAISHFK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.9318 2 762.924666 1523.83478 70313.48 0.56371 0.00043007 0.22309 0.0001702 0.7868 0.00060027 762.92419496564 766.931892307119 96.195 1.1929 96.195 95.714 96.907 0 310 70 7 0 0 0 0.0033266 1 53265 47.334 47.334 1 1.3643 1.1051 0 4379300 1826400 2553000 21686 2065 8195 8381 34032 34032 LLDTAFDLDVFK 12 1 0 Unmodified _LLDTAFDLDVFK_ 0 0 0 B4DF00;E9PDF2;E9PCR7;Q02218;B4DZ95;B4E3E9;E9PFG7;B4DK55 B4DF00 B4DF00 OGDH 2-oxoglutarate dehydrogenase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.8787 2 698.871568 1395.72858 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.76 1 125.76 125.26 126.26 0 0 0 0 0.00087443 1 81786 74.841 46.114 1 21687 968 8196 8382 34033 34033 LLDTIGISQPQWR 13 0 1 Unmodified _LLDTIGISQPQWR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.9232 2 763.919915 1525.82528 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.26 1 103.26 102.76 103.76 0 0 0 0 0.00062445 1 65298 82.261 62.271 1 21688 1259 8197 8383 34034 34034 LLDTNPEINQSDSQDSR 17 0 1 Unmodified _LLDTNPEINQSDSQDSR_ 0 0 0 Q14669 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 971.4536 2 966.45069 1930.88683 NaN NaN NaN 0.3245 0.00031361 NaN NaN NaN NaN 53.57 0.19693 53.57 53.531 53.728 0 0 0 0 0.0018677 1 29961 55.314 49.471 1 NaN NaN 0 3799000 0 3799000 21689 1736 8198 8384 34035 34035 LLDVDNR 7 0 1 Unmodified _LLDVDNR_ 0 0 0 A0A0E3JSF1;A0A0E3JG40;D3WYY8;Q14XT3;X2D546;X2D544;X2D537;X2D4V5;X2D4V3;X2D4U5;X2D4U2;X2D4K6;X2D4F2;X2D4E2;X2D4D6;X2D3Z8;X2D3Z7;X2D3Z6;K7WG81;H9E7F7;A0A059QM31;H9E7P8;A0A059RTG7;A0A059QNV4;E2DTL8;A0A1B1PEQ8;H9E7W2;G3CA49;K7WVJ5;H9E7T7;X5C6M5;X5BKA4;X2CK15;X2C841;W8DFH5;W8DBX9;W8D4U9;W8D1X2;V9K571;V9JPM6;V9JD22;V9J3S1;U5Z9R9;U5Z487;U3LSI8;U3L556;T1SWS8;T1Q632;S4STI1;R9Y478;R9Y412;Q9B2U8;Q9B138;Q8WCW3;Q8HNR6;Q8HNR1;Q85KS0;Q7YEH2;Q7YCE6;Q7Y6N0;Q7Y6M3;Q7Y626;Q6VJJ3;Q6VJD8;Q6VIG7;Q6RQ80;Q6RNN7;Q6RKW8;Q6R0V6;Q5XRW8;Q5SB08;Q5SAP1;Q5SA98;Q5S971;Q4GW12;Q4GVP5;Q4GQP0;Q4GHE1;Q4GCZ4;Q4GCG2;Q4GCC3;Q4F4V6;Q4EZD4;Q305H0;Q19MP7;Q15HH9;Q0Z7S0;Q0Z7K3;Q0Z7J0;Q0Z7F1;Q0Z7D8;Q09U41;Q06TE6;N0BMC4;L7XQ86;L7XMG0;L7NVC9;K9M370;K7X9X2;J7HPF9;J7FG21;I6UIH6;I6PZI4;I6PRP7;I6N6Q6;I3Q4M2;I3PYD8;I2E7Z7;H9T3W9;H9SA70;H9S868;H9S5Y2;H9S054;H9RV93;H9RKS9;H9RJL3;H9RF01;H9RD12;H9RAX1;H9RA87;H9QLC8;H9QH59;H9Q9T5;H9PWQ9;H9PMX8;H9PDV6;H9MK30;H9M675;H9LMC2;H9E7D1;G9LKX8;G9LHJ5;G9LG51;G9LB98;G8JF18;G8JE99;G5D8Q5;G5D8N2;G5D8K6;G5D8J3;G5D8C8;G5D863;G4W3U1;G4W3M6;F2WJ84;F2WI31;F2WGV2;F1CIN6;F1AZF2;F1AZ87;E9P659;E7E4E0;E7CNQ9;E7CM18;E5FWC0;E5EWR3;E5EWL4;E5EWG2;E5E1V1;E5E1A6;E5E079;E5DZN4;E2JFC4;E0AF97;D2IKF4;D1G421;C8YBL1;C8Y3Q5;C8Y3G4;C8XWJ6;C5H6M8;C5H6M7;C5H6M5;C5H6M4;C5H6M3;C5H6L3;C5H6K7;C5H6K6;C5H6K5;B5M7M0;B3GUF3;B3DE06;B2XP28;B2XL43;B2XIR3;B2XHT9;B2WRY8;B2CB37;B1W855;A7LFA2;A7LF11;A6ZHA9;A6ZFK3;A6ZF47;A6ZEU4;A6Z3M5;A1Z455;A0SA07;A0S3T1;A0S2P1;A0A1S6N0P5;A0A1S6M799;A0A1L7NY43;A0A1L1ZJP0;A0A1J0QNY7;A0A1J0QL53;A0A1J0PNZ2;A0A1I9S095;A0A1B1PEN9;A0A1B0W3A7;A0A1B0W1P0;A0A1B0W0T5;A0A1B0VYS2;A0A143G082;A0A143FZ56;A0A0R6NEC0;A0A0P0C1B5;A0A0N6YNR7;A0A0D4WSL8;A0A0D4WR75;A0A0D4WQL7;A0A0D3MLN1;A0A0B5E697;A0A097Q0T5;A0A097PWY7;A0A097PWR7;A0A068IXK4;A0A068BY99;A0A059SAH5;A0A059S8A4;A0A059S2S6;A0A059S242;A0A059RZV1;A0A059RX67;A0A059RVU8;A0A059RUP9;A0A059RTZ6;A0A059RSL1;A0A059RRR2;A0A059RRG1;A0A059RR09;A0A059RQT0;A0A059RQQ2;A0A059RQI1;A0A059RQ10;A0A059RPV8;A0A059RP05;A0A059RNV8;A0A059RNF8;A0A059RMK0;A0A059RLH3;A0A059RKX5;A0A059RKP1;A0A059RJF0;A0A059RIZ2;A0A059RIQ8;A0A059RI85;A0A059RI53;A0A059RHY7;A0A059RHR2;A0A059RFY4;A0A059R1T0;A0A059QVH0;A0A059QTW9;A0A059QS59;A0A059QQA7;A0A059QPY9;A0A059QPU3;A0A059QPT6;A0A059QPR4;A0A059QPE9;A0A059QPE7;A0A059QLX8;A0A059QI72;A0A023QZ25;A0A1B0W1E4;A0A059RUZ1;H9STE0;P00403;X2D4T8;A0A1B0W2I6;H9E7B8;H9E779;A0A1B1PEM6;V5N5I3;S4UQ76;Q9B1F9;Q8HQB7;Q4F6A2;Q4EYL1;L7YNE0;H9T056;H9SYF8;H9RJM6;G9LAZ4;G9C8L9;E9LAG1;E2JJS5;D7NUN3;D5M8T1;D4IH20;D3YPT7;D2K1G3;C9D661;C7BWV1;B4F438;B2XPS3;B2XHF9;B0Z6W4;A7LDC6;A6Z6E8;A6YXV0;A4ZKZ0;A1Z4V2;A0S0W7;A0A1L1ZCG1;A0A1B0WUR8;A0A141ZQJ3;A0A141ZQA2;A0A0E3D6T2;A0A097QC07;A0A097PYA5;A0A097PX98;A0A068BTX8;A0A068BST3;A0A068BP29;A0A059RMS5;A0A023QRX9;A0A023QCZ2 A0A0E3JSF1 A0A0E3JSF1 cox2;COX2;COII;MT-CO2 Cytochrome c oxidase subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.7293 2 422.729792 843.445031 93138.39 0.28721 0.00012141 -0.010329 -4.3662E-06 0.27688 0.00011704 422.72964945772 427.73378458202 37.212 0.84235 37.212 36.731 37.573 0 281 74 5 0 0 0 0.03421 1 18923 62.717 14.544 1 1.1141 1.2339 0 63113000 29687000 33425000 21690 530 8199 8385 34036 34036 LLDVIHTENK 10 1 0 Unmodified _LLDVIHTENK_ 0 0 0 A0A024RB10;A0A024RB77;G3V5T9;P24941 A0A024RB10 A0A024RB10 CDK2 Cyclin-dependent kinase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.3375 2 591.32987 1180.64519 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.048 1 49.048 48.548 49.548 0 0 0 0 1.2939E-05 1 27550 95.502 37.643 1 21691 318 8200 8386 34037 34037 LLDVLSGHEGPISGLCFNPMK 21 1 0 Oxidation (M) _LLDVLSGHEGPISGLCFNPM(ox)K_ LLDVLSGHEGPISGLCFNPM(1)K LLDVLSGHEGPISGLCFNPM(63.49)K 0 1 0 Q15269;A0A0B4J2E5;Q59FM2 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.7197 3 767.385301 2299.13407 69741.36 0.87093 0.00066834 0.076796 5.8932E-05 0.94772 0.00072727 767.719310161496 770.056564766172 123.56 0.78623 123.56 123.28 124.07 0 119 32 9 0 0 0 3.6565E-08 2 73929 63.488 63.488 1 1.0851 0.85074 0 11489000 5965700 5522900 21692 1756 8201 8387 34038;34039 34039 1625 LLDVLSGHEGPISGLCFNPMK 21 1 0 Oxidation (M) _LLDVLSGHEGPISGLCFNPM(ox)K_ LLDVLSGHEGPISGLCFNPM(1)K LLDVLSGHEGPISGLCFNPM(49.53)K 0 1 0 Q15269;A0A0B4J2E5;Q59FM2 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 767.7206 3 767.385301 2299.13407 69552.15 0.97538 0.0007485 -0.48039 -0.00036864 0.495 0.00037985 767.719145454293 770.391288798776 123.4 0.57492 123.4 123.14 123.71 7.6294E-06 65 24 6 0 0 0 3.9947E-07 1 72901 49.528 49.528 1 0.97679 0.79667 0 5830200 3080800 2749500 21693 1756 8201 8387 34040 34040 1625 LLDVLSGHEGPISGLCFNPMK 21 1 0 Unmodified _LLDVLSGHEGPISGLCFNPMK_ 0 0 0 Q15269;A0A0B4J2E5;Q59FM2 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.3975 3 762.053663 2283.13916 NaN NaN NaN -0.23409 -0.00017839 NaN NaN NaN NaN 130.39 0.34155 130.39 130.22 130.56 0 0 0 0 0.018723 1 78994 27.846 19.558 1 NaN NaN 0 1533800 0 1533800 21694 1756 8201 8388 34041 34041 LLDYTEK 7 1 0 Unmodified _LLDYTEK_ 0 0 0 A8K245;Q99986;H0YJ50;H0YJJ9 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.2339 2 441.234376 880.454199 90162.58 0.18086 7.98E-05 -0.0059397 -2.6208E-06 0.17492 7.7179E-05 441.234247387675 445.241491110197 39.009 0.69986 39.009 38.704 39.404 -3.8147E-06 191 54 5 0 0 0 0.042314 1 20079 58.604 41.662 1 1.5446 1.526 0 25558000 10855000 14703000 21695 707 8202 8389 34042 34042 LLDYVPIGPR 10 0 1 Unmodified _LLDYVPIGPR_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;Q96D47;D3DXJ4;I3L2G1;K7EQD6 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.8359 2 571.832049 1141.64954 82361.51 0.63621 0.00036381 0.0729 4.1686E-05 0.70911 0.00040549 571.832323996395 576.835977000491 97.261 0.6446 97.261 96.959 97.604 -7.6294E-06 144 57 4 0 0 0 0.007051 1 59300 57.96 57.96 1 1.3046 1.3566 0 13513000 6842800 6670300 21696 1096 8203 8390 34043 34043 LLDYVPIGPR 10 0 1 Unmodified _LLDYVPIGPR_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;Q96D47;D3DXJ4;I3L2G1;K7EQD6 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.8371 2 571.832049 1141.64954 82050.39 0.77312 0.0004421 0.081359 4.6524E-05 0.85448 0.00048862 571.83242392325 576.83603333874 96.625 0.74844 96.625 96.182 96.93 0 133 65 4 0 0 0 0.011915 1 60084 51.346 51.346 1 1.7344 1.7088 0 14623000 7680000 6943100 21697 1096 8203 8390 34044 34044 LLEAAAQSTK 10 1 0 Unmodified _LLEAAAQSTK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.2909 2 516.290214 1030.56587 85600.3 0.58227 0.00030062 -0.14302 -7.384E-05 0.43925 0.00022678 516.290295367313 520.296958705876 28.254 0.51308 28.254 28.059 28.572 0 128 36 7 0 0 0 0.00082113 2 13255 80.688 38.09 1 1.6778 1.8221 0 46417000 18499000 27917000 21698 1754 8204 8391 34045;34046 34046 LLEAAAQSTK 10 1 0 Unmodified _LLEAAAQSTK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.2972 2 516.290214 1030.56587 82757.67 0.10027 5.177E-05 -0.033979 -1.7543E-05 0.066293 3.4227E-05 516.290528691318 520.297013876519 27.662 0.43934 27.662 27.483 27.922 1.9073E-06 105 23 7 0 0 0 0.0011505 1 12969 75.378 28.952 1 1.7694 1.9819 0 81747000 27263000 54484000 21699 1754 8204 8391 34047 34047 LLEAAAQSTK 10 1 0 Unmodified _LLEAAAQSTK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.2976 2 516.290214 1030.56587 86338.48 0.2809 0.00014502 -0.11228 -5.7967E-05 0.16862 8.7057E-05 516.289996110678 520.297227760267 31.568 0.48367 31.568 31.322 31.805 1.9073E-06 106 25 6 0 0 0 0.0022162 1 12869 70.1 25.019 1 2.4829 1.9405 0 3691000 1099200 2591800 21700 1754 8204 8391 34048 34048 LLEAASVSSK 10 1 0 Unmodified _LLEAASVSSK_ 0 0 0 P15924;Q4LE79;B4E2A0;Q6ZP16 P15924 P15924 DSP;DSP variant protein Desmoplakin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.7859 2 502.784764 1003.55498 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.392 1 37.392 36.892 37.892 0 0 0 0 0.023512 1 19029 52.725 14.592 1 21701 1486 8205 8392 34049 34049 LLEAASVSSK 10 1 0 Unmodified _LLEAASVSSK_ 0 0 0 P15924;Q4LE79;B4E2A0;Q6ZP16 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.7865 2 502.784764 1003.55498 87022.92 0.52095 0.00026192 0.16116 8.1027E-05 0.6821 0.00034295 502.784895313994 506.791845193946 36.619 0.50121 36.619 36.461 36.962 3.8147E-06 100 36 6 0 0 0 0.0029784 1 18816 66.621 25.592 1 1.0447 1.0567 0 16437000 7508600 8928000 21702 1486 8205 8392 34050 34050 LLEAISSLDGK 11 1 0 Unmodified _LLEAISSLDGK_ 0 0 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.333 2 573.324254 1144.63395 80313.62 0.7018 0.00040236 -0.040447 -2.3189E-05 0.66135 0.00037917 573.324180839114 577.33126903863 85.617 0.86948 85.617 85.328 86.198 0 351 71 7 0 0 0 7.9364E-08 2 51362 112.75 101.99 1 1.036 1.1274 0 48600000 22616000 25984000 21703 2008 8206 8393 34051;34052 34051 LLEAISSLDGK 11 1 0 Unmodified _LLEAISSLDGK_ 0 0 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.3243 2 573.324254 1144.63395 80116.72 0.67618 0.00038767 -0.30874 -0.00017701 0.36744 0.00021066 573.324142557328 577.331135588572 84.721 0.87865 84.721 84.362 85.241 0 364 74 7 0 0 0 2.7331E-05 1 51952 102.06 87.395 1 1.0509 1.1749 0 104390000 49615000 54771000 21704 2008 8206 8393 34053 34053 LLEAISSLDGK 11 1 0 Unmodified _LLEAISSLDGK_ 0 0 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.3314 2 573.324254 1144.63395 80056.02 0.36787 0.00021091 -0.62052 -0.00035576 -0.25265 -0.00014485 573.323849766919 577.331192447787 97.444 1.1746 97.444 97.131 98.306 0 335 66 9 0 0 0 0.00035056 3 53956 85.355 71.585 1 1.599 1.2842 0 15117000 5132100 9985300 21705 2008 8206 8393 34054;34055;34056 34055 LLEAQACTGGIIDPSTGER 19 0 1 Unmodified _LLEAQACTGGIIDPSTGER_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 999.9967 2 994.491304 1986.96805 60976.42 0.28645 0.00028487 0.1326 0.00013187 0.41905 0.00041674 994.992978433859 999.495396591835 83.219 0.49273 83.219 83.012 83.504 0 166 42 6 0 0 0 2.4399E-08 3 49719 95.264 95.264 1 1.5856 1.6134 0 18469000 6193300 12275000 21706 1754 8207 8394 34057;34058;34059 34057 LLEAQACTGGIIDPSTGER 19 0 1 Unmodified _LLEAQACTGGIIDPSTGER_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 994.9908 2 994.491304 1986.96805 61522.16 0.53117 0.00052824 -0.15182 -0.00015098 0.37935 0.00037726 994.491760284504 999.495770653714 82.37 0.48104 82.37 82.165 82.646 0 179 42 6 0 0 0 3.6256E-08 3 50403 92.935 92.935 1 1.5903 1.5785 0 16025000 6482200 9542400 21707 1754 8207 8394 34060;34061;34062 34062 LLEAQACTGGIIDPSTGER 19 0 1 Unmodified _LLEAQACTGGIIDPSTGER_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 999.4974 2 994.491304 1986.96805 62178.36 0.18131 0.00018031 0.64384 0.00064029 0.82515 0.0008206 994.993504146866 999.496083838565 95.117 0.41849 95.117 94.917 95.336 0 107 30 5 0 0 0 0.0010598 2 52395 36.445 31.462 1 1.7517 1.5487 0 3877400 1670100 2207300 21708 1754 8207 8394 34063;34064 34063 LLEAQACTGGIIDPSTGERFPVTDAVNK 28 1 1 Unmodified _LLEAQACTGGIIDPSTGERFPVTDAVNK_ 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 993.5084 3 987.165838 2958.47569 62031.44 0.42077 0.00041537 0.1593 0.00015725 0.58007 0.00057263 987.499721964071 993.508312676512 101.19 0.38541 101.19 100.97 101.36 0 70 30 4 0 0 0 6.4391E-07 2 62185 45.546 45.546 1 1.9657 2.1345 0 15545000 5585800 9959700 21709 1754 8208 8395 34065;34066 34066 LLEAQACTGGIIDPSTGERFPVTDAVNK 28 1 1 Unmodified _LLEAQACTGGIIDPSTGERFPVTDAVNK_ 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 987.1661 3 987.165838 2958.47569 62902.89 0.54495 0.00053796 0.28364 0.00028 0.82859 0.00081795 987.499757066054 993.508831223684 100.42 0.40167 100.42 100.26 100.66 0 112 32 6 0 0 0 0.00022541 2 63134 34.106 34.106 1 2.0389 2.2933 0 13375000 5032800 8342400 21710 1754 8208 8395 34067;34068 34067 LLEAQACTGGIIDPSTGERFPVTDAVNK 28 1 1 Unmodified _LLEAQACTGGIIDPSTGERFPVTDAVNK_ 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 993.5076 3 987.165838 2958.47569 61583.88 0.57523 0.00056785 0.17613 0.00017387 0.75136 0.00074172 987.500179493724 993.17376329481 112.82 0.39908 112.82 112.64 113.04 0 97 17 9 0 0 0 1.6198E-10 2 65676 55.526 55.526 1 2.4226 2.0899 0 12849000 2823100 10026000 21711 1754 8208 8395 34069;34070 34070 LLEAQACTGGIIDPSTGERFPVTDAVNK 28 1 1 Unmodified _LLEAQACTGGIIDPSTGERFPVTDAVNK_ 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 993.5076 3 987.165838 2958.47569 60524.93 0.29074 0.00028701 -0.00090181 -8.9024E-07 0.28984 0.00028612 987.500483592652 993.507481165962 112.7 0.37467 112.7 112.5 112.87 0 96 17 9 0 0 0 4.7689E-16 2 64626 69.152 69.152 1 2.3326 1.9698 0 9314000 2652600 6661300 21712 1754 8208 8395 34071;34072 34072 LLEAQACTGGIIHPTTGQK 19 1 0 Unmodified _LLEAQACTGGIIHPTTGQK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.0167 3 665.682446 1994.02551 NaN NaN NaN -0.75792 -0.00050454 NaN NaN NaN NaN 63.801 0.33276 63.801 63.646 63.979 -3.8147E-06 0 0 0 6.4614E-06 2 36628 67.274 49.786 1 NaN NaN 0 6114000 6114000 0 21713 1486 8209 8396 34073;34074 34073 LLEAQACTGGIIHPTTGQK 19 1 0 Unmodified _LLEAQACTGGIIHPTTGQK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.6825 3 665.682446 1994.02551 76357.21 0.55225 0.00036762 -0.059982 -3.9929E-05 0.49226 0.00032769 665.682208152085 668.687954873207 73.5 0.4177 73.5 73.339 73.757 0 79 26 5 0 0 0 0.034269 1 38076 16.23 16.23 1 0.97854 0.80351 0 1856200 928400 927770 21714 1486 8209 8396 34075 34075 LLEAQIASGGVVDPVNSVFLPK 22 1 0 Unmodified _LLEAQIASGGVVDPVNSVFLPK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1127.6313 2 1127.12809 2252.24163 59089.41 0.40249 0.00045366 0.26991 0.00030423 0.67241 0.00075789 1127.62972221918 1131.63782820333 123.84 0.39384 123.84 123.64 124.03 0 135 27 8 0 0 0 4.1407E-11 1 82289 88.507 83.877 1 0.6853 0.69563 0 12815000 7599600 5215900 21715 1486 8210 8397 34076 34076 LLEAQIATGGIIDPEESHR 19 0 1 Unmodified _LLEAQIATGGIIDPEESHR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.0294 3 683.691887 2048.05383 73929.59 0.88763 0.00060687 0.66363 0.00045372 1.5513 0.0010606 683.692732901388 687.362594404874 93.267 0.72411 93.267 92.929 93.653 0 263 60 8 0 0 0 1.185E-05 1 56425 51.524 51.524 1 2.1517 2.383 0 62901000 23033000 39868000 21716 1754 8211 8398 34077 34077 LLEAQIATGGIIDPEESHR 19 0 1 Unmodified _LLEAQIATGGIIDPEESHR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.6946 3 683.691887 2048.05383 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.172 1 93.172 92.672 93.672 0 0 0 0 0.0070183 1 56492 53.453 38.84 1 21717 1754 8211 8398 34078 34078 LLEAQIATGGIIDPEESHR 19 0 1 Unmodified _LLEAQIATGGIIDPEESHR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1030.0381 2 1025.03419 2048.05383 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.279 1 93.279 92.779 93.779 0 0 0 0 0.00043489 1 56565 57.136 48.181 1 21718 1754 8211 8398 34079 34079 LLEAQIATGGIIDPEESHR 19 0 1 Unmodified _LLEAQIATGGIIDPEESHR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.028 3 683.691887 2048.05383 74643.84 0.71202 0.0004868 0.40194 0.0002748 1.114 0.00076161 684.027192772664 687.362054819441 92.398 0.62795 92.398 92.05 92.678 7.6294E-06 272 52 8 0 0 0 1.0127E-09 3 57094 99.413 99.413 1 2.1316 2.4613 0 70496000 18233000 52262000 21719 1754 8211 8398 34080;34081;34082 34080 LLEAQIATGGIIDPEESHR 19 0 1 Unmodified _LLEAQIATGGIIDPEESHR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.0281 3 683.691887 2048.05383 71788.84 0.6613 0.00045213 -0.56476 -0.00038612 0.096546 6.6008E-05 684.026494728913 687.027921760431 106.21 0.50871 106.21 105.97 106.48 0 120 24 8 0 0 0 0.0088722 1 60708 22.902 22.902 1 2.8399 2.4401 0 6430000 1513600 4916400 21720 1754 8211 8398 34083 34083 LLEAQIATGGIIDPK 15 1 0 Unmodified _LLEAQIATGGIIDPK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.951 2 769.943056 1537.87156 71922.2 0.73517 0.00056604 1.2548 0.00096616 1.99 0.0015322 770.446416332317 773.95022548051 101.53 0.19214 101.53 101.38 101.57 0 41 14 5 0 0 0 0.0003407 1 62418 59.57 46.614 1 0.69226 0.69073 0 9702300 5531100 4171100 21721 1486 8212 8399 34084 34084 LLEAQIATGGIIDPK 15 1 0 Unmodified _LLEAQIATGGIIDPK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.9502 2 769.943056 1537.87156 70678.27 0.5351 0.000412 0.12139 9.3461E-05 0.65649 0.00050546 770.444643729248 774.451668733029 100.91 0.48653 100.91 100.68 101.16 7.6294E-06 109 37 4 0 0 0 4.9077E-05 1 63442 85.522 76.089 1 0.4532 0.45368 0 13962000 9409900 4552500 21722 1486 8212 8399 34085 34085 LLEAQIATGGVIDPVHSHR 19 0 1 Unmodified _LLEAQIATGGVIDPVHSHR_ 0 0 0 A0A075B730;A0A087X1U6;P58107;Q15149;D3DWL0 A0A075B730;P58107;Q15149 Q15149 EPPK1;PLEC;PLEC1 Epiplakin;Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.7798 4 504.027357 2012.08032 85834.7 0.18644 9.397E-05 -0.21189 -0.0001068 -0.025456 -1.2831E-05 504.277785137273 506.529377771643 81.608 0.86745 81.608 81.228 82.096 0 298 75 9 0 0 0 0.0033456 1 48568 35.044 35.044 1 1.8065 1.9994 0 61104000 25733000 35370000 21723 1754;397;1622 8213 8400 34086 34086 LLEAQVASGFLVDPLNNQR 19 0 1 Unmodified _LLEAQVASGFLVDPLNNQR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1048.0675 2 1042.56038 2083.1062 60144.8 0.57687 0.00060142 -0.17316 -0.00018053 0.40371 0.00042089 1042.56020561114 1047.563422733 121.2 0.5028 121.2 120.86 121.37 0 133 33 8 0 0 0 1.5915E-05 2 78253 83.729 83.729 1 1.6307 1.6773 0 14196000 6101400 8094600 21724 397;1622 8214 8401 34087;34088 34087 LLEAQVASGFLVDPLNNQR 19 0 1 Unmodified _LLEAQVASGFLVDPLNNQR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1048.0668 2 1042.56038 2083.1062 60708.48 0.85948 0.00089606 -0.06299 -6.5671E-05 0.79649 0.00083039 1043.06145821837 1048.06543300678 120.77 0.40115 120.77 120.49 120.89 0 96 28 5 0 0 0 2.1241E-06 2 79887 105.14 105.14 1 1.4747 1.4594 0 12371000 5108100 7262600 21725 397;1622 8214 8401 34089;34090 34090 LLEDLMDELLEAR 13 0 1 Unmodified _LLEDLMDELLEAR_ 0 0 0 B3KMG2;Q9Y4R8 B3KMG2 B3KMG2 TELO2 Telomere length regulation protein TEL2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.9379 3 520.604363 1558.79126 88029.23 0.60655 0.00031577 -1.0378 -0.00054027 -0.43122 -0.00022449 520.938297716914 523.939783864817 90.906 0.55168 90.906 90.588 91.14 0 132 42 5 0 0 0 0.019834 2 56161 20.953 20.953 1 1.3306 1.3705 0 21379000 10133000 11246000 21726 904 8215 8402 34091;34092 34092 LLEDSALSK 9 1 0 Unmodified _LLEDSALSK_ 0 0 0 A0A024R137;A0A024R102;Q96GM5;B4DF50 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2716 2 488.27149 974.528426 88682.63 0.39491 0.00019282 -0.098086 -4.7893E-05 0.29683 0.00014493 488.271237764862 492.278613075447 46.403 0.6387 46.403 46.055 46.694 0 134 54 4 0 0 0 0.023107 1 24980 48.794 13.986 1 0.74589 0.76865 0 10855000 5574200 5281300 21727 65 8216 8403 34093 34093 LLEDSALSK 9 1 0 Unmodified _LLEDSALSK_ 0 0 0 A0A024R137;A0A024R102;Q96GM5;B4DF50 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.2724 2 488.27149 974.528426 88441.55 0.46174 0.00022545 0.32771 0.00016001 0.78945 0.00038547 488.271370424243 492.278820799655 45.421 0.56824 45.421 45.148 45.716 0 131 50 4 0 0 0 0.010772 2 24898 58.981 29.408 1 0.87715 0.8975 0 17445000 8423000 9022200 21728 65 8216 8403 34094;34095 34095 LLEEALLR 8 0 1 Unmodified _LLEEALLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.7964 2 478.792392 955.570232 87062.51 0.37585 0.00017996 0.28842 0.00013809 0.66427 0.00031805 478.792529073339 483.796401330577 85.152 0.71143 85.152 84.786 85.497 0 202 57 6 0 0 0 0.0088018 2 51072 77.058 20.667 1 0.65332 0.722 0 57179000 34847000 22333000 21729 1665 8217 8404 34096;34097 34097 LLEEALLR 8 0 1 Unmodified _LLEEALLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.7965 2 478.792392 955.570232 87615.03 0.5137 0.00024596 0.52971 0.00025362 1.0434 0.00049957 478.79270369219 483.796500578991 83.947 0.57803 83.947 83.765 84.343 7.6294E-06 149 47 6 0 0 0 0.0083247 2 51571 79.116 28.787 1 0.73069 0.80858 0 42183000 23424000 18759000 21730 1665 8217 8404 34098;34099 34099 LLEEALLR 8 0 1 Unmodified _LLEEALLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.7928 2 478.792392 955.570232 87916.81 0.498 0.00023844 0.091096 4.3616E-05 0.5891 0.00028206 478.792401379088 483.796493939862 96.904 0.82577 96.904 96.647 97.473 0 146 41 5 0 0 0 0.012693 2 54401 67.032 26.929 1 0.35977 0.30442 0 4947700 3472700 1475000 21731 1665 8217 8404 34100;34101 34100 LLEEALLR 8 0 1 Unmodified _LLEEALLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.7923 2 478.792392 955.570232 87140.25 0.16164 7.7393E-05 0.31959 0.00015302 0.48124 0.00023041 478.792518053169 483.79651463779 96.75 0.73089 96.75 96.48 97.21 0 123 35 6 0 0 0 0.012693 2 53513 67.032 19.965 1 0.35708 0.31264 0 4197100 2974100 1223000 21732 1665 8217 8404 34102;34103 34102 LLEEEEEK 8 1 0 Unmodified _LLEEEEEK_ 0 0 0 B3KSI1;B2RBP7;Q9H4E7 B3KSI1 B3KSI1 DEF6 Differentially expressed in FDCP 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7579 2 509.750587 1017.48662 85234.73 0.28875 0.00014719 -0.059347 -3.0252E-05 0.22941 0.00011694 509.750497210991 513.757515650272 22.602 0.43353 22.602 22.412 22.845 0 141 26 8 0 0 0 0.0011347 2 8592 111.82 0 1 0.98662 1.0608 0 40039000 19095000 20944000 21733 879 8218 8405 34104;34105 34104 LLEEEIQAPTSSK 13 1 0 Unmodified _LLEEEIQAPTSSK_ 0 0 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.8811 2 722.880121 1443.74569 72072.68 0.77014 0.00055672 -0.0060413 -4.3672E-06 0.7641 0.00055235 722.88000557544 726.887131353615 65.541 0.83402 65.541 65.149 65.983 0 404 75 8 0 0 0 6.2579E-06 2 37641 104.79 86.015 1 1.4205 1.5591 0 53460000 22669000 30791000 21734 46 8219 8406 34106;34107 34107 LLEEEIQAPTSSK 13 1 0 Unmodified _LLEEEIQAPTSSK_ 0 0 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.8871 2 722.880121 1443.74569 72755.81 0.54306 0.00039257 0.051414 3.7166E-05 0.59447 0.00042973 722.87986486387 726.887017585444 64.496 0.72182 64.496 64.164 64.886 0 346 64 8 0 0 0 3.5838E-30 2 37921 167.18 128.16 1 1.5949 1.7956 0 57411000 20745000 36665000 21735 46 8219 8406 34108;34109 34109 LLEEEIQAPTSSK 13 1 0 Unmodified _LLEEEIQAPTSSK_ 0 0 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.8879 2 722.880121 1443.74569 71408.95 0.76313 0.00055165 -0.32964 -0.00023829 0.43349 0.00031336 723.380323760747 726.887112373974 75.051 0.80911 75.051 74.753 75.562 7.6294E-06 253 58 7 0 0 0 7.4082E-06 2 39857 103.34 81.256 1 1.3409 1.0694 0 6847300 3060400 3786900 21736 46 8219 8406 34110;34111 34110 LLEEEIQAPTSSK 13 1 0 Unmodified _LLEEEIQAPTSSK_ 0 0 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 726.8875 2 722.880121 1443.74569 70034.09 0.54105 0.00039111 0.24795 0.00017924 0.789 0.00057035 722.879583034895 726.887157491058 75.503 0.89812 75.503 75.111 76.009 0 251 65 7 0 0 0 8.5266E-06 2 39281 101.93 73.53 1 1.6181 1.3209 0 4695800 2026200 2669600 21737 46 8219 8406 34112;34113 34112 LLEENVSAFK 10 1 0 Unmodified _LLEENVSAFK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.3181 2 575.311146 1148.60774 78632.13 0.65577 0.00037727 0.33588 0.00019324 0.99164 0.0005705 575.31128825117 579.318686191084 71.791 1.4488 71.791 71.078 72.526 0 747 119 9 0 0 0 0.00050835 2 41695 85.731 44.282 1 0.90543 1.0446 0 218250000 117020000 101230000 21738 2070 8220 8407 34114;34115 34115 LLEENVSAFK 10 1 0 Unmodified _LLEENVSAFK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3183 2 575.311146 1148.60774 78305.82 0.67802 0.00039007 0.14625 8.4141E-05 0.82427 0.00047421 575.311156353827 579.318520142647 70.574 1.3924 70.574 69.819 71.212 0 740 109 9 0 0 0 0.00018094 2 41907 94.692 52.89 1 0.85119 0.9926 0 259620000 134750000 124860000 21739 2070 8220 8407 34116;34117 34116 LLEENVSAFK 10 1 0 Unmodified _LLEENVSAFK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.3181 2 575.311146 1148.60774 79118.36 0.46678 0.00026854 0.18634 0.0001072 0.65312 0.00037575 575.311276678359 579.318458482597 81.806 1.996 81.806 81.213 83.209 0 586 120 9 0 0 0 0.00048323 3 44273 86.136 49.375 1 1.7768 1.4792 0 47559000 16852000 30707000 21740 2070 8220 8407 34118;34119;34120 34118 LLEENVSAFK 10 1 0 Unmodified _LLEENVSAFK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.3118 2 575.311146 1148.60774 79606.81 0.37914 0.00021813 0.23427 0.00013478 0.61341 0.0003529 575.311270914421 579.318497472558 82.007 2.0967 82.007 81.303 83.4 0 595 118 9 0 0 0 1.2241E-05 3 43566 103.55 60.3 1 1.7824 1.4898 0 43844000 14771000 29074000 21741 2070 8220 8407 34121;34122;34123 34122 LLEEQLQHEISNK 13 1 0 Unmodified _LLEEQLQHEISNK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.6147 3 527.614138 1579.82059 85288.95 0.43313 0.00022852 0.32852 0.00017333 0.76164 0.00040185 527.614013921707 530.286235367522 74.248 0.53529 74.248 74 74.536 0 107 34 5 0 0 0 0.019942 1 39313 26.13 23.743 1 0.43019 0.36379 0 2041700 1114200 927570 21742 197 8221 8408 34124 34124 LLEESIANLNR 11 0 1 Unmodified _LLEESIANLNR_ 0 0 0 D6RDA9;Q3MSN4;Q3MSN1;F5ATB8;E5KQF5;H6V745;F1D8N4;B6ZGU6;E5KQF6;P04150 D6RDA9 D6RDA9 NR3C1 Glucocorticoid receptor MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3748 2 636.351334 1270.68811 80280.62 0.591 0.00037608 -0.017709 -1.1269E-05 0.57329 0.00036482 636.35059956682 641.35611809289 78.012 0.36145 78.012 77.772 78.133 0 59 30 4 0 0 0 0.02473 1 47262 69.423 39.614 1 1.9819 1.9865 0 9157700 2970100 6187600 21743 1083 8222 8409 34125 34125 LLEFQLALK 9 1 0 Unmodified _LLEFQLALK_ 0 0 0 V9HW72;A8K690;P31948;H0YGI8 V9HW72 V9HW72 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.8386 2 537.831517 1073.64848 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.2 1 112.2 111.7 112.7 0 0 0 0 0.015002 1 70796 58.815 31.29 1 21744 758 8223 8410 34126 34126 LLEFQLALK 9 1 0 Unmodified _LLEFQLALK_ 0 0 0 V9HW72;A8K690;P31948;H0YGI8 V9HW72 V9HW72 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.8387 2 537.831517 1073.64848 NaN NaN NaN 0.0095622 5.1429E-06 NaN NaN NaN NaN 111.56 0.30479 111.56 111.37 111.67 0 0 0 0 0.0013201 1 71949 86.794 48.002 1 NaN NaN 0 1728200 0 1728200 21745 758 8223 8410 34127 34127 LLEGEDAHLSSQQASGQSYSSR 22 0 1 Unmodified _LLEGEDAHLSSQQASGQSYSSR_ 0 0 0 CON__P08779;P08779 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.0341 3 784.035042 2349.0833 NaN NaN NaN 0.18369 0.00014402 NaN NaN NaN NaN 45.365 0.4854 45.365 45.127 45.613 -3.8147E-06 0 0 0 1.1464E-06 1 24315 56.055 34.822 1 NaN NaN 0 42712000 42712000 0 + 21746 1159 8224 8411 34128 34128 LLEGEDAHLSSQQASGQSYSSR 22 0 1 Unmodified _LLEGEDAHLSSQQASGQSYSSR_ 0 0 0 CON__P08779;P08779 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.3712 3 784.035042 2349.0833 NaN NaN NaN -0.16635 -0.00013042 NaN NaN NaN NaN 44.282 0.48752 44.282 44.079 44.566 0 0 0 0 3.5069E-09 2 24093 58.914 34.12 1 NaN NaN 0 35660000 35660000 0 + 21747 1159 8224 8411 34129;34130 34129 LLEGEDAHLSSQQASGQSYSSR 22 0 1 Unmodified _LLEGEDAHLSSQQASGQSYSSR_ 0 0 0 CON__P08779;P08779 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.0355 3 784.035042 2349.0833 NaN NaN NaN -0.48135 -0.00037739 NaN NaN NaN NaN 53.323 0.7066 53.323 53.136 53.842 0 0 0 0 7.914E-07 1 26394 45.395 30.923 1 NaN NaN 0 9078600 9078600 0 + 21748 1159 8224 8411 34131 34131 LLEGEDAHLSSQQASGQSYSSR 22 0 1 Unmodified _LLEGEDAHLSSQQASGQSYSSR_ 0 0 0 CON__P08779;P08779 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.0357 3 784.035042 2349.0833 NaN NaN NaN 0.15194 0.00011913 NaN NaN NaN NaN 53.921 0.61274 53.921 53.7 54.313 0 0 0 0 0.00048052 1 26140 31.067 21.813 1 NaN NaN 0 5968000 5968000 0 + 21749 1159 8224 8411 34132 34132 LLEGEDAHLSSSQFSSGSQSSR 22 0 1 Unmodified _LLEGEDAHLSSSQFSSGSQSSR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;Q13092;CON__Q61782 CON__P02533;CON__Q61782 CON__P02533 KRT14;K14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.6938 3 770.359525 2308.05675 NaN NaN NaN -0.28369 -0.00021854 NaN NaN NaN NaN 56.323 0.80177 56.323 55.987 56.789 -3.8147E-06 0 0 0 3.5447E-09 1 32210 72.086 68.847 1 NaN NaN 0 59659000 59659000 0 + 21750 1150;1176 8225 8412 34133 34133 LLEGEDAHLSSSQFSSGSQSSR 22 0 1 Unmodified _LLEGEDAHLSSSQFSSGSQSSR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;Q13092;CON__Q61782 CON__P02533;CON__Q61782 CON__P02533 KRT14;K14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.6945 3 770.359525 2308.05675 NaN NaN NaN -0.18639 -0.00014359 NaN NaN NaN NaN 66.991 1.2914 66.991 66.665 67.956 0 0 0 0 0.00095915 1 34749 40.381 40.381 1 NaN NaN 0 15595000 15595000 0 + 21751 1150;1176 8225 8412 34134 34134 LLEGEDAHLSSSQFSSGSQSSR 22 0 1 Unmodified _LLEGEDAHLSSSQFSSGSQSSR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;Q13092;CON__Q61782 CON__P02533;CON__Q61782 CON__P02533 KRT14;K14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 770.694 3 770.359525 2308.05675 NaN NaN NaN -0.32964 -0.00025394 NaN NaN NaN NaN 67.604 1.0978 67.604 67.268 68.366 0 0 0 0 1.6397E-13 1 34427 88.79 80.29 1 NaN NaN 0 12842000 12842000 0 + 21752 1150;1176 8225 8412 34135 34135 LLEGEDAHLTQYK 13 1 0 Unmodified _LLEGEDAHLTQYK_ 0 0 0 CON__Q04695;Q04695;F5GWP8;Q14666 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.5939 3 506.259584 1515.75692 85538.79 0.24526 0.00012416 -0.14291 -7.2351E-05 0.10235 5.1814E-05 506.2595219169 509.265502390887 52.524 0.5366 52.524 52.305 52.842 0 149 38 6 0 0 0 0.0013692 1 29154 39.746 34.855 1 0.23171 0.25074 0 43266000 37032000 6233900 + 21753 1168 8226 8413 34136 34136 LLEGEDAHLTQYK 13 1 0 Unmodified _LLEGEDAHLTQYK_ 0 0 0 CON__Q04695;Q04695;F5GWP8;Q14666 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.3885 2 758.885738 1515.75692 NaN NaN NaN 0.16421 0.00012462 NaN NaN NaN NaN 52.538 0.30776 52.538 52.385 52.693 0 0 0 0 0.0045241 1 29203 68.893 36.053 1 NaN NaN 0 10072000 10072000 0 + 21754 1168 8226 8413 34137 34137 LLEGEDAHLTQYK 13 1 0 Unmodified _LLEGEDAHLTQYK_ 0 0 0 CON__Q04695;Q04695;F5GWP8;Q14666 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.2596 3 506.259584 1515.75692 87034.89 0.39825 0.00020162 -0.098938 -5.0088E-05 0.29931 0.00015153 506.259592434493 508.93059262083 51.273 0.55925 51.273 51.008 51.567 3.8147E-06 146 43 6 0 0 0 0.0076666 1 28961 32.624 27.902 1 0.17614 0.18197 0 24995000 20219000 4776600 + 21755 1168 8226 8413 34138 34138 LLEGEDAHLTQYK 13 1 0 Unmodified _LLEGEDAHLTQYK_ 0 0 0 CON__Q04695;Q04695;F5GWP8;Q14666 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.3881 2 758.885738 1515.75692 NaN NaN NaN 0.61314 0.0004653 NaN NaN NaN NaN 51.251 0.19344 51.251 51.176 51.369 0 0 0 0 9.1196E-09 1 29045 119.27 90.875 1 NaN NaN 0 4833400 4833400 0 + 21756 1168 8226 8413 34139 34139 LLEGEDAHLTQYK 13 1 0 Unmodified _LLEGEDAHLTQYK_ 0 0 0 CON__Q04695;Q04695;F5GWP8;Q14666 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.5939 3 506.259584 1515.75692 86764.17 0.30871 0.00015629 -0.098943 -5.0091E-05 0.20977 0.0001062 506.593925984664 508.930823958189 61.465 0.65516 61.465 61.171 61.826 -3.8147E-06 220 52 6 0 0 0 0.003693 1 31447 32.275 29.489 1 0.76852 0.60751 0 5150700 2917600 2233100 + 21757 1168 8226 8413 34140 34140 LLEGEDAHLTQYK 13 1 0 Unmodified _LLEGEDAHLTQYK_ 0 0 0 CON__Q04695;Q04695;F5GWP8;Q14666 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.2595 3 506.259584 1515.75692 85851.78 0.19363 9.8025E-05 0.002392 1.211E-06 0.19602 9.9236E-05 506.259478038165 508.930919615892 62.013 0.49188 62.013 61.789 62.281 0 202 35 8 0 0 0 0.018117 2 31134 21.06 18.341 1 0.75883 0.61727 0 4525400 2530800 1994500 + 21758 1168 8226 8413 34141;34142 34141 LLEGEECR 8 0 1 Unmodified _LLEGEECR_ 0 0 0 CON__P35908;P35908;Q01546;CON__Q01546;CON__P07744;CON__Q6NXH9;H0YIC5;CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4;B4DQ49 CON__P35908;CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259;CON__P13647;CON__Q7RTS7;CON__Q8N1N4-2 CON__P35908 KRT2;KRT76;KRT73;KRT75;KRT6C;KRT6A;KRT5;KRT74;KRT78 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 78 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.2368 2 503.237124 1004.45969 NaN NaN NaN -0.62197 -0.000313 NaN NaN NaN NaN 24.956 0.54608 24.956 24.668 25.214 1.9073E-06 0 0 0 0.0065427 1 10507 85.064 59.327 1 NaN NaN 0 111360000 111360000 0 + 21759 1166;1162;859;1154;1147;1180;1170;1178 8227 8414 34143 34143 LLEGEECR 8 0 1 Unmodified _LLEGEECR_ 0 0 0 CON__P35908;P35908;Q01546;CON__Q01546;CON__P07744;CON__Q6NXH9;H0YIC5;CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4;B4DQ49 CON__P35908;CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259;CON__P13647;CON__Q7RTS7;CON__Q8N1N4-2 CON__P35908 KRT2;KRT76;KRT73;KRT75;KRT6C;KRT6A;KRT5;KRT74;KRT78 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 78 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.2372 2 503.237124 1004.45969 NaN NaN NaN -0.12702 -6.3919E-05 NaN NaN NaN NaN 24.705 0.53363 24.705 24.478 25.012 0 0 0 0 1.3715E-08 1 10349 138.33 82.729 1 NaN NaN 0 62863000 62863000 0 + 21760 1166;1162;859;1154;1147;1180;1170;1178 8227 8414 34144 34144 LLEGEECR 8 0 1 Unmodified _LLEGEECR_ 0 0 0 CON__P35908;P35908;Q01546;CON__Q01546;CON__P07744;CON__Q6NXH9;H0YIC5;CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4;B4DQ49 CON__P35908;CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259;CON__P13647;CON__Q7RTS7;CON__Q8N1N4-2 CON__P35908 KRT2;KRT76;KRT73;KRT75;KRT6C;KRT6A;KRT5;KRT74;KRT78 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 78 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 503.2373 2 503.237124 1004.45969 NaN NaN NaN -0.14337 -7.2148E-05 NaN NaN NaN NaN 27.532 0.85474 27.532 27.309 28.163 0 0 0 0 0.025534 1 10637 61.999 46.618 1 NaN NaN 0 17328000 17328000 0 + 21761 1166;1162;859;1154;1147;1180;1170;1178 8227 8414 34145 34145 LLEGEECR 8 0 1 Unmodified _LLEGEECR_ 0 0 0 CON__P35908;P35908;Q01546;CON__Q01546;CON__P07744;CON__Q6NXH9;H0YIC5;CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4;B4DQ49 CON__P35908;CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259;CON__P13647;CON__Q7RTS7;CON__Q8N1N4-2 CON__P35908 KRT2;KRT76;KRT73;KRT75;KRT6C;KRT6A;KRT5;KRT74;KRT78 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 78 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 503.2371 2 503.237124 1004.45969 NaN NaN NaN 0.162 8.1525E-05 NaN NaN NaN NaN 27.581 0.77903 27.581 27.304 28.083 -1.9073E-06 0 0 0 0.005683 1 10200 87.435 61.212 1 NaN NaN 0 8931500 8931500 0 + 21762 1166;1162;859;1154;1147;1180;1170;1178 8227 8414 34146 34146 LLEGEEER 8 0 1 Unmodified _LLEGEEER_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3;A0A0C4DGC5;P20700;E9PBF6;B4DZT3;Q03252;A0A0A7M1X5 P02545;P20700;Q03252 P02545 LMNA;LMNB1;LMNB2 Prelamin-A/C;Lamin-A/C;Lamin-B1;Lamin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.747 2 487.743096 973.47164 86126.79 -0.11239 -5.4818E-05 0.13714 6.6887E-05 0.024746 1.207E-05 487.743194298723 492.747151145517 24.842 0.82318 24.842 24.364 25.187 0 193 37 9 0 0 0 0.0029606 2 10518 98.299 61.279 1 1.1963 1.4162 0 365660000 160860000 204800000 21763 1440;1502;1682 8228 8415 34147;34148 34148 LLEGEEER 8 0 1 Unmodified _LLEGEEER_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3;A0A0C4DGC5;P20700;E9PBF6;B4DZT3;Q03252;A0A0A7M1X5 P02545;P20700;Q03252 P02545 LMNA;LMNB1;LMNB2 Prelamin-A/C;Lamin-A/C;Lamin-B1;Lamin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.7439 2 487.743096 973.47164 85975.73 0.38509 0.00018783 -0.1299 -6.3357E-05 0.2552 0.00012447 487.743012035679 492.747124463172 24.593 0.65124 24.593 24.36 25.012 -1.9073E-06 145 30 7 0 0 0 0.005916 2 10260 88.954 63.217 1 1.2061 1.3966 0 280800000 125380000 155420000 21764 1440;1502;1682 8228 8415 34149;34150 34149 LLEGEEER 8 0 1 Unmodified _LLEGEEER_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3;A0A0C4DGC5;P20700;E9PBF6;B4DZT3;Q03252;A0A0A7M1X5 P02545;P20700;Q03252 P02545 LMNA;LMNB1;LMNB2 Prelamin-A/C;Lamin-A/C;Lamin-B1;Lamin-B2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.7475 2 487.743096 973.47164 85539.34 0.19746 9.6309E-05 -0.27396 -0.00013362 -0.076497 -3.7311E-05 487.742979717341 492.747026706134 27.413 0.94835 27.413 27.026 27.974 0 196 40 9 0 0 0 0.0070613 2 10636 84.568 56.145 1 1.2596 1.0831 0 46479000 19920000 26558000 21765 1440;1502;1682 8228 8415 34151;34152 34151 LLEGEEER 8 0 1 Unmodified _LLEGEEER_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3;A0A0C4DGC5;P20700;E9PBF6;B4DZT3;Q03252;A0A0A7M1X5 P02545;P20700;Q03252 P02545 LMNA;LMNB1;LMNB2 Prelamin-A/C;Lamin-A/C;Lamin-B1;Lamin-B2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.7462 2 487.743096 973.47164 86138.8 -0.051223 -2.4984E-05 -0.069605 -3.3949E-05 -0.12083 -5.8933E-05 487.742979382524 492.747063509588 27.489 0.62164 27.489 27.304 27.926 0 107 26 8 0 0 0 0.015121 1 10146 61.962 46.523 1 1.226 1.0208 0 7103600 3168200 3935400 21766 1440;1502;1682 8228 8415 34153 34153 LLEGEEQR 8 0 1 Unmodified _LLEGEEQR_ 0 0 0 A0JNT2;CON__Q61726;A0A087X106;CON__O43790;B4DN72;A8K872;CON__Q6NT21;CON__P78385;CON__Q14533;O43790;P78385;Q14533 A0JNT2 A0JNT2 KRT83;KRT81;KRT86 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb3;Keratin, type II cuticular Hb1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.2518 2 487.251089 972.487624 NaN NaN NaN 0.2111 0.00010286 NaN NaN NaN NaN 22.923 0.41607 22.923 22.748 23.164 0 0 0 0 0.030565 1 8927 58.917 23.037 1 NaN NaN 0 5805900 5805900 0 + 21767 447 8229 8416 34154 34154 LLEGEESR 8 0 1 Unmodified _LLEGEESR_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__Q9H552;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;CON__P08729;CON__Q9DCV7;V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;H7C5W5;B3KWQ6;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P41219;P17661;CON__Q3KNV1;P08729 CON__P05787;CON__P08729;V9HWE1;CON__Q3KNV1 V9HWE1 KRT8;KRT84;HEL113;VIM;PRPH;tmp_locus_29;DES;KRT7 Keratin, type II cytoskeletal 8;Keratin, type II cuticular Hb4;Vimentin;Peripherin;Desmin;Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7378 2 466.737814 931.461075 87170.47 0.16866 7.8719E-05 0.066096 3.0849E-05 0.23475 0.00010957 466.737861431473 471.741885101871 22.913 0.8405 22.913 22.588 23.429 0 234 45 9 0 0 0 0.006912 2 8804 85.212 43.559 1 1.1593 1.3739 0 506010000 236550000 269460000 + 21768 1457;1156;1171;1158 8230 8417 34155;34156 34156 LLEGEESR 8 0 1 Unmodified _LLEGEESR_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__Q9H552;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;CON__P08729;CON__Q9DCV7;V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;H7C5W5;B3KWQ6;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P41219;P17661;CON__Q3KNV1;P08729 CON__P05787;CON__P08729;V9HWE1;CON__Q3KNV1 V9HWE1 KRT8;KRT84;HEL113;VIM;PRPH;tmp_locus_29;DES;KRT7 Keratin, type II cytoskeletal 8;Keratin, type II cuticular Hb4;Vimentin;Peripherin;Desmin;Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.7419 2 466.737814 931.461075 88453.27 0.17824 8.3193E-05 0.89001 0.0004154 1.0683 0.00049859 466.737731338183 471.742388570335 25.023 1.1669 25.023 24.802 25.968 0 174 53 8 0 0 0 0.015121 2 8961 61.962 35.791 1 2.0642 1.7552 0 9105900 3334000 5771900 + 21769 1457;1156;1171;1158 8230 8417 34157;34158 34157 LLEGTIVNVPEK 12 1 0 Unmodified _LLEGTIVNVPEK_ 0 0 0 Q9H072;A0A024R5X7;O76031 Q9H072 Q9H072 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3881 2 656.37956 1310.74457 NaN NaN NaN -0.24815 -0.00016288 NaN NaN NaN NaN 83.843 0.53294 83.843 83.494 84.027 0 0 0 0 0.0021355 1 51375 70.1 39.026 1 NaN NaN 0 7198900 0 7198900 21770 191 8231 8418 34159 34159 LLEHLPQEVPYNVQQK 16 1 0 Unmodified _LLEHLPQEVPYNVQQK_ 0 0 0 O75616;K7EQJ8 O75616 O75616 ERAL1 GTPase Era, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.6884 3 645.682664 1934.02616 78990.48 0.75811 0.0004895 -0.12645 -8.1647E-05 0.63166 0.00040785 645.682462050628 648.688582985818 79.148 0.45591 79.148 78.93 79.385 0 141 40 5 0 0 0 0.010717 2 48088 23.901 23.901 1 1.1834 1.1813 0 14631000 6743100 7888300 21771 1410 8232 8419 34160;34161 34161 LLEIQGK 7 1 0 Unmodified _LLEIQGK_ 0 0 0 Q9UKN8 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.7483 2 400.747453 799.480354 95997.69 0.018618 7.4613E-06 1.8276 0.0007324 1.8462 0.00073986 400.747581624717 404.754803014221 42.405 0.48201 42.405 42.178 42.66 -3.8147E-06 128 37 5 0 0 0 0.030596 1 22470 68.485 8.1907 1 0.9428 0.92803 0 24037000 10951000 13086000 21772 2107 8233 8420 34162 34162 LLEIQGK 7 1 0 Unmodified _LLEIQGK_ 0 0 0 Q9UKN8 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.747 2 400.747453 799.480354 95912.38 0.39417 0.00015796 0.4235 0.00016972 0.81767 0.00032768 400.747410587017 404.754830311606 41.077 0.30797 41.077 40.899 41.207 0 78 25 5 0 0 0 0.027041 1 22013 86.086 10.776 1 0.83113 0.84823 0 31283000 16404000 14879000 21773 2107 8233 8420 34163 34163 LLEIQTEK 8 1 0 Unmodified _LLEIQTEK_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5;H0Y9E6 B3KVZ3 B3KVZ3 CENPH Centromere protein H MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.2812 2 487.281857 972.549162 85815.78 0.13872 6.7596E-05 -0.69082 -0.00033663 -0.5521 -0.00026903 487.281359641173 491.288654158387 49.398 0.43121 49.398 49.095 49.526 0 131 38 4 0 0 0 0.022432 1 27687 57.177 30.215 1 0.63639 0.6694 0 19724000 13187000 6537600 21774 585 8234 8421 34164 34164 LLELADIDPTLRPR 14 0 2 Unmodified _LLELADIDPTLRPR_ 0 0 1 E5KTM5;Q8WVM0;A8K0B9 E5KTM5 E5KTM5 TFB1M Dimethyladenosine transferase 1, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.9865 3 541.313912 1620.91991 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.95 1 105.95 105.45 106.45 -7.6294E-06 0 0 0 0.020794 1 65713 41.644 15.997 1 21775 1210 8235 8422 34165 34165 LLELADIDPTLRPR 14 0 2 Unmodified _LLELADIDPTLRPR_ 0 0 1 E5KTM5;Q8WVM0;A8K0B9 E5KTM5 E5KTM5 TFB1M Dimethyladenosine transferase 1, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.3145 3 541.313912 1620.91991 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.21 1 105.21 104.71 105.71 7.6294E-06 0 0 0 0.0013745 1 66777 60.448 36.567 1 21776 1210 8235 8422 34166 34166 LLELEQDASSAK 12 1 0 Unmodified _LLELEQDASSAK_ 0 0 0 A8K273;B2RTX8;Q7Z5K2;Q8WVX6 A8K273 A8K273 WAPAL Wings apart-like protein homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.3483 2 652.340632 1302.66671 NaN NaN NaN -0.14469 -9.4387E-05 NaN NaN NaN NaN 59.989 0.23398 59.989 59.886 60.12 -3.8147E-06 0 0 0 0.00019656 1 34226 91.549 62.076 1 NaN NaN 0 4514000 0 4514000 21777 708 8236 8423 34167 34167 LLELGPKPEVAQQTR 15 1 1 Unmodified _LLELGPKPEVAQQTR_ 0 0 1 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.3217 3 560.321066 1677.94137 80857.45 0.49099 0.00027511 0.17005 9.5282E-05 0.66104 0.00037039 560.32111422554 566.32876427768 64.444 0.69328 64.444 64.003 64.697 0 277 61 6 0 0 0 0.00010186 2 36959 65.225 35.735 1 1.3775 1.6128 0 32284000 12919000 19365000 21778 1607 8237 8424 34168;34169 34169 LLELGPKPEVAQQTR 15 1 1 Unmodified _LLELGPKPEVAQQTR_ 0 0 1 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.6636 3 560.321066 1677.94137 80331.1 0.52402 0.00029362 0.15975 8.9514E-05 0.68377 0.00038313 560.655273566006 566.32862283126 62.545 0.62551 62.545 62.308 62.934 -3.8147E-06 276 57 8 0 0 0 3.7183E-06 1 36619 94.461 64.48 1 1.5197 1.7644 0 37669000 12191000 25478000 21779 1607 8237 8424 34170 34170 LLELQELVLR 10 0 1 Unmodified _LLELQELVLR_ 0 0 0 Q08379;Q5HYE0;A0A087WYC0;Q5PXD5 Q08379 Q08379 GOLGA2;DKFZp686K0319 Golgin subfamily A member 2 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.3839 2 613.379363 1224.74417 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.89 1 131.89 131.39 132.39 0 0 0 0 0.016751 1 80134 55.064 30.17 1 21780 1692 8238 8425 34171 34171 LLELTSSYSPDVSDYK 16 1 0 Unmodified _LLELTSSYSPDVSDYK_ 0 0 0 P38432 P38432 P38432 COIL Coilin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 912.9548 2 908.946189 1815.87783 NaN NaN NaN -0.12643 -0.00011491 NaN NaN NaN NaN 110.33 0.46678 110.33 110.17 110.64 0 0 0 0 0.01474 1 63717 42.809 36.706 1 NaN NaN 0 1721100 0 1721100 21781 1552 8239 8426 34172 34172 LLELTSSYSPDVSDYK 16 1 0 Unmodified _LLELTSSYSPDVSDYK_ 0 0 0 P38432 P38432 P38432 COIL Coilin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 913.4582 2 908.946189 1815.87783 NaN NaN NaN 0.0037258 3.3866E-06 NaN NaN NaN NaN 110.29 0.44334 110.29 110.08 110.53 0 0 0 0 0.0028077 1 62836 58.674 50.369 1 NaN NaN 0 1257200 0 1257200 21782 1552 8239 8426 34173 34173 LLENPTINHQK 11 1 0 Unmodified _LLENPTINHQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.8597 2 653.859326 1305.7041 75851.57 0.57914 0.00037867 -0.087122 -5.6965E-05 0.49201 0.00032171 654.361155805375 657.866193893647 29.309 0.49652 29.309 29.141 29.638 0 115 38 7 0 0 0 1.8459E-05 2 14132 105.52 105.52 1 1.1581 1.2509 0 35050000 18476000 16574000 21783 908 8240 8427 34174;34175 34174 LLENPTINHQK 11 1 0 Unmodified _LLENPTINHQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.9132 3 436.241976 1305.7041 89582.38 -0.073238 -3.1949E-05 -0.26245 -0.00011449 -0.33569 -0.00014644 436.576429531314 438.913458002891 29.345 1.2652 29.345 28.924 30.189 0 319 97 7 0 0 0 0.0086195 1 14262 39.917 39.917 1 1.0972 1.2391 0 80984000 26405000 54579000 21784 908 8240 8427 34176 34176 LLENPTINHQK 11 1 0 Unmodified _LLENPTINHQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.2433 3 436.241976 1305.7041 NaN NaN NaN 0.52294 0.00022813 NaN NaN NaN NaN 29.734 0.50191 29.734 29.65 30.152 0 0 0 0 0.011092 1 14565 34.193 28.007 1 NaN NaN 0 14125000 14125000 0 21785 908 8240 8427 34177 34177 LLENPTINHQK 11 1 0 Unmodified _LLENPTINHQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.8595 2 653.859326 1305.7041 74813.29 0.43742 0.00028601 -0.23403 -0.00015302 0.2034 0.00013299 653.859234302174 657.866023103052 29.059 0.38568 29.059 28.819 29.205 1.9073E-06 131 29 7 0 0 0 1.7367E-52 3 13881 206.78 206.78 1 0.8762 0.9805 0 53824000 32712000 21112000 21786 908 8240 8427 34178;34179;34180 34180 LLENPTINHQK 11 1 0 Unmodified _LLENPTINHQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 438.9133 3 436.241976 1305.7041 92345.55 -0.1181 -5.1519E-05 -0.070725 -3.0853E-05 -0.18882 -8.2373E-05 436.242039643532 438.913307835116 29.045 0.50261 29.045 28.768 29.271 0 219 39 7 0 0 0 5.9619E-06 1 13880 105.17 105.17 1 0.9118 1.0358 0 142910000 76808000 66105000 21787 908 8240 8427 34181 34181 LLENPTINHQK 11 1 0 Unmodified _LLENPTINHQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 438.913 3 436.241976 1305.7041 91930.98 -0.064965 -2.834E-05 0.091751 4.0026E-05 0.026787 1.1685E-05 436.242041686517 438.913265654155 33.581 1.5625 33.581 32.815 34.378 0 453 129 5 0 0 0 0.043623 1 14517 23.226 23.226 1 1.4649 1.1708 0 8993600 3516900 5476700 21788 908 8240 8427 34182 34182 LLENPTINHQK 11 1 0 Unmodified _LLENPTINHQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.8674 2 653.859326 1305.7041 78191.95 0.70815 0.00046303 -0.15112 -9.8813E-05 0.55703 0.00036422 653.858870363145 657.866385992972 33.392 0.7002 33.392 33.021 33.721 0 160 59 4 0 0 0 0.0069045 1 14636 56.432 56.432 1 1.5009 1.1902 0 4616600 1899700 2716900 21789 908 8240 8427 34183 34183 LLENPTINHQK 11 1 0 Unmodified _LLENPTINHQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.8599 2 653.859326 1305.7041 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.972 1 33.972 33.472 34.472 0 0 0 0 0.039382 1 14958 44.753 25.973 1 21790 908 8240 8427 34184 34184 LLENPTINHQK 11 1 0 Unmodified _LLENPTINHQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.309 2 653.859326 1305.7041 78191.95 0.85941 0.00056193 -0.15187 -9.9305E-05 0.70753 0.00046263 653.858929466581 657.866197678004 33.699 0.40611 33.699 33.564 33.97 0 86 34 4 0 0 0 0.024459 1 14890 72.325 72.325 1 1.5874 1.2583 0 4223200 1490500 2732700 21791 908 8240 8427 34185 34185 LLENPTINHQK 11 1 0 Unmodified _LLENPTINHQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.8669 2 653.859326 1305.7041 78020.34 0.51546 0.00033704 -0.11943 -7.8091E-05 0.39603 0.00025895 653.858996094172 657.866316969591 33.493 1.0125 33.493 33.225 34.237 0 276 87 5 0 0 0 5.0368E-05 2 14253 93.649 93.649 1 1.5268 1.2494 0 4854600 2630900 2223700 21792 908 8240 8427 34186;34187 34187 LLENPTINHQK 11 1 0 Unmodified _LLENPTINHQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 438.9131 3 436.241976 1305.7041 92962.3 -0.13008 -5.6747E-05 0.091155 3.9765E-05 -0.038927 -1.6982E-05 436.242046375381 438.913269126557 33.518 1.3091 33.518 33.158 34.467 0 398 110 7 0 0 0 0.050861 1 14538 21.671 21.671 1 1.404 1.1581 0 11081000 4222400 6858800 21793 908 8240 8427 34188 34188 LLENSTLNSK 10 1 0 Unmodified _LLENSTLNSK_ 0 0 0 B3KMX7;Q498Y2;H0YLB7;H0YKU8;Q6JHV3;H0YMI4;Q9Y6I4;H0YL81;H0YLG0;B4DV65 B3KMX7 B3KMX7 USP3 Ubiquitinyl hydrolase 1;Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.8054 2 559.806228 1117.5979 85473.97 0.30984 0.00017345 -0.26072 -0.00014595 0.049126 2.7501E-05 559.805837650507 563.813281882629 41.172 0.36393 41.172 41.037 41.401 0 83 30 4 0 0 0 0.031518 1 18560 42.19 42.19 1 1.3399 1.1832 0 902640 360000 542640 21794 910 8241 8428 34189 34189 LLEPFEVR 8 0 1 Unmodified _LLEPFEVR_ 0 0 0 Q8WUY1 Q8WUY1 Q8WUY1 THEM6 Protein THEM6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.7882 2 501.784567 1001.55458 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.737 1 87.737 87.237 88.237 0 0 0 0 0.0045404 1 54091 89.752 23.07 1 21795 1941 8242 8429 34190 34190 LLEPVDHGK 9 1 0 Unmodified _LLEPVDHGK_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.2874 2 504.279649 1006.54475 86371.41 0.16673 8.4081E-05 -0.47379 -0.00023892 -0.30705 -0.00015484 504.279700692078 508.285819767364 25.669 0.41869 25.669 25.486 25.905 0 70 23 6 0 0 0 0.010363 1 11241 59.35 41.964 1 2.174 2.1295 0 21877000 8824900 13052000 21796 511 8243 8430 34191 34191 LLEPVDHGK 9 1 0 Unmodified _LLEPVDHGK_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.279 2 504.279649 1006.54475 84152.41 0.10778 5.4349E-05 -0.66898 -0.00033736 -0.56121 -0.00028301 504.278709411204 508.286898122568 25.296 0.37942 25.296 25.062 25.441 1.9073E-06 50 12 8 0 0 0 0.0018407 2 10933 80.165 70.091 1 0.57334 0.58257 0 30077000 18396000 11681000 21797 511 8243 8430 34192;34193 34193 LLEPVDHGK 9 1 0 Unmodified _LLEPVDHGK_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 339.1935 3 336.522192 1006.54475 NaN NaN NaN 0.077439 2.606E-05 NaN NaN NaN NaN 25.294 0.2679 25.294 25.106 25.374 0 0 0 0 0.025144 1 10958 40.058 25.385 1 NaN NaN 0 9849000 0 9849000 21798 511 8243 8430 34194 34194 LLEPVLLLGK 10 1 0 Unmodified _LLEPVLLLGK_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76;Q6IPX4 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.8699 2 547.862818 1093.71108 81334.28 0.71149 0.0003898 -0.20796 -0.00011393 0.50353 0.00027586 547.862827100868 551.869696020359 117.7 1.8644 117.7 117.29 119.16 0 604 114 10 0 0 0 4.6077E-09 4 75749 124.98 93.049 1 1.0527 1.2514 0 573980000 280820000 293160000 21799 1636 8244 8431 34195;34196;34197;34198 34197 LLEPVLLLGK 10 1 0 Unmodified _LLEPVLLLGK_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76;Q6IPX4 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.8706 2 547.862818 1093.71108 NaN NaN NaN 0.13557 7.4272E-05 NaN NaN NaN NaN 118.87 0.57159 118.87 118.55 119.12 0 0 0 0 2.3553E-05 1 76368 103.56 57.845 1 NaN NaN 0 4101400 0 4101400 21800 1636 8244 8431 34199 34199 LLEPVLLLGK 10 1 0 Unmodified _LLEPVLLLGK_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76;Q6IPX4 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.8708 2 547.862818 1093.71108 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.67 1 119.67 119.17 120.17 -7.6294E-06 0 0 0 0.0074203 1 77031 60.91 30.725 1 21801 1636 8244 8431 34200 34200 LLEPVLLLGK 10 1 0 Unmodified _LLEPVLLLGK_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76;Q6IPX4 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.87 2 547.862818 1093.71108 81346.84 0.58852 0.00032243 -0.17841 -9.7742E-05 0.41012 0.00022469 547.862916449704 551.869706770448 117.12 1.8972 117.12 116.69 118.58 0 653 119 10 0 0 0 2.4394E-09 5 77085 127.56 93.768 1 1.0404 1.2295 0 1386900000 681240000 705630000 21802 1636 8244 8431 34201;34202;34203;34204;34205 34203 LLEPVLLLGK 10 1 0 Unmodified _LLEPVLLLGK_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76;Q6IPX4 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.8624 2 547.862818 1093.71108 81517.24 0.61189 0.00033523 0.035985 1.9715E-05 0.64788 0.00035495 547.862871934968 551.869825859327 129.68 1.7779 129.68 129.3 131.08 0 450 82 10 0 0 0 5.7705E-08 4 78323 114.28 80.485 1 0.88229 0.76369 0 117700000 63271000 54433000 21803 1636 8244 8431 34206;34207;34208;34209 34206 LLEPVLLLGK 10 1 0 Unmodified _LLEPVLLLGK_ 0 0 0 P62249;M0R210;M0R3H0;A0A087WZ27;M0R1M5;M0QX76;Q6IPX4 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.8699 2 547.862818 1093.71108 81288.04 0.89971 0.00049292 -0.1331 -7.2922E-05 0.76661 0.00042 547.862771970414 551.86971381026 129.39 2.135 129.39 129.03 131.16 0 418 90 10 0 0 0 0.00039656 3 77195 87.639 56.011 1 0.90048 0.76927 0 105520000 56820000 48698000 21804 1636 8244 8431 34210;34211;34212 34210 LLEQALVIEEQLR 13 0 1 Unmodified _LLEQALVIEEQLR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;Q6ZU36;I3L229;H7C3H7;H7C0J3;Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 F5GWX5;Q12873 F5GWX5 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.449 2 777.448505 1552.88246 69761.56 0.9565 0.00074363 0.31131 0.00024203 1.2678 0.00098566 777.448527929087 782.452629854354 114.98 0.76482 114.98 114.63 115.39 0 318 49 11 0 0 0 6.4036E-09 2 72926 118.77 111.64 1 0.69981 0.78402 0 90200000 54168000 36032000 21805 515;1701 8245 8432 34213;34214 34214 LLEQALVIEEQLR 13 0 1 Unmodified _LLEQALVIEEQLR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;Q6ZU36;I3L229;H7C3H7;H7C0J3;Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 F5GWX5;Q12873 F5GWX5 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.4501 2 777.448505 1552.88246 69585.84 0.84357 0.00065583 -0.037751 -2.9349E-05 0.80582 0.00062648 777.448297113957 782.452445892303 114.38 0.67819 114.38 114.08 114.76 0 297 45 9 0 0 0 1.7286E-13 2 74297 130.56 120.61 1 0.71287 0.82562 0 57430000 32693000 24737000 21806 515;1701 8245 8432 34215;34216 34216 LLEQALVIEEQLR 13 0 1 Unmodified _LLEQALVIEEQLR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;Q6ZU36;I3L229;H7C3H7;H7C0J3;Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 F5GWX5;Q12873 F5GWX5 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 782.4525 2 777.448505 1552.88246 68801.41 1.0115 0.00078636 0.056315 4.3782E-05 1.0678 0.00083014 777.94983456057 782.452579522279 126.29 0.86343 126.29 126.1 126.96 0 174 31 8 0 0 0 0.00013111 2 75914 73.848 73.848 1 1.9376 1.5922 0 17485000 5735700 11750000 21807 515;1701 8245 8432 34217;34218 34217 LLEQALVIEEQLR 13 0 1 Unmodified _LLEQALVIEEQLR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;Q6ZU36;I3L229;H7C3H7;H7C0J3;Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 F5GWX5;Q12873 F5GWX5 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 782.4531 2 777.448505 1552.88246 69357.38 0.69243 0.00053833 0.042256 3.2852E-05 0.73469 0.00057118 777.448321621362 782.452605009927 126.24 0.88258 126.24 125.92 126.81 0 198 37 8 0 0 0 0.00015341 2 74866 85.288 85.288 1 1.8095 1.5426 0 19811000 7461600 12350000 21808 515;1701 8245 8432 34219;34220 34219 LLEQALVIEEQLRR 14 0 2 Unmodified _LLEQALVIEEQLRR_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;Q6ZU36;I3L229;H7C3H7;H7C0J3;Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 F5GWX5;Q12873 F5GWX5 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.3403 3 570.668466 1708.98357 79833.11 0.34069 0.00019442 0.072677 4.1474E-05 0.41337 0.00023589 571.003024097305 577.340656030406 116.94 0.53803 116.94 116.66 117.2 0 83 20 6 0 0 0 0.00049234 2 68839 49.929 49.929 1 2.0601 1.7585 0 6660200 2135800 4524400 21809 515;1701 8246 8433 34221;34222 34222 LLEQGLR 7 0 1 Unmodified _LLEQGLR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.755 2 414.750527 827.486502 93767.37 0.2381 9.8754E-05 -0.10582 -4.3889E-05 0.13229 5.4866E-05 414.750171725551 419.754666665122 40.672 0.45404 40.672 40.46 40.914 0 132 40 4 0 0 0 0.032919 1 21351 64.776 0 1 1.4489 1.4792 0 26731000 9657500 17074000 21810 587 8247 8434 34223 34223 LLEQQELR 8 0 1 Unmodified _LLEQQELR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.7953 2 514.790381 1027.56621 NaN NaN NaN 0.003005 1.5469E-06 NaN NaN NaN NaN 42.031 0.56577 42.031 41.774 42.339 0 0 0 0 1.1234E-08 1 22125 139.28 67.141 1 NaN NaN 0 87957000 0 87957000 21811 2000 8248 8435 34224 34224 LLEQQELR 8 0 1 Unmodified _LLEQQELR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.79 2 514.790381 1027.56621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.953 1 41.953 41.453 42.453 0 0 0 0 0.00019967 1 22196 114.6 23.561 1 21812 2000 8248 8435 34225 34225 LLEQQELR 8 0 1 Unmodified _LLEQQELR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7937 2 514.790381 1027.56621 NaN NaN NaN -0.29721 -0.000153 NaN NaN NaN NaN 41.061 0.8447 41.061 40.568 41.412 -3.8147E-06 0 0 0 3.6483E-05 1 21753 124.83 65.853 1 NaN NaN 0 30616000 0 30616000 21813 2000 8248 8435 34226 34226 LLEQQELR 8 0 1 Unmodified _LLEQQELR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.7901 2 514.790381 1027.56621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.87 1 40.87 40.37 41.37 -3.8147E-06 0 0 0 5.6238E-05 1 21905 127.12 32.455 1 21814 2000 8248 8435 34227 34227 LLEQQELR 8 0 1 Unmodified _LLEQQELR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.7904 2 514.790381 1027.56621 83186.67 0.16536 8.5126E-05 0.069511 3.5783E-05 0.23487 0.00012091 514.790419769585 519.794356062708 48.167 1.0879 48.167 47.61 48.698 0 353 77 6 0 0 0 0.0010963 2 23524 112.17 43.75 1 1.3881 1.1368 0 13018000 5167600 7850400 21815 2000 8248 8435 34228;34229 34229 LLEQQELR 8 0 1 Unmodified _LLEQQELR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.7903 2 514.790381 1027.56621 82579.9 0.0092991 4.7871E-06 0.25581 0.00013169 0.26511 0.00013648 514.790469504226 519.794477499281 48.503 1.0936 48.503 47.927 49.021 0 402 92 6 0 0 0 0.0010963 2 23042 112.17 53.19 1 1.4736 1.1939 0 11846000 5073400 6772800 21816 2000 8248 8435 34230;34231 34231 LLESFETMASQTNLVDLDLGGK 22 1 0 Oxidation (M) _LLESFETM(ox)ASQTNLVDLDLGGK_ LLESFETM(1)ASQTNLVDLDLGGK LLESFETM(98.69)ASQTNLVDLDLGGK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1199.0983 2 1199.09633 2396.17811 NaN NaN NaN 0.21096 0.00025296 NaN NaN NaN NaN 118.97 0.50926 118.97 118.61 119.12 0 0 0 0 7.6046E-19 1 76209 98.694 86.778 1 NaN NaN 0 35927000 35927000 0 21817 908 8249 8436 34232 34232 740 LLESFETMASQTNLVDLDLGGK 22 1 0 Oxidation (M) _LLESFETM(ox)ASQTNLVDLDLGGK_ LLESFETM(1)ASQTNLVDLDLGGK LLESFETM(79.81)ASQTNLVDLDLGGK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1199.0958 2 1199.09633 2396.17811 NaN NaN NaN 0.60668 0.00072747 NaN NaN NaN NaN 118.43 0.64601 118.43 118.18 118.83 0 0 0 0 2.7115E-10 1 77797 79.81 67.895 1 NaN NaN 0 27445000 27445000 0 21818 908 8249 8436 34233 34233 740 LLESLDQLELR 11 0 1 Unmodified _LLESLDQLELR_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.8788 2 664.874642 1327.73473 74899.97 0.99831 0.00066375 -0.029503 -1.9616E-05 0.96881 0.00064414 664.874405169411 669.878761455801 108.38 0.90686 108.38 108.08 108.98 0 298 64 7 0 0 0 1.17E-16 2 67590 152.97 71.382 1 1.1723 1.3364 0 118660000 53857000 64804000 21819 900 8250 8437 34234;34235 34235 LLESLDQLELR 11 0 1 Unmodified _LLESLDQLELR_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.8791 2 664.874642 1327.73473 74098.88 0.78602 0.0005226 0.45196 0.0003005 1.238 0.0008231 664.874491519835 669.878749890061 107.82 0.80891 107.82 107.52 108.33 0 324 59 8 0 0 0 1.4125E-16 2 68749 150.85 76.389 1 1.1664 1.3401 0 77835000 34802000 43033000 21820 900 8250 8437 34236;34237 34236 LLESLDQLELR 11 0 1 Unmodified _LLESLDQLELR_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.8798 2 664.874642 1327.73473 75332.77 0.91918 0.00061114 -0.19022 -0.00012647 0.72896 0.00048467 664.874248707463 669.878835087937 119.52 0.76588 119.52 119.25 120.02 7.6294E-06 90 34 6 0 0 0 0.0025884 2 70821 61.353 34.239 1 0.93429 0.76296 0 15714000 8538300 7176000 21821 900 8250 8437 34238;34239 34239 LLESLDQLELR 11 0 1 Unmodified _LLESLDQLELR_ 0 0 0 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.8793 2 664.874642 1327.73473 75372.66 0.62285 0.00041412 0.58654 0.00038998 1.2094 0.00080409 664.874415289859 669.878947717785 119.33 0.55216 119.33 119.09 119.64 0 82 24 6 0 0 0 0.00048456 2 69756 74.841 37.333 1 0.87026 0.70728 0 12273000 5879900 6393400 21822 900 8250 8437 34240;34241 34240 LLETCSIALVGK 12 1 0 Unmodified _LLETCSIALVGK_ 0 0 0 P17812;B4E1E0;B4DMB5 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.3763 2 652.368138 1302.72172 NaN NaN NaN 0.187 0.00012199 NaN NaN NaN NaN 90.016 0.40463 90.016 89.723 90.127 0 0 0 0 0.0073952 1 54371 58.592 28.783 1 NaN NaN 0 10755000 0 10755000 21823 1494 8251 8438 34242 34242 LLETCSIALVGK 12 1 0 Unmodified _LLETCSIALVGK_ 0 0 0 P17812;B4E1E0;B4DMB5 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.8771 2 652.368138 1302.72172 76823.08 0.86753 0.00056595 -0.19423 -0.00012671 0.6733 0.00043924 652.36799335671 656.374977966357 89.074 0.36078 89.074 88.858 89.219 7.6294E-06 71 31 4 0 0 0 0.00067627 1 54935 81.338 81.338 1 1.8578 1.9243 0 18713000 8273800 10439000 21824 1494 8251 8438 34243 34243 LLETIHWR 8 0 1 Unmodified _LLETIHWR_ 0 0 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 356.5381 3 356.538064 1066.59236 103576 0.26331 9.3881E-05 -0.33528 -0.00011954 -0.071971 -2.566E-05 356.537936228787 359.874087986958 70.675 0.72499 70.675 70.424 71.149 0 116 58 4 0 0 0 0.018466 1 41300 35.295 30.075 1 0.46875 0.48773 0 5348900 3530500 1818500 21825 681 8252 8439 34244 34244 LLETTEEDK 9 1 0 Unmodified _LLETTEEDK_ 0 0 0 Q7L0Y3;C9JVB6 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.27 2 539.269144 1076.52373 84250.91 0.49951 0.00026937 0.19956 0.00010762 0.69908 0.00037699 539.26948000998 543.275919757032 26.621 0.3363 26.621 26.387 26.723 -1.9073E-06 71 18 5 0 0 0 0.041466 1 12025 41.448 12.299 1 1.5997 1.675 0 15157000 6513500 8643800 21826 1871 8253 8440 34245 34245 LLETTEEDK 9 1 0 Unmodified _LLETTEEDK_ 0 0 0 Q7L0Y3;C9JVB6 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.2766 2 539.269144 1076.52373 84087.67 0.5853 0.00031563 0.58129 0.00031347 1.1666 0.0006291 539.269733507211 543.276146580819 26.2 0.40529 26.2 26.063 26.468 0 61 16 5 0 0 0 0.0011742 2 11656 88.948 43.23 1 1.6774 1.7882 0 20856000 8213300 12643000 21827 1871 8253 8440 34246;34247 34246 LLETYLILVK 10 1 0 Unmodified _LLETYLILVK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.8814 2 602.881207 1203.74786 80985.87 1.3333 0.00080379 -0.13668 -8.2402E-05 1.1966 0.00072139 602.880978136929 606.888271559677 118.48 0.44562 118.48 118.3 118.74 0 77 25 4 0 0 0 1.4912E-05 2 76017 101.54 101.54 1 1.1334 1.1436 0 5485400 2615500 2869800 21828 1412 8254 8441 34248;34249 34248 LLETYLILVK 10 1 0 Unmodified _LLETYLILVK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.8888 2 602.881207 1203.74786 79511.84 0.81695 0.00049252 0.27593 0.00016635 1.0929 0.00065887 602.881144009369 606.888531292523 117.95 0.41853 117.95 117.8 118.22 0 92 28 4 0 0 0 1.0311E-09 2 77486 133.58 133.58 1 1.2284 1.237 0 7176900 2847700 4329300 21829 1412 8254 8441 34250;34251 34251 LLETYLILVK 10 1 0 Unmodified _LLETYLILVK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.8889 2 602.881207 1203.74786 79037.21 0.59432 0.00035831 0.18107 0.00010916 0.77539 0.00046747 602.881103003472 606.888368125048 130.53 0.49075 130.53 130.35 130.84 0 77 24 4 0 0 0 0.017404 2 79082 47.869 47.869 1 1.8047 1.5059 0 1297400 613120 684230 21830 1412 8254 8441 34252;34253 34252 LLETYLILVK 10 1 0 Unmodified _LLETYLILVK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.8825 2 602.881207 1203.74786 80312.68 0.97751 0.00058932 0.36922 0.0002226 1.3467 0.00081192 602.881177864318 606.888535667879 130.29 0.38904 130.29 130.13 130.52 0 44 16 4 0 0 0 0.018136 2 78026 47.574 47.574 1 2.0168 1.6887 0 1517100 458270 1058800 21831 1412 8254 8441 34254;34255 34255 LLEVDLK 7 1 0 Unmodified _LLEVDLK_ 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3;B5BU15 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6;SFRS6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.2617 2 415.255111 828.49567 96492.93 0.029428 1.222E-05 0.39953 0.00016591 0.42896 0.00017813 415.255216678901 419.262064193395 73.415 0.79002 73.415 73.228 74.018 0 296 73 6 0 0 0 0.028834 1 42993 71.296 0 1 1.3537 1.5216 0 70108000 32983000 37125000 21832 748 8255 8442 34256 34256 LLEVDLK 7 1 0 Unmodified _LLEVDLK_ 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3;B5BU15 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6;SFRS6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 419.2622 2 415.255111 828.49567 96482.23 -0.27124 -0.00011263 0.53481 0.00022208 0.26357 0.00010945 415.255143548397 419.26227374824 83.812 0.61453 83.812 83.623 84.238 0 130 50 5 0 0 0 0.041494 2 45758 58.981 0 1 0.90642 0.72583 0 8557800 4333600 4224200 21833 748 8255 8442 34257;34258 34258 LLEVDLK 7 1 0 Unmodified _LLEVDLK_ 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3;B5BU15 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6;SFRS6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 419.262 2 415.255111 828.49567 94580.05 -0.11869 -4.9286E-05 0.39968 0.00016597 0.28099 0.00011668 415.255100578967 419.26221513292 83.916 0.58538 83.916 83.751 84.336 0 137 50 5 0 0 0 0.041494 1 45011 58.981 0 1 0.93238 0.75931 0 7375600 3708200 3667300 21834 748 8255 8442 34259 34259 LLEVQGSRPGK 11 1 1 Unmodified _LLEVQGSRPGK_ 0 0 1 P62136;E9PMD7 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.3542 2 592.343312 1182.67207 78675.66 0.61785 0.00036598 -0.37336 -0.00022116 0.24449 0.00014482 592.343137693547 601.354224903441 26.779 0.29399 26.779 26.599 26.893 0 85 19 6 0 0 0 6.8166E-05 1 12090 107.79 59.505 1 0.76242 0.90697 0 46475000 25966000 20508000 21835 1632 8256 8443 34260 34260 LLEVQGSRPGK 11 1 1 Unmodified _LLEVQGSRPGK_ 0 0 1 P62136;E9PMD7 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 395.2312 3 395.2313 1182.67207 94912.07 0.02873 1.1355E-05 0.085196 3.3672E-05 0.11393 4.5027E-05 395.231251272064 401.238824280687 26.76 0.41159 26.76 26.585 26.996 0 121 26 7 0 0 0 0.0011976 1 12101 61.344 35.226 1 0.82049 0.98469 0 60936000 33516000 27420000 21836 1632 8256 8443 34261 34261 LLEVQGSRPGK 11 1 1 Unmodified _LLEVQGSRPGK_ 0 0 1 P62136;E9PMD7 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3543 2 592.343312 1182.67207 78818.11 0.59161 0.00035044 -0.41321 -0.00024476 0.17841 0.00010568 592.343000220725 601.354249621672 26.209 0.40529 26.209 26.063 26.468 1.9073E-06 82 21 6 0 0 0 3.7218E-07 1 11698 114.4 66.118 1 0.86536 1.0096 0 46094000 22656000 23438000 21837 1632 8256 8443 34262 34262 LLEVQGSRPGK 11 1 1 Unmodified _LLEVQGSRPGK_ 0 0 1 P62136;E9PMD7 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.2388 3 395.2313 1182.67207 95933.45 0.14435 5.7053E-05 -0.01706 -6.7427E-06 0.12729 5.031E-05 395.231250492358 401.238760799182 26.214 0.53037 26.214 26.042 26.572 1.9073E-06 114 28 7 0 0 0 0.010763 1 11711 47.053 33.649 1 0.76097 0.89483 0 70580000 30645000 39935000 21838 1632 8256 8443 34263 34263 LLEVQGSRPGK 11 1 1 Unmodified _LLEVQGSRPGK_ 0 0 1 P62136;E9PMD7 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.3545 2 592.343312 1182.67207 79172.8 0.36664 0.00021718 0.22803 0.00013507 0.59467 0.00035225 592.343288701793 601.354585817905 29.83 0.39078 29.83 29.643 30.034 0 128 29 7 0 0 0 0.0014086 2 12216 90.15 49.799 1 1.1729 0.96497 0 5123900 2189300 2934600 21839 1632 8256 8443 34264;34265 34265 LLEVQGSRPGK 11 1 1 Unmodified _LLEVQGSRPGK_ 0 0 1 P62136;E9PMD7 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.3549 2 592.343312 1182.67207 78226.84 0.21266 0.00012597 0.27454 0.00016262 0.48719 0.00028859 592.343368796299 601.354713827846 29.859 0.38954 29.859 29.676 30.066 1.9073E-06 133 26 7 0 0 0 0.00084319 2 11729 94.692 53.663 1 1.3798 1.1602 0 4515000 1914600 2600400 21840 1632 8256 8443 34266;34267 34267 LLEVYDQLFK 10 1 0 Unmodified _LLEVYDQLFK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.35 2 634.350271 1266.68599 78285.22 0.81636 0.00051786 -0.034639 -2.1973E-05 0.78172 0.00049588 634.350081141806 638.357192009681 114.08 0.7218 114.08 113.77 114.5 -7.6294E-06 231 52 7 0 0 0 6.4846E-08 2 72254 112.84 112.84 1 1.3079 1.3337 0 14239000 6881000 7358400 21841 39 8257 8444 34268;34269 34268 LLEVYDQLFK 10 1 0 Unmodified _LLEVYDQLFK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.35 2 634.350271 1266.68599 77544.82 0.56925 0.0003611 0.024873 1.5778E-05 0.59412 0.00037688 634.350245259927 638.357208033216 113.52 0.75687 113.52 113.12 113.88 -7.6294E-06 195 53 6 0 0 0 4.0245E-06 2 73571 109.71 109.71 1 1.197 1.209 0 16338000 7823800 8514100 21842 39 8257 8444 34270;34271 34271 LLEVYDQLFK 10 1 0 Unmodified _LLEVYDQLFK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.3574 2 634.350271 1266.68599 78857.68 0.69156 0.00043869 -0.18907 -0.00011994 0.50249 0.00031876 634.350182312549 638.357149799848 125.05 0.65989 125.05 124.75 125.41 -7.6294E-06 92 27 5 0 0 0 0.0081748 2 75024 56.432 56.432 1 1.5314 1.2936 0 1965600 939330 1026300 21843 39 8257 8444 34272;34273 34273 LLEVYDQLFK 10 1 0 Unmodified _LLEVYDQLFK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.3578 2 634.350271 1266.68599 80085.84 0.78611 0.00049867 0.023867 1.514E-05 0.80997 0.00051381 634.350109410373 638.357127069721 124.92 0.66958 124.92 124.61 125.28 0 90 30 5 0 0 0 0.0091807 1 73964 55.064 55.064 1 1.4141 1.1103 0 2261100 980850 1280300 21844 39 8257 8444 34274 34274 LLEYLR 6 0 1 Unmodified _LLEYLR_ 0 0 0 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 403.7416 2 403.742171 805.469789 NaN NaN NaN 0.47625 0.00019228 NaN NaN NaN NaN 69.971 1.3058 69.971 69.294 70.6 0 0 0 0 0.053383 1 40699 103.41 48.872 1 NaN NaN 0 14504000 14504000 0 21845 1997 8258 8445 34275 34275 LLEYLR 6 0 1 Unmodified _LLEYLR_ 0 0 0 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 403.742 2 403.742171 805.469789 95245.87 0.082182 3.3181E-05 0.063214 2.5522E-05 0.1454 5.8703E-05 403.742079793492 408.746177650694 68.554 1.2053 68.554 68.056 69.261 0 273 99 4 0 0 0 0.029319 1 40763 128.89 39.438 1 0.91665 1.0043 0 31300000 13473000 17827000 21846 1997 8258 8445 34276 34276 LLFDETQGK 9 1 0 Unmodified _LLFDETQGK_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.778 2 525.776939 1049.53933 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.944 1 60.944 60.444 61.444 3.8147E-06 0 0 0 0.012839 1 34805 60.91 35.987 1 21847 684 8259 8446 34277 34277 LLFDETQGK 9 1 0 Unmodified _LLFDETQGK_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.2783 2 525.776939 1049.53933 83210.58 0.33009 0.00017355 0.14649 7.7021E-05 0.47658 0.00025057 525.776963394533 529.78398759173 60 0.5309 60 59.725 60.256 -3.8147E-06 143 38 5 0 0 0 0.0017345 3 34891 81.548 64.162 1 1.1769 1.2722 0 22543000 11065000 11478000 21848 684 8259 8446 34278;34279;34280 34279 LLFNDVQTLK 10 1 0 Unmodified _LLFNDVQTLK_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8427 2 595.842613 1189.67067 81012.73 1.1188 0.0006666 0.35662 0.00021249 1.4754 0.00087909 595.842527972324 599.849792574521 93.171 0.85689 93.171 92.754 93.61 -7.6294E-06 216 72 5 0 0 0 0.012313 1 56339 50.805 19.536 1 1.0594 1.0382 0 21197000 8810700 12386000 21849 1754 8260 8447 34281 34281 LLFPAVDDNLLK 12 1 0 Unmodified _LLFPAVDDNLLK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3901 2 679.389928 1356.7653 73980.3 0.77496 0.0005265 -0.058251 -3.9575E-05 0.71671 0.00048692 679.389853345657 683.396868441353 120.1 0.83542 120.1 119.74 120.57 0 339 57 9 0 0 0 8.1241E-05 2 77251 96.89 96.89 1 0.57686 0.65199 0 143370000 91410000 51956000 21850 1679 8261 8448 34282;34283 34282 LLFPAVDDNLLK 12 1 0 Unmodified _LLFPAVDDNLLK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3909 2 679.389928 1356.7653 74329.04 0.74769 0.00050797 0.096817 6.5776E-05 0.84451 0.00057375 679.39020298297 683.39676653888 119.6 1.0862 119.6 119.21 120.29 0 416 79 9 0 0 0 0.001682 2 78713 60.518 60.518 1 0.58708 0.6763 0 180080000 114540000 65538000 21851 1679 8261 8448 34284;34285 34284 LLFPAVDDNLLK 12 1 0 Unmodified _LLFPAVDDNLLK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 683.396 2 679.389928 1356.7653 73749.14 1.0433 0.00070881 -0.25493 -0.00017319 0.78838 0.00053562 679.389923709843 683.396681943904 132.31 1.1026 132.31 131.91 133.01 0 275 50 10 0 0 0 0.00022668 2 80394 84.17 84.17 1 1.0603 0.86737 0 34729000 16034000 18695000 21852 1679 8261 8448 34286;34287 34287 LLFPAVDDNLLK 12 1 0 Unmodified _LLFPAVDDNLLK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.3975 2 679.389928 1356.7653 73503.39 1.1488 0.00078048 -0.14546 -9.8827E-05 1.0033 0.00068165 679.389999008864 683.396768913057 132.08 1.0835 132.08 131.65 132.74 0 263 44 10 0 0 0 0.005246 1 79266 51.436 51.436 1 1.0745 0.90611 0 54627000 26035000 28593000 21853 1679 8261 8448 34288 34288 LLFSNTAAQK 10 1 0 Unmodified _LLFSNTAAQK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.813 2 546.806031 1091.59751 84691.27 0.34243 0.00018724 -0.0071763 -3.9241E-06 0.33525 0.00018332 546.805874558823 550.813131807578 52.855 0.38773 52.855 52.647 53.035 0 99 28 5 0 0 0 0.0003605 2 29432 88.819 74.304 1 0.83192 0.87685 0 16389000 8021900 8366800 21854 1990 8262 8449 34289;34290 34289 LLFSNTAAQK 10 1 0 Unmodified _LLFSNTAAQK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.813 2 546.806031 1091.59751 NaN NaN NaN -0.58839 -0.00032173 NaN NaN NaN NaN 51.428 0.26069 51.428 51.338 51.599 -3.8147E-06 0 0 0 0.0011309 1 29192 87.639 41.214 1 NaN NaN 0 5790200 0 5790200 21855 1990 8262 8449 34291 34291 LLFSSSAAFAK 11 1 0 Unmodified _LLFSSSAAFAK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.3234 2 571.316232 1140.61791 84335.65 0.50749 0.00028994 0.43347 0.00024765 0.94096 0.00053759 571.316185613682 575.323140167318 88.346 0.45085 88.346 88.181 88.632 0 105 34 5 0 0 0 0.00092259 2 53254 71.451 45.892 1 0.67776 0.6795 0 18694000 11815000 6879000 21856 1928 8263 8450 34292;34293 34292 LLFSSSAAFAK 11 1 0 Unmodified _LLFSSSAAFAK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.3161 2 571.316232 1140.61791 84360.68 0.67961 0.00038827 1.1001 0.00062852 1.7797 0.0010168 571.316952649154 575.323084341891 87.265 0.30175 87.265 87.116 87.417 0 89 25 5 0 0 0 0.0023522 2 53796 61.78 39.564 1 0.69141 0.73193 0 20253000 12032000 8220900 21857 1928 8263 8450 34294;34295 34295 LLFSSSAAFAK 11 1 0 Unmodified _LLFSSSAAFAK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.8187 2 571.316232 1140.61791 80343.69 0.32135 0.00018359 0.26224 0.00014982 0.58359 0.00033342 571.316403156169 575.323048460602 101 0.41089 101 100.81 101.22 0 82 27 5 0 0 0 0.0074524 1 57195 52.579 27.02 1 1.2251 0.96234 0 3955000 1907500 2047500 21858 1928 8263 8450 34296 34296 LLFSSSAAFAK 11 1 0 Unmodified _LLFSSSAAFAK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.3232 2 571.316232 1140.61791 80334.51 0.37995 0.00021707 -0.081884 -4.6782E-05 0.29807 0.00017029 571.316442533009 575.322768804153 100.8 0.37727 100.8 100.64 101.02 -7.6294E-06 95 28 5 0 0 0 0.01831 2 56183 44.863 22.777 1 1.053 0.8364 0 4024600 1825300 2199200 21859 1928 8263 8450 34297;34298 34298 LLFTMLEK 8 1 0 Oxidation (M) _LLFTM(ox)LEK_ LLFTM(1)LEK LLFTM(51.35)LEK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.7829 2 505.783179 1009.5518 85409.14 0.44318 0.00022415 0.20636 0.00010437 0.64953 0.00032852 505.783315772483 509.790251593969 85.778 0.66359 85.778 85.427 86.09 0 271 56 7 0 0 0 0.015185 2 51552 51.346 34.58 1 1.2764 1.3847 0 45332000 20436000 24896000 21860 908 8264 8451 34299;34300 34300 741 LLFTMLEK 8 1 0 Oxidation (M) _LLFTM(ox)LEK_ LLFTM(1)LEK LLFTM(41.45)LEK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.7899 2 505.783179 1009.5518 84734.58 0.30698 0.00015526 0.29387 0.00014863 0.60084 0.0003039 505.783423839448 509.790212443482 84.719 0.62581 84.719 84.343 84.969 0 273 52 7 0 0 0 0.02728 2 51864 41.448 31.441 1 1.212 1.3608 0 75572000 40142000 35430000 21861 908 8264 8451 34301;34302 34301 741 LLFTMLEK 8 1 0 Oxidation (M) _LLFTM(ox)LEK_ LLFTM(1)LEK LLFTM(53.17)LEK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.7907 2 505.783179 1009.5518 84321.75 0.5276 0.00026685 0.0044056 2.2283E-06 0.532 0.00026908 505.783208828484 509.790131297445 85.204 0.73019 85.204 84.933 85.664 0 231 60 6 0 0 0 0.013837 1 52417 53.166 36.39 1 1.3411 1.5064 0 74714000 32039000 42675000 21862 908 8264 8451 34303 34303 741 LLFTMLEK 8 1 0 Oxidation (M) _LLFTM(ox)LEK_ LLFTM(1)LEK LLFTM(47.08)LEK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.7905 2 505.783179 1009.5518 85799.82 0.4344 0.00021971 -0.15046 -7.6101E-05 0.28394 0.00014361 505.783110282875 509.790083699179 98.526 0.76614 98.526 98.169 98.936 -7.6294E-06 174 46 5 0 0 0 0.019792 2 55599 47.082 37.494 1 1.1053 0.85728 0 3487600 1697500 1790100 21863 908 8264 8451 34304;34305 34305 741 LLFTMLEK 8 1 0 Oxidation (M) _LLFTM(ox)LEK_ LLFTM(1)LEK LLFTM(46.43)LEK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.7888 2 505.783179 1009.5518 87949.9 0.29214 0.00014776 -0.28761 -0.00014547 0.0045282 2.2903E-06 505.783292770583 509.790136875023 97.651 0.72675 97.651 97.284 98.011 7.6294E-06 143 40 5 0 0 0 0.020664 1 54091 46.426 36.838 1 1.0273 0.80544 0 3327200 1670900 1656300 21864 908 8264 8451 34306 34306 741 LLFTMLEK 8 1 0 Unmodified _LLFTMLEK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.793 2 497.785721 993.55689 86446.13 0.11437 5.6934E-05 0.38586 0.00019207 0.50023 0.00024901 497.785913299049 501.7928533882 116.72 0.62102 116.72 116.45 117.07 7.6294E-06 91 24 6 0 0 0 0.031343 2 68580 51.346 40.555 1 1.8392 1.4585 0 4377700 1575100 2802600 21865 908 8264 8452 34307;34308 34307 LLFTMLEK 8 1 0 Unmodified _LLFTMLEK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.7929 2 497.785721 993.55689 87828.06 0.39027 0.00019427 0.2328 0.00011589 0.62307 0.00031016 497.785702256841 501.792788808497 116.44 0.75748 116.44 116.16 116.91 0 119 34 6 0 0 0 0.022631 2 67484 57.047 43.468 1 1.5211 1.2389 0 4586200 1942300 2643800 21866 908 8264 8452 34309;34310 34310 LLFWGGSYGGAGQPQLISR 19 0 1 Unmodified _LLFWGGSYGGAGQPQLISR_ 0 0 0 CON__Q3ZBS7 CON__Q3ZBS7 CON__Q3ZBS7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1004.5284 2 1004.02597 2006.0374 NaN NaN NaN 0.42003 0.00042172 NaN NaN NaN NaN 117.48 0.51618 117.48 117.26 117.78 -7.6294E-06 0 0 0 1.6991E-06 1 75110 76.262 68.718 1 NaN NaN 0 16067000 16067000 0 + 21867 1173 8265 8453 34311 34311 LLFWGGSYGGAGQPQLISR 19 0 1 Unmodified _LLFWGGSYGGAGQPQLISR_ 0 0 0 CON__Q3ZBS7 CON__Q3ZBS7 CON__Q3ZBS7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1004.5284 2 1004.02597 2006.0374 NaN NaN NaN 0.22741 0.00022832 NaN NaN NaN NaN 116.99 0.57394 116.99 116.77 117.34 0 0 0 0 3.2711E-17 1 76566 108.17 98.981 1 NaN NaN 0 20150000 20150000 0 + 21868 1173 8265 8453 34312 34312 LLFWGGSYGGAGQPQLISR 19 0 1 Unmodified _LLFWGGSYGGAGQPQLISR_ 0 0 0 CON__Q3ZBS7 CON__Q3ZBS7 CON__Q3ZBS7 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1004.5299 2 1004.02597 2006.0374 NaN NaN NaN 0.26459 0.00026565 NaN NaN NaN NaN 129.07 0.49307 129.07 128.84 129.34 0 0 0 0 5.352E-05 1 77957 66.246 60.401 1 NaN NaN 0 5462400 5462400 0 + 21869 1173 8265 8453 34313 34313 LLGAALPLLTK 11 1 0 Unmodified _LLGAALPLLTK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.3757 2 555.368267 1108.72198 82061.37 0.83964 0.00046631 -0.13218 -7.3407E-05 0.70746 0.0003929 555.368095539 559.375161401464 114.98 0.89819 114.98 114.57 115.47 0 306 58 8 0 0 0 0.00076687 3 72780 72.643 72.643 1 0.86164 0.97266 0 109180000 58970000 50215000 21870 1997 8266 8454 34314;34315;34316 34314 LLGAALPLLTK 11 1 0 Unmodified _LLGAALPLLTK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.8702 2 555.368267 1108.72198 81738.2 0.74671 0.0004147 -0.27594 -0.00015325 0.47077 0.00026145 555.368026068879 559.375076411119 114.26 0.77527 114.26 113.92 114.7 0 317 53 8 0 0 0 0.0051516 2 74078 56.729 54.941 1 0.92243 1.041 0 64379000 32129000 32249000 21871 1997 8266 8454 34317;34318 34317 LLGAALPLLTK 11 1 0 Unmodified _LLGAALPLLTK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.3683 2 555.368267 1108.72198 80746.6 0.77033 0.00042782 -0.13507 -7.5011E-05 0.63527 0.00035281 555.368143752098 559.375161656161 126.29 1.0185 126.29 126.04 127.06 0 191 39 9 0 0 0 0.00022163 2 75883 91.867 91.516 1 1.11 0.88576 0 20066000 8860100 11206000 21872 1997 8266 8454 34319;34320 34319 LLGAALPLLTK 11 1 0 Unmodified _LLGAALPLLTK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.3755 2 555.368267 1108.72198 81875.07 0.67195 0.00037318 -0.12248 -6.8021E-05 0.54947 0.00030516 555.368128492496 559.375181952013 126.11 0.89303 126.11 125.82 126.72 7.6294E-06 214 38 8 0 0 0 0.0063655 2 74755 54.539 54.539 1 1.049 0.84115 0 21921000 10622000 11299000 21873 1997 8266 8454 34321;34322 34321 LLGASELPIVTPALR 15 0 1 Unmodified _LLGASELPIVTPALR_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.9746 2 775.469241 1548.92393 69052.4 0.86718 0.00067247 -0.057734 -4.4771E-05 0.80944 0.0006277 775.469198020676 780.473299525741 119.7 0.67422 119.7 119.47 120.14 -7.6294E-06 283 45 9 0 0 0 3.3641E-10 2 76932 116.55 116.55 1 1.0921 1.2305 0 97960000 46228000 51731000 21874 769 8267 8455 34323;34324 34323 LLGASELPIVTPALR 15 0 1 Unmodified _LLGASELPIVTPALR_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.47 2 775.469241 1548.92393 68289.81 0.8759 0.00067923 -1.5994E-05 -1.2403E-08 0.87589 0.00067922 775.469232770661 780.473356328987 119.22 0.61637 119.22 118.94 119.55 7.6294E-06 283 42 10 0 0 0 1.5631E-15 2 78459 134.3 134.3 1 1.067 1.2188 0 149990000 72505000 77482000 21875 769 8267 8455 34325;34326 34326 LLGASELPIVTPALR 15 0 1 Unmodified _LLGASELPIVTPALR_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.4705 2 775.469241 1548.92393 68164.95 1.0374 0.0008045 -0.20608 -0.00015981 0.83136 0.0006447 775.469108387007 780.473187450394 132.03 0.89752 132.03 131.77 132.67 0 247 41 10 0 0 0 0.00072801 2 80109 51.286 51.286 1 0.58842 0.50078 0 35244000 21418000 13826000 21876 769 8267 8455 34327;34328 34327 LLGASELPIVTPALR 15 0 1 Unmodified _LLGASELPIVTPALR_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.9733 2 775.469241 1548.92393 69082.52 1.1486 0.00089072 0.20682 0.00016038 1.3554 0.0010511 775.469393290601 780.473529349955 131.86 0.76926 131.86 131.53 132.3 0 197 31 11 0 0 0 1.3719E-15 2 79047 134.75 134.75 1 0.57402 0.50083 0 54228000 34023000 20205000 21877 769 8267 8455 34329;34330 34329 LLGCQSIEK 9 1 0 Unmodified _LLGCQSIEK_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.2858 2 524.278792 1046.54303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.403 1 41.403 40.903 41.903 0 0 0 0 0.003648 1 21816 69.812 35.004 1 21878 1945 8268 8456 34331 34331 LLGCQSIEK 9 1 0 Unmodified _LLGCQSIEK_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.2872 2 524.278792 1046.54303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.33 1 40.33 39.83 40.83 0 0 0 0 0.036864 1 21512 50.805 21.428 1 21879 1945 8268 8456 34332 34332 LLGEEIEYLK 10 1 0 Unmodified _LLGEEIEYLK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.8357 2 603.834454 1205.65436 82190.8 0.82692 0.00049932 0.57498 0.00034719 1.4019 0.00084652 603.834932096098 607.841866356968 94.333 0.67651 94.333 94.048 94.725 0 152 55 5 0 0 0 0.0027721 1 58624 67.563 56.412 1 0.7204 0.73936 0 17754000 9141500 8612200 21880 1928 8269 8457 34333 34333 LLGEEIEYLK 10 1 0 Unmodified _LLGEEIEYLK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.8348 2 603.834454 1205.65436 78108.1 0.59033 0.00035646 0.39623 0.00023926 0.98657 0.00059572 603.834562105087 607.841460262213 108.27 0.54962 108.27 107.99 108.54 0 103 26 6 0 0 0 0.043564 1 61190 37.344 28.812 1 0.95085 0.74193 0 3457300 1658900 1798300 21881 1928 8269 8457 34334 34334 LLGEQYYK 8 1 0 Unmodified _LLGEQYYK_ 0 0 0 A0A024R582;J3KMZ8;Q92785;E9PN04 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.7704 2 507.26875 1012.52295 85995.26 0.43786 0.00022211 0.60166 0.0003052 1.0395 0.00052731 507.268123055987 511.778636196327 53.499 0.80935 53.499 53.022 53.831 -3.8147E-06 124 62 4 0 0 0 0.024045 1 30057 56.122 42.126 1 1.1659 1.1838 0 13606000 2963900 10643000 21882 174 8270 8458 34335 34335 LLGGFQETCSK 11 1 0 Unmodified _LLGGFQETCSK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.3057 2 620.305538 1238.59652 75180.05 0.63406 0.00039331 0.75112 0.00046592 1.3852 0.00085923 620.305816620221 624.313796038078 54.279 1.1624 54.279 53.352 54.515 -3.8147E-06 301 92 6 0 0 0 0.0011084 1 30236 70.028 65.577 1 0.84345 0.91464 0 44893000 22012000 22881000 21883 125 8271 8459 34336 34336 LLGGFQETCSK 11 1 0 Unmodified _LLGGFQETCSK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.3058 2 620.305538 1238.59652 75595.41 0.40316 0.00025008 0.14017 8.695E-05 0.54333 0.00033703 620.305828220555 624.312744845682 61.994 1.0006 61.994 61.667 62.667 0 411 79 6 0 0 0 0.00045777 2 31858 76.943 72.16 1 1.1694 0.92226 0 10829000 5269300 5559400 21884 125 8271 8459 34337;34338 34337 LLGGFQETCSK 11 1 0 Unmodified _LLGGFQETCSK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.3058 2 620.305538 1238.59652 75257.78 0.31629 0.00019619 0.32091 0.00019906 0.63719 0.00039525 620.30592212916 624.312889376938 62.631 1.339 62.631 61.979 63.318 3.8147E-06 423 104 6 0 0 0 0.0004486 2 31521 77.662 72.879 1 1.2082 0.98637 0 8007400 3678300 4329100 21885 125 8271 8459 34339;34340 34339 LLGGLAVR 8 0 1 Unmodified _LLGGLAVR_ 0 0 0 P23396;Q53G83;E9PL09;F2Z2S8;H0YCJ7;H0YF32;A7E2S3;Q9NQS8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.7631 2 399.763438 797.512323 95121.33 -0.13231 -5.2892E-05 0.23549 9.4139E-05 0.10318 4.1247E-05 399.763444437943 404.767564665609 69.59 1.569 69.59 69.018 70.587 0 603 137 7 0 0 0 0.0066106 1 40704 86.512 5.4124 1 1.1068 1.3037 0 237590000 119200000 118390000 21886 1511 8272 8460 34341 34341 LLGGLAVR 8 0 1 Unmodified _LLGGLAVR_ 0 0 0 P23396;Q53G83;E9PL09;F2Z2S8;H0YCJ7;H0YF32;A7E2S3;Q9NQS8 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 399.7635 2 399.763438 797.512323 95149.93 0.078835 3.1515E-05 0.051589 2.0624E-05 0.13042 5.2139E-05 399.763344333823 404.76746520878 79.116 1.3156 79.116 78.696 80.012 0 349 78 7 0 0 0 0.030997 1 42562 51.572 4.5271 1 0.95194 0.79012 0 20861000 9566700 11295000 21887 1511 8272 8460 34342 34342 LLGGVTIAQGGVLPNIQAVLLPK 23 1 0 Unmodified _LLGGVTIAQGGVLPNIQAVLLPK_ 0 0 0 Q8IUE6;Q96QV6;P16104 Q8IUE6;Q96QV6 Q96QV6 HIST2H2AB;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1135.9521 2 1136.19357 2270.37259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.55 1 133.55 133.05 134.05 0 0 0 0 0 1 87515 310.33 290.59 1 21888 1487;1890 8273 8461 34343 34343 LLGGVTIAQGGVLPNIQAVLLPK 23 1 0 Unmodified _LLGGVTIAQGGVLPNIQAVLLPK_ 0 0 0 Q8IUE6;Q96QV6;P16104 Q8IUE6;Q96QV6 Q96QV6 HIST2H2AB;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1140.2 2 1136.19357 2270.37259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 139 1 139 138.5 139.5 0 0 0 0 4.4537E-11 1 89708 88.552 85.99 1 21889 1487;1890 8273 8461 34344 34344 LLGGVTIAQGGVLPNIQAVLLPK 23 1 0 Unmodified _LLGGVTIAQGGVLPNIQAVLLPK_ 0 0 0 Q8IUE6;Q96QV6;P16104 Q8IUE6;Q96QV6 Q96QV6 HIST2H2AB;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1140.2009 2 1136.19357 2270.37259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 137.69 1 137.69 137.19 138.19 0 0 0 0 3.362E-09 1 91152 79.875 78.509 1 21890 1487;1890 8273 8461 34345 34345 LLGGVTIAQGGVLPNIQAVLLPK 23 1 0 Unmodified _LLGGVTIAQGGVLPNIQAVLLPK_ 0 0 0 Q8IUE6;Q96QV6;P16104 Q8IUE6;Q96QV6 Q96QV6 HIST2H2AB;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A type 1-A;Histone H2AX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1136.1932 2 1136.19357 2270.37259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 138.84 1 138.84 138.34 139.34 0 0 0 0 1.548E-05 1 91401 60.628 53.426 1 21891 1487;1890 8273 8461 34346 34346 LLGGVTIAQGGVLPNIQAVLLPK 23 1 0 Unmodified _LLGGVTIAQGGVLPNIQAVLLPK_ 0 0 0 Q8IUE6;Q96QV6;P16104 Q8IUE6;Q96QV6 Q96QV6 HIST2H2AB;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1140.2006 2 1136.19357 2270.37259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 140.43 1 140.43 139.93 140.93 0 0 0 0 1.6067E-06 1 91681 69.03 66.468 1 21892 1487;1890 8273 8461 34347 34347 LLGGVTIAQGGVLPNIQAVLLPK 23 1 0 Unmodified _LLGGVTIAQGGVLPNIQAVLLPK_ 0 0 0 Q8IUE6;Q96QV6;P16104 Q8IUE6;Q96QV6 Q96QV6 HIST2H2AB;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1140.1997 2 1136.19357 2270.37259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 141.19 1 141.19 140.69 141.69 0 0 0 0 0.026422 1 91845 32.275 32.275 1 21893 1487;1890 8273 8461 34348 34348 LLGGVTIAQGGVLPNIQAVLLPK 23 1 0 Unmodified _LLGGVTIAQGGVLPNIQAVLLPK_ 0 0 0 Q8IUE6;Q96QV6;P16104 Q8IUE6;Q96QV6 Q96QV6 HIST2H2AB;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A type 1-A;Histone H2AX MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1140.1997 2 1136.19357 2270.37259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 144.27 1 144.27 143.77 144.77 0 0 0 0 0.00094437 1 92567 49.929 45.038 1 21894 1487;1890 8273 8461 34349 34349 LLGGVTIAQGGVLPNIQAVLLPK 23 1 0 Unmodified _LLGGVTIAQGGVLPNIQAVLLPK_ 0 0 0 Q8IUE6;Q96QV6;P16104 Q8IUE6;Q96QV6 Q96QV6 HIST2H2AB;HIST1H2AA;H2AFX Histone H2A type 2-B;Histone H2A type 1-A;Histone H2AX MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1136.1959 2 1136.19357 2270.37259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 136.22 1 136.22 135.72 136.72 0 0 0 0 0.01098 1 82664 40.025 35.395 1 21895 1487;1890 8273 8461 34350 34350 LLGHEVEDVIIK 12 1 0 Unmodified _LLGHEVEDVIIK_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;A0A059XBJ1;A0A059XAL2;A0A059XAJ5;A0A059XG67;A0A059X4U2 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.2688 3 455.597649 1363.77112 94587.11 0.38309 0.00017454 -0.092636 -4.2205E-05 0.29046 0.00013233 455.932062648629 458.26891079121 80.029 0.60107 80.029 79.773 80.374 7.6294E-06 84 47 4 0 0 0 0.033806 2 48670 23.711 23.711 1 1.8754 1.9553 0 11013000 3751200 7261800 21896 231 8274 8462 34351;34352 34351 LLGHLVK 7 1 0 Unmodified _LLGHLVK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;H7BZ35 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 390.2603 2 390.260531 778.506509 100167.8 0.46094 0.00017988 -0.30074 -0.00011737 0.1602 6.2518E-05 390.26028523191 394.267534854462 34.73 0.41987 34.73 34.589 35.009 0 123 35 4 0 0 0 0.039723 1 17593 59.795 20.803 1 1.6048 1.6169 0 27928000 11347000 16581000 21897 610 8275 8463 34353 34353 LLGIFEQNQDRK 12 1 1 Unmodified _LLGIFEQNQDRK_ 0 0 1 B2RE29;A0A024RBG1 B2RE29 B2RE29 NUDT4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.8961 2 730.89644 1459.77833 72972.26 0.47921 0.00035025 0.061382 4.4864E-05 0.54059 0.00039511 730.896598849221 739.907640165946 62.244 0.4815 62.244 62.093 62.575 -3.8147E-06 153 42 6 0 0 0 0.0095438 1 35699 38.293 28.061 1 0.71442 0.8225 0 27523000 16396000 11128000 21898 337 8276 8464 34354 34354 LLGIFEQNQDRK 12 1 1 Unmodified _LLGIFEQNQDRK_ 0 0 1 B2RE29;A0A024RBG1 B2RE29 B2RE29 NUDT4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.5997 3 487.600052 1459.77833 85597.03 0.028857 1.4071E-05 -0.17456 -8.5118E-05 -0.14571 -7.1047E-05 487.599824801583 493.607342609025 62.228 1.372 62.228 62.069 63.441 3.8147E-06 611 128 9 0 0 0 0.033984 1 36121 22.046 15.007 1 0.72517 0.87561 0 156550000 84772000 71774000 21899 337 8276 8464 34355 34355 LLGLTPPEGGAGDRSEEEASSTEK 24 1 1 Unmodified _LLGLTPPEGGAGDRSEEEASSTEK_ 0 0 1 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.7259 3 810.725874 2429.15579 NaN NaN NaN -0.19979 -0.00016198 NaN NaN NaN NaN 69.151 0.085403 69.151 69.108 69.194 0 0 0 0 0.0016738 1 40154 40.012 31.925 1 NaN NaN 0 3314800 3314800 0 21900 80 8277 8465 34356 34356 LLGNTFVALSDLR 13 0 1 Unmodified _LLGNTFVALSDLR_ 0 0 0 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;F6S6P2;X6REW1;A0A0G2JJM1 A0A0G2JL47 A0A0G2JL47 BAT3;BAG6 Large proline-rich protein BAG6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.9076 2 709.903734 1417.79291 74231.62 0.91699 0.00065098 -0.10131 -7.192E-05 0.81568 0.00057906 710.405938849399 714.90718672851 116.83 0.46943 116.83 116.67 117.14 0 155 32 6 0 0 0 0.00015608 1 74717 85.958 55.394 1 1.3769 1.3762 0 16512000 8145100 8366900 21901 368 8278 8466 34357 34357 LLGNVLVVVLAR 12 0 1 Unmodified _LLGNVLVVVLAR_ 0 0 0 CON__Q3SX09;CON__P02070 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.4182 2 633.418823 1264.82309 NaN NaN NaN -0.12269 -7.7714E-05 NaN NaN NaN NaN 128.9 0.49846 128.9 128.52 129.02 0 0 0 0 2.0889E-47 1 84060 175.51 119.84 1 NaN NaN 0 13091000 13091000 0 + 21902 1172 8279 8467 34358 34358 LLGNVLVVVLAR 12 0 1 Unmodified _LLGNVLVVVLAR_ 0 0 0 CON__Q3SX09;CON__P02070 CON__Q3SX09 CON__Q3SX09 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.4191 2 633.418823 1264.82309 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.32 1 130.32 129.82 130.82 0 0 0 0 0.001164 1 84972 71.223 49.716 1 + 21903 1172 8279 8467 34359 34359 LLGNVLVVVLAR 12 0 1 Unmodified _LLGNVLVVVLAR_ 0 0 0 CON__Q3SX09;CON__P02070 CON__Q3SX09 CON__Q3SX09 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.7239 2 633.418823 1264.82309 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.31 1 129.31 128.81 129.81 0 0 0 0 0.0093161 1 86361 57.59 34.161 1 + 21904 1172 8279 8467 34360 34360 LLGNVLVVVLAR 12 0 1 Unmodified _LLGNVLVVVLAR_ 0 0 0 CON__Q3SX09;CON__P02070 CON__Q3SX09 CON__Q3SX09 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.4192 2 633.418823 1264.82309 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.45 1 129.45 128.95 129.95 0 0 0 0 0.013461 1 86471 55.112 38.336 1 + 21905 1172 8279 8467 34361 34361 LLGNVLVVVLAR 12 0 1 Unmodified _LLGNVLVVVLAR_ 0 0 0 CON__Q3SX09;CON__P02070 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.4191 2 633.418823 1264.82309 NaN NaN NaN 0.09532 6.0378E-05 NaN NaN NaN NaN 134.84 0.13826 134.84 134.76 134.9 0 0 0 0 0.0016731 1 81677 75.378 51.95 1 NaN NaN 0 26834000 26834000 0 + 21906 1172 8279 8467 34362 34362 LLGPDAAINLTDPDGALAK 19 1 0 Unmodified _LLGPDAAINLTDPDGALAK_ 0 0 0 A8K8J9;F8W1I6;B3KTX4;V9HW58;Q53H88;Q13561;H0YI98;F8VW18 A8K8J9 A8K8J9 DCTN2;HEL-S-77 Dynactin subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 937.0135 2 933.004373 1863.99419 66418.26 0.66039 0.00061615 0.50105 0.00046748 1.1614 0.0010836 933.004644554137 937.01220296019 124.26 0.36038 124.26 124.15 124.51 -7.6294E-06 56 14 6 0 0 0 0.051792 1 73557 24.275 19.474 1 1.2377 0.97932 0 2327700 1141200 1186600 21907 777 8280 8468 34363 34363 LLGQFTLIGIPPAPR 15 0 1 Unmodified _LLGQFTLIGIPPAPR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z4T3;A1XP52;H0Y8S0 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.9813 2 796.979776 1591.945 68421.38 1.1087 0.00088358 -0.080762 -6.4366E-05 1.0279 0.00081922 796.979687863129 801.983790301646 125.35 1.2305 125.35 124.77 126 0 470 83 8 0 0 0 2.7571E-07 4 81706 112.13 112.13 1 2.6564 2.7173 0 35374000 9735100 25639000 21908 1092 8281 8469 34364;34365;34366;34367 34367 LLGQFTLIGIPPAPR 15 0 1 Unmodified _LLGQFTLIGIPPAPR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z4T3;A1XP52;H0Y8S0 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.9844 2 796.979776 1591.945 68386.56 1.2394 0.00098777 -0.11913 -9.4942E-05 1.1203 0.00089283 797.480983911519 801.983794992345 124.86 1.1966 124.86 124.32 125.52 7.6294E-06 484 82 9 0 0 0 9.249E-05 4 83380 91.937 91.937 1 2.5827 2.9047 0 46143000 12046000 34097000 21909 1092 8281 8469 34368;34369;34370;34371 34370 LLGQPSLDSLPIPAPR 16 0 1 Unmodified _LLGQPSLDSLPIPAPR_ 0 0 0 Q9NUL7 Q9NUL7 Q9NUL7 DDX28 Probable ATP-dependent RNA helicase DDX28 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 842.7433 2 837.482879 1672.95121 73939.07 1.5793 0.0013226 -0.7172 -0.00060064 0.8621 0.000722 837.48184333052 842.48673016909 118.45 0.30842 118.45 118.28 118.59 7.6294E-06 60 18 5 0 0 0 0.0088359 1 75999 48.004 48.004 1 0.67138 0.68942 0 6455000 3764400 2690600 21910 2072 8282 8470 34372 34372 LLGQPSLDSLPIPAPR 16 0 1 Unmodified _LLGQPSLDSLPIPAPR_ 0 0 0 Q9NUL7 Q9NUL7 Q9NUL7 DDX28 Probable ATP-dependent RNA helicase DDX28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.488 2 837.482879 1672.95121 68084.91 0.92531 0.00077493 -0.18311 -0.00015335 0.74219 0.00062158 837.482634211572 842.487166703456 117.99 0.34607 117.99 117.8 118.14 0 75 24 5 0 0 0 0.00015204 3 77429 64.878 64.878 1 0.8407 0.83638 0 8210300 4666200 3544200 21911 2072 8282 8470 34373;34374;34375 34374 LLGSGYGGLTGGSSR 15 0 1 Unmodified _LLGSGYGGLTGGSSR_ 0 0 0 B7Z5R7;B7Z4E5;B7Z7Q8;H0Y5T1;F8WA11;Q7Z460;Q6TAR3 B7Z5R7 B7Z5R7 CLASP1 CLIP-associating protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.8592 2 691.357148 1380.69974 NaN NaN NaN 0.40414 0.00027941 NaN NaN NaN NaN 64.856 0.38853 64.856 64.6 64.989 0 0 0 0 0.028894 1 37253 53.569 27.055 1 NaN NaN 0 4071300 4071300 0 21912 1090 8283 8471 34376 34376 LLGSLYALGIPK 12 1 0 Unmodified _LLGSLYALGIPK_ 0 0 0 D3DVL7;B4DU42;Q969Z0;C9IZN7;B3KM73;C9J7P5 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8926 2 622.884281 1243.75401 78902.13 0.67466 0.00042023 0.06624 4.126E-05 0.7409 0.00046149 622.88425575302 626.891308046465 115.19 0.5834 115.19 114.9 115.49 7.6294E-06 153 37 6 0 0 0 1.7974E-12 2 73222 126.07 126.07 1 1.6998 1.7491 0 10756000 4745600 6010700 21913 1036 8284 8472 34377;34378 34378 LLGSLYALGIPK 12 1 0 Unmodified _LLGSLYALGIPK_ 0 0 0 D3DVL7;B4DU42;Q969Z0;C9IZN7;B3KM73;C9J7P5 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8917 2 622.884281 1243.75401 78989.85 0.6624 0.0004126 -0.082156 -5.1174E-05 0.58025 0.00036143 622.884330061226 626.891238163251 114.55 0.70518 114.55 114.26 114.96 7.6294E-06 162 44 6 0 0 0 2.3242E-08 3 74520 120.12 120.12 1 1.7944 1.877 0 10349000 3613600 6734900 21914 1036 8284 8472 34379;34380;34381 34381 LLGSLYALGIPK 12 1 0 Unmodified _LLGSLYALGIPK_ 0 0 0 D3DVL7;B4DU42;Q969Z0;C9IZN7;B3KM73;C9J7P5 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8921 2 622.884281 1243.75401 80068.37 0.75494 0.00047024 0.23402 0.00014577 0.98897 0.00061601 622.884460077816 626.89149288055 126.72 0.43221 126.72 126.45 126.88 7.6294E-06 56 15 5 0 0 0 0.057423 1 76250 31.422 31.422 1 1.2179 1.033 0 1171900 590480 581450 21915 1036 8284 8472 34382 34382 LLGSLYALGIPK 12 1 0 Unmodified _LLGSLYALGIPK_ 0 0 0 D3DVL7;B4DU42;Q969Z0;C9IZN7;B3KM73;C9J7P5 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.8919 2 622.884281 1243.75401 80160.34 0.58649 0.00036532 0.13941 8.6838E-05 0.72591 0.00045216 622.884522499983 626.891278546612 126.49 0.41373 126.49 126.28 126.69 0 63 16 6 0 0 0 0.02692 1 75144 36.424 36.424 1 1.297 1.0738 0 1665300 678190 987090 21916 1036 8284 8472 34383 34383 LLGSMPENAQIDDDVFDK 18 1 0 Oxidation (M) _LLGSM(ox)PENAQIDDDVFDK_ LLGSM(1)PENAQIDDDVFDK LLGSM(121.76)PENAQIDDDVFDK 0 1 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1015.9763 2 1011.96987 2021.92519 60334.97 0.66579 0.00067376 -0.34936 -0.00035354 0.31643 0.00032021 1012.47150282344 1015.97695738617 92.968 0.77689 92.968 92.588 93.365 7.6294E-06 516 67 11 0 0 0 4.2447E-17 1 56214 121.76 121.76 1 1.1775 1.3345 0 97535000 48583000 48952000 21917 1995 8285 8473 34384 34384 1826 LLGSMPENAQIDDDVFDK 18 1 0 Oxidation (M) _LLGSM(ox)PENAQIDDDVFDK_ LLGSM(1)PENAQIDDDVFDK LLGSM(174.95)PENAQIDDDVFDK 0 1 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1015.9786 2 1011.96987 2021.92519 60154.2 0.45507 0.00046052 -0.11026 -0.00011158 0.34481 0.00034894 1011.96988408181 1016.478456712 92.35 0.62593 92.35 91.998 92.624 0 435 53 10 0 0 0 5.7981E-52 2 57071 174.95 174.95 1 1.2264 1.4077 0 169360000 82426000 86935000 21918 1995 8285 8473 34385;34386 34385 1826 LLGSMPENAQIDDDVFDK 18 1 0 Oxidation (M) _LLGSM(ox)PENAQIDDDVFDK_ LLGSM(1)PENAQIDDDVFDK LLGSM(68.28)PENAQIDDDVFDK 0 1 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1015.977 2 1011.96987 2021.92519 59874.22 0.3889 0.00039355 -0.12713 -0.00012865 0.26177 0.0002649 1012.47143896194 1015.97685959643 106.21 0.73859 106.21 105.91 106.65 -7.6294E-06 308 37 13 0 0 0 1.3076E-05 2 60576 68.277 68.277 1 1.1426 0.93983 0 39375000 18015000 21360000 21919 1995 8285 8473 34387;34388 34388 1826 LLGSMPENAQIDDDVFDK 18 1 0 Oxidation (M) _LLGSM(ox)PENAQIDDDVFDK_ LLGSM(1)PENAQIDDDVFDK LLGSM(44.44)PENAQIDDDVFDK 0 1 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1015.9772 2 1011.96987 2021.92519 60907.18 0.15283 0.00015466 0.53934 0.00054579 0.69217 0.00070045 1012.47203823901 1015.97739193901 116.85 0.64523 116.85 116.58 117.23 0 103 24 7 0 0 0 0.00023912 1 68690 44.44 43.773 1 1.6453 1.2959 0 4032600 1792600 2240000 21920 1995 8285 8473 34389 34389 1826 LLGSMPENAQIDDDVFDK 18 1 0 Oxidation (M) _LLGSM(ox)PENAQIDDDVFDK_ LLGSM(1)PENAQIDDDVFDK LLGSM(76.73)PENAQIDDDVFDK 0 1 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1016.4775 2 1011.96987 2021.92519 60159.01 0.31638 0.00032017 0.00096787 9.7946E-07 0.31735 0.00032115 1011.96997799528 1015.97697753935 106.13 0.76344 106.13 105.8 106.57 0 367 45 13 0 0 0 6.9368E-06 2 59621 76.728 76.728 1 1.168 0.97094 0 37972000 17015000 20957000 21921 1995 8285 8473 34390;34391 34390 1826 LLGSMPENAQIDDDVFDK 18 1 0 Unmodified _LLGSMPENAQIDDDVFDK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1008.4798 2 1003.97241 2005.93027 60423.77 0.12812 0.00012863 0.080149 8.0468E-05 0.20827 0.0002091 1004.47375615818 1007.97973242884 116.87 0.70393 116.87 116.58 117.29 7.6294E-06 175 27 13 0 0 0 0.012707 1 68607 27.028 27.028 1 1.7925 1.435 0 8613800 2816300 5797500 21922 1995 8285 8474 34392 34392 LLGSTLTSEEK 11 1 0 Unmodified _LLGSTLTSEEK_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.3193 2 589.319168 1176.62378 83791.05 0.34466 0.00020312 0.32053 0.00018889 0.66519 0.00039201 589.319665001673 593.326154565194 52.871 0.63295 52.871 52.545 53.178 3.8147E-06 102 48 4 0 0 0 0.0012874 1 29329 68.657 38.472 1 0.67431 0.70172 0 12380000 6583000 5797200 21923 2045 8286 8475 34393 34393 LLGSTLTSEEK 11 1 0 Unmodified _LLGSTLTSEEK_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3276 2 589.319168 1176.62378 81709.02 0.48908 0.00028823 0.8935 0.00052656 1.3826 0.00081478 589.319932405563 593.326970415119 51.53 0.54656 51.53 51.163 51.709 0 129 42 5 0 0 0 0.0014091 2 29252 67.726 31.846 1 0.81083 0.84692 0 24319000 12213000 12106000 21924 2045 8286 8475 34394;34395 34395 LLGSTLTSEEK 11 1 0 Unmodified _LLGSTLTSEEK_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.3207 2 589.319168 1176.62378 81015.53 0.42961 0.00025318 0.5947 0.00035047 1.0243 0.00060364 589.319545882373 593.326689813991 61.032 0.36646 61.032 60.842 61.209 0 120 33 6 0 0 0 0.041213 1 30574 35.908 13.416 1 1.4544 1.1686 0 2486200 1085000 1401200 21925 2045 8286 8475 34396 34396 LLGTIYTAAEEIEAVGGK 18 1 0 Unmodified _LLGTIYTAAEEIEAVGGK_ 0 0 0 B2R923;A0A024R159;Q6YN16 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.5012 2 917.993474 1833.97239 67057.01 0.63384 0.00058186 0.085678 7.8652E-05 0.71952 0.00066051 918.495692019049 922.502605331636 122.43 0.56567 122.43 122.2 122.76 0 127 40 7 0 0 0 0.00026972 2 79192 47.189 47.189 1 3.4396 3.4597 0 9956600 3061000 6895600 21926 70 8287 8476 34397;34398 34397 LLGTIYTAAEEIEAVGGK 18 1 0 Unmodified _LLGTIYTAAEEIEAVGGK_ 0 0 0 B2R923;A0A024R159;Q6YN16 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.4977 2 917.993474 1833.97239 64861.56 0.68524 0.00062905 0.32535 0.00029867 1.0106 0.00092772 918.49601403501 922.502261543979 121.82 0.49188 121.82 121.61 122.1 -7.6294E-06 127 34 7 0 0 0 0.00015 2 80690 48.659 48.659 1 2.696 2.799 0 11207000 2641600 8565300 21927 70 8287 8476 34399;34400 34400 LLGTIYTAAEEIEAVGGK 18 1 0 Unmodified _LLGTIYTAAEEIEAVGGK_ 0 0 0 B2R923;A0A024R159;Q6YN16 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 917.9933 2 917.993474 1833.97239 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.78 1 121.78 121.28 122.28 -7.6294E-06 0 0 0 0.00024766 1 80678 82.543 50.7 1 21928 70 8287 8476 34401 34401 LLGTPDIGSISNLLIK 16 1 0 Unmodified _LLGTPDIGSISNLLIK_ 0 0 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.5002 2 827.492913 1652.97127 68089.3 0.89944 0.00074428 -0.32803 -0.00027144 0.57142 0.00047284 827.994090542348 831.499390761265 130.53 0.77106 130.53 130.03 130.8 0 250 48 7 0 0 0 1.0895E-08 3 85114 106.49 106.49 1 0.97233 1.0325 0 16106000 8754700 7351200 21929 1680 8288 8477 34402;34403;34404 34404 LLGTPDIGSISNLLIK 16 1 0 Unmodified _LLGTPDIGSISNLLIK_ 0 0 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.0022 2 827.492913 1652.97127 67968.69 0.89141 0.00073764 -0.34448 -0.00028506 0.54693 0.00045258 827.49291550054 831.499383473836 130.1 0.78128 130.1 129.65 130.44 0 277 53 7 0 0 0 0.00014461 4 86948 75.78 75.78 1 1.0127 1.0109 0 14275000 7040000 7234800 21930 1680 8288 8477 34405;34406;34407;34408 34408 LLGTPDIGSISNLLIK 16 1 0 Unmodified _LLGTPDIGSISNLLIK_ 0 0 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.4111 2 827.492913 1652.97127 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.87 1 134.87 134.37 135.37 0 0 0 0 0.00096674 1 82553 66.498 48.633 1 21931 1680 8288 8477 34409 34409 LLGTQHGEGNSALSPLNPGELLIALHNIDSVK 32 1 0 Unmodified _LLGTQHGEGNSALSPLNPGELLIALHNIDSVK_ 0 0 0 A0A087WUE9;Q4LE61;B7Z6F7;A0A024R0R6;Q92797 A0A087WUE9 A0A087WUE9 SYMPK;SYMPK variant protein Symplekin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.2019 4 827.696577 3306.7572 65665.12 0.82678 0.00068432 -0.24132 -0.00019974 0.58545 0.00048458 828.198112408832 829.950613319043 132.95 0.2113 132.95 132.86 133.07 0 53 8 11 0 0 0 0.00029634 1 86966 34.575 34.575 1 1.4452 1.4796 0 13080000 5371200 7708600 21932 56 8289 8478 34410 34410 LLGTQHGEGNSALSPLNPGELLIALHNIDSVK 32 1 0 Unmodified _LLGTQHGEGNSALSPLNPGELLIALHNIDSVK_ 0 0 0 A0A087WUE9;Q4LE61;B7Z6F7;A0A024R0R6;Q92797 A0A087WUE9 A0A087WUE9 SYMPK;SYMPK variant protein Symplekin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.9515 4 827.696577 3306.7572 66852.86 1.1082 0.00091729 -0.18702 -0.0001548 0.92122 0.00076249 828.197994950298 829.950591463432 132.91 0.17435 132.91 132.81 132.98 0 72 9 12 0 0 0 4.1862E-18 1 89125 63.724 63.724 1 1.2829 1.3314 0 24712000 10634000 14077000 21933 56 8289 8478 34411 34411 LLGVHTQTR 9 0 1 Unmodified _LLGVHTQTR_ 0 0 0 J3KMX2;B9EGA3;Q92925;J3QWB6 J3KMX2 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 345.5377 3 342.201452 1023.58253 102691.1 -0.29547 -0.00010111 0.16268 5.5669E-05 -0.13279 -4.544E-05 342.201404627592 345.537556522691 26.69 0.31932 26.69 26.516 26.835 0 62 18 5 0 0 0 0.014629 1 12013 40.331 17.751 1 0.76321 0.78353 0 25678000 13662000 12016000 21934 1120 8290 8479 34412 34412 LLGVHTQTR 9 0 1 Unmodified _LLGVHTQTR_ 0 0 0 J3KMX2;B9EGA3;Q92925;J3QWB6 J3KMX2 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 345.5374 3 342.201452 1023.58253 NaN NaN NaN 0.47375 0.00016212 NaN NaN NaN NaN 25.789 0.47415 25.789 25.589 26.063 -1.9073E-06 0 0 0 0.045504 1 11380 31.494 15.613 1 NaN NaN 0 6433200 0 6433200 21935 1120 8290 8479 34413 34413 LLGYVATLK 9 1 0 Unmodified _LLGYVATLK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.3128 2 489.305136 976.595718 87165.7 0.26167 0.00012804 0.054759 2.6794E-05 0.31643 0.00015483 489.304885507686 493.312188331414 83.161 0.64626 83.161 82.87 83.516 7.6294E-06 258 54 7 0 0 0 0.041466 2 49697 41.448 6.6189 1 2.4821 2.6996 0 48037000 12568000 35469000 21936 42 8291 8480 34414;34415 34414 LLGYVATLK 9 1 0 Unmodified _LLGYVATLK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.3115 2 489.305136 976.595718 87793.46 0.35597 0.00017418 0.10991 5.3778E-05 0.46587 0.00022795 489.304962761217 493.312174291242 81.934 0.7281 81.934 81.704 82.432 0 281 65 7 0 0 0 0.0063471 1 50029 64.42 21.174 1 2.3544 2.6314 0 87816000 25319000 62497000 21937 42 8291 8480 34416 34416 LLHDQVGVIQFGPYK 15 1 0 Unmodified _LLHDQVGVIQFGPYK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.9899 3 571.982274 1712.92499 81569.87 1.2003 0.00068656 -0.097204 -5.5599E-05 1.1031 0.00063096 572.316610932512 574.987813147214 93.191 0.33051 93.191 92.975 93.306 0 50 27 4 0 0 0 0.0010698 1 56504 41.967 41.967 1 1.8556 1.9413 0 11985000 5248400 6736200 21938 1607 8292 8481 34417 34417 LLHDQVGVIQFGPYK 15 1 0 Unmodified _LLHDQVGVIQFGPYK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.9887 3 571.982274 1712.92499 82338.05 0.68023 0.00038908 -0.26073 -0.00014913 0.41951 0.00023995 571.982387738304 574.987724851018 93.371 0.53468 93.371 93.245 93.779 0 109 46 5 0 0 0 0.010107 1 56707 26.292 26.292 1 1.3456 1.4041 0 11778000 5291800 6486100 21939 1607 8292 8481 34418 34418 LLHDQVGVIQFGPYK 15 1 0 Unmodified _LLHDQVGVIQFGPYK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.6539 3 571.982274 1712.92499 79592.3 0.52819 0.00030212 0.28617 0.00016368 0.81436 0.0004658 572.316112352 574.988110140018 105.29 0.44012 105.29 105.08 105.52 7.6294E-06 99 29 6 0 0 0 0.019938 1 60007 22.606 22.606 1 2.1259 1.6524 0 3631000 1015000 2616100 21940 1607 8292 8481 34419 34419 LLHDQVGVIQFGPYK 15 1 0 Unmodified _LLHDQVGVIQFGPYK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.9886 3 571.982274 1712.92499 80894.63 0.43461 0.00024859 0.37203 0.0002128 0.80665 0.00046139 571.982328356417 574.653854617675 105.06 0.78732 105.06 104.67 105.46 0 132 50 6 0 0 0 0.019938 1 58890 22.606 22.606 1 1.7816 1.3859 0 2185600 565080 1620500 21941 1607 8292 8481 34420 34420 LLHGSPNLR 9 0 1 Unmodified _LLHGSPNLR_ 0 0 0 Q71RB6;Q8N531 Q71RB6 Q71RB6 FBXL6 F-box/LRR-repeat protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 336.1976 3 336.197931 1005.57196 105026 0.64603 0.00021719 0.16949 5.6984E-05 0.81552 0.00027418 336.197864351706 339.534070716875 26.853 0.31475 26.853 26.745 27.059 0 44 14 5 0 0 0 0.00065979 1 12215 76.221 64.586 1 0.41864 0.41935 0 18610000 12185000 6425200 21942 1867 8293 8482 34421 34421 LLHIEELR 8 0 1 Unmodified _LLHIEELR_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8739 3 341.537953 1021.59203 NaN NaN NaN 0.35395 0.00012089 NaN NaN NaN NaN 64.505 0.32047 64.505 64.398 64.719 0 0 0 0 0.015699 1 37097 49.097 28.472 1 NaN NaN 0 4226700 0 4226700 21943 1793 8294 8483 34422 34422 LLHIEELR 8 0 1 Unmodified _LLHIEELR_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 341.5379 3 341.537953 1021.59203 103875.2 -0.13174 -4.4993E-05 0.15686 5.3575E-05 0.025126 8.5813E-06 341.537916698182 344.87415531067 60.565 0.79203 60.565 59.933 60.725 0 150 51 5 0 0 0 0.0035108 2 35452 62.546 62.546 1 1.1344 1.1818 0 22284000 11341000 10943000 21944 1793 8294 8483 34423;34424 34424 LLHINATALLEYPEYSGPLLPASAVAPGPSALDR 34 0 1 Unmodified _LLHINATALLEYPEYSGPLLPASAVAPGPSALDR_ 0 0 0 D3DVL7;B4DU42;Q969Z0;B3KRS4;B3KMT3;B3KM73;H7C4R5 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1176.9681 3 1172.96275 3515.86642 56606.41 0.31906 0.00037425 0.40594 0.00047616 0.725 0.0008504 1173.63294043169 1176.96730939941 132.94 0.14487 132.94 132.88 133.03 -1.5259E-05 51 7 10 0 0 0 3.2449E-05 1 89153 35.472 35.472 1 1.9799 2.1509 0 28354000 9521100 18833000 21945 1036 8295 8484 34425 34425 LLIDEAILK 9 1 0 Unmodified _LLIDEAILK_ 0 0 0 Q0VGA5;Q53HA4;Q5T5C7;P49591 Q0VGA5 Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.3309 2 514.323525 1026.6325 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.47 1 104.47 103.97 104.97 0 0 0 0 0.014831 1 66202 58.981 20.743 1 21946 1584 8296 8485 34426 34426 LLIELLR 7 0 1 Unmodified _LLIELLR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93;Q9Y4Q3 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.299 2 435.294571 868.574589 95704.67 0.27441 0.00011945 -0.22696 -9.8796E-05 0.047441 2.0651E-05 435.294421899828 440.298564755649 110.47 0.58691 110.47 110.25 110.84 0 110 43 4 0 0 0 0.037563 2 71081 60.788 0 1 0.84925 0.84911 0 9057000 4563100 4493900 21947 162 8297 8486 34427;34428 34427 LLIHQSLAGGIIGVK 15 1 0 Unmodified _LLIHQSLAGGIIGVK_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.3181 3 506.983726 1517.92935 84847.31 0.49987 0.00025343 0.087653 4.4439E-05 0.58752 0.00029786 506.983706762548 509.655074136145 94.407 1.524 94.407 93.643 95.167 0 615 139 6 0 0 0 1.3287E-06 1 57306 97.273 97.273 1 1.7335 1.9517 0 117630000 48954000 68675000 21948 102 8298 8487 34429 34429 LLILALER 8 0 1 Unmodified _LLILALER_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.8131 2 470.813128 939.611703 88512.35 0.36309 0.00017095 -0.21371 -0.00010062 0.14938 7.0329E-05 470.812992653736 475.817192354291 106.11 0.90459 106.11 105.78 106.69 0 247 65 6 0 0 0 0.0019394 1 65780 104.37 85.987 1 0.86479 0.89902 0 22163000 12956000 9207300 21949 1854 8299 8488 34430 34430 LLILALER 8 0 1 Unmodified _LLILALER_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.8132 2 470.813128 939.611703 88612.26 0.36842 0.00017346 -0.07436 -3.501E-05 0.29406 0.00013845 470.812987910093 475.817212145375 105.31 0.83957 105.31 104.94 105.78 0 262 63 6 0 0 0 0.0029606 1 66650 98.299 81.335 1 0.85236 0.97716 0 51509000 26423000 25086000 21950 1854 8299 8488 34431 34431 LLILALER 8 0 1 Unmodified _LLILALER_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.8175 2 470.813128 939.611703 89260.86 0.40071 0.00018866 0.15813 7.4448E-05 0.55884 0.00026311 470.813119423198 475.817225694573 117.6 0.6263 117.6 117.35 117.98 0 96 28 6 0 0 0 0.031343 2 69353 51.346 41.029 1 0.83418 0.7182 0 2671500 1291900 1379500 21951 1854 8299 8488 34432;34433 34433 LLILALER 8 0 1 Unmodified _LLILALER_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 470.813 2 470.813128 939.611703 89472.13 0.30645 0.00014428 -0.036254 -1.7069E-05 0.27019 0.00012721 470.812978914253 475.817143665359 117.35 0.69919 117.35 117.07 117.76 0 103 33 6 0 0 0 0.057457 1 68106 41.029 41.029 1 0.86161 0.73114 0 2998000 1673400 1324600 21952 1854 8299 8488 34434 34434 LLILMEAR 8 0 1 Oxidation (M) _LLILM(ox)EAR_ LLILM(1)EAR LLILM(58.92)EAR 0 1 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.7941 2 487.788795 973.563038 NaN NaN NaN 0.31366 0.000153 NaN NaN NaN NaN 76.997 0.48271 76.997 76.762 77.245 0 0 0 0 0.0095194 1 45467 58.917 15.794 1 NaN NaN 0 3968400 0 3968400 21953 1561 8300 8489 34435 34435 1312 LLINLYK 7 1 0 Unmodified _LLINLYK_ 0 0 0 Q9H8H0;J3QKV1 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.7886 2 438.781296 875.54804 101257.3 0.4184 0.00018359 0.78997 0.00034662 1.2084 0.00053021 438.781201370325 442.788753912308 87.896 0.718 87.896 87.256 87.974 0 134 55 6 0 0 0 0.026691 3 53972 74.717 0 1 0.81193 0.90712 0 90021000 47445000 42576000 21954 2042 8301 8490 34436;34437;34438 34437 LLISHLSGIR 10 0 1 Unmodified _LLISHLSGIR_ 0 0 0 P83111;H0YNN5 P83111 P83111 LACTB Serine beta-lactamase-like protein LACTB, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.5686 3 370.232752 1107.67643 NaN NaN NaN -0.21591 -7.9938E-05 NaN NaN NaN NaN 69.811 0.54588 69.811 69.482 70.028 0 0 0 0 0.012087 1 41549 49.35 39.346 1 NaN NaN 0 3931000 0 3931000 21955 1671 8302 8491 34439 34439 LLITGTPLQNSLK 13 1 0 Unmodified _LLITGTPLQNSLK_ 0 0 0 O14646;A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 O14646;A0A024RC75 O14646 CHD1;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.429 2 699.421759 1396.82897 74409.85 0.53906 0.00037703 0.10414 7.2841E-05 0.6432 0.00044987 699.421851247459 703.428922095619 99.614 0.69012 99.614 99.401 100.09 7.6294E-06 297 57 7 0 0 0 7.4568E-05 2 60943 94.692 76.524 1 0.86267 0.92722 0 39892000 22402000 17490000 21956 1366;354 8303 8492 34440;34441 34440 LLITGTPLQNSLK 13 1 0 Unmodified _LLITGTPLQNSLK_ 0 0 0 O14646;A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 O14646;A0A024RC75 O14646 CHD1;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.4226 2 699.421759 1396.82897 74098.06 0.77571 0.00054255 -0.046103 -3.2246E-05 0.72961 0.0005103 699.421692754482 703.428755762705 98.949 0.69466 98.949 98.631 99.326 -7.6294E-06 290 57 6 0 0 0 8.0557E-06 2 61885 102.52 83.281 1 0.74083 0.80276 0 38906000 21904000 17002000 21957 1366;354 8303 8492 34442;34443 34443 LLITGTPLQNSLK 13 1 0 Unmodified _LLITGTPLQNSLK_ 0 0 0 O14646;A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 O14646;A0A024RC75 O14646 CHD1;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.4223 2 699.421759 1396.82897 73794.35 0.90341 0.00063186 -0.27243 -0.00019054 0.63098 0.00044132 699.421505479546 703.428586925196 112.45 0.57796 112.45 112.17 112.74 0 166 31 8 0 0 0 0.00036872 2 65249 62.303 52.87 1 1.0096 0.78886 0 11903000 6882800 5020500 21958 1366;354 8303 8492 34444;34445 34445 LLITGTPLQNSLK 13 1 0 Unmodified _LLITGTPLQNSLK_ 0 0 0 O14646;A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 O14646;A0A024RC75 O14646 CHD1;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.4293 2 699.421759 1396.82897 73691.7 0.61722 0.0004317 0.044152 3.0881E-05 0.66137 0.00046258 699.421655111083 703.428823224026 112.2 0.7634 112.2 111.83 112.6 0 181 41 8 0 0 0 0.00015367 2 64143 86.898 72.778 1 0.95004 0.78016 0 12333000 6153600 6179100 21959 1366;354 8303 8492 34446;34447 34446 LLIVSTTPYSEK 12 1 0 Unmodified _LLIVSTTPYSEK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.8812 2 675.879393 1349.74423 75217.81 0.72668 0.00049115 -5.6394E-05 -3.8116E-08 0.72662 0.00049111 675.879190708039 679.886754545425 83.046 0.66617 83.046 82.838 83.504 7.6294E-06 336 56 8 0 0 0 5.7951E-05 2 49651 98.254 80.39 1 0.85601 0.96419 0 116200000 63769000 52432000 21960 2120 8304 8493 34448;34449 34449 LLIVSTTPYSEK 12 1 0 Unmodified _LLIVSTTPYSEK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.8793 2 675.879393 1349.74423 NaN NaN NaN -0.65846 -0.00044504 NaN NaN NaN NaN 82.097 0.54639 82.097 81.787 82.334 0 0 0 0 2.076E-08 1 50207 112.36 85.054 1 NaN NaN 0 113910000 113910000 0 21961 2120 8304 8493 34450 34450 LLIVSTTPYSEK 12 1 0 Unmodified _LLIVSTTPYSEK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.8801 2 675.879393 1349.74423 NaN NaN NaN -0.6145 -0.00041533 NaN NaN NaN NaN 94.923 0.61668 94.923 94.65 95.266 0 0 0 0 0.0050706 1 53079 62.823 43.036 1 NaN NaN 0 6831800 6831800 0 21962 2120 8304 8493 34451 34451 LLIVSTTPYSEK 12 1 0 Unmodified _LLIVSTTPYSEK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.8793 2 675.879393 1349.74423 NaN NaN NaN -0.61119 -0.00041309 NaN NaN NaN NaN 94.778 0.59315 94.778 94.517 95.11 0 0 0 0 0.019439 1 52186 51.436 36.285 1 NaN NaN 0 6813300 6813300 0 21963 2120 8304 8493 34452 34452 LLLAFQK 7 1 0 Unmodified _LLLAFQK_ 0 0 0 Q14781 Q14781 Q14781 CBX2 Chromobox protein homolog 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 420.775 2 416.768189 831.521825 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.42 1 81.42 80.92 81.92 0 0 0 0 0.022583 1 48527 77.72 36.799 1 21964 1744 8305 8494 34453 34453 LLLDDLVPTSR 11 0 1 Unmodified _LLLDDLVPTSR_ 0 0 0 Q6IN84 Q6IN84 Q6IN84 MRM1 rRNA methyltransferase 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.3584 2 621.358628 1240.7027 79321.2 0.93166 0.0005789 -0.37051 -0.00023022 0.56115 0.00034867 621.358318543794 626.362489560979 111.94 0.47192 111.94 111.72 112.2 0 99 33 5 0 0 0 0.00024383 2 70498 90.906 81.109 1 0.47637 0.49616 0 5218600 3279900 1938700 21965 1844 8306 8495 34454;34455 34454 LLLDDLVPTSR 11 0 1 Unmodified _LLLDDLVPTSR_ 0 0 0 Q6IN84 Q6IN84 Q6IN84 MRM1 rRNA methyltransferase 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.3633 2 621.358628 1240.7027 83936.98 0.56865 0.00035333 0.25537 0.00015868 0.82402 0.00051201 621.358688735081 626.362953960266 111.41 0.50256 111.41 111.17 111.67 0 100 33 5 0 0 0 0.0017197 1 71918 65.347 65.347 1 0.26771 0.26995 0 6253900 4950300 1303600 21966 1844 8306 8495 34456 34456 LLLDTFEYQGLVK 13 1 0 Unmodified _LLLDTFEYQGLVK_ 0 0 0 Q7Z7K6;A0A0M3HER2 Q7Z7K6;A0A0M3HER2 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.9348 2 769.926874 1537.8392 69488.34 1.0263 0.0007902 -0.067605 -5.2051E-05 0.95872 0.00073815 769.926878161703 773.933812594799 118.23 1.0163 118.23 117.93 118.95 0 348 59 10 0 0 0 2.9191E-13 2 75694 125.48 125.48 1 1.2504 1.4447 0 224340000 100750000 123590000 21967 1882;541 8307 8496 34457;34458 34458 LLLDTFEYQGLVK 13 1 0 Unmodified _LLLDTFEYQGLVK_ 0 0 0 Q7Z7K6;A0A0M3HER2 Q7Z7K6;A0A0M3HER2 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.9347 2 769.926874 1537.8392 69812.48 1.0118 0.00077899 0.057963 4.4627E-05 1.0697 0.00082362 769.926887360763 773.933914367617 117.78 0.87939 117.78 117.48 118.36 0 402 57 10 0 0 0 7.6509E-14 2 77144 134.68 134.68 1 1.2353 1.442 0 270720000 120540000 150180000 21968 1882;541 8307 8496 34459;34460 34460 LLLDTFEYQGLVK 13 1 0 Unmodified _LLLDTFEYQGLVK_ 0 0 0 Q7Z7K6;A0A0M3HER2 Q7Z7K6;A0A0M3HER2 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 773.9346 2 769.926874 1537.8392 69070.94 0.76991 0.00059277 0.015342 1.1812E-05 0.78525 0.00060458 769.92710334009 773.93392179004 130.02 1.9025 130.02 129.62 131.53 0 518 88 12 0 0 0 3.728E-09 5 78620 121.5 121.5 1 1.758 1.5147 0 96457000 34901000 61556000 21969 1882;541 8307 8496 34461;34462;34463;34464;34465 34463 LLLDTFEYQGLVK 13 1 0 Unmodified _LLLDTFEYQGLVK_ 0 0 0 Q7Z7K6;A0A0M3HER2 Q7Z7K6;A0A0M3HER2 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 769.9278 2 769.926874 1537.8392 69545.77 1.1595 0.00089273 0.19877 0.00015304 1.3583 0.0010458 769.927252331517 773.934059869027 129.84 2.5771 129.84 129.49 132.07 0 403 106 12 0 0 0 8.997E-19 7 77601 142.83 142.83 1 1.7705 1.518 0 132690000 46166000 86524000 21970 1882;541 8307 8496 34466;34467;34468;34469;34470;34471;34472 34468 LLLEAQAATGFLLDPVK 17 1 0 Unmodified _LLLEAQAATGFLLDPVK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.0273 2 900.019295 1798.02404 66072.13 1.0232 0.0009209 -0.6413 -0.00057718 0.3819 0.00034372 900.019083084744 904.026117978212 128.75 0.26108 128.75 128.53 128.79 0 88 14 8 0 0 0 6.2537E-45 1 83979 164.68 159.47 1 1.6892 1.7341 0 17549000 5964600 11585000 21971 1754 8308 8497 34473 34473 LLLEAQAATGFLLDPVK 17 1 0 Unmodified _LLLEAQAATGFLLDPVK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.5284 2 900.019295 1798.02404 66659.28 0.6929 0.00062362 -0.33774 -0.00030397 0.35516 0.00031965 900.019152612501 904.527654836906 128.38 0.31042 128.38 128.16 128.47 0 96 19 8 0 0 0 5.7021E-09 1 85813 102.62 102.62 1 1.655 1.6782 0 26452000 9510500 16942000 21972 1754 8308 8497 34474 34474 LLLEAQAATGFLLDPVK 17 1 0 Unmodified _LLLEAQAATGFLLDPVK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.9556 2 900.019295 1798.02404 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.56 1 128.56 128.06 129.06 0 0 0 0 6.2594E-08 1 85927 101.2 79.005 1 21973 1754 8308 8497 34475 34475 LLLEEIYR 8 0 1 Unmodified _LLLEEIYR_ 0 0 0 Q9Y2P8;Q5VZU3;Q5VZU2 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.8095 2 524.8055 1047.59645 83884.55 0.46678 0.00024497 -0.12321 -6.4659E-05 0.34358 0.00018031 524.805321465312 529.80952067889 97.123 1.0242 97.123 96.566 97.59 -7.6294E-06 339 88 6 0 0 0 0.0077612 2 59072 88.942 78.069 1 0.87867 0.89883 0 34908000 16278000 18630000 21974 2125 8309 8498 34476;34477 34477 LLLEEIYR 8 0 1 Unmodified _LLLEEIYR_ 0 0 0 Q9Y2P8;Q5VZU3;Q5VZU2 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.8096 2 524.8055 1047.59645 84369.34 0.44511 0.0002336 -0.19354 -0.00010157 0.25157 0.00013202 524.805409736626 529.809577836875 96.2 1.098 96.2 95.644 96.742 0 373 93 7 0 0 0 0.0077612 2 59930 88.942 88.942 1 0.89944 1.0379 0 55204000 30533000 24671000 21975 2125 8309 8498 34478;34479 34479 LLLEEIYR 8 0 1 Unmodified _LLLEEIYR_ 0 0 0 Q9Y2P8;Q5VZU3;Q5VZU2 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.81 2 524.8055 1047.59645 83450.22 0.43978 0.0002308 0.18306 9.6072E-05 0.62284 0.00032687 524.80556159265 529.809643073477 109.81 1.0427 109.81 109.5 110.55 7.6294E-06 223 54 6 0 0 0 0.022994 1 63268 54.611 54.611 1 1.2314 1.0173 0 11442000 4634100 6807700 21976 2125 8309 8498 34480 34480 LLLEEIYR 8 0 1 Unmodified _LLLEEIYR_ 0 0 0 Q9Y2P8;Q5VZU3;Q5VZU2 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 524.8069 2 524.8055 1047.59645 84351.99 0.55281 0.00029012 0.14522 7.6211E-05 0.69803 0.00036633 524.805542765447 529.809678946757 109.71 0.98045 109.71 109.38 110.36 0 218 49 6 0 0 0 0.04634 2 62253 47.082 47.082 1 1.1859 0.96626 0 9591900 4598300 4993600 21977 2125 8309 8498 34481;34482 34482 LLLEFTDTSYEEK 13 1 0 Unmodified _LLLEFTDTSYEEK_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.3924 2 794.393061 1586.77157 69297.66 0.80509 0.00063956 0.38449 0.00030544 1.1896 0.00094499 794.393107645723 798.4005250105 102.35 0.85363 102.35 101.98 102.83 0 366 70 7 0 0 0 9.9151E-09 4 62939 115.18 105.49 1 2.6382 2.8668 0 47072000 15045000 32027000 21978 1503 8310 8499 34483;34484;34485;34486 34484 LLLEFTDTSYEEK 13 1 0 Unmodified _LLLEFTDTSYEEK_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.4008 2 794.393061 1586.77157 69176.29 0.7044 0.00055957 0.21601 0.0001716 0.92041 0.00073117 794.393004086409 798.400446489663 101.62 0.9399 101.62 101.28 102.22 0 354 73 7 0 0 0 0.00013986 3 63917 89.266 81.379 1 2.6027 2.8839 0 46804000 12075000 34729000 21979 1503 8310 8499 34487;34488;34489 34489 LLLEFTDTSYEEK 13 1 0 Unmodified _LLLEFTDTSYEEK_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 794.8932 2 794.393061 1586.77157 68925.16 1.0108 0.00080297 -0.31703 -0.00025184 0.69377 0.00055113 794.392710137635 798.400130633632 114.27 0.54245 114.27 114.05 114.59 0 113 23 7 0 0 0 0.0020461 3 66660 55.353 53.981 1 1.8383 1.4527 0 5188900 1730700 3458200 21980 1503 8310 8499 34490;34491;34492 34490 LLLEFTDTSYEEK 13 1 0 Unmodified _LLLEFTDTSYEEK_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 798.9008 2 794.393061 1586.77157 68813.54 0.76619 0.00060865 0.094761 7.5278E-05 0.86095 0.00068393 794.894591745552 798.400448191008 114.15 0.71441 114.15 113.88 114.6 7.6294E-06 108 29 6 0 0 0 0.00010772 2 65675 91.937 91.937 1 1.5431 1.2668 0 5245300 1895300 3350000 21981 1503 8310 8499 34493;34494 34494 LLLENYEEYAAR 12 0 1 Unmodified _LLLENYEEYAAR_ 0 0 0 K7EPJ1;Q16763 K7EPJ1 K7EPJ1 UBE2S Ubiquitin-conjugating enzyme E2 S ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3793 2 742.375006 1482.73546 NaN NaN NaN -1.2022 -0.00089247 NaN NaN NaN NaN 90.294 0.67723 90.294 89.951 90.628 7.6294E-06 0 0 0 3.3627E-08 1 55809 108.67 88.338 1 NaN NaN 0 9786500 0 9786500 21982 1343 8311 8500 34495 34495 LLLENYEEYAAR 12 0 1 Unmodified _LLLENYEEYAAR_ 0 0 0 K7EPJ1;Q16763 K7EPJ1 K7EPJ1 UBE2S Ubiquitin-conjugating enzyme E2 S MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.8813 2 742.375006 1482.73546 76452.94 0.77677 0.00057666 -0.11092 -8.2342E-05 0.66586 0.00049432 742.374697374459 747.378837396843 104.35 0.42557 104.35 104.18 104.61 -7.6294E-06 85 27 5 0 0 0 0.0022865 2 59474 58.978 58.978 1 2.413 2.1231 0 1648100 572880 1075200 21983 1343 8311 8500 34496;34497 34497 LLLEQILNK 9 1 0 Unmodified _LLLEQILNK_ 0 0 0 Q9UDM8;A4D0P7;O43913;Q53FC8;A8K8C0 Q9UDM8 Q9UDM8 ORC5L;ORC5 Origin recognition complex subunit 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.35 2 542.342249 1082.66995 NaN NaN NaN -0.43231 -0.00023446 NaN NaN NaN NaN 107.93 0.68045 107.93 107.62 108.31 0 0 0 0 0.014788 1 67292 62.969 30.128 1 NaN NaN 0 4367200 0 4367200 21984 657 8312 8501 34498 34498 LLLEQILNK 9 1 0 Unmodified _LLLEQILNK_ 0 0 0 Q9UDM8;A4D0P7;O43913;Q53FC8;A8K8C0 Q9UDM8 Q9UDM8 ORC5L;ORC5 Origin recognition complex subunit 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.3431 2 542.342249 1082.66995 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.93 1 107.93 107.43 108.43 0 0 0 0 0.030931 1 67311 52.716 16.836 1 21985 657 8312 8501 34499 34499 LLLEQILNK 9 1 0 Unmodified _LLLEQILNK_ 0 0 0 Q9UDM8;A4D0P7;O43913;Q53FC8;A8K8C0 Q9UDM8 Q9UDM8 ORC5L;ORC5 Origin recognition complex subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.3494 2 542.342249 1082.66995 85045.98 0.80269 0.00043533 -0.15148 -8.2156E-05 0.65121 0.00035318 542.342153000818 546.349249611767 107.26 0.55204 107.26 106.98 107.53 0 100 35 4 0 0 0 0.0036023 2 68359 71.379 28.133 1 1.6118 1.6254 0 7726500 3490300 4236200 21986 657 8312 8501 34500;34501 34500 LLLEQILNK 9 1 0 Unmodified _LLLEQILNK_ 0 0 0 Q9UDM8;A4D0P7;O43913;Q53FC8;A8K8C0 Q9UDM8 Q9UDM8 ORC5L;ORC5 Origin recognition complex subunit 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.3491 2 542.342249 1082.66995 85145.26 0.93671 0.00050802 -0.17836 -9.6732E-05 0.75836 0.00041129 542.342290139682 546.349264027526 119.28 0.46653 119.28 119.07 119.53 0 55 18 4 0 0 0 0.020683 2 70548 50.04 22.786 1 1.3561 1.1319 0 2234000 946910 1287000 21987 657 8312 8501 34502;34503 34503 LLLEQILNK 9 1 0 Unmodified _LLLEQILNK_ 0 0 0 Q9UDM8;A4D0P7;O43913;Q53FC8;A8K8C0 Q9UDM8 Q9UDM8 ORC5L;ORC5 Origin recognition complex subunit 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.3496 2 542.342249 1082.66995 85721.53 0.73885 0.00040071 -0.11831 -6.4167E-05 0.62054 0.00033654 542.342186802017 546.349248080374 119.02 0.36803 119.02 118.83 119.2 0 42 13 4 0 0 0 0.0067422 2 69494 63.419 27.024 1 1.1783 0.93273 0 3964700 1693200 2271500 21988 657 8312 8501 34504;34505 34505 LLLETHLPSK 10 1 0 Unmodified _LLLETHLPSK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 384.2324 3 384.23253 1149.67576 95029.61 0.054025 2.0758E-05 -0.11964 -4.5969E-05 -0.065614 -2.5211E-05 384.232428159094 386.903829136391 65.532 1.5589 65.532 64.741 66.3 0 709 140 7 0 0 0 0.00021973 4 37808 82.417 50.002 1 0.7724 0.87224 0 108060000 63559000 44504000 21989 785 8313 8502 34506;34507;34508;34509 34508 LLLETHLPSK 10 1 0 Unmodified _LLLETHLPSK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.8451 2 575.845156 1149.67576 80835.01 0.5398 0.00031084 -0.089501 -5.1539E-05 0.45029 0.0002593 575.845109800774 579.852233448047 65.449 1.2788 65.449 64.813 66.092 0 453 116 6 0 0 0 0.00020689 2 37536 93.098 60.258 1 0.72621 0.78237 0 33729000 18976000 14752000 21990 785 8313 8502 34510;34511 34511 LLLETHLPSK 10 1 0 Unmodified _LLLETHLPSK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 384.2326 3 384.23253 1149.67576 95297.08 0.25935 9.965E-05 -0.12284 -4.7198E-05 0.13651 5.2452E-05 384.232492853266 386.903819210562 63.444 1.27 63.444 63.109 64.379 -3.8147E-06 591 111 9 0 0 0 0.0053375 2 37163 47.894 28.579 1 0.74 0.862 0 248020000 135550000 112470000 21991 785 8313 8502 34512;34513 34513 LLLETHLPSK 10 1 0 Unmodified _LLLETHLPSK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.8524 2 575.845156 1149.67576 79869.8 0.65416 0.0003767 -0.099669 -5.7394E-05 0.55449 0.0003193 575.844958616781 579.852186113046 63.461 0.94926 63.461 63.148 64.097 -3.8147E-06 363 82 7 0 0 0 0.010281 2 37248 55.461 32.033 1 0.69566 0.7805 0 55156000 30468000 24688000 21992 785 8313 8502 34514;34515 34514 LLLETHLPSK 10 1 0 Unmodified _LLLETHLPSK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.8452 2 575.845156 1149.67576 80091.84 0.58627 0.0003376 -0.143 -8.2344E-05 0.44327 0.00025525 575.845008055936 579.852097524529 74.389 1.1263 74.389 74.057 75.184 0 365 79 8 0 0 0 0.011252 1 39375 61.161 37.733 1 0.99779 0.80775 0 23436000 12203000 11233000 21993 785 8313 8502 34516 34516 LLLETHLPSK 10 1 0 Unmodified _LLLETHLPSK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.8456 2 575.845156 1149.67576 80186.52 0.36587 0.00021069 0.057827 3.3299E-05 0.4237 0.00024399 575.845095338699 579.852170948706 74.562 1.1403 74.562 74.234 75.374 0 298 72 9 0 0 0 0.019675 2 38639 58.246 35.506 1 0.96878 0.77861 0 16942000 8767100 8175000 21994 785 8313 8502 34517;34518 34518 LLLFSSATDAAIR 13 0 1 Unmodified _LLLFSSATDAAIR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.3956 2 689.390459 1376.76637 73029.39 1.1047 0.00076156 0.35329 0.00024356 1.458 0.0010051 689.390478608817 694.394731960163 108.61 0.89211 108.61 108.23 109.12 7.6294E-06 374 60 8 0 0 0 4.3195E-06 2 67645 107.24 97.012 1 0.93775 1.0845 0 162960000 82402000 80562000 21995 1698;436 8314 8503 34519;34520 34519 LLLFSSATDAAIR 13 0 1 Unmodified _LLLFSSATDAAIR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.3951 2 689.390459 1376.76637 72769.43 0.7943 0.00054758 0.23632 0.00016292 1.0306 0.0007105 689.39033971097 694.394633792582 107.89 0.85323 107.89 107.53 108.39 0 393 62 9 0 0 0 2.29E-13 2 68842 128.17 118.16 1 0.9186 1.0477 0 96054000 47582000 48473000 21996 1698;436 8314 8503 34521;34522 34522 LLLFSSATDAAIR 13 0 1 Unmodified _LLLFSSATDAAIR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.3959 2 689.390459 1376.76637 73607.49 0.72411 0.0004992 0.72908 0.00050262 1.4532 0.0010018 689.390670782944 694.395139811521 119.72 0.85956 119.72 119.5 120.36 0 210 39 8 0 0 0 1.6519E-09 2 70924 123.63 116.24 1 1.2304 1.047 0 35101000 14509000 20592000 21997 1698;436 8314 8503 34523;34524 34524 LLLFSSATDAAIR 13 0 1 Unmodified _LLLFSSATDAAIR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.8979 2 689.390459 1376.76637 73803.97 0.60549 0.00041742 0.80376 0.00055411 1.4093 0.00097153 689.390954792856 694.395069792474 119.48 0.81703 119.48 119.28 120.1 0 188 36 8 0 0 0 3.4076E-09 2 69809 121.83 114.45 1 1.1344 0.98953 0 33777000 16446000 17332000 21998 1698;436 8314 8503 34525;34526 34526 LLLGAGAVAYGVR 13 0 1 Unmodified _LLLGAGAVAYGVR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3816 2 630.377155 1258.73976 76729.05 0.89647 0.00056511 -0.15686 -9.8879E-05 0.73961 0.00046624 630.3769694082 635.38115621728 96.678 1.3054 96.678 96.141 97.447 0 480 114 7 0 0 0 8.5988E-09 3 58702 116.52 101.26 1 1.4961 1.7701 0 317390000 126390000 191000000 21999 1328 8315 8504 34527;34528;34529 34528 LLLGAGAVAYGVR 13 0 1 Unmodified _LLLGAGAVAYGVR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3814 2 630.377155 1258.73976 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.118 1 98.118 97.618 98.618 -7.6294E-06 0 0 0 0.04422 1 59944 42.19 13.464 1 22000 1328 8315 8504 34530 34530 LLLGAGAVAYGVR 13 0 1 Unmodified _LLLGAGAVAYGVR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.3774 2 630.377155 1258.73976 76103.98 0.96129 0.00060597 -0.58589 -0.00036933 0.3754 0.00023664 630.376648633165 635.380931403583 95.923 1.4783 95.923 95.263 96.742 0 662 125 8 0 0 0 5.4747E-06 3 59441 105.78 96.197 1 1.494 1.7396 0 433740000 181690000 252050000 22001 1328 8315 8504 34531;34532;34533 34532 LLLGAGAVAYGVR 13 0 1 Unmodified _LLLGAGAVAYGVR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.3815 2 630.377155 1258.73976 77255.01 0.62886 0.00039642 -0.26951 -0.00016989 0.35936 0.00022653 630.376836163438 635.381126065272 109.66 1.2044 109.66 109.33 110.53 0 285 60 9 0 0 0 0.0001138 2 63069 77.677 68.09 1 2.4117 2.0446 0 32285000 8867600 23417000 22002 1328 8315 8504 34534;34535 34534 LLLGAGAVAYGVR 13 0 1 Unmodified _LLLGAGAVAYGVR_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6;F5H0C5;F5H2D2 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.3771 2 630.377155 1258.73976 77020.9 0.75684 0.0004771 -0.3078 -0.00019403 0.44905 0.00028307 630.376833279252 635.381091874573 109.47 1.1898 109.47 109.18 110.37 0 242 58 8 0 0 0 0.00012299 2 62052 77.677 68.09 1 2.4753 2.1592 0 31806000 8598700 23207000 22003 1328 8315 8504 34536;34537 34537 LLLGDLAPVR 10 0 1 Unmodified _LLLGDLAPVR_ 0 0 0 B4DRU9;A0A0S2Z5L1;Q9NUQ8 B4DRU9 B4DRU9 ABCF3 ATP-binding cassette sub-family F member 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.8388 2 533.834591 1065.65463 84564.88 0.78908 0.00042124 0.063066 3.3667E-05 0.85214 0.0004549 533.834750620102 538.838627505343 104.72 0.63818 104.72 104.46 105.1 0 126 51 4 0 0 0 0.00024981 1 66541 92.439 37.89 1 1.5281 1.5095 0 15010000 4889900 10120000 22004 583 8316 8505 34538 34538 LLLIATGK 8 1 0 Unmodified _LLLIATGK_ 0 0 0 B4DSL6;A8K5D9;A0A024RA49;Q9NQW6;H7C1K5 B4DSL6 B4DSL6 ANLN Actin-binding protein anillin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.7887 2 414.781296 827.54804 NaN NaN NaN 0.17384 7.2105E-05 NaN NaN NaN NaN 75.003 0.40853 75.003 74.833 75.241 0 0 0 0 0.014272 1 44025 70.69 21.1 1 NaN NaN 0 6176400 0 6176400 22005 294 8317 8506 34539 34539 LLLIATGK 8 1 0 Unmodified _LLLIATGK_ 0 0 0 B4DSL6;A8K5D9;A0A024RA49;Q9NQW6;H7C1K5 B4DSL6 B4DSL6 ANLN Actin-binding protein anillin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.7885 2 414.781296 827.54804 98571.88 0.039291 1.6297E-05 0.097946 4.0626E-05 0.13724 5.6924E-05 414.781315040521 418.788406644721 73.618 0.51418 73.618 73.372 73.886 0 113 43 4 0 0 0 0.0087497 1 44139 77.282 27.258 1 2.3002 2.4031 0 10123000 3489300 6633300 22006 294 8317 8506 34540 34540 LLLIDWPELK 10 1 0 Unmodified _LLLIDWPELK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.3784 2 620.371007 1238.72746 78540.27 1.084 0.00067249 0.38627 0.00023963 1.4703 0.00091212 620.370795025427 624.378641013774 126.7 0.65045 126.7 126.44 127.09 -7.6294E-06 190 43 6 0 0 0 0.00021583 2 82363 93.551 82.721 1 1.0453 1.0664 0 10429000 4515600 5913600 22007 684 8318 8507 34541;34542 34542 LLLIDWPELK 10 1 0 Unmodified _LLLIDWPELK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.8803 2 620.371007 1238.72746 78711.13 0.74441 0.00046181 0.61852 0.00038371 1.3629 0.00084552 620.371081256763 624.37923261094 126.24 0.67909 126.24 126.02 126.7 7.6294E-06 160 41 6 0 0 0 0.0073167 2 84049 57.598 57.598 1 1.0382 1.0708 0 11512000 5764300 5747800 22008 684 8318 8507 34543;34544 34544 LLLIGDSGVGK 11 1 0 Unmodified _LLLIGDSGVGK_ 0 0 0 P61026;Q53SX4;H0YLJ8;H0YL94;G5ELZ6;G5ELZ5;G5EMR8;P59190;E9PLD0;Q9H0U4;B7Z8M7;Q6FIG4;Q5U0I6;P62820;Q9H1C9;B3KTE3;H0YMN7;Q59EP4;E7END7;H0YNE9;B4DMS1;Q92928;Q92930;A0A024R7I3;P61006;A0A024RB27;Q504R6;P51153;D3DV69 P61026;E9PLD0;A0A024R7I3;A0A024RB27 E9PLD0 RAB10;RAB8B;RAB15;RAB1B;RAB1A;RAB1C;RAB8A;hCG_24991;RAB13;hCG_1996054 Ras-related protein Rab-10;Ras-related protein Rab-15;Ras-related protein Rab-1B;Ras-related protein Rab-1A;Putative Ras-related protein Rab-1C;Ras-related protein Rab-8B;Ras-related protein Rab-8A;Ras-related protein Rab-13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.3314 2 536.324057 1070.63356 82284.66 0.84935 0.00045553 0.061433 3.2948E-05 0.91079 0.00048848 536.324016459721 540.331094683285 86.942 0.36703 86.942 86.763 87.13 0 138 25 8 0 0 0 1.8777E-05 2 52374 105.4 0 1 1.6965 2.0026 0 364170000 133510000 230660000 22009 1246;226;1627;322 8319 8508 34545;34546 34545 LLLIGDSGVGK 11 1 0 Unmodified _LLLIGDSGVGK_ 0 0 0 P61026;Q53SX4;H0YLJ8;H0YL94;G5ELZ6;G5ELZ5;G5EMR8;P59190;E9PLD0;Q9H0U4;B7Z8M7;Q6FIG4;Q5U0I6;P62820;Q9H1C9;B3KTE3;H0YMN7;Q59EP4;E7END7;H0YNE9;B4DMS1;Q92928;Q92930;A0A024R7I3;P61006;A0A024RB27;Q504R6;P51153;D3DV69 P61026;E9PLD0;A0A024R7I3;A0A024RB27 E9PLD0 RAB10;RAB8B;RAB15;RAB1B;RAB1A;RAB1C;RAB8A;hCG_24991;RAB13;hCG_1996054 Ras-related protein Rab-10;Ras-related protein Rab-15;Ras-related protein Rab-1B;Ras-related protein Rab-1A;Putative Ras-related protein Rab-1C;Ras-related protein Rab-8B;Ras-related protein Rab-8A;Ras-related protein Rab-13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.3242 2 536.324057 1070.63356 81863.15 0.86511 0.00046398 0.066314 3.5566E-05 0.93142 0.00049954 536.32400652901 540.331108715819 85.836 0.527 85.836 85.664 86.191 0 166 40 8 0 0 0 7.3675E-08 2 52889 113.66 0 1 1.6588 1.9535 0 492750000 188100000 304650000 22010 1246;226;1627;322 8319 8508 34547;34548 34548 LLLIGDSGVGK 11 1 0 Unmodified _LLLIGDSGVGK_ 0 0 0 P61026;Q53SX4;H0YLJ8;H0YL94;G5ELZ6;G5ELZ5;G5EMR8;P59190;E9PLD0;Q9H0U4;B7Z8M7;Q6FIG4;Q5U0I6;P62820;Q9H1C9;B3KTE3;H0YMN7;Q59EP4;E7END7;H0YNE9;B4DMS1;Q92928;Q92930;A0A024R7I3;P61006;A0A024RB27;Q504R6;P51153;D3DV69 P61026;E9PLD0;A0A024R7I3;A0A024RB27 E9PLD0 RAB10;RAB8B;RAB15;RAB1B;RAB1A;RAB1C;RAB8A;hCG_24991;RAB13;hCG_1996054 Ras-related protein Rab-10;Ras-related protein Rab-15;Ras-related protein Rab-1B;Ras-related protein Rab-1A;Putative Ras-related protein Rab-1C;Ras-related protein Rab-8B;Ras-related protein Rab-8A;Ras-related protein Rab-13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.3314 2 536.324057 1070.63356 83265.84 0.63142 0.00033865 0.092373 4.9542E-05 0.7238 0.00038819 536.324026061332 540.331057737483 99.11 0.70969 99.11 98.789 99.498 -7.6294E-06 183 39 7 0 0 0 0.0070376 2 55922 53.327 0 1 1.1017 0.86781 0 10960000 4930300 6029400 22011 1246;226;1627;322 8319 8508 34549;34550 34549 LLLIGDSGVGK 11 1 0 Unmodified _LLLIGDSGVGK_ 0 0 0 P61026;Q53SX4;H0YLJ8;H0YL94;G5ELZ6;G5ELZ5;G5EMR8;P59190;E9PLD0;Q9H0U4;B7Z8M7;Q6FIG4;Q5U0I6;P62820;Q9H1C9;B3KTE3;H0YMN7;Q59EP4;E7END7;H0YNE9;B4DMS1;Q92928;Q92930;A0A024R7I3;P61006;A0A024RB27;Q504R6;P51153;D3DV69 P61026;E9PLD0;A0A024R7I3;A0A024RB27 E9PLD0 RAB10;RAB8B;RAB15;RAB1B;RAB1A;RAB1C;RAB8A;hCG_24991;RAB13;hCG_1996054 Ras-related protein Rab-10;Ras-related protein Rab-15;Ras-related protein Rab-1B;Ras-related protein Rab-1A;Putative Ras-related protein Rab-1C;Ras-related protein Rab-8B;Ras-related protein Rab-8A;Ras-related protein Rab-13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.3314 2 536.324057 1070.63356 83664.51 0.58459 0.00031353 0.032795 1.7589E-05 0.61738 0.00033112 536.323976147464 540.331095853257 98.907 0.62991 98.907 98.624 99.254 0 172 36 7 0 0 0 0.00059163 2 54946 73.985 0 1 1.081 0.8892 0 10152000 5050200 5102000 22012 1246;226;1627;322 8319 8508 34551;34552 34551 LLLIPQGAILR 11 0 1 Unmodified _LLLIPQGAILR_ 0 0 0 Q9ULM3 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.9009 2 603.900266 1205.78598 84748.34 0.75067 0.00045333 0.12116 7.3168E-05 0.87183 0.0005265 603.900347354639 608.904373716619 116.73 0.3254 116.73 116.58 116.9 -7.6294E-06 66 22 4 0 0 0 0.0019524 1 74604 63.565 63.565 1 0.80264 0.83477 0 5397900 3884600 1513200 22013 2110 8320 8509 34553 34553 LLLIPQGAILR 11 0 1 Unmodified _LLLIPQGAILR_ 0 0 0 Q9ULM3 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.9052 2 603.900266 1205.78598 NaN NaN NaN 0.13727 8.29E-05 NaN NaN NaN NaN 128.51 0.32611 128.51 128.37 128.69 0 0 0 0 0.026061 1 77653 51.346 19.125 1 NaN NaN 0 536460 0 536460 22014 2110 8320 8509 34554 34554 LLLIQAFRPDR 11 0 2 Unmodified _LLLIQAFRPDR_ 0 0 1 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.9378 3 447.938228 1340.79285 91174.04 0.20431 9.152E-05 -0.43169 -0.00019337 -0.22738 -0.00010185 448.271869633368 454.610308952945 97.414 0.7895 97.414 96.959 97.749 0 126 70 5 0 0 0 0.031042 1 59317 32.329 10.098 1 1.3147 1.4181 0 17271000 3836200 13435000 22015 1729 8321 8510 34555 34555 LLLLDTQQEAGMLLR 15 0 1 Oxidation (M) _LLLLDTQQEAGM(ox)LLR_ LLLLDTQQEAGM(1)LLR LLLLDTQQEAGM(115.33)LLR 0 1 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 870.9838 2 865.479479 1728.94441 NaN NaN NaN -0.40797 -0.00035309 NaN NaN NaN NaN 116.31 0.58919 116.31 115.95 116.54 -7.6294E-06 0 0 0 2.412E-11 1 74105 115.33 96.084 1 NaN NaN 0 7360900 0 7360900 22016 1776 8322 8511 34556 34556 1648 LLLLDTQQEAGMLLR 15 0 1 Oxidation (M) _LLLLDTQQEAGM(ox)LLR_ LLLLDTQQEAGM(1)LLR LLLLDTQQEAGM(125.22)LLR 0 1 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.4842 2 865.479479 1728.94441 NaN NaN NaN 0.023001 1.9907E-05 NaN NaN NaN NaN 115.71 0.54948 115.71 115.44 115.99 0 0 0 0 2.1046E-16 1 75534 125.22 108.58 1 NaN NaN 0 9936600 0 9936600 22017 1776 8322 8511 34557 34557 1648 LLLLESVSGLLQPR 14 0 1 Unmodified _LLLLESVSGLLQPR_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8;I3L445;I3L1P4;I3L4M7 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.4702 2 769.469241 1536.92393 71529.28 1.0273 0.00079045 -0.01022 -7.8639E-06 1.0171 0.00078259 769.469662411341 774.473334365739 132.29 0.63991 132.29 132.02 132.66 0 197 42 6 0 0 0 8.7874E-05 1 86281 87.298 87.298 1 1.0551 1.0862 0 6325200 2923400 3401800 22018 746 8323 8512 34558 34558 LLLLESVSGLLQPR 14 0 1 Unmodified _LLLLESVSGLLQPR_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8;I3L445;I3L1P4;I3L4M7 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.4702 2 769.469241 1536.92393 71568.77 0.90231 0.0006943 0.32654 0.00025126 1.2288 0.00094556 769.469666355113 774.473455540647 131.83 0.64148 131.83 131.58 132.23 0 181 44 6 0 0 0 2.4912E-09 1 88192 116.23 116.23 1 1.1028 1.0961 0 8489700 3248500 5241200 22019 746 8323 8512 34559 34559 LLLLGAGESGK 11 1 0 Unmodified _LLLLGAGESGK_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;Q5JWE9;H0Y7F4;A0A087WTB6;A2A2R6;Q5JWD1;H0Y7E8;A0A087WZE5;A0A024R2Z1;Q8N2B4;Q5T697;A8K1Y9;P11488;P19087;A8MTJ3;P38405;P08754;A0A142CHG9;P63096;P04899;Q93020;B3KP89;P09471 Q5FWY2;P08754 Q5FWY2 GNAS;GNAO1;GNAT2;GNAT1;GNAL;GNAT3;GNAI3;GNAI1;GNAI2;WUGSC:H_LUCA16.1 Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(olf) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.3232 2 529.316232 1056.61791 84236.91 0.49254 0.00026071 0.040318 2.1341E-05 0.53286 0.00028205 529.316215541425 533.323272439301 78.838 0.822 78.838 78.396 79.218 -7.6294E-06 244 74 5 0 0 0 0.00036511 1 46741 84.213 0 1 1.7163 1.8368 0 32385000 11129000 21256000 22020 549;1458 8324 8513 34560 34560 LLLLGAGESGK 11 1 0 Unmodified _LLLLGAGESGK_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;Q5JWE9;H0Y7F4;A0A087WTB6;A2A2R6;Q5JWD1;H0Y7E8;A0A087WZE5;A0A024R2Z1;Q8N2B4;Q5T697;A8K1Y9;P11488;P19087;A8MTJ3;P38405;P08754;A0A142CHG9;P63096;P04899;Q93020;B3KP89;P09471 Q5FWY2;P08754 Q5FWY2 GNAS;GNAO1;GNAT2;GNAT1;GNAL;GNAT3;GNAI3;GNAI1;GNAI2;WUGSC:H_LUCA16.1 Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(olf) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.8447 2 529.316232 1056.61791 83765.77 0.60392 0.00031966 0.016351 8.655E-06 0.62027 0.00032832 529.316136728275 533.323218745595 77.589 0.82481 77.589 77.166 77.991 0 281 68 6 0 0 0 0.0080807 1 46812 51.445 0 1 1.6578 1.729 0 34117000 12751000 21366000 22021 549;1458 8324 8513 34561 34561 LLLLGAGESGK 11 1 0 Unmodified _LLLLGAGESGK_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;Q5JWE9;H0Y7F4;A0A087WTB6;A2A2R6;Q5JWD1;H0Y7E8;A0A087WZE5;A0A024R2Z1;Q8N2B4;Q5T697;A8K1Y9;P11488;P19087;A8MTJ3;P38405;P08754;A0A142CHG9;P63096;P04899;Q93020;B3KP89;P09471 Q5FWY2;P08754 Q5FWY2 GNAS;GNAO1;GNAT2;GNAT1;GNAL;GNAT3;GNAI3;GNAI1;GNAI2;WUGSC:H_LUCA16.1 Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(olf) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.3234 2 529.316232 1056.61791 80727.58 0.55966 0.00029624 0.33921 0.00017955 0.89887 0.00047579 529.316238357618 533.323565898047 89.22 0.86956 89.22 88.661 89.53 0 143 57 4 0 0 0 0.0081792 2 49233 51.268 0 1 1.2012 0.98416 0 2571900 1130400 1441500 22022 549;1458 8324 8513 34562;34563 34562 LLLLGAGESGK 11 1 0 Unmodified _LLLLGAGESGK_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;Q5JWE9;H0Y7F4;A0A087WTB6;A2A2R6;Q5JWD1;H0Y7E8;A0A087WZE5;A0A024R2Z1;Q8N2B4;Q5T697;A8K1Y9;P11488;P19087;A8MTJ3;P38405;P08754;A0A142CHG9;P63096;P04899;Q93020;B3KP89;P09471 Q5FWY2;P08754 Q5FWY2 GNAS;GNAO1;GNAT2;GNAT1;GNAL;GNAT3;GNAI3;GNAI1;GNAI2;WUGSC:H_LUCA16.1 Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(olf) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.3225 2 529.316232 1056.61791 NaN NaN NaN 0.41377 0.00021901 NaN NaN NaN NaN 89.193 0.78291 89.193 88.734 89.517 0 0 0 0 0.038372 1 48340 47.706 0 1 NaN NaN 0 1310900 0 1310900 22023 549;1458 8324 8513 34564 34564 LLLLQK 6 1 0 Unmodified _LLLLQK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;O75052 F5GWX5 F5GWX5 CHD4;NOS1AP Chromodomain-helicase-DNA-binding protein 4;Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 364.2572 2 364.257457 726.500361 99044.29 -0.11095 -4.0415E-05 0.1245 4.535E-05 0.013547 4.9347E-06 364.257425604801 368.264456562928 67.191 0.96411 67.191 66.806 67.77 0 317 77 7 0 0 0 0.034273 1 38717 112.58 0 1 0.74371 0.83602 0 70358000 40573000 29785000 22024 515 8325 8514 34565 34565 LLLLQK 6 1 0 Unmodified _LLLLQK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;O75052 F5GWX5 F5GWX5 CHD4;NOS1AP Chromodomain-helicase-DNA-binding protein 4;Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 368.2646 2 364.257457 726.500361 99343.02 -0.094526 -3.4432E-05 -0.0042089 -1.5331E-06 -0.098735 -3.5965E-05 364.257372852178 368.264423622657 76.276 0.76403 76.276 75.85 76.614 -7.6294E-06 202 51 6 0 0 0 0.050046 1 39756 74.849 0 1 1.7395 1.4313 0 10266000 3127200 7138400 22025 515 8325 8514 34566 34566 LLLNLISQVGR 11 0 1 Unmodified _LLLNLISQVGR_ 0 0 0 F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 F2Z2U4 F2Z2U4 TRRAP Transformation/transcription domain-associated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.3902 2 613.38498 1224.75541 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.5 1 116.5 116 117 7.6294E-06 0 0 0 1.2721E-05 1 74387 92.838 63.028 1 22026 1253 8326 8515 34567 34567 LLLNLISQVGR 11 0 1 Unmodified _LLLNLISQVGR_ 0 0 0 F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 F2Z2U4 F2Z2U4 TRRAP Transformation/transcription domain-associated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.389 2 613.38498 1224.75541 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.95 1 115.95 115.45 116.45 0 0 0 0 3.1676E-06 1 75762 98.249 50.4 1 22027 1253 8326 8515 34568 34568 LLLNNDNLLR 10 0 1 Unmodified _LLLNNDNLLR_ 0 0 0 A8K0T9;A0A024R0E5;P52907;Q53GE2;Q53GC7;A4D0V4;P47755;C9JUG7;F8W9N7;A0A0D9SET8 A8K0T9;Q53GE2 A8K0T9 CAPZA1;CAPZA2 F-actin-capping protein subunit alpha-1;F-actin-capping protein subunit alpha-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.3575 2 599.351137 1196.68772 80329.56 0.62971 0.00037742 0.20331 0.00012185 0.83302 0.00049927 599.351231399512 604.355366552327 91.543 0.55746 91.543 91.242 91.799 0 218 48 6 0 0 0 2.4826E-06 1 56689 110.87 92.61 1 1.1853 1.3685 0 55557000 24226000 31331000 22028 43;659 8327 8516 34569 34569 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3053 2 477.305136 952.595718 87616.04 0.2201 0.00010505 0.17588 8.3949E-05 0.39598 0.000189 477.306164254595 481.311909786338 88.92 0.97356 88.92 88.763 89.737 0 396 80 5 0 0 0 0.0013017 2 53929 87.181 15.043 1 0.75062 0.92719 0 6815100000 3833500000 2981600000 22029 34;1513 8328 8517 34570;34571 34570 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3126 2 477.305136 952.595718 86630.86 0.30575 0.00014593 0.60874 0.00029056 0.91449 0.00043649 477.305289893967 481.31243201661 90.205 1.3001 90.205 89.335 90.636 0 568 110 8 0 0 0 0.0022212 2 54415 75.213 15.078 1 0.82551 0.97943 0 505680000 271860000 233820000 22030 34;1513 8328 8517 34572;34573 34573 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3051 2 477.305136 952.595718 86630.83 0.59402 0.00028353 0.23711 0.00011317 0.83113 0.0003967 477.305184610466 481.312226023855 90.95 1.3765 90.95 90.603 91.98 -7.6294E-06 712 113 8 0 0 0 0.00085808 4 54919 93.374 16.297 1 0.8309 0.98834 0 596420000 341410000 255010000 22031 34;1513 8328 8517 34574;34575;34576;34577 34574 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 87138.73 0.32156 0.00015348 0.25315 0.00012083 0.5747 0.00027431 477.305157633359 481.312296087716 92.38 1.0822 92.38 91.88 92.963 0 493 102 7 0 0 0 0.0060191 1 55986 65.252 15.894 1 0.85222 0.99064 0 252070000 136810000 115260000 22032 34;1513 8328 8517 34578 34578 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3049 2 477.305136 952.595718 87361.93 0.3406 0.00016257 0.26961 0.00012868 0.6102 0.00029125 477.305138492823 481.312263176157 93.736 3.3541 93.736 93.443 96.797 0 749 291 8 0 0 0 0.0013285 5 58562 86.833 24.116 1 0.83495 0.96505 0 225870000 126180000 99692000 22033 34;1513 8328 8517 34579;34580;34581;34582;34583 34583 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3049 2 477.305136 952.595718 87697.38 0.20507 9.7882E-05 -0.046972 -2.242E-05 0.1581 7.5462E-05 477.305014782453 481.312154114095 97.188 0.66132 97.188 96.797 97.458 7.6294E-06 171 59 4 0 0 0 0.0012636 2 59097 87.696 8.5307 1 0.83826 0.94349 0 72862000 36763000 36099000 22034 34;1513 8328 8517 34584;34585 34584 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3121 2 477.305136 952.595718 87138.72 0.29275 0.00013973 0.074421 3.5521E-05 0.36717 0.00017525 477.30512788016 481.312183448519 97.651 1.0691 97.651 97.133 98.202 0 304 89 5 0 0 0 0.001453 2 59637 85.212 6.0404 1 0.79318 0.89385 0 126760000 70579000 56186000 22035 34;1513 8328 8517 34586;34587 34586 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 87376.74 0.34645 0.00016536 0.2914 0.00013909 0.63785 0.00030445 477.305163418292 481.312288244984 98.491 1.418 98.491 98.176 99.594 0 529 116 6 0 0 0 0.001453 3 60719 85.212 5.7674 1 0.79021 0.8913 0 131590000 71106000 60483000 22036 34;1513 8328 8517 34588;34589;34590 34590 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3053 2 477.305136 952.595718 87376.73 0.15348 7.3256E-05 0.19198 9.1635E-05 0.34546 0.00016489 477.305147193278 481.312319951763 99.896 1.1546 99.896 99.08 100.23 0 310 97 6 0 0 0 0.002701 3 61423 73.665 9.2139 1 0.84464 0.95797 0 95511000 51946000 43565000 22037 34;1513 8328 8517 34591;34592;34593 34593 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 87138.72 0.33464 0.00015973 0.095061 4.5373E-05 0.4297 0.0002051 477.30503169119 481.312215390846 100.69 0.78316 100.69 100.22 101.01 7.6294E-06 232 59 7 0 0 0 0.0022212 1 61817 75.213 6.2978 1 0.80313 0.90765 0 83370000 42481000 40890000 22038 34;1513 8328 8517 34594 34594 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3122 2 477.305136 952.595718 87376.73 0.32086 0.00015315 0.17346 8.2793E-05 0.49432 0.00023594 477.305071043685 481.312224015101 101.07 1.0381 101.07 100.86 101.89 7.6294E-06 325 79 6 0 0 0 0.0022212 2 62400 75.213 14.453 1 0.82966 0.92898 0 64301000 45123000 19177000 22039 34;1513 8328 8517 34595;34596 34596 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3052 2 477.305136 952.595718 87616.04 0.27592 0.0001317 0.20445 9.7587E-05 0.48038 0.00022929 477.305113988493 481.312228487719 104.93 1.4648 104.93 104.26 105.73 0 393 118 5 0 0 0 0.0017538 2 64798 81.296 24.015 1 0.8584 0.89855 0 30122000 15509000 14612000 22040 34;1513 8328 8517 34597;34598 34598 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.312 2 477.305136 952.595718 88266.2 0.21689 0.00010352 0.12385 5.9115E-05 0.34074 0.00016264 477.305058179989 481.312206602492 108.19 1.0018 108.19 107.44 108.44 0 276 74 6 0 0 0 0.0022292 3 67665 75.109 16.292 1 0.83626 0.90351 0 35189000 17216000 17973000 22041 34;1513 8328 8517 34599;34600;34601 34601 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 87697.4 0.56869 0.00027144 0.088068 4.2035E-05 0.65676 0.00031347 477.305035958573 481.312190677671 108.59 0.95514 108.59 108.32 109.27 0 263 64 6 0 0 0 0.0052629 2 68270 67.169 12.964 1 0.79122 0.85453 0 42257000 22356000 19901000 22042 34;1513 8328 8517 34602;34603 34603 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3125 2 477.305136 952.595718 88263.28 0.15797 7.54E-05 0.15092 7.2034E-05 0.30889 0.00014743 477.305113646062 481.312212482231 109.52 0.92245 109.52 109.03 109.96 0 241 66 5 0 0 0 0.016329 1 68885 53.968 3.8413 1 0.80844 0.87449 0 36208000 22258000 13950000 22043 34;1513 8328 8517 34604 34604 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3126 2 477.305136 952.595718 87697.39 0.56478 0.00026957 0.0065589 3.1306E-06 0.57134 0.00027271 477.305068522471 481.312191611997 110.44 1.6231 110.44 109.89 111.52 0 260 112 4 0 0 0 0.0028606 3 69524 73.26 15.979 1 0.79183 0.86294 0 49688000 26464000 23224000 22044 34;1513 8328 8517 34605;34606;34607 34606 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 88263.27 0.37318 0.00017812 -0.047429 -2.2638E-05 0.32575 0.00015548 477.305017775517 481.312134841833 113.48 1.5212 113.48 112.9 114.42 0 319 110 5 0 0 0 0.0022212 3 72023 75.213 14.453 1 0.87288 0.8553 0 21371000 13063000 8307600 22045 34;1513 8328 8517 34608;34609;34610 34609 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3127 2 477.305136 952.595718 87697.38 0.32832 0.00015671 -0.045737 -2.183E-05 0.28258 0.00013488 477.30499314521 481.312144572686 123.56 2.8951 123.56 122.45 125.35 0 586 207 4 0 0 0 0.0014644 6 80323 85.064 6.5781 1 0.82604 0.85526 0 11182000 6131800 5050200 22046 34;1513 8328 8517 34611;34612;34613;34614;34615;34616 34612 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 87697.38 0.54332 0.00025933 -0.17422 -8.3155E-05 0.3691 0.00017617 477.304922072788 481.312080827261 126.35 2.1149 126.35 125.16 127.27 0 396 144 4 0 0 0 0.0021719 4 82030 75.854 12.544 1 0.82269 0.8103 0 9142200 4742900 4399400 22047 34;1513 8328 8517 34617;34618;34619;34620 34618 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3055 2 477.305136 952.595718 88025.75 0.43539 0.00020782 -0.075019 -3.5807E-05 0.36038 0.00017201 477.305024038461 481.312172575478 131.91 2.5249 131.91 130.86 133.39 0 427 149 4 0 0 0 0.0074668 3 86703 61.962 15.537 1 0.80814 0.82429 0 10422000 5598300 4824100 22048 34;1513 8328 8517 34621;34622;34623 34622 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3139 2 477.305136 952.595718 87709.89 -0.0081981 -3.913E-06 -0.091538 -4.3691E-05 -0.099736 -4.7604E-05 477.305058106378 481.31215108838 136.95 0.37584 136.95 136.68 137.05 0 138 37 5 0 0 0 0.0066845 1 88996 63.565 6.2841 1 0.73676 0.7238 0 8734300 4571700 4162600 22049 34;1513 8328 8517 34624 34624 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3122 2 477.305136 952.595718 87357.01 0.0086793 4.1427E-06 0.030348 1.4485E-05 0.039028 1.8628E-05 477.304980662916 481.312145639233 137.69 0.73523 137.69 137.14 137.87 1.5259E-05 242 73 6 0 0 0 0.020055 1 89267 50.607 7.3604 1 0.86192 0.86483 0 9878300 5239500 4638900 22050 34;1513 8328 8517 34625 34625 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3056 2 477.305136 952.595718 86802.38 0.050665 2.4183E-05 0.22198 0.00010595 0.27265 0.00013014 477.305197259437 481.312330932701 139.15 0.80414 139.15 138.56 139.36 0 317 91 5 0 0 0 0.0039394 1 89624 70.525 5.7674 1 0.82744 0.82662 0 9740600 5312300 4428200 22051 34;1513 8328 8517 34626 34626 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3052 2 477.305136 952.595718 87253.79 0.088279 4.2136E-05 0.15337 7.3204E-05 0.24165 0.00011534 477.305058430345 481.312177747482 139.75 2.6022 139.75 139.36 141.96 0 783 288 6 0 0 0 0.0016071 4 89794 83.206 14.291 1 0.82815 0.84558 0 10458000 6035900 4422400 22052 34;1513 8328 8517 34627;34628;34629;34630 34627 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3051 2 477.305136 952.595718 87291.66 0.33058 0.00015779 -0.14916 -7.1193E-05 0.18143 8.6596E-05 477.304945592295 481.312064216824 142.59 3.5839 142.59 141.55 145.14 0 1605 380 7 0 0 0 0.0013315 6 90532 86.794 15.158 1 0.82592 0.87288 0 31072000 17517000 13555000 22053 34;1513 8328 8517 34631;34632;34633;34634;34635;34636 34632 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 87709.86 0.56442 0.0002694 -0.48674 -0.00023232 0.077683 3.7078E-05 477.304787803254 481.311951693766 145.27 0.92725 145.27 144.87 145.8 0 243 73 5 0 0 0 0.017716 1 91302 52.716 6.2903 1 0.79994 0.78411 0 20883000 11116000 9767500 22054 34;1513 8328 8517 34637 34637 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3054 2 477.305136 952.595718 NaN NaN NaN 0.45202 0.00021575 NaN NaN NaN NaN 87.105 2.3603 87.105 86.975 89.335 0 0 0 0 0.0017621 3 52532 84.368 15.771 1 NaN NaN 0 15155000000 15155000000 0 22055 34;1513 8328 8517 34638;34639;34640 34638 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN 0.18327 8.7475E-05 NaN NaN NaN NaN 96.314 1.6559 96.314 95.141 96.797 -7.6294E-06 0 0 0 0.0016353 2 58045 85.064 18.382 1 NaN NaN 0 80601000 0 80601000 22056 34;1513 8328 8517 34641;34642 34641 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN 0.25576 0.00012207 NaN NaN NaN NaN 102.77 1.6377 102.77 101.73 103.37 0 0 0 0 0.0016084 2 63513 85.212 16.297 1 NaN NaN 0 33570000 0 33570000 22057 34;1513 8328 8517 34643;34644 34644 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN 0.20653 9.858E-05 NaN NaN NaN NaN 103.51 0.93274 103.51 103.33 104.26 0 0 0 0 0.0050184 1 64072 75.213 14.453 1 NaN NaN 0 27889000 0 27889000 22058 34;1513 8328 8517 34645 34645 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3052 2 477.305136 952.595718 NaN NaN NaN 0.19894 9.4953E-05 NaN NaN NaN NaN 104.14 0.4808 104.14 103.8 104.28 7.6294E-06 0 0 0 0.015327 1 64235 62.546 3.5651 1 NaN NaN 0 13919000 13919000 0 22059 34;1513 8328 8517 34646 34646 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3054 2 477.305136 952.595718 NaN NaN NaN 0.1008 4.811E-05 NaN NaN NaN NaN 105.71 1.5703 105.71 105.26 106.83 -7.6294E-06 0 0 0 0.0057721 2 66012 73.665 12.915 1 NaN NaN 0 25210000 25210000 0 22060 34;1513 8328 8517 34647;34648 34648 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3055 2 477.305136 952.595718 NaN NaN NaN -0.0035826 -1.71E-06 NaN NaN NaN NaN 107.32 0.98441 107.32 106.82 107.81 0 0 0 0 0.0077375 1 66629 69.628 8.8677 1 NaN NaN 0 18053000 18053000 0 22061 34;1513 8328 8517 34649 34649 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3055 2 477.305136 952.595718 NaN NaN NaN -0.047117 -2.2489E-05 NaN NaN NaN NaN 111.76 1.6052 111.76 110.66 112.27 0 0 0 0 0.0047061 2 69713 75.854 7.4327 1 NaN NaN 0 17940000 17940000 0 22062 34;1513 8328 8517 34650;34651 34650 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3052 2 477.305136 952.595718 NaN NaN NaN -0.1564 -7.465E-05 NaN NaN NaN NaN 112.63 0.64893 112.63 112.25 112.9 0 0 0 0 0.0057721 1 70993 73.665 16.384 1 NaN NaN 0 7596800 7596800 0 22063 34;1513 8328 8517 34652 34652 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3053 2 477.305136 952.595718 NaN NaN NaN -0.1354 -6.4627E-05 NaN NaN NaN NaN 118.55 5.5035 118.55 114.35 119.85 0 0 0 0 0.005969 7 74457 73.26 15.537 1 NaN NaN 0 13833000 13833000 0 22064 34;1513 8328 8517 34653;34654;34655;34656;34657;34658;34659 34655 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3054 2 477.305136 952.595718 NaN NaN NaN -0.29351 -0.0001401 NaN NaN NaN NaN 121.66 2.6053 121.66 119.85 122.45 0 0 0 0 0.013135 2 77619 64.265 6.9836 1 NaN NaN 0 12345000 12345000 0 22065 34;1513 8328 8517 34660;34661 34660 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN -0.21052 -0.00010048 NaN NaN NaN NaN 121.87 0.82141 121.87 121.63 122.45 0 0 0 0 0.013135 1 79159 64.265 6.9836 1 NaN NaN 0 10211000 0 10211000 22066 34;1513 8328 8517 34662 34662 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.312 2 477.305136 952.595718 NaN NaN NaN 0.017757 8.4755E-06 NaN NaN NaN NaN 122.83 0.83113 122.83 122.33 123.16 0 0 0 0 0.013135 1 79750 64.265 9.7152 1 NaN NaN 0 6340000 0 6340000 22067 34;1513 8328 8517 34663 34663 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3051 2 477.305136 952.595718 NaN NaN NaN -0.12571 -6.0002E-05 NaN NaN NaN NaN 127.47 0.68076 127.47 127.11 127.79 0 0 0 0 0.0068846 1 82942 71.379 10.62 1 NaN NaN 0 3784500 3784500 0 22068 34;1513 8328 8517 34664 34664 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3053 2 477.305136 952.595718 NaN NaN NaN -0.045499 -2.1717E-05 NaN NaN NaN NaN 128.19 1.0508 128.19 127.74 128.79 0 0 0 0 0.0366 1 83704 51.346 14.951 1 NaN NaN 0 3703200 3703200 0 22069 34;1513 8328 8517 34665 34665 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.305 2 477.305136 952.595718 NaN NaN NaN -0.13528 -6.457E-05 NaN NaN NaN NaN 137.08 0.44173 137.08 137.01 137.45 0 0 0 0 0.035023 1 89135 51.854 7.4073 1 NaN NaN 0 6436100 6436100 0 22070 34;1513 8328 8517 34666 34666 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3122 2 477.305136 952.595718 NaN NaN NaN 0.08204 3.9158E-05 NaN NaN NaN NaN 139.53 0.32928 139.53 139.36 139.69 1.5259E-05 0 0 0 0.0055468 1 89810 74.127 7.4454 1 NaN NaN 0 4927700 0 4927700 22071 34;1513 8328 8517 34667 34667 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3121 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.32 1 105.32 104.82 105.82 7.6294E-06 0 0 0 0.015002 1 65204 58.815 4.6101 1 22072 34;1513 8328 8517 34668 34668 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.09 1 106.09 105.59 106.59 7.6294E-06 0 0 0 0.0093753 1 65827 64.265 14.138 1 22073 34;1513 8328 8517 34669 34669 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.17 1 112.17 111.67 112.67 -7.6294E-06 0 0 0 0.0063761 1 70768 67.169 0.48746 1 22074 34;1513 8328 8517 34670 34670 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3127 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.94 1 112.94 112.44 113.44 0 0 0 0 0.0033111 1 71409 72.485 5.8027 1 22075 34;1513 8328 8517 34671 34671 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3125 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.08 1 116.08 115.58 116.58 7.6294E-06 0 0 0 0.011714 1 74034 61.999 5.9886 1 22076 34;1513 8328 8517 34672 34672 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.84 1 116.84 116.34 117.34 -7.6294E-06 0 0 0 0.0032648 1 74681 73.26 4.3452 1 22077 34;1513 8328 8517 34673 34673 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.61 1 117.61 117.11 118.11 7.6294E-06 0 0 0 0.026458 1 75310 54.157 6.3086 1 22078 34;1513 8328 8517 34674 34674 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3121 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.15 1 119.15 118.65 119.65 -7.6294E-06 0 0 0 0.0031482 1 76601 75.213 14.453 1 22079 34;1513 8328 8517 34675 34675 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3125 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.97 1 119.97 119.47 120.47 -7.6294E-06 0 0 0 0.030715 1 77266 52.786 4.0301 1 22080 34;1513 8328 8517 34676 34676 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3126 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.74 1 120.74 120.24 121.24 0 0 0 0 0.0033111 1 77887 72.485 5.8027 1 22081 34;1513 8328 8517 34677 34677 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.52 1 121.52 121.02 122.02 0 0 0 0 0.003213 1 78546 74.127 7.4454 1 22082 34;1513 8328 8517 34678 34678 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.17 1 128.17 127.67 128.67 0 0 0 0 0.010186 1 83570 63.48 7.4689 1 22083 34;1513 8328 8517 34679 34679 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3125 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.94 1 128.94 128.44 129.44 0 0 0 0 0.0021879 1 84096 86.953 18.532 1 22084 34;1513 8328 8517 34680 34680 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3052 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.08 1 129.08 128.58 129.58 0 0 0 0 0.024734 1 84175 54.712 8.3614 1 22085 34;1513 8328 8517 34681 34681 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.3129 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.86 1 134.86 134.36 135.36 0 0 0 0 0.016761 1 88364 57.281 6.3151 1 22086 34;1513 8328 8517 34682 34682 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.3054 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.87 1 134.87 134.37 135.37 0 0 0 0 0.035184 1 88365 51.346 1.9873 1 22087 34;1513 8328 8517 34683 34683 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3046 2 477.305136 952.595718 87670.88 0.39421 0.00018816 0.34567 0.00016499 0.73988 0.00035315 477.305197092323 481.312393040115 81.737 1.3314 81.737 81.002 82.334 0 230 116 4 0 0 0 0.034216 1 49895 44.349 2.2402 1 1.1161 1.2368 0 46966000 20734000 26232000 22088 34;1513 8328 8517 34684 34684 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.305 2 477.305136 952.595718 87587.45 0.1585 7.5654E-05 0.47319 0.00022586 0.63169 0.00030151 477.305296637796 481.312347405237 89.3 1.2103 89.3 88.646 89.856 0 562 99 9 0 0 0 0.00079176 3 55340 94.302 16.297 1 0.82425 0.97361 0 1202800000 655630000 547170000 22089 34;1513 8328 8517 34685;34686;34687 34687 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 87326.43 0.47673 0.00022755 0.18849 8.9967E-05 0.66522 0.00031751 477.305167327298 481.312203395612 90.235 1.2363 90.235 89.666 90.902 0 558 105 7 0 0 0 0.001453 2 55796 85.212 16.297 1 0.83192 0.97987 0 513460000 277860000 235600000 22090 34;1513 8328 8517 34688;34689 34688 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3125 2 477.305136 952.595718 87326.44 0.40598 0.00019378 0.29746 0.00014198 0.70344 0.00033575 477.305188554777 481.312278053529 91.252 1.4261 91.252 90.852 92.278 0 435 124 5 0 0 0 0.001453 3 56331 85.212 18.382 1 0.79213 0.93014 0 346710000 180150000 166560000 22091 34;1513 8328 8517 34690;34691;34692 34690 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3121 2 477.305136 952.595718 87456.73 0.27108 0.00012939 0.2332 0.00011131 0.50428 0.0002407 477.305134600656 481.31223923917 92.573 2.1262 92.573 91.285 93.411 0 601 183 6 0 0 0 0.001453 1 57357 85.212 16.297 1 0.85987 1.005 0 285600000 151770000 133820000 22092 34;1513 8328 8517 34693 34693 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3121 2 477.305136 952.595718 87587.45 0.15811 7.5465E-05 0.49504 0.00023629 0.65315 0.00031175 477.305253098152 481.312337456197 93.645 0.66655 93.645 93.071 93.738 7.6294E-06 282 60 7 0 0 0 0.0022212 1 57904 75.213 6.2978 1 0.8649 1.0043 0 226410000 123620000 102790000 22093 34;1513 8328 8517 34694 34694 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.305 2 477.305136 952.595718 87587.43 0.2791 0.00013322 0.24689 0.00011784 0.52599 0.00025106 477.305132867258 481.31227013699 93.95 1.3912 93.95 93.717 95.108 0 468 118 7 0 0 0 0.0015079 3 59063 84.498 12.381 1 0.79338 0.91233 0 174420000 110260000 64158000 22094 34;1513 8328 8517 34695;34696;34697 34697 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.312 2 477.305136 952.595718 87456.72 0.53177 0.00025382 -0.0011011 -5.2558E-07 0.53067 0.00025329 477.305021726215 481.312113712295 95.189 1.0202 95.189 94.688 95.708 0 300 87 6 0 0 0 0.0014644 1 59515 85.064 18.382 1 0.83881 0.94502 0 123550000 65720000 57827000 22095 34;1513 8328 8517 34698 34698 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3048 2 477.305136 952.595718 87326.41 0.32107 0.00015325 -0.032032 -1.5289E-05 0.28904 0.00013796 477.305059794327 481.312099020309 96.076 1.4389 96.076 95.679 97.118 0 409 121 5 0 0 0 0.002124 3 59599 76.478 17.873 1 0.83869 0.96097 0 164480000 89760000 74720000 22096 34;1513 8328 8517 34699;34700;34701 34699 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3052 2 477.305136 952.595718 87326.44 0.26913 0.00012846 0.25272 0.00012062 0.52185 0.00024908 477.305144745358 481.312283137392 97.466 2.3322 97.466 96.742 99.074 -7.6294E-06 499 193 5 0 0 0 0.00080518 4 60614 94.114 21.976 1 0.84562 0.9513 0 120290000 64262000 56029000 22097 34;1513 8328 8517 34702;34703;34704;34705 34702 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 87587.43 0.26592 0.00012692 0.22038 0.00010519 0.4863 0.00023211 477.305161386238 481.312238783238 98.604 1.7233 98.604 97.624 99.347 0 451 145 7 0 0 0 0.0022212 1 61722 75.213 6.2978 1 0.79894 0.893 0 99453000 47262000 52191000 22098 34;1513 8328 8517 34706 34706 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 87456.73 0.23662 0.00011294 0.085946 4.1022E-05 0.32257 0.00015396 477.305083546598 481.312180237524 100.43 2.2535 100.43 99.337 101.59 -7.6294E-06 489 181 6 0 0 0 0.001453 3 62283 85.212 16.297 1 0.81851 0.91721 0 80577000 44077000 36500000 22099 34;1513 8328 8517 34707;34708;34709 34708 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3051 2 477.305136 952.595718 87802.22 -0.097994 -4.6773E-05 0.36494 0.00017419 0.26694 0.00012741 477.305320875874 481.312273609293 101.94 0.44157 101.94 101.59 102.03 0 104 33 6 0 0 0 0.0042933 1 64031 69.628 11.023 1 0.87092 0.97463 0 84221000 43715000 40505000 22100 34;1513 8328 8517 34710 34710 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.305 2 477.305136 952.595718 87670.87 0.26214 0.00012512 0.16399 7.8272E-05 0.42612 0.00020339 477.305194435222 481.312209033611 102.66 2.0321 102.66 102.03 104.06 0 468 165 4 0 0 0 0.0021808 5 64632 75.738 16.276 1 0.86039 0.96671 0 74050000 36855000 37195000 22101 34;1513 8328 8517 34711;34712;34713;34714;34715 34711 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3122 2 477.305136 952.595718 87587.41 0.31605 0.00015085 0.047072 2.2468E-05 0.36312 0.00017332 477.305083259691 481.312152582574 105.3 1.5401 105.3 104.04 105.58 0 431 118 5 0 0 0 0.0052629 3 66396 67.169 6.4095 1 0.84754 0.95457 0 69325000 36908000 32417000 22102 34;1513 8328 8517 34716;34717;34718 34716 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 87802.2 0.31728 0.00015144 0.10552 5.0367E-05 0.4228 0.00020181 477.305074143791 481.312185631056 105.95 1.0386 105.95 105.44 106.48 0 344 76 6 0 0 0 0.0031664 1 67613 72.485 5.8027 1 0.84203 0.94808 0 57677000 31788000 25889000 22103 34;1513 8328 8517 34719 34719 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3049 2 477.305136 952.595718 87802.18 0.31735 0.00015147 -0.034406 -1.6422E-05 0.28294 0.00013505 477.305016718034 481.312113120762 106.61 0.9119 106.61 106.42 107.34 0 317 66 6 0 0 0 0.0042156 2 68212 69.825 14.138 1 0.81242 0.87648 0 38150000 21647000 16503000 22104 34;1513 8328 8517 34720;34721 34720 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3121 2 477.305136 952.595718 88318.78 0.29245 0.00013959 -0.030576 -1.4594E-05 0.26188 0.000125 477.305009649433 481.312118428317 107.82 1.0858 107.82 107.34 108.42 0 335 77 6 0 0 0 0.001453 2 68852 85.212 16.297 1 0.87534 0.91569 0 24227000 11651000 12576000 22105 34;1513 8328 8517 34722;34723 34723 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3054 2 477.305136 952.595718 88018.02 0.36215 0.00017286 -0.083562 -3.9884E-05 0.27859 0.00013297 477.304983371346 481.312172829562 120.98 1.1087 120.98 120.74 121.85 7.6294E-06 174 75 5 0 0 0 0.0064312 2 79940 64.207 10.622 1 0.75218 0.8077 0 22858000 12155000 10704000 22106 34;1513 8328 8517 34724;34725 34724 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3054 2 477.305136 952.595718 87670.84 0.46755 0.00022316 -0.10206 -4.8716E-05 0.36549 0.00017445 477.305011299836 481.312091561633 122.97 1.8014 122.97 122.43 124.24 0 453 133 4 0 0 0 0.0064086 3 81777 64.265 6.9836 1 0.81941 0.86016 0 24018000 12437000 11581000 22107 34;1513 8328 8517 34726;34727;34728 34726 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 87670.84 0.46968 0.00022418 -0.083351 -3.9784E-05 0.38633 0.00018439 477.305007880222 481.3120857971 126.33 2.244 126.33 125.44 127.69 -7.6294E-06 302 141 4 0 0 0 0.0022212 2 83901 75.213 15.979 1 0.83047 0.86675 0 10083000 5130200 4952800 22108 34;1513 8328 8517 34729;34730 34729 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3048 2 477.305136 952.595718 87575.74 0.33494 0.00015987 0.26855 0.00012818 0.6035 0.00028805 477.304995196526 481.312258014066 129.13 0.7973 129.13 128.89 129.68 0 164 54 5 0 0 0 0.0056953 2 86555 66.073 6.2494 1 0.86068 0.88848 0 9672700 4980000 4692700 22109 34;1513 8328 8517 34731;34732 34732 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3119 2 477.305136 952.595718 88367.29 0.34063 0.00016259 -0.097077 -4.6335E-05 0.24356 0.00011625 477.305002086859 481.312081237693 130.68 1.6039 130.68 129.68 131.29 0 334 111 5 0 0 0 0.0022292 3 87074 75.109 6.9836 1 0.87273 0.91365 0 10538000 4684900 5852800 22110 34;1513 8328 8517 34733;34734;34735 34733 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.305 2 477.305136 952.595718 88367.28 0.46162 0.00022033 -0.15688 -7.4881E-05 0.30473 0.00014545 477.304997438515 481.312068250881 131.88 2.5258 131.88 131 133.53 0 488 150 5 0 0 0 0.0060214 5 89064 65.246 15.537 1 0.79466 0.80648 0 12830000 7662400 5167600 22111 34;1513 8328 8517 34736;34737;34738;34739;34740 34740 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.312 2 477.305136 952.595718 87368.85 0.18886 9.0145E-05 -0.072691 -3.4696E-05 0.11617 5.5449E-05 477.305114903558 481.312566459862 136.86 0.98032 136.86 136.29 137.27 0 299 108 6 0 0 0 0.0066845 1 90947 63.565 6.2841 1 0.64322 0.66321 0 9629000 5738100 3891000 22112 34;1513 8328 8517 34741 34741 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 86691.96 -0.097717 -4.6641E-05 0.24551 0.00011718 0.14779 7.0543E-05 477.305196168421 481.312218201553 142.53 3.4026 142.53 141.5 144.9 0 1431 378 7 0 0 0 0.0013192 3 92190 86.953 18.532 1 0.83877 0.85977 0 31915000 17389000 14526000 22113 34;1513 8328 8517 34742;34743;34744 34742 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3132 2 477.305136 952.595718 NaN NaN NaN 1.4237 0.00067954 NaN NaN NaN NaN 80.681 0.28603 80.681 80.517 80.803 0 0 0 0 0.024277 1 49073 55.531 5.404 1 NaN NaN 0 7123100 0 7123100 22114 34;1513 8328 8517 34745 34745 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3052 2 477.305136 952.595718 NaN NaN NaN 0.31332 0.00014955 NaN NaN NaN NaN 82.602 0.75369 82.602 82.141 82.894 0 0 0 0 0.025957 1 50425 54.776 11.53 1 NaN NaN 0 10429000 10429000 0 22115 34;1513 8328 8517 34746 34746 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3069 2 477.305136 952.595718 NaN NaN NaN 0.62215 0.00029696 NaN NaN NaN NaN 86.347 3.6098 86.347 84.331 87.941 0 0 0 0 0.0017385 3 53358 84.498 17.816 1 NaN NaN 0 12117000000 12117000000 0 22116 34;1513 8328 8517 34747;34748;34749 34749 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3067 2 477.305136 952.595718 NaN NaN NaN 0.83818 0.00040007 NaN NaN NaN NaN 87.436 1.4046 87.436 87.256 88.661 0 0 0 0 0.0019543 2 53806 83.313 14.398 1 NaN NaN 0 6221500000 6221500000 0 22117 34;1513 8328 8517 34750;34751 34750 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3052 2 477.305136 952.595718 NaN NaN NaN 0.33035 0.00015768 NaN NaN NaN NaN 90.88 0.62366 90.88 90.852 91.476 0 0 0 0 0.0017385 1 56394 84.498 17.816 1 NaN NaN 0 189390000 189390000 0 22118 34;1513 8328 8517 34752 34752 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN 0.14162 6.7598E-05 NaN NaN NaN NaN 101.15 1.0673 101.15 100.54 101.61 0 0 0 0 0.0050184 1 63450 75.213 6.2978 1 NaN NaN 0 29843000 0 29843000 22119 34;1513 8328 8517 34753 34753 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3121 2 477.305136 952.595718 NaN NaN NaN 0.40978 0.00019559 NaN NaN NaN NaN 101.77 0.27448 101.77 101.59 101.86 0 0 0 0 0.014028 1 64056 63.565 6.2841 1 NaN NaN 0 16205000 0 16205000 22120 34;1513 8328 8517 34754 34754 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3121 2 477.305136 952.595718 NaN NaN NaN -0.061807 -2.9501E-05 NaN NaN NaN NaN 108.75 0.82388 108.75 108.27 109.09 0 0 0 0 0.025957 1 69519 54.776 6.0207 1 NaN NaN 0 12209000 0 12209000 22121 34;1513 8328 8517 34755 34755 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN 0.11665 5.568E-05 NaN NaN NaN NaN 109.24 0.74187 109.24 108.99 109.74 0 0 0 0 0.028466 1 70164 53.968 3.8413 1 NaN NaN 0 9696100 0 9696100 22122 34;1513 8328 8517 34756 34756 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.313 2 477.305136 952.595718 NaN NaN NaN -0.01493 -7.126E-06 NaN NaN NaN NaN 110.01 1.4764 110.01 109.5 110.97 0 0 0 0 0.0050184 2 71448 75.213 14.453 1 NaN NaN 0 9811100 0 9811100 22123 34;1513 8328 8517 34757;34758 34758 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3054 2 477.305136 952.595718 NaN NaN NaN -0.027685 -1.3214E-05 NaN NaN NaN NaN 113.16 1.9677 113.16 112.03 114 0 0 0 0 0.010828 2 72800 66.073 7.0919 1 NaN NaN 0 12287000 12287000 0 22124 34;1513 8328 8517 34759;34760 34759 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.305 2 477.305136 952.595718 NaN NaN NaN -0.041216 -1.9673E-05 NaN NaN NaN NaN 117.15 1.0817 117.15 117 118.08 0 0 0 0 0.014028 2 77370 63.565 6.2841 1 NaN NaN 0 15063000 15063000 0 22125 34;1513 8328 8517 34761;34762 34762 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3054 2 477.305136 952.595718 NaN NaN NaN 0.19162 9.1463E-05 NaN NaN NaN NaN 118.65 1.0612 118.65 117.8 118.86 0 0 0 0 0.028466 1 78033 53.968 3.8413 1 NaN NaN 0 12528000 12528000 0 22126 34;1513 8328 8517 34763 34763 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3049 2 477.305136 952.595718 NaN NaN NaN -0.12119 -5.7846E-05 NaN NaN NaN NaN 119.09 2.0699 119.09 118.78 120.85 0 0 0 0 0.0013201 2 79310 86.794 14.655 1 NaN NaN 0 7939900 7939900 0 22127 34;1513 8328 8517 34764;34765 34765 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 NaN NaN NaN -0.52413 -0.00025017 NaN NaN NaN NaN 121.53 1.4259 121.53 121.1 122.53 7.6294E-06 0 0 0 0.0050688 2 80263 75.109 16.128 1 NaN NaN 0 4835300 0 4835300 22128 34;1513 8328 8517 34766;34767 34766 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3047 2 477.305136 952.595718 NaN NaN NaN -0.13914 -6.6413E-05 NaN NaN NaN NaN 124.91 1.8123 124.91 124.24 126.05 -7.6294E-06 0 0 0 0.0040108 2 82999 77.282 14.565 1 NaN NaN 0 5073600 5073600 0 22129 34;1513 8328 8517 34768;34769 34768 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.305 2 477.305136 952.595718 NaN NaN NaN 0.69312 0.00033083 NaN NaN NaN NaN 128.68 0.21188 128.68 128.57 128.78 0 0 0 0 0.016072 1 85964 61.962 4.6814 1 NaN NaN 0 5260100 5260100 0 22130 34;1513 8328 8517 34770 34770 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3047 2 477.305136 952.595718 NaN NaN NaN 0.29694 0.00014173 NaN NaN NaN NaN 139.38 2.4103 139.38 138.55 140.96 0 0 0 0 0.0068254 1 91461 71.501 15.49 1 NaN NaN 0 5514000 5514000 0 22131 34;1513 8328 8517 34771 34771 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3121 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.087 1 82.087 81.587 82.587 7.6294E-06 0 0 0 0.027045 1 50218 53.968 3.8413 1 22132 34;1513 8328 8517 34772 34772 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.055 1 94.055 93.555 94.555 0 0 0 0 0.0032648 1 58429 73.26 15.979 1 22133 34;1513 8328 8517 34773 34773 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3052 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.97 1 108.97 108.47 109.47 0 0 0 0 0.036074 1 69854 51.059 6.4484 1 22134 34;1513 8328 8517 34774 34774 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3053 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.76 1 109.76 109.26 110.26 0 0 0 0 0.0034046 1 70534 70.919 4.2369 1 22135 34;1513 8328 8517 34775 34775 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.305 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.95 1 110.95 110.45 111.45 0 0 0 0 0.017486 1 71509 57.047 2.4981 1 22136 34;1513 8328 8517 34776 34776 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.64 1 111.64 111.14 112.14 0 0 0 0 0.0083557 1 72094 65.252 6.271 1 22137 34;1513 8328 8517 34777 34777 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3046 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.73 1 111.73 111.23 112.23 0 0 0 0 0.0032648 1 72169 73.26 4.3452 1 22138 34;1513 8328 8517 34778 34778 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3122 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.41 1 112.41 111.91 112.91 0 0 0 0 0.011752 1 72736 61.962 4.6814 1 22139 34;1513 8328 8517 34779 34779 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3122 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.18 1 113.18 112.68 113.68 0 0 0 0 0.0032648 1 73397 73.26 15.979 1 22140 34;1513 8328 8517 34780 34780 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3051 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.01 1 114.01 113.51 114.51 -7.6294E-06 0 0 0 0.011752 1 74085 61.962 4.6814 1 22141 34;1513 8328 8517 34781 34781 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.66 1 114.66 114.16 115.16 0 0 0 0 0.0031482 1 74645 75.213 14.453 1 22142 34;1513 8328 8517 34782 34782 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3123 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.45 1 115.45 114.95 115.95 0 0 0 0 0.003213 1 75323 74.127 5.7058 1 22143 34;1513 8328 8517 34783 34783 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.3049 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.54 1 115.54 115.04 116.04 0 0 0 0 0.0094345 1 75413 64.207 6.9263 1 22144 34;1513 8328 8517 34784 34784 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3122 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.24 1 116.24 115.74 116.74 0 0 0 0 0.0063761 1 76013 67.169 0.48746 1 22145 34;1513 8328 8517 34785 34785 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.03 1 117.03 116.53 117.53 -7.6294E-06 0 0 0 0.0093753 1 76680 64.265 14.138 1 22146 34;1513 8328 8517 34786 34786 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.81 1 117.81 117.31 118.31 7.6294E-06 0 0 0 0.0034281 1 77348 70.525 5.7674 1 22147 34;1513 8328 8517 34787 34787 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3126 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.93 1 118.93 118.43 119.43 0 0 0 0 0.0031544 1 78329 75.109 6.1943 1 22148 34;1513 8328 8517 34788 34788 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.73 1 119.73 119.23 120.23 0 0 0 0 0.0032648 1 78990 73.26 4.3452 1 22149 34;1513 8328 8517 34789 34789 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3125 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.49 1 120.49 119.99 120.99 0 0 0 0 0.026458 1 79617 54.157 6.3086 1 22150 34;1513 8328 8517 34790 34790 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.1 1 125.1 124.6 125.6 0 0 0 0 0.0063761 1 83298 67.169 9.8885 1 22151 34;1513 8328 8517 34791 34791 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3122 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.7 1 127.7 127.2 128.2 -7.6294E-06 0 0 0 0.0083557 1 85296 65.252 6.271 1 22152 34;1513 8328 8517 34792 34792 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.3124 2 477.305136 952.595718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.75 1 128.75 128.25 129.25 0 0 0 0 0.017486 1 86034 57.047 11.33 1 22153 34;1513 8328 8517 34793 34793 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.3123 2 477.305136 952.595718 87205.89 0.51762 0.00024706 -0.038502 -1.8377E-05 0.47912 0.00022868 477.305018912956 481.312111077842 112.06 6.2008 112.06 111.8 118 -7.6294E-06 936 293 6 0 0 0 0.0089883 3 65527 60.59 6.0404 1 0.84089 0.66539 0 10477000 5909700 4567500 22154 34;1513 8328 8517 34794;34795;34796 34796 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 477.3052 2 477.305136 952.595718 NaN NaN NaN 0.54376 0.00025954 NaN NaN NaN NaN 99.808 12.272 99.808 99.585 111.86 0 0 0 0 0.00016738 4 59335 94.114 21.976 1 NaN NaN 0 2208000000 2208000000 0 22155 34;1513 8328 8517 34797;34798;34799;34800 34800 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 477.3046 2 477.305136 952.595718 87796.81 0.50372 0.00024043 -0.23735 -0.00011329 0.26637 0.00012714 477.304879625188 481.312019312555 119.21 1.7622 119.21 118.16 119.92 0 252 80 4 0 0 0 0.041466 1 69860 41.448 5.053 1 0.80036 0.65603 0 5032100 2521300 2510800 22156 34;1513 8328 8517 34801 34801 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.3125 2 477.305136 952.595718 88220.23 0.70996 0.00033887 -0.32498 -0.00015511 0.38498 0.00018376 477.304891384302 481.311959966875 131.11 2.5069 131.11 130.11 132.61 0 265 107 4 0 0 0 0.042514 1 79484 41.029 7.2325 1 0.89724 0.71636 0 2413900 1111900 1301900 22157 34;1513 8328 8517 34802 34802 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 477.2003 2 477.305136 952.595718 NaN NaN NaN 0.38929 0.00018581 NaN NaN NaN NaN 99.606 20.916 99.606 97.484 118.4 0 0 0 0 0.0001488 5 55600 95.741 23.603 1 NaN NaN 0 2151800000 2151800000 0 22158 34;1513 8328 8517 34803;34804;34805;34806;34807 34805 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.3126 2 477.305136 952.595718 NaN NaN NaN -0.021638 -1.0328E-05 NaN NaN NaN NaN 117.63 1.5262 117.63 116.87 118.4 0 0 0 0 0.022176 1 68267 57.177 5.3903 1 NaN NaN 0 3621300 0 3621300 22159 34;1513 8328 8517 34808 34808 LLLPGELAKHAVSEGTK 17 2 0 Unmodified _LLLPGELAKHAVSEGTK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;L0R4T3;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;ABCF2;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.5066 4 441.506998 1761.99888 91843.69 -0.021106 -9.3185E-06 -0.42431 -0.00018734 -0.44542 -0.00019665 441.757212124785 445.514010206385 78.524 0.99443 78.524 77.962 78.956 0 285 85 6 0 0 0 0.041661 1 46348 14.793 14.793 1 0.84069 0.99538 0 29597000 18396000 11202000 22160 34;1513 8329 8518 34809 34809 LLLPGVIK 8 1 0 Unmodified _LLLPGVIK_ 0 0 0 P49916;B7Z6I3;K7ERZ5;K7EQB6 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.7998 2 426.799489 851.584425 93786.64 0.19868 8.4796E-05 0.0040069 1.7101E-06 0.20269 8.6506E-05 426.799425930582 430.806509594522 97.826 0.80477 97.826 97.447 98.251 0 217 66 4 0 0 0 0.034605 1 59601 49.358 25.386 1 0.55306 0.54286 0 22971000 15058000 7912400 22161 1589 8330 8519 34810 34810 LLLPGVIK 8 1 0 Unmodified _LLLPGVIK_ 0 0 0 P49916;B7Z6I3;K7ERZ5;K7EQB6 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.7992 2 426.799489 851.584425 94796.7 0.25735 0.00010984 -0.12941 -5.5231E-05 0.12794 5.4607E-05 426.79933215751 430.80642527729 96.771 0.80118 96.771 96.441 97.242 0 236 64 5 0 0 0 0.031924 1 60344 50.966 25.139 1 0.58147 0.60048 0 25018000 12720000 12298000 22162 1589 8330 8519 34811 34811 LLLPVAEYFSGVQLPPHLSPFVTEK 25 1 0 Unmodified _LLLPVAEYFSGVQLPPHLSPFVTEK_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;Q6ZUE0;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 930.8516 3 927.845706 2780.51529 61805.01 0.4413 0.00040946 0.91486 0.00084885 1.3562 0.0012583 928.516985314546 930.852124856665 133.41 0.45137 133.41 133.19 133.64 0 71 11 12 0 0 0 1.75E-16 3 87368 93.966 93.966 1 0.9083 1.0769 0 482180000 255910000 226270000 22163 886 8331 8520 34812;34813;34814 34813 LLLPVAEYFSGVQLPPHLSPFVTEK 25 1 0 Unmodified _LLLPVAEYFSGVQLPPHLSPFVTEK_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;Q6ZUE0;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.1804 3 927.845706 2780.51529 61556.32 0.17506 0.00016243 0.74964 0.00069555 0.9247 0.00085798 928.180446282573 930.851609161462 133.38 0.57851 133.38 133.05 133.63 0 87 15 13 0 0 0 1.394E-36 2 89582 134.56 134.56 1 0.86919 1.0246 0 648450000 349870000 298580000 22164 886 8331 8520 34815;34816 34816 LLLPVAEYFSGVQLPPHLSPFVTEK 25 1 0 Unmodified _LLLPVAEYFSGVQLPPHLSPFVTEK_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;Q6ZUE0;H7C267 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 930.8517 3 927.845706 2780.51529 63196.64 0.81976 0.00076061 0.88511 0.00082124 1.7049 0.0015819 928.181061054615 930.851626854287 134.84 0.28653 134.84 134.66 134.95 0 28 5 10 0 0 0 6.3685E-05 2 81681 36.256 36.256 1 1.0745 0.90848 0 58353000 27317000 31036000 22165 886 8331 8520 34817;34818 34817 LLLPWLEAR 9 0 1 Unmodified _LLLPWLEAR_ 0 0 0 A0A087WVQ6;Q00610 A0A087WVQ6 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.8417 2 555.837134 1109.65972 NaN NaN NaN 0.61274 0.00034058 NaN NaN NaN NaN 121.65 0.60918 121.65 121.27 121.88 7.6294E-06 0 0 0 0.0084211 1 78667 68.224 68.224 1 NaN NaN 0 2364600 0 2364600 22166 419 8332 8521 34819 34819 LLLPWLEAR 9 0 1 Unmodified _LLLPWLEAR_ 0 0 0 A0A087WVQ6;Q00610 A0A087WVQ6 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.8372 2 555.837134 1109.65972 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.64 1 121.64 121.14 122.14 0 0 0 0 0.033606 1 78637 51.854 26.118 1 22167 419 8332 8521 34820 34820 LLLPWLEAR 9 0 1 Unmodified _LLLPWLEAR_ 0 0 0 A0A087WVQ6;Q00610 A0A087WVQ6 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.8382 2 555.837134 1109.65972 85976.53 0.75353 0.00041884 0.070675 3.9284E-05 0.8242 0.00045812 555.837010774037 560.841126220182 121.01 0.54352 121.01 120.82 121.36 0 60 21 4 0 0 0 0.0074258 1 80064 61.999 61.999 1 2.1448 2.1881 0 5197800 1116600 4081200 22168 419 8332 8521 34821 34821 LLLQGEADQSLLTFIDK 17 1 0 Unmodified _LLLQGEADQSLLTFIDK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 957.0315 2 952.522399 1903.03024 62636.75 0.84595 0.00080579 -0.0082997 -7.9057E-06 0.83765 0.00079788 953.023802304962 956.529466180457 128.12 1.0568 128.12 127.54 128.59 0 344 70 10 0 0 0 1.1853E-12 3 83411 117.93 100.99 1 0.61924 0.69501 0 67332000 41775000 25557000 22169 1665 8333 8522 34822;34823;34824 34822 LLLQGEADQSLLTFIDK 17 1 0 Unmodified _LLLQGEADQSLLTFIDK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 953.0245 2 952.522399 1903.03024 62717.68 0.86991 0.00082861 0.18557 0.00017676 1.0555 0.0010054 953.024823129698 956.529755533756 127.75 1.2414 127.75 126.96 128.2 7.6294E-06 262 76 10 0 0 0 5.6396E-09 2 85256 102.73 98.942 1 0.67537 0.75974 0 120210000 67767000 52439000 22170 1665 8333 8522 34825;34826 34826 LLLQHAPLR 9 0 1 Unmodified _LLLQHAPLR_ 0 0 0 A0A024R169;Q9NXF1;B4DQR0 A0A024R169 A0A024R169 TEX10 Testis-expressed sequence 10 protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 354.2256 3 354.225709 1059.6553 NaN NaN NaN -0.43089 -0.00015263 NaN NaN NaN NaN 52.873 0.37677 52.873 52.67 53.046 0 0 0 0 0.054305 1 29422 28.727 20.795 1 NaN NaN 0 2933700 2933700 0 22171 72 8334 8523 34827 34827 LLLQHAPLR 9 0 1 Unmodified _LLLQHAPLR_ 0 0 0 A0A024R169;Q9NXF1;B4DQR0 A0A024R169 A0A024R169 TEX10 Testis-expressed sequence 10 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 354.5599 3 354.225709 1059.6553 105818.8 0.36405 0.00012895 -0.42139 -0.00014927 -0.057345 -2.0313E-05 354.559976778486 357.561574783783 50.512 0.2519 50.512 50.369 50.621 0 51 22 4 0 0 0 0.033486 1 28521 29.473 29.473 1 0.72624 0.72213 0 8839700 5739300 3100400 22172 72 8334 8523 34828 34828 LLLSATSGEK 10 1 0 Unmodified _LLLSATSGEK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7999 2 509.792589 1017.57063 85475.41 0.53555 0.00027302 -0.21126 -0.0001077 0.32429 0.00016532 509.792235572384 513.799605581805 48.215 1.0308 48.215 47.863 48.894 0 319 82 6 0 0 0 0.00035656 2 26218 88.948 53.068 1 0.9174 1.0331 0 73955000 39261000 34694000 22173 214 8335 8524 34829;34830 34830 LLLSATSGEK 10 1 0 Unmodified _LLLSATSGEK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.7927 2 509.792589 1017.57063 85173.05 0.3151 0.00016064 -0.20043 -0.00010218 0.11468 5.8461E-05 509.79225033085 513.799626172426 47.143 0.85937 47.143 46.824 47.683 0 287 66 7 0 0 0 0.00041053 2 26075 87.308 52.5 1 0.93599 1.0465 0 107400000 54421000 52974000 22174 214 8335 8524 34831;34832 34832 LLLSATSGEK 10 1 0 Unmodified _LLLSATSGEK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.7926 2 509.792589 1017.57063 85293.62 0.4957 0.0002527 -0.074043 -3.7747E-05 0.42166 0.00021496 509.792562113177 513.799517933937 54.818 0.83076 54.818 54.517 55.348 -3.8147E-06 243 56 7 0 0 0 0.0035438 2 27344 64.04 29.232 1 1.2328 0.98934 0 8088200 3628400 4459700 22175 214 8335 8524 34833;34834 34834 LLLSATSGEK 10 1 0 Unmodified _LLLSATSGEK_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.7924 2 509.792589 1017.57063 86413.84 0.30098 0.00015344 -0.22096 -0.00011264 0.080019 4.0793E-05 509.792474552753 513.799500234635 55.139 0.85912 55.139 54.756 55.616 -3.8147E-06 186 55 4 0 0 0 0.0029784 2 26940 66.621 31.814 1 1.2078 0.98784 0 8349400 4104500 4244900 22176 214 8335 8524 34835;34836 34836 LLLTTQFPFK 10 1 0 Unmodified _LLLTTQFPFK_ 0 0 0 B4E014;Q9UBD5;B7Z8A5;B7ZAI3;Q6IBJ0;B4DZ51 B4E014 B4E014 ORC3;ORC3L Origin recognition complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.3649 2 604.357899 1206.70125 80686.35 0.65816 0.00039776 -0.065324 -3.9479E-05 0.59283 0.00035828 604.357463739193 608.364815516212 125.9 0.46268 125.9 125.66 126.12 0 87 21 6 0 0 0 0.013042 1 74750 49.813 49.813 1 1.4377 1.152 0 2449800 958410 1491400 22177 1058 8336 8525 34837 34837 LLMLHGQK 8 1 0 Oxidation (M) _LLM(ox)LHGQK_ LLM(1)LHGQK LLM(80.29)LHGQK 0 1 0 Q15269;A0A0B4J2E5;A0A096LPI6 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.2807 2 478.273312 954.532072 87989.77 0.066588 3.1847E-05 0.64292 0.00030749 0.70951 0.00033934 478.273200336865 482.280832232392 25.853 0.24642 25.853 25.695 25.941 0 47 13 6 0 0 0 0.0039009 1 11398 80.294 46.778 1 1.4414 1.5556 0 34628000 14621000 20007000 22178 1756 8337 8526 34838 34838 1626 LLMLHGQK 8 1 0 Oxidation (M) _LLM(ox)LHGQK_ LLM(1)LHGQK LLM(60.29)LHGQK 0 1 0 Q15269;A0A0B4J2E5;A0A096LPI6 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.2733 2 478.273312 954.532072 88297.94 0.19699 9.4213E-05 0.15557 7.4403E-05 0.35255 0.00016862 478.272978966746 482.280772363117 25.171 0.55858 25.171 24.908 25.467 0 70 21 5 0 0 0 0.008561 1 10850 60.294 31.782 1 1.452 1.5817 0 39839000 15011000 24828000 22179 1756 8337 8526 34839 34839 1626 LLMMAGIDDCYTSAR 15 0 1 2 Oxidation (M) _LLM(ox)M(ox)AGIDDCYTSAR_ LLM(1)M(1)AGIDDCYTSAR LLM(122.51)M(122.51)AGIDDCYTSAR 0 2 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PQD7;I3L404;E9PM36;Q9BSW5;O60249 P15880 P15880 RPS2;rps2 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.8887 2 874.88624 1747.75793 63850.72 0.57496 0.00050302 -0.37909 -0.00033166 0.19587 0.00017137 874.886193354762 879.890423430354 67.564 0.97643 67.564 67.028 68.005 0 440 80 8 0 0 0 1.2847E-10 2 38845 122.51 120 1 2.1842 2.4354 0 84170000 25242000 58928000 22180 1485 8338 8527 34840;34841 34840 1245;1246 LLMMAGIDDCYTSAR 15 0 1 2 Oxidation (M) _LLM(ox)M(ox)AGIDDCYTSAR_ LLM(1)M(1)AGIDDCYTSAR LLM(113.22)M(113.22)AGIDDCYTSAR 0 2 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PQD7;I3L404;E9PM36;Q9BSW5;O60249 P15880 P15880 RPS2;rps2 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.3912 2 874.88624 1747.75793 63453.9 0.58041 0.00050779 -0.51507 -0.00045063 0.065336 5.7162E-05 875.387825516757 879.890270860173 66.609 0.87935 66.609 66.134 67.013 0 411 72 8 0 0 0 5.5396E-10 2 39122 113.22 106.56 1 2.1462 2.464 0 79349000 23371000 55978000 22181 1485 8338 8527 34842;34843 34843 1245;1246 LLMMAGIDDCYTSAR 15 0 1 Oxidation (M) _LLM(ox)MAGIDDCYTSAR_ LLM(0.965)M(0.035)AGIDDCYTSAR LLM(14.43)M(-14.43)AGIDDCYTSAR 0 1 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PQD7;I3L404;E9PM36;Q9BSW5;O60249 P15880 P15880 RPS2;rps2 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 872.396 2 866.888783 1731.76301 65451.24 0.34902 0.00030256 -0.083169 -7.2099E-05 0.26585 0.00023046 867.391146038406 872.394205626544 101.68 0.40239 101.68 101.46 101.86 0 107 25 6 0 0 0 0.0017805 1 57660 41.401 40.289 2 0.67839 0.56918 0 4175400 2372400 1803000 22182 1485 8338 8528 34844 34844 1245;1246 LLMSDIVFMR 10 0 1 2 Oxidation (M) _LLM(ox)SDIVFM(ox)R_ LLM(1)SDIVFM(1)R LLM(95.1)SDIVFM(95.1)R 0 2 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8265 2 628.822509 1255.63047 NaN NaN NaN -1.2004 -0.00075483 NaN NaN NaN NaN 86.884 0.61721 86.884 86.42 87.037 0 0 0 0 2.2151E-05 1 52289 95.099 74.197 1 NaN NaN 0 11942000 0 11942000 22183 1742 8339 8529 34845 34845 1589;1590 LLMSDIVFMR 10 0 1 2 Oxidation (M) _LLM(ox)SDIVFM(ox)R_ LLM(1)SDIVFM(1)R LLM(104.44)SDIVFM(104.44)R 0 2 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8272 2 628.822509 1255.63047 NaN NaN NaN -0.43028 -0.00027057 NaN NaN NaN NaN 85.831 0.60891 85.831 85.447 86.056 0 0 0 0 2.6333E-06 2 52774 104.44 88.234 1 NaN NaN 0 18744000 0 18744000 22184 1742 8339 8529 34846;34847 34846 1589;1590 LLMSEDYFTQAMEVK 15 1 0 2 Oxidation (M) _LLM(ox)SEDYFTQAM(ox)EVK_ LLM(1)SEDYFTQAM(1)EVK LLM(43.68)SEDYFTQAM(43.68)EVK 0 2 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.9305 2 918.923345 1835.83214 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.175 1 87.175 86.675 87.675 0 0 0 0 0.01623 1 52627 43.68 34.726 1 22185 1207 8340 8530 34848 34848 922;923 LLNAFIVAEK 10 1 0 Unmodified _LLNAFIVAEK_ 0 0 0 A0A024R932;Q8N0S6 A0A024R932 A0A024R932 C1orf155;CENPL Centromere protein L ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.3356 2 559.334424 1116.6543 NaN NaN NaN 1.9986 0.0011179 NaN NaN NaN NaN 96.221 0.48546 96.221 96.016 96.501 0 0 0 0 0.010494 1 58658 62.823 34.311 1 NaN NaN 0 6038300 6038300 0 22186 269 8341 8531 34849 34849 LLNETLGEVGSPGLLFYSLR 20 0 1 Unmodified _LLNETLGEVGSPGLLFYSLR_ 0 0 0 H0YN14;D3DS63;B3KTB3;B3KT38;B3KPS9;Q59FI4;Q8TEX9 H0YN14 H0YN14 IPO4 Importin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1095.1011 2 1089.59389 2177.17322 56576.14 0.47924 0.00052218 1.0163 0.0011074 1.4956 0.0016296 1090.09440908442 1094.60202890919 132.71 0.54858 132.71 132.5 133.05 0 107 30 6 0 0 0 0.0055046 1 89024 27.969 27.969 1 1.1757 1.1727 0 8963700 3953900 5009800 22187 923 8342 8532 34850 34850 LLNFLMK 7 1 0 Oxidation (M) _LLNFLM(ox)K_ LLNFLM(1)K LLNFLM(71.36)K 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.7594 2 447.759507 893.50446 NaN NaN NaN -0.050373 -2.2555E-05 NaN NaN NaN NaN 87.059 0.16988 87.059 86.96 87.13 0 0 0 0 0.0098124 1 52573 71.359 26.414 1 NaN NaN 0 25405000 25405000 0 22188 1665 8343 8533 34851 34851 1452 LLNFLMK 7 1 0 Oxidation (M) _LLNFLM(ox)K_ LLNFLM(1)K LLNFLM(54.53)K 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.7597 2 447.759507 893.50446 91157.73 0.35895 0.00016072 1.1177 0.00050045 1.4766 0.00066117 447.759701691252 451.767335020139 85.927 0.35509 85.927 85.633 85.988 0 68 24 5 0 0 0 0.0248 1 52950 54.525 28.416 1 1.2477 1.406 0 68391000 29465000 38926000 22189 1665 8343 8533 34852 34852 1452 LLNGESFNTK 10 1 0 Unmodified _LLNGESFNTK_ 0 0 0 REV__F8VWK7 REV__F8VWK7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8004 2 561.793121 1121.57169 NaN NaN NaN -1.1011 -0.00061858 NaN NaN NaN NaN 43.705 0.34664 43.705 43.481 43.828 3.8147E-06 0 0 0 0.0032547 1 23704 77.282 1.5443 1 NaN NaN 0 15129000 0 15129000 + 22190 2176 8344 8534 34853 34853 LLNILDPK 8 1 0 Unmodified _LLNILDPK_ 0 0 0 A0A024R5Q8;Q05D32 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.2913 2 463.289485 924.564418 91104.09 0.77705 0.00036 0.11477 5.3173E-05 0.89182 0.00041317 463.289465556318 467.296543910107 91.078 0.74347 91.078 90.8 91.543 0 199 58 5 0 0 0 0.009998 2 54984 73.248 34.83 1 0.89928 0.89936 0 26602000 12057000 14545000 22191 187 8345 8535 34854;34855 34854 LLNILDPK 8 1 0 Unmodified _LLNILDPK_ 0 0 0 A0A024R5Q8;Q05D32 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2898 2 463.289485 924.564418 91456.12 0.42158 0.00019531 0.094357 4.3715E-05 0.51593 0.00023903 463.289488854573 467.296526504017 90.018 0.80756 90.018 89.711 90.519 0 238 72 5 0 0 0 0.034429 1 55475 49.423 15.42 1 0.95009 0.9678 0 17002000 7976900 9025500 22192 187 8345 8535 34856 34856 LLNILDPK 8 1 0 Unmodified _LLNILDPK_ 0 0 0 A0A024R5Q8;Q05D32 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.2963 2 463.289485 924.564418 90077 0.0051769 2.3984E-06 0.46032 0.00021326 0.4655 0.00021566 463.289874910666 467.296582878322 103.58 1.0237 103.58 103.11 104.14 -7.6294E-06 172 69 5 0 0 0 0.0395 1 57864 47.574 28.792 1 1.6228 1.3153 0 2690600 961330 1729300 22193 187 8345 8535 34857 34857 LLNILMQLR 9 0 1 Oxidation (M) _LLNILM(ox)QLR_ LLNILM(1)QLR LLNILM(129.4)QLR 0 1 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.3418 2 565.341726 1128.6689 81196.58 0.889 0.00050259 -0.22698 -0.00012832 0.66202 0.00037427 565.341618530943 570.345739464859 111.29 0.57888 111.29 111.08 111.66 0 180 41 7 0 0 0 3.8668E-06 2 70003 129.4 105.24 1 3.2386 3.4561 0 44265000 12324000 31942000 22194 1391 8346 8536 34858;34859 34859 1065 LLNILMQLR 9 0 1 Oxidation (M) _LLNILM(ox)QLR_ LLNILM(1)QLR LLNILM(114.78)QLR 0 1 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.342 2 565.341726 1128.6689 79829.3 0.73853 0.00041752 -0.32979 -0.00018644 0.40874 0.00023108 565.341619096923 570.345707435022 110.57 0.56211 110.57 110.37 110.93 0 197 42 7 0 0 0 1.1631E-05 2 71155 114.78 90.628 1 3.6687 4.0783 0 43259000 9548500 33711000 22195 1391 8346 8536 34860;34861 34861 1065 LLNILMQLR 9 0 1 Oxidation (M) _LLNILM(ox)QLR_ LLNILM(1)QLR LLNILM(80.23)QLR 0 1 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.3469 2 565.341726 1128.6689 84428.67 0.80977 0.0004578 0.018503 1.0461E-05 0.82828 0.00046826 565.341801393334 570.345979111309 122.26 0.46454 122.26 122.05 122.52 7.6294E-06 71 22 5 0 0 0 0.00088942 1 72900 80.229 56.074 1 4.0792 3.4289 0 4385800 922050 3463700 22196 1391 8346 8536 34862 34862 1065 LLNILMQLR 9 0 1 Oxidation (M) _LLNILM(ox)QLR_ LLNILM(1)QLR LLNILM(46.43)QLR 0 1 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.3461 2 565.341726 1128.6689 NaN NaN NaN 0.44908 0.00025388 NaN NaN NaN NaN 130.97 0.60948 130.97 130.8 131.41 0 0 0 0 0.016153 1 79499 46.426 33.389 1 NaN NaN 0 1327200 0 1327200 22197 1391 8346 8536 34863 34863 1065 LLNILMQLR 9 0 1 Oxidation (M) _LLNILM(ox)QLR_ LLNILM(1)QLR LLNILM(107.59)QLR 0 1 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.8465 2 565.341726 1128.6689 80188.7 0.82116 0.00046424 -0.334 -0.00018882 0.48716 0.00027541 565.341459377181 570.345904215818 122.07 0.39407 122.07 121.81 122.2 0 44 18 4 0 0 0 8.2018E-05 1 71781 107.59 83.439 1 2.5425 2.1182 0 6922300 2116900 4805400 22198 1391 8346 8536 34864 34864 1065 LLNILMQLR 9 0 1 Oxidation (M) _LLNILM(ox)QLR_ LLNILM(1)QLR LLNILM(46.43)QLR 0 1 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.3458 2 565.341726 1128.6689 NaN NaN NaN 0.37513 0.00021208 NaN NaN NaN NaN 130.75 0.45966 130.75 130.52 130.98 0 0 0 0 0.016153 1 78429 46.426 33.389 1 NaN NaN 0 1635100 0 1635100 22199 1391 8346 8536 34865 34865 1065 LLNILMQLR 9 0 1 Unmodified _LLNILMQLR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.3483 2 557.344269 1112.67399 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.73 1 118.73 118.23 119.23 -7.6294E-06 0 0 0 0.0027559 1 76235 81.784 48.943 1 22200 1391 8346 8537 34866 34866 LLNILMQLR 9 0 1 Unmodified _LLNILMQLR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.3477 2 557.344269 1112.67399 NaN NaN NaN -1.2518 -0.0006977 NaN NaN NaN NaN 118.08 0.43272 118.08 117.85 118.28 0 0 0 0 0.0017848 1 77642 84.244 48.364 1 NaN NaN 0 1608700 0 1608700 22201 1391 8346 8537 34867 34867 LLNILMQLR 9 0 1 Unmodified _LLNILMQLR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.3444 2 557.344269 1112.67399 81730.62 0.59742 0.00033297 0.12606 7.026E-05 0.72348 0.00040323 557.344468745303 562.348416005982 131 0.70789 131 130.77 131.48 0 89 30 6 0 0 0 0.004769 2 79510 68.422 52.219 1 5.4462 4.5497 0 3317300 466730 2850600 22202 1391 8346 8537 34868;34869 34869 LLNILMQLR 9 0 1 Unmodified _LLNILMQLR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.349 2 557.344269 1112.67399 NaN NaN NaN -0.34028 -0.00018966 NaN NaN NaN NaN 130.76 0.61789 130.76 130.52 131.14 0 0 0 0 0.054061 1 78283 45.718 36.855 1 NaN NaN 0 5409400 0 5409400 22203 1391 8346 8537 34870 34870 LLNLGR 6 0 1 Unmodified _LLNLGR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 343.2214 2 343.221406 684.428259 104074.4 0.18958 6.5067E-05 0.044014 1.5106E-05 0.23359 8.0174E-05 343.221329608535 348.225493242304 48.562 0.64742 48.562 48.342 48.99 0 146 48 4 0 0 0 0.035252 1 27241 116.12 0 1 0.82383 0.89079 0 26940000 11767000 15173000 22204 1676 8347 8538 34871 34871 LLNNAFEELVAFQR 14 0 1 Unmodified _LLNNAFEELVAFQR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.9506 2 832.443754 1662.87296 67777.61 1.0499 0.00087398 -0.023824 -1.9832E-05 1.0261 0.00085415 832.443912143372 837.447537478348 123.22 0.61032 123.22 122.96 123.57 -7.6294E-06 271 47 8 0 0 0 1.441E-09 3 79823 120.06 120.06 1 1.1538 1.1881 0 24766000 11987000 12779000 22205 568 8348 8539 34872;34873;34874 34872 LLNNAFEELVAFQR 14 0 1 Unmodified _LLNNAFEELVAFQR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.4447 2 832.443754 1662.87296 68089.05 1.0828 0.00090135 -0.11053 -9.201E-05 0.97225 0.00080934 832.443939897884 837.447741566825 122.71 0.73908 122.71 122.46 123.2 0 310 57 8 0 0 0 2.0296E-09 3 81382 138.71 138.71 1 1.1727 1.2762 0 28914000 15018000 13896000 22206 568 8348 8539 34875;34876;34877 34876 LLNNAFEELVAFQR 14 0 1 Unmodified _LLNNAFEELVAFQR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.9207 2 832.443754 1662.87296 68118.73 0.72521 0.00060369 -1.3474 -0.0011216 -0.6222 -0.00051794 832.44212162706 837.950065359481 134.57 0.39853 134.57 134.5 134.9 0 17 9 5 0 0 0 0.011763 1 82190 56.551 47.596 1 0.51706 0.42791 0 11267000 6252400 5014500 22207 568 8348 8539 34878 34878 LLNPLVSK 8 1 0 Unmodified _LLNPLVSK_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.285 2 442.284203 882.553853 NaN NaN NaN 0.46845 0.00020719 NaN NaN NaN NaN 71.14 1.0237 71.14 70.752 71.776 0 0 0 0 0.036356 1 41314 55.37 31.846 1 NaN NaN 0 50460000 50460000 0 22208 2000 8349 8540 34879 34879 LLNPLVSK 8 1 0 Unmodified _LLNPLVSK_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.2843 2 442.284203 882.553853 90107.53 0.09307 4.1164E-05 0.19864 8.7855E-05 0.29171 0.00012902 442.284293680491 446.291245664481 69.914 1.1599 69.914 69.351 70.51 0 410 96 6 0 0 0 0.023225 2 41486 56.659 33.622 1 1.0269 1.1499 0 82734000 43755000 38980000 22209 2000 8349 8540 34880;34881 34880 LLNPLVSK 8 1 0 Unmodified _LLNPLVSK_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 446.2916 2 442.284203 882.553853 91767.55 -0.10491 -4.6402E-05 0.21545 9.5292E-05 0.11054 4.889E-05 442.284262077898 446.291271641952 80.759 1.0336 80.759 80.313 81.347 0 332 70 7 0 0 0 0.036793 1 43493 48.561 10.916 1 1.6514 1.2906 0 16220000 6507900 9711600 22210 2000 8349 8540 34882 34882 LLNPLVSK 8 1 0 Unmodified _LLNPLVSK_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 446.2913 2 442.284203 882.553853 91752.88 0.15586 6.8936E-05 0.070673 3.1257E-05 0.22654 0.00010019 442.284145559412 446.291235749928 80.82 1.0907 80.82 80.384 81.475 0 298 72 6 0 0 0 0.056359 1 42682 41.429 16.798 1 1.5377 1.2639 0 9774400 3871900 5902500 22211 2000 8349 8540 34883 34883 LLNPSATR 8 0 1 Unmodified _LLNPSATR_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4E013;M0QZ34;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.2574 2 436.253434 870.492316 91109.09 0.16028 6.9923E-05 0.32978 0.00014387 0.49006 0.00021379 436.253665884271 441.257569821789 28.829 0.41764 28.829 28.669 29.086 0 85 21 7 0 0 0 0.0091076 2 13796 75.738 13.021 1 1.1196 1.2131 0 49565000 21299000 28266000 22212 1068 8350 8541 34884;34885 34885 LLNPSATR 8 0 1 Unmodified _LLNPSATR_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4E013;M0QZ34;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2576 2 436.253434 870.492316 92102.61 0.18076 7.8857E-05 0.37501 0.0001636 0.55577 0.00024246 436.253666317982 441.257499676264 28.157 0.31958 28.157 28.025 28.345 0 43 14 6 0 0 0 0.0065363 2 13395 86.833 19.84 1 1.1723 1.3466 0 78248000 34746000 43502000 22213 1068 8350 8541 34886;34887 34886 LLNPSATR 8 0 1 Unmodified _LLNPSATR_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4E013;M0QZ34;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 441.2578 2 436.253434 870.492316 92868.87 -0.013923 -6.0741E-06 0.36609 0.00015971 0.35217 0.00015364 436.253469185961 441.257668083518 32.215 0.41531 32.215 32.024 32.44 0 87 21 6 0 0 0 0.031359 1 13309 51.335 5.3835 1 1.1811 1.0443 0 3903200 2017600 1885500 22214 1068 8350 8541 34888 34888 LLNQENIESELNSLR 15 0 1 Unmodified _LLNQENIESELNSLR_ 0 0 0 A0A087X0P0;Q02224;D6RBW0 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 886.464 2 886.462872 1770.91119 65076.33 0.48238 0.00042761 0.21724 0.00019257 0.69962 0.00062018 886.964846064187 891.467034069888 120.2 0.29622 120.2 120.08 120.37 0 61 14 7 0 0 0 0.0084689 2 70458 35.677 35.677 1 1.6671 1.3894 0 6816400 2318800 4497600 22215 445 8351 8542 34889;34890 34890 LLNTFLER 8 0 1 Unmodified _LLNTFLER_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.2936 2 503.290017 1004.56548 87663.12 0.27395 0.00013788 -0.22916 -0.00011533 0.044789 2.2542E-05 503.290013099378 508.293899063556 83.411 0.55682 83.411 83.157 83.713 0 118 47 4 0 0 0 0.0084049 1 49905 78.77 17.809 1 1.9066 2.0046 0 11442000 4703200 6738900 22216 1729 8352 8543 34891 34891 LLNTVEETTK 10 1 0 Unmodified _LLNTVEETTK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.3211 2 574.313886 1146.61322 81358.91 0.91957 0.00052812 -0.23573 -0.00013538 0.68384 0.00039274 574.313785968071 578.320643658161 39.611 0.31718 39.611 39.477 39.794 3.8147E-06 93 24 6 0 0 0 1.2241E-05 1 21060 103.55 103.55 1 2.5392 2.5788 0 29947000 8380500 21567000 22217 1602 8353 8544 34892 34892 LLNTWTNR 8 0 1 Unmodified _LLNTWTNR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.2769 2 509.277441 1016.54033 85320.2 0.31595 0.00016091 0.60227 0.00030672 0.91823 0.00046763 509.277318438759 514.281644001352 52.411 0.43734 52.411 52.232 52.67 0 131 31 6 0 0 0 0.029728 1 29109 52.403 39.444 1 0.4958 0.51535 0 20920000 13091000 7828300 22218 1665 8354 8545 34893 34893 LLNTWTNR 8 0 1 Unmodified _LLNTWTNR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2785 2 509.277441 1016.54033 83489.91 0.2834 0.00014433 0.35541 0.000181 0.6388 0.00032533 509.277326071438 514.783498865433 51.069 0.47203 51.069 50.943 51.415 0 118 37 4 0 0 0 0.011754 2 28893 69.198 48.677 1 0.56681 0.56983 0 11080000 6694600 4385900 22219 1665 8354 8545 34894;34895 34894 LLNTWTNR 8 0 1 Unmodified _LLNTWTNR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.2771 2 509.277441 1016.54033 NaN NaN NaN -0.099538 -5.0692E-05 NaN NaN NaN NaN 60.351 0.53378 60.351 60.122 60.655 0 0 0 0 0.027685 1 30319 60.682 48.913 1 NaN NaN 0 1307100 1307100 0 22220 1665 8354 8545 34896 34896 LLNVEVPQK 9 1 0 Unmodified _LLNVEVPQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.311 2 520.310949 1038.60735 84849.72 0.40816 0.00021237 -0.090761 -4.7224E-05 0.3174 0.00016514 520.310917368135 524.317887169447 66.059 0.94736 66.059 65.82 66.768 0 379 81 10 0 0 0 0.00087318 3 38010 93.162 56.461 1 1.046 1.2448 0 614600000 302020000 312580000 22221 2059 8355 8546 34897;34898;34899 34898 LLNVEVPQK 9 1 0 Unmodified _LLNVEVPQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.3117 2 520.310949 1038.60735 85476.3 0.31199 0.00016233 -0.058704 -3.0544E-05 0.25329 0.00013179 520.310931019264 524.31794403068 64.845 0.89284 64.845 64.648 65.54 0 358 73 10 0 0 0 0.00017767 2 38147 107.29 57.936 1 1.045 1.2325 0 767270000 382590000 384680000 22222 2059 8355 8546 34900;34901 34901 LLNVEVPQK 9 1 0 Unmodified _LLNVEVPQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.3181 2 520.310949 1038.60735 84159.38 0.26099 0.0001358 -0.14654 -7.6247E-05 0.11445 5.9549E-05 520.310858968983 524.317926447011 75.762 1.646 75.762 75.415 77.061 0 444 112 9 0 0 0 0.0016071 2 40190 83.206 53.83 1 1.9556 1.6731 0 70820000 23789000 47030000 22223 2059 8355 8546 34902;34903 34902 LLNVEVPQK 9 1 0 Unmodified _LLNVEVPQK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.311 2 520.310949 1038.60735 83083.62 0.1712 8.9075E-05 0.050476 2.6263E-05 0.22167 0.00011534 520.311022414409 524.317968419744 76.094 0.98009 76.094 75.738 76.718 0 369 67 9 0 0 0 0.0015025 2 39603 84.568 45.776 1 1.9199 1.6297 0 70126000 24380000 45746000 22224 2059 8355 8546 34904;34905 34905 LLNVWQVR 8 0 1 Unmodified _LLNVWQVR_ 0 0 0 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.3069 2 514.306001 1026.59745 84435.7 0.98396 0.00050606 0.86115 0.00044289 1.8451 0.00094895 514.306781953599 519.310068629571 91.049 1.2673 91.049 90.276 91.543 0 342 104 6 0 0 0 0.0053618 1 54914 90.706 79.637 1 1.1396 1.2662 0 72845000 35831000 37014000 22225 1752 8356 8547 34906 34906 LLNVWQVR 8 0 1 Unmodified _LLNVWQVR_ 0 0 0 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.3102 2 514.306001 1026.59745 84069.06 0.53055 0.00027286 0.86404 0.00044438 1.3946 0.00071724 514.306870593752 519.310034699166 89.841 1.306 89.841 89.11 90.416 0 305 111 5 0 0 0 0.0023307 3 55737 100.74 95.62 1 1.1759 1.3687 0 60535000 29650000 30885000 22226 1752 8356 8547 34907;34908;34909 34909 LLNVWQVR 8 0 1 Unmodified _LLNVWQVR_ 0 0 0 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.3105 2 514.306001 1026.59745 NaN NaN NaN 0.36235 0.00018636 NaN NaN NaN NaN 103.63 1.1924 103.63 102.86 104.05 7.6294E-06 0 0 0 0.0032173 1 57920 100.74 63.721 1 NaN NaN 0 6784000 0 6784000 22227 1752 8356 8547 34910 34910 LLPAELPAK 9 1 0 Unmodified _LLPAELPAK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.3046 2 476.29731 950.580068 87284.88 0.021589 1.0283E-05 0.34923 0.00016634 0.37082 0.00017662 476.297354435959 480.304438336786 69.585 0.83915 69.585 69.157 69.997 0 309 72 7 0 0 0 0.0056953 1 40362 66.073 50.634 1 0.67861 0.7629 0 70514000 41376000 29138000 22228 1665 8357 8548 34911 34911 LLPAELPAK 9 1 0 Unmodified _LLPAELPAK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.3042 2 476.29731 950.580068 87296.9 0.27338 0.00013021 0.096451 4.5939E-05 0.36983 0.00017615 476.29732012434 480.304305883468 68.356 0.71293 68.356 67.956 68.669 0 251 57 7 0 0 0 0.017716 2 40516 52.716 39.728 1 0.67188 0.75455 0 75001000 45430000 29572000 22229 1665 8357 8548 34912;34913 34913 LLPAELPAK 9 1 0 Unmodified _LLPAELPAK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 476.2974 2 476.29731 950.580068 88321.89 0.19847 9.4531E-05 0.12384 5.8985E-05 0.32231 0.00015352 476.297272179283 480.304368445395 79.108 0.90874 79.108 78.661 79.57 0 204 52 7 0 0 0 0.044918 1 42515 40.067 28.998 1 0.35694 0.28486 0 9351900 6970700 2381100 22230 1665 8357 8548 34914 34914 LLPAELPAK 9 1 0 Unmodified _LLPAELPAK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.3046 2 476.29731 950.580068 88449.91 0.24626 0.00011729 0.27825 0.00013253 0.52451 0.00024982 476.297382497113 480.304403208015 79.259 0.81384 79.259 78.881 79.694 0 173 48 5 0 0 0 0.053964 1 41788 36.76 29.61 1 0.37049 0.30166 0 7322600 5081300 2241300 22231 1665 8357 8548 34915 34915 LLPDITLLEPVEGEAAEELSR 21 0 1 Unmodified _LLPDITLLEPVEGEAAEELSR_ 0 0 0 Q96HT3;O15160 Q96HT3 Q96HT3 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1153.1161 2 1147.60993 2293.20531 NaN NaN NaN 0.70282 0.00080656 NaN NaN NaN NaN 133.27 0.25691 133.27 133.1 133.35 0 0 0 0 4.534E-30 1 87213 124.16 108.73 1 NaN NaN 0 21306000 0 21306000 22232 1376 8358 8549 34916 34916 LLPDITLLEPVEGEAAEELSR 21 0 1 Unmodified _LLPDITLLEPVEGEAAEELSR_ 0 0 0 Q96HT3;O15160 Q96HT3 Q96HT3 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1148.1133 2 1147.60993 2293.20531 NaN NaN NaN 0.43442 0.00049854 NaN NaN NaN NaN 133.25 0.22641 133.25 133.13 133.35 0 0 0 0 5.1245E-25 1 87215 118.13 104.72 1 NaN NaN 0 15125000 15125000 0 22233 1376 8358 8549 34917 34917 LLPDITLLEPVEGEAAEELSR 21 0 1 Unmodified _LLPDITLLEPVEGEAAEELSR_ 0 0 0 Q96HT3;O15160 Q96HT3 Q96HT3 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1153.1188 2 1147.60993 2293.20531 56839.07 0.27297 0.00031326 0.59513 0.00068298 0.8681 0.00099624 1148.11177608317 1153.11634870712 133.08 0.2919 133.08 132.9 133.19 1.5259E-05 71 12 8 0 0 0 2.2646E-15 3 89191 103.76 103.76 1 1.2044 1.3156 0 30171000 13613000 16558000 22234 1376 8358 8549 34918;34919;34920 34920 LLPDTILEK 9 1 0 Unmodified _LLPDTILEK_ 0 0 0 A0A024QZW2;Q9UMY1;H7C2B1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.3132 2 521.313158 1040.61176 84983.05 0.31828 0.00016592 0.081032 4.2243E-05 0.39931 0.00020817 521.313122064964 525.320154285154 98.24 0.59188 98.24 97.971 98.563 -7.6294E-06 194 35 8 0 0 0 0.028974 1 55324 46.447 14.305 1 0.89694 0.70003 0 15992000 8157300 7834900 22235 30 8359 8550 34921 34921 LLPDTILEK 9 1 0 Unmodified _LLPDTILEK_ 0 0 0 A0A024QZW2;Q9UMY1;H7C2B1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.3209 2 521.313158 1040.61176 85234.26 0.35131 0.00018314 -0.26666 -0.00013901 0.084649 4.4129E-05 521.312973150054 525.319942508379 98.031 0.58891 98.031 97.767 98.356 0 177 35 7 0 0 0 0.021253 2 54316 49.536 33.894 1 0.98024 0.80013 0 12756000 6216400 6539400 22236 30 8359 8550 34922;34923 34922 LLPDTINSINLDR 13 0 1 Unmodified _LLPDTINSINLDR_ 0 0 0 Q14008;Q8IYN5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.4098 2 742.40938 1482.80421 72686.95 0.74643 0.00055416 0.29346 0.00021786 1.0399 0.00077202 742.409456484392 747.414095417181 100.51 0.49101 100.51 100.25 100.74 0 161 39 6 0 0 0 0.0015611 1 61670 69.451 69.451 1 1.0139 1.0227 0 15597000 7719600 7877000 22237 1725 8360 8551 34924 34924 LLPDTINSINLDR 13 0 1 Unmodified _LLPDTINSINLDR_ 0 0 0 Q14008;Q8IYN5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.41 2 742.40938 1482.80421 72042.7 0.73425 0.00054512 -0.019331 -1.4351E-05 0.71492 0.00053077 742.409227430487 747.413581404388 99.844 0.51172 99.844 99.597 100.11 0 156 39 6 0 0 0 0.00092989 1 62683 72.006 72.006 1 1.1065 1.0902 0 13132000 7538400 5593100 22238 1725 8360 8551 34925 34925 LLPDTINSINLDR 13 0 1 Unmodified _LLPDTINSINLDR_ 0 0 0 Q14008;Q8IYN5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.9113 2 742.40938 1482.80421 72559.25 0.72352 0.00053715 -0.021701 -1.6111E-05 0.70182 0.00052104 742.409262185989 747.413773196159 112.7 0.46688 112.7 112.52 112.98 0 73 21 6 0 0 0 0.014444 2 64603 43.628 43.628 1 1.5275 1.3498 0 2435900 1022800 1413100 22239 1725 8360 8551 34926;34927 34926 LLPEEDLDVK 10 1 0 Unmodified _LLPEEDLDVK_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.8171 2 585.816261 1169.61797 80240.17 0.63904 0.00037436 -0.070532 -4.1319E-05 0.56851 0.00033304 586.31699647361 589.823902097109 76.521 0.91488 76.521 76.178 77.093 0 233 74 6 0 0 0 0.027928 1 45021 43.635 43.635 1 0.55257 0.54129 0 21800000 14179000 7620900 22240 1396 8361 8552 34928 34928 LLPEEDLDVK 10 1 0 Unmodified _LLPEEDLDVK_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.8162 2 585.816261 1169.61797 80431.48 0.54942 0.00032186 -0.11811 -6.9188E-05 0.43132 0.00025267 585.816060793526 589.823676607092 75.594 0.81362 75.594 75.284 76.098 7.6294E-06 199 74 5 0 0 0 0.0293 1 45606 43.083 43.083 1 0.64067 0.69135 0 21813000 12767000 9045200 22241 1396 8361 8552 34929 34929 LLPELLQPYTER 12 0 1 Unmodified _LLPELLQPYTER_ 0 0 0 Q13057 Q13057 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.4128 2 736.411391 1470.80823 NaN NaN NaN 0.66423 0.00048915 NaN NaN NaN NaN 110.03 0.4393 110.03 109.89 110.33 0 0 0 0 0.0017796 1 69075 74.162 48.043 1 NaN NaN 0 10673000 10673000 0 22242 1704 8362 8553 34930 34930 LLPGHPR 7 0 1 Unmodified _LLPGHPR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 395.7488 2 395.24013 788.465707 97866.4 0.053774 2.1254E-05 -0.16944 -6.6971E-05 -0.11567 -4.5718E-05 395.240060911385 400.243992270778 20.064 0.28165 20.064 19.894 20.176 0 17 7 4 0 0 0 0.030879 1 6528 68.033 47.049 1 1.4458 1.4779 0 31409000 14747000 16662000 22243 684 8363 8554 34931 34931 LLPGHPR 7 0 1 Unmodified _LLPGHPR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 395.8753 2 395.24013 788.465707 95765.63 -0.33838 -0.00013374 0.33579 0.00013272 -0.0025934 -1.025E-06 395.240180811227 400.244291752881 19.767 0.20807 19.767 19.657 19.865 -1.9073E-06 23 8 5 0 0 0 0.025889 1 6087 88.627 61.31 1 0.96664 1.0335 0 24899000 12662000 12237000 22244 684 8363 8554 34932 34932 LLPGPENHR 9 0 1 Unmodified _LLPGPENHR_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8;E7EV54;B4DEX7 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 348.1936 3 344.857686 1031.55123 103986.6 -0.029877 -1.0303E-05 -0.26814 -9.2468E-05 -0.29801 -0.00010277 344.85752892544 348.193606997479 23.66 0.25059 23.66 23.542 23.792 0 25 9 4 0 0 0 0.015203 2 9534 38.276 34.206 1 1.1136 1.1229 0 9399100 4324500 5074600 22245 746 8364 8555 34933;34934 34934 LLPGYYMNLNQNPR 14 0 1 Oxidation (M) _LLPGYYM(ox)NLNQNPR_ LLPGYYM(1)NLNQNPR LLPGYYM(46.61)NLNQNPR 0 1 0 A6PW57;Q99755;Q7KYT4;B4DVZ9;O14986;O60331 A6PW57 A6PW57 PIP5K1A;STM7;PIP5K1B;PIP5K1C Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Phosphatidylinositol 4-phosphate 5-kinase type-1 beta;Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 859.9312 2 854.927414 1707.84028 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.796 1 75.796 75.296 76.296 0 0 0 0 0.0073555 1 44615 46.606 34.875 1 22246 692 8365 8556 34935 34935 533 LLPHQLYGVVPQA 13 0 0 Unmodified _LLPHQLYGVVPQA_ 0 0 0 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;P18887;B2RCY5 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.9089 2 717.908819 1433.80309 NaN NaN NaN 0.78267 0.00056188 NaN NaN NaN NaN 100.28 0.645 100.28 100.03 100.67 7.6294E-06 0 0 0 0.0016336 1 61394 74.464 63.707 1 22247 58 8366 8557 34936 34936 LLPHQLYGVVPQA 13 0 0 Unmodified _LLPHQLYGVVPQA_ 0 0 0 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;P18887;B2RCY5 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.9113 2 717.908819 1433.80309 NaN NaN NaN 1.1733 0.00084233 NaN NaN NaN NaN 99.431 0.52673 99.431 99.173 99.699 0 0 0 0 0.0063164 1 62242 55.064 44.312 1 22248 58 8366 8557 34937 34937 LLPHQLYGVVPQA 13 0 0 Unmodified _LLPHQLYGVVPQA_ 0 0 0 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;P18887;B2RCY5 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.9087 2 717.908819 1433.80309 NaN NaN NaN 0.7437 0.00053391 NaN NaN NaN NaN 112.39 0.50696 112.39 112.25 112.75 7.6294E-06 0 0 0 0.052043 1 64389 39.848 23.471 1 22249 58 8366 8557 34938 34938 LLPLEEHYR 9 0 1 Unmodified _LLPLEEHYR_ 0 0 0 A0A024R0S6;Q9NZN4;Q8NCJ3;B4DLA1;C9JIJ3;C9IZH1;B2R5U3;A0A024R571;Q9H4M9;C9JC03;B4DZH9;Q9NZN3 A0A024R0S6;B2R5U3 A0A024R0S6 EHD2;EHD1;EHD3 EH domain-containing protein 2;EH domain-containing protein 1;EH domain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 390.5497 3 390.548629 1168.62406 100661.8 0.25553 9.9797E-05 0.030492 1.1909E-05 0.28602 0.00011171 390.548668145057 393.884759353549 55.694 0.29321 55.694 55.497 55.79 0 56 21 5 0 0 0 0.0018525 2 31336 66.692 64.28 1 1.8239 1.8567 0 14872000 4982700 9888900 22250 57;172 8367 8558 34939;34940 34940 LLPLEEHYR 9 0 1 Unmodified _LLPLEEHYR_ 0 0 0 A0A024R0S6;Q9NZN4;Q8NCJ3;B4DLA1;C9JIJ3;C9IZH1;B2R5U3;A0A024R571;Q9H4M9;C9JC03;B4DZH9;Q9NZN3 A0A024R0S6;B2R5U3 A0A024R0S6 EHD2;EHD1;EHD3 EH domain-containing protein 2;EH domain-containing protein 1;EH domain-containing protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.8845 3 390.548629 1168.62406 NaN NaN NaN 0.60527 0.00023639 NaN NaN NaN NaN 54.314 0.54778 54.314 54.032 54.579 0 0 0 0 0.0030492 1 30980 66.621 62.078 1 NaN NaN 0 4865000 0 4865000 22251 57;172 8367 8558 34941 34941 LLPLQR 6 0 1 Unmodified _LLPLQR_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 370.2449 2 370.244881 738.475209 99070.1 0.30178 0.00011173 0.26521 9.8192E-05 0.56699 0.00020993 370.244888536691 375.248981576362 51.48 0.74303 51.48 51.181 51.924 0 259 66 7 0 0 0 0.042388 1 28459 105.82 27.82 1 0.82386 0.93621 0 111110000 58191000 52914000 22252 387 8368 8559 34942 34942 LLPPEDTQELIFK 13 1 0 Unmodified _LLPPEDTQELIFK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.9323 2 771.924332 1541.83411 NaN NaN NaN -1.5546 -0.0012 NaN NaN NaN NaN 108.03 0.83644 108.03 107.51 108.34 -7.6294E-06 0 0 0 0.00037217 1 67375 85.958 55.704 1 NaN NaN 0 10867000 0 10867000 22253 1392 8369 8560 34943 34943 LLPPEDTQELIFK 13 1 0 Unmodified _LLPPEDTQELIFK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.9319 2 771.924332 1541.83411 NaN NaN NaN -0.15069 -0.00011632 NaN NaN NaN NaN 107.34 0.60009 107.34 107.14 107.74 0 0 0 0 0.026976 1 68489 44.309 22.846 1 NaN NaN 0 11663000 0 11663000 22254 1392 8369 8560 34944 34944 LLPPLLQIVCK 11 1 0 Unmodified _LLPPLLQIVCK_ 0 0 0 H0YN14;D3DS63;B3KTB3;B3KT38;B3KPS9;Q59FI4;Q8TEX9;B3KPY9;Q6I9Y8;B3KSQ4;Q59H62;B3KQ33 H0YN14 H0YN14 IPO4 Importin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.4017 2 647.401784 1292.78901 78217.1 0.7098 0.00045953 -0.051542 -3.3369E-05 0.65826 0.00042616 647.401896712476 651.408926040833 124.97 0.38851 124.97 124.77 125.16 0 81 26 5 0 0 0 0.032297 1 81131 37.727 37.727 1 1.0734 1.1642 0 3402700 1387900 2014900 22255 923 8370 8561 34945 34945 LLPQGLAVYASPENK 15 1 0 Unmodified _LLPQGLAVYASPENK_ 0 0 0 Q9BYD2;B4DDZ7;B4DUJ1;Q5SZR1 Q9BYD2 Q9BYD2 MRPL9 39S ribosomal protein L9, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.4415 2 800.44068 1598.86681 71355.21 0.90172 0.00072177 -0.094444 -7.5597E-05 0.80727 0.00064617 800.440428021138 804.447669361852 95 0.34393 95 94.84 95.183 0 81 29 4 0 0 0 0.021061 1 57653 30.828 24.724 1 1.2437 1.2936 0 12408000 4542800 7865300 22256 2018 8371 8562 34946 34946 LLPQGLAVYASPENK 15 1 0 Unmodified _LLPQGLAVYASPENK_ 0 0 0 Q9BYD2;B4DDZ7;B4DUJ1;Q5SZR1 Q9BYD2 Q9BYD2 MRPL9 39S ribosomal protein L9, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.942 2 800.44068 1598.86681 69305.36 1.0294 0.000824 0.068831 5.5095E-05 1.0983 0.0008791 800.941994330145 804.949466888648 94.345 0.43424 94.345 94.048 94.483 0 97 36 4 0 0 0 0.00022025 1 58541 64.121 47.096 1 0.89516 0.92367 0 11495000 4849400 6645300 22257 2018 8371 8562 34947 34947 LLPSLIGR 8 0 1 Unmodified _LLPSLIGR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.7843 2 434.78437 867.554188 89170.96 -0.048605 -2.1133E-05 0.19788 8.6037E-05 0.14928 6.4904E-05 434.784451209098 439.788454021562 85.962 1.4685 85.962 85.568 87.037 0 558 115 8 0 0 0 0.009492 3 51509 74.415 21.98 1 0.6517 0.7725 0 533250000 308010000 225250000 22258 1415 8372 8563 34948;34949;34950 34948 LLPSLIGR 8 0 1 Unmodified _LLPSLIGR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.7846 2 434.78437 867.554188 90000.08 0.3667 0.00015944 -0.23676 -0.00010294 0.12994 5.6494E-05 434.784269293923 439.788257300007 84.904 1.1078 84.904 84.556 85.664 0 514 92 9 0 0 0 0.0023307 3 52030 100.74 43.278 1 0.6679 0.78508 0 931010000 548080000 382930000 22259 1415 8372 8563 34951;34952;34953 34952 LLPSSHVAR 9 0 1 Unmodified _LLPSSHVAR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 330.5304 3 327.194298 978.561064 104276.5 0.65201 0.00021333 -0.24262 -7.9383E-05 0.40939 0.00013395 327.194206743951 330.530269949445 24.347 0.31512 24.347 24.164 24.479 0 58 12 7 0 0 0 0.0015199 2 10101 67.993 38.52 1 1.0157 1.0568 0 21048000 10555000 10493000 22260 684 8373 8564 34954;34955 34955 LLPSSHVAR 9 0 1 Unmodified _LLPSSHVAR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 327.1943 3 327.194298 978.561064 106000.1 -0.4692 -0.00015352 0.29483 9.6465E-05 -0.17438 -5.7056E-05 327.194332177361 330.530443360686 23.859 0.26147 23.859 23.725 23.987 0 44 9 6 0 0 0 0.00379 2 9665 57.59 36.719 1 0.88923 0.96763 0 28888000 15165000 13723000 22261 684 8373 8564 34956;34957 34957 LLQAETASNSAR 12 0 1 Unmodified _LLQAETASNSAR_ 0 0 0 A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.8311 2 630.830766 1259.64698 76764.8 0.37478 0.00023642 -0.096204 -6.0688E-05 0.27857 0.00017573 630.830798166727 635.834757889427 27.12 0.43101 27.12 26.926 27.357 1.9073E-06 107 21 7 0 0 0 8.058E-09 1 12347 123.51 123.51 1 0.86414 0.88081 0 30401000 16665000 13735000 22262 186;1747 8374 8565 34958 34958 LLQAETASNSAR 12 0 1 Unmodified _LLQAETASNSAR_ 0 0 0 A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8313 2 630.830766 1259.64698 76075.02 0.88922 0.00056095 -0.07336 -4.6277E-05 0.81586 0.00051467 630.830762275725 635.834623012573 26.759 0.446 26.759 26.588 27.034 0 72 20 5 0 0 0 5.1114E-13 1 12122 134.57 134.57 1 0.80393 0.92902 0 56079000 31685000 24394000 22263 186;1747 8374 8565 34959 34959 LLQAETASNSAR 12 0 1 Unmodified _LLQAETASNSAR_ 0 0 0 A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.8351 2 630.830766 1259.64698 75609.82 0.38049 0.00024002 -0.15706 -9.9078E-05 0.22343 0.00014095 630.83077059474 635.834902403549 30.567 0.5124 30.567 30.334 30.846 0 187 34 8 0 0 0 0.00018756 2 12611 87.298 87.298 1 1.5051 1.2351 0 12187000 5569900 6617200 22264 186;1747 8374 8565 34960;34961 34960 LLQAETASNSAR 12 0 1 Unmodified _LLQAETASNSAR_ 0 0 0 A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.8353 2 630.830766 1259.64698 76325.9 0.39179 0.00024715 0.086319 5.4453E-05 0.47811 0.0003016 630.830961730152 635.834983823276 30.725 0.61817 30.725 30.403 31.021 0 171 33 8 0 0 0 0.000197 2 12231 90.108 85.377 1 1.5773 1.2842 0 9689500 3714500 5974900 22265 186;1747 8374 8565 34962;34963 34963 LLQAFLER 8 0 1 Unmodified _LLQAFLER_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2967 2 495.292559 988.570566 89601.74 0.53147 0.00026323 0.081329 4.0282E-05 0.6128 0.00030352 495.292631356986 500.296623994214 86.918 0.42569 86.918 86.658 87.083 0 88 29 5 0 0 0 0.0070613 1 52375 84.568 41.444 1 1.8484 1.8684 0 15381000 5281900 10099000 22266 1037 8375 8566 34964 34964 LLQAFLER 8 0 1 Unmodified _LLQAFLER_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2961 2 495.292559 988.570566 87690.3 0.34994 0.00017332 0.25664 0.00012711 0.60659 0.00030044 495.292572937029 500.29616308884 85.728 1.4832 85.728 85.018 86.502 7.6294E-06 378 122 8 0 0 0 0.016729 1 52746 60.91 7.7439 1 0.76584 0.85988 0 45707000 24474000 21233000 22267 1037 8375 8566 34965 34965 LLQALAQYQNHLQEQPR 17 0 1 Unmodified _LLQALAQYQNHLQEQPR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.7032 3 684.032467 2049.07557 73143.45 0.4598 0.00031452 0.83082 0.00056831 1.2906 0.00088283 684.368873959208 687.369202910293 79.338 0.72255 79.338 79.07 79.792 0 323 65 8 0 0 0 6.1255E-11 2 46943 112.34 112.34 1 0.82642 0.89537 0 49537000 26894000 22643000 22268 1997 8376 8567 34966;34967 34967 LLQALAQYQNHLQEQPR 17 0 1 Unmodified _LLQALAQYQNHLQEQPR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.7032 3 684.032467 2049.07557 73141.66 0.58336 0.00039903 -0.18841 -0.00012888 0.39494 0.00027016 684.36653981573 687.702525361976 77.984 0.57668 77.984 77.739 78.316 0 319 47 8 0 0 0 4.2011E-26 2 47194 147.64 123.91 1 0.85791 0.9922 0 68578000 35038000 33540000 22269 1997 8376 8567 34968;34969 34969 LLQALAQYQNHLQEQPR 17 0 1 Unmodified _LLQALAQYQNHLQEQPR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.7037 3 684.032467 2049.07557 73155.04 0.82143 0.00056188 -0.41338 -0.00028276 0.40805 0.00027912 684.366259373927 687.702604478455 91.079 0.83732 91.079 90.812 91.649 0 270 55 9 0 0 0 3.3005E-06 2 50470 85.563 72.715 1 0.98576 0.8106 0 17710000 8571800 9138500 22270 1997 8376 8567 34970;34971 34971 LLQALAQYQNHLQEQPR 17 0 1 Unmodified _LLQALAQYQNHLQEQPR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.3671 3 684.032467 2049.07557 72688.59 0.49639 0.00033955 -0.38112 -0.0002607 0.11527 7.8847E-05 684.366338642375 687.702671070698 90.803 0.6608 90.803 90.568 91.229 0 243 37 10 0 0 0 4.2752E-07 2 49492 87.429 87.429 1 0.93305 0.7889 0 18118000 9704000 8414200 22271 1997 8376 8567 34972;34973 34973 LLQALAQYQNHLQEQPR 17 0 1 Unmodified _LLQALAQYQNHLQEQPR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1031.0511 2 1025.54506 2049.07557 60929.13 0.23365 0.00023962 -0.019562 -2.0062E-05 0.21409 0.00021956 1025.54485042609 1030.55001650785 90.806 0.47191 90.806 90.568 91.04 0 127 24 8 0 0 0 0.00099592 1 49557 41.825 41.825 1 1.1022 0.91449 0 5634000 2502100 3131900 22272 1997 8376 8567 34974 34974 LLQAVTDLGWSR 12 0 1 Unmodified _LLQAVTDLGWSR_ 0 0 0 Q9NY93;Q53HB9;G3V0G3;F8WDT8;F8WEI3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.8792 2 679.874976 1357.7354 NaN NaN NaN 0.40458 0.00027507 NaN NaN NaN NaN 103.17 0.3109 103.17 103.06 103.37 0 0 0 0 0.00033056 2 63623 90.108 47.51 1 NaN NaN 0 5504800 0 5504800 22273 2081 8377 8568 34975;34976 34975 LLQAVTDLGWSR 12 0 1 Unmodified _LLQAVTDLGWSR_ 0 0 0 Q9NY93;Q53HB9;G3V0G3;F8WDT8;F8WEI3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.876 2 679.874976 1357.7354 75078.84 1.0599 0.00072063 0.85465 0.00058105 1.9146 0.0013017 679.875885290777 684.87912120903 102.44 0.53334 102.44 102.23 102.76 -7.6294E-06 136 42 5 0 0 0 0.00016719 2 64657 91.855 78.618 1 0.61861 0.61326 0 12074000 7062500 5011200 22274 2081 8377 8568 34977;34978 34978 LLQAVTDLGWSRPTLIQEK 19 1 1 Unmodified _LLQAVTDLGWSRPTLIQEK_ 0 0 1 Q9NY93;Q53HB9;G3V0G3;F8WDT8;F8WEI3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.7419 3 723.407311 2167.2001 72381.75 1.1664 0.00084381 0.41261 0.00029849 1.5791 0.0011423 723.741689998014 729.749143326305 108.65 0.59836 108.65 108.36 108.95 0 237 41 8 0 0 0 0.0017353 1 67825 33.36 33.36 1 0.80995 0.96503 0 48791000 25801000 22990000 22275 2081 8378 8569 34979 34979 LLQAVTDLGWSRPTLIQEK 19 1 1 Unmodified _LLQAVTDLGWSRPTLIQEK_ 0 0 1 Q9NY93;Q53HB9;G3V0G3;F8WDT8;F8WEI3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.7429 3 723.407311 2167.2001 72495.13 0.81079 0.00058653 0.18825 0.00013618 0.99904 0.00072271 723.741669619788 729.749076191519 107.92 0.58422 107.92 107.6 108.18 0 271 42 8 0 0 0 2.5372E-08 1 68902 89.261 89.261 1 0.8343 0.96722 0 35410000 20933000 14478000 22276 2081 8378 8569 34980 34980 LLQAVTDLGWSRPTLIQEK 19 1 1 Unmodified _LLQAVTDLGWSRPTLIQEK_ 0 0 1 Q9NY93;Q53HB9;G3V0G3;F8WDT8;F8WEI3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.4159 3 723.407311 2167.2001 70814.37 0.98276 0.00071094 -0.28006 -0.00020259 0.7027 0.00050834 723.741359120507 729.414585220236 119.19 0.48509 119.19 118.95 119.44 7.6294E-06 87 20 6 0 0 0 2.8269E-06 2 70428 78.794 78.794 1 1.0841 0.93977 0 16422000 8642700 7779100 22277 2081 8378 8569 34981;34982 34981 LLQAVTDLGWSRPTLIQEK 19 1 1 Unmodified _LLQAVTDLGWSRPTLIQEK_ 0 0 1 Q9NY93;Q53HB9;G3V0G3;F8WDT8;F8WEI3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.7416 3 723.407311 2167.2001 71622.38 0.91227 0.00065994 -0.039549 -2.861E-05 0.87272 0.00063133 723.741467971327 729.748979867612 118.89 0.48586 118.89 118.71 119.2 0 101 19 8 0 0 0 9.5069E-05 2 69350 46.131 46.131 1 1.4523 1.2325 0 21484000 8466400 13018000 22278 2081 8378 8569 34983;34984 34983 LLQDANYNVEK 11 1 0 Unmodified _LLQDANYNVEK_ 0 0 0 Q9H072;A0A024R5X7;O76031 Q9H072 Q9H072 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.8431 2 653.835517 1305.65648 78202.25 1.0359 0.00067734 -0.26034 -0.00017022 0.77561 0.00050712 653.8355061527 657.842271131582 48.711 0.43274 48.711 48.461 48.894 0 80 31 4 0 0 0 0.0043738 1 26489 63.076 38.921 1 2.0867 2.154 0 10972000 3186600 7785300 22279 191 8379 8570 34985 34985 LLQDANYNVEK 11 1 0 Unmodified _LLQDANYNVEK_ 0 0 0 Q9H072;A0A024R5X7;O76031 Q9H072 Q9H072 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.8455 2 653.835517 1305.65648 NaN NaN NaN 0.39704 0.0002596 NaN NaN NaN NaN 47.442 0.28151 47.442 47.269 47.55 0 0 0 0 9.7016E-05 1 26307 93.111 49.864 1 NaN NaN 0 8645400 0 8645400 22280 191 8379 8570 34986 34986 LLQDFFNGK 9 1 0 Unmodified _LLQDFFNGK_ 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652;B3KUS2 Q53FC7;E9PN89;V9HW22 V9HW22 HSPA6;HSPA8;HEL-S-72p;HSPA2 Heat shock 70 kDa protein 6;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.2947 2 541.287474 1080.5604 82043.09 1.1637 0.0006299 -0.045771 -2.4775E-05 1.1179 0.00060512 541.287297374535 545.294500292364 90.826 1.4615 90.826 90.333 91.795 0 448 119 5 0 0 0 1.0585E-07 4 54653 138.9 81.336 1 1.2681 1.4278 0 73616000 28835000 44781000 22281 1467;1248;845 8380 8571 34987;34988;34989;34990 34987 LLQDFFNGK 9 1 0 Unmodified _LLQDFFNGK_ 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652;B3KUS2 Q53FC7;E9PN89;V9HW22 V9HW22 HSPA6;HSPA8;HEL-S-72p;HSPA2 Heat shock 70 kDa protein 6;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.2952 2 541.287474 1080.5604 NaN NaN NaN -0.0070167 -3.7981E-06 NaN NaN NaN NaN 89.964 1.3612 89.964 89.308 90.669 -7.6294E-06 0 0 0 3.4241E-11 2 55298 135.84 88.776 1 NaN NaN 0 45634000 0 45634000 22282 1467;1248;845 8380 8571 34991;34992 34991 LLQDFFNGK 9 1 0 Unmodified _LLQDFFNGK_ 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652;B3KUS2 Q53FC7;E9PN89;V9HW22 V9HW22 HSPA6;HSPA8;HEL-S-72p;HSPA2 Heat shock 70 kDa protein 6;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.2949 2 541.287474 1080.5604 84566.68 0.61215 0.00033135 0.36897 0.00019972 0.98112 0.00053107 541.287232650913 545.29456951812 103.26 1.3139 103.26 102.8 104.12 7.6294E-06 254 84 6 0 0 0 0.019235 2 58429 55.531 20.706 1 1.3255 1.0492 0 4177700 1548700 2629000 22283 1467;1248;845 8380 8571 34993;34994 34993 LLQDFFNGK 9 1 0 Unmodified _LLQDFFNGK_ 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;A0A024R6B5;P54652;B3KUS2 Q53FC7;E9PN89;V9HW22 V9HW22 HSPA6;HSPA8;HEL-S-72p;HSPA2 Heat shock 70 kDa protein 6;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.2941 2 541.287474 1080.5604 83521.16 0.37018 0.00020037 0.19386 0.00010493 0.56404 0.00030531 541.287289224639 545.294617654069 103.13 1.2944 103.13 102.6 103.89 0 293 85 5 0 0 0 0.0052629 2 57540 67.169 37.793 1 1.4475 1.1671 0 4293400 2205900 2087600 22284 1467;1248;845 8380 8571 34995;34996 34995 LLQDFFNGR 9 0 1 Unmodified _LLQDFFNGR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.2944 2 555.290548 1108.56654 83020.16 0.64177 0.00035637 -0.20348 -0.00011299 0.43829 0.00024338 555.290306387957 560.294529276352 92.717 1.1778 92.717 92.163 93.341 -7.6294E-06 444 107 6 0 0 0 1.6779E-05 2 56212 137.9 137.9 1 0.84002 0.92845 0 57480000 31611000 25869000 22285 533 8381 8572 34997;34998 34998 LLQDFFNGR 9 0 1 Unmodified _LLQDFFNGR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.2947 2 555.290548 1108.56654 82526.02 0.88162 0.00048955 -0.26237 -0.00014569 0.61925 0.00034386 555.290233447998 560.294457446829 91.717 0.92573 91.717 91.373 92.299 0 377 80 6 0 0 0 8.9354E-06 2 56730 130.27 130.27 1 0.82714 0.94072 0 123490000 60006000 63487000 22286 533 8381 8572 34999;35000 35000 LLQDFFNGR 9 0 1 Unmodified _LLQDFFNGR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.2951 2 555.290548 1108.56654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.316 1 92.316 91.816 92.816 0 0 0 0 0.0030381 1 57193 77.058 36.955 1 22287 533 8381 8572 35001 35001 LLQDFFNGR 9 0 1 Unmodified _LLQDFFNGR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.295 2 555.290548 1108.56654 81644.93 0.50798 0.00028207 0.2992 0.00016614 0.80717 0.00044822 555.290832904669 560.294724428419 105.08 0.68442 105.08 104.85 105.53 0 195 43 6 0 0 0 0.0064971 2 59904 72.485 72.485 1 1.0952 0.93827 0 6087900 2905200 3182700 22288 533 8381 8572 35002;35003 35003 LLQDFFNGR 9 0 1 Unmodified _LLQDFFNGR_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.29 2 555.290548 1108.56654 86239 0.55029 0.00030557 0.25908 0.00014387 0.80937 0.00044944 555.29071858921 560.294718420492 105 0.8279 105 104.63 105.46 0 203 52 7 0 0 0 0.010842 3 58838 58.917 58.917 1 1.0287 0.87361 0 4627900 2560200 2067600 22289 533 8381 8572 35004;35005;35006 35004 LLQDFNR 7 0 1 Unmodified _LLQDFNR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2501 2 453.245609 904.476666 89275.88 0.065638 2.975E-05 0.010159 4.6043E-06 0.075796 3.4354E-05 453.245516044802 458.24981980513 46.083 0.98051 46.083 45.682 46.663 0 302 85 6 0 0 0 0.026711 2 24836 76.847 27.822 1 0.57538 0.6368 0 61008000 37627000 23381000 22290 1665 8382 8573 35007;35008 35007 LLQDLQLGDEEDAR 14 0 1 Unmodified _LLQDLQLGDEEDAR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.4088 2 807.902116 1613.78968 67733.93 0.75445 0.00060952 0.011633 9.3984E-06 0.76608 0.00061892 807.902375055023 812.906279688938 85.813 0.81874 85.813 85.466 86.285 0 399 68 8 0 0 0 2.4899E-09 1 51396 116.24 116.24 1 0.91296 1.0152 0 75335000 40180000 35155000 22291 1742 8383 8574 35009 35009 LLQDLQLGDEEDAR 14 0 1 Unmodified _LLQDLQLGDEEDAR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.9051 2 807.902116 1613.78968 67640.5 0.8334 0.0006733 -0.25246 -0.00020397 0.58093 0.00046934 807.902234477441 812.906197282893 84.906 0.89692 84.906 84.599 85.496 7.6294E-06 442 76 9 0 0 0 7.7464E-22 1 52057 149.23 141.09 1 0.92376 1.0513 0 127170000 66474000 60697000 22292 1742 8383 8574 35010 35010 LLQDLQLGDEEDAR 14 0 1 Unmodified _LLQDLQLGDEEDAR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.9065 2 807.902116 1613.78968 75284.42 0.56302 0.00045486 -0.19138 -0.00015462 0.37163 0.00030024 808.405160312613 812.90501443717 85.518 0.10469 85.518 85.447 85.552 7.6294E-06 17 7 4 0 0 0 0.00046474 1 52632 60.641 54.401 1 1.0071 1.052 0 4327600 1902600 2425000 22293 1742 8383 8574 35011 35011 LLQDLQLGDEEDAR 14 0 1 Unmodified _LLQDLQLGDEEDAR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.9021 2 807.902116 1613.78968 67193.85 0.61698 0.00049846 0.08264 6.6765E-05 0.69962 0.00056523 807.902362430515 812.906231974781 97.938 1.0212 97.938 97.542 98.563 0 355 66 8 0 0 0 0.00011593 2 55127 82.543 82.543 1 1.2939 1.0586 0 13475000 6145200 7330300 22294 1742 8383 8574 35012;35013 35013 LLQDLQLGDEEDAR 14 0 1 Unmodified _LLQDLQLGDEEDAR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 808.4051 2 807.902116 1613.78968 67626.87 0.56911 0.00045978 0.28723 0.00023205 0.85633 0.00069183 807.902405319389 812.906441575033 97.894 0.84173 97.894 97.484 98.326 7.6294E-06 308 50 8 0 0 0 0.00017099 2 54205 73.466 73.466 1 1.353 1.109 0 13538000 5644400 7893200 22295 1742 8383 8574 35014;35015 35015 LLQDQLR 7 0 1 Unmodified _LLQDQLR_ 0 0 0 J3KSW8;U6FSN9;Q6WCQ1;B9EGI2;Q8N236;H0Y2S9 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.2646 2 443.261259 884.507966 NaN NaN NaN -1.0212 -0.00045266 NaN NaN NaN NaN 40.77 0.15049 40.77 40.677 40.828 0 0 0 0 0.031834 1 21842 73.039 6.0453 1 NaN NaN 0 5212900 0 5212900 22296 1330 8384 8575 35016 35016 LLQDSLGGSAHSILIANIAPER 22 0 1 Unmodified _LLQDSLGGSAHSILIANIAPER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.7551 3 759.085008 2274.23319 71204.26 0.61664 0.00046808 0.04739 3.5973E-05 0.66403 0.00050405 759.419568211321 762.421156175755 107.94 0.48079 107.94 107.72 108.2 0 186 36 7 0 0 0 2.2038E-08 3 67291 64.87 64.87 1 0.6755 0.68079 0 17551000 8432900 9117800 22297 1745 8385 8576 35017;35018;35019 35018 LLQDSLGGSAHSILIANIAPER 22 0 1 Unmodified _LLQDSLGGSAHSILIANIAPER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.0852 3 759.085008 2274.23319 70325.05 0.86604 0.0006574 -0.29197 -0.00022163 0.57407 0.00043577 759.084688141185 762.420468209549 107.25 0.51605 107.25 107.03 107.55 0 108 33 5 0 0 0 1.565E-07 1 68337 54.672 54.672 1 0.85978 0.93172 0 27596000 13869000 13727000 22298 1745 8385 8576 35020 35020 LLQDSLGGSAHSILIANIAPER 22 0 1 Unmodified _LLQDSLGGSAHSILIANIAPER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 762.7557 3 759.085008 2274.23319 69301.69 0.79343 0.00060228 0.41885 0.00031794 1.2123 0.00092022 759.420673078769 762.421022661445 118.57 0.38983 118.57 118.42 118.81 0 110 19 10 0 0 0 5.1686E-16 1 70042 100.64 100.64 1 1.056 0.87449 0 19994000 8304700 11689000 22299 1745 8385 8576 35021 35021 LLQDSLGGSAHSILIANIAPER 22 0 1 Unmodified _LLQDSLGGSAHSILIANIAPER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.7561 3 759.085008 2274.23319 69649.25 0.77219 0.00058616 0.43039 0.00032671 1.2026 0.00091286 759.420352963045 762.755452828996 118.34 0.43522 118.34 118.16 118.59 0 112 20 9 0 0 0 1.3862E-07 1 68988 55.705 55.705 1 1.3001 1.0494 0 11351000 4922400 6428200 22300 1745 8385 8576 35022 35022 LLQDSVDFSLADAINTEFK 19 1 0 Unmodified _LLQDSVDFSLADAINTEFK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1067.543 2 1063.53623 2125.05792 59234.27 0.55957 0.00059513 0.077044 8.194E-05 0.63662 0.00067707 1064.03777232278 1068.0448097916 128.47 0.8228 128.47 128.11 128.93 0 377 54 10 0 0 0 2.5113E-17 2 83632 132.44 132.44 1 1.0941 1.2097 0 57428000 28016000 29412000 22301 1457 8386 8577 35023;35024 35023 LLQDSVDFSLADAINTEFK 19 1 0 Unmodified _LLQDSVDFSLADAINTEFK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1067.5454 2 1063.53623 2125.05792 64629.68 1.1278 0.0011994 -0.37562 -0.00039949 0.75217 0.00079996 1064.03689638264 1068.04410687246 129.69 0.40106 129.69 129.57 129.97 0 49 21 4 0 0 0 0.0047071 2 84678 45.115 45.115 1 1.112 1.1374 0 4351900 1877900 2474000 22302 1457 8386 8577 35025;35026 35026 LLQDSVDFSLADAINTEFK 19 1 0 Unmodified _LLQDSVDFSLADAINTEFK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1068.0453 2 1063.53623 2125.05792 58704.2 0.60591 0.00064441 0.072089 7.6669E-05 0.678 0.00072107 1064.03754133102 1067.54411569789 128.29 0.91551 128.29 127.87 128.79 0 371 66 10 0 0 0 1.9907E-22 4 85506 151.9 151.9 1 1.0601 1.1945 0 68422000 34387000 34034000 22303 1457 8386 8577 35027;35028;35029;35030 35028 LLQDSVDFSLADAINTEFK 19 1 0 Unmodified _LLQDSVDFSLADAINTEFK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1068.0449 2 1063.53623 2125.05792 57683.61 0.71607 0.00076156 0.18359 0.00019526 0.89966 0.00095682 1064.03637797971 1068.04572252994 133.17 0.18701 133.17 133.08 133.26 0 17 5 5 0 0 0 3.8138E-05 2 89404 51.726 48.859 1 1.2197 1.2472 0 31625000 14447000 17178000 22304 1457 8386 8577 35031;35032 35031 LLQDSVDFSLADAINTEFK 19 1 0 Unmodified _LLQDSVDFSLADAINTEFK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.0358 2 1063.53623 2125.05792 NaN NaN NaN -0.27984 -0.00029762 NaN NaN NaN NaN 128.81 0.72311 128.81 128.74 129.46 0 0 0 0 0.00020434 2 86297 61.409 55.376 1 NaN NaN 0 10001000 10001000 0 22305 1457 8386 8577 35033;35034 35033 LLQDSVDFSLADAINTEFK 19 1 0 Unmodified _LLQDSVDFSLADAINTEFK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1063.5402 2 1063.53623 2125.05792 NaN NaN NaN 0.86254 0.00091734 NaN NaN NaN NaN 129.51 0.1151 129.51 129.48 129.6 0 0 0 0 0.0020997 1 86537 49.31 37.392 1 NaN NaN 0 2278200 2278200 0 22306 1457 8386 8577 35035 35035 LLQDSVDFSLADAINTEFK 19 1 0 Unmodified _LLQDSVDFSLADAINTEFK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1067.5481 2 1063.53623 2125.05792 NaN NaN NaN 0.11377 0.000121 NaN NaN NaN NaN 129.41 0.42729 129.41 129.24 129.67 1.5259E-05 0 0 0 5.0796E-06 1 86589 67.964 59.143 1 NaN NaN 0 2515200 0 2515200 22307 1457 8386 8577 35036 35036 LLQDSVDFSLADAINTEFK 19 1 0 Unmodified _LLQDSVDFSLADAINTEFK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1067.5441 2 1063.53623 2125.05792 57403.13 0.41769 0.00044423 0.086815 9.233E-05 0.5045 0.00053656 1064.03657542593 1068.04399950153 134.74 0.35782 134.74 134.59 134.95 0 22 7 9 0 0 0 4.0692E-08 1 81531 92.063 92.063 1 4.4059 3.7362 0 65864000 12565000 53299000 22308 1457 8386 8577 35037 35037 LLQEALK 7 1 0 Unmodified _LLQEALK_ 0 0 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 407.7553 2 407.755278 813.496004 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.937 1 44.937 44.437 45.437 0 0 0 0 0.014517 1 24174 86.086 0 1 22309 918 8387 8578 35038 35038 LLQEALK 7 1 0 Unmodified _LLQEALK_ 0 0 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.2569 2 407.755278 813.496004 96004.91 0.28022 0.00011426 0.038711 1.5785E-05 0.31893 0.00013005 407.75517984535 411.762328990004 44.229 0.82732 44.229 43.929 44.757 0 245 72 5 0 0 0 0.026953 2 24065 86.086 0 1 0.84627 0.93963 0 49297000 27810000 21486000 22310 918 8387 8578 35039;35040 35039 LLQELSHPNIIGLLDAFGHK 20 1 0 Unmodified _LLQELSHPNIIGLLDAFGHK_ 0 0 0 D6RAD4;A0A0S2Z3F9;P50613 D6RAD4 D6RAD4 CDK7 Cyclin-dependent kinase 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.5618 4 554.561298 2214.21609 80291.73 0.9029 0.00050071 -0.48917 -0.00027127 0.41373 0.00022944 554.561001336155 556.815298849046 132.29 0.31149 132.29 132.14 132.46 0 104 21 7 0 0 0 0.011235 1 86370 24.3 24.3 1 0.94512 0.93325 0 9322200 5245700 4076600 22311 547 8388 8579 35041 35041 LLQELSHPNIIGLLDAFGHK 20 1 0 Unmodified _LLQELSHPNIIGLLDAFGHK_ 0 0 0 D6RAD4;A0A0S2Z3F9;P50613 D6RAD4 D6RAD4 CDK7 Cyclin-dependent kinase 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.816 4 554.561298 2214.21609 80854.5 0.82913 0.00045981 -0.056892 -3.155E-05 0.77224 0.00042826 554.812339034743 556.815269888919 132.18 0.38145 132.18 131.98 132.36 0 136 23 9 0 0 0 0.011235 1 88484 24.3 24.3 1 0.88739 0.89646 0 13197000 7379300 5817700 22312 547 8388 8579 35042 35042 LLQETMYMTVSIIDR 15 0 1 2 Oxidation (M) _LLQETM(ox)YM(ox)TVSIIDR_ LLQETM(1)YM(1)TVSIIDR LLQETM(89.3)YM(89.3)TVSIIDR 0 2 0 P14635;E9PC90;H1UBN2;H0YA62 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 927.9667 2 922.960262 1843.90597 62991.59 0.48575 0.00044833 1.201 0.0011085 1.6867 0.0015568 922.961848654176 927.966154641262 93.628 0.61334 93.628 93.326 93.94 7.6294E-06 174 54 5 0 0 0 1.7802E-05 2 57988 89.301 75.337 1 1.3684 1.3884 0 20294000 9790200 10504000 22313 1483 8389 8580 35043;35044 35043 1241;1242 LLQFPELR 8 0 1 Unmodified _LLQFPELR_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.3006 2 508.300384 1014.58622 NaN NaN NaN 0.4035 0.0002051 NaN NaN NaN NaN 101.53 0.48367 101.53 101.24 101.72 0 0 0 0 0.004916 1 62497 89.55 10.434 1 NaN NaN 0 2434600 2434600 0 22314 1977 8390 8581 35045 35045 LLQFPELR 8 0 1 Unmodified _LLQFPELR_ 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.301 2 508.300384 1014.58622 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.7 1 100.7 100.2 101.2 -7.6294E-06 0 0 0 0.0016704 1 63297 102.71 10.807 1 22315 1977 8390 8581 35046 35046 LLQFYAETCPAPER 14 0 1 Unmodified _LLQFYAETCPAPER_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.915 2 847.913972 1693.81339 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.941 1 86.941 86.441 87.441 0 0 0 0 1.1222E-10 1 52446 112.15 85.474 1 22316 1088 8391 8582 35047 35047 LLQFYAETCPAPER 14 0 1 Unmodified _LLQFYAETCPAPER_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 852.9199 2 847.913972 1693.81339 67514.53 0.75227 0.00063786 -0.13036 -0.00011053 0.62191 0.00052733 848.415601668912 853.419655499181 99.244 0.52942 99.244 98.953 99.482 0 78 28 4 0 0 0 0.0011912 2 56021 55.452 55.452 1 1.4392 1.2494 0 2358000 1017700 1340300 22317 1088 8391 8582 35048;35049 35048 LLQIIER 7 0 1 Unmodified _LLQIIER_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.7816 2 442.781828 883.549102 91847.23 -0.031117 -1.3778E-05 -0.4129 -0.00018283 -0.44402 -0.0001966 442.781736018912 447.785348526672 72.783 0.72399 72.783 72.35 73.074 0 228 53 8 0 0 0 0.026792 2 42602 79.116 12.827 1 0.72669 0.81425 0 90403000 52116000 38287000 22318 1665 8392 8583 35050;35051 35050 LLQIIER 7 0 1 Unmodified _LLQIIER_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.7813 2 442.781828 883.549102 91194.42 -0.22763 -0.00010079 -0.16427 -7.2738E-05 -0.3919 -0.00017353 442.781890258267 447.785520596283 71.421 0.69254 71.421 71.004 71.696 0 194 50 8 0 0 0 0.029647 1 42748 69.998 1.5138 1 0.80291 0.91383 0 127620000 71024000 56596000 22319 1665 8392 8583 35052 35052 LLQIIER 7 0 1 Unmodified _LLQIIER_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 442.7816 2 442.781828 883.549102 90006.59 -0.090268 -3.9969E-05 0.36 0.0001594 0.26974 0.00011943 442.781878927628 447.785949961733 83.105 0.56799 83.105 82.888 83.456 0 115 31 6 0 0 0 0.034246 1 45316 62.659 4.4912 1 0.38049 0.32428 0 8953900 6526000 2427900 22320 1665 8392 8583 35053 35053 LLQLTEK 7 1 0 Unmodified _LLQLTEK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.7606 2 422.760561 843.506569 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.509 1 50.509 50.009 51.009 3.8147E-06 0 0 0 0.013149 1 27881 82.305 16.502 1 22321 415 8393 8584 35054 35054 LLQLTEK 7 1 0 Unmodified _LLQLTEK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.7608 2 422.760561 843.506569 92466.02 -0.12314 -5.206E-05 1.5196 0.00064243 1.3965 0.00059037 422.760513074222 426.768596375897 49.119 0.68779 49.119 48.928 49.616 0 127 57 4 0 0 0 0.041633 1 27629 58.917 7.13 1 2.1789 2.3408 0 22837000 6626700 16210000 22322 415 8393 8584 35055 35055 LLQLVEDR 8 0 1 Unmodified _LLQLVEDR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.2911 2 493.287474 984.560395 88525.33 0.25139 0.00012401 0.3905 0.00019263 0.64189 0.00031664 493.287776266665 498.291581113645 71.12 0.90511 71.12 70.613 71.518 0 382 74 9 0 0 0 0.0036078 1 41192 96.253 43.57 1 1.6968 1.8843 0 71139000 27846000 43292000 22323 1009 8394 8585 35056 35056 LLQLVEDR 8 0 1 Unmodified _LLQLVEDR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.2916 2 493.287474 984.560395 86031.59 0.17762 8.762E-05 0.28925 0.00014268 0.46688 0.0002303 493.287616676488 498.291599122508 69.745 0.9159 69.745 69.351 70.266 0 386 75 8 0 0 0 0.0013457 2 41388 109.86 46.703 1 1.6837 1.9412 0 72280000 27137000 45142000 22324 1009 8394 8585 35057;35058 35057 LLQLVEDR 8 0 1 Unmodified _LLQLVEDR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.2878 2 493.287474 984.560395 87499.73 0.13793 6.8039E-05 0.24933 0.00012299 0.38726 0.00019103 493.28757996911 498.291611619212 80.759 0.84675 80.759 80.428 81.274 -7.6294E-06 245 57 7 0 0 0 0.0036078 2 43642 96.253 35.292 1 1.0847 0.88904 0 12696000 5811600 6884500 22325 1009 8394 8585 35059;35060 35060 LLQLVEDR 8 0 1 Unmodified _LLQLVEDR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.2914 2 493.287474 984.560395 86936.09 0.24417 0.00012044 0.2105 0.00010383 0.45466 0.00022428 493.287497292851 498.291565845357 80.925 0.98475 80.925 80.549 81.534 0 249 65 7 0 0 0 0.014638 1 42801 62.546 16.176 1 1.1113 0.92395 0 6030600 2916500 3114100 22326 1009 8394 8585 35061 35061 LLQQEEEIK 9 1 0 Unmodified _LLQQEEEIK_ 0 0 0 P54136;E5RJM9;E5RH09 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.316 2 565.308603 1128.60265 82314.19 0.60484 0.00034192 -0.37026 -0.00020931 0.23458 0.00013261 565.308353803017 569.315595185118 40.49 0.5827 40.49 40.357 40.94 0 173 52 6 0 0 0 0.00039893 1 21166 99.802 53.376 1 1.549 1.6666 0 40394000 15065000 25329000 22327 1609 8395 8586 35062 35062 LLQQEEEIK 9 1 0 Unmodified _LLQQEEEIK_ 0 0 0 P54136;E5RJM9;E5RH09 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.3163 2 565.308603 1128.60265 80781.66 0.76149 0.00043048 -0.50154 -0.00028353 0.25995 0.00014695 565.308160150718 569.315455537303 39.407 0.50484 39.407 39.278 39.783 0 165 43 5 0 0 0 9.0351E-05 1 20866 110.41 55.858 1 1.5158 1.6817 0 48305000 16826000 31478000 22328 1609 8395 8586 35063 35063 LLQQGTAPAQAK 12 1 0 Unmodified _LLQQGTAPAQAK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3558 2 613.348594 1224.68264 77661.05 0.5978 0.00036666 0.0019191 1.1771E-06 0.59971 0.00036783 613.348639461957 617.355654623687 26.329 0.37889 26.329 26.16 26.539 0 111 23 7 0 0 0 4.2647E-08 2 11712 131.52 131.52 1 0.75571 0.83976 0 60064000 34897000 25167000 22329 229 8396 8587 35064;35065 35064 LLQQGTAPAQAK 12 1 0 Unmodified _LLQQGTAPAQAK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.3563 2 613.348594 1224.68264 76152.43 0.59179 0.00036297 -0.18213 -0.00011171 0.40966 0.00025127 613.348518819004 617.355417182572 25.991 0.30775 25.991 25.877 26.185 1.9073E-06 76 15 7 0 0 0 4.1983E-18 2 11516 147.78 147.78 1 0.70835 0.79861 0 61456000 29762000 31694000 22330 229 8396 8587 35066;35067 35067 LLQQGTAPAQAK 12 1 0 Unmodified _LLQQGTAPAQAK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.3559 2 613.348594 1224.68264 76932.66 0.22274 0.00013662 -0.024389 -1.4959E-05 0.19835 0.00012166 613.34867897056 617.35551238264 29.514 0.46793 29.514 29.237 29.705 0 161 31 7 0 0 0 2.3758E-05 1 11971 101.65 101.65 1 1.8772 1.5046 0 7433300 2690300 4743100 22331 229 8396 8587 35068 35068 LLQQGTAPAQAK 12 1 0 Unmodified _LLQQGTAPAQAK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.8498 2 613.348594 1224.68264 76917.35 0.091437 5.6083E-05 0.36497 0.00022386 0.45641 0.00027994 613.348676337642 617.85756609336 29.68 0.41439 29.68 29.482 29.897 0 99 27 5 0 0 0 0.0054119 1 11594 62.823 62.823 1 1.6304 1.3302 0 6067200 2908700 3158600 22332 229 8396 8587 35069 35069 LLQQLFLK 8 1 0 Unmodified _LLQQLFLK_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.8281 2 501.820953 1001.62735 NaN NaN NaN -0.023255 -1.167E-05 NaN NaN NaN NaN 100.95 0.98982 100.95 100.56 101.55 0 0 0 0 0.013314 1 61838 72.234 52.597 1 NaN NaN 0 14165000 0 14165000 22333 2094 8397 8588 35070 35070 LLQQLFLK 8 1 0 Unmodified _LLQQLFLK_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.3297 2 501.820953 1001.62735 88009.31 0.36136 0.00018134 0.020226 1.015E-05 0.38159 0.00019149 501.82088395242 505.827975127942 100.07 0.84888 100.07 99.642 100.49 7.6294E-06 218 67 5 0 0 0 0.0056884 2 62955 89.673 61.251 1 2.2708 2.3199 0 11973000 3603000 8370300 22334 2094 8397 8588 35071;35072 35072 LLQQLFLK 8 1 0 Unmodified _LLQQLFLK_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.8289 2 501.820953 1001.62735 89905.13 0.74806 0.00037539 0.062756 3.1493E-05 0.81082 0.00040689 501.820886485252 505.827983431108 113.48 0.59052 113.48 113.17 113.76 7.6294E-06 101 29 5 0 0 0 0.023819 1 66036 56.27 28.436 1 2.4246 1.9554 0 2795800 928110 1867700 22335 2094 8397 8588 35073 35073 LLQQLFLK 8 1 0 Unmodified _LLQQLFLK_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.8283 2 501.820953 1001.62735 87721.09 0.35173 0.00017651 0.14903 7.4788E-05 0.50076 0.00025129 501.82116262309 505.827991640267 113.24 0.58193 113.24 112.91 113.5 0 88 28 5 0 0 0 0.012558 1 64988 67.344 43.487 1 2.8332 2.2547 0 3107300 725810 2381500 22336 2094 8397 8588 35074 35074 LLQQLR 6 0 1 Unmodified _LLQQLR_ 0 0 0 B4DMM1;A0A0S2Z4Z2;H3BP71;A8K6K1;A0A0S2Z537;A0A024QZG0;O75150;B4E313;B4DEN2;B4DFU2 B4DMM1 B4DMM1 RNF40 E3 ubiquitin-protein ligase BRE1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 385.7475 2 385.747788 769.481023 96209.55 0.43716 0.00016863 0.035538 1.3709E-05 0.4727 0.00018234 385.747692271708 390.751803546343 35.891 0.91916 35.891 35.491 36.41 0 352 87 6 0 0 0 0.035252 1 18025 116.12 0 1 0.71289 0.79417 0 81772000 48235000 33537000 22337 21 8398 8589 35075 35075 LLQQLR 6 0 1 Unmodified _LLQQLR_ 0 0 0 B4DMM1;A0A0S2Z4Z2;H3BP71;A8K6K1;A0A0S2Z537;A0A024QZG0;O75150;B4E313;B4DEN2;B4DFU2 B4DMM1 B4DMM1 RNF40 E3 ubiquitin-protein ligase BRE1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 385.7482 2 385.747788 769.481023 95417.16 0.054204 2.0909E-05 0.508 0.00019596 0.56221 0.00021687 385.747805086445 390.752034862998 33.176 1.1463 33.176 32.735 33.881 0 443 99 6 0 0 0 0.026175 1 16494 130.16 0 1 0.8973 1.023 0 137750000 69587000 68163000 22338 21 8398 8589 35076 35076 LLQQLR 6 0 1 Unmodified _LLQQLR_ 0 0 0 B4DMM1;A0A0S2Z4Z2;H3BP71;A8K6K1;A0A0S2Z537;A0A024QZG0;O75150;B4E313;B4DEN2;B4DFU2 B4DMM1 B4DMM1 RNF40 E3 ubiquitin-protein ligase BRE1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 385.7477 2 385.747788 769.481023 96198.68 0.4417 0.00017038 -0.064267 -2.4791E-05 0.37743 0.00014559 385.747692943083 390.751765554332 35.028 0.61003 35.028 34.723 35.333 0 216 53 6 0 0 0 0.037846 1 17737 109.6 0 1 0.72499 0.83164 0 181470000 102980000 78484000 22339 21 8398 8589 35077 35077 LLQQQNDITGLSR 13 0 1 Unmodified _LLQQQNDITGLSR_ 0 0 0 H0Y612;A0A024R0F6;Q9UPN9;B3KN30 H0Y612 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.4094 2 743.404629 1484.79471 NaN NaN NaN 0.2497 0.00018563 NaN NaN NaN NaN 65.311 0.47646 65.311 65.076 65.553 0 0 0 0 1.5807E-09 1 37636 116.23 52.747 1 NaN NaN 0 4486700 0 4486700 22340 45 8399 8590 35078 35078 LLQQQNDITGLSR 13 0 1 Unmodified _LLQQQNDITGLSR_ 0 0 0 H0Y612;A0A024R0F6;Q9UPN9;B3KN30 H0Y612 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.4082 2 743.404629 1484.79471 72623.09 0.56989 0.00042366 0.15815 0.00011757 0.72804 0.00054123 743.404955459464 748.408769500469 64.174 0.39405 64.174 63.995 64.389 0 106 35 4 0 0 0 9.6856E-14 1 37717 133.81 112.44 1 1.4959 1.5121 0 9826400 2219300 7607100 22341 45 8399 8590 35079 35079 LLQQQNDITGLSR 13 0 1 Unmodified _LLQQQNDITGLSR_ 0 0 0 H0Y612;A0A024R0F6;Q9UPN9;B3KN30 H0Y612 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.4053 2 743.404629 1484.79471 72142.3 0.8105 0.00060253 -0.21143 -0.00015718 0.59908 0.00044536 743.404877928761 748.408656600863 74.893 0.4436 74.893 74.641 75.085 7.6294E-06 110 32 5 0 0 0 0.00016502 1 39830 72.2 72.2 1 1.4069 1.2347 0 1733300 848920 884390 22342 45 8399 8590 35080 35080 LLQSNPVLEAFGNAK 15 1 0 Unmodified _LLQSNPVLEAFGNAK_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.9459 2 800.938305 1599.86206 NaN NaN NaN -0.065503 -5.2464E-05 NaN NaN NaN NaN 108.61 0.56097 108.61 108.31 108.87 0 0 0 0 4.1467E-07 1 67714 100.72 65.211 1 NaN NaN 0 40929000 0 40929000 22343 1088 8400 8591 35081 35081 LLQSNPVLEAFGNAK 15 1 0 Unmodified _LLQSNPVLEAFGNAK_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.946 2 800.938305 1599.86206 NaN NaN NaN -0.026826 -2.1486E-05 NaN NaN NaN NaN 107.98 0.68689 107.98 107.66 108.34 0 0 0 0 0.0019241 1 68799 64.439 48.549 1 NaN NaN 0 27781000 0 27781000 22344 1088 8400 8591 35082 35082 LLQTAATAAQQGGQANHPTAAVVTEK 26 1 0 Unmodified _LLQTAATAAQQGGQANHPTAAVVTEK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.1238 3 859.452419 2575.33543 NaN NaN NaN -0.32277 -0.0002774 NaN NaN NaN NaN 55.807 0.42762 55.807 55.597 56.025 0 0 0 0 4.6438E-24 1 31382 98.299 77.485 1 NaN NaN 0 8140600 0 8140600 22345 1015 8401 8592 35083 35083 LLQTAATAAQQGGQANHPTAAVVTEK 26 1 0 Unmodified _LLQTAATAAQQGGQANHPTAAVVTEK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 859.7864 3 859.452419 2575.33543 67485.74 0.94522 0.00081237 -0.5519 -0.00047433 0.39332 0.00033804 859.451924418755 862.791787615006 54.59 0.40776 54.59 54.39 54.798 -3.8147E-06 128 33 6 0 0 0 1.8679E-12 2 31214 63.115 63.115 1 1.7309 1.8549 0 21282000 7199000 14083000 22346 1015 8401 8592 35084;35085 35085 LLQTAATAAQQGGQANHPTAAVVTEK 26 1 0 Unmodified _LLQTAATAAQQGGQANHPTAAVVTEK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.1241 3 859.452419 2575.33543 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.453 1 54.453 53.953 54.953 3.8147E-06 0 0 0 1.861E-11 1 31126 82.177 58.73 1 22347 1015 8401 8592 35086 35086 LLQTAATAAQQGGQANHPTAAVVTEK 26 1 0 Unmodified _LLQTAATAAQQGGQANHPTAAVVTEK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 862.7923 3 859.452419 2575.33543 66286.01 0.69661 0.0005987 -0.083823 -7.2042E-05 0.61279 0.00052666 859.786742568116 862.458279739303 65.352 0.37292 65.352 65.186 65.559 0 168 27 8 0 0 0 0.041168 2 33726 11.833 11.833 1 1.9201 1.5135 0 5561100 1809000 3752100 22348 1015 8401 8592 35087;35088 35087 LLQTAATAAQQGGQANHPTAAVVTEK 26 1 0 Unmodified _LLQTAATAAQQGGQANHPTAAVVTEK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 859.7849 3 859.452419 2575.33543 66138.09 0.3602 0.00030958 0.15786 0.00013567 0.51806 0.00044525 859.78710198621 862.458460940806 65.856 0.48723 65.856 65.621 66.109 0 197 38 9 0 0 0 0.0068476 1 33277 22.456 22.456 1 1.7458 1.4039 0 4245100 1733600 2511500 22349 1015 8401 8592 35089 35089 LLQTDDEEEAGLLELLK 17 1 0 Unmodified _LLQTDDEEEAGLLELLK_ 0 0 0 B4DUC5;P55060;B4DS32;B4DM67 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 965.0085 2 965.006778 1927.999 63255.02 0.64627 0.00062365 -0.48401 -0.00046707 0.16226 0.00015658 965.0064552003 969.515002071742 127.32 0.48923 127.32 127.09 127.58 0 153 29 9 0 0 0 9.0286E-07 2 82864 91.858 83.345 1 2.1068 2.1435 0 14005000 4074100 9931300 22350 1037 8402 8593 35090;35091 35091 LLQTDDEEEAGLLELLK 17 1 0 Unmodified _LLQTDDEEEAGLLELLK_ 0 0 0 B4DUC5;P55060;B4DS32;B4DM67 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 969.0145 2 965.006778 1927.999 63889.38 0.68404 0.0006601 -0.32133 -0.00031009 0.36271 0.00035001 965.508118105607 969.013383992358 126.94 0.48878 126.94 126.73 127.22 0 181 31 8 0 0 0 3.7001E-05 1 84658 80.312 70.123 1 2.5218 2.5189 0 15145000 4722100 10423000 22351 1037 8402 8593 35092 35092 LLQTFR 6 0 1 Unmodified _LLQTFR_ 0 0 0 P78527;B4DL41;F5GX40 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 394.2386 2 389.234513 776.454474 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.989 1 44.989 44.489 45.489 3.8147E-06 0 0 0 0.041275 1 24641 77.72 6.6529 1 22352 1665 8403 8594 35093 35093 LLQVASPFLEPHLVR 15 0 1 Unmodified _LLQVASPFLEPHLVR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.341 3 573.669918 1717.98793 81895.5 0.4784 0.00027444 0.13376 7.6732E-05 0.61215 0.00035117 574.004166937726 577.006082295678 109.81 0.70882 109.81 109.47 110.18 0 236 52 6 0 0 0 6.895E-05 3 69053 55.841 55.841 1 1.3477 1.3809 0 19183000 6475500 12707000 22353 39 8404 8595 35094;35095;35096 35096 LLQVASPFLEPHLVR 15 0 1 Unmodified _LLQVASPFLEPHLVR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3401 3 573.669918 1717.98793 81642.32 0.79625 0.00045679 -0.27705 -0.00015893 0.51921 0.00029785 573.669752432656 577.005839097472 108.84 0.58318 108.84 108.6 109.19 0 220 43 6 0 0 0 0.00015299 2 69624 52.254 52.254 1 1.3529 1.4313 0 23639000 7956800 15682000 22354 39 8404 8595 35097;35098 35097 LLQVASPFLEPHLVR 15 0 1 Unmodified _LLQVASPFLEPHLVR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.0058 3 573.669918 1717.98793 80823.57 0.60721 0.00034834 -0.10642 -6.1047E-05 0.5008 0.00028729 574.004125983276 577.005915701913 119.77 0.35989 119.77 119.56 119.92 -7.6294E-06 65 15 6 0 0 0 0.00081717 1 70013 33.301 33.301 1 1.4118 1.2148 0 3375200 1167000 2208100 22355 39 8404 8595 35099 35099 LLQVVEEPQALAAFLR 16 0 1 Unmodified _LLQVVEEPQALAAFLR_ 0 0 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6;M0QX71 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.0214 2 899.017086 1796.01962 64858 0.76728 0.0006898 0.36638 0.00032938 1.1337 0.0010192 899.017472704605 904.021362341946 131.71 0.63931 131.71 131.38 132.02 0 249 41 8 0 0 0 3.2264E-06 2 85875 112.5 92.292 1 0.84256 0.87733 0 38277000 19543000 18734000 22356 1922 8405 8596 35100;35101 35101 LLQVVEEPQALAAFLR 16 0 1 Unmodified _LLQVVEEPQALAAFLR_ 0 0 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6;M0QX71 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.0226 2 899.017086 1796.01962 64683.54 1.1004 0.00098925 -0.082817 -7.4454E-05 1.0175 0.00091479 899.518200133821 904.020984466772 131.25 0.62347 131.25 130.93 131.55 0 292 47 8 0 0 0 3.3286E-06 2 87647 110.66 95.122 1 0.85422 0.96633 0 47650000 26487000 21162000 22357 1922 8405 8596 35102;35103 35102 LLQYSDALEHLLTTGQGVVLER 22 0 1 Unmodified _LLQYSDALEHLLTTGQGVVLER_ 0 0 0 Q8N1B9;Q59FM0;C9J6X0;Q53SW4;Q7Z518;A8K413;A0A087WXC5;A0A024R4B3;E7ESZ7;O95299 Q8N1B9 Q8N1B9 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.7821 3 819.111223 2454.31184 68662.38 1.0844 0.00088825 -0.50693 -0.00041523 0.57748 0.00047302 819.111202685348 822.781267943726 126.79 0.74346 126.79 126.33 127.07 0 138 45 5 0 0 0 9.2548E-08 3 84451 58.366 54.111 1 1.7835 1.8255 0 5078000 1289300 3788700 22358 152 8406 8597 35104;35105;35106 35105 LLRSDAEAVSTR 12 0 2 Unmodified _LLRSDAEAVSTR_ 0 0 1 A0A024RCI3;Q5H9L4 A0A024RCI3 A0A024RCI3 TAF7L Transcription initiation factor TFIID subunit 7-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.5806 3 439.908886 1316.70483 90081.84 -0.013195 -5.8047E-06 -0.39168 -0.0001723 -0.40488 -0.00017811 439.908609177211 446.580910143511 32.803 0.51759 32.803 32.6 33.118 0 191 47 7 0 0 0 0.0032569 1 16320 37.18 7.2445 1 0.86803 1.0005 0 62693000 31157000 31535000 22359 361 8407 8598 35107 35107 LLSAGATR 8 0 1 Unmodified _LLSAGATR_ 0 0 0 Q53FW2;P60891;B1ALA9;B7ZB02 Q53FW2 Q53FW2 PRPS1 Ribose-phosphate pyrophosphokinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 394.7348 2 394.734877 787.455202 99266.34 0.32866 0.00012973 0.21287 8.4028E-05 0.54153 0.00021376 394.734745855245 399.739098366349 24.4 0.29167 24.4 24.216 24.508 0 35 11 5 0 0 0 0.042651 1 10175 46.426 15.136 1 2.0282 2.0929 0 10250000 3613100 6636500 22360 1626 8408 8599 35108 35108 LLSDFLDSEVSELR 14 0 1 Unmodified _LLSDFLDSEVSELR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.9225 2 811.917235 1621.81992 67404.51 0.89929 0.00073015 0.50802 0.00041247 1.4073 0.0011426 811.917559896852 816.921805274381 120.87 1.1017 120.87 120.52 121.62 7.6294E-06 444 76 11 0 0 0 2.6808E-21 3 77815 145.91 116.96 1 0.84331 0.99719 0 270630000 145520000 125110000 22361 1995 8409 8600 35109;35110;35111 35110 LLSDFLDSEVSELR 14 0 1 Unmodified _LLSDFLDSEVSELR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.42 2 811.917235 1621.81992 NaN NaN NaN 0.13601 0.00011043 NaN NaN NaN NaN 121.69 0.22924 121.69 121.59 121.82 0 0 0 0 0.015381 1 78694 48.44 26.354 1 NaN NaN 0 2226400 2226400 0 22362 1995 8409 8600 35112 35112 LLSDFLDSEVSELR 14 0 1 Unmodified _LLSDFLDSEVSELR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.9166 2 811.917235 1621.81992 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.58 1 121.58 121.08 122.08 0 0 0 0 0.0023051 1 78593 64.439 37.841 1 22363 1995 8409 8600 35113 35113 LLSDFLDSEVSELR 14 0 1 Unmodified _LLSDFLDSEVSELR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.9221 2 811.917235 1621.81992 67716.13 0.99431 0.0008073 0.62538 0.00050776 1.6197 0.0013151 811.917749356508 816.92181395799 120.43 0.78595 120.43 120.11 120.89 -7.6294E-06 391 56 9 0 0 0 1.7562E-37 3 79493 164.9 135.94 1 0.84232 0.97836 0 355180000 189540000 165640000 22364 1995 8409 8600 35114;35115;35116 35115 LLSDFLDSEVSELR 14 0 1 Unmodified _LLSDFLDSEVSELR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.9181 2 811.917235 1621.81992 68301.45 1.0528 0.00085478 -0.20013 -0.00016249 0.85266 0.00069229 811.917266554921 816.921251989137 121.2 0.40125 121.2 121.05 121.45 0 60 25 4 0 0 0 0.00010345 1 80210 84.658 71.702 1 0.69997 0.70686 0 5595900 2750500 2845400 22365 1995 8409 8600 35117 35117 LLSDFLDSEVSELR 14 0 1 Unmodified _LLSDFLDSEVSELR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.5142 2 811.917235 1621.81992 67716.1 0.65922 0.00053524 0.096884 7.8661E-05 0.75611 0.0006139 812.419380891472 817.422962498133 121.02 0.2738 121.02 120.89 121.17 -7.6294E-06 43 14 5 0 0 0 0.00038169 1 79967 70.488 50.727 1 0.92026 0.9159 0 8875900 3999400 4876400 22366 1995 8409 8600 35118 35118 LLSDFLDSEVSELR 14 0 1 Unmodified _LLSDFLDSEVSELR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.418 2 811.917235 1621.81992 67952.9 1.0967 0.00089046 0.73271 0.0005949 1.8294 0.0014854 811.917713774526 816.921928935593 132.99 1.5714 132.99 132.69 134.26 0 416 70 10 0 0 0 2.2558E-09 4 80820 117.09 87.324 1 1.489 1.2897 0 149650000 61368000 88287000 22367 1995 8409 8600 35119;35120;35121;35122 35120 LLSDFLDSEVSELR 14 0 1 Unmodified _LLSDFLDSEVSELR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 817.4221 2 811.917235 1621.81992 68069.36 1.2205 0.00099093 0.78669 0.00063873 2.0072 0.0016297 811.917765806387 816.922080105298 132.75 0.69514 132.75 132.46 133.15 0 241 31 11 0 0 0 4.5059E-05 3 80136 93.839 65.635 1 1.5546 1.3579 0 215960000 83788000 132170000 22368 1995 8409 8600 35123;35124;35125 35125 LLSDFLDSEVSELR 14 0 1 Unmodified _LLSDFLDSEVSELR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 816.9227 2 811.917235 1621.81992 NaN NaN NaN -0.045121 -3.6635E-05 NaN NaN NaN NaN 133.65 1.1208 133.65 133.07 134.19 0 0 0 0 0.0039168 1 80352 60.49 37.114 1 NaN NaN 0 5932700 0 5932700 22369 1995 8409 8600 35126 35126 LLSDFLDSEVSELR 14 0 1 Unmodified _LLSDFLDSEVSELR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 812.4193 2 811.917235 1621.81992 NaN NaN NaN 0.25561 0.00020753 NaN NaN NaN NaN 133.24 0.5166 133.24 133.09 133.61 0 0 0 0 0.004435 1 80353 58.674 36.588 1 NaN NaN 0 2037600 2037600 0 22370 1995 8409 8600 35127 35127 LLSECQYK 8 1 0 Unmodified _LLSECQYK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.7577 2 520.757692 1039.50083 86056.9 0.77389 0.00040301 -0.63904 -0.00033278 0.13485 7.0224E-05 520.757662020251 524.764076542248 31.279 0.34222 31.279 31.107 31.45 0 60 31 4 0 0 0 0.038748 1 15457 47.849 10.29 1 0.60777 0.6238 0 10639000 5415800 5222800 22371 925 8410 8601 35128 35128 LLSECQYK 8 1 0 Unmodified _LLSECQYK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.7584 2 520.757692 1039.50083 85301.97 0.26847 0.00013981 -0.048064 -2.503E-05 0.2204 0.00011478 520.758005676919 524.764484892111 30.64 0.52324 30.64 30.382 30.905 1.9073E-06 105 45 4 0 0 0 0.0077064 1 15057 81.784 33.935 1 0.95952 0.97642 0 12459000 5645100 6814100 22372 925 8410 8601 35129 35129 LLSEEVFDFSSGQITQVK 18 1 0 Unmodified _LLSEEVFDFSSGQITQVK_ 0 0 0 O14980 O14980 O14980 XPO1 Exportin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1018.0312 2 1014.02022 2026.02589 NaN NaN NaN 1.6217 0.0016445 NaN NaN NaN NaN 116.35 0.38613 116.35 116.14 116.53 0 0 0 0 0.034025 1 74231 33.782 20.802 1 NaN NaN 0 4619800 0 4619800 22373 1371 8411 8602 35130 35130 LLSEEVFDFSSGQITQVK 18 1 0 Unmodified _LLSEEVFDFSSGQITQVK_ 0 0 0 O14980 O14980 O14980 XPO1 Exportin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1018.5319 2 1014.02022 2026.02589 NaN NaN NaN 0.70151 0.00071134 NaN NaN NaN NaN 115.89 0.39497 115.89 115.67 116.06 0 0 0 0 0.0019631 2 75682 52.555 40.389 1 NaN NaN 0 7846300 0 7846300 22374 1371 8411 8602 35131;35132 35132 LLSEGVCTNDNIPSVSSINR 20 0 1 Unmodified _LLSEGVCTNDNIPSVSSINR_ 0 0 0 D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367;Q59GD2 D1KF47 D1KF47 PAX6 Paired box protein Pax-6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1088.5405 2 1088.03915 2174.06375 NaN NaN NaN 0.051308 5.5825E-05 NaN NaN NaN NaN 91.384 0.28738 91.384 91.229 91.516 0 0 0 0 0.00051084 2 55362 51.546 38.143 1 NaN NaN 0 5406900 5406900 0 22375 927 8412 8603 35133;35134 35134 LLSFMAPIDHTTMNDDAR 18 0 1 2 Oxidation (M) _LLSFM(ox)APIDHTTM(ox)NDDAR_ LLSFM(1)APIDHTTM(1)NDDAR LLSFM(50.36)APIDHTTM(50.36)NDDAR 0 2 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.6577 3 693.987318 2078.94013 NaN NaN NaN 0.51045 0.00035425 NaN NaN NaN NaN 77.262 0.56267 77.262 77.021 77.584 0 0 0 0 0.00051485 1 46755 50.358 34.416 1 NaN NaN 0 32109000 0 32109000 22376 2080 8413 8604 35135 35135 1912;1913 LLSGGSVLDIIK 12 1 0 Unmodified _LLSGGSVLDIIK_ 0 0 0 A0A024R2M7;O95747;C9JIG9 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.879 2 607.871371 1213.72819 79858.14 0.53758 0.00032678 -0.037864 -2.3016E-05 0.49972 0.00030377 607.871240351195 611.878302481389 113.28 0.56383 113.28 113.02 113.58 0 181 39 6 0 0 0 0.00016719 2 73422 91.855 63.456 1 1.9747 1.991 0 13357000 4131900 9225200 22377 117 8414 8605 35136;35137 35136 LLSGGSVLDIIK 12 1 0 Unmodified _LLSGGSVLDIIK_ 0 0 0 A0A024R2M7;O95747;C9JIG9 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.8785 2 607.871371 1213.72819 79585.99 0.64234 0.00039046 -0.04398 -2.6734E-05 0.59836 0.00036372 607.871501948179 611.878378453349 125.41 0.5198 125.41 125.12 125.64 -7.6294E-06 64 18 6 0 0 0 0.016702 1 75226 42.001 13.602 1 1.0034 0.83692 0 2240200 1236100 1004100 22378 117 8414 8605 35138 35138 LLSGGSVLDIIK 12 1 0 Unmodified _LLSGGSVLDIIK_ 0 0 0 A0A024R2M7;O95747;C9JIG9 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.8788 2 607.871371 1213.72819 80508.56 0.68574 0.00041684 0.030936 1.8805E-05 0.71668 0.00043565 607.871306030823 611.87840316522 125.19 0.5144 125.19 124.95 125.47 0 83 21 6 0 0 0 0.031554 1 74173 35.664 7.2658 1 0.9688 0.76913 0 2359500 1324800 1034700 22379 117 8414 8605 35139 35139 LLSGSLDR 8 0 1 Unmodified _LLSGSLDR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.7498 2 430.745442 859.476331 92405.13 0.33425 0.00014398 -0.28167 -0.00012133 0.052578 2.2648E-05 430.745467031441 435.749397202422 39.651 0.54235 39.651 39.428 39.971 0 163 45 5 0 0 0 0.022631 1 21033 57.047 7.4575 1 0.89132 1.0165 0 139730000 65974000 73754000 22380 1936 8415 8606 35140 35140 LLSGSLDR 8 0 1 Unmodified _LLSGSLDR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 435.7497 2 430.745442 859.476331 89854.19 -0.30724 -0.00013234 0.55812 0.00024041 0.25088 0.00010806 430.745611073895 435.749700766766 45.987 0.79501 45.987 45.751 46.546 0 236 58 7 0 0 0 0.036259 1 22052 48.756 3.7826 1 1.1532 0.95779 0 10936000 5198200 5738300 22381 1936 8415 8606 35141 35141 LLSISGK 7 1 0 Unmodified _LLSISGK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;V9HVU7;A0A024RAP1;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1;CLEC2D Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 359.2288 2 359.228897 716.44324 98196.36 -0.012482 -4.4839E-06 0.38183 0.00013716 0.36935 0.00013268 359.229023267822 363.236028877439 43.218 0.73778 43.218 42.83 43.568 0 359 60 8 0 0 0 0.014426 2 22918 100.07 0 1 1.2291 1.4725 0 946910000 454860000 492050000 22382 559;1213;2078 8416 8607 35142;35143 35143 LLSISGK 7 1 0 Unmodified _LLSISGK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;V9HVU7;A0A024RAP1;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1;CLEC2D Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 359.2296 2 359.228897 716.44324 97682.86 0.24148 8.6748E-05 0.10916 3.9214E-05 0.35065 0.00012596 359.228918023896 363.235937482549 41.771 1.2686 41.771 41.512 42.781 0 542 110 9 0 0 0 0.014183 2 22380 100.74 0 1 1.1906 1.4076 0 1555800000 650670000 905080000 22383 559;1213;2078 8416 8607 35144;35145 35145 LLSISGK 7 1 0 Unmodified _LLSISGK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;V9HVU7;A0A024RAP1;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1;CLEC2D Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 363.2361 2 359.228897 716.44324 99183.48 -0.27585 -9.9094E-05 0.36616 0.00013153 0.090305 3.244E-05 359.228980753761 363.235999789988 48.343 2.3673 48.343 48.119 50.486 0 510 191 8 0 0 0 0.032276 2 22890 65.803 0 1 0.59226 0.5063 0 110220000 69426000 40794000 22384 559;1213;2078 8416 8607 35146;35147 35146 LLSITVR 7 0 1 Unmodified _LLSITVR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 401.2628 2 401.263271 800.511988 95829.84 0.018695 7.5015E-06 0.1831 7.347E-05 0.20179 8.0971E-05 401.263228087871 406.267369424446 71.543 0.79816 71.543 71.168 71.966 0 279 70 6 0 0 0 0.023524 1 41698 90.986 11.991 1 0.64611 0.661 0 32445000 20481000 11963000 22385 1665 8417 8608 35148 35148 LLSITVR 7 0 1 Unmodified _LLSITVR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.2635 2 401.263271 800.511988 96386.69 0.047925 1.9231E-05 0.058778 2.3585E-05 0.1067 4.2816E-05 401.263173056727 406.267368847669 70.172 0.74509 70.172 69.819 70.564 0 263 60 6 0 0 0 0.027041 1 41710 86.086 8.338 1 0.64127 0.74365 0 58213000 35082000 23132000 22386 1665 8417 8608 35149 35149 LLSITVR 7 0 1 Unmodified _LLSITVR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 401.2631 2 401.263271 800.511988 93755.01 0.090319 3.6242E-05 -0.088035 -3.5325E-05 0.0022844 9.1664E-07 401.263135756168 406.267251616065 81.575 0.99324 81.575 81.156 82.149 0 193 60 5 0 0 0 0.032902 1 44185 64.803 7.3398 1 0.35389 0.30441 0 7629600 5455800 2173800 22387 1665 8417 8608 35150 35150 LLSLDR 6 0 1 Unmodified _LLSLDR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 358.7188 2 358.718696 715.422839 102890.5 0.26309 9.4377E-05 -0.15372 -5.5141E-05 0.10938 3.9236E-05 358.718649258555 363.722668963927 49.393 0.73674 49.393 49.042 49.779 0 164 48 5 0 0 0 0.040187 1 26959 107.65 0 1 0.90121 0.92191 0 34377000 17094000 17283000 22388 1745 8418 8609 35151 35151 LLSLISIALPENK 13 1 0 Unmodified _LLSLISIALPENK_ 0 0 0 Q5H924;A0A024R9Y3;A0A024R9U8;A0A024R9W5;Q7Z6Z7;Q5H935;H0Y659 Q5H924 Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.9324 2 705.93196 1409.84937 74671.22 0.81689 0.00057667 0.013737 9.6975E-06 0.83063 0.00058637 705.932074167095 709.93905509274 124.83 0.32631 124.83 124.69 125.02 0 82 22 5 0 0 0 5.8651E-05 2 81087 96.015 96.015 1 1.441 1.4557 0 5573900 2629000 2945000 22389 289 8419 8610 35152;35153 35153 LLSLISIALPENK 13 1 0 Unmodified _LLSLISIALPENK_ 0 0 0 Q5H924;A0A024R9Y3;A0A024R9U8;A0A024R9W5;Q7Z6Z7;Q5H935;H0Y659 Q5H924 Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.4408 2 705.93196 1409.84937 NaN NaN NaN -0.070468 -4.9745E-05 NaN NaN NaN NaN 124.39 0.37346 124.39 124.24 124.61 0 0 0 0 9.2191E-06 1 82708 98.943 80.503 1 NaN NaN 0 2638200 0 2638200 22390 289 8419 8610 35154 35154 LLSLISIALPENK 13 1 0 Unmodified _LLSLISIALPENK_ 0 0 0 Q5H924;A0A024R9Y3;A0A024R9U8;A0A024R9W5;Q7Z6Z7;Q5H935;H0Y659 Q5H924 Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.9332 2 705.93196 1409.84937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.41 1 124.41 123.91 124.91 0 0 0 0 1.9708E-16 1 82751 126.67 99.998 1 22391 289 8419 8610 35155 35155 LLSPGAR 7 0 1 Unmodified _LLSPGAR_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964;E7EMS6;E7EUU8;A0A1S6YJG6;F8WBW9 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 362.2229 2 357.218863 712.423173 NaN NaN NaN -0.14285 -5.1028E-05 NaN NaN NaN NaN 25.405 0.50757 25.405 25.236 25.743 0 0 0 0 0.032356 1 10986 67.035 7.394 1 NaN NaN 0 33248000 0 33248000 22392 601 8420 8611 35156 35156 LLSPGAR 7 0 1 Unmodified _LLSPGAR_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964;E7EMS6;E7EUU8;A0A1S6YJG6;F8WBW9 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 362.2228 2 357.218863 712.423173 103458.3 0.49859 0.00017811 -0.073002 -2.6078E-05 0.42559 0.00015203 357.218758669669 362.222835212985 25.162 0.50318 25.162 24.938 25.441 0 54 19 6 0 0 0 0.026743 1 10873 77.748 10.755 1 1.8071 2.0955 0 65514000 24571000 40943000 22393 601 8420 8611 35157 35157 LLSPVVPQISAPQSNK 16 1 0 Unmodified _LLSPVVPQISAPQSNK_ 0 0 0 Q8N1F7;A8K897;H3BVG0;H3BVE2;H3BRD9 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.4873 2 839.480337 1676.94612 69137.05 0.71424 0.00059959 -0.1987 -0.0001668 0.51554 0.00043279 839.479625143126 843.487467237693 97.051 0.56018 97.051 96.797 97.357 -7.6294E-06 191 50 6 0 0 0 0.00015625 3 59132 74.392 68.445 1 1.8388 1.9064 0 17054000 5512300 11541000 22394 1904 8421 8612 35158;35159;35160 35160 LLSPVVPQISAPQSNK 16 1 0 Unmodified _LLSPVVPQISAPQSNK_ 0 0 0 Q8N1F7;A8K897;H3BVG0;H3BVE2;H3BRD9 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.9896 2 839.480337 1676.94612 68096.88 0.74745 0.00062747 -0.24114 -0.00020243 0.50632 0.00042504 839.479262106841 843.487488912072 96.324 0.66497 96.324 96.077 96.742 0 244 58 7 0 0 0 0.00010618 1 59999 78.964 78.964 1 1.5563 1.57 0 28228000 11069000 17158000 22395 1904 8421 8612 35161 35161 LLSQGVIAFR 10 0 1 Unmodified _LLSQGVIAFR_ 0 0 0 D6R9R7;B4DHK6;A0A024R069;A0A0A0MTL5;Q13309 D6R9R7 D6R9R7 SKP2 S-phase kinase-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.3359 2 552.332216 1102.64988 86831.31 0.5745 0.00031731 0.26031 0.00014378 0.83481 0.00046109 552.332500246924 557.336319142164 89.466 0.3814 89.466 89.261 89.642 7.6294E-06 77 29 4 0 0 0 6.2002E-05 1 55217 98.582 63.774 1 0.9963 1.0012 0 11139000 5313800 5825400 22396 38 8422 8613 35162 35162 LLSRPQDALEGVVLSPSLEAR 21 0 2 Unmodified _LLSRPQDALEGVVLSPSLEAR_ 0 0 1 Q9NVI7;H0Y2W2 Q9NVI7 Q9NVI7 ATAD3A ATPase family AAA domain-containing protein 3A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.7602 3 750.753258 2249.23795 70538.06 0.80594 0.00060506 -0.29798 -0.00022371 0.50796 0.00038135 751.087496110709 757.759200256903 109.27 0.53416 109.27 108.98 109.52 0 184 35 8 0 0 0 9.4446E-06 1 68310 47.32 47.32 1 1.5277 1.6484 0 16104000 6452800 9650800 22397 2074 8423 8614 35163 35163 LLSRPQDALEGVVLSPSLEAR 21 0 2 Unmodified _LLSRPQDALEGVVLSPSLEAR_ 0 0 1 Q9NVI7;H0Y2W2 Q9NVI7 Q9NVI7 ATAD3A ATPase family AAA domain-containing protein 3A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.4249 3 750.753258 2249.23795 71626.35 0.56475 0.00042399 -0.44599 -0.00033483 0.11877 8.9164E-05 751.087798847135 757.424821379685 108.64 0.47742 108.64 108.34 108.82 0 162 31 8 0 0 0 8.26E-08 1 69418 61.963 61.963 1 1.4103 1.5479 0 20411000 8206600 12204000 22398 2074 8423 8614 35164 35164 LLSRPQDALEGVVLSPSLEAR 21 0 2 Unmodified _LLSRPQDALEGVVLSPSLEAR_ 0 0 1 Q9NVI7;H0Y2W2 Q9NVI7 Q9NVI7 ATAD3A ATPase family AAA domain-containing protein 3A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.087 3 750.753258 2249.23795 72066.04 0.94534 0.00070972 -0.35461 -0.00026622 0.59073 0.00044349 751.08705917276 757.759638235299 119.67 0.24973 119.67 119.59 119.84 0 45 13 5 0 0 0 0.03343 2 70950 18.251 18.251 1 1.0485 0.93829 0 3591300 1312700 2278500 22399 2074 8423 8614 35165;35166 35165 LLSRPQDALEGVVLSPSLEAR 21 0 2 Unmodified _LLSRPQDALEGVVLSPSLEAR_ 0 0 1 Q9NVI7;H0Y2W2 Q9NVI7 Q9NVI7 ATAD3A ATPase family AAA domain-containing protein 3A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.0883 3 750.753258 2249.23795 73696.42 0.61156 0.00045913 -0.077843 -5.8441E-05 0.53371 0.00040069 751.087429918659 757.424916522275 119.45 0.26096 119.45 119.32 119.58 -7.6294E-06 41 12 6 0 0 0 0.0019717 2 69845 28.412 28.412 1 1.3104 1.1874 0 5236900 1789900 3447000 22400 2074 8423 8614 35167;35168 35167 LLSSEDIEGMR 11 0 1 Oxidation (M) _LLSSEDIEGM(ox)R_ LLSSEDIEGM(1)R LLSSEDIEGM(50.35)R 0 1 0 P53582;Q5CZ91 P53582 P53582 METAP1;DKFZp781C0419 Methionine aminopeptidase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3048 2 633.305735 1264.59692 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.365 1 50.365 49.865 50.865 3.8147E-06 0 0 0 0.012381 1 27796 50.353 36.196 1 22401 1605 8424 8615 35169 35169 1393 LLSSEDIEGMR 11 0 1 Oxidation (M) _LLSSEDIEGM(ox)R_ LLSSEDIEGM(1)R LLSSEDIEGM(50.35)R 0 1 0 P53582;Q5CZ91 P53582 P53582 METAP1;DKFZp781C0419 Methionine aminopeptidase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.306 2 633.305735 1264.59692 77594.27 0.52892 0.00033497 0.85499 0.00054147 1.3839 0.00087644 633.306588475664 638.310739565681 58.274 0.73676 58.274 57.728 58.465 0 147 58 5 0 0 0 0.0042081 1 29643 50.353 46.945 1 0.29094 0.25266 0 2305600 1685000 620630 22402 1605 8424 8615 35170 35170 1393 LLSSFDFFLTDAR 13 0 1 Unmodified _LLSSFDFFLTDAR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.3983 2 766.393199 1530.77184 69084.9 0.58263 0.00044652 0.31916 0.0002446 0.90179 0.00069113 766.393533203816 771.397553558836 128.39 0.79149 128.39 128 128.79 0 460 51 11 0 0 0 1.1427E-08 2 83563 113.63 104.26 1 0.67586 0.79987 0 343900000 207220000 136680000 22403 1415 8425 8616 35171;35172 35172 LLSSFDFFLTDAR 13 0 1 Unmodified _LLSSFDFFLTDAR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.3945 2 766.393199 1530.77184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.93 1 128.93 128.43 129.43 0 0 0 0 9.6343E-05 1 84091 93.258 58.725 1 22404 1415 8425 8616 35173 35173 LLSSFDFFLTDAR 13 0 1 Unmodified _LLSSFDFFLTDAR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.0878 2 766.393199 1530.77184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.95 1 128.95 128.45 129.45 0 0 0 0 0.0041619 1 84102 61.435 42.69 1 22405 1415 8425 8616 35174 35174 LLSSFDFFLTDAR 13 0 1 Unmodified _LLSSFDFFLTDAR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.0886 2 766.393199 1530.77184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.97 1 128.97 128.47 129.47 0 0 0 0 0.0033135 1 84110 64.439 45.168 1 22406 1415 8425 8616 35175 35175 LLSSFDFFLTDAR 13 0 1 Unmodified _LLSSFDFFLTDAR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.3943 2 766.393199 1530.77184 69609.3 1.0158 0.00077847 0.052566 4.0287E-05 1.0683 0.00081875 766.393340154564 771.397368640426 128.01 1.0587 128.01 127.47 128.53 0 472 59 12 0 0 0 1.1843E-09 3 85634 124.1 109.13 1 0.68348 0.79796 0 537910000 323840000 214070000 22407 1415 8425 8616 35176;35177;35178 35177 LLSSFDFFLTDAR 13 0 1 Unmodified _LLSSFDFFLTDAR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.3973 2 766.393199 1530.77184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.69 1 128.69 128.19 129.19 0 0 0 0 1.7984E-10 1 85998 112.15 84.405 1 22408 1415 8425 8616 35179 35179 LLSSFDFFLTDAR 13 0 1 Unmodified _LLSSFDFFLTDAR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.398 2 766.393199 1530.77184 69742.84 0.78375 0.00060066 -0.18157 -0.00013915 0.60218 0.00046151 766.392867437871 771.397041450162 134.82 0.44012 134.82 134.5 134.94 0 32 10 8 0 0 0 6.6973E-07 1 82521 111.86 98.899 1 0.73446 0.63705 0 187620000 108030000 79586000 22409 1415 8425 8616 35180 35180 LLSSFDFFLTDAR 13 0 1 Unmodified _LLSSFDFFLTDAR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 771.3979 2 766.393199 1530.77184 69102.31 1.0835 0.00083041 0.10999 8.4294E-05 1.1935 0.0009147 766.393227271452 771.397103876555 134.78 0.50845 134.78 134.44 134.95 0 35 12 9 0 0 0 4.3861E-07 2 81587 112.15 102.46 1 0.66094 0.57729 0 202050000 120950000 81101000 22410 1415 8425 8616 35181;35182 35182 LLSSLGGFK 9 1 0 Unmodified _LLSSLGGFK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.274 2 461.273835 920.533118 91283.18 0.33288 0.00015355 0.56495 0.0002606 0.89783 0.00041415 461.274065129311 465.281064387503 78.112 0.64812 78.112 77.8 78.448 0 139 52 4 0 0 0 0.019948 1 46240 50.703 1.6451 1 1.4525 1.5053 0 11248000 4137500 7110500 22411 1205 8426 8617 35183 35183 LLSTCGLVQSVELQEKPDLAESPK 24 2 0 Unmodified _LLSTCGLVQSVELQEKPDLAESPK_ 0 0 1 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.4728 3 881.129954 2640.36803 63867.14 0.776 0.00068376 -0.59261 -0.00052216 0.18339 0.00016159 881.463803241164 886.806905760662 104.51 0.69057 104.51 104.15 104.84 0 408 56 10 0 0 0 4.2191E-14 1 64507 86.761 83.194 1 0.81304 0.95977 0 62729000 33952000 28777000 22412 2133 8427 8618 35184 35184 LLSTCGLVQSVELQEKPDLAESPK 24 2 0 Unmodified _LLSTCGLVQSVELQEKPDLAESPK_ 0 0 1 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.4729 3 881.129954 2640.36803 64056.13 0.16246 0.00014315 0.23599 0.00020794 0.39845 0.00035109 881.464756760284 886.472886137283 103.67 0.56438 103.67 103.42 103.98 0 392 48 10 0 0 0 3.2572E-13 2 65550 82.177 82.177 1 0.93371 1.0828 0 75629000 34443000 41185000 22413 2133 8427 8618 35185;35186 35185 LLSTCGLVQSVELQEKPDLAESPK 24 2 0 Unmodified _LLSTCGLVQSVELQEKPDLAESPK_ 0 0 1 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 881.4705 3 881.129954 2640.36803 64038.37 0.97864 0.00086231 0.53728 0.00047341 1.5159 0.0013357 881.464846863432 886.807571957423 115.86 0.49664 115.86 115.64 116.14 0 151 20 12 0 0 0 7.8827E-06 2 67891 42.705 42.705 1 1.4109 1.1936 0 90705000 38094000 52611000 22414 2133 8427 8618 35187;35188 35187 LLSTCGLVQSVELQEKPDLAESPK 24 2 0 Unmodified _LLSTCGLVQSVELQEKPDLAESPK_ 0 0 1 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 881.4646 3 881.129954 2640.36803 64418.71 0.46221 0.00040727 0.062637 5.5192E-05 0.52485 0.00046246 881.464386849121 886.807334956322 115.73 0.56053 115.73 115.45 116.01 0 182 25 13 0 0 0 2.5672E-27 2 66855 114.88 114.88 1 1.2918 1.1008 0 46481000 20687000 25794000 22415 2133 8427 8618 35189;35190 35189 LLSTLGEFLEDHFPLPDR 18 0 1 Unmodified _LLSTLGEFLEDHFPLPDR_ 0 0 0 D6RJF0;D6RHD3;Q9BS16 D6RJF0 D6RJF0 CENPK Centromere protein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.7018 3 700.365112 2098.07351 76556.13 0.86697 0.0006072 0.15667 0.00010972 1.0236 0.00071692 700.699344358729 703.701238662939 132.59 0.7756 132.59 132.22 132.99 0 127 46 4 0 0 0 0.001917 2 86481 32.55 21.437 1 0.79703 0.85472 0 3379100 2009800 1369300 22416 1203 8428 8619 35191;35192 35191 LLSVEGSTLR 10 0 1 Unmodified _LLSVEGSTLR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.8162 2 537.811313 1073.60807 83490.15 0.64758 0.00034828 -0.13505 -7.2633E-05 0.51253 0.00027564 537.811189844124 542.815242441514 66.031 0.4577 66.031 65.77 66.228 0 192 43 7 0 0 0 0.00030112 3 38000 90.761 27.196 1 1.2001 1.3334 0 72777000 35613000 37164000 22417 1088;1189 8429 8620 35193;35194;35195 35194 LLSVEGSTLR 10 0 1 Unmodified _LLSVEGSTLR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.8118 2 537.811313 1073.60807 82705.37 0.52816 0.00028405 -0.092897 -4.9961E-05 0.43526 0.00023409 537.81114586345 542.815297194137 64.845 0.47298 64.845 64.511 64.984 0 151 40 7 0 0 0 0.00060252 2 38148 84.213 23.798 1 1.1088 1.2625 0 109290000 52228000 57058000 22418 1088;1189 8429 8620 35196;35197 35197 LLSVEGSTLR 10 0 1 Unmodified _LLSVEGSTLR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.8113 2 537.811313 1073.60807 83999.41 0.58223 0.00031313 -0.30509 -0.00016408 0.27714 0.00014905 537.811135743684 542.815134978289 75.745 0.54975 75.745 75.445 75.995 0 139 37 5 0 0 0 0.041248 2 40339 38.276 14.444 1 1.7186 1.4681 0 5760600 2265900 3494700 22419 1088;1189 8429 8620 35198;35199 35199 LLSVEGSTLR 10 0 1 Unmodified _LLSVEGSTLR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.8114 2 537.811313 1073.60807 83759.48 0.4119 0.00022152 -0.12769 -6.8673E-05 0.28421 0.00015285 537.81123970189 542.815312117242 76.097 0.50734 76.097 75.816 76.323 7.6294E-06 134 32 5 0 0 0 0.041181 2 39690 38.303 15.346 1 1.9225 1.6315 0 4640700 1583800 3056800 22420 1088;1189 8429 8620 35200;35201 35201 LLSVNIR 7 0 1 Unmodified _LLSVNIR_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 412.7649 2 407.760895 813.507237 96163.41 0.20577 8.3903E-05 -0.24383 -9.9425E-05 -0.038066 -1.5522E-05 407.760849163384 412.764801441643 67.641 0.87616 67.641 67.148 68.024 0 274 74 5 0 0 0 0.026905 1 39235 82.263 0 1 2.1112 2.1688 0 25502000 7770300 17732000 22421 1454 8430 8621 35202 35202 LLTAEADK 8 1 0 Unmodified _LLTAEADK_ 0 0 0 O43660 O43660 O43660 PLRG1 Pleiotropic regulator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.7477 2 430.739825 859.465098 98469.45 -0.027778 -1.1965E-05 0.39291 0.00016924 0.36514 0.00015728 430.739981175508 434.747017298139 25.816 0.29967 25.816 25.702 26.002 1.9073E-06 48 21 4 0 0 0 0.0099928 1 11366 73.26 23.902 1 1.6478 1.6618 0 7729000 3747500 3981600 22422 1386 8431 8622 35203 35203 LLTDGYACEVR 11 0 1 Unmodified _LLTDGYACEVR_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829;A2I831 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.8169 2 648.81627 1295.61799 80560.44 0.58886 0.00038206 -1.5724 -0.0010202 -0.98355 -0.00063814 648.81493406054 653.820201468002 73.692 0.38032 73.692 73.542 73.922 7.6294E-06 45 25 4 0 0 0 0.030651 1 38229 38.567 38.567 1 0.72913 0.63732 0 933070 364800 568270 22423 655 8432 8623 35204 35204 LLTFYNLADCIAEK 14 1 0 Unmodified _LLTFYNLADCIAEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.4362 2 835.926548 1669.83854 NaN NaN NaN 1.1924 0.00099677 NaN NaN NaN NaN 132.6 0.79776 132.6 132.14 132.94 0 0 0 0 0.0015088 1 80586 70.488 50.727 1 NaN NaN 0 3496500 0 3496500 22424 897 8433 8624 35205 35205 LLTFYNLADCIAEK 14 1 0 Unmodified _LLTFYNLADCIAEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 840.4354 2 835.926548 1669.83854 64441.27 1.2137 0.0010146 0.84622 0.00070737 2.0599 0.0017219 836.429513571468 839.934818336268 132.34 0.68427 132.34 131.99 132.67 0 98 27 7 0 0 0 0.038363 1 79624 28.764 22.793 1 1.7362 1.4225 0 5389600 1444500 3945100 22425 897 8433 8624 35206 35206 LLTGELLPTDGMIR 14 0 1 Oxidation (M) _LLTGELLPTDGM(ox)IR_ LLTGELLPTDGM(1)IR LLTGELLPTDGM(70.94)IR 0 1 0 A0A090N7X1;A0A090N7Y2;Q9UG63 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.925 2 772.921266 1543.82798 70070.66 0.89294 0.00069017 -0.063893 -4.9385E-05 0.82905 0.00064079 772.920874568672 777.925270310554 104.47 0.4107 104.47 104.26 104.68 0 109 34 5 0 0 0 9.1438E-05 1 64430 70.942 70.942 1 1.6825 1.7265 0 10102000 4957700 5144200 22426 455 8434 8625 35207 35207 321 LLTLEVPGVTESRPSVLR 18 0 2 Unmodified _LLTLEVPGVTESRPSVLR_ 0 0 1 B7Z700;Q5JR04;Q9HCE1;Q9H8T8 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.0499 3 656.049235 1965.12588 75640.71 0.69451 0.00045563 -0.046457 -3.0478E-05 0.64805 0.00042515 656.383443016589 662.721493799988 108.17 0.55601 108.17 107.79 108.34 -7.6294E-06 144 41 5 0 0 0 0.0024654 1 67414 33.308 33.308 1 1.4629 1.5913 0 14251000 6049400 8201700 22427 1102 8435 8626 35208 35208 LLTLEVPGVTESRPSVLR 18 0 2 Unmodified _LLTLEVPGVTESRPSVLR_ 0 0 1 B7Z700;Q5JR04;Q9HCE1;Q9H8T8 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.384 3 656.049235 1965.12588 75747.01 0.91112 0.00059774 -0.14995 -9.8372E-05 0.76117 0.00049936 656.048938398637 662.721332918382 107.28 0.49018 107.28 107.01 107.5 7.6294E-06 143 31 6 0 0 0 0.00037547 2 68420 40.515 40.515 1 1.4164 1.5813 0 25765000 9527100 16238000 22428 1102 8435 8626 35209;35210 35210 LLTLEVPGVTESRPSVLR 18 0 2 Unmodified _LLTLEVPGVTESRPSVLR_ 0 0 1 B7Z700;Q5JR04;Q9HCE1;Q9H8T8 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.0494 3 656.049235 1965.12588 77565.81 0.84511 0.00055443 -0.15399 -0.00010102 0.69112 0.00045341 656.048815599314 662.721378236428 118.71 0.32034 118.71 118.51 118.83 -7.6294E-06 92 16 7 0 0 0 0.017441 1 70142 22.646 22.646 1 1.0991 0.95199 0 4973700 1913500 3060200 22429 1102 8435 8626 35211 35211 LLTLEVPGVTESRPSVLR 18 0 2 Unmodified _LLTLEVPGVTESRPSVLR_ 0 0 1 B7Z700;Q5JR04;Q9HCE1;Q9H8T8 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.0499 3 656.049235 1965.12588 77029.45 0.76323 0.00050072 0.049311 3.235E-05 0.81254 0.00053307 656.049086621115 662.721723666578 118.38 0.34001 118.38 118.25 118.59 0 77 16 7 0 0 0 0.002964 1 69015 32.387 32.387 1 1.1764 1.0648 0 4470300 1768500 2701900 22430 1102 8435 8626 35212 35212 LLTLPNGER 9 0 1 Unmodified _LLTLPNGER_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7968 2 506.792924 1011.57129 NaN NaN NaN -0.56806 -0.00028789 NaN NaN NaN NaN 60.424 0.31384 60.424 60.212 60.526 0 0 0 0 0.018019 1 35366 60.436 1.4552 1 NaN NaN 0 4009100 0 4009100 22431 1729 8436 8627 35213 35213 LLTQGFTNWNK 11 1 0 Unmodified _LLTQGFTNWNK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.3566 2 661.348594 1320.68264 73989.11 0.82629 0.00054647 0.26811 0.00017731 1.0944 0.00072378 661.349176294111 665.355707332642 96.168 0.89075 96.168 95.74 96.631 0 285 46 12 0 0 0 0.002424 2 53801 61.65 41.863 1 5.7204 4.6448 0 27381000 4305900 23076000 22432 1391 8437 8628 35214;35215 35214 LLTQGFTNWNK 11 1 0 Unmodified _LLTQGFTNWNK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.3561 2 661.348594 1320.68264 NaN NaN NaN -0.041199 -2.7247E-05 NaN NaN NaN NaN 96.018 1.3256 96.018 95.749 97.074 0 0 0 0 0.0027646 1 52928 71.451 47.296 1 NaN NaN 0 20352000 0 20352000 22433 1391 8437 8628 35216 35216 LLTQHENIK 9 1 0 Unmodified _LLTQHENIK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.3118 2 548.31148 1094.60841 82863.02 0.52892 0.00029001 -0.23853 -0.00013079 0.29039 0.00015922 548.31134891747 552.318312731616 23.55 0.33425 23.55 23.373 23.707 0 46 15 6 0 0 0 0.00603 1 9421 65.224 38.84 1 1.2335 1.2622 0 14350000 6282000 8067700 22434 415 8438 8629 35217 35217 LLTQHENIK 9 1 0 Unmodified _LLTQHENIK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 365.8768 3 365.876746 1094.60841 99374.74 -0.092155 -3.3717E-05 0.38494 0.00014084 0.29278 0.00010712 365.876759501085 368.548267268938 23.075 0.33161 23.075 22.937 23.268 0 55 13 6 0 0 0 0.006018 1 8993 50.473 37.353 1 1.2587 1.2676 0 27079000 11892000 15187000 22435 415 8438 8629 35218 35218 LLTQHENIK 9 1 0 Unmodified _LLTQHENIK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.3119 2 548.31148 1094.60841 83189.15 0.22775 0.00012488 0.28672 0.00015721 0.51447 0.00028209 548.3115299831 552.318613742067 23.058 0.32606 23.058 22.965 23.291 0 47 13 7 0 0 0 0.0010447 1 9014 90.761 68.048 1 1.4295 1.5149 0 23495000 10391000 13104000 22436 415 8438 8629 35219 35219 LLTQMESEK 9 1 0 Oxidation (M) _LLTQM(ox)ESEK_ LLTQM(1)ESEK LLTQM(48.79)ESEK 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.7804 2 547.773539 1093.53253 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.283 1 22.283 21.783 22.783 0 0 0 0 0.019767 1 8403 48.794 23.871 1 22437 1581 8439 8630 35220 35220 1362 LLTSFLPAQLLR 12 0 1 Unmodified _LLTSFLPAQLLR_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;A0A024R599;H0YFX4 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.9233 2 686.421562 1370.82857 75485.86 0.79828 0.00054796 -0.034172 -2.3457E-05 0.76411 0.0005245 686.922967087144 691.425624206202 127.66 0.43144 127.66 127.46 127.89 0 125 28 6 0 0 0 0.0036249 1 83146 55.567 36.787 1 1.4522 1.4866 0 6616000 2585000 4031000 22438 1072 8440 8631 35221 35221 LLTSFLPAQLLR 12 0 1 Unmodified _LLTSFLPAQLLR_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;A0A024R599;H0YFX4 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.4225 2 686.421562 1370.82857 75314.6 0.82335 0.00056517 0.083696 5.7451E-05 0.90705 0.00062262 686.42153730246 691.425696653105 127.21 0.39929 127.21 127.04 127.44 0 116 24 6 0 0 0 0.0028278 2 84844 57.598 35.512 1 1.371 1.3823 0 6320600 2451700 3868800 22439 1072 8440 8631 35222;35223 35223 LLTSQCGAAEEEFVQR 16 0 1 Unmodified _LLTSQCGAAEEEFVQR_ 0 0 0 Q86WV4;P82933 Q86WV4 Q86WV4 MRPS9 28S ribosomal protein S9, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 924.4451 2 919.441083 1836.86761 NaN NaN NaN 0.3585 0.00032962 NaN NaN NaN NaN 72.708 0.27825 72.708 72.558 72.836 0 0 0 0 1.3634E-12 1 43590 111.12 99.257 1 NaN NaN 0 7148600 0 7148600 22440 1670 8441 8632 35224 35224 LLTSYGFIQCSER 13 0 1 Unmodified _LLTSYGFIQCSER_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLD4;E9PKN4 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.3916 2 787.38759 1572.76063 NaN NaN NaN -0.81896 -0.00064484 NaN NaN NaN NaN 89.521 0.42464 89.521 89.298 89.723 0 0 0 0 9.1005E-09 2 54090 106.35 80.229 1 NaN NaN 0 7587500 0 7587500 22441 42 8442 8633 35225;35226 35226 LLTSYGFIQCSER 13 0 1 Unmodified _LLTSYGFIQCSER_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLD4;E9PKN4 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.388 2 787.38759 1572.76063 70485.88 0.62653 0.00049332 -0.31581 -0.00024866 0.31072 0.00024466 787.38674243334 792.391392641803 88.563 0.33829 88.563 88.396 88.734 -7.6294E-06 58 29 4 0 0 0 9.4817E-06 2 54628 100.72 91.035 1 2.016 2.044 0 20209000 6492400 13717000 22442 42 8442 8633 35227;35228 35228 LLTSYGFIQCSER 13 0 1 Unmodified _LLTSYGFIQCSER_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLD4;E9PKN4 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.3925 2 787.38759 1572.76063 71278.29 0.55642 0.00043812 -0.31911 -0.00025126 0.23731 0.00018686 787.387068626191 792.391962527176 102.33 0.35973 102.33 102.16 102.52 0 75 26 5 0 0 0 0.0012299 2 58118 58.676 58.676 1 1.7169 1.4526 0 2963300 1123000 1840300 22443 42 8442 8633 35229;35230 35230 LLTSYGFIQCSER 13 0 1 Unmodified _LLTSYGFIQCSER_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLD4;E9PKN4 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.3923 2 787.38759 1572.76063 71144.31 0.55119 0.000434 -0.23318 -0.0001836 0.31801 0.0002504 787.387894918315 792.392085989517 102.14 0.34744 102.14 102 102.35 0 73 26 5 0 0 0 0.0010604 2 57074 59.367 59.367 1 1.6927 1.4715 0 3488600 1451300 2037300 22444 42 8442 8633 35231;35232 35231 LLTTILHSDGDLTEQGK 17 1 0 Unmodified _LLTTILHSDGDLTEQGK_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.3271 3 614.326546 1839.95781 79853.93 0.43233 0.00026559 0.54763 0.00033642 0.97996 0.00060201 614.661048120036 617.332661277203 93.394 0.57404 93.394 93.17 93.744 0 139 36 7 0 0 0 0.0077348 1 52153 24.041 24.041 1 0.67486 0.55427 0 2409500 1440600 968930 22445 2069 8443 8634 35233 35233 LLTWVIGTGSPR 12 0 1 Unmodified _LLTWVIGTGSPR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3763 2 650.374612 1298.73467 NaN NaN NaN -0.82912 -0.00053924 NaN NaN NaN NaN 105.48 0.40275 105.48 105.39 105.79 0 0 0 0 0.03653 1 65347 45.158 15.415 1 NaN NaN 0 4829400 0 4829400 22446 1205 8444 8635 35234 35234 LLVACCLADIFR 12 0 1 Unmodified _LLVACCLADIFR_ 0 0 0 G1UI16;Q29RF7;H0Y9L9;Q9NTI5;B7Z5S1 G1UI16;Q9NTI5 G1UI16 PDS5A;PDS5B Sister chromatid cohesion protein PDS5 homolog A;Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.3835 2 725.88089 1449.74723 76709.16 1.0938 0.000794 0.097905 7.1068E-05 1.1918 0.00086507 726.382843738476 730.885579468336 126.55 0.3334 126.55 126.37 126.7 0 61 24 4 0 0 0 0.0029259 1 82312 57.348 43.142 1 0.96039 1.0371 0 2574100 1476400 1097800 22447 1270;2069 8445 8636 35235 35235 LLVACCLADIFR 12 0 1 Unmodified _LLVACCLADIFR_ 0 0 0 G1UI16;Q29RF7;H0Y9L9;Q9NTI5;B7Z5S1 G1UI16;Q9NTI5 G1UI16 PDS5A;PDS5B Sister chromatid cohesion protein PDS5 homolog A;Sister chromatid cohesion protein PDS5 homolog B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.3831 2 725.88089 1449.74723 NaN NaN NaN -0.19181 -0.00013923 NaN NaN NaN NaN 126.08 0.31594 126.08 125.93 126.24 -7.6294E-06 0 0 0 0.019414 1 84076 51.445 29.359 1 NaN NaN 0 2918600 2918600 0 22448 1270;2069 8445 8636 35236 35236 LLVAGSEDGGVQLFDISGR 19 0 1 Unmodified _LLVAGSEDGGVQLFDISGR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 967.0059 2 967.004904 1931.99526 60937.07 0.22369 0.00021631 -0.13674 -0.00013223 0.086949 8.408E-05 967.005284130555 972.00968376222 117.47 0.76137 117.47 117.2 117.96 0 369 50 10 0 0 0 1.9748E-12 2 75053 109.84 109.84 1 0.99876 1.1205 0 92066000 41509000 50558000 22449 1936 8446 8637 35237;35238 35237 LLVAGSEDGGVQLFDISGR 19 0 1 Unmodified _LLVAGSEDGGVQLFDISGR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 972.5114 2 967.004904 1931.99526 62242.96 0.4176 0.00040383 -0.25596 -0.00024751 0.16165 0.00015631 967.005125209036 972.510990616341 117.01 0.77851 117.01 116.75 117.53 0 274 45 9 0 0 0 1.1796E-12 2 76534 110.98 110.98 1 1.0001 1.1401 0 99723000 49685000 50038000 22450 1936 8446 8637 35239;35240 35239 LLVAGSEDGGVQLFDISGR 19 0 1 Unmodified _LLVAGSEDGGVQLFDISGR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 967.5071 2 967.004904 1931.99526 62140.84 0.19824 0.0001917 0.21878 0.00021156 0.41702 0.00040326 967.005338344113 972.009557681221 129.07 0.95737 129.07 128.76 129.72 0 223 44 7 0 0 0 3.2658E-12 2 77955 107.98 107.98 1 1.1892 1.0115 0 34760000 16047000 18714000 22451 1936 8446 8637 35241;35242 35242 LLVAGSEDGGVQLFDISGR 19 0 1 Unmodified _LLVAGSEDGGVQLFDISGR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 972.5112 2 967.004904 1931.99526 62193.71 0.37905 0.00036654 0.50763 0.00049088 0.88667 0.00085742 967.005521679772 972.510959626145 128.93 0.91125 128.93 128.45 129.36 0 203 37 10 0 0 0 1.1279E-17 2 76979 124.45 124.45 1 1.1907 1.0386 0 35799000 16347000 19452000 22452 1936 8446 8637 35243;35244 35244 LLVALGTLISDDSNAVQLAK 20 1 0 Unmodified _LLVALGTLISDDSNAVQLAK_ 0 0 0 Q9Y263 Q9Y263 Q9Y263 PLAA Phospholipase A-2-activating protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1025.0879 2 1021.08061 2040.14667 NaN NaN NaN 0.076552 7.8166E-05 NaN NaN NaN NaN 126.73 0.29422 126.73 126.59 126.88 0 0 0 0 0.018865 1 84588 34.685 28.965 1 NaN NaN 0 2689500 0 2689500 22453 2123 8447 8638 35245 35245 LLVATSVAAR 10 0 1 Unmodified _LLVATSVAAR_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.8112 2 500.811116 999.60768 85358.04 0.48936 0.00024508 -0.94343 -0.00047248 -0.45408 -0.00022741 500.810539425566 505.814684849363 59.026 0.31186 59.026 58.891 59.203 0 95 28 5 0 0 0 0.0052298 1 34298 60.436 35.514 1 1.2319 1.3454 0 38372000 19350000 19022000 22454 511 8448 8639 35246 35246 LLVATSVAAR 10 0 1 Unmodified _LLVATSVAAR_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.8116 2 500.811116 999.60768 NaN NaN NaN 0.14469 7.2463E-05 NaN NaN NaN NaN 69.498 0.35694 69.498 69.34 69.697 0 0 0 0 0.016394 1 36445 56.729 12.282 1 NaN NaN 0 1618400 1618400 0 22455 511 8448 8639 35247 35247 LLVATSVAAR 10 0 1 Unmodified _LLVATSVAAR_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.8109 2 500.811116 999.60768 90799.81 0.088892 4.4518E-05 0.29689 0.00014869 0.38579 0.00019321 500.811301138339 505.815288961675 69.901 0.41077 69.901 69.718 70.129 0 87 32 4 0 0 0 0.04172 1 35922 38.086 20.701 1 0.6188 0.55894 0 2106900 1232900 874010 22456 511 8448 8639 35248 35248 LLVDINK 7 1 0 Unmodified _LLVDINK_ 0 0 0 Q8NG31;H0YCZ2;H0YEY7 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.7629 2 407.755278 813.496004 94004.8 -0.079335 -3.2349E-05 -0.082648 -3.37E-05 -0.16198 -6.6049E-05 407.754901269805 411.762447836867 62.04 0.49122 62.04 61.908 62.399 0 141 41 7 0 0 0 0.018704 1 35568 95.793 57.001 1 1.0004 1.0129 0 27597000 13134000 14463000 22457 1928 8449 8640 35249 35249 LLVDVDESTLSPEEQK 16 1 0 Unmodified _LLVDVDESTLSPEEQK_ 0 0 0 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.4581 2 901.456921 1800.89929 NaN NaN NaN 0.18682 0.00016841 NaN NaN NaN NaN 91.795 0.56135 91.795 91.463 92.024 0 0 0 0 4.0088E-06 1 55644 80.469 63.443 1 NaN NaN 0 7511600 7511600 0 22458 1408 8450 8641 35250 35250 LLVDVDESTLSPEEQK 16 1 0 Unmodified _LLVDVDESTLSPEEQK_ 0 0 0 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 901.9575 2 901.456921 1800.89929 64667.99 0.18127 0.00016341 0.59629 0.00053753 0.77756 0.00070094 901.959260361188 905.965868390574 104.75 0.50336 104.75 104.52 105.02 0 103 27 6 0 0 0 0.0046479 2 58757 36.284 35.546 1 0.69581 0.56398 0 2730300 1742600 987690 22459 1408 8450 8641 35251;35252 35252 LLVEFAR 7 0 1 Unmodified _LLVEFAR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 429.259 2 424.255446 846.496338 93439.81 0.06838 2.9011E-05 -0.10017 -4.2497E-05 -0.031788 -1.3486E-05 424.255345006383 429.259331362128 77.486 0.96751 77.486 77.034 78.002 0 271 80 4 0 0 0 0.032902 1 46869 64.803 7.3398 1 0.90348 0.98857 0 33799000 17437000 16361000 22460 1933 8451 8642 35253 35253 LLVEFAR 7 0 1 Unmodified _LLVEFAR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 429.2596 2 424.255446 846.496338 NaN NaN NaN 0.058352 2.4756E-05 NaN NaN NaN NaN 89.031 0.94897 89.031 88.609 89.558 0 0 0 0 0.041109 1 48269 62.714 10.031 1 NaN NaN 0 2341700 0 2341700 22461 1933 8451 8642 35254 35254 LLVELIR 7 0 1 Unmodified _LLVELIR_ 0 0 0 P55201 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 428.2868 2 428.286746 854.558939 95314.91 0.17361 7.4355E-05 0.011343 4.858E-06 0.18495 7.9213E-05 428.286736698779 433.290793787411 98.097 0.84018 98.097 97.749 98.589 0 187 68 4 0 0 0 0.026166 1 59905 88.35 8.0561 1 0.96104 0.98262 0 14584000 7996900 6586800 22462 1616 8452 8643 35255 35255 LLVELIR 7 0 1 Unmodified _LLVELIR_ 0 0 0 P55201 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 428.2867 2 428.286746 854.558939 95699 0.25945 0.00011112 0.14017 6.0032E-05 0.39962 0.00017115 428.286708676836 433.290839496118 97.177 0.83704 97.177 96.763 97.6 -7.6294E-06 171 66 4 0 0 0 0.027041 1 60658 86.086 14.709 1 1.0188 1.0248 0 10966000 5783900 5181800 22463 1616 8452 8643 35256 35256 LLVGSEDYGR 10 0 1 Unmodified _LLVGSEDYGR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;Q14917 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.7886 2 554.785296 1107.55604 79320.12 0.48171 0.00026725 -0.5877 -0.00032605 -0.10599 -5.8802E-05 554.785062396835 559.789104547326 51.499 0.41138 51.499 51.278 51.689 0 107 31 5 0 0 0 0.00041053 2 29126 87.308 44.061 1 1.6317 1.6876 0 21690000 8497700 13192000 22464 523 8453 8644 35257;35258 35257 LLVGSEDYGR 10 0 1 Unmodified _LLVGSEDYGR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;Q14917 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.7891 2 554.785296 1107.55604 NaN NaN NaN -0.92151 -0.00051124 NaN NaN NaN NaN 60.317 0.31919 60.317 60.168 60.487 0 0 0 0 0.010843 1 30860 62.463 36.079 1 NaN NaN 0 1971300 0 1971300 22465 523 8453 8644 35259 35259 LLVLDPAQR 9 0 1 Unmodified _LLVLDPAQR_ 0 0 0 B5BU53;B2R9L6;A0A024R880;P50750 B5BU53 B5BU53 CDK9 Cyclin-dependent kinase 9 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.8156 2 512.811116 1023.60768 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.338 1 77.338 76.838 77.838 0 0 0 0 0.003213 1 46770 74.127 37.107 1 22466 243 8454 8645 35260 35260 LLVLESFLYK 10 1 0 Unmodified _LLVLESFLYK_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8729 2 612.865557 1223.71656 80760.3 0.57611 0.00035308 -0.24564 -0.00015055 0.33047 0.00020253 612.865404068616 616.872484044469 122.12 0.52461 122.12 121.88 122.41 -7.6294E-06 146 35 6 0 0 0 0.0010607 2 79006 76.827 76.827 1 0.99832 1.0124 0 5945400 2607600 3337900 22467 1781 8455 8646 35261;35262 35262 LLVLESFLYK 10 1 0 Unmodified _LLVLESFLYK_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.866 2 612.865557 1223.71656 78512.03 0.618 0.00037875 -0.020366 -1.2482E-05 0.59763 0.00036627 612.865408578085 616.872587760739 121.52 0.48146 121.52 121.31 121.79 7.6294E-06 153 35 6 0 0 0 0.00086964 3 80387 79.906 79.906 1 1.0242 1.034 0 8197700 3205200 4992500 22468 1781 8455 8646 35263;35264;35265 35263 LLVLESFLYK 10 1 0 Unmodified _LLVLESFLYK_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.8734 2 612.865557 1223.71656 78347.67 1.0622 0.00065097 -0.02425 -1.4862E-05 1.0379 0.00063611 612.865538715386 616.872612575458 134.31 0.27431 134.31 134.2 134.48 0 47 12 6 0 0 0 0.0025153 2 81942 68.735 68.735 1 1.3315 1.0558 0 4322200 1967300 2354900 22469 1781 8455 8646 35266;35267 35266 LLVLESFLYK 10 1 0 Unmodified _LLVLESFLYK_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.866 2 612.865557 1223.71656 80539.83 1.0677 0.00065438 -0.19434 -0.00011911 0.87339 0.00053527 612.865134322272 616.872349822203 134.15 0.29913 134.15 134 134.3 0 53 16 5 0 0 0 0.0088105 2 80927 55.567 55.567 1 1.406 1.1175 0 4036600 1584000 2452600 22470 1781 8455 8646 35268;35269 35269 LLVPTQFVGAIIGK 14 1 0 Unmodified _LLVPTQFVGAIIGK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.451 2 728.45032 1454.88609 71253.8 0.94968 0.0006918 0.01807 1.3163E-05 0.96775 0.00070496 728.45028026218 732.457336968705 130.21 0.85088 130.21 130.03 130.88 0 308 53 8 0 0 0 4.1329E-06 2 84821 100.48 0 1 1.6462 1.7207 0 30006000 12252000 17754000 22471 1364 8456 8647 35270;35271 35271 LLVPTQFVGAIIGK 14 1 0 Unmodified _LLVPTQFVGAIIGK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.4499 2 728.45032 1454.88609 NaN NaN NaN 0.37923 0.00027625 NaN NaN NaN NaN 129.18 0.12666 129.18 129.1 129.23 0 0 0 0 1.0695E-05 1 84229 117.7 0 1 NaN NaN 0 7289700 7289700 0 22472 1364 8456 8647 35272 35272 LLVPTQFVGAIIGK 14 1 0 Unmodified _LLVPTQFVGAIIGK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.4512 2 728.45032 1454.88609 71600.29 0.7258 0.00052871 0.063569 4.6307E-05 0.78936 0.00057501 728.450340527966 732.457342383301 129.77 0.92152 129.77 129.53 130.45 0 351 62 8 0 0 0 3.4472E-09 2 86611 112.75 0 1 1.7539 1.7908 0 31409000 11833000 19575000 22473 1364 8456 8647 35273;35274 35274 LLVPTQFVGAIIGK 14 1 0 Unmodified _LLVPTQFVGAIIGK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.3951 2 728.45032 1454.88609 77606.32 0.12414 9.043E-05 0.76309 0.00055587 0.88723 0.0006463 728.450378990062 732.457901138922 128.76 0.15512 128.76 128.67 128.82 0 45 14 5 0 0 0 0.00044149 1 86002 70.028 0 1 0.69595 0.70378 0 8845000 4796100 4049000 22474 1364 8456 8647 35275 35275 LLVPTQYVGAIIGK 14 1 0 Unmodified _LLVPTQYVGAIIGK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.9498 2 736.447777 1470.881 71527.65 0.92214 0.00067911 -0.15197 -0.00011192 0.77017 0.00056719 736.447682234947 740.454754947153 121.23 0.50639 121.23 121.02 121.53 0 180 32 7 0 0 0 0.00014549 2 78278 77.533 77.533 1 2.7179 2.8901 0 31712000 8300500 23411000 22475 2087 8457 8648 35276;35277 35277 LLVPTQYVGAIIGK 14 1 0 Unmodified _LLVPTQYVGAIIGK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.4559 2 736.447777 1470.881 72178.96 1.0778 0.00079373 0.08205 6.0425E-05 1.1598 0.00085415 736.447763060134 740.454886158495 120.77 0.53221 120.77 120.53 121.07 7.6294E-06 215 35 8 0 0 0 3.0789E-05 2 79763 96.015 96.015 1 2.6792 2.8644 0 36878000 10474000 26404000 22476 2087 8457 8648 35278;35279 35278 LLVPTQYVGAIIGK 14 1 0 Unmodified _LLVPTQYVGAIIGK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.4547 2 736.447777 1470.881 71798.84 0.98744 0.0007272 0.096587 7.1131E-05 1.084 0.00079833 736.447747813198 740.454846150563 133.97 0.39925 133.97 133.74 134.14 0 92 16 9 0 0 0 0.00078272 2 81579 58.37 58.37 1 1.8471 1.4774 0 7094400 2508300 4586200 22477 2087 8457 8648 35280;35281 35280 LLVPTQYVGAIIGK 14 1 0 Unmodified _LLVPTQYVGAIIGK_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.4548 2 736.447777 1470.881 71228.55 1.2237 0.00090118 -0.022624 -1.6662E-05 1.2011 0.00088452 736.447705413661 740.454773985926 133.7 0.48682 133.7 133.41 133.9 1.5259E-05 107 19 8 0 0 0 0.0020442 1 80487 49.5 49.5 1 2.0557 1.6774 0 7915800 2795200 5120600 22478 2087 8457 8648 35282 35282 LLVQTSVQAK 10 1 0 Unmodified _LLVQTSVQAK_ 0 0 0 P22670 P22670 P22670 RFX1 MHC class II regulatory factor RFX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.8301 2 543.829506 1085.64446 83403.24 0.63717 0.00034651 -0.17742 -9.6489E-05 0.45975 0.00025003 543.829233513195 547.836497990943 57.062 0.40061 57.062 56.86 57.261 3.8147E-06 85 25 5 0 0 0 0.036959 1 28158 40.002 23.225 1 1.0992 0.91007 0 1675200 717880 957350 22479 1509 8458 8649 35283 35283 LLVSASQDGK 10 1 0 Unmodified _LLVSASQDGK_ 0 0 0 C9JIS1;C9JXA5;Q6FHM2;P62879;C9JZN1;E7EP32;C9JD14;B1AKQ8;F6X3N5;F6UT28;F5H8J8;F5H100;F5H0S8;Q59G26;E9PCP0;F1T0G5;F1T0G4;B2R6K4;A8K3F6;A0A024R056;Q9HAV0;P62873;P16520 C9JIS1 C9JIS1 GNB2;GNB4;GNB1;GNB3 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.2905 2 509.282389 1016.55022 85831.13 0.79918 0.00040701 0.60461 0.00030792 1.4038 0.00071492 509.282740083446 513.289705922108 31.605 0.39301 31.605 31.343 31.736 -1.9073E-06 113 35 5 0 0 0 5.006E-06 2 15632 108.98 98.104 1 1.229 1.3531 0 42901000 20361000 22541000 22480 1135 8459 8650 35284;35285 35284 LLVSGSSDSTLK 12 1 0 Unmodified _LLVSGSSDSTLK_ 0 0 0 B4E074;Q9NVX2;A0A0A0MRH0;B4E303;K7EN33 B4E074 B4E074 NLE1 Notchless protein homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.8416 2 603.832443 1205.65033 79000.62 0.39962 0.00024131 0.18596 0.00011229 0.58558 0.0003536 603.83249804015 607.839669823979 52.186 0.5689 52.186 51.924 52.493 0 187 43 6 0 0 0 0.0071291 1 28874 48.741 48.741 1 1.5472 1.6028 0 29315000 12569000 16746000 22481 1060 8460 8651 35286 35286 LLVSGSSDSTLK 12 1 0 Unmodified _LLVSGSSDSTLK_ 0 0 0 B4E074;Q9NVX2;A0A0A0MRH0;B4E303;K7EN33 B4E074 B4E074 NLE1 Notchless protein homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.8415 2 603.832443 1205.65033 78192.2 0.50239 0.00030336 0.085235 5.1468E-05 0.58763 0.00035483 603.831803311376 607.840000670138 51.062 0.5318 51.062 50.769 51.301 0 123 42 4 0 0 0 0.00060196 2 28796 68.557 68.557 1 1.5437 1.5761 0 31404000 11867000 19537000 22482 1060 8460 8651 35287;35288 35287 LLVSGSSDSTLK 12 1 0 Unmodified _LLVSGSSDSTLK_ 0 0 0 B4E074;Q9NVX2;A0A0A0MRH0;B4E303;K7EN33 B4E074 B4E074 NLE1 Notchless protein homolog 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.8398 2 603.832443 1205.65033 79346.09 0.38908 0.00023494 0.10056 6.0723E-05 0.48964 0.00029566 603.832503264659 607.839772940164 59.994 0.49791 59.994 59.718 60.216 0 138 30 6 0 0 0 0.017123 1 30596 41.704 41.704 1 1.3957 1.0845 0 3609300 1494600 2114700 22483 1060 8460 8651 35289 35289 LLVTDMSDAEQYR 13 0 1 Oxidation (M) _LLVTDM(ox)SDAEQYR_ LLVTDM(1)SDAEQYR LLVTDM(69.67)SDAEQYR 0 1 0 O14929 O14929 O14929 HAT1 Histone acetyltransferase type B catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.8707 2 778.866688 1555.71882 NaN NaN NaN -0.10684 -8.3218E-05 NaN NaN NaN NaN 58.689 0.32311 58.689 58.481 58.804 0 0 0 0 0.00075534 1 33322 69.672 54.1 1 NaN NaN 0 2808900 0 2808900 22484 1368 8461 8652 35290 35290 1035 LLVTDMSDAEQYR 13 0 1 Oxidation (M) _LLVTDM(ox)SDAEQYR_ LLVTDM(1)SDAEQYR LLVTDM(61.34)SDAEQYR 0 1 0 O14929 O14929 O14929 HAT1 Histone acetyltransferase type B catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.8705 2 778.866688 1555.71882 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.732 1 57.732 57.232 58.232 0 0 0 0 0.0019204 1 33453 61.344 47.574 1 22485 1368 8461 8652 35291 35291 1035 LLVVTDPR 8 0 1 Unmodified _LLVVTDPR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.7822 2 456.779285 911.544017 87358.71 0.34021 0.0001554 -0.96483 -0.00044071 -0.62462 -0.00028531 456.779667888273 461.78263465191 59.734 1.0129 59.734 59.342 60.355 3.8147E-06 326 78 8 0 0 0 0.013109 1 34687 66.073 16.715 1 1.7926 2.0788 0 311050000 119970000 191090000 22486 119 8462 8653 35292 35292 LLVVTDPR 8 0 1 Unmodified _LLVVTDPR_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.7831 2 456.779285 911.544017 89191.44 0.049127 2.244E-05 -0.25882 -0.00011822 -0.20969 -9.5781E-05 456.779574685345 461.783019716953 69.941 0.60098 69.941 69.666 70.267 0 215 54 6 0 0 0 0.012693 1 36667 67.032 17.674 1 1.493 1.251 0 10148000 4155700 5992700 22487 119 8462 8653 35293 35293 LLVVYPWTQR 10 0 1 Unmodified _LLVVYPWTQR_ 0 0 0 CON__Q3SX09;CON__P02070;Q4TZM4;Q9BWU5;Q8IZI0;Q8IUL9;Q6V0K9;Q6J1Z7;Q670S4;Q52MT0;Q4F786;Q3LR79;Q0Z944;E9NGZ5;D1MGQ0;B3VL05;B2M1S8;Q9BWV6;Q9GZL9;Q9UK54;B3VL86;E9PFT6;D9YZU5;C8C504;A0N071;Q14473;P68871;P02042;Q9UM85;Q3L3Q5;D5FZW3;E9M263;Q9BXA2;Q9UBV6;Q14484;A9YUX2;A8MUF7;B5ANL9;Q9UP81;F8W6P5;Q14477;Q14476;E9PEW8;B7UCU6;B3VL31;Q14474;Q9UNL6;E9PBW4;E7CYP2;D9YZU9;D9YZU8;D9YZU7;D3GKD9;D3GKD8;Q14403;P69892;P69891;P02100 CON__Q3SX09 CON__Q3SX09 HBB;HBD;beta-globin;HBE1;HBG2;HBG1 Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta;Hemoglobin subunit gamma-2;Hemoglobin subunit gamma-1;Hemoglobin subunit epsilon ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.8679 2 637.866423 1273.71829 NaN NaN NaN 0.45439 0.00028984 NaN NaN NaN NaN 106.93 0.812 106.93 106.56 107.37 0 0 0 0 0.0038582 1 67969 74.92 56.14 1 NaN NaN 0 53143000 53143000 0 + 22488 1172 8463 8654 35294 35294 LLVVYPWTQR 10 0 1 Unmodified _LLVVYPWTQR_ 0 0 0 CON__Q3SX09;CON__P02070;Q4TZM4;Q9BWU5;Q8IZI0;Q8IUL9;Q6V0K9;Q6J1Z7;Q670S4;Q52MT0;Q4F786;Q3LR79;Q0Z944;E9NGZ5;D1MGQ0;B3VL05;B2M1S8;Q9BWV6;Q9GZL9;Q9UK54;B3VL86;E9PFT6;D9YZU5;C8C504;A0N071;Q14473;P68871;P02042;Q9UM85;Q3L3Q5;D5FZW3;E9M263;Q9BXA2;Q9UBV6;Q14484;A9YUX2;A8MUF7;B5ANL9;Q9UP81;F8W6P5;Q14477;Q14476;E9PEW8;B7UCU6;B3VL31;Q14474;Q9UNL6;E9PBW4;E7CYP2;D9YZU9;D9YZU8;D9YZU7;D3GKD9;D3GKD8;Q14403;P69892;P69891;P02100 CON__Q3SX09 CON__Q3SX09 HBB;HBD;beta-globin;HBE1;HBG2;HBG1 Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta;Hemoglobin subunit gamma-2;Hemoglobin subunit gamma-1;Hemoglobin subunit epsilon ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.8672 2 637.866423 1273.71829 NaN NaN NaN 0.56195 0.00035845 NaN NaN NaN NaN 118.7 0.6376 118.7 118.4 119.04 0 0 0 0 0.016555 1 70027 56.563 36.776 1 NaN NaN 0 9754800 9754800 0 + 22489 1172 8463 8654 35295 35295 LLVVYPWTQR 10 0 1 Unmodified _LLVVYPWTQR_ 0 0 0 CON__Q3SX09;CON__P02070;Q4TZM4;Q9BWU5;Q8IZI0;Q8IUL9;Q6V0K9;Q6J1Z7;Q670S4;Q52MT0;Q4F786;Q3LR79;Q0Z944;E9NGZ5;D1MGQ0;B3VL05;B2M1S8;Q9BWV6;Q9GZL9;Q9UK54;B3VL86;E9PFT6;D9YZU5;C8C504;A0N071;Q14473;P68871;P02042;Q9UM85;Q3L3Q5;D5FZW3;E9M263;Q9BXA2;Q9UBV6;Q14484;A9YUX2;A8MUF7;B5ANL9;Q9UP81;F8W6P5;Q14477;Q14476;E9PEW8;B7UCU6;B3VL31;Q14474;Q9UNL6;E9PBW4;E7CYP2;D9YZU9;D9YZU8;D9YZU7;D3GKD9;D3GKD8;Q14403;P69892;P69891;P02100 CON__Q3SX09 CON__Q3SX09 HBB;HBD;beta-globin;HBE1;HBG2;HBG1 Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta;Hemoglobin subunit gamma-2;Hemoglobin subunit gamma-1;Hemoglobin subunit epsilon ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.867 2 637.866423 1273.71829 NaN NaN NaN 0.5775 0.00036837 NaN NaN NaN NaN 118.47 0.72424 118.47 118.13 118.86 7.6294E-06 0 0 0 0.014509 1 68942 58.676 34.521 1 NaN NaN 0 7545000 7545000 0 + 22490 1172 8463 8654 35296 35296 LLWGLEGLPLTVSAVQGAHPVLR 23 0 1 Unmodified _LLWGLEGLPLTVSAVQGAHPVLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.1414 3 809.468793 2425.38455 68017.26 1.0979 0.00088873 -0.20708 -0.00016762 0.89084 0.00072111 809.802890824199 813.139112232892 130.67 1.2832 130.67 130.14 131.43 0 517 84 9 0 0 0 4.3652E-09 3 85001 65.954 65.954 1 0.90673 0.9232 0 30020000 15727000 14292000 22491 2038 8464 8655 35297;35298;35299 35298 LLWGLEGLPLTVSAVQGAHPVLR 23 0 1 Unmodified _LLWGLEGLPLTVSAVQGAHPVLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.8046 3 809.468793 2425.38455 67366.97 0.68691 0.00055603 0.0057847 4.6825E-06 0.69269 0.00056071 809.803199058131 813.139094451668 130.16 1.1606 130.16 129.57 130.73 0 561 77 10 0 0 0 1.603E-09 3 86734 73.405 73.405 1 0.89654 0.98518 0 40584000 20987000 19597000 22492 2038 8464 8655 35300;35301;35302 35302 LLWGLEGLPLTVSAVQGAHPVLR 23 0 1 Unmodified _LLWGLEGLPLTVSAVQGAHPVLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.8041 3 809.468793 2425.38455 65817.96 0.75821 0.00061375 0.085741 6.9405E-05 0.84395 0.00068315 809.803136463738 813.139283724386 134.7 0.35254 134.7 134.59 134.94 0 32 7 10 0 0 0 4.7058E-08 1 82397 52.09 52.09 1 1.6227 1.3972 0 57920000 23109000 34811000 22493 2038 8464 8655 35303 35303 LLWGLEGLPLTVSAVQGAHPVLR 23 0 1 Unmodified _LLWGLEGLPLTVSAVQGAHPVLR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 809.8039 3 809.468793 2425.38455 65935.04 0.85908 0.0006954 0.1117 9.0415E-05 0.97078 0.00078581 809.80313083425 813.139275348109 134.64 0.2012 134.64 134.56 134.76 1.5259E-05 32 4 11 0 0 0 4.0939E-06 1 81468 45.992 45.992 1 1.3276 1.1586 0 75365000 30926000 44440000 22494 2038 8464 8655 35304 35304 LLWHGSR 7 0 1 Unmodified _LLWHGSR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.7434 2 434.743037 867.471521 91101.23 -0.026903 -1.1696E-05 -0.72218 -0.00031396 -0.74908 -0.00032566 434.743080154564 439.74631559319 28.258 0.26774 28.258 28.13 28.397 1.9073E-06 47 12 7 0 0 0 0.028306 1 13478 72.138 72.138 1 0.90119 1.0166 0 46907000 23494000 23412000 22495 139 8465 8656 35305 35305 LLYDLADQLHAAVGASR 17 0 1 Unmodified _LLYDLADQLHAAVGASR_ 0 0 0 A0A0S2Z3L0;P13804;H0YL12;H0YK49;H0YNX6 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.6752 3 604.991609 1811.953 80938.79 0.68211 0.00041267 0.020055 1.2133E-05 0.70216 0.0004248 604.991670693346 608.327757724296 106.13 0.64767 106.13 105.81 106.45 0 197 48 6 0 0 0 0.00277 1 67326 47.223 47.223 1 4.9402 5.4074 0 33121000 4839400 28281000 22496 553 8466 8657 35306 35306 LLYNRPGTVSSLK 13 1 1 Unmodified _LLYNRPGTVSSLK_ 0 0 1 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.2872 3 483.280431 1446.81946 86381.05 0.07194 3.4767E-05 -0.056406 -2.726E-05 0.015534 7.5073E-06 483.280467471471 489.287778517144 50.57 1.0362 50.57 50.32 51.356 3.8147E-06 647 97 11 0 0 0 0.00094917 2 27797 55.314 42.436 1 0.57969 0.70951 0 1287500000 804390000 483080000 22497 1546;1018 8467 8658 35307;35308 35307 LLYNRPGTVSSLK 13 1 1 Unmodified _LLYNRPGTVSSLK_ 0 0 1 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.4167 2 724.417008 1446.81946 71600.38 0.58203 0.00042163 0.072119 5.2244E-05 0.65415 0.00047388 724.416995317377 733.428306787791 50.57 0.38606 50.57 50.364 50.75 0 186 29 8 0 0 0 0.00011213 2 27838 110.08 84.455 1 0.62884 0.76192 0 268120000 165060000 103060000 22498 1546;1018 8467 8658 35309;35310 35310 LLYNRPGTVSSLK 13 1 1 Unmodified _LLYNRPGTVSSLK_ 0 0 1 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.2878 3 483.280431 1446.81946 85466.27 0.24639 0.00011907 -0.28212 -0.00013635 -0.035739 -1.7272E-05 483.280468193447 489.287653233973 48.808 1.127 48.808 48.475 49.601 -3.8147E-06 555 92 11 0 0 0 5.8794E-05 3 27264 78.763 64.331 1 0.60807 0.72938 0 1665900000 1077100000 588770000 22499 1546;1018 8467 8658 35311;35312;35313 35311 LLYNRPGTVSSLK 13 1 1 Unmodified _LLYNRPGTVSSLK_ 0 0 1 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.9197 2 724.417008 1446.81946 71174.41 0.61521 0.00044567 0.13655 9.8922E-05 0.75176 0.00054459 724.417092271168 733.428318168671 48.808 0.56352 48.808 48.518 49.081 -3.8147E-06 249 44 9 0 0 0 2.6434E-23 1 27301 181.31 150.75 1 0.46005 0.54653 0 358510000 236730000 121780000 22500 1546;1018 8467 8658 35314 35314 LLYNRPGTVSSLK 13 1 1 Unmodified _LLYNRPGTVSSLK_ 0 0 1 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.2807 3 483.280431 1446.81946 84828.82 0.19648 9.4956E-05 -0.16033 -7.7485E-05 0.03615 1.7471E-05 483.2804424518 489.287795090785 58.27 2.4793 58.27 57.808 60.288 0 1018 185 11 0 0 0 0.0036188 3 29883 44.616 44.616 1 0.80903 0.72541 0 89342000 49460000 39882000 22501 1546;1018 8467 8658 35315;35316;35317 35317 LLYNRPGTVSSLK 13 1 1 Unmodified _LLYNRPGTVSSLK_ 0 0 1 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.4288 2 724.417008 1446.81946 70957.97 0.67368 0.00048802 -0.12979 -9.4022E-05 0.54389 0.000394 724.416847787913 733.428198923985 58.252 1.1846 58.252 57.82 59.004 3.8147E-06 483 91 8 0 0 0 0.0016839 1 29678 70.942 50.164 1 0.79492 0.68557 0 12676000 7044000 5631600 22502 1546;1018 8467 8658 35318 35318 LLYNRPGTVSSLK 13 1 1 Unmodified _LLYNRPGTVSSLK_ 0 0 1 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.2879 3 483.280431 1446.81946 85442.99 0.22938 0.00011086 -0.30153 -0.00014572 -0.072147 -3.4867E-05 483.280332586414 489.287744282521 58.555 2.3184 58.555 58.035 60.353 0 1042 178 10 0 0 0 0.011519 3 28946 34.685 26.96 1 0.80462 0.68698 0 73599000 40378000 33220000 22503 1546;1018 8467 8658 35319;35320;35321 35319 LLYNRPGTVSSLKK 14 2 1 Unmodified _LLYNRPGTVSSLKK_ 0 0 2 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.9786 3 525.978752 1574.91443 81813.09 0.26995 0.00014199 0.16006 8.4187E-05 0.43001 0.00022618 525.978724165871 534.65779488855 41.72 0.69461 41.72 41.511 42.206 0 272 54 8 0 0 0 0.046513 1 19410 18.457 15.748 1 0.82602 0.85572 0 8148400 3861400 4287000 22504 1546;1018 8468 8659 35322 35322 LLYNRPGTVSSLKK 14 2 1 Unmodified _LLYNRPGTVSSLKK_ 0 0 2 B4DNW3;P35659;B4DFG0;D6RDA2;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.9789 3 525.978752 1574.91443 81730.13 0.13059 6.8686E-05 0.37692 0.00019825 0.5075 0.00026694 526.312865804328 534.658023171829 41.438 0.59855 41.438 41.229 41.828 0 218 44 8 0 0 0 0.050595 1 18726 18.596 16.103 1 0.81726 0.79563 0 7164500 3519800 3644600 22505 1546;1018 8468 8659 35323 35323 LLYPPETGLFLVR 13 0 1 Unmodified _LLYPPETGLFLVR_ 0 0 0 B4DMZ0;Q53EL3;B5BU52;B2R6Q4;A8K3B6;P41240;H3BU69;H3BUM9 B4DMZ0 B4DMZ0 CSK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase CSK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.4441 2 759.439952 1516.86535 73630.74 1.0843 0.00082349 -0.13075 -9.9294E-05 0.9536 0.0007242 759.439937664016 764.443977728314 122.96 0.45432 122.96 122.67 123.12 -7.6294E-06 127 33 5 0 0 0 0.0030055 1 81611 51.445 51.445 1 1.9497 1.9538 0 11322000 3588200 7734200 22506 720 8469 8660 35324 35324 LLYSVQRPLHEFITAVQSR 19 0 2 Unmodified _LLYSVQRPLHEFITAVQSR_ 0 0 1 Q86XI2;B3KRQ2;B4DHE5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.3215 4 565.066748 2256.23789 78881.92 0.68965 0.0003897 -0.1739 -9.8264E-05 0.51575 0.00029143 565.31752929668 570.32142816064 116.69 0.58893 116.69 116.4 116.99 0 112 25 7 0 0 0 0.0011847 1 67598 32.565 32.565 1 3.0915 2.8793 0 31227000 12200000 19028000 22507 1887 8470 8661 35325 35325 LLYTFPGWK 9 1 0 Unmodified _LLYTFPGWK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.8177 2 562.810585 1123.60662 81315.55 1.0862 0.00061135 -0.14904 -8.3881E-05 0.9372 0.00052747 562.810444027363 566.817531161289 108.61 0.80338 108.61 108.17 108.97 0 268 56 7 0 0 0 0.0014644 2 67626 85.064 85.064 1 0.81366 0.89556 0 55002000 30339000 24663000 22508 486 8471 8662 35326;35327 35327 LLYTFPGWK 9 1 0 Unmodified _LLYTFPGWK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.8107 2 562.810585 1123.60662 81613.09 0.80644 0.00045387 -0.19241 -0.00010829 0.61403 0.00034558 562.810407211463 566.817470751351 107.78 0.80757 107.78 107.45 108.26 -7.6294E-06 293 58 7 0 0 0 0.0022292 2 68706 75.109 75.109 1 0.85911 0.91835 0 36860000 19286000 17574000 22509 486 8471 8662 35328;35329 35328 LLYTFPGWK 9 1 0 Unmodified _LLYTFPGWK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.8175 2 562.810585 1123.60662 NaN NaN NaN 0.25629 0.00014424 NaN NaN NaN NaN 119.56 0.72533 119.56 119.31 120.04 0 0 0 0 0.038893 1 70705 50.607 25.684 1 NaN NaN 0 4861200 0 4861200 22510 486 8471 8662 35330 35330 LLYTFPGWK 9 1 0 Unmodified _LLYTFPGWK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.8104 2 562.810585 1123.60662 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.47 1 119.47 118.97 119.97 -7.6294E-06 0 0 0 0.013169 1 70747 60.59 24.71 1 22511 486 8471 8662 35331 35331 LLYTFPGWK 9 1 0 Unmodified _LLYTFPGWK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.8109 2 562.810585 1123.60662 80620.3 0.61262 0.00034479 0.26457 0.0001489 0.87718 0.00049369 562.810650907134 566.817711216884 119.34 0.58873 119.34 119.09 119.68 -7.6294E-06 118 26 7 0 0 0 0.0067182 1 69682 63.48 63.48 1 1.1293 0.92808 0 9714900 4328300 5386600 22512 486 8471 8662 35332 35332 LLYVTPEK 8 1 0 Unmodified _LLYVTPEK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.7818 2 481.781493 961.548434 90324.48 0.0084162 4.0548E-06 0.91912 0.00044281 0.92753 0.00044687 481.781829088369 485.788899559165 58.653 0.41766 58.653 58.411 58.828 0 109 34 5 0 0 0 0.030566 1 33264 51.854 0 1 0.65639 0.66332 0 6914300 3893500 3020800 22513 873 8472 8663 35333 35333 LLYVTPEK 8 1 0 Unmodified _LLYVTPEK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.7809 2 481.781493 961.548434 88595.64 0.11847 5.7075E-05 -0.21231 -0.00010229 -0.093842 -4.5211E-05 481.781094109779 485.78858075891 53.597 0.73015 53.597 53.106 53.836 0 163 69 4 0 0 0 0.022432 1 30691 57.177 0 1 1.4694 1.4978 0 17070000 5735400 11335000 22514 873 8472 8663 35334 35334 LMAEDEEGYR 10 0 1 Oxidation (M) _LM(ox)AEDEEGYR_ LM(1)AEDEEGYR LM(65.31)AEDEEGYR 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;Q59FZ6;A5D6X0;P51531;A0A0U1RQZ9;F6VDE0;B4DK35 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.7645 2 614.76116 1227.50777 77711.95 0.33566 0.00020635 0.23051 0.00014171 0.56617 0.00034806 614.761134269313 619.765250744028 25.636 0.36 25.636 25.433 25.793 0 69 20 6 0 0 0 0.0015826 1 11227 65.305 41.877 1 0.64839 0.6479 0 8037200 3943300 4094000 22515 695;1595 8473 8664 35335 35335 537 LMAEDEEGYR 10 0 1 Oxidation (M) _LM(ox)AEDEEGYR_ LM(1)AEDEEGYR LM(66.27)AEDEEGYR 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;Q59FZ6;A5D6X0;P51531;A0A0U1RQZ9;F6VDE0;B4DK35 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.7656 2 614.76116 1227.50777 NaN NaN NaN 0.64676 0.0003976 NaN NaN NaN NaN 25.375 0.34569 25.375 25.219 25.565 1.9073E-06 0 0 0 0.0022289 1 11036 66.27 43.199 1 NaN NaN 0 3382200 0 3382200 22516 695;1595 8473 8664 35336 35336 537 LMAEDEEGYRK 11 1 1 Oxidation (M) _LM(ox)AEDEEGYRK_ LM(1)AEDEEGYRK LM(93.65)AEDEEGYRK 0 1 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;Q59FZ6;A5D6X0;P51531;A0A0U1RQZ9;F6VDE0;B4DK35 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.8083 2 678.808642 1355.60273 74793.74 0.57423 0.00038979 -0.34302 -0.00023285 0.2312 0.00015694 678.8080339925 687.81973120634 18.653 0.23061 18.653 18.53 18.76 1.9073E-06 33 12 4 0 0 0 0.00041641 2 5280 93.649 89.198 1 0.76143 0.8412 0 7001000 3822000 3179100 22517 695;1595 8474 8665 35337;35338 35337 537 LMAEDEEGYRK 11 1 1 Oxidation (M) _LM(ox)AEDEEGYRK_ LM(1)AEDEEGYRK LM(68.54)AEDEEGYRK 0 1 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;Q59FZ6;A5D6X0;P51531;A0A0U1RQZ9;F6VDE0;B4DK35 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.8741 3 452.874853 1355.60273 88249.55 0.17122 7.7542E-05 -1.0802 -0.00048922 -0.90902 -0.00041167 452.874040104671 458.881470309333 18.633 0.29563 18.633 18.51 18.806 0 48 17 5 0 0 0 0.00044638 1 5288 68.536 66.557 1 1.0879 1.2187 0 12300000 5645500 6654500 22518 695;1595 8474 8665 35339 35339 537 LMALYVASHYK 11 1 0 Oxidation (M) _LM(ox)ALYVASHYK_ LM(1)ALYVASHYK LM(44.3)ALYVASHYK 0 1 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.5674 3 437.897041 1310.66929 90351.42 0.063416 2.777E-05 -0.049471 -2.1663E-05 0.013945 6.1064E-06 437.897357214522 440.568039408747 56.431 1.1678 56.431 55.736 56.904 0 381 99 6 0 0 0 0.0049185 1 31584 44.299 44.299 1 1.3364 1.3304 0 26238000 9012900 17225000 22519 2023;1687 8475 8666 35340 35340 1503 LMALYVASHYK 11 1 0 Unmodified _LMALYVASHYK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 652.3525 2 648.344466 1294.67438 76030.82 0.64357 0.00041725 0.09885 6.4089E-05 0.74242 0.00048134 648.344616330731 652.35162251915 82.28 1.0105 82.28 81.921 82.932 -7.6294E-06 241 63 6 0 0 0 0.0019196 2 44671 63.816 63.816 1 1.5564 1.2088 0 3585000 1359800 2225200 22520 2023;1687 8475 8667 35341;35342 35341 LMALYVASHYK 11 1 0 Unmodified _LMALYVASHYK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.3515 2 648.344466 1294.67438 NaN NaN NaN -0.16283 -0.00010557 NaN NaN NaN NaN 82.147 1.2814 82.147 81.691 82.972 0 0 0 0 0.0022441 1 43723 76.465 71.5 1 NaN NaN 0 1505600 0 1505600 22521 2023;1687 8475 8667 35343 35343 LMATLR 6 0 1 Oxidation (M) _LM(ox)ATLR_ LM(1)ATLR LM(48.17)ATLR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.7113 2 360.707274 719.399995 NaN NaN NaN -0.2602 -9.3856E-05 NaN NaN NaN NaN 27.964 0.44805 27.964 27.857 28.305 1.9073E-06 0 0 0 0.037106 1 13095 48.174 16.06 1 NaN NaN 0 14588000 0 14588000 22522 81;1544 8476 8668 35344 35344 63 LMATMFQNLFPSINVHK 17 1 0 2 Oxidation (M) _LM(ox)ATM(ox)FQNLFPSINVHK_ LM(1)ATM(1)FQNLFPSINVHK LM(73.25)ATM(73.25)FQNLFPSINVHK 0 2 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.0154 3 675.009506 2022.00669 NaN NaN NaN -0.43379 -0.00029281 NaN NaN NaN NaN 109.25 0.66359 109.25 108.98 109.64 0 0 0 0 1.0724E-05 1 70092 73.252 67.672 1 NaN NaN 0 16327000 0 16327000 22523 493 8477 8669 35345 35345 339;340 LMDGEEPLPMLPSYK 15 1 0 2 Oxidation (M) _LM(ox)DGEEPLPM(ox)LPSYK_ LM(1)DGEEPLPM(1)LPSYK LM(89.36)DGEEPLPM(89.36)LPSYK 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.9169 2 876.415156 1750.81576 63134.21 1.0125 0.00088734 -0.19082 -0.00016723 0.82165 0.00072011 876.91688832724 880.422391065814 93.064 0.64674 93.064 92.659 93.306 -7.6294E-06 338 55 8 0 0 0 1.7714E-05 2 56235 89.356 83.658 1 1.4914 1.6816 0 112980000 38070000 74911000 22524 1471 8478 8670 35346;35347 35347 1202;1203 LMDGEEPLPMLPSYK 15 1 0 2 Oxidation (M) _LM(ox)DGEEPLPM(ox)LPSYK_ LM(1)DGEEPLPM(1)LPSYK LM(90.61)DGEEPLPM(90.61)LPSYK 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 876.4148 2 876.415156 1750.81576 63686.95 0.61785 0.00054149 -0.24636 -0.00021591 0.37149 0.00032558 876.415123342256 880.422349917739 92.392 0.66029 92.392 92.017 92.677 -7.6294E-06 397 55 10 0 0 0 1.5719E-05 2 57095 90.614 90.614 1 1.4481 1.6876 0 252720000 102540000 150180000 22525 1471 8478 8670 35348;35349 35349 1202;1203 LMDGEEPLPMLPSYK 15 1 0 2 Oxidation (M) _LM(ox)DGEEPLPM(ox)LPSYK_ LM(1)DGEEPLPM(1)LPSYK LM(42.98)DGEEPLPM(42.98)LPSYK 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 876.9166 2 876.415156 1750.81576 64347.8 0.6029 0.0005284 -0.67123 -0.00058828 -0.068324 -5.9881E-05 876.414522970004 880.923615436841 106.46 0.54156 106.46 106.1 106.65 0 178 28 9 0 0 0 0.0037268 2 60738 42.976 42.976 1 0.62381 0.50323 0 22500000 12783000 9717400 22526 1471 8478 8670 35350;35351 35350 1202;1203 LMDGEEPLPMLPSYK 15 1 0 2 Oxidation (M) _LM(ox)DGEEPLPM(ox)LPSYK_ LM(1)DGEEPLPM(1)LPSYK LM(40.11)DGEEPLPM(40.11)LPSYK 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 880.9233 2 876.415156 1750.81576 65558.73 0.87108 0.00076343 -0.16347 -0.00014327 0.7076 0.00062015 876.415446563936 880.923793876029 114.4 0.61879 114.4 114.14 114.76 0 88 26 6 0 0 0 0.0049298 1 66761 40.113 36.792 1 1.1055 0.86215 0 3765500 1890400 1875100 22527 1471 8478 8670 35352 35352 1202;1203 LMDGEEPLPMLPSYK 15 1 0 2 Oxidation (M) _LM(ox)DGEEPLPM(ox)LPSYK_ LM(1)DGEEPLPM(1)LPSYK LM(65.23)DGEEPLPM(65.23)LPSYK 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 876.4152 2 876.415156 1750.81576 63979.89 0.31767 0.00027841 -0.35676 -0.00031267 -0.039087 -3.4257E-05 876.414804411828 880.422818472482 106.7 0.60154 106.7 106.48 107.08 0 224 36 9 0 0 0 0.00026388 1 60274 65.234 65.234 1 0.61317 0.49251 0 15408000 9210400 6197300 22528 1471 8478 8670 35353 35353 1202;1203 LMDGEEPLPMLPSYK 15 1 0 Oxidation (M) _LMDGEEPLPM(ox)LPSYK_ LMDGEEPLPM(1)LPSYK LM(-80.59)DGEEPLPM(80.59)LPSYK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 868.9196 2 868.417699 1734.82084 NaN NaN NaN -0.85151 -0.00073946 NaN NaN NaN NaN 114.36 0.37699 114.36 114.12 114.49 0 0 0 0 1.0927E-05 1 66774 85.973 71.001 2 NaN NaN 0 4070100 4070100 0 22529 1471 8478 8671 35354 35354 1202;1203 LMDGEEPLPMLPSYK 15 1 0 Oxidation (M) _LM(ox)DGEEPLPMLPSYK_ LM(1)DGEEPLPMLPSYK LM(40.58)DGEEPLPM(-40.58)LPSYK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 872.9312 2 868.417699 1734.82084 NaN NaN NaN 2.7884 0.0024215 NaN NaN NaN NaN 115.29 0.25392 115.29 115.13 115.39 -7.6294E-06 0 0 0 0.0022337 1 66604 53.557 20.333 2 NaN NaN 0 2213900 0 2213900 22530 1471 8478 8671 35355 35355 1202;1203 LMEEIMSEK 9 1 0 2 Oxidation (M) _LM(ox)EEIM(ox)SEK_ LM(1)EEIM(1)SEK LM(59.15)EEIM(59.15)SEK 0 2 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QSF1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.2661 2 571.259407 1140.50426 80213.94 0.55627 0.00031778 -0.21595 -0.00012336 0.34032 0.00019441 571.258703468247 575.266488696016 24.923 0.5532 24.923 24.574 25.128 0 70 24 5 0 0 0 0.017015 1 10389 59.153 59.153 1 2.936 2.9323 0 15118000 3794900 11323000 22531 1009 8479 8672 35356 35356 796;797 LMEFLCNMDNK 11 1 0 2 Oxidation (M) _LM(ox)EFLCNM(ox)DNK_ LM(1)EFLCNM(1)DNK LM(43.77)EFLCNM(43.77)DNK 0 2 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8069 2 723.80673 1445.59891 72355.45 0.75951 0.00054974 -0.2371 -0.00017162 0.52241 0.00037812 723.806204814538 727.813790426176 53.419 0.60831 53.419 53.073 53.681 0 152 46 5 0 0 0 0.024425 1 29824 43.77 43.77 1 1.7675 1.7396 0 23996000 9140100 14856000 22532 2059 8480 8673 35357 35357 1889;1890 LMEFLCNMDNK 11 1 0 2 Oxidation (M) _LM(ox)EFLCNM(ox)DNK_ LM(1)EFLCNM(1)DNK LM(64.04)EFLCNM(64.04)DNK 0 2 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.8146 2 723.80673 1445.59891 72349.17 0.51888 0.00037557 -0.15221 -0.00011017 0.36667 0.0002654 723.806434440878 727.813869079654 53.983 0.73035 53.983 53.596 54.327 0 200 58 6 0 0 0 0.0022575 1 30215 64.04 61.188 1 1.5914 1.5695 0 24831000 10739000 14092000 22533 2059 8480 8673 35358 35358 1889;1890 LMEFLCNMDNK 11 1 0 2 Oxidation (M) _LM(ox)EFLCNM(ox)DNK_ LM(1)EFLCNM(1)DNK LM(63.18)EFLCNM(63.18)DNK 0 2 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.8077 2 723.80673 1445.59891 72622.59 0.73884 0.00053478 -0.25374 -0.00018366 0.48511 0.00035112 723.806705328346 727.814025366308 52.111 0.66599 52.111 51.852 52.518 0 230 50 7 0 0 0 0.002391 2 29701 63.184 61.54 1 1.4866 1.5851 0 20868000 8705000 12163000 22534 2059 8480 8673 35359;35360 35359 1889;1890 LMEFLCNMDNK 11 1 0 2 Oxidation (M) _LM(ox)EFLCNM(ox)DNK_ LM(1)EFLCNM(1)DNK LM(43.31)EFLCNM(43.31)DNK 0 2 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.8434 2 723.80673 1445.59891 72086.63 0.56748 0.00041075 -0.19127 -0.00013844 0.37621 0.0002723 723.806854937536 727.813787590945 52.717 0.67655 52.717 52.397 53.073 -3.8147E-06 239 53 7 0 0 0 0.016023 1 29883 43.308 41.264 1 1.5417 1.6202 0 19666000 7609500 12056000 22535 2059 8480 8673 35361 35361 1889;1890 LMELHGEGSSSGK 13 1 0 Oxidation (M) _LM(ox)ELHGEGSSSGK_ LM(1)ELHGEGSSSGK LM(181.68)ELHGEGSSSGK 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.3215 2 674.314091 1346.61363 73489.57 0.54627 0.00036836 -0.31944 -0.0002154 0.22683 0.00015295 674.31400030912 678.321050604957 17.506 0.60929 17.506 17.307 17.916 0 136 22 9 0 0 0 5.1508E-39 2 4596 181.68 122.72 1 1.3235 1.4836 0 65034000 30467000 34567000 22536 742 8481 8674 35362;35363 35363 578 LMELHGEGSSSGK 13 1 0 Oxidation (M) _LM(ox)ELHGEGSSSGK_ LM(1)ELHGEGSSSGK LM(92.15)ELHGEGSSSGK 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 449.8786 3 449.878486 1346.61363 87151.96 0.041167 1.852E-05 -0.21903 -9.8535E-05 -0.17786 -8.0015E-05 449.878546609386 452.549787523951 17.557 0.66814 17.557 17.307 17.975 0 163 25 10 0 0 0 2.6636E-05 2 4577 92.151 65.793 1 1.2595 1.4204 0 112110000 49671000 62442000 22537 742 8481 8674 35364;35365 35364 578 LMELHGEGSSSGK 13 1 0 Oxidation (M) _LM(ox)ELHGEGSSSGK_ LM(1)ELHGEGSSSGK LM(143.24)ELHGEGSSSGK 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.321 2 674.314091 1346.61363 72574.69 0.14963 0.0001009 -0.10178 -6.8635E-05 0.047844 3.2262E-05 674.314112111437 678.321126979947 17.392 0.5363 17.392 17.248 17.785 0 99 19 8 0 0 0 4.1273E-19 2 4348 143.24 116.12 1 1.3311 1.4611 0 41460000 18345000 23114000 22538 742 8481 8674 35366;35367 35367 578 LMELHGEGSSSGK 13 1 0 Oxidation (M) _LM(ox)ELHGEGSSSGK_ LM(1)ELHGEGSSSGK LM(74.48)ELHGEGSSSGK 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.8788 3 449.878486 1346.61363 89387.63 -0.34396 -0.00015474 -0.18185 -8.181E-05 -0.52581 -0.00023655 449.878548308877 452.549800870038 17.499 0.63956 17.499 17.248 17.888 0 143 23 10 0 0 0 2.9943E-05 2 4325 74.475 57.308 1 1.4519 1.633 0 71943000 27969000 43974000 22539 742 8481 8674 35368;35369 35369 578 LMELHGEGSSSGK 13 1 0 Unmodified _LMELHGEGSSSGK_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.3218 2 666.316634 1330.61871 73522.59 0.36765 0.00024497 0.04718 3.1437E-05 0.41483 0.00027641 666.31710083881 670.323159939923 24.429 0.21628 24.429 24.335 24.552 0 30 10 4 0 0 0 0.02825 1 10243 32.218 27.767 1 0.63704 0.65503 0 9528900 5378800 4150100 22540 742 8481 8675 35370 35370 LMELHGEGSSSGK 13 1 0 Unmodified _LMELHGEGSSSGK_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 447.2184 3 444.546848 1330.61871 87361.07 0.00010932 4.8597E-08 -0.0096326 -4.2822E-06 -0.0095233 -4.2336E-06 444.546810340962 447.21848398423 27.3 0.50748 27.3 27.078 27.585 0 139 23 8 0 0 0 0.05538 1 10529 17.629 14.204 1 1.0837 0.86536 0 9216500 4640100 4576400 22541 742 8481 8675 35371 35371 LMELHGEGSSSGK 13 1 0 Unmodified _LMELHGEGSSSGK_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;D6RAT0;H0Y9Y4;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.8244 2 666.316634 1330.61871 73431.58 0.2586 0.00017231 -0.10465 -6.9732E-05 0.15395 0.00010258 666.316852682089 670.323253473828 27.281 0.48073 27.281 27.068 27.549 0 99 19 7 0 0 0 0.0019549 2 9985 60.255 53.682 1 1.0538 0.8581 0 4574400 2530900 2043500 22542 742 8481 8675 35372;35373 35372 LMELYER 7 0 1 Oxidation (M) _LM(ox)ELYER_ LM(1)ELYER LM(55.68)ELYER 0 1 0 A0A090N7X1;A0A090N7Y2;Q9UG63;C9JHK9;C9JZV3 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2435 2 485.239135 968.463718 NaN NaN NaN 0.85249 0.00041366 NaN NaN NaN NaN 37.841 0.36147 37.841 37.718 38.08 0 0 0 0 0.017244 1 19753 55.676 43.771 1 NaN NaN 0 6769300 0 6769300 22543 455 8482 8676 35374 35374 322 LMFEELR 7 0 1 Oxidation (M) _LM(ox)FEELR_ LM(1)FEELR LM(44.45)FEELR 0 1 0 Q9Y3I0;B4DNA0;B4DNG5;B4DXF1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.2413 2 477.241678 952.468803 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.175 1 67.175 66.675 67.675 -7.6294E-06 0 0 0 0.054517 1 39762 44.447 27.061 1 22544 2137 8483 8677 35375 35375 1976 LMFSGLLVSSR 11 0 1 Unmodified _LMFSGLLVSSR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.3376 2 605.336641 1208.65873 81280.66 0.88532 0.00053592 0.4063 0.00024595 1.2916 0.00078187 605.336558895928 610.341634613515 111.33 0.50555 111.33 111.12 111.63 0 126 35 6 0 0 0 0.00041914 2 70091 79.974 79.974 1 1.2142 1.2207 0 9273500 4892900 4380600 22545 1995 8484 8678 35376;35377 35377 LMFSGLLVSSR 11 0 1 Unmodified _LMFSGLLVSSR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.342 2 605.336641 1208.65873 81437.34 0.54276 0.00032855 0.63294 0.00038314 1.1757 0.0007117 605.336560517196 610.34159791323 110.72 0.53043 110.72 110.44 110.97 0 125 40 5 0 0 0 0.0018568 4 71258 64.297 64.297 1 1.5753 1.5886 0 9405800 3567700 5838200 22546 1995 8484 8678 35378;35379;35380;35381 35378 LMFSGLLVSSR 11 0 1 Unmodified _LMFSGLLVSSR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.3365 2 605.336641 1208.65873 78156.27 0.81866 0.00049557 -0.060433 -3.6582E-05 0.75823 0.00045898 605.837986256543 610.340892516675 122.22 0.7332 122.22 121.99 122.72 0 131 36 5 0 0 0 0.030939 1 71927 59.426 59.426 1 1.8514 1.5011 0 10259000 3072800 7186300 22547 1995 8484 8678 35382 35382 LMFSGLLVSSR 11 0 1 Oxidation (M) _LM(ox)FSGLLVSSR_ LM(1)FSGLLVSSR LM(68.56)FSGLLVSSR 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.3383 2 613.334098 1224.65364 78063.37 0.84358 0.0005174 -0.30947 -0.00018981 0.53411 0.00032759 613.334175948396 618.338010534094 114.15 0.53023 114.15 114 114.53 0 96 22 6 0 0 0 0.00063004 1 66634 68.557 68.557 1 1.2842 1.1029 0 6370100 2752500 3617700 22548 1995 8484 8679 35383 35383 1827 LMFSGLLVSSR 11 0 1 Oxidation (M) _LM(ox)FSGLLVSSR_ LM(1)FSGLLVSSR LM(41.12)FSGLLVSSR 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.3343 2 613.334098 1224.65364 77168.54 0.58211 0.00035703 0.24529 0.00015044 0.8274 0.00050747 613.33459187495 618.338423173535 113.99 0.5383 113.99 113.79 114.33 0 105 22 6 0 0 0 0.012428 1 65657 41.117 36.334 1 1.1984 0.99874 0 6361900 2822100 3539800 22549 1995 8484 8679 35384 35384 1827 LMITHIVNQNFK 12 1 0 Oxidation (M) _LM(ox)ITHIVNQNFK_ LM(1)ITHIVNQNFK LM(83.65)ITHIVNQNFK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.9346 3 491.934266 1472.78097 85643.7 0.23209 0.00011417 0.2113 0.00010394 0.44338 0.00021812 491.934448818639 494.605684019128 71.143 1.3004 71.143 70.414 71.715 0 342 109 7 0 0 0 5.6778E-05 3 41628 83.652 64.047 1 1.0997 1.2463 0 92683000 45018000 47665000 22550 2070;1136 8485 8680 35385;35386;35387 35385 849 LMITHIVNQNFK 12 1 0 Oxidation (M) _LM(ox)ITHIVNQNFK_ LM(1)ITHIVNQNFK LM(48)ITHIVNQNFK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.9399 3 491.934266 1472.78097 NaN NaN NaN -0.10396 -5.1142E-05 NaN NaN NaN NaN 70.816 0.63181 70.816 70.446 71.078 0 0 0 0 0.034135 1 41119 48.004 35.237 1 NaN NaN 0 39238000 0 39238000 22551 2070;1136 8485 8680 35388 35388 849 LMITHIVNQNFK 12 1 0 Oxidation (M) _LM(ox)ITHIVNQNFK_ LM(1)ITHIVNQNFK LM(40.72)ITHIVNQNFK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.4077 2 737.397761 1472.78097 NaN NaN NaN 0.26392 0.00019461 NaN NaN NaN NaN 71.216 0.57544 71.216 70.903 71.478 0 0 0 0 0.018458 1 41509 40.724 28.147 1 NaN NaN 0 5121900 0 5121900 22552 2070;1136 8485 8680 35389 35389 849 LMITHIVNQNFK 12 1 0 Oxidation (M) _LM(ox)ITHIVNQNFK_ LM(1)ITHIVNQNFK LM(57)ITHIVNQNFK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.9348 3 491.934266 1472.78097 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.598 1 70.598 70.098 71.098 0 0 0 0 0.0019315 1 41093 57.003 42.224 1 22553 2070;1136 8485 8680 35390 35390 849 LMITHIVNQNFK 12 1 0 Oxidation (M) _LM(ox)ITHIVNQNFK_ LM(1)ITHIVNQNFK LM(81.92)ITHIVNQNFK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.6057 3 491.934266 1472.78097 85417.99 0.27469 0.00013513 0.20774 0.00010219 0.48243 0.00023732 491.93431157941 494.605784269212 68.832 0.54352 68.832 68.537 69.081 0 263 47 7 0 0 0 5.4616E-05 2 40804 81.92 62.862 1 1.0803 1.228 0 144390000 69152000 75236000 22554 2070;1136 8485 8680 35391;35392 35392 849 LMITHIVNQNFK 12 1 0 Oxidation (M) _LM(ox)ITHIVNQNFK_ LM(1)ITHIVNQNFK LM(59.57)ITHIVNQNFK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.6057 3 491.934266 1472.78097 85326.8 0.27067 0.00013315 -0.085152 -4.1889E-05 0.18551 9.1261E-05 491.93426349533 494.605589779633 69.241 0.74584 69.241 68.996 69.742 0 362 62 8 0 0 0 0.00052042 2 41100 59.57 45.217 1 1.1516 1.2873 0 102050000 47513000 54540000 22555 2070;1136 8485 8680 35393;35394 35393 849 LMITHIVNQNFK 12 1 0 Oxidation (M) _LM(ox)ITHIVNQNFK_ LM(1)ITHIVNQNFK LM(48.11)ITHIVNQNFK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.6055 3 491.934266 1472.78097 86744.34 0.084435 4.1537E-05 0.19781 9.7311E-05 0.28225 0.00013885 491.934374311893 494.605719696925 80.491 0.66027 80.491 80.199 80.859 0 215 43 8 0 0 0 0.0020314 1 43561 48.115 38.043 1 1.3189 1.0597 0 7858900 3147000 4711900 22556 2070;1136 8485 8680 35395 35395 849 LMITHIVNQNFK 12 1 0 Oxidation (M) _LM(ox)ITHIVNQNFK_ LM(1)ITHIVNQNFK LM(44.62)ITHIVNQNFK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.6061 3 491.934266 1472.78097 85994.27 0.18939 9.3168E-05 0.16693 8.2118E-05 0.35632 0.00017529 491.934317907024 494.605679412099 80.424 0.74017 80.424 80.016 80.757 0 214 47 8 0 0 0 0.0032902 1 42544 44.616 38.035 1 1.3011 1.0601 0 7502200 3121400 4380700 22557 2070;1136 8485 8680 35396 35396 849 LMITHIVNQNFK 12 1 0 Unmodified _LMITHIVNQNFK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.274 3 486.602628 1456.78605 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.895 1 89.895 89.395 90.395 7.6294E-06 0 0 0 0.044553 1 48940 53.967 33.126 1 22558 2070;1136 8485 8681 35397 35397 LMIWDTR 7 0 1 Oxidation (M) _LM(ox)IWDTR_ LM(1)IWDTR LM(64.76)IWDTR 0 1 0 Q09028;H0YF10;H0YCT5;H0YDK2;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP01;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.7457 2 475.741845 949.469137 87305.94 -0.072905 -3.4684E-05 0.62876 0.00029913 0.55586 0.00026444 475.742055820501 480.7461072062 69.996 1.139 69.996 69.415 70.554 0 402 100 5 0 0 0 0.015954 2 40575 64.757 51.086 1 0.8151 0.89669 0 54500000 29950000 24549000 22559 1771;1695 8486 8682 35398;35399 35398 1527 LMIWDTR 7 0 1 Oxidation (M) _LM(ox)IWDTR_ LM(1)IWDTR LM(46.02)IWDTR 0 1 0 Q09028;H0YF10;H0YCT5;H0YDK2;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP01;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.7419 2 475.741845 949.469137 86345.61 0.11164 5.3111E-05 0.69841 0.00033226 0.81005 0.00038537 475.742077725574 480.746113729256 68.795 1.1409 68.795 68.097 69.238 0 392 94 6 0 0 0 0.035477 2 40697 46.021 34.372 1 0.82481 0.9514 0 71738000 41439000 30299000 22560 1771;1695 8486 8682 35400;35401 35400 1527 LMIWDTR 7 0 1 Oxidation (M) _LM(ox)IWDTR_ LM(1)IWDTR LM(43.25)IWDTR 0 1 0 Q09028;H0YF10;H0YCT5;H0YDK2;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP01;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.7463 2 475.741845 949.469137 87604.13 0.12333 5.8671E-05 0.22977 0.00010931 0.3531 0.00016798 475.741942265299 480.745946105959 79.569 1.016 79.569 79.132 80.148 -7.6294E-06 245 61 5 0 0 0 0.039752 1 42794 43.246 31.878 1 1.2492 1.071 0 6165500 2905700 3259900 22561 1771;1695 8486 8682 35402 35402 1527 LMLFGSIFR 9 0 1 Oxidation (M) _LM(ox)LFGSIFR_ LM(1)LFGSIFR LM(55.53)LFGSIFR 0 1 0 Q6P158;Q59G60;H7C109 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.3068 2 550.30207 1098.58959 84766.84 0.59228 0.00032593 -0.03378 -1.8589E-05 0.5585 0.00030734 550.301939986545 555.306158056968 116.88 0.37459 116.88 116.64 117.02 0 49 22 4 0 0 0 0.0070717 1 76467 55.531 33.984 1 1.7502 1.896 0 2651200 1044100 1607100 22562 1850 8487 8683 35403 35403 1699 LMLLLEVISGER 12 0 1 Oxidation (M) _LM(ox)LLLEVISGER_ LM(1)LLLEVISGER LM(86.62)LLLEVISGER 0 1 0 A0A0S2Z3G9;O43707;B4DSX0;B4E337;Q86TX4;A0A024R694;P12814;G3V5M4;B3W6H4;B4DRP5;G3V2N5;B7Z4V1;B2R8Y4;B4DZQ2;P35609;A0A087WSZ2;Q08043 A0A0S2Z3G9;A0A087WSZ2 A0A0S2Z3G9 ACTN4;ACTN1;MLL-ACTN4;ACTN2;ACTN3 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.8992 2 694.89452 1387.77449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.07 1 122.07 121.57 122.57 0 0 0 0 7.9102E-05 1 80916 86.624 66.321 1 22563 548;401 8488 8684 35404 35404 290 LMMDPLSGQNR 11 0 1 2 Oxidation (M) _LM(ox)M(ox)DPLSGQNR_ LM(1)M(1)DPLSGQNR LM(59.07)M(59.07)DPLSGQNR 0 2 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3032 2 647.29993 1292.58531 78543.66 0.78483 0.00050802 -0.59551 -0.00038547 0.18932 0.00012255 647.800909053323 652.303517915337 33.874 0.28639 33.874 33.66 33.947 0 73 23 5 0 0 0 0.0046043 1 17088 59.067 53.771 1 1.8938 1.9136 0 9940700 3293500 6647200 22564 855 8489 8685 35405 35405 667;668 LMMDPLTGLNR 11 0 1 2 Oxidation (M) _LM(ox)M(ox)DPLTGLNR_ LM(1)M(1)DPLTGLNR LM(60.52)M(60.52)DPLTGLNR 0 2 0 Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8248 2 646.820498 1291.62644 NaN NaN NaN -0.14084 -9.1096E-05 NaN NaN NaN NaN 68.226 0.47826 68.226 68.113 68.592 0 0 0 0 0.001685 1 39595 60.518 45.878 1 NaN NaN 0 8248600 0 8248600 22565 864 8490 8686 35406 35406 677;678 LMMDPLTGLNR 11 0 1 2 Oxidation (M) _LM(ox)M(ox)DPLTGLNR_ LM(1)M(1)DPLTGLNR LM(68.56)M(68.56)DPLTGLNR 0 2 0 Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8246 2 646.820498 1291.62644 NaN NaN NaN 0.28618 0.0001851 NaN NaN NaN NaN 67.076 0.52332 67.076 66.852 67.375 0 0 0 0 0.00058029 1 39717 68.557 55.521 1 NaN NaN 0 8769200 0 8769200 22566 864 8490 8686 35407 35407 677;678 LMNDMTAVALNYGIYK 16 1 0 2 Oxidation (M) _LM(ox)NDM(ox)TAVALNYGIYK_ LM(1)NDM(1)TAVALNYGIYK LM(53.57)NDM(53.57)TAVALNYGIYK 0 2 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 928.9549 2 924.947155 1847.87976 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.602 1 89.602 89.102 90.102 0 0 0 0 0.0030159 1 54088 53.569 44.614 1 22567 390 8491 8687 35408 35408 282;283 LMNETTAVALAYGIYK 16 1 0 Oxidation (M) _LM(ox)NETTAVALAYGIYK_ LM(1)NETTAVALAYGIYK LM(89.4)NETTAVALAYGIYK 0 1 0 B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;B4DT47;B4DIZ3;B4DUS3;Q7KYN0 B3KNM0;O14992 B3KNM0 HSPA4L;HS24/p52;HSPA4;HEL-S-5a;HS24/P52 Heat shock 70 kDa protein 4L;Heat shock 70 kDa protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 891.4671 2 887.458213 1772.90187 NaN NaN NaN 0.20626 0.00018305 NaN NaN NaN NaN 104.59 0.51212 104.59 104.48 104.99 0 0 0 0 3.6682E-07 1 64766 89.403 75.498 1 NaN NaN 0 4264100 0 4264100 22568 624;404 8492 8688 35409 35409 294 LMQGDEICLR 10 0 1 Oxidation (M) _LM(ox)QGDEICLR_ LM(1)QGDEICLR LM(53.77)QGDEICLR 0 1 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8019 2 625.797023 1249.57949 NaN NaN NaN -0.5684 -0.0003557 NaN NaN NaN NaN 51.569 0.41481 51.569 51.399 51.814 0 0 0 0 0.0072367 1 29308 53.775 38.394 1 NaN NaN 0 4442200 0 4442200 22569 231 8493 8689 35410 35410 171 LMQLVDHR 8 0 1 Oxidation (M) _LM(ox)QLVDHR_ LM(1)QLVDHR LM(49.42)QLVDHR 0 1 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 346.5195 3 343.183293 1026.52805 103108 0.086823 2.9796E-05 0.21589 7.4088E-05 0.30271 0.00010388 343.183253569271 346.519385389729 22.692 0.35099 22.692 22.513 22.864 0 54 15 5 0 0 0 0.0087253 1 8631 49.418 36.381 1 1.6498 1.6624 0 10634000 4233200 6400300 22570 1801 8494 8690 35411 35411 1666 LMQQQQEVAGLSK 13 1 0 Oxidation (M) _LM(ox)QQQQEVAGLSK_ LM(1)QQQQEVAGLSK LM(70.49)QQQQEVAGLSK 0 1 0 A0A024R784;O15164;B4DYZ9;Q6ZSA6 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.386 2 738.379765 1474.74498 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.857 1 34.857 34.357 35.357 0 0 0 0 0.00077928 1 17489 70.488 44.929 1 22571 217 8495 8691 35412 35412 163 LMQQQQEVAGLSK 13 1 0 Oxidation (M) _LM(ox)QQQQEVAGLSK_ LM(1)QQQQEVAGLSK LM(113.63)QQQQEVAGLSK 0 1 0 A0A024R784;O15164;B4DYZ9;Q6ZSA6 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3794 2 738.379765 1474.74498 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.949 1 34.949 34.449 35.449 0 0 0 0 6.7854E-11 1 17528 113.63 86.514 1 22572 217 8495 8691 35413 35413 163 LMQQQQEVAGLSK 13 1 0 Oxidation (M) _LM(ox)QQQQEVAGLSK_ LM(1)QQQQEVAGLSK LM(124.1)QQQQEVAGLSK 0 1 0 A0A024R784;O15164;B4DYZ9;Q6ZSA6 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.8809 2 738.379765 1474.74498 79601.29 0.60737 0.00044847 -0.70201 -0.00051835 -0.094639 -6.9879E-05 738.380142245175 742.386393689454 34.131 0.28331 34.131 33.958 34.241 0 51 20 4 0 0 0 5.7378E-10 2 17217 124.1 109.9 1 1.6622 1.6778 0 8090200 3328700 4761500 22573 217 8495 8691 35414;35415 35415 163 LMVNPFAYEEYRK 13 1 1 Oxidation (M) _LM(ox)VNPFAYEEYRK_ LM(1)VNPFAYEEYRK LM(80.96)VNPFAYEEYRK 0 1 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.2839 3 559.276469 1674.80758 80777.32 0.83179 0.0004652 -0.40975 -0.00022916 0.42204 0.00023604 559.610516997811 565.283630486466 82.224 0.89955 82.224 81.678 82.577 0 351 77 6 0 0 0 4.6617E-05 1 48944 80.96 75.881 1 1.561 1.7931 0 26945000 9699300 17246000 22574 2000 8496 8692 35416 35416 1838 LMVNPFAYEEYRK 13 1 1 Unmodified _LMVNPFAYEEYRK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.9534 3 553.944831 1658.81266 84527.15 0.47154 0.00026121 0.090297 5.002E-05 0.56184 0.00031123 553.944709315042 559.952563970907 104.36 0.50356 104.36 104.11 104.61 0 119 31 6 0 0 0 0.055035 1 58530 15.162 15.162 1 1.6705 1.4364 0 1780900 680540 1100300 22575 2000 8496 8693 35417 35417 LNAFDQR 7 0 1 Unmodified _LNAFDQR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.2222 2 432.222134 862.429715 NaN NaN NaN 0.18876 8.1587E-05 NaN NaN NaN NaN 30.083 0.23712 30.083 29.991 30.229 -1.9073E-06 0 0 0 0.031947 2 14663 73.616 35.465 1 NaN NaN 0 14690000 14690000 0 22576 1412 8497 8694 35418;35419 35418 LNAFDQR 7 0 1 Unmodified _LNAFDQR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 432.2223 2 432.222134 862.429715 NaN NaN NaN 0.094313 4.0764E-05 NaN NaN NaN NaN 29.614 0.26891 29.614 29.479 29.748 0 0 0 0 0.032438 1 14310 76.134 33.088 1 NaN NaN 0 15939000 15939000 0 22577 1412 8497 8694 35420 35420 LNAFDQR 7 0 1 Unmodified _LNAFDQR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 432.222 2 432.222134 862.429715 93396.52 -0.18553 -8.0192E-05 0.30733 0.00013283 0.12179 5.2641E-05 432.22229370102 437.226257005224 33.832 0.25568 33.832 33.696 33.951 0 68 20 4 0 0 0 0.045193 1 14385 57.281 32.649 1 1.581 1.3185 0 6651500 2486600 4164900 22578 1412 8497 8694 35421 35421 LNALLHALNEVDPGDWQK 18 1 0 Unmodified _LNALLHALNEVDPGDWQK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3586 3 678.353206 2032.03779 75235.87 0.81561 0.00055327 0.399 0.00027066 1.2146 0.00082393 678.687715106778 681.358595496217 113 0.62161 113 112.63 113.25 0 105 45 4 0 0 0 0.0088216 1 71399 23.33 23.33 1 1.2696 1.2683 0 9739300 4385200 5354100 22579 1392 8498 8695 35422 35422 LNALLHALNEVDPGDWQK 18 1 0 Unmodified _LNALLHALNEVDPGDWQK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.6884 3 678.353206 2032.03779 75102.97 0.88531 0.00060055 -1.2269 -0.00083229 -0.34162 -0.00023174 678.687559966653 681.357609831419 123.05 0.47815 123.05 122.85 123.33 -7.6294E-06 99 22 8 0 0 0 0.044524 1 73461 14.614 14.614 1 1.7857 1.4134 0 4994300 1896800 3097600 22580 1392 8498 8695 35423 35423 LNALLHALNEVDPGDWQK 18 1 0 Unmodified _LNALLHALNEVDPGDWQK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.025 3 678.353206 2032.03779 74557.74 0.93429 0.00063378 -0.85311 -0.00057871 0.081174 5.5065E-05 678.353218939366 681.35845603148 122.81 0.48778 122.81 122.61 123.1 0 101 23 7 0 0 0 0.043235 1 72387 14.928 9.7188 1 1.4349 1.1251 0 3791800 1611400 2180500 22581 1392 8498 8695 35424 35424 LNATNIELATVQPGQNFHMFTK 22 1 0 Oxidation (M) _LNATNIELATVQPGQNFHM(ox)FTK_ LNATNIELATVQPGQNFHM(1)FTK LNATNIELATVQPGQNFHM(51.53)FTK 0 1 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.4238 3 830.753041 2489.23729 67119.52 1.1244 0.0009341 -0.068404 -5.6827E-05 1.056 0.00087727 831.087464305892 833.758849078261 96.488 0.7272 96.488 96.175 96.902 0 329 61 9 0 0 0 1.7363E-07 1 58685 51.526 51.526 1 2.5602 2.879 0 71002000 17770000 53232000 22582 595 8499 8696 35425 35425 455 LNDGNEYLFQAK 12 1 0 Unmodified _LNDGNEYLFQAK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3532 2 706.346249 1410.67794 77098.64 0.82157 0.00058031 -0.30081 -0.00021248 0.52075 0.00036783 706.847119857668 710.353396276407 70.596 0.59061 70.596 70.363 70.953 0 115 48 4 0 0 0 3.5535E-06 1 41169 111.06 111.06 1 2.1529 2.1167 0 8688400 3143800 5544600 22583 415 8500 8697 35426 35426 LNDGSQITYEK 11 1 0 Unmodified _LNDGSQITYEK_ 0 0 0 O95831;Q5RZA0;Q5RZ99 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.3183 2 634.311874 1266.6092 NaN NaN NaN 0.070017 4.4413E-05 NaN NaN NaN NaN 33.261 0.39295 33.261 33.123 33.516 0 0 0 0 0.053247 1 16694 43.308 31.261 1 NaN NaN 0 7974200 0 7974200 22584 1431 8501 8698 35427 35427 LNDGSQITYEK 11 1 0 Unmodified _LNDGSQITYEK_ 0 0 0 O95831;Q5RZA0;Q5RZ99 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3126 2 634.311874 1266.6092 74045.53 0.55027 0.00034904 -0.11669 -7.4021E-05 0.43358 0.00027502 634.311678595359 638.319209987461 32.739 0.49308 32.739 32.497 32.99 0 122 45 4 0 0 0 6.0402E-08 1 16321 115.78 91.751 1 1.5229 1.5565 0 17335000 6711600 10623000 22585 1431 8501 8698 35428 35428 LNDGSQITYEK 11 1 0 Unmodified _LNDGSQITYEK_ 0 0 0 O95831;Q5RZA0;Q5RZ99 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.3191 2 634.311874 1266.6092 76561.07 0.45129 0.00028626 0.12735 8.0782E-05 0.57865 0.00036704 634.312035635255 638.319019414863 38.497 0.44847 38.497 38.231 38.68 0 119 29 6 0 0 0 0.00048456 2 17401 74.841 61.071 1 1.5344 1.2113 0 4098600 1632100 2466600 22586 1431 8501 8698 35429;35430 35429 LNDGSQITYEK 11 1 0 Unmodified _LNDGSQITYEK_ 0 0 0 O95831;Q5RZA0;Q5RZ99 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.3185 2 634.311874 1266.6092 77002.86 0.3542 0.00022467 -0.75476 -0.00047875 -0.40056 -0.00025408 634.311250532218 638.318731492656 38.699 0.74903 38.699 38.246 38.995 -3.8147E-06 165 57 5 0 0 0 0.00048325 1 17079 74.944 54.641 1 1.7289 1.3558 0 3322900 1299100 2023800 22587 1431 8501 8698 35431 35431 LNDLEDALQQAK 12 1 0 Unmodified _LNDLEDALQQAK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3517 2 679.351531 1356.68851 NaN NaN NaN 0.02035 1.3825E-05 NaN NaN NaN NaN 79.074 2.3487 79.074 78.631 80.979 0 0 0 0 1.2347E-59 1 46681 187.99 160.88 1 NaN NaN 0 2010800000 2010800000 0 + 22588 1308;1309 8502 8699 35432 35432 LNDLEDALQQAK 12 1 0 Unmodified _LNDLEDALQQAK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3566 2 679.351531 1356.68851 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.185 1 90.185 89.685 90.685 0 0 0 0 4.2569E-07 1 54475 104.79 76.782 1 + 22589 1308;1309 8502 8699 35433 35433 LNDLEDALQQAK 12 1 0 Unmodified _LNDLEDALQQAK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.352 2 679.351531 1356.68851 NaN NaN NaN 0.16729 0.00011365 NaN NaN NaN NaN 78.008 1.5559 78.008 77.699 79.254 0 0 0 0 2.9483E-210 1 47131 284.47 228.22 1 NaN NaN 0 1344800000 1344800000 0 + 22590 1308;1309 8502 8699 35434 35434 LNDLEDALQQAK 12 1 0 Unmodified _LNDLEDALQQAK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.3526 2 679.351531 1356.68851 NaN NaN NaN 0.30231 0.00020538 NaN NaN NaN NaN 90.468 2.8592 90.468 89.923 92.782 0 0 0 0 5.0335E-61 2 50053 193.83 145.55 1 NaN NaN 0 296720000 296720000 0 + 22591 1308;1309 8502 8699 35435;35436 35435 LNDLEEALQQAK 12 1 0 Unmodified _LNDLEEALQQAK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.3597 2 686.359356 1370.70416 NaN NaN NaN -0.53213 -0.00036523 NaN NaN NaN NaN 83.194 0.70868 83.194 82.905 83.614 0 0 0 0 7.4919E-14 1 49670 129.16 93.932 1 NaN NaN 0 106250000 106250000 0 + 22592 1166 8503 8700 35437 35437 LNDLEEALQQAK 12 1 0 Unmodified _LNDLEEALQQAK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3589 2 686.359356 1370.70416 NaN NaN NaN -0.97483 -0.00066909 NaN NaN NaN NaN 82.184 0.66492 82.184 81.97 82.635 0 0 0 0 4.9902E-185 1 50208 276.58 217.57 1 NaN NaN 0 132020000 132020000 0 + 22593 1166 8503 8700 35438 35438 LNDLEEALQQAK 12 1 0 Unmodified _LNDLEEALQQAK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.3603 2 686.359356 1370.70416 NaN NaN NaN -0.26127 -0.00017932 NaN NaN NaN NaN 95.848 1.0991 95.848 95.456 96.555 0 0 0 0 8.524E-74 1 53595 205.13 169.52 1 NaN NaN 0 44764000 44764000 0 + 22594 1166 8503 8700 35439 35439 LNDTIQLLVR 10 0 1 Unmodified _LNDTIQLLVR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8541 2 592.853512 1183.69247 80130.11 0.82585 0.00048961 0.0057485 3.408E-06 0.8316 0.00049302 592.853533116801 597.857673221675 98.962 0.60417 98.962 98.602 99.206 0 173 48 6 0 0 0 8.6078E-12 2 60435 140.35 94.673 1 0.57433 0.59841 0 21647000 14415000 7232200 22595 406 8504 8701 35440;35441 35441 LNDTIQLLVR 10 0 1 Unmodified _LNDTIQLLVR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.8549 2 592.853512 1183.69247 81316.09 0.77992 0.00046238 0.036134 2.1422E-05 0.81605 0.0004838 592.853585302001 597.857728249303 98.135 0.67567 98.135 97.762 98.438 -7.6294E-06 194 59 5 0 0 0 1.6945E-09 2 61254 130.75 88.149 1 0.47075 0.47182 0 18179000 11831000 6348000 22596 406 8504 8701 35442;35443 35442 LNDYIFSFDK 10 1 0 Unmodified _LNDYIFSFDK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3162 2 631.308603 1260.60265 77195.09 0.56695 0.00035792 0.59447 0.00037529 1.1614 0.00073321 631.308973118631 635.316415452444 104.16 0.99872 104.16 103.69 104.69 0 229 82 4 0 0 0 0.0071795 2 64162 57.785 37.998 1 2.0605 2.1481 0 11705000 3745400 7960000 22597 1609 8505 8702 35444;35445 35445 LNDYIFSFDK 10 1 0 Unmodified _LNDYIFSFDK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3182 2 631.308603 1260.60265 NaN NaN NaN 0.82528 0.00052101 NaN NaN NaN NaN 103.38 0.84479 103.38 103 103.85 0 0 0 0 0.010049 3 65223 63.283 49.514 1 NaN NaN 0 13276000 0 13276000 22598 1609 8505 8702 35446;35447;35448 35447 LNDYIFSFDK 10 1 0 Unmodified _LNDYIFSFDK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3094 2 631.308603 1260.60265 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.46 1 103.46 102.96 103.96 0 0 0 0 1.7472E-05 1 65450 94.309 75.038 1 22599 1609 8505 8702 35449 35449 LNDYIFSFDK 10 1 0 Unmodified _LNDYIFSFDK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.8181 2 631.308603 1260.60265 76458.65 1.0465 0.00066067 0.78379 0.00049482 1.8303 0.0011555 631.810170226765 635.316309253172 115.77 0.59352 115.77 115.48 116.07 0 91 26 7 0 0 0 0.017466 1 67880 47.844 37.014 1 0.93933 0.73992 0 5677500 2820800 2856700 22600 1609 8505 8702 35450 35450 LNDYIFSFDK 10 1 0 Unmodified _LNDYIFSFDK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.3162 2 631.308603 1260.60265 77488.42 0.80202 0.00050632 -0.18241 -0.00011516 0.61961 0.00039116 631.308458069937 635.315788876801 115.61 0.47241 115.61 115.37 115.84 7.6294E-06 69 21 6 0 0 0 0.002984 2 66822 66.595 52.389 1 1.1108 0.86883 0 3386600 1487900 1898700 22601 1609 8505 8702 35451;35452 35451 LNEAQPSTIATSMR 14 0 1 Oxidation (M) _LNEAQPSTIATSM(ox)R_ LNEAQPSTIATSM(1)R LNEAQPSTIATSM(123.26)R 0 1 0 P56537;A0A0U1RQV5 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.8806 2 767.88013 1533.74571 67084.18 0.93112 0.00071498 0.15938 0.00012238 1.0905 0.00083737 767.880205622585 772.884037510949 38.835 0.80937 38.835 38.412 39.222 0 373 65 9 0 0 0 2.7363E-10 2 19940 123.26 105.82 1 1.0296 1.2129 0 238460000 112300000 126160000 22602 1619 8506 8703 35453;35454 35454 1406 LNEAQPSTIATSMR 14 0 1 Oxidation (M) _LNEAQPSTIATSM(ox)R_ LNEAQPSTIATSM(1)R LNEAQPSTIATSM(112.84)R 0 1 0 P56537;A0A0U1RQV5 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.8823 2 767.88013 1533.74571 67981.74 0.45623 0.00035033 0.016749 1.2861E-05 0.47298 0.00036319 767.880192853071 772.883939493108 37.858 0.73663 37.858 37.496 38.233 0 336 56 9 0 0 0 1.6573E-09 2 19650 112.84 92.541 1 1.0416 1.2063 0 283310000 131020000 152290000 22603 1619 8506 8703 35455;35456 35455 1406 LNEAQPSTIATSMR 14 0 1 Oxidation (M) _LNEAQPSTIATSM(ox)R_ LNEAQPSTIATSM(1)R LNEAQPSTIATSM(52.55)R 0 1 0 P56537;A0A0U1RQV5 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 767.8809 2 767.88013 1533.74571 68206.15 1.0262 0.00078796 -0.30726 -0.00023594 0.71889 0.00055202 767.879695025672 772.883528758229 44.977 1.0852 44.977 44.406 45.491 0 377 77 9 0 0 0 0.00077362 1 20840 52.555 37.289 1 0.86967 0.74043 0 19534000 10355000 9178900 22604 1619 8506 8703 35457 35457 1406 LNEAQPSTIATSMR 14 0 1 Unmodified _LNEAQPSTIATSMR_ 0 0 0 P56537;A0A0U1RQV5 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 759.8845 2 759.882672 1517.75079 70039.13 0.42569 0.00032348 0.023267 1.768E-05 0.44896 0.00034116 759.882621256234 764.887285040554 69.586 0.75641 69.586 69.117 69.874 0 252 59 6 0 0 0 0.020281 1 36319 33.87 30.446 1 1.2283 1.0526 0 6116000 2761900 3354000 22605 1619 8506 8704 35458 35458 LNEAQPSTIATSMR 14 0 1 Unmodified _LNEAQPSTIATSMR_ 0 0 0 P56537;A0A0U1RQV5 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.387 2 759.882672 1517.75079 70766.68 0.51175 0.00038887 -0.0374 -2.842E-05 0.47435 0.00036045 759.882768833454 764.886863793759 70.045 0.74554 70.045 69.678 70.423 0 243 61 5 0 0 0 0.0035331 1 35875 46.985 37.032 1 1.33 1.1057 0 6019600 2583900 3435700 22606 1619 8506 8704 35459 35459 LNEFMAGFYIITNK 14 1 0 Oxidation (M) _LNEFM(ox)AGFYIITNK_ LNEFM(1)AGFYIITNK LNEFM(105.17)AGFYIITNK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.9212 2 838.921266 1675.82798 67101.18 0.95762 0.00080337 -0.20165 -0.00016917 0.75598 0.00063421 838.921192981378 842.928283734718 113.39 0.77544 113.39 113.1 113.87 7.6294E-06 350 56 8 0 0 0 1.2332E-06 2 71894 105.17 105.17 1 1.5253 1.5997 0 30289000 12290000 17999000 22607 2070 8507 8705 35460;35461 35461 1903 LNEFMAGFYIITNK 14 1 0 Oxidation (M) _LNEFM(ox)AGFYIITNK_ LNEFM(1)AGFYIITNK LNEFM(88.19)AGFYIITNK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.9293 2 838.921266 1675.82798 66113.88 0.78104 0.00065523 0.011369 9.5378E-06 0.79241 0.00066477 838.920901354433 842.928168352453 112.68 1.0128 112.68 112.22 113.23 0 334 70 8 0 0 0 3.9792E-05 1 72948 88.187 88.187 1 1.3614 1.3743 0 26861000 11049000 15812000 22608 2070 8507 8705 35462 35462 1903 LNEFMAGFYIITNK 14 1 0 Oxidation (M) _LNEFM(ox)AGFYIITNK_ LNEFM(1)AGFYIITNK LNEFM(50.21)AGFYIITNK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 838.9216 2 838.921266 1675.82798 65988.78 0.67594 0.00056706 -0.53811 -0.00045143 0.13783 0.00011563 838.921627793285 843.429162108254 124.59 0.77525 124.59 124.31 125.09 7.6294E-06 195 34 9 0 0 0 0.00093284 1 74607 50.207 50.207 1 0.94324 0.74771 0 6382400 3599800 2782700 22609 2070 8507 8705 35463 35463 1903 LNEGVVEFASYGDLK 15 1 0 Unmodified _LNEGVVEFASYGDLK_ 0 0 0 A0A024R6D8;Q59EK7;Q13243;Q86U32 A0A024R6D8 A0A024R6D8 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.9198 2 820.911953 1639.80935 65759.2 0.92912 0.00076272 -1.2205 -0.0010019 -0.29138 -0.0002392 821.412725992843 825.420551579454 101.89 1.5025 101.89 101.09 102.59 0 492 119 8 0 0 0 4.346E-10 4 62527 113.99 98.61 1 0.57478 0.62767 0 50738000 30763000 19974000 22610 202 8508 8706 35464;35465;35466;35467 35465 LNEGVVEFASYGDLK 15 1 0 Unmodified _LNEGVVEFASYGDLK_ 0 0 0 A0A024R6D8;Q59EK7;Q13243;Q86U32 A0A024R6D8 A0A024R6D8 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.9138 2 820.911953 1639.80935 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.95 1 113.95 113.45 114.45 0 0 0 0 0.0014073 1 66482 77.527 67.573 1 22611 202 8508 8706 35468 35468 LNEGVVEFASYGDLK 15 1 0 Unmodified _LNEGVVEFASYGDLK_ 0 0 0 A0A024R6D8;Q59EK7;Q13243;Q86U32 A0A024R6D8 A0A024R6D8 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 824.9194 2 820.911953 1639.80935 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.04 1 114.04 113.54 114.54 -7.6294E-06 0 0 0 0.00072055 1 66551 78.486 59.861 1 22612 202 8508 8706 35469 35469 LNEGVVEFASYGDLK 15 1 0 Unmodified _LNEGVVEFASYGDLK_ 0 0 0 A0A024R6D8;Q59EK7;Q13243;Q86U32 A0A024R6D8 A0A024R6D8 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 824.9195 2 820.911953 1639.80935 NaN NaN NaN -0.26242 -0.00021542 NaN NaN NaN NaN 113.94 0.63946 113.94 113.63 114.27 0 0 0 0 0.032534 1 65493 40.113 25.141 1 NaN NaN 0 5241200 0 5241200 22613 202 8508 8706 35470 35470 LNEGVVEFASYGDLK 15 1 0 Unmodified _LNEGVVEFASYGDLK_ 0 0 0 A0A024R6D8;Q59EK7;Q13243;Q86U32 A0A024R6D8 A0A024R6D8 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.9129 2 820.911953 1639.80935 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.84 1 113.84 113.34 114.34 -7.6294E-06 0 0 0 0.025441 1 65482 54.524 41.171 1 22614 202 8508 8706 35471 35471 LNEIVGNEDTVSR 13 0 1 Unmodified _LNEIVGNEDTVSR_ 0 0 0 Q75MT5;B5BUD2;P35250;H7C5S7;H7C5P1;H7C5Q7;F8WC37;H7C5A0;H7C5G4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.366 2 723.36517 1444.71579 71507.42 0.93176 0.000674 -1.3116 -0.0009488 -0.37989 -0.0002748 723.364873078043 728.369703314301 49.777 0.54016 49.777 49.565 50.105 0 160 41 7 0 0 0 1.5142E-30 2 27485 172.17 161.42 1 1.1575 1.1842 0 32164000 13137000 19028000 22615 1079 8509 8707 35472;35473 35473 LNEIVGNEDTVSR 13 0 1 Unmodified _LNEIVGNEDTVSR_ 0 0 0 Q75MT5;B5BUD2;P35250;H7C5S7;H7C5P1;H7C5Q7;F8WC37;H7C5A0;H7C5G4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.3709 2 723.36517 1444.71579 68509.91 0.53751 0.00038882 -0.36689 -0.0002654 0.17062 0.00012342 723.365063965586 728.369391922858 48.873 0.62152 48.873 48.568 49.19 0 207 50 6 0 0 0 3.257E-05 1 27379 98.182 84.247 1 1.1663 1.2765 0 33184000 12423000 20761000 22616 1079 8509 8707 35474 35474 LNEIVGNEDTVSR 13 0 1 Unmodified _LNEIVGNEDTVSR_ 0 0 0 Q75MT5;B5BUD2;P35250;H7C5S7;H7C5P1;H7C5Q7;F8WC37;H7C5A0;H7C5G4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.3647 2 723.36517 1444.71579 70735.94 0.76099 0.00055048 -0.26855 -0.00019426 0.49244 0.00035621 723.364548886865 728.369541787163 57.83 0.6332 57.83 57.556 58.189 3.8147E-06 192 46 8 0 0 0 0.00018657 2 29355 71.153 71.153 1 1.0154 0.87118 0 6249400 3449900 2799500 22617 1079 8509 8707 35475;35476 35476 LNEIVGNEDTVSR 13 0 1 Unmodified _LNEIVGNEDTVSR_ 0 0 0 Q75MT5;B5BUD2;P35250;H7C5S7;H7C5P1;H7C5Q7;F8WC37;H7C5A0;H7C5G4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.3635 2 723.36517 1444.71579 70471.75 0.6069 0.00043901 -0.41732 -0.00030187 0.18958 0.00013714 723.363986239305 728.369672416819 58.356 0.51925 58.356 58.116 58.635 -3.8147E-06 173 38 7 0 0 0 0.00015017 1 29023 84.479 84.479 1 1.1603 0.96476 0 6042600 2823900 3218700 22618 1079 8509 8707 35477 35477 LNELLVK 7 1 0 Unmodified _LNELLVK_ 0 0 0 Q5CAQ4;I3L0K7;K0A7K7;Q9BV61;Q59EK6;Q53G55;Q53FS6;A0A140VJY2;Q12931;I3L253 Q5CAQ4 Q5CAQ4 TRAP1 Heat shock protein 75 kDa, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.7703 2 414.763104 827.511654 NaN NaN NaN -0.20087 -8.3313E-05 NaN NaN NaN NaN 56.134 0.45503 56.134 55.877 56.332 0 0 0 0 0.05008 1 32230 58.286 15.072 1 NaN NaN 0 3239400 0 3239400 22619 612 8510 8708 35478 35478 LNEQQSVLQR 10 0 1 Unmodified _LNEQQSVLQR_ 0 0 0 Q14683;G8JLG1;V9GY57 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8312 2 607.828026 1213.6415 78691.06 0.38444 0.00023367 -0.70898 -0.00043094 -0.32454 -0.00019726 607.827648598845 612.831790068255 34.453 0.57574 34.453 34.046 34.621 0 200 48 7 0 0 0 3.0008E-08 2 17188 119.86 87.929 1 0.69988 0.7251 0 20490000 11233000 9256500 22620 1739 8511 8709 35479;35480 35480 LNEQQSVLQR 10 0 1 Unmodified _LNEQQSVLQR_ 0 0 0 Q14683;G8JLG1;V9GY57 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8324 2 607.828026 1213.6415 77379.06 0.39107 0.0002377 -1.0967 -0.0006666 -0.70563 -0.0004289 607.827685892327 612.832681673169 33.649 0.7641 33.649 33.151 33.915 0 252 62 8 0 0 0 7.5414E-10 2 16881 134.77 100.59 1 0.94669 1.0468 0 42005000 19028000 22976000 22621 1739 8511 8709 35481;35482 35481 LNEQQSVLQR 10 0 1 Unmodified _LNEQQSVLQR_ 0 0 0 Q14683;G8JLG1;V9GY57 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.8281 2 607.828026 1213.6415 79161.16 0.22758 0.00013833 -0.15484 -9.4115E-05 0.072738 4.4212E-05 607.82797842473 612.832263886753 39.322 0.51166 39.322 39.084 39.596 0 179 40 7 0 0 0 1.5021E-05 2 17985 101.46 71.293 1 1.1636 0.98459 0 4944800 2220900 2723900 22622 1739 8511 8709 35483;35484 35484 LNEQQSVLQR 10 0 1 Unmodified _LNEQQSVLQR_ 0 0 0 Q14683;G8JLG1;V9GY57 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.8286 2 607.828026 1213.6415 76088.86 0.24191 0.00014704 -0.84243 -0.00051205 -0.60052 -0.00036501 607.828031954774 612.832254170785 39.552 0.76456 39.552 39.219 39.984 0 223 58 7 0 0 0 6.0976E-08 2 17614 113.62 71.513 1 1.3553 1.1526 0 4600900 1971700 2629100 22623 1739 8511 8709 35485;35486 35486 LNEQVTQEQPLK 12 1 0 Unmodified _LNEQVTQEQPLK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.882 2 713.880456 1425.74636 72609.14 0.55786 0.00039825 -0.08113 -5.7917E-05 0.47673 0.00034033 713.88036234884 717.887504264265 46.075 0.59554 46.075 45.834 46.43 -3.8147E-06 316 53 8 0 0 0 1.5542E-48 2 24761 198.72 198.72 1 1.2009 1.3526 0 123890000 61267000 62625000 22624 1741 8512 8710 35487;35488 35488 LNEQVTQEQPLK 12 1 0 Unmodified _LNEQVTQEQPLK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.8876 2 713.880456 1425.74636 72866.37 0.54719 0.00039063 -0.00068316 -4.8769E-07 0.54651 0.00039014 713.880467483553 717.887452513152 45.05 0.48664 45.05 44.823 45.31 0 249 41 8 0 0 0 3.6003E-29 4 24594 165.18 165.18 1 1.1142 1.2598 0 131890000 61820000 70066000 22625 1741 8512 8710 35489;35490;35491;35492 35490 LNEQVTQEQPLK 12 1 0 Unmodified _LNEQVTQEQPLK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.8867 2 713.880456 1425.74636 73369.46 0.67538 0.00048214 -0.18057 -0.00012891 0.49481 0.00035323 713.880219467355 717.887464223624 53.509 0.63489 53.509 53.255 53.89 -3.8147E-06 242 45 8 0 0 0 0.00019799 2 26485 90.05 74.907 1 1.4356 1.1269 0 16956000 7229700 9726000 22626 1741 8512 8710 35493;35494 35493 LNEQVTQEQPLK 12 1 0 Unmodified _LNEQVTQEQPLK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.881 2 713.880456 1425.74636 72332.38 0.49974 0.00035675 0.077024 5.4986E-05 0.57676 0.00041174 713.88050448421 717.887552463181 54.042 0.6454 54.042 53.737 54.383 0 278 46 8 0 0 0 0.00019799 2 26342 90.05 86.033 1 1.349 1.1078 0 12329000 5170500 7158000 22627 1741 8512 8710 35495;35496 35496 LNESTFDTQITK 12 1 0 Unmodified _LNESTFDTQITK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.8531 2 698.851364 1395.68817 72029.16 0.57645 0.00040285 -0.454 -0.00031728 0.12245 8.5573E-05 698.851307550585 702.858258911759 63 0.73947 63 62.68 63.419 -3.8147E-06 364 71 6 0 0 0 1.5026E-12 2 36058 128.01 101.9 1 0.64403 0.72829 0 85260000 50375000 34885000 22628 1665 8513 8711 35497;35498 35498 LNESTFDTQITK 12 1 0 Unmodified _LNESTFDTQITK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.8588 2 698.851364 1395.68817 NaN NaN NaN -0.97083 -0.00067847 NaN NaN NaN NaN 62.032 0.81218 62.032 61.604 62.416 -3.8147E-06 0 0 0 3.3524E-08 1 36229 108.7 88.367 1 NaN NaN 0 32761000 0 32761000 22629 1665 8513 8711 35499 35499 LNESTFDTQITK 12 1 0 Unmodified _LNESTFDTQITK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.8588 2 698.851364 1395.68817 71711.41 0.54168 0.00037855 0.32783 0.00022911 0.86951 0.00060766 698.851437731588 702.858368297926 73.132 0.94859 73.132 72.725 73.674 0 343 66 10 0 0 0 0.004055 1 38559 54.471 47.498 1 0.32483 0.26124 0 21791000 16455000 5336700 22630 1665 8513 8711 35500 35500 LNESTFDTQITK 12 1 0 Unmodified _LNESTFDTQITK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.8586 2 698.851364 1395.68817 72490.61 0.50594 0.00035358 0.25033 0.00017494 0.75627 0.00052852 698.851552284076 702.85835889911 73.621 0.89832 73.621 73.284 74.182 0 317 62 8 0 0 0 0.00047162 2 38133 70.488 64.256 1 0.35074 0.28094 0 20275000 14177000 6098000 22631 1665 8513 8711 35501;35502 35502 LNEVYEAVK 9 1 0 Unmodified _LNEVYEAVK_ 0 0 0 Q86U86;E7EVG2;H0Y5B5;Q6IRX1 Q86U86 Q86U86 PBRM1 Protein polybromo-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.7845 2 532.784764 1063.55498 NaN NaN NaN 0.66687 0.0003553 NaN NaN NaN NaN 47.778 0.31388 47.778 47.56 47.874 0 0 0 0 0.0013293 1 25944 86.744 52.431 1 NaN NaN 0 7391900 7391900 0 22632 1883 8514 8712 35503 35503 LNEVYEAVK 9 1 0 Unmodified _LNEVYEAVK_ 0 0 0 Q86U86;E7EVG2;H0Y5B5;Q6IRX1 Q86U86 Q86U86 PBRM1 Protein polybromo-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.7841 2 532.784764 1063.55498 NaN NaN NaN 0.027541 1.4674E-05 NaN NaN NaN NaN 46.605 0.4425 46.605 46.382 46.824 0 0 0 0 0.010197 2 25711 66.568 37.65 1 NaN NaN 0 12565000 12565000 0 22633 1883 8514 8712 35504;35505 35504 LNFEAAWDEVGDEFEK 16 1 0 Unmodified _LNFEAAWDEVGDEFEK_ 0 0 0 Q9Y678;B3KW21;Q8WUI6;H0Y8X7 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 950.0146 2 949.925788 1897.83702 65506.03 1.0241 0.00097278 0.64664 0.00061426 1.6707 0.001587 949.926556575874 954.433737948322 121.44 0.34357 121.44 121.25 121.6 0 96 25 6 0 0 0 0.03675 1 80385 36.284 36.284 1 1.8176 1.8363 0 8485500 3805500 4680000 22634 2151 8515 8713 35506 35506 LNFENTFLR 9 0 1 Unmodified _LNFENTFLR_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.3038 2 577.303655 1152.59276 80019.34 0.73339 0.00042339 0.021629 1.2486E-05 0.75502 0.00043587 577.303617633452 582.307888456512 98.152 0.81117 98.152 97.825 98.636 7.6294E-06 217 66 5 0 0 0 0.001935 1 60102 91.069 54.227 1 0.87723 0.90849 0 20441000 12990000 7451200 22635 1795 8516 8714 35507 35507 LNFENTFLR 9 0 1 Unmodified _LNFENTFLR_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.3082 2 577.303655 1152.59276 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.4 1 98.4 97.9 98.9 0 0 0 0 0.011365 1 60150 62.338 30.577 1 22636 1795 8516 8714 35508 35508 LNFENTFLR 9 0 1 Unmodified _LNFENTFLR_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3036 2 577.303655 1152.59276 81019.47 0.82241 0.00047478 -0.10606 -6.1226E-05 0.71636 0.00041355 577.30357421397 582.307534750847 97.466 0.85567 97.466 96.968 97.824 0 271 66 6 0 0 0 0.00071971 3 60894 102.46 61.44 1 0.9627 1.0444 0 27919000 14496000 13423000 22637 1795 8516 8714 35509;35510;35511 35510 LNFENTFLR 9 0 1 Unmodified _LNFENTFLR_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.3073 2 577.303655 1152.59276 80615.61 0.74767 0.00043164 0.26372 0.00015225 1.0114 0.00058388 577.303829003793 582.307837081975 111.15 0.67768 111.15 110.84 111.52 0 114 30 7 0 0 0 0.0019674 2 64266 83.313 49.224 1 1.7406 1.4882 0 5861300 2310400 3550900 22638 1795 8516 8714 35512;35513 35512 LNFENTFLR 9 0 1 Unmodified _LNFENTFLR_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.3077 2 577.303655 1152.59276 79956.3 0.55667 0.00032137 0.18355 0.00010597 0.74022 0.00042733 577.303717986451 582.307758793123 111 0.60127 111 110.74 111.34 7.6294E-06 129 29 6 0 0 0 0.050843 2 63185 44.753 25.775 1 1.905 1.5805 0 5112600 1670500 3442100 22639 1795 8516 8714 35514;35515 35514 LNGFQLENFTLK 12 1 0 Unmodified _LNGFQLENFTLK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.3906 2 712.382634 1422.75072 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.6 1 111.6 111.1 112.1 0 0 0 0 0.00083818 1 70295 75.294 49.908 1 22640 1364 8517 8715 35516 35516 LNGFQLENFTLK 12 1 0 Unmodified _LNGFQLENFTLK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.3955 2 712.382634 1422.75072 NaN NaN NaN 0.88721 0.00063203 NaN NaN NaN NaN 110.68 0.54884 110.68 110.54 111.09 0 0 0 0 0.018103 1 71271 51.927 33.615 1 NaN NaN 0 5246900 0 5246900 22641 1364 8517 8715 35517 35517 LNGLNEEIAR 10 0 1 Unmodified _LNGLNEEIAR_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8041 2 564.80402 1127.59349 NaN NaN NaN 0.080874 4.5678E-05 NaN NaN NaN NaN 53.172 0.43525 53.172 52.926 53.361 0 0 0 0 0.0017583 1 29671 84.213 51.4 1 NaN NaN 0 4432600 4432600 0 22642 696 8518 8716 35518 35518 LNGLNEEIAR 10 0 1 Unmodified _LNGLNEEIAR_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8022 2 564.80402 1127.59349 80296.3 0.45317 0.00025595 0.16932 9.5634E-05 0.62249 0.00035159 564.80350748825 569.807738826025 51.806 0.43816 51.806 51.659 52.098 0 108 35 4 0 0 0 0.0010535 2 29416 76.943 44.588 1 1.0309 1.0338 0 18982000 8766800 10215000 22643 696 8518 8716 35519;35520 35520 LNGNLRPHGDNR 12 0 2 Unmodified _LNGNLRPHGDNR_ 0 0 1 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.9042 3 454.904358 1361.69124 89611.41 -0.31373 -0.00014272 0.039708 1.8063E-05 -0.27403 -0.00012466 454.904352939356 461.576693542963 16.123 0.30442 16.123 15.982 16.287 0 47 19 5 0 0 0 0.012723 1 3408 36.32 36.32 1 0.69535 0.67915 0 2004700 1246700 758000 22644 591 8519 8717 35521 35521 LNHLLK 6 1 0 Unmodified _LNHLLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 369.2371 2 369.237056 736.459559 98714.58 0.17784 6.5663E-05 -0.015803 -5.8351E-06 0.16203 5.9828E-05 369.236969386634 373.24397771891 23.029 0.40509 23.029 22.845 23.25 0 92 20 8 0 0 0 0.041831 1 8983 106.29 0 1 0.97007 1.0776 0 59889000 30077000 29812000 22645 1887 8520 8718 35522 35522 LNHLSSSEDGCSTEITCETFNDFVR 25 0 1 Unmodified _LNHLSSSEDGCSTEITCETFNDFVR_ 0 0 0 Q9UDM8;A4D0P7;O43913;A8K8C0 Q9UDM8 Q9UDM8 ORC5L;ORC5 Origin recognition complex subunit 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 977.0937 3 973.42376 2917.24945 63183.25 0.16601 0.0001616 0.26512 0.00025808 0.43114 0.00041968 973.75791713906 976.760276412143 109.07 0.28456 109.07 108.94 109.23 0 70 14 8 0 0 0 0.057238 1 62778 8.8496 6.7391 1 1.1958 0.99993 0 3765000 1457500 2307500 22646 657 8521 8719 35523 35523 LNHLSSSEDGCSTEITCETFNDFVR 25 0 1 Unmodified _LNHLSSSEDGCSTEITCETFNDFVR_ 0 0 0 Q9UDM8;A4D0P7;O43913;A8K8C0 Q9UDM8 Q9UDM8 ORC5L;ORC5 Origin recognition complex subunit 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 973.7603 3 973.42376 2917.24945 62123.91 0.19087 0.0001858 -0.16402 -0.00015966 0.026859 2.6145E-05 974.092632432739 977.094033765784 109.01 0.29652 109.01 108.85 109.15 0 78 13 8 0 0 0 0.037147 1 61810 12.939 12.491 1 1.4124 1.2002 0 2975300 1380100 1595200 22647 657 8521 8719 35524 35524 LNIDSIIQR 9 0 1 Unmodified _LNIDSIIQR_ 0 0 0 A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 A0A024RBP2 A0A024RBP2 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.3122 2 536.31148 1070.60841 82565.05 0.63342 0.00033971 0.027593 1.4799E-05 0.66101 0.00035451 536.311487390846 541.315455746697 92.393 1.0163 92.393 91.959 92.975 0 509 96 8 0 0 0 1.5121E-17 4 55973 170.05 70.29 1 1.9956 2.3105 0 166690000 51079000 115610000 22648 343 8522 8720 35525;35526;35527;35528 35526 LNIDSIIQR 9 0 1 Unmodified _LNIDSIIQR_ 0 0 0 A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 A0A024RBP2 A0A024RBP2 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.3138 2 536.31148 1070.60841 82713.6 0.72236 0.00038741 0.18278 9.8025E-05 0.90514 0.00048544 536.311468833855 541.315610381932 91.545 1.0665 91.545 91.181 92.247 -7.6294E-06 416 93 8 0 0 0 4.0269E-34 3 56637 190.26 94.446 1 1.9577 2.2718 0 329660000 100350000 229320000 22649 343 8522 8720 35529;35530;35531 35530 LNIDSIIQR 9 0 1 Unmodified _LNIDSIIQR_ 0 0 0 A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 A0A024RBP2 A0A024RBP2 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.3115 2 536.31148 1070.60841 81568.39 0.6486 0.00034785 -0.041799 -2.2417E-05 0.60681 0.00032544 536.311538545827 541.315530316192 105.99 0.85594 105.99 105.64 106.5 0 225 43 9 0 0 0 7.17E-06 3 60490 130.28 90.955 1 3.1053 2.6765 0 68067000 15467000 52600000 22650 343 8522 8720 35532;35533;35534 35533 LNIDSIIQR 9 0 1 Unmodified _LNIDSIIQR_ 0 0 0 A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 A0A024RBP2 A0A024RBP2 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.3117 2 536.31148 1070.60841 82207.23 0.62448 0.00033492 -0.10502 -5.6325E-05 0.51946 0.00027859 536.311461759403 541.315511570902 105.89 0.8704 105.89 105.42 106.29 0 283 54 9 0 0 0 0.00022612 2 59486 105.57 77.831 1 3.1809 2.7752 0 53051000 13005000 40047000 22651 343 8522 8720 35535;35536 35536 LNIEELLK 8 1 0 Unmodified _LNIEELLK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.2997 2 486.292225 970.569897 88709.97 0.32121 0.0001562 -0.0010581 -5.1455E-07 0.32016 0.00015569 486.292156493896 490.299259179396 109.39 0.79647 109.39 109.03 109.83 0 231 57 6 0 0 0 0.0022675 2 68405 101.33 22.557 1 1.5043 1.4835 0 24787000 10351000 14436000 22652 1945 8523 8721 35537;35538 35538 LNIEELLK 8 1 0 Unmodified _LNIEELLK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2993 2 486.292225 970.569897 88175.57 0.3661 0.00017803 -0.088506 -4.304E-05 0.27759 0.00013499 486.292080532979 490.29922149354 108.77 0.66505 108.77 108.34 109.01 0 202 45 6 0 0 0 0.0045746 2 69731 93.195 21.318 1 1.4381 1.4672 0 25911000 10567000 15344000 22653 1945 8523 8721 35539;35540 35540 LNIEELLK 8 1 0 Unmodified _LNIEELLK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.2924 2 486.292225 970.569897 86957.23 0.4473 0.00021752 0.43579 0.00021192 0.8831 0.00042944 486.292365518763 490.299440998996 121.04 0.6938 121.04 120.81 121.51 0 117 31 8 0 0 0 0.029249 2 71928 52.716 14.299 1 2.6053 2.033 0 12068000 3097600 8970900 22654 1945 8523 8721 35541;35542 35542 LNIEELLK 8 1 0 Unmodified _LNIEELLK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 490.2995 2 486.292225 970.569897 87659.68 0.47119 0.00022913 0.045432 2.2093E-05 0.51662 0.00025123 486.292104830593 490.299219799298 120.89 0.54266 120.89 120.61 121.15 0 106 23 6 0 0 0 0.0022675 2 70843 101.33 17.635 1 2.6185 2.1405 0 8247500 1765600 6481900 22655 1945 8523 8721 35543;35544 35543 LNIIIVAEGAIDK 13 1 0 Unmodified _LNIIIVAEGAIDK_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;B4E162 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.9163 2 684.908485 1367.80242 NaN NaN NaN -0.049933 -3.42E-05 NaN NaN NaN NaN 132.88 0.28629 132.88 132.71 133 0 0 0 0 0.0026901 1 80784 68.069 22.908 1 NaN NaN 0 1243100 0 1243100 22656 61 8524 8722 35545 35545 LNILDTLSK 9 1 0 Unmodified _LNILDTLSK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q13041;H7C1H2 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.8102 2 508.802957 1015.59136 NaN NaN NaN -0.0014521 -7.3885E-07 NaN NaN NaN NaN 98.542 0.85345 98.542 98.328 99.182 -7.6294E-06 0 0 0 0.037468 1 60207 51.066 28.326 1 NaN NaN 0 18696000 0 18696000 22657 1707 8525 8723 35546 35546 LNILDTLSK 9 1 0 Unmodified _LNILDTLSK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q13041;H7C1H2 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.8103 2 508.802957 1015.59136 86600.84 0.30889 0.00015716 0.25007 0.00012724 0.55896 0.0002844 508.802971061221 512.810143531323 98.001 0.81084 98.001 97.481 98.292 0 252 66 6 0 0 0 0.001341 2 61040 86.67 53.408 1 2.3867 2.4257 0 30145000 8536300 21609000 22658 1707 8525 8723 35547;35548 35547 LNIPAILR 8 0 1 Unmodified _LNIPAILR_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2975 2 455.297645 908.580737 89878.01 0.12559 5.7181E-05 0.60343 0.00027474 0.72902 0.00033192 455.297555416863 460.302568541338 104.03 1.1853 104.03 103.61 104.79 7.6294E-06 275 96 5 0 0 0 0.0092066 3 64024 75.311 41.572 1 0.71517 0.74279 0 22381000 12437000 9944000 22659 590 8526 8724 35549;35550;35551 35550 LNIPAILR 8 0 1 Unmodified _LNIPAILR_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.3021 2 455.297645 908.580737 89813.63 0.29096 0.00013247 0.47641 0.00021691 0.76737 0.00034938 455.297507859515 460.302672243366 103.11 1.1289 103.11 102.79 103.92 0 244 92 5 0 0 0 0.0071364 2 65047 84.244 46.598 1 0.73107 0.80596 0 41320000 24279000 17040000 22660 590 8526 8724 35552;35553 35553 LNIPAILR 8 0 1 Unmodified _LNIPAILR_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 455.2972 2 455.297645 908.580737 90843.27 0.33102 0.00015071 -0.1625 -7.3986E-05 0.16852 7.6725E-05 455.297478960357 460.301612390702 116.19 0.47653 116.19 115.95 116.43 7.6294E-06 95 20 6 0 0 0 0.013659 1 68174 64.803 31.065 1 1.6257 1.3926 0 6075100 2404800 3670400 22661 590 8526 8724 35554 35554 LNIPAILR 8 0 1 Unmodified _LNIPAILR_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 460.302 2 455.297645 908.580737 90450.6 0.34325 0.00015628 -0.0072709 -3.3104E-06 0.33598 0.00015297 455.297471672091 460.301729468178 115.96 0.53619 115.96 115.73 116.26 -7.6294E-06 103 26 5 0 0 0 0.063595 1 67004 38.792 23.352 1 1.6234 1.3519 0 6260800 1995500 4265400 22662 590 8526 8724 35555 35555 LNIRPLLR 8 0 2 Unmodified _LNIRPLLR_ 0 0 1 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 332.2221 3 332.222188 993.644734 103711.4 -0.077859 -2.5866E-05 0.027355 9.088E-06 -0.050504 -1.6778E-05 332.222116390136 338.894358820316 69.462 0.80853 69.462 68.987 69.795 0 227 68 4 0 0 0 0.00056427 2 40310 111.01 74.612 1 0.9554 1.0322 0 19575000 9411900 10163000 22663 794 8527 8725 35556;35557 35557 LNIRPLLR 8 0 2 Unmodified _LNIRPLLR_ 0 0 1 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 338.8945 3 332.222188 993.644734 104130.9 0.075659 2.5136E-05 -0.13327 -4.4276E-05 -0.057613 -1.914E-05 332.22209740372 338.894296267955 66.722 0.84823 66.722 66.365 67.213 0 238 72 5 0 0 0 0.0092027 2 39456 58.815 38.262 1 0.9194 1.0388 0 30330000 15577000 14754000 22664 794 8527 8725 35558;35559 35559 LNISFPATGCQK 12 1 0 Unmodified _LNISFPATGCQK_ 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3398 2 668.339912 1334.66527 69914.79 0.48994 0.00032744 -0.3057 -0.00020431 0.18423 0.00012313 668.340503156878 672.346896670962 81.18 1.9445 81.18 80.564 82.508 0 1126 168 12 0 0 0 0.00019628 6 48670 90.15 90.15 1 0.77868 0.94849 0 2764000000 1539700000 1224300000 22665 649 8528 8726 35560;35561;35562;35563;35564;35565 35562 LNISFPATGCQK 12 1 0 Unmodified _LNISFPATGCQK_ 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3478 2 668.339912 1334.66527 70624.27 0.71351 0.00047686 -0.50695 -0.00033882 0.20655 0.00013805 668.340528189672 672.346756167556 80.093 1.7692 80.093 79.56 81.329 0 889 144 13 0 0 0 4.3101E-18 3 48610 145.99 145.99 1 0.75927 0.90025 0 3700700000 2057600000 1643100000 22666 649 8528 8726 35566;35567;35568 35567 LNISFPATGCQK 12 1 0 Unmodified _LNISFPATGCQK_ 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.3405 2 668.339912 1334.66527 70880.98 0.60064 0.00040143 -0.83761 -0.00055981 -0.23698 -0.00015838 668.340738374759 672.346959975999 92.773 2.9211 92.773 92.311 95.232 0 998 185 11 0 0 0 3.4869E-08 6 51608 117.52 117.52 1 1.5201 1.3877 0 1194300000 460000000 734300000 22667 649 8528 8726 35569;35570;35571;35572;35573;35574 35570 LNISFPATGCQK 12 1 0 Unmodified _LNISFPATGCQK_ 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.3404 2 668.339912 1334.66527 69825.02 0.32559 0.00021761 -0.60176 -0.00040218 -0.27616 -0.00018457 668.340891533979 672.347144788612 92.685 3.5241 92.685 92.072 95.596 0 1301 224 13 0 0 0 2.8609E-05 6 50655 99.973 99.973 1 1.5173 1.3406 0 911700000 362540000 549160000 22668 649 8528 8726 35575;35576;35577;35578;35579;35580 35576 LNIWGEAR 8 0 1 Unmodified _LNIWGEAR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BU55 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.7591 2 479.758884 957.503215 NaN NaN NaN 1.4655 0.00070308 NaN NaN NaN NaN 70.51 0.40884 70.51 70.266 70.675 0 0 0 0 0.024775 1 42060 62.464 38.278 1 NaN NaN 0 8626500 8626500 0 22669 1699 8529 8727 35581 35581 LNLAFVANLFNK 12 1 0 Unmodified _LNLAFVANLFNK_ 0 0 0 H7C4N2;B4DG31;Q96HI1;B4DPW9;A0A0A0MSQ0;Q53GY0;P13797 H7C4N2 H7C4N2 PLS3 Plastin-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.8983 2 682.390262 1362.76597 NaN NaN NaN -0.027109 -1.8499E-05 NaN NaN NaN NaN 130.71 0.48972 130.71 130.43 130.92 0 0 0 0 0.0061665 1 85213 60.828 42.053 1 NaN NaN 0 1251100 0 1251100 22670 480 8530 8728 35582 35582 LNLAFVANLFNK 12 1 0 Unmodified _LNLAFVANLFNK_ 0 0 0 H7C4N2;B4DG31;Q96HI1;B4DPW9;A0A0A0MSQ0;Q53GY0;P13797 H7C4N2 H7C4N2 PLS3 Plastin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.391 2 682.390262 1362.76597 76542.16 0.78121 0.00053309 -0.28097 -0.00019173 0.50024 0.00034136 682.39027170813 686.397228121223 130.25 0.59599 130.25 129.97 130.56 0 125 39 5 0 0 0 8.0253E-05 2 87031 96.948 96.948 1 1.9204 2.0141 0 4423000 1659200 2763800 22671 480 8530 8728 35583;35584 35584 LNLDNVISVSIGAR 14 0 1 Unmodified _LNLDNVISVSIGAR_ 0 0 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.9184 2 735.917372 1469.82019 74303.87 0.80489 0.00059233 -0.10176 -7.4888E-05 0.70313 0.00051745 736.419173368488 740.920660378044 116.61 0.33878 116.61 116.51 116.85 0 58 22 4 0 0 0 1.8351E-05 1 74515 97.911 97.911 1 0.73716 0.73591 0 8775100 4318600 4456500 22672 2126 8531 8729 35585 35585 LNLDNVISVSIGAR 14 0 1 Unmodified _LNLDNVISVSIGAR_ 0 0 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.9182 2 735.917372 1469.82019 74815.35 0.69509 0.00051153 0.23859 0.00017559 0.93369 0.00068712 735.917268720307 741.424125078413 116.08 0.42989 116.08 115.84 116.27 7.6294E-06 69 27 5 0 0 0 0.0024938 1 75825 48.741 48.741 1 0.70955 0.70492 0 8660200 5785000 2875200 22673 2126 8531 8729 35586 35586 LNLDNVISVSIGAR 14 0 1 Unmodified _LNLDNVISVSIGAR_ 0 0 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.9229 2 735.917372 1469.82019 72365.59 1.0854 0.00079877 0.39904 0.00029366 1.4844 0.0010924 735.917425955614 740.921888569457 128.68 0.4865 128.68 128.42 128.91 0 80 21 7 0 0 0 0.00023944 2 77702 63.727 57.755 1 0.9987 0.82416 0 11541000 5892700 5647800 22674 2126 8531 8729 35587;35588 35588 LNLDNVISVSIGAR 14 0 1 Unmodified _LNLDNVISVSIGAR_ 0 0 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.9177 2 735.917372 1469.82019 71685.77 0.92587 0.00068136 -0.070495 -5.1878E-05 0.85538 0.00062949 736.418943579474 740.921480319747 128.41 0.24161 128.41 128.28 128.52 0 48 9 6 0 0 0 0.00021997 2 76666 66.498 66.498 1 1.09 0.96385 0 3971500 1755400 2216200 22675 2126 8531 8729 35589;35590 35589 LNLDSIIGR 9 0 1 Unmodified _LNLDSIIGR_ 0 0 0 P62136;A0A140VJS9;E9PMD7 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.7971 2 500.792924 999.571294 85337.87 0.35312 0.00017684 -0.038595 -1.9328E-05 0.31452 0.00015751 500.792838158347 505.797081285995 99.429 0.85118 99.429 99.01 99.862 0 289 69 6 0 0 0 0.00022612 1 62358 105.57 71.565 1 0.99296 1.1103 0 44676000 23363000 21312000 22676 1632 8532 8730 35591 35591 LNLDSIIGR 9 0 1 Unmodified _LNLDSIIGR_ 0 0 0 P62136;A0A140VJS9;E9PMD7 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.7921 2 500.792924 999.571294 85211.2 0.66369 0.00033237 0.039197 1.9629E-05 0.70288 0.000352 500.793106873691 505.796989196073 112.91 0.57677 112.91 112.66 113.24 0 104 25 6 0 0 0 0.0042207 2 65745 69.812 47.681 1 1.3895 1.1438 0 11785000 4697900 7086800 22677 1632 8532 8730 35592;35593 35593 LNLDSIIGR 9 0 1 Unmodified _LNLDSIIGR_ 0 0 0 P62136;A0A140VJS9;E9PMD7 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.7972 2 500.792924 999.571294 83493.23 0.32163 0.00016107 0.17247 8.637E-05 0.4941 0.00024744 500.792812321519 505.797050594643 112.82 0.54376 112.82 112.5 113.04 0 110 25 7 0 0 0 0.0049289 1 64591 68.016 33.208 1 1.4182 1.1559 0 9545700 3859100 5686600 22678 1632 8532 8730 35594 35594 LNLEQGR 7 0 1 Unmodified _LNLEQGR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.2299 2 415.229959 828.445365 93519.26 0.21294 8.8419E-05 0.30719 0.00012756 0.52014 0.00021598 415.229900067075 420.234011956606 27.941 0.37275 27.941 27.746 28.119 1.9073E-06 116 24 7 0 0 0 1.2755E-06 3 13039 153.88 25.069 1 1.0438 1.1643 0 84627000 41012000 43615000 22679 2000 8533 8731 35595;35596;35597 35597 LNLEQGR 7 0 1 Unmodified _LNLEQGR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 420.2342 2 415.229959 828.445365 93445.64 -0.086725 -3.6011E-05 0.24476 0.00010163 0.15803 6.562E-05 415.2300000402 420.234089922822 27.523 0.37775 27.523 27.359 27.737 -1.9073E-06 71 19 6 0 0 0 0.018704 1 12803 95.793 15.238 1 1.0393 1.1915 0 82513000 38467000 44046000 22680 2000 8533 8731 35598 35598 LNLHYAVVSK 10 1 0 Unmodified _LNLHYAVVSK_ 0 0 0 Q53HS0;P47897;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A1B0GTT3;A0A0U1RQQ5 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.3371 2 572.329673 1142.64479 82696.13 0.36207 0.00020722 -0.295 -0.00016884 0.067065 3.8383E-05 572.830837270864 576.336812126894 53.978 0.31025 53.978 53.808 54.118 0 66 25 4 0 0 0 0.0051694 1 30242 60.518 51.656 1 1.5555 1.5553 0 9767100 4288300 5478800 22681 1575 8534 8732 35599 35599 LNLIHSEISNLAGFEVEAIINPTNADIDLK 30 1 0 Unmodified _LNLIHSEISNLAGFEVEAIINPTNADIDLK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1088.9109 3 1088.57678 3262.70852 57210.1 -0.44754 -0.00048718 -0.45803 -0.0004986 -0.90557 -0.00098578 1088.91083825198 1091.58181431176 133.32 0.25153 133.32 133.19 133.44 0 57 6 13 0 0 0 7.5874E-80 1 89523 167.97 167.97 1 1.2839 1.5139 0 704090000 316180000 387910000 22682 1401 8535 8733 35600 35600 LNLIHSEISNLAGFEVEAIINPTNADIDLK 30 1 0 Unmodified _LNLIHSEISNLAGFEVEAIINPTNADIDLK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1091.5822 3 1088.57678 3262.70852 57269.92 0.42658 0.00046437 -0.027514 -2.9951E-05 0.39907 0.00043442 1089.24526777692 1091.5821790426 134.84 0.32297 134.84 134.63 134.95 0 31 6 13 0 0 0 7.0129E-20 2 81672 80.93 80.93 1 1.2784 1.0992 0 159590000 68514000 91079000 22683 1401 8535 8733 35601;35602 35601 LNLIHSEISNLAGFEVEAIINPTNADIDLK 30 1 0 Unmodified _LNLIHSEISNLAGFEVEAIINPTNADIDLK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1089.2455 3 1088.57678 3262.70852 58144.1 0.35143 0.00038256 -0.21912 -0.00023853 0.1323 0.00014402 1089.24504529973 1091.91630331753 143.69 0.32759 143.69 143.63 143.95 0 225 31 11 0 0 0 0.024766 1 84303 15.046 15.046 1 1.1046 0.8973 0 2898300 1386400 1511900 22684 1401 8535 8733 35603 35603 LNLLAHSRPPVPEWDISQDPPK 22 1 1 Unmodified _LNLLAHSRPPVPEWDISQDPPK_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.8431 4 628.085403 2508.31251 76144.91 0.67645 0.00042487 -0.31512 -0.00019792 0.36133 0.00022695 628.085208374347 632.590954543129 109.26 0.37862 109.26 109.11 109.48 7.6294E-06 94 17 8 0 0 0 0.058007 1 62896 7.0315 7.0315 1 1.5303 1.2657 0 5546100 2062300 3483700 22685 2038 8536 8734 35604 35604 LNLLAHSRPPVPEWDISQDPPK 22 1 1 Unmodified _LNLLAHSRPPVPEWDISQDPPK_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.8416 4 628.085403 2508.31251 78224.51 0.68775 0.00043196 -0.085247 -5.3543E-05 0.6025 0.00037842 628.336138540745 632.841431421304 109 0.42803 109 108.81 109.24 7.6294E-06 86 19 7 0 0 0 0.033963 1 61788 12.677 12.677 1 1.5818 1.3376 0 3636800 1559100 2077700 22686 2038 8536 8734 35605 35605 LNLLDTCAVCHQNIQSR 17 0 1 Unmodified _LNLLDTCAVCHQNIQSR_ 0 0 0 A0A024R784;O15164 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.6691 3 681.335052 2040.98333 NaN NaN NaN -0.57738 -0.00039339 NaN NaN NaN NaN 74.288 0.39304 74.288 74.056 74.449 0 0 0 0 8.6502E-06 1 44657 77.221 66.736 1 NaN NaN 0 8171500 8171500 0 22687 217 8537 8735 35606 35606 LNLLDTCAVCHQNIQSR 17 0 1 Unmodified _LNLLDTCAVCHQNIQSR_ 0 0 0 A0A024R784;O15164 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.6697 3 681.335052 2040.98333 73608.13 0.53018 0.00036123 -0.38689 -0.0002636 0.14329 9.7631E-05 681.669170653184 684.671352633466 86.391 0.43901 86.391 86.179 86.618 0 160 31 7 0 0 0 0.00014845 4 47344 47.568 47.568 1 1.3742 1.1547 0 4342700 1984300 2358500 22688 217 8537 8735 35607;35608;35609;35610 35607 LNLLDTCAVCHQNIQSR 17 0 1 Unmodified _LNLLDTCAVCHQNIQSR_ 0 0 0 A0A024R784;O15164 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.6697 3 681.335052 2040.98333 74134.09 0.60451 0.00041188 -0.48581 -0.000331 0.1187 8.0875E-05 681.334968595069 684.671188244623 86.418 0.52806 86.418 86.181 86.709 0 130 27 7 0 0 0 0.00035209 2 46572 42.913 42.913 1 1.4197 1.2503 0 3636700 1229000 2407700 22689 217 8537 8735 35611;35612 35611 LNLLGR 6 0 1 Unmodified _LNLLGR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 343.2211 2 343.221406 684.428259 105974.5 0.077303 2.6532E-05 -0.50286 -0.00017259 -0.42556 -0.00014606 343.221231064686 348.225271415923 59.672 0.6651 59.672 59.302 59.967 0 117 53 4 0 0 0 0.03571 1 33976 117.54 0 1 1.1109 1.13 0 14925000 5948900 8976400 22690 1873 8538 8736 35613 35613 LNLLHEFLQTEIK 13 1 0 Unmodified _LNLLHEFLQTEIK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;K7EJL0;K7EMU8 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.6382 3 533.303124 1596.88754 85353.84 0.56666 0.0003022 -0.10224 -5.4526E-05 0.46442 0.00024767 533.302923635675 535.974405765111 114.65 0.61482 114.65 114.35 114.96 0 137 38 5 0 0 0 4.17E-05 2 74483 89.629 89.629 1 0.33893 0.34008 0 6908700 5163400 1745200 22691 222 8539 8737 35614;35615 35614 LNLLHEFLQTEIK 13 1 0 Unmodified _LNLLHEFLQTEIK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;K7EJL0;K7EMU8 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.9751 3 533.303124 1596.88754 83707.72 0.64484 0.0003439 -0.12785 -6.8182E-05 0.51699 0.00027571 533.303055076321 535.974472636147 125.45 0.45052 125.45 125.19 125.64 0 70 15 7 0 0 0 0.00011282 1 75235 59.607 59.607 1 1.0098 0.80105 0 6436800 3240700 3196200 22692 222 8539 8737 35616 35616 LNLLHEFLQTEIK 13 1 0 Unmodified _LNLLHEFLQTEIK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;K7EJL0;K7EMU8 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.3029 3 533.303124 1596.88754 83591.97 0.67799 0.00036157 -0.40166 -0.00021421 0.27633 0.00014737 533.302917475358 536.308631614482 125.19 0.42999 125.19 124.97 125.4 0 80 17 6 0 0 0 0.0039339 1 74157 39.033 39.033 1 0.94322 0.76873 0 4616700 2326300 2290400 22693 222 8539 8737 35617 35617 LNLNNTVLSK 10 1 0 Unmodified _LNLNNTVLSK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.3322 2 558.324588 1114.63462 82162.34 0.71214 0.00039761 -0.25292 -0.00014121 0.45922 0.0002564 558.32438385501 562.331540371419 67.627 0.90858 67.627 67.225 68.133 7.6294E-06 323 78 6 0 0 0 0.0050427 1 38922 74.165 57.832 1 2.5053 2.5091 0 26714000 7558500 19155000 22694 1454 8540 8738 35618 35618 LNLNNTVLSK 10 1 0 Unmodified _LNLNNTVLSK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.3254 2 558.324588 1114.63462 NaN NaN NaN -0.13476 -7.5237E-05 NaN NaN NaN NaN 66.534 0.81403 66.534 66.123 66.937 0 0 0 0 0.018622 1 39398 54.982 20.978 1 NaN NaN 0 9170200 9170200 0 22695 1454 8540 8738 35619 35619 LNLNNTVLSK 10 1 0 Unmodified _LNLNNTVLSK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.3321 2 558.324588 1114.63462 83284.57 0.39862 0.00022256 0.14967 8.3567E-05 0.54829 0.00030613 558.324635531608 562.331578391496 77.774 0.7004 77.774 77.465 78.166 -7.6294E-06 194 46 6 0 0 0 0.0053631 2 41648 70.028 45.253 1 1.1734 0.92607 0 4089500 2018600 2070800 22696 1454 8540 8738 35620;35621 35620 LNLSCIHSPVVNELMR 16 0 1 Oxidation (M) _LNLSCIHSPVVNELM(ox)R_ LNLSCIHSPVVNELM(1)R LNLSCIHSPVVNELM(109.79)R 0 1 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.6616 3 633.325606 1896.95499 79575.23 0.72388 0.00045845 0.18281 0.00011578 0.90669 0.00057423 633.660224034964 636.99618973445 91.867 0.77286 91.867 91.501 92.274 -7.6294E-06 359 68 8 0 0 0 1.29E-09 2 55533 109.79 109.79 1 1.3727 1.474 0 46791000 18835000 27956000 22697 2129 8541 8739 35622;35623 35623 1960 LNLSCIHSPVVNELMR 16 0 1 Oxidation (M) _LNLSCIHSPVVNELM(ox)R_ LNLSCIHSPVVNELM(1)R LNLSCIHSPVVNELM(82.59)R 0 1 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.9967 3 633.325606 1896.95499 76956.98 0.89575 0.0005673 0.37598 0.00023812 1.2717 0.00080541 633.326247926812 636.996237383674 90.759 0.7814 90.759 90.428 91.21 -7.6294E-06 331 63 8 0 0 0 1.5811E-05 2 56053 82.59 82.59 1 1.4082 1.6049 0 135540000 59951000 75586000 22698 2129 8541 8739 35624;35625 35624 1960 LNLSCIHSPVVNELMR 16 0 1 Oxidation (M) _LNLSCIHSPVVNELM(ox)R_ LNLSCIHSPVVNELM(1)R LNLSCIHSPVVNELM(68.17)R 0 1 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.996 3 633.325606 1896.95499 76653.82 0.57728 0.0003656 -0.17105 -0.00010833 0.40623 0.00025728 633.325641327494 636.661446310449 105.45 0.56582 105.45 105.1 105.66 0 222 38 8 0 0 0 3.8885E-05 1 60059 68.173 68.173 1 0.51899 0.44635 0 47834000 31916000 15917000 22699 2129 8541 8739 35626 35626 1960 LNLSCIHSPVVNELMR 16 0 1 Oxidation (M) _LNLSCIHSPVVNELM(ox)R_ LNLSCIHSPVVNELM(1)R LNLSCIHSPVVNELM(80.36)R 0 1 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.66 3 633.325606 1896.95499 76118.06 0.58601 0.00037114 -0.38561 -0.00024422 0.2004 0.00012692 633.659856652462 636.661564406456 105.12 0.64851 105.12 104.73 105.38 0 257 40 9 0 0 0 2.2626E-05 2 58982 80.361 80.361 1 0.5951 0.51737 0 24504000 15552000 8951500 22700 2129 8541 8739 35627;35628 35627 1960 LNLSCIHSPVVNELMR 16 0 1 Unmodified _LNLSCIHSPVVNELMR_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.994 3 627.993967 1880.96007 75539.1 0.64655 0.00040603 -0.20383 -0.000128 0.44272 0.00027803 627.993816852997 631.330722430599 116.18 0.63565 116.18 115.98 116.61 0 133 27 9 0 0 0 2.764E-18 2 68207 133.71 133.71 1 1.0811 0.90115 0 22707000 11127000 11579000 22701 2129 8541 8740 35629;35630 35630 LNLSCIHSPVVNELMR 16 0 1 Unmodified _LNLSCIHSPVVNELMR_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.329 3 627.993967 1880.96007 75576.74 0.88242 0.00055415 -0.43035 -0.00027026 0.45206 0.00028389 628.328229787621 631.330110567337 115.97 0.50897 115.97 115.73 116.24 0 151 25 10 0 0 0 4.3131E-05 1 67085 76.151 76.151 1 1.0801 0.94211 0 40870000 19562000 21308000 22702 2129 8541 8740 35631 35631 LNLSQVR 7 0 1 Unmodified _LNLSQVR_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.2484 2 415.248152 828.481751 94948.04 0.38686 0.00016064 0.33042 0.00013721 0.71728 0.00029785 415.248322429791 420.252110219364 42.908 0.80716 42.908 42.512 43.319 0 280 67 6 0 0 0 0.0076797 1 23292 128.82 39.447 1 1.2902 1.4228 0 41381000 17816000 23565000 22703 452 8542 8741 35632 35632 LNLSTRPEK 9 1 1 Unmodified _LNLSTRPEK_ 0 0 1 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 359.2124 3 353.204862 1056.59276 100145.2 0.10346 3.6542E-05 -0.85234 -0.00030105 -0.74888 -0.00026451 353.204784441622 359.212305770674 25.281 0.38098 25.281 25.012 25.393 0 50 14 6 0 0 0 0.0035413 1 10892 61.78 28.402 1 1.9516 2.2083 0 16030000 5449100 10580000 22704 892 8543 8742 35633 35633 LNLVDLAGSENIGR 14 0 1 Unmodified _LNLVDLAGSENIGR_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.9036 2 735.89918 1469.78381 70666.41 0.79748 0.00058686 0.29112 0.00021424 1.0886 0.0008011 735.899777016714 740.903319427643 105.21 0.6171 105.21 105.01 105.63 0 191 46 6 0 0 0 9.4858E-05 3 65043 86.114 52.89 1 2.3637 2.373 0 17197000 5079500 12118000 22705 1602 8544 8743 35634;35635;35636 35634 LNLVDLAGSENIGR 14 0 1 Unmodified _LNLVDLAGSENIGR_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.9044 2 735.89918 1469.78381 70447.44 0.93787 0.00069018 0.25927 0.0001908 1.1971 0.00088097 735.89993999245 740.903247634643 104.71 0.64626 104.71 104.28 104.93 0 191 48 6 0 0 0 0.00013741 2 66160 78.903 53.197 1 2.1419 2.3427 0 30611000 9835100 20776000 22706 1602 8544 8743 35637;35638 35637 LNLVDLAGSENIGR 14 0 1 Unmodified _LNLVDLAGSENIGR_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.4034 2 735.89918 1469.78381 NaN NaN NaN -0.46638 -0.00034321 NaN NaN NaN NaN 116.84 0.40969 116.84 116.66 117.07 0 0 0 0 0.004931 1 68674 56.936 28.923 1 NaN NaN 0 2382800 0 2382800 22707 1602 8544 8743 35639 35639 LNLVEAFVEDAELR 14 0 1 Unmodified _LNLVEAFVEDAELR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;V9H0D5;V9H023;B4DL39;B4DSB9;V9H0B2;Q0ZAJ1 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.4282 2 809.42777 1616.84099 68125.67 0.21211 0.00017169 0.23851 0.00019306 0.45062 0.00036475 809.929885398616 814.432297904565 133.36 0.38445 133.36 133.16 133.54 0 40 10 7 0 0 0 0.00010376 1 87318 84.605 84.605 1 1.0167 1.0503 0 23765000 10123000 13642000 22708 1237 8545 8744 35640 35640 LNLVEAFVEDAELR 14 0 1 Unmodified _LNLVEAFVEDAELR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;V9H0D5;V9H023;B4DL39;B4DSB9;V9H0B2;Q0ZAJ1 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.4332 2 809.42777 1616.84099 68358.1 0.76523 0.0006194 -0.1796 -0.00014537 0.58563 0.00047403 809.427687254139 814.431547892986 133.16 0.40219 133.16 132.9 133.3 0 80 15 8 0 0 0 2.217E-09 2 89262 117.23 117.23 1 1.111 1.1193 0 19483000 9259700 10224000 22709 1237 8545 8744 35641;35642 35641 LNMATLR 7 0 1 Oxidation (M) _LNM(ox)ATLR_ LNM(1)ATLR LNM(60.76)ATLR 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.7326 2 417.728738 833.442923 NaN NaN NaN 0.50331 0.00021025 NaN NaN NaN NaN 24.592 0.38771 24.592 24.364 24.752 0 0 0 0 0.014036 1 10251 60.76 16.068 1 NaN NaN 0 20229000 0 20229000 22710 1691 8546 8745 35643 35643 1515 LNMATLR 7 0 1 Oxidation (M) _LNM(ox)ATLR_ LNM(1)ATLR LNM(65.68)ATLR 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.7329 2 417.728738 833.442923 92593.09 -0.036822 -1.5382E-05 1.4264 0.00059586 1.3896 0.00058048 417.728546913003 422.732811743594 24.395 0.75937 24.395 23.792 24.552 0 88 31 5 0 0 0 0.015676 1 10055 65.676 12.513 1 2.3811 2.4987 0 22912000 5642300 17270000 22711 1691 8546 8745 35644 35644 1515 LNNDDNVDGLLVQLPLPEHIDER 23 0 1 Unmodified _LNNDDNVDGLLVQLPLPEHIDER_ 0 0 0 B2R7W0;P13995 B2R7W0 B2R7W0 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.4521 3 876.780313 2627.31911 65234.59 0.83814 0.00073486 -0.099113 -8.69E-05 0.73902 0.00064796 877.113088772474 880.450394382588 120.82 0.40689 120.82 120.62 121.03 0 129 26 8 0 0 0 0.038365 1 80018 12.433 12.433 1 2.4069 2.365 0 13586000 3253100 10333000 22712 853 8547 8746 35645 35645 LNNELLAK 8 1 0 Unmodified _LNNELLAK_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.7692 2 457.768917 913.523281 NaN NaN NaN -0.76068 -0.00034822 NaN NaN NaN NaN 42.261 0.45132 42.261 42.052 42.503 0 0 0 0 0.013507 1 22465 71.922 29.828 1 NaN NaN 0 20029000 20029000 0 + 22713 1164 8548 8747 35646 35646 LNNELLAK 8 1 0 Unmodified _LNNELLAK_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 457.7688 2 457.768917 913.523281 NaN NaN NaN 0.23413 0.00010718 NaN NaN NaN NaN 47.736 0.23548 47.736 47.601 47.837 -3.8147E-06 0 0 0 0.017095 1 22620 67.169 29.036 1 NaN NaN 0 2062100 2062100 0 + 22714 1164 8548 8747 35647 35647 LNNLVLFDK 9 1 0 Unmodified _LNNLVLFDK_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.3186 2 538.310949 1074.60735 82722.56 0.68754 0.00037011 -0.037564 -2.0221E-05 0.64998 0.00034989 538.310922208622 542.317863958279 89.982 1.5489 89.982 89.581 91.13 0 458 128 7 0 0 0 7.9593E-06 3 54640 129.42 100.5 1 1.1864 1.3782 0 249030000 109670000 139360000 22715 1649 8549 8748 35648;35649;35650 35650 LNNLVLFDK 9 1 0 Unmodified _LNNLVLFDK_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.3181 2 538.310949 1074.60735 82729.84 0.69697 0.00037519 -0.12068 -6.4964E-05 0.57629 0.00031022 538.310883589536 542.317836751932 88.864 1.4303 88.864 88.46 89.89 0 581 119 7 0 0 0 9.1563E-06 4 55105 128.12 98.96 1 1.1865 1.379 0 232480000 111870000 120610000 22716 1649 8549 8748 35651;35652;35653;35654 35653 LNNLVLFDK 9 1 0 Unmodified _LNNLVLFDK_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.3112 2 538.310949 1074.60735 83131.22 0.5453 0.00029354 0.14013 7.5436E-05 0.68543 0.00036898 538.310966841707 542.317949725954 102.72 1.2872 102.72 102.4 103.69 -7.6294E-06 354 85 6 0 0 0 0.00013047 2 58289 108.98 87.127 1 0.66947 0.52293 0 16126000 9522300 6604000 22717 1649 8549 8748 35655;35656 35656 LNNLVLFDK 9 1 0 Unmodified _LNNLVLFDK_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.3111 2 538.310949 1074.60735 NaN NaN NaN 0.30531 0.00016435 NaN NaN NaN NaN 102.57 1.1574 102.57 102.17 103.33 0 0 0 0 0.053182 1 57170 46.001 34.096 1 NaN NaN 0 7546400 7546400 0 22718 1649 8549 8748 35657 35657 LNNPGSTVFTEDCNILLK 18 1 0 Unmodified _LNNPGSTVFTEDCNILLK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1018.0131 2 1018.01187 2034.00919 61608.07 0.46764 0.00047606 0.59637 0.00060711 1.064 0.0010832 1018.51304612131 1022.52110720409 109.1 0.37381 109.1 108.94 109.31 0 78 23 5 0 0 0 3.3994E-05 1 68231 63.76 63.76 1 0.59365 0.6019 0 10220000 6225200 3994700 22719 222 8550 8749 35658 35658 LNNPGSTVFTEDCNILLK 18 1 0 Unmodified _LNNPGSTVFTEDCNILLK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1018.009 2 1018.01187 2034.00919 62362.41 0.27096 0.00027584 0.21876 0.0002227 0.48972 0.00049854 1018.51360977248 1022.52003925445 108.58 0.39136 108.58 108.36 108.75 0 65 24 5 0 0 0 0.00060834 1 69473 43.03 43.03 1 0.46138 0.47337 0 9456600 5862900 3593800 22720 222 8550 8749 35659 35659 LNNPGSTVFTEDCNILLK 18 1 0 Unmodified _LNNPGSTVFTEDCNILLK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1018.5131 2 1018.01187 2034.00919 60307.23 0.2696 0.00027446 0.36422 0.00037078 0.63382 0.00064524 1018.01215193379 1022.5207242487 120.48 0.3551 120.48 120.27 120.62 0 103 15 8 0 0 0 0.0096455 1 71473 29.638 29.638 1 0.85442 0.68597 0 8009100 4168700 3840400 22721 222 8550 8749 35660 35660 LNNSELMGR 9 0 1 Oxidation (M) _LNNSELM(ox)GR_ LNNSELM(1)GR LNNSELM(96.03)GR 0 1 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2623 2 525.255848 1048.49714 82476.3 0.5644 0.00029645 0.022998 1.208E-05 0.58739 0.00030853 525.255699771227 530.259950082597 22.413 0.43139 22.413 22.214 22.646 0 88 27 4 0 0 0 0.00032391 2 8513 96.027 47.24 1 1.3375 1.4067 0 11358000 4718300 6640000 22722 1566 8551 8750 35661;35662 35661 1323 LNPADAPNPVVFVATK 16 1 0 Unmodified _LNPADAPNPVVFVATK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.9545 2 826.953955 1651.89336 66351.02 0.8086 0.00066868 0.19641 0.00016242 1.005 0.0008311 826.953976096755 830.961202678566 106.02 0.86719 106.02 105.65 106.51 0 369 63 10 0 0 0 0.00015249 2 65679 65.895 65.895 1 0.54482 0.61658 0 87690000 56669000 31021000 22723 168 8552 8751 35663;35664 35664 LNPADAPNPVVFVATK 16 1 0 Unmodified _LNPADAPNPVVFVATK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.4553 2 826.953955 1651.89336 66782.02 0.89355 0.00073893 0.13326 0.0001102 1.0268 0.00084913 827.455341553222 830.961053031019 105.31 0.8452 105.31 105.01 105.86 7.6294E-06 427 61 11 0 0 0 2.5079E-06 2 66740 92.151 92.151 1 0.566 0.64905 0 166690000 105760000 60931000 22724 168 8552 8751 35665;35666 35665 LNPADAPNPVVFVATK 16 1 0 Unmodified _LNPADAPNPVVFVATK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 830.9623 2 826.953955 1651.89336 66508.03 0.79209 0.00065502 0.14026 0.00011599 0.93235 0.00077101 826.95405229752 830.961089495495 117.47 1.0796 117.47 117.18 118.26 0 276 47 10 0 0 0 0.00018108 2 69139 71.235 71.235 1 1.893 1.5818 0 49871000 17671000 32200000 22725 168 8552 8751 35667;35668 35667 LNPADAPNPVVFVATK 16 1 0 Unmodified _LNPADAPNPVVFVATK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 826.9547 2 826.953955 1651.89336 66426.73 0.70886 0.0005862 0.1804 0.00014918 0.88927 0.00073538 826.95405539671 830.961062415035 117.27 1.0126 117.27 116.94 117.95 0 279 47 11 0 0 0 0.00015213 2 68101 65.092 65.092 1 1.8257 1.5295 0 46442000 16780000 29662000 22726 168 8552 8751 35669;35670 35670 LNPDLFITGSYDHTVK 16 1 0 Unmodified _LNPDLFITGSYDHTVK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.3129 3 607.312348 1818.91521 77768.24 0.60691 0.00036858 -0.34688 -0.00021067 0.26002 0.00015791 607.312229085758 609.983341299192 107.3 0.89693 107.3 107.05 107.94 0 308 51 10 0 0 0 0.0081989 2 61494 25.44 25.44 1 1.2498 1.0212 0 33814000 14144000 19670000 22727 1936 8553 8752 35671;35672 35672 LNPDLFITGSYDHTVK 16 1 0 Unmodified _LNPDLFITGSYDHTVK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 910.467 2 910.464884 1818.91521 63032.07 0.47082 0.00042867 0.058786 5.3522E-05 0.52961 0.00048219 910.966367776104 914.973122722476 107.1 0.46442 107.1 106.86 107.33 0 127 28 6 0 0 0 0.01374 2 60373 40.066 40.066 1 1.3142 1.0714 0 6552500 2984100 3568500 22728 1936 8553 8752 35673;35674 35673 LNPDLFITGSYDHTVK 16 1 0 Unmodified _LNPDLFITGSYDHTVK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.3182 3 607.312348 1818.91521 77713.55 0.54267 0.00032957 -0.32448 -0.00019706 0.21819 0.00013251 607.646523630984 609.983405322141 107.08 0.8735 107.08 106.8 107.67 0 314 57 10 0 0 0 9.1908E-05 2 60397 42.149 42.149 1 1.1759 0.97 0 30274000 12953000 17321000 22729 1936 8553 8752 35675;35676 35675 LNPFGNTFLNR 11 0 1 Unmodified _LNPFGNTFLNR_ 0 0 0 A0A024R0S6;Q9NZN4;Q8NCJ3;B4DLA1 A0A024R0S6 A0A024R0S6 EHD2 EH domain-containing protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8459 2 646.840936 1291.66732 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.693 1 99.693 99.193 100.19 0 0 0 0 0.016584 1 61055 55.064 35.074 1 22730 57 8554 8753 35677 35677 LNPQEYLTSTACR 13 0 1 Unmodified _LNPQEYLTSTACR_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.8793 2 776.874847 1551.73514 68370.27 0.45953 0.000357 0.44633 0.00034674 0.90586 0.00070374 776.874968588076 781.879583896729 77.323 0.54918 77.323 77.058 77.607 0 247 45 8 0 0 0 0.00015854 2 45701 87.713 68.471 1 0.72189 0.74316 0 24830000 14131000 10699000 22731 1798;321 8555 8754 35678;35679 35679 LNPQEYLTSTACR 13 0 1 Unmodified _LNPQEYLTSTACR_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.8795 2 776.874847 1551.73514 68006.5 0.2324 0.00018055 0.030038 2.3335E-05 0.26244 0.00020388 776.875254904874 781.879289274581 76.383 0.52953 76.383 76.098 76.627 -7.6294E-06 236 42 8 0 0 0 9.3579E-06 2 45989 100.88 81.563 1 0.78785 0.86323 0 31240000 17598000 13642000 22732 1798;321 8555 8754 35680;35681 35681 LNPQEYLTSTACR 13 0 1 Unmodified _LNPQEYLTSTACR_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 781.8796 2 776.874847 1551.73514 66711.52 0.96892 0.00075273 -0.52294 -0.00040626 0.44598 0.00034647 777.375895810996 781.878600002741 88.725 0.647 88.725 88.442 89.089 0 250 42 8 0 0 0 0.00026889 3 48865 67.153 57.466 1 1.4875 1.2779 0 7993600 3149300 4844300 22733 1798;321 8555 8754 35682;35683;35684 35682 LNPQEYLTSTACR 13 0 1 Unmodified _LNPQEYLTSTACR_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 781.8787 2 776.874847 1551.73514 67491.82 0.45574 0.00035405 -0.23755 -0.00018454 0.21819 0.00016951 776.874910984042 781.879065237409 88.751 0.5777 88.751 88.482 89.06 0 235 36 8 0 0 0 0.0014362 3 48061 57.836 48.149 1 1.4239 1.1834 0 5984400 2396700 3587700 22734 1798;321 8555 8754 35685;35686;35687 35685 LNQDQLDAVSK 11 1 0 Unmodified _LNQDQLDAVSK_ 0 0 0 E9PLA9;B4DSF8;G3V153;B3KXU8;Q14444 E9PLA9 E9PLA9 CAPRIN1 Caprin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.8271 2 615.819867 1229.62518 NaN NaN NaN -0.061593 -3.793E-05 NaN NaN NaN NaN 41.794 0.48405 41.794 41.568 42.052 0 0 0 0 2.2948E-06 1 22009 105.4 70.102 1 NaN NaN 0 18215000 0 18215000 22735 954 8556 8755 35688 35688 LNQDQLDAVSK 11 1 0 Unmodified _LNQDQLDAVSK_ 0 0 0 E9PLA9;B4DSF8;G3V153;B3KXU8;Q14444 E9PLA9 E9PLA9 CAPRIN1 Caprin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.8278 2 615.819867 1229.62518 78663.59 0.47967 0.00029539 -0.035194 -2.1673E-05 0.44448 0.00027372 615.819912707044 619.826990044121 40.823 0.59869 40.823 40.556 41.155 -3.8147E-06 156 44 5 0 0 0 5.7643E-10 3 21945 128.91 98.739 1 2.1604 2.1765 0 27895000 10707000 17188000 22736 954 8556 8755 35689;35690;35691 35690 LNQDQLDAVSK 11 1 0 Unmodified _LNQDQLDAVSK_ 0 0 0 E9PLA9;B4DSF8;G3V153;B3KXU8;Q14444 E9PLA9 E9PLA9 CAPRIN1 Caprin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.8276 2 615.819867 1229.62518 78689.57 0.21063 0.00012971 -0.12784 -7.8724E-05 0.082798 5.0989E-05 615.819605103187 619.826887214145 48.402 0.41539 48.402 48.152 48.567 0 109 33 4 0 0 0 0.0078138 1 23540 51.927 41.097 1 1.3323 1.0919 0 2437000 1063200 1373900 22737 954 8556 8755 35692 35692 LNQEVALNLK 10 1 0 Unmodified _LNQEVALNLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.3393 2 571.332413 1140.65027 80485.43 0.48581 0.00027756 0.050728 2.8983E-05 0.53653 0.00030654 571.332326820039 575.339505908254 68.845 0.65686 68.845 68.476 69.133 7.6294E-06 204 57 6 0 0 0 0.0032667 2 40039 65.305 46.866 1 1.3342 1.3591 0 17946000 6566900 11379000 22738 1945 8557 8756 35693;35694 35694 LNQEVALNLK 10 1 0 Unmodified _LNQEVALNLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.3412 2 571.332413 1140.65027 80641.05 0.49172 0.00028093 0.97878 0.00055921 1.4705 0.00084015 571.332422388729 575.340608357243 67.553 0.50692 67.553 67.347 67.854 0 165 41 6 0 0 0 1.3676E-08 1 40074 123.16 83.088 1 1.112 1.139 0 25568000 11368000 14200000 22739 1945 8557 8756 35695 35695 LNQEVALNLK 10 1 0 Unmodified _LNQEVALNLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.3397 2 571.332413 1140.65027 80535.04 0.46789 0.00026732 0.23687 0.00013533 0.70476 0.00040265 571.332287351917 575.339666683815 78.843 0.59842 78.843 78.604 79.202 0 131 34 5 0 0 0 6.1386E-12 1 42379 143.28 109.2 1 2.923 2.3105 0 5157600 1360900 3796800 22740 1945 8557 8756 35696 35696 LNQEVALNLK 10 1 0 Unmodified _LNQEVALNLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.3397 2 571.332413 1140.65027 78804.25 0.4171 0.0002383 0.26809 0.00015317 0.68519 0.00039147 571.332340649569 575.339593890636 79.09 0.57857 79.09 78.812 79.39 0 141 34 6 0 0 0 0.0013651 1 41624 73.985 51.245 1 2.534 2.0738 0 4855400 1444000 3411400 22741 1945 8557 8756 35697 35697 LNQLPSVTLDAVLQGDRER 19 0 2 Unmodified _LNQLPSVTLDAVLQGDRER_ 0 0 1 B2RWP5;Q96L73;Q96MN8;Q96DQ7;Q8NB95 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.7263 3 708.718437 2123.13348 73155.16 0.94664 0.0006709 -0.37316 -0.00026447 0.57348 0.00040644 708.717798028841 715.390783666779 119.05 0.30563 119.05 118.88 119.18 -7.6294E-06 43 13 6 0 0 0 0.0025021 1 70383 31.462 28.271 1 1.5507 1.3875 0 3598300 1250800 2347500 22742 898 8558 8757 35698 35698 LNQPPEDGISSVK 13 1 0 Unmodified _LNQPPEDGISSVK_ 0 0 0 J3QT28;A0A140VJF3;O43684;J3QSX4 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.3597 2 692.359356 1382.70416 74010.01 0.53046 0.00036727 0.40588 0.00028102 0.93635 0.00064829 692.359088962776 696.366641884542 46.891 0.64939 46.891 46.622 47.271 0 301 62 8 0 0 0 0.0012244 1 25372 58.699 51.053 1 1.021 1.1539 0 83351000 41132000 42219000 22743 600 8559 8758 35699 35699 LNQPPEDGISSVK 13 1 0 Unmodified _LNQPPEDGISSVK_ 0 0 0 J3QT28;A0A140VJF3;O43684;J3QSX4 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.3669 2 692.359356 1382.70416 73986.66 0.56922 0.0003941 -0.0039986 -2.7685E-06 0.56522 0.00039133 692.359217765778 696.366359678511 45.869 0.60967 45.869 45.596 46.206 0 274 51 8 0 0 0 5.325E-19 2 25173 145.99 105.64 1 1.0384 1.1705 0 67871000 30519000 37352000 22744 600 8559 8758 35700;35701 35700 LNQPPEDGISSVK 13 1 0 Unmodified _LNQPPEDGISSVK_ 0 0 0 J3QT28;A0A140VJF3;O43684;J3QSX4 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.3663 2 692.359356 1382.70416 73652.39 0.52892 0.0003662 -0.15555 -0.00010769 0.37338 0.00025851 692.359156760462 696.366391610213 54.382 0.71197 54.382 54.078 54.79 0 268 52 8 0 0 0 0.0019347 2 27049 55.806 48.426 1 1.1284 0.89227 0 10549000 4731700 5816900 22745 600 8559 8758 35702;35703 35702 LNQPPEDGISSVK 13 1 0 Unmodified _LNQPPEDGISSVK_ 0 0 0 J3QT28;A0A140VJF3;O43684;J3QSX4 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.3669 2 692.359356 1382.70416 73783.38 0.40575 0.00028093 0.10721 7.4226E-05 0.51296 0.00035515 692.359168236707 696.366458230221 54.944 0.76459 54.944 54.614 55.378 0 276 50 8 0 0 0 0.00011686 2 26777 76.143 65.911 1 1.1945 0.97922 0 8795800 3727800 5068000 22746 600 8559 8758 35704;35705 35704 LNQSPSLAPVK 11 1 0 Unmodified _LNQSPSLAPVK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.3304 2 577.332413 1152.65027 80770.55 0.76175 0.00043978 -0.53887 -0.00031111 0.22287 0.00012867 577.331914526631 581.3392450352 47.464 0.57788 47.464 47.128 47.706 0 217 50 6 0 0 0 0.0032818 2 25592 60.102 36.472 1 0.85992 0.93699 0 49603000 25455000 24148000 22747 878 8560 8759 35706;35707 35706 LNQSPSLAPVK 11 1 0 Unmodified _LNQSPSLAPVK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3326 2 577.332413 1152.65027 80164.18 0.83545 0.00048233 -0.34281 -0.00019792 0.49264 0.00028442 577.332102754623 581.339196713656 46.356 0.46262 46.356 46.086 46.549 0 167 34 7 0 0 0 1.0637E-05 2 25476 108.57 75.729 1 0.82479 0.9291 0 58991000 32518000 26473000 22748 878 8560 8759 35708;35709 35708 LNQSPSLAPVK 11 1 0 Unmodified _LNQSPSLAPVK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.3322 2 577.332413 1152.65027 80207.8 0.32885 0.00018986 0.070882 4.0922E-05 0.39973 0.00023078 577.332231543582 581.339545294074 54.705 0.59444 54.705 54.43 55.025 0 218 44 7 0 0 0 0.012449 2 26679 47.853 24.06 1 1.7443 1.428 0 5451300 1829000 3622300 22749 878 8560 8759 35710;35711 35711 LNQSQREELGLIEQAYDNPHEALSR 25 0 2 Unmodified _LNQSQREELGLIEQAYDNPHEALSR_ 0 0 1 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.0257 4 728.363967 2909.42676 72333.65 0.53931 0.00039282 0.076917 5.6024E-05 0.61623 0.00044884 728.614564128508 733.618813142306 104.57 0.44985 104.57 104.34 104.79 7.6294E-06 108 24 7 0 0 0 0.0055254 1 58548 27.09 27.09 1 0.62344 0.56149 0 2665400 1679900 985460 22750 1854 8561 8760 35712 35712 LNQVCFDDDGTSSPQDR 17 0 1 Unmodified _LNQVCFDDDGTSSPQDR_ 0 0 0 Q8N1F7;A8K897;H3BVG0;H3BPA9 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 977.4179 2 977.415793 1952.81703 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.709 1 53.709 53.209 54.209 -3.8147E-06 0 0 0 0.00053773 1 30093 60.157 47.39 1 22751 1904 8562 8761 35713 35713 LNQVCFDDDGTSSPQDR 17 0 1 Unmodified _LNQVCFDDDGTSSPQDR_ 0 0 0 Q8N1F7;A8K897;H3BVG0;H3BPA9 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 982.4214 2 977.415793 1952.81703 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.729 1 53.729 53.229 54.229 0 0 0 0 2.1685E-05 1 30106 89.959 82.048 1 22752 1904 8562 8761 35714 35714 LNQVCFDDDGTSSPQDR 17 0 1 Unmodified _LNQVCFDDDGTSSPQDR_ 0 0 0 Q8N1F7;A8K897;H3BVG0;H3BPA9 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 982.4191 2 977.415793 1952.81703 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.838 1 52.838 52.338 53.338 0 0 0 0 1.4914E-05 1 30190 91.62 85.649 1 22753 1904 8562 8761 35715 35715 LNQVLVDIR 9 0 1 Unmodified _LNQVLVDIR_ 0 0 0 B4DSL6;A8K5D9;A0A024RA49;Q9NQW6 B4DSL6 B4DSL6 ANLN Actin-binding protein anillin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.3254 2 535.321848 1068.62914 83131.16 0.71483 0.00038267 -0.30086 -0.00016106 0.41398 0.00022161 535.321806533369 540.325703395032 79.716 0.55309 79.716 79.476 80.029 0 128 48 4 0 0 0 0.0019984 1 47357 78.113 45.971 1 1.9601 2.0294 0 13782000 4153800 9628600 22754 294 8563 8762 35716 35716 LNQYFQK 7 1 0 Unmodified _LNQYFQK_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.748 2 470.747985 939.481417 88293.42 0.35454 0.0001669 -0.083044 -3.9093E-05 0.2715 0.00012781 470.747972003159 474.754975554355 33.066 1.0354 33.066 32.535 33.57 0 468 100 6 0 0 0 0.027041 2 16292 91.584 24.591 1 1.2961 1.4559 0 68894000 29580000 39314000 22755 1691 8564 8763 35717;35718 35718 LNQYFQK 7 1 0 Unmodified _LNQYFQK_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.7548 2 470.747985 939.481417 NaN NaN NaN -0.087792 -4.1328E-05 NaN NaN NaN NaN 32.579 1.1179 32.579 32 33.118 0 0 0 0 0.026567 1 15964 91.584 24.591 1 NaN NaN 0 40920000 0 40920000 22756 1691 8564 8763 35719 35719 LNQYFQK 7 1 0 Unmodified _LNQYFQK_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 474.7553 2 470.747985 939.481417 88374.96 0.092397 4.3496E-05 0.14592 6.869E-05 0.23831 0.00011219 470.748036893712 474.755071289741 38.012 1.0736 38.012 37.394 38.468 0 382 85 6 0 0 0 0.024809 1 16659 89.703 15.368 1 1.5838 1.3025 0 10026000 3879300 6146300 22757 1691 8564 8763 35720 35720 LNSAIIYDR 9 0 1 Unmodified _LNSAIIYDR_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.793 2 532.790381 1063.56621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.314 1 22.314 21.814 22.814 -1.9073E-06 0 0 0 0.0093753 1 8340 64.265 12.919 1 22758 1014 8565 8764 35721 35721 LNSGGGLSEELGSAR 15 0 1 Unmodified _LNSGGGLSEELGSAR_ 0 0 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.3651 2 723.862794 1445.71104 73671.18 0.69912 0.00050607 -0.85582 -0.0006195 -0.1567 -0.00011343 723.862396135746 728.86694812569 57.683 0.58285 57.683 57.353 57.935 0 178 47 6 0 0 0 0.0002241 2 32682 70.089 70.089 1 0.87137 0.87291 0 9034900 4169700 4865200 22759 364 8566 8765 35722;35723 35722 LNSGGGLSEELGSAR 15 0 1 Unmodified _LNSGGGLSEELGSAR_ 0 0 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.8671 2 723.862794 1445.71104 74214.39 0.74306 0.00053787 -0.11549 -8.3597E-05 0.62757 0.00045427 723.862753039212 728.867010355779 56.775 0.40367 56.775 56.59 56.994 0 95 31 4 0 0 0 0.00022565 2 32745 72.496 72.496 1 0.67209 0.66449 0 12531000 7490400 5040900 22760 364 8566 8765 35724;35725 35725 LNSGGGLSEELGSAR 15 0 1 Unmodified _LNSGGGLSEELGSAR_ 0 0 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.8672 2 723.862794 1445.71104 71305.1 0.69509 0.00050315 0.33216 0.00024044 1.0273 0.00074359 723.862926868634 728.867064025345 67.515 0.45645 67.515 67.271 67.727 0 144 34 6 0 0 0 0.01339 1 35114 33.782 30.461 1 1.3326 1.1351 0 2825900 1317000 1508900 22761 364 8566 8765 35726 35726 LNSLAIGLR 9 0 1 Unmodified _LNSLAIGLR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.7981 2 478.798009 955.581465 87347.42 0.30887 0.00014789 -0.60932 -0.00029174 -0.30045 -0.00014385 478.797909815994 483.801995180035 79.667 0.71616 79.667 79.261 79.978 0 263 61 6 0 0 0 2.5503E-05 2 47217 113.5 63.909 1 1.6842 1.7308 0 36393000 17291000 19102000 22762 1611 8567 8766 35727;35728 35728 LNSLAIGLR 9 0 1 Unmodified _LNSLAIGLR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.802 2 478.798009 955.581465 88896.03 -0.062309 -2.9833E-05 -0.45239 -0.0002166 -0.5147 -0.00024644 478.798048910702 483.802105131291 78.426 0.71266 78.426 78.122 78.835 0 295 60 9 0 0 0 1.8757E-05 2 47526 119.29 60.31 1 1.7814 2.0045 0 46264000 18449000 27816000 22763 1611 8567 8766 35729;35730 35729 LNSLAIGLR 9 0 1 Unmodified _LNSLAIGLR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.8018 2 478.798009 955.581465 90156.64 0.35481 0.00016988 -0.52332 -0.00025057 -0.16852 -8.0685E-05 478.797856753607 483.801995492428 90.716 0.6643 90.716 90.412 91.077 0 175 38 7 0 0 0 0.055495 1 50201 36.557 18.521 1 1.595 1.3707 0 2695100 1066600 1628500 22764 1611 8567 8766 35731 35731 LNSLAIGLR 9 0 1 Unmodified _LNSLAIGLR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.8022 2 478.798009 955.581465 90408.01 0.20202 9.6726E-05 -0.57615 -0.00027586 -0.37413 -0.00017913 478.797820337983 483.801819480686 90.521 0.67275 90.521 90.245 90.917 7.6294E-06 168 39 7 0 0 0 0.0047844 1 49315 68.383 41.245 1 1.5796 1.3853 0 2524400 1013100 1511300 22765 1611 8567 8766 35732 35732 LNSPEETAFQTPK 13 1 0 Unmodified _LNSPEETAFQTPK_ 0 0 0 B4DZG6;Q9BTX1 B4DZG6 B4DZG6 NDC1 Nucleoporin NDC1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3733 2 731.364638 1460.71472 NaN NaN NaN -0.17125 -0.00012525 NaN NaN NaN NaN 58.779 0.36959 58.779 58.649 59.018 -3.8147E-06 0 0 0 0.046081 1 33340 40.589 22.277 1 NaN NaN 0 3885800 0 3885800 22766 1055 8568 8767 35733 35733 LNSPEETAFQTPK 13 1 0 Unmodified _LNSPEETAFQTPK_ 0 0 0 B4DZG6;Q9BTX1 B4DZG6 B4DZG6 NDC1 Nucleoporin NDC1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3706 2 731.364638 1460.71472 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.65 1 57.65 57.15 58.15 3.8147E-06 0 0 0 0.0038872 1 33396 62.408 37.022 1 22767 1055 8568 8767 35734 35734 LNSSDPSLIGLK 12 1 0 Unmodified _LNSSDPSLIGLK_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.3567 2 622.34826 1242.68197 80049.34 0.66066 0.00041116 0.1204 7.4932E-05 0.78106 0.00048609 622.347988894108 626.35594698903 77.361 0.43002 77.361 77.154 77.584 0 111 34 5 0 0 0 9.0593E-05 1 46817 96.342 77.562 1 1.5953 1.6296 0 11979000 4621700 7356800 22768 1901 8569 8768 35735 35735 LNSSIVEPK 9 1 0 Unmodified _LNSSIVEPK_ 0 0 0 Q00653;A0A1P8C958;D3DR86;M0R119 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.7867 2 493.779482 985.544411 88549.89 0.17974 8.8751E-05 0.26123 0.00012899 0.44097 0.00021774 493.779441876895 497.786597097247 40.144 0.36794 40.144 39.858 40.226 0 94 29 4 0 0 0 0.0042207 1 20852 69.812 40.913 1 2.9803 3.078 0 14655000 3030100 11625000 22769 1674 8570 8769 35736 35736 LNSSIVEPK 9 1 0 Unmodified _LNSSIVEPK_ 0 0 0 Q00653;A0A1P8C958;D3DR86;M0R119 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.7867 2 493.779482 985.544411 88157.88 0.21251 0.00010493 0.31743 0.00015674 0.52994 0.00026167 493.779437928762 497.786741486734 39.072 0.33024 39.072 38.857 39.187 0 80 27 4 0 0 0 0.0023856 1 20629 74.464 54.688 1 2.9929 3.0543 0 17183000 5020000 12163000 22770 1674 8570 8769 35737 35737 LNTDPMLLQFFK 12 1 0 Oxidation (M) _LNTDPM(ox)LLQFFK_ LNTDPM(1)LLQFFK LNTDPM(77.53)LLQFFK 0 1 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8875 2 741.886695 1481.75884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.94 1 118.94 118.44 119.44 7.6294E-06 0 0 0 0.0003022 1 76421 77.533 43.643 1 22771 1954 8571 8770 35738 35738 1805 LNTDPMLLQFFK 12 1 0 Oxidation (M) _LNTDPM(ox)LLQFFK_ LNTDPM(1)LLQFFK LNTDPM(103.7)LLQFFK 0 1 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.888 2 741.886695 1481.75884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.41 1 118.41 117.91 118.91 0 0 0 0 2.6449E-07 1 77865 103.7 55.26 1 22772 1954 8571 8770 35739 35739 1805 LNTGILNK 8 1 0 Unmodified _LNTGILNK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.7701 2 436.763635 871.512717 NaN NaN NaN -0.69292 -0.00030264 NaN NaN NaN NaN 45.174 1.1216 45.174 44.678 45.8 -3.8147E-06 0 0 0 0.0075432 1 24510 82.305 32.28 1 NaN NaN 0 335590000 0 335590000 22773 1470 8572 8771 35740 35740 LNTGILNK 8 1 0 Unmodified _LNTGILNK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.7711 2 436.763635 871.512717 NaN NaN NaN -0.88846 -0.00038805 NaN NaN NaN NaN 44.45 0.97953 44.45 43.987 44.966 0 0 0 0 0.0040636 1 24038 91.9 45.884 1 NaN NaN 0 543500000 0 543500000 22774 1470 8572 8771 35741 35741 LNTGILNK 8 1 0 Unmodified _LNTGILNK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.7639 2 436.763635 871.512717 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.15 1 44.15 43.65 44.65 0 0 0 0 1.4599E-17 1 24082 166.05 66.912 1 22775 1470 8572 8771 35742 35742 LNTGILNK 8 1 0 Unmodified _LNTGILNK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 436.7635 2 436.763635 871.512717 89175.25 -0.35156 -0.00015355 0.1799 7.8576E-05 -0.17165 -7.4972E-05 436.763686374678 440.770710284251 52.023 1.3403 52.023 51.552 52.892 3.8147E-06 478 108 7 0 0 0 1.88E-05 2 25643 142.36 57.097 1 1.5057 1.292 0 80759000 32348000 48411000 22776 1470 8572 8771 35743;35744 35744 LNTGILNK 8 1 0 Unmodified _LNTGILNK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 436.7635 2 436.763635 871.512717 90380.98 -0.18748 -8.1882E-05 -0.028824 -1.2589E-05 -0.2163 -9.4472E-05 436.763601834673 440.77059841784 52.212 1.4331 52.212 51.763 53.196 0 514 111 8 0 0 0 0.001447 1 25173 108.92 46.21 1 1.4438 1.2258 0 71061000 27038000 44023000 22777 1470 8572 8771 35745 35745 LNTLLQR 7 0 1 Unmodified _LNTLLQR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.268 2 429.263802 856.513051 91037.73 -0.28935 -0.00012421 -0.62888 -0.00026996 -0.91823 -0.00039416 429.263703483142 434.267393876582 45.681 1.2033 45.681 45.243 46.446 0 415 106 6 0 0 0 0.017426 1 24493 97.068 52.457 1 1.2164 1.4393 0 324590000 146450000 178150000 22778 999 8573 8772 35746 35746 LNTLLQR 7 0 1 Unmodified _LNTLLQR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 429.2634 2 429.263802 856.513051 91006.45 0.033762 1.4493E-05 0.091463 3.9262E-05 0.12523 5.3755E-05 429.263868814263 434.267765655417 44.905 0.94345 44.905 44.425 45.368 3.8147E-06 394 77 7 0 0 0 1.3763E-06 2 24576 153.15 54.733 1 1.1891 1.3842 0 424870000 198790000 226080000 22779 999 8573 8772 35747;35748 35748 LNTLLQR 7 0 1 Unmodified _LNTLLQR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 434.2676 2 429.263802 856.513051 90835.61 -0.42102 -0.00018073 0.93586 0.00040173 0.51484 0.000221 429.263961691572 434.26790741035 52.195 2.8255 52.195 51.795 54.62 0 550 223 6 0 0 0 0.028306 1 25838 72.138 32.92 1 0.72731 0.60884 0 24735000 14794000 9940600 22780 999 8573 8772 35749 35749 LNTLLQR 7 0 1 Unmodified _LNTLLQR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 434.2676 2 429.263802 856.513051 NaN NaN NaN 0.18169 7.7991E-05 NaN NaN NaN NaN 52.323 0.83663 52.323 51.94 52.776 -3.8147E-06 0 0 0 0.03697 1 25248 64.757 29.865 1 NaN NaN 0 8236100 0 8236100 22781 999 8573 8772 35750 35750 LNTQEIFDDWAR 12 0 1 Unmodified _LNTQEIFDDWAR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.3674 2 754.36243 1506.71031 NaN NaN NaN 0.87835 0.00066259 NaN NaN NaN NaN 109.33 0.33608 109.33 109.16 109.5 0 0 0 0 0.0016061 1 70135 76.143 60.252 1 NaN NaN 0 4003000 0 4003000 22782 1729 8574 8773 35751 35751 LNTTTMSNATANSSIR 16 0 1 Oxidation (M) _LNTTTM(ox)SNATANSSIR_ LNTTTM(1)SNATANSSIR LNTTTM(99.53)SNATANSSIR 0 1 0 A0A024RC67;O43663;G3V3N7 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.4099 2 849.409782 1696.80501 67100.75 0.67291 0.00057158 -0.11853 -0.00010068 0.55438 0.00047089 849.409581488644 854.414187110225 27.932 0.28294 27.932 27.796 28.079 0 81 18 6 0 0 0 9.0996E-08 2 13060 99.531 99.531 1 0.89171 0.91449 0 19277000 10386000 8891000 22783 353 8575 8774 35752;35753 35753 262 LNTTTMSNATANSSIR 16 0 1 Oxidation (M) _LNTTTM(ox)SNATANSSIR_ LNTTTM(1)SNATANSSIR LNTTTM(155.88)SNATANSSIR 0 1 0 A0A024RC67;O43663;G3V3N7 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 854.415 2 849.409782 1696.80501 66857.88 0.4187 0.00035565 -0.22876 -0.00019431 0.18995 0.00016134 849.911291228868 854.413906194127 27.383 0.23066 27.383 27.252 27.483 0 55 11 8 0 0 0 4.5034E-34 1 12660 155.88 155.88 1 0.93067 1.0098 0 27967000 14019000 13948000 22784 353 8575 8774 35754 35754 262 LNTTTMSNATANSSIR 16 0 1 Oxidation (M) _LNTTTM(ox)SNATANSSIR_ LNTTTM(1)SNATANSSIR LNTTTM(40.55)SNATANSSIR 0 1 0 A0A024RC67;O43663;G3V3N7 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.4108 2 849.409782 1696.80501 66124.43 0.45095 0.00038304 -0.12941 -0.00010992 0.32154 0.00027312 849.409765640536 854.413757975374 32.08 0.25428 32.08 31.958 32.212 0 75 13 8 0 0 0 0.0012205 1 13709 40.552 40.552 1 0.82796 0.7025 0 5137900 2981000 2156900 22785 353 8575 8774 35755 35755 262 LNVCVSK 7 1 0 Unmodified _LNVCVSK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0;H7C464;B7WPG3;C9IYN3;A8K894;D6W592;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9 B2R959;B7WPG3 B2R959 HNRNPL;HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L;Heterogeneous nuclear ribonucleoprotein L-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.2309 2 410.223288 818.432024 92094.16 0.34612 0.00014199 1.1836 0.00048553 1.5297 0.00062752 410.223671759043 414.230514614871 31.069 0.25658 31.069 30.94 31.196 0 71 23 7 0 0 0 0.026804 1 15299 79.451 34.84 1 1.4242 1.5373 0 41961000 16145000 25816000 22786 865;586 8576 8775 35756 35756 LNVCVSK 7 1 0 Unmodified _LNVCVSK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0;H7C464;B7WPG3;C9IYN3;A8K894;D6W592;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9 B2R959;B7WPG3 B2R959 HNRNPL;HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L;Heterogeneous nuclear ribonucleoprotein L-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.2299 2 410.223288 818.432024 91907.63 -0.13899 -5.7015E-05 0.64055 0.00026277 0.50156 0.00020575 410.223302941097 414.230600717464 30.482 0.29674 30.482 30.397 30.694 0 52 25 4 0 0 0 0.026719 1 14953 77.058 30.632 1 1.3203 1.3272 0 27372000 11930000 15442000 22787 865;586 8576 8775 35757 35757 LNVDEAFEQLVR 12 0 1 Unmodified _LNVDEAFEQLVR_ 0 0 0 A0A024QZF2;P10301 A0A024QZF2 A0A024QZF2 RRAS Ras-related protein R-Ras ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.3826 2 716.875173 1431.73579 NaN NaN NaN 0.60343 0.00043258 NaN NaN NaN NaN 117.76 0.2905 117.76 117.65 117.94 0 0 0 0 0.025117 1 75542 49.35 35.144 1 NaN NaN 0 1995700 0 1995700 22788 20 8577 8776 35758 35758 LNVDFALIHK 10 1 0 Unmodified _LNVDFALIHK_ 0 0 0 Q53FW2;P60891;B1ALA9 Q53FW2 Q53FW2 PRPS1 Ribose-phosphate pyrophosphokinase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.2317 3 390.560758 1168.66044 NaN NaN NaN 0.20552 8.0269E-05 NaN NaN NaN NaN 88.488 0.56573 88.488 88.078 88.643 0 0 0 0 0.046565 1 53196 32.523 17.857 1 NaN NaN 0 7050900 0 7050900 22789 1626 8578 8777 35759 35759 LNVDFALIHK 10 1 0 Unmodified _LNVDFALIHK_ 0 0 0 Q53FW2;P60891;B1ALA9 Q53FW2 Q53FW2 PRPS1 Ribose-phosphate pyrophosphokinase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.3461 2 585.337498 1168.66044 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.524 1 88.524 88.024 89.024 0 0 0 0 0.031825 1 53370 49.85 8.421 1 22790 1626 8578 8777 35760 35760 LNVSQDDVLYALK 13 1 0 Unmodified _LNVSQDDVLYALK_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.4061 2 739.398481 1476.78241 71109.91 1.1388 0.00084201 -0.80122 -0.00059242 0.33756 0.00024959 739.397869710014 743.405149012485 102.64 0.59396 102.64 102.24 102.84 0 133 47 4 0 0 0 0.00030291 1 64761 65.5 52.147 1 1.0398 1.0426 0 15841000 7057900 8783400 22791 1103 8579 8778 35761 35761 LNVSQDDVLYALKDE 15 1 0 Unmodified _LNVSQDDVLYALKDE_ 0 0 1 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 865.4405 2 861.433249 1720.85195 NaN NaN NaN 0.19035 0.00016397 NaN NaN NaN NaN 118.68 0.3689 118.68 118.46 118.83 0 0 0 0 0.040464 1 69229 61.212 39.166 1 NaN NaN 0 3293100 0 3293100 22792 1103 8580 8779 35762 35762 LNVVAFLNELPK 12 1 0 Unmodified _LNVVAFLNELPK_ 0 0 0 Q9UBU9;E9PIN3 Q9UBU9 Q9UBU9 NXF1 Nuclear RNA export factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.8996 2 678.89792 1355.78129 NaN NaN NaN -0.24676 -0.00016752 NaN NaN NaN NaN 130.52 0.48944 130.52 130.38 130.86 0 0 0 0 0.022576 1 85067 50.284 32.419 1 NaN NaN 0 1450100 1450100 0 22793 2099 8581 8780 35763 35763 LNVVAFLNELPK 12 1 0 Unmodified _LNVVAFLNELPK_ 0 0 0 Q9UBU9;E9PIN3 Q9UBU9 Q9UBU9 NXF1 Nuclear RNA export factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.9054 2 678.89792 1355.78129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.42 1 130.42 129.92 130.92 0 0 0 0 0.0081238 1 85039 59.426 42.195 1 22794 2099 8581 8780 35764 35764 LNVWDLSK 8 1 0 Unmodified _LNVWDLSK_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02;Q5JNZ6 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.7741 2 487.768917 973.523281 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.776 1 87.776 87.276 88.276 0 0 0 0 0.025129 1 52943 65.246 28.545 1 22795 1771;1695 8582 8781 35765 35765 LNVWDLSK 8 1 0 Unmodified _LNVWDLSK_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02;Q5JNZ6 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.7697 2 487.768917 973.523281 NaN NaN NaN -2.2823 -0.0011132 NaN NaN NaN NaN 86.918 0.14585 86.918 86.873 87.019 0 0 0 0 0.015059 1 53552 69.423 44.501 1 NaN NaN 0 4261200 4261200 0 22796 1771;1695 8582 8781 35766 35766 LNWLSVDFNNWK 12 1 0 Unmodified _LNWLSVDFNNWK_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185;B4DDC6 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.3931 2 768.385708 1534.75686 NaN NaN NaN -0.46655 -0.00035849 NaN NaN NaN NaN 122.47 0.54775 122.47 122.23 122.78 7.6294E-06 0 0 0 4.5337E-05 1 79186 95.573 80.307 1 NaN NaN 0 16549000 0 16549000 22797 323 8583 8782 35767 35767 LNWLSVDFNNWK 12 1 0 Unmodified _LNWLSVDFNNWK_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185;B4DDC6 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 768.3876 2 768.385708 1534.75686 68674.44 1.2571 0.00096596 0.33216 0.00025523 1.5893 0.0012212 768.384959692898 772.393026620662 134.38 0.21254 134.38 134.26 134.48 0 34 9 6 0 0 0 0.032304 1 82056 35.541 29.438 1 2.7306 2.1264 0 12333000 3565300 8767400 22798 323 8583 8782 35768 35768 LNYEENKEESLLEK 14 2 0 Unmodified _LNYEENKEESLLEK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.4472 2 869.430706 1736.84686 66020.55 0.26748 0.00023256 0.40643 0.00035336 0.67391 0.00058592 869.430510163889 877.445695749413 52.915 0.37151 52.915 52.75 53.122 -3.8147E-06 90 27 7 0 0 0 0.00059461 2 29436 90.653 90.653 1 0.9015 1.074 0 21734000 11685000 10049000 22799 69 8584 8783 35769;35770 35769 LNYEENKEESLLEK 14 2 0 Unmodified _LNYEENKEESLLEK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.2987 3 579.95623 1736.84686 78853.77 0.16785 9.7346E-05 0.047194 2.7371E-05 0.21505 0.00012472 580.290511994978 585.298925936993 52.888 0.55231 52.888 52.693 53.245 0 232 41 8 0 0 0 2.421E-21 1 29496 141.46 141.46 1 0.85348 1.0074 0 80335000 39859000 40476000 22800 69 8584 8783 35771 35771 LNYEENKEESLLEK 14 2 0 Unmodified _LNYEENKEESLLEK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.9564 3 579.95623 1736.84686 78231.73 0.41102 0.00023837 0.63668 0.00036924 1.0477 0.00060762 579.956073602796 585.301324917017 51.743 0.84515 51.743 51.446 52.291 0 296 66 8 0 0 0 8.0611E-15 2 29369 119.32 119.32 1 0.90416 1.0495 0 93778000 51499000 42279000 22801 69 8584 8783 35772;35773 35773 LNYEENKEESLLEK 14 2 0 Unmodified _LNYEENKEESLLEK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.4453 2 869.430706 1736.84686 67111.06 0.33679 0.00029282 0.04841 4.2089E-05 0.3852 0.00033491 869.430820073882 877.946378757919 51.742 0.39528 51.742 51.555 51.951 -3.8147E-06 99 33 5 0 0 0 0.00065403 2 29390 90.614 90.614 1 0.81177 0.93863 0 35813000 18766000 17047000 22802 69 8584 8783 35774;35775 35775 LNYEENKEESLLEK 14 2 0 Unmodified _LNYEENKEESLLEK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.291 3 579.95623 1736.84686 78184.2 0.36332 0.00021071 0.53569 0.00031068 0.89901 0.00052139 580.29211947461 585.299128234467 62.532 1.2905 62.532 61.678 62.968 3.8147E-06 371 106 9 0 0 0 0.00095822 1 32181 42.958 42.958 1 1.5233 1.2954 0 32946000 12098000 20848000 22803 69 8584 8783 35776 35776 LNYEHDNISLK 11 1 0 Unmodified _LNYEHDNISLK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.3407 2 673.340966 1344.66738 75101.27 0.72424 0.00048766 -0.26575 -0.00017894 0.45849 0.00030872 673.340743120935 677.347749461137 47.926 0.35289 47.926 47.763 48.116 -3.8147E-06 96 31 5 0 0 0 7.1228E-10 1 26082 126.76 96.511 1 0.76447 0.85482 0 63519000 34346000 29173000 22804 1955 8585 8784 35777 35777 LNYEHDNISLK 11 1 0 Unmodified _LNYEHDNISLK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.3483 2 673.340966 1344.66738 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.834 1 47.834 47.334 48.334 0 0 0 0 8.8991E-07 1 25991 105.2 70.671 1 22805 1955 8585 8784 35778 35778 LNYEHDNISLK 11 1 0 Unmodified _LNYEHDNISLK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3398 2 673.340966 1344.66738 74817.94 0.71129 0.00047894 0.53243 0.00035851 1.2437 0.00083745 673.340895221838 677.34824527665 46.398 0.51182 46.398 46.19 46.702 0 184 39 8 0 0 0 6.4191E-08 2 25541 115.18 86.448 1 0.95632 1.0712 0 81741000 44139000 37602000 22806 1955 8585 8784 35779;35780 35780 LNYEHDNISLK 11 1 0 Unmodified _LNYEHDNISLK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.3411 2 673.340966 1344.66738 74275.05 0.6063 0.00040825 0.11403 7.6781E-05 0.72033 0.00048503 673.341428593894 677.347946928047 55.597 0.90079 55.597 55.18 56.081 -3.8147E-06 184 57 7 0 0 0 5.9243E-05 2 27878 98.898 69.728 1 1.1302 0.90627 0 8268100 3981400 4286800 22807 1955 8585 8784 35781;35782 35782 LNYEHDNISLK 11 1 0 Unmodified _LNYEHDNISLK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 451.9012 3 449.229736 1344.66738 88190.16 0.14292 6.4204E-05 -0.020427 -9.1763E-06 0.12249 5.5027E-05 449.229547067033 451.901107316622 55.579 0.70362 55.579 55.261 55.964 0 209 43 8 0 0 0 0.026945 1 27852 28.361 12.821 1 1.059 0.82413 0 15534000 7118800 8415500 22808 1955 8585 8784 35783 35783 LNYEHDNISLK 11 1 0 Unmodified _LNYEHDNISLK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.3483 2 673.340966 1344.66738 74201.45 0.54778 0.00036884 0.031389 2.1136E-05 0.57917 0.00038998 673.341318861877 677.347774045548 55.949 0.70179 55.949 55.579 56.281 0 211 45 8 0 0 0 0.0048766 1 27505 57.225 42.559 1 1.1895 0.97782 0 9856200 4357800 5498400 22809 1955 8585 8784 35784 35784 LNYLDPR 7 0 1 Unmodified _LNYLDPR_ 0 0 0 P11387;B9EG90;Q9BVT2;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;B4E061;Q8TBP3;H0YAR3 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.7438 2 445.74016 889.465767 NaN NaN NaN -0.01895 -8.4467E-06 NaN NaN NaN NaN 53.059 1.2744 53.059 52.58 53.855 0 0 0 0 0.030367 1 29533 85.265 35.675 1 NaN NaN 0 192200000 0 192200000 22810 1470 8586 8785 35785 35785 LNYLDPR 7 0 1 Unmodified _LNYLDPR_ 0 0 0 P11387;B9EG90;Q9BVT2;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;B4E061;Q8TBP3;H0YAR3 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.7402 2 445.74016 889.465767 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.848 1 52.848 52.348 53.348 0 0 0 0 0.038467 1 29455 69.998 35.174 1 22811 1470 8586 8785 35786 35786 LNYLLR 6 0 1 Unmodified _LNYLLR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 396.2426 2 396.242338 790.470124 NaN NaN NaN 0.19762 7.8306E-05 NaN NaN NaN NaN 64.306 0.77888 64.306 64.034 64.813 0 0 0 0 0.00019854 1 36864 129.52 25.732 1 NaN NaN 0 19819000 19819000 0 22812 1479 8587 8786 35787 35787 LNYLLR 6 0 1 Unmodified _LNYLLR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 396.2421 2 396.242338 790.470124 95294.26 0.24604 9.7492E-05 -0.069442 -2.7516E-05 0.1766 6.9976E-05 396.242224535319 401.246251578037 73.61 0.89995 73.61 73.215 74.114 0 256 65 6 0 0 0 0.058888 1 38871 81.716 21.312 1 0.47099 0.40062 0 9082800 6193300 2889500 22813 1479 8587 8786 35788 35788 LNYLLR 6 0 1 Unmodified _LNYLLR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 396.2422 2 396.242338 790.470124 96010.16 -0.011838 -4.6908E-06 0.039352 1.5593E-05 0.027514 1.0902E-05 396.242267345221 401.24629664828 73.904 1.0311 73.904 73.542 74.573 0 238 71 6 0 0 0 0.058999 1 38276 69.39 23.039 1 0.45576 0.3752 0 8464100 5977700 2486400 22814 1479 8587 8786 35789 35789 LNYTRPGLPTLNPQLLEAWK 20 1 1 Unmodified _LNYTRPGLPTLNPQLLEAWK_ 0 0 1 Q96KM6 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 782.1066 3 775.430227 2323.26885 69146.75 0.7391 0.00057312 0.19834 0.0001538 0.93744 0.00072692 776.099370762797 781.772168806518 130.98 0.34631 130.98 130.82 131.17 0 78 14 7 0 0 0 0.0015047 1 79444 31.767 28.43 1 1.5108 1.243 0 4371600 1938200 2433500 22815 1976 8588 8787 35790 35790 LPAAGVGDMVMATVK 15 1 0 2 Oxidation (M) _LPAAGVGDM(ox)VM(ox)ATVK_ LPAAGVGDM(1)VM(1)ATVK LPAAGVGDM(80.32)VM(80.32)ATVK 0 2 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.3887 2 746.380919 1490.74729 67173.44 0.43282 0.00032305 -0.38846 -0.00028994 0.044357 3.3107E-05 746.380836548165 750.388062939219 64.689 1.3218 64.689 64.231 65.553 0 705 118 10 0 0 0 0.00016181 2 37434 80.318 70.01 1 1.8162 2.1638 0 660550000 238140000 422410000 22816 84 8589 8788 35791;35792 35791 81;82 LPAAGVGDMVMATVK 15 1 0 2 Oxidation (M) _LPAAGVGDM(ox)VM(ox)ATVK_ LPAAGVGDM(1)VM(1)ATVK LPAAGVGDM(48.44)VM(48.44)ATVK 0 2 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.3889 2 746.380919 1490.74729 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.283 1 64.283 63.783 64.783 -7.6294E-06 0 0 0 0.0076565 1 36933 48.44 30.631 1 22817 84 8589 8788 35793 35793 81;82 LPAAGVGDMVMATVK 15 1 0 2 Oxidation (M) _LPAAGVGDM(ox)VM(ox)ATVK_ LPAAGVGDM(1)VM(1)ATVK LPAAGVGDM(205.49)VM(205.49)ATVK 0 2 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.3859 2 746.380919 1490.74729 67719.92 0.5625 0.00041984 -0.24242 -0.00018094 0.32008 0.0002389 746.381021504842 750.388168157662 63.571 1.2167 63.571 62.975 64.192 0 660 107 12 0 0 0 1.4743E-70 2 37345 205.49 177.77 1 1.7776 2.0952 0 627760000 234480000 393280000 22818 84 8589 8788 35794;35795 35795 81;82 LPAAGVGDMVMATVK 15 1 0 2 Oxidation (M) _LPAAGVGDM(ox)VM(ox)ATVK_ LPAAGVGDM(1)VM(1)ATVK LPAAGVGDM(67.55)VM(67.55)ATVK 0 2 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.3885 2 746.380919 1490.74729 67782.06 0.85556 0.00063857 -0.71918 -0.00053678 0.13637 0.00010179 746.380583543178 750.387787362231 74.308 0.96149 74.308 73.898 74.86 0 455 65 11 0 0 0 0.00026566 2 39263 74.698 74.698 1 0.88207 0.73592 0 48891000 25759000 23132000 22819 84 8589 8788 35796;35797 35796 81;82 LPAAGVGDMVMATVK 15 1 0 2 Oxidation (M) _LPAAGVGDM(ox)VM(ox)ATVK_ LPAAGVGDM(1)VM(1)ATVK LPAAGVGDM(75.82)VM(75.82)ATVK 0 2 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 750.3896 2 746.380919 1490.74729 67429.81 0.4684 0.0003496 -0.31555 -0.00023552 0.15285 0.00011409 746.380894000518 750.38803873752 74.708 0.90831 74.708 74.354 75.262 0 347 54 10 0 0 0 0.00025104 2 38726 75.819 75.819 1 0.84128 0.70707 0 50292000 26088000 24204000 22820 84 8589 8788 35798;35799 35799 81;82 LPAAGVGDMVMATVK 15 1 0 Oxidation (M) _LPAAGVGDM(ox)VMATVK_ LPAAGVGDM(0.711)VM(0.289)ATVK LPAAGVGDM(3.91)VM(-3.91)ATVK 0 1 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.8862 2 738.383462 1474.75237 72303.48 0.64965 0.00047969 -0.48337 -0.00035691 0.16628 0.00012278 738.382971490431 742.38989679281 83.22 0.54243 83.22 82.935 83.477 0 184 46 6 0 0 0 0.00010968 3 49800 73.632 65.397 2 0.62826 0.66797 0 15861000 8659800 7201000 22821 84 8589 8789 35800;35801;35802 35800 81;82 LPAAGVGDMVMATVK 15 1 0 Oxidation (M) _LPAAGVGDM(ox)VMATVK_ LPAAGVGDM(0.923)VM(0.077)ATVK LPAAGVGDM(10.77)VM(-10.77)ATVK 0 1 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 738.3835 2 738.383462 1474.75237 69252.5 0.85637 0.00063233 -0.61124 -0.00045133 0.24513 0.000181 738.38333011622 742.389880818435 95.628 0.78218 95.628 95.18 95.962 -7.6294E-06 301 55 7 0 0 0 9.0251E-05 1 53659 77.26 77.26 2 1.5541 1.2127 0 12068000 5188500 6879700 22822 84 8589 8789 35803 35803 81;82 LPAAGVGDMVMATVK 15 1 0 Oxidation (M) _LPAAGVGDMVM(ox)ATVK_ LPAAGVGDM(0.107)VM(0.893)ATVK LPAAGVGDM(-9.2)VM(9.2)ATVK 0 1 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.3917 2 738.383462 1474.75237 71889.11 0.86112 0.00063584 -0.14174 -0.00010466 0.71938 0.00053118 738.383228148042 742.390339609145 116.11 0.39118 116.11 115.88 116.27 0 56 16 5 0 0 0 0.0003527 1 68146 51.286 51.286 2 1.8597 1.4975 0 2814900 1066200 1748700 22823 84 8589 8789 35804 35804 81;82 LPAAGVGDMVMATVK 15 1 0 Oxidation (M) _LPAAGVGDMVM(ox)ATVK_ LPAAGVGDM(0.149)VM(0.851)ATVK LPAAGVGDM(-7.57)VM(7.57)ATVK 0 1 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.3912 2 738.383462 1474.75237 69656.13 0.59389 0.00043852 0.36403 0.00026879 0.95792 0.00070731 738.383471414931 742.390603921594 101.19 0.59261 101.19 100.92 101.51 -7.6294E-06 175 35 7 0 0 0 0.00010724 1 56380 65.842 65.842 2 1.4661 1.1947 0 7549800 3064400 4485400 22824 84 8589 8789 35805 35805 81;82 LPAAGVGDMVMATVK 15 1 0 Unmodified _LPAAGVGDMVMATVK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 734.3943 2 730.386005 1458.75746 69531.19 0.80147 0.00058538 -2.1994 -0.0016064 -1.3979 -0.001021 730.385945831499 734.393040169782 116.07 1.5826 116.07 115.62 117.2 0 213 65 8 0 0 0 2.3536E-16 2 68118 176.87 176.87 1 1.8247 1.4492 0 19081000 5929000 13152000 22825 84 8589 8790 35806;35807 35806 LPACVVDCGTGYTK 14 1 0 Unmodified _LPACVVDCGTGYTK_ 0 0 0 A0A024RAI1;P61158;F8WEW2;F8WE84 A0A024RAI1 A0A024RAI1 ACTR3 Actin-related protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.8698 2 770.860351 1539.70615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.296 1 60.296 59.796 60.796 -3.8147E-06 0 0 0 0.035269 1 34416 42.425 24.561 1 22826 304 8590 8791 35808 35808 LPACVVDCGTGYTK 14 1 0 Unmodified _LPACVVDCGTGYTK_ 0 0 0 A0A024RAI1;P61158;F8WEW2;F8WE84 A0A024RAI1 A0A024RAI1 ACTR3 Actin-related protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.8697 2 770.860351 1539.70615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.378 1 60.378 59.878 60.878 0 0 0 0 0.011753 1 34457 50.149 41.42 1 22827 304 8590 8791 35809 35809 LPAIALDLLR 10 0 1 Unmodified _LPAIALDLLR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.8547 2 547.850242 1093.68593 82478.52 0.5424 0.00029716 -0.01732 -9.4886E-06 0.52508 0.00028767 547.850117525086 552.854294318801 122.68 0.64604 122.68 122.42 123.06 7.6294E-06 271 47 8 0 0 0 0.00016057 2 79308 95.358 23.666 1 0.86699 0.95797 0 56737000 28353000 28384000 22828 1997 8591 8792 35810;35811 35811 LPAIALDLLR 10 0 1 Unmodified _LPAIALDLLR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.8549 2 547.850242 1093.68593 82255.82 0.73259 0.00040135 -0.093745 -5.1358E-05 0.63884 0.00034999 547.85011244221 552.854218868607 122.11 0.6651 122.11 121.81 122.47 -7.6294E-06 263 47 8 0 0 0 8.4089E-06 2 80787 106.42 25.985 1 0.87792 1.0196 0 59136000 32792000 26343000 22829 1997 8591 8792 35812;35813 35813 LPAIALDLLR 10 0 1 Unmodified _LPAIALDLLR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.8506 2 547.850242 1093.68593 83226.74 0.67012 0.00036712 0.3704 0.00020292 1.0405 0.00057004 547.85031382406 552.854442606242 134.57 0.22337 134.57 134.48 134.7 0 25 6 7 0 0 0 0.0010607 2 82246 76.827 18.867 1 1.0061 0.83998 0 23459000 11813000 11645000 22830 1997 8591 8792 35814;35815 35815 LPAIALDLLR 10 0 1 Unmodified _LPAIALDLLR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.8502 2 547.850242 1093.68593 82420.98 0.60044 0.00032895 0.055945 3.065E-05 0.65639 0.0003596 547.850284593222 552.854263624226 134.47 0.254 134.47 134.34 134.59 0 33 8 6 0 0 0 0.00050835 2 81235 85.731 26.381 1 0.98425 0.84182 0 20526000 10470000 10056000 22831 1997 8591 8792 35816;35817 35816 LPATIAR 7 0 1 Unmodified _LPATIAR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 376.2389 2 371.234513 740.454474 99758.52 -0.02645 -9.8192E-06 0.27434 0.00010184 0.24789 9.2025E-05 371.234461636073 376.238556750445 33.152 1.1154 33.152 32.573 33.688 0 357 98 6 0 0 0 0.023524 2 16624 90.986 36.221 1 0.73802 0.84893 0 75435000 43363000 32072000 22832 515 8592 8793 35818;35819 35818 LPATIAR 7 0 1 Unmodified _LPATIAR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 376.2386 2 371.234513 740.454474 97510.76 0.12694 4.7126E-05 -0.12382 -4.5968E-05 0.0031187 1.1578E-06 371.234321157664 376.238469145588 38.003 1.129 38.003 37.333 38.462 0 311 88 6 0 0 0 0.053301 1 17183 53.554 13.793 1 1.8121 1.5596 0 7186400 2647200 4539300 22833 515 8592 8793 35820 35820 LPAVSSVACGASVGYAVTK 19 1 0 Unmodified _LPAVSSVACGASVGYAVTK_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.9885 2 918.979844 1835.94513 63224.91 1.0915 0.0010031 0.055789 5.1269E-05 1.1473 0.0010544 919.481325801245 922.987131405768 90.91 0.59437 90.91 90.603 91.197 0 287 49 7 0 0 0 4.3858E-08 1 54838 91.441 91.441 1 0.73772 0.8177 0 58724000 34473000 24251000 22834 550 8593 8794 35821 35821 LPAVSSVACGASVGYAVTK 19 1 0 Unmodified _LPAVSSVACGASVGYAVTK_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.4823 2 918.979844 1835.94513 63651.88 0.76245 0.00070067 -0.15534 -0.00014275 0.60711 0.00055792 918.979694840042 923.488475720069 90.231 0.60448 90.231 89.914 90.519 0 352 54 8 0 0 0 1.8686E-12 2 55640 109.99 109.99 1 0.72716 0.8165 0 75382000 44017000 31366000 22835 550 8593 8794 35822;35823 35823 LPAVSSVACGASVGYAVTK 19 1 0 Unmodified _LPAVSSVACGASVGYAVTK_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 922.9874 2 918.979844 1835.94513 63359 0.55227 0.00050753 -0.13766 -0.0001265 0.41462 0.00038102 919.481283710811 922.986997446515 104.46 0.74493 104.46 104.14 104.89 0 336 46 10 0 0 0 1.4448E-16 2 59401 114.21 114.21 1 0.96352 0.78383 0 30202000 16338000 13864000 22836 550 8593 8794 35824;35825 35824 LPAVSSVACGASVGYAVTK 19 1 0 Unmodified _LPAVSSVACGASVGYAVTK_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 922.9878 2 918.979844 1835.94513 63537.19 0.29209 0.00026842 0.085622 7.8685E-05 0.37771 0.00034711 919.481486265666 922.987153724838 104.19 0.77986 104.19 103.93 104.71 -7.6294E-06 347 48 11 0 0 0 4.3339E-23 2 58403 135.72 135.72 1 0.99761 0.81307 0 25739000 13458000 12280000 22837 550 8593 8794 35826;35827 35827 LPAVVTADLR 10 0 1 Unmodified _LPAVVTADLR_ 0 0 0 P38117;M0QY67 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.8206 2 527.816399 1053.61824 82566.93 0.61168 0.00032286 -0.0023508 -1.2408E-06 0.60933 0.00032162 527.816586523555 532.820397620206 82.411 0.59009 82.411 82.036 82.626 0 231 50 7 0 0 0 3.7286E-09 2 49100 125.16 14.851 1 4.0174 4.4536 0 65751000 11219000 54532000 22838 1551 8594 8795 35828;35829 35829 LPAVVTADLR 10 0 1 Unmodified _LPAVVTADLR_ 0 0 0 P38117;M0QY67 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.8205 2 527.816399 1053.61824 82467.99 0.571 0.00030138 -0.097464 -5.1443E-05 0.47354 0.00024994 527.816506716313 532.820317395657 81.371 0.62801 81.371 80.933 81.561 0 211 53 5 0 0 0 4.8926E-08 2 49529 116.05 20.141 1 3.9923 4.636 0 64016000 14901000 49116000 22839 1551 8594 8795 35830;35831 35830 LPDAHSDYAR 10 0 1 Unmodified _LPDAHSDYAR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.7772 2 572.772719 1143.53089 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.8 1 21.8 21.3 22.3 1.9073E-06 0 0 0 0.035435 1 7883 48.602 31.825 1 22840 571 8595 8796 35832 35832 LPDDQIPK 8 1 0 Unmodified _LPDDQIPK_ 0 0 0 Q01813;Q8WTZ9;O14943;B1APP6 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2603 2 463.2531 924.491647 87329.24 0.44592 0.00020657 -1.3127 -0.0006081 -0.86674 -0.00040152 463.25202092519 467.259750879922 41.081 0.77446 41.081 40.58 41.355 0 168 60 4 0 0 0 0.039273 1 21925 47.657 36.947 1 1.5126 1.5711 0 33583000 14594000 18989000 22841 1677 8596 8797 35833 35833 LPDFSYCILER 11 0 1 Unmodified _LPDFSYCILER_ 0 0 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.8533 2 706.84757 1411.68059 72298.1 0.84814 0.00059951 -0.11132 -7.8684E-05 0.73682 0.00052082 707.348801239792 712.353216286361 110.05 0.4688 110.05 109.83 110.3 7.6294E-06 66 31 4 0 0 0 0.00098444 1 69051 70.977 59.487 1 0.53113 0.53263 0 16171000 7916800 8253800 22842 1699 8597 8798 35834 35834 LPDFSYCILER 11 0 1 Unmodified _LPDFSYCILER_ 0 0 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.8471 2 706.84757 1411.68059 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.98 1 109.98 109.48 110.48 0 0 0 0 0.019486 1 68968 53.751 41.704 1 22843 1699 8597 8798 35835 35835 LPDFSYCILER 11 0 1 Unmodified _LPDFSYCILER_ 0 0 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.3528 2 706.84757 1411.68059 74401.62 0.63651 0.00044991 0.12032 8.5049E-05 0.75683 0.00053496 707.349202203769 711.852327860017 109.44 0.42989 109.44 109.24 109.67 0 101 28 5 0 0 0 0.0025884 2 70252 61.353 60.434 1 0.59201 0.58523 0 15165000 8275000 6890100 22844 1699 8597 8798 35836;35837 35837 LPDFSYCILER 11 0 1 Unmodified _LPDFSYCILER_ 0 0 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.8524 2 706.84757 1411.68059 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.87 1 120.87 120.37 121.37 0 0 0 0 0.0081328 1 70935 61.353 26.129 1 22845 1699 8597 8798 35838 35838 LPDIFEAQIAGLR 13 0 1 Unmodified _LPDIFEAQIAGLR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.9047 2 721.903734 1441.79291 71456.75 0.8282 0.00059788 0.40885 0.00029515 1.237 0.00089303 721.904206205815 726.907985875302 119.82 1.0052 119.82 119.49 120.5 7.6294E-06 401 68 10 0 0 0 3.2847E-19 2 77021 147.74 147.74 1 0.91478 1.0526 0 145830000 72713000 73122000 + 22846 1171;1158 8598 8799 35839;35840 35840 LPDIFEAQIAGLR 13 0 1 Unmodified _LPDIFEAQIAGLR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.9045 2 721.903734 1441.79291 71593.34 0.92854 0.00067032 0.28942 0.00020894 1.218 0.00087925 721.904012009624 726.907860512254 119.28 0.96541 119.28 119.01 119.97 0 412 68 10 0 0 0 1.4314E-18 2 78495 138.25 138.25 1 0.93766 1.0809 0 227950000 114600000 113350000 + 22847 1171;1158 8598 8799 35841;35842 35842 LPDIFEAQIAGLR 13 0 1 Unmodified _LPDIFEAQIAGLR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.908 2 721.903734 1441.79291 71795.71 1.0448 0.00075426 -0.20346 -0.00014688 0.84136 0.00060738 721.903497467913 726.907690116318 132.1 0.94131 132.1 131.77 132.71 0 254 43 10 0 0 0 8.0557E-06 2 80175 102.52 102.52 1 0.9751 0.82381 0 29868000 15256000 14612000 + 22848 1171;1158 8598 8799 35843;35844 35844 LPDIFEAQIAGLR 13 0 1 Unmodified _LPDIFEAQIAGLR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 726.9084 2 721.903734 1441.79291 72284.67 1.1514 0.00083118 0.33513 0.00024193 1.4865 0.0010731 721.90389782128 726.908095351638 131.89 0.89288 131.89 131.56 132.46 0 203 36 9 0 0 0 9.6856E-14 2 79086 133.81 133.81 1 1.0167 0.88722 0 65657000 32239000 33418000 + 22849 1171;1158 8598 8799 35845;35846 35845 LPDMLNAEIVLGNVQNAK 18 1 0 Oxidation (M) _LPDM(ox)LNAEIVLGNVQNAK_ LPDM(1)LNAEIVLGNVQNAK LPDM(100.19)LNAEIVLGNVQNAK 0 1 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.5195 2 978.016957 1954.01936 62645.89 0.55356 0.00054139 0.0075937 7.4268E-06 0.56116 0.00054882 978.518172053993 982.025227539697 111.03 0.49234 111.03 110.7 111.19 7.6294E-06 126 31 7 0 0 0 7.9552E-12 1 69758 100.19 100.19 1 1.3531 1.3267 0 22571000 10272000 12299000 22850 1411 8599 8800 35847 35847 1093 LPDMLNAEIVLGNVQNAK 18 1 0 Oxidation (M) _LPDM(ox)LNAEIVLGNVQNAK_ LPDM(1)LNAEIVLGNVQNAK LPDM(109.6)LNAEIVLGNVQNAK 0 1 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 982.5267 2 978.016957 1954.01936 62671.57 0.41423 0.00040513 -0.57667 -0.000564 -0.16244 -0.00015887 978.518629958843 982.525945703831 110.52 0.55989 110.52 110.16 110.72 0 176 39 7 0 0 0 1.9644E-12 2 71093 109.6 109.6 1 1.4407 1.5533 0 22669000 8839000 13830000 22851 1411 8599 8800 35848;35849 35849 1093 LPDNYTQDTWR 11 0 1 Unmodified _LPDNYTQDTWR_ 0 0 0 Q13619;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.8322 2 704.828223 1407.64189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.62 1 62.62 62.12 63.12 -3.8147E-06 0 0 0 0.045501 1 35952 44.024 19.248 1 22852 1718 8600 8801 35850 35850 LPDNYTQDTWR 11 0 1 Unmodified _LPDNYTQDTWR_ 0 0 0 Q13619;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.8284 2 704.828223 1407.64189 74665.91 0.68368 0.00048187 -0.081737 -5.7611E-05 0.60194 0.00042426 704.828105188401 709.832423701578 61.641 0.64122 61.641 61.275 61.916 3.8147E-06 183 59 4 0 0 0 0.0049191 1 36069 57.149 45.998 1 0.49055 0.49969 0 20577000 12867000 7710100 22853 1718 8600 8801 35851 35851 LPDNYTQDTWR 11 0 1 Unmodified _LPDNYTQDTWR_ 0 0 0 Q13619;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.8323 2 704.828223 1407.64189 72792.09 0.59131 0.00041678 -0.12542 -8.8398E-05 0.4659 0.00032838 704.828074000699 709.83253524055 72.356 0.70287 72.356 72.098 72.801 0 219 53 6 0 0 0 0.0047068 2 38146 57.532 49.311 1 0.84531 0.7196 0 5431300 2659300 2772000 22854 1718 8600 8801 35852;35853 35852 LPDNYTQDTWR 11 0 1 Unmodified _LPDNYTQDTWR_ 0 0 0 Q13619;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.833 2 704.828223 1407.64189 73279.39 0.44554 0.00031403 0.21158 0.00014913 0.65712 0.00046316 704.82811477319 709.832628278227 72.961 0.61563 72.961 72.688 73.303 0 196 48 5 0 0 0 0.011605 2 37701 48.284 40.064 1 0.83787 0.69515 0 5337100 2907300 2429900 22855 1718 8600 8801 35854;35855 35854 LPEAAFLAR 9 0 1 Unmodified _LPEAAFLAR_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.2892 2 494.284734 986.554916 88342.61 0.31852 0.00015744 0.079239 3.9167E-05 0.39776 0.00019661 494.284699852386 499.28884526137 80.969 0.54922 80.969 80.724 81.273 0 147 45 4 0 0 0 0.021489 1 48162 49.442 23.991 1 1.6861 1.7039 0 15408000 5421500 9986600 22856 1545 8601 8802 35856 35856 LPEAAFLAR 9 0 1 Unmodified _LPEAAFLAR_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.2845 2 494.284734 986.554916 87938.95 0.38027 0.00018796 0.23244 0.00011489 0.61271 0.00030285 494.284661368153 499.289026416258 79.882 0.51981 79.882 79.615 80.135 0 136 40 4 0 0 0 0.0016071 1 48539 83.206 41.704 1 1.5642 1.5651 0 17032000 7148300 9884000 22857 1545 8601 8802 35857 35857 LPEASQSPLVLK 12 1 0 Unmodified _LPEASQSPLVLK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q9BRL8;F8W9Y9 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3748 2 641.374278 1280.734 78256.16 0.49577 0.00031797 -0.12282 -7.8774E-05 0.37295 0.0002392 641.37450685461 645.380706156994 78.013 0.50885 78.013 77.807 78.316 0 192 41 6 0 0 0 0.00021114 1 47262 81.017 51.273 1 0.72668 0.73194 0 27850000 13685000 14165000 22858 1223 8602 8803 35858 35858 LPEASQSPLVLK 12 1 0 Unmodified _LPEASQSPLVLK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q9BRL8;F8W9Y9 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.3819 2 641.374278 1280.734 77096.08 0.60381 0.00038727 0.32864 0.00021078 0.93245 0.00059805 641.374756481729 645.381338277512 90.42 0.61958 90.42 90.173 90.793 0 161 39 6 0 0 0 9.4492E-05 1 50055 96.113 55.39 1 1.5724 1.2435 0 6165200 2536000 3629200 22859 1223 8602 8803 35859 35859 LPEASQSPLVLK 12 1 0 Unmodified _LPEASQSPLVLK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q9BRL8;F8W9Y9 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.3817 2 641.374278 1280.734 77661.16 0.45001 0.00028862 0.12406 7.9568E-05 0.57407 0.00036819 641.374785630272 645.381196082562 90.306 0.72489 90.306 89.863 90.588 0 177 48 6 0 0 0 0.00016981 1 49160 91.701 50.977 1 1.7149 1.4051 0 5388400 1840600 3547800 22860 1223 8602 8803 35860 35860 LPEDPLLSGLLDSPALK 17 1 0 Unmodified _LPEDPLLSGLLDSPALK_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 889.5024 2 889.500935 1776.98732 66566.55 0.78662 0.0006997 0.86722 0.00077139 1.6538 0.0014711 889.501567954533 893.508141397566 131.8 0.70645 131.8 131.51 132.22 0 250 45 8 0 0 0 1.484E-68 2 86004 192.86 192.86 1 1.5227 1.5311 0 27035000 10788000 16247000 22861 587 8603 8804 35861;35862 35861 LPEDPLLSGLLDSPALK 17 1 0 Unmodified _LPEDPLLSGLLDSPALK_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.0106 2 889.500935 1776.98732 67347.4 1.0244 0.00091121 0.87658 0.00077972 1.901 0.0016909 889.501171100384 894.0104847687 131.35 0.71971 131.35 131.07 131.79 0 263 54 7 0 0 0 4.4223E-34 2 87866 188.09 188.09 1 1.6367 1.6689 0 31048000 10901000 20147000 22862 587 8603 8804 35863;35864 35864 LPEELGR 7 0 1 Unmodified _LPEELGR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 407.2267 2 407.226885 812.439217 93852.13 -0.047683 -1.9418E-05 0.19211 7.8233E-05 0.14443 5.8815E-05 407.226865580363 412.231038850857 27.714 0.62725 27.714 27.423 28.05 0 107 24 8 0 0 0 0.028425 1 10888 71.949 0.23453 1 0.98447 0.82154 0 10504000 5434500 5070000 22863 415 8604 8805 35865 35865 LPEEVATPTTDEEK 14 1 0 Unmodified _LPEEVATPTTDEEK_ 0 0 0 O95602;B9ZVN9 O95602 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1;DNA-directed RNA polymerase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.8843 2 779.877775 1557.741 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.695 1 49.695 49.195 50.195 -3.8147E-06 0 0 0 2.3371E-11 1 27998 118.77 99.005 1 22864 1428 8605 8806 35866 35866 LPEHPEGGEPEDDEAPAK 18 1 0 Unmodified _LPEHPEGGEPEDDEAPAK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 959.4313 2 958.929059 1915.84357 62973.56 0.58711 0.000563 0.59309 0.00056873 1.1802 0.0011317 959.430242793764 962.937496601299 27.31 0.43777 27.31 27.1 27.538 -1.9073E-06 57 22 4 0 0 0 1.8896E-05 1 12529 82.85 81.263 1 0.93821 0.94768 0 6954800 3657500 3297400 22865 2079 8606 8807 35867 35867 LPEHPEGGEPEDDEAPAK 18 1 0 Unmodified _LPEHPEGGEPEDDEAPAK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.9573 3 639.621798 1915.84357 75412.13 0.74951 0.0004794 0.014324 9.162E-06 0.76383 0.00048856 639.621495898006 642.293520024124 27.332 0.66421 27.332 27.031 27.695 0 229 38 9 0 0 0 7.3248E-06 1 12546 70.335 70.335 1 0.92326 1.0207 0 57363000 29957000 27406000 22866 2079 8606 8807 35868 35868 LPEHPEGGEPEDDEAPAK 18 1 0 Unmodified _LPEHPEGGEPEDDEAPAK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.2937 3 639.621798 1915.84357 75553.13 0.86159 0.00055109 0.046491 2.9737E-05 0.90808 0.00058083 639.955944815101 642.293503717453 26.767 0.71641 26.767 26.451 27.167 0 206 34 9 0 0 0 4.8959E-12 2 12106 100.58 94.918 1 0.87029 0.97316 0 86397000 45347000 41049000 22867 2079 8606 8807 35869;35870 35870 LPEHPEGGEPEDDEAPAK 18 1 0 Unmodified _LPEHPEGGEPEDDEAPAK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 958.9294 2 958.929059 1915.84357 62724.52 0.77418 0.00074238 0.35062 0.00033622 1.1248 0.0010786 958.928999618557 962.936488749862 26.778 0.40531 26.778 26.588 26.994 0 49 18 4 0 0 0 6.3248E-08 2 12131 105.65 102.79 1 0.86327 0.88144 0 25843000 13656000 12187000 22868 2079 8606 8807 35871;35872 35871 LPEHPEGGEPEDDEAPAK 18 1 0 Unmodified _LPEHPEGGEPEDDEAPAK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.6274 3 639.621798 1915.84357 75658.67 0.37169 0.00023774 -0.024639 -1.576E-05 0.34705 0.00022198 639.621786733166 642.293118914418 31.933 0.7985 31.933 31.449 32.248 -1.9073E-06 304 44 10 0 0 0 0.00019852 2 13483 42.58 38.612 1 1.4356 1.1282 0 17150000 7333600 9816900 22869 2079 8606 8807 35873;35874 35873 LPEHPEGGEPEDDEAPAK 18 1 0 Unmodified _LPEHPEGGEPEDDEAPAK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.9567 3 639.621798 1915.84357 75495.18 0.57864 0.00037011 -0.16787 -0.00010737 0.41077 0.00026274 639.956068992008 642.292884424901 32.252 0.77473 32.252 31.843 32.618 0 197 40 7 0 0 0 0.0021578 2 13225 31.883 31.883 1 1.3858 1.1132 0 15616000 6317600 9298700 22870 2079 8606 8807 35875;35876 35876 LPEIEEYYDGNTSSNSR 17 0 1 Unmodified _LPEIEEYYDGNTSSNSR_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;K0J110;Q9NTA9 B4DW97 B4DW97 DDX50;mcdrh;DKFZp761E0323 ATP-dependent RNA helicase DDX50 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 992.4423 2 987.439791 1972.86503 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.266 1 78.266 77.766 78.766 0 0 0 0 9.5532E-08 1 46318 97.69 84.027 1 22871 416 8607 8808 35877 35877 LPEIEEYYDGNTSSNSR 17 0 1 Unmodified _LPEIEEYYDGNTSSNSR_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;K0J110;Q9NTA9 B4DW97 B4DW97 DDX50;mcdrh;DKFZp761E0323 ATP-dependent RNA helicase DDX50 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 992.9454 2 987.439791 1972.86503 NaN NaN NaN -0.34629 -0.00034194 NaN NaN NaN NaN 77.453 0.30017 77.453 77.35 77.65 0 0 0 0 1.1765E-06 1 46921 82.543 76.884 1 NaN NaN 0 4989500 0 4989500 22872 416 8607 8808 35878 35878 LPEIEEYYDGNTSSNSR 17 0 1 Unmodified _LPEIEEYYDGNTSSNSR_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;K0J110;Q9NTA9 B4DW97 B4DW97 DDX50;mcdrh;DKFZp761E0323 ATP-dependent RNA helicase DDX50 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 987.5056 2 987.439791 1972.86503 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.631 1 77.631 77.131 78.131 0 0 0 0 0.010641 1 46982 44.511 38.478 1 22873 416 8607 8808 35879 35879 LPEIEEYYDGNTSSNSR 17 0 1 Unmodified _LPEIEEYYDGNTSSNSR_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;K0J110;Q9NTA9 B4DW97 B4DW97 DDX50;mcdrh;DKFZp761E0323 ATP-dependent RNA helicase DDX50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 992.4424 2 987.439791 1972.86503 62147.62 0.15781 0.00015583 -0.21652 -0.0002138 -0.058705 -5.7968E-05 987.940789833305 992.945369761589 89.894 0.58798 89.894 89.573 90.161 0 134 39 6 0 0 0 0.017459 1 49621 26.969 21.363 1 1.3887 1.2013 0 2611400 1182000 1429400 22874 416 8607 8808 35880 35880 LPEIEEYYDGNTSSNSR 17 0 1 Unmodified _LPEIEEYYDGNTSSNSR_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;K0J110;Q9NTA9 B4DW97 B4DW97 DDX50;mcdrh;DKFZp761E0323 ATP-dependent RNA helicase DDX50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 992.4414 2 987.439791 1972.86503 62256.39 -0.00042838 -4.23E-07 -0.070312 -6.9429E-05 -0.07074 -6.9851E-05 987.440252659197 992.44307407414 89.853 0.56784 89.853 89.607 90.174 0 147 37 6 0 0 0 0.016366 2 48852 27.672 26.518 1 1.4002 1.2589 0 2255700 884220 1371400 22875 416 8607 8808 35881;35882 35882 LPELEQLER 9 0 1 Unmodified _LPELEQLER_ 0 0 0 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.8131 2 563.808771 1125.60299 80932.47 0.69874 0.00039395 -0.16594 -9.356E-05 0.53279 0.00030039 563.808680721661 568.812844532308 79.972 0.57528 79.972 79.644 80.22 0 256 48 7 0 0 0 0.001341 2 47376 86.67 69.894 1 0.87363 0.96734 0 62317000 32576000 29742000 22876 925 8608 8809 35883;35884 35883 LPELEQLER 9 0 1 Unmodified _LPELEQLER_ 0 0 0 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.809 2 563.808771 1125.60299 81028.88 0.83301 0.00046966 -0.18535 -0.0001045 0.64766 0.00036516 563.808595836224 568.812842789495 78.949 0.56636 78.949 78.594 79.161 0 296 48 8 0 0 0 0.0053447 2 47781 66.962 50.245 1 0.97855 1.1163 0 94659000 48917000 45742000 22877 925 8608 8809 35885;35886 35885 LPELEQLER 9 0 1 Unmodified _LPELEQLER_ 0 0 0 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.3155 2 563.808771 1125.60299 79870.84 0.7229 0.00040758 -0.26187 -0.00014765 0.46103 0.00025993 563.808454570962 568.812728898341 91.566 0.62009 91.566 91.199 91.819 0 221 45 6 0 0 0 0.027124 2 50753 47.187 47.187 1 1.5039 1.293 0 7759600 2958900 4800700 22878 925 8608 8809 35887;35888 35887 LPEPTTR 7 0 1 Unmodified _LPEPTTR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 407.2266 2 407.226885 812.439217 94822.25 0.07949 3.237E-05 0.95428 0.00038861 1.0338 0.00042098 407.226816290331 412.230862308962 25.291 0.61286 25.291 24.916 25.528 1.9073E-06 172 31 10 0 0 0 0.010107 2 10801 119.56 30.822 1 0.84551 0.97574 0 155540000 90938000 64606000 22879 1750 8609 8810 35889;35890 35889 LPEPTTR 7 0 1 Unmodified _LPEPTTR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 407.2267 2 407.226885 812.439217 93451.21 0.017576 7.1573E-06 -0.037107 -1.5111E-05 -0.019532 -7.9538E-06 407.226787761285 412.230877324105 25.008 0.55468 25.008 24.773 25.328 0 115 21 10 0 0 0 0.010285 2 10638 125.08 10.356 1 0.88971 1.0193 0 171340000 86678000 84658000 22880 1750 8609 8810 35891;35892 35892 LPEQPVDVPSEIADSSMTRPQELPELPK 28 1 1 Oxidation (M) _LPEQPVDVPSEIADSSM(ox)TRPQELPELPK_ LPEQPVDVPSEIADSSM(1)TRPQELPELPK LPEQPVDVPSEIADSSM(40.43)TRPQELPELPK 0 1 1 P18583;D3DSF7 P18583 P18583 SON Protein SON MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1046.536 3 1040.19194 3117.554 61455.22 0.61611 0.00064087 -0.39165 -0.00040739 0.22446 0.00023348 1040.86004350684 1046.53394886058 106.55 0.35451 106.55 106.36 106.71 0 108 27 7 0 0 0 7.9727E-07 1 67876 40.428 40.428 1 1.8815 2.1182 0 13698000 5387900 8310400 22881 1499 8610 8811 35893 35893 1254 LPETNLFETEETRK 14 1 1 Unmodified _LPETNLFETEETRK_ 0 0 1 Q15046;Q6ZTI3 Q15046 Q15046 KARS Lysine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.6326 3 569.624703 1705.85228 80080.9 0.59747 0.00034033 0.35816 0.00020402 0.95563 0.00054435 569.959025810543 575.632375134171 69.279 0.70363 69.279 69.007 69.711 0 253 58 6 0 0 0 3.1772E-05 1 40167 80.706 72.529 1 1.862 2.0708 0 19760000 7534400 12226000 22882 1749 8611 8812 35894 35894 LPETNLFETEETRK 14 1 1 Unmodified _LPETNLFETEETRK_ 0 0 1 Q15046;Q6ZTI3 Q15046 Q15046 KARS Lysine--tRNA ligase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.3412 3 569.624703 1705.85228 79315.55 0.54159 0.0003085 -0.16052 -9.1438E-05 0.38107 0.00021706 569.624823081295 575.632238556919 67.784 0.75331 67.784 67.449 68.203 0 273 64 7 0 0 0 0.0050129 1 40074 44.925 44.925 1 2.0741 2.3952 0 30645000 10784000 19861000 22883 1749 8611 8812 35895 35895 LPEVQQATK 9 1 0 Unmodified _LPEVQQATK_ 0 0 0 E7ETY2;B4DRA2;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.2857 2 507.284931 1012.55531 90802.4 0.54942 0.00027871 1.1728 0.00059493 1.7222 0.00087364 507.285253021689 511.292670118509 29.555 0.48976 29.555 29.381 29.871 0 142 37 6 0 0 0 0.0059592 2 14214 65.404 41.636 1 0.79274 0.82446 0 33749000 18301000 15448000 22884 1712;1225 8612 8813 35896;35897 35897 LPFLGLALSSR 11 0 1 Unmodified _LPFLGLALSSR_ 0 0 0 A8MX75;P18074;E7EVE9;K7EIT8;Q2TB79;K7ENL1;B4E0F6 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.3557 2 587.353148 1172.69174 81929.28 1.2303 0.0007226 -0.50218 -0.00029495 0.72809 0.00042765 587.352982903561 592.356606685364 118.98 0.51453 118.98 118.78 119.29 -7.6294E-06 123 31 6 0 0 0 0.0030512 2 76382 60.518 40.732 1 0.58883 0.59105 0 16075000 9292100 6782500 22885 799 8613 8814 35898;35899 35898 LPFLGLALSSR 11 0 1 Unmodified _LPFLGLALSSR_ 0 0 0 A8MX75;P18074;E7EVE9;K7EIT8;Q2TB79;K7ENL1;B4E0F6 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.3576 2 587.353148 1172.69174 82389.13 0.54862 0.00032223 -0.49111 -0.00028845 0.05751 3.3779E-05 587.352823932105 592.356598735877 118.45 0.4765 118.45 118.24 118.72 -7.6294E-06 112 28 6 0 0 0 0.00104 1 77842 70.552 55.401 1 0.63632 0.63329 0 7891500 4371900 3519600 22886 799 8613 8814 35900 35900 LPFLGLALSSR 11 0 1 Unmodified _LPFLGLALSSR_ 0 0 0 A8MX75;P18074;E7EVE9;K7EIT8;Q2TB79;K7ENL1;B4E0F6 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.3585 2 587.353148 1172.69174 81299.68 0.57444 0.0003374 0.18577 0.00010911 0.76021 0.00044651 587.854683269947 592.357268941986 131.11 0.49957 131.11 130.84 131.34 -1.5259E-05 80 21 5 0 0 0 0.0068025 1 79469 53.751 38.089 1 1.1531 0.96827 0 3121900 1390800 1731000 22887 799 8613 8814 35901 35901 LPFLGLALSSR 11 0 1 Unmodified _LPFLGLALSSR_ 0 0 0 A8MX75;P18074;E7EVE9;K7EIT8;Q2TB79;K7ENL1;B4E0F6 A8MX75 A8MX75 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.3571 2 587.353148 1172.69174 81133.74 0.87568 0.00051433 0.016368 9.6141E-06 0.89205 0.00052395 587.353048155524 592.357231224312 130.82 0.47145 130.82 130.6 131.08 0 69 20 4 0 0 0 0.00076687 1 78422 72.643 49.215 1 0.73046 0.63194 0 2701800 1476900 1224900 22888 799 8613 8814 35902 35902 LPFLSSSNLSLDVLR 15 0 1 Unmodified _LPFLSSSNLSLDVLR_ 0 0 0 Q9Y244 Q9Y244 Q9Y244 POMP Proteasome maturation protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.9727 2 830.967062 1659.91957 NaN NaN NaN 0.0094461 7.8494E-06 NaN NaN NaN NaN 127.73 0.2679 127.73 127.62 127.89 0 0 0 0 2.5294E-10 1 83233 108.56 71.452 1 NaN NaN 0 2001100 0 2001100 22889 2122 8614 8815 35903 35903 LPFLSSSNLSLDVLR 15 0 1 Unmodified _LPFLSSSNLSLDVLR_ 0 0 0 Q9Y244 Q9Y244 Q9Y244 POMP Proteasome maturation protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.9726 2 830.967062 1659.91957 NaN NaN NaN 0.10315 8.5714E-05 NaN NaN NaN NaN 127.4 0.27835 127.4 127.24 127.52 0 0 0 0 3.067E-10 1 85043 106.49 71.268 1 NaN NaN 0 2484600 0 2484600 22890 2122 8614 8815 35904 35904 LPFPIIDDR 9 0 1 Unmodified _LPFPIIDDR_ 0 0 0 V9HWC7;P30041;A4UCS6 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.3036 2 543.303124 1084.5917 NaN NaN NaN -0.068513 -3.7223E-05 NaN NaN NaN NaN 106.65 0.44264 106.65 106.45 106.9 0 0 0 0 0.029064 1 66363 53.775 32.475 1 NaN NaN 0 3302000 3302000 0 22891 1527 8615 8816 35905 35905 LPFPIIDDR 9 0 1 Unmodified _LPFPIIDDR_ 0 0 0 V9HWC7;P30041;A4UCS6 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.3075 2 543.303124 1084.5917 83083.41 0.69559 0.00037791 0.037796 2.0535E-05 0.73338 0.00039845 543.303019492359 548.307048223297 106 1.0222 106 105.62 106.64 0 210 65 5 0 0 0 0.0010227 2 67377 91.069 76.533 1 5.9289 6.7331 0 48684000 7703000 40981000 22892 1527 8615 8816 35906;35907 35906 LPFPIIDDR 9 0 1 Unmodified _LPFPIIDDR_ 0 0 0 V9HWC7;P30041;A4UCS6 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.3076 2 543.303124 1084.5917 85741.58 0.84324 0.00045814 -0.017697 -9.6148E-06 0.82555 0.00044852 543.302813146413 548.307202874782 117.8 0.51877 117.8 117.55 118.07 0 74 22 5 0 0 0 0.01379 2 69461 56.258 56.258 1 2.7873 2.4178 0 2111000 412180 1698800 22893 1527 8615 8816 35908;35909 35908 LPFTDTEQECLVK 13 1 0 Unmodified _LPFTDTEQECLVK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.3922 2 790.387256 1578.75996 66936.16 0.65536 0.00051799 -0.20876 -0.000165 0.4466 0.00035299 790.388088294115 794.393865356326 86.205 0.6393 86.205 85.872 86.511 0 197 51 5 0 0 0 0.0032223 1 51669 50.284 45.985 1 1.4477 1.4219 0 23177000 7833300 15344000 22894 1945 8616 8817 35910 35910 LPFTDTEQECLVK 13 1 0 Unmodified _LPFTDTEQECLVK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.3888 2 790.387256 1578.75996 66747.05 0.71025 0.00056138 -0.19377 -0.00015315 0.51648 0.00040822 790.387959933341 794.394141899062 85.344 0.73558 85.344 84.969 85.704 0 291 60 7 0 0 0 0.0017989 2 52386 56.359 48.713 1 1.2999 1.3651 0 23994000 10030000 13965000 22895 1945 8616 8817 35911;35912 35912 LPFTDTEQECLVK 13 1 0 Unmodified _LPFTDTEQECLVK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.3883 2 790.387256 1578.75996 67694.63 0.67061 0.00053004 -0.15324 -0.00012112 0.51738 0.00040893 790.387795344101 794.394385688952 98.531 0.68421 98.531 98.191 98.875 7.6294E-06 234 41 7 0 0 0 0.00011321 2 55578 75.229 75.229 1 2.642 2.0972 0 10159000 3040900 7118100 22896 1945 8616 8817 35913;35914 35914 LPFTDTEQECLVK 13 1 0 Unmodified _LPFTDTEQECLVK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 794.3953 2 790.387256 1578.75996 67529.38 0.81061 0.0006407 -0.22759 -0.00017989 0.58302 0.00046081 790.387849463076 794.394294090792 98.424 0.71595 98.424 98.084 98.8 0 231 44 7 0 0 0 0.00021195 1 54557 85.813 68.787 1 2.6129 2.1181 0 13260000 3603400 9656300 22897 1945 8616 8817 35915 35915 LPGAIDVIGQTITISR 16 0 1 Unmodified _LPGAIDVIGQTITISR_ 0 0 0 B4DTW7;Q6UN15;A0A0B4J203 B4DTW7 B4DTW7 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.4856 2 827.480337 1652.94612 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118 1 118 117.5 118.5 -7.6294E-06 0 0 0 0.00098344 1 75648 67.153 43.917 1 22898 1035 8617 8818 35916 35916 LPGAIDVIGQTITISR 16 0 1 Unmodified _LPGAIDVIGQTITISR_ 0 0 0 B4DTW7;Q6UN15;A0A0B4J203 B4DTW7 B4DTW7 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.4836 2 827.480337 1652.94612 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.55 1 117.55 117.05 118.05 7.6294E-06 0 0 0 0.00091716 1 77124 64.55 41.315 1 22899 1035 8617 8818 35917 35917 LPGEGNAGLLGLGPEAAAPGK 21 1 0 Unmodified _LPGEGNAGLLGLGPEAAAPGK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7;E9PIQ3;H0Y799;A0A140T9X8;E9PKQ9 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.0104 2 945.00999 1888.00543 62521.4 0.75234 0.00071096 -0.026162 -2.4723E-05 0.72617 0.00068624 945.009566753963 949.017018705718 103.15 0.5072 103.15 102.92 103.43 0 225 43 7 0 0 0 1.714E-21 3 63501 115.82 102.7 1 0.54315 0.5342 0 23717000 15363000 8354300 22900 367 8618 8819 35918;35919;35920 35919 LPGEGNAGLLGLGPEAAAPGK 21 1 0 Unmodified _LPGEGNAGLLGLGPEAAAPGK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7;E9PIQ3;H0Y799;A0A140T9X8;E9PKQ9 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.0201 2 945.00999 1888.00543 63211.79 1.0404 0.00098316 -0.77195 -0.0007295 0.26842 0.00025366 945.510711039923 949.016523071807 102.49 0.60661 102.49 102.22 102.82 0 219 48 6 0 0 0 3.1097E-07 2 64576 60.657 49.218 1 0.66784 0.69953 0 19442000 11164000 8278100 22901 367 8618 8819 35921;35922 35922 LPGEGNAGLLGLGPEAAAPGK 21 1 0 Unmodified _LPGEGNAGLLGLGPEAAAPGK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7;E9PIQ3;H0Y799;A0A140T9X8;E9PKQ9 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 949.0164 2 945.00999 1888.00543 62001.23 0.78247 0.00073944 -0.20562 -0.00019432 0.57684 0.00054512 945.511547360213 949.016605232738 115.02 0.47188 115.02 114.8 115.27 0 133 21 8 0 0 0 3.2736E-05 3 67343 45.883 34.443 1 1.0141 0.81231 0 8485600 4015800 4469700 22902 367 8618 8819 35923;35924;35925 35925 LPGEGNAGLLGLGPEAAAPGK 21 1 0 Unmodified _LPGEGNAGLLGLGPEAAAPGK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7;E9PIQ3;H0Y799;A0A140T9X8;E9PKQ9 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 949.0176 2 945.00999 1888.00543 63173.2 0.67249 0.00063551 -0.17728 -0.00016753 0.49521 0.00046798 945.511404267304 949.016599870581 114.89 0.51044 114.89 114.67 115.18 0 126 23 8 0 0 0 1.1867E-07 2 66295 66.022 54.916 1 1.082 0.88791 0 9051700 4517000 4534700 22903 367 8618 8819 35926;35927 35927 LPGELEPVQATQNK 14 1 0 Unmodified _LPGELEPVQATQNK_ 0 0 0 Q6IAM0;O75821;K7EL20;K7EP16;K7ER90 Q6IAM0 Q6IAM0 EIF3G Eukaryotic translation initiation factor 3 subunit G MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.9167 2 762.406837 1522.79912 69833.63 0.57655 0.00043956 0.21288 0.0001623 0.78943 0.00060186 762.406846010063 766.413948058465 63.651 0.57516 63.651 63.344 63.919 3.8147E-06 244 56 6 0 0 0 6.6215E-05 2 36479 90.614 90.614 1 1.6368 1.6134 0 19491000 8074000 11417000 22904 1414 8619 8820 35928;35929 35928 LPGELEPVQATQNK 14 1 0 Unmodified _LPGELEPVQATQNK_ 0 0 0 Q6IAM0;O75821;K7EL20;K7EP16;K7ER90 Q6IAM0 Q6IAM0 EIF3G Eukaryotic translation initiation factor 3 subunit G ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.9155 2 762.406837 1522.79912 NaN NaN NaN 0.081673 6.2268E-05 NaN NaN NaN NaN 62.528 0.61567 62.528 62.318 62.934 0 0 0 0 2.8359E-15 1 36675 126.66 126.66 1 NaN NaN 0 18590000 0 18590000 22905 1414 8619 8820 35930 35930 LPGGELNPGEDEVEGLK 17 1 0 Unmodified _LPGGELNPGEDEVEGLK_ 0 0 0 B2R6U8;A0A024R6W2;O43809;H3BV41;H3BND3 B2R6U8 B2R6U8 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.9409 2 876.936156 1751.85776 66862.63 0.82875 0.00072676 0.65121 0.00057107 1.48 0.0012978 877.437932425859 880.94401592329 84.322 0.30994 84.322 84.179 84.489 0 57 23 4 0 0 0 6.3645E-05 2 50537 74.987 74.987 1 1.2765 1.2512 0 22455000 8746400 13709000 22906 209 8620 8821 35931;35932 35931 LPGGELNPGEDEVEGLK 17 1 0 Unmodified _LPGGELNPGEDEVEGLK_ 0 0 0 B2R6U8;A0A024R6W2;O43809;H3BV41;H3BND3 B2R6U8 B2R6U8 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.9471 2 876.936156 1751.85776 NaN NaN NaN 0.50571 0.00044348 NaN NaN NaN NaN 83.465 0.45403 83.465 83.311 83.765 0 0 0 0 6.1098E-06 2 51146 79.875 65.184 1 NaN NaN 0 10119000 0 10119000 22907 209 8620 8821 35933;35934 35933 LPGGHQTVLFSATLPK 16 1 0 Unmodified _LPGGHQTVLFSATLPK_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.6533 3 555.982274 1664.92499 83145.63 0.59886 0.00033296 0.02196 1.221E-05 0.62082 0.00034517 556.31612144601 558.653744936525 88.017 1.014 88.017 87.724 88.738 0 299 84 5 0 0 0 0.00075437 2 52996 40.844 40.844 1 0.85337 0.92211 0 35247000 14554000 20693000 22908 1933 8621 8822 35935;35936 35935 LPGGHQTVLFSATLPK 16 1 0 Unmodified _LPGGHQTVLFSATLPK_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.9833 3 555.982274 1664.92499 85594.47 0.42078 0.00023394 0.12189 6.7771E-05 0.54267 0.00030172 556.316296347238 558.654013005171 86.45 0.76796 86.45 86.177 86.945 0 303 67 6 0 0 0 0.00017563 3 53227 48.907 48.907 1 0.94315 1.0434 0 45332000 25719000 19614000 22909 1933 8621 8822 35937;35938;35939 35939 LPGGHQTVLFSATLPK 16 1 0 Unmodified _LPGGHQTVLFSATLPK_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.9833 3 555.982274 1664.92499 80896.15 0.25267 0.00014048 0.4442 0.00024697 0.69687 0.00038744 555.982879180717 558.653900719358 100.37 0.54439 100.37 100.13 100.67 0 225 46 6 0 0 0 0.045006 2 56796 16.522 14.254 1 1.5342 1.2071 0 11082000 3540200 7541300 22910 1933 8621 8822 35940;35941 35941 LPGGHQTVLFSATLPK 16 1 0 Unmodified _LPGGHQTVLFSATLPK_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.6542 3 555.982274 1664.92499 83800.34 0.47485 0.00026401 0.073873 4.1072E-05 0.54872 0.00030508 556.316112756284 558.653808331296 100.03 0.51318 100.03 99.783 100.3 0 223 46 6 0 0 0 0.02253 1 55658 21.359 21.359 1 1.367 1.1226 0 9358600 4298800 5059800 22911 1933 8621 8822 35942 35942 LPGGPTLTFQVK 12 1 0 Unmodified _LPGGPTLTFQVK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3713 2 629.363713 1256.71287 77314.65 0.81457 0.00051266 -0.02645 -1.6647E-05 0.78812 0.00049601 629.363642321423 633.370655542356 93.837 0.88963 93.837 93.402 94.292 0 468 79 8 0 0 0 1.5784E-12 2 56797 127.51 105.28 1 0.87585 1.0052 0 197530000 106450000 91084000 22912 493 8622 8823 35943;35944 35944 LPGGPTLTFQVK 12 1 0 Unmodified _LPGGPTLTFQVK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.3654 2 629.363713 1256.71287 76941.54 0.81947 0.00051574 -0.46401 -0.00029203 0.35545 0.00022371 629.363369025688 633.370402801982 92.998 0.85626 92.998 92.624 93.48 0 410 72 8 0 0 0 1.3822E-12 2 57524 128.81 128.81 1 0.88308 0.99852 0 132000000 70330000 61670000 22913 493 8622 8823 35945;35946 35945 LPGGPTLTFQVK 12 1 0 Unmodified _LPGGPTLTFQVK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.8657 2 629.363713 1256.71287 76433.76 0.6534 0.00041123 -0.12348 -7.7716E-05 0.52992 0.00033351 629.363594840851 633.370648241782 107.2 0.66357 107.2 106.92 107.58 7.6294E-06 257 41 8 0 0 0 0.00021065 1 61264 80.916 71.559 1 1.2298 1.0162 0 43223000 18190000 25033000 22914 493 8622 8823 35947 35947 LPGHAGSINEVAFHPDEPIIISASSDK 27 1 0 Unmodified _LPGHAGSINEVAFHPDEPIIISASSDK_ 0 0 0 B2R9I9;A0MNP2;Q96DI7;Q9NSS8 B2R9I9 B2R9I9 WDR57;SNRNP40;DKFZp434D199 U5 small nuclear ribonucleoprotein 40 kDa protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.6129 4 701.10807 2800.40317 NaN NaN NaN 0.029084 2.0391E-05 NaN NaN NaN NaN 96.675 0.5868 96.675 96.546 97.133 0 0 0 0 0.035262 1 58913 21.255 15.485 1 NaN NaN 0 13449000 0 13449000 22915 643 8623 8824 35948 35948 LPGHAGSINEVAFHPDEPIIISASSDK 27 1 0 Unmodified _LPGHAGSINEVAFHPDEPIIISASSDK_ 0 0 0 B2R9I9;A0MNP2;Q96DI7;Q9NSS8 B2R9I9 B2R9I9 WDR57;SNRNP40;DKFZp434D199 U5 small nuclear ribonucleoprotein 40 kDa protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.6102 4 701.10807 2800.40317 NaN NaN NaN 1.0365 0.00072668 NaN NaN NaN NaN 96.678 0.47968 96.678 96.535 97.014 0 0 0 0 0.0091358 1 59054 27.89 20.778 1 NaN NaN 0 16656000 16656000 0 22916 643 8623 8824 35949 35949 LPGHAGSINEVAFHPDEPIIISASSDK 27 1 0 Unmodified _LPGHAGSINEVAFHPDEPIIISASSDK_ 0 0 0 B2R9I9;A0MNP2;Q96DI7;Q9NSS8 B2R9I9 B2R9I9 WDR57;SNRNP40;DKFZp434D199 U5 small nuclear ribonucleoprotein 40 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 703.3625 4 701.10807 2800.40317 71471.27 0.74188 0.00052014 -0.087213 -6.1146E-05 0.65467 0.00045899 701.609435758292 703.362289972626 107.88 0.53503 107.88 107.64 108.18 0 210 29 11 0 0 0 0.0022296 2 61832 29.346 29.346 1 1.0498 0.82371 0 11396000 5125800 6270700 22917 643 8623 8824 35950;35951 35950 LPGPAPDKPNVYDFK 15 2 0 Unmodified _LPGPAPDKPNVYDFK_ 0 0 1 B4DMK6;Q9NP77 B4DMK6 B4DMK6 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.6345 3 553.290996 1656.85116 NaN NaN NaN 0.12856 7.1129E-05 NaN NaN NaN NaN 70.435 0.40083 70.435 70.186 70.587 0 0 0 0 0.010164 1 40929 50.843 37.725 1 NaN NaN 0 5127300 0 5127300 22918 1006 8624 8825 35952 35952 LPHLEAVVIGR 11 0 1 Unmodified _LPHLEAVVIGR_ 0 0 0 F8W6G5;C9JZ40;F5HRF8;A0A0A0MRW7;Q7Z2E3;F8WBD6;E7EUY4;F8WBM3;Q6JV79;E7EVB7;C9J8U3 F8W6G5 F8W6G5 APTX Aprataxin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.9228 3 401.91179 1202.71354 97129.51 0.45867 0.00018435 -0.20515 -8.2452E-05 0.25352 0.00010189 401.91158077514 405.247726082592 81.483 0.39818 81.483 81.297 81.695 0 77 32 4 0 0 0 0.0075334 1 49917 61.213 61.213 1 0.69077 0.6866 0 8500400 4532800 3967700 22919 472 8625 8826 35953 35953 LPHLLLYGPPGTGK 14 1 0 Unmodified _LPHLLLYGPPGTGK_ 0 0 0 Q6LES9;A8K3S0;Q59GW7;P40937;C9JH72;F5H304;F5H0U6 Q6LES9 Q6LES9 RFC5 Replication factor C subunit 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.2857 3 488.285405 1461.83439 NaN NaN NaN 0.95167 0.00046469 NaN NaN NaN NaN 90.601 0.72852 90.601 90.174 90.902 0 0 0 0 0.049993 1 55943 22.991 18.475 1 NaN NaN 0 10235000 10235000 0 22920 726 8626 8827 35954 35954 LPHSVTCSLCGEVDQNEETQDFEK 24 1 0 Unmodified _LPHSVTCSLCGEVDQNEETQDFEK_ 0 0 0 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 942.0815 3 941.412972 2821.21709 64766.54 0.66809 0.00062895 -0.55472 -0.00052222 0.11337 0.00010673 941.746836849353 944.418191585334 74.66 0.37255 74.66 74.438 74.81 7.6294E-06 111 32 6 0 0 0 6.435E-06 3 44845 41.166 38.61 1 0.43594 0.43846 0 16051000 8899000 7152400 22921 1323 8627 8828 35955;35956;35957 35956 LPHSVTCSLCGEVDQNEETQDFEK 24 1 0 Unmodified _LPHSVTCSLCGEVDQNEETQDFEK_ 0 0 0 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 941.7484 3 941.412972 2821.21709 62077.14 0.48656 0.00045806 -0.26331 -0.00024789 0.22325 0.00021017 941.74720529069 944.418358466219 87.074 0.50106 87.074 86.836 87.337 0 212 27 11 0 0 0 0.0012101 3 47781 24.833 24.657 1 0.52342 0.4144 0 10423000 6796300 3626800 22922 1323 8627 8828 35958;35959;35960 35960 LPHVLLLQLGTTFFK 15 1 0 Unmodified _LPHVLLLQLGTTFFK_ 0 0 0 B2R6U8;A0A024R6W2;O43809;H3BV41;H3BND3 B2R6U8 B2R6U8 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.3533 3 576.346664 1726.01816 80135.72 0.82702 0.00047665 0.017981 1.0363E-05 0.84501 0.00048702 576.346571282165 579.017893199465 133.06 0.13423 133.06 132.99 133.13 1.5259E-05 23 4 7 0 0 0 0.00015211 2 87045 56.286 56.286 1 1.0499 1.0339 0 8597000 3419100 5177900 22923 209 8628 8829 35961;35962 35961 LPHVLLLQLGTTFFK 15 1 0 Unmodified _LPHVLLLQLGTTFFK_ 0 0 0 B2R6U8;A0A024R6W2;O43809;H3BV41;H3BND3 B2R6U8 B2R6U8 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.3467 3 576.346664 1726.01816 80708.94 0.85531 0.00049295 -0.23764 -0.00013696 0.61767 0.00035599 576.346756036766 579.35237088987 133.02 0.25247 133.02 132.82 133.08 0 37 12 8 0 0 0 2.0829E-06 2 89210 95.428 95.428 1 0.99799 1.0101 0 16476000 7388100 9088100 22924 209 8628 8829 35963;35964 35964 LPIFFFGTHET 11 0 0 Unmodified _LPIFFFGTHET_ 0 0 0 Q8N4N4 Q8N4N4 Q8N4N4 PSIP1 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.8359 2 654.834788 1307.65502 NaN NaN NaN 0.45614 0.00029869 NaN NaN NaN NaN 120.12 0.54532 120.12 119.88 120.43 0 0 0 0 0.0025071 1 77300 73.931 44.844 1 22925 1908 8629 8830 35965 35965 LPIFFFGTHETAFLGPK 17 1 0 Unmodified _LPIFFFGTHETAFLGPK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.3458 3 641.345212 1921.01381 76162.13 0.85015 0.00054524 0.021652 1.3887E-05 0.8718 0.00055913 641.679489156744 644.350866550171 123.84 1.6537 123.84 122.96 124.61 -7.6294E-06 623 120 9 0 0 0 2.0538E-05 3 80054 76.85 76.85 1 0.7061 0.69219 0 20745000 11688000 9056600 22926 1405 8630 8831 35966;35967;35968 35966 LPIFFFGTHETAFLGPK 17 1 0 Unmodified _LPIFFFGTHETAFLGPK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 961.5129 2 961.51418 1921.01381 64080.69 0.72226 0.00069446 -0.23976 -0.00023054 0.4825 0.00046393 961.513779765315 965.521184363956 122 0.45227 122 121.74 122.2 0 80 31 4 0 0 0 0.020993 1 80848 24.696 24.696 1 0.62514 0.63038 0 7698100 5092300 2605800 22927 1405 8630 8831 35969 35969 LPIFFFGTHETAFLGPK 17 1 0 Unmodified _LPIFFFGTHETAFLGPK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.6803 3 641.345212 1921.01381 75982.02 0.99905 0.00064073 0.0089089 5.7137E-06 1.008 0.00064645 641.6794812801 644.016635962566 122.97 1.4979 122.97 122.33 123.83 0 646 113 8 0 0 0 2.1454E-05 4 81889 68.944 68.944 1 0.6779 0.76452 0 62413000 35665000 26748000 22928 1405 8630 8831 35970;35971;35972;35973 35972 LPIFFFGTHETAFLGPK 17 1 0 Unmodified _LPIFFFGTHETAFLGPK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.0173 3 641.345212 1921.01381 75427.28 1.1582 0.00074278 -0.10608 -6.8036E-05 1.0521 0.00067474 641.679458513384 644.350764641027 134.19 0.41051 134.19 134.04 134.45 0 160 19 12 0 0 0 3.192E-11 2 81808 102.78 102.78 1 1.2391 1.0596 0 69332000 32601000 36731000 22929 1405 8630 8831 35974;35975 35974 LPIFFFGTHETAFLGPK 17 1 0 Unmodified _LPIFFFGTHETAFLGPK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.68 3 641.345212 1921.01381 75647.3 1.2024 0.00077113 0.050484 3.2378E-05 1.2529 0.00080351 641.679596076541 644.016662607938 133.99 0.63742 133.99 133.78 134.41 0 226 31 10 0 0 0 2.0705E-05 2 80727 59.872 59.872 1 1.2206 1.0264 0 50969000 22620000 28349000 22930 1405 8630 8831 35976;35977 35977 LPIGDVATQYFADR 14 0 1 Unmodified _LPIGDVATQYFADR_ 0 0 0 Q6IBT3;Q53HV2;Q99832;B7Z7I4;B7Z1C9 Q6IBT3 Q6IBT3 CCT7 T-complex protein 1 subunit eta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.908 2 783.401555 1564.78856 NaN NaN NaN -0.057552 -4.5086E-05 NaN NaN NaN NaN 106.39 0.42174 106.39 106.21 106.63 0 0 0 0 0.0082904 1 66130 53.237 30.32 1 NaN NaN 0 6052600 0 6052600 22931 1791 8631 8832 35978 35978 LPISDSPPDTQEIHVIEQEK 20 1 0 Unmodified _LPISDSPPDTQEIHVIEQEK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 762.0603 3 759.053262 2274.13796 NaN NaN NaN 0.044393 3.3696E-05 NaN NaN NaN NaN 99.564 0.3364 99.564 99.359 99.696 7.6294E-06 0 0 0 0.049097 1 56305 22.936 19.059 1 NaN NaN 0 2414500 0 2414500 22932 1945 8632 8833 35979 35979 LPISDSPPDTQEIHVIEQEK 20 1 0 Unmodified _LPISDSPPDTQEIHVIEQEK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.0591 3 759.053262 2274.13796 NaN NaN NaN -0.23064 -0.00017507 NaN NaN NaN NaN 99.411 0.34791 99.411 99.203 99.551 0 0 0 0 0.00017698 1 55338 50.883 37.653 1 NaN NaN 0 1881300 0 1881300 22933 1945 8632 8833 35980 35980 LPITCLTIPPR 11 0 1 Unmodified _LPITCLTIPPR_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3;I3L2H5 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.8749 2 640.873391 1279.73223 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.57 1 103.57 103.07 104.07 0 0 0 0 0.051608 1 63890 43.308 19.153 1 22934 1604 8633 8834 35981 35981 LPLAQVSAHPWVR 13 0 1 Unmodified _LPLAQVSAHPWVR_ 0 0 0 B2RC06;J3KT86;Q96GD4 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2851 3 491.949016 1472.82522 85439.14 0.47924 0.00023576 0.12672 6.2342E-05 0.60597 0.00029811 491.949025038991 495.284918155036 82.769 1.0033 82.769 82.296 83.3 7.6294E-06 516 85 10 0 0 0 1.2714E-05 1 49296 80.469 75.922 1 0.78561 0.92462 0 233980000 134590000 99387000 22935 881;1967 8634 8835 35982 35982 LPLAQVSAHPWVR 13 0 1 Unmodified _LPLAQVSAHPWVR_ 0 0 0 B2RC06;J3KT86;Q96GD4 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2823 3 491.949016 1472.82522 86141.59 0.43377 0.00021339 -0.38048 -0.00018718 0.053283 2.6213E-05 491.948795040063 495.619181100141 81.254 0.95396 81.254 80.792 81.746 -7.6294E-06 504 80 10 0 0 0 8.3802E-05 2 49395 66.989 59.444 1 0.74827 0.85593 0 159700000 95637000 64060000 22936 881;1967 8634 8835 35983;35984 35983 LPLAQVSAHPWVR 13 0 1 Unmodified _LPLAQVSAHPWVR_ 0 0 0 B2RC06;J3KT86;Q96GD4 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2847 3 491.949016 1472.82522 84943.81 0.3178 0.00015634 -0.19493 -9.5896E-05 0.12286 6.0443E-05 491.948979962398 495.284888201488 94.145 1.2371 94.145 93.719 94.956 0 454 82 10 0 0 0 0.00011349 3 52479 51.211 51.211 1 1.9283 1.654 0 42077000 14657000 27419000 22937 881;1967 8634 8835 35985;35986;35987 35985 LPLAQVSAHPWVR 13 0 1 Unmodified _LPLAQVSAHPWVR_ 0 0 0 B2RC06;J3KT86;Q96GD4 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.619 3 491.949016 1472.82522 85097.41 0.30618 0.00015062 -0.19825 -9.753E-05 0.10793 5.3094E-05 491.948945481657 495.284803864786 93.841 1.2981 93.841 93.376 94.674 -7.6294E-06 492 84 10 0 0 0 0.00055024 2 51470 43.761 43.761 1 1.8866 1.6456 0 38835000 13954000 24881000 22938 881;1967 8634 8835 35988;35989 35988 LPLATIVK 8 1 0 Unmodified _LPLATIVK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.7891 2 427.789121 853.56369 92799.6 0.34286 0.00014667 -0.52343 -0.00022392 -0.18057 -7.7247E-05 427.788823432921 431.795824003338 80.889 0.84196 80.889 80.483 81.325 0 360 72 7 0 0 0 0.014674 2 47958 62.464 46.832 1 0.76091 0.85693 0 123380000 72584000 50799000 22939 168 8635 8836 35990;35991 35991 LPLATIVK 8 1 0 Unmodified _LPLATIVK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.7891 2 427.789121 853.56369 92077.3 0.15968 6.8311E-05 -0.4406 -0.00018848 -0.28091 -0.00012017 427.788918733751 431.795789526686 79.673 0.86835 79.673 79.294 80.162 -7.6294E-06 320 68 7 0 0 0 0.01993 1 48288 58.815 40.68 1 0.78892 0.88201 0 105230000 58152000 47077000 22940 168 8635 8836 35992 35992 LPLFPEPLHVFAPR 14 0 1 Unmodified _LPLFPEPLHVFAPR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.6512 3 544.980204 1631.91878 82650.12 1.018 0.0005548 -0.26174 -0.00014264 0.75628 0.00041216 544.979966614664 548.316164363057 119.34 1.0537 119.34 118.85 119.9 0 313 68 7 0 0 0 4.1268E-05 2 76718 79.466 79.466 1 0.57914 0.59863 0 23591000 15484000 8107300 22941 222 8636 8837 35993;35994 35994 LPLFPEPLHVFAPR 14 0 1 Unmodified _LPLFPEPLHVFAPR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.9807 3 544.980204 1631.91878 81798.08 0.47916 0.00026113 0.052225 2.8461E-05 0.53139 0.00028959 544.980155185649 548.31643572626 118.4 0.85002 118.4 118.01 118.86 7.6294E-06 289 52 7 0 0 0 3.2372E-05 2 77627 84.365 84.365 1 0.52927 0.54315 0 21113000 13238000 7875000 22942 222 8636 8837 35995;35996 35996 LPLFPEPLHVFAPR 14 0 1 Unmodified _LPLFPEPLHVFAPR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.9803 3 544.980204 1631.91878 81040.44 0.68739 0.00037462 -0.18875 -0.00010286 0.49865 0.00027175 544.980019944652 548.316169130555 130.1 0.54297 130.1 129.83 130.38 0 167 25 9 0 0 0 6.0987E-05 2 78693 69.602 69.602 1 0.90051 0.7521 0 10431000 6165500 4265400 22943 222 8636 8837 35997;35998 35997 LPLFPEPLHVFAPR 14 0 1 Unmodified _LPLFPEPLHVFAPR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.9813 3 544.980204 1631.91878 81007.34 0.94987 0.00051766 -0.12345 -6.7279E-05 0.82642 0.00045038 544.980099710716 548.316178843174 129.81 0.55659 129.81 129.57 130.13 0 117 19 9 0 0 0 2.2366E-05 2 77610 89.629 89.629 1 0.95929 0.77575 0 11588000 6530500 5058000 22944 222 8636 8837 35999;36000 35999 LPLILVGNK 9 1 0 Unmodified _LPLILVGNK_ 0 0 0 H7BXZ6;Q8IXI2 H7BXZ6 H7BXZ6 RHOT1 Mitochondrial Rho GTPase;Mitochondrial Rho GTPase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.8223 2 483.820953 965.627353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.1 1 96.1 95.6 96.6 0 0 0 0 0.024544 1 58520 54.774 9.3795 1 22945 1310 8637 8838 36001 36001 LPLISGFYK 9 1 0 Unmodified _LPLISGFYK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.3052 2 519.305136 1036.59572 85085.11 0.57589 0.00029906 -0.014106 -7.3251E-06 0.56178 0.00029174 519.305076188856 523.312050714143 104.51 1.1158 104.51 103.9 105.02 -7.6294E-06 380 92 5 0 0 0 0.0089883 3 64464 60.59 57.018 1 0.64896 0.69979 0 41477000 23412000 18064000 22946 1665 8638 8839 36002;36003;36004 36003 LPLISGFYK 9 1 0 Unmodified _LPLISGFYK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.3127 2 519.305136 1036.59572 85224.45 0.079465 4.1267E-05 0.45369 0.0002356 0.53316 0.00027687 519.305288640604 523.31233520378 103.54 0.95944 103.54 103.14 104.1 0 385 81 7 0 0 0 0.0074258 3 65264 61.999 61.999 1 0.6695 0.74489 0 51003000 30551000 20452000 22947 1665 8638 8839 36005;36006;36007 36005 LPLISGFYK 9 1 0 Unmodified _LPLISGFYK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 519.3059 2 519.305136 1036.59572 84929.46 0.61342 0.00031855 0.068269 3.5453E-05 0.68169 0.00035401 519.305059882706 523.312369507905 115.94 0.75401 115.94 115.73 116.48 7.6294E-06 146 31 7 0 0 0 0.0035543 2 67980 71.501 61.913 1 0.34593 0.26813 0 13612000 9848100 3763500 22948 1665 8638 8839 36008;36009 36008 LPLISGFYK 9 1 0 Unmodified _LPLISGFYK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.3051 2 519.305136 1036.59572 85293.03 0.53373 0.00027717 0.21126 0.00010971 0.74499 0.00038688 519.305128050573 523.312247479425 115.79 0.73988 115.79 115.45 116.19 0 162 35 7 0 0 0 0.019553 2 66864 51.059 47.574 1 0.3371 0.27515 0 12759000 9184600 3574800 22949 1665 8638 8839 36010;36011 36010 LPLLSR 6 0 1 Unmodified _LPLLSR_ 0 0 0 A6NHR9;J3KTL8;B4DDM9;Q0VGE6;Q96LW0;B3KXL7;B1AL16;Q6TDP4;Q8IX21 A6NHR9 A6NHR9 SMCHD1;KLHL17;FAM178A Structural maintenance of chromosomes flexible hinge domain-containing protein 1;Kelch-like protein 17;Protein FAM178A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 349.732 2 349.731606 697.44866 103652.7 0.045266 1.5831E-05 -0.060338 -2.1102E-05 -0.015073 -5.2713E-06 349.731508223675 354.735639713329 62.463 0.48421 62.463 62.279 62.763 0 142 45 4 0 0 0 0.0065028 1 35843 138.53 20.992 1 1.0184 1.0237 0 15928000 8882900 7045300 22950 684 8639 8840 36012 36012 LPLPSPALEYTLGSR 15 0 1 Unmodified _LPLPSPALEYTLGSR_ 0 0 0 B2RCD8;Q8IU81 B2RCD8 B2RCD8 IRF2BP1 Interferon regulatory factor 2-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.4537 2 807.448505 1612.88246 69954.7 0.83582 0.00067488 -1.4703 -0.0011872 -0.63446 -0.00051229 807.447979054933 812.452627875052 114.73 0.48154 114.73 114.51 114.99 0 107 32 5 0 0 0 0.00021979 4 72785 63.408 57.563 1 1.6477 1.7067 0 10350000 3096700 7253000 22951 882 8640 8841 36013;36014;36015;36016 36014 LPLQDVYK 8 1 0 Unmodified _LPLQDVYK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.286 2 488.279118 974.543683 85984.85 0.011081 5.4108E-06 0.039627 1.9349E-05 0.050708 2.476E-05 488.278840044213 492.286235684905 66.602 2.3442 66.602 66.142 68.486 0 1083 194 8 0 0 0 0.0021172 5 39218 102.72 39.239 1 2.4285 2.9024 0 809000000 234420000 574580000 22952 1658;1790 8641 8842 36017;36018;36019;36020;36021 36021 LPLQDVYK 8 1 0 Unmodified _LPLQDVYK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.2788 2 488.279118 974.543683 86425.4 0.23871 0.00011656 -0.19387 -9.4661E-05 0.044849 2.1899E-05 488.278667658947 492.286143497233 65.576 2.4772 65.576 64.898 67.375 0 1150 207 8 0 0 0 0.0022722 4 38384 101.28 39.382 1 2.4259 2.8627 0 902160000 273710000 628450000 22953 1658;1790 8641 8842 36022;36023;36024;36025 36023 LPLQDVYK 8 1 0 Unmodified _LPLQDVYK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2865 2 488.279118 974.543683 NaN NaN NaN 0.028116 1.3729E-05 NaN NaN NaN NaN 67.476 0.23202 67.476 67.347 67.579 0 0 0 0 0.043729 1 39977 52.403 17.047 1 NaN NaN 0 5606200 0 5606200 22954 1658;1790 8641 8842 36026 36026 LPLQDVYK 8 1 0 Unmodified _LPLQDVYK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.2793 2 488.279118 974.543683 85953.27 0.14695 7.1753E-05 0.10825 5.2856E-05 0.2552 0.00012461 488.279003870223 492.286202592455 76.38 1.8342 76.38 75.888 77.722 0 715 127 8 0 0 0 0.0064556 4 41052 87.181 32.632 1 1.6889 1.4236 0 55703000 19880000 35823000 22955 1658;1790 8641 8842 36027;36028;36029;36030 36030 LPLQDVYK 8 1 0 Unmodified _LPLQDVYK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.2792 2 488.279118 974.543683 85851.95 0.16412 8.0136E-05 0.094908 4.6342E-05 0.25903 0.00012648 488.278966847334 492.286199663509 76.631 1.7022 76.631 76.22 77.923 -7.6294E-06 655 114 8 0 0 0 0.006912 4 39928 85.212 27.931 1 1.7249 1.4511 0 51458000 18520000 32938000 22956 1658;1790 8641 8842 36031;36032;36033;36034 36032 LPLQLDDAVRPEAEGEEEGR 20 0 2 Unmodified _LPLQLDDAVRPEAEGEEEGR_ 0 0 1 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.3731 3 741.701111 2222.0815 70574.48 0.9186 0.00068133 0.34778 0.00025795 1.2664 0.00093928 741.701481423584 748.707785325189 82.981 0.6395 82.981 82.693 83.333 0 306 55 8 0 0 0 1.3283E-23 2 49632 128.14 128.14 1 1.436 1.563 0 69411000 26752000 42659000 22957 610 8642 8843 36035;36036 36036 LPLQLDDAVRPEAEGEEEGR 20 0 2 Unmodified _LPLQLDDAVRPEAEGEEEGR_ 0 0 1 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.7083 3 741.701111 2222.0815 70495.05 0.71666 0.00053155 0.21261 0.00015769 0.92927 0.00068924 742.035608542608 748.37347013148 81.893 0.65344 81.893 81.644 82.297 0 366 57 9 0 0 0 1.3283E-23 2 50209 128.14 128.14 1 1.3625 1.5823 0 84269000 36914000 47354000 22958 610 8642 8843 36037;36038 36038 LPLQLDDAVRPEAEGEEEGR 20 0 2 Unmodified _LPLQLDDAVRPEAEGEEEGR_ 0 0 1 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.7031 3 741.701111 2222.0815 69441.56 0.83087 0.00061626 -0.40241 -0.00029847 0.42846 0.00031779 742.034538582974 748.373443423755 94.682 0.4364 94.682 94.453 94.89 0 172 28 9 0 0 0 1.8172E-06 4 52929 60.034 40.215 1 0.75919 0.6384 0 11856000 5949200 5906300 22959 610 8642 8843 36039;36040;36041;36042 36039 LPLQLDDAVRPEAEGEEEGR 20 0 2 Unmodified _LPLQLDDAVRPEAEGEEEGR_ 0 0 1 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.0356 3 741.701111 2222.0815 69962.3 0.72302 0.00053627 -0.45107 -0.00033456 0.27195 0.00020171 741.700867023844 748.373130732604 94.577 0.45033 94.577 94.338 94.789 0 197 27 10 0 0 0 4.5768E-05 2 52031 43.955 30.328 1 0.80716 0.73915 0 10377000 5851200 4526200 22960 610 8642 8843 36043;36044 36043 LPLQSQVGQYNQPEVPVR 18 0 1 Unmodified _LPLQSQVGQYNQPEVPVR_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1031.552 2 1026.54727 2051.07999 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.207 1 88.207 87.707 88.707 0 0 0 0 0.043407 1 53180 37.613 24.633 1 22961 2100 8643 8844 36045 36045 LPLQSQVGQYNQPEVPVR 18 0 1 Unmodified _LPLQSQVGQYNQPEVPVR_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1032.0533 2 1026.54727 2051.07999 61727.05 0.24275 0.0002492 0.11282 0.00011581 0.35557 0.00036501 1027.04920281203 1032.05333092455 101 0.35627 101 100.83 101.19 0 82 22 6 0 0 0 0.047132 1 56288 21.942 21.942 1 2.6712 2.3151 0 2677900 743180 1934700 22962 2100 8643 8844 36046 36046 LPLSLYK 7 1 0 Unmodified _LPLSLYK_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.2604 2 417.260197 832.50584 95672.27 0.30151 0.00012581 -0.23609 -9.8512E-05 0.065419 2.7297E-05 417.260097530217 421.267113182921 76.128 0.70479 76.128 75.664 76.369 0 143 58 4 0 0 0 0.026944 1 44780 83.377 32.34 1 0.94173 0.92708 0 24083000 12462000 11620000 22963 2007 8644 8845 36047 36047 LPLSLYK 7 1 0 Unmodified _LPLSLYK_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.2674 2 417.260197 832.50584 95537.62 0.045067 1.8805E-05 -0.082834 -3.4563E-05 -0.037767 -1.5759E-05 417.260162696341 421.267161744337 74.874 0.68131 74.874 74.438 75.119 0 171 59 4 0 0 0 0.026953 1 45074 83.614 33.495 1 0.84555 0.85143 0 27087000 11854000 15233000 22964 2007 8644 8845 36048 36048 LPLTPVFEGLAFK 13 1 0 Unmodified _LPLTPVFEGLAFK_ 0 0 0 G3V198;Q12769 G3V198 G3V198 NUP160 Nuclear pore complex protein Nup160 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.4164 2 716.415946 1430.81734 72269.21 1.2481 0.00089418 -0.23299 -0.00016692 1.0151 0.00072726 716.415669001478 720.422730738076 127.22 0.57881 127.22 126.95 127.52 0 155 32 7 0 0 0 9.4234E-05 2 82804 93.058 93.058 1 1.1051 1.1635 0 15406000 6715900 8689700 22965 1271 8645 8846 36049;36050 36050 LPLTPVFEGLAFK 13 1 0 Unmodified _LPLTPVFEGLAFK_ 0 0 0 G3V198;Q12769 G3V198 G3V198 NUP160 Nuclear pore complex protein Nup160 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.4164 2 716.415946 1430.81734 72485.6 0.99418 0.00071224 0.02444 1.7509E-05 1.0186 0.00072975 716.415756413437 720.422908024278 126.77 0.57728 126.77 126.46 127.04 -7.6294E-06 173 35 8 0 0 0 8.0557E-06 2 84538 102.52 102.52 1 1.1065 1.156 0 19275000 9419900 9855200 22966 1271 8645 8846 36051;36052 36052 LPLVTPHTQCR 11 0 1 Unmodified _LPLVTPHTQCR_ 0 0 0 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.2406 3 441.23969 1320.69724 NaN NaN NaN -0.79974 -0.00035288 NaN NaN NaN NaN 42.673 0.3916 42.673 42.536 42.927 0 0 0 0 0.0064741 1 22896 52.693 43.872 1 NaN NaN 0 7759300 0 7759300 22967 1634 8646 8847 36053 36053 LPLVVEDFVK 10 1 0 Unmodified _LPLVVEDFVK_ 0 0 0 H0YER3;H0YE25;H0YF25;B7Z1J9;B7ZKW3;B7ZKW4;Q8NB37 H0YER3 H0YER3 PDDC1 Parkinson disease 7 domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.8492 2 579.842082 1157.66961 NaN NaN NaN 0.0032676 1.8947E-06 NaN NaN NaN NaN 114.78 0.31001 114.78 114.57 114.88 0 0 0 0 0.0024494 1 72856 80.438 37.192 1 NaN NaN 0 2095300 0 2095300 22968 1084 8647 8848 36054 36054 LPLVVEDFVK 10 1 0 Unmodified _LPLVVEDFVK_ 0 0 0 H0YER3;H0YE25;H0YF25;B7Z1J9;B7ZKW3;B7ZKW4;Q8NB37 H0YER3 H0YER3 PDDC1 Parkinson disease 7 domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.849 2 579.842082 1157.66961 NaN NaN NaN -0.11184 -6.4847E-05 NaN NaN NaN NaN 114.2 0.38742 114.2 113.96 114.35 -7.6294E-06 0 0 0 0.0071567 1 74173 66.27 10.26 1 NaN NaN 0 2565800 0 2565800 22969 1084 8647 8848 36055 36055 LPNFGFVVFDDSEPVQK 17 1 0 Unmodified _LPNFGFVVFDDSEPVQK_ 0 0 0 Q6FI03;Q5U0Q1;Q13283;B7Z8K4;Q6ZP53;Q53HH4 Q6FI03 Q6FI03 G3BP;DKFZp686L1159;G3BP1 Ras GTPase-activating protein-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 973.9941 2 969.485816 1936.95708 NaN NaN NaN 0.54127 0.00052476 NaN NaN NaN NaN 123.85 0.52417 123.85 123.58 124.1 -7.6294E-06 0 0 0 0.053818 1 80287 30.828 22.098 1 NaN NaN 0 8914000 0 8914000 22970 1710 8648 8849 36056 36056 LPNFGFVVFDDSEPVQK 17 1 0 Unmodified _LPNFGFVVFDDSEPVQK_ 0 0 0 Q6FI03;Q5U0Q1;Q13283;B7Z8K4;Q6ZP53;Q53HH4 Q6FI03 Q6FI03 G3BP;DKFZp686L1159;G3BP1 Ras GTPase-activating protein-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 973.4938 2 969.485816 1936.95708 NaN NaN NaN 0.38163 0.00036998 NaN NaN NaN NaN 123.46 0.55238 123.46 123.2 123.75 0 0 0 0 8.8307E-19 2 81948 122.66 109.23 1 NaN NaN 0 10526000 0 10526000 22971 1710 8648 8849 36057;36058 36058 LPNFGFVVFDDSEPVQR 17 0 1 Unmodified _LPNFGFVVFDDSEPVQR_ 0 0 0 A0A024RDB2;A0A024RDE5;Q9UN86;A8K6V7 A0A024RDB2 A0A024RDB2 G3BP2 Ras GTPase-activating protein-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 988.4924 2 983.48889 1964.96323 62937.67 0.56956 0.00056016 0.0076007 7.4752E-06 0.57717 0.00056764 983.989757336704 988.99461258345 124.62 0.46049 124.62 124.37 124.83 0 127 31 6 0 0 0 2.0461E-05 1 80885 83.617 83.617 1 2.1231 2.1369 0 9353400 3593000 5760400 22972 382 8649 8850 36059 36059 LPNFGFVVFDDSEPVQR 17 0 1 Unmodified _LPNFGFVVFDDSEPVQR_ 0 0 0 A0A024RDB2;A0A024RDE5;Q9UN86;A8K6V7 A0A024RDB2 A0A024RDB2 G3BP2 Ras GTPase-activating protein-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 988.4985 2 983.48889 1964.96323 62260.08 0.62288 0.0006126 0.11593 0.00011402 0.73881 0.00072661 983.989316617515 988.492853793656 124.24 0.53137 124.24 123.97 124.5 0 143 34 8 0 0 0 4.1233E-05 2 82509 79.466 72.096 1 1.7815 1.7482 0 13817000 4659000 9157700 22973 382 8649 8850 36060;36061 36060 LPNFLSVEPR 10 0 1 Unmodified _LPNFLSVEPR_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.3268 2 586.327131 1170.63971 79698.88 0.72847 0.00042712 -0.057876 -3.3935E-05 0.6706 0.00039319 586.326826634433 591.331197266448 101.38 1.0261 101.38 100.87 101.89 0 356 78 7 0 0 0 4.1608E-08 2 62246 117.53 83.273 1 1.5757 1.6189 0 36350000 13575000 22775000 22974 1012 8650 8851 36062;36063 36063 LPNFLSVEPR 10 0 1 Unmodified _LPNFLSVEPR_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.3273 2 586.327131 1170.63971 79789.63 0.71836 0.00042119 -0.063124 -3.7012E-05 0.65524 0.00038418 586.326817321409 591.331181755457 100.49 0.94707 100.49 100.1 101.04 7.6294E-06 331 75 6 0 0 0 0.00021283 2 63099 93.649 75.209 1 1.6228 1.8751 0 69675000 24681000 44994000 22975 1012 8650 8851 36064;36065 36065 LPNLLGR 7 0 1 Unmodified _LPNLLGR_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 391.7475 2 391.747788 781.481023 98470.47 0.14778 5.7892E-05 0.26306 0.00010305 0.41084 0.00016094 391.747753274668 396.752049094755 73.534 0.54497 73.534 73.3 73.845 0 156 50 4 0 0 0 0.00015331 2 43106 148.37 52.989 1 1.0915 1.1534 0 40561000 17000000 23560000 22976 2147 8651 8852 36066;36067 36067 LPNLLGR 7 0 1 Unmodified _LPNLLGR_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 391.7479 2 391.747788 781.481023 98368.54 0.10416 4.0804E-05 0.195 7.6389E-05 0.29915 0.00011719 391.747735876547 396.751985206888 72.153 0.50078 72.153 71.902 72.403 0 155 44 5 0 0 0 0.00015331 1 43266 148.37 58.91 1 1.1969 1.3071 0 38581000 16899000 21683000 22977 2147 8651 8852 36068 36068 LPNNHIGISFIPR 13 0 1 Unmodified _LPNNHIGISFIPR_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.6179 3 493.280654 1476.82013 88971.91 0.35219 0.00017373 -0.31768 -0.00015671 0.034512 1.7024E-05 493.280136336098 496.616824763127 76.084 0.60258 76.084 75.85 76.453 0 181 49 6 0 0 0 0.037483 1 44786 21.246 21.246 1 1.5278 1.5864 0 13601000 4807400 8793300 22978 1402 8652 8853 36069 36069 LPPDVLR 7 0 1 Unmodified _LPPDVLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 410.2523 2 405.247621 808.480688 98411.11 0.2343 9.495E-05 0.65024 0.00026351 0.88454 0.00035846 405.247706753187 410.252327451212 55.965 1.3698 55.965 55.271 56.64 0 258 113 4 0 0 0 0.026656 1 31453 75.311 10.534 1 0.65758 0.66126 0 17347000 10928000 6419300 22979 1665 8653 8854 36070 36070 LPPFETFSQGPTLQFTLR 18 0 1 Unmodified _LPPFETFSQGPTLQFTLR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1045.5616 2 1040.04911 2078.08368 60956.57 0.88536 0.00092082 0.98281 0.0010222 1.8682 0.001943 1040.55093869733 1045.55629956992 126.74 0.40653 126.74 126.58 126.99 0 168 27 8 0 0 0 3.9612E-05 1 82456 61.212 61.212 1 1.0404 1.0576 0 14969000 7088300 7880400 22980 1336 8654 8855 36071 36071 LPPFETFSQGPTLQFTLR 18 0 1 Unmodified _LPPFETFSQGPTLQFTLR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1040.5554 2 1040.04911 2078.08368 60102.35 0.79792 0.00082988 1.109 0.0011534 1.9069 0.0019833 1040.55142886875 1045.55604322697 126.39 0.46661 126.39 126.21 126.68 0 180 28 8 0 0 0 4.153E-05 2 84206 60.628 60.628 1 0.95411 0.95913 0 19242000 9570700 9671300 22981 1336 8654 8855 36072;36073 36072 LPPGFSASSTVEK 13 1 0 Unmodified _LPPGFSASSTVEK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.3527 2 660.345717 1318.67688 73732.36 0.73282 0.00048391 0.4213 0.00027821 1.1541 0.00076212 660.345863192283 664.353447628605 59.374 0.61332 59.374 59.044 59.657 3.8147E-06 193 46 8 0 0 0 0.00013042 1 33857 90.05 58.629 1 1.5621 1.6836 0 33941000 13100000 20840000 22982 39 8655 8856 36074 36074 LPPGFSASSTVEK 13 1 0 Unmodified _LPPGFSASSTVEK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3531 2 660.345717 1318.67688 74355.87 0.66989 0.00044236 0.1099 7.2572E-05 0.77979 0.00051493 660.346033497717 664.353442588001 58.193 0.60604 58.193 57.919 58.525 -3.8147E-06 142 45 6 0 0 0 0.001556 1 33739 57.348 34.819 1 1.6148 1.7343 0 37411000 16910000 20501000 22983 39 8655 8856 36075 36075 LPPLPTIR 8 0 1 Unmodified _LPPLPTIR_ 0 0 0 E5KTM5;Q8WVM0 E5KTM5 E5KTM5 TFB1M Dimethyladenosine transferase 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.7967 2 453.792195 905.569838 97342.54 0.39221 0.00017798 0.92026 0.00041761 1.3125 0.00059559 453.793173688638 458.796448295579 88.94 0.22849 88.94 88.804 89.033 7.6294E-06 43 15 4 0 0 0 0.022274 1 53647 57.281 57.281 1 1.5064 1.5023 0 8698900 3681800 5017100 22984 1210 8656 8857 36076 36076 LPPLPTIR 8 0 1 Unmodified _LPPLPTIR_ 0 0 0 E5KTM5;Q8WVM0 E5KTM5 E5KTM5 TFB1M Dimethyladenosine transferase 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.7964 2 453.792195 905.569838 100521 0.73654 0.00033424 0.23926 0.00010857 0.9758 0.00044281 453.793000508676 458.79626176186 87.79 0.22664 87.79 87.662 87.889 0 44 15 4 0 0 0 0.0098384 1 54160 73.616 66.386 1 1.1392 1.132 0 8583200 3587400 4995800 22985 1210 8656 8857 36077 36077 LPPNTNDEVDEDPTGNK 17 1 0 Unmodified _LPPNTNDEVDEDPTGNK_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.9286 2 927.921234 1853.82792 64947.69 0.71202 0.0006607 0.37708 0.0003499 1.0891 0.0010106 927.921925803072 931.928511610119 40.895 0.59492 40.895 40.576 41.171 0 197 51 6 0 0 0 0.000186 1 21324 51.135 50.804 1 1.2326 1.2878 0 12151000 5329000 6822200 22986 764 8657 8858 36078 36078 LPPNTNDEVDEDPTGNK 17 1 0 Unmodified _LPPNTNDEVDEDPTGNK_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 932.4302 2 927.921234 1853.82792 64806.48 0.68155 0.00063242 0.10214 9.4775E-05 0.78369 0.0007272 928.422543350135 932.430224945372 40.081 0.6317 40.081 39.828 40.46 0 164 54 4 0 0 0 8.7041E-05 2 21193 61.375 61.375 1 1.3031 1.3111 0 16075000 5089500 10986000 22987 764 8657 8858 36079;36080 36079 LPPNTNDEVDEDPTGNK 17 1 0 Unmodified _LPPNTNDEVDEDPTGNK_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.9293 2 927.921234 1853.82792 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.788 1 39.788 39.288 40.288 0 0 0 0 0.0075849 1 21149 47.288 38.099 1 22988 764 8657 8858 36081 36081 LPPNTNDEVDEDPTGNK 17 1 0 Unmodified _LPPNTNDEVDEDPTGNK_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 927.9224 2 927.921234 1853.82792 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.872 1 39.872 39.372 40.372 0 0 0 0 2.6979E-08 1 21201 105 78.215 1 22989 764 8657 8858 36082 36082 LPPPLSAPVAGLAALK 16 1 0 Unmodified _LPPPLSAPVAGLAALK_ 0 0 0 Q14781 Q14781 Q14781 CBX2 Chromobox protein homolog 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.9695 2 757.968877 1513.9232 NaN NaN NaN -0.12131 -9.1948E-05 NaN NaN NaN NaN 120.24 0.44895 120.24 120.01 120.46 0 0 0 0 0.00046826 1 77476 67.153 43.777 1 NaN NaN 0 6521800 6521800 0 22990 1744 8658 8859 36083 36083 LPPPLSAPVAGLAALK 16 1 0 Unmodified _LPPPLSAPVAGLAALK_ 0 0 0 Q14781 Q14781 Q14781 CBX2 Chromobox protein homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.4711 2 757.968877 1513.9232 69841.94 0.81872 0.00062056 0.34341 0.0002603 1.1621 0.00088086 757.96870721499 761.97699710333 119.69 1.0066 119.69 119.01 120.01 -7.6294E-06 169 40 7 0 0 0 0.00078129 2 78913 48.004 48.004 1 0.81047 0.81608 0 13465000 8304600 5159900 22991 1744 8658 8859 36084;36085 36084 LPPQSCLLLPPTPVR 15 0 1 Unmodified _LPPQSCLLLPPTPVR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 844.9829 2 844.481825 1686.9491 68275.34 0.74653 0.00063043 -0.1838 -0.00015522 0.56273 0.00047522 844.983120305978 849.485631019773 120.76 0.77054 120.76 120.48 121.25 7.6294E-06 120 36 6 0 0 0 0.02503 1 71771 29.299 29.299 1 1.5481 1.3009 0 3105100 1211600 1893500 22992 1412 8659 8860 36086 36086 LPPQSCLLLPPTPVR 15 0 1 Unmodified _LPPQSCLLLPPTPVR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 844.4839 2 844.481825 1686.9491 68725.36 0.80588 0.00068055 -0.19918 -0.0001682 0.60671 0.00051235 844.983058256416 849.485336256156 120.49 0.62334 120.49 120.18 120.8 0 149 33 6 0 0 0 0.054764 1 70579 23.236 23.236 1 1.6931 1.4456 0 4528600 1862400 2666200 22993 1412 8659 8860 36087 36087 LPPQTLEGDPGAEGEEGTTTVR 22 0 1 Unmodified _LPPQTLEGDPGAEGEEGTTTVR_ 0 0 0 A8K5Q1;Q7L2J0 A8K5Q1 A8K5Q1 MEPCE 7SK snRNA methylphosphate capping enzyme ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1128.0472 2 1127.54532 2253.07608 NaN NaN NaN 1.4239 0.0016056 NaN NaN NaN NaN 68.198 0.26737 68.198 68.005 68.272 0 0 0 0 0.00026976 1 39483 47.037 28.306 1 NaN NaN 0 2804100 2804100 0 22994 751 8660 8861 36088 36088 LPPQTLEGDPGAEGEEGTTTVR 22 0 1 Unmodified _LPPQTLEGDPGAEGEEGTTTVR_ 0 0 0 A8K5Q1;Q7L2J0 A8K5Q1 A8K5Q1 MEPCE 7SK snRNA methylphosphate capping enzyme MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1132.5502 2 1127.54532 2253.07608 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.015 1 67.015 66.515 67.515 0 0 0 0 3.0322E-05 1 39660 64.394 56.849 1 22995 751 8660 8861 36089 36089 LPPVVPLPPPTLR 13 0 1 Unmodified _LPPVVPLPPPTLR_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.4456 2 698.439755 1394.86496 NaN NaN NaN 0.10918 7.6256E-05 NaN NaN NaN NaN 115.71 0.44933 115.71 115.56 116.01 0 0 0 0 0.028012 1 73657 43.77 36.124 1 NaN NaN 0 2181700 0 2181700 22996 12 8661 8862 36090 36090 LPPVVPLPPPTLR 13 0 1 Unmodified _LPPVVPLPPPTLR_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.4446 2 698.439755 1394.86496 NaN NaN NaN 0.33998 0.00023746 NaN NaN NaN NaN 115.15 0.41279 115.15 114.91 115.32 0 0 0 0 0.0043798 1 75014 61.65 57.184 1 NaN NaN 0 1953900 0 1953900 22997 12 8661 8862 36091 36091 LPPYSAGDGAELSTPGGK 18 1 0 Unmodified _LPPYSAGDGAELSTPGGK_ 0 0 0 Q8IUF8 Q8IUF8 Q8IUF8 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.4327 2 858.925591 1715.83663 66519.79 0.59859 0.00051415 -0.38119 -0.00032741 0.21741 0.00018674 859.426604822038 862.932339777399 68.71 0.49379 68.71 68.41 68.904 0 121 43 5 0 0 0 0.0044992 1 39728 51.875 51.875 1 0.52458 0.53909 0 10683000 6013700 4668900 22998 1891 8662 8863 36092 36092 LPQEQSQLPNPSEASTTFPESHLR 24 0 1 Unmodified _LPQEQSQLPNPSEASTTFPESHLR_ 0 0 0 D3DUZ3 D3DUZ3 D3DUZ3 IFI16 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 898.415 3 898.443701 2692.30927 66209.98 0.44747 0.00040203 0.02011 1.8068E-05 0.46758 0.00042009 899.111908568665 902.114426165794 97.844 0.42667 97.844 97.647 98.074 -7.6294E-06 153 31 7 0 0 0 0.030637 1 55163 23.79 23.79 1 1.51 1.2755 0 2995900 1456400 1539500 22999 1196 8663 8864 36093 36093 LPQEQSQLPNPSEASTTFPESHLR 24 0 1 Unmodified _LPQEQSQLPNPSEASTTFPESHLR_ 0 0 0 D3DUZ3 D3DUZ3 D3DUZ3 IFI16 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 898.4134 3 898.443701 2692.30927 66243.02 0.14762 0.00013263 0.65064 0.00058457 0.79826 0.00071719 898.778145212655 902.114993598739 97.658 0.45815 97.658 97.446 97.904 -7.6294E-06 135 27 7 0 0 0 0.030329 1 54169 23.913 23.913 1 1.3021 1.1132 0 2877800 1197600 1680200 23000 1196 8663 8864 36094 36094 LPQLPITNFSR 11 0 1 Unmodified _LPQLPITNFSR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.3659 2 643.366787 1284.71902 76714.87 0.75557 0.00048611 0.054442 3.5026E-05 0.81001 0.00052113 643.366963941142 648.370956303396 106.3 0.66653 106.3 106.01 106.67 0 170 47 5 0 0 0 0.016089 1 65863 45.997 45.997 1 1.4897 1.5305 0 25467000 9686900 15780000 23001 1504 8664 8865 36095 36095 LPQLPITNFSR 11 0 1 Unmodified _LPQLPITNFSR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.3711 2 643.366787 1284.71902 76982.65 0.75518 0.00048586 0.59949 0.00038569 1.3547 0.00087155 643.366993796856 648.371010342284 105.66 0.68797 105.66 105.32 106.01 0 198 48 7 0 0 0 0.00019291 3 67068 93.111 93.111 1 1.4706 1.5975 0 28328000 11752000 16577000 23002 1504 8664 8865 36096;36097;36098 36097 LPQLPITNFSR 11 0 1 Unmodified _LPQLPITNFSR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.3719 2 643.366787 1284.71902 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.74 1 117.74 117.24 118.24 7.6294E-06 0 0 0 0.022079 1 69420 52.579 26.064 1 23003 1504 8664 8865 36099 36099 LPQQDHTTTTDSEMEEPYLQESK 23 1 0 Oxidation (M) _LPQQDHTTTTDSEM(ox)EEPYLQESK_ LPQQDHTTTTDSEM(1)EEPYLQESK LPQQDHTTTTDSEM(54)EEPYLQESK 0 1 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;P78365 B3KPJ4 B3KPJ4 PHC2;HPH2 Polyhomeotic-like protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 911.0751 3 908.404471 2722.19158 NaN NaN NaN 0.46863 0.0004257 NaN NaN NaN NaN 46.935 0.24382 46.935 46.807 47.051 -3.8147E-06 0 0 0 1.7297E-05 1 25392 53.998 51.275 1 NaN NaN 0 9286900 0 9286900 23004 479 8665 8866 36100 36100 329 LPQTEQELK 9 1 0 Unmodified _LPQTEQELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.3041 2 543.295496 1084.57644 80815.1 0.61577 0.00033454 -0.32626 -0.00017725 0.28951 0.00015729 543.295365412002 547.302301394318 32.658 0.95213 32.658 32.249 33.201 3.8147E-06 520 89 10 0 0 0 1.3829E-11 2 16024 152.34 106.66 1 0.85187 0.96685 0 160320000 86972000 73350000 23005 2070 8666 8867 36101;36102 36101 LPQTEQELK 9 1 0 Unmodified _LPQTEQELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.2952 2 543.295496 1084.57644 80477.93 0.61076 0.00033182 -0.51381 -0.00027915 0.096948 5.2671E-05 543.295202976284 547.302049637051 32.178 1.0964 32.178 31.615 32.712 0 553 103 7 0 0 0 2.3179E-05 4 16188 115.49 79.876 1 0.84402 0.95246 0 127330000 67006000 60328000 23006 2070 8666 8867 36103;36104;36105;36106 36106 LPQTEQELK 9 1 0 Unmodified _LPQTEQELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.3024 2 543.295496 1084.57644 81911.81 0.5476 0.00029751 -0.35014 -0.00019023 0.19747 0.00010728 543.295328652846 547.302326676081 37.623 1.3161 37.623 37.131 38.447 0 527 103 10 0 0 0 0.00016983 2 16970 107.57 68.783 1 1.7295 1.4681 0 60967000 22114000 38853000 23007 2070 8666 8867 36107;36108 36108 LPQTEQELK 9 1 0 Unmodified _LPQTEQELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.3027 2 543.295496 1084.57644 81421.02 0.33052 0.00017957 -0.068039 -3.6966E-05 0.26248 0.0001426 543.295488603929 547.302491777989 37.767 1.5154 37.767 37.093 38.608 0 608 123 10 0 0 0 0.0014174 2 16441 85.676 46.884 1 1.6878 1.4176 0 49539000 17348000 32191000 23008 2070 8666 8867 36109;36110 36109 LPQVTR 6 0 1 Unmodified _LPQVTR_ 0 0 0 Q6FI97;Q53FS0;O96019;D3DNS0 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.2187 2 357.218863 712.423173 102786.9 0.18834 6.7279E-05 -0.13231 -4.7263E-05 0.056032 2.0016E-05 357.218732725262 362.222827862827 27.199 0.49243 27.199 26.946 27.438 0 84 24 5 0 0 0 0.022456 1 12419 131.65 21.482 1 0.75847 0.7759 0 33965000 19504000 14461000 23009 1434 8667 8868 36111 36111 LPQVTR 6 0 1 Unmodified _LPQVTR_ 0 0 0 Q6FI97;Q53FS0;O96019;D3DNS0 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 357.2183 2 357.218863 712.423173 101210 0.6854 0.00024484 -0.13202 -4.7159E-05 0.55338 0.00019768 357.218709666497 362.222857103828 26.825 0.42718 26.825 26.607 27.034 -1.9073E-06 74 19 5 0 0 0 0.035157 1 12166 115.83 17.899 1 0.77538 0.87645 0 47442000 27338000 20104000 23010 1434 8667 8868 36112 36112 LPQYLER 7 0 1 Unmodified _LPQYLER_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.7591 2 459.75581 917.497067 85967.26 0.5168 0.0002376 -0.25385 -0.00011671 0.26295 0.00012089 459.756084864801 464.759344429783 48.55 0.47519 48.55 48.273 48.748 0 95 33 4 0 0 0 0.026682 1 27197 76.035 50.208 1 1.5385 1.6613 0 26549000 8221600 18327000 23011 305 8668 8869 36113 36113 LPRPLTSSASAIR 13 0 2 Unmodified _LPRPLTSSASAIR_ 0 0 1 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.6088 3 456.936776 1367.7885 89442.86 0.13212 6.0369E-05 -0.82418 -0.0003766 -0.69206 -0.00031623 456.936811832534 463.608813320378 49.6 0.42031 49.6 49.384 49.804 0 113 33 6 0 0 0 3.7778E-05 2 27899 94.09 72.331 1 0.81707 0.93116 0 40373000 22250000 18122000 23012 590 8669 8870 36114;36115 36115 LPSAVAVSASALSAPLR 17 0 1 Unmodified _LPSAVAVSASALSAPLR_ 0 0 0 REV__D3DSN3 REV__D3DSN3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.9727 2 805.467229 1608.91991 65442.7 0.29092 0.00023432 0.94637 0.00076227 1.2373 0.00099659 805.46840742197 810.972731246187 129.21 0.2377 129.21 129.07 129.31 0 54 18 4 0 0 0 0.0018751 1 84212 55.314 44.102 1 1.4654 1.4991 0 26342000 9011700 17331000 + 23013 2173 8670 8871 36116 36116 LPSAVAVSASALSAPLR 17 0 1 Unmodified _LPSAVAVSASALSAPLR_ 0 0 0 REV__D3DSN3 REV__D3DSN3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.9727 2 805.467229 1608.91991 65442.7 0.29092 0.00023432 0.94637 0.00076227 1.2373 0.00099659 805.46840742197 810.972731246187 129.21 0.2377 129.21 129.07 129.31 0 54 18 4 0 0 0 0.027824 1 84212 55.314 55.314 1 1.4654 1.4991 0 26342000 9011700 17331000 + 23014 2173 8670 8871 36117 36117 LPSAVAVSASALSAPLR 17 0 1 Unmodified _LPSAVAVSASALSAPLR_ 0 0 0 REV__D3DSN3 REV__D3DSN3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.4743 2 805.467229 1608.91991 NaN NaN NaN 0.59196 0.00047681 NaN NaN NaN NaN 128.78 0.22791 128.78 128.66 128.89 1.5259E-05 0 0 0 0.017107 1 86000 40.727 16.877 1 NaN NaN 0 12619000 0 12619000 + 23015 2173 8670 8871 36118 36118 LPSDVVTGYLALR 13 0 1 Unmodified _LPSDVVTGYLALR_ 0 0 0 K7EQ79;Q6PI98;K7EIY8 K7EQ79 K7EQ79 INO80C INO80 complex subunit C MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3401 2 702.398284 1402.78202 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.87 1 111.87 111.37 112.37 7.6294E-06 0 0 0 0.010062 1 70509 54.198 28.576 1 23016 1345 8671 8872 36119 36119 LPSEGPRPAHVVVGDVLQAADVDK 24 1 1 Unmodified _LPSEGPRPAHVVVGDVLQAADVDK_ 0 0 1 V9HWI1;P30043;M0QZL1;M0R192 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8381 4 618.082861 2468.30234 78897.08 0.53684 0.00033181 -1.0097 -0.00062407 -0.47284 -0.00029225 618.331941906323 622.838828577096 92.542 0.36052 92.542 92.438 92.799 0 63 28 5 0 0 0 0.0016834 1 57359 24.068 20.541 1 3.9611 4.4811 0 15899000 5694300 10205000 23017 1528 8672 8873 36120 36120 LPSEGPRPAHVVVGDVLQAADVDK 24 1 1 Unmodified _LPSEGPRPAHVVVGDVLQAADVDK_ 0 0 1 V9HWI1;P30043;M0QZL1;M0R192 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.8406 4 618.082861 2468.30234 NaN NaN NaN 1.3122 0.00081106 NaN NaN NaN NaN 103.59 0.34337 103.59 103.43 103.77 0 0 0 0 0.0057813 1 58933 29.158 25.696 1 NaN NaN 0 3789700 0 3789700 23018 1528 8672 8873 36121 36121 LPSFELLHK 9 1 0 Unmodified _LPSFELLHK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 361.8782 3 361.878087 1082.61243 98685.02 -0.23441 -8.4826E-05 0.21482 7.7738E-05 -0.019588 -7.0884E-06 361.878112794468 364.549434725944 81.373 0.65176 81.373 81.079 81.73 0 277 56 8 0 0 0 0.0027664 2 48343 53.327 53.327 1 0.71986 0.81433 0 102820000 59757000 43064000 23019 1770 8673 8874 36122;36123 36123 LPSFELLHK 9 1 0 Unmodified _LPSFELLHK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.314 2 542.313492 1082.61243 82726.13 0.39441 0.0002139 -0.7061 -0.00038293 -0.31169 -0.00016903 542.313554473129 546.320772084957 81.433 0.7711 81.433 81.102 81.873 0 360 66 8 0 0 0 0.0010726 1 48488 90.37 77.103 1 0.83246 0.93445 0 67583000 38665000 28918000 23020 1770 8673 8874 36124 36124 LPSFELLHK 9 1 0 Unmodified _LPSFELLHK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 361.8782 3 361.878087 1082.61243 99447.74 0.4357 0.00015767 -0.10277 -3.7191E-05 0.33292 0.00012048 361.877994549489 364.549342638722 79.986 0.62537 79.986 79.682 80.307 0 299 49 8 0 0 0 0.006632 2 48498 43.282 43.282 1 0.72406 0.8292 0 163060000 93449000 69607000 23021 1770 8673 8874 36125;36126 36125 LPSFELLHK 9 1 0 Unmodified _LPSFELLHK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.3141 2 542.313492 1082.61243 83909.34 0.76722 0.00041607 -0.013319 -7.2229E-06 0.7539 0.00040885 542.313442335567 546.320575823942 79.985 0.62276 79.985 79.693 80.316 0 224 49 6 0 0 0 4.3603E-06 1 48611 133.33 114.55 1 0.72426 0.80951 0 87684000 51283000 36401000 23022 1770 8673 8874 36127 36127 LPSFELLHK 9 1 0 Unmodified _LPSFELLHK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.3209 2 542.313492 1082.61243 81164.89 0.62378 0.00033828 -0.26495 -0.00014369 0.35883 0.0001946 542.313462733795 546.320598959437 92.58 0.73901 92.58 92.331 93.07 0 139 42 6 0 0 0 0.0010484 2 51497 90.709 75.047 1 1.2779 1.0137 0 18848000 8475800 10372000 23023 1770 8673 8874 36128;36129 36128 LPSFELLHK 9 1 0 Unmodified _LPSFELLHK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.3201 2 542.313492 1082.61243 81826.76 0.36287 0.00019679 -0.61945 -0.00033594 -0.25658 -0.00013915 542.313373193577 546.320462043269 92.245 0.69329 92.245 91.997 92.69 7.6294E-06 145 35 6 0 0 0 0.0019674 2 50437 78.516 60.531 1 1.4513 1.1944 0 10345000 3943800 6400900 23024 1770 8673 8874 36130;36131 36130 LPSGAYEGGALIK 13 1 0 Unmodified _LPSGAYEGGALIK_ 0 0 0 Q12873;B4DLC6 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8523 2 638.350803 1274.68705 78495.02 0.18641 0.000119 0.44345 0.00028308 0.62987 0.00040208 638.350910465545 642.358233588039 72.471 0.54813 72.471 72.231 72.78 0 145 39 6 0 0 0 0.0019556 2 42405 55.721 42.197 1 0.64255 0.65198 0 13471000 7866900 5604300 23025 1701 8674 8875 36132;36133 36133 LPSGAYEGGALIK 13 1 0 Unmodified _LPSGAYEGGALIK_ 0 0 0 Q12873;B4DLC6 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.3581 2 638.350803 1274.68705 77614.77 0.61411 0.00039202 0.04258 2.7181E-05 0.65669 0.0004192 638.351047205078 642.357830429171 83.166 0.51923 83.166 82.881 83.4 0 124 29 6 0 0 0 0.001605 1 44420 57.149 47.352 1 1.7444 1.4146 0 2792000 1029800 1762300 23026 1701 8674 8875 36134 36134 LPSGEVVSIGQLASLAQRPVANAGGSK 27 1 1 Unmodified _LPSGEVVSIGQLASLAQRPVANAGGSK_ 0 0 1 A0A0A0MS59;Q6ZRS2;A0A087X0E3;B3KN63 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 875.4884 3 869.480198 2605.41876 66499.75 0.43668 0.00037968 0.569 0.00049473 1.0057 0.00087441 870.149142129323 875.82251292846 124.35 0.4585 124.35 124.03 124.49 0 66 18 6 0 0 0 0.038493 1 73546 16.621 16.621 1 1.2594 1.0584 0 4653700 1983200 2670500 23027 476 8675 8876 36135 36135 LPSGSGAASPTGSAVDIR 18 0 1 Unmodified _LPSGSGAASPTGSAVDIR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.9225 2 821.923383 1641.83221 68462.45 0.70289 0.00057772 -0.032857 -2.7006E-05 0.67003 0.00055071 822.424721705135 827.42922351948 59.826 0.73353 59.826 59.476 60.21 3.8147E-06 205 61 6 0 0 0 6.9723E-06 2 34003 110.55 110.55 1 4.0984 4.2898 0 39049000 9631000 29418000 23028 1696 8676 8877 36136;36137 36137 LPSGSGAASPTGSAVDIR 18 0 1 Unmodified _LPSGSGAASPTGSAVDIR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.9229 2 821.923383 1641.83221 67061.75 1.0705 0.00087985 -0.062047 -5.0998E-05 1.0084 0.00082885 821.923355308003 827.429206724724 58.781 0.84699 58.781 58.329 59.176 0 207 76 5 0 0 0 1.78E-06 2 34187 120.29 120.29 1 2.7599 3.2083 0 59753000 10998000 48755000 23029 1696 8676 8877 36138;36139 36138 LPSGSGAASPTGSAVDIR 18 0 1 Unmodified _LPSGSGAASPTGSAVDIR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.4287 2 821.923383 1641.83221 68390.08 0.55411 0.00045544 0.16439 0.00013512 0.7185 0.00059055 821.923537332236 826.927628552548 70.16 0.42958 70.16 69.948 70.378 0 121 38 4 0 0 0 0.0010485 2 36140 50.897 50.897 1 1.2602 1.0799 0 3321400 1833800 1487600 23030 1696 8676 8877 36140;36141 36141 LPSGVFSLEFQDFVNK 16 1 0 Unmodified _LPSGVFSLEFQDFVNK_ 0 0 0 B4DFY5;A4QPA9;Q02750;H3BRW9 B4DFY5 B4DFY5 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.9766 2 913.969802 1825.92505 NaN NaN NaN -1.3436 -0.001228 NaN NaN NaN NaN 126.22 0.27925 126.22 126.08 126.36 0 0 0 0 1.2326E-06 1 82092 89.231 66.756 1 NaN NaN 0 5814700 0 5814700 23031 674 8677 8878 36142 36142 LPSGVFSLEFQDFVNK 16 1 0 Unmodified _LPSGVFSLEFQDFVNK_ 0 0 0 B4DFY5;A4QPA9;Q02750;H3BRW9 B4DFY5 B4DFY5 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 917.9751 2 913.969802 1825.92505 65448.99 0.84283 0.00077033 -0.89368 -0.0008168 -0.05085 -4.6476E-05 914.474897665248 917.974970725149 125.81 0.29928 125.81 125.67 125.97 7.6294E-06 79 17 7 0 0 0 2.9245E-12 1 83846 141.37 132.63 1 3.7353 3.7767 0 8780000 1677300 7102700 23032 674 8677 8878 36143 36143 LPSIPLVPVSAQK 13 1 0 Unmodified _LPSIPLVPVSAQK_ 0 0 0 Q15785;B4DXU3 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.4158 2 674.91357 1347.81259 77627.19 0.46996 0.00031718 0.062392 4.2109E-05 0.53235 0.00035929 674.913482454912 678.920691776808 109.82 0.44592 109.82 109.54 109.99 0 122 33 6 0 0 0 0.011045 1 68754 40.994 39.15 1 2.542 2.6282 0 14693000 4732500 9960000 23033 1765 8678 8879 36144 36144 LPSIPLVPVSAQK 13 1 0 Unmodified _LPSIPLVPVSAQK_ 0 0 0 Q15785;B4DXU3 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.9146 2 674.91357 1347.81259 76606.45 0.73687 0.00049732 -0.62683 -0.00042306 0.11004 7.4267E-05 674.913060569272 678.920327365422 109.2 0.39421 109.2 108.98 109.37 7.6294E-06 95 27 5 0 0 0 0.0012243 1 69969 58.699 58.699 1 2.6205 2.6766 0 11984000 3317400 8666400 23034 1765 8678 8879 36145 36145 LPSLALPEGLGEPQGPEGPGGR 22 0 1 Unmodified _LPSLALPEGLGEPQGPEGPGGR_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1064.551 2 1064.55529 2127.09603 59522.48 0.76247 0.0008117 -0.87291 -0.00092926 -0.11043 -0.00011756 1065.05597223697 1070.05964338029 112.69 0.38953 112.69 112.53 112.92 0 190 29 8 0 0 0 8.0986E-08 1 71129 63.185 63.185 1 0.92468 0.94319 0 30651000 15705000 14946000 23035 1781 8679 8880 36146 36146 LPSLALPEGLGEPQGPEGPGGR 22 0 1 Unmodified _LPSLALPEGLGEPQGPEGPGGR_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1069.5586 2 1064.55529 2127.09603 59729.25 0.75229 0.00080085 -0.93597 -0.00099639 -0.18368 -0.00019554 1065.05628333584 1069.55868705752 112.17 0.40816 112.17 111.99 112.4 0 196 31 9 0 0 0 2.7936E-11 2 72493 92.265 92.265 1 0.89009 0.97475 0 32179000 16988000 15190000 23036 1781 8679 8880 36147;36148 36148 LPSLALPEGLGEPQGPEGPGGR 22 0 1 Unmodified _LPSLALPEGLGEPQGPEGPGGR_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1070.0609 2 1064.55529 2127.09603 58572.38 0.37654 0.00040085 -0.64569 -0.00068737 -0.26914 -0.00028652 1065.05676663344 1069.55803592369 123.78 0.62784 123.78 123.56 124.19 -7.6294E-06 165 26 11 0 0 0 6.2505E-07 1 73992 52.599 52.599 1 1.4237 1.1665 0 16654000 7064000 9590100 23037 1781 8679 8880 36149 36149 LPSLALPEGLGEPQGPEGPGGR 22 0 1 Unmodified _LPSLALPEGLGEPQGPEGPGGR_ 0 0 0 Q4VC44 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1065.0575 2 1064.55529 2127.09603 59068.45 0.27534 0.00029311 0.17957 0.00019116 0.45491 0.00048427 1065.05740962088 1070.06083100025 123.62 0.67447 123.62 123.41 124.08 0 149 25 11 0 0 0 2.7666E-07 2 72998 58.794 58.794 1 1.3096 1.0862 0 15151000 6664300 8486700 23038 1781 8679 8880 36150;36151 36151 LPSLGAGFSQGLK 13 1 0 Unmodified _LPSLGAGFSQGLK_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8;E7EV54;B4DEX7 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8581 2 637.858795 1273.70304 NaN NaN NaN 0.20217 0.00012896 NaN NaN NaN NaN 94.202 0.44981 94.202 93.842 94.292 0 0 0 0 0.01934 1 57186 48.284 26.434 1 NaN NaN 0 7697200 7697200 0 23039 746 8680 8881 36152 36152 LPSLGAGFSQGLK 13 1 0 Unmodified _LPSLGAGFSQGLK_ 0 0 0 O15451;A8K548;C9JFV4;B4DR36;Q8IZL8;E7EV54;B4DEX7 O15451 O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3598 2 637.858795 1273.70304 78017.34 0.73403 0.00046821 -0.31773 -0.00020267 0.41629 0.00026554 638.360414990898 642.367252652909 93.247 0.24268 93.247 93.192 93.435 0 41 20 4 0 0 0 0.0028283 1 57821 52.167 52.167 1 0.87759 0.89757 0 9353600 4284500 5069100 23040 746 8680 8881 36153 36153 LPSNLPQLQNLIK 13 1 0 Unmodified _LPSNLPQLQNLIK_ 0 0 0 E7EW05;B4DT66;Q9NVU7;F8W8T7;D6RC74 E7EW05 E7EW05 SDAD1 Protein SDA1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.4406 2 739.440483 1476.86641 73335.3 0.96653 0.00071469 -0.29503 -0.00021816 0.6715 0.00049653 739.440060624658 743.948952151266 114.85 0.42278 114.85 114.66 115.08 0 90 26 5 0 0 0 0.0026754 1 72896 52.79 52.79 1 0.76124 0.75543 0 8163400 4254100 3909300 23041 1032 8681 8882 36154 36154 LPSNLPQLQNLIK 13 1 0 Unmodified _LPSNLPQLQNLIK_ 0 0 0 E7EW05;B4DT66;Q9NVU7;F8W8T7;D6RC74 E7EW05 E7EW05 SDAD1 Protein SDA1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.4406 2 739.440483 1476.86641 73598.66 0.93209 0.00068922 -0.28917 -0.00021383 0.64291 0.0004754 739.941853940539 743.447530869124 114.33 0.32439 114.33 114.16 114.48 -7.6294E-06 92 22 5 0 0 0 0.00024044 1 74251 68.536 56.329 1 0.6862 0.71049 0 9783000 5496900 4286100 23042 1032 8681 8882 36155 36155 LPSNLPQLQNLIK 13 1 0 Unmodified _LPSNLPQLQNLIK_ 0 0 0 E7EW05;B4DT66;Q9NVU7;F8W8T7;D6RC74 E7EW05 E7EW05 SDAD1 Protein SDA1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.4496 2 739.440483 1476.86641 72214.98 0.84115 0.00062198 0.052022 3.8467E-05 0.89318 0.00066045 739.440445168016 743.447613104594 126.76 0.41708 126.76 126.57 126.98 -7.6294E-06 95 16 8 0 0 0 0.0032495 1 76261 50.452 37.496 1 0.91331 0.73033 0 8873000 4665400 4207600 23043 1032 8681 8882 36156 36156 LPSNTLDR 8 0 1 Unmodified _LPSNTLDR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2483 2 458.248349 914.482145 89586.92 0.51664 0.00023675 0.14177 6.4967E-05 0.65841 0.00030172 458.248371615222 463.252398827175 28.691 0.47063 28.691 28.513 28.983 0 120 25 8 0 0 0 0.010016 2 13620 73.208 34.371 1 0.64154 0.71607 0 85437000 52557000 32880000 23044 1665 8682 8883 36157;36158 36157 LPSNTLDR 8 0 1 Unmodified _LPSNTLDR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.2484 2 458.248349 914.482145 93007.13 0.22096 0.00010126 0.078549 3.5995E-05 0.29951 0.00013725 458.248398656886 463.252282392629 28.124 0.61347 28.124 27.907 28.52 0 113 37 8 0 0 0 0.0078439 2 13323 81.191 36.42 1 0.66088 0.75637 0 86188000 52679000 33509000 23045 1665 8682 8883 36159;36160 36160 LPSNTLDR 8 0 1 Unmodified _LPSNTLDR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 458.2482 2 458.248349 914.482145 88047.03 0.035501 1.6268E-05 0.3519 0.00016126 0.3874 0.00017752 458.248385377339 463.252607105713 32.263 0.69058 32.263 32.003 32.694 0 139 35 7 0 0 0 0.01739 1 13352 60.478 19.175 1 0.41503 0.33529 0 11454000 8032400 3422000 23046 1665 8682 8883 36161 36161 LPSRPGAQGVEPQNLR 16 0 2 Unmodified _LPSRPGAQGVEPQNLR_ 0 0 1 A0A0U1RRM1;Q8WXI9;B3KSZ4 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.6494 3 573.648065 1717.92237 80016.67 0.60736 0.00034841 0.2054 0.00011783 0.81277 0.00046624 573.648167172455 580.320249328184 44.113 0.47868 44.113 43.868 44.347 0 246 43 8 0 0 0 7.0742E-09 2 23619 77.13 77.13 1 0.72831 0.79308 0 79476000 45222000 34254000 23047 591 8683 8884 36162;36163 36163 LPSRPGAQGVEPQNLR 16 0 2 Unmodified _LPSRPGAQGVEPQNLR_ 0 0 1 A0A0U1RRM1;Q8WXI9;B3KSZ4 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.9829 3 573.648065 1717.92237 78954.98 0.63316 0.00036321 -0.095031 -5.4514E-05 0.53813 0.0003087 573.647960560416 580.320230878147 42.955 0.47166 42.955 42.743 43.214 0 207 37 8 0 0 0 1.0244E-12 1 23203 105.28 105.28 1 0.64281 0.75171 0 110440000 63902000 46534000 23048 591 8683 8884 36164 36164 LPSRPGAQGVEPQNLR 16 0 2 Unmodified _LPSRPGAQGVEPQNLR_ 0 0 1 A0A0U1RRM1;Q8WXI9;B3KSZ4 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.3207 3 573.648065 1717.92237 78569.52 0.2166 0.00012425 0.32682 0.00018748 0.54342 0.00031173 573.648142094356 580.320548539429 51.493 0.46131 51.493 51.277 51.739 3.8147E-06 218 33 9 0 0 0 0.01166 2 25315 26.89 26.89 1 1.9872 1.6802 0 9596800 3133500 6463300 23049 591 8683 8884 36165;36166 36165 LPSRPGAQGVEPQNLR 16 0 2 Unmodified _LPSRPGAQGVEPQNLR_ 0 0 1 A0A0U1RRM1;Q8WXI9;B3KSZ4 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.3204 3 573.648065 1717.92237 79476.85 0.23261 0.00013344 0.12626 7.2429E-05 0.35887 0.00020586 573.647962043077 580.320450218221 51.921 0.48469 51.921 51.654 52.139 0 213 35 8 0 0 0 0.0031579 1 24945 26.808 26.808 1 1.9864 1.8099 0 7468500 2627500 4841000 23050 591 8683 8884 36167 36167 LPSSVFASEFEEDVGLLNK 19 1 0 Unmodified _LPSSVFASEFEEDVGLLNK_ 0 0 0 Q96GA3;B4DTT8 Q96GA3 Q96GA3 LTV1 Protein LTV1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1041.0259 2 1041.0255 2080.03645 62787.2 0.91184 0.00094925 -0.63964 -0.00066588 0.27219 0.00028336 1041.52655007117 1045.03223035532 126.61 0.38156 126.61 126.49 126.87 0 93 27 6 0 0 0 2.115E-05 2 82369 80.469 70.681 1 0.8807 0.89448 0 6230700 3404300 2826400 23051 1966 8684 8885 36168;36169 36168 LPSVALLLNDLK 12 1 0 Unmodified _LPSVALLLNDLK_ 0 0 0 Q9H8V3;Q96SJ9 Q9H8V3 Q9H8V3 ECT2 Protein ECT2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.4075 2 648.400295 1294.78604 NaN NaN NaN -0.35078 -0.00022745 NaN NaN NaN NaN 129.09 0.18843 129.09 128.97 129.16 0 0 0 0 4.4311E-20 1 84190 137.89 101.47 1 NaN NaN 0 4757800 0 4757800 23052 2043 8685 8886 36170 36170 LPSVALLLNDLK 12 1 0 Unmodified _LPSVALLLNDLK_ 0 0 0 Q9H8V3;Q96SJ9 Q9H8V3 Q9H8V3 ECT2 Protein ECT2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.408 2 648.400295 1294.78604 NaN NaN NaN -0.3483 -0.00022584 NaN NaN NaN NaN 128.66 0.14537 128.66 128.58 128.73 0 0 0 0 2.1627E-29 1 85969 155.53 129.55 1 NaN NaN 0 7812800 0 7812800 23053 2043 8685 8886 36171 36171 LPTFGAPEQLVDLK 14 1 0 Unmodified _LPTFGAPEQLVDLK_ 0 0 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.4335 2 764.424499 1526.83444 70419.34 0.81056 0.00061961 0.12482 9.5414E-05 0.93538 0.00071503 764.424428882494 768.431699421214 115.07 0.53582 115.07 114.84 115.38 0 165 34 8 0 0 0 3.2513E-06 2 73096 103.08 103.08 1 2.1008 2.0591 0 20911000 6505600 14405000 23054 1731;1802 8686 8887 36172;36173 36173 LPTFGAPEQLVDLK 14 1 0 Unmodified _LPTFGAPEQLVDLK_ 0 0 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.424 2 764.424499 1526.83444 70714.13 0.69942 0.00053465 0.22247 0.00017006 0.92189 0.00070471 764.424490064248 768.431839674247 114.58 0.56097 114.58 114.36 114.92 0 152 34 7 0 0 0 0.0001556 2 74482 75.819 75.819 1 1.9948 2.1056 0 23691000 8894900 14796000 23055 1731;1802 8686 8887 36174;36175 36175 LPTFGAPEQLVDLK 14 1 0 Unmodified _LPTFGAPEQLVDLK_ 0 0 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.9266 2 764.424499 1526.83444 72589.05 0.79172 0.00060521 0.32612 0.00024929 1.1178 0.00085451 764.926003177359 768.431937609676 126.75 0.59615 126.75 126.42 127.02 -7.6294E-06 112 22 8 0 0 0 0.014175 2 76223 35.594 35.594 1 1.464 1.1612 0 4475600 1814900 2660800 23056 1731;1802 8686 8887 36176;36177 36177 LPTFGAPEQLVDLK 14 1 0 Unmodified _LPTFGAPEQLVDLK_ 0 0 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.4313 2 764.424499 1526.83444 71059.2 0.75867 0.00057994 0.22646 0.00017311 0.98512 0.00075305 764.424481397945 768.431777611226 126.58 0.52979 126.58 126.32 126.85 0 99 22 7 0 0 0 0.0017349 2 75162 51.569 51.569 1 1.4892 1.2186 0 4847500 2232500 2615000 23057 1731;1802 8686 8887 36178;36179 36178 LPTGAQQHSILLLLNR 16 0 1 Unmodified _LPTGAQQHSILLLLNR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.3529 3 592.015977 1773.0261 79496.09 0.79199 0.00046887 -0.16913 -0.00010013 0.62286 0.00036874 592.350335125133 595.351818706317 101.57 0.714 101.57 101.29 102 0 190 56 5 0 0 0 0.0023767 1 62568 34.498 34.498 1 0.84177 0.85357 0 15134000 8337500 6797000 23058 1699 8687 8888 36180 36180 LPTGAQQHSILLLLNR 16 0 1 Unmodified _LPTGAQQHSILLLLNR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.6868 3 592.015977 1773.0261 80011.08 0.95396 0.00056476 0.17497 0.00010358 1.1289 0.00066834 592.350184849842 595.352411802982 113.44 0.36082 113.44 113.24 113.6 0 102 18 8 0 0 0 4.7416E-05 1 66064 53.169 53.169 1 1.2097 1.0366 0 6110000 2863900 3246100 23059 1699 8687 8888 36181 36181 LPTGAQQHSILLLLNR 16 0 1 Unmodified _LPTGAQQHSILLLLNR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.353 3 592.015977 1773.0261 81238.95 0.65289 0.00038652 0.22919 0.00013569 0.88208 0.00052221 592.350341331388 595.352262879841 113.25 0.36894 113.25 112.96 113.33 0 92 19 6 0 0 0 0.0071393 1 65027 23.336 23.336 1 1.3188 1.0991 0 6835500 2738400 4097100 23060 1699 8687 8888 36182 36182 LPTIDPNTR 9 0 1 Unmodified _LPTIDPNTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.7871 2 513.782556 1025.55056 NaN NaN NaN -0.37854 -0.00019449 NaN NaN NaN NaN 53.045 1.0535 53.045 52.529 53.582 3.8147E-06 0 0 0 0.029064 1 29354 53.775 33.254 1 NaN NaN 0 145370000 0 145370000 23061 1183 8688 8889 36183 36183 LPTIDPNTR 9 0 1 Unmodified _LPTIDPNTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7827 2 513.782556 1025.55056 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.438 1 53.438 52.938 53.938 3.8147E-06 0 0 0 0.022693 1 29890 55.37 29.431 1 23062 1183 8688 8889 36184 36184 LPTIDPNTR 9 0 1 Unmodified _LPTIDPNTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.7828 2 513.782556 1025.55056 84109.55 0.30913 0.00015883 -0.092748 -4.7652E-05 0.21639 0.00011118 513.782511882267 518.786547639671 51.858 1.1687 51.858 51.315 52.484 3.8147E-06 510 91 8 0 0 0 0.0018009 2 29258 80.684 41.877 1 1.1514 1.3375 0 358740000 173210000 185530000 23063 1183 8688 8889 36185;36186 36186 LPTIDPNTR 9 0 1 Unmodified _LPTIDPNTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.787 2 513.782556 1025.55056 82993.43 0.31783 0.0001633 -0.078439 -4.0301E-05 0.23939 0.00012299 513.782455670782 518.786567775905 60.743 0.94897 60.743 60.39 61.339 0 426 81 8 0 0 0 0.015061 2 30959 55.112 30.293 1 1.5629 1.3449 0 52427000 19833000 32594000 23064 1183 8688 8889 36187;36188 36188 LPTIDPNTR 9 0 1 Unmodified _LPTIDPNTR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.7864 2 513.782556 1025.55056 84064.46 0.20145 0.0001035 0.0013834 7.1078E-07 0.20283 0.00010421 513.782467863174 518.786622070584 61.214 1.3528 61.214 60.819 62.172 0 486 110 8 0 0 0 0.04753 1 30951 39.022 22.819 1 1.564 1.3642 0 40893000 15751000 25142000 23065 1183 8688 8889 36189 36189 LPTSGADPLCR 11 0 1 Unmodified _LPTSGADPLCR_ 0 0 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.7963 2 593.79788 1185.58121 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.047 1 54.047 53.547 54.547 3.8147E-06 0 0 0 0.04208 1 30331 44.425 31.388 1 23066 1879 8689 8890 36190 36190 LPTTAQQEDPEK 12 1 0 Unmodified _LPTTAQQEDPEK_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0;B3KPY2;B3KP60;I3L1A7;I3L287 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.8428 2 678.835714 1355.65687 76429.13 0.68488 0.00046492 0.17292 0.00011738 0.8578 0.0005823 679.33739390827 682.842741540247 26.33 0.32858 26.33 26.16 26.489 0 70 21 4 0 0 0 8.9209E-18 2 11753 141.08 130.16 1 1.0456 1.0975 0 15267000 6205200 9061300 23067 1781 8690 8891 36191;36192 36191 LPTTAQQEDPEK 12 1 0 Unmodified _LPTTAQQEDPEK_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0;B3KPY2;B3KP60;I3L1A7;I3L287 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.3446 2 678.835714 1355.65687 76711.92 0.77648 0.0005271 0.080123 5.439E-05 0.85661 0.00058149 678.835859305462 682.842549928364 26.022 0.30775 26.022 25.877 26.185 0 56 15 6 0 0 0 3.1476E-08 1 11523 118.28 105.75 1 1.2329 1.2307 0 14510000 6674800 7835300 23068 1781 8690 8891 36193 36193 LPTTAQQEDPEK 12 1 0 Unmodified _LPTTAQQEDPEK_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0;B3KPY2;B3KP60;I3L1A7;I3L287 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.8362 2 678.835714 1355.65687 74482.2 0.42763 0.00029029 0.13295 9.0249E-05 0.56058 0.00038054 678.835816231205 682.842637713358 30.124 0.38218 30.124 29.867 30.249 0 119 26 6 0 0 0 0.057368 1 12362 31.431 31.431 1 1.3192 1.0602 0 2838700 1234900 1603800 23069 1781 8690 8891 36194 36194 LPTTAQQEDPEK 12 1 0 Unmodified _LPTTAQQEDPEK_ 0 0 0 Q4VC44;I3L188;J3KNW1;B3KRZ0;B3KPY2;B3KP60;I3L1A7;I3L287 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.8357 2 678.835714 1355.65687 73971.64 0.31206 0.00021184 0.29667 0.00020139 0.60872 0.00041322 678.835866697351 682.842838137964 30.326 0.6557 30.325 30.154 30.81 -1.9073E-06 125 39 7 0 0 0 0.009173 1 12036 47.302 47.302 1 1.2562 0.9927 0 2315800 1082700 1233100 23070 1781 8690 8891 36195 36195 LPVACPNQCGVGTVAR 16 0 1 Unmodified _LPVACPNQCGVGTVAR_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;B4DUU9;F6SA91 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.9238 2 849.924348 1697.83414 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.406 1 61.406 60.906 61.906 3.8147E-06 0 0 0 0.005129 1 35973 51.841 37.683 1 23071 11 8691 8892 36196 36196 LPVATIFTTHATLLGR 16 0 1 Unmodified _LPVATIFTTHATLLGR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z8P0 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.3378 3 571.001557 1709.98284 83336.58 1.1378 0.00064967 0.15486 8.8426E-05 1.2926 0.00073809 571.336282477215 574.337557194153 111.52 0.58346 111.52 111.3 111.89 0 146 43 6 0 0 0 8.5123E-06 2 70296 85.469 85.469 1 0.38474 0.38978 0 18039000 13847000 4192100 23072 1479 8692 8893 36197;36198 36197 LPVATIFTTHATLLGR 16 0 1 Unmodified _LPVATIFTTHATLLGR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z8P0 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.3378 3 571.001557 1709.98284 81633.35 0.64469 0.00036812 -0.12752 -7.2813E-05 0.51717 0.0002953 571.001397902706 574.337512573224 110.76 0.55759 110.76 110.5 111.05 0 162 42 5 0 0 0 8.8845E-05 2 71237 55.755 55.755 1 0.38686 0.38138 0 13032000 9214400 3817100 23073 1479 8692 8893 36199;36200 36199 LPVATIFTTHATLLGR 16 0 1 Unmodified _LPVATIFTTHATLLGR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z8P0 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.3381 3 571.001557 1709.98284 80484.65 0.72653 0.00041485 -0.13062 -7.4582E-05 0.59592 0.00034027 571.001364550222 574.671800848212 122.04 0.47089 122.04 121.81 122.28 0 106 22 7 0 0 0 0.0039854 2 72656 32.191 32.191 1 0.45933 0.37647 0 12703000 8914200 3788400 23074 1479 8692 8893 36201;36202 36201 LPVATIFTTHATLLGR 16 0 1 Unmodified _LPVATIFTTHATLLGR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z8P0 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.3362 3 571.001557 1709.98284 79884.22 0.74613 0.00042604 -0.19229 -0.0001098 0.55385 0.00031625 571.335678405954 574.337396609135 121.78 0.41582 121.78 121.53 121.94 0 105 19 8 0 0 0 4.0644E-05 2 71622 76.82 76.82 1 0.47646 0.38459 0 10897000 7732900 3163600 23075 1479 8692 8893 36203;36204 36204 LPVDFSNIPTYLLK 14 1 0 Unmodified _LPVDFSNIPTYLLK_ 0 0 0 A2NFR5;F8W733;Q6ZWH1;Q9NXR7 A2NFR5 A2NFR5 Hin-3;BRE BRCA1-A complex subunit BRE MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.4648 2 810.455799 1618.89705 68729.79 0.90807 0.00073595 -1.5271 -0.0012376 -0.61902 -0.00050169 810.957618246324 814.96478281397 128.04 0.37738 128.04 127.83 128.21 0 111 22 8 0 0 0 2.6687E-05 2 83439 96.64 96.64 1 0.7767 0.77971 0 7488400 3825000 3663400 23076 652 8693 8894 36205;36206 36206 LPVDFSNIPTYLLK 14 1 0 Unmodified _LPVDFSNIPTYLLK_ 0 0 0 A2NFR5;F8W733;Q6ZWH1;Q9NXR7 A2NFR5 A2NFR5 Hin-3;BRE BRCA1-A complex subunit BRE MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.9646 2 810.455799 1618.89705 68619.04 0.86461 0.00070073 -1.3591 -0.0011015 -0.49448 -0.00040076 810.455716896971 814.462835609722 127.73 0.35622 127.73 127.52 127.87 0 100 22 8 0 0 0 5.6388E-05 2 85264 92.112 92.112 1 0.81108 0.84475 0 10004000 5348100 4655600 23077 652 8693 8894 36207;36208 36208 LPVDIAYK 8 1 0 Unmodified _LPVDIAYK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.7755 2 459.768386 917.522219 92146.33 0.44582 0.00020497 -0.34566 -0.00015892 0.10016 4.6052E-05 459.768004535603 463.775296142728 58.443 0.28779 58.443 58.3 58.588 0 94 21 6 0 0 0 0.024726 1 33972 55.676 0 1 1.6124 1.7894 0 48710000 17819000 30891000 23078 1486 8694 8895 36209 36209 LPVDLAEELGHR 12 0 1 Unmodified _LPVDLAEELGHR_ 0 0 0 J3QRG6;K7PML8;P42771;K7ES20;L8E941;K7ENC6 J3QRG6 J3QRG6 CDKN2A Cyclin-dependent kinase inhibitor 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.5815 3 450.245498 1347.71466 91188.51 0.33735 0.00015189 -0.0933 -4.2008E-05 0.24405 0.00010988 450.245443167233 453.581348222623 85.141 0.70123 85.141 84.725 85.427 0 254 57 6 0 0 0 0.00012952 2 50978 71.241 49.61 1 1.662 1.7835 0 46515000 20328000 26187000 23079 1339 8695 8896 36210;36211 36210 LPVDLAEELGHR 12 0 1 Unmodified _LPVDLAEELGHR_ 0 0 0 J3QRG6;K7PML8;P42771;K7ES20;L8E941;K7ENC6 J3QRG6 J3QRG6 CDKN2A Cyclin-dependent kinase inhibitor 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.5811 3 450.245498 1347.71466 90977.16 0.50221 0.00022612 0.23878 0.00010751 0.74099 0.00033363 450.245482056694 453.581566125142 83.904 0.67405 83.904 83.568 84.242 0 252 56 7 0 0 0 0.00023793 2 51364 66.023 55.697 1 1.7504 2.0139 0 75100000 27088000 48012000 23080 1339 8695 8896 36212;36213 36212 LPVDLAEELGHR 12 0 1 Unmodified _LPVDLAEELGHR_ 0 0 0 J3QRG6;K7PML8;P42771;K7ES20;L8E941;K7ENC6 J3QRG6 J3QRG6 CDKN2A Cyclin-dependent kinase inhibitor 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 453.582 3 450.245498 1347.71466 90073.34 -0.093283 -4.2E-05 0.40178 0.0001809 0.30849 0.0001389 450.245616627541 453.581729261255 96.749 0.36269 96.749 96.522 96.885 0 66 17 6 0 0 0 0.057515 1 53523 18.73 18.73 1 1.3016 1.1234 0 2733600 1070600 1663000 23081 1339 8695 8896 36214 36214 LPVESVHILEDK 12 1 0 Unmodified _LPVESVHILEDK_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.2578 3 460.257403 1377.75038 88755.03 0.40557 0.00018667 0.29346 0.00013507 0.69902 0.00032173 460.257623527015 462.928893663813 75.341 0.52142 75.341 75.059 75.58 0 167 42 6 0 0 0 0.003779 2 44312 45.115 37.391 1 0.98854 0.98005 0 19205000 10240000 8965500 23082 641 8696 8897 36215;36216 36215 LPVESVHILEDK 12 1 0 Unmodified _LPVESVHILEDK_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.9293 3 460.257403 1377.75038 90443.48 0.23862 0.00010983 0.30982 0.0001426 0.54844 0.00025242 460.257517314102 462.928846337752 73.961 0.5278 73.961 73.645 74.173 0 157 42 7 0 0 0 0.010396 1 44426 35.3 28.419 1 0.90673 0.9051 0 14716000 7902600 6813600 23083 641 8696 8897 36217 36217 LPVICMDISHDGALIATGSADR 22 0 1 Oxidation (M) _LPVICM(ox)DISHDGALIATGSADR_ LPVICM(1)DISHDGALIATGSADR LPVICM(87.77)DISHDGALIATGSADR 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.0521 3 776.715598 2327.12497 NaN NaN NaN -1.7105 -0.0013286 NaN NaN NaN NaN 97.476 0.49503 97.476 97.267 97.762 7.6294E-06 0 0 0 8.0019E-13 1 59442 87.772 82.563 1 NaN NaN 0 38763000 0 38763000 23084 1827 8697 8898 36218 36218 1686 LPVICMDISHDGALIATGSADR 22 0 1 Oxidation (M) _LPVICM(ox)DISHDGALIATGSADR_ LPVICM(1)DISHDGALIATGSADR LPVICM(80.75)DISHDGALIATGSADR 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.7173 3 776.715598 2327.12497 NaN NaN NaN -0.16322 -0.00012678 NaN NaN NaN NaN 97.524 0.54348 97.524 97.267 97.811 0 0 0 0 1.8637E-12 2 59614 80.752 72.663 1 NaN NaN 0 13317000 13317000 0 23085 1827 8697 8898 36219;36220 36220 1686 LPVICMDISHDGALIATGSADR 22 0 1 Unmodified _LPVICMDISHDGALIATGSADR_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.0547 3 771.38396 2311.13005 69914.41 0.95435 0.00073617 -0.74757 -0.00057666 0.20678 0.00015951 771.717534472619 775.053874411435 121.43 0.29249 121.43 121.27 121.56 0 39 16 4 0 0 0 0.053255 1 71376 9.6482 5.8444 1 2.2845 2.0103 0 4133600 1884500 2249100 23086 1827 8697 8899 36221 36221 LPVLAGCLK 9 1 0 Unmodified _LPVLAGCLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.7913 2 485.791338 969.568123 88616.96 0.37162 0.00018053 0.042901 2.0841E-05 0.41452 0.00020137 485.791258934637 489.798322987371 80.454 0.61192 80.454 80.134 80.746 0 205 52 5 0 0 0 0.0061036 1 47773 65.038 39.301 1 0.60056 0.62796 0 30035000 19949000 10086000 23087 1665 8698 8900 36222 36222 LPVLAGCLK 9 1 0 Unmodified _LPVLAGCLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.7913 2 485.791338 969.568123 88306.66 0.41064 0.00019949 -0.17301 -8.4049E-05 0.23763 0.00011544 485.791244292804 489.797999224725 79.286 0.96915 79.286 78.688 79.657 0 246 81 5 0 0 0 0.030038 1 48102 46.021 20.284 1 0.59192 0.59802 0 26784000 16759000 10025000 23088 1665 8698 8900 36223 36223 LPVLAGCLK 9 1 0 Unmodified _LPVLAGCLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.7913 2 485.791338 969.568123 88183.92 0.29365 0.00014265 -0.031807 -1.5451E-05 0.26184 0.0001272 485.791237223763 489.798308936928 91.754 0.76178 91.754 91.456 92.218 0 176 51 5 0 0 0 0.029026 1 50931 46.426 15.814 1 0.33239 0.26354 0 4673600 3328700 1344800 23089 1665 8698 8900 36224 36224 LPVLAGCLK 9 1 0 Unmodified _LPVLAGCLK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.791 2 485.791338 969.568123 89184.15 0.2297 0.00011158 -0.014358 -6.9751E-06 0.21534 0.00010461 485.791232324991 489.798409649914 91.529 0.81362 91.529 91.229 92.042 0 194 54 5 0 0 0 0.034102 1 49938 44.395 13.783 1 0.31155 0.24517 0 3861800 2941500 920300 23090 1665 8698 8900 36225 36225 LPVPAAAPTPWETHK 15 1 0 Unmodified _LPVPAAAPTPWETHK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.9596 3 538.959469 1613.85658 82036.42 0.72819 0.00039247 -0.011048 -5.9546E-06 0.71714 0.00038651 538.959335268995 541.630728312788 81.776 0.98312 81.776 81.439 82.423 0 409 85 8 0 0 0 0.0010319 2 48839 42.317 42.317 1 0.60828 0.68771 0 84559000 52322000 32237000 23091 1698 8699 8901 36226;36227 36227 LPVPAAAPTPWETHK 15 1 0 Unmodified _LPVPAAAPTPWETHK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.9595 3 538.959469 1613.85658 81882.59 0.5368 0.00028931 0.29906 0.00016118 0.83586 0.0004505 538.959470282521 541.630932829111 80.645 0.95608 80.645 80.26 81.216 0 337 79 8 0 0 0 0.0016137 1 49205 36.944 36.944 1 0.63802 0.71331 0 105500000 69552000 35952000 23092 1698 8699 8901 36228 36228 LPVPAAAPTPWETHK 15 1 0 Unmodified _LPVPAAAPTPWETHK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.6303 3 538.959469 1613.85658 81364.57 0.34442 0.00018563 0.26506 0.00014285 0.60947 0.00032848 539.293988522646 541.630897976404 92.953 0.7941 92.953 92.628 93.422 0 261 51 8 0 0 0 0.019938 2 50886 22.606 22.606 1 1.117 0.89764 0 16574000 7382700 9191000 23093 1698 8699 8901 36229;36230 36229 LPVVLPQSTLNLAKPDFGAEAK 22 2 0 Unmodified _LPVVLPQSTLNLAKPDFGAEAK_ 0 0 1 B3KQQ9;O95084;E9PRR2 B3KQQ9 B3KQQ9 PRSS23 Serine protease 23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.1021 3 770.101887 2307.28383 75837.85 0.86077 0.00066288 -0.23914 -0.00018416 0.62163 0.00047872 770.436092081927 775.44440480663 113.84 0.31029 113.84 113.67 113.98 -7.6294E-06 61 21 6 0 0 0 0.0088127 1 72178 22.996 22.996 1 0.54665 0.6055 0 4721100 2600600 2120500 23094 929 8700 8902 36231 36231 LPVVLPQSTLNLAKPDFGAEAK 22 2 0 Unmodified _LPVVLPQSTLNLAKPDFGAEAK_ 0 0 1 B3KQQ9;O95084;E9PRR2 B3KQQ9 B3KQQ9 PRSS23 Serine protease 23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.4459 3 770.101887 2307.28383 69545.5 0.85062 0.00065506 -0.010024 -7.7194E-06 0.84059 0.00064734 770.435760052523 775.779121255073 124.85 0.33636 124.85 124.68 125.02 -7.6294E-06 70 14 8 0 0 0 0.033102 2 74861 17.998 17.998 1 1.0513 0.90596 0 5695500 2643500 3052000 23095 929 8700 8902 36232;36233 36233 LPVVLPQSTLNLAKPDFGAEAK 22 2 0 Unmodified _LPVVLPQSTLNLAKPDFGAEAK_ 0 0 1 B3KQQ9;O95084;E9PRR2 B3KQQ9 B3KQQ9 PRSS23 Serine protease 23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.4442 3 770.101887 2307.28383 69455.45 0.89914 0.00069243 -0.3173 -0.00024435 0.58185 0.00044808 770.4359210572 775.444610862978 124.71 0.32135 124.71 124.53 124.85 0 77 15 8 0 0 0 2.603E-05 2 73852 40.381 40.381 1 1.0235 0.8782 0 3923400 2013600 1909800 23096 929 8700 8902 36234;36235 36234 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 0 2 Oxidation (M) _LQAALDDEEAGGRPAM(ox)EPGNGSLDLGGDSAGR_ LQAALDDEEAGGRPAM(1)EPGNGSLDLGGDSAGR LQAALDDEEAGGRPAM(62.71)EPGNGSLDLGGDSAGR 0 1 1 B4DLR3;Q00839;Q9UEL2 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.1561 3 1048.14958 3141.4269 60066.73 0.46504 0.00048743 -0.31512 -0.00033029 0.14992 0.00015713 1048.81780731816 1055.15567713369 75.471 0.44995 75.471 75.27 75.72 0 209 38 9 0 0 0 7.8316E-19 1 44336 62.706 62.706 1 0.95726 1.0366 0 23672000 12576000 11096000 23097 999 8701 8903 36236 36236 789 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 0 2 Oxidation (M) _LQAALDDEEAGGRPAM(ox)EPGNGSLDLGGDSAGR_ LQAALDDEEAGGRPAM(1)EPGNGSLDLGGDSAGR LQAALDDEEAGGRPAM(64.53)EPGNGSLDLGGDSAGR 0 1 1 B4DLR3;Q00839;Q9UEL2 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1055.1571 3 1048.14958 3141.4269 59902.71 0.63521 0.00066579 -0.45021 -0.00047189 0.18499 0.0001939 1048.14961145092 1055.48899870427 74.568 0.44965 74.568 74.337 74.787 0 185 39 8 0 0 0 6.6494E-19 1 44877 64.532 64.532 1 1.1608 1.3159 0 32883000 15045000 17838000 23098 999 8701 8903 36237 36237 789 LQAEAQQLR 9 0 1 Unmodified _LQAEAQQLR_ 0 0 0 K7EQA9;Q6FG59;A0A024R7B7;Q16543;K7EKQ2 K7EQA9 K7EQA9 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.7983 2 528.793455 1055.57236 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.513 1 28.513 28.013 29.013 0 0 0 0 0.0036347 1 13481 69.825 30.803 1 23099 218 8702 8904 36238 36238 LQAEAQQLR 9 0 1 Unmodified _LQAEAQQLR_ 0 0 0 K7EQA9;Q6FG59;A0A024R7B7;Q16543;K7EKQ2 K7EQA9 K7EQA9 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.7968 2 528.793455 1055.57236 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.869 1 27.869 27.369 28.369 1.9073E-06 0 0 0 0.0011339 1 13118 95.909 51.217 1 23100 218 8702 8904 36239 36239 LQAEEVAQQK 10 1 0 Unmodified _LQAEEVAQQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.3104 2 572.303852 1142.59315 80385.38 0.44193 0.00025292 -1.1223 -0.0006423 -0.68037 -0.00038938 572.303826173451 576.310475838806 24.507 0.44801 24.507 24.308 24.756 0 87 21 7 0 0 0 1.6847E-08 2 10231 122.52 58.7 1 2.0526 2.0724 0 28438000 10307000 18131000 23101 1754 8703 8905 36240;36241 36240 LQAEIDNIK 9 1 0 Unmodified _LQAEIDNIK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.2977 2 522.290214 1042.56587 82370.61 0.56881 0.00029708 0.17506 9.1434E-05 0.74387 0.00038852 522.290280922415 526.297307778696 51.6 1.0065 51.6 51.121 52.127 0 402 88 9 0 0 0 3.0707E-08 1 28569 147.19 73.937 1 1.0524 1.2253 0 260140000 127680000 132470000 + 23102 1171;1158 8704 8906 36242 36242 LQAEIDNIK 9 1 0 Unmodified _LQAEIDNIK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.2903 2 522.290214 1042.56587 82927.6 0.43529 0.00022735 0.38054 0.00019875 0.81583 0.0004261 522.290292788408 526.297299425272 50.402 0.82327 50.402 50.015 50.839 0 357 73 8 0 0 0 0.00090954 2 28600 92.653 50.055 1 1.0355 1.2063 0 248810000 118250000 130560000 + 23103 1171;1158 8704 8906 36243;36244 36244 LQAEIDNIK 9 1 0 Unmodified _LQAEIDNIK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.291 2 522.290214 1042.56587 83388.59 0.12749 6.6584E-05 0.39771 0.00020772 0.52519 0.0002743 522.290335505001 526.297341082886 59.559 1.0961 59.559 59.054 60.15 -3.8147E-06 320 79 6 0 0 0 0.046218 1 30223 39.547 16.766 1 0.97694 0.77322 0 10455000 5156600 5298400 + 23104 1171;1158 8704 8906 36245 36245 LQAELEGIK 9 1 0 Unmodified _LQAELEGIK_ 0 0 0 L0R512 L0R512 L0R512 NCAM2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.7941 2 500.787307 999.560061 83899.54 0.72187 0.0003615 -0.18255 -9.1417E-05 0.53932 0.00027008 500.787268273561 504.794210686926 60.345 1.1943 60.345 60.04 61.235 0 443 97 10 0 0 0 0.001341 3 34295 86.67 0 1 1.0741 1.2817 0 734970000 352670000 382300000 23105 1349 8705 8907 36246;36247;36248 36247 LQAELEGIK 9 1 0 Unmodified _LQAELEGIK_ 0 0 0 L0R512 L0R512 L0R512 NCAM2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.7885 2 500.787307 999.560061 NaN NaN NaN 0.46233 0.00023153 NaN NaN NaN NaN 61.285 0.48857 61.285 60.964 61.452 0 0 0 0 0.03378 2 35062 52.255 0 1 NaN NaN 0 2688700 2688700 0 23106 1349 8705 8907 36249;36250 36250 LQAELEGIK 9 1 0 Unmodified _LQAELEGIK_ 0 0 0 L0R512 L0R512 L0R512 NCAM2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.7946 2 500.787307 999.560061 NaN NaN NaN -0.2784 -0.00013942 NaN NaN NaN NaN 59.143 1.1776 59.143 58.68 59.857 0 0 0 0 2.5793E-05 1 34296 109.11 0 1 NaN NaN 0 440170000 0 440170000 23107 1349 8705 8907 36251 36251 LQAELEGIK 9 1 0 Unmodified _LQAELEGIK_ 0 0 0 L0R512 L0R512 L0R512 NCAM2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.7876 2 500.787307 999.560061 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.983 1 58.983 58.483 59.483 -3.8147E-06 0 0 0 6.049E-06 1 34309 114.39 0 1 23108 1349 8705 8907 36252 36252 LQAELEGIK 9 1 0 Unmodified _LQAELEGIK_ 0 0 0 L0R512 L0R512 L0R512 NCAM2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.7881 2 500.787307 999.560061 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.829 1 59.829 59.329 60.329 3.8147E-06 0 0 0 0.045696 1 34847 47.96 0 1 23109 1349 8705 8907 36253 36253 LQAELEGIK 9 1 0 Unmodified _LQAELEGIK_ 0 0 0 L0R512 L0R512 L0R512 NCAM2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.7956 2 500.787307 999.560061 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.436 1 60.436 59.936 60.936 3.8147E-06 0 0 0 0.023113 1 35343 55.235 0 1 23110 1349 8705 8907 36254 36254 LQAELEGIK 9 1 0 Unmodified _LQAELEGIK_ 0 0 0 L0R512 L0R512 L0R512 NCAM2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 504.7941 2 500.787307 999.560061 82418.68 0.075309 3.7714E-05 0.33991 0.00017022 0.41522 0.00020794 500.787472888854 504.794481667761 70 0.8278 70 69.765 70.593 -7.6294E-06 317 65 8 0 0 0 0.0016101 4 36637 83.168 0 1 1.874 1.5814 0 56541000 18608000 37933000 23111 1349 8705 8907 36255;36256;36257;36258 36256 LQAELEGIK 9 1 0 Unmodified _LQAELEGIK_ 0 0 0 L0R512 L0R512 L0R512 NCAM2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.7947 2 500.787307 999.560061 85315.31 -0.046964 -2.3519E-05 0.44201 0.00022135 0.39504 0.00019783 500.78758024884 504.794539851172 70.472 0.61176 70.472 70.208 70.82 0 281 52 8 0 0 0 0.0018617 2 36137 79.893 0 1 1.913 1.6092 0 51398000 16727000 34672000 23112 1349 8705 8907 36259;36260 36259 LQAETEELEEEK 12 1 0 Unmodified _LQAETEELEEEK_ 0 0 0 C9JCN8;P15408 C9JCN8 C9JCN8 FOSL2 Fos-related antigen 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.3513 2 724.343568 1446.67258 71618.36 0.50929 0.0003689 0.34358 0.00024887 0.85287 0.00061777 724.34351311468 728.350846167747 50.92 0.57053 50.92 50.674 51.245 0 192 36 8 0 0 0 0.00021683 2 24996 82.171 82.171 1 1.0996 0.88035 0 7249100 3327700 3921500 23113 1132 8706 8908 36261;36262 36262 LQAETEELEEEK 12 1 0 Unmodified _LQAETEELEEEK_ 0 0 0 C9JCN8;P15408 C9JCN8 C9JCN8 FOSL2 Fos-related antigen 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.3513 2 724.343568 1446.67258 71452.59 0.41398 0.00029986 0.43182 0.00031278 0.84579 0.00061264 724.34372222326 728.350873260817 51.401 0.66079 51.401 51.182 51.843 3.8147E-06 219 45 8 0 0 0 0.0013581 2 24663 61.344 61.344 1 1.0335 0.84829 0 5257100 2606600 2650500 23114 1132 8706 8908 36263;36264 36263 LQAFGLNPK 9 1 0 Unmodified _LQAFGLNPK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.2923 2 494.284734 986.554916 86723.38 0.26507 0.00013102 0.20602 0.00010183 0.4711 0.00023286 494.284807711427 498.291943779846 66.59 0.89528 66.59 66.171 67.066 0 222 74 4 0 0 0 0.0018358 1 39246 80.229 56.706 1 0.78058 0.82934 0 23369000 13648000 9721100 23115 1916 8707 8909 36265 36265 LQAITASSANLR 12 0 1 Unmodified _LQAITASSANLR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.856 2 622.851501 1243.68845 79265.52 0.69604 0.00043353 -0.12003 -7.4761E-05 0.57601 0.00035877 622.851381610907 627.855440584829 56.963 0.57701 56.963 56.746 57.323 3.8147E-06 189 46 6 0 0 0 0.0010242 2 32046 62.303 47.365 1 0.58738 0.61377 0 13219000 8198200 5020300 23116 1323 8708 8910 36266;36267 36266 LQAITASSANLR 12 0 1 Unmodified _LQAITASSANLR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.8564 2 622.851501 1243.68845 NaN NaN NaN -0.24946 -0.00015538 NaN NaN NaN NaN 56.044 0.59895 56.044 55.841 56.44 0 0 0 0 0.00075596 1 32169 85.533 57.325 1 NaN NaN 0 7132300 0 7132300 23117 1323 8708 8910 36268 36268 LQAITASSANLR 12 0 1 Unmodified _LQAITASSANLR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.852 2 622.851501 1243.68845 74403.92 0.62682 0.00039041 -1.2616 -0.00078578 -0.63477 -0.00039537 622.850372002333 627.855571044124 66.629 0.67702 66.629 66.241 66.918 0 162 37 6 0 0 0 0.0010242 2 34609 62.303 51.473 1 0.51183 0.43147 0 4697500 3084400 1613100 23118 1323 8708 8910 36269;36270 36269 LQAITASSANLR 12 0 1 Unmodified _LQAITASSANLR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.8518 2 622.851501 1243.68845 NaN NaN NaN -2.2099 -0.0013764 NaN NaN NaN NaN 67.126 0.78753 67.126 66.671 67.459 0 0 0 0 0.025117 1 34143 49.35 14.126 1 NaN NaN 0 2620200 2620200 0 23119 1323 8708 8910 36271 36271 LQAITASSANLR 12 0 1 Unmodified _LQAITASSANLR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.8565 2 622.851501 1243.68845 NaN NaN NaN 0.55256 0.00034416 NaN NaN NaN NaN 67.16 0.54742 67.16 66.794 67.341 0 0 0 0 0.020376 1 34148 51.092 23.35 1 NaN NaN 0 1289100 0 1289100 23120 1323 8708 8910 36272 36272 LQALANEQAAAAHELEK 17 1 0 Unmodified _LQALANEQAAAAHELEK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.9838 3 602.983002 1805.92718 77127.63 0.50154 0.00030242 0.23655 0.00014264 0.73809 0.00044505 602.982967471426 605.654311859164 72.67 0.5709 72.67 72.462 73.033 0 181 40 7 0 0 0 3.3017E-05 2 38309 59.281 59.281 1 0.46191 0.36487 0 5241300 3204000 2037300 23121 197 8709 8911 36273;36274 36273 LQALANEQAAAAHELEK 17 1 0 Unmodified _LQALANEQAAAAHELEK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.9892 3 602.983002 1805.92718 77606.11 0.51248 0.00030901 0.13959 8.4172E-05 0.65207 0.00039319 603.317478542869 605.654248233386 73.174 0.49943 73.174 72.952 73.451 0 193 36 8 0 0 0 0.0004426 2 37845 40.844 40.844 1 0.4268 0.34276 0 4220900 2613800 1607000 23122 197 8709 8911 36275;36276 36276 LQALDTGWNELHK 13 1 0 Unmodified _LQALDTGWNELHK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.267 3 508.93169 1523.77324 87101.05 0.25226 0.00012838 -0.40403 -0.00020562 -0.15177 -7.7242E-05 508.931126391323 511.602632716358 73.779 0.49485 73.779 73.538 74.032 0 120 39 5 0 0 0 0.017663 1 44359 27.649 27.649 1 1.1903 1.1974 0 13547000 4964800 8581700 23123 415 8710 8912 36277 36277 LQAMHLER 8 0 1 Oxidation (M) _LQAM(ox)HLER_ LQAM(1)HLER LQAM(51.07)HLER 0 1 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.268 2 507.263476 1012.5124 NaN NaN NaN -0.052834 -2.6801E-05 NaN NaN NaN NaN 18.672 0.31435 18.672 18.597 18.911 0 0 0 0 0.014679 1 5337 51.066 17.27 1 NaN NaN 0 3405200 0 3405200 23124 1694 8711 8913 36278 36278 1525 LQANISTGVSK 11 1 0 Unmodified _LQANISTGVSK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.3148 2 559.31422 1116.61389 80805.72 0.50728 0.00028373 0.024287 1.3584E-05 0.53157 0.00029731 559.314181109107 563.321236006982 40.153 0.4122 40.153 39.922 40.335 0 161 33 7 0 0 0 2.3069E-12 2 20886 140.45 94.766 1 1.2954 1.4609 0 77120000 33539000 43582000 23125 1412 8712 8914 36279;36280 36280 LQANISTGVSK 11 1 0 Unmodified _LQANISTGVSK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.314 2 559.31422 1116.61389 82068.76 0.54479 0.00030471 -0.18072 -0.00010108 0.36407 0.00020363 559.314100855179 563.321113389108 39.107 0.37189 39.107 38.928 39.3 0 156 30 8 0 0 0 3.2449E-10 2 20608 132.88 63.677 1 1.3055 1.459 0 95423000 40853000 54569000 23126 1412 8712 8914 36281;36282 36282 LQANISTGVSK 11 1 0 Unmodified _LQANISTGVSK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.3219 2 559.31422 1116.61389 80442.65 0.42465 0.00023751 0.26208 0.00014659 0.68673 0.0003841 559.314369676132 563.321381470361 45.973 0.59782 45.973 45.696 46.294 3.8147E-06 197 47 6 0 0 0 0.01237 1 21994 47.894 17.727 1 1.6898 1.3377 0 6256500 2408500 3848000 23127 1412 8712 8914 36283 36283 LQANISTGVSK 11 1 0 Unmodified _LQANISTGVSK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.3144 2 559.31422 1116.61389 80913.05 0.48153 0.00026932 -0.21009 -0.00011751 0.27143 0.00015182 559.314117758331 563.321111911086 46.061 0.58336 46.061 45.816 46.4 3.8147E-06 193 39 7 0 0 0 0.0016997 2 21586 65.5 27.607 1 1.6298 1.3316 0 5600400 2132700 3467700 23128 1412 8712 8914 36284;36285 36285 LQAQLNELQAQLSQK 15 1 0 Unmodified _LQAQLNELQAQLSQK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 860.4775 2 856.4705 1710.92645 67396.72 0.72223 0.00061857 -0.2886 -0.00024718 0.43363 0.00037139 856.470070304927 860.979152444198 89.99 0.43813 89.99 89.774 90.212 0 131 34 6 0 0 0 5.8807E-23 2 54257 149.83 135.41 1 0.92965 1.0021 0 33990000 12933000 21057000 23129 186;1747 8713 8915 36286;36287 36286 LQAQLNELQAQLSQK 15 1 0 Unmodified _LQAQLNELQAQLSQK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.4697 2 856.4705 1710.92645 67824.09 0.78681 0.00067388 -0.58565 -0.00050159 0.20115 0.00017228 856.971890202639 860.476987006147 89.062 0.50931 89.062 88.798 89.308 0 187 42 6 0 0 0 3.9078E-15 2 54848 128.85 119.19 1 0.92169 0.94416 0 31836000 15351000 16485000 23130 186;1747 8713 8915 36288;36289 36288 LQAQLNELQAQLSQK 15 1 0 Unmodified _LQAQLNELQAQLSQK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.9794 2 856.4705 1710.92645 65524.99 0.60805 0.00052078 0.053457 4.5784E-05 0.66151 0.00056656 856.470229873693 860.478198822868 103.68 0.6524 103.68 103.39 104.04 0 249 41 8 0 0 0 2.1583E-10 2 58909 119.69 100.94 1 1.4199 1.152 0 26282000 9921800 16361000 23131 186;1747 8713 8915 36290;36291 36291 LQAQLNELQAQLSQK 15 1 0 Unmodified _LQAQLNELQAQLSQK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 860.4781 2 856.4705 1710.92645 65901.79 0.36764 0.00031488 0.44958 0.00038506 0.81723 0.00069993 856.470567642811 860.478287897113 103.62 0.67164 103.62 103.3 103.97 0 258 44 8 0 0 0 8.4492E-71 2 58005 208.08 208.08 1 1.5346 1.2456 0 24728000 9604700 15123000 23132 186;1747 8713 8915 36292;36293 36293 LQAQSLSTVGPR 12 0 1 Unmodified _LQAQSLSTVGPR_ 0 0 0 O43290;B4DDH9 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8556 2 628.851501 1255.68845 79936.71 0.7217 0.00045384 -0.79019 -0.00049691 -0.068487 -4.3068E-05 629.352931309257 633.855741215187 50.067 0.433 50.067 49.827 50.26 0 112 37 5 0 0 0 0.0017153 1 28295 60.434 20.887 1 0.77637 0.76851 0 12324000 8418000 3905600 23133 1384 8714 8916 36294 36294 LQAVEVVITHLAPGTK 16 1 0 Unmodified _LQAVEVVITHLAPGTK_ 0 0 0 Q9Y2V2 Q9Y2V2 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.0008 3 559.329562 1674.96686 81418.48 0.5745 0.00032133 0.085863 4.8026E-05 0.66036 0.00036936 559.32973615635 562.335158073411 104.13 0.80904 104.13 103.78 104.59 7.6294E-06 244 67 5 0 0 0 0.00075437 2 64180 40.844 40.844 1 1.4417 1.454 0 27280000 11436000 15844000 23134 2127 8715 8917 36295;36296 36295 LQAVEVVITHLAPGTK 16 1 0 Unmodified _LQAVEVVITHLAPGTK_ 0 0 0 Q9Y2V2 Q9Y2V2 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.0007 3 559.329562 1674.96686 81070.53 0.72742 0.00040687 0.05242 2.932E-05 0.77984 0.00043619 559.330008486385 562.3351093645 103.1 0.83042 103.1 102.68 103.51 -7.6294E-06 317 65 7 0 0 0 4.7059E-05 2 64997 66.826 66.826 1 1.4591 1.5683 0 37522000 16322000 21200000 23135 2127 8715 8917 36297;36298 36297 LQAVEVVITHLAPGTK 16 1 0 Unmodified _LQAVEVVITHLAPGTK_ 0 0 0 Q9Y2V2 Q9Y2V2 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.0015 3 559.329562 1674.96686 81959.94 0.95681 0.00053517 -0.17476 -9.7747E-05 0.78205 0.00043742 559.330021024528 562.000761151625 115.46 0.53593 115.46 115.21 115.75 0 126 25 7 0 0 0 0.010717 1 67649 23.901 23.901 1 1.2552 0.99511 0 4278100 1781900 2496300 23136 2127 8715 8917 36299 36299 LQAVEVVITHLAPGTK 16 1 0 Unmodified _LQAVEVVITHLAPGTK_ 0 0 0 Q9Y2V2 Q9Y2V2 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.0013 3 559.329562 1674.96686 81069.07 0.71385 0.00039928 0.11854 6.6301E-05 0.83238 0.00046558 559.330149562995 562.000978348161 115.19 0.53072 115.19 114.96 115.5 7.6294E-06 104 25 6 0 0 0 0.001937 1 66540 35.473 35.473 1 1.3655 1.1143 0 6313800 2633200 3680600 23137 2127 8715 8917 36300 36300 LQAVTDDHIR 10 0 1 Unmodified _LQAVTDDHIR_ 0 0 0 V9HWI1;P30043 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.2115 3 389.875405 1166.60439 NaN NaN NaN -0.38053 -0.00014836 NaN NaN NaN NaN 29.034 0.21676 29.034 28.924 29.141 1.9073E-06 0 0 0 7.044E-05 1 13934 92.538 48.769 1 NaN NaN 0 75553000 0 75553000 23138 1528 8716 8918 36301 36301 LQDAEIAR 8 0 1 Unmodified _LQDAEIAR_ 0 0 0 R4GN98;P06703 R4GN98 R4GN98 S100A6 Protein S100;Protein S100-A6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.2528 2 458.248349 914.482145 93213.49 0.2304 0.00010558 0.064332 2.948E-05 0.29473 0.00013506 458.24817641959 463.252453478291 27.425 0.33417 27.425 27.276 27.61 0 66 19 5 0 0 0 0.0038362 1 12641 95.531 33.568 1 2.1715 2.2691 0 10665000 3461600 7202900 23139 1449 8717 8919 36302 36302 LQDAEIAR 8 0 1 Unmodified _LQDAEIAR_ 0 0 0 R4GN98;P06703 R4GN98 R4GN98 S100A6 Protein S100;Protein S100-A6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2527 2 458.248349 914.482145 89754.56 0.42088 0.00019287 0.062893 2.8821E-05 0.48377 0.00022169 458.248313281203 463.252487074801 26.99 0.39713 26.99 26.842 27.239 1.9073E-06 55 18 6 0 0 0 0.024726 1 12423 55.676 21.423 1 1.9666 1.9761 0 19194000 5693300 13501000 23140 1449 8717 8919 36303 36303 LQDAINILK 9 1 0 Unmodified _LQDAINILK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.3115 2 514.310949 1026.60735 85152.79 0.72138 0.00037101 0.14701 7.561E-05 0.86839 0.00044662 514.311257841369 518.318029496599 82.844 0.59807 82.844 82.481 83.079 0 193 48 6 0 0 0 1.4999E-05 2 49517 122.52 58.951 1 2.5183 2.7895 0 58380000 16781000 41599000 23141 1207 8718 8920 36304;36305 36305 LQDAINILK 9 1 0 Unmodified _LQDAINILK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.3185 2 514.310949 1026.60735 85149.3 0.72153 0.00037109 -0.091132 -4.687E-05 0.6304 0.00032422 514.311203476035 518.317878588818 81.693 0.67184 81.693 81.36 82.032 0 228 57 6 0 0 0 0.00034217 1 49780 101.43 52.334 1 2.4452 2.7584 0 63227000 20503000 42724000 23142 1207 8718 8920 36306 36306 LQDAINILK 9 1 0 Unmodified _LQDAINILK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.3107 2 514.310949 1026.60735 86568.3 0.53394 0.00027461 -0.12369 -6.3618E-05 0.41024 0.00021099 514.310784764324 518.317847878248 94.658 0.51749 94.658 94.372 94.89 0 101 33 5 0 0 0 0.044918 1 52909 40.067 14.33 1 1.1743 0.94217 0 2859200 1292100 1567100 23143 1207 8718 8920 36307 36307 LQDASAEVER 10 0 1 Unmodified _LQDASAEVER_ 0 0 0 A0A024R7H5;B4E0Z6;Q10589 A0A024R7H5 A0A024R7H5 BST2 Bone marrow stromal antigen 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.2818 2 559.277835 1116.54112 79933.02 0.37781 0.0002113 -0.26204 -0.00014655 0.11577 6.4748E-05 559.277061589549 564.282011663713 24.611 0.51234 24.611 24.337 24.849 0 74 18 7 0 0 0 1.0035E-11 2 10308 138.66 70.238 1 1.8141 1.8557 0 35530000 13088000 22441000 23144 225 8719 8921 36308;36309 36308 LQDASAEVER 10 0 1 Unmodified _LQDASAEVER_ 0 0 0 A0A024R7H5;B4E0Z6;Q10589 A0A024R7H5 A0A024R7H5 BST2 Bone marrow stromal antigen 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.2821 2 559.277835 1116.54112 79521.54 0.43964 0.00024588 -0.65726 -0.00036759 -0.21762 -0.00012171 559.276901086316 564.281804343776 24.395 0.47958 24.395 24.072 24.552 0 86 20 6 0 0 0 4.2954E-16 3 10078 153.05 84.624 1 1.8592 2.1064 0 48049000 17494000 30554000 23145 225 8719 8921 36310;36311;36312 36310 LQDASAEVER 10 0 1 Unmodified _LQDASAEVER_ 0 0 0 A0A024R7H5;B4E0Z6;Q10589 A0A024R7H5 A0A024R7H5 BST2 Bone marrow stromal antigen 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.282 2 559.277835 1116.54112 NaN NaN NaN -0.18362 -0.0001027 NaN NaN NaN NaN 27.541 0.33066 27.541 27.342 27.673 0 0 0 0 0.0051079 1 10755 70.028 32.47 1 NaN NaN 0 1223300 0 1223300 23146 225 8719 8921 36313 36313 LQDEEASMGASYSK 14 1 0 Oxidation (M) _LQDEEASM(ox)GASYSK_ LQDEEASM(1)GASYSK LQDEEASM(75.7)GASYSK 0 1 0 A0A024R2G2;Q9BXW9 A0A024R2G2 A0A024R2G2 FANCD2 Fanconi anemia group D2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.3405 2 766.332678 1530.6508 71259.36 0.76034 0.00058267 -0.23644 -0.00018119 0.5239 0.00040148 766.332250928514 770.339757336017 22.718 0.2329 22.718 22.588 22.821 0 37 14 4 0 0 0 7.574E-05 2 8704 75.695 72.05 1 1.4301 1.5706 0 3096700 1157200 1939500 23147 111 8720 8922 36314;36315 36314 95 LQDEEASMGASYSK 14 1 0 Oxidation (M) _LQDEEASM(ox)GASYSK_ LQDEEASM(1)GASYSK LQDEEASM(75.7)GASYSK 0 1 0 A0A024R2G2;Q9BXW9 A0A024R2G2 A0A024R2G2 FANCD2 Fanconi anemia group D2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.3412 2 766.332678 1530.6508 72211.54 0.64073 0.00049101 -0.051701 -3.962E-05 0.58903 0.00045139 766.833859001188 770.339784944485 22.496 0.26048 22.496 22.388 22.649 0 33 10 5 0 0 0 7.574E-05 2 8471 75.695 72.05 1 0.76555 0.81444 0 4044000 2406300 1637700 23148 111 8720 8922 36316;36317 36316 95 LQDEFENR 8 0 1 Unmodified _LQDEFENR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7498 2 525.74617 1049.47779 NaN NaN NaN -1.3875 -0.00072947 NaN NaN NaN NaN 30.25 0.54148 30.25 30.124 30.665 0 0 0 0 0.0028608 1 14761 106.04 55.076 1 NaN NaN 0 7297900 0 7297900 23149 1054 8721 8923 36318 36318 LQDEFENR 8 0 1 Unmodified _LQDEFENR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7506 2 525.74617 1049.47779 86643.65 1.1107 0.00058395 0.064789 3.4063E-05 1.1755 0.00061801 525.746008864379 530.750096960795 29.757 0.5142 29.757 29.63 30.144 -1.9073E-06 104 39 6 0 0 0 0.00097363 1 14424 121.62 87.88 1 1.9922 2.0074 0 19501000 6700400 12800000 23150 1054 8721 8923 36319 36319 LQDEIQNMK 9 1 0 Unmodified _LQDEIQNMK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.7885 2 559.779156 1117.54376 NaN NaN NaN -0.04965 -2.7793E-05 NaN NaN NaN NaN 38.468 0.25898 38.468 38.364 38.623 0 0 0 0 0.0034986 1 20265 78.334 42.454 1 NaN NaN 0 6571700 0 6571700 23151 1457 8722 8924 36320 36320 LQDEIQNMK 9 1 0 Unmodified _LQDEIQNMK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.7863 2 559.779156 1117.54376 80172.81 0.51772 0.00028981 0.14215 7.9574E-05 0.65987 0.00036938 559.779116477228 563.786248198902 45.372 0.59206 45.372 45.126 45.719 0 145 42 5 0 0 0 0.00033401 2 21641 101.72 101.72 1 3.6192 2.882 0 6728700 1652900 5075800 23152 1457 8722 8924 36321;36322 36321 LQDEIQNMK 9 1 0 Unmodified _LQDEIQNMK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.7869 2 559.779156 1117.54376 81549.41 0.72128 0.00040376 -0.47639 -0.00026667 0.24489 0.00013709 559.778784690417 563.785969177148 45.523 0.64088 45.523 45.252 45.893 0 163 40 7 0 0 0 0.0017345 2 21166 81.548 81.548 1 3.4541 2.8184 0 6166400 1484300 4682100 23153 1457 8722 8924 36323;36324 36323 LQDEIQNMK 9 1 0 Oxidation (M) _LQDEIQNM(ox)K_ LQDEIQNM(1)K LQDEIQNM(142.08)K 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5 V9HWE1 V9HWE1 HEL113;VIM Vimentin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.7761 2 567.776613 1133.53867 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.502 1 22.502 22.002 23.002 0 0 0 0 3.6389E-12 1 8497 142.08 105.51 1 23154 1457 8722 8925 36325 36325 1173 LQDGVHIIK 9 1 0 Unmodified _LQDGVHIIK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.8032 2 511.803291 1021.59203 86539.79 0.46464 0.0002378 0.35001 0.00017914 0.81465 0.00041694 511.803389104294 515.810292120972 39.552 0.35773 39.552 39.337 39.695 0 133 30 6 0 0 0 1.9871E-05 1 20499 118.33 24.906 1 0.97343 1.0482 0 33470000 17233000 16237000 23155 2132 8723 8926 36326 36326 LQDGVHIIK 9 1 0 Unmodified _LQDGVHIIK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.8033 2 511.803291 1021.59203 85415.76 0.44178 0.00022611 -0.20012 -0.00010242 0.24166 0.00012368 511.803146338909 515.810145296267 44.739 0.41325 44.739 44.499 44.912 3.8147E-06 129 32 6 0 0 0 0.019545 1 21269 51.066 3.9845 1 0.91441 0.71128 0 3383400 1799300 1584100 23156 2132 8723 8926 36327 36327 LQDGVHIIK 9 1 0 Unmodified _LQDGVHIIK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.803 2 511.803291 1021.59203 86521.06 0.53832 0.00027551 -0.66969 -0.00034275 -0.13137 -6.7235E-05 511.802833659919 515.809990274388 44.495 0.4734 44.495 44.292 44.765 0 120 31 6 0 0 0 0.039611 1 20603 42.19 18.668 1 0.87629 0.70695 0 2539700 1221100 1318500 23157 2132 8723 8926 36328 36328 LQDLAGGIFPEDEIPEK 17 1 0 Unmodified _LQDLAGGIFPEDEIPEK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 935.9742 2 935.975281 1869.93601 62446.37 0.59417 0.00055613 0.40719 0.00038112 1.0014 0.00093725 935.975638604851 940.484331980587 110 0.71654 110 109.7 110.41 -7.6294E-06 296 49 9 0 0 0 3.5029E-05 3 68810 80.706 80.706 1 0.81562 0.91813 0 121030000 62788000 58246000 23158 1618 8724 8927 36329;36330;36331 36330 LQDLAGGIFPEDEIPEK 17 1 0 Unmodified _LQDLAGGIFPEDEIPEK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 939.9844 2 935.975281 1869.93601 62844.53 0.61254 0.00057332 0.3362 0.00031468 0.94874 0.000888 935.975670865372 939.982201843557 109.43 0.67796 109.43 109.17 109.85 0 312 45 10 0 0 0 0.00015053 2 70088 68.809 68.809 1 0.85889 0.95997 0 98551000 52908000 45643000 23159 1618 8724 8927 36332;36333 36332 LQDLAGGIFPEDEIPEK 17 1 0 Unmodified _LQDLAGGIFPEDEIPEK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 935.977 2 935.975281 1869.93601 62755.75 0.82542 0.00077258 0.39151 0.00036644 1.2169 0.001139 935.975677980354 939.98270228509 121.12 0.66348 121.12 120.78 121.45 -7.6294E-06 184 26 10 0 0 0 3.004E-05 2 71940 92.265 92.265 1 1.1141 0.91756 0 40466000 18918000 21548000 23160 1618 8724 8927 36334;36335 36334 LQDLAGGIFPEDEIPEK 17 1 0 Unmodified _LQDLAGGIFPEDEIPEK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 935.9764 2 935.975281 1869.93601 62786.66 0.72227 0.00067603 0.17064 0.00015971 0.89291 0.00083574 936.476941652584 939.982431954133 120.91 0.73668 120.91 120.61 121.34 -7.6294E-06 203 33 10 0 0 0 1.1075E-05 3 70903 101.2 101.2 1 1.0998 0.91232 0 35709000 16645000 19064000 23161 1618 8724 8927 36336;36337;36338 36337 LQDLELK 7 1 0 Unmodified _LQDLELK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H0Y394;C9J5E5;C9JIZ1;H7C0A4;Q5HYC5 A0A024R4E5 A0A024R4E5 HDLBP;DKFZp686L08115 Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.7575 2 429.750193 857.485833 95209.92 -0.16175 -6.951E-05 0.87964 0.00037803 0.7179 0.00030852 429.750694920309 433.757512110927 51.062 0.50698 51.062 50.877 51.383 0 101 40 4 0 0 0 0.030163 1 28906 69.176 0 1 2.2952 2.3256 0 29338000 9931100 19407000 23162 154 8725 8928 36339 36339 LQDLSSSFLK 10 1 0 Unmodified _LQDLSSSFLK_ 0 0 0 Q5HYL4;Q86U38 Q5HYL4 Q5HYL4 DKFZp686E1893;NOP9 Nucleolar protein 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.3117 2 569.311146 1136.60774 85291.88 0.96383 0.00054872 -0.6386 -0.00036356 0.32523 0.00018516 569.310614477223 573.318126659401 84.617 0.44112 84.617 84.46 84.902 0 84 36 5 0 0 0 0.0013651 1 50712 73.985 39.896 1 0.58886 0.59608 0 10166000 6305800 3859900 23163 1807 8726 8929 36340 36340 LQDPKDDECPVVNAYATLIENDSNPEVR 28 1 1 Unmodified _LQDPKDDECPVVNAYATLIENDSNPEVR_ 0 0 1 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1068.1733 3 1067.83834 3200.49319 58129.46 0.93299 0.00099628 -0.18366 -0.00019612 0.74933 0.00080016 1068.50642175416 1074.18024500632 111.48 0.54488 111.48 111.21 111.75 0 181 38 6 0 0 0 1.3886E-06 2 70249 40.92 40.92 1 0.77231 0.91405 0 39727000 22388000 17339000 23164 1995 8727 8930 36341;36342 36341 LQDPKDDECPVVNAYATLIENDSNPEVR 28 1 1 Unmodified _LQDPKDDECPVVNAYATLIENDSNPEVR_ 0 0 1 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1068.1727 3 1067.83834 3200.49319 58543.75 0.36832 0.00039331 0.75004 0.00080092 1.1184 0.0011942 1068.17286315545 1074.1804215773 110.9 0.45243 110.9 110.69 111.14 7.6294E-06 190 33 7 0 0 0 4.5263E-16 1 71500 69.439 63.72 1 0.76257 0.88365 0 34798000 18223000 16574000 23165 1995 8727 8930 36343 36343 LQDPKDDECPVVNAYATLIENDSNPEVR 28 1 1 Unmodified _LQDPKDDECPVVNAYATLIENDSNPEVR_ 0 0 1 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1068.175 3 1067.83834 3200.49319 58071.09 0.39791 0.0004249 0.008412 8.9826E-06 0.40632 0.00043389 1068.17294888948 1074.18009845671 122.42 0.76076 122.42 122.16 122.93 -7.6294E-06 332 37 14 0 0 0 5.2541E-19 2 72958 77.065 77.065 1 1.3922 1.2491 0 92298000 37856000 54442000 23166 1995 8727 8930 36344;36345 36345 LQDPKDDECPVVNAYATLIENDSNPEVR 28 1 1 Unmodified _LQDPKDDECPVVNAYATLIENDSNPEVR_ 0 0 1 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1068.1761 3 1067.83834 3200.49319 58315.97 0.37748 0.00040309 -0.021445 -2.2899E-05 0.35604 0.00038019 1068.17303146874 1074.18021349387 122.29 0.81586 122.29 122.04 122.86 0 332 41 14 0 0 0 1.3645E-10 2 71935 56.573 56.573 1 1.4232 1.2174 0 107510000 42447000 65061000 23167 1995 8727 8930 36346;36347 36347 LQDVFEFR 8 0 1 Unmodified _LQDVFEFR_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.273 2 527.271824 1052.5291 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.502 1 89.502 89.002 90.002 0 0 0 0 0.005812 1 54033 82.452 33.949 1 23168 367 8728 8931 36348 36348 LQDVFEFR 8 0 1 Unmodified _LQDVFEFR_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.2722 2 527.271824 1052.5291 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.567 1 88.567 88.067 89.067 0 0 0 0 0.0038412 1 54626 94.114 43.149 1 23169 367 8728 8931 36349 36349 LQDVFEFR 8 0 1 Unmodified _LQDVFEFR_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.2719 2 527.271824 1052.5291 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.59 1 88.59 88.09 89.09 0 0 0 0 0.0064976 1 54641 81.548 35.83 1 23170 367 8728 8931 36350 36350 LQEAGILSAEELQR 14 0 1 Unmodified _LQEAGILSAEELQR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.9219 2 778.917569 1555.82059 68993.83 0.75192 0.00058569 -0.13299 -0.00010359 0.61894 0.0004821 778.917393844683 783.921606442297 98.837 0.74888 98.837 98.46 99.209 0 182 44 6 0 0 0 0.00010634 2 55704 98.407 77.573 1 2.2822 1.9081 0 10337000 3092800 7243900 23171 1754 8729 8932 36351;36352 36351 LQEAGILSAEELQR 14 0 1 Unmodified _LQEAGILSAEELQR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.9223 2 778.917569 1555.82059 68733.15 0.66872 0.00052087 0.11204 8.7272E-05 0.78076 0.00060815 779.418997184926 783.921730249084 98.795 0.67525 98.795 98.468 99.143 0 202 38 8 0 0 0 3.1186E-09 2 54812 113.95 83.057 1 2.0121 1.6405 0 9518900 3003800 6515100 23172 1754 8729 8932 36353;36354 36353 LQEALGMHESK 11 1 0 Oxidation (M) _LQEALGM(ox)HESK_ LQEALGM(1)HESK LQEALGM(69.01)HESK 0 1 0 H7BXY3;A0A024R2T6;Q7L2E3;Q6W6M7 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8159 2 629.808445 1257.60234 76891.45 0.11895 7.4916E-05 0.22997 0.00014484 0.34892 0.00021975 629.808334418025 633.815797326334 19.774 0.19888 19.774 19.689 19.888 0 25 7 5 0 0 0 0.00060139 2 6163 69.01 69.01 1 1.9879 1.9852 0 14173000 4223000 9949800 23173 122 8730 8933 36355;36356 36355 105 LQEALGMHESK 11 1 0 Oxidation (M) _LQEALGM(ox)HESK_ LQEALGM(1)HESK LQEALGM(44.85)HESK 0 1 0 H7BXY3;A0A024R2T6;Q7L2E3;Q6W6M7 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.8794 3 420.208055 1257.60234 90903.94 -0.32478 -0.00013648 -0.13529 -5.6852E-05 -0.46008 -0.00019333 420.20762798293 422.879447936948 19.779 0.24557 19.779 19.689 19.934 0 39 9 6 0 0 0 0.0046465 1 6168 44.847 37.123 1 1.1415 1.1413 0 15351000 6258700 9092700 23174 122 8730 8933 36357 36357 105 LQEDTSAHQNVVAETLSALENK 22 1 0 Unmodified _LQEDTSAHQNVVAETLSALENK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.7416 3 799.734592 2396.18195 68350.91 0.99905 0.00079898 -0.10771 -8.6136E-05 0.89135 0.00071284 800.068552900933 802.740258067429 107.26 0.62569 107.26 107.07 107.69 0 197 42 9 0 0 0 3.8801E-09 2 68413 77.681 64.089 1 1.1357 1.2204 0 37489000 15984000 21505000 23175 1581 8731 8934 36358;36359 36358 LQEEIPVLHEEQELLPNVK 19 1 0 Unmodified _LQEEIPVLHEEQELLPNVK_ 0 0 0 A0A087X0P0;Q02224 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.0809 3 753.073997 2256.20016 72130.16 0.70614 0.00053177 -0.009551 -7.1926E-06 0.69658 0.00052458 753.743069259123 755.745540263634 120.66 0.36946 120.66 120.48 120.85 0 48 17 5 0 0 0 0.047142 1 71653 12.848 12.848 1 2.0465 1.5871 0 3494100 1069000 2425100 23176 445 8732 8935 36360 36360 LQEELSENDK 10 1 0 Unmodified _LQEELSENDK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.7946 2 602.788232 1203.56191 78190.9 0.63391 0.00038211 -0.048593 -2.9291E-05 0.58532 0.00035282 602.788217047126 606.795218045149 26.937 0.58763 26.937 26.708 27.295 1.9073E-06 192 34 8 0 0 0 9.6642E-52 2 12158 203.29 163.02 1 0.86646 0.99181 0 187970000 101770000 86193000 23177 69 8733 8936 36361;36362 36362 LQEELSENDK 10 1 0 Unmodified _LQEELSENDK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.7944 2 602.788232 1203.56191 77932.95 0.62237 0.00037516 0.17839 0.00010753 0.80076 0.00048269 602.78819492707 606.795404688142 26.581 0.50903 26.581 26.374 26.883 0 188 26 12 0 0 0 4.3406E-79 2 11880 228.31 194.12 1 0.93297 1.0923 0 306840000 160610000 146230000 23178 69 8733 8936 36363;36364 36364 LQEELSENDK 10 1 0 Unmodified _LQEELSENDK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.7949 2 602.788232 1203.56191 76835.54 0.39139 0.00023593 0.05908 3.5613E-05 0.45047 0.00027154 602.788281413004 606.795312585743 30.618 0.78931 30.618 30.364 31.154 0 226 49 7 0 0 0 0.00026732 1 12627 91.867 76.716 1 1.7527 1.4249 0 29125000 10153000 18972000 23179 69 8733 8936 36365 36365 LQEELSENDK 10 1 0 Unmodified _LQEELSENDK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.7889 2 602.788232 1203.56191 76724.06 0.36945 0.0002227 0.14435 8.7015E-05 0.51381 0.00030972 602.788362478952 606.795293322131 30.81 0.65609 30.81 30.488 31.144 0 175 35 7 0 0 0 0.0010168 2 12275 77.533 63.954 1 1.8233 1.4838 0 25366000 9389600 15976000 23180 69 8733 8936 36366;36367 36367 LQEELSENDKK 11 2 0 Unmodified _LQEELSENDKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.8505 2 666.835714 1331.65687 74250.52 0.60935 0.00040634 0.14249 9.502E-05 0.75184 0.00050136 666.836131884665 674.849723225271 20.023 0.41784 20.023 19.787 20.205 0 35 12 6 0 0 0 0.0004376 1 6542 90.15 90.15 1 0.94509 1.1157 0 55446000 29275000 26171000 23181 69 8734 8937 36368 36368 LQEELSENDKK 11 2 0 Unmodified _LQEELSENDKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.2361 3 444.892901 1331.65687 89116.06 -0.17868 -7.9495E-05 0.081638 3.632E-05 -0.097045 -4.3174E-05 444.892924937572 450.235740652916 19.874 0.76138 19.874 19.689 20.45 0 109 28 9 0 0 0 1.3207E-08 2 6188 115 99.627 1 0.79557 0.92409 0 112460000 64132000 48324000 23182 69 8734 8937 36369;36370 36369 LQEELSENDKK 11 2 0 Unmodified _LQEELSENDKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.85 2 666.835714 1331.65687 74482.6 0.28995 0.00019335 -0.13163 -8.7772E-05 0.15832 0.00010558 666.835319020446 674.849795145896 19.853 0.58571 19.853 19.739 20.324 0 76 22 8 0 0 0 1.5437E-40 2 6229 192.12 192.12 1 0.89312 1.0358 0 76772000 39200000 37572000 23183 69 8734 8937 36371;36372 36372 LQEELSENDKK 11 2 0 Unmodified _LQEELSENDKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 450.2359 3 444.892901 1331.65687 89671.26 -0.33093 -0.00014723 0.34839 0.000155 0.017453 7.7647E-06 444.893121772773 450.23582251844 21.462 0.44215 21.462 21.296 21.738 1.9073E-06 81 14 9 0 0 0 0.0093934 1 6479 36.432 35.693 1 1.9336 1.6502 0 16850000 5641100 11209000 23184 69 8734 8937 36373 36373 LQEELSENDKK 11 2 0 Unmodified _LQEELSENDKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 450.2357 3 444.892901 1331.65687 89783.48 -0.3393 -0.00015095 0.085963 3.8244E-05 -0.25333 -0.00011271 444.892900000942 450.23574778273 21.328 0.36341 21.328 21.208 21.571 0 93 15 8 0 0 0 0.00050536 1 5977 50.149 50.149 1 1.9343 1.6365 0 13715000 4155700 9559400 23185 69 8734 8937 36374 36374 LQEEMLQR 8 0 1 Oxidation (M) _LQEEM(ox)LQR_ LQEEM(1)LQR LQEEM(113.89)LQR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.7702 2 531.766049 1061.51754 82615.45 0.12898 6.8587E-05 -0.43423 -0.00023091 -0.30525 -0.00016232 531.765801190916 536.76998725202 24.762 0.58072 24.762 24.449 25.029 -1.9073E-06 108 27 8 0 0 0 0.00049985 1 10411 113.89 59.732 1 1.3245 1.4753 0 81183000 37107000 44076000 23186 1457 8735 8938 36375 36375 1174 LQEEMLQR 8 0 1 Oxidation (M) _LQEEM(ox)LQR_ LQEEM(1)LQR LQEEM(98.3)LQR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.7657 2 531.766049 1061.51754 82668.62 0.55691 0.00029614 -0.029796 -1.5844E-05 0.52711 0.0002803 531.766004110417 536.770147614763 25.316 0.37268 25.316 25.113 25.486 0 88 17 7 0 0 0 0.0014344 1 10889 98.299 42.289 1 1.4296 1.6278 0 115700000 52093000 63608000 23187 1457 8735 8938 36376 36376 1174 LQEEMLQR 8 0 1 Oxidation (M) _LQEEM(ox)LQR_ LQEEM(1)LQR LQEEM(113.89)LQR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.7657 2 531.766049 1061.51754 82089.09 0.36615 0.00019471 -0.23112 -0.0001229 0.13503 7.1802E-05 531.765875983257 536.770141540241 24.52 0.66142 24.52 24.196 24.857 0 124 30 7 0 0 0 0.00049985 2 10216 113.89 51.993 1 1.4893 1.6985 0 96847000 40631000 56216000 23188 1457 8735 8938 36377;36378 36378 1174 LQEEMLQR 8 0 1 Oxidation (M) _LQEEM(ox)LQR_ LQEEM(1)LQR LQEEM(62.88)LQR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.7703 2 531.766049 1061.51754 NaN NaN NaN -0.3313 -0.00017618 NaN NaN NaN NaN 27.541 0.48243 27.541 27.373 27.856 0 0 0 0 0.0075046 1 10720 62.88 16.865 1 NaN NaN 0 2495500 0 2495500 23189 1457 8735 8938 36379 36379 1174 LQEEMLQR 8 0 1 Oxidation (M) _LQEEM(ox)LQR_ LQEEM(1)LQR LQEEM(70.52)LQR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.7703 2 531.766049 1061.51754 83833.38 0.13735 7.3036E-05 0.41689 0.00022169 0.55423 0.00029472 531.766198367701 536.770113676994 28.482 0.66106 28.482 28.083 28.744 0 126 36 6 0 0 0 0.0054159 1 10849 70.525 24.509 1 2.7277 2.3928 0 1851100 562360 1288800 23190 1457 8735 8938 36380 36380 1174 LQEEMLQR 8 0 1 Unmodified _LQEEMLQR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.7727 2 523.768591 1045.52263 NaN NaN NaN -0.58389 -0.00030582 NaN NaN NaN NaN 45.579 0.61609 45.579 45.335 45.951 0 0 0 0 0.009934 1 21838 77.674 21.663 1 NaN NaN 0 3225500 0 3225500 23191 1457 8735 8939 36381 36381 LQEEMLQR 8 0 1 Unmodified _LQEEMLQR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 528.7726 2 523.768591 1045.52263 83317.02 0.42678 0.00022354 -0.41703 -0.00021843 0.0097495 5.1065E-06 523.768430137061 528.772466376945 45.717 0.47865 45.717 45.504 45.983 3.8147E-06 112 29 6 0 0 0 0.0085084 1 21310 78.324 27.692 1 4.7108 4.1663 0 4047600 928850 3118800 23192 1457 8735 8939 36382 36382 LQEEMLQREEAENTLQSFR 19 0 2 Oxidation (M) _LQEEM(ox)LQREEAENTLQSFR_ LQEEM(1)LQREEAENTLQSFR LQEEM(74.95)LQREEAENTLQSFR 0 1 1 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.7195 3 789.713022 2366.11724 69516.25 0.75789 0.00059851 0.02865 2.2625E-05 0.78654 0.00062114 790.047190158527 796.385307586834 75.857 0.89697 75.857 75.319 76.216 0 235 75 6 0 0 0 2.2114E-06 1 44844 74.953 50.653 1 1.6375 1.7696 0 20036000 7907800 12128000 23193 1457 8736 8940 36383 36383 1174 LQEEMLQREEAENTLQSFR 19 0 2 Oxidation (M) _LQEEM(ox)LQREEAENTLQSFR_ LQEEM(1)LQREEAENTLQSFR LQEEM(43.16)LQREEAENTLQSFR 0 1 1 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.0471 3 789.713022 2366.11724 67987.05 0.66744 0.00052709 -0.31187 -0.00024629 0.35557 0.0002808 790.046895018712 796.719754567134 74.702 0.56748 74.702 74.449 75.017 7.6294E-06 209 50 6 0 0 0 8.7365E-05 1 45079 43.164 43.164 1 1.6702 1.8829 0 29440000 12674000 16767000 23194 1457 8736 8940 36384 36384 1174 LQEEMLQREEAENTLQSFR 19 0 2 Unmodified _LQEEMLQREEAENTLQSFR_ 0 0 1 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.3892 3 784.381384 2350.12232 69209.77 0.90863 0.00071271 1.3074 0.0010255 2.2161 0.0017382 785.050406205264 791.054874948855 96.832 0.66165 96.832 96.647 97.309 -7.6294E-06 105 33 7 0 0 0 0.033196 1 54363 19.42 16.322 1 4.5248 3.9071 0 5128900 961150 4167800 23195 1457 8736 8941 36385 36385 LQEEMLQREEAENTLQSFR 19 0 2 Unmodified _LQEEMLQREEAENTLQSFR_ 0 0 1 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.3908 3 784.381384 2350.12232 67957.85 0.50789 0.00039838 1.2577 0.00098654 1.7656 0.0013849 784.71579073849 791.38907230545 96.683 0.38485 96.683 96.522 96.907 0 79 18 7 0 0 0 1.8249E-05 2 53539 50.957 50.957 1 4.3271 3.9157 0 4173900 918140 3255800 23196 1457 8736 8941 36386;36387 36387 LQEIHPECGPCK 12 1 0 Unmodified _LQEIHPECGPCK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3464 2 734.339586 1466.66462 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.244 1 27.244 26.744 27.744 1.9073E-06 0 0 0 0.011247 1 12496 56.359 29.244 1 23197 1699 8737 8942 36388 36388 LQELEANPPSDVYLSSR 17 0 1 Unmodified _LQELEANPPSDVYLSSR_ 0 0 0 A8K2R3;O60341 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 959.9841 2 959.481262 1916.94797 63851.53 0.64803 0.00062177 -0.02227 -2.1368E-05 0.62576 0.00060041 959.982390591032 964.485972311529 86.537 0.66789 86.537 86.125 86.792 0 174 49 6 0 0 0 0.00021292 1 52058 65.563 59.839 1 0.94804 0.98309 0 13685000 6072600 7612300 23198 711 8738 8943 36389 36389 LQELEANPPSDVYLSSR 17 0 1 Unmodified _LQELEANPPSDVYLSSR_ 0 0 0 A8K2R3;O60341 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 964.4867 2 959.481262 1916.94797 63474.31 0.73792 0.00070802 -0.23955 -0.00022984 0.49837 0.00047818 959.982435848713 964.485497545332 85.797 0.39618 85.797 85.552 85.948 0 99 28 5 0 0 0 8.9741E-05 2 52783 73.386 61.221 1 0.72354 0.7329 0 20104000 10903000 9200800 23199 711 8738 8943 36390;36391 36391 LQELEGQIADLK 12 1 0 Unmodified _LQELEGQIADLK_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.8732 2 678.872099 1355.72965 74225.75 0.86085 0.00058441 0.22676 0.00015394 1.0876 0.00073834 678.872223204429 682.879637666747 82.845 0.8552 82.845 82.55 83.405 0 273 72 6 0 0 0 3.4353E-29 2 49501 165.66 80.504 1 0.80228 0.90591 0 108320000 56125000 52190000 23200 1803 8739 8944 36392;36393 36393 LQELSEQQETK 11 1 0 Unmodified _LQELSEQQETK_ 0 0 0 REV__Q9NSI9 REV__Q9NSI9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.8361 2 666.835714 1331.65687 74229.6 0.1589 0.00010596 0.15826 0.00010554 0.31716 0.00021149 666.836100177625 671.343719880151 21.489 0.29897 21.489 21.354 21.653 0 41 9 7 0 0 0 0.025895 1 6529 40.994 30.47 1 0.081454 0.064596 0 4404000 4133700 270250 + 23201 2184 8740 8945 36394 36394 LQELSEQQETK 11 1 0 Unmodified _LQELSEQQETK_ 0 0 0 REV__Q9NSI9 REV__Q9NSI9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.8361 2 666.835714 1331.65687 74235.04 0.14379 9.5882E-05 0.41271 0.00027521 0.5565 0.00037109 666.836052184243 670.842881465368 21.366 0.32115 21.366 21.25 21.571 0 58 13 6 0 0 0 0.0057959 1 6008 55.567 47.347 1 0.092552 0.072462 0 3746000 3401700 344300 + 23202 2184 8740 8945 36395 36395 LQELTPSSGDPGEHDPASTHK 21 1 0 Unmodified _LQELTPSSGDPGEHDPASTHK_ 0 0 0 Q59GW5;D3DTY9 Q59GW5 Q59GW5 TRIM25 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.019 3 735.013578 2202.0189 NaN NaN NaN -0.26273 -0.00019311 NaN NaN NaN NaN 31.938 0.24838 31.938 31.829 32.078 1.9073E-06 0 0 0 0.0047697 1 15752 33.833 24.786 1 NaN NaN 0 4920300 0 4920300 23203 1802 8741 8946 36396 36396 LQELTPSSGDPGEHDPASTHK 21 1 0 Unmodified _LQELTPSSGDPGEHDPASTHK_ 0 0 0 Q59GW5;D3DTY9 Q59GW5 Q59GW5 TRIM25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.6847 3 735.013578 2202.0189 73483.95 0.66332 0.00048755 -0.46367 -0.0003408 0.19965 0.00014675 735.347612310686 737.6846217199 30.998 0.20761 30.998 30.892 31.1 0 38 16 4 0 0 0 0.00019659 2 15267 35.834 35.834 1 2.1392 2.1354 0 14417000 4781700 9635400 23204 1802 8741 8946 36397;36398 36397 LQENFSLDLLK 11 1 0 Unmodified _LQENFSLDLLK_ 0 0 0 A0A024R473;Q9H9J2 A0A024R473 A0A024R473 MRPL44 39S ribosomal protein L44, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.3711 2 660.36391 1318.71327 75503.33 1.117 0.00073762 -0.39715 -0.00026226 0.71983 0.00047535 660.363628880669 664.371051050481 111.51 0.70441 111.51 111.12 111.83 0 164 50 5 0 0 0 0.0042422 1 70131 58.37 41.532 1 0.54369 0.55911 0 28761000 17956000 10805000 23205 149 8742 8947 36399 36399 LQENFSLDLLK 11 1 0 Unmodified _LQENFSLDLLK_ 0 0 0 A0A024R473;Q9H9J2 A0A024R473 A0A024R473 MRPL44 39S ribosomal protein L44, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.364 2 660.36391 1318.71327 NaN NaN NaN -0.42669 -0.00028177 NaN NaN NaN NaN 110.94 0.76791 110.94 110.54 111.3 0 0 0 0 0.0082394 1 71357 61.353 25.445 1 NaN NaN 0 8899000 8899000 0 23206 149 8742 8947 36400 36400 LQENPESCLSIVR 13 0 1 Unmodified _LQENPESCLSIVR_ 0 0 0 B4DZG2;A0A024R8C1;Q15361;A0A087WY09 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.8951 2 772.890497 1543.76644 69345.16 0.92565 0.00071542 -0.89656 -0.00069295 0.029083 2.2478E-05 773.391762176722 777.893654955598 91.257 0.4339 91.257 91.06 91.494 0 102 28 6 0 0 0 0.046277 1 50659 30.059 15.639 1 1.9898 1.673 0 4413400 1621100 2792400 23207 247 8743 8948 36401 36401 LQETLSAADR 10 0 1 Unmodified _LQETLSAADR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.2875 2 552.288202 1102.56185 82911.36 0.55726 0.00030777 -0.012763 -7.0489E-06 0.5445 0.00030072 552.288229248895 557.292183088107 34.912 0.78816 34.912 34.43 35.218 0 258 67 6 0 0 0 7.4352E-06 2 17399 107.15 33.027 1 0.62365 0.66565 0 44340000 25943000 18396000 23208 1665 8744 8949 36402;36403 36402 LQETLSAADR 10 0 1 Unmodified _LQETLSAADR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.2879 2 552.288202 1102.56185 81162.16 0.58645 0.00032389 -0.02243 -1.2388E-05 0.56402 0.0003115 552.288274594293 557.292237528654 34.206 0.57413 34.206 33.786 34.36 0 184 42 6 0 0 0 6.531E-08 1 17190 112.75 41.247 1 0.66181 0.76144 0 74994000 47782000 27211000 23209 1665 8744 8949 36404 36404 LQETLSAADR 10 0 1 Unmodified _LQETLSAADR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.2886 2 552.288202 1102.56185 80383.95 0.21723 0.00011997 0.37519 0.00020721 0.59242 0.00032719 552.288465823865 557.291912943127 40.062 0.7615 40.062 39.773 40.534 0 220 58 7 0 0 0 1.2036E-05 1 18346 103.7 32.781 1 0.3314 0.27148 0 16589000 12421000 4167600 23210 1665 8744 8949 36405 36405 LQETSSQSYVEEQK 14 1 0 Unmodified _LQETSSQSYVEEQK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.3932 2 828.391581 1654.76861 67642.22 0.56897 0.00047133 -0.14827 -0.00012282 0.4207 0.0003485 828.892704313925 832.398655714981 30.823 0.56635 30.823 30.412 30.979 0 174 50 6 0 0 0 0.00017891 1 14937 72.34 66.559 1 0.78207 0.82629 0 16298000 10863000 5434200 23211 1916 8745 8950 36406 36406 LQETSSQSYVEEQK 14 1 0 Unmodified _LQETSSQSYVEEQK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.3992 2 828.391581 1654.76861 NaN NaN NaN 0.35421 0.00029342 NaN NaN NaN NaN 30.62 0.24742 30.62 30.438 30.686 0 0 0 0 2.5891E-06 1 14991 100.04 54.9 1 NaN NaN 0 3797700 0 3797700 23212 1916 8745 8950 36407 36407 LQETSSQSYVEEQK 14 1 0 Unmodified _LQETSSQSYVEEQK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.9008 2 828.391581 1654.76861 NaN NaN NaN 0.55538 0.00046007 NaN NaN NaN NaN 30.238 0.4692 30.238 29.964 30.433 -1.9073E-06 0 0 0 0.00065772 1 14614 77.597 59.538 1 NaN NaN 0 10185000 0 10185000 23213 1916 8745 8950 36408 36408 LQETSSQSYVEEQK 14 1 0 Unmodified _LQETSSQSYVEEQK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 828.3912 2 828.391581 1654.76861 67479.56 0.43525 0.00036056 -0.23442 -0.00019419 0.20083 0.00016637 828.391231996384 832.399114596763 36.066 0.51221 36.066 35.756 36.268 -3.8147E-06 248 41 8 0 0 0 0.00013516 2 16080 79.283 79.283 1 1.4784 1.1573 0 11680000 4391500 7288300 23214 1916 8745 8950 36409;36410 36409 LQETSSQSYVEEQK 14 1 0 Unmodified _LQETSSQSYVEEQK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;B4DUY9;H0YFD2;B7ZLF4;F8WFC1 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.3992 2 828.391581 1654.76861 68169.42 0.64218 0.00053197 -0.29933 -0.00024796 0.34285 0.00028401 828.391479318136 832.39869481349 36.322 0.47748 36.322 36.059 36.537 0 251 43 8 0 0 0 3.4207E-09 2 15777 112.84 112.84 1 1.549 1.2761 0 10653000 3914700 6737900 23215 1916 8745 8950 36411;36412 36412 LQEVDSLWK 9 1 0 Unmodified _LQEVDSLWK_ 0 0 0 Q9Y2X3;B4DUY3;F8WED0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.2983 2 559.298039 1116.58152 80570.82 0.91092 0.00050948 -1.2782 -0.00071488 -0.36725 -0.0002054 559.297819673032 563.303547639452 80.701 1.3097 80.701 80.081 81.391 0 477 111 8 0 0 0 2.3878E-05 1 47911 114.89 47.862 1 0.75562 0.85075 0 122060000 71478000 50585000 23216 2129 8746 8951 36413 36413 LQEVDSLWK 9 1 0 Unmodified _LQEVDSLWK_ 0 0 0 Q9Y2X3;B4DUY3;F8WED0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.2982 2 559.298039 1116.58152 NaN NaN NaN -0.14715 -8.2299E-05 NaN NaN NaN NaN 79.677 0.94958 79.677 79.285 80.235 0 0 0 0 9.8046E-06 1 48343 114.89 53.933 1 NaN NaN 0 76495000 76495000 0 23217 2129 8746 8951 36414 36414 LQEVDSLWK 9 1 0 Unmodified _LQEVDSLWK_ 0 0 0 Q9Y2X3;B4DUY3;F8WED0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.2982 2 559.298039 1116.58152 81187.66 0.57064 0.00031916 -0.40593 -0.00022704 0.16471 9.2122E-05 559.297926162527 563.304520527558 92.072 0.83974 92.072 91.688 92.527 0 275 49 8 0 0 0 0.0010522 1 51163 90.657 54.261 1 1.1188 0.86785 0 14054000 6499200 7555100 23218 2129 8746 8951 36415 36415 LQEVDSLWK 9 1 0 Unmodified _LQEVDSLWK_ 0 0 0 Q9Y2X3;B4DUY3;F8WED0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.2984 2 559.298039 1116.58152 81022.34 0.44612 0.00024951 -0.50259 -0.0002811 -0.056472 -3.1585E-05 559.297913379009 563.304362185238 92.015 0.91371 92.015 91.593 92.507 0 249 49 8 0 0 0 0.0020972 1 50247 76.827 37.864 1 1.1304 0.93325 0 11353000 5594000 5758800 23219 2129 8746 8951 36416 36416 LQEVIETLLSLEK 13 1 0 Unmodified _LQEVIETLLSLEK_ 0 0 0 A0A0S2Z489;O00232;A0A0S2Z476 A0A0S2Z489 A0A0S2Z489 PSMD12 26S proteasome non-ATPase regulatory subunit 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.4394 2 757.937439 1513.86033 71822.78 0.44172 0.00033479 0.63585 0.00048194 1.0776 0.00081673 757.937600324957 761.944864884585 128.49 0.54691 128.49 128.25 128.79 0 181 35 8 0 0 0 7.4082E-06 2 83721 103.34 83.038 1 2.2483 2.35 0 11911000 3508600 8402500 23220 558 8747 8952 36417;36418 36418 LQEVIETLLSLEK 13 1 0 Unmodified _LQEVIETLLSLEK_ 0 0 0 A0A0S2Z489;O00232;A0A0S2Z476 A0A0S2Z489 A0A0S2Z489 PSMD12 26S proteasome non-ATPase regulatory subunit 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.946 2 757.937439 1513.86033 71924.8 0.9381 0.00071102 0.24199 0.00018342 1.1801 0.00089444 757.937464200436 761.944790548641 128.08 0.50562 128.08 127.89 128.4 0 155 30 7 0 0 0 3.4264E-06 2 85497 108.37 81.858 1 2.0131 2.0095 0 14645000 4594700 10050000 23221 558 8747 8952 36419;36420 36419 LQEVLQSESDQLK 13 1 0 Unmodified _LQEVLQSESDQLK_ 0 0 0 A0A087X0P0;Q02224 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.9044 2 758.896303 1515.77805 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.135 1 62.135 61.635 62.635 0 0 0 0 0.0015018 1 36443 72.652 43.179 1 23222 445 8748 8953 36421 36421 LQEVLQSESDQLK 13 1 0 Unmodified _LQEVLQSESDQLK_ 0 0 0 A0A087X0P0;Q02224 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 758.8974 2 758.896303 1515.77805 NaN NaN NaN 0.11016 8.3598E-05 NaN NaN NaN NaN 73.103 0.44129 73.103 72.918 73.359 0 0 0 0 0.022198 1 38627 46.796 34.22 1 NaN NaN 0 854550 854550 0 23223 445 8748 8953 36422 36422 LQFIFTNIDPK 11 1 0 Unmodified _LQFIFTNIDPK_ 0 0 0 Q9HBM1 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.377 2 668.368995 1334.72344 75460.91 0.86683 0.00057936 -0.24075 -0.00016091 0.62608 0.00041845 668.368966541631 672.376267403463 114.08 0.50394 114.08 113.83 114.33 7.6294E-06 155 36 6 0 0 0 0.0040596 2 72368 58.699 58.699 1 0.84291 0.85957 0 10415000 6373900 4041100 23224 2050 8749 8954 36423;36424 36424 LQFIFTNIDPK 11 1 0 Unmodified _LQFIFTNIDPK_ 0 0 0 Q9HBM1 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3701 2 668.368995 1334.72344 76527.7 0.54251 0.0003626 0.074649 4.9893E-05 0.61716 0.00041249 668.369346775588 672.375991614532 113.52 0.55034 113.52 113.22 113.77 0 145 38 6 0 0 0 0.0011084 2 73648 70.028 70.028 1 0.91576 0.9343 0 12057000 6548700 5508600 23225 2050 8749 8954 36425;36426 36425 LQFIFTNIDPK 11 1 0 Unmodified _LQFIFTNIDPK_ 0 0 0 Q9HBM1 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.3699 2 668.368995 1334.72344 74536.38 0.75725 0.00050612 0.057319 3.8311E-05 0.81457 0.00054443 668.369025435754 672.375897908616 125.17 0.48579 125.17 124.94 125.42 7.6294E-06 80 20 5 0 0 0 0.0080859 2 74206 51.436 51.436 1 1.0086 0.8279 0 5253700 2622200 2631500 23226 2050 8749 8954 36427;36428 36428 LQFLFAK 7 1 0 Unmodified _LQFLFAK_ 0 0 0 Q7Z3K3;B4DSK8;H0YCT3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.7599 2 433.760364 865.506175 94855.82 0.039035 1.6932E-05 0.41248 0.00017892 0.45152 0.00019585 433.760362162024 437.76755085241 94.98 0.75014 94.98 94.732 95.482 7.6294E-06 128 58 4 0 0 0 0.026941 2 57694 83.287 44.266 1 0.6253 0.61865 0 8332100 3924500 4407600 23227 1874 8750 8955 36429;36430 36429 LQFLTSK 7 1 0 Unmodified _LQFLTSK_ 0 0 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.7473 2 418.747453 835.480354 94294.45 0.20409 8.5462E-05 -0.22959 -9.6141E-05 -0.025503 -1.0679E-05 418.747228832633 422.75430622751 59.313 0.5476 59.313 58.994 59.542 0 147 41 5 0 0 0 0.025391 1 33834 89.123 17.174 1 0.93419 0.91561 0 21033000 10264000 10769000 23228 1924 8751 8956 36431 36431 LQFLTSK 7 1 0 Unmodified _LQFLTSK_ 0 0 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.7473 2 418.747453 835.480354 94376.63 0.25799 0.00010803 -0.20895 -8.7498E-05 0.049038 2.0534E-05 418.747239323507 422.754326655921 58.211 0.45525 58.211 57.919 58.374 0 104 33 4 0 0 0 0.01285 1 33723 104.45 27.601 1 0.89865 0.95725 0 23245000 13001000 10244000 23229 1924 8751 8956 36432 36432 LQGAASHVPEGFDPTGPAGLGRPTPGLSQGPGK 33 1 1 Unmodified _LQGAASHVPEGFDPTGPAGLGRPTPGLSQGPGK_ 0 0 1 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.4088 4 789.157354 3152.60031 73413.32 0.56854 0.00044867 -0.08019 -6.3282E-05 0.48835 0.00038539 789.408031476207 793.914325117319 82.114 0.46519 82.114 81.823 82.288 0 116 40 7 0 0 0 0.00024392 1 50173 25.376 19.656 1 0.54773 0.62305 0 18773000 10210000 8563200 23230 631 8752 8957 36433 36433 LQGAASHVPEGFDPTGPAGLGRPTPGLSQGPGK 33 1 1 Unmodified _LQGAASHVPEGFDPTGPAGLGRPTPGLSQGPGK_ 0 0 1 A0A1B0GV09;Q9H9B1;A0A0C4DGF8;A0A1B0GU48 A0A1B0GV09 A0A1B0GV09 EHMT1 Histone-lysine N-methyltransferase EHMT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.9163 4 789.157354 3152.60031 67394.45 0.71547 0.00056461 0.30305 0.00023915 1.0185 0.00080377 789.40884296513 793.913222796216 94.845 0.45435 94.845 94.565 95.019 0 145 27 8 0 0 0 0.0040663 3 52198 22.197 22.197 1 0.85211 0.71587 0 4740900 2736700 2004200 23231 631 8752 8957 36434;36435;36436 36434 LQGDANNLHGFEVDSR 16 0 1 Unmodified _LQGDANNLHGFEVDSR_ 0 0 0 C9JLU1;P52434 C9JLU1 C9JLU1 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.2841 3 591.283451 1770.82852 79768.17 0.40119 0.00023722 0.73123 0.00043236 1.1324 0.00066958 591.283648249284 594.619776641544 54.865 0.53257 54.865 54.623 55.155 0 200 51 5 0 0 0 0.00011852 1 30815 51.265 45.138 1 1.4784 1.5485 0 39147000 13185000 25961000 23232 1138 8753 8958 36437 36437 LQGDANNLHGFEVDSR 16 0 1 Unmodified _LQGDANNLHGFEVDSR_ 0 0 0 C9JLU1;P52434 C9JLU1 C9JLU1 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.6204 3 591.283451 1770.82852 78889.8 0.65596 0.00038786 0.25081 0.0001483 0.90678 0.00053616 591.283380250929 594.619642883453 53.848 0.52488 53.848 53.638 54.163 3.8147E-06 233 49 6 0 0 0 7.2378E-05 1 30727 58.246 48.716 1 1.34 1.4641 0 37129000 12912000 24217000 23233 1138 8753 8958 36438 36438 LQGDANNLHGFEVDSR 16 0 1 Unmodified _LQGDANNLHGFEVDSR_ 0 0 0 C9JLU1;P52434 C9JLU1 C9JLU1 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 591.2838 3 591.283451 1770.82852 79418.13 0.36372 0.00021506 -0.20713 -0.00012247 0.15658 9.2584E-05 591.283496793974 594.619530519453 64.219 0.73248 64.219 63.957 64.689 0 208 54 7 0 0 0 0.03168 1 33008 19.39 19.39 1 1.1789 0.98575 0 3685800 1697700 1988100 23234 1138 8753 8958 36439 36439 LQGEIAHVK 9 1 0 Unmodified _LQGEIAHVK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.7875 2 497.787641 993.56073 86730.03 0.071758 3.572E-05 0.12707 6.3254E-05 0.19883 9.8975E-05 497.787626927502 501.794191926465 23.565 0.39912 23.565 23.414 23.813 0 65 18 6 0 0 0 0.0004062 1 9393 99.7 44.914 1 0.028679 0.032377 0 108910000 107220000 1693000 + 23235 1166 8754 8959 36440 36440 LQGEIAHVK 9 1 0 Unmodified _LQGEIAHVK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.7879 2 497.787641 993.56073 86642.66 -0.068349 -3.4024E-05 0.16027 7.9781E-05 0.091922 4.5758E-05 497.787681533137 501.794698102698 23.141 0.40857 23.141 22.994 23.402 0 56 17 6 0 0 0 8.2055E-08 1 9009 141.52 75.717 1 0.015919 0.017789 0 94833000 93312000 1520900 + 23236 1166 8754 8959 36441 36441 LQGEIAHVK 9 1 0 Unmodified _LQGEIAHVK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.7877 2 497.787641 993.56073 NaN NaN NaN 0.10929 5.4401E-05 NaN NaN NaN NaN 25.579 0.45464 25.579 25.373 25.827 1.9073E-06 0 0 0 0.001033 1 9334 88.37 16.136 1 NaN NaN 0 13286000 13286000 0 + 23237 1166 8754 8959 36442 36442 LQGEIAHVK 9 1 0 Unmodified _LQGEIAHVK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.788 2 497.787641 993.56073 NaN NaN NaN 0.099548 4.9554E-05 NaN NaN NaN NaN 25.474 0.44437 25.474 25.3 25.744 1.9073E-06 0 0 0 0.00011004 1 8756 99.136 39.93 1 NaN NaN 0 11840000 11840000 0 + 23238 1166 8754 8959 36443 36443 LQGIDLDR 8 0 1 Unmodified _LQGIDLDR_ 0 0 0 Q92878 Q92878 Q92878 RAD50 DNA repair protein RAD50 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.261 2 465.256174 928.497795 NaN NaN NaN 0.45875 0.00021344 NaN NaN NaN NaN 56.817 0.48608 56.817 56.62 57.106 0 0 0 0 0.011064 1 32776 75.854 27.351 1 NaN NaN 0 6013400 0 6013400 23239 1953 8755 8960 36444 36444 LQGLSASDVTEQIIK 15 1 0 Unmodified _LQGLSASDVTEQIIK_ 0 0 0 Q9UBB5;O60535 Q9UBB5 Q9UBB5 MBD2;NY-CO-41 Methyl-CpG-binding domain protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 805.4484 2 801.440877 1600.8672 NaN NaN NaN 0.022902 1.8355E-05 NaN NaN NaN NaN 100 0.59647 100 99.769 100.37 0 0 0 0 5.1675E-07 1 62656 99.5 71.636 1 NaN NaN 0 30510000 0 30510000 23240 2096 8756 8961 36445 36445 LQGLSASDVTEQIIK 15 1 0 Unmodified _LQGLSASDVTEQIIK_ 0 0 0 Q9UBB5;O60535 Q9UBB5 Q9UBB5 MBD2;NY-CO-41 Methyl-CpG-binding domain protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 805.9493 2 801.440877 1600.8672 NaN NaN NaN 0.22674 0.00018172 NaN NaN NaN NaN 113.31 0.44361 113.31 113 113.44 0 0 0 0 0.00051602 1 65931 71.241 46.897 1 NaN NaN 0 3702800 0 3702800 23241 2096 8756 8961 36446 36446 LQGLSASDVTEQIIK 15 1 0 Unmodified _LQGLSASDVTEQIIK_ 0 0 0 Q9UBB5;O60535 Q9UBB5 Q9UBB5 MBD2;NY-CO-41 Methyl-CpG-binding domain protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 805.4506 2 801.440877 1600.8672 NaN NaN NaN 0.49615 0.00039763 NaN NaN NaN NaN 113.18 0.41857 113.18 112.98 113.4 -7.6294E-06 0 0 0 0.052594 1 64911 36.32 18.512 1 NaN NaN 0 3695300 0 3695300 23242 2096 8756 8961 36447 36447 LQGQITEGSNMIK 13 1 0 Oxidation (M) _LQGQITEGSNM(ox)IK_ LQGQITEGSNM(1)IK LQGQITEGSNM(74.53)IK 0 1 0 O95251;E7EUP3;B7Z4D9;B3KVJ2;B4DG18 O95251 O95251 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.8659 2 717.866491 1433.71843 NaN NaN NaN -0.095145 -6.8301E-05 NaN NaN NaN NaN 38.013 0.32514 38.013 37.799 38.125 -3.8147E-06 0 0 0 0.00050523 1 19380 74.533 43.46 1 NaN NaN 0 10458000 10458000 0 23243 1422 8757 8962 36448 36448 1119 LQGQITEGSNMIK 13 1 0 Oxidation (M) _LQGQITEGSNM(ox)IK_ LQGQITEGSNM(1)IK LQGQITEGSNM(84.31)IK 0 1 0 O95251;E7EUP3;B7Z4D9;B3KVJ2;B4DG18 O95251 O95251 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.868 2 717.866491 1433.71843 71260.37 0.97355 0.00069888 -0.13225 -9.4941E-05 0.84129 0.00060394 717.866626865524 721.873127667271 36.985 0.3286 36.985 36.841 37.169 0 131 26 6 0 0 0 7.2429E-05 2 19110 84.31 74.976 1 1.0304 1.036 0 27423000 13524000 13899000 23244 1422 8757 8962 36449;36450 36449 1119 LQGQLEQGDDTAAER 15 0 1 Unmodified _LQGQLEQGDDTAAER_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.8884 2 815.886997 1629.75944 67933.16 1.0138 0.00082715 -0.26695 -0.0002178 0.74686 0.00060935 815.8869397305 820.890819564878 29.984 0.66247 29.984 29.666 30.328 -1.9073E-06 244 51 6 0 0 0 1.4095E-70 2 14578 204.32 186.51 1 0.76363 0.83635 0 31959000 14607000 17352000 23245 1926 8758 8963 36451;36452 36452 LQGQLEQGDDTAAER 15 0 1 Unmodified _LQGQLEQGDDTAAER_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.8915 2 815.886997 1629.75944 67707.52 0.53124 0.00043343 0.07863 6.4153E-05 0.60987 0.00049759 815.887070265538 820.891072202036 35.303 0.54403 35.303 35.033 35.577 0 226 48 6 0 0 0 0.0043223 2 15611 39.561 24.022 1 0.62579 0.53788 0 6562500 4030100 2532400 23246 1926 8758 8963 36453;36454 36453 LQGQLEQGDDTAAER 15 0 1 Unmodified _LQGQLEQGDDTAAER_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.8925 2 815.886997 1629.75944 68122.42 0.72378 0.00059052 -0.2397 -0.00019557 0.48408 0.00039495 815.886803084547 820.890702797045 35.657 0.64943 35.657 35.399 36.049 0 255 54 7 0 0 0 0.015786 1 15331 32.859 24.13 1 0.60878 0.50757 0 6428700 3813700 2614900 23247 1926 8758 8963 36455 36455 LQGQLEQGDDTAAERLEK 18 1 1 Unmodified _LQGQLEQGDDTAAERLEK_ 0 0 1 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.6675 3 667.66763 1999.98106 73404.42 0.6307 0.0004211 -0.29486 -0.00019687 0.33584 0.00022423 667.667471284133 674.008809143648 54.438 0.40106 54.438 54.261 54.662 0 117 27 5 0 0 0 0.056362 1 27137 16.312 16.312 1 0.72617 0.62844 0 2584500 1379500 1205000 23248 1926 8759 8964 36456 36456 LQGSDLFWR 9 0 1 Unmodified _LQGSDLFWR_ 0 0 0 A0A024R250;Q76FK4;A6H8Z4 A0A024R250 A0A024R250 NOL8 Nucleolar protein 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.2919 2 561.290548 1120.56654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.552 1 89.552 89.052 90.052 0 0 0 0 0.0038685 1 55301 69.598 27.489 1 23249 104 8760 8965 36457 36457 LQIASDENYK 10 1 0 Unmodified _LQIASDENYK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8;A0A0D9SFF6 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.804 2 590.79586 1179.57717 79150.95 0.63252 0.00037369 -0.5695 -0.00033646 0.063014 3.7228E-05 590.795953105473 594.802913643828 41.862 0.37469 41.862 41.649 42.023 0 90 28 5 0 0 0 2.2373E-16 2 22124 157.91 100.63 1 1.6802 1.7451 0 11409000 4361600 7047400 23250 523 8761 8966 36458;36459 36459 LQIASDENYK 10 1 0 Unmodified _LQIASDENYK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8;A0A0D9SFF6 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.804 2 590.79586 1179.57717 NaN NaN NaN -0.47154 -0.00027858 NaN NaN NaN NaN 40.967 0.50593 40.967 40.711 41.217 3.8147E-06 0 0 0 2.3193E-22 1 21930 154.49 72.705 1 NaN NaN 0 7987000 0 7987000 23251 523 8761 8966 36460 36460 LQIASDENYK 10 1 0 Unmodified _LQIASDENYK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8;A0A0D9SFF6 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.7959 2 590.79586 1179.57717 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.917 1 40.917 40.417 41.417 0 0 0 0 0.00039201 1 21942 74.376 27.382 1 23252 523 8761 8966 36461 36461 LQIDEQLR 8 0 1 Unmodified _LQIDEQLR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;B4DFH8;B4DZ17;P51116;A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 X5DQX7;P51116;A0A0F7KYT8 P51116 FMR1;FXR2;FXR1 Fragile X mental retardation protein 1;Fragile X mental retardation syndrome-related protein 2;Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.7821 2 507.782556 1013.55056 84987.96 0.37199 0.00018889 0.094226 4.7846E-05 0.46622 0.00023674 507.782575922349 512.78665828602 58.125 1.005 58.125 57.707 58.712 0 410 81 8 0 0 0 0.0019394 2 32825 104.37 22.057 1 1.144 1.3234 0 163810000 71189000 92621000 23253 1593;1689;531 8762 8967 36462;36463 36463 LQIDEQLR 8 0 1 Unmodified _LQIDEQLR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;B4DFH8;B4DZ17;P51116;A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 X5DQX7;P51116;A0A0F7KYT8 P51116 FMR1;FXR2;FXR1 Fragile X mental retardation protein 1;Fragile X mental retardation syndrome-related protein 2;Fragile X mental retardation syndrome-related protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.7867 2 507.782556 1013.55056 NaN NaN NaN -0.081162 -4.1213E-05 NaN NaN NaN NaN 57.231 0.97517 57.231 56.789 57.764 3.8147E-06 0 0 0 0.0034538 1 32965 96.492 8.8521 1 NaN NaN 0 91121000 0 91121000 23254 1593;1689;531 8762 8967 36464 36464 LQIDEQLR 8 0 1 Unmodified _LQIDEQLR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;B4DFH8;B4DZ17;P51116;A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 X5DQX7;P51116;A0A0F7KYT8 P51116 FMR1;FXR2;FXR1 Fragile X mental retardation protein 1;Fragile X mental retardation syndrome-related protein 2;Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.7827 2 507.782556 1013.55056 83799.63 0.28417 0.0001443 -0.073535 -3.734E-05 0.21064 0.00010696 507.782466045275 512.786564537341 68.141 0.98622 68.141 67.649 68.635 7.6294E-06 354 71 7 0 0 0 0.0058868 1 34848 89.046 20.734 1 1.2203 1.0173 0 15883000 7327600 8555500 23255 1593;1689;531 8762 8967 36465 36465 LQIDVDGR 8 0 1 Unmodified _LQIDVDGR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2486 2 458.248349 914.482145 89820.63 0.059175 2.7117E-05 -0.064758 -2.9675E-05 -0.0055825 -2.5582E-06 458.248464366663 463.252356483624 52.375 0.76698 52.375 51.97 52.737 0 213 57 6 0 0 0 0.0099928 2 29019 73.26 7.584 1 1.3156 1.477 0 93065000 39323000 53742000 23256 1694 8763 8968 36466;36467 36467 LQIELGK 7 1 0 Unmodified _LQIELGK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.7472 2 400.747453 799.480354 97055.71 0.086245 3.4563E-05 0.45164 0.00018099 0.53789 0.00021556 400.747270139602 404.754440770917 60.462 0.79192 60.462 59.871 60.663 0 147 51 6 0 0 0 0.01535 1 35406 99.139 0 1 1.2232 1.3588 0 49855000 23464000 26392000 23257 1502 8764 8969 36468 36468 LQILTALCHR 10 0 1 Unmodified _LQILTALCHR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 412.2373 3 408.900897 1223.68086 NaN NaN NaN 0.058423 2.3889E-05 NaN NaN NaN NaN 78.767 0.47258 78.767 78.548 79.021 0 0 0 0 0.0091219 1 47797 51.927 25.412 1 NaN NaN 0 15834000 0 15834000 23258 2103 8765 8970 36469 36469 LQILTALCHR 10 0 1 Unmodified _LQILTALCHR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 412.2371 3 408.900897 1223.68086 NaN NaN NaN 0.07978 3.2622E-05 NaN NaN NaN NaN 91.604 0.86926 91.604 91.266 92.135 7.6294E-06 0 0 0 0.010933 1 50837 50.353 42.049 1 NaN NaN 0 9278400 0 9278400 23259 2103 8765 8970 36470 36470 LQIPEEER 8 0 1 Unmodified _LQIPEEER_ 0 0 0 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.2669 2 507.266739 1012.51892 83845.84 0.22142 0.00011232 -0.9344 -0.00047399 -0.71298 -0.00036167 507.267019488721 512.271246429468 47.079 0.73434 47.079 46.716 47.45 0 288 68 6 0 0 0 0.0075515 1 25457 82.452 68.295 1 0.86024 0.95043 0 56513000 33811000 22702000 23260 353 8766 8971 36471 36471 LQIPEEER 8 0 1 Unmodified _LQIPEEER_ 0 0 0 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.267 2 507.266739 1012.51892 84078.62 0.25082 0.00012723 -1.2796 -0.0006491 -1.0288 -0.00052186 507.266958826719 512.270698161777 46.096 0.92132 46.096 45.511 46.433 0 264 76 6 0 0 0 0.0012974 1 25292 110.31 93.77 1 0.86717 1.0055 0 58127000 30332000 27795000 23261 353 8766 8971 36472 36472 LQIQCVVEDDK 11 1 0 Unmodified _LQIQCVVEDDK_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;Q9BW34;E9PQZ1;H0YE72;H0YE58;A4D1M6;A0A024R3W7;P24534 D3DWK1;A0A024R3W7 D3DWK1 EEF1D;LOC392793;EEF1B2 Elongation factor 1-delta;Elongation factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.8409 2 673.834659 1345.65477 74306.9 0.13246 8.9253E-05 0.50265 0.0003387 0.63511 0.00042796 673.83583178373 677.841625773605 69.888 0.29337 69.888 69.744 70.037 0 119 27 7 0 0 0 4.3423E-17 1 40623 159.4 119.34 1 2.2805 2.4291 0 31885000 10179000 21706000 23262 875;142 8767 8972 36473 36473 LQIQCVVEDDK 11 1 0 Unmodified _LQIQCVVEDDK_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;Q9BW34;E9PQZ1;H0YE72;H0YE58;A4D1M6;A0A024R3W7;P24534 D3DWK1;A0A024R3W7 D3DWK1 EEF1D;LOC392793;EEF1B2 Elongation factor 1-delta;Elongation factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8417 2 673.834659 1345.65477 73894.09 0.31354 0.00021128 0.063034 4.2475E-05 0.37658 0.00025375 673.834653497886 677.841887663166 68.635 0.34263 68.635 68.513 68.856 0 120 30 6 0 0 0 6.4195E-13 1 40773 147.75 97.941 1 1.8316 2.0566 0 55581000 18110000 37470000 23263 875;142 8767 8972 36474 36474 LQIQCVVEDDK 11 1 0 Unmodified _LQIQCVVEDDK_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;Q9BW34;E9PQZ1;H0YE72;H0YE58;A4D1M6;A0A024R3W7;P24534 D3DWK1;A0A024R3W7 D3DWK1 EEF1D;LOC392793;EEF1B2 Elongation factor 1-delta;Elongation factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.8428 2 673.834659 1345.65477 77064.69 0.57652 0.00038848 0.63814 0.00043 1.2147 0.00081848 673.835817359667 677.841612847019 80.534 0.34875 80.534 80.37 80.719 0 66 24 4 0 0 0 0.060689 1 42674 33.229 22.399 1 1.2136 0.9481 0 3679000 1816300 1862700 23264 875;142 8767 8972 36475 36475 LQISHEAAACITGLR 15 0 1 Unmodified _LQISHEAAACITGLR_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.6275 3 547.291001 1638.85117 82174.72 0.54174 0.00029649 -0.37088 -0.00020298 0.17086 9.3512E-05 547.291161929653 550.626884069369 72.375 0.65069 72.375 72.113 72.764 0 279 59 6 0 0 0 4.9454E-06 2 43357 88.427 88.427 1 1.1823 1.3259 0 45408000 21126000 24281000 23265 1691 8768 8973 36476;36477 36476 LQISTNLQR 9 0 1 Unmodified _LQISTNLQR_ 0 0 0 Q92878 Q92878 Q92878 RAD50 DNA repair protein RAD50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.809 2 536.809105 1071.60366 81721.7 0.39201 0.00021043 -0.020784 -1.1157E-05 0.37122 0.00019928 536.809309745343 541.813245020833 55.223 0.42857 55.223 55.024 55.452 3.8147E-06 96 30 5 0 0 0 0.0043738 1 31558 69.423 20.005 1 1.1219 1.1307 0 19531000 8928100 10603000 23266 1953 8769 8974 36478 36478 LQLDLSSINISAK 13 1 0 Unmodified _LQLDLSSINISAK_ 0 0 0 A0A024R9G7;Q6PL18 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.4016 2 701.401024 1400.78749 74895.21 0.72877 0.00051116 -0.53876 -0.00037789 0.19001 0.00013327 701.400172009737 705.408002068172 110.18 0.30859 110.18 109.99 110.3 7.6294E-06 52 20 5 0 0 0 0.011912 1 69074 40.015 31.061 1 1.0976 1.0784 0 23333000 12045000 11287000 23267 278 8770 8975 36479 36479 LQLEACETR 9 0 1 Unmodified _LQLEACETR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.2806 2 560.27678 1118.53901 82903.45 0.55544 0.0003112 -0.21033 -0.00011784 0.34511 0.00019336 560.276749744514 565.280604541184 40.173 0.38606 40.173 40.013 40.399 0 97 32 4 0 0 0 0.00060281 1 20985 96.948 66.781 1 1.3949 1.4331 0 19464000 9048300 10416000 23268 1754 8771 8976 36480 36480 LQLEAIHK 8 1 0 Unmodified _LQLEAIHK_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6;H7C318;H7C1A9 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.2846 2 476.284734 950.554916 90956.2 0.27276 0.00012991 0.31219 0.00014869 0.58495 0.0002786 476.284795433394 480.291940030895 39.362 0.43745 39.362 39.169 39.606 0 113 35 5 0 0 0 0.0091076 2 20368 75.738 47.856 1 0.85398 0.83925 0 23416000 13505000 9911100 23269 1938 8772 8977 36481;36482 36481 LQLEAIHK 8 1 0 Unmodified _LQLEAIHK_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6;H7C318;H7C1A9 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.2915 2 476.284734 950.554916 91061.7 -0.11566 -5.5086E-05 -0.10383 -4.9454E-05 -0.21949 -0.00010454 476.28467267449 480.29168975081 38.113 0.39548 38.113 37.884 38.279 0 92 30 5 0 0 0 0.0084146 1 19913 78.728 49.579 1 0.97506 1.0792 0 45572000 27001000 18571000 23270 1938 8772 8977 36483 36483 LQLEAIHK 8 1 0 Unmodified _LQLEAIHK_ 0 0 0 Q8WUA4;Q53SY8;H0Y4Q6;H7C318;H7C1A9 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.2919 2 476.284734 950.554916 89076.38 0.22766 0.00010843 -0.11505 -5.4795E-05 0.11261 5.3636E-05 476.284544120616 480.291695900412 44.496 0.47392 44.496 44.242 44.716 0 109 32 4 0 0 0 0.034378 1 21135 49.442 27.914 1 1.3075 1.0935 0 2215300 977350 1237900 23271 1938 8772 8977 36484 36484 LQLEETDHQK 10 1 0 Unmodified _LQLEETDHQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.8131 2 620.812042 1239.60953 76484.32 0.24997 0.00015518 -0.041536 -2.5786E-05 0.20843 0.0001294 620.812388713152 624.819139326659 23.366 0.34666 23.366 23.184 23.531 0 69 16 7 0 0 0 1.7258E-12 1 9228 148.52 128.53 1 0.92976 0.98773 0 15823000 8256600 7566600 23272 1754 8773 8978 36485 36485 LQLEETDHQK 10 1 0 Unmodified _LQLEETDHQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.2103 3 414.210453 1239.60953 93204.45 -0.082266 -3.4075E-05 0.15103 6.2558E-05 0.068764 2.8483E-05 414.21053240289 416.881857584902 23.027 0.3788 23.027 22.823 23.202 0 70 15 7 0 0 0 0.0034613 2 8934 43.168 34.468 1 1.2075 1.2522 0 33377000 15494000 17883000 23273 1754 8773 8978 36486;36487 36487 LQLEETDHQK 10 1 0 Unmodified _LQLEETDHQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.8126 2 620.812042 1239.60953 77187.11 0.16373 0.00010165 0.08839 5.4874E-05 0.25212 0.00015652 620.812362705324 624.819148020753 23.027 0.38085 23.027 22.843 23.224 0 62 15 7 0 0 0 0.0024909 1 8969 68.846 57.627 1 0.85123 0.89186 0 34610000 17010000 17600000 23274 1754 8773 8978 36488 36488 LQLEETDHQK 10 1 0 Unmodified _LQLEETDHQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.819 2 620.812042 1239.60953 NaN NaN NaN -0.87376 -0.00054244 NaN NaN NaN NaN 25.459 0.2537 25.459 25.351 25.604 0 0 0 0 0.034591 1 9289 50.805 38.178 1 NaN NaN 0 889620 0 889620 23275 1754 8773 8978 36489 36489 LQLEETMPSPYGR 13 0 1 Oxidation (M) _LQLEETM(ox)PSPYGR_ LQLEETM(1)PSPYGR LQLEETM(53.57)PSPYGR 0 1 0 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.3765 2 768.871773 1535.72899 69974.59 0.63957 0.00049175 0.28035 0.00021555 0.91992 0.0007073 768.871871475805 773.876374740256 62.286 0.85529 62.286 61.733 62.588 0 200 78 5 0 0 0 0.028087 1 36364 53.569 36.095 1 0.90756 0.90215 0 16239000 9522900 6716100 23276 1679 8774 8979 36490 36490 1486 LQLELSK 7 1 0 Unmodified _LQLELSK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.7595 2 415.752736 829.490919 91896.27 0.18866 7.8435E-05 -0.48789 -0.00020284 -0.29923 -0.00012441 415.752579248768 419.759522671985 59.902 0.76543 59.902 59.529 60.295 3.8147E-06 255 64 7 0 0 0 0.024963 1 34132 89.55 1.521 1 1.2398 1.4564 0 308940000 146180000 162770000 23277 1440 8775 8980 36491 36491 LQLELSK 7 1 0 Unmodified _LQLELSK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 419.7602 2 415.752736 829.490919 NaN NaN NaN 0.022668 9.4242E-06 NaN NaN NaN NaN 68.941 0.9421 68.941 68.541 69.483 0 0 0 0 0.027791 1 36045 89.55 3.4634 1 NaN NaN 0 7931100 0 7931100 23278 1440 8775 8980 36492 36492 LQLELSK 7 1 0 Unmodified _LQLELSK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 415.7529 2 415.752736 829.490919 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.954 1 68.954 68.454 69.454 -7.6294E-06 0 0 0 0.048436 1 36090 66.799 6.0004 1 23279 1440 8775 8980 36493 36493 LQLETEIEALK 11 1 0 Unmodified _LQLETEIEALK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.871 2 643.863743 1285.71293 75598.69 1.0121 0.00065163 -0.095439 -6.145E-05 0.91662 0.00059018 643.863736998134 647.870616263605 100.95 1.4132 100.95 100.53 101.95 0 568 91 9 0 0 0 6.7214E-10 4 61875 127.4 47.491 1 1.0913 1.3004 0 667350000 312000000 355350000 + 23280 316;1155 8776 8981 36494;36495;36496;36497 36496 LQLETEIEALK 11 1 0 Unmodified _LQLETEIEALK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.871 2 643.863743 1285.71293 76032.95 0.78353 0.00050449 0.045526 2.9312E-05 0.82906 0.0005338 643.863808807209 647.870673529576 100.29 1.8715 100.29 99.173 101.04 0 636 119 9 0 0 0 2.3743E-10 3 62817 134.25 48.667 1 1.1306 1.3332 0 721170000 363460000 357710000 + 23281 316;1155 8776 8981 36498;36499;36500 36499 LQLETEIEALK 11 1 0 Unmodified _LQLETEIEALK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.8715 2 643.863743 1285.71293 76036.74 1.1382 0.00073286 -0.015925 -1.0253E-05 1.1223 0.00072261 643.863801916756 647.870747964842 113.83 0.80353 113.83 113.5 114.31 0 192 35 8 0 0 0 7.628E-10 2 66268 125.97 34.116 1 1.7421 1.4881 0 66242000 26247000 39995000 + 23282 316;1155 8776 8981 36501;36502 36502 LQLETEIEALK 11 1 0 Unmodified _LQLETEIEALK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.8713 2 643.863743 1285.71293 76055.76 0.70798 0.00045584 -0.10075 -6.4868E-05 0.60723 0.00039097 643.863685969506 647.870730244213 113.63 0.7269 113.63 113.37 114.1 -7.6294E-06 215 33 10 0 0 0 3.3058E-10 2 65229 132.78 40.34 1 1.905 1.6037 0 52340000 19667000 32673000 + 23283 316;1155 8776 8981 36503;36504 36503 LQLLEDDK 8 1 0 Unmodified _LQLLEDDK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.2618 2 487.263665 972.512776 86011 0.11241 5.4772E-05 0.042532 2.0724E-05 0.15494 7.5496E-05 487.263807311375 491.270871309348 58.136 1.5216 58.136 57.558 59.079 0 454 122 6 0 0 0 0.0070775 1 32742 84.498 13.357 1 0.63013 0.73721 0 285430000 164990000 120440000 23284 139 8777 8982 36505 36505 LQLLEDDK 8 1 0 Unmodified _LQLLEDDK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.2707 2 487.263665 972.512776 86818.74 0.23829 0.00011611 -0.14794 -7.2087E-05 0.09035 4.4024E-05 487.263705978998 491.270763481127 57.084 1.3609 57.084 56.526 57.886 0 520 105 7 0 0 0 0.0015831 2 32864 107.66 61.947 1 0.62374 0.72598 0 242150000 144760000 97390000 23285 139 8777 8982 36506;36507 36507 LQLLEDDK 8 1 0 Unmodified _LQLLEDDK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 491.2705 2 487.263665 972.512776 85007.07 0.30075 0.00014655 -0.26846 -0.00013081 0.032294 1.5735E-05 487.263283654973 491.270641790293 66.509 1.6345 66.509 65.985 67.62 0 596 106 8 0 0 0 0.0037164 2 34340 95.909 57.776 1 1.146 0.93361 0 31614000 14019000 17595000 23286 139 8777 8982 36508;36509 36508 LQLLEDDK 8 1 0 Unmodified _LQLLEDDK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.2638 2 487.263665 972.512776 85360.38 0.1861 9.0681E-05 -0.12815 -6.2442E-05 0.057955 2.8239E-05 487.263284092453 491.270662954046 66.948 1.5552 66.948 66.412 67.967 0 546 98 8 0 0 0 0.0017244 2 33861 106.36 62.227 1 1.1577 0.94026 0 24877000 11621000 13256000 23287 139 8777 8982 36510;36511 36511 LQLLSLVTK 9 1 0 Unmodified _LQLLSLVTK_ 0 0 0 A8K410;A4FTY0;A0A024RA58;O60443 A8K410 A8K410 DFNA5 Non-syndromic hearing impairment protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.8317 2 507.831517 1013.64848 88039.35 0.61259 0.00031109 0.15235 7.737E-05 0.76494 0.00038846 507.831535525279 511.838521521255 109.03 0.52006 109.03 108.78 109.3 -7.6294E-06 82 32 4 0 0 0 0.016855 2 68042 53.493 37.291 1 1.2999 1.3046 0 5113100 2523000 2590100 23288 297 8778 8983 36512;36513 36512 LQLLSLVTK 9 1 0 Unmodified _LQLLSLVTK_ 0 0 0 A8K410;A4FTY0;A0A024RA58;O60443 A8K410 A8K410 DFNA5 Non-syndromic hearing impairment protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.8385 2 507.831517 1013.64848 NaN NaN NaN -0.1679 -8.5266E-05 NaN NaN NaN NaN 108.23 0.45209 108.23 108.13 108.59 -7.6294E-06 0 0 0 0.020655 1 69229 58.37 5.888 1 NaN NaN 0 2067500 0 2067500 23289 297 8778 8983 36514 36514 LQLLSLVTK 9 1 0 Unmodified _LQLLSLVTK_ 0 0 0 A8K410;A4FTY0;A0A024RA58;O60443 A8K410 A8K410 DFNA5 Non-syndromic hearing impairment protein 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.8318 2 507.831517 1013.64848 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.22 1 108.22 107.72 108.72 0 0 0 0 0.0029978 1 69217 77.732 49.22 1 23290 297 8778 8983 36515 36515 LQLMNTFEMHIK 12 1 0 Oxidation (M) _LQLM(ox)NTFEMHIK_ LQLM(0.5)NTFEM(0.5)HIK LQLM(0)NTFEM(0)HIK 0 1 0 REV__Q8IWU5 REV__Q8IWU5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.8832 2 760.883629 1519.75271 70834.95 0.63142 0.00048044 -0.55539 -0.00042259 0.076024 5.7845E-05 760.88329506954 764.890311017054 70.336 0.80785 70.336 70.037 70.845 0 345 68 7 0 0 0 0.0059339 1 40848 45.137 45.137 2 0.74056 0.75836 0 17675000 9835400 7839400 + 23291 2181 8779 8984 36516 36516 2014;2015 LQLMNTFEMHIK 12 1 0 Oxidation (M) _LQLM(ox)NTFEMHIK_ LQLM(0.5)NTFEM(0.5)HIK LQLM(0)NTFEM(0)HIK 0 1 0 REV__Q8IWU5 REV__Q8IWU5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.8893 2 760.883629 1519.75271 70314.6 0.5467 0.00041597 -0.27077 -0.00020602 0.27593 0.00020995 760.883326397695 764.890541968299 69.306 0.89976 69.306 68.933 69.833 0 304 75 5 0 0 0 0.0027911 1 41333 50.123 30.362 2 0.71138 0.74246 0 19204000 11075000 8129400 + 23292 2181 8779 8984 36517 36517 2014;2015 LQLNGLTEALR 11 0 1 Unmodified _LQLNGLTEALR_ 0 0 0 REV__Q9C0G6 REV__Q9C0G6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.3555 2 614.356419 1226.69829 78146.77 0.55537 0.0003412 -2.1057 -0.0012936 -1.5503 -0.00095244 614.353959666364 619.861886693697 89.038 0.33717 89.038 88.763 89.101 0 71 23 5 0 0 0 0.0040724 1 53723 58.676 9.8799 1 0.97452 1.0054 0 19953000 12323000 7630000 + 23293 2185 8780 8985 36518 36518 LQLNGLTEALR 11 0 1 Unmodified _LQLNGLTEALR_ 0 0 0 REV__Q9C0G6 REV__Q9C0G6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.3559 2 614.356419 1226.69829 77226.15 0.23745 0.00014588 -0.68179 -0.00041886 -0.44434 -0.00027298 614.355750561112 619.360672034257 89.201 0.9894 89.201 88.912 89.901 0 272 82 4 0 0 0 0.012508 3 53797 47.823 10.348 1 0.91707 0.94819 0 37249000 17419000 19830000 + 23294 2185 8780 8985 36519;36520;36521 36519 LQLNGNLQLELAQVLAQERPK 21 1 1 Unmodified _LQLNGNLQLELAQVLAQERPK_ 0 0 1 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.7933 3 792.451691 2374.33324 68565.16 0.7758 0.00061479 -0.11501 -9.1141E-05 0.66079 0.00052365 792.451557409835 798.459161187187 122.19 0.50327 122.19 122.02 122.52 7.6294E-06 130 35 8 0 0 0 1.1914E-07 1 79048 61.181 61.181 1 1.2648 1.3519 0 13053000 5745300 7307800 23295 587 8781 8986 36522 36522 LQLNGNLQLELAQVLAQERPK 21 1 1 Unmodified _LQLNGNLQLELAQVLAQERPK_ 0 0 1 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.46 3 792.451691 2374.33324 69132.72 0.80665 0.00063923 -0.13605 -0.00010781 0.6706 0.00053142 792.785959064175 798.793191735076 121.58 0.52345 121.58 121.42 121.95 0 237 38 9 0 0 0 7.8043E-16 2 80507 106.03 106.03 1 1.1241 1.2785 0 18671000 8241300 10429000 23296 587 8781 8986 36523;36524 36524 LQLQGLDLSSR 11 0 1 Unmodified _LQLQGLDLSSR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.3497 2 615.346052 1228.67755 NaN NaN NaN -0.40045 -0.00024641 NaN NaN NaN NaN 102.94 0.52249 102.94 102.64 103.17 0 0 0 0 0.053284 1 58463 43.297 12.61 1 NaN NaN 0 1908800 0 1908800 23297 1581 8782 8987 36525 36525 LQLQGLDLSSR 11 0 1 Unmodified _LQLQGLDLSSR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.3499 2 615.346052 1228.67755 NaN NaN NaN -0.48362 -0.0002976 NaN NaN NaN NaN 102.75 0.49065 102.75 102.53 103.02 -7.6294E-06 0 0 0 0.025756 1 57500 51.436 9.9877 1 NaN NaN 0 1351000 0 1351000 23298 1581 8782 8987 36526 36526 LQLQNPPAIHGSGSGSCQ 18 0 0 Unmodified _LQLQNPPAIHGSGSGSCQ_ 0 0 0 Q4G1A1;A8K3X3;Q9H410;Q5JW54 Q4G1A1 Q4G1A1 DSN1 Kinetochore-associated protein DSN1 homolog ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.9451 2 925.944324 1849.87409 NaN NaN NaN 0.077158 7.1444E-05 NaN NaN NaN NaN 58.74 0.51386 58.74 58.53 59.044 0 0 0 0 0.00047529 2 33260 59.57 53.329 1 23299 727 8783 8988 36527;36528 36527 LQLQNPPAIHGSGSGSCQ 18 0 0 Unmodified _LQLQNPPAIHGSGSGSCQ_ 0 0 0 Q4G1A1;A8K3X3;Q9H410;Q5JW54 Q4G1A1 Q4G1A1 DSN1 Kinetochore-associated protein DSN1 homolog ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.4523 2 925.944324 1849.87409 NaN NaN NaN 0.18246 0.00016894 NaN NaN NaN NaN 57.738 0.43878 57.738 57.53 57.969 3.8147E-06 0 0 0 1.375E-12 3 33458 96.745 86.74 1 23300 727 8783 8988 36529;36530;36531 36531 LQLSLADFR 9 0 1 Unmodified _LQLSLADFR_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.8053 2 531.800749 1061.58694 82957.11 0.51992 0.00027649 0.10528 5.5987E-05 0.62519 0.00033248 531.800686198581 536.80475129908 105.48 0.91838 105.48 105.03 105.95 0 355 70 7 0 0 0 2.3878E-05 2 65211 114.89 71.648 1 0.87054 0.99475 0 125130000 68521000 56605000 23301 886 8784 8989 36532;36533 36533 LQLSLADFR 9 0 1 Unmodified _LQLSLADFR_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.8008 2 531.800749 1061.58694 83524.75 0.70767 0.00037634 0.22644 0.00012042 0.93411 0.00049676 531.800703538308 536.80474415922 104.72 1.0115 104.72 104.26 105.27 0 412 79 7 0 0 0 2.3878E-05 2 66223 114.89 72.025 1 0.9047 1.033 0 147480000 74636000 72846000 23302 886 8784 8989 36534;36535 36534 LQLSLADFR 9 0 1 Unmodified _LQLSLADFR_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.8052 2 531.800749 1061.58694 83439.91 0.39434 0.00020971 0.058826 3.1284E-05 0.45317 0.000241 531.800699258601 536.804773563628 117.26 0.77413 117.26 117 117.77 0 162 33 8 0 0 0 0.00033619 2 68963 101.64 58.397 1 1.0522 0.86842 0 18866000 9160500 9705200 23303 886 8784 8989 36536;36537 36536 LQLSLADFR 9 0 1 Unmodified _LQLSLADFR_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.8051 2 531.800749 1061.58694 82726.86 0.5226 0.00027792 0.15621 8.3073E-05 0.67881 0.00036099 531.800752622724 536.804824020986 117.07 0.72976 117.07 116.79 117.52 -7.6294E-06 154 32 8 0 0 0 1.3597E-05 2 67916 123.72 77.295 1 1.1465 0.99294 0 23500000 11762000 11738000 23304 886 8784 8989 36538;36539 36539 LQLTAQSQVQMK 12 1 0 Oxidation (M) _LQLTAQSQVQM(ox)K_ LQLTAQSQVQM(1)K LQLTAQSQVQM(47.84)K 0 1 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24 A0A024R570 A0A024R570 MEN1 Menin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.8784 2 695.871576 1389.7286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.025 1 42.025 41.525 42.525 3.8147E-06 0 0 0 0.012087 1 22249 47.844 29.099 1 23305 171 8785 8990 36540 36540 146 LQLWDTAGQER 11 0 1 Unmodified _LQLWDTAGQER_ 0 0 0 Q6FGX3;Q53ET8;A0A024R5J5;A0A024R5H8;P20340;B7Z5Z9;Q6AZ91;Q9NRW1;C9JB90;C9JU14;J3KR73;Q14964 Q6FGX3 Q6FGX3 RAB6A;RAB6B;RAB39A Ras-related protein Rab-6A;Ras-related protein Rab-6B;Ras-related protein Rab-39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8378 2 658.833308 1315.65206 74078.54 0.53331 0.00035136 0.22456 0.00014795 0.75787 0.00049931 658.833279865194 663.837515803742 72.199 1.0056 72.199 71.806 72.812 0 348 74 6 0 0 0 3.7938E-10 2 42062 132.01 0 1 1.4699 1.5731 0 45419000 20047000 25371000 23306 182 8786 8991 36541;36542 36542 LQLWDTAGQER 11 0 1 Unmodified _LQLWDTAGQER_ 0 0 0 Q6FGX3;Q53ET8;A0A024R5J5;A0A024R5H8;P20340;B7Z5Z9;Q6AZ91;Q9NRW1;C9JB90;C9JU14;J3KR73;Q14964 Q6FGX3 Q6FGX3 RAB6A;RAB6B;RAB39A Ras-related protein Rab-6A;Ras-related protein Rab-6B;Ras-related protein Rab-39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8377 2 658.833308 1315.65206 74136.84 0.57745 0.00038045 0.18034 0.00011882 0.7578 0.00049926 658.833409587024 663.837476573596 70.938 1.0133 70.938 70.51 71.524 0 320 76 5 0 0 0 0.00040176 2 42258 81.338 0 1 1.4984 1.74 0 59072000 21252000 37820000 23307 182 8786 8991 36543;36544 36544 LQLWDTAGQER 11 0 1 Unmodified _LQLWDTAGQER_ 0 0 0 Q6FGX3;Q53ET8;A0A024R5J5;A0A024R5H8;P20340;B7Z5Z9;Q6AZ91;Q9NRW1;C9JB90;C9JU14;J3KR73;Q14964 Q6FGX3 Q6FGX3 RAB6A;RAB6B;RAB39A Ras-related protein Rab-6A;Ras-related protein Rab-6B;Ras-related protein Rab-39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.8374 2 658.833308 1315.65206 74344.57 0.59849 0.00039431 0.073207 4.8232E-05 0.6717 0.00044254 658.833181324384 663.837424051012 82.281 0.79895 82.281 81.988 82.787 0 213 48 6 0 0 0 0.00029949 2 44681 88.495 0 1 1.064 0.88612 0 10680000 4570300 6110000 23308 182 8786 8991 36545;36546 36546 LQLWDTAGQER 11 0 1 Unmodified _LQLWDTAGQER_ 0 0 0 Q6FGX3;Q53ET8;A0A024R5J5;A0A024R5H8;P20340;B7Z5Z9;Q6AZ91;Q9NRW1;C9JB90;C9JU14;J3KR73;Q14964 Q6FGX3 Q6FGX3 RAB6A;RAB6B;RAB39A Ras-related protein Rab-6A;Ras-related protein Rab-6B;Ras-related protein Rab-39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.8381 2 658.833308 1315.65206 74875.02 0.46737 0.00030792 0.20236 0.00013332 0.66972 0.00044124 658.83323873175 663.837540814066 82.427 0.81924 82.427 82.164 82.984 0 209 48 6 0 0 0 0.0013004 2 43907 68.557 0 1 1.1631 0.95225 0 8998600 3860500 5138100 23309 182 8786 8991 36547;36548 36547 LQMEAPHIIVGTPGR 15 0 1 Oxidation (M) _LQM(ox)EAPHIIVGTPGR_ LQM(1)EAPHIIVGTPGR LQM(99.57)EAPHIIVGTPGR 0 1 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.9634 3 545.627613 1633.86101 81205.05 0.4469 0.00024384 -0.25608 -0.00013972 0.19083 0.00010412 545.627467623851 548.96366885386 62.07 1.4554 62.07 61.562 63.018 0 673 128 9 0 0 0 3.2089E-07 3 35938 99.569 99.569 1 2.6871 3.0156 0 92515000 17636000 74880000 23310 770 8787 8992 36549;36550;36551 36551 599 LQMEAPHIIVGTPGR 15 0 1 Oxidation (M) _LQM(ox)EAPHIIVGTPGR_ LQM(1)EAPHIIVGTPGR LQM(69.6)EAPHIIVGTPGR 0 1 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.4443 2 817.937782 1633.86101 NaN NaN NaN 0.34554 0.00028263 NaN NaN NaN NaN 62.379 0.26884 62.379 62.255 62.524 0 0 0 0 0.00018596 1 35765 69.602 53.224 1 NaN NaN 0 7231300 0 7231300 23311 770 8787 8992 36552 36552 599 LQMEAPHIIVGTPGR 15 0 1 Oxidation (M) _LQM(ox)EAPHIIVGTPGR_ LQM(1)EAPHIIVGTPGR LQM(70.89)EAPHIIVGTPGR 0 1 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.9435 2 817.937782 1633.86101 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.983 1 61.983 61.483 62.483 0 0 0 0 0.00071089 1 35537 70.889 45.415 1 23312 770 8787 8992 36553 36553 599 LQMEAPHIIVGTPGR 15 0 1 Oxidation (M) _LQM(ox)EAPHIIVGTPGR_ LQM(1)EAPHIIVGTPGR LQM(59.23)EAPHIIVGTPGR 0 1 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.9451 2 817.937782 1633.86101 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.147 1 62.147 61.647 62.647 0 0 0 0 0.00058228 1 35656 59.227 43.598 1 23313 770 8787 8992 36554 36554 599 LQMEAPHIIVGTPGR 15 0 1 Oxidation (M) _LQM(ox)EAPHIIVGTPGR_ LQM(1)EAPHIIVGTPGR LQM(82.01)EAPHIIVGTPGR 0 1 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.9638 3 545.627613 1633.86101 80630.85 0.47845 0.00026106 -0.47936 -0.00026155 -0.00091342 -4.9839E-07 545.627422613443 548.963489234224 61.06 1.2898 61.06 60.173 61.463 -3.8147E-06 436 104 8 0 0 0 2.7222E-05 2 35805 82.007 82.007 1 2.5301 2.9085 0 76755000 23364000 53391000 23314 770 8787 8992 36555;36556 36555 599 LQMEAPHIIVGTPGR 15 0 1 Oxidation (M) _LQM(ox)EAPHIIVGTPGR_ LQM(1)EAPHIIVGTPGR LQM(87.39)EAPHIIVGTPGR 0 1 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.9644 3 545.627613 1633.86101 NaN NaN NaN 0.12517 6.8295E-05 NaN NaN NaN NaN 60.688 0.79708 60.688 60.079 60.876 -3.8147E-06 0 0 0 3.3547E-05 1 35296 87.388 60.952 1 NaN NaN 0 46274000 0 46274000 23315 770 8787 8992 36557 36557 599 LQMEAPHIIVGTPGR 15 0 1 Oxidation (M) _LQM(ox)EAPHIIVGTPGR_ LQM(1)EAPHIIVGTPGR LQM(73.39)EAPHIIVGTPGR 0 1 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.9421 2 817.937782 1633.86101 NaN NaN NaN -0.42297 -0.00034596 NaN NaN NaN NaN 60.993 0.44661 60.993 60.838 61.285 0 0 0 0 0.00012766 1 35744 73.386 50.853 1 NaN NaN 0 14330000 0 14330000 23316 770 8787 8992 36558 36558 599 LQMEAPHIIVGTPGR 15 0 1 Oxidation (M) _LQM(ox)EAPHIIVGTPGR_ LQM(1)EAPHIIVGTPGR LQM(85.73)EAPHIIVGTPGR 0 1 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.6275 3 545.627613 1633.86101 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.498 1 60.498 59.998 60.998 -3.8147E-06 0 0 0 3.8768E-05 1 35392 85.734 66.901 1 23317 770 8787 8992 36559 36559 599 LQMEAPHIIVGTPGR 15 0 1 Unmodified _LQMEAPHIIVGTPGR_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.632 3 540.295975 1617.8661 81072.67 0.80421 0.00043451 -0.34094 -0.00018421 0.46327 0.0002503 540.295891474387 543.96615383313 95.64 0.53917 95.64 95.398 95.937 7.6294E-06 203 36 7 0 0 0 0.00035717 1 53561 48.547 48.547 1 1.4274 1.2272 0 6684500 2521100 4163300 23318 770 8787 8993 36560 36560 LQMEAPHIIVGTPGR 15 0 1 Unmodified _LQMEAPHIIVGTPGR_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.6329 3 540.295975 1617.8661 82077.02 0.48384 0.00026142 -0.20184 -0.00010905 0.282 0.00015236 540.295910852478 543.632006332836 95.371 0.52427 95.371 95.142 95.667 0 162 36 6 0 0 0 0.00013436 1 52573 57.52 57.52 1 1.5757 1.3103 0 7462800 2908300 4554500 23319 770 8787 8993 36561 36561 LQNALNEQR 9 0 1 Unmodified _LQNALNEQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.2928 2 543.288537 1084.56252 81356.54 0.36174 0.00019653 -0.44639 -0.00024252 -0.084645 -4.5987E-05 543.28803707652 548.292702689919 23.677 0.42052 23.677 23.429 23.849 -1.9073E-06 78 19 6 0 0 0 4.1289E-06 2 9520 133.58 92.553 1 0.78006 0.80253 0 25029000 14588000 10441000 23320 186;1747 8788 8994 36562;36563 36562 LQNALNEQR 9 0 1 Unmodified _LQNALNEQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.2887 2 543.288537 1084.56252 82118.52 0.40452 0.00021977 -0.40676 -0.00022099 -0.0022406 -1.2173E-06 543.288115038903 548.292778139341 23.448 0.61579 23.448 23.133 23.748 0 106 26 8 0 0 0 1.5444E-05 2 9297 122.13 98.706 1 0.85018 0.91458 0 25701000 14215000 11486000 23321 186;1747 8788 8994 36564;36565 36565 LQNALNEQR 9 0 1 Unmodified _LQNALNEQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.2891 2 543.288537 1084.56252 81058.07 0.36061 0.00019591 0.061553 3.3441E-05 0.42216 0.00022936 543.288402849123 548.292601060556 25.932 0.37774 25.932 25.761 26.139 0 72 15 7 0 0 0 0.0019984 2 9606 78.113 59.019 1 1.2843 1.0918 0 9124100 4246500 4877600 23322 186;1747 8788 8994 36566;36567 36566 LQNALNEQR 9 0 1 Unmodified _LQNALNEQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.2886 2 543.288537 1084.56252 81488.16 0.47154 0.00025618 0.12147 6.5991E-05 0.59301 0.00032217 543.288534683981 548.292677815699 25.999 0.39393 25.999 25.796 26.19 1.9073E-06 71 16 6 0 0 0 0.0002392 2 9159 105.1 88.005 1 1.4565 1.209 0 5073800 2109800 2963900 23323 186;1747 8788 8994 36568;36569 36569 LQNCGVPEGHPVR 13 0 1 Unmodified _LQNCGVPEGHPVR_ 0 0 0 A0A087WX60;Q86TC9 A0A087WX60 A0A087WX60 MYPN Myopalladin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.8696 2 731.864617 1461.71468 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.339 1 24.339 23.839 24.839 -1.9073E-06 0 0 0 0.011007 1 10086 53.567 28.792 1 23324 429 8789 8995 36570 36570 LQNELDNVSTLLEEAEK 17 1 0 Unmodified _LQNELDNVSTLLEEAEK_ 0 0 0 P35580 P35580 P35580 MYH10 Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.5013 2 972.991659 1943.96877 65235.48 0.27502 0.00026759 1.0729 0.0010439 1.3479 0.0013115 972.994418967464 977.500038096383 119 0.31277 119 118.79 119.11 0 57 19 6 0 0 0 0.0038294 1 78424 35.737 35.737 1 1.5323 1.5453 0 7760100 2235700 5524400 23325 1544 8790 8996 36571 36571 LQNIIDNQK 9 1 0 Unmodified _LQNIIDNQK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.3012 2 543.301113 1084.58767 NaN NaN NaN -0.3139 -0.00017054 NaN NaN NaN NaN 37.514 0.51007 37.514 37.225 37.735 0 0 0 0 0.0011557 1 19417 87.696 58.547 1 NaN NaN 0 13620000 13620000 0 23326 696 8791 8997 36572 36572 LQNIIDNQK 9 1 0 Unmodified _LQNIIDNQK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.3079 2 543.301113 1084.58767 82469.76 0.56826 0.00030873 -0.59935 -0.00032563 -0.03109 -1.6891E-05 543.300790288022 547.307836626443 43.248 0.65237 43.248 42.922 43.575 3.8147E-06 141 41 5 0 0 0 0.029256 2 20413 46.334 46.334 1 1.0993 0.85386 0 3434300 1676500 1757800 23327 696 8791 8997 36573;36574 36574 LQNSASATALVSR 13 0 1 Unmodified _LQNSASATALVSR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.3638 2 659.35969 1316.70483 75604.52 0.72793 0.00047997 -0.17929 -0.00011822 0.54864 0.00036175 659.359587365948 664.363574741568 47.855 0.49956 47.855 47.628 48.128 0 214 44 7 0 0 0 0.00013338 2 25960 89.805 89.805 1 0.66732 0.73906 0 62935000 36697000 26237000 23328 229 8792 8998 36575;36576 36576 LQNSASATALVSR 13 0 1 Unmodified _LQNSASATALVSR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.9652 2 659.35969 1316.70483 74607.03 0.83837 0.00055279 -0.028217 -1.8605E-05 0.81015 0.00053418 659.359762624776 664.363626267606 46.701 0.48838 46.701 46.448 46.936 3.8147E-06 200 41 7 0 0 0 0.0039016 1 25772 63.691 63.691 1 0.7103 0.82586 0 59865000 31707000 28158000 23329 229 8792 8998 36577 36577 LQNSASATALVSR 13 0 1 Unmodified _LQNSASATALVSR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.3649 2 659.35969 1316.70483 73856.79 0.65281 0.00043044 -0.058021 -3.8257E-05 0.59479 0.00039218 659.359610243696 664.363723163539 55.243 0.59243 55.243 54.97 55.562 0 224 38 8 0 0 0 0.0029363 1 27555 51.727 51.727 1 1.9282 1.6228 0 9818600 3199300 6619300 23330 229 8792 8998 36578 36578 LQNSASATALVSR 13 0 1 Unmodified _LQNSASATALVSR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.3607 2 659.35969 1316.70483 75354.09 0.52709 0.00034754 0.16436 0.00010837 0.69145 0.00045591 659.359791925279 664.363802812673 55.695 0.63052 55.695 55.4 56.03 0 189 37 8 0 0 0 0.0025247 2 27287 62.924 62.924 1 1.8585 1.5303 0 8443100 3087900 5355100 23331 229 8792 8998 36579;36580 36580 LQNVQIALDYLR 12 0 1 Unmodified _LQNVQIALDYLR_ 0 0 0 Q15149;E9PMV1;E9PKG0;E9PQ28;E9PIA2 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.4105 2 723.409183 1444.80381 73654.03 1.2369 0.00089477 -0.41975 -0.00030365 0.81713 0.00059112 723.409270800916 728.412828129425 110.57 0.36579 110.57 110.42 110.79 0 128 26 7 0 0 0 2.7248E-08 2 69468 119.22 84.503 1 1.4409 1.4739 0 35637000 16785000 18852000 23332 1754 8793 8999 36581;36582 36582 LQNVQIALDYLR 12 0 1 Unmodified _LQNVQIALDYLR_ 0 0 0 Q15149;E9PMV1;E9PKG0;E9PQ28;E9PIA2 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.4133 2 723.409183 1444.80381 72660.93 0.95378 0.00068997 -0.20711 -0.00014983 0.74667 0.00054015 723.409162376702 728.41285320699 109.94 0.33718 109.94 109.81 110.15 -7.6294E-06 96 20 7 0 0 0 7.7261E-23 2 70664 157.95 115.94 1 1.221 1.404 0 53187000 24525000 28662000 23333 1754 8793 8999 36583;36584 36584 LQNVQIALDYLR 12 0 1 Unmodified _LQNVQIALDYLR_ 0 0 0 Q15149;E9PMV1;E9PKG0;E9PQ28;E9PIA2 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.4126 2 723.409183 1444.80381 72625.45 0.92717 0.00067073 -0.065243 -4.7197E-05 0.86193 0.00062353 723.911693967853 728.412424466336 122.12 0.32539 122.12 121.95 122.28 -7.6294E-06 63 14 6 0 0 0 0.00014601 2 72743 93.096 60.572 1 3.267 2.7786 0 9090100 2356500 6733600 23334 1754 8793 8999 36585;36586 36585 LQNVQIALDYLR 12 0 1 Unmodified _LQNVQIALDYLR_ 0 0 0 Q15149;E9PMV1;E9PKG0;E9PQ28;E9PIA2 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.4135 2 723.409183 1444.80381 72175.42 0.94593 0.00068429 -0.21871 -0.00015822 0.72721 0.00052607 723.911108417321 728.412617889817 121.94 0.34399 121.94 121.76 122.1 7.6294E-06 60 14 5 0 0 0 0.00014601 1 71670 93.096 61.087 1 3.4399 2.8927 0 4815200 1353500 3461600 23335 1754 8793 8999 36587 36587 LQPFATEADVEEALR 15 0 1 Unmodified _LQPFATEADVEEALR_ 0 0 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;Q59F49 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.9324 2 844.928134 1687.84172 NaN NaN NaN -0.24067 -0.00020335 NaN NaN NaN NaN 107.26 0.55636 107.26 106.99 107.55 -7.6294E-06 0 0 0 0.0003568 1 66863 74.46 58.921 1 NaN NaN 0 13939000 0 13939000 23336 745 8794 9000 36588 36588 LQPFATEADVEEALR 15 0 1 Unmodified _LQPFATEADVEEALR_ 0 0 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;Q59F49 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.4292 2 844.928134 1687.84172 67223.9 0.95867 0.00081 -0.6322 -0.00053416 0.32646 0.00027584 844.927671723677 849.931500273833 106.68 0.54617 106.68 106.4 106.94 0 194 42 7 0 0 0 0.00021995 3 68040 65.179 60.157 1 1.3813 1.5112 0 33969000 14357000 19611000 23337 745 8794 9000 36589;36590;36591 36590 LQPFATEADVEEALR 15 0 1 Unmodified _LQPFATEADVEEALR_ 0 0 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;Q59F49 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 844.9282 2 844.928134 1687.84172 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.8 1 118.8 118.3 119.3 0 0 0 0 0.0085915 1 70232 49.448 25.105 1 23338 745 8794 9000 36592 36592 LQPFPAHASR 10 0 1 Unmodified _LQPFPAHASR_ 0 0 0 Q68DM7;B4E027;R4GNG3;F8WAK2 Q68DM7 Q68DM7 DKFZp686G01261;GIT2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.3082 2 562.30399 1122.59343 NaN NaN NaN 0.19148 0.00010767 NaN NaN NaN NaN 60.391 0.58335 60.391 60.074 60.657 0 0 0 0 0.00516 1 34392 69.825 2.6552 1 NaN NaN 0 40215000 0 40215000 23339 1059 8795 9001 36593 36593 LQPFPAHASR 10 0 1 Unmodified _LQPFPAHASR_ 0 0 0 Q68DM7;B4E027;R4GNG3;F8WAK2 Q68DM7 Q68DM7 DKFZp686G01261;GIT2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.3079 2 562.30399 1122.59343 NaN NaN NaN -0.035057 -1.9713E-05 NaN NaN NaN NaN 59.205 0.51835 59.205 58.971 59.489 0 0 0 0 0.011328 1 34414 61.962 7.8051 1 NaN NaN 0 55465000 0 55465000 23340 1059 8795 9001 36594 36594 LQPHPQLSPEIR 12 0 1 Unmodified _LQPHPQLSPEIR_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.6004 3 472.264892 1413.77285 88595.05 0.14486 6.8413E-05 0.052841 2.4955E-05 0.1977 9.3369E-05 472.26493287286 475.601013853218 51.076 0.59614 51.076 50.76 51.356 0 247 54 6 0 0 0 0.00010959 2 28189 59.227 59.227 1 1.1423 1.2527 0 53443000 29925000 23518000 23341 1724 8796 9002 36595;36596 36596 LQPHPQLSPEIR 12 0 1 Unmodified _LQPHPQLSPEIR_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.3959 2 707.8937 1413.77285 73411.16 0.37578 0.00026602 -0.030092 -2.1302E-05 0.34569 0.00024471 707.8943164286 712.897836749387 49.292 0.36987 49.292 49.104 49.474 0 150 33 7 0 0 0 0.022678 1 27683 42.802 42.802 1 1.1317 1.1374 0 11132000 4450700 6681000 23342 1724 8796 9002 36597 36597 LQPHPQLSPEIR 12 0 1 Unmodified _LQPHPQLSPEIR_ 0 0 0 Q13895 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.6007 3 472.264892 1413.77285 88292.4 0.22786 0.00010761 -0.27214 -0.00012852 -0.044279 -2.0911E-05 472.264754159607 475.60076435981 58.741 1.0178 58.741 58.373 59.391 0 279 81 7 0 0 0 0.030308 1 29253 24.922 24.922 1 1.1174 0.98804 0 3951800 1517000 2434800 23343 1724 8796 9002 36598 36598 LQPLSPVPSDIEISR 15 0 1 Unmodified _LQPLSPVPSDIEISR_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24;H0Y327 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.9625 2 825.956694 1649.89884 67516.86 0.84824 0.00070061 -0.30368 -0.00025083 0.54455 0.00044978 825.956051676567 830.960704490785 102.97 0.62477 102.97 102.74 103.36 0 188 53 6 0 0 0 0.0031781 3 63409 43.382 43.382 1 1.3581 1.4247 0 12105000 3574300 8531000 23344 418 8797 9003 36599;36600;36601 36601 LQPLSPVPSDIEISR 15 0 1 Unmodified _LQPLSPVPSDIEISR_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24;H0Y327 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.9614 2 825.956694 1649.89884 67515.07 1.1669 0.0009638 -1.0041 -0.00082931 0.16282 0.00013448 825.955759452398 830.960355867025 102.29 0.54048 102.29 102.09 102.63 0 158 42 5 0 0 0 0.0218 1 64477 22.72 22.72 1 1.1846 1.1813 0 11645000 4820700 6823800 23345 418 8797 9003 36602 36602 LQPLSPVPSDIEISR 15 0 1 Unmodified _LQPLSPVPSDIEISR_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24;H0Y327 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 826.4587 2 825.956694 1649.89884 67555.25 0.83743 0.00069168 -1.0863 -0.00089722 -0.24885 -0.00020554 826.457564553002 831.460604760142 114.74 0.41834 114.74 114.57 114.99 0 55 18 6 0 0 0 0.017855 1 66220 32.062 26.217 1 1.2502 1.0612 0 3095500 1635900 1459600 23346 418 8797 9003 36603 36603 LQPPFSPHPTLLSSTPKPPGTSEPR 25 1 1 Unmodified _LQPPFSPHPTLLSSTPKPPGTSEPR_ 0 0 1 A0A024R8V6;Q9P275;A0A075B784 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.6155 4 667.857789 2667.40205 73055.49 0.65906 0.00044016 0.23249 0.00015527 0.89155 0.00059543 668.359793790836 672.614311888392 99.053 1.1603 99.053 98.504 99.664 7.6294E-06 380 68 10 0 0 0 0.00092008 1 55856 24.637 24.637 1 1.348 1.1438 0 8672900 3892800 4780200 23347 260 8798 9004 36604 36604 LQPPFSPHPTLLSSTPKPPGTSEPR 25 1 1 Unmodified _LQPPFSPHPTLLSSTPKPPGTSEPR_ 0 0 1 A0A024R8V6;Q9P275;A0A075B784 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.8647 4 667.857789 2667.40205 74285.3 0.64218 0.00042889 0.42471 0.00028365 1.0669 0.00071253 668.10845501041 672.614288474344 98.738 0.8623 98.738 98.326 99.188 0 364 51 10 0 0 0 0.054151 1 54768 7.8991 7.8991 1 0.98912 0.83346 0 8247300 4154200 4093100 23348 260 8798 9004 36605 36605 LQQELDDLLVDLDHQR 16 0 1 Unmodified _LQQELDDLLVDLDHQR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.3394 3 650.669083 1948.98542 74558.34 1.0089 0.00065646 -0.17595 -0.00011448 0.83295 0.00054197 650.669005707257 654.005070126208 114.03 1.2237 114.03 113.68 114.9 0 526 86 10 0 0 0 4.7964E-05 2 72140 97.767 97.767 1 1.5643 1.8145 0 173150000 64219000 108930000 23349 81 8799 9005 36606;36607 36607 LQQELDDLLVDLDHQR 16 0 1 Unmodified _LQQELDDLLVDLDHQR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 975.9984 2 975.499986 1948.98542 62182.23 0.57606 0.00056195 -1.1778 -0.001149 -0.60178 -0.00058704 975.499131443511 980.504192551751 114.07 0.57446 114.07 113.75 114.32 0 149 41 6 0 0 0 0.018729 2 72232 29.341 29.341 1 2.0523 2.064 0 15882000 5571300 10310000 23350 81 8799 9005 36608;36609 36609 LQQELDDLLVDLDHQR 16 0 1 Unmodified _LQQELDDLLVDLDHQR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.0037 3 650.669083 1948.98542 74955.35 0.8102 0.00052717 -0.20832 -0.00013555 0.60188 0.00039162 651.003265312713 654.005096172974 113.38 0.99554 113.38 113.06 114.06 -7.6294E-06 468 71 10 0 0 0 8.9676E-07 3 73429 88.951 88.951 1 1.7014 1.9552 0 197150000 75479000 121670000 23351 81 8799 9005 36610;36611;36612 36611 LQQELDDLLVDLDHQR 16 0 1 Unmodified _LQQELDDLLVDLDHQR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.0038 3 650.669083 1948.98542 74465.96 0.92998 0.00060511 -0.1033 -6.7214E-05 0.82668 0.0005379 651.003341443136 654.005150988431 125.45 1.307 125.45 125.09 126.4 0 291 52 11 0 0 0 4.4657E-34 2 75268 136.01 136.01 1 2.4546 2.1178 0 80410000 23561000 56849000 23352 81 8799 9005 36613;36614 36614 LQQELDDLLVDLDHQR 16 0 1 Unmodified _LQQELDDLLVDLDHQR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.0035 3 650.669083 1948.98542 75201.38 0.8168 0.00053147 -0.13816 -8.9899E-05 0.67864 0.00044157 650.669036142608 654.005127815706 125.24 0.83562 125.24 125.01 125.85 0 234 36 10 0 0 0 4.4068E-13 2 74172 102.78 102.78 1 2.5208 2.1996 0 62560000 17589000 44971000 23353 81 8799 9005 36615;36616 36616 LQQELDDLLVDLDHQR 16 0 1 Unmodified _LQQELDDLLVDLDHQR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 980.5047 2 975.499986 1948.98542 61656.91 0.33913 0.00033082 -0.77991 -0.0007608 -0.44078 -0.00042998 975.499377852443 981.006380907062 125.24 0.48686 125.24 125.03 125.52 0 84 19 9 0 0 0 0.00023 1 74246 58.487 52.993 1 2.1948 1.8373 0 4904300 2035400 2868900 23354 81 8799 9005 36617 36617 LQQEQDLRR 9 0 2 Unmodified _LQQEQDLRR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 395.8828 3 395.882671 1184.62618 95045.3 -0.048223 -1.9091E-05 -0.14472 -5.7292E-05 -0.19294 -7.6383E-05 395.882475077151 402.55490766038 17.724 0.33406 17.724 17.535 17.869 0 47 11 8 0 0 0 5.9709E-05 1 4824 91.867 66.525 1 0.62156 0.67512 0 34150000 21629000 12520000 23355 1942 8800 9006 36618 36618 LQQEQDLRR 9 0 2 Unmodified _LQQEQDLRR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.3094 2 593.320368 1184.62618 78491.36 0.52933 0.00031406 -0.066867 -3.9673E-05 0.46247 0.00027439 593.320339959774 603.32873006886 17.731 0.19066 17.731 17.617 17.808 0 32 5 8 0 0 0 0.00081413 3 4831 107.57 56.968 1 0.78541 0.84799 0 18597000 10007000 8589900 23356 1942 8800 9006 36619;36620;36621 36620 LQQEQDLRR 9 0 2 Unmodified _LQQEQDLRR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 395.8821 3 395.882671 1184.62618 94054.6 0.0074914 2.9657E-06 -0.36699 -0.00014528 -0.3595 -0.00014232 395.882379065938 402.554840874201 17.666 0.32972 17.666 17.535 17.865 0 70 12 8 0 0 0 0.00012688 1 4550 87.308 61.265 1 0.80896 0.92494 0 45860000 26197000 19663000 23357 1942 8800 9006 36622 36622 LQQEQDLRR 9 0 2 Unmodified _LQQEQDLRR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3204 2 593.320368 1184.62618 78667.92 0.44437 0.00026365 0.1019 6.0459E-05 0.54627 0.00032411 593.320304561573 603.32887453917 17.666 0.28156 17.666 17.535 17.817 0 47 10 7 0 0 0 0.0020359 2 4569 88.37 45.771 1 0.75545 0.83697 0 23194000 12568000 10626000 23358 1942 8800 9006 36623;36624 36623 LQQEQDLRR 9 0 2 Unmodified _LQQEQDLRR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 395.8824 3 395.882671 1184.62618 93633.59 -0.2761 -0.0001093 -0.77342 -0.00030618 -1.0495 -0.00041548 395.88188631957 402.554768119472 18.866 0.29382 18.866 18.745 19.038 0 34 11 6 0 0 0 0.0046796 1 4775 46.447 20.404 1 1.5553 1.2979 0 15904000 6352800 9551000 23359 1942 8800 9006 36625 36625 LQQEQDLRR 9 0 2 Unmodified _LQQEQDLRR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.3207 2 593.320368 1184.62618 76415.97 0.10933 6.4867E-05 -0.31128 -0.00018469 -0.20195 -0.00011982 593.319426715346 603.328752470697 18.866 0.15944 18.866 18.77 18.929 0 28 5 7 0 0 0 0.03607 1 4776 49.423 17.663 1 1.6581 1.3946 0 11756000 4364100 7392400 23360 1942 8800 9006 36626 36626 LQQEQDLRR 9 0 2 Unmodified _LQQEQDLRR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 395.8827 3 395.882671 1184.62618 93655.75 -0.46958 -0.0001859 -0.33486 -0.00013257 -0.80445 -0.00031847 395.882409560884 402.55488669285 18.806 0.27273 18.806 18.695 18.967 0 50 14 7 0 0 0 0.017207 1 4264 29.473 2.8002 1 1.6552 1.5013 0 5565600 2106100 3459500 23361 1942 8800 9006 36627 36627 LQQGAGLESPQGQPEPGAASPQR 23 0 1 Unmodified _LQQGAGLESPQGQPEPGAASPQR_ 0 0 0 Q9H6F5;Q6ZW18 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1152.5739 2 1152.07237 2302.13019 57496.22 0.21641 0.00024932 0.15725 0.00018116 0.37366 0.00043048 1152.57410604604 1157.07677271258 49.33 0.40783 49.33 49.106 49.513 -3.8147E-06 123 27 7 0 0 0 2.7633E-09 2 26996 112.67 112.67 1 0.42588 0.44229 0 20806000 13633000 7172700 23362 2037 8801 9007 36628;36629 36629 LQQGAGLESPQGQPEPGAASPQR 23 0 1 Unmodified _LQQGAGLESPQGQPEPGAASPQR_ 0 0 0 Q9H6F5;Q6ZW18 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1152.0743 2 1152.07237 2302.13019 NaN NaN NaN -0.12424 -0.00014313 NaN NaN NaN NaN 48.159 0.36412 48.159 48.026 48.391 0 0 0 0 0.004252 2 26881 48.216 43.218 1 NaN NaN 0 16124000 16124000 0 23363 2037 8801 9007 36630;36631 36631 LQQGAGLESPQGQPEPGAASPQR 23 0 1 Unmodified _LQQGAGLESPQGQPEPGAASPQR_ 0 0 0 Q9H6F5;Q6ZW18 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1157.0774 2 1152.07237 2302.13019 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.158 1 48.158 47.658 48.658 -3.8147E-06 0 0 0 0.00012663 1 26902 56.514 44.154 1 23364 2037 8801 9007 36632 36632 LQQLFNHTMFILEQEEYQR 19 0 1 Oxidation (M) _LQQLFNHTM(ox)FILEQEEYQR_ LQQLFNHTM(1)FILEQEEYQR LQQLFNHTM(120.11)FILEQEEYQR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.0757 3 828.405641 2482.19509 NaN NaN NaN 0.1728 0.00014315 NaN NaN NaN NaN 101.11 1.4653 101.11 100.55 102.01 0 0 0 0 2.5817E-23 1 62225 120.11 97.988 1 NaN NaN 0 58280000 0 58280000 23365 81;1544 8802 9008 36633 36633 64 LQQLFNHTMFILEQEEYQR 19 0 1 Oxidation (M) _LQQLFNHTM(ox)FILEQEEYQR_ LQQLFNHTM(1)FILEQEEYQR LQQLFNHTM(42.72)FILEQEEYQR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.0778 3 828.405641 2482.19509 66619.38 0.83306 0.00069011 0.0097899 8.11E-06 0.84285 0.00069822 828.739564643874 832.410539149757 100.24 1.0681 100.24 99.684 100.75 0 414 85 7 0 0 0 9.3687E-05 2 63187 42.716 42.716 1 2.9153 3.348 0 78724000 28904000 49819000 23366 81;1544 8802 9008 36634;36635 36635 64 LQQLFNHTMFILEQEEYQR 19 0 1 Oxidation (M) _LQQLFNHTM(ox)FILEQEEYQR_ LQQLFNHTM(1)FILEQEEYQR LQQLFNHTM(47.4)FILEQEEYQR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 832.0766 3 828.405641 2482.19509 67125.36 1.0371 0.00085915 -0.48664 -0.00040314 0.55047 0.00045602 828.73975196227 832.075849837858 112.78 0.46783 112.78 112.56 113.02 0 133 21 10 0 0 0 3.6767E-05 1 65554 47.397 47.397 1 1.9513 1.6559 0 9240000 3406700 5833300 23367 81;1544 8802 9008 36636 36636 64 LQQLFNHTMFILEQEEYQR 19 0 1 Unmodified _LQQLFNHTMFILEQEEYQR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 826.7447 3 823.074003 2466.20018 68534.59 1.0727 0.00088293 -0.53353 -0.00043913 0.5392 0.0004438 823.408231923998 826.40984440852 122.78 0.51154 122.78 122.55 123.06 0 116 24 8 0 0 0 0.00041611 1 73262 36.111 33.188 1 2.6453 2.2434 0 5104300 1418800 3685500 23368 81;1544 8802 9009 36637 36637 LQQLGEAHQAETEVLRR 17 0 2 Unmodified _LQQLGEAHQAETEVLRR_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.522 4 495.267073 1977.03919 85356.67 0.17911 8.8705E-05 0.09616 4.7625E-05 0.27527 0.00013633 495.267218071773 500.271397706176 60.928 0.4455 60.928 60.694 61.139 -3.8147E-06 174 36 7 0 0 0 0.05631 1 31127 9.254 9.254 1 1.3561 1.168 0 5260000 2344500 2915500 23369 186;1747;718 8803 9010 36638 36638 LQQLPADFGR 10 0 1 Unmodified _LQQLPADFGR_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.8087 2 572.809105 1143.60366 NaN NaN NaN -0.056649 -3.2449E-05 NaN NaN NaN NaN 69.037 1.0007 69.037 68.631 69.632 0 0 0 0 8.46E-05 1 39904 98.033 53.586 1 NaN NaN 0 113510000 113510000 0 23370 1958 8804 9011 36639 36639 LQQLPADFGR 10 0 1 Unmodified _LQQLPADFGR_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.8137 2 572.809105 1143.60366 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.915 1 68.915 68.415 69.415 0 0 0 0 4.1017E-38 1 39975 172.23 70.589 1 23371 1958 8804 9011 36640 36640 LQQLPADFGR 10 0 1 Unmodified _LQQLPADFGR_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.8133 2 572.809105 1143.60366 79542.14 0.55343 0.00031701 -0.027 -1.5466E-05 0.52644 0.00030155 572.808993860988 577.813204000307 67.809 0.61906 67.809 67.523 68.142 0 328 53 10 0 0 0 1.136E-09 2 40082 133.13 88.258 1 0.9037 1.0373 0 187180000 95715000 91461000 23372 1958 8804 9011 36641;36642 36641 LQQLPADFGR 10 0 1 Unmodified _LQQLPADFGR_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.8096 2 572.809105 1143.60366 78361.87 0.46072 0.00026391 -0.2316 -0.00013266 0.22912 0.00013124 572.809007077309 577.813107936028 78.66 0.76994 78.66 78.301 79.071 -7.6294E-06 290 48 9 0 0 0 0.00083563 2 42174 80.455 45.63 1 0.73187 0.61654 0 28066000 17159000 10906000 23373 1958 8804 9011 36643;36644 36643 LQQLPADFGR 10 0 1 Unmodified _LQQLPADFGR_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.813 2 572.809105 1143.60366 80571.31 0.43279 0.0002479 -0.16335 -9.357E-05 0.26943 0.00015433 572.809184278612 577.813154699852 78.922 0.86277 78.922 78.413 79.276 0 294 55 9 0 0 0 0.000817 2 41496 80.755 38.231 1 0.7313 0.63792 0 27039000 15775000 11264000 23374 1958 8804 9011 36645;36646 36645 LQQNISWK 8 1 0 Unmodified _LQQNISWK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.7793 2 508.779816 1015.54508 85842.67 0.59541 0.00030293 0.069847 3.5537E-05 0.66525 0.00033847 508.780109902699 512.786468911171 47.31 0.56754 47.31 47.061 47.628 0 231 50 6 0 0 0 0.00090957 2 25585 125.81 42.013 1 0.84121 0.9238 0 53746000 28866000 24880000 23375 897 8805 9012 36647;36648 36648 LQQNISWK 8 1 0 Unmodified _LQQNISWK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.787 2 508.779816 1015.54508 85162.48 0.65486 0.00033318 0.14803 7.5313E-05 0.80289 0.00040849 508.779998440173 512.786650348346 46.204 0.46546 46.204 46.044 46.509 0 170 34 7 0 0 0 0.0010104 2 25467 116.73 41.415 1 0.81056 0.90751 0 54084000 28614000 25470000 23376 897 8805 9012 36649;36650 36650 LQQNISWK 8 1 0 Unmodified _LQQNISWK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 508.7811 2 508.779816 1015.54508 85323.3 0.48949 0.00024904 -0.0030793 -1.5667E-06 0.48641 0.00024748 508.779985760196 512.786686591248 54.542 0.68444 54.542 54.235 54.92 3.8147E-06 177 46 6 0 0 0 0.0037164 2 27164 95.909 28.333 1 1.2766 1.0223 0 8537200 3548300 4989000 23377 897 8805 9012 36651;36652 36652 LQQQAALSPTTAPAVSSVSK 20 1 0 Unmodified _LQQQAALSPTTAPAVSSVSK_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 996.5477 2 992.539111 1983.06367 62631.18 0.27354 0.0002715 -0.36114 -0.00035844 -0.087594 -8.694E-05 992.537883763938 997.047705117972 71.586 0.38767 71.586 71.378 71.766 0 130 33 5 0 0 0 1.1335E-06 3 41712 77.078 77.078 1 0.64265 0.66689 0 11342000 6163500 5178800 23378 591 8806 9013 36653;36654;36655 36653 LQQQAALSPTTAPAVSSVSK 20 1 0 Unmodified _LQQQAALSPTTAPAVSSVSK_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 992.5393 2 992.539111 1983.06367 61713.45 0.53863 0.00053461 -0.028529 -2.8317E-05 0.5101 0.0005063 993.040637384139 996.546627898274 70.55 0.37054 70.55 70.354 70.725 -7.6294E-06 121 29 6 0 0 0 3.7165E-09 2 42064 95.264 95.264 1 0.90396 0.90895 0 16033000 9259000 6773700 23379 591 8806 9013 36656;36657 36657 LQQQLTQAQETLK 13 1 0 Unmodified _LQQQLTQAQETLK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.9285 2 764.920112 1527.82567 69655.7 0.53639 0.00041029 0.24311 0.00018596 0.77949 0.00059625 764.920103235126 768.927498203263 54.07 0.42665 54.07 53.921 54.348 0 172 34 7 0 0 0 6.1381E-20 2 30323 150.04 150.04 1 0.89546 0.96705 0 34959000 16140000 18819000 23380 582 8807 9014 36658;36659 36659 LQQQLTQAQETLK 13 1 0 Unmodified _LQQQLTQAQETLK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.4226 2 764.920112 1527.82567 70088.42 0.097711 7.4741E-05 0.31639 0.00024201 0.4141 0.00031675 764.920091998753 768.927660595724 53.19 0.49004 53.19 52.96 53.45 0 196 43 6 0 0 0 3.7963E-19 2 30359 147.3 147.3 1 0.83529 0.8604 0 25178000 14388000 10790000 23381 582 8807 9014 36660;36661 36661 LQQQLTQAQETLK 13 1 0 Unmodified _LQQQLTQAQETLK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 768.9273 2 764.920112 1527.82567 69309.22 0.31377 0.00024001 0.073632 5.6323E-05 0.38741 0.00029634 764.919902733026 768.927180039293 63.641 0.51058 63.641 63.397 63.908 0 253 44 8 0 0 0 5.8651E-05 1 32685 96.015 96.015 1 0.85995 0.68631 0 9350100 5089100 4260900 23382 582 8807 9014 36662 36662 LQQQLTQAQETLK 13 1 0 Unmodified _LQQQLTQAQETLK_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;B4DY59 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 764.9209 2 764.920112 1527.82567 69088.64 0.45046 0.00034456 0.076559 5.8562E-05 0.52702 0.00040313 764.920018825989 768.927173595421 64.269 0.55847 64.269 63.988 64.546 0 260 45 8 0 0 0 2.3253E-13 2 32363 128.01 128.01 1 0.81374 0.66811 0 9289700 5110200 4179500 23383 582 8807 9014 36663;36664 36664 LQQQQRPEDAEDGAEGGGK 19 1 1 Unmodified _LQQQQRPEDAEDGAEGGGK_ 0 0 1 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.9889 3 671.647118 2011.91952 74188.3 0.74839 0.00050265 0.088847 5.9674E-05 0.83723 0.00056233 671.647270013904 677.655064118694 16.192 0.59421 16.192 15.899 16.493 0 133 32 7 0 0 0 9.5821E-09 1 3605 69.747 54.223 1 1.1001 1.2036 0 9169700 4268600 4901100 23384 1694 8808 9015 36665 36665 LQQQQRPEDAEDGAEGGGK 19 1 1 Unmodified _LQQQQRPEDAEDGAEGGGK_ 0 0 1 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.989 3 671.647118 2011.91952 73624.44 0.084009 5.6424E-05 0.36974 0.00024834 0.45375 0.00030476 671.981881583002 677.654956806429 16.17 0.72335 16.17 15.76 16.484 0 268 52 8 0 0 0 0.00024373 1 3339 36.637 36.637 1 1.0941 1.2178 0 10791000 4446600 6344200 23385 1694 8808 9015 36666 36666 LQQQQRPEDAEDGAEGGGK 19 1 1 Unmodified _LQQQQRPEDAEDGAEGGGK_ 0 0 1 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.6479 3 671.647118 2011.91952 74506.89 0.28654 0.00019246 0.61196 0.00041102 0.8985 0.00060348 671.647606654046 677.654847073221 17.468 0.2967 17.468 17.307 17.604 0 82 15 8 0 0 0 0.00027112 2 3841 32.565 31.42 1 0.63042 0.55066 0 2442500 1538800 903650 23386 1694 8808 9015 36667;36668 36667 LQQQQRPEDAEDGAEGGGK 19 1 1 Unmodified _LQQQQRPEDAEDGAEGGGK_ 0 0 1 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.6554 3 671.647118 2011.91952 74555.41 0.13337 8.9575E-05 0.68277 0.00045858 0.81613 0.00054815 671.981851467289 677.655053458163 17.671 0.24329 17.671 17.508 17.751 0 112 20 8 0 0 0 0.0035021 1 3551 20.864 17.626 1 0.61515 0.53087 0 2071400 1393700 677670 23387 1694 8808 9015 36669 36669 LQQSHPLSATQIQVK 15 1 0 Unmodified _LQQSHPLSATQIQVK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.6531 3 559.980933 1676.92097 83085.52 0.76732 0.00042969 -0.18536 -0.0001038 0.58196 0.00032589 559.980951262183 562.652345821196 48.415 0.43169 48.415 48.253 48.685 0 152 32 7 0 0 0 1.012E-05 1 26349 86.497 86.497 1 1.7031 1.7646 0 29330000 7977300 21352000 23388 523 8809 9016 36670 36670 LQQSHPLSATQIQVK 15 1 0 Unmodified _LQQSHPLSATQIQVK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.6541 3 559.980933 1676.92097 81194.93 0.67688 0.00037904 -0.08148 -4.5627E-05 0.5954 0.00033341 560.314679405523 562.652273898987 46.896 0.3624 46.896 46.713 47.075 0 159 32 7 0 0 0 1.3678E-07 2 25946 103.6 103.6 1 1.6639 1.7518 0 19793000 8496700 11296000 23389 523 8809 9016 36671;36672 36672 LQQTEAELRK 10 1 1 Unmodified _LQQTEAELRK_ 0 0 1 A0A024RCN6;P26640;A0A140T936;B4DT32 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.9018 3 405.894577 1214.6619 97140.41 -0.17284 -7.0154E-05 0.12949 5.256E-05 -0.043346 -1.7594E-05 405.894944025281 411.902019284415 20.199 0.26745 20.199 20.078 20.345 1.9073E-06 26 8 5 0 0 0 0.0095463 1 6685 30.824 22.913 1 1.3002 1.3999 0 14177000 5415300 8762000 23390 363 8810 9017 36673 36673 LQQTEAELRK 10 1 1 Unmodified _LQQTEAELRK_ 0 0 1 A0A024RCN6;P26640;A0A140T936;B4DT32 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.3381 2 608.338227 1214.6619 77972.88 0.15922 9.6863E-05 -0.055815 -3.3954E-05 0.10341 6.2908E-05 608.338349980521 617.34939471452 20.059 0.21517 20.059 19.977 20.192 0 24 7 6 0 0 0 0.011031 1 6426 53.493 29.339 1 1.2974 1.4365 0 7955800 3662200 4293600 23391 363 8810 9017 36674 36674 LQQTLEEVK 9 1 0 Unmodified _LQQTLEEVK_ 0 0 0 A0A087X0P0;Q02224;D6RBW0 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.3109 2 544.303321 1086.59209 83120.51 0.73069 0.00039772 -0.95944 -0.00052223 -0.22875 -0.00012451 544.302224498408 548.310157336899 44.639 0.45737 44.639 44.385 44.842 0 90 31 4 0 0 0 0.046824 1 20671 39.305 39.305 1 1.4343 1.2605 0 999760 391430 608320 23392 445 8811 9018 36675 36675 LQQYYIFIPSK 11 1 0 Unmodified _LQQYYIFIPSK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.3925 2 700.384645 1398.75474 73455.16 0.59215 0.00041474 0.13877 9.7195E-05 0.73093 0.00051193 700.384372354634 704.391859416607 104.14 0.86552 104.14 103.77 104.64 -7.6294E-06 432 72 8 0 0 0 2.8475E-06 2 64197 111.61 111.61 1 1.0511 1.1306 0 38633000 15698000 22934000 23393 313 8812 9019 36676;36677 36676 LQQYYIFIPSK 11 1 0 Unmodified _LQQYYIFIPSK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.3926 2 700.384645 1398.75474 72934.85 0.6161 0.00043151 0.38323 0.00026841 0.99933 0.00069992 700.384767810188 704.391979673457 103.37 0.74355 103.37 103.06 103.8 0 340 61 7 0 0 0 4.2547E-10 2 65287 131.28 131.28 1 1.0238 1.1544 0 61760000 27563000 34196000 23394 313 8812 9019 36678;36679 36678 LQQYYIFIPSK 11 1 0 Unmodified _LQQYYIFIPSK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.3923 2 700.384645 1398.75474 72464.23 1.1033 0.00077275 0.44986 0.00031507 1.5532 0.0010878 700.384857586218 704.392083043214 115.77 0.80397 115.77 115.53 116.33 7.6294E-06 181 35 8 0 0 0 0.0004486 1 68043 77.662 77.662 1 1.3279 1.0897 0 37330000 14731000 22599000 23395 313 8812 9019 36680 36680 LQQYYIFIPSK 11 1 0 Unmodified _LQQYYIFIPSK_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.8941 2 700.384645 1398.75474 72632.66 0.7434 0.00052066 0.21275 0.000149 0.95614 0.00066967 700.384677542612 704.391895222199 115.64 0.77284 115.64 115.35 116.12 -7.6294E-06 201 36 8 0 0 0 0.026417 1 67027 40.727 40.727 1 1.2594 1.0325 0 27282000 11784000 15498000 23396 313 8812 9019 36681 36681 LQRMIPK 7 1 1 Oxidation (M) _LQRM(ox)IPK_ LQRM(1)IPK LQRM(56.09)IPK 0 1 1 H7BZU7;F5H6W4;B7Z5K0 H7BZU7 H7BZU7 MARCH7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.2675 2 451.26803 900.521507 88329.73 0.11413 5.1505E-05 -0.13458 -6.0734E-05 -0.02045 -9.2283E-06 451.267972296523 460.279116647223 28.058 0.48835 28.058 27.773 28.261 0 115 25 8 0 0 0 0.04052 1 13219 56.095 17.276 1 0.63737 0.75669 0 323880000 175870000 148010000 23397 1097 8813 9020 36682 36682 838 LQSDDILPLGK 11 1 0 Unmodified _LQSDDILPLGK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.8449 2 599.837528 1197.6605 78485.7 0.64807 0.00038873 0.2059 0.00012351 0.85397 0.00051224 599.837466573025 603.844919759422 88.716 0.77475 88.716 88.198 88.973 0 211 58 6 0 0 0 0.037773 1 53248 36.381 16.595 1 1.1797 1.158 0 22974000 9280400 13693000 23398 122 8814 9021 36683 36683 LQSDDILPLGK 11 1 0 Unmodified _LQSDDILPLGK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8375 2 599.837528 1197.6605 77579.67 0.88691 0.000532 0.40592 0.00024349 1.2928 0.00077549 599.837500748252 603.844937897501 87.755 0.54342 87.755 87.36 87.904 0 172 40 7 0 0 0 0.0030512 2 53979 60.518 35.803 1 1.2742 1.4348 0 69709000 30280000 39429000 23399 122 8814 9021 36684;36685 36685 LQSDDILPLGK 11 1 0 Unmodified _LQSDDILPLGK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.8453 2 599.837528 1197.6605 79347.91 0.37721 0.00022626 0.24171 0.00014499 0.61892 0.00037125 599.837512129514 603.844850050996 100.89 0.60808 100.89 100.64 101.25 0 165 40 6 0 0 0 0.030293 1 57159 38.75 28.227 1 1.3747 1.0758 0 3854500 1562200 2292400 23400 122 8814 9021 36686 36686 LQSDDILPLGK 11 1 0 Unmodified _LQSDDILPLGK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.8447 2 599.837528 1197.6605 79572.8 0.50488 0.00030285 0.062569 3.7531E-05 0.56745 0.00034038 599.837279379966 603.84464589899 100.76 0.57375 100.76 100.49 101.07 0 147 42 4 0 0 0 0.041213 1 56216 35.908 25.385 1 1.5115 1.2284 0 4479900 1998900 2481000 23401 122 8814 9021 36687 36687 LQSDFAALLTGPLQR 15 0 1 Unmodified _LQSDFAALLTGPLQR_ 0 0 0 Q9BU64 Q9BU64 Q9BU64 CENPO Centromere protein O MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.4545 2 815.451579 1628.88861 68011.38 1.0421 0.00084978 1.0003 0.00081567 2.0424 0.0016655 815.954491615954 820.455561688598 121.84 0.40826 121.84 121.59 122 7.6294E-06 116 26 6 0 0 0 0.00022096 1 78792 80.469 80.469 1 0.99145 1.0365 0 13103000 7612700 5489800 23402 2003 8815 9022 36688 36688 LQSDFAALLTGPLQR 15 0 1 Unmodified _LQSDFAALLTGPLQR_ 0 0 0 Q9BU64 Q9BU64 Q9BU64 CENPO Centromere protein O MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.4559 2 815.451579 1628.88861 68169.49 1.2467 0.0010166 0.783 0.0006385 2.0297 0.0016551 815.453161204999 820.957072110974 121.33 0.40158 121.33 121.09 121.49 7.6294E-06 135 26 8 0 0 0 1.0093E-05 3 80257 92.925 92.925 1 0.90728 0.89774 0 12392000 7009700 5382700 23403 2003 8815 9022 36689;36690;36691 36689 LQSDFAALLTGPLQR 15 0 1 Unmodified _LQSDFAALLTGPLQR_ 0 0 0 Q9BU64 Q9BU64 Q9BU64 CENPO Centromere protein O MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.9587 2 815.451579 1628.88861 67575.79 1.2477 0.0010175 0.24225 0.00019754 1.49 0.001215 815.953824857199 820.455664905431 134.22 0.28477 134.22 134.08 134.37 0 49 13 6 0 0 0 0.00025627 2 81845 61.375 61.375 1 1.1887 1.0128 0 8968500 3778700 5189700 23404 2003 8815 9022 36692;36693 36692 LQSDFAALLTGPLQR 15 0 1 Unmodified _LQSDFAALLTGPLQR_ 0 0 0 Q9BU64 Q9BU64 Q9BU64 CENPO Centromere protein O MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.4563 2 815.451579 1628.88861 68954.38 1.301 0.0010609 0.12816 0.00010451 1.4291 0.0011654 815.451980801943 820.455503353655 134.06 0.39844 134.06 133.82 134.22 0 93 20 8 0 0 0 0.00022484 3 80828 71.241 66.498 1 1.4519 1.2073 0 7474900 3517600 3957300 23405 2003 8815 9022 36694;36695;36696 36695 LQSFEDLASISTYGFR 16 0 1 Unmodified _LQSFEDLASISTYGFR_ 0 0 0 H0Y818;Q5GJ64;Q53GX1;B2R6K0;P40692 H0Y818 H0Y818 MLH1 DNA mismatch repair protein Mlh1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 917.4551 2 917.454516 1832.89448 NaN NaN NaN 0.86589 0.00079441 NaN NaN NaN NaN 119.61 0.30806 119.61 119.54 119.85 -7.6294E-06 0 0 0 0.00028006 1 78952 84.289 68.036 1 NaN NaN 0 4573500 4573500 0 23406 843 8816 9023 36697 36697 LQSGICHLFR 10 0 1 Unmodified _LQSGICHLFR_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;C9J7S3;C9JLC1 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.8847 3 410.885247 1229.63391 99476.45 0.067799 2.7858E-05 -0.98162 -0.00040333 -0.91382 -0.00037548 410.885054981792 414.220531802749 62.526 0.31792 62.526 62.405 62.723 0 61 28 4 0 0 0 0.023569 1 36682 26.673 18.448 1 1.2769 1.3108 0 4970500 1618700 3351900 23407 610 8817 9024 36698 36698 LQSLEVGTDWDPK 13 1 0 Unmodified _LQSLEVGTDWDPK_ 0 0 0 Q9H1B5 Q9H1B5 Q9H1B5 XYLT2 Xylosyltransferase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.3795 2 744.372463 1486.73037 72697.39 0.62068 0.00046202 -0.050109 -3.7299E-05 0.57057 0.00042472 744.372386895943 748.379484810573 62.174 0.56551 62.174 61.913 62.479 0 222 46 6 0 0 0 0.043947 1 31882 30.564 30.564 1 1.7836 1.4145 0 4603700 1388200 3215500 23408 2025 8818 9025 36699 36699 LQSLEVGTDWDPK 13 1 0 Unmodified _LQSLEVGTDWDPK_ 0 0 0 Q9H1B5 Q9H1B5 Q9H1B5 XYLT2 Xylosyltransferase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.3793 2 744.372463 1486.73037 72215.22 0.3913 0.00029127 0.30351 0.00022593 0.69481 0.0005172 744.372528595941 748.3797338929 62.778 0.48563 62.778 62.549 63.034 0 143 35 6 0 0 0 0.005822 1 31636 46.891 46.891 1 1.8681 1.5235 0 4649100 1755800 2893300 23409 2025 8818 9025 36700 36700 LQSLTENLTK 10 1 0 Unmodified _LQSLTENLTK_ 0 0 0 P15924 P15924 P15924 DSP Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.8218 2 573.821878 1145.6292 81567.32 0.67056 0.00038478 0.35519 0.00020382 1.0258 0.0005886 573.821883580635 577.829517578347 56.856 0.48586 56.856 56.621 57.106 0 148 45 5 0 0 0 0.014443 1 32060 49.06 29.804 1 0.3279 0.33726 0 10725000 7418200 3306500 23410 1486 8819 9026 36701 36701 LQSNPSLEGVSHVIVDEVHER 21 0 1 Unmodified _LQSNPSLEGVSHVIVDEVHER_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.8063 4 586.802748 2343.18189 80628.44 0.80973 0.00047515 -0.3228 -0.00018942 0.48692 0.00028573 587.053340147432 589.55525688728 93.368 0.473 93.368 93.04 93.513 0 144 38 7 0 0 0 0.010169 1 56591 24.227 24.227 1 1.4275 1.4516 0 27515000 10573000 16942000 23411 122 8820 9027 36702 36702 LQSSIQDLCVTWWEK 15 1 0 Unmodified _LQSSIQDLCVTWWEK_ 0 0 0 Q86XI2;B3KRQ2;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 950.9682 2 946.964194 1891.91383 67849.79 0.60625 0.0005741 -1.5693 -0.0014861 -0.96309 -0.00091201 946.964018181141 951.469682667172 116.05 0.1497 116.05 115.95 116.1 0 23 7 4 0 0 0 0.011823 1 74011 34.386 28.352 1 1.9146 1.9584 0 4350600 1610000 2740600 23412 1887 8821 9028 36703 36703 LQSSQEPEAPPPR 13 0 1 Unmodified _LQSSQEPEAPPPR_ 0 0 0 Q5H909;A0A024R9Y7;Q9UNF1;Q5H907;B4DX55;B4DWM5 Q5H909 Q5H909 MAGED2 Melanoma-associated antigen D2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.3621 2 718.36243 1434.71031 NaN NaN NaN -1.8173 -0.0013055 NaN NaN NaN NaN 26.083 0.40201 26.083 25.923 26.325 0 0 0 0 0.0017464 1 11546 73.781 52.911 1 NaN NaN 0 7864900 0 7864900 23413 292 8822 9029 36704 36704 LQSSQEPEAPPPR 13 0 1 Unmodified _LQSSQEPEAPPPR_ 0 0 0 Q5H909;A0A024R9Y7;Q9UNF1;Q5H907;B4DX55;B4DWM5 Q5H909 Q5H909 MAGED2 Melanoma-associated antigen D2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.3669 2 718.36243 1434.71031 NaN NaN NaN -0.91046 -0.00065404 NaN NaN NaN NaN 25.838 0.60064 25.838 25.441 26.042 0 0 0 0 9.2533E-05 1 11310 91.549 63.807 1 NaN NaN 0 9856000 0 9856000 23414 292 8822 9029 36705 36705 LQSVEYVVFDEADR 14 0 1 Unmodified _LQSVEYVVFDEADR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 840.4124 2 835.407034 1668.79952 65785.34 0.76743 0.00064112 0.59885 0.00050028 1.3663 0.0011414 835.909984356138 840.411023247288 100.51 0.68918 100.51 100.15 100.84 7.6294E-06 204 54 5 0 0 0 0.0041812 1 61669 45.891 45.891 1 0.88979 0.9145 0 19506000 10439000 9066200 23415 1933 8823 9030 36706 36706 LQSVEYVVFDEADR 14 0 1 Unmodified _LQSVEYVVFDEADR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.9127 2 835.407034 1668.79952 66652.37 0.78532 0.00065606 0.71364 0.00059618 1.499 0.0012522 835.407548758264 840.411115636036 99.815 0.62123 99.815 99.487 100.11 -7.6294E-06 218 47 7 0 0 0 0.00013865 2 62699 78.692 78.692 1 0.8499 0.852 0 18030000 10103000 7926700 23416 1933 8823 9030 36707;36708 36707 LQTFLSK 7 1 0 Unmodified _LQTFLSK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BU55 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.7475 2 418.747453 835.480354 94288.66 0.22523 9.4313E-05 0.46739 0.00019572 0.69261 0.00029003 418.747359290812 422.754994701245 53.674 0.38013 53.674 53.475 53.855 0 80 28 4 0 0 0 0.02668 1 30025 75.972 18.638 1 0.82991 0.89732 0 35571000 21197000 14374000 23417 1699 8824 9031 36709 36709 LQTFLSK 7 1 0 Unmodified _LQTFLSK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BU55 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.7473 2 418.747453 835.480354 93603.23 0.26591 0.00011135 0.45629 0.00019107 0.7222 0.00030242 418.747259552637 422.755069307874 52.244 0.51342 52.244 52.055 52.569 0 122 38 6 0 0 0 0.027012 1 29771 85.272 27.937 1 0.75991 0.837 0 43109000 23768000 19341000 23418 1699 8824 9031 36710 36710 LQTLAVLLR 9 0 1 Unmodified _LQTLAVLLR_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.8372 2 513.837134 1025.65972 88594.57 0.64713 0.00033252 0.12608 6.4786E-05 0.77321 0.0003973 513.837033456829 518.841409348505 104.71 0.51814 104.71 104.41 104.93 0 97 39 4 0 0 0 0.0056953 1 66344 66.073 37.855 1 0.61201 0.61393 0 9189700 5284800 3905000 23419 476 8825 9032 36711 36711 LQTLAVLLR 9 0 1 Unmodified _LQTLAVLLR_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.8414 2 513.837134 1025.65972 86755.22 0.46758 0.00024026 -0.032287 -1.659E-05 0.43529 0.00022367 513.836923678661 518.841210273881 117.44 0.35632 117.44 117.27 117.63 -7.6294E-06 52 16 4 0 0 0 0.055495 1 69150 36.557 4.6224 1 1.2831 1.1381 0 1314400 465560 848800 23420 476 8825 9032 36712 36712 LQTLAVLLR 9 0 1 Unmodified _LQTLAVLLR_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.842 2 513.837134 1025.65972 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.15 1 117.15 116.65 117.65 0 0 0 0 0.013328 1 68066 60.436 25.141 1 23421 476 8825 9032 36713 36713 LQTLVSEQPNK 11 1 0 Unmodified _LQTLVSEQPNK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.8538 2 628.845884 1255.67722 77641.02 0.62312 0.00039185 -0.11583 -7.2839E-05 0.50729 0.00031901 628.84611724844 632.852922644645 42.491 0.2379 42.491 42.379 42.617 0 55 18 4 0 0 0 0.00037232 1 22592 83.647 60.866 1 0.65024 0.6873 0 15588000 8866000 6721600 23422 197 8826 9033 36714 36714 LQTLVSEQPNK 11 1 0 Unmodified _LQTLVSEQPNK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.8463 2 628.845884 1255.67722 76804.8 0.38841 0.00024425 0.15076 9.4803E-05 0.53917 0.00033905 628.845868209366 632.8530010118 49.087 0.47575 49.087 48.811 49.286 0 131 37 5 0 0 0 0.021359 2 23879 43.308 32.478 1 0.42149 0.34435 0 2629600 1757800 871780 23423 197 8826 9033 36715;36716 36715 LQTLVSEQPNK 11 1 0 Unmodified _LQTLVSEQPNK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.8522 2 628.845884 1255.67722 76582.7 0.2934 0.0001845 -0.025976 -1.6335E-05 0.26742 0.00016817 628.845817675821 632.85286543895 49.352 0.49202 49.352 49.111 49.603 -3.8147E-06 133 37 5 0 0 0 0.0074524 2 23518 52.579 41.749 1 0.44564 0.35379 0 3133100 2074200 1058900 23424 197 8826 9033 36717;36718 36718 LQTPNTFPK 9 1 0 Unmodified _LQTPNTFPK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.2877 2 523.287474 1044.5604 81740.83 0.44634 0.00023356 0.055686 2.914E-05 0.50202 0.0002627 523.28777192633 527.294298414502 51.189 0.64943 51.189 50.794 51.443 0 228 60 7 0 0 0 0.00038357 2 28265 100.02 100.02 1 0.95752 1.0517 0 53828000 24272000 29556000 23425 468 8827 9034 36719;36720 36719 LQTPNTFPK 9 1 0 Unmodified _LQTPNTFPK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.2961 2 523.287474 1044.5604 81341.56 0.5818 0.00030445 -0.19314 -0.00010107 0.38867 0.00020338 523.287278085292 527.294253240513 50.041 0.73349 50.041 49.601 50.335 -3.8147E-06 257 64 6 0 0 0 0.00043445 2 28137 99.305 99.305 1 1.1715 1.3078 0 52651000 23397000 29255000 23426 468 8827 9034 36721;36722 36721 LQTPNTFPK 9 1 0 Unmodified _LQTPNTFPK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.2878 2 523.287474 1044.5604 83366.15 0.15147 7.9263E-05 0.68136 0.00035655 0.83283 0.00043581 523.287724768719 527.294638464188 59.032 0.54221 59.032 58.739 59.282 0 226 44 9 0 0 0 0.0060214 1 30026 65.246 47.261 1 0.92624 0.74309 0 8160800 4084800 4076000 23427 468 8827 9034 36723 36723 LQTPNTFPK 9 1 0 Unmodified _LQTPNTFPK_ 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.2946 2 523.287474 1044.5604 85224.84 0.25652 0.00013423 0.73895 0.00038668 0.99547 0.00052092 523.287783768818 527.294751422675 59.455 0.6195 59.455 59.153 59.772 -3.8147E-06 241 50 6 0 0 0 0.035665 2 29605 43.769 41.448 1 0.9075 0.7383 0 7055700 3419400 3636300 23428 468 8827 9034 36724;36725 36724 LQTPQSPLVR 10 0 1 Unmodified _LQTPQSPLVR_ 0 0 0 Q9H6S8;Q6DKI9;Q9BSR4;B7Z1W6;Q9H9Y6;Q4QRK8 Q9H6S8 Q9H6S8 POLR1B DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.837 2 569.83258 1137.65061 NaN NaN NaN 0.12818 7.3043E-05 NaN NaN NaN NaN 58.256 0.15789 58.256 58.142 58.3 3.8147E-06 0 0 0 0.015301 1 33834 57.859 21.525 1 NaN NaN 0 5990400 0 5990400 23429 1085 8828 9035 36726 36726 LQTQASATVAIPK 13 1 0 Unmodified _LQTQASATVAIPK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H0Y394;C9J5E5;C9JIZ1;H7C0A4;C9JZI8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3904 2 664.382634 1326.75072 77361.44 0.63016 0.00041867 0.52696 0.00035011 1.1571 0.00076878 664.382867032353 668.390052164659 61.112 0.72216 61.112 60.815 61.538 0 142 52 4 0 0 0 0.0041837 1 34891 48.741 34.336 1 1.6879 1.7222 0 13202000 5416200 7786200 23430 154 8829 9036 36727 36727 LQTQASATVAIPK 13 1 0 Unmodified _LQTQASATVAIPK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H0Y394;C9J5E5;C9JIZ1;H7C0A4;C9JZI8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3839 2 664.382634 1326.75072 76306.26 0.28242 0.00018763 0.71214 0.00047313 0.99455 0.00066076 664.383207416398 668.390172036674 60.23 0.55098 60.23 59.804 60.355 -3.8147E-06 129 36 6 0 0 0 0.00013556 1 35134 73.632 51.395 1 1.8452 1.9439 0 23806000 10781000 13025000 23431 154 8829 9036 36728 36728 LQTQASATVAIPK 13 1 0 Unmodified _LQTQASATVAIPK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H0Y394;C9J5E5;C9JIZ1;H7C0A4;C9JZI8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.3823 2 664.382634 1326.75072 77805.02 0.3005 0.00019965 -0.052646 -3.4977E-05 0.24786 0.00016467 664.382852654337 668.389182312904 71.099 0.52702 71.099 70.819 71.346 0 147 33 6 0 0 0 0.052504 1 37436 28.708 20.783 1 1.3186 1.0856 0 2378400 967250 1411200 23432 154 8829 9036 36729 36729 LQTQVFK 7 1 0 Unmodified _LQTQVFK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.2529 2 432.252903 862.491253 91054.16 0.20016 8.652E-05 0.076137 3.291E-05 0.2763 0.00011943 432.252870579176 436.259963468599 41.654 0.86974 41.654 41.397 42.267 0 318 69 8 0 0 0 0.011663 2 21899 107.74 42.482 1 0.87848 1.0395 0 425880000 223700000 202180000 23433 157 8830 9037 36730;36731 36731 LQTQVFK 7 1 0 Unmodified _LQTQVFK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 432.2533 2 432.252903 862.491253 91917.88 -0.15386 -6.6505E-05 0.12517 5.4103E-05 -0.028691 -1.2402E-05 432.253051794616 436.259911156485 40.513 0.49445 40.513 40.319 40.813 0 193 38 7 0 0 0 0.013268 2 21569 103.29 43.645 1 0.9726 1.1483 0 1032500000 542790000 489670000 23434 157 8830 9037 36732;36733 36732 LQTQVFK 7 1 0 Unmodified _LQTQVFK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 432.2527 2 432.252903 862.491253 89952.73 -0.37805 -0.00016341 0.27626 0.00011941 -0.10179 -4.3999E-05 432.252951938652 436.260041157788 47.276 0.70904 47.276 47.053 47.762 0 298 52 8 0 0 0 0.034211 2 22812 62.714 18.103 1 0.83879 0.70491 0 53638000 28094000 25544000 23435 157 8830 9037 36734;36735 36734 LQTQVFK 7 1 0 Unmodified _LQTQVFK_ 0 0 0 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 436.26 2 432.252903 862.491253 91788.58 -0.4959 -0.00021435 0.38777 0.00016761 -0.10813 -4.6741E-05 432.252972929758 436.260076509535 47.257 0.64276 47.257 47.034 47.677 0 288 49 8 0 0 0 0.024839 2 22318 89.673 43.303 1 0.85728 0.72488 0 58431000 30127000 28304000 23436 157 8830 9037 36736;36737 36737 LQTSEAALSSSQAEVASLR 19 0 1 Unmodified _LQTSEAALSSSQAEVASLR_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.506 2 974.502726 1946.9909 61872.89 0.20151 0.00019637 0.92596 0.00090235 1.1275 0.0010987 975.005318809863 979.507324608028 81.64 0.33453 81.64 81.512 81.847 0 97 29 5 0 0 0 7.3924E-07 1 48634 86.467 86.467 1 0.72314 0.75618 0 13041000 6723500 6317400 23437 371 8831 9038 36738 36738 LQTSEAALSSSQAEVASLR 19 0 1 Unmodified _LQTSEAALSSSQAEVASLR_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 980.0099 2 974.502726 1946.9909 63036.47 0.44316 0.00043186 1.0378 0.0010113 1.4809 0.0014432 975.005294668721 979.50740128017 80.797 0.39857 80.797 80.591 80.99 7.6294E-06 128 31 6 0 0 0 1.1962E-39 2 49255 155.28 132.8 1 0.87668 0.87888 0 18001000 9659100 8342100 23438 371 8831 9038 36739;36740 36740 LQTSEAALSSSQAEVASLR 19 0 1 Unmodified _LQTSEAALSSSQAEVASLR_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 979.5084 2 974.502726 1946.9909 62287.11 0.26249 0.0002558 0.58315 0.00056828 0.84564 0.00082408 975.005186439434 980.008924734368 94.384 0.46774 94.384 94.113 94.581 7.6294E-06 87 28 5 0 0 0 4.0965E-05 1 51925 50.155 50.155 1 1.914 1.6881 0 3653900 937750 2716100 23439 371 8831 9038 36741 36741 LQTSLTCNSMVLFDHVGCLK 20 1 0 Oxidation (M) _LQTSLTCNSM(ox)VLFDHVGCLK_ LQTSLTCNSM(1)VLFDHVGCLK LQTSLTCNSM(102.37)VLFDHVGCLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.7132 3 780.377929 2338.11196 68156.52 0.87975 0.00068653 -0.42037 -0.00032805 0.45937 0.00035848 780.712287998703 783.383461560429 100.97 1.013 100.97 100.63 101.64 0 589 75 11 0 0 0 2.7417E-13 2 61925 102.37 102.37 1 0.8352 0.94635 0 98134000 57496000 40638000 23440 1471 8832 9039 36742;36743 36743 1204 LQTSLTCNSMVLFDHVGCLK 20 1 0 Oxidation (M) _LQTSLTCNSM(ox)VLFDHVGCLK_ LQTSLTCNSM(1)VLFDHVGCLK LQTSLTCNSM(99.06)VLFDHVGCLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.3792 3 780.377929 2338.11196 67449.73 0.73673 0.00057493 -0.24578 -0.0001918 0.49096 0.00038313 780.712234724991 783.383552037222 100.29 1.0389 100.29 99.807 100.85 0 614 84 10 0 0 0 1.9636E-10 2 62765 99.059 99.059 1 0.86805 0.98645 0 143740000 92275000 51461000 23441 1471 8832 9039 36744;36745 36745 1204 LQTSLTCNSMVLFDHVGCLK 20 1 0 Oxidation (M) _LQTSLTCNSM(ox)VLFDHVGCLK_ LQTSLTCNSM(1)VLFDHVGCLK LQTSLTCNSM(99.51)VLFDHVGCLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.7142 3 780.377929 2338.11196 67059.04 1.0492 0.00081873 -0.20669 -0.0001613 0.84246 0.00065744 780.712748512517 783.383537049103 113.2 0.82878 113.2 112.83 113.66 7.6294E-06 341 39 12 0 0 0 1.0824E-10 2 65850 99.508 99.508 1 0.91457 0.78188 0 68592000 36490000 32102000 23442 1471 8832 9039 36746;36747 36747 1204 LQTSLTCNSMVLFDHVGCLK 20 1 0 Oxidation (M) _LQTSLTCNSM(ox)VLFDHVGCLK_ LQTSLTCNSM(1)VLFDHVGCLK LQTSLTCNSM(42.64)VLFDHVGCLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.3863 3 780.377929 2338.11196 68976.59 0.88404 0.00068988 0.14681 0.00011457 1.0308 0.00080445 780.712645558735 783.383737232923 121.05 0.44865 121.05 120.83 121.28 0 77 20 6 0 0 0 3.0539E-05 1 71988 42.64 42.64 1 1.3797 1.1058 0 7425000 3421100 4003900 23443 1471 8832 9039 36748 36748 1204 LQTSLTCNSMVLFDHVGCLK 20 1 0 Oxidation (M) _LQTSLTCNSM(ox)VLFDHVGCLK_ LQTSLTCNSM(1)VLFDHVGCLK LQTSLTCNSM(66.32)VLFDHVGCLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.7138 3 780.377929 2338.11196 66847.38 0.68245 0.00053257 -0.10832 -8.4529E-05 0.57413 0.00044804 780.712477714465 783.383829206475 113.02 0.76783 113.02 112.73 113.5 0 333 36 12 0 0 0 6.4246E-07 1 64808 66.325 66.325 1 0.97317 0.81789 0 50250000 25923000 24327000 23444 1471 8832 9039 36749 36749 1204 LQTSLTCNSMVLFDHVGCLK 20 1 0 Oxidation (M) _LQTSLTCNSM(ox)VLFDHVGCLK_ LQTSLTCNSM(1)VLFDHVGCLK LQTSLTCNSM(62.36)VLFDHVGCLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.0499 3 780.377929 2338.11196 NaN NaN NaN -0.26234 -0.00020472 NaN NaN NaN NaN 120.77 0.3751 120.77 120.63 121.01 0 0 0 0 4.6702E-05 1 70882 62.362 47.273 1 NaN NaN 0 2774700 0 2774700 23445 1471 8832 9039 36750 36750 1204 LQTSLTCNSMVLFDHVGCLK 20 1 0 Unmodified _LQTSLTCNSMVLFDHVGCLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.0528 3 775.046291 2322.11704 67625.89 0.94927 0.00073573 -0.030316 -2.3497E-05 0.91895 0.00071223 775.380742884475 778.052284624814 121.04 0.60449 121.04 120.8 121.4 -7.6294E-06 176 27 10 0 0 0 9.7655E-14 1 71906 109.66 109.66 1 1.5059 1.2348 0 36656000 14970000 21686000 23446 1471 8832 9040 36751 36751 LQTSLTCNSMVLFDHVGCLK 20 1 0 Unmodified _LQTSLTCNSMVLFDHVGCLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 778.0526 3 775.046291 2322.11704 67850.8 0.87819 0.00068064 -0.54109 -0.00041937 0.3371 0.00026127 775.38045446512 778.052035405515 120.78 0.50839 120.78 120.55 121.05 -7.6294E-06 183 23 11 0 0 0 1.6484E-07 3 70816 82.586 82.586 1 1.4642 1.172 0 21100000 7991000 13109000 23447 1471 8832 9040 36752;36753;36754 36753 LQTSSVLVSGLR 12 0 1 Unmodified _LQTSSVLVSGLR_ 0 0 0 A0A024R1A3;P22314;Q5JRS1;Q5JRS3;Q5JRS2;Q5JRR9;Q5JRS0 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3739 2 630.369527 1258.7245 78491.34 0.77143 0.00048629 -0.11801 -7.4389E-05 0.65343 0.0004119 630.369652581736 635.37344481895 82.154 0.49306 82.154 81.919 82.412 7.6294E-06 122 42 4 0 0 0 0.0057331 1 48988 50.194 50.194 1 1.8422 1.8669 0 9781200 3366000 6415100 23448 74 8833 9041 36755 36755 LQTSSVLVSGLR 12 0 1 Unmodified _LQTSSVLVSGLR_ 0 0 0 A0A024R1A3;P22314;Q5JRS1;Q5JRS3;Q5JRS2;Q5JRR9;Q5JRS0 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3742 2 630.369527 1258.7245 77317.31 0.85508 0.00053901 -0.39343 -0.00024801 0.46165 0.00029101 630.369384936713 635.373423523145 81.1 0.54646 81.1 80.803 81.349 0 143 46 5 0 0 0 0.00090263 1 49437 64.103 64.103 1 2.1391 2.1014 0 14201000 5055900 9145000 23449 74 8833 9041 36756 36756 LQVDALIDTIK 11 1 0 Unmodified _LQVDALIDTIK_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614;B4DYM1;B4E0T8 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.8681 2 614.861003 1227.70745 83414.26 0.39167 0.00024082 0.21591 0.00013275 0.60758 0.00037358 614.861292251668 618.868172019328 110.7 0.25227 110.7 110.55 110.8 0 45 18 4 0 0 0 0.0078138 1 71276 51.927 51.927 1 1.8204 1.9224 0 4257000 1738300 2518800 23450 12 8834 9042 36757 36757 LQVEELLK 8 1 0 Unmodified _LQVEELLK_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.2928 2 486.292225 970.569897 86265.58 0.32865 0.00015982 -0.37676 -0.00018322 -0.048116 -2.3398E-05 486.29206942784 490.298878516298 87.029 0.54969 87.029 86.876 87.425 0 122 45 8 0 0 0 0.00029372 2 52533 134.3 25.453 1 1.4822 1.7022 0 199810000 90681000 109130000 23451 2038 8835 9043 36758;36759 36759 LQVEELLK 8 1 0 Unmodified _LQVEELLK_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2994 2 486.292225 970.569897 87108.59 0.59005 0.00028693 -0.6759 -0.00032868 -0.085849 -4.1748E-05 486.291711971929 490.298703676772 85.889 0.52527 85.889 85.722 86.247 0 121 41 8 0 0 0 0.0010332 2 52891 113.7 20.503 1 1.5917 1.8142 0 150840000 65080000 85761000 23452 2038 8835 9043 36760;36761 36760 LQVEELLK 8 1 0 Unmodified _LQVEELLK_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2605 2 486.292225 970.569897 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.704 1 86.704 86.204 87.204 0 0 0 0 0.0046382 1 53444 89.142 19.144 1 23453 2038 8835 9043 36762 36762 LQVEELLK 8 1 0 Unmodified _LQVEELLK_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2977 2 486.292225 970.569897 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.722 1 86.722 86.222 87.222 0 0 0 0 0.0046382 1 53455 89.142 19.144 1 23454 2038 8835 9043 36763 36763 LQVEELLK 8 1 0 Unmodified _LQVEELLK_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 490.2991 2 486.292225 970.569897 82138.39 0.16196 7.8762E-05 -1.2799 -0.0006224 -1.1179 -0.00054364 486.291754302817 490.298376605702 99.712 0.769 99.712 99.585 100.35 0 146 60 5 0 0 0 0.0031191 3 56384 97.798 18.682 1 1.7474 1.3658 0 16235000 6400900 9833900 23455 2038 8835 9043 36764;36765;36766 36764 LQVELDNVTGLLSQSDSK 18 1 0 Unmodified _LQVELDNVTGLLSQSDSK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 977.5146 2 973.507477 1945.0004 62247.96 0.6422 0.00062518 -0.061091 -5.9472E-05 0.58111 0.00056571 973.507560646565 977.514463172748 115.88 0.79047 115.88 115.66 116.45 0 282 51 10 0 0 0 2.0593E-16 3 73738 116.96 116.96 1 1.7365 2.0167 0 247930000 92523000 155410000 23456 81 8836 9044 36767;36768;36769 36767 LQVELDNVTGLLSQSDSK 18 1 0 Unmodified _LQVELDNVTGLLSQSDSK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 973.5077 2 973.507477 1945.0004 61841.47 0.47679 0.00046416 -0.024994 -2.4332E-05 0.4518 0.00043983 974.008977019199 977.514591232497 115.43 0.60319 115.43 115.18 115.78 0 254 38 11 0 0 0 2.6188E-16 4 75186 114.69 114.69 1 1.7739 2.0845 0 357820000 128020000 229790000 23457 81 8836 9044 36770;36771;36772;36773 36771 LQVELDNVTGLLSQSDSK 18 1 0 Unmodified _LQVELDNVTGLLSQSDSK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 978.0154 2 973.507477 1945.0004 62005.54 0.18813 0.00018315 0.66687 0.0006492 0.855 0.00083235 973.509126550356 977.515277504833 127.55 0.85086 127.55 127.19 128.04 -7.6294E-06 234 33 16 0 0 0 1.0327E-16 1 76841 121.13 121.13 1 2.9779 2.5725 0 107860000 27024000 80839000 23458 81 8836 9044 36774 36774 LQVELDNVTGLLSQSDSK 18 1 0 Unmodified _LQVELDNVTGLLSQSDSK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 978.016 2 973.507477 1945.0004 61254.01 0.24619 0.00023967 0.57396 0.00055875 0.82015 0.00079842 973.508977745714 978.016368297533 127.45 0.81852 127.45 127 127.82 7.6294E-06 170 33 11 0 0 0 0.0040748 1 75854 34.386 34.386 1 2.7936 2.3364 0 44503000 11352000 33151000 23459 81 8836 9044 36775 36775 LQVGQGVSLTLK 12 1 0 Unmodified _LQVGQGVSLTLK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.8814 2 621.874445 1241.73434 79796.36 0.51975 0.00032322 0.33113 0.00020592 0.85088 0.00052914 621.874641874895 625.881696818842 88.488 0.96107 88.488 88.045 89.006 0 324 71 6 0 0 0 0.012659 2 53161 44.847 35.659 1 1.1724 1.3194 0 72523000 32566000 39957000 23460 1741 8837 9045 36776;36777 36776 LQVGQGVSLTLK 12 1 0 Unmodified _LQVGQGVSLTLK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.8817 2 621.874445 1241.73434 79072.12 0.64764 0.00040275 0.43484 0.00027042 1.0825 0.00067317 621.874735898397 625.88176045024 87.638 0.94764 87.638 87.079 88.027 0 285 74 6 0 0 0 0.0021139 1 53874 59.418 47.255 1 1.1668 1.3035 0 89657000 40807000 48849000 23461 1741 8837 9045 36778 36778 LQVLIESK 8 1 0 Unmodified _LQVLIESK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.287 2 465.286943 928.559333 88152.78 0.16937 7.8807E-05 -0.091358 -4.2508E-05 0.078015 3.6299E-05 465.286771610819 469.29391083156 62.001 0.51103 62.001 61.808 62.319 0 200 42 8 0 0 0 0.00097269 2 35520 121.74 34.309 1 1.0153 1.1458 0 134470000 65846000 68625000 23462 925 8838 9046 36779;36780 36780 LQVLIESK 8 1 0 Unmodified _LQVLIESK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2866 2 465.286943 928.559333 89459.31 -0.079479 -3.6981E-05 -0.90654 -0.0004218 -0.98602 -0.00045878 465.286182183556 469.293652922319 60.621 0.59844 60.621 60.465 61.063 -3.8147E-06 191 51 7 0 0 0 2.8185E-05 2 35471 138.26 37.871 1 0.97711 1.0967 0 115420000 55092000 60331000 23463 925 8838 9046 36781;36782 36782 LQVLIESK 8 1 0 Unmodified _LQVLIESK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 469.294 2 465.286943 928.559333 87173.13 0.02577 1.1991E-05 0.29528 0.00013739 0.32105 0.00014938 465.286913970996 469.294107299662 71.228 0.63692 71.228 70.921 71.558 0 210 41 7 0 0 0 0.021237 2 37474 57.96 26.735 1 1.4924 1.1575 0 14003000 5509100 8493600 23464 925 8838 9046 36783;36784 36783 LQVLIESK 8 1 0 Unmodified _LQVLIESK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 465.2866 2 465.286943 928.559333 87808.34 -0.2384 -0.00011092 0.45335 0.00021094 0.21495 0.00010001 465.287062142529 469.29415366917 71.631 0.66991 71.631 71.289 71.959 7.6294E-06 208 43 6 0 0 0 0.016729 2 36875 60.91 25.417 1 1.4269 1.177 0 12030000 5299500 6730400 23465 925 8838 9046 36785;36786 36786 LQVLVGDVLK 10 1 0 Unmodified _LQVLVGDVLK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2;D6RCL3 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.8506 2 542.342249 1082.66995 83871.22 0.78916 0.00042799 -0.13315 -7.2215E-05 0.65601 0.00035578 542.342168907385 546.349156039826 101.3 0.76057 101.3 100.97 101.73 0 218 59 6 0 0 0 0.020901 2 62114 46.462 25.837 1 0.87775 0.88954 0 18216000 9866000 8349700 23466 786 8839 9047 36787;36788 36788 LQVLVGDVLK 10 1 0 Unmodified _LQVLVGDVLK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2;D6RCL3 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.343 2 542.342249 1082.66995 82712.44 0.65447 0.00035495 -0.032634 -1.7699E-05 0.62184 0.00033725 542.342195814929 546.349253750628 100.5 0.64073 100.5 100.23 100.87 0 182 52 6 0 0 0 0.0079558 2 63028 56.729 31.807 1 0.82578 0.89198 0 38359000 19947000 18412000 23467 786 8839 9047 36789;36790 36789 LQVLVGDVLK 10 1 0 Unmodified _LQVLVGDVLK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2;D6RCL3 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.3495 2 542.342249 1082.66995 82467.02 1.1093 0.0006016 -0.17369 -9.4197E-05 0.93557 0.0005074 542.342108254467 546.349109094745 113.76 0.5935 113.76 113.5 114.1 0 115 26 6 0 0 0 0.041181 1 66253 38.303 19.528 1 1.2953 1.0375 0 7311100 3173900 4137200 23468 786 8839 9047 36791 36791 LQVLVGDVLK 10 1 0 Unmodified _LQVLVGDVLK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2;D6RCL3 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.3495 2 542.342249 1082.66995 82719.97 0.64384 0.00034918 -0.11859 -6.4316E-05 0.52525 0.00028486 542.342119950906 546.349176805996 113.53 0.45374 113.53 113.31 113.77 -7.6294E-06 117 21 7 0 0 0 0.024135 2 65143 45.161 28.385 1 1.2121 1.0008 0 11411000 4961600 6449100 23469 786 8839 9047 36792;36793 36792 LQVTMPGIK 9 1 0 Oxidation (M) _LQVTM(ox)PGIK_ LQVTM(1)PGIK LQVTM(61.96)PGIK 0 1 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.7937 2 501.786253 1001.55795 87441.47 0.47524 0.00023847 -2.6295 -0.0013194 -2.1543 -0.001081 502.2869887599 505.793533734531 48.254 0.52486 48.254 47.925 48.449 3.8147E-06 119 43 6 0 0 0 0.0036175 1 26268 61.962 21.859 1 1.1587 1.1696 0 27351000 11653000 15697000 23470 1696 8840 9048 36794 36794 1529 LQVTNVLSQPLTQATVK 17 1 0 Unmodified _LQVTNVLSQPLTQATVK_ 0 0 0 B2RE46;P04844;B4DJL0;Q5JYR4;Q5JYR7 B2RE46 B2RE46 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.0353 2 920.530558 1839.04656 65958.74 0.7526 0.00069279 0.31417 0.0002892 1.0668 0.00098199 921.031915492113 924.537367430898 105.98 0.26549 105.98 105.84 106.1 0 53 20 4 0 0 0 0.016352 1 67397 27.681 21.648 1 0.84948 0.85735 0 8058900 4149700 3909200 23471 894 8841 9049 36795 36795 LQVVDQPLPVR 11 0 1 Unmodified _LQVVDQPLPVR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.3788 2 632.374612 1262.73467 76897.19 0.57976 0.00036663 0.004925 3.1145E-06 0.58469 0.00036974 632.374785211973 637.378628440915 83.157 0.54379 83.157 82.919 83.463 0 243 46 8 0 0 0 5.164E-10 2 49683 129.85 111.99 1 1.4078 1.5027 0 44375000 17303000 27073000 23472 587 8842 9050 36796;36797 36796 LQVVDQPLPVR 11 0 1 Unmodified _LQVVDQPLPVR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.3788 2 632.374612 1262.73467 76792.82 0.45374 0.00028694 0.071135 4.4984E-05 0.52488 0.00033192 632.374446847098 637.378799916831 82.098 0.49725 82.098 81.91 82.408 0 219 44 6 0 0 0 0.0012773 1 50165 68.735 58.503 1 1.4348 1.6538 0 72674000 30039000 42635000 23473 587 8842 9050 36798 36798 LQVVDQPLPVR 11 0 1 Unmodified _LQVVDQPLPVR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.3789 2 632.374612 1262.73467 NaN NaN NaN -0.31363 -0.00019833 NaN NaN NaN NaN 95.138 0.54294 95.138 94.929 95.472 0 0 0 0 0.046279 1 53247 45.368 33.878 1 NaN NaN 0 1421600 0 1421600 23474 587 8842 9050 36799 36799 LQVVDQPLPVR 11 0 1 Unmodified _LQVVDQPLPVR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.3776 2 632.374612 1262.73467 NaN NaN NaN -0.92229 -0.00058323 NaN NaN NaN NaN 95.04 0.46234 95.04 94.844 95.306 0 0 0 0 0.012815 1 52377 55.567 34.665 1 NaN NaN 0 1546500 0 1546500 23475 587 8842 9050 36800 36800 LQVVGR 6 0 1 Unmodified _LQVVGR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 336.2144 2 336.213581 670.412609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.889 1 26.889 26.389 27.389 0 0 0 0 0.039067 1 12200 89.08 4.7899 1 23476 1382 8843 9051 36801 36801 LQVVLNESNADTYAGRPLPSK 21 1 1 Unmodified _LQVVLNESNADTYAGRPLPSK_ 0 0 1 A6NHR9;J3KTL8;J3QSH1 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.4038 3 758.069246 2271.18591 69992.35 0.6925 0.00052497 -0.19343 -0.00014664 0.49907 0.00037833 758.403168467346 764.410904391936 78.069 0.50694 78.069 77.813 78.32 0 187 40 7 0 0 0 1.991E-07 2 46129 59.469 44.635 1 1.1317 1.2805 0 23341000 11941000 11401000 23477 684 8844 9052 36802;36803 36803 LQVVLNESNADTYAGRPLPSK 21 1 1 Unmodified _LQVVLNESNADTYAGRPLPSK_ 0 0 1 A6NHR9;J3KTL8;J3QSH1 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.0776 3 758.069246 2271.18591 70634.34 0.46465 0.00035224 0.11146 8.4493E-05 0.57611 0.00043673 758.069395314466 764.07694467556 77.034 0.56111 77.034 76.76 77.321 -7.6294E-06 187 46 6 0 0 0 9.093E-10 2 46474 86.625 75.165 1 1.0696 1.24 0 35316000 16308000 19008000 23478 684 8844 9052 36804;36805 36804 LQVVLNESNADTYAGRPLPSK 21 1 1 Unmodified _LQVVLNESNADTYAGRPLPSK_ 0 0 1 A6NHR9;J3KTL8;J3QSH1 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 758.4032 3 758.069246 2271.18591 69598.65 0.56565 0.0004288 0.012263 9.2963E-06 0.57791 0.0004381 758.40317286847 764.411240217104 89.783 0.46918 89.783 89.547 90.016 -7.6294E-06 201 29 10 0 0 0 7.7456E-06 2 49636 47.75 34.158 1 1.5331 1.3011 0 8714000 3334600 5379300 23479 684 8844 9052 36806;36807 36807 LQVVLNESNADTYAGRPLPSK 21 1 1 Unmodified _LQVVLNESNADTYAGRPLPSK_ 0 0 1 A6NHR9;J3KTL8;J3QSH1 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 764.4112 3 758.069246 2271.18591 69221.95 0.4347 0.00032953 0.018237 1.3825E-05 0.45293 0.00034335 758.402935149809 764.076712664595 89.595 0.52618 89.595 89.371 89.897 0 221 32 10 0 0 0 0.00063108 2 48651 34.346 20.293 1 1.5131 1.2729 0 7523100 2945600 4577500 23480 684 8844 9052 36808;36809 36808 LQVWDTAGQER 11 0 1 Unmodified _LQVWDTAGQER_ 0 0 0 A0A024RB27;Q504R6;P51153;D3DV69 A0A024RB27 A0A024RB27 hCG_24991;RAB13;hCG_1996054 Ras-related protein Rab-13 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.8297 2 651.825483 1301.63641 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.863 1 68.863 68.363 69.363 0 0 0 0 0.042997 1 36042 44.318 12.896 1 23481 322 8845 9053 36810 36810 LQVWDTAGQER 11 0 1 Unmodified _LQVWDTAGQER_ 0 0 0 A0A024RB27;Q504R6;P51153;D3DV69 A0A024RB27 A0A024RB27 hCG_24991;RAB13;hCG_1996054 Ras-related protein Rab-13 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.83 2 651.825483 1301.63641 NaN NaN NaN -0.17927 -0.00011686 NaN NaN NaN NaN 69.509 0.45124 69.509 69.227 69.678 0 0 0 0 0.051684 1 35631 43.77 16.655 1 NaN NaN 0 895600 0 895600 23482 322 8845 9053 36811 36811 LQWDLGLGHLPR 12 0 1 Unmodified _LQWDLGLGHLPR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.9297 3 468.929733 1403.76737 NaN NaN NaN -0.19415 -9.1041E-05 NaN NaN NaN NaN 105.93 0.70853 105.93 105.42 106.13 0 0 0 0 0.0024607 1 65427 57.175 42.613 1 NaN NaN 0 11049000 11049000 0 23483 907 8846 9054 36812 36812 LQWDLGLGHLPR 12 0 1 Unmodified _LQWDLGLGHLPR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.9301 3 468.929733 1403.76737 88251.61 0.46394 0.00021755 0.044735 2.0977E-05 0.50867 0.00023853 468.929615570616 472.265783947956 104.71 0.80165 104.71 104.29 105.1 0 330 63 7 0 0 0 5.7107E-05 1 66190 75.819 75.819 1 1.0742 1.1914 0 42714000 19972000 22742000 23484 907 8846 9054 36813 36813 LQWDLGLGHLPR 12 0 1 Unmodified _LQWDLGLGHLPR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 472.2661 3 468.929733 1403.76737 87933 0.3117 0.00014616 -0.2176 -0.00010204 0.094096 4.4124E-05 468.9295913306 472.265662219809 116.2 0.42744 116.2 116 116.43 -7.6294E-06 104 18 8 0 0 0 7.9851E-05 2 68192 73.632 73.632 1 1.2659 1.0863 0 8327500 3841800 4485800 23485 907 8846 9054 36814;36815 36814 LQWDLGLGHLPR 12 0 1 Unmodified _LQWDLGLGHLPR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 472.2656 3 468.929733 1403.76737 87852.71 0.59435 0.00027871 -0.28183 -0.00013216 0.31251 0.00014655 469.263752538761 472.265651251081 115.99 0.44467 115.99 115.77 116.21 0 104 22 7 0 0 0 0.0095759 2 67064 35.737 35.737 1 1.1346 0.92788 0 9123900 4722600 4401300 23486 907 8846 9054 36816;36817 36816 LQWQTTLGHAVLK 13 1 0 Unmodified _LQWQTTLGHAVLK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.6239 3 498.952426 1493.83545 86327.05 0.17848 8.9055E-05 0.5908 0.00029478 0.76929 0.00038384 498.952562171297 501.624160485714 83.133 0.75352 83.133 82.965 83.718 7.6294E-06 167 57 5 0 0 0 0.00032189 1 50914 71.176 71.176 1 0.96675 0.9889 0 25684000 13740000 11944000 23487 1718 8847 9055 36818 36818 LQWTSTDGLGVLIISPTR 18 0 1 Unmodified _LQWTSTDGLGVLIISPTR_ 0 0 0 Q13206;Q86VR6;E9PIF2;Q59EC7 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.5436 2 979.04129 1956.06803 NaN NaN NaN 1.5257 0.0014937 NaN NaN NaN NaN 126.08 0.21021 126.08 125.98 126.19 -7.6294E-06 0 0 0 0.0019631 1 81976 52.555 38.892 1 NaN NaN 0 1945500 1945500 0 23488 1708 8848 9056 36819 36819 LQYAVSGLEPLAWSEDHR 18 0 1 Unmodified _LQYAVSGLEPLAWSEDHR_ 0 0 0 Q9UKN8;Q05CN7;F2Z356 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.3497 3 691.012961 2070.01705 NaN NaN NaN -0.06999 -4.8364E-05 NaN NaN NaN NaN 105.78 0.49428 105.78 105.54 106.04 -7.6294E-06 0 0 0 0.042986 1 65533 24.714 15.308 1 NaN NaN 0 6210100 0 6210100 23489 2107 8849 9057 36820 36820 LQYAVSGLEPLAWSEDHR 18 0 1 Unmodified _LQYAVSGLEPLAWSEDHR_ 0 0 0 Q9UKN8;Q05CN7;F2Z356 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.6846 3 691.012961 2070.01705 NaN NaN NaN -0.72404 -0.00050032 NaN NaN NaN NaN 105.07 0.51904 105.07 104.76 105.28 0 0 0 0 0.013152 1 66683 30.684 15.594 1 NaN NaN 0 5518900 0 5518900 23490 2107 8849 9057 36821 36821 LQYFMEQFYGIIR 13 0 1 Oxidation (M) _LQYFM(ox)EQFYGIIR_ LQYFM(1)EQFYGIIR LQYFM(49.35)EQFYGIIR 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.4355 2 862.429258 1722.84396 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.61 1 115.61 115.11 116.11 7.6294E-06 0 0 0 0.0079469 1 73641 49.35 24.497 1 23491 1665 8850 9058 36822 36822 1453 LQYLIDLGR 9 0 1 Unmodified _LQYLIDLGR_ 0 0 0 E5RIZ4;B2R739;Q9P015;E5RHF4 E5RIZ4 E5RIZ4 MRPL15 39S ribosomal protein L15, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.821 2 545.816399 1089.61824 NaN NaN NaN 0.36471 0.00019907 NaN NaN NaN NaN 100.11 0.47688 100.11 99.91 100.39 -7.6294E-06 0 0 0 0.024253 1 61520 55.549 38.164 1 NaN NaN 0 4658100 0 4658100 23492 847 8851 9059 36823 36823 LQYNFDTIDQQFCDLADNK 19 1 0 Unmodified _LQYNFDTIDQQFCDLADNK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1179.5342 2 1174.52861 2347.04268 58495.29 0.17691 0.00020778 -0.49719 -0.00058397 -0.32028 -0.00037618 1175.53185667807 1179.03680311045 116.81 0.23805 116.81 116.68 116.92 7.6294E-06 58 16 5 0 0 0 0.007285 1 74659 29.328 27.749 1 1.139 1.173 0 10809000 5290700 5518300 23493 1945 8852 9060 36824 36824 LQYNFDTIDQQFCDLADNK 19 1 0 Unmodified _LQYNFDTIDQQFCDLADNK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1178.5363 2 1174.52861 2347.04268 58869.62 0.1236 0.00014517 0.23904 0.00028076 0.36264 0.00042593 1175.0300295192 1178.53693198646 116.4 0.25958 116.4 116.29 116.55 7.6294E-06 61 16 6 0 0 0 3.6646E-05 1 76171 52.555 52.555 1 1.3345 1.3712 0 9503300 4124000 5379300 23494 1945 8852 9060 36825 36825 LQYNFDTIDQQFCDLADNK 19 1 0 Unmodified _LQYNFDTIDQQFCDLADNK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1179.0386 2 1174.52861 2347.04268 55630.62 0.32887 0.00038626 -0.18019 -0.00021163 0.14868 0.00017463 1175.02990432181 1179.03714681226 128.82 0.43604 128.82 128.6 129.04 0 130 19 9 0 0 0 7.8318E-06 1 77776 76.358 76.358 1 3.0051 2.3507 0 11764000 2972200 8792000 23495 1945 8852 9060 36826 36826 LQYNFDTIDQQFCDLADNK 19 1 0 Unmodified _LQYNFDTIDQQFCDLADNK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1179.0382 2 1174.52861 2347.04268 56174.71 0.42303 0.00049686 -0.20846 -0.00024484 0.21457 0.00025201 1175.03001736142 1179.03724987191 128.64 0.52751 128.64 128.42 128.95 0 135 20 10 0 0 0 0.011336 1 76760 24.697 24.697 1 2.9713 2.3865 0 15251000 3700300 11551000 23496 1945 8852 9060 36827 36827 LRAEIDNVK 9 1 1 Unmodified _LRAEIDNVK_ 0 0 1 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.3038 2 529.303655 1056.59276 NaN NaN NaN 0.27672 0.00014647 NaN NaN NaN NaN 27.291 0.34157 27.291 27.059 27.401 -1.9073E-06 0 0 0 0.0018703 1 12524 99.013 59.011 1 NaN NaN 0 52715000 52715000 0 + 23497 1162 8853 9061 36828 36828 LRAEIDNVK 9 1 1 Unmodified _LRAEIDNVK_ 0 0 1 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 353.2046 3 353.204862 1056.59276 NaN NaN NaN -0.023205 -8.1961E-06 NaN NaN NaN NaN 27.283 0.26771 27.283 27.112 27.38 0 0 0 0 0.0062129 1 12526 72.643 44.63 1 NaN NaN 0 18248000 18248000 0 + 23498 1162 8853 9061 36829 36829 LRAPTSTEANHIR 13 0 2 Unmodified _LRAPTSTEANHIR_ 0 0 1 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.9395 3 489.267184 1464.77972 NaN NaN NaN 0.93038 0.0004552 NaN NaN NaN NaN 22.777 0.2353 22.777 22.674 22.91 -1.9073E-06 0 0 0 0.0029247 1 8746 66.989 56.344 1 NaN NaN 0 5800600 0 5800600 23499 790 8854 9062 36830 36830 LRDLEDSLAR 10 0 2 Unmodified _LRDLEDSLAR_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.3312 2 594.322576 1186.6306 77313.39 0.81836 0.00048637 0.029773 1.7695E-05 0.84813 0.00050407 594.322486281081 604.330816703052 46.694 0.46005 46.694 46.324 46.784 0 166 38 7 0 0 0 5.8985E-05 2 25148 104.52 75.436 1 1.8052 1.9697 0 153790000 73781000 80010000 23500 1440 8855 9063 36831;36832 36831 LRDLEDSLAR 10 0 2 Unmodified _LRDLEDSLAR_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 403.223 3 396.55081 1186.6306 94110.25 0.19828 7.8627E-05 -0.042749 -1.6952E-05 0.15553 6.1675E-05 396.550740716639 403.222888546924 46.73 0.5368 46.73 46.391 46.928 -3.8147E-06 177 46 6 0 0 0 0.0046831 1 25239 45.879 34.013 1 1.3717 1.4953 0 114040000 51117000 62924000 23501 1440 8855 9063 36833 36833 LRDLEDSLAR 10 0 2 Unmodified _LRDLEDSLAR_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.331 2 594.322576 1186.6306 77313.4 0.66421 0.00039476 0.18692 0.00011109 0.85113 0.00050585 594.32253357481 604.33089314139 46.828 0.45278 46.828 46.774 47.226 0 156 43 7 0 0 0 0.01085 2 25431 71.03 40.776 1 1.0765 1.1742 0 136810000 61820000 74990000 23502 1440 8855 9063 36834;36835 36834 LRDLEDSLAR 10 0 2 Unmodified _LRDLEDSLAR_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 403.223 3 396.55081 1186.6306 93412.29 0.26801 0.00010628 -0.066037 -2.6187E-05 0.20198 8.0094E-05 396.550670596699 403.222977617676 44.87 0.75491 44.87 44.601 45.356 0 276 61 6 0 0 0 0.00032012 2 24470 72.652 54.384 1 1.3723 1.6115 0 130130000 48120000 82006000 23503 1440 8855 9063 36836;36837 36836 LRDLEDSLAR 10 0 2 Unmodified _LRDLEDSLAR_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.3232 2 594.322576 1186.6306 77596.73 0.69971 0.00041585 -0.058627 -3.4843E-05 0.64108 0.00038101 594.322172095964 604.33086632259 44.849 0.81161 44.849 44.544 45.356 0 337 66 8 0 0 0 0.00073166 2 24472 96.171 65.917 1 1.2799 1.5314 0 269540000 110910000 158620000 23504 1440 8855 9063 36838;36839 36838 LRDLEDSLAR 10 0 2 Unmodified _LRDLEDSLAR_ 0 0 1 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 396.5508 3 396.55081 1186.6306 94415.73 -0.16243 -6.441E-05 0.047614 1.8882E-05 -0.11481 -4.5529E-05 396.550745488592 403.222942410422 53.276 0.81586 53.276 52.921 53.737 0 244 59 6 0 0 0 0.017242 1 25789 32.159 26.696 1 1.1588 1.0544 0 6848000 3286800 3561200 23505 1440 8855 9063 36840 36840 LRDPAQQVR 9 0 2 Unmodified _LRDPAQQVR_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 361.5405 3 361.540357 1081.59924 96847.26 -0.12603 -4.5567E-05 0.074088 2.6786E-05 -0.051947 -1.8781E-05 361.540383892891 368.212546514025 20.927 0.54999 20.927 20.708 21.258 0 140 24 9 0 0 0 2.9143E-08 2 7229 125.82 90.639 1 0.82515 0.89997 0 134850000 70779000 64067000 23506 908 8856 9064 36841;36842 36841 LRDPAQQVR 9 0 2 Unmodified _LRDPAQQVR_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.8069 2 541.806897 1081.59924 81746.86 0.38896 0.00021074 -0.22377 -0.00012124 0.16519 8.95E-05 541.806659995075 551.815100129167 20.903 0.45878 20.903 20.708 21.166 0 120 20 8 0 0 0 0.0032547 2 7256 96.936 67.878 1 0.95417 1.0402 0 114010000 57892000 56114000 23507 908 8856 9064 36843;36844 36843 LRDPAQQVR 9 0 2 Unmodified _LRDPAQQVR_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 361.5405 3 361.540357 1081.59924 98942.18 0.33734 0.00012196 -0.031225 -1.1289E-05 0.30612 0.00011067 361.540324164415 368.212576161247 20.643 0.59847 20.643 20.381 20.98 -1.9073E-06 91 20 8 0 0 0 5.399E-07 2 6811 120.99 89.878 1 0.8093 0.95812 0 178440000 100150000 78290000 23508 908 8856 9064 36845;36846 36845 LRDPAQQVR 9 0 2 Unmodified _LRDPAQQVR_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.8075 2 541.806897 1081.59924 82543.57 0.67533 0.0003659 -0.2114 -0.00011454 0.46393 0.00025136 541.806654631566 551.815044058545 20.605 0.41197 20.605 20.417 20.829 0 73 12 8 0 0 0 0.0027551 2 6957 98.233 62.788 1 0.83713 0.98023 0 116200000 60152000 56047000 23509 908 8856 9064 36847;36848 36847 LRDPAQQVR 9 0 2 Unmodified _LRDPAQQVR_ 0 0 1 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 361.5404 3 361.540357 1081.59924 97224.19 -0.1995 -7.2127E-05 0.26345 9.5247E-05 0.063948 2.312E-05 361.540417349545 368.212621404527 22.536 0.64042 22.536 22.281 22.921 0 122 26 8 0 0 0 0.0095501 2 7239 43.308 28.164 1 1.6566 1.3615 0 28584000 11815000 16769000 23510 908 8856 9064 36849;36850 36849 LRDQGGVVLR 10 0 2 Unmodified _LRDQGGVVLR_ 0 0 1 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 378.2286 3 371.556007 1111.64619 97247.14 0.005699 2.1175E-06 0.27584 0.00010249 0.28154 0.00010461 371.556010261877 378.228371195504 32.802 0.1782 32.802 32.675 32.853 0 28 6 6 0 0 0 0.058734 1 13724 20.777 8.2009 1 2.0011 1.8094 0 3367300 1174700 2192600 23511 162 8857 9065 36851 36851 LRDYQVR 7 0 2 Unmodified _LRDYQVR_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 317.1788 3 317.178648 948.514114 104828.5 -0.10955 -3.4746E-05 0.16692 5.2943E-05 0.05737 1.8197E-05 317.178724873745 323.850839887898 20.161 0.38819 20.161 20.043 20.432 0 38 13 6 0 0 0 0.015631 2 6656 64.236 29.412 1 2.4005 2.6122 0 63299000 17878000 45421000 23512 1391 8858 9066 36852;36853 36853 LRDYQVR 7 0 2 Unmodified _LRDYQVR_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 323.8506 3 317.178648 948.514114 104669.5 -0.024994 -7.9275E-06 -0.013429 -4.2595E-06 -0.038423 -1.2187E-05 317.178546871495 323.850700717043 19.88 0.4446 19.88 19.689 20.133 0 64 17 7 0 0 0 0.017345 1 6247 57.281 24.81 1 2.6247 3.0297 0 66456000 20621000 45835000 23513 1391 8858 9066 36854 36854 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.3126 3 514.977806 1541.91159 86318.29 0.7326 0.00037727 -0.30837 -0.00015881 0.42422 0.00021847 514.977535309179 521.649786534884 127.58 1.2073 127.58 126.91 128.12 -7.6294E-06 156 72 5 0 0 0 0.0028445 1 83070 49.423 49.423 1 1.0654 1.1915 0 7156500 2930600 4225800 23514 824 8859 9067 36855 36855 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.6505 3 514.977806 1541.91159 86318.29 0.55369 0.00028514 -0.25514 -0.00013139 0.29855 0.00015375 515.312064379625 521.649751964216 128.37 0.80928 128.37 127.99 128.79 0 137 52 5 0 0 0 0.00031227 2 83553 67.456 67.456 1 1.048 1.1724 0 7039900 4200000 2839900 23515 824 8859 9067 36856;36857 36856 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.65 3 514.977806 1541.91159 87239.93 0.98107 0.00050523 -0.49399 -0.00025439 0.48708 0.00025084 514.977591843556 521.649698381076 129.8 0.5023 129.8 129.53 130.03 1.5259E-05 63 27 4 0 0 0 0.0002816 1 84591 68.44 68.44 1 1.2456 1.4019 0 5490300 2228300 3261900 23516 824 8859 9067 36858 36858 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.9772 3 514.977806 1541.91159 86221.84 0.65804 0.00033888 -0.30527 -0.00015721 0.35277 0.00018167 515.312170154208 521.649791955818 130.47 0.61841 130.47 130.35 130.97 0 93 39 5 0 0 0 0.0011108 2 85087 58.674 58.674 1 1.033 1.1797 0 3124600 1257300 1867300 23517 824 8859 9067 36859;36860 36859 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.3127 3 514.977806 1541.91159 NaN NaN NaN -0.096262 -4.9573E-05 NaN NaN NaN NaN 126.53 0.25011 126.53 126.44 126.69 7.6294E-06 0 0 0 0.031556 1 82388 46.88 42.637 1 NaN NaN 0 1924000 1924000 0 23518 824 8859 9067 36861 36861 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.6499 3 514.977806 1541.91159 NaN NaN NaN 0.59381 0.0003058 NaN NaN NaN NaN 128.99 0.13387 128.99 128.95 129.09 0 0 0 0 0.00072041 1 84133 85.845 73.284 1 NaN NaN 0 4969900 0 4969900 23519 824 8859 9067 36862 36862 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.6505 3 514.977806 1541.91159 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.47 1 126.47 125.97 126.97 0 0 0 0 0.032781 1 82300 40.725 28.164 1 23520 824 8859 9067 36863 36863 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.9778 3 514.977806 1541.91159 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.16 1 129.16 128.66 129.66 0 0 0 0 0.0032264 1 84220 62.14 33.508 1 23521 824 8859 9067 36864 36864 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.9773 3 514.977806 1541.91159 85597.05 0.58292 0.00030019 -0.3806 -0.000196 0.20232 0.00010419 514.977483240306 521.649919270512 125.34 0.40858 125.34 125.13 125.54 0 79 28 5 0 0 0 0.0015732 1 83556 56.122 56.122 1 0.95044 0.93528 0 5852900 3080800 2772000 23522 824 8859 9067 36865 36865 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.65 3 514.977806 1541.91159 84835.23 0.69678 0.00035882 0.059809 3.08E-05 0.75659 0.00038963 515.312154993934 521.649983977236 125.81 0.26333 125.81 125.65 125.91 0 48 16 4 0 0 0 0.0085489 1 83856 40.725 40.725 1 1.2258 1.213 0 7136300 3487100 3649300 23523 824 8859 9067 36866 36866 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.3121 3 514.977806 1541.91159 85532.08 0.76065 0.00039172 -0.29693 -0.00015291 0.46372 0.00023881 514.977613762672 521.649790209399 126.32 1.285 126.32 125.9 127.18 0 249 79 5 0 0 0 0.00034215 1 84146 66.498 66.498 1 1.008 1.0199 0 10937000 4424700 6512400 23524 824 8859 9067 36867 36867 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.9775 3 514.977806 1541.91159 85006.02 0.65413 0.00033686 -0.25603 -0.00013185 0.3981 0.00020501 514.977693191961 521.649841382303 127.53 0.87269 127.53 127.02 127.89 0 223 54 6 0 0 0 0.00034215 3 85297 66.498 66.498 1 1.0414 1.0499 0 10199000 4856100 5343300 23525 824 8859 9067 36868;36869;36870 36870 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.6498 3 514.977806 1541.91159 85402 0.69715 0.00035902 -0.27857 -0.00014346 0.41858 0.00021556 514.977612998556 521.649878937591 128.26 0.5966 128.26 127.87 128.47 0 154 36 6 0 0 0 0.00049228 1 85509 62.088 62.088 1 0.90155 0.89973 0 8394000 3861700 4532300 23526 824 8859 9067 36871 36871 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.6504 3 514.977806 1541.91159 100991.1 0.094371 4.8599E-05 -0.052966 -2.7276E-05 0.041406 2.1323E-05 514.977723095662 521.649992724331 128.83 0.094696 128.83 128.78 128.87 0 16 9 4 0 0 0 0.00048281 2 86081 62.14 62.14 1 0.67437 0.66379 0 6090000 3536700 2553300 23527 824 8859 9067 36872;36873 36873 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.6501 3 514.977806 1541.91159 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.63 1 129.63 129.13 130.13 0 0 0 0 0.0011518 1 86602 68.44 55.88 1 23528 824 8859 9067 36874 36874 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.9781 3 514.977806 1541.91159 81494.34 0.80334 0.0004137 -0.29212 -0.00015044 0.51122 0.00026327 514.977700269383 521.649882245686 134.47 0.27362 134.47 134.35 134.62 0 66 10 11 0 0 0 8.7553E-06 2 82094 103.88 103.88 1 0.94418 0.75023 0 104550000 54398000 50155000 23529 824 8859 9067 36875;36876 36876 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.978 3 514.977806 1541.91159 82740.09 0.54028 0.00027823 -0.48266 -0.00024856 0.057623 2.9675E-05 514.977645016615 521.649808514263 134.37 0.31895 134.37 134.24 134.56 0 73 12 10 0 0 0 1.1021E-05 2 81100 101.6 101.6 1 0.95959 0.91192 0 115970000 60237000 55729000 23530 824 8859 9067 36877;36878 36878 LRECLPLIIFLR 12 0 2 Unmodified _LRECLPLIIFLR_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;B7Z1M6 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.4655 2 771.963071 1541.91159 68746.4 0.8964 0.00069199 -0.4036 -0.00031156 0.4928 0.00038042 772.464348409904 781.971240065567 134.37 0.214 134.37 134.26 134.47 0 43 8 8 0 0 0 0.050321 1 81117 47.559 47.559 1 0.92077 0.858 0 32262000 16880000 15382000 23531 824 8859 9067 36879 36879 LREDENAEPVGTTYQK 16 1 1 Unmodified _LREDENAEPVGTTYQK_ 0 0 1 Q16643;D6R9W4;B3KSQ7 Q16643 Q16643 DBN1 Drebrin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 623.6439 3 617.3024 1848.88537 79668.07 0.49824 0.00030757 -0.63581 -0.00039248 -0.13756 -8.4918E-05 617.636351625495 623.309230025003 34.595 0.38617 34.595 34.423 34.809 0 128 30 6 0 0 0 0.04264 1 15312 20.091 18.222 1 1.7347 1.55 0 2110200 896020 1214200 23532 1773 8860 9068 36880 36880 LREDENAEPVGTTYQK 16 1 1 Unmodified _LREDENAEPVGTTYQK_ 0 0 1 Q16643;D6R9W4;B3KSQ7 Q16643 Q16643 DBN1 Drebrin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.6367 3 617.3024 1848.88537 77333.98 0.60647 0.00037437 -0.44886 -0.00027708 0.15761 9.7291E-05 617.302351652156 623.309474674128 34.792 0.47125 34.792 34.561 35.032 0 129 36 6 0 0 0 0.056132 1 14950 18.156 14.607 1 1.3 1.1206 0 1975500 839960 1135600 23533 1773 8860 9068 36881 36881 LREDLER 7 0 2 Unmodified _LREDLER_ 0 0 1 P62269;J3JS69 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.7536 2 465.753798 929.493044 86716.46 0.072454 3.3746E-05 -0.54226 -0.00025256 -0.46981 -0.00021881 465.753583712627 475.761945427085 20.456 0.82779 20.456 20.205 21.033 0 152 35 10 0 0 0 2.8485E-10 1 6851 164.72 60.358 1 1.0726 1.1741 0 443040000 214880000 228170000 23534 1639 8861 9069 36882 36882 LREDLER 7 0 2 Unmodified _LREDLER_ 0 0 1 P62269;J3JS69 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 310.8383 3 310.838291 929.493044 106195.9 -0.11002 -3.4198E-05 -0.13946 -4.3349E-05 -0.24948 -7.7547E-05 310.838228744733 317.510373527423 20.457 0.6656 20.457 20.205 20.871 -1.9073E-06 117 27 9 0 0 0 0.00034666 2 6869 132.08 26.775 1 1.0572 1.1533 0 147500000 67944000 79555000 23535 1639 8861 9069 36883;36884 36884 LREDLER 7 0 2 Unmodified _LREDLER_ 0 0 1 P62269;J3JS69 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.7539 2 465.753798 929.493044 87123.63 -0.023332 -1.0867E-05 0.49745 0.00023169 0.47412 0.00022082 465.753860637824 475.762561676526 20.206 0.80011 20.206 19.954 20.754 0 132 27 10 0 0 0 7.3079E-05 1 6470 150.4 46.492 1 1.0754 1.2919 0 316040000 151400000 164640000 23536 1639 8861 9069 36885 36885 LREDLER 7 0 2 Unmodified _LREDLER_ 0 0 1 P62269;J3JS69 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 310.8381 3 310.838291 929.493044 103562.4 -0.0061923 -1.9248E-06 0.075082 2.3338E-05 0.06889 2.1414E-05 310.838285846369 317.510432248227 20.205 0.55045 20.205 19.934 20.485 0 85 19 7 0 0 0 0.0047282 2 6494 117.4 12.259 1 1.0294 1.2028 0 106560000 51026000 55533000 23537 1639 8861 9069 36886;36887 36887 LREFEEGLVSQYK 13 1 1 Unmodified _LREFEEGLVSQYK_ 0 0 1 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.2863 3 533.278867 1596.81477 81982.22 0.48593 0.00025913 -0.46687 -0.00024897 0.019054 1.0161E-05 533.277999243692 539.285881773075 78.769 0.65164 78.769 78.515 79.166 0 151 38 7 0 0 0 0.019446 1 42327 30.961 30.961 1 1.1021 0.90304 0 4816500 2261800 2554700 23538 780 8862 9070 36888 36888 LREFEEGLVSQYK 13 1 1 Unmodified _LREFEEGLVSQYK_ 0 0 1 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.6205 3 533.278867 1596.81477 84128.35 0.47884 0.00025535 -0.55929 -0.00029826 -0.080453 -4.2904E-05 533.278108853556 539.285926223893 78.845 0.83685 78.845 78.608 79.445 0 206 52 8 0 0 0 0.044678 1 41556 22.803 22.803 1 1.0426 0.88694 0 3157600 1497600 1660000 23539 780 8862 9070 36889 36889 LRENQLPR 8 0 2 Unmodified _LRENQLPR_ 0 0 1 A0A087WVZ9;E5KT65;P19388;B4DJ89;A0A087WWX0;A0A0A0MQR7 A0A087WVZ9 A0A087WVZ9 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 349.2052 3 342.533202 1024.57778 104369.4 -0.51458 -0.00017626 0.065439 2.2415E-05 -0.44914 -0.00015384 342.533110730143 349.205356622701 22.013 0.24118 22.013 21.866 22.107 0 31 9 4 0 0 0 0.036229 1 8050 35.445 13.359 1 1.1801 1.2244 0 12876000 5910200 6965400 23540 423 8863 9071 36890 36890 LREQVEER 8 0 2 Unmodified _LREQVEER_ 0 0 1 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.7827 2 529.783087 1057.55162 82350.95 0.36651 0.00019417 -0.021442 -1.1359E-05 0.34507 0.00018281 529.782990032026 539.791346157015 16.7 0.52661 16.7 16.585 17.111 0 77 18 7 0 0 0 0.0046171 2 3977 139.74 61.223 1 0.71072 0.77425 0 91123000 49490000 41633000 23541 785 8864 9072 36891;36892 36892 LREQVEER 8 0 2 Unmodified _LREQVEER_ 0 0 1 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 353.5241 3 353.524484 1057.55162 99312.66 0.038289 1.3536E-05 -0.12324 -4.357E-05 -0.084955 -3.0034E-05 353.524322043748 360.196713729191 16.708 0.44361 16.708 16.604 17.047 0 80 15 9 0 0 0 0.0013258 2 3974 98.582 42.984 1 0.68558 0.74545 0 48733000 27891000 20842000 23542 785 8864 9072 36893;36894 36893 LRFESQEMK 9 1 1 Oxidation (M) _LRFESQEM(ox)K_ LRFESQEM(1)K LRFESQEM(68.37)K 0 1 1 O96028;Q05CW4;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.2925 2 592.29243 1182.57031 77569.91 0.55556 0.00032906 1.6509 0.00097784 2.2065 0.0013069 592.292571698838 601.304193504785 21.783 0.27849 21.783 21.567 21.845 0 65 14 7 0 0 0 0.0040619 1 7877 68.371 31.306 1 0.98524 1.1167 0 16845000 9895700 6949200 23543 1435 8865 9073 36895 36895 1135 LRGDAAAGPGPGAGAGAAAEPEPR 24 0 2 Unmodified _LRGDAAAGPGPGAGAGAAAEPEPR_ 0 0 1 Q6DKJ4;A0A0G2JQK5 Q6DKJ4 Q6DKJ4 NXN Nucleoredoxin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.6947 3 706.022519 2115.04573 73086.71 0.71308 0.00050345 0.036664 2.5886E-05 0.74975 0.00052934 706.35689359789 713.029014952001 33.839 0.20061 33.839 33.714 33.915 0 51 16 5 0 0 0 5.1074E-14 3 17007 86.617 64.924 1 1.9575 1.9801 0 10879000 3242400 7636900 23544 1841 8866 9074 36896;36897;36898 36897 LRLDSIVIQQGR 12 0 2 Unmodified _LRLDSIVIQQGR_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2855 3 466.612292 1396.81505 87286.77 0.38145 0.00017799 -0.44563 -0.00020794 -0.064183 -2.9949E-05 466.946256208296 473.284252623694 79.04 0.80264 79.04 78.511 79.314 0 316 73 6 0 0 0 0.00026749 1 46731 56.951 51.046 1 2.6014 2.8347 0 100350000 28920000 71431000 23545 1391 8867 9075 36899 36899 LRLDSIVIQQGR 12 0 2 Unmodified _LRLDSIVIQQGR_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.2842 3 466.612292 1396.81505 NaN NaN NaN -0.21451 -0.00010009 NaN NaN NaN NaN 89.45 1.3421 89.45 88.75 90.093 0 0 0 0 0.0082218 1 49386 56.951 49.75 1 NaN NaN 0 30771000 0 30771000 23546 1391 8867 9075 36900 36900 LRLDSIVIQQGR 12 0 2 Unmodified _LRLDSIVIQQGR_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.2846 3 466.612292 1396.81505 NaN NaN NaN -0.24049 -0.00011221 NaN NaN NaN NaN 89.217 0.78933 89.217 88.975 89.764 0 0 0 0 0.0065754 1 48482 59.975 54.316 1 NaN NaN 0 25828000 0 25828000 23547 1391 8867 9075 36901 36901 LRLEEDKPAVER 12 1 2 Unmodified _LRLEEDKPAVER_ 0 0 2 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.938 3 485.603574 1453.78889 88469.11 1.0627 0.00051604 0.067467 3.2762E-05 1.1301 0.0005488 485.60357858246 494.947059778277 29.788 0.34528 29.788 29.64 29.985 0 86 24 6 0 0 0 0.0034216 1 14444 49.243 39.956 1 0.99279 1.1197 0 23582000 13895000 9687600 23548 876 8868 9076 36902 36902 LRLEEDKPAVER 12 1 2 Unmodified _LRLEEDKPAVER_ 0 0 2 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.947 3 485.603574 1453.78889 88064.17 0.050307 2.4429E-05 -0.10521 -5.109E-05 -0.054902 -2.6661E-05 485.603641771018 494.947088643568 35.575 0.49369 35.575 35.358 35.852 0 221 41 8 0 0 0 0.019948 1 15803 32.734 23.201 1 1.2551 1.177 0 6594700 2480200 4114500 23549 876 8868 9076 36903 36903 LRLEEDKPAVER 12 1 2 Unmodified _LRLEEDKPAVER_ 0 0 2 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.9471 3 485.603574 1453.78889 90072.59 0.37185 0.00018057 -0.1347 -6.5412E-05 0.23715 0.00011516 485.603696003817 494.946802767044 35.198 0.4111 35.198 35.01 35.421 3.8147E-06 145 37 6 0 0 0 0.020613 1 15236 30.484 18.124 1 1.3509 1.3426 0 5764900 1970000 3795000 23550 876 8868 9076 36904 36904 LRNDLLNIIR 10 0 2 Unmodified _LRNDLLNIIR_ 0 0 1 Q15554;H3BR06;U3KQ35;H3BTA7;J3KSJ9 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 420.5944 3 413.922578 1238.7459 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.057 1 93.057 92.557 93.557 0 0 0 0 0.038135 1 56411 41.54 13.335 1 23551 1762 8869 9077 36905 36905 LRNDPLNQNK 10 1 1 Unmodified _LRNDPLNQNK_ 0 0 1 Q9UBB5;O60535;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2;NY-CO-41 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.3398 2 606.328193 1210.64183 77850.59 0.23821 0.00014443 0.32206 0.00019527 0.56027 0.00033971 606.327816629697 615.340146713455 20.016 0.19902 20.016 19.934 20.133 0 28 7 6 0 0 0 0.006203 1 6355 75.378 75.378 1 0.71559 0.79446 0 10255000 6006000 4249400 23552 2096 8870 9078 36906 36906 LRPEREPR 8 0 3 Unmodified _LRPEREPR_ 0 0 2 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 361.5457 3 351.536835 1051.58868 NaN NaN NaN 0.68125 0.00023949 NaN NaN NaN NaN 14.985 0.17536 14.985 14.872 15.047 0 0 0 0 0.013091 1 2763 60.59 35.771 1 NaN NaN 0 1787000 0 1787000 23553 862 8871 9079 36907 36907 LRPFVDGTAGASDPPCVR 18 0 2 Unmodified _LRPFVDGTAGASDPPCVR_ 0 0 1 Q14807;H3BQB9;B4DNF2 Q14807 Q14807 KIF22 Kinesin-like protein KIF22 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.6595 3 638.98787 1913.94178 73879.75 0.48145 0.00030764 0.014357 9.1741E-06 0.49581 0.00031681 638.987956564622 645.659696837028 67.225 0.57865 67.225 66.967 67.546 0 227 45 7 0 0 0 0.00045431 1 38882 38.418 38.418 1 0.72106 0.78235 0 27766000 16142000 11624000 23554 1745 8872 9080 36908 36908 LRPFVDGTAGASDPPCVR 18 0 2 Unmodified _LRPFVDGTAGASDPPCVR_ 0 0 1 Q14807;H3BQB9;B4DNF2 Q14807 Q14807 KIF22 Kinesin-like protein KIF22 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.9883 3 638.98787 1913.94178 73062.3 0.4051 0.00025885 -0.14655 -9.3646E-05 0.25854 0.00016521 639.322488447027 645.659828309445 65.698 0.60825 65.698 65.425 66.033 0 259 52 7 0 0 0 1.2488E-05 1 38704 68.243 68.243 1 0.80456 0.91959 0 45230000 22420000 22810000 23555 1745 8872 9080 36909 36909 LRPFVDGTAGASDPPCVR 18 0 2 Unmodified _LRPFVDGTAGASDPPCVR_ 0 0 1 Q14807;H3BQB9;B4DNF2 Q14807 Q14807 KIF22 Kinesin-like protein KIF22 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.6597 3 638.98787 1913.94178 73915.52 0.50358 0.00032178 -0.38176 -0.00024394 0.12182 7.7841E-05 639.322195606684 645.659976780881 76.569 0.57928 76.569 76.322 76.901 0 256 40 9 0 0 0 1.3078E-05 2 40827 67.418 67.418 1 1.4367 1.2156 0 9352900 3674900 5678000 23556 1745 8872 9080 36910;36911 36911 LRPFVDGTAGASDPPCVR 18 0 2 Unmodified _LRPFVDGTAGASDPPCVR_ 0 0 1 Q14807;H3BQB9;B4DNF2 Q14807 Q14807 KIF22 Kinesin-like protein KIF22 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.994 3 638.98787 1913.94178 73630.05 0.51092 0.00032647 -0.4519 -0.00028876 0.059024 3.7715E-05 638.987766769384 645.660055642613 76.765 0.65945 76.765 76.506 77.166 -7.6294E-06 243 44 8 0 0 0 1.3659E-05 2 40134 66.606 66.606 1 1.6081 1.467 0 8114300 3135000 4979400 23557 1745 8872 9080 36912;36913 36913 LRPIAVIK 8 1 1 Unmodified _LRPIAVIK_ 0 0 1 Q9Y3I0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 309.887 3 303.879651 908.617122 108488.2 0.14118 4.2903E-05 0.015501 4.7105E-06 0.15668 4.7613E-05 303.879610624761 309.887079636058 49.547 0.28144 49.547 49.387 49.669 0 50 16 4 0 0 0 0.0067248 2 27210 55.531 34.905 1 1.3978 1.6578 0 42361000 18965000 23397000 23558 2137 8873 9081 36914;36915 36914 LRPIAVIK 8 1 1 Unmodified _LRPIAVIK_ 0 0 1 Q9Y3I0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 303.8796 3 303.879651 908.617122 109347.5 0.6841 0.00020788 0.20725 6.2979E-05 0.89135 0.00027086 303.879600141353 309.887153700127 47.334 0.4325 47.334 47.147 47.58 0 85 29 5 0 0 0 0.0043829 2 26270 66.073 37.855 1 1.2029 1.3872 0 29183000 11095000 18088000 23559 2137 8873 9081 36916;36917 36917 LRPSVLDLSTLSTVISK 17 1 1 Unmodified _LRPSVLDLSTLSTVISK_ 0 0 1 B4DVS1;H3BU53 B4DVS1 B4DVS1 MGA ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.364 3 610.362931 1828.06696 NaN NaN NaN 0.43767 0.00026714 NaN NaN NaN NaN 116.82 0.38338 116.82 116.61 117 0 0 0 0 0.0071672 1 76492 47.223 17.882 1 NaN NaN 0 5331500 5331500 0 23560 1042 8874 9082 36918 36918 LRPVNPNPLATK 12 1 1 Unmodified _LRPVNPNPLATK_ 0 0 1 P51116;I3L1Z2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.5982 3 440.597983 1318.77212 90894.7 0.11151 4.9133E-05 0.17065 7.5186E-05 0.28216 0.00012432 440.598034673081 446.605540104603 47.939 0.58189 47.939 47.682 48.264 0 193 51 5 0 0 0 0.031783 1 26011 20.107 20.107 1 1.3459 1.6156 0 62788000 27389000 35399000 23561 1593 8875 9083 36919 36919 LRPVNPNPLATK 12 1 1 Unmodified _LRPVNPNPLATK_ 0 0 1 P51116;I3L1Z2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.4046 2 660.393336 1318.77212 76693.41 0.37508 0.0002477 -0.22562 -0.000149 0.14946 9.8702E-05 660.39303164191 669.404486357422 46.057 0.28783 46.057 45.902 46.19 0 80 23 4 0 0 0 0.00035301 2 25321 97.813 84.46 1 1.2919 1.4664 0 17635000 5781500 11853000 23562 1593 8875 9083 36920;36921 36920 LRPVTLTEMNYSK 13 1 1 Oxidation (M) _LRPVTLTEM(ox)NYSK_ LRPVTLTEM(1)NYSK LRPVTLTEM(50.09)NYSK 0 1 1 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.2844 3 523.276469 1566.80758 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.795 1 47.795 47.295 48.295 0 0 0 0 0.0028791 1 25968 50.088 45.373 1 23563 590 8876 9084 36922 36922 444 LRSDAGLESDTAMK 14 1 1 Oxidation (M) _LRSDAGLESDTAM(ox)K_ LRSDAGLESDTAM(1)K LRSDAGLESDTAM(62.41)K 0 1 1 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.3762 2 755.364312 1508.71407 70058.3 0.4022 0.00030381 0.45695 0.00034516 0.85915 0.00064897 755.364253215578 764.375903638589 22.912 0.31179 22.912 22.768 23.08 0 49 16 5 0 0 0 0.00021095 2 8883 62.408 59.57 1 0.82467 0.89172 0 14853000 6516200 8336800 23564 2065 8877 9085 36923;36924 36923 1894 LRSDAGLESDTAMK 14 1 1 Oxidation (M) _LRSDAGLESDTAM(ox)K_ LRSDAGLESDTAM(1)K LRSDAGLESDTAM(74.61)K 0 1 1 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.3755 2 755.364312 1508.71407 69369.6 0.55264 0.00041745 0.64 0.00048343 1.1926 0.00090088 755.365606120827 764.376060003525 22.509 0.48072 22.509 22.263 22.744 0 52 20 7 0 0 0 0.0001382 2 8560 74.611 63.46 1 1.3465 1.4912 0 8145500 3665300 4480200 23565 2065 8877 9085 36925;36926 36926 1894 LRSEIDNVK 9 1 1 Unmodified _LRSEIDNVK_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.3013 2 537.301113 1072.58767 NaN NaN NaN -0.46512 -0.00024991 NaN NaN NaN NaN 23.407 1.3234 23.407 23.184 24.508 0 0 0 0 0.00020454 1 9202 112.75 41.829 1 NaN NaN 0 863140000 863140000 0 + 23566 1308;1309 8878 9086 36927 36927 LRSEIDNVK 9 1 1 Unmodified _LRSEIDNVK_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 358.5364 3 358.536501 1072.58767 NaN NaN NaN -0.21318 -7.6433E-05 NaN NaN NaN NaN 23.399 0.77009 23.399 23.184 23.954 0 0 0 0 0.0021235 1 9210 71.349 18.624 1 NaN NaN 0 196040000 196040000 0 + 23567 1308;1309 8878 9086 36928 36928 LRSEIDNVK 9 1 1 Unmodified _LRSEIDNVK_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.3015 2 537.301113 1072.58767 NaN NaN NaN -0.27548 -0.00014802 NaN NaN NaN NaN 22.732 1.0011 22.732 22.513 23.514 0 0 0 0 0.00024555 1 8623 111.61 43.614 1 NaN NaN 0 573000000 573000000 0 + 23568 1308;1309 8878 9086 36929 36929 LRSEIDNVK 9 1 1 Unmodified _LRSEIDNVK_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 358.5367 3 358.536501 1072.58767 NaN NaN NaN -0.12096 -4.337E-05 NaN NaN NaN NaN 22.754 0.66111 22.754 22.563 23.224 0 0 0 0 0.001185 1 8640 77.662 27.309 1 NaN NaN 0 144690000 144690000 0 + 23569 1308;1309 8878 9086 36930 36930 LRSEIDNVK 9 1 1 Unmodified _LRSEIDNVK_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.3011 2 537.301113 1072.58767 NaN NaN NaN -0.52982 -0.00028467 NaN NaN NaN NaN 25.253 1.7681 25.253 25.019 26.787 0 0 0 0 0.045922 1 8577 78.264 25.782 1 NaN NaN 0 81440000 81440000 0 + 23570 1308;1309 8878 9086 36931 36931 LRSEIDNVKK 10 2 1 Unmodified _LRSEIDNVKK_ 0 0 2 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.2343 3 401.234822 1200.68264 NaN NaN NaN -0.73383 -0.00029444 NaN NaN NaN NaN 18.324 0.24368 18.324 18.238 18.481 0 0 0 0 1.1681E-11 1 5030 123.96 77.227 1 NaN NaN 0 18955000 18955000 0 + 23571 1308;1309 8879 9087 36932 36932 LRSEIDNVKK 10 2 1 Unmodified _LRSEIDNVKK_ 0 0 2 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3483 2 601.348594 1200.68264 NaN NaN NaN 0.9121 0.00054849 NaN NaN NaN NaN 18.361 0.21702 18.361 18.264 18.481 0 0 0 0 0.043267 1 5055 83.456 28.848 1 NaN NaN 0 2560200 2560200 0 + 23572 1308;1309 8879 9087 36933 36933 LRSPQILVPTLFNLLSR 17 0 2 Unmodified _LRSPQILVPTLFNLLSR_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.0712 3 656.398199 1966.17277 74098.41 0.13206 8.6687E-05 0.45267 0.00029713 0.58473 0.00038382 656.732778142341 663.070807439766 133.33 0.20245 133.33 133.22 133.43 0 22 5 7 0 0 0 3.2869E-05 2 87308 69.148 67.414 1 0.94692 1.0292 0 41999000 22812000 19187000 23573 897 8880 9088 36934;36935 36935 LRSPQILVPTLFNLLSR 17 0 2 Unmodified _LRSPQILVPTLFNLLSR_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.7328 3 656.398199 1966.17277 75414.8 0.12749 8.3687E-05 0.21791 0.00014303 0.3454 0.00022672 656.732499021137 663.070497700167 133.32 0.18051 133.32 133.19 133.37 0 23 4 9 0 0 0 3.2905E-05 3 89522 69.081 67.936 1 1.0925 1.264 0 72933000 36542000 36391000 23574 897 8880 9088 36936;36937;36938 36938 LRTETQNALK 10 1 1 Unmodified _LRTETQNALK_ 0 0 1 A4LAA3;P46100;A0A096LNR8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.3328 2 587.332944 1172.65134 79121.51 0.61241 0.00035969 -0.5844 -0.00034324 0.028004 1.6448E-05 587.332467361883 596.343838978671 19.964 0.18504 19.964 19.888 20.073 0 28 7 6 0 0 0 4.6947E-05 2 6311 106.2 106.2 1 0.87617 0.99265 0 16638000 9154100 7484300 23575 672 8881 9089 36939;36940 36940 LRVDPVNFK 9 1 1 Unmodified _LRVDPVNFK_ 0 0 1 CON__P01966;E9LUX2;Q96T46;P78461;Q86YQ4;Q86YL2;Q6J1Z9;Q9NQT3;Q86YQ1;U6A216;Q4ZGM8;E9M4D4;E1B2D1;G3V1N2;V9H1D9;I1VZV6;D1MGQ2;A0A1K0GXZ1;A0A1S5UZ39;P69905 CON__P01966 CON__P01966 HBA2;HBA1 Hemoglobin subunit alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 363.213 3 363.213469 1086.61858 NaN NaN NaN -0.2448 -8.8913E-05 NaN NaN NaN NaN 58.74 0.65603 58.74 58.53 59.186 0 0 0 0 0.017361 1 33314 60.828 0 1 NaN NaN 0 25219000 25219000 0 + 23576 1149 8882 9090 36941 36941 LRVDPVNFK 9 1 1 Unmodified _LRVDPVNFK_ 0 0 1 CON__P01966;E9LUX2;Q96T46;P78461;Q86YQ4;Q86YL2;Q6J1Z9;Q9NQT3;Q86YQ1;U6A216;Q4ZGM8;E9M4D4;E1B2D1;G3V1N2;V9H1D9;I1VZV6;D1MGQ2;A0A1K0GXZ1;A0A1S5UZ39;P69905 CON__P01966 CON__P01966 HBA2;HBA1 Hemoglobin subunit alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3164 2 544.316566 1086.61858 NaN NaN NaN -0.12409 -6.7547E-05 NaN NaN NaN NaN 58.74 0.51241 58.74 58.584 59.096 0 0 0 0 0.035101 1 33339 76.827 0 1 NaN NaN 0 37822000 37822000 0 + 23577 1149 8882 9090 36942 36942 LRVDPVNFK 9 1 1 Unmodified _LRVDPVNFK_ 0 0 1 CON__P01966;E9LUX2;Q96T46;P78461;Q86YQ4;Q86YL2;Q6J1Z9;Q9NQT3;Q86YQ1;U6A216;Q4ZGM8;E9M4D4;E1B2D1;G3V1N2;V9H1D9;I1VZV6;D1MGQ2;A0A1K0GXZ1;A0A1S5UZ39;P69905 CON__P01966 CON__P01966 HBA2;HBA1 Hemoglobin subunit alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.3168 2 544.316566 1086.61858 NaN NaN NaN 0.78961 0.0004298 NaN NaN NaN NaN 57.016 0.47595 57.016 56.763 57.239 0 0 0 0 0.0010969 1 32966 102.62 0 1 NaN NaN 0 24691000 24691000 0 + 23578 1149 8882 9090 36943 36943 LRVEFPR 7 0 2 Unmodified _LRVEFPR_ 0 0 1 J3KTL2;Q07955;Q59FA2;A8K1L8;Q13242;A8K3M9;S4R3G0;B4DFT9 J3KTL2;Q13242 J3KTL2 SRSF1;SRSF9 Serine/arginine-rich splicing factor 1;Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 306.1833 3 306.183622 915.529036 106994.3 0.2968 9.0874E-05 0.43473 0.00013311 0.73152 0.00022398 306.183732404893 312.855853270147 54.415 0.54099 54.415 54.144 54.685 0 174 46 6 0 0 0 0.011469 3 30546 84.244 50.505 1 1.3141 1.4307 0 75308000 31150000 44159000 23579 1333;1709 8883 9091 36944;36945;36946 36945 LRVEFPR 7 0 2 Unmodified _LRVEFPR_ 0 0 1 J3KTL2;Q07955;Q59FA2;A8K1L8;Q13242;A8K3M9;S4R3G0;B4DFT9 J3KTL2;Q13242 J3KTL2 SRSF1;SRSF9 Serine/arginine-rich splicing factor 1;Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 312.8557 3 306.183622 915.529036 106790.6 0.37821 0.0001158 -0.15199 -4.6536E-05 0.22622 6.9265E-05 306.183506219066 312.855679593914 52.087 0.78835 52.087 51.833 52.622 0 264 59 6 0 0 0 0.01281 2 29474 74.439 49.438 1 1.3464 1.5523 0 63381000 28179000 35202000 23580 1333;1709 8883 9091 36947;36948 36947 LSAAIVLK 8 1 0 Unmodified _LSAAIVLK_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.781 2 407.773471 813.53239 94880.61 -0.23897 -9.7445E-05 0.39201 0.00015985 0.15304 6.2404E-05 407.773452979439 411.780791130539 72.573 0.38329 72.573 72.293 72.677 0 80 27 5 0 0 0 0.012693 1 42509 67.032 28.24 1 1.3614 1.3516 0 8136400 3600900 4535400 23581 1070 8884 9092 36949 36949 LSAAVTEAFVR 11 0 1 Unmodified _LSAAVTEAFVR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.3304 2 582.324588 1162.63462 79447.93 0.68206 0.00039718 0.23799 0.00013859 0.92005 0.00053577 582.324851083705 587.328621923906 83.036 0.46141 83.035 82.838 83.3 -7.6294E-06 144 40 4 0 0 0 1.2492E-05 1 49592 123.63 55.633 1 0.90493 0.92574 0 33482000 17528000 15954000 23582 363 8885 9093 36950 36950 LSAAVTEAFVR 11 0 1 Unmodified _LSAAVTEAFVR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.3253 2 582.324588 1162.63462 79987.57 0.67319 0.00039201 0.035058 2.0415E-05 0.70824 0.00041243 582.324784721227 587.328643570219 81.926 0.4594 81.926 81.778 82.237 0 191 39 7 0 0 0 5.7131E-08 2 50107 116.3 89.921 1 0.91293 1.0498 0 53207000 28995000 24212000 23583 363 8885 9093 36951;36952 36952 LSAEENPDDSEVPSSSGINSTK 22 1 0 Unmodified _LSAEENPDDSEVPSSSGINSTK_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1136.5259 2 1132.01405 2262.01354 59084.75 -0.18281 -0.00020694 -0.024366 -2.7583E-05 -0.20718 -0.00023453 1132.51533322031 1136.0209303934 53.88 0.35394 53.88 53.74 54.094 0 117 28 6 0 0 0 6.3729E-08 2 30176 66.285 66.285 1 1.0026 1.0107 0 10028000 4642500 5386000 23584 2150 8886 9094 36953;36954 36954 LSAEENPDDSEVPSSSGINSTK 22 1 0 Unmodified _LSAEENPDDSEVPSSSGINSTK_ 0 0 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1136.0205 2 1132.01405 2262.01354 58803.65 -0.16537 -0.0001872 0.30603 0.00034643 0.14066 0.00015922 1132.51632632867 1136.5230351406 52.929 0.39362 52.929 52.701 53.095 -3.8147E-06 131 32 6 0 0 0 5.8928E-06 2 30162 48.704 48.704 1 1.1839 1.1994 0 9048900 3519000 5529900 23585 2150 8886 9094 36955;36956 36955 LSAFFEEHISSVLSDYK 17 1 0 Unmodified _LSAFFEEHISSVLSDYK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.9954 3 657.994796 1970.96256 76016.66 0.85839 0.00056482 0.045042 2.9637E-05 0.90343 0.00059445 658.329019201575 661.000558445718 112.54 0.76763 112.54 112.25 113.02 0 284 56 7 0 0 0 4.9399E-05 2 71035 53.773 53.773 1 0.73283 0.74833 0 17820000 10644000 7176300 23586 1942 8887 9095 36957;36958 36957 LSAFFEEHISSVLSDYK 17 1 0 Unmodified _LSAFFEEHISSVLSDYK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.0012 3 657.994796 1970.96256 76849.98 0.9447 0.00062161 -0.1089 -7.1655E-05 0.8358 0.00054995 658.328960721844 660.666206691483 111.74 0.87035 111.74 111.42 112.29 0 274 61 8 0 0 0 0.00053099 3 72132 38.824 38.824 1 0.74506 0.78142 0 19529000 10912000 8616300 23587 1942 8887 9095 36959;36960;36961 36959 LSAFFEEHISSVLSDYK 17 1 0 Unmodified _LSAFFEEHISSVLSDYK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.6672 3 657.994796 1970.96256 NaN NaN NaN -0.13258 -8.7239E-05 NaN NaN NaN NaN 112.06 0.18589 112.06 111.96 112.15 0 0 0 0 0.0069182 1 72460 39.143 22.478 1 NaN NaN 0 4689700 0 4689700 23588 1942 8887 9095 36962 36962 LSAGFDFK 8 1 0 Unmodified _LSAGFDFK_ 0 0 0 Q2TB10;B7Z4V7 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.7292 2 442.729261 883.443968 91663.2 0.10957 4.8508E-05 0.068532 3.0341E-05 0.1781 7.8849E-05 442.729194647078 446.736293086428 72.051 0.39079 72.051 71.828 72.219 0 125 29 6 0 0 0 0.012634 2 42091 67.169 27.507 1 1.1722 1.2264 0 30078000 13557000 16521000 23589 1777 8888 9096 36963;36964 36964 LSAGFDFK 8 1 0 Unmodified _LSAGFDFK_ 0 0 0 Q2TB10;B7Z4V7 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.7366 2 442.729261 883.443968 90690.77 0.20461 9.0587E-05 0.095474 4.2269E-05 0.30008 0.00013286 442.729132702416 446.73633047395 70.766 0.37669 70.766 70.564 70.941 0 148 30 7 0 0 0 0.026101 2 42252 54.776 22.821 1 1.0795 1.1228 0 33756000 16188000 17568000 23590 1777 8888 9096 36965;36966 36966 LSALAPLFGSLK 12 1 0 Unmodified _LSALAPLFGSLK_ 0 0 0 Q8IY21 Q8IY21 Q8IY21 DDX60 Probable ATP-dependent RNA helicase DDX60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.377 2 608.868631 1215.72271 82171.69 0.66587 0.00040543 0.53728 0.00032713 1.2031 0.00073256 608.868757894341 613.378378007536 131.85 0.5524 131.85 131.65 132.21 0 78 25 6 0 0 0 0.0024379 2 80032 58.592 58.592 1 1.5436 1.3014 0 1417600 631720 785890 23591 1896 8889 9097 36967;36968 36967 LSALAPLFGSLK 12 1 0 Unmodified _LSALAPLFGSLK_ 0 0 0 Q8IY21 Q8IY21 Q8IY21 DDX60 Probable ATP-dependent RNA helicase DDX60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.8767 2 608.868631 1215.72271 79507.56 0.88286 0.00053754 1.3718 0.00083526 2.2547 0.0013728 608.869069647329 613.378686811166 131.59 0.58199 131.59 131.39 131.97 0 48 21 5 0 0 0 0.019661 1 78954 39.917 39.917 1 1.5182 1.2686 0 1529900 737110 792800 23592 1896 8889 9097 36969 36969 LSALGNVTTCNDYVALVHPDLDR 23 0 1 Unmodified _LSALGNVTTCNDYVALVHPDLDR_ 0 0 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.7579 3 848.423472 2542.24859 66036.52 0.77394 0.00065663 -0.4321 -0.00036661 0.34184 0.00029002 848.75728317142 852.093747422955 108.14 0.42738 108.14 107.93 108.36 -7.6294E-06 179 31 8 0 0 0 3.9971E-17 1 69156 108.37 108.37 1 0.6603 0.70011 0 23863000 15344000 8519600 23593 1619 8890 9098 36970 36970 LSALGNVTTCNDYVALVHPDLDR 23 0 1 Unmodified _LSALGNVTTCNDYVALVHPDLDR_ 0 0 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.4231 3 848.423472 2542.24859 65194.52 1.0361 0.00087901 -0.49767 -0.00042223 0.53839 0.00045678 848.423179684062 852.093335553175 119.53 0.35337 119.53 119.33 119.69 0 63 13 8 0 0 0 0.0013712 1 70774 25.021 25.021 1 1.0888 0.93646 0 7671800 3497100 4174700 23594 1619 8890 9098 36971 36971 LSALGNVTTCNDYVALVHPDLDR 23 0 1 Unmodified _LSALGNVTTCNDYVALVHPDLDR_ 0 0 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.4242 3 848.423472 2542.24859 67124.3 0.66706 0.00056595 -0.036652 -3.1096E-05 0.63041 0.00053486 848.42369942142 852.093781646946 119.28 0.33987 119.28 119.11 119.45 0 72 14 8 0 0 0 0.0099351 2 69713 21.564 21.564 1 1.2128 0.97862 0 10943000 6976200 3966800 23595 1619 8890 9098 36972;36973 36972 LSALGNVTTCNDYVALVHPDLDRETEEILADVLK 34 1 1 Unmodified _LSALGNVTTCNDYVALVHPDLDRETEEILADVLK_ 0 0 1 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 947.2341 4 946.733194 3782.90367 61209.55 0.081545 7.7202E-05 -0.4217 -0.00039924 -0.34016 -0.00032204 946.983866033197 951.489082388007 133.36 0.30522 133.36 133.16 133.46 0 52 8 11 0 0 0 3.2195E-19 1 87340 64.701 64.701 1 0.63213 0.75886 0 63714000 36877000 26837000 23596 1619 8891 9099 36974 36974 LSALGNVTTCNDYVALVHPDLDRETEEILADVLK 34 1 1 Unmodified _LSALGNVTTCNDYVALVHPDLDRETEEILADVLK_ 0 0 1 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 951.4891 4 946.733194 3782.90367 60921.26 -0.011464 -1.0853E-05 0.098019 9.2798E-05 0.086555 8.1944E-05 946.984015053897 951.49042555901 133.32 0.33582 133.32 133.19 133.53 0 63 8 13 0 0 0 1.4611E-44 1 89520 117.6 117.6 1 0.65641 0.7785 0 274710000 158910000 115810000 23597 1619 8891 9099 36975 36975 LSALLFK 7 1 0 Unmodified _LSALLFK_ 0 0 0 E7ETD6;Q12830;Q9H5E0;J3QQQ8;J3KSK9;E9PE19;B4DJV8 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 396.2564 2 396.254914 790.495276 97311.65 0.33767 0.0001338 0.27359 0.00010841 0.61126 0.00024221 396.254858891212 400.262048656207 86.294 0.56467 86.294 86.051 86.616 0 151 43 5 0 0 0 0.026928 2 51827 86.866 0 1 0.74668 0.7373 0 25325000 14676000 10650000 23598 1224 8892 9100 36976;36977 36976 LSALLFK 7 1 0 Unmodified _LSALLFK_ 0 0 0 E7ETD6;Q12830;Q9H5E0;J3QQQ8;J3KSK9;E9PE19;B4DJV8 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.262 2 396.254914 790.495276 97510 0.48319 0.00019147 -0.25828 -0.00010234 0.22492 8.9124E-05 396.25468278107 400.261837920484 85.165 0.54957 85.165 84.898 85.447 0 154 46 4 0 0 0 0.026752 2 52270 78.616 0 1 0.75254 0.75969 0 16300000 8911500 7388700 23599 1224 8892 9100 36978;36979 36979 LSASSLTMESFAFLWAGGR 19 0 1 Oxidation (M) _LSASSLTM(ox)ESFAFLWAGGR_ LSASSLTM(1)ESFAFLWAGGR LSASSLTM(47.91)ESFAFLWAGGR 0 1 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q5RI18 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1029.0043 2 1024.00131 2045.98806 NaN NaN NaN -0.073639 -7.5406E-05 NaN NaN NaN NaN 131.06 0.64288 131.06 130.69 131.34 0 0 0 0 0.00078004 1 85329 47.915 39.61 1 NaN NaN 0 4472200 0 4472200 23600 999 8893 9101 36980 36980 790 LSASSLTMESFAFLWAGGR 19 0 1 Oxidation (M) _LSASSLTM(ox)ESFAFLWAGGR_ LSASSLTM(1)ESFAFLWAGGR LSASSLTM(83.62)ESFAFLWAGGR 0 1 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q5RI18 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1029.5081 2 1024.00131 2045.98806 63616.3 0.61195 0.00062664 0.092869 9.5098E-05 0.70482 0.00072174 1024.50233155446 1029.50743617106 130.64 0.63243 130.64 130.31 130.94 0 120 41 5 0 0 0 1.3268E-06 2 87199 83.617 75.893 1 2.0818 2.0685 0 7413000 2615500 4797400 23601 999 8893 9101 36981;36982 36981 790 LSATIPK 7 1 0 Unmodified _LSATIPK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.2287 2 365.228897 728.44324 100168.2 0.0079484 2.903E-06 0.14944 5.458E-05 0.15739 5.7483E-05 365.228830128867 369.235969585418 39.949 0.49983 39.949 39.637 40.137 -3.8147E-06 170 40 6 0 0 0 0.037624 1 20731 60.76 8.9727 1 0.913 0.98613 0 35035000 19335000 15700000 23602 895 8894 9102 36983 36983 LSCLAVGLALLK 12 1 0 Unmodified _LSCLAVGLALLK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.3846 2 629.383591 1256.75263 77405.2 0.71406 0.00044941 -0.11583 -7.2899E-05 0.59823 0.00037652 629.383398209124 633.390654514527 120.93 0.42707 120.93 120.69 121.12 0 105 30 6 0 0 0 6.2879E-05 2 77992 97.965 97.965 1 0.99289 0.97847 0 8554600 4240800 4313800 23603 790 8895 9103 36984;36985 36985 LSCLAVGLALLK 12 1 0 Unmodified _LSCLAVGLALLK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.3829 2 629.383591 1256.75263 77515.97 1.057 0.00066523 -0.25948 -0.00016331 0.79748 0.00050192 629.383279956715 633.390675289535 120.36 0.38992 120.36 120.13 120.52 0 90 27 4 0 0 0 8.5077E-05 2 79444 96.665 96.665 1 1.1421 1.1938 0 10182000 5450300 4731800 23604 790 8895 9103 36986;36987 36986 LSCLAVGLALLK 12 1 0 Unmodified _LSCLAVGLALLK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.3915 2 629.383591 1256.75263 74905.88 0.71682 0.00045116 -0.056212 -3.5379E-05 0.66061 0.00041578 629.383594571305 633.390906182293 133.78 0.42419 133.78 133.54 133.97 1.5259E-05 70 16 6 0 0 0 0.00032618 2 81528 72.643 72.643 1 1.2408 1.0309 0 2276000 976690 1299400 23605 790 8895 9103 36988;36989 36989 LSCLAVGLALLK 12 1 0 Unmodified _LSCLAVGLALLK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.8927 2 629.383591 1256.75263 77464.1 1.1121 0.00069997 -0.80246 -0.00050505 0.30969 0.00019491 629.38322428531 633.390458054109 133.45 0.47888 133.45 133.21 133.69 0 57 17 6 0 0 0 0.0002356 2 80357 73.985 73.985 1 1.2661 1.0495 0 1754700 890340 864390 23606 790 8895 9103 36990;36991 36990 LSCPALGISK 10 1 0 Unmodified _LSCPALGISK_ 0 0 0 O43463;Q14828 O43463 O43463 SUV39H1;MG44 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.297 2 523.289159 1044.56377 82402.79 0.26989 0.00014123 0.36243 0.00018965 0.63232 0.00033088 523.289242931665 527.296462296433 72.922 0.7728 72.922 72.527 73.3 0 211 51 6 0 0 0 0.0016591 2 38456 72.643 71.451 1 1.9151 1.5363 0 7574300 2741500 4832800 23607 1385 8896 9104 36992;36993 36992 LSCPALGISK 10 1 0 Unmodified _LSCPALGISK_ 0 0 0 O43463;Q14828 O43463 O43463 SUV39H1;MG44 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.2892 2 523.289159 1044.56377 83490.3 0.31604 0.00016538 -0.066549 -3.4825E-05 0.24949 0.00013056 523.289048127055 527.296280459017 73.376 0.77641 73.376 72.965 73.741 0 223 53 6 0 0 0 0.00015294 2 37960 95.608 95.608 1 2.165 1.763 0 7356300 2392600 4963700 23608 1385 8896 9104 36994;36995 36995 LSCPITALGR 10 0 1 Unmodified _LSCPITALGR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.3043 2 544.300059 1086.58556 83221.11 0.36852 0.00020059 0.7212 0.00039255 1.0897 0.00059314 544.30068153742 549.304362714652 68.759 0.2805 68.759 68.59 68.871 0 72 24 4 0 0 0 0.00016057 2 40898 95.358 68.228 1 0.90949 0.90034 0 12314000 6856500 5457700 23609 1897 8897 9105 36996;36997 36997 LSCQNLGAVLDDVPVQGFFK 20 1 0 Unmodified _LSCQNLGAVLDDVPVQGFFK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1104.5641 2 1104.0619 2206.10924 57690.41 0.65828 0.00072678 -0.12302 -0.00013582 0.53526 0.00059096 1104.56314231481 1108.57014639238 130.82 0.58365 130.82 130.51 131.1 0 228 36 9 0 0 0 8.1276E-10 3 85226 99.011 99.011 1 1.0083 0.99431 0 24792000 12427000 12365000 23610 1741 8898 9106 36998;36999;37000 36999 LSCQNLGAVLDDVPVQGFFK 20 1 0 Unmodified _LSCQNLGAVLDDVPVQGFFK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1108.5687 2 1104.0619 2206.10924 57917.14 0.37343 0.00041229 -0.03288 -3.6301E-05 0.34055 0.00037599 1104.56363006562 1108.5702320149 130.43 0.50349 130.43 130.16 130.66 0 219 32 10 0 0 0 1.3605E-06 2 87085 74.987 74.987 1 1.004 1.0611 0 35577000 15593000 19984000 23611 1741 8898 9106 37001;37002 37001 LSCSTWNYQK 10 1 0 Unmodified _LSCSTWNYQK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.7957 2 643.795337 1285.57612 76917.36 0.8308 0.00053487 -1.3392 -0.00086214 -0.50835 -0.00032727 643.795233213086 647.802305126825 42.219 0.53318 42.219 41.957 42.49 0 169 39 7 0 0 0 0.0026988 1 22260 67.897 38.736 1 1.0313 1.0887 0 30953000 13647000 17306000 23612 486 8899 9107 37003 37003 LSCSTWNYQK 10 1 0 Unmodified _LSCSTWNYQK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.8033 2 643.795337 1285.57612 77139.29 0.99087 0.00063792 -0.19006 -0.00012236 0.80081 0.00051556 643.795400361522 647.802553758888 41.515 0.48962 41.515 41.257 41.747 0 146 40 5 0 0 0 0.00095588 1 22254 78.516 45.254 1 0.79323 0.79859 0 13477000 7805400 5672000 23613 486 8899 9107 37004 37004 LSCSTWNYQK 10 1 0 Unmodified _LSCSTWNYQK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.7961 2 643.795337 1285.57612 75556.27 0.48766 0.00031395 0.68085 0.00043833 1.1685 0.00075228 643.795501912378 647.803297753775 49.298 0.61981 49.298 49.005 49.625 0 211 50 6 0 0 0 0.022058 1 24034 45.997 33.207 1 1.0226 0.8056 0 5651500 2799700 2851800 23614 486 8899 9107 37005 37005 LSCTEHDPCGPNPLEPGEIR 20 0 1 Unmodified _LSCTEHDPCGPNPLEPGEIR_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.6837 3 760.012415 2277.01542 69847.49 0.62419 0.00047439 -0.63701 -0.00048414 -0.012827 -9.749E-06 760.346988112031 763.347933661154 75.496 0.49046 75.496 75.291 75.781 0 144 34 7 0 0 0 0.038645 2 40152 14.015 13.999 1 1.4617 1.2483 0 2778300 1131400 1646900 23615 898 8900 9108 37006;37007 37006 LSCTEHDPCGPNPLEPGEIR 20 0 1 Unmodified _LSCTEHDPCGPNPLEPGEIR_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.3471 3 760.012415 2277.01542 69300.38 0.53898 0.00040963 -0.14611 -0.00011104 0.39287 0.00029859 760.346639623575 763.683062450426 75.837 0.47958 75.837 75.596 76.076 0 122 32 6 0 0 0 0.01257 1 39596 21.398 21.381 1 1.6797 1.4541 0 1621600 572180 1049400 23616 898 8900 9108 37008 37008 LSDADLAGPLQK 12 1 0 Unmodified _LSDADLAGPLQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.3399 2 614.33261 1226.65067 78360.3 0.25435 0.00015625 0.14092 8.6573E-05 0.39527 0.00024283 614.332672345369 618.339712222972 69.74 0.79115 69.74 69.363 70.155 0 371 69 9 0 0 0 1.9919E-29 2 40397 169.93 141.24 1 0.91959 1.086 0 374010000 199010000 175000000 23617 908 8901 9109 37009;37010 37010 LSDADLAGPLQK 12 1 0 Unmodified _LSDADLAGPLQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.3328 2 614.33261 1226.65067 78001.72 0.44494 0.00027334 0.082535 5.0704E-05 0.52748 0.00032405 614.332615575549 618.339716390383 68.53 0.80336 68.53 68.217 69.02 -7.6294E-06 329 66 9 0 0 0 7.9658E-88 2 40626 227.08 189.27 1 0.90684 1.0679 0 478380000 256230000 222150000 23618 908 8901 9109 37011;37012 37012 LSDADLAGPLQK 12 1 0 Unmodified _LSDADLAGPLQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.3403 2 614.33261 1226.65067 77848.64 0.31584 0.00019403 0.13842 8.5036E-05 0.45426 0.00027907 614.332742723842 618.339728909563 79.647 1.1854 79.647 79.263 80.448 0 440 75 10 0 0 0 0.00019205 3 42783 83.862 66.426 1 1.5906 1.3426 0 56719000 22088000 34631000 23619 908 8901 9109 37013;37014;37015 37013 LSDADLAGPLQK 12 1 0 Unmodified _LSDADLAGPLQK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.3323 2 614.33261 1226.65067 77700.9 0.3454 0.00021219 0.054137 3.3258E-05 0.39954 0.00024545 614.332631365201 618.339677459799 79.919 1.1114 79.919 79.579 80.69 0 414 69 9 0 0 0 0.00024011 2 42127 86.898 69.462 1 1.6154 1.3599 0 52383000 20361000 32021000 23620 908 8901 9109 37016;37017 37017 LSDESIFSAFLSVVGK 16 1 0 Unmodified _LSDESIFSAFLSVVGK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.4818 2 849.951078 1697.8876 65848.42 0.45543 0.00038709 0.94172 0.00080042 1.3972 0.0011875 849.952253801225 854.460210234652 133.67 0.23918 133.67 133.54 133.78 0 11 4 5 0 0 0 1.0638E-06 1 87659 96.745 90.641 1 0.66171 0.64821 0 21753000 11726000 10027000 23621 908 8902 9110 37018 37018 LSDESIFSAFLSVVGK 16 1 0 Unmodified _LSDESIFSAFLSVVGK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 854.9998 2 849.951078 1697.8876 65986.11 0.78269 0.00066524 0.24721 0.00021011 1.0299 0.00087536 849.951273869515 853.958098978076 133.63 0.21695 133.63 133.48 133.7 0 13 3 6 0 0 0 0.0001529 1 89890 66.84 53.86 1 1.0396 1.0733 0 18359000 7936600 10422000 23622 908 8902 9110 37019 37019 LSDFNDITNMLLLK 14 1 0 Oxidation (M) _LSDFNDITNM(ox)LLLK_ LSDFNDITNM(1)LLLK LSDFNDITNM(134.75)LLLK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.9329 2 826.931831 1651.84911 NaN NaN NaN 0.012508 1.0343E-05 NaN NaN NaN NaN 119.04 0.49656 119.04 118.8 119.29 0 0 0 0 1.2106E-22 2 76545 134.75 100.22 1 NaN NaN 0 11386000 11386000 0 23623 1665 8903 9111 37020;37021 37020 1454 LSDFNDITNMLLLK 14 1 0 Oxidation (M) _LSDFNDITNM(ox)LLLK_ LSDFNDITNM(1)LLLK LSDFNDITNM(118.28)LLLK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.9312 2 826.931831 1651.84911 NaN NaN NaN 0.33615 0.00027797 NaN NaN NaN NaN 118.64 0.46521 118.64 118.34 118.81 0 0 0 0 1.4631E-12 1 78057 118.28 95.637 1 NaN NaN 0 10593000 10593000 0 23624 1665 8903 9111 37022 37022 1454 LSDFNDITNMLLLK 14 1 0 Oxidation (M) _LSDFNDITNM(ox)LLLK_ LSDFNDITNM(1)LLLK LSDFNDITNM(98.9)LLLK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 826.9341 2 826.931831 1651.84911 65717.66 1.0487 0.00086724 0.005647 4.6697E-06 1.0544 0.00087191 826.932010010609 831.437969245803 131.03 0.57585 131.03 130.76 131.34 0 96 26 6 0 0 0 5.7545E-06 1 78555 98.898 87.167 1 0.28883 0.23511 0 4557900 3263300 1294600 23625 1665 8903 9111 37023 37023 1454 LSDFNDITNMLLLK 14 1 0 Oxidation (M) _LSDFNDITNM(ox)LLLK_ LSDFNDITNM(1)LLLK LSDFNDITNM(44.56)LLLK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.4339 2 826.931831 1651.84911 66787.32 1.1786 0.00097463 -0.0070678 -5.8446E-06 1.1715 0.00096878 826.931626608732 830.939680043021 131.83 0.69769 131.83 131.41 132.11 0 78 27 7 0 0 0 0.0024063 1 79141 44.564 40.048 1 0.26303 0.21492 0 5596400 4753800 842590 23626 1665 8903 9111 37024 37024 1454 LSDGFNGADLR 11 0 1 Unmodified _LSDGFNGADLR_ 0 0 0 V9HW24;A0A087X2I1;P62333;H0YJC0 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.7852 2 582.785827 1163.5571 NaN NaN NaN -1.8384 -0.0010714 NaN NaN NaN NaN 59.912 0.24303 59.912 59.788 60.031 -3.8147E-06 0 0 0 9.7016E-05 1 34170 93.111 47.393 1 NaN NaN 0 6251900 6251900 0 23627 454 8904 9112 37025 37025 LSDGFNGADLR 11 0 1 Unmodified _LSDGFNGADLR_ 0 0 0 V9HW24;A0A087X2I1;P62333;H0YJC0 V9HW24 V9HW24 HEL-S-73;PSMC6 26S protease regulatory subunit 10B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.7896 2 582.785827 1163.5571 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.903 1 59.903 59.403 60.403 3.8147E-06 0 0 0 0.00013053 1 34174 81.338 50.264 1 23628 454 8904 9112 37026 37026 LSDGIGVMLPQVLK 14 1 0 Oxidation (M) _LSDGIGVM(ox)LPQVLK_ LSDGIGVM(1)LPQVLK LSDGIGVM(52.49)LPQVLK 0 1 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.428 2 743.420902 1484.82725 73488.39 0.84864 0.0006309 -0.0053929 -4.0092E-06 0.84325 0.00062689 743.420942598475 747.42783803028 113.26 0.39202 113.26 113.02 113.41 7.6294E-06 64 28 4 0 0 0 0.00077804 1 71668 52.49 52.49 1 1.8816 1.908 0 5937100 2241900 3695200 23629 1601 8905 9113 37027 37027 1386 LSDGIGVMLPQVLK 14 1 0 Oxidation (M) _LSDGIGVM(ox)LPQVLK_ LSDGIGVM(1)LPQVLK LSDGIGVM(67.21)LPQVLK 0 1 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.4296 2 743.420902 1484.82725 71481.21 0.78667 0.00058483 0.069043 5.1328E-05 0.85571 0.00063615 743.421387582795 747.428222087406 112.63 0.45018 112.63 112.47 112.93 0 91 30 5 0 0 0 0.00010416 1 72885 67.207 67.207 1 2.0992 2.1147 0 7267000 2503500 4763500 23630 1601 8905 9113 37028 37028 1386 LSDIGEGIR 9 0 1 Unmodified _LSDIGEGIR_ 0 0 0 P11182;Q5VVL7 P11182 P11182 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.2658 2 480.261456 958.50836 NaN NaN NaN 1.6658 0.00080004 NaN NaN NaN NaN 46.748 0.23418 46.748 46.694 46.928 0 0 0 0 0.023196 1 25295 56.378 18.733 1 NaN NaN 0 8507600 0 8507600 23631 1469 8906 9114 37029 37029 LSDLVNTAILIALNK 15 1 0 Unmodified _LSDLVNTAILIALNK_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.4794 2 799.479805 1596.94506 70052.15 0.96693 0.00077304 -0.18528 -0.00014812 0.78166 0.00062492 799.479602279223 803.486405367234 132.92 0.53061 132.92 132.63 133.16 0 97 24 7 0 0 0 2.9707E-07 2 86929 106.62 106.62 1 1.2872 1.2995 0 5529900 2548100 2981800 23632 1070 8907 9115 37030;37031 37031 LSDLVNTAILIALNK 15 1 0 Unmodified _LSDLVNTAILIALNK_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.9809 2 799.479805 1596.94506 70274.59 1.084 0.00086661 -0.2114 -0.00016901 0.87257 0.0006976 799.47975291793 803.486294777371 132.46 0.44821 132.46 132.27 132.72 0 93 25 5 0 0 0 0.00017997 1 88710 77.64 77.64 1 1.3061 1.3155 0 7191000 2550600 4640400 23633 1070 8907 9115 37032 37032 LSDLVNTAILIALNKR 16 1 1 Unmodified _LSDLVNTAILIALNKR_ 0 0 1 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.6905 3 585.355999 1753.04617 77289.3 1.1002 0.00064402 -0.098185 -5.7473E-05 1.002 0.00058655 585.35585443208 591.363581749796 134.19 0.20082 134.19 134.08 134.28 0 37 9 5 0 0 0 0.0001055 2 81853 49.595 49.595 1 1.4218 1.2257 0 2646100 840070 1806100 23634 1070 8908 9116 37033;37034 37034 LSDPELGVEEEPFHTIMK 18 1 0 Oxidation (M) _LSDPELGVEEEPFHTIM(ox)K_ LSDPELGVEEEPFHTIM(1)K LSDPELGVEEEPFHTIM(58.3)K 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.6737 3 696.338234 2085.99287 71677.44 0.60623 0.00042214 0.15672 0.00010913 0.76295 0.00053127 696.338882373253 699.343985471257 88.279 0.74442 88.279 87.888 88.632 0 322 59 8 0 0 0 1.2455E-05 2 53095 58.304 56.138 1 1.9795 2.2337 0 78736000 24896000 53841000 23635 908 8909 9117 37035;37036 37036 742 LSDPELGVEEEPFHTIMK 18 1 0 Oxidation (M) _LSDPELGVEEEPFHTIM(ox)K_ LSDPELGVEEEPFHTIM(1)K LSDPELGVEEEPFHTIM(89.47)K 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.3403 3 696.338234 2085.99287 71414.57 0.68917 0.0004799 0.097638 6.7989E-05 0.78681 0.00054789 696.338772284985 699.343836964058 87.278 0.68068 87.278 86.966 87.647 0 324 55 8 0 0 0 2.5853E-08 2 53677 89.468 89.468 1 1.8762 2.1041 0 54921000 23154000 31767000 23636 908 8909 9117 37037;37038 37038 742 LSDYDSSEEAIR 12 0 1 Unmodified _LSDYDSSEEAIR_ 0 0 0 Q6PGP7;D6RCE2 Q6PGP7 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8199 2 692.814978 1383.6154 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.347 1 42.347 41.847 42.847 0 0 0 0 5.0482E-07 1 22818 104.22 43.785 1 23637 1855 8910 9118 37039 37039 LSEDEETVYNVFFAR 15 0 1 Unmodified _LSEDEETVYNVFFAR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 909.9316 2 909.930874 1817.84719 64754.31 0.60616 0.00055156 0.039397 3.5849E-05 0.64556 0.00058741 910.432615531321 914.935455183814 116.76 0.59241 116.76 116.5 117.09 -7.6294E-06 208 39 8 0 0 0 4.1688E-07 2 74520 125.22 125.22 1 0.65591 0.68334 0 21224000 14020000 7204000 23638 44 8911 9119 37040;37041 37040 LSEDEETVYNVFFAR 15 0 1 Unmodified _LSEDEETVYNVFFAR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 909.9315 2 909.930874 1817.84719 65091.26 0.73076 0.00066494 0.080128 7.2911E-05 0.81089 0.00073785 910.432433350002 914.935091925785 116.28 0.5356 116.28 116.01 116.55 0 183 33 8 0 0 0 4.7863E-10 3 75997 134.13 121.78 1 0.71547 0.75746 0 23697000 13780000 9916800 23639 44 8911 9119 37042;37043;37044 37043 LSEDEETVYNVFFAR 15 0 1 Unmodified _LSEDEETVYNVFFAR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 915.4383 2 909.930874 1817.84719 NaN NaN NaN 0.054664 4.9741E-05 NaN NaN NaN NaN 128.49 0.48206 128.49 128.26 128.74 0 0 0 0 0.010064 1 77517 51.013 45.168 1 NaN NaN 0 4587400 0 4587400 23640 44 8911 9119 37045 37045 LSEDEETVYNVFFAR 15 0 1 Unmodified _LSEDEETVYNVFFAR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 915.4368 2 909.930874 1817.84719 NaN NaN NaN 0.099337 9.039E-05 NaN NaN NaN NaN 128.3 0.59015 128.3 128.04 128.63 0 0 0 0 0.00083837 1 76534 67.385 62.001 1 NaN NaN 0 5796900 0 5796900 23641 44 8911 9119 37046 37046 LSEELQGLDQLQLDNDVLR 19 0 1 Unmodified _LSEELQGLDQLQLDNDVLR_ 0 0 0 B1AQP1;A0A0S2Z4U5;P22415 B1AQP1 B1AQP1 USF1 Upstream stimulatory factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1099.5706 2 1099.5686 2197.12264 60128.33 0.28625 0.00031475 0.38584 0.00042426 0.67209 0.00073901 1100.06968259739 1104.57358009504 117.99 0.32677 117.99 117.83 118.16 0 73 22 5 0 0 0 3.9556E-05 3 77516 68.83 68.83 1 0.55891 0.55326 0 12322000 6761500 5560400 23642 569 8912 9120 37047;37048;37049 37048 LSEELSGGR 9 0 1 Unmodified _LSEELSGGR_ 0 0 0 A0A024RAI1;P61158;B4DT29;B4DXW1;B4DTI0;Q59FV6;B3KM55;B4E1U3;Q59GD5;B7Z9W3;Q9P1U1 A0A024RAI1 A0A024RAI1 ACTR3;ACTR3B Actin-related protein 3;Actin-related protein 3B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.2478 2 474.243264 946.471974 NaN NaN NaN 0.70602 0.00033482 NaN NaN NaN NaN 26.379 0.30052 26.379 26.215 26.516 0 0 0 0 0.037075 1 11842 51.193 7.0759 1 NaN NaN 0 6073700 0 6073700 23643 304 8913 9121 37050 37050 LSEIPLTLHSVSELVR 16 0 1 Unmodified _LSEIPLTLHSVSELVR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.6801 3 598.343759 1792.00945 77619.59 0.90956 0.00054423 -0.16725 -0.00010008 0.7423 0.00044415 598.678306158241 601.679767703958 113.74 1.063 113.74 113.48 114.55 0 229 76 6 0 0 0 3.3434E-07 3 72388 96.673 96.673 1 22.792 25.356 0 76858000 2939800 73918000 23644 2103 8914 9122 37051;37052;37053 37052 LSEIPLTLHSVSELVR 16 0 1 Unmodified _LSEIPLTLHSVSELVR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.015 3 598.343759 1792.00945 77782.6 0.73551 0.00044009 -0.032211 -1.9273E-05 0.7033 0.00042081 598.677810385513 601.679841442342 112.93 0.94231 112.93 112.54 113.48 0 251 64 7 0 0 0 5.5795E-09 1 72997 102.38 102.38 1 31.129 35.712 0 80948000 3930700 77017000 23645 2103 8914 9122 37054 37054 LSEIPLTLHSVSELVR 16 0 1 Unmodified _LSEIPLTLHSVSELVR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.6797 3 598.343759 1792.00945 77806.08 0.71014 0.00042491 0.0409 2.4472E-05 0.75104 0.00044938 598.678182435832 601.679930904877 124.51 0.83076 124.51 124.19 125.02 0 185 35 9 0 0 0 7.7315E-05 1 74507 57.499 57.499 1 18.158 15.638 0 59893000 2704700 57188000 23646 2103 8914 9122 37055 37055 LSEIPLTLHSVSELVR 16 0 1 Unmodified _LSEIPLTLHSVSELVR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.3448 3 598.343759 1792.00945 77698.23 0.76958 0.00046047 -0.066649 -3.9879E-05 0.70293 0.00042059 598.344477556459 601.679865998427 124.36 1.1255 124.36 124 125.13 0 219 50 10 0 0 0 0.017342 1 73499 22.475 22.475 1 22.631 19.753 0 86580000 3777600 82803000 23647 2103 8914 9122 37056 37056 LSEIVTLAK 9 1 0 Unmodified _LSEIVTLAK_ 0 0 0 B7ZAF6;E5KS55;B7Z9S6;B4DY87;B4DRV2;E5KS60;Q6N0B1;Q9P2R7;A0A0U1RQL1;Q9Y4T0;A0A0S2Z511 B7ZAF6 B7ZAF6 SUCLA2;DKFZp686D0880;DKFZp564P2062 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.3073 2 487.30005 972.585547 88787.41 0.15339 7.4748E-05 0.50671 0.00024692 0.66011 0.00032167 487.300421224739 491.307233373329 72.225 0.34158 72.225 72.06 72.402 0 79 26 5 0 0 0 0.00022612 1 42248 105.57 72.017 1 1.5486 1.5869 0 10583000 4607100 5976400 23648 1109 8915 9123 37057 37057 LSELEAALQR 10 0 1 Unmodified _LSELEAALQR_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;CON__Q9H552;CON__REFSEQ:XP_092267 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.319 2 565.31422 1128.61389 81037.01 0.36999 0.00020916 0.1302 7.3602E-05 0.50019 0.00028277 565.314134754393 570.318517037964 72.551 1.2915 72.551 72.075 73.366 0 484 102 8 0 0 0 3.2668E-12 2 42292 146.69 98.132 1 1.0746 1.2151 0 103330000 49847000 53478000 + 23649 1156 8916 9124 37058;37059 37058 LSELEAALQR 10 0 1 Unmodified _LSELEAALQR_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;CON__Q9H552;CON__REFSEQ:XP_092267 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.3182 2 565.31422 1128.61389 80952.93 0.44692 0.00025265 -0.11786 -6.6629E-05 0.32906 0.00018602 565.314027795218 570.3184208468 71.144 1.1692 71.144 70.799 71.968 0 431 90 7 0 0 0 4.5935E-16 2 42572 152.34 99.938 1 1.085 1.2374 0 139790000 67954000 71835000 + 23650 1156 8916 9124 37060;37061 37060 LSELEAALQR 10 0 1 Unmodified _LSELEAALQR_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;CON__Q9H552;CON__REFSEQ:XP_092267 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.3187 2 565.31422 1128.61389 82522.84 0.48186 0.0002724 0.18438 0.00010423 0.66624 0.00037663 565.31427987536 570.318391998184 82.899 1.3275 82.899 82.507 83.835 0 412 86 9 0 0 0 0.00050835 2 45018 85.731 54.657 1 1.9053 1.555 0 14571000 4939200 9632100 + 23651 1156 8916 9124 37062;37063 37062 LSELEAALQR 10 0 1 Unmodified _LSELEAALQR_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931;CON__Q9H552;CON__REFSEQ:XP_092267 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.3183 2 565.31422 1128.61389 81767.45 0.54524 0.00030823 -0.12438 -7.0316E-05 0.42086 0.00023792 565.314096748197 570.318311801548 83.154 1.264 83.154 82.772 84.036 0 337 80 8 0 0 0 4.3192E-07 2 44305 112.41 65.417 1 1.9222 1.5525 0 11429000 3795000 7634300 + 23652 1156 8916 9124 37064;37065 37064 LSELEPGTGDLR 12 0 1 Unmodified _LSELEPGTGDLR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.3192 2 643.832974 1285.6514 77790.4 0.8513 0.0005481 0.56081 0.00036107 1.4121 0.00090917 643.832836669395 648.837351119939 63.84 0.86279 63.84 63.459 64.322 -3.8147E-06 266 79 6 0 0 0 0.0054765 1 36714 75.387 17.529 1 3.0982 3.2093 0 20469000 5112900 15356000 23653 397;1622 8917 9125 37066 37066 LSELEPGTGDLR 12 0 1 Unmodified _LSELEPGTGDLR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.8333 2 643.832974 1285.6514 75544.71 0.5529 0.00035598 0.26286 0.00016924 0.81577 0.00052522 644.333856597624 648.837414200826 62.844 0.8273 62.844 62.396 63.223 3.8147E-06 254 73 6 0 0 0 0.00022516 2 36802 83.862 18.637 1 2.6149 2.8142 0 25759000 7982700 17776000 23654 397;1622 8917 9125 37067;37068 37068 LSELLPEEVEAEVK 14 1 0 Unmodified _LSELLPEEVEAEVK_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.9225 2 792.921986 1583.82942 68477.09 0.80462 0.000638 0.091503 7.2555E-05 0.89612 0.00071056 792.922136381718 796.928909398074 105.26 1.1539 105.26 104.71 105.86 0 616 90 11 0 0 0 2.7399E-09 3 64998 115.33 115.33 1 0.77889 0.91986 0 375450000 212340000 163110000 23655 2129 8918 9126 37069;37070;37071 37070 LSELLPEEVEAEVK 14 1 0 Unmodified _LSELLPEEVEAEVK_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.9291 2 792.921986 1583.82942 68590.5 0.9623 0.00076303 0.14082 0.00011166 1.1031 0.00087469 792.922071633987 796.929123522391 104.67 1.1137 104.67 104.25 105.36 7.6294E-06 592 87 11 0 0 0 1.1777E-09 4 66129 121.02 121.02 1 0.76742 0.9032 0 406180000 231560000 174620000 23656 2129 8918 9126 37072;37073;37074;37075 37073 LSELLPEEVEAEVK 14 1 0 Unmodified _LSELLPEEVEAEVK_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 796.931 2 792.921986 1583.82942 68574.64 0.51609 0.00040922 0.045947 3.6433E-05 0.56204 0.00044565 792.922071686584 796.929031048344 117.11 1.8027 117.11 116.69 118.49 -7.6294E-06 477 76 10 0 0 0 3.4823E-06 3 68758 102.4 102.4 1 1.0375 0.90219 0 144070000 72145000 71922000 23657 2129 8918 9126 37076;37077;37078 37076 LSELLPEEVEAEVK 14 1 0 Unmodified _LSELLPEEVEAEVK_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.9225 2 792.921986 1583.82942 68884.16 0.74358 0.0005896 -0.019456 -1.5427E-05 0.72412 0.00057417 792.921975382122 796.928992061485 116.9 1.9269 116.9 116.59 118.52 0 460 89 10 0 0 0 7.5053E-05 5 67770 89.266 89.266 1 1.0099 0.86788 0 154660000 75653000 79005000 23658 2129 8918 9126 37079;37080;37081;37082;37083 37080 LSELLR 6 0 1 Unmodified _LSELLR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF9;Q504U7;Q05BW6;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q92538 B4DMA2;K9JA46;Q92538 B4DMA2 HSP90AB1;HSP90Af;GBF1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha;Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.7264 2 365.726521 729.438489 98572.73 0.20957 7.6644E-05 -0.076337 -2.7919E-05 0.13323 4.8725E-05 365.72644298087 370.730564755423 47.666 1.2622 47.666 47.174 48.436 0 402 109 6 0 0 0 0.040187 1 25679 107.65 16.819 1 2.1276 2.5156 0 263520000 86089000 177430000 23659 379;1348;1947 8919 9127 37084 37084 LSELLR 6 0 1 Unmodified _LSELLR_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF9;Q504U7;Q05BW6;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7;Q92538 B4DMA2;K9JA46;Q92538 B4DMA2 HSP90AB1;HSP90Af;GBF1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha;Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 365.7268 2 365.726521 729.438489 98035.33 0.32022 0.00011711 -0.0024375 -8.9145E-07 0.31778 0.00011622 365.726436764649 370.730609129601 46.605 1.3433 46.605 46.173 47.517 0 436 106 6 0 0 0 0.035157 1 25623 115.83 27.624 1 2.2278 2.5873 0 351500000 103180000 248320000 23660 379;1348;1947 8919 9127 37085 37085 LSEMEAYLENIEK 13 1 0 Unmodified _LSEMEAYLENIEK_ 0 0 0 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.8878 2 784.879264 1567.74397 68447.93 0.54297 0.00042617 0.21746 0.00017068 0.76043 0.00059685 784.879370637168 788.886578997098 117.78 0.53579 117.78 117.56 118.09 0 109 25 6 0 0 0 0.00013155 2 68561 79.82 70.133 1 1.3258 1.0394 0 3786000 1578700 2207300 23661 924 8920 9128 37086;37087 37086 LSENVIDR 8 0 1 Unmodified _LSENVIDR_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4;F8WD73 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.2582 2 473.253631 944.49271 86341.66 -0.021117 -9.9939E-06 0.060864 2.8804E-05 0.039747 1.881E-05 473.253744868453 478.257787718847 37.53 0.60322 37.53 37.304 37.908 0 207 48 6 0 0 0 0.0014375 2 19506 109.01 39.014 1 1.1506 1.3109 0 104140000 47717000 56421000 23662 664 8921 9129 37088;37089 37089 LSENVIDR 8 0 1 Unmodified _LSENVIDR_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4;F8WD73 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.2578 2 473.253631 944.49271 87205.91 0.21667 0.00010254 0.084951 4.0203E-05 0.30162 0.00014274 473.25370275632 478.257649274223 43.903 0.39906 43.903 43.724 44.123 0 127 29 5 0 0 0 0.001623 2 20799 107.29 46.496 1 2.0599 1.7369 0 4713700 1554900 3158800 23663 664 8921 9129 37090;37091 37091 LSENVIDR 8 0 1 Unmodified _LSENVIDR_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4;F8WD73 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.2579 2 473.253631 944.49271 88016.27 0.32851 0.00015547 -0.13968 -6.6105E-05 0.18883 8.9362E-05 473.253853643027 478.257472011316 44.058 0.51365 44.058 43.778 44.292 0 134 34 5 0 0 0 0.0051683 2 20279 91.318 32.337 1 1.8262 1.615 0 4002100 1317500 2684600 23664 664 8921 9129 37092;37093 37092 LSEQEELK 8 1 0 Unmodified _LSEQEELK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2546 2 488.253297 974.492041 83360.72 0.28679 0.00014002 0.1274 6.2205E-05 0.41419 0.00020223 488.25334431404 492.260541078758 25.99 0.31637 25.99 25.78 26.096 1.9073E-06 49 15 5 0 0 0 0.0076818 1 11535 81.89 32.3 1 0.8496 0.87691 0 17275000 8707200 8568000 23665 684 8922 9130 37094 37094 LSEQEELK 8 1 0 Unmodified _LSEQEELK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2602 2 488.253297 974.492041 84909.12 0.50959 0.00024881 -1.3227 -0.00064581 -0.81311 -0.000397 488.252677528585 492.26057533817 25.636 0.31816 25.636 25.441 25.759 0 59 16 7 0 0 0 0.0022722 1 11253 101.28 51.694 1 1.1568 1.2282 0 20505000 11411000 9093500 23666 684 8922 9130 37095 37095 LSEQELQFR 9 0 1 Unmodified _LSEQELQFR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.3026 2 575.29857 1148.58259 80874.76 0.34725 0.00019977 0.23594 0.00013574 0.58319 0.00033551 575.298599185148 580.302922303039 64.656 0.85725 64.656 64.281 65.138 7.6294E-06 394 76 8 0 0 0 0.00080518 2 37066 94.114 46.402 1 0.9697 1.0782 0 75027000 38417000 36610000 23667 1774;1029;1128 8923 9131 37096;37097 37097 LSEQELQFR 9 0 1 Unmodified _LSEQELQFR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.2988 2 575.29857 1148.58259 NaN NaN NaN 0.44035 0.00025333 NaN NaN NaN NaN 63.581 0.90522 63.581 63.122 64.027 0 0 0 0 0.00010359 1 37218 99.7 48.071 1 NaN NaN 0 38499000 38499000 0 23668 1774;1029;1128 8923 9131 37098 37098 LSEQELQFR 9 0 1 Unmodified _LSEQELQFR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.3036 2 575.29857 1148.58259 80751.45 0.5748 0.00033068 -0.24736 -0.00014231 0.32744 0.00018838 575.298809002378 580.302951944377 74.752 1.0651 74.752 74.367 75.432 0 232 76 6 0 0 0 0.019545 1 39624 51.066 24.682 1 1.9298 1.6223 0 4397300 1428300 2969000 23669 1774;1029;1128 8923 9131 37099 37099 LSESQLSFR 9 0 1 Unmodified _LSESQLSFR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.7795 2 533.780013 1065.54547 84647.95 0.91827 0.00049015 0.57324 0.00030598 1.4915 0.00079613 533.779760738329 538.784331871042 60.401 0.50725 60.401 60.15 60.657 0 194 46 6 0 0 0 1.0629E-05 1 34483 126.52 63.805 1 1.5344 1.6934 0 55598000 21869000 33730000 23670 571 8924 9132 37100 37100 LSESQLSFR 9 0 1 Unmodified _LSESQLSFR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.7791 2 533.780013 1065.54547 83507.38 0.65269 0.00034839 0.80214 0.00042816 1.4548 0.00077656 533.779812939858 538.78433041449 59.175 0.50399 59.175 58.953 59.457 -3.8147E-06 196 45 7 0 0 0 1.656E-06 1 34379 136.27 71.511 1 1.5005 1.7403 0 65347000 26942000 38405000 23671 571 8924 9132 37101 37101 LSESQLSFR 9 0 1 Unmodified _LSESQLSFR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.7849 2 533.780013 1065.54547 84890.85 0.23829 0.0001272 0.47299 0.00025247 0.71128 0.00037967 533.779938235423 538.78444296675 70.248 0.40317 70.248 70.067 70.471 0 118 28 6 0 0 0 0.0056175 1 36893 66.27 32.474 1 0.9326 0.79491 0 5547700 2558500 2989200 23672 571 8924 9132 37102 37102 LSESQLSFR 9 0 1 Unmodified _LSESQLSFR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.7848 2 533.780013 1065.54547 84381.33 0.16079 8.5828E-05 0.73809 0.00039398 0.89888 0.0004798 533.780044514622 538.784629615468 70.754 0.44099 70.754 70.515 70.956 7.6294E-06 139 36 6 0 0 0 0.0010522 1 36386 90.657 29.897 1 0.91489 0.7606 0 5042100 2540100 2502000 23673 571 8924 9132 37103 37103 LSESVLSPPCFVR 13 0 1 Unmodified _LSESVLSPPCFVR_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;F5H2X1;B7Z842;H3BUV0;H3BTM1;H3BRA2;H3BQD1 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.8924 2 745.887226 1489.7599 NaN NaN NaN -0.034356 -2.5626E-05 NaN NaN NaN NaN 102.23 0.56255 102.23 101.97 102.53 0 0 0 0 0.015482 1 62945 50.292 25.501 1 NaN NaN 0 5143400 0 5143400 23674 1954 8925 9133 37104 37104 LSESVLSPPCFVR 13 0 1 Unmodified _LSESVLSPPCFVR_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;F5H2X1;B7Z842;H3BUV0;H3BTM1;H3BRA2;H3BQD1 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.8898 2 745.887226 1489.7599 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.43 1 101.43 100.93 101.93 0 0 0 0 0.0047294 1 63863 59.426 33.989 1 23675 1954 8925 9133 37105 37105 LSEVLQAVTDHDIPQQLVER 20 0 1 Unmodified _LSEVLQAVTDHDIPQQLVER_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.4091 3 764.072768 2289.19647 70447.45 0.71817 0.00054873 0.78206 0.00059755 1.5002 0.0011463 764.407519422698 767.410644464698 107.7 0.82526 107.7 107.38 108.2 0 295 62 8 0 0 0 1.1361E-18 2 67016 123.43 123.43 1 0.82719 0.89529 0 49222000 32857000 16366000 23676 1954 8926 9134 37106;37107 37106 LSEVLQAVTDHDIPQQLVER 20 0 1 Unmodified _LSEVLQAVTDHDIPQQLVER_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.4126 3 764.072768 2289.19647 69372.19 0.71664 0.00054756 0.75797 0.00057915 1.4746 0.0011267 764.407496131696 767.409899240588 107.06 0.5119 107.06 106.79 107.3 0 205 35 9 0 0 0 5.7147E-07 2 68199 71.309 71.309 1 0.54323 0.59972 0 41636000 26917000 14719000 23677 1954 8926 9134 37108;37109 37109 LSEVLQAVTDHDIPQQLVER 20 0 1 Unmodified _LSEVLQAVTDHDIPQQLVER_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.0738 3 764.072768 2289.19647 70249.63 0.7716 0.00058955 0.6832 0.00052202 1.4548 0.0011116 764.407770363314 767.744190670286 118.57 0.45436 118.57 118.38 118.83 0 76 22 5 0 0 0 0.0015406 1 70010 28.813 28.813 1 0.96539 0.8127 0 27677000 14268000 13409000 23678 1954 8926 9134 37110 37110 LSEVLQAVTDHDIPQQLVER 20 0 1 Unmodified _LSEVLQAVTDHDIPQQLVER_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 764.4091 3 764.072768 2289.19647 69970.08 0.83228 0.00063593 0.96539 0.00073763 1.7977 0.0013736 764.408105983469 767.744258630169 118.34 0.45789 118.34 118.13 118.59 -7.6294E-06 92 21 6 0 0 0 2.7455E-09 1 69011 88.551 88.551 1 0.68275 0.55297 0 10408000 5666000 4741900 23679 1954 8926 9134 37111 37111 LSEVTFRPLFFK 12 1 1 Unmodified _LSEVTFRPLFFK_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.2901 3 495.281772 1482.82349 86429.77 0.41613 0.0002061 0.12355 6.1191E-05 0.53968 0.00026729 495.281892549037 501.289329765492 107.75 1.145 107.75 107.2 108.34 0 454 86 9 0 0 0 0.038949 1 66967 27.005 15.422 1 0.99081 1.1732 0 40266000 20673000 19593000 23680 897 8927 9135 37112 37112 LSEVTFRPLFFK 12 1 1 Unmodified _LSEVTFRPLFFK_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.4191 2 742.41902 1482.82349 73433.74 0.80258 0.00059585 0.010092 7.4922E-06 0.81267 0.00060335 742.418807474083 751.430027578124 107.68 0.63914 107.68 107.44 108.08 0 117 47 5 0 0 0 0.0029204 1 66993 51.268 46.802 1 0.86301 0.94909 0 8660900 5370300 3290600 23681 897 8927 9135 37113 37113 LSEVTFRPLFFK 12 1 1 Unmodified _LSEVTFRPLFFK_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2895 3 495.281772 1482.82349 86908.69 0.45764 0.00022666 0.080309 3.9776E-05 0.53795 0.00026644 495.281863290915 501.289324754002 106.6 1.0404 106.6 106.08 107.12 0 452 77 8 0 0 0 0.00023724 2 67716 69.864 60.33 1 0.97223 1.1426 0 64745000 33374000 31371000 23682 897 8927 9135 37114;37115 37114 LSEVTFRPLFFK 12 1 1 Unmodified _LSEVTFRPLFFK_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.4202 2 742.41902 1482.82349 74560.24 0.86597 0.00064291 -0.43057 -0.00031967 0.4354 0.00032325 742.418638859901 751.42941806788 106.57 0.59747 106.57 106.25 106.85 0 133 44 4 0 0 0 0.00069276 1 67767 100.88 100.88 1 1.0166 1.1292 0 10360000 5537800 4822700 23683 897 8927 9135 37116 37116 LSEVTFRPLFFK 12 1 1 Unmodified _LSEVTFRPLFFK_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.2892 3 495.281772 1482.82349 85688.61 0.13672 6.7714E-05 0.22699 0.00011242 0.36371 0.00018014 495.281960463325 501.289404909191 117.43 0.77235 117.43 117.21 117.98 7.6294E-06 187 36 9 0 0 0 0.009894 2 68227 38.674 26.313 1 1.0904 0.92514 0 19993000 9806500 10186000 23684 897 8927 9135 37117;37118 37117 LSFAVPFR 8 0 1 Unmodified _LSFAVPFR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.7685 2 468.76872 935.522887 89101.26 0.17722 8.3073E-05 0.089057 4.1747E-05 0.26627 0.00012482 468.768681945251 473.772786422245 104.07 0.78694 104.07 103.73 104.52 0 234 65 5 0 0 0 0.0092293 2 64083 84.244 84.244 1 0.62514 0.63647 0 18531000 11851000 6679400 23685 1665 8928 9136 37119;37120 37119 LSFAVPFR 8 0 1 Unmodified _LSFAVPFR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.7725 2 468.76872 935.522887 89096.77 0.32088 0.00015042 -0.083734 -3.9252E-05 0.23714 0.00011116 468.768611379099 473.772782958157 103.17 0.69202 103.17 102.95 103.64 0 198 55 5 0 0 0 0.010479 1 65127 72.138 51.583 1 0.67392 0.72804 0 26679000 14492000 12187000 23686 1665 8928 9136 37121 37121 LSFAVPFR 8 0 1 Unmodified _LSFAVPFR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 468.7694 2 468.76872 935.522887 89731.85 0.65292 0.00030607 0.042959 2.0138E-05 0.69588 0.0003262 468.768577466968 473.772875366087 115.9 0.44332 115.9 115.67 116.12 0 72 17 6 0 0 0 0.0092293 2 67978 84.244 70.468 1 0.33408 0.28723 0 6692800 4738000 1954800 23687 1665 8928 9136 37122;37123 37122 LSFAVPFR 8 0 1 Unmodified _LSFAVPFR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.7691 2 468.76872 935.522887 89800.62 0.50535 0.00023689 -0.0064462 -3.0218E-06 0.4989 0.00023387 468.768622971323 473.772732507315 115.72 0.46745 115.72 115.45 115.92 0 77 21 5 0 0 0 0.032472 2 66840 56.122 56.122 1 0.32453 0.26946 0 5857400 4390200 1467200 23688 1665 8928 9136 37124;37125 37124 LSFFFDFR 8 0 1 Unmodified _LSFFFDFR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.7761 2 539.77146 1077.52837 83869.45 0.90696 0.00048955 -0.091844 -4.9575E-05 0.81511 0.00043998 539.771335059176 544.775421739367 124.12 0.33437 124.12 123.9 124.24 0 42 22 4 0 0 0 0.027337 1 82603 53.968 30.013 1 1.6216 1.7592 0 2561300 1046800 1514400 23689 587 8929 9137 37126 37126 LSFHQTQVSQR 11 0 1 Unmodified _LSFHQTQVSQR_ 0 0 0 D3DVL7;B4DU42;Q969Z0;C9IZN7;B3KRS4;B3KMT3 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.8487 2 665.84675 1329.67895 77873.1 1.146 0.00076307 -0.273 -0.00018177 0.87301 0.00058129 666.347952560022 670.850393641706 28.623 0.20191 28.623 28.498 28.7 0 39 11 6 0 0 0 0.0049052 2 13567 57.174 47.736 1 1.5006 1.5744 0 12067000 5383600 6683800 23690 1036 8930 9138 37127;37128 37128 LSFHQTQVSQR 11 0 1 Unmodified _LSFHQTQVSQR_ 0 0 0 D3DVL7;B4DU42;Q969Z0;C9IZN7;B3KRS4;B3KMT3 D3DVL7 D3DVL7 TBRG4 Protein TBRG4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8506 2 665.84675 1329.67895 NaN NaN NaN -0.33519 -0.00022319 NaN NaN NaN NaN 27.742 0.18939 27.742 27.628 27.818 0 0 0 0 0.0048066 1 13021 65.695 38.391 1 NaN NaN 0 5064400 0 5064400 23691 1036 8930 9138 37129 37129 LSFLPR 6 0 1 Unmodified _LSFLPR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 366.7237 2 366.723781 731.43301 100309.2 -0.17601 -6.4548E-05 0.32075 0.00011763 0.14474 5.3078E-05 366.723805138754 371.727889718913 72.032 0.85201 72.032 71.852 72.704 0 257 77 6 0 0 0 0.034267 1 43187 113.07 0 1 0.85864 0.97689 0 125450000 67114000 58338000 23692 1726 8931 9139 37130 37130 LSFLYLITGNLEK 13 1 0 Unmodified _LSFLYLITGNLEK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.9371 2 755.929417 1509.84428 NaN NaN NaN 0.7709 0.00058275 NaN NaN NaN NaN 133.41 0.35339 133.41 133.29 133.64 0 0 0 0 1.1302E-60 1 87352 190.57 147.29 1 NaN NaN 0 18131000 0 18131000 23693 1607 8932 9140 37131 37131 LSFLYLITGNLEK 13 1 0 Unmodified _LSFLYLITGNLEK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.9299 2 755.929417 1509.84428 73856.23 0.58454 0.00044187 0.26767 0.00020234 0.85221 0.00064421 755.929397992902 759.936484453691 133.4 0.57321 133.4 133 133.57 0 63 16 7 0 0 0 9.7672E-09 2 89379 115.33 115.33 1 1.565 1.594 0 30724000 9009200 21715000 23694 1607 8932 9140 37132;37133 37133 LSFSGLR 7 0 1 Unmodified _LSFSGLR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 395.2278 2 390.224146 778.433738 96568.36 0.17812 6.9505E-05 -0.14061 -5.4869E-05 0.037507 1.4636E-05 390.224053638401 395.228106801425 64.495 1.0456 64.495 63.961 65.006 0 303 93 5 0 0 0 0.037563 1 38060 60.788 9.822 1 2.1238 2.3388 0 41071000 14438000 26632000 23695 1754 8933 9141 37134 37134 LSFSHIEK 8 1 0 Unmodified _LSFSHIEK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.7607 2 480.761092 959.507631 85509.7 0.57785 0.00027781 -0.46103 -0.00022164 0.11683 5.6167E-05 480.761207926677 484.767998079631 36.521 0.7414 36.521 36.143 36.884 0 270 57 8 0 0 0 0.012318 1 18711 67.897 29.923 1 1.3764 1.5997 0 232690000 92909000 139780000 23696 1914 8934 9142 37135 37135 LSFSHIEK 8 1 0 Unmodified _LSFSHIEK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.7611 2 480.761092 959.507631 86773.76 0.16212 7.794E-05 -0.37078 -0.00017826 -0.20866 -0.00010032 480.760483377863 484.768045383952 43.057 0.84618 43.057 42.773 43.619 0 249 55 8 0 0 0 0.05596 1 20141 41.575 18.555 1 1.5372 1.2152 0 18204000 7337700 10866000 23697 1914 8934 9142 37136 37136 LSFYETGEIPR 11 0 1 Unmodified _LSFYETGEIPR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.3374 2 656.33261 1310.65067 73773.78 0.96206 0.00063143 0.15833 0.00010392 1.1204 0.00073535 656.332735984872 661.33670702734 86.579 1.0417 86.579 86.042 87.083 0 503 77 9 0 0 0 2.7331E-05 3 52399 102.06 67.675 1 0.70871 0.8379 0 260230000 155030000 105200000 23698 785 8935 9143 37137;37138;37139 37138 LSFYETGEIPR 11 0 1 Unmodified _LSFYETGEIPR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.3383 2 656.33261 1310.65067 74365.13 0.7963 0.00052264 0.13244 8.6926E-05 0.92874 0.00060956 656.33277614775 661.336767446613 85.624 1.138 85.624 85.039 86.177 0 536 91 9 0 0 0 7.8316E-06 4 53019 109.66 69.312 1 0.756 0.87534 0 280590000 153530000 127060000 23699 785 8935 9143 37140;37141;37142;37143 37142 LSFYETGEIPR 11 0 1 Unmodified _LSFYETGEIPR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.3334 2 656.33261 1310.65067 75286.22 0.76915 0.00050482 0.3771 0.00024751 1.1463 0.00075232 656.332726164964 661.336877505889 99.151 0.87363 99.151 98.857 99.731 -7.6294E-06 312 49 10 0 0 0 0.00026225 2 55909 90.108 72.877 1 0.86555 0.74496 0 53874000 27113000 26761000 23700 785 8935 9143 37144;37145 37145 LSFYETGEIPR 11 0 1 Unmodified _LSFYETGEIPR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.3366 2 656.33261 1310.65067 75432.72 0.62425 0.00040971 0.47113 0.00030922 1.0954 0.00071893 656.332762451563 661.336901494861 99.031 0.74275 99.031 98.785 99.528 7.6294E-06 299 44 10 0 0 0 0.00011828 2 54989 96.342 61.955 1 0.93578 0.8164 0 50379000 25594000 24784000 23701 785 8935 9143 37146;37147 37146 LSFYETGEIPRK 12 1 1 Unmodified _LSFYETGEIPRK_ 0 0 1 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.5969 3 480.589153 1438.74563 87280.77 0.35482 0.00017052 -0.019734 -9.4838E-06 0.33509 0.00016104 480.589224267018 486.596582937572 65.642 0.88667 65.642 65.278 66.164 0 479 82 9 0 0 0 0.0067468 2 37722 43.604 38.904 1 0.76604 0.92188 0 93403000 48634000 44769000 23702 785 8936 9144 37148;37149 37149 LSFYETGEIPRK 12 1 1 Unmodified _LSFYETGEIPRK_ 0 0 1 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.9313 3 480.589153 1438.74563 86832.36 0.16282 7.8249E-05 0.18895 9.0808E-05 0.35177 0.00016906 480.589228376215 486.596721684193 63.9 0.88681 63.9 63.543 64.429 0 447 81 8 0 0 0 0.0013313 2 37436 50.207 46.886 1 0.75467 0.88945 0 101420000 54481000 46936000 23703 785 8936 9144 37150;37151 37151 LSFYETGEIPRK 12 1 1 Unmodified _LSFYETGEIPRK_ 0 0 1 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.3911 2 720.380091 1438.74563 74122.96 0.58258 0.00041968 0.48504 0.00034941 1.0676 0.00076909 720.38130955792 729.391229330225 63.882 0.47391 63.882 63.602 64.076 0 81 43 4 0 0 0 0.0028172 1 37539 60.518 60.518 1 0.89289 1.0102 0 15952000 6391900 9560000 23704 785 8936 9144 37152 37152 LSFYETGEIPRK 12 1 1 Unmodified _LSFYETGEIPRK_ 0 0 1 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.3824 2 720.380091 1438.74563 72015.2 0.74939 0.00053984 0.0018651 1.3436E-06 0.75125 0.00054119 720.380326333106 729.391264048207 75.035 0.66035 75.035 74.74 75.4 0 242 48 8 0 0 0 0.018296 1 39784 48.284 43.833 1 1.0069 0.86185 0 10404000 4756900 5647000 23705 785 8936 9144 37153 37153 LSFYETGEIPRK 12 1 1 Unmodified _LSFYETGEIPRK_ 0 0 1 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.5969 3 480.589153 1438.74563 86916.5 0.26362 0.00012669 0.18747 9.0096E-05 0.45109 0.00021679 480.589340969015 486.596630975372 75.022 1.1036 75.022 74.705 75.808 0 484 80 10 0 0 0 4.5969E-05 1 39825 68.676 65.251 1 0.95511 0.84552 0 47042000 23035000 24007000 23706 785 8936 9144 37154 37154 LSFYETGEIPRK 12 1 1 Unmodified _LSFYETGEIPRK_ 0 0 1 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.5966 3 480.589153 1438.74563 87272.7 0.19498 9.3704E-05 0.26812 0.00012885 0.46309 0.00022256 480.589365827841 486.596672238492 75.27 1.4251 75.27 74.884 76.309 -7.6294E-06 476 99 11 0 0 0 0.028828 1 39056 22.493 22.493 1 1.0406 0.88513 0 34265000 16130000 18135000 23707 785 8936 9144 37155 37155 LSFYETGEIPRK 12 1 1 Unmodified _LSFYETGEIPRK_ 0 0 1 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.3807 2 720.380091 1438.74563 72751.67 0.53703 0.00038687 0.20707 0.00014917 0.74411 0.00053604 720.380640910159 729.39131034409 75.243 0.73583 75.243 74.974 75.71 0 251 53 8 0 0 0 0.0024282 1 39158 66.595 66.595 1 1.0371 0.87338 0 7965000 4137200 3827800 23708 785 8936 9144 37156 37156 LSGEAFDINK 10 1 0 Unmodified _LSGEAFDINK_ 0 0 0 B7ZLC9;Q8TEQ6;Q58EZ8 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.2874 2 547.279846 1092.54514 82898.07 0.64562 0.00035334 1.1541 0.00063163 1.7998 0.00098497 547.280103986056 551.287747147092 57.963 0.55756 57.963 57.732 58.29 3.8147E-06 110 44 4 0 0 0 0.010458 1 32750 53.327 15.241 1 1.7661 1.7401 0 9168500 3456200 5712300 23709 1114 8937 9145 37157 37157 LSGGLGAGSCR 11 0 1 Unmodified _LSGGLGAGSCR_ 0 0 0 CON__Q04695;Q04695;K7EPJ9;B4E2P9 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.7558 2 517.756015 1033.49748 NaN NaN NaN -0.015334 -7.9393E-06 NaN NaN NaN NaN 24.629 0.30513 24.629 24.508 24.813 0 0 0 0 2.8682E-05 1 10338 101.97 77.819 1 NaN NaN 0 10687000 10687000 0 + 23710 1168 8938 9146 37158 37158 LSGGLGAGSCR 11 0 1 Unmodified _LSGGLGAGSCR_ 0 0 0 CON__Q04695;Q04695;K7EPJ9;B4E2P9 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.7561 2 517.756015 1033.49748 NaN NaN NaN 0.053158 2.7523E-05 NaN NaN NaN NaN 24.395 0.33113 24.395 24.22 24.552 0 0 0 0 0.0021492 1 10110 77.379 59.47 1 NaN NaN 0 15128000 15128000 0 + 23711 1168 8938 9146 37159 37159 LSGGLGAGSCR 11 0 1 Unmodified _LSGGLGAGSCR_ 0 0 0 CON__Q04695;Q04695;K7EPJ9;B4E2P9 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.756 2 517.756015 1033.49748 NaN NaN NaN 0.23492 0.00012163 NaN NaN NaN NaN 27.059 0.39915 27.059 26.905 27.304 0 0 0 0 0.049468 1 9864 44.425 34.514 1 NaN NaN 0 1496000 1496000 0 + 23712 1168 8938 9146 37160 37160 LSGLEQPQGALQTR 14 0 1 Unmodified _LSGLEQPQGALQTR_ 0 0 0 Q6RFH5;E9PS41;H0YFP2 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.4092 2 749.404629 1496.79471 70091.38 0.52033 0.00038994 -0.15808 -0.00011846 0.36225 0.00027147 749.404462506481 754.408585155453 62.359 0.62981 62.359 62.195 62.825 0 338 58 8 0 0 0 1.7779E-57 2 35730 196.24 196.24 1 1.0263 1.1522 0 92961000 45717000 47244000 23713 1859 8939 9147 37161;37162 37161 LSGLEQPQGALQTR 14 0 1 Unmodified _LSGLEQPQGALQTR_ 0 0 0 Q6RFH5;E9PS41;H0YFP2 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.4086 2 749.404629 1496.79471 70324.07 0.61392 0.00046008 0.10688 8.0099E-05 0.72081 0.00054018 749.40471561732 754.408748724087 61.552 0.83962 61.552 61.11 61.949 -3.8147E-06 434 78 8 0 0 0 7.6916E-10 2 35862 122.51 122.51 1 0.97528 1.1176 0 83330000 43243000 40087000 23714 1859 8939 9147 37163;37164 37164 LSGLEQPQGALQTR 14 0 1 Unmodified _LSGLEQPQGALQTR_ 0 0 0 Q6RFH5;E9PS41;H0YFP2 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 754.4087 2 749.404629 1496.79471 70174.82 0.60089 0.00045031 -0.30694 -0.00023002 0.29396 0.00022029 749.40438298704 754.408535114708 72.239 0.9453 72.239 71.928 72.874 0 375 73 8 0 0 0 6.2243E-21 2 38035 139.76 139.76 1 1.2841 1.0697 0 22467000 10602000 11865000 23715 1859 8939 9147 37165;37166 37166 LSGLEQPQGALQTR 14 0 1 Unmodified _LSGLEQPQGALQTR_ 0 0 0 Q6RFH5;E9PS41;H0YFP2 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.4089 2 749.404629 1496.79471 70537.08 0.34579 0.00025914 -0.043205 -3.2378E-05 0.30259 0.00022676 749.404555702616 754.408763119545 72.763 0.88931 72.763 72.434 73.324 0 419 71 8 0 0 0 3.001E-14 2 37548 128.28 128.28 1 1.3756 1.1864 0 22461000 9752200 12709000 23716 1859 8939 9147 37167;37168 37168 LSGLNAFDIAEELVK 15 1 0 Unmodified _LSGLNAFDIAEELVK_ 0 0 0 O95983;B3KMA8;K7EIE8;A0A087WT34;A0A087X1H1;A0A0A0MTS6 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.939 2 809.93797 1617.86139 68168.61 0.92598 0.00074998 0.14935 0.00012096 1.0753 0.00087094 809.93787421069 813.945056351008 133.04 0.57628 133.04 132.74 133.32 0 123 22 7 0 0 0 8.5547E-22 2 86910 139.78 139.78 1 0.74473 0.80582 0 36079000 20364000 15716000 23717 1432 8940 9148 37169;37170 37169 LSGLNAFDIAEELVK 15 1 0 Unmodified _LSGLNAFDIAEELVK_ 0 0 0 O95983;B3KMA8;K7EIE8;A0A087WT34;A0A087X1H1;A0A0A0MTS6 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.9388 2 809.93797 1617.86139 68154.66 0.88944 0.00072039 0.048386 3.919E-05 0.93783 0.00075958 809.93796854488 813.945037944359 132.63 0.69188 132.63 132.29 132.98 0 264 39 10 0 0 0 2.0329E-38 3 88837 166.62 166.62 1 0.74111 0.82293 0 49381000 29674000 19707000 23718 1432 8940 9148 37171;37172;37173 37173 LSGSNPYTTVTPQIINSK 18 1 0 Unmodified _LSGSNPYTTVTPQIINSK_ 0 0 0 A0A0S2Z3G9;O43707;Q96BG6;F5GXS2;H7C144 A0A0S2Z3G9 A0A0S2Z3G9 ACTN4 Alpha-actinin-4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 964.5174 2 960.50728 1919.00001 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.829 1 86.829 86.329 87.329 0 0 0 0 0.00046433 1 53526 57.328 46.115 1 23719 548 8941 9149 37174 37174 LSGTLNETLDK 11 1 0 Unmodified _LSGTLNETLDK_ 0 0 0 REV__P46013 REV__P46013 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8174 2 595.816793 1189.61903 NaN NaN NaN -0.52632 -0.00031359 NaN NaN NaN NaN 66.309 4.0373 66.309 65.891 69.928 0 0 0 0 0.0072962 4 38624 62.546 27.101 1 NaN NaN 0 5437300000 5437300000 0 + 23720 2178 8942 9150 37175;37176;37177;37178 37176 LSGTLNETLDK 11 1 0 Unmodified _LSGTLNETLDK_ 0 0 0 REV__P46013 REV__P46013 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8176 2 595.816793 1189.61903 NaN NaN NaN -0.82804 -0.00049336 NaN NaN NaN NaN 65.045 2.9422 65.045 64.581 67.523 0 0 0 0 0.0099065 4 38713 59.245 29.772 1 NaN NaN 0 5532200000 5532200000 0 + 23721 2178 8942 9150 37179;37180;37181;37182 37180 LSGTLNETLDK 11 1 0 Unmodified _LSGTLNETLDK_ 0 0 0 REV__P46013 REV__P46013 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.8184 2 595.816793 1189.61903 NaN NaN NaN 0.36361 0.00021665 NaN NaN NaN NaN 76.195 4.8423 76.195 75.871 80.713 -7.6294E-06 0 0 0 0.0051612 3 40953 65.246 24.978 1 NaN NaN 0 808330000 808330000 0 + 23722 2178 8942 9150 37183;37184;37185 37184 LSGTLNETLDK 11 1 0 Unmodified _LSGTLNETLDK_ 0 0 0 REV__P46013 REV__P46013 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.8188 2 595.816793 1189.61903 NaN NaN NaN 0.32264 0.00019223 NaN NaN NaN NaN 76.41 4.5679 76.41 76.22 80.788 0 0 0 0 0.0099065 4 40864 59.245 26.405 1 NaN NaN 0 798120000 798120000 0 + 23723 2178 8942 9150 37186;37187;37188;37189 37188 LSGVEEELQR 10 0 1 Unmodified _LSGVEEELQR_ 0 0 0 Q6UVJ0;Q495U0;B4DYM7 Q6UVJ0 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.305 2 580.30131 1158.58807 NaN NaN NaN 0.46855 0.0002719 NaN NaN NaN NaN 48.027 0.30001 48.027 47.823 48.123 0 0 0 0 0.0087219 1 26812 64.654 31.276 1 NaN NaN 0 2564400 0 2564400 23724 1862 8943 9151 37190 37190 LSHETVTIELK 11 1 0 Unmodified _LSHETVTIELK_ 0 0 0 P62314;J3QLR7 P62314 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3564 2 635.356085 1268.69762 79231.37 0.64473 0.00040963 0.15996 0.00010163 0.80469 0.00051126 635.356109663282 639.363578235318 55.76 0.24224 55.76 55.636 55.878 0 48 17 4 0 0 0 1.6756E-12 1 31396 175.07 81.906 1 0.86752 0.90356 0 11631000 6002800 5627700 23725 1644 8944 9152 37191 37191 LSHETVTIELK 11 1 0 Unmodified _LSHETVTIELK_ 0 0 0 P62314;J3QLR7 P62314 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.8576 2 635.356085 1268.69762 76397 0.65315 0.00041499 0.20384 0.00012951 0.857 0.0005445 635.355816383074 639.363687336192 54.398 0.36802 54.398 54.222 54.59 0 76 29 4 0 0 0 2.4599E-13 2 31035 175.93 114.26 1 0.84402 0.89007 0 19930000 10375000 9554900 23726 1644 8944 9152 37192;37193 37192 LSHETVTIELK 11 1 0 Unmodified _LSHETVTIELK_ 0 0 0 P62314;J3QLR7 P62314 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 423.9063 3 423.906482 1268.69762 93648.34 -0.21527 -9.1255E-05 0.70313 0.00029806 0.48786 0.00020681 423.90660710769 426.577993139258 64.932 0.55258 64.932 64.718 65.271 0 242 42 8 0 0 0 0.0096327 2 33547 38.238 22.866 1 0.72112 0.56184 0 12267000 6135500 6131700 23727 1644 8944 9152 37194;37195 37195 LSHETVTIELK 11 1 0 Unmodified _LSHETVTIELK_ 0 0 0 P62314;J3QLR7 P62314 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.357 2 635.356085 1268.69762 NaN NaN NaN 0.2465 0.00015662 NaN NaN NaN NaN 64.945 0.34739 64.945 64.824 65.171 0 0 0 0 0.01098 1 33576 57.888 27.324 1 NaN NaN 0 1040300 1040300 0 23728 1644 8944 9152 37196 37196 LSHETVTIELK 11 1 0 Unmodified _LSHETVTIELK_ 0 0 0 P62314;J3QLR7 P62314 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.364 2 635.356085 1268.69762 76697.62 0.3999 0.00025408 0.04094 2.6011E-05 0.44084 0.00028009 635.355724507601 639.363284267751 65.234 0.37956 65.234 65.014 65.394 0 102 25 6 0 0 0 0.001471 2 32895 82.029 59.387 1 0.91219 0.7187 0 3249400 1559300 1690100 23729 1644 8944 9152 37197;37198 37198 LSHPLLEQLLPALR 14 0 1 Unmodified _LSHPLLEQLLPALR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.3251 3 533.99088 1598.95081 83077.48 0.57138 0.00030511 0.062262 3.3247E-05 0.63364 0.00033836 534.325217174263 537.326895193405 117.73 1.0196 117.73 117.28 118.3 0 386 64 8 0 0 0 2.7046E-05 2 75176 69.716 69.716 1 0.89228 0.98619 0 57451000 29234000 28218000 23730 1887 8945 9153 37199;37200 37199 LSHPLLEQLLPALR 14 0 1 Unmodified _LSHPLLEQLLPALR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.99 3 533.99088 1598.95081 82957.76 0.56539 0.00030191 -0.044548 -2.3788E-05 0.52084 0.00027812 533.990845164403 537.326895844093 116.78 0.92044 116.78 116.39 117.31 7.6294E-06 318 56 8 0 0 0 6.9965E-07 2 76229 92.856 92.856 1 0.94809 1.0934 0 54910000 28370000 26540000 23731 1887 8945 9153 37201;37202 37201 LSHPLLEQLLPALR 14 0 1 Unmodified _LSHPLLEQLLPALR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.9857 2 800.482682 1598.95081 69714.26 0.74539 0.00059667 0.31578 0.00025277 1.0612 0.00084944 800.984653703339 805.486774364485 116.74 0.33566 116.74 116.64 116.98 0 45 20 4 0 0 0 0.0073196 2 76450 40.589 40.589 1 0.86316 0.86995 0 6486700 3041800 3444900 23732 1887 8945 9153 37203;37204 37204 LSHPLLEQLLPALR 14 0 1 Unmodified _LSHPLLEQLLPALR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.3273 3 533.99088 1598.95081 82023.98 0.97713 0.00052178 -0.043395 -2.3173E-05 0.93374 0.00049861 533.990877701671 537.326870967772 128.61 0.76588 128.61 128.3 129.07 0 211 34 10 0 0 0 0.00097427 2 77586 47.606 47.606 1 2.0128 1.6919 0 26862000 8875200 17986000 23733 1887 8945 9153 37205;37206 37206 LSHPLLEQLLPALR 14 0 1 Unmodified _LSHPLLEQLLPALR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.9907 3 533.99088 1598.95081 82369.76 0.74991 0.00040045 -0.22107 -0.00011805 0.52884 0.0002824 533.99077006382 537.326830106885 128.31 0.56491 128.31 128.02 128.59 0 153 23 9 0 0 0 6.2266E-05 2 76472 56.482 56.482 1 1.5196 1.3258 0 53084000 18897000 34188000 23734 1887 8945 9153 37207;37208 37208 LSHYLQK 7 1 0 Unmodified _LSHYLQK_ 0 0 0 P17812;B4E1E0 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 444.7502 2 444.750527 887.486502 92048.16 -0.5226 -0.00023243 0.48671 0.00021646 -0.035892 -1.5963E-05 444.750199553983 448.75790285672 19.747 0.38041 19.747 19.507 19.888 0 43 17 7 0 0 0 0.014183 1 6108 100.74 42.575 1 1.8876 2.0913 0 46689000 15722000 30967000 23735 1494 8946 9154 37209 37209 LSIFDANESGFESYEALPQHK 21 1 0 Unmodified _LSIFDANESGFESYEALPQHK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.3856 3 794.713128 2381.11756 68278.55 0.76788 0.00061025 0.20106 0.00015979 0.96894 0.00077003 795.047422124125 797.384337799974 105.61 0.47807 105.61 105.38 105.86 0 145 32 6 0 0 0 9.7425E-08 1 67127 60.602 57.637 1 0.63421 0.66994 0 23652000 14041000 9611100 23736 222 8947 9155 37210 37210 LSIFDANESGFESYEALPQHK 21 1 0 Unmodified _LSIFDANESGFESYEALPQHK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 797.7194 3 794.713128 2381.11756 68174.61 0.78039 0.00062019 -0.4421 -0.00035134 0.3383 0.00026885 795.047269909303 797.718486450212 116.83 0.50565 116.83 116.62 117.12 -7.6294E-06 143 22 11 0 0 0 0.050558 1 67740 10.502 10.502 1 0.95435 0.78522 0 10250000 5242300 5008000 23737 222 8947 9155 37211 37211 LSILYPATTGR 11 0 1 Unmodified _LSILYPATTGR_ 0 0 0 V9HWC7;P30041 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3458 2 596.340238 1190.66592 81999.46 0.78056 0.00046548 0.44813 0.00026724 1.2287 0.00073272 596.340271265435 601.344569840729 83.344 0.50571 83.344 83.037 83.543 7.6294E-06 119 36 5 0 0 0 5.8219E-05 1 50988 98.943 48.065 1 4.0458 4.4995 0 43358000 8744600 34613000 23738 1527 8948 9156 37212 37212 LSILYPATTGR 11 0 1 Unmodified _LSILYPATTGR_ 0 0 0 V9HWC7;P30041 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.345 2 596.340238 1190.66592 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.154 1 96.154 95.654 96.654 7.6294E-06 0 0 0 0.038534 1 53129 45.137 16.05 1 23739 1527 8948 9156 37213 37213 LSINKPTSER 10 1 1 Unmodified _LSINKPTSER_ 0 0 1 A8K031;O14777;Q05DQ6;I3L4G3 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 382.2149 3 382.215539 1143.62479 95968.64 -0.18456 -7.0541E-05 -0.52124 -0.00019923 -0.7058 -0.00026977 382.215527591291 388.222616805371 23.703 0.47172 23.703 23.414 23.885 0 75 22 7 0 0 0 6.0254E-05 2 9561 96.342 51.17 1 0.87674 0.98633 0 22087000 10846000 11241000 23740 696 8949 9157 37214;37215 37215 LSINKPTSER 10 1 1 Unmodified _LSINKPTSER_ 0 0 1 A8K031;O14777;Q05DQ6;I3L4G3 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.8196 2 572.81967 1143.62479 81139.61 0.39263 0.00022491 -0.23525 -0.00013475 0.15739 9.0155E-05 572.819568137894 581.830935673382 23.381 0.26793 23.381 23.246 23.514 0 51 12 6 0 0 0 0.0014936 1 9257 93.649 68.873 1 0.8688 0.97285 0 12208000 6650600 5557600 23741 696 8949 9157 37216 37216 LSINKPTSER 10 1 1 Unmodified _LSINKPTSER_ 0 0 1 A8K031;O14777;Q05DQ6;I3L4G3 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 388.2227 3 382.215539 1143.62479 94875.47 -0.012416 -4.7455E-06 -0.41839 -0.00015992 -0.43081 -0.00016466 382.215551428177 388.222834641152 23.38 0.69829 23.38 22.843 23.542 0 84 30 7 0 0 0 0.015461 1 9272 41.399 32.989 1 0.83947 0.96645 0 27364000 14133000 13231000 23742 696 8949 9157 37217 37217 LSINTQLLAR 10 0 1 Unmodified _LSINTQLLAR_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.8442 2 564.840405 1127.66626 81660.28 0.64789 0.00036596 -0.19717 -0.00011137 0.45073 0.00025459 564.840003819762 569.84427791584 88.716 0.65974 88.716 88.482 89.142 0 170 49 6 0 0 0 1.3272E-06 3 53429 111.74 84.782 1 0.72654 0.74268 0 26492000 12819000 13673000 23743 786 8950 9158 37218;37219;37220 37219 LSINTQLLAR 10 0 1 Unmodified _LSINTQLLAR_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.845 2 564.840405 1127.66626 81699.23 0.79274 0.00044777 -0.29634 -0.00016739 0.4964 0.00028039 564.839850201249 569.844212481574 87.638 0.69099 87.638 87.405 88.096 0 177 53 5 0 0 0 1.1561E-05 2 53958 104.06 68.94 1 0.78266 0.85462 0 38789000 21357000 17432000 23744 786 8950 9158 37221;37222 37222 LSINTQLLAR 10 0 1 Unmodified _LSINTQLLAR_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.2643 2 564.840405 1127.66626 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.212 1 88.212 87.712 88.712 0 0 0 0 0.015347 1 54413 55.549 23.615 1 23745 786 8950 9158 37223 37223 LSINTQLLAR 10 0 1 Unmodified _LSINTQLLAR_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.8398 2 564.840405 1127.66626 83673.7 0.52564 0.0002969 -0.10108 -5.7092E-05 0.42457 0.00023981 564.839719729232 569.844200271702 102.24 0.9698 102.24 101.62 102.59 0 177 69 4 0 0 0 0.00022829 2 58072 93.143 65.301 1 1.4061 1.2014 0 5781300 2220800 3560500 23746 786 8950 9158 37224;37225 37225 LSINTQLLAR 10 0 1 Unmodified _LSINTQLLAR_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.3425 2 564.840405 1127.66626 84528.87 0.41326 0.00023343 -0.18524 -0.00010463 0.22803 0.0001288 564.839697746041 569.844224878557 102.05 0.91549 102.05 101.63 102.54 0 173 71 4 0 0 0 0.009241 1 57072 54.982 29.743 1 1.219 1.0241 0 4833800 2022500 2811300 23747 786 8950 9158 37226 37226 LSIPTYGLQCTR 12 0 1 Unmodified _LSIPTYGLQCTR_ 0 0 0 A0A0U1RQF0;P49327;J3KTF0 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.8709 2 704.866294 1407.71803 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.326 1 90.326 89.826 90.826 0 0 0 0 0.024765 1 54570 48.741 20.342 1 23748 587 8951 9159 37227 37227 LSIPTYGLQCTR 12 0 1 Unmodified _LSIPTYGLQCTR_ 0 0 0 A0A0U1RQF0;P49327;J3KTF0 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.871 2 704.866294 1407.71803 NaN NaN NaN -1.3932 -0.00098202 NaN NaN NaN NaN 89.184 0.42522 89.184 88.992 89.418 7.6294E-06 0 0 0 0.030732 1 54990 47.288 10.954 1 NaN NaN 0 7550600 0 7550600 23749 587 8951 9159 37228 37228 LSIQDNNVDLILATPPFSR 19 0 1 Unmodified _LSIQDNNVDLILATPPFSR_ 0 0 0 A0A0S2Q0B1;O14497;H0Y488;A0A1B0GTU5;Q96T01;Q96SM7;Q8NC65;A0A1B0GV63;A0A1B0GWJ2;A0A1B0GTJ8;A0A1B0GVK1;H0Y7H8;Q8NFD5;A4FU79;A0A1B0GTI6;Q96SY8;Q9NWF5;B4DYC0 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1B AT-rich interactive domain-containing protein 1A;AT-rich interactive domain-containing protein 1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1057.5686 2 1057.06804 2112.12152 60247.1 0.81502 0.00086153 -0.080845 -8.5459E-05 0.73417 0.00077607 1057.06821668196 1062.07180591981 126.18 0.42194 126.18 125.95 126.37 0 143 32 6 0 0 0 0.000548 2 82064 39.005 39.005 1 0.92407 0.96249 0 10499000 4817000 5682200 23750 544 8952 9160 37229;37230 37230 LSIQDNNVDLILATPPFSR 19 0 1 Unmodified _LSIQDNNVDLILATPPFSR_ 0 0 0 A0A0S2Q0B1;O14497;H0Y488;A0A1B0GTU5;Q96T01;Q96SM7;Q8NC65;A0A1B0GV63;A0A1B0GWJ2;A0A1B0GTJ8;A0A1B0GVK1;H0Y7H8;Q8NFD5;A4FU79;A0A1B0GTI6;Q96SY8;Q9NWF5;B4DYC0 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1B AT-rich interactive domain-containing protein 1A;AT-rich interactive domain-containing protein 1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1062.5745 2 1057.06804 2112.12152 59423.02 0.81498 0.00086149 -0.16643 -0.00017593 0.64855 0.00068556 1057.06774117648 1062.0717679659 125.8 0.33785 125.8 125.59 125.93 0 108 21 8 0 0 0 0.00012706 2 83805 47.774 40.644 1 0.95631 0.96087 0 11151000 5682600 5468800 23751 544 8952 9160 37231;37232 37231 LSISETYDLK 10 1 0 Unmodified _LSISETYDLK_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.8089 2 584.808436 1167.60232 NaN NaN NaN 0.6345 0.00037106 NaN NaN NaN NaN 77.164 0.47929 77.164 76.944 77.424 0 0 0 0 0.003852 1 45480 86.136 25.546 1 NaN NaN 0 6415000 6415000 0 + 23752 1164 8953 9161 37233 37233 LSIVPVR 7 0 1 Unmodified _LSIVPVR_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36;A4D0Y7 P15880 P15880 RPS2;rps2;OK/KNS-cl.7;LOC392781 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.262 2 392.257988 782.501424 94957.77 -0.020653 -8.1012E-06 0.15748 6.1771E-05 0.13682 5.367E-05 392.257942393894 397.262057712733 70.043 1.7695 70.043 69.133 70.903 0 623 152 7 0 0 0 0.026656 2 40985 87.582 37.462 1 1.0394 1.2269 0 248680000 124970000 123710000 23753 1485 8954 9162 37234;37235 37235 LSIVPVR 7 0 1 Unmodified _LSIVPVR_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36;A4D0Y7 P15880 P15880 RPS2;rps2;OK/KNS-cl.7;LOC392781 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 392.258 2 392.257988 782.501424 95812.83 0.21597 8.4714E-05 0.11294 4.4303E-05 0.32891 0.00012902 392.257974922127 397.2620141768 68.626 1.7984 68.626 67.723 69.522 0 581 151 7 0 0 0 0.026905 2 40695 82.263 43.044 1 1.0393 1.2044 0 295080000 150770000 144310000 23754 1485 8954 9162 37236;37237 37237 LSIVPVR 7 0 1 Unmodified _LSIVPVR_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36;A4D0Y7 P15880 P15880 RPS2;rps2;OK/KNS-cl.7;LOC392781 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 392.2577 2 392.257988 782.501424 94980.55 0.1238 4.8562E-05 0.0565 2.2163E-05 0.1803 7.0725E-05 392.257942864858 397.26201060172 79.726 1.0793 79.726 79.263 80.342 0 369 66 8 0 0 0 0.032919 1 42842 64.776 31.038 1 0.82369 0.69777 0 31749000 16624000 15125000 23755 1485 8954 9162 37238 37238 LSIVPVR 7 0 1 Unmodified _LSIVPVR_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36;A4D0Y7 P15880 P15880 RPS2;rps2;OK/KNS-cl.7;LOC392781 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 392.2579 2 392.257988 782.501424 94286.2 -0.042496 -1.6669E-05 0.14326 5.6197E-05 0.10077 3.9527E-05 392.25794610992 397.262061778337 79.795 1.1867 79.795 79.334 80.521 0 356 70 7 0 0 0 0.032919 1 42015 64.776 31.038 1 0.80044 0.69824 0 26034000 14380000 11654000 23756 1485 8954 9162 37239 37239 LSIVPVRR 8 0 2 Unmodified _LSIVPVRR_ 0 0 1 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36;A4D0Y7 P15880 P15880 RPS2;rps2;OK/KNS-cl.7;LOC392781 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 313.8747 3 313.874788 938.602535 104955.5 0.23573 7.3989E-05 0.042363 1.3297E-05 0.27809 8.7285E-05 313.874751426317 320.546904038516 47.413 0.95345 47.413 46.828 47.782 0 370 86 6 0 0 0 0.0042395 2 25518 54.157 30.729 1 1.0476 1.1434 0 169060000 82899000 86158000 23757 1485 8955 9163 37240;37241 37240 LSIVPVRR 8 0 2 Unmodified _LSIVPVRR_ 0 0 1 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36;A4D0Y7 P15880 P15880 RPS2;rps2;OK/KNS-cl.7;LOC392781 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 313.8746 3 313.874788 938.602535 104683.3 0.31233 9.8034E-05 0.13221 4.1496E-05 0.44454 0.00013953 313.874712282939 320.546998285442 45.369 0.81137 45.369 44.966 45.777 0 350 71 7 0 0 0 0.0036504 2 24702 55.676 28.422 1 1.0414 1.2395 0 219640000 114390000 105250000 23758 1485 8955 9163 37242;37243 37243 LSIVPVRR 8 0 2 Unmodified _LSIVPVRR_ 0 0 1 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36;A4D0Y7 P15880 P15880 RPS2;rps2;OK/KNS-cl.7;LOC392781 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.3081 2 470.308544 938.602535 87692.8 0.28467 0.00013388 0.048889 2.2993E-05 0.33356 0.00015688 470.308373697365 480.316796261731 45.394 0.57557 45.394 45.053 45.628 3.8147E-06 179 50 6 0 0 0 0.0056094 2 24811 97.071 55.569 1 0.94564 1.0904 0 63700000 30011000 33690000 23759 1485 8955 9163 37244;37245 37244 LSIVPVRR 8 0 2 Unmodified _LSIVPVRR_ 0 0 1 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36;A4D0Y7 P15880 P15880 RPS2;rps2;OK/KNS-cl.7;LOC392781 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 313.8747 3 313.874788 938.602535 105458.2 -0.1245 -3.9076E-05 -0.3 -9.4162E-05 -0.42449 -0.00013324 313.874613499753 320.546822024322 53.156 1.0489 53.156 52.744 53.792 0 375 78 7 0 0 0 0.018438 2 26240 31.229 11.443 1 0.78545 0.64918 0 23016000 12431000 10585000 23760 1485 8955 9163 37246;37247 37246 LSIVPVRR 8 0 2 Unmodified _LSIVPVRR_ 0 0 1 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;I3L404;E9PPT0;Q8NI61;E9PM36;A4D0Y7 P15880 P15880 RPS2;rps2;OK/KNS-cl.7;LOC392781 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 313.8748 3 313.874788 938.602535 103324 -0.26144 -8.2059E-05 0.2354 7.3885E-05 -0.02604 -8.1732E-06 313.874798558898 320.546973803395 52.899 1.0735 52.899 52.664 53.737 3.8147E-06 347 78 7 0 0 0 0.026545 2 25567 29.149 14.727 1 0.80198 0.74194 0 20166000 10381000 9785000 23761 1485 8955 9163 37248;37249 37249 LSIYNALK 8 1 0 Unmodified _LSIYNALK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2811 2 461.273835 920.533118 88714.86 -0.026133 -1.2054E-05 0.13777 6.3549E-05 0.11164 5.1495E-05 461.273876659865 465.280879539808 78.243 0.67659 78.243 77.905 78.581 0 220 59 5 0 0 0 0.0071364 2 47400 84.244 45.425 1 1.8073 2.0128 0 51477000 19805000 31672000 23762 1754 8956 9164 37250;37251 37250 LSLAEIYEQEYIK 13 1 0 Unmodified _LSLAEIYEQEYIK_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.4255 2 799.919246 1597.82394 64752.57 0.95036 0.00076021 -0.88128 -0.00070495 0.069083 5.5261E-05 800.419779280682 803.925004413919 111.5 0.60669 111.5 111.38 111.99 -7.6294E-06 154 40 7 0 0 0 7.7551E-06 1 71905 127.83 127.83 1 0.62918 0.68099 0 38704000 19911000 18794000 23763 924 8957 9165 37252 37252 LSLDDLLQR 9 0 1 Unmodified _LSLDDLLQR_ 0 0 0 Q53SY7;F8VPD4;P27708;H7BZB3 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.8037 2 536.803488 1071.59242 85273.58 1.1563 0.00062069 0.091026 4.8863E-05 1.2473 0.00066956 536.803377566408 541.807497431657 110.44 0.49055 110.44 110.2 110.69 0 111 36 5 0 0 0 0.010772 1 69512 58.981 27.046 1 0.97616 0.99795 0 26473000 12128000 14344000 23764 1259 8958 9166 37253 37253 LSLDDLLQR 9 0 1 Unmodified _LSLDDLLQR_ 0 0 0 Q53SY7;F8VPD4;P27708;H7BZB3 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.804 2 536.803488 1071.59242 85428.92 0.81829 0.00043926 -0.0046249 -2.4827E-06 0.81366 0.00043678 536.803547147279 541.807438813693 109.87 0.51337 109.87 109.62 110.13 0 93 32 4 0 0 0 0.001489 2 70582 84.743 42.456 1 0.86878 0.86489 0 7983500 4159900 3823700 23765 1259 8958 9166 37254;37255 37255 LSLDGQNIYNACCTLR 16 0 1 Unmodified _LSLDGQNIYNACCTLR_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;K7EK45;A0A087WU68;Q59H49 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 954.9545 2 949.448385 1896.88222 NaN NaN NaN -0.71392 -0.00067783 NaN NaN NaN NaN 91.879 0.51237 91.879 91.651 92.163 0 0 0 0 0.011769 1 55556 46.159 33.178 1 NaN NaN 0 7769500 0 7769500 23766 592 8959 9167 37256 37256 LSLDGQNIYNACCTLR 16 0 1 Unmodified _LSLDGQNIYNACCTLR_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;K7EK45;A0A087WU68;Q59H49 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 954.9515 2 949.448385 1896.88222 62578.38 0.85737 0.00081403 -0.45312 -0.00043021 0.40425 0.00038381 949.949549843882 955.453960813773 91.261 0.44195 91.261 91.024 91.466 7.6294E-06 149 40 6 0 0 0 0.00028077 3 56364 56.122 50.843 1 2.0284 2.0088 0 15545000 5622700 9922500 23767 592 8959 9167 37257;37258;37259 37257 LSLDGQNIYNACCTLR 16 0 1 Unmodified _LSLDGQNIYNACCTLR_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;K7EK45;A0A087WU68;Q59H49 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 949.9492 2 949.448385 1896.88222 64001.84 0.52551 0.00049894 -0.42328 -0.00040189 0.10223 9.7059E-05 949.949830362435 954.953706907433 105.55 0.3866 105.55 105.34 105.73 0 93 27 6 0 0 0 0.0057582 1 60184 35.737 35.737 1 1.324 1.107 0 3615200 1644800 1970300 23768 592 8959 9167 37260 37260 LSLDVEQAPSGQHSQAQLSGQQQR 24 0 1 Unmodified _LSLDVEQAPSGQHSQAQLSGQQQR_ 0 0 0 Q59E91;Q4G0F4;O00411;B4DZE5;K7EMH3 Q59E91 Q59E91 POLRMT DNA-directed RNA polymerase;DNA-directed RNA polymerase, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.0976 3 864.763545 2591.2688 NaN NaN NaN -0.070525 -6.0987E-05 NaN NaN NaN NaN 59.361 0.21944 59.361 59.231 59.45 0 0 0 0 9.3967E-06 2 33862 44.953 37.241 1 NaN NaN 0 5018800 5018800 0 23769 1363 8960 9168 37261;37262 37262 LSLDVEQAPSGQHSQAQLSGQQQR 24 0 1 Unmodified _LSLDVEQAPSGQHSQAQLSGQQQR_ 0 0 0 Q59E91;Q4G0F4;O00411;B4DZE5;K7EMH3 Q59E91 Q59E91 POLRMT DNA-directed RNA polymerase;DNA-directed RNA polymerase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.4336 3 864.763545 2591.2688 NaN NaN NaN -0.34712 -0.00030018 NaN NaN NaN NaN 58.312 0.34408 58.312 58.129 58.473 0 0 0 0 1.627E-09 1 33870 64.152 48.56 1 NaN NaN 0 6937700 0 6937700 23770 1363 8960 9168 37263 37263 LSLDVEQAPSGQHSQAQLSGQQQR 24 0 1 Unmodified _LSLDVEQAPSGQHSQAQLSGQQQR_ 0 0 0 Q59E91;Q4G0F4;O00411;B4DZE5;K7EMH3 Q59E91 Q59E91 POLRMT DNA-directed RNA polymerase;DNA-directed RNA polymerase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.0992 3 864.763545 2591.2688 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.334 1 58.334 57.834 58.834 -3.8147E-06 0 0 0 0.013433 1 33896 42.454 31.911 1 23771 1363 8960 9168 37264 37264 LSLDVEQAPSGQHSQAQLSGQQQR 24 0 1 Unmodified _LSLDVEQAPSGQHSQAQLSGQQQR_ 0 0 0 Q59E91;Q4G0F4;O00411;B4DZE5;K7EMH3 Q59E91 Q59E91 POLRMT DNA-directed RNA polymerase;DNA-directed RNA polymerase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 868.4358 3 864.763545 2591.2688 67359.45 0.28558 0.00024696 0.66846 0.00057806 0.95404 0.00082502 865.097788203864 868.100325742873 69.902 0.28325 69.902 69.704 69.987 -7.6294E-06 50 19 4 0 0 0 0.001683 2 35879 24.153 24.153 1 1.7428 1.4768 0 3020800 1196500 1824200 23772 1363 8960 9168 37265;37266 37265 LSLEGDHSTPPSAYGSVK 18 1 0 Unmodified _LSLEGDHSTPPSAYGSVK_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;A6NMY6;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.9742 3 615.639012 1843.89521 78718.14 0.46023 0.00028333 0.61752 0.00038017 1.0777 0.0006635 615.97386092351 618.310683524509 56.628 0.68096 56.628 56.341 57.022 0 278 62 7 0 0 0 0.00098429 1 31907 35.133 35.133 1 1.4803 1.4525 0 20496000 9102200 11394000 23773 193 8961 9169 37267 37267 LSLEGDHSTPPSAYGSVK 18 1 0 Unmodified _LSLEGDHSTPPSAYGSVK_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;A6NMY6;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.6459 3 615.639012 1843.89521 76239.12 0.223 0.00013729 0.74223 0.00045695 0.96523 0.00059423 615.639368894887 618.310804977099 55.447 0.60318 55.447 55.141 55.744 0 190 43 6 0 0 0 0.010247 1 31647 22.982 22.982 1 1.4145 1.4889 0 23858000 9107000 14751000 23774 193 8961 9169 37268 37268 LSLELFGR 8 0 1 Unmodified _LSLELFGR_ 0 0 0 E7EMW7;O95071;E5RFK7 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.776 2 467.77146 933.528367 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.81 1 104.81 104.31 105.31 0 0 0 0 0.051569 1 64811 54.157 25.008 1 23775 1218 8962 9170 37269 37269 LSLELFGR 8 0 1 Unmodified _LSLELFGR_ 0 0 0 E7EMW7;O95071;E5RFK7 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.7713 2 467.77146 933.528367 NaN NaN NaN -0.053176 -2.4874E-05 NaN NaN NaN NaN 104.15 0.45633 104.15 103.94 104.39 0 0 0 0 0.020574 1 65956 65.038 29.158 1 NaN NaN 0 3162200 3162200 0 23776 1218 8962 9170 37270 37270 LSLELFGR 8 0 1 Unmodified _LSLELFGR_ 0 0 0 E7EMW7;O95071;E5RFK7 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7764 2 467.77146 933.528367 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.01 1 104.01 103.51 104.51 0 0 0 0 0.023409 1 65844 66.073 31.265 1 23777 1218 8962 9170 37271 37271 LSLELFGR 8 0 1 Unmodified _LSLELFGR_ 0 0 0 E7EMW7;O95071;E5RFK7 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7761 2 467.77146 933.528367 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.3 1 104.3 103.8 104.8 0 0 0 0 0.010115 1 66057 76.774 37.938 1 23778 1218 8962 9170 37272 37272 LSLGTYASLHGR 12 0 1 Unmodified _LSLGTYASLHGR_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 428.9025 3 425.566571 1273.67788 91079.6 -0.36412 -0.00015496 -0.539 -0.00022938 -0.90312 -0.00038434 425.566739062837 428.902082836721 60.388 0.96698 60.388 60.234 61.201 3.8147E-06 271 77 6 0 0 0 0.0014511 1 35312 43.991 37.293 1 2.1244 2.4637 0 58271000 18958000 39313000 23779 1010 8963 9171 37273 37273 LSLHLQDQDSVK 12 1 0 Unmodified _LSLHLQDQDSVK_ 0 0 0 Q6P158;Q59G60;H7C109;B4DKW2 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.5802 3 461.580658 1381.72014 90514.45 0.046115 2.1286E-05 -0.9835 -0.00045396 -0.93738 -0.00043268 461.580003097638 464.585828567754 53.9 0.41874 53.9 53.751 54.169 -3.8147E-06 102 33 5 0 0 0 0.039607 1 30220 22.493 17.226 1 0.86069 0.84556 0 20225000 11291000 8933100 23780 1850 8964 9172 37274 37274 LSLINFR 7 0 1 Unmodified _LSLINFR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 431.7611 2 431.760895 861.507237 NaN NaN NaN 2.3363 0.0010087 NaN NaN NaN NaN 91.85 0.1775 91.85 91.688 91.865 0 0 0 0 0.030926 1 56845 67.741 24.279 1 NaN NaN 0 2363000 2363000 0 23781 1392 8965 9173 37275 37275 LSLINFR 7 0 1 Unmodified _LSLINFR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.7659 2 431.760895 861.507237 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.74 1 91.74 91.24 92.24 0 0 0 0 0.027538 1 56810 75.311 20.785 1 23782 1392 8965 9173 37276 37276 LSLLEEYGCCK 11 1 0 Unmodified _LSLLEEYGCCK_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.8262 2 686.317788 1370.62102 76139.77 0.77581 0.00053245 -0.24175 -0.00016592 0.53406 0.00036653 686.317846675032 690.324971831973 82.649 0.45157 82.649 82.444 82.895 0 217 36 8 0 0 0 5.6415E-10 1 49370 129.1 90.806 1 1.2328 1.2244 0 26060000 9696500 16363000 23783 1604 8966 9174 37277 37277 LSLLEEYGCCK 11 1 0 Unmodified _LSLLEEYGCCK_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.3256 2 686.317788 1370.62102 75403.93 0.90697 0.00062247 -0.53655 -0.00036824 0.37043 0.00025423 686.819069650296 690.324880187217 81.675 0.54308 81.675 81.402 81.945 0 210 45 7 0 0 0 1.1883E-16 1 49889 152.81 115.34 1 1.0594 1.104 0 34013000 17229000 16784000 23784 1604 8966 9174 37278 37278 LSLLLNDISR 10 0 1 Unmodified _LSLLLNDISR_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.3398 2 572.340238 1142.66592 80396.59 0.75119 0.00042994 -0.10923 -6.2519E-05 0.64196 0.00036742 572.340026587856 577.344267239171 104.52 1.0237 104.52 104.06 105.08 0 350 84 7 0 0 0 5.549E-06 2 64433 108.57 69.548 1 1.6738 1.8417 0 54554000 20671000 33882000 23785 1763 8967 9175 37279;37280 37280 LSLLLNDISR 10 0 1 Unmodified _LSLLLNDISR_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3445 2 572.340238 1142.66592 79840.66 0.31509 0.00018034 0.12568 7.1931E-05 0.44077 0.00025227 572.340142013806 577.344388503401 103.66 0.88698 103.66 103.34 104.23 0 351 75 6 0 0 0 1.5031E-06 2 65427 111.61 61.567 1 1.6634 1.9011 0 50447000 18337000 32110000 23786 1763 8967 9175 37281;37282 37281 LSLLLNDISR 10 0 1 Unmodified _LSLLLNDISR_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.345 2 572.340238 1142.66592 80142.81 0.50887 0.00029124 0.13913 7.9628E-05 0.64799 0.00037087 572.340189163776 577.344395608682 116.24 0.48084 116.24 116 116.48 0 78 20 5 0 0 0 0.0024806 1 68247 68.893 20.61 1 1.1945 1.0203 0 5749700 2549400 3200300 23787 1763 8967 9175 37283 37283 LSLLLNDISR 10 0 1 Unmodified _LSLLLNDISR_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.3453 2 572.340238 1142.66592 80228.12 0.77615 0.00044422 0.080804 4.6247E-05 0.85696 0.00049047 572.340102816159 577.344373029044 116.05 0.48499 116.05 115.8 116.28 0 106 23 6 0 0 0 0.0073657 1 67121 57.532 25.212 1 1.1364 0.93792 0 8224100 3692600 4531400 23788 1763 8967 9175 37284 37284 LSLLNGGLQEEELSTSLK 18 1 0 Unmodified _LSLLNGGLQEEELSTSLK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.0245 2 966.02022 1930.02589 61796.39 0.70008 0.00067629 0.19343 0.00018686 0.89351 0.00086315 966.019974374375 970.026546251686 111.83 0.68403 111.83 111.42 112.1 0 212 46 9 0 0 0 9.0412E-06 2 72162 80.706 70.918 1 0.65256 0.66332 0 30186000 18338000 11848000 23789 1421 8968 9176 37285;37286 37286 LSLLNGGLQEEELSTSLK 18 1 0 Unmodified _LSLLNGGLQEEELSTSLK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 970.0259 2 966.02022 1930.02589 61321.75 0.21202 0.00020481 -1.2612 -0.0012183 -1.0492 -0.0010135 966.018761962746 970.025132012875 123.71 0.8026 123.71 123.48 124.29 0 169 33 7 0 0 0 2.3402E-08 2 74075 97.631 97.631 1 1.7189 1.3914 0 23348000 10408000 12940000 23790 1421 8968 9176 37287;37288 37288 LSLLNGGLQEEELSTSLK 18 1 0 Unmodified _LSLLNGGLQEEELSTSLK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.0209 2 966.02022 1930.02589 61343 0.27066 0.00026146 -0.48581 -0.0004693 -0.21515 -0.00020784 966.018602781539 970.530005493749 123.53 0.71985 123.53 123.33 124.05 7.6294E-06 126 27 8 0 0 0 0.0067943 2 72964 32.068 32.068 1 1.2799 1.0282 0 17384000 8226300 9157600 23791 1421 8968 9176 37289;37290 37290 LSLLNGGLQEEELSTSLKR 19 1 1 Unmodified _LSLLNGGLQEEELSTSLKR_ 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.384 3 696.382942 2086.127 74299.16 0.90387 0.00062944 0.96133 0.00066945 1.8652 0.0012989 696.717457737415 702.390881346846 112.82 0.35258 112.82 112.63 112.98 7.6294E-06 57 15 6 0 0 0 0.039076 1 65598 13.037 9.5969 1 1.9685 1.6345 0 5883700 1475700 4408000 23792 1421 8969 9177 37291 37291 LSLLNGGLQEEELSTSLKR 19 1 1 Unmodified _LSLLNGGLQEEELSTSLKR_ 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.7188 3 696.382942 2086.127 73773.18 0.63597 0.00044288 1.1465 0.00079838 1.7824 0.0012413 696.718078238628 702.391196430917 112.63 0.41551 112.63 112.41 112.83 0 56 20 6 0 0 0 0.040505 2 64576 8.4943 5.0538 1 1.5105 1.267 0 5164000 1830100 3333900 23793 1421 8969 9177 37292;37293 37293 LSLLSSTSK 9 1 0 Unmodified _LSLLSSTSK_ 0 0 0 Q96SH1;P05549;A8K557;Q6VUC0;Q92481;C9JXZ2;H7C5E5;C1K3N0;B2RAN6;Q92754;Q7Z6R9 Q96SH1;Q7Z6R9 Q96SH1 TFAP2A;TFAP2E;TFAP2B;TFAP2C;TFAP2D Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta;Transcription factor AP-2 gamma;Transcription factor AP-2-delta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.2741 2 468.274032 934.533512 89045.84 0.090993 4.261E-05 0.13557 6.3486E-05 0.22657 0.0001061 468.273886382487 472.281229624595 62.847 0.23997 62.847 62.754 62.994 0 37 17 5 0 0 0 0.035569 1 31641 43.808 43.808 1 1.5128 1.1873 0 2057500 972200 1085300 23794 1448;1881 8970 9178 37294 37294 LSLMYAR 7 0 1 Oxidation (M) _LSLM(ox)YAR_ LSLM(1)YAR LSLM(49.59)YAR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.2362 2 435.231113 868.447674 93096.85 0.39782 0.00017314 0.77668 0.00033804 1.1745 0.00051118 435.231264131778 440.235955879801 49.775 0.50459 49.775 49.553 50.057 3.8147E-06 144 37 6 0 0 0 0.030002 1 27500 49.59 12.889 1 1.0313 1.0669 0 23337000 10049000 13287000 23795 1665 8971 9179 37295 37295 1455 LSLMYAR 7 0 1 Oxidation (M) _LSLM(ox)YAR_ LSLM(1)YAR LSLM(62.71)YAR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.2357 2 435.231113 868.447674 90131.48 0.37162 0.00016174 0.50556 0.00022004 0.87718 0.00038178 435.231137979465 440.235594811461 48.537 0.54021 48.537 48.273 48.813 0 122 38 4 0 0 0 0.016575 1 27175 62.714 14.866 1 1.0729 1.1719 0 30139000 15437000 14701000 23796 1665 8971 9179 37296 37296 1455 LSLNIDPDAK 10 1 0 Unmodified _LSLNIDPDAK_ 0 0 0 Q5CAQ5;V9HWP2;P14625;B4DU71;H0YIV0;B4DHT9 Q5CAQ5 Q5CAQ5 TRA1;HEL-S-125m;HSP90B1 Endoplasmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.2953 2 543.295496 1084.57644 83498.09 0.51216 0.00027825 -1.2907 -0.00070121 -0.7785 -0.00042296 543.295252197673 547.301494869597 78.501 0.39367 78.501 78.248 78.642 0 84 34 5 0 0 0 0.022046 1 46396 46.001 33.474 1 2.1547 2.1581 0 7648000 3016700 4631300 23797 1482 8972 9180 37297 37297 LSLQEQDAAIVK 12 1 0 Unmodified _LSLQEQDAAIVK_ 0 0 0 A4D218;Q9Y6D9;C9JTA2;C9K086 A4D218 A4D218 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.8354 2 657.866817 1313.71908 76063.66 0.75781 0.00049854 -0.34571 -0.00022743 0.41211 0.00027111 658.368631541504 661.873501129556 70.724 0.32988 70.724 70.539 70.868 0 89 26 6 0 0 0 0.0055139 1 42247 75.197 40.476 1 1.1247 1.1424 0 9131000 4516600 4614400 23798 668 8973 9181 37298 37298 LSLQESESK 9 1 0 Unmodified _LSLQESESK_ 0 0 0 D3DS96;Q9NRL2;Q59G54;B3KND8 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.2675 2 510.764029 1019.5135 NaN NaN NaN 0.011295 5.7689E-06 NaN NaN NaN NaN 29.056 0.30692 29.056 28.924 29.231 0 0 0 0 0.016688 1 13920 61.48 37.905 1 NaN NaN 0 10773000 0 10773000 23799 1187 8974 9182 37299 37299 LSLSNAISTALPLTQLR 17 0 1 Unmodified _LSLSNAISTALPLTQLR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.5303 2 899.525276 1797.036 65515.16 0.86331 0.00077657 0.21535 0.00019371 1.0787 0.00097028 900.026883115746 905.031005014987 127.67 0.43852 127.67 127.5 127.94 7.6294E-06 128 28 7 0 0 0 1.672E-05 2 83142 84.365 84.365 1 2.4864 2.5559 0 14237000 4728800 9508300 23800 1729 8975 9183 37300;37301 37300 LSLSNAISTALPLTQLR 17 0 1 Unmodified _LSLSNAISTALPLTQLR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.0311 2 899.525276 1797.036 65996.66 0.77313 0.00069545 0.26233 0.00023598 1.0355 0.00093143 899.525949337764 904.529679449965 127.31 0.42619 127.31 127.12 127.55 0 131 26 8 0 0 0 7.0084E-05 2 84935 70.089 70.089 1 2.643 2.6151 0 15357000 3924700 11433000 23801 1729 8975 9183 37302;37303 37302 LSLVAVSNSVPQDICCMAADGR 22 0 1 Oxidation (M) _LSLVAVSNSVPQDICCM(ox)AADGR_ LSLVAVSNSVPQDICCM(1)AADGR LSLVAVSNSVPQDICCM(61.21)AADGR 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1195.5677 2 1190.0587 2378.10285 56735.49 0.17969 0.00021384 0.13963 0.00016617 0.31932 0.00038001 1190.56050756312 1195.06255285462 105.26 0.43326 105.26 105.06 105.49 0 151 32 6 0 0 0 6.8141E-08 1 65106 61.212 53.236 1 1.162 1.2175 0 10929000 5203600 5725300 23802 486 8976 9184 37304 37304 333 LSLVAVSNSVPQDICCMAADGR 22 0 1 Oxidation (M) _LSLVAVSNSVPQDICCM(ox)AADGR_ LSLVAVSNSVPQDICCM(1)AADGR LSLVAVSNSVPQDICCM(50.09)AADGR 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1190.563 2 1190.0587 2378.10285 55879.07 0.14835 0.00017654 0.13717 0.00016324 0.28552 0.00033979 1190.56127659964 1195.56480211596 104.7 0.46759 104.7 104.46 104.93 -7.6294E-06 166 35 7 0 0 0 3.7126E-07 1 66466 50.088 39.358 1 1.1562 1.159 0 18090000 7276400 10814000 23803 486 8976 9184 37305 37305 333 LSMSQLNEK 9 1 0 Oxidation (M) _LSM(ox)SQLNEK_ LSM(1)SQLNEK LSM(78.26)SQLNEK 0 1 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.2725 2 533.265881 1064.51721 84227.68 0.49683 0.00026494 -0.89385 -0.00047666 -0.39703 -0.00021172 533.265226019591 537.272576294185 21.462 0.63589 21.462 21.258 21.893 -1.9073E-06 97 35 5 0 0 0 0.00096257 2 7695 78.264 61.791 1 0.74413 0.78052 0 15236000 8478100 6757700 23804 1691 8977 9185 37306;37307 37306 1516 LSMSQLNEK 9 1 0 Oxidation (M) _LSM(ox)SQLNEK_ LSM(1)SQLNEK LSM(40.24)SQLNEK 0 1 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.2661 2 533.265881 1064.51721 83125.38 0.37825 0.00020171 3.4215 0.0018246 3.7997 0.0020263 533.770559509683 537.273063259667 21.643 0.41852 21.643 21.382 21.801 0 50 20 6 0 0 0 0.021553 1 7746 40.239 21.464 1 0.38661 0.39058 0 8476400 5090100 3386300 23805 1691 8977 9185 37308 37308 1516 LSMSQLNEK 9 1 0 Unmodified _LSMSQLNEK_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.269 2 525.268424 1048.5223 84310.21 0.10974 5.7641E-05 -0.25109 -0.00013189 -0.14135 -7.4247E-05 525.26869317464 529.274898764367 52.35 0.70741 52.35 52.118 52.825 0 176 56 5 0 0 0 0.036483 1 25889 43.442 19.287 1 1.5782 1.2439 0 4052400 1402800 2649600 23806 1691 8977 9186 37309 37309 LSMSQLNEK 9 1 0 Unmodified _LSMSQLNEK_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.2688 2 525.268424 1048.5223 82840.67 0.1872 9.8331E-05 0.0039884 2.095E-06 0.19119 0.00010043 525.268477800537 529.777538339221 52.712 0.54507 52.712 52.491 53.036 0 142 43 5 0 0 0 0.026085 1 25525 47.603 23.448 1 1.2598 0.97777 0 2167400 1278700 888720 23807 1691 8977 9186 37310 37310 LSNIFVIGK 9 1 0 Unmodified _LSNIFVIGK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.8097 2 495.80276 989.590967 87748.34 0.38888 0.00019281 0.31129 0.00015434 0.70017 0.00034715 495.802352394205 499.810431409624 91.546 1.4104 91.546 91.159 92.569 0 613 123 8 0 0 0 0.00031179 1 56705 102.51 72.329 1 1.4696 1.7315 0 568090000 320280000 247820000 23808 824 8978 9187 37311 37311 LSNIFVIGK 9 1 0 Unmodified _LSNIFVIGK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.8026 2 495.80276 989.590967 85975.55 0.33457 0.00016588 0.19444 9.6406E-05 0.52902 0.00026229 495.80268365048 499.809985832981 105.99 1.8122 105.99 105.42 107.23 0 432 107 10 0 0 0 0.0011206 2 60488 89.698 70.916 1 1.17 1.0007 0 69903000 32838000 37065000 23809 824 8978 9187 37312;37313 37313 LSNIFVIGK 9 1 0 Unmodified _LSNIFVIGK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 499.8103 2 495.80276 989.590967 85940.13 0.18225 9.0359E-05 0.2202 0.00010918 0.40245 0.00019954 495.802660839888 499.810020311268 105.6 1.6694 105.6 105.16 106.83 -7.6294E-06 501 109 8 0 0 0 0.0003374 1 59301 101.6 79.919 1 1.2086 1.0243 0 63589000 30032000 33557000 23810 824 8978 9187 37314 37314 LSNLPTVDPIAVCHELYNTIR 21 0 1 Unmodified _LSNLPTVDPIAVCHELYNTIR_ 0 0 0 Q86U86;E7EVG2;C9J053;C9JQF1;C9JPI5;C9JCJ2 Q86U86 Q86U86 PBRM1 Protein polybromo-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 812.7618 3 809.089653 2424.24713 68201.82 0.90355 0.00073105 0.00012911 1.0447E-07 0.90368 0.00073116 809.423497623183 812.760125132224 131.12 0.31512 131.12 130.92 131.24 0 54 14 7 0 0 0 0.00043954 1 78664 34.221 30.114 1 1.5857 1.4013 0 3692900 1997300 1695600 23811 1883 8979 9188 37315 37315 LSNLVETPK 9 1 0 Unmodified _LSNLVETPK_ 0 0 0 H0Y3N9;Q9UPP1;A0A024R9Y4 H0Y3N9 H0Y3N9 PHF8 Histone lysine demethylase PHF8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.7871 2 500.787307 999.560061 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.375 1 47.375 46.875 47.875 0 0 0 0 0.0028353 1 25684 80.455 41.202 1 23812 1279 8980 9189 37316 37316 LSNLVETPK 9 1 0 Unmodified _LSNLVETPK_ 0 0 0 H0Y3N9;Q9UPP1;A0A024R9Y4 H0Y3N9 H0Y3N9 PHF8 Histone lysine demethylase PHF8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.7874 2 500.787307 999.560061 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.331 1 46.331 45.831 46.831 0 0 0 0 0.00091622 1 25563 98.233 50.576 1 23813 1279 8980 9189 37317 37317 LSNSTAVYFQDYQTSK 16 1 0 Unmodified _LSNSTAVYFQDYQTSK_ 0 0 0 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 930.9503 2 926.441605 1850.86866 63221.3 0.46193 0.00042795 0.030319 2.8089E-05 0.49225 0.00045604 926.943398668436 930.44833354703 86.011 0.39899 86.011 85.808 86.207 0 63 21 5 0 0 0 0.062681 1 46289 22.055 16.332 1 1.1609 0.96268 0 1777800 779490 998260 23814 103 8981 9190 37318 37318 LSNVNLQEK 9 1 0 Unmodified _LSNVNLQEK_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.7878 2 522.787838 1043.56112 83618.48 0.55271 0.00028895 0.24112 0.00012606 0.79383 0.000415 522.787712667702 526.795338511517 31.974 0.73124 31.974 31.527 32.258 0 284 70 6 0 0 0 1.1373E-05 1 15719 125.71 78.631 1 0.83376 0.90166 0 36309000 19903000 16406000 23815 2139 8982 9191 37319 37319 LSNVNLQEK 9 1 0 Unmodified _LSNVNLQEK_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.7879 2 522.787838 1043.56112 84057.34 0.33086 0.00017297 -0.31209 -0.00016316 0.018769 9.812E-06 522.78752434996 526.794851138867 31.357 0.38516 31.357 31.134 31.519 0 160 33 7 0 0 0 0.00019718 2 15391 106.6 63.73 1 0.9446 1.0562 0 107570000 57498000 50073000 23816 2139 8982 9191 37320;37321 37320 LSPDAIPGK 9 1 0 Unmodified _LSPDAIPGK_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.263 2 449.255643 896.496732 90571.95 0.45198 0.00020306 0.18001 8.0869E-05 0.63199 0.00028392 449.255704654724 453.262701055569 39.918 0.41332 39.918 39.721 40.134 0 144 35 6 0 0 0 0.0036023 2 21185 71.379 45.485 1 1.6838 1.8716 0 50545000 17105000 33439000 23817 587 8983 9192 37322;37323 37322 LSPELLNTGR 10 0 1 Unmodified _LSPELLNTGR_ 0 0 0 Q68E10;E9PB90;A8K2U2;P52789;Q53SG7;Q7Z7Q6 Q68E10 Q68E10 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.3091 2 550.308938 1098.60332 86636.65 0.18928 0.00010416 1.018 0.00056023 1.2073 0.00066439 550.308815104215 555.313779357438 66.463 0.43541 66.463 66.253 66.688 0 89 34 4 0 0 0 0.0046966 2 38322 61.161 34.777 1 1.688 1.6986 0 9336200 3617700 5718500 23818 714 8984 9193 37324;37325 37324 LSPELLNTGR 10 0 1 Unmodified _LSPELLNTGR_ 0 0 0 Q68E10;E9PB90;A8K2U2;P52789;Q53SG7;Q7Z7Q6 Q68E10 Q68E10 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.312 2 550.308938 1098.60332 NaN NaN NaN -0.0722 -3.9732E-05 NaN NaN NaN NaN 65.236 0.25189 65.236 65.096 65.348 0 0 0 0 0.036316 1 38436 50.353 31.375 1 NaN NaN 0 8449800 0 8449800 23819 714 8984 9193 37326 37326 LSPEPWTPETGLVTDAFK 18 1 0 Unmodified _LSPEPWTPETGLVTDAFK_ 0 0 0 Q8TAF6;O60488;B4DH39;B3KN05;B2RBE0;A0A024R497;O95573;B3KMA6;Q6PIM8 Q8TAF6;B3KN05 Q8TAF6 FACL4;ACSL4;ACSL3 Long-chain-fatty-acid--CoA ligase 4;Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 999.0127 2 994.504206 1986.99386 61069.81 0.35259 0.00035065 -0.58285 -0.00057964 -0.23026 -0.00022899 995.004799046236 998.511275657188 118.49 0.43919 118.49 118.26 118.7 -7.6294E-06 119 26 6 0 0 0 2.0449E-05 3 77934 72.496 72.496 1 1.8415 1.9158 0 33791000 10209000 23581000 23820 1394;150 8985 9194 37327;37328;37329 37329 LSPFMADIR 9 0 1 Oxidation (M) _LSPFM(ox)ADIR_ LSPFM(1)ADIR LSPFM(49.42)ADIR 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.2771 2 533.273509 1064.53247 83110.52 0.54429 0.00029026 0.23237 0.00012392 0.77666 0.00041417 533.27328726632 538.27808100973 75.056 0.69774 75.056 74.648 75.346 0 172 57 4 0 0 0 0.01044 1 43889 49.418 30.687 1 1.8121 1.8211 0 17292000 5764800 11527000 23821 1504 8986 9195 37330 37330 1268 LSPFMADIR 9 0 1 Oxidation (M) _LSPFM(ox)ADIR_ LSPFM(1)ADIR LSPFM(53.97)ADIR 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.2771 2 533.273509 1064.53247 NaN NaN NaN 1.2907 0.00068831 NaN NaN NaN NaN 73.738 0.65904 73.738 73.452 74.111 0 0 0 0 0.0088654 1 44196 53.968 20.417 1 NaN NaN 0 14978000 0 14978000 23822 1504 8986 9195 37331 37331 1268 LSPIFR 6 0 1 Unmodified _LSPIFR_ 0 0 0 A8K5M4;Q9Y6B5;Q13177 A8K5M4 A8K5M4 PAK2 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 366.7236 2 366.723781 731.43301 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.862 1 58.862 58.362 59.362 3.8147E-06 0 0 0 0.032336 1 34234 80.999 19.674 1 23823 750 8987 9196 37332 37332 LSPLFGIYYSVEK 13 1 0 Unmodified _LSPLFGIYYSVEK_ 0 0 0 Q969Z3 Q969Z3 Q969Z3 MARC2 Mitochondrial amidoxime reducing component 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.4177 2 758.408317 1514.80208 NaN NaN NaN -0.30579 -0.00023191 NaN NaN NaN NaN 118.19 0.23586 118.19 118.01 118.24 0 0 0 0 0.027209 1 77622 44.188 30.418 1 NaN NaN 0 3213100 0 3213100 23824 1956 8988 9197 37333 37333 LSPPECLNASLLGGVLR 17 0 1 Unmodified _LSPPECLNASLLGGVLR_ 0 0 0 Q96SH1;P05549;A8K557;Q6VUC0;Q92481;C9JXZ2;H7C5E5;C1K3N0;B2R9E2;B2RAN6;Q92754;H7C4N4 Q96SH1 Q96SH1 TFAP2A;TFAP2E;TFAP2B;TFAP2C Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta;Transcription factor AP-2 gamma ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 898.9908 2 898.490378 1794.9662 NaN NaN NaN -2.0333 -0.0018269 NaN NaN NaN NaN 121.12 0.38942 121.12 120.9 121.29 -7.6294E-06 0 0 0 0.044621 1 80201 43.991 30.085 1 NaN NaN 0 6658800 6658800 0 23825 1448 8989 9198 37334 37334 LSPPECLNASLLGGVLR 17 0 1 Unmodified _LSPPECLNASLLGGVLR_ 0 0 0 Q96SH1;P05549;A8K557;Q6VUC0;Q92481;C9JXZ2;H7C5E5;C1K3N0;B2R9E2;B2RAN6;Q92754;H7C4N4 Q96SH1 Q96SH1 TFAP2A;TFAP2E;TFAP2B;TFAP2C Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta;Transcription factor AP-2 gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 898.493 2 898.490378 1794.9662 64301.47 0.85622 0.00076931 -0.97368 -0.00087485 -0.11746 -0.00010554 898.49013948529 903.995839212024 134.07 0.33727 134.07 133.85 134.19 0 69 17 6 0 0 0 0.0018426 2 80812 37.998 37.998 1 1.2943 1.0747 0 5864100 3170200 2693900 23826 1448 8989 9198 37335;37336 37335 LSPPSSSAASSYSFSDLNSTR 21 0 1 Unmodified _LSPPSSSAASSYSFSDLNSTR_ 0 0 0 P50402 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1081.5077 2 1081.00583 2159.99711 58619.55 0.3618 0.0003911 0.53543 0.0005788 0.89722 0.0009699 1081.5081257678 1086.0100633922 84.692 0.55022 84.692 84.47 85.02 0 209 46 7 0 0 0 7.6031E-06 2 50791 48.823 43.839 1 0.99815 1.0343 0 22922000 12082000 10840000 23827 1590 8990 9199 37337;37338 37338 LSPPSSSAASSYSFSDLNSTR 21 0 1 Unmodified _LSPPSSSAASSYSFSDLNSTR_ 0 0 0 P50402 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1081.5083 2 1081.00583 2159.99711 59043.18 0.57239 0.00061876 0.56769 0.00061367 1.1401 0.0012324 1081.50772958995 1086.51159507289 83.938 0.53826 83.938 83.718 84.257 0 232 44 7 0 0 0 5.232E-05 3 51421 43.592 43.592 1 0.96371 1.0544 0 30712000 17354000 13359000 23828 1590 8990 9199 37339;37340;37341 37340 LSPPYSSPQEFAQDVGR 17 0 1 Unmodified _LSPPYSSPQEFAQDVGR_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 939.4523 2 939.455047 1876.89554 62284.89 0.7567 0.00071089 -0.11769 -0.00011056 0.63901 0.00060032 939.453670865567 944.458898947347 92.159 0.87912 92.159 91.709 92.588 0 526 82 8 0 0 0 0.00011651 3 55638 58.326 58.326 1 1.2158 1.3566 0 85060000 36571000 48488000 23829 862 8991 9200 37342;37343;37344 37343 LSPPYSSPQEFAQDVGR 17 0 1 Unmodified _LSPPYSSPQEFAQDVGR_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 939.4529 2 939.455047 1876.89554 62653.7 0.60656 0.00056984 -0.014968 -1.4062E-05 0.59159 0.00055577 939.453622253866 944.459135252801 91.438 0.91776 91.438 91.089 92.007 0 463 82 8 0 0 0 7.8158E-05 4 56494 63.181 63.181 1 1.2479 1.4336 0 78082000 32282000 45801000 23830 862 8991 9200 37345;37346;37347;37348 37347 LSPPYSSPQEFAQDVGR 17 0 1 Unmodified _LSPPYSSPQEFAQDVGR_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 944.4575 2 939.455047 1876.89554 63178.34 0.63394 0.00059556 0.20406 0.00019171 0.838 0.00078726 939.957247795586 944.458951396182 105.6 1.077 105.6 104.92 106 0 285 66 9 0 0 0 0.00053617 1 60151 47.189 47.189 1 1.3434 1.0995 0 13313000 5788500 7524100 23831 862 8991 9200 37349 37349 LSPPYSSPQEFAQDVGR 17 0 1 Unmodified _LSPPYSSPQEFAQDVGR_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 944.4595 2 939.455047 1876.89554 62792.97 0.61317 0.00057604 0.089733 8.43E-05 0.7029 0.00066034 939.957386055359 944.459056472732 105.45 0.93073 105.45 104.92 105.85 0 322 64 8 0 0 0 0.0037171 1 59216 35.809 35.809 1 1.3208 1.0718 0 12066000 4947200 7118700 23832 862 8991 9200 37350 37350 LSPTDNLPR 9 0 1 Unmodified _LSPTDNLPR_ 0 0 0 B4DFN6;B4DI06;A0A024R1T5;P09543 B4DFN6 B4DFN6 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.7789 2 506.774731 1011.53491 83665.44 0.65568 0.00033228 0.42231 0.00021401 1.078 0.0005463 506.775047214341 511.778873453981 48.818 0.63176 48.818 48.461 49.093 0 129 48 4 0 0 0 0.0067422 2 26677 63.419 28.062 1 1.3037 1.3452 0 24126000 11137000 12989000 23833 88 8992 9201 37351;37352 37351 LSPTDNLPR 9 0 1 Unmodified _LSPTDNLPR_ 0 0 0 B4DFN6;B4DI06;A0A024R1T5;P09543 B4DFN6 B4DFN6 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7795 2 506.774731 1011.53491 81459.3 0.15738 7.9755E-05 1.7021 0.00086256 1.8594 0.00094231 506.774764381357 511.778880931975 47.665 0.36996 47.665 47.409 47.779 -3.8147E-06 95 26 6 0 0 0 0.019545 1 26426 51.066 20.9 1 1.2644 1.3846 0 32183000 11815000 20368000 23834 88 8992 9201 37353 37353 LSPVPVPR 8 0 1 Unmodified _LSPVPVPR_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0;Q5QPM1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.7685 2 432.76872 863.522887 92942.98 -0.018979 -8.2136E-06 0.47138 0.000204 0.45241 0.00019579 432.768795641127 437.772954587027 57.886 0.67596 57.886 57.558 58.234 0 245 53 6 0 0 0 0.038748 1 32587 47.849 12.743 1 0.92965 1.0283 0 59594000 30690000 28904000 23835 741 8993 9202 37354 37354 LSPVPVPR 8 0 1 Unmodified _LSPVPVPR_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0;Q5QPM1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 432.7686 2 432.76872 863.522887 92815.25 0.16505 7.1428E-05 -0.043277 -1.8729E-05 0.12177 5.27E-05 432.768595782754 437.772720239019 56.748 0.66668 56.748 56.44 57.106 3.8147E-06 229 49 6 0 0 0 0.011407 2 32642 69.998 30.78 1 0.91342 1.0255 0 45692000 24031000 21661000 23836 741 8993 9202 37355;37356 37355 LSQEQVDNFTLDINTAYAR 19 0 1 Unmodified _LSQEQVDNFTLDINTAYAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1100.0448 2 1099.53984 2197.06513 56983.57 0.5551 0.00061036 0.65194 0.00071683 1.207 0.0013272 1100.04189696374 1105.04631137746 108.75 0.4927 108.75 108.56 109.05 0 193 31 8 0 0 0 4.0692E-08 4 67904 92.063 71.11 1 1.0113 1.0799 0 44512000 22476000 22036000 23837 1774;1029;1128 8994 9203 37357;37358;37359;37360 37360 LSQEQVDNFTLDINTAYAR 19 0 1 Unmodified _LSQEQVDNFTLDINTAYAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1100.0403 2 1099.53984 2197.06513 56050.69 0.11811 0.00012987 0.39375 0.00043295 0.51186 0.00056281 1099.5402388874 1105.04575265584 108.26 0.55611 108.26 108.03 108.59 0 217 37 8 0 0 0 1.7276E-05 3 69146 64.675 64.675 1 0.89098 1.0168 0 50025000 25507000 24518000 23838 1774;1029;1128 8994 9203 37361;37362;37363 37363 LSQEQVDNFTLDINTAYAR 19 0 1 Unmodified _LSQEQVDNFTLDINTAYAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1105.0468 2 1099.53984 2197.06513 58388.74 0.072411 7.9619E-05 0.22297 0.00024516 0.29538 0.00032478 1099.53966027211 1105.04536630103 120.08 0.39267 120.08 119.87 120.27 7.6294E-06 89 16 9 0 0 0 0.00013867 3 71156 47.532 44.823 1 1.7357 1.4913 0 7952500 3041600 4910900 23839 1774;1029;1128 8994 9203 37364;37365;37366 37366 LSQEQVDNFTLDINTAYAR 19 0 1 Unmodified _LSQEQVDNFTLDINTAYAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1104.5452 2 1099.53984 2197.06513 57209.2 0.25581 0.00028127 0.018765 2.0633E-05 0.27458 0.00030191 1100.04077898117 1104.5443066942 119.9 0.39983 119.9 119.68 120.08 0 71 15 8 0 0 0 0.0072614 2 70113 29.355 29.355 1 1.6992 1.3864 0 9414700 3245500 6169200 23840 1774;1029;1128 8994 9203 37367;37368 37367 LSQERPGVLLNQFPCENLLTVK 22 1 1 Unmodified _LSQERPGVLLNQFPCENLLTVK_ 0 0 1 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 852.7949 3 852.459857 2554.35774 66385.83 0.90651 0.00077276 0.048626 4.1452E-05 0.95514 0.00081422 852.459949788877 858.801790076769 123.39 0.437 123.39 123.26 123.69 -7.6294E-06 76 17 8 0 0 0 0.00086962 2 73753 32.702 32.702 1 1.0402 0.8516 0 4759200 1848900 2910300 23841 161 8995 9204 37369;37370 37370 LSQILTDFPK 10 1 0 Unmodified _LSQILTDFPK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.3386 2 581.329339 1160.64412 78681.96 0.83386 0.00048475 0.14586 8.4793E-05 0.97972 0.00056954 581.329365300675 585.336251871549 93.36 1.2071 93.36 92.72 93.927 0 589 104 9 0 0 0 5.7859E-12 4 56478 143.7 92.357 1 1.188 1.3958 0 310070000 142690000 167380000 23842 1183 8996 9205 37371;37372;37373;37374 37372 LSQILTDFPK 10 1 0 Unmodified _LSQILTDFPK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.3377 2 581.329339 1160.64412 79116.99 0.75389 0.00043826 0.00025606 1.4885E-07 0.75415 0.00043841 581.329258361436 585.336219038036 92.396 1.2411 92.396 91.844 93.085 0 569 104 8 0 0 0 1.5031E-06 3 56996 111.61 70.159 1 1.2034 1.4028 0 255530000 114200000 141330000 23843 1183 8996 9205 37375;37376;37377 37376 LSQILTDFPK 10 1 0 Unmodified _LSQILTDFPK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.3369 2 581.329339 1160.64412 79744.81 0.63027 0.0003664 0.32686 0.00019002 0.95714 0.00055641 581.329415461887 585.336520567509 106.56 1.3371 106.56 106.1 107.44 0 335 78 7 0 0 0 1.0035E-11 2 60888 138.66 78.069 1 1.6675 1.4072 0 56566000 23137000 33430000 23844 1183 8996 9205 37378;37379 37379 LSQILTDFPK 10 1 0 Unmodified _LSQILTDFPK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.3366 2 581.329339 1160.64412 79614.11 0.52737 0.00030657 0.42226 0.00024547 0.94963 0.00055205 581.329511103134 585.33656595481 106.39 1.3403 106.39 105.88 107.22 0 371 80 8 0 0 0 6.4433E-12 2 59828 142.92 82.333 1 1.6173 1.3639 0 54668000 21201000 33467000 23845 1183 8996 9205 37380;37381 37380 LSQLEEHLSQLQDNPPQEK 19 1 0 Unmodified _LSQLEEHLSQLQDNPPQEK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.0475 3 745.041356 2232.10224 69933.4 0.7216 0.00053762 -0.05178 -3.8578E-05 0.66982 0.00049904 745.375669683483 747.712699264797 82.197 1.1374 82.197 81.873 83.011 7.6294E-06 310 70 10 0 0 0 2.2661E-12 1 44650 102.07 102.07 1 1.528 1.2351 0 22978000 9462300 13516000 23846 186;1747;718 8997 9206 37382 37382 LSQNISELK 9 1 0 Unmodified _LSQNISELK_ 0 0 0 O60566;H3BTB9 O60566 O60566 BUB1B;PAK6 Mitotic checkpoint serine/threonine-protein kinase BUB1 beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.2979 2 516.290214 1030.56587 NaN NaN NaN 0.57577 0.00029726 NaN NaN NaN NaN 43.618 0.28323 43.618 43.473 43.756 0 0 0 0 0.0064705 1 23312 72.23 19.064 1 NaN NaN 0 5375700 0 5375700 23847 1396 8998 9207 37383 37383 LSQNNFALGYK 11 1 0 Unmodified _LSQNNFALGYK_ 0 0 0 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.835 2 627.827495 1253.64044 77257.64 0.39594 0.00024858 0.047928 3.0091E-05 0.44387 0.00027867 627.82718724146 631.834630228042 67.194 1.076 67.194 66.552 67.628 0 422 83 10 0 0 0 1.9747E-06 3 38770 111.95 66.267 1 1.5929 1.8043 0 99010000 39356000 59654000 23848 2124 8999 9208 37384;37385;37386 37386 LSQNNFALGYK 11 1 0 Unmodified _LSQNNFALGYK_ 0 0 0 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.834 2 627.827495 1253.64044 76396.69 0.40917 0.00025689 -0.15919 -9.9946E-05 0.24998 0.00015694 627.827044841077 631.8345305959 66.065 0.81842 66.065 65.51 66.329 0 316 69 8 0 0 0 3.3061E-08 2 38908 120.15 72.552 1 1.5211 1.7126 0 122160000 48461000 73698000 23849 2124 8999 9208 37387;37388 37387 LSQNNFALGYK 11 1 0 Unmodified _LSQNNFALGYK_ 0 0 0 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.8344 2 627.827495 1253.64044 NaN NaN NaN 0.18012 0.00011309 NaN NaN NaN NaN 77.097 0.56696 77.097 76.841 77.408 0 0 0 0 0.0020693 1 41147 78.149 38.082 1 NaN NaN 0 9419100 0 9419100 23850 2124 8999 9208 37389 37389 LSQNNFALGYK 11 1 0 Unmodified _LSQNNFALGYK_ 0 0 0 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.8354 2 627.827495 1253.64044 NaN NaN NaN 0.13662 8.5771E-05 NaN NaN NaN NaN 77.396 0.64007 77.396 77.131 77.771 0 0 0 0 0.0022857 1 40494 76.064 41.811 1 NaN NaN 0 6055400 0 6055400 23851 2124 8999 9208 37390 37390 LSQSLLELWR 10 0 1 Unmodified _LSQSLLELWR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.3536 2 622.853512 1243.69247 NaN NaN NaN -0.30484 -0.00018987 NaN NaN NaN NaN 114.72 0.53557 114.72 114.47 115.01 0 0 0 0 0.0018068 2 72813 83.948 83.948 1 NaN NaN 0 3689500 3689500 0 23852 122 9000 9209 37391;37392 37392 LSQSLLELWR 10 0 1 Unmodified _LSQSLLELWR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.8582 2 622.853512 1243.69247 78201.18 0.65012 0.00040493 0.056225 3.502E-05 0.70634 0.00043995 622.853512120397 627.857648002434 114.13 0.56702 114.13 113.8 114.36 7.6294E-06 168 41 6 0 0 0 7.1687E-13 2 74185 149.72 129.93 1 0.98642 0.99791 0 9550400 4327600 5222900 23853 122 9000 9209 37393;37394 37393 LSQSLLELWR 10 0 1 Unmodified _LSQSLLELWR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.8579 2 622.853512 1243.69247 78430.05 0.93495 0.00058234 1.4972 0.00093255 2.4322 0.0015149 622.853528322294 627.859073823044 126.15 0.67668 126.15 125.89 126.57 -7.6294E-06 102 26 6 0 0 0 0.00048323 2 75849 86.136 50.698 1 1.7508 1.5205 0 2216400 974650 1241800 23854 122 9000 9209 37395;37396 37396 LSQSLLELWR 10 0 1 Unmodified _LSQSLLELWR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.8544 2 622.853512 1243.69247 80447.65 0.66097 0.00041169 0.65363 0.00040711 1.3146 0.0008188 622.854146328966 627.857980972225 125.95 0.46863 125.95 125.7 126.17 0 78 21 6 0 0 0 0.0051694 2 74769 60.518 60.518 1 1.4511 1.3128 0 2197200 934490 1262700 23855 122 9000 9209 37397;37398 37398 LSQTPTHMPTILDDPGK 17 1 0 Oxidation (M) _LSQTPTHM(ox)PTILDDPGK_ LSQTPTHM(1)PTILDDPGK LSQTPTHM(49.34)PTILDDPGK 0 1 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;B3KMW2;Q9H9C5 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.6522 3 622.980381 1865.91931 NaN NaN NaN -0.7032 -0.00043808 NaN NaN NaN NaN 49.768 0.15099 49.768 49.701 49.852 0 0 0 0 0.0068863 1 28053 49.343 44.538 1 NaN NaN 0 6119600 0 6119600 23856 260 9001 9210 37399 37399 195 LSQVSDSVSGQTVVDPK 17 1 0 Unmodified _LSQVSDSVSGQTVVDPK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.4495 2 873.449431 1744.88431 64751.96 0.4535 0.00039611 0.24057 0.00021012 0.69407 0.00060623 873.450005801175 877.456558695931 59.163 0.57613 59.163 58.874 59.45 3.8147E-06 232 44 7 0 0 0 1.3392E-06 2 33593 87.863 87.863 1 0.77576 0.77657 0 26677000 13799000 12878000 23857 1418 9002 9211 37400;37401 37401 LSQVSDSVSGQTVVDPK 17 1 0 Unmodified _LSQVSDSVSGQTVVDPK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 877.9592 2 873.449431 1744.88431 65506.27 0.2429 0.00021216 0.67163 0.00058663 0.91453 0.00079879 873.449849175552 877.457124908808 69.713 0.46144 69.713 69.461 69.923 0 158 31 6 0 0 0 0.0095331 1 35691 32.068 32.068 1 0.83934 0.68467 0 5729900 2984900 2745000 23858 1418 9002 9211 37402 37402 LSQYLDSSQVK 11 1 0 Unmodified _LSQYLDSSQVK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.3308 2 634.330067 1266.64558 77184.34 0.86467 0.00054848 0.50283 0.00031896 1.3675 0.00086744 634.330213906623 638.337700232103 47.452 0.44515 47.452 47.226 47.671 3.8147E-06 149 37 6 0 0 0 9.8138E-05 2 25665 110.14 67.537 1 1.596 1.5752 0 25108000 7576200 17532000 23859 1205 9003 9212 37403;37404 37403 LSQYLDSSQVK 11 1 0 Unmodified _LSQYLDSSQVK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3376 2 634.330067 1266.64558 77797.16 0.77523 0.00049175 0.69919 0.00044352 1.4744 0.00093527 634.329983348958 638.337729999666 46.383 0.42824 46.383 46.109 46.537 -3.8147E-06 142 31 6 0 0 0 4.3615E-10 2 25593 131.12 91.863 1 1.6194 1.6722 0 32835000 11029000 21805000 23860 1205 9003 9212 37405;37406 37406 LSQYLDSSQVK 11 1 0 Unmodified _LSQYLDSSQVK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.3299 2 634.330067 1266.64558 79411.51 0.50525 0.0003205 0.5471 0.00034704 1.0524 0.00066754 634.329706260045 638.338292412717 55.437 0.64963 55.437 54.985 55.635 0 94 38 5 0 0 0 0.023735 1 27200 50.292 28.829 1 0.7713 0.65974 0 1417900 771790 646130 23861 1205 9003 9212 37407 37407 LSSARPGGLGSSSLYGLGASRPR 23 0 3 Unmodified _LSSARPGGLGSSSLYGLGASRPR_ 0 0 2 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.3055 4 562.305458 2245.19273 80176.16 0.67164 0.00037767 -0.053152 -2.9888E-05 0.61849 0.00034778 562.555908334366 570.062233361556 74.346 0.65472 74.346 74.037 74.692 0 224 43 8 0 0 0 0.060464 1 39446 12.554 8.368 1 1.2396 1.4244 0 6250100 2877900 3372200 + 23862 1171;1158 9004 9213 37408 37408 LSSASTGKPPLSVEDDFEK 19 2 0 Unmodified _LSSASTGKPPLSVEDDFEK_ 0 0 1 B4DLG2;O75152;B4DYM8;A0A1B0GTU1;A0A024R8H9;A0A1B0GUI2 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.0123 3 669.668749 2005.98442 75171.69 0.64697 0.00043326 -0.21194 -0.00014193 0.43503 0.00029133 669.668662760562 675.011432467447 71.189 0.45601 71.189 70.981 71.437 0 136 38 5 0 0 0 0.023915 1 41405 21.045 16.043 1 2.2312 2.6231 0 13962000 4730500 9231700 23863 996 9005 9214 37409 37409 LSSCDSFTSTINELNHCLSLR 21 0 1 Unmodified _LSSCDSFTSTINELNHCLSLR_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.0541 3 818.717779 2453.13151 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.02 1 113.02 112.52 113.52 7.6294E-06 0 0 0 0.027079 1 73257 43.045 35.933 1 23864 1454 9006 9215 37410 37410 LSSCDSFTSTINELNHCLSLR 21 0 1 Unmodified _LSSCDSFTSTINELNHCLSLR_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.0526 3 818.717779 2453.13151 66735.19 0.85349 0.00069877 -0.82446 -0.000675 0.029033 2.377E-05 819.05187600538 822.721995076321 124.98 0.35498 124.98 124.81 125.17 0 86 16 8 0 0 0 0.00029288 2 75010 35.195 32.271 1 0.84005 0.7145 0 5352300 2443500 2908700 23865 1454 9006 9215 37411;37412 37411 LSSCDSFTSTINELNHCLSLR 21 0 1 Unmodified _LSSCDSFTSTINELNHCLSLR_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 822.3865 3 818.717779 2453.13151 NaN NaN NaN -0.89931 -0.00073628 NaN NaN NaN NaN 124.86 0.38001 124.86 124.63 125.01 -7.6294E-06 0 0 0 0.0045686 1 73981 34.217 31.164 1 NaN NaN 0 3925200 0 3925200 23866 1454 9006 9215 37413 37413 LSSDVLTLLIK 11 1 0 Unmodified _LSSDVLTLLIK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.3795 2 601.373746 1200.73294 78017.33 0.87803 0.00052803 0.010864 6.5336E-06 0.8889 0.00053456 601.373614065688 605.38075552767 123.36 0.61463 123.36 123.09 123.7 0 213 46 7 0 0 0 0.00033438 3 79834 86.624 65.652 1 3.7755 3.8167 0 18325000 3571300 14754000 23867 946 9007 9216 37414;37415;37416 37414 LSSDVLTLLIK 11 1 0 Unmodified _LSSDVLTLLIK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3737 2 601.373746 1200.73294 78205.81 1.0418 0.0006265 0.084088 5.0568E-05 1.1259 0.00067707 601.373621140049 605.380832141035 122.96 0.59466 122.96 122.57 123.16 -7.6294E-06 189 45 7 0 0 0 1.4137E-05 2 81430 107.21 96.376 1 3.3918 3.6124 0 36440000 7287300 29152000 23868 946 9007 9216 37417;37418 37418 LSSEDEEEDEAEDDQSEASGK 21 1 0 Unmodified _LSSEDEEEDEAEDDQSEASGK_ 0 0 0 Q8NEJ9;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1154.4532 2 1149.94623 2297.8779 NaN NaN NaN 0.22675 0.00026075 NaN NaN NaN NaN 25.975 0.14664 25.975 25.916 26.063 0 0 0 0 8.6811E-06 1 11509 55.213 50.412 1 NaN NaN 0 2223000 0 2223000 23869 1927 9008 9217 37419 37419 LSSEDEEEDEAEDDQSEASGKK 22 2 0 Unmodified _LSSEDEEEDEAEDDQSEASGKK_ 0 0 1 Q8NEJ9;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.3423 3 809.664897 2425.97286 NaN NaN NaN -0.26834 -0.00021727 NaN NaN NaN NaN 21.268 0.28971 21.268 21.092 21.382 0 0 0 0 4.9704E-05 1 7369 49.559 46.221 1 NaN NaN 0 3636400 0 3636400 23870 1927 9009 9218 37420 37420 LSSEDEEEDEAEDDQSEASGKK 22 2 0 Unmodified _LSSEDEEEDEAEDDQSEASGKK_ 0 0 1 Q8NEJ9;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.9998 3 809.664897 2425.97286 67220.77 0.50907 0.00041218 0.23002 0.00018624 0.73909 0.00059842 809.999143529094 815.342431444539 25.207 0.49434 25.207 25.004 25.498 -1.9073E-06 122 23 9 0 0 0 0.02454 1 9125 15.506 15.506 1 2.114 1.8286 0 3970500 1396200 2574300 23871 1927 9009 9218 37421 37421 LSSEDEEEDEAEDDQSEASGKK 22 2 0 Unmodified _LSSEDEEEDEAEDDQSEASGKK_ 0 0 1 Q8NEJ9;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 815.343 3 809.664897 2425.97286 67234.42 0.65259 0.00052838 -0.025103 -2.0325E-05 0.62748 0.00050805 809.99923760516 815.341935805659 25.552 0.41344 25.552 25.331 25.744 0 105 17 8 0 0 0 0.029547 1 8796 13.608 13.608 1 1.9554 1.6865 0 3114400 996850 2117500 23872 1927 9009 9218 37422 37422 LSSEMNTSTVNSAR 14 0 1 Oxidation (M) _LSSEM(ox)NTSTVNSAR_ LSSEM(1)NTSTVNSAR LSSEM(117.25)NTSTVNSAR 0 1 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.8577 2 756.851569 1511.68859 NaN NaN NaN 0.54035 0.00040896 NaN NaN NaN NaN 20.002 0.23668 20.002 19.807 20.043 0 0 0 0 4.7788E-11 1 6418 117.25 93.931 1 NaN NaN 0 5211200 0 5211200 23873 1502 9010 9219 37423 37423 1260 LSSEMNTSTVNSAR 14 0 1 Oxidation (M) _LSSEM(ox)NTSTVNSAR_ LSSEM(1)NTSTVNSAR LSSEM(83.05)NTSTVNSAR 0 1 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.8523 2 756.851569 1511.68859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.045 1 20.045 19.545 20.545 0 0 0 0 0.0002082 1 6518 83.045 65.181 1 23874 1502 9010 9219 37424 37424 1260 LSSEMNTSTVNSAR 14 0 1 Oxidation (M) _LSSEM(ox)NTSTVNSAR_ LSSEM(1)NTSTVNSAR LSSEM(179.19)NTSTVNSAR 0 1 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.8557 2 756.851569 1511.68859 69766.43 0.31803 0.0002407 -0.13714 -0.0001038 0.18089 0.0001369 756.851448496387 761.855551525282 19.879 0.44675 19.879 19.657 20.103 0 65 18 5 0 0 0 8.4314E-47 2 6118 179.19 148.63 1 1.0403 1.0541 0 20146000 7772000 12374000 23875 1502 9010 9219 37425;37426 37425 1260 LSSEMNTSTVNSAR 14 0 1 Unmodified _LSSEMNTSTVNSAR_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 753.8566 2 748.854112 1495.69367 68466.66 0.50764 0.00038015 -0.048229 -3.6116E-05 0.45941 0.00034403 748.854118575884 753.858242841409 39.194 0.3418 39.194 39.029 39.371 0 119 28 6 0 0 0 0.0092506 1 17834 37.327 37.327 1 1.2184 1.0321 0 5020400 2257800 2762600 23876 1502 9010 9220 37427 37427 LSSEMNTSTVNSAR 14 0 1 Unmodified _LSSEMNTSTVNSAR_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.8596 2 748.854112 1495.69367 70184.1 0.27736 0.0002077 0.37306 0.00027937 0.65042 0.00048707 748.854616842586 753.858946283296 39.428 0.35083 39.428 39.264 39.614 0 126 25 7 0 0 0 0.00016831 2 17525 73.848 73.848 1 1.0988 0.97151 0 3915300 1520300 2395100 23877 1502 9010 9220 37428;37429 37429 LSSFWQLIVDEK 12 1 0 Unmodified _LSSFWQLIVDEK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.8973 2 732.890292 1463.76603 NaN NaN NaN -0.0071858 -5.2664E-06 NaN NaN NaN NaN 125.58 0.52607 125.58 125.28 125.8 -7.6294E-06 0 0 0 2.1569E-08 1 81563 112.13 85.011 1 NaN NaN 0 3251200 0 3251200 23878 1205 9011 9221 37430 37430 LSSFWQLIVDEK 12 1 0 Unmodified _LSSFWQLIVDEK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.3991 2 732.890292 1463.76603 71998.76 1.1453 0.00083935 -0.35402 -0.00025946 0.79124 0.0005799 732.889735155252 736.897268634276 125.09 0.51993 125.09 124.82 125.34 0 141 37 6 0 0 0 0.00022091 1 83193 83 83 1 1.6354 1.6519 0 8407700 3718600 4689100 23879 1205 9011 9221 37431 37431 LSSGFDDIDLPSAVK 15 1 0 Unmodified _LSSGFDDIDLPSAVK_ 0 0 0 Q9Y446;E9PKC4 Q9Y446 Q9Y446 PKP3 Plakophilin-3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.3635 2 782.398678 1562.7828 NaN NaN NaN -0.68769 -0.00053804 NaN NaN NaN NaN 104.41 0.25783 104.41 104.29 104.55 7.6294E-06 0 0 0 0.026564 1 64537 41.242 26.098 1 NaN NaN 0 3860500 3860500 0 23880 2142 9012 9222 37432 37432 LSSGFDDIDLPSAVK 15 1 0 Unmodified _LSSGFDDIDLPSAVK_ 0 0 0 Q9Y446;E9PKC4 Q9Y446 Q9Y446 PKP3 Plakophilin-3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 782.4019 2 782.398678 1562.7828 NaN NaN NaN 0.27736 0.00021701 NaN NaN NaN NaN 103.69 0.43645 103.69 103.51 103.95 0 0 0 0 0.012739 1 65611 48.659 31.988 1 NaN NaN 0 3471500 3471500 0 23881 2142 9012 9222 37433 37433 LSSGQYPNLETFALDVR 17 0 1 Unmodified _LSSGQYPNLETFALDVR_ 0 0 0 Q9UIF8 Q9UIF8 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 955.4879 2 955.486347 1908.95814 61465.57 0.80233 0.00076661 0.02762 2.639E-05 0.82995 0.000793 955.487722110935 960.49049755399 128.53 0.34628 128.53 128.35 128.69 0 83 14 7 0 0 0 0.027408 1 77667 23.881 18.602 1 1.0707 0.89536 0 3210200 1646700 1563500 23882 2102 9013 9223 37434 37434 LSSLFVK 7 1 0 Unmodified _LSSLFVK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 401.2515 2 397.244547 792.47454 NaN NaN NaN -0.14351 -5.701E-05 NaN NaN NaN NaN 65.63 0.55924 65.63 65.332 65.891 0 0 0 0 0.032441 1 37810 66.993 6.1944 1 NaN NaN 0 9239400 0 9239400 23883 1205 9014 9224 37435 37435 LSSLFVK 7 1 0 Unmodified _LSSLFVK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.2514 2 397.244547 792.47454 NaN NaN NaN 0.030806 1.2237E-05 NaN NaN NaN NaN 64.098 0.57808 64.098 63.862 64.44 0 0 0 0 0.032923 1 37677 78.616 0 1 NaN NaN 0 7695000 0 7695000 23884 1205 9014 9224 37436 37436 LSSNAVSQITR 11 0 1 Unmodified _LSSNAVSQITR_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q9NTA9 B4DW97 B4DW97 DDX50;mcdrh;DKFZp761E0323 ATP-dependent RNA helicase DDX50 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.3273 2 588.322576 1174.6306 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.719 1 45.719 45.219 46.219 0 0 0 0 7.4939E-06 1 24628 94.309 51.063 1 23885 416 9015 9225 37437 37437 LSSPATLNSR 10 0 1 Unmodified _LSSPATLNSR_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.2854 2 523.285463 1044.55637 NaN NaN NaN -0.24871 -0.00013015 NaN NaN NaN NaN 34.092 1.4183 34.092 33.516 34.934 0 0 0 0 9.1716E-12 2 17168 128.36 53.252 1 NaN NaN 0 580610000 580610000 0 + 23886 1148 9016 9226 37438;37439 37439 LSSPATLNSR 10 0 1 Unmodified _LSSPATLNSR_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2855 2 523.285463 1044.55637 NaN NaN NaN -0.39557 -0.000207 NaN NaN NaN NaN 33.585 1.0831 33.585 33.049 34.132 0 0 0 0 1.8219E-11 1 16698 125.82 50.079 1 NaN NaN 0 1184300000 1184300000 0 + 23887 1148 9016 9226 37440 37440 LSSPATLNSR 10 0 1 Unmodified _LSSPATLNSR_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.2854 2 523.285463 1044.55637 NaN NaN NaN -0.10285 -5.3821E-05 NaN NaN NaN NaN 38.829 1.4356 38.829 38.431 39.867 0 0 0 0 0.00012149 1 17754 94.692 32.692 1 NaN NaN 0 135160000 135160000 0 + 23888 1148 9016 9226 37441 37441 LSSPATLNSR 10 0 1 Unmodified _LSSPATLNSR_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.2859 2 523.285463 1044.55637 NaN NaN NaN -0.067241 -3.5186E-05 NaN NaN NaN NaN 38.939 1.235 38.939 38.549 39.784 0 0 0 0 0.0018068 3 17097 83.948 23.524 1 NaN NaN 0 122640000 122640000 0 + 23889 1148 9016 9226 37442;37443;37444 37443 LSSPVLHR 8 0 1 Unmodified _LSSPVLHR_ 0 0 0 Q16643;D6R9W4;B3KSQ7;D6RCR4 Q16643 Q16643 DBN1 Drebrin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 303.5151 3 303.51526 907.52395 NaN NaN NaN 0.42326 0.00012847 NaN NaN NaN NaN 28.889 0.24761 28.889 28.776 29.023 0 0 0 0 0.029754 1 13789 32.142 11.66 1 NaN NaN 0 11786000 11786000 0 23890 1773 9017 9227 37445 37445 LSSPVLHR 8 0 1 Unmodified _LSSPVLHR_ 0 0 0 Q16643;D6R9W4;B3KSQ7;D6RCR4 Q16643 Q16643 DBN1 Drebrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 303.5151 3 303.51526 907.52395 111431.5 0.28202 8.5597E-05 -0.40937 -0.00012425 -0.12735 -3.8654E-05 303.515120452301 306.85116614176 28.087 0.25578 28.087 27.947 28.203 0 48 13 5 0 0 0 0.0052195 2 13333 60.76 31.422 1 1.3179 1.3197 0 18812000 8728700 10083000 23891 1773 9017 9227 37446;37447 37447 LSSQISAGEEK 11 1 0 Unmodified _LSSQISAGEEK_ 0 0 0 A0A024R9D2;Q86UE4;E5RJU9;H0YB56 A0A024R9D2 A0A024R9D2 MTDH Protein LYRIC MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.7947 2 574.793318 1147.57208 80051.24 0.37739 0.00021692 0.56223 0.00032317 0.93962 0.00054009 574.793379605749 578.800966961875 28.611 0.3054 28.611 28.485 28.79 1.9073E-06 43 17 5 0 0 0 0.0080859 1 11502 51.436 27.481 1 0.75604 0.63893 0 2083600 1223200 860340 23892 275 9018 9228 37448 37448 LSSQISAGEEK 11 1 0 Unmodified _LSSQISAGEEK_ 0 0 0 A0A024R9D2;Q86UE4;E5RJU9;H0YB56 A0A024R9D2 A0A024R9D2 MTDH Protein LYRIC MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.7941 2 574.793318 1147.57208 80717.48 0.099158 5.6995E-05 -0.12577 -7.2291E-05 -0.02661 -1.5295E-05 575.294083054361 578.800512414897 28.923 0.32751 28.923 28.705 29.032 0 51 18 5 0 0 0 0.026417 1 11124 40.727 36.793 1 0.51146 0.4237 0 1722500 1267300 455160 23893 275 9018 9228 37449 37449 LSSSFSSR 8 0 1 Unmodified _LSSSFSSR_ 0 0 0 D3DS96;Q9NRL2;Q59G54;B3KND8 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 435.7195 2 435.719424 869.424296 88959.16 -0.16717 -7.2839E-05 0.040359 1.7585E-05 -0.12681 -5.5254E-05 435.719219868228 440.723551577897 26.787 0.60978 26.787 26.552 27.161 0 155 29 8 0 0 0 0.029249 2 10201 52.716 1.3121 1 1.6729 1.3728 0 17094000 6068900 11025000 23894 1187 9019 9229 37450;37451 37451 LSSSGIWANTSPEAELFPALRPR 23 0 2 Unmodified _LSSSGIWANTSPEAELFPALRPR_ 0 0 1 A0A024RCP3;Q12899 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.7792 3 833.7712 2498.29177 NaN NaN NaN 1.6048 0.0013381 NaN NaN NaN NaN 128.34 0.61983 128.34 127.98 128.6 0 0 0 0 0.0095976 1 77467 31.27 23.558 1 NaN NaN 0 4631100 0 4631100 23895 365 9020 9230 37452 37452 LSSSGIWANTSPEAELFPALRPR 23 0 2 Unmodified _LSSSGIWANTSPEAELFPALRPR_ 0 0 1 A0A024RCP3;Q12899 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 840.7792 3 833.7712 2498.29177 NaN NaN NaN 2.3115 0.0019273 NaN NaN NaN NaN 128.08 0.51302 128.08 127.76 128.28 0 0 0 0 2.1817E-05 1 76429 53.342 41.214 1 NaN NaN 0 3327900 0 3327900 23896 365 9020 9230 37453 37453 LSSSGIWANTSPEAELFPALRPR 23 0 2 Unmodified _LSSSGIWANTSPEAELFPALRPR_ 0 0 1 A0A024RCP3;Q12899 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 833.7695 3 833.7712 2498.29177 NaN NaN NaN -1.4537 -0.0012121 NaN NaN NaN NaN 128.15 0.36079 128.15 127.96 128.32 0 0 0 0 0.0044073 2 76484 37.458 24.002 1 NaN NaN 0 6091200 6091200 0 23897 365 9020 9230 37454;37455 37455 LSSTQEEVHQLR 12 0 1 Unmodified _LSSTQEEVHQLR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.5834 3 476.247678 1425.72121 87428.72 0.3902 0.00018583 -0.36622 -0.00017441 0.023984 1.1422E-05 476.247620873251 479.583611094739 27.203 0.54391 27.203 26.978 27.521 0 70 28 6 0 0 0 0.00015813 1 12480 69.864 45.364 1 1.2747 1.3008 0 30803000 13398000 17405000 23898 1581 9021 9231 37456 37456 LSSTQEEVHQLR 12 0 1 Unmodified _LSSTQEEVHQLR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.5834 3 476.247678 1425.72121 88021.06 0.17385 8.2796E-05 -0.20306 -9.6707E-05 -0.02921 -1.3911E-05 476.24742627188 479.583812654307 26.666 0.39073 26.666 26.451 26.842 0 76 19 6 0 0 0 5.9796E-05 2 12056 84.718 56.534 1 1.0844 1.1686 0 25986000 11477000 14510000 23899 1581 9021 9231 37457;37458 37457 LSSTQEEVHQLR 12 0 1 Unmodified _LSSTQEEVHQLR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.8677 2 713.867879 1425.72121 NaN NaN NaN 0.57037 0.00040717 NaN NaN NaN NaN 26.712 0.19759 26.712 26.588 26.786 0 0 0 0 0.0018756 1 12114 73.067 46.394 1 NaN NaN 0 8515300 8515300 0 23900 1581 9021 9231 37459 37459 LSSTSVYDLTPGEK 14 1 0 Unmodified _LSSTSVYDLTPGEK_ 0 0 0 D3DS96;Q9NRL2;Q59G54;A0A087WWN7 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.8839 2 748.877578 1495.7406 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.963 1 72.963 72.463 73.463 0 0 0 0 0.0022937 1 42795 64.55 36.808 1 23901 1187 9022 9232 37460 37460 LSSTSVYDLTPGEK 14 1 0 Unmodified _LSSTSVYDLTPGEK_ 0 0 0 D3DS96;Q9NRL2;Q59G54;A0A087WWN7 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.8845 2 748.877578 1495.7406 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.887 1 71.887 71.387 72.387 0 0 0 0 0.0032541 1 43141 57.175 38.043 1 23902 1187 9022 9232 37461 37461 LSSTSVYDLTPGEK 14 1 0 Unmodified _LSSTSVYDLTPGEK_ 0 0 0 D3DS96;Q9NRL2;Q59G54;A0A087WWN7 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.8844 2 748.877578 1495.7406 NaN NaN NaN -0.61777 -0.00046264 NaN NaN NaN NaN 83.688 0.45843 83.688 83.456 83.914 0 0 0 0 0.016025 1 45601 48.004 37.174 1 NaN NaN 0 2248800 0 2248800 23903 1187 9022 9232 37462 37462 LSTADLFR 8 0 1 Unmodified _LSTADLFR_ 0 0 0 H0Y3N9;Q9UPP1;A0A024R9Y4;H0Y589;H0Y7M8;H7BZB7 H0Y3N9 H0Y3N9 PHF8 Histone lysine demethylase PHF8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.7533 2 461.753267 921.491981 NaN NaN NaN -0.094252 -4.3521E-05 NaN NaN NaN NaN 82.638 0.56583 82.638 82.317 82.883 0 0 0 0 0.052149 1 49365 49.097 26.077 1 NaN NaN 0 3726600 3726600 0 23904 1279 9023 9233 37463 37463 LSTALAR 7 0 1 Unmodified _LSTALAR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 366.2234 2 366.224146 730.433738 NaN NaN NaN 0.48677 0.00017827 NaN NaN NaN NaN 29.26 0.21644 29.26 29.141 29.357 1.9073E-06 0 0 0 0.024498 2 14096 94.401 58.595 1 NaN NaN 0 15872000 15872000 0 23905 560 9024 9234 37464;37465 37464 LSTALAR 7 0 1 Unmodified _LSTALAR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 366.2239 2 366.224146 730.433738 101378.1 0.27803 0.00010182 0.27077 9.9164E-05 0.54881 0.00020099 366.224161089881 371.228234533467 28.568 0.30223 28.568 28.428 28.73 0 97 28 5 0 0 0 0.0076797 1 13653 128.82 68.522 1 1.1578 1.2565 0 28034000 12693000 15341000 23906 560 9024 9234 37466 37466 LSTDHIPILYR 11 0 1 Unmodified _LSTDHIPILYR_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.5869 3 443.250472 1326.72959 91868.83 0.2845 0.0001261 0.32673 0.00014482 0.61123 0.00027093 443.250310967995 446.586767307152 82.314 0.88475 82.314 81.741 82.626 7.6294E-06 256 75 6 0 0 0 0.0052917 2 49053 45.433 38.46 1 2.4385 2.5127 0 19801000 5593000 14208000 23907 1688 9025 9235 37467;37468 37467 LSTDVDLIVEVLR 13 0 1 Unmodified _LSTDVDLIVEVLR_ 0 0 0 Q92615 Q92615 Q92615 LARP4B La-related protein 4B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.4273 2 736.421956 1470.82936 NaN NaN NaN 0.9305 0.00068524 NaN NaN NaN NaN 130.36 0.075012 130.36 130.31 130.39 0 0 0 0 4.6889E-09 1 85017 112.15 88.543 1 NaN NaN 0 918050 0 918050 23908 1949 9026 9236 37469 37469 LSTDVDLIVEVLR 13 0 1 Unmodified _LSTDVDLIVEVLR_ 0 0 0 Q92615 Q92615 Q92615 LARP4B La-related protein 4B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.4259 2 736.421956 1470.82936 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.95 1 129.95 129.45 130.45 0 0 0 0 0.00095389 1 86832 78.653 61.627 1 23909 1949 9026 9236 37470 37470 LSTGCTGTLVAEK 13 1 0 Unmodified _LSTGCTGTLVAEK_ 0 0 0 B3KQQ9;O95084 B3KQQ9 B3KQQ9 PRSS23 Serine protease 23 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8446 2 668.842484 1335.67042 NaN NaN NaN 0.82891 0.00055441 NaN NaN NaN NaN 47.232 0.38639 47.232 47.051 47.437 0 0 0 0 0.0024172 1 25620 69.721 41.516 1 NaN NaN 0 5144400 5144400 0 23910 929 9027 9237 37471 37471 LSTGCTGTLVAEK 13 1 0 Unmodified _LSTGCTGTLVAEK_ 0 0 0 B3KQQ9;O95084 B3KQQ9 B3KQQ9 PRSS23 Serine protease 23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.843 2 668.842484 1335.67042 75813.95 0.62429 0.00041755 1.1513 0.00077006 1.7756 0.0011876 668.842742105676 672.850034863362 54.702 0.46745 54.702 54.467 54.934 -3.8147E-06 100 30 5 0 0 0 0.02611 1 27293 44.543 30.308 1 0.84237 0.7071 0 1884600 951310 933240 23911 929 9027 9237 37472 37472 LSTIALALGVER 12 0 1 Unmodified _LSTIALALGVER_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;C9J9C1;E9PPI5;E9PNM7;E9PHZ6;A8K8B0;P30154 B4DQY1;A8K8B0 B4DQY1 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8745 2 621.874445 1241.73434 77828.86 0.75031 0.0004666 -0.10156 -6.3158E-05 0.64875 0.00040344 621.874149136984 626.878578530295 106.54 0.62679 106.54 106.18 106.81 0 222 45 6 0 0 0 7.1571E-05 2 66169 97.456 97.456 1 1.4693 1.4883 0 18026000 7395300 10630000 23912 723;774 9028 9238 37473;37474 37474 LSTIALALGVER 12 0 1 Unmodified _LSTIALALGVER_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;C9J9C1;E9PPI5;E9PNM7;E9PHZ6;A8K8B0;P30154 B4DQY1;A8K8B0 B4DQY1 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.8745 2 621.874445 1241.73434 77765.19 0.69775 0.00043391 0.098682 6.1368E-05 0.79643 0.00049528 621.87435948104 626.878595377142 105.8 0.72551 105.8 105.44 106.17 0 232 53 6 0 0 0 0.0001255 2 67263 94.297 94.297 1 1.4806 1.5678 0 23713000 9426800 14287000 23913 723;774 9028 9238 37475;37476 37476 LSTIALALGVER 12 0 1 Unmodified _LSTIALALGVER_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;C9J9C1;E9PPI5;E9PNM7;E9PHZ6;A8K8B0;P30154 B4DQY1;A8K8B0 B4DQY1 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.8748 2 621.874445 1241.73434 NaN NaN NaN -0.044281 -2.7538E-05 NaN NaN NaN NaN 118.12 0.43344 118.12 117.92 118.36 0 0 0 0 0.0013862 1 69734 78.653 63.023 1 NaN NaN 0 2107900 2107900 0 23914 723;774 9028 9238 37477 37477 LSTIALALGVER 12 0 1 Unmodified _LSTIALALGVER_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;C9J9C1;E9PPI5;E9PNM7;E9PHZ6;A8K8B0;P30154 B4DQY1;A8K8B0 B4DQY1 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8788 2 621.874445 1241.73434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.09 1 118.09 117.59 118.59 0 0 0 0 0.00018568 1 69688 85.958 60.821 1 23915 723;774 9028 9238 37478 37478 LSTIALALGVER 12 0 1 Unmodified _LSTIALALGVER_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;C9J9C1;E9PPI5;E9PNM7;E9PHZ6;A8K8B0;P30154 B4DQY1;A8K8B0 B4DQY1 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.8748 2 621.874445 1241.73434 NaN NaN NaN -0.27392 -0.00017035 NaN NaN NaN NaN 117.93 0.43469 117.93 117.66 118.09 0 0 0 0 0.0015255 1 68699 77.062 54.322 1 NaN NaN 0 2583900 2583900 0 23916 723;774 9028 9238 37479 37479 LSTIALALGVER 12 0 1 Unmodified _LSTIALALGVER_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;C9J9C1;E9PPI5;E9PNM7;E9PHZ6;A8K8B0;P30154 B4DQY1;A8K8B0 B4DQY1 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.8784 2 621.874445 1241.73434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.87 1 117.87 117.37 118.37 0 0 0 0 0.00048886 1 68615 79.659 54.883 1 23917 723;774 9028 9238 37480 37480 LSTLLNHNNDTEEEER 16 0 1 Unmodified _LSTLLNHNNDTEEEER_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.9697 3 638.632697 1912.87626 76715.83 0.76836 0.0004907 0.34086 0.00021768 1.1092 0.00070838 638.967129032254 641.969183063621 38.399 0.43229 38.399 38.218 38.65 0 75 24 5 0 0 0 0.0072054 1 19740 27.032 22.679 1 0.70797 0.73282 0 23189000 10919000 12270000 23918 1843 9029 9239 37481 37481 LSTLLNHNNDTEEEER 16 0 1 Unmodified _LSTLLNHNNDTEEEER_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.969 3 638.632697 1912.87626 76634.48 0.56311 0.00035962 0.046135 2.9463E-05 0.60925 0.00038909 638.966872085388 641.968697769085 44.143 0.41174 44.143 43.969 44.381 0 136 26 7 0 0 0 0.050258 1 20944 15.392 11.489 1 0.87032 0.75526 0 2424100 1345500 1078600 23919 1843 9029 9239 37482 37482 LSTLLNHNNDTEEEER 16 0 1 Unmodified _LSTLLNHNNDTEEEER_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.9677 3 638.632697 1912.87626 75059.98 0.63928 0.00040827 -0.70524 -0.00045039 -0.065956 -4.2122E-05 638.632622601498 641.968626424813 44.154 0.48267 44.154 43.923 44.406 0 164 30 8 0 0 0 0.012453 1 20408 23.527 23.527 1 0.81868 0.73929 0 2100400 1040200 1060200 23920 1843 9029 9239 37483 37483 LSTPIAGLDNINVFLK 16 1 0 Unmodified _LSTPIAGLDNINVFLK_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.4927 2 857.990537 1713.96652 66679.9 0.89276 0.00076598 0.1208 0.00010364 1.0136 0.00086962 858.491876877085 861.997710765016 128.29 0.18858 128.29 128.2 128.39 0 51 11 7 0 0 0 0.0004078 2 85749 50.207 40.643 1 1.8448 1.9312 0 10533000 3724700 6808600 23921 640 9030 9240 37484;37485 37484 LSTPSSVTK 9 1 0 Unmodified _LSTPSSVTK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4;Q05DV5;H7C5K1 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2657 2 460.258382 918.502212 94013.88 0.29182 0.00013431 0.041482 1.9093E-05 0.3333 0.0001534 460.258463122531 464.265431663789 25.676 0.33413 25.676 25.543 25.877 1.9073E-06 55 22 4 0 0 0 0.018227 1 11271 52.255 24.037 1 1.291 1.3527 0 10734000 4387500 6346800 23922 1873 9031 9241 37486 37486 LSTPSTGGSVDIISVK 16 1 0 Unmodified _LSTPSTGGSVDIISVK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.4288 2 780.927603 1559.84065 NaN NaN NaN -0.39393 -0.00030763 NaN NaN NaN NaN 87.44 0.31308 87.44 87.251 87.564 0 0 0 0 1.1062E-06 1 52711 89.629 69.326 1 NaN NaN 0 9031400 9031400 0 23923 1224 9032 9242 37487 37487 LSTPSTGGSVDIISVK 16 1 0 Unmodified _LSTPSTGGSVDIISVK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.9299 2 780.927603 1559.84065 NaN NaN NaN -0.71381 -0.00055743 NaN NaN NaN NaN 87.602 0.049072 87.602 87.575 87.624 0 0 0 0 0.0020191 1 52846 61.532 38.213 1 NaN NaN 0 3286900 3286900 0 23924 1224 9032 9242 37488 37488 LSTPSTGGSVDIISVK 16 1 0 Unmodified _LSTPSTGGSVDIISVK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.935 2 780.927603 1559.84065 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.289 1 87.289 86.789 87.789 0 0 0 0 0.017914 1 52684 43.594 25.73 1 23925 1224 9032 9242 37489 37489 LSTPSTGGSVDIISVK 16 1 0 Unmodified _LSTPSTGGSVDIISVK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.43 2 780.927603 1559.84065 70601.3 0.58615 0.00045774 0.41949 0.00032759 1.0056 0.00078534 781.429129942679 784.934207073098 86.614 0.33253 86.614 86.435 86.768 0 67 28 4 0 0 0 0.00015541 2 53371 72.496 61.972 1 0.8915 0.93588 0 19591000 8102300 11488000 23926 1224 9032 9242 37490;37491 37491 LSTPSTGGSVDIISVK 16 1 0 Unmodified _LSTPSTGGSVDIISVK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 785.4376 2 780.927603 1559.84065 68615.72 0.44218 0.00034531 0.19319 0.00015087 0.63537 0.00049617 781.429536898377 784.934442893476 100.4 0.42943 100.4 100.23 100.65 7.6294E-06 126 36 5 0 0 0 0.0001515 2 56751 63.662 63.662 1 2.3637 1.8698 0 4159700 1575000 2584600 23927 1224 9032 9242 37492;37493 37492 LSTPSTGGSVDIISVK 16 1 0 Unmodified _LSTPSTGGSVDIISVK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.9353 2 780.927603 1559.84065 71182.08 0.49023 0.00038283 0.16679 0.00013025 0.65702 0.00051309 781.429067578059 785.436453577013 100.26 0.44699 100.26 100.05 100.49 0 120 35 6 0 0 0 0.022807 3 55764 27.33 25.53 1 1.9949 1.6315 0 4788600 1422700 3366000 23928 1224 9032 9242 37494;37495;37496 37494 LSTQEGLVQELQK 13 1 0 Unmodified _LSTQEGLVQELQK_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.9084 2 736.901388 1471.78822 70819.69 0.61498 0.00045318 -0.17663 -0.00013016 0.43835 0.00032302 736.901366497155 740.90840114982 76.666 0.51543 76.666 76.442 76.957 0 186 43 6 0 0 0 4.5278E-07 2 45144 112.13 112.13 1 0.85693 0.90186 0 30642000 18087000 12555000 23929 371 9033 9243 37497;37498 37497 LSTQEGLVQELQK 13 1 0 Unmodified _LSTQEGLVQELQK_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.908 2 736.901388 1471.78822 71619.88 0.67805 0.00049966 -0.0099117 -7.3039E-06 0.66814 0.00049236 736.901050633841 740.908277624599 75.703 0.46658 75.703 75.469 75.936 0 192 41 6 0 0 0 3.4365E-14 2 45563 136.48 136.48 1 0.85389 0.89281 0 34389000 17354000 17035000 23930 371 9033 9243 37499;37500 37499 LSTQEGLVQELQK 13 1 0 Unmodified _LSTQEGLVQELQK_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.9088 2 736.901388 1471.78822 72301.29 0.73568 0.00054212 0.048805 3.5965E-05 0.78448 0.00057809 736.901305174733 740.908648642611 88.167 0.53425 88.167 87.907 88.442 0 155 32 6 0 0 0 0.010118 2 48524 42.041 42.041 1 1.3635 1.0807 0 4776400 1987600 2788800 23931 371 9033 9243 37501;37502 37501 LSTQEGLVQELQK 13 1 0 Unmodified _LSTQEGLVQELQK_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.9095 2 736.901388 1471.78822 73243.79 0.6001 0.00044221 0.12946 9.5401E-05 0.72956 0.00053761 736.901439930776 740.908737662486 88.237 0.5677 88.237 87.989 88.557 0 123 30 6 0 0 0 7.5482E-05 2 47737 94.616 94.616 1 1.438 1.1585 0 4278400 1850100 2428300 23932 371 9033 9243 37503;37504 37503 LSTSGNRPPANAETFSCNK 19 1 1 Unmodified _LSTSGNRPPANAETFSCNK_ 0 0 1 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.3318 3 684.32521 2049.9538 73778.88 0.47794 0.00032706 0.67833 0.0004642 1.1563 0.00079126 684.659518889172 690.33449713066 33.938 0.43124 33.938 33.804 34.235 0 129 40 7 0 0 0 0.00029222 3 16894 37.237 27.488 1 0.84712 0.91864 0 15323000 8008200 7314900 23933 684 9034 9244 37505;37506;37507 37506 LSTSGNRPPANAETFSCNK 19 1 1 Unmodified _LSTSGNRPPANAETFSCNK_ 0 0 1 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.3336 3 684.32521 2049.9538 72791.4 0.59261 0.00040554 0.82373 0.0005637 1.4163 0.00096924 684.659462812724 690.334211090324 33.147 0.30814 33.147 32.971 33.279 0 110 27 6 0 0 0 0.00013384 1 16570 44.382 35.128 1 0.97971 1.1132 0 18168000 8307900 9860400 23934 684 9034 9244 37508 37508 LSTSGNRPPANAETFSCNK 19 1 1 Unmodified _LSTSGNRPPANAETFSCNK_ 0 0 1 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.3263 3 684.32521 2049.9538 72530.03 0.31775 0.00021745 0.29037 0.0001987 0.60812 0.00041615 684.324781734016 690.333219253747 39.532 0.38832 39.532 39.318 39.706 0 155 28 9 0 0 0 0.0034415 2 18104 29.136 19.605 1 1.3429 1.1107 0 3985700 1856900 2128800 23935 684 9034 9244 37509;37510 37509 LSTSGNRPPANAETFSCNK 19 1 1 Unmodified _LSTSGNRPPANAETFSCNK_ 0 0 1 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.3331 3 684.32521 2049.9538 74050.47 0.31328 0.00021439 0.41137 0.00028151 0.72465 0.0004959 684.659496616581 690.332985476704 39.684 0.39862 39.684 39.491 39.89 0 148 31 6 0 0 0 0.063548 1 17717 14.105 14.105 1 1.4783 1.2551 0 3308400 1244300 2064100 23936 684 9034 9244 37511 37511 LSVAAQEAAR 10 0 1 Unmodified _LSVAAQEAAR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.2842 2 508.28018 1014.54581 83952.04 0.5355 0.00027218 0.68724 0.00034931 1.2227 0.00062149 508.780954176344 513.285549647656 29.075 0.32319 29.075 28.866 29.19 0 54 16 6 0 0 0 1.136E-09 1 14000 133.13 73.115 1 0.76026 0.80928 0 43283000 22713000 20570000 23937 1754 9035 9245 37512 37512 LSVAAQEAAR 10 0 1 Unmodified _LSVAAQEAAR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.2868 2 508.28018 1014.54581 87504.42 0.2889 0.00014684 2.7588 0.0014022 3.0477 0.0015491 508.280915637301 513.285858583566 28.304 0.32815 28.304 28.111 28.44 1.9073E-06 44 17 5 0 0 0 2.3386E-09 3 13484 128 79.904 1 1.1915 1.3176 0 42022000 19056000 22966000 23938 1754 9035 9245 37513;37514;37515 37513 LSVACFYGGTPYGGQFER 18 0 1 Unmodified _LSVACFYGGTPYGGQFER_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1004.9668 2 1004.96472 2007.9149 61266.99 0.40085 0.00040284 -0.00066007 -6.6335E-07 0.40019 0.00040218 1005.46632499468 1009.96896593991 104.16 0.70753 104.16 103.87 104.58 -7.6294E-06 321 58 7 0 0 0 0.0010025 2 64217 38.189 32.91 1 0.96042 0.9862 0 25638000 11956000 13682000 23939 2065 9036 9246 37516;37517 37517 LSVACFYGGTPYGGQFER 18 0 1 Unmodified _LSVACFYGGTPYGGQFER_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1009.9688 2 1004.96472 2007.9149 60905.6 -0.072626 -7.2987E-05 0.388 0.00038993 0.31538 0.00031694 1005.46681455699 1010.47073367436 103.51 0.72196 103.51 103.17 103.89 0 319 60 8 0 0 0 0.00043855 1 65344 45.115 39.836 1 1.0023 1.0965 0 34061000 17555000 16506000 23940 2065 9036 9246 37518 37518 LSVACFYGGTPYGGQFER 18 0 1 Unmodified _LSVACFYGGTPYGGQFER_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1009.9698 2 1004.96472 2007.9149 59345.29 0.81169 0.00081572 0.13484 0.00013551 0.94654 0.00095124 1005.46647926457 1009.96912966118 115.72 0.57625 115.72 115.5 116.07 0 210 25 13 0 0 0 2.0628E-12 2 67872 111.12 96.24 1 1.1194 0.96346 0 54140000 25860000 28280000 23941 2065 9036 9246 37519;37520 37520 LSVACFYGGTPYGGQFER 18 0 1 Unmodified _LSVACFYGGTPYGGQFER_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1009.9705 2 1004.96472 2007.9149 59102.99 0.4007 0.00040269 0.0028001 2.814E-06 0.4035 0.00040551 1005.46627134667 1010.47043914091 115.58 0.65634 115.58 115.26 115.92 0 244 31 13 0 0 0 1.4504E-05 2 66774 76.588 63.388 1 1.2264 1.0698 0 41261000 18713000 22548000 23942 2065 9036 9246 37521;37522 37522 LSVASTPISQR 11 0 1 Unmodified _LSVASTPISQR_ 0 0 0 Q9BXS6;A8K4B4;H0YMD2 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8312 2 579.827495 1157.64044 81512.6 0.68632 0.00039795 -0.065041 -3.7712E-05 0.62128 0.00036024 579.827321207636 584.831277732622 51.253 0.42317 51.253 51.034 51.458 0 120 32 6 0 0 0 0.00020612 2 29017 92.538 54.235 1 0.38787 0.42547 0 40192000 29549000 10643000 23943 2014 9037 9247 37523;37524 37523 LSVASTPISQR 11 0 1 Unmodified _LSVASTPISQR_ 0 0 0 Q9BXS6;A8K4B4;H0YMD2 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.8273 2 579.827495 1157.64044 NaN NaN NaN -0.10382 -6.0198E-05 NaN NaN NaN NaN 60.203 0.67214 60.203 59.991 60.663 0 0 0 0 0.029609 1 30763 50.297 34.916 1 NaN NaN 0 3308800 3308800 0 23944 2014 9037 9247 37525 37525 LSVASTPISQR 11 0 1 Unmodified _LSVASTPISQR_ 0 0 0 Q9BXS6;A8K4B4;H0YMD2 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.832 2 579.827495 1157.64044 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.247 1 60.247 59.747 60.747 -3.8147E-06 0 0 0 0.01529 1 30830 55.649 23.016 1 23945 2014 9037 9247 37526 37526 LSVASTPISQR 11 0 1 Unmodified _LSVASTPISQR_ 0 0 0 Q9BXS6;A8K4B4;H0YMD2 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.8276 2 579.827495 1157.64044 83159.41 0.34775 0.00020163 0.20861 0.00012096 0.55635 0.00032259 579.827470781209 584.83161663832 60.644 0.97711 60.644 60.42 61.397 3.8147E-06 264 83 5 0 0 0 0.018273 2 30401 44.882 29.017 1 0.63908 0.56519 0 4026200 2441800 1584400 23946 2014 9037 9247 37527;37528 37528 LSVDEAVDVGLVNEELR 17 0 1 Unmodified _LSVDEAVDVGLVNEELR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 934.4874 2 928.983637 1855.95272 62250.15 0.55799 0.00051837 -0.76179 -0.00070769 -0.20379 -0.00018932 928.983204168422 934.488147120806 114.56 0.42438 114.56 114.35 114.77 0 83 29 5 0 0 0 7.8158E-05 1 72756 63.181 63.181 1 2.2528 2.2929 0 9890700 2838200 7052500 23947 397;1622 9038 9248 37529 37529 LSVDEAVDVGLVNEELR 17 0 1 Unmodified _LSVDEAVDVGLVNEELR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 928.9848 2 928.983637 1855.95272 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.6 1 114.6 114.1 115.1 0 0 0 0 0.00010773 1 72762 80.469 59.168 1 23948 397;1622 9038 9248 37530 37530 LSVDEAVDVGLVNEELR 17 0 1 Unmodified _LSVDEAVDVGLVNEELR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.9821 2 928.983637 1855.95272 63229.89 0.6042 0.00056129 -0.18753 -0.00017421 0.41667 0.00038708 928.983393772123 933.986933971159 114.06 0.44345 114.06 113.89 114.33 0 128 32 6 0 0 0 0.00011657 1 74116 58.32 58.32 1 1.7934 1.7606 0 14099000 5075300 9023800 23949 397;1622 9038 9248 37531 37531 LSVEEAVAAGVVGGEIQEK 19 1 0 Unmodified _LSVEEAVAAGVVGGEIQEK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.5004 2 942.999288 1883.98402 63178.21 0.5897 0.00055608 0.0063188 5.9587E-06 0.59601 0.00056204 942.999221251247 947.507865514393 108.14 0.83475 108.14 107.82 108.66 0 373 64 8 0 0 0 1.8627E-05 2 67364 63.037 63.037 1 2.2796 2.5772 0 84587000 25521000 59066000 23950 397;1622 9039 9249 37532;37533 37533 LSVEEAVAAGVVGGEIQEK 19 1 0 Unmodified _LSVEEAVAAGVVGGEIQEK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.0005 2 942.999288 1883.98402 63099.72 0.70697 0.00066668 -0.29148 -0.00027487 0.41549 0.00039181 943.500385299749 947.006079228012 107.59 0.78859 107.59 107.29 108.08 0 362 56 9 0 0 0 1.0551E-16 1 68624 117.2 109.84 1 2.1762 2.4445 0 74587000 25803000 48784000 23951 397;1622 9039 9249 37534 37534 LSVEEAVAAGVVGGEIQEK 19 1 0 Unmodified _LSVEEAVAAGVVGGEIQEK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 943.5023 2 942.999288 1883.98402 63269.26 0.86765 0.00081819 -0.7502 -0.00070744 0.11745 0.00011076 942.998828696492 947.507073336382 119.57 0.53869 119.57 119.31 119.85 0 132 24 8 0 0 0 2.9498E-05 1 70824 56.527 50.921 1 1.8872 1.5109 0 20774000 6384000 14390000 23952 397;1622 9039 9249 37535 37535 LSVEEAVAAGVVGGEIQEK 19 1 0 Unmodified _LSVEEAVAAGVVGGEIQEK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 942.9993 2 942.999288 1883.98402 63426.85 0.6326 0.00059654 -0.62936 -0.00059349 0.0032395 3.0548E-06 942.999296669077 947.506987874102 119.44 0.48836 119.44 119.17 119.65 0 132 22 8 0 0 0 0.00024436 1 69748 45.33 45.33 1 1.9272 1.548 0 15377000 4923500 10453000 23953 397;1622 9039 9249 37536 37536 LSVHFHPSVALFAK 14 1 0 Unmodified _LSVHFHPSVALFAK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.6273 3 518.292671 1551.85618 85921.71 0.25051 0.00012984 -0.50024 -0.00025927 -0.24974 -0.00012944 518.291740077844 520.963653435437 101.75 0.5745 101.75 101.52 102.09 7.6294E-06 170 38 6 0 0 0 0.002087 2 57633 41.499 41.499 1 1.2376 0.98602 0 9779000 4641100 5138000 23954 836;1683 9040 9250 37537;37538 37538 LSVHFHPSVALFAK 14 1 0 Unmodified _LSVHFHPSVALFAK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.2923 3 518.292671 1551.85618 83289.24 0.20235 0.00010488 0.15276 7.9172E-05 0.3551 0.00018405 518.292745686548 520.9642924065 101.12 0.70867 101.12 100.82 101.53 0 218 44 7 0 0 0 0.00082879 2 56344 48.405 48.405 1 1.1316 0.92339 0 6258200 2957900 3300300 23955 836;1683 9040 9250 37539;37540 37540 LSVISVEDPPQR 12 0 1 Unmodified _LSVISVEDPPQR_ 0 0 0 P38117 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.3645 2 670.364441 1338.71433 74506 0.77177 0.00051736 -0.047371 -3.1756E-05 0.72439 0.00048561 670.364845257676 675.368255126638 72.93 0.59069 72.93 72.657 73.247 0 162 49 5 0 0 0 0.00068455 2 43714 67.334 55.284 1 5.1133 5.4073 0 23596000 4877600 18718000 23956 1551 9041 9251 37541;37542 37541 LSVISVEDPPQR 12 0 1 Unmodified _LSVISVEDPPQR_ 0 0 0 P38117 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.3647 2 670.364441 1338.71433 75356 0.68995 0.00046252 -0.34768 -0.00023307 0.34227 0.00022945 670.364523388458 675.367813117205 84.64 0.51765 84.64 84.408 84.925 0 100 36 4 0 0 0 0.04643 1 45369 33.225 33.225 1 1.9254 1.7357 0 2058800 711000 1347800 23957 1551 9041 9251 37543 37543 LSVLIHNSDEHK 12 1 0 Unmodified _LSVLIHNSDEHK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 464.5808 3 464.580769 1390.72048 88022.53 0.14405 6.6921E-05 -0.059442 -2.7616E-05 0.084604 3.9306E-05 464.580780070078 467.252108007754 32.802 0.30543 32.802 32.655 32.961 0 65 12 10 0 0 0 0.0001339 2 13739 62.891 62.891 1 1.7687 1.4604 0 31142000 11321000 19820000 23958 2070;1136 9042 9252 37544;37545 37544 LSVLLCANADGSEK 14 1 0 Unmodified _LSVLLCANADGSEK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.8724 2 738.871773 1475.72899 70119.89 0.52243 0.00038601 -0.028492 -2.1052E-05 0.49394 0.00036496 739.373415215318 742.879240283199 77.128 0.68034 77.128 76.828 77.509 7.6294E-06 230 59 6 0 0 0 0.00021536 2 45397 67.153 61.181 1 1.0625 1.0794 0 13702000 7335500 6366900 23959 1450 9043 9253 37546;37547 37547 LSVLLCANADGSEK 14 1 0 Unmodified _LSVLLCANADGSEK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.3749 2 738.871773 1475.72899 70188.1 0.44501 0.00032881 0.070081 5.1781E-05 0.51509 0.00038059 738.871809011799 742.879399920213 76.15 0.69097 76.15 75.805 76.496 0 229 62 6 0 0 0 0.00022698 2 45788 65.5 61.483 1 0.96731 1.0443 0 21845000 10913000 10932000 23960 1450 9043 9253 37548;37549 37549 LSVLLCANADGSEK 14 1 0 Unmodified _LSVLLCANADGSEK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.8799 2 738.871773 1475.72899 69932.31 0.65163 0.00048147 -0.23339 -0.00017245 0.41824 0.00030902 738.871900153123 742.878829084212 87.821 1.1505 87.821 87.186 88.337 0 324 70 8 0 0 0 0.00079617 2 48203 58.274 58.274 1 1.7886 1.4273 0 9374100 3354700 6019400 23961 1450 9043 9253 37550;37551 37550 LSVLLCANADGSEK 14 1 0 Unmodified _LSVLLCANADGSEK_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.8732 2 738.871773 1475.72899 70010.98 0.6492 0.00047968 -0.21905 -0.00016185 0.43016 0.00031783 738.872019385263 742.878866729853 87.806 0.94793 87.806 87.341 88.289 0 331 55 9 0 0 0 0.00020564 2 47439 68.536 61.846 1 1.7449 1.4295 0 8659400 3345300 5314100 23962 1450 9043 9253 37552;37553 37553 LSVPTSDEEDEVPAPK 16 1 0 Unmodified _LSVPTSDEEDEVPAPK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8;A0PJ72;F5GYK6 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.4244 2 856.914889 1711.81523 68702.38 0.74151 0.00063541 -0.12306 -0.00010546 0.61845 0.00052996 856.915150119364 860.921691529082 73.039 0.35935 73.039 72.869 73.228 0 91 31 5 0 0 0 0.000151 2 42934 62.528 52.841 1 1.531 1.6113 0 16444000 7231500 9212500 23963 1926 9044 9254 37554;37555 37555 LSVPTSDEEDEVPAPK 16 1 0 Unmodified _LSVPTSDEEDEVPAPK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8;A0PJ72;F5GYK6 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.9211 2 856.914889 1711.81523 68134.52 0.40566 0.00034761 -0.10559 -9.0485E-05 0.30006 0.00025713 857.416384656249 860.921572891907 72.086 0.36462 72.086 71.883 72.248 0 78 32 4 0 0 0 0.00012766 3 43207 77.185 68.072 1 1.2178 1.2199 0 15736000 8447400 7288300 23964 1926 9044 9254 37556;37557;37558 37556 LSVSADLESR 10 0 1 Unmodified _LSVSADLESR_ 0 0 0 B4DRU9;A0A0S2Z5L1;Q9NUQ8 B4DRU9 B4DRU9 ABCF3 ATP-binding cassette sub-family F member 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.7813 2 538.782753 1075.55095 81397.34 0.56563 0.00030475 -0.12505 -6.7375E-05 0.44058 0.00023737 538.7822577741 543.786734994507 56.701 0.40257 56.701 56.511 56.913 0 107 36 4 0 0 0 0.010142 2 31993 53.756 24.868 1 1.8177 1.8503 0 9894800 3002400 6892400 23965 583 9045 9255 37559;37560 37559 LSVSADLESR 10 0 1 Unmodified _LSVSADLESR_ 0 0 0 B4DRU9;A0A0S2Z5L1;Q9NUQ8 B4DRU9 B4DRU9 ABCF3 ATP-binding cassette sub-family F member 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.7823 2 538.782753 1075.55095 81445.38 0.39203 0.00021122 0.13438 7.2401E-05 0.5264 0.00028362 538.782344782727 543.786874273655 55.848 0.49009 55.848 55.563 56.053 0 124 39 5 0 0 0 0.00084949 3 31991 80.231 43.674 1 1.4396 1.4523 0 10416000 4578000 5837700 23966 583 9045 9255 37561;37562;37563 37562 LSVYAALQR 9 0 1 Unmodified _LSVYAALQR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.7957 2 510.795466 1019.57638 86453.11 0.62432 0.0003189 -0.41798 -0.0002135 0.20635 0.0001054 510.795191601553 515.799459081735 75.318 0.76563 75.318 74.88 75.646 7.6294E-06 270 62 7 0 0 0 2.5049E-05 2 44206 113.89 51.23 1 2.043 2.2208 0 50571000 16295000 34276000 23967 1754 9046 9256 37564;37565 37564 LSVYAALQR 9 0 1 Unmodified _LSVYAALQR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.7952 2 510.795466 1019.57638 85091.48 0.41117 0.00021002 -0.4126 -0.00021076 -0.0014307 -7.3078E-07 510.795174838646 515.799443245463 74.044 0.67345 74.044 73.722 74.396 0 249 55 7 0 0 0 0.00024092 2 44579 105.04 53.61 1 1.8213 2.0382 0 44876000 13738000 31138000 23968 1754 9046 9256 37566;37567 37567 LSVYAALQR 9 0 1 Unmodified _LSVYAALQR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.7997 2 510.795466 1019.57638 NaN NaN NaN 0.31214 0.00015944 NaN NaN NaN NaN 86.02 0.75257 86.02 85.658 86.411 0 0 0 0 0.038893 1 46444 50.607 22.095 1 NaN NaN 0 2809600 0 2809600 23969 1754 9046 9256 37568 37568 LSVYQAMK 8 1 0 Oxidation (M) _LSVYQAM(ox)K_ LSVYQAM(1)K LSVYQAM(79.6)K 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2578 2 478.249503 954.484453 NaN NaN NaN 0.20488 9.7982E-05 NaN NaN NaN NaN 31.172 0.42725 31.172 30.878 31.306 -1.9073E-06 0 0 0 0.0027219 1 15313 79.597 53.86 1 NaN NaN 0 15571000 0 15571000 23970 1754 9047 9257 37569 37569 1615 LSYNVR 6 0 1 Unmodified _LSYNVR_ 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3;B5BU15 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6;SFRS6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 376.2085 2 376.208495 750.402438 100107.5 -0.095326 -3.5862E-05 -0.003021 -1.1365E-06 -0.098347 -3.6999E-05 376.208451539771 381.212544213552 29.69 0.38107 29.69 29.551 29.932 0 113 31 5 0 0 0 0.034509 1 14385 113.82 38.972 1 1.3355 1.4893 0 84278000 41174000 43104000 23971 748 9048 9258 37570 37570 LSYNVR 6 0 1 Unmodified _LSYNVR_ 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3;B5BU15 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6;SFRS6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 376.2082 2 376.208495 750.402438 96169.23 0.60462 0.00022746 -0.37103 -0.00013959 0.23359 8.7877E-05 376.208287961711 381.212418477142 29.219 0.40378 29.219 29.096 29.5 -1.9073E-06 107 29 6 0 0 0 0.034509 1 14033 113.82 38.972 1 1.3082 1.4892 0 110510000 45916000 64594000 23972 748 9048 9258 37571 37571 LSYPTFFPR 9 0 1 Unmodified _LSYPTFFPR_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;Q05DQ5;Q05DF7;Q05BZ6 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.2984 2 564.297842 1126.58113 83303.47 0.834 0.00047062 -0.1886 -0.00010643 0.6454 0.0003642 564.2977632136 569.301748389906 103.15 0.78594 103.15 102.77 103.55 0 195 67 5 0 0 0 0.024384 1 63505 48.283 40.063 1 0.45362 0.46347 0 14632000 9925800 4705900 23973 512 9049 9259 37572 37572 LSYPTFFPR 9 0 1 Unmodified _LSYPTFFPR_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;Q05DQ5;Q05DF7;Q05BZ6 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.803 2 564.297842 1126.58113 83002.88 1.0313 0.00058195 -0.57552 -0.00032476 0.45576 0.00025718 564.297593091237 569.301668443391 102.24 0.71056 102.24 101.99 102.7 0 150 54 4 0 0 0 0.0042156 2 64508 69.825 57.778 1 0.48053 0.47986 0 11547000 7805600 3741200 23974 512 9049 9259 37573;37574 37574 LSYTQLLR 8 0 1 Unmodified _LSYTQLLR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.2904 2 497.290017 992.565481 86920.41 0.34342 0.00017078 -0.23561 -0.00011716 0.10781 5.3612E-05 497.289882504179 502.293970215505 97.779 0.54729 97.779 97.527 98.074 0 153 38 6 0 0 0 0.014233 2 55045 63.48 25.064 1 2.309 1.9855 0 7720000 2192900 5527100 23975 1754 9050 9260 37575;37576 37576 LSYTQLLR 8 0 1 Unmodified _LSYTQLLR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.2901 2 497.290017 992.565481 87798.07 0.079988 3.9777E-05 0.1351 6.7184E-05 0.21509 0.00010696 497.290057060335 502.294142200839 97.627 0.53583 97.627 97.368 97.904 0 147 30 7 0 0 0 0.014233 2 54151 63.48 30.639 1 2.0722 1.7267 0 6346000 2363600 3982400 23976 1754 9050 9260 37577;37578 37578 LSYTVHSSIDSISMR 15 0 1 Unmodified _LSYTVHSSIDSISMR_ 0 0 0 E9PQ73;Q8TDW7 E9PQ73 E9PQ73 FAT3 Protocadherin Fat 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.95 3 565.950533 1694.82977 78972.05 0.72043 0.00040773 -0.35222 -0.00019934 0.36821 0.00020839 566.284591681474 569.286506914439 53.413 1.2097 53.413 52.988 54.198 0 598 95 10 0 0 0 0.0098022 1 29716 18.823 8.9014 1 1.5311 1.807 0 247700000 91621000 156080000 23977 1249 9051 9261 37579 37579 LSYTVHSSIDSISMR 15 0 1 Unmodified _LSYTVHSSIDSISMR_ 0 0 0 E9PQ73;Q8TDW7 E9PQ73 E9PQ73 FAT3 Protocadherin Fat 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.9242 2 848.422162 1694.82977 66414.03 0.87978 0.00074643 -0.36744 -0.00031174 0.51235 0.00043469 848.421633189705 853.425927292811 53.426 0.52374 53.426 53.216 53.74 0 142 39 6 0 0 0 0.027872 1 29967 28.204 28.204 1 1.563 1.7311 0 63066000 25907000 37159000 23978 1249 9051 9261 37580 37580 LSYTVHSSIDSISMR 15 0 1 Unmodified _LSYTVHSSIDSISMR_ 0 0 0 E9PQ73;Q8TDW7 E9PQ73 E9PQ73 FAT3 Protocadherin Fat 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.9508 3 565.950533 1694.82977 78049.58 0.77004 0.0004358 -0.40062 -0.00022673 0.36942 0.00020907 565.950474199831 569.286462560995 52.287 0.99866 52.287 51.938 52.936 -3.8147E-06 517 77 9 0 0 0 0.00081609 1 29641 33.204 33.204 1 1.4418 1.6594 0 212030000 83030000 129000000 23979 1249 9051 9261 37581 37581 LSYTVHSSIDSISMR 15 0 1 Unmodified _LSYTVHSSIDSISMR_ 0 0 0 E9PQ73;Q8TDW7 E9PQ73 E9PQ73 FAT3 Protocadherin Fat 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.4257 2 848.422162 1694.82977 65556.94 0.82506 0.0007 -0.33759 -0.00028642 0.48747 0.00041358 848.421459757103 853.426385492377 52.432 0.67448 52.432 52.069 52.744 0 213 50 7 0 0 0 0.013171 2 29725 33.866 33.866 1 1.3857 1.534 0 42271000 17377000 24894000 23980 1249 9051 9261 37582;37583 37583 LSYTVHSSIDSISMR 15 0 1 Unmodified _LSYTVHSSIDSISMR_ 0 0 0 E9PQ73;Q8TDW7 E9PQ73 E9PQ73 FAT3 Protocadherin Fat 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.2842 3 565.950533 1694.82977 79810.37 0.3886 0.00021993 -0.22892 -0.00012956 0.15967 9.0367E-05 565.950483459313 569.286637159794 62.655 0.65637 62.655 62.369 63.025 0 262 54 7 0 0 0 0.010306 2 32224 18.596 18.596 1 2.5492 2.1939 0 7174200 2016400 5157800 23981 1249 9051 9261 37584;37585 37585 LSYTVHSSIDSISMR 15 0 1 Unmodified _LSYTVHSSIDSISMR_ 0 0 0 E9PQ73;Q8TDW7 E9PQ73 E9PQ73 FAT3 Protocadherin Fat 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.2847 3 565.950533 1694.82977 80891.77 0.29925 0.00016936 -0.1731 -9.7963E-05 0.12616 7.1399E-05 565.950348169145 569.286576705391 63.11 0.62019 63.11 62.823 63.443 0 217 53 6 0 0 0 0.0098022 3 31755 18.096 18.096 1 2.7857 2.3187 0 7194300 1619600 5574700 23982 1249 9051 9261 37586;37587;37588 37586 LSYVGNNFGTGALK 14 1 0 Unmodified _LSYVGNNFGTGALK_ 0 0 0 Q9GZS1;E7EX70;B4DW33 Q9GZS1 Q9GZS1 POLR1E DNA-directed RNA polymerase I subunit RPA49 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.886 2 720.877716 1439.74088 71364.15 0.88711 0.0006395 0.12346 8.8997E-05 1.0106 0.0007285 721.379019145181 724.884882801463 81.843 0.53108 81.843 81.633 82.164 0 134 45 4 0 0 0 0.00012516 1 48847 80.979 80.979 1 0.85728 0.89632 0 15092000 6865700 8226200 23983 2022 9052 9262 37589 37589 LSYVGNNFGTGALK 14 1 0 Unmodified _LSYVGNNFGTGALK_ 0 0 0 Q9GZS1;E7EX70;B4DW33 Q9GZS1 Q9GZS1 POLR1E DNA-directed RNA polymerase I subunit RPA49 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.8843 2 720.877716 1439.74088 70711.46 0.91693 0.00066099 0.95397 0.00068769 1.8709 0.0013487 720.878167938497 724.885825935321 80.882 0.46729 80.882 80.677 81.144 0 115 38 4 0 0 0 6.1626E-05 1 49302 91.313 91.313 1 0.80615 0.81271 0 13365000 8092100 5272800 23984 2022 9052 9262 37590 37590 LSYYGLR 7 0 1 Unmodified _LSYYGLR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6;H7BZ82 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 436.2375 2 436.237253 870.459953 92474.69 -0.04624 -2.0172E-05 0.37118 0.00016192 0.32494 0.00014175 436.237238531623 441.241439734153 69.064 0.92522 69.064 68.692 69.617 7.6294E-06 226 64 6 0 0 0 0.044796 2 35283 57.463 23.725 1 1.1519 0.95535 0 7791000 3592900 4198100 23985 1679 9053 9263 37591;37592 37591 LTADPGGSSETSSQVLENHTK 21 1 0 Unmodified _LTADPGGSSETSSQVLENHTK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPJ1;D2CPJ9;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3494 3 720.013466 2157.01857 71388.48 0.51553 0.00037119 0.47074 0.00033894 0.98628 0.00071013 720.348126894307 722.68523059023 43.283 0.50665 43.283 43.038 43.545 0 280 41 9 0 0 0 9.7458E-12 2 23064 95.206 95.206 1 0.59547 0.6488 0 49574000 32940000 16634000 23986 118;1184 9054 9264 37593;37594 37594 LTADPGGSSETSSQVLENHTK 21 1 0 Unmodified _LTADPGGSSETSSQVLENHTK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPJ1;D2CPJ9;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.0192 3 720.013466 2157.01857 70894.92 0.84603 0.00060915 0.5116 0.00036836 1.3576 0.00097751 720.013374208496 722.684753426579 42.404 0.62046 42.404 42.049 42.67 0 239 53 7 0 0 0 1.0487E-11 2 22838 94.837 94.837 1 0.56541 0.63386 0 79474000 48448000 31026000 23987 118;1184 9054 9264 37595;37596 37596 LTADPGGSSETSSQVLENHTK 21 1 0 Unmodified _LTADPGGSSETSSQVLENHTK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPJ1;D2CPJ9;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.6855 3 720.013466 2157.01857 70171.54 0.49522 0.00035656 0.2753 0.00019822 0.77052 0.00055478 720.347840136833 722.684997342729 50.973 0.66906 50.973 50.647 51.316 3.8147E-06 292 44 10 0 0 0 0.0012612 2 25107 28.765 28.765 1 1.0148 0.79501 0 11584000 5748700 5834900 23988 118;1184 9054 9264 37597;37598 37598 LTADPGGSSETSSQVLENHTK 21 1 0 Unmodified _LTADPGGSSETSSQVLENHTK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPJ1;D2CPJ9;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.019 3 720.013466 2157.01857 71377.02 0.44367 0.00031945 0.23885 0.00017197 0.68252 0.00049142 720.34860119038 722.684897511243 51.554 0.69049 51.554 51.292 51.982 0 299 48 9 0 0 0 3.8011E-07 2 24780 51.524 51.524 1 0.90658 0.7467 0 10585000 5267300 5318000 23989 118;1184 9054 9264 37599;37600 37600 LTAEAIQTPLK 11 1 0 Unmodified _LTAEAIQTPLK_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8494 2 592.847896 1183.68124 78805.59 0.74537 0.00044189 0.3514 0.00020833 1.0968 0.00065022 592.84812177204 596.855075017446 72.03 1.1587 72.03 71.478 72.637 0 585 92 9 0 0 0 7.2354E-23 2 41904 167.12 150.35 1 1.0162 1.1602 0 179130000 92867000 86266000 23990 1789 9055 9265 37601;37602 37601 LTAEAIQTPLK 11 1 0 Unmodified _LTAEAIQTPLK_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.8487 2 592.847896 1183.68124 78856.63 0.68909 0.00040853 0.0089717 5.3188E-06 0.69807 0.00041385 592.848067940681 596.854966189996 70.855 1.4828 70.855 70.213 71.696 0 657 114 8 0 0 0 6.3339E-17 3 42134 157.66 132.67 1 1.0717 1.2486 0 249130000 122140000 126990000 23991 1789 9055 9265 37603;37604;37605 37603 LTAEAIQTPLK 11 1 0 Unmodified _LTAEAIQTPLK_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.8485 2 592.847896 1183.68124 78338.17 0.4837 0.00028676 -0.065775 -3.8995E-05 0.41792 0.00024777 592.848224620804 596.855107677635 82.362 1.3991 82.362 81.894 83.293 0 568 85 9 0 0 0 0.00041914 2 44637 79.974 71.754 1 1.6253 1.3819 0 62255000 24779000 37477000 23992 1789 9055 9265 37606;37607 37607 LTAEAIQTPLK 11 1 0 Unmodified _LTAEAIQTPLK_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.8481 2 592.847896 1183.68124 78735.55 0.45645 0.0002706 -0.21874 -0.00012968 0.2377 0.00014092 592.848211337045 596.85509911599 82.538 1.622 82.538 81.844 83.466 0 586 95 10 0 0 0 2.3128E-05 2 43885 103.7 95.48 1 1.7708 1.4925 0 53876000 21289000 32586000 23993 1789 9055 9265 37608;37609 37608 LTAEDLFEAR 10 0 1 Unmodified _LTAEDLFEAR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.8024 2 582.798403 1163.58225 79523.66 0.61315 0.00035734 0.036448 2.1242E-05 0.6496 0.00037859 582.798595653984 587.802440519237 92.383 0.84866 92.383 92.069 92.917 0 380 81 7 0 0 0 4.0841E-12 2 55920 145.72 83.761 1 1.6602 1.8546 0 86496000 30229000 56267000 23994 1754 9056 9266 37610;37611 37610 LTAEDLFEAR 10 0 1 Unmodified _LTAEDLFEAR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8026 2 582.798403 1163.58225 78518.52 0.80638 0.00046996 -0.13872 -8.0846E-05 0.66766 0.00038911 582.798518775299 587.802471446387 91.554 0.85219 91.554 91.254 92.106 -7.6294E-06 397 74 8 0 0 0 6.0635E-12 2 56650 143.37 92.028 1 1.7102 1.946 0 114020000 40098000 73923000 23995 1754 9056 9266 37612;37613 37612 LTAEDLFEAR 10 0 1 Unmodified _LTAEDLFEAR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.988 2 582.798403 1163.58225 81412.89 0.59576 0.00034721 -0.056394 -3.2866E-05 0.53936 0.00031434 582.798650978853 587.802339187171 105.41 0.68771 105.41 105.06 105.75 0 175 45 5 0 0 0 0.045683 1 60041 61.65 29.715 1 2.2106 1.89 0 5855000 2094300 3760700 23996 1754 9056 9266 37614 37614 LTAEDLFEAR 10 0 1 Unmodified _LTAEDLFEAR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.8028 2 582.798403 1163.58225 82666.11 0.49604 0.00028909 0.13423 7.8227E-05 0.63027 0.00036732 582.798951735705 587.802365906986 105.32 0.78521 105.32 104.9 105.69 0 186 54 5 0 0 0 1.444E-05 2 59214 101.9 52.478 1 2.215 1.8406 0 5961100 1800300 4160800 23997 1754 9056 9266 37615;37616 37616 LTAEFEEAQTSACR 14 0 1 Unmodified _LTAEFEEAQTSACR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;B3KSG1;A0A087WU26 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.3769 2 806.867219 1611.71989 67507.99 0.93808 0.00075691 0.012668 1.0221E-05 0.95075 0.00076713 806.867357313149 812.373224633888 53.426 0.22979 53.426 53.352 53.582 0 46 17 4 0 0 0 0.00024168 2 29908 63.408 53.721 1 0.98942 0.99377 0 9210100 5822300 3387800 23998 471 9057 9267 37617;37618 37618 LTAEFEEAQTSACR 14 0 1 Unmodified _LTAEFEEAQTSACR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;B3KSG1;A0A087WU26 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.8722 2 806.867219 1611.71989 70273.86 0.82448 0.00066525 0.088386 7.1315E-05 0.91287 0.00073656 806.867474941764 811.871127394293 52.442 0.31849 52.442 52.303 52.622 0 68 24 4 0 0 0 0.0031029 1 29981 47.712 41.179 1 1.0053 0.99897 0 8599300 2483800 6115500 23999 471 9057 9267 37619 37619 LTAELIEQAAQYTNAVR 17 0 1 Unmodified _LTAELIEQAAQYTNAVR_ 0 0 0 Q53G61;Q53G21;P09661;H0YKK0;Q6NVW9;Q9UEN1;O95485 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 946.0001 2 945.999622 1889.98469 60248.48 0.78176 0.00073955 0.16278 0.00015399 0.94454 0.00089354 945.999307616721 951.004009605673 125.57 0.46315 125.57 125.41 125.87 0 76 18 6 0 0 0 0.00083091 1 75453 45.115 45.115 1 1.1485 0.97785 0 5447800 2305000 3142800 24000 1461 9058 9268 37620 37620 LTAELIEQAAQYTNAVR 17 0 1 Unmodified _LTAELIEQAAQYTNAVR_ 0 0 0 Q53G61;Q53G21;P09661;H0YKK0;Q6NVW9;Q9UEN1;O95485 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 946.5041 2 945.999622 1889.98469 62236.68 0.70735 0.00066915 -2.7845 -0.0026342 -2.0772 -0.001965 945.999189144116 951.505518503428 125.47 0.54897 125.47 125.25 125.8 0 84 24 8 0 0 0 0.00012829 1 74434 57.106 48.766 1 1.0798 0.92974 0 3382600 1690400 1692200 24001 1461 9058 9268 37621 37621 LTAIDILTTCAADIQR 16 0 1 Unmodified _LTAIDILTTCAADIQR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.9734 2 887.972019 1773.92948 63583.7 0.79192 0.00070321 0.071171 6.3197E-05 0.86309 0.0007664 887.971945979339 892.976760624629 120.06 0.47624 120.06 119.83 120.31 -7.6294E-06 166 32 6 0 0 0 2.6335E-17 3 77256 125.54 125.54 1 0.9179 0.94528 0 24717000 12059000 12658000 24002 1411 9059 9269 37622;37623;37624 37623 LTAIDILTTCAADIQR 16 0 1 Unmodified _LTAIDILTTCAADIQR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.4723 2 887.972019 1773.92948 64505.53 0.6474 0.00057488 0.031538 2.8004E-05 0.67894 0.00060288 887.971887431721 892.976802324687 119.6 0.53018 119.6 119.37 119.9 0 207 38 8 0 0 0 4.1904E-09 3 79010 110.31 110.31 1 0.81877 0.87563 0 24939000 14285000 10654000 24003 1411 9059 9269 37625;37626;37627 37627 LTAIIEEAEEAPGAR 15 0 1 Unmodified _LTAIIEEAEEAPGAR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.4142 2 785.409577 1568.8046 NaN NaN NaN 0.87003 0.00068333 NaN NaN NaN NaN 83.746 0.53137 83.746 83.42 83.952 0 0 0 0 3.6272E-16 2 49975 127.87 93.662 1 NaN NaN 0 7381900 0 7381900 24004 397;1622 9060 9270 37628;37629 37628 LTAIIEEAEEAPGAR 15 0 1 Unmodified _LTAIIEEAEEAPGAR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.4151 2 785.409577 1568.8046 NaN NaN NaN 0.67478 0.00052998 NaN NaN NaN NaN 82.697 0.64771 82.697 82.467 83.115 0 0 0 0 1.32E-10 1 50515 113.22 77.713 1 NaN NaN 0 13008000 0 13008000 24005 397;1622 9060 9270 37630 37630 LTAIIEEAEEAPGAR 15 0 1 Unmodified _LTAIIEEAEEAPGAR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.4082 2 785.409577 1568.8046 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.796 1 82.796 82.296 83.296 0 0 0 0 2.2171E-11 1 50688 113.38 85.202 1 24006 397;1622 9060 9270 37631 37631 LTAIIEEAEEAPGARPQLQDAWR 23 0 2 Unmodified _LTAIIEEAEEAPGARPQLQDAWR_ 0 0 1 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.4463 3 855.441631 2563.30306 65650.24 0.9344 0.00079932 -0.13673 -0.00011696 0.79767 0.00068236 855.77593316606 862.447929833383 103.19 0.73266 103.19 102.87 103.61 0 373 61 8 0 0 0 2.4049E-09 1 63490 73.405 73.405 1 2.0421 2.2206 0 49661000 16311000 33350000 24007 397;1622 9061 9271 37632 37632 LTAIIEEAEEAPGARPQLQDAWR 23 0 2 Unmodified _LTAIIEEAEEAPGARPQLQDAWR_ 0 0 1 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.1168 3 855.441631 2563.30306 65503.84 1.1205 0.00095851 -0.45826 -0.00039201 0.66223 0.0005665 855.7754335701 862.447752478125 102.43 0.71812 102.43 102.12 102.84 0 339 57 8 0 0 0 4.9213E-09 1 64469 68.88 68.88 1 1.8127 2.085 0 57899000 20457000 37442000 24008 397;1622 9061 9271 37633 37633 LTAIIEEAEEAPGARPQLQDAWR 23 0 2 Unmodified _LTAIIEEAEEAPGARPQLQDAWR_ 0 0 1 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 862.1147 3 855.441631 2563.30306 65104.72 0.86224 0.0007376 0.21882 0.00018719 1.0811 0.00092479 855.775725193882 862.448097235042 114.61 0.6698 114.61 114.28 114.95 -7.6294E-06 120 29 8 0 0 0 4.8208E-08 2 66944 55.734 55.734 1 1.8647 1.5785 0 9184200 2808500 6375700 24009 397;1622 9061 9271 37634;37635 37635 LTAIIEEAEEAPGARPQLQDAWR 23 0 2 Unmodified _LTAIIEEAEEAPGARPQLQDAWR_ 0 0 1 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 862.4475 3 855.441631 2563.30306 65002.47 0.67284 0.00057557 -0.051452 -4.4014E-05 0.62139 0.00053156 855.775957228527 862.113710714591 114.53 0.53674 114.53 114.33 114.87 0 135 23 9 0 0 0 4.9213E-09 2 65927 68.88 68.88 1 1.4297 1.2978 0 5851700 2133400 3718300 24010 397;1622 9061 9271 37636;37637 37636 LTAQVEELSK 10 1 0 Unmodified _LTAQVEELSK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0 A0A024R5M9 A0A024R5M9 NUMA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.3089 2 559.308603 1116.60265 83005.2 1.2824 0.00071728 -0.58164 -0.00032531 0.7008 0.00039196 559.308377602236 563.315299265436 49.919 0.3925 49.919 49.685 50.077 0 116 31 5 0 0 0 0.00078545 2 27467 81.263 58.483 1 1.0221 1.0358 0 27674000 12850000 14823000 24011 186 9062 9272 37638;37639 37638 LTAQVEELSK 10 1 0 Unmodified _LTAQVEELSK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0 A0A024R5M9 A0A024R5M9 NUMA1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.317 2 559.308603 1116.60265 NaN NaN NaN 0.1768 9.8888E-05 NaN NaN NaN NaN 48.544 0.42229 48.544 48.391 48.813 0 0 0 0 0.0040511 1 27179 74.165 34.098 1 NaN NaN 0 15098000 0 15098000 24012 186 9062 9272 37640 37640 LTAQVEELSK 10 1 0 Unmodified _LTAQVEELSK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0 A0A024R5M9 A0A024R5M9 NUMA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.3162 2 559.308603 1116.60265 81179.92 0.62353 0.00034875 -0.10639 -5.9505E-05 0.51714 0.00028924 559.30765188728 563.315837181757 57.545 0.49305 57.545 57.363 57.856 0 118 35 4 0 0 0 0.0052581 2 29190 60.398 37.124 1 2.5563 2.0271 0 4383800 1181100 3202700 24013 186 9062 9272 37641;37642 37641 LTAQVEELSK 10 1 0 Unmodified _LTAQVEELSK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0 A0A024R5M9 A0A024R5M9 NUMA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.3163 2 559.308603 1116.60265 82176.27 0.57381 0.00032093 -0.47471 -0.00026551 0.0991 5.5427E-05 559.308168597672 563.315512870206 57.919 0.59547 57.919 57.755 58.35 3.8147E-06 145 43 4 0 0 0 0.0044036 2 28736 61.56 37.405 1 1.85 1.4509 0 3798900 1168400 2630500 24014 186 9062 9272 37643;37644 37643 LTAQVEQLEVFQR 13 0 1 Unmodified _LTAQVEQLEVFQR_ 0 0 0 Q4LE64;Q14980 Q4LE64 Q4LE64 NUMA1 variant protein;NUMA1 Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.9277 2 780.922655 1559.83076 NaN NaN NaN 2.3841 0.0018618 NaN NaN NaN NaN 95.851 0.41062 95.851 95.679 96.09 0 0 0 0 1.0871E-05 1 59823 97.734 67.121 1 NaN NaN 0 7040400 0 7040400 24015 1747 9063 9273 37645 37645 LTAQVEQLEVFQR 13 0 1 Unmodified _LTAQVEQLEVFQR_ 0 0 0 Q4LE64;Q14980 Q4LE64 Q4LE64 NUMA1 variant protein;NUMA1 Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.9238 2 780.922655 1559.83076 68907.57 0.74294 0.00058018 -0.15637 -0.00012211 0.58657 0.00045807 780.922588572887 785.926690421722 109.72 0.52418 109.72 109.5 110.03 7.6294E-06 149 25 8 0 0 0 0.00011751 2 63294 91.123 77.531 1 1.2528 1.0333 0 18664000 7799200 10865000 24016 1747 9063 9273 37646;37647 37647 LTAQVEQLEVFQR 13 0 1 Unmodified _LTAQVEQLEVFQR_ 0 0 0 Q4LE64;Q14980 Q4LE64 Q4LE64 NUMA1 variant protein;NUMA1 Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 785.9282 2 780.922655 1559.83076 69941.66 0.77169 0.00060263 -0.13076 -0.00010211 0.64094 0.00050052 780.92250106103 785.926737943017 109.64 0.53336 109.64 109.38 109.91 -7.6294E-06 142 25 8 0 0 0 0.00055246 2 62187 61.435 51.286 1 1.1593 0.93752 0 11593000 5319800 6273300 24017 1747 9063 9273 37648;37649 37648 LTATPTPLGGMTGFHMQTEDR 21 0 1 2 Oxidation (M) _LTATPTPLGGM(ox)TGFHM(ox)QTEDR_ LTATPTPLGGM(1)TGFHM(1)QTEDR LTATPTPLGGM(49.97)TGFHM(49.97)QTEDR 0 2 0 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.3602 3 765.024432 2292.05147 NaN NaN NaN -0.028186 -2.1563E-05 NaN NaN NaN NaN 64.048 0.51241 64.048 63.796 64.308 0 0 0 0 5.0305E-05 1 36749 49.973 45.263 1 NaN NaN 0 8748500 0 8748500 24018 1408 9064 9274 37650 37650 1086;1087 LTAYAMTIPFVR 12 0 1 Oxidation (M) _LTAYAM(ox)TIPFVR_ LTAYAM(1)TIPFVR LTAYAM(45.37)TIPFVR 0 1 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.3815 2 699.87613 1397.73771 NaN NaN NaN -0.064766 -4.5328E-05 NaN NaN NaN NaN 102.34 0.5815 102.34 102.12 102.7 -7.6294E-06 0 0 0 0.011199 1 62965 45.368 32.578 1 NaN NaN 0 5906200 0 5906200 24019 1228 9065 9275 37651 37651 942 LTCLGVWLDK 10 1 0 Unmodified _LTCLGVWLDK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.8248 2 602.823366 1203.63218 77912.4 0.91432 0.00055117 0.34707 0.00020922 1.2614 0.0007604 602.823628059651 606.830744330756 102.12 0.9903 102.12 101.74 102.74 -7.6294E-06 291 80 6 0 0 0 0.0043374 1 63061 61.65 61.65 1 0.74285 0.73033 0 23572000 11668000 11905000 24020 580 9066 9276 37652 37652 LTCLGVWLDK 10 1 0 Unmodified _LTCLGVWLDK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.8242 2 602.823366 1203.63218 77669.07 0.67131 0.00040468 0.41616 0.00025087 1.0875 0.00065555 602.823794894308 606.831006564395 101.35 1.1218 101.35 100.81 101.94 7.6294E-06 294 88 6 0 0 0 0.0039245 1 63700 62.303 62.303 1 0.96534 1.04 0 22700000 10798000 11902000 24021 580 9066 9276 37653 37653 LTCLGVWLDK 10 1 0 Unmodified _LTCLGVWLDK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8238 2 602.823366 1203.63218 77716.6 0.88562 0.00053387 0.40154 0.00024206 1.2872 0.00077593 602.82396188079 606.830579118998 114.42 0.94753 114.42 114.02 114.97 7.6294E-06 169 41 7 0 0 0 0.011848 2 66776 51.436 51.436 1 1.1897 0.94482 0 6520300 2474700 4045600 24022 580 9066 9276 37654;37655 37655 LTCLGVWLDK 10 1 0 Unmodified _LTCLGVWLDK_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.8236 2 602.823366 1203.63218 77860.41 0.68229 0.0004113 0.27266 0.00016437 0.95495 0.00057567 602.823784655288 606.830603592993 114.25 0.96188 114.25 113.85 114.81 -7.6294E-06 142 40 6 0 0 0 0.011848 1 65713 51.436 51.436 1 1.1337 0.92421 0 6555900 2683500 3872400 24023 580 9066 9276 37656 37656 LTDAQILTR 9 0 1 Unmodified _LTDAQILTR_ 0 0 0 Q75MT5;B5BUD2;P35250;A0A087WVY3;H7C5P4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.8024 2 515.798206 1029.58186 85409.66 0.53464 0.00027577 -0.11795 -6.0836E-05 0.41669 0.00021493 515.798178420324 520.802211729961 55.68 0.53685 55.68 55.378 55.915 0 147 42 6 0 0 0 0.0059592 1 31202 65.404 41.611 1 0.85109 0.87898 0 20086000 10175000 9911000 24024 1079 9067 9277 37657 37657 LTDAQILTR 9 0 1 Unmodified _LTDAQILTR_ 0 0 0 Q75MT5;B5BUD2;P35250;A0A087WVY3;H7C5P4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.7983 2 515.798206 1029.58186 NaN NaN NaN -0.59988 -0.00030942 NaN NaN NaN NaN 54.644 0.59272 54.644 54.344 54.937 0 0 0 0 2.0923E-05 1 31247 110.87 44.799 1 NaN NaN 0 16603000 16603000 0 24025 1079 9067 9277 37658 37658 LTDAQILTR 9 0 1 Unmodified _LTDAQILTR_ 0 0 0 Q75MT5;B5BUD2;P35250;A0A087WVY3;H7C5P4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.8024 2 515.798206 1029.58186 86633.29 0.25902 0.0001336 0.20275 0.00010458 0.46177 0.00023818 515.798361060051 520.802231704688 64.463 0.60359 64.463 64.127 64.73 0 152 43 4 0 0 0 0.032534 1 33138 45.022 22.282 1 1.0857 0.94319 0 2246400 1051500 1194900 24026 1079 9067 9277 37659 37659 LTDAQILTR 9 0 1 Unmodified _LTDAQILTR_ 0 0 0 Q75MT5;B5BUD2;P35250;A0A087WVY3;H7C5P4 Q75MT5 Q75MT5 RFC2 Replication factor C subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.7986 2 515.798206 1029.58186 88287.09 0.091498 4.7195E-05 0.33502 0.0001728 0.42652 0.00022 515.798476196149 520.802379829651 64.908 0.78432 64.908 64.57 65.354 0 228 61 5 0 0 0 0.028936 2 32728 46.462 28.484 1 0.91595 0.8174 0 1961600 965980 995570 24027 1079 9067 9277 37660;37661 37661 LTDCVVMRDPASK 13 1 1 Oxidation (M) _LTDCVVM(ox)RDPASK_ LTDCVVM(1)RDPASK LTDCVVM(59.23)RDPASK 0 1 1 P22626;A0A087WUI2;I6L957 P22626 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.2537 3 503.246293 1506.71705 NaN NaN NaN -0.48412 -0.00024363 NaN NaN NaN NaN 27.828 0.34414 27.828 27.682 28.026 0 0 0 0 0.0022992 2 12935 59.227 37.976 1 NaN NaN 0 32532000 0 32532000 24028 1508 9068 9278 37662;37663 37662 1277 LTDCVVMRDPASK 13 1 1 Oxidation (M) _LTDCVVM(ox)RDPASK_ LTDCVVM(1)RDPASK LTDCVVM(45.99)RDPASK 0 1 1 P22626;A0A087WUI2;I6L957 P22626 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2539 3 503.246293 1506.71705 83602.15 0.22383 0.00011264 0.027956 1.4069E-05 0.25179 0.00012671 503.247266326488 509.2537265357 27.258 0.5182 27.258 26.883 27.401 0 92 25 7 0 0 0 0.0016598 1 12521 45.992 40.269 1 4.6549 5.4135 0 40385000 6673600 33712000 24029 1508 9068 9278 37664 37664 1277 LTDEQVALVR 10 0 1 Unmodified _LTDEQVALVR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.3254 2 572.322045 1142.62954 79330.73 0.67517 0.00038641 -1.0405 -0.00059551 -0.36535 -0.0002091 572.321853740146 577.324947763978 60.61 0.77436 60.61 60.389 61.163 3.8147E-06 264 62 6 0 0 0 2.1517E-65 1 34539 221.94 159.28 1 0.89455 1.0495 0 218940000 117620000 101320000 24030 1726 9069 9279 37665 37665 LTDEQVALVR 10 0 1 Unmodified _LTDEQVALVR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.325 2 572.322045 1142.62954 78868.74 0.60562 0.00034661 -0.97696 -0.00055914 -0.37135 -0.00021253 572.321979706137 577.324919238827 59.402 0.85149 59.402 59.185 60.036 -3.8147E-06 297 75 6 0 0 0 2.3239E-22 1 34527 168.27 129.3 1 0.79222 0.91886 0 316220000 169630000 146590000 24031 1726 9069 9279 37666 37666 LTDFGFCAQITPEQSK 16 1 0 Unmodified _LTDFGFCAQITPEQSK_ 0 0 0 A8K5M4;Q9Y6B5;Q13177;H7C1X3;H0YCG5;B7Z302;E9PM17;B7Z3K0;B3KNX7;A0A024R5P0;A8KAN3;Q13153;Q59FN2;A0A087X294;B2RCU6;O75914 A8K5M4 A8K5M4 PAK2;PAK1;PAK3 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 1;Serine/threonine-protein kinase PAK 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.4431 2 921.440551 1840.86655 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.576 1 97.576 97.076 98.076 0 0 0 0 0.00075287 1 60978 58.098 37.321 1 24032 750 9070 9280 37667 37667 LTDFGLSK 8 1 0 Unmodified _LTDFGLSK_ 0 0 0 B4DKZ2;B4DG22;B7ZB17;P51812;B1AXG1;B7Z2K7;Q9UK32;B3KU51;B4DMN4;E7ERL6;A0JLR0;B4DS23;B4DSE5;B4DKT8;E7EWQ5;J3QT34;O60307;Q9Y2H9;O15021;E9PGT3;Q15418;Q96GX5 B4DKZ2;E9PGT3;Q96GX5 B4DKZ2 RPS6KA3;RPS6KA6;MAST2;MAST4;MAST3;MAST1;RPS6KA1;MASTL Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-6;Microtubule-associated serine/threonine-protein kinase 3;Microtubule-associated serine/threonine-protein kinase 1;Microtubule-associated serine/threonine-protein kinase 4;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Serine/threonine-protein kinase greatwall ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 444.7499 2 440.742368 879.470183 NaN NaN NaN -0.5513 -0.00024298 NaN NaN NaN NaN 58.685 0.52412 58.685 58.428 58.953 3.8147E-06 0 0 0 0.034005 1 34098 56.81 0 1 NaN NaN 0 8199600 0 8199600 24033 971;1235;1969 9071 9281 37668 37668 LTDFYPVR 8 0 1 Unmodified _LTDFYPVR_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.7733 2 505.768917 1009.52328 86439.38 0.34745 0.00017573 0.24822 0.00012554 0.59566 0.00030127 505.768965653687 510.773200153086 71.562 0.4595 71.562 71.347 71.806 0 136 40 6 0 0 0 0.0078606 1 41708 81.119 56.916 1 1.8996 1.9562 0 14125000 5016300 9109100 24034 505 9072 9282 37669 37669 LTDFYPVR 8 0 1 Unmodified _LTDFYPVR_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.7683 2 505.768917 1009.52328 85352 0.2335 0.0001181 0.43684 0.00022094 0.67034 0.00033904 505.768859686102 510.773177522208 70.174 0.50745 70.174 70.003 70.51 0 149 42 6 0 0 0 0.0083247 1 41868 79.116 45.378 1 1.8946 2.0354 0 25525000 7651900 17873000 24035 505 9072 9282 37670 37670 LTDFYPVR 8 0 1 Unmodified _LTDFYPVR_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.7735 2 505.768917 1009.52328 80868.48 0.38588 0.00019516 1.107 0.00055987 1.4929 0.00075504 506.270129839304 510.773184716563 81.728 0.39062 81.728 81.534 81.924 0 66 19 5 0 0 0 0.028561 1 43521 53.166 32.612 1 3.0873 2.6991 0 1399800 468570 931260 24036 505 9072 9282 37671 37671 LTDISVTDPEK 11 1 0 Unmodified _LTDISVTDPEK_ 0 0 0 Q9Y333 Q9Y333 Q9Y333 LSM2 U6 snRNA-associated Sm-like protein LSm2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.3171 2 609.316625 1216.6187 81012.49 0.34301 0.000209 0.5424 0.00033049 0.88541 0.00053949 609.316227186265 613.324284481071 56.149 0.4957 56.149 55.944 56.44 0 78 38 4 0 0 0 0.0005685 1 32308 74.162 74.162 1 2.043 2.0311 0 6202200 2348300 3853900 24037 2131 9073 9283 37672 37672 LTEEETVCLDLDK 13 1 0 Unmodified _LTEEETVCLDLDK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.3824 2 782.874178 1563.7338 NaN NaN NaN -0.80411 -0.00062952 NaN NaN NaN NaN 82.231 0.10896 82.231 82.198 82.307 -7.6294E-06 0 0 0 0.004753 2 49138 60.255 41.012 1 NaN NaN 0 2828900 0 2828900 24038 1486 9074 9284 37673;37674 37674 LTEEETVCLDLDK 13 1 0 Unmodified _LTEEETVCLDLDK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.8813 2 782.874178 1563.7338 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.374 1 81.374 80.874 81.874 0 0 0 0 0.0010991 1 49696 77.062 34.668 1 24039 1486 9074 9284 37675 37675 LTEGCSFR 8 0 1 Unmodified _LTEGCSFR_ 0 0 0 H0YMV8;Q71UM5;A4D1G5;C9J1C5;P42677 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.2305 2 485.226559 968.438566 81954.09 0.41144 0.00019964 0.2819 0.00013679 0.69335 0.00033643 485.226732850258 490.230754903936 28.201 0.61709 28.201 27.923 28.54 1.9073E-06 226 44 9 0 0 0 0.0028899 2 13148 98.523 72.414 1 0.83837 0.99375 0 529340000 294420000 234920000 24040 1298;1564 9075 9285 37676;37677 37677 LTEGCSFR 8 0 1 Unmodified _LTEGCSFR_ 0 0 0 H0YMV8;Q71UM5;A4D1G5;C9J1C5;P42677 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.2269 2 485.226559 968.438566 79396.35 -0.023912 -1.1603E-05 0.36878 0.00017894 0.34487 0.00016734 485.22673194466 490.230830811566 27.638 0.88506 27.638 27.401 28.286 0 197 46 9 0 0 0 0.0010092 2 12814 116.88 78.513 1 0.85889 1.005 0 646380000 364520000 281870000 24041 1298;1564 9075 9285 37678;37679 37679 LTEGCSFR 8 0 1 Unmodified _LTEGCSFR_ 0 0 0 H0YMV8;Q71UM5;A4D1G5;C9J1C5;P42677 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.2271 2 485.226559 968.438566 85144.67 0.28268 0.00013716 0.83282 0.00040411 1.1155 0.00054127 485.226857550052 490.231205989831 31.986 1.4638 31.986 31.357 32.821 3.8147E-06 319 75 10 0 0 0 0.0065453 1 13094 86.794 64.172 1 1.5634 1.3645 0 85312000 33151000 52162000 24042 1298;1564 9075 9285 37680 37680 LTEGQGSEIQPGDLDPLSR 19 0 1 Unmodified _LTEGQGSEIQPGDLDPLSR_ 0 0 0 B9EGR5;Q8IWI9;H3BP52;H3BTF4;H3BTN2 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1011.5061 2 1006.50018 2010.98581 61777.84 0.26713 0.00026886 0.64636 0.00065056 0.91349 0.00091943 1007.00195480265 1012.00573372638 108.28 0.49149 108.28 107.98 108.47 -7.6294E-06 80 23 6 0 0 0 0.015794 1 61231 23.956 23.956 1 1.8912 1.6872 0 2330400 833390 1497000 24043 1121 9076 9286 37681 37681 LTEIGPR 7 0 1 Unmodified _LTEIGPR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 398.2337 2 393.229428 784.444303 95642.08 0.43632 0.00017157 0.65483 0.0002575 1.0912 0.00042907 393.229459399576 398.23351492676 30.255 0.50614 30.255 30.002 30.508 0 181 43 6 0 0 0 0.026865 1 14743 74.439 25.678 1 1.0822 1.2607 0 189540000 92984000 96554000 24044 493 9077 9287 37682 37682 LTEIGPR 7 0 1 Unmodified _LTEIGPR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 398.2336 2 393.229428 784.444303 95419.48 0.92325 0.00036305 0.44911 0.0001766 1.3724 0.00053965 393.229385019935 398.233364147759 29.726 0.53613 29.726 29.491 30.027 -1.9073E-06 169 40 7 0 0 0 0.023524 1 14401 90.986 30.198 1 1.0557 1.2171 0 229320000 104530000 124790000 24045 493 9077 9287 37683 37683 LTEIGPR 7 0 1 Unmodified _LTEIGPR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 398.2337 2 393.229428 784.444303 96211.85 0.0043902 1.7264E-06 0.64422 0.00025333 0.64861 0.00025505 393.229503692893 398.233524392306 33.879 0.56641 33.879 33.501 34.068 0 159 46 6 0 0 0 0.05062 1 14441 54.787 15.968 1 1.2874 1.0991 0 20127000 8780500 11347000 24046 493 9077 9287 37684 37684 LTELLR 6 0 1 Unmodified _LTELLR_ 0 0 0 B7ZB32;Q9BR63;A8K666;Q9NSD9;A0A087WUY5;Q5QPE5;B7Z476;Q53FH8;Q6P5V6;Q9Y5X3 B7ZB32 B7ZB32 FARSB;SNX5 Phenylalanine--tRNA ligase beta subunit;Sorting nexin-5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 377.7381 2 372.734346 743.454139 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.058 1 51.058 50.558 51.558 -3.8147E-06 0 0 0 0.029058 1 28895 83.287 17.39 1 24047 757 9078 9288 37685 37685 LTELMFEHYNIPAFFLCK 18 1 0 Oxidation (M) _LTELM(ox)FEHYNIPAFFLCK_ LTELM(1)FEHYNIPAFFLCK LTELM(60.55)FEHYNIPAFFLCK 0 1 0 Q6FI97;Q53FS0;O96019;H7C5S0 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.7149 3 763.707604 2288.10098 74339.65 0.81653 0.00062359 0.55998 0.00042766 1.3765 0.0010513 764.042298593199 766.713581743676 123.42 0.56354 123.42 123.19 123.75 0 118 41 5 0 0 0 1.0587E-05 2 81961 60.549 57.496 1 1.1848 1.2018 0 5267500 2793400 2474100 24048 1434 9079 9289 37686;37687 37687 1129 LTELSGNPR 9 0 1 Unmodified _LTELSGNPR_ 0 0 0 R4GMS9;Q86U80;D6RJD3;B4DKI6;D6RID8;Q6P1K8;Q13888;B7ZW82 R4GMS9 R4GMS9 GTF2H2;GTF2H2C General transcription factor IIH subunit 2-like protein;General transcription factor IIH subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.7705 2 493.766906 985.519259 87168.29 0.15367 7.5876E-05 -0.045503 -2.2468E-05 0.10817 5.3408E-05 493.767337945774 498.770601194588 31.717 0.62095 31.717 31.503 32.124 0 101 33 5 0 0 0 0.011198 1 13041 58.596 33.673 1 1.2851 1.1528 0 2277200 934750 1342400 24049 989 9080 9290 37688 37688 LTEMETLQSQLMAEK 15 1 0 2 Oxidation (M) _LTEM(ox)ETLQSQLM(ox)AEK_ LTEM(1)ETLQSQLM(1)AEK LTEM(176.18)ETLQSQLM(176.18)AEK 0 2 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.4335 2 892.426252 1782.83795 64948.93 0.37919 0.0003384 0.093115 8.3098E-05 0.47231 0.0004215 892.426620891294 896.43400927368 65.341 0.81926 65.341 64.895 65.714 -7.6294E-06 262 73 6 0 0 0 3.7827E-47 1 37428 176.18 176.18 1 2.824 2.7666 0 21618000 3611100 18007000 24050 81 9081 9291 37689 37689 65;66 LTEMETLQSQLMAEK 15 1 0 2 Oxidation (M) _LTEM(ox)ETLQSQLM(ox)AEK_ LTEM(1)ETLQSQLM(1)AEK LTEM(159.99)ETLQSQLM(159.99)AEK 0 2 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.434 2 892.426252 1782.83795 65219.45 0.52092 0.00046489 -0.37674 -0.00033621 0.14419 0.00012868 892.425827664427 896.433525098021 66.11 0.82599 66.11 65.714 66.54 0 268 74 6 0 0 0 8.5752E-31 1 37994 159.99 159.99 1 3.2618 3.1963 0 21323000 4840500 16482000 24051 81 9081 9291 37690 37690 65;66 LTEMETLQSQLMAEK 15 1 0 2 Oxidation (M) _LTEM(ox)ETLQSQLM(ox)AEK_ LTEM(1)ETLQSQLM(1)AEK LTEM(43.54)ETLQSQLM(43.54)AEK 0 2 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.428 2 892.426252 1782.83795 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.03 1 65.03 64.53 65.53 0 0 0 0 0.016977 1 37422 43.544 37.303 1 24052 81 9081 9291 37691 37691 65;66 LTEMETLQSQLMAEK 15 1 0 2 Oxidation (M) _LTEM(ox)ETLQSQLM(ox)AEK_ LTEM(1)ETLQSQLM(1)AEK LTEM(145.09)ETLQSQLM(145.09)AEK 0 2 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.4346 2 892.426252 1782.83795 65268.64 0.4837 0.00043166 0.19556 0.00017452 0.67925 0.00060618 892.426612404395 896.434045493262 64.187 0.78679 64.187 63.774 64.561 0 292 73 6 0 0 0 5.1939E-22 1 37609 145.09 145.09 1 2.9511 3.198 0 22139000 5240200 16899000 24053 81 9081 9291 37692 37692 65;66 LTEMETLQSQLMAEK 15 1 0 2 Oxidation (M) _LTEM(ox)ETLQSQLM(ox)AEK_ LTEM(1)ETLQSQLM(1)AEK LTEM(153.54)ETLQSQLM(153.54)AEK 0 2 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.9366 2 892.426252 1782.83795 64708.55 0.38001 0.00033913 -0.41475 -0.00037014 -0.03474 -3.1003E-05 892.425967548763 896.433581330382 65.119 0.85989 65.119 64.701 65.561 7.6294E-06 218 70 7 0 0 0 2.5826E-30 1 38191 153.54 153.54 1 2.7767 2.8744 0 18650000 4779900 13870000 24054 81 9081 9291 37693 37693 65;66 LTEMETLQSQLMAEK 15 1 0 2 Oxidation (M) _LTEM(ox)ETLQSQLM(ox)AEK_ LTEM(1)ETLQSQLM(1)AEK LTEM(40.48)ETLQSQLM(40.48)AEK 0 2 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.9284 2 892.426252 1782.83795 NaN NaN NaN -0.06971 -6.2211E-05 NaN NaN NaN NaN 64.925 0.33095 64.925 64.778 65.108 0 0 0 0 0.005797 1 38203 40.475 30.788 1 NaN NaN 0 5132400 5132400 0 24055 81 9081 9291 37694 37694 65;66 LTEQLAGPLR 10 0 1 Unmodified _LTEQLAGPLR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.3207 2 549.319306 1096.62406 78763.17 0.34562 0.00018986 -0.21772 -0.0001196 0.1279 7.0259E-05 549.319516499055 554.323337131291 64.928 0.75993 64.928 64.6 65.36 0 274 67 6 0 0 0 1.1374E-05 2 37266 104.2 90.479 1 0.91912 0.93207 0 28682000 13170000 15512000 24056 1563 9082 9292 37695;37696 37695 LTEQLAGPLR 10 0 1 Unmodified _LTEQLAGPLR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.3195 2 549.319306 1096.62406 81146.45 0.42662 0.00023435 0.34729 0.00019077 0.77391 0.00042512 549.319690150364 554.32326868804 63.831 0.64147 63.831 63.423 64.065 -3.8147E-06 250 57 6 0 0 0 1.2219E-05 2 37508 103.56 95.031 1 0.84842 0.92836 0 30760000 15105000 15655000 24057 1563 9082 9292 37697;37698 37698 LTEQLAGPLR 10 0 1 Unmodified _LTEQLAGPLR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.3198 2 549.319306 1096.62406 80809.4 0.5414 0.0002974 0.051266 2.8161E-05 0.59267 0.00032556 549.31957919481 554.323392508657 74.562 1.008 74.562 73.93 74.938 0 256 68 6 0 0 0 0.00095588 2 39492 78.516 73.314 1 1.0341 0.88273 0 5685200 2911600 2773700 24058 1563 9082 9292 37699;37700 37700 LTEQLAGPLR 10 0 1 Unmodified _LTEQLAGPLR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.3199 2 549.319306 1096.62406 80755.23 0.43291 0.00023781 0.20952 0.00011509 0.64244 0.0003529 549.319588312963 554.323326371039 74.858 0.77402 74.858 74.444 75.218 -7.6294E-06 185 46 6 0 0 0 0.00030431 2 38862 90.657 78.702 1 1.0378 0.86301 0 5036000 2398500 2637500 24059 1563 9082 9292 37701;37702 37702 LTETHLPAQAR 11 0 1 Unmodified _LTETHLPAQAR_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.8392 2 618.838394 1235.66223 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.636 1 27.636 27.136 28.136 0 0 0 0 0.030447 1 12811 48.794 27.331 1 24060 641 9083 9293 37703 37703 LTETHLPAQAR 11 0 1 Unmodified _LTETHLPAQAR_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2309 3 412.894688 1235.66223 94621.56 0.59872 0.00024721 -0.16852 -6.958E-05 0.4302 0.00017763 412.894698468178 416.230553532229 26.948 0.42255 26.948 26.745 27.167 0 73 19 6 0 0 0 0.010752 1 12266 25.016 20.676 1 0.78074 0.82836 0 23945000 13593000 10352000 24061 641 9083 9293 37704 37704 LTETHLPAQAR 11 0 1 Unmodified _LTETHLPAQAR_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.8386 2 618.838394 1235.66223 NaN NaN NaN -0.12958 -8.0188E-05 NaN NaN NaN NaN 26.954 0.25567 26.954 26.804 27.059 0 0 0 0 0.006292 1 12347 63.816 49.041 1 NaN NaN 0 6901000 6901000 0 24062 641 9083 9293 37705 37705 LTEVKDELEPLLELVEQGIIPPGK 24 2 0 Unmodified _LTEVKDELEPLLELVEQGIIPPGK_ 0 0 1 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.4578 3 887.164993 2658.47315 64420.79 0.46928 0.00041633 1.1217 0.00099516 1.591 0.0014115 887.500001592193 892.509233329596 133.57 0.2149 133.57 133.43 133.64 0 19 4 9 0 0 0 1.8565E-16 1 87550 80.102 80.102 1 1.0196 1.2037 0 51229000 23160000 28069000 24063 2063 9084 9294 37706 37706 LTEVQDDKEEEEEENPLLVPLEEK 24 2 0 Unmodified _LTEVQDDKEEEEEENPLLVPLEEK_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 952.4648 3 952.129113 2853.36551 62083.36 0.99231 0.00094481 -0.1696 -0.00016148 0.8227 0.00078332 952.463260026181 957.806031408821 102.05 1.0295 102.05 101.51 102.54 -7.6294E-06 728 82 12 0 0 0 6.5199E-06 2 62496 43.888 43.888 1 0.88883 1.0488 0 150420000 78025000 72395000 24064 1898 9085 9295 37707;37708 37707 LTEVQDDKEEEEEENPLLVPLEEK 24 2 0 Unmodified _LTEVQDDKEEEEEENPLLVPLEEK_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 952.7979 3 952.129113 2853.36551 61802.84 0.57074 0.00054341 0.017 1.6186E-05 0.58774 0.0005596 952.463410242168 957.806248435008 101.19 0.97181 101.19 100.81 101.79 -7.6294E-06 677 75 12 0 0 0 1.0228E-05 2 63480 40.668 40.668 1 0.8606 1.0016 0 183390000 92673000 90713000 24065 1898 9085 9295 37709;37710 37710 LTEVQDDKEEEEEENPLLVPLEEK 24 2 0 Unmodified _LTEVQDDKEEEEEENPLLVPLEEK_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 952.4642 3 952.129113 2853.36551 61829.36 0.87212 0.00083037 -0.040038 -3.8121E-05 0.83208 0.00079225 952.463281830162 957.806153015418 113.86 1.3207 113.86 113.46 114.78 7.6294E-06 510 58 13 0 0 0 1.3001E-16 3 66269 98.135 95.911 1 1.124 0.95166 0 77825000 35949000 41876000 24066 1898 9085 9295 37711;37712;37713 37712 LTEVQDDKEEEEEENPLLVPLEEK 24 2 0 Unmodified _LTEVQDDKEEEEEENPLLVPLEEK_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 952.4642 3 952.129113 2853.36551 62065.13 0.46784 0.00044545 0.037361 3.5572E-05 0.5052 0.00048102 952.463389278176 957.806275966071 114 2.2305 114 113.5 115.73 -7.6294E-06 748 102 12 0 0 0 1.491E-06 5 65389 48.255 48.255 1 1.1702 0.99378 0 25876000 11373000 14502000 24067 1898 9085 9295 37714;37715;37716;37717;37718 37714 LTEVSISSDAFFPFR 15 0 1 Unmodified _LTEVSISSDAFFPFR_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06;H7C1S2 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.4407 2 858.435595 1714.85664 66978.41 0.97443 0.00083649 0.13645 0.00011713 1.1109 0.00095362 858.937125404983 863.439544021307 123.95 0.38583 123.95 123.76 124.15 0 129 26 7 0 0 0 7.6454E-06 1 80460 94.767 85.352 1 2.6282 2.65 0 7777800 1763100 6014700 24068 852 9086 9296 37719 37719 LTFDSSFSPNTGK 13 1 0 Unmodified _LTFDSSFSPNTGK_ 0 0 0 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.8461 2 700.838256 1399.66196 71890.78 0.53874 0.00037757 0.10599 7.4279E-05 0.64472 0.00045185 700.838370362326 704.845295328163 76.749 1.177 76.749 76.345 77.522 0 582 100 10 0 0 0 2.3253E-13 2 45096 128.01 116.86 1 1.7245 2.0332 0 336850000 123040000 213810000 24069 639 9087 9297 37720;37721 37720 LTFDSSFSPNTGK 13 1 0 Unmodified _LTFDSSFSPNTGK_ 0 0 0 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.8463 2 700.838256 1399.66196 72305.27 0.61182 0.00042878 -0.0859 -6.0202E-05 0.52592 0.00036858 700.838168873281 704.845220606655 75.767 1.0467 75.767 75.425 76.471 0 612 94 10 0 0 0 1.9332E-05 2 45512 99.283 90.75 1 1.6936 1.9928 0 379540000 132850000 246690000 24070 639 9087 9297 37722;37723 37722 LTFDSSFSPNTGK 13 1 0 Unmodified _LTFDSSFSPNTGK_ 0 0 0 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.8452 2 700.838256 1399.66196 72511.55 0.56053 0.00039284 0.013505 9.4651E-06 0.57403 0.0004023 700.838217351886 704.845275298908 87.579 1.1505 87.579 87.186 88.337 0 380 70 9 0 0 0 0.00010772 3 48031 91.937 77.264 1 2.1378 1.7318 0 24272000 7966800 16305000 24071 639 9087 9297 37724;37725;37726 37725 LTFDSSFSPNTGK 13 1 0 Unmodified _LTFDSSFSPNTGK_ 0 0 0 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.8466 2 700.838256 1399.66196 72564.8 0.52104 0.00036517 0.113 7.9192E-05 0.63404 0.00044436 700.838247671586 704.845352346739 87.715 1.3556 87.715 87.322 88.678 0 381 77 9 0 0 0 3.7969E-05 2 47300 97.734 86.583 1 2.1307 1.7484 0 27523000 8569900 18953000 24072 639 9087 9297 37727;37728 37727 LTFDSSFSPNTGKK 14 2 0 Unmodified _LTFDSSFSPNTGKK_ 0 0 1 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.9017 2 764.885738 1527.75692 72073.46 0.61573 0.00047096 1.1744 0.0008983 1.7902 0.0013693 764.885853216056 772.901152616584 58.87 0.36113 58.87 58.698 59.059 0 93 29 4 0 0 0 0.00033929 1 33423 77.062 68.108 1 1.3969 1.6628 0 22634000 6077800 16556000 24073 639 9088 9298 37729 37729 LTFDSSFSPNTGKK 14 2 0 Unmodified _LTFDSSFSPNTGKK_ 0 0 1 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.6026 3 510.259584 1527.75692 84307.67 0.36753 0.00018754 -0.09139 -4.6632E-05 0.27615 0.00014091 510.259607764659 515.602163327598 68.508 0.58807 68.508 68.182 68.77 0 223 43 8 0 0 0 0.051864 1 35794 14.764 14.764 1 2.1992 1.8781 0 14748000 4846800 9901100 24074 639 9088 9298 37730 37730 LTFDTTFSPNTGK 13 1 0 Unmodified _LTFDTTFSPNTGK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.8587 2 714.853906 1427.69326 NaN NaN NaN -0.13474 -9.6316E-05 NaN NaN NaN NaN 96.124 1.1008 96.124 95.763 96.863 0 0 0 0 0.0047052 1 52953 60.434 45.283 1 NaN NaN 0 20043000 0 20043000 24075 28 9089 9299 37731 37731 LTFDTTFSPNTGKK 14 2 0 Unmodified _LTFDTTFSPNTGKK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.9461 3 519.603351 1555.78822 NaN NaN NaN -0.50792 -0.00026392 NaN NaN NaN NaN 67.948 0.72915 67.948 67.681 68.41 0 0 0 0 0.00083796 1 39345 63.128 46.599 1 NaN NaN 0 35752000 0 35752000 24076 28 9090 9300 37732 37732 LTFDTTFSPNTGKK 14 2 0 Unmodified _LTFDTTFSPNTGKK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.2645 3 519.603351 1555.78822 82709.67 0.47323 0.00024589 -0.28197 -0.00014651 0.19126 9.9381E-05 519.603327567527 524.94598395687 66.551 0.53168 66.551 66.285 66.817 0 240 43 8 0 0 0 0.027379 1 39428 20.049 20.049 1 2.3811 2.7586 0 58904000 16572000 42332000 24077 28 9090 9300 37733 37733 LTFDTTFSPNTGKK 14 2 0 Unmodified _LTFDTTFSPNTGKK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.9467 3 519.603351 1555.78822 83221.4 0.15383 7.993E-05 -0.17619 -9.1548E-05 -0.02236 -1.1619E-05 519.603388221316 524.946134763465 77.722 0.9024 77.722 77.452 78.355 0 239 59 8 0 0 0 0.060437 1 41600 12.492 12.492 1 3.3573 2.8695 0 12541000 2746300 9795200 24078 28 9090 9300 37734 37734 LTFIPGFIGSLK 12 1 0 Unmodified _LTFIPGFIGSLK_ 0 0 0 B4DIP2;V9HW13;Q1RMC9;Q96RT1 B4DIP2 B4DIP2 ERBB2IP;HEL-S-78 Protein LAP2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.8917 2 646.884281 1291.75401 NaN NaN NaN -0.31084 -0.00020108 NaN NaN NaN NaN 125.31 0.43474 125.31 125.05 125.49 0 0 0 0 0.0018878 1 81411 72.928 46.544 1 NaN NaN 0 1891500 0 1891500 24079 981 9091 9301 37735 37735 LTFIPGFIGSLK 12 1 0 Unmodified _LTFIPGFIGSLK_ 0 0 0 B4DIP2;V9HW13;Q1RMC9;Q96RT1 B4DIP2 B4DIP2 ERBB2IP;HEL-S-78 Protein LAP2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3934 2 646.884281 1291.75401 NaN NaN NaN -0.051909 -3.3579E-05 NaN NaN NaN NaN 124.85 0.3651 124.85 124.65 125.02 7.6294E-06 0 0 0 0.0035301 1 83044 65.627 59.036 1 NaN NaN 0 1707500 0 1707500 24080 981 9091 9301 37736 37736 LTFSCLGGSDNFK 13 1 0 Unmodified _LTFSCLGGSDNFK_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.3465 2 723.340109 1444.66566 71312.29 0.66015 0.00047751 -0.19124 -0.00013833 0.46891 0.00033918 723.339855916366 727.347096630909 87.323 1.122 87.323 86.777 87.899 0 373 100 6 0 0 0 0.00013105 1 52380 79.693 71.468 1 5.7295 6.2324 0 48207000 8967300 39240000 24081 323 9092 9302 37737 37737 LTFSCLGGSDNFK 13 1 0 Unmodified _LTFSCLGGSDNFK_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.3475 2 723.340109 1444.66566 72534.38 0.48573 0.00035135 0.15921 0.00011516 0.64493 0.00046651 723.339981426875 727.347316694683 86.598 0.9785 86.598 85.988 86.966 0 340 86 7 0 0 0 0.011486 1 53217 40.496 30.265 1 5.1562 5.8123 0 60961000 12767000 48195000 24082 323 9092 9302 37738 37738 LTFSCLGGSDNFK 13 1 0 Unmodified _LTFSCLGGSDNFK_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.3469 2 723.340109 1444.66566 71519 0.56091 0.00040573 -0.16822 -0.00012168 0.39269 0.00028405 723.33977258957 727.347185238806 100.09 0.87206 100.09 99.8 100.67 0 255 71 5 0 0 0 0.00015233 1 56626 72.817 64.582 1 3.3032 2.6331 0 9651500 2975900 6675600 24083 323 9092 9302 37739 37739 LTFSCLGGSDNFK 13 1 0 Unmodified _LTFSCLGGSDNFK_ 0 0 0 A0A024RB32;A0A087WYT3;B3KUY2;Q15185 A0A024RB32 A0A024RB32 PTGES3 Prostaglandin E synthase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.3481 2 723.340109 1444.66566 72045.45 0.55218 0.00039941 -0.029896 -2.1625E-05 0.52228 0.00037779 723.339746749447 727.347271716833 100.11 0.87296 100.11 99.652 100.52 0 294 74 5 0 0 0 0.021206 1 55689 35.496 31.478 1 3.5009 2.8647 0 8432500 2347900 6084600 24084 323 9092 9302 37740 37740 LTGDVLQPPGTSVPIVK 17 1 0 Unmodified _LTGDVLQPPGTSVPIVK_ 0 0 0 Q9UQR0;B4DZR9 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 860.9966 2 860.99582 1719.97709 68124.22 0.91174 0.000785 0.17048 0.00014678 1.0822 0.00093178 860.995665266578 865.504487768527 103.52 0.50943 103.52 103.25 103.76 0 185 40 6 0 0 0 1.9557E-09 2 63833 109.24 109.24 1 0.59976 0.61421 0 17672000 9759500 7912800 24085 2118 9093 9303 37741;37742 37742 LTGDVLQPPGTSVPIVK 17 1 0 Unmodified _LTGDVLQPPGTSVPIVK_ 0 0 0 Q9UQR0;B4DZR9 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.9962 2 860.99582 1719.97709 68066.28 0.8934 0.00076921 0.34419 0.00029634 1.2376 0.0010656 861.498064217767 865.003243106198 102.81 0.58722 102.81 102.55 103.14 0 205 47 6 0 0 0 3.2337E-07 2 65056 97.163 97.163 1 0.64327 0.66017 0 17748000 10360000 7388000 24086 2118 9093 9303 37743;37744 37744 LTGDVLQPPGTSVPIVK 17 1 0 Unmodified _LTGDVLQPPGTSVPIVK_ 0 0 0 Q9UQR0;B4DZR9 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.9958 2 860.99582 1719.97709 66205.31 0.91008 0.00078358 0.087455 7.5298E-05 0.99754 0.00085888 861.498044824799 865.504262155063 115.38 0.5041 115.38 115.1 115.6 0 130 23 7 0 0 0 0.014886 1 67513 28.624 28.505 1 1.1005 0.86809 0 5930500 2902900 3027600 24087 2118 9093 9303 37745 37745 LTGDVLQPPGTSVPIVK 17 1 0 Unmodified _LTGDVLQPPGTSVPIVK_ 0 0 0 Q9UQR0;B4DZR9 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 865.0037 2 860.99582 1719.97709 67267.17 0.58247 0.0005015 0.38624 0.00033255 0.96871 0.00083405 860.99588079267 865.003192482706 115.2 0.50035 115.2 114.93 115.43 0 142 24 8 0 0 0 0.015537 1 66461 28.206 28.037 1 1.1966 0.97655 0 6320600 3013200 3307300 24088 2118 9093 9303 37746 37746 LTGEDVFGITVPLITSTTGAK 21 1 0 Unmodified _LTGEDVFGITVPLITSTTGAK_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1064.5865 2 1060.5779 2119.14125 60273.53 0.93378 0.00099034 -1.0411 -0.0011042 -0.10737 -0.00011387 1061.07838169379 1064.58461456507 132.22 0.51532 132.22 131.93 132.44 0 191 34 10 0 0 0 8.723E-05 2 86222 39.509 39.509 1 1.8059 1.8901 0 12048000 4061100 7987300 24089 1293 9094 9304 37747;37748 37747 LTGEDVFGITVPLITSTTGAK 21 1 0 Unmodified _LTGEDVFGITVPLITSTTGAK_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1065.0881 2 1060.5779 2119.14125 60526.24 0.75827 0.00080421 -0.1137 -0.00012058 0.64458 0.00068362 1060.57775166105 1064.58526693672 131.8 0.46756 131.8 131.55 132.02 1.5259E-05 166 33 7 0 0 0 0.0040746 1 88096 28.812 28.812 1 2.0068 2.009 0 13959000 4743200 9216000 24090 1293 9094 9304 37749 37749 LTGEVVALK 9 1 0 Unmodified _LTGEVVALK_ 0 0 0 A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9;G3V317 A0A024RB10 A0A024RB10 CDK2 Cyclin-dependent kinase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.294 2 465.286943 928.559333 NaN NaN NaN -0.31322 -0.00014574 NaN NaN NaN NaN 58.097 0.43869 58.097 57.861 58.3 0 0 0 0 0.046103 1 33762 48.283 22.546 1 NaN NaN 0 10733000 0 10733000 24091 318 9095 9305 37750 37750 LTGFPYK 7 1 0 Unmodified _LTGFPYK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.2297 2 413.228897 824.44324 94942.52 0.09542 3.943E-05 0.86422 0.00035712 0.95964 0.00039655 413.229152000806 417.236152427619 56.621 0.92578 56.621 56.35 57.276 0 309 78 7 0 0 0 0.034211 1 31782 62.714 45.153 1 0.90096 0.97748 0 45400000 22943000 22457000 24092 1742 9096 9306 37751 37751 LTGFPYK 7 1 0 Unmodified _LTGFPYK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.2297 2 413.228897 824.44324 95019.05 0.087348 3.6095E-05 0.87457 0.0003614 0.96192 0.00039749 413.229136384098 417.236107431261 55.468 0.97597 55.468 55.193 56.169 3.8147E-06 288 74 7 0 0 0 0.034211 1 31679 62.714 45.788 1 0.96062 1.0826 0 60305000 30850000 29455000 24093 1742 9096 9306 37752 37752 LTGGSFTMK 9 1 0 Oxidation (M) _LTGGSFTM(ox)K_ LTGGSFTM(1)K LTGGSFTM(76.83)K 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.2462 2 479.239135 956.463718 85559.56 -0.063171 -3.0274E-05 0.50275 0.00024094 0.43957 0.00021066 479.239046866928 483.246900132559 26.708 0.66102 26.708 26.387 27.048 0 107 40 5 0 0 0 0.0010161 2 12010 76.827 76.827 1 1.0924 1.1748 0 40172000 19932000 20240000 24094 1942 9097 9307 37753;37754 37753 1780 LTGGSFTMK 9 1 0 Oxidation (M) _LTGGSFTM(ox)K_ LTGGSFTM(1)K LTGGSFTM(66.69)K 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.2464 2 479.239135 956.463718 87895.8 0.22815 0.00010934 -0.90834 -0.00043531 -0.68018 -0.00032597 479.239109193196 483.246226611272 26.522 0.3343 26.522 26.389 26.723 0 86 17 7 0 0 0 0.002641 2 11881 66.692 66.692 1 1.0419 1.1739 0 59611000 25314000 34297000 24095 1942 9097 9307 37755;37756 37755 1780 LTGMAFR 7 0 1 Oxidation (M) _LTGM(ox)AFR_ LTGM(1)AFR LTGM(52.68)AFR 0 1 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;Q5ZEY3;A0A0K0K1K1;O14556 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH;GAPD;GAPDHS Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.2139 2 406.210181 810.405809 NaN NaN NaN 0.24584 9.9861E-05 NaN NaN NaN NaN 27.498 0.28332 27.498 27.295 27.579 -1.9073E-06 0 0 0 0.019881 1 12657 52.683 34.796 1 NaN NaN 0 40922000 0 40922000 24096 1442 9098 9308 37757 37757 1144 LTGMAFR 7 0 1 Oxidation (M) _LTGM(ox)AFR_ LTGM(1)AFR LTGM(52.68)AFR 0 1 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;Q5ZEY3;A0A0K0K1K1;O14556 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH;GAPD;GAPDHS Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.2143 2 406.210181 810.405809 NaN NaN NaN 0.1285 5.2199E-05 NaN NaN NaN NaN 27.026 0.38031 27.026 26.905 27.285 0 0 0 0 0.019881 1 12393 52.683 34.916 1 NaN NaN 0 63624000 0 63624000 24097 1442 9098 9308 37758 37758 1144 LTGMERDLVAIEAKLSDLQK 20 2 1 Unmodified _LTGMERDLVAIEAKLSDLQK_ 0 0 2 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.4099 3 744.075233 2229.20387 NaN NaN NaN -0.27853 -0.00020724 NaN NaN NaN NaN 123.28 0.46415 123.28 123.16 123.62 -7.6294E-06 0 0 0 0.043436 1 72731 16.487 7.6642 1 NaN NaN 0 4819200 4819200 0 24098 415 9099 9309 37759 37759 LTGSYNTMVGNNEGSMVLGLK 21 1 0 2 Oxidation (M) _LTGSYNTM(ox)VGNNEGSM(ox)VLGLK_ LTGSYNTM(1)VGNNEGSM(1)VLGLK LTGSYNTM(48.11)VGNNEGSM(48.11)VLGLK 0 2 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1113.5394 2 1109.02994 2216.04532 NaN NaN NaN 0.018252 2.0242E-05 NaN NaN NaN NaN 81.691 0.5958 81.691 81.349 81.945 0 0 0 0 7.4885E-05 1 49751 48.112 40.387 1 NaN NaN 0 10849000 0 10849000 24099 2147 9100 9310 37760 37760 1985;1986 LTGVFAPR 8 0 1 Unmodified _LTGVFAPR_ 0 0 0 B2R491;P62701;Q96IR1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7527 2 430.75307 859.491587 91546.81 0.13429 5.7846E-05 0.14112 6.0786E-05 0.27541 0.00011863 430.752886849453 435.757156189508 56.032 1.9155 56.032 55.259 57.175 0 659 162 7 0 0 0 0.0033502 3 31580 97.068 65.778 1 0.96607 1.1431 0 328720000 166170000 162550000 24100 824 9101 9311 37761;37762;37763 37762 LTGVFAPR 8 0 1 Unmodified _LTGVFAPR_ 0 0 0 B2R491;P62701;Q96IR1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7527 2 430.75307 859.491587 NaN NaN NaN -0.47199 -0.00020331 NaN NaN NaN NaN 55.327 0.18552 55.327 55.193 55.378 0 0 0 0 0.03914 1 31108 54.205 19.099 1 NaN NaN 0 17653000 17653000 0 24101 824 9101 9311 37764 37764 LTGVFAPR 8 0 1 Unmodified _LTGVFAPR_ 0 0 0 B2R491;P62701;Q96IR1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7529 2 430.75307 859.491587 91418.78 0.039151 1.6864E-05 0.15291 6.5867E-05 0.19206 8.2732E-05 430.752931740377 435.757165444272 54.781 1.7048 54.781 53.901 55.606 3.8147E-06 633 140 6 0 0 0 0.0018287 2 31346 105.39 54.425 1 1.0219 1.1814 0 261370000 124880000 136500000 24102 824 9101 9311 37765;37766 37766 LTGVFAPR 8 0 1 Unmodified _LTGVFAPR_ 0 0 0 B2R491;P62701;Q96IR1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 435.757 2 430.75307 859.491587 92173.73 -0.43264 -0.00018636 0.23161 9.9766E-05 -0.20103 -8.6595E-05 430.752963614303 435.757269977687 63.678 1.9079 63.678 63.07 64.978 3.8147E-06 760 155 8 0 0 0 0.033206 2 32683 50.127 33.2 1 0.91786 0.78974 0 51273000 25381000 25892000 24103 824 9101 9311 37767;37768 37767 LTGVFAPR 8 0 1 Unmodified _LTGVFAPR_ 0 0 0 B2R491;P62701;Q96IR1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 430.753 2 430.75307 859.491587 92311.2 -0.4508 -0.00019418 0.25536 0.00011 -0.19544 -8.4185E-05 430.752983942523 435.757319210445 64.11 2.0797 64.11 63.387 65.467 0 761 173 8 0 0 0 0.030669 1 32456 51.787 34.02 1 0.89792 0.78327 0 43437000 22059000 21378000 24104 824 9101 9311 37769 37769 LTIAEER 7 0 1 Unmodified _LTIAEER_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47 B2R491 B2R491 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2319 2 416.232168 830.449782 91580.68 0.40068 0.00016678 -0.094407 -3.9295E-05 0.30627 0.00012748 416.232327878561 421.236726776314 32.106 1.2374 32.106 31.393 32.631 0 548 115 7 0 0 0 0.016891 2 15773 97.602 14.557 1 0.91288 1.0796 0 280030000 141940000 138090000 24105 824 9102 9312 37770;37771 37771 LTIAEER 7 0 1 Unmodified _LTIAEER_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47 B2R491 B2R491 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2322 2 416.232168 830.449782 91561.41 0.36818 0.00015325 0.58959 0.00024541 0.95777 0.00039865 416.23228643901 421.236578047331 31.504 0.89734 31.504 30.915 31.813 0 370 79 8 0 0 0 0.0034854 2 15538 134.44 23.159 1 1.0986 1.2825 0 534260000 266910000 267360000 24106 824 9102 9312 37772;37773 37773 LTIAEER 7 0 1 Unmodified _LTIAEER_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47 B2R491 B2R491 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 421.2362 2 416.232168 830.449782 92225 -0.48678 -0.00020261 0.37646 0.0001567 -0.11031 -4.5916E-05 416.232224830287 421.236633922645 36.091 1.041 36.091 35.668 36.709 0 359 88 9 0 0 0 0.027012 2 16223 85.265 10.85 1 0.8825 0.76227 0 95881000 49479000 46403000 24107 824 9102 9312 37774;37775 37775 LTIAEER 7 0 1 Unmodified _LTIAEER_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47 B2R491 B2R491 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 421.2361 2 416.232168 830.449782 90302.88 -0.31132 -0.00012958 -0.79144 -0.00032942 -1.1028 -0.000459 416.232065462323 421.236343649299 35.934 1.109 35.934 35.526 36.635 0 475 97 8 0 0 0 0.029647 1 15611 69.998 7.2812 1 0.81599 0.71204 0 64472000 33564000 30908000 24108 824 9102 9312 37776 37776 LTIAEERDK 9 1 1 Unmodified _LTIAEERDK_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47 B2R491 B2R491 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 358.8643 3 358.864506 1073.57169 99228.63 0.086031 3.0874E-05 -0.086269 -3.0959E-05 -0.00023736 -8.5181E-08 358.864355988645 364.8719686513 22.553 0.33355 22.553 22.388 22.722 0 44 13 5 0 0 0 0.0070208 1 8553 54.982 32.896 1 1.0025 1.1354 0 16490000 8971800 7518000 24109 824 9103 9313 37777 37777 LTIAFQAK 8 1 0 Unmodified _LTIAFQAK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.2752 2 446.268553 890.522553 93471.24 0.084528 3.7722E-05 0.12196 5.4426E-05 0.20649 9.2148E-05 446.268433101698 450.275569603889 68.838 0.82595 68.838 68.513 69.339 0 251 71 5 0 0 0 0.0078194 3 40916 81.297 72.474 1 2.8045 3.1047 0 45732000 11222000 34510000 24110 42 9104 9314 37778;37779;37780 37779 LTIAFQAK 8 1 0 Unmodified _LTIAFQAK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 450.2756 2 446.268553 890.522553 93970.14 0.0097992 4.3731E-06 -0.13739 -6.1311E-05 -0.12759 -5.6938E-05 446.268319284313 450.275596823372 80.245 0.58965 80.245 79.931 80.521 0 107 33 4 0 0 0 0.063595 1 42441 38.792 35.18 1 2.5665 2.1545 0 1501200 441100 1060100 24111 42 9104 9314 37781 37781 LTIGSNLSIR 10 0 1 Unmodified _LTIGSNLSIR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.3195 2 537.319306 1072.62406 82657.95 0.5185 0.0002786 0.11667 6.2691E-05 0.63518 0.00034129 537.319330029118 542.323402083102 81.614 1.0776 81.614 81.294 82.372 0 385 94 8 0 0 0 0.00017611 2 48577 94.85 77.61 1 0.33276 0.39362 0 299430000 223380000 76054000 24112 1476 9105 9315 37782;37783 37782 LTIGSNLSIR 10 0 1 Unmodified _LTIGSNLSIR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.3195 2 537.319306 1072.62406 82223.1 0.49243 0.00026459 0.17997 9.67E-05 0.6724 0.00036129 537.31937050988 542.323388272111 80.681 1.0377 80.681 80.235 81.272 0 413 86 9 0 0 0 0.00016057 2 49006 95.358 60.002 1 0.32004 0.37298 0 465770000 355300000 110460000 24113 1476 9105 9315 37784;37785 37784 LTIGSNLSIR 10 0 1 Unmodified _LTIGSNLSIR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.3198 2 537.319306 1072.62406 80936.42 0.59112 0.00031762 0.49789 0.00026753 1.089 0.00058514 537.319253748896 542.323252008009 93.623 1.2319 93.623 93.238 94.47 0 389 80 9 0 0 0 0.0012794 2 52262 74.376 47.246 1 0.29902 0.25493 0 36657000 27641000 9015700 24114 1476 9105 9315 37786;37787 37786 LTIGSNLSIR 10 0 1 Unmodified _LTIGSNLSIR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.3202 2 537.319306 1072.62406 81799.38 0.52132 0.00028012 -0.039136 -2.1028E-05 0.48219 0.00025909 537.319216540071 542.32321002117 93.486 1.0976 93.486 93.126 94.223 0 307 73 7 0 0 0 0.00060252 2 51384 84.213 66.973 1 0.30651 0.26752 0 82605000 62118000 20487000 24115 1476 9105 9315 37788;37789 37788 LTIPILYVK 9 1 0 Unmodified _LTIPILYVK_ 0 0 0 Q68D16;A8MT37;A0A024R0L5;P49840;M0QYV0 Q68D16 Q68D16 DKFZp686D0638;GSK3A Glycogen synthase kinase-3 alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.351 2 530.344261 1058.67397 NaN NaN NaN -0.80373 -0.00042625 NaN NaN NaN NaN 116.89 0.34905 116.89 116.72 117.07 0 0 0 0 0.047451 1 74764 47.849 18.275 1 NaN NaN 0 1696900 0 1696900 24116 51 9106 9316 37790 37790 LTIQANLNR 9 0 1 Unmodified _LTIQANLNR_ 0 0 0 Q9UKN8;Q05CN7 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.804 2 521.803823 1041.59309 84305.26 0.25863 0.00013495 0.41216 0.00021507 0.67079 0.00035002 521.803970640701 526.808134362329 55.201 0.98254 55.201 54.741 55.724 0 195 75 5 0 0 0 0.0003362 1 31622 101.64 84.403 1 0.92437 1.0137 0 40133000 22540000 17593000 24117 2107 9107 9317 37791 37791 LTISSPLEAHK 11 1 0 Unmodified _LTISSPLEAHK_ 0 0 0 A8K6V3;Q15393 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 401.8987 3 399.227556 1194.66084 96117.6 0.070218 2.8033E-05 0.37231 0.00014864 0.44253 0.00017667 399.227673077952 401.89904028908 58.038 0.66965 58.038 57.718 58.388 0 212 53 6 0 0 0 0.0078955 2 32889 37.613 29.184 1 1.3526 1.3502 0 26457000 11893000 14564000 24118 764 9108 9318 37792;37793 37793 LTISSPLEAHK 11 1 0 Unmodified _LTISSPLEAHK_ 0 0 0 A8K6V3;Q15393 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 399.5618 3 399.227556 1194.66084 96429.57 0.29886 0.00011931 -0.19447 -7.7638E-05 0.10439 4.1677E-05 399.227479633537 401.898856948991 56.759 0.66967 56.759 56.485 57.155 0 206 49 6 0 0 0 0.032306 1 32845 27.137 14.924 1 1.2547 1.326 0 20112000 7665400 12447000 24119 764 9108 9318 37794 37794 LTITSNPEMTFPGER 15 0 1 Oxidation (M) _LTITSNPEM(ox)TFPGER_ LTITSNPEM(1)TFPGER LTITSNPEM(45.92)TFPGER 0 1 0 Q9H3U1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 859.9196 2 854.914169 1707.81379 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.955 1 79.955 79.455 80.455 0 0 0 0 0.0054514 1 47484 45.915 31.758 1 24120 2029 9109 9319 37795 37795 1869 LTITSNPEMTFPGER 15 0 1 Oxidation (M) _LTITSNPEM(ox)TFPGER_ LTITSNPEM(1)TFPGER LTITSNPEM(53.97)TFPGER 0 1 0 Q9H3U1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 859.9212 2 854.914169 1707.81379 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.006 1 79.006 78.506 79.506 0 0 0 0 0.0020066 1 47961 53.967 39.732 1 24121 2029 9109 9319 37796 37796 1869 LTLADLR 7 0 1 Unmodified _LTLADLR_ 0 0 0 A0A024R0F1;Q9UNY4;X6RI15 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.2457 2 401.245078 800.475603 NaN NaN NaN 0.46668 0.00018725 NaN NaN NaN NaN 74.542 0.53679 74.542 74.111 74.648 0 0 0 0 0.052116 1 44757 57.281 6.3151 1 NaN NaN 0 5657700 5657700 0 24122 44 9110 9320 37797 37797 LTLDTIFVPNTGK 13 1 0 Unmodified _LTLDTIFVPNTGK_ 0 0 0 Q9Y277;E5RJN6;E5RHZ6;E5RK27;E5RFP6 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.4001 2 709.898117 1417.78168 72873.23 0.84918 0.00060283 0.22077 0.00015672 1.07 0.00075956 709.898445147892 713.905288581614 111.19 0.5786 111.19 110.88 111.46 7.6294E-06 240 39 8 0 0 0 1.6926E-24 3 69851 162.26 154.61 1 1.6005 1.8166 0 160360000 63595000 96764000 24123 2124 9111 9321 37798;37799;37800 37799 LTLDTIFVPNTGK 13 1 0 Unmodified _LTLDTIFVPNTGK_ 0 0 0 Q9Y277;E5RJN6;E5RHZ6;E5RK27;E5RFP6 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.9056 2 709.898117 1417.78168 72444.17 0.76535 0.00054332 0.13275 9.4239E-05 0.89811 0.00063756 709.898258333317 713.905270614206 110.57 0.59174 110.57 110.27 110.86 0 283 44 10 0 0 0 3.1185E-30 2 71055 168.3 147.95 1 1.5842 1.7985 0 141380000 51487000 89895000 24124 2124 9111 9321 37801;37802 37801 LTLDTIFVPNTGK 13 1 0 Unmodified _LTLDTIFVPNTGK_ 0 0 0 Q9Y277;E5RJN6;E5RHZ6;E5RK27;E5RFP6 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.9059 2 709.898117 1417.78168 71746.74 0.95105 0.00067515 0.22331 0.00015853 1.1744 0.00083368 709.898415391497 713.905332593573 122.4 0.50297 122.4 122.11 122.61 0 127 24 7 0 0 0 7.6128E-06 1 72944 103.08 92.254 1 2.9897 2.3307 0 15807000 5172400 10635000 24125 2124 9111 9321 37803 37803 LTLDTIFVPNTGK 13 1 0 Unmodified _LTLDTIFVPNTGK_ 0 0 0 Q9Y277;E5RJN6;E5RHZ6;E5RK27;E5RFP6 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.9064 2 709.898117 1417.78168 71687.91 0.92022 0.00065326 0.092829 6.5899E-05 1.013 0.00071916 709.898346596661 713.905217159097 122.15 0.49623 122.15 121.94 122.44 0 134 25 7 0 0 0 0.00013155 1 71872 79.82 65.613 1 2.848 2.2875 0 15363000 3156900 12206000 24126 2124 9111 9321 37804 37804 LTLEDLEDSWDR 12 0 1 Unmodified _LTLEDLEDSWDR_ 0 0 0 Q6P2Q9;B4DK16;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.3546 2 746.351728 1490.6889 70931.88 0.81645 0.00060936 -0.31331 -0.00023384 0.50314 0.00037552 746.351216241353 751.355332879094 114.38 0.49982 114.38 114.13 114.63 -7.6294E-06 113 33 6 0 0 0 0.00021727 1 74430 82.261 82.261 1 0.83427 0.84377 0 9632500 5784400 3848000 24127 1854 9112 9322 37805 37805 LTLHGLQQYYVK 12 1 0 Unmodified _LTLHGLQQYYVK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;A0A140T9X3;A0A140T996;A0A140T9X9;F6UJC5;A0A140TA18;H0Y400;H0YCC6;O00148;B4DX78;Q69YT6 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.9448 3 488.273276 1461.798 85905.64 0.13632 6.6562E-05 -0.27519 -0.00013437 -0.13886 -6.7804E-05 488.607428391973 490.944537166476 78.535 1.411 78.535 77.676 79.087 0 465 120 6 0 0 0 5.9084E-05 1 46455 77.124 77.124 1 1.4723 1.6547 0 69969000 28736000 41233000 24128 1359;362 9113 9323 37806 37806 LTLHGLQQYYVK 12 1 0 Unmodified _LTLHGLQQYYVK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;A0A140T9X3;A0A140T996;A0A140T9X9;F6UJC5;A0A140TA18;H0Y400;H0YCC6;O00148;B4DX78;Q69YT6 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.9449 3 488.273276 1461.798 85650.01 -0.022306 -1.0891E-05 0.011706 5.7159E-06 -0.010599 -5.1754E-06 488.273081738189 490.94474819519 76.326 0.85133 76.326 75.968 76.82 0 332 69 8 0 0 0 0.023375 1 45906 28.384 28.384 1 1.5324 1.7145 0 108800000 41977000 66825000 24129 1359;362 9113 9323 37807 37807 LTLHGLQQYYVK 12 1 0 Unmodified _LTLHGLQQYYVK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;A0A140T9X3;A0A140T996;A0A140T9X9;F6UJC5;A0A140TA18;H0Y400;H0YCC6;O00148;B4DX78;Q69YT6 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 490.9447 3 488.273276 1461.798 86175.11 0.36691 0.00017915 -0.36287 -0.00017718 0.0040446 1.9749E-06 488.273061780169 490.944477312393 89.237 0.65757 89.237 88.991 89.648 0 207 42 8 0 0 0 0.023418 1 49308 28.361 28.361 1 0.83713 0.65105 0 15433000 8261400 7171800 24130 1359;362 9113 9323 37808 37808 LTLISEDIK 9 1 0 Unmodified _LTLISEDIK_ 0 0 0 A8K3M3;P18031;B4DSN5 A8K3M3 A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.3027 2 516.30279 1030.59103 84020.55 0.26675 0.00013772 -0.46349 -0.0002393 -0.19675 -0.00010158 516.3029057211 520.310138732929 81.59 0.83119 81.59 81.204 82.036 7.6294E-06 223 72 6 0 0 0 0.008633 4 48600 60.91 49.689 1 1.1189 1.1349 0 27748000 12903000 14844000 24131 724 9114 9324 37809;37810;37811;37812 37812 LTLISEDIK 9 1 0 Unmodified _LTLISEDIK_ 0 0 0 A8K3M3;P18031;B4DSN5 A8K3M3 A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.3103 2 516.30279 1030.59103 84240.23 0.39311 0.00020296 -0.60381 -0.00031175 -0.2107 -0.00010879 516.302558882992 520.309967110473 80.582 1.1507 80.582 79.939 81.09 0 226 92 5 0 0 0 0.028936 2 48966 46.462 46.462 1 1.0703 1.1541 0 21753000 15053000 6700300 24132 724 9114 9324 37813;37814 37813 LTLISEDIK 9 1 0 Unmodified _LTLISEDIK_ 0 0 0 A8K3M3;P18031;B4DSN5 A8K3M3 A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.3108 2 516.30279 1030.59103 85732.98 0.43412 0.00022414 -0.423 -0.00021839 0.011124 5.7436E-06 516.302599251721 520.310124786639 93.327 0.74908 93.327 93.008 93.757 0 134 44 5 0 0 0 0.045082 1 52072 40.002 30.414 1 0.55969 0.45856 0 2537900 1628000 909960 24133 724 9114 9324 37815 37815 LTLLNPK 7 1 0 Unmodified _LTLLNPK_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 399.7578 2 399.757821 797.501089 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.664 1 58.664 58.164 59.164 0 0 0 0 0.014517 1 34122 86.086 8.338 1 24134 89 9115 9325 37816 37816 LTLLQVASR 9 0 1 Unmodified _LTLLQVASR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.8115 2 500.811116 999.60768 84914.38 0.54436 0.00027262 -0.08094 -4.0536E-05 0.46341 0.00023208 500.811073873926 505.815106790078 84.784 0.78789 84.784 84.489 85.277 0 267 65 5 0 0 0 4.9102E-08 1 50777 145.16 46.159 1 0.82614 0.94142 0 117770000 61420000 56354000 24135 1803 9116 9326 37817 37817 LTLLQVASR 9 0 1 Unmodified _LTLLQVASR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.811 2 500.811116 999.60768 85725.53 0.53386 0.00026736 -0.078562 -3.9345E-05 0.45529 0.00022802 500.810980077664 505.815171080909 83.728 0.83516 83.728 83.325 84.16 0 257 67 7 0 0 0 1.3178E-05 2 51209 124.08 46.339 1 0.89506 1.021 0 95179000 48525000 46654000 24136 1803 9116 9326 37818;37819 37819 LTLLQVASR 9 0 1 Unmodified _LTLLQVASR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.8153 2 500.811116 999.60768 85935.16 0.61758 0.00030929 -0.12213 -6.1165E-05 0.49544 0.00024812 500.811063923368 505.815083753437 96.855 1.0386 96.855 96.521 97.56 7.6294E-06 266 54 8 0 0 0 0.0018407 2 54330 80.165 39.952 1 1.5236 1.2725 0 23628000 8574400 15053000 24137 1803 9116 9326 37820;37821 37820 LTLLQVASR 9 0 1 Unmodified _LTLLQVASR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.8119 2 500.811116 999.60768 86526.86 0.076556 3.834E-05 0.13999 7.0111E-05 0.21655 0.00010845 500.811179541285 505.815187968187 96.681 1.3029 96.681 96.313 97.616 -7.6294E-06 274 65 8 0 0 0 0.0022437 2 53389 74.92 30.427 1 1.5441 1.3038 0 17881000 6481100 11400000 24138 1803 9116 9326 37822;37823 37822 LTLPHSIR 8 0 1 Unmodified _LTLPHSIR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 312.859 3 312.859027 935.55525 105695.9 -0.19814 -6.1991E-05 0.23589 7.3801E-05 0.037748 1.181E-05 312.859053554416 316.195086292149 50.168 0.93431 50.168 49.859 50.794 0 509 89 8 0 0 0 0.0026473 2 27607 77.923 42.567 1 0.6472 0.76705 0 509460000 329200000 180270000 24139 1415 9117 9327 37824;37825 37825 LTLPHSIR 8 0 1 Unmodified _LTLPHSIR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 312.8592 3 312.859027 935.55525 104840.8 0.5396 0.00016882 -0.12174 -3.8088E-05 0.41786 0.00013073 312.858993343763 316.194980274861 48.304 1.1903 48.304 48.026 49.217 0 451 90 8 0 0 0 0.003178 2 26885 72.492 44.61 1 0.64748 0.7558 0 530320000 304420000 225900000 24140 1415 9117 9327 37826;37827 37826 LTLPHSIR 8 0 1 Unmodified _LTLPHSIR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.7854 2 468.784902 935.55525 86981.24 0.54628 0.00025609 0.069082 3.2385E-05 0.61536 0.00028847 468.784816723425 473.788868393943 48.304 0.82346 48.304 48.054 48.877 0 259 60 6 0 0 0 0.012176 1 26962 75.109 60.952 1 0.66989 0.76637 0 160660000 93324000 67334000 24141 1415 9117 9327 37828 37828 LTLPHSIR 8 0 1 Unmodified _LTLPHSIR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 312.859 3 312.859027 935.55525 104378.3 0.0099467 3.1119E-06 -0.014601 -4.5679E-06 -0.0046538 -1.456E-06 312.859060718565 316.195018036933 57.661 1.1641 57.661 57.301 58.465 0 462 88 8 0 0 0 0.054967 1 29106 22.086 13.866 1 0.66035 0.5695 0 74767000 44811000 29956000 24142 1415 9117 9327 37829 37829 LTLPHSIR 8 0 1 Unmodified _LTLPHSIR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.7893 2 468.784902 935.55525 89125.09 0.31749 0.00014883 0.12061 5.6542E-05 0.4381 0.00020538 468.784899911029 473.789026258043 57.664 1.0748 57.664 57.34 58.415 0 385 81 8 0 0 0 0.006912 2 29214 85.212 58.61 1 0.68257 0.57828 0 31806000 19407000 12399000 24143 1415 9117 9327 37830;37831 37831 LTLPHSIR 8 0 1 Unmodified _LTLPHSIR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 316.1949 3 312.859027 935.55525 103967.9 -0.08453 -2.6446E-05 -0.055085 -1.7234E-05 -0.13962 -4.368E-05 312.859046211458 316.194996832633 57.786 1.3594 57.786 57.459 58.818 0 526 101 9 0 0 0 0.017158 2 28559 36.557 20.675 1 0.70337 0.61391 0 83928000 49763000 34164000 24144 1415 9117 9327 37832;37833 37832 LTLPHSIR 8 0 1 Unmodified _LTLPHSIR_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.7852 2 468.784902 935.55525 90072.64 0.30425 0.00014263 -0.2004 -9.3944E-05 0.10385 4.8684E-05 468.784813411004 473.788825926168 57.783 1.166 57.783 57.501 58.667 -3.8147E-06 400 86 8 0 0 0 0.0075918 2 28670 91.9 64.938 1 0.7125 0.6215 0 34934000 20707000 14227000 24145 1415 9117 9327 37834;37835 37834 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.8105 2 515.810782 1029.60701 86032.93 0.48423 0.00024977 -0.076225 -3.9318E-05 0.408 0.00021045 515.810709235212 519.817733138049 104.35 1.0308 104.35 103.76 104.79 -7.6294E-06 365 85 6 0 0 0 0.0038105 2 64150 62.823 0 1 1.4569 1.647 0 104860000 42033000 62825000 24146 639 9118 9328 37836;37837 37837 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.8181 2 515.810782 1029.60701 84797.74 0.57606 0.00029714 -0.58081 -0.00029959 -0.0047541 -2.4522E-06 515.810313588001 519.817659459237 108.37 1.3024 108.37 107.55 108.85 7.6294E-06 547 94 8 0 0 0 3.8375E-08 3 67343 118.18 0 1 1.513 1.7784 0 312150000 125860000 186300000 24147 639 9118 9328 37838;37839;37840 37838 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.6284 2 515.810782 1029.60701 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.11 1 109.11 108.61 109.61 7.6294E-06 0 0 0 0.027213 1 68255 51.445 0 1 24148 639 9118 9328 37841 37841 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1038.6595 1 1030.61429 1029.60701 61296.16 0.66545 0.00068582 -0.06969 -7.1824E-05 0.59576 0.00061399 1030.6139568322 1038.62838623034 108.25 0.54163 108.25 108.04 108.58 -7.6294E-06 139 41 6 0 0 0 0.020566 1 67770 73.985 0 1 1.3393 1.3449 0 26927000 11453000 15474000 24149 639 9118 9328 37842 37842 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.8181 2 515.810782 1029.60701 90773 0.7655 0.00039485 0.35719 0.00018424 1.1227 0.00057909 515.810722839685 519.817862605829 102.81 0.63139 102.81 102.38 103.02 0 118 49 4 0 0 0 0.020014 1 64771 46.819 0 1 1.7926 1.8501 0 18325000 5029300 13296000 24150 639 9118 9328 37843 37843 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.818 2 515.810782 1029.60701 85957.92 0.22749 0.00011734 0.24789 0.00012786 0.47538 0.0002452 515.810907864396 519.817891528503 103.41 0.82327 103.41 103 103.83 0 349 68 7 0 0 0 0.00013082 2 65352 96.331 0 1 1.5004 1.758 0 316240000 121320000 194920000 24151 639 9118 9328 37844;37845 37845 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.8105 2 515.810782 1029.60701 84532.92 0.56176 0.00028976 -0.63831 -0.00032925 -0.076552 -3.9486E-05 515.810255783859 519.817652966639 107.52 1.2658 107.52 106.79 108.06 0 476 89 9 0 0 0 0.00022723 3 68910 93.178 0 1 1.5528 1.8101 0 255800000 95835000 159960000 24152 639 9118 9328 37846;37847;37848 37847 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1031.151 1 1030.61429 1029.60701 61382.52 0.50333 0.00051874 -0.010898 -1.1232E-05 0.49243 0.00050751 1030.61403057167 1038.62856846445 107.56 0.68086 107.56 107.22 107.9 0 184 47 5 0 0 0 0.019045 1 68751 85.676 0 1 1.6067 1.6354 0 30556000 12068000 18489000 24153 639 9118 9328 37849 37849 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 519.8174 2 515.810782 1029.60701 85253.23 0.26849 0.00013849 0.12396 6.394E-05 0.39245 0.00020243 515.810765845793 519.817817888552 116.41 0.57658 116.41 116.12 116.69 7.6294E-06 103 24 7 0 0 0 9.6112E-06 2 68387 105.52 0 1 2.7381 2.1919 0 8623200 2720700 5902400 24154 639 9118 9328 37850;37851 37850 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.8115 2 515.810782 1029.60701 83549.55 0.50229 0.00025909 -0.082472 -4.254E-05 0.41982 0.00021655 515.810678855514 519.81784916824 119.95 0.66743 119.95 119.65 120.32 0 166 31 8 0 0 0 0.00060252 2 71172 84.213 0 1 1.9919 1.6203 0 30013000 9741700 20272000 24155 639 9118 9328 37852;37853 37853 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.8178 2 515.810782 1029.60701 NaN NaN NaN -0.0068677 -3.5424E-06 NaN NaN NaN NaN 116.2 0.60856 116.2 115.9 116.51 0 0 0 0 0.0040971 1 67355 73.985 0 1 NaN NaN 0 7582900 0 7582900 24156 639 9118 9328 37854 37854 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.3106 2 515.810782 1029.60701 NaN NaN NaN -0.3657 -0.00018863 NaN NaN NaN NaN 119.79 0.62888 119.79 119.36 119.98 0 0 0 0 0.017622 1 69907 55.461 0 1 NaN NaN 0 9188000 9188000 0 24157 639 9118 9328 37855 37855 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.818 2 515.810782 1029.60701 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.55 1 119.55 119.05 120.05 0 0 0 0 2.8552E-05 1 69914 91.867 0 1 24158 639 9118 9328 37856 37856 LTLSALVDGK 10 1 0 Unmodified _LTLSALVDGK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.8031 2 508.802957 1015.59136 85782.13 0.54158 0.00027556 -0.27804 -0.00014147 0.26353 0.00013409 508.802876223772 512.809785259193 93.627 0.8634 93.627 93.418 94.282 0 373 77 8 0 0 0 0.00015618 2 56830 95.502 41.344 1 2.0918 2.4715 0 386560000 120340000 266220000 24159 28 9119 9329 37857;37858 37857 LTLSALVDGK 10 1 0 Unmodified _LTLSALVDGK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.8101 2 508.802957 1015.59136 85882.64 0.46171 0.00023492 -0.28327 -0.00014413 0.17844 9.079E-05 508.802987968218 512.80971822015 92.574 1.3349 92.574 91.945 93.28 0 521 113 8 0 0 0 0.00013082 3 57627 96.331 43.615 1 2.1718 2.5579 0 509780000 154270000 355510000 24160 28 9119 9329 37859;37860;37861 37860 LTLSALVDGK 10 1 0 Unmodified _LTLSALVDGK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 512.8101 2 508.802957 1015.59136 86386.09 0.56004 0.00028495 -0.19303 -9.8216E-05 0.36701 0.00018673 508.80281099637 512.809849151858 107 0.80782 107 106.65 107.45 -7.6294E-06 244 50 7 0 0 0 0.00023762 2 61109 92.838 47.158 1 3.1521 2.6679 0 58761000 14470000 44291000 24161 28 9119 9329 37862;37863 37862 LTLSALVDGK 10 1 0 Unmodified _LTLSALVDGK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 508.8029 2 508.802957 1015.59136 85364.96 0.45005 0.00022898 0.0090488 4.6041E-06 0.45909 0.00023359 508.802888891712 512.809974512436 106.92 0.92741 106.92 106.43 107.36 0 252 59 7 0 0 0 0.0016591 2 60239 72.643 32.821 1 2.9911 2.4616 0 28321000 6884800 21437000 24162 28 9119 9329 37864;37865 37865 LTLTSR 6 0 1 Unmodified _LTLTSR_ 0 0 0 A0A140VJQ4;P04181 A0A140VJQ4 A0A140VJQ4 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 345.711 2 345.710871 689.407189 102851.4 0.003148 1.0883E-06 -0.037963 -1.3124E-05 -0.034815 -1.2036E-05 345.710817611323 350.714865047951 27.512 0.71337 27.512 27.276 27.99 -1.9073E-06 183 44 7 0 0 0 0.034838 1 12645 126.68 0 1 1.2902 1.5118 0 213470000 96949000 116520000 24163 607 9120 9330 37866 37866 LTLTSR 6 0 1 Unmodified _LTLTSR_ 0 0 0 A0A140VJQ4;P04181 A0A140VJQ4 A0A140VJQ4 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 345.711 2 345.710871 689.407189 101140.1 0.038873 1.3439E-05 0.20557 7.1069E-05 0.24445 8.4508E-05 345.710866656831 350.714936092844 27.125 0.45476 27.125 26.946 27.401 0 78 22 6 0 0 0 0.0043028 1 12444 142.63 0 1 1.1733 1.3398 0 91353000 45520000 45833000 24164 607 9120 9330 37867 37867 LTMQVSSLQR 10 0 1 Oxidation (M) _LTM(ox)QVSSLQR_ LTM(1)QVSSLQR LTM(118.71)QVSSLQR 0 1 0 B4DNW3;P35659;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.8174 2 589.81353 1177.61251 78813.55 0.90963 0.00053651 -0.49313 -0.00029085 0.4165 0.00024566 589.813352053815 594.81729663827 33.576 1.2074 33.576 32.996 34.203 0 525 117 8 0 0 0 1.7308E-08 2 16588 118.71 101.48 1 0.82811 0.94703 0 127390000 71449000 55938000 24165 1546;1018 9121 9331 37868;37869 37868 806 LTMQVSSLQR 10 0 1 Oxidation (M) _LTM(ox)QVSSLQR_ LTM(1)QVSSLQR LTM(103.19)QVSSLQR 0 1 0 B4DNW3;P35659;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.8179 2 589.81353 1177.61251 78813.56 0.55622 0.00032807 -0.36445 -0.00021496 0.19177 0.00011311 589.813440794814 594.817264041303 34.004 0.6915 34.004 33.682 34.374 0 280 65 6 0 0 0 6.159E-06 1 17010 103.19 77.456 1 0.73871 0.84252 0 120060000 67860000 52199000 24166 1546;1018 9121 9331 37870 37870 806 LTMQVSSLQR 10 0 1 Oxidation (M) _LTM(ox)QVSSLQR_ LTM(1)QVSSLQR LTM(146.88)QVSSLQR 0 1 0 B4DNW3;P35659;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.8179 2 589.81353 1177.61251 77286.52 0.40524 0.00023902 -0.54393 -0.00032082 -0.13869 -8.1803E-05 589.81334868824 594.817319213685 33.023 0.57434 33.023 32.622 33.197 0 304 52 8 0 0 0 1.5049E-12 2 16393 146.88 122.11 1 0.84066 0.96765 0 213150000 120810000 92345000 24167 1546;1018 9121 9331 37871;37872 37871 806 LTMQVSSLQR 10 0 1 Oxidation (M) _LTM(ox)QVSSLQR_ LTM(1)QVSSLQR LTM(67.21)QVSSLQR 0 1 0 B4DNW3;P35659;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.8137 2 589.81353 1177.61251 77980.22 0.47216 0.00027849 -0.39127 -0.00023078 0.080893 4.7712E-05 589.813537238892 594.817529842544 38.41 0.48757 38.41 38.116 38.604 0 223 34 9 0 0 0 0.0013808 2 17320 67.207 47.995 1 0.54378 0.46231 0 34437000 21627000 12810000 24168 1546;1018 9121 9331 37873;37874 37873 806 LTMQVSSLQR 10 0 1 Oxidation (M) _LTM(ox)QVSSLQR_ LTM(1)QVSSLQR LTM(51.28)QVSSLQR 0 1 0 B4DNW3;P35659;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.8141 2 589.81353 1177.61251 78944.3 0.45597 0.00026894 0.78871 0.00046519 1.2447 0.00073413 589.813525720458 594.817817358002 72.438 0.86449 72.438 72.053 72.918 0 239 65 6 0 0 0 0.0057972 2 38156 51.276 37.697 1 1.0532 0.90611 0 6991000 3738100 3252900 24169 1546;1018 9121 9331 37875;37876 37875 806 LTMQVSSLQR 10 0 1 Oxidation (M) _LTM(ox)QVSSLQR_ LTM(1)QVSSLQR LTM(106.18)QVSSLQR 0 1 0 B4DNW3;P35659;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.8174 2 589.81353 1177.61251 76931.99 0.30147 0.00017781 -0.31791 -0.00018751 -0.016444 -9.6989E-06 589.81346308921 594.817486032979 38.577 0.51828 38.577 38.259 38.777 0 277 39 10 0 0 0 4.2321E-06 2 16981 106.18 85.478 1 0.57131 0.49835 0 30178000 19301000 10877000 24170 1546;1018 9121 9331 37877;37878 37878 806 LTMQVSSLQR 10 0 1 Oxidation (M) _LTM(ox)QVSSLQR_ LTM(1)QVSSLQR LTM(68.56)QVSSLQR 0 1 0 B4DNW3;P35659;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.8184 2 589.81353 1177.61251 77206.35 0.3992 0.00023545 0.66374 0.00039148 1.0629 0.00062693 589.813634022353 594.81806646457 72.874 1.1102 72.874 72.38 73.49 0 277 88 6 0 0 0 0.0012374 2 37671 68.557 54.439 1 1.0013 0.83481 0 6726100 3379300 3346900 24171 1546;1018 9121 9331 37879;37880 37880 806 LTMQVSSLQR 10 0 1 Unmodified _LTMQVSSLQR_ 0 0 0 B4DNW3;P35659;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.8163 2 581.816073 1161.61759 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.152 1 61.152 60.652 61.652 -3.8147E-06 0 0 0 0.045624 1 35810 52.579 12.476 1 24172 1546;1018 9121 9332 37881 37881 LTMQVSSLQR 10 0 1 Unmodified _LTMQVSSLQR_ 0 0 0 B4DNW3;P35659;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.8205 2 581.816073 1161.61759 79175.77 0.45075 0.00026225 -0.14657 -8.5279E-05 0.30417 0.00017697 581.816035570666 586.82015222244 72.46 0.96914 72.46 72.064 73.033 0 361 71 8 0 0 0 0.0016602 1 38096 72.638 38.385 1 0.89824 0.75109 0 24185000 12527000 11658000 24173 1546;1018 9121 9332 37882 37882 LTMQVSSLQR 10 0 1 Unmodified _LTMQVSSLQR_ 0 0 0 B4DNW3;P35659;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.8202 2 581.816073 1161.61759 78789.02 0.31732 0.00018462 -0.04168 -2.425E-05 0.27565 0.00016037 581.816140064774 586.820350433469 72.854 0.91168 72.854 72.457 73.369 0 395 72 8 0 0 0 0.0015966 2 37559 72.928 50.842 1 0.90572 0.78412 0 23415000 12999000 10416000 24174 1546;1018 9121 9332 37883;37884 37884 LTNAGYDYLALK 12 1 0 Unmodified _LTNAGYDYLALK_ 0 0 0 Q9BVS4 Q9BVS4 Q9BVS4 RIOK2 Serine/threonine-protein kinase RIO2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.3649 2 671.356085 1340.69762 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.468 1 86.468 85.968 86.968 7.6294E-06 0 0 0 0.0027351 1 52069 67.726 45.64 1 24175 2010 9122 9333 37885 37885 LTNAGYDYLALK 12 1 0 Unmodified _LTNAGYDYLALK_ 0 0 0 Q9BVS4 Q9BVS4 Q9BVS4 RIOK2 Serine/threonine-protein kinase RIO2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3561 2 671.356085 1340.69762 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.559 1 86.559 86.059 87.059 0 0 0 0 0.011808 1 52140 56.043 35.343 1 24176 2010 9122 9333 37886 37886 LTPEEEEILNK 11 1 0 Unmodified _LTPEEEEILNK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.85 2 657.843007 1313.67146 74193.61 0.47471 0.00031228 -0.0018885 -1.2423E-06 0.47282 0.00031104 657.843186218199 661.849990743563 64.758 1.697 64.758 64.337 66.034 0 1176 154 12 0 0 0 2.7847E-08 4 37043 120.99 120.99 1 0.77066 0.92769 0 1288200000 751090000 537150000 24177 1635 9123 9334 37887;37888;37889;37890 37888 LTPEEEEILNK 11 1 0 Unmodified _LTPEEEEILNK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.851 2 657.843007 1313.67146 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.689 1 66.689 66.189 67.189 0 0 0 0 0.0068943 1 38494 62.823 41.359 1 24178 1635 9123 9334 37891 37891 LTPEEEEILNK 11 1 0 Unmodified _LTPEEEEILNK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.8431 2 657.843007 1313.67146 73735.02 0.5694 0.00037457 0.070181 4.6168E-05 0.63958 0.00042074 657.843242256762 661.85001140768 63.652 1.9356 63.652 63.249 65.185 0 1158 171 12 0 0 0 3.0806E-10 5 37746 133.13 121.64 1 0.75573 0.89267 0 1203700000 680770000 522900000 24179 1635 9123 9334 37892;37893;37894;37895;37896 37895 LTPEEEEILNK 11 1 0 Unmodified _LTPEEEEILNK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.8501 2 657.843007 1313.67146 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.322 1 65.322 64.822 65.822 0 0 0 0 0.0079587 1 38527 61.56 44.047 1 24180 1635 9123 9334 37897 37897 LTPEEEEILNK 11 1 0 Unmodified _LTPEEEEILNK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.8503 2 657.843007 1313.67146 74288.87 0.71934 0.00047322 -0.19934 -0.00013113 0.52001 0.00034208 657.843220823616 661.849889631198 74.959 3.9042 74.959 74.41 78.315 0 1279 271 12 0 0 0 0.00093586 5 40173 71.349 63.492 1 0.90691 0.80817 0 417530000 212020000 205510000 24181 1635 9123 9334 37898;37899;37900;37901;37902 37900 LTPEEEEILNK 11 1 0 Unmodified _LTPEEEEILNK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.8504 2 657.843007 1313.67146 74284.85 0.48247 0.00031739 -0.050997 -3.3548E-05 0.43147 0.00028384 657.843279600271 661.849962624858 75.379 2.7964 75.379 74.974 77.771 -7.6294E-06 1113 193 11 0 0 0 3.5611E-08 6 39601 119.75 111.21 1 0.90779 0.78878 0 312390000 161700000 150690000 24182 1635 9123 9334 37903;37904;37905;37906;37907;37908 37905 LTPEEEEILNK 11 1 0 Unmodified _LTPEEEEILNK_ 0 0 0 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.8503 2 657.843007 1313.67146 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.46 1 77.46 76.96 77.96 0 0 0 0 0.042997 1 40631 44.318 25.047 1 24183 1635 9123 9334 37909 37909 LTPEEEEILNKK 12 2 0 Unmodified _LTPEEEEILNKK_ 0 0 1 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.5964 3 481.596085 1441.76642 87559.84 0.32618 0.00015709 0.19164 9.2292E-05 0.51781 0.00024938 481.596091129411 486.938929211675 49.325 0.67585 49.325 49.119 49.794 0 181 43 8 0 0 0 0.00042439 2 27001 60.49 60.49 1 0.79726 0.94065 0 182570000 100110000 82466000 24184 1635 9124 9335 37910;37911 37910 LTPEEEEILNKK 12 2 0 Unmodified _LTPEEEEILNKK_ 0 0 1 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.8915 2 721.890489 1441.76642 73669.65 0.87925 0.00063473 0.023936 1.7279E-05 0.90319 0.000652 721.89067850412 729.903886194963 49.353 0.24125 49.353 49.204 49.445 0 75 16 7 0 0 0 0.024687 1 27052 51.927 47.909 1 0.71828 0.85299 0 25474000 14881000 10593000 24185 1635 9124 9335 37912 37912 LTPEEEEILNKK 12 2 0 Unmodified _LTPEEEEILNKK_ 0 0 1 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.5954 3 481.596085 1441.76642 88391.5 0.26953 0.0001298 -0.62915 -0.000303 -0.35962 -0.00017319 481.595594617264 486.93859692822 48.013 0.88012 48.013 47.718 48.598 0 248 61 6 0 0 0 0.023396 1 26615 25.53 25.53 1 0.83875 0.97207 0 64045000 29227000 34818000 24186 1635 9124 9335 37913 37913 LTPEEEEILNKK 12 2 0 Unmodified _LTPEEEEILNKK_ 0 0 1 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.9388 3 481.596085 1441.76642 85552.28 0.26066 0.00012553 -0.42453 -0.00020445 -0.16387 -7.8917E-05 481.595864148408 486.938682157222 57.699 1.5134 57.699 57.42 58.934 3.8147E-06 504 114 10 0 0 0 0.0040666 2 29189 35.737 35.737 1 0.87556 0.74273 0 53519000 28109000 25410000 24187 1635 9124 9335 37914;37915 37915 LTPEEEEILNKK 12 2 0 Unmodified _LTPEEEEILNKK_ 0 0 1 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.8907 2 721.890489 1441.76642 71522.19 0.7504 0.00054171 0.34331 0.00024783 1.0937 0.00078954 721.890546831219 729.904787001579 57.681 0.59887 57.681 57.462 58.061 0 222 43 8 0 0 0 0.0091296 1 29237 60.342 60.342 1 0.8499 0.72667 0 11717000 5918400 5798300 24188 1635 9124 9335 37916 37916 LTPEEEEILNKK 12 2 0 Unmodified _LTPEEEEILNKK_ 0 0 1 Q5JR94;P62241;Q5JR95;Q9BS10 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.596 3 481.596085 1441.76642 85409.41 0.28325 0.00013641 -0.49942 -0.00024052 -0.21617 -0.00010411 481.595850132429 486.93862065921 58.103 1.2311 58.103 57.842 59.073 3.8147E-06 472 94 10 0 0 0 0.02185 1 28790 26.541 26.541 1 0.87479 0.7451 0 42958000 22300000 20658000 24189 1635 9124 9335 37917 37917 LTPLGYHLASLPVDVR 16 0 1 Unmodified _LTPLGYHLASLPVDVR_ 0 0 0 Q6P158;Q59G60;H7C109 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.6686 3 584.333195 1749.97776 81212.58 0.78647 0.00045956 0.42833 0.00025029 1.2148 0.00070985 584.667777488559 588.004414635461 117.73 0.59567 117.73 117.43 118.02 0 88 26 8 0 0 0 0.00051379 3 69445 44.196 44.196 1 1.285 1.0743 0 3598200 1610400 1987800 24190 1850 9125 9336 37918;37919;37920 37920 LTPLGYHLASLPVDVR 16 0 1 Unmodified _LTPLGYHLASLPVDVR_ 0 0 0 Q6P158;Q59G60;H7C109 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.6685 3 584.333195 1749.97776 81823.99 0.45764 0.00026742 0.95578 0.0005585 1.4134 0.00082591 584.667766441959 588.004561731006 117.54 0.35458 117.54 117.3 117.66 0 50 15 5 0 0 0 0.00054285 2 68366 43.791 40.243 1 1.6117 1.3692 0 2978800 1431900 1546900 24191 1850 9125 9336 37921;37922 37922 LTPLSHEVISR 11 0 1 Unmodified _LTPLSHEVISR_ 0 0 0 P41091;Q2VIR3;F8W810;H7BZU1 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 421.2427 3 417.906705 1250.69829 91670.9 0.1897 7.9276E-05 -0.16398 -6.8529E-05 0.025716 1.0747E-05 417.906430975345 421.242701377343 48.072 0.51745 48.072 47.838 48.356 3.8147E-06 177 44 6 0 0 0 2.285E-05 2 26136 86.313 61.459 1 1.8879 1.9171 0 29133000 9749400 19384000 24192 1559 9126 9337 37923;37924 37924 LTPLTVLLR 9 0 1 Unmodified _LTPLTVLLR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.3435 2 513.33951 1024.66447 85039.88 0.71581 0.00036746 -0.2045 -0.00010498 0.51132 0.00026248 513.339350793433 518.343389936221 114.98 0.6572 114.98 114.66 115.32 0 173 42 5 0 0 0 0.00079176 2 72911 94.302 73.002 1 0.91621 0.93204 0 29722000 14638000 15084000 24193 162 9127 9338 37925;37926 37926 LTPLTVLLR 9 0 1 Unmodified _LTPLTVLLR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.3399 2 513.33951 1024.66447 85133.59 0.59899 0.00030749 -0.22097 -0.00011344 0.37802 0.00019405 513.339323768644 518.34339556881 114.2 0.66815 114.2 113.92 114.59 0 189 46 7 0 0 0 0.0047844 2 74126 68.383 59.964 1 0.95334 0.95589 0 17884000 9171700 8712400 24194 162 9127 9338 37927;37928 37927 LTPLTVLLR 9 0 1 Unmodified _LTPLTVLLR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.3439 2 513.33951 1024.66447 85149.05 0.60347 0.00030978 0.039082 2.0062E-05 0.64255 0.00032984 513.339389253505 518.343602462472 126.76 0.71712 126.76 126.4 127.11 0 118 28 6 0 0 0 0.021548 2 76151 49.418 47.358 1 1.8803 1.6049 0 5678900 1931300 3747600 24195 162 9127 9338 37929;37930 37929 LTPLTVLLR 9 0 1 Unmodified _LTPLTVLLR_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.3395 2 513.33951 1024.66447 84422.07 0.39018 0.00020029 -0.035637 -1.8294E-05 0.35454 0.000182 513.339398825434 518.343552915588 126.43 0.72298 126.43 126.1 126.82 0 126 30 6 0 0 0 0.029769 2 75097 46.129 44.071 1 1.8565 1.5402 0 5242900 1931400 3311400 24196 162 9127 9338 37931;37932 37932 LTPSGYEWGR 10 0 1 Unmodified _LTPSGYEWGR_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.2858 2 583.285463 1164.55637 NaN NaN NaN 0.25982 0.00015155 NaN NaN NaN NaN 58.323 0.53114 58.323 57.973 58.504 0 0 0 0 0.0039971 1 33052 74.376 64.389 1 NaN NaN 0 9199600 9199600 0 24197 1854 9128 9339 37933 37933 LTPSGYEWGR 10 0 1 Unmodified _LTPSGYEWGR_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.2858 2 583.285463 1164.55637 79975.79 0.4954 0.00028896 -0.24295 -0.00014171 0.25245 0.00014725 583.285164070124 588.289306519131 57.134 0.75826 57.134 56.665 57.423 0 211 57 6 0 0 0 0.0010607 1 33097 76.827 66.84 1 2.0701 2.3512 0 48731000 21045000 27686000 24198 1854 9128 9339 37934 37934 LTPTSVLDYFGTGSVQR 17 0 1 Unmodified _LTPTSVLDYFGTGSVQR_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.9819 2 920.975615 1839.93668 63258.62 0.66434 0.00061184 0.63181 0.00058188 1.2961 0.0011937 920.976029455121 925.980620893825 117.93 0.43181 117.93 117.67 118.1 0 99 25 5 0 0 0 0.00017982 1 75625 51.774 51.774 1 0.55193 0.57891 0 12146000 7855900 4290300 24199 1542 9129 9340 37935 37935 LTPTSVLDYFGTGSVQR 17 0 1 Unmodified _LTPTSVLDYFGTGSVQR_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.981 2 920.975615 1839.93668 NaN NaN NaN 0.33701 0.00031038 NaN NaN NaN NaN 117.41 0.37174 117.41 117.22 117.6 7.6294E-06 0 0 0 0.041392 1 77023 34.179 20.751 1 NaN NaN 0 4905600 0 4905600 24200 1542 9129 9340 37936 37936 LTPTSVLDYFGTGSVQR 17 0 1 Unmodified _LTPTSVLDYFGTGSVQR_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 925.9816 2 920.975615 1839.93668 63269.98 0.63862 0.00058816 0.3041 0.00028007 0.94272 0.00086822 921.477616370668 925.97981072225 129.94 0.48076 129.94 129.72 130.2 0 131 22 8 0 0 0 0.0010773 1 78625 43.382 43.382 1 0.68497 0.58275 0 5375200 3482800 1892300 24201 1542 9129 9340 37937 37937 LTPTSVLDYFGTGSVQR 17 0 1 Unmodified _LTPTSVLDYFGTGSVQR_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 925.9804 2 920.975615 1839.93668 64091.84 0.82953 0.00076398 0.87543 0.00080625 1.705 0.0015702 920.976260079403 926.481757202846 129.81 0.4395 129.81 129.57 130.01 0 84 14 7 0 0 0 0.00083091 1 77635 45.115 45.115 1 0.6439 0.53424 0 5596300 3372000 2224300 24202 1542 9129 9340 37938 37938 LTPVPDSFFAK 11 1 0 Unmodified _LTPVPDSFFAK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.3369 2 611.329339 1220.64412 79372.96 0.28553 0.00017455 0.016409 1.0031E-05 0.30194 0.00018459 611.328915241233 615.336426334351 97.817 0.72359 97.817 97.424 98.147 0 291 58 8 0 0 0 0.038119 1 61095 36.334 36.334 1 0.80905 0.83687 0 18565000 10295000 8270100 24203 1418 9130 9341 37939 37939 LTPVRPAAASPIVSGAR 17 0 2 Unmodified _LTPVRPAAASPIVSGAR_ 0 0 1 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.3281 3 554.993173 1661.95769 82981.3 0.50406 0.00027975 -0.13501 -7.4931E-05 0.36905 0.00020482 554.992990010529 561.999472030502 58.715 0.66248 58.715 58.447 59.109 3.8147E-06 221 53 7 0 0 0 0.022153 1 33403 22.435 15.864 1 0.54013 0.58502 0 24091000 14100000 9991300 24204 1323 9131 9342 37940 37940 LTPVRPAAASPIVSGAR 17 0 2 Unmodified _LTPVRPAAASPIVSGAR_ 0 0 1 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.0004 3 554.993173 1661.95769 81675.63 0.3803 0.00021106 0.23432 0.00013005 0.61462 0.00034111 554.993178060162 561.665358815172 57.25 0.54873 57.25 56.962 57.51 3.8147E-06 202 41 7 0 0 0 0.00022271 1 33099 47.568 37.287 1 0.63924 0.6924 0 17040000 10161000 6878900 24205 1323 9131 9342 37941 37941 LTPVRPAAASPIVSGAR 17 0 2 Unmodified _LTPVRPAAASPIVSGAR_ 0 0 1 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.9933 3 554.993173 1661.95769 82124.31 0.46824 0.00025987 -0.0942 -5.228E-05 0.37404 0.00020759 554.992977593999 561.665351666111 68.348 0.5349 68.348 68.051 68.586 0 190 38 8 0 0 0 0.017786 1 34849 23.1 12.819 1 0.48331 0.43694 0 3197300 2092400 1104800 24206 1323 9131 9342 37942 37942 LTPVSPESSSTEEK 14 1 0 Unmodified _LTPVSPESSSTEEK_ 0 0 0 Q13501;B4E3V2;E7EMC7 Q13501 Q13501 SQSTM1 Sequestosome-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.8727 2 745.864668 1489.71478 NaN NaN NaN -0.56819 -0.00042379 NaN NaN NaN NaN 33.372 0.57224 33.372 33.052 33.624 0 0 0 0 0.0014292 1 16623 71.153 38.313 1 NaN NaN 0 8748700 0 8748700 24207 1714 9132 9343 37943 37943 LTPVSPESSSTEEK 14 1 0 Unmodified _LTPVSPESSSTEEK_ 0 0 0 Q13501;B4E3V2;E7EMC7 Q13501 Q13501 SQSTM1 Sequestosome-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.8705 2 745.864668 1489.71478 69818.4 0.33355 0.00024879 0.11083 8.2664E-05 0.44438 0.00033145 745.8655276619 749.871229439631 32.89 0.65028 32.89 32.534 33.184 0 193 60 6 0 0 0 0.00015006 2 16353 96.229 89.101 1 4.1855 4.2066 0 27325000 5919800 21405000 24208 1714 9132 9343 37944;37945 37944 LTPVSPESSSTEEK 14 1 0 Unmodified _LTPVSPESSSTEEK_ 0 0 0 Q13501;B4E3V2;E7EMC7 Q13501 Q13501 SQSTM1 Sequestosome-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 745.8644 2 745.864668 1489.71478 71425.12 0.71359 0.00053224 -0.30776 -0.00022955 0.40582 0.00030269 745.864458664172 749.871404785067 38.207 0.38754 38.207 38.03 38.417 0 120 30 5 0 0 0 0.023552 2 17292 43.68 37.296 1 2.8106 2.3029 0 2497000 734900 1762100 24209 1714 9132 9343 37946;37947 37947 LTPVSPESSSTEEK 14 1 0 Unmodified _LTPVSPESSSTEEK_ 0 0 0 Q13501;B4E3V2;E7EMC7 Q13501 Q13501 SQSTM1 Sequestosome-1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 749.8713 2 745.864668 1489.71478 NaN NaN NaN -1.0917 -0.00081426 NaN NaN NaN NaN 38.45 0.71992 38.45 37.917 38.637 0 0 0 0 0.01774 1 16919 46.844 22.993 1 NaN NaN 0 1691200 0 1691200 24210 1714 9132 9343 37948 37948 LTPWEQFLEK 10 1 0 Unmodified _LTPWEQFLEK_ 0 0 0 Q9H501;A0JLU5;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.8406 2 645.840071 1289.66559 78389.17 0.83793 0.00054117 0.12731 8.2219E-05 0.96523 0.00062338 645.839814767871 649.847278881206 112.38 0.51178 112.38 112.12 112.63 0 83 35 4 0 0 0 0.0088105 1 70881 55.567 35.264 1 0.65002 0.65293 0 5170000 3078300 2091600 24211 2033 9133 9344 37949 37949 LTQDLFGTGGNTTGK 15 1 0 Unmodified _LTQDLFGTGGNTTGK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.391 2 755.38082 1508.74709 70199.08 0.50864 0.00038422 -0.20905 -0.00015791 0.29959 0.0002263 755.380433258826 759.388484502732 64.582 0.51305 64.582 64.299 64.812 0 155 47 4 0 0 0 0.00049803 1 37961 56.205 56.205 1 0.85728 0.88509 0 11468000 6235800 5232000 24212 135 9134 9345 37950 37950 LTQDLFGTGGNTTGK 15 1 0 Unmodified _LTQDLFGTGGNTTGK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 759.3889 2 755.38082 1508.74709 70389.33 0.68608 0.00051825 -0.1608 -0.00012146 0.52528 0.00039679 755.882155411824 759.388171700437 75.286 0.59441 75.286 74.953 75.547 0 163 43 5 0 0 0 0.00050188 2 40026 56.122 50.277 1 1.7895 1.4146 0 3047800 1046200 2001600 24213 135 9134 9345 37951;37952 37952 LTQDLFGTGGNTTGK 15 1 0 Unmodified _LTQDLFGTGGNTTGK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.3884 2 755.38082 1508.74709 NaN NaN NaN 0.31152 0.00023532 NaN NaN NaN NaN 75.641 0.60732 75.641 75.35 75.957 0 0 0 0 0.0033282 1 39473 60.628 51.196 1 NaN NaN 0 1751100 0 1751100 24214 135 9134 9345 37953 37953 LTQEETNFK 9 1 0 Unmodified _LTQEETNFK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.277 2 555.277303 1108.54005 80454.67 0.79288 0.00044027 -0.19236 -0.00010681 0.60052 0.00033346 555.277205568553 559.284344962085 28.099 0.79323 28.099 27.796 28.589 -1.9073E-06 273 54 8 0 0 0 1.0008E-18 2 13118 175.44 153.31 1 0.90131 1.0515 0 270410000 145690000 124720000 24215 2070 9135 9346 37954;37955 37955 LTQEETNFK 9 1 0 Unmodified _LTQEETNFK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.2775 2 555.277303 1108.54005 79629.62 0.24421 0.00013561 -0.24799 -0.0001377 -0.0037775 -2.0976E-06 555.277260698342 559.284244518627 27.532 0.77994 27.532 27.167 27.947 1.9073E-06 170 42 10 0 0 0 1.4611E-17 2 12779 170.24 154.86 1 0.8657 1.0187 0 383160000 201400000 181760000 24216 2070 9135 9346 37956;37957 37957 LTQEETNFK 9 1 0 Unmodified _LTQEETNFK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.2845 2 555.277303 1108.54005 80033.57 0.24056 0.00013358 0.084674 4.7017E-05 0.32523 0.0001806 555.277489632108 559.284424020742 32.005 0.8514 32.005 31.527 32.378 0 231 45 9 0 0 0 0.001489 2 13550 84.743 84.743 1 1.8243 1.5609 0 71115000 23738000 47378000 24217 2070 9135 9346 37958;37959 37958 LTQEETNFK 9 1 0 Unmodified _LTQEETNFK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.278 2 555.277303 1108.54005 80182.79 0.57078 0.00031694 -0.25387 -0.00014097 0.3169 0.00017597 555.277263116448 559.284190860946 32.171 0.69856 32.171 31.843 32.541 0 201 36 8 0 0 0 0.00085417 2 13180 93.429 87.647 1 1.789 1.5164 0 63787000 23612000 40174000 24218 2070 9135 9346 37960;37961 37961 LTQELQQAK 9 1 0 Unmodified _LTQELQQAK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.7952 2 529.795663 1057.57677 NaN NaN NaN -0.9825 -0.00052052 NaN NaN NaN NaN 24.422 0.24239 24.422 24.296 24.538 0 0 0 0 0.00014296 1 10157 96.253 48.404 1 NaN NaN 0 2232600 2232600 0 24219 1581 9136 9347 37962 37962 LTQELQQAK 9 1 0 Unmodified _LTQELQQAK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.83 2 529.795663 1057.57677 NaN NaN NaN -0.56729 -0.00030055 NaN NaN NaN NaN 24.152 0.22549 24.152 24.053 24.278 0 0 0 0 5.7462E-05 1 9923 103.74 55.89 1 NaN NaN 0 5202900 5202900 0 24220 1581 9136 9347 37963 37963 LTQEQVSDSQVLIR 14 0 1 Unmodified _LTQEQVSDSQVLIR_ 0 0 0 Q9P0I2;S4R3U9 Q9P0I2 Q9P0I2 EMC3 ER membrane protein complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 808.4366 2 808.436126 1614.8577 68941.15 0.90175 0.00072901 0.013213 1.0682E-05 0.91496 0.00073969 808.436276471407 813.439632953104 71.792 0.46061 71.792 71.529 71.99 7.6294E-06 130 39 5 0 0 0 0.00035359 1 41811 61.435 61.435 1 0.60868 0.63964 0 11591000 7377300 4213500 24221 2092 9137 9348 37964 37964 LTQEQVSDSQVLIR 14 0 1 Unmodified _LTQEQVSDSQVLIR_ 0 0 0 Q9P0I2;S4R3U9 Q9P0I2 Q9P0I2 EMC3 ER membrane protein complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.9378 2 808.436126 1614.8577 68774.07 0.6787 0.00054868 -0.50895 -0.00041146 0.16974 0.00013722 808.436004272001 813.438945772888 70.578 0.51289 70.578 70.345 70.858 -7.6294E-06 139 41 5 0 0 0 0.00016066 1 42115 74.962 55.355 1 0.56109 0.5594 0 16594000 10676000 5918100 24222 2092 9137 9348 37965 37965 LTQILSYLR 9 0 1 Unmodified _LTQILSYLR_ 0 0 0 Q9UK43;Q95HA6;B2R5Y4;Q13123;B4DEH2 Q9UK43 Q9UK43 CSA2;IK Protein Red MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.8369 2 553.832049 1105.64954 83706.73 0.71513 0.00039606 -0.17197 -9.5241E-05 0.54316 0.00030082 553.831901518667 558.836049085956 102.32 0.6505 102.32 102.01 102.66 0 148 52 4 0 0 0 0.00028282 1 62927 103.55 60.423 1 1.0133 1.038 0 10059000 5439300 4619600 24223 838 9138 9349 37966 37966 LTQILSYLR 9 0 1 Unmodified _LTQILSYLR_ 0 0 0 Q9UK43;Q95HA6;B2R5Y4;Q13123;B4DEH2 Q9UK43 Q9UK43 CSA2;IK Protein Red MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.8322 2 553.832049 1105.64954 83970.57 0.7362 0.00040773 -0.078142 -4.3278E-05 0.65806 0.00036445 553.831940182388 558.836102262118 101.45 0.67432 101.45 101.12 101.8 0 180 52 6 0 0 0 0.0018366 2 64012 80.219 50.72 1 0.87885 0.88693 0 10338000 4709200 5628900 24224 838 9138 9349 37967;37968 37968 LTQILSYLR 9 0 1 Unmodified _LTQILSYLR_ 0 0 0 Q9UK43;Q95HA6;B2R5Y4;Q13123;B4DEH2 Q9UK43 Q9UK43 CSA2;IK Protein Red MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.8333 2 553.832049 1105.64954 82020.68 0.67031 0.00037124 -0.0094733 -5.2466E-06 0.66084 0.00036599 553.832110190659 558.836355786308 114.69 0.3791 114.69 114.57 114.95 0 50 16 4 0 0 0 0.0019674 1 67037 78.516 52.622 1 0.61241 0.5163 0 3037400 1739000 1298400 24225 838 9138 9349 37969 37969 LTQILSYLR 9 0 1 Unmodified _LTQILSYLR_ 0 0 0 Q9UK43;Q95HA6;B2R5Y4;Q13123;B4DEH2 Q9UK43 Q9UK43 CSA2;IK Protein Red MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.8322 2 553.832049 1105.64954 84022.72 0.69154 0.000383 0.13266 7.3469E-05 0.8242 0.00045647 553.832138101802 558.836359515234 114.57 0.47844 114.57 114.33 114.81 0 65 20 6 0 0 0 0.014178 1 65964 55.908 38.351 1 0.69082 0.58889 0 3194500 1635700 1558800 24226 838 9138 9349 37970 37970 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.0129 3 705.678195 2114.01276 71976.78 0.4215 0.00029744 0.11287 7.9648E-05 0.53437 0.00037709 706.012577557636 711.021024025306 17.321 0.57163 17.321 17.143 17.714 1.9073E-06 113 19 10 0 0 0 1.5263E-141 2 4471 244.46 244.46 1 1.7929 2.116 0 91826000 34139000 57687000 24227 1569 9139 9350 37971;37972 37971 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1066.5322 2 1058.01365 2114.01276 59535.21 0.21255 0.00022488 0.26189 0.00027709 0.47444 0.00050197 1058.51540744986 1066.02788783161 17.358 0.29221 17.358 17.181 17.473 0 42 8 8 0 0 0 3.1529E-31 2 4488 179.81 179.81 1 1.6747 1.9527 0 11938000 4666900 7271100 24228 1569 9139 9350 37973;37974 37973 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.761 4 529.510465 2114.01276 82034.95 0.16784 8.8876E-05 0.16518 8.7465E-05 0.33303 0.00017634 529.760966536759 533.517527042795 17.295 0.43644 17.295 17.181 17.617 0 97 15 11 0 0 0 5.0216E-05 1 4502 38.453 38.453 1 2.0145 2.3779 0 75187000 24535000 50653000 24229 1569 9139 9350 37975 37975 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.0147 3 705.678195 2114.01276 71729.83 0.67225 0.00047439 0.18272 0.00012894 0.85497 0.00060333 706.012646548031 711.021181075066 17.183 0.56773 17.183 17.064 17.632 0 136 18 13 0 0 0 8.7524E-94 2 4174 201.67 201.67 1 1.6914 1.9651 0 118790000 41543000 77244000 24230 1569 9139 9350 37976;37977 37977 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.7623 4 529.510465 2114.01276 81910.52 0.48197 0.00025521 0.12591 6.6671E-05 0.60788 0.00032188 529.510677494593 533.517603033111 17.202 0.5149 17.202 17.064 17.579 0 107 16 12 0 0 0 1.6444E-06 1 4175 54.271 54.271 1 1.7285 2.0016 0 52254000 19297000 32957000 24231 1569 9139 9350 37978 37978 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1066.5327 2 1058.01365 2114.01276 59757.75 0.51168 0.00054137 0.3877 0.00041019 0.89938 0.00095156 1058.01372155537 1066.52986146377 17.256 0.36315 17.256 17.096 17.459 0 56 10 10 0 0 0 2.6208E-30 1 4181 172.91 172.91 1 1.6469 1.8835 0 16903000 6268000 10635000 24232 1569 9139 9350 37979 37979 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.5178 4 529.510465 2114.01276 81399.05 0.015577 8.2484E-06 0.22128 0.00011717 0.23686 0.00012542 529.761585672224 533.517917512155 18.556 0.44519 18.556 18.434 18.879 0 155 17 13 0 0 0 2.0781E-08 2 4532 86.8 86.8 1 3.2146 2.7209 0 81975000 19486000 62490000 24233 1569 9139 9350 37980;37981 37980 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.0132 3 705.678195 2114.01276 71024.94 0.28024 0.00019776 0.18826 0.00013285 0.4685 0.00033061 706.013055745727 711.021337215539 18.604 0.4699 18.604 18.434 18.904 0 193 18 16 0 0 0 1.7044E-18 2 4533 123.43 123.43 1 3.0269 2.5537 0 153490000 40472000 113020000 24234 1569 9139 9350 37982;37983 37982 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.0211 3 705.678195 2114.01276 71351.15 0.1244 8.7784E-05 0.11643 8.216E-05 0.24082 0.00016994 706.013069700145 711.021320009989 18.516 0.59085 18.516 18.327 18.918 0 258 32 14 0 0 0 5.1849E-32 2 4045 148.91 148.91 1 2.9939 2.5677 0 140140000 35398000 104740000 24235 1569 9139 9350 37984;37985 37985 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.7613 4 529.510465 2114.01276 80728.48 -0.0069854 -3.6988E-06 -0.021737 -1.151E-05 -0.028723 -1.5209E-05 529.761520774501 533.517756213446 18.52 0.4768 18.52 18.342 18.819 0 193 26 13 0 0 0 0.044935 1 4060 10.684 7.445 1 2.9971 2.5608 0 73020000 18672000 54348000 24236 1569 9139 9350 37986 37986 LTQTSGETTHTDKVPGGEDK 20 2 0 Unmodified _LTQTSGETTHTDKVPGGEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.6841 3 701.006312 2099.99711 71781.94 0.16882 0.00011834 0.24138 0.00016921 0.4102 0.00028755 701.340901538769 706.34930916002 20.158 0.44501 20.158 19.959 20.404 0 103 17 11 0 0 0 3.4413E-09 2 5618 68.49 68.49 1 3.3953 2.8994 0 14894000 3304300 11590000 24237 1569 9140 9351 37987;37988 37987 LTQTSGETTHTDKVPGGEDK 20 2 0 Unmodified _LTQTSGETTHTDKVPGGEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.014 4 526.006553 2099.99711 83271.73 -0.091325 -4.8037E-05 0.72591 0.00038184 0.63459 0.0003338 526.258067075282 530.014029740267 20.023 0.28124 20.023 19.9 20.181 0 55 9 11 0 0 0 4.3404E-05 1 5075 36.111 36.111 1 3.9277 3.3159 0 9487700 1953900 7533900 24238 1569 9140 9351 37989 37989 LTQTSGETTHTDKVPGGEDK 20 2 0 Unmodified _LTQTSGETTHTDKVPGGEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 701.3407 3 701.006312 2099.99711 71231.92 0.06921 4.8517E-05 0.86821 0.00060862 0.93742 0.00065714 701.34118019313 706.349719014753 20.033 0.47409 20.033 19.919 20.393 0 79 16 10 0 0 0 1.3824E-06 1 5077 62.966 62.966 1 3.0715 2.5981 0 13199000 2994900 10205000 24239 1569 9140 9351 37990 37990 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.329 3 699.994295 2096.96105 72405.27 0.1013 7.0913E-05 -0.11702 -8.1911E-05 -0.015712 -1.0998E-05 700.328708793852 702.665690726099 15.067 0.55105 15.067 14.975 15.526 0 113 25 13 0 0 0 3.9983E-125 2 2843 237.31 237.31 1 1.7509 2.0561 0 306630000 110340000 196290000 24240 1569 9141 9352 37991;37992 37991 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1049.9894 2 1049.4878 2096.96105 59096.35 -0.1864 -0.00019562 0.0096594 1.0137E-05 -0.17674 -0.00018548 1049.98935310923 1053.49501301149 15.102 0.27099 15.102 14.975 15.246 0 36 6 12 0 0 0 5.1527E-52 1 2877 201.3 188.94 1 1.6177 1.8337 0 93134000 34946000 58188000 24241 1569 9141 9352 37993 37993 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.9946 3 699.994295 2096.96105 70651.3 0.18787 0.00013151 0.02564 1.7948E-05 0.21351 0.00014946 700.328733491637 702.999914857384 15.12 0.67474 15.12 14.998 15.673 0 198 31 12 0 0 0 1.1117E-109 1 2751 224.19 224.19 1 1.7842 2.0821 0 267360000 97869000 169490000 24242 1569 9141 9352 37994 37994 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1053.4985 2 1049.4878 2096.96105 59258.22 0.0099697 1.0463E-05 0.12262 0.00012869 0.13259 0.00013916 1049.48836398368 1053.49479774768 15.12 0.28005 15.12 14.998 15.278 0 39 6 11 0 0 0 5.162E-141 2 2770 239.86 227.7 1 1.8392 2.0554 0 88083000 30645000 57438000 24243 1569 9141 9352 37995;37996 37995 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.251 4 525.24754 2096.96105 83326.54 -0.15359 -8.0672E-05 0.1249 6.5603E-05 -0.028688 -1.5069E-05 525.498476158002 527.251169158344 15.12 0.64128 15.12 14.851 15.493 0 67 25 12 0 0 0 0.00024173 1 2788 39.905 36.617 1 1.6746 1.9382 0 206320000 74927000 131390000 24244 1569 9141 9352 37997 37997 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.9998 3 699.994295 2096.96105 72816.32 0.49941 0.00034958 -0.20315 -0.0001422 0.29626 0.00020738 699.994857469398 702.665876676275 15.428 0.48121 15.428 15.345 15.826 0 131 25 12 0 0 0 3.0163E-124 2 2701 226.44 226.44 1 3.5085 3.0418 0 126310000 27691000 98615000 24245 1569 9141 9352 37998;37999 37998 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1049.9894 2 1049.4878 2096.96105 58604.02 0.14856 0.00015591 0.14737 0.00015467 0.29593 0.00031058 1049.48806707435 1053.4951031464 15.428 0.27019 15.428 15.361 15.631 0 37 7 11 0 0 0 8.615E-09 1 2732 92.773 80.412 1 3.7063 2.8987 0 16337000 3734300 12602000 24246 1569 9141 9352 38000 38000 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.6662 3 699.994295 2096.96105 72283.05 0.15639 0.00010947 -0.11443 -8.0101E-05 0.041959 2.9371E-05 700.329283920564 702.666297283331 15.525 0.52377 15.525 15.399 15.923 0 194 38 13 0 0 0 3.168E-66 2 2528 187.33 175.48 1 3.392 2.9244 0 189900000 43254000 146650000 24247 1569 9141 9352 38001;38002 38001 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1053.496 2 1049.4878 2096.96105 58920.99 -0.16516 -0.00017333 0.1299 0.00013633 -0.035257 -3.7002E-05 1049.48807110237 1053.9963270946 15.525 0.25477 15.525 15.41 15.665 0 53 9 11 0 0 0 4.9499E-65 2 2550 186.17 174.38 1 3.3187 2.6906 0 24443000 5732400 18710000 24248 1569 9141 9352 38003;38004 38003 LTQTSGQSTHTHKEPASGDEGIK 23 2 0 Unmodified _LTQTSGQSTHTHKEPASGDEGIK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.305 4 603.046475 2408.15679 78709.91 0.24727 0.00014911 0.17686 0.00010666 0.42413 0.00025577 603.047014165338 607.054102247919 17.284 0.25198 17.284 17.155 17.407 0 41 11 6 0 0 0 0.05846 1 3731 6.6491 3.1869 1 3.7494 3.2144 0 775820 166940 608890 24249 1569 9142 9353 38005 38005 LTQTSGQSTHTHKEPASGDEGIK 23 2 0 Unmodified _LTQTSGQSTHTHKEPASGDEGIK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.0535 4 603.046475 2408.15679 78299.32 0.12065 7.2758E-05 0.42122 0.00025401 0.54187 0.00032677 603.297307760821 607.053665711511 17.107 0.25765 17.107 16.957 17.215 0 84 20 7 0 0 0 0.0078396 1 3274 21.841 18.567 1 3.0172 2.6383 0 1496800 352010 1144800 24250 1569 9142 9353 38006 38006 LTQVLNTHYVAPR 13 0 1 Unmodified _LTQVLNTHYVAPR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.9501 3 504.615814 1510.82561 84212.13 0.2756 0.00013907 0.26978 0.00013613 0.54538 0.00027521 504.615854069029 507.95197028076 58.739 1.1325 58.739 58.303 59.436 0 426 91 8 0 0 0 4.5527E-05 2 33311 71.879 52.668 1 0.77033 0.87444 0 109370000 61137000 48236000 24251 695;1595 9143 9354 38007;38008 38008 LTQVLNTHYVAPR 13 0 1 Unmodified _LTQVLNTHYVAPR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.616 3 504.615814 1510.82561 84259.7 0.19141 9.6586E-05 -0.80897 -0.00040822 -0.61757 -0.00031163 504.615999240251 508.284702791247 57.295 1.1697 57.295 56.576 57.745 0 476 90 9 0 0 0 1.7257E-05 1 32911 88.075 68.831 1 1.2844 1.4636 0 102650000 43912000 58741000 24252 695;1595 9143 9354 38009 38009 LTQVLNTHYVAPR 13 0 1 Unmodified _LTQVLNTHYVAPR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.4193 2 756.420082 1510.82561 NaN NaN NaN 0.080548 6.0928E-05 NaN NaN NaN NaN 57.307 0.40305 57.307 57.04 57.443 0 0 0 0 1.2926E-05 1 33113 96.229 59.118 1 NaN NaN 0 4361600 4361600 0 24253 695;1595 9143 9354 38010 38010 LTQVLNTHYVAPR 13 0 1 Unmodified _LTQVLNTHYVAPR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.9519 3 504.615814 1510.82561 85675.21 0.30037 0.00015157 0.051787 2.6132E-05 0.35216 0.0001777 504.615853657324 507.951840279032 68.257 0.9986 68.257 67.849 68.848 0 317 71 8 0 0 0 4.7593E-05 2 35513 72.705 53.494 1 1.674 1.4289 0 8854700 3363200 5491600 24254 695;1595 9143 9354 38011;38012 38011 LTQVLNTHYVAPR 13 0 1 Unmodified _LTQVLNTHYVAPR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.616 3 504.615814 1510.82561 85458.79 0.24204 0.00012214 0.13764 6.9455E-05 0.37968 0.00019159 504.615916995507 507.951906397142 68.549 0.78439 68.549 68.243 69.028 0 261 54 8 0 0 0 2.3232E-05 2 34996 88.552 61.926 1 1.7287 1.4362 0 7647400 2538500 5108900 24255 695;1595 9143 9354 38013;38014 38014 LTSADALRPSVVSITGPLIR 20 0 2 Unmodified _LTSADALRPSVVSITGPLIR_ 0 0 1 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.7392 3 689.403789 2065.18954 73455.96 1.1883 0.00081921 -0.13923 -9.5988E-05 1.049 0.00072322 689.738142232325 696.075831290138 110.48 0.60749 110.48 110.27 110.88 -7.6294E-06 207 43 7 0 0 0 1.8764E-07 2 69414 83.776 83.776 1 1.9718 2.1425 0 39003000 14047000 24956000 24256 1205 9144 9355 38015;38016 38015 LTSADALRPSVVSITGPLIR 20 0 2 Unmodified _LTSADALRPSVVSITGPLIR_ 0 0 1 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.4048 3 689.403789 2065.18954 72653.34 0.81883 0.0005645 0.015387 1.0608E-05 0.83421 0.00057511 689.403813949741 696.075976872079 109.78 0.52477 109.78 109.51 110.04 0 187 34 8 0 0 0 2.3353E-10 1 70523 99.407 99.407 1 1.664 1.8887 0 34453000 12271000 22182000 24257 1205 9144 9355 38017 38017 LTSADALRPSVVSITGPLIR 20 0 2 Unmodified _LTSADALRPSVVSITGPLIR_ 0 0 1 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.3295 3 689.403789 2065.18954 73334.91 0.73082 0.00050383 0.49306 0.00033992 1.2239 0.00084375 689.404252214417 696.076205179088 121.11 0.31973 121.11 120.96 121.28 -7.6294E-06 77 14 8 0 0 0 0.0025559 1 72049 35.159 31.208 1 1.1584 1.0189 0 4264400 1939800 2324600 24258 1205 9144 9355 38018 38018 LTSDSTVYDYAGK 13 1 0 Unmodified _LTSDSTVYDYAGK_ 0 0 0 E5RJZ1;H0YBD2;Q6FGA0;O14548 E5RJZ1 E5RJZ1 COX7A2L Cytochrome c oxidase subunit 7A-related protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.3427 2 710.335546 1418.65654 NaN NaN NaN 0.81361 0.00057793 NaN NaN NaN NaN 50.385 0.14281 50.385 50.289 50.432 0 0 0 0 0.00024023 1 28450 88.596 53.085 1 NaN NaN 0 10630000 0 10630000 24259 1216 9145 9356 38019 38019 LTSEPEGDWFCPECEK 16 1 0 Unmodified _LTSEPEGDWFCPECEK_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q2HXV5;Q5JV90;Q5TH12;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 992.4111 2 992.408591 1982.80263 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.922 1 86.922 86.422 87.422 0 0 0 0 0.0055703 1 52428 51.286 45.563 1 24260 422;1317 9146 9357 38020 38020 LTSIIFAEDITTGQVLR 17 0 1 Unmodified _LTSIIFAEDITTGQVLR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 944.0281 2 939.022566 1876.03058 NaN NaN NaN -0.28558 -0.00026817 NaN NaN NaN NaN 122.05 0.12798 122.05 121.95 122.08 7.6294E-06 0 0 0 0.015199 1 80905 41.242 29.511 1 NaN NaN 0 1921200 0 1921200 24261 1937 9147 9358 38021 38021 LTSLDIPATYLTGDK 15 1 0 Unmodified _LTSLDIPATYLTGDK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.9308 2 804.429978 1606.8454 69071.37 0.62255 0.0005008 0.67318 0.00054153 1.2957 0.0010423 804.430509466207 808.4380496496 109.37 0.38679 109.37 109.2 109.59 7.6294E-06 105 25 6 0 0 0 2.4507E-05 1 70249 87.001 87.001 1 0.7528 0.75793 0 16120000 8854500 7265200 24262 873 9148 9359 38022 38022 LTSLDIPATYLTGDK 15 1 0 Unmodified _LTSLDIPATYLTGDK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 808.4374 2 804.429978 1606.8454 68153.23 0.71693 0.00057672 0.14223 0.00011442 0.85916 0.00069114 804.429220610344 808.437035640495 120.9 0.64693 120.9 120.55 121.19 0 96 29 7 0 0 0 0.0029039 2 70994 58.172 58.172 1 1.327 1.0487 0 3935800 1750800 2184900 24263 873 9148 9359 38023;38024 38024 LTSLNVK 7 1 0 Unmodified _LTSLNVK_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;K7EK45;A0A087WU68;Q59H49;A0A024R163;O95758 A6NLN1;A0A024R163 A6NLN1 PTBP1;ROD1;PTBP3 Polypyrimidine tract-binding protein 1;Polypyrimidine tract-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 387.74 2 387.739628 773.464704 98894.63 0.54499 0.00021131 -0.074146 -2.8749E-05 0.47084 0.00018256 387.73951436934 391.746634116102 34.498 0.6126 34.498 34.228 34.841 0 160 48 4 0 0 0 0.03096 2 17435 67.903 23.911 1 1.8274 1.9066 0 34158000 12872000 21285000 24264 592;71 9149 9360 38025;38026 38025 LTSLVPFVDAFQLER 15 0 1 Unmodified _LTSLVPFVDAFQLER_ 0 0 0 Q05BS0;Q6P1R0;Q3B770;Q7Z5T5;Q24JU4;J9R021;Q14152 Q05BS0 Q05BS0 EIF3A;eIF3a Eukaryotic translation initiation factor 3 subunit A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.9805 2 867.974887 1733.93522 NaN NaN NaN 0.45672 0.00039642 NaN NaN NaN NaN 132.95 0.70595 132.95 132.52 133.23 0 0 0 0 1.0381E-06 1 89188 93.258 75.449 1 NaN NaN 0 6170100 0 6170100 24265 1340 9150 9361 38027 38027 LTSSSIDPGLSIK 13 1 0 Unmodified _LTSSSIDPGLSIK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.3671 2 659.36665 1316.71875 74946.73 0.91135 0.00060091 0.049348 3.2538E-05 0.9607 0.00063345 659.36679646509 663.373568441738 79.695 1.15 79.695 79.07 80.22 0 396 101 8 0 0 0 1.158E-08 2 47216 113.47 113.47 1 0.9618 1.0884 0 150990000 80553000 70434000 24266 1813 9151 9362 38028;38029 38029 LTSSSIDPGLSIK 13 1 0 Unmodified _LTSSSIDPGLSIK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.3745 2 659.36665 1316.71875 74692.45 0.51105 0.00033697 -0.011418 -7.5287E-06 0.49964 0.00032944 659.3667141365 663.373563767348 78.621 0.99211 78.621 78.169 79.161 0 412 85 7 0 0 0 5.1797E-06 2 47594 106.16 90.419 1 1.0573 1.2336 0 265690000 132970000 132720000 24267 1813 9151 9362 38030;38031 38030 LTSSSIDPGLSIK 13 1 0 Unmodified _LTSSSIDPGLSIK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.3674 2 659.36665 1316.71875 74693.34 0.81225 0.00053557 -0.010559 -6.9625E-06 0.80169 0.00052861 659.366727121841 663.373644945497 91.371 1.1406 91.371 90.98 92.121 0 379 76 8 0 0 0 0.0014362 1 50725 57.836 57.836 1 1.5565 1.2814 0 40119000 16902000 23218000 24268 1813 9151 9362 38032 38032 LTSSSIDPGLSIK 13 1 0 Unmodified _LTSSSIDPGLSIK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.3739 2 659.36665 1316.71875 75163.3 0.55639 0.00036686 0.23754 0.00015663 0.79393 0.00052349 659.367106289341 663.373783054089 91.288 1.509 91.288 90.533 92.042 0 370 94 8 0 0 0 0.0041837 2 49703 48.741 48.741 1 1.5584 1.2985 0 40566000 16831000 23735000 24269 1813 9151 9362 38033;38034 38033 LTSSTSNSSLTADVNSGFAK 20 1 0 Unmodified _LTSSTSNSSLTADVNSGFAK_ 0 0 0 B2R6H3;Q8NI77 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 997.9908 2 993.984366 1985.95418 61937.81 0.21824 0.00021693 0.99035 0.00098439 1.2086 0.0012013 993.985912476634 997.991999107854 72.178 0.35796 72.178 72.006 72.363 0 71 27 4 0 0 0 5.2748E-06 2 42129 56.599 56.599 1 0.74207 0.73059 0 8609600 4666200 3943400 24270 842 9152 9363 38035;38036 38035 LTSSTSNSSLTADVNSGFAK 20 1 0 Unmodified _LTSSTSNSSLTADVNSGFAK_ 0 0 0 B2R6H3;Q8NI77 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 994.4888 2 993.984366 1985.95418 NaN NaN NaN 1.7748 0.0017641 NaN NaN NaN NaN 71.099 0.30708 71.099 70.957 71.264 0 0 0 0 5.4979E-12 1 42631 92.939 84.21 1 NaN NaN 0 5484700 5484700 0 24271 842 9152 9363 38037 38037 LTSSTSNSSLTADVNSGFAK 20 1 0 Unmodified _LTSSTSNSSLTADVNSGFAK_ 0 0 0 B2R6H3;Q8NI77 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 997.993 2 993.984366 1985.95418 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.965 1 70.965 70.465 71.465 0 0 0 0 0.0055034 1 42460 46.318 40.132 1 24272 842 9152 9363 38038 38038 LTSVTLEMESK 11 1 0 Oxidation (M) _LTSVTLEM(ox)ESK_ LTSVTLEM(1)ESK LTSVTLEM(46.41)ESK 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3252 2 627.318311 1252.62207 NaN NaN NaN -0.3532 -0.00022157 NaN NaN NaN NaN 45.23 0.40596 45.23 44.996 45.402 0 0 0 0 0.013319 1 24684 46.406 34.685 1 NaN NaN 0 6331300 0 6331300 24273 1581 9153 9364 38039 38039 1363 LTTASQTNIK 10 1 0 Unmodified _LTTASQTNIK_ 0 0 0 A0A024QZW2;Q9UMY1;H7C2B1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.8082 2 538.800946 1075.58734 82069.15 0.37138 0.0002001 0.21943 0.00011823 0.59081 0.00031833 538.801229142813 542.807829661142 23.359 0.31744 23.359 23.224 23.542 -1.9073E-06 45 14 4 0 0 0 0.0091454 1 9258 55.112 37.292 1 0.93354 0.9435 0 8625000 4446000 4179000 24274 30 9154 9365 38040 38040 LTTDFNVIVEALSK 14 1 0 Unmodified _LTTDFNVIVEALSK_ 0 0 0 B5BUB5;P05455;E9PGX9;E7ERC4;E9PFL9 B5BUB5 B5BUB5 SSB Lupus La protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.4306 2 775.427239 1548.83992 71205.67 0.43614 0.0003382 -0.84542 -0.00065556 -0.40928 -0.00031737 775.927449678737 779.434022705413 129.07 0.25975 129.07 128.9 129.16 -1.5259E-05 75 19 7 0 0 0 1.7255E-57 2 84141 196.38 177.85 1 1.5823 1.5719 0 26077000 11502000 14575000 24275 1077 9155 9366 38041;38042 38042 LTTDFNVIVEALSK 14 1 0 Unmodified _LTTDFNVIVEALSK_ 0 0 0 B5BUB5;P05455;E9PGX9;E7ERC4;E9PFL9 B5BUB5 B5BUB5 SSB Lupus La protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.4334 2 775.427239 1548.83992 70409.35 0.18225 0.00014132 -0.55639 -0.00043144 -0.37414 -0.00029012 775.927783232794 779.434077533682 128.66 0.25784 128.66 128.52 128.78 0 94 23 7 0 0 0 7.7464E-22 3 85944 149.23 131.39 1 1.2669 1.4048 0 47648000 23660000 23988000 24276 1077 9155 9366 38043;38044;38045 38045 LTTDPDLILEVLR 13 0 1 Unmodified _LTTDPDLILEVLR_ 0 0 0 Q71RC2;Q8TBL5;A0A087WTL9;Q6P4E2;Q96J85;F8W1I4;F8VY40 Q71RC2 Q71RC2 LARP4 La-related protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.4354 2 749.429781 1496.84501 NaN NaN NaN 0.066811 5.007E-05 NaN NaN NaN NaN 130.67 0.43427 130.67 130.47 130.9 0 0 0 0 0.022372 1 87272 46.706 30.815 1 NaN NaN 0 4584400 0 4584400 24277 1868 9156 9367 38046 38046 LTTEATQTPVSNK 13 1 0 Unmodified _LTTEATQTPVSNK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.3654 2 695.364638 1388.71472 71856.08 0.76428 0.00053145 0.081948 5.6984E-05 0.84623 0.00058844 695.364821586815 699.371748940055 28.89 0.22749 28.89 28.776 29.003 0 55 11 7 0 0 0 7.6783E-24 2 13812 158.94 125.68 1 0.42564 0.43147 0 27698000 19161000 8536400 24278 2014 9157 9368 38047;38048 38047 LTTEATQTPVSNK 13 1 0 Unmodified _LTTEATQTPVSNK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.3715 2 695.364638 1388.71472 NaN NaN NaN -1.2047 -0.00083774 NaN NaN NaN NaN 28.138 0.17767 28.138 28.025 28.203 0 0 0 0 1.2608E-20 1 13350 133.89 94.745 1 NaN NaN 0 9701100 0 9701100 24279 2014 9157 9368 38049 38049 LTTEATQTPVSNK 13 1 0 Unmodified _LTTEATQTPVSNK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.3642 2 695.364638 1388.71472 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.129 1 28.129 27.629 28.629 -1.9073E-06 0 0 0 8.9593E-136 1 13329 252.14 171.98 1 24280 2014 9157 9368 38050 38050 LTTEATQTPVSNK 13 1 0 Unmodified _LTTEATQTPVSNK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.3721 2 695.364638 1388.71472 72659.91 0.22507 0.0001565 0.46293 0.0003219 0.688 0.00047841 695.36502202344 699.371926878791 32.794 0.28038 32.794 32.616 32.896 0 96 13 9 0 0 0 1.3087E-18 2 14223 139.31 109.05 1 0.5628 0.44637 0 10241000 6698300 3543200 24281 2014 9157 9368 38051;38052 38051 LTTEATQTPVSNK 13 1 0 Unmodified _LTTEATQTPVSNK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 695.3649 2 695.364638 1388.71472 72637.14 0.44471 0.00030924 0.18042 0.00012546 0.62514 0.0004347 695.364690017941 699.371797323957 32.834 0.24614 32.834 32.715 32.961 0 54 9 10 0 0 0 1.5897E-05 2 13796 99.568 71.169 1 0.59802 0.49116 0 9437300 6096900 3340400 24282 2014 9157 9368 38053;38054 38053 LTTLELLEVR 10 0 1 Unmodified _LTTLELLEVR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.8568 2 593.855721 1185.69689 81028.11 1.0521 0.00062477 0.92833 0.00055129 1.9804 0.0011761 593.85587656152 598.860161980173 110.29 0.55815 110.29 110 110.56 0 143 39 6 0 0 0 0.00013082 1 69153 96.331 96.331 1 1.6655 1.7037 0 35128000 15224000 19904000 24283 415 9158 9369 38055 38055 LTTLELLEVR 10 0 1 Unmodified _LTTLELLEVR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.8602 2 593.855721 1185.69689 82751.48 0.74983 0.00044529 0.34093 0.00020247 1.0908 0.00064776 593.855646665664 598.859758703734 109.63 0.55865 109.63 109.34 109.89 0 125 37 5 0 0 0 2.7898E-09 1 70428 126.07 126.07 1 1.5388 1.543 0 17843000 6349100 11494000 24284 415 9158 9369 38056 38056 LTTLPSDFCGLTHLVK 16 1 0 Unmodified _LTTLPSDFCGLTHLVK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.6566 3 601.322078 1800.94441 76556.43 0.6833 0.00041088 0.019112 1.1492E-05 0.70241 0.00042237 601.656486988417 603.993592061664 120.85 0.58779 120.85 120.66 121.25 0 198 28 13 0 0 0 0.020671 1 71763 14.88 14.88 1 0.72715 0.60691 0 49146000 28271000 20875000 24285 1958 9159 9370 38057 38057 LTTPPVNTR 9 0 1 Unmodified _LTTPPVNTR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.7899 2 499.785099 997.555644 86247.22 0.49535 0.00024757 -0.24817 -0.00012403 0.24718 0.00012354 499.785314773104 504.789451138364 36.21 0.41334 36.21 35.938 36.352 0 133 39 5 0 0 0 0.0018198 2 18256 80.438 56.483 1 1.7331 1.7596 0 27830000 9856700 17973000 24286 1205 9160 9371 38058;38059 38058 LTTPTYGDLNHLVS 14 0 0 Unmodified _LTTPTYGDLNHLVS_ 0 0 0 M0R042;M0QYM7 M0R042 M0R042 TUBB4A MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.8928 2 765.893563 1529.77257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.657 1 98.657 98.157 99.157 0 0 0 0 0.01278 1 61749 49.3 18.737 1 24287 1353 9161 9372 38060 38060 LTTPTYGDLNHLVSATMSGVTTCLR 25 0 1 Oxidation (M) _LTTPTYGDLNHLVSATM(ox)SGVTTCLR_ LTTPTYGDLNHLVSATM(1)SGVTTCLR LTTPTYGDLNHLVSATM(80.06)SGVTTCLR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8IWP6;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A1L196;P04350;B4DE77 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 909.1164 3 908.78256 2723.32585 63143.82 0.62122 0.00056455 -0.4947 -0.00044958 0.12652 0.00011498 909.115618434151 912.452736024115 111.19 0.54837 111.19 110.85 111.4 0 333 37 12 0 0 0 1.597E-13 3 69848 80.061 80.061 1 2.3978 2.7694 0 158320000 47569000 110750000 24288 1452;1660;1723;1441 9162 9373 38061;38062;38063 38063 1143 LTTPTYGDLNHLVSATMSGVTTCLR 25 0 1 Oxidation (M) _LTTPTYGDLNHLVSATM(ox)SGVTTCLR_ LTTPTYGDLNHLVSATM(1)SGVTTCLR LTTPTYGDLNHLVSATM(51.4)SGVTTCLR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8IWP6;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A1L196;P04350;B4DE77 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.4564 3 908.78256 2723.32585 63170.43 0.94954 0.00086293 -0.49356 -0.00044853 0.45598 0.00041439 909.116005870239 912.453117993644 111.69 0.56803 111.69 111.4 111.97 -7.6294E-06 339 41 12 0 0 0 2.1232E-09 1 70438 51.398 44.682 1 2.5849 2.9503 0 122070000 36320000 85748000 24289 1452;1660;1723;1441 9162 9373 38064 38064 1143 LTTPTYGDLNHLVSATMSGVTTCLR 25 0 1 Oxidation (M) _LTTPTYGDLNHLVSATM(ox)SGVTTCLR_ LTTPTYGDLNHLVSATM(1)SGVTTCLR LTTPTYGDLNHLVSATM(93.97)SGVTTCLR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8IWP6;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A1L196;P04350;B4DE77 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 912.4537 3 908.78256 2723.32585 62826.9 0.67219 0.00061088 -0.38582 -0.00035063 0.28637 0.00026025 909.450889952658 912.452773469601 110.58 0.61901 110.58 110.28 110.9 0 366 46 12 0 0 0 1.4404E-16 2 71071 93.966 83.986 1 2.1899 2.5201 0 210510000 62121000 148390000 24290 1452;1660;1723;1441 9162 9373 38065;38066 38065 1143 LTTPTYGDLNHLVSATMSGVTTCLR 25 0 1 Oxidation (M) _LTTPTYGDLNHLVSATM(ox)SGVTTCLR_ LTTPTYGDLNHLVSATM(1)SGVTTCLR LTTPTYGDLNHLVSATM(66.52)SGVTTCLR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8IWP6;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A1L196;P04350;B4DE77 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 912.4528 3 908.78256 2723.32585 63224 0.65557 0.00059577 -0.53783 -0.00048877 0.11773 0.00010699 909.115987867561 912.453007521767 111.1 0.52807 111.1 110.81 111.34 0 285 39 13 0 0 0 2.4812E-12 1 71689 66.52 59.408 1 2.401 2.7307 0 118640000 31742000 86899000 24291 1452;1660;1723;1441 9162 9373 38067 38067 1143 LTTPTYGDLNHLVSATMSGVTTCLR 25 0 1 Oxidation (M) _LTTPTYGDLNHLVSATM(ox)SGVTTCLR_ LTTPTYGDLNHLVSATM(1)SGVTTCLR LTTPTYGDLNHLVSATM(47.81)SGVTTCLR 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8IWP6;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A1L196;P04350;B4DE77 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 909.1176 3 908.78256 2723.32585 64003.68 0.66843 0.00060746 -0.92136 -0.00083732 -0.25294 -0.00022986 909.115809307741 912.453227442435 122.06 0.33844 122.06 121.89 122.23 7.6294E-06 106 15 10 0 0 0 7.7833E-07 2 72715 47.806 47.806 1 0.60227 0.511 0 32892000 17588000 15305000 24292 1452;1660;1723;1441 9162 9373 38068;38069 38069 1143 LTTPTYGDLNHLVSATMSGVTTCLR 25 0 1 Unmodified _LTTPTYGDLNHLVSATMSGVTTCLR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8IWP6;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A1L196;P04350;B4DE77 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.9947 3 903.450922 2707.33094 65563.71 0.84478 0.00076321 -0.15462 -0.00013969 0.69016 0.00062353 903.785104355517 907.455880135421 124.82 0.6119 124.82 124.51 125.12 0 115 41 8 0 0 0 0.017099 1 81063 19.25 19.25 1 1.009 1.0341 0 19214000 12048000 7165900 24293 1452;1660;1723;1441 9162 9374 38070 38070 LTTPTYGDLNHLVSATMSGVTTCLR 25 0 1 Unmodified _LTTPTYGDLNHLVSATMSGVTTCLR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8IWP6;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A1L196;P04350;B4DE77 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.784 3 903.450922 2707.33094 65072.75 0.90475 0.0008174 0.10572 9.5509E-05 1.0105 0.00091291 903.451189408685 907.121442651269 124.29 0.60654 124.29 123.96 124.57 0 176 39 9 0 0 0 2.9698E-09 4 82641 49.765 49.765 1 1.1532 1.2253 0 24130000 13464000 10666000 24294 1452;1660;1723;1441 9162 9374 38071;38072;38073;38074 38073 LTTPTYGDLNHLVSATMSGVTTCLR 25 0 1 Unmodified _LTTPTYGDLNHLVSATMSGVTTCLR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;Q8IZ29;P68371;Q8IWP6;M0R2D3;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A5D907;A5D906;A1L195;A1L196;P04350;B4DE77 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 907.1218 3 903.450922 2707.33094 61895.38 0.83012 0.00074997 0.31094 0.00028092 1.1411 0.0010309 903.785612684369 907.121455692043 134.47 0.33131 134.47 134.33 134.66 0 53 12 11 0 0 0 1.8882E-21 1 82119 108.64 108.64 1 1.2044 1.034 0 42948000 21681000 21267000 24295 1452;1660;1723;1441 9162 9374 38075 38075 LTTTGQVTSPVK 12 1 0 Unmodified _LTTTGQVTSPVK_ 0 0 0 P49916;K7ERZ5;K7ENR9;Q96DF0 P49916 P49916 LIG3 DNA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.3484 2 616.34826 1230.68197 78328.55 0.49566 0.0003055 0.19784 0.00012194 0.6935 0.00042744 616.348354431639 620.355352691316 41.818 0.39152 41.818 41.674 42.065 0 90 29 5 0 0 0 0.0008083 1 22160 65.5 65.5 1 0.72748 0.72026 0 9461900 5680400 3781500 24296 1589 9163 9375 38076 38076 LTVADALEPVQFEDGQK 17 1 0 Unmodified _LTVADALEPVQFEDGQK_ 0 0 0 K7EM13;Q68DQ4;B2R5T5;P10644;K7EPB2 K7EM13 K7EM13 PRKAR1A;DKFZp779L0468 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 930.4733 2 930.472906 1858.93126 62568.68 0.61131 0.00056881 -1.0264 -0.00095506 -0.41511 -0.00038625 930.974152215256 935.481721789812 108.25 0.42551 108.25 108.06 108.48 0 102 29 5 0 0 0 3.8042E-07 2 69214 96.64 96.64 1 1.8817 1.8825 0 14017000 4882100 9134600 24297 835 9164 9376 38077;38078 38078 LTVADIR 7 0 1 Unmodified _LTVADIR_ 0 0 0 Q2VF42;Q2Q9H2;Q2Q9B7;A8K8D9;P11413;Q0PHS1;E7EUI8;B4DYA7;E9PD92;E7EM57;I3V9R4;Q0PHS3;Q0PHS2 Q2VF42 Q2VF42 G6PD Glucose-6-phosphate 1-dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.2415 2 394.237253 786.459953 96074.67 -0.22155 -8.7343E-05 1.84 0.00072539 1.6184 0.00063805 394.237546522608 399.241481932166 53.061 0.46141 53.061 52.842 53.303 0 103 35 5 0 0 0 0.037624 1 29678 60.76 16.068 1 1.3284 1.3726 0 23695000 10726000 12969000 24298 775 9165 9377 38079 38079 LTVADIR 7 0 1 Unmodified _LTVADIR_ 0 0 0 Q2VF42;Q2Q9H2;Q2Q9B7;A8K8D9;P11413;Q0PHS1;E7EUI8;B4DYA7;E9PD92;E7EM57;I3V9R4;Q0PHS3;Q0PHS2 Q2VF42 Q2VF42 G6PD Glucose-6-phosphate 1-dehydrogenase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 394.2371 2 394.237253 786.459953 NaN NaN NaN 1.5694 0.0006187 NaN NaN NaN NaN 51.733 0.35461 51.733 51.61 51.964 0 0 0 0 0.052116 1 29389 57.281 14.806 1 NaN NaN 0 14167000 14167000 0 24299 775 9165 9377 38080 38080 LTVAENEAETK 11 1 0 Unmodified _LTVAENEAETK_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.8114 2 602.806425 1203.5983 78906.1 0.48868 0.00029458 0.16574 9.991E-05 0.65442 0.00039449 602.806362977174 606.813420755182 28.464 0.44129 28.464 28.278 28.719 -1.9073E-06 126 28 7 0 0 0 8.5874E-11 1 13380 136.63 98.549 1 2.9894 3.222 0 41241000 10699000 30542000 24300 1454 9166 9378 38081 38081 LTVAENEAETK 11 1 0 Unmodified _LTVAENEAETK_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.8135 2 602.806425 1203.5983 78225.23 0.50726 0.00030578 0.3429 0.0002067 0.85015 0.00051248 602.806233237672 606.813643101563 27.861 0.44135 27.861 27.688 28.13 0 89 25 7 0 0 0 1.13E-13 1 13050 150.08 91.095 1 2.5983 2.9192 0 74175000 21356000 52819000 24301 1454 9166 9378 38082 38082 LTVAENEAETK 11 1 0 Unmodified _LTVAENEAETK_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8066 2 602.806425 1203.5983 77269.52 0.2938 0.0001771 -0.49836 -0.00030041 -0.20456 -0.00012331 602.806120972076 606.812935392166 32.412 0.41316 32.412 32.248 32.661 0 78 18 7 0 0 0 0.0019892 2 13949 63.283 30.815 1 1.1535 0.91047 0 5356600 2562700 2793900 24302 1454 9166 9378 38083;38084 38084 LTVAENEAETK 11 1 0 Unmodified _LTVAENEAETK_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 606.8146 2 602.806425 1203.5983 77259.7 0.53111 0.00032016 -0.23228 -0.00014002 0.29883 0.00018014 602.806434680732 606.813533258707 32.611 0.34758 32.611 32.44 32.787 0 95 16 8 0 0 0 0.00045221 2 13583 77.379 39.293 1 1.2381 1.01 0 5958900 2808100 3150800 24303 1454 9166 9378 38085;38086 38085 LTVDEAVR 8 0 1 Unmodified _LTVDEAVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.7506 2 451.750724 901.486896 89503.32 0.34938 0.00015783 0.12254 5.5357E-05 0.47192 0.00021319 451.750719882771 456.754786981057 42.032 0.53352 42.032 41.818 42.352 0 192 39 7 0 0 0 0.0085421 2 22206 78.178 32.007 1 1.6591 1.9611 0 255900000 85260000 170650000 24304 1754 9167 9379 38087;38088 38088 LTVDEAVR 8 0 1 Unmodified _LTVDEAVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.7552 2 451.750724 901.486896 90646.96 0.24786 0.00011197 -0.35804 -0.00016175 -0.11018 -4.9776E-05 451.750569618851 456.754476417632 40.722 0.77703 40.722 40.556 41.333 0 230 60 6 0 0 0 0.0062953 2 21824 87.754 26.994 1 1.8071 2.0649 0 152040000 51121000 100920000 24305 1754 9167 9379 38089;38090 38090 LTVDEAVR 8 0 1 Unmodified _LTVDEAVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 456.7548 2 451.750724 901.486896 NaN NaN NaN -0.3368 -0.00015215 NaN NaN NaN NaN 48.026 0.87694 48.026 47.654 48.531 3.8147E-06 0 0 0 0.039261 1 23335 54.157 22.868 1 NaN NaN 0 2715800 0 2715800 24306 1754 9167 9379 38091 38091 LTVDSAIAR 9 0 1 Unmodified _LTVDSAIAR_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2735 2 473.271824 944.529095 NaN NaN NaN 0.24892 0.00011781 NaN NaN NaN NaN 51.61 0.39338 51.61 51.413 51.806 0 0 0 0 0.047388 1 28532 47.869 11.989 1 NaN NaN 0 14043000 14043000 0 24307 1486 9168 9380 38092 38092 LTVEDLEK 8 1 0 Unmodified _LTVEDLEK_ 0 0 0 B4DM33;Q15691 B4DM33 B4DM33 MAPRE1 Microtubule-associated protein RP/EB family member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.7666 2 473.758215 945.501877 NaN NaN NaN 0.30136 0.00014277 NaN NaN NaN NaN 59.719 0.32624 59.719 59.556 59.882 -3.8147E-06 0 0 0 0.018303 1 34731 66.429 30.549 1 NaN NaN 0 7305700 0 7305700 24308 1001 9169 9381 38093 38093 LTVEDPVTVEYITR 14 0 1 Unmodified _LTVEDPVTVEYITR_ 0 0 0 Q05DH1;A0A0K0K1K4;O14818;H0Y586;B0YJ74;A0A087WYS6;Q8TAA3;H0UI83;Q4G1B8 Q05DH1 Q05DH1 PSMA7;PSMA8;hCG_41772 Proteasome subunit alpha type;Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.943 2 817.935428 1633.8563 NaN NaN NaN -0.014879 -1.217E-05 NaN NaN NaN NaN 103.38 0.51032 103.38 103.07 103.58 0 0 0 0 0.0039168 1 63606 60.49 44.352 1 NaN NaN 0 7308200 0 7308200 24309 539 9170 9382 38094 38094 LTVEDPVTVEYITR 14 0 1 Unmodified _LTVEDPVTVEYITR_ 0 0 0 Q05DH1;A0A0K0K1K4;O14818;H0Y586;B0YJ74;A0A087WYS6;Q8TAA3;H0UI83;Q4G1B8 Q05DH1 Q05DH1 PSMA7;PSMA8;hCG_41772 Proteasome subunit alpha type;Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.9403 2 817.935428 1633.8563 NaN NaN NaN -0.14642 -0.00011976 NaN NaN NaN NaN 102.72 0.46588 102.72 102.45 102.92 0 0 0 0 0.0015088 1 64733 70.488 55.345 1 NaN NaN 0 14588000 0 14588000 24310 539 9170 9382 38095 38095 LTVEEAVR 8 0 1 Unmodified _LTVEEAVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.7583 2 458.758549 915.502546 88171.53 0.55089 0.00025273 -0.32854 -0.00015072 0.22235 0.000102 458.758540586317 463.762228002877 44.697 0.72543 44.697 44.291 45.016 0 270 64 6 0 0 0 0.023961 1 23875 56.177 36.255 1 1.6634 1.8444 0 66183000 24493000 41689000 24311 1754 9171 9383 38096 38096 LTVEEAVR 8 0 1 Unmodified _LTVEEAVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.7585 2 458.758549 915.502546 88658.23 1.03 0.00047254 -0.28227 -0.0001295 0.74777 0.00034305 458.758480179841 463.762380272864 43.954 0.74728 43.954 43.481 44.228 0 236 62 6 0 0 0 0.02421 2 23870 56.014 25.789 1 1.9045 2.1696 0 105130000 38136000 66999000 24312 1754 9171 9383 38097;38098 38098 LTVEEAVR 8 0 1 Unmodified _LTVEEAVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 463.7623 2 458.758549 915.502546 89765.2 0.00053922 2.4737E-07 0.010826 4.9667E-06 0.011366 5.214E-06 458.758526794511 463.762595699873 51.655 0.65788 51.655 51.288 51.946 0 163 51 5 0 0 0 0.013465 1 25456 65.252 35.067 1 2.2904 1.9468 0 5294200 1476300 3817900 24313 1754 9171 9383 38099 38099 LTVEEAVR 8 0 1 Unmodified _LTVEEAVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 463.7623 2 458.758549 915.502546 92187.3 -0.10964 -5.0297E-05 0.029002 1.3305E-05 -0.080636 -3.6993E-05 458.758607132854 463.762595836103 51.952 0.63994 51.952 51.632 52.272 0 169 47 6 0 0 0 0.013109 2 25017 66.073 40.179 1 2.3627 2.0897 0 4061300 1213100 2848300 24314 1754 9171 9383 38100;38101 38100 LTVEFMHYIIAAR 13 0 1 Unmodified _LTVEFMHYIIAAR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;H7BYY8 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.2844 3 521.949916 1562.82792 82357.8 0.49356 0.00025761 0.73091 0.0003815 1.2245 0.00063911 521.950031014148 525.286066346944 123.92 0.49672 123.92 123.63 124.12 7.6294E-06 81 20 8 0 0 0 0.025285 1 74141 23.711 23.711 1 1.1269 0.94181 0 3449900 1642000 1807900 24315 886 9172 9384 38102 38102 LTVNEAVK 8 1 0 Unmodified _LTVNEAVK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2627 2 437.255643 872.496732 92844.55 0.12896 5.6389E-05 0.066141 2.8921E-05 0.1951 8.531E-05 437.25568364802 441.262742488034 33.803 0.62062 33.803 33.497 34.117 0 176 48 5 0 0 0 0.0087497 2 17100 77.282 37.179 1 1.9833 2.2024 0 49479000 17034000 32446000 24316 1754 9173 9385 38103;38104 38104 LTVQEEQIVELIEK 14 1 0 Unmodified _LTVQEEQIVELIEK_ 0 0 0 P52732 P52732 P52732 KIF11 Kinesin-like protein KIF11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 839.9717 2 835.964185 1669.91382 NaN NaN NaN -0.2369 -0.00019804 NaN NaN NaN NaN 118.97 0.53471 118.97 118.7 119.24 -7.6294E-06 0 0 0 5.4586E-15 1 76363 122.7 108.28 1 NaN NaN 0 21275000 0 21275000 24317 1602 9174 9386 38105 38105 LTVQEEQIVELIEK 14 1 0 Unmodified _LTVQEEQIVELIEK_ 0 0 0 P52732 P52732 P52732 KIF11 Kinesin-like protein KIF11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.9718 2 835.964185 1669.91382 NaN NaN NaN -0.056924 -4.7586E-05 NaN NaN NaN NaN 118.44 0.49298 118.44 118.24 118.74 -7.6294E-06 0 0 0 2.3119E-10 1 77861 116.71 105.26 1 NaN NaN 0 10423000 0 10423000 24318 1602 9174 9386 38106 38106 LTVSSLQESGLK 12 1 0 Unmodified _LTVSSLQESGLK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4DTD5 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.3536 2 631.353542 1260.69253 78551.34 0.69122 0.00043641 0.036626 2.3124E-05 0.72785 0.00045953 631.353500185853 635.360758662105 70.53 0.57675 70.53 70.305 70.882 0 123 46 5 0 0 0 0.032304 1 41025 35.541 18.516 1 1.1894 1.2356 0 14849000 6012700 8836000 24319 1504 9175 9387 38107 38107 LTVSSLQESGLK 12 1 0 Unmodified _LTVSSLQESGLK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4DTD5 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.3616 2 631.353542 1260.69253 NaN NaN NaN -0.51929 -0.00032786 NaN NaN NaN NaN 81.53 0.64732 81.53 81.165 81.812 0 0 0 0 0.0068733 1 43247 59.542 32.571 1 NaN NaN 0 1211400 0 1211400 24320 1504 9175 9387 38108 38108 LTWHAYPEDAENK 13 1 0 Unmodified _LTWHAYPEDAENK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.2534 3 525.247567 1572.72087 84359.55 0.19698 0.00010346 -0.050456 -2.6502E-05 0.14652 7.696E-05 525.247416273978 527.9189308796 50.469 0.945 50.469 50.037 50.982 0 453 90 8 0 0 0 8.1292E-05 2 27784 54.09 54.09 1 0.55856 0.6305 0 135930000 78593000 57338000 24321 1568 9176 9388 38109;38110 38109 LTWHAYPEDAENK 13 1 0 Unmodified _LTWHAYPEDAENK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.8696 2 787.367712 1572.72087 NaN NaN NaN -0.019298 -1.5195E-05 NaN NaN NaN NaN 50.488 0.46503 50.488 50.256 50.721 0 0 0 0 0.00035285 2 27779 86.344 76.114 1 NaN NaN 0 22130000 22130000 0 24322 1568 9176 9388 38111;38112 38111 LTWHAYPEDAENK 13 1 0 Unmodified _LTWHAYPEDAENK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.3748 2 787.367712 1572.72087 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.406 1 50.406 49.906 50.906 0 0 0 0 2.3365E-59 1 27821 189.57 164.74 1 24323 1568 9176 9388 38113 38113 LTWHAYPEDAENK 13 1 0 Unmodified _LTWHAYPEDAENK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.9191 3 525.247567 1572.72087 83100.16 0.3435 0.00018042 0.365 0.00019172 0.7085 0.00037214 525.247611145281 527.9191419716 48.83 0.70234 48.83 48.443 49.145 0 325 55 9 0 0 0 0.00011139 2 27256 60.364 55.473 1 0.62347 0.7138 0 162310000 103660000 58649000 24324 1568 9176 9388 38114;38115 38115 LTWHAYPEDAENK 13 1 0 Unmodified _LTWHAYPEDAENK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.3682 2 787.367712 1572.72087 69216.55 0.62217 0.00048988 0.32957 0.00025949 0.95174 0.00074937 787.869287379452 791.374769896582 48.819 0.43477 48.819 48.568 49.003 0 117 34 6 0 0 0 0.00014499 2 27321 83.182 83.182 1 0.61778 0.67751 0 41053000 23781000 17273000 24325 1568 9176 9388 38116;38117 38116 LTWHAYPEDAENK 13 1 0 Unmodified _LTWHAYPEDAENK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.3754 2 787.367712 1572.72087 68977.34 0.65018 0.00051193 0.22414 0.00017648 0.87432 0.00068841 787.36758864439 791.374713232388 57.85 0.64533 57.85 57.611 58.257 0 263 49 7 0 0 0 0.016446 2 29294 36.528 36.528 1 1.0118 0.81285 0 7878100 4276500 3601600 24326 1568 9176 9388 38118;38119 38119 LTWHAYPEDAENK 13 1 0 Unmodified _LTWHAYPEDAENK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.9187 3 525.247567 1572.72087 82566.11 0.34556 0.00018151 0.16508 8.6707E-05 0.51064 0.00026821 525.247590392759 527.918939638989 57.86 1.0394 57.86 57.54 58.58 -3.8147E-06 477 78 9 0 0 0 0.00025922 2 29392 47.774 47.774 1 0.95972 0.7779 0 25004000 12522000 12482000 24327 1568 9176 9388 38120;38121 38121 LTWHAYPEDAENK 13 1 0 Unmodified _LTWHAYPEDAENK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.869 2 787.367712 1572.72087 68540.13 0.60973 0.00048008 -0.1095 -8.6215E-05 0.50023 0.00039387 787.367540286922 791.374582724309 58.295 0.68511 58.295 57.971 58.656 0 252 50 7 0 0 0 0.032449 1 28848 33.057 33.057 1 0.93207 0.7605 0 6145200 3321600 2823600 24328 1568 9176 9388 38122 38122 LTWHAYPEDAENK 13 1 0 Unmodified _LTWHAYPEDAENK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.9188 3 525.247567 1572.72087 83175.47 0.31627 0.00016612 -0.071987 -3.7811E-05 0.24428 0.00012831 525.247529820486 527.918835380296 58.268 0.87732 58.268 57.915 58.792 -3.8147E-06 437 65 9 0 0 0 0.00078959 2 28879 47.621 47.621 1 0.99113 0.79483 0 19032000 9830700 9201200 24329 1568 9176 9388 38123;38124 38123 LTWHSCPEDEAQ 12 0 0 Unmodified _LTWHSCPEDEAQ_ 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.8099 2 736.809173 1471.60379 NaN NaN NaN -0.16303 -0.00012012 NaN NaN NaN NaN 46.419 0.86366 46.419 46.055 46.919 0 0 0 0 4.0838E-08 1 24881 106.6 103.87 1 24330 662 9177 9389 38125 38125 LTWHSCPEDEAQ 12 0 0 Unmodified _LTWHSCPEDEAQ_ 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.8102 2 736.809173 1471.60379 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.884 1 46.884 46.384 47.384 0 0 0 0 0.0087683 1 25382 58.433 50.213 1 24331 662 9177 9389 38126 38126 LTWHSCPEDEAQ 12 0 0 Unmodified _LTWHSCPEDEAQ_ 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.311 2 736.809173 1471.60379 NaN NaN NaN -0.15885 -0.00011704 NaN NaN NaN NaN 45.249 0.84066 45.249 44.923 45.764 0 0 0 0 0.0007376 1 24658 85.731 79.041 1 24332 662 9177 9389 38127 38127 LTWHSCPEDEAQ 12 0 0 Unmodified _LTWHSCPEDEAQ_ 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.8095 2 736.809173 1471.60379 NaN NaN NaN -0.35267 -0.00025985 NaN NaN NaN NaN 53.692 1.7091 53.692 53.388 55.097 0 0 0 0 4.5658E-05 2 26569 95.502 94.975 1 24333 662 9177 9389 38128;38129 38128 LTWHSCPEDEAQ 12 0 0 Unmodified _LTWHSCPEDEAQ_ 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.3112 2 736.809173 1471.60379 NaN NaN NaN -0.20515 -0.00015116 NaN NaN NaN NaN 54.277 1.4902 54.277 53.868 55.358 3.8147E-06 0 0 0 0.00074323 2 26273 85.67 84.555 1 24334 662 9177 9389 38130;38131 38130 LTYEIEDEK 9 1 0 Unmodified _LTYEIEDEK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.2771 2 570.276969 1138.53938 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.417 1 49.417 48.917 49.917 0 0 0 0 0.0010366 1 27138 96.948 69.818 1 24335 1486 9178 9390 38132 38132 LTYLLQNSLGGSAK 14 1 0 Unmodified _LTYLLQNSLGGSAK_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063;A0A087X1W5 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.4152 2 732.906473 1463.79839 NaN NaN NaN -0.26128 -0.00019149 NaN NaN NaN NaN 100.04 0.23592 100.04 99.871 100.11 0 0 0 0 0.043177 1 55723 39.702 28.17 1 NaN NaN 0 956500 0 956500 24336 371 9179 9391 38133 38133 LTYTMILNLLR 11 0 1 Oxidation (M) _LTYTM(ox)ILNLLR_ LTYTM(1)ILNLLR LTYTM(57.6)ILNLLR 0 1 0 B4DSY1;Q9NPK3;Q96BC0;O76046;Q15477;A0A024RCU1;B4E0N1;B4DM01;Q59F56 B4DSY1 B4DSY1 SKIV2L;SKI2W Helicase SKI2W MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.8969 2 683.89178 1365.76901 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.83 1 128.83 128.33 129.33 0 0 0 0 0.0051809 1 84034 57.598 42.338 1 24337 1031 9180 9392 38134 38134 812 LVAAGSYQR 9 0 1 Unmodified _LVAAGSYQR_ 0 0 0 U3KQ54;Q6P1K2 U3KQ54 U3KQ54 PMF1-BGLAP;PMF1 Polyamine-modulated factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.7685 2 482.764166 963.513779 87568.38 0.068605 3.312E-05 -0.03142 -1.5168E-05 0.037185 1.7952E-05 482.763592474605 487.768881171701 25.51 0.30288 25.51 25.372 25.675 0 52 16 4 0 0 0 0.042881 1 11106 40.882 22.151 1 0.94093 0.9846 0 12836000 6244400 6591900 24338 1852 9181 9393 38135 38135 LVAAGSYQR 9 0 1 Unmodified _LVAAGSYQR_ 0 0 0 U3KQ54;Q6P1K2 U3KQ54 U3KQ54 PMF1-BGLAP;PMF1 Polyamine-modulated factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.7701 2 482.764166 963.513779 91470.67 0.16205 7.8231E-05 -0.29553 -0.00014267 -0.13349 -6.4442E-05 482.763850541266 487.769052967154 25.244 0.42899 25.244 25.062 25.49 0 45 16 6 0 0 0 0.021548 1 10856 49.418 20.906 1 0.90987 0.89899 0 15059000 7825900 7232700 24339 1852 9181 9393 38136 38136 LVAFCPFASSQVALENANAVSEGVVHEDLR 30 0 1 Unmodified _LVAFCPFASSQVALENANAVSEGVVHEDLR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1077.5392 3 1077.20306 3228.58736 57974.56 0.43461 0.00046817 0.62198 0.00067 1.0566 0.0011382 1077.53827275048 1081.20848720576 123.09 0.66462 123.09 122.81 123.47 0 459 51 13 0 0 0 5.9082E-17 2 79692 71.528 71.528 1 0.70566 0.7828 0 67678000 38524000 29155000 24340 785 9182 9394 38137;38138 38138 LVAFCPFASSQVALENANAVSEGVVHEDLR 30 0 1 Unmodified _LVAFCPFASSQVALENANAVSEGVVHEDLR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1081.209 3 1077.20306 3228.58736 58044.91 0.52922 0.00057007 0.33819 0.0003643 0.86741 0.00093437 1077.87190550128 1080.87404832149 122.62 0.65287 122.62 122.32 122.97 7.6294E-06 459 52 13 0 0 0 3.7496E-11 2 81243 55.158 51.6 1 0.69855 0.80027 0 83995000 48535000 35460000 24341 785 9182 9394 38139;38140 38140 LVAFCPFASSQVALENANAVSEGVVHEDLR 30 0 1 Unmodified _LVAFCPFASSQVALENANAVSEGVVHEDLR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1080.8754 3 1077.20306 3228.58736 57790.7 0.73309 0.00078969 0.42774 0.00046077 1.1608 0.0012505 1077.53810399369 1080.87403576105 134.34 0.32913 134.34 134.23 134.56 0 113 14 15 0 0 0 8.9071E-56 2 81972 149.07 141.96 1 0.89498 0.77696 0 215980000 108460000 107520000 24342 785 9182 9394 38141;38142 38141 LVAFCPFASSQVALENANAVSEGVVHEDLR 30 0 1 Unmodified _LVAFCPFASSQVALENANAVSEGVVHEDLR_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1077.8744 3 1077.20306 3228.58736 58177.37 0.44271 0.00047689 0.28301 0.00030486 0.72572 0.00078175 1077.53791688044 1080.87380640219 134.27 0.42102 134.27 134.17 134.59 -1.5259E-05 103 17 13 0 0 0 4.7329E-36 2 81013 123.36 123.36 1 0.93416 0.81592 0 196670000 99658000 97011000 24343 785 9182 9394 38143;38144 38143 LVAGEMGQNEPDQGGQR 17 0 1 Oxidation (M) _LVAGEM(ox)GQNEPDQGGQR_ LVAGEM(1)GQNEPDQGGQR LVAGEM(174.9)GQNEPDQGGQR 0 1 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.9118 2 901.410314 1800.80607 63546.48 0.56403 0.00050843 -0.054821 -4.9416E-05 0.50921 0.00045901 901.410564917273 906.414438119026 21.738 0.39103 21.738 21.596 21.987 0 153 24 9 0 0 0 2.5145E-46 2 7950 174.9 168.87 1 2.523 2.5808 0 35710000 10003000 25707000 24344 555 9183 9395 38145;38146 38146 410 LVAGEMGQNEPDQGGQR 17 0 1 Oxidation (M) _LVAGEM(ox)GQNEPDQGGQR_ LVAGEM(1)GQNEPDQGGQR LVAGEM(206.69)GQNEPDQGGQR 0 1 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.4089 2 901.410314 1800.80607 64001.04 0.48541 0.00043755 -0.1946 -0.00017542 0.2908 0.00026213 901.410113161923 906.414399962063 21.715 0.42519 21.715 21.464 21.89 -1.9073E-06 141 20 9 0 0 0 6.6059E-82 2 7791 206.69 196.08 1 2.6131 2.9665 0 48594000 13486000 35109000 24345 555 9183 9395 38147;38148 38148 410 LVAIVDVIDQNR 12 0 1 Unmodified _LVAIVDVIDQNR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.8928 2 677.888084 1353.76161 73592.4 0.76119 0.000516 -0.25668 -0.000174 0.50451 0.000342 677.888122548815 682.892132180961 107.1 1.9174 107.1 106.62 108.53 -7.6294E-06 781 145 10 0 0 0 9.786E-18 4 66974 140.16 118.79 1 0.96053 1.1384 0 507860000 250070000 257790000 24346 645;725 9184 9396 38149;38150;38151;38152 38152 LVAIVDVIDQNR 12 0 1 Unmodified _LVAIVDVIDQNR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.8931 2 677.888084 1353.76161 73361.43 0.85848 0.00058195 -0.27055 -0.0001834 0.58793 0.00039855 677.888143105279 682.892061050499 106.45 1.8285 106.45 105.99 107.82 0 791 133 11 0 0 0 2.7554E-08 4 67508 119.16 109.66 1 0.95925 1.1274 0 923850000 459350000 464500000 24347 645;725 9184 9396 38153;38154;38155;38156 38153 LVAIVDVIDQNR 12 0 1 Unmodified _LVAIVDVIDQNR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.8928 2 677.888084 1353.76161 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.89 1 107.89 107.39 108.39 0 0 0 0 9.1697E-11 1 68948 114.5 73.467 1 24348 645;725 9184 9396 38157 38157 LVAIVDVIDQNR 12 0 1 Unmodified _LVAIVDVIDQNR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 677.8884 2 677.888084 1353.76161 73953.85 0.81141 0.00055005 -0.062491 -4.2362E-05 0.74892 0.00050768 677.88816386478 682.892118329075 118.37 1.9628 118.37 117.98 119.94 0 449 89 10 0 0 0 1.1843E-17 5 69754 137.98 126.76 1 0.90143 0.77958 0 116830000 62173000 54652000 24349 645;725 9184 9396 38158;38159;38160;38161;38162 38159 LVAIVDVIDQNR 12 0 1 Unmodified _LVAIVDVIDQNR_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.8887 2 677.888084 1353.76161 73376.48 0.66661 0.00045188 -0.10746 -7.2846E-05 0.55915 0.00037904 677.888106583212 682.892064649562 118.14 1.5896 118.14 117.8 119.39 0 434 72 10 0 0 0 2.2866E-05 5 68678 102.06 96.281 1 0.91131 0.79557 0 108550000 56266000 52288000 24350 645;725 9184 9396 38163;38164;38165;38166;38167 38164 LVARPEPATGYTLEFR 16 0 2 Unmodified _LVARPEPATGYTLEFR_ 0 0 1 B3KTA3;Q16658 B3KTA3 B3KTA3 FSCN1 Fascin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.001 3 607.328221 1818.96283 NaN NaN NaN 0.15674 9.519E-05 NaN NaN NaN NaN 81.03 0.91803 81.03 80.69 81.608 -7.6294E-06 0 0 0 0.0062003 1 48156 52.372 43.208 1 NaN NaN 0 17413000 0 17413000 24351 942 9185 9397 38168 38168 LVARPEPATGYTLEFR 16 0 2 Unmodified _LVARPEPATGYTLEFR_ 0 0 1 B3KTA3;Q16658 B3KTA3 B3KTA3 FSCN1 Fascin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.0005 3 607.328221 1818.96283 77462.27 0.69983 0.00042502 -0.08986 -5.4575E-05 0.60997 0.00037045 607.66235562805 614.000319439272 79.659 0.60797 79.659 79.331 79.939 7.6294E-06 232 48 7 0 0 0 1.0332E-06 2 48279 85.619 85.619 1 2.907 3.2993 0 34375000 9116800 25258000 24352 942 9185 9397 38169;38170 38169 LVARPEPATGYTLEFR 16 0 2 Unmodified _LVARPEPATGYTLEFR_ 0 0 1 B3KTA3;Q16658 B3KTA3 B3KTA3 FSCN1 Fascin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.0015 3 607.328221 1818.96283 78587.77 0.4591 0.00027882 0.41603 0.00025266 0.87513 0.00053149 607.329412617582 614.334634719637 92.593 0.46616 92.593 92.331 92.797 -7.6294E-06 97 22 7 0 0 0 0.043208 1 51501 14.041 14.041 1 1.6927 1.5321 0 3196600 1061900 2134800 24353 942 9185 9397 38171 38171 LVARPEPATGYTLEFR 16 0 2 Unmodified _LVARPEPATGYTLEFR_ 0 0 1 B3KTA3;Q16658 B3KTA3 B3KTA3 FSCN1 Fascin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.0011 3 607.328221 1818.96283 79740.6 0.30359 0.00018438 0.3832 0.00023273 0.68679 0.00041711 607.329407432263 614.000544815638 92.275 0.54268 92.275 92.042 92.585 -7.6294E-06 115 26 7 0 0 0 0.0055736 1 50530 30.107 30.107 1 1.4401 1.2882 0 2196400 813210 1383200 24354 942 9185 9397 38172 38172 LVAWDPACLPLPPPPPAFK 19 1 0 Unmodified _LVAWDPACLPLPPPPPAFK_ 0 0 0 P17676 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1048.0726 2 1043.56335 2085.11214 NaN NaN NaN -0.86277 -0.00090036 NaN NaN NaN NaN 132.55 0.138 132.55 132.49 132.62 0 0 0 0 0.044482 1 88817 29.544 20.256 1 NaN NaN 0 1806000 0 1806000 24355 1493 9186 9398 38173 38173 LVCSGENDNHGQIANLPSAVTSDQK 25 1 0 Unmodified _LVCSGENDNHGQIANLPSAVTSDQK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.4267 3 885.420679 2653.24021 64934.23 0.39894 0.00035323 -0.16204 -0.00014347 0.2369 0.00020976 885.755254224864 888.426663846857 67.187 0.50806 67.187 66.951 67.459 0 214 39 9 0 0 0 2.9007E-12 3 38751 66.871 53.279 1 1.1518 1.135 0 24486000 10295000 14191000 24356 1945 9187 9399 38174;38175;38176 38176 LVCSGENDNHGQIANLPSAVTSDQK 25 1 0 Unmodified _LVCSGENDNHGQIANLPSAVTSDQK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.4254 3 885.420679 2653.24021 66308.63 0.31598 0.00027977 -0.030753 -2.7229E-05 0.28522 0.00025254 885.755299420321 888.426371154882 66.142 0.50632 66.142 65.87 66.376 0 247 42 8 0 0 0 3.237E-14 3 38985 86.211 79.018 1 1.2612 1.2846 0 26060000 13497000 12562000 24357 1945 9187 9399 38177;38178;38179 38179 LVCSGENDNHGQIANLPSAVTSDQK 25 1 0 Unmodified _LVCSGENDNHGQIANLPSAVTSDQK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 885.755 3 885.420679 2653.24021 63316.88 0.32968 0.00029191 -0.12754 -0.00011293 0.20214 0.00017898 885.755415402815 888.42641520505 77.21 0.7092 77.21 76.901 77.611 0 309 49 10 0 0 0 3.8612E-12 2 41258 63.906 52.762 1 2.346 1.8505 0 17804000 5068500 12736000 24358 1945 9187 9399 38180;38181 38181 LVCSGENDNHGQIANLPSAVTSDQK 25 1 0 Unmodified _LVCSGENDNHGQIANLPSAVTSDQK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 888.4265 3 885.420679 2653.24021 64767.14 0.22794 0.00020182 0.033887 3.0005E-05 0.26183 0.00023183 885.755192560023 888.426494427794 77.49 0.57969 77.49 77.241 77.821 0 294 38 11 0 0 0 1.3076E-09 2 40574 56.72 43.399 1 2.3444 1.881 0 18564000 5680700 12884000 24359 1945 9187 9399 38182;38183 38182 LVDEDFPEDSSSQK 14 1 0 Unmodified _LVDEDFPEDSSSQK_ 0 0 0 A0A0C4DGW6;A6NDU8 A0A0C4DGW6 A0A0C4DGW6 C5orf51 UPF0600 protein C5orf51 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.3655 2 798.357207 1594.69986 68495.19 0.42401 0.00033851 0.058355 4.6588E-05 0.48236 0.0003851 798.357376399361 802.364276354654 53.035 0.44492 53.035 52.721 53.166 0 86 33 4 0 0 0 0.0073196 1 29479 40.589 34.056 1 1.8582 1.9396 0 11801000 3346400 8454300 24360 519 9188 9400 38184 38184 LVDEDFPEDSSSQK 14 1 0 Unmodified _LVDEDFPEDSSSQK_ 0 0 0 A0A0C4DGW6;A6NDU8 A0A0C4DGW6 A0A0C4DGW6 C5orf51 UPF0600 protein C5orf51 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.3644 2 798.357207 1594.69986 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.713 1 51.713 51.213 52.213 0 0 0 0 0.0082074 1 29365 53.08 25.982 1 24361 519 9188 9400 38185 38185 LVDEDFPEDSSSQK 14 1 0 Unmodified _LVDEDFPEDSSSQK_ 0 0 0 A0A0C4DGW6;A6NDU8 A0A0C4DGW6 A0A0C4DGW6 C5orf51 UPF0600 protein C5orf51 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.3583 2 798.357207 1594.69986 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.875 1 51.875 51.375 52.375 3.8147E-06 0 0 0 0.019728 1 29478 44.543 36.897 1 24362 519 9188 9400 38186 38186 LVDEEPQLTK 10 1 0 Unmodified _LVDEEPQLTK_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.3145 2 586.313886 1170.61322 NaN NaN NaN 0.77725 0.00045571 NaN NaN NaN NaN 47.981 0.2785 47.981 47.828 48.107 3.8147E-06 0 0 0 0.0024463 1 26090 80.455 37.208 1 NaN NaN 0 21028000 21028000 0 24363 455 9189 9401 38187 38187 LVDEEPQLTK 10 1 0 Unmodified _LVDEEPQLTK_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.3164 2 586.313886 1170.61322 85159.98 0.65406 0.00038348 0.76085 0.0004461 1.4149 0.00082958 586.313411546203 590.321799376319 46.897 0.52542 46.897 46.713 47.238 0 126 46 6 0 0 0 0.00097153 1 25945 78.264 55.221 1 0.65127 0.69009 0 23501000 13915000 9586400 24364 455 9189 9401 38188 38188 LVDEEPQLTK 10 1 0 Unmodified _LVDEEPQLTK_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.3218 2 586.313886 1170.61322 78324.9 0.46893 0.00027494 -0.65105 -0.00038172 -0.18211 -0.00010678 586.314014534283 590.321013029834 55.863 0.51044 55.863 55.558 56.068 0 123 32 6 0 0 0 0.0096567 1 27475 54.416 38.214 1 1.0587 0.8273 0 3415000 1336900 2078100 24365 455 9189 9401 38189 38189 LVDHIDQTPGFSLQQLR 17 0 1 Unmodified _LVDHIDQTPGFSLQQLR_ 0 0 0 F1T0L5;Q8N8A6 F1T0L5 F1T0L5 DDX51 ATP-dependent RNA helicase DDX51 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.6869 3 656.349685 1966.02722 NaN NaN NaN 0.50407 0.00033085 NaN NaN NaN NaN 94.909 0.3299 94.909 94.747 95.076 0 0 0 0 0.0043739 1 59092 41.422 31.141 1 NaN NaN 0 8807600 0 8807600 24366 1251 9190 9402 38190 38190 LVDIIAAVPPQYR 13 0 1 Unmodified _LVDIIAAVPPQYR_ 0 0 0 Q9H9T3;E5RHY2;E5RIC0;E5RIZ7;E5RHR2 Q9H9T3 Q9H9T3 ELP3 Elongator complex protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8734 2 727.921926 1453.8293 NaN NaN NaN 0.23815 0.00017336 NaN NaN NaN NaN 110.68 0.32289 110.68 110.57 110.9 0 0 0 0 0.0010334 1 69550 78.098 62.436 1 NaN NaN 0 2241500 0 2241500 24367 2047 9191 9403 38191 38191 LVDIIAAVPPQYR 13 0 1 Unmodified _LVDIIAAVPPQYR_ 0 0 0 Q9H9T3;E5RHY2;E5RIC0;E5RIZ7;E5RHR2 Q9H9T3 Q9H9T3 ELP3 Elongator complex protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.9277 2 727.921926 1453.8293 NaN NaN NaN 0.20328 0.00014798 NaN NaN NaN NaN 110 0.35422 110 109.86 110.22 -7.6294E-06 0 0 0 0.0022799 1 70736 70.552 50.222 1 NaN NaN 0 3708000 0 3708000 24368 2047 9191 9403 38192 38192 LVDLPLGLPFYK 12 1 0 Unmodified _LVDLPLGLPFYK_ 0 0 0 Q14669;H7C2Y1 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.9121 2 687.905214 1373.79587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.28 1 129.28 128.78 129.78 0 0 0 0 0.00014698 1 84285 87.913 43.604 1 24369 1736 9192 9404 38193 38193 LVDLPLGLPFYK 12 1 0 Unmodified _LVDLPLGLPFYK_ 0 0 0 Q14669;H7C2Y1 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.913 2 687.905214 1373.79587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.8 1 128.8 128.3 129.3 0 0 0 0 1.8062E-10 1 86062 108.67 53.1 1 24370 1736 9192 9404 38194 38194 LVDLPLGLPFYK 12 1 0 Unmodified _LVDLPLGLPFYK_ 0 0 0 Q14669;H7C2Y1 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.9069 2 687.905214 1373.79587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.83 1 128.83 128.33 129.33 0 0 0 0 0.00022023 1 86075 84.213 61.473 1 24371 1736 9192 9404 38195 38195 LVDNFQHEENLLQQVASK 18 1 0 Unmodified _LVDNFQHEENLLQQVASK_ 0 0 0 Q14669;Q57Z94 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.3678 3 704.695521 2111.06473 74341.77 0.88558 0.00062406 -0.033062 -2.3299E-05 0.85252 0.00060077 705.029819010156 707.367409220583 110.64 0.31483 110.64 110.48 110.79 -7.6294E-06 58 14 7 0 0 0 1.6636E-05 1 63936 56.817 56.817 1 1.5911 1.252 0 4004500 1369400 2635100 24372 1736 9193 9405 38196 38196 LVDPVAGSGGPGSR 14 0 1 Unmodified _LVDPVAGSGGPGSR_ 0 0 0 A0A0S2Z5J7;A0A024QZC1;O95400 A0A0S2Z5J7 A0A0S2Z5J7 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.8347 2 634.833308 1267.65206 NaN NaN NaN -0.086859 -5.5141E-05 NaN NaN NaN NaN 46.535 0.48576 46.535 46.27 46.756 0 0 0 0 0.00065816 1 25195 77.593 57.807 1 NaN NaN 0 14154000 14154000 0 24373 15 9194 9406 38197 38197 LVDPVAGSGGPGSR 14 0 1 Unmodified _LVDPVAGSGGPGSR_ 0 0 0 A0A0S2Z5J7;A0A024QZC1;O95400 A0A0S2Z5J7 A0A0S2Z5J7 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.8361 2 634.833308 1267.65206 77070.83 0.68675 0.00043597 0.052157 3.3111E-05 0.73891 0.00046909 634.83333857422 639.837333132216 45.56 0.43292 45.56 45.345 45.777 0 160 37 6 0 0 0 7.4827E-05 2 25009 89.301 70.521 1 0.74093 0.80458 0 28224000 16401000 11823000 24374 15 9194 9406 38198;38199 38199 LVDPVAGSGGPGSR 14 0 1 Unmodified _LVDPVAGSGGPGSR_ 0 0 0 A0A0S2Z5J7;A0A024QZC1;O95400 A0A0S2Z5J7 A0A0S2Z5J7 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.8335 2 634.833308 1267.65206 77413.93 0.46002 0.00029204 -0.61457 -0.00039015 -0.15455 -9.811E-05 634.833093776448 639.836682950441 53.682 0.4541 53.682 53.4 53.854 0 100 33 4 0 0 0 0.030898 1 26035 30.872 19.382 1 0.63599 0.54892 0 1022000 576240 445710 24375 15 9194 9406 38200 38200 LVDQNLNK 8 1 0 Unmodified _LVDQNLNK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.2714 2 472.263999 942.513445 90708.9 -0.057716 -2.7257E-05 0.27714 0.00013089 0.21943 0.00010363 472.264030470483 476.271118069165 23.384 0.4538 23.384 23.145 23.599 1.9073E-06 83 21 5 0 0 0 0.011764 2 9332 69.176 59.189 1 2.4797 2.4672 0 26193000 8412000 17781000 24376 1391 9195 9407 38201;38202 38202 LVDQNLNK 8 1 0 Unmodified _LVDQNLNK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.2711 2 472.263999 942.513445 NaN NaN NaN 0.55299 0.00026116 NaN NaN NaN NaN 23.134 0.39779 23.134 22.965 23.363 0 0 0 0 0.012636 1 9053 73.324 52.377 1 NaN NaN 0 12866000 0 12866000 24377 1391 9195 9407 38203 38203 LVDQSGPPHEPK 12 1 0 Unmodified _LVDQSGPPHEPK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.3432 2 652.335684 1302.65681 75392.28 0.85456 0.00055746 0.51043 0.00033297 1.365 0.00089043 652.837599200481 656.342890934322 20.645 0.18069 20.645 20.54 20.721 0 24 5 6 0 0 0 1.7783E-12 1 6928 126.19 126.19 1 2.1243 2.1621 0 12429000 4278200 8150300 24378 5 9196 9408 38204 38204 LVDSPDIQPVGTCEK 15 1 0 Unmodified _LVDSPDIQPVGTCEK_ 0 0 0 Q9UQR0;B4DZR9 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.4075 2 829.40872 1656.80289 66993.09 0.30063 0.00024934 0.086359 7.1627E-05 0.38699 0.00032097 829.408751759743 833.917589905764 67.096 0.39366 67.096 66.884 67.278 0 78 28 5 0 0 0 1.5569E-05 1 38686 88.803 83.313 1 0.45772 0.4591 0 9867500 7024200 2843300 24379 2118 9197 9409 38205 38205 LVDSPDIQPVGTCEK 15 1 0 Unmodified _LVDSPDIQPVGTCEK_ 0 0 0 Q9UQR0;B4DZR9 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.9103 2 829.40872 1656.80289 67104.98 0.48958 0.00040606 1.4731 0.0012218 1.9627 0.0016278 829.909730887431 833.420472765653 66.012 0.43509 66.012 65.8 66.235 0 120 37 5 0 0 0 1.7366E-06 2 38924 99.215 99.215 1 1.0045 1.0488 0 10946000 5342800 5602700 24380 2118 9197 9409 38206;38207 38207 LVDSPDIQPVGTCEK 15 1 0 Unmodified _LVDSPDIQPVGTCEK_ 0 0 0 Q9UQR0;B4DZR9 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.9189 2 829.40872 1656.80289 67546.96 0.55786 0.0004627 0.17355 0.00014395 0.73142 0.00060664 829.409025686429 833.917568809083 76.782 0.7066 76.782 76.354 77.061 0 143 46 6 0 0 0 0.00018855 3 40969 77.124 70.74 1 0.90918 0.76666 0 2111800 1055500 1056300 24381 2118 9197 9409 38208;38209;38210 38210 LVDSPDIQPVGTCEK 15 1 0 Unmodified _LVDSPDIQPVGTCEK_ 0 0 0 Q9UQR0;B4DZR9 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.9123 2 829.40872 1656.80289 67374.94 0.63717 0.00052847 1.0049 0.0008335 1.6421 0.001362 829.408900022204 833.917730151866 77.116 0.48074 77.116 76.862 77.343 0 120 30 5 0 0 0 0.036574 1 40317 24.853 24.853 1 0.83641 0.67507 0 2989800 1629500 1360200 24382 2118 9197 9409 38211 38211 LVDTAWLEIMTK 12 1 0 Unmodified _LVDTAWLEIMTK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.3894 2 710.381245 1418.74794 NaN NaN NaN -0.63629 -0.00045201 NaN NaN NaN NaN 134.24 0.34697 134.24 134.08 134.43 0 0 0 0 0.00083731 1 81864 84.658 75.003 1 NaN NaN 0 5843400 0 5843400 24383 2103 9198 9410 38212 38212 LVDTAWLEIMTK 12 1 0 Unmodified _LVDTAWLEIMTK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.3895 2 710.381245 1418.74794 NaN NaN NaN -0.13254 -9.4153E-05 NaN NaN NaN NaN 134.08 0.38794 134.08 133.85 134.24 0 0 0 0 0.014535 1 80799 53.237 26.723 1 NaN NaN 0 3798000 0 3798000 24384 2103 9198 9410 38213 38213 LVDTAWLEIMTK 12 1 0 Oxidation (M) _LVDTAWLEIM(ox)TK_ LVDTAWLEIM(1)TK LVDTAWLEIM(40.73)TK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.3867 2 718.378703 1434.74285 NaN NaN NaN 0.11726 8.4236E-05 NaN NaN NaN NaN 117.51 0.48048 117.51 117.26 117.75 0 0 0 0 0.018448 1 68216 40.727 29.563 1 NaN NaN 0 3646100 0 3646100 24385 2103 9198 9411 38214 38214 1929 LVDTFLEDVK 10 1 0 Unmodified _LVDTFLEDVK_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.8193 2 589.818804 1177.62306 NaN NaN NaN 0.080476 4.7466E-05 NaN NaN NaN NaN 109.57 0.66157 109.57 109.33 109.99 0 0 0 0 0.048422 1 63162 47.187 21.293 1 NaN NaN 0 1971700 1971700 0 + 24386 1164 9199 9412 38215 38215 LVEALCAEHQINLIK 15 1 0 Unmodified _LVEALCAEHQINLIK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.3231 3 584.32219 1749.94474 77883.94 0.46173 0.0002698 0.17754 0.00010374 0.63927 0.00037354 584.32288692572 586.993651265675 88.483 1.2097 88.483 87.839 89.049 0 541 94 8 0 0 0 0.00021818 3 53342 51.695 51.695 1 1.2566 1.4304 0 169300000 70719000 98585000 24387 1515 9200 9413 38216;38217;38218 38218 LVEALCAEHQINLIK 15 1 0 Unmodified _LVEALCAEHQINLIK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.9854 2 875.979647 1749.94474 66611.36 0.41385 0.00036252 -0.043063 -3.7722E-05 0.37079 0.0003248 875.979712941623 879.986445865071 88.474 0.61266 88.474 88.125 88.738 0 140 46 5 0 0 0 4.4442E-07 1 53186 102.97 102.97 1 1.3667 1.4515 0 31580000 15136000 16444000 24388 1515 9200 9413 38219 38219 LVEALCAEHQINLIK 15 1 0 Unmodified _LVEALCAEHQINLIK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.4891 2 875.979647 1749.94474 NaN NaN NaN -0.25585 -0.00022412 NaN NaN NaN NaN 87.098 0.5873 87.098 86.905 87.492 0 0 0 0 7.0616E-23 2 53635 134.56 117.54 1 NaN NaN 0 10436000 0 10436000 24389 1515 9200 9413 38220;38221 38221 LVEALCAEHQINLIK 15 1 0 Unmodified _LVEALCAEHQINLIK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3231 3 584.32219 1749.94474 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.297 1 87.297 86.797 87.797 0 0 0 0 0.0045219 1 53795 67.846 42.128 1 24390 1515 9200 9413 38222 38222 LVEALCAEHQINLIK 15 1 0 Unmodified _LVEALCAEHQINLIK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.994 3 584.32219 1749.94474 78903.02 0.50106 0.00029278 -0.2139 -0.00012499 0.28716 0.00016779 584.322115100358 586.993484223336 87.222 0.90239 87.222 86.784 87.687 0 392 72 8 0 0 0 0.018843 1 53541 34.909 34.909 1 1.2362 1.3873 0 115070000 51414000 63660000 24391 1515 9200 9413 38223 38223 LVEALCAEHQINLIK 15 1 0 Unmodified _LVEALCAEHQINLIK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.3225 3 584.32219 1749.94474 79534.52 0.38742 0.00022638 -0.045259 -2.6446E-05 0.34216 0.00019993 584.32259273498 586.99358708641 101.09 1.0116 101.09 100.65 101.67 0 346 68 9 0 0 0 0.040694 1 57218 18.364 18.364 1 1.1669 0.90692 0 15259000 5529300 9729700 24392 1515 9200 9413 38224 38224 LVEALCAEHQINLIK 15 1 0 Unmodified _LVEALCAEHQINLIK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 875.9795 2 875.979647 1749.94474 65419.31 0.16997 0.00014889 0.29952 0.00026237 0.46949 0.00041126 875.980318687752 880.488259970189 100.77 0.567 100.77 100.58 101.15 0 188 41 7 0 0 0 0.0023357 2 56240 39.179 35.755 1 1.2265 1.0069 0 5244900 2382600 2862300 24393 1515 9200 9413 38225;38226 38226 LVEFSAFLEQQR 12 0 1 Unmodified _LVEFSAFLEQQR_ 0 0 0 H0YE88;P28347;E9PKB7;H0YEJ9;Q59EF3 H0YE88 H0YE88 TEAD1 Transcriptional enhancer factor TEF-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.8903 2 733.885541 1465.75653 71599.13 0.62882 0.00046148 1.8324 0.0013448 2.4612 0.0018062 734.387217904294 739.896489948387 109.89 0.75523 109.89 109.52 110.27 0 214 54 7 0 0 0 8.1241E-05 2 68789 96.89 92.968 1 0.942 0.97 0 24751000 9765700 14985000 24394 1291 9201 9414 38227;38228 38228 LVEFSAFLEQQR 12 0 1 Unmodified _LVEFSAFLEQQR_ 0 0 0 H0YE88;P28347;E9PKB7;H0YEJ9;Q59EF3 H0YE88 H0YE88 TEAD1 Transcriptional enhancer factor TEF-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.8902 2 733.885541 1465.75653 72560.06 0.78278 0.00057447 -0.20634 -0.00015143 0.57644 0.00042304 733.885063234538 738.889944494943 109.25 0.61475 109.25 108.9 109.51 0 158 43 6 0 0 0 3.5535E-06 2 70047 111.06 111.06 1 0.68252 0.68881 0 19682000 13133000 6549100 24395 1291 9201 9414 38229;38230 38230 LVEFSAFLEQQR 12 0 1 Unmodified _LVEFSAFLEQQR_ 0 0 0 H0YE88;P28347;E9PKB7;H0YEJ9;Q59EF3 H0YE88 H0YE88 TEAD1 Transcriptional enhancer factor TEF-1 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 733.8858 2 733.885541 1465.75653 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.74 1 120.74 120.24 121.24 0 0 0 0 0.00056919 1 70837 78.655 32.497 1 24396 1291 9201 9414 38231 38231 LVEFSAFLEQQRDPDSYNK 19 1 1 Unmodified _LVEFSAFLEQQRDPDSYNK_ 0 0 1 H0YE88;P28347;E9PKB7;Q59EF3 H0YE88 H0YE88 TEAD1 Transcriptional enhancer factor TEF-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.0486 3 762.706085 2285.09643 68919.83 0.9319 0.00071077 -0.21385 -0.0001631 0.71805 0.00054766 763.039997837247 768.713249802397 112.35 0.79448 112.35 112.11 112.91 0 181 41 9 0 0 0 0.0025021 1 65225 31.462 31.462 1 0.99817 0.84199 0 7675500 4085900 3589500 24397 1291 9202 9415 38232 38232 LVEFSAFLEQQRDPDSYNK 19 1 1 Unmodified _LVEFSAFLEQQRDPDSYNK_ 0 0 1 H0YE88;P28347;E9PKB7;Q59EF3 H0YE88 H0YE88 TEAD1 Transcriptional enhancer factor TEF-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.7144 3 762.706085 2285.09643 69056.49 0.78188 0.00059634 -0.36762 -0.00028038 0.41426 0.00031596 763.039606797483 769.047720546107 112.2 0.58643 112.2 111.94 112.53 7.6294E-06 160 31 9 0 0 0 1.44E-05 2 64246 55.589 55.589 1 0.80179 0.67176 0 5487600 2657100 2830500 24398 1291 9202 9415 38233;38234 38233 LVEGPPPPPEPPK 13 1 0 Unmodified _LVEGPPPPPEPPK_ 0 0 0 E7ESL0;J3KQY1;Q9NWU5 E7ESL0 E7ESL0 MRPL22 39S ribosomal protein L22, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3815 2 677.374278 1352.734 79760.66 0.89743 0.0006079 -0.38404 -0.00026014 0.51339 0.00034776 677.374209028391 681.380490234696 60.189 0.55785 60.189 60.012 60.57 0 106 49 4 0 0 0 0.00021073 3 34305 69.979 66.595 1 1.0959 1.1286 0 12874000 6432900 6441600 24399 1222 9203 9416 38235;38236;38237 38235 LVEGPPPPPEPPK 13 1 0 Unmodified _LVEGPPPPPEPPK_ 0 0 0 E7ESL0;J3KQY1;Q9NWU5 E7ESL0 E7ESL0 MRPL22 39S ribosomal protein L22, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3821 2 677.374278 1352.734 79617.97 0.59148 0.00040065 0.51249 0.00034715 1.104 0.0007478 677.37461527553 681.381360320558 59.324 0.54044 59.324 59.048 59.589 -3.8147E-06 140 48 5 0 0 0 0.00012952 2 34540 84.17 84.17 1 1.0797 1.1141 0 18314000 9660100 8654000 24400 1222 9203 9416 38238;38239 38239 LVEIDNGK 8 1 0 Unmodified _LVEIDNGK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.2524 2 444.245275 886.475997 90798.75 -0.15902 -7.0646E-05 0.46085 0.00020473 0.30183 0.00013409 444.245807277502 448.252593070023 29.734 0.34909 29.734 29.614 29.963 1.9073E-06 96 29 5 0 0 0 0.0068997 1 14458 85.265 34.633 1 1.186 1.3405 0 83714000 35869000 47845000 24401 1440 9204 9417 38240 38240 LVEIDNGK 8 1 0 Unmodified _LVEIDNGK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.2527 2 444.245275 886.475997 NaN NaN NaN -0.33875 -0.00015049 NaN NaN NaN NaN 29.219 0.34493 29.219 29.08 29.425 1.9073E-06 0 0 0 6.7995E-05 1 14079 119.56 67.154 1 NaN NaN 0 42050000 0 42050000 24402 1440 9204 9417 38241 38241 LVELSAENEK 10 1 0 Unmodified _LVELSAENEK_ 0 0 0 P49716 P49716 P49716 CEBPD CCAAT/enhancer-binding protein delta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.3055 2 566.298236 1130.58192 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.982 1 39.982 39.482 40.482 3.8147E-06 0 0 0 0.00044847 1 21274 72.928 24.134 1 24403 1586 9205 9418 38242 38242 LVELSAENEK 10 1 0 Unmodified _LVELSAENEK_ 0 0 0 P49716 P49716 P49716 CEBPD CCAAT/enhancer-binding protein delta ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.3044 2 566.298236 1130.58192 NaN NaN NaN -0.51005 -0.00028884 NaN NaN NaN NaN 46.834 0.35835 46.834 46.662 47.02 0 0 0 0 0.039892 1 22133 49.418 25.99 1 NaN NaN 0 923780 0 923780 24404 1586 9205 9418 38243 38243 LVEQLDIEETEQSK 14 1 0 Unmodified _LVEQLDIEETEQSK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.9249 2 830.917432 1659.82031 NaN NaN NaN 0.10849 9.0143E-05 NaN NaN NaN NaN 72.871 0.53813 72.871 72.581 73.119 0 0 0 0 1.6113E-09 3 42771 107.18 80.661 1 NaN NaN 0 11154000 0 11154000 24405 305 9206 9419 38244;38245;38246 38245 LVEQLDIEETEQSK 14 1 0 Unmodified _LVEQLDIEETEQSK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.9252 2 830.917432 1659.82031 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.621 1 71.621 71.121 72.121 0 0 0 0 0.00021877 1 42959 89.403 46.122 1 24406 305 9206 9419 38247 38247 LVEQLDIEETEQSK 14 1 0 Unmodified _LVEQLDIEETEQSK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.9177 2 830.917432 1659.82031 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.622 1 71.622 71.122 72.122 7.6294E-06 0 0 0 0.016919 1 42960 45.879 28.07 1 24407 305 9206 9419 38248 38248 LVEQLDIEETEQSK 14 1 0 Unmodified _LVEQLDIEETEQSK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.9241 2 830.917432 1659.82031 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.731 1 71.731 71.231 72.231 0 0 0 0 1.1505E-10 1 43045 111.94 65.33 1 24408 305 9206 9419 38249 38249 LVEQLDIEETEQSK 14 1 0 Unmodified _LVEQLDIEETEQSK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.9245 2 830.917432 1659.82031 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.815 1 71.815 71.315 72.315 0 0 0 0 4.7386E-24 1 43099 134.75 81.071 1 24409 305 9206 9419 38250 38250 LVEQLDIEETEQSK 14 1 0 Unmodified _LVEQLDIEETEQSK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 835.4261 2 830.917432 1659.82031 69253.26 0.51082 0.00042445 0.47711 0.00039644 0.98793 0.00082089 830.917378866553 834.925098640276 83.327 0.46323 83.327 83.096 83.559 0 78 28 4 0 0 0 0.0041692 3 45392 45.911 30.939 1 1.7404 1.3511 0 3556100 1301200 2254900 24410 305 9206 9419 38251;38252;38253 38251 LVEQLDIEETEQSK 14 1 0 Unmodified _LVEQLDIEETEQSK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20;Q8N6F2 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.4167 2 830.917432 1659.82031 69916.29 0.77773 0.00064623 -0.27937 -0.00023214 0.49835 0.00041409 831.418562154513 834.924422430503 83.54 0.39157 83.54 83.344 83.735 0 56 21 4 0 0 0 0.023159 1 44778 33.057 17.914 1 1.7191 1.3578 0 3211200 1093600 2117500 24411 305 9206 9419 38254 38254 LVESDAEAEAVR 12 0 1 Unmodified _LVESDAEAEAVR_ 0 0 0 Q69YP1;Q5JY65;Q9BZJ0;Q8IXG0 Q69YP1 Q69YP1 DKFZp762M013;CRNKL1;crn Crooked neck-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8225 2 644.822606 1287.63066 78120.61 0.49252 0.00031759 -0.28748 -0.00018537 0.20504 0.00013222 644.822311930846 649.82665892304 39.694 0.35319 39.694 39.569 39.922 -3.8147E-06 74 29 4 0 0 0 0.00011875 1 20626 94.692 75.912 1 1.1551 1.1659 0 15522000 6876400 8645900 24412 1810 9207 9420 38255 38255 LVESDAEAEAVR 12 0 1 Unmodified _LVESDAEAEAVR_ 0 0 0 Q69YP1;Q5JY65;Q9BZJ0;Q8IXG0 Q69YP1 Q69YP1 DKFZp762M013;CRNKL1;crn Crooked neck-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.8232 2 644.822606 1287.63066 76035.2 0.34865 0.00022482 -0.38074 -0.00024551 -0.032086 -2.069E-05 644.822419007226 650.328234239789 46.389 0.53442 46.389 46.142 46.677 0 48 28 4 0 0 0 0.062359 1 21831 30.612 25.829 1 1.054 0.96412 0 586870 315160 271710 24413 1810 9207 9420 38256 38256 LVETDFSTPTPR 12 0 1 Unmodified _LVETDFSTPTPR_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.8462 2 681.848624 1361.6827 NaN NaN NaN -1.5926 -0.0010859 NaN NaN NaN NaN 68.699 0.48737 68.699 68.458 68.945 0 0 0 0 4.2657E-05 1 39833 96.171 79.838 1 NaN NaN 0 7721600 7721600 0 24414 1849 9208 9421 38257 38257 LVETDFSTPTPR 12 0 1 Unmodified _LVETDFSTPTPR_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.8467 2 681.848624 1361.6827 NaN NaN NaN -0.62146 -0.00042374 NaN NaN NaN NaN 67.546 0.46193 67.546 67.363 67.825 0 0 0 0 4.9285E-05 1 40039 94.692 62.372 1 NaN NaN 0 15748000 15748000 0 24415 1849 9208 9421 38258 38258 LVETDFSTPTPR 12 0 1 Unmodified _LVETDFSTPTPR_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.8542 2 681.848624 1361.6827 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.552 1 67.552 67.052 68.052 0 0 0 0 1.3289E-06 1 40028 98.249 68.439 1 24416 1849 9208 9421 38259 38259 LVETDFSTPTPR 12 0 1 Unmodified _LVETDFSTPTPR_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.8495 2 681.848624 1361.6827 73088.63 0.55374 0.00037757 0.10913 7.4413E-05 0.66287 0.00045198 681.848542025848 686.852717964752 78.609 0.55969 78.609 78.34 78.9 0 160 35 7 0 0 0 0.00068455 1 42284 67.334 61.553 1 1.4532 1.215 0 3647700 1439200 2208400 24417 1849 9208 9421 38260 38260 LVETDFSTPTPR 12 0 1 Unmodified _LVETDFSTPTPR_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.8492 2 681.848624 1361.6827 74388.98 0.56294 0.00038384 0.18857 0.00012857 0.7515 0.00051241 681.848502463869 686.852894693944 78.874 0.5937 78.874 78.594 79.188 0 156 38 6 0 0 0 0.0003692 1 41558 72.006 72.006 1 1.4654 1.2952 0 3742500 1445700 2296700 24418 1849 9208 9421 38261 38261 LVETLEDQELK 11 1 0 Unmodified _LVETLEDQELK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.8597 2 658.850832 1315.68711 73713.36 0.86799 0.00057188 0.46911 0.00030907 1.3371 0.00088095 658.850868370148 662.857920662949 67.81 0.87638 67.81 67.495 68.372 0 332 74 7 0 0 0 8.5874E-11 2 39139 136.63 88.211 1 0.92307 1.0424 0 107930000 51245000 56682000 24419 1803 9209 9422 38262;38263 38262 LVETLEDQELK 11 1 0 Unmodified _LVETLEDQELK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.8584 2 658.850832 1315.68711 74676.57 0.62692 0.00041305 0.32721 0.00021558 0.95413 0.00062863 658.850892223439 662.857924637504 66.642 0.89355 66.642 66.388 67.282 0 348 75 8 0 0 0 3.7938E-10 2 39321 132.01 93.924 1 0.87617 0.99221 0 135710000 66999000 68713000 24420 1803 9209 9422 38264;38265 38264 LVETLEDQELK 11 1 0 Unmodified _LVETLEDQELK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.8511 2 658.850832 1315.68711 74429.24 0.51871 0.00034175 0.16963 0.00011176 0.68834 0.00045351 658.850656212992 662.857878920175 77.7 1.3131 77.7 77.334 78.647 -7.6294E-06 433 88 9 0 0 0 7.8974E-05 2 41496 98.044 68.957 1 1.4928 1.2111 0 26235000 10571000 15664000 24421 1803 9209 9422 38266;38267 38267 LVETLEDQELK 11 1 0 Unmodified _LVETLEDQELK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.8583 2 658.850832 1315.68711 73509.28 0.64686 0.00042618 0.12835 8.4565E-05 0.77521 0.00051075 658.850665837305 662.857795307998 78.056 1.6597 78.056 77.472 79.132 0 413 108 8 0 0 0 2.1273E-05 4 40893 104.42 72.009 1 1.4615 1.2039 0 29122000 12305000 16818000 24422 1803 9209 9422 38268;38269;38270;38271 38269 LVEVDSGR 8 0 1 Unmodified _LVEVDSGR_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 P20700 P20700 LMNB1 Lamin-B1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.7389 2 437.735074 873.455596 NaN NaN NaN 0.37289 0.00016323 NaN NaN NaN NaN 25.563 0.46809 25.563 25.372 25.84 0 0 0 0 0.013769 1 11274 71.501 31.398 1 NaN NaN 0 11783000 0 11783000 24423 1502 9210 9423 38272 38272 LVFAAYGNVFSAFAR 15 0 1 Unmodified _LVFAAYGNVFSAFAR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.4352 2 816.930283 1631.84601 67989.41 0.894 0.00073034 0.053039 4.3329E-05 0.94704 0.00077367 816.930423161361 821.93435087832 127.56 0.72859 127.56 127.34 128.07 0 247 46 8 0 0 0 4.6388E-10 3 83039 113.22 109.24 1 0.81978 0.82299 0 16060000 8046600 8013400 24424 486 9211 9424 38273;38274;38275 38274 LVFAAYGNVFSAFAR 15 0 1 Unmodified _LVFAAYGNVFSAFAR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.9347 2 816.930283 1631.84601 68049.09 0.94294 0.00077032 0.11678 9.5403E-05 1.0597 0.00086572 817.431536755674 821.934443106559 127.19 0.81816 127.19 126.92 127.74 -7.6294E-06 241 49 8 0 0 0 4.2949E-07 2 84792 103.91 97.25 1 0.85107 0.8528 0 18349000 9407600 8941100 24425 486 9211 9424 38276;38277 38277 LVFLGEQSVGK 11 1 0 Unmodified _LVFLGEQSVGK_ 0 0 0 Q6FGX3;Q53ET8;A0A024R5J5;A0A024R5H8;P20340;Q6AZ91;Q9NRW1;F5H3K7;C9J0I2;F5GX61 Q6FGX3 Q6FGX3 RAB6A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-6B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8425 2 588.834788 1175.65502 NaN NaN NaN -0.28428 -0.0001674 NaN NaN NaN NaN 82.208 0.4987 82.208 81.955 82.454 0 0 0 0 0.0013489 1 49040 83.948 49.14 1 NaN NaN 0 7341000 0 7341000 24426 182 9212 9425 38278 38278 LVFLGEQSVGK 11 1 0 Unmodified _LVFLGEQSVGK_ 0 0 0 Q6FGX3;Q53ET8;A0A024R5J5;A0A024R5H8;P20340;Q6AZ91;Q9NRW1;F5H3K7;C9J0I2;F5GX61 Q6FGX3 Q6FGX3 RAB6A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-6B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.8415 2 588.834788 1175.65502 79640.3 0.81863 0.00048204 -0.47131 -0.00027752 0.34733 0.00020452 588.834445920567 592.841734261988 81.113 0.55055 81.113 80.839 81.39 0 138 47 4 0 0 0 0.00054053 1 49531 74.376 39.568 1 1.5873 1.6077 0 12989000 4585300 8403200 24427 182 9212 9425 38279 38279 LVFLGLDNAGK 11 1 0 Unmodified _LVFLGLDNAGK_ 0 0 0 Q8NG23;Q6FID4;Q5SQT9;Q9NR31;X1WI22;D6RAA2;Q5SQT8;D6RDB2;D6RD69;Q53F37;B2R679;Q9Y6B6 Q8NG23 Q8NG23 SARA1;SAR1A;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.8369 2 573.829506 1145.64446 NaN NaN NaN 0.22488 0.00012904 NaN NaN NaN NaN 99.871 0.80141 99.871 99.462 100.26 0 0 0 0 0.0017968 1 61015 80.688 64.486 1 NaN NaN 0 21200000 0 21200000 24428 1815 9213 9426 38280 38280 LVFPGAQR 8 0 1 Unmodified _LVFPGAQR_ 0 0 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 444.2583 2 444.25852 886.502486 90115.5 -0.012957 -5.7564E-06 0.23442 0.00010414 0.22146 9.8385E-05 444.258503556979 449.262719887099 56.43 0.72259 56.43 56.028 56.75 3.8147E-06 229 53 5 0 0 0 0.0059854 1 32356 88.734 38.615 1 0.93184 1.0647 0 89980000 46096000 43885000 24429 1286 9214 9427 38281 38281 LVFPGAQR 8 0 1 Unmodified _LVFPGAQR_ 0 0 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 444.2583 2 444.25852 886.502486 92669.91 -0.033155 -1.473E-05 0.47805 0.00021238 0.44489 0.00019765 444.258541593626 449.262883253194 66.053 1.0228 66.053 65.68 66.703 0 285 74 5 0 0 0 0.013081 1 33439 66.138 32.285 1 1.2187 1.0111 0 5515400 2434600 3080800 24430 1286 9214 9427 38282 38282 LVFSNVNLK 9 1 0 Unmodified _LVFSNVNLK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.3066 2 517.305667 1032.59678 83832.01 0.88599 0.00045833 -0.25977 -0.00013438 0.62622 0.00032394 517.305437455683 521.312519974941 80.832 0.89383 80.832 80.452 81.346 0 377 76 8 0 0 0 0.0031664 1 48008 72.485 28.038 1 0.70885 0.80145 0 145600000 81426000 64175000 24431 1770 9215 9428 38283 38283 LVFSNVNLK 9 1 0 Unmodified _LVFSNVNLK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.3128 2 517.305667 1032.59678 84101.95 0.63656 0.0003293 -0.25014 -0.0001294 0.38642 0.0001999 517.305446797244 521.312496277822 79.694 0.74322 79.694 79.331 80.075 0 329 58 8 0 0 0 2.2949E-05 2 48382 115.69 42.289 1 0.70789 0.80984 0 160320000 92392000 67924000 24432 1770 9215 9428 38284;38285 38284 LVFSNVNLK 9 1 0 Unmodified _LVFSNVNLK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.306 2 517.305667 1032.59678 84300.29 0.36606 0.00018936 0.37573 0.00019437 0.74179 0.00038373 517.305684036683 521.312919929773 92.574 0.92216 92.574 91.949 92.871 7.6294E-06 230 45 8 0 0 0 0.010956 2 51496 58.815 22.114 1 1.2549 1.0295 0 37007000 17515000 19492000 24433 1770 9215 9428 38286;38287 38287 LVFSNVNLK 9 1 0 Unmodified _LVFSNVNLK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.3048 2 517.305667 1032.59678 84726.96 0.10791 5.5824E-05 0.23288 0.00012047 0.34079 0.00017629 517.305621942226 521.312821027848 92.327 1.1032 92.327 91.775 92.878 -7.6294E-06 261 62 8 0 0 0 0.0056953 2 50481 66.073 24.421 1 1.2865 1.0348 0 22621000 10136000 12485000 24434 1770 9215 9428 38288;38289 38289 LVGDVDFEGVR 11 0 1 Unmodified _LVGDVDFEGVR_ 0 0 0 B2R7W0;P13995;B4DY35;B9A062 B2R7W0 B2R7W0 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.3163 2 603.311677 1204.6088 NaN NaN NaN 0.26663 0.00016086 NaN NaN NaN NaN 81.894 0.55881 81.894 81.573 82.132 0 0 0 0 0.0030546 1 48722 68.657 51.031 1 NaN NaN 0 17380000 0 17380000 24435 853 9216 9429 38290 38290 LVGIISSR 8 0 1 Unmodified _LVGIISSR_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.7701 2 422.766178 843.517802 92176.56 0.18496 7.8196E-05 -0.18885 -7.9837E-05 -0.0038831 -1.6417E-06 422.765962750152 427.770190389641 57.008 1.1145 57.008 56.523 57.638 3.8147E-06 438 91 7 0 0 0 0.0092293 1 31968 75.213 7.2319 1 1.3551 1.524 0 95478000 41668000 53810000 24436 1282 9217 9430 38291 38291 LVGIISSR 8 0 1 Unmodified _LVGIISSR_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.7703 2 422.766178 843.517802 91832.2 -0.19171 -8.105E-05 0.14014 5.9245E-05 -0.051576 -2.1805E-05 422.76608730664 427.770332145476 55.743 1.0007 55.743 55.349 56.35 0 404 78 7 0 0 0 0.0099928 1 31841 73.26 8.0079 1 1.2702 1.4469 0 105460000 44918000 60539000 24437 1282 9217 9430 38292 38292 LVGLESFSLAFASVQK 16 1 0 Unmodified _LVGLESFSLAFASVQK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.4702 2 848.469438 1694.92432 68338.08 0.89948 0.00076318 0.074045 6.2825E-05 0.97352 0.000826 848.469271795668 852.977797230111 127.62 0.48022 127.62 127.41 127.89 7.6294E-06 114 31 5 0 0 0 9.1628E-06 1 83097 87.001 87.001 1 1.3259 1.332 0 7424200 4096300 3327900 24438 1412 9218 9431 38293 38293 LVGLESFSLAFASVQK 16 1 0 Unmodified _LVGLESFSLAFASVQK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.4708 2 848.469438 1694.92432 66698.72 0.91758 0.00077854 -0.014382 -1.2203E-05 0.90319 0.00076633 848.970871992667 852.977842109788 127.25 0.41775 127.25 127.06 127.47 0 103 25 5 0 0 0 2.3115E-05 1 84873 85.845 85.845 1 1.1768 1.1907 0 9009800 4586500 4423400 24439 1412 9218 9431 38294 38294 LVGQGASAVLLDLPNSGGEAQAK 23 1 0 Unmodified _LVGQGASAVLLDLPNSGGEAQAK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1098.5895 2 1098.08696 2194.15936 58551.3 0.23535 0.00025843 0.35316 0.00038781 0.58851 0.00064624 1098.08717384866 1102.09446947895 106.38 0.60887 106.38 106.09 106.7 0 299 43 9 0 0 0 0.0013998 1 65909 33.265 33.265 1 2.0362 2.2866 0 68329000 20822000 47507000 24440 555 9219 9432 38295 38295 LVGQGASAVLLDLPNSGGEAQAK 23 1 0 Unmodified _LVGQGASAVLLDLPNSGGEAQAK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1102.5952 2 1098.08696 2194.15936 58619.89 0.20474 0.00022482 0.29774 0.00032694 0.50248 0.00055176 1098.5885801494 1102.59586367926 105.76 0.58646 105.76 105.49 106.08 -7.6294E-06 311 43 10 0 0 0 9.3378E-30 3 67075 131.56 131.56 1 2.0634 2.324 0 69269000 21088000 48182000 24441 555 9219 9432 38296;38297;38298 38297 LVGQGASAVLLDLPNSGGEAQAK 23 1 0 Unmodified _LVGQGASAVLLDLPNSGGEAQAK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1098.5896 2 1098.08696 2194.15936 58007.99 0.33403 0.0003668 0.27013 0.00029663 0.60417 0.00066343 1098.58872382012 1102.59580064431 117.85 0.4976 117.85 117.63 118.13 -7.6294E-06 150 21 10 0 0 0 1.6544E-07 2 69444 51.147 51.147 1 1.4622 1.1591 0 18707000 7835000 10872000 24442 555 9219 9432 38299;38300 38300 LVGQGASAVLLDLPNSGGEAQAK 23 1 0 Unmodified _LVGQGASAVLLDLPNSGGEAQAK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1098.0869 2 1098.08696 2194.15936 58395.02 0.011944 1.3116E-05 0.40595 0.00044577 0.4179 0.00045889 1098.58887175016 1102.59607824886 117.69 0.44218 117.69 117.44 117.89 7.6294E-06 163 21 10 0 0 0 1.7675E-05 2 68377 44.807 44.807 1 1.3824 1.1108 0 16336000 6723600 9612200 24443 555 9219 9432 38301;38302 38302 LVGQSIIAYLQK 12 1 0 Unmodified _LVGQSIIAYLQK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.8991 2 666.89792 1331.78129 76744.85 0.97784 0.00065212 -0.12599 -8.4022E-05 0.85185 0.0005681 666.897849595404 670.904864087735 110.98 0.57169 110.98 110.72 111.29 0 157 36 6 0 0 0 1.8864E-12 2 69688 125.48 91.149 1 1.3987 1.5095 0 37171000 16027000 21144000 24444 1607 9220 9433 38303;38304 38303 LVGQSIIAYLQK 12 1 0 Unmodified _LVGQSIIAYLQK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.8992 2 666.89792 1331.78129 76049.6 0.55556 0.0003705 -0.10371 -6.9165E-05 0.45185 0.00030134 666.897886796329 670.904890969196 110.23 0.49498 110.23 110.08 110.57 0 150 33 7 0 0 0 8.6843E-06 2 70905 108.67 80.654 1 1.5123 1.5624 0 32891000 14249000 18642000 24445 1607 9220 9433 38305;38306 38306 LVGQSIIAYLQK 12 1 0 Unmodified _LVGQSIIAYLQK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.4066 2 666.89792 1331.78129 74584.78 0.86331 0.00057574 -0.092412 -6.1629E-05 0.7709 0.00051411 666.897872989439 670.904973081358 122.6 0.384 122.6 122.41 122.79 7.6294E-06 95 18 6 0 0 0 0.00758 2 73093 48.423 34.654 1 0.82562 0.65396 0 6307800 3601300 2706500 24446 1607 9220 9433 38307;38308 38307 LVGQSIIAYLQK 12 1 0 Unmodified _LVGQSIIAYLQK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.8984 2 666.89792 1331.78129 75895.23 0.8801 0.00058693 0.035104 2.3411E-05 0.9152 0.00061035 666.897987792717 670.905042177091 122.37 0.39156 122.37 122.22 122.61 0 77 18 7 0 0 0 0.0021107 2 72108 59.426 41.78 1 0.86635 0.71217 0 9830000 4985900 4844100 24447 1607 9220 9433 38309;38310 38310 LVGSVNLFSDENVPR 15 0 1 Unmodified _LVGSVNLFSDENVPR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.431 2 823.430844 1644.84713 67676.23 0.78013 0.00064238 0.40435 0.00033295 1.1845 0.00097534 823.4310369137 828.435118362693 101.48 0.78209 101.48 101.11 101.89 0 386 59 9 0 0 0 2.5115E-30 2 62134 151.98 151.98 1 0.86028 0.95746 0 78411000 40370000 38041000 24448 1997 9221 9434 38311;38312 38311 LVGSVNLFSDENVPR 15 0 1 Unmodified _LVGSVNLFSDENVPR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.4374 2 823.430844 1644.84713 67762.73 0.73673 0.00060665 0.18416 0.00015165 0.9209 0.00075829 823.430894350968 828.43521632662 100.7 0.79936 100.7 100.38 101.18 7.6294E-06 388 63 8 0 0 0 2.2711E-22 2 63139 147.71 147.71 1 0.87251 0.99732 0 89115000 48936000 40179000 24449 1997 9221 9434 38313;38314 38314 LVGSVNLFSDENVPR 15 0 1 Unmodified _LVGSVNLFSDENVPR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 823.9337 2 823.430844 1644.84713 66249.32 1.251 0.0010301 0.19753 0.00016265 1.4485 0.0011928 823.43072555236 828.435733107462 113.74 0.83431 113.74 113.3 114.14 0 228 39 10 0 0 0 1.7366E-06 2 66209 99.215 90.486 1 1.0333 0.87562 0 31974000 15154000 16820000 24450 1997 9221 9434 38315;38316 38315 LVGSVNLFSDENVPR 15 0 1 Unmodified _LVGSVNLFSDENVPR_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 823.4321 2 823.430844 1644.84713 66684.24 0.82222 0.00067704 0.12273 0.00010106 0.94494 0.0007781 823.430695894148 828.435370621742 113.6 0.63934 113.6 113.31 113.95 7.6294E-06 207 30 9 0 0 0 3.3697E-16 1 65216 137.16 128.65 1 0.98654 0.86055 0 30609000 15434000 15174000 24451 1997 9221 9434 38317 38317 LVHIIGALR 9 0 1 Unmodified _LVHIIGALR_ 0 0 0 A0A024R2F9;Q9BTV4;A0A0S2Z5N2;Q8TEP9 A0A024R2F9 A0A024R2F9 TMEM43;FLJ00144 Transmembrane protein 43 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 331.2187 3 331.218555 990.633835 NaN NaN NaN -0.096622 -3.2003E-05 NaN NaN NaN NaN 68.82 0.44748 68.82 68.438 68.885 0 0 0 0 0.0089555 1 39761 44.349 23.79 1 NaN NaN 0 2595400 2595400 0 24452 110 9222 9435 38318 38318 LVHIIGALR 9 0 1 Unmodified _LVHIIGALR_ 0 0 0 A0A024R2F9;Q9BTV4;A0A0S2Z5N2;Q8TEP9 A0A024R2F9 A0A024R2F9 TMEM43;FLJ00144 Transmembrane protein 43 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 331.2184 3 331.218555 990.633835 NaN NaN NaN -0.0075793 -2.5104E-06 NaN NaN NaN NaN 65.849 0.79466 65.849 65.451 66.246 7.6294E-06 0 0 0 0.014383 1 38673 39.022 13.083 1 NaN NaN 0 6259300 6259300 0 24453 110 9222 9435 38319 38319 LVHLPSCTVFSNFPVIK 17 1 0 Unmodified _LVHLPSCTVFSNFPVIK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.3585 3 653.357123 1957.04954 75101.17 1.0134 0.00066214 -0.6407 -0.00041861 0.37274 0.00024353 653.691253163916 656.362807746605 115.63 1.1965 115.63 115.27 116.47 0 423 78 10 0 0 0 4.617E-05 2 73436 54.859 54.859 1 0.77956 0.84061 0 34188000 18225000 15963000 24454 876 9223 9436 38320;38321 38321 LVHLPSCTVFSNFPVIK 17 1 0 Unmodified _LVHLPSCTVFSNFPVIK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.6915 3 653.357123 1957.04954 75584.96 0.78838 0.0005151 -0.062097 -4.0571E-05 0.72629 0.00047452 653.691427134703 656.362850292006 114.79 0.66776 114.79 114.45 115.12 7.6294E-06 304 42 9 0 0 0 2.1214E-05 2 74597 71.08 71.08 1 0.91043 1.0232 0 73552000 38058000 35493000 24455 876 9223 9436 38322;38323 38323 LVHLPSCTVFSNFPVIK 17 1 0 Unmodified _LVHLPSCTVFSNFPVIK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.6923 3 653.357123 1957.04954 74009.7 1.0897 0.00071199 -0.55123 -0.00036015 0.53851 0.00035184 653.691441901388 656.362167477553 126.28 1.1708 126.28 125.69 126.86 1.5259E-05 220 46 12 0 0 0 1.534E-05 2 75891 77.746 77.746 1 1.3762 1.1425 0 45886000 24112000 21774000 24456 876 9223 9436 38324;38325 38325 LVHLPSCTVFSNFPVIK 17 1 0 Unmodified _LVHLPSCTVFSNFPVIK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.6917 3 653.357123 1957.04954 74505.33 0.71816 0.00046921 0.049483 3.233E-05 0.76764 0.00050154 653.691564663664 656.028566736583 126.1 0.96394 126.1 125.8 126.77 -7.6294E-06 258 41 10 0 0 0 5.5007E-05 2 74799 51.888 51.888 1 1.4129 1.1716 0 35252000 15327000 19925000 24457 876 9223 9436 38326;38327 38327 LVHSAVDVPTIQEK 14 1 0 Unmodified _LVHSAVDVPTIQEK_ 0 0 0 Q15326;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.6195 3 512.619112 1534.83551 85282.13 0.36762 0.00018845 -0.12821 -6.5722E-05 0.23941 0.00012273 512.619111717611 515.29044669108 58.16 0.62742 58.16 57.685 58.312 0 212 49 7 0 0 0 0.00053009 1 33677 51.658 51.658 1 1.4113 1.4291 0 29166000 12168000 16998000 24458 1758 9224 9437 38328 38328 LVHSAVDVPTIQEK 14 1 0 Unmodified _LVHSAVDVPTIQEK_ 0 0 0 Q15326;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.6193 3 512.619112 1534.83551 85870.34 0.36421 0.0001867 -0.59059 -0.00030275 -0.22638 -0.00011605 512.61890390721 515.624768826203 69.386 0.63911 69.386 69.094 69.733 0 172 43 6 0 0 0 0.059368 1 35615 15.64 15.64 1 1.972 1.5473 0 3812100 1857200 1954900 24459 1758 9224 9437 38329 38329 LVIASTLYEDGTLDDGEYNPTDDRPSR 27 0 2 Unmodified _LVIASTLYEDGTLDDGEYNPTDDRPSR_ 0 0 1 C9JLU1;P52434 C9JLU1 C9JLU1 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1011.8151 3 1004.80714 3011.3996 60186.55 0.59948 0.00060236 -0.4075 -0.00040946 0.19197 0.0001929 1005.14019083573 1011.81328723754 101.09 1.0366 101.09 100.64 101.68 0 219 77 5 0 0 0 1.5157E-10 3 62143 57.578 57.578 1 1.1649 1.2586 0 19677000 8184400 11493000 24460 1138 9225 9438 38330;38331;38332 38332 LVIASTLYEDGTLDDGEYNPTDDRPSR 27 0 2 Unmodified _LVIASTLYEDGTLDDGEYNPTDDRPSR_ 0 0 1 C9JLU1;P52434 C9JLU1 C9JLU1 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1011.8141 3 1004.80714 3011.3996 60184.01 0.46819 0.00047044 -0.25756 -0.0002588 0.21063 0.00021164 1005.14061225455 1011.81333589365 100.32 1.1859 100.32 99.757 100.94 0 300 95 7 0 0 0 0.00065615 2 62908 29.855 29.855 1 1.4052 1.623 0 67972000 35457000 32514000 24461 1138 9225 9438 38333;38334 38333 LVIASTLYEDGTLDDGEYNPTDDRPSR 27 0 2 Unmodified _LVIASTLYEDGTLDDGEYNPTDDRPSR_ 0 0 1 C9JLU1;P52434 C9JLU1 C9JLU1 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1005.4772 3 1004.80714 3011.3996 59974.02 0.63057 0.0006336 0.059992 6.028E-05 0.69056 0.00069388 1005.14112446097 1012.14690877187 112.9 0.44708 112.9 112.74 113.19 -7.6294E-06 99 19 9 0 0 0 0.04997 1 65681 14.264 12.07 1 1.0174 0.86693 0 7124300 2981700 4142600 24462 1138 9225 9438 38335 38335 LVIASTLYEDGTLDDGEYNPTDDRPSR 27 0 2 Unmodified _LVIASTLYEDGTLDDGEYNPTDDRPSR_ 0 0 1 C9JLU1;P52434 C9JLU1 C9JLU1 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1005.1432 3 1004.80714 3011.3996 60451.25 0.31502 0.00031654 0.15392 0.00015466 0.46894 0.0004712 1005.14163136029 1012.1481192444 112.91 0.43734 112.91 112.68 113.12 0 85 20 7 0 0 0 0.0012266 1 64747 24.276 22.023 1 0.93139 0.84256 0 3819200 1445300 2373900 24463 1138 9225 9438 38336 38336 LVIDVIR 7 0 1 Unmodified _LVIDVIR_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.2726 2 414.271096 826.527639 94638.8 0.50526 0.00020931 -0.05022 -2.0805E-05 0.45504 0.00018851 414.270931240663 419.275153044409 86.385 0.6313 86.385 86.051 86.682 0 145 48 5 0 0 0 0.032902 1 51939 64.803 7.3398 1 0.86712 0.89127 0 25323000 12812000 12512000 24464 1739 9226 9439 38337 38337 LVIECGADCNILSK 14 1 0 Unmodified _LVIECGADCNILSK_ 0 0 0 Q99549 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.397 2 796.394558 1590.77456 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.399 1 84.399 83.899 84.899 0 0 0 0 0.0015839 1 50588 71.555 43.542 1 24465 1994 9227 9440 38338 38338 LVIECGADCNILSK 14 1 0 Unmodified _LVIECGADCNILSK_ 0 0 0 Q99549 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 796.8978 2 796.394558 1590.77456 64617.71 0.91584 0.00072937 0.78852 0.00062797 1.7044 0.0013573 796.897484522409 800.40152902206 96.798 0.55515 96.798 96.484 97.039 0 142 30 7 0 0 0 0.0018127 1 54313 51.013 51.013 1 1.3721 1.0878 0 4265000 1820300 2444700 24466 1994 9227 9440 38339 38339 LVIECGADCNILSK 14 1 0 Unmodified _LVIECGADCNILSK_ 0 0 0 Q99549 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 796.8979 2 796.394558 1590.77456 65178.81 0.45442 0.00036189 0.64394 0.00051283 1.0984 0.00087472 796.897060987112 800.402000943895 96.649 0.72962 96.649 96.365 97.095 0 151 36 7 0 0 0 0.0072378 1 53468 40.727 36.027 1 1.5078 1.2035 0 4111000 1525300 2585700 24467 1994 9227 9440 38340 38340 LVIEEAER 8 0 1 Unmodified _LVIEEAER_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2F4;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.7643 2 479.763832 957.513111 86307.48 0.35835 0.00017192 0.11871 5.6955E-05 0.47706 0.00022888 479.764010345942 484.767767673577 42.691 0.30699 42.691 42.536 42.843 0 90 25 5 0 0 0 0.008243 2 22742 79.469 9.0051 1 2.8239 3.0442 0 48005000 12374000 35631000 24468 721 9228 9441 38341;38342 38341 LVIIEGDLER 10 0 1 Unmodified _LVIIEGDLER_ 0 0 0 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;Q8NAG3;B4DWT5;Q5VU61;A0A087WWU8;J3KN67;M1VPF4;P06753;Q6LDX7;Q5VU62;B4DQ80;Q8NAH0 Q5HYB6 Q5HYB6 DKFZp686J1372;TPM3;TPM3-ROS1;HEL-S-82p Tyrosine-protein kinase receptor;Tropomyosin alpha-3 chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.8323 2 578.832246 1155.64994 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.281 1 85.281 84.781 85.781 0 0 0 0 0.015347 1 51215 55.549 22.709 1 24469 562 9229 9442 38343 38343 LVIIEGDLER 10 0 1 Unmodified _LVIIEGDLER_ 0 0 0 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;Q8NAG3;B4DWT5;Q5VU61;A0A087WWU8;J3KN67;M1VPF4;P06753;Q6LDX7;Q5VU62;B4DQ80;Q8NAH0 Q5HYB6 Q5HYB6 DKFZp686J1372;TPM3;TPM3-ROS1;HEL-S-82p Tyrosine-protein kinase receptor;Tropomyosin alpha-3 chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.8322 2 578.832246 1155.64994 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.342 1 85.342 84.842 85.842 0 0 0 0 0.00023767 1 51257 78.334 37.305 1 24470 562 9229 9442 38344 38344 LVIIEGDLER 10 0 1 Unmodified _LVIIEGDLER_ 0 0 0 Q5HYB6;B2RDE1;A0A0S2Z4I4;A0A0S2Z4G8;A0A0S2Z4G4;Q8NAG3;B4DWT5;Q5VU61;A0A087WWU8;J3KN67;M1VPF4;P06753;Q6LDX7;Q5VU62;B4DQ80;Q8NAH0 Q5HYB6 Q5HYB6 DKFZp686J1372;TPM3;TPM3-ROS1;HEL-S-82p Tyrosine-protein kinase receptor;Tropomyosin alpha-3 chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.8329 2 578.832246 1155.64994 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.345 1 84.345 83.845 84.845 -7.6294E-06 0 0 0 0.013298 1 51787 56.258 31.482 1 24471 562 9229 9442 38345 38345 LVIIESDLER 10 0 1 Unmodified _LVIIESDLER_ 0 0 0 Q1ZYL5;F5H7S3;D9YZV7;H7BYY1;H0YK48;B7Z722;B7Z596;Q59GR8;H0YKX5;Q8TCG4;H0YNC7;Q15657;H0YL52;D9YZV5;D9YZV4;A0A0S2Z4G6;A0A0K0K1I0;A0A024R5W6;Q6ZN40;P09493;H0YK20;H0YL42 Q1ZYL5 Q1ZYL5 TPM1 Tropomyosin alpha-1 chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.8409 2 593.837528 1185.6605 NaN NaN NaN -0.26262 -0.00015595 NaN NaN NaN NaN 85.346 0.18842 85.346 85.225 85.413 0 0 0 0 0.0095327 1 51280 63.816 29.563 1 NaN NaN 0 4960700 0 4960700 24472 1094 9230 9443 38346 38346 LVILANNCPALR 12 0 1 Unmodified _LVILANNCPALR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.3923 2 677.387197 1352.75984 73075.48 0.67846 0.00045958 -0.39515 -0.00026767 0.28331 0.00019191 677.38705358594 682.391118705243 87.072 1.0952 87.072 86.763 87.858 7.6294E-06 571 97 8 0 0 0 3.6077E-23 3 52898 160.75 160.75 1 0.70749 0.83719 0 331190000 189450000 141740000 24473 276 9231 9444 38347;38348;38349 38349 LVILANNCPALR 12 0 1 Unmodified _LVILANNCPALR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.3874 2 677.387197 1352.75984 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.888 1 87.888 87.388 88.388 0 0 0 0 0.0020799 1 52997 68.735 36.8 1 24474 276 9231 9444 38350 38350 LVILANNCPALR 12 0 1 Unmodified _LVILANNCPALR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.3913 2 677.387197 1352.75984 72938.88 0.37667 0.00025515 -0.12876 -8.7222E-05 0.24791 0.00016793 677.3872280601 682.391293863277 86.197 1.0433 86.197 85.871 86.915 0 572 90 8 0 0 0 4.0924E-29 4 53436 163.72 148.46 1 0.75163 0.86872 0 257970000 146700000 111270000 24475 276 9231 9444 38351;38352;38353;38354 38354 LVILANNCPALR 12 0 1 Unmodified _LVILANNCPALR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.3925 2 677.387197 1352.75984 72462.03 0.4887 0.00033104 0.0012818 8.6828E-07 0.48998 0.00033191 677.387308915297 682.391327874796 99.94 1.314 99.94 99.567 100.88 -7.6294E-06 526 100 8 0 0 0 0.00011181 4 56399 95.099 84.868 1 0.86331 0.74388 0 64672000 34203000 30468000 24476 276 9231 9444 38355;38356;38357;38358 38355 LVILANNCPALR 12 0 1 Unmodified _LVILANNCPALR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.3911 2 677.387197 1352.75984 73548.77 0.42027 0.00028468 -0.22904 -0.00015515 0.19123 0.00012954 677.387518154406 682.892640890342 100.86 0.66776 100.86 100.67 101.34 0 81 45 4 0 0 0 0.016432 1 57126 42.19 42.19 1 1.0275 0.89175 0 1934000 767510 1166500 24477 276 9231 9444 38359 38359 LVILANNCPALR 12 0 1 Unmodified _LVILANNCPALR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.3915 2 677.387197 1352.75984 71802.9 0.50622 0.00034291 -0.063225 -4.2828E-05 0.443 0.00030008 677.387297618363 682.391316180901 99.758 1.3128 99.758 99.37 100.68 0 548 110 8 0 0 0 0.00011181 4 55454 95.099 75.312 1 0.84004 0.7331 0 72808000 38095000 34713000 24478 276 9231 9444 38360;38361;38362;38363 38360 LVILANNCPALR 12 0 1 Unmodified _LVILANNCPALR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.3871 2 677.387197 1352.75984 74481.26 0.51685 0.00035011 -0.023691 -1.6048E-05 0.49316 0.00033406 677.387461506027 682.391231898583 100.77 0.24538 100.77 100.66 100.91 0 56 19 4 0 0 0 0.020531 2 56147 39.305 36.381 1 1.0552 0.92265 0 1396100 659120 736940 24479 276 9231 9444 38364;38365 38364 LVILANNCPALR 12 0 1 Unmodified _LVILANNCPALR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.387 2 677.387197 1352.75984 NaN NaN NaN 0.26882 0.0001821 NaN NaN NaN NaN 101.46 0.1781 101.46 101.34 101.51 0 0 0 0 0.042179 1 56645 43.083 34.619 1 NaN NaN 0 945530 945530 0 24480 276 9231 9444 38366 38366 LVILANNCPALRK 13 1 1 Unmodified _LVILANNCPALRK_ 0 0 1 E5RI99;A0A024R9D3;P62888 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.6331 3 494.625544 1480.8548 86037.2 0.16366 8.0951E-05 -0.29288 -0.00014487 -0.12922 -6.3916E-05 494.625315390858 500.63284360322 76.624 0.44987 76.624 76.41 76.86 -7.6294E-06 140 30 7 0 0 0 0.0051047 2 40848 35.677 35.677 1 0.91413 0.75399 0 4183800 2100600 2083200 24481 276 9232 9445 38367;38368 38367 LVILANNCPALRK 13 1 1 Unmodified _LVILANNCPALRK_ 0 0 1 E5RI99;A0A024R9D3;P62888 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.6253 3 494.625544 1480.8548 88242.27 0.065912 3.2602E-05 -0.20061 -9.9227E-05 -0.1347 -6.6625E-05 494.625359230646 500.632873700963 76.711 0.60699 76.711 76.484 77.091 0 154 42 6 0 0 0 0.043305 1 40145 18.073 18.073 1 0.94321 0.79728 0 3672300 1885700 1786600 24482 276 9232 9445 38369 38369 LVILEGELER 10 0 1 Unmodified _LVILEGELER_ 0 0 0 B4DVY2;V9HW56;P67936;V9HW25;Q5TCU3;CON__Q3SX28;A7XZE4;Q5TCU8;P07951;K7EMU5;U3KQK2;K7ERG3;K7ENT6;B4DGC2;K7EPV9;B4E3P1 B4DVY2 B4DVY2 HEL-S-108;TPM4;HEL-S-273;TPM2;TPM2b Tropomyosin alpha-4 chain;Tropomyosin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.8407 2 585.840071 1169.66559 79617.81 1.0894 0.00063822 -0.084292 -4.9382E-05 1.0051 0.00058884 585.840245436633 590.844217123289 90.712 0.65161 90.712 90.321 90.972 0 161 54 5 0 0 0 0.0079558 1 54768 56.729 56.729 1 1.7443 1.7799 0 26830000 9863400 16967000 + 24483 1043 9233 9446 38370 38370 LVILEGELER 10 0 1 Unmodified _LVILEGELER_ 0 0 0 B4DVY2;V9HW56;P67936;V9HW25;Q5TCU3;CON__Q3SX28;A7XZE4;Q5TCU8;P07951;K7EMU5;U3KQK2;K7ERG3;K7ENT6;B4DGC2;K7EPV9;B4E3P1 B4DVY2 B4DVY2 HEL-S-108;TPM4;HEL-S-273;TPM2;TPM2b Tropomyosin alpha-4 chain;Tropomyosin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.844 2 585.840071 1169.66559 78901 0.69556 0.00040749 -0.55063 -0.00032258 0.14493 8.4908E-05 586.341250051305 590.843786844124 89.738 0.54193 89.738 89.348 89.89 0 153 44 5 0 0 0 0.0010279 2 55384 77.355 77.355 1 1.8522 2.002 0 26833000 9886200 16947000 + 24484 1043 9233 9446 38371;38372 38371 LVINGNPITIFQER 14 0 1 Unmodified _LVINGNPITIFQER_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.4546 2 807.454122 1612.89369 68283.76 0.92889 0.00075004 -0.18593 -0.00015013 0.74296 0.00059991 807.45375123297 812.458156538494 116.89 0.7836 116.89 116.59 117.38 -7.6294E-06 344 56 10 0 0 0 1.4705E-06 3 74602 108.35 91.636 1 2.1359 2.4701 0 162860000 51883000 110980000 24485 1442 9234 9447 38373;38374;38375 38374 LVINGNPITIFQER 14 0 1 Unmodified _LVINGNPITIFQER_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.4547 2 807.454122 1612.89369 67983.76 0.68267 0.00055122 0.20379 0.00016455 0.88646 0.00071578 807.454114915951 812.458441843809 116.38 0.8066 116.38 116.08 116.88 7.6294E-06 302 50 11 0 0 0 3.8972E-05 2 76000 94.767 76.958 1 2.1779 2.4993 0 184780000 58731000 126050000 24486 1442 9234 9447 38376;38377 38377 LVINGNPITIFQER 14 0 1 Unmodified _LVINGNPITIFQER_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.4544 2 807.454122 1612.89369 68621.09 0.9348 0.00075481 -0.1615 -0.0001304 0.7733 0.00062441 807.955385562323 812.458153523841 128.81 0.72908 128.81 128.55 129.28 0 194 33 8 0 0 0 0.00011216 2 77797 96.103 69.985 1 1.4175 1.1607 0 16469000 6680900 9788000 24487 1442 9234 9447 38378;38379 38379 LVINGNPITIFQER 14 0 1 Unmodified _LVINGNPITIFQER_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 807.4539 2 807.454122 1612.89369 68559.59 0.8614 0.00069554 0.061884 4.9968E-05 0.92329 0.00074551 807.454016034336 812.458287739651 128.62 0.72522 128.62 128.32 129.05 0 182 28 10 0 0 0 6.6215E-05 2 76757 90.614 75.074 1 1.2298 1.0535 0 20885000 8872900 12012000 24488 1442 9234 9447 38380;38381 38381 LVINGNPITIFQERDPSK 18 1 1 Unmodified _LVINGNPITIFQERDPSK_ 0 0 1 V9HVZ4;P04406;Q2TSD0;Q0QET7;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.0414 3 681.04074 2040.10039 74702.97 0.71864 0.00048942 -0.11271 -7.6762E-05 0.60593 0.00041266 681.040570940831 687.048205306627 106.58 0.57938 106.58 106.31 106.89 -7.6294E-06 234 42 8 0 0 0 3.5707E-06 1 66213 81.692 65.926 1 3.0705 3.6286 0 37963000 10509000 27454000 24489 1442 9235 9448 38382 38382 LVINGNPITIFQERDPSK 18 1 1 Unmodified _LVINGNPITIFQERDPSK_ 0 0 1 V9HVZ4;P04406;Q2TSD0;Q0QET7;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3752 3 681.04074 2040.10039 74204.13 0.80412 0.00054764 0.029902 2.0365E-05 0.83402 0.000568 681.375163857367 687.382534377244 105.93 0.59343 105.93 105.59 106.18 0 223 45 8 0 0 0 1.5584E-05 3 67290 63.918 48.152 1 2.7073 3.1685 0 52624000 14276000 38348000 24490 1442 9235 9448 38383;38384;38385 38384 LVINGNPITIFQERDPSK 18 1 1 Unmodified _LVINGNPITIFQERDPSK_ 0 0 1 V9HVZ4;P04406;Q2TSD0;Q0QET7;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.3831 3 681.04074 2040.10039 73147.23 0.73583 0.00050113 -0.012494 -8.5087E-06 0.72334 0.00049262 681.040458092186 687.382379337565 117.62 0.43901 117.62 117.41 117.84 0 129 19 10 0 0 0 4.1227E-08 1 69279 90.793 67.231 1 1.8461 1.5828 0 10778000 3576400 7201300 24491 1442 9235 9448 38386 38386 LVINGNPITIFQERDPSK 18 1 1 Unmodified _LVINGNPITIFQERDPSK_ 0 0 1 V9HVZ4;P04406;Q2TSD0;Q0QET7;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.3825 3 681.04074 2040.10039 74425.65 0.57811 0.00039372 -0.022573 -1.5373E-05 0.55554 0.00037834 681.040859161662 687.382368467887 117.39 0.47089 117.39 117.17 117.64 0 134 21 9 0 0 0 0.0004235 1 68145 39.237 30.528 1 1.8326 1.5505 0 11289000 4321100 6967600 24492 1442 9235 9448 38387 38387 LVINTEEVFRPYAK 14 1 1 Unmodified _LVINTEEVFRPYAK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.3104 3 560.310279 1677.90901 80019.03 0.64858 0.00036341 -0.19366 -0.00010851 0.45492 0.0002549 560.644264446479 566.317985176482 92.399 0.83894 92.399 92.078 92.917 0 394 80 8 0 0 0 2.9928E-05 2 55915 75.102 75.102 1 0.58449 0.70229 0 73107000 44640000 28467000 24493 1665 9236 9449 38388;38389 38389 LVINTEEVFRPYAK 14 1 1 Unmodified _LVINTEEVFRPYAK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.3175 3 560.310279 1677.90901 80079.95 0.72205 0.00040457 0.01087 6.0903E-06 0.73292 0.00041066 560.310136999238 566.317758248986 91.281 0.70392 91.281 90.972 91.676 0 334 61 8 0 0 0 1.8453E-05 2 56368 93.206 93.206 1 0.61808 0.72742 0 80803000 45105000 35698000 24494 1665 9236 9449 38390;38391 38390 LVINTEEVFRPYAK 14 1 1 Unmodified _LVINTEEVFRPYAK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.6447 3 560.310279 1677.90901 80083.5 0.6006 0.00033652 -0.43736 -0.00024505 0.16324 9.1466E-05 560.644290959735 566.317404453189 105.31 0.70786 105.31 105.06 105.77 0 260 46 9 0 0 0 1.8453E-05 2 60039 76.588 70.29 1 0.33302 0.29086 0 23895000 17652000 6242900 24495 1665 9236 9449 38392;38393 38393 LVINTEEVFRPYAK 14 1 1 Unmodified _LVINTEEVFRPYAK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.3168 3 560.310279 1677.90901 79887.84 0.56314 0.00031553 -0.18978 -0.00010634 0.37336 0.0002092 560.310194701361 566.317709820214 105.02 0.70171 105.02 104.71 105.41 -7.6294E-06 252 44 9 0 0 0 0.00042746 2 58893 53.001 53.001 1 0.316 0.26859 0 29184000 21972000 7212700 24496 1665 9236 9449 38394;38395 38394 LVINTEEVFRPYAK 14 1 1 Unmodified _LVINTEEVFRPYAK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 840.4636 2 839.96178 1677.90901 67343.64 0.56912 0.00047804 -0.46206 -0.00038812 0.10705 8.9922E-05 839.960991311402 848.973183248472 105.01 0.50907 105.01 104.71 105.22 0 96 31 6 0 0 0 0.0034291 2 58993 59.418 50.229 1 0.28308 0.23756 0 5027700 3654600 1373100 24497 1665 9236 9449 38396;38397 38396 LVIQDK 6 1 0 Unmodified _LVIQDK_ 0 0 0 A2RUM7;P46777;Q59GX9;Q9BUV4;R4GNJ2 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 358.222 2 358.221072 714.42759 100381.1 0.095543 3.4225E-05 0.29109 0.00010427 0.38663 0.0001385 358.221092525575 362.228229373516 26.912 0.63431 26.912 26.723 27.357 0 135 36 6 0 0 0 0.040187 1 12197 107.65 12.704 1 0.84872 0.95536 0 73051000 39339000 33711000 24498 653 9237 9450 38398 38398 LVISHEEELIPLHK 14 1 0 Unmodified _LVISHEEELIPLHK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.654 3 552.982162 1655.92466 82239.14 0.65731 0.00036348 -0.091129 -5.0393E-05 0.56618 0.00031309 552.982087031132 555.653421497213 88.697 0.52161 88.697 88.457 88.978 0 165 33 7 0 0 0 0.0020648 1 48879 41.621 41.621 1 0.82696 0.65598 0 4512100 2463300 2048800 24499 1366 9238 9451 38399 38399 LVISHEEELIPLHK 14 1 0 Unmodified _LVISHEEELIPLHK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.6536 3 552.982162 1655.92466 81972.16 0.44528 0.00024623 0.19917 0.00011014 0.64444 0.00035637 553.316594990977 555.653662536312 88.373 0.52683 88.373 88.183 88.709 0 136 27 8 0 0 0 0.0001534 2 47862 60.401 60.401 1 0.80449 0.6436 0 4152300 2105400 2046800 24500 1366 9238 9451 38400;38401 38401 LVIVDGIAFPFR 12 0 1 Unmodified _LVIVDGIAFPFR_ 0 0 0 J3QLQ2;J3QR58;H7C1R0;B4E0G0;J3QKK3;O43502 J3QLQ2 J3QLQ2 RAD51C DNA repair protein RAD51 homolog 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.9003 2 673.89518 1345.77581 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.83 1 128.83 128.33 129.33 0 0 0 0 0.00022873 1 84032 83.783 43.738 1 24501 1062 9239 9452 38402 38402 LVIVGDGACGK 11 1 0 Unmodified _LVIVGDGACGK_ 0 0 0 B4DKN9;Q5JR08;A0A024R324;A0A024R0I3;P61586;P08134;Q5JR07;C9JNR4;E9PQH6;C9JX21;Q5JR05;E9PLA2;C9JRM1;Q5JR06;E9PN11;U3KQA9;U3KQV3 B4DKN9 B4DKN9 RHOC;RHOA;hCG_2043376 Transforming protein RhoA;Rho-related GTP-binding protein RhoC MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.2928 2 544.792066 1087.56958 81368.35 0.59977 0.00032675 -0.08429 -4.592E-05 0.51548 0.00028083 544.79189508836 548.799001830647 50.591 0.46463 50.591 50.353 50.817 3.8147E-06 165 44 5 0 0 0 0.0044695 2 27872 57.96 40.574 1 1.6568 1.846 0 61516000 22893000 38623000 24502 48 9240 9453 38403;38404 38404 LVIVGDGACGK 11 1 0 Unmodified _LVIVGDGACGK_ 0 0 0 B4DKN9;Q5JR08;A0A024R324;A0A024R0I3;P61586;P08134;Q5JR07;C9JNR4;E9PQH6;C9JX21;Q5JR05;E9PLA2;C9JRM1;Q5JR06;E9PN11;U3KQA9;U3KQV3 B4DKN9 B4DKN9 RHOC;RHOA;hCG_2043376 Transforming protein RhoA;Rho-related GTP-binding protein RhoC MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.7925 2 544.792066 1087.56958 80567.27 0.35902 0.00019559 -0.057371 -3.1255E-05 0.30164 0.00016433 544.792144214055 548.799080117937 49.426 0.63039 49.426 48.912 49.542 0 189 53 7 0 0 0 0.00018048 2 27728 93.649 76.263 1 1.8435 2.0262 0 42082000 16670000 25411000 24503 48 9240 9453 38405;38406 38405 LVIVGDGACGK 11 1 0 Unmodified _LVIVGDGACGK_ 0 0 0 B4DKN9;Q5JR08;A0A024R324;A0A024R0I3;P61586;P08134;Q5JR07;C9JNR4;E9PQH6;C9JX21;Q5JR05;E9PLA2;C9JRM1;Q5JR06;E9PN11;U3KQA9;U3KQV3 B4DKN9 B4DKN9 RHOC;RHOA;hCG_2043376 Transforming protein RhoA;Rho-related GTP-binding protein RhoC MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.7998 2 544.792066 1087.56958 83455.2 0.51611 0.00028117 -0.29386 -0.00016009 0.22224 0.00012108 544.791913987081 548.798786756877 58.038 0.50873 58.038 57.842 58.35 0 124 36 5 0 0 0 0.031594 1 28776 38.086 20.051 1 0.90023 0.70238 0 2111900 968100 1143800 24504 48 9240 9453 38407 38407 LVIVSLMELFK 11 1 0 Oxidation (M) _LVIVSLM(ox)ELFK_ LVIVSLM(1)ELFK LVIVSLM(47.19)ELFK 0 1 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.3947 2 654.3858 1306.75705 76392.69 0.74678 0.00048869 -0.1457 -9.5345E-05 0.60108 0.00039334 654.385502156904 658.392652255039 129.92 0.47015 129.92 129.77 130.24 0 118 33 6 0 0 0 0.0066641 1 86772 47.187 47.187 1 1.6977 1.6945 0 6522100 2457200 4064900 24505 780 9241 9454 38408 38408 609 LVLADLLEPVK 11 1 0 Unmodified _LVLADLLEPVK_ 0 0 0 Q9BVJ6;B4E343;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.3849 2 605.376289 1208.73803 78246.17 0.65976 0.0003994 0.026485 1.6033E-05 0.68625 0.00041544 605.376258980326 609.383257543554 122.24 0.87542 122.24 121.92 122.79 0 327 62 8 0 0 0 6.628E-08 2 78933 114.84 114.84 1 1.0649 1.2019 0 79534000 40906000 38628000 24506 2008 9242 9455 38409;38410 38409 LVLADLLEPVK 11 1 0 Unmodified _LVLADLLEPVK_ 0 0 0 Q9BVJ6;B4E343;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.377 2 605.376289 1208.73803 78449.15 0.5695 0.00034476 0.059725 3.6156E-05 0.62923 0.00038092 605.376304445343 609.383289828186 121.71 0.66531 121.71 121.41 122.08 0 312 48 8 0 0 0 7.642E-08 2 80446 113.22 113.22 1 1.0154 1.1344 0 90712000 46388000 44324000 24507 2008 9242 9455 38411;38412 38412 LVLADLLEPVK 11 1 0 Unmodified _LVLADLLEPVK_ 0 0 0 Q9BVJ6;B4E343;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.3774 2 605.376289 1208.73803 77154.35 1.0495 0.00063537 0.21249 0.00012864 1.262 0.00076401 605.376332411672 609.383446197789 134.4 0.48384 134.4 134.26 134.75 0 77 17 8 0 0 0 6.6214E-06 2 82024 110.14 110.14 1 1.4806 1.2156 0 37681000 16255000 21426000 24508 2008 9242 9455 38413;38414 38414 LVLADLLEPVK 11 1 0 Unmodified _LVLADLLEPVK_ 0 0 0 Q9BVJ6;B4E343;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.8784 2 605.376289 1208.73803 77954.19 0.92564 0.00056036 0.086559 5.2401E-05 1.0122 0.00061276 605.376345866347 609.383318669656 134.27 0.45547 134.27 134.1 134.56 0 102 20 9 0 0 0 0.00035027 2 80962 85.377 85.377 1 1.4916 1.2437 0 41340000 16708000 24633000 24509 2008 9242 9455 38415;38416 38415 LVLDEDEETKEPLVQVHR 18 1 1 Unmodified _LVLDEDEETKEPLVQVHR_ 0 0 1 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.0344 4 538.033842 2148.10626 81551.92 0.425 0.00022866 0.047073 2.5327E-05 0.47207 0.00025399 538.033962286453 542.789621024272 80.119 0.44368 80.119 79.87 80.313 0 135 26 8 0 0 0 0.058463 1 43280 9.4152 9.4152 1 1.5663 1.2924 0 5352100 1855800 3496300 24510 672 9243 9456 38417 38417 LVLDPYLLK 9 1 0 Unmodified _LVLDPYLLK_ 0 0 0 E9PE17;Q8IY71;I3L0E3;Q9Y2R5 E9PE17 E9PE17 MRPS17;hCG_1984214 28S ribosomal protein S17, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.3415 2 537.333893 1072.65323 NaN NaN NaN 0.18085 9.7176E-05 NaN NaN NaN NaN 109.84 0.45491 109.84 109.6 110.06 0 0 0 0 0.016025 1 68779 61.999 41.717 1 NaN NaN 0 6172900 0 6172900 24511 1232 9244 9457 38418 38418 LVLDPYLLK 9 1 0 Unmodified _LVLDPYLLK_ 0 0 0 E9PE17;Q8IY71;I3L0E3;Q9Y2R5 E9PE17 E9PE17 MRPS17;hCG_1984214 28S ribosomal protein S17, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.3409 2 537.333893 1072.65323 85655.78 0.74824 0.00040205 -0.060831 -3.2687E-05 0.68741 0.00036937 537.333839379809 541.340802814839 109.17 0.50779 109.17 108.9 109.4 -7.6294E-06 116 35 4 0 0 0 0.0056953 3 69983 66.073 61.499 1 1.1795 1.221 0 9775000 5022500 4752500 24512 1232 9244 9457 38419;38420;38421 38421 LVLDPYLLK 9 1 0 Unmodified _LVLDPYLLK_ 0 0 0 E9PE17;Q8IY71;I3L0E3;Q9Y2R5 E9PE17 E9PE17 MRPS17;hCG_1984214 28S ribosomal protein S17, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.3414 2 537.333893 1072.65323 84037.47 0.76225 0.00040958 0.17366 9.3312E-05 0.9359 0.00050289 537.333985324867 541.341018717521 120.99 0.3549 120.99 120.81 121.17 -7.6294E-06 52 16 5 0 0 0 0.047679 1 71917 38.962 36.126 1 1.2435 1.0542 0 1473000 610420 862530 24513 1232 9244 9457 38422 38422 LVLEMVHHNTASLEK 15 1 0 Oxidation (M) _LVLEM(ox)VHHNTASLEK_ LVLEM(1)VHHNTASLEK LVLEM(54.81)VHHNTASLEK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.3105 3 579.638178 1735.8927 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.265 1 40.265 39.765 40.765 3.8147E-06 0 0 0 0.00068566 1 21471 54.812 41.066 1 24514 2103 9245 9458 38423 38423 1930 LVLEMVHHNTASLEK 15 1 0 Unmodified _LVLEMVHHNTASLEK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.9783 3 574.30654 1719.89779 NaN NaN NaN -0.12204 -7.0089E-05 NaN NaN NaN NaN 68.417 0.74918 68.417 68.11 68.86 0 0 0 0 0.035234 1 35910 28.283 23.299 1 NaN NaN 0 2224100 0 2224100 24515 2103 9245 9459 38424 38424 LVLILNK 7 1 0 Unmodified _LVLILNK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 410.7911 2 406.783839 811.553125 95079.49 0.34105 0.00013873 -0.087983 -3.579E-05 0.25306 0.00010294 406.78369565857 410.790783476208 80.676 1.0137 80.676 80.143 81.157 0 351 85 6 0 0 0 0.0125 3 47810 105.42 40.088 1 0.81761 0.91167 0 61941000 34241000 27700000 24516 125 9246 9460 38425;38426;38427 38426 LVLILNK 7 1 0 Unmodified _LVLILNK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 406.783 2 406.783839 811.553125 94825.7 0.23617 9.6069E-05 -0.052711 -2.1442E-05 0.18346 7.4627E-05 406.783722144741 410.790807225481 79.447 1.0152 79.447 78.877 79.892 0 381 85 6 0 0 0 0.026968 3 48489 84.025 25.317 1 0.8111 0.913 0 70438000 39262000 31176000 24517 125 9246 9460 38428;38429;38430 38430 LVLILNK 7 1 0 Unmodified _LVLILNK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 406.7834 2 406.783839 811.553125 96579.81 -0.19799 -8.0538E-05 0.27827 0.00011319 0.080281 3.2657E-05 406.783830558377 410.790967333654 91.289 0.9839 91.289 90.917 91.901 0 254 65 6 0 0 0 0.052963 1 49777 53.71 16.064 1 1.1418 0.93016 0 12899000 6291600 6607200 24518 125 9246 9460 38431 38431 LVLLGESAVGK 11 1 0 Unmodified _LVLLGESAVGK_ 0 0 0 A0A024R1U4;P51148;F8VVK3;K7ERI8;K7ERQ8;F8WCY6;F8WD79;F8VPW9;F8VSF8;F8VWZ7;F8VWU4;F8VVZ0;F8VUA5;A0A0A1HAN9;A0A024RB09;P61020 A0A024R1U4 A0A024R1U4 RAB5C;RAB5A;RAB5B Ras-related protein Rab-5C;Ras-related protein Rab-5B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.332 2 543.331882 1084.64921 83142.52 0.85176 0.00046279 0.10708 5.8179E-05 0.95884 0.00052097 543.331790361163 547.33889665581 82.231 0.69968 82.231 81.899 82.599 0 264 60 6 0 0 0 0.00093586 2 49102 71.349 47.995 1 1.4081 1.4547 0 29107000 13987000 15120000 24519 92 9247 9461 38432;38433 38433 LVLLGESAVGK 11 1 0 Unmodified _LVLLGESAVGK_ 0 0 0 A0A024R1U4;P51148;F8VVK3;K7ERI8;K7ERQ8;F8WCY6;F8WD79;F8VPW9;F8VSF8;F8VWZ7;F8VWU4;F8VVZ0;F8VUA5;A0A0A1HAN9;A0A024RB09;P61020 A0A024R1U4 A0A024R1U4 RAB5C;RAB5A;RAB5B Ras-related protein Rab-5C;Ras-related protein Rab-5B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.339 2 543.331882 1084.64921 82989.2 0.72312 0.0003929 -0.048763 -2.6495E-05 0.67436 0.0003664 543.331793937148 547.338834794607 81.103 0.65707 81.103 80.803 81.46 -7.6294E-06 249 56 6 0 0 0 0.00093586 1 49447 71.349 40.662 1 1.3815 1.4925 0 38397000 15474000 22923000 24520 92 9247 9461 38434 38434 LVLMSATGDNER 12 0 1 Oxidation (M) _LVLM(ox)SATGDNER_ LVLM(1)SATGDNER LVLM(75.51)SATGDNER 0 1 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3264 2 661.324459 1320.63436 78475 0.80122 0.00052987 -1.1498 -0.00076038 -0.34857 -0.00023052 661.323379730175 666.327748972099 39.221 0.39333 39.221 39.068 39.461 0 59 29 4 0 0 0 8.9152E-05 1 20272 75.509 69.507 1 2.1869 2.2978 0 11629000 2766900 8861700 24521 122 9248 9462 38435 38435 106 LVLMSATGDNER 12 0 1 Oxidation (M) _LVLM(ox)SATGDNER_ LVLM(1)SATGDNER LVLM(61.16)SATGDNER 0 1 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.2933 2 661.324459 1320.63436 80405.54 0.57242 0.00037855 0.96046 0.00063518 1.5329 0.0010137 661.324683782738 666.329363428737 40.089 0.26007 40.089 39.896 40.156 0 56 20 4 0 0 0 0.010963 1 20917 61.161 61.161 1 1.2367 1.2504 0 9674300 3375400 6298900 24522 122 9248 9462 38436 38436 106 LVLMSATGDNER 12 0 1 Oxidation (M) _LVLM(ox)SATGDNER_ LVLM(1)SATGDNER LVLM(68.66)SATGDNER 0 1 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.3251 2 661.324459 1320.63436 75368.82 0.60407 0.00039949 0.75679 0.00050049 1.3609 0.00089998 661.325201311176 666.329327218194 39.105 0.25476 39.105 38.919 39.173 0 72 21 5 0 0 0 0.00028838 1 20631 68.657 60.125 1 1.0311 1.0177 0 14888000 5496600 9391300 24523 122 9248 9462 38437 38437 106 LVLMSATGDNER 12 0 1 Oxidation (M) _LVLM(ox)SATGDNER_ LVLM(1)SATGDNER LVLM(70.55)SATGDNER 0 1 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3293 2 661.324459 1320.63436 NaN NaN NaN -1.44 -0.00095228 NaN NaN NaN NaN 38.317 0.31799 38.317 38.09 38.408 0 0 0 0 0.00065278 1 20013 70.552 50.413 1 NaN NaN 0 10992000 0 10992000 24524 122 9248 9462 38438 38438 106 LVLPAPQISDAELQEVVK 18 1 0 Unmodified _LVLPAPQISDAELQEVVK_ 0 0 0 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.556 2 975.051323 1948.08809 63545.18 0.66509 0.0006485 -0.82819 -0.00080753 -0.1631 -0.00015903 975.04931771263 979.057551406689 120.7 0.34527 120.7 120.53 120.88 0 150 25 8 0 0 0 6.9004E-05 2 77823 52.265 52.265 1 0.9381 0.97227 0 14773000 7609200 7163500 24525 957 9249 9463 38439;38440 38440 LVLPAPQISDAELQEVVK 18 1 0 Unmodified _LVLPAPQISDAELQEVVK_ 0 0 0 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.0496 2 975.051323 1948.08809 64042.23 0.59574 0.00058087 -0.56309 -0.00054904 0.032649 3.1834E-05 975.050325838076 979.559323750189 120.26 0.33315 120.26 120.11 120.44 -7.6294E-06 143 23 8 0 0 0 6.4114E-05 2 79383 53.754 53.754 1 1.0264 1.0834 0 20009000 10675000 9334100 24526 957 9249 9463 38441;38442 38442 LVLPAPQISDAELQEVVK 18 1 0 Unmodified _LVLPAPQISDAELQEVVK_ 0 0 0 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 979.0582 2 975.051323 1948.08809 63100.22 0.28071 0.0002737 0.32382 0.00031574 0.60453 0.00058944 975.051803131964 979.058522052003 133.51 0.37076 133.51 133.3 133.67 0 79 15 7 0 0 0 0.0031149 2 81280 35.204 35.204 1 1.3693 1.0858 0 4360200 2023800 2336400 24527 957 9249 9463 38443;38444 38443 LVLPAPQISDAELQEVVK 18 1 0 Unmodified _LVLPAPQISDAELQEVVK_ 0 0 0 B4DSH1;B3KY60;Q99459 B4DSH1 B4DSH1 CDC5L Cell division cycle 5-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 975.554 2 975.051323 1948.08809 63491.37 0.61909 0.00060364 -0.17894 -0.00017447 0.44015 0.00042917 975.553173828852 979.058343168331 133.23 0.35507 133.23 133.09 133.44 0 70 13 8 0 0 0 0.015605 1 80240 24.558 24.558 1 1.1553 0.93781 0 4428300 1979800 2448500 24528 957 9249 9463 38445 38445 LVLPPPDPLDLPLR 14 0 1 Unmodified _LVLPPPDPLDLPLR_ 0 0 0 B4DSY1;Q9NPK3;Q96BC0;O76046;Q15477;A0A024RCU1;F8WDE8;B4DF09;B4E0B4 B4DSY1 B4DSY1 SKIV2L;SKI2W Helicase SKI2W MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.971 2 777.966334 1553.91811 71187.89 0.88526 0.0006887 0.39435 0.00030679 1.2796 0.00099549 778.467693399418 782.971228527976 127.86 0.60073 127.86 127.54 128.14 -7.6294E-06 116 37 5 0 0 0 0.00036505 1 83410 61.353 61.353 1 2.0052 2.1028 0 4356200 1545900 2810300 24529 1031 9250 9464 38446 38446 LVLPPPDPLDLPLR 14 0 1 Unmodified _LVLPPPDPLDLPLR_ 0 0 0 B4DSY1;Q9NPK3;Q96BC0;O76046;Q15477;A0A024RCU1;F8WDE8;B4DF09;B4E0B4 B4DSY1 B4DSY1 SKIV2L;SKI2W Helicase SKI2W MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.9668 2 777.966334 1553.91811 70999.71 0.85821 0.00066766 -0.084391 -6.5654E-05 0.77382 0.00060201 777.965396821022 782.971006674776 127.53 0.49791 127.53 127.22 127.72 0 118 29 6 0 0 0 0.0017522 3 85144 51.445 51.445 1 2.1915 2.2125 0 5706700 1894700 3812000 24530 1031 9250 9464 38447;38448;38449 38447 LVLPSNTPNVR 11 0 1 Unmodified _LVLPSNTPNVR_ 0 0 0 Q03188;H0Y8J2;H0Y9W1 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.3546 2 605.351137 1208.68772 77752.18 0.63391 0.00038374 0.55079 0.00033342 1.1847 0.00071716 605.351703021425 610.354645460052 69.233 0.93851 69.233 68.657 69.595 0 283 80 7 0 0 0 0.00041576 1 40166 80.239 39.21 1 0.55894 0.60266 0 48071000 31210000 16861000 24531 1681 9251 9465 38450 38450 LVLPSNTPNVR 11 0 1 Unmodified _LVLPSNTPNVR_ 0 0 0 Q03188;H0Y8J2;H0Y9W1 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.3555 2 605.351137 1208.68772 78020.08 0.52147 0.00031567 0.10622 6.4298E-05 0.62769 0.00037997 605.351159973729 610.355217258805 68.046 0.50121 68.046 67.863 68.364 0 189 40 6 0 0 0 0.00041576 2 40331 80.239 41.091 1 0.5932 0.67137 0 47776000 30119000 17657000 24532 1681 9251 9465 38451;38452 38451 LVLPSNTPNVR 11 0 1 Unmodified _LVLPSNTPNVR_ 0 0 0 Q03188;H0Y8J2;H0Y9W1 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.3549 2 605.351137 1208.68772 77697.32 0.44587 0.00026991 -0.43207 -0.00026155 0.013798 8.3528E-06 605.350795952421 610.354889206843 79.335 0.62992 79.335 79.087 79.717 0 185 38 6 0 0 0 0.00041576 2 42683 80.239 39.21 1 1.1925 1.0256 0 6879700 2979700 3899900 24533 1681 9251 9465 38453;38454 38453 LVLPSNTPNVR 11 0 1 Unmodified _LVLPSNTPNVR_ 0 0 0 Q03188;H0Y8J2;H0Y9W1 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.3541 2 605.351137 1208.68772 78286.59 0.40514 0.00024525 -0.38992 -0.00023604 0.015217 9.2119E-06 605.350765366986 610.354976594584 79.53 0.60738 79.53 79.276 79.883 0 186 37 6 0 0 0 0.0014303 2 41963 67.563 39.164 1 1.1659 0.96727 0 5293200 2539500 2753700 24534 1681 9251 9465 38455;38456 38455 LVLSFDEEK 9 1 0 Unmodified _LVLSFDEEK_ 0 0 0 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1;B3KQ09 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.2858 2 540.284597 1078.55464 82456.93 0.86811 0.00046903 -0.14242 -7.6947E-05 0.72569 0.00039208 540.284478663713 544.291587427135 80.116 0.71494 80.116 79.825 80.54 0 261 59 6 0 0 0 0.00028235 2 47518 103.56 76.961 1 0.81588 0.91594 0 67819000 30539000 37280000 24535 80 9252 9466 38457;38458 38458 LVLSFDEEK 9 1 0 Unmodified _LVLSFDEEK_ 0 0 0 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1;B3KQ09 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.2914 2 540.284597 1078.55464 82614.04 0.68006 0.00036743 0.22236 0.00012014 0.90242 0.00048756 540.284593055334 544.291780584201 78.968 0.79152 78.968 78.699 79.491 0 326 68 8 0 0 0 0.0096208 2 47838 60.019 42.634 1 0.8052 0.90663 0 57737000 29881000 27856000 24536 80 9252 9466 38459;38460 38459 LVLSFDEEK 9 1 0 Unmodified _LVLSFDEEK_ 0 0 0 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1;B3KQ09 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.2905 2 540.284597 1078.55464 81176.72 0.51479 0.00027814 -0.17606 -9.512E-05 0.33874 0.00018302 540.284476732005 544.291647670453 91.21 0.87889 91.21 90.81 91.689 0 261 59 6 0 0 0 0.039611 2 49687 42.19 24.805 1 1.1772 0.95824 0 7240600 3594300 3646300 24537 80 9252 9466 38461;38462 38461 LVLSLQPIPLK 11 1 0 Unmodified _LVLSLQPIPLK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK4 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.9097 2 610.902474 1219.7904 77925.91 0.77182 0.00047151 -0.16607 -0.00010145 0.60576 0.00037006 610.902250265238 614.909452860239 116.94 0.59549 116.94 116.68 117.28 7.6294E-06 232 43 8 0 0 0 0.00018048 2 74667 93.649 93.649 1 0.56754 0.61713 0 47807000 29329000 18478000 24538 118 9253 9467 38463;38464 38464 LVLSLQPIPLK 11 1 0 Unmodified _LVLSLQPIPLK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK4 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.9102 2 610.902474 1219.7904 77808.95 0.57061 0.00034859 0.19926 0.00012173 0.76987 0.00047031 610.902457196454 614.909644298197 116.33 0.64524 116.33 116.13 116.77 0 203 41 8 0 0 0 2.5928E-05 2 76036 102.61 102.61 1 0.55396 0.62406 0 59156000 37049000 22107000 24539 118 9253 9467 38465;38466 38466 LVLSLQPIPLK 11 1 0 Unmodified _LVLSLQPIPLK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK4 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.9101 2 610.902474 1219.7904 77639.16 0.70467 0.00043048 -0.014024 -8.567E-06 0.69065 0.00042192 610.902372049634 614.909461050441 128.93 0.64432 128.93 128.69 129.34 -1.5259E-05 170 30 8 0 0 0 0.0003024 2 77907 88.37 88.37 1 0.89419 0.69547 0 15442000 7781800 7660600 24540 118 9253 9467 38467;38468 38468 LVLSLQPIPLK 11 1 0 Unmodified _LVLSLQPIPLK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK4 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.9103 2 610.902474 1219.7904 77802.3 0.75982 0.00046418 0.10341 6.3171E-05 0.86323 0.00052735 610.902461872689 614.909523204839 128.77 0.60393 128.77 128.45 129.05 0 139 23 8 0 0 0 1.6603E-12 2 76804 143.28 143.28 1 0.90658 0.74056 0 26319000 14362000 11957000 24541 118 9253 9467 38469;38470 38470 LVLSTLSGR 9 0 1 Unmodified _LVLSTLSGR_ 0 0 0 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2904 2 473.290017 944.565481 90072.89 0.067834 3.2105E-05 0.31021 0.00014682 0.37805 0.00017893 473.290055231475 478.294152366512 66.798 0.65342 66.798 66.529 67.182 0 150 47 4 0 0 0 0.0089883 1 38539 60.59 45.209 1 0.79876 0.83563 0 12907000 6903800 6003400 24542 2125 9254 9468 38471 38471 LVLSTLSGRPVK 12 1 1 Unmodified _LVLSTLSGRPVK_ 0 0 1 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 429.9417 3 423.934484 1268.78162 92106.49 0.034088 1.4451E-05 0.014067 5.9636E-06 0.048156 2.0415E-05 423.934293118823 429.94189231048 59.265 0.53493 59.265 58.994 59.529 -3.8147E-06 191 40 8 0 0 0 0.00034412 2 33693 71.555 64.508 1 0.84608 1.0165 0 72484000 35920000 36564000 24543 2125 9255 9469 38472;38473 38473 LVLSTLSGRPVK 12 1 1 Unmodified _LVLSTLSGRPVK_ 0 0 1 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.4091 2 635.398087 1268.78162 77235.71 0.56164 0.00035686 -0.063054 -4.0064E-05 0.49858 0.0003168 635.398037101638 644.409314193996 59.264 0.3264 59.264 59.109 59.436 0 88 25 5 0 0 0 0.0022295 1 33709 71.349 66.737 1 0.99771 1.0684 0 13371000 6559900 6811100 24544 2125 9255 9469 38474 38474 LVLSTLSGRPVK 12 1 1 Unmodified _LVLSTLSGRPVK_ 0 0 1 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.9344 3 423.934484 1268.78162 91294.36 -0.12094 -5.127E-05 0.20024 8.4888E-05 0.079299 3.3617E-05 423.93439826824 429.942001971119 57.972 0.55688 57.972 57.731 58.288 3.8147E-06 218 43 7 0 0 0 0.00045669 2 33535 58.172 55.398 1 0.88208 1.0376 0 74672000 38345000 36327000 24545 2125 9255 9469 38475;38476 38476 LVLSTLSGRPVK 12 1 1 Unmodified _LVLSTLSGRPVK_ 0 0 1 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.4096 2 635.398087 1268.78162 77155.02 0.50418 0.00032035 0.012206 7.756E-06 0.51638 0.00032811 635.397742634944 644.409327012649 57.957 0.33828 57.957 57.791 58.129 0 108 28 6 0 0 0 0.0044138 1 33545 65.347 61.799 1 1.0009 1.1299 0 14925000 8228600 6696400 24546 2125 9255 9469 38477 38477 LVLSTLSGRPVK 12 1 1 Unmodified _LVLSTLSGRPVK_ 0 0 1 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 423.9346 3 423.934484 1268.78162 92299.2 -0.33195 -0.00014072 0.44936 0.0001905 0.11741 4.9774E-05 423.934649694125 429.942109958073 68.837 0.44372 68.837 68.661 69.105 0 175 31 8 0 0 0 0.0068549 2 35999 41.242 41.242 1 1.2787 1.105 0 14021000 5807000 8213600 24547 2125 9255 9469 38478;38479 38479 LVLSTLSGRPVK 12 1 1 Unmodified _LVLSTLSGRPVK_ 0 0 1 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.3985 2 635.398087 1268.78162 76338.17 0.4606 0.00029267 0.17631 0.00011203 0.63691 0.00040469 635.398173664973 644.409330717668 68.831 0.38472 68.831 68.661 69.046 0 134 27 6 0 0 0 0.034152 1 36008 49.3 49.3 1 1.3443 1.1301 0 7144800 3427000 3717800 24548 2125 9255 9469 38480 38480 LVLSTLSGRPVK 12 1 1 Unmodified _LVLSTLSGRPVK_ 0 0 1 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 429.9417 3 423.934484 1268.78162 91611.55 -0.3822 -0.00016203 0.24926 0.00010567 -0.13294 -5.6357E-05 423.934563550443 429.941994755869 69.17 0.50292 69.17 68.958 69.461 0 154 34 6 0 0 0 0.026897 2 35368 23.828 23.676 1 1.3564 1.1475 0 11073000 4999000 6073900 24549 2125 9255 9469 38481;38482 38481 LVLSTLSGRPVK 12 1 1 Unmodified _LVLSTLSGRPVK_ 0 0 1 Q9Y2P8;Q5VYW8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.811 2 635.398087 1268.78162 77601.11 0.57424 0.00036487 -0.076593 -4.8667E-05 0.49765 0.00031621 635.39799235293 644.409235208534 69.161 0.41589 69.161 68.969 69.385 -7.6294E-06 122 28 6 0 0 0 0.011328 1 35399 60.434 60.434 1 1.3732 1.1508 0 5405800 2256100 3149700 24550 2125 9255 9469 38483 38483 LVLVGDGGTGK 11 1 0 Unmodified _LVLVGDGGTGK_ 0 0 0 B5MDF5;P62826;J3KQE5;H0YFC6;Q96QB7;Q0EFC9 B5MDF5 B5MDF5 RAN;TC4 GTP-binding nuclear protein Ran MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2998 2 508.292756 1014.57096 84925.69 0.49274 0.00025046 -0.073532 -3.7376E-05 0.41921 0.00021308 508.292749375938 512.299724592636 51.736 1.1439 51.736 51.464 52.608 3.8147E-06 441 90 8 0 0 0 9.0028E-05 2 28543 97.565 32.912 1 2.2866 2.6774 0 290040000 88246000 201790000 24551 1082 9256 9470 38484;38485 38484 LVLVGDGGTGK 11 1 0 Unmodified _LVLVGDGGTGK_ 0 0 0 B5MDF5;P62826;J3KQE5;H0YFC6;Q96QB7;Q0EFC9 B5MDF5 B5MDF5 RAN;TC4 GTP-binding nuclear protein Ran MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.3009 2 508.292756 1014.57096 85241.73 0.48007 0.00024401 -0.16431 -8.3517E-05 0.31576 0.0001605 508.292677986703 512.299680831323 50.54 0.96862 50.54 50.26 51.228 0 366 83 8 0 0 0 5.7131E-08 2 28430 116.3 27.357 1 2.1902 2.5484 0 239880000 73800000 166080000 24552 1082 9256 9470 38486;38487 38486 LVLVGDGGTGK 11 1 0 Unmodified _LVLVGDGGTGK_ 0 0 0 B5MDF5;P62826;J3KQE5;H0YFC6;Q96QB7;Q0EFC9 B5MDF5 B5MDF5 RAN;TC4 GTP-binding nuclear protein Ran MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 508.2929 2 508.292756 1014.57096 85543.98 0.32486 0.00016512 -0.021495 -1.0926E-05 0.30336 0.0001542 508.292705949323 512.299753181678 58.85 0.99511 58.85 58.532 59.527 0 340 76 8 0 0 0 0.001099 2 29941 70.1 16.773 1 1.2737 1.0339 0 26988000 11428000 15560000 24553 1082 9256 9470 38488;38489 38489 LVLVGDGGTGK 11 1 0 Unmodified _LVLVGDGGTGK_ 0 0 0 B5MDF5;P62826;J3KQE5;H0YFC6;Q96QB7;Q0EFC9 B5MDF5 B5MDF5 RAN;TC4 GTP-binding nuclear protein Ran MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.2999 2 508.292756 1014.57096 84663.42 0.3102 0.00015767 0.19959 0.00010145 0.50979 0.00025912 508.292832057826 512.299872733824 59.229 1.0409 59.229 58.928 59.969 0 378 79 8 0 0 0 0.00081497 1 29452 72.275 20.747 1 1.2698 1.0214 0 22623000 9798400 12824000 24554 1082 9256 9470 38490 38490 LVLVLNK 7 1 0 Unmodified _LVLVLNK_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.7762 2 399.776014 797.537475 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.965 1 72.965 72.465 73.465 0 0 0 0 0.035667 1 42797 71.359 30.674 1 24555 291 9257 9471 38491 38491 LVMEEAPESYK 11 1 0 Oxidation (M) _LVM(ox)EEAPESYK_ LVM(1)EEAPESYK LVM(89.05)EEAPESYK 0 1 0 Q9Y3I0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.3107 2 656.310486 1310.60642 75265.05 0.83965 0.00055107 0.11838 7.7695E-05 0.95803 0.00062877 656.310532560156 660.317746927708 37.095 0.48742 37.095 36.849 37.336 0 171 43 6 0 0 0 0.00013892 2 18853 89.047 77.883 1 1.8295 1.9725 0 41384000 16826000 24558000 24556 2137 9258 9472 38492;38493 38493 1977 LVMEEAPESYK 11 1 0 Oxidation (M) _LVM(ox)EEAPESYK_ LVM(1)EEAPESYK LVM(93.11)EEAPESYK 0 1 0 Q9Y3I0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3179 2 656.310486 1310.60642 75537.31 0.8174 0.00053647 0.10678 7.0079E-05 0.92417 0.00060655 656.310477347295 660.317764982361 36.163 0.44431 36.163 36.002 36.446 -3.8147E-06 151 38 6 0 0 0 9.346E-05 1 18497 93.111 78.904 1 1.4905 1.6505 0 46111000 18073000 28037000 24557 2137 9258 9472 38494 38494 1977 LVNELTEFAK 10 1 0 Unmodified _LVNELTEFAK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.3187 2 582.318971 1162.62339 NaN NaN NaN -0.14402 -8.3863E-05 NaN NaN NaN NaN 83.641 0.57587 83.641 83.463 84.038 7.6294E-06 0 0 0 2.3739E-05 1 51283 103.55 93.316 1 NaN NaN 0 19785000 19785000 0 + 24558 1153 9259 9473 38495 38495 LVNELTEFAK 10 1 0 Unmodified _LVNELTEFAK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.3193 2 582.318971 1162.62339 NaN NaN NaN -0.016058 -9.351E-06 NaN NaN NaN NaN 97.141 0.82943 97.141 96.818 97.647 -7.6294E-06 0 0 0 0.0039971 1 54535 74.376 65.162 1 NaN NaN 0 3904300 3904300 0 + 24559 1153 9259 9473 38496 38496 LVNELTEFAK 10 1 0 Unmodified _LVNELTEFAK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.3194 2 582.318971 1162.62339 NaN NaN NaN 0.33157 0.00019308 NaN NaN NaN NaN 96.951 0.74673 96.951 96.699 97.446 -7.6294E-06 0 0 0 0.010114 1 53667 63.216 43.513 1 NaN NaN 0 3149900 3149900 0 + 24560 1153 9259 9473 38497 38497 LVNELTEK 8 1 0 Unmodified _LVNELTEK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.2669 2 473.266207 944.517862 90638.65 0.087891 4.1596E-05 -0.27575 -0.0001305 -0.18786 -8.8909E-05 473.266048157697 477.273206930376 40.985 0.50507 40.985 40.711 41.216 0 111 39 5 0 0 0 0.045643 1 18939 45.335 20.413 1 0.33574 0.28339 0 2098900 1598700 500190 24561 197 9260 9474 38498 38498 LVNELTEK 8 1 0 Unmodified _LVNELTEK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.2662 2 473.266207 944.517862 NaN NaN NaN -0.33353 -0.00015785 NaN NaN NaN NaN 41.068 0.45643 41.068 40.825 41.282 0 0 0 0 0.043729 1 18440 52.403 16.523 1 NaN NaN 0 1087600 1087600 0 24562 197 9260 9474 38499 38499 LVNHFVEEFK 10 1 0 Unmodified _LVNHFVEEFK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.8953 3 421.224034 1260.65027 92375.39 -0.0043745 -1.8427E-06 0.090639 3.8179E-05 0.086265 3.6337E-05 421.223993165563 423.895335495224 66.941 1.2649 66.941 66.494 67.759 0 516 100 8 0 0 0 0.0055601 2 38472 39.917 27.341 1 0.79494 0.89296 0 68941000 41537000 27404000 24563 533 9261 9475 38500;38501 38500 LVNHFVEEFK 10 1 0 Unmodified _LVNHFVEEFK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.224 3 421.224034 1260.65027 92731.61 0.084323 3.5519E-05 0.23661 9.9666E-05 0.32093 0.00013518 421.224003646405 423.895396045458 64.041 1.4589 64.041 63.589 65.048 0 700 132 9 0 0 0 0.028946 2 37529 24.696 20.449 1 0.86503 0.96947 0 112320000 63501000 48816000 24564 533 9261 9475 38502;38503 38502 LVNHFVEEFK 10 1 0 Unmodified _LVNHFVEEFK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3321 2 631.332413 1260.65027 77179.91 0.58406 0.00036873 0.37265 0.00023526 0.95671 0.000604 631.332190555372 635.339905119194 64.051 0.95741 64.051 63.743 64.701 0 308 89 5 0 0 0 0.019099 1 37766 47.187 47.187 1 1.0194 1.0331 0 29373000 16468000 12905000 24565 533 9261 9475 38504 38504 LVNLQHLDLLNNK 13 1 0 Unmodified _LVNLQHLDLLNNK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.6345 3 511.963102 1532.86748 84712.77 0.51672 0.00026454 -0.088421 -4.5268E-05 0.4283 0.00021927 511.963003486777 514.634394398599 94.473 0.83411 94.473 94.106 94.94 0 450 76 8 0 0 0 4.4167E-19 2 57221 112.44 112.44 1 0.8935 1.02 0 178670000 90372000 88296000 24566 1958 9262 9476 38505;38506 38505 LVNLQHLDLLNNK 13 1 0 Unmodified _LVNLQHLDLLNNK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.9629 3 511.963102 1532.86748 83865.14 0.55276 0.00028299 -0.17191 -8.8012E-05 0.38085 0.00019498 511.962981710433 514.634399145419 93.197 0.77715 93.197 92.909 93.686 0 390 69 8 0 0 0 4.2117E-06 2 57740 89.507 89.507 1 0.9103 1.0442 0 167610000 95715000 71892000 24567 1958 9262 9476 38507;38508 38508 LVNLQHLDLLNNK 13 1 0 Unmodified _LVNLQHLDLLNNK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.4419 2 767.441015 1532.86748 71806.4 0.78574 0.00060301 -0.25469 -0.00019546 0.53104 0.00040755 767.440766430195 771.447893781249 93.231 0.44556 93.231 93.048 93.494 0 162 39 6 0 0 0 6.0704E-06 1 57804 105.03 105.03 1 0.89096 0.95596 0 21376000 10258000 11118000 24568 1958 9262 9476 38509 38509 LVNLQHLDLLNNK 13 1 0 Unmodified _LVNLQHLDLLNNK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.9633 3 511.963102 1532.86748 84931.7 0.58316 0.00029856 0.066591 3.4092E-05 0.64975 0.00033265 511.963072231964 514.634457960077 107.34 0.79305 107.34 107.06 107.86 7.6294E-06 240 45 8 0 0 0 0.0027385 2 61415 36.938 36.938 1 0.71492 0.58128 0 29360000 16888000 12472000 24569 1958 9262 9476 38510;38511 38510 LVNLQHLDLLNNK 13 1 0 Unmodified _LVNLQHLDLLNNK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.4416 2 767.441015 1532.86748 70720 0.74323 0.00057038 -0.44491 -0.00034144 0.29832 0.00022894 767.440556897926 771.447655587271 107.32 0.5865 107.32 107.08 107.66 0 136 34 6 0 0 0 0.012509 1 61555 39.341 33.496 1 0.74791 0.59262 0 10339000 5768200 4570600 24570 1958 9262 9476 38512 38512 LVNLQHLDLLNNK 13 1 0 Unmodified _LVNLQHLDLLNNK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.6348 3 511.963102 1532.86748 83907.53 0.43348 0.00022193 -0.013587 -6.9562E-06 0.41989 0.00021497 511.963065750871 514.634409976572 106.95 0.60956 106.95 106.81 107.42 0 237 38 8 0 0 0 2.8939E-09 3 60329 98.368 98.368 1 0.72462 0.60571 0 43933000 24395000 19537000 24571 1958 9262 9476 38513;38514;38515 38513 LVNPSQYR 8 0 1 Unmodified _LVNPSQYR_ 0 0 0 A0A024RD30;Q9BX10;H0Y7A5 A0A024RD30 A0A024RD30 GTPBP2 GTP-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.7687 2 488.764166 975.513779 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.143 1 35.143 34.643 35.643 0 0 0 0 0.023811 1 17639 65.88 34.806 1 24572 377 9263 9477 38516 38516 LVNQQLLADPLVPPQLTIK 19 1 0 Unmodified _LVNQQLLADPLVPPQLTIK_ 0 0 0 B4DJ81;E5KRK5;P28331;Q9P1A0 B4DJ81 B4DJ81 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1054.6313 2 1050.62499 2099.23543 61972.38 0.90562 0.00095147 -0.33416 -0.00035107 0.57146 0.00060039 1050.62517836447 1055.1330246319 125.36 0.33148 125.36 125.18 125.51 0 67 21 5 0 0 0 0.0097226 1 81439 26.541 26.541 1 2.1672 2.1787 0 5226000 1853400 3372600 24573 986 9264 9478 38517 38517 LVNTINPGAR 10 0 1 Unmodified _LVNTINPGAR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;B3KY55;Q6ZUC8 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.8082 2 527.803823 1053.59309 83442.2 0.7135 0.00037659 0.032571 1.7191E-05 0.74607 0.00039378 527.803470417331 532.807894580631 38.842 0.46593 38.842 38.591 39.056 0 125 38 5 0 0 0 0.0005437 1 19958 85.161 72.573 1 3.268 3.3734 0 20020000 5806700 14213000 24574 231 9265 9479 38518 38518 LVPDLLAIVQR 11 0 1 Unmodified _LVPDLLAIVQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.892 2 618.887355 1235.76016 76737.04 0.80517 0.00049831 0.010013 6.197E-06 0.81519 0.00050451 618.887331119024 623.89137778933 123.41 0.94221 123.41 123.11 124.05 -7.6294E-06 386 69 9 0 0 0 0.00039848 2 79898 81.594 70.765 1 0.90939 1.0352 0 114970000 60505000 54464000 24575 897 9266 9480 38519;38520 38520 LVPDLLAIVQR 11 0 1 Unmodified _LVPDLLAIVQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.8918 2 618.887355 1235.76016 76730.19 0.90494 0.00056006 0.16777 0.00010383 1.0727 0.00066388 618.887487183709 623.891452436903 122.97 1.0761 122.97 122.59 123.67 -7.6294E-06 439 81 10 0 0 0 1.7782E-05 2 81424 105.78 92.808 1 0.95141 1.1024 0 291450000 157350000 134100000 24576 897 9266 9480 38521;38522 38522 LVPDLLAIVQR 11 0 1 Unmodified _LVPDLLAIVQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 623.892 2 618.887355 1235.76016 NaN NaN NaN 0.17892 0.00011073 NaN NaN NaN NaN 134.68 0.2438 134.68 134.56 134.8 0 0 0 0 0.0030465 1 82345 68.735 54.528 1 NaN NaN 0 21199000 0 21199000 24577 897 9266 9480 38523 38523 LVPDLLAIVQR 11 0 1 Unmodified _LVPDLLAIVQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.8917 2 618.887355 1235.76016 77389.31 0.71266 0.00044106 0.84828 0.00052499 1.5609 0.00096605 618.888155166203 623.891772976192 134.6 0.2565 134.6 134.5 134.76 0 33 6 7 0 0 0 0.00013769 3 81363 95.502 84.672 1 1.4905 1.3002 0 28965000 12015000 16950000 24578 897 9266 9480 38524;38525;38526 38525 LVPEEETTASENTEITSER 19 0 1 Unmodified _LVPEEETTASENTEITSER_ 0 0 0 Q96T23;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1069.0049 2 1068.00295 2133.99135 58900.34 0.35156 0.00037546 -0.19205 -0.00020511 0.1595 0.00017035 1068.50390450978 1073.50849569857 59.281 0.50768 59.281 58.984 59.492 -3.8147E-06 231 38 8 0 0 0 0.0044022 1 33586 32.624 32.624 1 0.46946 0.48071 0 26165000 17746000 8418800 24579 1991 9267 9481 38527 38527 LVPEEETTASENTEITSER 19 0 1 Unmodified _LVPEEETTASENTEITSER_ 0 0 0 Q96T23;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1068.0028 2 1068.00295 2133.99135 60135.79 0.63973 0.00068323 -0.25567 -0.00027306 0.38405 0.00041017 1068.50422200954 1073.00684337116 58.571 0.59308 58.571 58.288 58.881 0 180 52 6 0 0 0 9.678E-06 2 33922 73.887 69.32 1 0.49552 0.54169 0 35852000 19662000 16189000 24580 1991 9267 9481 38528;38529 38528 LVPEEETTASENTEITSER 19 0 1 Unmodified _LVPEEETTASENTEITSER_ 0 0 0 Q96T23;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1073.5089 2 1068.00295 2133.99135 59018.78 -0.03911 -4.1769E-05 0.14975 0.00015993 0.11064 0.00011816 1068.50446859704 1073.00726769974 69.383 0.51432 69.383 69.132 69.647 0 195 35 8 0 0 0 0.00016591 2 36529 46.964 44.178 1 0.86699 0.74123 0 8750300 4308600 4441600 24581 1991 9267 9481 38530;38531 38531 LVPEEETTASENTEITSER 19 0 1 Unmodified _LVPEEETTASENTEITSER_ 0 0 0 Q96T23;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1073.5051 2 1068.00295 2133.99135 60012.93 -0.092853 -9.9168E-05 0.17545 0.00018738 0.082596 8.8212E-05 1068.50468770015 1073.00699229275 70.116 0.53641 70.116 69.803 70.339 0 246 45 7 0 0 0 0.00058715 1 35935 38.189 38.189 1 0.89147 0.74303 0 6383400 2908200 3475200 24582 1991 9267 9481 38532 38532 LVPEEVTSTVTK 12 1 0 Unmodified _LVPEEVTSTVTK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8609 2 651.8612 1301.70785 76179.66 0.50529 0.00032938 0.057025 3.7172E-05 0.56231 0.00036655 651.86110297998 655.86817256585 65.241 0.77669 65.241 64.825 65.602 0 302 69 6 0 0 0 0.00090263 1 37521 64.103 64.103 1 0.64825 0.65882 0 27893000 15157000 12736000 24583 1681 9268 9482 38533 38533 LVPEEVTSTVTK 12 1 0 Unmodified _LVPEEVTSTVTK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8614 2 651.8612 1301.70785 75703.54 0.7056 0.00045995 0.097072 6.3278E-05 0.80267 0.00052323 651.861243352902 655.868216854739 64.116 0.65538 64.116 63.774 64.429 0 290 60 7 0 0 0 0.00082335 1 37685 65.278 65.278 1 0.64227 0.66831 0 33815000 21109000 12705000 24584 1681 9268 9482 38534 38534 LVPEEVTSTVTK 12 1 0 Unmodified _LVPEEVTSTVTK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.8609 2 651.8612 1301.70785 75456.31 0.79524 0.00051838 0.26065 0.00016991 1.0559 0.00068829 651.860944684787 655.868578518725 74.922 1.0262 74.922 74.536 75.562 0 284 74 7 0 0 0 0.0022514 1 39729 59.067 59.067 1 1.1439 0.91496 0 8803900 4053600 4750300 24585 1681 9268 9482 38535 38535 LVPEEVTSTVTK 12 1 0 Unmodified _LVPEEVTSTVTK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.8615 2 651.8612 1301.70785 76390.02 0.50182 0.00032712 0.70072 0.00045677 1.2025 0.00078389 651.861442183888 655.868612216461 75.25 0.74966 75.25 75.016 75.766 7.6294E-06 283 54 8 0 0 0 0.0063345 2 39145 49.3 49.3 1 1.252 1.0212 0 7801800 3417100 4384700 24586 1681 9268 9482 38536;38537 38537 LVPFLWLK 8 1 0 Unmodified _LVPFLWLK_ 0 0 0 A0A024RCP3;Q12899 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.3198 2 508.320589 1014.62662 88341.02 0.59341 0.00030164 -0.74605 -0.00037923 -0.15265 -7.7593E-05 508.319617244518 512.32782742036 123.93 0.46497 123.93 123.73 124.19 0 99 31 5 0 0 0 0.014565 1 82363 62.714 62.714 1 0.55665 0.60064 0 3664000 2568200 1095800 24587 365 9269 9483 38538 38538 LVPGGGATEIELAK 14 1 0 Unmodified _LVPGGGATEIELAK_ 0 0 0 Q7Z759;Q53HU0;P50990 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.8901 2 677.882467 1353.75038 74220.26 0.36506 0.00024747 0.26625 0.00018049 0.63131 0.00042795 678.384402617595 681.889644727887 77.346 0.5455 77.346 77.047 77.592 0 186 45 5 0 0 0 0.002672 3 45579 48.44 34.848 1 3.9599 3.9099 0 25303000 5730800 19572000 24588 1592 9270 9484 38539;38540;38541 38539 LVPGGGATEIELAK 14 1 0 Unmodified _LVPGGGATEIELAK_ 0 0 0 Q7Z759;Q53HU0;P50990 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.8894 2 677.882467 1353.75038 75477.66 0.21711 0.00014717 0.42333 0.00028697 0.64044 0.00043414 677.883024970704 681.889770340273 76.315 0.50923 76.315 76.066 76.575 0 180 42 6 0 0 0 3.6418E-06 1 45984 101.93 70.507 1 4.0833 4.1396 0 29477000 6996100 22481000 24589 1592 9270 9484 38542 38542 LVPGLQDSEEK 11 1 0 Unmodified _LVPGLQDSEEK_ 0 0 0 Q9BSM1 Q9BSM1 Q9BSM1 PCGF1 Polycomb group RING finger protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.8171 2 607.816793 1213.61903 NaN NaN NaN 0.43757 0.00026596 NaN NaN NaN NaN 50.243 0.45572 50.243 50.087 50.543 0 0 0 0 0.01936 1 27756 53.327 35.941 1 NaN NaN 0 10780000 10780000 0 24590 2001 9271 9485 38543 38543 LVPGLQDSEEK 11 1 0 Unmodified _LVPGLQDSEEK_ 0 0 0 Q9BSM1 Q9BSM1 Q9BSM1 PCGF1 Polycomb group RING finger protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.8176 2 607.816793 1213.61903 NaN NaN NaN 0.98402 0.0005981 NaN NaN NaN NaN 49.083 0.49287 49.083 48.857 49.35 -3.8147E-06 0 0 0 0.0026408 1 27537 72.643 41.354 1 NaN NaN 0 12873000 12873000 0 24591 2001 9271 9485 38544 38544 LVPLDYGEDDK 11 1 0 Unmodified _LVPLDYGEDDK_ 0 0 0 P49756 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.3163 2 632.3088 1262.60305 76143.65 0.2923 0.00018482 0.6495 0.00041069 0.9418 0.00059551 632.308884108191 636.316422488502 69.717 0.4796 69.717 69.428 69.908 0 156 40 6 0 0 0 0.00046386 2 40472 76.465 76.465 1 1.3716 1.3453 0 22696000 10563000 12133000 24592 1587 9272 9486 38545;38546 38545 LVPLGVNQDLDK 12 1 0 Unmodified _LVPLGVNQDLDK_ 0 0 0 P55201 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8698 2 655.86936 1309.72417 75276.5 0.58595 0.00038431 0.49267 0.00032313 1.0786 0.00070744 655.86910305089 659.877167118235 80.996 0.49046 80.996 80.845 81.336 0 135 41 5 0 0 0 0.00077083 2 48258 66.056 66.056 1 0.88118 0.93453 0 16154000 8344800 7809700 24593 1616 9273 9487 38547;38548 38548 LVPLLLEDGGEAPAALEAALEEK 23 1 0 Unmodified _LVPLLLEDGGEAPAALEAALEEK_ 0 0 0 Q14204;B4DSR6 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1179.1432 2 1174.63341 2347.25226 58100.94 -0.091432 -0.0001074 0.1991 0.00023386 0.10766 0.00012647 1175.13506869914 1179.14181876329 133.45 0.20215 133.45 133.37 133.57 0 25 4 8 0 0 0 0.002709 1 89678 29.733 29.733 1 2.2995 2.3534 0 25638000 9093000 16545000 24594 1729 9274 9488 38549 38549 LVPQQLAH 8 0 0 Unmodified _LVPQQLAH_ 0 0 0 P10606;Q6FHJ9 P10606 P10606 COX5B Cytochrome c oxidase subunit 5B, mitochondrial ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.2636 2 453.263802 904.513051 NaN NaN NaN -0.37011 -0.00016776 NaN NaN NaN NaN 42.969 0.65352 42.969 42.71 43.364 0 0 0 0 0.0010949 1 22866 113.82 82.241 1 24595 1465 9275 9489 38550 38550 LVPQQLAH 8 0 0 Unmodified _LVPQQLAH_ 0 0 0 P10606;Q6FHJ9 P10606 P10606 COX5B Cytochrome c oxidase subunit 5B, mitochondrial ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.2645 2 453.263802 904.513051 NaN NaN NaN -0.093898 -4.2561E-05 NaN NaN NaN NaN 42.271 0.88147 42.271 41.885 42.767 0 0 0 0 0.0010949 1 22636 113.82 85.292 1 24596 1465 9275 9489 38551 38551 LVPQQLAH 8 0 0 Unmodified _LVPQQLAH_ 0 0 0 P10606;Q6FHJ9 P10606 P10606 COX5B Cytochrome c oxidase subunit 5B, mitochondrial ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 453.2639 2 453.263802 904.513051 NaN NaN NaN -0.3071 -0.0001392 NaN NaN NaN NaN 49.28 0.68303 49.28 48.972 49.655 0 0 0 0 0.041736 1 24017 53.185 43.715 1 24597 1465 9275 9489 38552 38552 LVPSCDQTLQEELAR 15 0 1 Unmodified _LVPSCDQTLQEELAR_ 0 0 0 A0A087WSZ2;Q08043 A0A087WSZ2 A0A087WSZ2 ACTN3 Alpha-actinin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.9608 3 586.961209 1757.8618 79350.12 0.71885 0.00042194 0.033173 1.9471E-05 0.75203 0.00044141 586.960918331304 590.297688802234 52.302 0.4874 52.302 52.031 52.518 -3.8147E-06 168 37 6 0 0 0 0.038403 1 29757 18.833 18.833 1 1.0161 1.005 0 12475000 6553700 5921800 24598 401 9276 9490 38553 38553 LVPTAVYQHMK 11 1 0 Oxidation (M) _LVPTAVYQHM(ox)K_ LVPTAVYQHM(1)K LVPTAVYQHM(67.99)K 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.855 2 651.847373 1301.68019 77846.84 0.84018 0.00054767 0.58714 0.00038272 1.4273 0.00093039 651.8477831759 655.854670980145 36.456 0.3092 36.456 36.294 36.603 0 90 28 6 0 0 0 0.00066578 2 18372 67.993 47.122 1 1.5654 1.5339 0 21384000 8755000 12630000 24599 1942 9277 9491 38554;38555 38554 1781 LVPTGLDFGQEGFTR 15 0 1 Unmodified _LVPTGLDFGQEGFTR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.9233 2 818.920112 1635.82567 66130 0.774 0.00063384 -0.38716 -0.00031705 0.38684 0.00031679 818.92002130695 823.923861509035 106.64 1.4653 106.64 105.95 107.41 0 645 108 11 0 0 0 0.00022295 2 66039 62.088 62.088 1 1.1318 1.3386 0 287740000 134130000 153610000 24600 1570 9278 9492 38556;38557 38556 LVPTGLDFGQEGFTR 15 0 1 Unmodified _LVPTGLDFGQEGFTR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.9248 2 818.920112 1635.82567 66483.84 0.90298 0.00073947 0.2459 0.00020138 1.1489 0.00094085 818.920372005176 823.924193781442 106.03 1.0149 106.03 105.6 106.62 0 565 77 11 0 0 0 1.8189E-10 2 67335 120.57 120.57 1 1.0305 1.1965 0 344860000 166570000 178290000 24601 1570 9278 9492 38558;38559 38559 LVPTGLDFGQEGFTR 15 0 1 Unmodified _LVPTGLDFGQEGFTR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 823.9251 2 818.920112 1635.82567 66372.37 0.99336 0.00081348 0.30628 0.00025082 1.2996 0.0010643 818.920317267132 823.924302920551 117.82 1.1813 117.82 117.51 118.69 0 263 50 10 0 0 0 0.00050188 2 69369 62.924 62.924 1 1.1167 0.9645 0 95031000 44258000 50773000 24602 1570 9278 9492 38560;38561 38561 LVPTGLDFGQEGFTR 15 0 1 Unmodified _LVPTGLDFGQEGFTR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 824.425 2 818.920112 1635.82567 66643.76 0.65106 0.00053317 0.37842 0.0003099 1.0295 0.00084307 818.920470150324 823.924472181576 117.67 1.2376 117.67 117.22 118.46 -7.6294E-06 227 57 7 0 0 0 1.0093E-05 3 68343 92.925 92.925 1 1.1423 0.99712 0 100390000 44362000 56031000 24603 1570 9278 9492 38562;38563;38564 38562 LVPVHYDETEAER 13 0 1 Unmodified _LVPVHYDETEAER_ 0 0 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.2592 3 519.922972 1556.74709 85139.99 0.28639 0.0001489 0.23278 0.00012103 0.51917 0.00026993 519.923106049004 523.259405453067 43.314 0.53049 43.314 43.096 43.627 3.8147E-06 170 43 6 0 0 0 0.0079185 1 23139 34.515 34.515 1 0.81374 0.83749 0 24915000 14297000 10618000 24604 1927 9279 9493 38565 38565 LVPVHYDETEAER 13 0 1 Unmodified _LVPVHYDETEAER_ 0 0 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2603 3 519.922972 1556.74709 84458.88 0.53066 0.0002759 -0.23058 -0.00011988 0.30008 0.00015602 519.92290209973 523.259124281372 42.272 0.58892 42.272 41.984 42.573 -3.8147E-06 243 50 9 0 0 0 0.001346 2 22777 48.527 48.527 1 0.83519 0.95837 0 52025000 25745000 26280000 24605 1927 9279 9493 38566;38567 38567 LVPVHYDETEAER 13 0 1 Unmodified _LVPVHYDETEAER_ 0 0 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.9231 3 519.922972 1556.74709 84962.66 0.0063143 3.2829E-06 0.23636 0.00012289 0.24267 0.00012617 519.922976776947 523.258907514052 50.436 0.68348 50.436 50.211 50.895 0 286 53 8 0 0 0 0.045735 1 24147 19.578 19.578 1 0.94981 0.81301 0 4492100 2204800 2287300 24606 1927 9279 9493 38568 38568 LVQAFQFTDK 10 1 0 Unmodified _LVQAFQFTDK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.8206 2 598.819138 1195.62372 78161.75 0.89623 0.00053668 0.22268 0.00013335 1.1189 0.00067002 598.81915512521 602.826289969268 80.117 0.99567 80.117 79.849 80.845 0 413 84 8 0 0 0 0.00022929 2 47500 93.111 74.016 1 2.888 3.3649 0 263820000 60518000 203300000 24607 1690 9280 9494 38569;38570 38570 LVQAFQFTDK 10 1 0 Unmodified _LVQAFQFTDK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.8201 2 598.819138 1195.62372 78142.3 0.73572 0.00044057 0.46411 0.00027792 1.1998 0.00071849 598.819258997607 602.826450013613 79.038 1.1667 79.038 78.448 79.615 0 489 99 9 0 0 0 0.00022929 2 47876 93.111 73.334 1 2.9034 3.31 0 151500000 38368000 113130000 24608 1690 9280 9494 38571;38572 38572 LVQAFQFTDK 10 1 0 Unmodified _LVQAFQFTDK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8256 2 598.819138 1195.62372 78388.31 0.70413 0.00042165 0.6049 0.00036222 1.309 0.00078387 598.819527264421 602.826290412569 91.416 0.95363 91.416 91.031 91.984 0 319 65 7 0 0 0 0.0020391 2 50738 70.908 62.587 1 2.5195 1.9552 0 14311000 3824500 10486000 24609 1690 9280 9494 38573;38574 38573 LVQAFQFTDK 10 1 0 Unmodified _LVQAFQFTDK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.827 2 598.819138 1195.62372 78700.13 0.56079 0.00033581 0.2555 0.000153 0.81629 0.00048881 598.819412880892 602.826190738531 91.279 1.4241 91.279 90.648 92.072 0 293 90 6 0 0 0 0.0002967 2 49838 90.906 75.024 1 2.5986 2.1249 0 12628000 3434100 9194400 24610 1690 9280 9494 38575;38576 38575 LVQAPLDADGDNVLQEK 17 1 0 Unmodified _LVQAPLDADGDNVLQEK_ 0 0 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.4806 2 912.97053 1823.92651 65477.71 0.60333 0.00055083 0.40945 0.00037381 1.0128 0.00092464 912.970349162011 917.479324909399 86.993 0.54015 86.993 86.71 87.251 0 143 40 6 0 0 0 0.00014443 2 52438 73.927 54.269 1 0.93892 1.0124 0 34155000 16328000 17826000 24611 1312 9281 9495 38577;38578 38578 LVQAPLDADGDNVLQEK 17 1 0 Unmodified _LVQAPLDADGDNVLQEK_ 0 0 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.9714 2 912.97053 1823.92651 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.753 1 86.753 86.253 87.253 0 0 0 0 0.0071494 1 52295 47.915 33.224 1 24612 1312 9281 9495 38579 38579 LVQAPLDADGDNVLQEK 17 1 0 Unmodified _LVQAPLDADGDNVLQEK_ 0 0 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.9781 2 912.97053 1823.92651 65074.76 0.27205 0.00024838 0.28099 0.00025653 0.55304 0.00050491 913.472667950984 917.478889901988 86.302 0.43469 86.302 86.119 86.554 0 138 38 5 0 0 0 4.3499E-05 2 53130 89.629 64.776 1 0.92752 0.93513 0 26974000 15746000 11228000 24613 1312 9281 9495 38580;38581 38580 LVQAPLDADGDNVLQEK 17 1 0 Unmodified _LVQAPLDADGDNVLQEK_ 0 0 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 912.97 2 912.97053 1823.92651 63835.36 0.47316 0.00043199 0.38409 0.00035066 0.85726 0.00078265 913.471831374291 917.479325486627 99.573 0.59201 99.573 99.272 99.864 -7.6294E-06 217 37 9 0 0 0 0.00045579 2 56230 57.434 44.75 1 1.4326 1.1164 0 12251000 4388000 7862600 24614 1312 9281 9495 38582;38583 38583 LVQAPLDADGDNVLQEK 17 1 0 Unmodified _LVQAPLDADGDNVLQEK_ 0 0 0 H7BYN4;Q02241;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 912.9698 2 912.97053 1823.92651 63815.64 0.38839 0.00035459 0.41912 0.00038264 0.80751 0.00073724 913.471841336262 916.977971624537 99.415 0.74822 99.415 99.004 99.752 7.6294E-06 261 53 7 0 0 0 0.00013109 3 55357 66.989 46.211 1 1.6066 1.3204 0 9756000 3507800 6248200 24615 1312 9281 9495 38584;38585;38586 38586 LVQDYGLESEVAQHLAATYGDK 22 1 0 Unmodified _LVQDYGLESEVAQHLAATYGDK_ 0 0 0 B7Z601;Q53T76;A8K1Z2;A0A140VJK2;P43304 B7Z601 B7Z601 GPD2 Glycerol-3-phosphate dehydrogenase;Glycerol-3-phosphate dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.3997 3 803.06405 2406.17032 71697.45 0.8024 0.00064438 -0.35361 -0.00028397 0.44879 0.00036041 803.398340570681 806.403615881645 106.84 0.37581 106.84 106.64 107.01 7.6294E-06 105 28 5 0 0 0 8.4773E-05 5 68109 36.454 36.454 1 1.1492 1.1674 0 12747000 5411700 7335200 24616 603 9282 9496 38587;38588;38589;38590;38591 38591 LVQEALEAVPR 11 0 1 Unmodified _LVQEALEAVPR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.856 2 612.85097 1223.68739 77792.66 0.68315 0.00041867 -0.37592 -0.00023038 0.30723 0.00018829 612.850676687537 617.854976197836 79.701 1.3137 79.701 79.35 80.664 0 422 113 7 0 0 0 1.2301E-12 4 47191 145.17 129.51 1 0.94507 1.0858 0 141000000 72083000 68921000 24617 1756 9283 9497 38592;38593;38594;38595 38592 LVQEALEAVPR 11 0 1 Unmodified _LVQEALEAVPR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8557 2 612.85097 1223.68739 77885.79 0.41758 0.00025591 -0.58871 -0.00036079 -0.17113 -0.00010488 612.850617586668 617.855012868675 78.622 1.1617 78.622 78.316 79.477 0 470 102 7 0 0 0 2.2158E-08 2 47595 121.9 118.18 1 0.94529 1.0866 0 200030000 100230000 99799000 24618 1756 9283 9497 38596;38597 38596 LVQEALEAVPR 11 0 1 Unmodified _LVQEALEAVPR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.8563 2 612.85097 1223.68739 77782.82 0.62299 0.0003818 -0.67043 -0.00041087 -0.047438 -2.9073E-05 612.850752695393 617.854612340212 91.173 1.5787 91.173 90.793 92.371 0 446 101 7 0 0 0 7.8316E-06 3 50468 109.66 96.31 1 1.3238 1.1068 0 24103000 11390000 12714000 24619 1756 9283 9497 38598;38599;38600 38598 LVQEALEAVPR 11 0 1 Unmodified _LVQEALEAVPR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.8549 2 612.85097 1223.68739 77310.97 0.41028 0.00025144 -0.88097 -0.00053991 -0.4707 -0.00028847 612.850547945962 617.854528498798 90.994 1.4207 90.994 90.668 92.089 0 428 90 7 0 0 0 2.4004E-08 2 49576 121.6 103.54 1 1.3492 1.1723 0 24352000 10543000 13808000 24620 1756 9283 9497 38601;38602 38601 LVQGSILK 8 1 0 Unmodified _LVQGSILK_ 0 0 0 Q6FI35;Q6FHF5;P12004;B4DUA2;Q7Z6A3;Q7Z6A2;Q7Z6A1 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.2834 2 429.276378 856.538203 92986.14 0.12426 5.3343E-05 0.014707 6.3132E-06 0.13897 5.9656E-05 429.27626283951 433.283402122193 48.448 0.84283 48.448 48.04 48.882 0 227 65 5 0 0 0 0.030669 1 26223 51.787 7.0951 1 0.72891 0.76676 0 30594000 17324000 13269000 24621 1473 9284 9498 38603 38603 LVQIEYALAAVAGGAPSVGIK 21 1 0 Unmodified _LVQIEYALAAVAGGAPSVGIK_ 0 0 0 H7C402;H3BT36;Q53GF5;A0A024RA52;P25787 H7C402 H7C402 PSMA2 Proteasome subunit alpha type;Proteasome subunit alpha type-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1018.0875 2 1014.08041 2026.14628 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.8 1 129.8 129.3 130.3 0 0 0 0 0.0011695 1 84595 54.501 39.469 1 24622 296 9285 9499 38604 38604 LVQSPNSYFMDVK 13 1 0 Oxidation (M) _LVQSPNSYFM(ox)DVK_ LVQSPNSYFM(1)DVK LVQSPNSYFM(113.69)DVK 0 1 0 H0YMV8;Q71UM5;C9JLI6;A4D1G5;P42677;Q5T4L4 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.8781 2 772.376691 1542.73883 68135.68 0.47518 0.00036702 0.15458 0.00011939 0.62976 0.00048641 772.37689802593 776.383901208309 77.818 0.78815 77.818 77.473 78.261 0 398 61 9 0 0 0 5.5089E-09 2 45851 113.69 107.06 1 1.1496 1.3365 0 252650000 116360000 136300000 24623 1298;1564 9286 9500 38605;38606 38606 988 LVQSPNSYFMDVK 13 1 0 Oxidation (M) _LVQSPNSYFM(ox)DVK_ LVQSPNSYFM(1)DVK LVQSPNSYFM(132.25)DVK 0 1 0 H0YMV8;Q71UM5;C9JLI6;A4D1G5;P42677;Q5T4L4 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.8865 2 772.376691 1542.73883 67920.92 0.45898 0.0003545 0.053415 4.1256E-05 0.51239 0.00039576 772.376879534912 776.383878728414 76.8 0.79041 76.8 76.471 77.262 0 405 56 10 0 0 0 6.4602E-14 2 46284 132.25 132.25 1 1.142 1.3377 0 312510000 134600000 177910000 24624 1298;1564 9286 9500 38607;38608 38608 988 LVQSPNSYFMDVK 13 1 0 Oxidation (M) _LVQSPNSYFM(ox)DVK_ LVQSPNSYFM(1)DVK LVQSPNSYFM(44.31)DVK 0 1 0 H0YMV8;Q71UM5;C9JLI6;A4D1G5;P42677;Q5T4L4 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.3859 2 772.376691 1542.73883 NaN NaN NaN 0.64379 0.00049725 NaN NaN NaN NaN 77.333 0.34443 77.333 77.239 77.584 0 0 0 0 0.0084014 1 46747 44.309 28.77 1 NaN NaN 0 9368800 0 9368800 24625 1298;1564 9286 9500 38609 38609 988 LVQSPNSYFMDVK 13 1 0 Oxidation (M) _LVQSPNSYFM(ox)DVK_ LVQSPNSYFM(1)DVK LVQSPNSYFM(84.66)DVK 0 1 0 H0YMV8;Q71UM5;C9JLI6;A4D1G5;P42677;Q5T4L4 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.3776 2 772.376691 1542.73883 67335.83 0.81941 0.00063289 -0.19025 -0.00014694 0.62917 0.00048595 772.376652364732 776.383514101478 89.325 1.1798 89.325 89.02 90.2 0 379 78 10 0 0 0 7.3102E-05 1 49273 84.658 84.658 1 1.1408 0.95187 0 48979000 21326000 27653000 24626 1298;1564 9286 9500 38610 38610 988 LVQSPNSYFMDVK 13 1 0 Oxidation (M) _LVQSPNSYFM(ox)DVK_ LVQSPNSYFM(1)DVK LVQSPNSYFM(75.7)DVK 0 1 0 H0YMV8;Q71UM5;C9JLI6;A4D1G5;P42677;Q5T4L4 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.3771 2 772.376691 1542.73883 67594.07 0.47483 0.00036674 0.035705 2.7578E-05 0.51053 0.00039432 772.376731330104 776.383777833102 89.301 1.0801 89.301 88.986 90.066 0 404 67 10 0 0 0 5.5749E-05 2 48413 90.653 90.653 1 1.1616 0.97542 0 49221000 21966000 27255000 24627 1298;1564 9286 9500 38611;38612 38612 988 LVQSPNSYFMDVK 13 1 0 Oxidation (M) _LVQSPNSYFM(ox)DVK_ LVQSPNSYFM(1)DVK LVQSPNSYFM(49.5)DVK 0 1 0 H0YMV8;Q71UM5;C9JLI6;A4D1G5;P42677;Q5T4L4 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.384 2 772.376691 1542.73883 NaN NaN NaN -0.48225 -0.00037248 NaN NaN NaN NaN 101.51 0.45399 101.51 101.22 101.67 0 0 0 0 0.0052956 1 56627 49.5 39.269 1 NaN NaN 0 3536000 0 3536000 24628 1298;1564 9286 9500 38613 38613 988 LVQSPNSYFMDVK 13 1 0 Unmodified _LVQSPNSYFMDVK_ 0 0 0 H0YMV8;Q71UM5;C9JLI6;A4D1G5;P42677;Q5T4L4 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.3802 2 764.379234 1526.74392 67149.3 0.49922 0.00038159 -0.20051 -0.00015326 0.29871 0.00022833 764.379495518015 768.386616548331 101.67 0.70473 101.67 101.33 102.03 0 318 46 11 0 0 0 0.00021195 2 57672 85.813 46.346 1 1.9823 1.6083 0 26270000 9034400 17236000 24629 1298;1564 9286 9501 38614;38615 38615 LVQSPNSYFMDVK 13 1 0 Unmodified _LVQSPNSYFMDVK_ 0 0 0 H0YMV8;Q71UM5;C9JLI6;A4D1G5;P42677;Q5T4L4 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.3861 2 764.379234 1526.74392 67890.86 0.63386 0.00048451 -0.13283 -0.00010153 0.50103 0.00038297 764.379191992324 768.386296246887 101.49 0.924 101.49 101.17 102.09 -7.6294E-06 346 65 9 0 0 0 0.0001182 2 56507 92.866 65.751 1 1.9158 1.5791 0 29588000 10623000 18965000 24630 1298;1564 9286 9501 38616;38617 38616 LVSDGNINSDR 11 0 1 Unmodified _LVSDGNINSDR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.2983 2 595.294016 1188.57348 NaN NaN NaN -0.13025 -7.754E-05 NaN NaN NaN NaN 26.335 0.34061 26.335 26.23 26.571 0 0 0 0 0.0022687 1 11881 76.228 34.78 1 NaN NaN 0 9201300 0 9201300 24631 415 9287 9502 38618 38618 LVSDIIDPVALEIPLSK 17 1 0 Unmodified _LVSDIIDPVALEIPLSK_ 0 0 0 Q5UIP0;H7C2B5 Q5UIP0 Q5UIP0 RIF1 Telomere-associated protein RIF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.0343 2 911.532235 1821.04992 65616.14 0.72805 0.00066364 0.21736 0.00019813 0.94541 0.00086177 912.033766391164 915.539550363455 132.37 0.45567 132.37 132.11 132.57 0 121 30 6 0 0 0 0.001924 1 86437 37.426 37.426 1 1.324 1.344 0 6525100 2522400 4002700 24632 1829 9288 9503 38619 38619 LVSDIIDPVALEIPLSK 17 1 0 Unmodified _LVSDIIDPVALEIPLSK_ 0 0 0 Q5UIP0;H7C2B5 Q5UIP0 Q5UIP0 RIF1 Telomere-associated protein RIF1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.1251 2 911.532235 1821.04992 65181.04 0.81732 0.00074501 0.17469 0.00015923 0.992 0.00090424 912.033741443569 916.041094313081 131.96 0.40488 131.96 131.76 132.16 -1.5259E-05 105 28 5 0 0 0 0.030652 1 88310 36.32 36.32 1 1.3929 1.4032 0 7265900 2889000 4376900 24633 1829 9288 9503 38620 38620 LVSESSDVLPK 11 1 0 Unmodified _LVSESSDVLPK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.3293 2 587.321711 1172.62887 78999.61 0.59761 0.00035099 0.0022889 1.3443E-06 0.5999 0.00035233 587.321773488536 591.32872697328 56.527 1.3641 56.527 56.194 57.558 3.8147E-06 602 115 7 0 0 0 5.7131E-08 4 31708 116.3 91.382 1 1.1265 1.3351 0 471800000 222760000 249040000 + 24634 1156 9289 9504 38621;38622;38623;38624 38621 LVSESSDVLPK 11 1 0 Unmodified _LVSESSDVLPK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.329 2 587.321711 1172.62887 78479.09 0.47961 0.00028169 0.085275 5.0084E-05 0.56489 0.00033177 587.321807344733 591.328829807076 55.672 1.2741 55.672 55.225 56.499 0 629 96 9 0 0 0 2.3195E-08 4 31741 121.73 100.81 1 1.0847 1.2768 0 421010000 199420000 221590000 + 24635 1156 9289 9504 38625;38626;38627;38628 38625 LVSESSDVLPK 11 1 0 Unmodified _LVSESSDVLPK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 591.3292 2 587.321711 1172.62887 79769.18 0.71155 0.00041791 -0.22037 -0.00012943 0.49119 0.00028848 587.321488909534 591.328712602163 65.603 1.9089 65.603 65.128 67.037 0 573 126 8 0 0 0 0.0011047 4 33803 70.056 50.962 1 1.8625 1.5165 0 31222000 10402000 20820000 + 24636 1156 9289 9504 38629;38630;38631;38632 38630 LVSESSDVLPK 11 1 0 Unmodified _LVSESSDVLPK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 591.329 2 587.321711 1172.62887 78283.25 0.4071 0.0002391 -0.0092397 -5.4267E-06 0.39786 0.00023367 587.321660566129 591.328779742595 66.159 1.6968 66.159 65.716 67.413 0 560 111 7 0 0 0 0.00077159 3 33315 72.607 51.982 1 1.8776 1.5245 0 24803000 8352900 16450000 + 24637 1156 9289 9504 38633;38634;38635 38633 LVSIGAEEIVDGNAK 15 1 0 Unmodified _LVSIGAEEIVDGNAK_ 0 0 0 A0A0S2Z3G9;O43707;B4DSX0;B4E337 A0A0S2Z3G9 A0A0S2Z3G9 ACTN4 Alpha-actinin-4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.9077 2 757.90667 1513.79879 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.836 1 85.836 85.336 86.336 7.6294E-06 0 0 0 0.00012494 1 51613 89.403 60.446 1 24638 548 9290 9505 38636 38636 LVSIVDSLHLEMEEALTEQVAR 22 0 1 Oxidation (M) _LVSIVDSLHLEM(ox)EEALTEQVAR_ LVSIVDSLHLEM(1)EEALTEQVAR LVSIVDSLHLEM(104.06)EEALTEQVAR 0 1 0 Q9BQG0;I3L1L3;B4DZZ1;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.1027 3 833.431745 2497.2734 NaN NaN NaN -0.081556 -6.7971E-05 NaN NaN NaN NaN 116.9 0.92262 116.9 116.56 117.48 0 0 0 0 6.74E-19 1 74830 104.06 95.696 1 NaN NaN 0 9134300 0 9134300 24639 1997 9291 9506 38637 38637 1836 LVSLGTCFGK 10 1 0 Unmodified _LVSLGTCFGK_ 0 0 0 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.2964 2 541.289159 1080.56377 83114.78 0.72586 0.0003929 -0.017746 -9.6059E-06 0.70812 0.0003833 541.288981725269 545.29632222748 76.246 0.88821 76.246 75.874 76.762 0 295 72 6 0 0 0 0.00051211 2 44710 95.502 43.714 1 1.1337 1.2289 0 44471000 23358000 21113000 24640 2119 9292 9507 38638;38639 38638 LVSLGTCFGK 10 1 0 Unmodified _LVSLGTCFGK_ 0 0 0 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.2972 2 541.289159 1080.56377 82854.53 0.39759 0.00021521 -0.12516 -6.7749E-05 0.27242 0.00014746 541.289058461638 545.296354150373 74.858 1.1509 74.858 74.692 75.843 0 387 102 5 0 0 0 2.4698E-05 2 45026 99.802 48.072 1 1.0445 1.1786 0 64020000 31204000 32816000 24641 2119 9292 9507 38640;38641 38640 LVSLGTCFGK 10 1 0 Unmodified _LVSLGTCFGK_ 0 0 0 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.2966 2 541.289159 1080.56377 NaN NaN NaN 0.15245 8.2521E-05 NaN NaN NaN NaN 86.661 0.93179 86.661 86.466 87.398 0 0 0 0 0.010728 1 47499 62.582 27.088 1 NaN NaN 0 13069000 0 13069000 24642 2119 9292 9507 38642 38642 LVSLGTCFGK 10 1 0 Unmodified _LVSLGTCFGK_ 0 0 0 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.2969 2 541.289159 1080.56377 81715.01 0.54451 0.00029474 0.062003 3.3561E-05 0.60651 0.0003283 541.289087397761 545.296285571655 86.722 0.84515 86.722 86.514 87.359 0 233 52 6 0 0 0 0.012313 2 46701 56.916 26.412 1 1.2069 0.96925 0 13976000 5715700 8260000 24643 2119 9292 9507 38643;38644 38643 LVSPGSANETSSILVESVTR 20 0 1 Unmodified _LVSPGSANETSSILVESVTR_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95;A0A0A0MT44 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1029.0448 2 1023.53931 2045.06406 NaN NaN NaN -0.030256 -3.0969E-05 NaN NaN NaN NaN 102.49 0.50317 102.49 102.17 102.67 0 0 0 0 0.0007506 2 63027 49.482 43.822 1 NaN NaN 0 6492900 0 6492900 24644 1402 9293 9508 38645;38646 38646 LVSPGSANETSSILVESVTR 20 0 1 Unmodified _LVSPGSANETSSILVESVTR_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95;A0A0A0MT44 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1023.5392 2 1023.53931 2045.06406 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.49 1 102.49 101.99 102.99 -7.6294E-06 0 0 0 0.032157 1 63108 36.77 29.226 1 24645 1402 9293 9508 38647 38647 LVSPGSANETSSILVESVTR 20 0 1 Unmodified _LVSPGSANETSSILVESVTR_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95;A0A0A0MT44 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1024.0414 2 1023.53931 2045.06406 61772.34 0.10757 0.0001101 -0.011948 -1.223E-05 0.095624 9.7875E-05 1024.04057621236 1028.54366521493 101.85 0.42485 101.85 101.57 102 0 116 32 5 0 0 0 6.4057E-07 3 64163 81.619 81.619 1 1.6429 1.6118 0 13856000 4638800 9217200 24646 1402 9293 9508 38648;38649;38650 38649 LVSPGSANETSSILVESVTR 20 0 1 Unmodified _LVSPGSANETSSILVESVTR_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95;A0A0A0MT44 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1028.5433 2 1023.53931 2045.06406 61068.07 0.57459 0.00058811 -0.11644 -0.00011918 0.45815 0.00046894 1024.04119813821 1028.54320056573 114.83 0.33601 114.83 114.64 114.97 0 59 14 6 0 0 0 0.00021227 1 67143 37.013 31.628 1 1.8268 1.5428 0 3000000 1091200 1908800 24647 1402 9293 9508 38651 38651 LVSPGSANETSSILVESVTR 20 0 1 Unmodified _LVSPGSANETSSILVESVTR_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95;A0A0A0MT44 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1028.5424 2 1023.53931 2045.06406 63066.85 0.43913 0.00044947 -0.41913 -0.000429 0.019994 2.0464E-05 1024.04006897201 1029.04420751273 114.75 0.3426 114.75 114.54 114.89 0 43 14 5 0 0 0 0.0020588 1 66146 33.796 28.412 1 1.4553 1.2322 0 3037800 759630 2278200 24648 1402 9293 9508 38652 38652 LVSQDNFGFDLPAVEAATK 19 1 0 Unmodified _LVSQDNFGFDLPAVEAATK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1012.0125 2 1011.51256 2021.01057 NaN NaN NaN -0.018632 -1.8847E-05 NaN NaN NaN NaN 129.65 0.36826 129.65 129.43 129.8 0 0 0 0 0.027705 1 77568 33.616 27.893 1 NaN NaN 0 1130200 1130200 0 24649 415 9294 9509 38653 38653 LVTANTIDQK 10 1 0 Unmodified _LVTANTIDQK_ 0 0 0 A0A087WSW7;F6XU50;Q6I7N8;A0A0B4J1V9;Q9NRZ9;Q9NW36 A0A087WSW7 A0A087WSW7 HELLS Lymphoid-specific helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.8157 2 551.808771 1101.60299 88268.61 0.45447 0.00025078 -0.20245 -0.00011172 0.25201 0.00013906 551.808321677443 555.815930263085 33.582 0.35232 33.582 33.386 33.738 0 76 27 4 0 0 0 0.0048948 2 16855 60.892 45.307 1 0.76451 0.78837 0 11523000 7204300 4319100 24650 400 9295 9510 38654;38655 38654 LVTCTGYHQVR 11 0 1 Unmodified _LVTCTGYHQVR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.3424 2 667.337704 1332.66085 74618.38 0.7302 0.00048729 -0.37635 -0.00025115 0.35385 0.00023614 667.337396764487 672.341626883466 25.002 0.28319 25.002 24.931 25.214 0 50 13 6 0 0 0 2.4358E-05 2 10651 104.17 75.768 1 0.8525 0.87592 0 25441000 12731000 12710000 24651 1859 9296 9511 38656;38657 38656 LVTCTGYHQVR 11 0 1 Unmodified _LVTCTGYHQVR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.5634 3 445.227561 1332.66085 88867.55 0.18638 8.2983E-05 -0.39374 -0.0001753 -0.20735 -9.232E-05 445.227542458093 448.563544395751 25.003 0.31992 25.003 24.916 25.236 0 72 15 7 0 0 0 0.00012591 1 10685 80.763 73.039 1 1.0507 1.1308 0 47516000 23700000 23816000 24652 1859 9296 9511 38658 38658 LVTCTGYHQVR 11 0 1 Unmodified _LVTCTGYHQVR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.5646 3 445.227561 1332.66085 88746.01 0.017328 7.715E-06 0.88048 0.00039201 0.89781 0.00039973 445.227771600101 448.564132315088 28.219 0.58031 28.219 27.923 28.503 0 154 29 8 0 0 0 0.0086993 2 11147 39.785 31.681 1 1.3213 1.1348 0 6373900 2962800 3411200 24653 1859 9296 9511 38659;38660 38659 LVTCTGYHQVR 11 0 1 Unmodified _LVTCTGYHQVR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.3428 2 667.337704 1332.66085 NaN NaN NaN 0.12515 8.3516E-05 NaN NaN NaN NaN 28.202 0.38694 28.202 27.974 28.361 0 0 0 0 0.050218 1 11226 44.203 24.932 1 NaN NaN 0 1517300 0 1517300 24654 1859 9296 9511 38661 38661 LVTCTGYHQVR 11 0 1 Unmodified _LVTCTGYHQVR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 448.5634 3 445.227561 1332.66085 87557.05 -0.25388 -0.00011303 -0.48673 -0.00021671 -0.74061 -0.00032974 445.227161761327 448.563558065307 28.376 0.53877 28.376 28.13 28.669 0 134 28 6 0 0 0 0.02086 2 10792 32.254 24.53 1 1.3043 1.1229 0 4414700 2106600 2308100 24655 1859 9296 9511 38662;38663 38662 LVTCTGYHQVR 11 0 1 Unmodified _LVTCTGYHQVR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.3424 2 667.337704 1332.66085 NaN NaN NaN 0.1223 8.1618E-05 NaN NaN NaN NaN 28.389 0.45845 28.389 28.185 28.643 0 0 0 0 0.0040739 1 10784 66.621 43.881 1 NaN NaN 0 1125200 0 1125200 24656 1859 9296 9511 38664 38664 LVTLPVSFAQLK 12 1 0 Unmodified _LVTLPVSFAQLK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.4034 2 658.402838 1314.79112 75631.75 0.7588 0.0004996 0.097916 6.4468E-05 0.85672 0.00056407 658.402901955637 662.409910246973 117.88 0.83764 117.88 117.6 118.43 -7.6294E-06 295 50 10 0 0 0 1.4464E-05 2 75451 105.98 87.195 1 0.94677 1.0703 0 144740000 73581000 71160000 24657 1958 9297 9512 38665;38666 38666 LVTLPVSFAQLK 12 1 0 Unmodified _LVTLPVSFAQLK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.4033 2 658.402838 1314.79112 74263.91 0.59399 0.00039109 -0.013851 -9.1192E-06 0.58014 0.00038197 658.402842846891 662.409824627201 117.37 0.79169 117.37 117.07 117.86 0 290 49 9 0 0 0 5.0707E-13 2 76849 134.59 112.51 1 0.93028 1.0655 0 163420000 83686000 79731000 24658 1958 9297 9512 38667;38668 38668 LVTLPVSFAQLK 12 1 0 Unmodified _LVTLPVSFAQLK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.4109 2 658.402838 1314.79112 75041.77 0.75484 0.00049699 -0.001059 -6.9723E-07 0.75378 0.00049629 658.402828671546 662.409857057102 130.1 1.1329 130.1 129.79 130.92 0 275 54 10 0 0 0 0.00019462 2 78652 82.749 68.083 1 0.70663 0.5893 0 48627000 28977000 19649000 24659 1958 9297 9512 38669;38670 38669 LVTLPVSFAQLK 12 1 0 Unmodified _LVTLPVSFAQLK_ 0 0 0 Q96AG4 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.4037 2 658.402838 1314.79112 75154.41 1.0209 0.00067218 0.16887 0.00011119 1.1898 0.00078336 658.402963975943 662.4099258519 129.84 1.0585 129.84 129.57 130.63 0 212 40 10 0 0 0 0.00020601 2 77620 87.298 68.986 1 0.67235 0.56833 0 57956000 34884000 23072000 24660 1958 9297 9512 38671;38672 38672 LVTQDTENELK 11 1 0 Unmodified _LVTQDTENELK_ 0 0 0 Q8WW55;Q59H39;P51692;K7EIF9;K7EK35;Q59GY7;Q8WWS9;A8K6I5;P42229 Q8WW55 Q8WW55 STAT5B;STAT5A Signal transducer and activator of transcription;Signal transducer and activator of transcription 5B;Signal transducer and activator of transcription 5A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3347 2 645.332807 1288.65106 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.886 1 39.886 39.386 40.386 0 0 0 0 0.00081495 1 20759 70.552 44.613 1 24661 1597 9298 9513 38673 38673 LVTTGVLK 8 1 0 Unmodified _LVTTGVLK_ 0 0 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.7792 2 415.770929 829.527304 93300.64 0.077712 3.2311E-05 1.9065 0.00079266 1.9842 0.00082497 415.771479507234 419.778787300115 50.838 0.50481 50.838 50.585 51.089 0 207 45 6 0 0 0 0.0078194 1 27957 81.297 30.331 1 1.5527 1.8193 0 293720000 127270000 166450000 24662 1451 9299 9514 38674 38674 LVTTGVLK 8 1 0 Unmodified _LVTTGVLK_ 0 0 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.771 2 415.770929 829.527304 93397.93 0.14043 5.8388E-05 1.2823 0.00053314 1.4227 0.00059153 415.771210927632 419.778529055238 49.503 0.4573 49.503 49.271 49.728 0 176 37 7 0 0 0 0.010845 2 27802 71.296 23.447 1 1.5654 1.8035 0 180760000 72132000 108630000 24663 1451 9299 9514 38675;38676 38676 LVTVVEEK 8 1 0 Unmodified _LVTVVEEK_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.7716 2 458.771126 915.527698 90639.36 0.57131 0.0002621 -1.5705 -0.00072049 -0.99916 -0.00045839 458.771251775317 462.778606259417 39.95 0.35398 39.95 39.735 40.089 0 111 30 5 0 0 0 0.01739 2 21269 60.478 26.474 1 1.2773 1.363 0 23158000 9735600 13422000 24664 476 9300 9515 38677;38678 38678 LVVALSR 7 0 1 Unmodified _LVVALSR_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.2497 2 379.250163 756.485774 98434.67 0.029655 1.1247E-05 0.32182 0.00012205 0.35148 0.0001333 379.250114821433 384.254296480447 55.349 0.50265 55.349 54.876 55.378 0 137 49 4 0 0 0 0.026488 1 30979 88.029 6.6476 1 0.96286 0.98499 0 33926000 17841000 16085000 24665 1995 9301 9516 38679 38679 LVVALSR 7 0 1 Unmodified _LVVALSR_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.2512 2 379.250163 756.485774 98434.65 0.22048 8.3616E-05 0.12654 4.799E-05 0.34702 0.00013161 379.250174662006 384.254231916889 56.012 1.1889 56.012 55.516 56.705 0 292 96 4 0 0 0 0.010632 2 31437 110.61 10.692 1 0.77937 0.81945 0 39734000 21644000 18090000 24666 1995 9301 9516 38680;38681 38680 LVVALSR 7 0 1 Unmodified _LVVALSR_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.2502 2 379.250163 756.485774 98303.12 0.19462 7.3809E-05 -0.083035 -3.1491E-05 0.11158 4.2318E-05 379.250043699445 384.254159864395 54.913 1.7048 54.913 53.901 55.606 0 469 140 5 0 0 0 0.010079 4 31338 118.69 18.767 1 0.83974 0.93822 0 44477000 25674000 18802000 24667 1995 9301 9516 38682;38683;38684;38685 38685 LVVALSR 7 0 1 Unmodified _LVVALSR_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 379.25 2 379.250163 756.485774 97807.52 -0.066956 -2.5393E-05 0.10077 3.8217E-05 0.033813 1.2824E-05 379.250097567093 384.254248261766 63.859 1.8361 63.859 62.95 64.786 3.8147E-06 520 151 5 0 0 0 0.027015 2 32852 85.359 10.921 1 1.5788 1.2891 0 14384000 5543500 8840800 24668 1995 9301 9516 38686;38687 38687 LVVALSR 7 0 1 Unmodified _LVVALSR_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 379.2502 2 379.250163 756.485774 97892.07 -0.1646 -6.2425E-05 0.18675 7.0826E-05 0.022151 8.4008E-06 379.250121344561 384.254251313016 64.246 1.6495 64.246 63.387 65.037 0 520 144 7 0 0 0 0.043207 2 32382 58.194 14.379 1 1.5398 1.2427 0 10923000 4047400 6875900 24669 1995 9301 9516 38688;38689 38689 LVVDSHVQYR 10 0 1 Unmodified _LVVDSHVQYR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.8875 3 405.887533 1214.64077 93600.6 0.13837 5.6163E-05 0.14828 6.0184E-05 0.28665 0.00011635 405.887489692595 409.223713623076 39.02 0.4184 39.02 38.803 39.222 0 182 32 8 0 0 0 0.00060638 2 20101 68.657 43.557 1 0.98704 1.0857 0 54443000 30838000 23605000 24670 1854 9302 9517 38690;38691 38691 LVVDSHVQYR 10 0 1 Unmodified _LVVDSHVQYR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 409.2234 3 405.887533 1214.64077 93986.66 -0.13095 -5.3149E-05 0.10826 4.3942E-05 -0.022684 -9.207E-06 405.887511850651 409.223678245876 37.834 0.48725 37.834 37.603 38.09 0 166 37 7 0 0 0 0.00018042 2 19661 74.162 49.813 1 0.85656 0.98223 0 81888000 47279000 34610000 24671 1854 9302 9517 38692;38693 38692 LVVDSHVQYR 10 0 1 Unmodified _LVVDSHVQYR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.3281 2 608.327662 1214.64077 78879.17 0.71048 0.00043221 -0.29189 -0.00017756 0.4186 0.00025464 608.327578731176 613.331923372056 44.752 0.42304 44.752 44.545 44.968 -3.8147E-06 86 32 5 0 0 0 0.039394 1 20771 39.022 14.867 1 0.77172 0.66318 0 1100900 529610 571340 24672 1854 9302 9517 38694 38694 LVVGNGPEGPGLSSTGK 17 1 0 Unmodified _LVVGNGPEGPGLSSTGK_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.9257 2 784.917569 1567.82059 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.074 1 62.074 61.574 62.574 0 0 0 0 0.00026436 1 35603 74.46 36.104 1 24673 646 9303 9518 38695 38695 LVVGNGPEGPGLSSTGK 17 1 0 Unmodified _LVVGNGPEGPGLSSTGK_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.9182 2 784.917569 1567.82059 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.16 1 62.16 61.66 62.66 0 0 0 0 0.00042127 1 35665 67.456 40.127 1 24674 646 9303 9518 38696 38696 LVVGNGPEGPGLSSTGK 17 1 0 Unmodified _LVVGNGPEGPGLSSTGK_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.426 2 784.917569 1567.82059 70370.86 0.38439 0.00030171 0.080971 6.3556E-05 0.46536 0.00036527 784.917371894616 788.924841971918 71.509 0.39057 71.509 71.303 71.694 0 102 27 5 0 0 0 0.0081885 1 37747 32.933 32.933 1 1.6618 1.4048 0 2079400 789070 1290300 24675 646 9303 9518 38697 38697 LVVHCEQLDAQNQQR 15 0 1 Unmodified _LVVHCEQLDAQNQQR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.9747 3 613.303969 1836.89008 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.463 1 34.463 33.963 34.963 0 0 0 0 0.036086 1 17465 45.207 34.263 1 24676 1392 9304 9519 38698 38698 LVVLAIANTMDLPER 15 0 1 Oxidation (M) _LVVLAIANTM(ox)DLPER_ LVVLAIANTM(1)DLPER LVVLAIANTM(86.01)DLPER 0 1 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 840.9663 2 835.960923 1669.90729 NaN NaN NaN -0.69701 -0.00058267 NaN NaN NaN NaN 108.85 0.26494 108.85 108.69 108.95 -7.6294E-06 0 0 0 1.0866E-05 1 68055 86.014 58.586 1 NaN NaN 0 4511700 0 4511700 24677 1103 9305 9520 38699 38699 846 LVVLAIANTMDLPER 15 0 1 Oxidation (M) _LVVLAIANTM(ox)DLPER_ LVVLAIANTM(1)DLPER LVVLAIANTM(68.54)DLPER 0 1 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.9658 2 835.960923 1669.90729 NaN NaN NaN -0.3368 -0.00028155 NaN NaN NaN NaN 108.3 0.3634 108.3 108.12 108.48 0 0 0 0 0.00020238 1 69310 68.536 51.368 1 NaN NaN 0 3892700 0 3892700 24678 1103 9305 9520 38700 38700 846 LVVLGIRPIR 10 0 2 Unmodified _LVVLGIRPIR_ 0 0 1 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.2608 3 379.260642 1134.7601 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.659 1 83.659 83.159 84.159 -7.6294E-06 0 0 0 0.041835 1 51294 40.724 31.069 1 24679 231 9306 9521 38701 38701 LVVLGSGGVGK 11 1 0 Unmodified _LVVLGSGGVGK_ 0 0 0 A0A024RB87;P61224;F5H6R7;F5H004;F5GX62;Q9BXV4;E7ESV4;F5H7Y6;Q5U0C3;A8KAH9;P62834;F5H4H0;F5GYH7;F5H077;F5GWU8;F5H491;F5H0B7;F5H500;A0A075B6Q0;F5GYB5;F8WBC0;B7ZAY2 A0A024RB87 A0A024RB87 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.3126 2 493.305667 984.596781 87325.59 0.25608 0.00012633 0.093913 4.6328E-05 0.35 0.00017266 493.30565176841 497.312750429516 61.151 0.55287 61.151 60.874 61.427 3.8147E-06 174 39 6 0 0 0 0.00036511 2 34858 84.213 66.827 1 1.8801 2.0231 0 40437000 12865000 27572000 24680 329 9307 9522 38702;38703 38702 LVVLGSGGVGK 11 1 0 Unmodified _LVVLGSGGVGK_ 0 0 0 A0A024RB87;P61224;F5H6R7;F5H004;F5GX62;Q9BXV4;E7ESV4;F5H7Y6;Q5U0C3;A8KAH9;P62834;F5H4H0;F5GYH7;F5H077;F5GWU8;F5H491;F5H0B7;F5H500;A0A075B6Q0;F5GYB5;F8WBC0;B7ZAY2 A0A024RB87 A0A024RB87 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.313 2 493.305667 984.596781 87353.73 0.18647 9.1985E-05 0.10243 5.0531E-05 0.2889 0.00014252 493.305567480917 497.312771678234 59.889 0.51247 59.889 59.639 60.152 0 201 41 7 0 0 0 0.00011853 2 34779 96.331 78.946 1 1.8638 2.0883 0 54459000 17440000 37018000 24681 329 9307 9522 38704;38705 38704 LVVLGSGGVGK 11 1 0 Unmodified _LVVLGSGGVGK_ 0 0 0 A0A024RB87;P61224;F5H6R7;F5H004;F5GX62;Q9BXV4;E7ESV4;F5H7Y6;Q5U0C3;A8KAH9;P62834;F5H4H0;F5GYH7;F5H077;F5GWU8;F5H491;F5H0B7;F5H500;A0A075B6Q0;F5GYB5;F8WBC0;B7ZAY2 A0A024RB87 A0A024RB87 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.313 2 493.305667 984.596781 85944.86 -0.14941 -7.3703E-05 0.26726 0.00013184 0.11786 5.8139E-05 493.305703965852 497.312899743025 70.734 0.50057 70.734 70.455 70.956 0 124 42 4 0 0 0 0.016079 1 36406 46.001 28.616 1 1.0882 0.87602 0 3011300 1612200 1399000 24682 329 9307 9522 38706 38706 LVVLVGPVGVGLNELK 16 1 0 Unmodified _LVVLVGPVGVGLNELK_ 0 0 0 U5GXS2;S4R337;B3KQ45;Q5T2T1 U5GXS2 U5GXS2 MPP7 MAGUK p55 subfamily member 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.5085 2 803.500541 1604.98653 73547.68 1.1411 0.00091691 0.15736 0.00012644 1.2985 0.0010433 804.002111747561 807.507248233884 124.54 0.32765 124.54 124.34 124.67 0 44 20 4 0 0 0 3.3263E-06 1 82834 89.548 89.548 1 1.6921 1.7316 0 5036300 2023800 3012500 24683 926 9308 9523 38707 38707 LVVPASQCGSLIGK 14 1 0 Unmodified _LVVPASQCGSLIGK_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;F8W0G4;F8VXH9;F8W1G6;J3QT27;Q5MJP6;E9PFP8;P57721;H3BND9;Q15366;B4DLC0 H3BRU6;Q15366 Q15366 PCBP2;PCBP3 Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.9063 2 714.897594 1427.78064 70913.59 0.44294 0.00031665 0.047041 3.3629E-05 0.48998 0.00035028 714.897200248351 718.905032102205 78.212 1.1153 78.212 77.593 78.709 0 479 96 9 0 0 0 0.0069087 1 47667 41.283 41.283 1 2.2959 2.6553 0 201610000 59243000 142370000 24684 1263;1760 9309 9524 38708 38708 LVVPATQCGSLIGK 14 1 0 Unmodified _LVVPATQCGSLIGK_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.9051 2 721.905419 1441.79629 71385.45 0.62669 0.00045241 0.017719 1.2792E-05 0.64441 0.0004652 721.905375522312 725.912553763481 82.092 0.7281 82.092 81.704 82.432 0 357 65 8 0 0 0 3.0789E-05 2 50076 96.015 46.664 1 1.8267 2.0792 0 147620000 53953000 93669000 24685 1759 9310 9525 38709;38710 38710 LVVVFGGTGAQGGSVAR 17 0 1 Unmodified _LVVVFGGTGAQGGSVAR_ 0 0 0 Q9HBL8 Q9HBL8 Q9HBL8 NMRAL1 NmrA-like family domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.9412 2 787.936096 1573.85764 NaN NaN NaN -0.21491 -0.00016934 NaN NaN NaN NaN 84.391 0.40215 84.391 84.213 84.615 0 0 0 0 4.1047E-07 1 50600 89.43 76.854 1 NaN NaN 0 10027000 0 10027000 24686 2049 9311 9526 38711 38711 LVVVFGGTGAQGGSVAR 17 0 1 Unmodified _LVVVFGGTGAQGGSVAR_ 0 0 0 Q9HBL8 Q9HBL8 Q9HBL8 NMRAL1 NmrA-like family domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.9402 2 787.936096 1573.85764 NaN NaN NaN -0.44296 -0.00034903 NaN NaN NaN NaN 83.355 0.41936 83.355 83.185 83.605 0 0 0 0 0.0055449 1 50993 49.732 14.959 1 NaN NaN 0 6286700 0 6286700 24687 2049 9311 9526 38712 38712 LVWFDLDLSTK 11 1 0 Unmodified _LVWFDLDLSTK_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.8688 2 668.861003 1335.70745 74734.12 0.92679 0.00061989 0.1203 8.0462E-05 1.0471 0.00070036 668.860654713465 672.868157630351 124.16 0.67036 124.16 123.77 124.44 0 113 41 7 0 0 0 2.2237E-05 2 82539 104.05 104.05 1 0.72174 0.74666 0 18580000 10280000 8300400 24688 1726 9312 9527 38713;38714 38714 LVWFDLDLSTK 11 1 0 Unmodified _LVWFDLDLSTK_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.3632 2 668.861003 1335.70745 NaN NaN NaN 0.36433 0.00024368 NaN NaN NaN NaN 124.29 0.19118 124.29 124.26 124.45 -7.6294E-06 0 0 0 0.042579 1 82772 46.462 26.675 1 NaN NaN 0 6407400 6407400 0 24689 1726 9312 9527 38715 38715 LVWVPSDK 8 1 0 Unmodified _LVWVPSDK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.2733 2 472.26601 942.517468 88972.43 0.15407 7.2763E-05 0.23198 0.00010955 0.38605 0.00018232 472.266081890617 476.273222747703 69.453 0.92116 69.453 68.987 69.908 0 264 78 4 0 0 0 0.031343 1 40120 51.346 51.346 1 1.4216 1.4447 0 27887000 9970300 17916000 24690 81 9313 9528 38716 38716 LVWVPSDK 8 1 0 Unmodified _LVWVPSDK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.2663 2 472.26601 942.517468 88619.82 0.23503 0.000111 0.069176 3.2669E-05 0.30421 0.00014367 472.265996373827 476.273085143835 68.341 0.87891 68.341 67.712 68.59 0 257 72 4 0 0 0 0.012282 2 40311 67.981 67.981 1 1.504 1.5673 0 34013000 15306000 18707000 24691 81 9313 9528 38717;38718 38718 LVYAPLSGVGGVLYDK 16 1 0 Unmodified _LVYAPLSGVGGVLYDK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.4673 2 825.958706 1649.90286 67508.65 0.93119 0.00076912 -0.64687 -0.00053429 0.28432 0.00023483 825.958225723531 829.965916794717 113.74 0.88551 113.74 113.4 114.29 0 283 64 9 0 0 0 1.2378E-08 2 71978 105.65 105.65 1 0.87295 0.9696 0 59822000 32785000 27037000 24692 1742 9314 9529 38719;38720 38720 LVYAPLSGVGGVLYDK 16 1 0 Unmodified _LVYAPLSGVGGVLYDK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.9655 2 825.958706 1649.90286 67676.38 0.81953 0.0006769 -0.65809 -0.00054355 0.16145 0.00013335 826.45791357035 829.965690241015 113.15 1.0813 113.15 112.83 113.91 7.6294E-06 311 75 10 0 0 0 8.3651E-13 2 73271 123.64 117.54 1 0.88131 0.99264 0 69252000 37367000 31885000 24693 1742 9314 9529 38721;38722 38722 LVYAPLSGVGGVLYDK 16 1 0 Unmodified _LVYAPLSGVGGVLYDK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 830.4678 2 825.958706 1649.90286 67308.84 0.90718 0.00074929 -0.033887 -2.799E-05 0.87329 0.0007213 826.459986481212 829.965872025217 124.93 0.77893 124.93 124.66 125.44 0 193 32 10 0 0 0 1.7701E-08 2 74854 102.62 102.62 1 1.3722 1.1224 0 34660000 14405000 20255000 24694 1742 9314 9529 38723;38724 38724 LVYAPLSGVGGVLYDK 16 1 0 Unmodified _LVYAPLSGVGGVLYDK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 825.9588 2 825.958706 1649.90286 67425.37 0.88801 0.00073346 0.22531 0.00018609 1.1133 0.00091955 825.958802755125 829.966044380596 124.76 0.71894 124.76 124.51 125.23 0 208 33 10 0 0 0 0.0001139 2 73819 78.324 78.324 1 1.4215 1.1901 0 45642000 19165000 26478000 24695 1742 9314 9529 38725;38726 38726 LWALPQCQLLGVFSGHR 17 0 1 Unmodified _LWALPQCQLLGVFSGHR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.3544 3 661.352483 1981.03562 76853.61 0.55442 0.00036667 -0.34036 -0.0002251 0.21406 0.00014157 661.686283086692 665.022413869937 122.74 0.51514 122.74 122.48 123 0 141 36 5 0 0 0 1.3388E-05 2 79437 79.013 79.013 1 0.50759 0.52247 0 14154000 8302700 5850900 24696 1698;436 9315 9530 38727;38728 38727 LWALPQCQLLGVFSGHR 17 0 1 Unmodified _LWALPQCQLLGVFSGHR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.3539 3 661.352483 1981.03562 76197.66 0.84425 0.00055835 -0.42603 -0.00028176 0.41822 0.00027659 661.352546260786 665.02245029886 122.08 0.60104 122.08 121.81 122.41 0 182 42 6 0 0 0 5.6175E-05 1 80799 51.495 51.495 1 0.62682 0.61926 0 15035000 8002900 7031800 24697 1698;436 9315 9530 38729 38729 LWALPQCQLLGVFSGHR 17 0 1 Unmodified _LWALPQCQLLGVFSGHR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.0228 3 661.352483 1981.03562 74646.82 1.2691 0.00083931 -0.049832 -3.2957E-05 1.2193 0.00080636 661.686856277969 665.02295267737 134.32 0.33597 134.32 134.14 134.48 0 56 15 8 0 0 0 3.7422E-07 2 81956 88.992 88.992 1 1.235 1.0078 0 15505000 7517900 7986600 24698 1698;436 9315 9530 38730;38731 38730 LWALPQCQLLGVFSGHR 17 0 1 Unmodified _LWALPQCQLLGVFSGHR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.0233 3 661.352483 1981.03562 74947.95 1.1287 0.0007465 -0.028463 -1.8824E-05 1.1003 0.00072767 661.686815464485 664.688622567452 134.2 0.19342 134.2 134.1 134.3 0 61 10 8 0 0 0 1.093E-05 2 80965 80.609 80.609 1 1.2247 1.0042 0 13598000 6251300 7346200 24699 1698;436 9315 9530 38732;38733 38733 LWALQDFSCLK 11 1 0 Unmodified _LWALQDFSCLK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.8539 2 690.852655 1379.69076 72400.45 0.67998 0.00046976 0.52658 0.00036379 1.2066 0.00083355 690.853092216582 694.859521557504 116.1 0.61219 116.1 115.8 116.42 0 174 37 7 0 0 0 2.9784E-05 1 74052 101.11 101.11 1 0.61496 0.60247 0 22283000 12660000 9623900 24700 1698 9316 9531 38734 38734 LWALQDFSCLK 11 1 0 Unmodified _LWALQDFSCLK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.8552 2 690.852655 1379.69076 72366.78 0.85419 0.00059012 0.20044 0.00013848 1.0546 0.00072859 690.853220430794 694.859580914997 115.5 0.55254 115.5 115.29 115.84 7.6294E-06 190 35 8 0 0 0 0.00041576 1 75256 80.239 80.239 1 0.65924 0.67554 0 25531000 14698000 10834000 24701 1698 9316 9531 38735 38735 LWALQDFSCLK 11 1 0 Unmodified _LWALQDFSCLK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.8597 2 690.852655 1379.69076 73057.53 0.68283 0.00047174 0.62654 0.00043285 1.3094 0.00090458 690.852781846534 694.859837816232 127.65 0.89839 127.65 127.19 128.09 0 163 35 8 0 0 0 4.5423E-08 2 76945 118.18 118.18 1 1.2003 0.95651 0 9732600 4496900 5235700 24702 1698 9316 9531 38736;38737 38736 LWALQDFSCLK 11 1 0 Unmodified _LWALQDFSCLK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.8593 2 690.852655 1379.69076 73159.8 0.64391 0.00044485 0.57058 0.00039419 1.2145 0.00083904 690.85273673262 694.859751392925 127.43 0.8197 127.43 126.98 127.79 0 165 33 10 0 0 0 0.00047771 2 75872 75.378 75.378 1 1.1835 0.97359 0 10192000 4803000 5389200 24703 1698 9316 9531 38738;38739 38739 LWAPDSPNR 9 0 1 Unmodified _LWAPDSPNR_ 0 0 0 Q9Y263;E5RIM3 Q9Y263 Q9Y263 PLAA Phospholipase A-2-activating protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.2706 2 528.267073 1054.51959 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.817 1 46.817 46.317 47.317 0 0 0 0 0.043828 1 25912 48.561 27.261 1 24704 2123 9317 9532 38740 38740 LWDHATMTEVK 11 1 0 Oxidation (M) _LWDHATM(ox)TEVK_ LWDHATM(1)TEVK LWDHATM(42.19)TEVK 0 1 0 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.8314 2 673.824095 1345.63364 NaN NaN NaN -0.40267 -0.00027133 NaN NaN NaN NaN 34.014 0.12331 34.014 33.975 34.098 0 0 0 0 0.018361 1 16947 42.19 26.93 1 NaN NaN 0 2683400 0 2683400 24705 2136 9318 9533 38741 38741 1970 LWDIPNSK 8 1 0 Unmodified _LWDIPNSK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.7677 2 486.761092 971.507631 88201.54 0.14485 7.0509E-05 0.59071 0.00028754 0.73557 0.00035805 486.761526518943 490.768128695212 70.199 0.77414 70.199 69.863 70.637 0 258 69 5 0 0 0 0.011448 1 40721 69.905 25.138 1 1.105 1.0879 0 24117000 12978000 11140000 24706 1936 9319 9534 38742 38742 LWDIPNSK 8 1 0 Unmodified _LWDIPNSK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.7683 2 486.761092 971.507631 87045.93 0.37549 0.00018277 0.43409 0.0002113 0.80957 0.00039407 486.761462387695 490.768154012451 68.955 0.67487 68.955 68.618 69.293 0 219 58 6 0 0 0 0.034442 1 41040 49.418 25.263 1 1.073 1.138 0 35960000 18034000 17926000 24707 1936 9319 9534 38743 38743 LWDIPNSK 8 1 0 Unmodified _LWDIPNSK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.761 2 486.761092 971.507631 88237.95 0.07905 3.8479E-05 0.14591 7.1023E-05 0.22496 0.0001095 486.761075573734 490.76841116958 79.929 0.69288 79.929 79.57 80.262 -7.6294E-06 207 42 7 0 0 0 0.011877 2 43056 68.915 35.557 1 1.2247 0.96425 0 5749800 2750800 2999100 24708 1936 9319 9534 38744;38745 38745 LWDIPNSK 8 1 0 Unmodified _LWDIPNSK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.761 2 486.761092 971.507631 87387.13 0.19407 9.4468E-05 0.25109 0.00012222 0.44517 0.00021669 486.760968812817 490.768296853828 80.141 0.74226 80.141 79.793 80.535 -7.6294E-06 185 43 6 0 0 0 0.036259 2 42352 48.756 24.124 1 1.2145 0.96527 0 4035600 1856400 2179200 24709 1936 9319 9534 38746;38747 38747 LWDLTTGTTTR 11 0 1 Unmodified _LWDLTTGTTTR_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;D6R9L0;D6RFX4;B4DVD2;D6RFZ9;D6RAU2;E9PD14;B4E0C3 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8349 2 632.830234 1263.64592 77578.99 0.70795 0.00044801 0.16033 0.00010146 0.86828 0.00054947 632.830203917984 637.834454537302 79.799 1.0402 79.799 79.499 80.54 0 431 89 8 0 0 0 5.7534E-06 1 47261 110.47 89.735 1 1.4611 1.6553 0 106280000 43092000 63188000 24710 1227 9320 9535 38748 38748 LWDLTTGTTTR 11 0 1 Unmodified _LWDLTTGTTTR_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;D6R9L0;D6RFX4;B4DVD2;D6RFZ9;D6RAU2;E9PD14;B4E0C3 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.8306 2 632.830234 1263.64592 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.649 1 78.649 78.149 79.149 0 0 0 0 0.00028304 1 47715 78.934 36.955 1 24711 1227 9320 9535 38749 38749 LWDLTTGTTTR 11 0 1 Unmodified _LWDLTTGTTTR_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;D6R9L0;D6RFX4;B4DVD2;D6RFZ9;D6RAU2;E9PD14;B4E0C3 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.8348 2 632.830234 1263.64592 78415.69 0.71758 0.00045411 0.1927 0.00012194 0.91028 0.00057605 632.830211964153 637.834435884118 90.822 0.8642 90.822 90.412 91.277 0 238 50 7 0 0 0 0.001099 1 50265 70.1 61.88 1 1.9415 1.6086 0 11159000 4209500 6949300 24712 1227 9320 9535 38750 38750 LWDLTTGTTTR 11 0 1 Unmodified _LWDLTTGTTTR_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;D6R9L0;D6RFX4;B4DVD2;D6RFZ9;D6RAU2;E9PD14;B4E0C3 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.8345 2 632.830234 1263.64592 76986.84 0.51265 0.00032442 -0.14648 -9.2699E-05 0.36617 0.00023172 632.830084376276 637.834186141118 90.763 0.75175 90.763 90.416 91.168 0 215 42 7 0 0 0 0.00038057 1 49414 83 74.78 1 1.7956 1.4711 0 8934000 2923600 6010300 24713 1227 9320 9535 38751 38751 LWDYIDGILIK 11 1 0 Unmodified _LWDYIDGILIK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3886 2 674.879196 1347.74384 74882.38 0.90794 0.00061275 -0.069576 -4.6955E-05 0.83836 0.00056579 674.878975693895 678.886238775222 125.22 0.68244 125.22 124.92 125.61 -7.6294E-06 234 44 7 0 0 0 0.00046386 2 81380 76.465 76.465 1 0.77735 0.82369 0 16188000 9608600 6579000 24714 716 9321 9536 38752;38753 38753 LWDYIDGILIK 11 1 0 Unmodified _LWDYIDGILIK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.8869 2 674.879196 1347.74384 74897.56 1.0774 0.0007271 0.010159 6.8563E-06 1.0875 0.00073396 674.879049863265 678.886245381257 124.8 0.72128 124.8 124.5 125.23 -7.6294E-06 250 50 7 0 0 0 0.00042966 2 83077 79.148 79.148 1 0.81812 0.87558 0 21185000 11454000 9730500 24715 716 9321 9536 38754;38755 38755 LWEVATAR 8 0 1 Unmodified _LWEVATAR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2615 2 473.261259 944.507966 87873.25 0.15221 7.2036E-05 -0.030554 -1.446E-05 0.12166 5.7576E-05 473.261020614454 478.265305973804 59.105 0.88147 59.105 58.595 59.476 -3.8147E-06 278 70 6 0 0 0 0.0010264 2 33639 114.6 30.801 1 0.66365 0.73408 0 59547000 37530000 22017000 24716 1726 9322 9537 38756;38757 38757 LWEVATAR 8 0 1 Unmodified _LWEVATAR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2612 2 473.261259 944.507966 88037.94 0.061286 2.9004E-05 0.071724 3.3944E-05 0.13301 6.2948E-05 473.261118298793 478.265337616941 58.044 0.69754 58.044 57.731 58.428 0 227 51 6 0 0 0 0.0080668 2 33693 80.229 32.486 1 0.65301 0.75295 0 54775000 30828000 23947000 24717 1726 9322 9537 38758;38759 38759 LWEVATAR 8 0 1 Unmodified _LWEVATAR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.2653 2 473.261259 944.507966 89075.34 0.2214 0.00010478 0.049377 2.3368E-05 0.27077 0.00012815 473.261167828866 478.265283975236 68.415 1.2491 68.415 67.862 69.111 0 293 90 6 0 0 0 0.015065 1 34863 61.999 10.311 1 1.172 0.97627 0 6964200 3326900 3637300 24718 1726 9322 9537 38760 38760 LWNLNNYR 8 0 1 Unmodified _LWNLNNYR_ 0 0 0 Q6P2Q9;B4DK16;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.7831 2 546.78289 1091.55123 82871.63 0.69668 0.00038093 -0.28206 -0.00015422 0.41462 0.00022671 546.782788865884 551.787172223247 75.911 0.60783 75.911 75.558 76.166 0 140 51 4 0 0 0 0.0067093 1 44562 86.086 86.086 1 0.80166 0.84147 0 11924000 5341700 6581800 24719 1854 9323 9538 38761 38761 LWNLNNYR 8 0 1 Unmodified _LWNLNNYR_ 0 0 0 Q6P2Q9;B4DK16;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.7831 2 546.78289 1091.55123 NaN NaN NaN -0.28003 -0.00015312 NaN NaN NaN NaN 74.585 0.4247 74.585 74.375 74.799 0 0 0 0 0.0035023 1 44850 95.62 48.553 1 NaN NaN 0 13109000 13109000 0 24720 1854 9323 9538 38762 38762 LWNTLGVCK 9 1 0 Unmodified _LWNTLGVCK_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6RFX4;B4DVD2;D6RBD0;D6RFZ9;D6RAU2;E9PD14;B4E0C3 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.7961 2 545.789327 1089.5641 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.24 1 73.24 72.74 73.74 0 0 0 0 0.0029865 1 42964 77.923 30.18 1 24721 1227 9324 9539 38763 38763 LWNTLGVCK 9 1 0 Unmodified _LWNTLGVCK_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6RFX4;B4DVD2;D6RBD0;D6RFZ9;D6RAU2;E9PD14;B4E0C3 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.7905 2 545.789327 1089.5641 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.536 1 73.536 73.036 74.036 7.6294E-06 0 0 0 0.0033111 1 43138 72.485 41.766 1 24722 1227 9324 9539 38764 38764 LWNTLGVCK 9 1 0 Unmodified _LWNTLGVCK_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6RFX4;B4DVD2;D6RBD0;D6RFZ9;D6RAU2;E9PD14;B4E0C3 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.7911 2 545.789327 1089.5641 NaN NaN NaN 3.4773 0.0018979 NaN NaN NaN NaN 71.373 0.11098 71.373 71.34 71.451 0 0 0 0 0.028466 1 42785 53.968 24.161 1 NaN NaN 0 3591800 3591800 0 24723 1227 9324 9539 38765 38765 LWNTLGVCK 9 1 0 Unmodified _LWNTLGVCK_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6RFX4;B4DVD2;D6RBD0;D6RFZ9;D6RAU2;E9PD14;B4E0C3 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.7969 2 545.789327 1089.5641 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.468 1 71.468 70.968 71.968 0 0 0 0 0.0026291 1 42848 83.265 44.473 1 24724 1227 9324 9539 38766 38766 LWQCGEGFR 9 0 1 Unmodified _LWQCGEGFR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.7657 2 576.766383 1151.51821 79494.45 0.2943 0.00016974 -0.2909 -0.00016778 0.0033967 1.9591E-06 576.765709576344 581.770723334609 58.544 0.88187 58.544 58.059 58.941 0 339 71 7 0 0 0 0.0028606 2 33158 73.26 27.542 1 0.53435 0.54528 0 26827000 17470000 9357200 24725 1389 9325 9540 38767;38768 38768 LWQCGEGFR 9 0 1 Unmodified _LWQCGEGFR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.7706 2 576.766383 1151.51821 79303.15 0.59667 0.00034414 -0.36212 -0.00020886 0.23454 0.00013528 576.765610116178 581.77055375264 57.454 1.0102 57.454 56.802 57.812 0 259 78 5 0 0 0 0.0061036 1 33173 65.038 28.017 1 0.51288 0.56989 0 43147000 27488000 15658000 24726 1389 9325 9540 38769 38769 LWQCGEGFR 9 0 1 Unmodified _LWQCGEGFR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.7666 2 576.766383 1151.51821 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.593 1 67.593 67.093 68.093 0 0 0 0 0.011714 1 35221 61.999 16.281 1 24727 1389 9325 9540 38770 38770 LWQCGEGFR 9 0 1 Unmodified _LWQCGEGFR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.7701 2 576.766383 1151.51821 NaN NaN NaN -0.11548 -6.6607E-05 NaN NaN NaN NaN 68.204 0.82696 68.204 67.85 68.677 0 0 0 0 0.016025 1 34700 61.999 16.281 1 NaN NaN 0 3446300 0 3446300 24728 1389 9325 9540 38771 38771 LWSLDSDEPVADIEGHTVR 19 0 1 Unmodified _LWSLDSDEPVADIEGHTVR_ 0 0 0 Q6IAP9;Q5T1M7;Q59EL4;O43172 Q6IAP9 Q6IAP9 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.6826 3 713.683281 2138.02801 71803.62 0.6699 0.00047809 0.32251 0.00023017 0.9924 0.00070826 714.017252124321 717.353764352521 102.5 0.47566 102.5 102.25 102.73 0 121 38 5 0 0 0 0.013057 1 63192 21.803 0 1 1.1531 1.1572 0 7910800 4115400 3795400 24729 1381 9326 9541 38772 38772 LWSLDSDEPVADIEGHTVR 19 0 1 Unmodified _LWSLDSDEPVADIEGHTVR_ 0 0 0 Q6IAP9;Q5T1M7;Q59EL4;O43172 Q6IAP9 Q6IAP9 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.8754 3 713.683281 2138.02801 72088.16 1.1808 0.00084271 0.093802 6.6945E-05 1.2746 0.00090966 713.683764257239 717.019511194008 113.94 0.41524 113.94 113.72 114.14 7.6294E-06 56 18 5 0 0 0 0.027341 1 66463 27.924 0 1 0.83449 0.71095 0 2821300 1675900 1145400 24730 1381 9326 9541 38773 38773 LWTLVSEQTR 10 0 1 Unmodified _LWTLVSEQTR_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.836 2 616.83532 1231.65609 77974.27 0.51329 0.00031662 -0.24358 -0.00015025 0.26972 0.00016637 616.835476693054 621.83901042736 83.271 1.287 83.271 82.802 84.089 0 587 109 8 0 0 0 9.7206E-05 2 49832 97.431 63.178 1 0.62021 0.73592 0 704900000 440990000 263910000 24731 1247 9327 9542 38774;38775 38775 LWTLVSEQTR 10 0 1 Unmodified _LWTLVSEQTR_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8357 2 616.83532 1231.65609 77030.77 0.29676 0.00018305 0.071032 4.3815E-05 0.36779 0.00022687 616.835442850694 621.839395515609 82.098 1.357 82.098 81.746 83.103 0 652 115 9 0 0 0 0.00069328 3 50153 82.749 52.495 1 0.60194 0.70769 0 945170000 566660000 378510000 24732 1247 9327 9542 38776;38777;38778 38777 LWTLVSEQTR 10 0 1 Unmodified _LWTLVSEQTR_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.8393 2 616.83532 1231.65609 77374.02 0.57668 0.00035572 0.080061 4.9384E-05 0.65674 0.0004051 616.835507150297 621.839422769889 94.772 2.86 94.772 94.343 97.203 7.6294E-06 900 183 9 0 0 0 2.4126E-09 4 52887 127.68 88.531 1 0.80539 0.69838 0 179610000 97721000 81887000 24733 1247 9327 9542 38779;38780;38781;38782 38779 LWTLVSEQTR 10 0 1 Unmodified _LWTLVSEQTR_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.8359 2 616.83532 1231.65609 76742.97 0.52724 0.00032522 -0.1869 -0.00011529 0.34035 0.00020994 616.835398259231 621.839271998427 94.694 2.957 94.694 94.253 97.21 0 793 182 10 0 0 0 1.1374E-05 6 52656 104.2 64.13 1 0.79716 0.69613 0 158410000 88154000 70258000 24734 1247 9327 9542 38783;38784;38785;38786;38787;38788 38786 LWVLETK 7 1 0 Unmodified _LWVLETK_ 0 0 0 Q15061;C9IZK7;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.7704 2 444.763104 887.511654 NaN NaN NaN 0.68666 0.0003054 NaN NaN NaN NaN 81.771 0.74595 81.771 81.666 82.412 0 0 0 0 0.052116 1 48849 57.281 33.309 1 NaN NaN 0 23994000 0 23994000 24735 1752 9328 9543 38789 38789 LWVLETK 7 1 0 Unmodified _LWVLETK_ 0 0 0 Q15061;C9IZK7;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.7711 2 444.763104 887.511654 90395.71 0.07711 3.4296E-05 0.13698 6.0923E-05 0.21409 9.5219E-05 444.763055239174 448.770298957199 92.773 0.92707 92.773 92.468 93.396 0 194 55 6 0 0 0 0.060758 1 51727 50.127 29.572 1 1.1266 0.89078 0 10560000 4528300 6031600 24736 1752 9328 9543 38790 38790 LWVLETK 7 1 0 Unmodified _LWVLETK_ 0 0 0 Q15061;C9IZK7;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 448.7696 2 444.763104 887.511654 89324.52 -0.14331 -6.374E-05 0.19903 8.8522E-05 0.055719 2.4782E-05 444.763054716851 448.770264691035 92.67 1.0337 92.67 92.256 93.29 0 206 60 7 0 0 0 0.037624 1 50820 60.76 27.022 1 1.0992 0.8949 0 7290000 3455700 3834300 24737 1752 9328 9543 38791 38791 LYALDVLLTR 10 0 1 Unmodified _LYALDVLLTR_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.8537 2 588.852981 1175.69141 79998.86 1.1492 0.0006767 0.026724 1.5736E-05 1.1759 0.00069244 588.852863783307 593.857018136594 119.02 0.54155 119.02 118.81 119.36 0 81 34 4 0 0 0 0.00086964 1 76656 79.906 46.11 1 0.53274 0.55186 0 5876600 3719100 2157500 24738 288 9329 9544 38792 38792 LYALDVLLTR 10 0 1 Unmodified _LYALDVLLTR_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.8536 2 588.852981 1175.69141 79983.63 0.58394 0.00034386 0.42839 0.00025226 1.0123 0.00059612 588.852877478617 593.857687662097 118.57 0.54272 118.57 118.3 118.84 0 93 33 4 0 0 0 0.0010607 1 77993 76.827 52.672 1 0.71872 0.72214 0 6652500 3646500 3006000 24739 288 9329 9544 38793 38793 LYALDVLLTR 10 0 1 Unmodified _LYALDVLLTR_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.858 2 588.852981 1175.69141 80117.69 0.5714 0.00033647 0.32457 0.00019112 0.89597 0.00052759 588.853160718615 593.857045665391 131.1 0.48883 131.1 130.9 131.38 0 78 21 5 0 0 0 0.026516 1 79631 44.203 25.978 1 1.4678 1.2877 0 1696500 765850 930640 24740 288 9329 9544 38794 38794 LYALGLVPTR 10 0 1 Unmodified _LYALGLVPTR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.8349 2 551.834591 1101.65463 81708.83 0.46865 0.00025861 -0.66772 -0.00036847 -0.19907 -0.00010986 551.834586481152 556.837545852298 99.354 0.92297 99.354 98.916 99.839 0 380 77 6 0 0 0 0.001179 2 60583 74.92 57.68 1 0.70815 0.73251 0 37313000 21952000 15361000 24741 2073 9330 9545 38795;38796 38795 LYALGLVPTR 10 0 1 Unmodified _LYALGLVPTR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.8345 2 551.834591 1101.65463 81888.16 0.7605 0.00041967 -0.65273 -0.0003602 0.10777 5.9471E-05 551.834586205267 556.837681652449 98.401 0.81246 98.401 98.123 98.936 7.6294E-06 343 68 6 0 0 0 0.0011505 2 61494 75.378 62.79 1 0.77343 0.8945 0 68568000 40084000 28484000 24742 2073 9330 9545 38797;38798 38797 LYALGLVPTR 10 0 1 Unmodified _LYALGLVPTR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.8353 2 551.834591 1101.65463 81516.67 0.72189 0.00039836 0.23109 0.00012753 0.95298 0.00052589 551.834689015805 556.838540673345 111.93 0.60776 111.93 111.66 112.27 0 159 37 6 0 0 0 0.00041053 2 64861 87.308 87.308 1 0.98665 0.81028 0 12022000 7161200 4861300 24743 2073 9330 9545 38799;38800 38799 LYALGLVPTR 10 0 1 Unmodified _LYALGLVPTR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.8391 2 551.834591 1101.65463 81464.05 0.58686 0.00032385 -0.10171 -5.6125E-05 0.48515 0.00026773 551.834555694726 556.838384504272 111.69 0.59241 111.69 111.47 112.06 0 163 34 6 0 0 0 0.00041053 2 63790 87.308 85.676 1 1.0344 0.84155 0 9788600 4412900 5375700 24744 2073 9330 9545 38801;38802 38802 LYCQELK 7 1 0 Unmodified _LYCQELK_ 0 0 0 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.2417 2 477.241678 952.468803 87502.46 0.037158 1.7733E-05 1.3795 0.00065835 1.4167 0.00067609 477.241550830748 481.248838698236 31.185 0.54708 31.185 30.915 31.462 0 203 46 6 0 0 0 0.027069 1 15343 86.866 61.248 1 0.67732 0.76001 0 77144000 44561000 32583000 24745 125 9331 9546 38803 38803 LYCQELK 7 1 0 Unmodified _LYCQELK_ 0 0 0 A0A024R2Z6;Q9BVP2;C9JZT7;B4DMU5 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 477.2417 2 477.241678 952.468803 88176.76 0.30211 0.00014418 0.093791 4.4761E-05 0.3959 0.00018894 477.2412942759 481.24895388006 36.067 1.1111 36.067 35.717 36.828 0 268 98 4 0 0 0 0.056643 1 15675 52.018 36.579 1 1.232 0.96627 0 3800100 1662400 2137700 24746 125 9331 9546 38804 38804 LYDIDVAK 8 1 0 Unmodified _LYDIDVAK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.7552 2 468.755475 935.496398 87917.92 0.14319 6.712E-05 -0.57555 -0.00026979 -0.43236 -0.00020267 468.755230298146 472.76223342407 62.645 3.6694 62.645 62.233 65.903 0 1514 340 9 0 0 0 0.0080668 5 36266 80.229 42.096 1 0.66561 0.80359 0 1556600000 919100000 637500000 24747 796 9332 9547 38805;38806;38807;38808;38809 38807 LYDIDVAK 8 1 0 Unmodified _LYDIDVAK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.7554 2 468.755475 935.496398 87759.81 0.27362 0.00012826 -0.48664 -0.00022812 -0.21302 -9.9855E-05 468.755395668782 472.762182517526 61.696 1.6126 61.696 61.09 62.703 0 1079 150 9 0 0 0 0.0080668 4 36311 80.229 34.213 1 0.61974 0.73334 0 2031700000 1272500000 759230000 24748 796 9332 9547 38810;38811;38812;38813 38812 LYDIDVAK 8 1 0 Unmodified _LYDIDVAK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.7558 2 468.755475 935.496398 88354.27 0.11566 5.4215E-05 0.81063 0.00037999 0.92629 0.0004342 468.755806863942 472.763095787001 62.844 1.3019 62.844 62.599 63.901 0 367 114 6 0 0 0 0.011754 2 36857 69.198 35.025 1 0.75614 0.81119 0 37278000 21169000 16109000 24749 796 9332 9547 38814;38815 38815 LYDIDVAK 8 1 0 Unmodified _LYDIDVAK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 468.7552 2 468.755475 935.496398 87726.44 0.14933 7E-05 -0.539 -0.00025266 -0.38966 -0.00018266 468.755168649586 472.762256798626 72.009 3.902 72.009 71.53 75.432 0 1360 285 9 0 0 0 0.030747 3 38251 51.736 31.176 1 0.80032 0.70148 0 203180000 109740000 93440000 24750 796 9332 9547 38816;38817;38818 38818 LYDIDVAK 8 1 0 Unmodified _LYDIDVAK_ 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.7551 2 468.755475 935.496398 88058.79 0.094823 4.4449E-05 -0.52358 -0.00024543 -0.42876 -0.00020098 468.755242486509 472.762231786548 72.535 3.2647 72.535 72.06 75.325 0 1329 239 10 0 0 0 0.039273 3 37756 47.657 22.839 1 0.81045 0.70044 0 221730000 124250000 97475000 24751 796 9332 9547 38819;38820;38821 38821 LYDILGVPPGASENELK 17 1 0 Unmodified _LYDILGVPPGASENELK_ 0 0 0 A0A024R6S1;O60884;T2DN57;T2DPK5;I3L320 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 912.4919 2 907.980367 1813.94618 65816.87 0.66725 0.00060585 -0.024122 -2.1902E-05 0.64313 0.00058395 907.979953110986 911.987182769142 121.21 0.72533 121.21 120.8 121.52 0 115 33 5 0 0 0 0.0065792 1 72090 33.968 33.968 1 1.1064 0.8768 0 4213400 2061400 2152100 24752 208 9333 9548 38822 38822 LYDNLLEQNLIR 12 0 1 Unmodified _LYDNLLEQNLIR_ 0 0 0 O00231 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.4131 2 752.411923 1502.80929 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.39 1 109.39 108.89 109.89 0 0 0 0 0.019404 1 70216 51.762 36.191 1 24753 1360 9334 9549 38823 38823 LYDNLLEQNLIR 12 0 1 Unmodified _LYDNLLEQNLIR_ 0 0 0 O00231 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.4156 2 752.411923 1502.80929 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.46 1 109.46 108.96 109.96 0 0 0 0 0.0020071 1 70273 68.847 53.275 1 24754 1360 9334 9549 38824 38824 LYDVPANSMR 10 0 1 Oxidation (M) _LYDVPANSM(ox)R_ LYDVPANSM(1)R LYDVPANSM(46.16)R 0 1 0 J3QT28;A0A140VJF3;O43684;J3QSX4 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.2886 2 591.284605 1180.55466 76873.3 0.86298 0.00051026 -0.73318 -0.00043352 0.12979 7.6744E-05 591.2848816008 596.288700209273 37.34 0.61614 37.34 37.015 37.631 0 146 52 4 0 0 0 0.010492 1 18900 46.158 38.115 1 1.6259 1.6441 0 15343000 4735300 10608000 24755 600 9335 9550 38825 38825 458 LYDVVAVFPK 10 1 0 Unmodified _LYDVVAVFPK_ 0 0 0 Q5VU10;P78346;B4DJR3;Q5VU11 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.8378 2 575.828975 1149.6434 80296.29 0.71674 0.00041272 -0.10295 -5.9282E-05 0.61379 0.00035344 575.828947604391 579.835993308291 106.52 0.51789 106.52 106.21 106.73 0 104 37 4 0 0 0 0.00076782 1 66074 81.548 66.397 1 1.956 1.9255 0 9104300 3382600 5721700 24756 1663 9336 9551 38826 38826 LYDVVAVFPK 10 1 0 Unmodified _LYDVVAVFPK_ 0 0 0 Q5VU10;P78346;B4DJR3;Q5VU11 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.8363 2 575.828975 1149.6434 81998.99 0.77931 0.00044875 0.040699 2.3436E-05 0.82001 0.00047218 575.828841940489 579.83618021634 105.81 0.56018 105.81 105.49 106.05 7.6294E-06 128 41 4 0 0 0 0.00076782 2 67092 81.548 66.397 1 1.665 1.7413 0 10307000 4371500 5935300 24757 1663 9336 9551 38827;38828 38827 LYDVVAVFPK 10 1 0 Unmodified _LYDVVAVFPK_ 0 0 0 Q5VU10;P78346;B4DJR3;Q5VU11 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.8381 2 575.828975 1149.6434 85847.73 0.77805 0.00044802 0.17439 0.00010042 0.95245 0.00054845 575.829047574383 579.836391080194 117.83 0.4199 117.83 117.65 118.07 0 52 18 5 0 0 0 0.025149 1 69487 44.753 36.71 1 1.21 1.0652 0 969720 443210 526500 24758 1663 9336 9551 38829 38829 LYDVVAVFPK 10 1 0 Unmodified _LYDVVAVFPK_ 0 0 0 Q5VU10;P78346;B4DJR3;Q5VU11 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.8364 2 575.828975 1149.6434 83523.97 0.39475 0.00022731 0.65554 0.00037748 1.0503 0.00060479 575.829248709201 579.836237567876 117.67 0.42265 117.67 117.42 117.84 -7.6294E-06 56 20 4 0 0 0 0.010129 1 68382 53.775 40.397 1 0.98525 0.8681 0 1196300 688110 508220 24759 1663 9336 9551 38830 38830 LYELDGLR 8 0 1 Unmodified _LYELDGLR_ 0 0 0 Q5LJA5;Q5LJA9;Q9Y5K5;Q5LJB0;B2RB07;H0Y4E0;B4DW59;B7Z9U9;H0Y6Y4 Q5LJA5 Q5LJA5 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.7699 2 489.766374 977.518196 91689.86 0.30767 0.00015069 -0.40334 -0.00019754 -0.095667 -4.6854E-05 489.766911125648 494.770048636772 76.382 0.48573 76.382 76.096 76.582 0 82 39 4 0 0 0 0.033338 1 45087 55.676 24.387 1 2.7348 2.8554 0 4893800 1510300 3383500 24760 1811 9337 9552 38831 38831 LYEPDQLQELK 11 1 0 Unmodified _LYEPDQLQELK_ 0 0 0 Q9NZB2;A0A0C4DG79 Q9NZB2 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.3665 2 688.358825 1374.7031 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.723 1 78.723 78.223 79.223 0 0 0 0 0.0065898 1 47767 63.184 33.375 1 24761 2086 9338 9553 38832 38832 LYESLLVGSLPDMNK 15 1 0 Oxidation (M) _LYESLLVGSLPDM(ox)NK_ LYESLLVGSLPDM(1)NK LYESLLVGSLPDM(126.19)NK 0 1 0 P13807;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.9376 2 847.937113 1693.85967 66131.45 0.73974 0.00062725 0.22251 0.00018868 0.96225 0.00081593 847.937557007281 851.945354353327 106.75 0.47491 106.75 106.5 106.98 -7.6294E-06 176 36 7 0 0 0 2.4455E-15 1 66336 126.19 126.19 1 0.74721 0.77466 0 12604000 6839300 5764800 24762 1479 9339 9554 38833 38833 1235 LYESLLVGSLPDMNK 15 1 0 Oxidation (M) _LYESLLVGSLPDM(ox)NK_ LYESLLVGSLPDM(1)NK LYESLLVGSLPDM(105.46)NK 0 1 0 P13807;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.438 2 847.937113 1693.85967 67255.55 0.85812 0.00072763 0.2973 0.00025209 1.1554 0.00097972 848.438805962053 852.445922855405 106.17 0.51219 106.17 105.93 106.44 0 179 39 6 0 0 0 1.7135E-07 1 67473 105.46 105.46 1 0.62236 0.64526 0 18773000 10360000 8412300 24763 1479 9339 9554 38834 38834 1235 LYESLLVGSLPDMNK 15 1 0 Oxidation (M) _LYESLLVGSLPDM(ox)NK_ LYESLLVGSLPDM(1)NK LYESLLVGSLPDM(85.84)NK 0 1 0 P13807;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.439 2 847.937113 1693.85967 66069.7 0.97051 0.00082293 -0.14858 -0.00012599 0.82193 0.00069695 848.438756487483 851.944160250901 118.02 0.56306 118.02 117.72 118.28 0 134 23 8 0 0 0 2.1174E-05 1 69576 85.845 85.845 1 0.30607 0.24524 0 8424900 6373900 2051100 24764 1479 9339 9554 38835 38835 1235 LYESLLVGSLPDMNK 15 1 0 Oxidation (M) _LYESLLVGSLPDM(ox)NK_ LYESLLVGSLPDM(1)NK LYESLLVGSLPDM(92.94)NK 0 1 0 P13807;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 847.938 2 847.937113 1693.85967 65424.34 0.52884 0.00044843 0.26572 0.00022532 0.79457 0.00067374 848.439075136227 851.944529267277 117.85 0.55645 117.85 117.53 118.09 -7.6294E-06 140 26 7 0 0 0 4.878E-06 1 68532 92.943 92.943 1 0.31843 0.26121 0 8923500 6658000 2265400 24765 1479 9339 9554 38836 38836 1235 LYEWTTEK 8 1 0 Unmodified _LYEWTTEK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.2712 2 535.263665 1068.51278 83883.51 0.32919 0.0001762 0.10558 5.651E-05 0.43476 0.00023271 535.263642755653 539.270875953882 52.474 1.0725 52.474 52.127 53.2 0 369 81 7 0 0 0 0.011008 1 29142 70.919 62.156 1 0.64499 0.70973 0 54856000 33140000 21716000 24766 1770 9340 9555 38837 38837 LYEWTTEK 8 1 0 Unmodified _LYEWTTEK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.2708 2 535.263665 1068.51278 83903.13 0.49486 0.00026488 -0.10043 -5.3757E-05 0.39443 0.00021113 535.263688330708 539.270621770742 51.501 0.93732 51.501 50.852 51.789 0 331 75 6 0 0 0 0.0018982 1 28986 104.75 94.037 1 0.65195 0.72774 0 52589000 32458000 20131000 24767 1770 9340 9555 38838 38838 LYEWTTEK 8 1 0 Unmodified _LYEWTTEK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.2709 2 535.263665 1068.51278 82338.78 0.41073 0.00021985 -0.041274 -2.2092E-05 0.36946 0.00019776 535.26370717022 539.270635236862 60.296 0.82782 60.296 60.071 60.899 0 315 69 6 0 0 0 0.022631 1 30802 57.047 57.047 1 1.293 1.0339 0 8876900 4250900 4625900 24768 1770 9340 9555 38839 38839 LYEWTTEK 8 1 0 Unmodified _LYEWTTEK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.2708 2 535.263665 1068.51278 83644.22 0.41178 0.00022041 0.10465 5.6013E-05 0.51643 0.00027642 535.263617952743 539.27073817629 60.908 0.8376 60.908 60.459 61.297 0 317 72 7 0 0 0 0.062964 1 30363 39.022 39.022 1 1.1953 0.97562 0 5685600 2754400 2931200 24769 1770 9340 9555 38840 38840 LYFDNLLSQR 10 0 1 Unmodified _LYFDNLLSQR_ 0 0 0 Q96SB8 Q96SB8 Q96SB8 SMC6 Structural maintenance of chromosomes protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.8398 2 634.83532 1267.65609 78690.22 0.7481 0.00047492 -0.24941 -0.00015834 0.49868 0.00031658 634.834778214567 639.839125327236 116.8 0.39029 116.8 116.55 116.94 0 49 17 5 0 0 0 0.041181 1 67746 38.303 38.303 1 1.2028 1.0464 0 1541000 782740 758260 24770 1989 9341 9556 38841 38841 LYGDADYLEER 11 0 1 Unmodified _LYGDADYLEER_ 0 0 0 P17812;B4E1E0;B4DMB5 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.3137 2 672.309332 1342.60411 73778.3 0.74097 0.00049816 0.097103 6.5283E-05 0.83807 0.00056344 672.309505470682 677.313323592896 68.151 0.63004 68.151 67.846 68.476 0 234 55 6 0 0 0 0.00046689 2 39363 76.228 65.063 1 1.8705 1.9136 0 32227000 11005000 21222000 24771 1494 9342 9557 38842;38843 38842 LYGDADYLEER 11 0 1 Unmodified _LYGDADYLEER_ 0 0 0 P17812;B4E1E0;B4DMB5 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.3092 2 672.309332 1342.60411 73133.07 0.46662 0.00031371 0.17327 0.00011649 0.63988 0.0004302 672.309666192253 677.313524495194 67.067 0.63071 67.067 66.784 67.415 0 237 52 6 0 0 0 0.00085012 1 39601 72.006 64.176 1 1.9229 2.0674 0 25631000 7421100 18210000 24772 1494 9342 9557 38844 38844 LYGEFADPFK 10 1 0 Unmodified _LYGEFADPFK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.7928 2 593.792589 1185.57063 81324.2 0.73882 0.00043871 -0.13991 -8.3078E-05 0.59891 0.00035563 594.293767479322 598.301140288417 110.45 0.45473 110.45 110.27 110.72 -7.6294E-06 66 24 4 0 0 0 0.049193 1 62912 36.334 32.762 1 1.3804 1.2109 0 1286500 562200 724280 24773 39 9343 9558 38845 38845 LYGLLDPSVFHVK 13 1 0 Unmodified _LYGLLDPSVFHVK_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.2851 3 496.61341 1486.8184 86125.04 0.48402 0.00024037 -0.15831 -7.8618E-05 0.32571 0.00016175 496.613246653495 499.284692578018 112.64 0.70478 112.64 112.3 113.01 0 274 51 7 0 0 0 9.675E-05 2 71121 64.945 64.945 1 0.92382 0.90484 0 21972000 10316000 11656000 24774 2007 9344 9559 38846;38847 38846 LYGLLDPSVFHVK 13 1 0 Unmodified _LYGLLDPSVFHVK_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.2847 3 496.61341 1486.8184 86288.24 0.4872 0.00024195 -0.14195 -7.0495E-05 0.34525 0.00017146 496.613284290428 499.284680867657 111.76 0.68541 111.76 111.45 112.14 -7.6294E-06 255 47 7 0 0 0 0.0005089 2 72131 56.951 56.951 1 0.90269 0.96902 0 21413000 11745000 9668200 24775 2007 9344 9559 38848;38849 38848 LYGLLDPSVFHVK 13 1 0 Unmodified _LYGLLDPSVFHVK_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.6138 3 496.61341 1486.8184 85462.92 0.56278 0.00027948 0.08436 4.1894E-05 0.64714 0.00032138 496.613299068246 499.284777507493 122.62 0.54013 122.62 122.4 122.95 -7.6294E-06 142 26 8 0 0 0 0.0097793 2 73141 33.204 33.204 1 1.0401 0.81132 0 12114000 5347300 6766400 24776 2007 9344 9559 38850;38851 38851 LYGLLDPSVFHVK 13 1 0 Unmodified _LYGLLDPSVFHVK_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 496.6133 3 496.61341 1486.8184 85328.86 0.45406 0.00022549 0.1084 5.3831E-05 0.56246 0.00027933 496.613324447317 499.284889396826 122.39 0.50253 122.39 122.22 122.72 0 135 23 8 0 0 0 0.021473 2 72035 24.964 22.602 1 1.0682 0.85778 0 14688000 7015900 7672100 24777 2007 9344 9559 38852;38853 38853 LYGLQEALEIAR 12 0 1 Unmodified _LYGLQEALEIAR_ 0 0 0 W5ZR30;Q9UGU0;A9JX13 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3871 2 688.382634 1374.75072 73173.49 0.8595 0.00059167 -0.32834 -0.00022602 0.53116 0.00036564 688.383062677964 693.386603309228 112.72 0.55025 112.72 112.46 113.01 0 165 40 6 0 0 0 0.00017181 2 71309 91.584 78.968 1 0.68295 0.71227 0 10535000 5837500 4697100 24778 2100 9345 9560 38854;38855 38855 LYGLQEALEIAR 12 0 1 Unmodified _LYGLQEALEIAR_ 0 0 0 W5ZR30;Q9UGU0;A9JX13 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.3867 2 688.382634 1374.75072 74713.97 0.96668 0.00066545 0.04271 2.9401E-05 1.0094 0.00069485 688.382953673103 693.386446857003 112.12 0.5196 112.12 111.84 112.36 0 138 39 5 0 0 0 7.6188E-07 3 72470 112.36 100.76 1 0.63819 0.62768 0 14367000 8436000 5931200 24779 2100 9345 9560 38856;38857;38858 38857 LYGLQEALEIAR 12 0 1 Unmodified _LYGLQEALEIAR_ 0 0 0 W5ZR30;Q9UGU0;A9JX13 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.3853 2 688.382634 1374.75072 73177.66 0.70738 0.00048695 0.073624 5.0681E-05 0.781 0.00053763 688.383254985845 693.386759844465 124.08 0.76503 124.08 123.81 124.57 0 121 31 6 0 0 0 0.0056981 2 74300 50.284 46.129 1 1.8678 1.5866 0 5238700 2237200 3001500 24780 2100 9345 9560 38859;38860 38860 LYGLQEALEIAR 12 0 1 Unmodified _LYGLQEALEIAR_ 0 0 0 W5ZR30;Q9UGU0;A9JX13 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.8863 2 688.382634 1374.75072 73769.39 0.68421 0.000471 0.46883 0.00032273 1.153 0.00079373 688.383813005483 693.386637395057 123.92 0.80218 123.92 123.64 124.44 7.6294E-06 101 31 6 0 0 0 0.0008083 2 73283 65.5 65.5 1 2.3221 1.9338 0 6268400 2311400 3957000 24781 2100 9345 9560 38861;38862 38862 LYGPTNFAPIINHVAR 16 0 1 Unmodified _LYGPTNFAPIINHVAR_ 0 0 0 H0Y524;Q5JX45;E7ENH5;A6PVH9;Q59EI4;F2Z2V0;B0QZ18;Q99829 H0Y524 H0Y524 CPNE1 Copine-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.3314 3 594.993173 1781.95769 NaN NaN NaN -0.0099985 -5.949E-06 NaN NaN NaN NaN 102.05 0.3015 102.05 101.92 102.22 7.6294E-06 0 0 0 0.0033081 1 62820 47.037 39.836 1 NaN NaN 0 4390200 0 4390200 24782 691 9346 9561 38863 38863 LYGPTNFAPIINHVAR 16 0 1 Unmodified _LYGPTNFAPIINHVAR_ 0 0 0 H0Y524;Q5JX45;E7ENH5;A6PVH9;Q59EI4;F2Z2V0;B0QZ18;Q99829 H0Y524 H0Y524 CPNE1 Copine-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.9932 3 594.993173 1781.95769 85463.79 0.59618 0.00035472 -0.076894 -4.5751E-05 0.51928 0.00030897 594.993066512039 598.663760553068 100.93 0.47441 100.93 100.72 101.19 0 83 36 4 0 0 0 0.0033148 1 63531 33.265 33.265 1 1.0535 1.0464 0 8733300 4400100 4333200 24783 691 9346 9561 38864 38864 LYGPTNFSPIINHVAR 16 0 1 Unmodified _LYGPTNFSPIINHVAR_ 0 0 0 A0A024R994;O75131 A0A024R994 A0A024R994 CPNE3 Copine-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.9951 3 600.324811 1797.9526 NaN NaN NaN 0.715 0.00042923 NaN NaN NaN NaN 95.985 0.79302 95.985 95.482 96.275 -7.6294E-06 0 0 0 0.00096032 1 58311 57.288 57.288 1 NaN NaN 0 12729000 0 12729000 24784 271 9347 9562 38865 38865 LYGPTNFSPIINHVAR 16 0 1 Unmodified _LYGPTNFSPIINHVAR_ 0 0 0 A0A024R994;O75131 A0A024R994 A0A024R994 CPNE3 Copine-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.6621 3 600.324811 1797.9526 77700.89 0.72919 0.00043775 0.44953 0.00026986 1.1787 0.00070762 600.325190583657 603.995469708856 94.666 0.6545 94.666 94.4 95.054 0 190 54 7 0 0 0 6.9533E-05 1 58891 45.614 45.614 1 1.7974 1.8112 0 19511000 7519800 11991000 24785 271 9347 9562 38866 38866 LYGPTNFSPIINHVAR 16 0 1 Unmodified _LYGPTNFSPIINHVAR_ 0 0 0 A0A024R994;O75131 A0A024R994 A0A024R994 CPNE3 Copine-3 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.9361 3 600.324811 1797.9526 79987.09 0.64546 0.00038749 0.47716 0.00028645 1.1226 0.00067394 600.324870797956 603.661225942927 108.35 0.36937 108.35 108.16 108.53 7.6294E-06 51 16 4 0 0 0 0.0024596 1 61320 37.092 37.092 1 0.75242 0.66508 0 3779200 1986600 1792600 24786 271 9347 9562 38867 38867 LYGSAGPPPTGEEDTAEK 18 1 0 Unmodified _LYGSAGPPPTGEEDTAEK_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 913.9321 2 909.923246 1817.83194 65749.89 0.37075 0.00033735 0.01041 9.4724E-06 0.38116 0.00034683 909.923148656405 913.930504760044 43.247 0.46187 43.247 42.912 43.374 0 93 35 4 0 0 0 0.00090192 2 23012 39.424 39.424 1 0.65569 0.68462 0 12186000 6464100 5721600 24787 1466 9348 9563 38868;38869 38868 LYGSAGPPPTGEEDTAEK 18 1 0 Unmodified _LYGSAGPPPTGEEDTAEK_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.4349 2 909.923246 1817.83194 65443.43 0.74769 0.00068034 -0.24958 -0.0002271 0.49811 0.00045324 910.423363347383 913.93051705096 42.415 0.50896 42.415 42.224 42.733 0 155 41 6 0 0 0 4.6497E-05 4 22930 59.116 56.875 1 0.67825 0.69389 0 9362800 5029800 4333000 24788 1466 9348 9563 38870;38871;38872;38873 38871 LYGSAGPPPTGEEDTAEKDEL 21 1 0 Unmodified _LYGSAGPPPTGEEDTAEKDEL_ 0 0 1 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1088.5016 2 1088.50005 2174.98554 58310.94 0.16436 0.0001789 0.1373 0.00014945 0.30166 0.00032835 1089.00142108559 1093.00885805217 72.073 0.51291 72.073 71.806 72.319 0 171 39 6 0 0 0 0.012832 1 41976 32.275 26.616 1 0.77441 0.78774 0 13311000 7141200 6169500 24789 1466 9349 9564 38874 38874 LYGSAGPPPTGEEDTAEKDEL 21 1 0 Unmodified _LYGSAGPPPTGEEDTAEKDEL_ 0 0 1 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1089.0016 2 1088.50005 2174.98554 58667.1 0.0993 0.00010809 0.10269 0.00011177 0.20199 0.00021986 1089.00181663692 1093.008877916 71.008 0.50273 71.008 70.773 71.276 0 173 36 6 0 0 0 7.3775E-05 3 42379 48.112 39.807 1 0.7508 0.76182 0 12845000 7712800 5132500 24790 1466 9349 9564 38875;38876;38877 38877 LYHLLR 6 0 1 Unmodified _LYHLLR_ 0 0 0 Q14137;B2RDN4;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 407.7502 2 407.75033 813.486108 94212.73 -0.53756 -0.00021919 0.48084 0.00019606 -0.056713 -2.3125E-05 407.750353568554 412.754565291173 46.636 0.6601 46.636 46.36 47.02 0 181 40 8 0 0 0 0.062353 1 21930 67.377 12.482 1 1.2324 1.0081 0 13226000 5448400 7777700 24791 1726 9350 9565 38878 38878 LYIAYQFLLAEDTK 14 1 0 Unmodified _LYIAYQFLLAEDTK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.9586 2 844.450714 1686.88687 NaN NaN NaN -0.56797 -0.00047962 NaN NaN NaN NaN 122.39 0.18861 122.39 122.24 122.42 0 0 0 0 0.00065251 1 81152 77.64 67.687 1 NaN NaN 0 3269500 0 3269500 24792 69 9351 9566 38879 38879 LYIAYQFLLAEDTK 14 1 0 Unmodified _LYIAYQFLLAEDTK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.4493 2 844.450714 1686.88687 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.4 1 122.4 121.9 122.9 -7.6294E-06 0 0 0 1.6289E-10 1 81184 108.37 57.105 1 24793 69 9351 9566 38880 38880 LYIAYQFLLAEDTK 14 1 0 Unmodified _LYIAYQFLLAEDTK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.4534 2 844.450714 1686.88687 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.27 1 123.27 122.77 123.77 0 0 0 0 0.0022246 1 81851 65.232 30.008 1 24794 69 9351 9566 38881 38881 LYIAYQFLLAEDTK 14 1 0 Unmodified _LYIAYQFLLAEDTK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 844.9532 2 844.450714 1686.88687 69180.65 1.0378 0.00087636 -0.16771 -0.00014162 0.87007 0.00073473 844.952467897105 848.959175536454 134.47 0.26999 134.47 134.39 134.66 0 36 9 7 0 0 0 0.00015067 1 82144 76.655 76.655 1 1.8423 1.476 0 20923000 10442000 10481000 24795 69 9351 9566 38882 38882 LYIAYQFLLAEDTK 14 1 0 Unmodified _LYIAYQFLLAEDTK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.4588 2 844.450714 1686.88687 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.49 1 134.49 133.99 134.99 0 0 0 0 1.9323E-06 1 82139 97.911 75.378 1 24796 69 9351 9566 38883 38883 LYIAYQFLLAEDTK 14 1 0 Unmodified _LYIAYQFLLAEDTK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.4582 2 844.450714 1686.88687 66736.97 0.78538 0.00066321 -0.40718 -0.00034384 0.37819 0.00031937 844.952065344268 848.457883062549 134.37 0.31433 134.37 134.19 134.5 0 46 13 7 0 0 0 1.5451E-05 2 81165 98.353 92.25 1 2.3647 1.9697 0 40171000 13149000 27023000 24797 69 9351 9566 38884;38885 38884 LYIGNLNESVTPADLEK 17 1 0 Unmodified _LYIGNLNESVTPADLEK_ 0 0 0 Q9NZI8 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.9969 2 938.488556 1874.96256 63512.61 0.54572 0.00051215 -0.26122 -0.00024515 0.2845 0.000267 938.98992633184 942.996798929284 105.8 0.54413 105.8 105.52 106.06 -7.6294E-06 187 41 7 0 0 0 8.7041E-05 1 65464 61.375 61.375 1 2.5989 2.5468 0 21234000 6288200 14946000 24798 2087 9352 9567 38886 38886 LYIGNLNESVTPADLEK 17 1 0 Unmodified _LYIGNLNESVTPADLEK_ 0 0 0 Q9NZI8 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 942.4934 2 938.488556 1874.96256 NaN NaN NaN -0.18671 -0.00017522 NaN NaN NaN NaN 105.18 0.55589 105.18 104.94 105.49 0 0 0 0 2.5471E-09 2 66643 101.32 87.063 1 NaN NaN 0 26176000 0 26176000 24799 2087 9352 9567 38887;38888 38887 LYIGNLNESVTPADLEK 17 1 0 Unmodified _LYIGNLNESVTPADLEK_ 0 0 0 Q9NZI8 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 942.9976 2 938.488556 1874.96256 NaN NaN NaN 0.2913 0.00027338 NaN NaN NaN NaN 117.2 0.39222 117.2 117 117.39 0 0 0 0 1.2145E-06 2 68966 82.202 68.044 1 NaN NaN 0 4573400 0 4573400 24800 2087 9352 9567 38889;38890 38890 LYIGNLNESVTPADLEK 17 1 0 Unmodified _LYIGNLNESVTPADLEK_ 0 0 0 Q9NZI8 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 942.4958 2 938.488556 1874.96256 63369.24 0.63698 0.0005978 0.36512 0.00034266 1.0021 0.00094046 938.991124462579 942.495703307833 117.04 0.5669 117.04 116.86 117.42 -7.6294E-06 88 25 7 0 0 0 2.9056E-07 2 67922 97.463 97.463 1 2.0084 1.639 0 6327100 2382800 3944300 24801 2087 9352 9567 38891;38892 38891 LYIGNLSENAAPSDLESIFK 20 1 0 Unmodified _LYIGNLSENAAPSDLESIFK_ 0 0 0 O00425;F8WD15 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1095.0651 2 1091.05733 2180.10011 NaN NaN NaN 0.38322 0.00041811 NaN NaN NaN NaN 125.66 0.43636 125.66 125.45 125.88 0 0 0 0 2.7033E-10 1 81650 87.18 79.075 1 NaN NaN 0 13071000 0 13071000 24802 1364 9353 9568 38893 38893 LYIGNLSENAAPSDLESIFK 20 1 0 Unmodified _LYIGNLSENAAPSDLESIFK_ 0 0 0 O00425;F8WD15 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1095.5653 2 1091.05733 2180.10011 NaN NaN NaN 0.069205 7.5507E-05 NaN NaN NaN NaN 125.32 0.35745 125.32 125.13 125.49 -7.6294E-06 0 0 0 1.7602E-10 1 83386 89.231 84.053 1 NaN NaN 0 13247000 0 13247000 24803 1364 9353 9568 38894 38894 LYLEQLR 7 0 1 Unmodified _LYLEQLR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.7713 2 467.77146 933.528367 88126.16 0.22112 0.00010344 -0.01744 -8.158E-06 0.20368 9.5278E-05 467.771429829615 472.775396212977 69.708 0.81714 69.708 69.41 70.227 0 309 67 8 0 0 0 0.037563 1 41420 60.788 19.286 1 0.76966 0.87717 0 135530000 75485000 60046000 24804 1389 9354 9569 38895 38895 LYLIDLAGSEDNRR 14 0 2 Unmodified _LYLIDLAGSEDNRR_ 0 0 1 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.2945 3 545.621404 1633.84238 83390.54 0.52602 0.00028701 0.2369 0.00012926 0.76292 0.00041626 545.620892478446 552.294235597898 88.611 0.52232 88.611 88.373 88.895 0 177 44 5 0 0 0 0.0019182 1 54589 40.025 26.906 1 0.76195 0.87347 0 50795000 30122000 20673000 24805 1745 9355 9570 38896 38896 LYLIDLAGSEDNRR 14 0 2 Unmodified _LYLIDLAGSEDNRR_ 0 0 1 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.6207 3 545.621404 1633.84238 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.447 1 88.447 87.947 88.947 0 0 0 0 0.024087 1 54553 40.025 19.072 1 24806 1745 9355 9570 38897 38897 LYLIDLAGSEDNRR 14 0 2 Unmodified _LYLIDLAGSEDNRR_ 0 0 1 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.2951 3 545.621404 1633.84238 79474.7 0.44119 0.00024072 0.34713 0.0001894 0.78831 0.00043012 545.620581066689 552.29408717829 102.04 0.84371 102.04 101.63 102.47 0 205 60 6 0 0 0 0.041997 1 57723 17.219 5.0733 1 1.4432 1.2267 0 7862700 2930200 4932500 24807 1745 9355 9570 38898 38898 LYLIDLAGSEDNRR 14 0 2 Unmodified _LYLIDLAGSEDNRR_ 0 0 1 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.6196 3 545.621404 1633.84238 79982.34 0.4425 0.00024144 -0.1238 -6.7548E-05 0.3187 0.00017389 545.620416167885 552.293840845701 101.75 0.74728 101.75 101.38 102.13 0 227 55 6 0 0 0 0.0019341 2 56771 29.981 22.942 1 1.3796 1.2565 0 7313700 2433800 4879900 24808 1745 9355 9570 38899;38900 38900 LYLINSPVVR 10 0 1 Unmodified _LYLINSPVVR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.3582 2 587.353148 1172.69174 NaN NaN NaN 0.54119 0.00031787 NaN NaN NaN NaN 93.872 0.69327 93.872 93.643 94.336 7.6294E-06 0 0 0 0.005628 1 56936 67.993 48.505 1 NaN NaN 0 19434000 0 19434000 24809 1561 9356 9571 38901 38901 LYLINSPVVR 10 0 1 Unmodified _LYLINSPVVR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.3579 2 587.353148 1172.69174 81616.69 0.82408 0.00048403 0.2572 0.00015107 1.0813 0.00063509 587.854712861599 592.35733979712 93.061 0.64633 93.061 92.705 93.351 0 215 54 6 0 0 0 1.3617E-05 1 57605 102.51 81.993 1 1.7547 1.9124 0 29399000 9048100 20351000 24810 1561 9356 9571 38902 38902 LYLINSPVVR 10 0 1 Unmodified _LYLINSPVVR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.3578 2 587.353148 1172.69174 79960.42 0.65227 0.00038311 0.14039 8.2461E-05 0.79267 0.00046558 587.352980140616 592.357367266109 107.08 0.5347 107.08 106.84 107.37 0 138 32 6 0 0 0 0.004316 1 61246 61.679 48.642 1 0.9168 0.77358 0 4758300 1965000 2793300 24811 1561 9356 9571 38903 38903 LYLINSPVVR 10 0 1 Unmodified _LYLINSPVVR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.3532 2 587.353148 1172.69174 80310.67 0.57441 0.00033738 0.15114 8.8771E-05 0.72554 0.00042615 587.353025086437 592.357303901166 106.88 0.51872 106.88 106.63 107.15 -7.6294E-06 127 30 5 0 0 0 0.0079558 2 60331 56.729 47.313 1 0.83597 0.73513 0 3619600 1787200 1832400 24812 1561 9356 9571 38904;38905 38905 LYLVFSK 7 1 0 Unmodified _LYLVFSK_ 0 0 0 P57740;B3KMK0 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 439.2675 2 435.260197 868.50584 NaN NaN NaN 0.16977 7.3896E-05 NaN NaN NaN NaN 87.072 0.12982 87.072 86.99 87.12 0 0 0 0 0.031658 1 52565 72.138 7.3351 1 NaN NaN 0 9491300 0 9491300 24813 1621 9357 9572 38906 38906 LYLVFSK 7 1 0 Unmodified _LYLVFSK_ 0 0 0 P57740;B3KMK0 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 439.2672 2 435.260197 868.50584 NaN NaN NaN 0.0067483 2.9373E-06 NaN NaN NaN NaN 85.926 0.18713 85.926 85.786 85.973 0 0 0 0 0.030981 1 52962 84.244 7.3971 1 NaN NaN 0 14596000 0 14596000 24814 1621 9357 9572 38907 38907 LYNLFLK 7 1 0 Unmodified _LYNLFLK_ 0 0 0 A0A024R325;Q96I99;Q3ZCW5;E9PDQ8;B7Z2D5 A0A024R325 A0A024R325 SUCLG2 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.7803 2 455.773471 909.53239 98651.08 0.39677 0.00018084 0.066195 3.017E-05 0.46297 0.00021101 455.773234673988 459.780595631105 95.778 0.72561 95.778 95.321 96.047 0 120 59 4 0 0 0 0.034211 1 58165 62.715 36.888 1 2.8487 2.8939 0 6462700 1763300 4699400 24815 126 9358 9573 38908 38908 LYNLFLK 7 1 0 Unmodified _LYNLFLK_ 0 0 0 A0A024R325;Q96I99;Q3ZCW5;E9PDQ8;B7Z2D5 A0A024R325 A0A024R325 SUCLG2 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.781 2 455.773471 909.53239 NaN NaN NaN 0.23302 0.00010621 NaN NaN NaN NaN 94.589 0.54191 94.589 94.34 94.882 -7.6294E-06 0 0 0 0.03113 1 58853 69.432 43.606 1 NaN NaN 0 3891400 0 3891400 24816 126 9358 9573 38909 38909 LYNNHEIR 8 0 1 Unmodified _LYNNHEIR_ 0 0 0 Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 356.8533 3 353.51744 1057.53049 NaN NaN NaN -0.47382 -0.00016751 NaN NaN NaN NaN 19.431 0.47809 19.431 19.336 19.814 0 0 0 0 0.0020238 1 5867 84.568 54.383 1 NaN NaN 0 11139000 0 11139000 24817 864 9359 9574 38910 38910 LYNVVVDTEVTGK 13 1 0 Unmodified _LYNVVVDTEVTGK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.8926 2 718.885207 1435.75586 71022.45 0.7807 0.00056123 -0.012237 -8.7971E-06 0.76846 0.00055244 718.885104633503 722.892243103152 80.913 0.82484 80.913 80.604 81.429 0 474 70 10 0 0 0 1.8934E-23 2 48041 152.7 148.15 1 0.85603 1.0096 0 344800000 175230000 169570000 24818 69 9360 9575 38911;38912 38911 LYNVVVDTEVTGK 13 1 0 Unmodified _LYNVVVDTEVTGK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.8853 2 718.885207 1435.75586 71742.71 0.87395 0.00062827 0.19574 0.00014071 1.0697 0.00076898 718.885288509924 722.892377661037 79.986 0.73454 79.986 79.67 80.404 0 422 59 10 0 0 0 2.0775E-06 2 48524 110.08 110.08 1 0.86125 1.0135 0 390400000 204560000 185830000 24819 69 9360 9575 38913;38914 38914 LYNVVVDTEVTGK 13 1 0 Unmodified _LYNVVVDTEVTGK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.8923 2 718.885207 1435.75586 71866.16 0.71986 0.0005175 0.008056 5.7914E-06 0.72792 0.00052329 718.885235686459 722.892232994205 92.77 0.7155 92.77 92.371 93.087 0 323 41 10 0 0 0 8.5266E-06 2 51524 101.93 97.679 1 1.7705 1.5185 0 79066000 28842000 50224000 24820 69 9360 9575 38915;38916 38915 LYNVVVDTEVTGK 13 1 0 Unmodified _LYNVVVDTEVTGK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.8858 2 718.885207 1435.75586 71417.13 0.43625 0.00031362 0.055182 3.967E-05 0.49144 0.00035329 718.88524593701 722.892267156486 92.596 0.72995 92.596 92.256 92.986 0 336 41 11 0 0 0 0.00011761 2 50634 76.332 76.332 1 1.7697 1.5021 0 69661000 25611000 44050000 24821 69 9360 9575 38917;38918 38918 LYNVVVDTEVTGKK 14 2 0 Unmodified _LYNVVVDTEVTGKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 782.9332 2 782.932688 1563.85082 70441.48 0.69752 0.00054611 0.082662 6.4719E-05 0.78018 0.00061083 782.93252713572 790.946911414719 74.835 0.44505 74.835 74.601 75.046 0 157 32 7 0 0 0 0.002713 2 39775 52.391 44.504 1 1.9092 1.6474 0 5108700 1652300 3456400 24822 69 9361 9576 38919;38920 38920 LYNVVVDTEVTGKK 14 2 0 Unmodified _LYNVVVDTEVTGKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.4339 2 782.932688 1563.85082 69301.87 0.5292 0.00041433 0.10082 7.8936E-05 0.63002 0.00049326 782.932649745749 790.946761428724 75.081 0.50214 75.081 74.823 75.325 0 142 33 8 0 0 0 0.0065455 3 39035 46.352 42.269 1 2.0835 1.7781 0 4909500 1723300 3186200 24823 69 9361 9576 38921;38922;38923 38922 LYNYFYDR 8 0 1 Unmodified _LYNYFYDR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.2694 2 577.269281 1152.52401 79005.59 0.50551 0.00029181 0.14614 8.4362E-05 0.65165 0.00037617 577.269245670909 582.273526285534 73.475 1.3874 73.475 72.972 74.359 0 486 126 5 0 0 0 0.0036078 4 43370 96.253 73.234 1 1.0542 1.1616 0 55040000 26430000 28610000 24824 881;1967 9362 9577 38924;38925;38926;38927 38927 LYNYFYDR 8 0 1 Unmodified _LYNYFYDR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.2746 2 577.269281 1152.52401 78731.24 0.52971 0.00030579 0.12295 7.0978E-05 0.65267 0.00037676 577.269154812073 582.273457814981 72.223 1.1649 72.223 71.8 72.965 0 509 104 6 0 0 0 0.0015831 4 43164 107.66 88.882 1 1.0123 1.17 0 69408000 34986000 34422000 24825 881;1967 9362 9577 38928;38929;38930;38931 38929 LYNYFYDR 8 0 1 Unmodified _LYNYFYDR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.2742 2 577.269281 1152.52401 80471.03 0.42955 0.00024797 0.42692 0.00024645 0.85647 0.00049441 577.269456453187 582.273548374617 83.788 2.0181 83.788 82.969 84.987 0 497 147 6 0 0 0 0.0096168 4 45382 74.127 63.713 1 1.9636 1.6114 0 17096000 5142400 11954000 24826 881;1967 9362 9577 38932;38933;38934;38935 38932 LYNYFYDR 8 0 1 Unmodified _LYNYFYDR_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.2737 2 577.269281 1152.52401 80288.77 0.61128 0.00035287 0.16449 9.4952E-05 0.77577 0.00044783 577.269307763498 582.273444189599 83.957 1.8114 83.957 83.185 84.996 0 508 129 6 0 0 0 0.0073768 2 45087 83.206 67.767 1 1.9466 1.609 0 14667000 4287100 10380000 24827 881;1967 9362 9577 38936;38937 38937 LYPVLQQSLVR 11 0 1 Unmodified _LYPVLQQSLVR_ 0 0 0 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.3911 2 658.390262 1314.76597 76531.32 1.0603 0.00069808 -0.236 -0.00015538 0.82428 0.0005427 658.891556120792 663.394485957478 95.342 0.73863 95.342 95.02 95.759 0 205 62 5 0 0 0 0.020205 1 59269 46.001 46.001 1 0.82488 0.82646 0 18431000 9642700 8788700 24828 1814 9363 9578 38938 38938 LYPVLQQSLVR 11 0 1 Unmodified _LYPVLQQSLVR_ 0 0 0 Q5RKV6 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.8911 2 658.390262 1314.76597 75522.32 0.71539 0.00047101 -0.14634 -9.6346E-05 0.56905 0.00037466 658.390166078451 663.394577925418 109.18 0.61632 109.18 108.93 109.55 0 116 27 6 0 0 0 0.014921 1 61875 54.608 54.608 1 0.96871 0.80555 0 6059800 3040100 3019800 24829 1814 9363 9578 38939 38939 LYQEVEIASVDAFQGR 16 0 1 Unmodified _LYQEVEIASVDAFQGR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;B3KY55 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 912.9604 2 912.959965 1823.90538 64867.86 0.59421 0.00054249 0.71743 0.00065498 1.3116 0.0011975 913.461901659863 918.466586097985 115.51 0.37838 115.51 115.28 115.66 -7.6294E-06 47 17 5 0 0 0 0.012186 1 66752 32.567 26.326 1 0.68696 0.59394 0 1756600 922230 834370 24830 231 9364 9579 38940 38940 LYQGINQLPNVIQALEK 17 1 0 Unmodified _LYQGINQLPNVIQALEK_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;V9H0D5;V9H023;B4DL39;B4DSB9;B4DN49 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 971.046 2 971.043832 1940.07311 62605.98 0.54138 0.0005257 0.44865 0.00043566 0.99003 0.00096136 971.545916014776 975.051354715632 125.66 0.46328 125.66 125.43 125.9 0 171 29 8 0 0 0 7.0084E-05 2 81631 70.089 70.089 1 0.93989 0.97506 0 14805000 7777600 7027200 24831 1237 9365 9580 38941;38942 38942 LYQGINQLPNVIQALEK 17 1 0 Unmodified _LYQGINQLPNVIQALEK_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;V9H0D5;V9H023;B4DL39;B4DSB9;B4DN49 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.5537 2 971.043832 1940.07311 63267.59 0.49057 0.00047636 0.14806 0.00014377 0.63863 0.00062014 971.54547855089 975.051015507447 125.27 0.44987 125.27 125.04 125.49 0 184 31 8 0 0 0 7.3161E-05 2 83366 67.456 67.456 1 0.96552 0.97249 0 16146000 8371800 7774700 24832 1237 9365 9580 38943;38944 38944 LYQHEINLFK 10 1 0 Unmodified _LYQHEINLFK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.5717 3 435.571434 1303.69247 92202.52 -0.04895 -2.1321E-05 0.29126 0.00012686 0.24231 0.00010554 435.571490911657 438.242864760899 71.145 0.88496 71.145 70.766 71.651 0 304 73 6 0 0 0 0.0099412 1 41348 33.89 22.678 1 1.0087 0.99616 0 25366000 12574000 12792000 24833 836;1683 9366 9581 38945 38945 LYQTPLELK 9 1 0 Unmodified _LYQTPLELK_ 0 0 0 P52948;H7C3P6;A0A024RCC4 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.8265 2 552.818607 1103.62266 84581.87 0.63297 0.00034992 -0.28666 -0.00015847 0.34631 0.00019145 552.818303012005 556.825441693787 78.145 0.55901 78.145 77.848 78.407 0 139 45 4 0 0 0 0.0053447 1 46229 73.665 62.799 1 1.4651 1.4457 0 9272100 3561100 5711000 24834 1603 9367 9582 38946 38946 LYQTPLELK 9 1 0 Unmodified _LYQTPLELK_ 0 0 0 P52948;H7C3P6;A0A024RCC4 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.8262 2 552.818607 1103.62266 NaN NaN NaN -0.2405 -0.00013295 NaN NaN NaN NaN 77.012 0.53818 77.012 76.783 77.321 0 0 0 0 0.0050184 1 46512 75.213 61.217 1 NaN NaN 0 7419900 0 7419900 24835 1603 9367 9582 38947 38947 LYQYPNFAGPHAALANK 17 1 0 Unmodified _LYQYPNFAGPHAALANK_ 0 0 0 Q9BY44;C9IZE1;F8WAE5 Q9BY44 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.3282 3 625.656449 1873.94752 78655.94 0.55578 0.00034773 0.10142 6.3455E-05 0.6572 0.00041118 625.990661167947 628.327427160814 86.448 0.63704 86.448 86.012 86.649 -7.6294E-06 78 35 4 0 0 0 0.047484 1 46641 14.959 14.959 1 1.4875 1.2373 0 1559100 662370 896710 24836 2017 9368 9583 38948 38948 LYSILQGDSPTK 12 1 0 Unmodified _LYSILQGDSPTK_ 0 0 0 O15042 O15042 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.3595 2 661.353542 1320.69253 76402.98 0.75464 0.00049909 -0.47363 -0.00031324 0.28101 0.00018585 661.353332731152 665.360167302575 75.766 0.41798 75.766 75.568 75.986 0 92 36 4 0 0 0 0.00021727 1 44661 82.261 70.025 1 1.9216 1.9686 0 10573000 4358800 6214400 24837 1374 9369 9584 38949 38949 LYSLALHPNAFK 12 1 0 Unmodified _LYSLALHPNAFK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.2622 3 458.590717 1372.75032 90350.53 -0.0051959 -2.3828E-06 0.12812 5.8756E-05 0.12293 5.6373E-05 458.590761730481 461.262047009654 81.455 1.1022 81.455 80.797 81.899 0 368 94 6 0 0 0 0.019864 1 48262 22.72 19.854 1 0.61235 0.63718 0 29658000 17890000 11769000 24838 1665 9370 9585 38950 38950 LYSLALHPNAFK 12 1 0 Unmodified _LYSLALHPNAFK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.2622 3 458.590717 1372.75032 89815.84 0.47723 0.00021885 -0.034418 -1.5784E-05 0.44281 0.00020307 458.590637179757 461.262009119063 79.467 0.76665 79.467 79.198 79.964 7.6294E-06 312 63 8 0 0 0 0.00037604 2 48245 51.727 42.533 1 0.64269 0.71306 0 48390000 32216000 16174000 24839 1665 9370 9585 38951;38952 38952 LYSLALHPNAFK 12 1 0 Unmodified _LYSLALHPNAFK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.5964 3 458.590717 1372.75032 88809.61 0.28452 0.00013048 -0.069478 -3.1862E-05 0.21504 9.8616E-05 458.59063452643 461.261895504252 92.569 0.46616 92.569 92.331 92.797 0 114 22 8 0 0 0 0.04733 2 51512 19.843 16.976 1 0.35828 0.28195 0 11061000 7943000 3118400 24840 1665 9370 9585 38953;38954 38954 LYSLALHPNAFK 12 1 0 Unmodified _LYSLALHPNAFK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.3832 2 687.382437 1372.75032 73298.06 0.57147 0.00039282 0.32736 0.00022502 0.89884 0.00061785 687.382728897334 691.89127163026 92.58 0.38315 92.58 92.331 92.714 0 60 18 4 0 0 0 0.01451 1 51566 54.416 54.416 1 0.37975 0.30116 0 4404200 3358900 1045300 24841 1665 9370 9585 38955 38955 LYSLALHPNAFK 12 1 0 Unmodified _LYSLALHPNAFK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 458.5909 3 458.590717 1372.75032 88243.32 -0.13451 -6.1684E-05 0.088314 4.05E-05 -0.046195 -2.1185E-05 458.590731151069 461.262061583967 92.202 0.67601 92.202 91.971 92.647 0 152 34 7 0 0 0 0.021198 1 50422 29.544 24.405 1 0.36034 0.29462 0 8280100 5895000 2385100 24842 1665 9370 9585 38956 38956 LYSLPNPSVLVSLR 14 0 1 Unmodified _LYSLPNPSVLVSLR_ 0 0 0 Q96N67;A0A1B0GWE0 Q96N67 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.4597 2 779.453591 1556.89263 71601.87 0.94583 0.00073723 -0.21628 -0.00016858 0.72956 0.00056866 779.453122355903 784.457491485498 123.03 0.3212 123.03 122.88 123.2 0 94 25 6 0 0 0 0.00016878 1 79714 73.781 73.781 1 1.4175 1.4966 0 4021500 2111300 1910200 24843 1981 9371 9586 38957 38957 LYSLPNPSVLVSLR 14 0 1 Unmodified _LYSLPNPSVLVSLR_ 0 0 0 Q96N67;A0A1B0GWE0 Q96N67 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.4553 2 779.453591 1556.89263 71967.41 0.87354 0.00068088 -0.33325 -0.00025975 0.54029 0.00042113 779.453320266406 784.457416721433 122.55 0.34764 122.55 122.37 122.72 0 92 28 5 0 0 0 0.00020564 2 81298 68.536 68.536 1 1.3961 1.4734 0 3961000 1717400 2243600 24844 1981 9371 9586 38958;38959 38958 LYSPSQIGAFVLMK 14 1 0 Oxidation (M) _LYSPSQIGAFVLM(ox)K_ LYSPSQIGAFVLM(1)K LYSPSQIGAFVLM(74.16)K 0 1 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.9225 2 785.420902 1568.82725 66455.09 0.89825 0.0007055 -0.53318 -0.00041877 0.36506 0.00028673 785.921801721384 789.427733685421 113.36 0.84753 113.36 112.97 113.81 0 366 61 8 0 0 0 8.0472E-05 2 71737 74.162 74.162 1 2.4103 2.6059 0 35553000 11239000 24314000 24845 1092 9372 9587 38960;38961 38961 836 LYSPSQIGAFVLMK 14 1 0 Oxidation (M) _LYSPSQIGAFVLM(ox)K_ LYSPSQIGAFVLM(1)K LYSPSQIGAFVLM(120.06)K 0 1 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.4285 2 785.420902 1568.82725 67442.91 0.77962 0.00061233 -0.13787 -0.00010829 0.64175 0.00050404 785.420812415698 789.42773677455 112.72 0.7545 112.72 112.43 113.18 0 279 50 8 0 0 0 6.9811E-10 2 72890 120.06 120.06 1 2.6736 2.783 0 33861000 10594000 23268000 24846 1092 9372 9587 38962;38963 38962 836 LYSPSQIGAFVLMK 14 1 0 Oxidation (M) _LYSPSQIGAFVLM(ox)K_ LYSPSQIGAFVLM(1)K LYSPSQIGAFVLM(56.55)K 0 1 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.4281 2 785.420902 1568.82725 68602.7 0.76423 0.00060024 -0.042742 -3.3571E-05 0.72149 0.00056667 785.421495822749 789.428490936153 124.78 0.6207 124.78 124.57 125.19 0 145 28 6 0 0 0 0.00050281 1 74773 56.548 52.53 1 0.93227 0.72409 0 3436700 1765500 1671100 24847 1092 9372 9587 38964 38964 836 LYSTIRPYLESK 12 1 1 Unmodified _LYSTIRPYLESK_ 0 0 1 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.6051 3 490.604803 1468.79258 85821.49 0.1992 9.7729E-05 -0.080674 -3.9579E-05 0.11853 5.815E-05 490.604616919511 496.612289476101 64.681 0.74841 64.681 64.287 65.035 0 285 66 6 0 0 0 0.010627 1 38004 34.75 24.698 1 1.2985 1.4955 0 27812000 10430000 17382000 24848 907 9373 9588 38965 38965 LYSVSYLLK 9 1 0 Unmodified _LYSVSYLLK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.3157 2 543.3157 1084.61685 83710.92 0.93579 0.00050843 -0.020767 -1.1283E-05 0.91502 0.00049715 543.315575593927 547.322641477269 98.46 0.77061 98.46 98.072 98.843 0 223 62 6 0 0 0 0.0034791 2 60167 71.692 32.417 1 1.4163 1.4616 0 29028000 13314000 15714000 24849 1504 9374 9589 38966;38967 38967 LYSVSYLLK 9 1 0 Unmodified _LYSVSYLLK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3233 2 543.3157 1084.61685 83003.6 0.59038 0.00032077 -0.54514 -0.00029618 0.045247 2.4583E-05 543.314378459596 547.322711023316 97.429 1.0407 97.429 96.93 97.971 0 278 79 6 0 0 0 0.00048269 2 60822 98.629 39.712 1 1.1436 1.2163 0 36288000 21260000 15028000 24850 1504 9374 9589 38968;38969 38968 LYTEDEFEK 9 1 0 Unmodified _LYTEDEFEK_ 0 0 0 B4DIS6;Q9H6R0;I3L1L6;Q9NPV4;Q05BE5 B4DIS6 B4DIS6 DHX33;DKFZp762F2011 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 591.2763 2 587.269144 1172.52373 80421.98 0.57189 0.00033585 -0.1444 -8.4804E-05 0.42749 0.00025105 587.269207271333 591.276100724593 56.506 0.61963 56.506 56.216 56.836 0 151 37 8 0 0 0 0.008633 1 28516 60.91 44.37 1 1.1754 0.93209 0 4381300 2147900 2233400 24851 983 9375 9590 38970 38970 LYTLQDK 7 1 0 Unmodified _LYTLQDK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.7421 2 440.742368 879.470183 95261.41 0.38034 0.00016763 0.10664 4.7001E-05 0.48698 0.00021463 440.742348880146 444.749440775834 36.384 0.58216 36.384 36.061 36.643 0 158 49 4 0 0 0 0.02687 2 18658 84.244 47.558 1 1.4974 1.6164 0 21838000 7528100 14310000 24852 587 9376 9591 38971;38972 38971 LYTLVTYVPVTTFK 14 1 0 Unmodified _LYTLVTYVPVTTFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;Q76N53 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.9668 2 822.966 1643.91745 66622.29 0.89408 0.00073579 0.078858 6.4898E-05 0.97293 0.00080069 822.96645243073 826.973130467982 120.53 1.4236 120.53 120.2 121.62 0 628 98 12 0 0 0 7.6916E-10 5 77538 122.51 122.51 1 0.78808 0.94536 0 1028700000 577680000 451060000 24853 825 9377 9592 38973;38974;38975;38976;38977 38974 LYTLVTYVPVTTFK 14 1 0 Unmodified _LYTLVTYVPVTTFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;Q76N53 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.4699 2 822.966 1643.91745 NaN NaN NaN -0.2754 -0.00022665 NaN NaN NaN NaN 142.61 0.51549 142.61 142.43 142.94 0 0 0 0 0.0040856 1 90542 74.162 74.162 1 NaN NaN 0 805710 805710 0 24854 825 9377 9592 38978 38978 LYTLVTYVPVTTFK 14 1 0 Unmodified _LYTLVTYVPVTTFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;Q76N53 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.4746 2 822.966 1643.91745 66479.06 1.1498 0.00094621 -0.20651 -0.00016995 0.94325 0.00077627 822.966174168856 826.972876897281 120.04 1.547 120.04 119.68 121.23 -7.6294E-06 690 106 12 0 0 0 9.9197E-15 5 79035 134.75 122.54 1 0.7636 0.9019 0 1174400000 673750000 500650000 24855 825 9377 9592 38979;38980;38981;38982;38983 38980 LYTLVTYVPVTTFK 14 1 0 Unmodified _LYTLVTYVPVTTFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;Q76N53 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.9664 2 822.966 1643.91745 68024.63 0.67659 0.00055681 -0.41878 -0.00034464 0.25781 0.00021217 823.467391808714 827.47390713837 142.64 0.56122 142.64 142.39 142.95 0 190 58 6 0 0 0 0.0077169 2 92095 39.918 39.918 1 0.80374 0.89021 0 1590400 967920 622470 24856 825 9377 9592 38984;38985 38985 LYTLVTYVPVTTFK 14 1 0 Unmodified _LYTLVTYVPVTTFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;Q76N53 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.9678 2 822.966 1643.91745 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.17 1 121.17 120.67 121.67 7.6294E-06 0 0 0 0.0024323 1 80193 81.017 45.505 1 24857 825 9377 9592 38986 38986 LYTLVTYVPVTTFK 14 1 0 Unmodified _LYTLVTYVPVTTFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;Q76N53 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 826.9729 2 822.966 1643.91745 66672.34 1.2844 0.001057 -0.18905 -0.00015558 1.0953 0.00090142 822.966713114759 826.973608306 132.95 1.5461 132.95 132.61 134.16 0 426 68 14 0 0 0 3.2055E-09 5 80749 113.63 104.2 1 0.82257 0.73626 0 506050000 280190000 225860000 24858 825 9377 9592 38987;38988;38989;38990;38991 38988 LYTLVTYVPVTTFK 14 1 0 Unmodified _LYTLVTYVPVTTFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;Q76N53 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 823.4684 2 822.966 1643.91745 67032.07 1.2326 0.0010144 0.064764 5.3298E-05 1.2974 0.0010677 823.467619722549 827.474102705075 134.49 0.53342 134.49 134.02 134.56 0 89 24 5 0 0 0 3.6332E-06 1 82131 101.95 101.95 1 1.0424 0.83153 0 9462100 5055200 4406900 24859 825 9377 9592 38992 38992 LYTLVTYVPVTTFK 14 1 0 Unmodified _LYTLVTYVPVTTFK_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;Q76N53 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 822.9678 2 822.966 1643.91745 67347.43 1.3391 0.0011021 -0.48155 -0.0003963 0.85759 0.00070577 822.966443363611 826.973013190494 132.61 1.9983 132.61 132.16 134.16 0 478 87 13 0 0 0 3.0841E-14 2 79862 128.01 121.57 1 0.89617 0.78365 0 469130000 243440000 225680000 24860 825 9377 9592 38993;38994 38993 LYTSAPNTSQGK 12 1 0 Unmodified _LYTSAPNTSQGK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8201 2 633.819867 1265.62518 75758.99 0.55893 0.00035426 -0.23479 -0.00014881 0.32414 0.00020544 633.819779916354 637.826987991051 24.048 0.63704 24.048 23.642 24.279 0 135 30 8 0 0 0 1.1976E-37 2 9848 179.1 119.5 1 0.94037 1.0615 0 79708000 40950000 38758000 24861 1813 9378 9593 38995;38996 38996 LYTSAPNTSQGK 12 1 0 Unmodified _LYTSAPNTSQGK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3281 2 633.819867 1265.62518 75480.73 0.067553 4.2817E-05 0.078719 4.9894E-05 0.14627 9.271E-05 633.819843573072 637.827082208663 23.858 0.60628 23.858 23.489 24.095 0 107 23 10 0 0 0 8.0644E-18 2 9580 142 100.12 1 0.87863 0.98234 0 105940000 58425000 47512000 24862 1813 9378 9593 38997;38998 38998 LYTSAPNTSQGK 12 1 0 Unmodified _LYTSAPNTSQGK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.8195 2 633.819867 1265.62518 75792.24 0.42944 0.00027218 0.59747 0.00037869 1.0269 0.00065087 633.820046728875 637.827123054466 26.701 0.72068 26.701 26.357 27.078 0 169 34 10 0 0 0 1.7055E-08 1 10148 121.5 107.68 1 1.5284 1.2411 0 27438000 10264000 17174000 24863 1813 9378 9593 38999 38999 LYTSAPNTSQGK 12 1 0 Unmodified _LYTSAPNTSQGK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.8201 2 633.819867 1265.62518 76151.94 0.32232 0.00020429 0.3285 0.00020821 0.65081 0.0004125 633.819919801554 637.827022790312 26.834 0.78077 26.834 26.524 27.304 0 185 35 9 0 0 0 0.00069314 2 9682 67.207 57.692 1 1.529 1.2236 0 21292000 8331900 12960000 24864 1813 9378 9593 39000;39001 39001 LYVGGLSQDISEADLQNQFSR 21 0 1 Unmodified _LYVGGLSQDISEADLQNQFSR_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;F5GWN9;A0A0A0MSJ1;F5H8B8;F5H532;F5H0I5;F5GXV1 A0A024R250 A0A024R250 NOL8 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1171.0764 2 1170.57695 2339.13935 56411.51 0.19784 0.00023159 0.10321 0.00012081 0.30105 0.0003524 1171.07872375057 1175.58064642705 112.59 0.37173 112.59 112.4 112.78 -7.6294E-06 123 26 8 0 0 0 9.3389E-07 2 71107 54.501 54.501 1 1.0005 1.0373 0 20582000 9162600 11419000 24865 104 9379 9594 39002;39003 39003 LYVGGLSQDISEADLQNQFSR 21 0 1 Unmodified _LYVGGLSQDISEADLQNQFSR_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;F5GWN9;A0A0A0MSJ1;F5H8B8;F5H532;F5H0I5;F5GXV1 A0A024R250 A0A024R250 NOL8 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1175.5823 2 1170.57695 2339.13935 56323.66 0.37853 0.0004431 -0.025488 -2.9836E-05 0.35304 0.00041326 1171.07829477165 1176.08251427603 112.08 0.34388 112.08 111.92 112.26 0 113 26 6 0 0 0 1.0688E-08 3 72402 82.908 77.924 1 1.0846 1.0797 0 16415000 7637800 8777500 24866 104 9379 9594 39004;39005;39006 39005 LYVGGLSQDISEADLQNQFSR 21 0 1 Unmodified _LYVGGLSQDISEADLQNQFSR_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;F5GWN9;A0A0A0MSJ1;F5H8B8;F5H532;F5H0I5;F5GXV1 A0A024R250 A0A024R250 NOL8 Nucleolar protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1176.083 2 1170.57695 2339.13935 55596.96 0.19799 0.00023176 -0.032614 -3.8178E-05 0.16537 0.00019358 1171.07870557153 1176.08255900038 123.72 0.43575 123.72 123.53 123.97 -7.6294E-06 108 18 9 0 0 0 8.5134E-08 2 73944 69.331 64.44 1 1.3262 1.0888 0 12057000 4968900 7088600 24867 104 9379 9594 39007;39008 39007 LYVGGLSQDISEADLQNQFSR 21 0 1 Unmodified _LYVGGLSQDISEADLQNQFSR_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;F5GWN9;A0A0A0MSJ1;F5H8B8;F5H532;F5H0I5;F5GXV1 A0A024R250 A0A024R250 NOL8 Nucleolar protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1171.078 2 1170.57695 2339.13935 55156.14 0.33845 0.00039619 0.10445 0.00012227 0.44291 0.00051846 1171.07904830105 1176.08239889086 123.6 0.42977 123.6 123.46 123.89 0 95 16 10 0 0 0 1.446E-07 2 73044 63.462 63.462 1 1.3089 1.0565 0 10895000 4867100 6028200 24868 104 9379 9594 39009;39010 39010 LYVHEAVK 8 1 0 Unmodified _LYVHEAVK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 322.8547 3 320.183399 957.528367 104638.9 -0.15763 -5.0472E-05 -0.1229 -3.9351E-05 -0.28053 -8.9823E-05 320.183370436839 322.854656940122 24.954 0.42066 24.954 24.793 25.214 0 89 21 7 0 0 0 0.037047 2 10591 24.121 15.209 1 1.8102 1.9795 0 51448000 13490000 37958000 24869 1754 9380 9595 39011;39012 39011 LYVHEAVK 8 1 0 Unmodified _LYVHEAVK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.7788 2 479.77146 957.528367 86619.43 -0.18368 -8.8125E-05 0.14715 7.0598E-05 -0.036531 -1.7526E-05 479.771513638024 483.778639447211 24.954 0.32025 24.954 24.793 25.113 0 73 17 7 0 0 0 0.0095922 1 10614 74.184 34.081 1 2.1043 2.369 0 73342000 27152000 46189000 24870 1754 9380 9595 39013 39013 LYVHEAVK 8 1 0 Unmodified _LYVHEAVK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.7784 2 479.77146 957.528367 88672.84 0.17313 8.3061E-05 -0.051114 -2.4523E-05 0.12201 5.8538E-05 479.771331137124 483.778469207626 27.428 0.3585 27.428 27.256 27.615 0 56 15 5 0 0 0 0.032472 1 10659 50.607 14.727 1 2.8038 2.181 0 3678000 1094400 2583700 24871 1754 9380 9595 39014 39014 LYVWDLEVEDPHK 13 1 0 Unmodified _LYVWDLEVEDPHK_ 0 0 0 O75530;E9PJK2;H0YEL4;E9PMU3 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.2753 3 548.275234 1641.80387 83315.36 0.51174 0.00028057 0.050764 2.7833E-05 0.5625 0.00030841 548.275096736105 550.94665764411 99.621 0.77927 99.621 99.289 100.07 0 248 64 6 0 0 0 0.00093847 1 60939 40.066 40.066 1 0.90091 0.88678 0 19795000 9482100 10313000 24872 1407 9381 9596 39015 39015 LYYDTDYGSK 10 1 0 Unmodified _LYYDTDYGSK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.7751 2 612.774593 1223.53463 78617.27 0.19326 0.00011843 0.14431 8.8431E-05 0.33757 0.00020686 612.774555768957 616.781557284295 45.693 0.74156 45.693 45.314 46.055 0 271 66 6 0 0 0 0.00013082 2 24592 96.331 90.99 1 0.98744 1.0636 0 40929000 20451000 20477000 24873 2063 9382 9597 39016;39017 39017 LYYDTDYGSK 10 1 0 Unmodified _LYYDTDYGSK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.7751 2 612.774593 1223.53463 78124.29 0.62148 0.00038083 0.39162 0.00023998 1.0131 0.0006208 612.774588854438 616.781692074794 44.721 0.69313 44.721 44.455 45.148 0 200 54 7 0 0 0 0.00060252 2 24442 84.213 78.899 1 0.97829 1.1028 0 61004000 30445000 30559000 24874 2063 9382 9597 39018;39019 39019 LYYDTDYGSK 10 1 0 Unmodified _LYYDTDYGSK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.7753 2 612.774593 1223.53463 78288.52 0.30075 0.00018429 0.13717 8.4052E-05 0.43791 0.00026834 612.77464395974 616.78161467761 52.959 1.1069 52.959 52.567 53.674 0 374 85 7 0 0 0 0.010853 2 26211 53.327 52.483 1 1.3629 1.0633 0 12102000 5064200 7037500 24875 2063 9382 9597 39020;39021 39020 LYYDTDYGSK 10 1 0 Unmodified _LYYDTDYGSK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.7747 2 612.774593 1223.53463 78776.8 0.32121 0.00019683 0.10257 6.2853E-05 0.42378 0.00025968 612.774623177125 616.781626493847 53.512 0.87761 53.512 53.116 53.993 0 366 61 8 0 0 0 0.009516 2 25958 54.608 52.422 1 1.3127 1.0789 0 9768900 4220700 5548200 24876 2063 9382 9597 39022;39023 39023 LYYFQYPCYQEGLR 14 0 1 Unmodified _LYYFQYPCYQEGLR_ 0 0 0 M4VP52;Q59GY0;Q9NRW3 M4VP52 M4VP52 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 950.941 2 950.440354 1898.86616 63945.08 0.78476 0.00074587 -0.69415 -0.00065975 0.090615 8.6124E-05 950.941516492579 955.945470387951 104.61 0.48274 104.61 104.35 104.83 7.6294E-06 98 40 5 0 0 0 0.0015639 2 64644 52.79 52.79 1 0.58258 0.58209 0 8839700 4985700 3854100 24877 1357 9383 9598 39024;39025 39025 LYYFQYPCYQEGLR 14 0 1 Unmodified _LYYFQYPCYQEGLR_ 0 0 0 M4VP52;Q59GY0;Q9NRW3 M4VP52 M4VP52 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 955.4475 2 950.440354 1898.86616 63242.41 0.42731 0.00040613 -0.73918 -0.00070255 -0.31187 -0.00029642 950.439089798455 955.44444517067 103.88 0.52005 103.88 103.59 104.11 0 123 46 6 0 0 0 0.0013094 1 65725 54.608 52.551 1 0.56489 0.564 0 11560000 7274600 4285400 24878 1357 9383 9598 39026 39026 LYYFQYPCYQEGLR 14 0 1 Unmodified _LYYFQYPCYQEGLR_ 0 0 0 M4VP52;Q59GY0;Q9NRW3 M4VP52 M4VP52 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 955.9478 2 950.440354 1898.86616 61135.08 0.89239 0.00084816 0.40534 0.00038525 1.2977 0.0012334 950.941473114567 955.444859892915 115.89 0.41718 115.89 115.7 116.12 0 68 16 7 0 0 0 0.00049381 1 67987 60.434 55.155 1 0.61784 0.53147 0 6941400 3394800 3546600 24879 1357 9383 9598 39027 39027 LYYFQYPCYQEGLR 14 0 1 Unmodified _LYYFQYPCYQEGLR_ 0 0 0 M4VP52;Q59GY0;Q9NRW3 M4VP52 M4VP52 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 950.9412 2 950.440354 1898.86616 63223.74 0.66025 0.00062753 -0.80096 -0.00076127 -0.14072 -0.00013374 950.439361996955 955.44400705865 115.74 0.43761 115.74 115.55 115.98 -7.6294E-06 90 20 7 0 0 0 0.0038759 3 66995 46.406 41.328 1 0.4702 0.39063 0 7649500 5304000 2345500 24880 1357 9383 9598 39028;39029;39030 39029 MAAENSEEGNTCIIPQR 17 0 1 Oxidation (M) _M(ox)AAENSEEGNTCIIPQR_ M(1)AAENSEEGNTCIIPQR M(53.97)AAENSEEGNTCIIPQR 0 1 0 A0A1B0GUH9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 968.4294 2 968.430389 1934.84622 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.177 1 49.177 48.677 49.677 0 0 0 0 0.0013502 1 26946 53.967 45.237 1 24881 630 9384 9599 39031 39031 489 MAEAGFIHCPTENEPDLAQCFFCFK 25 1 0 Oxidation (M) _M(ox)AEAGFIHCPTENEPDLAQCFFCFK_ M(1)AEAGFIHCPTENEPDLAQCFFCFK M(83.9)AEAGFIHCPTENEPDLAQCFFCFK 0 1 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2;A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8;K7EP76;K7ELG2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1013.1021 3 1012.43254 3034.27581 60240.06 0.73319 0.0007423 -0.68229 -0.00069077 0.0509 5.1533E-05 1012.76658519589 1015.43796874126 117.14 0.59214 117.14 116.87 117.47 0 406 42 12 0 0 0 7.654E-14 2 74846 83.905 83.905 1 0.9128 1.0085 0 57032000 30060000 26972000 24882 498 9385 9600 39032;39033 39032 344 MAEAGFIHCPTENEPDLAQCFFCFK 25 1 0 Oxidation (M) _M(ox)AEAGFIHCPTENEPDLAQCFFCFK_ M(1)AEAGFIHCPTENEPDLAQCFFCFK M(81.7)AEAGFIHCPTENEPDLAQCFFCFK 0 1 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2;A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8;K7EP76;K7ELG2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1012.7684 3 1012.43254 3034.27581 60187.52 0.33912 0.00034333 -0.24239 -0.00024541 0.096723 9.7926E-05 1012.76712462026 1015.77249654613 116.55 0.57295 116.55 116.33 116.9 0 313 35 12 0 0 0 1.2432E-13 2 76237 81.696 81.655 1 0.85769 0.96633 0 68683000 37404000 31280000 24883 498 9385 9600 39034;39035 39034 344 MAEAGFIHCPTENEPDLAQCFFCFK 25 1 0 Oxidation (M) _M(ox)AEAGFIHCPTENEPDLAQCFFCFK_ M(1)AEAGFIHCPTENEPDLAQCFFCFK M(48.69)AEAGFIHCPTENEPDLAQCFFCFK 0 1 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2;A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8;K7EP76;K7ELG2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1012.7688 3 1012.43254 3034.27581 60174.87 0.6968 0.00070546 -0.61466 -0.0006223 0.082144 8.3165E-05 1013.10063115728 1015.43818688157 128.77 0.60999 128.77 128.53 129.14 0 258 27 14 0 0 0 3.8585E-07 1 77739 48.685 47.933 1 0.95674 0.78278 0 34855000 17889000 16966000 24884 498 9385 9600 39036 39036 344 MAEAGFIHCPTENEPDLAQCFFCFK 25 1 0 Oxidation (M) _M(ox)AEAGFIHCPTENEPDLAQCFFCFK_ M(1)AEAGFIHCPTENEPDLAQCFFCFK M(57.58)AEAGFIHCPTENEPDLAQCFFCFK 0 1 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2;A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8;K7EP76;K7ELG2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1015.7727 3 1012.43254 3034.27581 60220.27 0.51946 0.00052592 -0.4924 -0.00049853 0.027057 2.7394E-05 1012.76692169656 1015.43825295031 128.58 0.72522 128.58 128.32 129.05 0 267 28 14 0 0 0 9.0747E-10 2 76704 57.578 56.826 1 0.92878 0.7695 0 34417000 17579000 16837000 24885 498 9385 9600 39037;39038 39038 344 MAEAGFIHCPTENEPDLAQCFFCFK 25 1 0 Unmodified _MAEAGFIHCPTENEPDLAQCFFCFK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2;A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8;K7EP76;K7ELG2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1010.1068 3 1007.10091 3018.28089 61116.71 0.32618 0.0003285 -0.39616 -0.00039897 -0.06997 -7.0467E-05 1007.43509516755 1010.44041660879 131.06 0.45158 131.06 130.87 131.32 0 157 19 12 0 0 0 6.6913E-06 2 79477 37.209 36.44 1 1.4624 1.137 0 12533000 5387000 7146100 24886 498 9385 9601 39039;39040 39039 MAEAGFIHCPTENEPDLAQCFFCFK 25 1 0 Unmodified _MAEAGFIHCPTENEPDLAQCFFCFK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2;A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8;K7EP76;K7ELG2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1007.4355 3 1007.10091 3018.28089 60730.89 0.57215 0.00057621 -0.51186 -0.00051549 0.060293 6.0721E-05 1007.43552609055 1010.10633976939 130.85 0.48178 130.85 130.63 131.11 0 177 21 11 0 0 0 0.0009041 1 78416 26.5 26.5 1 1.4164 1.1375 0 14899000 6401100 8497700 24887 498 9385 9601 39041 39041 MAEIGEHVAPSEAANSLEQAQAAAER 26 0 1 Oxidation (M) _M(ox)AEIGEHVAPSEAANSLEQAQAAAER_ M(1)AEIGEHVAPSEAANSLEQAQAAAER M(83.88)AEIGEHVAPSEAANSLEQAQAAAER 0 1 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.425 3 899.4242 2695.25077 63662.19 0.71122 0.00063969 -0.24154 -0.00021725 0.46968 0.00042244 899.7582969368 902.760105042019 77.814 0.35318 77.814 77.637 77.991 0 142 29 7 0 0 0 3.4952E-14 4 47118 83.881 83.881 1 1.1194 1.1107 0 15942000 6748200 9194000 24888 1259 9386 9602 39042;39043;39044;39045 39044 963 MAGDPVANVR 10 0 1 Oxidation (M) _M(ox)AGDPVANVR_ M(1)AGDPVANVR M(63.22)AGDPVANVR 0 1 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;E9PH38;B4E1Q0 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.2624 2 523.258391 1044.50223 84936.5 0.57201 0.00029931 -0.62891 -0.00032908 -0.0569 -2.9773E-05 523.258371580702 528.262381329165 28.803 0.33462 28.803 28.669 29.003 0 58 17 5 0 0 0 0.0018044 2 13742 63.216 41.184 1 1.6012 1.6221 0 18038000 6825300 11213000 24889 723 9387 9603 39046;39047 39046 558 MAGIDDCYTSAR 12 0 1 Oxidation (M) _M(ox)AGIDDCYTSAR_ M(1)AGIDDCYTSAR M(93.1)AGIDDCYTSAR 0 1 0 Q8NI62 Q8NI62 Q8NI62 OK/KNS-cl.6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.2878 2 688.284476 1374.5544 73797.7 0.56282 0.00038738 -0.17133 -0.00011792 0.39149 0.00026946 688.284767681541 693.288396137134 35.401 0.48199 35.401 35.13 35.612 0 175 42 6 0 0 0 7.0737E-05 2 17677 93.096 86.791 1 0.74004 0.73909 0 16728000 7643300 9084700 24890 1930 9388 9604 39048;39049 39049 1767 MAGIDDCYTSAR 12 0 1 Oxidation (M) _M(ox)AGIDDCYTSAR_ M(1)AGIDDCYTSAR M(65.5)AGIDDCYTSAR 0 1 0 Q8NI62 Q8NI62 Q8NI62 OK/KNS-cl.6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.7864 2 688.284476 1374.5544 75212.88 0.78828 0.00054256 -0.23568 -0.00016222 0.5526 0.00038035 688.284651979091 693.288392579316 34.766 0.483 34.766 34.505 34.988 3.8147E-06 153 40 5 0 0 0 0.00039161 2 17525 65.5 62.561 1 0.84379 0.84655 0 17456000 6454300 11002000 24891 1930 9388 9604 39050;39051 39051 1767 MAGIDDCYTSAR 12 0 1 Oxidation (M) _M(ox)AGIDDCYTSAR_ M(1)AGIDDCYTSAR M(57.35)AGIDDCYTSAR 0 1 0 Q8NI62 Q8NI62 Q8NI62 OK/KNS-cl.6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.2901 2 688.284476 1374.5544 73855.55 0.36972 0.00025447 0.28583 0.00019673 0.65555 0.0004512 688.284599604639 693.288875792782 40.777 0.64085 40.777 40.545 41.186 0 181 52 4 0 0 0 0.0014176 2 18983 57.348 57.348 1 0.75555 0.65635 0 2252200 1346100 906070 24892 1930 9388 9604 39052;39053 39053 1767 MAGIDDCYTSAR 12 0 1 Oxidation (M) _M(ox)AGIDDCYTSAR_ M(1)AGIDDCYTSAR M(49.5)AGIDDCYTSAR 0 1 0 Q8NI62 Q8NI62 Q8NI62 OK/KNS-cl.6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.7896 2 688.284476 1374.5544 75017.41 0.26138 0.0001799 0.3 0.00020649 0.56138 0.00038639 688.284564057454 693.289006715164 41.224 0.74963 41.224 40.792 41.541 0 212 59 4 0 0 0 0.0029313 1 18392 49.5 49.5 1 0.77228 0.67901 0 1866100 983120 882980 24893 1930 9388 9604 39054 39054 1767 MAGIDDCYTSAR 12 0 1 Unmodified _MAGIDDCYTSAR_ 0 0 0 Q8NI62 Q8NI62 Q8NI62 OK/KNS-cl.6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.2874 2 680.287019 1358.55949 74399.38 0.7795 0.00053029 0.27021 0.00018382 1.0497 0.0007141 680.287493366753 685.290931637543 49.352 0.40057 49.352 49.081 49.482 3.8147E-06 70 27 4 0 0 0 0.0041381 1 27140 54.259 52.215 1 0.88744 0.91695 0 13910000 8056400 5853200 24894 1930 9388 9605 39055 39055 MAGIDDCYTSAR 12 0 1 Unmodified _MAGIDDCYTSAR_ 0 0 0 Q8NI62 Q8NI62 Q8NI62 OK/KNS-cl.6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.2914 2 680.287019 1358.55949 73967.48 0.64111 0.00043614 -0.7194 -0.0004894 -0.078291 -5.326E-05 680.286611493026 685.290883284207 57.078 0.62749 57.078 56.818 57.446 0 198 46 6 0 0 0 0.0041381 1 28867 54.259 52.848 1 0.96781 0.82623 0 5697300 2640900 3056400 24895 1930 9388 9605 39056 39056 MAGIDDCYTSAR 12 0 1 Unmodified _MAGIDDCYTSAR_ 0 0 0 Q8NI62 Q8NI62 Q8NI62 OK/KNS-cl.6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.2916 2 680.287019 1358.55949 74209.53 0.61767 0.00042019 -0.67916 -0.00046202 -0.061487 -4.1829E-05 680.28678636536 685.290885400891 57.817 0.62166 57.817 57.471 58.092 0 223 44 7 0 0 0 0.0039322 1 28580 54.784 53.712 1 0.99415 0.87899 0 3904300 2231000 1673300 24896 1930 9388 9605 39057 39057 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M) _M(ox)AIM(ox)VQSPM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK M(125.22)AIM(125.22)VQSPM(125.22)FDGK 0 3 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.8453 2 751.83803 1501.66151 70261.4 0.30249 0.00022743 -0.92865 -0.0006982 -0.62616 -0.00047077 751.838181231677 755.844988804064 66.403 0.7554 66.403 66.025 66.78 0 281 63 6 0 0 0 1.8537E-11 1 38243 125.22 122.7 1 1.4068 1.3777 0 22152000 7652800 14499000 24897 139 9389 9606 39058 39058 121;122;123 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M) _M(ox)AIM(ox)VQSPM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK M(96.11)AIM(96.11)VQSPM(96.11)FDGK 0 3 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.8386 2 751.83803 1501.66151 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.854 1 65.854 65.354 66.354 0 0 0 0 4.453E-07 1 37953 96.113 69.441 1 24898 139 9389 9606 39059 39059 121;122;123 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M) _M(ox)AIM(ox)VQSPM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK M(110.39)AIM(110.39)VQSPM(110.39)FDGK 0 3 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.8383 2 751.83803 1501.66151 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.734 1 64.734 64.234 65.234 0 0 0 0 2.918E-11 1 38126 110.39 88.924 1 24899 139 9389 9606 39060 39060 121;122;123 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M) _M(ox)AIM(ox)VQSPM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK M(78.66)AIM(78.66)VQSPM(78.66)FDGK 0 3 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.8393 2 751.83803 1501.66151 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.974 1 64.974 64.474 65.474 0 0 0 0 0.00012782 1 38299 78.655 58.893 1 24900 139 9389 9606 39061 39061 121;122;123 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M) _M(ox)AIM(ox)VQSPM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK M(50.45)AIM(50.45)VQSPM(50.45)FDGK 0 3 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.8375 2 751.83803 1501.66151 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.305 1 75.305 74.805 75.805 0 0 0 0 0.0021014 1 40059 50.452 38.497 1 24901 139 9389 9606 39062 39062 121;122;123 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M) _M(ox)AIM(ox)VQSPM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK M(70.94)AIM(70.94)VQSPM(70.94)FDGK 0 3 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.8389 2 751.83803 1501.66151 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.546 1 75.546 75.046 76.046 0 0 0 0 0.00022222 1 40211 70.942 60.184 1 24902 139 9389 9606 39063 39063 121;122;123 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M) _M(ox)AIM(ox)VQSPM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK M(58.63)AIM(58.63)VQSPM(58.63)FDGK 0 3 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.839 2 751.83803 1501.66151 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.767 1 75.767 75.267 76.267 0 0 0 0 0.00066403 1 39519 58.63 50.166 1 24903 139 9389 9606 39064 39064 121;122;123 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M) _M(ox)AIM(ox)VQSPM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK M(44.43)AIM(44.43)VQSPM(44.43)FDGK 0 3 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.8384 2 751.83803 1501.66151 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.308 1 76.308 75.808 76.808 -7.6294E-06 0 0 0 0.003578 1 39872 44.425 36.382 1 24904 139 9389 9606 39065 39065 121;122;123 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M) _M(ox)AIM(ox)VQSPM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK M(62.3)AIM(62.3)VQSPM(62.3)FDGK 0 3 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.8391 2 751.83803 1501.66151 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.602 1 76.602 76.102 77.102 0 0 0 0 0.00052498 1 40066 62.303 50.813 1 24905 139 9389 9606 39066 39066 121;122;123 MAKPEEVLVVENDQGEVVR 19 1 1 Oxidation (M) _M(ox)AKPEEVLVVENDQGEVVR_ M(1)AKPEEVLVVENDQGEVVR M(99.89)AKPEEVLVVENDQGEVVR 0 1 1 O14980;B3KWD0;B7ZB16;B4DR01 O14980 O14980 XPO1 Exportin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.043 3 719.700054 2156.07833 NaN NaN NaN -0.012408 -8.9298E-06 NaN NaN NaN NaN 69.799 0.43408 69.799 69.569 70.003 0 0 0 0 2.2136E-13 1 41560 99.891 79.8 1 NaN NaN 0 5517400 0 5517400 24906 1371 9390 9607 39067 39067 1036 MALDIEIATYR 11 0 1 Oxidation (M) _M(ox)ALDIEIATYR_ M(1)ALDIEIATYR M(142.43)ALDIEIATYR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;H7C5W5;B3KWQ6;P41219 V9HWE1 V9HWE1 HEL113;VIM;PRPH Vimentin;Peripherin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.3389 2 656.334295 1310.65404 73357.31 0.69765 0.00045789 0.24785 0.00016267 0.9455 0.00062056 656.334241749749 661.338691720463 92.572 0.66349 92.572 92.425 93.089 -7.6294E-06 295 60 7 0 0 0 8.9899E-13 1 56114 142.43 85.996 1 1.6053 1.7113 0 43857000 16896000 26961000 24907 1457 9391 9608 39068 39068 1175 MALDIEIATYR 11 0 1 Oxidation (M) _M(ox)ALDIEIATYR_ M(1)ALDIEIATYR M(108.67)ALDIEIATYR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;H7C5W5;B3KWQ6;P41219 V9HWE1 V9HWE1 HEL113;VIM;PRPH Vimentin;Peripherin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.3403 2 656.334295 1310.65404 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.511 1 91.511 91.011 92.011 0 0 0 0 5.9023E-09 1 56649 108.67 56.672 1 24908 1457 9391 9608 39069 39069 1175 MALDIEIATYR 11 0 1 Oxidation (M) _M(ox)ALDIEIATYR_ M(1)ALDIEIATYR M(68.89)ALDIEIATYR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;H7C5W5;B3KWQ6;P41219 V9HWE1 V9HWE1 HEL113;VIM;PRPH Vimentin;Peripherin MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.3404 2 656.334295 1310.65404 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.43 1 105.43 104.93 105.93 0 0 0 0 0.00081545 1 59283 68.893 36.959 1 24909 1457 9391 9608 39070 39070 1175 MALELLTQEFGIPIER 16 0 1 Oxidation (M) _M(ox)ALELLTQEFGIPIER_ M(1)ALELLTQEFGIPIER M(83.09)ALELLTQEFGIPIER 0 1 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.7921 2 938.497869 1874.98119 64267.25 0.88963 0.00083491 0.092852 8.7142E-05 0.98248 0.00092206 938.999370631124 944.003597451173 128.75 0.14426 128.75 128.65 128.79 0 34 6 7 0 0 0 6.6224E-09 1 83966 83.087 83.087 1 4.0919 4.1889 0 10040000 1407300 8632800 24910 1583 9392 9609 39071 39071 1367 MALELLTQEFGIPIER 16 0 1 Oxidation (M) _M(ox)ALELLTQEFGIPIER_ M(1)ALELLTQEFGIPIER M(122.45)ALELLTQEFGIPIER 0 1 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.5059 2 938.497869 1874.98119 64449.77 0.66644 0.00062545 0.97859 0.00091841 1.645 0.0015439 939.001393837131 944.004243962625 128.38 0.19774 128.38 128.23 128.43 0 37 12 7 0 0 0 2.9186E-19 1 85836 122.45 122.45 1 5.7218 5.7392 0 17611000 4907600 12704000 24911 1583 9392 9609 39072 39072 1367 MALIMEPVSK 10 1 0 2 Oxidation (M) _M(ox)ALIM(ox)EPVSK_ M(1)ALIM(1)EPVSK M(44.39)ALIM(44.39)EPVSK 0 2 0 Q8WXI2 Q8WXI2 Q8WXI2 CNKSR2 Connector enhancer of kinase suppressor of ras 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.7963 2 575.79596 1149.57737 79250.52 -0.0043973 -2.532E-06 0.94499 0.00054412 0.94059 0.00054159 575.796286094072 579.803396556587 18.73 0.44936 18.73 18.476 18.925 0 75 26 4 0 0 0 0.031096 1 5543 44.395 15.019 1 0.82132 0.81488 0 25975000 14466000 11510000 24912 1943 9393 9610 39073 39073 1786;1787 MALNHPYFNDLDNQIK 16 1 0 Oxidation (M) _M(ox)ALNHPYFNDLDNQIK_ M(1)ALNHPYFNDLDNQIK M(94.01)ALNHPYFNDLDNQIK 0 1 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.3187 3 650.312242 1947.9149 74343.46 0.85343 0.00055499 -0.12133 -7.8901E-05 0.7321 0.00047609 650.646681229726 653.318191838475 76.017 0.8732 76.017 75.709 76.582 0 395 71 8 0 0 0 4.8753E-07 1 44702 94.007 87.279 1 1.5774 1.726 0 51785000 22390000 29395000 24913 25 9394 9611 39074 39074 12 MALNHPYFNDLDNQIK 16 1 0 Oxidation (M) _M(ox)ALNHPYFNDLDNQIK_ M(1)ALNHPYFNDLDNQIK M(98.51)ALNHPYFNDLDNQIK 0 1 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.647 3 650.312242 1947.9149 74591.27 0.7124 0.00046328 0.0669 4.3506E-05 0.7793 0.00050679 650.646638085719 652.983733213238 74.634 0.7784 74.634 74.375 75.153 0 421 68 8 0 0 0 1.2905E-07 2 45022 98.508 90.594 1 1.4725 1.6452 0 88732000 36830000 51902000 24914 25 9394 9611 39075;39076 39076 12 MALNHPYFNDLDNQIK 16 1 0 Oxidation (M) _M(ox)ALNHPYFNDLDNQIK_ M(1)ALNHPYFNDLDNQIK M(53.17)ALNHPYFNDLDNQIK 0 1 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.3182 3 650.312242 1947.9149 74434.16 0.60855 0.00039575 0.0019918 1.2953E-06 0.61054 0.00039704 650.646616991329 652.983899800886 86.998 0.64996 86.998 86.709 87.359 0 218 39 8 0 0 0 8.7196E-05 1 47000 53.169 53.169 1 1.0615 0.86786 0 5550300 2691000 2859300 24915 25 9394 9611 39077 39077 12 MALTLLDYLFHR 12 0 1 Oxidation (M) _M(ox)ALTLLDYLFHR_ M(1)ALTLLDYLFHR M(49.06)ALTLLDYLFHR 0 1 0 A0A0S2Z696;B3KM38;A0A0S2Z5C2;A0A0S2Z5G4;B4DE54;A0A0S2Z5M2;Q8N9N5 A0A0S2Z696 A0A0S2Z696 BANP Protein BANP MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.9044 2 754.900137 1507.78572 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.09 1 127.09 126.59 127.59 -7.6294E-06 0 0 0 0.011097 1 84825 49.06 32.389 1 24916 579 9395 9612 39078 39078 432 MANVLDEPGQDLEADFPK 18 1 0 Oxidation (M) _M(ox)ANVLDEPGQDLEADFPK_ M(1)ANVLDEPGQDLEADFPK M(65.18)ANVLDEPGQDLEADFPK 0 1 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1002.9633 2 1002.96459 2003.91462 NaN NaN NaN -1.1237 -0.0011271 NaN NaN NaN NaN 103.76 0.49854 103.76 103.55 104.05 0 0 0 0 4.9111E-05 1 64074 65.179 59.334 1 NaN NaN 0 4692500 4692500 0 24917 681 9396 9613 39079 39079 528 MANVLDEPGQDLEADFPK 18 1 0 Oxidation (M) _M(ox)ANVLDEPGQDLEADFPK_ M(1)ANVLDEPGQDLEADFPK M(58.67)ANVLDEPGQDLEADFPK 0 1 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1002.9657 2 1002.96459 2003.91462 NaN NaN NaN -0.99264 -0.00099558 NaN NaN NaN NaN 103.2 0.29467 103.2 102.99 103.28 7.6294E-06 0 0 0 0.00016382 2 65186 58.674 48.622 1 NaN NaN 0 4861700 4861700 0 24918 681 9396 9613 39080;39081 39080 528 MAPALSGANLTSPR 14 0 1 Oxidation (M) _M(ox)APALSGANLTSPR_ M(1)APALSGANLTSPR M(65.35)APALSGANLTSPR 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3958 2 701.361376 1400.7082 73773.01 0.81567 0.00057208 -0.21322 -0.00014954 0.60245 0.00042253 701.361536837251 706.365308525672 58.244 0.19606 58.244 58.116 58.312 0 49 13 6 0 0 0 0.00095873 1 33796 65.348 57.46 1 1.9345 2.1162 0 34240000 11841000 22399000 24919 619 9397 9614 39082 39082 473 MAPVITEETTLQLEDIIK 18 1 0 Oxidation (M) _M(ox)APVITEETTLQLEDIIK_ M(1)APVITEETTLQLEDIIK M(89.63)APVITEETTLQLEDIIK 0 1 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1031.0498 2 1030.54521 2059.07587 59008.83 0.64153 0.00066113 0.62633 0.00064546 1.2679 0.0013066 1031.04759762065 1035.0543123237 123.53 0.51704 123.53 123.3 123.82 0 272 37 10 0 0 0 4.8689E-08 2 79994 89.629 89.629 1 1.0985 1.2183 0 59005000 26702000 32303000 24920 924 9398 9615 39083;39084 39084 757 MAPVITEETTLQLEDIIK 18 1 0 Oxidation (M) _M(ox)APVITEETTLQLEDIIK_ M(1)APVITEETTLQLEDIIK M(148.96)APVITEETTLQLEDIIK 0 1 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1030.5497 2 1030.54521 2059.07587 59238.77 0.81556 0.00084047 0.639 0.00065852 1.4546 0.001499 1031.04750351853 1035.05441474622 123.11 0.57431 123.11 122.9 123.47 0 310 42 10 0 0 0 6.6506E-31 2 81620 148.96 148.96 1 1.2125 1.3675 0 62455000 28214000 34241000 24921 924 9398 9615 39085;39086 39086 757 MAPVITEETTLQLEDIIK 18 1 0 Oxidation (M) _M(ox)APVITEETTLQLEDIIK_ M(1)APVITEETTLQLEDIIK M(61.21)APVITEETTLQLEDIIK 0 1 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1034.5535 2 1030.54521 2059.07587 59701.78 0.49744 0.00051263 0.0017917 1.8464E-06 0.49923 0.00051448 1031.0458960285 1034.55245232356 134.57 0.15424 134.57 134.47 134.63 0 28 4 9 0 0 0 1.9191E-05 1 81349 61.212 52.805 1 1.2049 0.99529 0 31510000 13792000 17717000 24922 924 9398 9615 39087 39087 757 MAPVPLDDSNRPASLTK 17 1 1 Oxidation (M) _M(ox)APVPLDDSNRPASLTK_ M(1)APVPLDDSNRPASLTK M(43.37)APVPLDDSNRPASLTK 0 1 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.3222 3 609.980492 1826.91965 77760.45 0.76683 0.00046775 -0.13811 -8.4241E-05 0.62873 0.00038351 610.314473529677 616.321728668221 54.383 0.5695 54.383 54.144 54.713 0 172 49 6 0 0 0 0.00027063 1 30623 43.37 43.37 1 1.3439 1.5775 0 33068000 12359000 20709000 24923 2083 9399 9616 39088 39088 1920 MAPVPLDDSNRPASLTK 17 1 1 Oxidation (M) _M(ox)APVPLDDSNRPASLTK_ M(1)APVPLDDSNRPASLTK M(50.65)APVPLDDSNRPASLTK 0 1 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.9811 3 609.980492 1826.91965 77447.88 0.18839 0.00011491 -0.19065 -0.00011629 -0.0022627 -1.3802E-06 609.980703358833 615.987731637842 53.434 0.66496 53.434 53.127 53.792 3.8147E-06 294 63 7 0 0 0 4.7816E-05 1 30456 50.653 48.248 1 1.2326 1.422 0 29550000 13749000 15800000 24924 2083 9399 9616 39089 39089 1920 MAPVPLDDSNRPASLTK 17 1 1 Oxidation (M) _M(ox)APVPLDDSNRPASLTK_ M(1)APVPLDDSNRPASLTK M(51.29)APVPLDDSNRPASLTK 0 1 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 923.4774 2 914.4671 1826.91965 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.553 1 53.553 53.053 54.053 0 0 0 0 0.0073674 1 30618 51.286 37.128 1 24925 2083 9399 9616 39090 39090 1920 MAPYQGPDAVPGALDYK 17 1 0 Oxidation (M) _M(ox)APYQGPDAVPGALDYK_ M(1)APYQGPDAVPGALDYK M(92.86)APYQGPDAVPGALDYK 0 1 0 A0A0S2Z3G9;O43707;Q96BG6;F5GXS2;H7C144;A0A0S2Z3X3;A0A0S2Z3C0 A0A0S2Z3G9 A0A0S2Z3G9 ACTN4 Alpha-actinin-4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 908.9371 2 904.929819 1807.84509 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.617 1 81.617 81.117 82.117 0 0 0 0 4.5291E-06 1 49884 92.856 73.095 1 24926 548 9400 9617 39091 39091 401 MAQALEELR 9 0 1 Oxidation (M) _M(ox)AQALEELR_ M(1)AQALEELR M(69.6)AQALEELR 0 1 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.7781 2 538.773874 1075.53319 83573.8 0.72729 0.00039185 0.50182 0.00027037 1.2291 0.00066221 539.275827276239 543.777901799915 46.281 0.74281 46.281 45.931 46.673 0 250 65 5 0 0 0 0.0020856 1 25028 69.598 34.79 1 0.31132 0.3185 0 31807000 20908000 10899000 24927 1682 9401 9618 39092 39092 1498 MAQALEELR 9 0 1 Oxidation (M) _M(ox)AQALEELR_ M(1)AQALEELR M(87.48)AQALEELR 0 1 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.7793 2 538.773874 1075.53319 NaN NaN NaN -0.0068372 -3.6837E-06 NaN NaN NaN NaN 45.385 0.62211 45.385 45.062 45.685 -3.8147E-06 0 0 0 0.00037243 1 24844 87.476 58.327 1 NaN NaN 0 15950000 0 15950000 24928 1682 9401 9618 39093 39093 1498 MAQEVLTHLK 10 1 0 Oxidation (M) _M(ox)AQEVLTHLK_ M(1)AQEVLTHLK M(53.09)AQEVLTHLK 0 1 0 O14980;H7BZC5;C9IZS4;C9JQ02;C9JV99;C9J673;C9JKM9;C9JF49;C9IYM2;F8WF71 O14980 O14980 XPO1 Exportin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.3262 2 593.318448 1184.62234 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.566 1 37.566 37.066 38.066 3.8147E-06 0 0 0 0.0103 1 19145 53.089 24.88 1 24929 1371 9402 9619 39094 39094 1037 MAQEVLTHLK 10 1 0 Oxidation (M) _M(ox)AQEVLTHLK_ M(1)AQEVLTHLK M(80.75)AQEVLTHLK 0 1 0 O14980;H7BZC5;C9IZS4;C9JQ02;C9JV99;C9J673;C9JKM9;C9JF49;C9IYM2;F8WF71 O14980 O14980 XPO1 Exportin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.3256 2 593.318448 1184.62234 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.261 1 36.261 35.761 36.761 0 0 0 0 6.5715E-05 1 18615 80.755 43.734 1 24930 1371 9402 9619 39095 39095 1037 MASTFIGNSTAIQELFK 17 1 0 Oxidation (M) _M(ox)ASTFIGNSTAIQELFK_ M(1)ASTFIGNSTAIQELFK M(131.13)ASTFIGNSTAIQELFK 0 1 0 Q9BUF5;B4DP54;B3KS31;B4E386 Q9BUF5 Q9BUF5 TUBB6 Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 941.9817 2 937.471851 1872.92915 62740.89 0.89031 0.00083464 0.031201 2.925E-05 0.92151 0.00086389 937.973170229471 941.478500331803 119.35 0.37404 119.35 119.18 119.55 0 121 26 6 0 0 0 2.2532E-18 1 78699 131.13 22.536 1 1.6906 1.7595 0 11095000 4552700 6541900 24931 2004 9403 9620 39096 39096 1847 MASTFIGNSTAIQELFK 17 1 0 Unmodified _MASTFIGNSTAIQELFK_ 0 0 0 Q9BUF5;B4DP54;B3KS31;B4E386 Q9BUF5 Q9BUF5 TUBB6 Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 933.9834 2 929.474394 1856.93424 61787.35 0.73691 0.00068494 0.71478 0.00066437 1.4517 0.0013493 929.47598910504 933.983469540842 123.95 0.46928 123.95 123.77 124.24 0 140 31 7 0 0 0 2.3082E-18 1 82386 134.56 1.7717 1 1.0871 1.1054 0 16835000 7876200 8959000 24932 2004 9403 9621 39097 39097 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(68.07)ATEVAADALGEEWK 0 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.8807 2 818.879795 1635.74504 68391.78 0.51175 0.00041906 0.46768 0.00038298 0.97943 0.00080204 818.879460481293 823.388417663479 77.481 0.40086 77.481 77.233 77.634 0 65 32 4 0 0 0 0.00010794 2 45806 68.069 63.914 1 1.018 1.0343 0 6449100 2737000 3712000 24933 649;648 9404 9622 39098;39099 39099 503;504 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(186.58)ATEVAADALGEEWK 0 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.8864 2 818.879795 1635.74504 65495.02 0.82646 0.00067677 -0.013291 -1.0883E-05 0.81317 0.00066589 818.88003916109 822.886934218985 85.351 1.5471 85.351 84.929 86.476 0 893 127 12 0 0 0 2.3421E-48 4 51545 186.58 162.2 1 0.84365 1.0088 0 835800000 454020000 381780000 24934 649;648 9404 9622 39100;39101;39102;39103 39102 503;504 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(68.44)ATEVAADALGEEWK 0 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.8804 2 818.879795 1635.74504 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.566 1 77.566 77.066 78.066 0 0 0 0 0.00073067 1 45831 68.44 53.468 1 24935 649;648 9404 9622 39104 39104 503;504 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(97.21)ATEVAADALGEEWK 0 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.8868 2 818.879795 1635.74504 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.549 1 86.549 86.049 87.049 7.6294E-06 0 0 0 3.2723E-07 1 52133 97.214 72.871 1 24936 649;648 9404 9622 39105 39105 503;504 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(263.07)ATEVAADALGEEWK 0 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.8805 2 818.879795 1635.74504 64747.82 0.71413 0.00058479 -0.28158 -0.00023058 0.43255 0.00035421 818.879841528462 822.886758397497 84.47 1.6253 84.47 84.038 85.664 7.6294E-06 895 133 12 0 0 0 1.4382E-134 5 52125 263.07 263.07 1 0.78321 0.92297 0 598040000 323330000 274720000 24937 649;648 9404 9622 39106;39107;39108;39109;39110 39108 503;504 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(108.37)ATEVAADALGEEWK 0 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.3833 2 818.879795 1635.74504 66802.17 0.96286 0.00078847 0.20367 0.00016678 1.1665 0.00095524 819.38127336175 823.389579154002 85.604 0.42557 85.604 85.467 85.892 0 66 30 4 0 0 0 1.0239E-07 1 52706 108.37 98.419 1 0.84827 0.84674 0 14748000 8920500 5827100 24938 649;648 9404 9622 39111 39111 503;504 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(124.21)ATEVAADALGEEWK 0 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.3846 2 818.879795 1635.74504 65053.18 0.73587 0.00060259 -0.54728 -0.00044816 0.18859 0.00015443 818.879750860839 822.88658252106 97.96 2.1719 97.96 97.493 99.664 0 861 134 12 0 0 0 2.0589E-11 7 54981 124.21 124.21 1 1.2389 1.0683 0 99988000 45088000 54900000 24939 649;648 9404 9622 39112;39113;39114;39115;39116;39117;39118 39113 503;504 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(102.62)ATEVAADALGEEWK 0 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 822.8869 2 818.879795 1635.74504 65481.38 0.86205 0.00070591 -0.65563 -0.00053688 0.20642 0.00016903 818.879132446198 822.886190858762 108.16 1.1425 108.16 107.78 108.92 0 296 58 8 0 0 0 2.386E-07 1 62059 102.62 96.088 1 1.7202 1.3963 0 26934000 10050000 16884000 24940 649;648 9404 9622 39119 39119 503;504 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(46.07)ATEVAADALGEEWK 0 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 823.3887 2 818.879795 1635.74504 NaN NaN NaN 0.2407 0.00019711 NaN NaN NaN NaN 99.925 0.28054 99.925 99.824 100.1 0 0 0 0 0.0048844 1 56614 46.069 39.41 1 NaN NaN 0 1379000 0 1379000 24941 649;648 9404 9622 39120 39120 503;504 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(138.42)ATEVAADALGEEWK 0 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.8809 2 818.879795 1635.74504 65061.9 0.71563 0.00058602 -0.33795 -0.00027674 0.37769 0.00030928 818.879855441462 822.886687709002 97.914 2.2255 97.914 97.347 99.572 0 838 134 11 0 0 0 4.6662E-22 6 54606 138.42 121.4 1 1.2834 1.0946 0 95161000 42992000 52169000 24942 649;648 9404 9622 39121;39122;39123;39124;39125;39126 39124 503;504 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(77.6)ATEVAADALGEEWK 0 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 822.8865 2 818.879795 1635.74504 65524.62 0.75168 0.00061553 -0.66023 -0.00054065 0.091443 7.4881E-05 818.878929585208 822.886246009735 108.13 1.0943 108.13 107.71 108.81 -7.6294E-06 253 54 7 0 0 0 8.7543E-05 1 61113 77.597 71.064 1 1.7735 1.4299 0 23132000 7872800 15259000 24943 649;648 9404 9622 39127 39127 503;504 MATEVAADALGEEWK 15 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(44.62)ATEVAADALGEEWK 1 1 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.8853 2 839.885078 1677.7556 NaN NaN NaN -0.01468 -1.2329E-05 NaN NaN NaN NaN 80.124 0.40173 80.124 79.939 80.341 -7.6294E-06 0 0 0 0.0026915 1 48779 44.616 40.1 1 NaN NaN 0 4572400 4572400 0 24944 649;648 9404 9623 39128 39128 503;504 MATEVAADALGEEWK 15 1 0 Unmodified _MATEVAADALGEEWK_ 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 810.8825 2 810.882338 1619.75012 67422.09 0.76313 0.00061881 0.38957 0.00031589 1.1527 0.0009347 810.882936303391 814.889846923376 108.16 1.467 108.16 107.8 109.27 0 421 75 8 0 0 0 0.00043432 1 61927 57.567 51.596 1 1.8018 1.5575 0 110860000 40716000 70139000 24945 649;648 9404 9624 39129 39129 MATEVAADALGEEWK 15 1 0 Unmodified _MATEVAADALGEEWK_ 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6;A2A3R5 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 814.8901 2 810.882338 1619.75012 67522.7 0.65313 0.00052962 0.18038 0.00014626 0.83351 0.00067588 810.882775452525 814.889716264113 108.13 1.3881 108.13 107.71 109.1 0 359 68 8 0 0 0 1.4524E-15 2 61160 134.56 115.82 1 1.7462 1.4956 0 124420000 45646000 78773000 24946 649;648 9404 9624 39130;39131 39131 MAVLALLAK 9 1 0 Oxidation (M) _M(ox)AVLALLAK_ M(1)AVLALLAK M(73.62)AVLALLAK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.294 2 473.293714 944.572874 NaN NaN NaN 0.2212 0.00010469 NaN NaN NaN NaN 91.565 0.84 91.565 91.229 92.069 0 0 0 0 0.001805 1 55431 73.616 53.134 1 NaN NaN 0 5835700 5835700 0 24947 1665 9405 9625 39132 39132 1456 MAVLALLAK 9 1 0 Oxidation (M) _M(ox)AVLALLAK_ M(1)AVLALLAK M(57.28)AVLALLAK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2949 2 473.293714 944.572874 NaN NaN NaN 0.3054 0.00014454 NaN NaN NaN NaN 90.611 0.75378 90.611 90.134 90.888 0 0 0 0 0.0068655 2 55863 57.281 32.167 1 NaN NaN 0 8480400 8480400 0 24948 1665 9405 9625 39133;39134 39133 1456 MAVLALLAK 9 1 0 Unmodified _MAVLALLAK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.2962 2 465.296256 928.57796 NaN NaN NaN -0.27827 -0.00012948 NaN NaN NaN NaN 110.06 0.52922 110.06 109.8 110.33 0 0 0 0 0.0075569 1 68985 69.998 57.467 1 NaN NaN 0 4557900 4557900 0 24949 1665 9405 9626 39135 39135 MAVLALLAK 9 1 0 Unmodified _MAVLALLAK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2963 2 465.296256 928.57796 NaN NaN NaN -0.35511 -0.00016523 NaN NaN NaN NaN 109.27 0.48837 109.27 109.07 109.56 -7.6294E-06 0 0 0 0.015184 1 70060 62.659 49.699 1 NaN NaN 0 3424500 3424500 0 24950 1665 9405 9626 39136 39136 MAVLALLAK 9 1 0 Unmodified _MAVLALLAK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 465.2961 2 465.296256 928.57796 NaN NaN NaN -0.44273 -0.000206 NaN NaN NaN NaN 121.48 0.41803 121.48 121.31 121.73 -7.6294E-06 0 0 0 0.044637 1 72305 48.756 39.239 1 NaN NaN 0 2024900 2024900 0 24951 1665 9405 9626 39137 39137 MAVTFIGNSTAIQELFK 17 1 0 Oxidation (M) _M(ox)AVTFIGNSTAIQELFK_ M(1)AVTFIGNSTAIQELFK M(154.36)AVTFIGNSTAIQELFK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.9918 2 943.490044 1884.96554 61492.99 0.78697 0.0007425 -0.2291 -0.00021616 0.55787 0.00052634 943.991465965842 947.496901207352 124.82 0.82654 124.82 124.38 125.21 0 441 55 12 0 0 0 1.75E-34 2 80908 154.36 146.25 1 2.5091 2.8956 0 219180000 63123000 156060000 24952 1452 9406 9627 39138;39139 39139 1156 MAVTFIGNSTAIQELFK 17 1 0 Oxidation (M) _M(ox)AVTFIGNSTAIQELFK_ M(1)AVTFIGNSTAIQELFK M(186.91)AVTFIGNSTAIQELFK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.4971 2 943.490044 1884.96554 61264.27 0.94355 0.00089023 -0.25937 -0.00024472 0.68418 0.00064552 943.991475179156 947.496842601602 124.34 0.83724 124.34 124.04 124.88 7.6294E-06 428 53 11 0 0 0 3.1692E-58 3 82550 186.91 173.9 1 2.5158 2.9294 0 244950000 69287000 175670000 24953 1452 9406 9627 39140;39141;39142 39140 1156 MAVTFIGNSTAIQELFK 17 1 0 Oxidation (M) _M(ox)AVTFIGNSTAIQELFK_ M(1)AVTFIGNSTAIQELFK M(94.75)AVTFIGNSTAIQELFK 0 1 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 943.8096 2 943.490044 1884.96554 63312.95 0.82973 0.00078284 0.24082 0.00022721 1.0705 0.0010101 943.991765105894 947.496905800849 134.64 0.39261 134.64 134.56 134.95 0 17 8 5 0 0 0 2.7391E-11 1 81423 94.747 94.747 1 0.82311 0.67856 0 29761000 16041000 13720000 24954 1452 9406 9627 39143 39143 1156 MAVTFIGNSTAIQELFK 17 1 0 Unmodified _MAVTFIGNSTAIQELFK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 939.5049 2 935.492587 1868.97062 62400.93 0.97758 0.00091452 0.4808 0.00044978 1.4584 0.0013643 935.493491895396 940.001069590267 129.81 0.70551 129.81 129.38 130.09 0 190 41 7 0 0 0 3.327E-25 2 84471 143.42 134.72 1 1.1488 1.1988 0 12217000 5556400 6661100 24955 1452 9406 9628 39144;39145 39145 MAVTFIGNSTAIQELFK 17 1 0 Unmodified _MAVTFIGNSTAIQELFK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 940.0026 2 935.492587 1868.97062 61669.98 0.73274 0.00068547 0.83531 0.00078143 1.568 0.0014669 935.493593435464 940.001236487065 129.36 0.88463 129.36 128.82 129.7 0 197 62 8 0 0 0 4.2813E-57 1 86267 178.32 178.32 1 1.2317 1.2555 0 25994000 10059000 15935000 24956 1452 9406 9628 39146 39146 MAVTFIGNSTAIQELFKR 18 1 1 Oxidation (M) _M(ox)AVTFIGNSTAIQELFKR_ M(1)AVTFIGNSTAIQELFKR M(74.12)AVTFIGNSTAIQELFKR 0 1 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.3633 3 681.362825 2041.06665 74691.33 0.82233 0.0005603 -0.37035 -0.00025235 0.45197 0.00030796 681.363155859763 687.703733732375 126.54 0.56592 126.54 126.27 126.83 0 64 19 5 0 0 0 6.1415E-06 1 76178 74.12 74.12 1 0.88203 0.79377 0 1962900 1061000 901890 24957 1452 9407 9629 39147 39147 1156 MAVTFIGNSTAIQELFKR 18 1 1 Oxidation (M) _M(ox)AVTFIGNSTAIQELFKR_ M(1)AVTFIGNSTAIQELFKR M(45.62)AVTFIGNSTAIQELFKR 0 1 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.3631 3 681.362825 2041.06665 74930.64 0.66261 0.00045147 -0.2433 -0.00016578 0.41931 0.0002857 681.362957637452 687.7041874052 126.33 0.43732 126.33 126.14 126.58 0 80 18 6 0 0 0 0.0001362 1 75071 45.618 45.618 1 1.0117 0.87049 0 1829600 786950 1042600 24958 1452 9407 9629 39148 39148 1156 MAVTFIGNSTAIQELFKR 18 1 1 Unmodified _MAVTFIGNSTAIQELFKR_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCU2 Q5JP53 Q5JP53 TUBB Tubulin beta chain MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.7134 3 676.031187 2025.07173 75834.77 0.9549 0.00064554 1.1707 0.0007914 2.1256 0.0014369 676.366755786627 682.37340725847 132.17 0.48491 132.17 131.93 132.42 0 68 22 5 0 0 0 0.047311 1 80281 16.494 12.945 1 1.1112 0.98689 0 2206600 1234400 972240 24959 1452 9407 9630 39149 39149 MCLFAGFQR 9 0 1 Oxidation (M) _M(ox)CLFAGFQR_ M(1)CLFAGFQR M(67.03)CLFAGFQR 0 1 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.269 2 573.265161 1144.51577 78586.48 0.86865 0.00049797 -0.85323 -0.00048913 0.015423 8.8415E-06 573.265000363093 578.268761971907 79.676 0.75224 79.676 79.265 80.017 0 282 61 7 0 0 0 0.002576 1 48235 67.032 67.032 1 1.7738 2.0029 0 47165000 18133000 29031000 24960 999 9408 9631 39150 39150 791 MCLFAGFQR 9 0 1 Oxidation (M) _M(ox)CLFAGFQR_ M(1)CLFAGFQR M(47.85)CLFAGFQR 0 1 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.265 2 573.265161 1144.51577 NaN NaN NaN 0.57295 0.00032845 NaN NaN NaN NaN 92.025 0.71014 92.025 91.661 92.371 0 0 0 0 0.014778 1 51059 47.849 44.277 1 NaN NaN 0 1692900 1692900 0 24961 999 9408 9631 39151 39151 791 MCLFAGFQR 9 0 1 Oxidation (M) _M(ox)CLFAGFQR_ M(1)CLFAGFQR M(51.79)CLFAGFQR 0 1 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.2657 2 573.265161 1144.51577 NaN NaN NaN 0.40371 0.00023144 NaN NaN NaN NaN 91.847 0.73355 91.847 91.543 92.277 0 0 0 0 0.010972 1 50103 51.787 48.379 1 NaN NaN 0 2028400 2028400 0 24962 999 9408 9631 39152 39152 791 MDAILTEAIK 10 1 0 Unmodified _MDAILTEAIK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.8021 2 552.8021 1103.58965 86238.48 0.48652 0.00026895 0.58654 0.00032424 1.0731 0.00059319 552.802533672007 556.809398198327 87.199 0.49769 87.199 86.895 87.393 0 106 42 4 0 0 0 0.0035438 1 53778 64.04 53.167 1 0.61215 0.64588 0 19973000 11648000 8325600 24963 1817 9409 9632 39153 39153 MDAILTEAIK 10 1 0 Unmodified _MDAILTEAIK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.8093 2 552.8021 1103.58965 84190.25 0.22912 0.00012666 -0.36357 -0.00020098 -0.13445 -7.4325E-05 552.801413921999 556.809274368579 100.74 0.80827 100.74 100.31 101.12 7.6294E-06 195 58 6 0 0 0 0.011972 2 56974 51.268 38.231 1 1.2168 0.97416 0 7235100 3711200 3523800 24964 1817 9409 9632 39154;39155 39154 MDAILTEAIK 10 1 0 Unmodified _MDAILTEAIK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.8091 2 552.8021 1103.58965 81833.8 0.45974 0.00025415 -0.75295 -0.00041623 -0.29321 -0.00016209 552.801133376127 556.809122816137 100.62 0.81752 100.62 100.23 101.05 0 221 60 6 0 0 0 0.0091807 2 55952 55.064 44.65 1 1.2034 0.98619 0 8726100 3803400 4922700 24965 1817 9409 9632 39156;39157 39156 MDCQECPEGYR 11 0 1 Oxidation (M) _M(ox)DCQECPEGYR_ M(1)DCQECPEGYR M(73.84)DCQECPEGYR 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.7703 2 730.765594 1459.51663 71048.73 0.61934 0.00045259 -0.35379 -0.00025854 0.26554 0.00019405 730.765061421169 735.769952138563 21.206 0.22298 21.206 21.059 21.282 1.9073E-06 33 9 6 0 0 0 0.00029573 1 7549 73.841 73.841 1 1.7231 1.7993 0 4877400 1718300 3159100 24966 1504 9410 9633 39158 39158 1269 MDCQECPEGYR 11 0 1 Oxidation (M) _M(ox)DCQECPEGYR_ M(1)DCQECPEGYR M(73.07)DCQECPEGYR 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 P21333 P21333 FLNA;FLJ00119 Filamin-A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.7656 2 730.765594 1459.51663 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.267 1 21.267 20.767 21.767 0 0 0 0 0.00030054 1 7592 73.067 73.067 1 24967 1504 9410 9633 39159 39159 1269 MDCQECPEGYR 11 0 1 Oxidation (M) _M(ox)DCQECPEGYR_ M(1)DCQECPEGYR M(78.66)DCQECPEGYR 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.7712 2 730.765594 1459.51663 72648.45 0.50101 0.00036612 0.048693 3.5583E-05 0.5497 0.0004017 730.765634686564 735.769842076626 21.073 0.20076 21.073 20.98 21.18 0 24 10 4 0 0 0 0.00021121 2 7278 78.655 78.655 1 1.5664 1.5804 0 5998600 2135300 3863300 24968 1504 9410 9633 39160;39161 39160 1269 MDDPDYWR 8 0 1 Oxidation (M) _M(ox)DDPDYWR_ M(1)DDPDYWR M(51.35)DDPDYWR 0 1 0 Q14137;B2RDN4;A8K3R2;B4DEN9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.223 2 557.218931 1112.42331 82389.26 0.94689 0.00052763 -0.19839 -0.00011055 0.7485 0.00041708 557.218963184772 562.222807754206 44.318 0.60358 44.318 44.061 44.665 0 124 52 4 0 0 0 0.015185 1 23829 51.346 46.989 1 0.95225 0.99601 0 12967000 6614600 6352600 24969 1726 9411 9634 39162 39162 1562 MDDPDYWR 8 0 1 Oxidation (M) _M(ox)DDPDYWR_ M(1)DDPDYWR M(61.96)DDPDYWR 0 1 0 Q14137;B2RDN4;A8K3R2;B4DEN9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.2236 2 557.218931 1112.42331 81641.6 1.0193 0.000568 -0.66367 -0.00036981 0.35568 0.00019819 557.218815837619 562.222289021468 43.692 0.55316 43.692 43.33 43.883 0 128 42 4 0 0 0 0.0073259 2 23650 61.962 58.57 1 0.83497 0.83274 0 16637000 8083700 8553000 24970 1726 9411 9634 39163;39164 39163 1562 MDDPTVNWSNER 12 0 1 Oxidation (M) _M(ox)DDPTVNWSNER_ M(1)DDPTVNWSNER M(72.01)DDPTVNWSNER 0 1 0 H3BR35;Q7KZX8;B2RCT6;A8K2W7;P15170 H3BR35 H3BR35 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.3165 2 740.31208 1478.60961 NaN NaN NaN -0.38672 -0.00028629 NaN NaN NaN NaN 49.386 0.36786 49.386 49.245 49.613 0 0 0 0 0.0006131 1 27093 72.006 60.854 1 NaN NaN 0 5006200 0 5006200 24971 715 9412 9635 39165 39165 550 MDDPTVNWSNER 12 0 1 Oxidation (M) _M(ox)DDPTVNWSNER_ M(1)DDPTVNWSNER M(84.17)DDPTVNWSNER 0 1 0 H3BR35;Q7KZX8;B2RCT6;A8K2W7;P15170 H3BR35 H3BR35 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.3157 2 740.31208 1478.60961 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.231 1 48.231 47.731 48.731 0 0 0 0 0.00010138 1 26951 84.17 73.34 1 24972 715 9412 9635 39166 39166 550 MDDREDLVYQAK 12 1 1 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)DDREDLVYQAK_ M(1)DDREDLVYQAK M(83.86)DDREDLVYQAK 1 1 1 V9HW98;P62258;B4DJB0;B4DJF2;I3L3T1;I3L0W5 V9HW98 V9HW98 HEL2;YWHAE 14-3-3 protein epsilon ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.862 2 770.851038 1539.68752 NaN NaN NaN 0.10277 7.9221E-05 NaN NaN NaN NaN 51.365 0.55959 51.365 51.162 51.722 0 0 0 0 0.00016149 2 28376 83.862 70.092 1 NaN NaN 0 10360000 0 10360000 24973 1637 9413 9636 39167;39168 39168 1417 MDDREDLVYQAK 12 1 1 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)DDREDLVYQAK_ M(1)DDREDLVYQAK M(94.47)DDREDLVYQAK 1 1 1 V9HW98;P62258;B4DJB0;B4DJF2;I3L3T1;I3L0W5 V9HW98 V9HW98 HEL2;YWHAE 14-3-3 protein epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.8635 2 770.851038 1539.68752 70408.62 0.66459 0.0005123 -0.062393 -4.8096E-05 0.6022 0.00046421 771.352014189356 779.862595595206 50.362 0.35056 50.362 50.104 50.455 0 161 34 8 0 0 0 3.0643E-05 2 28386 94.465 86.82 1 2.1241 2.4516 0 30044000 11116000 18929000 24974 1637 9413 9636 39169;39170 39169 1417 MDFEDDYTHSACR 13 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)DFEDDYTHSACR_ M(1)DFEDDYTHSACR M(52)DFEDDYTHSACR 1 1 0 Q5BKZ1;A0A0A0MRN4;E2QRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.821 2 852.816869 1703.61919 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.643 1 56.643 56.143 57.143 3.8147E-06 0 0 0 0.0023102 1 31918 51.998 51.998 1 24975 1804 9414 9637 39171 39171 1671 MDFEDDYTHSACR 13 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)DFEDDYTHSACR_ M(1)DFEDDYTHSACR M(80.98)DFEDDYTHSACR 1 1 0 Q5BKZ1;A0A0A0MRN4;E2QRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.8206 2 852.816869 1703.61919 67888.96 0.58594 0.0004997 -0.47007 -0.00040088 0.11587 9.8818E-05 852.816414690823 858.32230416973 56.135 0.28587 56.135 55.987 56.273 0 41 23 4 0 0 0 8.7093E-05 1 32261 80.979 80.979 1 1.2493 1.2604 0 6042000 2740900 3301100 24976 1804 9414 9637 39172 39172 1671 MDGPGYGDEEEPLHTILGK 19 1 0 Oxidation (M) _M(ox)DGPGYGDEEEPLHTILGK_ M(1)DGPGYGDEEEPLHTILGK M(65.18)DGPGYGDEEEPLHTILGK 0 1 0 A0A087WT20;Q9NV06;B3KME9;A0A087X1F8;E5RHM4 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.6572 3 691.985972 2072.93609 72647.8 0.31008 0.00021457 0.17426 0.00012059 0.48435 0.00033516 691.985773938344 694.657600166216 89.454 0.57498 89.454 89.174 89.749 0 292 50 8 0 0 0 4.272E-06 2 53923 65.175 65.175 1 1.2764 1.393 0 50416000 20444000 29972000 24977 402 9415 9638 39173;39174 39173 291 MDGPGYGDEEEPLHTILGK 19 1 0 Oxidation (M) _M(ox)DGPGYGDEEEPLHTILGK_ M(1)DGPGYGDEEEPLHTILGK M(45.92)DGPGYGDEEEPLHTILGK 0 1 0 A0A087WT20;Q9NV06;B3KME9;A0A087X1F8;E5RHM4 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.9868 3 691.985972 2072.93609 73206.69 0.39441 0.00027293 0.35549 0.00024599 0.7499 0.00051892 692.320819512533 694.991720777364 101.87 0.60097 101.87 101.56 102.16 0 235 41 7 0 0 0 5.478E-05 1 57728 45.916 45.916 1 1.1374 0.9079 0 9306900 4609100 4697800 24978 402 9415 9638 39175 39175 291 MDLAAAAEPGAGSQHLEVR 19 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)DLAAAAEPGAGSQHLEVR_ M(1)DLAAAAEPGAGSQHLEVR M(84.75)DLAAAAEPGAGSQHLEVR 1 1 0 Q14566;B4E0N7;Q53T61 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 996.4815 2 990.975821 1979.93709 62027.37 0.40697 0.00040329 0.25259 0.00025031 0.65956 0.0006536 990.976666206572 995.980471010823 80.565 0.53964 80.565 80.194 80.734 0 119 46 5 0 0 0 1.2417E-06 3 48003 84.753 74.565 1 1.6676 1.6746 0 7893300 3373800 4519500 24979 1734 9416 9639 39176;39177;39178 39178 1567 MDLAAAAEPGAGSQHLEVRDEVAEK 25 1 1 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)DLAAAAEPGAGSQHLEVRDEVAEK_ M(1)DLAAAAEPGAGSQHLEVRDEVAEK M(66.87)DLAAAAEPGAGSQHLEVRDEVAEK 1 1 1 Q14566;B4E0N7;Q53T61 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 891.0988 3 884.757179 2651.24971 66023.09 0.16832 0.00014893 0.40977 0.00036255 0.57809 0.00051147 885.426286426859 891.099023903953 76.055 0.37654 76.055 75.88 76.257 0 113 35 5 0 0 0 1.947E-12 1 45885 66.871 66.871 1 1.8383 2.064 0 12904000 4681300 8223000 24980 1734 9417 9640 39179 39179 1567 MDLNSEQAEQLER 13 0 1 Oxidation (M) _M(ox)DLNSEQAEQLER_ M(1)DLNSEQAEQLER M(88.19)DLNSEQAEQLER 0 1 0 Q52LJ0 Q52LJ0 Q52LJ0 FAM98B Protein FAM98B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.86 2 789.856851 1577.69915 NaN NaN NaN -0.42718 -0.00033741 NaN NaN NaN NaN 43.567 0.42304 43.567 43.394 43.817 3.8147E-06 0 0 0 8.1198E-05 1 23421 88.187 77.955 1 NaN NaN 0 4747000 0 4747000 24981 1782 9418 9641 39180 39180 1650 MDLNSEQAEQLER 13 0 1 Oxidation (M) _M(ox)DLNSEQAEQLER_ M(1)DLNSEQAEQLER M(119.45)DLNSEQAEQLER 0 1 0 Q52LJ0 Q52LJ0 Q52LJ0 FAM98B Protein FAM98B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.8619 2 789.856851 1577.69915 70229.21 0.81493 0.00064367 -0.19528 -0.00015424 0.61965 0.00048943 789.856497164477 795.362502351911 42.897 0.41941 42.897 42.616 43.035 0 94 33 5 0 0 0 2.7791E-09 1 23135 119.45 112.32 1 1.9233 1.9211 0 16821000 5624300 11197000 24982 1782 9418 9641 39181 39181 1650 MDLNSEQAEQLER 13 0 1 Oxidation (M) _M(ox)DLNSEQAEQLER_ M(1)DLNSEQAEQLER M(64.12)DLNSEQAEQLER 0 1 0 Q52LJ0 Q52LJ0 Q52LJ0 FAM98B Protein FAM98B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.8613 2 789.856851 1577.69915 70478.01 1.2093 0.00095514 -0.22106 -0.00017461 0.98819 0.00078053 790.35815689476 794.860808542087 43.213 0.41839 43.213 42.981 43.399 0 116 35 5 0 0 0 0.00016051 1 23349 64.121 58.398 1 1.4198 1.407 0 15681000 5624700 10057000 24983 1782 9418 9641 39182 39182 1650 MDPAEEDTNVYTEK 14 1 0 Oxidation (M) _M(ox)DPAEEDTNVYTEK_ M(1)DPAEEDTNVYTEK M(79.49)DPAEEDTNVYTEK 0 1 0 B4DT61;E5RJB8;E5RHU3;E7ESK6;E9PBI9;B7Z5H2;B4DQ56;A0A024R9D1;P34741 B4DT61 B4DT61 SDC2 Syndecan;Syndecan-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.3553 2 829.348525 1656.6825 NaN NaN NaN -0.11931 -9.8953E-05 NaN NaN NaN NaN 37.223 0.29221 37.223 37.044 37.336 0 0 0 0 0.00013418 1 18918 79.492 75.96 1 NaN NaN 0 3614200 0 3614200 24984 274 9419 9642 39183 39183 210 MDPAEEDTNVYTEK 14 1 0 Oxidation (M) _M(ox)DPAEEDTNVYTEK_ M(1)DPAEEDTNVYTEK M(47.99)DPAEEDTNVYTEK 0 1 0 B4DT61;E5RJB8;E5RHU3;E7ESK6;E9PBI9;B7Z5H2;B4DQ56;A0A024R9D1;P34741 B4DT61 B4DT61 SDC2 Syndecan;Syndecan-2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.3486 2 829.348525 1656.6825 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.3 1 36.3 35.8 36.8 0 0 0 0 0.0065868 1 18645 47.991 42.146 1 24985 274 9419 9642 39184 39184 210 MDPDLSLTHK 10 1 0 Oxidation (M) _M(ox)DPDLSLTHK_ M(1)DPDLSLTHK M(67.08)DPDLSLTHK 0 1 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.7859 2 586.784438 1171.55432 77068.69 0.58242 0.00034176 0.36871 0.00021635 0.95113 0.00055811 586.78460816172 590.791854585257 34.841 0.4938 34.841 34.573 35.067 0 126 43 4 0 0 0 0.0013942 1 17495 67.081 56.371 1 1.324 1.3486 0 17948000 6730100 11218000 24986 1366 9420 9643 39185 39185 1032 MDPDLSLTHK 10 1 0 Oxidation (M) _M(ox)DPDLSLTHK_ M(1)DPDLSLTHK M(52.55)DPDLSLTHK 0 1 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.7858 2 586.784438 1171.55432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.025 1 34.025 33.525 34.525 3.8147E-06 0 0 0 0.011016 1 17161 52.549 30.589 1 24987 1366 9420 9643 39186 39186 1032 MDQADAQFHFVLNQSPNNIPALLGK 25 1 0 Oxidation (M) _M(ox)DQADAQFHFVLNQSPNNIPALLGK_ M(1)DQADAQFHFVLNQSPNNIPALLGK M(46.84)DQADAQFHFVLNQSPNNIPALLGK 0 1 0 A8K6X9;Q6PD62;H0YCE8 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.8041 3 928.797309 2783.3701 63118.74 0.62381 0.0005794 -0.18907 -0.00017561 0.43474 0.00040379 929.131230075461 931.802870660856 117.09 0.39685 117.09 116.87 117.26 7.6294E-06 125 23 7 0 0 0 1.2098E-06 1 76759 46.839 46.839 1 1.9302 1.9638 0 30433000 9054700 21379000 24988 765 9421 9644 39187 39187 593 MDQGNYTSVLEFSDDIVK 18 1 0 Oxidation (M) _M(ox)DQGNYTSVLEFSDDIVK_ M(1)DQGNYTSVLEFSDDIVK M(48.7)DQGNYTSVLEFSDDIVK 0 1 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1042.9834 2 1038.97515 2075.93575 62130.5 0.5756 0.00059804 -0.56064 -0.00058249 0.014966 1.5549E-05 1039.47480059631 1042.98290131295 115.16 0.29328 115.16 114.98 115.27 0 61 18 5 0 0 0 7.0905E-05 1 73182 48.704 47.396 1 1.092 1.1007 0 7134700 3683300 3451300 24989 1680 9422 9645 39188 39188 1491 MDQYFNQMEK 10 1 0 2 Oxidation (M) _M(ox)DQYFNQM(ox)EK_ M(1)DQYFNQM(1)EK M(95.64)DQYFNQM(95.64)EK 0 2 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;Q96I65;H7C044;B4DZE1;B4DH17;A0A0A0MSA7;A0A0U1RQK7;Q59GJ0;O43432 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.2831 2 683.27612 1364.53769 NaN NaN NaN 0.2029 0.00013864 NaN NaN NaN NaN 27.952 0.28294 27.952 27.796 28.079 0 0 0 0 2.1015E-05 1 13063 95.642 90.859 1 NaN NaN 0 7341800 0 7341800 24990 896 9423 9646 39189 39189 704;705 MDQYFNQMEK 10 1 0 2 Oxidation (M) _M(ox)DQYFNQM(ox)EK_ M(1)DQYFNQM(1)EK M(67.33)DQYFNQM(67.33)EK 0 2 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;Q96I65;H7C044;B4DZE1;B4DH17;A0A0A0MSA7;A0A0U1RQK7;Q59GJ0;O43432 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.2833 2 683.27612 1364.53769 NaN NaN NaN -0.25792 -0.00017623 NaN NaN NaN NaN 27.441 0.23814 27.441 27.32 27.558 0 0 0 0 0.00116 1 12750 67.334 55.287 1 NaN NaN 0 7190400 0 7190400 24991 896 9423 9646 39190 39190 704;705 MDSFDEDLAR 10 0 1 Oxidation (M) _M(ox)DSFDEDLAR_ M(1)DSFDEDLAR M(102.61)DSFDEDLAR 0 1 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.7576 2 607.753335 1213.49212 77993.02 0.33897 0.00020601 -0.074678 -4.5386E-05 0.26429 0.00016062 607.753035189391 612.757522901539 52.646 0.79821 52.646 52.248 53.046 0 213 58 6 0 0 0 6.5359E-06 3 29365 102.61 97.45 1 1.3902 1.4474 0 21140000 8311000 12829000 24992 2128 9424 9647 39191;39192;39193 39192 1955 MDSFDEDLAR 10 0 1 Oxidation (M) _M(ox)DSFDEDLAR_ M(1)DSFDEDLAR M(89.25)DSFDEDLAR 0 1 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.7578 2 607.753335 1213.49212 79395.2 0.33695 0.00020478 -0.505 -0.00030692 -0.16805 -0.00010214 607.752667358287 612.757424591199 51.552 0.66289 51.552 51.151 51.814 3.8147E-06 208 52 6 0 0 0 0.00016831 2 29204 89.247 86.24 1 1.555 1.7016 0 33585000 13803000 19782000 24993 2128 9424 9647 39194;39195 39195 1955 MDSFDEDLARPSGLLAQER 19 0 2 Oxidation (M) _M(ox)DSFDEDLARPSGLLAQER_ M(1)DSFDEDLARPSGLLAQER M(102.89)DSFDEDLARPSGLLAQER 0 1 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.3484 3 722.675909 2165.0059 69413.48 1.0879 0.00078617 -0.48665 -0.00035169 0.60121 0.00043448 722.675469912086 729.348042952127 90.56 0.80602 90.56 90.152 90.958 0 358 67 7 0 0 0 1.7027E-12 3 54685 102.89 102.89 1 1.211 1.3178 0 63604000 24565000 39039000 24994 2128 9425 9648 39196;39197;39198 39197 1955 MDSFDEDLARPSGLLAQER 19 0 2 Oxidation (M) _M(ox)DSFDEDLARPSGLLAQER_ M(1)DSFDEDLARPSGLLAQER M(89.85)DSFDEDLARPSGLLAQER 0 1 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.0095 3 722.675909 2165.0059 69493.68 0.71156 0.00051423 -0.70472 -0.00050929 0.0068402 4.9433E-06 723.009803538777 729.348036978049 89.708 0.7032 89.708 89.348 90.051 0 403 59 10 0 0 0 1.3035E-08 3 55289 89.846 89.846 1 1.1986 1.3916 0 83333000 36745000 46588000 24995 2128 9425 9648 39199;39200;39201 39199 1955 MDSFDEDLARPSGLLAQER 19 0 2 Oxidation (M) _M(ox)DSFDEDLARPSGLLAQER_ M(1)DSFDEDLARPSGLLAQER M(51.82)DSFDEDLARPSGLLAQER 0 1 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.6764 3 722.675909 2165.0059 71178 0.46938 0.00033921 -0.7226 -0.00052221 -0.25322 -0.000183 722.675784167393 729.348063438283 103.26 0.56258 103.26 103 103.57 0 239 39 9 0 0 0 9.5229E-06 1 57839 51.819 51.819 1 0.88653 0.80766 0 7421400 3619600 3801800 24996 2128 9425 9648 39202 39202 1955 MDSNFGLAGLPGSPK 15 1 0 Oxidation (M) _M(ox)DSNFGLAGLPGSPK_ M(1)DSNFGLAGLPGSPK M(50.46)DSNFGLAGLPGSPK 0 1 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.8735 2 753.866491 1505.71843 NaN NaN NaN -0.022617 -1.705E-05 NaN NaN NaN NaN 89.892 0.29147 89.892 89.76 90.052 0 0 0 0 0.0033302 1 54262 50.46 40.228 1 NaN NaN 0 8339700 0 8339700 24997 1385 9426 9649 39203 39203 1056 MDSNFGLAGLPGSPK 15 1 0 Oxidation (M) _M(ox)DSNFGLAGLPGSPK_ M(1)DSNFGLAGLPGSPK M(74.46)DSNFGLAGLPGSPK 0 1 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.8729 2 753.866491 1505.71843 NaN NaN NaN 0.34381 0.00025919 NaN NaN NaN NaN 88.984 0.39736 88.984 88.758 89.155 0 0 0 0 0.00011112 1 54866 74.46 64.228 1 NaN NaN 0 9468700 0 9468700 24998 1385 9426 9649 39204 39204 1056 MDSTEPPYSQK 11 1 0 Oxidation (M) _M(ox)DSTEPPYSQK_ M(1)DSTEPPYSQK M(169.41)DSTEPPYSQK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q504Z0;Q53G89;B4E2C5;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.7898 2 649.782093 1297.54963 NaN NaN NaN -0.18041 -0.00011723 NaN NaN NaN NaN 21.199 0.2969 21.199 21.033 21.33 0 0 0 0 1.9311E-40 1 7497 169.41 160.54 1 NaN NaN 0 10337000 0 10337000 24999 1658;1790 9427 9650 39205 39205 1437 MDSTNADALYVR 12 0 1 Oxidation (M) _M(ox)DSTNADALYVR_ M(1)DSTNADALYVR M(65.5)DSTNADALYVR 0 1 0 B4DKK3;B7Z9W6;Q59EH7;Q99615;K7EPP7;K7ESP1;A8K4T2;K7EIH8 B4DKK3 B4DKK3 DNAJC7 DnaJ homolog subfamily C member 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3148 2 686.314091 1370.61363 74765.23 0.82117 0.00056358 -0.4503 -0.00030904 0.37087 0.00025454 686.313976294233 691.31797074321 48.582 0.34489 48.582 48.443 48.788 0 72 25 5 0 0 0 0.00039161 1 27296 65.5 45.197 1 2.1766 2.1708 0 11631000 4492100 7139300 25000 990 9428 9651 39206 39206 784 MDTDLETMDLDQGGEALAPR 20 0 1 2 Oxidation (M) _M(ox)DTDLETM(ox)DLDQGGEALAPR_ M(1)DTDLETM(1)DLDQGGEALAPR M(102.73)DTDLETM(102.73)DLDQGGEALAPR 0 2 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1110.4872 2 1105.48302 2208.95148 57595.85 0.32254 0.00035656 -0.34677 -0.00038335 -0.024229 -2.6785E-05 1105.98478147585 1110.48679279383 82.438 0.58344 82.438 82.233 82.816 0 247 48 7 0 0 0 1.2471E-12 2 49121 102.73 100.16 1 1.6676 1.6894 0 28275000 9253900 19022000 25001 1411 9429 9652 39207;39208 39208 1094;1095 MDTDLETMDLDQGGEALAPR 20 0 1 2 Oxidation (M) _M(ox)DTDLETM(ox)DLDQGGEALAPR_ M(1)DTDLETM(1)DLDQGGEALAPR M(134.21)DTDLETM(134.21)DLDQGGEALAPR 0 2 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1105.9855 2 1105.48302 2208.95148 58410.54 0.32012 0.00035388 -0.10864 -0.0001201 0.21148 0.00023378 1106.48541077366 1110.98865308553 81.77 0.64185 81.77 81.39 82.032 0 248 54 6 0 0 0 1.3092E-23 4 49875 134.21 129.32 1 1.6851 1.7698 0 22984000 7881300 15103000 25002 1411 9429 9652 39209;39210;39211;39212 39212 1094;1095 MDTPLRR 7 0 2 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)DTPLRR_ M(1)DTPLRR M(52.64)DTPLRR 1 1 1 Q9H6F5;Q6ZW18 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.7507 2 473.742376 945.4702 87270 0.38711 0.00018339 0.38911 0.00018434 0.77623 0.00036773 473.742332397083 483.750562418358 25.166 0.60569 25.166 24.835 25.441 0 77 23 5 0 0 0 0.0082819 1 10764 52.636 37.004 1 0.89702 1.0586 0 157800000 81179000 76620000 25003 2037 9430 9653 39213 39213 1873 MDVAQSELDIYLSR 14 0 1 Oxidation (M) _M(ox)DVAQSELDIYLSR_ M(1)DVAQSELDIYLSR M(112.43)DVAQSELDIYLSR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.4046 2 828.400895 1654.78724 66131.55 0.56069 0.00046448 -0.15955 -0.00013217 0.40114 0.0003323 828.400745915489 833.404958963942 99.593 1.0021 99.593 98.956 99.958 0 530 84 8 0 0 0 4.3636E-08 3 60619 112.43 105.77 1 0.98842 1.1295 0 125160000 64881000 60278000 25004 2070 9431 9654 39214;39215;39216 39215 1904 MDVAQSELDIYLSR 14 0 1 Oxidation (M) _M(ox)DVAQSELDIYLSR_ M(1)DVAQSELDIYLSR M(115.14)DVAQSELDIYLSR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.4018 2 828.400895 1654.78724 65861.3 0.92012 0.00076223 -0.23678 -0.00019615 0.68334 0.00056608 828.40067666458 833.404823341545 98.751 1.0567 98.751 98.31 99.367 -7.6294E-06 590 89 9 0 0 0 1.3527E-09 3 61562 115.14 109.16 1 1.0661 1.2126 0 117980000 57269000 60716000 25005 2070 9431 9654 39217;39218;39219 39217 1904 MDVAQSELDIYLSR 14 0 1 Unmodified _MDVAQSELDIYLSR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 825.9097 2 820.403437 1638.79232 67577.23 0.97048 0.00079619 -0.085805 -7.0395E-05 0.88468 0.00072579 820.403819746434 825.407607853307 118.93 0.54997 118.93 118.68 119.23 0 187 27 10 0 0 0 0.0020752 1 70195 49.448 47.036 1 1.8279 1.5166 0 20718000 7220400 13498000 25006 2070 9431 9655 39220 39220 MDVAQSELDIYLSR 14 0 1 Unmodified _MDVAQSELDIYLSR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 825.4078 2 820.403437 1638.79232 67920.43 1.019 0.00083603 -0.48834 -0.00040064 0.53071 0.0004354 820.904774822021 825.407268032077 118.77 0.51231 118.77 118.52 119.03 0 175 24 10 0 0 0 1.6744E-05 3 69243 98.156 81.131 1 1.91 1.6661 0 26849000 8389200 18460000 25007 2070 9431 9655 39221;39222;39223 39221 MECPDALAVESK 12 1 0 Oxidation (M) _M(ox)ECPDALAVESK_ M(1)ECPDALAVESK M(44.64)ECPDALAVESK 0 1 0 A0A1B0GUH9;A0A1P0AZG4;A0PJI9 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.312 2 683.304878 1364.5952 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.637 1 44.637 44.137 45.137 0 0 0 0 0.014981 1 23999 44.639 33.488 1 25008 630 9432 9656 39224 39224 490 MEDLTNPEDIR 11 0 1 Oxidation (M) _M(ox)EDLTNPEDIR_ M(1)EDLTNPEDIR M(44.86)EDLTNPEDIR 0 1 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.8117 2 674.806099 1347.59764 73218.35 0.39664 0.00026766 0.089872 6.0646E-05 0.48651 0.0003283 674.806204644875 679.810409987384 54.837 0.58324 54.837 54.505 55.088 -3.8147E-06 253 56 6 0 0 0 0.0088706 1 30773 44.863 40.251 1 1.0088 1.068 0 41206000 16826000 24380000 25009 1742 9433 9657 39225 39225 1591 MEDLTNPEDIR 11 0 1 Oxidation (M) _M(ox)EDLTNPEDIR_ M(1)EDLTNPEDIR M(215.93)EDLTNPEDIR 0 1 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.8099 2 674.806099 1347.59764 73896.9 0.52826 0.00035647 -0.22293 -0.00015043 0.30533 0.00020604 674.806057949831 679.81001152262 53.971 0.74169 53.971 53.618 54.36 0 322 69 8 0 0 0 6.6723E-66 2 30786 215.93 215.93 1 1.1 1.2132 0 41419000 19234000 22184000 25010 1742 9433 9657 39226;39227 39227 1591 MEDLTNPEDIR 11 0 1 Oxidation (M) _M(ox)EDLTNPEDIR_ M(1)EDLTNPEDIR M(58.7)EDLTNPEDIR 0 1 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.8062 2 674.806099 1347.59764 73665.12 0.3552 0.00023969 -0.24336 -0.00016422 0.11185 7.5475E-05 674.806037553871 679.810211417265 64.681 0.59012 64.681 64.424 65.014 0 250 50 7 0 0 0 0.001967 1 32582 58.699 58.699 1 1.1599 0.96231 0 5380900 2453900 2927000 25011 1742 9433 9657 39228 39228 1591 MEDQFAALHENPDIIIATPGR 21 0 1 Oxidation (M) _M(ox)EDQFAALHENPDIIIATPGR_ M(1)EDQFAALHENPDIIIATPGR M(87.32)EDQFAALHENPDIIIATPGR 0 1 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.7214 3 785.386358 2353.13725 68936.41 0.74327 0.00058375 -0.20906 -0.00016419 0.53421 0.00041956 785.72068199086 789.056869768161 100.03 0.58656 100.03 99.727 100.31 0 295 46 8 0 0 0 8.6367E-11 2 62858 87.319 87.319 1 1.1731 1.2846 0 32331000 15530000 16801000 25012 1933 9434 9658 39229;39230 39229 1771 MEDSVGCLETAEEVK 15 1 0 Oxidation (M) _M(ox)EDSVGCLETAEEVK_ M(1)EDSVGCLETAEEVK M(80.69)EDSVGCLETAEEVK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 860.8792 2 856.87131 1711.72807 NaN NaN NaN -0.077027 -6.6002E-05 NaN NaN NaN NaN 63.476 0.50564 63.476 63.188 63.694 3.8147E-06 0 0 0 1.8835E-05 1 36366 80.69 74.307 1 NaN NaN 0 5407000 0 5407000 25013 81 9435 9659 39231 39231 61 MEDSVGCLETAEEVK 15 1 0 Oxidation (M) _M(ox)EDSVGCLETAEEVK_ M(1)EDSVGCLETAEEVK M(107.85)EDSVGCLETAEEVK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 856.8722 2 856.87131 1711.72807 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.387 1 63.387 62.887 63.887 3.8147E-06 0 0 0 1.008E-09 1 36395 107.85 91.176 1 25014 81 9435 9659 39232 39232 61 MEDSVGCLETAEEVK 15 1 0 Oxidation (M) _M(ox)EDSVGCLETAEEVK_ M(1)EDSVGCLETAEEVK M(103.88)EDSVGCLETAEEVK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.8798 2 856.87131 1711.72807 NaN NaN NaN -0.0023781 -2.0377E-06 NaN NaN NaN NaN 62.455 0.4905 62.455 62.194 62.684 0 0 0 0 4.6984E-08 1 36524 103.88 99.087 1 NaN NaN 0 8325400 0 8325400 25015 81 9435 9659 39233 39233 61 MEDSVGCLETAEEVK 15 1 0 Oxidation (M) _M(ox)EDSVGCLETAEEVK_ M(1)EDSVGCLETAEEVK M(70.49)EDSVGCLETAEEVK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.871 2 856.87131 1711.72807 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.302 1 62.302 61.802 62.802 3.8147E-06 0 0 0 0.00073093 1 36543 70.488 57.135 1 25016 81 9435 9659 39234 39234 61 MEDSVGCLETAEEVK 15 1 0 Oxidation (M) _M(ox)EDSVGCLETAEEVK_ M(1)EDSVGCLETAEEVK M(51.13)EDSVGCLETAEEVK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.8788 2 856.87131 1711.72807 66548.08 0.63682 0.00054567 -0.1387 -0.00011885 0.49812 0.00042683 856.870998874733 860.878710909608 73.637 0.4409 73.637 73.428 73.869 0 142 34 7 0 0 0 0.00035614 1 38945 51.135 51.135 1 1.5575 1.2788 0 2413800 1017200 1396600 25017 81 9435 9659 39235 39235 61 MEDSVGCLETAEEVK 15 1 0 Oxidation (M) _M(ox)EDSVGCLETAEEVK_ M(1)EDSVGCLETAEEVK M(42.1)EDSVGCLETAEEVK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 860.8781 2 856.87131 1711.72807 68108.91 0.50031 0.0004287 -0.32747 -0.0002806 0.17283 0.0001481 856.871414351371 860.878358296786 74.18 0.41595 74.18 73.994 74.41 0 136 30 6 0 0 0 0.0016621 1 38461 42.095 42.095 1 1.836 1.4321 0 2207000 939370 1267700 25018 81 9435 9659 39236 39236 61 MEEESGAPGVPSGNGAPGPK 20 1 0 Oxidation (M) _M(ox)EEESGAPGVPSGNGAPGPK_ M(1)EEESGAPGVPSGNGAPGPK M(101.45)EEESGAPGVPSGNGAPGPK 0 1 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.9359 2 942.425629 1882.83671 62820.2 0.91041 0.00085799 -0.020674 -1.9483E-05 0.88974 0.00083851 942.425942382251 946.432943565492 38.164 0.48899 38.164 37.923 38.412 0 209 41 7 0 0 0 5.7073E-13 3 19475 101.45 101.45 1 2.233 2.3553 0 30870000 9695700 21175000 25019 1599 9436 9660 39237;39238;39239 39238 1381 MEEESGAPGVPSGNGAPGPK 20 1 0 Oxidation (M) _M(ox)EEESGAPGVPSGNGAPGPK_ M(1)EEESGAPGVPSGNGAPGPK M(63.73)EEESGAPGVPSGNGAPGPK 0 1 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3;M0QYQ7;M0R0Y6 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 946.432 2 942.425629 1882.83671 62578.31 0.47064 0.00044355 -0.53933 -0.00050828 -0.068682 -6.4728E-05 942.926434109767 946.432607365794 37.307 0.57835 37.307 36.982 37.561 3.8147E-06 242 48 8 0 0 0 1.4002E-06 3 19193 63.727 63.727 1 2.0683 2.2531 0 39837000 14283000 25555000 25020 1599 9436 9660 39240;39241;39242 39240 1381 MEEIEGFR 8 0 1 Oxidation (M) _M(ox)EEIEGFR_ M(1)EEIEGFR M(74.13)EEIEGFR 0 1 0 Q9NY93;Q53HB9;H7C3E9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7311 2 513.731674 1025.4488 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.029 1 44.029 43.529 44.529 0 0 0 0 0.0055586 1 23600 74.127 28.409 1 25021 2081 9437 9661 39243 39243 1918 MEEIEGFR 8 0 1 Oxidation (M) _M(ox)EEIEGFR_ M(1)EEIEGFR M(89.14)EEIEGFR 0 1 0 Q9NY93;Q53HB9;H7C3E9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.7356 2 513.731674 1025.4488 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.131 1 44.131 43.631 44.631 0 0 0 0 0.002127 1 23663 89.142 40.639 1 25022 2081 9437 9661 39244 39244 1918 MEEIEGFR 8 0 1 Oxidation (M) _M(ox)EEIEGFR_ M(1)EEIEGFR M(112.17)EEIEGFR 0 1 0 Q9NY93;Q53HB9;H7C3E9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.736 2 513.731674 1025.4488 84692.49 0.64866 0.00033324 0.03413 1.7534E-05 0.68279 0.00035077 513.731482395975 518.735673556491 43.532 0.65218 43.532 43.176 43.828 0 192 52 5 0 0 0 0.00053116 3 23567 112.17 93.441 1 1.2908 1.4227 0 41270000 15584000 25687000 25023 2081 9437 9661 39245;39246;39247 39246 1918 MEEIEGFR 8 0 1 Oxidation (M) _M(ox)EEIEGFR_ M(1)EEIEGFR M(43.77)EEIEGFR 0 1 0 Q9NY93;Q53HB9;H7C3E9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.7354 2 513.731674 1025.4488 84904.1 0.20001 0.00010275 -0.0094099 -4.8342E-06 0.1906 9.7915E-05 513.731590966632 518.735772643145 51.149 0.63187 51.149 50.836 51.468 0 143 41 5 0 0 0 0.024195 1 25181 43.769 34.529 1 0.89196 0.77276 0 1997100 998570 998530 25024 2081 9437 9661 39248 39248 1918 MEEQTEILQNGFNPEEDK 18 1 0 Oxidation (M) _M(ox)EEQTEILQNGFNPEEDK_ M(1)EEQTEILQNGFNPEEDK M(159)EEQTEILQNGFNPEEDK 0 1 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1084.4786 2 1083.97842 2165.94229 57239.06 -0.15926 -0.00017264 -1.4861 -0.0016109 -1.6454 -0.0017836 1084.47792041014 1088.4871449037 81.485 0.63893 81.485 81.113 81.752 0 199 55 6 0 0 0 5.8181E-40 2 48593 159 153.72 1 1.1096 1.0867 0 22102000 11344000 10758000 25025 2042 9438 9662 39249;39250 39249 1879 MEEQTEILQNGFNPEEDK 18 1 0 Oxidation (M) _M(ox)EEQTEILQNGFNPEEDK_ M(1)EEQTEILQNGFNPEEDK M(145.43)EEQTEILQNGFNPEEDK 0 1 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1087.9858 2 1083.97842 2165.94229 56590.94 0.1314 0.00014243 -1.9672 -0.0021324 -1.8358 -0.0019899 1083.97839101465 1088.486495869 80.67 0.67276 80.67 80.26 80.933 0 267 54 8 0 0 0 2.1215E-30 3 49174 145.43 140.15 1 1.1495 1.1715 0 30895000 13155000 17740000 25026 2042 9438 9662 39251;39252;39253 39253 1879 MEETPTEYLQR 11 0 1 Unmodified _MEETPTEYLQR_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 699.3268 2 698.824292 1395.63403 76671.82 0.48644 0.00033994 0.2514 0.00017568 0.73784 0.00051562 698.824213193079 703.828591921172 74.038 0.36845 74.038 73.845 74.213 0 91 28 5 0 0 0 0.01831 1 38442 44.863 34.106 1 0.86385 0.75306 0 1270700 679180 591470 25027 1926 9439 9663 39254 39254 MEHLAQLR 8 0 1 Oxidation (M) _M(ox)EHLAQLR_ M(1)EHLAQLR M(86.83)EHLAQLR 0 1 0 Q9Y3A4;Q9NSQ0 Q9Y3A4 Q9Y3A4 RRP7A;RRP7BP Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2675 2 507.263476 1012.5124 85475.55 0.52214 0.00026486 -0.57857 -0.00029349 -0.056432 -2.8626E-05 507.263153980877 512.267283105663 24.247 0.67433 24.247 23.919 24.594 1.9073E-06 92 28 6 0 0 0 0.0031667 2 9940 86.833 51.477 1 1.1764 1.2487 0 42200000 18658000 23542000 25028 2133 9440 9664 39255;39256 39255 1965 MEHLAQLR 8 0 1 Oxidation (M) _M(ox)EHLAQLR_ M(1)EHLAQLR M(55.9)EHLAQLR 0 1 0 Q9Y3A4;Q9NSQ0 Q9Y3A4 Q9Y3A4 RRP7A;RRP7BP Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 338.5114 3 338.51141 1012.5124 103932.9 0.096737 3.2747E-05 -0.084897 -2.8739E-05 0.01184 4.0079E-06 338.511316618469 341.84742063599 24.26 0.38786 24.26 24.061 24.449 0 67 16 6 0 0 0 0.0061766 1 10017 55.902 19.568 1 1.1899 1.2237 0 19572000 8071200 11501000 25029 2133 9440 9664 39257 39257 1965 MEHLAQLR 8 0 1 Oxidation (M) _M(ox)EHLAQLR_ M(1)EHLAQLR M(81.78)EHLAQLR 0 1 0 Q9Y3A4;Q9NSQ0 Q9Y3A4 Q9Y3A4 RRP7A;RRP7BP Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 338.5115 3 338.51141 1012.5124 104396.4 -0.0073552 -2.4898E-06 -0.073347 -2.4829E-05 -0.080702 -2.7319E-05 338.511285779992 341.847436964536 23.699 0.43723 23.699 23.467 23.904 0 70 16 8 0 0 0 0.0019523 1 9509 81.784 34.181 1 1.4284 1.5433 0 26706000 10006000 16699000 25030 2133 9440 9664 39258 39258 1965 MEIYRPHK 8 1 1 Oxidation (M) _M(ox)EIYRPHK_ M(1)EIYRPHK M(71.34)EIYRPHK 0 1 1 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;Q92769;B3KUJ5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.2902 2 545.279126 1088.5437 81411.36 0.14021 7.6454E-05 -0.3074 -0.00016762 -0.16719 -9.1165E-05 545.278938704657 554.29020451302 16.372 0.4167 16.372 16.211 16.628 0 101 23 6 0 0 0 0.0091806 1 3518 71.342 55.961 1 1.3182 1.4477 0 4993100 2186600 2806500 25031 1715;1952 9441 9665 39259 39259 1546 MELAGSNTTASSPAR 15 0 1 Oxidation (M) _M(ox)ELAGSNTTASSPAR_ M(1)ELAGSNTTASSPAR M(89.3)ELAGSNTTASSPAR 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.8587 2 754.854112 1507.69367 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.911 1 23.911 23.411 24.411 1.9073E-06 0 0 0 5.8296E-05 1 9731 89.301 73.41 1 25032 1260 9442 9666 39260 39260 964 MELAGSNTTASSPAR 15 0 1 Oxidation (M) _M(ox)ELAGSNTTASSPAR_ M(1)ELAGSNTTASSPAR M(57.8)ELAGSNTTASSPAR 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.8545 2 754.854112 1507.69367 70674.53 0.30195 0.00022793 0.9957 0.00075161 1.2977 0.00097954 754.854432407233 760.36076518677 23.961 0.507 23.961 23.62 24.127 0 68 19 6 0 0 0 0.00020511 1 9624 57.802 56.302 1 1.4762 1.4638 0 12021000 4925200 7096200 25033 1260 9442 9666 39261 39261 964 MELAGSNTTASSPAR 15 0 1 Oxidation (M) _M(ox)ELAGSNTTASSPAR_ M(1)ELAGSNTTASSPAR M(119.39)ELAGSNTTASSPAR 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.8596 2 754.854112 1507.69367 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.713 1 23.713 23.213 24.213 0 0 0 0 1.599E-12 1 9547 119.39 101.57 1 25034 1260 9442 9666 39262 39262 964 MELAGSNTTASSPAR 15 0 1 Unmodified _MELAGSNTTASSPAR_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.8613 2 746.856654 1491.69876 71647.18 0.66975 0.0005002 0.033976 2.5375E-05 0.70372 0.00052558 746.8566741665 751.860630552094 42.489 0.35854 42.489 42.299 42.657 0 70 25 5 0 0 0 0.010028 1 19831 35.077 31.777 1 2.0691 1.831 0 1349500 480460 869010 25035 1260 9442 9667 39263 39263 MELAGSNTTASSPAR 15 0 1 Unmodified _MELAGSNTTASSPAR_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.8615 2 746.856654 1491.69876 71919.4 0.17698 0.00013218 0.0038256 2.8571E-06 0.1808 0.00013503 746.855997661282 751.860861515736 42.665 0.37997 42.665 42.523 42.903 0 71 22 5 0 0 0 0.0095317 1 19410 35.268 29.727 1 2.0357 1.748 0 1088600 428870 659730 25036 1260 9442 9667 39264 39264 MELFSQLFIQAVR 13 0 1 Oxidation (M) _M(ox)ELFSQLFIQAVR_ M(1)ELFSQLFIQAVR M(79.97)ELFSQLFIQAVR 0 1 0 Q5TDE9;Q5TDF0;Q9BSD7 Q5TDE9 Q5TDE9 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.4272 2 799.423976 1596.8334 NaN NaN NaN 0.37405 0.00029903 NaN NaN NaN NaN 124.85 0.35648 124.85 124.64 124.99 0 0 0 0 0.00022534 1 81059 79.974 66.621 1 NaN NaN 0 2366500 0 2366500 25037 1826 9443 9668 39265 39265 1681 MELFSQLFIQAVR 13 0 1 Oxidation (M) _M(ox)ELFSQLFIQAVR_ M(1)ELFSQLFIQAVR M(66.19)ELFSQLFIQAVR 0 1 0 Q5TDE9;Q5TDF0;Q9BSD7 Q5TDE9 Q5TDE9 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.9311 2 799.423976 1596.8334 NaN NaN NaN 0.648 0.00051803 NaN NaN NaN NaN 124.37 0.27282 124.37 124.25 124.52 0 0 0 0 0.00098572 1 82675 66.19 59.259 1 NaN NaN 0 2987600 0 2987600 25038 1826 9443 9668 39266 39266 1681 MEQANPLRPDGESK 14 1 1 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)EQANPLRPDGESK_ M(1)EQANPLRPDGESK M(65.4)EQANPLRPDGESK 1 1 1 Q9BU64;Q53SX2 Q9BU64 Q9BU64 CENPO;MGC11266 Centromere protein O MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.3807 2 815.380494 1628.74643 70045.81 0.73232 0.00059712 -0.42997 -0.00035059 0.30235 0.00024653 815.38001307319 824.391439519612 39.115 0.36609 39.115 38.92 39.286 0 68 28 4 0 0 0 5.6905E-05 1 20200 65.395 65.395 1 0.91616 1.0167 0 7840100 3279000 4561100 25039 2003 9444 9669 39267 39267 1845 MEQANPLRPDGESK 14 1 1 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)EQANPLRPDGESK_ M(1)EQANPLRPDGESK M(41.4)EQANPLRPDGESK 1 1 1 Q9BU64;Q53SX2 Q9BU64 Q9BU64 CENPO;MGC11266 Centromere protein O ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.8823 2 815.380494 1628.74643 NaN NaN NaN -0.19314 -0.00015748 NaN NaN NaN NaN 38.126 0.27074 38.126 38.057 38.328 0 0 0 0 0.0056281 1 20039 41.401 30.304 1 NaN NaN 0 7389200 7389200 0 25040 2003 9444 9669 39268 39268 1845 METASELGREEEDDVDLELR 20 0 2 Oxidation (M) _M(ox)ETASELGREEEDDVDLELR_ M(1)ETASELGREEEDDVDLELR M(43.16)ETASELGREEEDDVDLELR 0 1 1 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.3611 3 784.688431 2351.04346 71760.46 0.9764 0.00076617 -0.050509 -3.9634E-05 0.92589 0.00072653 785.022982248029 791.360390239703 79.621 0.38492 79.621 79.409 79.794 0 92 29 5 0 0 0 2.8093E-05 1 48430 43.164 43.164 1 1.4726 1.4821 0 9880800 2716600 7164200 25041 1838 9445 9670 39269 39269 1694 METEADAPSPAPSLGER 17 0 1 Oxidation (M) _M(ox)ETEADAPSPAPSLGER_ M(1)ETEADAPSPAPSLGER M(51.46)ETEADAPSPAPSLGER 0 1 0 Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.4056 2 887.401623 1772.78869 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.397 1 51.397 50.897 51.897 -3.8147E-06 0 0 0 0.0021478 1 28433 51.463 43.159 1 25042 1701 9446 9671 39270 39270 1534 METEADAPSPAPSLGER 17 0 1 Oxidation (M) _M(ox)ETEADAPSPAPSLGER_ M(1)ETEADAPSPAPSLGER M(64.65)ETEADAPSPAPSLGER 0 1 0 Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.4019 2 887.401623 1772.78869 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.447 1 51.447 50.947 51.947 0 0 0 0 0.00021372 1 28464 64.65 56.926 1 25043 1701 9446 9671 39271 39271 1534 METEADAPSPAPSLGER 17 0 1 Oxidation (M) _M(ox)ETEADAPSPAPSLGER_ M(1)ETEADAPSPAPSLGER M(49.42)ETEADAPSPAPSLGER 0 1 0 Q12873;B4DLC6;B4DKV1;Q2TAZ1;B3KWV4 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.4079 2 887.401623 1772.78869 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.241 1 50.241 49.741 50.741 0 0 0 0 0.0027979 1 28361 49.423 34.733 1 25044 1701 9446 9671 39272 39272 1534 MEVKPPPGRPQPDSGR 16 1 2 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)EVKPPPGRPQPDSGR_ M(1)EVKPPPGRPQPDSGR M(43.3)EVKPPPGRPQPDSGR 1 1 2 P51991;B4E036 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.3151 3 602.636949 1804.88902 78104.6 0.43877 0.00026442 -0.41094 -0.00024765 0.027831 1.6772E-05 603.304633895957 611.980704044304 25.549 0.62646 25.549 25.214 25.84 0 188 34 8 0 0 0 0.00045885 1 11059 43.297 40.855 1 1.6572 1.8173 0 21317000 7535000 13782000 25045 1598 9447 9672 39273 39273 1380 MEVQEQEEDISSLIR 15 0 1 Oxidation (M) _M(ox)EVQEQEEDISSLIR_ M(1)EVQEQEEDISSLIR M(134.49)EVQEQEEDISSLIR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 916.4377 2 911.43038 1820.84621 64922.04 0.82949 0.00075603 -0.34538 -0.00031479 0.48412 0.00044124 911.429578391886 916.434997524115 91.266 0.44749 91.266 91.054 91.501 0 107 36 5 0 0 0 7.1865E-16 1 55165 134.49 129.17 1 0.66945 0.70024 0 12956000 5142300 7814000 25046 1665 9448 9673 39274 39274 1457 MEVQEQEEDISSLIR 15 0 1 Oxidation (M) _M(ox)EVQEQEEDISSLIR_ M(1)EVQEQEEDISSLIR M(117.79)EVQEQEEDISSLIR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 911.4303 2 911.43038 1820.84621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.12 1 91.12 90.62 91.62 0 0 0 0 3.8722E-12 1 55124 117.79 97.015 1 25047 1665 9448 9673 39275 39275 1457 MEVQEQEEDISSLIR 15 0 1 Oxidation (M) _M(ox)EVQEQEEDISSLIR_ M(1)EVQEQEEDISSLIR M(106.49)EVQEQEEDISSLIR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 911.4332 2 911.43038 1820.84621 NaN NaN NaN -0.80269 -0.0007316 NaN NaN NaN NaN 90.482 0.40617 90.482 90.29 90.696 7.6294E-06 0 0 0 9.552E-11 2 56030 106.49 91.616 1 NaN NaN 0 6277400 6277400 0 25048 1665 9448 9673 39276;39277 39277 1457 MEVSPLQPVNENMQVNK 17 1 0 Acetyl (Protein N-term),2 Oxidation (M) _(ac)M(ox)EVSPLQPVNENM(ox)QVNK_ M(1)EVSPLQPVNENM(1)QVNK M(42.63)EVSPLQPVNENM(42.63)QVNK 1 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1019.9869 2 1015.97971 2029.94488 60056.58 0.2527 0.00025674 0.40392 0.00041037 0.65661 0.00066711 1016.48189171646 1019.98709500143 83.952 0.5401 83.952 83.688 84.228 0 111 42 5 0 0 0 0.00021495 1 50178 42.629 42.629 1 0.98344 1.0294 0 12035000 6289900 5744700 25049 1471 9449 9674 39278 39278 1205;1206 MFAPTK 6 1 0 Unmodified _MFAPTK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 347.6833 2 347.683268 693.351982 104266.4 -0.25545 -8.8815E-05 0.059291 2.0615E-05 -0.19616 -6.82E-05 347.683201858025 351.690269686126 27.446 0.30677 27.446 27.269 27.576 -1.9073E-06 56 15 5 0 0 0 0.035212 1 12710 116 96.304 1 0.5742 0.63574 0 45901000 29414000 16487000 25050 1548 9450 9675 39279 39279 MFASLFPHNPQFIGR 15 0 1 Oxidation (M) _M(ox)FASLFPHNPQFIGR_ M(1)FASLFPHNPQFIGR M(57.8)FASLFPHNPQFIGR 0 1 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.6346 3 593.299608 1776.877 79487.84 0.91057 0.00054024 0.04429 2.6277E-05 0.95486 0.00056652 593.633947424636 596.970077029654 98.509 0.79863 98.509 98.223 99.022 0 192 67 5 0 0 0 0.00010722 2 61568 57.804 57.804 1 1.7861 1.9233 0 25831000 9786800 16044000 25051 2048 9451 9676 39280;39281 39281 1880 MFASLFPHNPQFIGR 15 0 1 Unmodified _MFASLFPHNPQFIGR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 591.304 3 587.96797 1760.88208 NaN NaN NaN -0.33189 -0.00019514 NaN NaN NaN NaN 117.21 0.39634 117.21 117.05 117.44 0 0 0 0 0.029359 1 69069 29.324 24.34 1 NaN NaN 0 864280 0 864280 25052 2048 9451 9677 39282 39282 MFASLFPHNPQFIGR 15 0 1 Unmodified _MFASLFPHNPQFIGR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 591.3046 3 587.96797 1760.88208 81771.05 0.61207 0.00035988 -0.27583 -0.00016218 0.33624 0.0001977 587.967622127554 591.30398854046 116.94 0.40281 116.94 116.74 117.15 -7.6294E-06 67 17 6 0 0 0 0.008461 2 67878 28.351 24.747 1 1.1035 0.99033 0 1998800 915550 1083200 25053 2048 9451 9677 39283;39284 39283 MFEIVFEDPK 10 1 0 Oxidation (M) _M(ox)FEIVFEDPK_ M(1)FEIVFEDPK M(44.86)FEIVFEDPK 0 1 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.813 2 635.804839 1269.59513 NaN NaN NaN 0.24107 0.00015327 NaN NaN NaN NaN 98.219 0.97472 98.219 97.376 98.351 0 0 0 0 0.017847 1 61240 44.863 35.176 1 NaN NaN 0 7901400 0 7901400 25054 1454 9452 9678 39285 39285 1161 MFGGPGTASR 10 0 1 Oxidation (M) _M(ox)FGGPGTASR_ M(1)FGGPGTASR M(71.45)FGGPGTASR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8;A0A0S2Z4T0 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.7361 2 498.732009 995.449465 84986.02 0.4259 0.00021241 0.22526 0.00011234 0.65115 0.00032475 498.731987846632 503.736293178946 21.575 0.43795 21.575 21.422 21.86 -1.9073E-06 109 25 6 0 0 0 0.00093035 1 7899 71.451 65.28 1 1.2034 1.2459 0 37442000 15766000 21676000 25055 1457 9453 9679 39286 39286 1176 MFGGPGTASR 10 0 1 Oxidation (M) _M(ox)FGGPGTASR_ M(1)FGGPGTASR M(88.37)FGGPGTASR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8;A0A0S2Z4T0 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.2725 2 498.732009 995.449465 84986.04 -0.23033 -0.00011488 0.47966 0.00023922 0.24932 0.00012435 498.732077517885 503.736382293464 22.032 0.43211 22.032 21.801 22.233 0 92 24 6 0 0 0 0.038605 1 8166 88.37 71.406 1 1.2841 1.3795 0 46995000 19893000 27102000 25056 1457 9453 9679 39287 39287 1176 MFGGPGTASR 10 0 1 Oxidation (M) _M(ox)FGGPGTASR_ M(1)FGGPGTASR M(93.65)FGGPGTASR 0 1 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8;A0A0S2Z4T0 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.7318 2 498.732009 995.449465 82914.15 -0.075479 -3.7644E-05 0.013542 6.7537E-06 -0.061937 -3.089E-05 498.732052191236 503.736114181439 21.885 0.31627 21.885 21.744 22.061 0 47 13 6 0 0 0 0.00010311 1 7937 93.649 86.081 1 1.2801 1.2643 0 14984000 6823600 8160600 25057 1457 9453 9679 39288 39288 1176 MFILSDGEGK 10 1 0 Oxidation (M) _M(ox)FILSDGEGK_ M(1)FILSDGEGK M(54.42)FILSDGEGK 0 1 0 B5MC59;A4D105;P35244 B5MC59 B5MC59 RPA3 Replication protein A 14 kDa subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.7717 2 556.768257 1111.52196 NaN NaN NaN 0.49535 0.00027579 NaN NaN NaN NaN 57.69 0.44434 57.69 57.499 57.944 0 0 0 0 0.0064726 1 33475 54.416 27.814 1 NaN NaN 0 3715500 3715500 0 25058 661 9454 9680 39289 39289 515 MFLQYYLNEQGDR 13 0 1 Oxidation (M) _M(ox)FLQYYLNEQGDR_ M(1)FLQYYLNEQGDR M(103.22)FLQYYLNEQGDR 0 1 0 H0YM60;Q9NPE3 H0YM60 H0YM60 NOP10 H/ACA ribonucleoprotein complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.8873 2 846.887955 1691.76136 65172.5 1.226 0.0010383 -0.12183 -0.00010318 1.1041 0.00093508 846.88792816041 851.891858284595 91.083 0.6497 91.083 90.8 91.449 -7.6294E-06 227 51 6 0 0 0 3.6356E-06 2 54997 103.22 103.22 1 0.79013 0.81507 0 24202000 15157000 9045100 25059 1296 9455 9681 39290;39291 39290 987 MFLQYYLNEQGDR 13 0 1 Oxidation (M) _M(ox)FLQYYLNEQGDR_ M(1)FLQYYLNEQGDR M(81.87)FLQYYLNEQGDR 0 1 0 H0YM60;Q9NPE3 H0YM60 H0YM60 NOP10 H/ACA ribonucleoprotein complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.3898 2 846.887955 1691.76136 65785.73 0.89456 0.00075759 -0.16241 -0.00013755 0.73214 0.00062004 846.887847640222 852.393581582615 90.114 0.67355 90.114 89.845 90.519 7.6294E-06 289 60 6 0 0 0 6.7694E-05 1 55572 81.865 73.761 1 0.77906 0.82401 0 23612000 13079000 10533000 25060 1296 9455 9681 39292 39292 987 MFLQYYLNEQGDR 13 0 1 Oxidation (M) _M(ox)FLQYYLNEQGDR_ M(1)FLQYYLNEQGDR M(56.4)FLQYYLNEQGDR 0 1 0 H0YM60;Q9NPE3 H0YM60 H0YM60 NOP10 H/ACA ribonucleoprotein complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 847.3897 2 846.887955 1691.76136 64363.3 0.43208 0.00036592 0.11109 9.4082E-05 0.54317 0.00046 847.389642970852 851.892152416817 103.99 0.6931 103.99 103.66 104.36 0 175 45 5 0 0 0 0.00086615 2 58164 56.404 56.404 1 0.37421 0.32653 0 3530400 2426700 1103800 25061 1296 9455 9681 39293;39294 39293 987 MFLQYYLNEQGDR 13 0 1 Unmodified _MFLQYYLNEQGDR_ 0 0 0 H0YM60;Q9NPE3 H0YM60 H0YM60 NOP10 H/ACA ribonucleoprotein complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 844.391 2 838.890497 1675.76644 67738.38 0.70999 0.00059561 0.026202 2.198E-05 0.73619 0.00061759 838.890819971343 843.895151438469 114.98 0.36526 114.98 114.73 115.1 7.6294E-06 52 17 5 0 0 0 0.0036439 1 67240 49.35 48.908 1 0.7244 0.62904 0 2208200 1274400 933880 25062 1296 9455 9682 39295 39295 MFQLPVNNLGSLR 13 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)FQLPVNNLGSLR_ M(1)FQLPVNNLGSLR M(57.35)FQLPVNNLGSLR 1 1 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.4093 2 773.90595 1545.79735 70142.09 1.1852 0.0009172 -0.20917 -0.00016188 0.97599 0.00075532 773.905926304505 778.909969629705 127.35 0.54321 127.35 127.05 127.59 0 126 32 6 0 0 0 0.00099527 2 83012 57.347 50.803 1 0.88591 0.90186 0 7114800 3111700 4003200 25063 878 9456 9683 39296;39297 39297 686 MFQLPVNNLGSLR 13 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)FQLPVNNLGSLR_ M(1)FQLPVNNLGSLR M(55.35)FQLPVNNLGSLR 1 1 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.9059 2 773.90595 1545.79735 70344.45 0.93398 0.00072281 -0.24242 -0.00018761 0.69156 0.0005352 773.905809054857 778.909923087057 127.04 0.53166 127.04 126.8 127.34 -7.6294E-06 139 33 6 0 0 0 0.0013085 2 84832 55.353 48.074 1 0.78801 0.78364 0 7659900 4253600 3406300 25064 878 9456 9683 39298;39299 39299 686 MFVGQVPR 8 0 1 Oxidation (M) _M(ox)FVGQVPR_ M(1)FVGQVPR M(58.17)FVGQVPR 0 1 0 G5EA30;Q92879;E9PQK4;E9PSH0;E9PKU1;E9PKA1;F5H4Y5;F5H0D8 G5EA30 G5EA30 CELF1 CUGBP Elav-like family member 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.2534 2 475.249837 948.485122 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.646 1 41.646 41.146 42.146 0 0 0 0 0.018276 1 22398 58.167 39.437 1 25065 1278 9457 9684 39300 39300 978 MFVLDEADEMLSR 13 0 1 2 Oxidation (M) _M(ox)FVLDEADEM(ox)LSR_ M(1)FVLDEADEM(1)LSR M(105.46)FVLDEADEM(105.46)LSR 0 2 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3QR64;J3KSZ0;E7EQG2;Q14240;J3QLN6;J3KTN0;B4DKP9;Q9NZE6;B4DJX6 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.3602 2 794.355099 1586.69564 68322.38 0.97266 0.00077264 -0.28048 -0.0002228 0.69218 0.00054984 794.354946340385 799.359092045191 86.704 1.1677 86.704 86.153 87.321 0 347 89 7 0 0 0 6.8443E-06 3 52482 105.46 96.028 1 5.2558 5.8186 0 61846000 9296600 52550000 25066 770 9458 9685 39301;39302;39303 39303 600;601 MFVLDEADEMLSR 13 0 1 2 Oxidation (M) _M(ox)FVLDEADEM(ox)LSR_ M(1)FVLDEADEM(1)LSR M(83.86)FVLDEADEM(83.86)LSR 0 2 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3QR64;J3KSZ0;E7EQG2;Q14240;J3QLN6;J3KTN0;B4DKP9;Q9NZE6;B4DJX6 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.3561 2 794.355099 1586.69564 68746.79 1.0251 0.00081429 -0.47534 -0.00037759 0.54976 0.0004367 794.354433083409 799.359087876328 85.827 0.70978 85.827 85.358 86.067 0 258 52 7 0 0 0 0.00017639 2 52671 83.862 83.862 1 5.3058 6.1151 0 54510000 6356700 48154000 25067 770 9458 9685 39304;39305 39305 600;601 MFVLDEADEMLSR 13 0 1 2 Oxidation (M) _M(ox)FVLDEADEM(ox)LSR_ M(1)FVLDEADEM(1)LSR M(147.74)FVLDEADEM(147.74)LSR 0 2 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3QR64;J3KSZ0;E7EQG2;Q14240;J3QLN6;J3KTN0;B4DKP9;Q9NZE6;B4DJX6 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.3594 2 794.355099 1586.69564 NaN NaN NaN 0.21096 0.00016758 NaN NaN NaN NaN 86.181 0.56376 86.181 86.044 86.608 0 0 0 0 8.3869E-30 1 53128 147.74 131.11 1 NaN NaN 0 27335000 0 27335000 25068 770 9458 9685 39306 39306 600;601 MFVLDEADEMLSR 13 0 1 2 Oxidation (M) _M(ox)FVLDEADEM(ox)LSR_ M(1)FVLDEADEM(1)LSR M(41.28)FVLDEADEM(41.28)LSR 0 2 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3QR64;J3KSZ0;E7EQG2;Q14240;J3QLN6;J3KTN0;B4DKP9;Q9NZE6;B4DJX6 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.0552 2 794.355099 1586.69564 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.071 1 86.071 85.571 86.571 0 0 0 0 0.041234 1 53067 41.283 12.556 1 25069 770 9458 9685 39307 39307 600;601 MFVLDEADEMLSR 13 0 1 2 Oxidation (M) _M(ox)FVLDEADEM(ox)LSR_ M(1)FVLDEADEM(1)LSR M(63.41)FVLDEADEM(63.41)LSR 0 2 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3QR64;J3KSZ0;E7EQG2;Q14240;J3QLN6;J3KTN0;B4DKP9;Q9NZE6;B4DJX6 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.3546 2 794.355099 1586.69564 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.337 1 86.337 85.837 86.837 0 0 0 0 0.0028953 1 53215 63.408 26.715 1 25070 770 9458 9685 39308 39308 600;601 MFVLDEADEMLSR 13 0 1 Oxidation (M) _M(ox)FVLDEADEMLSR_ M(1)FVLDEADEMLSR M(41.4)FVLDEADEM(-41.4)LSR 0 1 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3QR64;J3KSZ0;E7EQG2;Q14240;J3QLN6;J3KTN0;B4DKP9;Q9NZE6;B4DJX6 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 786.3589 2 786.357641 1570.70073 72994.55 0.57927 0.00045551 0.86851 0.00068296 1.4478 0.0011385 786.859818746525 791.863917073197 120.2 0.27389 120.2 120.01 120.29 0 30 11 4 0 0 0 0.0051771 1 71296 41.399 35.016 2 0.67181 0.59401 0 1113700 705100 408580 25071 770 9458 9686 39309 39309 600;601 MGADQDTIPR 10 0 1 Oxidation (M) _M(ox)GADQDTIPR_ M(1)GADQDTIPR M(85.73)GADQDTIPR 0 1 0 Q9NSI6;Q5R2U6;H0Y463;H7BZR9;Q5R2U9;H0Y500;Q5R2U8;H0Y5I9 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.2592 2 560.258588 1118.50262 82992.3 0.40992 0.00022966 -0.17475 -9.7907E-05 0.23517 0.00013176 560.258675564717 565.26280413092 25.747 0.39166 25.747 25.513 25.905 0 64 21 5 0 0 0 0.00024629 1 11247 85.731 75.263 1 0.86823 0.89157 0 6454500 2999900 3454600 25072 2068 9459 9687 39310 39310 1895 MGADQDTIPR 10 0 1 Oxidation (M) _M(ox)GADQDTIPR_ M(1)GADQDTIPR M(75.38)GADQDTIPR 0 1 0 Q9NSI6;Q5R2U6;H0Y463;H7BZR9;Q5R2U9;H0Y500;Q5R2U8;H0Y5I9 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.2587 2 560.258588 1118.50262 81283.34 0.91099 0.00051039 0.43715 0.00024491 1.3481 0.0007553 560.258596121301 565.262633542857 25.429 0.3139 25.429 25.251 25.565 0 40 12 4 0 0 0 0.0005574 1 11066 75.378 62.341 1 0.95915 0.96137 0 11307000 5911100 5396400 25073 2068 9459 9687 39311 39311 1895 MGAGMGFGLER 11 0 1 2 Oxidation (M) _M(ox)GAGM(ox)GFGLER_ M(1)GAGM(1)GFGLER M(76.23)GAGM(76.23)GFGLER 0 2 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 M0QZM1;P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.262 2 579.257533 1156.50051 79007.95 0.77295 0.00044773 -0.16996 -9.8453E-05 0.60298 0.00034928 579.257566368819 584.261536501656 44.711 0.9779 44.711 44.149 45.127 0 293 87 5 0 0 0 0.00055755 2 23890 76.228 60.566 1 3.3633 3.559 0 41043000 10310000 30733000 25074 1599;1354 9460 9688 39312;39313 39312 1016;1017 MGAGMGFGLER 11 0 1 2 Oxidation (M) _M(ox)GAGM(ox)GFGLER_ M(1)GAGM(1)GFGLER M(90.11)GAGM(90.11)GFGLER 0 2 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 M0QZM1;P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.2623 2 579.257533 1156.50051 79315.65 1.2652 0.00073287 -0.88303 -0.0005115 0.38216 0.00022137 579.257000410082 584.261191906997 44 0.86382 44 43.494 44.358 0 274 73 5 0 0 0 0.00031317 2 23784 90.108 74.446 1 3.0663 3.5428 0 55985000 16254000 39732000 25075 1599;1354 9460 9688 39314;39315 39314 1016;1017 MGANNLER 8 0 1 Unmodified _MGANNLER_ 0 0 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 M0QZM1;P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.7226 2 452.718901 903.42325 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.184 1 22.184 21.684 22.684 0 0 0 0 0.012778 1 8326 73.26 43.075 1 25076 1599;1354 9461 9689 39316 39316 MGANSLER 8 0 1 Unmodified _MGANSLER_ 0 0 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 M0QZM1;P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 444.2174 2 439.213452 876.412351 90990.04 -0.25548 -0.00011221 0.81538 0.00035813 0.5599 0.00024591 439.213916091066 444.217678151685 25.971 0.33809 25.971 25.848 26.186 0 48 13 6 0 0 0 0.022432 1 9652 57.177 34.555 1 1.1915 1.0062 0 3003400 1356400 1646900 25077 1599;1354 9462 9690 39317 39317 MGESDDSILR 10 0 1 Oxidation (M) _M(ox)GESDDSILR_ M(1)GESDDSILR M(73.98)GESDDSILR 0 1 0 Q8WVC2;Q6FGH5;P63220 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.7557 2 569.755878 1137.4972 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.499 1 38.499 37.999 38.999 0 0 0 0 0.00018677 1 19788 73.985 62.474 1 25078 1655 9463 9691 39318 39318 1433 MGESDDSILR 10 0 1 Oxidation (M) _M(ox)GESDDSILR_ M(1)GESDDSILR M(102.07)GESDDSILR 0 1 0 Q8WVC2;Q6FGH5;P63220 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.7604 2 569.755878 1137.4972 NaN NaN NaN -0.95055 -0.00054158 NaN NaN NaN NaN 37.659 0.65279 37.659 37.392 38.045 0 0 0 0 1.2479E-05 1 19559 102.07 84.082 1 NaN NaN 0 52898000 0 52898000 25079 1655 9463 9691 39319 39319 1433 MGESDDSILR 10 0 1 Oxidation (M) _M(ox)GESDDSILR_ M(1)GESDDSILR M(100.84)GESDDSILR 0 1 0 Q8WVC2;Q6FGH5;P63220 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.7562 2 569.755878 1137.4972 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.622 1 37.622 37.122 38.122 0 0 0 0 3.3861E-06 1 19576 100.84 71.734 1 25080 1655 9463 9691 39320 39320 1433 MGFTEVTPVTGASLR 15 0 1 Oxidation (M) _M(ox)GFTEVTPVTGASLR_ M(1)GFTEVTPVTGASLR M(47.29)GFTEVTPVTGASLR 0 1 0 A0A024DAK3;Q59EC0;P55265;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.4057 2 791.400698 1580.78684 66325.91 0.69949 0.00055358 -0.23933 -0.00018941 0.46016 0.00036417 791.401430901244 796.4046549587 84.552 0.72581 84.552 84.198 84.923 0 179 55 5 0 0 0 0.00077683 1 51722 47.288 41.316 1 1.1013 1.1519 0 22621000 11515000 11105000 25081 5 9464 9692 39321 39321 5 MGGEEAEIR 9 0 1 Unmodified _MGGEEAEIR_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.233 2 496.229299 990.444045 84114.5 0.086573 4.296E-05 -1.0121 -0.00050222 -0.9255 -0.00045926 496.228574127928 501.232952587968 29.405 0.462 29.405 29.209 29.671 0 89 30 4 0 0 0 0.028974 1 11947 46.447 36.46 1 1.7333 1.5042 0 2149800 753720 1396100 25082 1691 9465 9693 39322 39322 MGGGSIEVSVPR 12 0 1 Oxidation (M) _M(ox)GGGSIEVSVPR_ M(1)GGGSIEVSVPR M(109.42)GGGSIEVSVPR 0 1 0 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.8074 2 602.803162 1203.59177 NaN NaN NaN 0.68501 0.00041293 NaN NaN NaN NaN 57.399 0.45918 57.399 57.222 57.681 0 0 0 0 9.6566E-09 2 32408 109.42 86.679 1 NaN NaN 0 5772700 0 5772700 25083 245 9466 9694 39323;39324 39323 182 MGGGSIEVSVPR 12 0 1 Oxidation (M) _M(ox)GGGSIEVSVPR_ M(1)GGGSIEVSVPR M(98.94)GGGSIEVSVPR 0 1 0 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.8082 2 602.803162 1203.59177 NaN NaN NaN 0.97039 0.00058496 NaN NaN NaN NaN 56.567 0.51732 56.567 56.284 56.802 0 0 0 0 9.4184E-06 1 32480 98.943 85.889 1 NaN NaN 0 8191900 0 8191900 25084 245 9466 9694 39325 39325 182 MGHAGAIIAGGK 12 1 0 Oxidation (M) _M(ox)GHAGAIIAGGK_ M(1)GHAGAIIAGGK M(103.87)GHAGAIIAGGK 0 1 0 Q6IAL5;B2R8A1;A8K4W7;P53597 Q6IAL5 Q6IAL5 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.7966 2 549.789858 1097.56516 81188.48 0.34372 0.00018897 0.20182 0.00011096 0.54554 0.00029993 549.789911741355 553.797124738756 20.593 0.31409 20.593 20.393 20.708 0 42 14 5 0 0 0 9.1949E-06 1 6988 103.87 94.689 1 2.312 2.3282 0 9994400 2140200 7854200 25085 743 9467 9695 39326 39326 580 MGHSAPLTNIR 11 0 1 Oxidation (M) _M(ox)GHSAPLTNIR_ M(1)GHSAPLTNIR M(99.57)GHSAPLTNIR 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.2133 3 404.87664 1211.60809 90176.16 0.31364 0.00012699 -0.32716 -0.00013246 -0.013517 -5.4728E-06 404.876488173585 408.212599914976 27.289 0.36628 27.289 27.1 27.467 1.9073E-06 87 17 8 0 0 0 1.109E-05 1 12518 99.568 90.246 1 1.3049 1.4458 0 64284000 28556000 35728000 25086 486 9468 9696 39327 39327 334 MGHSAPLTNIR 11 0 1 Oxidation (M) _M(ox)GHSAPLTNIR_ M(1)GHSAPLTNIR M(125.7)GHSAPLTNIR 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.8163 2 606.811322 1211.60809 76997.3 0.82435 0.00050022 -0.3476 -0.00021093 0.47674 0.00028929 606.811692071098 611.815010419336 27.28 0.30447 27.28 27.162 27.467 1.9073E-06 46 14 6 0 0 0 3.7789E-10 1 12521 125.7 116.52 1 1.4568 1.4904 0 26332000 11209000 15123000 25087 486 9468 9696 39328 39328 334 MGHSAPLTNIR 11 0 1 Oxidation (M) _M(ox)GHSAPLTNIR_ M(1)GHSAPLTNIR M(123.96)GHSAPLTNIR 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.2128 3 404.87664 1211.60809 93188.16 0.057232 2.3172E-05 -0.12681 -5.1344E-05 -0.069582 -2.8172E-05 404.876600890706 408.212641163583 26.588 0.47537 26.588 26.451 26.926 0 108 23 9 0 0 0 2.3539E-09 2 11980 123.96 107.7 1 1.3811 1.5746 0 98876000 38951000 59925000 25088 486 9468 9696 39329;39330 39329 334 MGHSAPLTNIR 11 0 1 Oxidation (M) _M(ox)GHSAPLTNIR_ M(1)GHSAPLTNIR M(123.86)GHSAPLTNIR 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.8161 2 606.811322 1211.60809 77023.71 0.49011 0.0002974 -0.32614 -0.0001979 0.16397 9.9499E-05 606.810918668891 611.815452985939 26.583 0.29387 26.583 26.451 26.745 0 65 14 8 0 0 0 4.7836E-09 1 11993 123.86 118.38 1 1.5912 1.8305 0 75333000 27770000 47562000 25089 486 9468 9696 39331 39331 334 MGITEYNNQCR 11 0 1 Oxidation (M) _M(ox)GITEYNNQCR_ M(1)GITEYNNQCR M(110.87)GITEYNNQCR 0 1 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3031 2 701.297918 1400.58128 NaN NaN NaN 0.32859 0.00023044 NaN NaN NaN NaN 25.057 0.3344 25.057 24.978 25.312 0 0 0 0 1.6806E-08 1 10856 110.87 99.707 1 NaN NaN 0 1799900 0 1799900 25090 1561 9469 9697 39332 39332 1313 MGITEYNNQCR 11 0 1 Oxidation (M) _M(ox)GITEYNNQCR_ M(1)GITEYNNQCR M(57.59)GITEYNNQCR 0 1 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q5TCD1 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.8035 2 701.297918 1400.58128 73802.29 0.5561 0.00038999 -0.41457 -0.00029074 0.14153 9.9252E-05 701.297490221975 706.30193177058 24.935 0.3102 24.935 24.773 25.084 -1.9073E-06 35 12 4 0 0 0 0.0022648 1 10581 57.59 54.91 1 1.7956 1.7837 0 7336100 1864100 5472000 25091 1561 9469 9697 39333 39333 1313 MGIYYIPVLGPAPR 14 0 1 Oxidation (M) _M(ox)GIYYIPVLGPAPR_ M(1)GIYYIPVLGPAPR M(99.01)GIYYIPVLGPAPR 0 1 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.9279 2 781.923612 1561.83267 66714.23 0.76333 0.00059687 0.17322 0.00013545 0.93655 0.00073231 781.924106135256 786.927638716467 116.06 0.71984 116.06 115.7 116.42 7.6294E-06 270 45 8 0 0 0 5.3902E-06 1 74014 99.013 99.013 1 1.0271 1.0858 0 40689000 18660000 22029000 25092 2000 9470 9698 39334 39334 1839 MGIYYIPVLGPAPR 14 0 1 Oxidation (M) _M(ox)GIYYIPVLGPAPR_ M(1)GIYYIPVLGPAPR M(102.61)GIYYIPVLGPAPR 0 1 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.9243 2 781.923612 1561.83267 68242.65 0.87392 0.00068334 -0.23944 -0.00018723 0.63448 0.00049611 781.923788373284 786.927776309109 115.43 0.69285 115.43 115.14 115.83 0 235 44 9 0 0 0 1.653E-06 1 75396 102.61 102.61 1 1.2766 1.4785 0 57425000 25238000 32186000 25093 2000 9470 9698 39335 39335 1839 MGIYYIPVLGPAPR 14 0 1 Oxidation (M) _M(ox)GIYYIPVLGPAPR_ M(1)GIYYIPVLGPAPR M(90.63)GIYYIPVLGPAPR 0 1 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 782.4259 2 781.923612 1561.83267 67754.7 0.76117 0.00059518 0.43146 0.00033737 1.1926 0.00093255 782.42581086779 786.927870185473 127.6 0.80347 127.6 127.26 128.06 -7.6294E-06 179 31 9 0 0 0 3.2031E-05 2 76839 90.629 90.629 1 1.0297 0.84911 0 11614000 6034300 5579700 25094 2000 9470 9698 39336;39337 39337 1839 MGIYYIPVLGPAPR 14 0 1 Oxidation (M) _M(ox)GIYYIPVLGPAPR_ M(1)GIYYIPVLGPAPR M(90.71)GIYYIPVLGPAPR 0 1 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 781.9244 2 781.923612 1561.83267 68127.58 0.71278 0.00055734 0.30599 0.00023926 1.0188 0.0007966 782.425646242229 786.927766023939 127.34 0.93628 127.34 127.03 127.96 0 188 38 9 0 0 0 3.1774E-05 2 75790 90.71 87.41 1 1.1522 0.94605 0 13789000 6793300 6995200 25095 2000 9470 9698 39338;39339 39339 1839 MGIYYIPVLGPAPR 14 0 1 Unmodified _MGIYYIPVLGPAPR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 773.9262 2 773.926154 1545.83776 NaN NaN NaN -0.87864 -0.00068 NaN NaN NaN NaN 133.81 0.46985 133.81 133.58 134.05 0 0 0 0 0.0053268 1 80619 55.549 49.016 1 NaN NaN 0 2294800 2294800 0 25096 2000 9470 9699 39340 39340 MGLAISLVATEK 12 1 0 Oxidation (M) _M(ox)GLAISLVATEK_ M(1)GLAISLVATEK M(54.2)GLAISLVATEK 0 1 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.8541 2 624.847039 1247.67952 77627.52 1.0508 0.00065662 0.00082829 5.1755E-07 1.0517 0.00065713 624.847394113081 628.853836974283 90.4 0.94803 90.4 89.914 90.862 -7.6294E-06 186 80 4 0 0 0 0.0020165 1 55958 54.198 42.604 1 1.5761 1.6284 0 24989000 8002500 16987000 25097 452 9471 9700 39341 39341 317 MGLAMGGGGGASFDR 15 0 1 2 Oxidation (M) _M(ox)GLAM(ox)GGGGGASFDR_ M(1)GLAM(1)GGGGGASFDR M(49.28)GLAM(49.28)GGGGGASFDR 0 2 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.8074 2 708.305743 1414.59693 72019.37 0.89589 0.00063457 -0.39127 -0.00027714 0.50462 0.00035742 708.80721754399 713.30974317627 37.172 0.73074 37.172 36.881 37.612 0 324 63 7 0 0 0 0.0010776 2 18793 49.28 44.668 1 3.1136 3.3084 0 42593000 9728700 32864000 25098 1599 9472 9701 39342;39343 39342 1382;1383 MGLAMGGGGGASFDR 15 0 1 2 Oxidation (M) _M(ox)GLAM(ox)GGGGGASFDR_ M(1)GLAM(1)GGGGGASFDR M(106.26)GLAM(106.26)GGGGGASFDR 0 2 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.3106 2 708.305743 1414.59693 71992.09 0.92542 0.00065548 -0.67375 -0.00047722 0.25167 0.00017826 708.305270898974 713.309694350548 36.412 0.58102 36.412 36.102 36.683 0 285 48 7 0 0 0 3.7582E-07 2 18594 106.26 96.825 1 2.9716 3.4021 0 85381000 23037000 62344000 25099 1599 9472 9701 39344;39345 39344 1382;1383 MGLIQTADQLR 11 0 1 Oxidation (M) _M(ox)GLIQTADQLR_ M(1)GLIQTADQLR M(90.11)GLIQTADQLR 0 1 0 A8K3M3;P18031;B4DSN5 A8K3M3 A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3358 2 631.332087 1260.64962 78933.98 0.62187 0.0003926 -0.20279 -0.00012803 0.41907 0.00026457 631.331745466513 636.336353339201 68.212 0.45035 68.212 67.968 68.418 0 78 34 4 0 0 0 0.00012705 1 40409 90.108 62.366 1 2.4581 2.4451 0 8263000 3057000 5206000 25100 724 9473 9702 39346 39346 560 MGLVDQLVEPLGPGLKPPEER 21 1 1 Oxidation (M) _M(ox)GLVDQLVEPLGPGLKPPEER_ M(1)GLVDQLVEPLGPGLKPPEER M(85.23)GLVDQLVEPLGPGLKPPEER 0 1 1 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.4179 3 764.075233 2289.20387 72718.72 1.1151 0.00085201 0.24025 0.00018357 1.3553 0.0010356 764.410603718936 770.417519593679 110.83 0.62309 110.83 110.42 111.05 0 187 42 7 0 0 0 1.3137E-09 2 69451 85.231 85.231 1 1.4898 1.7031 0 25728000 9492500 16235000 25101 1228 9474 9703 39347;39348 39347 943 MGLVDQLVEPLGPGLKPPEER 21 1 1 Oxidation (M) _M(ox)GLVDQLVEPLGPGLKPPEER_ M(1)GLVDQLVEPLGPGLKPPEER M(78.41)GLVDQLVEPLGPGLKPPEER 0 1 1 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.4119 3 764.075233 2289.20387 73152.27 0.88004 0.00067241 0.22552 0.00017231 1.1056 0.00084473 764.743419505515 770.417399054376 110.1 0.63356 110.1 109.76 110.4 0 177 40 7 0 0 0 5.3244E-09 2 70706 78.413 78.413 1 1.4075 1.6129 0 23188000 7721800 15466000 25102 1228 9474 9703 39349;39350 39350 943 MGLVDQLVEPLGPGLKPPEER 21 1 1 Oxidation (M) _M(ox)GLVDQLVEPLGPGLKPPEER_ M(1)GLVDQLVEPLGPGLKPPEER M(63.45)GLVDQLVEPLGPGLKPPEER 0 1 1 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.0759 3 764.075233 2289.20387 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.94 1 109.94 109.44 110.44 -7.6294E-06 0 0 0 1.0848E-05 1 70690 63.454 48.364 1 25103 1228 9474 9703 39351 39351 943 MGLVDQLVEPLGPGLKPPEER 21 1 1 Oxidation (M) _M(ox)GLVDQLVEPLGPGLKPPEER_ M(1)GLVDQLVEPLGPGLKPPEER M(69.76)GLVDQLVEPLGPGLKPPEER 0 1 1 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.0827 3 764.075233 2289.20387 70882.75 0.8572 0.00065496 -0.52561 -0.00040161 0.33158 0.00025335 764.409171794728 770.417759840685 121.22 0.59202 121.22 120.87 121.46 -7.6294E-06 107 26 7 0 0 0 2.0252E-08 1 72058 69.763 69.763 1 0.77874 0.65348 0 3333600 1947400 1386300 25104 1228 9474 9703 39352 39352 943 MGPAMGPALGAGIER 15 0 1 2 Oxidation (M) _M(ox)GPAM(ox)GPALGAGIER_ M(1)GPAM(1)GPALGAGIER M(108.56)GPAM(108.56)GPALGAGIER 0 2 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 M0QZM1;P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3601 2 730.355236 1458.69592 69418.72 0.85777 0.00062648 -0.79689 -0.00058201 0.060879 4.4463E-05 730.354762775974 735.358864691159 56.048 0.57832 56.048 55.835 56.413 0 251 47 8 0 0 0 2.412E-07 1 31464 108.56 108.56 1 2.5835 2.9232 0 104310000 23293000 81021000 25105 1599;1354 9475 9704 39353 39353 1018;1019 MGPGAASGGERPNLK 15 1 1 Oxidation (M) _M(ox)GPGAASGGERPNLK_ M(1)GPGAASGGERPNLK M(63.41)GPGAASGGERPNLK 0 1 1 E9PLD0;Q9H0U4;Q6FIG4 E9PLD0 E9PLD0 RAB1B Ras-related protein Rab-1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3741 2 729.361907 1456.70926 73267 0.37729 0.00027518 0.099172 7.2333E-05 0.47646 0.00034751 729.361873746193 738.373321378498 20.217 0.18606 20.217 20.108 20.295 0 17 5 4 0 0 0 0.00018642 1 6673 63.408 58.095 1 4.1673 4.6665 0 6790100 1940800 4849300 25106 1246 9476 9705 39354 39354 955 MGPGAASGGERPNLK 15 1 1 Oxidation (M) _M(ox)GPGAASGGERPNLK_ M(1)GPGAASGGERPNLK M(143.24)GPGAASGGERPNLK 0 1 1 E9PLD0;Q9H0U4;Q6FIG4 E9PLD0 E9PLD0 RAB1B Ras-related protein Rab-1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3732 2 729.361907 1456.70926 74843.84 0.59429 0.00043345 -0.35067 -0.00025577 0.24362 0.00017768 729.361981054624 738.372891743953 20.137 0.20665 20.137 20.018 20.224 0 31 6 6 0 0 0 4.9307E-22 1 6451 143.24 134.05 1 1.9171 2.1222 0 7793500 2251600 5541800 25107 1246 9476 9705 39355 39355 955 MGPLGLDHMASSIER 15 0 1 2 Oxidation (M) _M(ox)GPLGLDHM(ox)ASSIER_ M(1)GPLGLDHM(1)ASSIER M(75.32)GPLGLDHM(75.32)ASSIER 0 2 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 M0QZM1;P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.2608 3 549.260602 1644.75998 81491 0.56498 0.00031032 -0.28086 -0.00015426 0.28413 0.00015606 549.59489252399 552.596696375101 50.75 0.65291 50.75 50.406 51.059 -3.8147E-06 256 60 7 0 0 0 9.6237E-05 2 28005 75.316 70.75 1 3.1581 3.5624 0 99718000 25380000 74338000 25108 1599;1354 9477 9706 39356;39357 39357 1020;1021 MGPLGLDHMASSIER 15 0 1 2 Oxidation (M) _M(ox)GPLGLDHM(ox)ASSIER_ M(1)GPLGLDHM(1)ASSIER M(53.3)GPLGLDHM(53.3)ASSIER 0 2 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 M0QZM1;P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.597 3 549.260602 1644.75998 80769.91 0.38295 0.00021034 -0.12603 -6.9221E-05 0.25693 0.00014112 549.260632366967 552.596798909737 49.129 0.65718 49.129 48.898 49.555 0 314 55 9 0 0 0 0.00027908 2 27495 53.3 50.826 1 3.2292 3.7019 0 82527000 19510000 63018000 25109 1599;1354 9477 9706 39358;39359 39358 1020;1021 MGPLGLDHMASSIER 15 0 1 Unmodified _MGPLGLDHMASSIER_ 0 0 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 M0QZM1;P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.2673 3 538.597325 1612.77015 84741.12 0.56994 0.00030697 -0.50184 -0.00027029 0.0681 3.6678E-05 538.597068341036 542.267834856304 97.951 0.24842 97.951 97.851 98.099 7.6294E-06 42 13 5 0 0 0 0.048624 1 54416 16.744 12.642 1 1.6045 1.3954 0 965010 309960 655050 25110 1599;1354 9477 9707 39360 39360 MGQAPSQSLLPPAQDQPR 18 0 1 Oxidation (M) _M(ox)GQAPSQSLLPPAQDQPR_ M(1)GQAPSQSLLPPAQDQPR M(48.47)GQAPSQSLLPPAQDQPR 0 1 0 A0A140VK53;Q9UQ35;O60382;I3L3Q8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 973.9868 2 968.980906 1935.94726 NaN NaN NaN 1.1583 0.0011224 NaN NaN NaN NaN 65.217 0.32727 65.217 64.938 65.265 0 0 0 0 0.0012147 1 37436 48.467 35.906 1 NaN NaN 0 2831000 0 2831000 25111 619 9478 9708 39361 39361 474 MGQAPSQSLLPPAQDQPR 18 0 1 Oxidation (M) _M(ox)GQAPSQSLLPPAQDQPR_ M(1)GQAPSQSLLPPAQDQPR M(45.12)GQAPSQSLLPPAQDQPR 0 1 0 A0A140VK53;Q9UQ35;O60382;I3L3Q8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 973.9865 2 968.980906 1935.94726 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.065 1 64.065 63.565 64.565 0 0 0 0 0.0036364 1 37696 45.115 35.927 1 25112 619 9478 9708 39362 39362 474 MGSSLVIEISEEEVNK 16 1 0 Oxidation (M) _M(ox)GSSLVIEISEEEVNK_ M(1)GSSLVIEISEEEVNK M(152.47)GSSLVIEISEEEVNK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.4459 2 890.437674 1778.8608 64681.98 0.80276 0.00071481 0.28989 0.00025813 1.0927 0.00097294 890.939091746979 894.44472212141 96.678 0.6689 96.678 96.336 97.005 0 275 56 8 0 0 0 6.6071E-34 3 58768 152.47 152.47 1 0.95919 1.0823 0 110600000 53257000 57345000 25113 2070 9479 9709 39363;39364;39365 39365 1905 MGSSLVIEISEEEVNK 16 1 0 Oxidation (M) _M(ox)GSSLVIEISEEEVNK_ M(1)GSSLVIEISEEEVNK M(118.76)GSSLVIEISEEEVNK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 890.4376 2 890.437674 1778.8608 64685.36 0.75813 0.00067507 -0.1 -8.9048E-05 0.65813 0.00058602 890.437400510358 894.444648959768 95.923 0.80649 95.923 95.576 96.383 0 395 68 8 0 0 0 1.5864E-12 2 59641 118.76 118.76 1 0.99065 1.1212 0 134390000 70311000 64079000 25114 2070 9479 9709 39366;39367 39366 1905 MGSSLVIEISEEEVNK 16 1 0 Oxidation (M) _M(ox)GSSLVIEISEEEVNK_ M(1)GSSLVIEISEEEVNK M(96.23)GSSLVIEISEEEVNK 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 890.4382 2 890.437674 1778.8608 64292.56 0.42015 0.00037412 0.40618 0.00036168 0.82633 0.0007358 890.438230110368 894.445011466119 109.95 0.55656 109.95 109.79 110.34 7.6294E-06 143 29 6 0 0 0 5.9382E-07 2 62517 96.23 96.23 1 1.2712 1.0202 0 18294000 8084100 10210000 25115 2070 9479 9709 39368;39369 39368 1905 MGVFAQADGSAYIEQGNTK 19 1 0 Oxidation (M) _M(ox)GVFAQADGSAYIEQGNTK_ M(1)GVFAQADGSAYIEQGNTK M(77.53)GVFAQADGSAYIEQGNTK 0 1 0 Q9NPD3;E9PPI9 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1002.4628 2 1001.96238 2001.91021 NaN NaN NaN -0.007353 -7.3674E-06 NaN NaN NaN NaN 72.827 0.21511 72.827 72.677 72.892 0 0 0 0 3.6871E-07 2 42708 77.527 69.222 1 NaN NaN 0 5658700 5658700 0 25116 2056 9480 9710 39370;39371 39371 1885 MGVFAQADGSAYIEQGNTK 19 1 0 Oxidation (M) _M(ox)GVFAQADGSAYIEQGNTK_ M(1)GVFAQADGSAYIEQGNTK M(69.72)GVFAQADGSAYIEQGNTK 0 1 0 Q9NPD3;E9PPI9 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1005.9705 2 1001.96238 2001.91021 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.587 1 72.587 72.087 73.087 0 0 0 0 1.0863E-05 1 42516 69.716 63.992 1 25117 2056 9480 9710 39372 39372 1885 MGVPYCIIK 9 1 0 Oxidation (M) _M(ox)GVPYCIIK_ M(1)GVPYCIIK M(81.78)GVPYCIIK 0 1 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.7868 2 548.780113 1095.54567 76503.25 0.39062 0.00021437 -0.3143 -0.00017248 0.076323 4.1884E-05 548.779968519117 552.787033246469 74.469 0.86734 74.469 74.226 75.093 0 212 54 6 0 0 0 0.00083155 1 43704 81.784 70.015 1 1.1482 1.253 0 50396000 21360000 29036000 25118 1648 9481 9711 39373 39373 1428 MGVPYCIIK 9 1 0 Oxidation (M) _M(ox)GVPYCIIK_ M(1)GVPYCIIK M(47.85)GVPYCIIK 0 1 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.7803 2 548.780113 1095.54567 79226.77 0.59463 0.00032632 -0.48349 -0.00026533 0.11114 6.099E-05 548.77986172206 552.787110130157 72.822 0.73097 72.822 72.32 73.051 0 223 63 5 0 0 0 0.01234 2 43669 47.849 43.275 1 1.2369 1.3908 0 56307000 23811000 32496000 25119 1648 9481 9711 39374;39375 39375 1428 MGVPYCIIK 9 1 0 Oxidation (M) _M(ox)GVPYCIIK_ M(1)GVPYCIIK M(81.78)GVPYCIIK 0 1 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.7872 2 548.780113 1095.54567 79226.75 0.586 0.00032158 -0.63297 -0.00034736 -0.04697 -2.5776E-05 548.779930864983 552.787036130715 73.191 0.81306 73.191 72.95 73.763 7.6294E-06 258 68 7 0 0 0 0.00083155 1 43980 81.784 70.015 1 1.1307 1.2758 0 63849000 30447000 33402000 25120 1648 9481 9711 39376 39376 1428 MGVPYCIIK 9 1 0 Oxidation (M) _M(ox)GVPYCIIK_ M(1)GVPYCIIK M(44.39)GVPYCIIK 0 1 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.7872 2 548.780113 1095.54567 80935.6 0.44046 0.00024172 -0.44463 -0.000244 -0.0041687 -2.2877E-06 548.779934944742 552.78708421316 84.62 0.58479 84.62 84.263 84.848 0 183 44 6 0 0 0 0.016522 1 46198 44.395 38.292 1 0.50045 0.40059 0 7213500 4723400 2490100 25121 1648 9481 9711 39377 39377 1428 MGVPYCIIK 9 1 0 Unmodified _MGVPYCIIK_ 0 0 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.7831 2 540.782656 1079.55076 85193.63 0.42368 0.00022912 0.33361 0.00018041 0.75729 0.00040953 540.782708877044 544.790039826049 100.65 0.68862 100.65 100.42 101.11 0 158 48 4 0 0 0 0.005317 1 56906 67.032 59.464 1 0.8814 0.69405 0 4024900 2223300 1801600 25122 1648 9481 9712 39378 39378 MHALSLK 7 1 0 Oxidation (M) _M(ox)HALSLK_ M(1)HALSLK M(44.69)HALSLK 0 1 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 412.2328 2 408.225831 814.437109 NaN NaN NaN 0.6033 0.00024628 NaN NaN NaN NaN 22.878 0.42424 22.878 22.701 23.126 0 0 0 0 0.02733 1 8914 44.692 22.99 1 NaN NaN 0 8924900 0 8924900 25123 39 9482 9713 39379 39379 22 MHNQIPQVTSDGK 13 1 0 Oxidation (M) _M(ox)HNQIPQVTSDGK_ M(1)HNQIPQVTSDGK M(138.99)HNQIPQVTSDGK 0 1 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.8608 2 735.853915 1469.69328 72404.61 0.83052 0.00061114 0.5864 0.0004315 1.4169 0.0010426 735.854149830253 739.861321968527 26.014 0.42247 26.014 25.793 26.215 0 81 22 6 0 0 0 6.5176E-19 2 11463 138.99 138.99 1 2.0274 2.0048 0 19324000 6356500 12968000 25124 452 9483 9714 39380;39381 39380 318 MHNQIPQVTSDGK 13 1 0 Oxidation (M) _M(ox)HNQIPQVTSDGK_ M(1)HNQIPQVTSDGK M(166.14)HNQIPQVTSDGK 0 1 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8618 2 735.853915 1469.69328 69092.88 1.1999 0.00088294 0.078728 5.7932E-05 1.2786 0.00094087 735.854403524301 739.861289134997 25.486 0.30237 25.486 25.374 25.676 1.9073E-06 55 13 8 0 0 0 1.9445E-30 2 11160 166.14 121.79 1 1.7852 1.8308 0 25465000 9506000 15959000 25125 452 9483 9714 39382;39383 39383 318 MHPQSLAEEEIK 12 1 0 Oxidation (M) _M(ox)HPQSLAEEEIK_ M(1)HPQSLAEEEIK M(50.35)HPQSLAEEEIK 0 1 0 A0A087WVZ6;A6H8Y8;Q2HXV5;Q569J9 A0A087WVZ6 A0A087WVZ6 ZMYND8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3458 2 714.345391 1426.67623 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.066 1 33.066 32.566 33.566 0 0 0 0 0.010045 1 16447 50.353 26.323 1 25126 422 9484 9715 39384 39384 309 MHPQSLAEEEIK 12 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)HPQSLAEEEIK_ M(1)HPQSLAEEEIK M(40.73)HPQSLAEEEIK 1 1 0 A0A087WVZ6;A6H8Y8;Q2HXV5;Q569J9 A0A087WVZ6 A0A087WVZ6 ZMYND8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.3571 2 735.350674 1468.68679 NaN NaN NaN -3.9308 -0.0028905 NaN NaN NaN NaN 52.447 0.51229 52.447 52.143 52.655 0 0 0 0 0.0091969 1 29882 40.727 19.95 1 NaN NaN 0 9581600 0 9581600 25127 422 9484 9716 39385 39385 309 MHPQSLAEEEIK 12 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)HPQSLAEEEIK_ M(1)HPQSLAEEEIK M(74.24)HPQSLAEEEIK 1 1 0 A0A087WVZ6;A6H8Y8;Q2HXV5;Q569J9 A0A087WVZ6 A0A087WVZ6 ZMYND8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3511 2 735.350674 1468.68679 NaN NaN NaN 0.2357 0.00017332 NaN NaN NaN NaN 52.498 0.39769 52.498 52.317 52.715 3.8147E-06 0 0 0 0.00027529 2 29960 74.237 58.099 1 NaN NaN 0 4755300 4755300 0 25128 422 9484 9716 39386;39387 39387 309 MIAGANFYIVGR 12 0 1 Oxidation (M) _M(ox)IAGANFYIVGR_ M(1)IAGANFYIVGR M(112.41)IAGANFYIVGR 0 1 0 Q5TB52;B4DWB5;O95340;Q9UIR2 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.35 2 664.344997 1326.67544 NaN NaN NaN 0.030728 2.0414E-05 NaN NaN NaN NaN 89.116 0.24921 89.116 88.969 89.219 0 0 0 0 6.4074E-09 1 54941 112.41 90.325 1 NaN NaN 0 17763000 0 17763000 25129 1044 9485 9717 39388 39388 818 MIAGQVLDINLAAEPK 16 1 0 Oxidation (M) _M(ox)IAGQVLDINLAAEPK_ M(1)IAGQVLDINLAAEPK M(99.84)IAGQVLDINLAAEPK 0 1 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;B4DMJ1;B4DSU6;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.9651 2 849.95838 1697.90221 63968.48 0.76597 0.00065104 -0.28695 -0.0002439 0.47901 0.00040714 849.95856011632 853.965533049981 106.16 0.98734 106.16 105.82 106.81 7.6294E-06 563 71 13 0 0 0 4.3268E-08 5 65682 99.844 72.172 1 1.5081 1.781 0 374970000 153820000 221160000 25130 837;781 9486 9718 39389;39390;39391;39392;39393 39389 613 MIAGQVLDINLAAEPK 16 1 0 Oxidation (M) _M(ox)IAGQVLDINLAAEPK_ M(1)IAGQVLDINLAAEPK M(165.58)IAGQVLDINLAAEPK 0 1 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;B4DMJ1;B4DSU6;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.9589 2 849.95838 1697.90221 65178.54 0.72808 0.00061884 -0.27413 -0.000233 0.45395 0.00038584 849.95849277324 853.965563313178 105.55 1.0343 105.55 105.19 106.22 0 573 76 13 0 0 0 8.6625E-45 2 66935 165.58 126.58 1 1.4383 1.6933 0 444100000 189290000 254810000 25131 837;781 9486 9718 39394;39395 39395 613 MIAGQVLDINLAAEPK 16 1 0 Oxidation (M) _M(ox)IAGQVLDINLAAEPK_ M(1)IAGQVLDINLAAEPK M(67.25)IAGQVLDINLAAEPK 0 1 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;B4DMJ1;B4DSU6;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 850.4619 2 849.95838 1697.90221 65335.35 0.88632 0.00075334 0.084668 7.1964E-05 0.97099 0.0008253 849.958725070971 853.965693855022 117.73 0.95387 117.73 117.43 118.38 0 213 40 10 0 0 0 7.4167E-05 2 69258 67.252 48.521 1 0.46934 0.40163 0 71509000 49282000 22227000 25132 837;781 9486 9718 39396;39397 39396 613 MIAGQVLDINLAAEPK 16 1 0 Oxidation (M) _M(ox)IAGQVLDINLAAEPK_ M(1)IAGQVLDINLAAEPK M(46.38)IAGQVLDINLAAEPK 0 1 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;B4DMJ1;B4DSU6;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.9592 2 849.95838 1697.90221 NaN NaN NaN 0.085209 7.2424E-05 NaN NaN NaN NaN 123.37 0.41628 123.37 123.23 123.65 0 0 0 0 0.0036047 1 73766 46.378 40.274 1 NaN NaN 0 3930700 3930700 0 25133 837;781 9486 9718 39398 39398 613 MIAGQVLDINLAAEPK 16 1 0 Oxidation (M) _M(ox)IAGQVLDINLAAEPK_ M(1)IAGQVLDINLAAEPK M(64.55)IAGQVLDINLAAEPK 0 1 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;B4DMJ1;B4DSU6;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 853.9664 2 849.95838 1697.90221 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.43 1 123.43 122.93 123.93 -7.6294E-06 0 0 0 0.0004206 1 73789 64.55 41.175 1 25134 837;781 9486 9718 39399 39399 613 MIAGQVLDINLAAEPK 16 1 0 Oxidation (M) _M(ox)IAGQVLDINLAAEPK_ M(1)IAGQVLDINLAAEPK M(122.39)IAGQVLDINLAAEPK 0 1 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;B4DMJ1;B4DSU6;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 849.9604 2 849.95838 1697.90221 65260.02 0.59342 0.00050438 -0.034644 -2.9446E-05 0.55878 0.00047494 849.958755889128 853.965468282379 117.53 0.61782 117.53 117.21 117.82 0 210 29 10 0 0 0 7.0696E-13 2 68260 122.39 95.063 1 0.49394 0.42026 0 81429000 54026000 27403000 25135 837;781 9486 9718 39400;39401 39401 613 MIAGQVLDINLAAEPK 16 1 0 Oxidation (M) _M(ox)IAGQVLDINLAAEPK_ M(1)IAGQVLDINLAAEPK M(90.93)IAGQVLDINLAAEPK 0 1 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;B4DMJ1;B4DSU6;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 853.9661 2 849.95838 1697.90221 67438.02 0.88982 0.00075631 -0.28477 -0.00024205 0.60505 0.00051427 850.459312402573 853.965672940483 123.26 0.52959 123.26 123.07 123.6 -7.6294E-06 102 22 8 0 0 0 1.4017E-06 3 72733 90.926 68.041 1 0.66439 0.54167 0 6543900 3946200 2597800 25136 837;781 9486 9718 39402;39403;39404 39404 613 MIAGQVLDINLAAEPK 16 1 0 Unmodified _MIAGQVLDINLAAEPK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;B4DMJ1;B4DSU6;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.9614 2 841.960923 1681.90729 62506.41 1.003 0.00084446 0.36756 0.00030947 1.3705 0.0011539 842.463050111599 845.969448096696 112.22 0.46416 112.22 111.93 112.39 0 143 32 7 0 0 0 2.6748E-06 1 70804 91.62 91.62 1 0.84397 0.82867 0 23088000 12950000 10138000 25137 837;781 9486 9719 39405 39405 MIAGQVLDINLAAEPK 16 1 0 Unmodified _MIAGQVLDINLAAEPK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;B4DMJ1;B4DSU6;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.462 2 841.960923 1681.90729 64146.94 0.94455 0.00079527 0.31725 0.00026711 1.2618 0.0010624 841.961616654855 845.967506939009 111.63 0.49963 111.63 111.33 111.83 0 140 32 7 0 0 0 4.0981E-05 1 72050 84.365 84.365 1 0.82992 0.85678 0 25037000 14979000 10059000 25138 837;781 9486 9719 39406 39406 MIAGQVLDINLAAEPK 16 1 0 Unmodified _MIAGQVLDINLAAEPK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;B4DMJ1;B4DSU6;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 845.9708 2 841.960923 1681.90729 65783.13 0.85404 0.00071907 0.84278 0.00070959 1.6968 0.0014287 841.962187205848 845.968474183765 123.37 0.48497 123.37 123.21 123.69 7.6294E-06 122 19 9 0 0 0 3.0268E-12 2 73721 119.25 119.25 1 0.70122 0.56883 0 26062000 15009000 11053000 25139 837;781 9486 9719 39407;39408 39407 MIAGQVLDINLAAEPK 16 1 0 Unmodified _MIAGQVLDINLAAEPK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;B4DMJ1;B4DSU6;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 841.9641 2 841.960923 1681.90729 65687.81 0.83507 0.0007031 0.49906 0.00042019 1.3341 0.0011233 841.961714934125 845.968353585491 123.27 0.46667 123.27 123.05 123.51 0 128 20 8 0 0 0 0.0010435 1 72685 46.88 46.88 1 0.7804 0.63237 0 24317000 14105000 10211000 25140 837;781 9486 9719 39409 39409 MIAILTENYGGK 12 1 0 Oxidation (M) _M(ox)IAILTENYGGK_ M(1)IAILTENYGGK M(72.64)IAILTENYGGK 0 1 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3497 2 663.34212 1324.66969 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.761 1 75.761 75.261 76.261 0 0 0 0 0.00048167 1 45681 72.643 47.257 1 25141 892 9487 9720 39410 39410 701 MIASDSHRPEVK 12 1 1 Oxidation (M) _M(ox)IASDSHRPEVK_ M(1)IASDSHRPEVK M(74.46)IASDSHRPEVK 0 1 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.5737 3 462.566243 1384.6769 87344.69 0.49758 0.00023017 -0.15912 -7.3603E-05 0.33847 0.00015656 462.566171147451 468.573710027438 16.505 0.54203 16.505 16.342 16.884 0 136 22 9 0 0 0 5.1043E-05 2 3787 74.46 74.46 1 1.1573 1.3788 0 48638000 22879000 25759000 25142 2083 9488 9721 39411;39412 39411 1921 MIASDSHRPEVK 12 1 1 Oxidation (M) _M(ox)IASDSHRPEVK_ M(1)IASDSHRPEVK M(104.79)IASDSHRPEVK 0 1 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3463 2 693.345726 1384.6769 72956.83 0.87177 0.00060444 0.4607 0.00031943 1.3325 0.00092387 693.345967715734 702.357229030236 16.503 0.35311 16.503 16.361 16.714 0 66 15 6 0 0 0 1.4417E-05 1 3805 104.79 90.588 1 1.1585 1.2723 0 17498000 7113900 10384000 25143 2083 9488 9721 39413 39413 1921 MIASDSHRPEVK 12 1 1 Oxidation (M) _M(ox)IASDSHRPEVK_ M(1)IASDSHRPEVK M(68.44)IASDSHRPEVK 0 1 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.5737 3 462.566243 1384.6769 86627.35 -0.23554 -0.00010895 0.14191 6.5642E-05 -0.093629 -4.331E-05 462.566310266866 468.573756663927 16.194 0.77772 16.194 15.784 16.562 0 280 54 9 0 0 0 0.00015295 1 3350 68.44 59.486 1 1.111 1.2875 0 34865000 17171000 17694000 25144 2083 9488 9721 39414 39414 1921 MIASDSHRPEVK 12 1 1 Oxidation (M) _M(ox)IASDSHRPEVK_ M(1)IASDSHRPEVK M(76.14)IASDSHRPEVK 0 1 1 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.3459 2 693.345726 1384.6769 71977.3 0.17113 0.00011866 0.084273 5.843E-05 0.25541 0.00017709 693.345643009774 702.357140926508 16.191 0.5414 16.191 15.907 16.448 0 153 36 6 0 0 0 0.00015872 1 3422 76.143 73.03 1 1.2064 1.3566 0 13310000 5095200 8215000 25145 2083 9488 9721 39415 39415 1921 MIDMPVER 8 0 1 2 Oxidation (M) _M(ox)IDM(ox)PVER_ M(1)IDM(1)PVER M(55.53)IDM(55.53)PVER 0 2 0 H3BV80;H3BMS0;H3BMM9;H3BTC0;D3DU92;Q15287;H3BPG5;A0A024R9P1 H3BV80 H3BV80 RNPS1;hCG_2026745 RNA-binding protein with serine-rich domain 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.7401 2 511.735902 1021.45725 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.787 1 23.787 23.287 24.287 0 0 0 0 0.037967 1 9611 55.531 43.762 1 25146 1192 9489 9722 39416 39416 906;907 MIELLADNINLGDPSSMLK 19 1 0 2 Oxidation (M) _M(ox)IELLADNINLGDPSSM(ox)LK_ M(1)IELLADNINLGDPSSM(1)LK M(102.73)IELLADNINLGDPSSM(102.73)LK 0 2 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1057.537 2 1053.5265 2105.03844 59617 0.51127 0.00053864 -0.52554 -0.00055367 -0.014266 -1.503E-05 1053.5266469594 1058.03438983077 116.2 0.4401 116.2 115.98 116.42 0 150 27 9 0 0 0 8.246E-12 2 74040 102.73 89.96 1 3.0907 3.0293 0 20980000 4743500 16236000 25147 897 9490 9723 39417;39418 39417 711;712 MIELLADNINLGDPSSMLK 19 1 0 2 Oxidation (M) _M(ox)IELLADNINLGDPSSM(ox)LK_ M(1)IELLADNINLGDPSSM(1)LK M(80.47)IELLADNINLGDPSSM(80.47)LK 0 2 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1058.0339 2 1053.5265 2105.03844 59796.47 0.86507 0.00091137 -0.66815 -0.00070391 0.19692 0.00020746 1054.02753758569 1058.0344798429 115.72 0.411 115.72 115.53 115.94 0 129 26 7 0 0 0 5.9085E-06 1 75468 80.469 74.966 1 2.9954 3.0527 0 26009000 4927200 21081000 25148 897 9490 9723 39419 39419 711;712 MIEVQDELLR 10 0 1 Oxidation (M) _M(ox)IEVQDELLR_ M(1)IEVQDELLR M(40.35)IEVQDELLR 0 1 0 Q71F23;A8K8D2 Q71F23 Q71F23 CENPU Centromere protein U MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.3311 2 631.32647 1260.63839 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.707 1 82.707 82.207 83.207 0 0 0 0 0.039353 1 49435 40.352 14.793 1 25149 1866 9491 9724 39420 39420 1721 MIEYDPER 8 0 1 Oxidation (M) _M(ox)IEYDPER_ M(1)IEYDPER M(42.11)IEYDPER 0 1 0 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.7377 2 534.736957 1067.45936 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.378 1 34.378 33.878 34.878 0 0 0 0 0.046504 1 17199 42.109 23.333 1 25150 1398 9492 9725 39421 39421 1075 MIEYDPERR 9 0 2 Oxidation (M) _M(ox)IEYDPERR_ M(1)IEYDPERR M(78.5)IEYDPERR 0 1 1 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.7875 2 612.787512 1223.56047 77172.83 0.62612 0.00038368 -0.061827 -3.7887E-05 0.5643 0.00034579 612.787624670466 622.795860188382 25.311 0.29768 25.311 25.113 25.411 1.9073E-06 35 13 4 0 0 0 0.004543 2 10937 78.496 65.443 1 1.0501 1.1366 0 22724000 9570800 13153000 25151 1398 9493 9726 39422;39423 39422 1075 MIEYDPERR 9 0 2 Oxidation (M) _M(ox)IEYDPERR_ M(1)IEYDPERR M(103.83)IEYDPERR 0 1 1 O60832;C9IYT0;U5UA77;H7C0M1;H7BZF2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.7879 2 612.787512 1223.56047 NaN NaN NaN -0.17672 -0.00010829 NaN NaN NaN NaN 25 0.22576 25 24.88 25.106 0 0 0 0 3.1204E-05 1 10684 103.83 90.796 1 NaN NaN 0 13603000 13603000 0 25152 1398 9493 9726 39424 39424 1075 MIFDVESMK 9 1 0 2 Oxidation (M) _M(ox)IFDVESM(ox)K_ M(1)IFDVESM(1)K M(50.04)IFDVESM(50.04)K 0 2 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.2647 2 566.256668 1130.49878 82438.48 0.8177 0.00046303 -0.39951 -0.00022622 0.4182 0.00023681 566.256277485601 570.263785369703 56.072 0.56923 56.072 55.801 56.37 3.8147E-06 125 46 4 0 0 0 0.024699 1 31470 50.04 28.512 1 1.1063 1.1234 0 13373000 4157700 9215400 25153 139 9494 9727 39425 39425 124;125 MIFDVESMK 9 1 0 2 Oxidation (M) _M(ox)IFDVESM(ox)K_ M(1)IFDVESM(1)K M(53.97)IFDVESM(53.97)K 0 2 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.2633 2 566.256668 1130.49878 84023.98 0.56114 0.00031775 -0.42283 -0.00023943 0.13831 7.8321E-05 566.256240844651 570.263562947034 54.962 0.61123 54.962 54.777 55.388 0 140 47 4 0 0 0 0.0195 1 31462 53.968 29.074 1 1.2358 1.2687 0 11735000 5712900 6022000 25154 139 9494 9727 39426 39426 124;125 MIFDVESMKK 10 2 0 2 Oxidation (M) _M(ox)IFDVESM(ox)KK_ M(1)IFDVESM(1)KK M(95.5)IFDVESM(95.5)KK 0 2 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.3044 2 630.304149 1258.59375 NaN NaN NaN -0.091058 -5.7394E-05 NaN NaN NaN NaN 37.384 0.42779 37.384 37.158 37.586 0 0 0 0 1.4792E-05 1 18982 95.502 85.721 1 NaN NaN 0 14841000 14841000 0 25155 139 9495 9728 39427 39427 124;125 MIFDVESMKK 10 2 0 2 Oxidation (M) _M(ox)IFDVESM(ox)KK_ M(1)IFDVESM(1)KK M(88.95)IFDVESM(88.95)KK 0 2 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3185 2 630.304149 1258.59375 75683.08 0.50258 0.00031678 0.063962 4.0316E-05 0.56654 0.00035709 630.304001137217 638.318562353989 37.262 0.50543 37.262 37.004 37.51 0 148 42 5 0 0 0 6.1621E-05 2 19217 88.948 88.948 1 1.2794 1.479 0 34103000 14023000 20080000 25156 139 9495 9728 39428;39429 39428 124;125 MIICSEEEQNMDLTK 15 1 0 2 Oxidation (M) _M(ox)IICSEEEQNM(ox)DLTK_ M(1)IICSEEEQNM(1)DLTK M(40.71)IICSEEEQNM(40.71)DLTK 0 2 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 936.9069 2 936.904827 1871.7951 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.909 1 47.909 47.409 48.409 0 0 0 0 0.032489 1 26039 40.715 37.492 1 25157 1928 9496 9729 39430 39430 1762;1763 MILIQDGSQNTNVDK 15 1 0 Oxidation (M) _M(ox)ILIQDGSQNTNVDK_ M(1)ILIQDGSQNTNVDK M(68.07)ILIQDGSQNTNVDK 0 1 0 A0A087WTP3;Q92945;M0R0I5;B4DV73;M0QYH3 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.425 2 846.417076 1690.8196 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.551 1 51.551 51.051 52.051 -3.8147E-06 0 0 0 0.00072468 1 28529 68.069 52.529 1 25158 403 9497 9730 39431 39431 293 MINTDLSR 8 0 1 Oxidation (M) _M(ox)INTDLSR_ M(1)INTDLSR M(110.81)INTDLSR 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.24 2 483.239667 964.46478 85432.02 -0.33212 -0.00016049 -0.029767 -1.4385E-05 -0.36189 -0.00017488 483.239949445412 488.243613648121 29.182 0.69785 29.182 28.742 29.439 0 115 42 8 0 0 0 0.00060251 2 14044 110.81 81.431 1 1.1958 1.415 0 329700000 148840000 180860000 25159 1548 9498 9731 39432;39433 39432 1304 MINTDLSR 8 0 1 Oxidation (M) _M(ox)INTDLSR_ M(1)INTDLSR M(124.08)INTDLSR 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.24 2 483.239667 964.46478 86114.5 0.51884 0.00025072 0.27768 0.00013419 0.79652 0.00038491 483.239946392119 488.243759809045 28.468 0.49171 28.468 28.286 28.778 -1.9073E-06 187 43 8 0 0 0 0.00046275 2 13586 124.08 93.576 1 1.2194 1.4077 0 244430000 108830000 135590000 25160 1548 9498 9731 39434;39435 39434 1304 MINTDLSR 8 0 1 Oxidation (M) _M(ox)INTDLSR_ M(1)INTDLSR M(85.21)INTDLSR 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.2405 2 483.239667 964.46478 85601.27 0.51109 0.00024698 -0.18967 -9.1656E-05 0.32142 0.00015532 483.239619073781 488.24362356721 29.14 0.38792 29.14 28.993 29.381 0 104 26 8 0 0 0 0.0033487 1 14043 85.212 59.273 1 1.1794 1.3719 0 401530000 190550000 210970000 25161 1548 9498 9731 39436 39436 1304 MINTDLSR 8 0 1 Oxidation (M) _M(ox)INTDLSR_ M(1)INTDLSR M(121.99)INTDLSR 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.2397 2 483.239667 964.46478 87286.99 -0.037121 -1.7939E-05 0.10556 5.1012E-05 0.068441 3.3074E-05 483.239786514531 488.2436940618 32.965 0.56672 32.965 32.573 33.139 0 100 32 6 0 0 0 0.00047036 2 14391 121.99 92.84 1 0.72116 0.59076 0 16579000 9629000 6950300 25162 1548 9498 9731 39437;39438 39438 1304 MINTDLSR 8 0 1 Oxidation (M) _M(ox)INTDLSR_ M(1)INTDLSR M(109.86)INTDLSR 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.2399 2 483.239667 964.46478 88027.33 0.18289 8.8379E-05 0.204 9.8579E-05 0.38688 0.00018696 483.239806133807 488.243619938608 33.054 0.49865 33.054 32.715 33.213 0 98 28 6 0 0 0 0.00065196 2 13936 109.86 84.94 1 0.74692 0.60226 0 11052000 6297200 4754400 25163 1548 9498 9731 39439;39440 39439 1304 MINTDLSR 8 0 1 Unmodified _MINTDLSR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.2422 2 475.242209 948.469866 86964.24 0.23654 0.00011241 -0.33645 -0.0001599 -0.099914 -4.7483E-05 475.242117533779 480.246543652323 39.437 0.69856 39.437 39.108 39.807 0 179 57 6 0 0 0 0.0018562 1 20429 105.14 69.78 1 0.70722 0.72349 0 33260000 20515000 12745000 25164 1548 9498 9732 39441 39441 MINTDLSR 8 0 1 Unmodified _MINTDLSR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.2436 2 475.242209 948.469866 86222.7 0.22875 0.00010871 -0.2915 -0.00013853 -0.06275 -2.9821E-05 475.242345707694 480.246538704815 38.48 0.50739 38.48 38.255 38.763 0 185 43 6 0 0 0 0.0021947 2 20243 102 69.86 1 0.62258 0.70218 0 46866000 30393000 16473000 25165 1548 9498 9732 39442;39443 39443 MINTDLSR 8 0 1 Unmodified _MINTDLSR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.2461 2 475.242209 948.469866 86083.79 0.19993 9.5016E-05 -0.33686 -0.00016009 -0.13693 -6.5074E-05 475.242081391839 480.24625992171 44.783 0.79942 44.783 44.445 45.244 0 280 60 7 0 0 0 0.013762 2 21239 64.567 50.571 1 1.2581 1.0317 0 12481000 5569200 6911600 25166 1548 9498 9732 39444;39445 39444 MINTDLSR 8 0 1 Unmodified _MINTDLSR_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.2459 2 475.242209 948.469866 87348.27 0.60386 0.00028698 -0.53461 -0.00025407 0.069245 3.2908E-05 475.241943978543 480.246100736831 44.944 1.0659 44.944 44.606 45.671 0 296 75 7 0 0 0 0.056359 1 20729 41.429 33.862 1 1.2566 1.0127 0 11144000 4896200 6247400 25167 1548 9498 9732 39446 39446 MIVDPVEPHGEMK 13 1 0 2 Oxidation (M) _M(ox)IVDPVEPHGEM(ox)K_ M(1)IVDPVEPHGEM(1)K M(75.51)IVDPVEPHGEM(75.51)K 0 2 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.3638 2 757.354902 1512.69525 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.217 1 35.217 34.717 35.717 0 0 0 0 0.00099675 1 17685 75.509 54.045 1 25168 862 9499 9733 39447 39447 671;672 MIVDPVEPHGEMK 13 1 0 2 Oxidation (M) _M(ox)IVDPVEPHGEM(ox)K_ M(1)IVDPVEPHGEM(1)K M(51.09)IVDPVEPHGEM(51.09)K 0 2 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.3561 2 757.354902 1512.69525 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.316 1 35.316 34.816 35.816 0 0 0 0 0.011822 1 17745 51.092 29.628 1 25169 862 9499 9733 39448 39448 671;672 MIVDPVEPHGEMK 13 1 0 2 Oxidation (M) _M(ox)IVDPVEPHGEM(ox)K_ M(1)IVDPVEPHGEM(1)K M(83.87)IVDPVEPHGEM(83.87)K 0 2 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.364 2 757.354902 1512.69525 NaN NaN NaN 0.081329 6.1595E-05 NaN NaN NaN NaN 34.23 0.38897 34.23 34.058 34.447 0 0 0 0 9.0249E-05 1 17229 83.869 65.089 1 NaN NaN 0 8968500 0 8968500 25170 862 9499 9733 39449 39449 671;672 MKLDYILGLK 10 2 0 Oxidation (M) _M(ox)KLDYILGLK_ M(1)KLDYILGLK M(41.88)KLDYILGLK 0 1 1 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.3493 2 605.349217 1208.68388 77649.77 0.70691 0.00042793 -0.017539 -1.0617E-05 0.68937 0.00041731 605.349037995214 613.363494125796 85.18 1.1679 85.18 84.569 85.737 0 287 96 5 0 0 0 0.027395 1 51196 41.876 35.285 1 1.38 1.6292 0 53823000 25070000 28753000 25171 157 9500 9734 39450 39450 133 MKLDYILGLK 10 2 0 Oxidation (M) _M(ox)KLDYILGLK_ M(1)KLDYILGLK M(77.66)KLDYILGLK 0 1 1 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.3637 2 605.349217 1208.68388 77703.72 0.69428 0.00042028 0.57426 0.00034763 1.2685 0.00076791 605.349549433036 613.363251515591 95.607 0.9519 95.607 95.209 96.161 0 228 66 5 0 0 0 0.00085564 1 53400 77.662 77.662 1 0.49014 0.41851 0 15171000 10467000 4704100 25172 157 9500 9734 39451 39451 133 MKLPEHPEGGEPEDDEAPAK 20 2 0 Oxidation (M) _M(ox)KLPEHPEGGEPEDDEAPAK_ M(1)KLPEHPEGGEPEDDEAPAK M(74.78)KLPEHPEGGEPEDDEAPAK 0 1 1 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.0096 3 731.331919 2190.97393 70434.55 0.59399 0.0004344 0.051359 3.756E-05 0.64535 0.00047196 731.666113148308 736.6748619259 25.495 0.33768 25.495 25.296 25.633 0 98 18 7 0 0 0 3.4716E-07 1 11043 74.776 74.776 1 1.175 1.4005 0 18050000 8595600 9454100 25173 2079 9501 9735 39452 39452 1911 MKLPEHPEGGEPEDDEAPAK 20 2 0 Oxidation (M) _M(ox)KLPEHPEGGEPEDDEAPAK_ M(1)KLPEHPEGGEPEDDEAPAK M(69.12)KLPEHPEGGEPEDDEAPAK 0 1 1 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.6648 3 731.331919 2190.97393 70418.59 0.47624 0.00034829 -0.33414 -0.00024437 0.1421 0.00010392 731.665764460335 736.674718611126 25.772 0.32962 25.772 25.594 25.923 0 117 17 8 0 0 0 5.4042E-07 1 11262 69.122 65.518 1 1.0825 1.2783 0 34076000 17207000 16869000 25174 2079 9501 9735 39453 39453 1911 MKLPEHPEGGEPEDDEAPAK 20 2 0 Oxidation (M) _M(ox)KLPEHPEGGEPEDDEAPAK_ M(1)KLPEHPEGGEPEDDEAPAK M(89.48)KLPEHPEGGEPEDDEAPAK 0 1 1 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.0093 3 731.331919 2190.97393 71443.33 0.67942 0.00049688 -0.49006 -0.00035839 0.18936 0.00013848 731.665700790337 736.674751126516 25.03 0.48129 25.03 24.738 25.219 0 133 19 10 0 0 0 2.056E-09 2 10511 89.483 85.879 1 1.1303 1.3088 0 51587000 22857000 28730000 25175 2079 9501 9735 39454;39455 39454 1911 MKVELCSFSGYK 12 2 0 Oxidation (M) _M(ox)KVELCSFSGYK_ M(1)KVELCSFSGYK M(81.02)KVELCSFSGYK 0 1 1 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8459 2 732.846713 1463.67887 71169.12 0.55671 0.00040799 -0.33796 -0.00024767 0.21875 0.00016031 732.846731441964 740.860954408862 56.558 0.49949 56.559 56.298 56.797 3.8147E-06 172 43 8 0 0 0 0.00017908 2 31856 81.017 69.852 1 0.84422 1.0052 0 22342000 11920000 10422000 25176 1140 9502 9736 39456;39457 39457 852 MKVELCSFSGYK 12 2 0 Oxidation (M) _M(ox)KVELCSFSGYK_ M(1)KVELCSFSGYK M(41.11)KVELCSFSGYK 0 1 1 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.847 2 732.846713 1463.67887 69078.02 0.83376 0.00061102 -0.99885 -0.000732 -0.16509 -0.00012099 732.846376950905 740.85999035223 65.549 0.46484 65.549 65.285 65.75 0 185 34 7 0 0 0 0.01524 1 33868 41.109 38.355 1 1.0458 0.90123 0 5705800 2822600 2883200 25177 1140 9502 9736 39458 39458 852 MLADDAEAGAEDEK 14 1 0 Oxidation (M) _M(ox)LADDAEAGAEDEK_ M(1)LADDAEAGAEDEK M(64.44)LADDAEAGAEDEK 0 1 0 M0QY97;Q9UPT8 M0QY97 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8155 2 740.809036 1479.60352 NaN NaN NaN 1.6799 0.0012445 NaN NaN NaN NaN 26.853 0.15986 26.853 26.745 26.905 0 0 0 0 0.00086883 1 12240 64.439 56.214 1 NaN NaN 0 1820100 0 1820100 25178 1352 9503 9737 39459 39459 1011 MLAEDELR 8 0 1 Oxidation (M) _M(ox)LAEDELR_ M(1)LAEDELR M(66.07)LAEDELR 0 1 0 A0A024R3Q3;A0A024R0Y6;F5H423;P84077;P61204;B4E190 A0A024R3Q3 A0A024R3Q3 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.7432 2 496.739499 991.464446 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.573 1 35.573 35.073 36.073 0 0 0 0 0.010735 1 18147 66.073 16.715 1 25179 62 9504 9738 39460 39460 35 MLAEREEALEEADELDR 17 0 2 Oxidation (M) _M(ox)LAEREEALEEADELDR_ M(1)LAEREEALEEADELDR M(40.84)LAEREEALEEADELDR 0 1 1 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1;B3KQ09 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.6735 3 678.980998 2033.92116 75940.77 0.45727 0.00031048 -0.66619 -0.00045233 -0.20893 -0.00014186 679.315106527955 685.986734982606 68.381 0.55301 68.381 68.133 68.686 0 146 47 4 0 0 0 0.0024571 1 39606 40.844 34.116 1 0.7105 0.76647 0 17387000 7387100 9999700 25180 80 9505 9739 39461 39461 49 MLAEREEALEEADELDR 17 0 2 Oxidation (M) _M(ox)LAEREEALEEADELDR_ M(1)LAEREEALEEADELDR M(117.4)LAEREEALEEADELDR 0 1 1 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1;B3KQ09 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.6737 3 678.980998 2033.92116 74419.55 0.39381 0.00026739 0.14855 0.00010086 0.54236 0.00036825 679.315239619158 685.653317472365 66.977 0.52866 66.977 66.701 67.23 0 205 45 6 0 0 0 7.1249E-20 1 39600 117.4 96.663 1 0.94652 1.054 0 24857000 12791000 12066000 25181 80 9505 9739 39462 39462 49 MLAIYDGFDGFAK 13 1 0 Oxidation (M) _M(ox)LAIYDGFDGFAK_ M(1)LAIYDGFDGFAK M(78.65)LAIYDGFDGFAK 0 1 0 Q01813;Q8WTZ9;O14943;B1APP6;H0Y3Y3 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.3554 2 732.347403 1462.68025 72945.58 1.0883 0.00079702 -0.24295 -0.00017793 0.84535 0.00061909 732.347593780604 736.354201451195 108.72 0.50924 108.72 108.52 109.03 7.6294E-06 114 33 8 0 0 0 6.1475E-05 1 67925 78.653 78.653 1 3.323 3.2547 0 22015000 4975400 17039000 25182 1677 9506 9740 39463 39463 1476 MLAIYDGFDGFAK 13 1 0 Oxidation (M) _M(ox)LAIYDGFDGFAK_ M(1)LAIYDGFDGFAK M(60.52)LAIYDGFDGFAK 0 1 0 Q01813;Q8WTZ9;O14943;B1APP6;H0Y3Y3 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.3568 2 732.347403 1462.68025 NaN NaN NaN -0.12576 -9.2096E-05 NaN NaN NaN NaN 108.24 0.50798 108.24 107.93 108.44 0 0 0 0 0.0014583 2 69356 60.518 47.495 1 NaN NaN 0 11759000 0 11759000 25183 1677 9506 9740 39464;39465 39465 1476 MLALALLDR 9 0 1 Oxidation (M) _M(ox)LALALLDR_ M(1)LALALLDR M(64.26)LALALLDR 0 1 0 Q92621;B4DE72;Q6P486;U3KPX2 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.3044 2 516.299527 1030.5845 NaN NaN NaN -0.25839 -0.00013341 NaN NaN NaN NaN 100.95 0.22207 100.95 100.79 101.01 0 0 0 0 0.004091 1 61986 64.265 22.612 1 NaN NaN 0 3635300 0 3635300 25184 1950 9507 9741 39466 39466 1796 MLALALLDR 9 0 1 Oxidation (M) _M(ox)LALALLDR_ M(1)LALALLDR M(56.26)LALALLDR 0 1 0 Q92621;B4DE72;Q6P486;U3KPX2 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.3049 2 516.299527 1030.5845 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.16 1 100.16 99.662 100.66 0 0 0 0 0.0091425 1 62893 56.258 14.606 1 25185 1950 9507 9741 39467 39467 1796 MLALGNQVGK 10 1 0 Oxidation (M) _M(ox)LALGNQVGK_ M(1)LALGNQVGK M(68.21)LALGNQVGK 0 1 0 O75530;E9PJK2;H0YEL4;E9PMU3 O75530 O75530 EED Polycomb protein EED ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.7943 2 523.786784 1045.55902 NaN NaN NaN 0.43158 0.00022606 NaN NaN NaN NaN 40.55 0.28476 40.55 40.409 40.694 0 0 0 0 0.0017352 1 21667 68.214 44.691 1 NaN NaN 0 13788000 0 13788000 25186 1407 9508 9742 39468 39468 1085 MLATLEPEQR 10 0 1 Oxidation (M) _M(ox)LATLEPEQR_ M(1)LATLEPEQR M(89.7)LATLEPEQR 0 1 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.3099 2 602.305538 1202.59652 NaN NaN NaN -0.15052 -9.0659E-05 NaN NaN NaN NaN 44.67 0.54768 44.67 44.24 44.788 0 0 0 0 0.00023484 1 23850 89.698 36.532 1 NaN NaN 0 10797000 0 10797000 25187 1611 9509 9743 39469 39469 1400 MLATLEPEQR 10 0 1 Oxidation (M) _M(ox)LATLEPEQR_ M(1)LATLEPEQR M(69.81)LATLEPEQR 0 1 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.3101 2 602.305538 1202.59652 77021.91 1.0396 0.00062614 -0.30118 -0.0001814 0.7384 0.00044474 602.305740204087 607.308968147719 44.005 0.71173 44.005 43.517 44.228 0 153 59 5 0 0 0 0.0011043 1 23739 69.812 55.675 1 2.7133 2.8624 0 23381000 7499200 15882000 25188 1611 9509 9743 39470 39470 1400 MLDEGMMLEGFR 12 0 1 2 Oxidation (M) _M(ox)LDEGM(ox)MLEGFR_ M(1)LDEGM(0.5)M(0.5)LEGFR M(48.08)LDEGM(0)M(0)LEGFR 0 2 0 Q86V15 Q86V15 Q86V15 CASZ1 Zinc finger protein castor homolog 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.8232 2 730.814555 1459.61456 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.568 1 27.568 27.068 28.068 0 0 0 0 0.017922 1 12848 50.123 22.502 3 25189 1885 9510 9744 39471 39471 1728;1729;1730 MLDEYFEEQMK 11 1 0 2 Oxidation (M) _M(ox)LDEYFEEQM(ox)K_ M(1)LDEYFEEQM(1)K M(77.68)LDEYFEEQM(77.68)K 0 2 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.8163 2 747.809993 1493.60543 NaN NaN NaN 0.010552 7.8912E-06 NaN NaN NaN NaN 61.485 0.67429 61.485 61.163 61.837 -3.8147E-06 0 0 0 0.00040105 1 35378 77.677 67.99 1 NaN NaN 0 6346100 0 6346100 25190 899;1099 9511 9745 39472 39472 721;722 MLDFFTIFSK 10 1 0 Oxidation (M) _M(ox)LDFFTIFSK_ M(1)LDFFTIFSK M(70.06)LDFFTIFSK 0 1 0 Q6IAX9;P08240 Q6IAX9 Q6IAX9 SRPR Signal recognition particle receptor subunit alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8255 2 632.81775 1263.62095 NaN NaN NaN 0.033604 2.1265E-05 NaN NaN NaN NaN 128.01 0.3537 128.01 127.81 128.16 0 0 0 0 0.0015886 1 85469 70.056 36.26 1 NaN NaN 0 1715900 0 1715900 25191 1455 9512 9746 39473 39473 1166 MLDHEYTTK 9 1 0 Oxidation (M) _M(ox)LDHEYTTK_ M(1)LDHEYTTK M(109.71)LDHEYTTK 0 1 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.2639 2 577.263339 1152.51212 79031.74 0.2362 0.00013635 -0.063934 -3.6907E-05 0.17226 9.9442E-05 577.263586543477 581.270325516484 17.381 0.84879 17.381 17.021 17.869 0 152 28 10 0 0 0 5.3199E-05 2 4574 109.71 78.425 1 1.5556 1.7995 0 229420000 86704000 142710000 25192 1470 9513 9747 39474;39475 39475 1188 MLDHEYTTK 9 1 0 Oxidation (M) _M(ox)LDHEYTTK_ M(1)LDHEYTTK M(59.91)LDHEYTTK 0 1 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 387.8497 3 385.177985 1152.51212 95554.09 -0.13968 -5.3802E-05 -0.016163 -6.2257E-06 -0.15584 -6.0027E-05 385.178002278858 387.849325094797 17.383 0.78746 17.383 17.021 17.808 0 112 26 9 0 0 0 0.0024686 2 4554 59.908 51.053 1 1.5195 1.6699 0 54145000 20155000 33990000 25193 1470 9513 9747 39476;39477 39477 1188 MLDHEYTTK 9 1 0 Oxidation (M) _M(ox)LDHEYTTK_ M(1)LDHEYTTK M(67.51)LDHEYTTK 0 1 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.2635 2 577.263339 1152.51212 79025.8 0.10626 6.1341E-05 0.30452 0.00017579 0.41078 0.00023713 577.263501674425 581.270580466958 18.44 0.50545 18.44 18.16 18.666 0 112 23 8 0 0 0 0.0024852 2 4409 67.507 50.122 1 1.1657 0.92242 0 6213800 2949000 3264800 25194 1470 9513 9747 39478;39479 39479 1188 MLDHEYTTK 9 1 0 Oxidation (M) _M(ox)LDHEYTTK_ M(1)LDHEYTTK M(49.44)LDHEYTTK 0 1 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.2619 2 577.263339 1152.51212 81228.59 0.33192 0.0001916 0.51338 0.00029635 0.84529 0.00048796 577.263212881612 581.270751097596 23.344 0.51972 23.344 23.124 23.643 0 110 25 6 0 0 0 0.010408 1 7827 49.444 27.313 1 1.6595 1.3086 0 5508000 2111200 3396800 25195 1470 9513 9747 39480 39480 1188 MLDHEYTTK 9 1 0 Oxidation (M) _M(ox)LDHEYTTK_ M(1)LDHEYTTK M(64.48)LDHEYTTK 0 1 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.2631 2 577.263339 1152.51212 76942.8 0.24401 0.00014086 -0.016778 -9.6855E-06 0.22723 0.00013117 577.263210887655 581.270437451097 23.198 0.46249 23.198 23.023 23.485 0 80 20 6 0 0 0 0.0030628 1 7284 64.485 42.353 1 1.6396 1.3393 0 5620200 1949300 3670900 25196 1470 9513 9747 39481 39481 1188 MLDHEYTTK 9 1 0 Unmodified _MLDHEYTTK_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.2734 2 569.265881 1136.51721 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.201 1 21.201 20.701 21.701 0 0 0 0 0.00055698 1 7380 102.07 69.747 1 25197 1470 9513 9748 39482 39482 MLDHEYTTK 9 1 0 Unmodified _MLDHEYTTK_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.2665 2 569.265881 1136.51721 80076.65 0.34709 0.00019759 0.45605 0.00025961 0.80314 0.0004572 569.266013546144 573.273309867991 23.354 0.70554 23.354 23.032 23.738 -1.9073E-06 189 34 8 0 0 0 1.711E-06 2 7846 136.21 93.085 1 1.5812 1.239 0 16650000 6522900 10127000 25198 1470 9513 9748 39483;39484 39484 MLDHEYTTK 9 1 0 Unmodified _MLDHEYTTK_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 382.5172 3 379.846346 1136.51721 96134.48 0.022806 8.6627E-06 -0.23036 -8.7503E-05 -0.20756 -7.884E-05 379.846187579419 382.517613735094 23.355 0.66142 23.355 23.1 23.762 0 135 32 7 0 0 0 0.039314 1 7839 26.957 19.311 1 1.6562 1.3245 0 8856300 3163600 5692700 25199 1470 9513 9748 39485 39485 MLDHEYTTK 9 1 0 Unmodified _MLDHEYTTK_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;D3DWJ7;E5RJ95;E5RFS0;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.2662 2 569.265881 1136.51721 79212.81 0.28443 0.00016192 -0.071096 -4.0472E-05 0.21334 0.00012145 569.265833927867 573.272918524899 23.224 0.73816 23.224 22.942 23.68 0 169 35 8 0 0 0 2.3878E-05 2 7256 114.89 82.959 1 1.6572 1.3297 0 18449000 6860100 11588000 25200 1470 9513 9748 39486;39487 39487 MLDILAEYLK 10 1 0 Oxidation (M) _M(ox)LDILAEYLK_ M(1)LDILAEYLK M(81.97)LDILAEYLK 0 1 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8304 2 612.830857 1223.64716 79270 0.63245 0.00038758 0.058444 3.5817E-05 0.69089 0.0004234 612.830825336298 616.838049542257 116.66 0.51837 116.66 116.44 116.96 -7.6294E-06 135 34 6 0 0 0 0.00035925 2 74483 81.972 81.972 1 1.1062 1.1543 0 12223000 6595600 5627100 25201 1366 9514 9749 39488;39489 39489 1033 MLDILAEYLK 10 1 0 Oxidation (M) _M(ox)LDILAEYLK_ M(1)LDILAEYLK M(84.21)LDILAEYLK 0 1 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8386 2 612.830857 1223.64716 78599.95 0.50992 0.00031249 0.16635 0.00010195 0.67627 0.00041444 612.830828291651 616.838077223779 116.1 0.53717 116.1 115.88 116.42 0 145 34 6 0 0 0 0.00029191 2 75816 84.213 84.213 1 1.108 1.1368 0 11766000 5574500 6191500 25202 1366 9514 9749 39490;39491 39491 1033 MLDILAEYLK 10 1 0 Oxidation (M) _M(ox)LDILAEYLK_ M(1)LDILAEYLK M(53.75)LDILAEYLK 0 1 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.3333 2 612.830857 1223.64716 79922.08 0.89193 0.0005466 0.20568 0.00012605 1.0976 0.00067265 612.830841661356 616.838189531916 128.59 0.44849 128.59 128.4 128.84 1.5259E-05 64 19 5 0 0 0 0.0049155 1 77636 53.751 48.968 1 0.49523 0.41635 0 1594500 1020500 573970 25203 1366 9514 9749 39492 39492 1033 MLDILAEYLK 10 1 0 Unmodified _MLDILAEYLK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.8337 2 604.8334 1207.65225 NaN NaN NaN 0.14828 8.9687E-05 NaN NaN NaN NaN 125.36 0.28505 125.36 125.14 125.42 0 0 0 0 0.0022377 1 81400 81.594 60.088 1 NaN NaN 0 1319100 1319100 0 25204 1366 9514 9750 39493 39493 MLDILAEYLK 10 1 0 Unmodified _MLDILAEYLK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.3348 2 604.8334 1207.65225 82089.03 1.0758 0.00065071 -0.26733 -0.00016169 0.80851 0.00048901 604.833205455803 608.840240203548 124.84 0.3797 124.84 124.64 125.02 7.6294E-06 70 26 4 0 0 0 0.007051 2 83028 57.96 57.96 1 0.57538 0.63536 0 2445100 1225900 1219200 25205 1366 9514 9750 39494;39495 39494 MLDILAEYLTIK 12 1 0 Oxidation (M) _M(ox)LDILAEYLTIK_ M(1)LDILAEYLTIK M(70.98)LDILAEYLTIK 0 1 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.8971 2 719.896728 1437.7789 80843.95 1.087 0.0007825 -0.12969 -9.336E-05 0.95728 0.00068914 720.397334824285 723.903878707547 126.52 0.36314 126.52 126.37 126.73 7.6294E-06 82 26 5 0 0 0 0.00021251 2 82326 70.977 70.977 1 2.2589 2.445 0 3431100 1603000 1828200 25206 354 9515 9751 39496;39497 39497 264 MLDILAEYLTIK 12 1 0 Oxidation (M) _M(ox)LDILAEYLTIK_ M(1)LDILAEYLTIK M(91.55)LDILAEYLTIK 0 1 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.9044 2 719.896728 1437.7789 NaN NaN NaN 0.74042 0.00053303 NaN NaN NaN NaN 126.08 0.35445 126.08 125.93 126.28 0 0 0 0 6.1218E-05 1 84125 91.549 75.92 1 NaN NaN 0 3545900 0 3545900 25207 354 9515 9751 39498 39498 264 MLDLLEDFLEHEGYK 15 1 0 Oxidation (M) _M(ox)LDLLEDFLEHEGYK_ M(1)LDLLEDFLEHEGYK M(59.86)LDLLEDFLEHEGYK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.6326 3 623.297599 1866.87097 76442.65 0.82751 0.00051579 -0.14396 -8.9731E-05 0.68355 0.00042606 623.631849049787 626.303372777505 123.85 0.67327 123.85 123.55 124.22 0 340 47 10 0 0 0 8.2844E-05 2 80273 59.862 59.862 1 1.2964 1.414 0 50132000 22145000 27987000 25208 515 9516 9752 39499;39500 39500 378 MLDLLEDFLEHEGYK 15 1 0 Oxidation (M) _M(ox)LDLLEDFLEHEGYK_ M(1)LDLLEDFLEHEGYK M(97.8)LDLLEDFLEHEGYK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.9702 3 623.297599 1866.87097 76068.37 0.83529 0.00052063 -0.15703 -9.7876E-05 0.67826 0.00042276 623.631979550719 626.303235288897 123.31 0.79533 123.31 122.97 123.77 0 404 57 10 0 0 0 9.1718E-07 2 81728 97.797 97.797 1 1.1934 1.3101 0 41515000 17366000 24149000 25209 515 9516 9752 39501;39502 39501 378 MLDMGFEPQIR 11 0 1 2 Oxidation (M) _M(ox)LDM(ox)GFEPQIR_ M(1)LDM(1)GFEPQIR M(66.57)LDM(66.57)GFEPQIR 0 2 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010;B4E132;B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1;Q59F66;Q92841;B4DZQ7 A0A0D9SFB3;B4DN41;Q59F66 B4DN41 DDX3X;DDX3Y;DDX5;DKFZp686J01190;DDX17 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.8179 2 684.817955 1367.62136 73512.46 0.62373 0.00042714 -0.049374 -3.3812E-05 0.57435 0.00039333 684.818179811885 689.822270684499 72.078 0.96748 72.078 71.596 72.563 0 415 77 8 0 0 0 0.0018633 2 42024 66.568 66.568 1 2.5659 2.7441 0 45136000 13865000 31270000 25210 1009;522;1801 9517 9753 39503;39504 39504 383;384 MLDMGFEPQIR 11 0 1 2 Oxidation (M) _M(ox)LDM(ox)GFEPQIR_ M(1)LDM(1)GFEPQIR M(77.68)LDM(77.68)GFEPQIR 0 2 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010;B4E132;B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1;Q59F66;Q92841;B4DZQ7 A0A0D9SFB3;B4DN41;Q59F66 B4DN41 DDX3X;DDX3Y;DDX5;DKFZp686J01190;DDX17 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8226 2 684.817955 1367.62136 73234.55 0.59372 0.00040659 -0.11008 -7.5382E-05 0.48364 0.00033121 684.81828671271 689.822173075067 70.901 1.0099 70.901 70.315 71.325 0 349 78 7 0 0 0 0.00053549 3 42251 77.677 77.677 1 2.6994 3.126 0 67081000 18282000 48799000 25211 1009;522;1801 9517 9753 39505;39506;39507 39505 383;384 MLDNFDCFGDK 11 1 0 Oxidation (M) _M(ox)LDNFDCFGDK_ M(1)LDNFDCFGDK M(77.38)LDNFDCFGDK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.283 2 689.27612 1376.53769 73687.91 0.75018 0.00051708 0.04187 2.886E-05 0.79205 0.00054594 689.276249755064 693.28335284037 71.839 0.93794 71.839 71.368 72.306 0 332 77 6 0 0 0 0.00021909 2 41800 77.379 77.379 1 1.2156 1.1995 0 25033000 9193200 15840000 25212 908 9518 9754 39508;39509 39508 743 MLDNFDCFGDK 11 1 0 Oxidation (M) _M(ox)LDNFDCFGDK_ M(1)LDNFDCFGDK M(74.84)LDNFDCFGDK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.2769 2 689.27612 1376.53769 73867.01 0.68231 0.0004703 -0.13523 -9.3207E-05 0.54708 0.00037709 689.276167337285 693.283217255308 70.795 0.94543 70.795 70.266 71.212 0 340 73 6 0 0 0 0.00023476 2 42248 74.841 74.841 1 1.2959 1.3712 0 23572000 10378000 13194000 25213 908 9518 9754 39510;39511 39511 743 MLDNFDCFGDK 11 1 0 Oxidation (M) _M(ox)LDNFDCFGDK_ M(1)LDNFDCFGDK M(50.28)LDNFDCFGDK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.2835 2 689.27612 1376.53769 72982.94 0.4979 0.00034319 0.021396 1.4748E-05 0.5193 0.00035794 689.276205505878 693.283375768851 81.682 0.83496 81.682 81.481 82.316 0 247 48 6 0 0 0 0.0042269 1 44403 50.284 50.284 1 1.2181 0.96045 0 5521900 2461100 3060800 25214 908 9518 9754 39512 39512 743 MLDNFDCFGDK 11 1 0 Oxidation (M) _M(ox)LDNFDCFGDK_ M(1)LDNFDCFGDK M(66.6)LDNFDCFGDK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.2838 2 689.27612 1376.53769 73456.13 0.43661 0.00030095 -0.10117 -6.9731E-05 0.33545 0.00023122 689.276171034063 693.283327935468 82.146 1.0587 82.146 81.669 82.728 0 288 61 7 0 0 0 0.00075417 1 43628 66.595 66.595 1 1.1852 0.96462 0 4549500 2036800 2512700 25215 908 9518 9754 39513 39513 743 MLDNFDCFGDK 11 1 0 Unmodified _MLDNFDCFGDK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.286 2 681.278663 1360.54277 73926.13 0.84493 0.00057563 -0.11041 -7.5222E-05 0.73452 0.00050041 681.278724812829 685.285799312628 96.215 0.65573 96.215 95.962 96.618 -7.6294E-06 169 40 6 0 0 0 0.010239 1 53973 48.981 48.981 1 1.6121 1.2524 0 3430300 1318400 2111900 25216 908 9518 9755 39514 39514 MLEPPPSAK 9 1 0 Oxidation (M) _M(ox)LEPPPSAK_ M(1)LEPPPSAK M(51.85)LEPPPSAK 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.2614 2 493.254785 984.495018 NaN NaN NaN 0.14696 7.2488E-05 NaN NaN NaN NaN 28.244 0.93513 28.244 27.73 28.665 0 0 0 0 0.010908 1 11201 51.854 22.281 1 NaN NaN 0 1187400 0 1187400 25217 1421 9519 9756 39515 39515 1116 MLEQLDMR 8 0 1 2 Oxidation (M) _M(ox)LEQLDM(ox)R_ M(1)LEQLDM(1)R M(99)LEQLDM(99)R 0 2 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;B4DIJ6;F6UJC5;A0A140TA18;B4DIZ8;O00148;K7EQN7;A0A024R7H0;K7EPJ3 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.2488 2 534.246634 1066.47872 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.944 1 29.944 29.444 30.444 1.9073E-06 0 0 0 0.0021373 1 14573 98.997 31.962 1 25218 1359;362 9520 9757 39516 39516 269;270 MLEQLDMR 8 0 1 2 Oxidation (M) _M(ox)LEQLDM(ox)R_ M(1)LEQLDM(1)R M(64.21)LEQLDM(64.21)R 0 2 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;B4DIJ6;F6UJC5;A0A140TA18;B4DIZ8;O00148;K7EQN7;A0A024R7H0;K7EPJ3 A0A024RCM3;O00148 O00148 hCG_2005638;DDX39B;DDX39A;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.7523 2 534.246634 1066.47872 NaN NaN NaN -0.13379 -7.1476E-05 NaN NaN NaN NaN 29.544 0.20498 29.544 29.425 29.63 -1.9073E-06 0 0 0 0.0041521 1 14230 64.207 23.635 1 NaN NaN 0 6111800 0 6111800 25219 1359;362 9520 9757 39517 39517 269;270 MLESITNELSLFSK 14 1 0 Oxidation (M) _M(ox)LESITNELSLFSK_ M(1)LESITNELSLFSK M(42.74)LESITNELSLFSK 0 1 0 Q96F86;H3BPN4 Q96F86 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.426 2 814.416014 1626.81747 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.22 1 117.22 116.72 117.72 0 0 0 0 0.015102 1 74981 42.743 15.629 1 25220 1964 9521 9758 39518 39518 1808 MLFDLLVNCK 10 1 0 Oxidation (M) _M(ox)LFDLLVNCK_ M(1)LFDLLVNCK M(81.55)LFDLLVNCK 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.8302 2 634.822509 1267.63047 79763.93 0.56608 0.00035936 0.10587 6.7209E-05 0.67195 0.00042657 634.822502784927 638.82961905456 110.91 0.39194 110.91 110.72 111.12 7.6294E-06 91 29 4 0 0 0 0.00037199 1 71558 81.548 81.548 1 1.8796 1.8787 0 6630300 2836600 3793600 25221 897 9522 9759 39519 39519 713 MLFDLLVNCK 10 1 0 Unmodified _MLFDLLVNCK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.8325 2 626.825052 1251.63555 78245.63 0.59468 0.00037276 -0.00018798 -1.1783E-07 0.5945 0.00037264 626.825352179471 630.832455204883 131.04 0.65967 131.04 130.77 131.43 0 100 28 6 0 0 0 0.0041076 2 79564 61.962 60.676 1 1.2697 1.0734 0 2016700 1002600 1014100 25222 897 9522 9760 39520;39521 39521 MLFDLLVNCK 10 1 0 Unmodified _MLFDLLVNCK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.8324 2 626.825052 1251.63555 79233.15 0.94215 0.00059057 0.11271 7.0652E-05 1.0549 0.00066122 626.825359425048 630.832168559592 130.76 0.49748 130.76 130.58 131.08 0 70 21 5 0 0 0 0.004316 2 78490 61.679 56.895 1 1.2921 1.008 0 3464200 1359400 2104800 25223 897 9522 9760 39522;39523 39523 MLGEALSK 8 1 0 Oxidation (M) _M(ox)LGEALSK_ M(1)LGEALSK M(74.26)LGEALSK 0 1 0 J3KPX7;Q99623;F5GY37;Q9BXV3 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.728 2 432.728403 863.442254 90221.7 -0.0078079 -3.3787E-06 -0.0043474 -1.8812E-06 -0.012155 -5.2599E-06 432.728212374607 436.735405138965 29.057 0.36518 29.057 28.776 29.141 -1.9073E-06 58 18 5 0 0 0 0.0046323 2 13923 74.255 34.609 1 2.0771 2.355 0 93834000 31005000 62829000 25224 1328 9523 9761 39524;39525 39524 1004 MLGEALSK 8 1 0 Oxidation (M) _M(ox)LGEALSK_ M(1)LGEALSK M(86.83)LGEALSK 0 1 0 J3KPX7;Q99623;F5GY37;Q9BXV3 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 432.7293 2 432.728403 863.442254 93543.27 0.025863 1.1192E-05 0.33205 0.00014369 0.35791 0.00015488 432.728389847184 436.73560238381 28.318 0.3101 28.318 28.13 28.44 -1.9073E-06 74 16 7 0 0 0 0.0031667 2 13532 86.833 36.713 1 1.9087 2.1339 0 105420000 34114000 71308000 25225 1328 9523 9761 39526;39527 39527 1004 MLGKDEDENVK 11 2 0 Oxidation (M) _M(ox)LGKDEDENVK_ M(1)LGKDEDENVK M(67.21)LGKDEDENVK 0 1 1 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3179 2 647.303192 1292.59183 75999.11 0.65425 0.0004235 1.0456 0.00067682 1.6999 0.0011003 647.3046336394 655.317450468948 16.736 0.52995 16.736 16.551 17.081 0 57 19 6 0 0 0 0.0012526 1 3961 67.207 67.207 1 0.88573 0.9809 0 3910500 1533500 2377000 25226 790 9524 9762 39528 39528 632 MLIAMVDVIFADVAQPDQTR 20 0 1 2 Oxidation (M) _M(ox)LIAM(ox)VDVIFADVAQPDQTR_ M(1)LIAM(1)VDVIFADVAQPDQTR M(50.56)LIAM(50.56)VDVIFADVAQPDQTR 0 2 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1138.5726 2 1133.06632 2264.11809 56830.41 0.49631 0.00056235 0.8348 0.00094589 1.3311 0.0015082 1133.56838122712 1138.57264408518 126.81 0.46686 126.81 126.58 127.05 7.6294E-06 136 30 7 0 0 0 9.1094E-06 1 82619 50.562 50.562 1 2.1369 2.2141 0 5849200 1826500 4022700 25227 1506 9525 9763 39529 39529 1271;1272 MLIAMVDVIFADVAQPDQTR 20 0 1 2 Oxidation (M) _M(ox)LIAM(ox)VDVIFADVAQPDQTR_ M(1)LIAM(1)VDVIFADVAQPDQTR M(107.14)LIAM(107.14)VDVIFADVAQPDQTR 0 2 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1138.5717 2 1133.06632 2264.11809 NaN NaN NaN 0.22531 0.00025529 NaN NaN NaN NaN 126.31 0.44041 126.31 126.13 126.57 0 0 0 0 1.3821E-18 2 82185 107.14 85.582 1 NaN NaN 0 6245500 0 6245500 25228 1506 9525 9763 39530;39531 39531 1271;1272 MLIAMVDVIFADVAQPDQTR 20 0 1 2 Oxidation (M) _M(ox)LIAM(ox)VDVIFADVAQPDQTR_ M(1)LIAM(1)VDVIFADVAQPDQTR M(51.64)LIAM(51.64)VDVIFADVAQPDQTR 0 2 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1138.5742 2 1133.06632 2264.11809 NaN NaN NaN 1.4518 0.001645 NaN NaN NaN NaN 134.72 0.27393 134.72 134.53 134.8 0 0 0 0 9.4584E-05 1 82387 51.643 39.478 1 NaN NaN 0 6485900 0 6485900 25229 1506 9525 9763 39532 39532 1271;1272 MLIDFSYLLSK 11 1 0 Oxidation (M) _M(ox)LIDFSYLLSK_ M(1)LIDFSYLLSK M(83)LIDFSYLLSK 0 1 0 O95251;E7EUP3;B7Z4D9;B3KVJ2;B4DJ40;B4DG18;B4DGH8 O95251 O95251 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.3655 2 673.357239 1344.69993 76432.93 0.85156 0.00057341 -0.21706 -0.00014616 0.63451 0.00042725 673.356904729151 677.364166823783 123.7 0.49611 123.7 123.46 123.95 0 160 34 6 0 0 0 0.00018438 2 80172 83 83 1 1.1095 1.1357 0 10547000 4806500 5740400 25230 1422 9526 9764 39533;39534 39533 1120 MLIDFSYLLSK 11 1 0 Oxidation (M) _M(ox)LIDFSYLLSK_ M(1)LIDFSYLLSK M(75.51)LIDFSYLLSK 0 1 0 O95251;E7EUP3;B7Z4D9;B3KVJ2;B4DJ40;B4DG18;B4DGH8 O95251 O95251 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3588 2 673.357239 1344.69993 75788.27 0.91937 0.00061907 0.0042161 2.839E-06 0.92359 0.0006219 673.858682177914 677.364198341462 123.25 0.56702 123.25 123.04 123.61 7.6294E-06 193 42 6 0 0 0 0.00023064 2 81863 75.509 75.509 1 1.1217 1.1555 0 11575000 5883700 5691700 25231 1422 9526 9764 39535;39536 39536 1120 MLIYDPAK 8 1 0 Oxidation (M) _M(ox)LIYDPAK_ M(1)LIYDPAK M(75.85)LIYDPAK 0 1 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.752 2 483.751879 965.489204 88587.31 -0.036274 -1.7548E-05 0.18255 8.8311E-05 0.14628 7.0764E-05 483.751844397368 487.759130635663 53.229 0.9962 53.229 52.659 53.655 3.8147E-06 201 75 4 0 0 0 0.0043994 2 29761 75.854 47.342 1 1.7113 1.7658 0 29018000 10782000 18236000 25232 25 9527 9765 39537;39538 39537 13 MLIYDPAK 8 1 0 Oxidation (M) _M(ox)LIYDPAK_ M(1)LIYDPAK M(63.48)LIYDPAK 0 1 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.7515 2 483.751879 965.489204 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.651 1 51.651 51.151 52.151 0 0 0 0 0.013209 1 29326 63.48 34.967 1 25233 25 9527 9765 39539 39539 13 MLLQSSEGR 9 0 1 Oxidation (M) _M(ox)LLQSSEGR_ M(1)LLQSSEGR M(82.53)LLQSSEGR 0 1 0 O75643;A4FU77;B4E150 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.7623 2 518.758223 1035.50189 NaN NaN NaN 0.59695 0.00030967 NaN NaN NaN NaN 24.983 0.47268 24.983 24.655 25.128 0 0 0 0 0.00065314 1 10643 82.529 55.005 1 NaN NaN 0 13966000 0 13966000 25234 1411 9528 9766 39540 39540 1096 MLLSAGR 7 0 1 Oxidation (M) _M(ox)LLSAGR_ M(1)LLSAGR M(127.1)LLSAGR 0 1 0 Q15061;C9IZK7;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 382.2095 2 382.210181 762.405809 97334.27 0.086613 3.3104E-05 -0.64251 -0.00024558 -0.5559 -0.00021247 382.209641200586 387.21427596231 27.914 0.51621 27.914 27.762 28.278 -1.9073E-06 104 34 5 0 0 0 0.0043419 1 13074 127.1 50.544 1 1.5473 1.7449 0 99309000 43561000 55748000 25235 1752 9529 9767 39541 39541 1603 MLLSAGR 7 0 1 Oxidation (M) _M(ox)LLSAGR_ M(1)LLSAGR M(122.15)LLSAGR 0 1 0 Q15061;C9IZK7;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 382.2097 2 382.210181 762.405809 96778.41 -0.078223 -2.9897E-05 -0.24322 -9.2961E-05 -0.32144 -0.00012286 382.209953777491 387.214159100995 27.51 0.47467 27.51 27.32 27.795 0 61 24 4 0 0 0 0.0049371 2 12802 122.15 54.778 1 1.4512 1.6652 0 80512000 37672000 42840000 25236 1752 9529 9767 39542;39543 39543 1603 MLLSLR 6 0 1 Oxidation (M) _M(ox)LLSLR_ M(1)LLSLR M(66.99)LLSLR 0 1 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.7266 2 374.722924 747.431295 100976.8 0.44448 0.00016656 -0.11587 -4.342E-05 0.32861 0.00012314 374.722766679995 379.726960111583 60.356 0.66598 60.356 60.135 60.801 3.8147E-06 164 60 4 0 0 0 0.030518 1 34381 66.994 8.3328 1 1.3532 1.391 0 19525000 8620200 10905000 25237 1741 9530 9768 39544 39544 1584 MLLSPGGVSQPLTASLAR 18 0 1 Oxidation (M) _M(ox)LLSPGGVSQPLTASLAR_ M(1)LLSPGGVSQPLTASLAR M(85.84)LLSPGGVSQPLTASLAR 0 1 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.0023 2 907.495661 1812.97677 NaN NaN NaN 0.33233 0.00030159 NaN NaN NaN NaN 103.62 0.44633 103.62 103.45 103.89 0 0 0 0 9.3304E-10 1 65630 85.845 61.502 1 NaN NaN 0 7657800 0 7657800 25238 1307 9531 9769 39545 39545 990 MLLSPGGVSQPLTASLAR 18 0 1 Oxidation (M) _M(ox)LLSPGGVSQPLTASLAR_ M(1)LLSPGGVSQPLTASLAR M(61.38)LLSPGGVSQPLTASLAR 0 1 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 907.4945 2 907.495661 1812.97677 64640.74 0.7128 0.00064686 -0.58488 -0.00053078 0.12792 0.00011609 907.99697478743 913.000596427286 116.02 0.38985 116.02 115.82 116.21 0 82 15 8 0 0 0 1.8931E-05 1 68064 61.375 49.509 1 0.47176 0.40567 0 6773100 4727900 2045200 25239 1307 9531 9769 39546 39546 990 MLLSPGGVSQPLTASLAR 18 0 1 Oxidation (M) _M(ox)LLSPGGVSQPLTASLAR_ M(1)LLSPGGVSQPLTASLAR M(64.65)LLSPGGVSQPLTASLAR 0 1 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 907.9975 2 907.495661 1812.97677 64249.5 0.62936 0.00057114 -0.54858 -0.00049783 0.080786 7.3313E-05 907.495524956331 913.000325226582 115.82 0.37183 115.82 115.66 116.03 0 103 17 8 0 0 0 1.5801E-05 1 66996 64.65 55.921 1 0.50799 0.41985 0 8102700 4940300 3162400 25240 1307 9531 9769 39547 39547 990 MLLVDELR 8 0 1 Oxidation (M) _M(ox)LLVDELR_ M(1)LLVDELR M(86.95)LLVDELR 0 1 0 P18085;C9JPM4;C9JAK5;U3KQF2 P18085 P18085 ARF4 ADP-ribosylation factor 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.7802 2 502.775885 1003.53722 NaN NaN NaN 0.2694 0.00013545 NaN NaN NaN NaN 80.894 0.60001 80.894 80.604 81.204 0 0 0 0 0.0018243 1 48071 86.953 38.45 1 NaN NaN 0 19637000 0 19637000 25241 1498 9532 9770 39548 39548 1253 MLLVDELR 8 0 1 Oxidation (M) _M(ox)LLVDELR_ M(1)LLVDELR M(52.79)LLVDELR 0 1 0 P18085;C9JPM4;C9JAK5;U3KQF2 P18085 P18085 ARF4 ADP-ribosylation factor 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.7764 2 502.775885 1003.53722 NaN NaN NaN 0.15924 8.0062E-05 NaN NaN NaN NaN 79.789 0.58101 79.789 79.436 80.017 0 0 0 0 0.013315 1 48542 52.786 25.824 1 NaN NaN 0 6127600 6127600 0 25242 1498 9532 9770 39549 39549 1253 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDK 32 1 0 2 Oxidation (M) _M(ox)LPHAPGVQM(ox)QAIPEDAVHEDSGDEDGEDPDK_ M(1)LPHAPGVQM(1)QAIPEDAVHEDSGDEDGEDPDK M(70.45)LPHAPGVQM(70.45)QAIPEDAVHEDSGDEDGEDPDK 0 2 0 Q92769;B3KUJ5;Q59GB9 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.379 4 866.124053 3460.46711 NaN NaN NaN -0.3095 -0.00026806 NaN NaN NaN NaN 66.843 0.40689 66.843 66.636 67.043 0 0 0 0 6.008E-19 2 38559 70.451 68.705 1 NaN NaN 0 7052600 0 7052600 25243 1952 9533 9771 39550;39551 39551 1799;1800 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDK 32 1 0 2 Oxidation (M) _M(ox)LPHAPGVQM(ox)QAIPEDAVHEDSGDEDGEDPDK_ M(1)LPHAPGVQM(1)QAIPEDAVHEDSGDEDGEDPDK M(76.16)LPHAPGVQM(76.16)QAIPEDAVHEDSGDEDGEDPDK 0 2 0 Q92769;B3KUJ5;Q59GB9 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.6299 4 866.124053 3460.46711 NaN NaN NaN 0.18952 0.00016415 NaN NaN NaN NaN 65.709 0.39708 65.709 65.54 65.938 0 0 0 0 2.5682E-19 1 38736 76.162 75.664 1 NaN NaN 0 10840000 0 10840000 25244 1952 9533 9771 39552 39552 1799;1800 MLPLIWSK 8 1 0 Unmodified _MLPLIWSK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.2957 2 494.288431 986.562309 88460.89 0.43971 0.00021734 0.15139 7.4831E-05 0.5911 0.00029217 494.288422050619 498.295507618409 118.74 0.57375 118.74 118.51 119.09 7.6294E-06 96 28 5 0 0 0 0.060096 1 70271 40.067 40.067 1 1.9132 1.5709 0 2413000 846740 1566300 25245 908 9534 9772 39553 39553 MLPTLGGEEGVSR 13 0 1 Oxidation (M) _M(ox)LPTLGGEEGVSR_ M(1)LPTLGGEEGVSR M(40.59)LPTLGGEEGVSR 0 1 0 Q9Y5Q8;Q5T7U1 Q9Y5Q8 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3403 2 681.340109 1360.66566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.815 1 64.815 64.315 65.315 0 0 0 0 0.026038 1 37275 40.589 19.688 1 25246 2149 9535 9773 39554 39554 2000 MLQGESAEAFVAK 13 1 0 Oxidation (M) _M(ox)LQGESAEAFVAK_ M(1)LQGESAEAFVAK M(116.23)LQGESAEAFVAK 0 1 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.8416 2 698.842484 1395.67042 NaN NaN NaN -0.030972 -2.1644E-05 NaN NaN NaN NaN 58.507 0.35807 58.507 58.303 58.661 0 0 0 0 4.9231E-10 1 33135 116.23 87.146 1 NaN NaN 0 13285000 13285000 0 25247 925 9536 9774 39555 39555 760 MLQGESAEAFVAK 13 1 0 Oxidation (M) _M(ox)LQGESAEAFVAK_ M(1)LQGESAEAFVAK M(89.27)LQGESAEAFVAK 0 1 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.3799 2 698.842484 1395.67042 71937.98 0.73445 0.00051326 0.8392 0.00058647 1.5736 0.0010997 698.843003869979 702.84985887122 57.638 0.37722 57.638 57.53 57.907 3.8147E-06 115 29 7 0 0 0 0.00052129 1 33418 89.266 81.031 1 1.3183 1.4504 0 42586000 17932000 24654000 25248 925 9536 9774 39556 39556 760 MLQGESAEAFVAK 13 1 0 Oxidation (M) _M(ox)LQGESAEAFVAK_ M(1)LQGESAEAFVAK M(54.49)LQGESAEAFVAK 0 1 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.8508 2 698.842484 1395.67042 73214.89 0.49443 0.00034553 -0.73423 -0.00051311 -0.23979 -0.00016758 699.342864305281 702.849774200675 69.042 0.46868 69.042 68.83 69.299 0 130 33 6 0 0 0 0.0010943 1 35308 54.486 53.419 1 1.0656 0.84067 0 3904500 1933000 1971500 25249 925 9536 9774 39557 39557 760 MLQHIDYR 8 0 1 Oxidation (M) _M(ox)LQHIDYR_ M(1)LQHIDYR M(101.54)LQHIDYR 0 1 0 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q53HE7;Q9UIS4;Q15182;P63162;P14678;J3KRY3;S4R3P3 J3QLE5 J3QLE5 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.2736 2 546.268758 1090.52296 82331.8 0.61786 0.00033752 -0.18287 -9.9894E-05 0.43499 0.00023762 546.268682900178 551.272691942293 25.353 0.43687 25.353 25.106 25.543 0 72 16 7 0 0 0 0.0010873 1 10938 101.54 92.679 1 1.7649 1.7813 0 19691000 7575600 12116000 25250 1041 9537 9775 39558 39558 815 MLQPCGPPADKPEEN 15 1 0 Oxidation (M) _M(ox)LQPCGPPADKPEEN_ M(1)LQPCGPPADKPEEN M(55.4)LQPCGPPADKPEEN 0 1 1 Q9BWJ5 Q9BWJ5 Q9BWJ5 SF3B5 Splicing factor 3B subunit 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 853.8845 2 849.87673 1697.73891 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.306 1 34.306 33.806 34.806 0 0 0 0 0.0046561 1 17351 55.401 41.194 1 25251 2012 9538 9776 39559 39559 1850 MLQTDPTARPTINELLNDEFFTSGYIPAR 29 0 2 Oxidation (M) _M(ox)LQTDPTARPTINELLNDEFFTSGYIPAR_ M(1)LQTDPTARPTINELLNDEFFTSGYIPAR M(44.6)LQTDPTARPTINELLNDEFFTSGYIPAR 0 1 1 P53350;B2R841;B4E083;Q59GD0;D3DWF3;I3L2H5 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1116.8934 3 1109.55024 3325.62889 57679.38 0.41759 0.00046333 0.61516 0.00068255 1.0328 0.0011459 1110.21987636264 1116.55828376715 124.16 0.4978 124.16 123.87 124.37 0 178 33 8 0 0 0 3.0111E-07 1 82464 44.596 44.596 1 1.6084 1.7466 0 17626000 7247700 10379000 25252 1604 9539 9777 39560 39560 1390 MLSALLTGVNR 11 0 1 Oxidation (M) _M(ox)LSALLTGVNR_ M(1)LSALLTGVNR M(106.18)LSALLTGVNR 0 1 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.8375 2 595.831723 1189.64889 82356.14 0.89986 0.00053616 0.89037 0.00053051 1.7902 0.0010667 595.831792902766 600.836872942936 82.01 0.69084 82.01 81.721 82.412 0 212 59 5 0 0 0 8.1259E-06 2 48898 106.18 80.619 1 1.4791 1.5461 0 13159000 5309700 7849100 25253 836;1683 9540 9778 39561;39562 39561 663 MLSALLTGVNR 11 0 1 Oxidation (M) _M(ox)LSALLTGVNR_ M(1)LSALLTGVNR M(114.5)LSALLTGVNR 0 1 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.8376 2 595.831723 1189.64889 80788.71 0.93431 0.00055669 0.27994 0.0001668 1.2142 0.00072349 595.831819118582 600.836352528648 80.925 0.59133 80.925 80.625 81.216 0 169 48 6 0 0 0 3.3156E-08 1 49284 114.5 85.769 1 1.5456 1.5747 0 20591000 8036300 12555000 25254 836;1683 9540 9778 39563 39563 663 MLSCAGADR 9 0 1 Unmodified _MLSCAGADR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.7194 2 490.718044 979.421535 NaN NaN NaN 0.68849 0.00033786 NaN NaN NaN NaN 21.381 0.30037 21.381 21.258 21.558 0 0 0 0 0.0019632 1 7730 83.265 43.722 1 NaN NaN 0 5597800 5597800 0 25255 1524;1266 9541 9779 39564 39564 MLSCAGADR 9 0 1 Unmodified _MLSCAGADR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.7221 2 490.718044 979.421535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.37 1 21.37 20.87 21.87 0 0 0 0 0.013328 1 7678 60.436 31.924 1 25256 1524;1266 9541 9779 39565 39565 MLSCAGADR 9 0 1 Unmodified _MLSCAGADR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.7222 2 490.718044 979.421535 86242.18 0.045952 2.2549E-05 0.12285 6.0285E-05 0.1688 8.2835E-05 490.71809500031 495.722173337407 23.166 0.37441 23.166 23.01 23.385 1.9073E-06 63 17 6 0 0 0 0.0035543 2 7729 71.501 38.574 1 1.2321 1.0484 0 5392800 2337100 3055700 25257 1524;1266 9541 9779 39566;39567 39566 MLTAQDMSYDEAR 13 0 1 2 Oxidation (M) _M(ox)LTAQDM(ox)SYDEAR_ M(1)LTAQDM(1)SYDEAR M(50.11)LTAQDM(50.11)SYDEAR 0 2 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.8311 2 781.826705 1561.63886 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.988 1 31.988 31.488 32.488 0 0 0 0 0.013008 1 15816 50.108 43.418 1 25258 415 9542 9780 39568 39568 303;304 MLVDDIGDVTITNDGATILK 20 1 0 Oxidation (M) _M(ox)LVDDIGDVTITNDGATILK_ M(1)LVDDIGDVTITNDGATILK M(79.63)LVDDIGDVTITNDGATILK 0 1 0 P17987;F5H136;E7ERF2;F5H726;F5GZI8;F5H676 P17987 P17987 TCP1 T-complex protein 1 subunit alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1064.5483 2 1060.5432 2119.07185 NaN NaN NaN 0.90327 0.00095796 NaN NaN NaN NaN 115.76 0.33809 115.76 115.52 115.85 0 0 0 0 2.1219E-08 2 73709 79.633 70.904 1 NaN NaN 0 4797000 0 4797000 25259 1496 9543 9781 39569;39570 39570 1251 MLVDDIGDVTITNDGATILK 20 1 0 Oxidation (M) _M(ox)LVDDIGDVTITNDGATILK_ M(1)LVDDIGDVTITNDGATILK M(87.18)LVDDIGDVTITNDGATILK 0 1 0 P17987;F5H136;E7ERF2;F5H726;F5GZI8;F5H676 P17987 P17987 TCP1 T-complex protein 1 subunit alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.5521 2 1060.5432 2119.07185 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.19 1 115.19 114.69 115.69 0 0 0 0 5.6954E-08 1 75106 87.18 74.819 1 25260 1496 9543 9781 39571 39571 1251 MLVLDEADEMLNK 13 1 0 2 Oxidation (M) _M(ox)LVLDEADEM(ox)LNK_ M(1)LVLDEADEM(1)LNK M(40.59)LVLDEADEM(40.59)LNK 0 2 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.8719 2 776.865299 1551.71605 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.579 1 74.579 74.079 75.079 0 0 0 0 0.045606 1 44893 40.589 24.015 1 25261 261 9544 9782 39572 39572 199;200 MLVSGQGPVMENAQGLGFR 19 0 1 2 Oxidation (M) _M(ox)LVSGQGPVM(ox)ENAQGLGFR_ M(1)LVSGQGPVM(1)ENAQGLGFR M(58.67)LVSGQGPVM(58.67)ENAQGLGFR 0 2 0 Q9BXW7 Q9BXW7 Q9BXW7 CECR5 Cat eye syndrome critical region protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1016.994 2 1011.99042 2021.96628 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.872 1 82.872 82.372 83.372 0 0 0 0 0.00022441 1 49557 58.674 46.314 1 25262 2015 9545 9783 39573 39573 1851;1852 MLVTFDEELRPLPVSVR 17 0 2 Oxidation (M) _M(ox)LVTFDEELRPLPVSVR_ M(1)LVTFDEELRPLPVSVR M(61.73)LVTFDEELRPLPVSVR 0 1 1 Q59EG8;Q13200;B4DM22;Q13041 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.0378 3 673.031076 2016.0714 73724.74 0.83276 0.00056048 -0.036622 -2.4648E-05 0.79614 0.00053583 673.030746830054 679.703299193274 109.29 0.57407 109.29 108.97 109.54 -7.6294E-06 137 38 6 0 0 0 2.0966E-05 1 68369 61.732 61.732 1 3.3823 3.6496 0 17707000 4550100 13157000 25263 1707 9546 9784 39574 39574 1539 MLVTFDEELRPLPVSVR 17 0 2 Oxidation (M) _M(ox)LVTFDEELRPLPVSVR_ M(1)LVTFDEELRPLPVSVR M(60.47)LVTFDEELRPLPVSVR 0 1 1 Q59EG8;Q13200;B4DM22;Q13041 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.0384 3 673.031076 2016.0714 75669.17 0.58445 0.00039335 0.066708 4.4896E-05 0.65115 0.00043825 673.364883823236 679.703198016502 108.61 0.55225 108.61 108.3 108.85 0 152 37 6 0 0 0 2.4014E-05 1 69562 60.474 60.474 1 3.68 4.0682 0 22509000 7275300 15234000 25264 1707 9546 9784 39575 39575 1539 MLYLIGLGLGDAK 13 1 0 Oxidation (M) _M(ox)LYLIGLGLGDAK_ M(1)LYLIGLGLGDAK M(44.86)LYLIGLGLGDAK 0 1 0 Q9H2P9 Q9H2P9 Q9H2P9 DPH5 Diphthine synthase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.0204 2 690.383788 1378.75302 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.83 1 117.83 117.33 118.33 0 0 0 0 0.011032 1 75504 44.863 17.121 1 25265 2026 9547 9785 39576 39576 1864 MMVAGFK 7 1 0 Oxidation (M) _MM(ox)VAGFK_ M(0.113)M(0.887)VAGFK M(-8.96)M(8.96)VAGFK 0 1 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.1956 2 400.195685 798.376817 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.046 1 43.046 42.546 43.546 0 0 0 0 0.048826 1 22983 48.174 19.535 2 25266 999 9548 9786 39577 39577 792 MNAQETATGMAFEEPIDEK 19 1 0 2 Oxidation (M) _M(ox)NAQETATGM(ox)AFEEPIDEK_ M(1)NAQETATGM(1)AFEEPIDEK M(109.84)NAQETATGM(109.84)AFEEPIDEK 0 2 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1076.4655 2 1072.46155 2142.90855 NaN NaN NaN 1.2405 0.0013304 NaN NaN NaN NaN 65.442 0.4021 65.442 65.212 65.614 0 0 0 0 5.1745E-18 1 37675 109.84 101.53 1 NaN NaN 0 7506300 0 7506300 25267 1388 9549 9787 39578 39578 1058;1059 MNCYALIR 8 0 1 Oxidation (M) _M(ox)NCYALIR_ M(1)NCYALIR M(69.18)NCYALIR 0 1 0 B3KMS0;Q15021;B4E0B7;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.756 2 528.751887 1055.48922 84098.16 0.45839 0.00024237 0.076136 4.0257E-05 0.53452 0.00028263 528.752250410275 533.756065130388 51.966 0.65476 51.966 51.623 52.278 -3.8147E-06 186 52 5 0 0 0 0.0056993 2 28771 69.176 53.795 1 0.91569 0.9343 0 30752000 14870000 15882000 25268 908 9550 9788 39579;39580 39579 744 MNCYALIR 8 0 1 Oxidation (M) _M(ox)NCYALIR_ M(1)NCYALIR M(79.12)NCYALIR 0 1 0 B3KMS0;Q15021;B4E0B7;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.7525 2 528.751887 1055.48922 82745.35 0.49922 0.00026396 -0.20628 -0.00010907 0.29294 0.00015489 528.752165516904 533.755801369905 50.589 0.49505 50.589 50.369 50.864 0 129 42 4 0 0 0 0.0040332 1 28591 79.116 60.34 1 1.1096 1.2043 0 28073000 11164000 16909000 25269 908 9550 9788 39581 39581 744 MNCYALIR 8 0 1 Oxidation (M) _M(ox)NCYALIR_ M(1)NCYALIR M(48.76)NCYALIR 0 1 0 B3KMS0;Q15021;B4E0B7;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.7563 2 528.751887 1055.48922 82799.9 0.34829 0.00018416 -0.72505 -0.00038337 -0.37676 -0.00019921 528.75168761946 533.755534930608 60.165 0.73465 60.165 59.67 60.405 0 180 52 6 0 0 0 0.017567 1 29998 48.756 38.618 1 1.2317 1.0545 0 3298000 1320600 1977300 25270 908 9550 9788 39582 39582 744 MNCYALIR 8 0 1 Unmodified _MNCYALIR_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.7588 2 520.75443 1039.49431 84961.73 0.29173 0.00015192 -0.088812 -4.6249E-05 0.20292 0.00010567 520.754514241102 525.758399232889 73.051 0.56013 73.051 72.785 73.346 0 113 35 4 0 0 0 0.016959 1 38613 60.76 41.283 1 1.5965 1.3869 0 2243300 999090 1244200 25271 908 9550 9789 39583 39583 MNEEISSDSESESLAPR 17 0 1 Oxidation (M) _M(ox)NEEISSDSESESLAPR_ M(1)NEEISSDSESESLAPR M(117.7)NEEISSDSESESLAPR 0 1 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 953.9146 2 948.910009 1895.80547 62516.8 0.63948 0.00060681 -0.049219 -4.6705E-05 0.59026 0.0005601 948.910214132377 954.415365982147 48.942 0.53951 48.942 48.648 49.188 0 161 41 5 0 0 0 5.9204E-13 2 26647 117.7 116.71 1 1.783 1.8133 0 18417000 5902400 12515000 25272 1389 9551 9790 39584;39585 39584 1060 MNEEISSDSESESLAPR 17 0 1 Oxidation (M) _M(ox)NEEISSDSESESLAPR_ M(1)NEEISSDSESESLAPR M(139.46)NEEISSDSESESLAPR 0 1 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 953.9136 2 948.910009 1895.80547 65362.88 0.38501 0.00036534 -0.17464 -0.00016572 0.21037 0.00019962 948.909661363415 953.914167730379 47.956 0.40456 47.956 47.718 48.123 0 113 27 6 0 0 0 2.5052E-25 3 26658 139.46 137.32 1 1.8716 1.854 0 12194000 4468600 7725700 25273 1389 9551 9790 39586;39587;39588 39587 1060 MNEVISLWK 9 1 0 Oxidation (M) _M(ox)NEVISLWK_ M(1)NEVISLWK M(76.1)NEVISLWK 0 1 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.3022 2 568.294442 1134.57433 83516.7 0.9959 0.00056597 -0.12437 -7.0678E-05 0.87154 0.00049529 568.294271142329 572.300526123468 87.899 0.12568 87.899 87.794 87.919 0 16 7 4 0 0 0 0.0010431 1 54208 76.1 66.512 1 1.6867 1.7364 0 11603000 3561800 8041300 25274 523 9552 9791 39589 39589 386 MNGPADGEVDYKK 13 2 0 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)NGPADGEVDYKK_ M(1)NGPADGEVDYKK M(76.33)NGPADGEVDYKK 1 1 1 Q8NBZ0;J3KNE2;H3BNM4;I3NI13;I3L270 Q8NBZ0 Q8NBZ0 INO80E INO80 complex subunit E MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.3325 2 741.332481 1480.65041 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.391 1 28.391 27.891 28.891 1.9073E-06 0 0 0 0.00016549 1 13392 76.332 67.373 1 25275 1921 9553 9792 39590 39590 1749 MNGPADGEVDYKK 13 2 0 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)NGPADGEVDYKK_ M(1)NGPADGEVDYKK M(79.66)NGPADGEVDYKK 1 1 1 Q8NBZ0;J3KNE2;H3BNM4;I3NI13;I3L270 Q8NBZ0 Q8NBZ0 INO80E INO80 complex subunit E MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.347 2 741.332481 1480.65041 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.395 1 28.395 27.895 28.895 0 0 0 0 0.00012236 1 13396 79.659 69.972 1 25276 1921 9553 9792 39591 39591 1749 MNGPADGEVDYKK 13 2 0 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)NGPADGEVDYKK_ M(1)NGPADGEVDYKK M(87.57)NGPADGEVDYKK 1 1 1 Q8NBZ0;J3KNE2;H3BNM4;I3NI13;I3L270 Q8NBZ0 Q8NBZ0 INO80E INO80 complex subunit E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.3481 2 741.332481 1480.65041 74750.6 0.35397 0.00026241 0.26067 0.00019324 0.61464 0.00045565 741.332534835731 749.346606940297 27.734 0.26168 27.734 27.609 27.871 -1.9073E-06 39 13 5 0 0 0 2.4007E-05 2 13006 87.568 83.714 1 0.81205 0.92473 0 9291500 5022800 4268800 25277 1921 9553 9792 39592;39593 39593 1749 MNLASSFVNGFVNAAFGQDK 20 1 0 Oxidation (M) _M(ox)NLASSFVNGFVNAAFGQDK_ M(1)NLASSFVNGFVNAAFGQDK M(51.55)NLASSFVNGFVNAAFGQDK 0 1 0 Q59EG8;Q13200;B4DM22;Q9NSM5 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1071.5139 2 1067.00712 2131.99969 NaN NaN NaN -0.66945 -0.00071431 NaN NaN NaN NaN 130.75 0.48312 130.75 130.5 130.98 0 0 0 0 0.0001591 1 85176 51.546 43.822 1 NaN NaN 0 3160500 0 3160500 25278 1707 9554 9793 39594 39594 1540 MNSGPPGLGGK 11 1 0 Oxidation (M) _M(ox)NSGPPGLGGK_ M(1)NSGPPGLGGK M(128.6)NSGPPGLGGK 0 1 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.7601 2 515.752941 1029.49133 83781.89 0.67703 0.00034918 -0.21944 -0.00011318 0.45758 0.000236 515.752690852681 519.759822539979 24.398 0.75208 24.398 24.061 24.813 0 112 31 7 0 0 0 2.8859E-10 2 10032 128.6 114.44 1 1.1059 1.2487 0 80641000 42921000 37719000 25279 1750 9555 9794 39595;39596 39595 1599 MNSGPPGLGGK 11 1 0 Oxidation (M) _M(ox)NSGPPGLGGK_ M(1)NSGPPGLGGK M(103.19)NSGPPGLGGK 0 1 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7603 2 515.752941 1029.49133 83416.61 0.092104 4.7503E-05 0.12666 6.5328E-05 0.21877 0.00011283 515.752800971103 519.76000334077 24.075 0.56576 24.075 23.77 24.335 0 91 21 7 0 0 0 1.1836E-05 2 9832 103.19 94.42 1 1.1266 1.2631 0 54782000 26999000 27783000 25280 1750 9555 9794 39597;39598 39597 1599 MNTCVPHPR 9 0 1 Oxidation (M) _M(ox)NTCVPHPR_ M(1)NTCVPHPR M(48.28)NTCVPHPR 0 1 0 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.2621 2 564.257868 1126.50118 NaN NaN NaN 0.10288 5.8048E-05 NaN NaN NaN NaN 17.793 0.30803 17.793 17.683 17.991 0 0 0 0 0.014358 1 4938 48.283 37.869 1 NaN NaN 0 2735900 0 2735900 25281 491 9556 9795 39599 39599 338 MNVEEDVQEEQSK 13 1 0 Oxidation (M) _M(ox)NVEEDVQEEQSK_ M(1)NVEEDVQEEQSK M(221.55)NVEEDVQEEQSK 0 1 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.8487 2 790.840867 1579.66718 68214.61 0.62319 0.00049284 -0.25742 -0.00020358 0.36577 0.00028926 790.840855769485 794.847797824923 27.459 0.44806 27.459 27.209 27.657 -1.9073E-06 166 26 9 0 0 0 4.4952E-75 2 12675 221.55 217.87 1 1.2188 1.3132 0 41109000 19537000 21572000 25282 790 9557 9796 39600;39601 39601 633 MNVEEDVQEEQSK 13 1 0 Oxidation (M) _M(ox)NVEEDVQEEQSK_ M(1)NVEEDVQEEQSK M(231.17)NVEEDVQEEQSK 0 1 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.8484 2 790.840867 1579.66718 67528.37 0.88923 0.00070324 -0.1421 -0.00011238 0.74713 0.00059086 790.8407979609 794.847668661392 27.026 0.40125 27.026 26.804 27.205 0 116 18 8 0 0 0 3.1045E-89 2 12344 231.17 226.65 1 1.2202 1.3519 0 46637000 19992000 26645000 25283 790 9557 9796 39602;39603 39603 633 MNVEEDVQEEQSK 13 1 0 Oxidation (M) _M(ox)NVEEDVQEEQSK_ M(1)NVEEDVQEEQSK M(70.73)NVEEDVQEEQSK 0 1 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.8412 2 790.840867 1579.66718 68310.11 0.40652 0.0003215 -0.091898 -7.2677E-05 0.31463 0.00024882 790.840960611043 794.848010811809 31.939 0.37807 31.939 31.767 32.145 -1.9073E-06 138 20 9 0 0 0 9.4624E-05 1 13584 70.728 70.118 1 1.2428 0.96465 0 12762000 5713100 7048800 25284 790 9557 9796 39604 39604 633 MNVEEDVQEEQSK 13 1 0 Oxidation (M) _M(ox)NVEEDVQEEQSK_ M(1)NVEEDVQEEQSK M(84.48)NVEEDVQEEQSK 0 1 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 790.8411 2 790.840867 1579.66718 68743.4 0.6683 0.00052852 -0.2612 -0.00020657 0.4071 0.00032195 790.840804691221 794.847834349772 32.182 0.41531 32.182 32.024 32.44 0 132 21 9 0 0 0 7.2756E-05 2 13272 84.479 84.037 1 1.1692 0.96048 0 9544300 4024000 5520300 25285 790 9557 9796 39605;39606 39606 633 MNVEEDVQEEQSK 13 1 0 Unmodified _MNVEEDVQEEQSK_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 786.8525 2 782.84341 1563.67227 69777.88 0.39525 0.00030942 0.48186 0.00037722 0.87712 0.00068665 782.844046454828 786.85087700689 47.008 0.57081 47.008 46.784 47.354 3.8147E-06 176 44 5 0 0 0 0.032306 1 22663 33.088 33.088 1 1.5528 1.2064 0 3601500 1607100 1994400 25286 790 9557 9797 39607 39607 MNVLADALK 9 1 0 Oxidation (M) _M(ox)NVLADALK_ M(1)NVLADALK M(101.54)NVLADALK 0 1 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.775 2 495.76806 989.521567 79822.18 0.26777 0.00013275 0.17731 8.7907E-05 0.44509 0.00022066 495.768148313154 499.775169946283 69.23 1.4863 69.23 68.657 70.143 0 629 130 9 0 0 0 0.00016426 4 40529 101.54 76.619 1 1.1572 1.3344 0 215890000 98571000 117310000 25287 831 9558 9798 39608;39609;39610;39611 39610 660 MNVLADALK 9 1 0 Oxidation (M) _M(ox)NVLADALK_ M(1)NVLADALK M(93.18)NVLADALK 0 1 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.7682 2 495.76806 989.521567 81025.14 0.13292 6.5897E-05 0.30443 0.00015093 0.43735 0.00021682 495.768164986938 499.775255904167 67.834 1.4112 67.834 67.375 68.786 0 585 118 8 0 0 0 0.0004225 4 40101 93.178 65.071 1 1.1448 1.3294 0 227100000 107870000 119240000 25288 831 9558 9798 39612;39613;39614;39615 39613 660 MNVLADALK 9 1 0 Oxidation (M) _M(ox)NVLADALK_ M(1)NVLADALK M(70.26)NVLADALK 0 1 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.7757 2 495.76806 989.521567 84348.47 0.22761 0.00011284 0.1924 9.5387E-05 0.42001 0.00020823 495.768124990579 499.775194449374 79.109 1.6693 79.109 78.618 80.287 0 470 100 7 0 0 0 0.00196 2 42505 70.256 44.519 1 0.76835 0.62323 0 25934000 14298000 11635000 25289 831 9558 9798 39616;39617 39616 660 MNVLADALK 9 1 0 Oxidation (M) _M(ox)NVLADALK_ M(1)NVLADALK M(56.43)NVLADALK 0 1 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 499.7752 2 495.76806 989.521567 84277.13 0.061397 3.0438E-05 0.50469 0.00025021 0.56608 0.00028065 495.768257394953 499.775363534871 79.268 1.7277 79.268 78.728 80.456 -7.6294E-06 438 104 7 0 0 0 0.0065866 3 41682 56.434 30.697 1 0.77108 0.62208 0 23287000 13122000 10165000 25290 831 9558 9798 39618;39619;39620 39618 660 MNVLADALK 9 1 0 Unmodified _MNVLADALK_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.7773 2 487.770603 973.526652 NaN NaN NaN -0.098329 -4.7962E-05 NaN NaN NaN NaN 83.936 0.52151 83.936 83.625 84.147 0 0 0 0 0.021307 1 50102 57.859 44.187 1 NaN NaN 0 16915000 0 16915000 25291 831 9558 9799 39621 39621 MNVLADALK 9 1 0 Unmodified _MNVLADALK_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.7708 2 487.770603 973.526652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.765 1 83.765 83.265 84.265 0 0 0 0 0.0056247 1 50158 67.897 49.912 1 25292 831 9558 9799 39622 39622 MNVLADALK 9 1 0 Unmodified _MNVLADALK_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.771 2 487.770603 973.526652 87284.39 0.22188 0.00010823 -0.034589 -1.6871E-05 0.18729 9.1355E-05 487.770489475436 491.777512536352 82.723 0.72195 82.723 82.393 83.115 7.6294E-06 228 57 6 0 0 0 0.0049758 2 50537 67.897 53.973 1 0.51768 0.58342 0 68159000 43409000 24750000 25293 831 9558 9799 39623;39624 39624 MNVLADALK 9 1 0 Unmodified _MNVLADALK_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.2726 2 487.770603 973.526652 85997.27 0.43278 0.0002111 0.50708 0.00024734 0.93986 0.00045844 487.770711688664 491.777528274041 95.888 1.576 95.888 95.18 96.756 0 428 104 8 0 0 0 0.019835 2 53739 50.805 39.736 1 0.92101 0.74837 0 28413000 12829000 15585000 25294 831 9558 9799 39625;39626 39626 MNVLADALK 9 1 0 Unmodified _MNVLADALK_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3;I3L246;H3BN98;H3BV27;H3BT37;I3L303 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.7777 2 487.770603 973.526652 NaN NaN NaN 0.18978 9.2571E-05 NaN NaN NaN NaN 95.771 1.0352 95.771 95.427 96.462 7.6294E-06 0 0 0 0.0085799 1 52757 67.897 52.458 1 NaN NaN 0 12616000 0 12616000 25295 831 9558 9799 39627 39627 MNVSPDVNYEELAR 14 0 1 Oxidation (M) _M(ox)NVSPDVNYEELAR_ M(1)NVSPDVNYEELAR M(48)NVSPDVNYEELAR 0 1 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.8844 2 826.882869 1651.75119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.36 1 75.36 74.86 75.86 0 0 0 0 0.0065799 1 45402 48.004 15.995 1 25296 617 9559 9800 39628 39628 467 MNVSPDVNYEELAR 14 0 1 Oxidation (M) _M(ox)NVSPDVNYEELAR_ M(1)NVSPDVNYEELAR M(49.63)NVSPDVNYEELAR 0 1 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.8861 2 826.882869 1651.75119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.369 1 75.369 74.869 75.869 0 0 0 0 0.0056769 1 45408 49.632 25.34 1 25297 617 9559 9800 39629 39629 467 MNVSPDVNYEELAR 14 0 1 Oxidation (M) _M(ox)NVSPDVNYEELAR_ M(1)NVSPDVNYEELAR M(64.55)NVSPDVNYEELAR 0 1 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.8862 2 826.882869 1651.75119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.481 1 75.481 74.981 75.981 0 0 0 0 0.0010519 1 45485 64.55 47.384 1 25298 617 9559 9800 39630 39630 467 MNVTPEVK 8 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)NVTPEVK_ M(1)NVTPEVK M(42.11)NVTPEVK 1 1 0 Q5T3I0;A8KAG1;A0A0A0MRK1;F8W895;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 975.4829 1 975.481559 974.474282 63244.54 -0.048251 -4.7068E-05 0.19951 0.00019462 0.15126 0.00014755 975.481938813854 983.495760611336 45.699 0.6282 45.699 45.302 45.931 0 120 54 4 0 0 0 0.013308 1 24745 42.109 32.895 1 1.1728 1.2385 0 16314000 7521200 8793000 25299 1820 9560 9801 39631 39631 1679 MNVTPEVK 8 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)NVTPEVK_ M(1)NVTPEVK M(64.26)NVTPEVK 1 1 0 Q5T3I0;A8KAG1;A0A0A0MRK1;F8W895;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.4825 1 975.481559 974.474282 62172.3 0.3286 0.00032054 0.08824 8.6077E-05 0.41684 0.00040662 975.481625121951 983.495903091324 44.847 0.60628 44.847 44.555 45.162 0 139 47 4 0 0 0 0.0033929 1 24634 64.265 54.677 1 1.4587 1.4917 0 17389000 6921000 10468000 25300 1820 9560 9801 39632 39632 1679 MPCQSLQPEPINTPTHTK 18 1 0 Oxidation (M) _M(ox)PCQSLQPEPINTPTHTK_ M(1)PCQSLQPEPINTPTHTK M(77.48)PCQSLQPEPINTPTHTK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.6754 3 699.00308 2093.98741 71671.57 0.90455 0.00063229 -0.43547 -0.0003044 0.46908 0.00032789 699.003092503038 701.674347775511 44.685 0.70394 44.685 44.301 45.005 0 384 62 8 0 0 0 3.3754E-06 2 23908 77.478 77.478 1 2.1542 2.4169 0 66666000 26401000 40265000 25301 1569 9561 9802 39633;39634 39634 1336 MPCQSLQPEPINTPTHTK 18 1 0 Oxidation (M) _M(ox)PCQSLQPEPINTPTHTK_ M(1)PCQSLQPEPINTPTHTK M(98.23)PCQSLQPEPINTPTHTK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.675 3 699.00308 2093.98741 71060.82 0.85424 0.00059712 -0.47829 -0.00033432 0.37595 0.00026279 699.337250563359 702.008617488702 43.503 0.59113 43.503 43.237 43.828 0 352 47 9 0 0 0 4.4725E-09 2 23508 98.227 98.227 1 2.329 2.6032 0 98963000 30997000 67966000 25302 1569 9561 9802 39635;39636 39635 1336 MPCQSLQPEPINTPTHTK 18 1 0 Oxidation (M) _M(ox)PCQSLQPEPINTPTHTK_ M(1)PCQSLQPEPINTPTHTK M(103.14)PCQSLQPEPINTPTHTK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1052.0074 2 1048.00098 2093.98741 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.473 1 43.473 42.973 43.973 0 0 0 0 2.7414E-10 1 23604 103.14 88.703 1 25303 1569 9561 9802 39637 39637 1336 MPCQSLQPEPINTPTHTK 18 1 0 Oxidation (M) _M(ox)PCQSLQPEPINTPTHTK_ M(1)PCQSLQPEPINTPTHTK M(45.58)PCQSLQPEPINTPTHTK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.0103 3 699.00308 2093.98741 71102.16 0.27281 0.0001907 -0.15792 -0.00011039 0.11489 8.0308E-05 699.003306194497 701.674615256648 51.848 0.97613 51.848 51.413 52.389 0 500 80 10 0 0 0 0.00010158 2 25396 45.577 45.577 1 2.6958 2.0914 0 14137000 3654200 10483000 25304 1569 9561 9802 39638;39639 39638 1336 MPCQSLQPEPINTPTHTK 18 1 0 Oxidation (M) _M(ox)PCQSLQPEPINTPTHTK_ M(1)PCQSLQPEPINTPTHTK M(42.32)PCQSLQPEPINTPTHTK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.0096 3 699.00308 2093.98741 71708.3 0.33647 0.00023519 -0.19778 -0.00013825 0.13869 9.6945E-05 699.337299366011 701.674486257541 52.247 0.84304 52.247 51.832 52.675 0 469 67 9 0 0 0 0.00016874 2 25055 42.321 42.321 1 2.8001 2.3125 0 11478000 3218800 8259100 25305 1569 9561 9802 39640;39641 39640 1336 MPCQSLQPEPINTPTHTK 18 1 0 Unmodified _MPCQSLQPEPINTPTHTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.6774 3 693.671442 2077.9925 73953.02 0.18517 0.00012845 0.12635 8.7644E-05 0.31152 0.00021609 694.005945448643 696.343141744848 63.447 0.66247 63.447 63.13 63.792 -3.8147E-06 320 57 8 0 0 0 1.0509E-05 1 32605 48.907 48.907 1 4.2022 3.2586 0 13859000 3103500 10755000 25306 1569 9561 9803 39642 39642 MPCQSLQPEPINTPTHTK 18 1 0 Unmodified _MPCQSLQPEPINTPTHTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.677 3 693.671442 2077.9925 72822.33 0.26644 0.00018482 -0.0051539 -3.5751E-06 0.26128 0.00018125 694.005790030965 696.343119052348 63.998 0.71453 63.998 63.619 64.334 0 353 60 10 0 0 0 0.0026633 2 32183 33.405 33.405 1 4.1272 3.4118 0 11815000 2458700 9355900 25307 1569 9561 9803 39643;39644 39643 MPCTEDYLSLILNR 14 0 1 Oxidation (M) _M(ox)PCTEDYLSLILNR_ M(1)PCTEDYLSLILNR M(107.06)PCTEDYLSLILNR 0 1 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 870.9185 2 870.918397 1739.82224 NaN NaN NaN -0.53526 -0.00046616 NaN NaN NaN NaN 120.75 0.41181 120.75 120.52 120.93 0 0 0 0 5.0726E-10 1 77775 107.06 89.247 1 NaN NaN 0 13541000 13541000 0 + 25308 1153 9562 9804 39645 39645 861 MPCTEDYLSLILNR 14 0 1 Oxidation (M) _M(ox)PCTEDYLSLILNR_ M(1)PCTEDYLSLILNR M(77.64)PCTEDYLSLILNR 0 1 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.9188 2 870.918397 1739.82224 NaN NaN NaN -0.8123 -0.00070745 NaN NaN NaN NaN 120.26 0.46404 120.26 120.06 120.52 -7.6294E-06 0 0 0 0.00020322 1 79319 77.64 64.287 1 NaN NaN 0 15215000 15215000 0 + 25309 1153 9562 9804 39646 39646 861 MPCTEDYLSLILNR 14 0 1 Oxidation (M) _M(ox)PCTEDYLSLILNR_ M(1)PCTEDYLSLILNR M(72.15)PCTEDYLSLILNR 0 1 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 871.4193 2 870.918397 1739.82224 NaN NaN NaN -0.10764 -9.375E-05 NaN NaN NaN NaN 132.99 0.37328 132.99 132.86 133.24 0 0 0 0 0.00040787 1 80067 72.152 56.886 1 NaN NaN 0 2421500 2421500 0 + 25310 1153 9562 9804 39647 39647 861 MPEEEDEAPVLDVR 14 0 1 Oxidation (M) _M(ox)PEEEDEAPVLDVR_ M(1)PEEEDEAPVLDVR M(55.31)PEEEDEAPVLDVR 0 1 0 Q9UKL0 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.8752 2 822.87471 1643.73487 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.872 1 70.872 70.372 71.372 0 0 0 0 0.0025244 1 42386 55.314 45.082 1 25311 2106 9563 9805 39648 39648 1936 MPGSVIPPPLVR 12 0 1 Oxidation (M) _M(ox)PGSVIPPPLVR_ M(1)PGSVIPPPLVR M(63.28)PGSVIPPPLVR 0 1 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8671 2 639.865566 1277.71658 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.335 1 87.335 86.835 87.835 0 0 0 0 0.002577 1 53814 63.283 53.33 1 25312 229 9564 9806 39649 39649 169 MPLHTIIPLLQELTK 15 1 0 Oxidation (M) _M(ox)PLHTIIPLLQELTK_ M(1)PLHTIIPLLQELTK M(41.74)PLHTIIPLLQELTK 0 1 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.3431 3 588.342702 1762.00628 79042.73 0.82308 0.00048426 -0.24254 -0.0001427 0.58054 0.00034156 588.676963892243 591.014008107717 123 1.2911 123 122.66 123.95 0 514 95 8 0 0 0 0.00090053 1 80002 41.743 41.743 1 1.3147 1.3419 0 28205000 12321000 15884000 25313 1752 9565 9807 39650 39650 1604 MPLHTIIPLLQELTK 15 1 0 Oxidation (M) _M(ox)PLHTIIPLLQELTK_ M(1)PLHTIIPLLQELTK M(46.32)PLHTIIPLLQELTK 0 1 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.015 3 588.342702 1762.00628 81375.83 0.62236 0.00036616 -0.22413 -0.00013187 0.39823 0.00023429 588.676905691229 591.013955313377 124.97 0.6566 124.97 124.74 125.4 0 134 44 7 0 0 0 0.00049269 1 81166 46.318 46.318 1 1.2061 1.2321 0 14298000 5490800 8806900 25314 1752 9565 9807 39651 39651 1604 MPLHTIIPLLQELTK 15 1 0 Oxidation (M) _M(ox)PLHTIIPLLQELTK_ M(1)PLHTIIPLLQELTK M(48.21)PLHTIIPLLQELTK 0 1 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.0143 3 588.342702 1762.00628 78689.36 0.7863 0.00046261 -0.31799 -0.00018709 0.4683 0.00027552 588.676922498377 591.014013530391 122.34 0.92822 122.34 121.81 122.74 0 349 70 9 0 0 0 0.00032364 1 80869 48.214 48.214 1 1.4061 1.5838 0 58759000 24313000 34446000 25315 1752 9565 9807 39652 39652 1604 MPLHTIIPLLQELTK 15 1 0 Oxidation (M) _M(ox)PLHTIIPLLQELTK_ M(1)PLHTIIPLLQELTK M(54.9)PLHTIIPLLQELTK 0 1 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.0146 3 588.342702 1762.00628 80900.38 0.96268 0.00056638 -0.20494 -0.00012057 0.75774 0.00044581 588.676763971692 591.013905714136 124.28 0.75451 124.28 123.96 124.72 0 101 49 5 0 0 0 0.00014165 1 82671 54.898 54.898 1 1.2862 1.2962 0 7447400 2515300 4932100 25316 1752 9565 9807 39653 39653 1604 MPLHTIIPLLQELTK 15 1 0 Unmodified _MPLHTIIPLLQELTK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.3458 3 583.011064 1746.01136 79063.18 0.68374 0.00039863 -0.21713 -0.00012659 0.46661 0.00027204 583.345338895345 585.682362478039 132.99 0.30655 132.99 132.79 133.1 0 70 12 11 0 0 0 1.351E-07 2 86952 103.72 103.72 1 0.69347 0.77156 0 60740000 36536000 24205000 25317 1752 9565 9808 39654;39655 39654 MPLHTIIPLLQELTK 15 1 0 Unmodified _MPLHTIIPLLQELTK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.683 3 583.011064 1746.01136 78801.9 0.94943 0.00055353 -0.25221 -0.00014704 0.69722 0.00040649 583.011052573526 586.016684797601 132.93 0.53152 132.93 132.52 133.05 0 143 29 11 0 0 0 0.025555 1 89085 21.458 21.458 1 0.6669 0.75063 0 70572000 42092000 28481000 25318 1752 9565 9808 39656 39656 MPLHTIIPLLQELTKR 16 1 1 Unmodified _MPLHTIIPLLQELTKR_ 0 0 1 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.2916 4 476.535395 1902.11247 85128.16 0.27264 0.00012992 -0.2941 -0.00014015 -0.021459 -1.0226E-05 476.535291008394 481.041153776184 131.45 0.51559 131.45 131.23 131.75 0 127 23 8 0 0 0 0.041209 2 79749 14.658 9.3403 1 1.3391 1.1169 0 6293700 3324000 2969600 25319 1752 9566 9809 39657;39658 39657 MPLHTIIPLLQELTKR 16 1 1 Unmodified _MPLHTIIPLLQELTKR_ 0 0 1 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.3871 3 635.044768 1902.11247 76542.48 0.92396 0.00058676 0.35277 0.00022402 1.2767 0.00081078 635.044865323022 641.052659425249 131.12 0.37451 131.12 130.88 131.26 1.5259E-05 63 17 7 0 0 0 0.057044 1 78606 11.12 11.12 1 2.2179 1.8899 0 3032100 1059700 1972400 25320 1752 9566 9809 39659 39659 MPLHTIIPLLQELTKR 16 1 1 Unmodified _MPLHTIIPLLQELTKR_ 0 0 1 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.2919 4 476.535395 1902.11247 86715.63 0.6487 0.00030913 -0.12417 -5.9171E-05 0.52453 0.00024996 476.53516708561 481.041081165525 131.12 0.56837 131.12 130.88 131.45 0 99 26 6 0 0 0 0.00037402 1 78612 44.567 44.567 1 1.3816 1.1642 0 8248700 3261400 4987300 25321 1752 9566 9809 39660 39660 MPPPTILSTVPR 12 0 1 Oxidation (M) _M(ox)PPPTILSTVPR_ M(1)PPPTILSTVPR M(66.19)PPPTILSTVPR 0 1 0 Q8NBZ0;J3KNE2;H3BNM4;Q8TET7 Q8NBZ0 Q8NBZ0 INO80E;FLJ00079 INO80 complex subunit E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8726 2 662.868305 1323.72206 75958.82 0.6339 0.00042019 0.48789 0.0003234 1.1218 0.0007436 662.868529336436 667.87263676559 82.006 0.48256 82.006 81.787 82.27 0 179 41 7 0 0 0 0.00036906 1 50077 66.19 66.19 1 1.0368 1.1292 0 29149000 15761000 13388000 25322 1921 9567 9810 39661 39661 1750 MPSESAAQSLAVALPLQTK 19 1 0 Oxidation (M) _M(ox)PSESAAQSLAVALPLQTK_ M(1)PSESAAQSLAVALPLQTK M(49.31)PSESAAQSLAVALPLQTK 0 1 0 O43660;D6RA26 O43660 O43660 PLRG1 Pleiotropic regulator 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.5158 2 979.51679 1957.01903 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.32 1 106.32 105.82 106.82 7.6294E-06 0 0 0 0.0021541 1 66017 49.31 43.586 1 25323 1386 9568 9811 39662 39662 1057 MPTKEDEEEDEPVVIK 16 2 0 Oxidation (M) _M(ox)PTKEDEEEDEPVVIK_ M(1)PTKEDEEEDEPVVIK M(65.81)PTKEDEEEDEPVVIK 0 1 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.6347 3 635.299556 1902.87684 76711.84 0.60419 0.00038384 -0.17501 -0.00011119 0.42918 0.00027266 635.299227512793 640.642616864143 40.81 0.46629 40.81 40.605 41.071 0 124 32 7 0 0 0 3.8234E-05 2 21900 65.811 65.811 1 1.1372 1.3013 0 18124000 8082300 10042000 25324 1837 9569 9812 39663;39664 39664 1693 MPVGDFFEER 10 0 1 Oxidation (M) _M(ox)PVGDFFEER_ M(1)PVGDFFEER M(64.04)PVGDFFEER 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.7772 2 621.776613 1241.53867 79296.22 0.72523 0.00045093 -0.2682 -0.00016676 0.45703 0.00028417 621.776421979838 626.78033578073 75.839 0.60717 75.839 75.513 76.12 0 166 51 6 0 0 0 0.0017169 2 44638 64.04 61.78 1 1.1769 1.1984 0 14856000 7613500 7242700 25325 1260 9570 9813 39665;39666 39665 965 MPVGDFFEER 10 0 1 Oxidation (M) _M(ox)PVGDFFEER_ M(1)PVGDFFEER M(42.34)PVGDFFEER 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.7805 2 621.776613 1241.53867 79609.02 0.53773 0.00033435 -0.52813 -0.00032838 0.0095973 5.9674E-06 621.776462545167 626.77993033718 74.659 0.64278 74.659 74.406 75.049 0 185 57 6 0 0 0 0.015095 1 44870 42.336 37.371 1 1.1864 1.1886 0 18432000 8459200 9972400 25326 1260 9570 9813 39667 39667 965 MQDTSVSFGYQLDLPK 16 1 0 Oxidation (M) _M(ox)QDTSVSFGYQLDLPK_ M(1)QDTSVSFGYQLDLPK M(95.65)QDTSVSFGYQLDLPK 0 1 0 O96008;K7EKG4 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 922.9415 2 922.940384 1843.86622 62404.14 0.70761 0.00065308 -0.48885 -0.00045118 0.21876 0.0002019 923.442238217455 926.946557449453 105.3 0.92914 105.3 105.01 105.94 0 311 67 8 0 0 0 6.8202E-07 1 66723 95.651 95.651 1 1.741 1.9482 0 84333000 31297000 53036000 25327 1433 9571 9814 39668 39668 1125 MQEGEGHSQLCLDR 14 0 1 Oxidation (M) _M(ox)QEGEGHSQLCLDR_ M(1)QEGEGHSQLCLDR M(65.18)QEGEGHSQLCLDR 0 1 0 Q8WUA4;Q53SY8;H0Y4Q6;H7C318;H7C1A9 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.3633 2 838.361778 1674.709 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.172 1 27.172 26.672 27.672 -1.9073E-06 0 0 0 0.0010226 1 12500 65.179 56.874 1 25328 1938 9572 9815 39669 39669 1775 MQEVVANLQYDDGSGMK 17 1 0 2 Oxidation (M) _M(ox)QEVVANLQYDDGSGM(ox)K_ M(1)QEVVANLQYDDGSGM(1)K M(86.5)QEVVANLQYDDGSGM(86.5)K 0 2 0 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 958.9224 2 958.921865 1915.82918 61946.29 0.34808 0.00033378 -0.38276 -0.00036704 -0.034681 -3.3256E-05 958.921667812341 962.928989432584 59.229 0.62212 59.229 58.828 59.45 0 309 48 8 0 0 0 7.2218E-06 1 33523 86.498 79.8 1 1.216 1.2384 0 28043000 13093000 14950000 25329 1770 9573 9816 39670 39670 1638;1639 MQEVVANLQYDDGSGMK 17 1 0 2 Oxidation (M) _M(ox)QEVVANLQYDDGSGM(ox)K_ M(1)QEVVANLQYDDGSGM(1)K M(87.5)QEVVANLQYDDGSGM(87.5)K 0 2 0 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 963.4315 2 958.921865 1915.82918 62077.66 0.49286 0.00047262 -0.32814 -0.00031466 0.16472 0.00015796 958.922105891467 963.430165617946 58.184 0.72991 58.184 57.875 58.605 0 223 57 7 0 0 0 1.6468E-06 4 33615 87.498 81.775 1 1.2094 1.2199 0 28214000 13956000 14258000 25330 1770 9573 9816 39671;39672;39673;39674 39671 1638;1639 MQEVVANLQYDDGSGMK 17 1 0 Oxidation (M) _MQEVVANLQYDDGSGM(ox)K_ MQEVVANLQYDDGSGM(1)K M(-52.55)QEVVANLQYDDGSGM(52.55)K 0 1 0 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 950.9255 2 950.924408 1899.83426 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.457 1 69.457 68.957 69.957 0 0 0 0 0.0018 1 41356 52.555 44.25 2 25331 1770 9573 9817 39675 39675 1638;1639 MQEVVANLQYDDGSGMKR 18 1 1 2 Oxidation (M) _M(ox)QEVVANLQYDDGSGM(ox)KR_ M(1)QEVVANLQYDDGSGM(1)KR M(94.39)QEVVANLQYDDGSGM(94.39)KR 0 2 1 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.6589 3 691.650706 2071.93029 73517.45 0.6576 0.00045483 -0.11329 -7.8358E-05 0.54431 0.00037647 691.984576965612 697.658182471548 47.231 0.42799 47.231 47.009 47.437 0 160 39 6 0 0 0 1.0167E-08 3 25606 94.387 90.667 1 1.3395 1.5077 0 22199000 8911600 13287000 25332 1770 9574 9818 39676;39677;39678 39678 1638;1639 MQGQEAVLAMSSR 13 0 1 2 Oxidation (M) _M(ox)QGQEAVLAM(ox)SSR_ M(1)QGQEAVLAM(1)SSR M(76.52)QGQEAVLAM(76.52)SSR 0 2 0 A8K6V3;Q15393;B3KQH1 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.3382 2 720.334501 1438.65445 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.349 1 29.349 28.849 29.849 0 0 0 0 0.00092242 1 14198 76.522 59.891 1 25333 764 9575 9819 39679 39679 589;590 MQGSLEAHVNGFR 13 0 1 Oxidation (M) _M(ox)QGSLEAHVNGFR_ M(1)QGSLEAHVNGFR M(100.88)QGSLEAHVNGFR 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.348 2 731.3488 1460.68305 69839.94 0.56984 0.00041675 0.09029 6.6033E-05 0.66013 0.00048279 731.348303166786 736.353201602584 41.97 0.44488 41.97 41.695 42.14 0 66 33 4 0 0 0 4.5337E-06 2 22145 100.88 100.88 1 0.58459 0.59248 0 18079000 11678000 6400500 25334 2148 9576 9820 39680;39681 39681 1994 MQHLIAR 7 0 1 Oxidation (M) _M(ox)QHLIAR_ M(1)QHLIAR M(58.17)QHLIAR 0 1 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;Q8WUW7;Q504U3;H3BR70 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.7458 2 442.742179 883.469806 NaN NaN NaN -0.93054 -0.00041199 NaN NaN NaN NaN 18.606 0.25604 18.606 18.539 18.795 0 0 0 0 0.015672 1 5559 58.167 35.238 1 NaN NaN 0 14538000 0 14538000 25335 1481 9577 9821 39682 39682 1239 MQHNLEQQIQAR 12 0 1 Oxidation (M) _M(ox)QHNLEQQIQAR_ M(1)QHNLEQQIQAR M(51.09)QHNLEQQIQAR 0 1 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.3731 2 756.372806 1510.73106 70137.64 0.3475 0.00026284 -0.37295 -0.00028209 -0.025451 -1.925E-05 756.372845477401 761.376723390478 27 0.25529 27 26.863 27.119 0 53 14 8 0 0 0 0.002607 1 12321 51.092 45.311 1 1.4994 1.5095 0 7821500 3664300 4157200 25336 523 9578 9822 39683 39683 387 MQHNLEQQIQAR 12 0 1 Oxidation (M) _M(ox)QHNLEQQIQAR_ M(1)QHNLEQQIQAR M(88.19)QHNLEQQIQAR 0 1 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.9203 3 504.584296 1510.73106 86267.88 0.22256 0.0001123 -0.24916 -0.00012572 -0.026602 -1.3423E-05 504.918450719114 507.920248592439 26.366 0.27207 26.366 26.252 26.524 -1.9073E-06 72 16 7 0 0 0 5.8216E-05 1 11793 88.187 80.816 1 1.7795 1.7473 0 14121000 6580900 7540100 25337 523 9578 9822 39684 39684 387 MQIFVK 6 1 0 Oxidation (M) _M(ox)QIFVK_ M(1)QIFVK M(58.66)QIFVK 0 1 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;J3QSA3;F5GZ39;A8CGI2 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 391.2178 2 391.217475 780.420396 NaN NaN NaN 0.53148 0.00020793 NaN NaN NaN NaN 37.313 0.74777 37.313 37.015 37.762 0 0 0 0 0.023031 1 18846 58.661 10.419 1 NaN NaN 0 171550000 171550000 0 25338 891 9579 9823 39685 39685 700 MQIFVK 6 1 0 Oxidation (M) _M(ox)QIFVK_ M(1)QIFVK M(81.72)QIFVK 0 1 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;J3QSA3;F5GZ39;A8CGI2 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 391.2175 2 391.217475 780.420396 95336.53 0.65268 0.00025534 -0.37613 -0.00014715 0.27655 0.00010819 391.217415575571 395.224785503154 35.868 0.9044 35.868 35.275 36.18 0 422 79 8 0 0 0 0.02853 1 18230 81.716 9.0961 1 1.6785 1.9653 0 307190000 126780000 180410000 25339 891 9579 9823 39686 39686 700 MQIFVK 6 1 0 Oxidation (M) _M(ox)QIFVK_ M(1)QIFVK M(59.61)QIFVK 0 1 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;J3QSA3;F5GZ39;A8CGI2 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.911 1 781.427673 780.420396 68814.73 0.87182 0.00068126 0.33768 0.00026388 1.2095 0.00094514 781.427913490374 789.442268373351 36.343 0.2792 36.343 36.092 36.371 0 93 23 6 0 0 0 0.019275 1 18557 59.609 16.891 1 1.8094 1.9686 0 39615000 13575000 26040000 25340 891 9579 9823 39687 39687 700 MQIFVK 6 1 0 Oxidation (M) _M(ox)QIFVK_ M(1)QIFVK M(74.83)QIFVK 0 1 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;J3QSA3;F5GZ39;A8CGI2 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 391.2177 2 391.217475 780.420396 95513.84 0.15262 5.9707E-05 0.045082 1.7637E-05 0.1977 7.7344E-05 391.21749937738 395.224542116439 41.822 0.926 41.822 41.482 42.408 0 326 73 9 0 0 0 0.024236 1 19442 74.832 10.269 1 0.64915 0.53005 0 33290000 19635000 13655000 25341 891 9579 9823 39688 39688 700 MQIFVK 6 1 0 Oxidation (M) _M(ox)QIFVK_ M(1)QIFVK M(42.72)QIFVK 0 1 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;J3QSA3;F5GZ39;A8CGI2 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 391.2176 2 391.217475 780.420396 96062.34 -0.16185 -6.332E-05 0.56793 0.00022218 0.40607 0.00015886 391.217557631584 395.22474522361 41.111 0.79522 41.111 40.638 41.434 -3.8147E-06 284 64 5 0 0 0 0.063242 1 18476 42.719 8.0136 1 0.73557 0.59096 0 15966000 9136700 6829300 25342 891 9579 9823 39689 39689 700 MQIFVK 6 1 0 Oxidation (M) _M(ox)QIFVK_ M(1)QIFVK M(47.05)QIFVK 0 1 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;J3QSA3;F5GZ39;A8CGI2 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 391.2174 2 391.217475 780.420396 95661.59 -0.19363 -7.5753E-05 0.44687 0.00017482 0.25324 9.9071E-05 391.217571603575 395.224664778729 41.768 0.99512 41.768 41.418 42.413 3.8147E-06 335 76 8 0 0 0 0.055792 1 18928 47.045 8.6744 1 0.66222 0.54218 0 26914000 16951000 9963600 25343 891 9579 9823 39690 39690 700 MQIFVK 6 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)QIFVK_ M(1)QIFVK M(46.35)QIFVK 1 1 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;J3QSA3;F5GZ39;A8CGI2 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.3947 1 823.438237 822.430961 67095.05 0.61252 0.00050438 0.09711 7.9964E-05 0.70963 0.00058434 823.437742165122 831.452585437898 78.48 1.0682 78.48 78.001 79.07 0 251 93 4 0 0 0 0.031277 1 46673 46.351 35.432 1 2.0253 2.0279 0 18751000 5540000 13211000 25344 891 9579 9824 39691 39691 700 MQIFVK 6 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)QIFVK_ M(1)QIFVK M(56.51)QIFVK 1 1 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;J3QSA3;F5GZ39;A8CGI2 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.059 1 823.438237 822.430961 67305.35 0.84835 0.00069857 0.20131 0.00016577 1.0497 0.00086434 823.437990874749 831.452558351326 77.472 1.1885 77.472 76.968 78.157 0 228 99 4 0 0 0 0.026552 1 47074 56.51 45.592 1 1.9658 2.1342 0 22283000 7568300 14715000 25345 891 9579 9824 39692 39692 700 MQLLEIITTEK 11 1 0 Oxidation (M) _M(ox)QLLEIITTEK_ M(1)QLLEIITTEK M(42.34)QLLEIITTEK 0 1 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.873 2 667.865428 1333.7163 NaN NaN NaN 1.1526 0.00076978 NaN NaN NaN NaN 97.473 0.71506 97.473 97.075 97.79 0 0 0 0 0.017959 1 60711 42.336 31.506 1 NaN NaN 0 17435000 0 17435000 25346 1228 9580 9825 39693 39693 944 MQLSAELQSDTEEILSK 17 1 0 Oxidation (M) _M(ox)QLSAELQSDTEEILSK_ M(1)QLSAELQSDTEEILSK M(140.82)QLSAELQSDTEEILSK 0 1 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 969.9738 2 969.472245 1936.92994 61307.11 0.294 0.00028502 0.11682 0.00011326 0.41082 0.00039828 969.97436237534 973.479398454911 105.89 0.5825 105.89 105.63 106.21 0 195 43 7 0 0 0 2.1984E-25 2 65673 140.82 119.52 1 1.4847 1.5979 0 33235000 11249000 21986000 25347 1411 9581 9826 39694;39695 39695 1097 MQLSAELQSDTEEILSK 17 1 0 Oxidation (M) _M(ox)QLSAELQSDTEEILSK_ M(1)QLSAELQSDTEEILSK M(131.53)QLSAELQSDTEEILSK 0 1 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 969.473 2 969.472245 1936.92994 61354.61 0.49276 0.00047771 -0.042404 -4.111E-05 0.45035 0.0004366 969.974017907129 973.980794281519 105.3 0.6648 105.3 105.05 105.72 0 158 47 6 0 0 0 2.1199E-18 1 66813 131.53 102.77 1 1.4893 1.5452 0 33433000 14882000 18551000 25348 1411 9581 9826 39696 39696 1097 MQLSAELQSDTEEILSK 17 1 0 Oxidation (M) _M(ox)QLSAELQSDTEEILSK_ M(1)QLSAELQSDTEEILSK M(43.32)QLSAELQSDTEEILSK 0 1 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 969.9744 2 969.472245 1936.92994 60244.77 0.2534 0.00024566 0.5201 0.00050422 0.7735 0.00074988 969.472662667797 973.479869608189 117.97 0.43515 117.97 117.72 118.16 7.6294E-06 70 18 8 0 0 0 0.00052646 1 69544 43.316 35.772 1 0.74256 0.58557 0 10839000 6127400 4711100 25349 1411 9581 9826 39697 39697 1097 MQNDAGEFVDLYVPR 15 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)QNDAGEFVDLYVPR_ M(1)QNDAGEFVDLYVPR M(94.12)QNDAGEFVDLYVPR 1 1 0 Q8WVC2;Q6FGH5;P63220;Q9BYK1;Q9BYK2;Q13666 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 911.4225 2 906.417076 1810.8196 64689.68 0.90609 0.00082129 -0.51786 -0.0004694 0.38823 0.00035189 906.918843886993 911.420310825803 120.71 0.59959 120.71 120.47 121.07 -7.6294E-06 171 40 6 0 0 0 5.4378E-06 1 79974 94.122 86.859 1 1.3571 1.3498 0 16304000 6825600 9478000 25350 1655 9582 9827 39698 39698 1434 MQNTDDEERPQLSDDER 17 0 2 Oxidation (M) _M(ox)QNTDDEERPQLSDDER_ M(1)QNTDDEERPQLSDDER M(83.97)QNTDDEERPQLSDDER 0 1 1 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.634 3 698.627395 2092.86035 72569.34 0.28367 0.00019818 0.14557 0.0001017 0.42925 0.00029988 698.961821927406 705.300123898946 24.718 0.23703 24.718 24.594 24.831 0 37 10 6 0 0 0 4.6936E-06 1 10422 83.966 83.966 1 2.6184 2.8998 0 10856000 3277400 7579000 25351 1012 9583 9828 39699 39699 801 MQNTDDEERPQLSDDER 17 0 2 Oxidation (M) _M(ox)QNTDDEERPQLSDDER_ M(1)QNTDDEERPQLSDDER M(64.45)QNTDDEERPQLSDDER 0 1 1 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.2998 3 698.627395 2092.86035 73238.56 0.61045 0.00042648 -0.62461 -0.00043637 -0.014157 -9.8908E-06 698.961100221029 705.633833470223 24.592 0.27727 24.592 24.439 24.716 0 53 13 8 0 0 0 1.9229E-05 2 10280 64.454 64.454 1 2.1195 2.2003 0 12925000 4892700 8032500 25352 1012 9583 9828 39700;39701 39700 801 MQQENMKPQEQLTLEPYER 19 1 1 2 Oxidation (M) _M(ox)QQENM(ox)KPQEQLTLEPYER_ M(1)QQENM(1)KPQEQLTLEPYER M(78.01)QQENM(78.01)KPQEQLTLEPYER 0 2 1 Q96BS4;P22087;M0QXL5;M0R299 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.0513 3 808.710513 2423.10971 66352.87 0.414 0.0003348 -0.43516 -0.00035192 -0.021164 -1.7116E-05 809.044876134152 815.052354734705 58.497 0.93963 58.497 58.079 59.018 3.8147E-06 707 76 14 0 0 0 2.5187E-06 1 33015 78.012 78.012 1 1.2603 1.5278 0 287900000 124430000 163470000 25353 1506 9584 9829 39702 39702 1273;1274 MQQENMKPQEQLTLEPYER 19 1 1 2 Oxidation (M) _M(ox)QQENM(ox)KPQEQLTLEPYER_ M(1)QQENM(1)KPQEQLTLEPYER M(92.31)QQENM(92.31)KPQEQLTLEPYER 0 2 1 Q96BS4;P22087;M0QXL5;M0R299 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.053 3 808.710513 2423.10971 66355.34 0.45328 0.00036658 -0.28412 -0.00022977 0.16916 0.0001368 809.045015574999 814.718148303658 57.314 1.0734 57.314 56.802 57.875 0 716 83 13 0 0 0 1.4887E-08 3 32909 92.31 91.043 1 1.2168 1.444 0 301600000 136660000 164940000 25354 1506 9584 9829 39703;39704;39705 39704 1273;1274 MQQENMKPQEQLTLEPYER 19 1 1 2 Oxidation (M) _M(ox)QQENM(ox)KPQEQLTLEPYER_ M(1)QQENM(1)KPQEQLTLEPYER M(49.34)QQENM(49.34)KPQEQLTLEPYER 0 2 1 Q96BS4;P22087;M0QXL5;M0R299 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 808.7101 3 808.710513 2423.10971 66856.15 0.49701 0.00040193 -0.16213 -0.00013112 0.33487 0.00027082 809.045020420378 814.718140260512 68.65 0.90574 68.65 68.199 69.105 0 612 67 13 0 0 0 1.9573E-05 1 35707 49.34 49.34 1 0.42639 0.37731 0 46038000 31862000 14176000 25355 1506 9584 9829 39706 39706 1273;1274 MQQENMKPQEQLTLEPYER 19 1 1 Oxidation (M) _MQQENM(ox)KPQEQLTLEPYER_ MQQENM(1)KPQEQLTLEPYER M(-33.73)QQENM(33.73)KPQEQLTLEPYER 0 1 1 Q96BS4;P22087;M0QXL5;M0R299 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.7144 3 803.378875 2407.1148 NaN NaN NaN 0.17001 0.00013659 NaN NaN NaN NaN 61.056 0.36981 61.056 60.808 61.178 -3.8147E-06 0 0 0 0.00014492 2 35720 57.798 53.599 2 NaN NaN 0 8170600 8170600 0 25356 1506 9584 9830 39707;39708 39707 1273;1274 MQQENMKPQEQLTLEPYER 19 1 1 Oxidation (M) _M(ox)QQENMKPQEQLTLEPYER_ M(0.991)QQENM(0.009)KPQEQLTLEPYER M(20.59)QQENM(-20.59)KPQEQLTLEPYER 0 1 1 Q96BS4;P22087;M0QXL5;M0R299 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.3874 3 803.378875 2407.1148 66034.55 0.57396 0.00046111 -0.105 -8.4354E-05 0.46896 0.00037675 803.713535920759 809.386276432126 78.86 0.64285 78.86 78.604 79.247 -7.6294E-06 193 37 8 0 0 0 1.0182E-05 1 42353 50.358 50.358 2 0.92961 0.78113 0 7078600 3648500 3430100 25357 1506 9584 9830 39709 39709 1273;1274 MQQENMKPQEQLTLEPYER 19 1 1 Oxidation (M) _MQQENM(ox)KPQEQLTLEPYER_ M(0.001)QQENM(0.999)KPQEQLTLEPYER M(-28.92)QQENM(28.92)KPQEQLTLEPYER 0 1 1 Q96BS4;P22087;M0QXL5;M0R299 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 809.7221 3 803.378875 2407.1148 67020.43 0.34072 0.00027372 -0.0092276 -7.4133E-06 0.33149 0.00026631 803.713213185477 809.720920742302 72.664 0.58685 72.664 72.424 73.011 0 359 49 10 0 0 0 9.5229E-06 1 37508 51.819 51.819 2 0.83596 0.7075 0 12061000 7087000 4974100 25358 1506 9584 9830 39710 39710 1273;1274 MQQENMKPQEQLTLEPYER 19 1 1 Unmodified _MQQENMKPQEQLTLEPYER_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.0559 3 798.047237 2391.11988 67359.8 0.50362 0.00040191 -0.36565 -0.00029181 0.13797 0.00011011 798.04702195583 804.055028358028 83.163 0.37935 83.163 82.99 83.369 0 105 20 7 0 0 0 0.0031868 1 45381 29.766 29.766 1 1.233 1.0111 0 4630900 1690200 2940700 25359 1506 9584 9831 39711 39711 MQQENMKPQEQLTLEPYER 19 1 1 Unmodified _MQQENMKPQEQLTLEPYER_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 804.0542 3 798.047237 2391.11988 68391.85 0.59023 0.00047103 -0.36239 -0.00028921 0.22784 0.00018183 798.715313041532 804.38878928634 83.307 0.39731 83.307 83.089 83.486 0 82 21 6 0 0 0 0.0050367 1 44503 25.186 25.186 1 1.5323 1.3074 0 2941700 840850 2100800 25360 1506 9584 9831 39712 39712 MQQLNAAHQEALMK 14 1 0 2 Oxidation (M) _M(ox)QQLNAAHQEALM(ox)K_ M(1)QQLNAAHQEALM(1)K M(78.69)QQLNAAHQEALM(78.69)K 0 2 0 A0A024R8Y0;Q9BZD4;E9PQC4;B1AQT4;E9PP32 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.9019 2 822.895257 1643.77596 66759.39 0.4983 0.00041005 0.079515 6.5432E-05 0.57782 0.00047548 822.895823865687 826.90254982572 23.774 0.18316 23.774 23.666 23.849 0 38 8 7 0 0 0 0.00016558 2 9601 78.692 78.692 1 1.4327 1.4739 0 10738000 3991400 6746300 25361 264 9585 9832 39713;39714 39714 202;203 MQQLNAAHQEALMK 14 1 0 2 Oxidation (M) _M(ox)QQLNAAHQEALM(ox)K_ M(1)QQLNAAHQEALM(1)K M(125.82)QQLNAAHQEALM(125.82)K 0 2 0 A0A024R8Y0;Q9BZD4;E9PQC4;B1AQT4;E9PP32 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.9014 2 822.895257 1643.77596 68423.54 0.6935 0.00057068 0.22365 0.00018404 0.91715 0.00075472 822.895518921933 826.903003533868 23.474 0.16805 23.474 23.402 23.57 0 35 7 6 0 0 0 4.4981E-14 3 9339 125.82 119.59 1 1.4758 1.4738 0 6572800 2416000 4156800 25362 264 9585 9832 39715;39716;39717 39716 202;203 MQQNIQELEEQLEEEESAR 19 0 1 Oxidation (M) _M(ox)QQNIQELEEQLEEEESAR_ M(1)QQNIQELEEQLEEEESAR M(75.76)QQNIQELEEQLEEEESAR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1180.0322 2 1175.02918 2348.0438 55988.86 -0.06526 -7.6682E-05 0.072237 8.4881E-05 0.0069777 8.1991E-06 1175.53049366942 1180.53506530068 102.78 0.7084 102.78 102.46 103.17 0 466 60 10 0 0 0 3.9961E-06 2 63123 75.764 75.764 1 1.8986 2.1142 0 80235000 28141000 52095000 25363 81 9586 9833 39718;39719 39718 67 MQQNIQELEEQLEEEESAR 19 0 1 Oxidation (M) _M(ox)QQNIQELEEQLEEEESAR_ M(1)QQNIQELEEQLEEEESAR M(101.62)QQNIQELEEQLEEEESAR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1180.5339 2 1175.02918 2348.0438 56086.63 0.23018 0.00027047 -0.24261 -0.00028507 -0.012427 -1.4602E-05 1175.53011725197 1180.53467080819 102.18 0.68461 102.18 101.9 102.58 7.6294E-06 384 51 10 0 0 0 3.716E-12 3 64253 101.62 101.62 1 1.9478 2.2329 0 82573000 25240000 57332000 25364 81 9586 9833 39720;39721;39722 39720 67 MQQNIQELEEQLEEEESAR 19 0 1 Oxidation (M) _M(ox)QQNIQELEEQLEEEESAR_ M(1)QQNIQELEEQLEEEESAR M(115.82)QQNIQELEEQLEEEESAR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1180.0323 2 1175.02918 2348.0438 55438.98 0.33235 0.00039052 0.10717 0.00012592 0.43951 0.00051644 1175.02915535507 1180.535148601 115.29 0.63087 115.29 115.1 115.73 -7.6294E-06 199 29 11 0 0 0 5.9862E-17 1 67482 115.82 115.82 1 1.8741 1.5318 0 15948000 5460300 10487000 25365 81 9586 9833 39723 39723 67 MQQNIQELEEQLEEEESAR 19 0 1 Oxidation (M) _M(ox)QQNIQELEEQLEEEESAR_ M(1)QQNIQELEEQLEEEESAR M(56.79)QQNIQELEEQLEEEESAR 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1180.0342 2 1175.02918 2348.0438 55935.68 0.26524 0.00031167 0.061379 7.2122E-05 0.32662 0.00038379 1175.5306498487 1180.03364783884 115.24 0.74836 115.24 115.05 115.8 0 201 35 8 0 0 0 1.4059E-05 1 66523 56.793 56.793 1 1.9322 1.5635 0 11671000 3855300 7815500 25366 81 9586 9833 39724 39724 67 MQQNIQELEEQLEEEESAR 19 0 1 Unmodified _MQQNIQELEEQLEEEESAR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1172.5381 2 1167.03172 2332.04888 NaN NaN NaN 0.67048 0.00078248 NaN NaN NaN NaN 107.05 0.18327 107.05 106.98 107.16 0 0 0 0 0.00080975 2 68277 53.754 45.843 1 NaN NaN 0 3733200 0 3733200 25367 81 9586 9834 39725;39726 39725 MQQNIQELEEQLEEEESAR 19 0 1 Unmodified _MQQNIQELEEQLEEEESAR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1172.5371 2 1167.03172 2332.04888 56723.43 0.30804 0.00035949 0.3997 0.00046646 0.70773 0.00082595 1168.03504632473 1172.03637837731 119.34 0.48831 119.34 119.16 119.65 0 80 19 8 0 0 0 0.04139 1 70576 21.886 21.886 1 2.7174 2.3363 0 6692700 1696000 4996700 25368 81 9586 9834 39727 39727 MQQPQISVYSGSDR 14 0 1 Oxidation (M) _M(ox)QQPQISVYSGSDR_ M(1)QQPQISVYSGSDR M(76.93)QQPQISVYSGSDR 0 1 0 A5YM43;Q8NDX5;E7EX82;B4E2T1;F8WDA4;G5E9U7;C9J6H0;B4DTC4;C9JAU4;C9JYH7;B4DYD1 A5YM43 A5YM43 PHC3 Polyhomeotic-like protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.3801 2 806.375211 1610.73587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.657 1 49.657 49.157 50.157 3.8147E-06 0 0 0 0.00047833 1 27334 76.927 65.196 1 25369 677 9587 9835 39728 39728 525 MQQQLDEYQELLDIK 15 1 0 Oxidation (M) _M(ox)QQQLDEYQELLDIK_ M(1)QQQLDEYQELLDIK M(112.43)QQQLDEYQELLDIK 0 1 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.9687 2 955.464223 1908.91389 61500.85 0.49045 0.0004686 -0.044049 -4.2087E-05 0.4464 0.00042652 955.965827082754 959.471432408053 109.86 0.73627 109.86 109.46 110.2 0 340 54 10 0 0 0 6.2985E-09 1 68737 112.43 102.64 1 1.7766 2.0158 0 159490000 60112000 99382000 25370 1440 9588 9836 39729 39729 1138 MQQQLDEYQELLDIK 15 1 0 Oxidation (M) _M(ox)QQQLDEYQELLDIK_ M(1)QQQLDEYQELLDIK M(187.44)QQQLDEYQELLDIK 0 1 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.4711 2 955.464223 1908.91389 62766.25 0.5369 0.00051299 -0.26878 -0.00025681 0.26812 0.00025618 955.965695611551 959.47133228284 109.31 0.5765 109.31 109.07 109.64 0 279 39 11 0 0 0 1.2705E-48 1 70020 187.44 172.88 1 1.6805 1.9386 0 187580000 65825000 121750000 25371 1440 9588 9836 39730 39730 1138 MQQQLDEYQELLDIK 15 1 0 Oxidation (M) _M(ox)QQQLDEYQELLDIK_ M(1)QQQLDEYQELLDIK M(92.3)QQQLDEYQELLDIK 0 1 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 955.4648 2 955.464223 1908.91389 62611.91 0.5463 0.00052197 -0.15006 -0.00014338 0.39624 0.00037859 955.464074633619 959.972720646732 121.34 0.84282 121.34 121.08 121.93 0 189 41 11 0 0 0 5.295E-06 1 72127 92.295 86.575 1 1.0624 0.86669 0 32596000 14918000 17678000 25372 1440 9588 9836 39731 39731 1138 MQQQLDEYQELLDIK 15 1 0 Oxidation (M) _M(ox)QQQLDEYQELLDIK_ M(1)QQQLDEYQELLDIK M(92.19)QQQLDEYQELLDIK 0 1 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 959.4713 2 955.464223 1908.91389 62667.13 0.47955 0.0004582 -0.22528 -0.00021525 0.25427 0.00024295 955.965740230686 959.471318944334 121.18 0.67946 121.18 120.95 121.62 0 201 34 9 0 0 0 5.3629E-06 2 71151 92.19 83.815 1 1.1488 0.93492 0 25365000 12522000 12843000 25373 1440 9588 9836 39732;39733 39733 1138 MQQQLDEYQELLDIK 15 1 0 Unmodified _MQQQLDEYQELLDIK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 947.9695 2 947.466766 1892.91898 61782.61 0.70606 0.00066897 -0.42727 -0.00040483 0.27878 0.00026414 947.968333065894 951.473382320511 124.14 0.64339 124.14 123.9 124.55 0 165 26 9 0 0 0 9.9787E-06 3 74385 93.011 84.611 1 1.4841 1.1513 0 14144000 5834800 8309000 25374 1440 9588 9837 39734;39735;39736 39736 MQQQLDEYQELLDIK 15 1 0 Unmodified _MQQQLDEYQELLDIK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 947.9695 2 947.466766 1892.91898 62177.14 0.62877 0.00059574 -0.28512 -0.00027014 0.34365 0.0003256 947.968355296529 951.473489475089 124.02 0.65829 124.02 123.78 124.44 0 159 25 10 0 0 0 1.4907E-05 2 73282 89.301 82.171 1 1.3639 1.0939 0 18940000 8355000 10585000 25375 1440 9588 9837 39737;39738 39738 MREDYDSVEQDGDEPGPQR 19 0 2 Oxidation (M) _M(ox)REDYDSVEQDGDEPGPQR_ M(1)REDYDSVEQDGDEPGPQR M(56.71)REDYDSVEQDGDEPGPQR 0 1 1 A0A023T787;Q9Y5S9 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.3128 3 746.978316 2237.91312 71082.37 0.66685 0.00049812 -0.20484 -0.00015301 0.46201 0.00034511 747.312753332273 753.650625263577 30.962 0.28922 30.962 30.789 31.079 0 120 25 8 0 0 0 7.3165E-06 1 15182 56.708 53.214 1 2.1469 2.315 0 16782000 5062200 11720000 25376 4 9589 9838 39739 39739 1 MREDYDSVEQDGDEPGPQR 19 0 2 Oxidation (M) _M(ox)REDYDSVEQDGDEPGPQR_ M(1)REDYDSVEQDGDEPGPQR M(78.92)REDYDSVEQDGDEPGPQR 0 1 1 A0A023T787;Q9Y5S9 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3129 3 746.978316 2237.91312 70911.68 0.30161 0.00022529 -0.077948 -5.8226E-05 0.22366 0.00016707 747.312353817949 753.984811760752 30.156 0.39648 30.156 29.985 30.382 1.9073E-06 148 32 7 0 0 0 1.5139E-06 3 14719 78.917 78.18 1 1.9111 2.0827 0 18506000 4741000 13765000 25377 4 9589 9838 39740;39741;39742 39742 1 MRIESLSSQLSNLQK 15 1 1 Oxidation (M) _M(ox)RIESLSSQLSNLQK_ M(1)RIESLSSQLSNLQK M(46.32)RIESLSSQLSNLQK 0 1 1 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.9841 3 583.976971 1748.90908 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.808 1 69.808 69.308 70.308 0 0 0 0 0.0020421 1 40595 46.323 40.608 1 25378 1502 9590 9839 39743 39743 1261 MRIESLSSQLSNLQK 15 1 1 Oxidation (M) _M(ox)RIESLSSQLSNLQK_ M(1)RIESLSSQLSNLQK M(44.73)RIESLSSQLSNLQK 0 1 1 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3115 3 583.976971 1748.90908 78927.95 0.60442 0.00035297 0.0077696 4.5372E-06 0.61219 0.00035751 583.976894169572 589.984579041841 68.056 0.6432 68.056 67.749 68.392 -7.6294E-06 221 52 6 0 0 0 0.0028644 1 40306 44.734 40.034 1 1.5733 1.8071 0 25120000 12346000 12774000 25379 1502 9590 9839 39744 39744 1261 MRPGVACSVSQAQK 14 1 1 Oxidation (M) _M(ox)RPGVACSVSQAQK_ M(1)RPGVACSVSQAQK M(74.61)RPGVACSVSQAQK 0 1 1 Q53Z07;P32969;E7ESE0;H0Y9V9 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.8897 2 767.876867 1533.73918 67043.84 0.66245 0.00050868 -0.23456 -0.00018011 0.42789 0.00032856 767.877109517043 776.88812356579 19.712 0.48428 19.712 19.41 19.894 0 231 33 9 0 0 0 0.0001382 2 6132 74.611 74.611 1 1.029 1.2391 0 102340000 50684000 51654000 25380 1537 9591 9840 39745;39746 39746 1297 MRPGVACSVSQAQK 14 1 1 Oxidation (M) _M(ox)RPGVACSVSQAQK_ M(1)RPGVACSVSQAQK M(114.7)RPGVACSVSQAQK 0 1 1 Q53Z07;P32969;E7ESE0;H0Y9V9 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2542 3 512.25367 1533.73918 80919.59 0.43432 0.00022248 0.014308 7.3291E-06 0.44863 0.00022981 512.253888117167 518.261336693831 19.727 0.5101 19.727 19.422 19.933 1.9073E-06 212 33 8 0 0 0 7.2994E-10 2 6147 114.7 104.92 1 1.0261 1.2325 0 70211000 32957000 37254000 25381 1537 9591 9840 39747;39748 39748 1297 MRPGVACSVSQAQK 14 1 1 Oxidation (M) _M(ox)RPGVACSVSQAQK_ M(1)RPGVACSVSQAQK M(133.07)RPGVACSVSQAQK 0 1 1 Q53Z07;P32969;E7ESE0;H0Y9V9 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.8776 2 767.876867 1533.73918 67985.63 0.24417 0.00018749 -0.15267 -0.00011723 0.0915 7.0261E-05 767.877143297044 776.888340569408 19.35 0.52459 19.35 19.164 19.689 0 140 22 10 0 0 0 1.2829E-14 2 5748 133.07 133.07 1 1.0392 1.2293 0 181660000 88270000 93393000 25382 1537 9591 9840 39749;39750 39750 1297 MRPGVACSVSQAQK 14 1 1 Oxidation (M) _M(ox)RPGVACSVSQAQK_ M(1)RPGVACSVSQAQK M(108.97)RPGVACSVSQAQK 0 1 1 Q53Z07;P32969;E7ESE0;H0Y9V9 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.2537 3 512.25367 1533.73918 81612.87 0.067014 3.4328E-05 -0.3259 -0.00016694 -0.25889 -0.00013262 512.253960498383 518.261138655392 19.383 0.62122 19.383 19.164 19.785 0 152 26 10 0 0 0 3.1602E-07 2 5764 108.97 97.735 1 0.92859 1.0998 0 221510000 105550000 115960000 25383 1537 9591 9840 39751;39752 39752 1297 MRPGVACSVSQAQK 14 1 1 Oxidation (M) _M(ox)RPGVACSVSQAQK_ M(1)RPGVACSVSQAQK M(54.09)RPGVACSVSQAQK 0 1 1 Q53Z07;P32969;E7ESE0;H0Y9V9 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.2612 3 512.25367 1533.73918 80800.67 -0.10499 -5.3779E-05 0.58805 0.00030123 0.48307 0.00024745 512.254483160159 518.261364605665 20.796 0.65339 20.796 20.573 21.226 0 167 33 8 0 0 0 0.00034658 2 5570 54.09 42.114 1 0.71815 0.60179 0 6053200 3393400 2659800 25384 1537 9591 9840 39753;39754 39754 1297 MRPGVACSVSQAQK 14 1 1 Unmodified _MRPGVACSVSQAQK_ 0 0 1 Q53Z07;P32969;E7ESE0;H0Y9V9 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.3911 2 759.87941 1517.74427 71213.42 0.31047 0.00023592 0.67188 0.00051055 0.98235 0.00074647 759.879525388929 768.891376883342 23.57 0.20074 23.57 23.507 23.707 0 30 8 6 0 0 0 0.039378 1 9446 40.616 23.702 1 0.59603 0.64633 0 10099000 5582800 4516500 25385 1537 9591 9841 39755 39755 MRPGVACSVSQAQK 14 1 1 Unmodified _MRPGVACSVSQAQK_ 0 0 1 Q53Z07;P32969;E7ESE0;H0Y9V9 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 512.9301 3 506.922032 1517.74427 82961.54 0.20752 0.0001052 -0.033257 -1.6859E-05 0.17427 8.834E-05 506.922062121044 512.929779674257 26.072 0.43606 26.072 25.827 26.263 0 88 17 8 0 0 0 1.0214E-09 2 9719 99.991 99.991 1 1.0833 0.90362 0 6308600 3145400 3163200 25386 1537 9591 9841 39756;39757 39756 MRPGVACSVSQAQK 14 1 1 Unmodified _MRPGVACSVSQAQK_ 0 0 1 Q53Z07;P32969;E7ESE0;H0Y9V9 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.9215 3 506.922032 1517.74427 82474.88 0.28028 0.00014208 -1.263 -0.00064022 -0.98268 -0.00049814 506.921313943506 512.92953590257 26.052 0.39643 26.052 25.884 26.28 1.9073E-06 94 16 9 0 0 0 0.00085037 2 9207 50.806 43.436 1 1.2136 1.0221 0 4151800 1927600 2224200 25387 1537 9591 9841 39758;39759 39758 MRPLTEEETR 10 0 2 Oxidation (M) _M(ox)RPLTEEETR_ M(1)RPLTEEETR M(123.11)RPLTEEETR 0 1 1 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.3114 2 639.311351 1276.60815 73626.36 0.65103 0.00041621 -0.41774 -0.00026706 0.23329 0.00014915 639.310964667377 649.319379823859 18.46 0.28983 18.46 18.332 18.622 0 50 10 9 0 0 0 1.1784E-08 2 5388 123.11 123.11 1 1.3287 1.451 0 205410000 89385000 116030000 25388 2119 9592 9842 39760;39761 39761 1942 MRPLTEEETR 10 0 2 Oxidation (M) _M(ox)RPLTEEETR_ M(1)RPLTEEETR M(41.11)RPLTEEETR 0 1 1 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.5434 3 426.543326 1276.60815 90391.92 -0.047415 -2.0224E-05 0.04517 1.9267E-05 -0.0022449 -9.5755E-07 426.543319098569 433.21543327932 18.46 0.24057 18.46 18.332 18.572 0 34 8 7 0 0 0 0.008579 1 5423 41.109 41.109 1 1.303 1.4184 0 72091000 30951000 41140000 25389 2119 9592 9842 39762 39762 1942 MRPLTEEETR 10 0 2 Oxidation (M) _M(ox)RPLTEEETR_ M(1)RPLTEEETR M(94.62)RPLTEEETR 0 1 1 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.2156 3 426.543326 1276.60815 91096.59 -0.21584 -9.2067E-05 -0.0026925 -1.1485E-06 -0.21854 -9.3216E-05 426.543321930129 433.215540549111 18.368 0.24614 18.368 18.264 18.51 0 24 6 7 0 0 0 4.596E-05 2 5091 94.616 85.184 1 1.3234 1.5289 0 68810000 29809000 39001000 25390 2119 9592 9842 39763;39764 39763 1942 MRPLTEEETR 10 0 2 Oxidation (M) _M(ox)RPLTEEETR_ M(1)RPLTEEETR M(73.07)RPLTEEETR 0 1 1 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.3115 2 639.311351 1276.60815 74563.63 0.49176 0.00031439 -0.35863 -0.00022928 0.13312 8.5108E-05 639.311128879082 649.319399252665 18.368 0.35238 18.368 18.264 18.617 0 47 11 9 0 0 0 0.0013284 2 5107 73.067 73.067 1 1.2265 1.4509 0 172630000 75016000 97612000 25391 2119 9592 9842 39765;39766 39766 1942 MRPLTEEETR 10 0 2 Oxidation (M) _M(ox)RPLTEEETR_ M(1)RPLTEEETR M(64.44)RPLTEEETR 0 1 1 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.3117 2 639.311351 1276.60815 74536.39 0.11444 7.3164E-05 0.10449 6.6801E-05 0.21893 0.00013997 639.311335280853 649.319769821129 19.434 0.47677 19.434 19.206 19.683 -1.9073E-06 80 21 9 0 0 0 0.0029317 1 5153 64.439 44.135 1 0.84627 0.70219 0 19800000 10696000 9103700 25392 2119 9592 9842 39767 39767 1942 MRPLTEEETR 10 0 2 Acetyl (Protein N-term),Oxidation (M) _(ac)M(ox)RPLTEEETR_ M(1)RPLTEEETR M(46.16)RPLTEEETR 1 1 1 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3174 2 660.316634 1318.61871 75223.84 0.52536 0.00034691 0.19794 0.0001307 0.7233 0.00047761 660.316850251053 670.325012353085 27.936 0.33904 27.936 27.737 28.076 0 63 19 6 0 0 0 0.0054117 1 13135 46.158 46.158 1 1.3043 1.3596 0 13280000 5786500 7493300 25393 2119 9592 9843 39768 39768 1942 MRVNVDPEDLIPK 13 1 1 Oxidation (M) _M(ox)RVNVDPEDLIPK_ M(1)RVNVDPEDLIPK M(51.09)RVNVDPEDLIPK 0 1 1 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.416 2 771.40324 1540.79193 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.79 1 87.79 87.29 88.29 0 0 0 0 0.022559 1 52950 51.092 26.749 1 25394 1726 9593 9844 39769 39769 1563 MRVNVDPEDLIPK 13 1 1 Oxidation (M) _M(ox)RVNVDPEDLIPK_ M(1)RVNVDPEDLIPK M(48.44)RVNVDPEDLIPK 0 1 1 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.4155 2 771.40324 1540.79193 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.426 1 86.426 85.926 86.926 0 0 0 0 0.028654 1 53271 48.44 28.233 1 25395 1726 9593 9844 39770 39770 1563 MSAATVLSR 9 0 1 Oxidation (M) _M(ox)SAATVLSR_ M(1)SAATVLSR M(90.64)SAATVLSR 0 1 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.2531 2 476.250034 950.485516 94001.05 0.017367 8.2709E-06 -0.049594 -2.3619E-05 -0.032227 -1.5348E-05 476.249814294004 481.253739687571 29.687 0.25193 29.687 29.575 29.827 0 54 19 4 0 0 0 0.00051031 1 14451 90.64 64.904 1 1.1887 1.2433 0 10756000 5351100 5405300 25396 229 9594 9845 39771 39771 170 MSATFIGNSTAIQELFK 17 1 0 Oxidation (M) _M(ox)SATFIGNSTAIQELFK_ M(1)SATFIGNSTAIQELFK M(46.07)SATFIGNSTAIQELFK 0 1 0 Q8IZ29;P68371;Q8N6N5;B3KML9;Q96HX0;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q8IZ29;Q13885 Q8IZ29 TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 937.9735 2 937.471851 1872.92915 61917.6 1.1369 0.0010658 -0.62313 -0.00058417 0.51376 0.00048164 937.472130865074 941.979757436701 132.82 0.49768 132.82 132.59 133.09 0 106 22 6 0 0 0 0.00033688 1 79842 46.069 7.0635 1 0.81892 0.67361 0 10129000 5439800 4689100 25397 1660;1723 9595 9846 39772 39772 1441 MSAVSQDAIEDSR 13 0 1 Oxidation (M) _M(ox)SAVSQDAIEDSR_ M(1)SAVSQDAIEDSR M(70.49)SAVSQDAIEDSR 0 1 0 A0A024R8V6;Q9P275;B3KMW2;K7EIH0 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.3195 2 712.819738 1423.62492 NaN NaN NaN -0.07514 -5.3561E-05 NaN NaN NaN NaN 32.122 0.52666 32.122 31.861 32.388 0 0 0 0 0.00071332 1 15770 70.488 60.257 1 NaN NaN 0 4848800 4848800 0 25398 260 9596 9847 39773 39773 196 MSAVSQDAIEDSR 13 0 1 Oxidation (M) _M(ox)SAVSQDAIEDSR_ M(1)SAVSQDAIEDSR M(115.29)SAVSQDAIEDSR 0 1 0 A0A024R8V6;Q9P275;B3KMW2;K7EIH0 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.8237 2 712.819738 1423.62492 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.904 1 31.904 31.404 32.404 -1.9073E-06 0 0 0 5.1505E-11 1 15766 115.29 92.546 1 25399 260 9596 9847 39774 39774 196 MSAVSQDAIEDSR 13 0 1 Oxidation (M) _M(ox)SAVSQDAIEDSR_ M(1)SAVSQDAIEDSR M(134.3)SAVSQDAIEDSR 0 1 0 A0A024R8V6;Q9P275;B3KMW2;K7EIH0 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.8253 2 712.819738 1423.62492 72265.41 0.98445 0.00070174 0.26567 0.00018937 1.2501 0.00089111 712.819757912586 717.82387847218 31.554 0.61188 31.554 31.228 31.84 -1.9073E-06 174 54 5 0 0 0 4.1286E-14 1 15503 134.3 121.73 1 1.6233 1.5946 0 13642000 5797200 7844800 25400 260 9596 9847 39775 39775 196 MSAVSQDAIEDSR 13 0 1 Oxidation (M) _M(ox)SAVSQDAIEDSR_ M(1)SAVSQDAIEDSR M(54.02)SAVSQDAIEDSR 0 1 0 A0A024R8V6;Q9P275;B3KMW2;K7EIH0 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.8217 2 712.819738 1423.62492 72735.13 0.58825 0.00041932 0.37061 0.00026418 0.95886 0.0006835 712.820326897164 717.823935849794 37.275 0.49716 37.275 37.053 37.55 -3.8147E-06 140 38 5 0 0 0 0.0011494 1 16824 54.023 51.074 1 1.2704 1.0614 0 3363600 1084400 2279200 25401 260 9596 9847 39776 39776 196 MSAVSQDAIEDSR 13 0 1 Oxidation (M) _M(ox)SAVSQDAIEDSR_ M(1)SAVSQDAIEDSR M(55.78)SAVSQDAIEDSR 0 1 0 A0A024R8V6;Q9P275;B3KMW2;K7EIH0 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.8202 2 712.819738 1423.62492 73278.99 0.42129 0.0003003 0.48995 0.00034925 0.91124 0.00064955 712.820125373525 717.824147590764 37.513 0.56813 37.513 37.235 37.804 0 177 46 5 0 0 0 0.00094089 1 16490 55.776 52.827 1 1.3098 1.1425 0 2592200 1021300 1570900 25402 260 9596 9847 39777 39777 196 MSFIAPNLSIIIGASTAAK 19 1 0 Oxidation (M) _M(ox)SFIAPNLSIIIGASTAAK_ M(1)SFIAPNLSIIIGASTAAK M(43.99)SFIAPNLSIIIGASTAAK 0 1 0 B4DWW8;E7EVX8;Q8WWY3;E7EU94;E7ESX0;E7EN72 B4DWW8 B4DWW8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 961.0285 2 961.026794 1920.03903 65965.13 0.71352 0.00068571 -0.57894 -0.00055638 0.13458 0.00012933 961.528975207842 965.534098657052 127.08 0.45804 127.08 126.89 127.35 -7.6294E-06 98 28 5 0 0 0 0.00014952 1 84855 43.991 43.991 1 2.2216 2.2111 0 6288800 2153600 4135200 25403 1046 9597 9848 39778 39778 821 MSGECAPNVSVSVSTSHTTISGGGSR 26 0 1 Oxidation (M) _M(ox)SGECAPNVSVSVSTSHTTISGGGSR_ M(1)SGECAPNVSVSVSTSHTTISGGGSR M(143.05)SGECAPNVSVSVSTSHTTISGGGSR 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.3945 3 861.058753 2580.15443 NaN NaN NaN -0.61656 -0.00053089 NaN NaN NaN NaN 56.677 0.81084 56.677 56.392 57.203 -3.8147E-06 0 0 0 1.6636E-48 1 31786 143.05 139.84 1 NaN NaN 0 172650000 172650000 0 + 25404 1308;1309 9598 9849 39779 39779 992 MSGECAPNVSVSVSTSHTTISGGGSR 26 0 1 Oxidation (M) _M(ox)SGECAPNVSVSVSTSHTTISGGGSR_ M(1)SGECAPNVSVSVSTSHTTISGGGSR M(89.3)SGECAPNVSVSVSTSHTTISGGGSR 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.3936 3 861.058753 2580.15443 NaN NaN NaN -0.41696 -0.00035903 NaN NaN NaN NaN 55.697 0.81612 55.697 55.403 56.219 0 0 0 0 2.052E-17 1 31805 89.297 85.635 1 NaN NaN 0 206210000 206210000 0 + 25405 1308;1309 9598 9849 39780 39780 992 MSGECAPNVSVSVSTSHTTISGGGSR 26 0 1 Unmodified _MSGECAPNVSVSVSTSHTTISGGGSR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 856.0618 3 855.727114 2564.15951 NaN NaN NaN -0.59883 -0.00051243 NaN NaN NaN NaN 72.386 0.82516 72.386 72.109 72.934 7.6294E-06 0 0 0 2.2199E-10 1 38107 66.282 65.179 1 NaN NaN 0 36960000 36960000 0 + 25406 1308;1309 9598 9850 39781 39781 MSGECAPNVSVSVSTSHTTISGGGSR 26 0 1 Unmodified _MSGECAPNVSVSVSTSHTTISGGGSR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 856.395 3 855.727114 2564.15951 NaN NaN NaN -0.39141 -0.00033494 NaN NaN NaN NaN 72.864 0.90518 72.864 72.585 73.49 0 0 0 0 0.042956 1 37574 23.284 23.284 1 NaN NaN 0 38245000 38245000 0 + 25407 1308;1309 9598 9850 39782 39782 MSGGWELELNGTEAK 15 1 0 Oxidation (M) _M(ox)SGGWELELNGTEAK_ M(1)SGGWELELNGTEAK M(83.62)SGGWELELNGTEAK 0 1 0 A8K651;Q07021;I3L3Q7;I3L3B0 A8K651 A8K651 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.3785 2 819.37742 1636.74029 70814.95 0.60337 0.00049438 -0.17563 -0.00014391 0.42773 0.00035048 819.37742441381 823.384561524473 82.098 0.34633 82.098 81.933 82.279 0 89 29 5 0 0 0 3.9099E-05 1 50222 83.617 77.646 1 2.1042 2.1008 0 15042000 5540600 9501900 25408 756 9599 9851 39783 39783 586 MSGLIVGSAFGPIK 14 1 0 Unmodified _MSGLIVGSAFGPIK_ 0 0 0 Q9UKN8;Q05CN7 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8859 2 688.883955 1375.75336 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.11 1 110.11 109.61 110.61 0 0 0 0 0.0061464 1 70838 54.784 39.633 1 25409 2107 9600 9852 39784 39784 MSLLLVYGSWFQPTIER 17 0 1 Oxidation (M) _M(ox)SLLLVYGSWFQPTIER_ M(1)SLLLVYGSWFQPTIER M(91.91)SLLLVYGSWFQPTIER 0 1 0 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1033.535 2 1028.53224 2055.04993 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.49 1 131.49 130.99 131.99 0 0 0 0 6.2902E-06 1 87983 91.914 77.038 1 25410 1752 9601 9853 39785 39785 1605 MSLLQLVEILQSK 13 1 0 Oxidation (M) _M(ox)SLLQLVEILQSK_ M(1)SLLQLVEILQSK M(206.1)SLLQLVEILQSK 0 1 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.4811 2 759.434009 1516.85347 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.5 1 133.5 133 134 0 0 0 0 2.0015E-72 1 89703 206.1 180.44 1 25411 1088;1189 9602 9854 39786 39786 833 MSMEISIHR 9 0 1 2 Oxidation (M) _M(ox)SM(ox)EISIHR_ M(1)SM(1)EISIHR M(42.07)SM(42.07)EISIHR 0 2 0 P53350;B4E083;Q58A51;I3L387 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.2935 2 568.265358 1134.51616 79293.12 0.77309 0.00043932 1.1501 0.00065354 1.9232 0.0010929 568.768722706803 573.270036522018 24.244 0.48393 24.244 23.936 24.42 0 42 21 4 0 0 0 0.025665 1 9987 42.075 35.972 1 3.1806 3.1933 0 7900000 2041300 5858800 25412 1604 9603 9855 39787 39787 1391;1392 MSMEISIHR 9 0 1 2 Oxidation (M) _M(ox)SM(ox)EISIHR_ M(1)SM(1)EISIHR M(40.06)SM(40.06)EISIHR 0 2 0 P53350;B4E083;Q58A51;I3L387 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.2935 2 568.265358 1134.51616 73469.42 0.26991 0.00015338 2.4722 0.0014049 2.7421 0.0015583 568.767537211155 573.270311983224 23.943 0.4266 23.943 23.701 24.127 0 49 16 5 0 0 0 0.026977 1 9785 40.058 30.818 1 2.4194 2.4072 0 7800700 1769800 6030900 25413 1604 9603 9855 39788 39788 1391;1392 MSNALAIQVDSEGK 14 1 0 Oxidation (M) _M(ox)SNALAIQVDSEGK_ M(1)SNALAIQVDSEGK M(91.91)SNALAIQVDSEGK 0 1 0 B7Z9X2;B4DY36;A0A024R6E3;Q6I9S2;Q13573;G3V3A4;B4DEG7;Q0D2M5;Q6P151;G3V5R3 B7Z9X2 B7Z9X2 SNW1 SNW domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.8677 2 739.861405 1477.70826 NaN NaN NaN -0.43594 -0.00032253 NaN NaN NaN NaN 59.73 0.18691 59.73 59.644 59.83 0 0 0 0 1.061E-05 1 34042 91.914 81.391 1 NaN NaN 0 4104800 0 4104800 25414 203 9604 9856 39789 39789 161 MSNALAIQVDSEGK 14 1 0 Oxidation (M) _M(ox)SNALAIQVDSEGK_ M(1)SNALAIQVDSEGK M(100.19)SNALAIQVDSEGK 0 1 0 B7Z9X2;B4DY36;A0A024R6E3;Q6I9S2;Q13573;G3V3A4;B4DEG7;Q0D2M5;Q6P151;G3V5R3 B7Z9X2 B7Z9X2 SNW1 SNW domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.871 2 739.861405 1477.70826 NaN NaN NaN 0.024412 1.8062E-05 NaN NaN NaN NaN 58.563 0.13904 58.563 58.502 58.641 -3.8147E-06 0 0 0 7.8493E-07 1 34068 100.19 81.919 1 NaN NaN 0 4606800 0 4606800 25415 203 9604 9856 39790 39790 161 MSQEEVNVFR 10 0 1 Oxidation (M) _M(ox)SQEEVNVFR_ M(1)SQEEVNVFR M(62.56)SQEEVNVFR 0 1 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3224 2 627.792795 1253.57104 77872.72 0.69263 0.00043483 0.29441 0.00018483 0.98703 0.00061965 627.79360908706 632.796836549053 51.413 0.55077 51.413 51.181 51.732 3.8147E-06 142 50 4 0 0 0 0.042526 1 28526 62.558 51.728 1 1.6634 1.7166 0 19991000 7485300 12506000 25416 511 9605 9857 39791 39791 358 MSQEEVNVFR 10 0 1 Oxidation (M) _M(ox)SQEEVNVFR_ M(1)SQEEVNVFR M(76.06)SQEEVNVFR 0 1 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.4984 2 627.792795 1253.57104 77331.65 0.63286 0.00039731 -0.16751 -0.00010516 0.46535 0.00029214 627.793366300745 632.796523895816 50.129 0.45119 50.129 49.951 50.402 0 130 40 4 0 0 0 0.051035 1 28413 76.064 67.201 1 1.8375 1.8409 0 18500000 7097200 11403000 25417 511 9605 9857 39792 39792 358 MSQVAPSLSALIGEAVGAR 19 0 1 Oxidation (M) _M(ox)SQVAPSLSALIGEAVGAR_ M(1)SQVAPSLSALIGEAVGAR M(114.74)SQVAPSLSALIGEAVGAR 0 1 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 936.9971 2 936.996025 1871.9775 62330.82 0.83121 0.00077884 -0.26813 -0.00025123 0.56308 0.00052761 936.99600260359 942.000024464102 125.78 0.85463 125.78 125.43 126.29 -7.6294E-06 462 59 12 0 0 0 6.6628E-17 2 81694 114.74 114.74 1 1.1983 1.3871 0 166040000 74893000 91150000 25418 785 9606 9858 39793;39794 39794 621 MSQVAPSLSALIGEAVGAR 19 0 1 Oxidation (M) _M(ox)SQVAPSLSALIGEAVGAR_ M(1)SQVAPSLSALIGEAVGAR M(110.98)SQVAPSLSALIGEAVGAR 0 1 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 941.9997 2 936.996025 1871.9775 62996.11 0.79367 0.00074366 -0.24487 -0.00022944 0.5488 0.00051422 937.497500086397 942.000049487778 125.36 0.71828 125.36 125.05 125.77 7.6294E-06 417 48 12 0 0 0 5.7147E-13 2 83349 110.98 102.52 1 1.2265 1.4077 0 186230000 83642000 102590000 25419 785 9606 9858 39795;39796 39795 621 MSQVAPSLSALIGEAVGAR 19 0 1 Unmodified _MSQVAPSLSALIGEAVGAR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.0004 2 928.998568 1855.98258 62260.06 0.73961 0.0006871 0.48741 0.0004528 1.227 0.0011399 928.999056994909 934.00295627768 128.59 0.38414 128.59 128.38 128.77 0 168 24 10 0 0 0 1.9416E-06 2 83788 84.753 84.753 1 0.50917 0.51989 0 31001000 20820000 10181000 25420 785 9606 9859 39797;39798 39798 MSQVAPSLSALIGEAVGAR 19 0 1 Unmodified _MSQVAPSLSALIGEAVGAR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.5015 2 928.998568 1855.98258 62402.1 0.79653 0.00073998 0.12743 0.00011838 0.92396 0.00085836 928.998856794583 934.002880463955 128.2 0.40643 128.2 128.01 128.41 0 158 25 9 0 0 0 4.5047E-08 2 85617 91.207 91.207 1 0.5301 0.58457 0 41379000 27191000 14188000 25421 785 9606 9859 39799;39800 39799 MSSALESVTVSDRPLGVSITK 21 1 1 Oxidation (M) _M(ox)SSALESVTVSDRPLGVSITK_ M(1)SSALESVTVSDRPLGVSITK M(50.88)SSALESVTVSDRPLGVSITK 0 1 1 A0A0A0MRJ2;Q5VTZ4;P18847;Q7Z567 A0A0A0MRJ2 A0A0A0MRJ2 ATF3 Cyclic AMP-dependent transcription factor ATF-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.7276 3 731.719226 2192.13585 70342.88 1.2493 0.00091412 -0.11886 -8.6973E-05 1.1304 0.00082714 732.387334867398 737.72668851364 90.834 0.54887 90.834 90.582 91.13 0 223 45 7 0 0 0 3.2602E-07 1 54817 50.883 50.883 1 0.8443 0.998 0 38216000 20546000 17670000 25422 466 9607 9860 39801 39801 325 MSSALESVTVSDRPLGVSITK 21 1 1 Oxidation (M) _M(ox)SSALESVTVSDRPLGVSITK_ M(1)SSALESVTVSDRPLGVSITK M(101.17)SSALESVTVSDRPLGVSITK 0 1 1 A0A0A0MRJ2;Q5VTZ4;P18847;Q7Z567 A0A0A0MRJ2 A0A0A0MRJ2 ATF3 Cyclic AMP-dependent transcription factor ATF-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.0616 3 731.719226 2192.13585 69789.72 0.7784 0.00056957 -0.1421 -0.00010398 0.6363 0.00046559 732.053591416215 737.726444885262 89.843 0.53744 89.843 89.627 90.164 0 228 47 6 0 0 0 7.3296E-16 2 55508 101.17 101.17 1 0.89411 1.0387 0 38553000 19756000 18797000 25423 466 9607 9860 39802;39803 39803 325 MSSALESVTVSDRPLGVSITK 21 1 1 Unmodified _MSSALESVTVSDRPLGVSITK_ 0 0 1 A0A0A0MRJ2;Q5VTZ4;P18847;Q7Z567 A0A0A0MRJ2 A0A0A0MRJ2 ATF3 Cyclic AMP-dependent transcription factor ATF-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.3958 3 726.387588 2176.14093 71109.57 0.70701 0.00051356 0.22812 0.0001657 0.93513 0.00067926 727.056368254852 732.395559743425 108.94 0.3158 108.94 108.79 109.1 7.6294E-06 46 14 6 0 0 0 0.012576 1 61763 22.375 22.375 1 1.5152 1.2755 0 4256500 1760600 2496000 25424 466 9607 9861 39804 39804 MSSFVEPPDIVK 12 1 0 Oxidation (M) _M(ox)SSFVEPPDIVK_ M(1)SSFVEPPDIVK M(117.7)SSFVEPPDIVK 0 1 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.8525 2 682.841953 1363.66935 NaN NaN NaN 0.97008 0.00066241 NaN NaN NaN NaN 85.822 0.39339 85.822 85.677 86.071 0 0 0 0 6.6577E-10 1 51604 117.7 103.49 1 NaN NaN 0 7969200 0 7969200 25425 1400 9608 9862 39805 39805 1077 MSSFVEPPDIVK 12 1 0 Oxidation (M) _M(ox)SSFVEPPDIVK_ M(1)SSFVEPPDIVK M(110.53)SSFVEPPDIVK 0 1 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.8535 2 682.841953 1363.66935 NaN NaN NaN 3.1992 0.0021845 NaN NaN NaN NaN 84.91 0.29444 84.91 84.724 85.018 -7.6294E-06 0 0 0 8.4461E-09 1 52187 110.53 75.023 1 NaN NaN 0 4650500 0 4650500 25426 1400 9608 9862 39806 39806 1077 MSSTFIGNSTAIQELFK 17 1 0 Oxidation (M) _M(ox)SSTFIGNSTAIQELFK_ M(1)SSTFIGNSTAIQELFK M(42.79)SSTFIGNSTAIQELFK 0 1 0 Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q9BV28 Q9BV28 TUBB3 Tubulin beta-3 chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.9774 2 945.469309 1888.92406 NaN NaN NaN -0.57059 -0.00053948 NaN NaN NaN NaN 118.45 0.48451 118.45 118.22 118.7 0 0 0 0 0.0031813 1 77848 42.789 34.484 1 NaN NaN 0 7816400 0 7816400 25427 502 9609 9863 39807 39807 352 MSSTFIGNSTAIQELFK 17 1 0 Unmodified _MSSTFIGNSTAIQELFK_ 0 0 0 Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92 Q9BV28 Q9BV28 TUBB3 Tubulin beta-3 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 937.2208 2 937.471851 1872.92915 62441.27 1.0278 0.00096357 -0.93725 -0.00087865 0.090587 8.4923E-05 937.972884769062 941.979737688591 133.07 0.44818 133.07 132.89 133.34 0 129 21 7 0 0 0 0.054976 1 80916 21.942 0 1 0.75503 0.60304 0 9156700 5300300 3856400 25428 502 9609 9864 39808 39808 MSSYAFFVQTCR 12 0 1 Oxidation (M) _M(ox)SSYAFFVQTCR_ M(1)SSYAFFVQTCR M(106.35)SSYAFFVQTCR 0 1 0 Q5U071;P26583;D6R9A6;Q9NYD7;Q75MM1;Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;B2RPK0;P09429 Q5U071;Q5T7C4 Q5U071 HMGB2;HMG1;WUGSC:H_NH0244E06.1;HMGB1;HMGB1P1 High mobility group protein B2;Putative high mobility group protein B1-like 1;High mobility group protein B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.3369 2 756.834136 1511.65372 71126.36 0.86599 0.00065541 -0.059489 -4.5023E-05 0.8065 0.00061039 756.834013911024 761.839311700086 84.321 0.66484 84.321 84.134 84.799 0 202 52 7 0 0 0 6.6194E-06 1 50599 106.35 103 1 0.35792 0.36983 0 37160000 27408000 9752000 25429 1521;392 9610 9865 39809 39809 284 MSSYAFFVQTCR 12 0 1 Oxidation (M) _M(ox)SSYAFFVQTCR_ M(1)SSYAFFVQTCR M(64.44)SSYAFFVQTCR 0 1 0 Q5U071;P26583;D6R9A6;Q9NYD7;Q75MM1;Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;B2RPK0;P09429 Q5U071;Q5T7C4 Q5U071 HMGB2;HMG1;WUGSC:H_NH0244E06.1;HMGB1;HMGB1P1 High mobility group protein B2;Putative high mobility group protein B1-like 1;High mobility group protein B1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.8342 2 756.834136 1511.65372 NaN NaN NaN -0.17279 -0.00013077 NaN NaN NaN NaN 83.312 0.59058 83.312 83.079 83.669 0 0 0 0 0.0013027 1 50924 64.439 59.125 1 NaN NaN 0 16404000 16404000 0 25430 1521;392 9610 9865 39810 39810 284 MSSYAFFVQTCR 12 0 1 Oxidation (M) _M(ox)SSYAFFVQTCR_ M(1)SSYAFFVQTCR M(58.68)SSYAFFVQTCR 0 1 0 Q5U071;P26583;D6R9A6;Q9NYD7;Q75MM1;Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;B2RPK0;P09429 Q5U071;Q5T7C4 Q5U071 HMGB2;HMG1;WUGSC:H_NH0244E06.1;HMGB1;HMGB1P1 High mobility group protein B2;Putative high mobility group protein B1-like 1;High mobility group protein B1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.8349 2 756.834136 1511.65372 NaN NaN NaN -0.67998 -0.00051464 NaN NaN NaN NaN 96.521 0.68627 96.521 96.228 96.915 0 0 0 0 0.0022887 1 54066 58.676 58.369 1 NaN NaN 0 8228500 8228500 0 25431 1521;392 9610 9865 39811 39811 284 MSSYAFFVQTCR 12 0 1 Oxidation (M) _M(ox)SSYAFFVQTCR_ M(1)SSYAFFVQTCR M(54.47)SSYAFFVQTCR 0 1 0 Q5U071;P26583;D6R9A6;Q9NYD7;Q75MM1;Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;B2RPK0;P09429 Q5U071;Q5T7C4 Q5U071 HMGB2;HMG1;WUGSC:H_NH0244E06.1;HMGB1;HMGB1P1 High mobility group protein B2;Putative high mobility group protein B1-like 1;High mobility group protein B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.8365 2 756.834136 1511.65372 68861.65 0.42157 0.00031906 -0.55935 -0.00042334 -0.13778 -0.00010428 756.833971215138 761.83779517074 96.479 0.78243 96.479 96.172 96.954 0 169 41 6 0 0 0 0.0019646 1 53188 54.471 54.471 1 0.11497 0.095593 0 7501500 6518900 982590 25432 1521;392 9610 9865 39812 39812 284 MSTEEIIQR 9 0 1 Oxidation (M) _M(ox)STEEIIQR_ M(1)STEEIIQR M(57.96)STEEIIQR 0 1 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5;E9PMD8;E9PN50;E9PLG2 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.7811 2 561.776613 1121.53867 NaN NaN NaN 0.18659 0.00010482 NaN NaN NaN NaN 32.953 0.16486 32.953 32.812 32.977 0 0 0 0 0.0065958 1 16351 57.96 38.445 1 NaN NaN 0 2957400 0 2957400 25433 617 9611 9866 39813 39813 468 MSTEEIIQR 9 0 1 Oxidation (M) _M(ox)STEEIIQR_ M(1)STEEIIQR M(69.82)STEEIIQR 0 1 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5;E9PMD8;E9PN50;E9PLG2 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.7805 2 561.776613 1121.53867 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.378 1 32.378 31.878 32.878 0 0 0 0 0.0016668 1 16102 69.825 41.651 1 25434 617 9611 9866 39814 39814 468 MSVEADINGLR 11 0 1 Oxidation (M) _M(ox)SVEADINGLR_ M(1)SVEADINGLR M(94.69)SVEADINGLR 0 1 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;B4DE59;K7EMS3 CON__P02533;B4DE59 CON__P02533 KRT14;KRT19 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.8019 2 610.80062 1219.58669 NaN NaN NaN 0.56613 0.00034579 NaN NaN NaN NaN 61.296 0.33661 61.296 61.09 61.427 3.8147E-06 0 0 0 2.6418E-05 1 35859 94.692 71.952 1 NaN NaN 0 5510700 5510700 0 + 25435 1150;964 9612 9867 39815 39815 777 MSVQPTVSLGGFEITPPVVLR 21 0 1 Oxidation (M) _M(ox)SVQPTVSLGGFEITPPVVLR_ M(1)SVQPTVSLGGFEITPPVVLR M(76.16)SVQPTVSLGGFEITPPVVLR 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1122.6116 2 1122.10885 2242.20314 57297.27 0.59612 0.00066891 -0.35144 -0.00039435 0.24468 0.00027456 1122.61022873702 1127.61400488064 129.98 0.44792 129.98 129.58 130.03 0 249 23 15 0 0 0 1.2851E-08 2 84542 76.156 76.156 1 1.6517 1.9587 0 604710000 232400000 372320000 25436 559;1213;2078 9613 9868 39816;39817 39817 417 MSVQPTVSLGGFEITPPVVLR 21 0 1 Oxidation (M) _M(ox)SVQPTVSLGGFEITPPVVLR_ M(1)SVQPTVSLGGFEITPPVVLR M(102.28)SVQPTVSLGGFEITPPVVLR 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1127.615 2 1122.10885 2242.20314 57202.92 0.44103 0.00049488 -0.22312 -0.00025036 0.21791 0.00024451 1122.61034118854 1127.6141736778 130.13 0.71692 130.13 130.03 130.75 0 380 44 16 0 0 0 1.2797E-15 2 85035 102.28 102.28 1 1.4056 1.6664 0 553520000 229000000 324530000 25437 559;1213;2078 9613 9868 39818;39819 39818 417 MSVQPTVSLGGFEITPPVVLR 21 0 1 Oxidation (M) _M(ox)SVQPTVSLGGFEITPPVVLR_ M(1)SVQPTVSLGGFEITPPVVLR M(109.79)SVQPTVSLGGFEITPPVVLR 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1127.6144 2 1122.10885 2242.20314 57243.49 0.28628 0.00032124 -0.27602 -0.00030973 0.010261 1.1514E-05 1122.61034480694 1127.61409874928 129.65 1.2254 129.65 129.26 130.48 0 718 78 15 0 0 0 3.5565E-16 5 86408 109.79 109.79 1 1.5233 1.7885 0 847100000 329560000 517530000 25438 559;1213;2078 9613 9868 39820;39821;39822;39823;39824 39821 417 MSVQPTVSLGGFEITPPVVLR 21 0 1 Oxidation (M) _M(ox)SVQPTVSLGGFEITPPVVLR_ M(1)SVQPTVSLGGFEITPPVVLR M(41.64)SVQPTVSLGGFEITPPVVLR 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1123.1088 2 1122.10885 2242.20314 59250.82 0.49507 0.00055553 -0.040446 -4.5385E-05 0.45463 0.00051014 1122.6102814513 1127.11333724315 132.38 0.39682 132.38 132.19 132.59 -1.5259E-05 85 21 6 0 0 0 3.3419E-05 1 88663 41.644 41.644 1 0.89194 0.90446 0 5426200 2444100 2982100 25439 559;1213;2078 9613 9868 39825 39825 417 MSVQPTVSLGGFEITPPVVLR 21 0 1 Oxidation (M) _M(ox)SVQPTVSLGGFEITPPVVLR_ M(1)SVQPTVSLGGFEITPPVVLR M(44.25)SVQPTVSLGGFEITPPVVLR 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1122.6105 2 1122.10885 2242.20314 57154.91 0.45227 0.00050749 -0.13777 -0.00015459 0.3145 0.0003529 1122.6102193949 1127.61434393204 134.73 0.28653 134.73 134.66 134.95 0 17 5 7 0 0 0 2.2617E-05 1 81581 44.252 44.252 1 0.36175 0.31597 0 204150000 148840000 55304000 25440 559;1213;2078 9613 9868 39826 39826 417 MSVQPTVSLGGFEITPPVVLR 21 0 1 Unmodified _MSVQPTVSLGGFEITPPVVLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1119.1165 2 1114.11139 2226.20823 58172.1 0.23192 0.00025839 0.16728 0.00018637 0.39921 0.00044476 1114.61316821256 1119.61721128452 132.78 0.57809 132.78 132.52 133.1 0 249 29 12 0 0 0 1.1527E-08 2 86653 82.55 82.55 1 1.0207 1.1357 0 77651000 39402000 38249000 25441 559;1213;2078 9613 9869 39827;39828 39827 MSVQPTVSLGGFEITPPVVLR 21 0 1 Unmodified _MSVQPTVSLGGFEITPPVVLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1114.1122 2 1114.11139 2226.20823 58002.48 0.45002 0.00050137 -0.14324 -0.00015958 0.30678 0.00034179 1114.61277756477 1119.61686156498 132.36 0.58987 132.36 132.12 132.71 0 282 34 12 0 0 0 1.055E-28 2 88556 129.38 129.38 1 0.98686 1.1237 0 108540000 53648000 54895000 25442 559;1213;2078 9613 9869 39829;39830 39830 MSVQPTVSLGGFEITPPVVLR 21 0 1 Unmodified _MSVQPTVSLGGFEITPPVVLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;E5RI98;Q9NX34 A0A0S2Z4G7;E5RI98;Q9NX34 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1114.6099 2 1114.11139 2226.20823 58701.11 0.19321 0.00021525 -0.73295 -0.00081659 -0.53975 -0.00060134 1114.61251350768 1119.11187441386 134.9 0.29472 134.9 134.7 135 0 22 5 6 0 0 0 2.3822E-05 1 82582 46.926 46.926 1 0.6775 0.58045 0 40991000 25720000 15271000 25443 559;1213;2078 9613 9869 39831 39831 MTDQEAIQDLWQWR 14 0 1 Unmodified _MTDQEAIQDLWQWR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;Q9BTI9 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 910.9301 2 910.425236 1818.83592 65900.14 0.77127 0.00070218 0.59901 0.00054535 1.3703 0.0012475 910.42518579855 915.931728364031 119.23 0.46461 119.23 119.03 119.49 -7.6294E-06 124 30 6 0 0 0 0.0013286 1 76723 54.471 50.13 1 0.99444 1.0103 0 7492300 3598500 3893800 25444 559 9614 9870 39832 39832 MTDQEAIQDLWQWR 14 0 1 Unmodified _MTDQEAIQDLWQWR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;Q9BTI9 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 910.4256 2 910.425236 1818.83592 65042.79 0.67959 0.00061872 0.17445 0.00015882 0.85404 0.00077754 910.424978363903 915.931675178831 118.78 0.44001 118.78 118.54 118.98 0 130 27 6 0 0 0 2.8438E-07 2 78160 111.86 107.51 1 1.0051 0.98611 0 14012000 6530000 7481900 25445 559 9614 9870 39833;39834 39834 MTDQEAIQDLWQWR 14 0 1 Unmodified _MTDQEAIQDLWQWR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;Q9BTI9 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 910.928 2 910.425236 1818.83592 63017.94 0.5305 0.00048298 0.3513 0.00031983 0.8818 0.00080281 910.425678304543 915.428093216349 131.52 0.7374 131.52 131.08 131.81 0 133 34 6 0 0 0 1.9425E-09 2 79803 118.23 101.7 1 0.71624 0.58595 0 13496000 7964400 5531600 25446 559 9614 9870 39835;39836 39836 MTDQEAIQDLWQWR 14 0 1 Unmodified _MTDQEAIQDLWQWR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;Q9BTI9 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 915.9353 2 910.425236 1818.83592 NaN NaN NaN 0.56243 0.00051205 NaN NaN NaN NaN 131.31 0.57352 131.31 131.11 131.69 0 0 0 0 0.019165 1 78731 45.879 41.363 1 NaN NaN 0 6535800 0 6535800 25447 559 9614 9870 39837 39837 MTDQEAIQDLWQWR 14 0 1 Unmodified _MTDQEAIQDLWQWR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;Q9BTI9 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 910.9291 2 910.425236 1818.83592 NaN NaN NaN -0.80531 -0.00073317 NaN NaN NaN NaN 131.32 0.69225 131.32 130.9 131.6 0 0 0 0 4.8969E-05 1 78747 91.313 75.742 1 NaN NaN 0 7470200 7470200 0 25448 559 9614 9870 39838 39838 MTDQEAIQDLWQWR 14 0 1 Oxidation (M) _M(ox)TDQEAIQDLWQWR_ M(1)TDQEAIQDLWQWR M(176.78)TDQEAIQDLWQWR 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;Q9BTI9 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 918.4229 2 918.422693 1834.83083 NaN NaN NaN -1.1769 -0.0010809 NaN NaN NaN NaN 114.68 1.0307 114.68 114 115.03 7.6294E-06 0 0 0 1.4365E-55 1 72708 176.78 153.9 1 NaN NaN 0 24010000 24010000 0 25449 559 9614 9871 39839 39839 418 MTDQEAIQDLWQWR 14 0 1 Oxidation (M) _M(ox)TDQEAIQDLWQWR_ M(1)TDQEAIQDLWQWR M(188.96)TDQEAIQDLWQWR 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;Q9BTI9 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.9252 2 918.422693 1834.83083 62167.25 0.67106 0.00061631 -0.80001 -0.00073475 -0.12895 -0.00011843 918.422094319393 923.425919896025 114.15 1.0849 114.15 113.44 114.53 7.6294E-06 360 77 9 0 0 0 2.1552E-57 2 74098 188.96 179.77 1 1.244 1.443 0 65198000 27714000 37484000 25450 559 9614 9871 39840;39841 39840 418 MTDQEAIQDLWQWR 14 0 1 Oxidation (M) _M(ox)TDQEAIQDLWQWR_ M(1)TDQEAIQDLWQWR M(119.39)TDQEAIQDLWQWR 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;Q9BTI9 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 918.4216 2 918.422693 1834.83083 62267.17 0.86121 0.00079095 -0.49788 -0.00045726 0.36333 0.00033369 918.421191234049 923.426675397022 125.99 1.2271 125.99 125.25 126.47 0 243 48 10 0 0 0 7.8787E-10 1 75624 119.39 119.39 1 0.42795 0.36173 0 30201000 20940000 9260800 25451 559 9614 9871 39842 39842 418 MTDQEAIQDLWQWR 14 0 1 Oxidation (M) _M(ox)TDQEAIQDLWQWR_ M(1)TDQEAIQDLWQWR M(150.09)TDQEAIQDLWQWR 0 1 0 A0A0S2Z4G7;A0A0S2Z491;P06748;Q9BTI9 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 918.4227 2 918.422693 1834.83083 61967.34 0.55659 0.00051119 -0.78746 -0.00072322 -0.23087 -0.00021203 918.420944275225 923.426971785577 125.87 1.6827 125.87 125.1 126.79 0 301 67 11 0 0 0 1.3494E-22 2 74598 150.09 135.67 1 0.43831 0.37569 0 21011000 14783000 6228700 25452 559 9614 9871 39843;39844 39843 418 MTEIQTPENTPR 12 0 1 Oxidation (M) _M(ox)TEIQTPENTPR_ M(1)TEIQTPENTPR M(179.57)TEIQTPENTPR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.8456 2 716.840473 1431.66639 70940.75 0.66863 0.0004793 -0.31963 -0.00022913 0.349 0.00025018 716.84026119139 721.844394599587 34.754 0.57766 34.754 34.502 35.08 0 300 49 8 0 0 0 5.5081E-38 2 17319 179.57 172.92 1 1.0482 1.1971 0 123590000 58365000 65228000 25453 2070 9615 9872 39845;39846 39845 1902 MTEIQTPENTPR 12 0 1 Oxidation (M) _M(ox)TEIQTPENTPR_ M(1)TEIQTPENTPR M(225.01)TEIQTPENTPR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.841 2 716.840473 1431.66639 70208.99 0.58549 0.0004197 -0.005736 -4.1118E-06 0.57976 0.00041559 716.840473998585 721.844604207078 33.97 0.54594 33.97 33.738 34.284 0 266 42 8 0 0 0 1.0196E-74 2 17079 225.01 207.98 1 1.1149 1.2713 0 138770000 65522000 73246000 25454 2070 9615 9872 39847;39848 39848 1902 MTEIQTPENTPR 12 0 1 Oxidation (M) _M(ox)TEIQTPENTPR_ M(1)TEIQTPENTPR M(73.78)TEIQTPENTPR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 716.8409 2 716.840473 1431.66639 70430.5 0.4835 0.00034659 0.072296 5.1824E-05 0.55579 0.00039841 716.84065493619 721.844729488677 40.024 0.6573 40.024 39.674 40.331 0 308 51 8 0 0 0 0.0001208 3 18307 73.781 63.828 1 1.2725 1.0396 0 15824000 7658100 8166400 25455 2070 9615 9872 39849;39850;39851 39850 1902 MTEIQTPENTPR 12 0 1 Oxidation (M) _M(ox)TEIQTPENTPR_ M(1)TEIQTPENTPR M(70.1)TEIQTPENTPR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 716.8411 2 716.840473 1431.66639 70160.27 0.4367 0.00031304 -0.36537 -0.00026191 0.07133 5.1132E-05 716.840393482817 721.844413528096 40.271 0.72063 40.271 39.918 40.638 -3.8147E-06 343 60 8 0 0 0 0.00024119 2 17924 70.1 60.147 1 1.2359 1.0526 0 19606000 8778700 10827000 25456 2070 9615 9872 39852;39853 39853 1902 MTEIQTPENTPR 12 0 1 Unmodified _MTEIQTPENTPR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.8428 2 708.843016 1415.67148 NaN NaN NaN 0.037895 2.6861E-05 NaN NaN NaN NaN 51.776 0.67932 51.776 51.427 52.106 -3.8147E-06 0 0 0 0.007134 1 24828 59.067 48.238 1 NaN NaN 0 4326000 4326000 0 25457 2070 9615 9873 39854 39854 MTEVLDHEER 10 0 1 Oxidation (M) _M(ox)TEVLDHEER_ M(1)TEVLDHEER M(67.7)TEVLDHEER 0 1 0 Q8N523;A0A024R1I7;Q9UBB9;B4DPE5 Q8N523 Q8N523 TFIP11 Tuftelin-interacting protein 11 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.7924 2 637.787709 1273.56087 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.303 1 20.303 19.803 20.803 0 0 0 0 0.0010509 1 6598 67.704 44.964 1 25458 77 9616 9874 39855 39855 47 MTGCLEFSEAGK 12 1 0 Oxidation (M) _M(ox)TGCLEFSEAGK_ M(1)TGCLEFSEAGK M(91.55)TGCLEFSEAGK 0 1 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.2982 2 673.29177 1344.56899 75903.33 0.65098 0.0004383 -0.65825 -0.00044319 -0.0072638 -4.8907E-06 673.291672431816 677.298037952744 49.12 0.32511 49.12 48.931 49.257 0 85 24 4 0 0 0 8.3525E-05 1 26862 91.549 91.549 1 0.81818 0.85167 0 12364000 3871400 8493100 25459 1233 9617 9875 39856 39856 949 MTGHQALINQVLFSPDSR 18 0 1 Oxidation (M) _M(ox)TGHQALINQVLFSPDSR_ M(1)TGHQALINQVLFSPDSR M(59.51)TGHQALINQVLFSPDSR 0 1 0 B4E074;Q9NVX2;A0A0A0MRH0;B4E303;K7EN33 B4E074 B4E074 NLE1 Notchless protein homolog 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.678 3 677.342313 2029.00511 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.011 1 90.011 89.511 90.511 0 0 0 0 7.1017E-05 1 54352 59.512 37.077 1 25460 1060 9618 9876 39857 39857 825 MTHNLLLNYGLYR 13 0 1 Oxidation (M) _M(ox)THNLLLNYGLYR_ M(1)THNLLLNYGLYR M(48.47)THNLLLNYGLYR 0 1 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;Q92769;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.2831 3 541.948575 1622.8239 85863.3 0.7003 0.00037952 -1.0984 -0.00059526 -0.39807 -0.00021573 541.948703841469 545.283736437513 87.398 0.76707 87.398 86.889 87.656 0 185 67 4 0 0 0 0.0011214 2 52600 48.467 48.467 1 1.0684 1.0895 0 30550000 16813000 13737000 25461 1715;1952 9619 9877 39858;39859 39859 1547 MTHNLLLNYGLYR 13 0 1 Oxidation (M) _M(ox)THNLLLNYGLYR_ M(1)THNLLLNYGLYR M(61.53)THNLLLNYGLYR 0 1 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;Q92769;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.9489 3 541.948575 1622.8239 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.896 1 87.896 87.396 88.396 0 0 0 0 0.00079028 1 53005 61.532 55.095 1 25462 1715;1952 9619 9877 39860 39860 1547 MTHNLLLNYGLYR 13 0 1 Oxidation (M) _M(ox)THNLLLNYGLYR_ M(1)THNLLLNYGLYR M(68.17)THNLLLNYGLYR 0 1 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;Q92769;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.9487 3 541.948575 1622.8239 80003.66 0.7567 0.00041009 -0.324 -0.00017559 0.4327 0.0002345 542.282726546556 545.284553507484 85.659 0.88678 85.659 85.241 86.128 7.6294E-06 422 68 8 0 0 0 6.2812E-05 2 52560 68.171 68.171 1 1.2232 1.3961 0 144850000 70043000 74804000 25463 1715;1952 9619 9877 39861;39862 39861 1547 MTHNLLLNYGLYR 13 0 1 Oxidation (M) _M(ox)THNLLLNYGLYR_ M(1)THNLLLNYGLYR M(120.09)THNLLLNYGLYR 0 1 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;Q92769;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.4261 2 812.419225 1622.8239 67703.38 0.86564 0.00070326 0.26763 0.00021743 1.1333 0.00092069 812.419101577935 817.423605373005 85.758 0.61562 85.758 85.358 85.973 0 184 45 7 0 0 0 2.4751E-09 2 52679 120.09 113.2 1 1.1579 1.25 0 26470000 13813000 12657000 25464 1715;1952 9619 9877 39863;39864 39863 1547 MTHNLLLNYGLYR 13 0 1 Oxidation (M) _M(ox)THNLLLNYGLYR_ M(1)THNLLLNYGLYR M(72.01)THNLLLNYGLYR 0 1 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;Q92769;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 817.4228 2 812.419225 1622.8239 68570.91 0.70973 0.0005766 0.17678 0.00014362 0.88652 0.00072022 812.418886421055 817.423636131321 98.906 0.45181 98.906 98.757 99.209 0 100 24 6 0 0 0 8.1889E-05 1 55852 72.006 65.902 1 1.1716 0.98108 0 3974800 1975200 1999600 25465 1715;1952 9619 9877 39865 39865 1547 MTHNLLLNYGLYR 13 0 1 Oxidation (M) _M(ox)THNLLLNYGLYR_ M(1)THNLLLNYGLYR M(48.47)THNLLLNYGLYR 0 1 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;Q92769;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.9485 3 541.948575 1622.8239 79342.09 0.64359 0.00034879 -0.27999 -0.00015174 0.3636 0.00019706 541.948463440984 545.284581443475 98.685 0.65176 98.685 98.457 99.108 0 200 37 9 0 0 0 0.0011214 2 54794 48.467 48.467 1 0.98911 0.80434 0 12355000 6589200 5766300 25466 1715;1952 9619 9877 39866;39867 39866 1547 MTHNLLLNYGLYR 13 0 1 Oxidation (M) _M(ox)THNLLLNYGLYR_ M(1)THNLLLNYGLYR M(83)THNLLLNYGLYR 0 1 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;Q92769;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 817.4242 2 812.419225 1622.8239 67675.96 0.723 0.00058738 0.36634 0.00029762 1.0893 0.000885 812.419401070324 817.423422451296 98.681 0.34064 98.681 98.495 98.836 -7.6294E-06 107 19 8 0 0 0 6.9891E-05 2 54859 83 65.564 1 1.0351 0.88455 0 4514800 2432100 2082700 25467 1715;1952 9619 9877 39868;39869 39869 1547 MTHNLLLNYGLYR 13 0 1 Unmodified _MTHNLLLNYGLYR_ 0 0 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;Q92769;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.9541 3 536.616937 1606.82898 82800.44 0.3991 0.00021416 -0.41498 -0.00022268 -0.015879 -8.5209E-06 536.95136737409 539.952918469139 104.02 0.77968 104.02 103.74 104.52 0 283 50 9 0 0 0 0.036964 2 58219 21.351 21.351 1 1.9229 1.6018 0 6967700 2528300 4439400 25468 1715;1952 9619 9878 39870;39871 39870 MTLDDFR 7 0 1 Oxidation (M) _M(ox)TLDDFR_ M(1)TLDDFR M(125.08)TLDDFR 0 1 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.2079 2 457.207835 912.401117 NaN NaN NaN 0.27479 0.00012564 NaN NaN NaN NaN 43.232 0.54551 43.232 43.011 43.556 0 0 0 0 8.4835E-05 1 23070 125.08 98.976 1 NaN NaN 0 205370000 205370000 0 + 25469 1165 9620 9879 39872 39872 879 MTLDDFR 7 0 1 Oxidation (M) _M(ox)TLDDFR_ M(1)TLDDFR M(57.28)TLDDFR 0 1 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.2074 2 457.207835 912.401117 NaN NaN NaN 0.1809 8.2709E-05 NaN NaN NaN NaN 43.916 0.86844 43.916 43.545 44.413 0 0 0 0 0.016231 1 23543 57.281 40.354 1 NaN NaN 0 92177000 92177000 0 + 25470 1165 9620 9879 39873 39873 879 MTLDDFR 7 0 1 Oxidation (M) _M(ox)TLDDFR_ M(1)TLDDFR M(65.78)TLDDFR 0 1 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.2081 2 457.207835 912.401117 NaN NaN NaN -0.062966 -2.8789E-05 NaN NaN NaN NaN 42.282 0.86235 42.282 41.944 42.806 0 0 0 0 0.010871 1 22616 65.777 44.512 1 NaN NaN 0 88416000 88416000 0 + 25471 1165 9620 9879 39874 39874 879 MTLDDFR 7 0 1 Oxidation (M) _M(ox)TLDDFR_ M(1)TLDDFR M(57.28)TLDDFR 0 1 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.208 2 457.207835 912.401117 NaN NaN NaN 0.052851 2.4164E-05 NaN NaN NaN NaN 43.309 1.0909 43.309 42.792 43.883 0 0 0 0 0.016231 1 23291 57.281 40.354 1 NaN NaN 0 108730000 108730000 0 + 25472 1165 9620 9879 39875 39875 879 MTLDDFR 7 0 1 Oxidation (M) _M(ox)TLDDFR_ M(1)TLDDFR M(46.43)TLDDFR 0 1 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 457.2076 2 457.207835 912.401117 NaN NaN NaN 0.48423 0.00022139 NaN NaN NaN NaN 50.799 1.337 50.799 50.242 51.579 0 0 0 0 0.025714 1 24217 46.426 29.499 1 NaN NaN 0 5462100 5462100 0 + 25473 1165 9620 9879 39876 39876 879 MTLQLIK 7 1 0 Unmodified _MTLQLIK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.76 2 423.759507 845.50446 93867.04 -0.038645 -1.6376E-05 0.21566 9.1387E-05 0.17701 7.5011E-05 423.759500597441 427.766586288829 81.22 0.54469 81.22 80.907 81.452 0 107 46 4 0 0 0 0.034211 1 48281 62.714 11.748 1 0.47939 0.48599 0 10215000 5617400 4597500 25474 493 9621 9880 39877 39877 MTLQLIK 7 1 0 Unmodified _MTLQLIK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.7593 2 423.759507 845.50446 93485.89 0.199 8.4328E-05 -0.16523 -7.0017E-05 0.03377 1.431E-05 423.759417319438 427.766569420912 79.976 0.4942 79.976 79.74 80.235 0 129 38 5 0 0 0 0.031504 1 48568 67.035 20.664 1 0.58214 0.58373 0 13819000 9313500 4505100 25475 493 9621 9880 39878 39878 MTLQLIK 7 1 0 Oxidation (M) _M(ox)TLQLIK_ M(1)TLQLIK M(49.36)TLQLIK 0 1 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.7642 2 431.756964 861.499375 NaN NaN NaN 0.32512 0.00014037 NaN NaN NaN NaN 60.015 0.42824 60.015 59.83 60.259 0 0 0 0 0.02298 1 34235 49.358 11.713 1 NaN NaN 0 20510000 0 20510000 25476 493 9621 9881 39879 39879 341 MTLQLIK 7 1 0 Oxidation (M) _M(ox)TLQLIK_ M(1)TLQLIK M(55.6)TLQLIK 0 1 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 431.7567 2 431.756964 861.499375 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.679 1 60.679 60.179 61.179 0 0 0 0 0.038215 1 34628 55.604 16.767 1 25477 493 9621 9881 39880 39880 341 MTLQLIK 7 1 0 Oxidation (M) _M(ox)TLQLIK_ M(1)TLQLIK M(63.21)TLQLIK 0 1 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.7642 2 431.756964 861.499375 93569.87 0.40866 0.00017644 -0.26519 -0.0001145 0.14347 6.1944E-05 431.756751991963 435.763971882743 58.733 0.4791 58.733 58.569 59.048 -3.8147E-06 153 47 4 0 0 0 0.016424 1 34143 63.21 17.258 1 1.6061 1.6342 0 30449000 12810000 17639000 25478 493 9621 9881 39881 39881 341 MTLQLIK 7 1 0 Oxidation (M) _M(ox)TLQLIK_ M(1)TLQLIK M(61.49)TLQLIK 0 1 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 431.7566 2 431.756964 861.499375 93491.31 0.027263 1.1771E-05 -1.0981 -0.00047409 -1.0708 -0.00046232 431.756820449981 435.763984972478 59.406 0.65214 59.406 59.038 59.691 0 209 59 5 0 0 0 0.017454 2 34593 61.494 17.074 1 1.2329 1.2465 0 26717000 12939000 13778000 25479 493 9621 9881 39882;39883 39882 341 MTLVASEDYGDTLAAIQGLLK 21 1 0 Oxidation (M) _M(ox)TLVASEDYGDTLAAIQGLLK_ M(1)TLVASEDYGDTLAAIQGLLK M(68.03)TLVASEDYGDTLAAIQGLLK 0 1 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;Q14917 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1117.0814 2 1113.07213 2224.1297 56134.67 -0.39113 -0.00043535 0.69741 0.00077627 0.30629 0.00034092 1113.57555509528 1117.58132908529 133.33 0.37344 133.33 133.02 133.39 0 36 11 8 0 0 0 4.7612E-08 1 87290 68.034 68.034 1 1.7211 1.7422 0 27583000 11183000 16400000 25480 523 9622 9882 39884 39884 388 MTLVASEDYGDTLAAIQGLLK 21 1 0 Oxidation (M) _M(ox)TLVASEDYGDTLAAIQGLLK_ M(1)TLVASEDYGDTLAAIQGLLK M(102.73)TLVASEDYGDTLAAIQGLLK 0 1 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;Q14917 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1113.0692 2 1113.07213 2224.1297 57980.93 0.3528 0.00039269 0.048135 5.3577E-05 0.40094 0.00044627 1113.57462168612 1117.58144903783 133.15 0.662 133.15 132.64 133.3 0 74 30 9 0 0 0 1.2243E-15 2 89345 102.73 102.73 1 1.8094 1.9082 0 23741000 5642300 18099000 25481 523 9622 9882 39885;39886 39885 388 MTPSYEIR 8 0 1 Oxidation (M) _M(ox)TPSYEIR_ M(1)TPSYEIR M(41.45)TPSYEIR 0 1 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.7425 2 506.742042 1011.46953 84707.41 0.21366 0.00010827 0.32996 0.0001672 0.54362 0.00027547 506.742617039073 511.746543133945 40.256 0.57573 40.256 39.969 40.545 0 174 43 7 0 0 0 0.02728 1 18553 41.448 24.672 1 1.3165 1.1221 0 5545200 2307200 3238000 25482 1691 9623 9883 39887 39887 1517 MTQNPNYYNLQGISHR 16 0 1 Oxidation (M) _M(ox)TQNPNYYNLQGISHR_ M(1)TQNPNYYNLQGISHR M(42.63)TQNPNYYNLQGISHR 0 1 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.6447 3 651.307491 1950.90064 NaN NaN NaN 0.4437 0.00028898 NaN NaN NaN NaN 54.605 0.49599 54.605 54.38 54.876 0 0 0 0 0.017666 1 30613 42.633 38.665 1 NaN NaN 0 9619700 0 9619700 25483 1411 9624 9884 39888 39888 1098 MTQNPNYYNLQGISHR 16 0 1 Oxidation (M) _M(ox)TQNPNYYNLQGISHR_ M(1)TQNPNYYNLQGISHR M(122.46)TQNPNYYNLQGISHR 0 1 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.6439 3 651.307491 1950.90064 76343.06 0.79775 0.00051958 0.35342 0.00023018 1.1512 0.00074976 651.307608276792 654.643750627214 53.651 0.50161 53.651 53.369 53.87 0 197 48 7 0 0 0 3.6067E-13 1 30653 122.46 122.46 1 1.4193 1.4302 0 19512000 7233600 12279000 25484 1411 9624 9884 39889 39889 1098 MTTETASEDDNFGTAQSNK 19 1 0 Oxidation (M) _M(ox)TTETASEDDNFGTAQSNK_ M(1)TTETASEDDNFGTAQSNK M(102.73)TTETASEDDNFGTAQSNK 0 1 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1035.9391 2 1031.92893 2061.84331 61189.03 0.59604 0.00061507 0.28024 0.00028919 0.87628 0.00090425 1032.43113126708 1035.93625842307 28.91 0.22749 28.91 28.776 29.003 0 40 11 5 0 0 0 3.3454E-12 2 13756 102.73 102.73 1 2.3757 2.3393 0 8601300 2888700 5712600 25485 1205 9625 9885 39890;39891 39890 914 MTVEYVYER 9 0 1 Oxidation (M) _M(ox)TVEYVYER_ M(1)TVEYVYER M(54.61)TVEYVYER 0 1 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.2794 2 603.278989 1204.54342 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.038 1 46.038 45.538 46.538 0 0 0 0 0.011492 1 24833 54.608 34.278 1 25486 655 9626 9886 39892 39892 513 MTVEYVYER 9 0 1 Oxidation (M) _M(ox)TVEYVYER_ M(1)TVEYVYER M(96.62)TVEYVYER 0 1 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.2797 2 603.278989 1204.54342 80140.41 0.86679 0.00052292 0.18413 0.00011108 1.0509 0.000634 603.278962253549 608.283193562044 44.643 0.4357 44.643 44.367 44.803 0 90 34 4 0 0 0 0.00030326 1 24399 96.624 86.713 1 1.2568 1.2665 0 6495600 3103800 3391900 25487 655 9626 9886 39893 39893 513 MVADLVENSYSISVPIFK 18 1 0 Oxidation (M) _M(ox)VADLVENSYSISVPIFK_ M(1)VADLVENSYSISVPIFK M(65.84)VADLVENSYSISVPIFK 0 1 0 A0A024R4E5;Q00341;B2R5V9;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3 A0A024R4E5 A0A024R4E5 HDLBP Vigilin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1018.5261 2 1014.52154 2027.02853 NaN NaN NaN -0.73153 -0.00074215 NaN NaN NaN NaN 122.89 0.2979 122.89 122.78 123.08 0 0 0 0 3.7428E-05 1 79702 65.842 50.086 1 NaN NaN 0 2909100 0 2909100 25488 154 9627 9887 39894 39894 131 MVDPEKPQLGMIDR 14 1 1 2 Oxidation (M) _M(ox)VDPEKPQLGM(ox)IDR_ M(1)VDPEKPQLGM(1)IDR M(43.81)VDPEKPQLGM(43.81)IDR 0 2 1 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.2813 3 554.272619 1659.79603 80728.09 0.67705 0.00037527 -0.28955 -0.00016049 0.3875 0.00021478 554.272724593663 560.279478648323 47.472 0.7373 47.472 47.168 47.905 0 198 51 6 0 0 0 0.0020429 1 26238 43.813 39.497 1 0.91215 1.0734 0 79840000 42923000 36916000 25489 139 9628 9888 39895 39895 126;127 MVDPEKPQLGMIDR 14 1 1 2 Oxidation (M) _M(ox)VDPEKPQLGM(ox)IDR_ M(1)VDPEKPQLGM(1)IDR M(40.28)VDPEKPQLGM(40.28)IDR 0 2 1 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.2735 3 554.272619 1659.79603 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.219 1 47.219 46.719 47.719 0 0 0 0 0.006605 1 26188 40.278 21.682 1 25490 139 9628 9888 39896 39896 126;127 MVEDLISVGEEESFNLK 17 1 0 Oxidation (M) _M(ox)VEDLISVGEEESFNLK_ M(1)VEDLISVGEEESFNLK M(88.19)VEDLISVGEEESFNLK 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 982.4783 2 977.969338 1953.92412 62008.71 0.55607 0.00054382 0.17707 0.00017317 0.73315 0.00071699 978.471646440027 982.478016496108 112.7 0.62961 112.7 112.5 113.13 -7.6294E-06 230 45 8 0 0 0 6.317E-07 3 71136 88.187 88.187 1 1.2513 1.2449 0 26186000 11608000 14578000 25491 897 9629 9889 39897;39898;39899 39898 714 MVEDLISVGEEESFNLK 17 1 0 Oxidation (M) _M(ox)VEDLISVGEEESFNLK_ M(1)VEDLISVGEEESFNLK M(85.84)VEDLISVGEEESFNLK 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 978.4729 2 977.969338 1953.92412 61752.55 0.49733 0.00048638 0.13204 0.00012913 0.62937 0.0006155 978.471912092901 981.97671734706 112.23 0.52319 112.23 112 112.53 0 221 39 8 0 0 0 4.5124E-06 2 72529 85.845 85.845 1 1.3 1.3276 0 25829000 10797000 15032000 25492 897 9629 9889 39900;39901 39901 714 MVEMFLEYQNQISR 14 0 1 2 Oxidation (M) _M(ox)VEM(ox)FLEYQNQISR_ M(1)VEM(1)FLEYQNQISR M(51.29)VEM(51.29)FLEYQNQISR 0 2 0 Q9HBM1;C9JW94 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 915.4242 2 910.421304 1818.82806 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.716 1 85.716 85.216 86.216 0 0 0 0 0.0083357 1 51522 51.286 43.182 1 25493 2050 9630 9890 39902 39902 1882;1883 MVFINNIALAQIK 13 1 0 Oxidation (M) _M(ox)VFINNIALAQIK_ M(1)VFINNIALAQIK M(56.73)VFINNIALAQIK 0 1 0 E5KNY5;P42704 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.4264 2 745.923612 1489.83267 73369.81 0.57584 0.00042953 0.037618 2.806E-05 0.61346 0.00045759 745.923549926598 749.930582031003 108.64 0.49467 108.64 108.37 108.87 0 114 33 5 0 0 0 0.00082749 1 69545 56.729 56.729 1 2.7653 2.796 0 8792500 2516100 6276400 25494 1207 9631 9891 39903 39903 924 MVHIDEEMGPK 11 1 0 2 Oxidation (M) _M(ox)VHIDEEM(ox)GPK_ M(1)VHIDEEM(1)GPK M(80.69)VHIDEEM(80.69)GPK 0 2 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.3015 2 659.294313 1316.57407 74893.98 0.6539 0.00043111 0.24249 0.00015987 0.89639 0.00059099 659.294013946807 663.301343801919 23.027 0.495 23.027 22.821 23.316 0 70 24 5 0 0 0 0.00048966 2 8916 80.688 80.688 1 1.211 1.252 0 12742000 5463000 7279400 25495 878 9632 9892 39904;39905 39904 687;688 MVHIDEEMGPK 11 1 0 2 Oxidation (M) _M(ox)VHIDEEM(ox)GPK_ M(1)VHIDEEM(1)GPK M(66.57)VHIDEEM(66.57)GPK 0 2 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.3015 2 659.294313 1316.57407 73122.42 0.66325 0.00043728 -0.53519 -0.00035285 0.12807 8.4434E-05 659.294191281459 663.301492232944 22.645 0.41075 22.645 22.412 22.823 0 77 17 7 0 0 0 0.0018633 2 8573 66.568 66.568 1 1.2045 1.224 0 12683000 5648500 7034300 25496 878 9632 9892 39906;39907 39906 687;688 MVIITGPPEAQFK 13 1 0 Oxidation (M) _M(ox)VIITGPPEAQFK_ M(1)VIITGPPEAQFK M(52.79)VIITGPPEAQFK 0 1 0 O00425;B4DKT5;Q9NZI8;D3DTW3;F8W930;Q9Y6M1 O00425;Q9NZI8;F8W930 O00425 IGF2BP3;IGF2BP1;IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 1;Insulin-like growth factor 2 mRNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.8943 2 723.886695 1445.75884 71515.96 0.89561 0.00064832 -0.70281 -0.00050875 0.1928 0.00013956 723.885858246106 727.893544873967 84.479 0.50014 84.479 84.213 84.713 0 101 37 5 0 0 0 0.0012962 2 50663 52.79 44.97 1 3.3829 3.4688 0 28547000 5807500 22739000 25497 1364;2087;1267 9633 9893 39908;39909 39908 973 MVIITGPPEAQFK 13 1 0 Unmodified _MVIITGPPEAQFK_ 0 0 0 O00425;B4DKT5;Q9NZI8;D3DTW3;F8W930;Q9Y6M1 O00425;Q9NZI8;F8W930 O00425 IGF2BP3;IGF2BP1;IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 1;Insulin-like growth factor 2 mRNA-binding protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 719.8969 2 715.889238 1429.76392 NaN NaN NaN 0.04861 3.48E-05 NaN NaN NaN NaN 110.03 0.50874 110.03 109.66 110.17 0 0 0 0 0.013609 1 63422 51.268 33.403 1 NaN NaN 0 1017700 0 1017700 25498 1364;2087;1267 9633 9894 39910 39910 MVIITGPPEAQFK 13 1 0 Unmodified _MVIITGPPEAQFK_ 0 0 0 O00425;B4DKT5;Q9NZI8;D3DTW3;F8W930;Q9Y6M1 O00425;Q9NZI8;F8W930 O00425 IGF2BP3;IGF2BP1;IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 1;Insulin-like growth factor 2 mRNA-binding protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.8965 2 715.889238 1429.76392 NaN NaN NaN -0.37305 -0.00026706 NaN NaN NaN NaN 109.83 0.36713 109.83 109.63 110 0 0 0 0 0.040494 1 62361 41.283 22.972 1 NaN NaN 0 1207400 0 1207400 25499 1364;2087;1267 9633 9894 39911 39911 MVINHLEK 8 1 0 Oxidation (M) _M(ox)VINHLEK_ M(1)VINHLEK M(71.49)VINHLEK 0 1 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.2755 2 500.268227 998.521901 NaN NaN NaN 0.17337 8.6732E-05 NaN NaN NaN NaN 20.735 0.22971 20.735 20.599 20.829 0 0 0 0 0.0042901 1 7013 71.491 28.576 1 NaN NaN 0 11545000 0 11545000 25500 1592 9634 9895 39912 39912 1375 MVIPALIQSDSGDSIEVSR 19 0 1 Oxidation (M) _M(ox)VIPALIQSDSGDSIEVSR_ M(1)VIPALIQSDSGDSIEVSR M(113.65)VIPALIQSDSGDSIEVSR 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1017.0151 2 1017.01461 2032.01467 59938.07 0.44923 0.00045687 -0.11157 -0.00011347 0.33766 0.0003434 1017.51550708127 1022.01822596866 103.55 0.62811 103.55 103.29 103.92 0 269 51 8 0 0 0 7.352E-17 3 63905 113.65 113.65 1 1.4202 1.4602 0 36462000 12733000 23729000 25501 897 9635 9896 39913;39914;39915 39913 715 MVIPALIQSDSGDSIEVSR 19 0 1 Oxidation (M) _M(ox)VIPALIQSDSGDSIEVSR_ M(1)VIPALIQSDSGDSIEVSR M(136.99)VIPALIQSDSGDSIEVSR 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1022.5208 2 1017.01461 2032.01467 60585.39 0.42591 0.00043316 0.017831 1.8135E-05 0.44374 0.00045129 1017.51612402494 1022.01804793084 103.01 0.64748 103.01 102.68 103.33 -7.6294E-06 279 51 8 0 0 0 9.003E-24 4 65071 136.99 136.99 1 1.426 1.5571 0 38877000 17503000 21373000 25502 897 9635 9896 39916;39917;39918;39919 39918 715 MVIPALIQSDSGDSIEVSR 19 0 1 Oxidation (M) _M(ox)VIPALIQSDSGDSIEVSR_ M(1)VIPALIQSDSGDSIEVSR M(130.2)VIPALIQSDSGDSIEVSR 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1022.5219 2 1017.01461 2032.01467 59682.59 0.71195 0.00072406 -0.25719 -0.00026156 0.45476 0.0004625 1017.51598147509 1022.01851303765 115.36 0.57581 115.36 115.1 115.67 0 168 27 9 0 0 0 7.2999E-23 3 67568 130.2 130.2 1 1.075 0.87785 0 15710000 7992500 7717600 25503 897 9635 9896 39920;39921;39922 39922 715 MVIPALIQSDSGDSIEVSR 19 0 1 Oxidation (M) _M(ox)VIPALIQSDSGDSIEVSR_ M(1)VIPALIQSDSGDSIEVSR M(61.11)VIPALIQSDSGDSIEVSR 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1017.5156 2 1017.01461 2032.01467 60236.01 0.49235 0.00050072 -0.033971 -3.4549E-05 0.45837 0.00046617 1017.014268498 1022.01846195037 124.55 0.48426 124.55 124.24 124.72 7.6294E-06 80 20 6 0 0 0 1.0296E-05 1 74643 61.11 61.11 1 1.348 1.1321 0 4278500 1766700 2511800 25504 897 9635 9896 39923 39923 715 MVIPALIQSDSGDSIEVSR 19 0 1 Oxidation (M) _M(ox)VIPALIQSDSGDSIEVSR_ M(1)VIPALIQSDSGDSIEVSR M(103.85)VIPALIQSDSGDSIEVSR 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1022.0197 2 1017.01461 2032.01467 60008.21 0.39422 0.00040093 -0.042426 -4.3148E-05 0.35179 0.00035778 1017.51628926269 1022.52031835003 115.23 0.5553 115.23 114.96 115.52 0 176 26 10 0 0 0 2.9672E-12 2 66585 103.85 103.85 1 1.1929 1.0019 0 17022000 8441800 8580400 25505 897 9635 9896 39924;39925 39925 715 MVIPALIQSDSGDSIEVSR 19 0 1 Unmodified _MVIPALIQSDSGDSIEVSR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1014.5247 2 1009.01715 2016.01976 NaN NaN NaN 1.465 0.0014782 NaN NaN NaN NaN 113.39 0.48223 113.39 113.26 113.75 0 0 0 0 7.9315E-07 2 71725 78.486 64.133 1 NaN NaN 0 5733500 0 5733500 25506 897 9635 9897 39926;39927 39927 MVIPALIQSDSGDSIEVSR 19 0 1 Unmodified _MVIPALIQSDSGDSIEVSR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1014.0208 2 1009.01715 2016.01976 NaN NaN NaN 0.051933 5.2401E-05 NaN NaN NaN NaN 112.83 0.20111 112.83 112.7 112.9 0 0 0 0 4.8853E-06 1 73017 68.44 59.252 1 NaN NaN 0 4844200 0 4844200 25507 897 9635 9897 39928 39928 MVIPALIQSDSGDSIEVSR 19 0 1 Unmodified _MVIPALIQSDSGDSIEVSR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1009.0182 2 1009.01715 2016.01976 59747.76 0.46446 0.00046865 0.58455 0.00058983 1.049 0.0010585 1009.01848491445 1014.02235466017 124.58 0.78525 124.58 124.29 125.07 0 168 34 10 0 0 0 0.00059632 1 74676 37.998 37.998 1 1.2997 1.0649 0 16625000 7096700 9528300 25508 897 9635 9897 39929 39929 MVIPALIQSDSGDSIEVSR 19 0 1 Unmodified _MVIPALIQSDSGDSIEVSR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1009.5198 2 1009.01715 2016.01976 60635.45 0.38514 0.00038861 0.57147 0.00057662 0.95661 0.00096523 1009.5194689037 1014.02217824197 124.43 0.69342 124.43 124.08 124.77 -7.6294E-06 170 30 8 0 0 0 8.46E-06 2 73713 75.462 75.462 1 1.2862 1.0812 0 17151000 7238300 9913100 25509 897 9635 9897 39930;39931 39930 MVLDHLVIQR 10 0 1 Oxidation (M) _M(ox)VLDHLVIQR_ M(1)VLDHLVIQR M(51.19)VLDHLVIQR 0 1 0 O14646;A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 O14646;A0A024RC75 O14646 CHD1;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.3524 2 620.34754 1238.68053 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.471 1 66.471 65.971 66.971 0 0 0 0 0.012814 1 38345 51.193 34.86 1 25510 1366;354 9636 9898 39932 39932 265 MVLLFEILR 9 0 1 Oxidation (M) _M(ox)VLLFEILR_ M(1)VLLFEILR M(71.5)VLLFEILR 0 1 0 A4LAA3;P46100;B4DHH8;B4DLE1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.2949 2 575.338652 1148.66275 81059.06 0.92014 0.00052939 -0.27433 -0.00015783 0.6458 0.00037156 575.338449234259 580.342602985186 125.29 0.62989 125.29 124.98 125.61 -7.6294E-06 151 40 5 0 0 0 0.001722 3 81284 71.501 63.561 1 1.1905 1.2385 0 5372300 2683600 2688700 25511 672 9637 9899 39933;39934;39935 39934 524 MVLLFEILR 9 0 1 Oxidation (M) _M(ox)VLLFEILR_ M(1)VLLFEILR M(83.26)VLLFEILR 0 1 0 A4LAA3;P46100;B4DHH8;B4DLE1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.3386 2 575.338652 1148.66275 81402.59 1.0945 0.00062973 -0.24644 -0.00014179 0.84809 0.00048794 575.338485044024 580.342711634548 124.71 0.61542 124.71 124.44 125.05 0 171 42 6 0 0 0 0.00077644 2 82887 83.265 73.278 1 1.0826 1.0887 0 6604500 3353900 3250600 25512 672 9637 9899 39936;39937 39937 524 MVLNESLK 8 1 0 Oxidation (M) _M(ox)VLNESLK_ M(1)VLNESLK M(62.46)VLNESLK 0 1 0 Q6PJJ2;P56182;B4DZM3;Q53FR7 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.2611 2 475.254785 948.495018 89992.63 0.53807 0.00025572 0.16277 7.7357E-05 0.70083 0.00033308 475.254973944857 479.26171673494 38.039 0.56506 38.039 37.728 38.293 3.8147E-06 183 47 5 0 0 0 0.007109 2 19367 62.464 45.537 1 1.5154 1.673 0 56664000 23298000 33366000 25513 1618 9638 9900 39938;39939 39938 1405 MVLNESLK 8 1 0 Oxidation (M) _M(ox)VLNESLK_ M(1)VLNESLK M(62)VLNESLK 0 1 0 Q6PJJ2;P56182;B4DZM3;Q53FR7 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.2549 2 475.254785 948.495018 88725.65 0.19128 9.0907E-05 0.15765 7.4923E-05 0.34893 0.00016583 475.254822853554 479.261811474167 37.162 0.60743 37.162 36.841 37.448 0 184 50 6 0 0 0 0.0072986 1 19197 61.999 36.549 1 1.2799 1.4255 0 51514000 20925000 30589000 25514 1618 9638 9900 39940 39940 1405 MVMIQDGPLPTGADK 15 1 0 2 Oxidation (M) _M(ox)VM(ox)IQDGPLPTGADK_ M(1)VM(1)IQDGPLPTGADK M(69.67)VM(69.67)IQDGPLPTGADK 0 2 0 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.377 2 802.886566 1603.75858 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.228 1 66.228 65.728 66.728 0 0 0 0 0.0013145 1 39124 69.672 63.012 1 25515 245 9639 9901 39941 39941 183;184 MVMIQDGPLPTGADK 15 1 0 2 Oxidation (M) _M(ox)VM(ox)IQDGPLPTGADK_ M(1)VM(1)IQDGPLPTGADK M(51.29)VM(51.29)IQDGPLPTGADK 0 2 0 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.3776 2 802.886566 1603.75858 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.238 1 66.238 65.738 66.738 0 0 0 0 0.0055234 1 39130 51.286 43.482 1 25516 245 9639 9901 39942 39942 183;184 MVNHFIAEFK 10 1 0 Oxidation (M) _M(ox)VNHFIAEFK_ M(1)VNHFIAEFK M(114.4)VNHFIAEFK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.3199 2 626.313166 1250.61178 77756.11 0.48527 0.00030393 -0.288 -0.00018038 0.19727 0.00012355 626.313132260371 630.320068462263 59.236 0.45797 59.236 59.018 59.476 0 209 31 10 0 0 0 2.7669E-08 2 33746 114.4 86.659 1 1.934 2.1843 0 107600000 33595000 74008000 25517 1467;1248 9640 9902 39943;39944 39944 957 MVNHFIAEFK 10 1 0 Oxidation (M) _M(ox)VNHFIAEFK_ M(1)VNHFIAEFK M(48.03)VNHFIAEFK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.8779 3 417.877869 1250.61178 92271.14 0.10243 4.2801E-05 -0.34244 -0.0001431 -0.24002 -0.0001003 417.877695053238 420.549085263095 59.259 0.59799 59.259 59.059 59.657 0 190 45 8 0 0 0 0.0043091 1 33724 48.028 40.628 1 1.7261 1.9394 0 69411000 25151000 44260000 25518 1467;1248 9640 9902 39945 39945 957 MVNHFIAEFK 10 1 0 Oxidation (M) _M(ox)VNHFIAEFK_ M(1)VNHFIAEFK M(159.83)VNHFIAEFK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.3201 2 626.313166 1250.61178 75784.34 0.66731 0.00041795 -0.026245 -1.6438E-05 0.64107 0.00040151 626.313226318502 630.320109401332 57.664 0.63531 57.664 57.432 58.068 0 290 52 9 0 0 0 6.9133E-17 2 33344 159.83 131.43 1 1.7022 1.915 0 120420000 44542000 75880000 25519 1467;1248 9640 9902 39946;39947 39947 957 MVNHFIAEFK 10 1 0 Oxidation (M) _M(ox)VNHFIAEFK_ M(1)VNHFIAEFK M(66.92)VNHFIAEFK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8149 2 626.313166 1250.61178 NaN NaN NaN 0.1413 8.8496E-05 NaN NaN NaN NaN 68.898 0.48744 68.898 68.661 69.148 0 0 0 0 0.0020329 1 36001 66.92 42.699 1 NaN NaN 0 2528000 2528000 0 25520 1467;1248 9640 9902 39948 39948 957 MVPAGMGAGLER 12 0 1 2 Oxidation (M) _M(ox)VPAGM(ox)GAGLER_ M(1)VPAGM(1)GAGLER M(69.35)VPAGM(69.35)GAGLER 0 2 0 M0QZM1;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 M0QZM1;P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.7961 2 610.79174 1219.56893 NaN NaN NaN 0.06472 3.953E-05 NaN NaN NaN NaN 28.157 0.43744 28.157 28.025 28.463 0 0 0 0 0.00041684 1 13424 69.346 44.423 1 NaN NaN 0 81835000 0 81835000 25521 1599;1354 9641 9903 39949 39949 1022;1023 MVPFQVPEILR 11 0 1 Oxidation (M) _M(ox)VPFQVPEILR_ M(1)VPFQVPEILR M(54.98)VPFQVPEILR 0 1 0 H7BXY3;A0A024R2T6;Q7L2E3;Q6W6M7 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.8754 2 672.870848 1343.72714 75907.97 1.0527 0.0007083 -0.58365 -0.00039272 0.46901 0.00031558 672.87056954615 677.874657428514 115.75 0.63653 115.75 115.38 116.01 7.6294E-06 200 41 8 0 0 0 0.0029652 3 73612 54.982 43.817 1 1.4981 1.5677 0 12840000 4889900 7949700 25522 122 9642 9904 39950;39951;39952 39950 107 MVPFQVPEILR 11 0 1 Oxidation (M) _M(ox)VPFQVPEILR_ M(1)VPFQVPEILR M(46.46)VPFQVPEILR 0 1 0 H7BXY3;A0A024R2T6;Q7L2E3;Q6W6M7 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8768 2 672.870848 1343.72714 76074.73 0.72909 0.00049058 -0.039514 -2.6588E-05 0.68958 0.000464 672.870695835172 677.874785683906 115.03 0.74905 115.03 114.67 115.42 0 218 48 9 0 0 0 0.0073526 1 74903 46.462 36.175 1 1.3664 1.3671 0 11421000 5221100 6199900 25523 122 9642 9904 39953 39953 107 MVQQLQEDVDMEDAP 15 0 0 2 Oxidation (M) _M(ox)VQQLQEDVDM(ox)EDAP_ M(1)VQQLQEDVDM(1)EDAP M(48.98)VQQLQEDVDM(48.98)EDAP 0 2 0 B3KP47;A0A024R5U8;Q9UHA3 B3KP47 B3KP47 C15orf15;RSL24D1 Probable ribosome biogenesis protein RLP24 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 890.373 2 890.374217 1778.73388 NaN NaN NaN 0.10961 9.7591E-05 NaN NaN NaN NaN 72.409 0.56262 72.409 72.018 72.581 0 0 0 0 0.0023427 1 42199 48.981 46.468 1 25524 188 9643 9905 39954 39954 154;155 MVSDEYEQLSSEALEAAR 18 0 1 Oxidation (M) _M(ox)VSDEYEQLSSEALEAAR_ M(1)VSDEYEQLSSEALEAAR M(43.59)VSDEYEQLSSEALEAAR 0 1 0 F8W7C6 F8W7C6 F8W7C6 RPL10 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1022.4627 2 1022.46241 2042.91026 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.42 1 113.42 112.92 113.92 0 0 0 0 0.0063358 1 66078 43.594 37.749 1 25525 1266 9644 9906 39955 39955 971 MVSDEYEQLSSEALEAAR 18 0 1 Oxidation (M) _M(ox)VSDEYEQLSSEALEAAR_ M(1)VSDEYEQLSSEALEAAR M(45.28)VSDEYEQLSSEALEAAR 0 1 0 F8W7C6 F8W7C6 F8W7C6 RPL10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1022.463 2 1022.46241 2042.91026 60193.14 0.39577 0.00040466 -0.16687 -0.00017062 0.2289 0.00023404 1023.46521207381 1027.46770459 113.49 0.48296 113.49 113.22 113.71 0 102 23 6 0 0 0 0.00020598 1 65146 45.28 45.28 1 0.95937 0.8457 0 4111800 2266100 1845800 25526 1266 9644 9906 39956 39956 971 MVSDEYEQLSSEALEAAR 18 0 1 Unmodified _MVSDEYEQLSSEALEAAR_ 0 0 0 F8W7C6 F8W7C6 F8W7C6 RPL10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1019.9692 2 1014.46495 2026.91535 58400.2 0.47764 0.00048455 -0.49293 -0.00050006 -0.015293 -1.5514E-05 1014.96559035075 1019.97061608434 116.51 0.41896 116.51 116.28 116.7 0 83 18 7 0 0 0 0.00089503 1 67509 39.509 39.459 1 1.0664 0.89371 0 4882300 2131300 2751000 25527 1266 9644 9907 39957 39957 MVSEEMEEQVHSIR 14 0 1 2 Oxidation (M) _M(ox)VSEEM(ox)EEQVHSIR_ M(1)VSEEM(1)EEQVHSIR M(46.73)VSEEM(46.73)EEQVHSIR 0 2 0 A8K3S3;A0A140VKF1;Q99661;B7Z7M6;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.8915 2 868.384919 1734.75528 66560.61 0.43076 0.00037407 -0.94983 -0.00082482 -0.51907 -0.00045075 868.8853351405 873.890268264729 26.695 0.1238 26.695 26.599 26.723 0 15 6 4 0 0 0 0.0044 1 12059 46.73 41.416 1 0.52063 0.51737 0 8200500 5998200 2202300 25528 626 9645 9908 39958 39958 485;486 MVSEEMEEQVHSIR 14 0 1 2 Oxidation (M) _M(ox)VSEEM(ox)EEQVHSIR_ M(1)VSEEM(1)EEQVHSIR M(72.65)VSEEM(72.65)EEQVHSIR 0 2 0 A8K3S3;A0A140VKF1;Q99661;B7Z7M6;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.3895 2 868.384919 1734.75528 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.443 1 26.443 25.943 26.943 0 0 0 0 0.0011835 1 11864 72.652 63.648 1 25529 626 9645 9908 39959 39959 485;486 MVSEEMEEQVHSIR 14 0 1 2 Oxidation (M) _M(ox)VSEEM(ox)EEQVHSIR_ M(1)VSEEM(1)EEQVHSIR M(43.51)VSEEM(43.51)EEQVHSIR 0 2 0 A8K3S3;A0A140VKF1;Q99661;B7Z7M6;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.3914 2 868.384919 1734.75528 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.048 1 26.048 25.548 26.548 -1.9073E-06 0 0 0 0.02192 1 11544 43.512 31.646 1 25530 626 9645 9908 39960 39960 485;486 MVSSYVGENAEFER 14 0 1 Oxidation (M) _M(ox)VSSYVGENAEFER_ M(1)VSSYVGENAEFER M(55.4)VSSYVGENAEFER 0 1 0 Q6IAV5;A0A024R040;P55809;A1E286 Q6IAV5 Q6IAV5 OXCT;OXCT1 Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.3975 2 817.36177 1632.70899 NaN NaN NaN 2.9421 0.0024048 NaN NaN NaN NaN 59.032 0.23227 59.032 58.941 59.173 0 0 0 0 0.0016722 2 33657 55.401 38.769 1 NaN NaN 0 2080500 0 2080500 25531 35 9646 9909 39961;39962 39962 20 MVSSYVGENAEFER 14 0 1 Oxidation (M) _M(ox)VSSYVGENAEFER_ M(1)VSSYVGENAEFER M(40.5)VSSYVGENAEFER 0 1 0 Q6IAV5;A0A024R040;P55809;A1E286 Q6IAV5 Q6IAV5 OXCT;OXCT1 Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.3683 2 817.36177 1632.70899 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.888 1 58.888 58.388 59.388 3.8147E-06 0 0 0 0.022663 1 33461 40.496 26.077 1 25532 35 9646 9909 39963 39963 20 MVVPAALK 8 1 0 Oxidation (M) _M(ox)VVPAALK_ M(1)VVPAALK M(81.38)VVPAALK 0 1 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.7519 2 422.751682 843.48881 93208.12 0.27952 0.00011817 0.36395 0.00015386 0.64347 0.00027203 422.751875730244 426.758869059799 44.44 1.0093 44.44 43.987 44.996 0 400 85 8 0 0 0 0.0037788 1 24173 81.381 58.344 1 1.1607 1.3485 0 230290000 110110000 120180000 25533 1558 9647 9910 39964 39964 1309 MVVPGLDGAQIPR 13 0 1 Oxidation (M) _M(ox)VVPGLDGAQIPR_ M(1)VVPGLDGAQIPR M(43.51)VVPGLDGAQIPR 0 1 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.871 2 684.868837 1367.72312 NaN NaN NaN -0.77681 -0.00053201 NaN NaN NaN NaN 85.661 0.37425 85.661 85.427 85.801 0 0 0 0 0.0088783 1 51379 43.512 26.076 1 NaN NaN 0 6045200 6045200 0 25534 587 9648 9911 39965 39965 439 MVVPGLDGAQIPR 13 0 1 Oxidation (M) _M(ox)VVPGLDGAQIPR_ M(1)VVPGLDGAQIPR M(51.09)VVPGLDGAQIPR 0 1 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8733 2 684.868837 1367.72312 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.467 1 85.467 84.967 85.967 0 0 0 0 0.0067495 1 51355 51.092 30.19 1 25535 587 9648 9911 39966 39966 439 MVVPGLDGAQIPR 13 0 1 Oxidation (M) _M(ox)VVPGLDGAQIPR_ M(1)VVPGLDGAQIPR M(61.35)VVPGLDGAQIPR 0 1 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8743 2 684.868837 1367.72312 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.762 1 84.762 84.262 85.262 0 0 0 0 0.0019192 1 52087 61.353 38.774 1 25536 587 9648 9911 39967 39967 439 MYAALGDPK 9 1 0 Oxidation (M) _M(ox)YAALGDPK_ M(1)YAALGDPK M(50.04)YAALGDPK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2474 2 491.239135 980.463718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.492 1 32.492 31.992 32.992 0 0 0 0 0.017993 1 16118 50.04 29.056 1 25537 1665 9649 9912 39968 39968 1458 MYEEHLK 7 1 0 Oxidation (M) _M(ox)YEEHLK_ M(1)YEEHLK M(81.32)YEEHLK 0 1 0 A0A024R6D4;P84090;G3V279 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.2307 2 483.223485 964.432418 86208.64 -0.063444 -3.0658E-05 0.53457 0.00025832 0.47113 0.00022766 483.223710580023 487.230706156922 17.767 0.25199 17.767 17.617 17.869 0 31 7 6 0 0 0 0.013018 1 4874 81.32 43.712 1 1.099 1.1831 0 33391000 15861000 17530000 25538 201 9650 9913 39969 39969 159 MYEEHLK 7 1 0 Oxidation (M) _M(ox)YEEHLK_ M(1)YEEHLK M(81.61)YEEHLK 0 1 0 A0A024R6D4;P84090;G3V279 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.2238 2 483.223485 964.432418 NaN NaN NaN 0.20314 9.8164E-05 NaN NaN NaN NaN 17.539 0.19622 17.539 17.421 17.617 0 0 0 0 0.010141 1 4691 81.613 27.903 1 NaN NaN 0 12080000 12080000 0 25539 201 9650 9913 39970 39970 159 MYSDAFLNDSYLK 13 1 0 Oxidation (M) _M(ox)YSDAFLNDSYLK_ M(1)YSDAFLNDSYLK M(47.84)YSDAFLNDSYLK 0 1 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;Q6AI02;Q4LE48;Q8WVM7;Q68DW7;B1AMT4 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2;DKFZp686P168;STAG1 variant protein;STAG1;DKFZp781D1416 Cohesin subunit SA-2;Cohesin subunit SA-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.865 2 791.858331 1581.70211 NaN NaN NaN 0.20437 0.00016183 NaN NaN NaN NaN 95.543 0.34256 95.543 95.452 95.794 0 0 0 0 0.0062867 1 58148 47.844 41.603 1 NaN NaN 0 3912900 0 3912900 25540 863 9651 9914 39971 39971 675 MYSEIDIK 8 1 0 Oxidation (M) _M(ox)YSEIDIK_ M(1)YSEIDIK M(54.78)YSEIDIK 0 1 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7516 2 507.74425 1013.47395 87085.36 0.70649 0.00035872 -0.30031 -0.00015248 0.40618 0.00020623 507.744292902849 511.75114795811 47.423 0.52813 47.423 47.051 47.58 0 94 37 5 0 0 0 0.012646 1 26325 54.776 27.252 1 1.2219 1.2197 0 14926000 7621400 7304600 25541 794 9652 9915 39972 39972 638 MYSTDDGVQFHAFGR 15 0 1 Oxidation (M) _M(ox)YSTDDGVQFHAFGR_ M(1)YSTDDGVQFHAFGR M(45.79)YSTDDGVQFHAFGR 0 1 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.2575 3 582.922866 1745.74677 81716.95 0.33431 0.00019488 0.17548 0.00010229 0.50979 0.00029717 583.257272686636 586.593528015252 68.483 0.62644 68.483 68.153 68.78 0 117 53 4 0 0 0 0.00053974 1 39778 45.79 45.79 1 0.99079 1.0304 0 10458000 5294800 5163400 25542 794 9653 9916 39973 39973 639 MYSYPAR 7 0 1 Oxidation (M) _M(ox)YSYPAR_ M(1)YSYPAR M(113.08)YSYPAR 0 1 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.2047 2 452.205096 902.395638 89737.22 0.19084 8.6299E-05 0.74848 0.00033847 0.93932 0.00042476 452.205073859923 457.209371138036 24.023 0.51474 24.023 23.849 24.364 0 126 24 9 0 0 0 0.0047956 2 9794 113.08 94.278 1 1.3132 1.4949 0 115170000 48199000 66969000 25543 837;781 9654 9917 39974;39975 39974 614 MYSYPAR 7 0 1 Oxidation (M) _M(ox)YSYPAR_ M(1)YSYPAR M(76.85)YSYPAR 0 1 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.2093 2 452.205096 902.395638 89550.44 -0.018337 -8.292E-06 -0.34915 -0.00015789 -0.36748 -0.00016618 452.204344893717 457.209187981061 24.293 0.49843 24.293 24.095 24.594 0 79 21 6 0 0 0 0.012941 1 10028 76.847 67.606 1 1.5036 1.7497 0 61724000 24524000 37201000 25544 837;781 9654 9917 39976 39976 614 MYSYPAR 7 0 1 Oxidation (M) _M(ox)YSYPAR_ M(1)YSYPAR M(76.85)YSYPAR 0 1 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 452.2048 2 452.205096 902.395638 90188.79 0.073079 3.3047E-05 0.38825 0.00017557 0.46133 0.00020861 452.205091210208 457.209286637279 26.664 0.54055 26.664 26.463 27.004 1.9073E-06 90 26 7 0 0 0 0.012941 1 10149 76.847 67.606 1 0.41712 0.35906 0 7293800 5219900 2073800 25545 837;781 9654 9917 39977 39977 614 MYSYPAR 7 0 1 Unmodified _MYSYPAR_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 444.2075 2 444.207638 886.400723 92231.08 0.12431 5.5217E-05 -0.099308 -4.4114E-05 0.024997 1.1104E-05 444.207472564211 449.211707075864 34.234 0.59283 34.234 34.038 34.631 0 164 47 4 0 0 0 0.043094 1 14586 58.246 43.833 1 0.66078 0.56996 0 2742600 1722100 1020500 25546 837;781 9654 9918 39978 39978 MYVPALIFGQLLTSSNYDDDEKK 23 2 0 Oxidation (M) _M(ox)YVPALIFGQLLTSSNYDDDEKK_ M(1)YVPALIFGQLLTSSNYDDDEKK M(48.23)YVPALIFGQLLTSSNYDDDEKK 0 1 1 P11388;J3KTB7 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.1104 3 888.435155 2662.28363 64213.57 0.8801 0.00078191 -0.081597 -7.2493E-05 0.7985 0.00070942 888.76940274009 894.112410122243 126.07 0.8446 126.07 125.75 126.59 0 324 63 9 0 0 0 1.7273E-06 1 81867 48.229 48.229 1 1.0895 1.2999 0 20178000 10203000 9975000 25547 1471 9655 9919 39979 39979 1207 MYVPALIFGQLLTSSNYDDDEKK 23 2 0 Oxidation (M) _M(ox)YVPALIFGQLLTSSNYDDDEKK_ M(1)YVPALIFGQLLTSSNYDDDEKK M(48.66)YVPALIFGQLLTSSNYDDDEKK 0 1 1 P11388;J3KTB7 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.7784 3 888.435155 2662.28363 64146.17 0.79164 0.00070332 0.24278 0.0002157 1.0344 0.00091902 888.769896837892 894.112587758448 125.59 0.59949 125.59 125.33 125.93 0 312 40 10 0 0 0 1.1874E-06 1 83554 48.656 48.656 1 1.1147 1.28 0 22662000 10375000 12287000 25548 1471 9655 9919 39980 39980 1207 NAADPISGDFK 11 1 0 Unmodified _NAADPISGDFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.782 2 567.774928 1133.5353 80292.79 0.70889 0.00040249 0.2886 0.00016386 0.99749 0.00056635 567.775091836944 571.782083860631 55.402 0.93937 55.402 54.938 55.878 0 429 83 8 0 0 0 6.4195E-13 2 31046 147.75 125.17 1 1.8094 2.0391 0 126800000 46318000 80480000 25549 1569 9656 9920 39981;39982 39981 NAADPISGDFK 11 1 0 Unmodified _NAADPISGDFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.7824 2 567.774928 1133.5353 80252.79 0.79484 0.00045129 -0.015972 -9.0687E-06 0.77887 0.00044222 567.774952771123 571.781875110112 54.428 0.92155 54.428 53.993 54.914 0 339 79 7 0 0 0 1.548E-10 2 31026 135.55 130.2 1 1.7993 2.0114 0 103070000 36233000 66835000 25550 1569 9656 9920 39983;39984 39984 NAADPISGDFK 11 1 0 Unmodified _NAADPISGDFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.7825 2 567.774928 1133.5353 80091.63 0.31358 0.00017804 0.12283 6.9739E-05 0.4364 0.00024778 567.774923051364 571.782029142859 64.018 1.4224 64.018 63.53 64.953 0 508 111 7 0 0 0 0.00019325 2 32837 93.096 89.84 1 3.5114 2.815 0 21067000 4690500 16376000 25551 1569 9656 9920 39985;39986 39985 NAADPISGDFK 11 1 0 Unmodified _NAADPISGDFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.7822 2 567.774928 1133.5353 80449.44 0.24143 0.00013708 0.26496 0.00015044 0.50638 0.00028751 567.775085400889 571.782064026134 64.538 1.2402 64.538 64.098 65.338 0 498 100 8 0 0 0 0.0012067 2 32431 69.275 69.275 1 3.7708 3.0295 0 17268000 3900500 13368000 25552 1569 9656 9920 39987;39988 39987 NAAEELKPR 9 1 1 Unmodified _NAAEELKPR_ 0 0 1 Q5J8M4;P78406 Q5J8M4 Q5J8M4 RAE1 mRNA export factor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2916 2 514.28018 1026.54581 NaN NaN NaN 0.74339 0.00038231 NaN NaN NaN NaN 19.773 0.19888 19.773 19.689 19.888 0 0 0 0 0.0020899 1 6131 94.692 45.25 1 NaN NaN 0 16369000 0 16369000 25553 1664 9657 9921 39989 39989 NAAPPPSNTEAPPGETR 17 0 1 Unmodified _NAAPPPSNTEAPPGETR_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.411 2 853.41064 1704.80673 69417.97 0.66969 0.00057152 -0.14256 -0.00012167 0.52713 0.00044985 853.911726841442 858.41477314008 25.837 0.26729 25.837 25.763 26.031 0 33 13 4 0 0 0 0.001476 2 11352 40.577 39.525 1 0.72602 0.75776 0 4937700 3163800 1773900 25554 993 9658 9922 39990;39991 39990 NAAQFLLSTNDK 12 1 0 Unmodified _NAAQFLLSTNDK_ 0 0 0 Q56VW8;A0A140VJT0;P63151 Q56VW8 Q56VW8 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.3489 2 661.340966 1320.66738 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.004 1 75.004 74.504 75.504 0 0 0 0 1.4382E-06 1 45175 97.456 57.105 1 25555 609 9659 9923 39992 39992 NACIECSVNQNSIR 14 0 1 Unmodified _NACIECSVNQNSIR_ 0 0 0 Q9UBB4;Q7Z524 Q9UBB4 Q9UBB4 ATXN10 Ataxin-10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.8832 2 832.877595 1663.74064 NaN NaN NaN -0.3502 -0.00029167 NaN NaN NaN NaN 46.535 0.16174 46.535 46.46 46.622 0 0 0 0 0.011671 1 25104 50.95 42.725 1 NaN NaN 0 4265500 0 4265500 25556 2095 9660 9924 39993 39993 NACIECSVNQNSIR 14 0 1 Unmodified _NACIECSVNQNSIR_ 0 0 0 Q9UBB4;Q7Z524 Q9UBB4 Q9UBB4 ATXN10 Ataxin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.8822 2 832.877595 1663.74064 69829.34 0.85805 0.00071465 0.79447 0.0006617 1.6525 0.0013764 832.878259846926 837.882187851824 45.541 0.24525 45.541 45.402 45.647 0 35 21 4 0 0 0 0.00012135 1 24948 81.625 74.965 1 1.6002 1.6781 0 4184700 2122700 2062000 25557 2095 9660 9924 39994 39994 NADPILISLK 10 1 0 Unmodified _NADPILISLK_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.3312 2 542.324057 1082.63356 82414.8 0.77447 0.00042002 -0.26167 -0.00014191 0.5128 0.0002781 542.323635408311 546.330910275101 95.51 1.2599 95.51 94.787 96.047 0 390 103 7 0 0 0 0.0038105 2 57704 62.823 50.296 1 3.4787 3.7713 0 44616000 9507900 35108000 25558 340 9661 9925 39995;39996 39995 NADPILISLK 10 1 0 Unmodified _NADPILISLK_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.3313 2 542.324057 1082.63356 81812.62 0.78225 0.00042423 -0.23985 -0.00013008 0.5424 0.00029416 542.323717260397 546.330939655143 94.31 1.2048 94.31 93.904 95.108 -7.6294E-06 384 102 6 0 0 0 0.0059728 2 58442 59.426 44.561 1 3.4889 3.9313 0 59877000 14049000 45828000 25559 340 9661 9925 39997;39998 39997 NADPILISLK 10 1 0 Unmodified _NADPILISLK_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.3311 2 542.324057 1082.63356 81677.32 0.77636 0.00042104 -0.15863 -8.6028E-05 0.61774 0.00033501 542.32390019991 546.330958348837 108.58 1.0265 108.58 108.28 109.3 7.6294E-06 180 50 7 0 0 0 0.0038894 1 62324 62.463 54.817 1 7.516 5.8343 0 14486000 1690900 12795000 25560 340 9661 9925 39999 39999 NADPILISLK 10 1 0 Unmodified _NADPILISLK_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.3312 2 542.324057 1082.63356 81817.8 0.58547 0.00031751 -0.21199 -0.00011497 0.37347 0.00020254 542.32394173939 546.331036719513 108.36 0.79543 108.36 108.1 108.89 0 155 39 6 0 0 0 0.048481 1 61270 36.424 30.503 1 7.4644 6.1488 0 10627000 1579700 9047700 25561 340 9661 9925 40000 40000 NAEDVQHQILATESSNQEYVR 21 0 1 Unmodified _NAEDVQHQILATESSNQEYVR_ 0 0 0 Q05DM0;Q6NSC0;Q6PG44;B4DZK6;O75330 Q05DM0 Q05DM0 HMMR Hyaluronan mediated motility receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.3907 3 811.054325 2430.14114 69419.77 0.58549 0.00047486 0.022878 1.8555E-05 0.60836 0.00049342 811.389050758472 815.057859233812 72.166 0.35918 72.166 72.018 72.378 7.6294E-06 58 27 5 0 0 0 0.00043954 2 42224 34.221 34.221 1 0.30464 0.31499 0 6107900 3884500 2223400 25562 1057 9662 9926 40001;40002 40001 NAEDVQHQILATESSNQEYVR 21 0 1 Unmodified _NAEDVQHQILATESSNQEYVR_ 0 0 0 Q05DM0;Q6NSC0;Q6PG44;B4DZK6;O75330 Q05DM0 Q05DM0 HMMR Hyaluronan mediated motility receptor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.0544 3 811.054325 2430.14114 NaN NaN NaN -0.25622 -0.00020781 NaN NaN NaN NaN 71.055 0.27846 71.055 70.918 71.197 0 0 0 0 0.00015404 2 42527 45.992 40.735 1 NaN NaN 0 4684700 4684700 0 25563 1057 9662 9926 40003;40004 40004 NAEDVQHQILATESSNQEYVR 21 0 1 Unmodified _NAEDVQHQILATESSNQEYVR_ 0 0 0 Q05DM0;Q6NSC0;Q6PG44;B4DZK6;O75330 Q05DM0 Q05DM0 HMMR Hyaluronan mediated motility receptor MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.3875 3 811.054325 2430.14114 67022.98 0.51953 0.00042137 0.0084031 6.8153E-06 0.52793 0.00042818 811.387694189262 814.391030502415 82.857 0.38747 82.857 82.643 83.03 0 86 24 6 0 0 0 0.044958 1 45107 11.573 8.6069 1 1.0478 0.92306 0 1418200 732540 685670 25564 1057 9662 9926 40005 40005 NAENAIEALK 10 1 0 Unmodified _NAENAIEALK_ 0 0 0 A0A0S2Z3L2;P16615;H7C5W9;Q8N3X5;Q7Z675;Q7Z6E5;O14983;H3BVB2 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2;DKFZp779O2152;DKFZp779G2251;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.7932 2 536.785296 1071.55604 NaN NaN NaN 0.059478 3.1927E-05 NaN NaN NaN NaN 55.032 0.43839 55.032 54.844 55.283 -3.8147E-06 0 0 0 0.00035698 1 31514 91.867 56.571 1 NaN NaN 0 6962000 0 6962000 25565 554 9663 9927 40006 40006 NAENAIEALK 10 1 0 Unmodified _NAENAIEALK_ 0 0 0 A0A0S2Z3L2;P16615;H7C5W9;Q8N3X5;Q7Z675;Q7Z6E5;O14983;H3BVB2 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2;DKFZp779O2152;DKFZp779G2251;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.7839 2 536.785296 1071.55604 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.06 1 55.06 54.56 55.56 0 0 0 0 0.0078072 1 31521 60.398 25.103 1 25566 554 9663 9927 40007 40007 NAEPLINLDVNNPDFK 16 1 0 Unmodified _NAEPLINLDVNNPDFK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 910.9688 2 906.959965 1811.90538 63437.11 0.73881 0.00067007 0.46343 0.00042031 1.2022 0.0010904 907.461672237838 910.967951979079 107.75 0.49173 107.75 107.55 108.04 -7.6294E-06 210 35 8 0 0 0 1.576E-09 3 67116 111.79 100.89 1 1.1578 1.2458 0 40426000 18781000 21646000 25567 1793 9664 9928 40008;40009;40010 40010 NAEPLINLDVNNPDFK 16 1 0 Unmodified _NAEPLINLDVNNPDFK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 910.9705 2 906.959965 1811.90538 63347.71 0.82701 0.00075007 0.39848 0.00036141 1.2255 0.0011115 907.461692584455 910.96758059816 107.26 0.50807 107.26 106.97 107.47 0 174 31 8 0 0 0 7.246E-34 3 68380 157.5 149.09 1 1.1047 1.2407 0 55699000 26899000 28799000 25568 1793 9664 9928 40011;40012;40013 40013 NAEPLINLDVNNPDFK 16 1 0 Unmodified _NAEPLINLDVNNPDFK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 910.9681 2 906.959965 1811.90538 64461.04 0.70183 0.00063653 0.36502 0.00033106 1.0669 0.0009676 907.461715512792 910.967252193412 119.07 0.37408 119.07 118.86 119.23 0 90 16 8 0 0 0 8.2088E-05 2 70405 80.96 75.466 1 1.2974 1.0242 0 10730000 5340000 5390300 25569 1793 9664 9928 40014;40015 40014 NAEPLINLDVNNPDFK 16 1 0 Unmodified _NAEPLINLDVNNPDFK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 910.9683 2 906.959965 1811.90538 63855.55 0.64597 0.00058587 0.32247 0.00029247 0.96844 0.00087833 907.461876922635 911.468814325687 118.89 0.40265 118.89 118.68 119.09 0 95 17 8 0 0 0 1.1119E-06 2 69366 96.591 88.487 1 1.2358 1.0121 0 12517000 5439600 7077800 25570 1793 9664 9928 40016;40017 40017 NAEQAATQLK 10 1 0 Unmodified _NAEQAATQLK_ 0 0 0 A0A024R663;Q86UP2 A0A024R663 A0A024R663 KTN1 Kinectin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.2831 2 537.28292 1072.55129 NaN NaN NaN 0.71051 0.00038174 NaN NaN NaN NaN 26.594 0.3181 26.594 26.444 26.762 1.9073E-06 0 0 0 0.018622 1 10069 54.982 19.686 1 NaN NaN 0 1028100 1028100 0 25571 197 9665 9929 40018 40018 NAGNCLSPAVIVGLLK 16 1 0 Unmodified _NAGNCLSPAVIVGLLK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.456 2 813.455807 1624.89706 68356.58 0.91703 0.00074597 0.098257 7.9928E-05 1.0153 0.00082589 813.455848867675 817.46314639038 126.21 0.69575 126.21 125.95 126.64 0 295 53 9 0 0 0 8.3034E-09 2 82111 107.97 100.4 1 3.0479 3.2953 0 42796000 10972000 31824000 25572 1382 9666 9930 40019;40020 40020 NAGNCLSPAVIVGLLK 16 1 0 Unmodified _NAGNCLSPAVIVGLLK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.9592 2 813.455807 1624.89706 67168.65 0.945 0.00076871 -0.011759 -9.5657E-06 0.93324 0.00075915 813.45590680871 817.463092537681 125.77 0.72074 125.77 125.5 126.22 0 228 45 9 0 0 0 1.0349E-17 2 83774 133.07 133.07 1 3.0766 3.4219 0 50846000 12255000 38591000 25573 1382 9666 9930 40021;40022 40022 NAHLNALK 8 1 0 Unmodified _NAHLNALK_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.7532 2 440.753601 879.49265 89322.7 -0.14654 -6.4587E-05 0.021507 9.4794E-06 -0.12503 -5.5108E-05 440.753589999912 444.760581878602 20.597 0.71631 20.597 20.45 21.166 0 109 32 8 0 0 0 0.00060555 2 7023 130 85.309 1 0.87405 1.0154 0 249070000 126070000 123000000 25574 908 9667 9931 40023;40024 40024 NAHLNALK 8 1 0 Unmodified _NAHLNALK_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.7537 2 440.753601 879.49265 89612.32 -0.29102 -0.00012827 -0.35703 -0.00015736 -0.64805 -0.00028563 440.753752687978 444.760786510872 20.352 0.6572 20.352 20.133 20.791 0 99 21 9 0 0 0 3.0397E-14 2 6553 171.47 115.86 1 0.88355 1.0238 0 213090000 118640000 94455000 25575 908 9667 9931 40025;40026 40026 NAHLNALK 8 1 0 Unmodified _NAHLNALK_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 440.7535 2 440.753601 879.49265 87639.05 -0.40601 -0.00017895 0.19372 8.5383E-05 -0.21228 -9.3565E-05 440.753759701412 444.760691732198 21.709 0.77606 21.709 21.504 22.281 1.9073E-06 106 28 9 0 0 0 0.00019911 2 6662 135.6 81.394 1 1.5281 1.2791 0 50998000 20417000 30581000 25576 908 9667 9931 40027;40028 40028 NAHLNALK 8 1 0 Unmodified _NAHLNALK_ 0 0 0 B3KMS0;Q15021;B4E0B7;A0PJ76;F5GZK7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 444.7606 2 440.753601 879.49265 87843.71 -0.32955 -0.00014525 0.090724 3.9987E-05 -0.23882 -0.00010526 440.753784989528 444.760699530072 21.393 0.62263 21.393 21.208 21.83 0 129 25 9 0 0 0 0.0027401 2 6024 98.997 58.893 1 1.6069 1.3419 0 42848000 16203000 26645000 25577 908 9667 9931 40029;40030 40030 NAHSTAIAGLTFLHR 15 0 1 Unmodified _NAHSTAIAGLTFLHR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.9579 3 536.958351 1607.85322 81915.63 0.4899 0.00026305 -0.27685 -0.00014866 0.21305 0.0001144 536.958250663783 540.294164241451 84.319 0.52605 84.319 84.106 84.632 0 240 41 9 0 0 0 0.0020732 3 45939 36.345 36.345 1 1.2855 1.1059 0 49983000 21562000 28421000 25578 486 9668 9932 40031;40032;40033 40033 NAHSTAIAGLTFLHR 15 0 1 Unmodified _NAHSTAIAGLTFLHR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.2948 3 536.958351 1607.85322 82238.81 0.71159 0.00038209 -0.47947 -0.00025745 0.23212 0.00012464 536.95812562112 540.294063401288 83.999 0.50024 83.999 83.776 84.276 0 277 44 8 0 0 0 0.00015659 2 44974 55.975 55.975 1 1.2195 1.0638 0 30805000 14104000 16702000 25579 486 9668 9932 40034;40035 40035 NAIANASTLAEVER 14 0 1 Unmodified _NAIANASTLAEVER_ 0 0 0 Q53G61;Q53G21;P09661;H0YMA0;H0YLR3 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.8839 2 729.880987 1457.74742 NaN NaN NaN -0.05249 -3.8312E-05 NaN NaN NaN NaN 73.253 0.51048 73.253 72.972 73.482 0 0 0 0 4.8544E-06 1 42846 95.094 61.831 1 NaN NaN 0 7206600 0 7206600 25580 1461 9669 9933 40036 40036 NAIANASTLAEVER 14 0 1 Unmodified _NAIANASTLAEVER_ 0 0 0 Q53G61;Q53G21;P09661;H0YMA0;H0YLR3 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3868 2 729.880987 1457.74742 70357.79 0.43607 0.00031828 -0.45626 -0.00033302 -0.020192 -1.4738E-05 730.382182838128 734.885016550303 72.126 0.55575 72.126 71.8 72.356 0 126 50 4 0 0 0 4.8859E-21 1 43214 142.08 102.46 1 1.1571 1.1459 0 15540000 7242700 8296900 25581 1461 9669 9933 40037 40037 NAIANASTLAEVER 14 0 1 Unmodified _NAIANASTLAEVER_ 0 0 0 Q53G61;Q53G21;P09661;H0YMA0;H0YLR3 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 734.884 2 729.880987 1457.74742 NaN NaN NaN 1.1799 0.00086116 NaN NaN NaN NaN 84.347 0.40749 84.347 84.137 84.545 0 0 0 0 0.0094345 1 45963 52.463 33.718 1 NaN NaN 0 1773800 0 1773800 25582 1461 9669 9933 40038 40038 NAIANASTLAEVER 14 0 1 Unmodified _NAIANASTLAEVER_ 0 0 0 Q53G61;Q53G21;P09661;H0YMA0;H0YLR3 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.8854 2 729.880987 1457.74742 70580.11 0.76177 0.000556 -0.068315 -4.9862E-05 0.69345 0.00050614 730.381231216171 734.885185844417 84.49 0.44448 84.49 84.24 84.685 0 120 30 5 0 0 0 0.00023667 1 45283 64.121 47.868 1 1.3092 1.1487 0 2518900 1096300 1422600 25583 1461 9669 9933 40039 40039 NAIASDSEADSDTEVPK 17 1 0 Unmodified _NAIASDSEADSDTEVPK_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 878.9011 2 874.894685 1747.77482 NaN NaN NaN 0.21473 0.00018787 NaN NaN NaN NaN 41.513 0.28291 41.513 41.307 41.59 0 0 0 0 1.2932E-06 1 21857 81.494 66.522 1 NaN NaN 0 6351100 0 6351100 25584 1012 9670 9934 40040 40040 NAIASDSEADSDTEVPK 17 1 0 Unmodified _NAIASDSEADSDTEVPK_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.4053 2 874.894685 1747.77482 NaN NaN NaN 0.67257 0.00058843 NaN NaN NaN NaN 41.629 0.09166 41.629 41.557 41.649 0 0 0 0 0.0026969 1 21972 53.967 44.279 1 NaN NaN 0 1192600 0 1192600 25585 1012 9670 9934 40041 40041 NAIASDSEADSDTEVPK 17 1 0 Unmodified _NAIASDSEADSDTEVPK_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.9021 2 874.894685 1747.77482 NaN NaN NaN 0.31172 0.00027272 NaN NaN NaN NaN 40.705 0.34576 40.705 40.524 40.87 0 0 0 0 2.5065E-09 1 21720 101.39 82.075 1 NaN NaN 0 5094800 0 5094800 25586 1012 9670 9934 40042 40042 NAIFHLLK 8 1 0 Unmodified _NAIFHLLK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.2972 2 478.28982 954.565087 91414.88 0.21313 0.00010194 -0.44279 -0.00021178 -0.22966 -0.00010984 478.28904252979 482.296963550325 75.739 0.79994 75.739 75.427 76.227 0 206 67 4 0 0 0 0.013762 1 44599 64.567 52.918 1 1.1445 1.1262 0 19872000 9634100 10238000 25587 1565 9671 9935 40043 40043 NAIFHLLK 8 1 0 Unmodified _NAIFHLLK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.2898 2 478.28982 954.565087 87439.35 0.10899 5.2128E-05 0.36482 0.00017449 0.47381 0.00022662 478.289845602985 482.297034267289 83.029 0.42899 83.029 82.847 83.276 0 96 24 6 0 0 0 0.012282 2 45211 67.981 60.751 1 1.963 1.5673 0 9247100 3205400 6041700 25588 1565 9671 9935 40044;40045 40045 NAIFHLLK 8 1 0 Unmodified _NAIFHLLK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.2969 2 478.28982 954.565087 88447.06 0.28865 0.00013806 -0.17876 -8.5499E-05 0.1099 5.2562E-05 478.28957653578 482.296729960515 82.923 0.55088 82.923 82.742 83.293 0 133 31 8 0 0 0 0.04808 1 44271 44.447 33.574 1 1.7588 1.4534 0 11706000 4191600 7514300 25589 1565 9671 9935 40046 40046 NAIMFGK 7 1 0 Oxidation (M) _NAIM(ox)FGK_ NAIM(1)FGK NAIM(42.47)FGK 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 398.7045 2 398.704731 795.39491 97657.05 0.15825 6.3095E-05 -0.0098091 -3.9109E-06 0.14844 5.9184E-05 398.704614283113 402.711733293777 33.713 1.0394 33.713 33.356 34.395 0 298 79 5 0 0 0 0.040941 1 16953 42.474 21.49 1 1.0926 1.2265 0 76120000 37499000 38621000 25590 2148 9672 9936 40047 40047 1995 NAINIEELFQGISR 14 0 1 Unmodified _NAINIEELFQGISR_ 0 0 0 Q53EY4;Q13636 Q53EY4 Q53EY4 RAB31 Ras-related protein Rab-31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.4242 2 802.425562 1602.83657 70517.66 1.2797 0.0010269 -0.78278 -0.00062813 0.49696 0.00039877 802.425002661677 807.427650600306 127 0.37292 127 126.79 127.17 0 67 20 5 0 0 0 0.00022143 1 82684 66.289 66.289 1 1.5389 1.6111 0 4551100 1717400 2833700 25591 1719 9673 9937 40048 40048 NAINIEELFQGISR 14 0 1 Unmodified _NAINIEELFQGISR_ 0 0 0 Q53EY4;Q13636 Q53EY4 Q53EY4 RAB31 Ras-related protein Rab-31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.9272 2 802.425562 1602.83657 69145.62 1.0013 0.00080349 -0.56943 -0.00045693 0.4319 0.00034657 802.926486325957 807.428175109525 126.55 0.38866 126.55 126.41 126.8 0 88 23 6 0 0 0 0.00013865 1 84472 78.692 68.169 1 1.5176 1.5131 0 7085300 3099600 3985800 25592 1719 9673 9937 40049 40049 NAIQIVQQAVK 11 1 0 Unmodified _NAIQIVQQAVK_ 0 0 0 Q15058 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.3668 2 606.358962 1210.70337 83656.11 0.72449 0.0004393 0.4519 0.00027401 1.1764 0.00071331 606.3591087006 610.366308590366 79.925 0.31796 79.925 79.784 80.102 0 49 24 4 0 0 0 0.018592 1 48667 44.719 44.719 1 1.6359 1.6403 0 6857700 3036400 3821300 25593 1751 9674 9938 40050 40050 NAIVVLIPK 9 1 0 Unmodified _NAIVVLIPK_ 0 0 0 Q49AG4;G3V1J5;A8QI98;Q9Y2L1;B3KM83;A0A024R643 Q49AG4 Q49AG4 DIS3;KIAA1008 Exosome complex exonuclease RRP44 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.8204 2 483.820953 965.627353 92111.29 0.31105 0.00015049 0.29737 0.00014387 0.60842 0.00029437 483.820806128906 487.828037213583 93.8 0.48743 93.8 93.609 94.097 0 88 42 4 0 0 0 0.032386 1 58229 45.081 22.301 1 1.9914 2.012 0 13189000 4714400 8474800 25594 802 9675 9939 40051 40051 NALANPLYCPDYR 13 0 1 Unmodified _NALANPLYCPDYR_ 0 0 0 H3BSJ9;H3BRG4;P22695;H3BP04 H3BSJ9 H3BSJ9 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.8777 2 783.872108 1565.72966 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.619 1 81.619 81.119 82.119 -7.6294E-06 0 0 0 0.0044447 1 49886 60.434 44.862 1 25595 1305 9676 9940 40052 40052 NALANPLYCPDYR 13 0 1 Unmodified _NALANPLYCPDYR_ 0 0 0 H3BSJ9;H3BRG4;P22695;H3BP04 H3BSJ9 H3BSJ9 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.8768 2 783.872108 1565.72966 71345.54 0.67962 0.00053274 0.070992 5.5648E-05 0.75061 0.00058839 783.872393090519 788.876260083235 94.66 0.37413 94.66 94.434 94.808 0 44 22 5 0 0 0 0.052504 1 52097 28.708 22.736 1 1.0406 0.91152 0 1348200 742420 605810 25596 1305 9676 9940 40053 40053 NALESYAFNMK 11 1 0 Oxidation (M) _NALESYAFNM(ox)K_ NALESYAFNM(1)K NALESYAFNM(87.31)K 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.3029 2 652.302995 1302.59144 74910.61 0.60473 0.00039447 -0.034025 -2.2195E-05 0.5707 0.00037227 652.302875941619 656.309972610311 65.372 0.95714 65.372 64.813 65.77 0 402 85 6 0 0 0 0.00015778 1 37463 87.308 82.524 1 1.1773 1.2644 0 39533000 18985000 20548000 25597 533 9677 9941 40054 40054 394 NALESYAFNMK 11 1 0 Oxidation (M) _NALESYAFNM(ox)K_ NALESYAFNM(1)K NALESYAFNM(102.07)K 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3036 2 652.302995 1302.59144 75318.41 0.6629 0.00043241 0.4491 0.00029295 1.112 0.00072536 652.302941106144 656.310088306661 64.049 0.97304 64.049 63.577 64.55 0 465 90 7 0 0 0 1.3234E-05 1 37590 102.07 97.284 1 1.1045 1.2146 0 42337000 22116000 20221000 25598 533 9677 9941 40055 40055 394 NALFNLMFLDLDK 13 1 0 Oxidation (M) _NALFNLM(ox)FLDLDK_ NALFNLM(1)FLDLDK NALFNLM(112.15)FLDLDK 0 1 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.4103 2 785.402709 1568.79087 68995.8 1.011 0.00079403 0.15371 0.00012073 1.1647 0.00091476 785.402510640733 789.409848606471 130.65 0.7355 130.65 130.36 131.1 0 213 46 7 0 0 0 2.125E-07 1 85137 112.15 100.93 1 1.9819 1.9787 0 7822900 2187900 5635100 25599 1412 9678 9942 40056 40056 1105 NALFNLMFLDLDK 13 1 0 Oxidation (M) _NALFNLM(ox)FLDLDK_ NALFNLM(1)FLDLDK NALFNLM(90.65)FLDLDK 0 1 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.4106 2 785.402709 1568.79087 68418.41 0.90919 0.00071408 0.34877 0.00027393 1.258 0.00098801 785.402649661376 789.41023768389 130.26 0.75879 130.26 129.95 130.71 0 207 49 6 0 0 0 5.9673E-05 2 86923 90.653 90.653 1 2.0344 2.131 0 10671000 3251000 7420300 25600 1412 9678 9942 40057;40058 40057 1105 NALLQLTDSQIADVAR 16 0 1 Unmodified _NALLQLTDSQIADVAR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.4678 2 864.467958 1726.92136 65867.77 1.0104 0.00087348 0.17027 0.00014719 1.1807 0.0010207 864.46832637282 869.472323141692 111.29 0.6231 111.29 110.96 111.59 0 252 43 8 0 0 0 2.1867E-34 2 69990 161.48 161.48 1 0.88966 0.98729 0 68844000 36840000 32004000 25601 1411 9679 9943 40059;40060 40060 NALLQLTDSQIADVAR 16 0 1 Unmodified _NALLQLTDSQIADVAR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.4736 2 864.467958 1726.92136 66084.4 0.62913 0.00054386 0.23317 0.00020156 0.8623 0.00074543 864.467898737672 869.472585057223 110.72 0.68874 110.72 110.38 111.07 0 308 51 8 0 0 0 5.531E-13 1 71246 124.21 105.58 1 0.90677 1.0315 0 49144000 26602000 22542000 25602 1411 9679 9943 40061 40061 NALLQLTDSQIADVAR 16 0 1 Unmodified _NALLQLTDSQIADVAR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.9738 2 864.467958 1726.92136 65361.13 0.76088 0.00065776 0.6868 0.00059372 1.4477 0.0012515 864.970013509237 869.472323483841 122.65 0.40107 122.65 122.46 122.86 7.6294E-06 111 17 9 0 0 0 2.935E-06 2 73162 90.793 82.196 1 1.0358 0.84783 0 13273000 6462200 6811000 25603 1411 9679 9943 40062;40063 40062 NALLQLTDSQIADVAR 16 0 1 Unmodified _NALLQLTDSQIADVAR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 869.4724 2 864.467958 1726.92136 66299.86 0.68982 0.00059633 0.56126 0.00048519 1.2511 0.0010815 864.46862933091 869.472265849393 122.55 0.48405 122.55 122.22 122.7 -7.6294E-06 102 18 8 0 0 0 7.1962E-25 2 72190 145.6 121.85 1 0.94533 0.76254 0 11258000 5881100 5377200 25604 1411 9679 9943 40064;40065 40064 NALQEAEAR 9 0 1 Unmodified _NALQEAEAR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2547 2 501.254163 1000.49377 84059.94 0.45918 0.00023017 0.59896 0.00030023 1.0581 0.0005304 501.25439253738 506.258077784941 25.099 0.49547 25.099 24.857 25.353 0 68 18 7 0 0 0 0.00033904 1 10813 101.54 67.289 1 0.95925 1.1146 0 63353000 30157000 33196000 25605 1435 9680 9944 40066 40066 NALQEAEAR 9 0 1 Unmodified _NALQEAEAR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.2584 2 501.254163 1000.49377 83795.24 0.26487 0.00013277 -0.24758 -0.0001241 0.017294 8.6688E-06 501.254061454568 506.258084615609 28.388 0.46502 28.388 28.128 28.593 0 122 23 9 0 0 0 0.0010484 2 11308 90.709 62.247 1 1.645 1.3489 0 12516000 4670300 7845600 25606 1435 9680 9944 40067;40068 40067 NALQEAEAR 9 0 1 Unmodified _NALQEAEAR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.258 2 501.254163 1000.49377 84153.27 -0.11202 -5.615E-05 0.071562 3.5871E-05 -0.040457 -2.0279E-05 501.254291646548 506.258298569011 28.588 0.68836 28.588 28.156 28.845 0 151 39 6 0 0 0 0.029769 2 10837 46.129 25.504 1 1.5307 1.27 0 5430000 2205700 3224300 25607 1435 9680 9944 40069;40070 40069 NALSSALAQNTDLK 14 1 0 Unmodified _NALSSALAQNTDLK_ 0 0 0 Q9H4L5 Q9H4L5 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.3846 2 723.383362 1444.75217 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.871 1 75.871 75.371 76.371 0 0 0 0 0.01256 1 45757 62.408 44.599 1 25608 2032 9681 9945 40071 40071 NAPELDCLIR 10 0 1 Unmodified _NAPELDCLIR_ 0 0 0 A0A024R363;A0A087X0F1;Q9UK61 A0A024R363;Q9UK61 A0A024R363 C3orf63;FAM208A Protein FAM208A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.81 2 600.805705 1199.59686 79951.72 0.68064 0.00040893 -0.5127 -0.00030804 0.16793 0.0001009 600.804038563961 605.809245400842 98.598 0.8766 98.598 98.191 99.067 0 108 32 6 0 0 0 0.043945 1 54759 37.191 29.266 1 1.41 1.2775 0 2181300 1163200 1018100 25609 129;2105 9682 9946 40072 40072 NAPNDASYDAVR 12 0 1 Unmodified _NAPNDASYDAVR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8017 2 646.796923 1291.57929 73332.45 0.84721 0.00054798 0.056585 3.6599E-05 0.9038 0.00058457 646.796475903854 651.801095003935 28.894 0.30954 28.894 28.759 29.069 1.9073E-06 55 15 6 0 0 0 3.5535E-06 2 13810 111.06 111.06 1 1.8969 1.9673 0 22722000 9029900 13693000 25610 1205 9683 9947 40073;40074 40073 NAPNDASYDAVR 12 0 1 Unmodified _NAPNDASYDAVR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8002 2 646.796923 1291.57929 75189.34 0.82346 0.00053261 -0.64417 -0.00041665 0.17929 0.00011597 646.795975639326 651.80068029543 28.154 0.21008 28.154 28.076 28.286 0 32 8 6 0 0 0 2.5406E-05 3 13337 100.88 95.512 1 1.7909 2.0599 0 53356000 21371000 31985000 25611 1205 9683 9947 40075;40076;40077 40075 NAPNDASYDAVR 12 0 1 Unmodified _NAPNDASYDAVR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.8018 2 646.796923 1291.57929 74305.76 0.40927 0.00026471 0.30713 0.00019865 0.7164 0.00046337 646.797001487612 651.8014017684 32.848 0.18752 32.848 32.73 32.918 0 26 8 5 0 0 0 0.011265 2 14306 45.829 45.829 1 1.0878 0.90925 0 3495200 1773700 1721500 25612 1205 9683 9947 40078;40079 40078 NAPQISDGSEVVVVK 15 1 0 Unmodified _NAPQISDGSEVVVVK_ 0 0 0 B3KPM8;Q8N5C6 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.9159 2 771.41212 1540.80969 71041 0.89409 0.00068971 1.2432 0.00095901 2.1373 0.0016487 771.412247410334 775.922421514459 71.725 0.44736 71.725 71.518 71.966 7.6294E-06 127 38 5 0 0 0 0.024315 1 41858 44.564 36.259 1 1.4142 1.5012 0 15786000 7409000 8376800 25613 921 9684 9948 40080 40080 NAPQISDGSEVVVVK 15 1 0 Unmodified _NAPQISDGSEVVVVK_ 0 0 0 B3KPM8;Q8N5C6 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.4129 2 771.41212 1540.80969 70073.2 0.78506 0.0006056 1.0585 0.00081654 1.8436 0.0014221 771.411929094579 775.922385417722 70.607 0.36743 70.607 70.442 70.81 0 97 28 5 0 0 0 0.0099905 1 42158 42.475 42.475 1 1.0134 1.0119 0 14188000 6702400 7485500 25614 921 9684 9948 40081 40081 NAQFIIISLR 10 0 1 Unmodified _NAQFIIISLR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8551 2 587.850773 1173.68699 78561.58 1.1917 0.00070055 0.17204 0.00010113 1.3638 0.00080169 587.85089988688 592.854976599106 111.51 0.65831 111.51 111.21 111.86 7.6294E-06 264 47 9 0 0 0 2.8483E-09 3 70168 125.82 92.977 1 0.84704 1.0018 0 289530000 155050000 134480000 25615 2070 9685 9949 40082;40083;40084 40084 NAQFIIISLR 10 0 1 Unmodified _NAQFIIISLR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.8553 2 587.850773 1173.68699 78755.54 0.63206 0.00037155 0.11538 6.7827E-05 0.74744 0.00043938 587.850833680417 592.854914691691 110.91 0.65508 110.91 110.55 111.21 0 289 49 8 0 0 0 3.7286E-09 3 71332 125.16 92.32 1 0.83423 0.95802 0 78789000 44006000 34784000 25616 2070 9685 9949 40085;40086;40087 40086 NAQFIIISLR 10 0 1 Unmodified _NAQFIIISLR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.8557 2 587.850773 1173.68699 78872.61 0.83904 0.00049323 0.18534 0.00010895 1.0244 0.00060219 587.850778495532 592.854968917425 122.75 0.97922 122.75 122.48 123.46 7.6294E-06 227 45 8 0 0 0 2.8741E-08 2 73169 120.12 84.093 1 1.8093 1.5494 0 40541000 15160000 25381000 25617 2070 9685 9949 40088;40089 40088 NAQFIIISLR 10 0 1 Unmodified _NAQFIIISLR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.3563 2 587.850773 1173.68699 79085.3 0.85849 0.00050467 0.17092 0.00010048 1.0294 0.00060514 587.8508282216 592.854928933771 122.55 1.0893 122.55 122.24 123.33 0 241 52 10 0 0 0 0.0024909 2 72080 68.846 44.691 1 1.908 1.6644 0 29768000 10809000 18959000 25618 2070 9685 9949 40090;40091 40090 NASASFQELEDKK 13 2 0 Unmodified _NASASFQELEDKK_ 0 0 1 Q99543;Q6P5S9;H7C3L7;F2Z3H0;F2Z3N9 Q99543 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8741 2 733.85972 1465.70489 72869.71 0.68111 0.00049984 -0.16497 -0.00012107 0.51614 0.00037877 733.859439590556 741.873863832044 40.221 0.33336 40.221 40.075 40.409 0 61 28 5 0 0 0 0.007264 1 21049 48.568 48.568 1 2.3549 2.7186 0 9794100 3153500 6640600 25619 1993 9686 9950 40092 40092 NASASFQELEDKK 13 2 0 Unmodified _NASASFQELEDKK_ 0 0 1 Q99543;Q6P5S9;H7C3L7;F2Z3H0;F2Z3N9 Q99543 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.3771 2 733.85972 1465.70489 72320.3 0.63686 0.00046737 -0.35639 -0.00026154 0.28047 0.00020583 733.85872326588 741.87387790427 39.105 0.34689 39.105 38.908 39.255 0 59 28 4 0 0 0 0.00026647 1 20581 87.667 87.667 1 2.1289 2.4275 0 11325000 4131600 7193900 25620 1993 9686 9950 40093 40093 NASLQDTLEVLQSSYK 16 1 0 Unmodified _NASLQDTLEVLQSSYK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 898.959 2 898.457256 1794.89996 65647.93 0.57752 0.00051888 -0.45896 -0.00041235 0.11857 0.00010653 898.457128861566 902.464949973317 124.59 0.42316 124.59 124.37 124.79 -7.6294E-06 100 18 8 0 0 0 0.00035739 1 74630 52.555 52.555 1 1.1442 0.90938 0 6579700 3037800 3541900 25621 1581 9687 9951 40094 40094 NASLQDTLEVLQSSYK 16 1 0 Unmodified _NASLQDTLEVLQSSYK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 898.458 2 898.457256 1794.89996 64971.23 0.37635 0.00033814 -0.0061422 -5.5185E-06 0.37021 0.00033262 898.958431962943 902.465073355204 124.43 0.38061 124.43 124.23 124.61 0 81 16 6 0 0 0 0.0022645 1 73630 41.644 41.644 1 1.4583 1.191 0 8087900 3072200 5015700 25622 1581 9687 9951 40095 40095 NASMNTQHGTATEVAVETTTPK 22 1 0 Oxidation (M) _NASM(ox)NTQHGTATEVAVETTTPK_ NASM(1)NTQHGTATEVAVETTTPK NASM(116.94)NTQHGTATEVAVETTTPK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.7019 3 768.697261 2303.06995 NaN NaN NaN -0.31837 -0.00024473 NaN NaN NaN NaN 35.267 0.48558 35.267 35.005 35.491 0 0 0 0 2.5769E-24 1 17612 116.94 115.47 1 NaN NaN 0 53086000 0 53086000 25623 2103 9688 9952 40096 40096 1931 NASMNTQHGTATEVAVETTTPK 22 1 0 Oxidation (M) _NASM(ox)NTQHGTATEVAVETTTPK_ NASM(1)NTQHGTATEVAVETTTPK NASM(108.5)NTQHGTATEVAVETTTPK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.7025 3 768.697261 2303.06995 NaN NaN NaN -0.53271 -0.00040949 NaN NaN NaN NaN 34.278 0.46166 34.278 34.044 34.505 0 0 0 0 1.8393E-23 1 17243 108.5 106.96 1 NaN NaN 0 66181000 0 66181000 25624 2103 9688 9952 40097 40097 1931 NASMNTQHGTATEVAVETTTPK 22 1 0 Oxidation (M) _NASM(ox)NTQHGTATEVAVETTTPK_ NASM(1)NTQHGTATEVAVETTTPK NASM(51.64)NTQHGTATEVAVETTTPK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 771.703 3 768.697261 2303.06995 NaN NaN NaN 0.041714 3.2066E-05 NaN NaN NaN NaN 41.171 0.66488 41.171 40.876 41.541 0 0 0 0 0.00014198 1 18436 51.645 50.183 1 NaN NaN 0 13887000 0 13887000 25625 2103 9688 9952 40098 40098 1931 NASMNTQHGTATEVAVETTTPK 22 1 0 Unmodified _NASMNTQHGTATEVAVETTTPK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 766.3713 3 763.365623 2287.07504 NaN NaN NaN -0.14512 -0.00011078 NaN NaN NaN NaN 51.19 0.59849 51.19 50.869 51.468 0 0 0 0 1.704E-09 1 25122 76.417 72.977 1 NaN NaN 0 7817900 0 7817900 25626 2103 9688 9953 40099 40099 NASMNTQHGTATEVAVETTTPK 22 1 0 Unmodified _NASMNTQHGTATEVAVETTTPK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.0375 3 763.365623 2287.07504 NaN NaN NaN -0.10108 -7.7161E-05 NaN NaN NaN NaN 51.596 0.57153 51.596 51.322 51.893 0 0 0 0 3.2169E-13 1 24806 84.689 81.451 1 NaN NaN 0 5669600 0 5669600 25627 2103 9688 9953 40100 40100 NASPEDVEYYNCQQELTDDLHK 22 1 0 Unmodified _NASPEDVEYYNCQQELTDDLHK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.0596 3 890.053773 2667.13949 65947.31 0.547 0.00048686 0.13754 0.00012241 0.68454 0.00060927 890.388513637645 892.724998405567 78.582 0.46609 78.582 78.358 78.824 0 179 40 6 0 0 0 2.1469E-07 2 46555 51.31 51.302 1 0.65593 0.68461 0 16766000 9227000 7539000 25628 1366 9689 9954 40101;40102 40102 NASPEDVEYYNCQQELTDDLHK 22 1 0 Unmodified _NASPEDVEYYNCQQELTDDLHK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.0595 3 890.053773 2667.13949 65309.28 0.61021 0.00054312 -0.023628 -2.103E-05 0.58658 0.00052209 890.722052585096 893.393197373341 77.684 0.41222 77.684 77.479 77.891 0 179 33 8 0 0 0 1.7463E-07 2 46995 53.625 53.625 1 0.77369 0.79035 0 25802000 15124000 10678000 25629 1366 9689 9954 40103;40104 40103 NASPEDVEYYNCQQELTDDLHK 22 1 0 Unmodified _NASPEDVEYYNCQQELTDDLHK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 892.7269 3 890.053773 2667.13949 63966.96 0.65984 0.00058729 -0.13525 -0.00012038 0.52459 0.00046691 890.388487596391 893.059656721776 90.823 0.46285 90.823 90.598 91.06 0 188 26 9 0 0 0 0.050758 2 50309 10.119 10.119 1 0.83947 0.67298 0 8314700 4064400 4250300 25630 1366 9689 9954 40105;40106 40105 NASPEDVEYYNCQQELTDDLHK 22 1 0 Unmodified _NASPEDVEYYNCQQELTDDLHK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 893.0591 3 890.053773 2667.13949 64650.52 0.13509 0.00012024 -0.086785 -7.7243E-05 0.048305 4.2994E-05 890.054059099721 893.059282889307 90.767 0.3821 90.767 90.568 90.95 -7.6294E-06 145 19 10 0 0 0 1.4706E-05 2 49474 41.798 41.798 1 0.8859 0.72185 0 7524600 4045300 3479300 25631 1366 9689 9954 40107;40108 40108 NATDAVGIVLK 11 1 0 Unmodified _NATDAVGIVLK_ 0 0 0 P51398;V9GYW1;V9GYA7;V9GYJ9;V9GYL9;V9GYC9;V9GZ03;V9GY11 P51398 P51398 DAP3 28S ribosomal protein S29, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.8195 2 550.819138 1099.62372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.486 1 80.486 79.986 80.986 0 0 0 0 0.031266 1 47861 48.423 24.468 1 25632 1594 9690 9955 40109 40109 NAVITVPAYFNDSQR 15 0 1 Unmodified _NAVITVPAYFNDSQR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.9296 2 847.928468 1693.84238 66186.94 0.85098 0.00072157 -1.1545 -0.00097893 -0.30352 -0.00025736 848.429725273604 852.932535824143 97.859 0.84245 97.859 97.436 98.279 0 480 69 11 0 0 0 0.0016034 2 59646 47.288 41.647 1 2.518 2.8028 0 78862000 27100000 51761000 25633 1092 9691 9956 40110;40111 40111 NAVITVPAYFNDSQR 15 0 1 Unmodified _NAVITVPAYFNDSQR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.9341 2 847.928468 1693.84238 66385.95 1.0577 0.00089684 -0.16347 -0.00013861 0.89422 0.00075823 848.429795738085 852.932561400634 97.101 0.78099 97.101 96.752 97.533 0 285 62 7 0 0 0 0.00022446 2 60443 74.962 68.99 1 2.3316 2.691 0 71075000 21935000 49140000 25634 1092 9691 9956 40112;40113 40112 NAVITVPAYFNDSQR 15 0 1 Unmodified _NAVITVPAYFNDSQR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 852.9333 2 847.928468 1693.84238 65861.84 0.87616 0.00074292 -0.51842 -0.00043958 0.35774 0.00030334 847.928060221807 852.932675703984 110.71 0.63651 110.71 110.4 111.03 0 209 29 11 0 0 0 1.6187E-05 2 63970 88.338 82.366 1 1.3491 1.1004 0 15383000 6314500 9068700 25635 1092 9691 9956 40114;40115 40115 NAVITVPAYFNDSQR 15 0 1 Unmodified _NAVITVPAYFNDSQR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 852.9331 2 847.928468 1693.84238 66066.9 0.77385 0.00065617 -0.60134 -0.00050989 0.1725 0.00014627 848.429614264433 852.93252060778 110.57 0.6425 110.57 110.29 110.93 0 262 34 12 0 0 0 0.00022 2 62907 63.727 57.755 1 1.312 1.0887 0 15209000 6243500 8965100 25636 1092 9691 9956 40116;40117 40117 NAVIVDTTICDPHYNLAR 18 0 1 Unmodified _NAVIVDTTICDPHYNLAR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.6829 3 691.345834 2071.01567 73383.74 0.70183 0.00048521 0.5823 0.00040257 1.2841 0.00088778 691.680180801777 694.683608729507 97.263 0.69086 97.263 96.97 97.66 0 108 35 7 0 0 0 2.0945E-05 2 54704 39.657 39.657 1 1.2341 1.0371 0 3103700 1520500 1583200 25637 1699 9692 9957 40118;40119 40119 NAVIVDTTICDPHYNLAR 18 0 1 Unmodified _NAVIVDTTICDPHYNLAR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 691.3454 3 691.345834 2071.01567 76248.91 0.3434 0.00023741 -0.5016 -0.00034678 -0.1582 -0.00010937 691.346046373676 694.681965848428 97.038 0.44353 97.038 96.841 97.284 0 69 21 5 0 0 0 0.031213 1 53794 17.863 17.863 1 1.1302 0.97066 0 2805800 1383300 1422500 25638 1699 9692 9957 40120 40120 NAVLAIYTIYR 11 0 1 Unmodified _NAVLAIYTIYR_ 0 0 0 P53618;E9PP73 P53618 P53618 COPB1 Coatomer subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.8741 2 648.869163 1295.72377 NaN NaN NaN -0.31505 -0.00020443 NaN NaN NaN NaN 107.33 0.36682 107.33 107.21 107.58 -7.6294E-06 0 0 0 0.0023656 1 66828 75.294 67.726 1 NaN NaN 0 2566500 0 2566500 25639 1606 9693 9958 40121 40121 NAVLAIYTIYR 11 0 1 Unmodified _NAVLAIYTIYR_ 0 0 0 P53618;E9PP73 P53618 P53618 COPB1 Coatomer subunit beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.8739 2 648.869163 1295.72377 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.59 1 106.59 106.09 107.09 0 0 0 0 3.4794E-05 1 67899 86.624 72.506 1 25640 1606 9693 9958 40122 40122 NAVSVHSNLNSEAVMK 16 1 0 Oxidation (M) _NAVSVHSNLNSEAVM(ox)K_ NAVSVHSNLNSEAVM(1)K NAVSVHSNLNSEAVM(47.92)K 0 1 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.2892 3 572.617554 1714.83083 78515.78 0.56843 0.00032549 -0.13867 -7.9405E-05 0.42976 0.00024609 572.61775750839 575.288866992484 32.638 0.64101 32.638 32.221 32.862 3.8147E-06 282 57 7 0 0 0 0.00020311 1 16144 47.916 47.916 1 1.4544 1.5667 0 33695000 13935000 19760000 25641 1813 9694 9959 40123 40123 1674 NCAVEFNFGQR 11 0 1 Unmodified _NCAVEFNFGQR_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;M0QYZ0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.8056 2 671.303861 1340.59317 75657.55 0.88684 0.00059534 -0.24327 -0.00016331 0.64357 0.00043203 671.3037222025 676.307933453868 75.165 0.47546 75.165 74.892 75.368 0 117 37 4 0 0 0 0.0058056 1 44104 55.549 55.549 1 1.0061 1.0286 0 14591000 7091300 7499700 25642 49 9695 9960 40124 40124 NCAVEFNFGQR 11 0 1 Unmodified _NCAVEFNFGQR_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;M0QYZ0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3039 2 671.303861 1340.59317 75300.48 0.58104 0.00039006 0.1454 9.7605E-05 0.72644 0.00048766 671.304164967517 676.308213053307 74.024 0.51645 74.024 73.763 74.28 0 147 42 5 0 0 0 0.00015274 3 44482 94.85 94.85 1 0.9513 0.94401 0 15975000 7544900 8430400 25643 49 9695 9960 40125;40126;40127 40126 NCAVEFNFGQR 11 0 1 Unmodified _NCAVEFNFGQR_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;M0QYZ0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.3051 2 671.303861 1340.59317 75274.96 0.53421 0.00035862 0.011767 7.8993E-06 0.54598 0.00036652 671.303797484663 676.308077306323 85.696 0.40918 85.696 85.496 85.906 0 93 24 5 0 0 0 0.051215 1 46898 34.532 31.554 1 0.86208 0.7478 0 2452300 1066600 1385800 25644 49 9695 9960 40128 40128 NCAVEFNFGQR 11 0 1 Unmodified _NCAVEFNFGQR_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;M0QYZ0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.3055 2 671.303861 1340.59317 74825.97 0.59311 0.00039816 0.44154 0.00029641 1.0346 0.00069456 671.304479469123 676.308393966014 85.821 0.45018 85.821 85.594 86.045 0 94 27 5 0 0 0 0.038119 1 46223 36.334 36.334 1 1.0184 0.88401 0 2656900 1303300 1353700 25645 49 9695 9960 40129 40129 NCECLSCIDCGK 12 1 0 Unmodified _NCECLSCIDCGK_ 0 0 0 Q9NX58;A8K3Y5;D6RDJ1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.2963 2 758.288379 1514.5622 69507.08 0.90946 0.00068963 -0.66847 -0.00050689 0.24099 0.00018274 758.288649434145 762.295698853989 41.249 0.5184 41.249 41.028 41.547 0 220 42 9 0 0 0 1.2512E-06 3 21631 112.13 112.13 1 0.68891 0.74166 0 40674000 24010000 16664000 25646 2079 9696 9961 40130;40131;40132 40131 NCECLSCIDCGK 12 1 0 Unmodified _NCECLSCIDCGK_ 0 0 0 Q9NX58;A8K3Y5;D6RDJ1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.2965 2 758.288379 1514.5622 70417.31 0.67102 0.00050883 -0.35772 -0.00027126 0.3133 0.00023757 758.288535248264 762.295637870547 40.401 0.68359 40.401 40.028 40.711 0 235 56 6 0 0 0 2.0954E-08 2 21443 120.63 120.63 1 0.72327 0.75674 0 34460000 18980000 15480000 25647 2079 9696 9961 40133;40134 40134 NCECLSCIDCGK 12 1 0 Unmodified _NCECLSCIDCGK_ 0 0 0 Q9NX58;A8K3Y5;D6RDJ1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 762.2959 2 758.288379 1514.5622 68031.13 0.38563 0.00029242 -0.84101 -0.00063773 -0.45538 -0.00034531 758.288525597833 762.295627483105 47.913 0.87069 47.913 47.547 48.418 -3.8147E-06 428 59 12 0 0 0 4.5357E-08 2 23184 115.18 115.18 1 1.1219 0.91189 0 28929000 12974000 15955000 25648 2079 9696 9961 40135;40136 40136 NCECLSCIDCGK 12 1 0 Unmodified _NCECLSCIDCGK_ 0 0 0 Q9NX58;A8K3Y5;D6RDJ1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 758.2889 2 758.288379 1514.5622 67588 0.33381 0.00025312 -0.89217 -0.00067652 -0.55837 -0.0004234 758.288431620572 762.295428453199 48.385 0.95087 48.385 48.002 48.953 0 565 79 10 0 0 0 1.7582E-05 1 22954 104.52 104.52 1 1.083 0.87936 0 24816000 11967000 12849000 25649 2079 9696 9961 40137 40137 NCIISLVTQR 10 0 1 Unmodified _NCIISLVTQR_ 0 0 0 Q13868;A3KFL5;A3KFL2;B3KQW2;A2VCR1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3281 2 602.329347 1202.64414 NaN NaN NaN -1.7109 -0.0010305 NaN NaN NaN NaN 88.859 0.23529 88.859 88.738 88.973 0 0 0 0 0.0068687 1 53601 66.568 51.792 1 NaN NaN 0 9833400 9833400 0 25650 1722 9697 9962 40138 40138 NCIISLVTQR 10 0 1 Unmodified _NCIISLVTQR_ 0 0 0 Q13868;A3KFL5;A3KFL2;B3KQW2;A2VCR1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.3334 2 602.329347 1202.64414 77390.97 0.41863 0.00025216 0.3378 0.00020347 0.75644 0.00045562 602.329514292647 607.333664158501 101.59 0.3878 101.59 101.43 101.82 0 88 24 5 0 0 0 0.028233 1 57561 43.512 39.214 1 0.84805 0.709 0 3571800 1879800 1692000 25651 1722 9697 9962 40139 40139 NCIIVSPDAGGAK 13 1 0 Unmodified _NCIIVSPDAGGAK_ 0 0 0 A0A140VK41;P11908;B2R860;H7C540;D3YTJ7 A0A140VK41 A0A140VK41 PRPS2 Ribose-phosphate pyrophosphokinase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3411 2 651.329544 1300.64454 NaN NaN NaN 3.2038 0.0020867 NaN NaN NaN NaN 51.454 0.3315 51.454 51.317 51.649 0 0 0 0 0.0057954 1 28475 56.359 38.945 1 NaN NaN 0 5679100 0 5679100 25652 616 9698 9963 40140 40140 NCISTVVHQGLIR 13 0 1 Unmodified _NCISTVVHQGLIR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.9095 2 748.903742 1495.79293 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.208 1 69.208 68.708 69.708 0 0 0 0 0.017329 1 40178 49.35 39.119 1 25653 1665 9699 9964 40141 40141 NCISTVVHQGLIR 13 0 1 Unmodified _NCISTVVHQGLIR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.4045 2 748.903742 1495.79293 72163.93 0.60132 0.00045033 -0.40296 -0.00030178 0.19835 0.00014855 748.903334529893 753.908344528051 67.339 0.52086 67.339 67.046 67.567 0 140 42 5 0 0 0 0.011998 1 40000 39.918 39.918 1 0.51113 0.50423 0 12922000 8019300 4903000 25654 1665 9699 9964 40142 40142 NCISTVVHQGLIR 13 0 1 Unmodified _NCISTVVHQGLIR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.904 2 748.903742 1495.79293 70863.95 0.725 0.00054295 -0.31113 -0.00023301 0.41387 0.00030995 748.903464563018 753.90814663166 78.826 0.57882 78.826 78.587 79.166 0 120 33 7 0 0 0 0.0017989 2 42398 56.359 52.714 1 0.29705 0.2551 0 8095600 5664700 2431000 25655 1665 9699 9964 40143;40144 40143 NCIVLIDSTPYR 12 0 1 Unmodified _NCIVLIDSTPYR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.8762 2 725.871576 1449.7286 70262.23 0.88026 0.00063895 -0.18087 -0.00013129 0.69939 0.00050767 725.871531615417 730.87572528349 90.133 1.0487 90.133 89.848 90.897 0 560 86 9 0 0 0 2.1158E-18 4 54686 148.32 129.54 1 0.65659 0.77626 0 258010000 148090000 109920000 25656 1635 9700 9965 40145;40146;40147;40148 40147 NCIVLIDSTPYR 12 0 1 Unmodified _NCIVLIDSTPYR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.8705 2 725.871576 1449.7286 70769.82 0.56602 0.00041086 -0.090304 -6.5549E-05 0.47572 0.00034531 725.871619430295 730.875801268206 89.167 0.99847 89.167 88.905 89.903 0 538 82 9 0 0 0 1.7055E-08 5 54929 121.5 121.5 1 0.66473 0.7761 0 539470000 302950000 236520000 25657 1635 9700 9965 40149;40150;40151;40152;40153 40151 NCIVLIDSTPYR 12 0 1 Unmodified _NCIVLIDSTPYR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.8763 2 725.871576 1449.7286 70086.59 0.67699 0.0004914 -0.039852 -2.8928E-05 0.63713 0.00046248 725.871727890297 730.875799046003 103 2.6698 103 102.64 105.31 0 788 166 12 0 0 0 0.00018076 3 58423 88.056 88.056 1 0.89137 0.77402 0 224860000 114020000 110840000 25658 1635 9700 9965 40154;40155;40156 40155 NCIVLIDSTPYR 12 0 1 Unmodified _NCIVLIDSTPYR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 731.3779 2 725.871576 1449.7286 NaN NaN NaN -0.55478 -0.0004027 NaN NaN NaN NaN 99.362 0.25415 99.362 99.244 99.498 0 0 0 0 0.022576 1 56131 50.284 39.132 1 NaN NaN 0 626300 0 626300 25659 1635 9700 9965 40157 40157 NCIVLIDSTPYR 12 0 1 Unmodified _NCIVLIDSTPYR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.8773 2 725.871576 1449.7286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.95 1 104.95 104.45 105.45 0 0 0 0 0.028215 1 59830 46.796 26.493 1 25660 1635 9700 9965 40158 40158 NCIVLIDSTPYR 12 0 1 Unmodified _NCIVLIDSTPYR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.8773 2 725.871576 1449.7286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.01 1 105.01 104.51 105.51 0 0 0 0 0.0080485 1 59873 59.542 33.028 1 25661 1635 9700 9965 40159 40159 NCIVLIDSTPYR 12 0 1 Unmodified _NCIVLIDSTPYR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.379 2 725.871576 1449.7286 72494.98 0.629 0.00045657 -0.64135 -0.00046554 -0.012358 -8.97E-06 725.870943877057 730.875828229378 99.259 0.45889 99.259 98.987 99.446 0 57 28 4 0 0 0 0.020076 1 55271 39.625 39.625 1 0.86265 0.74778 0 1607400 780890 826520 25662 1635 9700 9965 40160 40160 NCIVLIDSTPYR 12 0 1 Unmodified _NCIVLIDSTPYR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.8762 2 725.871576 1449.7286 69549.38 0.47115 0.00034199 0.086162 6.2543E-05 0.55731 0.00040453 725.872043848565 730.875860991713 102.85 2.5161 102.85 102.35 104.86 0 791 163 12 0 0 0 1.5529E-37 3 57436 176.33 169.05 1 0.85265 0.7446 0 160450000 85565000 74885000 25663 1635 9700 9965 40161;40162;40163 40162 NCIVLIDSTPYR 12 0 1 Unmodified _NCIVLIDSTPYR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.8767 2 725.871576 1449.7286 NaN NaN NaN -0.7932 -0.00057576 NaN NaN NaN NaN 104.78 0.4595 104.78 104.55 105.01 0 0 0 0 0.030694 1 58825 47.302 36.151 1 NaN NaN 0 845000 0 845000 25664 1635 9700 9965 40164 40164 NCLALADDK 9 1 0 Unmodified _NCLALADDK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.2515 2 510.244949 1018.47534 84464.72 0.6148 0.0003137 0.054165 2.7638E-05 0.66897 0.00034134 510.245096646644 514.251928079112 37.28 1.1972 37.28 36.849 38.046 0 507 102 10 0 0 0 0.0014989 2 18816 84.615 69.166 1 1.06 1.2493 0 329900000 163700000 166190000 25665 1401 9701 9966 40165;40166 40165 NCLALADDK 9 1 0 Unmodified _NCLALADDK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.2513 2 510.244949 1018.47534 79155.57 0.69963 0.00035698 -0.22243 -0.00011349 0.4772 0.00024349 510.244879728766 514.251846120253 36.411 1.436 36.411 36.002 37.438 0 521 117 8 0 0 0 0.0021531 2 18502 76.1 59.136 1 0.95799 1.1278 0 441370000 217440000 223930000 25666 1401 9701 9966 40167;40168 40167 NCLALADDK 9 1 0 Unmodified _NCLALADDK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.2524 2 510.244949 1018.47534 79653.92 0.37144 0.00018953 -0.28195 -0.00014386 0.089492 4.5663E-05 510.245007201017 514.251805684047 42.13 1.5931 42.13 41.659 43.252 -3.8147E-06 551 114 10 0 0 0 0.024033 2 19535 48.423 33.642 1 1.189 1.0197 0 78797000 36260000 42537000 25667 1401 9701 9966 40169;40170 40169 NCLALADDK 9 1 0 Unmodified _NCLALADDK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.2452 2 510.244949 1018.47534 79781.56 0.080934 4.1296E-05 0.0057197 2.9184E-06 0.086654 4.4215E-05 510.245063653799 514.251980576061 42.261 1.8681 42.261 41.747 43.615 0 562 128 8 0 0 0 0.015114 3 19011 55.064 42.105 1 1.1884 1.009 0 71222000 32829000 38393000 25668 1401 9701 9966 40171;40172;40173 40172 NCLALADDKK 10 2 0 Unmodified _NCLALADDKK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.2922 2 574.29243 1146.57031 78071.46 0.32564 0.00018701 0.045148 2.5928E-05 0.37078 0.00021294 574.292408389812 582.306604873224 24.611 0.76744 24.611 24.42 25.187 0 152 35 9 0 0 0 6.5981E-30 2 10274 175.88 159.43 1 0.88289 1.0412 0 437580000 234250000 203320000 25669 1401 9702 9967 40174;40175 40175 NCLALADDKK 10 2 0 Unmodified _NCLALADDKK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 383.1971 3 383.197379 1146.57031 96086.47 -0.098808 -3.7863E-05 0.4152 0.0001591 0.31639 0.00012124 383.197426996658 388.540136314394 24.619 0.41801 24.619 24.449 24.867 1.9073E-06 94 17 8 0 0 0 3.2942E-05 3 10331 85.622 71.803 1 0.96818 1.1428 0 80561000 42425000 38136000 25670 1401 9702 9967 40176;40177;40178 40177 NCLALADDKK 10 2 0 Unmodified _NCLALADDKK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.3067 2 574.29243 1146.57031 78439.56 0.40582 0.00023306 0.1007 5.7831E-05 0.50652 0.00029089 574.292566210483 582.306566442048 24.275 0.811 24.275 23.844 24.655 1.9073E-06 194 34 10 0 0 0 1.0635E-11 2 9956 143.03 130.51 1 0.90867 1.0603 0 351080000 179740000 171340000 25671 1401 9702 9967 40179;40180 40179 NCLALADDKK 10 2 0 Unmodified _NCLALADDKK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 388.54 3 383.197379 1146.57031 94724.74 0.013957 5.3483E-06 0.36443 0.00013965 0.37838 0.000145 383.197355433273 388.54008760899 24.294 0.48053 24.294 24.053 24.533 1.9073E-06 90 20 7 0 0 0 0.00010289 1 9987 83.862 76.734 1 0.88708 1.0284 0 69976000 36964000 33012000 25672 1401 9702 9967 40181 40181 NCLALADDKK 10 2 0 Unmodified _NCLALADDKK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.3068 2 574.29243 1146.57031 78194.48 0.42966 0.00024675 -0.19808 -0.00011376 0.23158 0.00013299 574.292649147965 582.306546199459 26.902 0.73062 26.902 26.595 27.325 -1.9073E-06 220 35 10 0 0 0 2.5417E-09 2 10230 131.5 115.84 1 1.1132 0.94088 0 107760000 50611000 57151000 25673 1401 9702 9967 40182;40183 40182 NCLALADDKK 10 2 0 Unmodified _NCLALADDKK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.2924 2 574.29243 1146.57031 74494.53 0.17175 9.8633E-05 -0.11558 -6.6379E-05 0.056162 3.2254E-05 574.292623579655 582.306642121636 26.876 1.5143 26.876 26.591 28.106 1.9073E-06 285 68 10 0 0 0 1.0115E-07 2 9696 113.74 98.479 1 1.2127 1.0378 0 95674000 44265000 51410000 25674 1401 9702 9967 40184;40185 40185 NCLALADDKK 10 2 0 Unmodified _NCLALADDKK_ 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 388.5403 3 383.197379 1146.57031 94132.55 -0.18062 -6.9212E-05 0.12024 4.6075E-05 -0.060378 -2.3137E-05 383.197403646366 388.540176777703 26.878 0.62386 26.878 26.57 27.194 0 143 29 8 0 0 0 0.060446 1 9757 13.277 10.764 1 1.1666 0.98583 0 11172000 5336000 5836200 25675 1401 9702 9967 40186 40186 NCLTNFHGMDLTR 13 0 1 Oxidation (M) _NCLTNFHGM(ox)DLTR_ NCLTNFHGM(1)DLTR NCLTNFHGM(69.72)DLTR 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.2411 3 532.241542 1593.7028 79889.91 0.19574 0.00010418 -0.31201 -0.00016606 -0.11627 -6.1881E-05 532.241528253738 535.577673490207 50.909 0.72461 50.909 50.668 51.393 0 424 67 10 0 0 0 5.4757E-05 2 28086 69.716 63.81 1 1.1116 1.2975 0 196990000 93295000 103690000 25676 742 9703 9968 40187;40188 40188 579 NCLTNFHGMDLTR 13 0 1 Oxidation (M) _NCLTNFHGM(ox)DLTR_ NCLTNFHGM(1)DLTR NCLTNFHGM(205.49)DLTR 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.8593 2 797.858674 1593.7028 67980.98 0.46397 0.00037018 -0.17166 -0.00013696 0.29231 0.00023322 797.858636668902 802.862922994405 50.907 0.41829 50.907 50.702 51.121 0 177 37 7 0 0 0 3.4161E-61 1 28197 205.49 196.06 1 1.134 1.2528 0 56514000 25183000 31331000 25677 742 9703 9968 40189 40189 579 NCLTNFHGMDLTR 13 0 1 Oxidation (M) _NCLTNFHGM(ox)DLTR_ NCLTNFHGM(1)DLTR NCLTNFHGM(68.04)DLTR 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.578 3 532.241542 1593.7028 81440.82 0.36637 0.000195 -0.49355 -0.00026269 -0.12718 -6.7689E-05 532.241546203141 535.577488381381 49.442 0.51244 49.442 49.155 49.667 0 323 42 12 0 0 0 6.3473E-05 2 27709 68.044 58.994 1 1.1197 1.2993 0 329400000 168810000 160590000 25678 742 9703 9968 40190;40191 40190 579 NCLTNFHGMDLTR 13 0 1 Oxidation (M) _NCLTNFHGM(ox)DLTR_ NCLTNFHGM(1)DLTR NCLTNFHGM(96.33)DLTR 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.8636 2 797.858674 1593.7028 68284.95 0.64469 0.00051437 -0.23507 -0.00018755 0.40962 0.00032682 797.858286716249 802.862409921903 49.444 0.34969 49.444 49.238 49.588 0 158 29 7 0 0 0 2.6555E-05 1 27751 96.334 91.236 1 1.2343 1.4183 0 77615000 37499000 40116000 25679 742 9703 9968 40192 40192 579 NCLTNFHGMDLTR 13 0 1 Oxidation (M) _NCLTNFHGM(ox)DLTR_ NCLTNFHGM(1)DLTR NCLTNFHGM(41.09)DLTR 0 1 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.2417 3 532.241542 1593.7028 81541.24 0.35337 0.00018808 -0.12425 -6.613E-05 0.22912 0.00012195 532.241577601511 535.577509979756 58.672 1.1845 58.672 58.367 59.551 0 436 91 9 0 0 0 0.0027762 1 29810 41.092 36.623 1 0.52876 0.44405 0 9973400 6431300 3542100 25680 742 9703 9968 40193 40193 579 NCLTNFHGMDLTR 13 0 1 Unmodified _NCLTNFHGMDLTR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.2472 3 526.909903 1577.70788 83199.89 0.29256 0.00015415 -0.17576 -9.2611E-05 0.1168 6.1543E-05 526.909693898958 530.24614410232 84.672 0.69828 84.672 84.329 85.027 0 250 51 7 0 0 0 0.019235 1 46078 26.541 23.832 1 1.0198 0.86662 0 5273800 2492600 2781300 25681 742 9703 9969 40194 40194 NCLTNFHGMDLTR 13 0 1 Unmodified _NCLTNFHGMDLTR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 526.9099 3 526.909903 1577.70788 82943.79 0.49582 0.00026125 -0.25046 -0.00013197 0.24536 0.00012928 526.909646438293 530.246166800286 84.737 0.78871 84.737 84.372 85.161 0 261 55 8 0 0 0 0.028122 2 45408 23.138 22.893 1 0.88285 0.73323 0 5891100 2936300 2954900 25682 742 9703 9969 40195;40196 40196 NCPHIVVGTPGR 12 0 1 Unmodified _NCPHIVVGTPGR_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;B4DIJ6;F6UJC5;A0A140TA18;B4DIZ8 A0A024RCM3 A0A024RCM3 hCG_2005638;DDX39B Spliceosome RNA helicase DDX39B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.8385 2 653.837871 1305.66119 NaN NaN NaN 0.86964 0.00056861 NaN NaN NaN NaN 35.004 0.056725 35.004 34.952 35.009 0 0 0 0 0.046218 1 17767 42.243 30.395 1 NaN NaN 0 2774600 2774600 0 25683 362 9704 9970 40197 40197 NCPHVVVGTPGR 12 0 1 Unmodified _NCPHVVVGTPGR_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8381 2 646.830046 1291.64554 NaN NaN NaN 2.3462 0.0015176 NaN NaN NaN NaN 28.126 0.20283 28.126 28.059 28.262 0 0 0 0 0.0015255 1 13199 77.062 50.679 1 NaN NaN 0 5438800 0 5438800 25684 1359;521 9705 9971 40198 40198 NCPHVVVGTPGR 12 0 1 Unmodified _NCPHVVVGTPGR_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.8296 2 646.830046 1291.64554 75915.74 0.54404 0.0003519 0.30034 0.00019427 0.84438 0.00054617 646.830021433724 651.834512885663 27.302 0.31543 27.302 27.167 27.483 0 51 16 5 0 0 0 8.6207E-06 2 12605 108.7 105.13 1 0.85502 0.96934 0 48228000 20571000 27657000 25685 1359;521 9705 9971 40199;40200 40200 NCPHVVVGTPGR 12 0 1 Unmodified _NCPHVVVGTPGR_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.8916 3 431.555789 1291.64554 90661.01 -0.21333 -9.2065E-05 -0.058961 -2.5445E-05 -0.27229 -0.00011751 431.555713971578 434.892089582681 27.305 0.50165 27.305 27.167 27.669 0 83 26 6 0 0 0 2.8033E-06 1 12637 90.005 79.176 1 1.1845 1.3572 0 51179000 26396000 24783000 25686 1359;521 9705 9971 40201 40201 NCPHVVVGTPGR 12 0 1 Unmodified _NCPHVVVGTPGR_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.8299 2 646.830046 1291.64554 72724.41 0.4765 0.00030821 -0.072398 -4.6829E-05 0.4041 0.00026139 646.829982022497 651.834289572973 31.76 0.38639 31.76 31.556 31.942 1.9073E-06 88 20 6 0 0 0 0.0041381 1 13468 54.259 54.259 1 0.71024 0.59469 0 3182800 1951500 1231300 25687 1359;521 9705 9971 40202 40202 NCPHVVVGTPGR 12 0 1 Unmodified _NCPHVVVGTPGR_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 431.5561 3 431.555789 1291.64554 92116.41 -0.35679 -0.00015398 0.32349 0.00013961 -0.0333 -1.4371E-05 431.555834191466 434.892260005686 31.763 0.53076 31.763 31.542 32.072 0 121 28 7 0 0 0 0.031709 1 13508 16.265 13.919 1 0.72335 0.60827 0 4429300 2641400 1788000 25688 1359;521 9705 9971 40203 40203 NCPHVVVGTPGR 12 0 1 Unmodified _NCPHVVVGTPGR_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;K7EPJ3;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.8338 2 646.830046 1291.64554 75188.35 0.61097 0.0003952 -0.62715 -0.00040566 -0.016173 -1.0461E-05 646.829604514499 651.83396109834 31.772 0.51702 31.772 31.486 32.003 0 113 28 6 0 0 0 0.021142 1 13004 38.875 35.896 1 0.73165 0.62743 0 2829500 1688200 1141300 25689 1359;521 9705 9971 40204 40204 NCQHANAERPTVAR 14 0 2 Unmodified _NCQHANAERPTVAR_ 0 0 1 B2RAX6;Q9Y5J1;F6VJE8 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.9304 3 541.930466 1622.76957 81819.23 0.15382 8.3362E-05 -0.2006 -0.00010871 -0.046777 -2.535E-05 541.930536955731 548.602656756537 15.525 0.25826 15.525 15.448 15.706 0 33 11 6 0 0 0 0.0041748 1 2599 28.546 28.546 1 1.2574 1.1529 0 11275000 4982600 6292400 25690 876 9706 9972 40205 40205 NCSSFLIK 8 1 0 Unmodified _NCSSFLIK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.7472 2 484.747127 967.479702 NaN NaN NaN -0.013607 -6.5958E-06 NaN NaN NaN NaN 56.848 1.8318 56.848 55.597 57.429 3.8147E-06 0 0 0 0.020224 1 31948 65.252 37.727 1 NaN NaN 0 50676000 50676000 0 25691 1572 9707 9973 40206 40206 NCSSFLIK 8 1 0 Unmodified _NCSSFLIK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7543 2 484.747127 967.479702 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.671 1 56.671 56.171 57.171 -3.8147E-06 0 0 0 0.026541 1 31937 64.567 40.381 1 25692 1572 9707 9973 40207 40207 NCSSFLIK 8 1 0 Unmodified _NCSSFLIK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7476 2 484.747127 967.479702 86056.69 0.17959 8.7056E-05 -0.06675 -3.2357E-05 0.11284 5.4699E-05 484.747167803984 488.754010072465 55.554 1.9323 55.554 54.32 56.252 3.8147E-06 536 153 8 0 0 0 0.0058079 2 31716 89.296 54.472 1 0.80804 0.9034 0 105240000 57215000 48027000 25693 1572 9707 9973 40208;40209 40208 NCSSFLIK 8 1 0 Unmodified _NCSSFLIK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.7471 2 484.747127 967.479702 86712.56 0.23154 0.00011224 0.062647 3.0368E-05 0.29419 0.00014261 484.747101234041 488.754091755825 64.991 1.485 64.991 64.188 65.673 0 463 109 6 0 0 0 0.056359 1 33300 41.429 26.654 1 0.85343 0.66191 0 13975000 7020100 6954500 25694 1572 9707 9973 40210 40210 NCTIVSPDAGGAK 13 1 0 Unmodified _NCTIVSPDAGGAK_ 0 0 0 Q53FW2;P60891;B1ALA9 Q53FW2 Q53FW2 PRPS1 Ribose-phosphate pyrophosphokinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.3181 2 645.311351 1288.60815 76037.36 0.39209 0.00025302 0.9473 0.0006113 1.3394 0.00086432 645.814201686517 649.318390225452 37.927 0.4338 37.927 37.708 38.142 0 155 36 6 0 0 0 0.039184 1 16662 31.597 31.597 1 0.75421 0.65192 0 1369700 765020 604630 25695 1626 9708 9974 40211 40211 NDASEVVLAGER 12 0 1 Unmodified _NDASEVVLAGER_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3197 2 630.314948 1258.61534 78400.46 0.56315 0.00035496 0.69794 0.00043992 1.2611 0.00079488 630.315157455836 635.319676433589 51.173 0.68352 51.173 50.76 51.443 0 158 63 4 0 0 0 0.00011706 1 28285 94.791 94.791 1 0.70259 0.71535 0 30018000 17062000 12956000 25696 406 9709 9975 40212 40212 NDASEVVLAGER 12 0 1 Unmodified _NDASEVVLAGER_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.323 2 630.314948 1258.61534 78481.32 0.82928 0.00052271 0.37644 0.00023728 1.2057 0.00075999 630.31503180141 635.319453488494 50.065 0.75425 50.065 49.712 50.467 0 207 67 5 0 0 0 0.00043138 1 28126 71.085 62.864 1 0.5871 0.60684 0 21645000 14489000 7155700 25697 406 9709 9975 40213 40213 NDASEVVLAGER 12 0 1 Unmodified _NDASEVVLAGER_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.3153 2 630.314948 1258.61534 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.12 1 59.12 58.62 59.62 -3.8147E-06 0 0 0 0.027343 1 30137 47.288 35.062 1 25698 406 9709 9975 40214 40214 NDDSLLYK 8 1 0 Unmodified _NDDSLLYK_ 0 0 0 O14646;A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 O14646;A0A024RC75 O14646 CHD1;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.2399 2 484.24019 966.465826 87258.79 0.37522 0.00018169 0.070076 3.3934E-05 0.44529 0.00021563 484.240189516385 488.247241491353 44.244 0.66195 44.244 43.994 44.656 0 150 57 4 0 0 0 0.029249 2 23664 52.716 33.985 1 0.79306 0.81213 0 28449000 15707000 12742000 25699 1366;354 9710 9976 40215;40216 40215 NDEELNKLLGK 11 2 0 Unmodified _NDEELNKLLGK_ 0 0 1 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;B2R5B6 A3KPC7;B2R5B6 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8448 2 636.843342 1271.67213 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.451 1 63.451 62.951 63.951 3.8147E-06 0 0 0 0.01624 1 37303 65.627 44.12 1 25700 312;832 9711 9977 40217 40217 NDFTEEEEAQVR 12 0 1 Unmodified _NDFTEEEEAQVR_ 0 0 0 E5RJR5;P63208 E5RJR5 E5RJR5 SKP1 S-phase kinase-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.8276 2 733.823335 1465.63212 71484.33 0.78955 0.00057939 0.090412 6.6347E-05 0.87996 0.00064574 733.823010621942 738.827746576334 46.234 0.55924 46.234 45.98 46.54 3.8147E-06 233 48 6 0 0 0 1.0473E-17 1 24858 139.43 131.51 1 0.74108 0.75815 0 32620000 15704000 16916000 25701 1215 9712 9978 40218 40218 NDFTEEEEAQVR 12 0 1 Unmodified _NDFTEEEEAQVR_ 0 0 0 E5RJR5;P63208 E5RJR5 E5RJR5 SKP1 S-phase kinase-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.8226 2 733.823335 1465.63212 70987.54 0.6443 0.0004728 0.11101 8.1465E-05 0.75531 0.00055427 733.823019662571 738.827955819951 45.26 0.53225 45.26 45.031 45.563 0 224 46 6 0 0 0 1.2512E-06 1 24816 112.13 104.2 1 0.75536 0.86033 0 49486000 28785000 20701000 25702 1215 9712 9978 40219 40219 NDFTEEEEAQVR 12 0 1 Unmodified _NDFTEEEEAQVR_ 0 0 0 E5RJR5;P63208 E5RJR5 E5RJR5 SKP1 S-phase kinase-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.828 2 733.823335 1465.63212 71872.61 0.52318 0.00038392 0.066768 4.8996E-05 0.58995 0.00043292 733.823279984167 738.827664672158 54.779 0.5487 54.779 54.514 55.063 0 218 41 7 0 0 0 0.00012005 2 26765 94.616 90.318 1 0.54562 0.46096 0 4725500 3113000 1612500 25703 1215 9712 9978 40220;40221 40221 NDGAAILAAVSSIAQK 16 1 0 Unmodified _NDGAAILAAVSSIAQK_ 0 0 0 B4DJ81;E5KRK5;P28331;Q9P1A0 B4DJ81 B4DJ81 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.9281 2 764.920112 1527.82567 NaN NaN NaN 0.45539 0.00034834 NaN NaN NaN NaN 117.78 0.39268 117.78 117.57 117.96 7.6294E-06 0 0 0 3.8533E-06 1 75499 80.96 71.272 1 NaN NaN 0 2676000 0 2676000 25704 986 9713 9979 40222 40222 NDGAAILAAVSSIAQK 16 1 0 Unmodified _NDGAAILAAVSSIAQK_ 0 0 0 B4DJ81;E5KRK5;P28331;Q9P1A0 B4DJ81 B4DJ81 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.9281 2 764.920112 1527.82567 NaN NaN NaN 0.47041 0.00035983 NaN NaN NaN NaN 117.26 0.3272 117.26 117.1 117.42 0 0 0 0 9.1059E-09 1 76870 100.22 86.453 1 NaN NaN 0 2867700 0 2867700 25705 986 9713 9979 40223 40223 NDGVGQISGFYVGR 14 0 1 Unmodified _NDGVGQISGFYVGR_ 0 0 0 Q9BRQ8 Q9BRQ8 Q9BRQ8 AIFM2 Apoptosis-inducing factor 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8677 2 734.862597 1467.71064 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.192 1 85.192 84.692 85.692 0 0 0 0 0.0012613 1 52393 74.76 59.188 1 25706 1998 9714 9980 40224 40224 NDIASHPPVEGSYAPR 16 0 1 Unmodified _NDIASHPPVEGSYAPR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.9178 2 855.415725 1708.8169 67280.33 0.98103 0.00083918 -0.24631 -0.0002107 0.73472 0.00062849 855.415166084712 860.920967123255 45.075 0.57053 45.075 44.809 45.379 0 168 50 5 0 0 0 3.4007E-06 3 24237 112.44 105.55 1 1.2255 1.2537 0 31696000 13664000 18032000 25707 618 9715 9981 40225;40226;40227 40227 NDIASHPPVEGSYAPR 16 0 1 Unmodified _NDIASHPPVEGSYAPR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.2825 3 570.612909 1708.8169 79894.87 0.8295 0.00047333 -0.60183 -0.00034341 0.22768 0.00012991 570.946972490463 573.948799872348 45.1 0.5617 45.1 44.818 45.379 0 222 49 7 0 0 0 1.756E-06 2 24229 87.287 87.287 1 1.4881 1.5198 0 31085000 15070000 16015000 25708 618 9715 9981 40228;40229 40228 NDIASHPPVEGSYAPR 16 0 1 Unmodified _NDIASHPPVEGSYAPR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.9204 2 855.415725 1708.8169 66431.57 1.41 0.0012062 -0.0035822 -3.0643E-06 1.4065 0.0012031 855.416119554203 860.419779882206 43.946 0.45697 43.946 43.683 44.14 0 149 38 5 0 0 0 0.00020334 1 23820 60.157 60.157 1 1.2485 1.3647 0 36067000 16012000 20055000 25709 618 9715 9981 40230 40230 NDIASHPPVEGSYAPR 16 0 1 Unmodified _NDIASHPPVEGSYAPR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.9488 3 570.612909 1708.8169 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.826 1 43.826 43.326 44.326 0 0 0 0 0.0023268 1 23869 60.307 49.045 1 25710 618 9715 9981 40231 40231 NDIHTLLK 8 1 0 Unmodified _NDIHTLLK_ 0 0 0 H0YAL7;D6RBD7;C9J1V9;O43324;H0YAH9 H0YAL7 H0YAL7 EEF1E1;EEF1E1-BLOC1S5 Eukaryotic translation elongation factor 1 epsilon-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.2815 2 477.274367 952.53418 NaN NaN NaN 0.3574 0.00017058 NaN NaN NaN NaN 40.532 0.33313 40.532 40.297 40.631 0 0 0 0 0.0011132 1 21177 113.74 55.135 1 NaN NaN 0 14141000 0 14141000 25711 1127 9716 9982 40232 40232 NDKPSPNSENEQNSVTLEVLLVK 23 2 0 Unmodified _NDKPSPNSENEQNSVTLEVLLVK_ 0 0 1 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 857.7822 3 852.104685 2553.29223 67047.46 1.0993 0.00093676 0.39791 0.00033906 1.4973 0.0012758 852.43956109044 857.781986154769 113.53 0.37814 113.53 113.41 113.79 0 89 17 7 0 0 0 0.025716 1 66190 19.25 19.25 1 1.9749 1.7082 0 3976000 1346700 2629300 25712 1336 9717 9983 40233 40233 NDLAVVDVR 9 0 1 Unmodified _NDLAVVDVR_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.7788 2 500.774731 999.534909 84570.54 0.30561 0.00015304 0.26773 0.00013407 0.57334 0.00028711 500.77470229574 505.778957642537 64.187 1.5193 64.187 63.703 65.223 0 607 136 6 0 0 0 0.00036634 4 36736 100.57 36.673 1 0.96291 1.1214 0 188090000 94242000 93852000 25713 151 9718 9984 40234;40235;40236;40237 40235 NDLAVVDVR 9 0 1 Unmodified _NDLAVVDVR_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.7787 2 500.774731 999.534909 84606.85 0.11978 5.9984E-05 0.32768 0.00016409 0.44746 0.00022408 500.774755902002 505.778920465023 62.912 1.6268 62.912 62.48 64.106 0 585 143 7 0 0 0 0.00045529 4 36831 99.013 32.714 1 1.0063 1.1485 0 144490000 70824000 73670000 25714 151 9718 9984 40238;40239;40240;40241 40239 NDLAVVDVR 9 0 1 Unmodified _NDLAVVDVR_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.7744 2 500.774731 999.534909 NaN NaN NaN -0.38596 -0.00019328 NaN NaN NaN NaN 73.631 1.1022 73.631 73.104 74.206 0 0 0 0 0.021702 1 38922 57.55 18.528 1 NaN NaN 0 8666200 8666200 0 25715 151 9718 9984 40242 40242 NDLAVVDVR 9 0 1 Unmodified _NDLAVVDVR_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.7741 2 500.774731 999.534909 NaN NaN NaN -0.25862 -0.00012951 NaN NaN NaN NaN 74.019 0.95099 74.019 73.588 74.539 0 0 0 0 0.0064242 1 38347 72.325 24.456 1 NaN NaN 0 8972800 8972800 0 25716 151 9718 9984 40243 40243 NDLSPASSGNAVYDFFIGR 19 0 1 Unmodified _NDLSPASSGNAVYDFFIGR_ 0 0 0 Q14739;A0A024R3R5 Q14739 Q14739 LBR Lamin-B receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1020.9915 2 1015.48434 2028.95412 59716.99 0.36868 0.00037438 0.035344 3.5891E-05 0.40402 0.00041028 1015.48402823384 1020.99131634838 122.19 0.53943 122.19 121.99 122.53 0 194 38 8 0 0 0 2.0728E-06 2 79168 84.566 84.566 1 1.3238 1.3527 0 18901000 8430300 10470000 25717 1743 9719 9985 40244;40245 40245 NDLSPASSGNAVYDFFIGR 19 0 1 Unmodified _NDLSPASSGNAVYDFFIGR_ 0 0 0 Q14739;A0A024R3R5 Q14739 Q14739 LBR Lamin-B receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1015.9866 2 1015.48434 2028.95412 59885.11 0.34495 0.00035029 -0.082431 -8.3708E-05 0.26252 0.00026658 1015.98478201242 1020.48800446207 121.76 0.51356 121.76 121.46 121.98 0 162 37 5 0 0 0 6.1882E-12 2 80644 103.76 103.76 1 1.4448 1.5296 0 23700000 11105000 12595000 25718 1743 9719 9985 40246;40247 40247 NDLSPTTVMSEGAR 14 0 1 Oxidation (M) _NDLSPTTVM(ox)SEGAR_ NDLSPTTVM(1)SEGAR NDLSPTTVM(80.69)SEGAR 0 1 0 V9HWI1;P30043;M0QZL1;M0R192 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.8546 2 747.348662 1492.68277 NaN NaN NaN 0.10024 7.4918E-05 NaN NaN NaN NaN 40.666 0.48565 40.666 40.428 40.914 0 0 0 0 9.7312E-05 1 21301 80.69 71.202 1 NaN NaN 0 8418100 0 8418100 25719 1528 9720 9986 40248 40248 1295 NDLSPTTVMSEGAR 14 0 1 Oxidation (M) _NDLSPTTVM(ox)SEGAR_ NDLSPTTVM(1)SEGAR NDLSPTTVM(117.09)SEGAR 0 1 0 V9HWI1;P30043;M0QZL1;M0R192 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.3535 2 747.348662 1492.68277 71661.91 0.92316 0.00068992 -0.58858 -0.00043987 0.33458 0.00025005 747.849588923744 752.352662135632 39.895 0.4792 39.895 39.562 40.041 0 86 40 4 0 0 0 1.0929E-09 1 21170 117.09 106.57 1 3.8572 3.8208 0 12208000 3369500 8838200 25720 1528 9720 9986 40249 40249 1295 NDLYYNTITNFSEK 14 1 0 Unmodified _NDLYYNTITNFSEK_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;Q05DQ5;Q05DF7;Q05BZ6 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.4052 2 861.404492 1720.79443 65159.73 0.76895 0.00066238 -1.0111 -0.000871 -0.24219 -0.00020863 861.905639187545 865.409031384501 92.406 0.46692 92.406 92.202 92.669 0 112 45 5 0 0 0 9.6448E-05 1 55959 85.845 81.145 1 0.54397 0.56694 0 11683000 6496500 5186100 25721 512 9721 9987 40250 40250 NDLYYNTITNFSEK 14 1 0 Unmodified _NDLYYNTITNFSEK_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;Q05DQ5;Q05DF7;Q05BZ6 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.4045 2 861.404492 1720.79443 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.754 1 91.754 91.254 92.254 0 0 0 0 1.3651E-07 1 56821 107.18 84.643 1 25722 512 9721 9987 40251 40251 NDLYYNTITNFSEK 14 1 0 Unmodified _NDLYYNTITNFSEK_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;Q05DQ5;Q05DF7;Q05BZ6 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 865.411 2 861.404492 1720.79443 66659.93 0.58609 0.00050486 -0.040058 -3.4506E-05 0.54603 0.00047036 861.404521567602 865.409914787149 105.84 0.4406 105.84 105.6 106.04 0 89 23 6 0 0 0 0.0069332 1 60441 41.242 35.397 1 0.84233 0.6734 0 2904900 1553300 1351600 25723 512 9721 9987 40252 40252 NDMDEPPSGDFGGDEEK 17 1 0 Oxidation (M) _NDM(ox)DEPPSGDFGGDEEK_ NDM(1)DEPPSGDFGGDEEK NDM(75.09)DEPPSGDFGGDEEK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.8604 2 927.85216 1853.68977 63586.32 0.65517 0.0006079 -0.17129 -0.00015893 0.48388 0.00044897 927.852033996217 931.859242190123 39.431 0.86804 39.431 39.068 39.936 0 458 70 8 0 0 0 3.0591E-05 4 20715 75.088 75.088 1 0.96047 1.0605 0 56719000 29270000 27449000 25724 515 9722 9988 40253;40254;40255;40256 40256 377 NDMDEPPSGDFGGDEEK 17 1 0 Oxidation (M) _NDM(ox)DEPPSGDFGGDEEK_ NDM(1)DEPPSGDFGGDEEK NDM(93.01)DEPPSGDFGGDEEK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.8599 2 927.85216 1853.68977 63088.47 0.44425 0.00041219 0.03491 3.2391E-05 0.47916 0.00044459 927.852264279643 931.859401271249 38.595 0.88463 38.595 38.179 39.064 0 475 75 9 0 0 0 3.7639E-07 2 20074 93.011 93.011 1 0.9474 1.0683 0 61978000 32487000 29491000 25725 515 9722 9988 40257;40258 40258 377 NDNDTFTVK 9 1 0 Unmodified _NDNDTFTVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.2524 2 527.246003 1052.47745 NaN NaN NaN -0.27181 -0.00014331 NaN NaN NaN NaN 31.865 0.31316 31.865 31.705 32.019 0 0 0 0 0.0011661 1 15811 87.639 62.745 1 NaN NaN 0 15240000 0 15240000 25726 1504 9723 9989 40259 40259 NDNDTFTVK 9 1 0 Unmodified _NDNDTFTVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 531.2523 2 527.246003 1052.47745 NaN NaN NaN -0.48941 -0.00025804 NaN NaN NaN NaN 36.595 0.27745 36.595 36.442 36.72 0 0 0 0 0.042581 1 16395 49.418 35.839 1 NaN NaN 0 1281800 0 1281800 25727 1504 9723 9989 40260 40260 NDPEITINVPQSSK 14 1 0 Unmodified _NDPEITINVPQSSK_ 0 0 0 B4DYU9;A0A024R411;Q13416 B4DYU9 B4DYU9 ORC2L;ORC2 Origin recognition complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.3947 2 771.393927 1540.7733 72647.98 0.29393 0.00022674 0.33272 0.00025666 0.62665 0.0004834 771.895643998407 775.401311480761 72.525 0.44454 72.525 72.219 72.664 0 107 32 6 0 0 0 0.0072394 2 42432 40.725 40.725 1 1.9011 1.9733 0 12533000 4957900 7575200 25728 146 9724 9990 40261;40262 40262 NDPEITINVPQSSK 14 1 0 Unmodified _NDPEITINVPQSSK_ 0 0 0 B4DYU9;A0A024R411;Q13416 B4DYU9 B4DYU9 ORC2L;ORC2 Origin recognition complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.3946 2 771.393927 1540.7733 72643.64 0.30616 0.00023617 0.32151 0.00024801 0.62768 0.00048418 771.394493380604 775.400992417931 71.374 0.36198 71.374 71.225 71.587 0 70 27 4 0 0 0 0.0032704 1 42858 47.429 32.75 1 1.3962 1.455 0 11034000 4207000 6827000 25729 146 9724 9990 40263 40263 NDPEITINVPQSSK 14 1 0 Unmodified _NDPEITINVPQSSK_ 0 0 0 B4DYU9;A0A024R411;Q13416 B4DYU9 B4DYU9 ORC2L;ORC2 Origin recognition complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.4016 2 771.393927 1540.7733 70363.5 0.61217 0.00047223 0.16993 0.00013108 0.7821 0.00060331 771.393759979424 775.401299107791 82.926 0.56559 82.926 82.643 83.209 0 161 34 6 0 0 0 0.019644 1 45056 34.05 28.39 1 1.4139 1.105 0 3820100 1608800 2211300 25730 146 9724 9990 40264 40264 NDPEITINVPQSSK 14 1 0 Unmodified _NDPEITINVPQSSK_ 0 0 0 B4DYU9;A0A024R411;Q13416 B4DYU9 B4DYU9 ORC2L;ORC2 Origin recognition complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 771.3939 2 771.393927 1540.7733 70536.82 0.7484 0.00057731 -0.36404 -0.00028082 0.38436 0.00029649 771.3933549884 775.400774124353 83.165 0.61875 83.165 82.828 83.447 0 138 35 6 0 0 0 0.0076014 2 44399 40.113 40.113 1 1.4716 1.1507 0 3707100 1539500 2167500 25731 146 9724 9990 40265;40266 40266 NDQCYDDIR 9 0 1 Unmodified _NDQCYDDIR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.7473 2 599.743302 1197.47205 78556.67 0.95784 0.00057446 -0.13895 -8.3335E-05 0.81889 0.00049112 599.743214690384 604.747362572857 28.693 0.36803 28.693 28.498 28.866 0 90 20 7 0 0 0 7.7315E-08 2 13579 142.04 136.68 1 2.7866 2.9928 0 46868000 12130000 34738000 25732 340 9725 9991 40267;40268 40267 NDQCYDDIR 9 0 1 Unmodified _NDQCYDDIR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.7475 2 599.743302 1197.47205 77974.88 0.55146 0.00033074 0.012786 7.6685E-06 0.56425 0.0003384 599.743290517912 604.747539439429 28.046 0.30159 28.046 27.871 28.172 0 91 17 7 0 0 0 8.242E-08 2 13218 141.48 136.11 1 2.9304 3.3804 0 55034000 14495000 40539000 25733 340 9725 9991 40269;40270 40269 NDVFYLQPER 10 0 1 Unmodified _NDVFYLQPER_ 0 0 0 A6NHB5;Q14202;A6NHN7;Q5VZL5;H7C1I7 A6NHB5;Q5VZL5 Q5VZL5 ZMYM3;ZMYM4 Zinc finger MYM-type protein 3;Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.8217 2 640.817127 1279.6197 76343.77 0.37397 0.00023965 0.081568 5.227E-05 0.45554 0.00029192 640.817177140588 645.821307763009 89.542 0.58414 89.542 89.228 89.813 -7.6294E-06 142 37 5 0 0 0 0.010853 1 48623 52.79 45.894 1 2.0852 1.8406 0 2448400 869210 1579100 25734 1835;681 9726 9992 40271 40271 NDVMNLLESAGFSR 14 0 1 Unmodified _NDVMNLLESAGFSR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 782.3821 2 776.874847 1551.73514 NaN NaN NaN 0.41286 0.00032074 NaN NaN NaN NaN 131.45 0.36029 131.45 131.26 131.62 0 0 0 0 0.0032317 1 78843 62.89 48.471 1 NaN NaN 0 1055800 0 1055800 25735 803 9727 9993 40272 40272 NDWLDLR 7 0 1 Unmodified _NDWLDLR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.2392 2 466.235242 930.45593 88824.26 0.54954 0.00025622 0.15726 7.332E-05 0.7068 0.00032954 466.235267448451 471.239333539877 86.942 0.30267 86.942 86.751 87.053 0 102 20 7 0 0 0 0.026832 2 52400 80.229 64.075 1 0.80731 0.90794 0 95431000 55906000 39525000 25736 1859 9728 9994 40273;40274 40274 NDWLDLR 7 0 1 Unmodified _NDWLDLR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2358 2 466.235242 930.45593 87776.29 0.54908 0.000256 0.32643 0.00015219 0.87551 0.00040819 466.235310563203 471.239395671395 85.836 0.24352 85.836 85.704 85.948 0 85 16 7 0 0 0 0.015113 2 52845 99.375 83.221 1 0.79563 0.90959 0 155690000 88844000 66850000 25737 1859 9728 9994 40275;40276 40275 NDWLDLR 7 0 1 Unmodified _NDWLDLR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.235 2 466.235242 930.45593 89521.66 0.28862 0.00013457 0.1431 6.6717E-05 0.43172 0.00020128 466.235212332633 471.239339674957 99.083 0.58055 99.083 98.691 99.271 0 143 33 6 0 0 0 0.032107 1 55110 66.073 49.919 1 1.1847 1.0212 0 4398000 1915000 2482900 25738 1859 9728 9994 40277 40277 NDWTNPEINK 10 1 0 Unmodified _NDWTNPEINK_ 0 0 0 M0R1B0;Q53Y03;O43402 M0R1B0 M0R1B0 EMC8;COX4NB ER membrane protein complex subunit 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.799 2 615.791109 1229.56767 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.073 1 49.073 48.573 49.573 0 0 0 0 0.05036 1 26872 44.318 25.538 1 25739 1355 9729 9995 40278 40278 NEAPEGNLGDFAEFQR 16 0 1 Unmodified _NEAPEGNLGDFAEFQR_ 0 0 0 Q9UKN8;Q05CN7 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.4119 2 897.408097 1792.80164 64870.81 0.80856 0.00072561 -0.026521 -2.38E-05 0.78204 0.00070181 897.909589561946 902.412483668609 91.103 0.73888 91.103 90.709 91.448 0 274 62 6 0 0 0 3.9707E-06 3 56455 87.498 87.498 1 0.86527 0.91561 0 23654000 13971000 9682600 25740 2107 9730 9996 40279;40280;40281 40281 NEAPEGNLGDFAEFQR 16 0 1 Unmodified _NEAPEGNLGDFAEFQR_ 0 0 0 Q9UKN8;Q05CN7 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 897.9106 2 897.408097 1792.80164 64598.94 0.46762 0.00041965 0.44335 0.00039787 0.91097 0.00081752 897.909970406094 902.412143610984 105.13 0.56791 105.13 104.83 105.4 0 207 34 9 0 0 0 0.0071774 2 59954 35.037 35.037 1 1.292 1.1097 0 8058500 3555600 4502900 25741 2107 9730 9996 40282;40283 40283 NEAPEGNLGDFAEFQR 16 0 1 Unmodified _NEAPEGNLGDFAEFQR_ 0 0 0 Q9UKN8;Q05CN7 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 897.9091 2 897.408097 1792.80164 63962.29 0.19031 0.00017079 0.4551 0.00040841 0.64542 0.0005792 897.40870877085 902.412189009034 105.02 0.59274 105.02 104.65 105.24 -7.6294E-06 188 36 8 0 0 0 3.6394E-06 2 58925 88.552 88.552 1 1.0949 0.91158 0 7115500 2842800 4272700 25742 2107 9730 9996 40284;40285 40285 NEAQEEIYK 9 1 0 Unmodified _NEAQEEIYK_ 0 0 0 Q5T0F3;Q13823;B4DPI9 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.2739 2 562.266936 1122.51932 NaN NaN NaN -1.7155 -0.00096459 NaN NaN NaN NaN 26.58 0.5364 26.58 26.267 26.804 0 0 0 0 0.0034102 1 11981 78.516 63.842 1 NaN NaN 0 18227000 0 18227000 25743 1721 9731 9997 40286 40286 NEAQEEIYKK 10 2 0 Unmodified _NEAQEEIYKK_ 0 0 1 Q5T0F3;Q13823;B4DPI9 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.3301 2 626.314417 1250.61428 77001.16 0.59845 0.00037482 -0.084989 -5.323E-05 0.51346 0.00032159 626.314346000893 634.328911220715 19.719 0.31494 19.719 19.58 19.894 0 62 19 6 0 0 0 4.7843E-08 1 6213 120.15 107.12 1 1.32 1.5218 0 9533000 3960000 5572900 25744 1721 9732 9998 40287 40287 NEAQEEIYKK 10 2 0 Unmodified _NEAQEEIYKK_ 0 0 1 Q5T0F3;Q13823;B4DPI9 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.3144 2 626.314417 1250.61428 76850.53 0.27894 0.0001747 -0.046403 -2.9063E-05 0.23254 0.00014564 626.314176336707 634.32868942918 19.379 0.29747 19.379 19.252 19.549 -1.9073E-06 38 11 5 0 0 0 1.4236E-16 2 5829 172.98 141.75 1 1.1419 1.3062 0 17160000 8434200 8725500 25745 1721 9732 9998 40288;40289 40288 NEAQEEIYKK 10 2 0 Unmodified _NEAQEEIYKK_ 0 0 1 Q5T0F3;Q13823;B4DPI9 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.3295 2 626.314417 1250.61428 75938.35 0.12144 7.6057E-05 0.47672 0.00029858 0.59816 0.00037463 626.314573365554 634.328848438584 20.822 0.38505 20.822 20.674 21.059 0 69 18 6 0 0 0 0.0025622 2 5608 74.376 74.376 1 1.3457 1.1548 0 3894800 1670000 2224800 25746 1721 9732 9998 40290;40291 40290 NEATVETLTETK 12 1 0 Unmodified _NEATVETLTETK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03;A0A087WXU8;Q7Z4X3;Q7Z4W0;B4DGI6 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3365 2 668.335546 1334.65654 NaN NaN NaN -0.16333 -0.00010916 NaN NaN NaN NaN 47.712 0.24103 47.712 47.55 47.791 0 0 0 0 0.0073952 1 25855 58.592 29.431 1 NaN NaN 0 12106000 12106000 0 25747 993 9733 9999 40292 40292 NEATVETLTETK 12 1 0 Unmodified _NEATVETLTETK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03;A0A087WXU8;Q7Z4X3;Q7Z4W0;B4DGI6 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3353 2 668.335546 1334.65654 74600.09 0.77044 0.00051491 -0.011387 -7.6106E-06 0.75906 0.0005073 668.335488671033 672.342783316109 46.738 0.54131 46.738 46.448 46.989 0 192 46 6 0 0 0 0.00072982 1 25775 66.663 66.663 1 0.72643 0.75573 0 24563000 14058000 10505000 25748 993 9733 9999 40293 40293 NEATVETLTETK 12 1 0 Unmodified _NEATVETLTETK_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03;A0A087WXU8;Q7Z4X3;Q7Z4W0;B4DGI6 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.3357 2 668.335546 1334.65654 76568 0.60385 0.00040358 -0.039874 -2.6649E-05 0.56398 0.00037693 668.33517291164 672.342406387908 55.349 0.57417 55.349 55.097 55.671 -3.8147E-06 164 37 6 0 0 0 0.01851 1 27652 40.727 40.727 1 0.87684 0.69248 0 5269400 2523700 2745800 25749 993 9733 9999 40294 40294 NEDEEEEEEEKDEAEDLLGR 20 1 1 Unmodified _NEDEEEEEEEKDEAEDLLGR_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.0093 3 803.00162 2405.98303 67716.48 0.88039 0.00070696 -0.11142 -8.9473E-05 0.76897 0.00061748 803.335861431125 809.343340721092 76.056 1.5369 76.056 75.58 77.117 0 978 130 12 0 0 0 1.3989E-31 3 45060 146.1 145.57 1 0.70734 0.85958 0 424070000 245430000 178640000 25750 2148 9734 10000 40295;40296;40297 40297 NEDEEEEEEEKDEAEDLLGR 20 1 1 Unmodified _NEDEEEEEEEKDEAEDLLGR_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.3362 3 803.00162 2405.98303 67802.52 0.47366 0.00038035 0.1128 9.0577E-05 0.58646 0.00047093 803.336003052558 809.343554201557 75.109 1.4934 75.109 74.523 76.016 0 1121 134 12 0 0 0 7.8755E-24 4 45121 132.13 132.13 1 0.69892 0.83179 0 477140000 279590000 197550000 25751 2148 9734 10000 40298;40299;40300;40301 40299 NEDEEEEEEEKDEAEDLLGR 20 1 1 Unmodified _NEDEEEEEEEKDEAEDLLGR_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.3362 3 803.00162 2405.98303 67699.64 0.57633 0.00046279 0.037538 3.0143E-05 0.61387 0.00049294 803.336048292505 809.343308886313 87.827 1.6758 87.827 87.413 89.089 -7.6294E-06 833 106 15 0 0 0 4.4498E-10 4 48217 98.816 98.816 1 0.93987 0.85566 0 191900000 99006000 92894000 25752 2148 9734 10000 40302;40303;40304;40305 40303 NEDEEEEEEEKDEAEDLLGR 20 1 1 Unmodified _NEDEEEEEEEKDEAEDLLGR_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.3354 3 803.00162 2405.98303 66805.36 0.49973 0.00040128 0.17539 0.00014084 0.67512 0.00054212 803.336190467699 809.009188995683 88.024 1.3451 88.024 87.618 88.963 0 708 80 15 0 0 0 1.4204E-06 4 47524 62.362 62.362 1 0.96452 0.82622 0 145070000 73888000 71186000 25753 2148 9734 10000 40306;40307;40308;40309 40307 NEDITEPQSILAAAEK 16 1 0 Unmodified _NEDITEPQSILAAAEK_ 0 0 0 Q2NLC8;E9PFN5;Q6FII1;Q9Y2Q3 Q2NLC8 Q2NLC8 GSTK1;LOC51064 Glutathione S-transferase kappa 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.944 2 864.936156 1727.85776 66551.64 0.99795 0.00086316 -0.1311 -0.00011339 0.86685 0.00074977 865.438063691013 868.943011746208 98.462 0.64597 98.462 98.101 98.747 0 216 53 7 0 0 0 0.00038625 2 60312 51.211 51.211 1 2.0923 2.0672 0 25575000 7009100 18566000 25754 1234 9735 10001 40310;40311 40311 NEDITEPQSILAAAEK 16 1 0 Unmodified _NEDITEPQSILAAAEK_ 0 0 0 Q2NLC8;E9PFN5;Q6FII1;Q9Y2Q3 Q2NLC8 Q2NLC8 GSTK1;LOC51064 Glutathione S-transferase kappa 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.9422 2 864.936156 1727.85776 67271.68 0.39159 0.0003387 0.34875 0.00030164 0.74034 0.00064035 864.936615569098 868.943372214946 97.747 0.61494 97.747 97.436 98.051 -7.6294E-06 191 48 6 0 0 0 0.00045028 2 61295 49.423 49.423 1 2.3713 2.4581 0 18759000 6441800 12317000 25755 1234 9735 10001 40312;40313 40313 NEDITEPQSILAAAEK 16 1 0 Unmodified _NEDITEPQSILAAAEK_ 0 0 0 Q2NLC8;E9PFN5;Q6FII1;Q9Y2Q3 Q2NLC8 Q2NLC8 GSTK1;LOC51064 Glutathione S-transferase kappa 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 864.9349 2 864.936156 1727.85776 66637.31 0.71757 0.00062065 -0.53602 -0.00046362 0.18155 0.00015703 864.935467545341 868.942991377448 111.44 0.61989 111.44 111.1 111.72 0 96 28 6 0 0 0 0.0065851 1 64547 45.915 42.693 1 1.0939 0.86674 0 4864900 2663000 2201900 25756 1234 9735 10001 40314 40314 NEDITEPQSILAAAEK 16 1 0 Unmodified _NEDITEPQSILAAAEK_ 0 0 0 Q2NLC8;E9PFN5;Q6FII1;Q9Y2Q3 Q2NLC8 Q2NLC8 GSTK1;LOC51064 Glutathione S-transferase kappa 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 864.9359 2 864.936156 1727.85776 66403.11 0.42304 0.00036591 -0.59978 -0.00051877 -0.17673 -0.00015286 864.935652950168 868.943140365805 111.36 0.48981 111.36 111.07 111.56 0 84 21 6 0 0 0 0.027747 1 63551 32.275 28.851 1 1.1593 0.94576 0 6056300 2475100 3581200 25757 1234 9735 10001 40315 40315 NEDNIMTAQNVPLK 14 1 0 Oxidation (M) _NEDNIM(ox)TAQNVPLK_ NEDNIM(1)TAQNVPLK NEDNIM(107.09)TAQNVPLK 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.9012 2 801.893237 1601.77192 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.878 1 54.878 54.378 55.378 -3.8147E-06 0 0 0 7.004E-08 1 30865 107.09 93.5 1 25758 1681 9736 10002 40316 40316 1496 NEDNIMTAQNVPLK 14 1 0 Oxidation (M) _NEDNIM(ox)TAQNVPLK_ NEDNIM(1)TAQNVPLK NEDNIM(57.17)TAQNVPLK 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.8923 2 801.893237 1601.77192 NaN NaN NaN -2.2709 -0.001821 NaN NaN NaN NaN 54.114 0.27008 54.114 53.921 54.191 3.8147E-06 0 0 0 0.0015145 1 30840 57.175 46.01 1 NaN NaN 0 5496100 5496100 0 25759 1681 9736 10002 40317 40317 1496 NEDRGEEEAESSISSTSNEQLK 22 1 1 Unmodified _NEDRGEEEAESSISSTSNEQLK_ 0 0 1 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.6975 3 813.696643 2438.0681 68289.23 1.0227 0.00083215 -0.15945 -0.00012975 0.86322 0.0007024 814.030604141903 819.704015088681 41.507 0.39633 41.507 41.289 41.685 0 136 32 6 0 0 0 6.7285E-09 2 22299 76.156 75.571 1 1.2104 1.3828 0 21241000 11346000 9895200 25760 1758 9737 10003 40318;40319 40319 NEDRGEEEAESSISSTSNEQLK 22 1 1 Unmodified _NEDRGEEEAESSISSTSNEQLK_ 0 0 1 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 814.0321 3 813.696643 2438.0681 66664.76 0.47932 0.00039002 0.40128 0.00032652 0.88059 0.00071654 814.031267042975 820.0388113848 50.817 0.56371 50.817 50.566 51.129 0 209 36 8 0 0 0 0.001811 2 24978 27.946 27.946 1 1.8239 1.5194 0 6184900 2276200 3908800 25761 1758 9737 10003 40320;40321 40321 NEDRGEEEAESSISSTSNEQLK 22 1 1 Unmodified _NEDRGEEEAESSISSTSNEQLK_ 0 0 1 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;Q6PJR5;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.0396 3 813.696643 2438.0681 67617.38 0.42611 0.00034673 0.25437 0.00020698 0.68048 0.0005537 814.031183276762 819.704255070172 51.546 0.6069 51.546 51.276 51.883 3.8147E-06 222 41 8 0 0 0 2.8958E-08 2 24807 66.467 66.402 1 1.6967 1.4204 0 5727500 1881700 3845800 25762 1758 9737 10003 40322;40323 40323 NEEDAAELVALAQAVNAR 18 0 1 Unmodified _NEEDAAELVALAQAVNAR_ 0 0 0 A0A024R1A3;P22314 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 947.4805 2 942.476511 1882.93847 NaN NaN NaN -0.19997 -0.00018846 NaN NaN NaN NaN 118 0.55423 118 117.74 118.3 0 0 0 0 2.3682E-80 1 75608 183.81 161.08 1 NaN NaN 0 9890100 0 9890100 25763 74 9738 10004 40324 40324 NEENTEPGAESSENADDPNK 20 1 0 Unmodified _NEENTEPGAESSENADDPNK_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;Q5CZA7;B4DF66;B3KM87;B4DRS1;Q9H4N1;Q68E03 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542;DKFZp686L22104 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1077.9432 2 1073.9358 2145.85704 61265.86 0.15367 0.00016503 -0.33802 -0.00036301 -0.18435 -0.00019798 1074.93709749545 1077.94315592371 19.072 0.14819 19.072 18.987 19.135 0 32 8 6 0 0 0 4.3641E-07 1 5547 83.499 83.499 1 1.7733 1.7792 0 6904200 2067700 4836500 25764 542 9739 10005 40325 40325 NEEPSEEEIDAPK 13 1 0 Unmodified _NEEPSEEEIDAPK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3334 2 743.830825 1485.6471 70578.68 0.71899 0.0005348 0.21044 0.00015653 0.92942 0.00069133 743.830839387053 747.838025088068 38.486 0.42259 38.486 38.293 38.716 0 200 35 8 0 0 0 3.2847E-19 3 19758 147.74 136.58 1 1.0967 1.1965 0 50287000 23086000 27201000 25765 2065 9740 10006 40326;40327;40328 40328 NEEPSEEEIDAPK 13 1 0 Unmodified _NEEPSEEEIDAPK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.8306 2 743.830825 1485.6471 71305.87 0.46484 0.00034576 0.37721 0.00028058 0.84205 0.00062634 743.830932791164 747.838443558766 37.503 0.5393 37.503 37.332 37.871 0 225 43 7 0 0 0 8.2127E-19 2 19471 143.5 130.41 1 1.0088 1.1142 0 44470000 19111000 25359000 25766 2065 9740 10006 40329;40330 40330 NEEPSEEEIDAPK 13 1 0 Unmodified _NEEPSEEEIDAPK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.8312 2 743.830825 1485.6471 70529.75 0.75149 0.00055898 -0.14519 -0.000108 0.6063 0.00045098 743.830596060395 747.838021805973 44.645 0.55087 44.645 44.351 44.902 0 221 41 8 0 0 0 0.0022588 2 21186 54.486 50.332 1 1.6274 1.2839 0 5943200 2349400 3593800 25767 2065 9740 10006 40331;40332 40332 NEEPSEEEIDAPKPK 15 2 0 Unmodified _NEEPSEEEIDAPKPK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.4161 2 856.404689 1710.79482 66311.02 0.64958 0.0005563 -0.13703 -0.00011736 0.51255 0.00043895 856.404827201174 864.418584503132 32.706 0.47238 32.706 32.42 32.893 0 244 42 7 0 0 0 2.2764E-09 2 16133 128.28 128.28 1 1.1029 1.3019 0 66488000 33826000 32663000 25768 2065 9741 10007 40333;40334 40333 NEEPSEEEIDAPKPK 15 2 0 Unmodified _NEEPSEEEIDAPKPK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.6068 3 571.272218 1710.79482 79373.45 0.49062 0.00028028 -0.30194 -0.00017249 0.18868 0.00010779 571.272101613151 576.614906114491 32.682 0.5188 32.682 32.42 32.939 0 285 47 8 0 0 0 5.3009E-08 2 16186 110.35 110.35 1 1.0918 1.2885 0 97459000 44160000 53299000 25769 2065 9741 10007 40335;40336 40336 NEEPSEEEIDAPKPK 15 2 0 Unmodified _NEEPSEEEIDAPKPK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.271 3 571.272218 1710.79482 79803.37 0.71032 0.00040579 -0.46515 -0.00026573 0.24517 0.00014006 571.271944862726 576.949041563245 31.907 0.44943 31.907 31.736 32.185 -1.9073E-06 247 41 8 0 0 0 3.9906E-06 3 15802 94.017 94.017 1 1.1551 1.3403 0 87139000 41880000 45259000 25770 2065 9741 10007 40337;40338;40339 40337 NEEPSEEEIDAPKPK 15 2 0 Unmodified _NEEPSEEEIDAPKPK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.9065 2 856.404689 1710.79482 66144.05 0.72597 0.00062173 -0.19542 -0.00016736 0.53055 0.00045436 856.4045615733 864.418679290098 31.927 0.42159 31.927 31.736 32.158 0 206 38 8 0 0 0 1.3577E-14 2 15884 150.06 150.06 1 1.0234 1.1848 0 48746000 27479000 21267000 25771 2065 9741 10007 40340;40341 40341 NEEPSEEEIDAPKPK 15 2 0 Unmodified _NEEPSEEEIDAPKPK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.6151 3 571.272218 1710.79482 79195.35 0.4803 0.00027438 -0.1728 -9.8716E-05 0.3075 0.00017566 571.272242555376 576.614896951432 37.962 0.94576 37.962 37.658 38.604 0 438 73 10 0 0 0 2.3288E-07 2 17084 102.38 102.38 1 1.575 1.3368 0 48544000 18420000 30124000 25772 2065 9741 10007 40342;40343 40342 NEEPSEEEIDAPKPK 15 2 0 Unmodified _NEEPSEEEIDAPKPK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 856.4051 2 856.404689 1710.79482 65552.41 0.54661 0.00046812 -0.15379 -0.00013171 0.39282 0.00033641 856.905964093066 864.41878180459 37.95 0.5873 37.95 37.674 38.261 0 348 49 9 0 0 0 9.0174E-05 1 17101 105.17 105.17 1 1.5107 1.2859 0 27725000 11395000 16330000 25773 2065 9741 10007 40344 40344 NEEPSEEEIDAPKPK 15 2 0 Unmodified _NEEPSEEEIDAPKPK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.6155 3 571.272218 1710.79482 78562.63 0.24093 0.00013763 0.19251 0.00010997 0.43343 0.00024761 571.272425154603 576.615090242934 38.156 0.83905 38.156 37.866 38.705 0 418 65 10 0 0 0 6.7678E-05 2 16730 79.652 79.652 1 1.5766 1.3433 0 45425000 17110000 28315000 25774 2065 9741 10007 40345;40346 40345 NEEPSEEEIDAPKPK 15 2 0 Unmodified _NEEPSEEEIDAPKPK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 856.9069 2 856.404689 1710.79482 65269.58 0.28825 0.00024686 0.18547 0.00015883 0.47372 0.00040569 856.404848424646 864.419136537822 38.166 0.65574 38.166 37.881 38.536 0 305 51 10 0 0 0 8.5667E-05 1 16742 107.85 107.85 1 1.6384 1.3913 0 25670000 11041000 14629000 25775 2065 9741 10007 40347 40347 NEESVLLFTQIK 12 1 0 Unmodified _NEESVLLFTQIK_ 0 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.8941 2 710.887749 1419.76095 NaN NaN NaN -2.4787 -0.0017621 NaN NaN NaN NaN 120.32 0.65482 120.32 119.92 120.57 7.6294E-06 0 0 0 0.0014749 1 71375 77.64 40.165 1 NaN NaN 0 4847500 0 4847500 25776 1681 9742 10008 40348 40348 NEESVLLFTQIK 12 1 0 Unmodified _NEESVLLFTQIK_ 0 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.888 2 710.887749 1419.76095 NaN NaN NaN 0.095923 6.8191E-05 NaN NaN NaN NaN 120.34 0.48698 120.34 120.13 120.62 0 0 0 0 0.00083464 1 71385 84.687 58.303 1 NaN NaN 0 4542600 4542600 0 25777 1681 9742 10008 40349 40349 NEESVLLFTQIK 12 1 0 Unmodified _NEESVLLFTQIK_ 0 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.8871 2 710.887749 1419.76095 72638.18 0.83667 0.00059478 0.13018 9.2545E-05 0.96685 0.00068732 710.887879590223 715.396467869596 120.1 0.44536 120.1 119.89 120.34 0 81 19 6 0 0 0 3.973E-10 1 70311 125.23 125.23 1 1.1871 0.96786 0 6529800 3784600 2745200 25778 1681 9742 10008 40350 40350 NEETLREEEEEK 12 1 1 Unmodified _NEETLREEEEEK_ 0 0 1 P82663 P82663 P82663 MRPS25 28S ribosomal protein S25, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.8478 2 767.847007 1533.67946 70300.23 0.44763 0.00034371 0.11157 8.5666E-05 0.55919 0.00042937 767.847501442285 776.858331384284 19.087 0.29677 19.087 18.941 19.238 0 92 21 6 0 0 0 0.0002178 2 5831 99.283 99.283 1 1.1463 1.2432 0 15330000 6725000 8604800 25779 1667 9743 10009 40351;40352 40352 NEETLREEEEEK 12 1 1 Unmodified _NEETLREEEEEK_ 0 0 1 P82663 P82663 P82663 MRPS25 28S ribosomal protein S25, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.8467 2 767.847007 1533.67946 70199.9 0.50574 0.00038833 0.30574 0.00023476 0.81148 0.00062309 768.348703678979 776.858406653162 19.08 0.15375 19.08 19.01 19.164 0 38 7 7 0 0 0 6.5479E-05 1 5549 107.06 107.06 1 1.7308 1.9865 0 24446000 8790300 15655000 25780 1667 9743 10009 40353 40353 NEETLREEEEEK 12 1 1 Unmodified _NEETLREEEEEK_ 0 0 1 P82663 P82663 P82663 MRPS25 28S ribosomal protein S25, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.8585 2 767.847007 1533.67946 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.155 1 19.155 18.655 19.655 0 0 0 0 5.7614E-06 1 5621 96.229 60.286 1 25781 1667 9743 10009 40354 40354 NEETLREEEEEKK 13 2 1 Unmodified _NEETLREEEEEKK_ 0 0 2 P82663 P82663 P82663 MRPS25 28S ribosomal protein S25, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.9324 3 554.932084 1661.77442 81139.65 0.081091 4.5E-05 0.34722 0.00019269 0.42832 0.00023769 554.932359364422 563.610949100253 16.123 0.46736 16.123 15.928 16.395 0 124 31 8 0 0 0 0.021852 1 3428 35.204 35.204 1 1.4389 1.8558 0 4606500 1840000 2766400 25782 1667 9744 10010 40355 40355 NEEVQFGQHLDAAR 14 0 1 Unmodified _NEEVQFGQHLDAAR_ 0 0 0 A0A0A8K8C0;Q9H6W3 A0A0A8K8C0 A0A0A8K8C0 URLC2;NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.2636 3 538.593737 1612.75938 NaN NaN NaN -0.69945 -0.00037672 NaN NaN NaN NaN 48.583 0.34353 48.583 48.461 48.804 0 0 0 0 0.020709 1 26535 35.891 18.775 1 NaN NaN 0 3470800 0 3470800 25783 497 9745 10011 40356 40356 NEEVQFGQHLDAAR 14 0 1 Unmodified _NEEVQFGQHLDAAR_ 0 0 0 A0A0A8K8C0;Q9H6W3 A0A0A8K8C0 A0A0A8K8C0 URLC2;NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.9301 3 538.593737 1612.75938 89258.02 0.46262 0.00024916 -0.26767 -0.00014416 0.19495 0.000105 538.593607722157 541.929770407019 47.114 0.35081 47.114 46.989 47.34 0 69 27 4 0 0 0 0.01217 1 26152 28.432 22.4 1 0.55034 0.55326 0 11086000 7137700 3948500 25784 497 9745 10011 40357 40357 NEEVQFGQHLDAAR 14 0 1 Unmodified _NEEVQFGQHLDAAR_ 0 0 0 A0A0A8K8C0;Q9H6W3 A0A0A8K8C0 A0A0A8K8C0 URLC2;NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.3873 2 807.386968 1612.75938 NaN NaN NaN 0.78988 0.00063774 NaN NaN NaN NaN 47.101 0.1566 47.101 47.011 47.168 -3.8147E-06 0 0 0 0.0022679 1 26126 66.267 58.886 1 NaN NaN 0 4384600 4384600 0 25785 497 9745 10011 40358 40358 NEFISEYCGELISQDEADRR 20 0 2 Unmodified _NEFISEYCGELISQDEADRR_ 0 0 1 A0A0A0MSY9;Q92800 A0A0A0MSY9 A0A0A0MSY9 EZH1 Histone-lysine N-methyltransferase EZH1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.3668 3 811.032532 2430.07577 NaN NaN NaN 0.3634 0.00029473 NaN NaN NaN NaN 85.292 0.14586 85.292 85.267 85.413 0 0 0 0 0.041382 1 51304 23.293 0 1 NaN NaN 0 5366000 5366000 0 25786 483 9746 10012 40359 40359 NEFISEYCGELISQDEADRR 20 0 2 Unmodified _NEFISEYCGELISQDEADRR_ 0 0 1 A0A0A0MSY9;Q92800 A0A0A0MSY9 A0A0A0MSY9 EZH1 Histone-lysine N-methyltransferase EZH1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.033 3 811.032532 2430.07577 68296.89 0.56816 0.0004608 -0.11478 -9.3092E-05 0.45338 0.0003677 811.03245592703 818.03878392398 84.648 0.51044 84.648 84.413 84.923 0 204 42 7 0 0 0 4.9097E-05 1 51887 38.017 0 1 0.975 1.0628 0 18565000 11123000 7441200 25787 483 9746 10012 40360 40360 NEFISEYCGELISQDEADRR 20 0 2 Unmodified _NEFISEYCGELISQDEADRR_ 0 0 1 A0A0A0MSY9;Q92800 A0A0A0MSY9 A0A0A0MSY9 EZH1 Histone-lysine N-methyltransferase EZH1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.0327 3 811.032532 2430.07577 67824.62 0.64752 0.00052516 0.15833 0.00012841 0.80584 0.00065356 811.366992078343 817.70496989417 98.164 0.61004 98.164 97.877 98.487 0 157 38 6 0 0 0 5.1707E-05 1 55358 37.379 0 1 1.572 1.3478 0 5619900 1829400 3790500 25788 483 9746 10012 40361 40361 NEFISEYCGELISQDEADRR 20 0 2 Unmodified _NEFISEYCGELISQDEADRR_ 0 0 1 A0A0A0MSY9;Q92800 A0A0A0MSY9 A0A0A0MSY9 EZH1 Histone-lysine N-methyltransferase EZH1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.3672 3 811.032532 2430.07577 67476.87 0.67749 0.00054947 -0.068944 -5.5916E-05 0.60855 0.00049355 811.367281674004 817.704781465699 98.079 0.8203 98.079 97.563 98.384 0 216 50 9 0 0 0 0.0012545 1 54521 28.813 0 1 1.8359 1.6664 0 5848200 1830500 4017600 25789 483 9746 10012 40362 40362 NEGNIFPNPEATFVK 15 1 0 Unmodified _NEGNIFPNPEATFVK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 842.9232 2 838.917569 1675.82059 66820.42 0.77944 0.00065389 -0.65699 -0.00055116 0.12245 0.00010273 838.917377452198 842.923033948009 103.55 1.3979 103.55 103.04 104.43 0 802 114 11 0 0 0 7.165E-16 2 64055 136.27 120.18 1 0.614 0.71657 0 272210000 164560000 107650000 25790 2148 9747 10013 40363;40364 40363 NEGNIFPNPEATFVK 15 1 0 Unmodified _NEGNIFPNPEATFVK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.9178 2 838.917569 1675.82059 65707.75 0.86523 0.00072586 -0.60178 -0.00050484 0.26345 0.00022101 838.917346665136 842.922960146879 102.92 1.4656 102.92 102.22 103.68 0 708 117 10 0 0 0 1.8313E-30 1 65211 155.02 131.27 1 0.60422 0.70921 0 340910000 215640000 125270000 25791 2148 9747 10013 40365 40365 NEGNIFPNPEATFVK 15 1 0 Unmodified _NEGNIFPNPEATFVK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 843.426 2 838.917569 1675.82059 65627.14 0.96865 0.00081262 -0.95615 -0.00080213 0.0125 1.0486E-05 838.917380415544 842.922845272139 115.52 1.4667 115.52 115.12 116.58 0 375 65 11 0 0 0 0.00017547 3 67618 77.912 70.001 1 0.74033 0.64654 0 173360000 95709000 77655000 25792 2148 9747 10013 40366;40367;40368 40367 NEGNIFPNPEATFVK 15 1 0 Unmodified _NEGNIFPNPEATFVK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 842.9245 2 838.917569 1675.82059 65728.81 0.72396 0.00060734 -0.64621 -0.00054211 0.077752 6.5227E-05 838.917522691028 842.92316097319 115.39 1.8196 115.39 114.5 116.32 0 407 86 11 0 0 0 0.00022386 3 66557 69.716 64.4 1 0.70044 0.60196 0 154570000 89314000 65258000 25793 2148 9747 10013 40369;40370;40371 40370 NEGVIEFVSYSDMK 14 1 0 Oxidation (M) _NEGVIEFVSYSDM(ox)K_ NEGVIEFVSYSDM(1)K NEGVIEFVSYSDM(47.71)K 0 1 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5 A8K644 A8K644 SFRS4;SRSF4 Serine/arginine-rich splicing factor 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.8836 2 817.374346 1632.73414 69993.92 1.217 0.00099474 -0.0053356 -4.3612E-06 1.2117 0.00099038 817.375006346557 821.380898762236 91.073 0.44046 91.073 90.874 91.314 0 110 35 5 0 0 0 0.0015033 1 55099 47.712 47.712 1 1.6212 1.6386 0 10116000 3935300 6181000 25794 755 9748 10014 40372 40372 585 NEIASVAYR 9 0 1 Unmodified _NEIASVAYR_ 0 0 0 O15371;B4E1K8 O15371 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.7718 2 511.766906 1021.51926 NaN NaN NaN -0.48079 -0.00024605 NaN NaN NaN NaN 42.488 0.30793 42.488 42.352 42.66 0 0 0 0 0.003533 1 22589 78.264 57.317 1 NaN NaN 0 13086000 0 13086000 25795 1378 9749 10015 40373 40373 NEIDNYEEDYQK 12 1 0 Unmodified _NEIDNYEEDYQK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.3361 2 780.32845 1558.64235 71826.74 0.35891 0.00028007 0.21944 0.00017124 0.57836 0.00045131 780.83011415998 784.335823367643 45.777 0.48206 45.777 45.518 46 0 140 41 6 0 0 0 0.00023548 1 24581 85.958 81.492 1 1.69 1.6563 0 21085000 7066700 14018000 25796 415 9750 10016 40374 40374 NEIDNYEEDYQK 12 1 0 Unmodified _NEIDNYEEDYQK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.3371 2 780.32845 1558.64235 71156.09 0.79666 0.00062166 0.10607 8.2767E-05 0.90273 0.00070443 780.328277846516 784.3356163878 44.835 0.44808 44.835 44.624 45.072 -3.8147E-06 116 34 5 0 0 0 4.9915E-06 2 24438 110.39 107.63 1 1.4891 1.4889 0 15352000 7605100 7746700 25797 415 9750 10016 40375;40376 40375 NEIDNYEEDYQK 12 1 0 Unmodified _NEIDNYEEDYQK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.3362 2 780.32845 1558.64235 71283.52 0.69733 0.00054414 -0.56614 -0.00044177 0.13119 0.00010237 780.32816207992 784.335563906928 53.9 0.50434 53.9 53.663 54.167 0 170 40 7 0 0 0 0.020709 1 26743 39.179 39.179 1 5.0803 3.9581 0 3327200 609480 2717800 25798 415 9750 10016 40377 40377 NEIDNYEEDYQK 12 1 0 Unmodified _NEIDNYEEDYQK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.8307 2 780.32845 1558.64235 70812.34 0.46569 0.00036339 -0.078507 -6.1261E-05 0.38718 0.00030213 780.328430634181 784.335751158521 54.69 0.56756 54.69 54.383 54.95 0 173 43 6 0 0 0 0.037481 1 26687 34.692 34.692 1 4.2921 3.4811 0 2800200 510040 2290100 25799 415 9750 10016 40378 40378 NEINIDTLAR 10 0 1 Unmodified _NEINIDTLAR_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.8138 2 579.809302 1157.60405 81442.02 0.46816 0.00027144 0.59929 0.00034747 1.0674 0.00061892 579.809490102483 584.813695035676 85.921 0.49957 85.921 85.704 86.204 0 98 28 5 0 0 0 0.03712 1 47016 39.937 19.067 1 0.74605 0.64612 0 1963700 1185300 778410 25800 1913 9751 10017 40379 40379 NELAETLALLK 11 1 0 Unmodified _NELAETLALLK_ 0 0 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.8607 2 607.853178 1213.6918 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.88 1 114.88 114.38 115.38 0 0 0 0 0.0007579 1 73004 71.451 50.549 1 25801 1991 9752 10018 40380 40380 NELAETLALLK 11 1 0 Unmodified _NELAETLALLK_ 0 0 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.8598 2 607.853178 1213.6918 NaN NaN NaN -0.39565 -0.0002405 NaN NaN NaN NaN 114.21 0.42574 114.21 114 114.42 0 0 0 0 0.044136 1 74359 46.001 38.352 1 NaN NaN 0 2874300 0 2874300 25802 1991 9752 10018 40381 40381 NELAETLALLK 11 1 0 Unmodified _NELAETLALLK_ 0 0 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.8548 2 607.853178 1213.6918 80941.2 0.59046 0.00035891 0.009037 5.4931E-06 0.5995 0.00036441 607.853158911542 611.860258208975 126.87 0.41537 126.87 126.72 127.14 -7.6294E-06 46 17 4 0 0 0 0.046186 1 76381 35.224 35.224 1 0.74255 0.63785 0 1118300 704520 413750 25803 1991 9752 10018 40382 40382 NELAETLALLK 11 1 0 Unmodified _NELAETLALLK_ 0 0 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.8544 2 607.853178 1213.6918 82604.54 0.51242 0.00031148 0.20497 0.00012459 0.71739 0.00043607 607.85327921991 611.86059661772 126.71 0.44499 126.71 126.44 126.89 7.6294E-06 38 19 4 0 0 0 0.023921 1 75360 42.001 42.001 1 0.93297 0.77622 0 1557400 742510 814870 25804 1991 9752 10018 40383 40383 NELEIPGQYDGR 12 0 1 Unmodified _NELEIPGQYDGR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.8331 2 695.833505 1389.65246 73249.23 0.42679 0.00029697 0.18298 0.00012732 0.60976 0.00042429 695.8334956202 700.837761639614 69.609 0.6702 69.609 69.338 70.009 0 268 57 7 0 0 0 1.5784E-12 2 40376 127.51 107.37 1 0.65682 0.73852 0 95119000 52808000 42311000 25805 1665 9753 10019 40384;40385 40385 NELEIPGQYDGR 12 0 1 Unmodified _NELEIPGQYDGR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.8329 2 695.833505 1389.65246 73264.04 0.80546 0.00056047 -0.0556 -3.8689E-05 0.74986 0.00052178 695.833305395125 700.837415781739 68.401 0.9025 68.401 68.153 69.055 0 308 74 7 0 0 0 6.1296E-13 2 40576 133.89 100.84 1 0.65296 0.74362 0 107450000 64030000 43424000 25806 1665 9753 10019 40386;40387 40387 NELEIPGQYDGR 12 0 1 Unmodified _NELEIPGQYDGR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 700.8383 2 695.833505 1389.65246 73404.75 0.36463 0.00025372 0.42533 0.00029596 0.78996 0.00054968 695.833660235164 700.837973740331 79.791 0.91072 79.791 79.389 80.3 7.6294E-06 300 56 9 0 0 0 0.00023787 2 43042 73.951 62.787 1 0.38204 0.31453 0 18078000 12941000 5137300 25807 1665 9753 10019 40388;40389 40389 NELEIPGQYDGR 12 0 1 Unmodified _NELEIPGQYDGR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 695.8337 2 695.833505 1389.65246 72474.5 0.41606 0.00028951 0.24331 0.0001693 0.65937 0.00045881 695.833551597283 700.837820921403 80.059 0.89926 80.059 79.711 80.61 0 252 54 7 0 0 0 0.0002022 1 42262 79.201 68.372 1 0.39707 0.33175 0 16211000 11153000 5057500 25808 1665 9753 10019 40390 40390 NELESYAYSLK 11 1 0 Unmodified _NELESYAYSLK_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.8292 2 658.822075 1315.6296 80345.92 0.53409 0.00035187 0.25746 0.00016962 0.79154 0.00052149 658.822098559814 662.829052203522 90.966 0.49934 90.966 90.705 91.204 0 128 28 7 0 0 0 0.0086314 1 49634 50.452 43.849 1 0.79631 0.6428 0 4314500 2619000 1695500 25809 1466 9754 10020 40391 40391 NELMYQLEQDHDLQAILQER 20 0 1 Oxidation (M) _NELM(ox)YQLEQDHDLQAILQER_ NELM(1)YQLEQDHDLQAILQER NELM(161.22)YQLEQDHDLQAILQER 0 1 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.4066 3 834.735827 2501.18565 66766.01 0.83201 0.00069451 -0.3793 -0.00031662 0.45271 0.00037789 835.069880689117 838.071714942127 107.4 0.55128 107.4 107.09 107.64 0 296 41 9 0 0 0 1.141E-41 2 66888 161.22 157.27 1 1.4866 1.6532 0 75457000 29484000 45973000 25810 1691 9755 10021 40392;40393 40393 1518 NELMYQLEQDHDLQAILQER 20 0 1 Oxidation (M) _NELM(ox)YQLEQDHDLQAILQER_ NELM(1)YQLEQDHDLQAILQER NELM(91.72)YQLEQDHDLQAILQER 0 1 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.4045 3 834.735827 2501.18565 66076.32 0.79126 0.0006605 -0.26948 -0.00022495 0.52178 0.00043555 835.070166696982 838.406059944639 107.71 0.83307 107.71 107.47 108.31 0 398 61 11 0 0 0 1.6366E-09 1 67352 91.725 91.725 1 1.5485 1.7292 0 86019000 34458000 51561000 25811 1691 9755 10021 40394 40394 1518 NELMYQLEQDHDLQAILQER 20 0 1 Oxidation (M) _NELM(ox)YQLEQDHDLQAILQER_ NELM(1)YQLEQDHDLQAILQER NELM(115.76)YQLEQDHDLQAILQER 0 1 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.0709 3 834.735827 2501.18565 66759.16 0.95622 0.00079819 -0.6205 -0.00051795 0.33573 0.00028024 835.069834662642 838.071509735646 106.76 0.54633 106.76 106.38 106.93 0 346 42 11 0 0 0 4.7488E-18 2 67905 115.76 111.96 1 1.4137 1.6109 0 102810000 39506000 63306000 25812 1691 9755 10021 40395;40396 40395 1518 NELMYQLEQDHDLQAILQER 20 0 1 Oxidation (M) _NELM(ox)YQLEQDHDLQAILQER_ NELM(1)YQLEQDHDLQAILQER NELM(69.12)YQLEQDHDLQAILQER 0 1 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 835.0714 3 834.735827 2501.18565 65935.3 0.70155 0.00058561 0.02886 2.409E-05 0.73041 0.0006097 835.070388296982 838.406061543026 118.43 0.74274 118.43 117.92 118.67 7.6294E-06 145 30 12 0 0 0 5.4588E-07 1 69924 69.122 69.122 1 1.22 1.0088 0 19495000 9818500 9676600 25813 1691 9755 10021 40397 40397 1518 NELMYQLEQDHDLQAILQER 20 0 1 Oxidation (M) _NELM(ox)YQLEQDHDLQAILQER_ NELM(1)YQLEQDHDLQAILQER NELM(72.57)YQLEQDHDLQAILQER 0 1 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 835.0708 3 834.735827 2501.18565 66375.16 0.70515 0.00058861 -0.08248 -6.8849E-05 0.62267 0.00051976 835.06990888619 838.071985138226 118.21 0.63586 118.21 117.76 118.4 7.6294E-06 138 28 11 0 0 0 4.2688E-07 1 68872 72.568 72.568 1 1.1964 0.99532 0 15575000 6776500 8798500 25814 1691 9755 10021 40398 40398 1518 NELMYQLEQDHDLQAILQER 20 0 1 Unmodified _NELMYQLEQDHDLQAILQER_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.0724 3 829.404189 2485.19074 NaN NaN NaN -0.91409 -0.00075815 NaN NaN NaN NaN 114.51 0.3486 114.51 114.38 114.73 0 0 0 0 0.00037939 2 74502 45.094 37.382 1 NaN NaN 0 3987600 0 3987600 25815 1691 9755 10022 40399;40400 40400 NELMYQLEQDHDLQAILQER 20 0 1 Unmodified _NELMYQLEQDHDLQAILQER_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.076 3 829.404189 2485.19074 66601.47 0.9212 0.00076405 -0.011602 -9.6228E-06 0.9096 0.00075442 829.738509038535 833.074744412241 126.53 0.6223 126.53 126.24 126.86 0 124 21 9 0 0 0 1.1748E-14 2 76163 112.32 112.32 1 1.6577 1.3626 0 17594000 6522500 11071000 25816 1691 9755 10022 40401;40402 40402 NELMYQLEQDHDLQAILQER 20 0 1 Unmodified _NELMYQLEQDHDLQAILQER_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.7383 3 829.404189 2485.19074 66386.13 0.74531 0.00061816 -0.25385 -0.00021054 0.49147 0.00040762 830.072622838532 833.074544438593 126.39 0.49509 126.39 126.14 126.64 7.6294E-06 147 20 11 0 0 0 2.3997E-65 1 75081 179.95 179.95 1 1.6449 1.4008 0 19582000 7117500 12465000 25817 1691 9755 10022 40403 40403 NELQQTINK 9 1 0 Unmodified _NELQQTINK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.2911 2 544.290745 1086.56694 81799.44 0.89676 0.0004881 -0.031178 -1.697E-05 0.86558 0.00047113 544.29074872998 548.298049593087 28.211 0.32064 28.211 28.07 28.39 -1.9073E-06 65 22 5 0 0 0 1.6659E-05 1 13227 121.09 121.09 1 0.8723 0.92558 0 15767000 8521800 7245000 25818 696 9756 10023 40404 40404 NELQQTINK 9 1 0 Unmodified _NELQQTINK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.2978 2 544.290745 1086.56694 81232.37 0.19809 0.00010782 0.012488 6.7971E-06 0.21058 0.00011462 544.290973210743 548.297774965479 27.647 0.49684 27.647 27.483 27.98 1.9073E-06 60 27 5 0 0 0 1.656E-06 2 12881 136.27 126.62 1 0.72848 0.75111 0 32645000 17398000 15246000 25819 696 9756 10023 40405;40406 40405 NELQQTINK 9 1 0 Unmodified _NELQQTINK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.2899 2 544.290745 1086.56694 NaN NaN NaN -0.19772 -0.00010762 NaN NaN NaN NaN 31.972 0.3611 31.972 31.784 32.145 1.9073E-06 0 0 0 0.020834 1 13605 58.23 5.4442 1 NaN NaN 0 1685900 1685900 0 25820 696 9756 10023 40407 40407 NELQQTINK 9 1 0 Unmodified _NELQQTINK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.2977 2 544.290745 1086.56694 82468.48 0.52654 0.00028659 -0.56274 -0.00030629 -0.036193 -1.9699E-05 544.290370784089 548.297521942788 32.074 0.44934 32.074 31.859 32.308 0 90 23 6 0 0 0 0.0011206 2 13259 89.698 75.541 1 0.99521 0.79694 0 3054900 1626300 1428700 25821 696 9756 10023 40408;40409 40409 NENEEILERPAQLANAR 17 0 2 Unmodified _NENEEILERPAQLANAR_ 0 0 1 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.0084 3 656.336215 1965.98682 73803.45 0.58204 0.00038201 0.17569 0.00011531 0.75773 0.00049733 656.670564505115 663.00850584609 68.378 0.91042 68.378 68.005 68.915 -7.6294E-06 447 80 8 0 0 0 2.3441E-10 2 39459 87.287 87.287 1 2.2148 2.4105 0 66317000 20927000 45390000 25822 1010 9757 10024 40410;40411 40410 NENEEILERPAQLANAR 17 0 2 Unmodified _NENEEILERPAQLANAR_ 0 0 1 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.671 3 656.336215 1965.98682 73875.4 0.49251 0.00032326 0.10402 6.8269E-05 0.59653 0.00039152 656.336300988206 663.008498007914 67.072 0.76611 67.072 66.672 67.438 0 369 64 8 0 0 0 8.7468E-26 2 39625 122.1 118.22 1 2.3826 2.7835 0 106300000 33510000 72791000 25823 1010 9757 10024 40412;40413 40412 NENEEILERPAQLANAR 17 0 2 Unmodified _NENEEILERPAQLANAR_ 0 0 1 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.3435 3 656.336215 1965.98682 NaN NaN NaN -0.0024929 -1.6362E-06 NaN NaN NaN NaN 78.444 0.68898 78.444 78.129 78.818 -7.6294E-06 0 0 0 9.0904E-07 1 42054 84.874 67.173 1 NaN NaN 0 23896000 0 23896000 25824 1010 9757 10024 40414 40414 NENEEILERPAQLANAR 17 0 2 Unmodified _NENEEILERPAQLANAR_ 0 0 1 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.3428 3 656.336215 1965.98682 NaN NaN NaN -0.019052 -1.2505E-05 NaN NaN NaN NaN 78.587 0.63824 78.587 78.345 78.983 0 0 0 0 0.047004 1 41483 32.55 28.656 1 NaN NaN 0 21860000 0 21860000 25825 1010 9757 10024 40415 40415 NENLAANFLLQQNFDED 17 0 0 Unmodified _NENLAANFLLQQNFDED_ 0 0 0 P54727;Q53F10;B7Z4W4 P54727 P54727 RAD23B UV excision repair protein RAD23 homolog B ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 997.9571 2 997.958151 1993.90175 NaN NaN NaN -0.45208 -0.00045116 NaN NaN NaN NaN 126.86 0.55838 126.86 126.62 127.18 0 0 0 0 0.021938 1 84530 39.424 30.911 1 25826 1610 9758 10025 40416 40416 NENTEGSPQEDGVELEGLK 19 1 0 Unmodified _NENTEGSPQEDGVELEGLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1023.4713 2 1022.96891 2043.92327 60025.33 0.12015 0.00012291 0.38253 0.00039132 0.50268 0.00051423 1022.96925079076 1026.97627632898 72.3 0.89396 72.3 71.953 72.847 0 517 65 11 0 0 0 1.0887E-12 1 42103 111.12 111.12 1 0.61814 0.70635 0 182050000 112480000 69561000 25827 1471 9759 10026 40417 40417 NENTEGSPQEDGVELEGLK 19 1 0 Unmodified _NENTEGSPQEDGVELEGLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1026.9752 2 1022.96891 2043.92327 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.995 1 71.995 71.495 72.495 0 0 0 0 0.00021604 1 42075 61.409 48.429 1 25828 1471 9759 10026 40418 40418 NENTEGSPQEDGVELEGLK 19 1 0 Unmodified _NENTEGSPQEDGVELEGLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1022.9694 2 1022.96891 2043.92327 60045.46 0.068051 6.9614E-05 0.34659 0.00035455 0.41464 0.00042416 1023.47075934188 1026.97626717549 71.243 0.78784 71.243 70.895 71.683 0 471 57 11 0 0 0 9.7768E-93 3 42514 204.35 204.35 1 0.58085 0.67466 0 228160000 147460000 80691000 25829 1471 9759 10026 40419;40420;40421 40420 NENTEGSPQEDGVELEGLK 19 1 0 Unmodified _NENTEGSPQEDGVELEGLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1026.9758 2 1022.96891 2043.92327 60105.8 0.25126 0.00025703 0.1615 0.00016521 0.41276 0.00042224 1022.96913713838 1026.97615717134 83.137 0.73379 83.137 82.757 83.491 0 394 42 12 0 0 0 7.1534E-09 1 45138 98.654 98.654 1 0.80732 0.69186 0 76225000 41408000 34817000 25830 1471 9759 10026 40422 40422 NENTEGSPQEDGVELEGLK 19 1 0 Unmodified _NENTEGSPQEDGVELEGLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1026.9769 2 1022.96891 2043.92327 59605.8 0.36954 0.00037802 -0.22193 -0.00022702 0.14761 0.000151 1022.96871928706 1027.47720242766 83.332 0.80115 83.332 83 83.801 7.6294E-06 338 45 11 0 0 0 1.0961E-22 1 44483 132.31 132.31 1 0.79404 0.67317 0 64701000 34964000 29736000 25831 1471 9759 10026 40423 40423 NEPTSEPTEPSQAGEDLEK 19 1 0 Unmodified _NEPTSEPTEPSQAGEDLEK_ 0 0 0 B5MBX1;A8K356;A8K9C0;A0A0C4DFT8;B4DFY8;G3XAA4;B3KPL2;Q9NQC1 B5MBX1 B5MBX1 JADE2;PHF15 Protein Jade-2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1029.4603 2 1029.46092 2056.90729 NaN NaN NaN -0.48016 -0.0004943 NaN NaN NaN NaN 45.207 0.25397 45.207 45.042 45.296 3.8147E-06 0 0 0 0.015592 1 24704 38.189 25.209 1 NaN NaN 0 4681400 4681400 0 25832 507 9760 10027 40424 40424 NEQAFEEVFQNANFR 15 0 1 Unmodified _NEQAFEEVFQNANFR_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.4254 2 921.923914 1841.83328 64410.86 0.74216 0.00068421 -0.22226 -0.00020491 0.5199 0.00047931 922.42528697666 926.927790024146 106.93 0.59116 106.93 106.73 107.32 0 196 44 6 0 0 0 2.1021E-15 1 66535 133.05 133.05 1 0.72425 0.73253 0 17884000 11251000 6632600 25833 1525 9761 10028 40425 40425 NEQAFEEVFQNANFR 15 0 1 Unmodified _NEQAFEEVFQNANFR_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.9239 2 921.923914 1841.83328 64308.61 0.86333 0.00079592 -0.040544 -3.7379E-05 0.82278 0.00075854 922.425329966427 926.927951397322 106.36 0.58282 106.36 106.16 106.74 0 189 44 6 0 0 0 0.00022178 1 67616 66.498 66.498 1 0.62764 0.63267 0 19546000 12344000 7202100 25834 1525 9761 10028 40426 40426 NEQAFEEVFQNANFR 15 0 1 Unmodified _NEQAFEEVFQNANFR_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 921.9239 2 921.923914 1841.83328 63679.27 0.75157 0.00069289 -0.33535 -0.00030917 0.41622 0.00038372 921.92358884621 926.928370026817 118.41 0.52303 118.41 118.16 118.68 -7.6294E-06 86 21 7 0 0 0 0.00085206 1 69878 49.423 49.423 1 0.26446 0.22352 0 4870200 4010200 860020 25835 1525 9761 10028 40427 40427 NEQAFEEVFQNANFR 15 0 1 Unmodified _NEQAFEEVFQNANFR_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 922.426 2 921.923914 1841.83328 65672.23 0.49605 0.00045732 -0.21945 -0.00020232 0.2766 0.000255 922.425408091236 926.92816080708 118.24 0.44371 118.24 118.02 118.46 0 86 19 7 0 0 0 0.01339 1 68821 33.782 33.782 1 0.3319 0.28533 0 4434100 3409800 1024300 25836 1525 9761 10028 40428 40428 NEQDAYAINSYTR 13 0 1 Unmodified _NEQDAYAINSYTR_ 0 0 0 A0A140VJX1;P24752 A0A140VJX1 A0A140VJX1 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.8566 2 772.852426 1543.6903 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.559 1 51.559 51.059 52.059 0 0 0 0 0.0041619 1 29261 61.435 43.167 1 25837 611 9762 10029 40429 40429 NEQFPVLDHLLSIIK 15 1 0 Unmodified _NEQFPVLDHLLSIIK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.0042 3 589.333083 1764.97742 79950.83 0.25439 0.00014992 0.6029 0.00035531 0.85729 0.00050523 589.333111721923 592.339463860863 133.39 0.14124 133.39 133.3 133.44 0 13 3 5 0 0 0 2.9777E-05 1 89618 82.651 76.488 1 1.3212 1.326 0 15906000 7587300 8318900 25838 1412 9763 10030 40430 40430 NESAVIVAPTSSGK 14 1 0 Unmodified _NESAVIVAPTSSGK_ 0 0 0 Q8IY21 Q8IY21 Q8IY21 DDX60 Probable ATP-dependent RNA helicase DDX60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.3585 2 680.359356 1358.70416 75525.29 0.6559 0.00044625 -0.17172 -0.00011683 0.48418 0.00032941 680.359749741643 684.365891193549 53.996 0.56106 53.996 53.674 54.235 0 136 45 4 0 0 0 0.00019192 2 26848 70.488 70.488 1 0.72281 0.60507 0 2206900 1180700 1026200 25839 1896 9764 10031 40431;40432 40432 NESAVIVAPTSSGK 14 1 0 Unmodified _NESAVIVAPTSSGK_ 0 0 0 Q8IY21 Q8IY21 Q8IY21 DDX60 Probable ATP-dependent RNA helicase DDX60 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.3655 2 680.359356 1358.70416 NaN NaN NaN 0.092305 6.2801E-05 NaN NaN NaN NaN 54.391 0.47591 54.391 54.151 54.627 -3.8147E-06 0 0 0 0.03283 1 26576 41.242 33.595 1 NaN NaN 0 972430 0 972430 25840 1896 9764 10031 40433 40433 NESAVIVAPTSSGK 14 1 0 Unmodified _NESAVIVAPTSSGK_ 0 0 0 Q8IY21 Q8IY21 Q8IY21 DDX60 Probable ATP-dependent RNA helicase DDX60 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.36 2 680.359356 1358.70416 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.421 1 54.421 53.921 54.921 0 0 0 0 0.0028903 1 26548 58.674 38.37 1 25841 1896 9764 10031 40434 40434 NESELEAHLCR 11 0 1 Unmodified _NESELEAHLCR_ 0 0 0 Q14008;Q8IYN5;H0YDX5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3196 2 679.311883 1356.60921 NaN NaN NaN 2.0586 0.0013984 NaN NaN NaN NaN 35.764 0.15959 35.764 35.655 35.814 0 0 0 0 6.788E-05 1 18282 96.89 42.282 1 NaN NaN 0 3155000 0 3155000 25842 1725 9765 10032 40435 40435 NESGTWIQYGEEK 13 1 0 Unmodified _NESGTWIQYGEEK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4;Q05DV5;H7C5K1 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.857 2 770.849352 1539.68415 NaN NaN NaN 0.019011 1.4655E-05 NaN NaN NaN NaN 62.912 0.40837 62.912 62.698 63.107 0 0 0 0 0.00013735 1 36080 90.653 50.652 1 NaN NaN 0 6448900 0 6448900 25843 1873 9766 10033 40436 40436 NESGTWIQYGEEK 13 1 0 Unmodified _NESGTWIQYGEEK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4;Q05DV5;H7C5K1 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.8564 2 770.849352 1539.68415 NaN NaN NaN 0.34587 0.00026661 NaN NaN NaN NaN 61.837 0.61491 61.837 61.517 62.132 -3.8147E-06 0 0 0 0.015115 1 36200 50.484 32.971 1 NaN NaN 0 6513500 0 6513500 25844 1873 9766 10033 40437 40437 NESGTWIQYGEEK 13 1 0 Unmodified _NESGTWIQYGEEK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4;Q05DV5;H7C5K1 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.8497 2 770.849352 1539.68415 70613.26 0.66575 0.00051319 0.3603 0.00027774 1.0261 0.00079093 770.849537489898 774.856574194352 72.908 0.72794 72.908 72.585 73.313 0 160 48 6 0 0 0 0.032717 1 38575 32.999 22.768 1 0.98682 0.8308 0 2132800 999670 1133200 25845 1873 9766 10033 40438 40438 NESLTEHPR 9 0 1 Unmodified _NESLTEHPR_ 0 0 0 B2RA91;F8VXG7;Q99590;Q05BS8;A0A0A0MTP7;B4DZM2 B2RA91 B2RA91 SCAF11;SFRS2IP Protein SCAF11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.7693 2 541.764894 1081.51524 NaN NaN NaN 0.21949 0.00011891 NaN NaN NaN NaN 16.911 0.16549 16.911 16.826 16.991 0 0 0 0 0.017414 1 4201 60.91 35.016 1 NaN NaN 0 2600800 0 2600800 25846 871 9767 10034 40439 40439 NESLTEHPR 9 0 1 Unmodified _NESLTEHPR_ 0 0 0 B2RA91;F8VXG7;Q99590;Q05BS8;A0A0A0MTP7;B4DZM2 B2RA91 B2RA91 SCAF11;SFRS2IP Protein SCAF11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.7652 2 541.764894 1081.51524 NaN NaN NaN NaN NaN NaN NaN NaN NaN 16.986 1 16.986 16.486 17.486 0 0 0 0 0.044691 1 4203 48.283 31.507 1 25847 871 9767 10034 40440 40440 NESTPPSEELELDK 14 1 0 Unmodified _NESTPPSEELELDK_ 0 0 0 Q7L0Y3;C9JVB6 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.3799 2 794.372857 1586.73116 68013.58 0.68412 0.00054345 0.11964 9.504E-05 0.80377 0.00063849 794.37267692606 798.379945652787 59.232 0.37102 59.232 59.079 59.45 0 112 28 5 0 0 0 0.00086228 2 33681 57.802 50.673 1 2.4154 2.4134 0 18849000 4396100 14453000 25848 1871 9768 10035 40441;40442 40441 NESTPPSEELELDK 14 1 0 Unmodified _NESTPPSEELELDK_ 0 0 0 Q7L0Y3;C9JVB6 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.3807 2 794.372857 1586.73116 67841.45 0.86141 0.00068428 -0.20958 -0.00016649 0.65183 0.0005178 794.373080913134 798.379864129288 58.204 0.26134 58.204 58.068 58.329 0 73 18 6 0 0 0 0.00012212 1 33797 81.494 81.494 1 2.7948 2.8272 0 28922000 8772000 20150000 25849 1871 9768 10035 40443 40443 NETGLLSSIK 10 1 0 Unmodified _NETGLLSSIK_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.3029 2 531.295496 1060.57644 83841.83 0.4418 0.00023473 0.89324 0.00047458 1.335 0.0007093 531.295961453109 535.30264917574 70.274 0.70618 70.274 69.918 70.624 0 233 63 5 0 0 0 0.00037039 3 40769 88.495 38.455 1 1.0286 1.0205 0 19175000 10074000 9100700 25850 187 9769 10036 40444;40445;40446 40444 NETGLLSSIK 10 1 0 Unmodified _NETGLLSSIK_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.3032 2 531.295496 1060.57644 NaN NaN NaN 1.1584 0.00061546 NaN NaN NaN NaN 68.954 0.74786 68.954 68.603 69.351 0 0 0 0 0.0025671 1 40981 79.974 31.691 1 NaN NaN 0 9983700 0 9983700 25851 187 9769 10036 40447 40447 NETGLLSSIK 10 1 0 Unmodified _NETGLLSSIK_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 531.296 2 531.295496 1060.57644 85329.88 0.29536 0.00015692 0.80336 0.00042682 1.0987 0.00058375 531.29600954254 535.302808119135 80.546 0.75793 80.546 80.229 80.987 0 179 53 5 0 0 0 0.043564 1 43494 37.344 11.785 1 1.635 1.2926 0 5139100 2143400 2995700 25852 187 9769 10036 40448 40448 NETGLLSSIK 10 1 0 Unmodified _NETGLLSSIK_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.3035 2 531.295496 1060.57644 84124.55 0.50564 0.00026865 -0.0424 -2.2527E-05 0.46324 0.00024612 531.296080436384 535.302672954781 80.73 0.78045 80.73 80.37 81.151 0 216 55 6 0 0 0 0.017809 1 42697 47.706 17.019 1 1.8628 1.5029 0 4304300 1271800 3032500 25853 187 9769 10036 40449 40449 NEVLMVNIGSLSTGGR 16 0 1 Oxidation (M) _NEVLM(ox)VNIGSLSTGGR_ NEVLM(1)VNIGSLSTGGR NEVLM(90.41)VNIGSLSTGGR 0 1 0 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.9327 2 831.927611 1661.84067 NaN NaN NaN 0.010453 8.6958E-06 NaN NaN NaN NaN 99.113 0.41794 99.113 98.825 99.243 0 0 0 0 2.6729E-07 2 62041 90.412 79.543 1 NaN NaN 0 9345100 0 9345100 25854 1559 9770 10037 40450;40451 40450 1310 NEVSLVAEGFLPEDGSGR 18 0 1 Unmodified _NEVSLVAEGFLPEDGSGR_ 0 0 0 Q8N516;Q4LE38;O95163 Q8N516 Q8N516 IKBKAP;IKBKAP variant protein Elongator complex protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 938.4548 2 938.457787 1874.90102 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.4 1 109.4 108.9 109.9 0 0 0 0 0.0053657 1 68503 49.31 35.052 1 25855 1419 9771 10038 40452 40452 NEVSLVAEGFLPEDGSGR 18 0 1 Unmodified _NEVSLVAEGFLPEDGSGR_ 0 0 0 Q8N516;Q4LE38;O95163 Q8N516 Q8N516 IKBKAP;IKBKAP variant protein Elongator complex protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 938.9566 2 938.457787 1874.90102 66980.72 0.84068 0.00078895 -0.18964 -0.00017797 0.65104 0.00061097 938.958699520922 943.461820411939 108.97 0.36766 108.97 108.76 109.13 7.6294E-06 62 28 4 0 0 0 0.00085305 1 69868 40.025 40.025 1 1.0731 1.0533 0 13782000 4178000 9604200 25856 1419 9771 10038 40453 40453 NEVVGLIFR 9 0 1 Unmodified _NEVVGLIFR_ 0 0 0 Q8NBU5 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.8055 2 523.803291 1045.59203 82391.14 0.47114 0.00024678 0.2436 0.0001276 0.71474 0.00037438 523.803431560776 528.807490423018 100.37 0.84618 100.37 100.06 100.91 7.6294E-06 207 69 4 0 0 0 0.0022292 2 62932 75.109 60.334 1 1.4434 1.4467 0 17259000 6207400 11052000 25857 1920 9772 10039 40454;40455 40454 NEYSLTGLCNR 11 0 1 Unmodified _NEYSLTGLCNR_ 0 0 0 Q9BXY0;H0YBV6;A0PJ56 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8103 2 663.808976 1325.6034 73991.35 0.50095 0.00033254 0.79958 0.00053077 1.3005 0.0008633 663.809538197412 668.813828158032 62.785 0.84763 62.785 62.309 63.157 0 286 80 5 0 0 0 1.2744E-16 2 35989 152.06 143.1 1 0.77952 0.81456 0 38800000 21983000 16817000 25858 2016 9773 10040 40456;40457 40457 NEYSLTGLCNR 11 0 1 Unmodified _NEYSLTGLCNR_ 0 0 0 Q9BXY0;H0YBV6;A0PJ56 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.8093 2 663.808976 1325.6034 73871.71 0.51051 0.00033888 0.39445 0.00026184 0.90497 0.00060072 663.809277914772 668.813547172531 72.43 0.80324 72.43 72.147 72.951 0 317 59 8 0 0 0 0.0074524 2 38126 52.579 48.424 1 1.1035 0.90554 0 17077000 8009400 9067200 25859 2016 9773 10040 40458;40459 40459 NEYSLTGLCNR 11 0 1 Unmodified _NEYSLTGLCNR_ 0 0 0 Q9BXY0;H0YBV6;A0PJ56 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.8142 2 663.808976 1325.6034 73595.16 0.45831 0.00030423 0.40425 0.00026835 0.86257 0.00057258 663.80926244455 668.81346331154 72.901 0.9355 72.901 72.634 73.569 0 374 71 8 0 0 0 0.0019892 2 37640 63.283 59.266 1 1.1508 0.93256 0 11865000 5719100 6145400 25860 2016 9773 10040 40460;40461 40461 NFAADHFNQEILPVFLNANR 20 0 1 Unmodified _NFAADHFNQEILPVFLNANR_ 0 0 0 A8K4A8;A0A024R8Z9;Q6PI48;Q9H9J7;Q9NVT8 A8K4A8 A8K4A8 DARS2 Aspartate--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.4015 3 777.394064 2329.16036 70730.85 0.72761 0.00056564 3.0146 0.0023435 3.7422 0.0029092 777.399640685414 781.064588830026 117.13 0.52882 117.13 116.91 117.44 0 112 31 6 0 0 0 0.011558 1 76760 21.685 17.135 1 1.038 1.0224 0 14573000 6110800 8461800 25861 266 9774 10041 40462 40462 NFAFLEFR 8 0 1 Unmodified _NFAFLEFR_ 0 0 0 K7ENG2;B5BU25;P26368 K7ENG2 K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2692 2 522.269084 1042.52362 87536.93 0.74531 0.00038925 -0.17596 -9.1897E-05 0.56936 0.00029736 522.268922929085 527.273194068707 111.96 0.43978 111.96 111.74 112.18 0 106 31 4 0 0 0 0.024949 1 70490 55.531 47.261 1 1.1138 1.1343 0 7033500 3172700 3860800 25862 1074 9775 10042 40463 40463 NFAFLEFR 8 0 1 Unmodified _NFAFLEFR_ 0 0 0 K7ENG2;B5BU25;P26368 K7ENG2 K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.2689 2 522.269084 1042.52362 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.19 1 111.19 110.69 111.69 7.6294E-06 0 0 0 0.047267 1 71705 55.531 40.755 1 25863 1074 9775 10042 40464 40464 NFAIGYYLK 9 1 0 Unmodified _NFAIGYYLK_ 0 0 0 A8K132;O94925;Q53S89;Q68D38;B3KM58 A8K132;Q68D38 A8K132 GLS;DKFZp686O15119 Glutaminase kidney isoform, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.8 2 544.792392 1087.57023 82989.51 0.84386 0.00045973 0.25401 0.00013838 1.0979 0.00059811 544.793035304654 548.799327519403 97.074 0.50323 97.074 96.92 97.424 0 68 39 4 0 0 0 0.0022292 2 60604 75.109 46.935 1 3.117 3.1144 0 5641100 1598700 4042400 25864 701;902 9776 10043 40465;40466 40465 NFCGPSVTVDASAATK 16 1 0 Unmodified _NFCGPSVTVDASAATK_ 0 0 0 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.894 2 812.885412 1623.75627 NaN NaN NaN 1.8827 0.0015304 NaN NaN NaN NaN 67.56 0.29967 67.56 67.449 67.749 0 0 0 0 0.0011864 1 40067 64.55 46.686 1 NaN NaN 0 4557000 0 4557000 25865 1984 9777 10044 40467 40467 NFCGPSVTVDASAATK 16 1 0 Unmodified _NFCGPSVTVDASAATK_ 0 0 0 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 817.3943 2 812.885412 1623.75627 67508.7 0.61815 0.00050248 -0.49662 -0.0004037 0.12153 9.8789E-05 812.885596900032 816.892226182613 78.722 0.57733 78.722 78.463 79.041 7.6294E-06 110 34 5 0 0 0 0.00061799 2 42286 48.704 42.464 1 4.9194 3.9262 0 2926100 463910 2462200 25866 1984 9777 10044 40468;40469 40468 NFDEILR 7 0 1 Unmodified _NFDEILR_ 0 0 0 V9HWC7;P30041;A4UCS6 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.7423 2 453.737617 905.460681 93985.74 0.0090635 4.1124E-06 0.27983 0.00012697 0.28889 0.00013108 453.737960807875 458.741782253207 72.324 0.60565 72.324 72.006 72.611 0 122 44 4 0 0 0 0.029075 1 42255 70.912 44.804 1 3.8867 4.0682 0 12757000 2923300 9833300 25867 1527 9778 10045 40470 40470 NFDLRPGVIVR 11 0 2 Unmodified _NFDLRPGVIVR_ 0 0 1 A0A140VJP5;P31153;B4DEX8;B4E1K2;B4DN74;B4DFQ8;A8K455;Q00266 A0A140VJP5 A0A140VJP5 MAT2A;MAT1A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase;S-adenosylmethionine synthase isoform type-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.9232 3 429.250695 1284.73025 91485.6 0.12693 5.4484E-05 0.059635 2.5598E-05 0.18656 8.0083E-05 429.250976361087 435.923033379258 79.729 0.76931 79.729 79.438 80.207 0 228 66 6 0 0 0 0.031072 1 47210 40.496 29.177 1 1.5139 1.6388 0 22982000 8795800 14187000 25868 606 9779 10046 40471 40471 NFDLRPGVIVR 11 0 2 Unmodified _NFDLRPGVIVR_ 0 0 1 A0A140VJP5;P31153;B4DEX8;B4E1K2;B4DN74;B4DFQ8;A8K455;Q00266 A0A140VJP5 A0A140VJP5 MAT2A;MAT1A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase;S-adenosylmethionine synthase isoform type-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 435.9225 3 429.250695 1284.73025 92086.06 -0.36613 -0.00015716 0.047945 2.058E-05 -0.31818 -0.00013658 429.25078995733 435.922923211512 90.227 0.45937 90.227 90.024 90.484 0 129 32 6 0 0 0 0.047824 2 49112 29.341 29.341 1 1.3438 1.2139 0 2901300 1281800 1619500 25869 606 9779 10046 40472;40473 40472 NFDMVIVYK 9 1 0 Oxidation (M) _NFDM(ox)VIVYK_ NFDM(1)VIVYK NFDM(57.18)VIVYK 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.7893 2 572.788992 1143.56343 80385.19 0.45651 0.00026148 0.62884 0.00036019 1.0853 0.00062167 572.789238318745 576.796571088137 76.889 0.56612 76.889 76.642 77.208 0 215 49 5 0 0 0 0.0061872 2 45318 57.177 39.192 1 1.2593 1.2707 0 27320000 13566000 13754000 25870 2148 9780 10047 40474;40475 40474 1996 NFDMVIVYK 9 1 0 Oxidation (M) _NFDM(ox)VIVYK_ NFDM(1)VIVYK NFDM(89.35)VIVYK 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.789 2 572.788992 1143.56343 77878.93 0.44062 0.00025238 -0.10382 -5.9469E-05 0.3368 0.00019291 572.788754932712 576.796333124279 77.481 0.67398 77.481 77.187 77.861 0 160 54 4 0 0 0 0.0005548 1 45848 89.355 63.618 1 1.2299 1.2113 0 19668000 9776900 9890700 25871 2148 9780 10047 40476 40476 1996 NFDMVIVYK 9 1 0 Oxidation (M) _NFDM(ox)VIVYK_ NFDM(1)VIVYK NFDM(61.09)VIVYK 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.7966 2 572.788992 1143.56343 79780.11 0.49148 0.00028151 -0.54337 -0.00031124 -0.051896 -2.9725E-05 572.789239757741 576.796481086952 75.909 0.69283 75.909 75.59 76.283 0 262 63 6 0 0 0 0.004086 2 45730 61.09 39.408 1 1.2694 1.3974 0 42867000 20628000 22239000 25872 2148 9780 10047 40477;40478 40478 1996 NFDMVIVYK 9 1 0 Oxidation (M) _NFDM(ox)VIVYK_ NFDM(1)VIVYK NFDM(45.08)VIVYK 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.7969 2 572.788992 1143.56343 81743.57 0.62897 0.00036027 0.52461 0.00030049 1.1536 0.00066076 572.789069399545 576.796299736516 110.12 0.54848 110.12 109.89 110.44 0 94 28 4 0 0 0 0.01569 1 63617 45.081 28.305 1 1.0692 0.90338 0 1979600 871620 1108000 25873 2148 9780 10047 40479 40479 1996 NFDMVIVYK 9 1 0 Unmodified _NFDMVIVYK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.7992 2 564.791535 1127.56852 81433.79 0.72717 0.0004107 0.2561 0.00014464 0.98327 0.00055534 564.792230535575 568.798477607383 109.95 0.64972 109.95 109.69 110.34 0 154 33 6 0 0 0 0.026156 1 62540 47.574 37.663 1 0.9723 0.79747 0 5309400 2523200 2786300 25874 2148 9780 10048 40480 40480 NFEALNAR 8 0 1 Unmodified _NFEALNAR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7451 2 467.740691 933.466829 88608.9 0.4546 0.00021263 0.173 8.0919E-05 0.6276 0.00029355 467.740768403238 472.744887692743 41.166 0.95113 41.166 40.914 41.865 0 251 78 6 0 0 0 0.011932 1 21552 68.787 57.914 1 0.69673 0.78386 0 95944000 52373000 43571000 25875 515 9781 10049 40481 40481 NFEALNAR 8 0 1 Unmodified _NFEALNAR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7449 2 467.740691 933.466829 87721.41 0.3966 0.00018551 0.20943 9.7959E-05 0.60603 0.00028346 467.740736362987 472.744922331998 40.149 0.49555 40.149 39.914 40.409 0 189 42 6 0 0 0 0.0064228 1 21307 87.323 74.966 1 0.70116 0.80976 0 248710000 145140000 103570000 25876 515 9781 10049 40482 40482 NFEALNAR 8 0 1 Unmodified _NFEALNAR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 472.7448 2 467.740691 933.466829 87322.89 -0.06469 -3.0258E-05 0.32431 0.00015169 0.25962 0.00012143 467.740862617262 472.744885014871 46.844 0.73941 46.844 46.48 47.219 0 208 50 7 0 0 0 0.017078 1 22029 60.682 54.043 1 1.6904 1.371 0 11981000 4497700 7483600 25877 515 9781 10049 40483 40483 NFEHLIPDAPELIHDFLVNEK 21 1 0 Unmodified _NFEHLIPDAPELIHDFLVNEK_ 0 0 0 P53618;E9PP73 P53618 P53618 COPB1 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.7671 3 830.760301 2489.25907 65583.06 1.0838 0.0009004 0.1353 0.00011241 1.2191 0.0010128 831.429322664692 833.766092836228 132.86 0.27382 132.86 132.75 133.03 0 73 14 9 0 0 0 8.5747E-16 2 89063 101.71 101.71 1 1.4693 1.4668 0 14257000 4834900 9422100 25878 1606 9782 10050 40484;40485 40485 NFEVEADDLVTISELGR 17 0 1 Unmodified _NFEVEADDLVTISELGR_ 0 0 0 C7DUW4;Q6FI23;Q6FHG1;Q53EZ9;P46734;E9PRZ0;J3QR49 C7DUW4 C7DUW4 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 958.9774 2 953.97327 1905.93199 63610.45 0.82713 0.00078906 -0.55066 -0.00052532 0.27647 0.00026374 954.474053381174 959.478394691984 121.32 0.44955 121.32 121.12 121.57 0 45 28 4 0 0 0 7.0825E-06 2 78435 86.291 83.34 1 1.6499 1.6915 0 6538700 2683500 3855200 25879 1124 9783 10051 40486;40487 40487 NFEVEADDLVTISELGR 17 0 1 Unmodified _NFEVEADDLVTISELGR_ 0 0 0 C7DUW4;Q6FI23;Q6FHG1;Q53EZ9;P46734;E9PRZ0;J3QR49 C7DUW4 C7DUW4 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 958.9792 2 953.97327 1905.93199 NaN NaN NaN -0.2964 -0.00028276 NaN NaN NaN NaN 120.98 0.41376 120.98 120.67 121.09 0 0 0 0 2.4007E-05 1 79943 77.776 61.638 1 NaN NaN 0 10460000 0 10460000 25880 1124 9783 10051 40488 40488 NFEWVAER 8 0 1 Unmodified _NFEWVAER_ 0 0 0 E9PBS1;A0A024RD93;P22234;D6RF62;B4DGX3 E9PBS1 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7581 2 525.753798 1049.49304 87052.11 0.18793 9.8807E-05 0.39009 0.00020509 0.57803 0.0003039 525.753822882783 530.757959225096 69.512 0.4459 69.512 69.282 69.728 0 95 37 4 0 0 0 0.020824 1 41381 58.23 49.317 1 1.1078 1.1056 0 8986500 4729300 4257200 25881 380 9784 10052 40489 40489 NFFNELSHK 9 1 0 Unmodified _NFFNELSHK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.189 3 379.189212 1134.54581 100134.8 0.44093 0.00016719 0.12273 4.6539E-05 0.56366 0.00021373 379.189133619726 381.860685333643 59.499 0.15991 59.499 59.406 59.566 3.8147E-06 46 11 6 0 0 0 0.0014636 1 33893 68.456 65.154 1 0.80998 0.8049 0 26099000 14836000 11263000 25882 908 9785 10053 40490 40490 NFFNELSHK 9 1 0 Unmodified _NFFNELSHK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.189 3 379.189212 1134.54581 101417.1 0.1701 6.4502E-05 -0.1561 -5.9192E-05 0.014003 5.3098E-06 379.189104746293 381.860526820103 57.91 0.46811 57.91 57.745 58.213 0 94 37 4 0 0 0 0.03694 1 33565 27.982 27.982 1 1.1939 1.251 0 10749000 5696200 5052700 25883 908 9785 10053 40491 40491 NFFNELSHK 9 1 0 Unmodified _NFFNELSHK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.2806 2 568.28018 1134.54581 NaN NaN NaN -0.12389 -7.0405E-05 NaN NaN NaN NaN 57.946 0.68923 57.946 57.685 58.374 -3.8147E-06 0 0 0 1.9914E-07 1 33499 123.98 98.246 1 NaN NaN 0 73129000 73129000 0 25884 908 9785 10053 40492 40492 NFFNELSHK 9 1 0 Unmodified _NFFNELSHK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.2884 2 568.28018 1134.54581 NaN NaN NaN -1.678 -0.0009536 NaN NaN NaN NaN 57.918 1.1349 57.918 57.239 58.374 0 0 0 0 3.0873E-07 1 33580 120.15 105.49 1 NaN NaN 0 68160000 0 68160000 25885 908 9785 10053 40493 40493 NFFNELSHK 9 1 0 Unmodified _NFFNELSHK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.2874 2 568.28018 1134.54581 78592.52 0.41351 0.00023499 0.096816 5.5019E-05 0.51032 0.00029001 568.280214468271 572.28716737031 68.95 0.94279 68.95 68.567 69.509 0 369 65 8 0 0 0 0.021483 1 35973 49.444 49.444 1 1.5718 1.279 0 30570000 11374000 19196000 25886 908 9785 10053 40494 40494 NFFNELSHK 9 1 0 Unmodified _NFFNELSHK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.2878 2 568.28018 1134.54581 79549.41 0.46357 0.00026344 0.06032 3.4279E-05 0.52389 0.00029772 568.280098392275 572.287270889359 69.165 1.0881 69.165 68.733 69.821 0 406 76 8 0 0 0 0.0016421 2 35351 82.75 78.911 1 1.5451 1.2481 0 23586000 9014100 14572000 25887 908 9785 10053 40495;40496 40496 NFFVNYR 7 0 1 Unmodified _NFFVNYR_ 0 0 0 Q9UKL0;Q9P2K3;H0YF22 Q9UKL0 Q9UKL0 RCOR1;RCOR3 REST corepressor 1;REST corepressor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.2404 2 480.240327 958.466101 89354.84 0.031637 1.5193E-05 0.11049 5.3061E-05 0.14213 6.8255E-05 480.240280309597 485.244522351212 70.148 0.40614 70.148 69.886 70.292 0 105 32 5 0 0 0 0.017829 1 41822 96.666 89.099 1 0.75008 0.74104 0 12663000 8845400 3818000 25888 2106 9786 10054 40497 40497 NFGAENPDPFVPVLSTAVK 19 1 0 Unmodified _NFGAENPDPFVPVLSTAVK_ 0 0 0 B2RWN5;B4E263;Q8N7L7 B2RWN5 B2RWN5 HEATR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1005.5261 2 1001.51765 2001.02074 60940.36 0.81325 0.00081448 -0.17103 -0.00017129 0.64221 0.00064319 1001.51698557046 1006.02598789596 119.12 1.1069 119.12 118.47 119.58 0 345 68 10 0 0 0 7.0489E-12 1 76446 102.52 102.52 1 0.84389 0.95232 0 110170000 57359000 52815000 25889 897 9787 10055 40498 40498 NFGAENPDPFVPVLSTAVK 19 1 0 Unmodified _NFGAENPDPFVPVLSTAVK_ 0 0 0 B2RWN5;B4E263;Q8N7L7 B2RWN5 B2RWN5 HEATR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1005.5254 2 1001.51765 2001.02074 60895.79 0.42151 0.00042215 -0.14899 -0.00014922 0.27252 0.00027293 1001.51700589913 1005.52492090029 118.65 1.1393 118.65 117.92 119.06 0 312 71 10 0 0 0 6.3919E-08 1 77910 87.498 87.498 1 0.82716 0.93281 0 125780000 69616000 56164000 25890 897 9787 10055 40499 40499 NFGAENPDPFVPVLSTAVK 19 1 0 Unmodified _NFGAENPDPFVPVLSTAVK_ 0 0 0 B2RWN5;B4E263;Q8N7L7 B2RWN5 B2RWN5 HEATR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1006.0296 2 1001.51765 2001.02074 60824.62 0.31772 0.0003182 -0.1524 -0.00015263 0.16532 0.00016557 1002.01884507284 1006.0262272945 131.39 1.4835 131.39 130.7 132.18 0 337 67 10 0 0 0 1.295E-05 2 79635 69.92 69.92 1 1.1691 0.98943 0 58701000 25877000 32824000 25891 897 9787 10055 40500;40501 40500 NFGAENPDPFVPVLSTAVK 19 1 0 Unmodified _NFGAENPDPFVPVLSTAVK_ 0 0 0 B2RWN5;B4E263;Q8N7L7 B2RWN5 B2RWN5 HEATR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1005.5258 2 1001.51765 2001.02074 60737.8 0.53245 0.00053326 -0.034893 -3.4946E-05 0.49756 0.00049831 1002.01898750595 1006.02607816617 131.17 0.94408 131.17 130.9 131.85 0 296 39 12 0 0 0 2.9423E-05 1 78580 56.569 54.804 1 1.2064 1.0238 0 69293000 30968000 38325000 25892 897 9787 10055 40502 40502 NFGASLLLPGLK 12 1 0 Unmodified _NFGASLLLPGLK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;D6RH20;D6RJC7 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3739 2 615.366256 1228.71796 79540.44 0.65588 0.00040361 0.099617 6.1301E-05 0.7555 0.00046491 615.366183837067 619.373240320753 117.38 0.77996 117.38 117.11 117.89 -7.6294E-06 199 54 6 0 0 0 0.00018296 2 74999 75.294 69.986 1 1.307 1.355 0 12606000 5954400 6651300 25893 305 9788 10056 40503;40504 40503 NFGASLLLPGLK 12 1 0 Unmodified _NFGASLLLPGLK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;D6RH20;D6RJC7 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.3733 2 615.366256 1228.71796 78208.13 0.41817 0.00025733 0.28136 0.00017314 0.69953 0.00043047 615.366110316258 619.373435780993 116.77 0.6114 116.77 116.52 117.13 0 153 37 6 0 0 0 0.00023876 2 76390 86.624 81.143 1 1.3108 1.3218 0 13347000 6615700 6730900 25894 305 9788 10056 40505;40506 40506 NFGASLLLPGLK 12 1 0 Unmodified _NFGASLLLPGLK_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;D6RH20;D6RJC7 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 619.3738 2 615.366256 1228.71796 78911.69 0.81805 0.0005034 -0.48983 -0.00030143 0.32822 0.00020198 615.365955308136 619.372907634467 129.16 0.4641 129.16 128.92 129.38 0 58 19 4 0 0 0 0.050203 1 77152 32.606 27.993 1 1.0903 0.95885 0 1128500 537420 591090 25895 305 9788 10056 40507 40507 NFGEEVDDESLK 12 1 0 Unmodified _NFGEEVDDESLK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;H0YCC8 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.3165 2 691.309529 1380.6045 73319.13 0.48068 0.0003323 0.19624 0.00013566 0.67692 0.00046796 691.309542855908 695.316696647675 58.587 0.81522 58.587 58.335 59.151 0 276 65 7 0 0 0 5.0945E-08 2 33129 113.93 113.93 1 2.2392 2.4156 0 41680000 12945000 28735000 25896 818 9789 10057 40508;40509 40508 NFGEEVDDESLK 12 1 0 Unmodified _NFGEEVDDESLK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;H0YCC8 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.3098 2 691.309529 1380.6045 73353.05 0.69818 0.00048266 0.06815 4.7113E-05 0.76633 0.00052977 691.309512788125 695.316617064169 57.532 0.47628 57.532 57.314 57.791 0 209 38 8 0 0 0 1.6602E-08 2 33387 121.6 121.6 1 2.3431 2.6317 0 55724000 16406000 39318000 25897 818 9789 10057 40510;40511 40511 NFGEEVDDESLK 12 1 0 Unmodified _NFGEEVDDESLK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;H0YCC8 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.3107 2 691.309529 1380.6045 74396.94 0.41026 0.00028362 1.2184 0.0008423 1.6287 0.0011259 691.31085571228 695.31683083693 68.329 0.70435 68.329 68.008 68.712 0 182 50 7 0 0 0 0.057368 1 35653 31.431 31.431 1 1.6358 1.2933 0 6132600 2328800 3803800 25898 818 9789 10057 40512 40512 NFGFSLQDALSR 12 0 1 Unmodified _NFGFSLQDALSR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.8457 2 677.841133 1353.66771 75438.98 1.1716 0.00079419 -0.57008 -0.00038642 0.60157 0.00040777 677.840675706446 682.845100674921 110.44 0.46927 110.44 110.18 110.65 0 119 34 5 0 0 0 0.00050599 1 69325 69.979 51.668 1 0.75809 0.7873 0 22400000 14509000 7890500 25899 1738 9790 10058 40513 40513 NFGFSLQDALSR 12 0 1 Unmodified _NFGFSLQDALSR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8419 2 677.841133 1353.66771 75710.2 0.80361 0.00054472 -0.22237 -0.00015073 0.58123 0.00039398 677.841003141527 682.845452557782 109.87 0.48521 109.87 109.57 110.06 0 112 31 5 0 0 0 2.0378E-05 2 70578 103.22 84.909 1 0.75658 0.74339 0 14223000 7322700 6900200 25900 1738 9790 10058 40514;40515 40514 NFGGTVSIIPVGEAK 15 1 0 Unmodified _NFGGTVSIIPVGEAK_ 0 0 0 Q15058 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.9147 2 744.906473 1487.79839 NaN NaN NaN 0.69868 0.00052045 NaN NaN NaN NaN 112.54 0.39163 112.54 112.41 112.8 7.6294E-06 0 0 0 0.0436 1 64472 38.021 20.995 1 NaN NaN 0 1083100 0 1083100 25901 1751 9791 10059 40516 40516 NFGIGQDIQPK 11 1 0 Unmodified _NFGIGQDIQPK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.827 2 608.81967 1215.62479 76991.52 0.38227 0.00023273 0.064021 3.8977E-05 0.44629 0.00027171 608.819861394843 612.826711638709 68.398 1.8148 68.398 67.908 69.723 0 905 157 12 0 0 0 4.8079E-10 4 39939 130.41 124.92 1 0.90168 1.0781 0 831870000 438020000 393850000 25902 1648 9792 10060 40517;40518;40519;40520 40519 NFGIGQDIQPK 11 1 0 Unmodified _NFGIGQDIQPK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8273 2 608.81967 1215.62479 NaN NaN NaN -0.47405 -0.00028861 NaN NaN NaN NaN 69.986 0.20334 69.986 69.928 70.132 -7.6294E-06 0 0 0 0.038372 1 40749 47.706 32.555 1 NaN NaN 0 5711600 0 5711600 25903 1648 9792 10060 40521 40521 NFGIGQDIQPK 11 1 0 Unmodified _NFGIGQDIQPK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8269 2 608.81967 1215.62479 77218.85 0.52422 0.00031915 -0.067509 -4.1101E-05 0.45671 0.00027805 608.819873469355 612.826650995377 67.204 1.1861 67.204 66.795 67.981 7.6294E-06 604 100 13 0 0 0 0.000286 2 39591 89.08 89.08 1 0.89493 1.0568 0 1113000000 589870000 523110000 25904 1648 9792 10060 40522;40523 40522 NFGIGQDIQPK 11 1 0 Unmodified _NFGIGQDIQPK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8271 2 608.81967 1215.62479 77326.16 0.37424 0.00022784 -0.17116 -0.00010421 0.20308 0.00012364 608.819360362759 612.826893823524 67.56 1.1457 67.56 67.523 68.669 0 280 95 5 0 0 0 6.7214E-10 2 40121 127.4 127.4 1 0.86692 0.96853 0 89458000 48595000 40863000 25905 1648 9792 10060 40524;40525 40524 NFGIGQDIQPK 11 1 0 Unmodified _NFGIGQDIQPK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8267 2 608.81967 1215.62479 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.996 1 68.996 68.496 69.496 0 0 0 0 0.016584 1 41031 55.064 33.557 1 25906 1648 9792 10060 40526 40526 NFGIGQDIQPK 11 1 0 Unmodified _NFGIGQDIQPK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.8267 2 608.81967 1215.62479 77328.12 0.38211 0.00023264 0.059282 3.6092E-05 0.4414 0.00026873 608.819844358049 612.826766337411 78.168 2.5122 78.168 77.775 80.287 -7.6294E-06 783 156 13 0 0 0 0.00039395 4 41788 81.95 81.95 1 0.8326 0.72194 0 127050000 68311000 58737000 25907 1648 9792 10060 40527;40528;40529;40530 40527 NFGIGQDIQPK 11 1 0 Unmodified _NFGIGQDIQPK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.8273 2 608.81967 1215.62479 77198.67 0.48814 0.00029719 -0.071282 -4.3398E-05 0.41686 0.00025379 608.819696271207 612.826723407986 78.454 2.3957 78.454 78.125 80.521 0 797 148 12 0 0 0 0.00040918 3 41142 80.755 80.755 1 0.81718 0.69939 0 118710000 65130000 53578000 25908 1648 9792 10060 40531;40532;40533 40532 NFGIWLR 7 0 1 Unmodified _NFGIWLR_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.2531 2 453.253237 904.491922 88104.4 0.095184 4.3142E-05 0.062288 2.8232E-05 0.15747 7.1375E-05 453.253160950869 458.257284777371 99.326 1.7255 99.326 98.661 100.39 0 643 145 7 0 0 0 0.013378 4 61042 102.98 79.008 1 0.70581 0.81142 0 142990000 83711000 59279000 25909 1003 9793 10061 40534;40535;40536;40537 40537 NFGIWLR 7 0 1 Unmodified _NFGIWLR_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.2532 2 453.253237 904.491922 89493.43 0.30366 0.00013763 0.04128 1.871E-05 0.34494 0.00015634 453.253154413937 458.25727722138 98.197 1.7125 98.197 97.624 99.337 0 728 144 8 0 0 0 0.016896 3 61144 97.596 72.138 1 0.71482 0.82931 0 323530000 187810000 135710000 25910 1003 9793 10061 40538;40539;40540 40538 NFGIWLR 7 0 1 Unmodified _NFGIWLR_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.2534 2 453.253237 904.491922 89847.55 0.27123 0.00012294 -0.14015 -6.3524E-05 0.13108 5.9412E-05 453.253038660755 458.25726818183 99.225 0.74698 99.225 99.022 99.769 0 145 61 4 0 0 0 0.026804 1 62251 79.454 58.899 1 0.57132 0.56667 0 15868000 8391400 7476800 25911 1003 9793 10061 40541 40541 NFGIWLR 7 0 1 Unmodified _NFGIWLR_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.2531 2 453.253237 904.491922 NaN NaN NaN -0.31249 -0.00014164 NaN NaN NaN NaN 99.962 0.51842 99.962 99.769 100.29 0 0 0 0 0.032162 1 62846 74.717 48.89 1 NaN NaN 0 3100500 3100500 0 25912 1003 9793 10061 40542 40542 NFGSYVTHETK 11 1 0 Unmodified _NFGSYVTHETK_ 0 0 0 Q6FGH9;Q96FJ2;P63167 Q6FGH9 Q6FGH9 DNCL1;DYNLL2;DYNLL1 Dynein light chain 2, cytoplasmic;Dynein light chain 1, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.815 2 641.806759 1281.59897 75255.59 0.98988 0.00063531 -0.11959 -7.6754E-05 0.87029 0.00055856 641.806803623046 645.813792806476 32.3 0.92454 32.3 31.809 32.734 0 462 84 8 0 0 0 7.492E-08 4 15749 113.46 102.29 1 1.1677 1.3315 0 174980000 77244000 97731000 25913 1654 9794 10062 40543;40544;40545;40546 40543 NFGSYVTHETK 11 1 0 Unmodified _NFGSYVTHETK_ 0 0 0 Q6FGH9;Q96FJ2;P63167 Q6FGH9 Q6FGH9 DNCL1;DYNLL2;DYNLL1 Dynein light chain 2, cytoplasmic;Dynein light chain 1, cytoplasmic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.8079 2 641.806759 1281.59897 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.712 1 32.712 32.212 33.212 0 0 0 0 0.011916 1 16270 59.426 48.902 1 25914 1654 9794 10062 40547 40547 NFGSYVTHETK 11 1 0 Unmodified _NFGSYVTHETK_ 0 0 0 Q6FGH9;Q96FJ2;P63167 Q6FGH9 Q6FGH9 DNCL1;DYNLL2;DYNLL1 Dynein light chain 2, cytoplasmic;Dynein light chain 1, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.8083 2 641.806759 1281.59897 75436.19 0.54698 0.00035105 0.027395 1.7582E-05 0.57437 0.00036863 641.806812927298 645.81385823003 31.107 0.91259 31.107 30.764 31.676 0 407 80 9 0 0 0 3.2775E-17 2 15235 160.33 149.17 1 1.1454 1.3333 0 243000000 115330000 127670000 25915 1654 9794 10062 40548;40549 40549 NFGSYVTHETK 11 1 0 Unmodified _NFGSYVTHETK_ 0 0 0 Q6FGH9;Q96FJ2;P63167 Q6FGH9 Q6FGH9 DNCL1;DYNLL2;DYNLL1 Dynein light chain 2, cytoplasmic;Dynein light chain 1, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.8067 2 641.806759 1281.59897 74407.16 0.47982 0.00030795 0.22143 0.00014212 0.70126 0.00045007 641.806822187906 645.813945945396 37.03 1.4227 37.03 36.684 38.107 0 523 117 8 0 0 0 0.0011148 3 16554 69.979 59.72 1 1.552 1.271 0 35585000 13439000 22146000 25916 1654 9794 10062 40550;40551;40552 40551 NFGSYVTHETK 11 1 0 Unmodified _NFGSYVTHETK_ 0 0 0 Q6FGH9;Q96FJ2;P63167 Q6FGH9 Q6FGH9 DNCL1;DYNLL2;DYNLL1 Dynein light chain 2, cytoplasmic;Dynein light chain 1, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.8068 2 641.806759 1281.59897 75032.42 0.45473 0.00029185 0.034654 2.2241E-05 0.48938 0.00031409 641.806747767969 645.813888032661 36.889 1.1597 36.889 36.57 37.73 0 446 96 8 0 0 0 0.0021378 3 16052 62.166 62.166 1 1.5137 1.2589 0 38405000 15229000 23176000 25917 1654 9794 10062 40553;40554;40555 40554 NFGTVLR 7 0 1 Unmodified _NFGTVLR_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.7332 2 403.729595 805.444637 NaN NaN NaN 0.24495 9.8892E-05 NaN NaN NaN NaN 51.157 0.34575 51.157 50.933 51.279 3.8147E-06 0 0 0 0.048672 1 28246 58.981 33.983 1 NaN NaN 0 9609700 0 9609700 25918 1224 9795 10063 40556 40556 NFGTVLR 7 0 1 Unmodified _NFGTVLR_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.7335 2 403.729595 805.444637 NaN NaN NaN 0.089778 3.6246E-05 NaN NaN NaN NaN 49.786 0.35071 49.786 49.588 49.939 -3.8147E-06 0 0 0 0.048672 1 28041 58.981 33.983 1 NaN NaN 0 4675600 0 4675600 25919 1224 9795 10063 40557 40557 NFHVFYQLLSGASEELLNK 19 1 0 Unmodified _NFHVFYQLLSGASEELLNK_ 0 0 0 E9PDF6;B0I1S9;O43795;E7EQD9;Q05CR5 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.0486 3 737.047783 2208.12152 70866.84 0.90134 0.00066433 0.74495 0.00054907 1.6463 0.0012134 737.049487337084 740.053546359052 133.03 0.381 133.03 132.81 133.19 0 42 14 9 0 0 0 3.1688E-06 2 87027 73.138 68.521 1 1.4649 1.4449 0 9242300 3638800 5603500 25920 805 9796 10064 40558;40559 40559 NFHVFYQLLSGASEELLNK 19 1 0 Unmodified _NFHVFYQLLSGASEELLNK_ 0 0 0 E9PDF6;B0I1S9;O43795;E7EQD9;Q05CR5 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.0534 3 737.047783 2208.12152 71165.33 1.0162 0.00074897 -0.10477 -7.7222E-05 0.9114 0.00067175 737.38228568433 739.718795392795 132.99 0.27612 132.99 132.88 133.16 0 44 12 8 0 0 0 1.088E-06 2 89203 82.482 82.482 1 1.6627 1.6823 0 16456000 5946500 10510000 25921 805 9796 10064 40560;40561 40560 NFIGDYIGMEEHPELQQFVGK 21 1 0 Oxidation (M) _NFIGDYIGM(ox)EEHPELQQFVGK_ NFIGDYIGM(1)EEHPELQQFVGK NFIGDYIGM(64.2)EEHPELQQFVGK 0 1 0 Q4KMR3;Q12965;H0YNQ8 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.0652 3 823.05813 2466.15256 69056.02 0.55202 0.00045435 0.027721 2.2816E-05 0.57974 0.00047716 823.392227523291 825.729654481009 109.81 0.49554 109.81 109.53 110.03 0 140 37 6 0 0 0 3.4731E-08 2 68803 64.203 64.203 1 1.0958 1.1656 0 16043000 6866100 9177200 25922 1703 9797 10065 40562;40563 40563 1535 NFILDQTNVSAAAQR 15 0 1 Unmodified _NFILDQTNVSAAAQR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.4293 2 824.426093 1646.83763 66888.62 0.70896 0.00058449 0.25313 0.00020869 0.96209 0.00079317 824.426267140225 829.430454595615 83.173 1.166 83.173 82.761 83.928 0 598 98 9 0 0 0 7.3823E-71 2 49652 208.79 208.79 1 1.0144 1.1952 0 239090000 118590000 120500000 25923 999 9798 10066 40564;40565 40564 NFILDQTNVSAAAQR 15 0 1 Unmodified _NFILDQTNVSAAAQR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.4266 2 824.426093 1646.83763 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.441 1 84.441 83.941 84.941 0 0 0 0 0.0043757 1 50620 53.967 30.74 1 25924 999 9798 10066 40566 40566 NFILDQTNVSAAAQR 15 0 1 Unmodified _NFILDQTNVSAAAQR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.4301 2 824.426093 1646.83763 66790.32 0.68349 0.00056349 0.12152 0.00010018 0.80501 0.00066367 824.42622701674 829.430364907193 82.267 1.357 82.267 81.746 83.103 0 648 115 10 0 0 0 5.2298E-22 4 50065 143.97 143.97 1 1.0586 1.2242 0 264390000 128830000 135570000 25925 999 9798 10066 40567;40568;40569;40570 40567 NFILDQTNVSAAAQR 15 0 1 Unmodified _NFILDQTNVSAAAQR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 829.4307 2 824.426093 1646.83763 65643.2 0.88567 0.00073017 0.14414 0.00011883 1.0298 0.000849 824.426517090029 829.429900336679 95.017 1.5355 95.017 94.65 96.185 7.6294E-06 552 107 9 0 0 0 4.3618E-10 2 53147 113.95 97.748 1 0.71876 0.61158 0 35082000 20359000 14723000 25926 999 9798 10066 40571;40572 40572 NFILDQTNVSAAAQR 15 0 1 Unmodified _NFILDQTNVSAAAQR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.4295 2 824.426093 1646.83763 65172.07 0.71395 0.0005886 0.32557 0.00026841 1.0395 0.00085701 824.426660142647 829.43016344219 95.009 1.3704 95.009 94.634 96.004 0 477 93 9 0 0 0 2.1199E-47 2 52371 180.24 164.04 1 0.74327 0.64834 0 34765000 19942000 14822000 25927 999 9798 10066 40573;40574 40574 NFINNPLAQADWAAK 15 1 0 Unmodified _NFINNPLAQADWAAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 840.9335 2 836.925729 1671.8369 65870.09 1.0531 0.00088137 0.21462 0.00017962 1.2677 0.001061 836.925910260848 840.933002679226 108.38 0.7623 108.38 108.1 108.87 0 320 54 8 0 0 0 8.3252E-59 2 67727 199.43 199.43 1 1.421 1.6097 0 91014000 36984000 54030000 25928 81 9799 10067 40575;40576 40576 NFINNPLAQADWAAK 15 1 0 Unmodified _NFINNPLAQADWAAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.9334 2 836.925729 1671.8369 66849.28 0.88939 0.00074435 0.1347 0.00011273 1.0241 0.00085709 836.925704294135 840.932945316487 107.81 0.76776 107.81 107.49 108.26 -7.6294E-06 333 55 9 0 0 0 8.1874E-22 3 69004 140.24 140.24 1 1.3826 1.5582 0 68145000 27259000 40886000 25929 81 9799 10067 40577;40578;40579 40578 NFINNPLAQADWAAK 15 1 0 Unmodified _NFINNPLAQADWAAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.9332 2 836.925729 1671.8369 NaN NaN NaN -0.30589 -0.00025601 NaN NaN NaN NaN 119.49 0.6921 119.49 119.25 119.94 -7.6294E-06 0 0 0 2.8408E-69 1 70790 186.81 170.18 1 NaN NaN 0 23202000 0 23202000 25930 81 9799 10067 40580 40580 NFIVWLEDQK 10 1 0 Unmodified _NFIVWLEDQK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;G3V4E7 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.3478 2 646.337695 1290.66084 79462.83 0.87668 0.00056663 0.75128 0.00048558 1.628 0.0010522 646.337745524922 650.345505708915 113.17 0.61297 113.17 112.85 113.46 -7.6294E-06 117 44 6 0 0 0 0.0038105 1 71552 62.823 62.823 1 1.1703 1.1855 0 5776800 2912900 2863900 25931 1793 9800 10068 40581 40581 NFIVWLEDQK 10 1 0 Unmodified _NFIVWLEDQK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;G3V4E7 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.3464 2 646.337695 1290.66084 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.4 1 112.4 111.9 112.9 -7.6294E-06 0 0 0 0.00035294 1 72719 75.378 23.524 1 25932 1793 9800 10068 40582 40582 NFIVWLEDQK 10 1 0 Unmodified _NFIVWLEDQK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;G3V4E7 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.3473 2 646.337695 1290.66084 78725.3 0.82689 0.00053445 -0.012483 -8.0684E-06 0.81441 0.00052638 646.337921915272 650.344760270685 124.43 0.44301 124.43 124.24 124.68 0 61 18 6 0 0 0 0.022046 2 74566 46.001 46.001 1 1.3369 1.1287 0 1543500 586900 956650 25933 1793 9800 10068 40583;40584 40584 NFLTSLVAGLSTER 14 0 1 Unmodified _NFLTSLVAGLSTER_ 0 0 0 S4R3T2;H7BYG8;O94822 S4R3T2 S4R3T2 LTN1 E3 ubiquitin-protein ligase listerin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.4108 2 754.40938 1506.80421 NaN NaN NaN 0.26599 0.00020067 NaN NaN NaN NaN 130.86 0.12383 130.86 130.77 130.89 0 0 0 0 0.0020149 1 85362 67.153 50.929 1 NaN NaN 0 1056300 1056300 0 25934 1311 9801 10069 40585 40585 NFLTSLVAGLSTER 14 0 1 Unmodified _NFLTSLVAGLSTER_ 0 0 0 S4R3T2;H7BYG8;O94822 S4R3T2 S4R3T2 LTN1 E3 ubiquitin-protein ligase listerin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.4076 2 754.40938 1506.80421 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.27 1 130.27 129.77 130.77 0 0 0 0 0.0026183 1 87070 61.353 44.328 1 25935 1311 9801 10069 40586 40586 NFLVFQGAVESIAMK 15 1 0 Oxidation (M) _NFLVFQGAVESIAM(ox)K_ NFLVFQGAVESIAM(1)K NFLVFQGAVESIAM(91.94)K 0 1 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;Q68EN4;H0Y7K8;Q5H934 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 839.4448 2 835.434541 1668.85453 NaN NaN NaN 0.19 0.00015873 NaN NaN NaN NaN 117.66 0.47898 117.66 117.47 117.94 7.6294E-06 0 0 0 2.0005E-06 1 75274 91.937 77.779 1 NaN NaN 0 7392500 0 7392500 25936 1739 9802 10070 40587 40587 1572 NFLYAWCGK 9 1 0 Unmodified _NFLYAWCGK_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.7808 2 579.773677 1157.5328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.522 1 89.522 89.022 90.022 0 0 0 0 0.010186 1 54045 63.48 48.813 1 25937 1691 9803 10071 40588 40588 NFLYAWCGK 9 1 0 Unmodified _NFLYAWCGK_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.7803 2 579.773677 1157.5328 84916.02 0.37873 0.00021957 -0.35663 -0.00020676 0.022095 1.281E-05 579.772811906313 583.780587397124 101.51 0.33132 101.51 101.35 101.69 0 39 21 5 0 0 0 0.056712 1 56643 36.395 32.987 1 2.0761 1.7205 0 1740600 480410 1260200 25938 1691 9803 10071 40589 40589 NFMIDTYR 8 0 1 Oxidation (M) _NFM(ox)IDTYR_ NFM(1)IDTYR NFM(60.44)IDTYR 0 1 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.2525 2 538.247492 1074.48043 84709.7 0.8287 0.00044605 0.55219 0.00029721 1.3809 0.00074326 538.247762814766 543.251738592649 59.53 0.4601 59.53 59.263 59.723 3.8147E-06 109 35 4 0 0 0 0.0084556 1 33929 60.436 13.442 1 1.164 1.2012 0 24096000 10228000 13868000 25939 1798;321 9804 10072 40590 40590 245 NFMIDTYR 8 0 1 Oxidation (M) _NFM(ox)IDTYR_ NFM(1)IDTYR NFM(62.55)IDTYR 0 1 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.2516 2 538.247492 1074.48043 84722.97 0.74437 0.00040066 -0.11438 -6.1566E-05 0.62999 0.00033909 538.247600705603 543.251740809734 58.344 0.28885 58.344 58.213 58.502 0 67 19 5 0 0 0 0.0070918 2 33947 62.546 13.985 1 1.0109 1.1069 0 31003000 13089000 17914000 25940 1798;321 9804 10072 40591;40592 40592 245 NFNAFQK 7 1 0 Unmodified _NFNAFQK_ 0 0 0 A0A024R8V6;Q9P275;B3KMW2;K7EIH0;K7EKN3;K7EKL7 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 438.7263 2 434.719227 867.423902 92458.55 0.20404 8.8699E-05 -0.29352 -0.0001276 -0.089477 -3.8897E-05 434.719123298857 438.726083449574 36.122 0.46909 36.122 35.84 36.309 0 114 38 4 0 0 0 0.03065 1 18498 68.398 61.944 1 1.319 1.344 0 12252000 4748000 7504100 25941 260 9805 10073 40593 40593 NFPQTALVSFATTGEK 16 1 0 Unmodified _NFPQTALVSFATTGEK_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.4009 2 855.938502 1709.86245 65992.59 0.82984 0.00071029 -0.89772 -0.00076839 -0.067884 -5.8104E-05 856.439886825118 859.943194549053 118.91 0.59173 118.91 118.62 119.21 0 136 29 7 0 0 0 0.0057582 2 70411 35.737 30.13 1 0.76211 0.59107 0 3500500 1864500 1636000 25942 1913 9806 10074 40594;40595 40594 NFQIIEEDAALVEIGPR 17 0 1 Unmodified _NFQIIEEDAALVEIGPR_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 962.5052 2 957.501997 1912.98944 61972.41 0.88065 0.00084322 0.17341 0.00016604 1.0541 0.0010093 957.50222480376 962.50642188828 121.63 0.96077 121.63 121.34 122.3 0 325 63 8 0 0 0 4.7827E-09 2 78511 104.24 104.24 1 1.0301 1.0842 0 39888000 18381000 21507000 25943 1934 9807 10075 40596;40597 40596 NFQIIEEDAALVEIGPR 17 0 1 Unmodified _NFQIIEEDAALVEIGPR_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 962.9841 2 957.501997 1912.98944 62761.8 0.65121 0.00062353 0.34724 0.00033249 0.99845 0.00095602 958.002494721751 963.008808735525 122.33 0.24437 122.33 122.18 122.43 0 31 16 4 0 0 0 0.016871 1 79187 43.382 43.382 1 0.89248 0.93852 0 4204800 2495700 1709100 25944 1934 9807 10075 40598 40598 NFQIIEEDAALVEIGPR 17 0 1 Unmodified _NFQIIEEDAALVEIGPR_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 962.5063 2 957.501997 1912.98944 62527.34 0.85889 0.00082239 0.26508 0.00025381 1.124 0.0010762 958.003909542672 963.00755726818 121.22 0.9135 121.22 120.96 121.87 0 272 62 6 0 0 0 1.5128E-34 1 80165 159.5 159.5 1 1.017 1.1366 0 44534000 24187000 20347000 25945 1934 9807 10075 40599 40599 NFQIIEEDAALVEIGPR 17 0 1 Unmodified _NFQIIEEDAALVEIGPR_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 958.004 2 957.501997 1912.98944 62145.38 0.76716 0.00073456 0.48718 0.00046647 1.2543 0.001201 957.50235874434 963.007920940073 134.18 0.91422 134.18 133.64 134.56 -1.5259E-05 164 39 11 0 0 0 1.357E-09 2 81792 110.29 110.29 1 1.3753 1.1765 0 39626000 17059000 22567000 25946 1934 9807 10075 40600;40601 40600 NFQIIEEDAALVEIGPR 17 0 1 Unmodified _NFQIIEEDAALVEIGPR_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 962.5079 2 957.501997 1912.98944 62224.5 0.82461 0.00078957 0.57149 0.00054721 1.3961 0.0013368 958.004098663764 962.506466641296 133.99 1.1442 133.99 133.36 134.5 0 210 51 10 0 0 0 2.5509E-18 3 80752 134.21 134.21 1 1.4148 1.2341 0 31021000 12609000 18412000 25947 1934 9807 10075 40602;40603;40604 40602 NFQLMR 6 0 1 Oxidation (M) _NFQLM(ox)R_ NFQLM(1)R NFQLM(41.72)R 0 1 0 E9PEN0;B7Z6R2;A0A1B0GW41;Q8WYH8;A4KYM7;Q9UNL4;H0YEH7;E9PJ14;A4KYM5 E9PEN0 E9PEN0 ING5;ING4 Inhibitor of growth protein 5;Inhibitor of growth protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.7119 2 412.707805 823.401058 NaN NaN NaN -0.30532 -0.00012601 NaN NaN NaN NaN 34.715 0.53036 34.715 34.469 34.999 0 0 0 0 0.048543 1 17700 41.717 13.189 1 NaN NaN 0 3643200 0 3643200 25948 633 9808 10076 40605 40605 491 NFQNIFPPSATLHLSNIPPSVSEEDLK 27 1 0 Unmodified _NFQNIFPPSATLHLSNIPPSVSEEDLK_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;A0A0D9SF20 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1001.8505 3 998.845094 2993.51345 60635.33 0.81716 0.00081621 0.85428 0.00085329 1.6714 0.0016695 999.515336923908 1001.85114172578 118.99 1.1104 118.99 118.5 119.61 7.6294E-06 219 68 5 0 0 0 2.1663E-10 1 76259 52.321 52.321 1 1.1257 1.2063 0 32529000 15293000 17236000 25949 592 9809 10077 40606 40606 NFQNIFPPSATLHLSNIPPSVSEEDLK 27 1 0 Unmodified _NFQNIFPPSATLHLSNIPPSVSEEDLK_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;A0A0D9SF20 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1001.8514 3 998.845094 2993.51345 60910.43 0.41527 0.00041479 0.9729 0.00097177 1.3882 0.0013866 999.515991324825 1001.85134142129 118.41 1.166 118.41 117.89 119.06 0 290 73 6 0 0 0 9.2586E-16 1 77700 62.677 62.677 1 1.4585 1.4739 0 28659000 12162000 16498000 25950 592 9809 10077 40607 40607 NFQNIFPPSATLHLSNIPPSVTVDDLK 27 1 0 Unmodified _NFQNIFPPSATLHLSNIPPSVTVDDLK_ 0 0 0 A0A024R163;O95758 A0A024R163 A0A024R163 ROD1;PTBP3 Polypyrimidine tract-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 991.8618 3 988.853701 2963.53927 NaN NaN NaN -0.23662 -0.00023398 NaN NaN NaN NaN 123.9 0.73667 123.9 123.66 124.4 0 0 0 0 0.0079643 2 80284 28.951 22.656 1 NaN NaN 0 3515200 0 3515200 25951 71 9810 10078 40608;40609 40608 NFQNIFPPSATLHLSNIPPSVTVDDLK 27 1 0 Unmodified _NFQNIFPPSATLHLSNIPPSVTVDDLK_ 0 0 0 A0A024R163;O95758 A0A024R163 A0A024R163 ROD1;PTBP3 Polypyrimidine tract-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 991.8605 3 988.853701 2963.53927 NaN NaN NaN 0.61842 0.00061152 NaN NaN NaN NaN 123.24 0.17682 123.24 123.1 123.28 0 0 0 0 0.037541 1 81810 24.276 21.627 1 NaN NaN 0 2540300 0 2540300 25952 71 9810 10078 40610 40610 NFQPVIIFSFSK 12 1 0 Unmodified _NFQPVIIFSFSK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.8987 2 713.890095 1425.76564 73142.48 1.0378 0.00074084 0.45913 0.00032777 1.4969 0.0010686 714.3918949869 717.897572661725 123.27 0.50227 123.27 123.06 123.57 0 213 38 8 0 0 0 9.3989E-05 2 79839 96.143 90.679 1 1.032 1.0804 0 15150000 7411700 7738400 25953 1563 9811 10079 40611;40612 40611 NFQPVIIFSFSK 12 1 0 Unmodified _NFQPVIIFSFSK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.8914 2 713.890095 1425.76564 72818.03 1.0683 0.00076266 0.30833 0.00022012 1.3766 0.00098277 713.890068382453 717.897551091637 122.76 0.59395 122.76 122.47 123.07 7.6294E-06 219 46 8 0 0 0 4.62E-05 2 81383 98.943 86.896 1 1.0304 1.0545 0 17463000 8480500 8982300 25954 1563 9811 10079 40613;40614 40614 NFSGAELEGLVR 12 0 1 Unmodified _NFSGAELEGLVR_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3;Q96D47 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3398 2 646.335684 1290.65681 NaN NaN NaN 0.06455 4.1721E-05 NaN NaN NaN NaN 95.571 0.61766 95.571 95.339 95.957 0 0 0 0 0.025117 1 58041 49.35 29.564 1 NaN NaN 0 4551300 0 4551300 25955 1096 9812 10080 40615 40615 NFSGAELEGLVR 12 0 1 Unmodified _NFSGAELEGLVR_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3;Q96D47 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3389 2 646.335684 1290.65681 77534.9 0.78248 0.00050574 0.79825 0.00051593 1.5807 0.0010217 646.335275339461 651.842210763577 94.913 0.57664 94.913 94.553 95.129 0 179 48 6 0 0 0 0.0036902 1 58833 55.401 35.614 1 1.6753 1.6714 0 16674000 5349300 11324000 25956 1096 9812 10080 40616 40616 NFSVNLYK 8 1 0 Unmodified _NFSVNLYK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.7683 2 492.761092 983.507631 86587.73 0.3097 0.00015261 -0.44427 -0.00021892 -0.13457 -6.6311E-05 492.761094700065 496.768049864788 71.605 0.57967 71.605 71.41 71.99 0 203 49 6 0 0 0 0.012794 1 41738 66.799 45.499 1 1.0816 1.1766 0 48280000 24712000 23569000 25957 2147 9813 10081 40617 40617 NFSVNLYK 8 1 0 Unmodified _NFSVNLYK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.7684 2 492.761092 983.507631 86118.87 0.1655 8.1551E-05 -0.023218 -1.1441E-05 0.14228 7.011E-05 492.761034056942 496.768083663486 70.285 0.46596 70.285 70.087 70.553 0 165 38 6 0 0 0 0.0026205 2 41968 99.375 71.85 1 1.013 1.1398 0 56670000 25964000 30706000 25958 2147 9813 10081 40618;40619 40619 NFTMDTESSVYNFEGEDYR 19 0 1 Oxidation (M) _NFTM(ox)DTESSVYNFEGEDYR_ NFTM(1)DTESSVYNFEGEDYR NFTM(79.47)DTESSVYNFEGEDYR 0 1 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1165.4755 2 1160.47096 2318.92737 NaN NaN NaN 0.61913 0.00071848 NaN NaN NaN NaN 88.881 0.36742 88.881 88.665 89.033 0 0 0 0 1.2265E-07 2 53518 79.466 76.757 1 NaN NaN 0 7614500 0 7614500 25959 1391 9814 10082 40620;40621 40621 1066 NFTMDTESSVYNFEGEDYR 19 0 1 Oxidation (M) _NFTM(ox)DTESSVYNFEGEDYR_ NFTM(1)DTESSVYNFEGEDYR NFTM(78.81)DTESSVYNFEGEDYR 0 1 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1165.4786 2 1160.47096 2318.92737 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.088 1 88.088 87.588 88.588 0 0 0 0 2.7354E-06 1 54342 78.814 73.831 1 25960 1391 9814 10082 40622 40622 1066 NFTMDTESSVYNFEGEDYREK 21 1 1 Oxidation (M) _NFTM(ox)DTESSVYNFEGEDYREK_ NFTM(1)DTESSVYNFEGEDYREK NFTM(83.85)DTESSVYNFEGEDYREK 0 1 1 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 866.038 3 859.695586 2576.06493 64811.56 0.65431 0.00056251 -0.19381 -0.00016662 0.4605 0.00039589 860.029808260034 866.037198846181 76.861 0.91748 76.861 76.518 77.436 0 340 79 7 0 0 0 2.1269E-09 1 45436 83.849 83.849 1 3.1628 3.7299 0 35590000 9597200 25992000 25961 1391 9815 10083 40623 40623 1066 NFTMDTESSVYNFEGEDYREK 21 1 1 Oxidation (M) _NFTM(ox)DTESSVYNFEGEDYREK_ NFTM(1)DTESSVYNFEGEDYREK NFTM(106.86)DTESSVYNFEGEDYREK 0 1 1 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.0382 3 859.695586 2576.06493 65858.05 0.48699 0.00041867 -0.18367 -0.0001579 0.30333 0.00026077 860.02969979299 866.037275437604 75.886 0.81313 75.886 75.535 76.348 7.6294E-06 429 73 9 0 0 0 3.7055E-16 3 45812 106.86 106.86 1 3.1446 3.6761 0 50213000 14684000 35528000 25962 1391 9815 10083 40624;40625;40626 40625 1066 NFTMDTESSVYNFEGEDYREK 21 1 1 Oxidation (M) _NFTM(ox)DTESSVYNFEGEDYREK_ NFTM(1)DTESSVYNFEGEDYREK NFTM(41.62)DTESSVYNFEGEDYREK 0 1 1 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 865.7041 3 859.695586 2576.06493 64605.02 0.65413 0.00056235 -0.30217 -0.00025978 0.35195 0.00030257 860.029828801788 866.037252436679 88.321 1.0964 88.321 87.963 89.06 0 414 70 10 0 0 0 1.7361E-05 1 48536 41.615 41.615 1 4.1916 3.603 0 11376000 2107200 9269100 25963 1391 9815 10083 40627 40627 1066 NFTMDTESSVYNFEGEDYREK 21 1 1 Unmodified _NFTMDTESSVYNFEGEDYREK_ 0 0 1 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 860.7066 3 854.363947 2560.07001 NaN NaN NaN 0.29323 0.00025052 NaN NaN NaN NaN 99.921 0.42279 99.921 99.704 100.13 0 0 0 0 0.017094 2 55625 33.024 30.301 1 NaN NaN 0 2864600 0 2864600 25964 1391 9815 10084 40628;40629 40629 NFVNTFIQFK 10 1 0 Unmodified _NFVNTFIQFK_ 0 0 0 Q9Y232;C9JQG7;A8K8L0;A1L473;A8K8F3;C9JMH9;Q9Y6F8;Q9Y6F7 Q9Y232 Q9Y232 CDYL;CDY2B;CDY2A;CDY1 Chromodomain Y-like protein;Testis-specific chromodomain protein Y 1;Testis-specific chromodomain protein Y 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3426 2 629.334956 1256.65536 NaN NaN NaN -0.71045 -0.00044711 NaN NaN NaN NaN 110.91 0.60844 110.91 110.74 111.35 0 0 0 0 1.3937E-11 1 69877 127.02 113.44 1 NaN NaN 0 23765000 0 23765000 25965 2121 9816 10085 40630 40630 NFVNTFIQFK 10 1 0 Unmodified _NFVNTFIQFK_ 0 0 0 Q9Y232;C9JQG7;A8K8L0;A1L473;A8K8F3;C9JMH9;Q9Y6F8;Q9Y6F7 Q9Y232 Q9Y232 CDYL;CDY2B;CDY2A;CDY1 Chromodomain Y-like protein;Testis-specific chromodomain protein Y 1;Testis-specific chromodomain protein Y 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3416 2 629.334956 1256.65536 77177.59 0.60681 0.00038189 -0.59255 -0.00037291 0.014261 8.9749E-06 629.335042785066 633.341927728499 110.24 0.5721 110.24 110.08 110.65 -7.6294E-06 183 39 8 0 0 0 7.7357E-13 2 70934 149.65 149.65 1 1.006 1.1327 0 57816000 28422000 29394000 25966 2121 9816 10085 40631;40632 40632 NFVNTFIQFK 10 1 0 Unmodified _NFVNTFIQFK_ 0 0 0 Q9Y232;C9JQG7;A8K8L0;A1L473;A8K8F3;C9JMH9;Q9Y6F8;Q9Y6F7 Q9Y232 Q9Y232 CDYL;CDY2B;CDY2A;CDY1 Chromodomain Y-like protein;Testis-specific chromodomain protein Y 1;Testis-specific chromodomain protein Y 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.336 2 629.334956 1256.65536 78649.66 0.79174 0.00049827 0.12288 7.7334E-05 0.91462 0.0005756 629.335054505754 633.342116468305 122.27 0.75828 122.27 122.05 122.81 7.6294E-06 158 36 8 0 0 0 0.00085357 1 72861 80.165 80.165 1 1.4652 1.1866 0 23971000 9229000 14742000 25967 2121 9816 10085 40633 40633 NFVNTFIQFK 10 1 0 Unmodified _NFVNTFIQFK_ 0 0 0 Q9Y232;C9JQG7;A8K8L0;A1L473;A8K8F3;C9JMH9;Q9Y6F8;Q9Y6F7 Q9Y232 Q9Y232 CDYL;CDY2B;CDY2A;CDY1 Chromodomain Y-like protein;Testis-specific chromodomain protein Y 1;Testis-specific chromodomain protein Y 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.3424 2 629.334956 1256.65536 78250.87 0.91823 0.00057788 -0.032995 -2.0765E-05 0.88524 0.00055711 629.335034618646 633.341959594241 122.09 0.69847 122.09 121.81 122.51 0 147 33 7 0 0 0 5.7705E-08 2 71775 114.28 108.93 1 1.2918 1.0718 0 35843000 13998000 21844000 25968 2121 9816 10085 40634;40635 40634 NFVVVMVTK 9 1 0 Oxidation (M) _NFVVVM(ox)VTK_ NFVVVM(1)VTK NFVVVM(41.88)VTK 0 1 0 P54727;B4DEA3;Q53F10;B7Z4W4;Q5W0S5;B7ZA74;Q5W0S4;K7ENJ0;K7ELW1;A8K1J3;A0A024R7G8;P54725 P54727 P54727 RAD23B;RAD23A UV excision repair protein RAD23 homolog B;UV excision repair protein RAD23 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.8019 2 526.794078 1051.5736 89436.97 0.53172 0.00028011 -0.21113 -0.00011122 0.32059 0.00016888 526.793126160641 530.801405048929 70.667 0.31465 70.667 70.485 70.799 0 67 24 4 0 0 0 0.019571 1 42219 41.876 33.457 1 1.2732 1.3053 0 11801000 5352200 6449100 25969 1610 9817 10086 40636 40636 1398 NFVVVMVTKPK 11 2 0 Oxidation (M) _NFVVVM(ox)VTKPK_ NFVVVM(1)VTKPK NFVVVM(44.31)VTKPK 0 1 1 P54727;B4DEA3;Q53F10;B7Z4W4;Q5W0S5;B7ZA74;Q5W0S4 P54727 P54727 RAD23B UV excision repair protein RAD23 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.3675 2 639.367941 1276.72133 79642.1 0.50427 0.00032242 -0.34953 -0.00022348 0.15474 9.8939E-05 639.367721910824 647.382040935435 67.468 0.4399 67.468 67.287 67.727 -7.6294E-06 83 27 5 0 0 0 0.016451 1 34408 44.309 44.309 1 0.5058 0.43743 0 1084200 622760 461450 25970 1610 9818 10087 40637 40637 1398 NFWSVTHPAK 10 1 0 Unmodified _NFWSVTHPAK_ 0 0 0 A0A024R8V6;Q9P275;B3KMW2;K7EIH0;K7EKN3;K7EKL7;K7EIT7 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.8117 2 593.803823 1185.59309 82393.39 0.66659 0.00039582 0.11837 7.0287E-05 0.78495 0.00046611 593.803377336516 597.810984215832 57.232 0.31805 57.232 57.065 57.383 0 70 18 6 0 0 0 0.0067028 1 28295 58.433 52.952 1 1.5702 1.2999 0 1669100 554980 1114100 25971 260 9819 10088 40638 40638 NFYELSPHIFALSDEAYR 18 0 1 Unmodified _NFYELSPHIFALSDEAYR_ 0 0 0 E9PDF6;B0I1S9;O43795;E7EQD9;Q05CR5;C9JYW1;C9JUP5 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.3549 3 724.684733 2171.03237 72972.45 0.86125 0.00062413 0.47468 0.00034399 1.3359 0.00096812 725.018970216125 728.020834863166 125.15 0.405 125.15 124.97 125.38 7.6294E-06 66 16 6 0 0 0 0.05019 1 75073 13.23 10.177 1 2.2136 1.921 0 2423400 680850 1742500 25972 805 9820 10089 40639 40639 NFYELSPHIFALSDEAYR 18 0 1 Unmodified _NFYELSPHIFALSDEAYR_ 0 0 0 E9PDF6;B0I1S9;O43795;E7EQD9;Q05CR5;C9JYW1;C9JUP5 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.3558 3 724.684733 2171.03237 74361.46 0.83993 0.00060868 0.21314 0.00015446 1.0531 0.00076314 724.684807369597 728.355533003388 124.96 0.38435 124.96 124.79 125.18 0 67 17 5 0 0 0 0.0024365 1 74056 31.111 31.111 1 2.4999 2.1604 0 2716900 999680 1717200 25973 805 9820 10089 40640 40640 NFYLEEEDK 9 1 0 Unmodified _NFYLEEEDK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.7739 2 593.766768 1185.51898 79282.65 0.77278 0.00045885 0.016889 1.0028E-05 0.78966 0.00046888 593.766604738966 597.773719658294 55.782 0.94076 55.782 55.4 56.341 0 261 75 7 0 0 0 1.4999E-05 2 31275 122.52 110.92 1 0.91472 0.98379 0 38698000 21117000 17581000 25974 1813 9821 10090 40641;40642 40642 NFYLEEEDK 9 1 0 Unmodified _NFYLEEEDK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.7737 2 593.766768 1185.51898 78459.03 0.81073 0.00048138 1.4355 0.00085235 2.2462 0.0013337 593.766538089402 597.773572270975 54.667 0.87067 54.667 54.31 55.181 3.8147E-06 376 71 9 0 0 0 1.4999E-05 2 31175 122.52 113.16 1 1.0907 1.2076 0 45954000 19117000 26837000 25975 1813 9821 10090 40643;40644 40644 NFYLEEEDK 9 1 0 Unmodified _NFYLEEEDK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.7741 2 593.766768 1185.51898 78919.44 0.40311 0.00023935 0.095575 5.6749E-05 0.49869 0.0002961 593.766774734494 597.773874767516 64.337 1.2102 64.337 63.918 65.128 0 417 93 9 0 0 0 0.016954 2 33383 53.404 50.64 1 1.5487 1.2241 0 10589000 4114500 6474500 25976 1813 9821 10090 40645;40646 40646 NFYLEEEDK 9 1 0 Unmodified _NFYLEEEDK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.7737 2 593.766768 1185.51898 78917 0.36078 0.00021422 0.47043 0.00027932 0.83121 0.00049354 593.766713702344 597.773800545309 64.898 1.3161 64.898 64.424 65.74 0 474 104 7 0 0 0 0.041466 1 32969 41.448 37.402 1 1.6363 1.3417 0 8839300 3491700 5347600 25977 1813 9821 10090 40647 40647 NFYQEHPDLAR 11 0 1 Unmodified _NFYQEHPDLAR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRX8;J3QR02;C1IK54;X6RLV5 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.5599 3 463.889714 1388.64731 88367.66 0.45315 0.00021021 -0.3082 -0.00014297 0.14495 6.7243E-05 463.889481505165 467.225716011063 42.659 0.87185 42.659 42.267 43.139 0 280 69 6 0 0 0 0.0019801 2 22621 45.077 45.077 1 1.4777 1.5581 0 40171000 16308000 23862000 25978 1009 9822 10091 40648;40649 40648 NFYQEHPDLAR 11 0 1 Unmodified _NFYQEHPDLAR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRX8;J3QR02;C1IK54;X6RLV5 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.3312 2 695.330933 1388.64731 NaN NaN NaN 0.164 0.00011403 NaN NaN NaN NaN 42.668 0.39851 42.668 42.513 42.912 0 0 0 0 3.5382E-05 1 22691 101.11 84.08 1 NaN NaN 0 9388900 9388900 0 25979 1009 9822 10091 40650 40650 NFYQEHPDLAR 11 0 1 Unmodified _NFYQEHPDLAR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRX8;J3QR02;C1IK54;X6RLV5 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.3348 2 695.330933 1388.64731 79701.55 0.66161 0.00046004 0.64211 0.00044648 1.3037 0.00090652 695.331181612363 700.83709766008 42.493 0.10487 42.493 42.444 42.549 3.8147E-06 18 8 4 0 0 0 0.021667 1 22633 82.261 77.059 1 1.395 1.4471 0 10388000 4399500 5988900 25980 1009 9822 10091 40651 40651 NFYQEHPDLAR 11 0 1 Unmodified _NFYQEHPDLAR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRX8;J3QR02;C1IK54;X6RLV5 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8365 2 695.330933 1388.64731 73213.59 1.0048 0.00069866 -0.20207 -0.0001405 0.80272 0.00055816 695.330902674458 700.335064074581 41.533 0.4873 41.533 41.345 41.833 0 139 40 5 0 0 0 4.3775E-05 3 22411 99.568 95.102 1 1.4707 1.6077 0 35867000 13856000 22011000 25981 1009 9822 10091 40652;40653;40654 40654 NFYQEHPDLAR 11 0 1 Unmodified _NFYQEHPDLAR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRX8;J3QR02;C1IK54;X6RLV5 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2257 3 463.889714 1388.64731 88459.86 0.52294 0.00024259 -0.23999 -0.00011133 0.28295 0.00013126 463.889590402523 467.225731852014 41.522 0.67217 41.522 41.333 42.005 0 258 58 6 0 0 0 0.0064928 3 22246 40.154 40.154 1 1.378 1.5085 0 32884000 13492000 19392000 25982 1009 9822 10091 40655;40656;40657 40655 NFYQEHPDLAR 11 0 1 Unmodified _NFYQEHPDLAR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRX8;J3QR02;C1IK54;X6RLV5 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 467.2263 3 463.889714 1388.64731 88822.13 0.17511 8.1231E-05 -0.40154 -0.00018627 -0.22643 -0.00010504 463.889401733087 467.225627236542 49.502 0.63182 49.502 49.218 49.85 0 250 52 6 0 0 0 0.011529 1 24144 38.238 38.238 1 1.1444 0.97872 0 5884800 2982700 2902100 25983 1009 9822 10091 40658 40658 NFYQEHPDLAR 11 0 1 Unmodified _NFYQEHPDLAR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRX8;J3QR02;C1IK54;X6RLV5 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 695.3315 2 695.330933 1388.64731 75345.82 0.37619 0.00026157 0.90136 0.00062675 1.2775 0.00088832 695.331018553761 700.336153525295 49.465 0.46653 49.465 49.286 49.753 0 167 38 6 0 0 0 0.010303 1 24186 51.276 51.276 1 0.99631 0.8518 0 2763900 1480300 1283600 25984 1009 9822 10091 40659 40659 NFYQEHPDLAR 11 0 1 Unmodified _NFYQEHPDLAR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRX8;J3QR02;C1IK54;X6RLV5 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.2257 3 463.889714 1388.64731 88925.36 -0.097566 -4.526E-05 -0.030683 -1.4233E-05 -0.12825 -5.9493E-05 463.88956912526 467.225718782436 49.716 0.67696 49.716 49.458 50.135 0 271 52 7 0 0 0 0.017252 1 23799 31.348 31.348 1 1.1408 0.9465 0 5294800 2350900 2943900 25985 1009 9822 10091 40660 40660 NFYVEHPEVAR 11 0 1 Unmodified _NFYVEHPEVAR_ 0 0 0 Q59F66;Q92841;B4DZQ7 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.8365 2 680.835851 1359.65715 74014.27 0.72049 0.00049054 0.30462 0.0002074 1.0251 0.00069794 680.835741669525 685.840158857276 47.287 0.52836 47.287 47.051 47.579 0 191 48 7 0 0 0 0.0017197 1 25619 65.347 65.347 1 1.5981 1.7108 0 45530000 17151000 28379000 25986 1801 9823 10092 40661 40661 NFYVEHPEVAR 11 0 1 Unmodified _NFYVEHPEVAR_ 0 0 0 Q59F66;Q92841;B4DZQ7 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.8417 2 680.835851 1359.65715 NaN NaN NaN -0.43467 -0.00029594 NaN NaN NaN NaN 45.641 0.36301 45.641 45.426 45.789 -3.8147E-06 0 0 0 4.7522E-05 1 24994 99.53 73.016 1 NaN NaN 0 28730000 0 28730000 25987 1801 9823 10092 40662 40662 NFYVEHPEVAR 11 0 1 Unmodified _NFYVEHPEVAR_ 0 0 0 Q59F66;Q92841;B4DZQ7 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.8365 2 680.835851 1359.65715 73098.25 0.65361 0.000445 0.23393 0.00015927 0.88755 0.00060427 680.83553973231 685.840009927628 54.301 0.64605 54.301 54.101 54.747 0 152 47 5 0 0 0 0.0021173 1 27037 62.303 62.303 1 0.81949 0.68575 0 3904800 2104600 1800200 25988 1801 9823 10092 40663 40663 NFYVEVPELAK 11 1 0 Unmodified _NFYVEVPELAK_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.8546 2 654.845353 1307.67615 76680.58 0.76094 0.0004983 0.28134 0.00018424 1.0423 0.00068254 654.845313939706 658.852664770414 105.58 0.52628 105.58 105.34 105.86 0 182 39 6 0 0 0 0.020777 2 65284 53.751 53.751 1 1.1079 1.1323 0 13144000 5727200 7417000 25989 511 9824 10093 40664;40665 40664 NFYVEVPELAK 11 1 0 Unmodified _NFYVEVPELAK_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8461 2 654.845353 1307.67615 76460 0.84345 0.00055233 0.23879 0.00015637 1.0822 0.0007087 654.845332294372 658.85255352039 104.87 0.61686 104.87 104.56 105.18 0 206 49 7 0 0 0 0.0083203 2 66522 60.518 60.518 1 1.2149 1.2127 0 14997000 6539000 8457800 25990 511 9824 10093 40666;40667 40667 NFYVEVPELAK 11 1 0 Unmodified _NFYVEVPELAK_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 654.8448 2 654.845353 1307.67615 75292.62 0.58253 0.00038147 -0.90716 -0.00059405 -0.32463 -0.00021258 654.844952959768 658.851131503967 117.11 0.51532 117.11 116.84 117.35 0 81 19 6 0 0 0 0.038479 1 68900 43.308 39.009 1 0.97902 0.77429 0 4153300 2328700 1824600 25991 511 9824 10093 40668 40668 NFYVEVPELAK 11 1 0 Unmodified _NFYVEVPELAK_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.8445 2 654.845353 1307.67615 76126.62 0.71287 0.00046682 -0.9094 -0.00059551 -0.19652 -0.00012869 654.845135449788 658.851360320495 116.85 0.5489 116.85 116.62 117.17 0 81 24 5 0 0 0 0.0062767 2 67861 63.283 52.76 1 0.85649 0.67836 0 3168900 1668600 1500300 25992 511 9824 10093 40669;40670 40670 NGDTLPLSK 9 1 0 Unmodified _NGDTLPLSK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 476.7627 2 472.756007 943.497461 88400.02 0.42477 0.00020081 -0.28686 -0.00013562 0.1379 6.5194E-05 472.755884572455 476.762939160485 45.59 0.70074 45.59 45.293 45.993 0 143 44 5 0 0 0 0.029695 1 21318 46.158 29.382 1 1.2444 0.96592 0 2168100 974410 1193700 25993 1955 9825 10094 40671 40671 NGEDYICPNCTILQVQDETHSETADQQEAK 30 1 0 Unmodified _NGEDYICPNCTILQVQDETHSETADQQEAK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1168.5145 3 1165.17546 3492.50456 57963.78 -0.063454 -7.3935E-05 -0.19701 -0.00022955 -0.26046 -0.00030348 1165.84484629244 1168.51510924389 102.62 0.3956 102.62 102.42 102.82 0 72 27 6 0 0 0 0.047123 1 58247 9.5444 9.5444 1 1.7335 1.3724 0 4183000 1270100 2913000 25994 2002 9826 10095 40672 40672 NGEWYEVLK 9 1 0 Unmodified _NGEWYEVLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.2892 2 569.282389 1136.55022 79565.77 0.43084 0.00024527 -0.053046 -3.0198E-05 0.37779 0.00021507 569.282246233667 573.289117390358 88.499 0.46498 88.499 88.378 88.843 7.6294E-06 124 37 5 0 0 0 4.7173E-05 2 53318 111.95 111.95 1 0.84643 0.83505 0 24958000 14114000 10844000 25995 897 9827 10096 40673;40674 40673 NGEWYEVLK 9 1 0 Unmodified _NGEWYEVLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.2829 2 569.282389 1136.55022 81388.1 0.63085 0.00035913 0.49304 0.00028068 1.1239 0.00063982 569.282195313697 573.29014513989 87.436 0.40562 87.436 87.256 87.662 0 100 32 4 0 0 0 0.00042467 2 53858 99.442 99.442 1 0.84332 0.86737 0 17971000 9758200 8212700 25996 897 9827 10096 40675;40676 40676 NGGHFVISIK 10 1 0 Unmodified _NGGHFVISIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.308 2 536.300916 1070.58728 80674.88 0.77665 0.00041652 -0.31385 -0.00016832 0.46279 0.0002482 536.300712455168 540.307709719328 56.111 0.887 56.111 55.778 56.665 0 358 73 9 0 0 0 4.4105E-08 2 31528 117.02 97.236 1 0.87753 0.98917 0 128180000 61636000 66540000 25997 1506 9828 10097 40677;40678 40678 NGGHFVISIK 10 1 0 Unmodified _NGGHFVISIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.8697 3 357.869703 1070.58728 100240.9 0.33379 0.00011945 -0.18278 -6.5412E-05 0.15101 5.4042E-05 357.869601557267 360.540983387573 56.171 0.54157 56.171 55.931 56.472 -3.8147E-06 238 45 8 0 0 0 0.022551 1 31563 26.786 12.12 1 0.74773 0.8369 0 64068000 37439000 26630000 25998 1506 9828 10097 40679 40679 NGGHFVISIK 10 1 0 Unmodified _NGGHFVISIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.3008 2 536.300916 1070.58728 81470.38 0.63382 0.00033992 -0.14259 -7.6472E-05 0.49123 0.00026344 536.30081124105 540.307872542657 54.411 0.74416 54.411 53.984 54.728 0 301 64 6 0 0 0 8.5663E-17 2 30927 161.17 113.33 1 0.77912 0.88051 0 130760000 77076000 53688000 25999 1506 9828 10097 40680;40681 40681 NGGHFVISIK 10 1 0 Unmodified _NGGHFVISIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 357.8696 3 357.869703 1070.58728 100524 0.34059 0.00012189 -0.16793 -6.0098E-05 0.17265 6.1787E-05 357.869635010436 360.540979070437 54.37 0.74425 54.37 53.962 54.706 3.8147E-06 265 64 7 0 0 0 0.039008 1 30903 20.788 11.431 1 0.76901 0.86728 0 62395000 39637000 22758000 26000 1506 9828 10097 40682 40682 NGGHFVISIK 10 1 0 Unmodified _NGGHFVISIK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.3011 2 536.300916 1070.58728 82983.29 0.45743 0.00024532 -0.10121 -5.4277E-05 0.35622 0.00019104 536.300852194064 540.307878696765 64.547 1.5104 64.547 64.188 65.698 0 354 111 6 0 0 0 4.0753E-08 2 33184 117.7 96.398 1 0.94232 0.77109 0 34962000 18162000 16800000 26001 1506 9828 10097 40683;40684 40683 NGIDILVGTPGR 12 0 1 Unmodified _NGIDILVGTPGR_ 0 0 0 Q9NR30;B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q53FI9 Q9NR30;B4DW97 Q9NR30 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3448 2 606.340769 1210.66699 77623.35 0.61406 0.00037233 0.22203 0.00013463 0.83609 0.00050696 606.340578395554 611.344853937625 89.804 1.2466 89.804 89.261 90.507 0 393 107 5 0 0 0 4.6772E-06 1 55453 110.53 104.43 1 1.0922 1.268 0 64274000 30389000 33885000 26002 2065;416 9829 10098 40685 40685 NGIDILVGTPGR 12 0 1 Unmodified _NGIDILVGTPGR_ 0 0 0 Q9NR30;B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q53FI9 Q9NR30;B4DW97 Q9NR30 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.3456 2 606.340769 1210.66699 77999.55 0.49209 0.00029837 0.45955 0.00027865 0.95164 0.00057702 606.34066873731 611.344905074107 103.59 1.005 103.59 103.05 104.06 0 279 64 7 0 0 0 1.6583E-08 1 58892 121.61 113.03 1 1.1663 0.97209 0 22659000 11724000 10936000 26003 2065;416 9829 10098 40686 40686 NGIDILVGTPGR 12 0 1 Unmodified _NGIDILVGTPGR_ 0 0 0 Q9NR30;B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q53FI9 Q9NR30;B4DW97 Q9NR30 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.3453 2 606.340769 1210.66699 77050.3 0.30421 0.00018446 0.67331 0.00040826 0.97752 0.00059271 606.340786511782 611.344994352657 103.38 1.0105 103.38 102.85 103.86 7.6294E-06 284 67 6 0 0 0 1.9369E-05 1 57791 103.69 97.388 1 1.0529 0.8717 0 14897000 7208200 7688600 26004 2065;416 9829 10098 40687 40687 NGIGIHEHASIDLPGIK 17 1 0 Unmodified _NGIGIHEHASIDLPGIK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.9943 3 590.988087 1769.94243 78903.23 0.48962 0.00028936 0.22975 0.00013578 0.71937 0.00042514 590.988399329104 593.659672377104 90.339 0.62269 90.339 90.093 90.715 0 216 41 8 0 0 0 2.4807E-05 2 49987 47.204 47.204 1 1.0711 0.84635 0 10625000 5473400 5151800 26005 1770 9830 10099 40688;40689 40689 NGIGIHEHASIDLPGIK 17 1 0 Unmodified _NGIGIHEHASIDLPGIK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.6602 3 590.988087 1769.94243 78986.96 0.3536 0.00020897 0.050621 2.9916E-05 0.40422 0.00023889 590.988241220449 593.659565764155 89.818 0.50601 89.818 89.575 90.081 -7.6294E-06 173 32 9 0 0 0 0.00045538 1 48842 38.824 38.824 1 1.1811 0.96707 0 8557200 3710200 4847000 26006 1770 9830 10099 40690 40690 NGKPITSEDIK 11 2 0 Unmodified _NGKPITSEDIK_ 0 0 1 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;B4E162 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 401.2187 3 401.218949 1200.63502 94284.69 0.010023 4.0214E-06 -0.38985 -0.00015642 -0.37983 -0.00015239 401.218710120527 406.561545383007 15.867 0.38467 15.867 15.728 16.113 0 81 21 8 0 0 0 0.012407 1 3399 40.496 13.015 1 1.4616 1.7339 0 26919000 10955000 15963000 26007 61 9831 10100 40691 40691 NGLACLACGPQLEVVNSITGER 22 0 1 Unmodified _NGLACLACGPQLEVVNSITGER_ 0 0 0 Q8WYP5;Q96M44;C9J5C5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1184.5857 2 1179.58066 2357.14676 55710.72 0.0063853 7.5319E-06 0.43449 0.00051252 0.44087 0.00052005 1179.58156187868 1184.58490837007 117.51 0.27301 117.51 117.38 117.65 0 37 15 4 0 0 0 0.0021496 1 77123 44.807 44.807 1 1.1523 1.1613 0 10594000 4887300 5706500 26008 1945 9832 10101 40692 40692 NGLACLACGPQLEVVNSITGER 22 0 1 Unmodified _NGLACLACGPQLEVVNSITGER_ 0 0 0 Q8WYP5;Q96M44;C9J5C5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1185.087 2 1179.58066 2357.14676 55192.46 0.57772 0.00068146 -0.26082 -0.00030766 0.3169 0.00037381 1179.58052457562 1184.58557501507 130.08 0.43596 130.08 129.86 130.3 0 48 16 4 0 0 0 3.4502E-07 1 77864 79.317 79.317 1 2.5102 2.0464 0 12719000 3635700 9082900 26009 1945 9832 10101 40693 40693 NGLLFTYGVTGSGK 14 1 0 Unmodified _NGLLFTYGVTGSGK_ 0 0 0 H7BYN4;Q02241;H0YME6 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3737 2 707.372266 1412.72998 72966.98 0.83531 0.00059088 0.87408 0.0006183 1.7094 0.0012092 707.373035884065 711.380024953496 95.8 0.66412 95.8 95.364 96.028 0 169 54 6 0 0 0 9.9732E-05 1 58180 85.288 76.334 1 0.89741 0.89742 0 18810000 7411100 11399000 26010 1312 9833 10102 40694 40694 NGLSLAALK 9 1 0 Unmodified _NGLSLAALK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.7713 2 443.77146 885.528367 88969.96 0.048199 2.1389E-05 -0.094502 -4.1937E-05 -0.046303 -2.0548E-05 443.771400307267 447.778402696683 76.55 2.1243 76.55 75.986 78.111 7.6294E-06 934 174 8 0 0 0 0.001665 5 45342 82.452 65.857 1 0.60194 0.71425 0 509280000 321210000 188070000 26011 1489 9834 10103 40695;40696;40697;40698;40699 40698 NGLSLAALK 9 1 0 Unmodified _NGLSLAALK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.9987 1 886.535643 885.528367 65026.3 0.56891 0.00050436 0.08578 7.6047E-05 0.65469 0.00058041 886.53560030113 894.549810468566 76.497 1.9146 76.497 76.032 77.947 7.6294E-06 613 157 7 0 0 0 0.010755 1 45432 67.464 33.913 1 0.62446 0.70897 0 161270000 99439000 61828000 26012 1489 9834 10103 40700 40700 NGLSLAALK 9 1 0 Unmodified _NGLSLAALK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.7716 2 443.77146 885.528367 89552.24 -0.015879 -7.0468E-06 -0.042319 -1.878E-05 -0.058198 -2.5827E-05 443.77138705238 447.778465550842 75.135 2.484 75.135 74.67 77.154 0 1088 214 7 0 0 0 0.001665 5 45520 82.452 67.013 1 0.60052 0.70769 0 601320000 365740000 235580000 26013 1489 9834 10103 40701;40702;40703;40704;40705 40703 NGLSLAALK 9 1 0 Unmodified _NGLSLAALK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.9603 1 886.535643 885.528367 64419.09 0.38961 0.0003454 0.23808 0.00021106 0.62769 0.00055647 886.535719206378 894.549902728794 75.257 1.6479 75.257 74.712 76.359 -7.6294E-06 751 148 6 0 0 0 0.051049 1 46037 55.531 26.192 1 0.59531 0.68655 0 185960000 116050000 69909000 26014 1489 9834 10103 40706 40706 NGLSLAALK 9 1 0 Unmodified _NGLSLAALK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 443.7712 2 443.77146 885.528367 89675.23 0.051938 2.3049E-05 -0.19111 -8.481E-05 -0.13917 -6.1762E-05 443.771366132179 447.778331697005 87.932 1.8018 87.932 87.429 89.231 0 565 113 9 0 0 0 0.0017538 3 48718 81.296 65.857 1 0.47099 0.4024 0 66733000 45518000 21215000 26015 1489 9834 10103 40707;40708;40709 40709 NGLSLAALK 9 1 0 Unmodified _NGLSLAALK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.771 2 443.77146 885.528367 89403.38 0.074399 3.3016E-05 -0.27401 -0.0001216 -0.19961 -8.858E-05 443.771324562269 447.778310654789 87.801 1.7549 87.801 87.341 89.096 0 513 104 8 0 0 0 0.008633 2 47325 60.91 52.57 1 0.48812 0.41495 0 77062000 51909000 25153000 26016 1489 9834 10103 40710;40711 40710 NGLSLAALKK 10 2 0 Unmodified _NGLSLAALKK_ 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.8335 2 507.818941 1013.62333 86399.64 0.11357 5.7673E-05 0.27577 0.00014004 0.38934 0.00019771 507.818886335703 515.8332811403 52.236 0.47651 52.236 52.052 52.529 0 98 35 4 0 0 0 0.026841 1 29010 48.423 36.655 1 0.79907 0.95136 0 17673000 9595600 8077400 26017 1489 9835 10104 40712 40712 NGLSLAALKK 10 2 0 Unmodified _NGLSLAALKK_ 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.8336 2 507.818941 1013.62333 86161.07 0.45879 0.00023298 -0.10646 -5.4062E-05 0.35233 0.00017892 507.818868666011 515.833026036262 50.556 0.33796 50.556 50.455 50.793 0 78 29 4 0 0 0 0.012952 1 28559 57.032 50.861 1 0.73847 0.84298 0 13253000 7632700 5620300 26018 1489 9835 10104 40713 40713 NGLSLAALKK 10 2 0 Unmodified _NGLSLAALKK_ 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.8331 2 507.818941 1013.62333 84455.64 0.27581 0.00014006 -0.021677 -1.1008E-05 0.25413 0.00012905 507.818858550214 515.833042513376 60.135 0.53136 60.135 59.869 60.4 0 161 35 7 0 0 0 0.00063668 2 30690 88.177 80.237 1 0.54201 0.46206 0 20655000 13516000 7139100 26019 1489 9835 10104 40714;40715 40714 NGLSLAALKK 10 2 0 Unmodified _NGLSLAALKK_ 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.8185 2 507.818941 1013.62333 85306.51 0.27401 0.00013915 -0.075011 -3.8092E-05 0.199 0.00010105 507.81883851107 515.833034306898 60.346 0.64539 60.346 60.093 60.738 0 194 48 6 0 0 0 5.5686E-08 2 30172 119.21 119.21 1 0.50932 0.43182 0 19637000 12793000 6843500 26020 1489 9835 10104 40716;40717 40717 NGPLEEDGERYDEDEEAAK 19 1 1 Unmodified _NGPLEEDGERYDEDEEAAK_ 0 0 1 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.9763 3 722.641698 2164.90327 71157.04 0.78648 0.00056834 -0.21772 -0.00015734 0.56875 0.00041101 722.641598975739 728.648826547855 39.176 0.70965 39.176 38.908 39.618 0 262 57 8 0 0 0 5.4682E-06 2 20187 71.263 69.965 1 0.4166 0.49869 0 56309000 40987000 15322000 26021 1479 9836 10105 40718;40719 40718 NGPLEEDGERYDEDEEAAK 19 1 1 Unmodified _NGPLEEDGERYDEDEEAAK_ 0 0 1 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.984 3 722.641698 2164.90327 71378.73 0.45875 0.00033151 0.14491 0.00010472 0.60366 0.00043623 722.641709416431 728.649041586977 38.252 0.50665 38.252 38.017 38.524 0 224 40 8 0 0 0 5.7916E-06 1 20036 70.413 70.413 1 0.36743 0.43152 0 60810000 45487000 15322000 26022 1479 9836 10105 40720 40720 NGPLEEDGERYDEDEEAAK 19 1 1 Unmodified _NGPLEEDGERYDEDEEAAK_ 0 0 1 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.9767 3 722.641698 2164.90327 71809.41 0.54496 0.00039381 0.020579 1.4871E-05 0.56554 0.00040868 722.975969699838 728.649199525267 46.109 0.93275 46.109 45.806 46.739 0 440 63 11 0 0 0 0.011768 1 22083 23.172 22.642 1 0.49523 0.43318 0 25766000 17431000 8334900 26023 1479 9836 10105 40721 40721 NGPLEEDGERYDEDEEAAK 19 1 1 Unmodified _NGPLEEDGERYDEDEEAAK_ 0 0 1 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.9766 3 722.641698 2164.90327 71098.64 0.3554 0.00025682 -0.0084739 -6.1236E-06 0.34692 0.0002507 722.975981443017 728.649169545557 46.536 0.89652 46.536 46.216 47.113 0 311 56 10 0 0 0 0.00013384 2 21812 44.382 44.382 1 0.49299 0.41811 0 18633000 12771000 5861800 26024 1479 9836 10105 40722;40723 40722 NGPLEVAGAAVSAGHGLPAK 20 1 0 Unmodified _NGPLEVAGAAVSAGHGLPAK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 908.9911 2 908.489224 1814.9639 63426.77 0.66228 0.00060168 0.090437 8.2161E-05 0.75272 0.00068384 908.990713400092 912.496438899004 79.703 1.0022 79.703 79.404 80.406 0 653 86 10 0 0 0 9.3875E-13 4 47682 134.37 134.37 1 1.1729 1.3957 0 611000000 285990000 325020000 26025 1401 9837 10106 40724;40725;40726;40727 40727 NGPLEVAGAAVSAGHGLPAK 20 1 0 Unmodified _NGPLEVAGAAVSAGHGLPAK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.6668 3 605.995242 1814.9639 77106.49 0.72806 0.0004412 -0.054734 -3.3169E-05 0.67332 0.00040803 606.329599863965 608.666690231591 79.704 1.7522 79.704 79.35 81.102 0 1044 150 11 0 0 0 3.3037E-13 5 47158 102.45 102.45 1 1.0742 1.2889 0 1043200000 493520000 549700000 26026 1401 9837 10106 40728;40729;40730;40731;40732 40729 NGPLEVAGAAVSAGHGLPAK 20 1 0 Unmodified _NGPLEVAGAAVSAGHGLPAK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.3293 3 605.995242 1814.9639 77083.82 0.42682 0.00025865 -0.087085 -5.2773E-05 0.33973 0.00020588 606.329619936364 608.666701687659 78.621 1.6268 78.621 78.157 79.784 0 1038 138 12 0 0 0 3.2859E-18 4 47496 119.87 119.87 1 1.0748 1.272 0 2128300000 1041500000 1086700000 26027 1401 9837 10106 40733;40734;40735;40736 40734 NGPLEVAGAAVSAGHGLPAK 20 1 0 Unmodified _NGPLEVAGAAVSAGHGLPAK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 912.9987 2 908.489224 1814.9639 63460.79 0.47772 0.00043401 -0.10163 -9.2329E-05 0.37609 0.00034168 908.489123663521 912.496273901286 78.621 1.0503 78.621 78.195 79.246 0 439 90 7 0 0 0 2.2325E-31 3 47487 196.18 196.18 1 1.0964 1.2945 0 1032200000 521640000 510550000 26028 1401 9837 10106 40737;40738;40739 40737 NGPLEVAGAAVSAGHGLPAK 20 1 0 Unmodified _NGPLEVAGAAVSAGHGLPAK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 908.4898 2 908.489224 1814.9639 NaN NaN NaN 0.064909 5.8969E-05 NaN NaN NaN NaN 78.537 0.84424 78.537 78.206 79.05 0 0 0 0 1.1776E-24 1 47440 159.22 148.66 1 NaN NaN 0 254070000 254070000 0 26029 1401 9837 10106 40740 40740 NGPLEVAGAAVSAGHGLPAK 20 1 0 Unmodified _NGPLEVAGAAVSAGHGLPAK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 609.0014 3 605.995242 1814.9639 76773.53 0.65302 0.00039573 -0.15032 -9.1095E-05 0.5027 0.00030463 606.329640834623 608.666693441182 91.488 2.4418 91.488 91.046 93.488 0 1014 153 12 0 0 0 2.6329E-05 4 50644 44.788 44.788 1 1.1842 1.0494 0 327000000 151890000 175110000 26030 1401 9837 10106 40741;40742;40743;40744 40742 NGPLEVAGAAVSAGHGLPAK 20 1 0 Unmodified _NGPLEVAGAAVSAGHGLPAK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 908.4896 2 908.489224 1814.9639 63944.61 0.59034 0.00053632 -0.131 -0.00011901 0.45934 0.00041731 908.990623256413 912.496198260321 91.473 1.6022 91.473 91.093 92.696 0 793 99 13 0 0 0 4.5418E-06 3 50646 82.578 82.578 1 1.1467 1.0049 0 201310000 92233000 109080000 26031 1401 9837 10106 40745;40746;40747 40745 NGPLEVAGAAVSAGHGLPAK 20 1 0 Unmodified _NGPLEVAGAAVSAGHGLPAK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 908.9905 2 908.489224 1814.9639 63401.55 0.35657 0.00032394 -0.11086 -0.00010072 0.24571 0.00022323 908.489366814939 912.496197446176 91.172 1.892 91.172 90.787 92.679 0 801 113 12 0 0 0 1.2199E-12 4 49656 134.02 134.02 1 1.2692 1.0924 0 170690000 74333000 96358000 26032 1401 9837 10106 40748;40749;40750;40751 40749 NGPLEVAGAAVSAGHGLPAK 20 1 0 Unmodified _NGPLEVAGAAVSAGHGLPAK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.0012 3 605.995242 1814.9639 76816.65 0.47738 0.00028929 -0.14433 -8.7464E-05 0.33305 0.00020183 605.995736063518 608.666702880743 91.215 2.1615 91.215 90.787 92.949 0 983 132 13 0 0 0 2.0092E-09 4 49648 91.637 91.637 1 1.1952 1.0355 0 259280000 120420000 138850000 26033 1401 9837 10106 40752;40753;40754;40755 40753 NGQDLGVAFK 10 1 0 Unmodified _NGQDLGVAFK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5;Q5RI18 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.775 2 524.774731 1047.53491 83333.51 0.44372 0.00023286 0.07225 3.7915E-05 0.51598 0.00027077 524.774797397701 528.781796123231 57.747 0.8845 57.747 57.429 58.314 0 358 70 7 0 0 0 1.621E-09 2 32574 131.06 97.799 1 1.1778 1.3257 0 118750000 55200000 63548000 26034 999 9838 10107 40756;40757 40756 NGQDLGVAFK 10 1 0 Unmodified _NGQDLGVAFK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5;Q5RI18 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.7819 2 524.774731 1047.53491 83573.78 0.3722 0.00019532 0.24702 0.00012963 0.61922 0.00032495 524.775339109643 528.781716243978 66.615 1.2532 66.615 65.88 67.133 0 292 77 7 0 0 0 0.0088235 2 34631 55.549 34.086 1 0.71383 0.57064 0 8945600 5032800 3912800 26035 999 9838 10107 40758;40759 40758 NGQVIGIGAGQQSR 14 0 1 Unmodified _NGQVIGIGAGQQSR_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06;H7C1S2 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.8721 2 692.868214 1383.72187 NaN NaN NaN 0.20061 0.00013899 NaN NaN NaN NaN 42.032 0.35882 42.032 41.893 42.252 0 0 0 0 0.00041083 1 22274 79.659 69.427 1 NaN NaN 0 9622900 0 9622900 26036 852 9839 10108 40760 40760 NGSFGVLVATNVAAR 15 0 1 Unmodified _NGSFGVLVATNVAAR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.407 2 738.401889 1474.78923 71452.66 0.86125 0.00063595 0.14164 0.00010458 1.0029 0.00074053 738.401995108412 743.406028756662 92.889 0.91321 92.889 92.416 93.329 0 399 81 7 0 0 0 0.00022097 1 56071 65.234 65.234 1 1.2935 1.3848 0 45545000 22393000 23152000 26037 2065 9840 10109 40761 40761 NGSFGVLVATNVAAR 15 0 1 Unmodified _NGSFGVLVATNVAAR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.4033 2 738.401889 1474.78923 70844.84 0.97652 0.00072107 0.26998 0.00019935 1.2465 0.00092042 738.402092238136 743.405911031974 91.94 1.1619 91.94 91.314 92.476 0 409 100 6 0 0 0 1.6187E-05 2 56858 88.338 88.338 1 1.241 1.4349 0 56422000 24934000 31487000 26038 2065 9840 10109 40762;40763 40763 NGSFGVLVATNVAAR 15 0 1 Unmodified _NGSFGVLVATNVAAR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.4059 2 738.401889 1474.78923 70761.91 0.75988 0.0005611 -0.064614 -4.7711E-05 0.69527 0.00051339 738.401843956823 743.405929090598 106.21 1.1044 106.21 105.6 106.71 0 256 59 9 0 0 0 0.0023181 2 60489 45.257 45.257 1 1.2977 1.0885 0 25722000 11093000 14629000 26039 2065 9840 10109 40764;40765 40764 NGSFGVLVATNVAAR 15 0 1 Unmodified _NGSFGVLVATNVAAR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.4025 2 738.401889 1474.78923 70267.37 0.74128 0.00054737 -0.025095 -1.853E-05 0.71619 0.00052884 738.401710568027 743.405954922815 105.94 0.97852 105.94 105.42 106.4 -7.6294E-06 313 61 8 0 0 0 0.00073119 2 59444 51.218 51.218 1 1.2463 1.0702 0 21438000 9827000 11611000 26040 2065 9840 10109 40766;40767 40766 NGTGVLILSPTR 12 0 1 Unmodified _NGTGVLILSPTR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3625 2 614.356419 1226.69829 75922.7 0.72422 0.00044493 0.1708 0.00010493 0.89502 0.00054986 614.356449245353 619.360532768759 82.403 0.96986 82.403 81.847 82.816 0 390 81 7 0 0 0 5.9197E-09 3 49079 154.66 132.02 1 1.0053 1.1538 0 137700000 77327000 60369000 26041 303 9841 10110 40768;40769;40770 40769 NGTGVLILSPTR 12 0 1 Unmodified _NGTGVLILSPTR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.361 2 614.356419 1226.69829 75933.8 0.53464 0.00032846 0.045222 2.7783E-05 0.57986 0.00035624 614.356410291037 619.360445949852 81.201 0.8531 81.201 80.771 81.624 0 341 71 7 0 0 0 3.792E-08 2 49588 139.32 111.31 1 0.98759 1.1241 0 111350000 59125000 52229000 26042 303 9841 10110 40771;40772 40772 NGTGVLILSPTR 12 0 1 Unmodified _NGTGVLILSPTR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.3567 2 614.356419 1226.69829 76378.41 0.4801 0.00029496 0.1364 8.3797E-05 0.6165 0.00037875 614.356481417989 619.360589216156 93.674 1.1103 93.674 93.297 94.408 0 342 72 8 0 0 0 0.0024834 1 52251 58.476 40.165 1 1.4836 1.2448 0 25879000 10263000 15616000 26043 303 9841 10110 40773 40773 NGTLILSPVDIK 12 1 0 Unmodified _NGTLILSPVDIK_ 0 0 0 Q8NDD1;Q5TBI2 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.3823 2 635.374278 1268.734 78581.7 0.80305 0.00051024 -0.027754 -1.7634E-05 0.77529 0.0004926 635.374098107113 639.381219394638 103.21 0.45265 103.21 103.05 103.5 0 90 38 4 0 0 0 0.00021532 1 63650 81.865 74.218 1 1.308 1.2956 0 8268200 3567200 4701000 26044 1925 9842 10111 40774 40774 NGTLILSPVDIK 12 1 0 Unmodified _NGTLILSPVDIK_ 0 0 0 Q8NDD1;Q5TBI2 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.3821 2 635.374278 1268.734 78290.83 1.0432 0.00066284 -0.63022 -0.00040043 0.41301 0.00026241 635.373743061522 639.380961261455 102.44 0.35281 102.44 102.28 102.63 0 78 27 4 0 0 0 0.0017153 2 64718 60.434 51.97 1 1.1116 1.1213 0 7835200 3472900 4362400 26045 1925 9842 10111 40775;40776 40775 NGTLILSPVDIK 12 1 0 Unmodified _NGTLILSPVDIK_ 0 0 0 Q8NDD1;Q5TBI2 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.3817 2 635.374278 1268.734 78997.84 0.72019 0.00045759 0.69505 0.00044162 1.4152 0.00089921 635.875598687601 639.381300467241 115.14 0.42275 115.14 114.95 115.37 0 57 20 5 0 0 0 0.040528 1 66481 34.193 34.193 1 1.1163 0.96868 0 1350900 593300 757590 26046 1925 9842 10111 40777 40777 NGTLSVSDTTVGSK 14 1 0 Unmodified _NGTLSVSDTTVGSK_ 0 0 0 Q9BSC4 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3538 2 683.346446 1364.67834 74269.34 0.69287 0.00047347 -0.25329 -0.00017308 0.43959 0.00030039 683.346367158156 687.353604703226 42.497 0.50325 42.497 42.327 42.83 0 191 40 6 0 0 0 8.8581E-07 2 22573 110.08 103.77 1 1.1407 1.2335 0 42896000 19258000 23638000 26047 2000 9843 10112 40778;40779 40778 NGTLSVSDTTVGSK 14 1 0 Unmodified _NGTLSVSDTTVGSK_ 0 0 0 Q9BSC4 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.3534 2 683.346446 1364.67834 73360.28 0.45695 0.00031226 0.064878 4.4334E-05 0.52183 0.00035659 683.346300063452 687.353576944461 49.514 0.61742 49.514 49.232 49.85 -3.8147E-06 246 51 6 0 0 0 0.032797 2 24087 30.336 30.336 1 1.7669 1.4142 0 7203700 2525500 4678300 26048 2000 9843 10112 40780;40781 40780 NGTLSVSDTTVGSK 14 1 0 Unmodified _NGTLSVSDTTVGSK_ 0 0 0 Q9BSC4 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.3538 2 683.346446 1364.67834 72773.3 0.28182 0.00019258 0.12237 8.3622E-05 0.40419 0.00027621 683.346291938551 687.353624703151 49.904 0.65249 49.904 49.577 50.229 0 252 53 7 0 0 0 0.0029376 1 23741 47.991 47.991 1 1.7185 1.4031 0 8022300 3061700 4960500 26049 2000 9843 10112 40782 40782 NGTQVHGTITGVDVSMNTHLK 21 1 0 Oxidation (M) _NGTQVHGTITGVDVSM(ox)NTHLK_ NGTQVHGTITGVDVSM(1)NTHLK NGTQVHGTITGVDVSM(82.63)NTHLK 0 1 0 P62314;Q7Z5A3 P62314 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.706 3 742.37082 2224.09063 72143.12 0.90078 0.00066871 0.01046 7.7651E-06 0.91124 0.00067648 742.70545418352 745.042153295895 46.65 0.27772 46.65 46.524 46.802 0 103 23 7 0 0 0 2.8697E-09 2 25811 82.635 78.284 1 1.6739 1.707 0 17116000 5936100 11180000 26050 1644 9844 10113 40783;40784 40784 1424 NGVALTALDQDHVAVLGSPLAASK 24 1 0 Unmodified _NGVALTALDQDHVAVLGSPLAASK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.426 3 783.092051 2346.25432 70447.25 1.1535 0.00090333 0.28303 0.00022164 1.4366 0.001125 783.092071251296 785.763705704363 108.52 0.354 108.52 108.31 108.66 0 113 27 5 0 0 0 1.4178E-12 2 67836 73.036 73.036 1 0.73548 0.76325 0 14816000 7504100 7311800 26051 2042 9845 10114 40785;40786 40785 NGVALTALDQDHVAVLGSPLAASK 24 1 0 Unmodified _NGVALTALDQDHVAVLGSPLAASK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.4332 3 783.092051 2346.25432 70574.58 0.85572 0.00067011 0.2702 0.00021159 1.1259 0.0008817 783.426787980228 786.432985460816 107.88 0.57214 107.88 107.55 108.12 0 150 42 6 0 0 0 0.027861 2 68863 15.765 15.765 1 1.1654 1.1646 0 15236000 8722700 6512900 26052 2042 9845 10114 40787;40788 40787 NGVMPSHFSR 10 0 1 Oxidation (M) _NGVM(ox)PSHFSR_ NGVM(1)PSHFSR NGVM(107.21)PSHFSR 0 1 0 B0ZBD0;Q8WVX7;P39019;A0A075B6E2 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.2736 2 574.26929 1146.52403 NaN NaN NaN 0.15976 9.1747E-05 NaN NaN NaN NaN 19.951 0.40837 19.951 19.768 20.176 0 0 0 0 4.3051E-08 1 6466 107.21 97.218 1 NaN NaN 0 23022000 0 23022000 26053 811 9846 10115 40789 40789 648 NGVMPSHFSR 10 0 1 Oxidation (M) _NGVM(ox)PSHFSR_ NGVM(1)PSHFSR NGVM(47.84)PSHFSR 0 1 0 B0ZBD0;Q8WVX7;P39019;A0A075B6E2 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 383.1817 3 383.181952 1146.52403 96482.27 -0.35675 -0.0001367 -0.14724 -5.6418E-05 -0.50398 -0.00019312 383.181828539591 386.517931900168 19.74 0.31531 19.74 19.597 19.913 0 57 13 7 0 0 0 0.0044247 1 6096 47.844 33.637 1 1.2976 1.4357 0 42148000 17639000 24509000 26054 811 9846 10115 40790 40790 648 NGWMEQISGK 10 1 0 Oxidation (M) _NGWM(ox)EQISGK_ NGWM(1)EQISGK NGWM(57.55)EQISGK 0 1 0 Q5SSJ5;B4E0N8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.2715 2 583.268955 1164.52336 84334.75 0.50644 0.00029539 0.17538 0.0001023 0.68183 0.00039769 583.269179751007 587.276300866134 40.752 0.56858 40.752 40.447 41.016 0 150 49 5 0 0 0 0.0035622 2 21261 57.55 53.39 1 0.7153 0.72622 0 13586000 6911200 6674500 26055 1817 9847 10116 40791;40792 40792 1676 NGWMEQISGK 10 1 0 Oxidation (M) _NGWM(ox)EQISGK_ NGWM(1)EQISGK NGWM(53.75)EQISGK 0 1 0 Q5SSJ5;B4E0N8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.2761 2 583.268955 1164.52336 81086.87 0.85063 0.00049615 -0.041963 -2.4476E-05 0.80867 0.00047167 583.268891653529 587.275978600247 39.596 0.53593 39.596 39.389 39.925 0 131 45 4 0 0 0 0.0049155 1 20944 53.751 53.751 1 0.76052 0.82136 0 22587000 14602000 7984500 26056 1817 9847 10116 40793 40793 1676 NGYGFVEFEDSR 12 0 1 Unmodified _NGYGFVEFEDSR_ 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3;B5BU15 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6;SFRS6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.3143 2 710.312406 1418.61026 73322.63 0.71822 0.00051016 0.26049 0.00018503 0.97871 0.00069519 710.312643091743 715.316773699394 84.216 0.80814 84.216 83.823 84.631 0 280 67 6 0 0 0 0.0020652 1 51496 59.542 55.243 1 1.2049 1.3044 0 27311000 13585000 13726000 26057 748 9848 10117 40794 40794 NGYGFVEFEDSR 12 0 1 Unmodified _NGYGFVEFEDSR_ 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3;B5BU15 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6;SFRS6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.3138 2 710.312406 1418.61026 73624.17 0.42456 0.00030157 0.53294 0.00037855 0.9575 0.00068012 710.312635306795 715.316806870196 97.175 0.39234 97.175 96.954 97.347 0 77 19 6 0 0 0 0.0027346 1 53878 57.836 53.537 1 0.91693 0.78638 0 2828300 1623300 1205000 26058 748 9848 10117 40795 40795 NHCVPPYSESK 11 1 0 Unmodified _NHCVPPYSESK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.3062 2 659.298244 1316.58194 77576.53 0.6181 0.00040751 -0.032199 -2.1229E-05 0.5859 0.00038628 659.298165933385 663.305309175276 19.782 0.6372 19.782 19.471 20.108 0 113 35 5 0 0 0 2.3522E-05 2 6157 103.55 103.55 1 0.97599 0.977 0 7676600 3929900 3746700 26059 1813 9849 10118 40796;40797 40796 NHCVPPYSESK 11 1 0 Unmodified _NHCVPPYSESK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.3064 2 659.298244 1316.58194 74318.27 0.29001 0.0001912 0.2816 0.00018566 0.57161 0.00037686 659.800075035159 663.305491039566 19.372 0.65058 19.372 19.11 19.76 0 113 27 5 0 0 0 1.4269E-05 2 5746 107.15 107.15 1 0.88625 0.92435 0 10997000 6141400 4855400 26060 1813 9849 10118 40798;40799 40799 NHCVPPYSESK 11 1 0 Unmodified _NHCVPPYSESK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.3057 2 659.298244 1316.58194 75432.75 0.19001 0.00012528 0.44887 0.00029594 0.63888 0.00042121 659.298470660414 663.305680065886 20.933 0.77259 20.933 20.341 21.113 -1.9073E-06 211 52 6 0 0 0 0.032634 1 6020 37.556 37.556 1 1.6036 1.2558 0 3874100 1495300 2378800 26061 1813 9849 10118 40800 40800 NHDEESLECLCR 12 0 1 Unmodified _NHDEESLECLCR_ 0 0 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;B4DZE1;B4DH17;A0A0A0MSA7;A0A0U1RQK7;Q59GJ0;O43432 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.3264 2 781.322122 1560.62969 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.152 1 39.152 38.652 39.652 0 0 0 0 0.0055954 1 20691 63.32 57.026 1 26062 896 9850 10119 40801 40801 NHDTAISSHTVK 12 1 0 Unmodified _NHDTAISSHTVK_ 0 0 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.3375 2 655.32839 1308.64223 77791.45 1.0024 0.00065693 -0.031205 -2.045E-05 0.97123 0.00063648 655.328133149837 659.335656479418 16.493 0.24244 16.493 16.361 16.604 0 26 11 4 0 0 0 0.00087998 1 3837 64.439 57.543 1 0.89551 0.97942 0 3287300 1684300 1603100 26063 1928 9851 10120 40802 40802 NHDTAISSHTVK 12 1 0 Unmodified _NHDTAISSHTVK_ 0 0 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.3354 2 655.32839 1308.64223 75756.91 0.27243 0.00017853 -0.068531 -4.4911E-05 0.2039 0.00013362 655.328412542551 659.335449170247 15.334 0.20246 15.334 15.278 15.48 0 36 8 6 0 0 0 2.1874E-05 2 3011 102.52 95.933 1 0.60795 0.6707 0 2790900 1552600 1238200 26064 1928 9851 10120 40803;40804 40804 NHEEEISTLR 10 0 1 Unmodified _NHEEEISTLR_ 0 0 0 B4DE59;K7EMS3 B4DE59 B4DE59 KRT19 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8036 2 614.301841 1226.58913 NaN NaN NaN -0.22878 -0.00014054 NaN NaN NaN NaN 27.024 0.2591 27.024 26.926 27.185 0 0 0 0 0.0025671 1 12349 79.974 69.987 1 NaN NaN 0 5228600 5228600 0 26065 964 9852 10121 40805 40805 NHEEEISTLR 10 0 1 Unmodified _NHEEEISTLR_ 0 0 0 B4DE59;K7EMS3 B4DE59 B4DE59 KRT19 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.3024 2 614.301841 1226.58913 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.336 1 26.336 25.836 26.836 0 0 0 0 6.9913E-05 1 11776 82.749 67.599 1 26066 964 9852 10121 40806 40806 NHEEEMNALR 10 0 1 Oxidation (M) _NHEEEM(ox)NALR_ NHEEEM(1)NALR NHEEEM(47.82)NALR 0 1 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__Q04695;Q04695;F5GWP8;Q14666;K7EPJ9;K7ESE1 CON__P02533;CON__Q04695 CON__P02533 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.7776 2 629.777676 1257.5408 NaN NaN NaN -0.62376 -0.00039283 NaN NaN NaN NaN 16.37 0.29071 16.37 16.202 16.493 0 0 0 0 0.014323 1 3694 47.823 43.372 1 NaN NaN 0 1790400 1790400 0 + 26067 1150;1168 9853 10122 40807 40807 857 NHEEEMNALR 10 0 1 Unmodified _NHEEEMNALR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__Q04695;Q04695;F5GWP8;Q14666;K7EPJ9;K7ESE1 CON__P02533;CON__Q04695 CON__P02533 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.7806 2 621.780219 1241.54588 NaN NaN NaN -0.14732 -9.1599E-05 NaN NaN NaN NaN 26.585 0.40061 26.585 26.421 26.822 0 0 0 0 0.013317 1 10049 59.908 48.06 1 NaN NaN 0 2533700 2533700 0 + 26068 1150;1168 9853 10123 40808 40808 NHEEEMNALR 10 0 1 Unmodified _NHEEEMNALR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__Q04695;Q04695;F5GWP8;Q14666;K7EPJ9;K7ESE1 CON__P02533;CON__Q04695 CON__P02533 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.7807 2 621.780219 1241.54588 NaN NaN NaN 0.20829 0.00012951 NaN NaN NaN NaN 26.465 0.4132 26.465 26.28 26.694 -1.9073E-06 0 0 0 4.6773E-05 1 9465 101.46 62.668 1 NaN NaN 0 2994000 2994000 0 + 26069 1150;1168 9853 10123 40809 40809 NHEIVPGSLIASIASLK 17 1 0 Unmodified _NHEIVPGSLIASIASLK_ 0 0 0 Q9BVS4 Q9BVS4 Q9BVS4 RIOK2 Serine/threonine-protein kinase RIO2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.3402 3 583.668355 1747.98323 88161.66 0.6182 0.00036082 0.38676 0.00022574 1.005 0.00058656 584.002731336587 586.674535338307 130.24 0.28131 130.24 130.11 130.39 0 29 12 4 0 0 0 0.034631 1 78941 17.895 17.895 1 1.3186 1.1655 0 891210 469430 421790 26070 2010 9854 10124 40810 40810 NHELSGLNK 9 1 0 Unmodified _NHELSGLNK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.2717 2 506.26453 1010.51451 86110.36 0.32388 0.00016397 -0.50417 -0.00025524 -0.18029 -9.1272E-05 506.264358712139 510.271414292688 20.051 0.3982 20.051 19.807 20.205 0 31 11 4 0 0 0 1.711E-06 1 6544 136.21 108.33 1 1.5749 1.6087 0 28264000 11948000 16316000 26071 1873 9855 10125 40811 40811 NHELSGLNK 9 1 0 Unmodified _NHELSGLNK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.2649 2 506.26453 1010.51451 85563.78 -0.040489 -2.0498E-05 0.22412 0.00011347 0.18364 9.2968E-05 506.264557031997 510.271739167285 21.249 0.17564 21.249 21.15 21.325 -1.9073E-06 35 8 6 0 0 0 0.0011684 1 6341 89.029 62.336 1 1.1687 0.9261 0 4830900 2374200 2456700 26072 1873 9855 10125 40812 40812 NHFAEIETELQAELVR 16 0 1 Unmodified _NHFAEIETELQAELVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.4933 2 949.983972 1897.95339 63423.03 1.1803 0.0011213 0.70863 0.00067319 1.8889 0.0017944 949.983656630292 955.48933494928 111.54 0.45399 111.54 111.36 111.82 0 75 32 6 0 0 0 0.02027 1 70268 38.021 38.021 1 0.82821 0.8563 0 13870000 8343300 5526500 26073 1803 9856 10126 40813 40813 NHFAEIETELQAELVR 16 0 1 Unmodified _NHFAEIETELQAELVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.9938 3 633.658407 1897.95339 NaN NaN NaN -0.24574 -0.00015571 NaN NaN NaN NaN 111.71 1.2182 111.71 111.14 112.35 0 0 0 0 9.5523E-19 2 70092 91.616 87.556 1 NaN NaN 0 18313000 18313000 0 26074 1803 9856 10126 40814;40815 40814 NHFAEIETELQAELVR 16 0 1 Unmodified _NHFAEIETELQAELVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.9944 3 633.658407 1897.95339 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.47 1 111.47 110.97 111.97 0 0 0 0 8.816E-07 1 70181 96.773 85.511 1 26075 1803 9856 10126 40816 40816 NHFAEIETELQAELVR 16 0 1 Unmodified _NHFAEIETELQAELVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.9948 3 633.658407 1897.95339 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.24 1 112.24 111.74 112.74 0 0 0 0 0.0080541 1 70829 54.768 43.713 1 26076 1803 9856 10126 40817 40817 NHFAEIETELQAELVR 16 0 1 Unmodified _NHFAEIETELQAELVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.6575 3 633.658407 1897.95339 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.32 1 112.32 111.82 112.82 0 0 0 0 0.0026577 1 70897 52.569 47.36 1 26077 1803 9856 10126 40818 40818 NHFAEIETELQAELVR 16 0 1 Unmodified _NHFAEIETELQAELVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.9941 3 633.658407 1897.95339 76199.65 0.68809 0.00043601 -0.12641 -8.0101E-05 0.56168 0.00035591 633.992656014077 637.328975986003 110.45 1.4949 110.45 109.84 111.33 7.6294E-06 475 105 8 0 0 0 3.8078E-09 3 71068 89.484 89.484 1 0.87628 0.9594 0 32618000 15715000 16903000 26078 1803 9856 10126 40819;40820;40821 40819 NHFAEIETELQAELVR 16 0 1 Unmodified _NHFAEIETELQAELVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.984 2 949.983972 1897.95339 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.19 1 110.19 109.69 110.69 0 0 0 0 0.00099116 1 70898 67.456 44.736 1 26079 1803 9856 10126 40822 40822 NHFAEIETELQAELVR 16 0 1 Unmodified _NHFAEIETELQAELVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.3308 3 633.658407 1897.95339 75352.41 0.75338 0.00047739 0.25557 0.00016195 1.009 0.00063933 633.992840908713 637.329177525157 121.09 0.84621 121.09 120.66 121.51 0 134 39 7 0 0 0 1.3067E-25 2 71987 147.64 147.64 1 1.4945 1.2587 0 27914000 10422000 17492000 26080 1803 9856 10126 40823;40824 40823 NHFAEIETELQAELVR 16 0 1 Unmodified _NHFAEIETELQAELVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 955.4913 2 949.983972 1897.95339 60159.63 0.70016 0.00066514 0.39382 0.00037412 1.094 0.0010393 949.982616757689 955.490854447229 121.09 0.39419 121.09 120.91 121.31 0 62 17 5 0 0 0 4.0857E-05 2 72017 107.99 102.92 1 1.4147 1.2162 0 6649100 2864400 3784700 26081 1803 9856 10126 40825;40826 40825 NHFAEIETELQAELVR 16 0 1 Unmodified _NHFAEIETELQAELVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 954.9879 2 949.983972 1897.95339 62084.79 0.59912 0.00056916 -0.22418 -0.00021297 0.37495 0.00035619 949.983492923615 954.987954477589 120.86 0.47073 120.86 120.61 121.08 -7.6294E-06 63 20 5 0 0 0 2.7701E-06 2 70904 113.76 113.76 1 1.3689 1.1395 0 7173000 2578100 4595000 26082 1803 9856 10126 40827;40828 40827 NHFAEIETELQAELVR 16 0 1 Unmodified _NHFAEIETELQAELVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.9944 3 633.658407 1897.95339 75739.8 0.78689 0.00049862 -0.32967 -0.0002089 0.45721 0.00028972 633.992528693378 636.994398064366 120.89 0.56219 120.89 120.63 121.19 0 83 24 4 0 0 0 1.1338E-25 1 70914 148.03 148.03 1 1.5251 1.2857 0 17622000 9883500 7738800 26083 1803 9856 10126 40829 40829 NHLETLSR 8 0 1 Unmodified _NHLETLSR_ 0 0 0 Q99549 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 490.2635 2 485.259248 968.503943 87571.01 -0.12278 -5.9581E-05 0.15711 7.6241E-05 0.034333 1.666E-05 485.259317907885 490.263431742007 22.134 0.42548 22.134 21.987 22.413 -1.9073E-06 53 15 6 0 0 0 0.013893 1 7009 64.265 44.628 1 1.4248 1.1996 0 4575000 1762500 2812500 26084 1994 9857 10127 40830 40830 NHLETLSR 8 0 1 Unmodified _NHLETLSR_ 0 0 0 Q99549 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 490.2632 2 485.259248 968.503943 86420.78 -0.098992 -4.8037E-05 -0.29627 -0.00014377 -0.39526 -0.0001918 485.259138749265 490.263277048618 21.891 0.35256 21.891 21.748 22.101 1.9073E-06 46 11 6 0 0 0 0.013762 1 6392 64.567 39.935 1 1.6186 1.3878 0 3335900 1170600 2165200 26085 1994 9857 10127 40831 40831 NHMWIFVNALIENPTFDSQTK 21 1 0 Oxidation (M) _NHM(ox)WIFVNALIENPTFDSQTK_ NHM(1)WIFVNALIENPTFDSQTK NHM(89.86)WIFVNALIENPTFDSQTK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.4119 3 841.077525 2520.21074 67099.3 0.87092 0.00073251 -0.47682 -0.00040104 0.3941 0.00033146 841.411085042737 844.083267871471 119.73 1.1219 119.73 119.16 120.28 0 435 76 10 0 0 0 1.6861E-11 3 76930 89.859 89.859 1 0.96178 0.94197 0 22054000 10884000 11170000 26086 1471 9858 10128 40832;40833;40834 40833 1208 NHMWIFVNALIENPTFDSQTK 21 1 0 Oxidation (M) _NHM(ox)WIFVNALIENPTFDSQTK_ NHM(1)WIFVNALIENPTFDSQTK NHM(82.61)WIFVNALIENPTFDSQTK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 841.4113 3 841.077525 2520.21074 66122.27 0.7615 0.00064048 -0.30401 -0.00025569 0.45749 0.00038479 841.411198385485 844.083480671076 118.89 0.9759 118.89 118.44 119.42 0 414 63 9 0 0 0 2.8849E-09 2 78118 82.609 82.609 1 0.93626 1.0099 0 38123000 21599000 16524000 26087 1471 9858 10128 40835;40836 40836 1208 NHMWIFVNALIENPTFDSQTK 21 1 0 Oxidation (M) _NHM(ox)WIFVNALIENPTFDSQTK_ NHM(1)WIFVNALIENPTFDSQTK NHM(90.97)WIFVNALIENPTFDSQTK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 844.0846 3 841.077525 2520.21074 66123.01 0.61807 0.00051984 0.020741 1.7445E-05 0.63881 0.00053729 841.412032696548 844.083299908371 130.39 0.89262 130.39 130.11 131 0 356 41 12 0 0 0 1.5028E-11 2 79004 90.968 90.968 1 0.7816 0.63608 0 30795000 17692000 13103000 26088 1471 9858 10128 40837;40838 40838 1208 NHMWIFVNALIENPTFDSQTK 21 1 0 Oxidation (M) _NHM(ox)WIFVNALIENPTFDSQTK_ NHM(1)WIFVNALIENPTFDSQTK NHM(50.92)WIFVNALIENPTFDSQTK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 843.749 3 841.077525 2520.21074 65919.33 1.0066 0.00084667 -0.24482 -0.00020592 0.76182 0.00064075 841.411844834369 844.083222592181 130.12 0.88971 130.12 129.83 130.72 0 278 35 11 0 0 0 3.2847E-07 1 77898 50.916 50.916 1 0.76306 0.62852 0 29041000 17126000 11915000 26089 1471 9858 10128 40839 40839 1208 NHMWIFVNALIENPTFDSQTK 21 1 0 Unmodified _NHMWIFVNALIENPTFDSQTK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.9207 3 835.745886 2504.21583 64343.34 0.72449 0.00060549 0.0026936 2.2512E-06 0.72719 0.00060774 836.08013632531 838.751810039792 134.55 0.28983 134.55 134.37 134.66 0 39 10 7 0 0 0 0.0060577 1 82190 33.304 27.599 1 1.3798 1.1289 0 34863000 16699000 18164000 26090 1471 9858 10129 40840 40840 NHPLYALK 8 1 0 Unmodified _NHPLYALK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPJ1;D2CPJ3;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.2787 2 478.271627 954.528701 89815.3 0.30993 0.00014823 0.59205 0.00028316 0.90198 0.00043139 478.272069779338 482.278530568883 32.329 0.80807 32.329 31.966 32.775 0 180 73 5 0 0 0 0.009492 1 16061 74.415 62.766 1 1.109 1.0865 0 21593000 8482500 13110000 26091 118;1184 9859 10130 40841 40841 NHPLYALK 8 1 0 Unmodified _NHPLYALK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPJ1;D2CPJ3;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.2713 2 478.271627 954.528701 88934.8 0.11753 5.621E-05 0.018171 8.6908E-06 0.1357 6.4901E-05 478.271576807283 482.278613540283 31.282 0.56742 31.282 31.157 31.724 1.9073E-06 145 51 5 0 0 0 0.010603 1 15445 71.852 50.588 1 0.67207 0.73879 0 42157000 26163000 15994000 26092 118;1184 9859 10130 40842 40842 NHPLYALK 8 1 0 Unmodified _NHPLYALK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPJ1;D2CPJ3;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.2716 2 478.271627 954.528701 89123.43 -0.047016 -2.2486E-05 -0.031308 -1.4974E-05 -0.078324 -3.746E-05 478.271731124209 482.278564925433 35.979 0.6882 35.979 35.765 36.454 0 220 57 6 0 0 0 0.060397 1 16038 39.957 18.186 1 1.0672 0.84565 0 4838000 2429100 2409000 26093 118;1184 9859 10130 40843 40843 NHPLYALK 8 1 0 Unmodified _NHPLYALK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPJ1;D2CPJ3;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.2716 2 478.271627 954.528701 89979.7 0.38101 0.00018222 -0.27926 -0.00013356 0.10175 4.8662E-05 478.271495982355 482.278531838295 35.667 0.628 35.667 35.431 36.059 0 164 52 6 0 0 0 0.031174 2 15374 51.456 31.733 1 0.99104 0.79618 0 4227300 2082000 2145300 26094 118;1184 9859 10130 40844;40845 40845 NHTLALTETGSVFAFGENK 19 1 0 Unmodified _NHTLALTETGSVFAFGENK_ 0 0 0 A5PLK7;A0A024RAC5;Q9P258 A5PLK7 A5PLK7 RCC2 Protein RCC2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.0128 3 679.340966 2035.00107 76262.14 0.82615 0.00056124 -0.74646 -0.0005071 0.07969 5.4137E-05 679.675082524153 682.012044767694 111.05 0.39111 111.05 110.91 111.3 0 64 16 6 0 0 0 0.0027676 1 64284 27.376 23.656 1 0.60734 0.49184 0 2745900 1921600 824370 26095 301 9860 10131 40846 40846 NHTLALTETGSVFAFGENK 19 1 0 Unmodified _NHTLALTETGSVFAFGENK_ 0 0 0 A5PLK7;A0A024RAC5;Q9P258 A5PLK7 A5PLK7 RCC2 Protein RCC2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.0129 3 679.340966 2035.00107 76576.87 0.73992 0.00050266 0.33046 0.00022449 1.0704 0.00072715 679.675560522273 682.347365488096 110.82 0.44595 110.82 110.58 111.03 0 83 22 6 0 0 0 0.013947 2 63189 21.569 21.47 1 0.64592 0.51218 0 2004900 1268300 736620 26096 301 9860 10131 40847;40848 40848 NHVCQYYIYELQK 13 1 0 Unmodified _NHVCQYYIYELQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.424 2 879.419422 1756.82429 NaN NaN NaN -0.32312 -0.00028415 NaN NaN NaN NaN 70.135 0.14369 70.135 70.092 70.235 7.6294E-06 0 0 0 0.0039328 1 40826 63.32 51.454 1 NaN NaN 0 3337500 0 3337500 26097 2070 9861 10132 40849 40849 NHVCQYYIYELQK 13 1 0 Unmodified _NHVCQYYIYELQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 879.4196 2 879.419422 1756.82429 65920.7 0.50161 0.00044112 -0.33859 -0.00029776 0.16302 0.00014337 879.419065585426 883.425884022329 68.098 0.40372 68.098 67.854 68.258 0 107 34 6 0 0 0 0.00016029 2 40321 87.568 80.87 1 0.65618 0.67771 0 9690200 4719300 4970900 26098 2070 9861 10132 40850;40851 40851 NHVCQYYIYELQK 13 1 0 Unmodified _NHVCQYYIYELQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 883.4265 2 879.419422 1756.82429 64691.55 0.44785 0.00039385 -0.19135 -0.00016828 0.2565 0.00022558 879.419278169656 883.426426083644 79.432 0.98332 79.432 79.216 80.199 0 281 59 8 0 0 0 2.1826E-24 2 42759 161.99 153.03 1 1.7264 1.352 0 16555000 5713600 10842000 26099 2070 9861 10132 40852;40853 40853 NHVCQYYIYELQK 13 1 0 Unmodified _NHVCQYYIYELQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.2876 3 586.615373 1756.82429 78468.99 0.4696 0.00027547 0.67332 0.00039498 1.1429 0.00067045 587.28425022516 589.28735843982 79.403 0.92647 79.403 79.149 80.075 0 266 56 9 0 0 0 0.00097447 2 42820 36.39 35.245 1 1.6087 1.2685 0 17735000 6501500 11234000 26100 2070 9861 10132 40854;40855 40855 NIANTLMAK 9 1 0 Oxidation (M) _NIANTLM(ox)AK_ NIANTLM(1)AK NIANTLM(44.38)AK 0 1 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.2657 2 496.265684 990.516816 87429.65 0.13469 6.6843E-05 0.06987 3.4674E-05 0.20456 0.00010152 496.265599357746 500.272835826447 36.798 0.50005 36.798 36.472 36.972 0 96 36 4 0 0 0 0.016543 1 18921 44.377 27.601 1 1.1761 1.174 0 14900000 7070700 7829400 26101 1418 9862 10133 40856 40856 1109 NICFTVWDVGGQDR 14 0 1 Unmodified _NICFTVWDVGGQDR_ 0 0 0 P18085;C9JPM4;C9JAK5 P18085 P18085 ARF4 ADP-ribosylation factor 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.7349 2 833.885746 1665.75694 70574.65 0.91866 0.00076606 -0.65963 -0.00055005 0.25903 0.00021601 833.885654220592 838.889337238526 109.05 0.44523 109.05 108.84 109.29 0 94 32 6 0 0 0 0.0088554 1 69795 37.995 34.322 1 2.0088 2.0306 0 9800300 3889100 5911200 26102 1498 9863 10134 40857 40857 NICFTVWDVGGQDR 14 0 1 Unmodified _NICFTVWDVGGQDR_ 0 0 0 P18085;C9JPM4;C9JAK5 P18085 P18085 ARF4 ADP-ribosylation factor 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 838.8904 2 833.885746 1665.75694 65926.16 0.45821 0.00038209 0.084482 7.0448E-05 0.54269 0.00045254 833.886000813516 838.890424973204 120.48 0.36276 120.48 120.32 120.68 0 59 16 5 0 0 0 0.050483 1 71474 25.342 25.342 1 1.1914 1.0098 0 2925300 1351200 1574100 26103 1498 9863 10134 40858 40858 NICFTVWDVGGQDR 14 0 1 Unmodified _NICFTVWDVGGQDR_ 0 0 0 P18085;C9JPM4;C9JAK5 P18085 P18085 ARF4 ADP-ribosylation factor 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.8904 2 833.885746 1665.75694 65575.82 0.88305 0.00073636 -0.87231 -0.0007274 0.010746 8.9608E-06 833.884326990292 838.890203938045 120.23 0.34 120.23 120.08 120.42 7.6294E-06 42 17 4 0 0 0 0.029789 1 70445 31.185 31.185 1 1.2549 1.1283 0 2255300 1015700 1239600 26104 1498 9863 10134 40859 40859 NIDAGEMVIEYAGNVIR 17 0 1 Oxidation (M) _NIDAGEM(ox)VIEYAGNVIR_ NIDAGEM(1)VIEYAGNVIR NIDAGEM(58.67)VIEYAGNVIR 0 1 0 Q03164;B4DIJ7 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180;Histone-lysine N-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.4694 2 940.464558 1878.91456 NaN NaN NaN 0.28672 0.00026965 NaN NaN NaN NaN 113.62 0.35829 113.62 113.4 113.76 0 0 0 0 0.00043425 1 71903 58.674 41.732 1 NaN NaN 0 3994000 0 3994000 26105 1680 9864 10135 40860 40860 1492 NIDAGEMVIEYAGNVIR 17 0 1 Oxidation (M) _NIDAGEM(ox)VIEYAGNVIR_ NIDAGEM(1)VIEYAGNVIR NIDAGEM(53.97)VIEYAGNVIR 0 1 0 Q03164;B4DIJ7 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180;Histone-lysine N-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.4706 2 940.464558 1878.91456 NaN NaN NaN -0.93238 -0.00087687 NaN NaN NaN NaN 113.02 0.32191 113.02 112.9 113.22 0 0 0 0 0.00083994 2 73237 53.967 45.798 1 NaN NaN 0 3358200 0 3358200 26106 1680 9864 10135 40861;40862 40861 1492 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.3705 3 758.036605 2271.08799 68408.2 0.79976 0.00060624 -0.058149 -4.4079E-05 0.74161 0.00056217 758.370889763693 764.708862772979 65.756 0.8147 65.756 65.36 66.175 0 497 75 9 0 0 0 5.5573E-08 3 37745 65.855 56.798 1 0.84432 0.91873 0 62261000 32904000 29357000 26107 93 9865 10136 40863;40864;40865 40864 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.03 4 568.779273 2271.08799 78374.27 0.76059 0.00043261 -0.0011037 -6.2775E-07 0.75948 0.00043198 569.277622364144 573.785123707892 65.848 1.6456 65.848 64.668 66.314 0 594 148 9 0 0 0 0.012397 1 37794 20.606 16.42 1 0.83399 0.90859 0 93196000 49600000 43596000 26108 93 9865 10136 40866 40866 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.0432 3 758.036605 2271.08799 69055.69 0.53182 0.00040314 0.32117 0.00024346 0.85298 0.00064659 758.371576959852 765.043361687851 63.788 1.5356 63.788 62.975 64.511 -3.8147E-06 612 136 9 0 0 0 2.6824E-07 1 37405 57.989 49.34 1 0.6554 0.76149 0 85808000 50410000 35399000 26109 93 9865 10136 40867 40867 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.6323 4 568.779273 2271.08799 79253.5 0.57824 0.00032889 -0.45158 -0.00025685 0.12666 7.2039E-05 569.030112810226 573.784302390113 63.724 1.4745 63.724 63.096 64.571 3.8147E-06 729 131 10 0 0 0 0.043374 1 37520 11.622 7.6706 1 0.85956 1.0005 0 91915000 51826000 40088000 26110 93 9865 10136 40868 40868 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 758.3713 3 758.036605 2271.08799 69386.42 0.72167 0.00054705 0.1182 8.9598E-05 0.83986 0.00063665 758.37135217521 765.043172916787 74.501 1.241 74.501 73.93 75.171 -7.6294E-06 434 86 10 0 0 0 1.3112E-08 2 39501 75.358 56.903 1 0.69501 0.57497 0 22205000 12418000 9787400 26111 93 9865 10136 40869;40870 40869 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 758.3712 3 758.036605 2271.08799 69504.55 0.53371 0.00040457 0.010093 7.6512E-06 0.5438 0.00041222 758.371285255073 764.708618108674 74.723 1 74.723 74.41 75.41 7.6294E-06 356 63 11 0 0 0 6.5704E-08 2 38915 63.69 53.042 1 0.63415 0.58687 0 20610000 12287000 8323200 26112 93 9865 10136 40871;40872 40872 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.0301 4 568.779273 2271.08799 78773.98 0.38814 0.00022077 0.59097 0.00033613 0.97911 0.0005569 569.029993946864 573.784615826592 74.739 1.4941 74.739 74.338 75.832 0 366 99 7 0 0 0 0.042175 1 38857 10.838 7.5994 1 0.93341 0.86682 0 25844000 14444000 11400000 26113 93 9865 10136 40873 40873 NIDEHANEDVER 12 0 1 Unmodified _NIDEHANEDVER_ 0 0 0 P61026;Q53T70 P61026 P61026 RAB10 Ras-related protein Rab-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.219 3 480.883176 1439.6277 87328.98 -0.0026868 -1.292E-06 -0.20079 -9.6554E-05 -0.20347 -9.7846E-05 480.883003161548 484.219162701716 20.096 0.27235 20.096 19.933 20.205 0 27 7 6 0 0 0 0.0044439 1 6608 43.594 39.028 1 1.8996 1.9658 0 13812000 3713900 10099000 26114 1627 9866 10137 40874 40874 NIDEHANEDVER 12 0 1 Unmodified _NIDEHANEDVER_ 0 0 0 P61026;Q53T70 P61026 P61026 RAB10 Ras-related protein Rab-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.8213 2 720.821126 1439.6277 71583.69 0.58648 0.00042275 -0.12264 -8.8399E-05 0.46384 0.00033435 720.820837374283 725.82516152746 19.964 0.29892 19.964 19.865 20.164 0 46 11 7 0 0 0 1.6489E-05 1 6312 105.03 99.718 1 1.8099 1.9297 0 24556000 9229000 15327000 26115 1627 9866 10137 40875 40875 NIDEHANEDVER 12 0 1 Unmodified _NIDEHANEDVER_ 0 0 0 P61026;Q53T70 P61026 P61026 RAB10 Ras-related protein Rab-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.8224 2 720.821126 1439.6277 72789.48 0.28172 0.00020307 0.10975 7.9109E-05 0.39147 0.00028218 720.821669286907 725.825064793974 21.952 0.30192 21.952 21.83 22.132 0 37 9 6 0 0 0 0.057368 1 6432 31.431 28.811 1 1.4718 1.2831 0 1478700 617990 860750 26116 1627 9866 10137 40876 40876 NIEDVIAQGIGK 12 1 0 Unmodified _NIEDVIAQGIGK_ 0 0 0 A0A024RCA7;P05387;H0YDD8 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.8467 2 628.845884 1255.67722 75137.8 0.73502 0.00046221 0.42391 0.00026658 1.1589 0.00072879 628.845790905765 632.8529002474 97.98 1.3474 97.98 97.288 98.636 0 599 105 9 0 0 0 0.00069946 1 59817 67.113 47.798 1 0.92561 1.0683 0 219780000 105480000 114300000 26117 356 9867 10138 40877 40877 NIEDVIAQGIGK 12 1 0 Unmodified _NIEDVIAQGIGK_ 0 0 0 A0A024RCA7;P05387;H0YDD8 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.8535 2 628.845884 1255.67722 76161.76 0.88862 0.00055881 0.011783 7.4098E-06 0.90041 0.00056622 628.845881195953 632.85300726949 97.229 1.3154 97.229 96.548 97.863 0 509 104 9 0 0 0 1.8037E-12 2 60626 126.03 90.082 1 0.81039 0.92729 0 160850000 89124000 71725000 26118 356 9867 10138 40878;40879 40878 NIEDVIAQGIGK 12 1 0 Unmodified _NIEDVIAQGIGK_ 0 0 0 A0A024RCA7;P05387;H0YDD8 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.8463 2 628.845884 1255.67722 76251.77 0.77168 0.00048527 -0.062495 -3.93E-05 0.70919 0.00044597 628.845719879397 632.852791925286 110.89 0.97168 110.89 110.46 111.43 0 196 43 8 0 0 0 0.0001724 2 64073 91.549 62.076 1 0.58422 0.47223 0 22976000 14615000 8361200 26119 356 9867 10138 40880;40881 40881 NIEDVIAQGIGK 12 1 0 Unmodified _NIEDVIAQGIGK_ 0 0 0 A0A024RCA7;P05387;H0YDD8 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.8462 2 628.845884 1255.67722 75575.7 0.71191 0.00044768 0.015274 9.6051E-06 0.72718 0.00045728 628.845854837968 632.852755519295 110.84 0.92937 110.84 110.54 111.47 0 226 45 8 0 0 0 0.00021273 2 63093 81.338 59.874 1 0.55479 0.44587 0 16840000 11117000 5723200 26120 356 9867 10138 40882;40883 40883 NIEDYIHR 8 0 1 Unmodified _NIEDYIHR_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2645 2 530.26453 1058.51451 84474.14 0.68867 0.00036518 -0.17271 -9.1582E-05 0.51596 0.00027359 530.263914377768 535.268807977484 48.826 0.25592 48.826 48.627 48.882 0 63 17 5 0 0 0 0.011877 1 26703 68.915 19.556 1 1.1582 1.1663 0 17471000 8920100 8550600 26121 63 9868 10139 40884 40884 NIEDYIHR 8 0 1 Unmodified _NIEDYIHR_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.2639 2 530.26453 1058.51451 84962.78 0.58034 0.00030773 -0.40701 -0.00021582 0.17333 9.1911E-05 530.263523906987 535.268781022678 47.472 0.35368 47.472 47.305 47.659 0 106 23 6 0 0 0 0.0092293 3 26377 75.213 18.035 1 0.96903 1.065 0 40613000 23077000 17536000 26122 63 9868 10139 40885;40886;40887 40886 NIEEHASADVEK 12 1 0 Unmodified _NIEEHASADVEK_ 0 0 0 A0A024R7I3;P61006 A0A024R7I3 A0A024R7I3 RAB8A Ras-related protein Rab-8A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.3256 2 671.317688 1340.62082 NaN NaN NaN 0.38759 0.00026019 NaN NaN NaN NaN 21.13 0.27873 21.13 20.979 21.258 -1.9073E-06 0 0 0 4.6681E-05 1 7423 95.273 76.962 1 NaN NaN 0 6982700 0 6982700 26123 226 9869 10140 40888 40888 NIEEHASADVEK 12 1 0 Unmodified _NIEEHASADVEK_ 0 0 0 A0A024R7I3;P61006 A0A024R7I3 A0A024R7I3 RAB8A Ras-related protein Rab-8A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3256 2 671.317688 1340.62082 75641.59 0.62616 0.00042035 0.49461 0.00033204 1.1208 0.00075239 671.317929403283 675.325065637849 20.773 0.26217 20.773 20.665 20.927 0 32 8 5 0 0 0 7.0022E-30 2 7047 173.76 156.39 1 1.4795 1.5579 0 19804000 8414600 11389000 26124 226 9869 10140 40889;40890 40889 NIEIDSPYEISR 12 0 1 Unmodified _NIEIDSPYEISR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;B7Z4L4;B4DNJ5 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.3621 2 718.356813 1434.69907 74318.28 0.68881 0.00049481 -0.24639 -0.000177 0.44242 0.00031781 718.858292364066 723.360249281862 83.187 0.50761 83.187 82.883 83.391 0 133 44 5 0 0 0 1.3787E-05 1 49826 106.29 100.98 1 1.1062 1.1229 0 15061000 4730100 10331000 26125 1444 9870 10141 40891 40891 NIEIDSPYEISR 12 0 1 Unmodified _NIEIDSPYEISR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;B7Z4L4;B4DNJ5 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.3615 2 718.356813 1434.69907 73975.16 0.53487 0.00038422 -0.50167 -0.00036038 0.033196 2.3846E-05 718.858246849013 723.360145507606 82.266 0.55689 82.266 81.982 82.538 0 122 49 5 0 0 0 2.2866E-05 1 50359 102.06 70.988 1 0.98068 0.98324 0 17929000 6568800 11360000 26126 1444 9870 10141 40892 40892 NIEMTQEDVR 10 0 1 Oxidation (M) _NIEM(ox)TQEDVR_ NIEM(1)TQEDVR NIEM(122.13)TQEDVR 0 1 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.7916 2 625.787709 1249.56087 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.146 1 24.146 23.646 24.646 0 0 0 0 1.1399E-12 1 9927 122.13 99.064 1 26127 1411 9871 10142 40893 40893 1099 NIEMTQEDVR 10 0 1 Oxidation (M) _NIEM(ox)TQEDVR_ NIEM(1)TQEDVR NIEM(82.64)TQEDVR 0 1 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.7901 2 625.787709 1249.56087 NaN NaN NaN 0.97174 0.0006081 NaN NaN NaN NaN 23.952 0.43145 23.952 23.725 24.156 -1.9073E-06 0 0 0 0.000637 2 9714 82.645 44.833 1 NaN NaN 0 19162000 19162000 0 26128 1411 9871 10142 40894;40895 40895 1099 NIEMTQEDVR 10 0 1 Oxidation (M) _NIEM(ox)TQEDVR_ NIEM(1)TQEDVR NIEM(107.21)TQEDVR 0 1 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.7917 2 625.787709 1249.56087 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.978 1 23.978 23.478 24.478 0 0 0 0 3.4398E-07 1 9783 107.21 81.646 1 26129 1411 9871 10142 40896 40896 1099 NIEMTQEDVR 10 0 1 Oxidation (M) _NIEM(ox)TQEDVR_ NIEM(1)TQEDVR NIEM(82.29)TQEDVR 0 1 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.7883 2 625.787709 1249.56087 75667.24 0.5116 0.00032015 -0.37851 -0.00023687 0.13309 8.3283E-05 625.787712778324 630.791260860592 27.07 0.41485 27.07 26.894 27.309 0 76 21 6 0 0 0 0.00034978 1 10410 82.287 75.067 1 0.71538 0.62121 0 2317400 1240300 1077100 26130 1411 9871 10142 40897 40897 1099 NIEMTQEDVR 10 0 1 Oxidation (M) _NIEM(ox)TQEDVR_ NIEM(1)TQEDVR NIEM(51.45)TQEDVR 0 1 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.7883 2 625.787709 1249.56087 76464.98 0.26522 0.00016597 -0.022393 -1.4013E-05 0.24282 0.00015196 625.78776441397 630.791756988689 27.199 0.43299 27.199 27 27.433 0 62 17 5 0 0 0 0.005737 1 9966 51.445 48.037 1 0.73601 0.66166 0 2010500 1122300 888220 26131 1411 9871 10142 40898 40898 1099 NIFAILQSVK 10 1 0 Unmodified _NIFAILQSVK_ 0 0 0 Q6P1J9;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.8469 2 566.839874 1131.66519 79062.56 0.73958 0.00041923 -0.20527 -0.00011636 0.53431 0.00030287 566.839720516588 570.846790520013 120.27 0.7413 120.27 119.97 120.71 0 222 53 6 0 0 0 0.0011505 2 77363 75.378 29.22 1 1.6611 1.6362 0 24323000 9066200 15257000 26132 1851 9872 10143 40899;40900 40899 NIFAILQSVK 10 1 0 Unmodified _NIFAILQSVK_ 0 0 0 Q6P1J9;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.8471 2 566.839874 1131.66519 80538.82 0.86307 0.00048922 -0.37832 -0.00021445 0.48475 0.00027477 566.839630203702 570.846710699228 119.65 0.73151 119.65 119.37 120.11 0 239 53 7 0 0 0 7.8785E-05 2 78776 98.033 31.412 1 1.7472 1.7905 0 31886000 11658000 20228000 26133 1851 9872 10143 40901;40902 40901 NIFAILQSVK 10 1 0 Unmodified _NIFAILQSVK_ 0 0 0 Q6P1J9;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.8473 2 566.839874 1131.66519 82079.78 0.99446 0.0005637 -0.38763 -0.00021973 0.60682 0.00034397 566.839519067449 570.84680441251 133.07 0.72375 133.07 132.87 133.59 0 108 33 6 0 0 0 0.03614 1 80960 40.331 13.002 1 2.0065 1.6063 0 2887600 779230 2108400 26134 1851 9872 10143 40903 40903 NIFAILQSVK 10 1 0 Unmodified _NIFAILQSVK_ 0 0 0 Q6P1J9;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.847 2 566.839874 1131.66519 80340.95 1.0876 0.00061648 -0.41129 -0.00023314 0.67627 0.00038334 566.839481788316 570.846736444245 132.79 0.42993 132.79 132.59 133.02 -1.5259E-05 68 19 5 0 0 0 0.00050835 1 79851 85.731 39.572 1 1.9704 1.6067 0 4643500 1571500 3072000 26135 1851 9872 10143 40904 40904 NIGLGFK 7 1 0 Unmodified _NIGLGFK_ 0 0 0 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 374.7212 2 374.721239 747.427924 97282.82 0.035297 1.3226E-05 -0.098917 -3.7066E-05 -0.06362 -2.384E-05 374.721169977892 378.728230363461 63.137 2.3364 63.137 62.533 64.869 0 1029 219 8 0 0 0 0.032919 2 36067 64.776 10.251 1 0.8971 1.0372 0 227210000 118440000 108770000 26136 1641 9873 10144 40905;40906 40905 NIGLGFK 7 1 0 Unmodified _NIGLGFK_ 0 0 0 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 374.7209 2 374.721239 747.427924 96413.57 0.18168 6.808E-05 -0.03777 -1.4153E-05 0.14391 5.3927E-05 374.721224557281 378.728225455481 61.694 1.817 61.694 61.189 63.006 0 819 168 8 0 0 0 0.032919 1 36376 64.776 10.251 1 0.88287 1.0393 0 433960000 230720000 203230000 26137 1641 9873 10144 40907 40907 NIGLGFK 7 1 0 Unmodified _NIGLGFK_ 0 0 0 P62280;M0QZC5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 374.7212 2 374.721239 747.427924 97920.34 0.032977 1.2357E-05 -0.16577 -6.2118E-05 -0.13279 -4.9761E-05 374.721118972473 378.72817750957 71.967 1.8947 71.967 71.599 73.493 0 574 141 7 0 0 0 0.044796 1 37942 57.463 8.7029 1 1.0456 0.88139 0 55752000 25277000 30475000 26138 1641 9873 10144 40908 40908 NIGQAIAAAVNAK 13 1 0 Unmodified _NIGQAIAAAVNAK_ 0 0 0 REV__Q8TD57 REV__Q8TD57 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.8535 2 620.854044 1239.69353 NaN NaN NaN 0.1618 0.00010045 NaN NaN NaN NaN 28.942 0.38518 28.942 28.73 29.115 1.9073E-06 0 0 0 0.0043451 1 13803 61.78 25.569 1 NaN NaN 0 13462000 13462000 0 + 26139 2182 9874 10145 40909 40909 NIGVDNPAAK 10 1 0 Unmodified _NIGVDNPAAK_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.7768 2 499.766906 997.519259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.906 1 29.906 29.406 30.406 1.9073E-06 0 0 0 0.0018994 1 14553 68.224 32.343 1 26140 1255 9875 10146 40910 40910 NIGVDNPAAK 10 1 0 Unmodified _NIGVDNPAAK_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371;B7Z4R3 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.7754 2 499.766906 997.519259 NaN NaN NaN 1.3928 0.0006961 NaN NaN NaN NaN 29.523 0.287 29.523 29.395 29.682 0 0 0 0 0.033591 1 14219 51.066 25.329 1 NaN NaN 0 6932900 0 6932900 26141 1255 9875 10146 40911 40911 NIHAAAHQVR 10 0 1 Unmodified _NIHAAAHQVR_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 372.872 3 372.872218 1115.59482 98267.21 -0.4016 -0.00014974 0.035878 1.3378E-05 -0.36572 -0.00013637 372.872231038638 376.208284046369 15.062 0.1583 15.062 14.975 15.133 0 13 3 5 0 0 0 0.001554 1 2848 56.916 46.164 1 1.2404 1.2544 0 9685700 4547600 5138100 26142 2008 9876 10147 40912 40912 NIHAAAHQVR 10 0 1 Unmodified _NIHAAAHQVR_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.8045 2 558.804688 1115.59482 81352.09 0.0032382 1.8095E-06 0.58097 0.00032465 0.58421 0.00032646 558.804982802304 563.809027817021 15.067 0.19768 15.067 14.998 15.196 9.5367E-07 12 4 5 0 0 0 0.0014353 1 2759 73.665 54.686 1 0.86881 0.9416 0 2624400 1350200 1274100 26143 2008 9876 10147 40913 40913 NIHAAAHQVR 10 0 1 Unmodified _NIHAAAHQVR_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 376.2081 3 372.872218 1115.59482 NaN NaN NaN -0.074841 -2.7906E-05 NaN NaN NaN NaN 15.068 0.19768 15.068 14.998 15.196 0 0 0 0 0.00083629 1 2752 79.148 64.004 1 NaN NaN 0 3388700 0 3388700 26144 2008 9876 10147 40914 40914 NIHLNLDR 8 0 1 Unmodified _NIHLNLDR_ 0 0 0 A0A023T787;Q9Y5S9;A0A0J9YW13 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.7817 2 497.775065 993.535577 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.59 1 42.59 42.09 43.09 0 0 0 0 0.03896 1 22669 58.596 9.2375 1 26145 4 9877 10148 40915 40915 NIHPIYNIK 9 1 0 Unmodified _NIHPIYNIK_ 0 0 0 Q13601 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.3165 2 556.316566 1110.61858 81348.79 0.76736 0.0004269 -0.54108 -0.00030101 0.22629 0.00012589 556.316300142586 560.323415494239 46.397 0.7559 46.397 45.991 46.746 0 348 66 8 0 0 0 3.4163E-05 2 24978 133.81 83.181 1 1.0773 1.2155 0 78452000 38436000 40016000 26146 1717 9878 10149 40916;40917 40917 NIHSSDWPK 9 1 0 Unmodified _NIHSSDWPK_ 0 0 0 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;G3V4E7 Q5RLJ0 Q5RLJ0 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.2715 2 542.26453 1082.51451 83537.15 0.3635 0.00019711 -0.14334 -7.7729E-05 0.22016 0.00011939 542.26408565006 546.27178231167 24.451 0.5142 24.451 24.278 24.792 1.9073E-06 77 24 6 0 0 0 0.021253 1 10220 49.536 40.591 1 1.0757 1.1569 0 21558000 10295000 11263000 26147 1793 9879 10150 40918 40918 NIIHGSDSVESAEK 14 1 0 Unmodified _NIIHGSDSVESAEK_ 0 0 0 P15531 P15531 P15531 NME1 Nucleoside diphosphate kinase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.8701 2 743.362627 1484.7107 71058.57 0.50342 0.00037422 0.61964 0.00046062 1.1231 0.00083484 743.363159216221 747.370541533714 26.984 0.2652 26.984 26.835 27.1 -1.9073E-06 42 15 4 0 0 0 0.00061865 1 12238 59.542 32.944 1 1.0437 1.0571 0 6716900 3270600 3446200 26148 1484 9880 10151 40919 40919 NIIHGSDSVESAEK 14 1 0 Unmodified _NIIHGSDSVESAEK_ 0 0 0 P15531 P15531 P15531 NME1 Nucleoside diphosphate kinase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3713 2 743.362627 1484.7107 71131.98 0.50428 0.00037486 0.34249 0.00025459 0.84677 0.00062946 743.3626669304 747.369838528029 26.407 0.27207 26.407 26.252 26.524 0 60 16 5 0 0 0 0.0048477 1 11754 44.765 40.426 1 2.7988 2.9559 0 20054000 6029300 14025000 26149 1484 9880 10151 40920 40920 NIIHGSDSVK 10 1 0 Unmodified _NIIHGSDSVK_ 0 0 0 Q6FHN3;Q32Q12;O60361;P22392 Q6FHN3 Q6FHN3 NME2;NME1-NME2;NME2P1 Nucleoside diphosphate kinase;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2853 2 535.285463 1068.55637 84591.5 0.25764 0.00013791 -0.18597 -9.9547E-05 0.071667 3.8362E-05 535.285430271284 539.292662665005 20.84 0.36784 20.84 20.708 21.075 0 48 16 5 0 0 0 0.0035385 1 7242 64.064 43.505 1 1.2083 1.2616 0 12188000 4927100 7260700 26150 1393 9881 10152 40921 40921 NIILEEGK 8 1 0 Unmodified _NIILEEGK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;E9PS23 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 462.2681 2 458.260925 914.507297 89209.03 0.20153 9.2355E-05 0.1863 8.5372E-05 0.38783 0.00017773 458.260895521427 462.26804957572 46.099 1.011 46.099 45.694 46.705 0 269 88 6 0 0 0 0.022432 1 24747 57.177 19.619 1 10.552 11.796 0 63379000 7426300 55953000 26151 1242 9882 10153 40922 40922 NIILEEGK 8 1 0 Unmodified _NIILEEGK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;E9PS23 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.2676 2 458.260925 914.507297 NaN NaN NaN -0.70414 -0.00032268 NaN NaN NaN NaN 45.25 0.91075 45.25 44.727 45.637 0 0 0 0 0.020224 1 24632 65.252 27.694 1 NaN NaN 0 70864000 0 70864000 26152 1242 9882 10153 40923 40923 NIILEEGK 8 1 0 Unmodified _NIILEEGK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;E9PS23 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 462.2672 2 458.260925 914.507297 NaN NaN NaN -0.95385 -0.00043711 NaN NaN NaN NaN 52.713 0.72547 52.713 52.336 53.061 0 0 0 0 0.038104 1 26145 54.611 12.959 1 NaN NaN 0 2740200 0 2740200 26153 1242 9882 10153 40924 40924 NIILTTMPAGTK 12 1 0 Oxidation (M) _NIILTTM(ox)PAGTK_ NIILTTM(1)PAGTK NIILTTM(74.16)PAGTK 0 1 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.3531 2 638.352488 1274.69042 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.054 1 60.054 59.554 60.554 0 0 0 0 0.00042592 1 34256 74.162 47.648 1 26154 135 9883 10154 40925 40925 115 NIILTTMPAGTK 12 1 0 Oxidation (M) _NIILTTM(ox)PAGTK_ NIILTTM(1)PAGTK NIILTTM(85.38)PAGTK 0 1 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3544 2 638.352488 1274.69042 NaN NaN NaN -0.15121 -9.6523E-05 NaN NaN NaN NaN 58.84 0.20098 58.84 58.711 58.912 3.8147E-06 0 0 0 0.00023995 1 34233 85.377 49.434 1 NaN NaN 0 4650800 4650800 0 26155 135 9883 10154 40926 40926 115 NIINEEDADTMR 12 0 1 Oxidation (M) _NIINEEDADTM(ox)R_ NIINEEDADTM(1)R NIINEEDADTM(100.88)R 0 1 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8242 2 718.819738 1435.62492 72028.09 0.88173 0.0006338 -0.57481 -0.00041319 0.30692 0.00022062 718.819252451126 723.82353803017 38.898 0.54228 38.898 38.65 39.193 0 204 43 7 0 0 0 1.2309E-05 2 20042 100.88 64.454 1 0.56847 0.57739 0 18291000 11066000 7224900 26156 1991 9884 10155 40927;40928 40928 1820 NIINEEDADTMR 12 0 1 Oxidation (M) _NIINEEDADTM(ox)R_ NIINEEDADTM(1)R NIINEEDADTM(94.69)R 0 1 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.8248 2 718.819738 1435.62492 71622.46 0.50746 0.00036477 -0.13776 -9.9023E-05 0.36971 0.00026575 718.819579532706 723.823884990985 37.948 0.43113 37.948 37.718 38.15 0 142 31 7 0 0 0 5.7534E-05 2 19777 94.692 72.699 1 0.58484 0.6402 0 32968000 20292000 12676000 26157 1991 9884 10155 40929;40930 40930 1820 NIINEEDADTMR 12 0 1 Oxidation (M) _NIINEEDADTM(ox)R_ NIINEEDADTM(1)R NIINEEDADTM(41.16)R 0 1 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.8198 2 718.819738 1435.62492 73960.52 0.67547 0.00048554 -0.2373 -0.00017057 0.43817 0.00031497 718.819378465216 723.823913880694 44.856 0.56295 44.856 44.538 45.101 0 128 43 4 0 0 0 0.0086677 1 21382 41.164 23.728 1 0.59951 0.52068 0 2288100 1482900 805240 26158 1991 9884 10155 40931 40931 1820 NIIQQAIDAGEVPSYNAFVK 20 1 0 Unmodified _NIIQQAIDAGEVPSYNAFVK_ 0 0 0 Q2VIL4;A0A024QZN2;Q8WXX5 Q2VIL4 Q2VIL4 hCG_2024613;DNAJC9 DnaJ homolog subfamily C member 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1089.5671 2 1089.06549 2176.11643 60930.93 0.26154 0.00028483 0.092129 0.00010033 0.35366 0.00038516 1089.56746239094 1093.07075249217 119.55 0.32345 119.55 119.34 119.67 -7.6294E-06 49 23 4 0 0 0 3.0905E-05 2 78829 48.14 40.77 1 0.47503 0.47907 0 7747000 4354600 3392400 26159 24 9885 10156 40932;40933 40933 NIIQQAIDAGEVPSYNAFVK 20 1 0 Unmodified _NIIQQAIDAGEVPSYNAFVK_ 0 0 0 Q2VIL4;A0A024QZN2;Q8WXX5 Q2VIL4 Q2VIL4 hCG_2024613;DNAJC9 DnaJ homolog subfamily C member 9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1093.5752 2 1089.06549 2176.11643 NaN NaN NaN -3.0321 -0.0033021 NaN NaN NaN NaN 132.73 0.42308 132.73 132.42 132.84 0 0 0 0 0.013736 1 80771 37.013 23.812 1 NaN NaN 0 1228300 0 1228300 26160 24 9885 10156 40934 40934 NIIQQAIDAGEVPSYNAFVK 20 1 0 Unmodified _NIIQQAIDAGEVPSYNAFVK_ 0 0 0 Q2VIL4;A0A024QZN2;Q8WXX5 Q2VIL4 Q2VIL4 hCG_2024613;DNAJC9 DnaJ homolog subfamily C member 9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1093.5746 2 1089.06549 2176.11643 58646.37 0.70088 0.00076331 -1.1614 -0.0012649 -0.46057 -0.00050159 1089.5664503124 1093.57328339373 132.49 0.42265 132.49 132.23 132.65 1.5259E-05 64 17 7 0 0 0 0.0024091 1 79658 33.204 21.227 1 0.81054 0.65624 0 4369600 2849700 1519800 26161 24 9885 10156 40935 40935 NIIRPQLK 8 1 1 Unmodified _NIIRPQLK_ 0 0 1 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.3141 2 491.313826 980.613099 88958.05 0.24272 0.00011925 0.16343 8.0298E-05 0.40615 0.00019955 491.313802612524 500.325159377968 34.858 0.37087 34.858 34.667 35.038 0 119 33 5 0 0 0 0.023281 1 17427 94.006 33.712 1 0.85524 0.98094 0 26564000 14518000 12045000 26162 1676 9886 10157 40936 40936 NIITNLSK 8 1 0 Unmodified _NIITNLSK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 910.545 1 902.530558 901.523281 65195.91 0.82306 0.00074283 0.022016 1.987E-05 0.84507 0.0007627 902.530227628024 910.544652123024 55.49 0.17522 55.49 55.39 55.565 3.8147E-06 55 15 5 0 0 0 1.5371E-05 1 31183 147.36 60.569 1 1.0081 1.0053 0 26374000 12160000 14213000 26163 1470 9887 10158 40937 40937 NIITNLSK 8 1 0 Unmodified _NIITNLSK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.7687 2 451.768917 901.523281 88939.34 0.14764 6.6697E-05 -0.40837 -0.00018449 -0.26073 -0.00011779 451.768677432393 455.775792585736 54.167 1.8368 54.167 53.176 55.012 0 627 167 4 0 0 0 0.0056806 1 30893 89.698 37.911 1 1.1499 1.3374 0 236950000 115830000 121120000 26164 1470 9887 10158 40938 40938 NIITNLSK 8 1 0 Unmodified _NIITNLSK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 451.769 2 451.768917 901.523281 90308.49 -0.19862 -8.9729E-05 -0.039029 -1.7632E-05 -0.23764 -0.00010736 451.76880664896 455.775898128906 64.222 2.659 64.222 63.057 65.716 0 1021 223 7 0 0 0 0.029954 1 32136 52.255 24.037 1 1.5644 1.2867 0 28168000 10921000 17247000 26165 1470 9887 10158 40939 40939 NIIVFYGSQTGTAEEFANR 19 0 1 Unmodified _NIIVFYGSQTGTAEEFANR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;C9JU80 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1059.0199 2 1059.01854 2116.02253 NaN NaN NaN -0.1163 -0.00012316 NaN NaN NaN NaN 104.64 0.28197 104.64 104.52 104.8 7.6294E-06 0 0 0 0.0039925 1 64668 42.789 34.878 1 NaN NaN 0 3130300 3130300 0 26166 719 9888 10159 40940 40940 NIIVFYGSQTGTAEEFANR 19 0 1 Unmodified _NIIVFYGSQTGTAEEFANR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;C9JU80 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.024 2 1059.01854 2116.02253 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.92 1 103.92 103.42 104.42 0 0 0 0 0.011167 1 65783 43.761 36.217 1 26167 719 9888 10159 40941 40941 NIIVFYGSQTGTAEEFANR 19 0 1 Unmodified _NIIVFYGSQTGTAEEFANR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;C9JU80 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1059.0198 2 1059.01854 2116.02253 60175.04 0.42899 0.00045431 0.85114 0.00090137 1.2801 0.0013557 1059.52139847421 1064.52499466202 115.91 0.30068 115.91 115.82 116.12 0 51 14 6 0 0 0 0.00018911 2 67076 46.481 43.772 1 0.43095 0.36694 0 3168000 2209900 958040 26168 719 9888 10159 40942;40943 40942 NILDSKPTANK 11 2 0 Unmodified _NILDSKPTANK_ 0 0 1 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.8469 2 600.832777 1199.651 77925.63 0.52989 0.00031837 -0.22288 -0.00013391 0.30701 0.00018446 600.832619843722 608.846823668182 25.457 0.4511 25.457 25.312 25.763 0 101 24 8 0 0 0 1.5463E-07 1 11008 114.39 86.658 1 3.0203 3.5657 0 53972000 11642000 42330000 26169 340 9889 10160 40944 40944 NILDSKPTANK 11 2 0 Unmodified _NILDSKPTANK_ 0 0 1 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 406.2334 3 400.890944 1199.651 94389.73 -0.01161 -4.6544E-06 -0.092176 -3.6953E-05 -0.10379 -4.1607E-05 400.890844735717 406.233704825068 25.467 0.34478 25.467 25.33 25.675 0 75 18 7 0 0 0 0.00021067 2 11066 77.062 67.874 1 3.5586 4.2133 0 29630000 6830100 22800000 26170 340 9889 10160 40945;40946 40945 NILDSKPTANK 11 2 0 Unmodified _NILDSKPTANK_ 0 0 1 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.847 2 600.832777 1199.651 77446.41 0.71821 0.00043152 -0.32105 -0.00019289 0.39717 0.00023863 600.832457762356 608.846853906738 25.167 0.33586 25.167 25.038 25.374 0 59 12 8 0 0 0 1.4263E-12 2 10767 150.04 104.36 1 3.2557 3.784 0 131580000 30148000 101430000 26171 340 9889 10160 40947;40948 40947 NILDSKPTANK 11 2 0 Unmodified _NILDSKPTANK_ 0 0 1 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 406.2339 3 400.890944 1199.651 94708.07 0.28232 0.00011318 -0.22387 -8.9748E-05 0.05845 2.3432E-05 400.890613201727 406.233679284545 25.169 0.34104 25.169 25.012 25.353 0 49 12 7 0 0 0 0.00027521 2 10814 73.951 63.341 1 3.6743 4.2525 0 45301000 9463200 35837000 26172 340 9889 10160 40949;40950 40949 NILDSKPTANK 11 2 0 Unmodified _NILDSKPTANK_ 0 0 1 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.8471 2 600.832777 1199.651 78054.63 0.45936 0.000276 0.033281 1.9996E-05 0.49264 0.000296 600.832633885571 608.846998840477 28.17 0.41221 28.17 27.949 28.361 0 88 20 7 0 0 0 0.0023334 1 11163 86.18 57.093 1 8.2778 7.0868 0 9164900 940170 8224700 26173 340 9889 10160 40951 40951 NILDSKPTANK 11 2 0 Unmodified _NILDSKPTANK_ 0 0 1 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.8469 2 600.832777 1199.651 NaN NaN NaN 0.057608 3.4613E-05 NaN NaN NaN NaN 28.172 0.50766 28.172 27.997 28.505 -1.9073E-06 0 0 0 0.00095714 1 10659 96.143 57.18 1 NaN NaN 0 6436000 0 6436000 26174 340 9889 10160 40952 40952 NILEESLCELVAK 13 1 0 Unmodified _NILEESLCELVAK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.8721 2 759.397624 1516.78069 70350.99 1.0616 0.00080615 -1.2293 -0.00093353 -0.16774 -0.00012738 759.397237940093 763.403918925867 120.1 0.41852 120.1 119.89 120.31 0 132 30 6 0 0 0 0.0047121 1 79249 60.641 60.641 1 0.47702 0.50123 0 19653000 12937000 6715800 26175 1665 9890 10161 40953 40953 NILEESLCELVAK 13 1 0 Unmodified _NILEESLCELVAK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.4052 2 759.397624 1516.78069 69649.3 0.87898 0.0006675 -0.78437 -0.00059565 0.094611 7.1848E-05 759.396866478415 763.404612516997 133.41 0.57469 133.41 133.19 133.77 0 123 24 8 0 0 0 0.00032476 2 81241 64.439 54.067 1 0.32496 0.25169 0 13181000 10160000 3020700 26176 1665 9890 10161 40954;40955 40955 NILEESLCELVAK 13 1 0 Unmodified _NILEESLCELVAK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.3959 2 759.397624 1516.78069 68899.61 1.1369 0.00086339 -1.1601 -0.000881 -0.023185 -1.7606E-05 759.396483896468 763.404479876491 133.21 0.48689 133.21 132.93 133.41 0 91 20 6 0 0 0 0.061366 1 80131 26.786 26.786 1 0.35396 0.28903 0 8046900 6130100 1916800 26177 1665 9890 10161 40956 40956 NILFVITKPDVYK 13 2 0 Unmodified _NILFVITKPDVYK_ 0 0 1 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;A0A024RB41;Q13765;E9PAV3;F8VZ58;A8K6N6;Q9BZK3 F8W1N5 F8W1N5 NACA;hCG_2016482;NACAP1 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form;Putative nascent polypeptide-associated complex subunit alpha-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.3835 2 775.453059 1548.89157 71374.95 0.85677 0.00066438 0.41272 0.00032004 1.2695 0.00098442 775.453598237074 783.467432900013 103.15 0.99197 103.15 102.71 103.71 0 292 83 6 0 0 0 0.00058083 3 63754 91.936 86.595 1 1.9771 2.3434 0 28050000 8989900 19060000 26178 324 9891 10162 40957;40958;40959 40958 NILFVITKPDVYK 13 2 0 Unmodified _NILFVITKPDVYK_ 0 0 1 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;A0A024RB41;Q13765;E9PAV3;F8VZ58;A8K6N6;Q9BZK3 F8W1N5 F8W1N5 NACA;hCG_2016482;NACAP1 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form;Putative nascent polypeptide-associated complex subunit alpha-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.4676 2 775.453059 1548.89157 71683.93 0.45598 0.00035359 0.32183 0.00024956 0.77781 0.00060315 775.954912683907 783.467269702147 101.94 0.79957 101.94 101.49 102.29 -7.6294E-06 191 61 7 0 0 0 6.2436E-08 2 64133 113.47 113.47 1 2.1863 2.5275 0 34201000 11273000 22927000 26179 324 9891 10162 40960;40961 40960 NILLTIGSYK 10 1 0 Unmodified _NILLTIGSYK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.3328 2 561.331882 1120.64921 83010.05 0.79052 0.00044375 -0.35923 -0.00020165 0.4313 0.0002421 561.331570303415 565.338897284233 98.094 0.63932 98.094 97.798 98.437 0 127 50 4 0 0 0 0.020901 1 59753 46.462 43.928 1 0.81967 0.83448 0 14138000 7073500 7064200 26180 1259 9892 10163 40962 40962 NILLTIGSYK 10 1 0 Unmodified _NILLTIGSYK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.3395 2 561.331882 1120.64921 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.243 1 98.243 97.743 98.743 0 0 0 0 0.021773 1 60031 53.327 22.253 1 26181 1259 9892 10163 40963 40963 NILLTIGSYK 10 1 0 Unmodified _NILLTIGSYK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.3401 2 561.331882 1120.64921 84996.48 0.90257 0.00050664 -0.1286 -7.2186E-05 0.77398 0.00043446 561.331818596651 565.338942269668 97.224 0.61622 97.224 96.93 97.547 0 129 48 4 0 0 0 0.0083024 1 60754 56.258 56.258 1 0.79301 0.80684 0 12488000 6377200 6110500 26182 1259 9892 10163 40964 40964 NILMFTGETEATK 13 1 0 Oxidation (M) _NILM(ox)FTGETEATK_ NILM(1)FTGETEATK NILM(89.27)FTGETEATK 0 1 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.8676 2 735.860874 1469.7072 70395.81 1.2248 0.00090128 -0.94045 -0.00069204 0.28435 0.00020924 736.362365023256 739.867452170636 80.871 0.57231 80.871 80.506 81.079 0 186 49 7 0 0 0 6.7759E-05 2 48170 89.266 89.266 1 2.0056 1.9808 0 25424000 9973400 15450000 26183 765 9893 10164 40965;40966 40966 594 NILMFTGETEATK 13 1 0 Oxidation (M) _NILM(ox)FTGETEATK_ NILM(1)FTGETEATK NILM(78.91)FTGETEATK 0 1 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.8684 2 735.860874 1469.7072 NaN NaN NaN 0.028697 2.1117E-05 NaN NaN NaN NaN 80.273 0.51454 80.273 80.07 80.585 0 0 0 0 0.00028018 1 47621 78.908 51.81 1 NaN NaN 0 16572000 0 16572000 26184 765 9893 10164 40967 40967 594 NILMFTGETEATK 13 1 0 Oxidation (M) _NILM(ox)FTGETEATK_ NILM(1)FTGETEATK NILM(55.43)FTGETEATK 0 1 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.8615 2 735.860874 1469.7072 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.291 1 80.291 79.791 80.791 0 0 0 0 0.0037695 1 47723 55.426 18.314 1 26185 765 9893 10164 40968 40968 594 NILMFTGETEATK 13 1 0 Oxidation (M) _NILM(ox)FTGETEATK_ NILM(1)FTGETEATK NILM(93.06)FTGETEATK 0 1 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8676 2 735.860874 1469.7072 71709.38 0.80065 0.00058917 -0.49365 -0.00036326 0.307 0.00022591 735.860862645774 739.867723840131 79.163 0.81352 79.163 78.719 79.533 0 213 69 6 0 0 0 4.5654E-05 1 48023 93.058 93.058 1 1.8083 1.818 0 27406000 8587100 18819000 26186 765 9893 10164 40969 40969 594 NILMFTGETEATK 13 1 0 Oxidation (M) _NILM(ox)FTGETEATK_ NILM(1)FTGETEATK NILM(78.69)FTGETEATK 0 1 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8681 2 735.860874 1469.7072 NaN NaN NaN -0.84263 -0.00062006 NaN NaN NaN NaN 79.755 0.50041 79.755 79.491 79.991 0 0 0 0 0.00029128 1 48578 78.692 52.094 1 NaN NaN 0 18020000 0 18020000 26187 765 9893 10164 40970 40970 594 NILNKPEVNQK 11 2 0 Unmodified _NILNKPEVNQK_ 0 0 1 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.8825 2 648.867151 1295.71975 NaN NaN NaN -0.079853 -5.1814E-05 NaN NaN NaN NaN 27.687 0.23974 27.687 27.506 27.746 0 0 0 0 0.029169 1 12773 76.465 54.228 1 NaN NaN 0 9603400 0 9603400 26188 1602 9894 10165 40971 40971 NILNKPEVNQK 11 2 0 Unmodified _NILNKPEVNQK_ 0 0 1 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.8812 2 648.867151 1295.71975 78249.91 1.032 0.00066962 -0.021046 -1.3656E-05 1.0109 0.00065596 648.867781513099 656.880994628509 26.954 0.25567 26.954 26.804 27.059 0 41 11 5 0 0 0 2.6686E-07 1 12269 117.53 101.32 1 2.0269 2.318 0 16818000 5427300 11391000 26189 1602 9894 10165 40972 40972 NILSVVGTDALK 12 1 0 Unmodified _NILSVVGTDALK_ 0 0 0 Q6IAP9;Q5T1M7;Q59EL4;O43172;B2R7V4 Q6IAP9 Q6IAP9 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.3578 2 615.358628 1228.7027 NaN NaN NaN 0.094314 5.8037E-05 NaN NaN NaN NaN 103.53 0.40182 103.53 103.32 103.72 7.6294E-06 0 0 0 0.0017796 1 63825 74.162 45.763 1 NaN NaN 0 4765600 4765600 0 26190 1381 9895 10166 40973 40973 NILSVVGTDALK 12 1 0 Unmodified _NILSVVGTDALK_ 0 0 0 Q6IAP9;Q5T1M7;Q59EL4;O43172;B2R7V4 Q6IAP9 Q6IAP9 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3663 2 615.358628 1228.7027 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.64 1 103.64 103.14 104.14 0 0 0 0 0.0088094 1 63945 58.37 38.041 1 26191 1381 9895 10166 40974 40974 NINAYVVFK 9 1 0 Unmodified _NINAYVVFK_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.298 2 534.297842 1066.58113 83540.04 0.52465 0.00028032 0.082567 4.4115E-05 0.60722 0.00032444 534.297803749582 538.30494910904 84.621 0.55713 84.621 84.4 84.957 0 158 46 5 0 0 0 0.0011494 2 51965 89.296 89.296 1 0.96656 1.0644 0 43036000 20302000 22734000 26192 1566 9896 10167 40975;40976 40975 NINAYVVFK 9 1 0 Unmodified _NINAYVVFK_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.2974 2 534.297842 1066.58113 82675.89 0.5462 0.00029183 0.018896 1.0096E-05 0.5651 0.00030193 534.29784641875 538.30483672869 98.443 0.47506 98.443 98.232 98.707 7.6294E-06 130 29 8 0 0 0 0.039097 1 55469 42.396 42.396 1 0.97996 0.77579 0 10432000 5713500 4718100 26193 1566 9896 10167 40977 40977 NINAYVVFK 9 1 0 Unmodified _NINAYVVFK_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.3051 2 534.297842 1066.58113 83700.85 0.60203 0.00032166 -0.2489 -0.00013299 0.35313 0.00018868 534.297729168018 538.304657070669 98.244 0.41259 98.244 98.029 98.442 0 122 25 8 0 0 0 0.0020321 1 54517 77.674 73.537 1 0.91124 0.74582 0 8477300 4156100 4321200 26194 1566 9896 10167 40978 40978 NINNAFGPGTANER 14 0 1 Unmodified _NINNAFGPGTANER_ 0 0 0 B9ZVV8;B4DND2;Q96H41;Q53H47 B9ZVV8 B9ZVV8 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.8574 2 737.855303 1473.69605 75166.27 0.77719 0.00057345 0.38371 0.00028312 1.1609 0.00085658 738.357071668444 743.361172831234 43.526 0.2821 43.526 43.414 43.696 0 69 21 6 0 0 0 0.00021563 1 23676 83.397 58.605 1 0.73493 0.72077 0 13919000 6427600 7491400 26195 1011 9897 10168 40979 40979 NINTFVETPVQK 12 1 0 Unmodified _NINTFVETPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.3803 2 695.372266 1388.72998 72208.62 0.6767 0.00047056 -0.19922 -0.00013853 0.47748 0.00033203 695.372257117988 699.379251395446 73.703 1.4099 73.703 73.238 74.648 0 703 124 8 0 0 0 1.4895E-13 4 43057 136.96 97.485 1 1.7836 2.039 0 183540000 64673000 118870000 26196 1569 9898 10169 40980;40981;40982;40983 40981 NINTFVETPVQK 12 1 0 Unmodified _NINTFVETPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.3795 2 695.372266 1388.72998 72007.72 0.74189 0.00051589 -0.10846 -7.5422E-05 0.63342 0.00044047 695.372264353415 699.379251225301 72.559 1.4773 72.559 72.103 73.58 0 677 129 8 0 0 0 1.2308E-37 3 43321 178.84 131.64 1 1.8601 2.1613 0 230510000 80239000 150270000 26197 1569 9898 10169 40984;40985;40986 40984 NINTFVETPVQK 12 1 0 Unmodified _NINTFVETPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.3796 2 695.372266 1388.72998 72254.13 0.4473 0.00031104 0.06649 4.6236E-05 0.51379 0.00035728 695.372371893528 699.379405708883 84.097 2.8172 84.097 83.667 86.484 -7.6294E-06 961 204 10 0 0 0 0.00021299 5 46139 89.171 61.158 1 3.4062 2.9313 0 91504000 20479000 71025000 26198 1569 9898 10169 40987;40988;40989;40990;40991 40989 NINTFVETPVQK 12 1 0 Unmodified _NINTFVETPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 699.3796 2 695.372266 1388.72998 72669.94 0.67792 0.00047141 -0.11687 -8.1265E-05 0.56106 0.00039014 695.372158383164 699.379279393919 84.171 2.9979 84.171 83.801 86.799 0 840 203 10 0 0 0 0.00050599 4 45323 69.979 44.041 1 3.6208 3.0891 0 96958000 20222000 76736000 26199 1569 9898 10169 40992;40993;40994;40995 40993 NIPAFLPNVLSLK 13 1 0 Unmodified _NIPAFLPNVLSLK_ 0 0 0 E7EV89;B4DVX3;B4DVM9;P29375 E7EV89 E7EV89 KDM5A Lysine-specific demethylase 5A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.434 2 713.426845 1424.83914 82275.97 1.0772 0.00076849 -0.52813 -0.00037678 0.54905 0.00039171 713.426298787954 717.433334869377 128.01 0.28493 128.01 127.89 128.18 0 51 16 5 0 0 0 0.011999 2 85541 39.917 39.917 1 0.48829 0.52732 0 3642900 2163700 1479200 26200 1040 9899 10170 40996;40997 40997 NIPGITLLNVSK 12 1 0 Unmodified _NIPGITLLNVSK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8902 2 634.88227 1267.74999 75944.09 0.72239 0.00045863 -0.061216 -3.8865E-05 0.66117 0.00041977 634.882471649542 638.889239853667 109.45 1.6637 109.45 108.98 110.65 0 757 119 10 0 0 0 0.00012005 4 68259 94.616 66.217 1 0.90871 1.0907 0 1067900000 560880000 507050000 26201 1548 9900 10171 40998;40999;41000;41001 40999 NIPGITLLNVSK 12 1 0 Unmodified _NIPGITLLNVSK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.8826 2 634.88227 1267.74999 75983.45 0.65215 0.00041404 -0.0523 -3.3204E-05 0.59985 0.00038084 634.882448159256 638.889276872984 108.8 2.4606 108.8 108.39 110.85 -7.6294E-06 808 170 11 0 0 0 0.00014324 5 69518 93.258 69.938 1 0.9114 1.0774 0 1533900000 802570000 731350000 26202 1548 9900 10171 41002;41003;41004;41005;41006 41003 NIPGITLLNVSK 12 1 0 Unmodified _NIPGITLLNVSK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.8903 2 634.88227 1267.74999 78335.89 0.65918 0.0004185 0.42437 0.00026942 1.0836 0.00068793 634.882662196945 638.889396757579 111.1 0.49261 111.1 110.87 111.37 7.6294E-06 76 36 4 0 0 0 0.0077781 1 71593 48.284 34.514 1 1.0613 1.0552 0 6211200 3817800 2393500 26203 1548 9900 10171 41007 41007 NIPGITLLNVSK 12 1 0 Unmodified _NIPGITLLNVSK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.8829 2 634.88227 1267.74999 NaN NaN NaN 0.095869 6.0866E-05 NaN NaN NaN NaN 111.24 0.24751 111.24 111.17 111.42 0 0 0 0 0.027596 1 71776 48.44 27.538 1 NaN NaN 0 2371900 2371900 0 26204 1548 9900 10171 41008 41008 NIPGITLLNVSK 12 1 0 Unmodified _NIPGITLLNVSK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.8829 2 634.88227 1267.74999 75759.17 0.61935 0.00039321 -0.18869 -0.00011979 0.43066 0.00027342 634.882447523447 638.889144990152 120.76 2.038 120.76 120.48 122.52 0 416 99 11 0 0 0 0.00014324 4 71629 93.258 64.531 1 1.0451 0.9263 0 330430000 161330000 169100000 26205 1548 9900 10171 41009;41010;41011;41012 41010 NIPGITLLNVSK 12 1 0 Unmodified _NIPGITLLNVSK_ 0 0 0 P36578;Q59GY2;B4DMJ6;H3BM89;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.8828 2 634.88227 1267.74999 75913.08 0.82063 0.000521 -0.28213 -0.00017912 0.53849 0.00034188 634.88239877902 638.889081746631 120.53 1.8873 120.53 120.2 122.09 -7.6294E-06 502 96 11 0 0 0 0.00043863 4 70535 70.977 48.842 1 0.99798 0.86807 0 334460000 169380000 165080000 26206 1548 9900 10171 41013;41014;41015;41016 41014 NIPGPHMVLVPK 12 1 0 Oxidation (M) _NIPGPHM(ox)VLVPK_ NIPGPHM(1)VLVPK NIPGPHM(50.8)VLVPK 0 1 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.3809 2 659.371015 1316.72748 76964.99 0.35099 0.00023143 -0.4921 -0.00032448 -0.14111 -9.3046E-05 659.37143863163 663.378571314804 54.857 0.468 54.857 54.601 55.069 0 132 44 5 0 0 0 0.0026616 1 30783 50.805 50.805 1 3.7093 4.0307 0 47059000 10586000 36473000 26207 1391 9901 10172 41017 41017 1067 NIPPYFVALVPQEEELDDQK 20 1 0 Unmodified _NIPPYFVALVPQEEELDDQK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1177.0972 2 1172.589 2343.16344 56368.08 0.10285 0.00012061 0.46255 0.00054238 0.5654 0.00066299 1173.09088375254 1177.09792263999 124.2 0.84255 124.2 123.87 124.71 -7.6294E-06 445 58 12 0 0 0 1.6466E-13 2 80507 111.12 111.12 1 0.37651 0.43042 0 183420000 130630000 52795000 26208 82 9902 10173 41018;41019 41019 NIPPYFVALVPQEEELDDQK 20 1 0 Unmodified _NIPPYFVALVPQEEELDDQK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1173.0902 2 1172.589 2343.16344 56209.14 0.22452 0.00026327 0.55542 0.00065128 0.77993 0.00091454 1173.09096767505 1177.09801906054 123.83 0.92709 123.83 123.53 124.45 0 440 62 12 0 0 0 2.2386E-07 2 82146 85.457 85.457 1 0.38188 0.44276 0 216730000 157540000 59195000 26209 82 9902 10173 41020;41021 41020 NIPPYFVALVPQEEELDDQK 20 1 0 Unmodified _NIPPYFVALVPQEEELDDQK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1173.0941 2 1172.589 2343.16344 55333.9 0.13849 0.00016239 0.46588 0.00054629 0.60437 0.00070868 1173.09101291717 1177.0977341885 134.6 0.39166 134.6 134.41 134.8 0 46 11 9 0 0 0 2.6387E-23 1 82245 128.95 128.95 1 0.28579 0.24752 0 120680000 91273000 29403000 26210 82 9902 10173 41022 41022 NIPPYFVALVPQEEELDDQK 20 1 0 Unmodified _NIPPYFVALVPQEEELDDQK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1173.0918 2 1172.589 2343.16344 55932.91 0.2713 0.00031812 0.63728 0.00074726 0.90857 0.0010654 1173.09115561312 1177.097778441 134.54 0.39699 134.54 134.36 134.76 0 47 11 10 0 0 0 1.8993E-19 3 81308 125.22 125.22 1 0.27667 0.23687 0 121510000 94682000 26823000 26211 82 9902 10173 41023;41024;41025 41024 NIQGTITGDILPR 13 0 1 Unmodified _NIQGTITGDILPR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.3951 2 699.39099 1396.76743 73675.38 0.73164 0.0005117 0.1132 7.9168E-05 0.84483 0.00059087 699.391208598908 704.395194197823 95.27 0.86713 95.27 94.918 95.785 -7.6294E-06 316 68 6 0 0 0 1.8864E-13 1 57837 129.89 129.89 1 1.2898 1.3086 0 28854000 14475000 14378000 26212 1412 9903 10174 41026 41026 NIQGTITGDILPR 13 0 1 Unmodified _NIQGTITGDILPR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.3961 2 699.39099 1396.76743 73404.49 0.90013 0.00062954 0.018229 1.2749E-05 0.91836 0.00064229 699.39101066344 704.395221265167 94.439 0.70766 94.439 94.163 94.87 0 308 59 7 0 0 0 1.9071E-23 1 58654 152.62 152.62 1 1.2773 1.4709 0 54041000 22968000 31073000 26213 1412 9903 10174 41027 41027 NIQGTITGDILPR 13 0 1 Unmodified _NIQGTITGDILPR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.3957 2 699.39099 1396.76743 72895.11 0.77592 0.00054267 0.159 0.0001112 0.93492 0.00065387 699.391215725621 704.395161489041 108.66 0.67332 108.66 108.36 109.03 7.6294E-06 151 32 7 0 0 0 0.00032476 1 62332 64.439 64.439 1 1.7516 1.432 0 13802000 5468400 8333600 26214 1412 9903 10174 41028 41028 NIQGTITGDILPR 13 0 1 Unmodified _NIQGTITGDILPR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.3956 2 699.39099 1396.76743 73864.44 0.5897 0.00041243 0.10703 7.4858E-05 0.69673 0.00048729 699.391138402093 704.395144849471 108.52 0.60778 108.52 108.29 108.89 0 152 30 7 0 0 0 0.00021605 1 61322 69.721 65.02 1 1.6023 1.2949 0 11500000 4522800 6977600 26215 1412 9903 10174 41029 41029 NIQQLIELVR 10 0 1 Unmodified _NIQQLIELVR_ 0 0 0 B7Z7T1;B2RAT5;A0A024RA74;Q8TCY9 B7Z7T1 B7Z7T1 URG4;URGCP Up-regulator of cell proliferation ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.3712 2 613.366787 1224.71902 NaN NaN NaN -0.41499 -0.00025454 NaN NaN NaN NaN 117.77 0.31672 117.77 117.61 117.93 7.6294E-06 0 0 0 0.017537 1 75558 55.549 34.086 1 NaN NaN 0 1547900 0 1547900 26216 298 9904 10175 41030 41030 NIQQLIELVR 10 0 1 Unmodified _NIQQLIELVR_ 0 0 0 B7Z7T1;B2RAT5;A0A024RA74;Q8TCY9 B7Z7T1 B7Z7T1 URG4;URGCP Up-regulator of cell proliferation MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3706 2 613.366787 1224.71902 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.28 1 117.28 116.78 117.78 0 0 0 0 0.0018994 1 76891 68.224 25.625 1 26217 298 9904 10175 41031 41031 NIQVSHQEFSK 11 1 0 Unmodified _NIQVSHQEFSK_ 0 0 0 B7Z5C1;B4DHD2;Q4W4Y1;Q8WUM4 B7Z5C1 B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.8411 2 658.833308 1315.65206 79816.27 0.5004 0.00032968 -0.55157 -0.0003634 -0.051177 -3.3717E-05 659.334075522044 662.840123775286 27.537 0.23913 27.537 27.418 27.657 0 30 16 4 0 0 0 8.4595E-06 1 12751 109.42 109.42 1 4.9619 5.2417 0 3793700 531090 3262600 26218 974 9905 10176 41032 41032 NIQVSHQEFSK 11 1 0 Unmodified _NIQVSHQEFSK_ 0 0 0 B7Z5C1;B4DHD2;Q4W4Y1;Q8WUM4 B7Z5C1 B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.84 2 658.833308 1315.65206 NaN NaN NaN -1.0191 -0.00067142 NaN NaN NaN NaN 26.954 0.25567 26.954 26.804 27.059 0 0 0 0 0.025724 1 12349 51.445 15.502 1 NaN NaN 0 5717900 0 5717900 26219 974 9905 10176 41033 41033 NISHDTFGTTYGR 13 0 1 Unmodified _NISHDTFGTTYGR_ 0 0 0 A8K800;Q9H7B2 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.8516 2 734.844404 1467.67426 71252.63 0.81968 0.00060234 0.31212 0.00022936 1.1318 0.0008317 734.844301104064 739.848944863051 37.223 0.46591 37.223 37.025 37.491 0 193 39 8 0 0 0 7.3034E-05 2 18822 94.82 84.533 1 0.86172 0.95955 0 80184000 43289000 36895000 26220 773 9906 10177 41034;41035 41034 NISHDTFGTTYGR 13 0 1 Unmodified _NISHDTFGTTYGR_ 0 0 0 A8K800;Q9H7B2 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.568 3 490.232028 1467.67426 85488.9 0.39028 0.00019133 -0.035732 -1.7517E-05 0.35455 0.00017381 490.231958464361 493.56807752491 37.234 0.93018 37.234 36.993 37.923 0 355 78 8 0 0 0 4.1915E-05 2 18840 67.115 59.391 1 0.93114 1.052 0 102030000 54326000 47705000 26221 773 9906 10177 41036;41037 41036 NISHDTFGTTYGR 13 0 1 Unmodified _NISHDTFGTTYGR_ 0 0 0 A8K800;Q9H7B2 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.9036 3 490.232028 1467.67426 85508.16 0.39342 0.00019287 -0.098516 -4.8296E-05 0.29491 0.00014457 490.231920269299 493.568125170698 35.91 0.62963 35.91 35.666 36.295 0 321 50 11 0 0 0 4.3683E-05 2 18264 66.004 58.28 1 0.87193 0.99362 0 134950000 76154000 58793000 26222 773 9906 10177 41038;41039 41038 NISHDTFGTTYGR 13 0 1 Unmodified _NISHDTFGTTYGR_ 0 0 0 A8K800;Q9H7B2 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8521 2 734.844404 1467.67426 71037.2 0.76692 0.00056357 -0.10324 -7.5867E-05 0.66368 0.0004877 734.844007465295 739.848583227022 35.914 0.47752 35.914 35.702 36.18 0 196 38 7 0 0 0 8.0871E-14 2 18279 147.58 141.04 1 0.88182 1.0055 0 98021000 48283000 49738000 26223 773 9906 10177 41040;41041 41040 NISHDTFGTTYGR 13 0 1 Unmodified _NISHDTFGTTYGR_ 0 0 0 A8K800;Q9H7B2 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.3513 2 734.844404 1467.67426 70809.79 0.58375 0.00042896 0.19838 0.00014578 0.78213 0.00057474 734.844296515809 739.848918547975 42.73 1.2087 42.73 42.454 43.663 0 260 79 7 0 0 0 0.0032908 2 19912 56.087 51.933 1 1.0649 0.91485 0 7992600 3796700 4195900 26224 773 9906 10177 41042;41043 41042 NISHDTFGTTYGR 13 0 1 Unmodified _NISHDTFGTTYGR_ 0 0 0 A8K800;Q9H7B2 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.5682 3 490.232028 1467.67426 85781.97 0.17897 8.7735E-05 0.11438 5.6074E-05 0.29335 0.00014381 490.232067516574 493.568074471276 42.705 1.3875 42.705 42.395 43.782 0 449 92 9 0 0 0 0.045592 1 20223 13.119 12.33 1 1.026 0.83861 0 15953000 7556400 8396300 26225 773 9906 10177 41044 41044 NISHDTFGTTYGR 13 0 1 Unmodified _NISHDTFGTTYGR_ 0 0 0 A8K800;Q9H7B2 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.849 2 734.844404 1467.67426 69702.64 0.31471 0.00023126 0.14058 0.0001033 0.45529 0.00033456 734.844296139018 739.848699634716 42.821 1.0092 42.821 42.508 43.517 0 267 62 8 0 0 0 0.00014893 3 19498 84.169 74.811 1 1.1245 0.91764 0 9403900 4761400 4642500 26226 773 9906 10177 41045;41046;41047 41046 NISHDTFGTTYGR 13 0 1 Unmodified _NISHDTFGTTYGR_ 0 0 0 A8K800;Q9H7B2 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 490.2318 3 490.232028 1467.67426 85351.23 -0.080275 -3.9353E-05 0.084191 4.1273E-05 0.0039165 1.92E-06 490.232105998503 493.568090259635 42.8 1.2243 42.8 42.508 43.732 0 426 76 9 0 0 0 6.1953E-05 2 19613 70.438 67.664 1 1.0463 0.87495 0 16350000 7902500 8447100 26227 773 9906 10177 41048;41049 41048 NISMSVEGDYTYLR 14 0 1 Oxidation (M) _NISM(ox)SVEGDYTYLR_ NISM(1)SVEGDYTYLR NISM(144.1)SVEGDYTYLR 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.3845 2 832.385245 1662.75594 65116.99 0.65307 0.0005436 -0.15249 -0.00012693 0.50057 0.00041667 832.385208172159 837.389349813585 79.429 0.95828 79.429 79.051 80.009 0 445 85 8 0 0 0 1.8042E-21 3 47005 144.1 144.1 1 1.1732 1.3254 0 101920000 49588000 52332000 26228 2148 9907 10178 41050;41051;41052 41050 1997 NISMSVEGDYTYLR 14 0 1 Oxidation (M) _NISM(ox)SVEGDYTYLR_ NISM(1)SVEGDYTYLR NISM(167.84)SVEGDYTYLR 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.385 2 832.385245 1662.75594 65197.41 0.49714 0.00041381 -0.128 -0.00010655 0.36913 0.00030726 832.3850648956 837.389334125674 78.454 1.112 78.454 77.97 79.082 7.6294E-06 495 98 8 0 0 0 6.2172E-38 2 47461 167.84 167.84 1 1.1785 1.3462 0 150260000 71353000 78910000 26229 2148 9907 10178 41053;41054 41053 1997 NISMSVEGDYTYLR 14 0 1 Oxidation (M) _NISM(ox)SVEGDYTYLR_ NISM(1)SVEGDYTYLR NISM(70.09)SVEGDYTYLR 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 832.3859 2 832.385245 1662.75594 64676.75 0.70406 0.00058605 0.072125 6.0035E-05 0.77619 0.00064609 832.385403297932 837.389731366511 91.556 1.4872 91.556 91.06 92.548 0 410 94 8 0 0 0 9.434E-05 2 50786 70.089 70.089 1 0.55807 0.46169 0 19658000 12787000 6871500 26230 2148 9907 10178 41055;41056 41055 1997 NISMSVEGDYTYLR 14 0 1 Oxidation (M) _NISM(ox)SVEGDYTYLR_ NISM(1)SVEGDYTYLR NISM(69.45)SVEGDYTYLR 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.3867 2 832.385245 1662.75594 65295.91 0.59832 0.00049803 -0.13395 -0.00011149 0.46437 0.00038654 832.385273147348 837.389408135479 91.451 0.99863 91.451 91.059 92.057 0 382 67 8 0 0 0 9.6514E-05 2 49901 69.451 69.451 1 0.58293 0.5053 0 23738000 14858000 8879800 26231 2148 9907 10178 41057;41058 41058 1997 NISMSVEGDYTYLR 14 0 1 Unmodified _NISMSVEGDYTYLR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.3878 2 824.387787 1646.76102 69540.56 0.83931 0.00069192 0.11846 9.7656E-05 0.95777 0.00078957 824.889888390846 829.893720090219 94.163 0.34705 94.163 94.033 94.38 0 74 31 4 0 0 0 0.00017671 2 57249 72.652 67.758 1 0.61866 0.63072 0 9933800 5315800 4618000 26232 2148 9907 10179 41059;41060 41060 NISMSVEGDYTYLR 14 0 1 Unmodified _NISMSVEGDYTYLR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.3881 2 824.387787 1646.76102 NaN NaN NaN 0.50569 0.00041688 NaN NaN NaN NaN 93.308 0.50483 93.308 93.181 93.686 0 0 0 0 0.0027897 1 58062 64.439 40.588 1 NaN NaN 0 6914600 6914600 0 26233 2148 9907 10179 41061 41061 NISMSVEGDYTYLR 14 0 1 Unmodified _NISMSVEGDYTYLR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 829.392 2 824.387787 1646.76102 65542.57 0.88382 0.00072861 -0.2036 -0.00016785 0.68022 0.00056077 824.387216986786 829.392015674607 107.72 0.5569 107.72 107.46 108.02 0 164 31 8 0 0 0 0.00015067 2 61670 76.655 76.655 1 0.89122 0.73219 0 11983000 6519100 5464000 26234 2148 9907 10179 41062;41063 41063 NISMSVEGDYTYLR 14 0 1 Unmodified _NISMSVEGDYTYLR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.3917 2 824.387787 1646.76102 66023.96 0.75305 0.00062081 -0.11358 -9.3636E-05 0.63947 0.00052717 824.889173866133 829.392246523349 107.63 0.66476 107.63 107.33 107.99 -7.6294E-06 177 39 7 0 0 0 0.00022923 1 60710 65.179 65.179 1 0.942 0.77189 0 8913700 3403100 5510600 26235 2148 9907 10179 41064 41064 NISQELNMEQK 11 1 0 Oxidation (M) _NISQELNM(ox)EQK_ NISQELNM(1)EQK NISQELNM(112.71)EQK 0 1 0 A0A0U1RRH6 A0A0U1RRH6 A0A0U1RRH6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.322 2 675.321916 1348.62928 73244.35 0.52147 0.00035216 -0.37831 -0.00025548 0.14316 9.6682E-05 675.321323166653 679.329035989856 33.582 0.39965 33.582 33.386 33.786 0 139 31 7 0 0 0 3.8563E-08 1 16824 112.71 71.717 1 0.84078 0.89134 0 23476000 11685000 11791000 26236 590 9908 10180 41065 41065 445 NISVASCNSSQVVVAVGR 18 0 1 Unmodified _NISVASCNSSQVVVAVGR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 928.9791 2 923.975624 1845.93669 65285.26 0.40805 0.00037702 -0.68661 -0.00063441 -0.27856 -0.00025739 923.97481624832 929.480009221963 77.878 0.52364 77.878 77.607 78.131 0 133 40 6 0 0 0 7.9958E-06 2 46039 81.494 67.831 1 0.60339 0.62171 0 10210000 6208800 4000900 26237 1770 9909 10181 41066;41067 41067 NISVASCNSSQVVVAVGR 18 0 1 Unmodified _NISVASCNSSQVVVAVGR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 924.4751 2 923.975624 1845.93669 NaN NaN NaN -0.59754 -0.00055211 NaN NaN NaN NaN 76.981 0.33287 76.981 76.735 77.068 0 0 0 0 4.7962E-09 2 46476 99.941 74.504 1 NaN NaN 0 5965100 5965100 0 26238 1770 9909 10181 41068;41069 41069 NISVASCNSSQVVVAVGR 18 0 1 Unmodified _NISVASCNSSQVVVAVGR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 929.4844 2 923.975624 1845.93669 NaN NaN NaN -0.081443 -7.5251E-05 NaN NaN NaN NaN 89.253 1.0958 89.253 88.799 89.894 0 0 0 0 9.3143E-06 1 49232 67.964 53.402 1 NaN NaN 0 7264300 0 7264300 26239 1770 9909 10181 41070 41070 NISVASCNSSQVVVAVGR 18 0 1 Unmodified _NISVASCNSSQVVVAVGR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 929.4843 2 923.975624 1845.93669 NaN NaN NaN 0.27831 0.00025715 NaN NaN NaN NaN 89.212 1.2595 89.212 88.748 90.008 -7.6294E-06 0 0 0 4.8597E-06 1 48381 73.927 50.322 1 NaN NaN 0 7725000 0 7725000 26240 1770 9909 10181 41071 41071 NITLDDASAPR 11 0 1 Unmodified _NITLDDASAPR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;E9PLT0;Q9UG93;Q8WU01 Q9GZV0 Q9GZV0 CSDE1;DKFZp586J0620 Cold shock domain-containing protein E1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.8024 2 586.798934 1171.58332 NaN NaN NaN 0.026868 1.5766E-05 NaN NaN NaN NaN 50.82 0.7148 50.82 50.585 51.299 -3.8147E-06 0 0 0 1.5376E-05 2 28006 103.7 54.282 1 NaN NaN 0 32502000 0 32502000 26241 42 9910 10182 41072;41073 41072 NITLDDASAPR 11 0 1 Unmodified _NITLDDASAPR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;E9PLT0;Q9UG93;Q8WU01 Q9GZV0 Q9GZV0 CSDE1;DKFZp586J0620 Cold shock domain-containing protein E1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.8039 2 586.798934 1171.58332 NaN NaN NaN -0.12148 -7.1283E-05 NaN NaN NaN NaN 49.765 0.79286 49.765 49.418 50.21 -3.8147E-06 0 0 0 0.00072394 1 28045 88.495 33.946 1 NaN NaN 0 20088000 0 20088000 26242 42 9910 10182 41074 41074 NITLDDASAPR 11 0 1 Unmodified _NITLDDASAPR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;E9PLT0;Q9UG93;Q8WU01 Q9GZV0 Q9GZV0 CSDE1;DKFZp586J0620 Cold shock domain-containing protein E1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 591.803 2 586.798934 1171.58332 NaN NaN NaN -0.39446 -0.00023147 NaN NaN NaN NaN 58.926 0.6026 58.926 58.58 59.182 3.8147E-06 0 0 0 0.029955 1 29936 50.194 17.354 1 NaN NaN 0 1530200 0 1530200 26243 42 9910 10182 41075 41075 NITLDDASAPR 11 0 1 Unmodified _NITLDDASAPR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;E9PLT0;Q9UG93;Q8WU01 Q9GZV0 Q9GZV0 CSDE1;DKFZp586J0620 Cold shock domain-containing protein E1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 591.803 2 586.798934 1171.58332 NaN NaN NaN -0.46343 -0.00027194 NaN NaN NaN NaN 59.394 0.56773 59.394 59.089 59.656 0 0 0 0 0.044452 1 29606 45.908 16.759 1 NaN NaN 0 2072800 0 2072800 26244 42 9910 10182 41076 41076 NITRPFEDQTSLEFFSK 17 1 1 Unmodified _NITRPFEDQTSLEFFSK_ 0 0 1 A8K800;Q9H7B2;Q5VXN0 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3514 3 687.009217 2058.00582 72888.35 0.73302 0.00050359 0.30703 0.00021093 1.04 0.00071452 687.343694541996 693.016733076797 101.47 1.6024 101.47 100.87 102.47 -7.6294E-06 847 126 10 0 0 0 3.5296E-05 3 62616 55.589 46.77 1 0.90047 1.0862 0 134320000 67244000 67078000 26245 773 9911 10183 41077;41078;41079 41079 NITRPFEDQTSLEFFSK 17 1 1 Unmodified _NITRPFEDQTSLEFFSK_ 0 0 1 A8K800;Q9H7B2;Q5VXN0 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.0173 3 687.009217 2058.00582 72626.66 0.69168 0.00047519 0.11854 8.144E-05 0.81022 0.00055663 687.009349537257 693.351040362303 100.29 1.9541 100.29 99.525 101.48 0 874 155 10 0 0 0 4.192E-07 2 62722 71.592 71.592 1 0.9172 1.0894 0 346430000 196380000 150050000 26246 773 9911 10183 41080;41081 41081 NITRPFEDQTSLEFFSK 17 1 1 Unmodified _NITRPFEDQTSLEFFSK_ 0 0 1 A8K800;Q9H7B2;Q5VXN0 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.009 3 687.009217 2058.00582 72142.62 0.86379 0.00059343 -0.74356 -0.00051083 0.12024 8.2604E-05 687.343252579316 693.016467729386 112.59 0.93326 112.59 112.33 113.27 0 301 45 10 0 0 0 7.5044E-14 2 65379 100.77 97.805 1 1.196 1.0705 0 81776000 36312000 45464000 26247 773 9911 10183 41082;41083 41082 NIVAVGAGFCDGLR 14 0 1 Unmodified _NIVAVGAGFCDGLR_ 0 0 0 Q8N335;C9JM46 Q8N335 Q8N335 GPD1L Glycerol-3-phosphate dehydrogenase 1-like protein;Glycerol-3-phosphate dehydrogenase [NAD(+)] MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.8746 2 724.869368 1447.72418 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.661 1 94.661 94.161 95.161 0 0 0 0 0.0042407 1 57498 56.359 14.819 1 26248 1906 9912 10184 41084 41084 NIVEAAAVR 9 0 1 Unmodified _NIVEAAAVR_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q75MH1;Q76N57 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.7721 2 471.771991 941.529429 86660.73 0.37306 0.000176 -0.30215 -0.00014255 0.070907 3.3452E-05 471.771846433572 476.775930855723 43.632 1.3867 43.632 43.082 44.469 0 695 120 8 0 0 0 7.3905E-06 4 23535 130.04 61.124 1 0.69434 0.82552 0 1219400000 732980000 486430000 26249 319 9913 10185 41085;41086;41087;41088 41087 NIVEAAAVR 9 0 1 Unmodified _NIVEAAAVR_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q75MH1;Q76N57 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.772 2 471.771991 941.529429 NaN NaN NaN -0.24429 -0.00011525 NaN NaN NaN NaN 45.514 0.21603 45.514 45.419 45.635 0 0 0 0 0.027878 1 24464 54.157 16.183 1 NaN NaN 0 5475200 5475200 0 26250 319 9913 10185 41089 41089 NIVEAAAVR 9 0 1 Unmodified _NIVEAAAVR_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q75MH1;Q76N57 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.7719 2 471.771991 941.529429 86975.09 0.36938 0.00017426 -0.37108 -0.00017506 -0.0016989 -8.0149E-07 471.771933063923 476.775864052628 43.009 1.476 43.009 42.377 43.853 0 713 120 9 0 0 0 0.00049492 4 23477 98.458 37.698 1 0.69164 0.81877 0 1650100000 963690000 686440000 26251 319 9913 10185 41090;41091;41092;41093 41092 NIVEAAAVR 9 0 1 Unmodified _NIVEAAAVR_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q75MH1;Q76N57 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.7721 2 471.771991 941.529429 85565.63 0.12527 5.91E-05 -0.42691 -0.0002014 -0.30164 -0.0001423 471.77215532301 476.775676952964 50.242 3.0553 50.242 49.802 52.857 0 1190 239 10 0 0 0 0.0056953 4 24874 66.073 25.805 1 1.2966 1.1281 0 304900000 133730000 171160000 26252 319 9913 10185 41094;41095;41096;41097 41095 NIVEAAAVR 9 0 1 Unmodified _NIVEAAAVR_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q75MH1;Q76N57 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 476.7758 2 471.771991 941.529429 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.419 1 52.419 51.919 52.919 0 0 0 0 0.042166 1 25931 49.097 12.702 1 26253 319 9913 10185 41098 41098 NIVEAAAVR 9 0 1 Unmodified _NIVEAAAVR_ 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q75MH1;Q76N57 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 476.7762 2 471.771991 941.529429 85413.52 0.031034 1.4641E-05 -0.53971 -0.00025462 -0.50868 -0.00023998 471.772154858949 476.775570504416 50.507 4.1716 50.507 50.004 54.176 0 1180 308 10 0 0 0 0.0055856 4 24023 66.351 26.083 1 1.3114 1.1455 0 236130000 108930000 127190000 26254 319 9913 10185 41099;41100;41101;41102 41099 NIVLYDMR 8 0 1 Oxidation (M) _NIVLYDM(ox)R_ NIVLYDM(1)R NIVLYDM(49.1)R 0 1 0 A0A087WT20;Q9NV06;A0A087X1F8 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.2701 2 520.265684 1038.51682 83284.76 0.62958 0.00032755 -0.18555 -9.6535E-05 0.44403 0.00023101 520.265769561525 525.269604741215 56.232 0.6954 56.232 55.915 56.611 -3.8147E-06 176 57 4 0 0 0 0.017114 1 31614 49.097 43.058 1 1.3435 1.3995 0 21216000 7425400 13791000 26255 402 9914 10186 41103 41103 292 NIVQHTTDSSLEEK 14 1 0 Unmodified _NIVQHTTDSSLEEK_ 0 0 0 Q9H501;A0JLU5;Q05C10;Q8IWH6 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.3962 2 800.894291 1599.77403 69881.08 0.65978 0.00052842 -0.054549 -4.3688E-05 0.60523 0.00048473 801.396102320996 804.901241966407 28.38 0.3093 28.38 28.23 28.54 0 73 21 5 0 0 0 1.3046E-37 2 13370 167.71 141.59 1 0.84097 0.82385 0 21703000 12378000 9325200 26256 2033 9915 10187 41104;41105 41105 NIVQHTTDSSLEEK 14 1 0 Unmodified _NIVQHTTDSSLEEK_ 0 0 0 Q9H501;A0JLU5;Q05C10;Q8IWH6 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.2653 3 534.265286 1599.77403 84364.41 0.36923 0.00019727 -0.22921 -0.00012246 0.14002 7.4808E-05 534.265074622194 536.936489269894 28.38 0.43826 28.38 28.23 28.669 1.9073E-06 114 28 5 0 0 0 0.0017439 2 13388 35.329 15.751 1 0.76095 0.77045 0 18257000 9956600 8300000 26257 2033 9915 10187 41106;41107 41107 NIVQHTTDSSLEEK 14 1 0 Unmodified _NIVQHTTDSSLEEK_ 0 0 0 Q9H501;A0JLU5;Q05C10;Q8IWH6 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.9019 2 800.894291 1599.77403 68283.59 0.40458 0.00032403 -0.3072 -0.00024604 0.097379 7.799E-05 801.395845264104 804.901443695489 27.457 0.28946 27.457 27.359 27.649 -1.9073E-06 63 14 9 0 0 0 8.6722E-85 2 12749 225.97 190.26 1 0.92811 0.9802 0 23663000 13114000 10549000 26258 2033 9915 10187 41108;41109 41108 NIVQHTTDSSLEEK 14 1 0 Unmodified _NIVQHTTDSSLEEK_ 0 0 0 Q9H501;A0JLU5;Q05C10;Q8IWH6 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.9371 3 534.265286 1599.77403 83318.23 0.2544 0.00013592 0.054475 2.9104E-05 0.30887 0.00016502 534.265242735221 536.936691754288 32.309 0.45512 32.309 32.161 32.616 0 96 21 8 0 0 0 0.00052222 2 13857 40.801 28.656 1 1.3693 1.0841 0 4956800 2198200 2758700 26259 2033 9915 10187 41110;41111 41110 NIVQHTTDSSLEEK 14 1 0 Unmodified _NIVQHTTDSSLEEK_ 0 0 0 Q9H501;A0JLU5;Q05C10;Q8IWH6 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 800.8951 2 800.894291 1599.77403 68188.7 0.35548 0.0002847 0.55223 0.00044228 0.90771 0.00072698 800.894612166116 804.901673556646 32.297 0.35242 32.297 32.161 32.513 0 80 16 6 0 0 0 0.01367 1 13862 35.737 19.105 1 1.5012 1.1897 0 4807300 1827100 2980200 26260 2033 9915 10187 41112 41112 NIVQHTTDSSLEEK 14 1 0 Unmodified _NIVQHTTDSSLEEK_ 0 0 0 Q9H501;A0JLU5;Q05C10;Q8IWH6 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 804.902 2 800.894291 1599.77403 68360.6 0.51803 0.00041488 -0.015487 -1.2404E-05 0.50254 0.00040248 800.894205507757 804.901505079607 32.392 0.52289 32.392 32.236 32.759 0 113 26 7 0 0 0 0.00023444 2 13411 64.439 47.807 1 1.3568 1.0619 0 3370500 1313900 2056600 26261 2033 9915 10187 41113;41114 41113 NIVQHTTDSSLEEK 14 1 0 Unmodified _NIVQHTTDSSLEEK_ 0 0 0 Q9H501;A0JLU5;Q05C10;Q8IWH6 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 534.2654 3 534.265286 1599.77403 83167.02 0.47818 0.00025548 -0.10658 -5.6939E-05 0.37161 0.00019854 534.265290293469 536.936651468152 32.378 0.47855 32.378 32.236 32.715 0 97 24 6 0 0 0 0.0087198 2 13447 22.538 11.433 1 1.5282 1.2406 0 2860000 1232200 1627800 26262 2033 9915 10187 41115;41116 41116 NIVSCDSNIGADK 13 1 0 Unmodified _NIVSCDSNIGADK_ 0 0 0 A8K124;B4DHL1;A0A024R5W1;Q6N043 A8K124 A8K124 SUHW4;ZNF280D Zinc finger protein 280D MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 700.8324 2 696.824823 1391.63509 74817.32 0.44156 0.00030769 0.63906 0.00044532 1.0806 0.000753 696.825277813428 700.832327227123 45.58 0.29552 45.58 45.435 45.731 0 81 21 5 0 0 0 0.0456 1 21827 30.205 30.205 1 2.3002 1.9355 0 1206800 307150 899640 26263 189 9916 10188 41117 41117 NIVSGLMEK 9 1 0 Oxidation (M) _NIVSGLM(ox)EK_ NIVSGLM(1)EK NIVSGLM(40.27)EK 0 1 0 REV__C9J2X2 REV__C9J2X2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.7715 2 503.765517 1005.51648 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.21 1 71.21 70.71 71.71 0 0 0 0 0.043492 1 42650 40.268 14.329 1 + 26264 2171 9917 10189 41118 41118 2012 NIVVDDITEQKPEPQDDGK 19 2 0 Unmodified _NIVVDDITEQKPEPQDDGK_ 0 0 1 Q9Y4W2;B3KUJ7 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.8509 3 714.018329 2139.03316 71598.23 0.57636 0.00041153 -0.37724 -0.00026936 0.19912 0.00014217 714.018068771939 719.69498616857 62.522 0.55736 62.522 62.376 62.934 0 195 50 6 0 0 0 0.038157 1 36800 23.683 23.683 1 1.3774 1.5829 0 23680000 9955200 13725000 26265 2146 9918 10190 41119 41119 NIYAFMGTPVQK 12 1 0 Oxidation (M) _NIYAFM(ox)GTPVQK_ NIYAFM(1)GTPVQK NIYAFM(87.3)GTPVQK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.8577 2 692.850113 1383.68567 72312.28 0.36068 0.0002499 -0.018015 -1.2482E-05 0.34267 0.00023742 692.849635923078 696.857287877905 69.69 0.94527 69.69 69.488 70.433 0 383 83 7 0 0 0 0.00011728 1 40479 87.298 87.298 1 3.1753 3.5897 0 104760000 24634000 80129000 26266 1569 9919 10191 41120 41120 1337 NIYAFMGTPVQK 12 1 0 Oxidation (M) _NIYAFM(ox)GTPVQK_ NIYAFM(1)GTPVQK NIYAFM(93.26)GTPVQK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.8582 2 692.850113 1383.68567 72767.03 0.74199 0.00051409 -0.1546 -0.00010712 0.58739 0.00040697 692.849518175119 696.857213544553 68.445 1.0384 68.445 68.243 69.282 -7.6294E-06 351 86 7 0 0 0 6.9397E-05 1 40638 93.258 93.258 1 3.3687 3.7691 0 84756000 19378000 65378000 26267 1569 9919 10191 41121 41121 1337 NIYAFMGTPVQK 12 1 0 Oxidation (M) _NIYAFM(ox)GTPVQK_ NIYAFM(1)GTPVQK NIYAFM(74.84)GTPVQK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.858 2 692.850113 1383.68567 72882.71 0.32688 0.00022648 0.30562 0.00021175 0.6325 0.00043823 692.850454096353 696.857426275635 79.99 0.82987 79.99 79.598 80.428 0 295 53 10 0 0 0 8.7558E-05 1 43113 74.841 74.841 1 3.4677 2.6913 0 14383000 3529700 10853000 26268 1569 9919 10191 41122 41122 1337 NIYAFMGTPVQK 12 1 0 Oxidation (M) _NIYAFM(ox)GTPVQK_ NIYAFM(1)GTPVQK NIYAFM(65.5)GTPVQK 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.8576 2 692.850113 1383.68567 74205.09 0.43768 0.00030325 -0.0134 -9.2839E-06 0.42428 0.00029397 692.850292499845 696.857232182152 80.22 0.84034 80.22 79.805 80.645 0 289 51 9 0 0 0 0.00039161 2 42469 65.5 65.5 1 3.2994 2.7258 0 11604000 2735400 8868800 26269 1569 9919 10191 41123;41124 41124 1337 NIYAFMGTPVQK 12 1 0 Unmodified _NIYAFMGTPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.8604 2 684.852655 1367.69076 73080.6 0.54285 0.00037177 -0.30414 -0.00020829 0.23872 0.00016349 684.852972602916 688.859660761786 103.03 0.62794 103.03 102.76 103.39 0 157 40 7 0 0 0 0.016226 1 58428 42.336 40.741 1 5.1933 4.1509 0 8986400 1433900 7552400 26270 1569 9919 10192 41125 41125 NIYAFMGTPVQK 12 1 0 Unmodified _NIYAFMGTPVQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.8602 2 684.852655 1367.69076 73510.32 0.38351 0.00026265 -0.039995 -2.739E-05 0.34352 0.00023526 684.853197435022 688.859728954098 102.85 0.65546 102.85 102.52 103.17 0 164 41 7 0 0 0 0.00022091 2 57520 83 83 1 4.8845 3.9957 0 8377000 1103900 7273200 26271 1569 9919 10192 41126;41127 41126 NIYSEELR 8 0 1 Unmodified _NIYSEELR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.259 2 512.258914 1022.50327 85957.16 0.38641 0.00019794 0.10647 5.4542E-05 0.49288 0.00025248 512.259035352295 517.262983318488 46.903 1.0386 46.903 46.471 47.509 0 423 94 6 0 0 0 0.0010071 1 25343 117.16 95.86 1 1.2398 1.4342 0 163640000 76314000 87330000 26272 1440 9920 10193 41128 41128 NIYSEELR 8 0 1 Unmodified _NIYSEELR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.2586 2 512.258914 1022.50327 84621 0.38576 0.00019761 -0.091208 -4.6722E-05 0.29455 0.00015089 512.258931512214 517.262911528443 45.765 0.81461 45.765 45.426 46.241 -3.8147E-06 317 69 6 0 0 0 0.0087497 1 25207 77.282 65.514 1 1.0889 1.2464 0 164350000 68549000 95799000 26273 1440 9920 10193 41129 41129 NIYSEELR 8 0 1 Unmodified _NIYSEELR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 512.2596 2 512.258914 1022.50327 83416.81 0.4903 0.00025116 -0.084527 -4.33E-05 0.40577 0.00020786 512.258800384483 517.262944981293 54.288 1.1001 54.288 53.934 55.035 0 302 79 7 0 0 0 0.035324 1 27034 49.097 39.581 1 1.472 1.2076 0 12298000 5164700 7133700 26274 1440 9920 10193 41130 41130 NIYSEELR 8 0 1 Unmodified _NIYSEELR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.2587 2 512.258914 1022.50327 85335.82 0.24186 0.0001239 0.097427 4.9908E-05 0.33929 0.0001738 512.258819966445 517.263052351633 54.714 1.0685 54.714 54.331 55.4 0 336 76 7 0 0 0 0.060096 1 26704 40.067 32.917 1 1.4368 1.1656 0 10181000 4100500 6080300 26275 1440 9920 10193 41131 41131 NIYVLQELDNPGAK 14 1 0 Unmodified _NIYVLQELDNPGAK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.415 2 787.414662 1572.81477 67758.16 0.93661 0.0007375 0.044638 3.5149E-05 0.98125 0.00077265 787.414584174765 791.421847870562 100.39 1.7207 100.39 99.871 101.59 0 696 136 10 0 0 0 1.7221E-29 4 61795 152.62 152.62 1 0.42136 0.48967 0 250870000 178790000 72087000 26276 82 9921 10194 41132;41133;41134;41135 41134 NIYVLQELDNPGAK 14 1 0 Unmodified _NIYVLQELDNPGAK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.4163 2 787.414662 1572.81477 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.64 1 101.64 101.14 102.14 0 0 0 0 0.00021877 1 62490 89.403 60.677 1 26277 82 9921 10194 41136 41136 NIYVLQELDNPGAK 14 1 0 Unmodified _NIYVLQELDNPGAK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.4219 2 787.414662 1572.81477 67726.5 0.78784 0.00062035 -0.059232 -4.664E-05 0.7286 0.00057371 787.414606504822 791.421567279943 99.584 1.4185 99.584 99.125 100.54 7.6294E-06 655 115 10 0 0 0 2.6755E-11 2 62546 125.22 125.22 1 0.40567 0.47489 0 304820000 217890000 86922000 26278 82 9921 10194 41137;41138 41138 NIYVLQELDNPGAK 14 1 0 Unmodified _NIYVLQELDNPGAK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.4232 2 787.414662 1572.81477 67244.67 0.94027 0.00074038 -0.051987 -4.0935E-05 0.88828 0.00069945 787.414551532468 791.421864018741 112.9 2.131 112.9 112.48 114.61 0 378 100 11 0 0 0 6.6957E-30 4 65624 159.09 159.09 1 0.31142 0.26876 0 103440000 77764000 25677000 26279 82 9921 10194 41139;41140;41141;41142 41140 NIYVLQELDNPGAK 14 1 0 Unmodified _NIYVLQELDNPGAK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.4227 2 787.414662 1572.81477 67797.38 0.72993 0.00057476 0.10739 8.4558E-05 0.83732 0.00065932 787.414551581046 791.421899175932 112.77 2.732 112.77 112.23 114.96 0 447 130 11 0 0 0 2.5676E-30 3 64608 161.62 161.62 1 0.30831 0.26225 0 80102000 61425000 18677000 26280 82 9921 10194 41143;41144;41145 41144 NKFDVDAADEK 11 2 0 Unmodified _NKFDVDAADEK_ 0 0 1 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3105 2 626.296224 1250.5779 74662.82 1.1455 0.00071744 0.97501 0.00061064 2.1205 0.0013281 626.2968561726 634.310851705795 25.493 0.25397 25.493 25.353 25.607 0 30 10 6 0 0 0 0.00013323 2 11091 103.08 75.829 1 1.869 2.1358 0 15172000 5366100 9806400 26281 903 9922 10195 41146;41147 41146 NKLEDELK 8 2 0 Unmodified _NKLEDELK_ 0 0 1 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.7831 2 494.769114 987.523675 84247.95 0.71153 0.00035204 -1.5766 -0.00078006 -0.86507 -0.00042801 494.768641270687 502.782284457322 28.622 0.46981 28.622 28.454 28.924 0 95 26 6 0 0 0 0.0051058 1 13555 125.16 37.979 1 1.2718 1.5013 0 70674000 30077000 40597000 26282 1945 9923 10196 41148 41148 NKLEDELK 8 2 0 Unmodified _NKLEDELK_ 0 0 1 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.7835 2 494.769114 987.523675 84421.79 -0.087415 -4.325E-05 0.098949 4.8957E-05 0.011534 5.7067E-06 494.768953050072 502.783221368946 27.57 0.41692 27.57 27.32 27.737 0 78 21 6 0 0 0 0.00010529 1 12816 142.04 54.792 1 1.0608 1.2282 0 49627000 23088000 26539000 26283 1945 9923 10196 41149 41149 NKLEDELK 8 2 0 Unmodified _NKLEDELK_ 0 0 1 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.7692 2 494.769114 987.523675 85959.33 0.046688 2.31E-05 -0.21567 -0.00010671 -0.16898 -8.3608E-05 494.769084889259 502.783086039045 32.282 0.78559 32.282 31.83 32.616 0 112 39 5 0 0 0 0.0053527 2 13855 119.07 28.698 1 1.9212 1.6368 0 23112000 7865800 15246000 26284 1945 9923 10196 41150;41151 41151 NKLEDELK 8 2 0 Unmodified _NKLEDELK_ 0 0 1 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 502.7828 2 494.769114 987.523675 83253.8 0.18045 8.928E-05 -0.47242 -0.00023374 -0.29197 -0.00014446 494.768918849344 502.783087459683 32.176 0.79205 32.176 31.967 32.759 0 125 28 8 0 0 0 0.0055218 1 13246 114.89 35.182 1 1.9168 1.6238 0 16975000 5552900 11422000 26285 1945 9923 10196 41152 41152 NKPGPNIESGNEDDDASFK 19 2 0 Unmodified _NKPGPNIESGNEDDDASFK_ 0 0 1 Q8N5A0;A0A087WUT6;O60841;A0JLR8;Q05CQ1 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.64 3 678.63974 2032.89739 NaN NaN NaN 0.095615 6.4888E-05 NaN NaN NaN NaN 37.192 0.24928 37.192 37.044 37.293 0 0 0 0 0.010837 1 18844 36.111 33.102 1 NaN NaN 0 4592700 4592700 0 26286 414 9924 10197 41153 41153 NKPGPNIESGNEDDDASFK 19 2 0 Unmodified _NKPGPNIESGNEDDDASFK_ 0 0 1 Q8N5A0;A0A087WUT6;O60841;A0JLR8;Q05CQ1 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.6401 3 678.63974 2032.89739 NaN NaN NaN 0.15647 0.00010619 NaN NaN NaN NaN 43.377 0.26958 43.377 43.187 43.457 0 0 0 0 0.013144 1 19904 22.231 18.328 1 NaN NaN 0 986280 986280 0 26287 414 9924 10197 41154 41154 NKPGPYSSVPPPSAPPPK 18 2 0 Unmodified _NKPGPYSSVPPPSAPPPK_ 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;Q96J17;S4R349 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.3257 3 606.324588 1815.95193 77821.97 0.38463 0.00023321 -0.088916 -5.3912E-05 0.29572 0.0001793 606.324223906567 611.667487617521 39.715 0.78431 39.715 39.404 40.189 0 359 66 8 0 0 0 0.0051455 2 20891 25.508 25.508 1 1.058 1.2544 0 27570000 12768000 14802000 26288 468 9925 10198 41155;41156 41156 NKPGPYSSVPPPSAPPPK 18 2 0 Unmodified _NKPGPYSSVPPPSAPPPK_ 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;Q96J17;S4R349 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.3243 3 606.324588 1815.95193 78032.46 0.41395 0.00025099 -0.035534 -2.1545E-05 0.37841 0.00022944 606.324395668029 612.001780704176 38.604 0.72829 38.604 38.255 38.984 0 320 62 7 0 0 0 2.9196E-05 4 20427 48.288 48.288 1 0.98767 1.1421 0 36707000 16520000 20186000 26289 468 9925 10198 41157;41158;41159;41160 41160 NKPGPYSSVPPPSAPPPK 18 2 0 Unmodified _NKPGPYSSVPPPSAPPPK_ 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;Q96J17;S4R349 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.0017 3 606.324588 1815.95193 77580.29 0.33564 0.0002035 0.24341 0.00014759 0.57905 0.00035109 606.659161162111 611.667468193233 46.09 0.85292 46.09 45.661 46.514 3.8147E-06 376 64 8 0 0 0 0.017441 2 22218 22.646 18.805 1 0.91068 0.78314 0 6635100 3445300 3189800 26290 468 9925 10198 41161;41162 41161 NKPGPYSSVPPPSAPPPK 18 2 0 Unmodified _NKPGPYSSVPPPSAPPPK_ 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;Q96J17;S4R349 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.6678 3 606.324588 1815.95193 77398.43 0.35776 0.00021692 0.027599 1.6734E-05 0.38536 0.00023365 606.324526605861 611.66737559128 46.123 0.96156 46.123 45.715 46.677 0 344 58 7 0 0 0 0.00048177 2 21634 37.687 30.959 1 0.93512 0.79622 0 5370100 2326500 3043600 26291 468 9925 10198 41163;41164 41164 NKPGPYSSVPPPSAPPPKK 19 3 0 Unmodified _NKPGPYSSVPPPSAPPPKK_ 0 0 2 B2RAU8;A0A0A0MRM9;Q14978;Q96J17;S4R349 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.0369 3 649.022909 1944.0469 75598.23 0.4529 0.00029395 -0.072555 -4.709E-05 0.38035 0.00024686 649.357367289847 657.037172803752 32.511 0.67986 32.511 32.161 32.841 0 154 33 6 0 0 0 0.059709 1 13959 20.251 20.251 1 0.96598 0.9047 0 3368400 1837100 1531300 26292 468 9926 10199 41165 41165 NKPIVNIDPQTAELNHLK 18 2 0 Unmodified _NKPIVNIDPQTAELNHLK_ 0 0 1 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.387 3 682.044373 2043.11129 73210.45 0.66404 0.0004529 0.16056 0.00010951 0.82459 0.00056241 682.044178661052 687.387573307739 75.674 0.938 75.674 75.142 76.08 0 472 78 8 0 0 0 1.4599E-30 3 44434 146.86 146.86 1 0.84225 0.99408 0 89118000 48163000 40954000 26293 1803 9927 10200 41166;41167;41168 41168 NKPIVNIDPQTAELNHLK 18 2 0 Unmodified _NKPIVNIDPQTAELNHLK_ 0 0 1 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.7225 3 682.044373 2043.11129 73404.81 0.60241 0.00041087 -0.25611 -0.00017468 0.34629 0.00023619 682.378564944819 687.38692894757 73.267 0.87639 73.267 72.913 73.789 0 478 73 9 0 0 0 2.1354E-06 2 43825 84.035 84.035 1 0.8773 1.0195 0 126620000 65976000 60640000 26294 1803 9927 10200 41169;41170 41169 NKPIVNIDPQTAELNHLK 18 2 0 Unmodified _NKPIVNIDPQTAELNHLK_ 0 0 1 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.0441 3 682.044373 2043.11129 73079.29 0.53959 0.00036803 -0.21915 -0.00014947 0.32044 0.00021856 682.378602094509 687.387080520427 85.533 0.8104 85.533 85.227 86.037 0 356 49 12 0 0 0 2.1597E-08 2 46749 95.205 95.205 1 1.6183 1.3689 0 92811000 36847000 55964000 26295 1803 9927 10200 41171;41172 41172 NKPIVNIDPQTAELNHLK 18 2 0 Unmodified _NKPIVNIDPQTAELNHLK_ 0 0 1 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.7209 3 682.044373 2043.11129 72407.43 0.64277 0.0004384 -0.015202 -1.0368E-05 0.62757 0.00042803 682.378659159413 687.387186691992 85.439 0.99725 85.439 85.13 86.127 0 373 60 12 0 0 0 2.2516E-05 2 45804 58.427 58.427 1 1.6047 1.3721 0 82500000 32268000 50233000 26296 1803 9927 10200 41173;41174 41173 NKPNMSDPEESRGNDELVK 19 2 1 Oxidation (M) _NKPNM(ox)SDPEESRGNDELVK_ NKPNM(1)SDPEESRGNDELVK NKPNM(94.28)SDPEESRGNDELVK 0 1 2 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.3503 3 725.670935 2173.99097 69635.26 0.45141 0.00032757 -0.15852 -0.00011503 0.29289 0.00021254 726.005204740502 734.349869658535 20.696 0.49892 20.696 20.534 21.033 0 138 21 11 0 0 0 7.0692E-09 2 7053 94.281 94.281 1 1.0131 1.2092 0 90845000 43193000 47652000 26297 908 9928 10201 41175;41176 41175 745 NKPNMSDPEESRGNDELVK 19 2 1 Oxidation (M) _NKPNM(ox)SDPEESRGNDELVK_ NKPNM(1)SDPEESRGNDELVK NKPNM(91.72)SDPEESRGNDELVK 0 1 2 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.6705 3 725.670935 2173.99097 70137.52 0.64604 0.00046881 -0.11351 -8.2371E-05 0.53253 0.00038644 725.670822224342 734.349983225284 20.398 0.40856 20.398 20.257 20.665 0 102 13 11 0 0 0 1.0197E-08 1 6685 91.725 91.725 1 1.0165 1.3111 0 137450000 67957000 69498000 26298 908 9928 10201 41177 41177 745 NKPQVPVPGSDISETQVER 19 1 1 Unmodified _NKPQVPVPGSDISETQVER_ 0 0 1 Q96BK5 Q96BK5 Q96BK5 PINX1 PIN2/TERF1-interacting telomerase inhibitor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.028 3 694.027159 2079.05965 NaN NaN NaN -1.3231 -0.00091829 NaN NaN NaN NaN 64.362 0.58436 64.362 64.065 64.649 7.6294E-06 0 0 0 4.244E-06 1 36911 57.366 48.083 1 NaN NaN 0 8914400 8914400 0 26299 1960 9929 10202 41178 41178 NKPQVPVPGSDISETQVER 19 1 1 Unmodified _NKPQVPVPGSDISETQVER_ 0 0 1 Q96BK5 Q96BK5 Q96BK5 PINX1 PIN2/TERF1-interacting telomerase inhibitor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.3612 3 694.027159 2079.05965 72798.38 0.48646 0.00033762 -0.14898 -0.00010339 0.33748 0.00023422 694.361887900271 700.034649844498 62.827 0.64635 62.827 62.501 63.148 3.8147E-06 196 57 6 0 0 0 8.8864E-06 1 36801 50.957 50.957 1 0.62868 0.71337 0 17459000 9508200 7951100 26300 1960 9929 10202 41179 41179 NKPQVPVPGSDISETQVER 19 1 1 Unmodified _NKPQVPVPGSDISETQVER_ 0 0 1 Q96BK5 Q96BK5 Q96BK5 PINX1 PIN2/TERF1-interacting telomerase inhibitor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.0272 3 694.027159 2079.05965 72385.05 0.45265 0.00031415 0.4004 0.00027789 0.85305 0.00059204 694.362391315071 700.034904942196 74.366 0.78346 74.366 73.984 74.767 -7.6294E-06 170 51 8 0 0 0 0.00025324 1 38617 27.61 27.61 1 0.74677 0.63465 0 3230000 1931300 1298700 26301 1960 9929 10202 41180 41180 NKYEDEINK 9 2 0 Unmodified _NKYEDEINK_ 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552;CON__H-INV:HIT000016045;B2R853;B4DRR0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;B4DL32;F8W0C6;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P05787;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647;H6VRG3;H6VRG2 H6VRG3 KRT8;KRT6C;KRT6A;KRT79;KRT5;KRT1 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.7938 2 576.78021 1151.54587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.303 1 19.303 18.803 19.803 0 0 0 0 1.7624E-52 1 5762 196.32 98.31 1 + 26302 1308;1309;1156;1162;859;1154;1175 9930 10203 41181 41181 NKYEDEINK 9 2 0 Unmodified _NKYEDEINK_ 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552;CON__H-INV:HIT000016045;B2R853;B4DRR0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;B4DL32;F8W0C6;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P05787;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647;H6VRG3;H6VRG2 H6VRG3 KRT8;KRT6C;KRT6A;KRT79;KRT5;KRT1 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.7944 2 576.78021 1151.54587 79849.57 0.064087 3.6964E-05 -0.74346 -0.00042881 -0.67938 -0.00039185 576.779758601846 584.79406570605 21.274 0.62183 21.274 21.031 21.653 -1.9073E-06 136 29 9 0 0 0 1.0841E-08 2 6314 150.35 104.67 1 0.37361 0.31632 0 77449000 57690000 19759000 + 26303 1308;1309;1156;1162;859;1154;1175 9930 10203 41182;41183 41183 NKYEDEINK 9 2 0 Unmodified _NKYEDEINK_ 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552;CON__H-INV:HIT000016045;B2R853;B4DRR0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;B4DL32;F8W0C6;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 CON__P05787;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647;H6VRG3;H6VRG2 H6VRG3 KRT8;KRT6C;KRT6A;KRT79;KRT5;KRT1 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.7932 2 576.78021 1151.54587 78759 0.01121 6.4658E-06 -0.13233 -7.6328E-05 -0.12112 -6.9862E-05 576.780162016444 584.794273653452 21.029 0.50332 21.029 20.833 21.336 -1.9073E-06 137 23 9 0 0 0 7.4089E-05 2 5720 123.6 87.039 1 0.34658 0.2944 0 27027000 20298000 6728600 + 26304 1308;1309;1156;1162;859;1154;1175 9930 10203 41184;41185 41184 NLAEIGK 7 1 0 Unmodified _NLAEIGK_ 0 0 0 B5BUA4;Q5FBB7;A0A024R2J4;F8WB17;E9RFS7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 372.7157 2 372.716153 743.417754 NaN NaN NaN 0.056409 2.1025E-05 NaN NaN NaN NaN 30.43 0.25436 30.43 30.307 30.562 0 0 0 0 0.048672 1 14887 58.981 8.0153 1 NaN NaN 0 6197000 6197000 0 26305 1075 9931 10204 41186 41186 NLAHPVIQNFSYETFQQK 18 1 0 Unmodified _NLAHPVIQNFSYETFQQK_ 0 0 0 Q15554;H3BR06;U3KQ35;H3BTA7;J3KSJ9 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.0386 3 722.032244 2163.0749 72922.61 0.59333 0.0004284 0.22463 0.00016219 0.81796 0.00059059 722.032728730145 725.037943923881 101.55 0.4325 101.55 101.34 101.77 0 129 27 7 0 0 0 0.0065084 1 57547 23.895 23.895 1 1.9123 1.5094 0 3067500 994550 2072900 26306 1762 9932 10205 41187 41187 NLAHPVIQNFSYETFQQK 18 1 0 Unmodified _NLAHPVIQNFSYETFQQK_ 0 0 0 Q15554;H3BR06;U3KQ35;H3BTA7;J3KSJ9 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.0379 3 722.032244 2163.0749 73051.81 0.59227 0.00042764 0.078818 5.6909E-05 0.67109 0.00048455 722.367091503702 725.037983117222 101.3 0.4267 101.3 101.07 101.49 0 131 25 8 0 0 0 0.0014527 1 56529 33.836 33.836 1 1.5345 1.2466 0 2900200 1165900 1734300 26307 1762 9932 10205 41188 41188 NLALCPANHAPLQEAAVIPR 20 0 1 Unmodified _NLALCPANHAPLQEAAVIPR_ 0 0 0 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495 A0A0S2Z487 A0A0S2Z487 JUP Junction plakoglobin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.0529 3 719.052874 2154.13679 NaN NaN NaN 0.20899 0.00015028 NaN NaN NaN NaN 92.562 0.32757 92.562 92.417 92.744 -7.6294E-06 0 0 0 0.0046126 1 57469 28.333 18.752 1 NaN NaN 0 6735400 6735400 0 26308 94 9933 10206 41189 41189 NLALCPANHAPLQEAAVIPR 20 0 1 Unmodified _NLALCPANHAPLQEAAVIPR_ 0 0 0 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495 A0A0S2Z487 A0A0S2Z487 JUP Junction plakoglobin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.0536 3 719.052874 2154.13679 NaN NaN NaN -0.35094 -0.00025235 NaN NaN NaN NaN 106.59 0.26323 106.59 106.45 106.72 0 0 0 0 0.012217 2 60037 21.803 12.273 1 NaN NaN 0 1343200 1343200 0 26309 94 9933 10206 41190;41191 41190 NLAMGVNLTSMSK 13 1 0 2 Oxidation (M) _NLAM(ox)GVNLTSM(ox)SK_ NLAM(1)GVNLTSM(1)SK NLAM(40.5)GVNLTSM(40.5)SK 0 2 0 Q6FI35;Q6FHF5;P12004;B4DUA2 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.8845 2 699.341794 1396.66904 70929.59 0.29666 0.00020747 0.67299 0.00047065 0.96965 0.00067812 699.843839104511 703.349805592986 52.94 0.46261 52.94 52.647 53.11 0 66 34 4 0 0 0 0.012349 1 29355 40.496 40.496 1 1.5075 1.5475 0 14454000 4064300 10390000 26310 1473 9934 10207 41192 41192 1216;1217 NLANTVTEEILEK 13 1 0 Unmodified _NLANTVTEEILEK_ 0 0 0 Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645;B7Z213 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.4017 2 737.393396 1472.77224 71716.51 0.74613 0.00055019 0.29846 0.00022008 1.0446 0.00077027 737.393422882446 741.400991138474 104.19 0.79031 104.19 103.87 104.67 0 300 65 6 0 0 0 8.4805E-07 4 64385 111.63 111.63 1 2.3122 2.2695 0 22959000 7377600 15582000 26311 864 9935 10208 41193;41194;41195;41196 41196 NLANTVTEEILEK 13 1 0 Unmodified _NLANTVTEEILEK_ 0 0 0 Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645;B7Z213 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.8959 2 737.393396 1472.77224 72095.4 0.40618 0.00029951 0.95541 0.00070451 1.3616 0.001004 737.394027051083 741.401411786196 103.39 0.67666 103.39 103.14 103.82 0 275 56 6 0 0 0 0.00013633 2 65336 81.017 81.017 1 2.3749 2.5718 0 38799000 11866000 26933000 26312 864 9935 10208 41197;41198 41198 NLANTVTEEILEK 13 1 0 Unmodified _NLANTVTEEILEK_ 0 0 0 Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645;B7Z213 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.3998 2 737.393396 1472.77224 71234.51 0.47085 0.0003472 0.16808 0.00012394 0.63893 0.00047115 737.393667095918 741.400491230505 116.55 0.63029 116.55 116.31 116.94 0 79 24 5 0 0 0 0.034531 1 68399 32.606 32.606 1 1.0826 0.85493 0 5273400 2877000 2396400 26313 864 9935 10208 41199 41199 NLATTVTEEILEK 13 1 0 Unmodified _NLATTVTEEILEK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;B4DMD1 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.8964 2 730.895771 1459.77699 69041.69 0.83295 0.0006088 0.62603 0.00045756 1.459 0.0010664 730.895574548959 734.902591698314 124.09 0.7182 124.09 123.81 124.53 0 118 29 7 0 0 0 0.0019262 2 74295 67.08 67.08 1 0.68257 0.54742 0 8227900 4741900 3486000 26314 855 9936 10209 41200;41201 41200 NLATTVTEEILEK 13 1 0 Unmodified _NLATTVTEEILEK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;B4DMD1 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.9014 2 730.895771 1459.77699 71375.52 0.77745 0.00056823 2.2634 0.0016543 3.0409 0.0022226 730.897075958395 734.905292033121 123.92 0.69138 123.92 123.66 124.35 0 107 26 7 0 0 0 0.036055 1 73232 39.917 39.917 1 0.83414 0.67677 0 13196000 7382000 5814300 26315 855 9936 10209 41202 41202 NLAVLCLGCCGLQNQDFAR 19 0 1 Unmodified _NLAVLCLGCCGLQNQDFAR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1110.0227 2 1105.01918 2208.02381 55751.46 0.3475 0.00038399 -0.49633 -0.00054845 -0.14883 -0.00016446 1105.5191454887 1110.02333840772 112.28 0.30965 112.28 112.13 112.44 0 106 21 7 0 0 0 7.9742E-06 2 70826 95.651 95.651 1 0.60104 0.61571 0 14460000 8526600 5933000 26316 1995;1289 9937 10210 41203;41204 41203 NLAVLCLGCCGLQNQDFAR 19 0 1 Unmodified _NLAVLCLGCCGLQNQDFAR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1105.5182 2 1105.01918 2208.02381 55979.61 0.36846 0.00040716 -0.58414 -0.00064549 -0.21568 -0.00023833 1105.51917252442 1110.02365866103 111.76 0.35812 111.76 111.56 111.92 -7.6294E-06 110 24 7 0 0 0 3.797E-05 1 72119 69.716 69.716 1 0.73741 0.7276 0 14838000 7137100 7700800 26317 1995;1289 9937 10210 41205 41205 NLAVLCLGCCGLQNQDFAR 19 0 1 Unmodified _NLAVLCLGCCGLQNQDFAR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1110.5248 2 1105.01918 2208.02381 56877.16 0.31162 0.00034435 -0.47582 -0.00052579 -0.1642 -0.00018144 1105.01945325873 1110.02365418148 123.36 0.49632 123.36 123.13 123.63 0 145 20 11 0 0 0 3.8601E-08 3 73652 121.24 121.24 1 1.3768 1.1537 0 25218000 10146000 15072000 26318 1995;1289 9937 10210 41206;41207;41208 41207 NLAVLCLGCCGLQNQDFAR 19 0 1 Unmodified _NLAVLCLGCCGLQNQDFAR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1105.0192 2 1105.01918 2208.02381 57291.84 0.34879 0.00038542 -0.98736 -0.0010911 -0.63857 -0.00070563 1105.52019113084 1110.02319694444 123.2 0.49701 123.2 122.99 123.49 -7.6294E-06 160 22 10 0 0 0 1.6063E-06 2 72656 108.71 108.71 1 1.3759 1.1837 0 21861000 8936500 12924000 26319 1995;1289 9937 10210 41209;41210 41210 NLDCPELISEFMK 13 1 0 Oxidation (M) _NLDCPELISEFM(ox)K_ NLDCPELISEFM(1)K NLDCPELISEFM(63.41)K 0 1 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.3793 2 806.373291 1610.73203 NaN NaN NaN 0.11487 9.2632E-05 NaN NaN NaN NaN 101.99 0.69135 101.99 101.55 102.24 -7.6294E-06 0 0 0 0.0012175 1 62516 63.408 38.617 1 NaN NaN 0 7928600 0 7928600 26320 1568 9938 10211 41211 41211 1326 NLDCPELISEFMK 13 1 0 Oxidation (M) _NLDCPELISEFM(ox)K_ NLDCPELISEFM(1)K NLDCPELISEFM(100.55)K 0 1 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.3816 2 806.373291 1610.73203 NaN NaN NaN -0.10081 -8.1287E-05 NaN NaN NaN NaN 102.43 0.66143 102.43 102.12 102.78 -7.6294E-06 0 0 0 2.1856E-06 2 63081 100.55 90.867 1 NaN NaN 0 10551000 0 10551000 26321 1568 9938 10211 41212;41213 41213 1326 NLDCPELISEFMK 13 1 0 Oxidation (M) _NLDCPELISEFM(ox)K_ NLDCPELISEFM(1)K NLDCPELISEFM(91.31)K 0 1 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.374 2 806.373291 1610.73203 67639.63 0.61077 0.00049251 0.43002 0.00034676 1.0408 0.00083927 806.37341723054 810.381262499709 101.2 0.64369 101.2 100.91 101.55 -7.6294E-06 231 50 7 0 0 0 5.5824E-05 2 63673 91.313 91.313 1 1.1238 1.1491 0 25723000 12488000 13235000 26322 1568 9938 10211 41214;41215 41215 1326 NLDCPELISEFMK 13 1 0 Oxidation (M) _NLDCPELISEFM(ox)K_ NLDCPELISEFM(1)K NLDCPELISEFM(129.84)K 0 1 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.3811 2 806.373291 1610.73203 69586.99 0.38933 0.00031394 -0.028345 -2.2857E-05 0.36098 0.00029109 806.373499670911 810.38102542082 101.84 0.66341 101.84 101.46 102.12 0 278 50 8 0 0 0 9.1971E-14 2 64150 129.84 126.54 1 1.2486 1.2627 0 26695000 11272000 15424000 26323 1568 9938 10211 41216;41217 41216 1326 NLDCPELISEFMK 13 1 0 Oxidation (M) _NLDCPELISEFM(ox)K_ NLDCPELISEFM(1)K NLDCPELISEFM(41.54)K 0 1 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 810.3809 2 806.373291 1610.73203 67712.98 0.66405 0.00053547 0.051715 4.1702E-05 0.71577 0.00057717 806.373457549192 810.381842758667 114.03 0.49317 114.03 113.72 114.22 -7.6294E-06 116 21 8 0 0 0 0.0051166 1 65544 41.54 41.54 1 0.73776 0.60202 0 6341500 3541000 2800500 26324 1568 9938 10211 41218 41218 1326 NLDCPELISEFMK 13 1 0 Oxidation (M) _NLDCPELISEFM(ox)K_ NLDCPELISEFM(1)K NLDCPELISEFM(51.22)K 0 1 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 810.3816 2 806.373291 1610.73203 68880.38 0.98943 0.00079785 -0.21967 -0.00017714 0.76976 0.00062071 806.373607231403 810.38009147272 130 0.58981 130 129.78 130.36 -1.5259E-05 107 22 8 0 0 0 0.0014831 1 77779 51.218 51.218 1 1.1019 0.9026 0 4954300 2281300 2673000 26325 1568 9938 10211 41219 41219 1326 NLDDGIDDER 10 0 1 Unmodified _NLDDGIDDER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YAP2 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.2587 2 581.254557 1160.49456 80428.08 0.60758 0.00035316 -0.40268 -0.00023406 0.2049 0.0001191 581.254623928653 586.25852373863 36.409 0.66621 36.409 36.033 36.699 0 160 61 4 0 0 0 0.0010088 2 18363 77.662 65.616 1 1.628 1.6759 0 19675000 7324300 12351000 26326 273 9939 10212 41220;41221 41220 NLDDGIDDER 10 0 1 Unmodified _NLDDGIDDER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YAP2 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.2584 2 581.254557 1160.49456 81264.06 1.3048 0.00075842 -0.44725 -0.00025996 0.85755 0.00049845 581.254509193619 586.258524617253 35.623 0.65668 35.623 35.242 35.899 -3.8147E-06 192 57 6 0 0 0 0.0010088 1 18131 77.662 65.616 1 1.7747 1.7947 0 19910000 7662400 12248000 26327 273 9939 10212 41222 41222 NLDDTIDDEK 10 1 0 Unmodified _NLDDTIDDEK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;P0CB38 B1ANR0 B1ANR0 PABPC4;PABPC4L Polyadenylate-binding protein;Polyadenylate-binding protein 4;Polyadenylate-binding protein 4-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.2751 2 589.26459 1176.51463 77500.35 0.95729 0.0005641 -0.090458 -5.3304E-05 0.86683 0.00051079 589.264168416819 593.271763609982 38.054 0.72927 38.054 37.683 38.412 0 268 61 6 0 0 0 0.0088882 1 19277 55.461 46.104 1 2.5515 2.7572 0 35285000 9749700 25535000 26328 818 9940 10213 41223 41223 NLDENGLDLLSK 12 1 0 Unmodified _NLDENGLDLLSK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.3556 2 665.846081 1329.67761 74453 0.84033 0.00055953 0.11222 7.4723E-05 0.95255 0.00063425 666.347931123894 670.355386186939 93.688 1.0169 93.688 93.255 94.271 7.6294E-06 442 90 8 0 0 0 0.003709 1 56815 55.353 37.917 1 1.587 1.7882 0 114980000 41650000 73333000 26329 25 9941 10214 41224 41224 NLDENGLDLLSK 12 1 0 Unmodified _NLDENGLDLLSK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.3554 2 665.846081 1329.67761 74300.76 0.71687 0.00047732 0.052644 3.5053E-05 0.76951 0.00051238 665.845719073615 670.355304674299 92.928 0.9798 92.928 92.487 93.467 0 360 83 7 0 0 0 0.00023551 1 57581 85.963 68.527 1 1.4773 1.6512 0 100210000 40418000 59795000 26330 25 9941 10214 41225 41225 NLDENGLDLLSK 12 1 0 Unmodified _NLDENGLDLLSK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.8535 2 665.846081 1329.67761 74637.34 0.67541 0.00044972 0.25313 0.00016854 0.92854 0.00061826 666.347957054849 669.853200655704 106.88 0.86842 106.88 106.44 107.31 -7.6294E-06 243 54 7 0 0 0 0.00032556 1 61077 72.652 55.216 1 1.3889 1.0972 0 18080000 8833400 9247000 26331 25 9941 10214 41226 41226 NLDENGLDLLSK 12 1 0 Unmodified _NLDENGLDLLSK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.8537 2 665.846081 1329.67761 74197.33 0.61891 0.0004121 0.39247 0.00026133 1.0114 0.00067342 665.845723075586 669.853250082949 106.7 0.88068 106.7 106.33 107.21 -7.6294E-06 248 55 6 0 0 0 0.00020446 1 60130 79.659 53.145 1 1.3881 1.1148 0 15001000 6216400 8784100 26332 25 9941 10214 41227 41227 NLDFQDVLDK 10 1 0 Unmodified _NLDFQDVLDK_ 0 0 0 Q9Y3I0;B4DNA0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.8044 2 603.803685 1205.59282 79068.75 0.86649 0.00052319 0.6395 0.00038613 1.506 0.00090932 603.803909294605 607.810977748679 98.451 0.98992 98.451 97.966 98.956 0 402 79 7 0 0 0 4.5895E-06 1 60175 109.29 109.29 1 1.2919 1.4547 0 73681000 32375000 41306000 26333 2137 9942 10215 41228 41228 NLDIERPTYTNLNR 14 0 2 Unmodified _NLDIERPTYTNLNR_ 0 0 1 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.3048 3 573.632192 1717.87475 79502.64 0.54411 0.00031212 -0.089281 -5.1214E-05 0.45483 0.0002609 573.632336212145 580.30442514392 65.442 1.6357 65.442 65.026 66.661 0 1002 145 12 0 0 0 8.5156E-05 4 37944 66.285 66.285 1 1.444 1.5842 0 944360000 386730000 557630000 26334 922;1257;1659;1869 9943 10216 41229;41230;41231;41232 41230 NLDIERPTYTNLNR 14 0 2 Unmodified _NLDIERPTYTNLNR_ 0 0 1 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.9534 2 859.94465 1717.87475 65328.03 0.70443 0.00060577 -0.15132 -0.00013012 0.55311 0.00047565 859.944489926966 869.95283461534 65.447 0.96535 65.447 65.127 66.092 0 566 88 10 0 0 0 0.00031019 1 37557 91.937 91.937 1 1.4602 1.5953 0 237790000 90023000 147760000 26335 922;1257;1659;1869 9943 10216 41233 41233 NLDIERPTYTNLNR 14 0 2 Unmodified _NLDIERPTYTNLNR_ 0 0 1 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.954 2 859.94465 1717.87475 64920.52 0.58103 0.00049965 -0.03419 -2.9401E-05 0.54684 0.00047025 859.944711165569 869.953074674885 63.926 0.95718 63.926 63.645 64.602 7.6294E-06 586 89 10 0 0 0 0.004623 2 37480 57.836 44.543 1 1.4211 1.7019 0 279040000 112480000 166560000 26336 922;1257;1659;1869 9943 10216 41234;41235 41234 NLDIERPTYTNLNR 14 0 2 Unmodified _NLDIERPTYTNLNR_ 0 0 1 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.6323 3 573.632192 1717.87475 79491.96 0.58561 0.00033592 -0.0013473 -7.7287E-07 0.58426 0.00033515 573.63247335548 580.304424450381 63.922 2.1397 63.922 63.196 65.336 0 1049 187 11 0 0 0 5.4544E-05 3 37520 66.285 60.381 1 1.4533 1.7992 0 1022000000 397940000 624040000 26337 922;1257;1659;1869 9943 10216 41236;41237;41238 41236 NLDIERPTYTNLNR 14 0 2 Unmodified _NLDIERPTYTNLNR_ 0 0 1 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.3054 3 573.632192 1717.87475 78562.33 0.53819 0.00030872 0.064526 3.7014E-05 0.60272 0.00034574 573.632258258996 580.304577443973 75.152 1.2632 75.152 74.815 76.078 0 580 89 11 0 0 0 0.018674 2 40161 27.649 23.477 1 1.1171 0.90404 0 51745000 25021000 26724000 26338 922;1257;1659;1869 9943 10216 41239;41240 41240 NLDIERPTYTNLNR 14 0 2 Unmodified _NLDIERPTYTNLNR_ 0 0 1 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;F8VVB9;C9JDS9;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.6326 3 573.632192 1717.87475 78309.75 0.33271 0.00019085 0.36001 0.00020651 0.69272 0.00039737 573.632426306409 580.304621424643 75.443 1.6444 75.443 74.746 76.391 0 622 112 10 0 0 0 0.0022791 2 39248 40.237 36.135 1 1.1241 1.0525 0 43931000 19812000 24119000 26339 922;1257;1659;1869 9943 10216 41241;41242 41241 NLDLAVLELMQSSVDNTK 18 1 0 Oxidation (M) _NLDLAVLELM(ox)QSSVDNTK_ NLDLAVLELM(1)QSSVDNTK NLDLAVLELM(54.52)QSSVDNTK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1007.5134 2 1003.50916 2005.00377 61129.07 0.32745 0.00032859 -0.21053 -0.00021127 0.11692 0.00011733 1003.50883642453 1007.51570413083 114.57 0.56821 114.57 114.27 114.84 0 136 39 5 0 0 0 2.9835E-05 1 72591 54.524 54.524 1 1.1646 1.215 0 11767000 4704200 7063000 26340 1665 9944 10217 41243 41243 1459 NLDLAVLELMQSSVDNTK 18 1 0 Oxidation (M) _NLDLAVLELM(ox)QSSVDNTK_ NLDLAVLELM(1)QSSVDNTK NLDLAVLELM(81.49)QSSVDNTK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1007.515 2 1003.50916 2005.00377 61272.05 0.4692 0.00047085 -0.26417 -0.00026509 0.20503 0.00020575 1004.01068686026 1007.51568151993 114.14 0.6203 114.14 113.76 114.38 0 190 45 6 0 0 0 3.8738E-06 2 74028 81.494 81.494 1 1.0191 1.0628 0 11001000 5174600 5826200 26341 1665 9944 10217 41244;41245 41244 1459 NLDLAVLELMQSSVDNTK 18 1 0 Oxidation (M) _NLDLAVLELM(ox)QSSVDNTK_ NLDLAVLELM(1)QSSVDNTK NLDLAVLELM(40.98)QSSVDNTK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1004.0132 2 1003.50916 2005.00377 61275 0.33785 0.00033903 0.09542 9.5755E-05 0.43327 0.00043479 1003.5091862343 1007.51685819553 125.81 0.74311 125.81 125.58 126.32 -7.6294E-06 116 34 7 0 0 0 0.00037546 1 74607 40.983 40.983 1 0.28066 0.22946 0 4771200 3338900 1432300 26342 1665 9944 10217 41246 41246 1459 NLDLDSIIAEVK 12 1 0 Unmodified _NLDLDSIIAEVK_ 0 0 0 CON__P35908;P35908;CON__O95678;O95678;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;H0YIN9;H6VRG2 CON__P35908;CON__O95678;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647;H6VRG2 H6VRG2 KRT2;KRT75;KRT6C;KRT6A;KRT79;KRT5;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.3674 2 665.36665 1328.71875 NaN NaN NaN -0.14862 -9.8887E-05 NaN NaN NaN NaN 122.38 1.4203 122.38 122.1 123.52 0 0 0 0 8.6024E-20 1 79181 132.55 109.5 1 NaN NaN 0 195330000 195330000 0 + 26343 1309;1166;1162;859;1154;1147;1175 9945 10218 41247 41247 NLDLDSIIAEVK 12 1 0 Unmodified _NLDLDSIIAEVK_ 0 0 0 CON__P35908;P35908;CON__O95678;O95678;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;H0YIN9;H6VRG2 CON__P35908;CON__O95678;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647;H6VRG2 H6VRG2 KRT2;KRT75;KRT6C;KRT6A;KRT79;KRT5;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.3667 2 665.36665 1328.71875 NaN NaN NaN -0.25727 -0.00017118 NaN NaN NaN NaN 121.97 1.3194 121.97 121.1 122.42 0 0 0 0 2.6673E-08 1 80795 110.66 83.333 1 NaN NaN 0 208450000 208450000 0 + 26344 1309;1166;1162;859;1154;1147;1175 9945 10218 41248 41248 NLDLDSIIAEVK 12 1 0 Unmodified _NLDLDSIIAEVK_ 0 0 0 CON__P35908;P35908;CON__O95678;O95678;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;H0YIN9;H6VRG2 CON__P35908;CON__O95678;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647;H6VRG2 H6VRG2 KRT2;KRT75;KRT6C;KRT6A;KRT79;KRT5;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.3674 2 665.36665 1328.71875 NaN NaN NaN -0.071192 -4.7369E-05 NaN NaN NaN NaN 134.49 0.4115 134.49 134.39 134.8 0 0 0 0 3.9248E-08 1 82138 107.06 70.66 1 NaN NaN 0 142090000 142090000 0 + 26345 1309;1166;1162;859;1154;1147;1175 9945 10218 41249 41249 NLDLDSIIAEVK 12 1 0 Unmodified _NLDLDSIIAEVK_ 0 0 0 CON__P35908;P35908;CON__O95678;O95678;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;H0YIN9;H6VRG2 CON__P35908;CON__O95678;B2R853;CON__P04259;CON__Q5XKE5;CON__P13647;H6VRG2 H6VRG2 KRT2;KRT75;KRT6C;KRT6A;KRT79;KRT5;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.3672 2 665.36665 1328.71875 NaN NaN NaN -0.313 -0.00020826 NaN NaN NaN NaN 134.43 0.46326 134.43 134.3 134.76 0 0 0 0 3.1922E-08 1 81164 109.16 91.72 1 NaN NaN 0 193680000 193680000 0 + 26346 1309;1166;1162;859;1154;1147;1175 9945 10218 41250 41250 NLDLSWSELK 10 1 0 Unmodified _NLDLSWSELK_ 0 0 0 G3V198;Q12769;E9PR16 G3V198 G3V198 NUP160 Nuclear pore complex protein Nup160 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.8148 2 602.814053 1203.61355 83157.27 0.71671 0.00043204 -0.12414 -7.4834E-05 0.59257 0.00035721 602.813955438196 606.820811577388 102.11 0.48716 102.11 101.92 102.41 0 88 36 4 0 0 0 0.028805 1 64516 43.282 43.282 1 0.87414 0.88353 0 8651700 4619400 4032300 26347 1271 9946 10219 41251 41251 NLDNAVLIGETGSGK 15 1 0 Unmodified _NLDNAVLIGETGSGK_ 0 0 0 B4DIS6;Q9H6R0 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.397 2 744.388645 1486.76274 70925.83 0.74647 0.00055567 0.05974 4.447E-05 0.80621 0.00060014 744.388578134166 748.395764821108 75.672 0.56854 75.672 75.418 75.986 -7.6294E-06 232 49 6 0 0 0 1.1211E-10 2 44399 122.39 115.73 1 1.3173 1.3328 0 27546000 11814000 15732000 26348 983 9947 10220 41252;41253 41252 NLDNAVLIGETGSGK 15 1 0 Unmodified _NLDNAVLIGETGSGK_ 0 0 0 B4DIS6;Q9H6R0 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.3956 2 744.388645 1486.76274 71330.12 0.7005 0.00052144 0.12204 9.0846E-05 0.82254 0.00061229 744.388820004043 748.39557002538 74.581 0.54939 74.581 74.291 74.841 0 217 48 6 0 0 0 3.3671E-10 2 44713 116.54 106.85 1 1.4074 1.5795 0 55320000 22074000 33246000 26349 983 9947 10220 41254;41255 41254 NLDNAVLIGETGSGK 15 1 0 Unmodified _NLDNAVLIGETGSGK_ 0 0 0 B4DIS6;Q9H6R0 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.3966 2 744.388645 1486.76274 71371.5 0.68684 0.00051127 -0.1242 -9.2456E-05 0.56263 0.00041882 744.388738009546 748.395736251282 86.203 0.6176 86.203 85.986 86.603 0 215 44 7 0 0 0 0.00022327 1 47202 68.809 62.964 1 1.3063 1.0454 0 7175600 3104500 4071100 26350 983 9947 10220 41256 41256 NLDNAVLIGETGSGK 15 1 0 Unmodified _NLDNAVLIGETGSGK_ 0 0 0 B4DIS6;Q9H6R0 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.3954 2 744.388645 1486.76274 71983.73 0.5986 0.00044559 -0.26073 -0.00019409 0.33787 0.00025151 744.3883526262 748.395676457761 86.31 0.6272 86.31 86.082 86.709 0 186 35 8 0 0 0 2.9031E-06 2 46459 98.337 86.769 1 1.4619 1.1929 0 6199000 2604300 3594700 26351 983 9947 10220 41257;41258 41257 NLEASAVIQGLVK 13 1 0 Unmodified _NLEASAVIQGLVK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3903 2 671.390459 1340.76637 75102.55 0.67434 0.00045274 -0.03073 -2.0632E-05 0.64361 0.00043211 671.390372873141 675.397431297804 108.12 0.6002 108.12 107.84 108.44 0 250 45 8 0 0 0 0.00015701 2 67344 86.189 86.189 1 0.94184 1.0118 0 39196000 18645000 20551000 26352 716 9948 10221 41259;41260 41260 NLEASAVIQGLVK 13 1 0 Unmodified _NLEASAVIQGLVK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3975 2 671.390459 1340.76637 73435.81 0.70896 0.00047599 -0.065222 -4.3789E-05 0.64374 0.0004322 671.390243096553 675.397607265089 107.46 1.2335 107.46 107.2 108.44 0 262 87 6 0 0 0 8.3339E-19 2 68524 143.4 143.4 1 0.90473 0.99232 0 41095000 19875000 21220000 26353 716 9948 10221 41261;41262 41261 NLEASAVIQGLVK 13 1 0 Unmodified _NLEASAVIQGLVK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.3912 2 671.390459 1340.76637 73805.76 0.80155 0.00053815 0.17101 0.00011482 0.97257 0.00065297 671.390598465784 675.397611619766 119.77 0.56145 119.77 119.53 120.09 -7.6294E-06 145 26 8 0 0 0 9.3779E-05 2 70911 93.096 93.096 1 1.2721 1.037 0 32050000 13789000 18261000 26354 716 9948 10221 41263;41264 41264 NLEASAVIQGLVK 13 1 0 Unmodified _NLEASAVIQGLVK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.391 2 671.390459 1340.76637 73935.02 0.65331 0.00043863 0.2933 0.00019692 0.94662 0.00063555 671.39064636402 675.397634280399 119.53 0.60001 119.53 119.32 119.92 7.6294E-06 135 27 7 0 0 0 1.7129E-13 2 69856 130.63 130.63 1 1.1545 0.95243 0 30379000 14430000 15948000 26355 716 9948 10221 41265;41266 41265 NLEAYAANPHSFVFTR 16 0 1 Unmodified _NLEAYAANPHSFVFTR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 918.9558 2 918.955017 1835.89548 63426.03 0.38724 0.00035585 -0.3984 -0.00036611 -0.011159 -1.0255E-05 918.954656441986 923.959256639003 88.412 0.90224 88.412 88.01 88.912 0 226 68 6 0 0 0 4.8375E-12 2 53128 115.63 115.63 1 0.54585 0.57884 0 41833000 27686000 14147000 26356 493 9949 10222 41267;41268 41267 NLEAYAANPHSFVFTR 16 0 1 Unmodified _NLEAYAANPHSFVFTR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.9705 3 612.972437 1835.89548 77635.66 0.44093 0.00027028 0.50432 0.00030914 0.94525 0.00057941 612.972389203512 616.308650012328 88.365 1.0496 88.365 87.941 88.99 -7.6294E-06 404 80 9 0 0 0 4.6688E-05 1 53164 56.121 56.121 1 1.0043 1.1093 0 55948000 26174000 29774000 26357 493 9949 10222 41269 41269 NLEAYAANPHSFVFTR 16 0 1 Unmodified _NLEAYAANPHSFVFTR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.3085 3 612.972437 1835.89548 77536.52 0.29816 0.00018277 0.21658 0.00013276 0.51475 0.00031553 613.306677671638 616.309095964772 87.127 0.86589 87.127 86.741 87.607 0 346 71 6 0 0 0 7.5316E-05 2 53596 60.209 60.209 1 0.69277 0.77816 0 45813000 24721000 21093000 26358 493 9949 10222 41270;41271 41271 NLEAYAANPHSFVFTR 16 0 1 Unmodified _NLEAYAANPHSFVFTR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.9519 2 918.955017 1835.89548 62960.92 0.42874 0.000394 -0.21576 -0.00019827 0.21298 0.00019572 918.954490166816 924.460782575753 87.203 0.76984 87.203 86.784 87.554 0 232 64 5 0 0 0 0.00015342 2 53948 74.987 74.987 1 0.71827 0.78479 0 37173000 18559000 18614000 26359 493 9949 10222 41272;41273 41273 NLEAYAANPHSFVFTR 16 0 1 Unmodified _NLEAYAANPHSFVFTR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.9539 2 918.955017 1835.89548 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.77 1 86.77 86.27 87.27 0 0 0 0 0.0010543 1 53487 84.468 62.27 1 26360 493 9949 10222 41274 41274 NLEAYAANPHSFVFTR 16 0 1 Unmodified _NLEAYAANPHSFVFTR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 923.958 2 918.955017 1835.89548 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.803 1 86.803 86.303 87.303 0 0 0 0 3.0096E-12 1 53511 116.51 84.668 1 26361 493 9949 10222 41275 41275 NLEAYAANPHSFVFTR 16 0 1 Unmodified _NLEAYAANPHSFVFTR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 923.9615 2 918.955017 1835.89548 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.289 1 87.289 86.789 87.789 0 0 0 0 0.00097123 1 53788 66.674 42.997 1 26362 493 9949 10222 41276 41276 NLEAYAANPHSFVFTR 16 0 1 Unmodified _NLEAYAANPHSFVFTR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.973 3 612.972437 1835.89548 78768.48 0.22934 0.00014058 0.33616 0.00020606 0.5655 0.00034664 612.972505207866 616.308784243908 100.82 1.2252 100.82 100.53 101.76 0 475 82 9 0 0 0 2.1144E-05 2 56991 71.601 71.601 1 1.2036 0.99176 0 18355000 7048300 11306000 26363 493 9949 10222 41277;41278 41278 NLEAYAANPHSFVFTR 16 0 1 Unmodified _NLEAYAANPHSFVFTR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 919.4567 2 918.955017 1835.89548 63741.06 0.35876 0.00032968 -0.13179 -0.00012111 0.22697 0.00020858 919.456263571499 923.959139161015 100.83 1.2483 100.83 100.47 101.72 0 468 85 8 0 0 0 2.3208E-05 2 57024 85.837 85.837 1 1.2322 1.0283 0 23264000 10433000 12831000 26364 493 9949 10222 41279;41280 41279 NLEAYAANPHSFVFTR 16 0 1 Unmodified _NLEAYAANPHSFVFTR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 923.9578 2 918.955017 1835.89548 63157.7 0.32134 0.0002953 -0.24394 -0.00022417 0.077398 7.1126E-05 919.456111086075 923.958968949988 100.64 1.0615 100.64 100.32 101.38 0 434 73 8 0 0 0 0.0001523 2 55975 72.891 72.891 1 1.1777 1.0268 0 25288000 11625000 13663000 26365 493 9949 10222 41281;41282 41281 NLEAYAANPHSFVFTR 16 0 1 Unmodified _NLEAYAANPHSFVFTR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.9721 3 612.972437 1835.89548 78223.71 0.37136 0.00022763 0.13687 8.3899E-05 0.50823 0.00031153 613.306739735675 616.308592190967 100.64 1.2494 100.64 100.35 101.6 0 461 84 9 0 0 0 2.7089E-05 2 56022 72.819 72.819 1 1.2666 1.0777 0 19402000 8138100 11263000 26366 493 9949 10222 41283;41284 41284 NLEAYGLDPYSVAAILQQR 19 0 1 Unmodified _NLEAYGLDPYSVAAILQQR_ 0 0 0 Q6ZP26;P41214 Q6ZP26 Q6ZP26 EIF2D Eukaryotic translation initiation factor 2D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1066.0541 2 1061.05239 2120.09022 60797.57 0.77744 0.00082491 -0.57717 -0.00061241 0.20027 0.0002125 1061.55270402966 1066.05617271993 130.41 0.3811 130.41 130.29 130.67 0 35 25 4 0 0 0 1.8031E-05 1 85036 63.76 63.76 1 3.1667 3.4159 0 2770600 723210 2047400 26367 1560 9950 10223 41285 41285 NLEAYGLDPYSVAAILQQR 19 0 1 Unmodified _NLEAYGLDPYSVAAILQQR_ 0 0 0 Q6ZP26;P41214 Q6ZP26 Q6ZP26 EIF2D Eukaryotic translation initiation factor 2D ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1066.0586 2 1061.05239 2120.09022 NaN NaN NaN -0.035872 -3.8062E-05 NaN NaN NaN NaN 130.1 0.40991 130.1 129.93 130.34 0 0 0 0 0.00018155 1 86888 62.14 51.53 1 NaN NaN 0 2909500 0 2909500 26368 1560 9950 10223 41286 41286 NLEDDTLSECK 11 1 0 Unmodified _NLEDDTLSECK_ 0 0 0 Q14966;D6W5H1;A8K583;B4E187;A0A096LPH6;B4DF54;A0A096LPI0 Q14966 Q14966 ZNF638 Zinc finger protein 638 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.29 2 662.290282 1322.56601 75897.68 1.0687 0.00070776 -0.19266 -0.0001276 0.87599 0.00058016 662.290180574291 666.297269498022 41.35 0.24806 41.35 41.24 41.488 -3.8147E-06 62 20 4 0 0 0 0.0005685 1 21780 74.162 69.255 1 0.76122 0.76105 0 7745600 2647800 5097800 26369 1746 9951 10224 41287 41287 NLEEAELHSTEK 12 1 0 Unmodified _NLEEAELHSTEK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.3458 2 700.33862 1398.66269 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.364 1 28.364 27.864 28.864 -1.9073E-06 0 0 0 0.00070748 1 13371 76.927 53.608 1 26370 873 9952 10225 41288 41288 NLEEAELHSTEK 12 1 0 Unmodified _NLEEAELHSTEK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.3397 2 700.33862 1398.66269 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.611 1 27.611 27.111 28.111 -1.9073E-06 0 0 0 5.399E-05 1 12886 92.611 62.444 1 26371 873 9952 10225 41289 41289 NLEEAELHSTEK 12 1 0 Unmodified _NLEEAELHSTEK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.3455 2 700.33862 1398.66269 NaN NaN NaN 0.055045 3.855E-05 NaN NaN NaN NaN 32.379 0.28486 32.379 32.248 32.532 0 0 0 0 0.010325 1 13950 54.784 35.022 1 NaN NaN 0 1722600 0 1722600 26372 873 9952 10225 41290 41290 NLEEAELHSTEK 12 1 0 Unmodified _NLEEAELHSTEK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.3463 2 700.33862 1398.66269 73172.09 0.52751 0.00036944 0.38489 0.00026955 0.9124 0.00063899 700.338987902534 704.34581866778 32.456 0.25163 32.456 32.345 32.596 0 67 12 8 0 0 0 0.001117 1 13514 61.958 36.572 1 2.0526 1.6637 0 2728900 797220 1931700 26373 873 9952 10225 41291 41291 NLEENYCR 8 0 1 Unmodified _NLEENYCR_ 0 0 0 CON__P06868;A0A0F7G8J1 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.2379 2 549.237655 1096.46076 NaN NaN NaN 0.17681 9.7109E-05 NaN NaN NaN NaN 24.878 0.38097 24.878 24.689 25.07 0 0 0 0 1.1146E-08 1 10565 139.31 56.928 1 NaN NaN 0 14180000 14180000 0 + 26374 1157 9953 10226 41292 41292 NLEENYCR 8 0 1 Unmodified _NLEENYCR_ 0 0 0 CON__P06868;A0A0F7G8J1 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.2379 2 549.237655 1096.46076 NaN NaN NaN -0.055374 -3.0413E-05 NaN NaN NaN NaN 24.624 0.37921 24.624 24.478 24.857 1.9073E-06 0 0 0 0.00155 1 10352 111.82 46.013 1 NaN NaN 0 11892000 11892000 0 + 26375 1157 9953 10226 41293 41293 NLEENYCR 8 0 1 Unmodified _NLEENYCR_ 0 0 0 CON__P06868;A0A0F7G8J1 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.2381 2 549.237655 1096.46076 NaN NaN NaN -0.092578 -5.0847E-05 NaN NaN NaN NaN 27.921 0.66488 27.921 27.673 28.338 1.9073E-06 0 0 0 0.0010794 1 10978 113.89 51.172 1 NaN NaN 0 7737500 7737500 0 + 26376 1157 9953 10226 41294 41294 NLENELELTK 10 1 0 Unmodified _NLENELELTK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.8171 2 601.816793 1201.61903 79118.14 0.73233 0.00044073 0.18532 0.00011153 0.91765 0.00055226 601.816511129325 605.824295551081 75.725 0.46283 75.725 75.523 75.986 0 135 40 4 0 0 0 0.00037039 1 44588 88.495 65.142 1 0.90792 0.92125 0 18152000 8564800 9587000 26377 1581 9954 10227 41295 41295 NLEPALPGR 9 0 1 Unmodified _NLEPALPGR_ 0 0 0 B3KWX6;Q53EY5;B3KX14;Q15014;Q5JXX6;Q5JXX1;Q5JXX2;B4DXQ8 B3KWX6 B3KWX6 MORF4L2 Mortality factor 4-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.7719 2 483.771991 965.529429 88149.86 0.37507 0.00018145 -0.32287 -0.0001562 0.052199 2.5253E-05 483.77183317565 488.7757015425 65.761 0.57617 65.761 65.53 66.107 0 147 42 5 0 0 0 0.037915 1 34122 42.869 31.8 1 0.39179 0.33723 0 2675100 1888700 786340 26378 950 9955 10228 41296 41296 NLEPALPGR 9 0 1 Unmodified _NLEPALPGR_ 0 0 0 B3KWX6;Q53EY5;B3KX14;Q15014;Q5JXX6;Q5JXX1;Q5JXX2;B4DXQ8 B3KWX6 B3KWX6 MORF4L2 Mortality factor 4-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.7718 2 483.771991 965.529429 88359.69 0.18677 9.0356E-05 -0.29362 -0.00014204 -0.10684 -5.1688E-05 483.771836298213 488.77571633044 66.244 0.58696 66.244 65.952 66.539 0 125 41 5 0 0 0 0.045082 1 33510 40.002 30.015 1 0.39868 0.35408 0 2379100 1708700 670350 26379 950 9955 10228 41297 41297 NLEPGLR 7 0 1 Unmodified _NLEPGLR_ 0 0 0 Q5T280;Q9P041 Q5T280 Q5T280 C9orf114 Putative methyltransferase C9orf114 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.7274 2 399.727052 797.439552 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.665 1 35.665 35.165 36.165 -3.8147E-06 0 0 0 0.015224 1 17976 81.297 36.686 1 26380 1819 9956 10229 41298 41298 NLEPGLR 7 0 1 Unmodified _NLEPGLR_ 0 0 0 Q5T280;Q9P041 Q5T280 Q5T280 C9orf114 Putative methyltransferase C9orf114 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 399.7271 2 399.727052 797.439552 NaN NaN NaN -0.13833 -5.5293E-05 NaN NaN NaN NaN 34.938 0.38382 34.938 34.723 35.107 0 0 0 0 0.032104 1 17680 74.423 29.812 1 NaN NaN 0 5117300 5117300 0 26381 1819 9956 10229 41299 41299 NLEVGIR 7 0 1 Unmodified _NLEVGIR_ 0 0 0 Q9UNZ5 Q9UNZ5 Q9UNZ5 C19orf53 Leydig cell tumor 10 kDa protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.739 2 400.734877 799.455202 95535.76 0.19931 7.9872E-05 0.23443 9.3945E-05 0.43375 0.00017382 400.734918836966 405.738934990196 48.557 0.85323 48.557 48.189 49.042 0 255 67 5 0 0 0 0.033843 1 26367 63.301 9.7472 1 0.80132 0.88993 0 71251000 39609000 31642000 26382 2116 9957 10230 41300 41300 NLEVGIR 7 0 1 Unmodified _NLEVGIR_ 0 0 0 Q9UNZ5 Q9UNZ5 Q9UNZ5 C19orf53 Leydig cell tumor 10 kDa protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.7349 2 400.734877 799.455202 94811.02 0.26286 0.00010534 0.22079 8.8477E-05 0.48365 0.00019381 400.734892800711 405.738980975048 47.475 0.95452 47.475 47.099 48.054 0 214 68 5 0 0 0 0.013364 1 26262 103.02 31.876 1 0.80643 0.91736 0 116640000 62259000 54386000 26383 2116 9957 10230 41301 41301 NLEVGIR 7 0 1 Unmodified _NLEVGIR_ 0 0 0 Q9UNZ5 Q9UNZ5 Q9UNZ5 C19orf53 Leydig cell tumor 10 kDa protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 405.7388 2 400.734877 799.455202 95312 -0.13076 -5.24E-05 0.31394 0.00012581 0.18318 7.3407E-05 400.734940817095 405.738955553369 55.596 0.91193 55.596 55.228 56.14 0 164 55 5 0 0 0 0.058932 1 27242 50.966 9.4637 1 0.53354 0.45272 0 4643500 2845900 1797700 26384 2116 9957 10230 41302 41302 NLFELAR 7 0 1 Unmodified _NLFELAR_ 0 0 0 A0A024R705;Q9UN37;I3L4J1;Q9NXK5;Q9UF30 A0A024R705 A0A024R705 VPS4A;DKFZp434E0418 Vacuolar protein sorting-associated protein 4A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.7469 2 431.742702 861.470852 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.813 1 81.813 81.313 82.313 -7.6294E-06 0 0 0 0.036586 1 48798 70.912 8.1982 1 26385 213 9958 10231 41303 41303 NLFEQLVR 8 0 1 Unmodified _NLFEQLVR_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8VWY4;F8VWX0;F8W0L1;F8VZ66;F8VV47;F8VVE5;F8VUW9;F8VV39;F8VS54;Q9BZ74;F8VVY0;F8VXH1 B2RE34 B2RE34 RACGAP1;FKSG42 Rac GTPase-activating protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.7884 2 509.787641 1017.56073 86868.87 0.32135 0.00016382 0.056049 2.8573E-05 0.3774 0.00019239 509.787608145022 514.791717169378 99.565 0.79886 99.565 99.16 99.958 0 234 66 6 0 0 0 0.028561 2 60781 53.166 18.359 1 0.87111 0.90768 0 21635000 11095000 10539000 26386 68 9959 10232 41304;41305 41304 NLFEQLVR 8 0 1 Unmodified _NLFEQLVR_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8VWY4;F8VWX0;F8W0L1;F8VZ66;F8VV47;F8VVE5;F8VUW9;F8VV39;F8VS54;Q9BZ74;F8VVY0;F8VXH1 B2RE34 B2RE34 RACGAP1;FKSG42 Rac GTPase-activating protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.7917 2 509.787641 1017.56073 86916.24 0.63268 0.00032253 -0.17344 -8.8419E-05 0.45923 0.00023411 509.787540134046 514.791598275489 98.518 0.8926 98.518 98.16 99.052 0 287 76 6 0 0 0 0.0080668 2 61725 80.229 25.326 1 1.0176 1.0944 0 25666000 12379000 13287000 26387 68 9959 10232 41306;41307 41307 NLFEQLVR 8 0 1 Unmodified _NLFEQLVR_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8VWY4;F8VWX0;F8W0L1;F8VZ66;F8VV47;F8VVE5;F8VUW9;F8VV39;F8VS54;Q9BZ74;F8VVY0;F8VXH1 B2RE34 B2RE34 RACGAP1;FKSG42 Rac GTPase-activating protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.7925 2 509.787641 1017.56073 86056.71 0.76809 0.00039156 0.61482 0.00031343 1.3829 0.00070499 509.78740021018 514.791477710391 112.3 0.67841 112.3 112 112.68 0 151 38 6 0 0 0 0.036793 1 65087 48.561 5.4377 1 1.5127 1.2723 0 4452800 1649000 2803800 26388 68 9959 10232 41308 41308 NLFIQQIK 8 1 0 Unmodified _NLFIQQIK_ 0 0 0 A0A0A0MRJ2;Q5VTZ4;P18847;Q59GS7 A0A0A0MRJ2 A0A0A0MRJ2 ATF3 Cyclic AMP-dependent transcription factor ATF-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.3076 2 502.300384 1002.58622 NaN NaN NaN -0.86965 -0.00043683 NaN NaN NaN NaN 80.233 0.72217 80.233 79.911 80.633 0 0 0 0 0.0079089 1 47677 81.297 23.833 1 NaN NaN 0 12966000 0 12966000 26389 466 9960 10233 41309 41309 NLFIQQIK 8 1 0 Unmodified _NLFIQQIK_ 0 0 0 A0A0A0MRJ2;Q5VTZ4;P18847;Q59GS7 A0A0A0MRJ2 A0A0A0MRJ2 ATF3 Cyclic AMP-dependent transcription factor ATF-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.3008 2 502.300384 1002.58622 86007.89 0.39434 0.00019808 0.48615 0.00024419 0.8805 0.00044227 502.3006336851 506.307693619573 78.958 0.75719 78.958 78.663 79.42 7.6294E-06 265 66 6 0 0 0 0.016916 1 47833 60.788 9.2155 1 0.72367 0.79789 0 43605000 26860000 16745000 26390 466 9960 10233 41310 41310 NLFIQQIK 8 1 0 Unmodified _NLFIQQIK_ 0 0 0 A0A0A0MRJ2;Q5VTZ4;P18847;Q59GS7 A0A0A0MRJ2 A0A0A0MRJ2 ATF3 Cyclic AMP-dependent transcription factor ATF-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.3073 2 502.300384 1002.58622 85777.02 0.47392 0.00023805 -0.059297 -2.9785E-05 0.41462 0.00020826 502.300366476545 506.307771151458 91.431 1.1198 91.431 91.112 92.231 -7.6294E-06 234 75 6 0 0 0 0.032434 2 50804 50.632 22.699 1 1.3429 1.0587 0 4057900 1589600 2468300 26391 466 9960 10233 41311;41312 41312 NLFIQQIK 8 1 0 Unmodified _NLFIQQIK_ 0 0 0 A0A0A0MRJ2;Q5VTZ4;P18847;Q59GS7 A0A0A0MRJ2 A0A0A0MRJ2 ATF3 Cyclic AMP-dependent transcription factor ATF-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.3073 2 502.300384 1002.58622 85930.76 0.21921 0.00011011 -0.21185 -0.00010641 0.007359 3.6964E-06 502.300357609597 506.307500757304 91.281 0.79003 91.281 90.95 91.74 0 227 54 6 0 0 0 0.030669 2 49784 51.787 30.016 1 1.4423 1.1262 0 3663600 1291800 2371800 26392 466 9960 10233 41313;41314 41313 NLGFGMGIEFR 11 0 1 Oxidation (M) _NLGFGM(ox)GIEFR_ NLGFGM(1)GIEFR NLGFGM(70.4)GIEFR 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.8088 2 628.808248 1255.60194 74599.01 0.9719 0.00061114 -0.19184 -0.00012063 0.78005 0.0004905 628.808081923085 633.812299177644 96.487 1.1801 96.487 96.097 97.277 0 469 103 7 0 0 0 0.00051355 2 58734 70.399 70.399 1 1.1291 1.3176 0 196210000 93559000 102650000 26393 2148 9961 10234 41315;41316 41316 1998 NLGFGMGIEFR 11 0 1 Oxidation (M) _NLGFGM(ox)GIEFR_ NLGFGM(1)GIEFR NLGFGM(70.03)GIEFR 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.8083 2 628.808248 1255.60194 75012.81 1.0148 0.0006381 -0.6175 -0.00038829 0.39727 0.00024981 628.80788830294 633.812024802965 95.916 1.3997 95.916 95.263 96.663 0 550 119 7 0 0 0 0.00053698 2 59521 70.028 70.028 1 1.0662 1.221 0 167620000 76125000 91499000 26394 2148 9961 10234 41317;41318 41318 1998 NLGFGMGIEFR 11 0 1 Oxidation (M) _NLGFGM(ox)GIEFR_ NLGFGM(1)GIEFR NLGFGM(56.55)GIEFR 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.8134 2 628.808248 1255.60194 76140.17 0.65245 0.00041026 -0.51992 -0.00032693 0.13253 8.3336E-05 628.80801118358 633.812403412828 109.58 0.7862 109.58 109.3 110.09 0 203 37 8 0 0 0 0.0025446 2 63041 56.548 52.388 1 0.60724 0.49813 0 16983000 10842000 6140400 26395 2148 9961 10234 41319;41320 41319 1998 NLGFGMGIEFR 11 0 1 Oxidation (M) _NLGFGM(ox)GIEFR_ NLGFGM(1)GIEFR NLGFGM(48.44)GIEFR 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.8091 2 628.808248 1255.60194 80045.95 0.76679 0.00048217 0.22738 0.00014298 0.99417 0.00062514 628.808312884115 633.81238543116 122.06 0.49048 122.06 121.79 122.28 0 92 23 5 0 0 0 0.0054741 2 72696 48.44 48.44 1 1.0851 0.91328 0 4534900 2283100 2251800 26396 2148 9961 10234 41321;41322 41322 1998 NLGFGMGIEFR 11 0 1 Oxidation (M) _NLGFGM(ox)GIEFR_ NLGFGM(1)GIEFR NLGFGM(58.7)GIEFR 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 629.3091 2 628.808248 1255.60194 74851.85 0.73888 0.00046461 -0.55308 -0.00034778 0.1858 0.00011683 628.808014308701 633.812366394814 109.45 0.88046 109.45 109.1 109.98 -7.6294E-06 186 41 8 0 0 0 0.0019668 1 62026 58.699 58.699 1 0.57316 0.48254 0 17405000 11233000 6171100 26397 2148 9961 10234 41323 41323 1998 NLGFGMGIEFR 11 0 1 Oxidation (M) _NLGFGM(ox)GIEFR_ NLGFGM(1)GIEFR NLGFGM(52.58)GIEFR 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.8089 2 628.808248 1255.60194 81455.34 0.86746 0.00054546 -0.061591 -3.8729E-05 0.80587 0.00050674 628.808385386491 633.812294004142 121.8 0.49735 121.8 121.55 122.04 0 101 23 6 0 0 0 0.0036105 1 71583 52.579 52.579 1 0.9152 0.80922 0 3928700 2617100 1311700 26398 2148 9961 10234 41324 41324 1998 NLGFGMGIEFR 11 0 1 Unmodified _NLGFGMGIEFR_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.8157 2 620.81079 1239.60703 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.9 1 110.9 110.4 111.4 0 0 0 0 0.00084637 1 69720 70.056 46.101 1 26399 2148 9961 10235 41325 41325 NLGFGMGIEFR 11 0 1 Unmodified _NLGFGMGIEFR_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.8113 2 620.81079 1239.60703 78519.03 0.41627 0.00025842 0.19068 0.00011838 0.60695 0.0003768 620.810977345742 625.814959411512 110.22 0.42268 110.22 110.06 110.48 0 95 27 6 0 0 0 0.00046797 1 70880 76.143 69.83 1 0.49744 0.48815 0 14046000 8739900 5305800 26400 2148 9961 10235 41326 41326 NLGFGMGIEFR 11 0 1 Unmodified _NLGFGMGIEFR_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.8162 2 620.81079 1239.60703 76939.83 0.76513 0.000475 0.50397 0.00031287 1.2691 0.00078787 620.811029900227 625.815074014584 122.03 0.60783 122.03 121.73 122.33 0 140 29 7 0 0 0 0.05005 1 72612 34.692 34.692 1 1.0862 0.90819 0 10333000 4402600 5930400 26401 2148 9961 10235 41327 41327 NLGFGMGIEFR 11 0 1 Unmodified _NLGFGMGIEFR_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.8148 2 620.81079 1239.60703 77596.34 0.79242 0.00049194 0.51036 0.00031684 1.3028 0.00080878 620.811117433024 625.815020594924 121.81 0.64534 121.81 121.53 122.17 -7.6294E-06 149 31 7 0 0 0 0.023921 1 71543 42.001 40.212 1 0.97355 0.79495 0 9320300 5048200 4272100 26402 2148 9961 10235 41328 41328 NLGFSPGDREENIR 14 0 2 Unmodified _NLGFSPGDREENIR_ 0 0 1 Q5TB52;B4DWB5;O95340 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.2719 3 535.265621 1602.77503 84355.02 0.5119 0.000274 -0.48724 -0.0002608 0.024662 1.3201E-05 535.599649758504 541.93749696785 50.551 0.49765 50.551 50.32 50.817 0 146 47 5 0 0 0 0.0030978 1 27839 41.621 23.025 1 5.0362 5.47 0 33934000 9029600 24904000 26403 1044 9962 10236 41329 41329 NLGFSPGDREENIR 14 0 2 Unmodified _NLGFSPGDREENIR_ 0 0 1 Q5TB52;B4DWB5;O95340 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.9376 3 535.265621 1602.77503 82616.79 0.49269 0.00026372 -0.052494 -2.8098E-05 0.44019 0.00023562 535.265802929571 541.937747724736 49.006 0.42619 49.006 48.801 49.227 -3.8147E-06 143 35 7 0 0 0 0.0040359 1 27466 38.189 19.593 1 4.4776 5.108 0 42004000 7271400 34732000 26404 1044 9962 10236 41330 41330 NLGFTAIPLHGQMSQSK 17 1 0 Oxidation (M) _NLGFTAIPLHGQM(ox)SQSK_ NLGFTAIPLHGQM(1)SQSK NLGFTAIPLHGQM(41.55)SQSK 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.9828 3 615.648966 1843.92507 76918.42 0.40781 0.00025107 -0.26686 -0.00016429 0.14095 8.6777E-05 615.983244753746 618.65459618373 77.094 1.0666 77.094 76.442 77.509 7.6294E-06 409 91 9 0 0 0 0.00033873 1 45401 41.554 41.554 1 1.4688 1.5976 0 48079000 17561000 30518000 26405 313 9963 10237 41331 41331 230 NLGFTAIPLHGQMSQSK 17 1 0 Oxidation (M) _NLGFTAIPLHGQM(ox)SQSK_ NLGFTAIPLHGQM(1)SQSK NLGFTAIPLHGQM(44.62)SQSK 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 927.4784 2 922.96981 1843.92507 63964.54 0.55624 0.00051339 -0.0080117 -7.3945E-06 0.54823 0.000506 923.471912529894 927.478090913445 77.087 0.33531 77.087 76.897 77.233 -7.6294E-06 91 29 5 0 0 0 0.00043696 1 45506 44.616 38.892 1 1.3478 1.3998 0 11403000 4376500 7026000 26406 313 9963 10237 41332 41332 230 NLGFTAIPLHGQMSQSK 17 1 0 Oxidation (M) _NLGFTAIPLHGQM(ox)SQSK_ NLGFTAIPLHGQM(1)SQSK NLGFTAIPLHGQM(42.34)SQSK 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.9835 3 615.648966 1843.92507 76690.63 0.2716 0.00016721 0.35374 0.00021778 0.62534 0.00038499 615.64921120252 618.320390683 75.88 1.0044 75.88 75.458 76.462 0 399 90 9 0 0 0 0.00031053 1 45656 42.338 42.338 1 1.4116 1.5913 0 61111000 20923000 40188000 26407 313 9963 10237 41333 41333 230 NLGFTAIPLHGQMSQSK 17 1 0 Oxidation (M) _NLGFTAIPLHGQM(ox)SQSK_ NLGFTAIPLHGQM(1)SQSK NLGFTAIPLHGQM(46.88)SQSK 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 923.4697 2 922.96981 1843.92507 64162.87 0.45544 0.00042036 -0.19414 -0.00017919 0.2613 0.00024117 922.968838503349 926.977173468111 75.885 0.40303 75.885 75.613 76.016 0 95 36 4 0 0 0 0.00028107 1 45736 46.88 46.88 1 0.94168 0.94648 0 27257000 6722600 20534000 26408 313 9963 10237 41334 41334 230 NLGFTAIPLHGQMSQSK 17 1 0 Oxidation (M) _NLGFTAIPLHGQM(ox)SQSK_ NLGFTAIPLHGQM(1)SQSK NLGFTAIPLHGQM(41.86)SQSK 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.649 3 615.648966 1843.92507 75327.89 0.48174 0.00029658 0.21542 0.00013263 0.69716 0.00042921 615.983348024592 618.320133203805 88.107 1.055 88.107 87.668 88.723 0 291 64 9 0 0 0 0.00032772 1 48534 41.86 41.86 1 0.82051 0.64979 0 6290200 3410900 2879400 26409 313 9963 10237 41335 41335 230 NLGFTAIPLHGQMSQSK 17 1 0 Oxidation (M) _NLGFTAIPLHGQM(ox)SQSK_ NLGFTAIPLHGQM(1)SQSK NLGFTAIPLHGQM(42.65)SQSK 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.32 3 615.648966 1843.92507 76350.13 0.43773 0.00026949 -0.1245 -7.6647E-05 0.31324 0.00019284 615.648888799278 618.654592216991 87.926 0.7457 87.926 87.589 88.334 0 205 43 7 0 0 0 0.00029938 2 47577 42.647 41.412 1 0.9023 0.7359 0 5808000 2900000 2907900 26410 313 9963 10237 41336;41337 41336 230 NLGIPIITVLGDSK 14 1 0 Unmodified _NLGIPIITVLGDSK_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.4344 2 720.427042 1438.83953 73606.48 0.96049 0.00069196 0.35609 0.00025653 1.3166 0.0009485 720.427254810769 724.434324806429 126.3 0.55435 126.3 126.05 126.6 0 169 42 6 0 0 0 0.00021588 2 82160 67.08 49.215 1 0.87412 0.86429 0 9419300 4922900 4496400 26411 1725 9964 10238 41338;41339 41339 NLGIPIITVLGDSK 14 1 0 Unmodified _NLGIPIITVLGDSK_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.4346 2 720.427042 1438.83953 72752.84 0.98665 0.00071081 0.39776 0.00028656 1.3844 0.00099737 720.427475606106 724.434238845432 125.87 0.48859 125.87 125.65 126.13 0 143 29 7 0 0 0 0.0001955 3 83887 69.979 52.115 1 0.91853 0.94918 0 11426000 6139200 5286400 26412 1725 9964 10238 41340;41341;41342 41341 NLGIVSVTSTDISSLYAK 18 1 0 Unmodified _NLGIVSVTSTDISSLYAK_ 0 0 0 B4DXX1;B2R713;Q7Z2T5;X6RK96 B4DXX1 B4DXX1 TRMT1L TRMT1-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 938.5097 2 934.504206 1866.99386 63975.73 0.94854 0.00088641 -1.6201 -0.001514 -0.67152 -0.00062754 935.003787946307 938.510757229478 115.88 0.31612 115.88 115.72 116.03 0 72 18 6 0 0 0 3.4046E-05 3 73791 63.727 57.694 1 1.2775 1.2967 0 6532700 3211900 3320800 26413 846 9965 10239 41343;41344;41345 41343 NLGIVSVTSTDISSLYAK 18 1 0 Unmodified _NLGIVSVTSTDISSLYAK_ 0 0 0 B4DXX1;B2R713;Q7Z2T5;X6RK96 B4DXX1 B4DXX1 TRMT1L TRMT1-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 934.4206 2 934.504206 1866.99386 NaN NaN NaN -0.53882 -0.00050353 NaN NaN NaN NaN 115.37 0.27193 115.37 115.23 115.5 0 0 0 0 0.037868 1 75338 43.991 35.037 1 NaN NaN 0 3670600 3670600 0 26414 846 9965 10239 41346 41346 NLGPINEWWITGFDGGEK 18 1 0 Unmodified _NLGPINEWWITGFDGGEK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1017.4918 2 1016.9918 2031.96904 60440.39 0.77454 0.0007877 -0.14645 -0.00014894 0.62809 0.00063876 1017.49251571504 1021.50061926438 126.97 0.36938 126.97 126.77 127.14 -7.6294E-06 96 21 7 0 0 0 0.000628 2 82647 42.789 42.789 1 0.44258 0.44514 0 5260800 3485000 1775800 26415 222 9966 10240 41347;41348 41348 NLGPINEWWITGFDGGEK 18 1 0 Unmodified _NLGPINEWWITGFDGGEK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1016.9943 2 1016.9918 2031.96904 60143.74 0.67144 0.00068285 0.6566 0.00066776 1.328 0.0013506 1016.99149271633 1020.99978518793 126.6 0.57754 126.6 126.24 126.82 -7.6294E-06 123 35 7 0 0 0 9.9461E-17 2 84443 121.28 121.28 1 0.50332 0.51268 0 9220900 5799500 3421400 26416 222 9966 10240 41349;41350 41350 NLGSINTELQDVQR 14 0 1 Unmodified _NLGSINTELQDVQR_ 0 0 0 O75396;A0A087X1A9 O75396 O75396 SEC22B Vesicle-trafficking protein SEC22b ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.9146 2 793.910276 1585.806 NaN NaN NaN 0.61979 0.00049206 NaN NaN NaN NaN 79.875 0.62853 79.875 79.553 80.181 0 0 0 0 2.329E-113 1 47421 220.25 201.01 1 NaN NaN 0 15593000 0 15593000 26417 1403 9967 10241 41351 41351 NLGSINTELQDVQR 14 0 1 Unmodified _NLGSINTELQDVQR_ 0 0 0 O75396;A0A087X1A9 O75396 O75396 SEC22B Vesicle-trafficking protein SEC22b ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 798.9172 2 793.910276 1585.806 NaN NaN NaN 2.3067 0.0018313 NaN NaN NaN NaN 91.878 0.31827 91.878 91.667 91.985 7.6294E-06 0 0 0 0.017417 1 50224 47.062 36.69 1 NaN NaN 0 1265900 0 1265900 26418 1403 9967 10241 41352 41352 NLGSINTELQDVQR 14 0 1 Unmodified _NLGSINTELQDVQR_ 0 0 0 O75396;A0A087X1A9 O75396 O75396 SEC22B Vesicle-trafficking protein SEC22b ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.9111 2 793.910276 1585.806 NaN NaN NaN 0.73872 0.00058648 NaN NaN NaN NaN 91.898 0.54745 91.898 91.622 92.17 0 0 0 0 0.00024737 1 50286 83.314 64.534 1 NaN NaN 0 1655600 1655600 0 26419 1403 9967 10241 41353 41353 NLGVVVAPHTLK 12 1 0 Unmodified _NLGVVVAPHTLK_ 0 0 0 Q9BYD2 Q9BYD2 Q9BYD2 MRPL9 39S ribosomal protein L9, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3844 2 624.377155 1246.73976 78885.34 0.55089 0.00034396 -0.0030036 -1.8754E-06 0.54788 0.00034209 624.377040320962 628.384530654742 60.507 0.28629 60.507 60.389 60.676 0 57 18 4 0 0 0 0.00034794 3 35424 72.321 72.321 1 1.1873 1.213 0 9318600 3899200 5419400 26420 2018 9968 10242 41354;41355;41356 41354 NLHNVLDSK 9 1 0 Unmodified _NLHNVLDSK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.2875 2 520.28018 1038.54581 87507.28 0.090425 4.7046E-05 0.3999 0.00020806 0.49032 0.00025511 520.280571106962 524.287257629912 27.542 0.28712 27.542 27.401 27.688 0 44 14 4 0 0 0 5.4614E-06 1 12830 132.13 108.34 1 0.98708 1.0403 0 23783000 12400000 11384000 26421 1581 9969 10243 41357 41357 NLHSEISGK 9 1 0 Unmodified _NLHSEISGK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.7593 2 492.759081 983.503609 87037.63 -0.24801 -0.00012221 0.51066 0.00025163 0.26265 0.00012942 492.759157980633 496.766278090954 19.393 0.21019 19.393 19.3 19.511 0 23 6 5 0 0 0 0.04703 1 5155 39.222 12.221 1 0.3991 0.31599 0 4961000 3453700 1507200 26422 1486 9970 10244 41358 41358 NLIAPIFLHR 10 0 1 Unmodified _NLIAPIFLHR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 401.913 3 398.576631 1192.70806 95126.49 0.17454 6.9566E-05 0.26601 0.00010603 0.44055 0.00017559 398.576564157217 401.912722116585 97.625 0.9012 97.625 97.391 98.292 -7.6294E-06 198 74 5 0 0 0 0.031043 2 59416 29.743 29.743 1 1.0919 1.1275 0 20071000 8605700 11465000 26423 1336 9971 10245 41359;41360 41359 NLIAPIFLHR 10 0 1 Unmodified _NLIAPIFLHR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 398.5761 3 398.576631 1192.70806 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.083 1 96.083 95.583 96.583 0 0 0 0 0.022035 1 59903 56.013 46.232 1 26424 1336 9971 10245 41361 41361 NLIAPIFLHR 10 0 1 Unmodified _NLIAPIFLHR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.9849 2 597.361308 1192.70806 80777.51 0.73431 0.00043865 0.5299 0.00031654 1.2642 0.00075519 597.361400414399 602.365082346187 96.354 0.80888 96.354 95.99 96.799 7.6294E-06 272 70 6 0 0 0 0.053412 1 60174 69.628 61.095 1 0.98777 1.0776 0 29732000 16407000 13325000 26425 1336 9971 10245 41362 41362 NLIAPIFLHR 10 0 1 Unmodified _NLIAPIFLHR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 402.264 3 398.576631 1192.70806 95186.91 0.3247 0.00012942 -0.070747 -2.8198E-05 0.25395 0.00010122 398.910909126739 401.912620577255 96.347 0.71396 96.347 96.028 96.742 0 186 62 6 0 0 0 0.02467 1 59959 42.743 42.743 1 1.0399 1.1356 0 38630000 19374000 19255000 26426 1336 9971 10245 41363 41363 NLIAPIFLHR 10 0 1 Unmodified _NLIAPIFLHR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.3665 2 597.361308 1192.70806 77885.9 0.65071 0.00038871 0.72158 0.00043104 1.3723 0.00081975 597.361550354495 602.365804214942 109.64 0.79385 109.64 109.33 110.12 0 168 38 6 0 0 0 0.048481 1 63032 42.109 42.109 1 1.7739 1.4739 0 10897000 4156700 6740500 26427 1336 9971 10245 41364 41364 NLIAPIFLHR 10 0 1 Unmodified _NLIAPIFLHR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.3663 2 597.361308 1192.70806 78358.37 0.73488 0.00043899 0.19256 0.00011503 0.92744 0.00055402 597.361372870735 602.365481904317 109.33 1.0004 109.33 108.98 109.98 0 153 47 6 0 0 0 0.0025324 1 61950 58.981 58.981 1 1.9806 1.6416 0 7850500 2833500 5016900 26428 1336 9971 10245 41365 41365 NLIDAGVDALR 11 0 1 Unmodified _NLIDAGVDALR_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6RUP8 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.8195 2 578.81967 1155.62479 79551.17 0.66305 0.00038379 0.16042 9.2854E-05 0.82347 0.00047664 578.819687802969 583.82384219319 95.51 1.0732 95.51 95.068 96.141 0 475 87 8 0 0 0 0.00079418 2 57953 72.434 20.897 1 1.2556 1.4652 0 196080000 83336000 112750000 26429 1282 9972 10246 41366;41367 41367 NLIDAGVDALR 11 0 1 Unmodified _NLIDAGVDALR_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6RUP8 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.8199 2 578.81967 1155.62479 78779.48 0.67093 0.00038835 -0.097084 -5.6194E-05 0.57385 0.00033215 578.819563824159 583.823694391096 94.794 1.0237 94.794 94.283 95.307 7.6294E-06 452 87 8 0 0 0 2.4636E-08 2 58837 121.5 23.867 1 1.2348 1.4122 0 158830000 74373000 84460000 26430 1282 9972 10246 41368;41369 41369 NLIDAGVDALR 11 0 1 Unmodified _NLIDAGVDALR_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6RUP8 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 578.8194 2 578.81967 1155.62479 79104.27 0.68499 0.00039649 -0.59315 -0.00034332 0.091847 5.3163E-05 578.819538131118 583.823699032338 108.57 0.95697 108.57 108.07 109.03 7.6294E-06 188 46 7 0 0 0 0.0045664 2 62325 57.785 18.48 1 1.264 1.0519 0 22007000 9529600 12477000 26431 1282 9972 10246 41370;41371 41371 NLIDAGVDALR 11 0 1 Unmodified _NLIDAGVDALR_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6RUP8 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.8243 2 578.81967 1155.62479 80258.23 0.50294 0.00029111 -0.8627 -0.00049935 -0.35977 -0.00020824 578.819532522912 583.823764103866 108.5 1.0593 108.5 107.9 108.95 7.6294E-06 232 53 7 0 0 0 0.0087198 3 61612 50.292 11.27 1 1.2845 1.0676 0 15434000 6747600 8686200 26432 1282 9972 10246 41372;41373;41374 41374 NLIIEAVTNLR 11 0 1 Unmodified _NLIIEAVTNLR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BU37 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.8742 2 628.372069 1254.72959 78890.45 0.70757 0.00044462 -0.88256 -0.00055458 -0.17499 -0.00010996 628.371461102468 633.375088222724 124.43 0.4769 124.43 124.16 124.64 0 66 19 5 0 0 0 0.016089 1 74500 45.997 27.217 1 1.335 1.1595 0 2285300 1012100 1273200 26433 1699 9973 10247 41375 41375 NLIIEAVTNLR 11 0 1 Unmodified _NLIIEAVTNLR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BU37 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.3724 2 628.372069 1254.72959 78578.09 0.73544 0.00046213 -0.8047 -0.00050565 -0.069266 -4.3525E-05 628.371696012669 633.375131894829 124.14 0.39064 124.14 124 124.39 0 56 15 6 0 0 0 0.01831 1 73435 44.863 30.657 1 1.6445 1.4817 0 2046700 1045500 1001200 26434 1699 9973 10247 41376 41376 NLILGSLR 8 0 1 Unmodified _NLILGSLR_ 0 0 0 REV__K7ENW1 REV__K7ENW1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.2833 2 443.279452 884.544351 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.387 1 88.387 87.887 88.887 0 0 0 0 0.0049299 1 54514 87.323 20.291 1 + 26435 2157 9974 10248 41377 41377 NLIQTLVSGIAPATR 15 0 1 Unmodified _NLIQTLVSGIAPATR_ 0 0 0 E7EXA6;Q96S08;A0A0D9SF58;Q8WVB6 E7EXA6 E7EXA6 CHTF18;RUVBL Chromosome transmission fidelity protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.4581 2 777.454122 1552.89369 71151.46 0.98181 0.00076331 -0.58683 -0.00045623 0.39498 0.00030708 777.453406939788 782.959607412911 126.46 0.42734 126.46 126.23 126.66 0 120 32 5 0 0 0 2.2745E-10 2 82215 119.39 107.17 1 1.2129 1.2324 0 7464100 3214500 4249600 26436 524 9975 10249 41378;41379 41379 NLIQTLVSGIAPATR 15 0 1 Unmodified _NLIQTLVSGIAPATR_ 0 0 0 E7EXA6;Q96S08;A0A0D9SF58;Q8WVB6 E7EXA6 E7EXA6 CHTF18;RUVBL Chromosome transmission fidelity protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.4533 2 777.454122 1552.89369 71572.79 1.0384 0.00080727 -0.69695 -0.00054184 0.34141 0.00026543 777.453490458774 782.457500811395 125.99 0.43059 125.99 125.75 126.18 0 108 26 6 0 0 0 4.4304E-10 2 83904 113.77 99.077 1 1.1446 1.1282 0 13047000 6291300 6755600 26437 524 9975 10249 41380;41381 41381 NLLALIHR 8 0 1 Unmodified _NLLALIHR_ 0 0 0 O15042;E7ET15 O15042 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.3047 2 475.300719 948.586885 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.965 1 82.965 82.465 83.465 0 0 0 0 0.014558 1 49628 70.912 19.947 1 26438 1374 9976 10250 41382 41382 NLLANQTLVYSQDLGEMTK 19 1 0 Oxidation (M) _NLLANQTLVYSQDLGEM(ox)TK_ NLLANQTLVYSQDLGEM(1)TK NLLANQTLVYSQDLGEM(48.66)TK 0 1 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1082.0511 2 1077.54099 2153.06743 NaN NaN NaN 0.26013 0.0002803 NaN NaN NaN NaN 99.811 0.32854 99.811 99.642 99.971 0 0 0 0 0.00071274 1 61111 48.659 33.973 1 NaN NaN 0 4601900 0 4601900 26439 1928 9977 10251 41383 41383 1764 NLLANQTLVYSQDLGEMTK 19 1 0 Oxidation (M) _NLLANQTLVYSQDLGEM(ox)TK_ NLLANQTLVYSQDLGEM(1)TK NLLANQTLVYSQDLGEM(63.76)TK 0 1 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1077.5422 2 1077.54099 2153.06743 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.771 1 99.771 99.271 100.27 0 0 0 0 7.4109E-05 1 61118 63.76 49.074 1 26440 1928 9977 10251 41384 41384 1764 NLLANQTLVYSQDLGEMTK 19 1 0 Oxidation (M) _NLLANQTLVYSQDLGEM(ox)TK_ NLLANQTLVYSQDLGEM(1)TK NLLANQTLVYSQDLGEM(97.55)TK 0 1 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1082.0497 2 1077.54099 2153.06743 NaN NaN NaN 0.041066 4.425E-05 NaN NaN NaN NaN 99.179 0.33571 99.179 99.052 99.388 0 0 0 0 2.1166E-13 3 62160 97.551 82.865 1 NaN NaN 0 6917300 0 6917300 26441 1928 9977 10251 41385;41386;41387 41387 1764 NLLCGFYGR 9 0 1 Unmodified _NLLCGFYGR_ 0 0 0 W0HJ78;B0QYD3;Q9UH17;B7ZLZ1;A0A0K0MJ49;P31941 W0HJ78 W0HJ78 APOBEC3B;APOBEC3A DNA dC->dU-editing enzyme APOBEC-3B;DNA dC->dU-editing enzyme APOBEC-3A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.2721 2 550.271301 1098.52805 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.384 1 84.384 83.884 84.884 0 0 0 0 0.025048 1 50576 54.611 34.825 1 26442 807 9978 10252 41388 41388 NLLCPFCLK 9 1 0 Unmodified _NLLCPFCLK_ 0 0 0 Q8ND82;B3KUN2;A0A0D9SEJ8;Q86YH2;A8K124;B4DHL1;A0A024R5W1;Q6N043;H0YLA6;H0YL38 Q8ND82;A8K124 Q8ND82 ZNF280C;ZNF280B;SUHW4;ZNF280D Zinc finger protein 280C;Zinc finger protein 280B;Zinc finger protein 280D MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.8068 2 582.798837 1163.58312 81644.99 0.54136 0.0003155 0.14456 8.4248E-05 0.68591 0.00039975 582.798706059689 586.805952268682 117.41 0.42467 117.41 117.2 117.63 0 70 19 5 0 0 0 0.012656 2 69141 57.281 40.741 1 1.6992 1.4297 0 2140800 791840 1349000 26443 1924;189 9979 10253 41389;41390 41389 NLLCPFCLK 9 1 0 Unmodified _NLLCPFCLK_ 0 0 0 Q8ND82;B3KUN2;A0A0D9SEJ8;Q86YH2;A8K124;B4DHL1;A0A024R5W1;Q6N043;H0YLA6;H0YL38 Q8ND82;A8K124 Q8ND82 ZNF280C;ZNF280B;SUHW4;ZNF280D Zinc finger protein 280C;Zinc finger protein 280B;Zinc finger protein 280D MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.8061 2 582.798837 1163.58312 82267.71 0.51242 0.00029864 0.15159 8.8344E-05 0.66401 0.00038698 582.798845965987 586.806177046164 117.12 0.53047 117.12 116.91 117.44 0 85 23 6 0 0 0 0.029026 2 68070 46.426 38.491 1 1.5756 1.2693 0 1937800 843390 1094400 26444 1924;189 9979 10253 41391;41392 41391 NLLDTYNTELLK 12 1 0 Unmodified _NLLDTYNTELLK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.893 2 718.885207 1435.75586 75597.98 0.87352 0.00062796 0.25431 0.00018282 1.1278 0.00081078 718.885440685868 722.892483312445 104.51 0.6582 104.51 104.13 104.79 0 146 53 4 0 0 0 0.0056707 2 64492 50.353 50.353 1 0.95772 0.96437 0 9992100 6290100 3702000 26445 1680 9980 10254 41393;41394 41393 NLLDTYNTELLK 12 1 0 Unmodified _NLLDTYNTELLK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.8857 2 718.885207 1435.75586 76628.05 0.53504 0.00038463 0.55955 0.00040226 1.0946 0.00078689 718.885137696378 722.892834718071 103.74 0.69261 103.74 103.51 104.21 -7.6294E-06 175 60 5 0 0 0 0.013574 1 65692 44.203 44.203 1 0.87873 0.91948 0 10430000 4821000 5608700 26446 1680 9980 10254 41395 41395 NLLDTYNTELLK 12 1 0 Unmodified _NLLDTYNTELLK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.8922 2 718.885207 1435.75586 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.59 1 103.59 103.09 104.09 0 0 0 0 0.019983 1 65553 51.436 18.058 1 26447 1680 9980 10254 41396 41396 NLLDTYNTELLK 12 1 0 Unmodified _NLLDTYNTELLK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.8846 2 718.885207 1435.75586 74180.27 1.0065 0.00072353 0.14601 0.00010496 1.1525 0.0008285 718.884426159888 722.892695235157 115.99 0.48056 115.99 115.75 116.23 0 88 19 7 0 0 0 0.0067883 2 68087 48.981 48.981 1 2.0635 1.6359 0 4273300 1078600 3194700 26448 1680 9980 10254 41397;41398 41398 NLLDTYNTELLK 12 1 0 Unmodified _NLLDTYNTELLK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.8843 2 718.885207 1435.75586 72755 0.9475 0.00068114 0.68361 0.00049144 1.6311 0.0011726 718.885062426443 722.892704559563 115.88 0.49544 115.88 115.68 116.17 0 108 24 8 0 0 0 0.04643 1 67065 33.225 33.225 1 2.2866 1.8773 0 5219600 1379000 3840600 26449 1680 9980 10254 41399 41399 NLLEAGK 7 1 0 Unmodified _NLLEAGK_ 0 0 0 A0A024R753;Q9NW13;B4DJ90;C9JE21 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 372.716 2 372.716153 743.417754 99498.19 -0.096434 -3.5943E-05 0.78893 0.00029405 0.69249 0.0002581 372.71628519834 376.723352935367 30.51 0.35241 30.51 30.328 30.681 0 91 29 5 0 0 0 0.02684 1 14957 80.462 3.0883 1 1.0244 1.0712 0 34404000 17736000 16669000 26450 214 9981 10255 41400 41400 NLLELEVQK 9 1 0 Unmodified _NLLELEVQK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.3137 2 543.313689 1084.61282 83678.09 0.72777 0.00039541 -0.861 -0.00046779 -0.13323 -7.2388E-05 543.313327681494 547.32119676337 94.821 0.72275 94.821 94.544 95.266 0 145 50 5 0 0 0 0.021536 3 53042 49.423 12.813 1 1.0445 0.81035 0 3517700 1788300 1729400 26451 1928 9982 10256 41401;41402;41403 41402 NLLESIPTHSDQEK 14 1 0 Unmodified _NLLESIPTHSDQEK_ 0 0 0 A0PJ81;A0A024R3V1;A0A024R3R1;Q4LE39 A0PJ81 A0PJ81 ARID4B AT-rich interactive domain-containing protein 4B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.9052 2 805.904659 1609.79476 NaN NaN NaN 0.65522 0.00052805 NaN NaN NaN NaN 58.869 0.16884 58.869 58.804 58.973 3.8147E-06 0 0 0 0.014936 1 33471 48.741 34.051 1 NaN NaN 0 2033200 2033200 0 26452 138 9983 10257 41404 41404 NLLESIPTHSDQEK 14 1 0 Unmodified _NLLESIPTHSDQEK_ 0 0 0 A0PJ81;A0A024R3V1;A0A024R3R1;Q4LE39 A0PJ81 A0PJ81 ARID4B AT-rich interactive domain-containing protein 4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 805.9046 2 805.904659 1609.79476 73602.88 0.62067 0.0005002 -0.16588 -0.00013369 0.45478 0.00036651 805.904549822727 809.911569356421 57.609 0.19844 57.609 57.487 57.685 0 32 15 4 0 0 0 0.0014549 1 33360 53.569 45.264 1 1.2978 1.3401 0 4802700 2259200 2543500 26453 138 9983 10257 41405 41405 NLLESYHVPELIK 13 1 0 Unmodified _NLLESYHVPELIK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.6274 3 518.955724 1553.84534 85186.86 0.59486 0.00030871 0.17162 8.9064E-05 0.76649 0.00039777 519.290334194915 521.961538928748 103.4 0.81801 103.4 103.01 103.83 0 154 66 5 0 0 0 9.6127E-05 2 63719 65.043 65.043 1 2.4886 2.4589 0 25590000 7226600 18364000 26454 1207 9984 10258 41406;41407 41406 NLLESYHVPELIK 13 1 0 Unmodified _NLLESYHVPELIK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.9616 3 518.955724 1553.84534 84884.07 0.65128 0.00033798 -0.25127 -0.0001304 0.40001 0.00020759 518.955549927484 521.626914985767 102.2 0.71628 102.2 101.89 102.6 7.6294E-06 213 54 6 0 0 0 3.7669E-05 1 64362 77.527 68.928 1 2.5476 2.6427 0 33415000 10911000 22504000 26455 1207 9984 10258 41408 41408 NLLESYHVPELIK 13 1 0 Unmodified _NLLESYHVPELIK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.9376 2 777.929948 1553.84534 70172.52 0.91321 0.00071041 0.36789 0.00028619 1.2811 0.00099661 778.431667078733 781.937136255538 102.2 0.62565 102.2 101.95 102.57 7.6294E-06 182 46 6 0 0 0 2.4798E-13 3 64380 127.17 127.17 1 2.3352 2.3656 0 29271000 7953600 21317000 26456 1207 9984 10258 41409;41410;41411 41409 NLLESYHVPELIK 13 1 0 Unmodified _NLLESYHVPELIK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.6275 3 518.955724 1553.84534 85343.62 0.66311 0.00034413 0.42021 0.00021807 1.0833 0.0005622 518.955842355039 521.627293363168 114.41 0.43413 114.41 114.25 114.69 0 79 18 7 0 0 0 0.012354 1 66812 31.389 25.307 1 1.4371 1.1283 0 3940700 1540600 2400100 26457 1207 9984 10258 41412 41412 NLLESYHVPELIK 13 1 0 Unmodified _NLLESYHVPELIK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.6274 3 518.955724 1553.84534 84476.82 0.40944 0.00021248 0.55584 0.00028846 0.96529 0.00050094 518.955812774394 521.62717908319 114.26 0.65163 114.26 113.83 114.48 0 71 27 5 0 0 0 0.0035199 2 65771 40.552 40.552 1 1.5605 1.2732 0 4670200 1608100 3062000 26458 1207 9984 10258 41413;41414 41413 NLLFQDCEK 9 1 0 Unmodified _NLLFQDCEK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.78 2 583.779156 1165.54376 78676.84 0.56446 0.00032952 0.031021 1.8109E-05 0.59549 0.00034763 583.779241976469 587.786296953252 73.389 0.71552 73.389 72.996 73.712 0 243 51 6 0 0 0 0.052105 1 38726 37.191 21.529 1 1.3498 1.0797 0 7100000 3175200 3924800 26459 895 9985 10259 41415 41415 NLLFQDCEK 9 1 0 Unmodified _NLLFQDCEK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.7794 2 583.779156 1165.54376 78598.62 0.45379 0.00026492 0.23852 0.00013924 0.69231 0.00040416 583.779150221863 587.786415668167 73.775 0.83908 73.775 73.355 74.194 0 254 59 6 0 0 0 0.0091583 1 38218 60.436 44.234 1 1.2626 1.0294 0 6519900 2886500 3633500 26460 895 9985 10259 41416 41416 NLLNLDVIK 9 1 0 Unmodified _NLLNLDVIK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.3185 2 521.318774 1040.623 83451.65 0.58572 0.00030535 -0.024143 -1.2586E-05 0.56158 0.00029276 521.318938329155 525.325599935346 107.53 1.3136 107.53 106.71 108.03 0 411 99 8 0 0 0 0.0043738 1 66848 69.423 28.394 1 0.85277 0.96518 0 88040000 48408000 39632000 26461 486 9986 10260 41417 41417 NLLNLDVIK 9 1 0 Unmodified _NLLNLDVIK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.319 2 521.318774 1040.623 83298.96 0.60118 0.00031341 -0.15202 -7.9251E-05 0.44916 0.00023416 521.318937587793 525.325533899769 106.8 1.4687 106.8 105.89 107.35 0 393 109 8 0 0 0 0.00034217 1 67935 101.43 26.218 1 0.84165 0.941 0 105930000 57182000 48745000 26462 486 9986 10260 41418 41418 NLLNLDVIK 9 1 0 Unmodified _NLLNLDVIK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.3191 2 521.318774 1040.623 83404.84 0.52854 0.00027554 0.16606 8.6572E-05 0.69461 0.00036211 521.318810935961 525.325862075784 118.96 0.86974 118.96 118.69 119.56 0 192 39 8 0 0 0 0.0070722 2 70268 62.582 25.881 1 1.2516 1.0215 0 32904000 14530000 18374000 26463 486 9986 10260 41419;41420 41419 NLLNLDVIK 9 1 0 Unmodified _NLLNLDVIK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.3264 2 521.318774 1040.623 83465.79 0.59514 0.00031026 -0.2279 -0.00011881 0.36723 0.00019145 521.318646212124 525.325639592027 118.81 0.7859 118.81 118.45 119.23 0 196 35 8 0 0 0 0.00034217 2 69189 101.43 26.218 1 1.2855 1.0565 0 27928000 13366000 14562000 26464 486 9986 10260 41421;41422 41422 NLLNLDVIKK 10 2 0 Unmodified _NLLNLDVIKK_ 0 0 1 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.381 2 585.366256 1168.71796 83417.7 0.74755 0.00043759 0.76926 0.0004503 1.5168 0.00088789 585.366479178739 593.381012750138 97.306 0.41315 97.306 97.079 97.493 0 76 19 5 0 0 0 0.035007 1 54717 46.462 28.022 1 1.5363 1.3614 0 2311300 721010 1590300 26465 486 9987 10261 41423 41423 NLLNSVIGR 9 0 1 Unmodified _NLLNSVIGR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.2975 2 493.293091 984.571629 87458.65 0.50558 0.0002494 0.44199 0.00021803 0.94757 0.00046743 493.292970144033 498.297339514265 86.985 0.22222 86.985 86.876 87.098 -7.6294E-06 66 14 6 0 0 0 1.5452E-05 2 52459 122.13 32.455 1 1.2588 1.2786 0 27744000 11247000 16497000 26466 122 9988 10262 41424;41425 41424 NLLNSVIGR 9 0 1 Unmodified _NLLNSVIGR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.2974 2 493.293091 984.571629 87118.76 0.5085 0.00025084 0.81347 0.00040128 1.322 0.00065212 493.293099655426 498.297585428561 85.836 0.30953 85.836 85.664 85.973 0 77 21 6 0 0 0 1.3179E-05 2 52892 124.08 38.824 1 1.2723 1.4659 0 73127000 31948000 41179000 26467 122 9988 10262 41426;41427 41426 NLLNSVIGR 9 0 1 Unmodified _NLLNSVIGR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.297 2 493.293091 984.571629 89790.22 0.23246 0.00011467 0.044771 2.2085E-05 0.27723 0.00013676 493.293037336095 498.297141302045 99.657 0.24781 99.657 99.516 99.764 0 51 14 6 0 0 0 0.011198 1 56409 58.596 15.682 1 1.2863 1.1046 0 6365600 2890900 3474800 26468 122 9988 10262 41428 41428 NLLNSVIGR 9 0 1 Unmodified _NLLNSVIGR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.2932 2 493.293091 984.571629 92851.03 0.1181 5.8257E-05 -0.62617 -0.00030889 -0.50808 -0.00025063 493.293005542043 498.296563687603 99.485 0.21043 99.485 99.341 99.551 0 44 14 4 0 0 0 0.0070864 2 55433 62.546 19.423 1 1.6485 1.4459 0 3589500 1549500 2040000 26469 122 9988 10262 41429;41430 41429 NLLQELK 7 1 0 Unmodified _NLLQELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 429.2582 2 429.258185 856.501818 93154.82 0.011876 5.0979E-06 0.27237 0.00011692 0.28425 0.00012202 429.258133821578 433.265363689613 73.128 0.32409 73.128 73.033 73.357 7.6294E-06 135 29 8 0 0 0 0.01251 2 42880 105.39 21.776 1 0.88694 1.0486 0 402460000 210520000 191930000 26470 2070 9989 10263 41431;41432 41431 NLLQELK 7 1 0 Unmodified _NLLQELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.2646 2 429.258185 856.501818 92197.91 0.48225 0.00020701 -0.28762 -0.00012346 0.19463 8.3547E-05 429.257940000206 433.265066385336 71.751 0.30267 71.751 71.643 71.945 0 124 25 8 0 0 0 0.01251 2 43033 105.39 21.776 1 0.85448 1.0065 0 515500000 275520000 239980000 26471 2070 9989 10263 41433;41434 41434 NLLQELK 7 1 0 Unmodified _NLLQELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 429.2583 2 429.258185 856.501818 93488.73 -0.24602 -0.00010561 0.52751 0.00022644 0.28149 0.00012083 429.258282588058 433.265409581691 83.965 0.98248 83.965 83.649 84.632 0 368 78 7 0 0 0 0.043265 2 45725 58.167 5.9151 1 1.7273 1.421 0 39485000 13132000 26353000 26472 2070 9989 10263 41435;41436 41436 NLLQELK 7 1 0 Unmodified _NLLQELK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 433.2654 2 429.258185 856.501818 93587.21 -0.08278 -3.5534E-05 0.34503 0.00014811 0.26225 0.00011257 429.258234388912 433.265326784375 84.047 0.94955 84.047 83.735 84.685 0 350 75 6 0 0 0 0.02687 1 44956 81.297 18.582 1 1.7901 1.4645 0 26729000 10023000 16706000 26473 2070 9989 10263 41437 41437 NLLQLLPIPK 10 1 0 Unmodified _NLLQLLPIPK_ 0 0 0 Q5T3J3 Q5T3J3 Q5T3J3 LRIF1 Ligand-dependent nuclear receptor-interacting factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.8743 2 574.873717 1147.73288 81867.18 0.63869 0.00036716 0.34007 0.00019549 0.97875 0.00056266 574.873651661335 578.881293040412 128.55 0.28075 128.55 128.43 128.71 0 36 18 4 0 0 0 0.0013339 1 83860 74.127 74.127 1 0.55998 0.63657 0 1880300 1052800 827510 26474 1821 9990 10264 41438 41438 NLLQLLPIPK 10 1 0 Unmodified _NLLQLLPIPK_ 0 0 0 Q5T3J3 Q5T3J3 Q5T3J3 LRIF1 Ligand-dependent nuclear receptor-interacting factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.8812 2 574.873717 1147.73288 NaN NaN NaN -0.13981 -8.0373E-05 NaN NaN NaN NaN 128.12 0.25587 128.12 127.97 128.23 0 0 0 0 0.0073475 1 85643 66.073 55.363 1 NaN NaN 0 645110 0 645110 26475 1821 9990 10264 41439 41439 NLLSCVYSCPSYIAK 15 1 0 Unmodified _NLLSCVYSCPSYIAK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B3KWS1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.9291 2 887.928765 1773.84298 63361.73 0.96785 0.00085938 0.65589 0.00058238 1.6237 0.0014418 888.431103126392 891.936120374773 100.95 0.6946 100.95 100.63 101.32 0 210 50 7 0 0 0 8.4103E-06 2 61854 94.191 94.191 1 0.83951 0.85787 0 28293000 15244000 13049000 26476 897 9991 10265 41440;41441 41441 NLLSCVYSCPSYIAK 15 1 0 Unmodified _NLLSCVYSCPSYIAK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B3KWS1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.9291 2 887.928765 1773.84298 63625.23 0.55705 0.00049462 0.88498 0.0007858 1.442 0.0012804 887.929349129804 892.437935508128 100.22 0.58952 100.22 99.928 100.52 0 212 48 6 0 0 0 4.3705E-05 2 62804 85.845 85.845 1 0.80539 0.8547 0 23426000 11286000 12140000 26477 897 9991 10265 41442;41443 41443 NLLSCVYSCPSYIAK 15 1 0 Unmodified _NLLSCVYSCPSYIAK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B3KWS1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 887.9326 2 887.928765 1773.84298 63798.15 0.88292 0.00078397 0.91719 0.0008144 1.8001 0.0015984 887.929476377211 891.937058670108 113.39 0.56953 113.39 113.15 113.72 7.6294E-06 188 28 11 0 0 0 0.00021588 3 65977 75.479 75.479 1 1.1741 0.93325 0 19253000 8476600 10776000 26478 897 9991 10265 41444;41445;41446 41445 NLLSDCSVVSTSLEDK 16 1 0 Unmodified _NLLSDCSVVSTSLEDK_ 0 0 0 O95235;D6RBN1;D6R9E4 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.9266 2 883.927474 1765.84039 64899.81 0.77815 0.00068783 0.11008 9.7299E-05 0.88822 0.00078513 883.927654483332 887.935163804868 93.726 0.63878 93.726 93.365 94.004 0 222 55 5 0 0 0 1.9394E-06 2 56706 93.959 93.959 1 0.86645 0.93675 0 36427000 17494000 18933000 26479 1421 9992 10266 41447;41448 41447 NLLSDCSVVSTSLEDK 16 1 0 Unmodified _NLLSDCSVVSTSLEDK_ 0 0 0 O95235;D6RBN1;D6R9E4 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.9266 2 883.927474 1765.84039 64241.06 0.68297 0.0006037 0.041207 3.6424E-05 0.72418 0.00064012 883.927385539645 887.93521134354 92.986 0.61572 92.986 92.677 93.293 0 182 51 5 0 0 0 5.709E-09 2 57571 109.44 109.44 1 0.89725 0.98985 0 43900000 23084000 20816000 26480 1421 9992 10266 41449;41450 41450 NLLSDCSVVSTSLEDK 16 1 0 Unmodified _NLLSDCSVVSTSLEDK_ 0 0 0 O95235;D6RBN1;D6R9E4 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 883.9304 2 883.927474 1765.84039 62846.6 0.61242 0.00054133 -0.23303 -0.00020598 0.37939 0.00033536 883.92754760256 887.934638270864 107.19 0.53755 107.19 106.85 107.39 7.6294E-06 227 32 10 0 0 0 0.0023933 1 61216 41.092 40.807 1 1.5278 1.2461 0 32502000 13174000 19327000 26481 1421 9992 10266 41451 41451 NLLSDCSVVSTSLEDK 16 1 0 Unmodified _NLLSDCSVVSTSLEDK_ 0 0 0 O95235;D6RBN1;D6R9E4 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 884.431 2 883.927474 1765.84039 63458.19 0.28239 0.00024961 0.15497 0.00013698 0.43736 0.0003866 883.927813686234 887.93512499951 107.09 0.6375 107.09 106.76 107.39 0 243 40 10 0 0 0 0.00034781 2 60281 53.001 51.168 1 1.4464 1.1788 0 25746000 10887000 14859000 26482 1421 9992 10266 41452;41453 41452 NLLTAAADAIER 12 0 1 Unmodified _NLLTAAADAIER_ 0 0 0 Q6TGM1;Q6TGM0;P33897 Q6TGM1 Q6TGM1 ALD;ABCD1 ATP-binding cassette sub-family D member 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.8518 2 629.343509 1256.67246 NaN NaN NaN 1.1139 0.00070101 NaN NaN NaN NaN 120.5 0.32293 120.5 120.25 120.57 -7.6294E-06 0 0 0 0.024708 1 71519 49.5 20.414 1 NaN NaN 0 827720 0 827720 26483 1538 9993 10267 41454 41454 NLLTVTSSDEMMK 13 1 0 2 Oxidation (M) _NLLTVTSSDEM(ox)M(ox)K_ NLLTVTSSDEM(1)M(1)K NLLTVTSSDEM(115.57)M(115.57)K 0 2 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.858 2 750.849649 1499.68475 69002.63 0.76866 0.00057715 0.065635 4.9282E-05 0.83429 0.00062643 750.849554595716 754.856742959635 56.355 0.48171 56.355 56.116 56.597 -3.8147E-06 179 42 5 0 0 0 1.1375E-08 1 31724 115.57 115.57 1 1.1185 1.1636 0 29639000 13807000 15832000 26484 1665 9994 10268 41455 41455 1460;1461 NLLTVTSSDEMMK 13 1 0 2 Oxidation (M) _NLLTVTSSDEM(ox)M(ox)K_ NLLTVTSSDEM(1)M(1)K NLLTVTSSDEM(46.35)M(46.35)K 0 2 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.8501 2 750.849649 1499.68475 69137.63 0.4033 0.00030282 0.28682 0.00021536 0.69012 0.00051818 750.849411425937 754.857140360758 55.382 0.62305 55.382 55.101 55.724 0 162 44 5 0 0 0 0.0075228 1 31614 46.352 46.352 1 1.1804 1.2021 0 30701000 14777000 15924000 26485 1665 9994 10268 41456 41456 1460;1461 NLLVTSGK 8 1 0 Unmodified _NLLVTSGK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 420.2588 2 416.25036 830.486168 92134.65 0.4178 0.00017391 0.10667 4.4402E-05 0.52447 0.00021831 416.25023386572 420.257430096015 35.906 0.85344 35.906 35.593 36.446 0 212 71 6 0 0 0 0.013467 1 18274 65.246 33.181 1 0.87407 0.98212 0 73965000 36914000 37050000 26486 1827 9995 10269 41457 41457 NLLVTSGK 8 1 0 Unmodified _NLLVTSGK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 420.2573 2 416.25036 830.486168 94791.34 -0.36058 -0.00015009 0.26308 0.00010951 -0.097499 -4.0584E-05 416.25029943047 420.257483061319 41.073 0.90859 41.073 40.711 41.62 0 253 72 6 0 0 0 0.035324 1 18946 49.097 37.328 1 1.2704 1.02 0 7726300 3783100 3943100 26487 1827 9995 10269 41458 41458 NLMQFHTVGTK 11 1 0 Oxidation (M) _NLM(ox)QFHTVGTK_ NLM(1)QFHTVGTK NLM(52.73)QFHTVGTK 0 1 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.3344 2 646.326805 1290.63906 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.044 1 31.044 30.544 31.544 0 0 0 0 0.0099761 1 15299 52.725 29.297 1 26488 122 9996 10270 41459 41459 108 NLNDSSLFVSAEEFGHLLDENMGSK 25 1 0 Oxidation (M) _NLNDSSLFVSAEEFGHLLDENM(ox)GSK_ NLNDSSLFVSAEEFGHLLDENM(1)GSK NLNDSSLFVSAEEFGHLLDENM(48.11)GSK 0 1 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.7661 3 923.760589 2768.25994 62629.52 0.92653 0.00085589 -0.69124 -0.00063854 0.23529 0.00021735 924.094180080997 926.764655463282 126.5 0.60738 126.5 126.18 126.79 -7.6294E-06 141 37 7 0 0 0 6.4034E-07 1 84402 48.115 48.115 1 0.4968 0.51563 0 9873100 5994900 3878200 26489 836;1683 9997 10271 41460 41460 664 NLNHVSYGR 9 0 1 Unmodified _NLNHVSYGR_ 0 0 0 B4E0N9;B4DMG8;B4DMF5;B3KT18;Q53GW3;E9KL48;P00367;Q14400;Q9BSD0;A0A140VK14;P49448 B4E0N9 B4E0N9 GLUD1;GLUD2 Glutamate dehydrogenase;Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.2701 2 530.270147 1058.52574 84707.73 0.015294 8.1097E-06 0.33527 0.00017779 0.35057 0.0001859 530.270127538054 535.27485522085 21.712 0.25922 21.712 21.571 21.83 0 27 9 5 0 0 0 0.049868 1 6246 38.086 38.086 1 0.15064 0.13047 0 1213200 1046700 166460 26490 941 9998 10272 41461 41461 NLPFDFTWK 9 1 0 Unmodified _NLPFDFTWK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.2952 2 584.295299 1166.57605 79324.62 0.66661 0.0003895 -0.1266 -7.3975E-05 0.54001 0.00031553 584.295215310275 588.302281671562 117.64 1.0642 117.64 117.29 118.36 7.6294E-06 378 66 8 0 0 0 0.010772 2 75266 58.981 35.025 1 1.3059 1.471 0 74405000 30186000 44219000 26491 1599 9999 10273 41462;41463 41462 NLPFDFTWK 9 1 0 Unmodified _NLPFDFTWK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.2955 2 584.295299 1166.57605 79668.34 0.68414 0.00039974 -0.24405 -0.0001426 0.44009 0.00025714 584.295107311813 588.302228487199 117.12 1.1984 117.12 116.67 117.87 0 370 74 8 0 0 0 0.012314 2 76588 57.59 37.803 1 1.3243 1.5142 0 158880000 71248000 87634000 26492 1599 9999 10273 41464;41465 41465 NLPFDFTWK 9 1 0 Unmodified _NLPFDFTWK_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 P52272 P52272 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.2957 2 584.295299 1166.57605 80022.13 0.82798 0.00048378 -0.03515 -2.0538E-05 0.79283 0.00046325 584.295265301207 588.302306599615 129.11 0.94987 129.11 128.75 129.7 1.5259E-05 165 39 8 0 0 0 0.026085 1 77143 47.603 35.076 1 0.99422 0.81091 0 6446300 3055100 3391200 26493 1599 9999 10273 41466 41466 NLPGLVQEGEPFSEEATLFTK 21 1 0 Unmodified _NLPGLVQEGEPFSEEATLFTK_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1158.0891 2 1153.58117 2305.14779 56420.91 0.13774 0.00015889 0.1355 0.00015631 0.27323 0.0003152 1154.08348792877 1158.09005374411 122.48 0.42938 122.48 122.28 122.71 0 213 31 9 0 0 0 1.2808E-07 3 79241 65.092 65.092 1 1.5135 1.6251 0 32743000 15134000 17609000 26494 618 10000 10274 41467;41468;41469 41467 NLPGLVQEGEPFSEEATLFTK 21 1 0 Unmodified _NLPGLVQEGEPFSEEATLFTK_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1158.0892 2 1153.58117 2305.14779 56409.23 0.33143 0.00038233 -0.22528 -0.00025988 0.10615 0.00012245 1153.58039972184 1158.08963114187 122.04 0.44705 122.04 121.79 122.24 7.6294E-06 200 31 9 0 0 0 3.8164E-09 2 80830 91.812 91.812 1 1.5239 1.6463 0 38387000 16258000 22128000 26495 618 10000 10274 41470;41471 41470 NLPIYSEEIVEMYK 14 1 0 Unmodified _NLPIYSEEIVEMYK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 868.939 2 864.431664 1726.84877 66896.61 0.73729 0.00063734 -0.36256 -0.00031341 0.37473 0.00032392 864.932646198139 868.438983386529 125.75 0.89253 125.75 125.38 126.27 0 140 37 6 0 0 0 0.032797 1 75441 30.336 30.336 1 2.9212 2.274 0 3719600 1015300 2704300 26496 81 10001 10275 41472 41472 NLPIYSEEIVEMYK 14 1 0 Unmodified _NLPIYSEEIVEMYK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 864.9325 2 864.431664 1726.84877 66430.97 0.51196 0.00044255 -0.32857 -0.00028403 0.18339 0.00015852 864.432129710478 868.439100191221 125.55 0.78664 125.55 125.2 125.99 0 141 35 7 0 0 0 0.062848 1 74509 23.749 18.256 1 3.598 2.8263 0 3831200 830300 3000900 26497 81 10001 10275 41473 41473 NLPLADQGSSHHITVK 16 1 0 Unmodified _NLPLADQGSSHHITVK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.973 3 572.972437 1715.89548 80324.11 0.86848 0.00049761 -0.32604 -0.00018681 0.54244 0.0003108 572.972411112556 575.643669949266 43.627 0.43391 43.627 43.404 43.838 0 136 37 5 0 0 0 8.9942E-05 1 23360 55.589 55.589 1 0.48728 0.51371 0 30818000 22423000 8394600 26498 1486 10002 10276 41474 41474 NLPLADQGSSHHITVK 16 1 0 Unmodified _NLPLADQGSSHHITVK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.9732 3 572.972437 1715.89548 NaN NaN NaN -0.012466 -7.1425E-06 NaN NaN NaN NaN 41.385 0.45009 41.385 41.117 41.567 0 0 0 0 7.5923E-05 1 22163 69.485 57.569 1 NaN NaN 0 16369000 16369000 0 26499 1486 10002 10276 41475 41475 NLPLADQGSSHHITVK 16 1 0 Unmodified _NLPLADQGSSHHITVK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.9725 3 572.972437 1715.89548 79852.31 0.17157 9.8306E-05 -0.039012 -2.2353E-05 0.13256 7.5954E-05 572.972588384578 575.977949217422 49.163 0.41166 49.163 48.964 49.375 0 116 33 5 0 0 0 0.052274 1 23379 14.959 14.959 1 0.53303 0.42238 0 2341600 1160300 1181400 26500 1486 10002 10276 41476 41476 NLPLPPPPPPR 11 0 1 Unmodified _NLPLPPPPPPR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;B3KU16 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.853 2 597.853316 1193.69208 78998.16 0.92071 0.00055045 -0.26546 -0.00015871 0.65524 0.00039174 597.853177988529 602.85718607522 80.362 1.7303 80.362 79.825 81.555 0 671 147 6 0 0 0 0.0037571 3 47745 59.245 37.781 1 1.562 1.7296 0 62452000 24335000 38116000 26501 102 10003 10277 41477;41478;41479 41477 NLPLPPPPPPR 11 0 1 Unmodified _NLPLPPPPPPR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;B3KU16 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.8536 2 597.853316 1193.69208 79221.02 0.8065 0.00048217 -0.11814 -7.0628E-05 0.68837 0.00041154 597.853225169152 602.857256859279 79.398 1.5972 79.398 78.719 80.316 0 648 131 7 0 0 0 0.0011873 3 48109 69.423 44.193 1 1.6245 1.8722 0 72851000 28498000 44353000 26502 102 10003 10277 41480;41481;41482 41480 NLPLPPPPPPR 11 0 1 Unmodified _NLPLPPPPPPR_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;B3KU16 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8582 2 597.853316 1193.69208 79769.14 0.64285 0.00038433 0.33687 0.0002014 0.97972 0.00058573 597.853410886651 602.857486982451 91.727 1.7678 91.727 91.014 92.782 0 402 108 6 0 0 0 0.035505 2 51293 36.693 22.098 1 1.1436 0.96746 0 4933500 2750500 2182900 26503 102 10003 10277 41483;41484 41484 NLPNVIINEK 10 1 0 Unmodified _NLPNVIINEK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.3325 2 577.332413 1152.65027 79849.02 0.47596 0.00027479 0.099772 5.7602E-05 0.57574 0.00033239 577.33233040802 581.339597955975 76.668 1.1254 76.668 76.288 77.413 0 377 96 6 0 0 0 0.0035438 2 45069 64.04 41.3 1 1.0078 1.0965 0 48372000 24819000 23553000 26504 2008 10004 10278 41485;41486 41486 NLPNVIINEK 10 1 0 Unmodified _NLPNVIINEK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3329 2 577.332413 1152.65027 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.787 1 75.787 75.287 76.287 0 0 0 0 0.021773 1 45700 53.327 29.899 1 26505 2008 10004 10278 41487 41487 NLPNVIINEK 10 1 0 Unmodified _NLPNVIINEK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.3389 2 577.332413 1152.65027 79559.78 0.4402 0.00025414 -0.043729 -2.5246E-05 0.39647 0.00022889 577.332479593204 581.339403800791 87.565 1.7202 87.565 87.186 88.907 0 286 106 4 0 0 0 0.010142 3 48030 53.756 34.662 1 1.4994 1.1623 0 13645000 5801400 7843200 26506 2008 10004 10278 41488;41489;41490 41488 NLPNVIINEK 10 1 0 Unmodified _NLPNVIINEK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.3396 2 577.332413 1152.65027 77988.98 0.41804 0.00024135 0.81754 0.00047199 1.2356 0.00071334 577.33256251066 581.339579078834 87.546 1.4874 87.546 87.069 88.557 0 352 84 7 0 0 0 0.0088235 2 47225 55.549 40.399 1 1.5103 1.2319 0 12806000 4999600 7806400 26507 2008 10004 10278 41491;41492 41491 NLPYTSTEEDLEK 13 1 0 Unmodified _NLPYTSTEEDLEK_ 0 0 0 Q9Y4C8 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.3738 2 769.864668 1537.71478 NaN NaN NaN -0.10736 -8.2654E-05 NaN NaN NaN NaN 66.878 0.35903 66.878 66.729 67.088 0 0 0 0 0.012343 1 38527 51.927 20.853 1 NaN NaN 0 3162900 0 3162900 26508 2145 10005 10279 41493 41493 NLPYTSTEEDLEK 13 1 0 Unmodified _NLPYTSTEEDLEK_ 0 0 0 Q9Y4C8 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.8649 2 769.864668 1537.71478 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.821 1 66.821 66.321 67.321 0 0 0 0 0.021465 1 38580 46.592 30.93 1 26509 2145 10005 10279 41494 41494 NLPYTSTEEDLEK 13 1 0 Unmodified _NLPYTSTEEDLEK_ 0 0 0 Q9Y4C8 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.8663 2 769.864668 1537.71478 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.836 1 66.836 66.336 67.336 0 0 0 0 0.0017486 1 38589 69.979 43.381 1 26510 2145 10005 10279 41495 41495 NLPYVYIPSK 10 1 0 Unmodified _NLPYVYIPSK_ 0 0 0 Q9NX24;D6RC52;D6RCB9;H0YC83 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.3395 2 597.331882 1192.64921 77720.15 0.79878 0.00047713 0.35516 0.00021215 1.1539 0.00068928 597.331780878827 601.339140476225 93.642 0.96184 93.642 93.1 94.061 0 460 83 8 0 0 0 0.0038105 2 56676 62.823 62.823 1 0.70063 0.78919 0 124300000 75776000 48526000 26511 2077 10006 10280 41496;41497 41496 NLQCLVIDEADR 12 0 1 Unmodified _NLQCLVIDEADR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.8657 2 723.35629 1444.69803 70757.73 0.77883 0.00056337 1.1197 0.00080992 1.8985 0.0013733 723.355755970753 728.864376540917 84.076 0.73504 84.076 83.864 84.599 0 229 60 6 0 0 0 0.0001724 1 51594 91.549 81.178 1 1.1726 1.3462 0 79454000 30645000 48808000 26512 303 10007 10281 41498 41498 NLQCLVIDEADR 12 0 1 Unmodified _NLQCLVIDEADR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.3568 2 723.35629 1444.69803 70603.73 0.81595 0.00059022 -0.2399 -0.00017353 0.57605 0.00041669 723.35614352559 728.360523422231 97.469 1.293 97.469 97.226 98.519 0 426 79 10 0 0 0 2.3371E-08 2 54820 120.09 90.827 1 1.4823 1.2598 0 34187000 12846000 21341000 26513 303 10007 10281 41499;41500 41500 NLQCLVIDEADR 12 0 1 Unmodified _NLQCLVIDEADR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.3563 2 723.35629 1444.69803 70801.59 0.53084 0.00038398 -0.10207 -7.3836E-05 0.42876 0.00031015 723.356201903388 728.360784544196 97.341 1.1763 97.341 97.15 98.326 -7.6294E-06 403 66 10 0 0 0 6.5446E-18 2 53937 143.61 107.67 1 1.4461 1.2614 0 30314000 11424000 18890000 26514 303 10007 10281 41501;41502 41502 NLQDVVER 8 0 1 Unmodified _NLQDVVER_ 0 0 0 P49916;B7Z6I3;K7ERZ5;K7EQB6 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7587 2 486.759081 971.503609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.207 1 42.207 41.707 42.707 -3.8147E-06 0 0 0 0.01034 1 22729 76.478 17.873 1 26515 1589 10008 10282 41503 41503 NLQEAEEWYK 10 1 0 Unmodified _NLQEAEEWYK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8;H7C5W5;B3KWQ6;P41219;F8W835 V9HWE1 V9HWE1 HEL113;VIM;PRPH Vimentin;Peripherin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3074 2 655.306592 1308.59863 75146.15 0.88522 0.00058009 0.010662 6.9869E-06 0.89588 0.00058708 655.306720175774 659.313530079912 67.922 1.1741 67.922 67.628 68.802 0 476 102 8 0 0 0 1.7258E-12 2 39330 148.52 140.88 1 1.4471 1.64 0 92324000 37334000 54991000 26516 1457 10009 10283 41504;41505 41505 NLQEAEEWYK 10 1 0 Unmodified _NLQEAEEWYK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8;H7C5W5;B3KWQ6;P41219;F8W835 V9HWE1 V9HWE1 HEL113;VIM;PRPH Vimentin;Peripherin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.3077 2 655.306592 1308.59863 75273.11 0.64245 0.000421 0.077457 5.0758E-05 0.7199 0.00047176 655.306653472528 659.313489932774 66.715 1.1472 66.715 66.376 67.523 7.6294E-06 520 95 8 0 0 0 2.4698E-05 2 39397 99.802 99.802 1 1.3824 1.5453 0 100500000 44405000 56100000 26517 1457 10009 10283 41506;41507 41506 NLQEAEEWYK 10 1 0 Unmodified _NLQEAEEWYK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8;H7C5W5;B3KWQ6;P41219;F8W835 V9HWE1 V9HWE1 HEL113;VIM;PRPH Vimentin;Peripherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.3137 2 655.306592 1308.59863 74829.27 0.63308 0.00041486 0.0048673 3.1895E-06 0.63794 0.00041805 655.306359059341 659.313647772197 78.206 1.124 78.206 77.898 79.022 0 337 70 7 0 0 0 0.00095587 2 41852 78.516 74.929 1 3.5243 2.738 0 12642000 2680800 9961400 26518 1457 10009 10283 41508;41509 41509 NLQEAEEWYK 10 1 0 Unmodified _NLQEAEEWYK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8;H7C5W5;B3KWQ6;P41219;F8W835 V9HWE1 V9HWE1 HEL113;VIM;PRPH Vimentin;Peripherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.3138 2 655.306592 1308.59863 74867.93 0.6044 0.00039607 0.10141 6.6455E-05 0.70581 0.00046252 655.306613500315 659.313716565145 78.575 1.1675 78.575 78.277 79.445 0 341 73 7 0 0 0 0.057893 1 41775 35.224 35.224 1 3.6817 3.0425 0 11702000 2663300 9038600 26519 1457 10009 10283 41510 41510 NLQEFLGGLSPGVLDR 16 0 1 Unmodified _NLQEFLGGLSPGVLDR_ 0 0 0 B4DNU0;Q53HH3;Q92759;A0A0G2JHJ2 B4DNU0 B4DNU0 GTF2H4 General transcription factor IIH subunit 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.9572 2 857.959768 1713.90498 NaN NaN NaN -0.7203 -0.00061799 NaN NaN NaN NaN 123.17 0.70103 123.17 122.84 123.54 7.6294E-06 0 0 0 0.045395 1 81595 47.189 27.53 1 NaN NaN 0 57533000 57533000 0 26520 1016 10010 10284 41511 41511 NLQEGNEVDSQSSIR 15 0 1 Unmodified _NLQEGNEVDSQSSIR_ 0 0 0 B4DLG2;O75152;E9PQ61 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.9036 2 838.397729 1674.78091 NaN NaN NaN -0.017505 -1.4676E-05 NaN NaN NaN NaN 36.822 0.31586 36.822 36.633 36.949 0 0 0 0 4.8499E-05 1 18595 83.182 68.21 1 NaN NaN 0 3884200 0 3884200 26521 996 10011 10285 41512 41512 NLQEGNEVDSQSSIR 15 0 1 Unmodified _NLQEGNEVDSQSSIR_ 0 0 0 B4DLG2;O75152;E9PQ61 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.4008 2 838.397729 1674.78091 66964.87 0.64834 0.00054357 -0.16147 -0.00013537 0.48687 0.00040819 838.397857192402 843.40148907026 35.983 0.32815 35.983 35.814 36.143 0 85 27 6 0 0 0 6.7171E-22 1 18374 169.23 160.71 1 1.8096 1.8111 0 11400000 4588800 6811000 26522 996 10011 10285 41513 41513 NLQEIQQAGER 11 0 1 Unmodified _NLQEIQQAGER_ 0 0 0 Q8N1F7;A8K897;H3BVG0;H3BV11;H3BRI8;H3BM93 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.3329 2 643.32839 1284.64223 76352.58 0.67951 0.00043715 -0.39751 -0.00025573 0.282 0.00018142 643.32879621731 648.332226945437 35.148 0.40171 35.148 34.922 35.324 3.8147E-06 90 35 5 0 0 0 6.7214E-10 3 17625 127.4 56.301 1 1.926 1.9813 0 10167000 3327100 6840000 26523 1904 10012 10286 41514;41515;41516 41514 NLQEIQQAGER 11 0 1 Unmodified _NLQEIQQAGER_ 0 0 0 Q8N1F7;A8K897;H3BVG0;H3BV11;H3BRI8;H3BM93 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.3283 2 643.32839 1284.64223 NaN NaN NaN -0.15162 -9.7538E-05 NaN NaN NaN NaN 34.303 0.16015 34.303 34.2 34.36 0 0 0 0 9.9605E-12 1 17383 121.73 45.669 1 NaN NaN 0 5423900 5423900 0 26524 1904 10012 10286 41517 41517 NLQEIQQAGER 11 0 1 Unmodified _NLQEIQQAGER_ 0 0 0 Q8N1F7;A8K897;H3BVG0;H3BV11;H3BRI8;H3BM93 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.3307 2 643.32839 1284.64223 78559.84 0.44444 0.00028592 -0.13946 -8.9717E-05 0.30499 0.00019621 643.329246743186 648.832335766935 40.369 0.28063 40.369 40.215 40.496 0 48 19 4 0 0 0 0.046519 1 18613 35.178 13.185 1 1.2291 1.0867 0 1123300 555140 568110 26525 1904 10012 10286 41518 41518 NLQEQVMAVTAQVK 14 1 0 Oxidation (M) _NLQEQVM(ox)AVTAQVK_ NLQEQVM(1)AVTAQVK NLQEQVM(90.65)AVTAQVK 0 1 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.4216 2 787.913972 1573.81339 67545.16 0.85076 0.00067033 0.21203 0.00016706 1.0628 0.00083739 787.914507483409 791.921165076845 84.812 0.60435 84.812 84.593 85.197 0 215 49 5 0 0 0 3.1954E-05 1 50781 90.653 75.681 1 1.007 1.0925 0 45353000 23226000 22127000 26526 1927 10013 10287 41519 41519 1760 NLQEQVMAVTAQVK 14 1 0 Oxidation (M) _NLQEQVM(ox)AVTAQVK_ NLQEQVM(1)AVTAQVK NLQEQVM(76.33)AVTAQVK 0 1 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 787.9141 2 787.913972 1573.81339 69508 0.62065 0.00048902 0.16249 0.00012803 0.78314 0.00061705 787.914218155354 791.921297455189 98.03 0.726 98.03 97.647 98.373 7.6294E-06 224 47 6 0 0 0 7.3938E-05 1 55219 76.326 59.694 1 0.6809 0.54456 0 8840300 4629800 4210500 26527 1927 10013 10287 41520 41520 1760 NLQEQVMAVTAQVK 14 1 0 Oxidation (M) _NLQEQVM(ox)AVTAQVK_ NLQEQVM(1)AVTAQVK NLQEQVM(66.54)AVTAQVK 0 1 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.395 2 787.913972 1573.81339 69560.59 0.6685 0.00052672 0.038046 2.9977E-05 0.70655 0.0005567 787.914056318237 791.921154737181 98.002 0.68978 98.002 97.616 98.306 0 209 42 7 0 0 0 0.0008175 1 54345 66.538 51.847 1 0.65425 0.5339 0 6331800 3962100 2369700 26528 1927 10013 10287 41521 41521 1760 NLQEQVMAVTAQVK 14 1 0 Unmodified _NLQEQVMAVTAQVK_ 0 0 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.9249 2 779.916515 1557.81848 69088.63 0.93246 0.00072724 -0.22247 -0.00017351 0.70998 0.00055373 779.914977835447 784.425532815218 111.51 0.42303 111.51 111.3 111.72 0 72 20 6 0 0 0 1.5997E-06 2 64661 107.97 92.994 1 1.3688 1.069 0 3802500 1564600 2237900 26529 1927 10013 10288 41522;41523 41523 NLQEQVMAVTAQVK 14 1 0 Unmodified _NLQEQVMAVTAQVK_ 0 0 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.4248 2 779.916515 1557.81848 69855.27 0.64855 0.00050581 0.23924 0.00018659 0.88779 0.0006924 779.915654623979 783.92401005944 111.43 0.42721 111.43 111.13 111.56 -7.6294E-06 65 20 6 0 0 0 0.0015445 1 63597 52.928 46.688 1 1.3008 1.0273 0 3924400 1901300 2023200 26530 1927 10013 10288 41524 41524 NLQLFMENK 9 1 0 Oxidation (M) _NLQLFM(ox)ENK_ NLQLFM(1)ENK NLQLFM(105.57)ENK 0 1 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.2986 2 576.789524 1151.56449 78574.44 0.65122 0.00037562 0.096332 5.5563E-05 0.74756 0.00043118 576.789363480774 580.796817520464 67.646 1.8017 67.646 66.819 68.621 7.6294E-06 647 145 8 0 0 0 0.00010955 5 38977 105.57 68.547 1 1.4937 1.7006 0 170080000 64667000 105420000 26531 1470 10014 10289 41525;41526;41527;41528;41529 41525 1189 NLQLFMENK 9 1 0 Oxidation (M) _NLQLFM(ox)ENK_ NLQLFM(1)ENK NLQLFM(59.25)ENK 0 1 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.2925 2 576.789524 1151.56449 79774.49 0.45557 0.00026277 -1.0916 -0.00062962 -0.63603 -0.00036686 576.787765941812 580.796204614098 68.921 0.80345 68.921 68.547 69.35 7.6294E-06 161 66 4 0 0 0 0.0050768 1 39835 59.245 28.741 1 1.7636 1.864 0 15585000 5719500 9866000 26532 1470 10014 10289 41530 41530 1189 NLQLFMENK 9 1 0 Oxidation (M) _NLQLFM(ox)ENK_ NLQLFM(1)ENK NLQLFM(126.41)ENK 0 1 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.7893 2 576.789524 1151.56449 78883.2 0.66457 0.00038332 -0.18774 -0.00010829 0.47683 0.00027503 576.789259800899 580.796636826787 66.453 1.5345 66.453 65.903 67.438 -7.6294E-06 585 124 8 0 0 0 5.1984E-06 3 39218 126.41 90.532 1 1.5136 1.7349 0 165360000 64523000 100840000 26533 1470 10014 10289 41531;41532;41533 41532 1189 NLQLFMENK 9 1 0 Oxidation (M) _NLQLFM(ox)ENK_ NLQLFM(1)ENK NLQLFM(74.49)ENK 0 1 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.7968 2 576.789524 1151.56449 78866.88 0.33439 0.00019287 0.17071 9.8466E-05 0.5051 0.00029134 576.789491949561 580.796654803226 77.304 1.5161 77.304 76.811 78.327 -7.6294E-06 471 100 7 0 0 0 0.0011516 2 41284 74.486 47.884 1 1.0417 0.80731 0 13539000 7022700 6516000 26534 1470 10014 10289 41534;41535 41534 1189 NLQLFMENK 9 1 0 Oxidation (M) _NLQLFM(ox)ENK_ NLQLFM(1)ENK NLQLFM(84.5)ENK 0 1 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.7897 2 576.789524 1151.56449 77175.35 0.45427 0.00026202 0.91769 0.00052931 1.372 0.00079133 576.789421988627 580.796672846609 77.603 1.4627 77.603 77.074 78.536 0 453 94 10 0 0 0 0.00073054 2 40687 84.498 53.208 1 0.99957 0.81631 0 12721000 6594800 6126600 26535 1470 10014 10289 41536;41537 41537 1189 NLQLFMENK 9 1 0 Oxidation (M) _NLQLFM(ox)ENK_ NLQLFM(1)ENK NLQLFM(52.87)ENK 0 1 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.7966 2 576.789524 1151.56449 79847.54 0.58378 0.00033672 -0.51791 -0.00029873 0.065871 3.7993E-05 576.789033902845 580.796485566786 94.219 1.5398 94.219 93.603 95.142 -7.6294E-06 400 102 9 0 0 0 0.0085023 1 51775 52.867 32.307 1 1.4903 1.2237 0 5229600 2197100 3032500 26536 1470 10014 10289 41538 41538 1189 NLQLFMENK 9 1 0 Unmodified _NLQLFMENK_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.7923 2 568.792066 1135.56958 80276.55 0.873 0.00049656 0.61427 0.00034939 1.4873 0.00084595 568.792185306413 572.799931055382 82.844 0.74219 82.844 82.433 83.176 0 235 61 5 0 0 0 0.00034217 1 49547 101.43 77.276 1 0.89553 0.88472 0 25536000 12822000 12714000 26537 1470 10014 10290 41539 41539 NLQLFMENK 9 1 0 Unmodified _NLQLFMENK_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.7924 2 568.792066 1135.56958 80025.46 0.61008 0.00034701 -0.12009 -6.8307E-05 0.48999 0.0002787 568.791931328891 572.799150120337 94.382 1.1744 94.382 93.795 94.97 0 399 77 8 0 0 0 0.017549 2 52649 52.867 28.712 1 1.6734 1.3051 0 12140000 4404000 7735900 26538 1470 10014 10290 41540;41541 41541 NLQLFMENK 9 1 0 Unmodified _NLQLFMENK_ 0 0 0 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061 P11387 P11387 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.7993 2 568.792066 1135.56958 80514.75 0.62449 0.0003552 0.018244 1.0377E-05 0.64273 0.00036558 568.792043049736 572.799203890291 94.222 1.334 94.222 93.685 95.019 0 429 86 8 0 0 0 0.024698 3 51646 48.157 32.495 1 1.7585 1.4513 0 11245000 4171000 7074400 26539 1470 10014 10290 41542;41543;41544 41542 NLQLFMENKQPEDDLFDR 18 1 1 Oxidation (M) _NLQLFM(ox)ENKQPEDDLFDR_ NLQLFM(1)ENKQPEDDLFDR NLQLFM(44.38)ENKQPEDDLFDR 0 1 1 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.0259 3 756.691559 2267.05285 69411.51 0.88546 0.00067002 -0.088778 -6.7177E-05 0.79668 0.00060284 757.025655289374 763.033581579186 111.3 0.70625 111.3 111.03 111.74 0 237 32 10 0 0 0 0.00012496 1 64405 44.382 44.382 1 0.8913 0.77686 0 21557000 11196000 10362000 26540 1470 10015 10291 41545 41545 1189 NLQLFMENKQPEDDLFDR 18 1 1 Unmodified _NLQLFMENKQPEDDLFDR_ 0 0 1 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.6962 3 751.359921 2251.05793 68996.74 0.80972 0.00060839 0.24314 0.00018268 1.0529 0.00079107 751.694178902439 757.368381861467 117.54 0.76422 117.54 117.31 118.07 0 199 34 10 0 0 0 3.0493E-06 2 69211 62.475 57.382 1 1.6078 1.3793 0 10924000 4184800 6739400 26541 1470 10015 10292 41546;41547 41547 NLQLFMENKQPEDDLFDR 18 1 1 Unmodified _NLQLFMENKQPEDDLFDR_ 0 0 1 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.3643 3 751.359921 2251.05793 NaN NaN NaN 0.61185 0.00045972 NaN NaN NaN NaN 117.4 0.61551 117.4 117.17 117.78 0 0 0 0 0.034018 1 68148 24.594 15.652 1 NaN NaN 0 3976500 3976500 0 26542 1470 10015 10292 41548 41548 NLQNLLILTAIK 12 1 0 Unmodified _NLQNLLILTAIK_ 0 0 0 A0A087WVQ6;Q00610;A0A087WX41;P53675 A0A087WVQ6 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.4348 2 677.426845 1352.83914 76088.13 0.78973 0.00053498 -0.36539 -0.00024752 0.42434 0.00028746 677.42663787028 681.433543913223 125.17 0.56412 125.17 124.96 125.52 -7.6294E-06 94 36 4 0 0 0 0.00073439 1 81392 66.595 66.595 1 2.167 2.2 0 4617400 1558800 3058600 26543 419 10016 10293 41549 41549 NLQNLLILTAIK 12 1 0 Unmodified _NLQNLLILTAIK_ 0 0 0 A0A087WVQ6;Q00610;A0A087WX41;P53675 A0A087WVQ6 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.4342 2 677.426845 1352.83914 77148.6 1.0306 0.00069814 -0.23651 -0.00016022 0.79407 0.00053792 677.426626408001 681.433630295005 124.72 0.49893 124.72 124.47 124.97 7.6294E-06 117 33 5 0 0 0 0.0033141 1 83096 56.359 56.359 1 2.2055 2.2583 0 5021300 1817800 3203500 26544 419 10016 10293 41550 41550 NLQQELETQNQK 12 1 0 Unmodified _NLQQELETQNQK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.8787 2 736.870619 1471.72669 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.958 1 40.958 40.458 41.458 0 0 0 0 1.6969E-47 1 21969 179.1 106.55 1 26545 1312 10017 10294 41551 41551 NLQQELETQNQK 12 1 0 Unmodified _NLQQELETQNQK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.8726 2 736.870619 1471.72669 71388.24 0.47546 0.00035035 0.48089 0.00035435 0.95635 0.0007047 736.871032970422 740.877945112545 48.945 0.52855 48.945 48.663 49.192 0 173 41 6 0 0 0 2.3054E-05 3 23877 101.97 101.97 1 1.5873 1.2579 0 4213800 1500700 2713100 26546 1312 10017 10294 41552;41553;41554 41553 NLQQELETQNQK 12 1 0 Unmodified _NLQQELETQNQK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.8779 2 736.870619 1471.72669 72211.88 0.37096 0.00027335 0.14134 0.00010415 0.5123 0.0003775 736.870869291806 740.877923932945 49.371 0.64869 49.371 49.1 49.748 3.8147E-06 202 49 6 0 0 0 0.00022611 2 23494 85.355 85.355 1 1.6078 1.314 0 4752500 1831600 2920900 26547 1312 10017 10294 41555;41556 41555 NLQSFGTEEPAYSTR 15 0 1 Unmodified _NLQSFGTEEPAYSTR_ 0 0 0 O95251 O95251 O95251 KAT7 Histone acetyltransferase KAT7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.4023 2 850.399741 1698.78493 65989.2 0.89899 0.0007645 -0.36708 -0.00031217 0.53191 0.00045233 850.399471197398 855.403932301185 65.659 0.90072 65.659 65.191 66.092 0 258 83 6 0 0 0 0.0002248 2 37698 71.176 58.962 1 0.59507 0.6065 0 18638000 12510000 6127700 26548 1422 10018 10295 41557;41558 41557 NLQSFGTEEPAYSTR 15 0 1 Unmodified _NLQSFGTEEPAYSTR_ 0 0 0 O95251 O95251 O95251 KAT7 Histone acetyltransferase KAT7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.4041 2 850.399741 1698.78493 66418.55 0.60536 0.00051479 -0.47311 -0.00040233 0.13225 0.00011247 850.399643426504 855.403745718673 64.53 0.98688 64.53 63.911 64.898 0 337 89 8 0 0 0 0.00022652 4 37828 73.848 64.526 1 0.6076 0.63791 0 22952000 14425000 8527600 26549 1422 10018 10295 41559;41560;41561;41562 41560 NLQSFGTEEPAYSTR 15 0 1 Unmodified _NLQSFGTEEPAYSTR_ 0 0 0 O95251 O95251 O95251 KAT7 Histone acetyltransferase KAT7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 855.4059 2 850.399741 1698.78493 65459.8 0.6657 0.00056611 0.080599 6.8541E-05 0.7463 0.00063466 850.400697958629 855.403856096811 75.503 0.71608 75.503 75.238 75.954 -7.6294E-06 212 49 7 0 0 0 0.0096986 1 40088 35.204 31.672 1 1.2629 1.083 0 8513200 3635200 4878000 26550 1422 10018 10295 41563 41563 NLQSFGTEEPAYSTR 15 0 1 Unmodified _NLQSFGTEEPAYSTR_ 0 0 0 O95251 O95251 O95251 KAT7 Histone acetyltransferase KAT7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 855.4045 2 850.399741 1698.78493 64470.3 0.50369 0.00042834 0.3257 0.00027698 0.8294 0.00070532 850.40061236275 855.403969944932 75.98 0.64438 75.98 75.679 76.323 0 218 42 7 0 0 0 0.0034306 1 39556 42.095 36.124 1 1.1196 0.93395 0 6504400 3093700 3410700 26551 1422 10018 10295 41564 41564 NLQTYLQEEDTR 12 0 1 Unmodified _NLQTYLQEEDTR_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.8469 2 755.362627 1508.7107 71938.88 0.5033 0.00038018 0.1933 0.00014601 0.69661 0.00052619 755.362268113894 760.367414964022 67.721 0.70604 67.721 67.523 68.229 0 153 60 6 0 0 0 0.0086834 1 40125 67.726 67.726 1 0.88304 0.87267 0 15104000 6091800 9012300 26552 1843 10019 10296 41565 41565 NLQTYLQEEDTR 12 0 1 Unmodified _NLQTYLQEEDTR_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 760.3654 2 755.362627 1508.7107 69678.05 0.54969 0.00041522 -0.99334 -0.00075033 -0.44364 -0.00033511 755.361792723168 760.365317424266 79.739 0.95632 79.739 79.071 80.027 0 172 58 5 0 0 0 0.053517 1 43022 32.062 32.062 1 1.1091 0.9292 0 4025800 1691900 2333900 26553 1843 10019 10296 41566 41566 NLQTYLQEEDTR 12 0 1 Unmodified _NLQTYLQEEDTR_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 755.3622 2 755.362627 1508.7107 69448.14 0.44644 0.00033722 -0.84447 -0.00063788 -0.39803 -0.00030065 755.362154839319 760.365291803997 80.047 1.0947 80.047 79.307 80.401 7.6294E-06 164 65 6 0 0 0 0.0048714 1 42350 52.391 52.391 1 0.9287 0.81838 0 4116200 2287500 1828700 26554 1843 10019 10296 41567 41567 NLQYYDISAK 10 1 0 Unmodified _NLQYYDISAK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.814 2 607.806228 1213.5979 78578.34 0.44238 0.00026888 -0.033344 -2.0267E-05 0.40903 0.00024861 607.806267941422 611.813187063576 63.291 1.1032 63.291 62.825 63.928 0 514 108 7 0 0 0 0.00050835 4 36159 85.731 52.26 1 2.1295 2.4088 0 103040000 30920000 72118000 26555 1082 10020 10297 41568;41569;41570;41571 41569 NLQYYDISAK 10 1 0 Unmodified _NLQYYDISAK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.8057 2 607.806228 1213.5979 78118.06 0.43864 0.00026661 -0.017407 -1.058E-05 0.42123 0.00025603 607.806180856246 611.813205875176 62.174 1.1558 62.174 61.661 62.817 3.8147E-06 519 107 7 0 0 0 0.00057758 4 36243 84.615 47.107 1 2.0447 2.3028 0 69487000 24819000 44667000 26556 1082 10020 10297 41572;41573;41574;41575 41574 NLQYYDISAK 10 1 0 Unmodified _NLQYYDISAK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.8142 2 607.806228 1213.5979 78460.73 0.47846 0.00029081 0.28925 0.00017581 0.76771 0.00046662 607.806335830816 611.813368989249 73.2 1.4299 73.2 72.685 74.114 0 517 99 8 0 0 0 0.022046 1 38447 46.001 26.215 1 1.3431 1.0458 0 12353000 5222700 7129900 26557 1082 10020 10297 41576 41576 NLQYYDISAK 10 1 0 Unmodified _NLQYYDISAK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.8074 2 607.806228 1213.5979 78207.86 0.44469 0.00027028 0.38816 0.00023592 0.83284 0.00050621 607.806320683181 611.813385845507 73.747 1.6049 73.747 73.2 74.805 0 557 106 8 0 0 0 0.0078188 2 38035 56.916 32.761 1 1.3503 1.1109 0 10222000 4197900 6024200 26558 1082 10020 10297 41577;41578 41578 NLSELQDTSLQQLVSQR 17 0 1 Unmodified _NLSELQDTSLQQLVSQR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.0186 2 980.010718 1958.00688 61720.94 0.77443 0.00075895 -0.19095 -0.00018713 0.58348 0.00057182 980.511774839766 985.014955134111 108.54 0.67486 108.54 108.28 108.95 -7.6294E-06 326 47 10 0 0 0 4.6823E-57 2 67691 177.38 177.38 1 0.88287 0.99735 0 101870000 56307000 45565000 26559 1813 10021 10298 41579;41580 41580 NLSELQDTSLQQLVSQR 17 0 1 Unmodified _NLSELQDTSLQQLVSQR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 980.0119 2 980.010718 1958.00688 61747.07 0.36026 0.00035306 -0.070927 -6.9509E-05 0.28933 0.00028355 980.010552414777 985.015086194007 107.99 0.76112 107.99 107.69 108.45 7.6294E-06 331 54 10 0 0 0 2.2497E-81 3 68911 202.13 202.13 1 0.82458 0.93946 0 104110000 58540000 45574000 26560 1813 10021 10298 41581;41582;41583 41581 NLSELQDTSLQQLVSQR 17 0 1 Unmodified _NLSELQDTSLQQLVSQR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 985.5178 2 980.010718 1958.00688 61840.54 0.27285 0.00026739 0.2012 0.00019717 0.47404 0.00046457 980.512953482189 985.015376864938 119.96 0.95402 119.96 119.67 120.62 0 270 44 10 0 0 0 3.0317E-10 2 71093 112.15 112.15 1 1.4645 1.2595 0 47755000 19212000 28544000 26561 1813 10021 10298 41584;41585 41585 NLSELQDTSLQQLVSQR 17 0 1 Unmodified _NLSELQDTSLQQLVSQR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 980.5132 2 980.010718 1958.00688 61902.05 0.33668 0.00032995 -0.27388 -0.0002684 0.062801 6.1545E-05 980.01099347945 985.015027731516 119.8 0.60466 119.8 119.49 120.1 7.6294E-06 189 25 10 0 0 0 2.1131E-111 2 70027 238.43 238.43 1 1.3811 1.2054 0 78011000 32789000 45221000 26562 1813 10021 10298 41586;41587 41586 NLSFFLTPPCAR 12 0 1 Unmodified _NLSFFLTPPCAR_ 0 0 0 J3KPM9;P42224 J3KPM9 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.8681 2 711.863554 1421.71256 NaN NaN NaN -0.74959 -0.00053361 NaN NaN NaN NaN 113.44 0.40033 113.44 113.25 113.65 0 0 0 0 0.0053565 1 71781 62.303 42.516 1 NaN NaN 0 3021500 0 3021500 26563 1326 10022 10299 41588 41588 NLSFFLTPPCAR 12 0 1 Unmodified _NLSFFLTPPCAR_ 0 0 0 J3KPM9;P42224 J3KPM9 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.8673 2 711.863554 1421.71256 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.81 1 112.81 112.31 113.31 0 0 0 0 0.0046216 1 73074 64.82 49.191 1 26564 1326 10022 10299 41589 41589 NLSFNELYPSGTLK 14 1 0 Unmodified _NLSFNELYPSGTLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.9173 2 791.909213 1581.80387 67760.82 0.73653 0.00058326 0.54502 0.00043161 1.2816 0.0010149 791.910570025549 795.916258418714 104.94 0.58611 104.94 104.65 105.24 -7.6294E-06 167 47 5 0 0 0 0.0009718 1 64750 57.019 57.019 1 2.006 1.9779 0 24716000 8091800 16625000 26565 1945 10023 10300 41590 41590 NLSFNELYPSGTLK 14 1 0 Unmodified _NLSFNELYPSGTLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.9172 2 791.909213 1581.80387 67033.92 0.81934 0.00064884 0.21532 0.00017051 1.0347 0.00081935 791.910043013374 795.916136509166 104.2 0.59064 104.2 103.94 104.53 0 202 48 7 0 0 0 6.5745E-05 2 65840 90.685 83.107 1 1.8252 1.9515 0 23064000 7863300 15201000 26566 1945 10023 10300 41591;41592 41591 NLSFNELYPSGTLK 14 1 0 Unmodified _NLSFNELYPSGTLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.9174 2 791.909213 1581.80387 68356.39 0.4475 0.00035438 0.44686 0.00035388 0.89437 0.00070826 792.410976460068 795.916503252636 116.57 0.65247 116.57 116.29 116.94 0 155 25 11 0 0 0 2.039E-06 2 68536 106.67 97.663 1 3.0957 2.4927 0 22061000 5805400 16256000 26567 1945 10023 10300 41593;41594 41594 NLSFNELYPSGTLK 14 1 0 Unmodified _NLSFNELYPSGTLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 795.9173 2 791.909213 1581.80387 68544.38 0.93504 0.00074047 0.21632 0.0001713 1.1514 0.00091177 792.411027281465 795.916293761646 116.36 0.80301 116.36 115.98 116.79 0 174 37 10 0 0 0 3.6332E-06 2 67544 101.95 87.535 1 3.245 2.6039 0 22084000 4996200 17088000 26568 1945 10023 10300 41595;41596 41596 NLSPGAVESDVR 12 0 1 Unmodified _NLSPGAVESDVR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.3181 2 622.317491 1242.62043 79312.63 0.63819 0.00039716 0.10637 6.6196E-05 0.74456 0.00046335 622.317727345787 627.322061933443 53.723 0.57491 53.723 53.381 53.956 0 164 44 6 0 0 0 0.00016719 2 30062 91.855 62.768 1 1.7753 1.8613 0 39307000 15208000 24098000 26569 1607 10024 10301 41597;41598 41598 NLSPGAVESDVR 12 0 1 Unmodified _NLSPGAVESDVR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3224 2 622.317491 1242.62043 76645.56 0.68247 0.00042471 0.28879 0.00017972 0.97126 0.00060443 622.317851561265 627.321871907045 52.636 0.59446 52.636 52.291 52.886 3.8147E-06 155 46 5 0 0 0 0.00011875 2 30000 94.692 68.308 1 1.8369 2.0038 0 29715000 10807000 18908000 26570 1607 10024 10301 41599;41600 41599 NLSQEIIELLK 11 1 0 Unmodified _NLSQEIIELLK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.3868 2 650.37956 1298.74457 74641.05 0.93136 0.00060573 0.068716 4.4691E-05 1.0001 0.00065043 650.881162646673 654.386462546289 128.27 0.62899 128.27 127.95 128.58 0 167 42 6 0 0 0 0.00011828 1 83502 96.342 86.984 1 1.1716 1.1482 0 21188000 6200000 14988000 26571 1412 10025 10302 41601 41601 NLSQEIIELLK 11 1 0 Unmodified _NLSQEIIELLK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.3795 2 650.37956 1298.74457 75425.02 1.1164 0.0007261 0.66517 0.00043261 1.7816 0.0011587 650.379887701831 654.386885515867 127.84 0.72543 127.84 127.45 128.18 0 137 44 6 0 0 0 2.4636E-08 2 85257 121.5 121.5 1 1.2646 1.4471 0 161000000 71316000 89688000 26572 1412 10025 10302 41602;41603 41603 NLSSNEAISLEEIR 14 0 1 Unmodified _NLSSNEAISLEEIR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.4064 2 787.904659 1573.79476 67595.43 0.71378 0.00056239 -0.19005 -0.00014974 0.52373 0.00041265 787.904760162736 792.908793553323 87.994 0.81895 87.994 87.587 88.406 0 322 71 7 0 0 0 2.659E-11 2 52953 153.34 153.34 1 0.61557 0.66501 0 48654000 27619000 21035000 26573 1665 10026 10303 41604;41605 41605 NLSSNEAISLEEIR 14 0 1 Unmodified _NLSSNEAISLEEIR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.4109 2 787.904659 1573.79476 68421.68 0.58217 0.00045869 -0.027029 -2.1296E-05 0.55514 0.0004374 787.904919154274 792.908805401682 87.207 1.0017 87.207 86.697 87.699 0 297 82 6 0 0 0 6.6215E-05 2 53574 98.105 98.105 1 0.63916 0.73923 0 68550000 41634000 26916000 26574 1665 10026 10303 41606;41607 41606 NLSSNEAISLEEIR 14 0 1 Unmodified _NLSSNEAISLEEIR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.9095 2 787.904659 1573.79476 68152.55 0.45899 0.00036164 -0.188 -0.00014812 0.27099 0.00021352 787.904685602775 792.908883602818 101.34 0.78018 101.34 101.01 101.79 0 311 52 8 0 0 0 8.3222E-05 2 57368 88.021 88.021 1 0.32389 0.27434 0 31642000 24764000 6877800 26575 1665 10026 10303 41608;41609 41609 NLSSNEAISLEEIR 14 0 1 Unmodified _NLSSNEAISLEEIR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.9099 2 787.904659 1573.79476 68599.97 0.56015 0.00044135 -0.063572 -5.0089E-05 0.49658 0.00039126 787.904756588758 792.909027712441 101.29 0.87653 101.29 100.77 101.65 0 278 56 8 0 0 0 0.0013211 1 56403 54.524 48.553 1 0.32935 0.2873 0 26426000 20029000 6397200 26576 1665 10026 10303 41610 41610 NLSYQVHR 8 0 1 Unmodified _NLSYQVHR_ 0 0 0 Q7KZJ3;A0A024R4Z0;Q96FS1;Q68DU0;C9JZR2;O60716;A0A024R4Y7 Q7KZJ3 Q7KZJ3 CTNND1;DKFZp781O2021 Catenin delta-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.7675 2 508.76724 1015.51993 NaN NaN NaN 0.76228 0.00038782 NaN NaN NaN NaN 24.002 0.19253 24.002 23.868 24.061 0 0 0 0 0.035129 1 9826 56.122 29.52 1 NaN NaN 0 9621800 9621800 0 26577 165 10027 10304 41611 41611 NLTALGLNLVASGGTAK 17 1 0 Unmodified _NLTALGLNLVASGGTAK_ 0 0 0 V9HWH7;B2R7P8;P31939;F8WEF0 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.9662 2 800.456862 1598.89917 NaN NaN NaN 0.57392 0.00045939 NaN NaN NaN NaN 111.14 0.5598 111.14 110.93 111.49 0 0 0 0 5.0296E-20 1 69891 130.47 112.2 1 NaN NaN 0 7526100 0 7526100 26578 852 10028 10305 41612 41612 NLTALGLNLVASGGTAK 17 1 0 Unmodified _NLTALGLNLVASGGTAK_ 0 0 0 V9HWH7;B2R7P8;P31939;F8WEF0 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.9675 2 800.456862 1598.89917 71913.56 0.92205 0.00073806 0.49378 0.00039525 1.4158 0.0011333 800.456755733409 804.464094273468 110.46 0.50645 110.46 110.3 110.8 7.6294E-06 95 37 5 0 0 0 5.7526E-25 1 71070 138.21 138.21 1 5.1432 5.1567 0 13828000 2258200 11570000 26579 852 10028 10305 41613 41613 NLTEDNSQNQDLIAK 15 1 0 Unmodified _NLTEDNSQNQDLIAK_ 0 0 0 Q9UBB4;Q9NTC6;B1AHE3 Q9UBB4 Q9UBB4 ATXN10;DKFZp434I1726 Ataxin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.9227 2 851.915755 1701.81696 67273.45 0.92289 0.00078623 -0.11237 -9.5731E-05 0.81052 0.0006905 851.915712216813 856.424335044814 49.337 0.38202 49.337 49.131 49.513 0 88 25 5 0 0 0 2.4296E-06 1 27080 117.23 111.51 1 1.7117 1.8058 0 16353000 5600900 10752000 26580 2095 10029 10306 41614 41614 NLTEDNSQNQDLIAK 15 1 0 Unmodified _NLTEDNSQNQDLIAK_ 0 0 0 Q9UBB4;Q9NTC6;B1AHE3 Q9UBB4 Q9UBB4 ATXN10;DKFZp434I1726 Ataxin-10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.924 2 851.915755 1701.81696 NaN NaN NaN -0.19512 -0.00016622 NaN NaN NaN NaN 48.063 0.69896 48.063 47.806 48.505 0 0 0 0 6.0476E-05 1 26714 80.69 62.826 1 NaN NaN 0 4478100 0 4478100 26581 2095 10029 10306 41615 41615 NLTVELEQK 9 1 0 Unmodified _NLTVELEQK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.3026 2 537.295496 1072.57644 NaN NaN NaN -0.75204 -0.00040407 NaN NaN NaN NaN 55.45 0.39068 55.45 55.333 55.724 3.8147E-06 0 0 0 0.0051009 1 31872 75.043 38.487 1 NaN NaN 0 6874700 0 6874700 26582 1581 10030 10307 41616 41616 NLTVILSDASAPGEGEHK 18 1 0 Unmodified _NLTVILSDASAPGEGEHK_ 0 0 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 923.4763 2 919.468155 1836.92176 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.463 1 78.463 77.963 78.963 0 0 0 0 1.4895E-09 1 46459 96.059 66.718 1 26583 903 10031 10308 41617 41617 NLTVILSDASAPGEGEHK 18 1 0 Unmodified _NLTVILSDASAPGEGEHK_ 0 0 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 923.9766 2 919.468155 1836.92176 68719.51 0.44403 0.00040827 -0.70744 -0.00065047 -0.26342 -0.0002422 919.968751499702 923.975786280148 89.888 0.44955 89.888 89.668 90.117 0 99 29 5 0 0 0 0.00080004 2 49743 40.676 31.388 1 1.6925 1.4034 0 2294200 942640 1351600 26584 903 10031 10308 41618;41619 41619 NLTVLDAIYEVSR 13 0 1 Unmodified _NLTVLDAIYEVSR_ 0 0 0 V9HWD1;B3KNK0;Q4W5G0 V9HWD1 V9HWD1 HEL106;TIGD2 Tigger transposable element-derived protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.9059 2 746.903931 1491.79331 NaN NaN NaN 0.31732 0.00023701 NaN NaN NaN NaN 122.46 0.17598 122.46 122.42 122.6 0 0 0 0 0.003824 1 81308 63.727 39.384 1 NaN NaN 0 2408600 2408600 0 26585 914 10032 10309 41620 41620 NLTVLDAIYEVSR 13 0 1 Unmodified _NLTVLDAIYEVSR_ 0 0 0 V9HWD1;B3KNK0;Q4W5G0 V9HWD1 V9HWD1 HEL106;TIGD2 Tigger transposable element-derived protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 747.3878 2 746.903931 1491.79331 71840.47 0.65745 0.00049106 -0.18612 -0.00013901 0.47134 0.00035205 746.903953274336 751.907165701498 134.53 0.19067 134.53 134.47 134.66 0 15 5 5 0 0 0 0.012576 1 81299 39.266 39.266 1 1.6309 1.3812 0 4678900 1456900 3222000 26586 914 10032 10309 41621 41621 NLTWTLSNLCR 11 0 1 Unmodified _NLTWTLSNLCR_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.3514 2 689.350811 1376.68707 72046.9 0.9711 0.00066943 0.21393 0.00014747 1.185 0.0008169 689.351041007899 694.355347190575 102.05 0.76854 102.05 101.46 102.23 0 179 60 5 0 0 0 0.00038966 2 62650 82.287 0 1 1.0501 1.0864 0 13831000 6192300 7638300 26587 769 10033 10310 41622;41623 41622 NLTWTLSNLCR 11 0 1 Unmodified _NLTWTLSNLCR_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3501 2 689.350811 1376.68707 NaN NaN NaN -0.34246 -0.00023607 NaN NaN NaN NaN 101.2 0.7308 101.2 100.78 101.51 0 0 0 0 0.017926 1 63546 53.751 0 1 NaN NaN 0 10786000 10786000 0 26588 769 10033 10310 41624 41624 NLTWTLSNLCR 11 0 1 Unmodified _NLTWTLSNLCR_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.3557 2 689.350811 1376.68707 72679.41 0.63919 0.00044063 -0.041015 -2.8274E-05 0.59818 0.00041235 689.350897664891 694.355317947205 114.04 0.58783 114.04 113.79 114.38 0 100 24 8 0 0 0 0.022466 1 65714 42.743 0 1 0.63518 0.52971 0 6660800 4023100 2637600 26589 769 10033 10310 41625 41625 NLTYSAPLYVDITK 14 1 0 Unmodified _NLTYSAPLYVDITK_ 0 0 0 C9J2Y9;B4DHJ3;P30876;B4DR40;C9J4M6;B4DH29 C9J2Y9 C9J2Y9 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.4304 2 799.427239 1596.83992 72287.07 0.92005 0.00073551 0.8711 0.00069638 1.7912 0.0014319 799.428219880395 803.936076404555 106.98 0.47401 106.98 106.78 107.25 0 107 35 5 0 0 0 0.00024168 3 66538 63.408 63.408 1 1.2916 1.2939 0 7635100 3538200 4096900 26590 975 10034 10311 41626;41627;41628 41626 NLTYSAPLYVDITK 14 1 0 Unmodified _NLTYSAPLYVDITK_ 0 0 0 C9J2Y9;B4DHJ3;P30876;B4DR40;C9J4M6;B4DH29 C9J2Y9 C9J2Y9 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.4346 2 799.427239 1596.83992 NaN NaN NaN 0.75201 0.00060118 NaN NaN NaN NaN 106.39 0.46875 106.39 106.21 106.68 0 0 0 0 0.0024866 1 67721 65.5 47.189 1 NaN NaN 0 6398400 0 6398400 26591 975 10034 10311 41629 41629 NLTYSAPLYVDITK 14 1 0 Unmodified _NLTYSAPLYVDITK_ 0 0 0 C9J2Y9;B4DHJ3;P30876;B4DR40;C9J4M6;B4DH29 C9J2Y9 C9J2Y9 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.428 2 799.427239 1596.83992 73084.75 0.59275 0.00047386 0.77749 0.00062154 1.3702 0.0010954 799.427563082498 803.435189869545 118.14 0.37686 118.14 117.93 118.31 0 52 16 5 0 0 0 0.026683 1 68864 32.062 32.062 1 1.1526 0.96206 0 1536800 880010 656800 26592 975 10034 10311 41630 41630 NLVDNITGQR 10 0 1 Unmodified _NLVDNITGQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.3016 2 565.301644 1128.58874 81444.62 0.6088 0.00034415 -0.13387 -7.5678E-05 0.47492 0.00026848 565.301668219288 570.305535318592 61.014 0.90259 61.014 60.699 61.602 0 251 67 6 0 0 0 0.0032667 1 34752 65.305 65.305 1 1.6481 1.8316 0 73399000 24564000 48835000 26593 1754 10035 10312 41631 41631 NLVDNITGQR 10 0 1 Unmodified _NLVDNITGQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.3017 2 565.301644 1128.58874 80556.18 0.65314 0.00036922 -0.48795 -0.00027584 0.16519 9.3381E-05 565.301953526917 570.304894930792 59.834 0.63781 59.834 59.639 60.277 0 246 47 7 0 0 0 0.00019943 1 34778 94.087 94.087 1 1.5257 1.7395 0 98762000 39471000 59291000 26594 1754 10035 10312 41632 41632 NLVDNVAK 8 1 0 Unmodified _NLVDNVAK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.7456 2 436.745442 871.476331 91875.28 0.066127 2.8881E-05 0.36243 0.00015829 0.42856 0.00018717 436.745558481187 440.752550845428 36.507 1.1459 36.507 36.024 37.17 3.8147E-06 378 106 6 0 0 0 0.0084146 2 18645 78.728 52.505 1 1.0952 1.2371 0 107140000 53393000 53742000 26595 1183 10036 10313 41633;41634 41634 NLVDNVAK 8 1 0 Unmodified _NLVDNVAK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.7537 2 436.745442 871.476331 91445.13 0.78423 0.00034251 0.18173 7.9372E-05 0.96597 0.00042188 436.745447771242 440.752458784573 35.659 1.1006 35.659 35.232 36.333 0 367 95 6 0 0 0 0.0095922 2 18117 74.184 43.999 1 1.089 1.2249 0 120020000 57087000 62938000 26596 1183 10036 10313 41635;41636 41636 NLVDPFVEVSFAGK 14 1 0 Unmodified _NLVDPFVEVSFAGK_ 0 0 0 Q9NZM1;O75923 Q9NZM1 Q9NZM1 MYOF;DYSF Myoferlin;Dysferlin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.4064 2 761.401024 1520.78749 NaN NaN NaN -1.5065 -0.001147 NaN NaN NaN NaN 119.19 0.27342 119.19 119.05 119.32 7.6294E-06 0 0 0 0.041734 1 76677 39.917 13.403 1 NaN NaN 0 2535000 0 2535000 26597 2088 10037 10314 41637 41637 NLVELSFLPGDTGKPDVLSASLEGQLTK 28 2 0 Unmodified _NLVELSFLPGDTGKPDVLSASLEGQLTK_ 0 0 1 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 982.5347 3 976.856999 2927.54917 62504.21 0.57645 0.00056311 -0.14185 -0.00013856 0.4346 0.00042454 977.524974117726 982.534191361717 126.23 0.78261 126.23 125.83 126.62 -7.6294E-06 443 60 11 0 0 0 1.9562E-11 2 81933 61.37 61.37 1 1.053 1.2433 0 37382000 16885000 20497000 26598 1741 10038 10315 41638;41639 41638 NLVELSFLPGDTGKPDVLSASLEGQLTK 28 2 0 Unmodified _NLVELSFLPGDTGKPDVLSASLEGQLTK_ 0 0 1 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.1913 3 976.856999 2927.54917 61998.03 0.53599 0.00052359 0.0011925 1.1649E-06 0.53719 0.00052475 977.191197628436 982.534073285596 125.71 0.79974 125.71 125.38 126.18 0 166 51 7 0 0 0 0.00077904 1 83786 27.143 24.767 1 1.1365 1.3167 0 58612000 28675000 29937000 26599 1741 10038 10315 41640 41640 NLVELSFLPGDTGKPDVLSASLEGQLTK 28 2 0 Unmodified _NLVELSFLPGDTGKPDVLSASLEGQLTK_ 0 0 1 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 982.8676 3 976.856999 2927.54917 61759.96 0.22356 0.00021839 -0.020374 -1.9902E-05 0.20319 0.00019849 977.190979794385 982.534260679052 134.46 0.19113 134.46 134.34 134.53 0 42 6 10 0 0 0 2.2326E-27 2 81226 100.06 100.06 1 1.3358 1.1433 0 98088000 39615000 58473000 26600 1741 10038 10315 41641;41642 41642 NLVPGESVYGEK 12 1 0 Unmodified _NLVPGESVYGEK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.3303 2 646.330067 1290.64558 75374.83 1.0953 0.00070792 -0.13831 -8.9396E-05 0.95698 0.00061853 646.32991683974 650.336822228546 59.412 0.36932 59.412 59.218 59.587 0 151 28 8 0 0 0 4.62E-05 2 33798 98.943 38.353 1 0.83361 0.95967 0 209190000 105650000 103530000 26601 1506 10039 10316 41643;41644 41644 NLVPGESVYGEK 12 1 0 Unmodified _NLVPGESVYGEK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.3301 2 646.330067 1290.64558 75407.79 0.75495 0.00048795 -0.35249 -0.00022783 0.40246 0.00026012 646.329833428281 650.336921312978 59.959 1.4117 59.959 59.476 60.888 0 644 119 9 0 0 0 0.00019323 2 34294 77.379 26.772 1 0.74512 0.87185 0 286130000 158420000 127710000 26602 1506 10039 10316 41645;41646 41646 NLVPGESVYGEK 12 1 0 Unmodified _NLVPGESVYGEK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.3301 2 646.330067 1290.64558 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.326 1 61.326 60.826 61.826 0 0 0 0 0.020593 1 35081 51.092 12.07 1 26603 1506 10039 10316 41647 41647 NLVPGESVYGEK 12 1 0 Unmodified _NLVPGESVYGEK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3304 2 646.330067 1290.64558 75889.96 0.88861 0.00057433 0.29215 0.00018883 1.1808 0.00076316 646.330193720822 650.337050945876 58.266 0.22214 58.266 58.129 58.351 -3.8147E-06 78 14 6 0 0 0 0.00018714 2 33808 84.17 35.376 1 0.79994 0.91761 0 167520000 83193000 84331000 26604 1506 10039 10316 41648;41649 41648 NLVPGESVYGEK 12 1 0 Unmodified _NLVPGESVYGEK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3301 2 646.330067 1290.64558 75428.97 1.0008 0.00064687 -0.43417 -0.00028061 0.56667 0.00036625 646.32979609521 650.33687725961 58.843 2.0256 58.843 58.329 60.355 0 833 171 8 0 0 0 0.00034029 3 34314 72.434 30.13 1 0.74742 0.86508 0 206220000 110470000 95746000 26605 1506 10039 10316 41650;41651;41652 41650 NLVPGESVYGEK 12 1 0 Unmodified _NLVPGESVYGEK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.3378 2 646.330067 1290.64558 75542.89 0.47766 0.00030873 0.1148 7.4199E-05 0.59246 0.00038293 646.330188218164 650.33721166028 69.314 2.7765 69.314 68.937 71.714 0 941 203 10 0 0 0 0.00088952 5 36653 64.297 26.822 1 0.94654 0.81818 0 110900000 53582000 57318000 26606 1506 10039 10316 41653;41654;41655;41656;41657 41655 NLVPGESVYGEK 12 1 0 Unmodified _NLVPGESVYGEK_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.3372 2 646.330067 1290.64558 75402.95 0.46794 0.00030245 0.093742 6.0588E-05 0.56169 0.00036303 646.330123588393 650.337209106002 69.906 2.5075 69.906 69.506 72.013 0 970 189 9 0 0 0 0.0017293 5 35756 60.398 22.105 1 0.96866 0.82408 0 80872000 40584000 40288000 26607 1506 10039 10316 41658;41659;41660;41661;41662 41658 NLVPLLLAPENLVEK 15 1 0 Unmodified _NLVPLLLAPENLVEK_ 0 0 0 C9JQQ5;B7Z8V5;B7Z2H0;B5MCN0;Q8NHH9 C9JQQ5 C9JQQ5 ATL2 Atlastin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.5046 2 831.495455 1660.97636 NaN NaN NaN 0.34173 0.00028415 NaN NaN NaN NaN 129.68 0.48776 129.68 129.54 130.03 0 0 0 0 0.0043571 1 84454 57.836 43.146 1 NaN NaN 0 4116000 0 4116000 26608 1080 10040 10317 41663 41663 NLVPLLLAPENLVEK 15 1 0 Unmodified _NLVPLLLAPENLVEK_ 0 0 0 C9JQQ5;B7Z8V5;B7Z2H0;B5MCN0;Q8NHH9 C9JQQ5 C9JQQ5 ATL2 Atlastin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.4957 2 831.495455 1660.97636 63500.04 0.87707 0.00072928 0.45949 0.00038206 1.3366 0.0011113 831.495153322318 835.503880018136 129.22 0.40302 129.22 129.08 129.48 0 68 22 6 0 0 0 0.00022163 2 86298 73.848 73.848 1 2.6147 2.6673 0 9268600 2151000 7117600 26609 1080 10040 10317 41664;41665 41665 NLVQCGDFPHLLVYGPSGAGK 21 1 0 Unmodified _NLVQCGDFPHLLVYGPSGAGK_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.7141 3 743.708884 2228.10482 72166.39 0.7958 0.00059184 -0.76266 -0.00056719 0.033138 2.4645E-05 744.042486544839 746.37981864043 106.65 0.45972 106.65 106.43 106.89 0 144 34 8 0 0 0 1.3138E-07 2 66230 59.512 56.175 1 0.8817 0.91885 0 12297000 7642100 4655300 26610 391 10041 10318 41666;41667 41667 NLVQCGDFPHLLVYGPSGAGK 21 1 0 Unmodified _NLVQCGDFPHLLVYGPSGAGK_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.3815 3 743.708884 2228.10482 71557.03 0.83808 0.00062329 -0.12067 -8.9741E-05 0.71742 0.00053355 744.043189221252 746.714737278615 105.85 0.51443 105.85 105.6 106.12 0 124 39 5 0 0 0 0.013346 1 67196 30.21 30.21 1 0.89057 0.89343 0 15879000 7738400 8140400 26611 391 10041 10318 41668 41668 NLVQCGDFPHLLVYGPSGAGK 21 1 0 Unmodified _NLVQCGDFPHLLVYGPSGAGK_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.0443 3 743.708884 2228.10482 70774.77 0.68827 0.00051188 0.057848 4.3022E-05 0.74612 0.0005549 743.708989074782 746.380284174248 117.27 0.35925 117.27 117.13 117.49 7.6294E-06 96 16 8 0 0 0 2.2702E-08 2 69066 70.453 70.453 1 0.72534 0.57538 0 4520100 2741600 1778500 26612 391 10041 10318 41669;41670 41670 NLVQCGDFPHLLVYGPSGAGK 21 1 0 Unmodified _NLVQCGDFPHLLVYGPSGAGK_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.0447 3 743.708884 2228.10482 70327.71 0.68796 0.00051164 0.54339 0.00040412 1.2313 0.00091577 743.709293717952 746.714890877865 117.07 0.51789 117.07 116.86 117.37 0 100 23 9 0 0 0 2.9459E-07 2 67959 54.271 54.271 1 0.82804 0.67847 0 5384400 2541300 2843100 26613 391 10041 10318 41671;41672 41672 NLVTGIQLNPNNHLQLYSCSLDGTIK 26 1 0 Unmodified _NLVTGIQLNPNNHLQLYSCSLDGTIK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 971.8394 3 971.502673 2911.48619 63822.01 0.42765 0.00041547 -0.2273 -0.00022083 0.20035 0.00019464 972.171238341491 974.50696560468 111.46 0.31459 111.46 111.28 111.59 7.6294E-06 90 19 7 0 0 0 9.102E-10 1 71940 54.658 54.658 1 0.76 0.79766 0 19575000 12493000 7082600 26614 716 10042 10319 41673 41673 NLVTGIQLNPNNHLQLYSCSLDGTIK 26 1 0 Unmodified _NLVTGIQLNPNNHLQLYSCSLDGTIK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 971.838 3 971.502673 2911.48619 61343.8 0.25943 0.00025204 0.3934 0.00038219 0.65283 0.00063422 971.837454785558 974.508425561872 123 0.39893 123 122.81 123.21 0 150 19 12 0 0 0 1.1917E-09 3 73455 52.329 52.329 1 1.2374 0.95933 0 13737000 6687500 7049400 26615 716 10042 10319 41674;41675;41676 41676 NLVTGIQLNPNNHLQLYSCSLDGTIK 26 1 0 Unmodified _NLVTGIQLNPNNHLQLYSCSLDGTIK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 972.1717 3 971.502673 2911.48619 60911.47 0.38758 0.00037653 0.32849 0.00031913 0.71606 0.00069566 972.171785091532 974.508686751815 122.92 0.34483 122.92 122.7 123.05 -7.6294E-06 161 17 12 0 0 0 1.8413E-06 2 72434 43.895 43.895 1 1.0194 0.81774 0 18737000 10763000 7974200 26616 716 10042 10319 41677;41678 41678 NLWIFVSK 8 1 0 Unmodified _NLWIFVSK_ 0 0 0 O14646;B3KT33;A0A024RC75;O14647 O14646;A0A024RC75 O14646 CHD1;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.7898 2 503.789653 1005.56475 88535.64 0.53052 0.00026727 -0.04729 -2.3824E-05 0.48323 0.00024344 503.789560326345 507.796612071006 109.04 0.45522 109.04 108.77 109.23 0 67 34 4 0 0 0 0.015121 1 69849 61.962 61.962 1 0.69515 0.71451 0 4920900 3069800 1851100 26617 1366;354 10043 10320 41679 41679 NLYAANGIGAVLAHK 15 1 0 Unmodified _NLYAANGIGAVLAHK_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.6227 3 504.615814 1510.82561 NaN NaN NaN 0.36774 0.00018557 NaN NaN NaN NaN 82.623 0.56748 82.623 82.355 82.922 0 0 0 0 0.0035691 1 50610 49.436 41.525 1 NaN NaN 0 5695400 0 5695400 26618 765 10044 10321 41680 41680 NLYDFEVEYLCDYK 14 1 0 Unmodified _NLYDFEVEYLCDYK_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 939.9203 2 935.913835 1869.81312 65683.85 0.7744 0.00072477 0.02053 1.9215E-05 0.79493 0.00074399 935.913045470384 939.921059104951 118.04 0.9623 118.04 117.63 118.59 7.6294E-06 123 58 6 0 0 0 8.7491E-05 1 75712 87.363 87.363 1 0.64576 0.65587 0 6231600 3795600 2436100 26619 1385 10045 10322 41681 41681 NLYIISVK 8 1 0 Unmodified _NLYIISVK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7;A4D142 Q9BTQ7 Q9BTQ7 RPL23;LOC222901 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.2961 2 475.289485 948.564418 85647.01 0.44517 0.00021159 0.13451 6.3932E-05 0.57968 0.00027552 475.289732078555 479.296455466784 85.461 1.0006 85.461 85.197 86.198 0 544 83 10 0 0 0 0.009998 3 51295 73.248 47.139 1 0.74673 0.90291 0 1719900000 921670000 798240000 26620 84 10046 10323 41682;41683;41684 41683 NLYIISVK 8 1 0 Unmodified _NLYIISVK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7;A4D142 Q9BTQ7 Q9BTQ7 RPL23;LOC222901 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 949.5715 1 949.571694 948.564418 62064.81 0.85755 0.00081431 0.42194 0.00040066 1.2795 0.001215 949.571955190227 957.586014746603 85.465 1.1322 85.465 85.248 86.38 7.6294E-06 379 94 8 0 0 0 0.020893 2 51953 73.248 46.646 1 0.8626 1.0087 0 282610000 150220000 132390000 26621 84 10046 10323 41685;41686 41686 NLYIISVK 8 1 0 Unmodified _NLYIISVK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7;A4D142 Q9BTQ7 Q9BTQ7 RPL23;LOC222901 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.2896 2 475.289485 948.564418 87735.7 0.10668 5.0705E-05 -0.028188 -1.3397E-05 0.078494 3.7307E-05 475.28959017631 479.296389861347 84.406 1.8953 84.406 84.038 85.934 0 719 152 10 0 0 0 0.0073768 3 51739 83.206 54.057 1 0.76352 0.90146 0 1047800000 588350000 459400000 26622 84 10046 10323 41687;41688;41689 41688 NLYIISVK 8 1 0 Unmodified _NLYIISVK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7;A4D142 Q9BTQ7 Q9BTQ7 RPL23;LOC222901 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.2895 2 475.289485 948.564418 86628.53 0.26281 0.00012491 -0.23653 -0.00011242 0.026286 1.2494E-05 475.289536970094 479.296345575226 97.771 2.4863 97.771 97.226 99.712 0 756 150 10 0 0 0 0.017453 3 54978 60.436 39.916 1 1.8358 1.6032 0 172920000 59640000 113280000 26623 84 10046 10323 41690;41691;41692 41691 NLYIISVK 8 1 0 Unmodified _NLYIISVK_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;C9JD32;B9ZVP7;A4D142 Q9BTQ7 Q9BTQ7 RPL23;LOC222901 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.2895 2 475.289485 948.564418 86407.05 0.25817 0.00012271 -0.16896 -8.0305E-05 0.089211 4.2401E-05 475.289553202169 479.29636844018 97.591 2.2515 97.591 97.21 99.462 0 659 133 10 0 0 0 0.014638 3 53997 62.546 37.652 1 1.6832 1.4466 0 154700000 56350000 98345000 26624 84 10046 10323 41693;41694;41695 41694 NMDAIIVDSEK 11 1 0 Oxidation (M) _NM(ox)DAIIVDSEK_ NM(1)DAIIVDSEK NM(59.54)DAIIVDSEK 0 1 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.8025 2 625.800285 1249.58602 NaN NaN NaN 1.859 0.0011634 NaN NaN NaN NaN 44.494 0.61517 44.494 44.238 44.853 0 0 0 0 0.0030122 1 24199 59.542 47.694 1 NaN NaN 0 9814500 9814500 0 26625 1739 10047 10324 41696 41696 1573 NMDPLNDNIATLLHQSSDK 19 1 0 Oxidation (M) _NM(ox)DPLNDNIATLLHQSSDK_ NM(1)DPLNDNIATLLHQSSDK NM(74.78)DPLNDNIATLLHQSSDK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.6819 3 714.675909 2141.0059 71176.5 0.98766 0.00070585 -0.059489 -4.2516E-05 0.92817 0.00066334 715.010145030414 717.347318822655 98.722 1.0478 98.722 98.241 99.289 0 569 85 9 0 0 0 2.266E-06 2 60274 74.776 72.557 1 2.0133 2.2766 0 103900000 33393000 70505000 26626 81 10048 10325 41697;41698 41697 68 NMDPLNDNIATLLHQSSDK 19 1 0 Oxidation (M) _NM(ox)DPLNDNIATLLHQSSDK_ NM(1)DPLNDNIATLLHQSSDK NM(110.41)DPLNDNIATLLHQSSDK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.0113 3 714.675909 2141.0059 71472.81 0.69848 0.00049918 0.044141 3.1546E-05 0.74262 0.00053073 714.675931891181 717.681647216843 98.015 1.062 98.015 97.363 98.425 0 602 89 12 0 0 0 3.9896E-13 3 61234 110.41 110.41 1 2.0376 2.3278 0 156730000 49622000 107110000 26627 81 10048 10325 41699;41700;41701 41700 68 NMDPLNDNIATLLHQSSDK 19 1 0 Oxidation (M) _NM(ox)DPLNDNIATLLHQSSDK_ NM(1)DPLNDNIATLLHQSSDK NM(85.86)DPLNDNIATLLHQSSDK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.6821 3 714.675909 2141.0059 71513.31 0.94471 0.00067516 -0.13928 -9.9539E-05 0.80543 0.00057562 715.010097090489 717.6815620994 111.46 0.60093 111.46 111.1 111.7 0 204 27 11 0 0 0 2.9604E-07 2 64542 85.855 85.855 1 2.0925 1.6948 0 24111000 7930200 16180000 26628 81 10048 10325 41702;41703 41702 68 NMDPLNDNIATLLHQSSDK 19 1 0 Oxidation (M) _NM(ox)DPLNDNIATLLHQSSDK_ NM(1)DPLNDNIATLLHQSSDK NM(55.45)DPLNDNIATLLHQSSDK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.6824 3 714.675909 2141.0059 70662.48 0.70318 0.00050255 -0.049055 -3.5059E-05 0.65413 0.00046749 715.01011394877 717.34731041806 111.26 0.78857 111.26 110.88 111.67 -7.6294E-06 184 34 10 0 0 0 7.9627E-06 1 63471 55.453 55.453 1 2.1098 1.7287 0 27116000 7532100 19584000 26629 81 10048 10325 41704 41704 68 NMDPLNDNIATLLHQSSDK 19 1 0 Unmodified _NMDPLNDNIATLLHQSSDK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.0158 3 709.34427 2125.01098 NaN NaN NaN -0.061301 -4.3483E-05 NaN NaN NaN NaN 118.44 0.42947 118.44 118.24 118.67 0 0 0 0 0.0020365 1 70041 41.521 31.941 1 NaN NaN 0 4747600 0 4747600 26630 81 10048 10326 41705 41705 NMDPLNDNIATLLHQSSDK 19 1 0 Unmodified _NMDPLNDNIATLLHQSSDK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.6793 3 709.34427 2125.01098 70924.43 0.66256 0.00046998 0.29524 0.00020942 0.95779 0.00067941 709.679336199625 712.0156940774 118.22 0.61048 118.22 118.02 118.63 0 116 28 7 0 0 0 0.010081 2 68927 22.585 22.585 1 1.8285 1.5056 0 10502000 3151500 7350200 26631 81 10048 10326 41706;41707 41707 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 1 Oxidation (M) _NM(ox)GGPYGGGNYGPGGSGGSGGYGGR_ NM(1)GGPYGGGNYGPGGSGGSGGYGGR NM(96.21)GGPYGGGNYGPGGSGGSGGYGGR 0 1 0 P22626;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1103.9541 2 1103.45377 2204.89299 58149.29 0.25179 0.00027784 -0.060893 -6.7192E-05 0.1909 0.00021065 1103.45376055056 1108.45818626707 38.509 0.71174 38.509 38.27 38.981 0 375 58 9 0 0 0 1.7411E-16 3 19738 96.208 96.208 1 2.7447 3.0359 0 59454000 17098000 42356000 26632 1508 10049 10327 41708;41709;41710 41709 1278 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 1 Oxidation (M) _NM(ox)GGPYGGGNYGPGGSGGSGGYGGR_ NM(1)GGPYGGGNYGPGGSGGSGGYGGR NM(82.59)GGPYGGGNYGPGGSGGSGGYGGR 0 1 0 P22626;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1108.9608 2 1103.45377 2204.89299 58109.95 -0.16033 -0.00017692 0.2869 0.00031658 0.12656 0.00013966 1103.45427192688 1108.45852151063 37.669 0.69354 37.669 37.426 38.12 0 331 53 9 0 0 0 2.0079E-13 2 19476 82.59 82.59 1 3.038 3.4702 0 90787000 21142000 69645000 26633 1508 10049 10327 41711;41712 41711 1278 NMLQFNLQILPK 12 1 0 Oxidation (M) _NM(ox)LQFNLQILPK_ NM(1)LQFNLQILPK NM(66.62)LQFNLQILPK 0 1 0 O15371;B4E1K8;B0QYA5;B0QYA6 O15371 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.4166 2 737.907962 1473.80137 73605.38 1.0826 0.00079886 -0.21778 -0.0001607 0.86482 0.00063816 737.907742340812 741.914906106584 115.65 0.44725 115.65 115.44 115.89 0 83 30 5 0 0 0 0.00035495 1 73588 66.621 56.39 1 2.994 3.0423 0 6314600 2040400 4274100 26634 1378 10050 10328 41713 41713 1040 NMLQFNLQILPK 12 1 0 Oxidation (M) _NM(ox)LQFNLQILPK_ NM(1)LQFNLQILPK NM(76.83)LQFNLQILPK 0 1 0 O15371;B4E1K8;B0QYA5;B0QYA6 O15371 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.9156 2 737.907962 1473.80137 73905.3 0.77491 0.00057181 -0.03992 -2.9457E-05 0.73499 0.00054236 738.410087178678 741.915011273546 115.04 0.41279 115.04 114.91 115.32 0 65 27 5 0 0 0 9.2296E-05 1 75005 76.827 63.871 1 2.8636 2.8363 0 5907400 1808200 4099100 26635 1378 10050 10328 41714 41714 1040 NMLTEELYGNTFQLYK 16 1 0 Oxidation (M) _NM(ox)LTEELYGNTFQLYK_ NM(1)LTEELYGNTFQLYK NM(53.03)LTEELYGNTFQLYK 0 1 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 994.4825 2 990.474591 1978.93463 61293.97 0.4943 0.00048959 -0.43208 -0.00042796 0.06222 6.1628E-05 990.474006491921 994.480630402532 111.1 0.33235 111.1 110.99 111.32 0 64 23 5 0 0 0 0.00016816 1 71638 53.034 53.034 1 0.76205 0.77027 0 8669300 4052900 4616400 26636 1761 10051 10329 41715 41715 1629 NMLTEELYGNTFQLYK 16 1 0 Oxidation (M) _NM(ox)LTEELYGNTFQLYK_ NM(1)LTEELYGNTFQLYK NM(46.59)LTEELYGNTFQLYK 0 1 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 990.472 2 990.474591 1978.93463 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.25 1 111.25 110.75 111.75 0 0 0 0 0.0042669 1 71755 46.592 40.747 1 26637 1761 10051 10329 41716 41716 1629 NMQDLVEDFK 10 1 0 Unmodified _NMQDLVEDFK_ 0 0 0 CON__P13647;P13647;F8W0C6 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.7903 2 619.789721 1237.56489 NaN NaN NaN -0.6741 -0.0004178 NaN NaN NaN NaN 42.032 0.51683 42.032 41.774 42.29 0 0 0 0 0.005622 1 22268 68.016 6.3373 1 NaN NaN 0 43751000 43751000 0 + 26638 1162 10052 10330 41717 41717 NMQDLVEDFK 10 1 0 Unmodified _NMQDLVEDFK_ 0 0 0 CON__P13647;P13647;F8W0C6 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 619.7904 2 619.789721 1237.56489 NaN NaN NaN 0.18732 0.0001161 NaN NaN NaN NaN 107.52 0.7267 107.52 107.23 107.96 0 0 0 0 0.013317 1 60802 59.908 4.9259 1 NaN NaN 0 2101700 2101700 0 + 26639 1162 10052 10330 41718 41718 NMQDMVEDYR 10 0 1 2 Oxidation (M) _NM(ox)QDM(ox)VEDYR_ NM(1)QDM(1)VEDYR NM(136.84)QDM(136.84)VEDYR 0 2 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.764 2 666.763377 1331.5122 NaN NaN NaN -0.12539 -8.3604E-05 NaN NaN NaN NaN 24.621 0.5165 24.621 24.314 24.831 -1.9073E-06 0 0 0 2.1716E-16 1 10223 136.84 133.86 1 NaN NaN 0 59244000 59244000 0 + 26640 1308;1309 10053 10331 41719 41719 993;994 NMQDMVEDYR 10 0 1 2 Oxidation (M) _NM(ox)QDM(ox)VEDYR_ NM(1)QDM(1)VEDYR NM(80.23)QDM(80.23)VEDYR 0 2 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.7635 2 666.763377 1331.5122 NaN NaN NaN -0.2362 -0.00015749 NaN NaN NaN NaN 25.342 0.63961 25.342 24.994 25.633 0 0 0 0 0.00047359 1 10897 80.231 76.66 1 NaN NaN 0 46238000 46238000 0 + 26641 1308;1309 10053 10331 41720 41720 993;994 NMQDMVEDYR 10 0 1 2 Oxidation (M) _NM(ox)QDM(ox)VEDYR_ NM(1)QDM(1)VEDYR NM(143.89)QDM(143.89)VEDYR 0 2 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.7635 2 666.763377 1331.5122 NaN NaN NaN -0.18251 -0.00012169 NaN NaN NaN NaN 24.394 0.75137 24.394 23.987 24.738 0 0 0 0 3.1655E-22 1 9989 143.89 139.28 1 NaN NaN 0 65792000 65792000 0 + 26642 1308;1309 10053 10331 41721 41721 993;994 NMQDMVEDYR 10 0 1 2 Oxidation (M) _NM(ox)QDM(ox)VEDYR_ NM(1)QDM(1)VEDYR NM(101.82)QDM(101.82)VEDYR 0 2 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.7635 2 666.763377 1331.5122 NaN NaN NaN -0.34215 -0.00022814 NaN NaN NaN NaN 25.081 0.60011 25.081 24.792 25.393 0 0 0 0 8.108E-06 1 10661 101.82 98.409 1 NaN NaN 0 70668000 70668000 0 + 26643 1308;1309 10053 10331 41722 41722 993;994 NMQDMVEDYR 10 0 1 2 Oxidation (M) _NM(ox)QDM(ox)VEDYR_ NM(1)QDM(1)VEDYR NM(63.82)QDM(63.82)VEDYR 0 2 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.764 2 666.763377 1331.5122 NaN NaN NaN -0.15208 -0.0001014 NaN NaN NaN NaN 27.844 0.59295 27.844 27.476 28.069 1.9073E-06 0 0 0 0.0018049 1 10847 63.816 61.137 1 NaN NaN 0 6990900 6990900 0 + 26644 1308;1309 10053 10331 41723 41723 993;994 NMQDMVEDYR 10 0 1 2 Oxidation (M) _NM(ox)QDM(ox)VEDYR_ NM(1)QDM(1)VEDYR NM(52.49)QDM(52.49)VEDYR 0 2 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.7635 2 666.763377 1331.5122 NaN NaN NaN -0.17603 -0.00011737 NaN NaN NaN NaN 28.602 0.43208 28.602 28.397 28.829 0 0 0 0 0.0053295 1 11424 52.49 49.081 1 NaN NaN 0 6021100 6021100 0 + 26645 1308;1309 10053 10331 41724 41724 993;994 NMQDMVEDYR 10 0 1 2 Oxidation (M) _NM(ox)QDM(ox)VEDYR_ NM(1)QDM(1)VEDYR NM(63.22)QDM(63.22)VEDYR 0 2 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.7634 2 666.763377 1331.5122 NaN NaN NaN -0.14152 -9.4362E-05 NaN NaN NaN NaN 28.07 0.60399 28.07 27.763 28.367 -1.9073E-06 0 0 0 0.0019149 1 10462 63.216 59.808 1 NaN NaN 0 5302700 5302700 0 + 26646 1308;1309 10053 10331 41725 41725 993;994 NMQDMVEDYR 10 0 1 2 Oxidation (M) _NM(ox)QDM(ox)VEDYR_ NM(1)QDM(1)VEDYR NM(46)QDM(46)VEDYR 0 2 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.7631 2 666.763377 1331.5122 NaN NaN NaN 0.033427 2.2288E-05 NaN NaN NaN NaN 28.936 0.41007 28.936 28.76 29.17 1.9073E-06 0 0 0 0.010026 1 11104 46.001 42.593 1 NaN NaN 0 4734300 4734300 0 + 26647 1308;1309 10053 10331 41726 41726 993;994 NMQDMVEDYR 10 0 1 Oxidation (M) _NMQDM(ox)VEDYR_ NMQDM(1)VEDYR NM(-54.62)QDM(54.62)VEDYR 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.7659 2 658.76592 1315.51729 NaN NaN NaN 0.39096 0.00025755 NaN NaN NaN NaN 41.222 0.40639 41.222 40.982 41.388 0 0 0 0 0.0013601 1 21731 72.928 68.629 2 NaN NaN 0 4263100 4263100 0 + 26648 1308;1309 10053 10332 41727 41727 993;994 NMQDMVEDYR 10 0 1 Oxidation (M) _NMQDM(ox)VEDYR_ NMQDM(1)VEDYR NM(-63.25)QDM(63.25)VEDYR 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.7672 2 658.76592 1315.51729 NaN NaN NaN -0.063213 -4.1642E-05 NaN NaN NaN NaN 40.365 0.32876 40.365 40.251 40.58 0 0 0 0 0.00056272 1 21571 83.948 79.257 2 NaN NaN 0 6635400 6635400 0 + 26649 1308;1309 10053 10332 41728 41728 993;994 NMQDMVEDYR 10 0 1 Oxidation (M) _NM(ox)QDMVEDYR_ NM(1)QDMVEDYR NM(37.69)QDM(-37.69)VEDYR 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.7661 2 658.76592 1315.51729 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.398 1 37.398 36.898 37.898 0 0 0 0 0.0028653 1 19412 62.463 50.416 2 + 26650 1308;1309 10053 10332 41729 41729 993;994 NMQDMVEDYR 10 0 1 Oxidation (M) _NMQDM(ox)VEDYR_ NMQDM(1)VEDYR NM(-41.69)QDM(41.69)VEDYR 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.7656 2 658.76592 1315.51729 NaN NaN NaN -0.10505 -6.92E-05 NaN NaN NaN NaN 48.273 0.59954 48.273 47.981 48.581 3.8147E-06 0 0 0 0.0054882 1 23612 55.461 53.653 2 NaN NaN 0 4574000 4574000 0 + 26651 1308;1309 10053 10332 41730 41730 993;994 NMQDMVEDYR 10 0 1 Oxidation (M) _NMQDM(ox)VEDYR_ NMQDM(1)VEDYR NM(-35.29)QDM(35.29)VEDYR 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.7663 2 658.76592 1315.51729 NaN NaN NaN -0.10772 -7.0962E-05 NaN NaN NaN NaN 50.114 0.5829 50.114 49.836 50.419 0 0 0 0 0.012851 1 24594 49.06 48.558 2 NaN NaN 0 6267200 6267200 0 + 26652 1308;1309 10053 10332 41731 41731 993;994 NMQDMVEDYR 10 0 1 Oxidation (M) _NMQDM(ox)VEDYR_ NMQDM(1)VEDYR NM(-73.29)QDM(73.29)VEDYR 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.2677 2 658.76592 1315.51729 NaN NaN NaN -0.18276 -0.0001204 NaN NaN NaN NaN 48.82 0.5698 48.82 48.565 49.135 0 0 0 0 7.3932E-06 1 23178 103.55 99.975 2 NaN NaN 0 4129700 4129700 0 + 26653 1308;1309 10053 10332 41732 41732 993;994 NMQDMVEDYR 10 0 1 Oxidation (M) _NMQDM(ox)VEDYR_ NMQDM(1)VEDYR NM(-45.99)QDM(45.99)VEDYR 0 1 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.7662 2 658.76592 1315.51729 NaN NaN NaN -0.035379 -2.3306E-05 NaN NaN NaN NaN 50.712 0.66283 50.712 50.409 51.072 -3.8147E-06 0 0 0 0.0031498 1 24239 63.216 62.714 2 NaN NaN 0 4676500 4676500 0 + 26654 1308;1309 10053 10332 41733 41733 993;994 NMQDMVEDYR 10 0 1 Unmodified _NMQDMVEDYR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.7686 2 650.768462 1299.52237 NaN NaN NaN -0.58568 -0.00038114 NaN NaN NaN NaN 74.309 0.6041 74.309 74.037 74.641 0 0 0 0 0.020313 1 39339 54.539 36.1 1 NaN NaN 0 3362900 3362900 0 + 26655 1308;1309 10053 10333 41734 41734 NMQEVVEDFK 10 1 0 Oxidation (M) _NM(ox)QEVVEDFK_ NM(1)QEVVEDFK NM(50.04)QEVVEDFK 0 1 0 CON__Q8BGZ7 CON__Q8BGZ7 CON__Q8BGZ7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.7877 2 627.787178 1253.5598 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.872 1 30.872 30.372 31.372 0 0 0 0 0.014342 1 15161 50.04 7.4417 1 + 26656 1180 10054 10334 41735 41735 891 NMQEVVEDFK 10 1 0 Oxidation (M) _NM(ox)QEVVEDFK_ NM(1)QEVVEDFK NM(48.28)QEVVEDFK 0 1 0 CON__Q8BGZ7 CON__Q8BGZ7 CON__Q8BGZ7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.7872 2 627.787178 1253.5598 72666.95 0.37888 0.00023786 -0.7389 -0.00046387 -0.36002 -0.00022601 627.787169306845 631.793561770104 30.285 0.53236 30.285 30.068 30.6 -1.9073E-06 147 44 5 0 0 0 0.007933 1 14816 48.283 8.2815 1 0.7098 0.71423 0 27153000 15920000 11233000 + 26657 1180 10054 10334 41736 41736 891 NMSGSLYEMVSR 12 0 1 2 Oxidation (M) _NM(ox)SGSLYEM(ox)VSR_ NM(1)SGSLYEM(1)VSR NM(83.4)SGSLYEM(83.4)VSR 0 2 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3094 2 703.307952 1404.60135 72310.98 0.68405 0.0004811 -0.41151 -0.00028942 0.27254 0.00019168 703.307875360331 708.312139736797 42.419 1.1573 42.419 42.163 43.321 3.8147E-06 231 90 6 0 0 0 0.00026615 2 22471 83.397 77.615 1 2.0166 2.0499 0 27591000 9774100 17817000 26658 167 10055 10335 41737;41738 41738 137;138 NMSGSLYEMVSR 12 0 1 2 Oxidation (M) _NM(ox)SGSLYEM(ox)VSR_ NM(1)SGSLYEM(1)VSR NM(90.69)SGSLYEM(90.69)VSR 0 2 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3087 2 703.307952 1404.60135 NaN NaN NaN -0.2242 -0.00015768 NaN NaN NaN NaN 43.003 0.57232 43.003 42.76 43.332 3.8147E-06 0 0 0 5.2427E-05 1 23009 90.685 68.599 1 NaN NaN 0 5720300 5720300 0 26659 167 10055 10335 41739 41739 137;138 NMSGSLYEMVSR 12 0 1 2 Oxidation (M) _NM(ox)SGSLYEM(ox)VSR_ NM(1)SGSLYEM(1)VSR NM(127.42)SGSLYEM(127.42)VSR 0 2 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.8101 2 703.307952 1404.60135 72412.9 0.75524 0.00053117 -0.23377 -0.00016441 0.52148 0.00036676 703.307927897467 708.312126695591 42.242 1.2318 42.242 41.521 42.753 -3.8147E-06 399 107 6 0 0 0 1.9013E-12 2 22815 127.42 127.42 1 1.9355 2.1147 0 30240000 11643000 18597000 26660 167 10055 10335 41740;41741 41741 137;138 NMSGSLYEMVSR 12 0 1 2 Oxidation (M) _NM(ox)SGSLYEM(ox)VSR_ NM(1)SGSLYEM(1)VSR NM(46.35)SGSLYEM(46.35)VSR 0 2 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.308 2 703.307952 1404.60135 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.572 1 41.572 41.072 42.072 0 0 0 0 0.023297 1 22348 46.352 36.12 1 26661 167 10055 10335 41742 41742 137;138 NMSVHLSPCFR 11 0 1 Oxidation (M) _NM(ox)SVHLSPCFR_ NM(1)SVHLSPCFR NM(102.52)SVHLSPCFR 0 1 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.3162 2 682.315914 1362.61727 71166.2 0.7256 0.00049509 -0.19804 -0.00013513 0.52756 0.00035996 682.315802107859 687.320146553528 48.573 0.6737 48.573 48.22 48.894 0 248 51 7 0 0 0 1.2667E-05 1 26348 102.52 78.493 1 1.2528 1.3944 0 78688000 35105000 43583000 26662 1641 10056 10336 41743 41743 1420 NMSVHLSPCFR 11 0 1 Oxidation (M) _NM(ox)SVHLSPCFR_ NM(1)SVHLSPCFR NM(40.62)SVHLSPCFR 0 1 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2133 3 455.213035 1362.61727 88555.37 0.37828 0.0001722 -0.55145 -0.00025103 -0.17316 -7.8826E-05 455.212923121541 458.54900084951 48.514 1.1046 48.514 48.128 49.233 -3.8147E-06 532 86 10 0 0 0 0.0067476 1 26407 40.616 25.414 1 1.2269 1.4252 0 178380000 81857000 96519000 26663 1641 10056 10336 41744 41744 1420 NMSVHLSPCFR 11 0 1 Oxidation (M) _NM(ox)SVHLSPCFR_ NM(1)SVHLSPCFR NM(46.59)SVHLSPCFR 0 1 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.5497 3 455.213035 1362.61727 85552.23 0.27505 0.00012521 -0.36103 -0.00016434 -0.08598 -3.9139E-05 455.212985788266 458.549056996645 46.955 0.79767 46.955 46.471 47.269 0 429 68 8 0 0 0 0.00378 2 25861 46.592 31.904 1 1.2349 1.409 0 142380000 67750000 74625000 26664 1641 10056 10336 41745;41746 41746 1420 NMSVHLSPCFR 11 0 1 Oxidation (M) _NM(ox)SVHLSPCFR_ NM(1)SVHLSPCFR NM(69.98)SVHLSPCFR 0 1 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.3196 2 682.315914 1362.61727 70101.72 0.63833 0.00043554 -0.38149 -0.0002603 0.25684 0.00017525 682.315490704539 687.320123833531 46.916 0.65618 46.916 46.561 47.217 0 263 57 6 0 0 0 0.00054008 2 25870 69.979 52.115 1 1.3176 1.5063 0 50506000 20492000 30014000 26665 1641 10056 10336 41747;41748 41748 1420 NMSVHLSPCFR 11 0 1 Oxidation (M) _NM(ox)SVHLSPCFR_ NM(1)SVHLSPCFR NM(47.89)SVHLSPCFR 0 1 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.3151 2 682.315914 1362.61727 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.532 1 55.532 55.032 56.032 3.8147E-06 0 0 0 0.014875 1 27861 47.894 20.59 1 26666 1641 10056 10336 41749 41749 1420 NMSVHLSPCFR 11 0 1 Oxidation (M) _NM(ox)SVHLSPCFR_ NM(1)SVHLSPCFR NM(55.4)SVHLSPCFR 0 1 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.3166 2 682.315914 1362.61727 71492.91 0.54125 0.0003693 -0.92941 -0.00063415 -0.38816 -0.00026485 682.316107357048 687.320489099357 55.843 0.70669 55.843 55.445 56.152 0 218 44 9 0 0 0 0.0028527 1 27397 55.401 34.53 1 0.73655 0.61363 0 6932800 4121500 2811300 26667 1641 10056 10336 41750 41750 1420 NMSVHLSPCFR 11 0 1 Unmodified _NMSVHLSPCFR_ 0 0 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 453.2172 3 449.881397 1346.62236 86965.84 0.10131 4.5578E-05 -0.38465 -0.00017305 -0.28334 -0.00012747 449.881421980887 453.217469421801 76.047 0.75589 76.047 75.766 76.521 7.6294E-06 282 54 9 0 0 0 0.028233 2 40469 22.578 20.015 1 1.1187 0.91608 0 16488000 7875700 8612500 26668 1641 10056 10337 41751;41752 41752 NMSVHLSPCFR 11 0 1 Unmodified _NMSVHLSPCFR_ 0 0 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.3195 2 674.318457 1346.62236 73512.38 0.55145 0.00037185 -0.7724 -0.00052085 -0.22095 -0.00014899 674.318286372173 679.32240248169 76.01 0.61453 76.01 75.693 76.308 0 157 41 7 0 0 0 0.025562 2 40483 41.164 37.401 1 1.0583 0.91053 0 7031000 3216200 3814800 26669 1641 10056 10337 41753;41754 41753 NMSVHLSPCFR 11 0 1 Unmodified _NMSVHLSPCFR_ 0 0 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.3187 2 674.318457 1346.62236 73235.95 0.45124 0.00030428 -0.3531 -0.00023811 0.09813 6.6171E-05 674.318281085433 679.322482080884 76.183 0.52644 76.183 75.903 76.429 0 154 32 6 0 0 0 0.00065503 2 39746 73.499 68.534 1 1.1465 0.95517 0 6940800 3503800 3437000 26670 1641 10056 10337 41755;41756 41756 NMSVHLSPCFR 11 0 1 Unmodified _NMSVHLSPCFR_ 0 0 0 P62280;M0QZC5;M0R1H5 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 453.2174 3 449.881397 1346.62236 85242.46 -0.070334 -3.1642E-05 -0.29857 -0.00013432 -0.3689 -0.00016596 449.881384344194 453.217403314837 76.169 0.94398 76.169 75.804 76.748 7.6294E-06 252 61 8 0 0 0 0.0205 1 39701 31.478 28.985 1 1.131 0.93279 0 14372000 7136200 7235400 26671 1641 10056 10337 41757 41757 NMSVIAHVDHGK 12 1 0 Oxidation (M) _NM(ox)SVIAHVDHGK_ NM(1)SVIAHVDHGK NM(76.16)SVIAHVDHGK 0 1 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 444.5584 3 441.887316 1322.64012 89556.91 -0.38885 -0.00017183 -0.11384 -5.0306E-05 -0.50269 -0.00022213 441.887360366598 444.558713399657 19.211 0.22625 19.211 19.11 19.336 0 32 7 7 0 0 0 4.7435E-05 1 5682 76.165 73.214 1 4.5026 5.0809 0 64180000 12103000 52076000 26672 1478 10057 10338 41758 41758 1230 NMTPSPFLR 9 0 1 Oxidation (M) _NM(ox)TPSPFLR_ NM(1)TPSPFLR NM(58.6)TPSPFLR 0 1 0 P82663;E7EPW2 P82663 P82663 MRPS25 28S ribosomal protein S25, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.8297 2 539.771134 1077.52771 NaN NaN NaN -0.23416 -0.00012639 NaN NaN NaN NaN 56.245 0.45593 56.245 55.947 56.403 3.8147E-06 0 0 0 0.0063431 2 31658 58.596 47.228 1 NaN NaN 0 4733500 0 4733500 26673 1667 10058 10339 41759;41760 41760 1470 NMVHPNVICDGCNGPVVGTR 20 0 1 Oxidation (M) _NM(ox)VHPNVICDGCNGPVVGTR_ NM(1)VHPNVICDGCNGPVVGTR NM(76.3)VHPNVICDGCNGPVVGTR 0 1 0 Q13501;E7EMC7;E9PFW8;E3WH17;Q13502;C9JRJ8;E3W990;B4DE82 Q13501 Q13501 SQSTM1;SQSTM1-ALK Sequestosome-1;Tyrosine-protein kinase receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.3433 3 738.006718 2210.99833 73422.75 0.75919 0.00056028 -0.01882 -1.3889E-05 0.74037 0.0005464 738.340644750406 741.677287904976 54.247 0.49414 54.247 54.01 54.505 -3.8147E-06 86 39 5 0 0 0 3.0854E-07 3 30406 76.301 74.202 1 1.99 2.0287 0 18659000 3429200 15230000 26674 1714 10059 10340 41761;41762;41763 41761 1543 NMVHPNVICDGCNGPVVGTR 20 0 1 Oxidation (M) _NM(ox)VHPNVICDGCNGPVVGTR_ NM(1)VHPNVICDGCNGPVVGTR NM(60.62)VHPNVICDGCNGPVVGTR 0 1 0 Q13501;E7EMC7;E9PFW8;E3WH17;Q13502;C9JRJ8;E3W990;B4DE82 Q13501 Q13501 SQSTM1;SQSTM1-ALK Sequestosome-1;Tyrosine-protein kinase receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.6777 3 738.006718 2210.99833 72942.91 0.49116 0.00036248 -0.22308 -0.00016463 0.26808 0.00019784 738.340947887509 741.677111280965 52.849 0.47352 52.849 52.611 53.084 0 130 38 5 0 0 0 9.3906E-07 1 30156 60.621 58.76 1 2.1595 2.1236 0 13458000 3932400 9525900 26675 1714 10059 10340 41764 41764 1543 NMYPPPSFPTNK 12 1 0 Oxidation (M) _NM(ox)YPPPSFPTNK_ NM(1)YPPPSFPTNK NM(51.09)YPPPSFPTNK 0 1 0 Q7Z3K3;B4DSK8;H0YCT3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.8409 2 704.83192 1407.64929 NaN NaN NaN 1.3135 0.00092583 NaN NaN NaN NaN 54.473 0.20995 54.473 54.36 54.57 0 0 0 0 0.006346 1 31096 51.092 32.78 1 NaN NaN 0 2172000 0 2172000 26676 1874 10060 10341 41765 41765 1725 NNALVPGTIQVNGHGGQPSK 20 1 0 Unmodified _NNALVPGTIQVNGHGGQPSK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3312 3 663.348455 1987.02354 76995.92 0.84612 0.00056127 -0.56807 -0.00037683 0.27805 0.00018444 663.68232307743 666.353347372404 56.041 0.24425 56.041 55.931 56.175 0 53 17 4 0 0 0 0.001402 1 31538 29.444 29.444 1 1.0174 1.0638 0 11941000 6011000 5930000 26677 1942 10061 10342 41766 41766 NNALVPGTIQVNGHGGQPSK 20 1 0 Unmodified _NNALVPGTIQVNGHGGQPSK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3548 3 663.348455 1987.02354 77164.46 0.50486 0.0003349 0.26008 0.00017252 0.76494 0.00050742 663.348933933204 666.353764308771 54.878 0.48138 54.878 54.59 55.071 0 149 41 7 0 0 0 6.1731E-07 2 31416 70.216 70.216 1 0.93926 0.99071 0 19947000 10086000 9861600 26678 1942 10061 10342 41767;41768 41767 NNALVPGTIQVNGHGGQPSK 20 1 0 Unmodified _NNALVPGTIQVNGHGGQPSK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 998.5266 2 994.519044 1987.02354 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.811 1 54.811 54.311 55.311 0 0 0 0 0.0020711 1 31363 53.448 36.422 1 26679 1942 10061 10342 41769 41769 NNALVPGTIQVNGHGGQPSK 20 1 0 Unmodified _NNALVPGTIQVNGHGGQPSK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.3538 3 663.348455 1987.02354 75043.09 0.72853 0.00048327 0.12549 8.3245E-05 0.85403 0.00056652 663.682648816406 666.353935114333 65.419 0.47018 65.419 65.203 65.673 0 167 34 7 0 0 0 2.7935E-05 2 33756 44.468 44.468 1 1.8187 1.4396 0 4992400 2113700 2878700 26680 1942 10061 10342 41770;41771 41770 NNALVPGTIQVNGHGGQPSK 20 1 0 Unmodified _NNALVPGTIQVNGHGGQPSK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.3549 3 663.348455 1987.02354 74553.17 0.42842 0.00028419 0.73792 0.0004895 1.1663 0.00077369 663.68312639676 666.020248332786 65.796 0.46336 65.796 65.587 66.051 0 153 36 6 0 0 0 0.0012863 2 33224 30.21 30.21 1 1.8294 1.4247 0 3585600 1164800 2420800 26681 1942 10061 10342 41772;41773 41772 NNASTDYDLSDK 12 1 0 Unmodified _NNASTDYDLSDK_ 0 0 0 P39023;Q8TBW1;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.7983 2 671.791503 1341.56845 73273.01 0.45399 0.00030499 0.10763 7.2302E-05 0.56162 0.00037729 671.791665742702 675.798517373474 29.856 1.1866 29.856 29.575 30.762 0 559 103 8 0 0 0 4.9568E-23 5 14403 159.83 153.23 1 0.95537 1.1254 0 326040000 169750000 156290000 26682 1554;936 10062 10343 41774;41775;41776;41777;41778 41775 NNASTDYDLSDK 12 1 0 Unmodified _NNASTDYDLSDK_ 0 0 0 P39023;Q8TBW1;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.7991 2 671.791503 1341.56845 73521.82 0.7959 0.00053468 -0.13084 -8.7894E-05 0.66507 0.00044679 671.791537998504 675.798359246731 29.34 1.1732 29.34 29.004 30.177 0 472 89 9 0 0 0 1.5719E-18 3 14060 148.9 143.34 1 0.97655 1.1497 0 444140000 219790000 224340000 26683 1554;936 10062 10343 41779;41780;41781 41779 NNASTDYDLSDK 12 1 0 Unmodified _NNASTDYDLSDK_ 0 0 0 P39023;Q8TBW1;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.7988 2 671.791503 1341.56845 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.37 1 30.37 29.87 30.87 1.9073E-06 0 0 0 0.0068786 1 14870 61.344 49.297 1 26684 1554;936 10062 10343 41782 41782 NNASTDYDLSDK 12 1 0 Unmodified _NNASTDYDLSDK_ 0 0 0 P39023;Q8TBW1;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.7991 2 671.791503 1341.56845 73955.45 0.62134 0.00041741 -0.062332 -4.1874E-05 0.559 0.00037553 671.791633554234 675.798400557678 34.359 1.6883 34.359 33.809 35.498 0 616 124 8 0 0 0 2.3097E-05 3 15043 101.95 96.641 1 1.0788 0.933 0 113230000 53734000 59493000 26685 1554;936 10062 10343 41783;41784;41785 41784 NNASTDYDLSDK 12 1 0 Unmodified _NNASTDYDLSDK_ 0 0 0 P39023;Q8TBW1;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.7991 2 671.791503 1341.56845 74104.31 0.64243 0.00043158 -0.16583 -0.00011141 0.47659 0.00032017 671.791629746463 675.798330303517 34.56 0.96638 34.56 34.194 35.161 0 560 77 11 0 0 0 0.00014324 2 14629 93.258 92.951 1 1.0711 0.91431 0 100500000 47683000 52819000 26686 1554;936 10062 10343 41786;41787 41787 NNAYLAQSPQLYK 13 1 0 Unmodified _NNAYLAQSPQLYK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.397 2 755.388448 1508.76234 70162.87 0.38236 0.00028883 0.47945 0.00036217 0.86181 0.000651 755.38848620891 759.395800941617 68.476 0.57637 68.476 68.248 68.825 0 183 50 5 0 0 0 3.6292E-09 2 39669 121.6 121.6 1 1.1124 1.1322 0 14076000 6694200 7382100 26687 610 10063 10344 41788;41789 41789 NNAYLAQSPQLYK 13 1 0 Unmodified _NNAYLAQSPQLYK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.3966 2 755.388448 1508.76234 NaN NaN NaN 0.19335 0.00014605 NaN NaN NaN NaN 67.356 0.58284 67.356 67.097 67.68 0 0 0 0 6.5742E-06 1 39855 100.88 85.307 1 NaN NaN 0 11182000 0 11182000 26688 610 10063 10344 41790 41790 NNDLCYWVPELVR 13 0 1 Unmodified _NNDLCYWVPELVR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.4131 2 839.406315 1676.79808 70763.08 1.0208 0.0008569 0.63655 0.00053433 1.6574 0.0013912 839.406624363805 844.411304888476 119.29 0.31741 119.29 119.09 119.41 -7.6294E-06 57 20 4 0 0 0 0.0032908 1 76611 50.284 50.284 1 1.5987 1.6595 0 5622900 2832500 2790400 26689 1561 10064 10345 41791 41791 NNDLLFR 7 0 1 Unmodified _NNDLLFR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.2383 2 446.237784 890.461016 NaN NaN NaN 0.093501 4.1724E-05 NaN NaN NaN NaN 62.502 0.86243 62.502 62.071 62.934 0 0 0 0 0.045068 1 36729 60.76 39.213 1 NaN NaN 0 7130200 7130200 0 26690 1088;1189 10065 10346 41792 41792 NNDLQDNYLSEQNK 14 1 0 Unmodified _NNDLQDNYLSEQNK_ 0 0 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.8863 2 847.884455 1693.75436 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.405 1 49.405 48.905 49.905 0 0 0 0 0.00044101 1 27129 83.397 73.964 1 26691 300 10066 10347 41793 41793 NNEDISIIPPLFTVSVDHR 19 0 1 Unmodified _NNEDISIIPPLFTVSVDHR_ 0 0 0 A6NLM8;P51571 A6NLM8 A6NLM8 SSR4 Translocon-associated protein subunit delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.046 3 722.711171 2165.11168 71884.45 0.76191 0.00055064 0.1795 0.00012972 0.9414 0.00068036 723.045553278658 726.047498124819 124.12 0.53146 124.12 123.9 124.43 7.6294E-06 152 36 6 0 0 0 8.3216E-05 1 80557 44.788 44.788 1 0.68491 0.69159 0 9577200 4550500 5026700 26692 688 10067 10348 41794 41794 NNEDISIIPPLFTVSVDHR 19 0 1 Unmodified _NNEDISIIPPLFTVSVDHR_ 0 0 0 A6NLM8;P51571 A6NLM8 A6NLM8 SSR4 Translocon-associated protein subunit delta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.7134 3 722.711171 2165.11168 NaN NaN NaN 0.49712 0.00035927 NaN NaN NaN NaN 123.66 0.49718 123.66 123.38 123.87 -7.6294E-06 0 0 0 0.030518 1 82036 22.313 13.713 1 NaN NaN 0 6715600 6715600 0 26693 688 10067 10348 41795 41795 NNEELVVSASCK 12 1 0 Unmodified _NNEELVVSASCK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3216 2 675.321916 1348.62928 NaN NaN NaN 0.22928 0.00015484 NaN NaN NaN NaN 40.691 0.41475 40.691 40.484 40.899 3.8147E-06 0 0 0 1.1353E-10 1 21810 118.28 104.07 1 NaN NaN 0 5744800 5744800 0 26694 1275 10068 10349 41796 41796 NNEELVVSASCK 12 1 0 Unmodified _NNEELVVSASCK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.322 2 675.321916 1348.62928 NaN NaN NaN 0.5118 0.00034563 NaN NaN NaN NaN 48.233 0.56939 48.233 47.997 48.567 -3.8147E-06 0 0 0 0.0022884 1 23569 68.355 63.904 1 NaN NaN 0 1624900 1624900 0 26695 1275 10068 10349 41797 41797 NNEELVVSASCK 12 1 0 Unmodified _NNEELVVSASCK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.3218 2 675.321916 1348.62928 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.633 1 48.633 48.133 49.133 0 0 0 0 0.03023 1 23120 45.661 40.602 1 26696 1275 10068 10349 41798 41798 NNEELVVSASCK 12 1 0 Unmodified _NNEELVVSASCK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.3222 2 675.321916 1348.62928 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.668 1 48.668 48.168 49.168 0 0 0 0 0.0010787 1 23143 72.289 65.358 1 26697 1275 10068 10349 41799 41799 NNELIAVGK 9 1 0 Unmodified _NNELIAVGK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.2716 2 479.271824 956.529095 87460.85 0.14023 6.7209E-05 0.0073393 3.5175E-06 0.14757 7.0727E-05 479.271993684037 483.278857237486 47.937 0.61086 47.937 47.782 48.393 0 188 53 5 0 0 0 0.001665 2 26054 82.452 67.192 1 2.0631 2.2612 0 52670000 20066000 32604000 26698 979 10069 10350 41800;41801 41800 NNELIAVGK 9 1 0 Unmodified _NNELIAVGK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.279 2 479.271824 956.529095 88396.12 0.25008 0.00011985 2.4124 0.0011562 2.6625 0.001276 479.271861808272 483.278857076018 54.726 0.81158 54.726 54.273 55.084 0 244 53 7 0 0 0 0.0018407 2 27232 80.165 64.784 1 1.7817 1.4175 0 6658800 2501400 4157400 26699 979 10069 10350 41802;41803 41802 NNELIAVGK 9 1 0 Unmodified _NNELIAVGK_ 0 0 0 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.2789 2 479.271824 956.529095 88696.05 0.20829 9.9825E-05 2.3816 0.0011414 2.5898 0.0012412 479.271763688762 483.278714886989 54.948 0.77718 54.948 54.53 55.308 3.8147E-06 256 56 7 0 0 0 0.012915 3 26843 57.047 42.272 1 1.6464 1.3478 0 4888900 1669600 3219300 26700 979 10069 10350 41804;41805;41806 41805 NNFAVGYR 8 0 1 Unmodified _NNFAVGYR_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.7357 2 470.735409 939.456264 87325.41 0.49156 0.0002314 -0.046358 -2.1822E-05 0.44521 0.00020957 470.735244236948 475.739455204061 41.517 0.74588 41.517 41.225 41.971 3.8147E-06 329 61 7 0 0 0 0.00062976 2 21795 129.67 64.891 1 2.0947 2.4795 0 360240000 105570000 254660000 26701 28 10070 10351 41807;41808 41808 NNFAVGYR 8 0 1 Unmodified _NNFAVGYR_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.7353 2 470.735409 939.456264 87072.28 0.24867 0.00011706 0.067601 3.1822E-05 0.31627 0.00014888 470.735339379159 475.739473781272 40.235 0.79719 40.235 40.016 40.813 0 371 64 9 0 0 0 1.6499E-05 2 21423 143.37 80.389 1 2.0409 2.3789 0 472340000 144530000 327810000 26702 28 10070 10351 41809;41810 41810 NNFAVGYR 8 0 1 Unmodified _NNFAVGYR_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.7399 2 470.735409 939.456264 86649.13 0.010144 4.7752E-06 0.29062 0.00013681 0.30077 0.00014158 470.735484796106 475.739587221907 47.231 0.88489 47.231 47.011 47.896 0 327 65 9 0 0 0 0.049816 2 22776 43.814 22.458 1 3.0105 2.4776 0 17958000 4459500 13499000 26703 28 10070 10351 41811;41812 41811 NNFAVGYR 8 0 1 Unmodified _NNFAVGYR_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.7393 2 470.735409 939.456264 87863.25 -0.019625 -9.2381E-06 0.19616 9.2341E-05 0.17654 8.3103E-05 470.735447519847 475.739561447214 47.271 1.0303 47.271 46.982 48.013 0 340 80 7 0 0 0 0.01271 1 22251 66.993 33.478 1 2.8991 2.3637 0 9510800 2444000 7066900 26704 28 10070 10351 41813 41813 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.4001 3 808.392389 2422.15534 69555.63 1.1765 0.00095109 0.39384 0.00031838 1.5704 0.0012695 809.061591713462 811.397932618876 115.82 0.63951 115.82 115.43 116.06 0 96 41 7 0 0 0 0.0016123 1 73790 24.875 24.875 1 0.91439 0.90304 0 8433300 4296200 4137100 26705 1652 10071 10352 41814 41814 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.0639 3 808.392389 2422.15534 68236.16 0.68852 0.00055659 0.20496 0.00016569 0.89348 0.00072228 808.392107046065 811.398725076909 114.8 1.1271 114.8 114.08 115.21 0 253 74 7 0 0 0 7.8419E-12 1 74711 92.95 92.95 1 0.85892 0.89494 0 19093000 9345400 9747700 26706 1652 10071 10352 41815 41815 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.7274 3 808.392389 2422.15534 68256.86 0.76438 0.00061792 0.20346 0.00016447 0.96784 0.00078239 808.726406578152 811.06381646153 115.53 0.85258 115.53 115.19 116.05 7.6294E-06 188 55 7 0 0 0 2.1039E-08 2 75372 65.454 65.454 1 0.7649 0.76419 0 15187000 8252700 6934100 26707 1652 10071 10352 41816;41817 41816 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.7264 3 808.392389 2422.15534 68171.63 0.5896 0.00047663 0.2054 0.00016605 0.795 0.00064267 808.726809740929 811.397859455789 116.86 0.64352 116.86 116.56 117.21 -7.6294E-06 99 39 4 0 0 0 0.0065059 1 76502 22.801 22.801 1 0.78493 0.78514 0 14032000 6896200 7135700 26708 1652 10071 10352 41818 41818 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.3977 3 808.392389 2422.15534 68620.43 0.65404 0.00052872 0.19501 0.00015765 0.84905 0.00068637 808.393006926044 811.397788368464 117.49 0.71571 117.49 117.19 117.91 0 211 45 8 0 0 0 0.0010904 1 77037 28.831 27.762 1 0.96917 0.96743 0 14748000 8111600 6636000 26709 1652 10071 10352 41819 41819 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.3973 3 808.392389 2422.15534 68342.3 0.54163 0.00043785 -0.091278 -7.3788E-05 0.45035 0.00036406 808.726504489659 811.398249975671 118.22 0.85948 118.22 117.91 118.77 7.6294E-06 268 53 8 0 0 0 2.5532E-16 3 77718 106.73 106.73 1 0.96618 0.96613 0 14059000 5353900 8705300 26710 1652 10071 10352 41820;41821;41822 41822 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.0648 3 808.392389 2422.15534 73225.12 0.6239 0.00050435 -0.54213 -0.00043826 0.081761 6.6095E-05 809.059329106973 811.06476783518 129.39 0.30359 129.39 129.29 129.6 0 34 15 5 0 0 0 0.021243 1 86456 18.251 18.251 1 2.3155 2.5554 0 2654100 759940 1894200 26711 1652 10071 10352 41823 41823 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.727 3 808.392389 2422.15534 NaN NaN NaN -0.33096 -0.00026755 NaN NaN NaN NaN 119.94 0.95503 119.94 119.5 120.45 0 0 0 0 0.0021995 1 79190 37.169 28.568 1 NaN NaN 0 6521600 6521600 0 26712 1652 10071 10352 41824 41824 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.7309 3 808.392389 2422.15534 NaN NaN NaN -2.0213 -0.001634 NaN NaN NaN NaN 122.97 0.42032 122.97 122.81 123.23 -7.6294E-06 0 0 0 0.0022945 2 81722 36.923 32.971 1 NaN NaN 0 5977900 0 5977900 26713 1652 10071 10352 41825;41826 41826 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.3917 3 808.392389 2422.15534 NaN NaN NaN -0.14901 -0.00012046 NaN NaN NaN NaN 124.24 0.2483 124.24 124.04 124.29 7.6294E-06 0 0 0 0.0048862 1 82602 30.21 25.684 1 NaN NaN 0 3574800 3574800 0 26714 1652 10071 10352 41827 41827 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.3993 3 808.392389 2422.15534 67207.62 0.7367 0.00059554 0.08892 7.1882E-05 0.82562 0.00066742 808.726784130992 811.398515612903 125.13 0.85339 125.13 124.86 125.71 0 233 34 12 0 0 0 7.6076E-30 2 74994 134.29 134.29 1 1.1063 0.90445 0 34220000 16880000 17340000 26715 1652 10071 10352 41828;41829 41829 NNFSDTGNFGFGIQEHIDLGIK 22 1 0 Unmodified _NNFSDTGNFGFGIQEHIDLGIK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.3993 3 808.392389 2422.15534 67926 0.75883 0.00061343 0.2356 0.00019046 0.99443 0.00080389 808.726802526376 811.398894274424 124.95 0.7611 124.95 124.73 125.49 0 245 33 11 0 0 0 9.6668E-09 2 74029 72.09 72.09 1 1.15 0.94379 0 27556000 13291000 14265000 26716 1652 10071 10352 41830;41831 41831 NNICSQPDLHAIGLSIIPAR 20 0 1 Unmodified _NNICSQPDLHAIGLSIIPAR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.7231 3 730.388033 2188.14227 70735.13 0.8639 0.00063098 -0.3173 -0.00023175 0.5466 0.00039923 730.72185437405 733.724104296373 109.24 0.50996 109.24 108.97 109.48 0 134 33 6 0 0 0 1.0215E-23 2 68406 111.95 111.95 1 0.4464 0.45195 0 17977000 13185000 4792000 26717 118 10072 10353 41832;41833 41833 NNICSQPDLHAIGLSIIPAR 20 0 1 Unmodified _NNICSQPDLHAIGLSIIPAR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.0591 3 730.388033 2188.14227 70445.4 0.62539 0.00045678 -0.60652 -0.000443 0.018867 1.3781E-05 730.721211785852 734.058467881558 108.64 0.5021 108.64 108.33 108.83 0 161 33 8 0 0 0 2.5833E-09 3 69581 83.849 83.849 1 0.46715 0.48321 0 21700000 13892000 7808000 26718 118 10072 10353 41834;41835;41836 41835 NNICSQPDLHAIGLSIIPAR 20 0 1 Unmodified _NNICSQPDLHAIGLSIIPAR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 734.0588 3 730.388033 2188.14227 69630.22 0.74858 0.00054675 -0.3183 -0.00023248 0.43028 0.00031427 730.721860635084 734.058532852091 119.98 0.7526 119.98 119.67 120.42 0 184 35 11 0 0 0 1.6135E-42 2 71114 132.59 132.59 1 0.89248 0.72793 0 14896000 7742100 7153700 26719 118 10072 10353 41837;41838 41838 NNICSQPDLHAIGLSIIPAR 20 0 1 Unmodified _NNICSQPDLHAIGLSIIPAR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.7235 3 730.388033 2188.14227 69989.3 0.76264 0.00055702 -0.26754 -0.00019541 0.4951 0.00036161 730.722255358961 733.724023467267 119.76 0.56586 119.76 119.45 120.02 -7.6294E-06 119 24 7 0 0 0 9.8672E-08 2 70026 65.784 65.784 1 0.92798 0.78818 0 19031000 10521000 8510700 26720 118 10072 10353 41839;41840 41840 NNIPYFETSAK 11 1 0 Unmodified _NNIPYFETSAK_ 0 0 0 A0A158RFU6;P51149;C9J8S3;B4DPH9;C9IZZ0;C9J4V0 A0A158RFU6 A0A158RFU6 RAB7A Ras-related protein Rab-7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3176 2 642.31696 1282.61937 75838.95 0.57581 0.00036985 -0.30208 -0.00019403 0.27373 0.00017582 642.317896741761 646.324404615303 67.499 0.53747 67.499 67.116 67.653 0 121 42 6 0 0 0 0.0014838 2 39969 77.677 42.382 1 1.6127 1.6433 0 26023000 10777000 15246000 26721 628 10073 10354 41841;41842 41842 NNLIYQVDTLK 11 1 0 Unmodified _NNLIYQVDTLK_ 0 0 0 C9JSU1;A0A1S5UZ17;A0A024R2K4;Q9Y608;H7C3N9 C9JSU1 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.3708 2 660.861534 1319.70852 81497.05 0.81172 0.00053643 0.85396 0.00056435 1.6657 0.0011008 660.861964285902 664.868916517011 86.859 0.36001 86.859 86.6 86.96 0 57 25 4 0 0 0 0.0019892 1 52330 63.283 56.615 1 1.0742 1.0907 0 6169200 3318000 2851200 26722 114 10074 10355 41843 41843 NNLIYQVDTLK 11 1 0 Unmodified _NNLIYQVDTLK_ 0 0 0 C9JSU1;A0A1S5UZ17;A0A024R2K4;Q9Y608;H7C3N9 C9JSU1 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8685 2 660.861534 1319.70852 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.79 1 85.79 85.29 86.29 0 0 0 0 0.024585 1 52849 51.445 15.502 1 26723 114 10074 10355 41844 41844 NNMFEISDR 9 0 1 Oxidation (M) _NNM(ox)FEISDR_ NNM(1)FEISDR NNM(78.33)FEISDR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.2509 2 571.250763 1140.48697 80093.57 0.76331 0.00043604 -0.10291 -5.879E-05 0.66039 0.00037725 571.250621689419 576.254894166255 42.081 0.53352 42.081 41.818 42.352 0 212 39 7 0 0 0 0.00095994 2 22208 78.334 68.747 1 1.1222 1.2721 0 107110000 46874000 60239000 26724 2070 10075 10356 41845;41846 41846 1906 NNMFEISDR 9 0 1 Oxidation (M) _NNM(ox)FEISDR_ NNM(1)FEISDR NNM(79.89)FEISDR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.2508 2 571.250763 1140.48697 80262.75 0.72447 0.00041385 -0.28833 -0.00016471 0.43614 0.00024914 571.250632965182 576.254895487915 40.722 0.60973 40.722 40.556 41.166 0 225 45 7 0 0 0 0.00090195 3 21748 79.893 73.443 1 1.2919 1.4837 0 78693000 36769000 41924000 26725 2070 10075 10356 41847;41848;41849 41847 1906 NNMFEISDR 9 0 1 Oxidation (M) _NNM(ox)FEISDR_ NNM(1)FEISDR NNM(90.66)FEISDR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.2504 2 571.250763 1140.48697 80688.59 0.87173 0.00049798 -0.008688 -4.963E-06 0.86304 0.00049301 571.250751502847 576.254790330212 41.483 0.93275 41.483 41.127 42.06 0 312 82 6 0 0 0 0.00050975 2 22259 90.657 82.316 1 1.1939 1.3053 0 35661000 16942000 18720000 26726 2070 10075 10356 41850;41851 41850 1906 NNMFEISDR 9 0 1 Oxidation (M) _NNM(ox)FEISDR_ NNM(1)FEISDR NNM(48.79)FEISDR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.2556 2 571.250763 1140.48697 81713.61 0.3197 0.00018263 0.1639 9.3631E-05 0.48361 0.00027626 571.250655515162 576.255041303143 48.854 0.91722 48.854 48.406 49.323 -3.8147E-06 257 72 5 0 0 0 0.011195 1 23711 48.794 42.344 1 1.1418 0.95672 0 4041600 2060500 1981100 26727 2070 10075 10356 41852 41852 1906 NNMFEISDR 9 0 1 Oxidation (M) _NNM(ox)FEISDR_ NNM(1)FEISDR NNM(44.75)FEISDR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.2554 2 571.250763 1140.48697 82113.58 0.58274 0.00033289 -0.063779 -3.6434E-05 0.51897 0.00029646 571.250654263942 576.254944705615 74.189 0.5752 74.189 73.93 74.505 0 139 37 6 0 0 0 0.016088 1 39271 44.753 35.165 1 1.9375 1.6865 0 1905000 656400 1248600 26728 2070 10075 10356 41853 41853 1906 NNMFEISDR 9 0 1 Unmodified _NNMFEISDR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.2578 2 563.253305 1124.49206 80302.11 0.68249 0.00038441 -0.18601 -0.00010477 0.49648 0.00027965 563.253139935772 568.257333649579 74.174 0.88406 74.174 73.869 74.753 0 249 59 7 0 0 0 0.0017345 2 39291 81.548 77.191 1 1.8368 1.5749 0 6174800 2173300 4001500 26729 2070 10075 10357 41854;41855 41854 NNMFEISDR 9 0 1 Unmodified _NNMFEISDR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.2538 2 563.253305 1124.49206 80642.79 0.45108 0.00025407 -0.021438 -1.2075E-05 0.42964 0.000242 563.253190546128 568.257440496034 74.583 0.80677 74.583 74.268 75.074 0 184 48 7 0 0 0 0.013178 1 38809 56.81 55.027 1 1.9307 1.6027 0 5824300 2247500 3576700 26730 2070 10075 10357 41856 41856 NNNPLYSR 8 0 1 Unmodified _NNNPLYSR_ 0 0 0 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.248 2 489.243598 976.472643 NaN NaN NaN 0.48048 0.00023507 NaN NaN NaN NaN 27.261 0.5608 27.261 26.893 27.454 0 0 0 0 0.0057749 1 12457 87.181 50.022 1 NaN NaN 0 13848000 0 13848000 26731 491 10076 10358 41857 41857 NNNPLYSR 8 0 1 Unmodified _NNNPLYSR_ 0 0 0 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.248 2 489.243598 976.472643 86408.7 -0.032889 -1.6091E-05 0.78566 0.00038438 0.75277 0.00036829 489.243964320058 494.248001637695 30.491 0.90742 30.491 30.237 31.144 -1.9073E-06 157 52 6 0 0 0 0.022631 1 12096 57.047 34.556 1 1.2433 1.0712 0 4404600 1772400 2632200 26732 491 10076 10358 41858 41858 NNPPTLVGDFTK 12 1 0 Unmodified _NNPPTLVGDFTK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q96SR7 Q8NBY1 Q8NBY1 STK26 Serine/threonine-protein kinase 26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8373 2 651.838059 1301.66157 74406.16 0.71554 0.00046642 -0.40994 -0.00026721 0.3056 0.0001992 651.837056645217 655.844942223369 77.987 0.63085 77.987 77.663 78.294 0 187 50 6 0 0 0 0.00077083 2 46005 66.056 66.056 1 2.139 2.1317 0 26321000 8392700 17928000 26733 1065 10077 10359 41859;41860 41860 NNPPTLVGDFTK 12 1 0 Unmodified _NNPPTLVGDFTK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q96SR7 Q8NBY1 Q8NBY1 STK26 Serine/threonine-protein kinase 26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8378 2 651.838059 1301.66157 74961.46 0.54179 0.00035316 0.031121 2.0286E-05 0.57291 0.00037344 651.837106535242 655.845168454891 76.933 0.73279 76.933 76.575 77.308 -7.6294E-06 178 57 5 0 0 0 0.00072344 2 46415 66.758 57.843 1 2.3137 2.3818 0 32447000 10571000 21875000 26734 1065 10077 10359 41861;41862 41862 NNQFQALLQYADPVSAQHAK 20 1 0 Unmodified _NNQFQALLQYADPVSAQHAK_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;K7EK45;A0A087WU68;Q59H49;K7EKJ7 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.3846 3 748.378303 2242.11308 70755.05 0.64033 0.00047921 0.10822 8.0989E-05 0.74855 0.0005602 748.712609787707 751.384105825839 108.26 0.62955 108.26 108.02 108.65 7.6294E-06 218 42 7 0 0 0 7.3559E-07 1 69175 67.396 67.396 1 1.9412 1.9763 0 26102000 9248000 16854000 26735 592 10078 10360 41863 41863 NNQFQALLQYADPVSAQHAK 20 1 0 Unmodified _NNQFQALLQYADPVSAQHAK_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;K7EK45;A0A087WU68;Q59H49;K7EKJ7 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.3848 3 748.378303 2242.11308 71143.35 0.69986 0.00052376 -0.14191 -0.00010621 0.55794 0.00041755 748.712514585349 751.38371498802 120.2 0.44978 120.2 119.99 120.44 0 135 19 10 0 0 0 3.6777E-05 2 71282 42.705 42.705 1 1.2559 1.0011 0 9663100 4060200 5602900 26736 592 10078 10360 41864;41865 41864 NNQFQALLQYADPVSAQHAK 20 1 0 Unmodified _NNQFQALLQYADPVSAQHAK_ 0 0 0 A6NLN1;A0A0U1RRM4;P26599;K7EK45;A0A087WU68;Q59H49;K7EKJ7 A6NLN1 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.3778 3 748.378303 2242.11308 70946.38 0.71526 0.00053529 -0.21338 -0.00015969 0.50188 0.0003756 748.712398017264 751.383856200231 119.89 0.43777 119.89 119.72 120.16 0 113 17 10 0 0 0 0.00071117 2 70241 33.37 33.37 1 1.3519 1.1116 0 9961600 3846000 6115600 26737 592 10078 10360 41866;41867 41867 NNQGTVNWSVDDIVK 15 1 0 Unmodified _NNQGTVNWSVDDIVK_ 0 0 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.9241 2 844.915558 1687.81656 NaN NaN NaN 0.52097 0.00044018 NaN NaN NaN NaN 94.459 0.59805 94.459 94.148 94.747 0 0 0 0 3.5887E-07 3 58772 101.39 94.731 1 NaN NaN 0 14210000 0 14210000 26738 769 10079 10361 41868;41869;41870 41870 NNQGTVNWSVDDIVK 15 1 0 Unmodified _NNQGTVNWSVDDIVK_ 0 0 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.9234 2 844.915558 1687.81656 67395.66 0.82005 0.00069287 0.19111 0.00016147 1.0112 0.00085435 844.915852996482 848.922521402582 108.55 0.50079 108.55 108.31 108.81 0 123 24 8 0 0 0 0.00031303 2 62353 60.161 60.161 1 0.97142 0.76513 0 10966000 5539700 5426400 26739 769 10079 10361 41871;41872 41872 NNSELLNNLGNFINR 15 0 1 Unmodified _NNSELLNNLGNFINR_ 0 0 0 A8K492;P56192;B4DF61 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.9483 2 866.442274 1730.87 64933.38 0.8056 0.00069801 -0.020037 -1.7361E-05 0.78557 0.00068065 866.442473585388 871.446474895183 113.09 0.51157 113.09 112.86 113.37 7.6294E-06 132 36 6 0 0 0 1.3026E-30 1 71470 157.38 145.51 1 2.9487 3.0088 0 14715000 5284800 9430400 26740 732 10080 10362 41873 41873 NNSELLNNLGNFINR 15 0 1 Unmodified _NNSELLNNLGNFINR_ 0 0 0 A8K492;P56192;B4DF61 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.4415 2 866.442274 1730.87 65842.27 0.70603 0.00061173 -0.079346 -6.8749E-05 0.62668 0.00054298 866.442007811859 871.446578771391 112.55 0.46843 112.55 112.3 112.77 0 130 33 5 0 0 0 0.00022024 1 72791 85.355 79.861 1 3.0885 3.2609 0 23454000 6323700 17130000 26741 732 10080 10362 41874 41874 NNSELLNNLGNFINR 15 0 1 Unmodified _NNSELLNNLGNFINR_ 0 0 0 A8K492;P56192;B4DF61 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 871.447 2 866.442274 1730.87 66974.15 0.61621 0.00053391 0.15816 0.00013704 0.77437 0.00067095 866.442722414403 871.446970365382 124.61 0.73336 124.61 124.15 124.88 0 108 31 6 0 0 0 1.6797E-05 1 74639 87.878 82.155 1 1.451 1.2454 0 8264700 3516300 4748400 26742 732 10080 10362 41875 41875 NNSELLNNLGNFINR 15 0 1 Unmodified _NNSELLNNLGNFINR_ 0 0 0 A8K492;P56192;B4DF61 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 871.4494 2 866.442274 1730.87 66738 0.47633 0.00041272 0.45976 0.00039836 0.93609 0.00081107 866.944034153323 871.447005428856 124.42 0.59644 124.42 124.08 124.68 -7.6294E-06 93 25 6 0 0 0 0.00030865 2 73599 60.255 54.532 1 1.4692 1.2214 0 7547600 2415200 5132400 26743 732 10080 10362 41876;41877 41876 NNSGEEFDCAFR 12 0 1 Unmodified _NNSGEEFDCAFR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.2911 2 723.291147 1444.56774 71203.51 0.57173 0.00041353 -0.41554 -0.00030056 0.15619 0.00011297 723.291160301046 728.294906138688 58.707 0.5836 58.707 58.435 59.018 0 247 48 6 0 0 0 0.00024208 1 33312 87.298 82.847 1 1.2679 1.3069 0 24420000 10106000 14314000 26744 1694 10081 10363 41878 41878 NNSGEEFDCAFR 12 0 1 Unmodified _NNSGEEFDCAFR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.2985 2 723.291147 1444.56774 72676.7 0.66491 0.00048092 -0.17096 -0.00012366 0.49394 0.00035727 723.290911366865 728.294942220235 57.704 0.45412 57.704 57.465 57.919 -3.8147E-06 186 36 9 0 0 0 1.6602E-08 2 33457 121.6 117.15 1 1.3837 1.5451 0 44348000 18147000 26202000 26745 1694 10081 10363 41879;41880 41880 NNSGEEFDCAFR 12 0 1 Unmodified _NNSGEEFDCAFR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.2956 2 723.291147 1444.56774 72918.84 0.63896 0.00046215 -0.30778 -0.00022261 0.33118 0.00023954 723.290920946934 728.295128435513 68.285 0.53674 68.285 68.067 68.604 0 172 38 6 0 0 0 0.0067883 1 35619 48.981 45.725 1 0.65726 0.55155 0 4194400 2568400 1626000 26746 1694 10081 10363 41881 41881 NNSGEEFDCAFR 12 0 1 Unmodified _NNSGEEFDCAFR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.2959 2 723.291147 1444.56774 72742.67 0.60505 0.00043763 -0.21558 -0.00015592 0.38948 0.00028171 723.291130871389 728.295041573032 68.844 0.59923 68.844 68.6 69.199 0 188 42 6 0 0 0 0.0098235 1 35199 46.844 45.036 1 0.64263 0.55032 0 2851300 1602700 1248600 26747 1694 10081 10363 41882 41882 NNSVILADEMGLGK 14 1 0 Oxidation (M) _NNSVILADEM(ox)GLGK_ NNSVILADEM(1)GLGK NNSVILADEM(103.43)GLGK 0 1 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.8713 2 738.871773 1475.72899 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.517 1 68.517 68.017 69.017 -7.6294E-06 0 0 0 3.9529E-07 1 40722 103.43 65.13 1 26748 354 10082 10364 41883 41883 266 NNSVILADEMGLGK 14 1 0 Oxidation (M) _NNSVILADEM(ox)GLGK_ NNSVILADEM(1)GLGK NNSVILADEM(100.93)GLGK 0 1 0 A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 A0A024RC75 A0A024RC75 CHD2 Chromodomain-helicase-DNA-binding protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.8722 2 738.871773 1475.72899 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.525 1 68.525 68.025 69.025 0 0 0 0 6.1768E-07 1 40727 100.93 64.597 1 26749 354 10082 10364 41884 41884 266 NNTQVLINCR 10 0 1 Unmodified _NNTQVLINCR_ 0 0 0 P62316;K7ERG4 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.3142 2 616.314229 1230.6139 79222.99 0.36039 0.00022212 -0.43389 -0.00026741 -0.073497 -4.5297E-05 616.314262527219 621.317854065699 39.76 0.4863 39.76 39.527 40.013 0 137 40 5 0 0 0 1.224E-09 1 20649 132.76 126.45 1 1.0846 1.1307 0 21311000 10956000 10355000 26750 1645 10083 10365 41885 41885 NNTQVLINCR 10 0 1 Unmodified _NNTQVLINCR_ 0 0 0 P62316;K7ERG4 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.3137 2 616.314229 1230.6139 75151.75 0.16405 0.00010111 -0.087621 -5.4002E-05 0.076429 4.7104E-05 616.314639354675 621.317308019399 38.741 0.62526 38.741 38.524 39.149 0 141 52 5 0 0 0 1.1124E-09 1 20393 133.23 127.37 1 1.019 1.1161 0 31882000 16238000 15644000 26751 1645 10083 10365 41886 41886 NNTQVLINCR 10 0 1 Unmodified _NNTQVLINCR_ 0 0 0 P62316;K7ERG4 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.3145 2 616.314229 1230.6139 76724.47 0.36476 0.00022481 -0.37929 -0.00023376 -0.014526 -8.9527E-06 616.314145699391 621.318656830847 45.358 0.52052 45.358 45.07 45.591 0 111 36 5 0 0 0 0.0008705 1 21690 79.893 75.28 1 0.7966 0.6879 0 2632900 1399200 1233700 26752 1645 10083 10365 41887 41887 NNTQVLINCR 10 0 1 Unmodified _NNTQVLINCR_ 0 0 0 P62316;K7ERG4 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.3147 2 616.314229 1230.6139 76504.66 0.65197 0.00040182 -0.21859 -0.00013472 0.43337 0.00026709 616.31407367691 621.31841325077 45.453 0.44713 45.453 45.208 45.655 0 104 29 5 0 0 0 0.00097153 1 21212 78.264 73.651 1 0.73463 0.63119 0 2799900 1579500 1220400 26753 1645 10083 10365 41888 41888 NNTVGLIQLNRPK 13 1 1 Unmodified _NNTVGLIQLNRPK_ 0 0 1 P30084 P30084 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.9389 2 733.925532 1465.83651 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.952 1 60.952 60.452 61.452 -3.8147E-06 0 0 0 0.016304 1 34813 60.064 48.701 1 26754 1533 10084 10366 41889 41889 NNVNVASLTQSEIR 14 0 1 Unmodified _NNVNVASLTQSEIR_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.9073 2 772.904993 1543.79543 68545.05 0.84231 0.00065103 0.054386 4.2035E-05 0.8967 0.00069306 772.90516697684 777.909256535292 76.447 0.52417 76.447 76.227 76.751 0 215 42 7 0 0 0 1.5063E-29 2 44984 153.95 153.95 1 0.90632 0.95894 0 41002000 22471000 18531000 26755 1854 10085 10367 41890;41891 41891 NNVNVASLTQSEIR 14 0 1 Unmodified _NNVNVASLTQSEIR_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.9098 2 772.904993 1543.79543 68929.14 0.78095 0.0006036 0.0072914 5.6356E-06 0.78824 0.00060923 772.904770884449 777.909353254159 88.066 0.50282 88.066 87.834 88.337 0 153 30 7 0 0 0 2.7509E-09 2 48508 115.29 115.29 1 0.93198 0.80187 0 7564300 3992200 3572100 26756 1854 10085 10367 41892;41893 41893 NNVNVASLTQSEIR 14 0 1 Unmodified _NNVNVASLTQSEIR_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 777.9104 2 772.904993 1543.79543 69292.26 0.66665 0.00051526 0.46557 0.00035984 1.1322 0.0008751 772.905140994152 777.909898346361 88.123 0.5365 88.123 87.84 88.376 0 140 30 7 0 0 0 1.8351E-05 2 47693 97.911 90.266 1 0.9257 0.77032 0 7259000 3702100 3556900 26757 1854 10085 10367 41894;41895 41895 NNVSSVSTTGTATDLESSAK 20 1 0 Unmodified _NNVSSVSTTGTATDLESSAK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.4736 2 984.971455 1967.92836 62084.64 0.020002 1.9701E-05 0.15789 0.00015551 0.17789 0.00017521 984.971653154586 988.978708057914 52.722 0.4051 52.722 52.51 52.915 0 147 28 8 0 0 0 1.6232E-06 2 29259 73.022 73.022 1 0.89021 0.87273 0 20701000 11340000 9361600 26758 1680 10086 10368 41896;41897 41896 NNVSSVSTTGTATDLESSAK 20 1 0 Unmodified _NNVSSVSTTGTATDLESSAK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 985.4737 2 984.971455 1967.92836 62288.42 0.05399 5.3179E-05 -0.21835 -0.00021507 -0.16436 -0.00016189 985.472316830713 988.978451189059 51.789 0.46197 51.789 51.555 52.017 0 180 38 6 0 0 0 8.6505E-10 4 29341 98.943 98.943 1 0.92038 0.96854 0 23871000 14578000 9293500 26759 1680 10086 10368 41898;41899;41900;41901 41900 NNVSSVSTTGTATDLESSAK 20 1 0 Unmodified _NNVSSVSTTGTATDLESSAK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 984.9725 2 984.971455 1967.92836 61150.16 0.084866 8.3591E-05 0.29269 0.00028829 0.37756 0.00037189 984.971823956482 988.97888049642 62.277 0.57478 62.277 61.972 62.547 -3.8147E-06 278 46 8 0 0 0 3.0082E-06 2 31967 62.861 62.861 1 2.2934 1.8328 0 9018500 2901500 6117000 26760 1680 10086 10368 41902;41903 41903 NNVSSVSTTGTATDLESSAK 20 1 0 Unmodified _NNVSSVSTTGTATDLESSAK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 984.9712 2 984.971455 1967.92836 62892.46 -0.015779 -1.5542E-05 0.11228 0.0001106 0.096504 9.5053E-05 984.971286468444 988.978566115855 62.95 0.49671 62.95 62.684 63.18 -3.8147E-06 195 38 7 0 0 0 1.0642E-07 2 31690 86.539 86.539 1 2.1081 1.7195 0 7822000 2989000 4833000 26761 1680 10086 10368 41904;41905 41905 NNVVINYK 8 1 0 Unmodified _NNVVINYK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.2664 2 482.266542 962.51853 87237.5 -0.057701 -2.7827E-05 0.27456 0.00013241 0.21686 0.00010458 482.266631672691 486.273690550089 39.811 0.54128 39.811 39.584 40.125 0 206 44 7 0 0 0 0.005376 2 20778 90.661 69.373 1 0.8996 0.94507 0 30461000 15472000 14989000 26762 1854 10087 10369 41906;41907 41907 NNVVINYK 8 1 0 Unmodified _NNVVINYK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2667 2 482.266542 962.51853 85587.43 0.057862 2.7905E-05 -0.048355 -2.332E-05 0.0095074 4.5851E-06 482.266758654694 486.273179697989 38.858 0.62748 38.858 38.446 39.073 0 194 53 7 0 0 0 0.0043182 2 20442 94.006 72.047 1 0.92617 1.0211 0 43567000 24082000 19485000 26763 1854 10087 10369 41908;41909 41909 NNWEVSALSR 10 0 1 Unmodified _NNWEVSALSR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.2935 2 588.293819 1174.57309 79868.06 0.72724 0.00042783 -0.11892 -6.9962E-05 0.60832 0.00035787 588.29357997383 593.297900845564 68.149 0.72827 68.149 67.691 68.419 0 210 62 5 0 0 0 0.0023969 1 39300 69.275 61.232 1 0.52612 0.52816 0 16065000 10199000 5865000 26764 1665 10088 10370 41910 41910 NNWEVSALSR 10 0 1 Unmodified _NNWEVSALSR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.299 2 588.293819 1174.57309 79807.63 0.45995 0.00027059 0.10357 6.0932E-05 0.56353 0.00033152 588.293611495497 593.298187447782 66.892 0.66339 66.892 66.486 67.149 0 168 57 5 0 0 0 0.0005036 2 39593 85.807 77.321 1 0.53963 0.54227 0 19202000 11359000 7842600 26765 1665 10088 10370 41911;41912 41912 NNWEVSALSR 10 0 1 Unmodified _NNWEVSALSR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.294 2 588.293819 1174.57309 79082.16 0.53484 0.00031464 0.20368 0.00011983 0.73852 0.00043447 588.293666686255 593.298281247403 78.561 1.0212 78.561 78.01 79.031 0 253 67 6 0 0 0 0.042689 1 41167 37.696 37.696 1 0.59388 0.5075 0 4514800 2665400 1849400 26766 1665 10088 10370 41913 41913 NPASLPLTQAALK 13 1 0 Unmodified _NPASLPLTQAALK_ 0 0 0 Q13428;Q59FZ2 Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.3929 2 662.385177 1322.7558 77017.29 0.42145 0.00027916 -0.2996 -0.00019845 0.12185 8.0712E-05 662.38429331506 666.392255105229 96.854 0.52932 96.854 96.638 97.167 7.6294E-06 59 24 4 0 0 0 0.028701 1 53657 33.87 31.346 1 1.313 1.1543 0 1256300 511770 744510 26767 1712 10089 10371 41914 41914 NPDDITNEEYGEFYK 15 1 0 Unmodified _NPDDITNEEYGEFYK_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 921.4017 2 917.394321 1832.77409 64343.54 0.70296 0.00064489 -0.15594 -0.00014306 0.54702 0.00050183 917.393826604143 921.401289332654 79.594 0.57375 79.594 79.337 79.911 0 263 49 7 0 0 0 6.7285E-16 2 47085 136.38 136.38 1 3.1542 3.2785 0 29571000 7502900 22068000 26768 1348 10090 10372 41915;41916 41916 NPDDITNEEYGEFYK 15 1 0 Unmodified _NPDDITNEEYGEFYK_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 917.3962 2 917.394321 1832.77409 63916.3 0.62055 0.00056929 -0.14934 -0.000137 0.47121 0.00043229 917.394008467212 921.401239710702 78.673 0.66373 78.673 78.408 79.072 0 303 59 7 0 0 0 2.2135E-15 4 47675 132.79 132.79 1 3.1764 3.416 0 37612000 10317000 27295000 26769 1348 10090 10372 41917;41918;41919;41920 41919 NPDDITNEEYGEFYK 15 1 0 Unmodified _NPDDITNEEYGEFYK_ 0 0 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 921.4027 2 917.394321 1832.77409 64385.57 0.71238 0.00065353 -0.23518 -0.00021576 0.4772 0.00043778 917.393745685488 921.401151840553 91.253 0.57957 91.253 90.962 91.542 0 225 38 9 0 0 0 0.057053 1 50541 23.092 23.092 1 1.9276 1.535 0 6730000 2535500 4194500 26770 1348 10090 10372 41921 41921 NPDDITQEEYGEFYK 15 1 0 Unmodified _NPDDITQEEYGEFYK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 928.4104 2 924.402146 1846.78974 63400.35 0.49333 0.00045603 0.075134 6.9454E-05 0.56846 0.00052549 924.402130669045 928.409220924443 81.171 1.2863 81.171 80.76 82.046 0 688 110 10 0 0 0 3.4392E-84 4 48641 215.53 209.68 1 2.253 2.5836 0 194470000 58900000 135570000 26771 379 10091 10373 41922;41923;41924;41925 41923 NPDDITQEEYGEFYK 15 1 0 Unmodified _NPDDITQEEYGEFYK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 924.4044 2 924.402146 1846.78974 63313.16 0.53061 0.0004905 0.11824 0.0001093 0.64886 0.0005998 924.402116891368 928.409300739597 80.329 1.2655 80.329 79.928 81.193 0 632 102 9 0 0 0 1.5799E-30 3 49285 156.14 156.14 1 2.3027 2.6641 0 203810000 62425000 141390000 26772 379 10091 10373 41926;41927;41928 41928 NPDDITQEEYGEFYK 15 1 0 Unmodified _NPDDITQEEYGEFYK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 928.4094 2 924.402146 1846.78974 62630.41 0.61912 0.00057232 -0.083127 -7.6842E-05 0.536 0.00049548 924.903576874606 928.409036448776 93.117 1.4912 93.117 92.548 94.039 0 474 94 10 0 0 0 0.00046312 2 51789 56.951 46.865 1 1.5455 1.2725 0 40241000 17338000 22903000 26773 379 10091 10373 41929;41930 41929 NPDDITQEEYGEFYK 15 1 0 Unmodified _NPDDITQEEYGEFYK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 924.4028 2 924.402146 1846.78974 63208.97 0.29867 0.00027609 0.14305 0.00013223 0.44171 0.00040832 924.90372471049 928.409269762491 93.138 1.0516 93.138 92.809 93.861 0 427 68 10 0 0 0 6.8287E-05 2 51004 84.365 83.96 1 1.5018 1.2497 0 39028000 15937000 23091000 26774 379 10091 10373 41931;41932 41932 NPDEFYYK 8 1 0 Unmodified _NPDEFYYK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.2468 2 538.24019 1074.46583 83053.87 0.78646 0.0004233 -0.22362 -0.00012036 0.56284 0.00030294 538.240127683257 542.247092901637 46.576 0.81752 46.576 46.201 47.019 -3.8147E-06 269 71 6 0 0 0 0.017078 2 25091 60.682 53.114 1 1.0138 1.094 0 37240000 17396000 19844000 26775 2132 10092 10374 41933;41934 41934 NPDEFYYK 8 1 0 Unmodified _NPDEFYYK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.247 2 538.24019 1074.46583 82259.61 0.71018 0.00038225 -0.10039 -5.4031E-05 0.6098 0.00032822 538.240109501372 542.247042083885 45.517 0.67829 45.517 45.224 45.902 -3.8147E-06 248 59 7 0 0 0 0.013237 1 24952 65.777 58.882 1 0.97911 1.0934 0 52786000 25904000 26882000 26776 2132 10092 10374 41935 41935 NPDGEPRPWCFTTDPQK 17 1 1 Unmodified _NPDGEPRPWCFTTDPQK_ 0 0 1 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.6454 3 682.310901 2043.91087 NaN NaN NaN -0.32025 -0.00021851 NaN NaN NaN NaN 78.645 0.77232 78.645 78.376 79.149 0 0 0 0 0.042832 1 41327 25.198 23.548 1 NaN NaN 0 6751900 6751900 0 + 26777 1157 10093 10375 41936 41936 NPDNDENGPWCYTTDPDK 18 1 0 Unmodified _NPDNDENGPWCYTTDPDK_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1069.928 2 1069.42382 2136.83308 NaN NaN NaN 0.32538 0.00034797 NaN NaN NaN NaN 67.33 0.080994 67.33 67.282 67.363 7.6294E-06 0 0 0 0.0095771 1 39870 41.621 40.182 1 NaN NaN 0 3689100 3689100 0 + 26778 1157 10094 10376 41937 41937 NPDNDENGPWCYTTDPDK 18 1 0 Unmodified _NPDNDENGPWCYTTDPDK_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1069.9255 2 1069.42382 2136.83308 NaN NaN NaN 0.07962 8.5148E-05 NaN NaN NaN NaN 67.5 0.39749 67.5 67.23 67.627 0 0 0 0 0.041062 1 39909 31.526 31.526 1 NaN NaN 0 4531300 4531300 0 + 26779 1157 10094 10376 41938 41938 NPDQVYLVDYGLAYR 15 0 1 Unmodified _NPDQVYLVDYGLAYR_ 0 0 0 A8K245;Q99986;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 898.4499 2 893.443951 1784.87335 NaN NaN NaN 0.15374 0.00013736 NaN NaN NaN NaN 107.81 0.71388 107.81 107.43 108.14 -7.6294E-06 0 0 0 1.8852E-16 1 67284 129.34 112.4 1 NaN NaN 0 16728000 0 16728000 26780 707 10095 10377 41939 41939 NPDQVYLVDYGLAYR 15 0 1 Unmodified _NPDQVYLVDYGLAYR_ 0 0 0 A8K245;Q99986;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 898.4512 2 893.443951 1784.87335 63513.18 0.68795 0.00061464 0.30231 0.00027009 0.99025 0.00088474 893.945103796788 898.448873300907 119.04 0.56974 119.04 118.74 119.31 0 145 26 9 0 0 0 5.4568E-07 2 70302 101.53 89.629 1 0.98134 0.80572 0 17245000 9359900 7885100 26781 707 10095 10377 41940;41941 41940 NPDQVYLVDYGLAYR 15 0 1 Unmodified _NPDQVYLVDYGLAYR_ 0 0 0 A8K245;Q99986;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 898.9498 2 893.443951 1784.87335 63380.42 0.51073 0.00045631 0.54388 0.00048592 1.0546 0.00094223 893.444464030998 898.448793292548 118.79 0.52229 118.79 118.59 119.11 0 149 23 9 0 0 0 0.00022627 2 69257 73.466 69.126 1 0.94722 0.80362 0 18800000 9809300 8991000 26782 707 10095 10377 41942;41943 41942 NPDSITNQIALLEAR 15 0 1 Unmodified _NPDSITNQIALLEAR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.9464 2 827.941576 1653.8686 66718.03 0.83585 0.00069203 0.11548 9.5608E-05 0.95132 0.00078764 827.941656211351 832.945631480335 107.42 1.3597 107.42 106.77 108.13 0 498 103 9 0 0 0 3.6005E-84 3 66760 215.02 215.02 1 0.81577 0.96198 0 243530000 131560000 111960000 26783 2070 10096 10378 41944;41945;41946 41945 NPDSITNQIALLEAR 15 0 1 Unmodified _NPDSITNQIALLEAR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.9464 2 827.941576 1653.8686 66590.51 0.90464 0.00074899 -0.14054 -0.00011636 0.7641 0.00063263 827.941543159387 832.945501701381 106.82 1.022 106.82 106.48 107.5 0 465 73 10 0 0 0 1.4754E-70 2 67979 203.88 203.88 1 0.80977 0.93903 0 311310000 166960000 144350000 26784 2070 10096 10378 41947;41948 41947 NPDSITNQIALLEAR 15 0 1 Unmodified _NPDSITNQIALLEAR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.9434 2 827.941576 1653.8686 67355.87 0.94027 0.00077849 -0.28762 -0.00023813 0.65265 0.00054036 827.941588555895 832.945650433238 119.03 0.86571 119.03 118.74 119.61 0 276 37 12 0 0 0 7.7139E-39 2 70298 172.33 172.33 1 1.6753 1.453 0 184520000 68676000 115840000 26785 2070 10096 10378 41949;41950 41950 NPDSITNQIALLEAR 15 0 1 Unmodified _NPDSITNQIALLEAR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.9465 2 827.941576 1653.8686 67277.76 0.96609 0.00079986 -0.48521 -0.00040172 0.48088 0.00039814 827.941529627486 832.945491047865 118.87 1.1129 118.87 118.54 119.65 0 298 51 13 0 0 0 2.1471E-115 2 69244 245.15 245.15 1 1.7316 1.5124 0 197310000 76908000 120400000 26786 2070 10096 10378 41951;41952 41952 NPDSQYGELIEK 12 1 0 Unmodified _NPDSQYGELIEK_ 0 0 0 Q5T0D2;B4DDL4;B2R6S5;P30085;B4DFW6 Q5T0D2 Q5T0D2 CMPK1;CMPK UMP-CMP kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8438 2 696.835714 1391.65687 NaN NaN NaN 0.90259 0.00062896 NaN NaN NaN NaN 58.971 0.50056 58.971 58.637 59.138 -3.8147E-06 0 0 0 3.9941E-28 1 33456 143.96 86.371 1 NaN NaN 0 21200000 0 21200000 26787 844 10097 10379 41953 41953 NPDSQYGELIEK 12 1 0 Unmodified _NPDSQYGELIEK_ 0 0 0 Q5T0D2;B4DDL4;B2R6S5;P30085;B4DFW6 Q5T0D2 Q5T0D2 CMPK1;CMPK UMP-CMP kinase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.8353 2 696.835714 1391.65687 NaN NaN NaN -0.85814 -0.00059798 NaN NaN NaN NaN 59.002 0.38977 59.002 58.771 59.16 0 0 0 0 1.0546E-08 1 33520 115.29 82.872 1 NaN NaN 0 8329100 8329100 0 26788 844 10097 10379 41954 41954 NPDSQYGELIEK 12 1 0 Unmodified _NPDSQYGELIEK_ 0 0 0 Q5T0D2;B4DDL4;B2R6S5;P30085;B4DFW6 Q5T0D2 Q5T0D2 CMPK1;CMPK UMP-CMP kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 700.8431 2 696.835714 1391.65687 73516.48 0.45162 0.0003147 0.2649 0.00018459 0.71652 0.0004993 696.835684808265 700.843074874382 68.698 0.35782 68.698 68.453 68.811 0 78 26 6 0 0 0 0.017144 1 35952 41.689 25.551 1 2.505 2.0056 0 2886600 789300 2097300 26789 844 10097 10379 41955 41955 NPDSQYGELIEK 12 1 0 Unmodified _NPDSQYGELIEK_ 0 0 0 Q5T0D2;B4DDL4;B2R6S5;P30085;B4DFW6 Q5T0D2 Q5T0D2 CMPK1;CMPK UMP-CMP kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.844 2 696.835714 1391.65687 71917.45 0.51361 0.0003579 0.58191 0.00040549 1.0955 0.00076339 696.835432992362 700.843759795663 69.258 0.45086 69.258 69.055 69.506 0 95 30 7 0 0 0 0.00058656 2 35495 68.786 41.457 1 2.089 1.6923 0 2959500 960270 1999200 26790 844 10097 10379 41956;41957 41956 NPDTQWITK 9 1 0 Unmodified _NPDTQWITK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.7874 2 551.780013 1101.54547 80343.06 1.0912 0.0006021 -0.4532 -0.00025007 0.638 0.00035203 551.779734172581 555.786812308378 49.826 0.85292 49.826 49.553 50.406 -3.8147E-06 288 71 7 0 0 0 3.6009E-10 3 27364 150.53 132.09 1 0.66685 0.77935 0 279710000 164570000 115140000 26791 121 10098 10380 41958;41959;41960 41958 NPDTQWITK 9 1 0 Unmodified _NPDTQWITK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.7805 2 551.780013 1101.54547 80838.82 0.77461 0.00042741 0.12401 6.8425E-05 0.89862 0.00049584 551.78006409738 555.787111327128 48.533 0.70385 48.533 48.273 48.977 3.8147E-06 244 52 7 0 0 0 8.6214E-07 2 27196 137.13 114.09 1 0.70254 0.82488 0 345600000 208690000 136910000 26792 121 10098 10380 41961;41962 41962 NPDTQWITK 9 1 0 Unmodified _NPDTQWITK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.7813 2 551.780013 1101.54547 82151.98 0.4691 0.00025884 0.225 0.00012415 0.6941 0.00038299 551.780040653459 555.787129278729 57.292 0.8633 57.292 56.968 57.831 3.8147E-06 314 63 8 0 0 0 0.0040455 2 28889 70.256 60.025 1 0.83785 0.67118 0 20902000 12305000 8596800 26793 121 10098 10380 41963;41964 41963 NPDTQWITK 9 1 0 Unmodified _NPDTQWITK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.7871 2 551.780013 1101.54547 81887.84 0.56429 0.00031136 -0.14439 -7.9672E-05 0.4199 0.00023169 551.779869034116 555.786931864906 57.717 0.84835 57.717 57.367 58.215 3.8147E-06 297 60 7 0 0 0 0.015205 2 28560 54.982 45.394 1 0.79722 0.64035 0 17482000 9579400 7902700 26794 121 10098 10380 41965;41966 41966 NPELPNAAQAQK 12 1 0 Unmodified _NPELPNAAQAQK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8406 2 640.833308 1279.65206 76291.39 0.56652 0.00036304 -0.025689 -1.6462E-05 0.54083 0.00034658 640.83318283372 644.840368397617 34.301 0.98685 34.301 33.804 34.791 3.8147E-06 406 86 8 0 0 0 5.2144E-08 2 16910 113.66 113.66 1 2.5629 2.9077 0 159180000 46962000 112220000 26795 1391 10099 10381 41967;41968 41967 NPELPNAAQAQK 12 1 0 Unmodified _NPELPNAAQAQK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.8396 2 640.833308 1279.65206 76676.8 0.55478 0.00035552 -0.11503 -7.3717E-05 0.43975 0.0002818 640.833183617194 644.840265630464 33.584 0.64579 33.584 33.279 33.925 0 306 53 9 0 0 0 1.0817E-22 2 16719 155.84 155.84 1 2.5528 2.9624 0 222220000 58094000 164120000 26796 1391 10099 10381 41969;41970 41969 NPELPNAAQAQK 12 1 0 Unmodified _NPELPNAAQAQK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.8408 2 640.833308 1279.65206 76011.02 0.41198 0.00026401 0.2116 0.0001356 0.62359 0.00039961 640.833405039834 644.840474795905 39.154 1.1056 39.154 38.806 39.912 0 406 89 9 0 0 0 9.2318E-18 2 17745 140.75 129.92 1 5.2985 4.4133 0 47877000 7284300 40593000 26797 1391 10099 10381 41971;41972 41971 NPELPNAAQAQK 12 1 0 Unmodified _NPELPNAAQAQK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.8405 2 640.833308 1279.65206 75443.51 0.35708 0.00022883 0.11294 7.2375E-05 0.47002 0.0003012 640.833433040224 644.840424540232 39.329 1.093 39.329 39.018 40.111 0 364 85 9 0 0 0 1.0929E-29 2 17349 172.59 166.29 1 5.3017 4.4395 0 45899000 7133100 38766000 26798 1391 10099 10381 41973;41974 41973 NPELSTQLIDIIHTAAAR 18 0 1 Unmodified _NPELSTQLIDIIHTAAAR_ 0 0 0 A0A024R169;Q9NXF1;B4DQR0 A0A024R169 A0A024R169 TEX10 Testis-expressed sequence 10 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.6953 3 655.02509 1962.05344 76964.22 1.1294 0.00073981 -0.14941 -9.7869E-05 0.98002 0.00064194 655.359561300477 658.361276050574 117.69 0.37641 117.69 117.48 117.86 0 80 24 5 0 0 0 1.4739E-05 1 77240 58.693 58.693 1 1.0993 1.1 0 6875800 3669900 3205900 26799 72 10100 10382 41975 41975 NPEQVDLYQFMAK 13 1 0 Oxidation (M) _NPEQVDLYQFM(ox)AK_ NPEQVDLYQFM(1)AK NPEQVDLYQFM(104.82)AK 0 1 0 A8K492;P56192;B4DF61 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.889 2 799.879598 1597.74464 70037.19 1.0637 0.00085082 0.036634 2.9303E-05 1.1003 0.00088012 800.381992986824 803.886819497062 82.496 0.47566 82.496 82.286 82.761 0 121 39 5 0 0 0 3.0207E-06 1 49227 104.82 92.661 1 2.4478 2.4057 0 20141000 8444800 11696000 26800 732 10101 10383 41976 41976 568 NPEQVDLYQFMAK 13 1 0 Oxidation (M) _NPEQVDLYQFM(ox)AK_ NPEQVDLYQFM(1)AK NPEQVDLYQFM(131.82)AK 0 1 0 A8K492;P56192;B4DF61 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.888 2 799.879598 1597.74464 67637.16 1.027 0.00082149 -0.11185 -8.9469E-05 0.91516 0.00073202 800.380430679828 803.886942935295 81.47 0.52787 81.47 81.272 81.8 0 133 44 5 0 0 0 6.9492E-14 1 49708 131.82 125.58 1 3.3704 3.6323 0 21711000 6016400 15694000 26801 732 10101 10383 41977 41977 568 NPESPFMFSLHLNEAR 16 0 1 Oxidation (M) _NPESPFM(ox)FSLHLNEAR_ NPESPFM(1)FSLHLNEAR NPESPFM(72.43)FSLHLNEAR 0 1 0 Q9HBM1 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.3087 3 635.636837 1903.88868 78460.48 0.66249 0.0004211 -0.17494 -0.0001112 0.48756 0.00030991 635.636879840172 638.973027370079 99.624 0.62856 99.624 99.367 99.996 0 197 48 6 0 0 0 3.9363E-05 1 62425 72.433 72.433 1 1.0553 1.0598 0 11182000 5462200 5719500 26802 2050 10102 10384 41978 41978 1884 NPFDTFFGQR 10 0 1 Unmodified _NPFDTFFGQR_ 0 0 0 Q6FI51;Q6FHS4;P25685;M0R080;M0QYT3;M0QXK0;M0R128;A0A1B0GX60;M0R1D6;M0QZD0 Q6FI51 Q6FI51 DNAJB1 DnaJ homolog subfamily B member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.7906 2 614.790912 1227.56727 83391.34 0.64724 0.00039792 0.15082 9.2721E-05 0.79806 0.00049064 614.791051162896 619.795119196119 105.28 0.69092 105.28 104.94 105.64 7.6294E-06 134 53 4 0 0 0 0.019834 2 65174 46.891 39.996 1 1.588 1.6243 0 6660000 2463800 4196200 26803 1517 10103 10385 41979;41980 41979 NPFGNAGLLLGEAGK 15 1 0 Unmodified _NPFGNAGLLLGEAGK_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;G3V1M7 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.3894 2 729.39099 1456.76743 70028.79 0.79715 0.00058144 0.892 0.00065062 1.6892 0.0012321 729.893691594448 733.899151285699 106.05 0.54441 106.05 105.79 106.34 0 164 38 6 0 0 0 0.00022565 1 65725 72.496 72.496 1 0.82609 0.80986 0 20708000 11032000 9675900 26804 965 10104 10386 41981 41981 NPFGNAGLLLGEAGK 15 1 0 Unmodified _NPFGNAGLLLGEAGK_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;G3V1M7 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.3914 2 729.39099 1456.76743 69656.19 0.80905 0.00059011 0.8793 0.00064135 1.6883 0.0012315 729.89363985517 733.398944874879 105.31 0.55885 105.31 105.07 105.63 0 169 38 7 0 0 0 4.9248E-07 1 66886 102.62 94.316 1 1.1236 1.1822 0 35076000 16405000 18670000 26805 965 10104 10386 41982 41982 NPFGNAGLLLGEAGK 15 1 0 Unmodified _NPFGNAGLLLGEAGK_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;G3V1M7 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.3988 2 729.39099 1456.76743 73097.59 0.83278 0.00060742 0.65583 0.00047836 1.4886 0.0010858 729.391603106922 733.398011428699 117.64 0.79635 117.64 117.39 118.19 0 132 34 7 0 0 0 0.00022171 2 69318 71.548 71.548 1 0.58486 0.46301 0 6256800 3969800 2287000 26806 965 10104 10386 41983;41984 41984 NPFGNAGLLLGEAGK 15 1 0 Unmodified _NPFGNAGLLLGEAGK_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;G3V1M7 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.3916 2 729.39099 1456.76743 72782.09 0.60654 0.00044241 0.40607 0.00029619 1.0126 0.0007386 729.391172518385 733.39789581064 117.43 0.48596 117.43 117.19 117.67 0 112 22 7 0 0 0 0.0026925 2 68207 44.193 40.306 1 0.51209 0.41787 0 6237400 3903400 2334000 26807 965 10104 10386 41985;41986 41985 NPIMSQCFDR 10 0 1 Oxidation (M) _NPIM(ox)SQCFDR_ NPIM(1)SQCFDR NPIM(51.27)SQCFDR 0 1 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.2842 2 642.278997 1282.54344 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.386 1 38.386 37.886 38.886 0 0 0 0 0.012715 1 19701 51.268 37.265 1 26808 1088;1189 10105 10387 41987 41987 834 NPIMSQCFDR 10 0 1 Oxidation (M) _NPIM(ox)SQCFDR_ NPIM(1)SQCFDR NPIM(53.33)SQCFDR 0 1 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.284 2 642.278997 1282.54344 79678.68 0.56203 0.00036098 0.33203 0.00021325 0.89406 0.00057423 642.279270339984 647.283421061552 37.341 0.33796 37.341 37.183 37.521 0 71 28 4 0 0 0 0.0050666 1 19338 53.327 44.795 1 1.6549 1.6526 0 9007700 1858200 7149500 26809 1088;1189 10105 10387 41988 41988 834 NPLFCGAENTSLWELK 16 1 0 Unmodified _NPLFCGAENTSLWELK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.9628 2 939.956368 1877.89818 64704.46 0.75152 0.0007064 -0.03568 -3.3538E-05 0.71584 0.00067286 940.457314721773 943.963598665669 115.03 0.43575 115.03 114.87 115.3 0 76 27 4 0 0 0 0.00015184 2 73194 64.439 59.054 1 0.82196 0.83468 0 6198100 3342500 2855500 26810 836;1683 10106 10388 41989;41990 41990 NPLFCGAENTSLWELK 16 1 0 Unmodified _NPLFCGAENTSLWELK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.9628 2 939.956368 1877.89818 63872.79 0.75382 0.00070856 0.23723 0.00022299 0.99105 0.00093154 940.458277494287 943.963689778889 114.54 0.39839 114.54 114.3 114.7 0 78 25 5 0 0 0 0.00015532 2 74494 72.29 67.775 1 0.88003 0.89011 0 8925500 5520200 3405300 26811 836;1683 10106 10388 41991;41992 41992 NPLFCGAENTSLWELK 16 1 0 Unmodified _NPLFCGAENTSLWELK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 944.4654 2 939.956368 1877.89818 61982.01 0.85568 0.0008043 -0.32843 -0.00030871 0.52725 0.00049559 940.45730265552 944.465041910629 126.5 0.54703 126.5 126.18 126.72 7.6294E-06 87 18 8 0 0 0 7.4776E-05 2 76094 81.565 76.072 1 1.192 0.94424 0 4900200 2096300 2803900 26812 836;1683 10106 10388 41993;41994 41993 NPLFCGAENTSLWELK 16 1 0 Unmodified _NPLFCGAENTSLWELK_ 0 0 0 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 943.9638 2 939.956368 1877.89818 62563.46 0.65893 0.00061936 -0.13678 -0.00012857 0.52215 0.0004908 940.457844224212 944.464802266218 126.32 0.42992 126.32 126.1 126.53 -7.6294E-06 110 18 9 0 0 0 0.00015154 2 75048 63.76 63.76 1 1.0918 0.8943 0 5408200 2705800 2702400 26813 836;1683 10106 10388 41995;41996 41996 NPLIINSIIDK 11 1 0 Unmodified _NPLIINSIIDK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2;D6RCL3 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.3692 2 620.368995 1238.72344 NaN NaN NaN -0.014675 -9.1041E-06 NaN NaN NaN NaN 103.51 0.66997 103.51 103.11 103.78 0 0 0 0 4.0226E-05 1 63695 100.48 80.69 1 NaN NaN 0 19859000 19859000 0 26814 786 10107 10389 41997 41997 NPLIINSIIDK 11 1 0 Unmodified _NPLIINSIIDK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2;D6RCL3 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.3696 2 620.368995 1238.72344 NaN NaN NaN 0.051353 3.1858E-05 NaN NaN NaN NaN 102.71 0.6469 102.71 102.3 102.95 0 0 0 0 4.7522E-05 1 64760 99.53 80.259 1 NaN NaN 0 29964000 29964000 0 26815 786 10107 10389 41998 41998 NPLIINSIIDK 11 1 0 Unmodified _NPLIINSIIDK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2;D6RCL3 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.3691 2 620.368995 1238.72344 NaN NaN NaN 0.085773 5.3211E-05 NaN NaN NaN NaN 115.43 0.63342 115.43 115.16 115.8 -7.6294E-06 0 0 0 0.032302 1 67564 49.5 38.349 1 NaN NaN 0 3436500 3436500 0 26816 786 10107 10389 41999 41999 NPLIINSIIDK 11 1 0 Unmodified _NPLIINSIIDK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2;D6RCL3 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.3691 2 620.368995 1238.72344 NaN NaN NaN 0.358 0.00022209 NaN NaN NaN NaN 115.22 0.55835 115.22 114.99 115.55 -7.6294E-06 0 0 0 0.034871 1 66463 48.741 22.227 1 NaN NaN 0 4431100 4431100 0 26817 786 10107 10389 42000 42000 NPLPPSVGVVDK 12 1 0 Unmodified _NPLPPSVGVVDK_ 0 0 0 Q63HR1;Q5VU21;D3DQ69;Q8NC51;D3DQ70 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.3447 2 611.34552 1220.67649 78241.95 0.41093 0.00025122 -0.67249 -0.00041113 -0.26156 -0.00015991 611.345343003522 615.352605965498 69.318 1.2501 69.318 68.726 69.976 7.6294E-06 373 109 6 0 0 0 0.032304 2 40369 35.541 34.532 1 2.0049 1.9641 0 21694000 7070300 14623000 26818 1832 10108 10390 42001;42002 42001 NPLPPSVGVVDK 12 1 0 Unmodified _NPLPPSVGVVDK_ 0 0 0 Q63HR1;Q5VU21;D3DQ69;Q8NC51;D3DQ70 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3459 2 611.34552 1220.67649 79027.48 0.45338 0.00027717 -0.043911 -2.6845E-05 0.40947 0.00025033 611.34557011564 615.352892978794 68.275 1.2244 68.275 67.523 68.748 0 398 102 6 0 0 0 0.014189 1 40528 43.77 39.354 1 2.249 2.2642 0 27738000 9894100 17844000 26819 1832 10108 10390 42003 42003 NPLVAVYYTNR 11 0 1 Unmodified _NPLVAVYYTNR_ 0 0 0 Q9UNE7 Q9UNE7 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8497 2 655.348594 1308.68264 NaN NaN NaN -1.2535 -0.00082149 NaN NaN NaN NaN 78.465 0.34088 78.465 78.248 78.589 0 0 0 0 0.018157 1 46474 53.683 33.896 1 NaN NaN 0 4057200 4057200 0 26820 2115 10109 10391 42004 42004 NPLVAVYYTNR 11 0 1 Unmodified _NPLVAVYYTNR_ 0 0 0 Q9UNE7 Q9UNE7 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3542 2 655.348594 1308.68264 NaN NaN NaN 0.14532 9.5233E-05 NaN NaN NaN NaN 77.246 0.38558 77.246 77.106 77.492 0 0 0 0 2.7676E-08 1 46714 114.5 91.068 1 NaN NaN 0 8126000 0 8126000 26821 2115 10109 10391 42005 42005 NPNGPYPYTLK 11 1 0 Unmodified _NPNGPYPYTLK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.3224 2 632.322045 1262.62954 75222.55 0.65045 0.00041129 0.34091 0.00021556 0.99135 0.00062685 632.322044706628 636.329506092384 56.978 0.79049 56.978 56.694 57.484 -3.8147E-06 298 64 7 0 0 0 4.2578E-06 2 32061 111.06 93.817 1 1.5469 1.6707 0 36837000 12556000 24281000 26822 865 10110 10392 42006;42007 42006 NPNGPYPYTLK 11 1 0 Unmodified _NPNGPYPYTLK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.3242 2 632.322045 1262.62954 75757.89 0.4542 0.0002872 0.50762 0.00032098 0.96182 0.00060818 632.322275686439 636.329520521491 56.043 0.86694 56.043 55.632 56.499 0 292 67 6 0 0 0 4.3615E-10 3 32135 131.12 116.45 1 1.5729 1.7314 0 42807000 18010000 24797000 26823 865 10110 10392 42008;42009;42010 42008 NPNGPYPYTLK 11 1 0 Unmodified _NPNGPYPYTLK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3224 2 632.322045 1262.62954 77892.24 0.63069 0.0003988 -0.094443 -5.9718E-05 0.53624 0.00033908 632.322049984684 636.32937826249 66.412 0.864 66.412 65.958 66.822 0 183 49 6 0 0 0 0.029801 1 34379 39.001 39.001 1 0.83863 0.65599 0 3230100 1678800 1551300 26824 865 10110 10392 42011 42011 NPNGPYPYTLK 11 1 0 Unmodified _NPNGPYPYTLK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.3221 2 632.322045 1262.62954 76657.59 0.51498 0.00032564 0.023656 1.4958E-05 0.53864 0.00034059 632.32189584921 636.329540308457 66.831 0.81266 66.831 66.475 67.287 0 181 47 6 0 0 0 0.023921 1 33943 42.001 30.046 1 0.92293 0.72538 0 3287800 1881900 1405800 26825 865 10110 10392 42012 42012 NPPGFAFVEFEDPR 14 0 1 Unmodified _NPPGFAFVEFEDPR_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;B2R6F3;P84103;A0A087X2D0 Q16629;B2R6F3 Q16629 SRSF7;SFRS3;SRSF3 Serine/arginine-rich splicing factor 7;Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.3867 2 811.385905 1620.75726 66090.41 0.81865 0.00066424 -0.11077 -8.9877E-05 0.70788 0.00057437 811.385738923059 816.390044754172 113.17 1.0252 113.17 112.76 113.79 0 508 74 10 0 0 0 0.00012135 2 71372 81.625 64.993 1 1.3351 1.5624 0 208070000 88190000 119880000 26826 1772;841 10111 10393 42013;42014 42014 NPPGFAFVEFEDPR 14 0 1 Unmodified _NPPGFAFVEFEDPR_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;B2R6F3;P84103;A0A087X2D0 Q16629;B2R6F3 Q16629 SRSF7;SFRS3;SRSF3 Serine/arginine-rich splicing factor 7;Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.8864 2 811.385905 1620.75726 70505.42 0.74684 0.00060598 -0.16084 -0.0001305 0.58601 0.00047548 811.887237805803 816.390277073342 116.18 0.57722 116.18 115.9 116.48 0 145 36 6 0 0 0 0.00015258 1 74113 76.332 63.755 1 1.4338 1.4733 0 10139000 3855100 6283600 26827 1772;841 10111 10393 42015 42015 NPPGFAFVEFEDPR 14 0 1 Unmodified _NPPGFAFVEFEDPR_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;B2R6F3;P84103;A0A087X2D0 Q16629;B2R6F3 Q16629 SRSF7;SFRS3;SRSF3 Serine/arginine-rich splicing factor 7;Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.8878 2 811.385905 1620.75726 66323.63 0.72593 0.00058901 0.020148 1.6348E-05 0.74608 0.00060536 811.386025316425 816.390098536379 112.58 1.0219 112.58 112.19 113.21 0 481 71 10 0 0 0 3.8972E-05 2 72701 94.767 75.524 1 1.3542 1.565 0 256380000 109950000 146430000 26828 1772;841 10111 10393 42016;42017 42017 NPPGFAFVEFEDPR 14 0 1 Unmodified _NPPGFAFVEFEDPR_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;B2R6F3;P84103;A0A087X2D0 Q16629;B2R6F3 Q16629 SRSF7;SFRS3;SRSF3 Serine/arginine-rich splicing factor 7;Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.3893 2 811.385905 1620.75726 69462.66 0.88851 0.00072092 0.019227 1.56E-05 0.90773 0.00073652 811.887100022288 816.891762817436 115.64 0.55173 115.64 115.35 115.9 0 121 35 5 0 0 0 0.0077169 2 75373 39.918 27.342 1 1.2739 1.2741 0 11449000 3861500 7587600 26829 1772;841 10111 10393 42018;42019 42018 NPPGFAFVEFEDPR 14 0 1 Unmodified _NPPGFAFVEFEDPR_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;B2R6F3;P84103;A0A087X2D0 Q16629;B2R6F3 Q16629 SRSF7;SFRS3;SRSF3 Serine/arginine-rich splicing factor 7;Serine/arginine-rich splicing factor 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.3868 2 811.385905 1620.75726 NaN NaN NaN -0.11532 -9.3573E-05 NaN NaN NaN NaN 124.2 0.93153 124.2 123.9 124.84 0 0 0 0 0.00012652 1 74260 88.187 71.555 1 NaN NaN 0 16900000 16900000 0 26830 1772;841 10111 10393 42020 42020 NPPGFAFVEFEDPR 14 0 1 Unmodified _NPPGFAFVEFEDPR_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;B2R6F3;P84103;A0A087X2D0 Q16629;B2R6F3 Q16629 SRSF7;SFRS3;SRSF3 Serine/arginine-rich splicing factor 7;Serine/arginine-rich splicing factor 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.8886 2 811.385905 1620.75726 NaN NaN NaN -0.51144 -0.00041497 NaN NaN NaN NaN 124.02 0.89742 124.02 123.71 124.61 7.6294E-06 0 0 0 0.00091135 1 73210 75.479 56.236 1 NaN NaN 0 20963000 20963000 0 26831 1772;841 10111 10393 42021 42021 NPPGFAFVEFEDPRDAADAVR 21 0 2 Unmodified _NPPGFAFVEFEDPRDAADAVR_ 0 0 1 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.7061 3 774.037946 2319.09201 68912.89 1.0132 0.00078427 -0.10671 -8.2598E-05 0.90651 0.00070168 774.37161945202 781.044300176447 111.93 1.0024 111.93 111.62 112.62 0 372 71 10 0 0 0 2.0747E-05 2 70406 43.116 41.988 1 1.2639 1.3749 0 57562000 25449000 32113000 26832 841 10112 10394 42022;42023 42022 NPPGFAFVEFEDPRDAADAVR 21 0 2 Unmodified _NPPGFAFVEFEDPRDAADAVR_ 0 0 1 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.7108 3 774.037946 2319.09201 68784.38 0.72383 0.00056027 -0.19004 -0.0001471 0.53379 0.00041317 774.371882449622 780.71017653378 111.34 0.67863 111.34 111.04 111.72 0 316 45 10 0 0 0 2.9354E-11 3 71816 90.316 85.878 1 1.299 1.502 0 71050000 29898000 41152000 26833 841 10112 10394 42024;42025;42026 42025 NPPGFAFVEFEDPRDAADAVR 21 0 2 Unmodified _NPPGFAFVEFEDPRDAADAVR_ 0 0 1 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.7047 3 774.037946 2319.09201 68732.96 0.97673 0.00075603 -0.03873 -2.9978E-05 0.938 0.00072605 774.372073463581 780.710383531872 122.42 0.72176 122.42 122.18 122.91 0 268 35 11 0 0 0 4.2269E-05 2 72929 35.834 35.834 1 0.62596 0.50064 0 81330000 51138000 30192000 26834 841 10112 10394 42027;42028 42027 NPPGFAFVEFEDPRDAADAVR 21 0 2 Unmodified _NPPGFAFVEFEDPRDAADAVR_ 0 0 1 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 774.372 3 774.037946 2319.09201 69005.18 1.0122 0.00078351 -0.097903 -7.5781E-05 0.91433 0.00070773 774.372040845003 780.710299536638 122.23 0.73254 122.23 122.01 122.74 7.6294E-06 274 36 11 0 0 0 0.0012991 2 71876 24.227 24.227 1 0.58575 0.55116 0 60791000 38563000 22229000 26835 841 10112 10394 42029;42030 42029 NPPGFAFVEFEDPRDAEDAVR 21 0 2 Unmodified _NPPGFAFVEFEDPRDAEDAVR_ 0 0 1 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2 Q16629 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.7157 3 793.373106 2377.09749 67749.4 1.0047 0.00079712 0.062972 4.9961E-05 1.0677 0.00084708 793.70753706747 800.379412639601 110.98 0.93919 110.98 110.65 111.59 7.6294E-06 524 63 12 0 0 0 7.7561E-09 2 69614 80.303 80.303 1 1.214 1.3268 0 261570000 133010000 128560000 26836 1772 10113 10395 42031;42032 42031 NPPGFAFVEFEDPRDAEDAVR 21 0 2 Unmodified _NPPGFAFVEFEDPRDAEDAVR_ 0 0 1 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2 Q16629 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.7152 3 793.373106 2377.09749 67592.04 0.84612 0.00067129 0.12187 9.6691E-05 0.96799 0.00076798 793.707559270167 800.379541232032 110.35 0.9328 110.35 110 110.93 0 559 65 13 0 0 0 4.9043E-08 1 70847 67.251 67.251 1 1.197 1.4346 0 288310000 132710000 155600000 26837 1772 10113 10395 42033 42033 NPPGFAFVEFEDPRDAEDAVR 21 0 2 Unmodified _NPPGFAFVEFEDPRDAEDAVR_ 0 0 1 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2 Q16629 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.7073 3 793.373106 2377.09749 67256.19 0.85329 0.00067698 -0.082617 -6.5546E-05 0.77067 0.00061143 793.707335792178 800.379515933975 121.53 0.79214 121.53 121.23 122.02 7.6294E-06 320 38 13 0 0 0 4.1564E-07 2 72218 54.834 54.834 1 0.8898 0.70846 0 96736000 53140000 43596000 26838 1772 10113 10395 42034;42035 42034 NPPGFAFVEFEDPRDAEDAVR 21 0 2 Unmodified _NPPGFAFVEFEDPRDAEDAVR_ 0 0 1 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2 Q16629 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.3723 3 793.373106 2377.09749 67721.17 0.85548 0.00067872 -0.16094 -0.00012769 0.69454 0.00055103 793.707232686397 800.37950914185 121.29 0.91293 121.29 121.03 121.94 0 320 45 12 0 0 0 3.6835E-05 2 71158 40.381 40.381 1 0.8973 0.84983 0 92863000 49670000 43193000 26839 1772 10113 10395 42036;42037 42037 NPPGYLEDSFVK 12 1 0 Unmodified _NPPGYLEDSFVK_ 0 0 0 A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;A0A1B0GVN4;A0A1B0GTC1;A0A1B0GWB8 A0A1B0GW37 A0A1B0GW37 NFIB Nuclear factor 1;Nuclear factor 1 B-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 683.8401 2 683.337892 1364.66123 73881.05 0.61955 0.00042336 -0.63255 -0.00043225 -0.013002 -8.8845E-06 683.337158197115 687.344532593411 93.164 0.48293 93.164 92.944 93.427 0 89 30 5 0 0 0 0.020754 1 52013 39.148 34.849 1 0.89842 0.74164 0 2345000 1252800 1092200 26840 473 10114 10396 42038 42038 NPPNQSSNERPPSLLVIETK 20 1 1 Unmodified _NPPNQSSNERPPSLLVIETK_ 0 0 1 O15042;E7ET15;B4DK81;E7EW00;H0Y8D9 O15042 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.4037 3 740.72548 2219.15461 70838.82 0.45161 0.00033452 0.3551 0.00026303 0.8067 0.00059754 741.059661038722 746.733036877027 77.307 0.53018 77.307 77.047 77.577 0 173 44 6 0 0 0 0.009456 1 45627 23.172 23.172 1 1.9204 2.0548 0 13262000 4368600 8893800 26841 1374 10115 10397 42039 42039 NPPNQSSNERPPSLLVIETK 20 1 1 Unmodified _NPPNQSSNERPPSLLVIETK_ 0 0 1 O15042;E7ET15;B4DK81;E7EW00;H0Y8D9 O15042 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.0669 3 740.72548 2219.15461 71415.04 0.42267 0.00031308 0.31297 0.00023183 0.73564 0.00054491 740.725379295385 747.067456307756 76.166 0.38182 76.166 75.978 76.359 0 182 34 7 0 0 0 5.509E-05 1 45902 42.716 42.716 1 2.1225 2.4192 0 19886000 7006500 12880000 26842 1374 10115 10397 42040 42040 NPPPPINFQEWDGLVR 16 0 1 Unmodified _NPPPPINFQEWDGLVR_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 944.983 2 939.978493 1877.94243 59692.54 1.0718 0.0010075 0.45555 0.00042821 1.5274 0.0014357 939.977546135858 944.982708321097 119.04 0.69754 119.04 118.57 119.26 -7.6294E-06 133 40 7 0 0 0 4.1894E-05 2 76447 84.289 84.289 1 0.81487 0.83421 0 14502000 8664900 5837400 26843 786 10116 10398 42041;42042 42042 NPPPPINFQEWDGLVR 16 0 1 Unmodified _NPPPPINFQEWDGLVR_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 940.4805 2 939.978493 1877.94243 61786.97 0.59683 0.00056101 0.22958 0.0002158 0.82641 0.00077681 940.480781970654 944.982505415924 131.29 0.71413 131.29 130.9 131.61 0 122 32 6 0 0 0 0.00038509 1 79665 66.498 66.498 1 1.4235 1.2091 0 9173700 3120300 6053300 26844 786 10116 10398 42043 42043 NPPPPINFQEWDGLVR 16 0 1 Unmodified _NPPPPINFQEWDGLVR_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 944.9841 2 939.978493 1877.94243 61449.43 0.91031 0.00085567 0.56557 0.00053162 1.4759 0.0013873 939.981401697441 945.48422272415 131.11 0.66217 131.11 130.84 131.5 0 151 30 8 0 0 0 8.7368E-05 2 78592 80.522 80.522 1 1.2534 1.0129 0 11498000 4717500 6780500 26845 786 10116 10398 42044;42045 42044 NPPRFAFVEFEDPR 14 0 2 Unmodified _NPPRFAFVEFEDPR_ 0 0 1 Q8NB80 Q8NB80 Q8NB80 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.9587 3 574.286245 1719.8369 81545.13 0.62099 0.00035663 -0.017136 -9.8409E-06 0.60385 0.00034679 574.285995993902 580.95835323799 102.06 1.0042 102.06 101.37 102.37 0 218 78 6 0 0 0 0.013421 2 64137 31.389 1.9038 1 1.0998 1.2048 0 19873000 7206600 12666000 26846 1918 10117 10399 42046;42047 42046 NPQITCTGFDRPNLYLEVR 19 0 2 Unmodified _NPQITCTGFDRPNLYLEVR_ 0 0 1 Q14191;Q59F09 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.0518 3 765.05131 2292.1321 70888.56 0.84227 0.00064438 -0.063455 -4.8546E-05 0.77882 0.00059584 765.385403477673 771.723606829163 109.18 0.36171 109.18 109.02 109.38 0 53 15 6 0 0 0 0.0027062 1 61935 30.956 30.956 1 0.98815 0.88668 0 2400400 984660 1415700 26847 1728 10118 10400 42048 42048 NPQNSTVLAR 10 0 1 Unmodified _NPQNSTVLAR_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.3002 2 550.296362 1098.57817 83146.41 0.6546 0.00036023 -0.58789 -0.00032352 0.066708 3.6709E-05 550.296054595299 555.300366494098 25.056 0.46331 25.056 24.772 25.236 0 98 23 8 0 0 0 3.4608E-22 2 10702 164.57 77.09 1 0.81505 0.87781 0 47728000 27230000 20498000 26848 1712;1225 10119 10401 42049;42050 42050 NPQNSTVLAR 10 0 1 Unmodified _NPQNSTVLAR_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.3007 2 550.296362 1098.57817 78660.63 0.63688 0.00035048 0.4014 0.00022089 1.0383 0.00057136 550.296216824761 555.300384158573 24.808 0.4223 24.808 24.616 25.038 1.9073E-06 77 18 7 0 0 0 1.1762E-23 2 10454 175.44 100.34 1 0.8263 0.95169 0 54124000 28924000 25199000 26849 1712;1225 10119 10401 42051;42052 42051 NPQNSTVLAR 10 0 1 Unmodified _NPQNSTVLAR_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.3002 2 550.296362 1098.57817 79483.27 0.39379 0.0002167 -0.23269 -0.00012805 0.1611 8.8654E-05 550.296043893965 555.300446266622 27.508 0.54045 27.508 27.161 27.702 1.9073E-06 91 23 7 0 0 0 0.00057758 1 10660 84.615 42.016 1 1.7452 1.4853 0 5407400 2011100 3396300 26850 1712;1225 10119 10401 42053 42053 NPQNSTVLAR 10 0 1 Unmodified _NPQNSTVLAR_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.3013 2 550.296362 1098.57817 82971.45 0.22985 0.00012649 -0.34069 -0.00018748 -0.11083 -6.0992E-05 550.296286123265 555.300201864494 27.484 0.68481 27.484 27.143 27.828 0 99 26 7 0 0 0 0.00097153 2 10135 78.264 45.001 1 1.909 1.637 0 4467600 1457900 3009700 26851 1712;1225 10119 10401 42054;42055 42054 NPQSYLYLVK 10 1 0 Unmodified _NPQSYLYLVK_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8428 2 612.834788 1223.65502 73970.66 0.52387 0.00032105 0.42672 0.00026151 0.9506 0.00058256 612.834740294525 616.842568157334 87.35 0.3715 87.35 87.173 87.544 0 91 35 4 0 0 0 0.0026728 1 52644 68.016 68.016 1 1.515 1.5425 0 14161000 7096400 7064200 26852 1088;1189 10120 10402 42056 42056 NPQSYLYLVK 10 1 0 Unmodified _NPQSYLYLVK_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8351 2 612.834788 1223.65502 NaN NaN NaN 0.046905 2.8745E-05 NaN NaN NaN NaN 86.328 0.35449 86.328 86.177 86.531 0 0 0 0 1.8104E-05 1 53185 104.06 86.817 1 NaN NaN 0 9692400 9692400 0 26853 1088;1189 10120 10402 42057 42057 NPQSYLYLVK 10 1 0 Unmodified _NPQSYLYLVK_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8429 2 612.834788 1223.65502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.277 1 86.277 85.777 86.777 0 0 0 0 4.5608E-06 1 53184 103.55 55.587 1 26854 1088;1189 10120 10402 42058 42058 NPQSYLYLVK 10 1 0 Unmodified _NPQSYLYLVK_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8441 2 612.834788 1223.65502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.557 1 86.557 86.057 87.057 0 0 0 0 0.0097241 1 53356 57.859 37.868 1 26855 1088;1189 10120 10402 42059 42059 NPSIAVPIVLK 11 1 0 Unmodified _NPSIAVPIVLK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.8708 2 575.863349 1149.71214 82761.37 0.68612 0.00039511 -0.13134 -7.5636E-05 0.55478 0.00031947 575.863194211213 579.870398375833 106.02 0.53986 106.02 105.75 106.29 0 138 38 6 0 0 0 0.0063655 3 65619 54.539 47.816 1 0.73187 0.73204 0 9778800 5663000 4115800 26856 1990 10121 10403 42060;42061;42062 42060 NPSIAVPIVLK 11 1 0 Unmodified _NPSIAVPIVLK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.8705 2 575.863349 1149.71214 80629.34 0.82397 0.00047449 -0.21372 -0.00012308 0.61024 0.00035142 575.863166014375 579.870236215137 105.31 0.52679 105.31 105 105.53 0 144 38 5 0 0 0 0.00046539 1 66720 90.696 82.77 1 0.70349 0.75178 0 21068000 12404000 8664200 26857 1990 10121 10403 42063 42063 NPSIAVPIVLK 11 1 0 Unmodified _NPSIAVPIVLK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.8636 2 575.863349 1149.71214 80940.4 0.67772 0.00039028 0.19995 0.00011514 0.87767 0.00050542 575.863511074136 579.870583173522 117.69 0.40831 117.69 117.49 117.9 -7.6294E-06 55 17 4 0 0 0 0.017726 2 69385 45.161 42.183 1 0.95139 0.79666 0 1642600 874710 767890 26858 1990 10121 10403 42064;42065 42065 NPSIAVPIVLK 11 1 0 Unmodified _NPSIAVPIVLK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.8633 2 575.863349 1149.71214 85629.96 0.43571 0.00025091 0.33972 0.00019563 0.77543 0.00044654 575.863139956729 579.870812161492 117.43 0.37216 117.43 117.22 117.6 -7.6294E-06 59 16 6 0 0 0 0.033049 1 68258 37.344 34.492 1 0.80021 0.66249 0 1666800 932550 734210 26859 1990 10121 10403 42066 42066 NPSSPLYTTLGVITK 15 1 0 Unmodified _NPSSPLYTTLGVITK_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.9411 2 795.940513 1589.86647 70702.79 0.91549 0.00072867 0.17607 0.00014014 1.0916 0.00086881 795.940562198642 799.947745319976 109.29 0.85588 109.29 109 109.86 7.6294E-06 311 61 8 0 0 0 1.3936E-07 1 68449 109.84 95.939 1 1.1316 1.2268 0 44565000 21453000 23113000 26860 1427 10122 10404 42067 42067 NPSSPLYTTLGVITK 15 1 0 Unmodified _NPSSPLYTTLGVITK_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.941 2 795.940513 1589.86647 70454.7 0.81193 0.00064625 0.56118 0.00044666 1.3731 0.0010929 795.940888277938 799.948027349779 108.71 0.98798 108.71 108.39 109.37 -7.6294E-06 304 68 8 0 0 0 6.0219E-07 1 69697 100.38 85.957 1 1.0145 1.1304 0 51719000 24568000 27151000 26861 1427 10122 10404 42068 42068 NPSSPLYTTLGVITK 15 1 0 Unmodified _NPSSPLYTTLGVITK_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 799.9476 2 795.940513 1589.86647 68859.38 0.6799 0.00054116 -0.00038773 -3.0861E-07 0.67951 0.00054085 796.441873088246 799.947522666003 120.67 0.60535 120.67 120.48 121.08 0 131 28 8 0 0 0 0.00018931 2 71760 77.078 68.124 1 1.223 0.9941 0 28943000 17842000 11102000 26862 1427 10122 10404 42069;42070 42070 NPSSPLYTTLGVITK 15 1 0 Unmodified _NPSSPLYTTLGVITK_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.9482 2 795.940513 1589.86647 69287.45 0.84727 0.00067438 -0.086235 -6.8638E-05 0.76103 0.00060574 796.441861081644 799.947474446241 120.45 0.50102 120.45 120.22 120.72 0 181 28 8 0 0 0 0.00022052 2 70609 64.534 56.806 1 1.2153 0.97643 0 16177000 7696500 8480100 26863 1427 10122 10404 42071;42072 42072 NPSSSVPPPSAGSVK 15 1 0 Unmodified _NPSSSVPPPSAGSVK_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.873 2 705.864805 1409.71506 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.64 1 31.64 31.14 32.14 0 0 0 0 0.0016375 1 15629 70.089 49.883 1 26864 640 10123 10405 42073 42073 NPSSSVPPPSAGSVK 15 1 0 Unmodified _NPSSSVPPPSAGSVK_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.8736 2 705.864805 1409.71506 NaN NaN NaN 0.72687 0.00051307 NaN NaN NaN NaN 31.097 0.41349 31.097 30.892 31.306 0 0 0 0 8.2097E-05 1 15335 80.014 68.421 1 NaN NaN 0 4693200 0 4693200 26865 640 10123 10405 42074 42074 NPSSSVPPPSAGSVK 15 1 0 Unmodified _NPSSSVPPPSAGSVK_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.8712 2 705.864805 1409.71506 NaN NaN NaN 0.14346 0.00010127 NaN NaN NaN NaN 36.381 0.8358 36.381 35.98 36.816 0 0 0 0 0.022113 1 16334 42.083 26.544 1 NaN NaN 0 1724200 0 1724200 26866 640 10123 10405 42075 42075 NPSTVCLCPEQPTCSNADSR 20 0 1 Unmodified _NPSTVCLCPEQPTCSNADSR_ 0 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1147.4854 2 1146.98573 2291.95691 NaN NaN NaN -0.14075 -0.00016144 NaN NaN NaN NaN 55.709 0.23479 55.709 55.606 55.841 0 0 0 0 0.021066 1 31938 33.685 28.702 1 NaN NaN 0 2745000 2745000 0 26867 2040 10124 10406 42076 42076 NPSTVCLCPEQPTCSNADSR 20 0 1 Unmodified _NPSTVCLCPEQPTCSNADSR_ 0 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1151.9912 2 1146.98573 2291.95691 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.702 1 55.702 55.202 56.202 0 0 0 0 0.013313 1 31958 42.568 38.02 1 26868 2040 10124 10406 42077 42077 NPTIVNFPITNVDLR 15 0 1 Unmodified _NPTIVNFPITNVDLR_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;B3KPG7;B3KMG1 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.9756 2 856.970136 1711.92572 66047.83 0.78475 0.00067251 0.50062 0.00042902 1.2854 0.0011015 856.970099894929 861.974541624957 117.5 0.40149 117.5 117.29 117.69 7.6294E-06 161 27 8 0 0 0 1.8189E-10 2 75184 120.57 109.67 1 0.73124 0.74146 0 28093000 16331000 11762000 26869 1119 10125 10407 42078;42079 42079 NPTIVNFPITNVDLR 15 0 1 Unmodified _NPTIVNFPITNVDLR_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;B3KPG7;B3KMG1 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.4734 2 856.970136 1711.92572 NaN NaN NaN -0.041895 -3.5903E-05 NaN NaN NaN NaN 117 0.43799 117 116.81 117.24 0 0 0 0 7.443E-23 1 76603 134.08 116.71 1 NaN NaN 0 17309000 17309000 0 26870 1119 10125 10407 42080 42080 NPTIVNFPITNVDLR 15 0 1 Unmodified _NPTIVNFPITNVDLR_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;B3KPG7;B3KMG1 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 857.4726 2 856.970136 1711.92572 65799.93 0.72372 0.00062021 0.38929 0.00033361 1.113 0.00095382 856.970087597004 861.974879882345 129.43 0.47847 129.43 129.24 129.72 0 102 21 7 0 0 0 0.00022303 2 78313 68.44 62.598 1 0.76131 0.65092 0 5858500 3568200 2290200 26871 1119 10125 10407 42081;42082 42082 NPTIVNFPITNVDLR 15 0 1 Unmodified _NPTIVNFPITNVDLR_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;B3KPG7;B3KMG1 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 862.4761 2 856.970136 1711.92572 67233.42 0.92262 0.00079066 0.15856 0.00013588 1.0812 0.00092654 856.969796177971 861.974706382491 129.27 0.50249 129.27 129.05 129.55 0 111 23 8 0 0 0 0.0002248 2 77239 71.176 65.516 1 0.6633 0.54324 0 8965200 5168600 3796600 26872 1119 10125 10407 42083;42084 42084 NPTNTVFDAK 10 1 0 Unmodified _NPTNTVFDAK_ 0 0 0 E9PN89 E9PN89 E9PN89 HSPA8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.7787 2 553.77747 1105.54039 83475.98 0.65356 0.00036193 0.024092 1.3342E-05 0.67765 0.00037527 553.777283843178 557.784510310954 39.406 0.556 39.406 39.126 39.682 0 169 45 6 0 0 0 0.039542 1 20405 38.962 20.187 1 1.3974 1.3699 0 20758000 9777100 10981000 26873 1248 10126 10408 42085 42085 NPTNTVFDAK 10 1 0 Unmodified _NPTNTVFDAK_ 0 0 0 E9PN89 E9PN89 E9PN89 HSPA8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.7769 2 553.77747 1105.54039 79986.53 0.54717 0.00030301 0.89412 0.00049514 1.4413 0.00079816 553.777088042925 557.784597342794 38.33 0.4838 38.33 38.15 38.633 0 154 40 6 0 0 0 0.028964 1 20151 43.218 27.016 1 1.3265 1.442 0 39469000 16440000 23029000 26874 1248 10126 10408 42086 42086 NPTTPSSVIFPLVK 14 1 0 Unmodified _NPTTPSSVIFPLVK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.4282 2 750.427042 1498.83953 72101.52 1.1821 0.0008871 0.17413 0.00013067 1.3563 0.0010178 750.426693407845 754.434030658654 111.51 0.40819 111.51 111.26 111.67 0 149 29 7 0 0 0 0.0015327 2 70108 53.013 53.013 1 0.63167 0.68225 0 42289000 26577000 15712000 26875 1849 10127 10409 42087;42088 42088 NPTTPSSVIFPLVK 14 1 0 Unmodified _NPTTPSSVIFPLVK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.929 2 750.427042 1498.83953 72053.16 0.55378 0.00041557 0.1894 0.00014213 0.74318 0.0005577 750.426737601108 754.434301343072 110.85 0.41782 110.85 110.59 111.01 -7.6294E-06 161 31 7 0 0 0 0.0016263 3 71335 52.344 52.344 1 0.64272 0.66451 0 24945000 16213000 8731600 26876 1849 10127 10409 42089;42090;42091 42090 NPTTPSSVIFPLVK 14 1 0 Unmodified _NPTTPSSVIFPLVK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 754.9367 2 750.427042 1498.83953 71762.06 0.99898 0.00074966 0.43978 0.00033002 1.4388 0.0010797 750.427197690178 754.434034105254 122.87 0.47638 122.87 122.63 123.11 0 123 22 8 0 0 0 3.8972E-05 2 73298 94.767 94.767 1 1.5019 1.1685 0 12448000 4915600 7532200 26877 1849 10127 10409 42092;42093 42092 NPTTPSSVIFPLVK 14 1 0 Unmodified _NPTTPSSVIFPLVK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.4355 2 750.427042 1498.83953 73290.94 0.82945 0.00062244 0.38875 0.00029173 1.2182 0.00091417 750.426589714124 754.434094812074 122.67 0.72916 122.67 122.17 122.9 0 140 36 8 0 0 0 0.00018721 2 72191 71.159 71.159 1 1.5049 1.2442 0 11851000 4752200 7099200 26878 1849 10127 10409 42094;42095 42094 NPVAPAPDPR 10 0 1 Unmodified _NPVAPAPDPR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2792 2 517.274898 1032.53524 83454.43 0.75986 0.00039306 0.04653 2.4069E-05 0.80639 0.00041713 517.274707246094 522.278982613723 28.691 0.31001 28.691 28.54 28.85 0 90 16 7 0 0 0 0.0002144 2 13593 93.598 76.212 1 1.2419 1.3505 0 50693000 21562000 29131000 26879 1412 10128 10410 42096;42097 42096 NPVAPAPDPR 10 0 1 Unmodified _NPVAPAPDPR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.2788 2 517.274898 1032.53524 84139.46 0.33647 0.00017405 0.21844 0.00011299 0.5549 0.00028704 517.274820454526 522.278998185818 28.046 0.33687 28.046 27.835 28.172 -1.9073E-06 97 19 6 0 0 0 0.00013082 2 13217 96.331 76.628 1 1.1753 1.361 0 67112000 30191000 36920000 26880 1412 10128 10410 42098;42099 42098 NPVHCFDLASLDPR 14 0 1 Unmodified _NPVHCFDLASLDPR_ 0 0 0 O43159 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.6008 3 547.599835 1639.77767 82827.51 0.32193 0.00017629 0.59717 0.00032701 0.91911 0.0005033 547.600139519938 550.936734616477 100.56 0.39697 100.56 100.34 100.74 0 74 29 4 0 0 0 0.011225 1 56857 22.803 18.334 1 0.71373 0.59672 0 3605900 1898700 1707200 26881 1380 10129 10411 42100 42100 NPVSDHFPVGCMK 13 1 0 Oxidation (M) _NPVSDHFPVGCM(ox)K_ NPVSDHFPVGCM(1)K NPVSDHFPVGCM(127.87)K 0 1 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.3472 2 752.339586 1502.66462 NaN NaN NaN -0.29799 -0.00022419 NaN NaN NaN NaN 44.518 0.34008 44.518 44.337 44.677 0 0 0 0 7.2881E-15 1 24261 127.87 119.63 1 NaN NaN 0 14725000 0 14725000 26882 759 10130 10412 42101 42101 587 NPVTIFSLATNEMWR 15 0 1 Oxidation (M) _NPVTIFSLATNEM(ox)WR_ NPVTIFSLATNEM(1)WR NPVTIFSLATNEM(78.69)WR 0 1 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.95 2 897.945804 1793.87705 NaN NaN NaN 1.5031 0.0013497 NaN NaN NaN NaN 118.29 0.52057 118.29 118.09 118.61 0 0 0 0 4.5938E-05 1 77686 78.692 73.208 1 NaN NaN 0 9451300 0 9451300 26883 666 10131 10413 42102 42102 519 NPVTIFSLATNEMWR 15 0 1 Oxidation (M) _NPVTIFSLATNEM(ox)WR_ NPVTIFSLATNEM(1)WR NPVTIFSLATNEM(97.21)WR 0 1 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.9465 2 897.945804 1793.87705 NaN NaN NaN -1.779 -0.0015975 NaN NaN NaN NaN 118.26 0.23684 118.26 118.09 118.33 0 0 0 0 2.204E-07 1 77714 97.214 83.308 1 NaN NaN 0 5237200 5237200 0 26884 666 10131 10413 42103 42103 519 NQALFPACVLK 11 1 0 Unmodified _NQALFPACVLK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.8492 2 630.842091 1259.66963 77958.73 0.60312 0.00038047 -0.52108 -0.00032872 0.082037 5.1752E-05 630.84147810975 634.849121546404 97.207 0.63902 97.207 96.797 97.436 0 180 57 5 0 0 0 0.0020855 3 59251 62.546 45.77 1 1.0725 1.1214 0 11942000 6545200 5396800 26885 452 10132 10414 42104;42105;42106 42105 NQALFPACVLK 11 1 0 Unmodified _NQALFPACVLK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8422 2 630.842091 1259.66963 78672.58 0.67435 0.00042541 -0.2482 -0.00015657 0.42616 0.00026884 630.841525500603 634.8492092633 96.246 0.70446 96.246 95.901 96.606 0 162 61 4 0 0 0 0.0088595 1 60047 50.04 37.413 1 1.2195 1.2693 0 19027000 8203400 10824000 26886 452 10132 10414 42107 42107 NQALFPACVLK 11 1 0 Unmodified _NQALFPACVLK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.849 2 630.842091 1259.66963 77684.7 0.68436 0.00043172 -0.21225 -0.00013389 0.47211 0.00029783 630.841826313995 634.848997193629 110.27 0.52518 110.27 109.99 110.51 0 127 28 7 0 0 0 0.011607 1 63594 48.283 32.621 1 1.3772 1.0693 0 3567400 1235900 2331500 26887 452 10132 10414 42108 42108 NQALFPACVLK 11 1 0 Unmodified _NQALFPACVLK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.849 2 630.842091 1259.66963 78548.22 0.80159 0.00050567 -0.54835 -0.00034592 0.25324 0.00015975 630.841567687101 634.848537369319 109.98 0.48332 109.98 109.79 110.27 0 118 25 6 0 0 0 0.012508 3 62525 47.823 35.296 1 1.5217 1.1862 0 3613100 1017000 2596100 26888 452 10132 10414 42109;42110;42111 42110 NQALNIAWQK 10 1 0 Unmodified _NQALNIAWQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.3289 2 593.32238 1184.63021 78884.77 0.27992 0.00016608 -0.52621 -0.00031221 -0.24629 -0.00014613 593.321836770497 597.329293005802 69.951 0.53384 69.951 69.609 70.143 0 282 48 8 0 0 0 1.5728E-08 2 40620 122.74 101.29 1 0.78779 0.89165 0 152240000 86055000 66190000 26889 69 10133 10415 42112;42113 42112 NQALNIAWQK 10 1 0 Unmodified _NQALNIAWQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.33 2 593.32238 1184.63021 78756.93 0.43529 0.00025827 -0.78908 -0.00046818 -0.35379 -0.00020991 593.321792113878 597.32925307096 68.704 0.44754 68.704 68.444 68.892 0 220 39 8 0 0 0 4.4057E-12 2 40777 145.34 119.78 1 0.78511 0.91052 0 218430000 127430000 90998000 26890 69 10133 10415 42114;42115 42114 NQALNIAWQK 10 1 0 Unmodified _NQALNIAWQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.3301 2 593.32238 1184.63021 79073.74 0.38301 0.00022725 0.37672 0.00022352 0.75973 0.00045076 593.322700517715 597.329879099304 80.023 0.81435 80.023 79.686 80.5 0 257 53 8 0 0 0 0.0020368 2 43150 77.072 77.072 1 1.6747 1.3767 0 38815000 14476000 24338000 26891 69 10133 10415 42116;42117 42116 NQALNIAWQK 10 1 0 Unmodified _NQALNIAWQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.3228 2 593.32238 1184.63021 79493.2 0.50459 0.00029938 -0.1222 -7.2502E-05 0.38239 0.00022688 593.322531056479 597.329626663045 80.246 0.80448 80.246 79.899 80.704 0 234 50 8 0 0 0 4.1608E-08 2 42436 143.89 129.68 1 1.4969 1.2364 0 31447000 12773000 18674000 26892 69 10133 10415 42118;42119 42119 NQALNTDNYGHDLASVQALQR 21 0 1 Unmodified _NQALNTDNYGHDLASVQALQR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.0513 3 776.715755 2327.12543 69395.61 0.78041 0.00060615 -0.19601 -0.00015225 0.58439 0.00045391 777.049785242398 780.385660288221 80.034 0.47275 80.034 79.76 80.233 0 197 39 7 0 0 0 1.9824E-08 3 47540 71.376 71.376 1 1.4392 1.4846 0 24201000 10419000 13782000 26893 523 10134 10416 42120;42121;42122 42121 NQALNTDNYGHDLASVQALQR 21 0 1 Unmodified _NQALNTDNYGHDLASVQALQR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.0521 3 776.715755 2327.12543 68500.24 0.82378 0.00063985 -0.50319 -0.00039083 0.32059 0.00024901 777.049976139304 780.384967885916 78.929 0.53499 78.929 78.674 79.209 0 264 45 8 0 0 0 6.1133E-16 4 47866 104.86 104.86 1 1.3943 1.5106 0 27530000 10674000 16856000 26894 523 10134 10416 42123;42124;42125;42126 42123 NQALNTDNYGHDLASVQALQR 21 0 1 Unmodified _NQALNTDNYGHDLASVQALQR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.3851 3 776.715755 2327.12543 69900.1 0.72232 0.00056104 -0.53807 -0.00041793 0.18425 0.00014311 777.049701513951 780.385821171169 92.21 0.46622 92.21 92.002 92.468 0 144 25 8 0 0 0 1.9417E-07 3 51262 57.496 57.496 1 3.0162 2.5964 0 7288600 1801400 5487200 26895 523 10134 10416 42127;42128;42129 42127 NQALNTDNYGHDLASVQALQR 21 0 1 Unmodified _NQALNTDNYGHDLASVQALQR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 777.0513 3 776.715755 2327.12543 71646.63 0.49377 0.00038352 -0.23657 -0.00018375 0.2572 0.00019977 777.050101598176 780.386175942096 92.033 0.52932 92.033 91.809 92.339 -7.6294E-06 146 28 7 0 0 0 0.026009 2 50407 17.146 17.146 1 2.9373 2.452 0 4959500 1252700 3706800 26896 523 10134 10416 42130;42131 42131 NQAPPGLYTK 10 1 0 Unmodified _NQAPPGLYTK_ 0 0 0 Q5T6L4;P00966;B4E395 Q5T6L4 Q5T6L4 ASS;ASS1 Argininosuccinate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.7985 2 544.790381 1087.56621 NaN NaN NaN 0.12816 6.9823E-05 NaN NaN NaN NaN 34.893 0.74017 34.893 34.463 35.203 0 0 0 0 0.0068167 1 17316 66.621 66.621 1 NaN NaN 0 8048900 0 8048900 26897 1437 10135 10417 42132 42132 NQDEESQEAPELLK 14 1 0 Unmodified _NQDEESQEAPELLK_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.3909 2 815.383756 1628.75296 NaN NaN NaN 0.0029784 2.4286E-06 NaN NaN NaN NaN 58.564 0.69421 58.564 58.159 58.853 0 0 0 0 0.0011066 1 32979 73.848 56.822 1 NaN NaN 0 18128000 0 18128000 26898 1926 10136 10418 42133 42133 NQDEESQEAPELLK 14 1 0 Unmodified _NQDEESQEAPELLK_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.3919 2 815.383756 1628.75296 NaN NaN NaN -0.023593 -1.9237E-05 NaN NaN NaN NaN 57.656 0.54801 57.656 57.327 57.875 -3.8147E-06 0 0 0 1.7103E-09 1 33214 106.49 89.466 1 NaN NaN 0 31867000 0 31867000 26899 1926 10136 10418 42134 42134 NQDEESQEAPELLK 14 1 0 Unmodified _NQDEESQEAPELLK_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.392 2 815.383756 1628.75296 67919.34 0.61265 0.00049954 0.22926 0.00018693 0.84191 0.00068648 815.383939025816 819.391039392835 67.936 0.70177 67.936 67.566 68.267 0 284 46 8 0 0 0 0.00021026 2 35340 67.879 67.879 1 0.64158 0.49739 0 13726000 8201100 5525200 26900 1926 10136 10418 42135;42136 42136 NQDEESQEAPELLK 14 1 0 Unmodified _NQDEESQEAPELLK_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 819.3912 2 815.383756 1628.75296 66925.07 0.56068 0.00045717 0.026096 2.1278E-05 0.58678 0.00047845 815.383859863378 819.39083067431 68.446 0.62578 68.446 68.15 68.776 0 282 43 9 0 0 0 6.7394E-05 2 34945 90.434 90.434 1 0.69083 0.56517 0 12596000 7416400 5179500 26901 1926 10136 10418 42137;42138 42138 NQDEQEIPFR 10 0 1 Unmodified _NQDEQEIPFR_ 0 0 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.3058 2 638.301841 1274.58913 75018.94 0.72666 0.00046383 0.088462 5.6465E-05 0.81513 0.0005203 638.301988457482 643.305924180594 65.92 0.63749 65.92 65.585 66.222 0 236 45 7 0 0 0 0.014443 1 34002 49.06 44.609 1 0.86755 0.74648 0 7547200 3967400 3579800 26902 1307 10137 10419 42139 42139 NQDEQEIPFR 10 0 1 Unmodified _NQDEQEIPFR_ 0 0 0 H6QX63;Q6PK04;I3L0U5 H6QX63 H6QX63 CCDC137 Coiled-coil domain-containing protein 137 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.3061 2 638.301841 1274.58913 76698.77 0.4904 0.00031302 0.087593 5.5911E-05 0.57799 0.00036893 638.301973486048 643.306018757733 66.416 0.6403 66.416 66.063 66.703 0 243 44 7 0 0 0 0.027928 1 33515 43.635 39.184 1 0.84271 0.70196 0 6976200 3855300 3121000 26903 1307 10137 10419 42140 42140 NQDLAPNSAEQASILSLVTK 20 1 0 Unmodified _NQDLAPNSAEQASILSLVTK_ 0 0 0 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63;X6R6Z1;A0A0A0MRL0 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1054.5601 2 1050.05258 2098.09061 57175.28 0.55089 0.00057847 -0.71457 -0.00075034 -0.16368 -0.00017187 1050.05176039241 1054.55791513893 116.3 0.51279 116.3 116.05 116.56 0 176 33 8 0 0 0 3.3061E-06 2 74209 61.649 61.649 1 1.6265 1.6572 0 28075000 10991000 17084000 26904 1049 10138 10420 42141;42142 42142 NQGGGLSSSGAGEGQGPK 18 1 0 Unmodified _NQGGGLSSSGAGEGQGPK_ 0 0 0 P07814 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.8798 2 794.371515 1586.72848 75167.27 0.53568 0.00042553 -0.25567 -0.0002031 0.28001 0.00022243 794.371330715005 798.378516934763 19.096 0.34618 19.096 18.892 19.238 0 92 25 5 0 0 0 2.9696E-05 2 5775 66.533 57.198 1 2.7002 2.732 0 6808700 1905900 4902800 26905 1454 10139 10421 42143;42144 42143 NQGGGLSSSGAGEGQGPK 18 1 0 Unmodified _NQGGGLSSSGAGEGQGPK_ 0 0 0 P07814 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.3777 2 794.371515 1586.72848 NaN NaN NaN -0.10821 -8.5962E-05 NaN NaN NaN NaN 19.149 0.1066 19.149 19.089 19.196 0 0 0 0 0.00071626 1 5640 55.314 34.013 1 NaN NaN 0 1918600 0 1918600 26906 1454 10139 10421 42145 42145 NQGGSSWEAPYSR 13 0 1 Unmodified _NQGGSSWEAPYSR_ 0 0 0 Q5BKZ1 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.8247 2 719.820929 1437.62731 72981.2 0.95265 0.00068574 0.42067 0.00030281 1.3733 0.00098854 719.821075209779 724.82518838806 45.309 0.49054 45.309 45.028 45.518 0 101 43 4 0 0 0 0.00015572 2 24269 72.652 69.396 1 1.4046 1.4207 0 17886000 9173600 8712200 26907 1804 10140 10422 42146;42147 42146 NQGGSSWEAPYSR 13 0 1 Unmodified _NQGGSSWEAPYSR_ 0 0 0 Q5BKZ1 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.8214 2 719.820929 1437.62731 72404.65 0.92017 0.00066236 -0.048033 -3.4575E-05 0.87214 0.00062778 719.82101368223 724.824939299976 44.392 0.49123 44.392 44.098 44.589 0 148 43 6 0 0 0 0.00010772 2 24191 91.937 91.109 1 0.86655 0.85835 0 15582000 9678600 5903900 26908 1804 10140 10422 42148;42149 42148 NQGGSSWEAPYSR 13 0 1 Unmodified _NQGGSSWEAPYSR_ 0 0 0 Q5BKZ1 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 719.8206 2 719.820929 1437.62731 NaN NaN NaN -0.049272 -3.5467E-05 NaN NaN NaN NaN 52.543 0.53703 52.543 52.251 52.788 0 0 0 0 0.021254 1 26005 47.288 43.401 1 NaN NaN 0 795400 795400 0 26909 1804 10140 10422 42150 42150 NQGGSSWEAPYSR 13 0 1 Unmodified _NQGGSSWEAPYSR_ 0 0 0 Q5BKZ1 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.8259 2 719.820929 1437.62731 73026.41 0.50404 0.00036282 0.1606 0.0001156 0.66464 0.00047842 719.820894832751 724.825244146673 52.995 0.55347 52.995 52.713 53.266 -3.8147E-06 123 39 4 0 0 0 0.013486 2 25681 38.238 38.238 1 1.1543 1.009 0 1827300 902880 924410 26910 1804 10140 10422 42151;42152 42152 NQGGYGGSSSSSSYGSGR 18 0 1 Unmodified _NQGGYGGSSSSSSYGSGR_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q6IPF2;H0YH80;B4E0B5;Q3MI39 F8W6I7 F8W6I7 HNRNPA1;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.8589 2 847.853686 1693.69282 65312.14 0.67751 0.00057443 -0.091099 -7.7239E-05 0.58642 0.00049719 847.853499007479 852.857788628981 17.63 0.32802 17.63 17.512 17.84 0 49 11 6 0 0 0 1.0442E-29 2 4725 138.31 137.9 1 2.573 2.656 0 23998000 7948200 16050000 26911 317 10141 10423 42153;42154 42153 NQGLFHR 7 0 1 Unmodified _NQGLFHR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.2303 2 436.230294 870.446034 92572.75 -0.30822 -0.00013446 -0.46476 -0.00020274 -0.77298 -0.0003372 436.230402920623 441.234569000823 23.361 0.53463 23.361 22.996 23.531 0 75 26 6 0 0 0 0.016896 1 9268 97.596 87.847 1 0.82895 0.82799 0 16579000 9452700 7126400 26912 2002 10142 10424 42155 42155 NQGLFHR 7 0 1 Unmodified _NQGLFHR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2343 2 436.230294 870.446034 91890.78 -0.29731 -0.0001297 0.44067 0.00019223 0.14336 6.2536E-05 436.230646682715 441.234552518537 22.827 0.45044 22.827 22.611 23.061 0 48 19 4 0 0 0 0.031504 1 8758 67.035 57.285 1 0.75119 0.74301 0 12456000 7847100 4609300 26913 2002 10142 10424 42156 42156 NQGSELSGVISSACDK 16 1 0 Unmodified _NQGSELSGVISSACDK_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.3838 2 826.383233 1650.75191 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.751 1 66.751 66.251 67.251 0 0 0 0 0.00083631 1 38537 61.375 46.403 1 26914 641 10143 10425 42157 42157 NQGSELSGVISSACDK 16 1 0 Unmodified _NQGSELSGVISSACDK_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.3912 2 826.383233 1650.75191 69859.62 0.56231 0.00046469 0.28408 0.00023476 0.84639 0.00069945 826.38358558991 830.390744818356 65.707 0.32939 65.707 65.54 65.87 0 87 27 4 0 0 0 7.6666E-07 2 38755 97.69 97.69 1 0.94114 0.94284 0 13898000 8008900 5889500 26915 641 10143 10425 42158;42159 42159 NQGSELSGVISSACDK 16 1 0 Unmodified _NQGSELSGVISSACDK_ 0 0 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 826.3838 2 826.383233 1650.75191 66970.01 0.60102 0.00049667 -0.076872 -6.3526E-05 0.52414 0.00043314 826.383191628795 830.390861980907 76.994 0.43639 76.994 76.793 77.229 0 108 27 6 0 0 0 0.010912 1 41072 33.195 33.195 1 1.1677 0.9261 0 4424800 1900200 2524600 26916 641 10143 10425 42160 42160 NQGYYDYVK 9 1 0 Unmodified _NQGYYDYVK_ 0 0 0 B4DF00;E9PDF2;E9PCR7;Q02218;B4DZ95;B4E3E9;B4DH65;E9PFG7;B4DK55;A0A0D9SFS3 B4DF00 B4DF00 OGDH 2-oxoglutarate dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.272 2 575.264196 1148.51384 81504.47 0.37775 0.00021731 -0.22289 -0.00012822 0.15486 8.9085E-05 575.264167516792 579.27093130525 45.531 0.2839 45.531 45.41 45.694 0 43 24 4 0 0 0 0.037381 1 24560 43.083 27.702 1 1.0448 1.0563 0 6872000 3358300 3513800 26917 968 10144 10426 42161 42161 NQHFEVPFIAFYR 13 0 1 Unmodified _NQHFEVPFIAFYR_ 0 0 0 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.9517 3 556.615814 1666.82561 86821.37 0.61874 0.0003444 -0.39391 -0.00021926 0.22483 0.00012515 556.950064631604 559.951599056898 124.51 0.38472 124.51 124.24 124.62 0 40 15 5 0 0 0 0.043002 1 74605 13.418 13.418 1 0.80118 0.71494 0 834650 463430 371220 26918 1870 10145 10427 42162 42162 NQIALWDQLLEGR 13 0 1 Unmodified _NQIALWDQLLEGR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.9211 2 778.414997 1554.81544 68741.74 1.072 0.00083442 -0.19583 -0.00015244 0.87612 0.00068198 778.414876559037 783.920615944557 121.63 0.83275 121.63 121.35 122.18 0 263 55 8 0 0 0 1.1371E-08 3 78628 113.69 113.69 1 0.92232 0.9435 0 34366000 18616000 15750000 26919 2080 10146 10428 42163;42164;42165 42164 NQIALWDQLLEGR 13 0 1 Unmodified _NQIALWDQLLEGR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.4194 2 778.414997 1554.81544 68964.37 0.93512 0.00072791 -0.47154 -0.00036705 0.46359 0.00036086 778.415001654989 783.419166475087 121.11 0.57888 121.11 120.82 121.4 0 228 35 9 0 0 0 3.2847E-19 3 80183 147.74 147.74 1 0.94291 1.0415 0 41760000 23564000 18195000 26920 2080 10146 10428 42166;42167;42168 42167 NQIALWDQLLEGR 13 0 1 Unmodified _NQIALWDQLLEGR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.42 2 778.414997 1554.81544 68809.01 1.1347 0.0008833 -1.0338 -0.00080469 0.10098 7.8607E-05 778.414344821658 783.418673970595 134.1 0.62897 134.1 133.72 134.35 0 130 27 9 0 0 0 3.0063E-06 2 81683 108.9 108.9 1 1.7978 1.5203 0 30516000 12759000 17756000 26921 2080 10146 10428 42169;42170 42169 NQIALWDQLLEGR 13 0 1 Unmodified _NQIALWDQLLEGR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 778.4147 2 778.414997 1554.81544 69635.41 1.1909 0.00092704 -0.20167 -0.00015698 0.98926 0.00077005 778.41512140204 783.41929712337 133.87 0.76843 133.87 133.39 134.16 1.5259E-05 187 34 10 0 0 0 0.00011507 3 80629 75.695 75.695 1 2.1865 1.9073 0 29713000 11144000 18569000 26922 2080 10146 10428 42171;42172;42173 42172 NQILNLTTDNANILLQIDNAR 21 0 1 Unmodified _NQILNLTTDNANILLQIDNAR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1184.6371 2 1184.13497 2366.25539 NaN NaN NaN 0.60283 0.00071384 NaN NaN NaN NaN 125.33 0.28505 125.33 125.14 125.42 7.6294E-06 0 0 0 2.3846E-61 1 81390 164.65 121.86 1 NaN NaN 0 136340000 136340000 0 + 26923 1161 10147 10429 42174 42174 NQILNLTTDNANILLQIDNAR 21 0 1 Unmodified _NQILNLTTDNANILLQIDNAR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1184.134 2 1184.13497 2366.25539 NaN NaN NaN 0.42973 0.00050886 NaN NaN NaN NaN 125.04 0.72461 125.04 124.74 125.47 0 0 0 0 1.434E-08 2 83106 74.678 63.239 1 NaN NaN 0 213600000 213600000 0 + 26924 1161 10147 10429 42175;42176 42175 NQILNLTTDNANILLQIDNAR 21 0 1 Unmodified _NQILNLTTDNANILLQIDNAR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1184.6362 2 1184.13497 2366.25539 NaN NaN NaN 0.050801 6.0156E-05 NaN NaN NaN NaN 134.64 0.2438 134.64 134.56 134.8 0 0 0 0 0 1 82303 310.04 268.64 1 NaN NaN 0 221400000 221400000 0 + 26925 1161 10147 10429 42177 42177 NQILNLTTDNANILLQIDNAR 21 0 1 Unmodified _NQILNLTTDNANILLQIDNAR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1184.1354 2 1184.13497 2366.25539 NaN NaN NaN 0.60175 0.00071256 NaN NaN NaN NaN 134.61 0.22928 134.61 134.53 134.76 0 0 0 0 4.0498E-51 1 81380 156.17 136.33 1 NaN NaN 0 221140000 221140000 0 + 26926 1161 10147 10429 42178 42178 NQIQDQEQLVSK 12 1 0 Unmodified _NQIQDQEQLVSK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.375 2 715.367712 1428.72087 71621.7 0.5011 0.00035847 -0.081598 -5.8373E-05 0.4195 0.0003001 715.368018493622 719.374412211007 38.835 0.53712 38.835 38.545 39.083 0 157 46 5 0 0 0 0.00022908 1 20429 84.658 73.195 1 0.98455 1.0675 0 22400000 12443000 9957100 26927 1581 10148 10430 42179 42179 NQIQDQEQLVSK 12 1 0 Unmodified _NQIQDQEQLVSK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 719.3757 2 715.367712 1428.72087 73048.3 0.55068 0.00039394 -0.25445 -0.00018202 0.29623 0.00021191 715.368212377659 719.374258485605 45.989 0.68472 45.989 45.696 46.381 3.8147E-06 169 53 5 0 0 0 0.046405 1 22037 33.229 33.229 1 1.5265 1.199 0 3146800 1379000 1767900 26928 1581 10148 10430 42180 42180 NQIVTILQDR 10 0 1 Unmodified _NQIVTILQDR_ 0 0 0 B2R935;A0A024R1S2;Q99741 B2R935 B2R935 CDC6 Cell division control protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.3395 2 600.340769 1198.66699 80605.08 0.53421 0.00032071 -0.40401 -0.00024254 0.1302 7.8162E-05 600.339870710849 605.344939153382 93.499 0.58089 93.499 93.093 93.673 0 75 36 3 0 0 0 0.057544 1 51362 35.269 35.269 1 1.1949 1.0328 0 1755300 667300 1088000 26929 85 10149 10431 42181 42181 NQLCDLETK 9 1 0 Unmodified _NQLCDLETK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;K7EJL0;K7EMU8 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.7688 2 560.768788 1119.52302 NaN NaN NaN 0.18884 0.0001059 NaN NaN NaN NaN 36.789 0.34872 36.789 36.613 36.962 0 0 0 0 0.051753 1 19012 46.462 37.517 1 NaN NaN 0 3417800 3417800 0 26930 222 10150 10432 42182 42182 NQLELLR 7 0 1 Unmodified _NQLELLR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.2613 2 443.261259 884.507966 88623.02 0.029596 1.3119E-05 -0.0057318 -2.5407E-06 0.023865 1.0578E-05 443.261323036792 448.265244601398 63.595 1.0965 63.595 62.872 63.968 0 515 107 6 0 0 0 0.010057 2 36227 118.01 43.294 1 0.83561 0.94625 0 105550000 60264000 45282000 26931 1750 10151 10433 42183;42184 42183 NQLELLR 7 0 1 Unmodified _NQLELLR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.2614 2 443.261259 884.507966 88479.71 0.050664 2.2458E-05 -0.281 -0.00012456 -0.23034 -0.0001021 443.261227269505 448.265140298312 61.998 1.0598 61.998 61.517 62.577 0 437 99 6 0 0 0 0.012579 2 36148 105.2 27.826 1 0.82748 0.94566 0 153270000 81692000 71581000 26932 1750 10151 10433 42185;42186 42186 NQLELLR 7 0 1 Unmodified _NQLELLR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 448.2647 2 443.261259 884.507966 90054.56 -0.043458 -1.9263E-05 -0.11442 -5.0719E-05 -0.15788 -6.9982E-05 443.261312297566 448.26520034973 72.909 1.1517 72.909 72.403 73.555 0 332 90 6 0 0 0 0.058932 1 37498 50.966 17.608 1 0.88327 0.72143 0 9287200 5088900 4198400 26933 1750 10151 10433 42187 42187 NQLQGLQK 8 1 0 Unmodified _NQLQGLQK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.7646 2 464.764166 927.513779 88624.72 0.37908 0.00017618 0.64789 0.00030112 1.027 0.0004773 464.764554647527 468.771285601287 25.075 0.41336 25.075 24.899 25.312 0 67 20 5 0 0 0 0.0084407 1 10737 78.616 29.026 1 0.78426 0.82632 0 30758000 18609000 12149000 26934 1887 10152 10434 42188 42188 NQLQGLQK 8 1 0 Unmodified _NQLQGLQK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.7639 2 464.764166 927.513779 90230.61 0.33237 0.00015447 -0.034166 -1.5879E-05 0.29821 0.0001386 464.764072899006 468.771150991154 24.86 0.31677 24.86 24.695 25.012 1.9073E-06 50 13 5 0 0 0 0.0077998 2 10503 81.381 38.315 1 1.0394 1.1275 0 22378000 11185000 11193000 26935 1887 10152 10434 42189;42190 42190 NQLTSNPENTVFDAK 15 1 0 Unmodified _NQLTSNPENTVFDAK_ 0 0 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.4158 2 839.407566 1676.80058 66880.5 0.56637 0.00047542 0.88075 0.00073931 1.4471 0.0012147 839.408051265669 843.41615538091 70.094 0.68404 70.094 69.776 70.46 0 204 61 6 0 0 0 3.9051E-10 2 40686 115.14 115.14 1 0.75076 0.73938 0 24241000 13640000 10601000 26936 1466 10153 10435 42191;42192 42192 NQLTSNPENTVFDAK 15 1 0 Unmodified _NQLTSNPENTVFDAK_ 0 0 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.4191 2 839.407566 1676.80058 65896.38 0.71303 0.00059853 0.77759 0.00065272 1.4906 0.0012512 839.407227684208 843.416074790195 69.061 0.623 69.061 68.705 69.328 0 250 53 6 0 0 0 4.8022E-15 4 40961 126.76 126.76 1 0.67102 0.68 0 26511000 15549000 10962000 26937 1466 10153 10435 42193;42194;42195;42196 42195 NQLTSNPENTVFDAK 15 1 0 Unmodified _NQLTSNPENTVFDAK_ 0 0 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 839.4088 2 839.407566 1676.80058 66806.49 0.35671 0.00029943 0.69469 0.00058313 1.0514 0.00088256 839.407894953056 843.41518239358 80.443 0.67759 80.443 80.182 80.859 0 201 48 6 0 0 0 0.00021964 2 43439 63.181 63.181 1 0.5727 0.45841 0 8647100 4752300 3894900 26938 1466 10153 10435 42197;42198 42197 NQLTSNPENTVFDAK 15 1 0 Unmodified _NQLTSNPENTVFDAK_ 0 0 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 839.9109 2 839.407566 1676.80058 67072.12 0.62252 0.00052255 0.53863 0.00045213 1.1611 0.00097468 839.407538453168 843.415387023822 80.772 0.66649 80.772 80.456 81.122 7.6294E-06 225 48 7 0 0 0 0.00022691 2 42758 74.46 74.46 1 0.5904 0.4834 0 5440700 3387500 2053200 26939 1466 10153 10435 42199;42200 42199 NQLVTPEPTSR 11 0 1 Unmodified _NQLVTPEPTSR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.3314 2 621.327859 1240.64116 76562.61 1.0076 0.00062602 -0.20084 -0.00012479 0.80671 0.00050123 621.327916903518 626.332008436111 38.169 0.44543 38.169 37.923 38.369 0 129 38 5 0 0 0 0.00044841 1 19499 77.677 63.908 1 0.48963 0.49373 0 17600000 10836000 6763900 26940 1738 10154 10436 42201 42201 NQLVTPEPTSR 11 0 1 Unmodified _NQLVTPEPTSR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.3286 2 621.327859 1240.64116 78145.41 0.31883 0.0001981 -0.052505 -3.2623E-05 0.26632 0.00016547 621.828980229589 626.332025801079 37.266 0.4308 37.266 37.079 37.51 0 142 35 6 0 0 0 0.00044841 2 19275 77.677 63.908 1 0.55923 0.58191 0 22182000 13578000 8604200 26941 1738 10154 10436 42202;42203 42202 NQLVTPEPTSR 11 0 1 Unmodified _NQLVTPEPTSR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.3324 2 621.327859 1240.64116 NaN NaN NaN -0.58787 -0.00036526 NaN NaN NaN NaN 43.307 0.42488 43.307 43.087 43.512 0 0 0 0 0.053247 1 20327 43.308 30.781 1 NaN NaN 0 1618600 0 1618600 26942 1738 10154 10436 42204 42204 NQLVTPEPTSR 11 0 1 Unmodified _NQLVTPEPTSR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.3284 2 621.327859 1240.64116 76911.43 0.33236 0.00020651 -0.054398 -3.3799E-05 0.27796 0.00017271 621.327862444404 626.331849192439 43.426 0.47397 43.426 43.187 43.661 -3.8147E-06 123 29 5 0 0 0 0.0015777 1 19869 66.435 55.911 1 0.44875 0.3942 0 3607200 2479800 1127400 26943 1738 10154 10436 42205 42205 NQMLMTPTSAPR 12 0 1 2 Oxidation (M) _NQM(ox)LM(ox)TPTSAPR_ NQM(1)LM(1)TPTSAPR NQM(140.49)LM(140.49)TPTSAPR 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.826 2 689.826311 1377.63807 71649.54 0.64962 0.00044812 0.1176 8.112E-05 0.76721 0.00052924 689.826385768777 694.830468602762 32.45 1.0181 32.45 31.903 32.921 0 456 94 8 0 0 0 1.1326E-17 3 16282 140.49 124.87 1 1.0301 1.1272 0 52704000 22768000 29936000 26944 2059 10155 10437 42206;42207;42208 42207 1891;1892 NQMLMTPTSAPR 12 0 1 2 Oxidation (M) _NQM(ox)LM(ox)TPTSAPR_ NQM(1)LM(1)TPTSAPR NQM(125.74)LM(125.74)TPTSAPR 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.8318 2 689.826311 1377.63807 NaN NaN NaN -0.23844 -0.00016449 NaN NaN NaN NaN 32.181 0.591 32.181 31.829 32.42 0 0 0 0 4.1385E-14 1 15837 125.74 99.044 1 NaN NaN 0 34938000 0 34938000 26945 2059 10155 10437 42209 42209 1891;1892 NQMLMTPTSAPR 12 0 1 2 Oxidation (M) _NQM(ox)LM(ox)TPTSAPR_ NQM(1)LM(1)TPTSAPR NQM(140.49)LM(140.49)TPTSAPR 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.8298 2 689.826311 1377.63807 72074.48 0.66827 0.00046099 -0.33296 -0.00022968 0.33531 0.0002313 689.826159448046 694.830069659788 32.135 1.0731 32.135 31.366 32.44 0 342 99 8 0 0 0 1.1326E-17 2 15987 140.49 103.65 1 1.135 1.2747 0 45775000 20485000 25290000 26946 2059 10155 10437 42210;42211 42211 1891;1892 NQMLMTPTSAPR 12 0 1 2 Oxidation (M) _NQM(ox)LM(ox)TPTSAPR_ NQM(1)LM(1)TPTSAPR NQM(87.15)LM(87.15)TPTSAPR 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.8309 2 689.826311 1377.63807 NaN NaN NaN -0.47675 -0.00032888 NaN NaN NaN NaN 31.675 0.71583 31.675 31.265 31.981 0 0 0 0 0.00011468 1 15529 87.149 71.998 1 NaN NaN 0 31671000 0 31671000 26947 2059 10155 10437 42212 42212 1891;1892 NQMLMTPTSAPR 12 0 1 2 Oxidation (M) _NQM(ox)LM(ox)TPTSAPR_ NQM(1)LM(1)TPTSAPR NQM(97.46)LM(97.46)TPTSAPR 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8271 2 689.826311 1377.63807 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.399 1 31.399 30.899 31.899 -1.9073E-06 0 0 0 1.1552E-06 1 15522 97.456 78.676 1 26948 2059 10155 10437 42213 42213 1891;1892 NQMLMTPTSAPR 12 0 1 2 Oxidation (M) _NQM(ox)LM(ox)TPTSAPR_ NQM(1)LM(1)TPTSAPR NQM(52.17)LM(52.17)TPTSAPR 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.8314 2 689.826311 1377.63807 72334.59 0.36689 0.00025309 -0.3459 -0.00023861 0.020991 1.448E-05 689.826169991267 694.830505394674 37.111 0.46205 37.111 36.882 37.344 0 202 38 7 0 0 0 0.005922 1 16636 52.167 47.227 1 1.1198 0.96055 0 8431900 3843500 4588400 26949 2059 10155 10437 42214 42214 1891;1892 NQMLMTPTSAPR 12 0 1 2 Oxidation (M) _NQM(ox)LM(ox)TPTSAPR_ NQM(1)LM(1)TPTSAPR NQM(51.44)LM(51.44)TPTSAPR 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.8301 2 689.826311 1377.63807 72361.39 0.33165 0.00022878 -0.27131 -0.00018716 0.060335 4.1621E-05 689.826266289581 694.830451982055 37.26 0.48338 37.26 37.034 37.517 0 233 41 7 0 0 0 0.0062647 1 16267 51.436 41.655 1 1.1805 0.97622 0 8047600 3787100 4260500 26950 2059 10155 10437 42215 42215 1891;1892 NQNLMLELETVQQALR 16 0 1 Oxidation (M) _NQNLM(ox)LELETVQQALR_ NQNLM(1)LELETVQQALR NQNLM(47.29)LELETVQQALR 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 958.4995 2 958.498932 1914.98331 66160.65 0.46401 0.00044476 -0.13033 -0.00012492 0.33369 0.00031984 958.499276588316 963.503014019077 117.49 0.33835 117.49 117.33 117.67 0 76 22 6 0 0 0 0.00045941 1 75208 47.288 42.111 1 1.4599 1.5047 0 6263200 2859700 3403600 26951 1581 10156 10438 42216 42216 1364 NQNLMLELETVQQALR 16 0 1 Oxidation (M) _NQNLM(ox)LELETVQQALR_ NQNLM(1)LELETVQQALR NQNLM(70.49)LELETVQQALR 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 963.9567 2 958.498932 1914.98331 64354.71 0.56617 0.00054267 -0.085996 -8.2428E-05 0.48017 0.00046025 959.000214397622 963.502670207092 117.02 0.38474 117.02 116.81 117.19 0 64 22 5 0 0 0 2.1493E-05 1 76650 70.488 70.488 1 0.94859 0.94918 0 6879700 3425100 3454600 26952 1581 10156 10438 42217 42217 1364 NQNSWGTGEDVK 12 1 0 Unmodified _NQNSWGTGEDVK_ 0 0 0 P20700;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.8113 2 667.802205 1333.58986 79596.07 0.57636 0.0003849 -0.067686 -4.5201E-05 0.50868 0.00033969 667.802212743097 671.80917075052 29.623 0.38391 29.623 29.516 29.9 -1.9073E-06 77 31 5 0 0 0 1.1973E-22 2 14342 155.06 148.39 1 1.0257 1.0055 0 20769000 10866000 9903300 26953 1502 10157 10439 42218;42219 42218 NQNSWGTGEDVK 12 1 0 Unmodified _NQNSWGTGEDVK_ 0 0 0 P20700;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8022 2 667.802205 1333.58986 76279.48 0.9884 0.00066005 -0.19156 -0.00012792 0.79684 0.00053213 667.802114116046 671.809307484035 29.186 0.3646 29.186 29.08 29.444 0 62 25 4 0 0 0 2.7563E-29 2 14022 167.67 151.79 1 1.0548 1.1266 0 23111000 10555000 12556000 26954 1502 10157 10439 42220;42221 42221 NQPDYYEVVSQPIDLMK 17 1 0 Oxidation (M) _NQPDYYEVVSQPIDLM(ox)K_ NQPDYYEVVSQPIDLM(1)K NQPDYYEVVSQPIDLM(40.48)K 0 1 0 Q86U86;E7EVG2;H0Y5B5;C9J053;C9JQF1;C9JPI5 Q86U86 Q86U86 PBRM1 Protein polybromo-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1027.9937 2 1027.99061 2053.96666 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.5 1 101.5 101 102 0 0 0 0 0.015364 1 63912 40.475 25.599 1 26955 1883 10158 10440 42222 42222 1727 NQPTNVTLSSGFVADR 16 0 1 Unmodified _NQPTNVTLSSGFVADR_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.4332 2 853.428832 1704.84311 67015.84 0.2032 0.00017341 0.66735 0.00056953 0.87054 0.00074295 853.429927537914 858.433065735544 76.463 0.51562 76.463 76.232 76.747 0 201 37 7 0 0 0 3.4041E-06 2 46038 89.301 89.301 1 0.31627 0.36807 0 60473000 45767000 14706000 26956 1965 10159 10441 42223;42224 42224 NQPTNVTLSSGFVADR 16 0 1 Unmodified _NQPTNVTLSSGFVADR_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 853.4289 2 853.428832 1704.84311 66081.63 0.90134 0.00076923 0.45032 0.00038431 1.3517 0.0011535 853.428755304983 858.432865792124 88.714 0.6629 88.714 88.37 89.033 7.6294E-06 300 42 10 0 0 0 0.00010011 2 48972 79.466 74.151 1 0.59524 0.4878 0 16697000 10700000 5996400 26957 1965 10159 10441 42225;42226 42226 NQPTNVTLSSGFVADR 16 0 1 Unmodified _NQPTNVTLSSGFVADR_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.4321 2 853.428832 1704.84311 66262.1 0.46119 0.0003936 1.2921 0.0011027 1.7533 0.0014963 853.429305836433 858.433244422359 88.694 0.57181 88.694 88.414 88.986 0 275 36 10 0 0 0 0.000319 1 48044 54.343 54.343 1 0.59667 0.49381 0 14842000 9647200 5194700 26958 1965 10159 10441 42227 42227 NQQITHANNTVSNFK 15 1 0 Unmodified _NQQITHANNTVSNFK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DZB4;A0A0A0MSM0;R4GN69 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.4351 2 858.426624 1714.8387 66647.94 0.54132 0.00046468 -1.2819 -0.0011004 -0.74054 -0.0006357 858.927694497052 862.431583515122 28.393 0.27765 28.393 28.262 28.54 -1.9073E-06 57 19 6 0 0 0 5.9406E-58 2 13347 204.48 204.48 1 2.0862 2.1149 0 27705000 9251400 18454000 26959 390 10160 10442 42228;42229 42228 NQQITHANNTVSNFK 15 1 0 Unmodified _NQQITHANNTVSNFK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DZB4;A0A0A0MSM0;R4GN69 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.2919 3 572.620175 1714.8387 79955.07 0.39263 0.00022483 -0.20396 -0.00011679 0.18867 0.00010804 572.619914579207 575.625695639515 28.385 0.26719 28.385 28.245 28.513 -1.9073E-06 71 18 5 0 0 0 1.2774E-15 2 13366 105.46 101.28 1 2.3358 2.3691 0 27743000 6890100 20853000 26960 390 10160 10442 42230;42231 42230 NQQITHANNTVSNFK 15 1 0 Unmodified _NQQITHANNTVSNFK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DZB4;A0A0A0MSM0;R4GN69 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.9363 2 858.426624 1714.8387 65703.78 0.34719 0.00029804 0.53521 0.00045944 0.8824 0.00075748 858.927936840343 862.935504394748 27.527 0.39656 27.527 27.34 27.737 -1.9073E-06 54 20 5 0 0 0 5.1259E-100 1 12796 238.13 213.84 1 1.3635 1.3625 0 15222000 5718000 9504100 26961 390 10160 10442 42232 42232 NQQITHANNTVSNFK 15 1 0 Unmodified _NQQITHANNTVSNFK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DZB4;A0A0A0MSM0;R4GN69 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.2919 3 572.620175 1714.8387 80839.52 0.32407 0.00018557 -0.089138 -5.1042E-05 0.23494 0.00013453 572.954250877103 575.291580634067 27.528 0.24767 27.528 27.401 27.649 0 50 12 5 0 0 0 2.0678E-22 2 12817 112.96 112.96 1 2.3956 2.5217 0 35124000 11210000 23914000 26962 390 10160 10442 42233;42234 42233 NQQPVLPAGLQVPK 14 1 0 Unmodified _NQQPVLPAGLQVPK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.9302 2 744.930283 1487.84601 74349.16 0.78243 0.00058285 -0.41484 -0.00030903 0.36759 0.00027383 745.431334628906 748.937335160488 91.21 0.78169 91.21 90.812 91.593 0 289 67 6 0 0 0 0.0054367 3 56324 43.77 43.77 1 0.86409 0.87224 0 28384000 15649000 12735000 26963 1676 10161 10443 42235;42236;42237 42236 NQQPVLPAGLQVPK 14 1 0 Unmodified _NQQPVLPAGLQVPK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.9323 2 744.930283 1487.84601 70208.02 0.81204 0.00060491 -0.019742 -1.4707E-05 0.7923 0.00059021 744.930149895413 748.937445639949 105.73 0.50299 105.73 105.5 106 0 165 29 7 0 0 0 0.018481 2 60252 34.378 34.378 1 1.0077 0.78047 0 13168000 6278700 6889700 26964 1676 10161 10443 42238;42239 42239 NQQPVLPAGLQVPK 14 1 0 Unmodified _NQQPVLPAGLQVPK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.9381 2 744.930283 1487.84601 71444.52 0.62249 0.00046371 0.007202 5.365E-06 0.62969 0.00046908 744.930035090186 748.937554451497 105.52 0.56708 105.52 105.21 105.77 0 224 40 7 0 0 0 0.040346 2 59232 28.204 28.204 1 1.024 0.8439 0 10764000 4711200 6053000 26965 1676 10161 10443 42240;42241 42241 NQSFASTHLNQNSSR 15 0 1 Unmodified _NQSFASTHLNQNSSR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.9028 2 845.898231 1689.78191 66536.59 0.76783 0.0006495 -0.012891 -1.0904E-05 0.75494 0.0006386 846.39963724404 850.902382924722 24.002 0.27884 24.002 23.885 24.164 0 65 13 8 0 0 0 9.092E-31 2 9798 186.51 177.78 1 0.69742 0.77167 0 60322000 33190000 27132000 26966 1421 10162 10444 42242;42243 42243 NQSFASTHLNQNSSR 15 0 1 Unmodified _NQSFASTHLNQNSSR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.268 3 564.267913 1689.78191 79942.77 0.67459 0.00038065 0.29106 0.00016423 0.96565 0.00054488 564.602107340422 567.603937375697 24.015 0.54915 24.015 23.688 24.237 0 100 26 8 0 0 0 8.4574E-08 1 9804 107.07 107.07 1 0.74781 0.83181 0 76415000 48479000 27936000 26967 1421 10162 10444 42244 42244 NQSFASTHLNQNSSR 15 0 1 Unmodified _NQSFASTHLNQNSSR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.8985 2 845.898231 1689.78191 65732.51 0.64146 0.00054261 -0.084173 -7.1202E-05 0.55729 0.00047141 845.89804923152 850.902524160038 23.659 0.30313 23.659 23.57 23.873 0 59 11 7 0 0 0 5.545E-99 2 9490 243.3 231.24 1 0.87718 1.0112 0 54659000 27827000 26831000 26968 1421 10162 10444 42245;42246 42245 NQSFASTHLNQNSSR 15 0 1 Unmodified _NQSFASTHLNQNSSR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.6042 3 564.267913 1689.78191 80086.1 0.58329 0.00032913 -0.34403 -0.00019413 0.23926 0.00013501 564.267722867841 567.603707518912 23.705 0.62337 23.705 23.363 23.987 -1.9073E-06 103 25 9 0 0 0 1.0984E-06 2 9526 97.836 91.255 1 0.74568 0.85557 0 80656000 49450000 31205000 26969 1421 10162 10444 42247;42248 42248 NQSFASTHLNQNSSR 15 0 1 Unmodified _NQSFASTHLNQNSSR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 850.9023 2 845.898231 1689.78191 66746.96 0.56777 0.00048028 0.16495 0.00013953 0.73272 0.00061981 845.89839393903 850.902546920821 26.723 0.43186 26.723 26.528 26.96 1.9073E-06 145 20 10 0 0 0 0.0047396 2 10113 40.066 36.421 1 1.1435 0.93483 0 13808000 6319700 7487800 26970 1421 10162 10444 42249;42250 42249 NQSFASTHLNQNSSR 15 0 1 Unmodified _NQSFASTHLNQNSSR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.2684 3 564.267913 1689.78191 80173.21 0.51786 0.00029221 0.16349 9.2251E-05 0.68135 0.00038446 564.268149624801 567.604132917078 26.721 0.65905 26.721 26.483 27.142 0 143 31 7 0 0 0 5.5794E-05 2 10167 77.562 77.562 1 1.2564 1.062 0 30232000 12651000 17580000 26971 1421 10162 10444 42251;42252 42251 NQSFASTHLNQNSSR 15 0 1 Unmodified _NQSFASTHLNQNSSR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.6042 3 564.267913 1689.78191 79540.73 0.26116 0.00014736 0.38014 0.0002145 0.6413 0.00036186 564.602373413971 567.604190526715 26.832 0.76932 26.832 26.48 27.249 0 220 35 10 0 0 0 6.8609E-05 2 9680 68.257 61.819 1 1.2703 1.0968 0 22727000 10048000 12678000 26972 1421 10162 10444 42253;42254 42254 NQSFCPTVNLDK 12 1 0 Unmodified _NQSFCPTVNLDK_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.8384 2 711.837733 1421.66091 72572.6 0.9179 0.00065339 -0.26185 -0.00018639 0.65605 0.000467 711.837780258778 715.844702471023 67.959 0.77371 67.959 67.628 68.401 0 402 66 10 0 0 0 1.2373E-23 2 39344 162.36 162.36 1 0.69572 0.81037 0 262200000 149960000 112230000 26973 1247 10163 10445 42255;42256 42256 NQSFCPTVNLDK 12 1 0 Unmodified _NQSFCPTVNLDK_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.8386 2 711.837733 1421.66091 72007.02 0.55833 0.00039744 -0.026737 -1.9033E-05 0.53159 0.00037841 711.837922859203 715.844844975428 66.816 0.87465 66.816 66.376 67.251 0 407 74 10 0 0 0 6.9879E-38 2 39468 183 175.28 1 0.74518 0.87251 0 307550000 183330000 124220000 26974 1247 10163 10445 42257;42258 42258 NQSFCPTVNLDK 12 1 0 Unmodified _NQSFCPTVNLDK_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 711.8386 2 711.837733 1421.66091 70586.51 0.57842 0.00041174 -0.22423 -0.00015962 0.35419 0.00025212 711.838002593753 715.844758127302 77.891 1.8529 77.891 77.394 79.247 0 572 119 12 0 0 0 1.5678E-22 2 41646 152.54 152.54 1 0.84679 0.74062 0 185010000 101350000 83662000 26975 1247 10163 10445 42259;42260 42260 NQSFCPTVNLDK 12 1 0 Unmodified _NQSFCPTVNLDK_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 715.8453 2 711.837733 1421.66091 70841.45 0.64922 0.00046214 -0.26577 -0.00018919 0.38345 0.00027295 711.837999852271 715.844725693063 78.216 1.5451 78.216 77.865 79.41 0 515 98 12 0 0 0 1.1615E-17 2 41030 138.22 133.89 1 0.86751 0.74611 0 162410000 89664000 72744000 26976 1247 10163 10445 42261;42262 42261 NQSIIVSGESGAGK 14 1 0 Unmodified _NQSIIVSGESGAGK_ 0 0 0 Q9NQX4 Q9NQX4 Q9NQX4 MYO5C Unconventional myosin-Vc ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.8562 2 673.849155 1345.68376 NaN NaN NaN -0.76929 -0.00051839 NaN NaN NaN NaN 36.783 0.22388 36.783 36.657 36.881 0 0 0 0 0.0053546 1 18662 55.452 19.508 1 NaN NaN 0 4563600 0 4563600 26977 2062 10164 10446 42263 42263 NQSIIVSGESGAGK 14 1 0 Unmodified _NQSIIVSGESGAGK_ 0 0 0 Q9NQX4 Q9NQX4 Q9NQX4 MYO5C Unconventional myosin-Vc ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8577 2 673.849155 1345.68376 NaN NaN NaN -0.33248 -0.00022404 NaN NaN NaN NaN 36.009 0.41596 36.009 35.853 36.269 0 0 0 0 0.0020359 1 18469 67.08 41.141 1 NaN NaN 0 6921100 0 6921100 26978 2062 10164 10446 42264 42264 NQSLTLIELLK 11 1 0 Unmodified _NQSLTLIELLK_ 0 0 0 A7E234;Q9H582;Q9NVH8;Q9H8J8;Q8NEI6 A7E234 A7E234 ZNF644 Zinc finger protein 644 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.3903 2 636.382103 1270.74965 78529.8 0.95909 0.00061035 0.1005 6.3956E-05 1.0596 0.0006743 636.382111131032 640.389136347429 119.44 0.45953 119.44 119.19 119.65 0 116 30 5 0 0 0 0.0033031 1 76799 60.064 49.832 1 0.69253 0.6978 0 5388700 3242800 2145800 26979 693 10165 10447 42265 42265 NQSLTLIELLK 11 1 0 Unmodified _NQSLTLIELLK_ 0 0 0 A7E234;Q9H582;Q9NVH8;Q9H8J8;Q8NEI6 A7E234 A7E234 ZNF644 Zinc finger protein 644 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3835 2 636.382103 1270.74965 77859.88 0.62026 0.00039472 0.2171 0.00013816 0.83737 0.00053288 636.38212272587 640.38923535887 118.86 0.45928 118.86 118.65 119.11 -7.6294E-06 105 28 5 0 0 0 0.0012626 2 78188 68.847 68.847 1 0.79842 0.80311 0 7092800 3572700 3520000 26980 693 10165 10447 42266;42267 42266 NQSLTLIELLK 11 1 0 Unmodified _NQSLTLIELLK_ 0 0 0 A7E234;Q9H582;Q9NVH8;Q9H8J8;Q8NEI6 A7E234 A7E234 ZNF644 Zinc finger protein 644 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3894 2 636.382103 1270.74965 77033.66 0.86729 0.00055193 -0.21137 -0.00013451 0.65592 0.00041742 636.381939123197 640.389150832204 132.05 0.38979 132.05 131.86 132.25 0 69 17 6 0 0 0 0.0088222 2 80235 50.108 50.108 1 1.1334 0.96052 0 1496400 678910 817520 26981 693 10165 10447 42268;42269 42268 NQSLTLIELLK 11 1 0 Unmodified _NQSLTLIELLK_ 0 0 0 A7E234;Q9H582;Q9NVH8;Q9H8J8;Q8NEI6 A7E234 A7E234 ZNF644 Zinc finger protein 644 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.3897 2 636.382103 1270.74965 76962.09 1.0638 0.00067699 0.16877 0.0001074 1.2326 0.00078439 636.38207763045 640.389489818769 131.83 0.46991 131.83 131.56 132.03 0 53 17 6 0 0 0 0.0087246 2 79132 50.284 49.321 1 1.1828 0.95862 0 2699900 1185400 1514500 26982 693 10165 10447 42270;42271 42270 NQSLVEENEK 10 1 0 Unmodified _NQSLVEENEK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.2883 2 595.288399 1188.56225 77577.12 0.86907 0.00051735 -1.0934 -0.00065089 -0.22433 -0.00013354 595.288189988716 599.295241544077 22.741 0.82561 22.741 22.588 23.414 0 134 44 6 0 0 0 1.2241E-05 2 8729 103.55 77.987 1 0.90772 0.97722 0 33381000 16152000 17229000 26983 1803 10166 10448 42272;42273 42273 NQSPVLEPVGR 11 0 1 Unmodified _NQSPVLEPVGR_ 0 0 0 B4DKZ2;B4DG22;B7ZB17;P51812 B4DKZ2 B4DKZ2 RPS6KA3 Ribosomal protein S6 kinase alpha-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.3308 2 598.325119 1194.63569 81392.95 0.99452 0.00059504 -0.20114 -0.00012035 0.79337 0.00047469 598.324647264895 603.329192888478 48.294 0.31422 48.294 48.177 48.491 0 80 21 5 0 0 0 0.0010483 2 26971 62.823 62.823 1 1.6095 1.6124 0 17193000 7095800 10098000 26984 971 10167 10449 42274;42275 42274 NQSQGYNQWQQGQFWGQK 18 1 0 Unmodified _NQSQGYNQWQQGQFWGQK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1107.0021 2 1106.50138 2210.98821 58369.51 -0.065567 -7.255E-05 0.34266 0.00037915 0.27709 0.0003066 1107.0029727865 1111.00990882291 81.143 0.87617 81.143 80.821 81.697 0 358 75 8 0 0 0 5.5067E-30 4 48209 144.1 144.1 1 1.3239 1.2971 0 21545000 10673000 10872000 26985 999 10168 10450 42276;42277;42278;42279 42279 NQSQGYNQWQQGQFWGQK 18 1 0 Unmodified _NQSQGYNQWQQGQFWGQK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1107.0046 2 1106.50138 2210.98821 58649.13 0.1758 0.00019453 0.13979 0.00015468 0.3156 0.00034921 1107.0029245619 1111.0097603459 80.175 0.71046 80.175 79.892 80.603 0 296 56 8 0 0 0 2.8807E-16 3 48666 113.63 113.63 1 1.4036 1.4186 0 28686000 12827000 15859000 26986 999 10168 10450 42280;42281;42282 42282 NQSSDSSSACLEIK 14 1 0 Unmodified _NQSSDSSSACLEIK_ 0 0 0 A0A1B0GUH9;A0A1P0AZG4;A0PJI9 A0A1B0GUH9 A0A1B0GUH9 C10orf12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.8524 2 763.343577 1524.6726 NaN NaN NaN 0.28481 0.00021741 NaN NaN NaN NaN 39.887 0.27526 39.887 39.835 40.111 0 0 0 0 0.0069514 1 20821 54.143 41.107 1 NaN NaN 0 3062600 0 3062600 26987 630 10169 10451 42283 42283 NQSSDSSSACLEIK 14 1 0 Unmodified _NQSSDSSSACLEIK_ 0 0 0 A0A1B0GUH9;A0A1P0AZG4;A0PJI9 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.3443 2 763.343577 1524.6726 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.011 1 39.011 38.511 39.511 0 0 0 0 0.002706 1 20588 60.49 45.799 1 26988 630 10169 10451 42284 42284 NQVALNPQNTVFDAK 15 1 0 Unmodified _NQVALNPQNTVFDAK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4E388;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.9362 2 829.928468 1657.84238 66535.19 0.89004 0.00073867 0.056333 4.6752E-05 0.94637 0.00078542 829.928536601081 833.935503888885 80.121 0.84171 80.121 79.836 80.678 0 411 71 9 0 0 0 2.9284E-84 2 47564 217.14 198.87 1 0.80347 0.94738 0 338830000 184890000 153940000 26989 533 10170 10452 42285;42286 42286 NQVALNPQNTVFDAK 15 1 0 Unmodified _NQVALNPQNTVFDAK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4E388;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.9288 2 829.928468 1657.84238 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.682 1 80.682 80.182 81.182 0 0 0 0 0.0029896 1 47996 55.452 39.562 1 26990 533 10170 10452 42287 42287 NQVALNPQNTVFDAK 15 1 0 Unmodified _NQVALNPQNTVFDAK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4E388;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.936 2 829.928468 1657.84238 66108.28 0.79343 0.00065849 0.18167 0.00015077 0.9751 0.00080926 829.928651970709 833.935575963798 79.189 0.72678 79.189 78.846 79.573 0 456 62 10 0 0 0 6.1103E-58 2 47963 188.96 188.96 1 0.79927 0.93485 0 294140000 166090000 128050000 26991 533 10170 10452 42288;42289 42289 NQVALNPQNTVFDAK 15 1 0 Unmodified _NQVALNPQNTVFDAK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4E388;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.9361 2 829.928468 1657.84238 67162.29 0.71239 0.00059124 0.299 0.00024815 1.0114 0.00083938 829.928900709107 833.935659204208 91.88 1.0455 91.88 91.542 92.588 7.6294E-06 398 63 10 0 0 0 0.00022295 3 50947 74.46 74.46 1 1.0704 0.88983 0 46705000 24010000 22695000 26992 533 10170 10452 42290;42291;42292 42290 NQVALNPQNTVFDAK 15 1 0 Unmodified _NQVALNPQNTVFDAK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4E388;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 833.9359 2 829.928468 1657.84238 66873.46 0.58437 0.00048499 0.34684 0.00028785 0.93121 0.00077284 829.929084793012 833.935675099373 91.684 1.0246 91.684 91.358 92.382 0 394 62 10 0 0 0 0.00025136 3 50017 66.393 62.815 1 1.1147 0.92999 0 41921000 19251000 22671000 26993 533 10170 10452 42293;42294;42295 42294 NQVAMNPTNTVFDAK 15 1 0 Oxidation (M) _NQVAM(ox)NPTNTVFDAK_ NQVAM(1)NPTNTVFDAK NQVAM(193.73)NPTNTVFDAK 0 1 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.9077 2 833.398686 1664.78282 64897.04 0.5538 0.00046154 -0.28326 -0.00023606 0.27055 0.00022547 833.398040995137 837.405812769789 59.104 0.75866 59.104 58.828 59.587 0 409 59 11 0 0 0 1.7952E-58 2 33489 193.73 179.5 1 1.4133 1.6429 0 252210000 100290000 151920000 26994 1467 10171 10453 42296;42297 42297 1180 NQVAMNPTNTVFDAK 15 1 0 Oxidation (M) _NQVAM(ox)NPTNTVFDAK_ NQVAM(1)NPTNTVFDAK NQVAM(176.18)NPTNTVFDAK 0 1 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.406 2 833.398686 1664.78282 65116.63 0.56561 0.00047138 -0.39685 -0.00033073 0.16876 0.00014064 833.397891164001 837.405684029721 58.044 0.77892 58.044 57.78 58.559 3.8147E-06 349 60 10 0 0 0 1.5346E-47 2 33537 176.18 168.92 1 1.5322 1.7899 0 279410000 109200000 170210000 26995 1467 10171 10453 42298;42299 42298 1180 NQVAMNPTNTVFDAK 15 1 0 Oxidation (M) _NQVAM(ox)NPTNTVFDAK_ NQVAM(1)NPTNTVFDAK NQVAM(101.72)NPTNTVFDAK 0 1 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.3995 2 833.398686 1664.78282 64860.43 0.43489 0.00036244 0.26204 0.00021838 0.69693 0.00058082 833.399385701583 837.405840631202 68.706 0.7562 68.706 68.441 69.198 0 401 55 10 0 0 0 2.5995E-07 1 35864 101.72 97.175 1 0.94872 0.76701 0 23024000 11853000 11171000 26996 1467 10171 10453 42300 42300 1180 NQVAMNPTNTVFDAK 15 1 0 Oxidation (M) _NQVAM(ox)NPTNTVFDAK_ NQVAM(1)NPTNTVFDAK NQVAM(91.2)NPTNTVFDAK 0 1 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 833.3994 2 833.398686 1664.78282 65960.07 0.63055 0.0005255 0.018235 1.5197E-05 0.64878 0.00054069 833.399140184965 837.405603724029 69.306 0.79116 69.306 68.982 69.774 0 399 54 10 0 0 0 5.9986E-06 1 35427 91.202 91.202 1 0.94524 0.76536 0 24135000 12521000 11614000 26997 1467 10171 10453 42301 42301 1180 NQVDVEIK 8 1 0 Unmodified _NQVDVEIK_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8VWY4;F8VWX0;F8W0L1;F8VZ66;F8VV47;F8VVE5;F8VUW9;F8VV39;F8VQZ5;F8VS54;F8VV37;F8VYH6 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.7627 2 472.756007 943.497461 NaN NaN NaN 0.6602 0.00031212 NaN NaN NaN NaN 37.674 0.53033 37.674 37.341 37.871 0 0 0 0 0.052149 1 19665 49.097 16.742 1 NaN NaN 0 13697000 0 13697000 26998 68 10172 10454 42302 42302 NQVGDENWR 9 0 1 Unmodified _NQVGDENWR_ 0 0 0 A0A024RAM0;Q92973;S4R398 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.2592 2 559.254694 1116.49483 80805.13 0.97791 0.0005469 -0.097182 -5.435E-05 0.88073 0.00049255 559.254330353852 564.258686148735 28.693 0.29529 28.693 28.498 28.794 0 51 16 5 0 0 0 2.5262E-05 1 13613 113.71 103.24 1 2.8269 2.8671 0 15120000 4442400 10678000 26999 309 10173 10455 42303 42303 NQVGDENWR 9 0 1 Unmodified _NQVGDENWR_ 0 0 0 A0A024RAM0;Q92973;S4R398 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.2599 2 559.254694 1116.49483 79943.3 0.52902 0.00029586 0.016994 9.504E-06 0.54601 0.00030536 559.254604450543 564.258900826003 28.045 0.22274 28.045 27.907 28.13 0 48 13 5 0 0 0 1.8757E-05 1 13233 119.29 115.9 1 2.696 2.7235 0 19794000 5499200 14294000 27000 309 10173 10455 42304 42304 NQVLVFVHSR 10 0 1 Unmodified _NQVLVFVHSR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.8429 2 599.838197 1197.66184 81101.29 0.71478 0.00042875 0.29688 0.00017808 1.0117 0.00060684 599.838494505363 604.842326844785 57.12 0.51688 57.12 56.877 57.394 0 121 39 5 0 0 0 0.00069328 1 32130 82.749 82.749 1 0.9966 1.0447 0 12320000 5343900 6976600 27001 1411 10174 10456 42305 42305 NQVLVFVHSR 10 0 1 Unmodified _NQVLVFVHSR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.8387 2 599.838197 1197.66184 79462.95 0.72628 0.00043565 0.37011 0.00022201 1.0964 0.00065766 599.837959694376 604.84283999931 65.682 0.57351 65.682 65.397 65.97 0 168 43 6 0 0 0 0.024874 2 34001 44.863 44.863 1 0.80726 0.67521 0 3205900 1654600 1551300 27002 1411 10174 10456 42306;42307 42307 NQVLVFVHSR 10 0 1 Unmodified _NQVLVFVHSR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.3394 2 599.838197 1197.66184 81631.35 0.45161 0.00027089 0.44517 0.00026703 0.89677 0.00053792 599.837933118123 604.843458350409 65.889 0.57288 65.889 65.563 66.136 0 134 45 5 0 0 0 0.012557 1 33356 50.473 50.473 1 0.28058 0.24694 0 1872300 1244900 627340 27003 1411 10174 10456 42308 42308 NREEFEDQSLEK 12 1 1 Unmodified _NREEFEDQSLEK_ 0 0 1 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40;F5H176 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.3524 2 762.352259 1522.68997 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.034 1 29.034 28.534 29.534 0 0 0 0 1.6646E-08 1 13930 107.85 54.52 1 27004 1224 10175 10457 42309 42309 NREEFEDQSLEK 12 1 1 Unmodified _NREEFEDQSLEK_ 0 0 1 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40;F5H176 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.3531 2 762.352259 1522.68997 71436.12 0.71453 0.00054472 -0.14776 -0.00011264 0.56677 0.00043208 762.352385876699 771.362995753884 28.153 0.22287 28.153 28.038 28.261 0 24 9 6 0 0 0 1.4298E-07 1 13387 119.39 119.39 1 0.54396 0.61694 0 17194000 7289600 9904200 27005 1224 10175 10457 42310 42310 NREELGFRPEYSASQLK 17 1 2 Unmodified _NREELGFRPEYSASQLK_ 0 0 2 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3476 3 675.344711 2023.0123 75573 0.652 0.00044032 0.090724 6.127E-05 0.74272 0.00050159 675.679642556305 685.022265149264 58.296 0.47305 58.296 57.99 58.463 0 97 33 5 0 0 0 0.010419 1 33952 37.083 22.611 1 0.58535 0.65962 0 21117000 12240000 8877700 27006 139 10176 10458 42311 42311 NREELGFRPEYSASQLK 17 1 2 Unmodified _NREELGFRPEYSASQLK_ 0 0 2 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.6799 3 675.344711 2023.0123 73196.57 0.51292 0.0003464 -0.24794 -0.00016744 0.26499 0.00017896 675.343441981747 684.688477199916 68.527 0.70149 68.527 68.327 69.028 0 261 52 8 0 0 0 0.019862 1 35796 28.549 28.549 1 1.0057 0.94061 0 10082000 5001500 5080200 27007 139 10176 10458 42312 42312 NREPVQLETLSIR 13 0 2 Unmodified _NREPVQLETLSIR_ 0 0 1 P62314;Q7Z5A3;J3QLI9 P62314 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.2919 3 518.958128 1553.85255 83051.84 0.54725 0.000284 -0.49763 -0.00025825 0.049618 2.575E-05 519.291764525408 525.630250134007 75.344 1.3041 75.344 74.648 75.952 0 461 110 7 0 0 0 5.4577E-05 1 44253 74.475 63.831 1 0.81214 0.88461 0 87172000 45393000 41779000 27008 1644 10177 10459 42313 42313 NREPVQLETLSIR 13 0 2 Unmodified _NREPVQLETLSIR_ 0 0 1 P62314;Q7Z5A3;J3QLI9 P62314 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.9581 3 518.958128 1553.85255 83539.59 0.25115 0.00013034 0.027857 1.4456E-05 0.27901 0.00014479 518.958132299389 525.630351356696 73.72 0.99373 73.72 73.145 74.139 7.6294E-06 361 82 8 0 0 0 0.00011348 1 44311 68.277 59.893 1 0.94747 1.1049 0 99156000 47730000 51426000 27009 1644 10177 10459 42314 42314 NREPVQLETLSIR 13 0 2 Unmodified _NREPVQLETLSIR_ 0 0 1 P62314;Q7Z5A3;J3QLI9 P62314 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.6304 3 518.958128 1553.85255 83661.17 0.2709 0.00014059 0.12752 6.618E-05 0.39843 0.00020677 518.958132242927 525.630321100139 85.994 0.64945 85.994 85.684 86.334 0 264 44 8 0 0 0 0.00016992 2 47102 49.188 49.188 1 0.71754 0.60484 0 10805000 6386700 4418700 27010 1644 10177 10459 42315;42316 42316 NREPVQLETLSIR 13 0 2 Unmodified _NREPVQLETLSIR_ 0 0 1 P62314;Q7Z5A3;J3QLI9 P62314 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.2923 3 518.958128 1553.85255 83886.7 0.33123 0.00017189 0.085524 4.4384E-05 0.41675 0.00021628 518.95813392699 525.630258904482 85.97 0.69781 85.97 85.573 86.271 0 214 38 7 0 0 0 0.021209 1 46172 30.133 25.243 1 0.78339 0.71854 0 11533000 7035800 4497400 27011 1644 10177 10459 42317 42317 NRNELAETLALLK 13 1 1 Unmodified _NRNELAETLALLK_ 0 0 1 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.9265 2 742.925197 1483.83584 74298.62 0.7451 0.00055356 0.1721 0.00012785 0.9172 0.00068141 742.925383500729 751.936490743507 104.97 0.84227 104.97 104.56 105.4 0 128 68 4 0 0 0 0.050259 1 64652 46.844 21.185 1 0.46434 0.52088 0 6588700 4822600 1766100 27012 1991 10178 10460 42318 42318 NRPAPYSRPK 10 1 2 Unmodified _NRPAPYSRPK_ 0 0 2 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 395.888 3 395.887756 1184.64144 93426.15 -0.3762 -0.00014893 0.73315 0.00029025 0.35695 0.00014131 395.888035383937 405.231519697941 15.08 0.54672 15.08 14.924 15.471 -9.5367E-07 43 22 5 0 0 0 0.041721 1 2817 29.534 23.24 1 0.45213 0.49008 0 10611000 8154700 2455900 27013 1229 10179 10461 42319 42319 NRPEPHSDENGSTTPK 16 1 1 Unmodified _NRPEPHSDENGSTTPK_ 0 0 1 B2R5U7;C9J9W7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.2825 3 589.274844 1764.8027 NaN NaN NaN NaN NaN NaN NaN NaN NaN 14.619 1 14.619 14.119 15.119 -9.5367E-07 0 0 0 0.00047231 1 2499 65.105 54.25 1 27014 836;1683 10180 10462 42320 42320 NRPEPHSDENGSTTPK 16 1 1 Unmodified _NRPEPHSDENGSTTPK_ 0 0 1 B2R5U7;C9J9W7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.2751 3 589.274844 1764.8027 NaN NaN NaN NaN NaN NaN NaN NaN NaN 14.628 1 14.628 14.128 15.128 0 0 0 0 0.0004494 1 2506 56.514 50.973 1 27015 836;1683 10180 10462 42321 42321 NRPEPHSDENGSTTPK 16 1 1 Unmodified _NRPEPHSDENGSTTPK_ 0 0 1 B2R5U7;C9J9W7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.2828 3 589.274844 1764.8027 73373 0.44214 0.00026054 -0.28626 -0.00016869 0.15588 9.1854E-05 589.608989713783 595.615991525188 14.81 0.12934 14.81 14.722 14.852 0 13 5 4 0 0 0 0.0036441 1 2418 26.474 22.232 1 1.9861 1.8172 0 1497100 518280 978810 27016 836;1683 10180 10462 42322 42322 NRPNVQVGDLIYGQFVVANK 20 1 1 Unmodified _NRPNVQVGDLIYGQFVVANK_ 0 0 1 Q9NQT5 Q9NQT5 Q9NQT5 EXOSC3 Exosome complex component RRP40 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.7372 3 744.40256 2230.18585 70072.76 0.93156 0.00069346 0.46694 0.00034759 1.3985 0.001041 744.737651953186 750.744440124942 117.66 0.51466 117.66 117.46 117.98 7.6294E-06 105 22 8 0 0 0 0.0030402 1 69408 26.144 26.144 1 0.81328 0.68673 0 3147800 1449700 1698100 27017 2061 10181 10463 42323 42323 NRPNVQVGDLIYGQFVVANK 20 1 1 Unmodified _NRPNVQVGDLIYGQFVVANK_ 0 0 1 Q9NQT5 Q9NQT5 Q9NQT5 EXOSC3 Exosome complex component RRP40 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.7385 3 744.40256 2230.18585 69313.62 0.5725 0.00042617 0.64132 0.0004774 1.2138 0.00090357 744.737760150506 750.744479571822 117.42 0.39322 117.42 117.24 117.64 -7.6294E-06 84 17 7 0 0 0 0.060946 1 68304 13.455 13.455 1 0.87398 0.73278 0 5274100 2620300 2653900 27018 2061 10181 10463 42324 42324 NRPPLPAGTNSK 12 1 1 Unmodified _NRPPLPAGTNSK_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3548 2 626.343843 1250.67313 77274.24 0.57366 0.00035931 0.078431 4.9125E-05 0.65209 0.00040843 626.34385196628 635.354973011307 21.391 0.65976 21.391 21.141 21.801 0 165 34 8 0 0 0 7.9246E-37 2 7595 172.1 144.79 1 1.0212 1.2242 0 58796000 29344000 29452000 27019 334;1562 10182 10464 42325;42326 42325 NRPPLPAGTNSK 12 1 1 Unmodified _NRPPLPAGTNSK_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.8978 3 417.898321 1250.67313 93711.23 0.15513 6.4829E-05 0.26297 0.0001099 0.4181 0.00017473 417.897967259793 424.241341283575 21.409 0.41234 21.409 21.166 21.579 0 60 19 4 0 0 0 0.017307 1 7664 26.541 26.541 1 1.1292 1.235 0 9197800 5199400 3998400 27020 334;1562 10182 10464 42327 42327 NRPPLPAGTNSK 12 1 1 Unmodified _NRPPLPAGTNSK_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.3442 2 626.343843 1250.67313 76738.57 0.56883 0.00035629 -0.21041 -0.00013179 0.35843 0.0002245 626.343708826313 635.35487935958 21.252 0.53634 21.252 21.031 21.567 0 120 24 8 0 0 0 1.1853E-37 2 7376 186.74 152.53 1 1.0527 1.2432 0 139360000 67863000 71493000 27021 334;1562 10182 10464 42328;42329 42329 NRPPLPAGTNSK 12 1 1 Unmodified _NRPPLPAGTNSK_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.3445 2 626.343843 1250.67313 76544.3 0.31714 0.00019864 0.31964 0.0002002 0.63677 0.00039884 626.34401321866 635.355301141861 22.957 0.43577 22.957 22.753 23.189 0 100 17 10 0 0 0 2.8628E-07 2 7558 113.44 96.774 1 1.1442 0.99689 0 21144000 9743500 11400000 27022 334;1562 10182 10464 42330;42331 42331 NRPPLPAGTNSK 12 1 1 Unmodified _NRPPLPAGTNSK_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.3439 2 626.343843 1250.67313 75139.01 0.32047 0.00020072 0.17224 0.00010788 0.49271 0.00030861 626.343955682684 635.355128796102 22.822 0.53935 22.822 22.64 23.179 0 111 21 9 0 0 0 3.0526E-17 2 7019 144.55 112.68 1 1.1366 0.96395 0 18489000 8341100 10148000 27023 334;1562 10182 10464 42332;42333 42333 NRVPSAGDVEK 11 1 1 Unmodified _NRVPSAGDVEK_ 0 0 1 Q15785;B4DXU3 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.3191 2 586.306926 1170.5993 80829.59 0.39009 0.00022872 -0.15687 -9.1974E-05 0.23322 0.00013674 586.806898741251 595.318715222774 19.918 0.30733 19.918 19.736 20.043 0 30 10 4 0 0 0 0.010873 1 6410 63.073 29.277 1 1.2462 1.3376 0 12064000 4285400 7778400 27024 1765 10183 10465 42334 42334 NRVPSAGDVEK 11 1 1 Unmodified _NRVPSAGDVEK_ 0 0 1 Q15785;B4DXU3 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.317 2 586.306926 1170.5993 79001.38 0.068308 4.0049E-05 -0.26216 -0.00015371 -0.19385 -0.00011366 586.306709878213 595.318086716177 19.732 0.44351 19.732 19.421 19.865 0 55 20 5 0 0 0 0.0025231 2 6055 76.143 40.632 1 2.1935 2.4698 0 13750000 4126200 9623700 27025 1765 10183 10465 42335;42336 42335 NSADDEELTNDSLTLSQSK 19 1 0 Unmodified _NSADDEELTNDSLTLSQSK_ 0 0 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1038.4785 2 1033.97165 2065.92875 NaN NaN NaN 0.35933 0.00037154 NaN NaN NaN NaN 72.555 0.3051 72.555 72.402 72.707 0 0 0 0 0.00023113 3 42433 60.55 55.373 1 NaN NaN 0 4682800 0 4682800 27026 590 10184 10466 42337;42338;42339 42339 NSADDEELTNDSLTLSQSK 19 1 0 Unmodified _NSADDEELTNDSLTLSQSK_ 0 0 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1038.4806 2 1033.97165 2065.92875 NaN NaN NaN 1.0031 0.0010372 NaN NaN NaN NaN 71.581 0.15797 71.581 71.513 71.671 0 0 0 0 2.3727E-09 1 42939 82.55 75.006 1 NaN NaN 0 5104000 0 5104000 27027 590 10184 10466 42340 42340 NSAEAIIHGLSSLTACQLR 19 0 1 Unmodified _NSAEAIIHGLSSLTACQLR_ 0 0 0 A0A024R7X2;A0A024R7X1;P54274 A0A024R7X2 A0A024R7X2 TERF1 Telomeric repeat-binding factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.0214 3 681.021351 2040.04222 74719.32 0.82533 0.00056206 -0.42552 -0.00028979 0.39981 0.00027228 681.021125452911 684.691774949958 123.73 0.51759 123.73 123.63 124.15 0 74 21 6 0 0 0 1.2496E-05 1 74039 50.358 45.649 1 1.4691 1.2605 0 2717100 1220600 1496400 27028 236 10185 10467 42341 42341 NSAEAIIHGLSSLTACQLR 19 0 1 Unmodified _NSAEAIIHGLSSLTACQLR_ 0 0 0 A0A024R7X2;A0A024R7X1;P54274 A0A024R7X2 A0A024R7X2 TERF1 Telomeric repeat-binding factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.6921 3 681.021351 2040.04222 74328.25 0.82682 0.00056308 -0.53869 -0.00036686 0.28813 0.00019622 681.355825000225 684.691428721119 123.52 0.4537 123.52 123.26 123.71 7.6294E-06 54 18 7 0 0 0 5.1713E-06 1 72969 65.25 65.25 1 1.2199 1.0329 0 3035600 1394100 1641400 27029 236 10185 10467 42342 42342 NSAEEEVLSSEK 12 1 0 Unmodified _NSAEEEVLSSEK_ 0 0 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.317 2 661.309529 1320.6045 75536.7 0.46751 0.00030917 -0.078834 -5.2134E-05 0.38867 0.00025703 661.309565478419 665.316134197366 39.799 0.51898 39.799 39.618 40.137 0 158 42 7 0 0 0 4.9568E-23 2 20681 159.83 155.36 1 0.95445 0.97243 0 28074000 13761000 14313000 27030 590 10186 10468 42343;42344 42343 NSAEEEVLSSEK 12 1 0 Unmodified _NSAEEEVLSSEK_ 0 0 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.3176 2 661.309529 1320.6045 75827.35 0.36021 0.00023821 0.20216 0.00013369 0.56237 0.0003719 661.309509184504 665.316803887267 38.744 0.53368 38.744 38.592 39.126 0 160 46 6 0 0 0 4.6122E-08 1 20344 115 92.363 1 0.95508 1.028 0 37750000 18611000 19139000 27031 590 10186 10468 42345 42345 NSAEEEVLSSEK 12 1 0 Unmodified _NSAEEEVLSSEK_ 0 0 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.3097 2 661.309529 1320.6045 74654.38 0.44114 0.00029173 0.025364 1.6773E-05 0.46651 0.00030851 661.309340175247 665.316691929915 46.162 0.61241 46.162 45.852 46.464 0 220 45 7 0 0 0 0.0013223 2 22153 61.435 61.435 1 1.8358 1.4721 0 8255000 2856600 5398500 27032 590 10186 10468 42346;42347 42347 NSAEEEVLSSEK 12 1 0 Unmodified _NSAEEEVLSSEK_ 0 0 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.3168 2 661.309529 1320.6045 75578 0.35129 0.00023231 0.26159 0.00017299 0.61288 0.0004053 661.309419658225 665.316795201349 46.313 0.7948 46.313 46.016 46.81 0 230 49 8 0 0 0 0.0013223 2 21667 61.435 43.571 1 1.8614 1.5035 0 4325800 1312300 3013500 27033 590 10186 10468 42348;42349 42348 NSAELTVIK 9 1 0 Unmodified _NSAELTVIK_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.7882 2 487.779482 973.544411 87998.8 0.54465 0.00026567 1.3591 0.00066292 1.9037 0.00092859 487.779890209034 491.787387590551 49.668 0.29117 49.668 49.572 49.863 0 67 23 4 0 0 0 0.001292 2 28009 87.308 54.467 1 0.97832 1.0286 0 23923000 11245000 12678000 27034 1396 10187 10469 42350;42351 42351 NSAELTVIK 9 1 0 Unmodified _NSAELTVIK_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 491.7877 2 487.779482 973.544411 93983.77 0.1876 9.1506E-05 0.098331 4.7964E-05 0.28593 0.00013947 487.779422427289 491.78672948768 58.459 0.3377 58.459 58.277 58.614 0 71 24 5 0 0 0 0.043276 1 29741 40.724 17.653 1 1.5845 1.3267 0 1346800 549540 797230 27035 1396 10187 10469 42352 42352 NSAFESLYQDK 11 1 0 Unmodified _NSAFESLYQDK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3032 2 651.304049 1300.59355 75965.81 0.5426 0.0003534 -0.68702 -0.00044746 -0.14442 -9.4063E-05 651.303358017517 655.310870491704 66.695 1.1774 66.695 65.983 67.161 -7.6294E-06 299 94 5 0 0 0 2.1018E-05 2 38145 104.52 87.497 1 0.93747 0.91815 0 22065000 11584000 10481000 27036 1411 10188 10470 42353;42354 42353 NSAFESLYQDK 11 1 0 Unmodified _NSAFESLYQDK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3032 2 651.304049 1300.59355 75812.4 0.64384 0.00041934 -0.45599 -0.00029699 0.18785 0.00012235 651.303449243617 655.310810381108 65.611 1.2018 65.611 64.798 66 0 326 99 4 0 0 0 6.533E-11 3 38799 136.96 114.87 1 0.93022 0.96119 0 24982000 14068000 10914000 27037 1411 10188 10470 42355;42356;42357 42357 NSAFESLYQDK 11 1 0 Unmodified _NSAFESLYQDK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.3114 2 651.304049 1300.59355 76571.21 0.62317 0.00040587 -0.40397 -0.00026311 0.21921 0.00014277 651.303554069833 655.310958136454 76.549 0.78876 76.549 76.222 77.011 0 204 53 5 0 0 0 0.028006 2 40878 39.917 35.763 1 0.97556 0.77365 0 4402600 2346500 2056100 27038 1411 10188 10470 42358;42359 42359 NSAFESLYQDK 11 1 0 Unmodified _NSAFESLYQDK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.3102 2 651.304049 1300.59355 75001.45 0.55515 0.00036157 -0.072826 -4.7432E-05 0.48232 0.00031414 651.303704732938 655.311274988714 76.993 0.74326 76.993 76.649 77.393 0 205 48 6 0 0 0 0.0082766 2 40209 51.092 43.446 1 0.92845 0.75399 0 4447200 2262100 2185000 27039 1411 10188 10470 42360;42361 42361 NSAILSDPSVFSPLNK 16 1 0 Unmodified _NSAILSDPSVFSPLNK_ 0 0 0 Q03164;E9PR05;Q9UPD0;Q9Y6P1;Q86YP1;Q86YN9 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.4564 2 844.946327 1687.8781 65025.36 0.90474 0.00076446 -0.60247 -0.00050905 0.30227 0.0002554 844.944687298729 848.95336620724 119.7 0.37888 119.7 119.56 119.94 -7.6294E-06 82 19 6 0 0 0 0.0019975 1 70900 42.789 42.789 1 2.4701 1.956 0 4944100 1663900 3280300 27040 1680 10189 10471 42362 42362 NSAILSDPSVFSPLNK 16 1 0 Unmodified _NSAILSDPSVFSPLNK_ 0 0 0 Q03164;E9PR05;Q9UPD0;Q9Y6P1;Q86YP1;Q86YN9 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.9551 2 844.946327 1687.8781 NaN NaN NaN 0.042148 3.5613E-05 NaN NaN NaN NaN 119.5 0.4055 119.5 119.34 119.74 -7.6294E-06 0 0 0 0.00019313 1 69859 72.089 58.183 1 NaN NaN 0 3261300 0 3261300 27041 1680 10189 10471 42363 42363 NSASATTPLSGNSSR 15 0 1 Unmodified _NSASATTPLSGNSSR_ 0 0 0 C9JSU1;A0A1S5UZ17;A0A024R2K4;Q9Y608 C9JSU1 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.356 2 725.350051 1448.68555 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.074 1 25.074 24.574 25.574 -1.9073E-06 0 0 0 0.00020046 1 10727 85.845 71.166 1 27042 114 10190 10472 42364 42364 NSAVETVEQELLFVGSETGK 20 1 0 Unmodified _NSAVETVEQELLFVGSETGK_ 0 0 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1069.5374 2 1069.0366 2136.05864 60418.05 0.52462 0.00056083 -0.93082 -0.00099508 -0.4062 -0.00043425 1069.53729279354 1073.04361723185 127.49 0.45387 127.49 127.27 127.72 0 132 26 7 0 0 0 1.2873E-12 3 85167 100.41 100.41 1 0.91622 0.94702 0 11414000 5877100 5537400 27043 2126 10191 10473 42365;42366;42367 42365 NSDEADLVPAK 11 1 0 Unmodified _NSDEADLVPAK_ 0 0 0 B5MD17;J3KS05;Q6IBN6;P83916 B5MD17 B5MD17 CBX1 Chromobox protein homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.7918 2 579.785492 1157.55643 77640.73 0.54933 0.00031849 0.95425 0.00055326 1.5036 0.00087176 579.785711552173 583.792482546069 40.367 0.72366 40.367 40.061 40.785 0 315 63 9 0 0 0 7.8265E-10 2 21001 125.66 109.45 1 1.4377 1.6214 0 130690000 54299000 76394000 27044 1081 10192 10474 42368;42369 42368 NSDEADLVPAK 11 1 0 Unmodified _NSDEADLVPAK_ 0 0 0 B5MD17;J3KS05;Q6IBN6;P83916 B5MD17 B5MD17 CBX1 Chromobox protein homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.7925 2 579.785492 1157.55643 78386.76 0.67857 0.00039342 0.6511 0.0003775 1.3297 0.00077092 579.785633129942 583.792458709836 39.349 0.71967 39.349 39.064 39.783 -3.8147E-06 274 61 9 0 0 0 4.6762E-17 3 20799 159.11 135.16 1 1.311 1.4918 0 146960000 59603000 87361000 27045 1081 10192 10474 42370;42371;42372 42370 NSDLLTSPDVGLLK 14 1 0 Unmodified _NSDLLTSPDVGLLK_ 0 0 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.4099 2 736.403763 1470.79297 75457.3 0.85374 0.0006287 -0.10277 -7.5682E-05 0.75097 0.00055302 736.905482744029 740.410274488289 106.52 0.51789 106.52 106.21 106.73 0 135 37 6 0 0 0 0.001905 1 66117 50.354 44.382 1 1.4095 1.4448 0 10591000 5232300 5358600 27046 1447 10193 10475 42373 42373 NSDLLTSPDVGLLK 14 1 0 Unmodified _NSDLLTSPDVGLLK_ 0 0 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.3522 2 736.403763 1470.79297 74964.14 0.9189 0.00067668 0.22875 0.00016845 1.1476 0.00084513 736.403992765857 740.410828203352 105.94 0.5151 105.94 105.67 106.18 0 114 39 4 0 0 0 0.016819 1 67296 54.524 47.385 1 1.4006 1.399 0 15154000 7713700 7440700 27047 1447 10193 10475 42374 42374 NSDLLTSPDVGLLK 14 1 0 Unmodified _NSDLLTSPDVGLLK_ 0 0 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.4045 2 736.403763 1470.79297 71900.3 0.93053 0.00068525 0.32248 0.00023748 1.253 0.00092273 736.404439012156 740.410843160547 117.97 0.40926 117.97 117.75 118.16 0 73 17 5 0 0 0 0.00024976 2 69556 62.258 55.875 1 0.8769 0.69367 0 6186900 3181900 3005000 27048 1447 10193 10475 42375;42376 42376 NSDLLTSPDVGLLK 14 1 0 Unmodified _NSDLLTSPDVGLLK_ 0 0 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 736.4054 2 736.403763 1470.79297 72084.82 0.58765 0.00043275 0.78244 0.00057619 1.3701 0.0010089 736.40510282773 740.912747901578 117.77 0.42353 117.77 117.56 117.98 0 97 20 6 0 0 0 0.00024976 2 68519 62.258 56.018 1 0.77077 0.62863 0 4651600 2242200 2409400 27049 1447 10193 10475 42377;42378 42377 NSEDDGVVMTFSSVK 15 1 0 Oxidation (M) _NSEDDGVVM(ox)TFSSVK_ NSEDDGVVM(1)TFSSVK NSEDDGVVM(98.94)TFSSVK 0 1 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.8725 2 815.866885 1629.71922 70499.54 0.67151 0.00054786 -0.17423 -0.00014215 0.49728 0.00040571 815.866659643498 819.873540822522 72.043 0.49164 72.043 71.848 72.34 0 89 37 6 0 0 0 1.0172E-06 1 42070 98.942 90.717 1 1.2493 1.2298 0 8619100 3657500 4961600 27050 2080 10194 10476 42379 42379 1914 NSEDDGVVMTFSSVK 15 1 0 Oxidation (M) _NSEDDGVVM(ox)TFSSVK_ NSEDDGVVM(1)TFSSVK NSEDDGVVM(84.89)TFSSVK 0 1 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.8739 2 815.866885 1629.71922 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.801 1 72.801 72.301 73.301 0 0 0 0 0.0001012 1 42675 84.892 70.473 1 27051 2080 10194 10476 42380 42380 1914 NSEDDGVVMTFSSVK 15 1 0 Oxidation (M) _NSEDDGVVM(ox)TFSSVK_ NSEDDGVVM(1)TFSSVK NSEDDGVVM(65.56)TFSSVK 0 1 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.8755 2 815.866885 1629.71922 70120.86 0.65372 0.00053335 -0.21278 -0.0001736 0.44094 0.00035975 816.368481398658 819.873742280205 70.97 0.41856 70.97 70.748 71.167 0 93 30 4 0 0 0 0.00010716 2 42332 65.563 55.609 1 1.3356 1.3486 0 8241000 3857200 4383900 27052 2080 10194 10476 42381;42382 42381 1914 NSEDDGVVMTFSSVK 15 1 0 Oxidation (M) _NSEDDGVVM(ox)TFSSVK_ NSEDDGVVM(1)TFSSVK NSEDDGVVM(91.86)TFSSVK 0 1 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.8745 2 815.866885 1629.71922 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.572 1 71.572 71.072 72.072 0 0 0 0 3.3409E-05 1 42920 91.858 79.644 1 27053 2080 10194 10476 42383 42383 1914 NSEDDGVVMTFSSVK 15 1 0 Oxidation (M) _NSEDDGVVM(ox)TFSSVK_ NSEDDGVVM(1)TFSSVK NSEDDGVVM(143.42)TFSSVK 0 1 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.8745 2 815.866885 1629.71922 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.607 1 71.607 71.107 72.107 0 0 0 0 7.7431E-26 1 42949 143.42 124.18 1 27054 2080 10194 10476 42384 42384 1914 NSELLVVSAR 10 0 1 Unmodified _NSELLVVSAR_ 0 0 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.3136 2 544.308938 1086.60332 82571.95 0.43845 0.00023865 0.12462 6.7832E-05 0.56308 0.00030649 544.30874550331 549.313120189932 67.17 0.88518 67.17 66.806 67.691 0 211 70 4 0 0 0 0.00031979 1 38632 90.15 62.847 1 1.0488 1.121 0 44906000 22492000 22414000 27055 790 10195 10477 42385 42385 NSEPAGLETPEAK 13 1 0 Unmodified _NSEPAGLETPEAK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.33 2 671.827889 1341.64122 74019.41 0.74583 0.00050107 -0.030827 -2.071E-05 0.715 0.00048036 671.828289434 675.834631368038 37.122 0.82462 37.122 36.613 37.438 0 260 64 7 0 0 0 0.031658 1 19092 33.229 26.924 1 3.164 3.5022 0 45602000 12172000 33430000 27056 1454 10196 10478 42386 42386 NSEPAGLETPEAK 13 1 0 Unmodified _NSEPAGLETPEAK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.8351 2 671.827889 1341.64122 74096.71 0.55735 0.00037444 0.6831 0.00045893 1.2405 0.00083337 671.829094332414 675.835057697831 43.483 0.69451 43.483 43.075 43.769 0 206 45 6 0 0 0 0.00014979 1 20506 88.441 88.441 1 1.3579 1.077 0 4570500 1965400 2605200 27057 1454 10196 10478 42387 42387 NSEPAGLETPEAK 13 1 0 Unmodified _NSEPAGLETPEAK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.837 2 671.827889 1341.64122 74263.54 0.44766 0.00030075 0.92676 0.00062262 1.3744 0.00092337 671.829266427092 675.835159800739 43.625 0.61586 43.625 43.292 43.908 3.8147E-06 189 40 6 0 0 0 0.016821 1 19950 36.447 35.195 1 1.1154 0.89592 0 4223400 1593700 2629800 27058 1454 10196 10478 42388 42388 NSEPEEVIPSR 11 0 1 Unmodified _NSEPEEVIPSR_ 0 0 0 A0A0S2Z4R1;P54577 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8147 2 628.809499 1255.60444 NaN NaN NaN -0.09406 -5.9146E-05 NaN NaN NaN NaN 43.976 0.59738 43.976 43.652 44.249 0 0 0 0 0.012153 1 23512 56.404 41.642 1 NaN NaN 0 13097000 0 13097000 27059 567 10197 10479 42389 42389 NSEPEEVIPSR 11 0 1 Unmodified _NSEPEEVIPSR_ 0 0 0 A0A0S2Z4R1;P54577 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8144 2 628.809499 1255.60444 77811.05 1.0611 0.00066723 -0.43675 -0.00027463 0.62435 0.0003926 628.809553638041 633.813730442264 43.297 0.5806 43.297 43.022 43.603 3.8147E-06 209 39 9 0 0 0 0.0001538 2 23376 94.804 85.59 1 3.3658 3.7587 0 44358000 9625600 34732000 27060 567 10197 10479 42390;42391 42390 NSGELEATSAFLASGQR 17 0 1 Unmodified _NSGELEATSAFLASGQR_ 0 0 0 Q9NYB0 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.424 2 869.423747 1736.83294 NaN NaN NaN 1.4083 0.0012244 NaN NaN NaN NaN 85.461 0.30293 85.461 85.277 85.58 0 0 0 0 0.0095608 1 51263 43.761 35.032 1 NaN NaN 0 5673000 5673000 0 27061 2082 10198 10480 42392 42392 NSGELEATSAFLASGQR 17 0 1 Unmodified _NSGELEATSAFLASGQR_ 0 0 0 Q9NYB0 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.9252 2 869.423747 1736.83294 NaN NaN NaN 0.47607 0.00041391 NaN NaN NaN NaN 84.57 0.35846 84.57 84.353 84.712 0 0 0 0 3.6911E-05 1 51895 76.262 67.073 1 NaN NaN 0 5386100 5386100 0 27062 2082 10198 10480 42393 42393 NSGLVSITSR 10 0 1 Unmodified _NSGLVSITSR_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2892 2 517.285463 1032.55637 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.48 1 50.48 49.98 50.98 -3.8147E-06 0 0 0 0.00022517 1 27865 78.655 62.452 1 27063 1070 10199 10481 42394 42394 NSGPLGTEMNTGFSSEVK 18 1 0 Oxidation (M) _NSGPLGTEM(ox)NTGFSSEVK_ NSGPLGTEM(1)NTGFSSEVK NSGPLGTEM(65.22)NTGFSSEVK 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 939.9371 2 935.928005 1869.84146 NaN NaN NaN 0.089991 8.4225E-05 NaN NaN NaN NaN 64.087 0.36016 64.087 63.939 64.299 0 0 0 0 4.8416E-05 1 37807 65.219 56.264 1 NaN NaN 0 6186000 0 6186000 27064 619 10200 10482 42395 42395 475 NSGPLGTEMNTGFSSEVK 18 1 0 Oxidation (M) _NSGPLGTEM(ox)NTGFSSEVK_ NSGPLGTEM(1)NTGFSSEVK NSGPLGTEM(65.47)NTGFSSEVK 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 935.9292 2 935.928005 1869.84146 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.986 1 63.986 63.486 64.486 0 0 0 0 8.1874E-05 1 37641 65.472 50.785 1 27065 619 10200 10482 42396 42396 475 NSHCAQTVSSVFK 13 1 0 Unmodified _NSHCAQTVSSVFK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.3594 2 732.848632 1463.68271 70676.29 0.79134 0.00057993 0.39245 0.00028761 1.1838 0.00086754 732.848829913362 736.856180677325 37.223 0.39645 37.223 36.94 37.336 0 124 35 5 0 0 0 0.005864 2 18824 46.844 46.844 1 0.87188 0.90164 0 29185000 14245000 14940000 27066 897 10201 10483 42397;42398 42398 NSHCAQTVSSVFK 13 1 0 Unmodified _NSHCAQTVSSVFK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.8504 2 732.848632 1463.68271 72196.55 1.4764 0.001082 0.40754 0.00029867 1.884 0.0013807 732.848974183743 737.357849625964 35.572 0.47731 35.572 35.242 35.719 0 94 44 4 0 0 0 2.1706E-13 1 18151 128.68 119.24 1 0.59338 0.59968 0 8610000 5351100 3258900 27067 897 10201 10483 42399 42399 NSHCAQTVSSVFK 13 1 0 Unmodified _NSHCAQTVSSVFK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.8579 2 732.848632 1463.68271 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.407 1 35.407 34.907 35.907 3.8147E-06 0 0 0 2.6581E-16 1 18060 124.42 99.2 1 27068 897 10201 10483 42400 42400 NSHCAQTVSSVFK 13 1 0 Unmodified _NSHCAQTVSSVFK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.9019 3 488.901514 1463.68271 84343.91 0.13513 6.6064E-05 0.18607 9.0971E-05 0.3212 0.00015703 488.901591583803 491.572927654818 42.075 0.58056 42.075 41.802 42.382 0 228 45 6 0 0 0 0.011262 2 19609 22.855 22.855 1 1.1709 0.92592 0 5103800 2282200 2821600 27069 897 10201 10483 42401;42402 42402 NSHCAQTVSSVFK 13 1 0 Unmodified _NSHCAQTVSSVFK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.5734 3 488.901514 1463.68271 86024.63 -0.030219 -1.4774E-05 0.29685 0.00014513 0.26664 0.00013036 488.901644222686 491.573116758434 41.815 0.63206 41.815 41.559 42.191 0 247 48 7 0 0 0 0.020428 1 18872 17.867 17.867 1 1.2301 0.96935 0 3885100 1701300 2183700 27070 897 10201 10483 42403 42403 NSILDQYGK 9 1 0 Unmodified _NSILDQYGK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.274 2 519.266739 1036.51892 83035.16 0.14182 7.3644E-05 -0.3492 -0.00018133 -0.20738 -0.00010769 519.266313658102 523.273819015613 59.725 0.82185 59.725 59.365 60.187 0 272 56 8 0 0 0 0.00048607 2 30465 98.582 71.793 1 2.3889 1.9057 0 9454400 2935000 6519300 27071 1945 10202 10484 42404;42405 42404 NSILDQYGK 9 1 0 Unmodified _NSILDQYGK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.274 2 519.266739 1036.51892 84428.17 0.2202 0.00011434 -0.4923 -0.00025564 -0.27211 -0.0001413 519.266302250154 523.273693237531 60.2 0.73417 60.2 59.902 60.637 0 179 54 5 0 0 0 0.0025747 2 30098 73.985 57.306 1 2.6201 2.1487 0 8859600 2578400 6281200 27072 1945 10202 10484 42406;42407 42406 NSIPLQLPVEALQK 14 1 0 Unmodified _NSIPLQLPVEALQK_ 0 0 0 Q71RB6;Q8N531 Q71RB6 Q71RB6 FBXL6 F-box/LRR-repeat protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 779.4578 2 775.451048 1548.88754 68856.33 1.0533 0.00081681 -0.39254 -0.00030439 0.6608 0.00051242 775.451161089637 779.457752921905 126.32 0.59976 126.32 126.1 126.7 0 101 20 8 0 0 0 0.033259 1 76118 30.205 30.205 1 1.443 1.1214 0 3622600 1567600 2054900 27073 1867 10203 10485 42408 42408 NSIPLQLPVEALQK 14 1 0 Unmodified _NSIPLQLPVEALQK_ 0 0 0 Q71RB6;Q8N531 Q71RB6 Q71RB6 FBXL6 F-box/LRR-repeat protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 779.9614 2 775.451048 1548.88754 70135.63 0.75417 0.00058483 -0.095663 -7.4182E-05 0.65851 0.00051064 775.450768910682 779.458269657015 126.23 0.62393 126.23 125.92 126.55 -7.6294E-06 130 27 8 0 0 0 0.023552 2 74881 32.946 32.946 1 1.6573 1.3302 0 4210700 1697200 2513500 27074 1867 10203 10485 42409;42410 42409 NSIQFTDGYEVK 12 1 0 Unmodified _NSIQFTDGYEVK_ 0 0 0 B4DKZ2;B4DG22;B7ZB17;P51812;Q7Z2J4 B4DKZ2 B4DKZ2 RPS6KA3 Ribosomal protein S6 kinase alpha-3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.8454 2 700.838256 1399.66196 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.239 1 71.239 70.739 71.739 0 0 0 0 0.021729 1 41563 50.452 29.581 1 27075 971 10204 10486 42411 42411 NSITHGSFSGSLQGYPSSGAK 21 1 0 Unmodified _NSITHGSFSGSLQGYPSSGAK_ 0 0 0 Q13129;Q59GL0 Q13129 Q13129 RLF Zinc finger protein Rlf MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.6669 3 694.667742 2080.9814 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.696 1 54.696 54.196 55.196 3.8147E-06 0 0 0 0.015893 1 31289 36.253 26.331 1 27076 1705 10205 10487 42412 42412 NSITHGSFSGSLQGYPSSGAK 21 1 0 Unmodified _NSITHGSFSGSLQGYPSSGAK_ 0 0 0 Q13129;Q59GL0 Q13129 Q13129 RLF Zinc finger protein Rlf MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.675 3 694.667742 2080.9814 72960.17 0.64267 0.00044644 0.077791 5.4039E-05 0.72046 0.00050048 694.667954439781 697.339318691473 65.789 0.45496 65.789 65.53 65.985 0 179 34 7 0 0 0 0.038385 1 34047 13.475 4.6556 1 1.7588 1.3645 0 3477100 1222700 2254400 27077 1705 10205 10487 42413 42413 NSITHGSFSGSLQGYPSSGAK 21 1 0 Unmodified _NSITHGSFSGSLQGYPSSGAK_ 0 0 0 Q13129;Q59GL0 Q13129 Q13129 RLF Zinc finger protein Rlf MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 697.6747 3 694.667742 2080.9814 74398.92 0.40385 0.00028054 0.39734 0.00027602 0.80119 0.00055656 694.667969705166 697.339538145332 66.239 0.42017 66.239 66.026 66.447 0 138 29 6 0 0 0 0.030885 1 33563 15.699 12.038 1 1.6814 1.3627 0 2696300 1082800 1613400 27078 1705 10205 10487 42414 42414 NSITSYFGAAGR 12 0 1 Unmodified _NSITSYFGAAGR_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.6743 2 622.306926 1242.5993 77505.34 0.70521 0.00043885 0.10463 6.5113E-05 0.80984 0.00050397 622.306671404743 627.311264160192 78.065 0.6296 78.065 77.749 78.378 -7.6294E-06 159 50 5 0 0 0 0.010379 1 46218 64.374 48.236 1 1.2543 1.2882 0 25593000 11967000 13627000 27079 2143 10206 10488 42415 42415 NSITSYFGAAGR 12 0 1 Unmodified _NSITSYFGAAGR_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3117 2 622.306926 1242.5993 79548.91 0.39874 0.00024814 0.056765 3.5325E-05 0.4555 0.00028346 622.306558844584 627.311185849519 77.014 0.61115 77.014 76.697 77.308 7.6294E-06 209 50 6 0 0 0 0.00022516 1 46455 83.862 57.348 1 1.1677 1.2729 0 29479000 13054000 16425000 27080 2143 10206 10488 42416 42416 NSLEDLTAEDFR 12 0 1 Unmodified _NSLEDLTAEDFR_ 0 0 0 E7EMW7;O95071;E7ET84;B3KML2 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3353 2 705.330795 1408.64704 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.765 1 89.765 89.265 90.265 0 0 0 0 0.0011794 1 54189 71.03 38.424 1 27081 1218 10207 10489 42417 42417 NSLEDLTAEDFR 12 0 1 Unmodified _NSLEDLTAEDFR_ 0 0 0 E7EMW7;O95071;E7ET84;B3KML2 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.3378 2 705.330795 1408.64704 NaN NaN NaN 0.26774 0.00018885 NaN NaN NaN NaN 88.861 0.28767 88.861 88.746 89.034 0 0 0 0 0.00051216 1 54795 88.155 56.724 1 NaN NaN 0 6226700 0 6226700 27082 1218 10207 10489 42418 42418 NSLEFFTMLAQR 12 0 1 Oxidation (M) _NSLEFFTM(ox)LAQR_ NSLEFFTM(1)LAQR NSLEFFTM(72.85)LAQR 0 1 0 A0A024R2Z6 A0A024R2Z6 A0A024R2Z6 GNL3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.8693 2 736.863751 1471.71295 70046.13 0.83847 0.00061784 0.035597 2.623E-05 0.87407 0.00064407 736.863913848485 741.868512023354 124.17 0.88957 124.17 123.73 124.62 7.6294E-06 159 36 8 0 0 0 0.00015133 2 74121 72.848 61.628 1 0.81069 0.69422 0 6033000 3276300 2756600 27083 125 10208 10490 42419;42420 42419 110 NSLEFFTMLAQR 12 0 1 Oxidation (M) _NSLEFFTM(ox)LAQR_ NSLEFFTM(1)LAQR NSLEFFTM(70.94)LAQR 0 1 0 A0A024R2Z6 A0A024R2Z6 A0A024R2Z6 GNL3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 736.865 2 736.863751 1471.71295 69783.58 0.8266 0.00060909 0.4617 0.00034021 1.2883 0.0009493 736.863871631921 741.868576552326 124.02 0.86024 124.02 123.51 124.37 0 117 33 6 0 0 0 0.00021367 2 73096 70.942 70.942 1 0.83269 0.68771 0 8167500 4526800 3640600 27084 125 10208 10490 42421;42422 42422 110 NSLEFFTMLAQR 12 0 1 Unmodified _NSLEFFTMLAQR_ 0 0 0 A0A024R2Z6 A0A024R2Z6 A0A024R2Z6 GNL3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.8696 2 728.866294 1455.71803 70815.95 0.99741 0.00072698 -0.14988 -0.00010925 0.84752 0.00061773 728.866480843905 733.869986363624 133.96 0.35721 133.96 133.77 134.12 0 69 14 8 0 0 0 0.00020664 1 81616 80.102 62.282 1 1.089 0.92061 0 4881300 2684400 2196900 27085 125 10208 10491 42423 42423 NSLEILLGSIGR 12 0 1 Unmodified _NSLEILLGSIGR_ 0 0 0 R4GNF2;H0Y4E5;Q9UBI1 R4GNF2 R4GNF2 COMMD3 COMM domain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.373 2 636.369527 1270.7245 79133.87 0.79355 0.00050499 0.72464 0.00046114 1.5182 0.00096613 636.872497820209 641.373996406664 120.16 0.26787 120.16 120.1 120.37 -7.6294E-06 33 18 4 0 0 0 0.00016578 1 77517 91.937 77.271 1 2.8574 3.0873 0 2468600 483670 1985000 27086 1281 10209 10492 42424 42424 NSLEILLGSIGR 12 0 1 Unmodified _NSLEILLGSIGR_ 0 0 0 R4GNF2;H0Y4E5;Q9UBI1 R4GNF2 R4GNF2 COMMD3 COMM domain-containing protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3741 2 636.369527 1270.7245 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.7 1 119.7 119.2 120.2 -7.6294E-06 0 0 0 0.0039582 1 78967 65.842 44.378 1 27087 1281 10209 10492 42425 42425 NSLESYAFNMK 11 1 0 Oxidation (M) _NSLESYAFNM(ox)K_ NSLESYAFNM(1)K NSLESYAFNM(136.57)K 0 1 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96H53;E9PS65;Q96BE0;Q9NZ87;Q9NWW3;E9PM13 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.3085 2 660.300452 1318.58635 74510.23 0.59588 0.00039346 0.62138 0.0004103 1.2173 0.00080376 660.300787560929 664.308117468943 63.281 1.6489 63.281 62.524 64.173 3.8147E-06 524 158 7 0 0 0 4.3707E-11 3 36225 136.57 127.38 1 1.8393 2.017 0 52988000 20289000 32699000 27088 1467 10210 10493 42426;42427;42428 42427 1181 NSLESYAFNMK 11 1 0 Oxidation (M) _NSLESYAFNM(ox)K_ NSLESYAFNM(1)K NSLESYAFNM(123.21)K 0 1 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96H53;E9PS65;Q96BE0;Q9NZ87;Q9NWW3;E9PM13 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3079 2 660.300452 1318.58635 73670.59 0.57804 0.00038168 0.14163 9.3521E-05 0.71968 0.0004752 660.300533640407 664.307740713444 62.281 1.1034 62.281 61.767 62.87 3.8147E-06 503 102 7 0 0 0 6.7688E-09 2 36433 123.21 112.06 1 1.8731 2.068 0 44288000 17325000 26963000 27089 1467 10210 10493 42429;42430 42430 1181 NSLESYAFNMK 11 1 0 Oxidation (M) _NSLESYAFNM(ox)K_ NSLESYAFNM(1)K NSLESYAFNM(61.16)K 0 1 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96H53;E9PS65;Q96BE0;Q9NZ87;Q9NWW3;E9PM13 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.3008 2 660.300452 1318.58635 73133.88 0.65769 0.00043428 0.90127 0.00059511 1.559 0.0010294 660.301078707382 664.308320239069 73.436 0.91965 73.436 72.934 73.854 0 316 66 6 0 0 0 0.0013056 1 38813 61.161 55.621 1 0.98 0.77395 0 5268100 2039900 3228200 27090 1467 10210 10493 42431 42431 1181 NSLESYAFNMK 11 1 0 Oxidation (M) _NSLESYAFNM(ox)K_ NSLESYAFNM(1)K NSLESYAFNM(56.01)K 0 1 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96H53;E9PS65;Q96BE0;Q9NZ87;Q9NWW3;E9PM13 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 660.3014 2 660.300452 1318.58635 73610.6 0.54619 0.00036065 0.69745 0.00046053 1.2436 0.00082118 660.301068096304 664.308051818645 74.015 0.93342 74.015 73.526 74.46 -7.6294E-06 288 66 6 0 0 0 0.0026881 1 38359 56.013 51.996 1 0.95495 0.7817 0 4884600 2486100 2398500 27091 1467 10210 10493 42432 42432 1181 NSLESYAFNMK 11 1 0 Unmodified _NSLESYAFNMK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96H53;E9PS65;Q96BE0;Q9NZ87;Q9NWW3;E9PM13 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.311 2 652.302995 1302.59144 NaN NaN NaN -0.2025 -0.00013209 NaN NaN NaN NaN 95.068 0.43346 95.068 94.89 95.323 0 0 0 0 0.0027646 1 53233 71.451 59.603 1 NaN NaN 0 1879600 0 1879600 27092 1467 10210 10494 42433 42433 NSLESYAFNMK 11 1 0 Unmodified _NSLESYAFNMK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96H53;E9PS65;Q96BE0;Q9NZ87;Q9NWW3;E9PM13 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.3024 2 652.302995 1302.59144 76877.67 0.60759 0.00039633 -0.73577 -0.00047995 -0.12818 -8.3613E-05 652.301728462587 656.309446480496 95.061 0.60253 95.061 94.718 95.32 7.6294E-06 113 40 5 0 0 0 0.014477 1 52475 46.819 45.011 1 1.8014 1.4569 0 2572600 888550 1684000 27093 1467 10210 10494 42434 42434 NSLISSLEEEVSILNR 16 0 1 Unmodified _NSLISSLEEEVSILNR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.979 2 901.978355 1801.94216 64104.12 0.94 0.00084786 -0.071355 -6.4361E-05 0.86864 0.0007835 901.977874525212 906.982529254157 133.09 0.51918 133.09 132.83 133.35 0 101 18 8 0 0 0 1.7594E-24 3 87024 138.42 108.36 1 0.79985 0.82224 0 19528000 10933000 8595200 27094 186;1747 10211 10495 42435;42436;42437 42437 NSLISSLEEEVSILNR 16 0 1 Unmodified _NSLISSLEEEVSILNR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 907.4836 2 901.978355 1801.94216 64523.99 0.92157 0.00083123 0.17381 0.00015677 1.0954 0.00098801 901.978205698613 906.982771446448 132.68 0.84772 132.68 132.18 133.03 0 221 48 8 0 0 0 5.001E-09 2 88852 109.84 95.158 1 0.77965 0.85129 0 38911000 21030000 17881000 27095 186;1747 10211 10495 42438;42439 42439 NSLLAGGDDDTMSVISGISSR 21 0 1 Oxidation (M) _NSLLAGGDDDTM(ox)SVISGISSR_ NSLLAGGDDDTM(1)SVISGISSR NSLLAGGDDDTM(42.57)SVISGISSR 0 1 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;Q6AI02;B4DQ46 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2;DKFZp686P168 Cohesin subunit SA-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1061.502 2 1055.99969 2109.98483 NaN NaN NaN 1.8786 0.0019838 NaN NaN NaN NaN 98.473 0.19093 98.473 98.386 98.577 0 0 0 0 0.0002178 1 60156 42.568 35.024 1 NaN NaN 0 3838500 0 3838500 27096 863 10212 10496 42440 42440 676 NSLLAGGDDDTMSVISGISSR 21 0 1 Oxidation (M) _NSLLAGGDDDTM(ox)SVISGISSR_ NSLLAGGDDDTM(1)SVISGISSR NSLLAGGDDDTM(40.02)SVISGISSR 0 1 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;Q6AI02;B4DQ46 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2;DKFZp686P168 Cohesin subunit SA-2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.9993 2 1055.99969 2109.98483 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.475 1 98.475 97.975 98.975 7.6294E-06 0 0 0 0.0081344 1 60202 40.025 27.257 1 27097 863 10212 10496 42441 42441 676 NSLLSLSDT 9 0 0 Unmodified _NSLLSLSDT_ 0 0 0 Q7L2H7 Q7L2H7 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 949.4854 1 949.483667 948.476391 NaN NaN NaN -0.48945 -0.00046472 NaN NaN NaN NaN 98.561 0.4053 98.561 98.437 98.843 0 0 0 0 0.0021945 1 60324 86.833 58.615 1 27098 1872 10213 10497 42442 42442 NSLPDALLPNLLDR 14 0 1 Unmodified _NSLPDALLPNLLDR_ 0 0 0 Q96N67;A0A0C4DGY6;A0A1B0GVW2;A0A1B0GUE9 Q96N67 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.938 2 775.93048 1549.84641 71173.71 0.91283 0.00070829 0.50042 0.00038829 1.4132 0.0010966 775.930347688615 780.935532900711 123.87 0.42866 123.87 123.69 124.12 0 101 30 5 0 0 0 0.0014549 2 80364 57.019 53.569 1 1.2293 1.2637 0 6400500 2657600 3742900 27099 1981 10214 10498 42443;42444 42444 NSLPDALLPNLLDR 14 0 1 Unmodified _NSLPDALLPNLLDR_ 0 0 0 Q96N67;A0A0C4DGY6;A0A1B0GVW2;A0A1B0GUE9 Q96N67 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.937 2 775.93048 1549.84641 NaN NaN NaN 1.6898 0.0013111 NaN NaN NaN NaN 123.44 0.33365 123.44 123.29 123.62 -7.6294E-06 0 0 0 0.0078008 1 81977 53.569 38.192 1 NaN NaN 0 3355800 0 3355800 27100 1981 10214 10498 42445 42445 NSLPDALLPNLLDR 14 0 1 Unmodified _NSLPDALLPNLLDR_ 0 0 0 Q96N67;A0A0C4DGY6;A0A1B0GVW2;A0A1B0GUE9 Q96N67 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.4326 2 775.93048 1549.84641 NaN NaN NaN 0.092735 7.1956E-05 NaN NaN NaN NaN 123.46 0.3478 123.46 123.29 123.64 -7.6294E-06 0 0 0 0.016025 1 81983 48.004 31.372 1 NaN NaN 0 2010500 2010500 0 27101 1981 10214 10498 42446 42446 NSLPDTVQIR 10 0 1 Unmodified _NSLPDTVQIR_ 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.8121 2 571.811845 1141.60914 79982.37 0.51396 0.00029389 0.0012075 6.9046E-07 0.51517 0.00029458 571.811844711898 576.815917633311 62.996 1.216 62.996 62.451 63.667 0 655 118 8 0 0 0 8.1742E-06 2 36001 106.6 72.511 1 0.82936 0.9673 0 193990000 109850000 84144000 27102 1619 10215 10499 42447;42448 42447 NSLPDTVQIR 10 0 1 Unmodified _NSLPDTVQIR_ 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.8121 2 571.811845 1141.60914 78713.4 0.62614 0.00035803 0.23047 0.00013178 0.8566 0.00048982 571.81185265756 576.815930512328 61.829 1.4213 61.829 61.263 62.684 -3.8147E-06 644 131 7 0 0 0 2.8741E-08 2 36041 120.12 78.01 1 0.78852 0.91101 0 253410000 139890000 113520000 27103 1619 10215 10499 42449;42450 42450 NSLPDTVQIR 10 0 1 Unmodified _NSLPDTVQIR_ 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.8123 2 571.811845 1141.60914 79646.5 0.44097 0.00025215 0.37516 0.00021452 0.81612 0.00046667 571.812027264025 576.816041839245 72.657 1.4785 72.657 72.22 73.699 0 494 108 10 0 0 0 0.0010745 2 38262 76.605 51.661 1 1.1358 0.97818 0 59640000 28008000 31632000 27104 1619 10215 10499 42451;42452 42452 NSLPDTVQIR 10 0 1 Unmodified _NSLPDTVQIR_ 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.8121 2 571.811845 1141.60914 78222.34 0.37667 0.00021539 0.54014 0.00030886 0.91681 0.00052424 571.811986689332 576.815992063055 73.065 1.5024 73.065 72.655 74.157 0 606 111 10 0 0 0 1.6847E-08 2 37751 122.52 76.091 1 1.0755 0.93836 0 51672000 23699000 27973000 27105 1619 10215 10499 42453;42454 42454 NSLQEQQEEEEEARK 15 1 1 Unmodified _NSLQEQQEEEEEARK_ 0 0 1 P35580 P35580 P35580 MYH10 Myosin-10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.2925 3 616.285298 1845.83406 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.521 1 19.521 19.021 20.021 0 0 0 0 0.0043271 1 6150 48.323 39.276 1 27106 1544 10216 10500 42455 42455 NSNLEIPDTLQELFAR 16 0 1 Unmodified _NSNLEIPDTLQELFAR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 930.4807 2 930.478522 1858.94249 61594.14 0.94345 0.00087786 -0.88327 -0.00082187 0.060177 5.5993E-05 930.477664865741 935.482692963277 130.08 0.90427 130.08 129.81 130.71 0 260 53 7 0 0 0 0.00015275 1 85058 66.498 57.985 1 0.81265 0.8238 0 18099000 12889000 5209900 27107 1699 10217 10501 42456 42456 NSNLEIPDTLQELFAR 16 0 1 Unmodified _NSNLEIPDTLQELFAR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 935.4822 2 930.478522 1858.94249 61006.19 0.63605 0.00059183 -0.85411 -0.00079473 -0.21806 -0.0002029 930.478162067652 935.482829660217 129.72 0.81161 129.72 129.48 130.29 0 289 55 7 0 0 0 9.1615E-07 2 86610 97.214 97.214 1 0.74696 0.78364 0 22886000 15589000 7296900 27108 1699 10217 10501 42457;42458 42458 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 881.9401 2 876.934813 1751.85507 64534.82 0.44373 0.00038912 0.14506 0.00012721 0.58879 0.00051633 876.935108795379 881.939110469187 46.905 0.7939 46.905 46.643 47.437 0 454 74 10 0 0 0 8.4918E-18 2 25275 151.9 151.9 1 1.3039 1.5452 0 492760000 208450000 284310000 27109 1440 10218 10502 42459;42460 42459 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.9594 3 584.958968 1751.85507 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.766 1 46.766 46.266 47.266 0 0 0 0 0.0021164 1 25307 50.178 32.478 1 27110 1440 10218 10502 42461 42461 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 881.9388 2 876.934813 1751.85507 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.479 1 47.479 46.979 47.979 0 0 0 0 0.01655 1 25759 43.813 27.559 1 27111 1440 10218 10502 42462 42462 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.4376 2 876.934813 1751.85507 64638.02 0.64824 0.00056846 0.052009 4.5609E-05 0.70025 0.00061407 876.934957335128 881.938992401189 45.534 0.76856 45.534 45.264 46.033 0 446 67 10 0 0 0 2.2484E-17 2 24862 127.36 127.36 1 1.1983 1.3989 0 534630000 239640000 294990000 27112 1440 10218 10502 42463;42464 42464 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.2927 3 584.958968 1751.85507 77829.96 0.74433 0.00043541 -0.31474 -0.00018411 0.42959 0.00025129 584.958872326734 588.294984942862 45.517 0.62562 45.517 45.244 45.869 -3.8147E-06 339 54 10 0 0 0 1.1477E-07 2 24975 89.982 89.982 1 1.205 1.3913 0 246090000 106650000 139430000 27113 1440 10218 10502 42465;42466 42466 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.9395 2 876.934813 1751.85507 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.09 1 46.09 45.59 46.59 0 0 0 0 0.0019472 1 25383 55.841 42.178 1 27114 1440 10218 10502 42467 42467 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 882.4412 2 876.934813 1751.85507 64321.68 0.55439 0.00048616 -0.13714 -0.00012026 0.41725 0.0003659 876.9348043962 881.938771418174 55.103 1.0351 55.103 54.79 55.825 3.8147E-06 423 66 11 0 0 0 7.2872E-05 2 27435 99.481 99.481 1 1.2635 1.0874 0 52998000 23425000 29573000 27115 1440 10218 10502 42468;42469 42468 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.295 3 584.958968 1751.85507 78115.77 0.58045 0.00033954 0.19819 0.00011593 0.77864 0.00045547 584.959506389121 588.294831554824 55.085 0.57753 55.085 54.822 55.4 0 252 38 9 0 0 0 9.854E-05 2 27520 54.288 54.288 1 1.576 1.2857 0 14811000 5738700 9072300 27116 1440 10218 10502 42470;42471 42470 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 881.9398 2 876.934813 1751.85507 64624.78 0.16883 0.00014806 0.22229 0.00019494 0.39113 0.00034299 876.935197436305 881.939120917596 55.565 0.95074 55.565 55.244 56.195 0 357 58 12 0 0 0 0.00015571 1 27103 57.328 57.328 1 1.2711 1.1091 0 57756000 26508000 31248000 27117 1440 10218 10502 42472 42472 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.9604 3 584.958968 1751.85507 78749.33 0.40721 0.0002382 0.47915 0.00028029 0.88636 0.00051848 585.294298484579 588.294907670044 55.522 0.68784 55.522 55.148 55.836 -3.8147E-06 190 37 9 0 0 0 4.7019E-05 2 27185 63.337 63.337 1 1.7173 1.401 0 12817000 4687800 8129600 27118 1440 10218 10502 42473;42474 42474 NSNPALNDNLEK 12 1 0 Unmodified _NSNPALNDNLEK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8326 2 664.82568 1327.63681 75539.24 0.77543 0.00051553 -0.22562 -0.00015 0.54981 0.00036553 664.825613164222 668.83289882751 36.886 0.48963 36.886 36.669 37.158 0 176 45 5 0 0 0 9.2076E-18 1 18722 140.78 140.78 1 3.7787 3.9696 0 30458000 7285900 23172000 27119 1362 10219 10503 42475 42475 NSNPALNDNLEK 12 1 0 Unmodified _NSNPALNDNLEK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.833 2 664.82568 1327.63681 NaN NaN NaN -0.38644 -0.00025691 NaN NaN NaN NaN 36.159 0.5184 36.159 35.814 36.333 0 0 0 0 1.9527E-08 1 18423 112.71 51.032 1 NaN NaN 0 24525000 0 24525000 27120 1362 10219 10503 42476 42476 NSNPALNDNLEK 12 1 0 Unmodified _NSNPALNDNLEK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.8333 2 664.82568 1327.63681 74861.43 0.50131 0.00033328 0.19402 0.00012899 0.69533 0.00046228 664.825504036154 668.832812300143 42.294 0.54969 42.294 42.084 42.634 0 182 41 6 0 0 0 0.020586 1 19751 39.266 35.944 1 2.2656 1.7655 0 3321100 956360 2364700 27121 1362 10219 10503 42477 42477 NSNPALNDNLEK 12 1 0 Unmodified _NSNPALNDNLEK_ 0 0 0 Q5SRT3;Q53FB0;O00299 Q5SRT3 Q5SRT3 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.8331 2 664.82568 1327.63681 75320.52 0.23294 0.00015486 0.37349 0.0002483 0.60643 0.00040317 664.82558058935 668.833111053401 42.55 0.51925 42.55 42.268 42.788 0 140 33 6 0 0 0 0.020076 1 19406 39.625 39.625 1 2.3282 1.8458 0 3154000 954180 2199800 27122 1362 10219 10503 42478 42478 NSNVDSSYLESLYQSCPR 18 0 1 Unmodified _NSNVDSSYLESLYQSCPR_ 0 0 0 Q7Z2W4;C9J6P4;Q05DV5;H7C5K1 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1064.9778 2 1059.97348 2117.9324 60428.09 0.62054 0.00065776 -0.9798 -0.0010386 -0.35925 -0.0003808 1060.47272708887 1065.47789420567 94.804 0.27319 94.804 94.688 94.961 0 75 23 5 0 0 0 1.4788E-16 4 57590 119.32 119.32 1 1.0712 1.068 0 8682500 4633100 4049500 27123 1873 10220 10504 42479;42480;42481;42482 42482 NSNVDSSYLESLYQSCPR 18 0 1 Unmodified _NSNVDSSYLESLYQSCPR_ 0 0 0 Q7Z2W4;C9J6P4;Q05DV5;H7C5K1 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1065.4786 2 1059.97348 2117.9324 NaN NaN NaN -0.82369 -0.00087309 NaN NaN NaN NaN 94.083 0.18978 94.083 94.017 94.207 0 0 0 0 2.1708E-06 1 58461 77.527 64.099 1 NaN NaN 0 4411300 0 4411300 27124 1873 10220 10504 42483 42483 NSNVDSSYLESLYQSCPR 18 0 1 Unmodified _NSNVDSSYLESLYQSCPR_ 0 0 0 Q7Z2W4;C9J6P4;Q05DV5;H7C5K1 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1060.4786 2 1059.97348 2117.9324 59749.19 0.34046 0.00036088 -0.14777 -0.00015664 0.19268 0.00020424 1060.47485699664 1064.97726294127 108.35 0.37844 108.35 108.15 108.53 0 80 17 7 0 0 0 0.0029984 2 62198 35.303 35.039 1 1.0377 0.87487 0 4706400 2037100 2669400 27125 1873 10220 10504 42484;42485 42485 NSNVDSSYLESLYQSCPR 18 0 1 Unmodified _NSNVDSSYLESLYQSCPR_ 0 0 0 Q7Z2W4;C9J6P4;Q05DV5;H7C5K1 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1064.9774 2 1059.97348 2117.9324 60190.64 0.16027 0.00016988 -0.012482 -1.3231E-05 0.14779 0.00015665 1060.47469037618 1065.47908918085 108.35 0.38 108.35 108.18 108.56 0 79 17 8 0 0 0 0.00081011 3 61277 40.552 40.552 1 1.1482 0.98442 0 4470000 1967200 2502800 27126 1873 10220 10504 42486;42487;42488 42486 NSNYADQFNIPTNITTK 17 1 0 Unmodified _NSNYADQFNIPTNITTK_ 0 0 0 A0A087X0P0;Q02224;D6RBW0 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 975.4831 2 970.971061 1939.92757 62959.02 0.12716 0.00012347 0.83166 0.00080752 0.95882 0.00093099 971.474126959162 974.978969851425 108.68 0.38292 108.68 108.51 108.89 0 69 20 6 0 0 0 0.023006 1 61606 24.191 24.191 1 1.3729 1.1127 0 2956200 1273900 1682300 27127 445 10221 10505 42489 42489 NSPQEEVELK 10 1 0 Unmodified _NSPQEEVELK_ 0 0 0 A0A0S2Z3K4;J3QTA2;Q99933;A0A0U1RR89;C9JYK5 A0A0S2Z3K4 A0A0S2Z3K4 BAG1 BAG family molecular chaperone regulator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.7955 2 586.793318 1171.57208 78967.23 0.84711 0.00049708 -0.010906 -6.3994E-06 0.83621 0.00049068 586.793748181916 591.300287619191 37.078 0.40979 37.078 36.884 37.294 0 102 33 5 0 0 0 7.8452E-05 1 19167 98.044 83.926 1 0.63447 0.67638 0 20854000 10231000 10623000 27128 551 10222 10506 42490 42490 NSPVEAVFSYLTGK 14 1 0 Unmodified _NSPVEAVFSYLTGK_ 0 0 0 P52948;H7C3P6 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.3956 2 756.390656 1510.76676 70247.4 0.82926 0.00062724 0.17391 0.00013154 1.0032 0.00075878 756.390771599839 760.397766070462 130.3 0.66144 130.3 130.05 130.71 0 208 41 6 0 0 0 0.00011216 2 84876 83.182 73.495 1 1.3209 1.3638 0 10982000 4548400 6433700 27129 1603 10223 10507 42491;42492 42492 NSPVEAVFSYLTGK 14 1 0 Unmodified _NSPVEAVFSYLTGK_ 0 0 0 P52948;H7C3P6 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.9012 2 756.390656 1510.76676 70218.56 0.66423 0.00050241 0.10855 8.2105E-05 0.77277 0.00058452 756.390807373907 760.397813656149 129.87 0.63155 129.87 129.6 130.23 0 223 43 7 0 0 0 0.00012686 2 86659 80.69 65.718 1 1.3215 1.3197 0 15103000 6448100 8654900 27130 1603 10223 10507 42493;42494 42494 NSQFAGGPLGNPNTTAK 17 1 0 Unmodified _NSQFAGGPLGNPNTTAK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.9183 2 837.415725 1672.8169 66554.44 0.53329 0.00044659 0.57037 0.00047764 1.1037 0.00092423 837.415734521231 841.924508380604 52.541 0.60798 52.541 52.264 52.872 0 243 43 9 0 0 0 1.8659E-12 3 29165 113.69 113.69 1 1.5617 1.6775 0 39585000 15205000 24380000 27131 39 10224 10508 42495;42496;42497 42496 NSQFAGGPLGNPNTTAK 17 1 0 Unmodified _NSQFAGGPLGNPNTTAK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.4162 2 837.415725 1672.8169 67012.16 0.58329 0.00048846 0.17694 0.00014817 0.76023 0.00063663 837.917502253361 841.422763317201 51.122 0.62835 51.122 50.887 51.516 0 219 48 7 0 0 0 9.653E-10 3 28867 110.98 105.91 1 1.4796 1.5078 0 26012000 10015000 15998000 27132 39 10224 10508 42498;42499;42500 42500 NSQFAGGPLGNPNTTAK 17 1 0 Unmodified _NSQFAGGPLGNPNTTAK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 837.9182 2 837.415725 1672.8169 67675.29 0.47265 0.0003958 -0.038071 -3.1881E-05 0.43458 0.00036392 837.917997483937 841.42183788294 61.278 0.64139 61.278 60.987 61.628 0 229 56 6 0 0 0 0.026655 2 30750 23.934 18.855 1 1.3057 1.0228 0 2075700 913400 1162300 27133 39 10224 10508 42501;42502 42502 NSQLFAASQK 10 1 0 Unmodified _NSQLFAASQK_ 0 0 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.2861 2 547.285463 1092.55637 84772.14 0.44756 0.00024494 0.13193 7.2201E-05 0.57948 0.00031714 547.285726581368 551.292198570725 34.46 0.66338 34.46 34.149 34.812 0 165 55 6 0 0 0 0.00682 1 17130 68.557 56.273 1 1.3783 1.4045 0 17928000 10235000 7692900 27134 2121 10225 10509 42503 42503 NSQLFAASQK 10 1 0 Unmodified _NSQLFAASQK_ 0 0 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.2861 2 547.285463 1092.55637 83272.63 0.31005 0.00016969 -0.049622 -2.7157E-05 0.26043 0.00014253 547.285611634352 551.291975435428 39.193 0.85944 39.193 38.719 39.578 0 278 71 6 0 0 0 0.031784 2 17817 50.108 50.108 1 1.5847 1.2491 0 5866100 2075200 3790900 27135 2121 10225 10509 42504;42505 42504 NSQLGIFSSSEK 12 1 0 Unmodified _NSQLGIFSSSEK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.8259 2 648.825149 1295.63574 78959.58 0.62268 0.00040401 -0.19674 -0.00012765 0.42594 0.00027636 648.825089291975 652.831937083909 64.84 0.68706 64.84 64.409 65.096 0 189 60 5 0 0 0 1.2145E-05 1 38152 107.06 107.06 1 0.603 0.60194 0 14329000 9106100 5223300 27136 696 10226 10510 42506 42506 NSSAFSYQR 9 0 1 Unmodified _NSSAFSYQR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2505 2 530.246338 1058.47812 82733.37 0.65501 0.00034732 0.049035 2.6001E-05 0.70404 0.00037332 530.246504012839 535.250376853534 28.22 0.40078 28.22 27.99 28.39 -1.9073E-06 79 29 5 0 0 0 0.024033 1 13315 48.423 34.844 1 0.92061 0.94182 0 26338000 15505000 10833000 27137 1565 10227 10511 42507 42507 NSSAFSYQR 9 0 1 Unmodified _NSSAFSYQR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.2508 2 530.246338 1058.47812 NaN NaN NaN 0.035316 1.8726E-05 NaN NaN NaN NaN 31.937 0.51486 31.937 31.663 32.178 1.9073E-06 0 0 0 0.045667 1 13562 48.423 48.423 1 NaN NaN 0 4268800 0 4268800 27138 1565 10227 10511 42508 42508 NSSAFSYQR 9 0 1 Unmodified _NSSAFSYQR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.2504 2 530.246338 1058.47812 83388.91 0.45182 0.00023958 -0.37428 -0.00019846 0.077546 4.1118E-05 530.246107442261 535.250205331694 32 0.47891 32 31.757 32.236 0 105 25 6 0 0 0 0.043276 2 13118 40.724 40.724 1 1.7175 1.483 0 4376100 1486300 2889700 27139 1565 10227 10511 42509;42510 42509 NSSLLEPQK 9 1 0 Unmodified _NSSLLEPQK_ 0 0 0 Q6P0N0;G5E9K5;C9J2Q8 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 512.2808 2 508.274564 1014.53457 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.96 1 38.96 38.46 39.46 0 0 0 0 0.039237 1 17756 50.04 25.885 1 27140 1849 10228 10512 42511 42511 NSSQFFQSYVER 12 0 1 Unmodified _NSSQFFQSYVER_ 0 0 0 Q14008;Q8IYN5;H0YDX5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.3501 2 746.34678 1490.67901 72431.07 0.50722 0.00037856 0.11006 8.2142E-05 0.61728 0.0004607 746.848736597771 751.349690372486 78.474 0.37848 78.474 78.274 78.652 0 84 33 5 0 0 0 0.0013223 1 46465 61.435 61.435 1 1.142 1.1374 0 8605100 4628800 3976300 27141 1725 10229 10513 42512 42512 NSSQFFQSYVER 12 0 1 Unmodified _NSSQFFQSYVER_ 0 0 0 Q14008;Q8IYN5;H0YDX5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.3505 2 746.34678 1490.67901 NaN NaN NaN 0.17755 0.00013251 NaN NaN NaN NaN 90.012 0.35477 90.012 89.863 90.218 -7.6294E-06 0 0 0 0.042924 1 48986 42.809 38.197 1 NaN NaN 0 1669400 0 1669400 27142 1725 10229 10513 42513 42513 NSSTIIQNPVETPK 14 1 0 Unmodified _NSSTIIQNPVETPK_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.4113 2 764.404295 1526.79404 71059.63 0.50482 0.00038589 -0.093849 -7.1739E-05 0.41097 0.00031415 764.404166592992 768.411315950994 64.427 0.45247 64.427 64.173 64.625 0 166 41 6 0 0 0 2.2927E-14 1 37886 130.56 124.72 1 0.86514 0.86362 0 14381000 6912800 7468300 27143 1552 10230 10514 42514 42514 NSSTIIQNPVETPK 14 1 0 Unmodified _NSSTIIQNPVETPK_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.4043 2 764.404295 1526.79404 71512.63 0.63592 0.0004861 -0.90582 -0.00069241 -0.2699 -0.00020631 764.404358906658 768.409968318468 75.271 0.41093 75.271 75.071 75.482 0 133 30 6 0 0 0 0.014428 2 39977 35.523 35.523 1 0.77095 0.62734 0 2682500 1358100 1324500 27144 1552 10230 10514 42515;42516 42515 NSSTIIQNPVETPK 14 1 0 Unmodified _NSSTIIQNPVETPK_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 764.4048 2 764.404295 1526.79404 71329.13 0.58385 0.00044629 -0.86435 -0.00066071 -0.2805 -0.00021442 764.404170777922 768.409899093365 75.625 0.46901 75.625 75.434 75.903 0 151 33 6 0 0 0 0.0013913 1 39376 54.023 50.599 1 0.78937 0.63862 0 2577800 1572100 1005700 27145 1552 10230 10514 42517 42517 NSSVLEQSFLR 11 0 1 Unmodified _NSSVLEQSFLR_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3403 2 640.335684 1278.65681 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.02 1 85.02 84.52 85.52 0 0 0 0 0.00030074 1 51021 78.655 37.207 1 27146 1103 10231 10515 42518 42518 NSSVLEQSFLR 11 0 1 Unmodified _NSSVLEQSFLR_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.3406 2 640.335684 1278.65681 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.016 1 84.016 83.516 84.516 0 0 0 0 6.6381E-09 1 51539 114.4 70.052 1 27147 1103 10231 10515 42519 42519 NSSYFVEWIPNNVK 14 1 0 Unmodified _NSSYFVEWIPNNVK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.9293 2 848.920112 1695.82567 65087.5 1.0766 0.00091397 0.15225 0.00012925 1.2289 0.0010432 849.421867194882 852.927132651003 110.85 1.2566 110.85 110.41 111.67 0 512 88 9 0 0 0 1.6402E-06 2 69384 107.85 107.85 1 1.4814 1.7063 0 211360000 77475000 133890000 27148 1452;1660;1723;1441;2004;502 10232 10516 42520;42521 42520 NSSYFVEWIPNNVK 14 1 0 Unmodified _NSSYFVEWIPNNVK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.9207 2 848.920112 1695.82567 65405.48 0.82537 0.00070067 0.24799 0.00021052 1.0734 0.00091119 848.920307247094 852.927370096164 110.2 1.3694 110.2 109.62 110.99 0 538 92 10 0 0 0 6.0237E-47 2 70679 185.25 185.25 1 1.4424 1.6535 0 165730000 72009000 93724000 27149 1452;1660;1723;1441;2004;502 10232 10516 42522;42523 42523 NSSYFVEWIPNNVK 14 1 0 Unmodified _NSSYFVEWIPNNVK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 852.9291 2 848.920112 1695.82567 65650.13 0.89578 0.00076044 0.45372 0.00038517 1.3495 0.0011456 849.422293451317 852.927963662051 122.03 0.90445 122.03 121.73 122.63 0 249 45 10 0 0 0 0.00035359 3 72575 61.435 60.646 1 1.2466 1.0703 0 82714000 36800000 45913000 27150 1452;1660;1723;1441;2004;502 10232 10516 42524;42525;42526 42524 NSSYFVEWIPNNVK 14 1 0 Unmodified _NSSYFVEWIPNNVK_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;P04350;B4DE77;B4DJ43;Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q5JP53;Q8IZ29;Q13885;P04350;Q9BV28;Q9BUF5 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 852.9352 2 848.920112 1695.82567 66265.37 0.9051 0.00076836 0.55691 0.00047277 1.462 0.0012411 848.920407568122 852.928274047096 121.84 0.8547 121.84 121.55 122.4 0 227 42 10 0 0 0 0.0046626 2 71874 45.077 45.077 1 1.1518 0.97745 0 68907000 32160000 36747000 27151 1452;1660;1723;1441;2004;502 10232 10516 42527;42528 42528 NSSYVHGGLDSNGK 14 1 0 Unmodified _NSSYVHGGLDSNGK_ 0 0 0 Q6FI03;Q5U0Q1;Q13283;Q6ZP53;Q53HH4;Q32P45;E5RI46;E5RIF8;E5RH42;E5RIZ6;E5RJU8 Q6FI03 Q6FI03 G3BP;DKFZp686L1159;G3BP1 Ras GTPase-activating protein-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.8416 2 717.834037 1433.65352 72985.91 0.67182 0.00048226 -0.21397 -0.00015359 0.45785 0.00032866 717.834183713831 721.840837131031 21.183 0.16365 21.183 21.094 21.258 -1.9073E-06 19 6 4 0 0 0 1.4395E-29 1 7521 154.36 146.47 1 2.408 2.4457 0 6479700 2138000 4341700 27152 1710 10233 10517 42529 42529 NSSYVHGGLDSNGK 14 1 0 Unmodified _NSSYVHGGLDSNGK_ 0 0 0 Q6FI03;Q5U0Q1;Q13283;Q6ZP53;Q53HH4;Q32P45;E5RI46;E5RIF8;E5RH42;E5RIZ6;E5RJU8 Q6FI03 Q6FI03 G3BP;DKFZp686L1159;G3BP1 Ras GTPase-activating protein-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.8347 2 717.834037 1433.65352 72731.9 0.47321 0.00033968 -0.036327 -2.6077E-05 0.43688 0.00031361 717.834050015935 721.841092275299 21.051 0.20008 21.051 20.927 21.127 0 43 10 6 0 0 0 0.00016557 1 7276 74.237 70.35 1 2.5671 2.6156 0 12264000 3819100 8444900 27153 1710 10233 10517 42530 42530 NSTADISIGEEEREDFDTSIESK 23 1 1 Unmodified _NSTADISIGEEEREDFDTSIESK_ 0 0 1 D3DS96;Q9NRL2;Q59G54;A0A087WWN7 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 864.0643 3 858.055948 2571.14601 NaN NaN NaN 0.040144 3.4446E-05 NaN NaN NaN NaN 93.506 0.42119 93.506 93.363 93.785 0 0 0 0 0.0078549 1 51338 33.348 29.754 1 NaN NaN 0 3764300 0 3764300 27154 1187 10234 10518 42531 42531 NSTECTLILTEGDSAK 16 1 0 Unmodified _NSTECTLILTEGDSAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.9124 2 869.911824 1737.80909 64029.56 0.61156 0.00053201 -0.17181 -0.00014946 0.43975 0.00038255 869.911803600411 873.918949478813 71.408 1.5426 71.408 70.726 72.269 0 936 127 10 0 0 0 3.2605E-110 4 41794 236.28 236.28 1 0.73393 0.86768 0 401820000 224560000 177260000 27155 1471 10235 10519 42532;42533;42534;42535 42534 NSTECTLILTEGDSAK 16 1 0 Unmodified _NSTECTLILTEGDSAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.913 2 869.911824 1737.80909 64050.79 0.53806 0.00046807 -0.19029 -0.00016554 0.34777 0.00030253 869.91185219045 873.918903009287 70.321 1.6864 70.321 69.433 71.12 0 928 136 11 0 0 0 4.2774E-95 4 42021 223.03 223.03 1 0.72639 0.85529 0 463380000 268900000 194470000 27156 1471 10235 10519 42536;42537;42538;42539 42538 NSTECTLILTEGDSAK 16 1 0 Unmodified _NSTECTLILTEGDSAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.9127 2 869.911824 1737.80909 64061.23 0.44447 0.00038665 -0.26639 -0.00023174 0.17807 0.00015491 869.912147997486 873.918907876122 81.771 2.5084 81.771 80.843 83.351 0 949 152 13 0 0 0 2.3201E-17 4 44201 127.02 127.02 1 1.3859 1.2209 0 253850000 107000000 146850000 27157 1471 10235 10519 42540;42541;42542;42543 42540 NSTECTLILTEGDSAK 16 1 0 Unmodified _NSTECTLILTEGDSAK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 869.9122 2 869.911824 1737.80909 63983.65 0.21825 0.00018986 -0.11457 -9.9665E-05 0.10368 9.0192E-05 869.912251082295 873.919020990946 82.057 2.3364 82.057 81.095 83.432 0 979 133 13 0 0 0 1.6445E-17 5 43491 130.2 128.06 1 1.3373 1.1568 0 234570000 101450000 133120000 27158 1471 10235 10519 42544;42545;42546;42547;42548 42545 NSVCIIPLR 9 0 1 Unmodified _NSVCIIPLR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.3028 2 536.302601 1070.59065 81115.73 0.82277 0.00044126 0.51524 0.00027632 1.338 0.00071758 536.302740797756 541.306846471516 86.316 0.53436 86.316 86.051 86.585 0 171 41 6 0 0 0 1.1693E-06 1 51888 136.8 126.1 1 0.77153 0.87849 0 115720000 65982000 49741000 27159 1389 10236 10520 42549 42549 NSVCIIPLR 9 0 1 Unmodified _NSVCIIPLR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.307 2 536.302601 1070.59065 82076.27 0.62307 0.00033415 0.33451 0.0001794 0.95758 0.00051355 536.302566598825 541.306677940345 85.231 0.77794 85.231 84.993 85.77 -7.6294E-06 240 62 5 0 0 0 0.0013192 2 52350 86.953 81.295 1 0.77019 0.89307 0 65602000 37154000 28448000 27160 1389 10236 10520 42550;42551 42551 NSVCIIPLR 9 0 1 Unmodified _NSVCIIPLR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.303 2 536.302601 1070.59065 82048.96 0.60608 0.00032504 -0.28476 -0.00015272 0.32132 0.00017233 536.30238506886 541.306543586406 98.587 0.69807 98.587 98.21 98.908 0 180 40 6 0 0 0 0.0016026 2 55585 83.265 77.825 1 0.96097 0.80793 0 9890600 5193700 4696900 27161 1389 10236 10520 42552;42553 42553 NSVCIIPLR 9 0 1 Unmodified _NSVCIIPLR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.3033 2 536.302601 1070.59065 82052.23 0.65368 0.00035057 -0.17255 -9.2539E-05 0.48113 0.00025803 536.302431191048 541.30654002943 98.385 0.6289 98.385 98.029 98.658 0 173 38 6 0 0 0 0.0016026 2 54619 83.265 83.265 1 1.0249 0.84124 0 8748800 4307400 4441400 27162 1389 10236 10520 42554;42555 42555 NSVERPAEPVAGAATPSLVEQQK 23 1 1 Unmodified _NSVERPAEPVAGAATPSLVEQQK_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.424 3 793.415194 2377.22375 69710.37 0.49581 0.00039338 -0.17997 -0.00014279 0.31584 0.00025059 793.749224174033 799.422521024507 64.494 0.38175 64.494 64.337 64.719 7.6294E-06 112 36 5 0 0 0 2.0077E-05 1 37054 37.817 37.817 1 0.91936 0.98411 0 13319000 6535100 6784300 27163 2002 10237 10521 42556 42556 NSVERPAEPVAGAATPSLVEQQK 23 1 1 Unmodified _NSVERPAEPVAGAATPSLVEQQK_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.4229 3 793.415194 2377.22375 69256.06 0.58724 0.00046593 -0.17863 -0.00014173 0.40861 0.0003242 793.749890136875 799.421753622345 63.073 0.43458 63.073 62.893 63.328 0 144 35 6 0 0 0 4.3575E-08 1 37026 56.488 52.756 1 1.0116 1.1212 0 9049300 4637800 4411500 27164 2002 10237 10521 42557 42557 NSVERPAEPVAGAATPSLVEQQK 23 1 1 Unmodified _NSVERPAEPVAGAATPSLVEQQK_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.7501 3 793.415194 2377.22375 68512.33 0.55276 0.00043857 0.07003 5.5563E-05 0.62279 0.00049413 793.749475981 799.756965469761 74.548 0.46352 74.548 74.323 74.786 7.6294E-06 146 25 8 0 0 0 0.0019958 1 38790 25.38 25.38 1 2.2904 1.9209 0 5199600 1702500 3497200 27165 2002 10237 10521 42558 42558 NSVEVALNK 9 1 0 Unmodified _NSVEVALNK_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.2764 2 487.269281 972.52401 NaN NaN NaN -0.5325 -0.00025947 NaN NaN NaN NaN 37.391 0.35395 37.391 37.305 37.659 0 0 0 0 0.042566 1 19075 49.423 34.163 1 NaN NaN 0 10087000 0 10087000 27166 567 10238 10522 42559 42559 NSVEVALNK 9 1 0 Unmodified _NSVEVALNK_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.2767 2 487.269281 972.52401 NaN NaN NaN 0.042212 2.0569E-05 NaN NaN NaN NaN 36.543 0.55151 36.543 36.256 36.807 0 0 0 0 0.00061634 1 18762 90.657 67.917 1 NaN NaN 0 8924300 0 8924300 27167 567 10238 10522 42560 42560 NSVLPQAFDR 10 0 1 Unmodified _NSVLPQAFDR_ 0 0 0 O43248;J3KMZ0 O43248 O43248 HOXC11 Homeobox protein Hox-C11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.7991 2 573.798737 1145.58292 NaN NaN NaN 1.2481 0.00071615 NaN NaN NaN NaN 70.267 0.46167 70.267 70.049 70.51 0 0 0 0 0.0094867 1 41969 67.207 57.296 1 NaN NaN 0 8647900 8647900 0 27168 1383 10239 10523 42561 42561 NSVPLSDALLNK 12 1 0 Unmodified _NSVPLSDALLNK_ 0 0 0 P33981;D6RF82;D6REX1;D6RIC6 P33981 P33981 TTK Dual specificity protein kinase TTK ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8605 2 635.853709 1269.69287 NaN NaN NaN 0.14387 9.1483E-05 NaN NaN NaN NaN 83.776 0.34087 83.776 83.605 83.946 -7.6294E-06 0 0 0 0.041011 1 51330 43.512 6.8187 1 NaN NaN 0 5892800 0 5892800 27169 1539 10240 10524 42562 42562 NSVPVTVAMVER 12 0 1 Oxidation (M) _NSVPVTVAM(ox)VER_ NSVPVTVAM(1)VER NSVPVTVAM(42.74)VER 0 1 0 Q9Y3T9;B3KNC3 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.3459 2 659.345194 1316.67584 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.691 1 58.691 58.191 59.191 0 0 0 0 0.022082 1 34134 42.743 23.963 1 27170 2139 10241 10525 42563 42563 1979 NSVQTPVENSTNSQHQVK 18 1 0 Unmodified _NSVQTPVENSTNSQHQVK_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6;E9PJ60 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1002.9966 2 998.987774 1995.961 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.03 1 22.03 21.53 22.53 0 0 0 0 0.0062184 1 8196 47.915 34.009 1 27171 1901 10242 10526 42564 42564 NSVQTPVENSTNSQHQVK 18 1 0 Unmodified _NSVQTPVENSTNSQHQVK_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6;E9PJ60 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3276 3 666.327608 1995.961 74250.83 0.34267 0.00022833 -0.35049 -0.00023354 -0.007819 -5.21E-06 666.326996465255 668.998908710067 21.871 0.26133 21.871 21.711 21.972 1.9073E-06 54 11 8 0 0 0 0.00010951 1 7960 46.131 46.131 1 2.0379 2.0703 0 12728000 3304700 9422900 27172 1901 10242 10526 42565 42565 NSVQTPVENSTNSQHQVK 18 1 0 Unmodified _NSVQTPVENSTNSQHQVK_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6;E9PJ60 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1003.4972 2 998.987774 1995.961 NaN NaN NaN -0.0028954 -2.8924E-06 NaN NaN NaN NaN 21.903 0.18226 21.903 21.762 21.945 0 0 0 0 0.027929 1 7928 35.737 24.204 1 NaN NaN 0 5207500 0 5207500 27173 1901 10242 10526 42566 42566 NSVQTPVENSTNSQHQVK 18 1 0 Unmodified _NSVQTPVENSTNSQHQVK_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6;E9PJ60 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.9998 3 666.327608 1995.961 74469.14 0.58538 0.00039005 0.17039 0.00011353 0.75577 0.00050359 666.328075427783 668.999595152365 24.526 0.58211 24.526 24.254 24.836 0 94 31 8 0 0 0 0.043885 1 8664 14.77 11.108 1 1.6445 1.3912 0 1518100 678950 839120 27174 1901 10242 10526 42567 42567 NSVSQISVLSGGK 13 1 0 Unmodified _NSVSQISVLSGGK_ 0 0 0 A4D275;O15143 A4D275 A4D275 ARPC1B Actin-related protein 2/3 complex subunit 1B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.3566 2 638.348791 1274.68303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.693 1 64.693 64.193 65.193 0 0 0 0 0.0042184 1 37190 61.235 34.264 1 27175 670 10243 10527 42568 42568 NSVSQISVLSGGK 13 1 0 Unmodified _NSVSQISVLSGGK_ 0 0 0 A4D275;O15143 A4D275 A4D275 ARPC1B Actin-related protein 2/3 complex subunit 1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3555 2 638.348791 1274.68303 79185.84 0.64599 0.00041236 0.70048 0.00044715 1.3465 0.00085951 638.348820106634 642.356617186004 63.443 0.7853 63.443 63.077 63.862 0 160 66 5 0 0 0 0.00028676 1 37239 83.045 83.045 1 2.2038 2.2284 0 13120000 5833700 7286500 27176 670 10243 10527 42569 42569 NSVTGGTAAFEPSVDYCVVK 20 1 0 Unmodified _NSVTGGTAAFEPSVDYCVVK_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1050.999 2 1050.99896 2099.98337 NaN NaN NaN 0.091424 9.6087E-05 NaN NaN NaN NaN 94.413 0.23335 94.413 94.283 94.517 -7.6294E-06 0 0 0 0.018088 1 58628 35.037 20.779 1 NaN NaN 0 7895600 7895600 0 27177 1259 10244 10528 42570 42570 NSVTPDMMEEMYK 13 1 0 3 Oxidation (M) _NSVTPDM(ox)M(ox)EEM(ox)YK_ NSVTPDM(1)M(1)EEM(1)YK NSVTPDM(127.83)M(127.83)EEM(127.83)YK 0 3 0 A2RUM7;P46777;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.8303 2 811.822774 1621.631 67244.77 0.58882 0.00047802 -0.49386 -0.00040093 0.094959 7.709E-05 811.822619449954 815.829945231114 27.551 0.87085 27.551 27.119 27.99 0 337 51 8 0 0 0 4.5957E-14 2 12489 127.83 121.83 1 7.0636 7.8785 0 62100000 8615400 53485000 27178 653 10245 10529 42571;42572 42571 508;509;510 NSVTPDMMEEMYK 13 1 0 3 Oxidation (M) _NSVTPDM(ox)M(ox)EEM(ox)YK_ NSVTPDM(1)M(1)EEM(1)YK NSVTPDM(162.38)M(162.38)EEM(162.38)YK 0 3 0 A2RUM7;P46777;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.8314 2 811.822774 1621.631 66084.92 0.73936 0.00060023 -0.58127 -0.00047189 0.15809 0.00012834 811.822949047827 815.829963987232 27.079 0.70018 27.079 26.701 27.401 -1.9073E-06 255 34 10 0 0 0 2.8666E-25 2 12183 162.38 159.26 1 6.0813 6.8089 0 82848000 11587000 71261000 27179 653 10245 10529 42573;42574 42573 508;509;510 NSYVAGQYDDAASYQR 16 0 1 Unmodified _NSYVAGQYDDAASYQR_ 0 0 0 Q2VF42;Q2Q9H2;Q2Q9B7;A8K8D9;P11413;Q0PHS1;E7EUI8;B4DYA7;E9PD92;E7EM57;Q0PHS5 Q2VF42 Q2VF42 G6PD Glucose-6-phosphate 1-dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 909.4009 2 904.397729 1806.78091 NaN NaN NaN 0.41888 0.00037883 NaN NaN NaN NaN 50.468 0.40308 50.468 50.213 50.617 0 0 0 0 0.00023059 1 27719 70.438 64.593 1 NaN NaN 0 8111800 0 8111800 27180 775 10246 10530 42575 42575 NSYVAGQYDDAASYQR 16 0 1 Unmodified _NSYVAGQYDDAASYQR_ 0 0 0 Q2VF42;Q2Q9H2;Q2Q9B7;A8K8D9;P11413;Q0PHS1;E7EUI8;B4DYA7;E9PD92;E7EM57;Q0PHS5 Q2VF42 Q2VF42 G6PD Glucose-6-phosphate 1-dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 909.9037 2 904.397729 1806.78091 66720.87 0.3323 0.00030053 0.515 0.00046577 0.8473 0.0007663 904.398222266283 909.402517364559 49.344 0.36262 49.344 49.125 49.487 0 122 32 5 0 0 0 2.5432E-06 2 27659 92.039 86.194 1 2.0477 2.0605 0 10903000 4556200 6346600 27181 775 10246 10530 42576;42577 42577 NTAAVLEAAQELLR 14 0 1 Unmodified _NTAAVLEAAQELLR_ 0 0 0 Q9BVQ7 Q9BVQ7 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.92 2 749.91483 1497.81511 70740.65 0.80566 0.00060418 0.41587 0.00031187 1.2215 0.00091604 749.914885208207 754.919422703815 123.75 0.40342 123.75 123.55 123.95 0 112 28 5 0 0 0 8.8581E-07 2 80214 110.08 103.15 1 0.853 0.85363 0 7993700 3964500 4029200 27182 2009 10247 10531 42578;42579 42578 NTAAVLEAAQELLR 14 0 1 Unmodified _NTAAVLEAAQELLR_ 0 0 0 Q9BVQ7 Q9BVQ7 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.9188 2 749.91483 1497.81511 70949.38 0.91957 0.0006896 -0.14854 -0.00011139 0.77104 0.00057821 749.914511187382 754.919005186268 123.23 0.44466 123.23 123.05 123.5 7.6294E-06 142 33 6 0 0 0 8.1988E-10 2 81806 122.33 122.33 1 1.0415 1.0367 0 7930100 3269200 4660900 27183 2009 10247 10531 42580;42581 42581 NTAPDNGPILLQAQTTQR 18 0 1 Unmodified _NTAPDNGPILLQAQTTQR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 974.5089 2 969.505603 1936.99665 61912.97 -0.014549 -1.4105E-05 0.22662 0.00021971 0.21207 0.00020561 969.50580224152 974.509885682906 74.517 0.73561 74.517 74.145 74.88 0 386 60 8 0 0 0 8.7613E-17 2 43539 121.76 111.71 1 0.87859 0.97575 0 71257000 38722000 32535000 27184 1698;436 10248 10532 42582;42583 42582 NTAPDNGPILLQAQTTQR 18 0 1 Unmodified _NTAPDNGPILLQAQTTQR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 969.5063 2 969.505603 1936.99665 62096.65 0.16547 0.00016042 0.19784 0.00019181 0.36331 0.00035223 969.505715461427 974.509958276094 73.418 0.7551 73.418 73.061 73.816 0 423 63 8 0 0 0 2.0772E-22 2 43926 132.31 132.31 1 0.86977 1.0061 0 68328000 37348000 30980000 27185 1698;436 10248 10532 42584;42585 42585 NTAPDNGPILLQAQTTQR 18 0 1 Unmodified _NTAPDNGPILLQAQTTQR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 970.0095 2 969.505603 1936.99665 61877.52 -0.064287 -6.2326E-05 0.36228 0.00035123 0.29799 0.0002889 969.505926297252 974.510110740568 84.857 0.7674 84.857 84.505 85.272 0 397 54 10 0 0 0 0.010714 1 46194 28.727 28.727 1 1.3119 1.1094 0 30521000 12946000 17575000 27186 1698;436 10248 10532 42586 42586 NTAPDNGPILLQAQTTQR 18 0 1 Unmodified _NTAPDNGPILLQAQTTQR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.0076 2 969.505603 1936.99665 61874.31 0.15844 0.00015361 0.11562 0.00011209 0.27405 0.0002657 969.505625941198 974.509900767468 85.014 0.8364 85.014 84.595 85.431 0 427 57 10 0 0 0 7.5937E-05 1 45490 50.155 50.155 1 1.2737 1.1111 0 27401000 11743000 15657000 27187 1698;436 10248 10532 42587 42587 NTCEAVVLGTLHPR 14 0 1 Unmodified _NTCEAVVLGTLHPR_ 0 0 0 Q9NQT4;M0R050;B2RC50 Q9NQT4 Q9NQT4 EXOSC5 Exosome complex component RRP46 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.4097 2 783.906482 1565.79841 NaN NaN NaN 0.14141 0.00011085 NaN NaN NaN NaN 69.673 0.31148 69.673 69.522 69.833 7.6294E-06 0 0 0 0.00015593 1 41480 87.001 75.85 1 NaN NaN 0 4775300 4775300 0 27188 2060 10249 10533 42588 42588 NTDEMVELR 9 0 1 Oxidation (M) _NTDEM(ox)VELR_ NTDEM(1)VELR NTDEM(57.59)VELR 0 1 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;S4R457 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.7629 2 561.75842 1121.50229 NaN NaN NaN 0.14226 7.9918E-05 NaN NaN NaN NaN 31.805 0.7901 31.805 31.45 32.24 1.9073E-06 0 0 0 0.0067429 2 15663 57.59 39.554 1 NaN NaN 0 7108700 0 7108700 27189 102 10250 10534 42589;42590 42589 89 NTDEMVELR 9 0 1 Oxidation (M) _NTDEM(ox)VELR_ NTDEM(1)VELR NTDEM(57.59)VELR 0 1 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;S4R457 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.7623 2 561.75842 1121.50229 82033.28 0.58525 0.00032877 -0.84689 -0.00047575 -0.26164 -0.00014698 561.757983804846 566.762303649793 31.353 0.67899 31.353 30.816 31.495 0 119 58 5 0 0 0 0.0059659 1 15402 57.59 37.813 1 4.802 4.8488 0 19741000 3373800 16367000 27190 102 10250 10534 42591 42591 89 NTDEMVELR 9 0 1 Oxidation (M) _NTDEM(ox)VELR_ NTDEM(1)VELR NTDEM(57.71)VELR 0 1 0 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;S4R457 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.7613 2 561.75842 1121.50229 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.451 1 30.451 29.951 30.951 0 0 0 0 0.0074037 1 14932 57.708 31.106 1 27191 102 10250 10534 42592 42592 89 NTDNSEDSRAEDNFNLEK 18 1 1 Unmodified _NTDNSEDSRAEDNFNLEK_ 0 0 1 Q86U86;E7EVG2;Q9NUX9 Q86U86 Q86U86 PBRM1 Protein polybromo-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.9697 3 699.970038 2096.88828 NaN NaN NaN 0.092755 6.4926E-05 NaN NaN NaN NaN 38.778 0.31007 38.778 38.673 38.984 0 0 0 0 0.0030407 1 20434 45.876 41.524 1 NaN NaN 0 5404700 5404700 0 27192 1883 10251 10535 42593 42593 NTEIGFLQDALSK 13 1 0 Unmodified _NTEIGFLQDALSK_ 0 0 0 A8K4A8;A0A024R8Z9;Q6PI48;Q9H9J7;Q9NVT8 A8K4A8 A8K4A8 DARS2 Aspartate--tRNA ligase, mitochondrial MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.3815 2 718.375006 1434.73546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.37 1 119.37 118.87 119.87 0 0 0 0 0.018503 1 69781 48.568 11.224 1 27193 266 10252 10536 42594 42594 NTELAVFHDETEIQNQTDLLSLSGK 25 1 0 Unmodified _NTELAVFHDETEIQNQTDLLSLSGK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 937.8039 3 934.797921 2801.37193 NaN NaN NaN -0.23015 -0.00021514 NaN NaN NaN NaN 112.41 0.37881 112.41 112.24 112.62 -7.6294E-06 0 0 0 0.0097434 1 70859 28.665 25.864 1 NaN NaN 0 13390000 0 13390000 27194 1561 10253 10537 42595 42595 NTELAVFHDETEIQNQTDLLSLSGK 25 1 0 Unmodified _NTELAVFHDETEIQNQTDLLSLSGK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 938.1349 3 934.797921 2801.37193 NaN NaN NaN -0.36212 -0.00033851 NaN NaN NaN NaN 111.79 0.52584 111.79 111.52 112.04 0 0 0 0 7.408E-06 2 72111 44.158 41.349 1 NaN NaN 0 11286000 0 11286000 27195 1561 10253 10537 42596;42597 42597 NTELAVFHDETEIQNQTDLLSLSGK 25 1 0 Unmodified _NTELAVFHDETEIQNQTDLLSLSGK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 937.8041 3 934.797921 2801.37193 62997.71 0.89383 0.00083555 -0.52483 -0.00049061 0.369 0.00034494 935.131499629733 937.467661354164 123.09 0.38051 123.09 122.95 123.33 0 99 17 8 0 0 0 5.4326E-14 1 73537 85.376 85.376 1 0.71215 0.56868 0 9206000 5151500 4054500 27196 1561 10253 10537 42598 42598 NTELAVFHDETEIQNQTDLLSLSGK 25 1 0 Unmodified _NTELAVFHDETEIQNQTDLLSLSGK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 935.1324 3 934.797921 2801.37193 63459.84 0.82917 0.00077511 -0.67641 -0.00063231 0.15276 0.0001428 935.131770477565 937.803488305027 122.98 0.43629 122.98 122.76 123.19 -7.6294E-06 108 21 11 0 0 0 6.2981E-06 2 72538 37.934 37.934 1 0.78439 0.64734 0 11237000 6055300 5181300 27197 1561 10253 10537 42599;42600 42600 NTENNDVEISETK 13 1 0 Unmodified _NTENNDVEISETK_ 0 0 0 Q5UIP0;H7C2B5 Q5UIP0 Q5UIP0 RIF1 Telomere-associated protein RIF1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.8453 2 746.841724 1491.6689 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.894 1 26.894 26.394 27.394 0 0 0 0 0.0027984 1 12261 66.262 38.52 1 27198 1829 10254 10538 42601 42601 NTETALDNKPCGPQCYQHLEGAK 23 2 0 Unmodified _NTETALDNKPCGPQCYQHLEGAK_ 0 0 1 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;B7Z8K5 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 878.0685 3 877.735721 2630.18533 65674.07 0.37335 0.0003277 0.24909 0.00021864 0.62244 0.00054634 878.070295767507 883.413036725721 43.236 0.39727 43.236 42.997 43.394 0 129 30 6 0 0 0 1.5035E-09 3 23091 75.773 75.773 1 0.94398 1.1177 0 15943000 8780400 7162400 27199 456 10255 10539 42602;42603;42604 42604 NTETALDNKPCGPQCYQHLEGAK 23 2 0 Unmodified _NTETALDNKPCGPQCYQHLEGAK_ 0 0 1 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;B7Z8K5 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.4133 3 877.735721 2630.18533 64983.38 0.54449 0.00047792 -0.1455 -0.00012771 0.39899 0.00035021 878.069854407765 883.412541047703 42.014 0.40265 42.014 41.821 42.224 3.8147E-06 151 38 7 0 0 0 3.9691E-11 4 22587 87.156 87.156 1 0.85106 0.9773 0 22722000 11176000 11546000 27200 456 10255 10539 42605;42606;42607;42608 42607 NTETALDNKPCGPQCYQHLEGAK 23 2 0 Unmodified _NTETALDNKPCGPQCYQHLEGAK_ 0 0 1 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;B7Z8K5 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 883.4128 3 877.735721 2630.18533 64714.46 0.27956 0.00024538 -0.27205 -0.00023879 0.0075116 6.5932E-06 878.070118317374 883.412772760512 51.206 0.57408 51.206 50.953 51.527 3.8147E-06 275 39 11 0 0 0 1.4975E-05 1 25141 40.81 40.81 1 2.1176 1.813 0 9131600 2730700 6400900 27201 456 10255 10539 42609 42609 NTETALDNKPCGPQCYQHLEGAK 23 2 0 Unmodified _NTETALDNKPCGPQCYQHLEGAK_ 0 0 1 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0;B7Z8K5 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 878.0694 3 877.735721 2630.18533 64272.74 0.024002 2.1067E-05 0.12038 0.00010567 0.14439 0.00012673 878.404514968678 883.4129664045 51.687 0.62914 51.687 51.443 52.072 -3.8147E-06 316 45 10 0 0 0 0.0015954 1 24842 27.72 27.309 1 1.9308 1.6304 0 7419400 2608800 4810600 27202 456 10255 10539 42610 42610 NTGESASQLLDAETAER 17 0 1 Unmodified _NTGESASQLLDAETAER_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614;B4DYM1;B4E0T8;B4DZ32 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.4218 2 896.421401 1790.82825 NaN NaN NaN 0.31396 0.00028144 NaN NaN NaN NaN 71.166 0.31049 71.166 70.981 71.291 0 0 0 0 0.00038976 3 41512 65.805 56.118 1 NaN NaN 0 3095800 3095800 0 27203 12 10256 10540 42611;42612;42613 42613 NTGESASQLLDAETAER 17 0 1 Unmodified _NTGESASQLLDAETAER_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614;B4DYM1;B4E0T8;B4DZ32 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.9287 2 896.421401 1790.82825 64904.58 0.59893 0.00053689 0.54664 0.00049002 1.1456 0.0010269 896.923689548569 901.426077512651 69.977 0.29527 69.977 69.819 70.115 0 58 22 5 0 0 0 7.052E-05 1 41676 69.716 60.029 1 1.4768 1.4852 0 9292300 3875100 5417200 27204 12 10256 10540 42614 42614 NTGESASQLLDAETAER 17 0 1 Unmodified _NTGESASQLLDAETAER_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614;B4DYM1;B4E0T8;B4DZ32 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.4219 2 896.421401 1790.82825 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.887 1 69.887 69.387 70.387 0 0 0 0 0.00038523 1 41663 69.716 62.067 1 27205 12 10256 10540 42615 42615 NTGIICTIGPASR 13 0 1 Unmodified _NTGIICTIGPASR_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.3572 2 680.356093 1358.69763 NaN NaN NaN -0.33944 -0.00023094 NaN NaN NaN NaN 69.34 0.70535 69.34 69.018 69.723 0 0 0 0 0.00026071 1 40198 88.187 77.357 1 NaN NaN 0 19855000 19855000 0 27206 1481 10257 10541 42616 42616 NTGIICTIGPASR 13 0 1 Unmodified _NTGIICTIGPASR_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.3566 2 680.356093 1358.69763 NaN NaN NaN -0.99378 -0.00067613 NaN NaN NaN NaN 68.155 0.63795 68.155 67.863 68.501 0 0 0 0 1.1651E-05 2 40348 97.163 82.225 1 NaN NaN 0 24814000 24814000 0 27207 1481 10257 10541 42617;42618 42618 NTGIICTIGPASR 13 0 1 Unmodified _NTGIICTIGPASR_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.3563 2 680.356093 1358.69763 73108.13 0.58514 0.00039811 0.14195 9.6577E-05 0.72709 0.00049468 680.356975421563 685.360191238618 79.01 1.0231 79.01 78.587 79.611 -7.6294E-06 161 60 5 0 0 0 0.0032855 1 42480 62.088 62.088 1 1.2663 1.0878 0 8015800 3379900 4635800 27208 1481 10257 10541 42619 42619 NTGIICTIGPASR 13 0 1 Unmodified _NTGIICTIGPASR_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;B4DNK4;H3BTN5;B4DRT3;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.3575 2 680.356093 1358.69763 73126.05 0.53065 0.00036103 0.10119 6.8847E-05 0.63184 0.00042988 680.357039354179 685.360294733574 79.225 0.7987 79.225 78.812 79.61 0 161 48 6 0 0 0 0.0022314 1 41748 64.55 64.55 1 1.4683 1.2235 0 6881100 2399200 4481900 27209 1481 10257 10541 42620 42620 NTGVILANDANAER 14 0 1 Unmodified _NTGVILANDANAER_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.3754 2 729.370786 1456.72702 70527.02 0.69457 0.0005066 -0.09042 -6.595E-05 0.60415 0.00044065 729.37075834921 734.374882303323 49.113 1.0246 49.113 48.847 49.871 0 416 72 11 0 0 0 2.4933E-114 2 26776 241.31 241.31 1 1.0921 1.2931 0 396440000 189610000 206830000 27210 1570 10258 10542 42621;42622 42622 NTGVILANDANAER 14 0 1 Unmodified _NTGVILANDANAER_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.3719 2 729.370786 1456.72702 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.04 1 50.04 49.54 50.54 0 0 0 0 0.011683 1 27605 50.207 31.896 1 27211 1570 10258 10542 42623 42623 NTGVILANDANAER 14 0 1 Unmodified _NTGVILANDANAER_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.3718 2 729.370786 1456.72702 69993.06 0.39305 0.00028668 0.073942 5.3931E-05 0.467 0.00034061 729.370781253303 734.375079733067 47.829 0.96261 47.829 47.395 48.357 0 328 68 10 0 0 0 3.7988E-30 2 26581 199.12 191.74 1 1.069 1.2418 0 360460000 173000000 187460000 27212 1570 10258 10542 42624;42625 42624 NTGVILANDANAER 14 0 1 Unmodified _NTGVILANDANAER_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.8736 2 729.370786 1456.72702 70473.33 0.68028 0.00049618 0.15105 0.00011017 0.83133 0.00060635 729.370721945609 734.375101434287 56.514 1.2399 56.514 56.038 57.278 3.8147E-06 443 82 10 0 0 0 0.00032479 2 28358 75.479 70.584 1 1.1578 0.99688 0 57496000 26143000 31353000 27213 1570 10258 10542 42626;42627 42627 NTGVILANDANAER 14 0 1 Unmodified _NTGVILANDANAER_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.3755 2 729.370786 1456.72702 69937.16 0.72537 0.00052906 0.027619 2.0144E-05 0.75299 0.00054921 729.370790505679 734.375021179107 57.011 0.96976 57.011 56.689 57.659 0 420 65 10 0 0 0 2.6923E-05 3 28057 96.604 96.604 1 1.2549 1.095 0 61476000 27912000 33564000 27214 1570 10258 10542 42628;42629;42630 42629 NTHATTHNAYDLEVIDIFK 19 1 0 Unmodified _NTHATTHNAYDLEVIDIFK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.7067 3 734.699042 2201.0753 71718.79 0.84082 0.00061775 0.29991 0.00022034 1.1407 0.00083809 735.033205464725 737.370550475198 115.06 0.57037 115.06 114.78 115.35 -7.6294E-06 141 25 9 0 0 0 1.0892E-05 1 67267 53.254 53.254 1 1.3036 1.0353 0 10112000 4243400 5868900 27215 139 10259 10543 42631 42631 NTHATTHNAYDLEVIDIFK 19 1 0 Unmodified _NTHATTHNAYDLEVIDIFK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.3708 3 734.699042 2201.0753 71719.24 0.76522 0.00056221 0.227 0.00016677 0.99222 0.00072898 735.03318480982 737.370594468051 114.77 0.51212 114.77 114.52 115.03 7.6294E-06 118 22 8 0 0 0 0.0017707 1 66252 31.079 31.079 1 1.219 1.005 0 10895000 4608900 6286600 27216 139 10259 10543 42632 42632 NTIDINNFDGK 11 1 0 Unmodified _NTIDINNFDGK_ 0 0 0 Q2M1V9;A0A0A0MTH9;O14981 Q2M1V9 Q2M1V9 BTAF1 TATA-binding protein-associated factor 172 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.8119 2 625.804217 1249.59388 76487.54 0.83977 0.00052553 0.5092 0.00031866 1.349 0.00084419 625.803839612531 629.811278991815 65.858 0.28863 65.858 65.705 65.993 0 100 26 6 0 0 0 0.0068025 1 37960 53.751 39.077 1 1.1138 1.1258 0 6901600 2932300 3969300 27217 488 10260 10544 42633 42633 NTIEMQAITALAHLR 15 0 1 Oxidation (M) _NTIEM(ox)QAITALAHLR_ NTIEM(1)QAITALAHLR NTIEM(92.27)QAITALAHLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.6385 3 566.638289 1696.89304 80177.65 1.0561 0.0005984 0.77472 0.00043899 1.8308 0.0010374 566.638161477929 569.97435469972 110.34 0.69221 110.34 109.96 110.65 0 414 49 12 0 0 0 2.7789E-06 2 69139 92.265 81.21 1 1.8405 2.1155 0 142450000 47941000 94504000 27218 1183 10261 10545 42634;42635 42635 898 NTIEMQAITALAHLR 15 0 1 Oxidation (M) _NTIEM(ox)QAITALAHLR_ NTIEM(1)QAITALAHLR NTIEM(113.52)QAITALAHLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.9729 3 566.638289 1696.89304 79918.91 0.9301 0.00052703 0.2424 0.00013735 1.1725 0.00066438 566.638253420207 569.974553499224 111 1.0076 111 110.61 111.62 0 339 67 9 0 0 0 1.1464E-10 2 69765 113.52 95.156 1 1.4563 1.6416 0 98690000 38054000 60636000 27219 1183 10261 10545 42636;42637 42637 898 NTIEMQAITALAHLR 15 0 1 Oxidation (M) _NTIEM(ox)QAITALAHLR_ NTIEM(1)QAITALAHLR NTIEM(61.24)QAITALAHLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 854.4595 2 849.453796 1696.89304 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.21 1 110.21 109.71 110.71 0 0 0 0 0.00061462 1 69176 61.235 44.068 1 27220 1183 10261 10545 42638 42638 898 NTIEMQAITALAHLR 15 0 1 Oxidation (M) _NTIEM(ox)QAITALAHLR_ NTIEM(1)QAITALAHLR NTIEM(135.14)QAITALAHLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.6387 3 566.638289 1696.89304 80092.32 0.67445 0.00038217 0.35322 0.00020015 1.0277 0.00058232 566.638251332713 569.97429850659 109.46 1.0646 109.46 109.12 110.18 -7.6294E-06 364 69 11 0 0 0 3.0531E-16 3 70163 135.14 124.08 1 1.7464 2.0197 0 68617000 25285000 43332000 27221 1183 10261 10545 42639;42640;42641 42640 898 NTIEMQAITALAHLR 15 0 1 Oxidation (M) _NTIEM(ox)QAITALAHLR_ NTIEM(1)QAITALAHLR NTIEM(122.63)QAITALAHLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.6397 3 566.638289 1696.89304 80765 0.89722 0.0005084 0.29501 0.00016716 1.1922 0.00067556 566.638512950876 569.974552925039 109.94 0.8201 109.94 109.66 110.48 0 277 53 7 0 0 0 2.6097E-11 2 70846 122.63 104.27 1 1.5155 1.7489 0 71157000 29691000 41466000 27222 1183 10261 10545 42642;42643 42643 898 NTIEMQAITALAHLR 15 0 1 Oxidation (M) _NTIEM(ox)QAITALAHLR_ NTIEM(1)QAITALAHLR NTIEM(113.59)QAITALAHLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.6388 3 566.638289 1696.89304 79458.3 0.8658 0.0004906 -0.3136 -0.0001777 0.5522 0.0003129 566.638072465301 569.974367419556 122.61 0.68867 122.61 122.33 123.02 7.6294E-06 169 34 9 0 0 0 1.14E-10 2 73171 113.59 94.99 1 0.99243 0.82213 0 20116000 9831000 10285000 27223 1183 10261 10545 42644;42645 42644 898 NTIEMQAITALAHLR 15 0 1 Oxidation (M) _NTIEM(ox)QAITALAHLR_ NTIEM(1)QAITALAHLR NTIEM(44.25)QAITALAHLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.9741 3 566.638289 1696.89304 78951.67 0.82274 0.0004662 -0.44992 -0.00025494 0.37282 0.00021125 566.637989547269 570.308554434032 127.81 0.69263 127.81 127.35 128.04 0 117 26 9 0 0 0 0.00067686 1 76990 44.252 35.455 1 1.663 1.4004 0 4598700 1589500 3009200 27224 1183 10261 10545 42646 42646 898 NTIEMQAITALAHLR 15 0 1 Oxidation (M) _NTIEM(ox)QAITALAHLR_ NTIEM(1)QAITALAHLR NTIEM(60.55)QAITALAHLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.975 3 566.638289 1696.89304 79458.75 0.83297 0.00047199 -0.31857 -0.00018052 0.5144 0.00029148 566.638120056278 569.974372701099 122.32 0.51219 122.32 122.12 122.63 0 144 25 9 0 0 0 7.471E-05 1 72076 60.549 50.064 1 0.99151 0.8649 0 28017000 14085000 13931000 27225 1183 10261 10545 42647 42647 898 NTIEMQAITALAHLR 15 0 1 Oxidation (M) _NTIEM(ox)QAITALAHLR_ NTIEM(1)QAITALAHLR NTIEM(71.53)QAITALAHLR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.9753 3 566.638289 1696.89304 79556.42 0.64181 0.00036368 -0.45813 -0.00025959 0.18369 0.00010408 566.972202638985 569.974264433344 127.49 0.45305 127.49 127.28 127.74 0 103 18 8 0 0 0 5.7007E-05 1 75936 71.531 53.167 1 1.6612 1.3845 0 6820000 2844600 3975400 27226 1183 10261 10545 42648 42648 898 NTIEMQAITALAHLR 15 0 1 Unmodified _NTIEMQAITALAHLR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.3072 3 561.306651 1680.89812 78917.22 0.85566 0.00048029 -0.38488 -0.00021604 0.47078 0.00026425 561.306505845242 564.642592086457 127.8 0.57557 127.8 127.51 128.09 0 124 21 8 0 0 0 3.8087E-06 2 77005 91.207 91.207 1 1.6617 1.4166 0 8935500 3785700 5149800 27227 1183 10261 10546 42649;42650 42650 NTIEMQAITALAHLR 15 0 1 Unmodified _NTIEMQAITALAHLR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 846.461 2 841.456339 1680.89812 66518.41 0.86921 0.0007314 0.054749 4.6069E-05 0.92396 0.00077747 841.457318355922 846.460604050328 127.8 0.5036 127.8 127.54 128.04 0 104 18 8 0 0 0 0.0025608 1 76986 56.951 56.951 1 1.6939 1.4501 0 6004600 1988000 4016600 27228 1183 10261 10546 42651 42651 NTIEMQAITALAHLR 15 0 1 Unmodified _NTIEMQAITALAHLR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.3075 3 561.306651 1680.89812 79674.34 0.7034 0.00039482 -0.25586 -0.00014362 0.44753 0.0002512 561.306471404529 564.642604080371 127.48 0.4817 127.48 127.28 127.76 0 113 19 9 0 0 0 6.8994E-05 2 75879 70.197 70.197 1 1.6288 1.3156 0 10808000 4190800 6616800 27229 1183 10261 10546 42652;42653 42653 NTLCAPEVISLINTR 15 0 1 Unmodified _NTLCAPEVISLINTR_ 0 0 0 Q96CS3 Q96CS3 Q96CS3 FAF2 FAS-associated factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.9604 2 850.953629 1699.8927 66571.84 0.66541 0.00056623 -0.20551 -0.00017488 0.4599 0.00039135 850.954521561323 855.957919750877 115.32 0.40913 115.32 115.17 115.58 0 112 26 6 0 0 0 0.00010156 1 73341 82.362 68.934 1 1.3006 1.2976 0 8726800 3983600 4743200 27230 1961 10262 10547 42654 42654 NTLCAPEVISLINTR 15 0 1 Unmodified _NTLCAPEVISLINTR_ 0 0 0 Q96CS3 Q96CS3 Q96CS3 FAF2 FAS-associated factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.9575 2 850.953629 1699.8927 66689.73 0.88359 0.00075189 -0.51881 -0.00044148 0.36478 0.00031041 851.454526189117 855.957835445231 114.81 0.38484 114.81 114.61 115 0 104 23 6 0 0 0 4.9248E-07 1 74836 102.62 87.745 1 1.3876 1.3705 0 14983000 6090600 8892500 27231 1961 10262 10547 42655 42655 NTLQLHR 7 0 1 Unmodified _NTLQLHR_ 0 0 0 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2549 2 441.251226 880.487899 89952.77 0.1284 5.6658E-05 -0.36802 -0.00016239 -0.23962 -0.00010573 441.251076720185 446.255183576269 21.65 0.78296 21.65 21.258 22.04 0 262 44 10 0 0 0 0.020094 1 7777 94.407 29.631 1 0.89249 1.0583 0 591590000 307890000 283700000 27232 121 10263 10548 42656 42656 NTLQLHR 7 0 1 Unmodified _NTLQLHR_ 0 0 0 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2511 2 441.251226 880.487899 89450.87 -0.16537 -7.2969E-05 -0.29177 -0.00012874 -0.45714 -0.00020171 441.251248520665 446.255217477512 21.445 0.55935 21.445 21.203 21.762 0 182 26 10 0 0 0 1.4873E-06 3 7548 152.34 75.491 1 0.91577 1.0791 0 1137100000 621160000 515960000 27233 121 10263 10548 42657;42658;42659 42658 NTLQLHR 7 0 1 Unmodified _NTLQLHR_ 0 0 0 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 441.251 2 441.251226 880.487899 90137.7 -0.13662 -6.0285E-05 -0.66621 -0.00029397 -0.80283 -0.00035425 441.250932573189 446.255174717279 23.033 1.1862 23.033 22.376 23.562 0 167 51 6 0 0 0 0.010142 1 7157 120.65 45.928 1 0.78475 0.68486 0 73361000 38982000 34379000 27234 121 10263 10548 42660 42660 NTLTQTTENLR 11 0 1 Unmodified _NTLTQTTENLR_ 0 0 0 P15924 P15924 P15924 DSP Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.835 2 645.836048 1289.65754 75251.43 0.48994 0.00031642 1.7309 0.0011179 2.2208 0.0014343 645.836009859736 651.34402046737 52.597 0.63964 52.597 52.264 52.903 0 208 49 7 0 0 0 0.0071503 1 26006 53.124 44.169 1 1.1354 0.98424 0 2497000 1341700 1155300 27235 1486 10264 10549 42661 42661 NTMEALPACLLR 12 0 1 Oxidation (M) _NTM(ox)EALPACLLR_ NTM(1)EALPACLLR NTM(56.04)EALPACLLR 0 1 0 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3;K7ES52;K7ERJ1 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.855 2 702.852329 1403.69011 74163.95 0.48392 0.00034013 0.35218 0.00024753 0.83611 0.00058766 702.852605611494 707.856770945206 88.543 0.39384 88.543 88.396 88.79 0 77 31 4 0 0 0 0.0016657 1 53470 56.043 44.68 1 1.5512 1.6243 0 10868000 3920800 6946800 27236 252 10265 10550 42662 42662 190 NTNAAEESLPEIQK 14 1 0 Unmodified _NTNAAEESLPEIQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.3833 2 772.383559 1542.75257 69433.35 0.4591 0.0003546 -0.023558 -1.8196E-05 0.43554 0.00033641 772.383635583186 776.390659325502 58.497 0.95507 58.497 58.182 59.138 0 490 76 11 0 0 0 1.971E-30 2 33027 161.99 135.2 1 0.84015 0.99514 0 454160000 242840000 211320000 27237 2070 10266 10551 42663;42664 42664 NTNAAEESLPEIQK 14 1 0 Unmodified _NTNAAEESLPEIQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.3923 2 772.383559 1542.75257 69052.13 0.60807 0.00046966 -0.0060999 -4.7114E-06 0.60197 0.00046495 772.383683045202 776.390694620511 57.437 0.81867 57.437 57.171 57.99 0 440 66 11 0 0 0 1.7779E-57 3 33101 196.24 169.45 1 0.84819 1.0001 0 696680000 374010000 322670000 27238 2070 10266 10551 42665;42666;42667 42665 NTNAAEESLPEIQK 14 1 0 Unmodified _NTNAAEESLPEIQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.3842 2 772.383559 1542.75257 69314.23 0.66209 0.00051138 -0.20788 -0.00016057 0.4542 0.00035082 772.383607023057 776.390552167439 68.269 1.4785 68.269 67.899 69.377 0 511 105 12 0 0 0 1.3442E-29 2 35522 154.94 154.94 1 1.7214 1.4965 0 142130000 51654000 90475000 27239 2070 10266 10551 42668;42669 42669 NTNAAEESLPEIQK 14 1 0 Unmodified _NTNAAEESLPEIQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.3843 2 772.383559 1542.75257 69279.61 0.65607 0.00050674 -0.15675 -0.00012107 0.49932 0.00038567 772.383743263115 776.390557037286 68.833 1.269 68.833 68.464 69.733 0 552 88 11 0 0 0 0.0040225 2 35060 46.159 46.159 1 1.6786 1.4386 0 129540000 50342000 79195000 27240 2070 10266 10551 42670;42671 42671 NTNPNFVR 8 0 1 Unmodified _NTNPNFVR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.2504 2 481.246141 960.477728 NaN NaN NaN 0.083099 3.9991E-05 NaN NaN NaN NaN 31.072 0.54974 31.072 30.79 31.339 0 0 0 0 0.0071545 1 12597 83.377 36.31 1 NaN NaN 0 9268500 0 9268500 27241 81;1544 10267 10552 42672 42672 NTPHFNR 7 0 1 Unmodified _NTPHFNR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.2198 2 443.219926 884.425299 89959.2 -0.10279 -4.5559E-05 0.086035 3.8133E-05 -0.016757 -7.4269E-06 443.219885491901 448.224085870782 17.136 0.28613 17.136 17.021 17.307 0 24 7 5 0 0 0 0.034046 1 4358 62.978 54.825 1 1.1113 1.1436 0 19636000 8802800 10833000 27242 1740 10268 10553 42673 42673 NTPLLGQALTIASK 14 1 0 Unmodified _NTPLLGQALTIASK_ 0 0 0 Q96H22;H3BRU7 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.9246 2 713.916841 1425.81913 74523.66 0.85207 0.0006083 -0.011107 -7.9296E-06 0.84096 0.00060038 713.916769951845 717.923745294809 105.21 0.59634 105.21 104.88 105.48 0 178 45 6 0 0 0 0.0019255 2 66843 50.207 50.207 1 0.76862 0.77237 0 15990000 9361400 6628300 27243 1970 10269 10554 42674;42675 42675 NTPLLGQALTIASK 14 1 0 Unmodified _NTPLLGQALTIASK_ 0 0 0 Q96H22;H3BRU7 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.4264 2 713.916841 1425.81913 73026.47 0.90637 0.00064707 0.13644 9.741E-05 1.0428 0.00074448 713.91686984748 717.924096032172 117.72 0.47174 117.72 117.49 117.96 0 107 20 7 0 0 0 0.0038928 1 69371 46.378 46.378 1 1.0832 0.86072 0 6565200 3567800 2997400 27244 1970 10269 10554 42676 42676 NTPLLGQALTIASK 14 1 0 Unmodified _NTPLLGQALTIASK_ 0 0 0 Q96H22;H3BRU7 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.9179 2 713.916841 1425.81913 72662.47 0.59785 0.00042682 -0.021265 -1.5181E-05 0.57659 0.00041164 713.916753267212 717.923974931486 117.53 0.44328 117.53 117.28 117.73 7.6294E-06 107 20 7 0 0 0 0.0072394 2 68273 40.725 40.725 1 1.1412 0.92885 0 7230400 3572500 3657900 27245 1970 10269 10554 42677;42678 42677 NTSEESSLLTSELR 14 0 1 Unmodified _NTSEESSLLTSELR_ 0 0 0 Q9UIF8;Q3B7K5;A0A0A0MR97 Q9UIF8 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.3871 2 783.386299 1564.75804 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.432 1 81.432 80.932 81.932 0 0 0 0 0.0022937 1 48535 64.55 47.114 1 27246 2102 10270 10555 42679 42679 NTSEESSLLTSELR 14 0 1 Unmodified _NTSEESSLLTSELR_ 0 0 0 Q9UIF8;Q3B7K5;A0A0A0MR97 Q9UIF8 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.3889 2 783.386299 1564.75804 NaN NaN NaN 0.019357 1.5164E-05 NaN NaN NaN NaN 80.576 0.29831 80.576 80.341 80.639 0 0 0 0 0.00014695 2 48992 87.363 60.849 1 NaN NaN 0 4741400 4741400 0 27247 2102 10270 10555 42680;42681 42680 NTSEESSLLTSELR 14 0 1 Unmodified _NTSEESSLLTSELR_ 0 0 0 Q9UIF8;Q3B7K5;A0A0A0MR97 Q9UIF8 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 788.3921 2 783.386299 1564.75804 NaN NaN NaN 0.48203 0.00037761 NaN NaN NaN NaN 93.825 0.37377 93.825 93.628 94.002 0 0 0 0 0.012768 1 52412 50.207 32.343 1 NaN NaN 0 1507500 0 1507500 27248 2102 10270 10555 42682 42682 NTSEESSLLTSELR 14 0 1 Unmodified _NTSEESSLLTSELR_ 0 0 0 Q9UIF8;Q3B7K5;A0A0A0MR97 Q9UIF8 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.3871 2 783.386299 1564.75804 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.783 1 93.783 93.283 94.283 0 0 0 0 0.019191 1 52421 44.616 27.18 1 27249 2102 10270 10555 42683 42683 NTSEESSLLTSELR 14 0 1 Unmodified _NTSEESSLLTSELR_ 0 0 0 Q9UIF8;Q3B7K5;A0A0A0MR97 Q9UIF8 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.3878 2 783.386299 1564.75804 70095.04 0.66864 0.0005238 1.0981 0.00086023 1.7667 0.001384 784.391471230678 788.390129039984 93.762 0.48087 93.762 93.519 94 0 137 33 6 0 0 0 0.0012966 2 51568 54.7 34.396 1 1.1677 1.0091 0 2717300 1366200 1351100 27250 2102 10270 10555 42684;42685 42685 NTSELVSSEVYLLSALAALQK 21 1 0 Unmodified _NTSELVSSEVYLLSALAALQK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1123.0626 2 1118.60719 2235.19983 NaN NaN NaN 0.19344 0.00021639 NaN NaN NaN NaN 133.6 0.25635 133.6 133.44 133.7 0 0 0 0 4.534E-30 1 89845 124.16 109.81 1 NaN NaN 0 5138100 0 5138100 27251 897 10271 10556 42686 42686 NTSEQDQPMGGWEMIR 16 0 1 2 Oxidation (M) _NTSEQDQPM(ox)GGWEM(ox)IR_ NTSEQDQPM(1)GGWEM(1)IR NTSEQDQPM(99.84)GGWEM(99.84)IR 0 2 0 P20700;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.9039 2 955.904007 1909.79346 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.489 1 55.489 54.989 55.989 3.8147E-06 0 0 0 1.7816E-07 1 31197 99.844 93.872 1 27252 1502 10272 10557 42687 42687 1262;1263 NTTGSTIAEIR 11 0 1 Unmodified _NTTGSTIAEIR_ 0 0 0 H7C4X9;A0A087WYS3;Q9ULU4 H7C4X9 H7C4X9 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.8067 2 581.806759 1161.59897 78363.16 0.58713 0.0003416 1.1101 0.00064586 1.6972 0.00098745 581.806564531142 587.314308244422 42.495 0.7444 42.495 42.11 42.854 0 226 58 7 0 0 0 0.00045221 1 22542 77.379 77.379 1 1.2279 1.3899 0 104910000 48052000 56861000 27253 1317 10273 10558 42688 42688 NTTGSTIAEIR 11 0 1 Unmodified _NTTGSTIAEIR_ 0 0 0 H7C4X9;A0A087WYS3;Q9ULU4 H7C4X9 H7C4X9 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.8074 2 581.806759 1161.59897 78555.15 0.85241 0.00049594 -0.23441 -0.00013638 0.618 0.00035955 581.806927730735 586.810246654764 41.256 0.8299 41.256 40.952 41.782 0 215 70 4 0 0 0 0.00048456 1 22310 74.841 68.25 1 0.61804 0.61162 0 15387000 9172300 6214900 27254 1317 10273 10558 42689 42689 NTTGSTIAEIR 11 0 1 Unmodified _NTTGSTIAEIR_ 0 0 0 H7C4X9;A0A087WYS3;Q9ULU4 H7C4X9 H7C4X9 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.8105 2 581.806759 1161.59897 82270.04 0.37859 0.00022026 0.13323 7.7512E-05 0.51181 0.00029778 581.807042389877 586.810703449137 49.147 0.66028 49.147 48.787 49.448 0 169 53 5 0 0 0 0.011299 2 23990 48.44 41.399 1 1.545 1.3225 0 2747500 1114200 1633200 27255 1317 10273 10558 42690;42691 42690 NTTGSTIAEIR 11 0 1 Unmodified _NTTGSTIAEIR_ 0 0 0 H7C4X9;A0A087WYS3;Q9ULU4 H7C4X9 H7C4X9 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.8113 2 581.806759 1161.59897 80410.3 0.18028 0.00010489 -0.03565 -2.0742E-05 0.14463 8.4145E-05 581.806928213894 586.810675740821 49.379 0.68753 49.379 49.061 49.748 0 158 52 4 0 0 0 0.02351 1 23664 42.21 36.885 1 1.6223 1.3837 0 2914400 965040 1949300 27256 1317 10273 10558 42692 42692 NTTGVTEEALK 11 1 0 Unmodified _NTTGVTEEALK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.8087 2 581.801143 1161.58773 86753.6 0.69046 0.00040171 -0.03052 -1.7757E-05 0.65994 0.00038396 581.801479639958 585.80799771181 35.655 0.5258 35.655 35.423 35.949 0 134 49 4 0 0 0 0.017732 2 17961 45.158 23.694 1 1.5409 1.6317 0 15673000 5860400 9812200 27257 523 10274 10559 42693;42694 42694 NTTGVTEEALK 11 1 0 Unmodified _NTTGVTEEALK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.8096 2 581.801143 1161.58773 81984.52 0.74342 0.00043252 -0.099197 -5.7713E-05 0.64422 0.00037481 581.801235785384 585.808043243935 34.79 0.30714 34.79 34.645 34.952 0 108 25 6 0 0 0 0.0071503 1 17606 53.124 24.915 1 1.5388 1.5651 0 30330000 10871000 19459000 27258 523 10274 10559 42695 42695 NTTQNTGYSSGTQNANYPVR 20 0 1 Unmodified _NTTQNTGYSSGTQNANYPVR_ 0 0 0 Q4KMR3;Q12965 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1087.5007 2 1086.99887 2171.98319 59802.05 0.2671 0.00029033 0.091221 9.9157E-05 0.35832 0.00038949 1087.50050818939 1092.00300057014 37.109 0.32655 37.109 36.967 37.293 0 116 28 6 0 0 0 4.4853E-10 3 18855 99.481 92.441 1 0.95249 0.95278 0 16869000 8201400 8667400 27259 1703 10275 10560 42696;42697;42698 42698 NTTQNTGYSSGTQNANYPVR 20 0 1 Unmodified _NTTQNTGYSSGTQNANYPVR_ 0 0 0 Q4KMR3;Q12965 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1087.502 2 1086.99887 2171.98319 59149.31 0.33883 0.00036831 0.0025145 2.7333E-06 0.34135 0.00037104 1086.99887902572 1092.50397641835 36.171 0.33028 36.171 36.013 36.344 0 130 27 7 0 0 0 1.16E-12 3 18503 101.62 94.254 1 1.0086 1.032 0 20896000 9409800 11486000 27260 1703 10275 10560 42699;42700;42701 42700 NTTWEDVGLWDPSLTK 16 1 0 Unmodified _NTTWEDVGLWDPSLTK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.9531 2 931.451973 1860.88939 NaN NaN NaN -0.082624 -7.696E-05 NaN NaN NaN NaN 116.73 0.39334 116.73 116.53 116.92 -7.6294E-06 0 0 0 0.010209 1 74630 65.295 58.911 1 NaN NaN 0 7797800 7797800 0 27261 878 10276 10561 42702 42702 NTTWEDVGLWDPSLTK 16 1 0 Unmodified _NTTWEDVGLWDPSLTK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 935.9599 2 931.451973 1860.88939 63549.02 1.1723 0.001092 0.14182 0.0001321 1.3141 0.0012241 931.952154646127 935.459407524911 128.28 0.60849 128.28 128.04 128.65 0 109 25 8 0 0 0 0.00024466 1 77396 57.804 52.42 1 2.0843 1.6466 0 5223700 1326300 3897500 27262 878 10276 10561 42703 42703 NTTWEDVGLWDPSLTK 16 1 0 Unmodified _NTTWEDVGLWDPSLTK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 935.459 2 931.451973 1860.88939 62523.59 0.73149 0.00068135 0.23169 0.00021581 0.96318 0.00089715 931.953618960159 935.960163671629 128.09 0.55394 128.09 127.84 128.4 0 100 23 8 0 0 0 0.0029307 1 76382 38.787 33.508 1 1.9473 1.5923 0 5540700 2026400 3514300 27263 878 10276 10561 42704 42704 NTVANSPQTLLAGMNK 16 1 0 Oxidation (M) _NTVANSPQTLLAGM(ox)NK_ NTVANSPQTLLAGM(1)NK NTVANSPQTLLAGM(75.48)NK 0 1 0 P61221 P61221 P61221 ABCE1 ATP-binding cassette sub-family E member 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 841.9384 2 837.927611 1673.84067 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.534 1 63.534 63.034 64.034 0 0 0 0 0.00030349 1 37354 75.479 56.733 1 27264 1628 10277 10562 42705 42705 1412 NTVEITELPVR 11 0 1 Unmodified _NTVEITELPVR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.8586 2 635.853709 1269.69287 76025.26 0.82176 0.00052252 0.21811 0.00013869 1.0399 0.00066121 635.853753864381 640.857677698792 85.152 1.0983 85.152 84.549 85.647 0 405 90 8 0 0 0 0.00010563 1 50949 96.89 81.952 1 0.57037 0.66138 0 172040000 108950000 63095000 27265 1679 10278 10563 42706 42706 NTVEITELPVR 11 0 1 Unmodified _NTVEITELPVR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.8591 2 635.853709 1269.69287 NaN NaN NaN 0.30412 0.00019338 NaN NaN NaN NaN 84.163 0.85783 84.163 83.754 84.611 0 0 0 0 0.002707 1 51468 72.006 41.442 1 NaN NaN 0 51532000 0 51532000 27266 1679 10278 10563 42707 42707 NTVEITELPVR 11 0 1 Unmodified _NTVEITELPVR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.854 2 635.853709 1269.69287 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.586 1 84.586 84.086 85.086 0 0 0 0 0.0073026 1 51957 75.387 53.301 1 27267 1679 10278 10563 42708 42708 NTVEITELPVR 11 0 1 Unmodified _NTVEITELPVR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.8589 2 635.853709 1269.69287 76353.14 0.64821 0.00041217 0.27162 0.00017271 0.91983 0.00058488 635.853776227596 640.85785975698 97.632 1.0078 97.632 97.203 98.21 0 281 62 8 0 0 0 6.6214E-06 2 54806 110.14 99.306 1 0.98056 0.82118 0 24937000 13796000 11142000 27268 1679 10278 10563 42709;42710 42709 NTVEITELPVR 11 0 1 Unmodified _NTVEITELPVR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.8594 2 635.853709 1269.69287 76463.83 0.45577 0.0002898 0.49155 0.00031255 0.94732 0.00060236 635.853844502 640.85795968904 97.436 0.84863 97.436 97.055 97.904 0 229 46 8 0 0 0 6.8436E-08 1 53876 114.5 103.67 1 1.0171 0.88725 0 27231000 13426000 13804000 27269 1679 10278 10563 42711 42711 NTVGNVPLEWYDDFPHVGYDLDGR 24 0 1 Unmodified _NTVGNVPLEWYDDFPHVGYDLDGR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 926.7662 3 926.764663 2777.27216 65444.02 0.78499 0.0007275 0.050876 4.715E-05 0.83586 0.00077465 927.098720277969 930.769711136066 122.35 0.7168 122.35 121.95 122.66 0 247 51 7 0 0 0 4.4597E-09 4 79092 49.871 49.871 1 0.64787 0.64951 0 9085200 5160000 3925200 27270 1726 10279 10564 42712;42713;42714;42715 42712 NTVGNVPLEWYDDFPHVGYDLDGR 24 0 1 Unmodified _NTVGNVPLEWYDDFPHVGYDLDGR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.7643 3 926.764663 2777.27216 64812.56 0.61247 0.00056761 -0.010372 -9.6128E-06 0.60209 0.000558 927.098847502958 930.435271922724 121.74 0.6644 121.74 121.45 122.11 0 265 48 8 0 0 0 1.3984E-06 3 80617 47.728 47.728 1 0.72749 0.71616 0 14498000 8653900 5843800 27271 1726 10279 10564 42716;42717;42718 42717 NTVGNVPLEWYDDFPHVGYDLDGR 24 0 1 Unmodified _NTVGNVPLEWYDDFPHVGYDLDGR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 927.0997 3 926.764663 2777.27216 63782.57 1.1177 0.0010358 -0.27652 -0.00025627 0.84116 0.00077955 927.099082327053 930.768506009679 134.12 0.49557 134.12 133.81 134.3 0 115 21 10 0 0 0 0.00060487 1 81842 30.925 30.925 1 1.2765 1.0463 0 12660000 5800600 6859600 27272 1726 10279 10564 42719 42719 NTVGNVPLEWYDDFPHVGYDLDGR 24 0 1 Unmodified _NTVGNVPLEWYDDFPHVGYDLDGR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 930.437 3 926.764663 2777.27216 63793.07 1.0616 0.00098388 0.28901 0.00026784 1.3506 0.0012517 927.099285601083 930.435194812059 133.97 0.40611 133.97 133.8 134.21 0 132 20 9 0 0 0 7.5244E-05 2 80755 36.256 36.256 1 1.1335 0.92915 0 8876000 4071800 4804200 27273 1726 10279 10564 42720;42721 42720 NTVLATWQPYTTSK 14 1 0 Unmodified _NTVLATWQPYTTSK_ 0 0 0 Q9BY44;C9IZE1;F8WAE5;H7C5Q3 Q9BY44 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.4244 2 805.414662 1608.81477 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.094 1 86.094 85.594 86.594 0 0 0 0 0.0017963 1 51794 69.451 50.705 1 27274 2017 10280 10565 42722 42722 NTVLQQHLETLR 12 0 1 Unmodified _NTVLQQHLETLR_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2729 3 484.603685 1450.78923 85286.52 0.15914 7.7118E-05 -0.12097 -5.8621E-05 0.038171 1.8498E-05 484.603690873205 487.940001288624 60.106 0.45481 60.106 59.804 60.259 3.8147E-06 119 39 5 0 0 0 0.00024878 2 34224 63.76 63.76 1 0.9186 0.92083 0 16211000 10225000 5985800 27275 1005 10281 10566 42723;42724 42723 NTVLQQHLETLR 12 0 1 Unmodified _NTVLQQHLETLR_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.6034 3 484.603685 1450.78923 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.013 1 60.013 59.513 60.513 0 0 0 0 0.025116 1 34237 58.487 34.659 1 27276 1005 10281 10566 42725 42725 NTVLQQHLETLR 12 0 1 Unmodified _NTVLQQHLETLR_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.408 2 726.401889 1450.78923 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.136 1 60.136 59.636 60.636 3.8147E-06 0 0 0 0.023417 1 34306 49.5 24.115 1 27277 1005 10281 10566 42726 42726 NTVLQQHLETLR 12 0 1 Unmodified _NTVLQQHLETLR_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.604 3 484.603685 1450.78923 87523.7 0.29534 0.00014312 0.0048148 2.3333E-06 0.30016 0.00014546 484.60353732291 487.939784764415 58.149 0.49259 58.149 57.99 58.482 3.8147E-06 123 35 6 0 0 0 6.3255E-05 1 33713 79.875 79.875 1 0.75549 0.8234 0 29406000 17164000 12242000 27278 1005 10281 10566 42727 42727 NTVLQQHLETLR 12 0 1 Unmodified _NTVLQQHLETLR_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.4033 2 726.401889 1450.78923 73252.45 0.6047 0.00043925 0.73614 0.00053473 1.3408 0.00097399 726.402836321246 731.406142723184 58.122 0.2355 58.122 58.022 58.257 0 52 17 5 0 0 0 0.00013656 1 33732 115 115 1 1.1209 1.1335 0 9522100 4633300 4888700 27279 1005 10281 10566 42728 42728 NTVLQQHLETLR 12 0 1 Unmodified _NTVLQQHLETLR_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.9397 3 484.603685 1450.78923 87046.58 0.055463 2.6878E-05 0.27195 0.00013179 0.32742 0.00015867 484.603656331956 487.939909803529 69.256 0.32998 69.256 69.105 69.434 0 83 20 6 0 0 0 0.0010145 2 36264 59.155 59.155 1 0.88208 0.74343 0 3043600 1621000 1422700 27280 1005 10281 10566 42729;42730 42729 NTVLQQHLETLR 12 0 1 Unmodified _NTVLQQHLETLR_ 0 0 0 B4DMG1;Q9NP66;H0YKL0 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.94 3 484.603685 1450.78923 86646.18 0.27408 0.00013282 -0.20028 -9.7054E-05 0.073804 3.5766E-05 484.60342677965 487.939837816261 69.704 0.31181 69.704 69.539 69.851 -7.6294E-06 81 21 5 0 0 0 0.026522 2 35743 25.53 25.53 1 0.99769 0.85338 0 2869800 1317500 1552200 27281 1005 10281 10566 42731;42732 42731 NTVVATGGYGR 11 0 1 Unmodified _NTVVATGGYGR_ 0 0 0 D6RFM5;A0A024QZ30;B4DYN5;P31040;Q0QF12;B3KT34 D6RFM5 D6RFM5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.7836 2 547.783087 1093.55162 NaN NaN NaN 0.57943 0.0003174 NaN NaN NaN NaN 28.933 0.19434 28.933 28.829 29.023 0 0 0 0 0.00042743 1 13847 105.4 72.556 1 NaN NaN 0 10924000 10924000 0 27282 10 10282 10567 42733 42733 NTVVATGGYGR 11 0 1 Unmodified _NTVVATGGYGR_ 0 0 0 D6RFM5;A0A024QZ30;B4DYN5;P31040;Q0QF12;B3KT34 D6RFM5 D6RFM5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.7831 2 547.783087 1093.55162 82627.43 0.58839 0.00032231 -1.4683 -0.00080432 -0.87992 -0.000482 547.783011494149 553.28482538728 28.157 0.1853 28.157 28.076 28.261 0 23 7 5 0 0 0 0.00034479 1 13401 85.807 62.379 1 0.86753 0.95819 0 41747000 21841000 19907000 27283 10 10282 10567 42734 42734 NTVVLFVPQQEAWVVER 17 0 1 Unmodified _NTVVLFVPQQEAWVVER_ 0 0 0 Q9UJZ1 Q9UJZ1 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1012.5491 2 1007.54146 2013.06836 64297.95 0.65108 0.00065599 0.011008 1.1091E-05 0.66209 0.00066708 1008.04217055938 1012.54705192436 119.29 0.40485 119.29 119.13 119.54 -7.6294E-06 104 28 6 0 0 0 0.00012158 1 78637 57.802 52.648 1 0.90102 0.90039 0 9035600 5365800 3669900 27284 2104 10283 10568 42735 42735 NTWLYQALR 9 0 1 Unmodified _NTWLYQALR_ 0 0 0 Q5SQP8;P56545;A0A087WYL1 Q5SQP8 Q5SQP8 CTBP2 C-terminal-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8159 2 582.811648 1163.60874 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.011 1 91.011 90.511 91.511 0 0 0 0 0.030931 1 56322 52.716 27.793 1 27285 1620 10284 10569 42736 42736 NTYQGFNGMDR 11 0 1 Oxidation (M) _NTYQGFNGM(ox)DR_ NTYQGFNGM(1)DR NTYQGFNGM(43.51)DR 0 1 0 Q5BKZ1;A0A0A0MRN4;E2QRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.8262 2 659.777676 1317.5408 75227.42 0.63197 0.00041696 0.86995 0.00057398 1.5019 0.00099093 659.778403292046 664.782026100586 26.592 0.26014 26.592 26.485 26.745 0 31 12 4 0 0 0 0.010154 1 12003 43.512 41.909 1 1.551 1.5526 0 6855600 2859900 3995700 27286 1804 10285 10570 42737 42737 1672 NVAEALGHSPK 11 1 0 Unmodified _NVAEALGHSPK_ 0 0 0 B2RCD8;Q8IU81 B2RCD8 B2RCD8 IRF2BP1 Interferon regulatory factor 2-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8062 2 561.798737 1121.58292 NaN NaN NaN 0.22066 0.00012396 NaN NaN NaN NaN 25.165 0.24264 25.165 25.062 25.304 0 0 0 0 0.0056298 1 10853 64.654 38.052 1 NaN NaN 0 11532000 0 11532000 27287 882 10286 10571 42738 42738 NVAIFTAGQESPIILR 16 0 1 Unmodified _NVAIFTAGQESPIILR_ 0 0 0 E7EMW7;O95071 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.4854 2 864.985786 1727.95702 67061.33 1.032 0.00089266 -2.6483 -0.0022907 -1.6163 -0.0013981 865.483429507338 869.989476988075 113.93 0.67587 113.93 113.55 114.23 0 163 48 6 0 0 0 0.000279 1 72277 56.205 56.205 1 1.0771 1.0683 0 8257500 3419900 4837600 27288 1218 10287 10572 42739 42739 NVAIFTAGQESPIILR 16 0 1 Unmodified _NVAIFTAGQESPIILR_ 0 0 0 E7EMW7;O95071 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.9902 2 864.985786 1727.95702 66791 0.62675 0.00054213 0.090332 7.8136E-05 0.71708 0.00062026 864.985586685088 869.990294258976 125.3 0.41324 125.3 125.11 125.52 0 48 14 5 0 0 0 0.0068391 1 75247 35.204 35.204 1 0.77593 0.67374 0 2331700 1193700 1138000 27289 1218 10287 10572 42740 42740 NVAIFTAGQESPIILR 16 0 1 Unmodified _NVAIFTAGQESPIILR_ 0 0 0 E7EMW7;O95071 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 865.4883 2 864.985786 1727.95702 67112.59 0.56062 0.00048493 0.48996 0.00042381 1.0506 0.00090874 864.985718446926 870.49284757942 125.11 0.42348 125.11 124.95 125.38 0 65 17 6 0 0 0 0.001001 2 74210 47.062 47.062 1 0.93372 0.83119 0 1945300 966510 978800 27290 1218 10287 10572 42741;42742 42742 NVALLSQLYHSPAR 14 0 1 Unmodified _NVALLSQLYHSPAR_ 0 0 0 Q15717 Q15717 Q15717 ELAVL1 ELAV-like protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.9382 2 784.930814 1567.84708 NaN NaN NaN -0.40189 -0.00031546 NaN NaN NaN NaN 86.471 0.83562 86.471 86 86.835 0 0 0 0 0.00012652 1 51937 88.187 66.814 1 NaN NaN 0 15918000 0 15918000 27291 1764 10288 10573 42743 42743 NVALLSQLYHSPAR 14 0 1 Unmodified _NVALLSQLYHSPAR_ 0 0 0 Q15717 Q15717 Q15717 ELAVL1 ELAV-like protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.9341 2 784.930814 1567.84708 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.84 1 86.84 86.34 87.34 0 0 0 0 0.010378 1 52362 51.286 28.645 1 27292 1764 10288 10573 42744 42744 NVALLSQLYHSPAR 14 0 1 Unmodified _NVALLSQLYHSPAR_ 0 0 0 Q15717 Q15717 Q15717 ELAVL1 ELAV-like protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.9351 2 784.930814 1567.84708 NaN NaN NaN -0.89565 -0.00070303 NaN NaN NaN NaN 84.835 0.76686 84.835 84.653 85.42 -7.6294E-06 0 0 0 6.5573E-15 1 52080 121.04 85.53 1 NaN NaN 0 13193000 0 13193000 27293 1764 10288 10573 42745 42745 NVASVCLQIGYPTVASVPHSIINGYK 26 1 0 Unmodified _NVASVCLQIGYPTVASVPHSIINGYK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;F8VZS0;B4E3D5;F8W1K8;Q3MHV2 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 932.8279 3 929.821455 2786.44254 63849.16 0.84915 0.00078956 0.86281 0.00080226 1.712 0.0015918 930.49101424668 932.827560895788 115.06 0.35281 115.06 114.92 115.27 0 120 22 8 0 0 0 0.017207 1 73211 19.25 16.601 1 0.75421 0.75099 0 19005000 10139000 8866600 27294 345 10289 10574 42746 42746 NVASVCLQIGYPTVASVPHSIINGYK 26 1 0 Unmodified _NVASVCLQIGYPTVASVPHSIINGYK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;F8VZS0;B4E3D5;F8W1K8;Q3MHV2 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 932.8292 3 929.821455 2786.44254 63617.59 0.63005 0.00058583 0.58132 0.00054052 1.2114 0.0011264 930.156120603509 932.827478494734 114.55 0.42409 114.55 114.3 114.73 -7.6294E-06 153 27 10 0 0 0 1.2385E-13 1 74493 77.053 77.053 1 0.97752 0.9866 0 28349000 14353000 13995000 27295 345 10289 10574 42747 42747 NVASVCLQIGYPTVASVPHSIINGYK 26 1 0 Unmodified _NVASVCLQIGYPTVASVPHSIINGYK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;F8VZS0;B4E3D5;F8W1K8;Q3MHV2 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 930.1572 3 929.821455 2786.44254 62538.29 0.87714 0.00081558 -0.0084819 -7.8867E-06 0.86866 0.0008077 930.15567050067 932.827155510148 126.53 0.59814 126.53 126.18 126.78 -7.6294E-06 94 20 11 0 0 0 0.00066716 2 76164 27.89 27.89 1 0.89463 0.71784 0 8128400 4035800 4092600 27296 345 10289 10574 42748;42749 42748 NVASVCLQIGYPTVASVPHSIINGYK 26 1 0 Unmodified _NVASVCLQIGYPTVASVPHSIINGYK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;F8VZS0;B4E3D5;F8W1K8;Q3MHV2 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 930.1564 3 929.821455 2786.44254 63699.67 0.53156 0.00049425 -0.23279 -0.00021646 0.29876 0.0002778 930.155816274286 933.161260634135 126.49 0.76805 126.49 125.85 126.61 0 166 33 11 0 0 0 1.5757E-06 2 75202 44.711 44.711 1 0.80062 0.64282 0 14456000 8393300 6062600 27297 345 10289 10574 42750;42751 42751 NVDEAINFINER 12 0 1 Unmodified _NVDEAINFINER_ 0 0 0 J3QRD1;Q59H65;P51648;Q68D64;J3KTD9;I3L2W1 J3QRD1 J3QRD1 ALDH3A2;DKFZp686E23276 Fatty aldehyde dehydrogenase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.3541 2 717.354605 1432.69466 NaN NaN NaN -0.76029 -0.0005454 NaN NaN NaN NaN 89.943 0.56503 89.943 89.642 90.207 -7.6294E-06 0 0 0 5.318E-05 2 55535 106.49 95.132 1 NaN NaN 0 9224300 9224300 0 27298 1338 10290 10575 42752;42753 42752 NVDELSSLQSSADTSSSRPGSR 22 0 2 Unmodified _NVDELSSLQSSADTSSSRPGSR_ 0 0 1 Q92610 Q92610 Q92610 ZNF592 Zinc finger protein 592 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.6966 3 760.694796 2279.06256 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.494 1 53.494 52.994 53.994 0 0 0 0 0.0016001 1 29931 44.729 20.929 1 27299 1948 10291 10576 42754 42754 NVDELSSLQSSADTSSSRPGSR 22 0 2 Unmodified _NVDELSSLQSSADTSSSRPGSR_ 0 0 1 Q92610 Q92610 Q92610 ZNF592 Zinc finger protein 592 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.0292 3 760.694796 2279.06256 NaN NaN NaN 1.0397 0.00079093 NaN NaN NaN NaN 52.411 0.33324 52.411 52.235 52.569 0 0 0 0 0.010828 2 29884 34.346 26.159 1 NaN NaN 0 4999600 4999600 0 27300 1948 10291 10576 42755;42756 42755 NVDLLSDMVQEHDEPILK 18 1 0 Oxidation (M) _NVDLLSDM(ox)VQEHDEPILK_ NVDLLSDM(1)VQEHDEPILK NVDLLSDM(75.56)VQEHDEPILK 0 1 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.6831 3 704.349021 2110.02524 71605.69 1.1598 0.00081691 -0.042556 -2.9975E-05 1.1172 0.00078693 704.68327692442 707.354724943458 91.042 1.0457 91.042 90.533 91.579 7.6294E-06 386 85 7 0 0 0 4.0185E-06 2 54804 75.564 75.564 1 1.2891 1.4856 0 213270000 81972000 131300000 27301 332 10292 10577 42757;42758 42757 251 NVDLLSDMVQEHDEPILK 18 1 0 Oxidation (M) _NVDLLSDM(ox)VQEHDEPILK_ NVDLLSDM(1)VQEHDEPILK NVDLLSDM(42.21)VQEHDEPILK 0 1 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1056.5214 2 1056.01989 2110.02524 59635.23 1.098 0.0011595 0.25505 0.00026934 1.353 0.0014288 1056.52074151179 1060.5290054635 90.897 0.24994 90.897 90.75 91 0 58 19 5 0 0 0 0.013835 1 54866 42.209 29.827 1 1.3404 1.3276 0 25842000 11531000 14311000 27302 332 10292 10577 42759 42759 251 NVDLLSDMVQEHDEPILK 18 1 0 Oxidation (M) _NVDLLSDM(ox)VQEHDEPILK_ NVDLLSDM(1)VQEHDEPILK NVDLLSDM(77.87)VQEHDEPILK 0 1 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.6846 3 704.349021 2110.02524 71715.2 0.87774 0.00061824 -0.21504 -0.00015146 0.6627 0.00046677 704.348928723689 707.354776667216 90.231 1.003 90.231 89.666 90.669 0 714 88 10 0 0 0 3.2432E-06 1 55490 77.871 69.974 1 1.3352 1.5461 0 209260000 87365000 121890000 27303 332 10292 10577 42760 42760 251 NVDLLSDMVQEHDEPILK 18 1 0 Oxidation (M) _NVDLLSDM(ox)VQEHDEPILK_ NVDLLSDM(1)VQEHDEPILK NVDLLSDM(55.2)VQEHDEPILK 0 1 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1060.0273 2 1056.01989 2110.02524 60432.29 0.71052 0.00075032 -0.80458 -0.00084966 -0.094066 -9.9336E-05 1056.52057968842 1060.02618114683 90.214 0.68482 90.214 89.823 90.507 0 235 61 6 0 0 0 2.8766E-05 2 55746 55.196 50.659 1 1.4609 1.603 0 41298000 15723000 25574000 27304 332 10292 10577 42761;42762 42761 251 NVDLLSDMVQEHDEPILK 18 1 0 Oxidation (M) _NVDLLSDM(ox)VQEHDEPILK_ NVDLLSDM(1)VQEHDEPILK NVDLLSDM(61.76)VQEHDEPILK 0 1 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.0204 3 704.349021 2110.02524 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.24 1 121.24 120.74 121.74 -7.6294E-06 0 0 0 5.7121E-05 1 72128 61.757 52.66 1 27305 332 10292 10577 42763 42763 251 NVDLLSDMVQEHDEPILK 18 1 0 Oxidation (M) _NVDLLSDM(ox)VQEHDEPILK_ NVDLLSDM(1)VQEHDEPILK NVDLLSDM(68.13)VQEHDEPILK 0 1 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.684 3 704.349021 2110.02524 71673.63 0.69893 0.00049229 -0.47442 -0.00033416 0.22451 0.00015813 704.683157599594 707.020215031257 104.18 1.1716 104.18 103.63 104.8 0 455 75 11 0 0 0 1.5378E-06 1 59050 68.129 68.129 1 0.95891 0.77933 0 28725000 15290000 13435000 27306 332 10292 10577 42764 42764 251 NVDLLSDMVQEHDEPILK 18 1 0 Oxidation (M) _NVDLLSDM(ox)VQEHDEPILK_ NVDLLSDM(1)VQEHDEPILK NVDLLSDM(75.68)VQEHDEPILK 0 1 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.6833 3 704.349021 2110.02524 71403.99 0.38884 0.00027388 -0.035765 -2.5191E-05 0.35307 0.00024869 704.683423890025 707.35454359821 103.82 1.0421 103.82 103.37 104.42 0 395 69 10 0 0 0 2.7004E-10 1 58097 75.682 75.682 1 0.96445 0.77269 0 20046000 10595000 9451600 27307 332 10292 10577 42765 42765 251 NVDLLSDMVQEHDEPILK 18 1 0 Unmodified _NVDLLSDMVQEHDEPILK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.3336 3 699.017383 2094.03032 73263 1.1921 0.0008333 -0.013981 -9.7727E-06 1.1781 0.00082352 699.35151343671 702.023135146749 110.44 0.49606 110.44 110.24 110.74 0 98 36 4 0 0 0 0.00039945 1 69380 58.024 54.148 1 0.66995 0.66179 0 25495000 12850000 12645000 27308 332 10292 10578 42766 42766 NVDLLSDMVQEHDEPILK 18 1 0 Unmodified _NVDLLSDMVQEHDEPILK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.3317 3 699.017383 2094.03032 74033.49 0.95454 0.00066724 -0.014812 -1.0354E-05 0.93973 0.00065689 699.351643465455 702.022926544021 109.87 0.50764 109.87 109.6 110.11 0 117 32 5 0 0 0 5.3808E-06 1 70577 66.779 62.428 1 0.84009 0.89607 0 20903000 8938100 11965000 27309 332 10292 10578 42767 42767 NVDLLSDMVQEHDEPILK 18 1 0 Unmodified _NVDLLSDMVQEHDEPILK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.0236 3 699.017383 2094.03032 72543 0.80025 0.00055939 -0.37501 -0.00026214 0.42524 0.00029725 699.017597732982 702.023152836624 121.33 1.2234 121.33 120.91 122.14 0 312 55 9 0 0 0 8.0214E-17 3 72126 104.61 100.88 1 1.2803 1.0507 0 37375000 15125000 22250000 27310 332 10292 10578 42768;42769;42770 42769 NVDLLSDMVQEHDEPILK 18 1 0 Unmodified _NVDLLSDMVQEHDEPILK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1052.0343 2 1048.02244 2094.03032 59724.68 0.49888 0.00052284 -0.15031 -0.00015753 0.34856 0.0003653 1049.02545229441 1052.02988824414 121.32 0.68278 121.32 121.12 121.81 0 67 32 6 0 0 0 0.002412 1 72137 35.803 35.803 1 2.0769 1.6467 0 4313200 1419900 2893300 27311 332 10292 10578 42771 42771 NVDLLSDMVQEHDEPILK 18 1 0 Unmodified _NVDLLSDMVQEHDEPILK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.0233 3 699.017383 2094.03032 72047.94 0.72553 0.00050716 -0.26082 -0.00018232 0.46471 0.00032484 699.017659699199 702.023224899576 121.11 1.2932 121.11 120.69 121.99 7.6294E-06 346 61 10 0 0 0 2.2546E-08 2 71037 88.264 80.691 1 1.4635 1.205 0 28681000 10236000 18445000 27312 332 10292 10578 42772;42773 42772 NVDMLSELVQEYDEPILK 18 1 0 Oxidation (M) _NVDM(ox)LSELVQEYDEPILK_ NVDM(1)LSELVQEYDEPILK NVDM(46.48)LSELVQEYDEPILK 0 1 0 A8MXH2;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733;H0YCI4 A8MXH2 A8MXH2 NAP1L4 Nucleosome assembly protein 1-like 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1080.5339 2 1076.02993 2150.0453 NaN NaN NaN -0.28022 -0.00030153 NaN NaN NaN NaN 124.11 0.172 124.11 124 124.18 0 0 0 0 0.0015077 1 82495 46.481 40.639 1 NaN NaN 0 3025200 0 3025200 27313 359 10293 10579 42774 42774 268 NVEDFLALTGIESADK 16 1 0 Unmodified _NVEDFLALTGIESADK_ 0 0 0 B4DZG2;A0A024R8C1;Q15361;A0A087WY09 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.9366 2 861.433249 1720.85195 66373.54 0.66977 0.00057696 0.48516 0.00041793 1.1549 0.00099489 861.433384888123 865.440741591865 122.75 0.52143 122.75 122.53 123.05 7.6294E-06 171 37 6 0 0 0 1.152E-06 2 79454 96.464 96.464 1 1.0312 1.0542 0 13130000 6314500 6816000 27314 247 10294 10580 42775;42776 42776 NVEDFLALTGIESADK 16 1 0 Unmodified _NVEDFLALTGIESADK_ 0 0 0 B4DZG2;A0A024R8C1;Q15361;A0A087WY09 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.4405 2 861.433249 1720.85195 65929.43 0.77585 0.00066835 0.81542 0.00070243 1.5913 0.0013708 861.433761160924 865.440756938636 122.36 0.52339 122.36 122.08 122.6 0 183 40 6 0 0 0 0.00015499 1 81051 71.548 71.548 1 1.0327 1.0415 0 16237000 8618600 7618200 27315 247 10294 10580 42777 42777 NVEDFLALTGIESADK 16 1 0 Unmodified _NVEDFLALTGIESADK_ 0 0 0 B4DZG2;A0A024R8C1;Q15361;A0A087WY09 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 865.6675 2 861.433249 1720.85195 65875.66 0.59528 0.00051279 -0.057657 -4.9668E-05 0.53762 0.00046312 861.934968658648 865.439980517628 134.41 0.19623 134.41 134.28 134.47 0 29 7 6 0 0 0 0.0002226 1 81105 58.831 53.338 1 2.0972 1.715 0 12628000 4442100 8186100 27316 247 10294 10580 42778 42778 NVEEIVVK 8 1 0 Unmodified _NVEEIVVK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2689 2 465.26875 928.522947 NaN NaN NaN 0.40273 0.00018738 NaN NaN NaN NaN 48.843 0.38049 48.843 48.714 49.095 3.8147E-06 0 0 0 0.033237 1 27346 57.281 28.383 1 NaN NaN 0 46321000 46321000 0 27317 897 10295 10581 42779 42779 NVELFIATSQK 11 1 0 Unmodified _NVELFIATSQK_ 0 0 0 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.8461 2 625.342978 1248.6714 NaN NaN NaN -0.45664 -0.00028556 NaN NaN NaN NaN 95.601 0.60809 95.601 95.306 95.914 0 0 0 0 0.0021492 1 52693 77.379 53.036 1 NaN NaN 0 1697400 1697400 0 27318 491 10296 10582 42780 42780 NVELTEVGPR 10 0 1 Unmodified _NVELTEVGPR_ 0 0 0 H0Y714;Q96G21;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.299 2 557.29857 1112.58259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.91 1 64.91 64.41 65.41 0 0 0 0 0.045382 1 32738 45.161 14.907 1 27319 1286 10297 10583 42781 42781 NVEMFMNIEK 10 1 0 2 Oxidation (M) _NVEM(ox)FM(ox)NIEK_ NVEM(1)FM(1)NIEK NVEM(59.91)FM(59.91)NIEK 0 2 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.7992 2 643.791406 1285.56826 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.159 1 48.159 47.659 48.659 0 0 0 0 0.0065683 1 26903 59.908 46.871 1 27320 1798 10298 10584 42782 42782 1662;1663 NVESGEEELASK 12 1 0 Unmodified _NVESGEEELASK_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.3113 2 646.304246 1290.59394 75368.13 0.64831 0.00041901 0.19499 0.00012602 0.8433 0.00054503 646.304807134296 650.311199226241 28.995 0.23948 28.995 28.866 29.106 0 43 11 5 0 0 0 4.5357E-08 1 13899 115.18 110.88 1 1.9893 2.2091 0 59728000 18683000 41045000 27321 1972 10299 10585 42783 42783 NVESGEEELASK 12 1 0 Unmodified _NVESGEEELASK_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.312 2 646.304246 1290.59394 75430.09 0.75305 0.0004867 0.29195 0.00018869 1.045 0.00067539 646.304497310063 650.311341589651 28.201 0.17464 28.201 28.111 28.286 0 19 6 4 0 0 0 1.8396E-06 2 13426 111.86 107.56 1 1.9034 2.0428 0 37323000 13273000 24050000 27322 1972 10299 10585 42784;42785 42784 NVESTNSNAYTQR 13 0 1 Unmodified _NVESTNSNAYTQR_ 0 0 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.3472 2 742.342226 1482.6699 NaN NaN NaN 0.061798 4.5876E-05 NaN NaN NaN NaN 20.393 0.17602 20.393 20.295 20.471 0 0 0 0 1.4924E-05 1 6845 94.767 79.795 1 NaN NaN 0 3492400 0 3492400 27323 300 10300 10586 42786 42786 NVFIIGATNRPDIIDPAILRPGR 23 0 3 Unmodified _NVFIIGATNRPDIIDPAILRPGR_ 0 0 2 V9HW80;P55072;Q96IF9;Q0IIN5;Q9NTC4;Q9HAP0 V9HW80 V9HW80 HEL-S-70;VCP;DKFZp434K0126 Transitional endoplasmic reticulum ATPase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.8245 3 840.146602 2517.41798 NaN NaN NaN -0.032528 -2.7328E-05 NaN NaN NaN NaN 113.27 0.84051 113.27 112.75 113.59 0 0 0 0 0.012675 1 73532 29.058 26.335 1 NaN NaN 0 5671900 0 5671900 27324 1613 10301 10587 42787 42787 NVFIIGATNRPDIIDPAILRPGR 23 0 3 Unmodified _NVFIIGATNRPDIIDPAILRPGR_ 0 0 2 V9HW80;P55072;Q96IF9;Q0IIN5;Q9NTC4;Q9HAP0 V9HW80 V9HW80 HEL-S-70;VCP;DKFZp434K0126 Transitional endoplasmic reticulum ATPase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 850.4891 3 840.146602 2517.41798 66483.99 0.86405 0.00072593 -0.097956 -8.2298E-05 0.76609 0.00064363 840.481060746152 850.155327358041 123.3 0.37694 123.3 123.11 123.48 0 83 15 8 0 0 0 0.0039704 1 73656 25.987 25.987 1 0.78325 0.90004 0 7420200 4216100 3204100 27325 1613 10301 10587 42788 42788 NVFIIGATNRPDIIDPAILRPGR 23 0 3 Unmodified _NVFIIGATNRPDIIDPAILRPGR_ 0 0 2 V9HW80;P55072;Q96IF9;Q0IIN5;Q9NTC4;Q9HAP0 V9HW80 V9HW80 HEL-S-70;VCP;DKFZp434K0126 Transitional endoplasmic reticulum ATPase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 850.4901 3 840.146602 2517.41798 67337.53 0.89631 0.00075303 -0.6016 -0.00050543 0.29471 0.0002476 840.145951294636 850.155029884191 123.09 0.37386 123.09 122.9 123.28 7.6294E-06 77 17 8 0 0 0 1.6269E-05 1 72622 45.047 45.047 1 0.83018 0.99762 0 6710500 3331600 3378900 27326 1613 10301 10587 42789 42789 NVFLLGFIPAK 11 1 0 Unmodified _NVFLLGFIPAK_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.8734 2 609.865892 1217.71723 79036.55 0.77764 0.00047425 0.34976 0.0002133 1.1274 0.00068756 609.86601993315 613.873109562591 126.25 0.61458 126.25 126 126.62 7.6294E-06 205 47 7 0 0 0 0.00031926 3 82018 87.639 83.005 1 2.1361 2.2146 0 12603000 4466500 8136600 27327 231 10302 10588 42790;42791;42792 42790 NVFLLGFIPAK 11 1 0 Unmodified _NVFLLGFIPAK_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.8738 2 609.865892 1217.71723 78528.09 0.73792 0.00045003 0.27665 0.00016872 1.0146 0.00061875 609.865998132237 613.87303607097 125.78 0.58339 125.78 125.48 126.06 -7.6294E-06 172 37 6 0 0 0 0.00018274 2 83693 93.551 93.551 1 2.3319 2.3276 0 14981000 5050600 9930300 27328 231 10302 10588 42793;42794 42793 NVFNPEAFK 9 1 0 Unmodified _NVFNPEAFK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.2794 2 533.271824 1064.5291 82580.05 0.55883 0.00029801 0.04247 2.2648E-05 0.6013 0.00032065 533.271870780866 537.278812873108 75.548 0.58525 75.548 75.255 75.841 0 164 49 5 0 0 0 0.011085 2 44389 66.692 66.692 1 1.0751 1.067 0 19157000 9417900 9738700 27329 1741 10303 10589 42795;42796 42795 NVFNPEAFK 9 1 0 Unmodified _NVFNPEAFK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.2794 2 533.271824 1064.5291 82587.52 0.6283 0.00033506 0.46612 0.00024857 1.0944 0.00058362 533.272532199954 537.278749152324 74.26 0.53052 74.26 73.992 74.523 0 159 45 5 0 0 0 0.019322 1 44628 57.96 57.96 1 1.2008 1.2457 0 24735000 10392000 14343000 27330 1741 10303 10589 42797 42797 NVFNPEAFKPGNTHK 15 2 0 Unmodified _NVFNPEAFKPGNTHK_ 0 0 1 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.9675 3 567.289878 1698.8478 81534.77 0.52485 0.00029774 0.15224 8.6366E-05 0.67709 0.00038411 567.290378351942 572.632650818701 52.41 0.34806 52.41 52.232 52.58 0 104 24 7 0 0 0 0.0040103 2 29143 29.491 29.491 1 0.89778 1.0632 0 29214000 14410000 14803000 27331 1741 10304 10590 42798;42799 42798 NVGQFSGFPFEK 12 1 0 Unmodified _NVGQFSGFPFEK_ 0 0 0 P35659;B4DFG0;D6RDA2;D6R9L5 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.8401 2 678.832777 1355.651 73407.98 0.63112 0.00042843 -0.05041 -3.422E-05 0.58071 0.00039421 678.832817178876 682.839825363964 99.026 1.6083 99.026 98.46 100.07 -7.6294E-06 951 133 13 0 0 0 2.6587E-18 6 60830 147.74 143.74 1 0.64339 0.76432 0 549150000 331810000 217340000 27332 1546 10305 10591 42800;42801;42802;42803;42804;42805 42805 NVGQFSGFPFEK 12 1 0 Unmodified _NVGQFSGFPFEK_ 0 0 0 P35659;B4DFG0;D6RDA2;D6R9L5 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3341 2 678.832777 1355.651 79016.11 0.748 0.00050777 -0.4609 -0.00031287 0.2871 0.00019489 678.832483854277 683.341525321094 101.1 0.16183 101.1 101.01 101.17 0 26 14 4 0 0 0 0.032489 1 62040 35.511 35.511 1 0.96532 1.057 0 3233000 1548300 1684700 27333 1546 10305 10591 42806 42806 NVGQFSGFPFEK 12 1 0 Unmodified _NVGQFSGFPFEK_ 0 0 0 P35659;B4DFG0;D6RDA2;D6R9L5 P35659 P35659 DEK Protein DEK ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.8336 2 678.832777 1355.651 NaN NaN NaN -0.58563 -0.00039755 NaN NaN NaN NaN 99.982 0.49659 99.982 99.91 100.41 0 0 0 0 0.0052666 2 61375 62.466 48.259 1 NaN NaN 0 8843400 8843400 0 27334 1546 10305 10591 42807;42808 42807 NVGQFSGFPFEK 12 1 0 Unmodified _NVGQFSGFPFEK_ 0 0 0 P35659;B4DFG0;D6RDA2;D6R9L5 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.8327 2 678.832777 1355.651 72555.79 0.70932 0.00048151 -0.010336 -7.0165E-06 0.69899 0.0004745 678.832877437955 682.839779266497 98.197 1.677 98.197 97.711 99.388 0 979 143 11 0 0 0 3.9237E-23 5 61763 160.53 160.53 1 0.62781 0.74123 0 1047800000 625580000 422230000 27335 1546 10305 10591 42809;42810;42811;42812;42813 42812 NVGQFSGFPFEK 12 1 0 Unmodified _NVGQFSGFPFEK_ 0 0 0 P35659;B4DFG0;D6RDA2;D6R9L5 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.8402 2 678.832777 1355.651 73765.21 0.69735 0.00047338 -0.78733 -0.00053446 -0.089978 -6.108E-05 678.83228284275 682.839032732313 99.591 0.95055 99.591 99.337 100.29 0 220 76 4 0 0 0 0.018707 2 62367 40.589 40.589 1 1.4171 1.4281 0 16182000 7130300 9051400 27336 1546 10305 10591 42814;42815 42815 NVGQFSGFPFEK 12 1 0 Unmodified _NVGQFSGFPFEK_ 0 0 0 P35659;B4DFG0;D6RDA2;D6R9L5 P35659 P35659 DEK Protein DEK MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.8328 2 678.832777 1355.651 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.22 1 100.22 99.72 100.72 0 0 0 0 0.043542 1 62936 43.308 23.521 1 27337 1546 10305 10591 42816 42816 NVGQFSGFPFEK 12 1 0 Unmodified _NVGQFSGFPFEK_ 0 0 0 P35659;B4DFG0;D6RDA2;D6R9L5 P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.8333 2 678.832777 1355.651 73101.21 0.86993 0.00059053 -0.13909 -9.442E-05 0.73084 0.00049611 678.832837870113 682.83966962545 111.67 2.4781 111.67 111.16 113.64 7.6294E-06 714 130 12 0 0 0 3.1305E-13 5 64572 135.87 128.04 1 0.85186 0.747 0 207360000 111500000 95860000 27338 1546 10305 10591 42817;42818;42819;42820;42821 42818 NVGQFSGFPFEK 12 1 0 Unmodified _NVGQFSGFPFEK_ 0 0 0 P35659;B4DFG0;D6RDA2;D6R9L5 P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.8334 2 678.832777 1355.651 73247.82 0.65723 0.00044615 -0.046244 -3.1392E-05 0.61099 0.00041476 678.832848998348 682.839767895208 111.47 2.2915 111.47 111.11 113.4 0 634 120 10 0 0 0 0.00020732 6 64099 89.317 89.317 1 0.8443 0.72963 0 220580000 117770000 102810000 27339 1546 10305 10591 42822;42823;42824;42825;42826;42827 42825 NVHSEDFENR 10 0 1 Unmodified _NVHSEDFENR_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.7803 2 623.77599 1245.53743 NaN NaN NaN -0.044651 -2.7852E-05 NaN NaN NaN NaN 18.412 0.18335 18.412 18.346 18.53 0 0 0 0 0.048381 1 5180 47.198 34.972 1 NaN NaN 0 2550600 0 2550600 27340 878 10306 10592 42828 42828 NVHSEDFENR 10 0 1 Unmodified _NVHSEDFENR_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.7799 2 623.77599 1245.53743 76360.8 0.044692 2.7878E-05 -0.21918 -0.00013672 -0.17449 -0.00010884 623.775972464083 628.779980092653 19.942 0.24781 19.942 19.798 20.046 0 49 13 5 0 0 0 0.024915 2 5509 53.751 50.18 1 1.4905 1.2939 0 2378500 960670 1417800 27341 878 10306 10592 42829;42830 42829 NVIFEISPTEEVGDFEVK 18 1 0 Unmodified _NVIFEISPTEEVGDFEVK_ 0 0 0 A4QPB0;A0A024RC65;P46940;H0YLE8;B4E2M0;B4DNP4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1030.5205 2 1026.51223 2051.0099 61764.74 0.76716 0.0007875 -0.30341 -0.00031145 0.46375 0.00047605 1026.51130731991 1030.51925239091 120.7 0.36411 120.7 120.5 120.86 0 108 26 6 0 0 0 5.0816E-05 1 77905 57.802 57.802 1 1.5864 1.6522 0 11626000 4435200 7190900 27342 352 10307 10593 42831 42831 NVIFEISPTEEVGDFEVK 18 1 0 Unmodified _NVIFEISPTEEVGDFEVK_ 0 0 0 A4QPB0;A0A024RC65;P46940;H0YLE8;B4E2M0;B4DNP4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1030.5214 2 1026.51223 2051.0099 61897.6 0.67031 0.00068809 -0.12126 -0.00012447 0.54906 0.00056361 1026.51174798613 1031.02028301964 120.26 0.343 120.26 120.08 120.42 7.6294E-06 115 24 7 0 0 0 5.9329E-12 1 79429 108.17 108.17 1 1.6594 1.693 0 12061000 4683900 7376800 27343 352 10307 10593 42832 42832 NVIFEISPTEEVGDFEVK 18 1 0 Unmodified _NVIFEISPTEEVGDFEVK_ 0 0 0 A4QPB0;A0A024RC65;P46940;H0YLE8;B4E2M0;B4DNP4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1030.5155 2 1026.51223 2051.0099 59787.45 0.78867 0.00080957 -0.7762 -0.00079678 0.012464 1.2795E-05 1026.51110963659 1030.51756411042 133.08 0.30553 133.08 133.01 133.32 0 48 14 5 0 0 0 0.056333 1 81022 21.251 21.251 1 1.1022 0.87196 0 4162400 1757300 2405100 27344 352 10307 10593 42833 42833 NVIFEISPTEEVGDFEVK 18 1 0 Unmodified _NVIFEISPTEEVGDFEVK_ 0 0 0 A4QPB0;A0A024RC65;P46940;H0YLE8;B4E2M0;B4DNP4 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1030.5177 2 1026.51223 2051.0099 60132.59 0.88578 0.00090927 -0.63986 -0.00065683 0.24592 0.00025244 1027.01207627233 1031.02073212201 132.88 0.25529 132.88 132.77 133.02 0 29 12 4 0 0 0 0.013761 1 79963 26.13 20.851 1 0.66513 0.54728 0 1847500 786480 1061000 27345 352 10307 10593 42834 42834 NVIFQPVAELK 11 1 0 Unmodified _NVIFQPVAELK_ 0 0 0 Q01813;Q8WTZ9;O14943;B1APP8;H0Y757;Q49A78 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.3717 2 629.363713 1256.71287 79879.14 0.81443 0.00051257 0.27478 0.00017293 1.0892 0.0006855 629.864965108902 633.370768265095 111.68 0.37334 111.68 111.47 111.84 7.6294E-06 57 20 4 0 0 0 0.0064337 1 64730 54.416 52.207 1 1.3861 1.1001 0 2997000 1561000 1436000 27346 1677 10308 10594 42835 42835 NVIHASDSVEGAQR 14 0 1 Unmodified _NVIHASDSVEGAQR_ 0 0 0 A0A087WVT9;Q4TT34;F2Z2X0;O00746 A0A087WVT9 A0A087WVT9 NME4 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8694 2 741.868411 1481.72227 NaN NaN NaN 1.0561 0.00078351 NaN NaN NaN NaN 24.423 0.20167 24.423 24.337 24.538 0 0 0 0 3.3606E-06 1 10177 98.353 60.632 1 NaN NaN 0 3612800 3612800 0 27347 420 10309 10595 42836 42836 NVIHASDSVEGAQR 14 0 1 Unmodified _NVIHASDSVEGAQR_ 0 0 0 A0A087WVT9;Q4TT34;F2Z2X0;O00746 A0A087WVT9 A0A087WVT9 NME4 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.874 2 741.868411 1481.72227 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.128 1 24.128 23.628 24.628 0 0 0 0 0.00044101 1 9917 83.397 56.068 1 27348 420 10309 10595 42837 42837 NVIHASDSVEGAQR 14 0 1 Unmodified _NVIHASDSVEGAQR_ 0 0 0 A0A087WVT9;Q4TT34;F2Z2X0;O00746 A0A087WVT9 A0A087WVT9 NME4 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.2508 3 494.914699 1481.72227 86271.63 0.22232 0.00011003 -0.61243 -0.0003031 -0.39011 -0.00019307 494.914632759403 498.250388067745 27.355 0.71426 27.355 27.142 27.856 0 94 30 7 0 0 0 0.054305 1 10597 16.666 16.666 1 0.63294 0.5482 0 2560700 1449500 1111200 27349 420 10309 10595 42838 42838 NVIHASDSVEGAQR 14 0 1 Unmodified _NVIHASDSVEGAQR_ 0 0 0 A0A087WVT9;Q4TT34;F2Z2X0;O00746 A0A087WVT9 A0A087WVT9 NME4 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.87 2 741.868411 1481.72227 68840.82 0.68903 0.00051117 0.052592 3.9016E-05 0.74162 0.00055018 741.868955144699 746.873402350591 27.347 0.50026 27.347 27.256 27.756 -1.9073E-06 68 20 7 0 0 0 0.0085091 1 10644 38.58 37.383 1 0.53754 0.46599 0 2054400 1399700 654710 27350 420 10309 10595 42839 42839 NVIHASDSVEGAQR 14 0 1 Unmodified _NVIHASDSVEGAQR_ 0 0 0 A0A087WVT9;Q4TT34;F2Z2X0;O00746 A0A087WVT9 A0A087WVT9 NME4 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.9146 3 494.914699 1481.72227 87929.7 -0.13518 -6.6904E-05 0.12901 6.3847E-05 -0.0061768 -3.057E-06 494.914748171565 498.25130916366 27.365 0.5268 27.365 27.168 27.695 0 70 20 6 0 0 0 0.00032755 1 10117 43.813 42.174 1 0.52217 0.45509 0 1808000 1093200 714900 27351 420 10309 10595 42840 42840 NVIHPFLSR 9 0 1 Unmodified _NVIHPFLSR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 361.5422 3 361.541697 1081.60326 NaN NaN NaN -0.13565 -4.9042E-05 NaN NaN NaN NaN 52.098 0.42402 52.098 51.951 52.375 0 0 0 0 0.035205 1 29594 35.826 12.784 1 NaN NaN 0 3841500 3841500 0 27352 363 10310 10596 42841 42841 NVIVNGLVLASDGQK 15 1 0 Unmodified _NVIVNGLVLASDGQK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.938 2 763.93048 1525.84641 69846.48 1.0587 0.0008088 0.038877 2.9699E-05 1.0976 0.0008385 763.930775514472 767.93745480568 95.888 0.5576 95.888 95.697 96.254 0 105 49 4 0 0 0 0.0006361 2 58296 53.252 53.252 1 1.4654 1.4913 0 14063000 4180000 9882700 27353 1561 10311 10597 42842;42843 42843 NVIVNGLVLASDGQK 15 1 0 Unmodified _NVIVNGLVLASDGQK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.4317 2 763.93048 1525.84641 NaN NaN NaN 0.34562 0.00026403 NaN NaN NaN NaN 95.835 0.19665 95.835 95.741 95.938 0 0 0 0 0.0097533 1 58346 51.286 40.122 1 NaN NaN 0 4703100 4703100 0 27354 1561 10311 10597 42844 42844 NVLAASSEYFQSLFTNK 17 1 0 Unmodified _NVLAASSEYFQSLFTNK_ 0 0 0 Q9ULJ3;Q5H9S0;B4DTN6;E7EVF9 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 959.9833 2 959.980898 1917.94724 64392.97 0.74268 0.00071296 0.12861 0.00012346 0.87129 0.00083643 959.981028758433 964.489991729933 125.94 0.34364 125.94 125.74 126.08 0 78 24 5 0 0 0 7.7481E-05 1 81903 63.76 63.76 1 0.60911 0.61591 0 5646600 3258200 2388400 27355 2109 10312 10598 42845 42845 NVLASASADNTVILWDMSLGK 21 1 0 Oxidation (M) _NVLASASADNTVILWDM(ox)SLGK_ NVLASASADNTVILWDM(1)SLGK NVLASASADNTVILWDM(42.57)SLGK 0 1 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1115.0709 2 1111.06209 2220.10963 60741.95 0.18411 0.00020456 -0.026491 -2.9433E-05 0.15762 0.00017512 1111.56432530692 1115.57048750346 117.91 0.40617 117.91 117.74 118.15 0 76 23 6 0 0 0 2.9589E-05 1 75647 42.568 42.568 1 1.2838 1.2897 0 7424200 2912500 4511700 27356 339 10313 10599 42846 42846 255 NVLCSACSGQGGK 13 1 0 Unmodified _NVLCSACSGQGGK_ 0 0 0 A0A024R6S1;O60884;A0A087WT48 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.3077 2 669.300461 1336.58637 73731.5 0.74873 0.00050113 -0.34021 -0.00022771 0.40852 0.00027342 669.299899173359 673.307584079389 23.865 0.39717 23.865 23.707 24.104 -1.9073E-06 95 19 8 0 0 0 7.8532E-05 3 9668 94.363 92.305 1 1.2841 1.3101 0 14256000 6075700 8180100 27357 208 10314 10600 42847;42848;42849 42848 NVLCSACSGQGGK 13 1 0 Unmodified _NVLCSACSGQGGK_ 0 0 0 A0A024R6S1;O60884;A0A087WT48 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3073 2 669.300461 1336.58637 74583.25 0.50271 0.00033646 -0.70805 -0.0004739 -0.20535 -0.00013744 669.300250507902 673.307174776065 23.659 0.372 23.659 23.42 23.792 0 60 15 7 0 0 0 1.435E-18 1 9465 138.22 137.22 1 1.2024 1.292 0 21492000 10401000 11090000 27358 208 10314 10600 42850 42850 NVLCSACSGQGGK 13 1 0 Unmodified _NVLCSACSGQGGK_ 0 0 0 A0A024R6S1;O60884;A0A087WT48 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.3003 2 669.300461 1336.58637 72766.38 0.39137 0.00026195 -0.050552 -3.3834E-05 0.34082 0.00022811 669.300755423955 673.307553506332 26.204 0.40141 26.204 26.02 26.421 1.9073E-06 95 16 8 0 0 0 0.0044503 2 9760 48.44 48.44 1 0.88698 0.69707 0 3136700 1746900 1389700 27359 208 10314 10600 42851;42852 42851 NVLCSACSGQGGK 13 1 0 Unmodified _NVLCSACSGQGGK_ 0 0 0 A0A024R6S1;O60884;A0A087WT48 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.3074 2 669.300461 1336.58637 73756.82 0.41874 0.00028026 -0.19205 -0.00012854 0.22669 0.00015173 669.300618004902 673.307620723452 26.26 0.37461 26.26 26.08 26.455 -1.9073E-06 97 16 9 0 0 0 0.0012299 2 9330 58.676 58.676 1 0.87061 0.67743 0 3540300 1898800 1641500 27360 208 10314 10600 42853;42854 42854 NVLDTSWPTPPPALR 15 0 1 Unmodified _NVLDTSWPTPPPALR_ 0 0 0 D3DTH7 D3DTH7 D3DTH7 MYO1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.9495 2 832.443754 1662.87296 67880.05 1.1552 0.00096167 0.23893 0.0001989 1.3942 0.0011606 832.443777460245 837.447511596737 110.45 0.53282 110.45 110.1 110.64 -7.6294E-06 180 38 7 0 0 0 0.0002224 1 69364 67.456 57.769 1 0.84751 0.85994 0 28870000 14778000 14092000 27361 1189 10315 10601 42855 42855 NVLDTSWPTPPPALR 15 0 1 Unmodified _NVLDTSWPTPPPALR_ 0 0 0 D3DTH7 D3DTH7 D3DTH7 MYO1C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.4463 2 832.443754 1662.87296 NaN NaN NaN -3.5013 -0.0029146 NaN NaN NaN NaN 110.63 0.1226 110.63 110.53 110.65 0 0 0 0 0.024227 1 69488 41.684 24.742 1 NaN NaN 0 3832400 0 3832400 27362 1189 10315 10601 42856 42856 NVLDTSWPTPPPALR 15 0 1 Unmodified _NVLDTSWPTPPPALR_ 0 0 0 D3DTH7 D3DTH7 D3DTH7 MYO1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.4487 2 832.443754 1662.87296 67254.5 0.91818 0.00076434 0.74227 0.0006179 1.6605 0.0013822 832.443216311878 837.447644799495 109.81 0.56549 109.81 109.52 110.09 0 176 36 8 0 0 0 2.8101E-06 3 70524 98.407 94.191 1 0.81955 0.82094 0 18851000 11243000 7608400 27363 1189 10315 10601 42857;42858;42859 42857 NVLDTSWPTPPPALR 15 0 1 Unmodified _NVLDTSWPTPPPALR_ 0 0 0 D3DTH7 D3DTH7 D3DTH7 MYO1C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 832.9468 2 832.443754 1662.87296 66605.13 0.77021 0.00064115 -0.08731 -7.268E-05 0.6829 0.00056847 832.44352786792 837.447781615184 121.47 0.46615 121.47 121.19 121.66 0 94 21 6 0 0 0 0.0159 2 72256 43.544 43.544 1 1.5704 1.3498 0 6569100 2158700 4410400 27364 1189 10315 10601 42860;42861 42861 NVLDTSWPTPPPALR 15 0 1 Unmodified _NVLDTSWPTPPPALR_ 0 0 0 D3DTH7 D3DTH7 D3DTH7 MYO1C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 837.4492 2 832.443754 1662.87296 66539.26 0.84069 0.00069982 -0.30932 -0.00025749 0.53137 0.00044233 832.945347044179 837.447387397864 121.27 0.52272 121.27 121.01 121.53 7.6294E-06 96 26 5 0 0 0 0.0018483 1 71200 46.592 40.352 1 1.3892 1.1581 0 6416400 2588500 3827900 27365 1189 10315 10601 42862 42862 NVLGHMQQGGAPSPFDR 17 0 1 Oxidation (M) _NVLGHM(ox)QQGGAPSPFDR_ NVLGHM(1)QQGGAPSPFDR NVLGHM(75.24)QQGGAPSPFDR 0 1 0 Q01813;Q8WTZ9;O14943;B1APP8;H0Y757;Q49A78 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.2958 3 609.624932 1825.85297 77130.24 0.62028 0.00037814 -0.32454 -0.00019785 0.29574 0.00018029 609.624707491683 612.960693783773 49.295 0.62217 49.295 48.913 49.535 0 230 44 7 0 0 0 1.5804E-05 2 26951 75.239 75.239 1 2.4968 2.6283 0 39914000 12658000 27256000 27366 1677 10316 10602 42863;42864 42864 1477 NVLGLVPQALPK 12 1 0 Unmodified _NVLGLVPQALPK_ 0 0 0 Q8N1G0;H0Y5I5;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.8878 2 624.887355 1247.76016 77611.22 0.74344 0.00046456 -0.11114 -6.945E-05 0.6323 0.00039511 624.887242095295 628.894302375003 107.64 0.54491 107.64 107.34 107.89 0 175 39 6 0 0 0 0.00022689 2 67014 84.213 84.213 1 0.76938 0.80635 0 16606000 10199000 6407000 27367 1905 10317 10603 42865;42866 42866 NVLGLVPQALPK 12 1 0 Unmodified _NVLGLVPQALPK_ 0 0 0 Q8N1G0;H0Y5I5;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.8876 2 624.887355 1247.76016 79050.65 0.62607 0.00039122 -0.046032 -2.8765E-05 0.58004 0.00036246 624.887270481218 628.894416486107 106.96 0.54944 106.96 106.73 107.27 0 157 38 6 0 0 0 0.00013824 2 68155 93.551 93.551 1 0.71237 0.73872 0 18784000 10860000 7924100 27368 1905 10317 10603 42867;42868 42868 NVLGLVPQALPK 12 1 0 Unmodified _NVLGLVPQALPK_ 0 0 0 Q8N1G0;H0Y5I5;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.8943 2 624.887355 1247.76016 NaN NaN NaN -0.30555 -0.00019093 NaN NaN NaN NaN 119.19 0.40781 119.19 119 119.41 0 0 0 0 0.036588 1 70447 45.137 38.832 1 NaN NaN 0 4111600 0 4111600 27369 1905 10317 10603 42869 42869 NVLGLVPQALPK 12 1 0 Unmodified _NVLGLVPQALPK_ 0 0 0 Q8N1G0;H0Y5I5;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.8942 2 624.887355 1247.76016 78072.98 0.79902 0.0004993 0.11083 6.9259E-05 0.90985 0.00056856 624.887436356591 628.894426788653 118.95 0.41255 118.95 118.75 119.17 0 66 16 6 0 0 0 0.0036249 2 69390 55.567 55.567 1 1.6575 1.3592 0 5322400 1978300 3344100 27370 1905 10317 10603 42870;42871 42870 NVLIEVNPQTR 11 0 1 Unmodified _NVLIEVNPQTR_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65;A0A087WVM7;A0A0U3B3H7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.8639 2 641.859326 1281.7041 74855.27 0.83658 0.00053696 -0.27022 -0.00017345 0.56635 0.00036352 641.859238604869 646.863344160955 70.566 0.93548 70.566 70.317 71.252 0 453 74 11 0 0 0 0.00045221 2 40987 77.379 75.294 1 1.1136 1.2971 0 188600000 82431000 106170000 27371 759 10318 10604 42872;42873 42872 NVLIEVNPQTR 11 0 1 Unmodified _NVLIEVNPQTR_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65;A0A087WVM7;A0A0U3B3H7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.8643 2 641.859326 1281.7041 74791.27 0.624 0.00040052 -0.19178 -0.0001231 0.43222 0.00027742 641.859243631147 646.86331932745 69.33 0.79785 69.33 69.101 69.899 -7.6294E-06 397 66 8 0 0 0 0.00019413 1 41167 93.058 76.34 1 1.1032 1.2692 0 208480000 99970000 108510000 27372 759 10318 10604 42874 42874 NVLIEVNPQTR 11 0 1 Unmodified _NVLIEVNPQTR_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65;A0A087WVM7;A0A0U3B3H7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.8591 2 641.859326 1281.7041 74754.17 0.48758 0.00031295 -0.10966 -7.0386E-05 0.37792 0.00024257 641.859316099646 646.863361682767 80.642 1.2614 80.642 80.393 81.655 0 376 83 10 0 0 0 0.00038057 2 43602 83 83 1 1.3716 1.1799 0 49346000 21254000 28092000 27373 759 10318 10604 42875;42876 42876 NVLLNNSEK 9 1 0 Unmodified _NVLLNNSEK_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.7866 2 515.780013 1029.54547 NaN NaN NaN -0.25893 -0.00013355 NaN NaN NaN NaN 30.549 0.41051 30.549 30.401 30.812 0 0 0 0 0.0014274 1 14977 86.205 49.046 1 NaN NaN 0 27349000 0 27349000 27374 1694 10319 10605 42877 42877 NVLLNNSEK 9 1 0 Unmodified _NVLLNNSEK_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7872 2 515.780013 1029.54547 84526.91 0.50415 0.00026003 0.028264 1.4578E-05 0.53241 0.00027461 515.780042753918 519.787048716238 30.008 0.48063 30.008 29.819 30.3 -1.9073E-06 127 38 5 0 0 0 0.0019814 1 14608 78.334 50.5 1 1.6685 1.865 0 99921000 41602000 58320000 27375 1694 10319 10605 42878 42878 NVLTNTQSENER 12 0 1 Unmodified _NVLTNTQSENER_ 0 0 0 Q8TD16 Q8TD16 Q8TD16 BICD2 Protein bicaudal D homolog 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.844 2 702.839319 1403.66409 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.907 1 24.907 24.407 25.407 0 0 0 0 0.0010671 1 10587 72.434 38.473 1 27376 1932 10320 10606 42879 42879 NVLVPLSR 8 0 1 Unmodified _NVLVPLSR_ 0 0 0 Q2TB10;B7Z4V7;A0A087WXB4 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.2838 2 449.279452 896.544351 NaN NaN NaN 0.6067 0.00027258 NaN NaN NaN NaN 68.577 0.71649 68.577 68.303 69.02 0 0 0 0 0.039261 1 40789 54.157 16.599 1 NaN NaN 0 6524800 0 6524800 27377 1777 10321 10607 42880 42880 NVLVSEDNVAK 11 1 0 Unmodified _NVLVSEDNVAK_ 0 0 0 B4DMZ0;Q53EL3;B5BU52;B2R6Q4;A8K3B6;P41240;B4DP99 B4DMZ0 B4DMZ0 CSK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase CSK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.3168 2 594.31696 1186.61937 80400.93 1.6902 0.0010045 -1.2059 -0.00071666 0.48439 0.00028788 594.817613331128 598.322698008041 43.731 0.53483 43.731 43.494 44.029 0 105 42 5 0 0 0 0.0076189 1 23819 52.278 39.241 1 0.62111 0.63739 0 25413000 12209000 13204000 27378 720 10322 10608 42881 42881 NVMVEPHR 8 0 1 Oxidation (M) _NVM(ox)VEPHR_ NVM(1)VEPHR NVM(122.18)VEPHR 0 1 0 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A0A0D9SFM2;M0QXC9 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.2479 2 499.247826 996.481099 79846.9 0.011749 5.8654E-06 -0.0005903 -2.9471E-07 0.011158 5.5707E-06 499.247861705556 504.251948452566 17.382 0.66533 17.382 17.143 17.808 0 87 22 8 0 0 0 0.00046967 2 4499 122.18 112.27 1 0.89832 1.0071 0 91120000 49277000 41844000 27379 1506 10323 10609 42882;42883 42882 1275 NVMVEPHR 8 0 1 Oxidation (M) _NVM(ox)VEPHR_ NVM(1)VEPHR NVM(54.16)VEPHR 0 1 0 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A0A0D9SFM2;M0QXC9 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 333.1679 3 333.167643 996.481099 103176.8 -0.28284 -9.4233E-05 0.33715 0.00011233 0.054311 1.8095E-05 333.167692462539 336.503774628531 17.373 0.41571 17.373 17.143 17.558 1.9073E-06 52 13 6 0 0 0 0.006852 1 4557 54.157 44.569 1 0.76944 0.77857 0 17925000 10382000 7543100 27380 1506 10323 10609 42884 42884 1275 NVMVEPHR 8 0 1 Oxidation (M) _NVM(ox)VEPHR_ NVM(1)VEPHR NVM(45.08)VEPHR 0 1 0 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A0A0D9SFM2;M0QXC9 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.2477 2 499.247826 996.481099 87922.27 0.1487 7.4239E-05 0.046217 2.3074E-05 0.19492 9.7313E-05 499.24782905673 504.251997821134 23.451 0.42134 23.451 23.296 23.717 0 72 21 5 0 0 0 0.022451 1 7956 45.081 45.081 1 1.0314 0.88596 0 2701500 1209000 1492400 27381 1506 10323 10609 42885 42885 1275 NVMVEPHR 8 0 1 Unmodified _NVMVEPHR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A0A0D9SFM2;M0QXC9 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.2546 2 491.250369 980.486184 86653.3 0.095477 4.6903E-05 0.94258 0.00046304 1.0381 0.00050995 491.250252112782 496.254366042981 23.481 0.50932 23.481 23.274 23.784 0 115 25 8 0 0 0 0.056359 2 7920 41.429 33.799 1 0.95008 0.79437 0 3644900 1954200 1690700 27382 1506 10323 10610 42886;42887 42886 NVNSNLITWNR 11 0 1 Unmodified _NVNSNLITWNR_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.8469 2 665.84675 1329.67895 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.618 1 76.618 76.118 77.118 0 0 0 0 3.1676E-06 1 45185 98.249 59.956 1 27383 1763 10324 10611 42888 42888 NVNSNLITWNR 11 0 1 Unmodified _NVNSNLITWNR_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.8511 2 665.84675 1329.67895 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.666 1 76.666 76.166 77.166 -7.6294E-06 0 0 0 0.00084637 1 45218 70.056 38.684 1 27384 1763 10324 10611 42889 42889 NVPNLHVMK 9 1 0 Oxidation (M) _NVPNLHVM(ox)K_ NVPNLHVM(1)K NVPNLHVM(69.1)K 0 1 0 P46783;Q59GE4;F6U211;S4R435;Q9NQ39 P46783 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.2871 2 534.286951 1066.55935 80792.09 0.41904 0.00022389 0.022171 1.1846E-05 0.44121 0.00023573 534.286978481774 538.293838038961 28.996 0.38868 28.996 28.829 29.218 0 99 20 9 0 0 0 0.0021799 2 13900 69.105 57.15 1 1.6947 2.0014 0 375010000 142550000 232460000 27385 1573 10325 10612 42890;42891 42891 1354 NVPNLHVMK 9 1 0 Oxidation (M) _NVPNLHVM(ox)K_ NVPNLHVM(1)K NVPNLHVM(62.58)K 0 1 0 P46783;Q59GE4;F6U211;S4R435;Q9NQ39 P46783 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 359.1986 3 356.52706 1066.55935 96812.01 0.040659 1.4496E-05 -0.24921 -8.8851E-05 -0.20856 -7.4356E-05 356.526866053122 359.198350548772 29.004 0.30893 29.004 28.85 29.159 0 52 15 6 0 0 0 0.0017916 2 13911 62.582 51.83 1 1.4898 1.6772 0 121530000 40514000 81012000 27386 1573 10325 10612 42892;42893 42892 1354 NVPNLHVMK 9 1 0 Oxidation (M) _NVPNLHVM(ox)K_ NVPNLHVM(1)K NVPNLHVM(77.67)K 0 1 0 P46783;Q59GE4;F6U211;S4R435;Q9NQ39 P46783 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.287 2 534.286951 1066.55935 81535.88 0.65028 0.00034743 -0.073577 -3.9311E-05 0.5767 0.00030812 534.286913918124 538.293742232303 28.157 0.27109 28.157 28.056 28.328 0 53 11 9 0 0 0 0.00098452 1 13344 77.674 77.674 1 1.5815 1.8627 0 510970000 194840000 316130000 27387 1573 10325 10612 42894 42894 1354 NVPVITGSK 9 1 0 Unmodified _NVPVITGSK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.7699 2 457.768917 913.523281 89340.53 0.47839 0.00021899 -0.072784 -3.3318E-05 0.40561 0.00018567 457.768839363076 461.775872095497 38.628 1.2725 38.628 38.199 39.472 0 523 103 8 0 0 0 0.024698 2 19719 48.157 31.215 1 1.6398 1.8806 0 194740000 76982000 117760000 27388 730 10326 10613 42895;42896 42896 NVPVITGSK 9 1 0 Unmodified _NVPVITGSK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.7763 2 457.768917 913.523281 89110.63 0.039343 1.801E-05 0.12945 5.9258E-05 0.16879 7.7268E-05 457.768901256961 461.775926556776 37.842 1.0337 37.842 37.341 38.374 0 411 82 10 0 0 0 0.014627 2 19948 55.503 25.696 1 1.4641 1.7171 0 329200000 136290000 192910000 27389 730 10326 10613 42897;42898 42898 NVPVITGSK 9 1 0 Unmodified _NVPVITGSK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 461.7761 2 457.768917 913.523281 88366.75 -0.11547 -5.286E-05 0.17809 8.1522E-05 0.062612 2.8662E-05 457.768981126132 461.776002610327 43.361 1.4795 43.361 42.984 44.463 0 272 93 6 0 0 0 0.063863 1 19750 35.445 14.89 1 2.8279 2.311 0 8192900 2184800 6008100 27390 730 10326 10613 42899 42899 NVPYVFVR 8 0 1 Unmodified _NVPYVFVR_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.2792 2 497.279452 992.544351 85371.94 0.18672 9.2851E-05 0.072675 3.614E-05 0.25939 0.00012899 497.279433531774 502.28356944673 81.615 1.5508 81.615 81.026 82.577 0 771 133 9 0 0 0 0.014564 3 48407 62.717 52.751 1 0.68463 0.81141 0 510400000 300780000 209620000 27391 812 10327 10614 42900;42901;42902 42900 NVPYVFVR 8 0 1 Unmodified _NVPYVFVR_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.2798 2 497.279452 992.544351 84820.86 0.21005 0.00010445 0.032196 1.601E-05 0.24224 0.00012046 497.279385564447 502.28354684158 80.369 1.8232 80.369 79.892 81.715 0 675 149 7 0 0 0 0.0077998 4 48722 81.381 65.749 1 0.71444 0.82465 0 242720000 138350000 104370000 27392 812 10327 10614 42903;42904;42905;42906 42903 NVPYVFVR 8 0 1 Unmodified _NVPYVFVR_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.2836 2 497.279452 992.544351 85225.91 0.30944 0.00015388 -0.24759 -0.00012312 0.061849 3.0756E-05 497.279212671195 502.283440832096 93.044 2.3059 93.044 92.527 94.833 0 724 145 8 0 0 0 0.059997 1 52286 40.103 36.711 1 0.87737 0.75454 0 47439000 25223000 22216000 27393 812 10327 10614 42907 42907 NVPYVFVR 8 0 1 Unmodified _NVPYVFVR_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.2795 2 497.279452 992.544351 85579.55 -0.03441 -1.7112E-05 0.060376 3.0024E-05 0.025966 1.2912E-05 497.279356978677 502.283591111023 92.918 1.9188 92.918 92.382 94.301 0 683 122 9 0 0 0 0.019334 3 51216 59.205 59.205 1 0.83443 0.72784 0 39857000 21886000 17971000 27394 812 10327 10614 42908;42909;42910 42909 NVQAEEMVEFSSGLK 15 1 0 Oxidation (M) _NVQAEEM(ox)VEFSSGLK_ NVQAEEM(1)VEFSSGLK NVQAEEM(46.71)VEFSSGLK 0 1 0 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.4059 2 842.398352 1682.78215 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.553 1 72.553 72.053 73.053 0 0 0 0 0.0051132 1 42488 46.706 31.734 1 27395 1518 10328 10615 42911 42911 1284 NVQALEIELQSQLALK 16 1 0 Unmodified _NVQALEIELQSQLALK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.0103 2 899.009458 1796.00436 NaN NaN NaN 0.11994 0.00010783 NaN NaN NaN NaN 120.13 1.4691 120.13 119.82 121.29 0 0 0 0 5.1028E-89 2 77249 245.69 231.72 1 NaN NaN 0 147500000 147500000 0 + 27396 1161 10329 10616 42912;42913 42912 NVQALEIELQSQLALK 16 1 0 Unmodified _NVQALEIELQSQLALK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.513 2 899.009458 1796.00436 NaN NaN NaN 0.57925 0.00052075 NaN NaN NaN NaN 122.62 0.095322 122.62 122.57 122.66 0 0 0 0 0.005856 1 79418 67.153 60.921 1 NaN NaN 0 2353800 2353800 0 + 27397 1161 10329 10616 42914 42914 NVQALEIELQSQLALK 16 1 0 Unmodified _NVQALEIELQSQLALK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.5098 2 899.009458 1796.00436 NaN NaN NaN -0.41064 -0.00036917 NaN NaN NaN NaN 143.36 0.63715 143.36 143.11 143.74 0 0 0 0 1.0393E-08 1 90789 122.42 116.45 1 NaN NaN 0 1521800 1521800 0 + 27398 1161 10329 10616 42915 42915 NVQALEIELQSQLALK 16 1 0 Unmodified _NVQALEIELQSQLALK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.0106 2 899.009458 1796.00436 NaN NaN NaN 0.0053825 4.8389E-06 NaN NaN NaN NaN 119.63 1.5766 119.63 119.32 120.89 0 0 0 0 6.9297E-106 3 79345 259.23 243.34 1 NaN NaN 0 180880000 180880000 0 + 27399 1161 10329 10616 42916;42917;42918 42917 NVQALEIELQSQLALK 16 1 0 Unmodified _NVQALEIELQSQLALK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.5145 2 899.009458 1796.00436 NaN NaN NaN 1.6231 0.0014592 NaN NaN NaN NaN 120.98 0.23357 120.98 120.89 121.13 0 0 0 0 1.8918E-12 1 80019 136.38 105.49 1 NaN NaN 0 12472000 12472000 0 + 27400 1161 10329 10616 42919 42919 NVQALEIELQSQLALK 16 1 0 Unmodified _NVQALEIELQSQLALK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.0089 2 899.009458 1796.00436 NaN NaN NaN 0.35886 0.00032262 NaN NaN NaN NaN 143.24 0.49979 143.24 143.09 143.59 0 0 0 0 0.00028196 1 92323 87.001 73.573 1 NaN NaN 0 1034600 1034600 0 + 27401 1161 10329 10616 42920 42920 NVQALEIELQSQLALK 16 1 0 Unmodified _NVQALEIELQSQLALK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 899.5118 2 899.009458 1796.00436 NaN NaN NaN -0.32818 -0.00029504 NaN NaN NaN NaN 133.07 1.432 133.07 132.79 134.23 0 0 0 0 2.6055E-35 2 80901 176.51 168.4 1 NaN NaN 0 114580000 114580000 0 + 27402 1161 10329 10616 42921;42922 42921 NVQALEIELQSQLALK 16 1 0 Unmodified _NVQALEIELQSQLALK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 899.0101 2 899.009458 1796.00436 NaN NaN NaN -0.17739 -0.00015948 NaN NaN NaN NaN 132.77 0.63232 132.77 132.52 133.15 0 0 0 0 5.3733E-05 1 79770 96.734 82.315 1 NaN NaN 0 94662000 94662000 0 + 27403 1161 10329 10616 42923 42923 NVQALEIELQSQLALK 16 1 0 Unmodified _NVQALEIELQSQLALK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 899.5119 2 899.009458 1796.00436 NaN NaN NaN 0.86619 0.00077871 NaN NaN NaN NaN 133.35 0.88681 133.35 133.11 134 0 0 0 0 0.012798 1 80395 60.157 54.054 1 NaN NaN 0 4019000 4019000 0 + 27404 1161 10329 10616 42924 42924 NVQALEIELQSQLALK 16 1 0 Unmodified _NVQALEIELQSQLALK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 899.5115 2 899.009458 1796.00436 NaN NaN NaN 0.53727 0.00048301 NaN NaN NaN NaN 134.42 0.5563 134.42 134.04 134.59 0 0 0 0 0.02954 1 81154 49.31 40.121 1 NaN NaN 0 8619800 8619800 0 + 27405 1161 10329 10616 42925 42925 NVQDAIADAEQRGEHALK 18 1 1 Unmodified _NVQDAIADAEQRGEHALK_ 0 0 1 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.9985 3 655.664332 1963.97117 NaN NaN NaN 0.03958 2.5952E-05 NaN NaN NaN NaN 74.796 0.21371 74.796 74.618 74.831 0 0 0 0 0.030175 1 44977 34.928 26.569 1 NaN NaN 0 5656700 5656700 0 + 27406 1166 10330 10617 42926 42926 NVQDAIADAEQRGEHALK 18 1 1 Unmodified _NVQDAIADAEQRGEHALK_ 0 0 1 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.6646 3 655.664332 1963.97117 NaN NaN NaN 0.19754 0.00012952 NaN NaN NaN NaN 87.698 0.75206 87.698 87.358 88.11 0 0 0 0 0.010135 1 48161 41.412 27.58 1 NaN NaN 0 12493000 12493000 0 + 27407 1166 10330 10617 42927 42927 NVQDAIADAEQRGEHALK 18 1 1 Unmodified _NVQDAIADAEQRGEHALK_ 0 0 1 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.665 3 655.664332 1963.97117 NaN NaN NaN 0.14896 9.7668E-05 NaN NaN NaN NaN 87.712 0.7394 87.712 87.398 88.137 0 0 0 0 4.6733E-06 1 47347 74.12 60.492 1 NaN NaN 0 12890000 12890000 0 + 27408 1166 10330 10617 42928 42928 NVQGIIEILK 10 1 0 Unmodified _NVQGIIEILK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.8518 2 563.845156 1125.67576 81657.35 0.7914 0.00044623 -0.28056 -0.00015819 0.51084 0.00028804 563.844824365292 567.852054121139 107.41 0.85541 107.41 107.07 107.93 -7.6294E-06 214 63 5 0 0 0 0.00041053 2 66782 87.308 77.042 1 1.5405 1.5157 0 23856000 10041000 13815000 27409 1207 10331 10618 42929;42930 42930 NVQLPEVTINEETALAEVNLK 21 1 0 Unmodified _NVQLPEVTINEETALAEVNLK_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1167.1295 2 1162.62083 2323.22711 58138.59 0.14835 0.00017248 -0.40698 -0.00047316 -0.25863 -0.00030068 1163.12128106148 1167.12929939936 122.28 0.2579 122.28 122.2 122.45 0 81 17 6 0 0 0 0.0012012 1 79144 34.685 34.685 1 0.83401 0.84952 0 10376000 5043300 5332800 27410 1959 10332 10619 42931 42931 NVQLPEVTINEETALAEVNLK 21 1 0 Unmodified _NVQLPEVTINEETALAEVNLK_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1166.6283 2 1162.62083 2323.22711 57279.89 0.20506 0.00023841 -0.63533 -0.00073865 -0.43027 -0.00050024 1163.12152747836 1166.6280328416 121.83 0.39333 121.83 121.68 122.08 0 123 26 7 0 0 0 1.0132E-05 1 80712 48.527 48.527 1 0.80527 0.82737 0 11698000 5652800 6045300 27411 1959 10332 10619 42932 42932 NVQLQENEIR 10 0 1 Unmodified _NVQLQENEIR_ 0 0 0 A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5 A0A024RBP2 A0A024RBP2 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8314 2 621.825483 1241.63641 76647.66 0.7529 0.00046817 0.1824 0.00011342 0.9353 0.00058159 621.825575572556 626.829573178121 44.222 0.92425 44.222 43.786 44.71 0 380 82 7 0 0 0 7.8981E-12 3 23578 141.2 101.19 1 1.8621 2.1386 0 139920000 49530000 90395000 27412 343 10333 10620 42933;42934;42935 42934 NVQLQENEIR 10 0 1 Unmodified _NVQLQENEIR_ 0 0 0 A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5 A0A024RBP2 A0A024RBP2 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8295 2 621.825483 1241.63641 77651.82 0.66714 0.00041484 0.19499 0.00012125 0.86212 0.00053609 621.825859818656 626.829588529141 43.434 0.7421 43.434 43.2 43.943 0 305 59 9 0 0 0 1.8297E-16 3 23558 158.87 118.87 1 1.8381 2.1244 0 258060000 86933000 171130000 27413 343 10333 10620 42936;42937;42938 42936 NVQLQENEIR 10 0 1 Unmodified _NVQLQENEIR_ 0 0 0 A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5 A0A024RBP2 A0A024RBP2 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.8299 2 621.825483 1241.63641 77062.63 0.32359 0.00020121 0.18426 0.00011457 0.50784 0.00031579 621.825638408748 626.829637255265 51.908 1.2319 51.908 51.604 52.836 -3.8147E-06 340 96 8 0 0 0 5.006E-06 2 24937 108.98 70.015 1 3.0128 2.628 0 36674000 8892800 27781000 27414 343 10333 10620 42939;42940 42939 NVQLTENEIR 10 0 1 Unmodified _NVQLTENEIR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.3246 2 608.320034 1214.62551 NaN NaN NaN 0.48462 0.0002948 NaN NaN NaN NaN 49.74 0.70929 49.74 49.387 50.097 0 0 0 0 1.819E-15 1 27363 132.9 90.79 1 NaN NaN 0 38296000 0 38296000 27415 1632 10334 10621 42941 42941 NVQLTENEIR 10 0 1 Unmodified _NVQLTENEIR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.3241 2 608.320034 1214.62551 NaN NaN NaN 0.28923 0.00017594 NaN NaN NaN NaN 48.386 0.53777 48.386 48.177 48.714 0 0 0 0 2.2312E-08 1 27010 116.52 54.522 1 NaN NaN 0 30242000 0 30242000 27416 1632 10334 10621 42942 42942 NVQLTENEIR 10 0 1 Unmodified _NVQLTENEIR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.325 2 608.320034 1214.62551 NaN NaN NaN 0.50022 0.0003043 NaN NaN NaN NaN 57.582 1.0319 57.582 57.107 58.139 0 0 0 0 0.00010339 1 29156 96.331 54.222 1 NaN NaN 0 4028800 0 4028800 27417 1632 10334 10621 42943 42943 NVQLVCSEHGLDNK 14 1 0 Unmodified _NVQLVCSEHGLDNK_ 0 0 0 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.8996 2 806.891029 1611.7675 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.287 1 41.287 40.787 41.787 3.8147E-06 0 0 0 0.0024097 1 21736 63.408 44.165 1 27418 1984 10335 10622 42944 42944 NVQLVCSEHGLDNK 14 1 0 Unmodified _NVQLVCSEHGLDNK_ 0 0 0 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.8972 2 806.891029 1611.7675 NaN NaN NaN 0.20831 0.00016809 NaN NaN NaN NaN 40.367 0.16729 40.367 40.305 40.472 0 0 0 0 0.0017426 1 21553 68.536 43.15 1 NaN NaN 0 5176200 0 5176200 27419 1984 10335 10622 42945 42945 NVQSVSIIDTELK 13 1 0 Unmodified _NVQSVSIIDTELK_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.3953 2 723.395938 1444.77732 72137.13 0.81771 0.00059153 -0.23818 -0.0001723 0.57953 0.00041923 723.395677444564 727.402666270316 90.096 0.58858 90.096 89.901 90.49 7.6294E-06 190 47 7 0 0 0 3.4365E-14 1 54347 136.48 136.48 1 1.6349 1.8415 0 74330000 31938000 42392000 27420 1763 10336 10623 42946 42946 NVQSVSIIDTELK 13 1 0 Unmodified _NVQSVSIIDTELK_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.3967 2 723.395938 1444.77732 72525.82 0.60733 0.00043934 -0.36107 -0.00026119 0.24626 0.00017814 723.395560100999 727.402764036267 89.159 0.72882 89.159 88.949 89.678 0 238 58 8 0 0 0 2.6401E-13 2 54968 126.67 126.67 1 1.4842 1.693 0 152720000 55679000 97036000 27421 1763 10336 10623 42947;42948 42947 NVQSVSIIDTELK 13 1 0 Unmodified _NVQSVSIIDTELK_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.3969 2 723.395938 1444.77732 71163.16 0.70282 0.00050841 -0.081308 -5.8818E-05 0.62151 0.0004496 723.395680420374 727.904814492669 103.3 0.58247 103.3 103.09 103.67 0 142 36 5 0 0 0 0.00013105 1 58734 79.693 79.693 1 0.99409 0.77111 0 14056000 7289900 6765800 27422 1763 10336 10623 42949 42949 NVQSVSIIDTELK 13 1 0 Unmodified _NVQSVSIIDTELK_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.3966 2 723.395938 1444.77732 71667.49 0.47705 0.0003451 -0.35304 -0.00025538 0.12402 8.9714E-05 723.39581784424 727.402604303264 103.15 0.70441 103.15 102.88 103.58 0 192 48 6 0 0 0 0.00014585 1 57743 83.397 83.397 1 1.1719 0.95594 0 7836200 3022200 4814000 27423 1763 10336 10623 42950 42950 NVSGFPQYPTGQEK 14 1 0 Unmodified _NVSGFPQYPTGQEK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.3754 2 776.375537 1550.73652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.437 1 60.437 59.937 60.937 -3.8147E-06 0 0 0 0.0010233 1 34492 77.124 51.465 1 27424 2100 10337 10624 42951 42951 NVSGFPQYPTGQEK 14 1 0 Unmodified _NVSGFPQYPTGQEK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.8847 2 776.375537 1550.73652 70083.95 0.43423 0.00033713 0.129 0.00010015 0.56323 0.00043727 776.374601111687 780.383027394639 70.375 0.52274 70.375 70.166 70.689 0 90 34 5 0 0 0 0.003354 2 36866 47.288 45.535 1 3.0021 2.4494 0 2646900 836220 1810700 27425 2100 10337 10624 42952;42953 42952 NVSGFPQYPTGQEK 14 1 0 Unmodified _NVSGFPQYPTGQEK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.885 2 776.375537 1550.73652 71119.88 0.2434 0.00018897 0.11334 8.7994E-05 0.35674 0.00027697 776.374682974674 780.382919598708 70.93 0.43368 70.93 70.723 71.157 0 120 33 5 0 0 0 0.0024938 3 36442 48.741 48.741 1 2.5336 2.0492 0 2972400 1105100 1867300 27426 2100 10337 10624 42954;42955;42956 42955 NVSIVAFYIYEQTK 14 1 0 Unmodified _NVSIVAFYIYEQTK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 841.9486 2 837.940513 1673.86647 65610.06 1.006 0.00084293 0.63161 0.00052925 1.6376 0.0013722 838.443349926133 841.947697039945 130.31 0.89514 130.31 130.05 130.94 0 182 38 8 0 0 0 2.3537E-05 2 78079 97.121 97.121 1 1.8936 1.5457 0 7977900 2683600 5294300 27427 2070 10338 10625 42957;42958 42957 NVSSFPDDATSPLQENR 17 0 1 Unmodified _NVSSFPDDATSPLQENR_ 0 0 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 944.4441 2 938.937219 1875.85988 63591.04 0.58875 0.0005528 0.088978 8.3544E-05 0.67773 0.00063634 938.937213411352 943.94150879499 76.334 0.65468 76.334 76.012 76.666 0 283 52 7 0 0 0 2.2808E-07 2 44817 107.99 107.99 1 1.3044 1.3652 0 39032000 15822000 23210000 27428 769 10339 10626 42959;42960 42959 NVSSFPDDATSPLQENR 17 0 1 Unmodified _NVSSFPDDATSPLQENR_ 0 0 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.9401 2 938.937219 1875.85988 63304.86 0.54216 0.00050906 -0.025331 -2.3784E-05 0.51683 0.00048527 939.438629740462 943.941280334496 75.415 0.61891 75.415 75.131 75.75 0 306 55 7 0 0 0 1.1785E-07 2 45305 125.53 125.29 1 1.2429 1.3954 0 45696000 21757000 23939000 27429 769 10339 10626 42961;42962 42962 NVSSFPDDATSPLQENR 17 0 1 Unmodified _NVSSFPDDATSPLQENR_ 0 0 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 943.9413 2 938.937219 1875.85988 62779.05 0.55719 0.00052317 -0.02791 -2.6206E-05 0.52928 0.00049696 939.438802524815 943.940961662589 87.317 0.86145 87.317 87.053 87.914 -7.6294E-06 260 49 9 0 0 0 0.00011296 2 47222 68.044 68.044 1 0.63625 0.51417 0 11498000 6335600 5162900 27430 769 10339 10626 42963;42964 42964 NVSVQYR 7 0 1 Unmodified _NVSVQYR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.2307 2 433.229959 864.445365 91802.27 -0.042692 -1.8495E-05 0.31244 0.00013536 0.26974 0.00011686 433.230562754246 438.234718996751 25.869 0.62363 25.869 25.453 26.077 0 84 33 6 0 0 0 0.013268 1 11414 103.29 55.112 1 1.2107 1.2385 0 33194000 17108000 16086000 27431 1565 10340 10627 42965 42965 NVTAIQGPGGK 11 1 0 Unmodified _NVTAIQGPGGK_ 0 0 0 H0YMU3;B4DJB4;H0YL72;B4DSY4;Q53GF8;P50213;H0YLI6;H0YKD0;H0YM64 H0YMU3 H0YMU3 IDH3A Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.2884 2 521.288005 1040.56146 82362.75 0.41735 0.00021756 0.0066208 3.4513E-06 0.42397 0.00022101 521.288327235335 525.294984358028 27.749 0.38447 27.749 27.538 27.923 0 99 25 5 0 0 0 0.0011047 3 12872 70.056 70.056 1 1.881 1.9407 0 29008000 10436000 18572000 27432 987 10341 10628 42966;42967;42968 42968 NVTAIQGPGGK 11 1 0 Unmodified _NVTAIQGPGGK_ 0 0 0 H0YMU3;B4DJB4;H0YL72;B4DSY4;Q53GF8;P50213;H0YLI6;H0YKD0;H0YM64 H0YMU3 H0YMU3 IDH3A Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.2879 2 521.288005 1040.56146 NaN NaN NaN -4.0431 -0.0021076 NaN NaN NaN NaN 27.352 0.64677 27.352 27.059 27.706 0 0 0 0 0.0020784 1 12606 78.06 57.579 1 NaN NaN 0 16957000 16957000 0 27433 987 10341 10628 42969 42969 NVTDEQEGFAEGFVR 15 0 1 Unmodified _NVTDEQEGFAEGFVR_ 0 0 0 P05412;Q6FHK0 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 854.3962 2 849.391916 1696.76928 65088.64 0.82752 0.00070289 0.21287 0.00018081 1.0404 0.0008837 849.391578817387 854.39621562402 85.269 0.73963 85.269 85.02 85.76 0 236 60 6 0 0 0 8.0527E-06 3 51091 115.14 111.84 1 0.94905 0.96657 0 30118000 17945000 12174000 27434 1447 10342 10629 42970;42971;42972 42970 NVTDEQEGFAEGFVR 15 0 1 Unmodified _NVTDEQEGFAEGFVR_ 0 0 0 P05412;Q6FHK0 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.3923 2 849.391916 1696.76928 66250.4 0.77291 0.0006565 -0.4726 -0.00040142 0.30031 0.00025508 849.39150189684 854.394865957272 97.614 1.0696 97.614 97.141 98.21 0 259 65 8 0 0 0 0.00021588 1 54842 75.479 74.951 1 1.1025 0.94866 0 7102300 3625800 3476500 27435 1447 10342 10629 42973 42973 NVTDEQEGFAEGFVR 15 0 1 Unmodified _NVTDEQEGFAEGFVR_ 0 0 0 P05412;Q6FHK0 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.3962 2 849.391916 1696.76928 66515.65 0.53547 0.00045483 -0.025859 -2.1964E-05 0.50961 0.00043286 849.893622256242 854.395758497993 97.593 0.87982 97.593 97.167 98.047 0 246 48 8 0 0 0 0.0001931 3 54150 91.914 88.614 1 1.042 0.86358 0 7859600 3854700 4004900 27436 1447 10342 10629 42974;42975;42976 42975 NVTDVVNTCHDAGISK 16 1 0 Unmodified _NVTDVVNTCHDAGISK_ 0 0 0 Q9Y3I0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.9493 3 577.277309 1728.8101 80188.87 0.29595 0.00017084 0.52492 0.00030303 0.82087 0.00047387 577.277545167185 579.949181400736 46.016 0.4612 46.016 45.8 46.261 0 186 42 6 0 0 0 0.00034978 1 24719 42.382 40.295 1 1.1147 1.2008 0 33674000 17884000 15790000 27437 2137 10343 10630 42977 42977 NVTDVVNTCHDAGISK 16 1 0 Unmodified _NVTDVVNTCHDAGISK_ 0 0 0 Q9Y3I0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.4206 2 865.412325 1728.8101 66337.41 0.50802 0.00043964 0.030733 2.6596E-05 0.53875 0.00046624 865.412785809922 869.921049989118 45.993 0.40151 45.993 45.8 46.201 0 128 37 6 0 0 0 1.9096E-17 3 24740 128.95 128.95 1 1.0733 1.1447 0 32022000 17521000 14501000 27438 2137 10343 10630 42978;42979;42980 42978 NVTDVVNTCHDAGISK 16 1 0 Unmodified _NVTDVVNTCHDAGISK_ 0 0 0 Q9Y3I0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.4216 2 865.412325 1728.8101 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.14 1 46.14 45.64 46.64 0 0 0 0 0.0098427 1 24890 45.915 36.961 1 27439 2137 10343 10630 42981 42981 NVTDVVNTCHDAGISK 16 1 0 Unmodified _NVTDVVNTCHDAGISK_ 0 0 0 Q9Y3I0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.4199 2 865.412325 1728.8101 65952.78 0.72848 0.00063044 -0.056819 -4.9172E-05 0.67166 0.00058127 865.412385141127 869.419242605603 44.847 0.40958 44.847 44.653 45.062 0 147 31 7 0 0 0 1.5513E-24 3 24480 139.86 139.86 1 1.1428 1.251 0 40721000 19108000 21613000 27440 2137 10343 10630 42982;42983;42984 42983 NVTDVVNTCHDAGISK 16 1 0 Unmodified _NVTDVVNTCHDAGISK_ 0 0 0 Q9Y3I0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.9496 3 577.277309 1728.8101 81965 0.74845 0.00043206 -0.75528 -0.00043601 -0.0068349 -3.9456E-06 577.277124621065 579.948403180688 44.846 0.40386 44.846 44.638 45.042 0 147 30 6 0 0 0 0.0005783 1 24494 34.87 33.552 1 1.2065 1.2336 0 31603000 12702000 18901000 27441 2137 10343 10630 42985 42985 NVTDVVNTCHDAGISK 16 1 0 Unmodified _NVTDVVNTCHDAGISK_ 0 0 0 Q9Y3I0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.9496 3 577.277309 1728.8101 82115.84 0.31211 0.00018017 0.087511 5.0518E-05 0.39962 0.00023069 577.277617176171 579.948736869913 53.948 0.50925 53.948 53.69 54.199 0 141 34 6 0 0 0 0.017345 1 26269 22.803 22.803 1 1.2478 1.0113 0 2678300 1172800 1505500 27442 2137 10343 10630 42986 42986 NVTELNEPLSNEER 14 0 1 Unmodified _NVTELNEPLSNEER_ 0 0 0 B4DE78;B3KNB4;P61981;B4DHC4 B4DE78 B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.4022 2 822.397198 1642.77984 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.455 1 59.455 58.955 59.955 0 0 0 0 1.2304E-06 1 33875 101.53 51.425 1 27443 912 10344 10631 42987 42987 NVTELNEPLSNEER 14 0 1 Unmodified _NVTELNEPLSNEER_ 0 0 0 B4DE78;B3KNB4;P61981;B4DHC4 B4DE78 B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.3964 2 822.397198 1642.77984 NaN NaN NaN -0.37826 -0.00031108 NaN NaN NaN NaN 58.18 0.097862 58.18 58.129 58.227 -3.8147E-06 0 0 0 0.0022679 1 33777 66.267 48.831 1 NaN NaN 0 2999600 2999600 0 27444 912 10344 10631 42988 42988 NVTELNEPLSNEER 14 0 1 Unmodified _NVTELNEPLSNEER_ 0 0 0 B4DE78;B3KNB4;P61981;B4DHC4 B4DE78 B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.4007 2 822.397198 1642.77984 68582.77 0.6259 0.00051474 -0.19048 -0.00015665 0.43542 0.00035809 822.397496067981 827.401322771949 69.116 0.49343 69.116 68.87 69.364 0 82 33 4 0 0 0 0.001905 2 36256 50.354 44.747 1 1.4371 1.2466 0 2117600 1035100 1082500 27445 912 10344 10631 42989;42990 42990 NVTELNEPLSNEER 14 0 1 Unmodified _NVTELNEPLSNEER_ 0 0 0 B4DE78;B3KNB4;P61981;B4DHC4 B4DE78 B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.4012 2 822.397198 1642.77984 71880.09 0.68713 0.0005651 -0.59376 -0.0004883 0.093377 7.6793E-05 822.397631487553 827.401202535487 69.715 0.50155 69.715 69.461 69.963 0 102 34 4 0 0 0 0.044084 1 35778 27.149 21.543 1 1.3579 1.2213 0 2253100 1079700 1173300 27446 912 10344 10631 42991 42991 NVTICPNPEDTCDFAR 16 0 1 Unmodified _NVTICPNPEDTCDFAR_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.9216 2 954.914375 1907.8142 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.692 1 78.692 78.192 79.192 0 0 0 0 0.0064285 1 47747 50.207 41.903 1 27447 1396 10345 10632 42992 42992 NVTLPAVFK 9 1 0 Unmodified _NVTLPAVFK_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.8022 2 494.794935 987.575317 85858.5 0.36995 0.00018305 -1.3013 -0.00064388 -0.93135 -0.00046083 494.795075389294 498.801871257523 93.082 1.114 93.082 92.624 93.738 0 675 96 9 0 0 0 0.002124 3 57610 76.478 66.961 1 0.75323 0.88972 0 1198900000 640620000 558280000 27448 1548 10346 10633 42993;42994;42995 42993 NVTLPAVFK 9 1 0 Unmodified _NVTLPAVFK_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.8022 2 494.794935 987.575317 NaN NaN NaN -0.039149 -1.937E-05 NaN NaN NaN NaN 107.51 1.9822 107.51 107.11 109.09 0 0 0 0 0.019876 1 61512 58.981 53.322 1 NaN NaN 0 60921000 0 60921000 27449 1548 10346 10633 42996 42996 NVTLPAVFK 9 1 0 Unmodified _NVTLPAVFK_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.8019 2 494.794935 987.575317 NaN NaN NaN 0.2197 0.0001087 NaN NaN NaN NaN 107.26 1.865 107.26 106.83 108.7 0 0 0 0 0.033076 1 60451 52.482 47.747 1 NaN NaN 0 55866000 0 55866000 27450 1548 10346 10633 42997 42997 NVTQIEPFCLETDR 14 0 1 Unmodified _NVTQIEPFCLETDR_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 861.4154 2 861.411794 1720.80903 65513.66 0.56153 0.00048371 -0.32997 -0.00028424 0.23156 0.00019947 861.913100557363 866.415942733108 110.62 0.39366 110.62 110.43 110.83 0 93 19 7 0 0 0 0.028181 1 63033 31.639 25.399 1 1.8943 1.6353 0 3410300 998410 2411900 27451 1837 10347 10634 42998 42998 NVTQIEPFCLETDRR 15 0 2 Unmodified _NVTQIEPFCLETDRR_ 0 0 1 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.9778 3 626.643992 1876.91015 76242.91 0.81374 0.00050993 0.10517 6.5904E-05 0.91891 0.00057583 626.644386736058 633.316271040131 82.783 0.6574 82.783 82.326 82.984 0 222 53 6 0 0 0 5.5838E-05 1 49413 54.598 50.694 1 0.57455 0.62022 0 18352000 10067000 8285900 27452 1837 10348 10635 42999 42999 NVTQIEPFCLETDRR 15 0 2 Unmodified _NVTQIEPFCLETDRR_ 0 0 1 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.3171 3 626.643992 1876.91015 75037.05 0.63097 0.00039539 -0.07664 -4.8026E-05 0.55433 0.00034737 626.643811202457 633.316149992342 94.267 0.88203 94.267 93.768 94.65 -7.6294E-06 288 55 9 0 0 0 0.00033872 2 52665 37.555 35.316 1 1.2639 1.0618 0 12304000 5152300 7151600 27453 1837 10348 10635 43000;43001 43000 NVTQIEPFCLETDRR 15 0 2 Unmodified _NVTQIEPFCLETDRR_ 0 0 1 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.3166 3 626.643992 1876.91015 75782.43 0.74575 0.00046732 -0.02204 -1.3811E-05 0.72371 0.00045351 626.978162597144 633.316325871335 94.079 0.76231 94.079 93.785 94.547 0 317 49 9 0 0 0 0.0050456 1 51766 36.445 36.445 1 1.2575 1.1499 0 9457200 4233800 5223400 27454 1837 10348 10635 43002 43002 NVVDSSQKPTPSAR 14 1 1 Unmodified _NVVDSSQKPTPSAR_ 0 0 1 Q03164;E9PR05;B3W6H7;Q8N6B4;Q1HA41 Q03164 Q03164 KMT2A;TET1-MLL;MLL/CALM fusion;MLL-MAML2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.3873 2 743.386436 1484.75832 NaN NaN NaN -4.3299 -0.0032188 NaN NaN NaN NaN 19.148 0.17031 19.148 19.025 19.196 1.9073E-06 0 0 0 0.0038843 1 5567 81.239 46.039 1 NaN NaN 0 18418000 18418000 0 27455 1680 10349 10636 43003 43003 NVVDSSQKPTPSAR 14 1 1 Unmodified _NVVDSSQKPTPSAR_ 0 0 1 Q03164;E9PR05;B3W6H7;Q8N6B4;Q1HA41 Q03164 Q03164 KMT2A;TET1-MLL;MLL/CALM fusion;MLL-MAML2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.3987 2 743.386436 1484.75832 NaN NaN NaN 0.44093 0.00032778 NaN NaN NaN NaN 20.323 0.33738 20.323 20.202 20.54 0 0 0 0 0.039332 1 5763 63.611 53.923 1 NaN NaN 0 3063800 0 3063800 27456 1680 10349 10636 43004 43004 NVVDSSQKPTPSAR 14 1 1 Unmodified _NVVDSSQKPTPSAR_ 0 0 1 Q03164;E9PR05;B3W6H7;Q8N6B4;Q1HA41 Q03164 Q03164 KMT2A;TET1-MLL;MLL/CALM fusion;MLL-MAML2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 752.4007 2 743.386436 1484.75832 NaN NaN NaN 0.32219 0.00023951 NaN NaN NaN NaN 20.304 0.2752 20.304 20.181 20.457 0 0 0 0 0.04188 1 5254 62.924 45.488 1 NaN NaN 0 3825800 0 3825800 27457 1680 10349 10636 43005 43005 NVVHQLSVTLEDLYNGATR 19 0 1 Unmodified _NVVHQLSVTLEDLYNGATR_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.0416 3 710.371037 2128.09128 72046.79 0.89795 0.00063788 -0.30126 -0.00021401 0.59669 0.00042387 710.371077149515 714.041319348884 131.79 0.76009 131.79 131.32 132.08 1.5259E-05 217 49 7 0 0 0 5.7858E-11 4 85837 100.02 100.02 1 1.114 1.1233 0 15623000 7416500 8206700 27458 1535 10350 10637 43006;43007;43008;43009 43006 NVVHQLSVTLEDLYNGATR 19 0 1 Unmodified _NVVHQLSVTLEDLYNGATR_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.3721 3 710.371037 2128.09128 72889.32 0.78178 0.00055536 0.06498 4.616E-05 0.84676 0.00060152 710.705272328653 713.707183285698 129.59 0.3212 129.59 129.38 129.7 0 51 18 5 0 0 0 0.0031608 1 86599 25.916 25.916 1 0.92624 0.93515 0 5690500 2260500 3430000 27459 1535 10350 10637 43010 43010 NVVHQLSVTLEDLYNGATR 19 0 1 Unmodified _NVVHQLSVTLEDLYNGATR_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.7094 3 710.371037 2128.09128 74312.56 0.91546 0.00065032 -1.2839 -0.00091207 -0.36847 -0.00026175 710.704616308558 713.707267966105 131.64 0.45119 131.64 131.43 131.88 1.5259E-05 109 33 7 0 0 0 0.0011448 2 88055 33.405 33.405 1 1.0884 1.1254 0 4722900 2300700 2422200 27460 1535 10350 10637 43011;43012 43011 NVVHQLSVTLEDLYNGATR 19 0 1 Unmodified _NVVHQLSVTLEDLYNGATR_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.042 3 710.371037 2128.09128 NaN NaN NaN -1.8593 -0.0013208 NaN NaN NaN NaN 129.76 0.54594 129.76 129.6 130.14 0 0 0 0 0.00098624 1 86904 45.257 37.069 1 NaN NaN 0 8582400 0 8582400 27461 1535 10350 10637 43013 43013 NVVHQLSVTLEDLYNGATR 19 0 1 Unmodified _NVVHQLSVTLEDLYNGATR_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.0417 3 710.371037 2128.09128 NaN NaN NaN -0.19134 -0.00013592 NaN NaN NaN NaN 130.32 0.81699 130.32 130.05 130.87 1.5259E-05 0 0 0 0.00097833 1 87511 45.347 34.531 1 NaN NaN 0 5561400 0 5561400 27462 1535 10350 10637 43014 43014 NVVHQLSVTLEDLYNGATR 19 0 1 Unmodified _NVVHQLSVTLEDLYNGATR_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.7073 3 710.371037 2128.09128 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.13 1 129.13 128.63 129.63 0 0 0 0 0.00084008 1 86234 58.123 48.024 1 27463 1535 10350 10637 43015 43015 NVVHQLSVTLEDLYNGATR 19 0 1 Unmodified _NVVHQLSVTLEDLYNGATR_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.0427 3 710.371037 2128.09128 72104.21 1.0333 0.000734 -0.29628 -0.00021047 0.73698 0.00052353 710.705219882665 713.706990445592 133.24 0.5524 133.24 133.06 133.61 0 142 24 9 0 0 0 3.2334E-06 2 81069 72.883 72.883 1 0.8198 0.68816 0 26134000 14339000 11796000 27464 1535 10350 10637 43016;43017 43016 NVVHQLSVTLEDLYNGATR 19 0 1 Unmodified _NVVHQLSVTLEDLYNGATR_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.0424 3 710.371037 2128.09128 71742.34 1.1575 0.00082224 -0.22142 -0.00015729 0.93607 0.00066495 710.370992961781 714.041235850222 132.88 0.31927 132.88 132.7 133.02 0 104 14 8 0 0 0 8.59E-06 2 79898 57.41 57.41 1 0.77448 0.63943 0 8196400 4814300 3382100 27465 1535 10350 10637 43018;43019 43018 NVVMFVAQVLVGK 13 1 0 Oxidation (M) _NVVM(ox)FVAQVLVGK_ NVVM(1)FVAQVLVGK NVVM(71.35)FVAQVLVGK 0 1 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.413 2 710.405055 1418.79556 75782.76 0.95411 0.00067781 0.29158 0.00020714 1.2457 0.00088494 710.906688277764 714.41223728502 130.42 0.51215 130.42 130.25 130.76 0 100 33 5 0 0 0 8.8435E-05 1 84977 71.349 71.349 1 2.3195 2.4514 0 3786600 1367100 2419500 27466 1873 10351 10638 43020 43020 1724 NVVMFVAQVLVGK 13 1 0 Oxidation (M) _NVVM(ox)FVAQVLVGK_ NVVM(1)FVAQVLVGK NVVM(108.67)FVAQVLVGK 0 1 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.4134 2 710.405055 1418.79556 74382.27 0.70909 0.00050374 0.074712 5.3076E-05 0.78381 0.00055682 710.906796117189 714.412435738322 129.9 0.47845 129.9 129.75 130.23 0 126 33 6 0 0 0 1.547E-06 2 86797 108.67 108.67 1 2.403 2.3952 0 6411700 1606300 4805400 27467 1873 10351 10638 43021;43022 43021 1724 NVVMVNQGLTK 11 1 0 Oxidation (M) _NVVM(ox)VNQGLTK_ NVVM(1)VNQGLTK NVVM(73.07)VNQGLTK 0 1 0 P14635;E9PC90;H1UBN2 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.8297 2 609.82918 1217.64381 78772.78 0.55765 0.00034007 -0.43864 -0.0002675 0.11901 7.2575E-05 609.829358407415 613.836492895862 43.791 0.67652 43.791 43.473 44.149 0 287 59 7 0 0 0 0.00034473 4 23566 73.067 61.219 1 0.96371 1.0213 0 31354000 17422000 13932000 27468 1483 10352 10639 43023;43024;43025;43026 43026 1243 NVVMVNQGLTK 11 1 0 Oxidation (M) _NVVM(ox)VNQGLTK_ NVVM(1)VNQGLTK NVVM(73.07)VNQGLTK 0 1 0 P14635;E9PC90;H1UBN2 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.3304 2 609.82918 1217.64381 76764.08 0.86097 0.00052504 -0.36204 -0.00022078 0.49893 0.00030426 609.829127809134 613.83617954271 43.231 0.61386 43.231 42.88 43.494 0 268 50 7 0 0 0 0.00034473 2 23288 73.067 73.067 1 0.98292 1.108 0 67726000 30940000 36786000 27469 1483 10352 10639 43027;43028 43027 1243 NVVMVNQGLTK 11 1 0 Oxidation (M) _NVVM(ox)VNQGLTK_ NVVM(1)VNQGLTK NVVM(43.96)VNQGLTK 0 1 0 P14635;E9PC90;H1UBN2 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 609.8297 2 609.82918 1217.64381 76010.79 0.28223 0.00017211 -0.21032 -0.00012826 0.071909 4.3852E-05 609.829217094557 613.836435562582 50.662 0.59921 50.662 50.354 50.953 -3.8147E-06 207 43 6 0 0 0 0.0097307 1 24823 43.958 43.958 1 0.80822 0.62826 0 3407100 1908000 1499100 27470 1483 10352 10639 43029 43029 1243 NVVMVNQGLTK 11 1 0 Oxidation (M) _NVVM(ox)VNQGLTK_ NVVM(1)VNQGLTK NVVM(42.74)VNQGLTK 0 1 0 P14635;E9PC90;H1UBN2 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.8369 2 609.82918 1217.64381 78475.96 0.2087 0.00012727 -0.30388 -0.00018531 -0.095181 -5.8044E-05 609.829040199281 613.836308027023 51.005 0.68669 51.005 50.635 51.322 3.8147E-06 194 45 6 0 0 0 0.010884 1 24370 42.743 34.7 1 0.76379 0.61908 0 2728500 1346800 1381800 27471 1483 10352 10639 43030 43030 1243 NVVTIFSAPNYCYR 14 0 1 Unmodified _NVVTIFSAPNYCYR_ 0 0 0 Q6I9T8;B3KUN1;P67775;B3KQ51;Q8WZ56;Q5U0I7;B3KRM2;A0A140VJS0;P62714;H0YC23 Q6I9T8 Q6I9T8 PPP2CA;PPP2CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.9163 2 852.41414 1702.81373 66706.9 0.47148 0.0004019 -0.81904 -0.00069816 -0.34756 -0.00029626 852.413788049524 857.417400855158 102.62 0.55252 102.62 102.35 102.91 -7.6294E-06 152 47 5 0 0 0 0.00015299 2 63160 91.855 77.949 1 1.2406 1.3022 0 11909000 6349700 5559400 27472 948 10353 10640 43031;43032 43031 NVVTIFSAPNYCYR 14 0 1 Unmodified _NVVTIFSAPNYCYR_ 0 0 0 Q6I9T8;B3KUN1;P67775;B3KQ51;Q8WZ56;Q5U0I7;B3KRM2;A0A140VJS0;P62714;H0YC23 Q6I9T8 Q6I9T8 PPP2CA;PPP2CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.9183 2 852.41414 1702.81373 NaN NaN NaN -1.7919 -0.0015275 NaN NaN NaN NaN 101.93 0.43941 101.93 101.68 102.12 0 0 0 0 5.7874E-06 2 64260 93.058 77.486 1 NaN NaN 0 7091900 0 7091900 27473 948 10353 10640 43033;43034 43034 NVVTIFSAPNYCYR 14 0 1 Unmodified _NVVTIFSAPNYCYR_ 0 0 0 Q6I9T8;B3KUN1;P67775;B3KQ51;Q8WZ56;Q5U0I7;B3KRM2;A0A140VJS0;P62714;H0YC23 Q6I9T8 Q6I9T8 PPP2CA;PPP2CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 857.4194 2 852.41414 1702.81373 NaN NaN NaN -1.2206 -0.0010405 NaN NaN NaN NaN 114.43 0.30037 114.43 114.24 114.54 7.6294E-06 0 0 0 0.019165 1 65900 45.879 34.974 1 NaN NaN 0 1457400 0 1457400 27474 948 10353 10640 43035 43035 NVVVVDGVR 9 0 1 Unmodified _NVVVVDGVR_ 0 0 0 P55084;B4DY96;B5MD38;F5GZQ3;D6W539;C9JEY0;C9JE81;C9K0M0 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.7847 2 478.779816 955.545079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.541 1 48.541 48.041 49.041 0 0 0 0 0.0068692 1 27177 66.692 31.397 1 27475 1615 10354 10641 43036 43036 NVYLFPGIPELLR 13 0 1 Unmodified _NVYLFPGIPELLR_ 0 0 0 Q5T196;B3KQW9;Q8NFF5 Q5T196 Q5T196 FLAD1 FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.4181 2 765.937576 1529.8606 70285.66 0.17138 0.00013126 0.46455 0.00035582 0.63593 0.00048708 766.439579595843 770.942300771875 133.38 0.26218 133.38 133.26 133.53 0 15 6 4 0 0 0 0.0045228 1 89572 61.353 61.353 1 4.3287 4.3581 0 10792000 3467100 7324600 27476 931 10355 10642 43037 43037 NWFGLPGR 8 0 1 Unmodified _NWFGLPGR_ 0 0 0 CON__Q3ZBS7 CON__Q3ZBS7 CON__Q3ZBS7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.7489 2 473.748319 945.482085 NaN NaN NaN -0.015522 -7.3536E-06 NaN NaN NaN NaN 95.928 0.93123 95.928 95.493 96.425 0 0 0 0 0.044709 1 58166 52.018 36.797 1 NaN NaN 0 14414000 14414000 0 + 27477 1173 10356 10643 43038 43038 NWLLLSDVLK 10 1 0 Unmodified _NWLLLSDVLK_ 0 0 0 H7C2V9;A6NE70;B3KTC2;H9A532;Q6W2J9 H7C2V9 H7C2V9 BCOR BCL-6 corepressor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.8533 2 600.852981 1199.69141 83290.63 1.1279 0.00067767 -0.31998 -0.00019226 0.80788 0.00048541 600.852895374819 604.859693410916 126.94 0.34988 126.94 126.76 127.11 0 46 20 3 0 0 0 0.016374 1 82641 48.283 45.305 1 0.63429 0.72759 0 1649500 945190 704330 27478 678 10357 10644 43039 43039 NWLLLSDVLK 10 1 0 Unmodified _NWLLLSDVLK_ 0 0 0 H7C2V9;A6NE70;B3KTC2;H9A532;Q6W2J9 H7C2V9 H7C2V9 BCOR BCL-6 corepressor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.854 2 600.852981 1199.69141 82129.38 1.0246 0.00061564 -0.17849 -0.00010725 0.84613 0.0005084 601.354261341926 604.859986461164 126.51 0.41191 126.51 126.27 126.68 0 72 24 4 0 0 0 0.009241 1 84307 54.982 51.637 1 0.71074 0.78392 0 2887300 1844900 1042400 27479 678 10357 10644 43040 43040 NWPFLEGCACTPER 14 0 1 Unmodified _NWPFLEGCACTPER_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.3875 2 868.879607 1735.74466 65539.84 0.66699 0.00057954 -0.15772 -0.00013704 0.50927 0.0004425 868.879719760227 873.884091949046 99.853 0.86623 99.853 99.45 100.32 0 440 74 8 0 0 0 0.00019921 2 61105 69.451 62.918 1 0.69862 0.71472 0 32147000 20745000 11402000 27480 498 10358 10645 43041;43042 43042 NWPFLEGCACTPER 14 0 1 Unmodified _NWPFLEGCACTPER_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.3812 2 868.879607 1735.74466 65342.37 0.65277 0.00056718 -0.25604 -0.00022247 0.39673 0.00034471 869.38096375692 873.884009103053 99.094 0.90538 99.094 98.691 99.597 -7.6294E-06 440 76 8 0 0 0 0.00023365 2 61899 64.55 63.139 1 0.73985 0.82376 0 43635000 25092000 18543000 27481 498 10358 10645 43043;43044 43044 NWPFLEGCACTPER 14 0 1 Unmodified _NWPFLEGCACTPER_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.382 2 868.879607 1735.74466 63904.92 0.76523 0.00066489 -0.2941 -0.00025554 0.47113 0.00040935 869.38114972265 873.883786374715 112.23 0.92164 112.23 111.91 112.83 0 312 51 9 0 0 0 0.0014992 4 65037 53.252 53.252 1 1.1751 0.98106 0 23443000 10627000 12816000 27482 498 10358 10645 43045;43046;43047;43048 43045 NWPFLEGCACTPER 14 0 1 Unmodified _NWPFLEGCACTPER_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 873.8846 2 868.879607 1735.74466 65013.9 0.36653 0.00031847 -0.035105 -3.0502E-05 0.33143 0.00028797 869.381447236499 873.884012788851 112.09 0.87778 112.09 111.78 112.66 -7.6294E-06 317 47 10 0 0 0 0.00086228 2 64098 57.802 57.225 1 1.1413 0.99148 0 24304000 11222000 13081000 27483 498 10358 10645 43049;43050 43050 NWQNVR 6 0 1 Unmodified _NWQNVR_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.7094 2 408.709194 815.403835 93392.38 -0.14875 -6.0794E-05 0.44348 0.00018125 0.29473 0.00012046 408.709322143612 413.713349911527 24.411 0.8133 24.411 24.216 25.029 0 128 37 7 0 0 0 0.040624 1 10098 107.29 35.942 1 0.81978 0.9694 0 273900000 148900000 125000000 27484 1651 10359 10646 43051 43051 NWVVVGGLNTHYR 13 0 1 Unmodified _NWVVVGGLNTHYR_ 0 0 0 X6RJ73;Q96A35;X6RHI2 X6RJ73 X6RJ73 MRPL24 39S ribosomal protein L24, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.9 2 757.896774 1513.779 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.8 1 77.8 77.3 78.3 0 0 0 0 0.01593 1 47106 50.284 40.503 1 27485 1957 10360 10647 43052 43052 NYDIGAALDTIQYSK 15 1 0 Unmodified _NYDIGAALDTIQYSK_ 0 0 0 Q13501;B4E3V2;Q13502 Q13501 Q13501 SQSTM1 Sequestosome-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 840.4207 2 836.414859 1670.81517 NaN NaN NaN 0.40345 0.00033745 NaN NaN NaN NaN 105.46 0.51151 105.46 105.21 105.72 0 0 0 0 0.0020411 1 65181 64.121 46.257 1 NaN NaN 0 8774500 0 8774500 27486 1714 10361 10648 43053 43053 NYDIGAALDTIQYSK 15 1 0 Unmodified _NYDIGAALDTIQYSK_ 0 0 0 Q13501;B4E3V2;Q13502 Q13501 Q13501 SQSTM1 Sequestosome-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.4158 2 836.414859 1670.81517 NaN NaN NaN -0.4839 -0.00040474 NaN NaN NaN NaN 104.91 0.33456 104.91 104.75 105.08 7.6294E-06 0 0 0 0.0027903 2 66502 62.088 34.973 1 NaN NaN 0 3693500 3693500 0 27487 1714 10361 10648 43054;43055 43055 NYDIGAALDTIQYSK 15 1 0 Unmodified _NYDIGAALDTIQYSK_ 0 0 0 Q13501;B4E3V2;Q13502 Q13501 Q13501 SQSTM1 Sequestosome-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.4212 2 836.414859 1670.81517 66640.36 0.34345 0.00028727 -0.26617 -0.00022263 0.077277 6.4636E-05 836.915164415513 840.422551497848 116.95 0.60154 116.95 116.53 117.13 7.6294E-06 63 23 5 0 0 0 1.7301E-05 1 68759 87.498 81.653 1 2.1305 1.6756 0 3989100 1125300 2863800 27488 1714 10361 10648 43056 43056 NYDPALHPFEVPR 13 0 1 Unmodified _NYDPALHPFEVPR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9;E5RHM4 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.8884 2 777.888615 1553.76268 70057.12 0.97508 0.00075851 -0.61116 -0.00047542 0.36392 0.00028309 777.887969670674 783.393928458647 80.901 0.65327 80.901 80.551 81.204 0 214 55 5 0 0 0 0.00013155 1 48214 79.82 67.954 1 0.93504 0.94925 0 27850000 15252000 12598000 27489 402 10362 10649 43057 43057 NYDPALHPFEVPR 13 0 1 Unmodified _NYDPALHPFEVPR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9;E5RHM4 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.929 3 518.928169 1553.76268 85406.76 0.64536 0.0003349 0.49924 0.00025907 1.1446 0.00059396 519.262555316003 522.264297766953 80.89 1.0913 80.89 80.432 81.523 0 495 93 9 0 0 0 0.0002415 1 48255 49.482 49.482 1 0.88021 0.97817 0 73301000 35930000 37371000 27490 402 10362 10649 43058 43058 NYDPALHPFEVPR 13 0 1 Unmodified _NYDPALHPFEVPR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9;E5RHM4 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.9289 3 518.928169 1553.76268 84909.17 0.52738 0.00027367 0.4169 0.00021634 0.94428 0.00049001 518.928112298231 522.264267550763 79.243 0.91986 79.243 78.799 79.719 0 437 77 8 0 0 0 9.9955E-05 2 48029 52.265 52.265 1 0.85022 0.97524 0 51811000 27461000 24350000 27491 402 10362 10649 43059;43060 43060 NYDPALHPFEVPR 13 0 1 Unmodified _NYDPALHPFEVPR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9;E5RHM4 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.264 3 518.928169 1553.76268 84125.8 0.41027 0.0002129 -0.0056417 -2.9276E-06 0.40462 0.00020997 518.928187698437 522.26410952448 91.728 0.76166 91.728 91.47 92.232 0 336 51 9 0 0 0 0.0017074 2 50929 47.201 35.931 1 1.3282 1.0947 0 18434000 8274000 10160000 27492 402 10362 10649 43061;43062 43062 NYDPALHPFEVPR 13 0 1 Unmodified _NYDPALHPFEVPR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9;E5RHM4 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.9284 3 518.928169 1553.76268 83761.15 0.24196 0.00012556 -0.080174 -4.1604E-05 0.16178 8.3954E-05 518.928099920685 522.264107711012 91.427 0.87611 91.427 91.153 92.029 0 331 58 9 0 0 0 0.0076628 2 49902 37.013 32.544 1 1.3455 1.1241 0 16203000 7501700 8701100 27493 402 10362 10649 43063;43064 43064 NYEDEDSLK 9 1 0 Unmodified _NYEDEDSLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.741 2 556.740751 1111.46695 81220.03 0.43367 0.00024144 -0.16488 -9.1793E-05 0.26879 0.00014965 556.74067567269 560.747690223234 26.671 1.6422 26.671 26.004 27.646 1.9073E-06 447 98 11 0 0 0 2.6269E-05 2 11891 112.84 106.02 1 0.7186 0.85559 0 634550000 357330000 277220000 27494 1471 10363 10650 43065;43066 43065 NYEDEDSLK 9 1 0 Unmodified _NYEDEDSLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.7411 2 556.740751 1111.46695 80506.13 0.42944 0.00023909 0.025767 1.4345E-05 0.4552 0.00025343 556.740703069765 560.747750943645 26.225 1.223 26.225 25.745 26.968 1.9073E-06 314 68 10 0 0 0 1.656E-06 2 11630 136.27 125.2 1 0.77707 0.91438 0 384410000 209930000 174470000 27495 1471 10363 10650 43067;43068 43068 NYEDEDSLK 9 1 0 Unmodified _NYEDEDSLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.7483 2 556.740751 1111.46695 80789.97 0.33322 0.00018552 -0.098921 -5.5073E-05 0.2343 0.00013045 556.740917800088 560.747725205931 30.43 2.3227 30.43 30.034 32.357 1.9073E-06 661 137 11 0 0 0 0.0087237 2 12484 60.828 56.894 1 1.3462 1.1794 0 199690000 86987000 112700000 27496 1471 10363 10650 43069;43070 43069 NYEDEDSLK 9 1 0 Unmodified _NYEDEDSLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.7481 2 556.740751 1111.46695 80421.46 0.36717 0.00020442 0.19959 0.00011112 0.56675 0.00031554 556.740816300972 560.747850340333 30.634 1.1324 30.634 30.371 31.503 0 227 60 9 0 0 0 0.0023856 2 12251 74.464 70.108 1 1.3346 1.0698 0 19446000 8233900 11212000 27497 1471 10363 10650 43071;43072 43072 NYEEALR 7 0 1 Unmodified _NYEEALR_ 0 0 0 A0A024R705;Q9UN37;I3L4J1 A0A024R705 A0A024R705 VPS4A Vacuolar protein sorting-associated protein 4A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.7249 2 447.719424 893.424296 NaN NaN NaN 1.8578 0.00083179 NaN NaN NaN NaN 29.536 0.27028 29.536 29.381 29.652 -1.9073E-06 0 0 0 0.045012 1 14265 60.788 27.895 1 NaN NaN 0 5833400 0 5833400 27498 213 10364 10651 43073 43073 NYEGSPIK 8 1 0 Unmodified _NYEGSPIK_ 0 0 0 E5RI98 E5RI98 E5RI98 NPM1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2363 2 454.229625 906.444697 88125.86 0.43056 0.00019557 0.023378 1.0619E-05 0.45394 0.00020619 454.229309984488 458.23646857729 26.257 0.41027 26.257 26.059 26.469 0 91 26 5 0 0 0 0.013918 1 11682 64.207 49.432 1 0.97614 0.96441 0 25562000 12366000 13196000 27499 1213 10365 10652 43074 43074 NYEGSPIK 8 1 0 Unmodified _NYEGSPIK_ 0 0 0 E5RI98 E5RI98 E5RI98 NPM1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.2374 2 454.229625 906.444697 NaN NaN NaN -0.44791 -0.00020345 NaN NaN NaN NaN 25.957 0.33923 25.957 25.702 26.042 0 0 0 0 0.013769 1 11447 71.501 55.357 1 NaN NaN 0 22757000 0 22757000 27500 1213 10365 10652 43075 43075 NYEVRPEMLK 10 1 1 Oxidation (M) _NYEVRPEM(ox)LK_ NYEVRPEM(1)LK NYEVRPEM(72.64)LK 0 1 1 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8268 2 647.826637 1293.63872 74881.24 0.60378 0.00039115 0.082352 5.335E-05 0.68613 0.00044449 647.826701788239 656.837619092503 34.103 0.26862 34.103 33.956 34.225 0 58 24 4 0 0 0 0.0014072 1 17006 72.643 54.203 1 2.1129 2.2609 0 13264000 4011900 9251700 27501 780 10366 10653 43076 43076 610 NYEVRPEMLK 10 1 1 Oxidation (M) _NYEVRPEM(ox)LK_ NYEVRPEM(1)LK NYEVRPEM(61.59)LK 0 1 1 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.8271 2 647.826637 1293.63872 75052.3 0.60559 0.00039232 0.44847 0.00029053 1.0541 0.00068285 647.826739874212 656.838064049011 33.095 0.2557 33.095 32.952 33.208 0 66 23 4 0 0 0 0.003714 1 16509 61.593 49.638 1 1.6966 1.9127 0 14293000 5418700 8874200 27502 780 10366 10653 43077 43077 610 NYFLEEDNYK 10 1 0 Unmodified _NYFLEEDNYK_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8 2 667.7986 1333.58265 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.216 1 68.216 67.716 68.716 0 0 0 0 0.01807 1 40484 54.608 47.72 1 27503 1119 10367 10654 43078 43078 NYGFQIHTK 9 1 0 Unmodified _NYGFQIHTK_ 0 0 0 J3KSW8;U6FSN9;Q6WCQ1;B9EGI2;Q8N236;F6WMF4;F6WYE2;F6TR96;H0Y5J9;A0A1S5UZ31;Q9H2D6 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene;TRIOBP Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein;TRIO and F-actin-binding protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.2895 2 554.282723 1106.55089 NaN NaN NaN -0.13977 -7.747E-05 NaN NaN NaN NaN 39.761 0.31321 39.761 39.637 39.95 3.8147E-06 0 0 0 0.0089987 1 20658 67.507 30.938 1 NaN NaN 0 5098700 0 5098700 27504 1330 10368 10655 43079 43079 NYGFQIHTK 9 1 0 Unmodified _NYGFQIHTK_ 0 0 0 J3KSW8;U6FSN9;Q6WCQ1;B9EGI2;Q8N236;F6WMF4;F6WYE2;F6TR96;H0Y5J9;A0A1S5UZ31;Q9H2D6 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene;TRIOBP Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein;TRIO and F-actin-binding protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.2902 2 554.282723 1106.55089 NaN NaN NaN -0.74609 -0.00041354 NaN NaN NaN NaN 45.32 0.3305 45.32 45.128 45.459 3.8147E-06 0 0 0 0.04947 1 21104 47.198 21.304 1 NaN NaN 0 974240 0 974240 27505 1330 10368 10655 43080 43080 NYGFVHIEDK 10 1 0 Unmodified _NYGFVHIEDK_ 0 0 0 A8K9U0;Q9BWF3;E9PB51;Q9BQ04;E9PLB0;E9PM61;D6R9K7;U3KQD5;J3QRR5 A8K9U0 A8K9U0 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.8065 2 611.29857 1220.58259 75722.68 0.53116 0.0003247 0.35828 0.00021901 0.88943 0.00054371 611.298335520503 615.80776811951 53.719 0.33885 53.719 53.582 53.921 -3.8147E-06 86 26 5 0 0 0 0.00032108 2 30074 90.108 90.108 1 1.1168 1.0942 0 22300000 9853300 12447000 27506 788 10369 10656 43081;43082 43081 NYGGTVAVTESGHTCQR 17 0 1 Unmodified _NYGGTVAVTESGHTCQR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 918.9193 2 918.918306 1835.82206 NaN NaN NaN -0.51482 -0.00047308 NaN NaN NaN NaN 26.701 0.26427 26.701 26.571 26.835 0 0 0 0 1.0188E-36 1 12015 155.14 142.98 1 NaN NaN 0 28130000 28130000 0 + 27507 1157 10370 10657 43083 43083 NYGGTVAVTESGHTCQR 17 0 1 Unmodified _NYGGTVAVTESGHTCQR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.9479 3 612.947963 1835.82206 NaN NaN NaN -0.44103 -0.00027033 NaN NaN NaN NaN 26.699 0.23258 26.699 26.555 26.787 0 0 0 0 1.4383E-05 1 12046 63.691 57.911 1 NaN NaN 0 15763000 15763000 0 + 27508 1157 10370 10657 43084 43084 NYGGTVAVTESGHTCQR 17 0 1 Unmodified _NYGGTVAVTESGHTCQR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.4213 2 918.918306 1835.82206 NaN NaN NaN -0.2541 -0.0002335 NaN NaN NaN NaN 26.202 0.32544 26.202 26.063 26.389 0 0 0 0 7.5384E-145 1 11662 237.41 225.25 1 NaN NaN 0 21608000 21608000 0 + 27509 1157 10370 10657 43085 43085 NYGGTVAVTESGHTCQR 17 0 1 Unmodified _NYGGTVAVTESGHTCQR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.9475 3 612.947963 1835.82206 NaN NaN NaN 0.038249 2.3445E-05 NaN NaN NaN NaN 26.209 0.27254 26.209 26.084 26.356 0 0 0 0 3.3207E-07 1 11699 62.94 57.281 1 NaN NaN 0 17076000 17076000 0 + 27510 1157 10370 10657 43086 43086 NYGGTVAVTESGHTCQR 17 0 1 Unmodified _NYGGTVAVTESGHTCQR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.2824 3 612.947963 1835.82206 NaN NaN NaN -0.79672 -0.00048835 NaN NaN NaN NaN 30.827 0.46222 30.827 30.659 31.122 -1.9073E-06 0 0 0 0.014817 1 12813 26.837 21.935 1 NaN NaN 0 9753400 9753400 0 + 27511 1157 10370 10657 43087 43087 NYGGTVAVTESGHTCQR 17 0 1 Unmodified _NYGGTVAVTESGHTCQR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 919.4209 2 918.918306 1835.82206 NaN NaN NaN 0.027609 2.537E-05 NaN NaN NaN NaN 31.038 0.40452 31.038 30.831 31.235 1.9073E-06 0 0 0 0.00092086 1 12458 62.035 56.651 1 NaN NaN 0 16365000 16365000 0 + 27512 1157 10370 10657 43088 43088 NYGGTVAVTESGHTCQR 17 0 1 Unmodified _NYGGTVAVTESGHTCQR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.2811 3 612.947963 1835.82206 NaN NaN NaN -0.81519 -0.00049967 NaN NaN NaN NaN 31.027 0.40204 31.027 30.85 31.252 0 0 0 0 0.0024674 1 12465 40.844 34.681 1 NaN NaN 0 12106000 12106000 0 + 27513 1157 10370 10657 43089 43089 NYHPIVVPGLGR 12 0 1 Unmodified _NYHPIVVPGLGR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3764 2 661.372404 1320.73025 75915.27 0.39994 0.00026451 0.24477 0.00016188 0.64471 0.0004264 661.372548213761 666.376789279273 73.726 0.54046 73.726 73.452 73.992 0 140 44 4 0 0 0 0.00058999 2 44228 68.735 68.735 1 0.85024 0.85149 0 18771000 10462000 8309600 27514 1699 10371 10658 43090;43091 43090 NYHPIVVPGLGR 12 0 1 Unmodified _NYHPIVVPGLGR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.3765 2 661.372404 1320.73025 75405.38 0.6671 0.0004412 -0.47673 -0.0003153 0.19037 0.0001259 661.372345959958 666.376500682734 85.125 0.62074 85.125 84.896 85.516 0 116 41 5 0 0 0 0.062654 1 45758 30.564 30.564 1 1.3417 1.1832 0 1885000 711500 1173500 27515 1699 10371 10658 43092 43092 NYILDQTNVYGSAQR 15 0 1 Unmodified _NYILDQTNVYGSAQR_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.4336 2 871.428832 1740.84311 66874.14 0.70226 0.00061197 -0.021009 -1.8308E-05 0.68125 0.00059366 871.930467044744 876.934301352746 76.135 0.44559 76.135 75.874 76.319 0 130 36 6 0 0 0 2.2506E-10 3 44760 119.45 119.45 1 0.99587 1.0188 0 14546000 7113900 7431700 27516 49 10372 10659 43093;43094;43095 43093 NYILDQTNVYGSAQR 15 0 1 Unmodified _NYILDQTNVYGSAQR_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.9319 2 871.428832 1740.84311 65886.92 0.44433 0.0003872 0.14608 0.0001273 0.5904 0.0005145 871.428884529606 876.432887193225 75.179 0.44151 75.179 74.983 75.425 0 143 38 5 0 0 0 9.4333E-23 2 45301 149.38 149.38 1 1.1079 1.0949 0 15105000 7040400 8064300 27517 49 10372 10659 43096;43097 43097 NYILDQTNVYGSAQR 15 0 1 Unmodified _NYILDQTNVYGSAQR_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 876.4338 2 871.428832 1740.84311 67852.19 0.39118 0.00034088 0.045721 3.9843E-05 0.4369 0.00038073 871.429041600207 876.433109386921 86.98 0.48769 86.98 86.777 87.265 0 84 27 5 0 0 0 0.0038979 1 47747 40.767 40.767 1 0.90641 0.79613 0 1808300 1078300 730050 27518 49 10372 10659 43098 43098 NYILDQTNVYGSAQR 15 0 1 Unmodified _NYILDQTNVYGSAQR_ 0 0 0 M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;Q9BUJ2;A8K5K0 M0R3F1 M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 876.4297 2 871.428832 1740.84311 66636.88 0.2653 0.00023119 0.40927 0.00035665 0.67457 0.00058784 871.429310832114 876.433257621117 87.173 0.43071 87.173 86.948 87.378 7.6294E-06 93 23 5 0 0 0 0.0023181 2 47027 45.257 39.533 1 0.92457 0.81372 0 2482400 1267000 1215400 27519 49 10372 10659 43099;43100 43099 NYIQGINLVQAK 12 1 0 Unmodified _NYIQGINLVQAK_ 0 0 0 Q96Q74;B4DLN1;P52815 Q96Q74 Q96Q74 MRPL7/L12;MRPL12 39S ribosomal protein L12, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.8906 2 680.882801 1359.75105 75787.36 0.7545 0.00051372 0.19191 0.00013067 0.9464 0.00064439 680.882893653347 684.890226321548 86.814 0.43974 86.814 86.63 87.069 7.6294E-06 107 30 5 0 0 0 0.00019051 3 52302 76.827 76.827 1 0.56743 0.58406 0 10775000 6780500 3994700 27520 998 10373 10660 43101;43102;43103 43101 NYIQGINLVQAK 12 1 0 Unmodified _NYIQGINLVQAK_ 0 0 0 Q96Q74;B4DLN1;P52815 Q96Q74 Q96Q74 MRPL7/L12;MRPL12 39S ribosomal protein L12, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.8829 2 680.882801 1359.75105 76894.3 0.85582 0.00058272 0.080482 5.4799E-05 0.93631 0.00063751 680.882956519269 684.890012330855 85.878 0.33874 85.878 85.664 86.002 0 73 23 4 0 0 0 0.00044949 2 52860 70.816 62.581 1 0.93125 0.92957 0 14728000 7580900 7146600 27521 998 10373 10660 43104;43105 43104 NYLEGIYNVPVAAVR 15 0 1 Unmodified _NYLEGIYNVPVAAVR_ 0 0 0 A0A024RCB2;Q16540;H7C2P7;B2R9J4;A6NJD9;A8MVT4;A8MYK1 A0A024RCB2 A0A024RCB2 MRPL23 39S ribosomal protein L23, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.4555 2 839.451579 1676.88861 NaN NaN NaN -0.93104 -0.00078156 NaN NaN NaN NaN 109.96 0.39389 109.96 109.74 110.13 0 0 0 0 0.0026509 1 70586 62.466 48.047 1 NaN NaN 0 5688000 0 5688000 27522 357 10374 10661 43106 43106 NYLEGIYNVPVAAVR 15 0 1 Unmodified _NYLEGIYNVPVAAVR_ 0 0 0 A0A024RCB2;Q16540;H7C2P7;B2R9J4;A6NJD9;A8MVT4;A8MYK1 A0A024RCB2 A0A024RCB2 MRPL23 39S ribosomal protein L23, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 844.4534 2 839.451579 1676.88861 68667.64 0.77613 0.00065153 -0.064006 -5.373E-05 0.71213 0.0005978 839.45221928183 844.455086009184 121.65 0.27956 121.65 121.51 121.79 7.6294E-06 53 14 5 0 0 0 0.0024037 2 72438 54.471 54.471 1 1.1076 0.9409 0 2880100 1413400 1466700 27523 357 10374 10661 43107;43108 43107 NYLEGIYNVPVAAVR 15 0 1 Unmodified _NYLEGIYNVPVAAVR_ 0 0 0 A0A024RCB2;Q16540;H7C2P7;B2R9J4;A6NJD9;A8MVT4;A8MYK1 A0A024RCB2 A0A024RCB2 MRPL23 39S ribosomal protein L23, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 844.4563 2 839.451579 1676.88861 68226.66 0.80002 0.00067158 0.1032 8.6628E-05 0.90321 0.0007582 839.451296003922 844.455832539888 121.45 0.29504 121.45 121.34 121.64 -7.6294E-06 68 16 6 0 0 0 0.0071305 1 71372 45.915 45.915 1 1.7158 1.4966 0 2593300 1029100 1564200 27524 357 10374 10661 43109 43109 NYLNFVSPLPDIVGQK 16 1 0 Unmodified _NYLNFVSPLPDIVGQK_ 0 0 0 B3KMX4;B3KND7;B4DM04;Q9Y2X9 B3KMX4 B3KMX4 ZNF281 Zinc finger protein 281 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 906.8123 2 902.485619 1802.95669 65443.32 0.76691 0.00069212 0.32387 0.00029228 1.0908 0.00098441 902.486104424003 906.993930928363 123.92 0.32858 123.92 123.78 124.11 -7.6294E-06 66 22 4 0 0 0 0.0036738 1 82390 55.452 55.452 1 0.83283 0.86499 0 4656500 2208600 2447900 27525 909 10375 10662 43110 43110 NYLSLAPLFFK 11 1 0 Unmodified _NYLSLAPLFFK_ 0 0 0 A0A087WYN6;Q6PK82;O14617 A0A087WYN6 A0A087WYN6 AP3D1 AP-3 complex subunit delta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.8758 2 656.868631 1311.72271 84752.18 1.0528 0.00069156 0.10254 6.7358E-05 1.1554 0.00075891 656.869046274487 660.875511527274 128.77 0.26941 128.77 128.58 128.85 -1.5259E-05 32 14 5 0 0 0 0.013734 1 83947 47.198 47.198 1 3.8772 4.3124 0 2576700 875680 1701000 27526 434 10376 10663 43111 43111 NYLSLAPLFFK 11 1 0 Unmodified _NYLSLAPLFFK_ 0 0 0 A0A087WYN6;Q6PK82;O14617 A0A087WYN6 A0A087WYN6 AP3D1 AP-3 complex subunit delta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.8761 2 656.868631 1311.72271 80608.53 0.80885 0.00053131 0.59579 0.00039136 1.4046 0.00092266 657.370441339961 660.875830188109 128.36 0.23982 128.36 128.16 128.4 0 48 14 6 0 0 0 0.0015992 3 85727 66.27 58.676 1 1.4905 1.6151 0 3557900 1054100 2503700 27527 434 10376 10663 43112;43113;43114 43112 NYPATVHGALLSGLR 15 0 1 Unmodified _NYPATVHGALLSGLR_ 0 0 0 A8K2R3;O60341;R4GMP9 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.9597 3 523.622968 1567.84708 84047.35 0.14315 7.4954E-05 0.51775 0.00027111 0.6609 0.00034606 523.623145849309 526.959251169014 76.707 0.49733 76.707 76.421 76.918 0 135 37 6 0 0 0 0.0078808 1 46332 29.077 20.257 1 0.94421 0.92919 0 14447000 8466000 5981100 27528 711 10377 10664 43115 43115 NYPATVHGALLSGLR 15 0 1 Unmodified _NYPATVHGALLSGLR_ 0 0 0 A8K2R3;O60341;R4GMP9 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.9593 3 523.622968 1567.84708 83736.66 0.37141 0.00019448 -0.66956 -0.0003506 -0.29815 -0.00015612 524.290149780301 526.959096249648 89.327 0.54432 89.327 89.104 89.648 0 126 34 6 0 0 0 0.043942 2 49374 17.701 17.701 1 0.9586 0.82935 0 2609100 1318200 1290900 27529 711 10377 10664 43116;43117 43116 NYPDPVSIIQK 11 1 0 Unmodified _NYPDPVSIIQK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3506 2 637.342978 1272.6714 NaN NaN NaN 0.069534 4.4317E-05 NaN NaN NaN NaN 88.163 0.58131 88.163 87.783 88.364 0 0 0 0 0.0046185 1 54449 65.933 45.936 1 NaN NaN 0 10191000 0 10191000 27530 1561 10378 10665 43118 43118 NYQQNYQNSESGEK 14 1 0 Unmodified _NYQQNYQNSESGEK_ 0 0 0 P67809;Q6PKI6;Q7KZ24;H0Y449;A0JLU4;C9J5V9;Q2VIK8 P67809 P67809 YBX1 Nuclease-sensitive element-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.8682 2 844.86098 1687.70741 66498.7 0.69426 0.00058655 0.10262 8.6695E-05 0.79688 0.00067325 844.860974796043 848.868446565767 17.549 0.29318 17.549 17.421 17.714 0 64 11 8 0 0 0 1.8403E-114 2 4664 244.01 237.77 1 2.5293 2.48 0 20669000 5630800 15039000 27531 1657 10379 10666 43119;43120 43119 NYQSQADIPIR 11 0 1 Unmodified _NYQSQADIPIR_ 0 0 0 Q14966;D6W5H1;A8K583;A0A096LPH6;B4DF54 Q14966 Q14966 ZNF638 Zinc finger protein 638 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.8389 2 652.833308 1303.65206 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.04 1 56.04 55.54 56.54 -3.8147E-06 0 0 0 0.00068453 1 31548 72.607 56.067 1 27532 1746 10380 10667 43121 43121 NYQSQADIPIR 11 0 1 Unmodified _NYQSQADIPIR_ 0 0 0 Q14966;D6W5H1;A8K583;A0A096LPH6;B4DF54 Q14966 Q14966 ZNF638 Zinc finger protein 638 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.8383 2 652.833308 1303.65206 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.195 1 55.195 54.695 55.695 -3.8147E-06 0 0 0 0.00068224 1 31615 72.643 59.064 1 27533 1746 10380 10667 43122 43122 NYSDGSETSSEFSK 14 1 0 Unmodified _NYSDGSETSSEFSK_ 0 0 0 Q9H4L5 Q9H4L5 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.8281 2 769.318082 1536.62161 72947.69 0.84647 0.00065121 -0.017656 -1.3583E-05 0.82882 0.00063762 769.318067714584 773.324962945301 28.855 0.22395 28.855 28.759 28.983 0 33 11 4 0 0 0 3.8972E-05 2 13758 94.767 92.826 1 1.1307 1.1512 0 4515800 1772500 2743300 27534 2032 10381 10668 43123;43124 43123 NYSDGSETSSEFSK 14 1 0 Unmodified _NYSDGSETSSEFSK_ 0 0 0 Q9H4L5 Q9H4L5 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.8192 2 769.318082 1536.62161 70388.81 0.66152 0.00050892 -0.015636 -1.2029E-05 0.64589 0.00049689 769.819357687344 773.826118371659 28.116 0.092251 28.116 28.056 28.149 1.9073E-06 12 4 4 0 0 0 0.00020579 1 13341 68.515 64.217 1 0.88503 0.93187 0 4330500 2811400 1519100 27535 2032 10381 10668 43125 43125 NYSDGSETSSEFSK 14 1 0 Unmodified _NYSDGSETSSEFSK_ 0 0 0 Q9H4L5 Q9H4L5 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.3248 2 769.318082 1536.62161 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.137 1 28.137 27.637 28.637 0 0 0 0 0.0010233 1 13340 77.124 67.17 1 27536 2032 10381 10668 43126 43126 NYSPYYNTIDDLK 13 1 0 Unmodified _NYSPYYNTIDDLK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.3764 2 803.375203 1604.73585 NaN NaN NaN 0.043985 3.5336E-05 NaN NaN NaN NaN 84.987 1.5932 84.987 84.56 86.153 0 0 0 0 8.5719E-23 2 50776 143.5 136.12 1 NaN NaN 0 619540000 619540000 0 + 27537 1165 10382 10669 43127;43128 43127 NYSPYYNTIDDLK 13 1 0 Unmodified _NYSPYYNTIDDLK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.3768 2 803.375203 1604.73585 NaN NaN NaN 1.3477 0.0010827 NaN NaN NaN NaN 86.234 0.38634 86.234 86.09 86.476 0 0 0 0 0.0051753 1 52059 58.676 52.293 1 NaN NaN 0 7215400 7215400 0 + 27538 1165 10382 10669 43129 43129 NYSPYYNTIDDLK 13 1 0 Unmodified _NYSPYYNTIDDLK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.9351 2 803.375203 1604.73585 NaN NaN NaN 1.3175 0.0010585 NaN NaN NaN NaN 86.573 0.41227 86.573 86.476 86.889 0 0 0 0 0.0057954 1 52095 56.359 49.334 1 NaN NaN 0 3961200 3961200 0 + 27539 1165 10382 10669 43130 43130 NYSPYYNTIDDLK 13 1 0 Unmodified _NYSPYYNTIDDLK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.3757 2 803.375203 1604.73585 NaN NaN NaN 0.10798 8.6746E-05 NaN NaN NaN NaN 83.959 1.2127 83.959 83.582 84.795 0 0 0 0 1.8438E-38 1 51404 167.12 157.79 1 NaN NaN 0 504770000 504770000 0 + 27540 1165 10382 10669 43131 43131 NYSPYYNTIDDLK 13 1 0 Unmodified _NYSPYYNTIDDLK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.3762 2 803.375203 1604.73585 NaN NaN NaN 0.47773 0.0003838 NaN NaN NaN NaN 84.083 1.4874 84.083 84.038 85.526 0 0 0 0 4.4297E-29 1 51940 147.74 140.62 1 NaN NaN 0 521500000 521500000 0 + 27541 1165 10382 10669 43132 43132 NYSPYYNTIDDLK 13 1 0 Unmodified _NYSPYYNTIDDLK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.3759 2 803.375203 1604.73585 NaN NaN NaN -0.094469 -7.5894E-05 NaN NaN NaN NaN 97.757 2.3053 97.757 97.329 99.634 0 0 0 0 0.0035797 2 55434 64.64 60.594 1 NaN NaN 0 163330000 163330000 0 + 27542 1165 10382 10669 43133;43134 43134 NYSPYYNTIDDLK 13 1 0 Unmodified _NYSPYYNTIDDLK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.376 2 803.375203 1604.73585 NaN NaN NaN 0.28842 0.00023171 NaN NaN NaN NaN 97.639 2.197 97.639 97.265 99.462 7.6294E-06 0 0 0 0.0043355 2 54918 61.815 57.475 1 NaN NaN 0 136770000 136770000 0 + 27543 1165 10382 10669 43135;43136 43136 NYTDEAIETDDLTIK 15 1 0 Unmodified _NYTDEAIETDDLTIK_ 0 0 0 Q05DH1;A0A0K0K1K4;O14818;H0Y586 Q05DH1 Q05DH1 PSMA7 Proteasome subunit alpha type;Proteasome subunit alpha type-7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.9208 2 870.912347 1739.81014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.194 1 87.194 86.694 87.694 7.6294E-06 0 0 0 0.0015153 1 52637 71.208 54.83 1 27544 539 10383 10670 43137 43137 NYTDEAIETDDLTIK 15 1 0 Unmodified _NYTDEAIETDDLTIK_ 0 0 0 Q05DH1;A0A0K0K1K4;O14818;H0Y586 Q05DH1 Q05DH1 PSMA7 Proteasome subunit alpha type;Proteasome subunit alpha type-7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.9198 2 870.912347 1739.81014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.219 1 87.219 86.719 87.719 0 0 0 0 0.003532 1 52653 54.871 43.338 1 27545 539 10383 10670 43138 43138 NYTDEAIETDDLTIK 15 1 0 Unmodified _NYTDEAIETDDLTIK_ 0 0 0 Q05DH1;A0A0K0K1K4;O14818;H0Y586 Q05DH1 Q05DH1 PSMA7 Proteasome subunit alpha type;Proteasome subunit alpha type-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.9185 2 870.912347 1739.81014 65924.47 0.47914 0.00041729 -0.23188 -0.00020195 0.24726 0.00021534 870.912448779793 874.918766209276 86.558 0.47392 86.558 86.267 86.741 0 105 42 4 0 0 0 4.3942E-15 2 53382 127.71 118.91 1 0.701 0.71977 0 17799000 9087600 8711900 27546 539 10383 10670 43139;43140 43140 NYTEEEDRFLICMLHK 16 1 1 Unmodified _NYTEEEDRFLICMLHK_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.3381 3 699.995925 2096.96595 72539.88 0.88985 0.00062289 -0.6644 -0.00046508 0.22545 0.00015781 700.329266760298 706.003372925385 110.79 0.52328 110.79 110.58 111.1 0 110 22 8 0 0 0 0.00060633 1 64049 45.723 44.032 1 6.1691 5.2435 0 8991400 1125800 7865500 27547 1391 10384 10671 43141 43141 NYTEEEDRFLICMLHK 16 1 1 Unmodified _NYTEEEDRFLICMLHK_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 706.3384 3 699.995925 2096.96595 72215.52 0.70889 0.00049622 -0.50884 -0.00035619 0.20005 0.00014003 700.329914407931 706.003369329722 110.54 0.62459 110.54 110.31 110.93 7.6294E-06 132 33 8 0 0 0 0.038136 1 62875 20.737 20.737 1 5.3355 4.5079 0 9570900 1495600 8075300 27548 1391 10384 10671 43142 43142 NYYEQWGK 8 1 0 Unmodified _NYYEQWGK_ 0 0 0 P22626;A0A087WUI2;I6L957 P22626 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.2535 2 544.245806 1086.47706 83386.13 0.86489 0.00047071 0.94503 0.00051433 1.8099 0.00098504 544.246138370266 548.253463125201 45.126 1.0889 45.126 44.524 45.613 0 282 97 5 0 0 0 0.011407 2 24063 69.998 69.998 1 2.2551 2.3158 0 28659000 8710900 19948000 27549 1508 10385 10672 43143;43144 43143 NYYEVHK 7 1 0 Unmodified _NYYEVHK_ 0 0 0 A0A024RC67;O43663;H0YL53 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.7367 2 476.729792 951.445031 88479.86 0.20127 9.595E-05 -0.10898 -5.1953E-05 0.092288 4.3996E-05 476.729748232003 480.736650101908 19.204 0.26109 19.204 19.096 19.357 0 51 14 5 0 0 0 0.030635 2 5895 68.422 40.315 1 0.61789 0.63331 0 28515000 17187000 11328000 27550 353 10386 10673 43145;43146 43145 NYYEVHK 7 1 0 Unmodified _NYYEVHK_ 0 0 0 A0A024RC67;O43663;H0YL53 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.7365 2 476.729792 951.445031 86255.13 -0.27297 -0.00013013 1.9938 0.0009505 1.7208 0.00082037 476.729930470947 480.736897965944 20.358 0.31054 20.358 20.202 20.513 0 39 8 8 0 0 0 0.030635 2 5809 68.422 40.315 1 1.187 0.94629 0 9632800 4919700 4713100 27551 353 10386 10673 43147;43148 43147 NYYQDTPK 8 1 0 Unmodified _NYYQDTPK_ 0 0 0 Q9Y3C1 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.7379 2 514.737814 1027.46108 84273.56 0.006348 3.2676E-06 0.26525 0.00013653 0.27159 0.0001398 514.737885498516 518.745005123894 23.224 0.57683 23.224 22.979 23.556 -1.9073E-06 135 28 8 0 0 0 0.00097085 2 9149 121.99 121.99 1 0.8724 0.96288 0 56530000 29784000 26746000 27552 2135 10387 10674 43149;43150 43150 NYYQDTPK 8 1 0 Unmodified _NYYQDTPK_ 0 0 0 Q9Y3C1 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.7451 2 514.737814 1027.46108 85760.35 0.092131 4.7423E-05 0.40041 0.0002061 0.49254 0.00025353 514.737870319003 518.745165632507 23.023 0.33608 23.023 22.843 23.179 0 56 13 6 0 0 0 0.0065363 1 8928 86.833 86.833 1 0.8266 0.87509 0 23544000 13586000 9958600 27553 2135 10387 10674 43151 43151 NYYQDTPK 8 1 0 Unmodified _NYYQDTPK_ 0 0 0 Q9Y3C1 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.7383 2 514.737814 1027.46108 85241.53 0.20529 0.00010567 0.11735 6.0403E-05 0.32263 0.00016607 514.737740912113 518.744923202205 25.845 0.50407 25.845 25.635 26.139 0 108 20 7 0 0 0 0.0035323 2 9535 96.492 96.492 1 0.85348 0.66343 0 15351000 8042600 7308300 27554 2135 10387 10674 43152;43153 43152 PAAAATGPPPGNTSSTQK 18 1 0 Unmodified _PAAAATGPPPGNTSSTQK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.9155 2 826.915558 1651.81656 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.264 1 19.264 18.764 19.764 -1.9073E-06 0 0 0 2.2592E-05 1 5964 97.911 83.492 1 27555 878 10388 10675 43154 43154 PAAAATGPPPGNTSSTQK 18 1 0 Unmodified _PAAAATGPPPGNTSSTQK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.4166 2 826.915558 1651.81656 NaN NaN NaN 0.054823 4.5334E-05 NaN NaN NaN NaN 19.209 0.26118 19.209 19.135 19.396 0 0 0 0 8.1779E-06 1 5702 81.92 66.776 1 NaN NaN 0 2538000 2538000 0 27556 878 10388 10675 43155 43155 PAAAPPPTPLR 11 0 1 Unmodified _PAAAPPPTPLR_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3166 2 544.316566 1086.61858 NaN NaN NaN -0.18858 -0.00010265 NaN NaN NaN NaN 46.568 0.54975 46.568 46.289 46.839 3.8147E-06 0 0 0 0.0026867 2 25160 76.827 56.306 1 NaN NaN 0 17457000 17457000 0 27557 1492 10389 10676 43156;43157 43157 PAAAPPPTPLR 11 0 1 Unmodified _PAAAPPPTPLR_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.3164 2 544.316566 1086.61858 82909.44 0.65579 0.00035696 -0.065691 -3.5757E-05 0.5901 0.0003212 544.316439923884 549.320841624307 45.512 0.4562 45.512 45.321 45.777 -3.8147E-06 145 39 5 0 0 0 0.014477 1 24929 46.819 40.18 1 0.47874 0.52411 0 32774000 22065000 10708000 27558 1492 10389 10676 43158 43158 PAASLAVHTDK 11 1 0 Unmodified _PAASLAVHTDK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.3084 2 555.301113 1108.58767 81064.34 0.82365 0.00045738 -1.42 -0.0007885 -0.59631 -0.00033113 555.300980205864 559.307866150532 23.064 0.58997 23.064 22.66 23.25 0 101 31 7 0 0 0 1.4046E-52 2 8995 208.11 190.87 1 0.96633 1.0416 0 41271000 20714000 20556000 27559 339 10390 10677 43159;43160 43159 PAASLAVHTDK 11 1 0 Unmodified _PAASLAVHTDK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 373.2079 3 370.536501 1108.58767 99214.07 0.36819 0.00013643 -0.013156 -4.8748E-06 0.35504 0.00013155 370.536324078887 373.207735442561 23.063 0.42863 23.063 22.887 23.316 0 112 21 8 0 0 0 0.0081327 1 9021 31.478 25.246 1 0.93566 1.0463 0 63582000 32543000 31039000 27560 339 10390 10677 43161 43161 PAASLAVHTDK 11 1 0 Unmodified _PAASLAVHTDK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.2077 3 370.536501 1108.58767 96624.62 0.13418 4.9719E-05 -0.29446 -0.00010911 -0.16028 -5.9389E-05 370.536345428546 373.207788806432 22.731 0.39539 22.731 22.541 22.937 0 112 17 8 0 0 0 0.00064521 2 8683 51.286 51.286 1 1.0485 1.1815 0 59997000 28674000 31323000 27561 339 10390 10677 43162;43163 43162 PAASLAVHTDK 11 1 0 Unmodified _PAASLAVHTDK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.3079 2 555.301113 1108.58767 81394.29 0.58382 0.0003242 -0.013277 -7.3728E-06 0.57054 0.00031682 555.300949901711 559.308206353547 22.732 0.52121 22.732 22.388 22.91 0 62 15 5 0 0 0 2.7976E-17 2 8688 160.75 160.75 1 0.96453 1.0088 0 34420000 17717000 16703000 27562 339 10390 10677 43164;43165 43164 PAASLAVHTDK 11 1 0 Unmodified _PAASLAVHTDK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.3079 2 555.301113 1108.58767 80548.9 0.3684 0.00020457 -1.0711 -0.00059477 -0.70268 -0.0003902 555.300951121554 559.306936869507 25.056 1.0547 25.056 24.82 25.875 0 106 48 5 0 0 0 0.0015567 1 9005 66.595 66.595 1 1.4092 1.101 0 3811900 1625300 2186600 27563 339 10390 10677 43166 43166 PAASLAVHTDK 11 1 0 Unmodified _PAASLAVHTDK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 373.2078 3 370.536501 1108.58767 99073.59 0.064757 2.3995E-05 -0.37988 -0.00014076 -0.31512 -0.00011676 370.536328008406 373.207689862241 24.925 0.41218 24.925 24.739 25.151 0 110 21 8 0 0 0 0.030887 1 8443 20.43 20.43 1 1.1948 0.98126 0 9397700 4047400 5350300 27564 339 10390 10677 43167 43167 PAASSPETPSAGQQEAK 17 1 0 Unmodified _PAASSPETPSAGQQEAK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.8997 2 828.397198 1654.77984 67863.98 0.45426 0.00037631 0.04313 3.5728E-05 0.49739 0.00041204 828.397165687156 832.905858830849 20.599 0.25753 20.599 20.45 20.708 0 61 11 7 0 0 0 1.5275E-12 2 6996 136.7 136.7 1 1.077 1.1194 0 16931000 7994800 8936700 27565 2059 10391 10678 43168;43169 43169 PAASSPETPSAGQQEAK 17 1 0 Unmodified _PAASSPETPSAGQQEAK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.9077 2 828.397198 1654.77984 68235.35 0.80206 0.00066442 -0.061166 -5.067E-05 0.74089 0.00061375 828.39697577279 832.404589669253 20.56 0.28406 20.56 20.381 20.665 0 46 8 7 0 0 0 1.716E-12 2 6780 146.36 146.36 1 0.92687 0.95271 0 11677000 6479200 5197900 27566 2059 10391 10678 43170;43171 43170 PAASSPETPSAGQQEAK 17 1 0 Unmodified _PAASSPETPSAGQQEAK_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.4048 2 828.397198 1654.77984 67756.54 0.42277 0.00035022 0.14543 0.00012048 0.5682 0.0004707 828.397457155342 832.404300009947 22.812 0.44154 22.812 22.617 23.059 0 81 17 8 0 0 0 0.00017872 1 6982 59.57 59.57 1 1.7372 1.3763 0 3978500 1411000 2567500 27567 2059 10391 10678 43172 43172 PAAVVAPITTGYTVK 15 1 0 Unmodified _PAAVVAPITTGYTVK_ 0 0 0 Q6NVY0;A0A024R904;Q9HB71;B4DFD3 Q6NVY0 Q6NVY0 CACYBP Calcyclin-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.4344 2 744.427042 1486.83953 71258.52 0.82092 0.00061112 0.73991 0.00055081 1.5608 0.0011619 744.428416550612 748.434499458988 85.345 0.45535 85.345 85.159 85.614 0 119 36 5 0 0 0 0.00018076 1 51199 77.593 43.707 1 4.066 4.0158 0 25422000 7044200 18378000 27568 267 10392 10679 43173 43173 PAAVVAPITTGYTVK 15 1 0 Unmodified _PAAVVAPITTGYTVK_ 0 0 0 Q6NVY0;A0A024R904;Q9HB71;B4DFD3 Q6NVY0 Q6NVY0 CACYBP Calcyclin-binding protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.4337 2 744.427042 1486.83953 NaN NaN NaN 0.46352 0.00034506 NaN NaN NaN NaN 97.671 0.56576 97.671 97.392 97.958 0 0 0 0 0.024118 1 54120 41.704 28.504 1 NaN NaN 0 1138700 0 1138700 27569 267 10392 10679 43174 43174 PADEIAVDR 9 0 1 Unmodified _PADEIAVDR_ 0 0 0 B3KTA3;Q16658 B3KTA3 B3KTA3 FSCN1 Fascin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.2496 2 493.251089 984.487624 86505.46 0.39866 0.00019664 -0.0029332 -1.4468E-06 0.39573 0.00019519 493.25047987699 498.255154246503 31.49 0.36068 31.49 31.306 31.666 0 101 31 6 0 0 0 0.0019674 1 15620 78.516 65.528 1 4.2422 4.3151 0 20474000 4804100 15670000 27570 942 10393 10680 43175 43175 PADTEPPPLLVYK 13 1 0 Unmodified _PADTEPPPLLVYK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3931 2 720.392667 1438.77078 NaN NaN NaN -0.66902 -0.00048195 NaN NaN NaN NaN 92.14 0.58255 92.14 91.804 92.387 0 0 0 0 0.00012472 1 55689 90.906 76.787 1 NaN NaN 0 18860000 18860000 0 27571 1854 10394 10681 43176 43176 PADTEPPPLLVYK 13 1 0 Unmodified _PADTEPPPLLVYK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.4006 2 720.392667 1438.77078 73428.8 1.0148 0.00073105 -0.5263 -0.00037915 0.48849 0.00035191 720.392479477596 724.399487427101 91.136 0.61478 91.136 90.917 91.532 7.6294E-06 240 54 7 0 0 0 8.997E-19 2 56388 142.83 135.45 1 0.70695 0.78315 0 46539000 25518000 21020000 27572 1854 10394 10681 43177;43178 43178 PADTEPPPLLVYK 13 1 0 Unmodified _PADTEPPPLLVYK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.3943 2 720.392667 1438.77078 73622.06 0.75682 0.00054521 0.071102 5.1221E-05 0.82792 0.00059643 720.392816269215 724.399731459208 105.29 0.50163 105.29 105 105.51 0 142 32 6 0 0 0 0.00023308 2 59991 68.893 68.893 1 0.92937 0.73681 0 4283700 2100300 2183400 27573 1854 10394 10681 43179;43180 43180 PADTEPPPLLVYK 13 1 0 Unmodified _PADTEPPPLLVYK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.3931 2 720.392667 1438.77078 74182.71 0.64676 0.00046592 -0.0078004 -5.6193E-06 0.63896 0.0004603 720.393000806854 724.399251059842 105.07 0.56288 105.07 104.75 105.31 0 147 35 6 0 0 0 0.00014249 2 58983 89.047 83.507 1 0.86916 0.683 0 3837700 2248600 1589000 27574 1854 10394 10681 43181;43182 43181 PAEEQLDVGQSK 12 1 0 Unmodified _PAEEQLDVGQSK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.8221 2 650.822606 1299.63066 NaN NaN NaN -0.5396 -0.00035118 NaN NaN NaN NaN 31.845 0.57703 31.845 31.42 31.997 0 0 0 0 0.0022507 1 15634 68.786 25.478 1 NaN NaN 0 10929000 10929000 0 27575 1681 10395 10682 43183 43183 PAEEQLDVGQSK 12 1 0 Unmodified _PAEEQLDVGQSK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8297 2 650.822606 1299.63066 75951.15 0.62918 0.00040948 -0.59717 -0.00038865 0.032009 2.0832E-05 650.8221675574 654.829582823948 31.141 0.50916 31.141 30.878 31.388 0 146 43 5 0 0 0 4.1449E-18 2 15333 146.16 146.16 1 0.51821 0.53554 0 24973000 13656000 11317000 27576 1681 10395 10682 43184;43185 43185 PAEEQLDVGQSK 12 1 0 Unmodified _PAEEQLDVGQSK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.8224 2 650.822606 1299.63066 77074.95 0.457 0.00029743 -0.27051 -0.00017606 0.18649 0.00012137 650.822335309798 654.82979299695 36.099 0.40067 36.099 35.867 36.268 0 101 32 5 0 0 0 0.027974 1 16117 36.252 29.81 1 1.1885 0.99912 0 2152400 1090100 1062400 27577 1681 10395 10682 43186 43186 PAEEQLDVGQSK 12 1 0 Unmodified _PAEEQLDVGQSK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.8228 2 650.822606 1299.63066 77988.21 0.52855 0.00034399 -0.73426 -0.00047787 -0.20571 -0.00013388 650.821929013112 654.829312655316 36.668 0.61894 36.668 36.264 36.883 0 158 53 4 0 0 0 0.016584 1 15938 42.083 42.083 1 0.78546 0.61868 0 2287600 1313600 973940 27578 1681 10395 10682 43187 43187 PAEFTVDAK 9 1 0 Unmodified _PAEFTVDAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.7496 2 489.250557 976.486562 85511.16 0.33074 0.00016181 0.16397 8.022E-05 0.4947 0.00024203 489.250678501321 493.257516798618 40.577 0.59465 40.577 40.319 40.913 0 184 39 6 0 0 0 0.0010561 1 21694 90.601 76.444 1 1.168 1.3143 0 120780000 68899000 51882000 27579 1504 10396 10683 43188 43188 PAEPPAWAGGAR 12 0 1 Unmodified _PAEPPAWAGGAR_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8044 2 590.298904 1178.58326 NaN NaN NaN 0.072439 4.2761E-05 NaN NaN NaN NaN 46.071 0.82125 46.071 45.704 46.525 -3.8147E-06 0 0 0 0.0022901 1 24795 68.335 47.465 1 NaN NaN 0 11399000 0 11399000 27580 1972 10397 10684 43189 43189 PAEPPAWAGGAR 12 0 1 Unmodified _PAEPPAWAGGAR_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.2991 2 590.298904 1178.58326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.95 1 45.95 45.45 46.45 0 0 0 0 0.01026 1 24784 56.916 29.662 1 27581 1972 10397 10684 43190 43190 PAFEEFCLPTK 11 1 0 Unmodified _PAFEEFCLPTK_ 0 0 0 A0A024R912;Q9BZX2;A0A0S2Z5Y6;A0A0S2Z601;Q9HA47 A0A024R912 A0A024R912 UCK2;UCK1 Uridine kinase;Uridine-cytidine kinase 2;Uridine-cytidine kinase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.8331 2 669.823563 1337.63257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.821 1 95.821 95.321 96.321 0 0 0 0 0.01046 1 59700 58.592 30.579 1 27582 268 10398 10685 43191 43191 PAFPGYGVQDSSPYPGR 17 0 1 Unmodified _PAFPGYGVQDSSPYPGR_ 0 0 0 Q7Z5J4;A8MXE8 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 903.433 2 897.925926 1793.8373 NaN NaN NaN 0.51187 0.00045962 NaN NaN NaN NaN 92.925 0.50168 92.925 92.569 93.07 0 0 0 0 0.0089859 1 51744 44.616 36.311 1 NaN NaN 0 1166400 0 1166400 27583 1879 10399 10686 43192 43192 PAGPTVEQQGEMAR 14 0 1 Oxidation (M) _PAGPTVEQQGEM(ox)AR_ PAGPTVEQQGEM(1)AR PAGPTVEQQGEM(149.49)AR 0 1 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.8566 2 743.851372 1485.68819 70639.41 0.63709 0.0004739 -0.16707 -0.00012428 0.47001 0.00034962 743.851456649507 748.855725247123 22.131 0.40981 22.131 22.002 22.412 -1.9073E-06 109 23 8 0 0 0 3.0099E-22 2 8274 149.49 135.56 1 2.3404 2.4174 0 23812000 6536800 17276000 27584 1611 10400 10687 43193;43194 43194 1401 PAGPTVEQQGEMAR 14 0 1 Oxidation (M) _PAGPTVEQQGEM(ox)AR_ PAGPTVEQQGEM(1)AR PAGPTVEQQGEM(159.94)AR 0 1 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.8555 2 743.851372 1485.68819 69268.88 0.27374 0.00020362 0.23484 0.00017469 0.50858 0.00037831 743.851584183045 748.855818933148 22.062 0.3731 22.062 21.89 22.263 0 80 16 8 0 0 0 2.5729E-30 1 8055 159.94 141.67 1 2.3368 2.5604 0 39933000 12658000 27275000 27585 1611 10400 10687 43195 43195 1401 PAGQNLQGIEDK 12 1 0 Unmodified _PAGQNLQGIEDK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3253 2 635.325316 1268.63608 78881.66 0.59029 0.00037503 -0.25626 -0.00016281 0.33403 0.00021222 635.325033421001 639.331627283045 33.811 0.47576 33.811 33.555 34.031 0 162 38 6 0 0 0 8.6935E-104 1 16997 244.16 244.16 1 0.38424 0.42934 0 53079000 40339000 12740000 27586 1942 10401 10688 43196 43196 PAGQNLQGIEDK 12 1 0 Unmodified _PAGQNLQGIEDK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.3325 2 635.325316 1268.63608 76405.46 0.29961 0.00019035 -0.79134 -0.00050276 -0.49173 -0.00031241 635.324596616726 639.331941149313 39.668 0.64422 39.668 39.371 40.015 0 197 48 7 0 0 0 2.7842E-74 1 18108 224.58 208.38 1 1.3957 1.1213 0 7861800 3374500 4487300 27587 1942 10401 10688 43197 43197 PAGQNLQGIEDK 12 1 0 Unmodified _PAGQNLQGIEDK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 639.3325 2 635.325316 1268.63608 77317.87 0.36402 0.00023127 -0.90586 -0.00057551 -0.54183 -0.00034424 635.324675346812 639.331845643007 39.826 0.45269 39.826 39.603 40.055 0 195 36 8 0 0 0 1.7005E-12 1 17777 126.71 118.13 1 1.0447 0.85616 0 8728500 3859900 4868600 27588 1942 10401 10688 43198 43198 PAGVLGAVNK 10 1 0 Unmodified _PAGVLGAVNK_ 0 0 0 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.284 2 463.276909 924.539266 NaN NaN NaN 0.10612 4.9165E-05 NaN NaN NaN NaN 39.857 0.32006 39.857 39.721 40.041 0 0 0 0 0.003548 1 21217 76.134 63.086 1 NaN NaN 0 6791500 0 6791500 27589 1270 10402 10689 43199 43199 PAHVVVGDVLQAADVDK 17 1 0 Unmodified _PAHVVVGDVLQAADVDK_ 0 0 0 V9HWI1;P30043;M0QZL1;M0R192 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.9835 3 578.312459 1731.91555 NaN NaN NaN 0.47481 0.00027459 NaN NaN NaN NaN 83.08 0.25032 83.08 82.908 83.158 7.6294E-06 0 0 0 4.9073E-05 1 50835 67.415 55.894 1 NaN NaN 0 7963500 0 7963500 27590 1528 10403 10690 43200 43200 PAIAEYIVK 9 1 0 Unmodified _PAIAEYIVK_ 0 0 0 Q9H5I1;C9IYH9;C9JMB4 Q9H5I1 Q9H5I1 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 502.2952 2 502.294768 1002.57498 86960.13 0.22858 0.00011481 0.6476 0.00032529 0.87618 0.0004401 502.295263406211 506.301828600296 87.127 0.72568 87.127 86.85 87.576 0 133 41 4 0 0 0 0.023689 1 47073 48.561 44.815 1 1.218 0.95459 0 2070700 960320 1110400 27591 2036 10404 10691 43201 43201 PAISNILNR 9 0 1 Unmodified _PAISNILNR_ 0 0 0 Q8ND82;Q9UJJ2;H0YN90;A8K124;B4DHL1;A0A024R5W1;Q6N043;H0YLA6;H0YL38 Q8ND82;A8K124 Q8ND82 ZNF280C;ZNF280D;SUHW4 Zinc finger protein 280C;Zinc finger protein 280D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.7985 2 499.293091 996.571629 86529.64 0.20911 0.00010441 0.16958 8.467E-05 0.37869 0.00018908 499.293091128964 504.297166089393 68.805 0.85582 68.805 68.428 69.284 -7.6294E-06 228 75 4 0 0 0 0.015433 1 39714 54.776 42.729 1 0.98558 0.98413 0 16612000 8390000 8221900 27592 1924;189 10405 10692 43202 43202 PAISNILNR 9 0 1 Unmodified _PAISNILNR_ 0 0 0 Q8ND82;Q9UJJ2;H0YN90;A8K124;B4DHL1;A0A024R5W1;Q6N043;H0YLA6;H0YL38 Q8ND82;A8K124 Q8ND82 ZNF280C;ZNF280D;SUHW4 Zinc finger protein 280C;Zinc finger protein 280D MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 504.2974 2 499.293091 996.571629 85027.13 0.27267 0.00013614 -0.34114 -0.00017033 -0.068468 -3.4186E-05 499.293177659528 504.297063952587 78.641 0.93098 78.641 78.254 79.185 0 209 58 6 0 0 0 0.0047844 1 42137 68.383 46.532 1 1.765 1.4793 0 4065200 1363600 2701700 27593 1924;189 10405 10692 43203 43203 PAISNILNR 9 0 1 Unmodified _PAISNILNR_ 0 0 0 Q8ND82;Q9UJJ2;H0YN90;A8K124;B4DHL1;A0A024R5W1;Q6N043;H0YLA6;H0YL38 Q8ND82;A8K124 Q8ND82 ZNF280C;ZNF280D;SUHW4 Zinc finger protein 280C;Zinc finger protein 280D ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.2971 2 499.293091 996.571629 NaN NaN NaN 0.039633 1.9788E-05 NaN NaN NaN NaN 78.8 0.80013 78.8 78.46 79.26 0 0 0 0 0.0090541 1 41415 67.464 39.939 1 NaN NaN 0 1985500 0 1985500 27594 1924;189 10405 10692 43204 43204 PALPAGTEDTAK 12 1 0 Unmodified _PALPAGTEDTAK_ 0 0 0 Q5T0I0;B7Z4U6;B7Z992;A0A0A0MS51;B7Z9A0;B7Z6N2;A0A0A0MT01;CON__Q3SX14;P06396;B7Z2X4;B3KS49 Q5T0I0 Q5T0I0 GSN Gelsolin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.8032 2 585.803685 1169.59282 NaN NaN NaN -1.0747 -0.00062955 NaN NaN NaN NaN 32.207 0.45336 32.207 31.957 32.41 0 0 0 0 0.013122 1 15969 53.756 21.436 1 NaN NaN 0 13107000 13107000 0 + 27595 474 10406 10693 43205 43205 PALPAGTEDTAK 12 1 0 Unmodified _PALPAGTEDTAK_ 0 0 0 Q5T0I0;B7Z4U6;B7Z992;A0A0A0MS51;B7Z9A0;B7Z6N2;A0A0A0MT01;CON__Q3SX14;P06396;B7Z2X4;B3KS49 Q5T0I0 Q5T0I0 GSN Gelsolin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.8079 2 585.803685 1169.59282 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.7 1 31.7 31.2 32.2 1.9073E-06 0 0 0 0.0066799 1 15724 61.65 22.628 1 + 27596 474 10406 10693 43206 43206 PALPGADGTPFGCPPGR 17 0 1 Unmodified _PALPGADGTPFGCPPGR_ 0 0 0 Q6SPF0;E9PIW9;F8WDT5 Q6SPF0 Q6SPF0 SAMD1 Atherin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.4126 2 833.903939 1665.79333 NaN NaN NaN -0.22676 -0.0001891 NaN NaN NaN NaN 85.598 0.39967 85.598 85.358 85.757 0 0 0 0 0.00044749 1 52762 65.395 50.423 1 NaN NaN 0 8491000 0 8491000 27597 1861 10407 10694 43207 43207 PALPGADGTPFGCPPGR 17 0 1 Unmodified _PALPGADGTPFGCPPGR_ 0 0 0 Q6SPF0;E9PIW9;F8WDT5 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 838.9089 2 833.903939 1665.79333 66387.41 0.5809 0.00048441 -0.76945 -0.00064165 -0.18855 -0.00015723 833.903749578256 838.907741923953 98.585 0.43153 98.585 98.373 98.805 0 95 28 5 0 0 0 0.011461 1 55569 30.828 30.828 1 1.1396 0.98702 0 2559600 1155100 1404500 27598 1861 10407 10694 43208 43208 PALPGADGTPFGCPPGR 17 0 1 Unmodified _PALPGADGTPFGCPPGR_ 0 0 0 Q6SPF0;E9PIW9;F8WDT5 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.9081 2 833.903939 1665.79333 69615.58 0.75855 0.00063255 -0.63174 -0.00052681 0.1268 0.00010574 834.40541306464 838.907796245906 98.464 0.46179 98.464 98.229 98.691 0 112 28 6 0 0 0 0.00094691 2 54692 44.299 38.196 1 1.2774 1.1539 0 2211900 920300 1291600 27599 1861 10407 10694 43209;43210 43210 PANFLDLGGGVK 12 1 0 Unmodified _PANFLDLGGGVK_ 0 0 0 A0A024R325;Q96I99;Q3ZCW5;E9PDQ8;B7Z2D5 A0A024R325 A0A024R325 SUCLG2 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.327 2 594.324588 1186.63462 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.97 1 92.97 92.47 93.47 0 0 0 0 0.040233 1 56355 62.869 47.661 1 27600 126 10408 10695 43211 43211 PANIFLGPR 9 0 1 Unmodified _PANIFLGPR_ 0 0 0 A6NHV6;Q0IJ49;B4DZM6;Q99640;I3L136 A6NHV6 A6NHV6 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.789 2 492.784902 983.55525 85015.53 0.33688 0.00016601 -0.020903 -1.0301E-05 0.31598 0.00015571 492.784900193997 497.788888201093 99.017 0.95953 99.017 98.642 99.602 0 329 55 10 0 0 0 0.030795 1 55730 45.718 25.198 1 0.82761 0.71339 0 68894000 39338000 29556000 27601 685 10409 10696 43212 43212 PANIFLGPR 9 0 1 Unmodified _PANIFLGPR_ 0 0 0 A6NHV6;Q0IJ49;B4DZM6;Q99640;I3L136 A6NHV6 A6NHV6 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.7892 2 492.784902 983.55525 84047.89 0.24051 0.00011852 0.16024 7.8966E-05 0.40076 0.00019749 492.784926469176 497.789028638059 98.898 0.93352 98.898 98.513 99.446 7.6294E-06 302 55 8 0 0 0 0.030795 1 54830 45.718 26.987 1 0.80045 0.69849 0 66007000 35724000 30283000 27602 685 10409 10696 43213 43213 PANSVFTTK 9 1 0 Unmodified _PANSVFTTK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4;Q05DV5;H7C5K1 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.7589 2 482.758549 963.502546 87832.18 0.25766 0.00012439 0.62873 0.00030352 0.88639 0.00042791 482.758698198511 486.765952426003 31.029 0.18827 31.029 30.919 31.107 0 74 17 6 0 0 0 9.8198E-08 3 15252 139.74 110.59 1 1.1702 1.2574 0 39128000 19068000 20059000 27603 1873 10410 10697 43214;43215;43216 43215 PANSVFTTK 9 1 0 Unmodified _PANSVFTTK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4;Q05DV5;H7C5K1 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7659 2 482.758549 963.502546 87077.87 0.0029417 1.4201E-06 0.39967 0.00019294 0.40261 0.00019436 482.75867953221 486.765835032799 30.416 0.18348 30.416 30.315 30.499 -1.9073E-06 59 14 5 0 0 0 5.5067E-08 2 14927 144.5 114.31 1 1.2927 1.3235 0 31775000 13781000 17994000 27604 1873 10410 10697 43217;43218 43218 PAPIYILDEVDAALDLSHTQNIGQMLR 27 0 1 Oxidation (M) _PAPIYILDEVDAALDLSHTQNIGQM(ox)LR_ PAPIYILDEVDAALDLSHTQNIGQM(1)LR PAPIYILDEVDAALDLSHTQNIGQM(101.3)LR 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1007.8384 3 1003.84985 3008.52772 58498.2 0.21821 0.00021905 -0.27679 -0.00027785 -0.058573 -5.8799E-05 1004.51735809988 1007.52057593796 133.42 0.39758 133.42 133.3 133.7 0 31 8 7 0 0 0 1.5013E-27 2 89577 101.3 101.3 1 1.5944 1.8467 0 285600000 139050000 146550000 27605 69 10411 10698 43219;43220 43219 41 PAPNAAPVDPTLR 13 0 1 Unmodified _PAPNAAPVDPTLR_ 0 0 0 Q6P1J9;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8643 2 659.859326 1317.7041 NaN NaN NaN 0.10267 6.7745E-05 NaN NaN NaN NaN 56.356 0.5182 56.356 56.007 56.526 -3.8147E-06 0 0 0 0.00077554 1 32427 79.659 64.992 1 NaN NaN 0 8346100 0 8346100 27606 1851 10412 10699 43221 43221 PAPPKPEPK 9 2 0 Unmodified _PAPPKPEPK_ 0 0 1 P05204;A0A087WZE9;Q15651 P05204 P05204 HMGN2;HMGN3 Non-histone chromosomal protein HMG-17;High mobility group nucleosome-binding domain-containing protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 320.8553 3 320.855282 959.544017 NaN NaN NaN 0.074841 2.4013E-05 NaN NaN NaN NaN 15.689 1.0894 15.689 15.541 16.63 9.5367E-07 0 0 0 0.014973 1 3224 52.937 25.935 1 NaN NaN 0 220680000 220680000 0 27607 1446 10413 10700 43222 43222 PAPPKPEPK 9 2 0 Unmodified _PAPPKPEPK_ 0 0 1 P05204;A0A087WZE9;Q15651 P05204 P05204 HMGN2;HMGN3 Non-histone chromosomal protein HMG-17;High mobility group nucleosome-binding domain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 320.8553 3 320.855282 959.544017 103852.5 -0.19236 -6.1719E-05 0.20166 6.4704E-05 0.0093039 2.9852E-06 320.855295457974 326.198161091172 15.266 0.39869 15.266 15.148 15.547 -9.5367E-07 58 16 6 0 0 0 0.018911 1 2948 34.387 28.283 1 0.71262 0.81504 0 16958000 9847100 7110800 27608 1446 10413 10700 43223 43223 PAPPKPEPK 9 2 0 Unmodified _PAPPKPEPK_ 0 0 1 P05204;A0A087WZE9;Q15651 P05204 P05204 HMGN2;HMGN3 Non-histone chromosomal protein HMG-17;High mobility group nucleosome-binding domain-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 320.8553 3 320.855282 959.544017 103400.2 -0.22751 -7.2997E-05 0.21216 6.8074E-05 -0.015344 -4.9232E-06 320.855422105526 326.198042603087 16.285 0.85988 16.285 15.967 16.826 0 200 64 8 0 0 0 0.017507 2 3086 43.442 35.728 1 0.27246 0.23177 0 31494000 24524000 6970300 27609 1446 10413 10700 43224;43225 43224 PAPPKPEPKPK 11 3 0 Unmodified _PAPPKPEPKPK_ 0 0 2 P05204 P05204 P05204 HMGN2 Non-histone chromosomal protein HMG-17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 395.9042 3 395.904524 1184.69174 92494.88 -0.33735 -0.00013356 0.29052 0.00011502 -0.046824 -1.8538E-05 395.904642693371 404.253299376134 15.457 0.20891 15.457 15.371 15.58 9.5367E-07 37 9 7 0 0 0 0.027388 1 2498 39.785 39.785 1 0.19903 0.19685 0 9346800 8258300 1088500 27610 1446 10414 10701 43226 43226 PAPPKPEPKPK 11 3 0 Unmodified _PAPPKPEPKPK_ 0 0 2 P05204 P05204 P05204 HMGN2 Non-histone chromosomal protein HMG-17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.8552 2 593.353148 1184.69174 78938.11 0.17544 0.0001041 0.53456 0.00031718 0.71 0.00042128 593.353278558893 605.374676643931 15.46 0.11786 15.46 15.389 15.507 0 29 5 8 0 0 0 0.058134 1 2507 64.654 64.654 1 0.28822 0.28506 0 2779400 2208500 570950 27611 1446 10414 10701 43227 43227 PAPPKPEPR 9 1 1 Unmodified _PAPPKPEPR_ 0 0 1 A0A024R046;O00479 A0A024R046 A0A024R046 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 330.1907 3 330.190665 987.550165 103395 0.2998 9.899E-05 -0.1718 -5.6727E-05 0.128 4.2263E-05 330.190630035525 336.198104372388 16.504 0.90356 16.504 16.322 17.225 0 170 33 9 0 0 0 2.9779E-06 2 3816 131.06 117.48 1 0.52476 0.63619 0 293440000 179000000 114440000 27612 36 10415 10702 43228;43229 43229 PAPPKPEPR 9 1 1 Unmodified _PAPPKPEPR_ 0 0 1 A0A024R046;O00479 A0A024R046 A0A024R046 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.7835 2 494.782359 987.550165 84712.88 0.53989 0.00026713 0.10079 4.9867E-05 0.64068 0.000317 494.782359901829 503.79358202089 16.504 0.64013 16.504 16.322 16.962 0 128 26 9 0 0 0 0.0041188 2 3831 92.439 72.803 1 0.50676 0.61295 0 204740000 125740000 79000000 27613 36 10415 10702 43230;43231 43231 PAPPKPEPR 9 1 1 Unmodified _PAPPKPEPR_ 0 0 1 A0A024R046;O00479 A0A024R046 A0A024R046 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 330.1905 3 330.190665 987.550165 102831.6 -0.1784 -5.8905E-05 0.062136 2.0517E-05 -0.11626 -3.8388E-05 330.190853425214 336.198158311903 16.486 0.70331 16.486 16.361 17.064 0 164 30 10 0 0 0 9.0888E-06 2 3599 118.5 104.92 1 0.49872 0.59054 0 213210000 141780000 71431000 27614 36 10415 10702 43232;43233 43232 PAPPKPEPR 9 1 1 Unmodified _PAPPKPEPR_ 0 0 1 A0A024R046;O00479 A0A024R046 A0A024R046 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7826 2 494.782359 987.550165 85051.01 -0.057044 -2.8225E-05 0.25658 0.00012695 0.19953 9.8726E-05 494.782476287279 503.793683315731 16.497 0.5267 16.497 16.361 16.888 1.9073E-06 125 23 9 0 0 0 0.0062801 2 3611 102.51 76.62 1 0.45071 0.5309 0 92652000 63535000 29117000 27615 36 10415 10702 43234;43235 43234 PAPPKPEPR 9 1 1 Unmodified _PAPPKPEPR_ 0 0 1 A0A024R046;O00479 A0A024R046 A0A024R046 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 330.1905 3 330.190665 987.550165 102403.6 -0.31595 -0.00010433 0.15624 5.1587E-05 -0.15972 -5.2738E-05 330.190829951173 336.198180218858 17.187 0.62984 17.187 17.036 17.666 0 131 33 9 0 0 0 0.0057064 1 3639 57.55 49.618 1 0.2495 0.21986 0 37367000 30207000 7159800 27616 36 10415 10702 43236 43236 PAPPKPEPR 9 1 1 Unmodified _PAPPKPEPR_ 0 0 1 A0A024R046;O00479 A0A024R046 A0A024R046 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.7822 2 494.782359 987.550165 84940.64 -0.0085532 -4.232E-06 0.31922 0.00015794 0.31067 0.00015371 494.782456153009 503.793716206578 17.173 0.43571 17.173 17.052 17.488 0 91 21 9 0 0 0 0.055416 1 3640 66.621 53.042 1 0.24552 0.21165 0 12387000 9639600 2747100 27617 36 10415 10702 43237 43237 PAPPKPEPR 9 1 1 Unmodified _PAPPKPEPR_ 0 0 1 A0A024R046;O00479 A0A024R046 A0A024R046 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 330.1905 3 330.190665 987.550165 103064.1 -0.49928 -0.00016486 -0.035867 -1.1843E-05 -0.53515 -0.0001767 330.190676317098 336.198209524624 17.209 0.47221 17.209 17.08 17.552 0 166 35 9 0 0 0 0.015968 2 3302 44.203 34.809 1 0.27427 0.23298 0 25824000 20582000 5242500 27618 36 10415 10702 43238;43239 43238 PAPPKPEPR 9 1 1 Unmodified _PAPPKPEPR_ 0 0 1 A0A024R046;O00479 A0A024R046 A0A024R046 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.7821 2 494.782359 987.550165 83491.1 -0.22147 -0.00010958 0.073472 3.6353E-05 -0.148 -7.3228E-05 494.782339849734 503.793569272699 17.218 0.46059 17.218 17.08 17.54 0 145 34 8 0 0 0 0.048886 1 3311 67.993 58.006 1 0.23084 0.19527 0 10907000 8750200 2157100 27619 36 10415 10702 43240 43240 PAPPPTIEEK 10 1 0 Unmodified _PAPPPTIEEK_ 0 0 0 P18583;Q6ZRV7;J3QSZ5;B3KRA1;H7C1M2;H7C2G8 P18583 P18583 SON Protein SON MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.7999 2 539.792589 1077.57063 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.706 1 30.706 30.206 31.206 0 0 0 0 0.039494 1 15093 47.198 15.263 1 27620 1499 10416 10703 43241 43241 PAPPQTEQVESK 12 1 0 Unmodified _PAPPQTEQVESK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8333 2 655.832974 1309.6514 74596.84 1.0026 0.00065752 -0.34491 -0.0002262 0.65766 0.00043132 655.832782946013 659.839854465282 22.339 0.46154 22.339 22.141 22.603 1.9073E-06 158 28 8 0 0 0 8.6168E-13 2 8388 132.25 101.69 1 0.92526 1.0463 0 103880000 51705000 52174000 27621 1752 10417 10704 43242;43243 43243 PAPPQTEQVESK 12 1 0 Unmodified _PAPPQTEQVESK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.8334 2 655.832974 1309.6514 73959.8 0.45666 0.00029949 -0.15653 -0.00010266 0.30013 0.00019683 655.832825710032 659.839901386364 22.237 0.52197 22.237 22.041 22.563 1.9073E-06 103 23 7 0 0 0 2.1832E-13 2 8227 150.04 113.62 1 0.90969 1.024 0 121680000 63159000 58526000 27622 1752 10417 10704 43244;43245 43245 PAPPQTEQVESK 12 1 0 Unmodified _PAPPQTEQVESK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.8337 2 655.832974 1309.6514 75256.3 0.67704 0.00044402 -0.20762 -0.00013617 0.46941 0.00030786 655.832840042562 659.839897123402 24.825 0.56966 24.825 24.553 25.123 0 158 30 7 0 0 0 2.1858E-05 2 8831 102.53 63.226 1 1.2173 0.94367 0 13675000 6312100 7362500 27623 1752 10417 10704 43246;43247 43247 PAPPQTEQVESK 12 1 0 Unmodified _PAPPQTEQVESK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.8334 2 655.832974 1309.6514 71539.96 0.60974 0.00039989 -0.77913 -0.00051098 -0.16939 -0.00011109 655.83286240392 659.839791671906 24.924 0.95487 24.924 24.508 25.463 0 182 49 8 0 0 0 0.0029259 2 8371 57.348 29.335 1 1.1968 0.9608 0 14225000 6558100 7667200 27624 1752 10417 10704 43248;43249 43249 PAPYIIFGPPGTGK 14 1 0 Unmodified _PAPYIIFGPPGTGK_ 0 0 0 B7Z700;Q5JR04;Q9HCE1 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.8969 2 707.890095 1413.76564 NaN NaN NaN -1.954 -0.0013832 NaN NaN NaN NaN 103.68 0.10034 103.68 103.64 103.74 0 0 0 0 0.0067802 1 65618 54.259 39.58 1 NaN NaN 0 3269400 0 3269400 27625 1102 10418 10705 43250 43250 PAQNYDDNFNVNGPGEGVK 19 1 0 Unmodified _PAQNYDDNFNVNGPGEGVK_ 0 0 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1018.4625 2 1017.96123 2033.9079 61751.91 0.35883 0.00036527 0.24298 0.00024735 0.60181 0.00061262 1017.96097943517 1022.47112863151 63.231 0.23047 63.231 63.122 63.353 0 50 17 6 0 0 0 3.3102E-05 2 37147 54.524 51.614 1 0.60066 0.5963 0 6086300 3637800 2448500 27626 1806 10419 10706 43251;43252 43252 PAQPALSR 8 0 1 Unmodified _PAQPALSR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 425.2439 2 420.240327 838.466101 NaN NaN NaN -0.96063 -0.0004037 NaN NaN NaN NaN 21.247 0.4075 21.247 21.094 21.501 0 0 0 0 0.0077322 1 7600 81.784 14.752 1 NaN NaN 0 11495000 0 11495000 27627 2023 10420 10707 43253 43253 PAQPALSREELEALFLPYDLK 21 1 1 Unmodified _PAQPALSREELEALFLPYDLK_ 0 0 1 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.1006 3 800.765164 2399.27366 67655.26 1.2255 0.00098135 -0.080562 -6.4511E-05 1.145 0.00091684 801.099411433977 807.106874453344 126.67 1.6393 126.67 126.04 127.68 7.6294E-06 572 111 8 0 0 0 1.1881E-05 4 82607 46.702 46.702 1 0.9464 1.0443 0 18320000 8446100 9874300 27628 2023 10421 10708 43254;43255;43256;43257 43255 PAQPALSREELEALFLPYDLK 21 1 1 Unmodified _PAQPALSREELEALFLPYDLK_ 0 0 1 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.1002 3 800.765164 2399.27366 67712.94 1.0136 0.00081169 0.16806 0.00013458 1.1817 0.00094626 801.099462075327 806.772809803891 126.08 1.6823 126.08 125.17 126.86 0 633 107 9 0 0 0 1.091E-08 4 83912 77.391 77.391 1 0.92856 1.0859 0 51023000 26963000 24061000 27629 2023 10421 10708 43258;43259;43260;43261 43259 PAQPALSREELEALFLPYDLK 21 1 1 Unmodified _PAQPALSREELEALFLPYDLK_ 0 0 1 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 801.1005 3 800.765164 2399.27366 66868.98 0.83667 0.00066998 0.29537 0.00023652 1.132 0.0009065 801.099673885918 807.107091832801 134.54 0.19019 134.54 134.43 134.62 0 54 6 13 0 0 0 3.6542E-08 2 82168 69.922 69.922 1 1.5559 1.4111 0 158080000 61274000 96809000 27630 2023 10421 10708 43262;43263 43262 PAQPALSREELEALFLPYDLK 21 1 1 Unmodified _PAQPALSREELEALFLPYDLK_ 0 0 1 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 801.0999 3 800.765164 2399.27366 67089.15 0.61612 0.00049336 0.20866 0.00016708 0.82477 0.00066045 801.099573480882 807.107149013238 134.47 0.26543 134.47 134.36 134.63 0 62 8 12 0 0 0 6.1632E-07 1 81250 50.539 50.539 1 1.559 1.336 0 159210000 63179000 96034000 27631 2023 10421 10708 43264 43264 PASANISLYER 11 0 1 Unmodified _PASANISLYER_ 0 0 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.8218 2 610.817127 1219.6197 81805.45 0.67828 0.0004143 0.083549 5.1033E-05 0.76183 0.00046534 610.817086388196 615.821385190265 55.932 0.41365 55.932 55.75 56.164 3.8147E-06 91 30 4 0 0 0 1.7293E-05 2 31460 105.98 27.877 1 1.248 1.3075 0 12483000 4212600 8270500 27632 1400 10422 10709 43265;43266 43266 PASANISLYER 11 0 1 Unmodified _PASANISLYER_ 0 0 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.8211 2 610.817127 1219.6197 78659.38 0.37438 0.00022868 -0.42587 -0.00026013 -0.051495 -3.1454E-05 610.816782824387 615.821195468441 55 0.49284 55 54.716 55.209 3.8147E-06 110 40 4 0 0 0 0.00042899 1 31475 79.201 2.9736 1 1.0975 1.0881 0 15785000 6693800 9091100 27633 1400 10422 10709 43267 43267 PASANISLYER 11 0 1 Unmodified _PASANISLYER_ 0 0 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.8209 2 610.817127 1219.6197 80162.98 0.50009 0.00030546 -0.34458 -0.00021048 0.15551 9.4986E-05 610.816425351532 615.821183306705 65.168 0.46769 65.168 64.929 65.397 0 97 36 5 0 0 0 0.035574 1 33701 36.684 31.143 1 1.6331 1.4148 0 1991500 767030 1224500 27634 1400 10422 10709 43268 43268 PASGPIRPIVR 11 0 2 Unmodified _PASGPIRPIVR_ 0 0 1 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 388.2399 3 388.240018 1161.69823 93952.54 0.30881 0.00011989 -0.16029 -6.2233E-05 0.14851 5.7658E-05 388.240132901431 394.912229462725 36.876 1.447 36.876 36.669 38.116 0 652 126 10 0 0 0 1.2724E-05 1 18668 101.97 90.108 1 0.93391 1.0247 0 982850000 455420000 527430000 27635 733 10423 10710 43269 43269 PASGPIRPIVR 11 0 2 Unmodified _PASGPIRPIVR_ 0 0 1 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 388.2395 3 388.240018 1161.69823 94399.19 1.0145 0.00039386 -0.43304 -0.00016812 0.58143 0.00022573 388.239999928543 394.912129326854 35.626 1.3104 35.626 35.15 36.461 0 609 114 10 0 0 0 0.010856 1 18007 42.21 30.747 1 0.8511 1.0505 0 908610000 504700000 403910000 27636 733 10423 10710 43270 43270 PASISEEELLNLINK 15 1 0 Unmodified _PASISEEELLNLINK_ 0 0 0 B2R7W0;P13995 B2R7W0 B2R7W0 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 839.4627 2 835.453985 1668.89342 68279.69 0.93599 0.00078198 1.2819 0.001071 2.2179 0.0018529 835.455117765184 839.461729050067 119.52 0.44613 119.52 119.29 119.74 0 95 29 5 0 0 0 1.5912E-70 2 76906 203.11 203.11 1 3.909 4.0074 0 10598000 2086200 8511500 27637 853 10424 10711 43271;43272 43271 PASISEEELLNLINK 15 1 0 Unmodified _PASISEEELLNLINK_ 0 0 0 B2R7W0;P13995 B2R7W0 B2R7W0 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 839.9644 2 835.453985 1668.89342 69118.61 1.1758 0.00098229 0.6268 0.00052366 1.8026 0.001506 836.457597176049 839.962698846307 132.13 0.57457 132.13 131.9 132.48 0 111 25 8 0 0 0 0.046599 1 79390 23.749 23.749 1 1.0708 0.83542 0 3637400 1808200 1829200 27638 853 10424 10711 43273 43273 PATAIGVIGNFTDAER 16 0 1 Unmodified _PATAIGVIGNFTDAER_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;M1V490;M1VPF9;M1V481;M1VPF7;M1VRN0;M1VKI9;M1VE89 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020630)_K15;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-RET(NM_020975)_K16;R12 Kinesin-like protein;Kinesin-1 heavy chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.4279 2 816.423019 1630.83148 NaN NaN NaN -0.24771 -0.00020224 NaN NaN NaN NaN 102.2 0.47858 102.2 101.99 102.46 0 0 0 0 3.9323E-13 2 64449 116.24 101.27 1 NaN NaN 0 11855000 0 11855000 27639 1186 10425 10712 43274;43275 43274 PATFTVNTK 9 1 0 Unmodified _PATFTVNTK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5F3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.7734 2 489.766374 977.518196 89268.1 0.35135 0.00017208 0.60698 0.00029728 0.95832 0.00046936 489.76680363805 493.773556187426 36.996 0.54051 36.996 36.785 37.325 0 120 48 4 0 0 0 0.00249 1 18787 74.2 63.786 1 1.4403 1.4696 0 14259000 6194500 8064200 27640 1504 10426 10713 43276 43276 PATLLWLIQK 10 1 0 Unmodified _PATLLWLIQK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8739 2 591.865892 1181.71723 81871.69 1.1173 0.0006613 0.19686 0.00011651 1.3142 0.00077781 591.865785123819 595.872841182436 119.08 0.44164 119.08 118.91 119.36 0 85 28 5 0 0 0 1.848E-08 2 76549 122.19 110.14 1 1.3051 1.318 0 4811600 2234000 2577500 27641 1412 10427 10714 43277;43278 43277 PATLLWLIQK 10 1 0 Unmodified _PATLLWLIQK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8734 2 591.865892 1181.71723 82569.49 0.59789 0.00035387 0.038592 2.2841E-05 0.63648 0.00037671 591.865902642453 595.872831258714 118.52 0.45971 118.52 118.26 118.72 7.6294E-06 92 27 5 0 0 0 1.3272E-06 2 77877 111.74 111.74 1 1.3376 1.334 0 5689900 2708200 2981700 27642 1412 10427 10714 43279;43280 43279 PAVCYQAITK 10 1 0 Unmodified _PAVCYQAITK_ 0 0 0 D3DUE7;Q49A26;K7EPU6 D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.8005 2 575.799891 1149.58523 77697.34 0.50448 0.00029048 0.67064 0.00038616 1.1751 0.00067664 575.801179670077 579.807035320893 55.789 1.0265 55.789 55.381 56.408 3.8147E-06 235 64 5 0 0 0 0.061197 1 28026 34.803 30.88 1 1.9581 1.5678 0 8577300 2762500 5814700 27643 1194 10428 10715 43281 43281 PAVFIPVNR 9 0 1 Unmodified _PAVFIPVNR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.8006 2 506.800552 1011.58655 NaN NaN NaN 0.3813 0.00019324 NaN NaN NaN NaN 76.369 0.51163 76.369 76.098 76.609 0 0 0 0 0.0067214 1 46177 71.715 60.646 1 NaN NaN 0 3681100 3681100 0 27644 1897 10429 10716 43282 43282 PAVFIPVNR 9 0 1 Unmodified _PAVFIPVNR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.8058 2 506.800552 1011.58655 NaN NaN NaN 0.26886 0.00013626 NaN NaN NaN NaN 87.821 0.48899 87.821 87.589 88.078 -7.6294E-06 0 0 0 0.007112 2 48382 70.912 42.4 1 NaN NaN 0 779020 0 779020 27645 1897 10429 10716 43283;43284 43284 PAVFIPVNR 9 0 1 Unmodified _PAVFIPVNR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.8063 2 506.800552 1011.58655 87462.53 0.34663 0.00017567 0.39627 0.00020083 0.7429 0.0003765 506.800495326427 511.805055198189 87.777 0.57973 87.777 87.541 88.121 -7.6294E-06 96 35 4 0 0 0 0.004769 1 47507 68.422 68.422 1 0.9018 0.78711 0 1282000 518350 763600 27646 1897 10429 10716 43285 43285 PAVPETAGIK 10 1 0 Unmodified _PAVPETAGIK_ 0 0 0 B4DQG8;Q9NPF5 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.7902 2 491.782025 981.549496 NaN NaN NaN -0.67958 -0.00033421 NaN NaN NaN NaN 41.347 0.29132 41.347 41.21 41.501 0 0 0 0 0.0045454 1 21770 72.23 53.454 1 NaN NaN 0 10023000 0 10023000 27647 1024 10430 10717 43286 43286 PAVTQLLWER 10 0 1 Unmodified _PAVTQLLWER_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.845 2 606.840405 1211.66626 77326.28 0.73817 0.00044795 0.19271 0.00011694 0.93087 0.00056489 606.840533880378 611.844578615463 98.841 0.95022 98.841 98.414 99.364 -7.6294E-06 391 78 7 0 0 0 1.2004E-16 1 60530 160.36 138.66 1 0.72169 0.76414 0 41268000 24400000 16868000 27648 908 10431 10718 43287 43287 PAVTQLLWER 10 0 1 Unmodified _PAVTQLLWER_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.8444 2 606.840405 1211.66626 77859.88 0.56358 0.00034201 0.29374 0.00017825 0.85732 0.00052026 606.840578184787 611.844634964839 98.021 1.0597 98.021 97.495 98.555 -7.6294E-06 406 89 7 0 0 0 4.3259E-16 1 61342 152.97 135.46 1 0.74321 0.85423 0 77045000 44208000 32837000 27649 908 10431 10718 43288 43288 PAVTQLLWER 10 0 1 Unmodified _PAVTQLLWER_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.8455 2 606.840405 1211.66626 NaN NaN NaN -0.3151 -0.00019121 NaN NaN NaN NaN 111.58 0.47781 111.58 111.35 111.83 7.6294E-06 0 0 0 0.0025671 1 64713 79.974 58.467 1 NaN NaN 0 3496400 0 3496400 27650 908 10431 10718 43289 43289 PAVTQLLWER 10 0 1 Unmodified _PAVTQLLWER_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.8447 2 606.840405 1211.66626 80447.47 0.53434 0.00032426 0.20092 0.00012193 0.73526 0.00044619 606.840981826319 611.84423826014 111.38 0.57809 111.38 111.15 111.73 0 102 31 7 0 0 0 0.00081648 1 63626 80.763 71.249 1 1.7116 1.5134 0 3922200 1115300 2806900 27651 908 10431 10718 43290 43290 PAVTTLVVK 9 1 0 Unmodified _PAVTTLVVK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2971 2 464.29731 926.580068 90004.15 0.22403 0.00010402 -0.23661 -0.00010986 -0.012574 -5.8379E-06 464.297007122154 468.304292376201 61.819 0.44537 61.819 61.602 62.047 -3.8147E-06 129 35 6 0 0 0 0.0018009 2 35422 80.684 47.041 1 0.8148 0.83473 0 17654000 10055000 7598400 27652 680 10432 10719 43291;43292 43292 PAVTTLVVK 9 1 0 Unmodified _PAVTTLVVK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2968 2 464.29731 926.580068 89140.54 0.22642 0.00010513 -0.93307 -0.00043322 -0.70665 -0.0003281 464.2964500732 468.304178573076 60.416 0.32757 60.416 60.277 60.605 3.8147E-06 72 19 5 0 0 0 0.0018844 1 35330 79.596 55.576 1 0.68719 0.72639 0 20127000 10368000 9758000 27653 680 10432 10719 43293 43293 PDPSGECNPDLR 12 0 1 Unmodified _PDPSGECNPDLR_ 0 0 0 Q09028;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP01 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.7961 2 678.796066 1355.57758 73141.59 0.86497 0.00058714 -0.14117 -9.5825E-05 0.7238 0.00049131 678.796018484022 683.799507211027 27.236 0.23415 27.236 27.083 27.317 0 33 10 5 0 0 0 0.00022281 1 12493 88.596 80.671 1 0.91736 0.94049 0 6539400 3192500 3346900 27654 1771;1695 10433 10720 43294 43294 PDPSGECNPDLR 12 0 1 Unmodified _PDPSGECNPDLR_ 0 0 0 Q09028;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP01 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.8002 2 678.796066 1355.57758 73435.63 1.0544 0.00071574 -0.41081 -0.00027886 0.64361 0.00043688 678.795784570676 683.799473602206 26.804 0.27275 26.804 26.674 26.946 1.9073E-06 34 12 4 0 0 0 0.00018807 2 12213 79.693 78.433 1 1.0972 1.0912 0 8849300 3927400 4921800 27655 1771;1695 10433 10720 43295;43296 43296 PEFLEDPSVLTK 12 1 0 Unmodified _PEFLEDPSVLTK_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.3461 2 687.8612 1373.70785 73562.37 0.67754 0.00046605 0.1619 0.00011136 0.83944 0.00057742 687.861308210139 691.868569301481 109.25 0.74292 109.25 108.9 109.64 0 117 35 5 0 0 0 0.050203 1 63019 52.247 52.247 1 0.88001 0.68392 0 15232000 8810200 6422200 27656 334;1562 10434 10721 43297 43297 PENLLLGLK 9 1 0 Unmodified _PENLLLGLK_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.8177 2 498.808042 995.601532 NaN NaN NaN 2.0259 0.0010105 NaN NaN NaN NaN 91.719 0.27089 91.719 91.553 91.824 0 0 0 0 0.052145 1 56852 46.335 30.002 1 NaN NaN 0 5474700 0 5474700 27657 881;1967 10435 10722 43298 43298 PFADTLDQVNISK 13 1 0 Unmodified _PFADTLDQVNISK_ 0 0 0 B2RWN5;B4E263;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.3824 2 724.375006 1446.73546 71886.96 0.86941 0.00062978 0.66437 0.00048125 1.5338 0.001111 724.374573371227 728.381690118868 85.035 0.77197 85.035 84.725 85.497 0 332 62 7 0 0 0 1.1619E-18 2 51038 140.57 140.57 1 0.91374 1.0308 0 78037000 41576000 36461000 27658 897 10436 10723 43299;43300 43299 PFADTLDQVNISK 13 1 0 Unmodified _PFADTLDQVNISK_ 0 0 0 B2RWN5;B4E263;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.3818 2 724.375006 1446.73546 70874.77 0.71881 0.00052069 0.4292 0.0003109 1.148 0.00083159 724.877286310315 728.381710410672 84.169 0.71883 84.169 83.912 84.631 0 272 58 6 0 0 0 1.6717E-05 2 51651 99.5 99.5 1 0.90605 1.0124 0 93215000 47691000 45524000 27659 897 10436 10723 43301;43302 43301 PFFAAISDEK 10 1 0 Unmodified _PFFAAISDEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.7927 2 562.784764 1123.55498 81290.05 0.81329 0.0004577 -0.1707 -9.6067E-05 0.64259 0.00036164 562.784544047327 566.791592935084 79.694 0.8095 79.694 79.314 80.123 0 320 69 6 0 0 0 5.3188E-06 2 47225 108.74 90.757 1 0.9312 1.0033 0 41067000 20788000 20278000 27660 897 10437 10724 43303;43304 43304 PFFAAISDEK 10 1 0 Unmodified _PFFAAISDEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.7852 2 562.784764 1123.55498 81252.27 0.45937 0.00025853 -0.14771 -8.313E-05 0.31166 0.0001754 562.784503741884 566.791689972534 78.58 0.87483 78.58 78.146 79.021 0 347 76 7 0 0 0 2.3914E-08 2 47540 121.09 106.42 1 0.96651 1.089 0 68590000 33337000 35253000 27661 897 10437 10724 43305;43306 43306 PFFAAISDEK 10 1 0 Unmodified _PFFAAISDEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.7846 2 562.784764 1123.55498 80424.45 0.6876 0.00038697 0.14784 8.3201E-05 0.83544 0.00047017 562.78470320552 566.791817571049 90.55 1.256 90.55 90.2 91.456 0 353 79 7 0 0 0 0.0011014 2 50105 76.17 76.17 1 1.2265 0.98169 0 8657800 3879400 4778400 27662 897 10437 10724 43307;43308 43308 PFFAAISDEK 10 1 0 Unmodified _PFFAAISDEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.7923 2 562.784764 1123.55498 80945.27 0.4314 0.00024278 0.052898 2.977E-05 0.48429 0.00027255 562.784630766358 566.791777859969 90.481 1.1225 90.481 90.16 91.283 0 313 69 7 0 0 0 0.00074153 2 49222 81.972 75.869 1 1.2653 1.0342 0 8224900 3706200 4518700 27663 897 10437 10724 43309;43310 43309 PFGNSISR 8 0 1 Unmodified _PFGNSISR_ 0 0 0 Q14739;A0A024R3R5;C9JXK0 Q14739 Q14739 LBR Lamin-B receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.2339 2 439.229959 876.445365 88952.91 0.035164 1.5445E-05 -0.19274 -8.4658E-05 -0.15758 -6.9213E-05 439.229140597842 444.233877122009 27.771 0.40063 27.771 27.625 28.026 0 81 26 7 0 0 0 0.013465 1 12917 65.252 47.485 1 1.4509 1.504 0 22832000 10050000 12782000 27664 1743 10438 10725 43311 43311 PFGSEEQLLPVEK 13 1 0 Unmodified _PFGSEEQLLPVEK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.8873 2 736.885207 1471.75586 NaN NaN NaN 0.1185 8.7323E-05 NaN NaN NaN NaN 90.088 0.54092 90.088 89.916 90.457 0 0 0 0 0.0039328 1 54344 63.32 43.33 1 NaN NaN 0 11116000 11116000 0 27665 1411 10439 10726 43312 43312 PFGSEEQLLPVEK 13 1 0 Unmodified _PFGSEEQLLPVEK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.8927 2 736.885207 1471.75586 72107.7 0.62968 0.000464 0.45146 0.00033267 1.0811 0.00079668 736.88448894189 740.892797303542 89.198 0.81265 89.198 88.83 89.642 0 264 66 7 0 0 0 3.3092E-19 2 55043 147.72 131.83 1 1.1714 1.3019 0 50514000 26901000 23613000 27666 1411 10439 10726 43313;43314 43314 PFGSEEQLLPVEK 13 1 0 Unmodified _PFGSEEQLLPVEK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.8861 2 736.885207 1471.75586 NaN NaN NaN 0.090102 6.6395E-05 NaN NaN NaN NaN 103.01 0.43781 103.01 102.83 103.27 0 0 0 0 0.0020727 1 58489 71.806 60.977 1 NaN NaN 0 3214900 3214900 0 27667 1411 10439 10726 43315 43315 PFGSEEQLLPVEK 13 1 0 Unmodified _PFGSEEQLLPVEK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 736.8854 2 736.885207 1471.75586 NaN NaN NaN -0.10759 -7.9285E-05 NaN NaN NaN NaN 102.83 0.41446 102.83 102.63 103.04 7.6294E-06 0 0 0 0.041457 1 57522 41.164 33.238 1 NaN NaN 0 2086900 2086900 0 27668 1411 10439 10726 43316 43316 PFGVALLFGGVDEK 14 1 0 Unmodified _PFGVALLFGGVDEK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.439 2 724.892835 1447.77112 70903.98 0.8923 0.00064683 -0.016106 -1.1675E-05 0.8762 0.00063515 724.89273402897 728.899744036061 125.21 0.66405 125.21 124.89 125.55 0 144 44 5 0 0 0 1.2848E-05 1 81463 81.017 81.017 1 1.85 1.8142 0 8839000 3205800 5633100 27669 595 10440 10727 43317 43317 PFGVALLFGGVDEK 14 1 0 Unmodified _PFGVALLFGGVDEK_ 0 0 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.9019 2 724.892835 1447.77112 71346.01 1.0971 0.00079527 0.15858 0.00011495 1.2557 0.00091022 724.892526865721 728.899970199669 124.76 0.78851 124.76 124.44 125.23 0 207 54 6 0 0 0 3.2742E-09 1 82959 113.38 105.16 1 1.8338 1.9114 0 11026000 3336700 7689700 27670 595 10440 10727 43318 43318 PFLASLDGHR 10 0 1 Unmodified _PFLASLDGHR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9;E5RHM4 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 371.5332 3 371.533091 1111.57744 100110.2 0.086618 3.2182E-05 -0.19996 -7.4293E-05 -0.11334 -4.2111E-05 371.532894912879 374.869036025853 56.55 0.55684 56.55 56.329 56.886 0 185 49 5 0 0 0 0.00012938 2 31789 87.149 75.102 1 0.80404 0.83727 0 21778000 9398400 12380000 27671 402 10441 10728 43319;43320 43320 PFLASLDGHR 10 0 1 Unmodified _PFLASLDGHR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9;E5RHM4 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 374.8687 3 371.533091 1111.57744 101408.4 0.077833 2.8917E-05 -0.32844 -0.00012203 -0.25061 -9.311E-05 371.532885204519 374.868962378112 55.069 0.56294 55.069 54.854 55.417 0 163 42 5 0 0 0 0.00070068 2 31455 67.726 55.679 1 0.94215 0.95084 0 19682000 8192800 11489000 27672 402 10441 10728 43321;43322 43321 PFLFDTK 7 1 0 Unmodified _PFLFDTK_ 0 0 0 P27824;H0Y9Q7;Q16094;D6RGY2;Q6ZP56;D6RFL1;D6RB85;D6RDP7;H0Y9H1 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.2336 2 434.234179 866.453805 92243.65 0.31869 0.00013839 -0.22587 -9.808E-05 0.092823 4.0307E-05 434.233746107569 438.241527306725 79.729 0.83279 79.729 79.285 80.118 0 196 66 4 0 0 0 0.030163 1 48363 69.176 35.437 1 0.912 0.91036 0 14753000 7199100 7554000 27673 1526 10442 10729 43323 43323 PFLGIGLK 8 1 0 Unmodified _PFLGIGLK_ 0 0 0 B2RBR9;Q14974;B7Z5M1;J3KTM9;B7Z752 B2RBR9 B2RBR9 KPNB1 Importin subunit beta-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.769 2 422.768189 843.521825 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.867 1 93.867 93.367 94.367 0 0 0 0 0.02605 1 58295 64.803 8.2931 1 27674 880 10443 10730 43324 43324 PFLLPVEAVYSVPGR 15 0 1 Unmodified _PFLLPVEAVYSVPGR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.9681 2 822.461416 1642.90828 67055.44 1.0053 0.00082681 -0.1335 -0.0001098 0.87178 0.000717 822.962589652283 827.46538878989 124.65 0.73668 124.65 124.4 125.14 0 319 50 9 0 0 0 0.010953 1 80834 34.721 34.721 1 1.6721 1.7908 0 45702000 17052000 28649000 27675 1580 10444 10731 43325 43325 PFLLPVEAVYSVPGR 15 0 1 Unmodified _PFLLPVEAVYSVPGR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.465 2 822.461416 1642.90828 67181.14 1.092 0.00089815 0.084473 6.9475E-05 1.1765 0.00096762 822.461250996329 827.96716901996 124.27 0.67994 124.27 123.89 124.57 -7.6294E-06 264 44 9 0 0 0 1.0758E-10 1 82479 122.51 113.51 1 1.6738 1.9315 0 71244000 26495000 44749000 27676 1580 10444 10731 43326 43326 PFLWLAR 7 0 1 Unmodified _PFLWLAR_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.7661 2 451.765981 901.517408 91425.55 0.26008 0.00011749 0.094902 4.2874E-05 0.35498 0.00016037 451.765853650135 456.770021294305 105.18 1.1693 105.18 104.67 105.83 7.6294E-06 337 92 5 0 0 0 0.026837 2 64860 80.377 62.611 1 1.9146 1.9535 0 18748000 6930800 11818000 27677 1082 10445 10732 43327;43328 43328 PFLWLAR 7 0 1 Unmodified _PFLWLAR_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.7666 2 451.765981 901.517408 89983.17 0.25969 0.00011732 0.053768 2.429E-05 0.31345 0.00014161 451.765855964721 456.769960145481 104.25 1.1897 104.25 103.78 104.97 0 332 96 5 0 0 0 0.025889 2 65797 88.627 78.877 1 1.9633 2.0532 0 22608000 8853400 13755000 27678 1082 10445 10732 43329;43330 43330 PFLWLAR 7 0 1 Unmodified _PFLWLAR_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 456.7699 2 451.765981 901.517408 91754.8 0.035669 1.6114E-05 0.011457 5.1757E-06 0.047125 2.129E-05 451.765949718544 456.769958949214 116.44 0.99849 116.44 116.16 117.16 -7.6294E-06 140 40 6 0 0 0 0.058778 1 68352 51.036 41.287 1 1.2408 1.0368 0 3398900 1602600 1796300 27679 1082 10445 10732 43331 43331 PFLWLAR 7 0 1 Unmodified _PFLWLAR_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 456.7706 2 451.765981 901.517408 90295.32 0.34954 0.00015791 -0.06608 -2.9853E-05 0.28346 0.00012806 451.765816431216 456.770038894248 116.16 0.95574 116.16 115.9 116.86 0 127 44 4 0 0 0 0.051188 1 67201 54.525 44.776 1 1.2124 1.0439 0 3381700 1578100 1803500 27680 1082 10445 10732 43332 43332 PFNGEDYTCITFQPDLSK 18 1 0 Unmodified _PFNGEDYTCITFQPDLSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1070.4913 2 1066.48569 2130.95682 58774.06 0.50309 0.00053654 -0.35963 -0.00038354 0.14346 0.00015299 1066.98673191315 1070.99407861878 106.22 0.89468 106.22 105.93 106.82 0 420 64 11 0 0 0 1.4265E-05 2 65766 95.264 93.626 1 0.70635 0.79493 0 119760000 73262000 46495000 27681 1471 10446 10733 43333;43334 43334 PFNGEDYTCITFQPDLSK 18 1 0 Unmodified _PFNGEDYTCITFQPDLSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1066.9882 2 1066.48569 2130.95682 58511.24 0.45286 0.00048297 -0.41423 -0.00044177 0.038628 4.1197E-05 1066.98659312165 1070.49252791715 105.66 0.80564 105.66 105.38 106.18 0 416 58 11 0 0 0 3.4668E-22 2 66983 128.54 125.83 1 0.68683 0.78106 0 145380000 83337000 62047000 27682 1471 10446 10733 43335;43336 43336 PFNGEDYTCITFQPDLSK 18 1 0 Unmodified _PFNGEDYTCITFQPDLSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1070.4888 2 1066.48569 2130.95682 58507.32 0.12824 0.00013676 -0.099982 -0.00010663 0.028257 3.0136E-05 1066.9872561395 1070.99428937483 117.34 1.0492 117.34 117 118.05 0 323 46 12 0 0 0 0.027261 1 68994 36.572 36.45 1 1.4362 1.2165 0 59343000 23113000 36230000 27683 1471 10446 10733 43337 43337 PFNGEDYTCITFQPDLSK 18 1 0 Unmodified _PFNGEDYTCITFQPDLSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1066.9869 2 1066.48569 2130.95682 59215.53 0.074066 7.899E-05 -0.066416 -7.0831E-05 0.0076502 8.1589E-06 1066.98705782145 1070.99428391141 117.25 1.1867 117.25 116.86 118.04 0 350 55 12 0 0 0 8.9617E-08 2 67994 104.09 101.6 1 1.4141 1.1938 0 56147000 23075000 33072000 27684 1471 10446 10733 43338;43339 43338 PFNLSQGK 8 1 0 Unmodified _PFNLSQGK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.7474 2 445.74016 889.465767 NaN NaN NaN 0.16155 7.2011E-05 NaN NaN NaN NaN 34.372 0.73325 34.372 33.83 34.563 3.8147E-06 0 0 0 0.0079734 1 17472 81.119 57.262 1 NaN NaN 0 11277000 0 11277000 27685 1837 10447 10734 43340 43340 PFNLSQGK 8 1 0 Unmodified _PFNLSQGK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 449.7468 2 445.74016 889.465767 89631.34 -0.1599 -7.1273E-05 0.19088 8.5084E-05 0.030985 1.3811E-05 445.74013506739 449.747203807773 39.488 0.80468 39.488 39.05 39.855 0 261 62 6 0 0 0 0.0080668 1 18007 80.229 74.919 1 1.2829 1.0155 0 6248300 2586900 3661300 27686 1837 10447 10734 43341 43341 PFNLSQGK 8 1 0 Unmodified _PFNLSQGK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 449.7472 2 445.74016 889.465767 90746.91 -0.15087 -6.7249E-05 0.18037 8.0399E-05 0.029501 1.315E-05 445.740131558874 449.747217011586 39.406 0.81664 39.406 39.006 39.823 0 268 63 6 0 0 0 0.022432 1 17418 57.177 54.037 1 1.1794 0.96557 0 5448700 2497500 2951200 27687 1837 10447 10734 43342 43342 PFQCTFEGCGK 11 1 0 Unmodified _PFQCTFEGCGK_ 0 0 0 P25490;O15391 P25490 P25490 YY1;YY2 Transcriptional repressor protein YY1;Transcription factor YY2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.7881 2 665.781373 1329.54819 74890.74 0.43591 0.00029022 0.3282 0.00021851 0.76411 0.00050873 665.781693729839 669.788391494433 52.856 0.57347 52.856 52.54 53.113 0 171 45 5 0 0 0 0.0020164 1 26105 63.076 63.076 1 1.0682 0.89484 0 2199200 1054600 1144600 27688 1516 10448 10735 43343 43343 PFQCTFEGCGK 11 1 0 Unmodified _PFQCTFEGCGK_ 0 0 0 P25490;O15391 P25490 P25490 YY1;YY2 Transcriptional repressor protein YY1;Transcription factor YY2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.7899 2 665.781373 1329.54819 75020.15 0.41389 0.00027556 0.29033 0.00019329 0.70422 0.00046886 665.781467650333 669.78874909299 53.28 0.52163 53.28 52.976 53.498 0 162 36 6 0 0 0 0.0078138 1 25746 51.927 50.666 1 0.99556 0.82402 0 1604700 805390 799300 27689 1516 10448 10735 43344 43344 PFSQFWQPLLR 11 0 1 Unmodified _PFSQFWQPLLR_ 0 0 0 Q9Y4W2 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.8839 2 709.882604 1417.75066 73713.79 1.1083 0.00078677 0.1413 0.00010031 1.2496 0.00088708 709.882583069859 715.387911595326 132.04 0.27504 132.04 131.9 132.18 0 28 13 5 0 0 0 0.027154 1 79371 40.352 40.352 1 0.81011 0.73123 0 736070 588380 147690 27690 2146 10449 10736 43345 43345 PFSVDFFR 8 0 1 Unmodified _PFSVDFFR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8;J3KRR8;J3QSA7 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.7605 2 507.75581 1013.49707 86874.22 0.59349 0.00030135 -0.020577 -1.0448E-05 0.57291 0.0002909 507.755711473353 512.759826892861 107.33 1.1588 107.33 106.91 108.06 0 313 87 6 0 0 0 0.0088018 2 66712 77.058 62.9 1 1.0592 1.0961 0 20336000 10819000 9517000 27691 925 10450 10737 43346;43347 43347 PFSVDFFR 8 0 1 Unmodified _PFSVDFFR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8;J3KRR8;J3QSA7 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.7603 2 507.75581 1013.49707 85963.08 0.59794 0.00030361 -0.14396 -7.3096E-05 0.45398 0.00023051 507.755590355793 512.759799156479 106.61 1.1503 106.61 106.2 107.35 0 319 83 7 0 0 0 0.0059196 2 67789 88.942 71.557 1 1.0053 1.1007 0 32504000 16313000 16191000 27692 925 10450 10737 43348;43349 43349 PFSVDFFR 8 0 1 Unmodified _PFSVDFFR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8;J3KRR8;J3QSA7 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 512.7594 2 507.75581 1013.49707 87471.59 0.60588 0.00030764 -0.001828 -9.2816E-07 0.60406 0.00030671 507.755685485147 512.759840266228 118.62 0.6427 118.62 118.36 119 0 127 31 6 0 0 0 0.054494 1 69969 42.109 37.972 1 1.4139 1.1914 0 4667800 2136900 2530900 27693 925 10450 10737 43350 43350 PFSVDFFR 8 0 1 Unmodified _PFSVDFFR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8;J3KRR8;J3QSA7 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.7561 2 507.75581 1013.49707 85335.66 0.53832 0.00027334 0.093608 4.753E-05 0.63193 0.00032087 507.755781248912 512.759782860717 118.34 0.84285 118.34 118.11 118.96 0 149 40 6 0 0 0 0.052409 2 68923 42.869 38.732 1 1.4841 1.3089 0 3653100 1472100 2181000 27694 925 10450 10737 43351;43352 43352 PFTIDVDK 8 1 0 Unmodified _PFTIDVDK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.7548 2 467.74765 933.480748 89263.98 0.17686 8.2726E-05 -0.21233 -9.9315E-05 -0.035466 -1.6589E-05 467.747446867445 471.754664379049 66.107 0.75633 66.107 65.749 66.505 0 231 68 4 0 0 0 0.0091076 2 38154 75.738 57.89 1 0.77349 0.76224 0 24493000 14471000 10022000 27695 1421 10451 10738 43353;43354 43354 PFTIDVDK 8 1 0 Unmodified _PFTIDVDK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.7548 2 467.74765 933.480748 89591.95 0.042246 1.9761E-05 -0.15199 -7.1091E-05 -0.10974 -5.133E-05 467.74749469907 471.754690215159 64.985 0.85403 64.985 64.52 65.374 0 207 71 4 0 0 0 0.0045182 2 38271 93.374 62.084 1 0.75025 0.79042 0 23803000 14525000 9278200 27696 1421 10451 10738 43355;43356 43356 PFTIDVDK 8 1 0 Unmodified _PFTIDVDK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 467.7471 2 467.74765 933.480748 NaN NaN NaN 1.9497 0.00091197 NaN NaN NaN NaN 75.543 1.0382 75.543 75.184 76.222 0 0 0 0 0.010677 1 40093 76.478 55.923 1 NaN NaN 0 3422600 3422600 0 27697 1421 10451 10738 43357 43357 PFTIDVDK 8 1 0 Unmodified _PFTIDVDK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.7551 2 467.74765 933.480748 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.338 1 75.338 74.838 75.838 0 0 0 0 0.012472 1 40080 73.665 44.092 1 27698 1421 10451 10738 43358 43358 PFTIDVDK 8 1 0 Unmodified _PFTIDVDK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.7547 2 467.74765 933.480748 NaN NaN NaN -0.25889 -0.00012109 NaN NaN NaN NaN 75.821 0.91461 75.821 75.489 76.404 0 0 0 0 0.010677 1 39480 76.478 54.347 1 NaN NaN 0 4202800 0 4202800 27699 1421 10451 10738 43359 43359 PFVPNVHAAEFVPSFLR 17 0 1 Unmodified _PFVPNVHAAEFVPSFLR_ 0 0 0 Q8IYD1 Q8IYD1 Q8IYD1 GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.6829 3 643.012344 1926.0152 77575.83 1.2632 0.00081226 -0.28211 -0.0001814 0.9811 0.00063086 643.346534427429 646.34837491123 118.96 0.70378 118.96 118.65 119.36 0 156 43 6 0 0 0 0.00096039 1 76406 36.193 33.14 1 5.2003 5.3237 0 14504000 1873000 12631000 27700 1899 10452 10739 43360 43360 PFYLVPK 7 1 0 Unmodified _PFYLVPK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.2629 2 432.254914 862.495276 NaN NaN NaN 0.25161 0.00010876 NaN NaN NaN NaN 78.535 1.0021 78.535 77.929 78.931 0 0 0 0 0.04457 1 46191 61.006 27.513 1 NaN NaN 0 20544000 0 20544000 27701 1914 10453 10740 43361 43361 PGAEQSFLYGNHVLK 15 1 0 Unmodified _PGAEQSFLYGNHVLK_ 0 0 0 Q9Y221;J3QRD6;J3QRR4 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.9549 3 553.954495 1658.84166 80695.11 0.72901 0.00040384 0.082667 4.5794E-05 0.81167 0.00044963 554.288780875003 556.625928501367 71.844 1.0757 71.844 71.423 72.499 0 537 87 9 0 0 0 1.3127E-15 2 41885 111.12 106.85 1 1.0454 1.1831 0 151250000 74821000 76428000 27702 2119 10454 10741 43362;43363 43363 PGAEQSFLYGNHVLK 15 1 0 Unmodified _PGAEQSFLYGNHVLK_ 0 0 0 Q9Y221;J3QRD6;J3QRR4 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.6257 3 553.954495 1658.84166 80804.54 0.48098 0.00026644 -0.18064 -0.00010006 0.30034 0.00016638 554.288700948024 556.625723569564 70.176 1.0958 70.176 69.845 70.941 0 546 89 9 0 0 0 6.8526E-05 1 41858 67.838 67.838 1 0.99612 1.1447 0 172450000 81691000 90758000 27703 2119 10454 10741 43364 43364 PGAEQSFLYGNHVLK 15 1 0 Unmodified _PGAEQSFLYGNHVLK_ 0 0 0 Q9Y221;J3QRD6;J3QRR4 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.6259 3 553.954495 1658.84166 80521.64 0.36328 0.00020124 0.064447 3.5701E-05 0.42773 0.00023694 553.954476495232 556.625941370657 82.122 1.3159 82.122 81.78 83.096 0 426 79 10 0 0 0 0.00092364 2 44497 43.316 39.413 1 1.1702 0.94722 0 23323000 10825000 12498000 27704 2119 10454 10741 43365;43366 43365 PGAEQSFLYGNHVLK 15 1 0 Unmodified _PGAEQSFLYGNHVLK_ 0 0 0 Q9Y221;J3QRD6;J3QRR4 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.9544 3 553.954495 1658.84166 80777.16 0.45831 0.00025388 0.019276 1.0678E-05 0.47759 0.00026456 553.954418931318 556.625814962244 82.165 0.98454 82.165 81.844 82.828 0 365 58 10 0 0 0 0.00064606 2 43715 44.925 41.085 1 1.1946 0.95742 0 19699000 8721400 10978000 27705 2119 10454 10741 43367;43368 43368 PGAHLTVK 8 1 0 Unmodified _PGAHLTVK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;F8VZ49;A0A024RC46;A0A024QZ98;Q32P51;F8VYN5;F8VTQ5;B4DP35;F8W646;P51991;B4E3E6;B4DDB6;Q65ZQ3 F8W6I7;P51991 F8W6I7 HNRNPA1;HNRPA1;hCG_2020860;RP11-78J21.1;HNRNPA1L2;HNRNPA3;HNRPA3;D10S102 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoprotein A3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.7527 2 411.745245 821.475937 NaN NaN NaN 0.29298 0.00012063 NaN NaN NaN NaN 19.832 0.1985 19.832 19.768 19.966 -1.9073E-06 0 0 0 0.0030157 1 6347 104.37 57.995 1 NaN NaN 0 8121800 0 8121800 27706 317;1598 10455 10742 43369 43369 PGDLIFAK 8 1 0 Unmodified _PGDLIFAK_ 0 0 0 O75475;Q05CM9;Q8N4N4 O75475;Q8N4N4 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.7467 2 430.747453 859.480354 92204.19 -0.15854 -6.8292E-05 0.27036 0.00011645 0.11181 4.8163E-05 430.747342829202 434.754571568032 66.725 0.85069 66.725 66.427 67.278 0 213 63 5 0 0 0 0.012693 2 38417 67.032 46.227 1 0.73565 0.75638 0 28749000 15263000 13485000 27707 1405;1908 10456 10743 43370;43371 43371 PGDLIFAK 8 1 0 Unmodified _PGDLIFAK_ 0 0 0 O75475;Q05CM9;Q8N4N4 O75475;Q8N4N4 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.7473 2 430.747453 859.480354 92553.91 -0.011329 -4.88E-06 0.31553 0.00013591 0.3042 0.00013103 430.747403734789 434.754651196518 65.476 0.81497 65.476 65.135 65.95 0 246 67 5 0 0 0 0.0087497 2 38514 77.282 54.478 1 0.71203 0.73332 0 25187000 14403000 10784000 27708 1405;1908 10456 10743 43372;43373 43372 PGEGTAPLPPPGQK 14 1 0 Unmodified _PGEGTAPLPPPGQK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.3671 2 673.359159 1344.70376 76196.9 0.27712 0.0001866 0.36073 0.0002429 0.63784 0.0004295 673.359763564578 677.366284019788 42.979 0.85091 42.979 42.606 43.457 0 115 52 4 0 0 0 0.048229 1 19683 25.979 20.337 1 2.5254 2.2338 0 874830 262130 612700 27709 2002 10457 10744 43374 43374 PGELCAQHFTLS 12 0 0 Unmodified _PGELCAQHFTLS_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.3232 2 680.321719 1358.62889 NaN NaN NaN -0.10847 -7.3798E-05 NaN NaN NaN NaN 77.859 0.46875 77.859 77.622 78.09 0 0 0 0 0.00052134 2 46095 88.056 76.844 1 27710 2007 10458 10745 43375;43376 43376 PGELCAQHFTLS 12 0 0 Unmodified _PGELCAQHFTLS_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.823 2 680.321719 1358.62889 NaN NaN NaN -0.19998 -0.00013605 NaN NaN NaN NaN 89.139 0.50606 89.139 88.907 89.413 0 0 0 0 0.050843 1 49244 41.704 31.473 1 27711 2007 10458 10745 43377 43377 PGEYSYFSPR 10 0 1 Unmodified _PGEYSYFSPR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.7811 2 601.77747 1201.54039 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.634 1 59.634 59.134 60.134 0 0 0 0 4.0436E-05 1 33998 89.247 51.772 1 27712 740 10459 10746 43378 43378 PGFSIADK 8 1 0 Unmodified _PGFSIADK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.722 2 417.721436 833.428318 92401.31 0.44838 0.0001873 1.1161 0.00046624 1.5645 0.00065354 417.721644988483 421.729054476183 44.678 1.1143 44.678 44.334 45.449 0 524 99 8 0 0 0 0.0028899 2 23918 98.523 41.811 1 0.92745 1.1012 0 529580000 271840000 257740000 27713 1652 10460 10747 43379;43380 43380 PGFSIADK 8 1 0 Unmodified _PGFSIADK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.7215 2 417.721436 833.428318 92904.98 0.76819 0.00032089 -0.12514 -5.2274E-05 0.64305 0.00026861 417.721263252899 421.728413677108 43.985 1.2498 43.985 43.553 44.803 0 534 104 7 0 0 0 0.0054682 2 23793 90.37 34.866 1 0.92675 1.0913 0 480150000 240390000 239760000 27714 1652 10460 10747 43381;43382 43382 PGFSIADKK 9 2 0 Unmodified _PGFSIADKK_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 326.8577 3 321.515037 961.523281 105151.9 0.06223 2.0008E-05 0.054331 1.7468E-05 0.11656 3.7476E-05 321.515000624368 326.857767636704 28.338 0.4987 28.338 28.17 28.669 0 143 32 7 0 0 0 0.002939 2 13322 48.091 29.231 1 1.0627 1.2541 0 104810000 49738000 55073000 27715 1652 10461 10748 43383;43384 43384 PGFSIADKK 9 2 0 Unmodified _PGFSIADKK_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.769 2 481.768917 961.523281 86077.14 0.062139 2.9937E-05 0.9741 0.00046929 1.0362 0.00049923 481.769068038989 489.783735066597 28.377 0.34401 28.377 28.196 28.54 0 103 23 7 0 0 0 2.3945E-11 2 13361 151.97 70.083 1 1.0076 1.1892 0 94217000 50611000 43605000 27716 1652 10461 10748 43385;43386 43386 PGFSIADKK 9 2 0 Unmodified _PGFSIADKK_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 321.515 3 321.515037 961.523281 105429 -0.15963 -5.1322E-05 -0.02835 -9.115E-06 -0.18798 -6.0437E-05 321.514945095953 326.857742676144 27.613 0.35408 27.613 27.441 27.795 1.9073E-06 92 18 7 0 0 0 0.0012465 2 12820 56.916 35.452 1 1.0653 1.2383 0 134540000 68135000 66404000 27717 1652 10461 10748 43387;43388 43387 PGFSIADKK 9 2 0 Unmodified _PGFSIADKK_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.7689 2 481.768917 961.523281 87074.59 -0.078732 -3.7931E-05 0.37219 0.00017931 0.29345 0.00014138 481.769022633314 489.783345373718 27.638 0.41373 27.638 27.359 27.773 0 84 21 7 0 0 0 3.2038E-09 1 12863 150.36 65.446 1 1.0065 1.1691 0 111110000 60434000 50680000 27718 1652 10461 10748 43389 43389 PGFSIADKK 9 2 0 Unmodified _PGFSIADKK_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.7833 2 481.768917 961.523281 86459.63 0.028145 1.3559E-05 0.37454 0.00018044 0.40269 0.000194 481.768962790927 489.783307176923 31.658 0.39471 31.658 31.476 31.871 -1.9073E-06 102 21 6 0 0 0 0.0035905 1 13384 76.221 25.518 1 1.0368 0.8873 0 9760500 4540900 5219600 27719 1652 10461 10748 43390 43390 PGFSIADKK 9 2 0 Unmodified _PGFSIADKK_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 321.5148 3 321.515037 961.523281 104742 -0.2309 -7.4237E-05 0.059962 1.9279E-05 -0.17094 -5.4958E-05 321.514990033434 326.857783791521 31.669 0.48027 31.669 31.462 31.942 0 107 26 6 0 0 0 0.051639 1 13396 14.635 11.632 1 1.1105 0.94927 0 12308000 6041300 6266800 27720 1652 10461 10748 43391 43391 PGFSIADKK 9 2 0 Unmodified _PGFSIADKK_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.7688 2 481.768917 961.523281 86627.8 0.29786 0.0001435 -0.322 -0.00015513 -0.024146 -1.1633E-05 481.768588472223 489.78291613026 31.602 0.53666 31.602 31.339 31.876 0 118 28 6 0 0 0 0.019436 1 12910 58.23 16.801 1 0.96287 0.81714 0 6107600 3231300 2876300 27721 1652 10461 10748 43392 43392 PGGLGSSSLYGLGASR 16 0 1 Unmodified _PGGLGSSSLYGLGASR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.8847 2 739.88353 1477.75251 71204.64 1.0102 0.00074741 0.22219 0.00016439 1.2324 0.0009118 739.883900378658 744.887041627961 80.695 0.58569 80.695 80.406 80.991 0 206 45 6 0 0 0 1.1553E-17 2 47915 132.5 124.4 1 1.5102 1.5361 0 29698000 14518000 15180000 + 27722 1171;1158 10462 10749 43393;43394 43393 PGGLGSSSLYGLGASR 16 0 1 Unmodified _PGGLGSSSLYGLGASR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8871 2 739.88353 1477.75251 71604.8 0.91479 0.00067684 0.057697 4.2689E-05 0.97249 0.00071953 739.883944858256 744.886904682905 79.678 0.63141 79.678 79.385 80.017 0 196 49 6 0 0 0 1.7087E-08 2 48313 102.97 102.97 1 1.5895 1.7409 0 31926000 12064000 19861000 + 27723 1171;1158 10462 10749 43395;43396 43395 PGGLGSSSLYGLGASRPR 18 0 2 Unmodified _PGGLGSSSLYGLGASRPR_ 0 0 1 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.977 3 577.97607 1730.90638 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.544 1 78.544 78.044 79.044 0 0 0 0 0.02535 1 41355 33.697 22.642 1 + 27724 1171;1158 10463 10750 43397 43397 PGGLLLGDVAPNFEANTTVGR 21 0 1 Unmodified _PGGLLLGDVAPNFEANTTVGR_ 0 0 0 V9HWC7;P30041;B4DUK1 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1055.0563 2 1049.55001 2097.08547 NaN NaN NaN -0.028892 -3.0324E-05 NaN NaN NaN NaN 128.03 0.32933 128.03 127.83 128.16 0 0 0 0 3.9051E-06 2 77259 62.162 35.621 1 NaN NaN 0 2391300 0 2391300 27725 1527 10464 10751 43398;43399 43398 PGGLLLGDVAPNFEANTTVGR 21 0 1 Unmodified _PGGLLLGDVAPNFEANTTVGR_ 0 0 0 V9HWC7;P30041;B4DUK1 V9HWC7 V9HWC7 HEL-S-128m;PRDX6 Peroxiredoxin-6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1054.5565 2 1049.55001 2097.08547 60040.45 0.40712 0.00042729 0.87506 0.00091842 1.2822 0.0013457 1049.55037217451 1054.55556591211 127.85 0.39471 127.85 127.65 128.04 7.6294E-06 48 15 6 0 0 0 0.0057824 1 76300 25.322 20.93 1 2.6839 2.3292 0 4310100 1759200 2550900 27726 1527 10464 10751 43400 43400 PGGNVEGATQSLAEQMR 17 0 1 Oxidation (M) _PGGNVEGATQSLAEQM(ox)R_ PGGNVEGATQSLAEQM(1)R PGGNVEGATQSLAEQM(62.34)R 0 1 0 Q13501;B4E3V2;E7EMC7 Q13501 Q13501 SQSTM1 Sequestosome-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.4214 2 880.915232 1759.81591 NaN NaN NaN -0.14834 -0.00013067 NaN NaN NaN NaN 45.608 0.38293 45.608 45.379 45.762 0 0 0 0 0.00027348 1 24467 62.338 48.911 1 NaN NaN 0 7239200 0 7239200 27727 1714 10465 10752 43401 43401 1544 PGGNVEGATQSLAEQMR 17 0 1 Oxidation (M) _PGGNVEGATQSLAEQM(ox)R_ PGGNVEGATQSLAEQM(1)R PGGNVEGATQSLAEQM(50.21)R 0 1 0 Q13501;B4E3V2;E7EMC7 Q13501 Q13501 SQSTM1 Sequestosome-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 880.9149 2 880.915232 1759.81591 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.616 1 45.616 45.116 46.116 0 0 0 0 0.002548 1 24568 50.207 32.84 1 27728 1714 10465 10752 43402 43402 1544 PGGNVEGATQSLAEQMR 17 0 1 Oxidation (M) _PGGNVEGATQSLAEQM(ox)R_ PGGNVEGATQSLAEQM(1)R PGGNVEGATQSLAEQM(127.71)R 0 1 0 Q13501;B4E3V2;E7EMC7 Q13501 Q13501 SQSTM1 Sequestosome-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.9204 2 880.915232 1759.81591 NaN NaN NaN -0.15352 -0.00013524 NaN NaN NaN NaN 44.611 0.35738 44.611 44.399 44.757 -3.8147E-06 0 0 0 1.0714E-19 1 24312 127.71 113.3 1 NaN NaN 0 7387700 0 7387700 27729 1714 10465 10752 43403 43403 1544 PGHIINPIK 9 1 0 Unmodified _PGHIINPIK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.8015 2 494.800552 987.58655 86804.89 0.30978 0.00015328 0.3106 0.00015368 0.62038 0.00030697 494.800750935922 498.807683454123 36.536 0.33203 36.536 36.388 36.72 0 89 30 4 0 0 0 0.00059672 1 18496 97.033 67.884 1 0.92578 0.94993 0 14441000 6531200 7909900 27730 2008 10466 10753 43404 43404 PGHIINPIK 9 1 0 Unmodified _PGHIINPIK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 330.2036 3 330.202793 987.58655 104823.6 0.49199 0.00016246 0.021251 7.0172E-06 0.51324 0.00016947 330.2027857169 332.874183125499 34.39 0.55156 34.39 34.268 34.82 0 194 43 7 0 0 0 0.0058825 2 17399 47.349 47.349 1 0.99222 1.1151 0 73487000 32921000 40566000 27731 2008 10466 10753 43405;43406 43405 PGHIINPIK 9 1 0 Unmodified _PGHIINPIK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.8017 2 494.800552 987.58655 NaN NaN NaN -0.81951 -0.00040549 NaN NaN NaN NaN 34.41 0.29517 34.41 34.268 34.563 -3.8147E-06 0 0 0 1.8777E-05 1 17462 111.65 85.911 1 NaN NaN 0 9282300 9282300 0 27732 2008 10466 10753 43407 43407 PGHLQEGFGCVVTNR 15 0 1 Unmodified _PGHLQEGFGCVVTNR_ 0 0 0 Q63HR1;Q5VU21;Q8NC51 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.9431 3 557.607101 1669.79947 82832.48 0.36819 0.00020531 0.0056073 3.1267E-06 0.3738 0.00020843 557.606957305054 560.943283459826 62.215 0.40279 62.215 62.001 62.404 3.8147E-06 101 32 5 0 0 0 0.06 1 31950 14.419 10.317 1 1.1798 1.036 0 1779200 898670 880500 27733 1832 10467 10754 43408 43408 PGHLQFYSLQSDK 13 1 0 Unmodified _PGHLQFYSLQSDK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.257 3 507.256174 1518.74669 NaN NaN NaN -0.14453 -7.3314E-05 NaN NaN NaN NaN 61.52 1.1679 61.52 60.771 61.939 3.8147E-06 0 0 0 0.030139 1 34957 24.929 10.053 1 NaN NaN 0 10788000 10788000 0 27734 716 10468 10755 43409 43409 PGHLQFYSLQSDK 13 1 0 Unmodified _PGHLQFYSLQSDK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.5898 3 507.256174 1518.74669 NaN NaN NaN -0.29115 -0.00014769 NaN NaN NaN NaN 59.585 0.89296 59.585 59.06 59.953 -3.8147E-06 0 0 0 0.0014379 1 34491 42.797 35.595 1 NaN NaN 0 7940800 7940800 0 27735 716 10468 10755 43410 43410 PGHPLQPDFFLDEYPEAVSK 20 1 0 Unmodified _PGHPLQPDFFLDEYPEAVSK_ 0 0 0 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.7137 3 762.707426 2285.10045 NaN NaN NaN 0.44206 0.00033716 NaN NaN NaN NaN 107.43 0.47743 107.43 107.18 107.66 0 0 0 0 1.8262E-05 1 68653 59.342 49.812 1 NaN NaN 0 6263700 0 6263700 27736 70 10469 10756 43411 43411 PGLNVVLEGPK 11 1 0 Unmodified _PGLNVVLEGPK_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.8306 2 561.829506 1121.64446 81330.98 0.85722 0.00048161 0.28521 0.00016024 1.1424 0.00064185 561.829677072258 565.836684004084 82.976 1.0207 82.976 82.655 83.676 0 447 86 8 0 0 0 3.0526E-17 3 49505 160.53 141.43 1 0.96694 1.1436 0 413310000 210000000 203310000 27737 1316 10470 10757 43412;43413;43414 43413 PGLNVVLEGPK 11 1 0 Unmodified _PGLNVVLEGPK_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.8378 2 561.829506 1121.64446 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.581 1 83.581 83.081 84.081 0 0 0 0 0.052797 1 50044 43.168 21.868 1 27738 1316 10470 10757 43415 43415 PGLNVVLEGPK 11 1 0 Unmodified _PGLNVVLEGPK_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.8295 2 561.829506 1121.64446 81601.38 0.75686 0.00042522 0.016413 9.2214E-06 0.77327 0.00043445 561.829565908468 565.836511605113 81.904 0.89061 81.904 81.577 82.467 0 459 79 10 0 0 0 3.2465E-17 4 49942 160.36 139.28 1 0.96155 1.1336 0 678930000 352810000 326130000 27739 1316 10470 10757 43416;43417;43418;43419 43416 PGLNVVLEGPK 11 1 0 Unmodified _PGLNVVLEGPK_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.8365 2 561.829506 1121.64446 79958.42 0.7108 0.00039935 0.011123 6.2495E-06 0.72193 0.0004056 561.829467838163 565.836565320018 94.848 1.1816 94.848 94.47 95.652 -7.6294E-06 376 81 8 0 0 0 0.0004486 3 52943 77.662 66.069 1 1.0114 0.83762 0 44493000 21497000 22997000 27740 1316 10470 10757 43420;43421;43422 43420 PGLNVVLEGPK 11 1 0 Unmodified _PGLNVVLEGPK_ 0 0 0 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.8295 2 561.829506 1121.64446 80275.05 0.6277 0.00035266 -0.19107 -0.00010735 0.43663 0.00024531 561.829332051456 565.836479172112 94.717 1.1827 94.717 94.318 95.501 -7.6294E-06 345 78 9 0 0 0 0.00081909 3 52016 72.243 62.886 1 0.97162 0.80371 0 32856000 16784000 16072000 27741 1316 10470 10757 43423;43424;43425 43424 PGLNVVLEGPKK 12 2 0 Unmodified _PGLNVVLEGPKK_ 0 0 1 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.9298 3 417.587084 1249.73942 93385.56 0.31059 0.0001297 -0.44105 -0.00018418 -0.13046 -5.448E-05 417.586828163447 422.929521044326 59.723 0.51057 59.723 59.492 60.002 3.8147E-06 233 42 9 0 0 0 8.6876E-05 1 34013 72.34 69.018 1 0.96077 1.134 0 81639000 38774000 42865000 27742 1316 10471 10758 43426 43426 PGLNVVLEGPKK 12 2 0 Unmodified _PGLNVVLEGPKK_ 0 0 1 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.9296 3 417.587084 1249.73942 92622 0.35746 0.00014927 -0.04754 -1.9852E-05 0.30992 0.00012942 417.587032895783 422.929766359871 58.346 0.28431 58.346 58.241 58.525 0 102 19 8 0 0 0 5.2829E-05 2 33941 89.301 89.301 1 1.0684 1.2414 0 121290000 54204000 67086000 27743 1316 10471 10758 43427;43428 43427 PGLNVVLEGPKK 12 2 0 Unmodified _PGLNVVLEGPKK_ 0 0 1 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 417.587 3 417.587084 1249.73942 91833.5 -0.42081 -0.00017572 0.27554 0.00011506 -0.14527 -6.0663E-05 417.587110308618 422.929988504829 69.496 0.34134 69.496 69.294 69.635 0 124 24 8 0 0 0 0.0013564 2 36428 51.013 51.013 1 0.97909 0.83296 0 30689000 13482000 17207000 27744 1316 10471 10758 43429;43430 43429 PGLNVVLEGPKK 12 2 0 Unmodified _PGLNVVLEGPKK_ 0 0 1 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.892 2 625.876988 1249.73942 74595.06 0.36674 0.00022953 -0.10304 -6.4488E-05 0.2637 0.00016504 626.378466962304 633.891714866069 69.496 0.19713 69.496 69.377 69.574 7.6294E-06 42 13 4 0 0 0 0.019989 1 36474 60.064 60.064 1 1.2596 1.0941 0 3411100 1240500 2170600 27745 1316 10471 10758 43431 43431 PGLNVVLEGPKK 12 2 0 Unmodified _PGLNVVLEGPKK_ 0 0 1 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 417.5869 3 417.587084 1249.73942 91491.2 -0.42677 -0.00017821 0.4734 0.00019769 0.04663 1.9472E-05 417.587175902384 422.93006136155 69.83 0.42321 69.83 69.64 70.063 0 172 31 7 0 0 0 0.0039623 2 35845 42.629 42.629 1 1.0526 0.89124 0 15603000 7247900 8355400 27746 1316 10471 10758 43432;43433 43433 PGLQTHGFIIR 11 0 1 Unmodified _PGLQTHGFIIR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.9081 3 413.571657 1237.69314 93564.83 0.14511 6.0013E-05 -0.052963 -2.1904E-05 0.092147 3.8109E-05 413.571596072542 416.907662034022 67.418 0.88824 67.418 67.088 67.977 0 370 74 7 0 0 0 0.0012534 2 38947 72.006 72.006 1 1.1179 1.2187 0 51510000 23063000 28447000 27747 1741 10472 10759 43434;43435 43435 PGLQTHGFIIR 11 0 1 Unmodified _PGLQTHGFIIR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.572 3 413.571657 1237.69314 93274.27 0.14551 6.0179E-05 -0.14481 -5.9891E-05 0.00069694 2.8824E-07 413.571620324305 416.907611929381 65.241 0.93727 65.241 64.778 65.715 0 355 76 6 0 0 0 1.5245E-08 2 38541 117.52 100.15 1 1.061 1.188 0 45017000 23057000 21960000 27748 1741 10472 10759 43436;43437 43436 PGLQTHGFIIR 11 0 1 Unmodified _PGLQTHGFIIR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 413.5719 3 413.571657 1237.69314 93168.58 -0.22926 -9.4818E-05 0.16427 6.7939E-05 -0.064992 -2.6879E-05 413.571643855231 416.907893815572 76.293 0.81799 76.293 76.023 76.841 0 277 58 7 0 0 0 0.0081978 2 40672 42.802 42.802 1 1.1804 1.014 0 8005800 3435000 4570800 27749 1741 10472 10759 43438;43439 43438 PGLQTHGFIIR 11 0 1 Unmodified _PGLQTHGFIIR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 413.5718 3 413.571657 1237.69314 93744.18 -0.40182 -0.00016618 0.41884 0.00017322 0.017018 7.0381E-06 413.571676498717 416.90801239967 76.29 0.77823 76.29 75.997 76.775 0 225 53 8 0 0 0 0.025442 1 39833 30.205 30.205 1 1.1917 0.98197 0 8378600 3666300 4712300 27750 1741 10472 10759 43440 43440 PGLTYQEALESEK 13 1 0 Unmodified _PGLTYQEALESEK_ 0 0 0 D3DS96;Q9NRL2;Q05CW0;Q32ND1 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.8717 2 732.864471 1463.71439 NaN NaN NaN -0.47145 -0.00034551 NaN NaN NaN NaN 68.158 0.35328 68.158 67.942 68.296 0 0 0 0 0.0038515 1 39541 63.624 44.381 1 NaN NaN 0 10274000 0 10274000 27751 1187 10473 10760 43441 43441 PGLTYQEALESEK 13 1 0 Unmodified _PGLTYQEALESEK_ 0 0 0 D3DS96;Q9NRL2;Q05CW0;Q32ND1 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.8721 2 732.864471 1463.71439 NaN NaN NaN -1.8559 -0.0013601 NaN NaN NaN NaN 78.479 0.51439 78.479 78.285 78.799 0 0 0 0 0.025798 1 42113 44.922 31.966 1 NaN NaN 0 1708500 0 1708500 27752 1187 10473 10760 43442 43442 PGMLLTGTVSSLEDHGYLVDIGVDGTR 27 0 1 Oxidation (M) _PGM(ox)LLTGTVSSLEDHGYLVDIGVDGTR_ PGM(1)LLTGTVSSLEDHGYLVDIGVDGTR PGM(92.28)LLTGTVSSLEDHGYLVDIGVDGTR 0 1 0 Q14690;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 944.1426 3 940.135768 2817.38547 62638.99 0.68648 0.00064538 -0.81347 -0.00076477 -0.127 -0.00011939 940.4686128545 943.47065802337 116.8 0.42487 116.8 116.64 117.07 -7.6294E-06 127 25 8 0 0 0 1.3881E-22 1 76435 92.275 92.275 1 1.462 1.5751 0 25899000 8931900 16967000 27753 1741 10474 10761 43443 43443 1585 PGMVVTFAPVNVTTEVK 17 1 0 Oxidation (M) _PGM(ox)VVTFAPVNVTTEVK_ PGM(1)VVTFAPVNVTTEVK PGM(125.28)VVTFAPVNVTTEVK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.4816 2 902.979312 1803.94407 63115.71 0.57577 0.00051991 -0.07795 -7.0387E-05 0.49782 0.00044952 902.979493069091 906.986494528169 102.63 1.6207 102.63 102.02 103.64 7.6294E-06 923 135 11 0 0 0 2.3835E-15 3 63022 125.28 117.18 1 3.5578 4.2031 0 383620000 85055000 298570000 27754 1658;1790 10475 10762 43444;43445;43446 43445 1438;1656 PGMVVTFAPVNVTTEVK 17 1 0 Oxidation (M) _PGM(ox)VVTFAPVNVTTEVK_ PGM(1)VVTFAPVNVTTEVK PGM(150.06)VVTFAPVNVTTEVK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.4818 2 902.979312 1803.94407 63507.59 0.44707 0.0004037 -0.020116 -1.8164E-05 0.42695 0.00038553 903.480974053765 906.986596804627 101.96 1.51 101.96 101.34 102.85 0 851 119 11 0 0 0 1.1617E-26 3 64045 150.06 150.06 1 3.5672 4.2055 0 672150000 147370000 524780000 27755 1658;1790 10475 10762 43447;43448;43449 43448 1438;1656 PGMVVTFAPVNVTTEVK 17 1 0 Oxidation (M) _PGM(ox)VVTFAPVNVTTEVK_ PGM(1)VVTFAPVNVTTEVK PGM(71.18)VVTFAPVNVTTEVK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 902.98 2 902.979312 1803.94407 62862.79 0.68589 0.00061935 0.2591 0.00023396 0.94499 0.00085331 902.979402405248 907.488519767926 114.69 0.72527 114.69 114.35 115.08 0 251 33 10 0 0 0 3.3339E-05 2 66901 71.176 71.176 1 1.0447 0.83102 0 19408000 9352800 10055000 27756 1658;1790 10475 10762 43450;43451 43451 1438;1656 PGMVVTFAPVNVTTEVK 17 1 0 Oxidation (M) _PGM(ox)VVTFAPVNVTTEVK_ PGM(1)VVTFAPVNVTTEVK PGM(69.45)VVTFAPVNVTTEVK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 907.488 2 902.979312 1803.94407 64455.89 0.60498 0.00054629 -0.21804 -0.00019689 0.38694 0.0003494 902.979284295596 907.487674042919 124.26 0.74048 124.26 123.81 124.55 0 141 30 11 0 0 0 3.4316E-05 2 74321 69.451 69.451 1 2.0395 1.6238 0 9862700 3553200 6309500 27757 1658;1790 10475 10762 43452;43453 43452 1438;1656 PGMVVTFAPVNVTTEVK 17 1 0 Oxidation (M) _PGM(ox)VVTFAPVNVTTEVK_ PGM(1)VVTFAPVNVTTEVK PGM(102.66)VVTFAPVNVTTEVK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 903.4821 2 902.979312 1803.94407 62741.67 0.40592 0.00036654 0.19797 0.00017876 0.60389 0.0005453 903.480900807451 906.98674935011 114.65 0.71477 114.65 114.17 114.89 0 213 30 10 0 0 0 2.7514E-09 2 65877 102.66 102.66 1 1.0256 0.82347 0 17890000 8661400 9228900 27758 1658;1790 10475 10762 43454;43455 43455 1438;1656 PGMVVTFAPVNVTTEVK 17 1 0 Oxidation (M) _PGM(ox)VVTFAPVNVTTEVK_ PGM(1)VVTFAPVNVTTEVK PGM(92.19)VVTFAPVNVTTEVK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 906.9871 2 902.979312 1803.94407 65091.7 0.43405 0.00039194 -0.13755 -0.0001242 0.2965 0.00026773 902.9796878334 906.986400192883 124.09 0.44065 124.09 123.84 124.28 -7.6294E-06 112 16 10 0 0 0 4.1984E-07 1 73375 92.19 92.19 1 1.9495 1.6008 0 9357700 3723200 5634500 27759 1658;1790 10475 10762 43456 43456 1438;1656 PGMVVTFAPVNVTTEVK 17 1 0 Unmodified _PGMVVTFAPVNVTTEVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 898.9896 2 894.981855 1787.94916 64959.29 0.75041 0.00067161 0.060075 5.3766E-05 0.81049 0.00072537 894.982291510117 898.98901783484 113 0.52386 113 112.75 113.27 0 198 37 8 0 0 0 1.3039E-06 1 71394 88.187 88.187 1 1.9643 2.1185 0 37458000 14396000 23062000 27760 1658;1790 10475 10763 43457 43457 PGMVVTFAPVNVTTEVK 17 1 0 Unmodified _PGMVVTFAPVNVTTEVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.4456 2 894.981855 1787.94916 64673.7 0.64605 0.0005782 -0.30184 -0.00027015 0.3442 0.00030806 895.482724246176 898.98878193339 112.42 0.49922 112.42 112.2 112.7 -7.6294E-06 220 36 9 0 0 0 7.7205E-10 1 72735 85.288 85.288 1 2.0239 2.2294 0 43163000 15987000 27175000 27761 1658;1790 10475 10763 43458 43458 PGMVVTFAPVNVTTEVK 17 1 0 Unmodified _PGMVVTFAPVNVTTEVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 894.9826 2 894.981855 1787.94916 63660.41 0.61176 0.00054752 -0.013219 -1.1831E-05 0.59854 0.00053568 894.981807744631 898.988989695127 124.25 0.60265 124.25 123.97 124.57 0 161 24 10 0 0 0 1.6343E-12 2 74439 115.14 115.14 1 1.952 1.6175 0 44806000 15978000 28828000 27762 1658;1790 10475 10763 43459;43460 43460 PGMVVTFAPVNVTTEVK 17 1 0 Unmodified _PGMVVTFAPVNVTTEVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 898.9893 2 894.981855 1787.94916 64004.83 0.36018 0.00032235 0.17286 0.00015471 0.53304 0.00047706 894.982307987348 898.989125437354 124.12 0.68062 124.12 123.78 124.46 0 140 26 9 0 0 0 3.8042E-07 2 73313 96.64 96.64 1 1.8177 1.5153 0 41105000 14753000 26352000 27763 1658;1790 10475 10763 43461;43462 43461 PGNFPSLAVSSNEFEPSNSHMVK 23 1 0 Oxidation (M) _PGNFPSLAVSSNEFEPSNSHM(ox)VK_ PGNFPSLAVSSNEFEPSNSHM(1)VK PGNFPSLAVSSNEFEPSNSHM(40.67)VK 0 1 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.3996 3 831.056789 2490.14854 NaN NaN NaN 0.15073 0.00012526 NaN NaN NaN NaN 87.586 0.32854 87.586 87.373 87.702 0 0 0 0 0.0020511 1 52755 40.668 33.308 1 NaN NaN 0 8436100 0 8436100 27764 1336 10476 10764 43463 43463 1009 PGNQNTQVTEAWNK 14 1 0 Unmodified _PGNQNTQVTEAWNK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08;F8VR77;H0YIN7;F8W0A3 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.8892 2 793.881518 1585.74848 68551.38 0.48514 0.00038514 -0.24267 -0.00019265 0.24247 0.00019249 793.882076406483 797.888590665888 39.674 0.36242 39.674 39.518 39.881 0 97 31 5 0 0 0 3.7473E-10 2 20584 123.95 119.43 1 2.3645 2.3195 0 22747000 7541700 15206000 27765 328 10477 10765 43464;43465 43464 PGNQNTQVTEAWNK 14 1 0 Unmodified _PGNQNTQVTEAWNK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08;F8VR77;H0YIN7;F8W0A3 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.889 2 793.881518 1585.74848 68371.57 0.61053 0.00048469 -0.36212 -0.00028748 0.24841 0.00019721 794.382873302998 797.888764710675 38.671 0.28337 38.671 38.524 38.807 0 93 25 5 0 0 0 1.6838E-37 2 20335 165.35 165.35 1 2.712 2.8843 0 20650000 6779000 13871000 27766 328 10477 10765 43466;43467 43467 PGPDTFPDYGDVLR 14 0 1 Unmodified _PGPDTFPDYGDVLR_ 0 0 0 Q59FG7;Q53F85;B2R7M0;A8K822;A0A024RCS3;B4E1C1;Q9UER7 Q59FG7 Q59FG7 DAXX Death domain-associated protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.8704 2 774.870088 1547.72562 NaN NaN NaN -0.71486 -0.00055392 NaN NaN NaN NaN 99.982 0.56874 99.982 99.666 100.23 0 0 0 0 0.0034976 2 61269 61.958 42.687 1 NaN NaN 0 5817800 5817800 0 27767 370 10478 10766 43468;43469 43468 PGPGLSSQTAGAAGWR 16 0 1 Unmodified _PGPGLSSQTAGAAGWR_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.3881 2 756.881321 1511.74809 70697.88 0.58155 0.00044016 0.35008 0.00026497 0.93163 0.00070513 756.881837668361 761.885229909233 69.605 0.63707 69.605 69.27 69.907 0 102 43 4 0 0 0 0.027137 1 35712 25.194 21.77 1 0.52643 0.45382 0 1667400 957610 709780 27768 1552 10479 10767 43470 43470 PGPRPPAGELGSIGDHER 18 0 2 Unmodified _PGPRPPAGELGSIGDHER_ 0 0 1 P17676;W8SNV5;W8SNU6 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.2406 4 461.236779 1840.91801 87482.05 -0.13635 -6.2889E-05 -0.052171 -2.4063E-05 -0.18852 -8.6952E-05 461.487778275622 466.240671946098 49.226 0.4879 49.226 48.985 49.473 3.8147E-06 166 38 6 0 0 0 0.060987 1 23463 4.9784 4.9784 1 1.4124 1.2766 0 3017000 1434600 1582400 27769 1493 10480 10768 43471 43471 PGPTAESASGPSEDPSVNFLK 21 1 0 Unmodified _PGPTAESASGPSEDPSVNFLK_ 0 0 0 Q13501;B4E3V2;E7EMC7;E9PFW8;E3WH17 Q13501 Q13501 SQSTM1;SQSTM1-ALK Sequestosome-1;Tyrosine-protein kinase receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1048.0077 2 1044.00002 2085.98548 60529.09 0.54064 0.00056443 0.23732 0.00024776 0.77796 0.00081219 1043.99981073674 1048.00738759296 85.332 0.6553 85.332 85.081 85.737 0 302 53 8 0 0 0 3.5351E-38 3 51115 150.22 142.17 1 1.8986 1.9362 0 28146000 9065300 19081000 27770 1714 10481 10769 43472;43473;43474 43472 PGPTAESASGPSEDPSVNFLK 21 1 0 Unmodified _PGPTAESASGPSEDPSVNFLK_ 0 0 0 Q13501;B4E3V2;E7EMC7;E9PFW8;E3WH17 Q13501 Q13501 SQSTM1;SQSTM1-ALK Sequestosome-1;Tyrosine-protein kinase receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1044.5027 2 1044.00002 2085.98548 60815.01 0.44639 0.00046603 0.0067507 7.0477E-06 0.45314 0.00047308 1044.50169853831 1048.00715719321 84.599 0.66674 84.599 84.257 84.923 0 282 55 7 0 0 0 4.4806E-09 2 51809 85.554 80.849 1 1.8586 1.8718 0 27830000 9828000 18002000 27771 1714 10481 10769 43475;43476 43476 PGPTPSGTNVGSSGR 15 0 1 Unmodified _PGPTPSGTNVGSSGR_ 0 0 0 Q53FA5;P60468 Q53FA5 Q53FA5 SEC61B Protein transport protein Sec61 subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3422 2 685.836579 1369.65861 72051.29 0.7089 0.00048619 0.42093 0.00028869 1.1298 0.00077488 685.837685377992 690.840515246669 21.705 0.28238 21.705 21.501 21.784 0 57 16 5 0 0 0 0.001508 1 7836 47.559 37.327 1 2.0598 2.0982 0 7001500 2427200 4574300 27772 1623 10482 10770 43477 43477 PGPTPSGTNVGSSGR 15 0 1 Unmodified _PGPTPSGTNVGSSGR_ 0 0 0 Q53FA5;P60468 Q53FA5 Q53FA5 SEC61B Protein transport protein Sec61 subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.8407 2 685.836579 1369.65861 73488.38 0.32703 0.00022429 -0.13131 -9.0056E-05 0.19572 0.00013423 685.837099781353 690.840145203108 21.51 0.28794 21.51 21.408 21.696 0 43 13 6 0 0 0 5.8712E-06 2 7649 96.103 86.149 1 1.5001 1.4934 0 8001400 3621200 4380100 27773 1623 10482 10770 43478;43479 43479 PGPYDRPGTAR 11 0 2 Unmodified _PGPYDRPGTAR_ 0 0 1 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 396.2034 3 396.203633 1185.58907 93359.76 -0.11946 -4.7329E-05 0.09253 3.6661E-05 -0.026927 -1.0669E-05 396.203618668311 402.87576641304 17.442 0.50133 17.442 17.307 17.808 0 70 18 7 0 0 0 9.5492E-09 1 4601 104.79 79.358 1 1.5233 1.6497 0 23830000 9267500 14562000 27774 234 10483 10771 43480 43480 PGPYDRPGTAR 11 0 2 Unmodified _PGPYDRPGTAR_ 0 0 1 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.8091 2 593.801811 1185.58907 NaN NaN NaN -0.34699 -0.00020604 NaN NaN NaN NaN 17.461 0.27324 17.461 17.344 17.617 0 0 0 0 0.032515 1 4603 73.985 51.899 1 NaN NaN 0 7550500 0 7550500 27775 234 10483 10771 43481 43481 PGPYDRPGTAR 11 0 2 Unmodified _PGPYDRPGTAR_ 0 0 1 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 396.2037 3 396.203633 1185.58907 94995.45 -0.19016 -7.5341E-05 0.031009 1.2286E-05 -0.15915 -6.3055E-05 396.203888226082 402.875728059085 17.362 0.65617 17.362 17.209 17.865 0 79 23 8 0 0 0 0.00018894 1 4324 65.842 49.464 1 1.3563 1.5336 0 30687000 13380000 17307000 27776 234 10483 10771 43482 43482 PGQPLFLDSISPK 13 1 0 Unmodified _PGQPLFLDSISPK_ 0 0 0 Q2TB10;B7Z4V7;Q49A13 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.895 2 699.88501 1397.75547 74656.79 0.67438 0.00047199 -0.99755 -0.00069817 -0.32317 -0.00022618 700.382289340662 703.89223360996 101.51 0.44736 101.51 101.39 101.84 0 60 33 5 0 0 0 0.00015821 1 62451 72.531 62.008 1 1.1979 1.2075 0 5418400 2232100 3186300 27777 1777 10484 10772 43483 43483 PGQPLFLDSISPK 13 1 0 Unmodified _PGQPLFLDSISPK_ 0 0 0 Q2TB10;B7Z4V7;Q49A13 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 703.895 2 699.88501 1397.75547 75816.3 1.1077 0.00077526 0.11363 7.9525E-05 1.2213 0.00085479 699.884746913694 703.892263931651 113.79 0.44623 113.79 113.56 114 0 73 20 5 0 0 0 0.0066862 1 66301 45.915 38.27 1 1.8557 1.5646 0 2113600 835270 1278400 27778 1777 10484 10772 43484 43484 PGQPLFLDSISPK 13 1 0 Unmodified _PGQPLFLDSISPK_ 0 0 0 Q2TB10;B7Z4V7;Q49A13 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.3951 2 699.88501 1397.75547 76547.28 0.64279 0.00044988 0.054901 3.8424E-05 0.69769 0.0004883 700.386640001454 704.3937768663 113.58 0.4595 113.58 113.35 113.81 -7.6294E-06 78 21 5 0 0 0 0.014975 1 65264 36.847 26.323 1 2.4942 1.964 0 2035100 632000 1403100 27779 1777 10484 10772 43485 43485 PGSDTIKPDVQK 12 2 0 Unmodified _PGSDTIKPDVQK_ 0 0 1 Q06830;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.8576 2 642.843342 1283.67213 75756.38 0.73145 0.00047021 -0.025038 -1.6096E-05 0.70642 0.00045412 642.843314112906 650.857422799216 22.206 0.30951 22.206 22.04 22.35 0 50 17 5 0 0 0 1.073E-59 1 8286 210.87 145.52 1 3.8245 4.5527 0 22588000 5039600 17549000 27780 1690 10485 10773 43486 43486 PGSDTIKPDVQK 12 2 0 Unmodified _PGSDTIKPDVQK_ 0 0 1 Q06830;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.2408 3 428.897987 1283.67213 91054.81 -0.046937 -2.0131E-05 0.34816 0.00014932 0.30122 0.00012919 428.898052742596 434.240929593569 22.171 0.35545 22.171 22.04 22.396 0 92 20 7 0 0 0 9.7682E-05 2 8334 66.953 59.306 1 2.9874 3.5274 0 36390000 8889900 27500000 27781 1690 10485 10773 43487;43488 43487 PGSDTIKPDVQK 12 2 0 Unmodified _PGSDTIKPDVQK_ 0 0 1 Q06830;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.8577 2 642.843342 1283.67213 75758.11 0.2299 0.00014779 0.17694 0.00011374 0.40684 0.00026153 642.843583637422 650.857552147874 22.011 0.35097 22.011 21.866 22.217 -1.9073E-06 52 15 7 0 0 0 6.2217E-73 1 8047 219.03 174.72 1 3.75 4.3377 0 39582000 7382600 32199000 27782 1690 10485 10773 43489 43489 PGSDTIKPDVQK 12 2 0 Unmodified _PGSDTIKPDVQK_ 0 0 1 Q06830;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 428.8977 3 428.897987 1283.67213 92812.65 -0.50455 -0.0002164 0.95799 0.00041088 0.45345 0.00019448 428.898266193744 434.241258481886 22.013 0.39665 22.013 21.866 22.263 0 66 17 8 0 0 0 1.2864E-05 1 8077 80.245 69.009 1 3.4998 4.0557 0 62494000 13334000 49159000 27783 1690 10485 10773 43490 43490 PGSIDSNNQLFAPGGR 16 0 1 Unmodified _PGSIDSNNQLFAPGGR_ 0 0 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;Q96I65 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.4069 2 815.402618 1628.79068 68696.27 0.71351 0.00058179 -0.0022006 -1.7943E-06 0.7113 0.00058 815.90440616539 820.406373870468 69.228 0.44857 69.228 69.028 69.477 0 148 37 5 0 0 0 5.3533E-81 2 40205 204.85 204.85 1 2.0775 2.1627 0 21842000 7420100 14422000 27784 896 10486 10774 43491;43492 43492 PGSIDSNNQLFAPGGR 16 0 1 Unmodified _PGSIDSNNQLFAPGGR_ 0 0 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;Q96I65 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.4078 2 815.402618 1628.79068 67787.91 0.59159 0.00048239 -0.55363 -0.00045143 0.037962 3.0954E-05 815.904181747167 820.406521106438 79.364 0.41756 79.364 79.208 79.625 0 73 25 5 0 0 0 0.026837 1 41860 25.342 22.722 1 1.928 1.682 0 1277700 496650 781060 27785 896 10486 10774 43493 43493 PGSLLLCEGPCCGAFHLACLGLSR 24 0 1 Unmodified _PGSLLLCEGPCCGAFHLACLGLSR_ 0 0 0 O96028;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 886.0916 3 882.420023 2644.23824 64893.93 0.56405 0.00049773 0.4154 0.00036656 0.97945 0.00086429 882.754915465223 886.090664790658 128.99 0.37068 128.99 128.75 129.12 0 38 13 4 0 0 0 0.052817 1 77070 9.4587 1.9255 1 1.3922 1.1573 0 7569000 3302400 4266600 27786 1435 10487 10775 43494 43494 PGSNQGRPDGSLGGTAPLIFPDSK 24 1 1 Unmodified _PGSNQGRPDGSLGGTAPLIFPDSK_ 0 0 1 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.0687 3 790.067906 2367.18189 NaN NaN NaN 0.1289 0.00010184 NaN NaN NaN NaN 87.887 0.1778 87.887 87.751 87.929 7.6294E-06 0 0 0 0.0068865 1 53000 33.757 26.48 1 NaN NaN 0 7859100 7859100 0 27787 2100 10488 10776 43495 43495 PGSNQGRPDGSLGGTAPLIFPDSK 24 1 1 Unmodified _PGSNQGRPDGSLGGTAPLIFPDSK_ 0 0 1 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.4088 3 790.067906 2367.18189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.771 1 86.771 86.271 87.271 -7.6294E-06 0 0 0 3.9791E-05 1 53488 56.303 42.431 1 27788 2100 10488 10776 43496 43496 PGSVPLVSEK 10 1 0 Unmodified _PGSVPLVSEK_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.7946 2 506.787307 1011.56006 85841.75 0.55043 0.00027895 0.011406 5.7804E-06 0.56184 0.00028473 506.787196815421 510.794368935284 47.587 0.81986 47.587 47.184 48.003 3.8147E-06 283 72 7 0 0 0 6.0556E-08 2 25708 113.71 90.635 1 1.141 1.2867 0 112480000 59265000 53212000 27789 402 10489 10777 43497;43498 43497 PGSVPLVSEK 10 1 0 Unmodified _PGSVPLVSEK_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.7946 2 506.787307 1011.56006 84994.56 0.49797 0.00025237 0.24967 0.00012653 0.74764 0.00037889 506.787277333906 510.794363338836 46.605 0.77886 46.605 46.147 46.926 -3.8147E-06 274 62 7 0 0 0 1.5827E-09 2 25614 131.22 92.262 1 1.0595 1.2076 0 150950000 79245000 71708000 27790 402 10489 10777 43499;43500 43499 PGSVPLVSEK 10 1 0 Unmodified _PGSVPLVSEK_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.7946 2 506.787307 1011.56006 85227.42 0.46839 0.00023738 0.1893 9.5937E-05 0.6577 0.00033331 506.787044578109 510.794230703745 54.285 0.8965 54.285 53.878 54.774 3.8147E-06 342 68 8 0 0 0 0.00038013 2 26951 88.177 64.409 1 1.6315 1.3033 0 9120500 3448700 5671800 27791 402 10489 10777 43501;43502 43501 PGSVPLVSEK 10 1 0 Unmodified _PGSVPLVSEK_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.7875 2 506.787307 1011.56006 NaN NaN NaN -0.24045 -0.00012186 NaN NaN NaN NaN 54.572 0.80581 54.572 54.271 55.077 0 0 0 0 0.0095327 1 26588 63.816 44.722 1 NaN NaN 0 2997800 2997800 0 27792 402 10489 10777 43503 43503 PGSVPLVSEK 10 1 0 Unmodified _PGSVPLVSEK_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.794 2 506.787307 1011.56006 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.45 1 54.45 53.95 54.95 0 0 0 0 0.008747 1 26565 59.153 33.594 1 27793 402 10489 10777 43504 43504 PGTDVIPAAPR 11 0 1 Unmodified _PGTDVIPAAPR_ 0 0 0 Q4VC44;I3L0R3;I3L231 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.3078 2 547.303655 1092.59276 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.08 1 55.08 54.58 55.58 0 0 0 0 4.0538E-07 1 30974 106.68 83.943 1 27794 1781 10490 10778 43505 43505 PGTDVIPAAPR 11 0 1 Unmodified _PGTDVIPAAPR_ 0 0 0 Q4VC44;I3L0R3;I3L231 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.308 2 547.303655 1092.59276 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.094 1 55.094 54.594 55.594 0 0 0 0 1.2194E-06 1 30982 104.2 80.769 1 27795 1781 10490 10778 43506 43506 PGTDVIPAAPR 11 0 1 Unmodified _PGTDVIPAAPR_ 0 0 0 Q4VC44;I3L0R3;I3L231 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3037 2 547.303655 1092.59276 NaN NaN NaN -0.75519 -0.00041332 NaN NaN NaN NaN 54.167 0.35758 54.167 54.002 54.36 0 0 0 0 0.0061148 1 30959 64.04 43.415 1 NaN NaN 0 7455400 7455400 0 27796 1781 10490 10778 43507 43507 PGTDVIPAAPR 11 0 1 Unmodified _PGTDVIPAAPR_ 0 0 0 Q4VC44;I3L0R3;I3L231 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.3085 2 547.303655 1092.59276 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.153 1 54.153 53.653 54.653 3.8147E-06 0 0 0 3.7956E-06 1 30941 96.331 74.481 1 27797 1781 10490 10778 43508 43508 PGTTGSGAGSGGPGGLTSAAPAGGDK 26 1 0 Unmodified _PGTTGSGAGSGGPGGLTSAAPAGGDK_ 0 0 0 P67809;Q6PKI6;C9J5V9;Q15905 P67809 P67809 YBX1;YB-1 Nuclease-sensitive element-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1047.0024 2 1042.9958 2083.97704 60889.56 0.66507 0.00069367 -0.06293 -6.5636E-05 0.60214 0.00062803 1043.49728150564 1047.00285481027 40.988 0.35577 40.988 40.815 41.171 0 90 29 6 0 0 0 1.3233E-45 2 21475 141.13 138.26 1 2.464 2.5128 0 10417000 2686700 7730100 27798 1657 10491 10779 43509;43510 43509 PGTTGSGAGSGGPGGLTSAAPAGGDK 26 1 0 Unmodified _PGTTGSGAGSGGPGGLTSAAPAGGDK_ 0 0 0 P67809;Q6PKI6;C9J5V9;Q15905 P67809 P67809 YBX1;YB-1 Nuclease-sensitive element-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1047.5044 2 1042.9958 2083.97704 NaN NaN NaN 0.019125 1.9947E-05 NaN NaN NaN NaN 40.149 0.31266 40.149 39.993 40.305 0 0 0 0 0.00087938 1 21318 40.962 32.233 1 NaN NaN 0 9551500 0 9551500 27799 1657 10491 10779 43511 43511 PGTVALR 7 0 1 Unmodified _PGTVALR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.2191 2 357.218863 712.423173 99930.76 0.41941 0.00014982 0.41189 0.00014713 0.8313 0.00029695 357.218832141135 362.223103930285 26.126 0.61583 26.126 25.923 26.539 1.9073E-06 163 35 7 0 0 0 0.010096 2 11608 119.22 27.031 1 0.9205 1.0769 0 206550000 102180000 104370000 27800 827;1661;1865;1828 10492 10780 43512;43513 43512 PGTVALR 7 0 1 Unmodified _PGTVALR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 357.2188 2 357.218863 712.423173 101584.3 0.1884 6.7302E-05 -0.039221 -1.4011E-05 0.14918 5.3291E-05 357.218649302945 362.222972236763 25.819 0.66625 25.819 25.49 26.157 0 132 39 6 0 0 0 0.016076 1 11363 98.415 20.666 1 1.0069 1.1455 0 115810000 61379000 54427000 27801 827;1661;1865;1828 10492 10780 43514 43514 PGVLLGFNMK 10 1 0 Oxidation (M) _PGVLLGFNM(ox)K_ PGVLLGFNM(1)K PGVLLGFNM(75.11)K 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.3007 2 546.299527 1090.5845 81341.91 0.51734 0.00028262 0.96282 0.00052599 1.4802 0.00080861 546.299819197524 550.307536824667 80.335 0.50421 80.335 80.15 80.654 0 124 41 4 0 0 0 0.00056549 1 49032 75.109 65.895 1 1.0303 1.0419 0 8859900 4925900 3934000 27802 878 10493 10781 43515 43515 689 PGVYAVSVTGR 11 0 1 Unmodified _PGVYAVSVTGR_ 0 0 0 D3DTZ5;J3QSB9;P63272 D3DTZ5 D3DTZ5 SUPT4H1 Transcription elongation factor SPT4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.3039 2 553.303655 1104.59276 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.383 1 55.383 54.883 55.883 0 0 0 0 0.0058682 1 31133 64.04 46.055 1 27803 1191 10494 10782 43516 43516 PGVYAVSVTGR 11 0 1 Unmodified _PGVYAVSVTGR_ 0 0 0 D3DTZ5;J3QSB9;P63272 D3DTZ5 D3DTZ5 SUPT4H1 Transcription elongation factor SPT4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.2873 2 553.303655 1104.59276 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.414 1 55.414 54.914 55.914 3.8147E-06 0 0 0 0.0066813 1 31150 63.076 39.552 1 27804 1191 10494 10782 43517 43517 PGVYVR 6 0 1 Unmodified _PGVYVR_ 0 0 0 CON__P06868;A0A0F7G8J1;B2R7F8;P00747;B4DPH4;Q68DS2 CON__P06868 CON__P06868 PLG;DKFZp779M0222 Plasminogen;Plasmin heavy chain A;Activation peptide;Angiostatin;Plasmin heavy chain A, short form;Plasmin light chain B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 345.7003 2 345.700306 689.38606 NaN NaN NaN 0.45254 0.00015644 NaN NaN NaN NaN 24.703 0.23703 24.703 24.594 24.831 0 0 0 0 0.052279 1 10438 67.29 43.655 1 NaN NaN 0 2765300 2765300 0 + 27805 1157 10495 10783 43518 43518 PHFNQLFK 8 1 0 Unmodified _PHFNQLFK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 346.8584 3 344.187143 1029.5396 105664.9 0.054066 1.8609E-05 -0.0057681 -1.9853E-06 0.048298 1.6623E-05 344.187092057505 346.858441057594 50.075 0.64492 50.075 49.69 50.335 0 174 57 5 0 0 0 0.036566 1 28291 24.923 13.154 1 2.268 2.351 0 18760000 3928200 14832000 27806 1010 10496 10784 43519 43519 PHLGHVPDYLVPPALR 16 0 1 Unmodified _PHLGHVPDYLVPPALR_ 0 0 0 Q9NY93;Q53HB9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.6688 3 594.333418 1779.97842 80743.19 0.69768 0.00041465 0.66214 0.00039353 1.3598 0.00080819 594.667803697278 598.003951971144 108.48 0.60049 108.48 108.13 108.73 7.6294E-06 123 29 7 0 0 0 0.026806 2 62197 20.439 20.439 1 1.2901 1.0786 0 3547900 1602300 1945600 27807 2081 10497 10785 43520;43521 43521 PHSVSLNDTETR 12 0 1 Unmodified _PHSVSLNDTETR_ 0 0 0 A8KA83;Q9P0L0 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.3355 2 678.33113 1354.64771 75188.74 0.28848 0.00019569 0.051489 3.4927E-05 0.33997 0.00023061 678.331251747126 683.335139338358 23.366 0.29599 23.366 23.211 23.507 0 38 13 4 0 0 0 0.00022519 2 9273 83.869 76.895 1 0.68182 0.71204 0 10601000 5061800 5539600 27808 791 10498 10786 43522;43523 43522 PHSVSLNDTETR 12 0 1 Unmodified _PHSVSLNDTETR_ 0 0 0 A8KA83;Q9P0L0 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.557 3 452.556512 1354.64771 88904.13 -0.2809 -0.00012712 0.76627 0.00034678 0.48537 0.00021966 452.556778538679 455.892871418197 22.948 0.36299 22.948 22.77 23.133 1.9073E-06 67 15 8 0 0 0 0.00038104 2 8843 50.207 36.528 1 0.79566 0.84668 0 24310000 11220000 13089000 27809 791 10498 10786 43524;43525 43524 PHSVSLNDTETR 12 0 1 Unmodified _PHSVSLNDTETR_ 0 0 0 A8KA83;Q9P0L0 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 455.8926 3 452.556512 1354.64771 88677.43 0.066901 3.0276E-05 -0.148 -6.6978E-05 -0.081098 -3.6702E-05 452.556368889864 455.892609219173 25.657 0.26423 25.657 25.532 25.796 0 44 9 6 0 0 0 0.050107 2 8945 13.745 13.05 1 1.17 1.0133 0 1616500 643100 973420 27810 791 10498 10786 43526;43527 43527 PHSVSLNDTETRK 13 1 1 Unmodified _PHSVSLNDTETRK_ 0 0 1 A8KA83;Q9P0L0 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2552 3 495.254833 1482.74267 NaN NaN NaN 1.4302 0.00070833 NaN NaN NaN NaN 19.059 0.25894 19.059 18.941 19.2 0 0 0 0 0.02222 1 5794 35.891 18.813 1 NaN NaN 0 7306800 7306800 0 27811 791 10499 10787 43528 43528 PIEIQWVKPEPK 12 2 0 Unmodified _PIEIQWVKPEPK_ 0 0 1 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.6135 3 488.61341 1462.8184 85742.29 -0.0033422 -1.633E-06 0.040323 1.9702E-05 0.036981 1.8069E-05 488.61339044778 493.956167885204 77.223 0.76927 77.223 76.944 77.714 0 381 63 9 0 0 0 0.0028921 2 45548 40.066 35.217 1 0.73323 0.86533 0 108230000 58706000 49525000 27812 1934 10500 10788 43529;43530 43530 PIEIQWVKPEPK 12 2 0 Unmodified _PIEIQWVKPEPK_ 0 0 1 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.6133 3 488.61341 1462.8184 85931.96 0.063526 3.1039E-05 0.12669 6.1901E-05 0.19021 9.294E-05 488.613456575286 493.956208779044 75.931 0.65571 75.931 75.679 76.334 0 345 59 9 0 0 0 0.002177 2 45785 66.267 58.722 1 0.71497 0.83142 0 149550000 79697000 69857000 27813 1934 10500 10788 43531;43532 43532 PIEIQWVKPEPK 12 2 0 Unmodified _PIEIQWVKPEPK_ 0 0 1 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.6129 3 488.61341 1462.8184 85593.52 0.20013 9.7784E-05 -0.02831 -1.3832E-05 0.17182 8.3951E-05 488.61334548334 493.956177808277 88.034 0.92197 88.034 87.756 88.678 0 252 52 8 0 0 0 0.0086985 2 47631 39.006 39.006 1 1.4598 1.2341 0 11970000 5033700 6935900 27814 1934 10500 10788 43533;43534 43534 PIELTPLPLLK 11 1 0 Unmodified _PIELTPLPLLK_ 0 0 0 Q86XZ2;Q58EX4;B7Z5X1;Q562F2;Q59EK0;Q16537 Q86XZ2 Q86XZ2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.402 2 617.394482 1232.77441 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.37 1 122.37 121.87 122.87 7.6294E-06 0 0 0 0.0038503 1 79222 66.435 35.864 1 27815 1098 10501 10789 43535 43535 PIEVQVGGR 9 0 1 Unmodified _PIEVQVGGR_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.7725 2 477.771991 953.529429 84803.08 0.18192 8.6917E-05 1.1868 0.00056702 1.3687 0.00065393 477.772763828585 482.776601829153 40.719 0.28062 40.719 40.618 40.899 0 54 18 4 0 0 0 0.0015079 1 21804 84.498 43.271 1 1.0939 1.2619 0 71581000 33373000 38208000 27816 511 10502 10790 43536 43536 PIEVQVGGR 9 0 1 Unmodified _PIEVQVGGR_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.7766 2 477.771991 953.529429 89136.23 -0.01024 -4.8923E-06 0.4227 0.00020195 0.41246 0.00019706 477.772233888203 482.77640088944 47.442 0.40529 47.442 47.309 47.714 -3.8147E-06 83 29 4 0 0 0 0.055495 1 22452 36.557 30.454 1 0.53957 0.47039 0 1478200 769860 708370 27817 511 10502 10790 43537 43537 PIFGGTVYHSPVSR 14 0 1 Unmodified _PIFGGTVYHSPVSR_ 0 0 0 A0A024RC67;O43663;G3V3N7;H0YNE4 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.9396 3 506.268414 1515.78341 86879.63 0.28466 0.00014411 0.015106 7.6475E-06 0.29976 0.00015176 506.268388267029 509.604696857657 66.722 0.54356 66.722 66.465 67.009 -7.6294E-06 152 40 5 0 0 0 0.0091683 1 38447 29.981 29.981 1 0.58954 0.61502 0 10542000 6815800 3726700 27818 353 10503 10791 43538 43538 PIFGGTVYHSPVSR 14 0 1 Unmodified _PIFGGTVYHSPVSR_ 0 0 0 A0A024RC67;O43663;G3V3N7;H0YNE4 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.2679 3 506.268414 1515.78341 88085.78 0.19754 0.00010001 -0.18779 -9.5075E-05 0.0097428 4.9325E-06 506.268340425876 509.604607944329 64.865 0.67313 64.865 64.59 65.264 0 195 55 7 0 0 0 0.0026314 1 38158 38.511 38.511 1 0.74976 0.74167 0 15301000 9681100 5619900 27819 353 10503 10791 43539 43539 PIFTDESYLELYR 13 0 1 Unmodified _PIFTDESYLELYR_ 0 0 0 Q01780;B4DKG8;B4DFE4 Q01780 Q01780 EXOSC10 Exosome component 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.4144 2 823.409046 1644.80354 NaN NaN NaN 2.2765 0.0018745 NaN NaN NaN NaN 112.22 0.49762 112.22 111.98 112.47 0 0 0 0 0.00058888 1 72574 81.625 40.342 1 NaN NaN 0 7674000 7674000 0 27820 1676 10504 10792 43540 43540 PIFTDESYLELYR 13 0 1 Unmodified _PIFTDESYLELYR_ 0 0 0 Q01780;B4DKG8;B4DFE4 Q01780 Q01780 EXOSC10 Exosome component 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.4146 2 823.409046 1644.80354 NaN NaN NaN 0.78797 0.00064883 NaN NaN NaN NaN 112.24 0.39734 112.24 112.02 112.41 0 0 0 0 0.00024023 1 72598 88.596 54.064 1 NaN NaN 0 4481200 0 4481200 27821 1676 10504 10792 43541 43541 PIFTDESYLELYR 13 0 1 Unmodified _PIFTDESYLELYR_ 0 0 0 Q01780;B4DKG8;B4DFE4 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 828.4133 2 823.409046 1644.80354 67913.19 0.99366 0.00081819 0.17676 0.00014554 1.1704 0.00096373 823.910062767004 828.413512236378 123.74 0.63405 123.74 123.46 124.1 -7.6294E-06 122 26 9 0 0 0 0.00036536 2 74024 62.466 62.466 1 1.0899 0.92799 0 5447300 2566500 2880800 27822 1676 10504 10792 43542;43543 43542 PIFTDESYLELYR 13 0 1 Unmodified _PIFTDESYLELYR_ 0 0 0 Q01780;B4DKG8;B4DFE4 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 823.4095 2 823.409046 1644.80354 68044.26 0.9353 0.00077013 0.44454 0.00036604 1.3798 0.0011362 823.408586014386 828.41420594927 123.59 0.60081 123.59 123.33 123.93 -7.6294E-06 116 23 8 0 0 0 0.00013561 2 73055 80.834 80.834 1 1.0615 0.889 0 4894100 2590100 2303900 27823 1676 10504 10792 43544;43545 43545 PIFTLNAHNDEISGLDLSSQIK 22 1 0 Unmodified _PIFTLNAHNDEISGLDLSSQIK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.4241 3 804.751694 2411.23325 65621.13 1.3923 0.0011205 -0.43826 -0.00035269 0.95407 0.00076779 805.086797798031 807.75732034475 111.53 0.31892 111.53 111.47 111.79 -7.6294E-06 50 22 6 0 0 0 0.031253 1 70402 22.996 8.9803 1 1.02 1.1004 0 41698000 18422000 23276000 27824 339 10505 10793 43546 43546 PIFTLNAHNDEISGLDLSSQIK 22 1 0 Unmodified _PIFTLNAHNDEISGLDLSSQIK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.7578 3 804.751694 2411.23325 67488.95 0.68911 0.00055456 -0.0933 -7.5083E-05 0.59581 0.00047948 805.08613458646 807.757807316186 111.04 0.3678 111.04 110.84 111.21 0 130 27 7 0 0 0 2.5505E-08 1 71645 62.847 52.499 1 0.9937 1.024 0 25152000 13526000 11626000 27825 339 10505 10793 43547 43547 PIKPSPPYFGLLLASVGR 18 1 1 Unmodified _PIKPSPPYFGLLLASVGR_ 0 0 1 P17812;B4E1E0 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.0471 3 638.040011 1911.0982 79772.23 0.67237 0.000429 -0.11333 -7.2308E-05 0.55904 0.00035669 638.040080123434 644.047516659971 121.82 0.47928 121.82 121.5 121.98 0 150 34 7 0 0 0 0.00042478 1 80620 39.203 30.813 1 2.4216 2.664 0 5781000 2054300 3726700 27826 1494 10506 10794 43548 43548 PIKPSPPYFGLLLASVGR 18 1 1 Unmodified _PIKPSPPYFGLLLASVGR_ 0 0 1 P17812;B4E1E0 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.0408 3 638.040011 1911.0982 77683.58 1.213 0.00077397 -0.67455 -0.00043039 0.53848 0.00034357 638.03956275966 644.715449932569 134.27 0.22639 134.27 134.14 134.37 0 36 10 6 0 0 0 0.004316 1 81928 29.892 21.398 1 1.1566 0.95974 0 3766000 1236900 2529100 27827 1494 10506 10794 43549 43549 PIKPSPPYFGLLLASVGR 18 1 1 Unmodified _PIKPSPPYFGLLLASVGR_ 0 0 1 P17812;B4E1E0 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.0407 3 638.040011 1911.0982 80079.22 1.2345 0.00078769 -1.0316 -0.00065821 0.20293 0.00012948 638.373833692498 644.0468389184 134.12 0.16983 134.12 134.02 134.19 0 37 9 5 0 0 0 0.044172 1 80889 18.296 16.967 1 1.3515 1.1554 0 2817300 1014500 1802700 27828 1494 10506 10794 43550 43550 PILDPVDFLGLQDK 14 1 0 Unmodified _PILDPVDFLGLQDK_ 0 0 0 B3KSQ6;A0A0A0MTN9;A0A0A0MTR6;B4DDI9;Q6GSK2;A0A0C4DFN8;A0A0C4DGN7;A0A0A0MSZ4;A0A0A0MT64;P22570 B3KSQ6 B3KSQ6 FDXR NADPH:adrenodoxin oxidoreductase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.4374 2 785.429781 1568.84501 74766.26 0.76338 0.00059958 0.25149 0.00019753 1.0149 0.00079711 785.430211523306 789.43677858225 129.78 0.27209 129.78 129.61 129.88 0 40 17 4 0 0 0 0.00022698 1 86696 65.5 65.5 1 1.1061 1.22 0 2865100 1491800 1373300 27829 484 10507 10795 43551 43551 PILQVINIRPITTGNSPPR 19 0 2 Unmodified _PILQVINIRPITTGNSPPR_ 0 0 1 P27694;I3L524;I3L2M5 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.7488 3 696.075896 2085.20586 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.41 1 104.41 103.91 104.91 0 0 0 0 0.017538 1 64517 38.017 14.689 1 27830 1525 10508 10796 43552 43552 PILQVINIRPITTGNSPPR 19 0 2 Unmodified _PILQVINIRPITTGNSPPR_ 0 0 1 P27694;I3L524;I3L2M5 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.4118 3 696.075896 2085.20586 72658.05 0.26447 0.00018409 0.40171 0.00027962 0.66618 0.00046371 696.410402447582 702.748407167534 103.44 0.64257 103.44 103.17 103.82 0 271 53 7 0 0 0 1.4527E-05 2 65395 55.437 55.437 1 0.59712 0.6807 0 40840000 22132000 18708000 27831 1525 10508 10796 43553;43554 43553 PILQVINIRPITTGNSPPR 19 0 2 Unmodified _PILQVINIRPITTGNSPPR_ 0 0 1 P27694;I3L524;I3L2M5 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.4102 3 696.075896 2085.20586 73032.9 1.0143 0.00070604 0.46258 0.00032199 1.4769 0.001028 696.076323850395 703.082635411133 115.7 0.4049 115.7 115.55 115.95 -7.6294E-06 95 17 8 0 0 0 0.022411 1 67808 21.309 21.309 1 0.35128 0.29792 0 8544700 6058000 2486600 27832 1525 10508 10796 43555 43555 PILQVINIRPITTGNSPPR 19 0 2 Unmodified _PILQVINIRPITTGNSPPR_ 0 0 1 P27694;I3L524;I3L2M5 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.075 3 696.075896 2085.20586 73391.35 0.66907 0.00046572 0.10218 7.1128E-05 0.77126 0.00053685 696.410013680547 703.083036418457 115.44 0.41652 115.44 115.26 115.68 0 94 19 7 0 0 0 0.0069806 1 66650 24.011 24.011 1 0.27674 0.25311 0 9597000 7316800 2280200 27833 1525 10508 10796 43556 43556 PINFSVILK 9 1 0 Unmodified _PINFSVILK_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;B4DY21 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.826 2 515.81841 1029.62227 87045.85 0.86882 0.00044815 1.4033 0.00072385 2.2721 0.001172 515.818982918362 519.82632617754 108.71 0.62801 108.71 108.57 109.2 0 149 39 6 0 0 0 0.0063471 2 67902 64.42 32.485 1 1.0799 1.1708 0 44676000 21416000 23260000 27834 2139 10509 10797 43557;43558 43557 PINFSVILK 9 1 0 Unmodified _PINFSVILK_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;B4DY21 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.819 2 515.81841 1029.62227 87573.26 0.3094 0.00015959 0.98859 0.00050993 1.298 0.00066953 515.818778071906 519.826226882174 120.38 0.46387 120.38 120.16 120.62 0 95 20 6 0 0 0 0.018227 2 71368 52.255 24.495 1 1.0099 0.80592 0 6896500 3564200 3332300 27835 2139 10509 10797 43559;43560 43559 PINFSVILK 9 1 0 Unmodified _PINFSVILK_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;B4DY21 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.8264 2 515.81841 1029.62227 86186.98 0.55317 0.00028533 1.1122 0.00057369 1.6654 0.00085902 515.818891113051 519.826292288478 120.13 0.44536 120.13 119.89 120.34 0 92 19 6 0 0 0 0.007781 1 70363 61.679 26.871 1 0.96829 0.7899 0 5987500 3157600 2829900 27836 2139 10509 10797 43561 43561 PINGAIFIFNPR 12 0 1 Unmodified _PINGAIFIFNPR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.8881 2 679.882604 1357.75066 74780.56 0.76257 0.00051846 0.76718 0.00052159 1.5297 0.00104 679.882687850007 684.887831607812 114.08 0.66564 114.08 113.76 114.42 0 202 48 6 0 0 0 2.6765E-05 3 72378 100.25 100.25 1 0.88284 0.9047 0 14438000 8196000 6241700 27837 1854 10510 10798 43562;43563;43564 43564 PINGAIFIFNPR 12 0 1 Unmodified _PINGAIFIFNPR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.3842 2 679.882604 1357.75066 74603.02 0.63804 0.0004338 0.57759 0.0003927 1.2156 0.00082649 679.882660864252 684.887668806725 113.42 0.63811 113.42 113.09 113.73 0 189 44 6 0 0 0 0.00081067 1 73495 65.465 65.465 1 0.79476 0.78895 0 11944000 6083000 5861400 27838 1854 10510 10798 43565 43565 PINGAIFIFNPR 12 0 1 Unmodified _PINGAIFIFNPR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.3846 2 679.882604 1357.75066 75879.3 0.7634 0.00051902 0.34656 0.00023562 1.11 0.00075464 679.882887844591 685.388683884737 125.33 0.58147 125.33 125.11 125.69 7.6294E-06 71 21 6 0 0 0 0.0002174 1 75198 82.287 82.287 1 0.70867 0.61159 0 2640800 1295600 1345300 27839 1854 10510 10798 43566 43566 PINGAIFIFNPR 12 0 1 Unmodified _PINGAIFIFNPR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.8831 2 679.882604 1357.75066 75418.67 0.80265 0.0005457 0.40258 0.00027371 1.2052 0.00081942 679.882797369112 684.886864517234 125.14 0.48308 125.14 124.89 125.38 0 77 20 5 0 0 0 0.0009625 1 74121 63.216 63.216 1 0.72683 0.62024 0 3220000 1588700 1631300 27840 1854 10510 10798 43567 43567 PIPILAAGFCSDK 13 1 0 Unmodified _PIPILAAGFCSDK_ 0 0 0 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.8753 2 694.865763 1387.71697 NaN NaN NaN 0.88387 0.00061417 NaN NaN NaN NaN 107.18 0.52974 107.18 106.9 107.43 0 0 0 0 0.0044591 2 66601 61.353 33.611 1 NaN NaN 0 11019000 0 11019000 27841 1752 10511 10799 43568;43569 43569 PIPILAAGFCSDK 13 1 0 Unmodified _PIPILAAGFCSDK_ 0 0 0 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.8662 2 694.865763 1387.71697 73095.59 0.93338 0.00064858 0.40303 0.00028005 1.3364 0.00092863 695.367269434312 698.873337219183 106.54 0.63796 106.54 106.19 106.83 0 246 48 7 0 0 0 8.0557E-06 2 67771 102.52 98.072 1 0.94292 1.0375 0 42616000 23428000 19188000 27842 1752 10511 10799 43570;43571 43571 PIPILAAGFCSDK 13 1 0 Unmodified _PIPILAAGFCSDK_ 0 0 0 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 698.8744 2 694.865763 1387.71697 71313.43 0.69409 0.0004823 0.45808 0.0003183 1.1522 0.00080061 694.866616108184 698.873203086749 118.45 0.79507 118.45 118.13 118.92 0 154 36 9 0 0 0 0.00057256 2 69822 61.353 61.353 1 1.3103 1.0168 0 14330000 6213600 8116600 27843 1752 10511 10799 43572;43573 43572 PIPILAAGFCSDK 13 1 0 Unmodified _PIPILAAGFCSDK_ 0 0 0 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.8726 2 694.865763 1387.71697 70978.8 0.58951 0.00040963 0.39586 0.00027507 0.98537 0.0006847 694.866350899732 698.873158917658 118.22 0.63415 118.22 117.91 118.54 0 153 28 8 0 0 0 0.00057256 2 68788 61.353 61.353 1 1.1573 0.9299 0 16173000 7454100 8718600 27844 1752 10511 10799 43574;43575 43575 PIPQTPESAGNK 12 1 0 Unmodified _PIPQTPESAGNK_ 0 0 0 P52948;A0A024RCC4;Q86TI1;B4DWF8;A8KA17 P52948 P52948 NUP98;NUP98/HOXC13 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.8235 2 619.822409 1237.63027 NaN NaN NaN 0.28168 0.00017459 NaN NaN NaN NaN 27.025 0.26556 27.025 26.876 27.141 -1.9073E-06 0 0 0 0.041011 1 12280 43.512 14.425 1 NaN NaN 0 4479700 4479700 0 27845 1603 10512 10800 43576 43576 PIPQTPESAGNK 12 1 0 Unmodified _PIPQTPESAGNK_ 0 0 0 P52948;A0A024RCC4;Q86TI1;B4DWF8;A8KA17 P52948 P52948 NUP98;NUP98/HOXC13 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.8295 2 619.822409 1237.63027 78985.48 0.48997 0.0003037 0.3937 0.00024403 0.88368 0.00054772 619.823188034986 623.82936930676 26.566 0.36774 26.566 26.418 26.786 -1.9073E-06 58 18 4 0 0 0 0.012218 1 12043 45.158 45.158 1 1.2495 1.3213 0 20157000 9112200 11045000 27846 1603 10512 10800 43577 43577 PIQLTDPGK 9 1 0 Unmodified _PIQLTDPGK_ 0 0 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.774 2 484.7742 967.533846 87087.23 0.33538 0.00016258 -0.14906 -7.2261E-05 0.18632 9.0323E-05 484.77411633241 488.781074891603 42.99 0.39578 42.99 42.783 43.179 0 126 30 6 0 0 0 6.7382E-06 2 22910 130.75 110.19 1 1.0376 1.1702 0 77143000 38209000 38934000 27847 2125 10513 10801 43578;43579 43579 PIQLTDPGK 9 1 0 Unmodified _PIQLTDPGK_ 0 0 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7755 2 484.7742 967.533846 86756.65 0.34075 0.00016518 0.60381 0.00029271 0.94456 0.0004579 484.774908355771 488.780995901207 41.997 0.81597 41.997 41.643 42.459 0 237 72 4 0 0 0 0.00026455 2 22529 104.2 85.415 1 1.1352 1.1797 0 33644000 14679000 18965000 27848 2125 10513 10801 43580;43581 43581 PIQLTDPGK 9 1 0 Unmodified _PIQLTDPGK_ 0 0 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.7815 2 484.7742 967.533846 89878.38 0.04388 2.1272E-05 0.4533 0.00021975 0.49718 0.00024102 484.774775947845 488.781233728293 48.992 1.0014 48.992 48.418 49.419 0 167 79 4 0 0 0 0.0043049 1 23912 69.598 69.598 1 1.6789 1.3939 0 2282800 885870 1397000 27849 2125 10513 10801 43582 43582 PIQLTDPGK 9 1 0 Unmodified _PIQLTDPGK_ 0 0 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.7813 2 484.7742 967.533846 NaN NaN NaN 0.072604 3.5196E-05 NaN NaN NaN NaN 49.312 0.89478 49.312 48.773 49.668 0 0 0 0 0.0057721 1 23486 73.665 68.006 1 NaN NaN 0 1093600 0 1093600 27850 2125 10513 10801 43583 43583 PIQLTDPGK 9 1 0 Unmodified _PIQLTDPGK_ 0 0 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.7747 2 484.7742 967.533846 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.254 1 49.254 48.754 49.754 0 0 0 0 0.051379 1 23487 46.129 17.91 1 27851 2125 10513 10801 43584 43584 PISIPTNLVSLFSR 14 0 1 Unmodified _PISIPTNLVSLFSR_ 0 0 0 B3KXN0;Q86TB9 B3KXN0 B3KXN0 PATL1 Protein PAT1 homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.4457 2 772.445766 1542.87698 72610.98 0.84184 0.00065028 0.81733 0.00063134 1.6592 0.0012816 772.446171541906 777.450782289683 133.09 0.38506 133.09 132.84 133.23 0 65 16 7 0 0 0 0.00078272 1 89222 58.37 58.37 1 1.0459 1.0525 0 6567100 2887800 3679300 27852 953 10514 10802 43585 43585 PISSFADFER 10 0 1 Unmodified _PISSFADFER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.7895 2 584.785296 1167.55604 79971.81 0.7922 0.00046327 0.14998 8.7707E-05 0.94218 0.00055097 584.785590348017 589.789332249915 79.834 0.56911 79.834 79.533 80.102 0 188 44 6 0 0 0 0.0012794 1 48534 74.376 62.14 1 0.78127 0.85467 0 34207000 18825000 15382000 27853 1745 10515 10803 43586 43586 PISSFADFER 10 0 1 Unmodified _PISSFADFER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.7856 2 584.785296 1167.55604 80967.39 0.5549 0.0003245 0.1345 7.8651E-05 0.6894 0.00040315 584.785181630168 589.78945436875 92.511 0.84691 92.511 91.984 92.831 7.6294E-06 191 44 9 0 0 0 0.0013651 2 51464 73.985 63.754 1 1.5115 1.2965 0 8444100 3224300 5219900 27854 1745 10515 10803 43587;43588 43587 PISSFADFER 10 0 1 Unmodified _PISSFADFER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.7886 2 584.785296 1167.55604 80421.39 0.30172 0.00017644 0.10292 6.0186E-05 0.40464 0.00023663 584.785108813176 589.789302216557 92.435 0.77513 92.435 91.971 92.746 0 162 41 8 0 0 0 0.020014 2 50585 46.819 46.819 1 1.4425 1.202 0 6886100 2790300 4095900 27855 1745 10515 10803 43589;43590 43590 PISTLDNR 8 0 1 Unmodified _PISTLDNR_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2478 2 458.248349 914.482145 88966.22 0.031574 1.4469E-05 0.67112 0.00030754 0.70269 0.00032201 458.24841147221 463.252561340947 26.663 0.44852 26.663 26.387 26.835 0 105 27 6 0 0 0 0.0048039 1 12077 92.47 30.006 1 1.2668 1.3751 0 50140000 24222000 25918000 27856 1535 10516 10804 43591 43591 PISTLDNR 8 0 1 Unmodified _PISTLDNR_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.2481 2 458.248349 914.482145 89960.38 -0.066146 -3.0311E-05 1.2695 0.00058173 1.2033 0.00055142 458.248721397759 463.252531597181 26.306 0.42145 26.306 26.063 26.485 0 101 22 7 0 0 0 0.012282 1 11740 67.981 19.42 1 0.9627 1.0995 0 50236000 26326000 23909000 27857 1535 10516 10804 43592 43592 PISTLDNR 8 0 1 Unmodified _PISTLDNR_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 458.2481 2 458.248349 914.482145 89245.94 0.095686 4.3848E-05 0.24541 0.00011246 0.34109 0.0001563 458.248385941409 463.252562410408 29.357 0.3279 29.357 29.193 29.521 0 84 20 6 0 0 0 0.038748 1 11923 47.849 11.453 1 0.66087 0.56267 0 5443800 3094500 2349200 27858 1535 10516 10804 43593 43593 PISTLDNR 8 0 1 Unmodified _PISTLDNR_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 458.2479 2 458.248349 914.482145 89441.55 -0.30535 -0.00013993 0.30433 0.00013946 -0.0010208 -4.6777E-07 458.248330773508 463.252854787854 29.412 0.37007 29.412 29.226 29.596 0 80 20 6 0 0 0 0.038748 1 11469 47.849 11.453 1 0.63235 0.55899 0 2431800 1513500 918330 27859 1535 10516 10804 43594 43594 PIVLELIPLK 10 1 0 Unmodified _PIVLELIPLK_ 0 0 0 A0A0E3JSF1;A0A0E3JG40 A0A0E3JSF1 A0A0E3JSF1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.8791 2 567.878468 1133.74238 NaN NaN NaN -0.1572 -8.9273E-05 NaN NaN NaN NaN 125.54 0.24605 125.54 125.42 125.67 0 0 0 0 0.0025843 1 81626 79.906 76.067 1 NaN NaN 0 939710 939710 0 27860 530 10517 10805 43595 43595 PIVLELIPLK 10 1 0 Unmodified _PIVLELIPLK_ 0 0 0 A0A0E3JSF1;A0A0E3JG40 A0A0E3JSF1 A0A0E3JSF1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.8856 2 567.878468 1133.74238 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.56 1 125.56 125.06 126.06 0 0 0 0 0.00069073 1 81636 69.825 60.962 1 27861 530 10517 10805 43596 43596 PIVLELIPLK 10 1 0 Unmodified _PIVLELIPLK_ 0 0 0 A0A0E3JSF1;A0A0E3JG40 A0A0E3JSF1 A0A0E3JSF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.8787 2 567.878468 1133.74238 84158.41 1.2331 0.00070028 -0.39684 -0.00022536 0.8363 0.00047492 567.877944337891 571.885275383395 125 0.40936 125 124.8 125.21 7.6294E-06 68 29 4 0 0 0 0.0026273 2 83279 68.224 61.911 1 0.91779 1.0129 0 2635800 1379200 1256700 27862 530 10517 10805 43597;43598 43598 PIVYGNVAR 9 0 1 Unmodified _PIVYGNVAR_ 0 0 0 O95619;F8W0J4;F8W1B9 O95619 O95619 YEATS4 YEATS domain-containing protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.7815 2 494.782359 987.550165 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.964 1 42.964 42.464 43.464 0 0 0 0 0.052654 1 22925 45.718 12.877 1 27863 1430 10518 10806 43599 43599 PIVYGNVAR 9 0 1 Unmodified _PIVYGNVAR_ 0 0 0 O95619;F8W0J4;F8W1B9 O95619 O95619 YEATS4 YEATS domain-containing protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7815 2 494.782359 987.550165 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.209 1 42.209 41.709 42.709 0 0 0 0 0.052654 1 22732 45.718 12.877 1 27864 1430 10518 10806 43600 43600 PKPENQDESELLTVPDGWK 19 2 0 Unmodified _PKPENQDESELLTVPDGWK_ 0 0 1 Q13601;B4DMS5 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.7053 3 728.026936 2181.05898 NaN NaN NaN 0.060499 4.4045E-05 NaN NaN NaN NaN 89.343 0.3504 89.343 89.23 89.581 0 0 0 0 0.051904 1 55242 29.126 24.022 1 NaN NaN 0 14619000 0 14619000 27865 1717 10519 10807 43601 43601 PLDGEWGTNPR 11 0 1 Unmodified _PLDGEWGTNPR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.3033 2 621.299101 1240.58365 77857.81 0.79348 0.00049299 0.25562 0.00015882 1.0491 0.0006518 621.299186700591 626.303262783328 50.037 0.56083 50.037 49.718 50.279 0 176 49 6 0 0 0 4.1815E-05 1 27444 99.653 94.869 1 0.72331 0.73355 0 28703000 16836000 11867000 27866 1942 10520 10808 43602 43602 PLDGEWGTNPR 11 0 1 Unmodified _PLDGEWGTNPR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.3034 2 621.299101 1240.58365 78020.41 0.52773 0.00032788 0.27733 0.0001723 0.80506 0.00050018 621.800766347754 626.303356106991 48.814 0.73949 48.814 48.406 49.145 3.8147E-06 200 57 5 0 0 0 0.00010563 3 27219 96.89 92.106 1 0.71684 0.77361 0 26379000 16484000 9895600 27867 1942 10520 10808 43603;43604;43605 43604 PLDGEWGTNPR 11 0 1 Unmodified _PLDGEWGTNPR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.3011 2 621.299101 1240.58365 79033.69 0.59676 0.00037076 0.21232 0.00013192 0.80908 0.00050268 621.299270513584 626.303378015585 57.409 0.6351 57.409 57.173 57.808 0 157 46 5 0 0 0 0.042459 2 29160 42.001 39.943 1 1.4863 1.2416 0 3308700 1283100 2025700 27868 1942 10520 10808 43606;43607 43607 PLDGEWGTNPR 11 0 1 Unmodified _PLDGEWGTNPR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.3023 2 621.299101 1240.58365 78135.13 0.52413 0.00032564 -0.18723 -0.00011633 0.3369 0.00020931 621.29901344363 626.303444832877 57.846 0.90686 57.846 57.614 58.521 0 201 66 5 0 0 0 0.0060749 1 28645 55.064 54.272 1 1.3787 1.2224 0 2397900 1032800 1365100 27869 1942 10520 10808 43608 43608 PLDGEWGTNPRDEECER 17 0 2 Unmodified _PLDGEWGTNPRDEECER_ 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.3042 3 687.29732 2058.87013 73259.12 0.39482 0.00027136 -0.24615 -0.00016918 0.14867 0.00010218 687.631703767446 693.969176210487 53.809 0.5765 53.809 53.546 54.123 3.8147E-06 160 39 6 0 0 0 0.039843 1 26092 13.832 13.832 1 1.3765 1.2378 0 2548100 993930 1554100 27870 1942 10521 10809 43609 43609 PLDSAMSAEEDTDVR 15 0 1 Oxidation (M) _PLDSAM(ox)SAEEDTDVR_ PLDSAM(1)SAEEDTDVR PLDSAM(57.8)SAEEDTDVR 0 1 0 Q99549;B3KS10;A0A0A0MT47 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.3594 2 826.359424 1650.70429 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.319 1 38.319 37.819 38.819 0 0 0 0 0.00055932 1 20100 57.802 51.698 1 27871 1994 10522 10810 43610 43610 1823 PLEPVSTVQVEPAVK 15 1 0 Unmodified _PLEPVSTVQVEPAVK_ 0 0 0 E7EPN9;Q9Y520;B4DM27 E7EPN9 E7EPN9 PRRC2C Protein PRRC2C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.9573 2 796.948338 1591.88212 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.85 1 83.85 83.35 84.35 0 0 0 0 0.0013825 1 50213 57.175 41.284 1 27872 1219 10523 10811 43611 43611 PLEPVSTVQVEPAVK 15 1 0 Unmodified _PLEPVSTVQVEPAVK_ 0 0 0 E7EPN9;Q9Y520;B4DM27 E7EPN9 E7EPN9 PRRC2C Protein PRRC2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 800.9537 2 796.948338 1591.88212 68546.52 0.46853 0.0003734 0.16538 0.0001318 0.63392 0.0005052 796.948877268861 800.955307251092 95.849 0.31441 95.849 95.714 96.029 0 53 21 4 0 0 0 0.0031207 2 52898 42.976 42.976 1 2.0509 1.7172 0 1517400 588200 929190 27873 1219 10523 10811 43612;43613 43612 PLEVNAIK 8 1 0 Unmodified _PLEVNAIK_ 0 0 0 O43290;E9PQI8 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.2663 2 442.26601 882.517468 NaN NaN NaN 0.25951 0.00011477 NaN NaN NaN NaN 48.807 0.4272 48.807 48.628 49.055 0 0 0 0 0.027641 1 27381 60.709 0 1 NaN NaN 0 7637500 7637500 0 27874 1384 10524 10812 43614 43614 PLFESSICGDSAADVSQSEENGQKPENK 28 2 0 Unmodified _PLFESSICGDSAADVSQSEENGQKPENK_ 0 0 1 O96028;Q05CW4;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1013.7994 3 1008.45601 3022.34619 61017.88 0.17396 0.00017543 0.13741 0.00013857 0.31137 0.000314 1008.79006142655 1014.4675505705 80.665 0.40626 80.665 80.5 80.906 -7.6294E-06 133 27 8 0 0 0 0.00026177 1 43566 33.649 33.649 1 2.1156 1.8338 0 3551600 1105900 2445700 27875 1435 10525 10813 43615 43615 PLFGPGYTGIR 11 0 1 Unmodified _PLFGPGYTGIR_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.3282 2 589.321848 1176.62914 NaN NaN NaN 0.6081 0.00035837 NaN NaN NaN NaN 83.824 0.63945 83.824 83.494 84.134 0 0 0 0 0.001528 1 51260 82.645 36.188 1 NaN NaN 0 12872000 0 12872000 27876 613 10526 10814 43616 43616 PLFHGDSEIDQLFR 14 0 1 Unmodified _PLFHGDSEIDQLFR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.6146 3 558.61425 1672.82092 86708.06 0.77029 0.0004303 -0.35136 -0.00019628 0.41893 0.00023402 558.948067731032 562.284672166882 106.45 0.5612 106.45 106.18 106.74 0 87 40 4 0 0 0 0.010033 2 66135 25.122 25.122 1 1.2804 1.3211 0 6211100 2015000 4196000 27877 25 10527 10815 43617;43618 43618 PLFINK 6 1 0 Unmodified _PLFINK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 366.226 2 366.226157 730.437761 102258.9 0.55712 0.00020403 -0.1151 -4.2153E-05 0.44202 0.00016188 366.226048270091 370.233102467733 49.899 0.55185 49.899 49.526 50.078 0 133 43 4 0 0 0 0.025304 1 27971 130.51 53.982 1 1.1036 1.1236 0 16957000 7404500 9552900 27878 1183 10528 10816 43619 43619 PLFPHVLCHNCAVEFNFGQK 20 1 0 Unmodified _PLFPHVLCHNCAVEFNFGQK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5;Q5RI18 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 805.7239 3 805.389268 2413.14598 66745.52 0.80605 0.00064918 -0.81877 -0.00065943 -0.012727 -1.0251E-05 805.72327156462 808.395061578645 111.08 0.6962 111.08 110.87 111.57 0 115 31 10 0 0 0 0.023528 1 64336 18.296 15.152 1 0.83255 0.66011 0 4668000 2775400 1892500 27879 999 10529 10817 43620 43620 PLFQFFVPDALNDR 14 0 1 Unmodified _PLFQFFVPDALNDR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.9376 2 839.933022 1677.85149 65690.75 1.222 0.0010264 -0.23265 -0.00019541 0.9894 0.00083103 840.435008347667 844.936273132831 129.94 0.67593 129.94 129.69 130.36 1.5259E-05 112 38 8 0 0 0 3.2513E-06 2 84697 103.08 88.207 1 1.5457 1.6197 0 4438500 2046700 2391800 27880 1205 10530 10818 43621;43622 43621 PLFSSASPQDSSPR 14 0 1 Unmodified _PLFSSASPQDSSPR_ 0 0 0 A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;B4DS74;A0A1B0GVN4;A0A1B0GWB8;Q5VW31 A0A1B0GW37 A0A1B0GW37 NFIB Nuclear factor 1;Nuclear factor 1 B-type ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3598 2 738.359887 1474.70522 NaN NaN NaN -0.9226 -0.00068121 NaN NaN NaN NaN 52.524 0.12037 52.524 52.436 52.557 0 0 0 0 0.015381 1 29208 48.44 29.197 1 NaN NaN 0 3110500 3110500 0 27881 473 10531 10819 43623 43623 PLFSSGQFSMK 11 1 0 Oxidation (M) _PLFSSGQFSM(ox)K_ PLFSSGQFSM(1)K PLFSSGQFSM(53.33)K 0 1 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8098 2 622.802631 1243.59071 78296.55 0.72199 0.00044965 -0.11352 -7.07E-05 0.60847 0.00037895 623.304193172514 626.809372312775 65.993 0.44786 65.993 65.738 66.186 0 116 42 4 0 0 0 0.0034095 1 37974 53.327 46.107 1 1.1348 1.1728 0 11053000 6044600 5008900 27882 1928 10532 10820 43624 43624 1765 PLFSSGQFSMK 11 1 0 Oxidation (M) _PLFSSGQFSM(ox)K_ PLFSSGQFSM(1)K PLFSSGQFSM(40.59)K 0 1 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.809 2 622.802631 1243.59071 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.668 1 64.668 64.168 65.168 0 0 0 0 0.034298 1 38082 40.589 10.78 1 27883 1928 10532 10820 43625 43625 1765 PLGSEDIDNQGLMMPK 16 1 0 2 Oxidation (M) _PLGSEDIDNQGLM(ox)M(ox)PK_ PLGSEDIDNQGLM(1)M(1)PK PLGSEDIDNQGLM(41.16)M(41.16)PK 0 2 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.9207 2 888.910769 1775.80699 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.209 1 61.209 60.709 61.709 0 0 0 0 0.026574 1 35000 41.164 32.056 1 27884 1742 10533 10821 43626 43626 1592;1593 PLGSEDIDNQGLMMPK 16 1 0 2 Oxidation (M) _PLGSEDIDNQGLM(ox)M(ox)PK_ PLGSEDIDNQGLM(1)M(1)PK PLGSEDIDNQGLM(78.34)M(78.34)PK 0 2 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.4205 2 888.910769 1775.80699 66928.45 0.42266 0.00037571 0.067582 6.0074E-05 0.49024 0.00043578 888.911336774495 892.917860221719 60.111 0.78059 60.111 59.882 60.663 0 100 50 5 0 0 0 0.00013577 1 35018 78.342 72.735 1 1.8058 1.8234 0 8265300 3500600 4764700 27885 1742 10533 10821 43627 43627 1592;1593 PLGSWSVK 8 1 0 Unmodified _PLGSWSVK_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 437.2471 2 437.245078 872.475603 95539.94 0.10086 4.4101E-05 0.36264 0.00015856 0.4635 0.00020266 437.245167167139 441.252264591745 55.81 0.70972 55.81 55.378 56.088 0 136 54 5 0 0 0 0.039022 1 31254 47.749 28.943 1 0.68987 0.71751 0 12414000 6496900 5917000 27886 2042 10534 10822 43628 43628 PLISVYSEK 9 1 0 Unmodified _PLISVYSEK_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2973 2 518.289682 1034.56481 84309.05 0.51331 0.00026604 0.082675 4.2849E-05 0.59599 0.00030889 518.289672186916 522.296706707911 63.858 1.7408 63.858 63.45 65.191 0 984 158 9 0 0 0 2.1383E-05 3 36549 117.04 50.354 1 0.92278 1.0923 0 435360000 224950000 210410000 27887 1548 10535 10823 43629;43630;43631 43629 PLISVYSEK 9 1 0 Unmodified _PLISVYSEK_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.2971 2 518.289682 1034.56481 84365.61 0.30674 0.00015898 0.049451 2.563E-05 0.35619 0.00018461 518.289670391632 522.296703406395 62.532 1.7908 62.532 62.071 63.862 0 918 159 8 0 0 0 0.00042467 4 37014 99.442 36.159 1 0.92652 1.0915 0 544700000 277150000 267550000 27888 1548 10535 10823 43632;43633;43634;43635 43635 PLISVYSEK 9 1 0 Unmodified _PLISVYSEK_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.2975 2 518.289682 1034.56481 84209.44 0.35617 0.0001846 0.070182 3.6375E-05 0.42635 0.00022097 518.289640062834 522.29673460271 73.236 1.9586 73.236 72.817 74.776 0 733 137 8 0 0 0 0.0042207 5 38598 69.812 25.417 1 1.0422 0.87497 0 52965000 25341000 27624000 27889 1548 10535 10823 43636;43637;43638;43639;43640 43637 PLISVYSEK 9 1 0 Unmodified _PLISVYSEK_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.2969 2 518.289682 1034.56481 84427.08 0.26627 0.000138 0.089931 4.661E-05 0.3562 0.00018461 518.28966310705 522.296722719208 73.598 1.8018 73.598 73.214 75.016 0 686 119 8 0 0 0 3.4163E-05 3 38007 112.41 55.864 1 1.0688 0.89844 0 50476000 24231000 26245000 27890 1548 10535 10823 43641;43642;43643 43642 PLIVVANK 8 1 0 Unmodified _PLIVVANK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.279 2 427.278921 852.543289 88395.39 0.042392 1.8113E-05 0.65199 0.00027858 0.69438 0.00029669 427.279187212236 431.28618158877 53.676 0.68606 53.676 53.42 54.106 0 188 53 6 0 0 0 6.5411E-05 1 29989 137.44 41.483 1 1.2768 1.4945 0 288160000 139260000 148900000 27891 1183 10536 10824 43644 43644 PLIVVANK 8 1 0 Unmodified _PLIVVANK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.2792 2 427.278921 852.543289 92697.2 -0.024027 -1.0266E-05 0.31452 0.00013439 0.29049 0.00012412 427.279157293946 431.285972459903 52.257 0.75026 52.257 52.055 52.805 3.8147E-06 252 56 7 0 0 0 6.5411E-05 2 29716 137.44 49.858 1 1.2304 1.4247 0 208690000 87920000 120770000 27892 1183 10536 10824 43645;43646 43646 PLIVVANK 8 1 0 Unmodified _PLIVVANK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 427.2791 2 427.278921 852.543289 94282.66 -0.29461 -0.00012588 0.68369 0.00029212 0.38908 0.00016625 427.279028617489 431.286152404396 60.775 0.8415 60.775 60.473 61.315 0 256 71 6 0 0 0 0.0042686 2 31118 94.163 19.446 1 1.5829 1.2506 0 6077800 2319300 3758500 27893 1183 10536 10824 43647;43648 43648 PLIVVANK 8 1 0 Unmodified _PLIVVANK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 431.2863 2 427.278921 852.543289 94084.89 -0.43629 -0.00018642 0.6944 0.0002967 0.25811 0.00011028 427.279058074083 431.286163175375 61.011 0.81441 61.011 60.687 61.502 3.8147E-06 292 71 6 0 0 0 0.034026 1 30501 49.59 16.232 1 1.4251 1.1634 0 5668500 2338500 3330000 27894 1183 10536 10824 43649 43649 PLLASCGLDR 10 0 1 Unmodified _PLLASCGLDR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.7952 2 551.289691 1100.56483 84868.75 0.506 0.00027895 0.87004 0.00047964 1.376 0.0007586 551.29067438218 556.293902400211 60.033 0.47599 60.033 59.819 60.295 3.8147E-06 137 41 5 0 0 0 0.00076782 2 34188 81.548 48.707 1 0.76879 0.79525 0 23374000 13520000 9853800 27895 1859 10537 10825 43650;43651 43650 PLLASCGLDR 10 0 1 Unmodified _PLLASCGLDR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.2931 2 551.289691 1100.56483 84378.18 0.8873 0.00048916 0.45919 0.00025314 1.3465 0.0007423 551.290378034916 556.293660716373 58.855 0.32781 58.855 58.711 59.039 3.8147E-06 131 31 5 0 0 0 0.00051176 2 34191 85.676 49.281 1 0.84624 0.92604 0 33597000 19894000 13703000 27896 1859 10537 10825 43652;43653 43652 PLLASCGLDR 10 0 1 Unmodified _PLLASCGLDR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.2934 2 551.289691 1100.56483 80366.13 0.27388 0.00015099 0.13601 7.4979E-05 0.40989 0.00022597 551.289910795485 556.293884642624 69.287 0.5641 69.287 69.01 69.574 7.6294E-06 111 37 4 0 0 0 0.012313 2 36192 50.805 23.551 1 1.2787 1.0768 0 4601300 1981400 2619900 27897 1859 10537 10825 43654;43655 43655 PLLASCGLDR 10 0 1 Unmodified _PLLASCGLDR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.2944 2 551.289691 1100.56483 81512.85 0.51102 0.00028172 -0.48278 -0.00026615 0.028234 1.5565E-05 551.290001475375 556.293629208987 69.705 0.54726 69.705 69.43 69.977 -7.6294E-06 158 37 6 0 0 0 0.010335 1 35767 53.493 26.239 1 1.2913 1.1144 0 3407300 1396300 2011000 27898 1859 10537 10825 43656 43656 PLLDEIVPVYR 11 0 1 Unmodified _PLLDEIVPVYR_ 0 0 0 A0A024R3P9;Q9H3P7 A0A024R3P9 A0A024R3P9 ACBD3 Golgi resident protein GCP60 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.381 2 657.37682 1312.73909 NaN NaN NaN 0.28199 0.00018537 NaN NaN NaN NaN 114.05 0.43398 114.05 113.84 114.27 -7.6294E-06 0 0 0 0.0013489 1 74125 83.948 52.874 1 NaN NaN 0 4269600 0 4269600 27899 136 10538 10826 43657 43657 PLLFMDLLDER 11 0 1 Oxidation (M) _PLLFM(ox)DLLDER_ PLLFM(1)DLLDER PLLFM(105.98)DLLDER 0 1 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.3612 2 689.35777 1376.70099 73135.8 0.56904 0.00039227 -0.4625 -0.00031883 0.10654 7.3442E-05 689.357286942069 694.36155929773 122.66 0.75508 122.66 122.38 123.13 0 260 56 6 0 0 0 8.3781E-06 3 79302 105.98 105.98 1 1.3839 1.3831 0 16792000 7788700 9003000 27900 1955 10539 10827 43658;43659;43660 43659 1806 PLLFMDLLDER 11 0 1 Oxidation (M) _PLLFM(ox)DLLDER_ PLLFM(1)DLLDER PLLFM(102.52)DLLDER 0 1 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.3608 2 689.35777 1376.70099 73379.99 0.81537 0.00056208 -0.70948 -0.00048908 0.10589 7.2998E-05 689.357123121257 694.361449475703 122.11 0.76182 122.11 121.84 122.6 -7.6294E-06 273 56 7 0 0 0 1.2667E-05 3 80841 102.52 102.52 1 1.4676 1.4566 0 16018000 6925900 9092000 27901 1955 10539 10827 43661;43662;43663 43663 1806 PLLFMDLLDER 11 0 1 Oxidation (M) _PLLFM(ox)DLLDER_ PLLFM(1)DLLDER PLLFM(42)DLLDER 0 1 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3587 2 689.35777 1376.70099 74735.23 0.74601 0.00051427 -0.69474 -0.00047892 0.051273 3.5346E-05 689.35726413585 694.360920794499 134.39 0.33093 134.39 134.17 134.5 0 51 14 6 0 0 0 0.011589 1 81198 42.001 23.221 1 0.80611 0.66985 0 5961900 3239800 2722100 27902 1955 10539 10827 43664 43664 1806 PLLFMDLLDER 11 0 1 Unmodified _PLLFMDLLDER_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4 Q969X6 Q969X6 CIRH1A Cirhin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.361 2 681.360313 1360.70607 NaN NaN NaN -0.45502 -0.00031003 NaN NaN NaN NaN 132.41 0.47049 132.41 132.26 132.73 0 0 0 0 0.00062064 1 86489 89.247 75.894 1 NaN NaN 0 1913500 1913500 0 27903 1955 10539 10828 43665 43665 PLLFMDLLDER 11 0 1 Unmodified _PLLFMDLLDER_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4 Q969X6 Q969X6 CIRH1A Cirhin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.3642 2 681.360313 1360.70607 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.54 1 132.54 132.04 133.04 0 0 0 0 0.0019117 1 86608 68.735 47.833 1 27904 1955 10539 10828 43666 43666 PLLGGPFSLTTHTGER 16 0 1 Unmodified _PLLGGPFSLTTHTGER_ 0 0 0 J3QL56;O75880;B3KQB1 J3QL56 J3QL56 SCO1 Protein SCO1 homolog, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.9703 3 561.633533 1681.87877 NaN NaN NaN -0.30643 -0.0001721 NaN NaN NaN NaN 90.164 0.52322 90.164 89.858 90.381 7.6294E-06 0 0 0 0.003347 1 54361 46.892 35.452 1 NaN NaN 0 10804000 0 10804000 27905 1334 10540 10829 43667 43667 PLLGGPFSLTTHTGER 16 0 1 Unmodified _PLLGGPFSLTTHTGER_ 0 0 0 J3QL56;O75880;B3KQB1 J3QL56 J3QL56 SCO1 Protein SCO1 homolog, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.9695 3 561.633533 1681.87877 84809.04 0.7081 0.00039769 -0.11622 -6.5274E-05 0.59188 0.00033242 561.967827748504 564.969427739095 88.728 0.32703 88.728 88.531 88.858 -7.6294E-06 75 26 4 0 0 0 4.6261E-07 2 54710 95.347 95.347 1 1.05 1.0839 0 21546000 9794000 11752000 27906 1334 10540 10829 43668;43669 43669 PLLLQLPIGEAK 12 1 0 Unmodified _PLLLQLPIGEAK_ 0 0 0 A0A024RAJ7;A0A024RAK1;Q969S9;D6RAL1 A0A024RAJ7 A0A024RAJ7 GFM2 Ribosome-releasing factor 2, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.4111 2 646.402838 1290.79112 NaN NaN NaN 0.80219 0.00051854 NaN NaN NaN NaN 118.75 0.55788 118.75 118.39 118.95 -7.6294E-06 0 0 0 0.0014978 2 76269 77.379 36.35 1 NaN NaN 0 1622400 0 1622400 27907 307 10541 10830 43670;43671 43670 PLLLQLPIGEAK 12 1 0 Unmodified _PLLLQLPIGEAK_ 0 0 0 A0A024RAJ7;A0A024RAK1;Q969S9;D6RAL1 A0A024RAJ7 A0A024RAJ7 GFM2 Ribosome-releasing factor 2, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.4107 2 646.402838 1290.79112 NaN NaN NaN 0.76287 0.00049312 NaN NaN NaN NaN 118.17 0.39861 118.17 117.99 118.39 0 0 0 0 0.0050706 1 77709 62.823 22.778 1 NaN NaN 0 3893800 0 3893800 27908 307 10541 10830 43672 43672 PLLQEELGR 9 0 1 Unmodified _PLLQEELGR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.8024 2 527.798206 1053.58186 84878.93 0.34323 0.00018116 0.092301 4.8716E-05 0.43553 0.00022987 527.798239697298 532.802268393615 66.153 0.71237 66.153 65.695 66.407 0 296 65 7 0 0 0 6.9342E-08 2 38123 143.01 99.887 1 0.97764 1.0886 0 80030000 41606000 38424000 27909 1618 10542 10831 43673;43674 43674 PLLQEELGR 9 0 1 Unmodified _PLLQEELGR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.8024 2 527.798206 1053.58186 84926.33 0.20283 0.00010705 0.15675 8.2733E-05 0.35958 0.00018979 527.79828955643 532.802209585104 64.946 0.81086 64.946 64.44 65.251 0 277 69 7 0 0 0 0.00076395 2 38106 105.57 80.645 1 0.99429 1.1344 0 94291000 50061000 44230000 27910 1618 10542 10831 43675;43676 43676 PLLQEELGR 9 0 1 Unmodified _PLLQEELGR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.8022 2 527.798206 1053.58186 83568.65 0.38056 0.00020086 0.045347 2.3934E-05 0.42591 0.00022479 527.798093607644 532.802339601475 75.598 0.99493 75.598 75.146 76.141 0 338 70 6 0 0 0 0.016189 2 40348 64.485 39.562 1 1.164 1.0012 0 6887300 3250300 3637000 27911 1618 10542 10831 43677;43678 43678 PLLQVSR 7 0 1 Unmodified _PLLQVSR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.757 2 406.75307 811.491587 96191.98 0.11353 4.618E-05 0.41478 0.00016871 0.52832 0.00021489 406.753185577291 411.757194235836 46.847 0.80141 46.847 46.391 47.193 0 269 73 6 0 0 0 0.027156 1 25204 73.975 5.49 1 1.5836 1.7634 0 80252000 31640000 48612000 27912 81 10543 10832 43679 43679 PLLSFDPAFDELPHYALLK 19 1 0 Unmodified _PLLSFDPAFDELPHYALLK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.7244 3 729.389257 2185.14594 71566.16 0.72984 0.00053234 0.26782 0.00019535 0.99766 0.00072768 729.72391968163 732.395605925189 129.5 0.87811 129.5 129.15 130.03 0 353 59 8 0 0 0 2.2624E-12 3 84282 102.08 102.08 1 0.94671 1.0179 0 38848000 15730000 23118000 27913 1934 10544 10833 43680;43681;43682 43681 PLLSFDPAFDELPHYALLK 19 1 0 Unmodified _PLLSFDPAFDELPHYALLK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.0615 3 729.389257 2185.14594 71197.11 0.57606 0.00042017 0.097336 7.0996E-05 0.6734 0.00049117 729.723955929031 732.395640685075 128.94 1.1142 128.94 128.54 129.65 0 445 85 8 0 0 0 4.82E-17 3 85987 113.28 105.47 1 0.96235 1.0661 0 46565000 22155000 24410000 27914 1934 10544 10833 43683;43684;43685 43683 PLLSFDPAFDELPHYALLK 19 1 0 Unmodified _PLLSFDPAFDELPHYALLK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.3887 3 729.389257 2185.14594 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.58 1 128.58 128.08 129.08 0 0 0 0 0.00033448 1 85940 65.716 41.675 1 27915 1934 10544 10833 43686 43686 PLLSFDPAFDELPHYALLK 19 1 0 Unmodified _PLLSFDPAFDELPHYALLK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.724 3 729.389257 2185.14594 70405.99 0.82621 0.00060263 -0.084071 -6.132E-05 0.74214 0.00054131 729.723660490582 732.394656228561 134.61 0.20041 134.61 134.5 134.7 0 26 5 9 0 0 0 0.043398 1 82311 13.832 13.832 1 1.5656 1.2714 0 27553000 10471000 17082000 27916 1934 10544 10833 43687 43687 PLLSNEVIWLDSK 13 1 0 Unmodified _PLLSNEVIWLDSK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.4183 2 757.416674 1512.81879 73037.73 0.36892 0.00027943 0.66763 0.00050567 1.0366 0.0007851 757.417296192608 761.424052268663 114.3 0.47248 114.3 114.09 114.56 0 138 33 6 0 0 0 0.00012265 2 72383 89.301 71.436 1 0.60782 0.61924 0 13255000 8170900 5084300 27917 1421 10545 10834 43688;43689 43688 PLLSNEVIWLDSK 13 1 0 Unmodified _PLLSNEVIWLDSK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.417 2 757.416674 1512.81879 71992.13 0.42869 0.0003247 0.59426 0.0004501 1.0229 0.0007748 757.417514953728 761.423937718038 113.74 0.52927 113.74 113.48 114.01 0 157 38 6 0 0 0 1.8961E-06 1 73796 110.31 91.561 1 0.67462 0.68691 0 12366000 7531700 4834200 27918 1421 10545 10834 43690 43690 PLLSNEVIWLDSK 13 1 0 Unmodified _PLLSNEVIWLDSK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.9196 2 757.416674 1512.81879 70788.66 0.86502 0.00065518 0.20501 0.00015527 1.07 0.00081045 757.416624962957 761.424065131372 125.57 0.69019 125.57 125.22 125.91 0 115 26 7 0 0 0 0.0001199 2 75361 74.392 56.528 1 1.2071 0.96555 0 7098400 3340700 3757700 27919 1421 10545 10834 43691;43692 43692 PLLSNEVIWLDSK 13 1 0 Unmodified _PLLSNEVIWLDSK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.9189 2 757.416674 1512.81879 71266.79 0.80281 0.00060806 0.29067 0.00022016 1.0935 0.00082822 757.416549417212 761.925463100165 125.38 0.52254 125.38 125.15 125.67 -7.6294E-06 113 22 8 0 0 0 0.00014079 2 74332 89.189 64.334 1 1.2148 0.99011 0 6607300 3056800 3550500 27920 1421 10545 10834 43693;43694 43694 PLMLIAPK 8 1 0 Oxidation (M) _PLM(ox)LIAPK_ PLM(1)LIAPK PLM(48.12)LIAPK 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.7825 2 449.775157 897.53576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.662 1 69.662 69.162 70.162 0 0 0 0 0.032328 1 40495 48.115 29.736 1 27921 878 10546 10835 43695 43695 690 PLMLIAPK 8 1 0 Oxidation (M) _PLM(ox)LIAPK_ PLM(1)LIAPK PLM(96.05)LIAPK 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.7825 2 449.775157 897.53576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.479 1 68.479 67.979 68.979 0 0 0 0 0.0015806 1 40693 96.048 69.252 1 27922 878 10546 10835 43696 43696 690 PLNVFR 6 0 1 Unmodified _PLNVFR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;B3KXA9 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.2214 2 373.221406 744.428259 99196.91 0.30322 0.00011317 -0.13747 -5.1307E-05 0.16575 6.1863E-05 373.221186239927 378.225387163026 52.386 0.3919 52.386 52.143 52.535 3.8147E-06 122 30 6 0 0 0 0.037647 1 29860 123.53 0 1 1.5721 1.695 0 26119000 9412200 16707000 27923 883 10547 10836 43697 43697 PLNYQILLK 9 1 0 Unmodified _PLNYQILLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.3371 2 551.336967 1100.65938 82106.81 0.76466 0.00042159 0.011644 6.4196E-06 0.77631 0.00042801 551.336930553135 555.343988549052 98.103 0.87365 98.103 97.762 98.636 0 400 71 8 0 0 0 2.6466E-12 3 59808 161.12 161.12 1 0.90284 1.0237 0 96235000 51271000 44964000 27924 897 10548 10837 43698;43699;43700 43699 PLNYQILLK 9 1 0 Unmodified _PLNYQILLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.3391 2 551.336967 1100.65938 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.651 1 98.651 98.151 99.151 0 0 0 0 0.0015963 1 60322 91.9 62.524 1 27925 897 10548 10837 43701 43701 PLNYQILLK 9 1 0 Unmodified _PLNYQILLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.3441 2 551.336967 1100.65938 82289.55 0.76161 0.00041991 0.085178 4.6962E-05 0.84679 0.00046687 551.336961574539 555.343923679204 97.229 0.95531 97.229 96.897 97.852 0 421 74 8 0 0 0 2.503E-05 2 60627 113.91 109.01 1 0.87583 0.9794 0 86297000 43509000 42788000 27926 897 10548 10837 43702;43703 43703 PLNYQILLK 9 1 0 Unmodified _PLNYQILLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.3447 2 551.336967 1100.65938 81478.98 0.66634 0.00036738 0.14611 8.0554E-05 0.81245 0.00044793 551.336941428827 555.344039547545 111.29 0.68896 111.29 111.03 111.72 0 168 31 8 0 0 0 1.4737E-05 2 64389 122.74 110.79 1 1.2053 0.93445 0 13720000 6144200 7575500 27927 897 10548 10837 43704;43705 43704 PLNYQILLK 9 1 0 Unmodified _PLNYQILLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.3375 2 551.336967 1100.65938 81327.62 0.62591 0.00034509 -0.096774 -5.3355E-05 0.52914 0.00029173 551.336848250037 555.343879179641 111.16 0.60831 111.16 110.86 111.47 0 163 29 8 0 0 0 1.9329E-12 2 63345 161.68 161.68 1 1.1489 0.94943 0 11709000 5903400 5805900 27928 897 10548 10837 43706;43707 43707 PLPEPSEQEGESVK 14 1 0 Unmodified _PLPEPSEQEGESVK_ 0 0 0 Q4VC44;I3L0R3;I3L231;I3L4I0;I3L1Y9;Q96CP2 Q4VC44;I3L1Y9 Q4VC44 FLYWCH1;FLYWCH2 FLYWCH-type zinc finger-containing protein 1;FLYWCH family member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.3795 2 763.37266 1524.73077 72866.57 0.82697 0.00063129 -0.70656 -0.00053937 0.12041 9.1916E-05 763.372031895361 767.379429196971 43.646 0.49544 43.646 43.413 43.909 0 133 43 6 0 0 0 0.0054113 1 23262 46.706 46.706 1 1.1785 1.1829 0 18643000 6760300 11883000 27929 1781;1320 10549 10838 43708 43708 PLPEPSEQEGESVK 14 1 0 Unmodified _PLPEPSEQEGESVK_ 0 0 0 Q4VC44;I3L0R3;I3L231;I3L4I0;I3L1Y9;Q96CP2 Q4VC44;I3L1Y9 Q4VC44 FLYWCH1;FLYWCH2 FLYWCH-type zinc finger-containing protein 1;FLYWCH family member 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.382 2 763.37266 1524.73077 NaN NaN NaN 0.050447 3.851E-05 NaN NaN NaN NaN 42.906 0.43167 42.906 42.66 43.092 0 0 0 0 0.017083 1 23089 47.288 22.071 1 NaN NaN 0 15747000 0 15747000 27930 1781;1320 10549 10838 43709 43709 PLPEYHVR 8 0 1 Unmodified _PLPEYHVR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 337.5185 3 337.518781 1009.53451 105684.9 0.14124 4.7672E-05 0.066895 2.2578E-05 0.20814 7.0251E-05 337.518749985166 340.854755266911 33.821 0.29773 33.821 33.66 33.958 0 74 19 6 0 0 0 0.012647 1 17010 46.994 37.406 1 0.70927 0.717 0 19871000 11693000 8177900 27931 1665 10550 10839 43710 43710 PLPFGTLGVHK 11 1 0 Unmodified _PLPFGTLGVHK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 389.2288 3 389.229119 1164.66553 NaN NaN NaN -0.28143 -0.00010954 NaN NaN NaN NaN 77.078 0.59372 77.078 76.866 77.46 0 0 0 0 0.02383 1 45481 39.918 20.675 1 NaN NaN 0 6403800 6403800 0 27932 1589 10551 10840 43711 43711 PLPGEEPLFTIPHTQEAFR 19 0 1 Unmodified _PLPGEEPLFTIPHTQEAFR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.7158 3 727.044261 2178.11095 NaN NaN NaN 0.61593 0.00044781 NaN NaN NaN NaN 108.7 1.7421 108.7 108.18 109.92 0 0 0 0 0.010461 1 67858 30.956 27.718 1 NaN NaN 0 103350000 0 103350000 27933 2103 10552 10841 43712 43712 PLPGEEPLFTIPHTQEAFR 19 0 1 Unmodified _PLPGEEPLFTIPHTQEAFR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.7154 3 727.044261 2178.11095 NaN NaN NaN -0.05688 -4.1355E-05 NaN NaN NaN NaN 119.24 0.89881 119.24 118.92 119.82 0 0 0 0 0.00095553 1 70475 45.608 42.418 1 NaN NaN 0 56208000 0 56208000 27934 2103 10552 10841 43713 43713 PLPGEEPLFTIPHTQEAFR 19 0 1 Unmodified _PLPGEEPLFTIPHTQEAFR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.7151 3 727.044261 2178.11095 71053.05 0.81942 0.00059575 -0.010939 -7.953E-06 0.80848 0.0005878 727.377813623544 730.714630652126 119.01 0.98347 119.01 118.61 119.59 -7.6294E-06 203 44 8 0 0 0 0.0001795 1 69388 38.271 38.271 1 20.375 17.774 0 43571000 1997800 41573000 27935 2103 10552 10841 43714 43714 PLPLHFLR 8 0 1 Unmodified _PLPLHFLR_ 0 0 0 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9;Q9BWU7;Q7Z4Z4;H0YMP3;H1UBN3;Q5U0M0;Q53HG9;O95067 P14635;H0YMP3 P14635 CCNB1;CCNB1V;CCNB2;CCNB2V G2/mitotic-specific cyclin-B1;G2/mitotic-specific cyclin-B2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 334.8757 3 331.539517 991.596721 NaN NaN NaN -0.52648 -0.00017455 NaN NaN NaN NaN 82.858 0.16596 82.858 82.717 82.883 -7.6294E-06 0 0 0 0.048112 1 49560 31.304 22.885 1 NaN NaN 0 1755000 0 1755000 27936 1483;1297 10553 10842 43715 43715 PLPLHFLR 8 0 1 Unmodified _PLPLHFLR_ 0 0 0 P14635;E9PC90;H1UBN2;H0YA62;Q9BWU8;Q9BWV0;Q9BWU9;Q9BPX9;Q9BWU7;Q7Z4Z4;H0YMP3;H1UBN3;Q5U0M0;Q53HG9;O95067 P14635;H0YMP3 P14635 CCNB1;CCNB1V;CCNB2;CCNB2V G2/mitotic-specific cyclin-B1;G2/mitotic-specific cyclin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 331.5394 3 331.539517 991.596721 108939.4 0.33287 0.00011036 -0.53001 -0.00017572 -0.19714 -6.536E-05 331.539248073624 334.875442080577 80.944 0.92019 80.944 80.517 81.437 0 165 77 4 0 0 0 0.006086 2 49483 58.917 58.917 1 0.68901 0.68589 0 8021700 3595800 4425800 27937 1483;1297 10553 10842 43716;43717 43716 PLPPAAIESPAVAAPAYSR 19 0 1 Unmodified _PLPPAAIESPAVAAPAYSR_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 944.5153 2 939.509625 1877.0047 63224.1 0.63866 0.00060003 0.14794 0.000139 0.78661 0.00073902 939.509536391273 945.015309256761 95.505 0.88257 95.505 95.041 95.924 -7.6294E-06 271 69 5 0 0 0 2.5353E-05 1 57906 58.831 58.831 1 1.3166 1.3379 0 29373000 11697000 17676000 27938 1443 10554 10843 43718 43718 PLPPAAIESPAVAAPAYSR 19 0 1 Unmodified _PLPPAAIESPAVAAPAYSR_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.0153 2 939.509625 1877.0047 63744.02 0.66154 0.00062152 0.023106 2.1708E-05 0.68465 0.00064323 940.010892591107 944.513969001172 94.886 0.80367 94.886 94.385 95.189 0 321 67 8 0 0 0 1.7648E-05 2 58723 64.224 64.224 1 1.3957 1.5897 0 49490000 23580000 25910000 27939 1443 10554 10843 43719;43720 43719 PLPPAAIESPAVAAPAYSR 19 0 1 Unmodified _PLPPAAIESPAVAAPAYSR_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 945.0159 2 939.509625 1877.0047 64763.77 0.63359 0.00059526 0.20184 0.00018963 0.83543 0.0007849 940.01123126376 945.015235753598 108.5 0.67229 108.5 108.18 108.85 0 98 33 4 0 0 0 0.00045503 1 61366 40.941 40.941 1 1.4293 1.2648 0 2419800 1007700 1412100 27940 1443 10554 10843 43721 43721 PLQYQSTVASGTVAR 15 0 1 Unmodified _PLQYQSTVASGTVAR_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.4185 2 789.417736 1576.82092 69497.45 0.651 0.00051391 0.06595 5.2062E-05 0.71695 0.00056597 789.919250763858 794.421660431614 54.149 0.39157 54.149 53.956 54.348 3.8147E-06 161 31 6 0 0 0 2.3703E-07 2 30326 107.85 107.85 1 0.92115 0.93519 0 27841000 12405000 15436000 27941 1721 10555 10844 43722;43723 43722 PLQYQSTVASGTVAR 15 0 1 Unmodified _PLQYQSTVASGTVAR_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.9195 2 789.417736 1576.82092 69611.48 0.18196 0.00014364 0.45027 0.00035545 0.63223 0.00049909 789.418270517591 794.421895738689 53.282 0.48116 53.282 53.037 53.518 3.8147E-06 189 44 6 0 0 0 4.5682E-11 2 30401 124.12 124.12 1 0.94641 1.0222 0 26632000 15396000 11236000 27942 1721 10555 10844 43724;43725 43724 PLQYQSTVASGTVAR 15 0 1 Unmodified _PLQYQSTVASGTVAR_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 794.4224 2 789.417736 1576.82092 68482.82 0.33952 0.00026802 0.18912 0.00014929 0.52864 0.00041731 789.417929361036 794.422001575069 63.45 0.65948 63.45 63.172 63.832 -3.8147E-06 304 56 7 0 0 0 3.7462E-07 2 32545 105.03 105.03 1 1.2916 1.0542 0 14550000 6317400 8232300 27943 1721 10555 10844 43726;43727 43727 PLQYQSTVASGTVAR 15 0 1 Unmodified _PLQYQSTVASGTVAR_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 794.4224 2 789.417736 1576.82092 68736.53 0.42018 0.0003317 -0.18956 -0.00014964 0.23062 0.00018206 789.416826838392 794.42176035438 64.032 0.96909 64.032 63.775 64.744 0 362 81 8 0 0 0 0.00015901 2 32190 78.903 78.903 1 1.2482 1.0184 0 12845000 5504900 7339800 27944 1721 10555 10844 43728;43729 43729 PLRLPLQDVYK 11 1 1 Unmodified _PLRLPLQDVYK_ 0 0 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.9428 3 447.934484 1340.78162 89384.7 0.34807 0.00015591 0.2064 9.2455E-05 0.55448 0.00024837 447.934496844838 453.942039626759 86.938 1.0761 86.938 86.31 87.387 0 393 83 8 0 0 0 0.0019834 2 52147 58.274 58.274 1 2.6692 3.2249 0 172440000 51119000 121330000 27945 1658;1790 10556 10845 43730;43731 43731 PLRLPLQDVYK 11 1 1 Unmodified _PLRLPLQDVYK_ 0 0 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.2686 3 447.934484 1340.78162 88812.21 0.24396 0.00010928 0.059988 2.6871E-05 0.30395 0.00013615 447.934407187302 453.941914211624 85.382 1.3224 85.382 84.611 85.934 0 577 107 8 0 0 0 0.0031881 3 52158 53.567 53.567 1 2.6864 3.1713 0 130790000 37220000 93573000 27946 1658;1790 10556 10845 43732;43733;43734 43732 PLRLPLQDVYK 11 1 1 Unmodified _PLRLPLQDVYK_ 0 0 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 453.9425 3 447.934484 1340.78162 88886.43 0.11389 5.1015E-05 -0.044264 -1.9827E-05 0.069626 3.1188E-05 447.934335738962 453.941854453931 98.032 1.3292 98.032 97.563 98.893 -7.6294E-06 418 81 8 0 0 0 0.026973 1 54290 33.542 33.542 1 1.7656 1.4973 0 18092000 6324700 11768000 27947 1658;1790 10556 10845 43735 43735 PLSAVPK 7 1 0 Unmodified _PLSAVPK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 360.2307 2 356.223614 710.432676 102181.4 0.068529 2.4412E-05 -0.086232 -3.0718E-05 -0.017703 -6.3061E-06 356.223482103296 360.230641150753 27.294 0.44849 27.294 27.034 27.483 0 88 22 5 0 0 0 0.018704 1 12506 95.793 36.184 1 1.3312 1.4028 0 35246000 16322000 18924000 27948 1945 10557 10846 43736 43736 PLSENELLELFEK 13 1 0 Unmodified _PLSENELLELFEK_ 0 0 0 B7ZB09;B4DPV3;Q9NSV4 B7ZB09 B7ZB09 DIAPH3 Protein diaphanous homolog 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.9194 2 780.911421 1559.80829 NaN NaN NaN -0.044544 -3.4785E-05 NaN NaN NaN NaN 125.14 0.3669 125.14 125.02 125.38 0 0 0 0 0.0019329 1 83368 72.652 38.777 1 NaN NaN 0 1453500 0 1453500 27949 1022 10558 10847 43737 43737 PLSGNSNSSGSESFK 15 1 0 Unmodified _PLSGNSNSSGSESFK_ 0 0 0 B2RA91;F8VXG7;Q99590 B2RA91 B2RA91 SCAF11 Protein SCAF11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.3513 2 749.344434 1496.67432 72869.13 0.51372 0.00038496 -0.041867 -3.1373E-05 0.47186 0.00035358 749.344534427884 753.351144742261 25 0.20535 25 24.883 25.088 1.9073E-06 41 11 6 0 0 0 0.00022171 2 10664 66.393 61.877 1 1.1152 1.1314 0 6572500 2807800 3764600 27950 871 10559 10848 43738;43739 43738 PLSGNSNSSGSESFK 15 1 0 Unmodified _PLSGNSNSSGSESFK_ 0 0 0 B2RA91;F8VXG7;Q99590 B2RA91 B2RA91 SCAF11 Protein SCAF11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.3523 2 749.344434 1496.67432 72607.2 0.71681 0.00053713 0.40174 0.00030104 1.1185 0.00083817 749.344726698699 753.351839369164 24.805 0.19167 24.805 24.716 24.908 0 24 8 4 0 0 0 0.00021228 2 10517 75.695 75.695 1 1.2176 1.2056 0 5879400 2198700 3680700 27951 871 10559 10848 43740;43741 43740 PLSHQPGPEAPALPK 15 1 0 Unmodified _PLSHQPGPEAPALPK_ 0 0 0 A0A024RCN6;P26640;A0A140T936;A0A140T954 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.6161 3 513.615702 1537.82528 84109.38 0.63589 0.0003266 -0.78421 -0.00040278 -0.14832 -7.6178E-05 513.615376003496 516.62030103216 48.567 0.5719 48.567 48.322 48.894 3.8147E-06 125 42 4 0 0 0 0.0045806 1 26520 25.558 13.197 1 0.94597 0.93397 0 25279000 11547000 13732000 27952 363 10560 10849 43742 43742 PLSHQPGPEAPALPK 15 1 0 Unmodified _PLSHQPGPEAPALPK_ 0 0 0 A0A024RCN6;P26640;A0A140T936;A0A140T954 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.287 3 513.615702 1537.82528 83362.7 0.33686 0.00017301 -0.23181 -0.00011906 0.10504 5.3952E-05 513.615357712249 516.287341228951 47.062 0.53696 47.062 46.768 47.305 -3.8147E-06 177 45 5 0 0 0 0.0018391 1 26063 36.638 36.638 1 1.0425 1.0529 0 28506000 12775000 15730000 27953 363 10560 10849 43743 43743 PLSIEEIEVAPPK 13 1 0 Unmodified _PLSIEEIEVAPPK_ 0 0 0 Q6IRT1;Q6FI45;P11766;H0YAG8;Q5U043;D6RAY0;D6R9G2;D6RFE4;Q2VIM7 Q6IRT1 Q6IRT1 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.9104 2 711.39795 1420.78135 73112.87 1.1289 0.0008031 1.281 0.00091131 2.4099 0.0017144 711.399308054455 715.406245684723 100.83 0.51939 100.83 100.52 101.04 0 131 35 5 0 0 0 0.005013 1 61970 60.518 60.518 1 3.0056 2.9652 0 24948000 3783700 21164000 27954 1472 10561 10850 43744 43744 PLSIGGIIILK 11 1 0 Unmodified _PLSIGGIIILK_ 0 0 0 B2R6D0;A0A087WW66;Q99460 B2R6D0 B2R6D0 PSMD1 26S proteasome non-ATPase regulatory subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.3837 2 562.376092 1122.73763 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.89 1 124.89 124.39 125.39 0 0 0 0 0.031577 1 81153 48.283 41.063 1 27955 424 10562 10851 43745 43745 PLSIGGIIILK 11 1 0 Unmodified _PLSIGGIIILK_ 0 0 0 B2R6D0;A0A087WW66;Q99460 B2R6D0 B2R6D0 PSMD1 26S proteasome non-ATPase regulatory subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.8857 2 562.376092 1122.73763 NaN NaN NaN -0.32782 -0.00018436 NaN NaN NaN NaN 124.6 0.36346 124.6 124.44 124.8 7.6294E-06 0 0 0 0.0019317 1 82837 79.474 60.38 1 NaN NaN 0 1615500 0 1615500 27956 424 10562 10851 43746 43746 PLSIGGIIILK 11 1 0 Unmodified _PLSIGGIIILK_ 0 0 0 B2R6D0;A0A087WW66;Q99460 B2R6D0 B2R6D0 PSMD1 26S proteasome non-ATPase regulatory subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.3758 2 562.376092 1122.73763 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.64 1 124.64 124.14 125.14 0 0 0 0 0.053525 1 82945 43.083 20.064 1 27957 424 10562 10851 43747 43747 PLSSLTPLIMAAK 13 1 0 Oxidation (M) _PLSSLTPLIM(ox)AAK_ PLSSLTPLIM(1)AAK PLSSLTPLIM(96.89)AAK 0 1 0 A8K5M4;Q9Y6B5;Q13177;H7C1X3 A8K5M4 A8K5M4 PAK2 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.3985 2 679.391613 1356.76867 77274.49 0.70927 0.00048187 0.10425 7.0829E-05 0.81352 0.0005527 679.89392601 683.398491914632 103.52 0.55678 103.52 103.25 103.81 0 87 44 4 0 0 0 2.3315E-05 1 63779 96.89 96.89 1 4.3462 4.4378 0 14282000 2570500 11711000 27958 750 10563 10852 43748 43748 582 PLSSSSVLQEPPAK 14 1 0 Unmodified _PLSSSSVLQEPPAK_ 0 0 0 B4DLG2;O75152;B4DYM8;A0A1B0GTU1;A0A024R8H9;A0A1B0GUI2 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.3962 2 720.390656 1438.76676 NaN NaN NaN 0.25157 0.00018123 NaN NaN NaN NaN 58.034 0.3386 58.034 57.833 58.171 0 0 0 0 4.7137E-06 1 33635 95.401 78.73 1 NaN NaN 0 7626600 0 7626600 27959 996 10564 10853 43749 43749 PLSSVQENIQQK 12 1 0 Unmodified _PLSSVQENIQQK_ 0 0 0 P52732;B2RAM6;Q59GZ5 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8751 2 685.867348 1369.72014 72765.48 0.37724 0.00025874 0.31512 0.00021613 0.69236 0.00047487 685.867556203512 689.874615167169 37.617 0.37259 37.617 37.392 37.765 0 129 29 6 0 0 0 1.4535E-73 2 19520 217.14 198.97 1 2.1197 2.1436 0 26698000 7940000 18758000 27960 1602 10565 10854 43750;43751 43750 PLTSFGSAPSSEGAK 15 1 0 Unmodified _PLTSFGSAPSSEGAK_ 0 0 0 E7EPN9;Q9Y520;H7C5N8 E7EPN9 E7EPN9 PRRC2C Protein PRRC2C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.3638 2 718.356813 1434.69907 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.247 1 50.247 49.747 50.747 3.8147E-06 0 0 0 0.021135 1 27720 43.544 26.313 1 27961 1219 10566 10855 43752 43752 PLTSNCTIQIATPGK 15 1 0 Unmodified _PLTSNCTIQIATPGK_ 0 0 0 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.9261 2 800.921797 1599.82904 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.208 1 72.208 71.708 72.708 0 0 0 0 0.00145 1 43334 71.806 50.342 1 27962 1752 10567 10856 43753 43753 PLTSNCTIQIATPGK 15 1 0 Unmodified _PLTSNCTIQIATPGK_ 0 0 0 Q15061;C9IZK7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.9254 2 800.921797 1599.82904 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.232 1 72.232 71.732 72.732 0 0 0 0 0.0016251 1 43350 69.345 47.881 1 27963 1752 10567 10856 43754 43754 PLTVLNK 7 1 0 Unmodified _PLTVLNK_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3;I3L2H5 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 392.7501 2 392.749996 783.485439 99391.87 0.30919 0.00012144 0.1153 4.5285E-05 0.4245 0.00016672 392.749985754706 396.757036101272 42.255 0.45898 42.255 41.997 42.456 -3.8147E-06 104 33 4 0 0 0 0.014014 1 22399 101.21 17.148 1 1.0759 1.0649 0 25791000 12730000 13061000 27964 1604 10568 10857 43755 43755 PLTVLNK 7 1 0 Unmodified _PLTVLNK_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3;I3L2H5 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 396.7574 2 392.749996 783.485439 95697.13 0.49456 0.00019424 0.39281 0.00015428 0.88737 0.00034851 392.750036545664 396.757128095681 40.96 0.23681 40.96 40.87 41.107 0 61 17 5 0 0 0 0.00095346 1 21992 137.83 34.547 1 1.2447 1.2685 0 30895000 12143000 18752000 27965 1604 10568 10857 43756 43756 PLVETIFER 9 0 1 Unmodified _PLVETIFER_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.3116 2 552.308406 1102.60226 80980.26 0.80685 0.00044563 0.19818 0.00010945 1.005 0.00055508 552.308123123584 557.312969665367 93.36 0.76086 93.36 93.04 93.801 0 227 64 5 0 0 0 0.0016784 1 56481 82.279 71.865 1 0.65399 0.6945 0 42368000 22582000 19786000 27966 804 10569 10858 43757 43757 PLVETIFER 9 0 1 Unmodified _PLVETIFER_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.3088 2 552.308406 1102.60226 81009.6 0.62219 0.00034364 0.25203 0.0001392 0.87421 0.00048284 552.30824155621 557.313066996136 92.378 0.76896 92.378 92.091 92.86 0 219 63 5 0 0 0 0.0011834 2 57167 88.819 78.405 1 0.71284 0.77941 0 30492000 18806000 11686000 27967 804 10569 10858 43758;43759 43759 PLVETIFER 9 0 1 Unmodified _PLVETIFER_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.3093 2 552.308406 1102.60226 81663.21 0.5076 0.00028035 -0.18978 -0.00010482 0.31782 0.00017554 552.307784176844 557.312678137804 106.26 0.50002 106.26 106.04 106.54 0 83 25 5 0 0 0 0.029116 2 60732 46.39 46.39 1 0.95167 0.82515 0 2072300 970470 1101800 27968 804 10569 10858 43760;43761 43761 PLVETIFER 9 0 1 Unmodified _PLVETIFER_ 0 0 0 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 552.3082 2 552.308406 1102.60226 82915.08 0.6292 0.00034751 0.21595 0.00011927 0.84516 0.00046679 552.308345078611 557.31279910171 106.08 0.4884 106.08 105.8 106.29 0 84 26 4 0 0 0 0.041466 1 59689 41.448 37.877 1 0.85478 0.75685 0 1910600 798080 1112600 27969 804 10569 10858 43762 43762 PLVLCGPPGSGK 12 1 0 Unmodified _PLVLCGPPGSGK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.3279 2 591.320991 1180.62743 NaN NaN NaN -0.84556 -0.0005 NaN NaN NaN NaN 61.003 0.24651 61.003 60.858 61.105 3.8147E-06 0 0 0 0.017146 1 34833 52.278 19.438 1 NaN NaN 0 2833700 0 2833700 27970 1729 10570 10859 43763 43763 PLVQTIFEGGK 11 1 0 Unmodified _PLVQTIFEGGK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;Q5JR91 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.835 2 594.834788 1187.65502 82171.64 0.72447 0.00043094 0.06983 4.1537E-05 0.7943 0.00047248 594.835096026599 598.84199842067 88.122 0.85145 88.122 87.597 88.449 0 186 74 5 0 0 0 7.9364E-08 1 53163 112.75 101.58 1 0.88321 0.8823 0 26512000 12961000 13551000 27971 626 10571 10860 43764 43764 PLVQTIFEGGK 11 1 0 Unmodified _PLVQTIFEGGK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1;Q5JR91 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.8347 2 594.834788 1187.65502 81215.73 0.51014 0.00030345 0.25338 0.00015072 0.76352 0.00045417 594.835085386506 598.84207017943 87.116 0.77435 87.116 86.608 87.382 0 215 66 4 0 0 0 3.7938E-10 3 53746 132.01 121.75 1 0.90611 0.91747 0 29152000 15411000 13741000 27972 626 10571 10860 43765;43766;43767 43766 PLVVFVLGGPGAGK 14 1 0 Unmodified _PLVVFVLGGPGAGK_ 0 0 0 Q5T0D2;B4DDL4;B2R6S5;P30085;B4DFW6;E9PJD2 Q5T0D2 Q5T0D2 CMPK1;CMPK UMP-CMP kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.9022 2 655.89518 1309.77581 NaN NaN NaN -0.11825 -7.7558E-05 NaN NaN NaN NaN 114.67 0.41684 114.67 114.49 114.9 0 0 0 0 1.7079E-15 1 72855 128.36 93.553 1 NaN NaN 0 2730200 0 2730200 27973 844 10572 10861 43768 43768 PLVVFVLGGPGAGK 14 1 0 Unmodified _PLVVFVLGGPGAGK_ 0 0 0 Q5T0D2;B4DDL4;B2R6S5;P30085;B4DFW6;E9PJD2 Q5T0D2 Q5T0D2 CMPK1;CMPK UMP-CMP kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.9025 2 655.89518 1309.77581 NaN NaN NaN 0.10367 6.7995E-05 NaN NaN NaN NaN 114.03 0.4845 114.03 113.86 114.35 0 0 0 0 5.0387E-06 1 74102 94.692 69.769 1 NaN NaN 0 3892000 0 3892000 27974 844 10572 10861 43769 43769 PLYIQK 6 1 0 Unmodified _PLYIQK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 381.2306 2 381.231439 760.448326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.895 1 33.895 33.395 34.395 0 0 0 0 0.046127 1 16902 75.94 35.965 1 27975 716 10573 10862 43770 43770 PLYLQYLER 9 0 1 Unmodified _PLYLQYLER_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6;H0YMN5 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.8306 2 597.829506 1193.64446 80024.34 0.77866 0.0004655 -0.41084 -0.00024561 0.36781 0.00021989 598.33095719882 603.333945255228 97.471 0.69151 97.471 97.16 97.852 0 193 53 7 0 0 0 0.0074668 2 60869 61.962 61.962 1 0.81034 0.81145 0 17137000 9594200 7543300 27976 288 10574 10863 43771;43772 43771 PLYVALAQR 9 0 1 Unmodified _PLYVALAQR_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;Q4VXU2;H0YB86;B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.8057 2 515.805834 1029.59712 84493.6 0.29443 0.00015187 0.63532 0.0003277 0.92975 0.00047957 515.806345332904 520.810186213704 72.282 0.68882 72.282 72.091 72.78 0 175 50 5 0 0 0 0.00068897 2 42310 114.72 109.99 1 1.8635 2.0713 0 74039000 23136000 50902000 27977 273;818 10575 10864 43773;43774 43774 PLYVALAQR 9 0 1 Unmodified _PLYVALAQR_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;Q4VXU2;H0YB86;B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.8101 2 515.805834 1029.59712 86310.2 0.36799 0.00018981 0.40334 0.00020805 0.77133 0.00039786 515.805806812965 520.810152048556 70.959 0.55217 70.959 70.787 71.34 0 174 40 7 0 0 0 0.0001739 1 42462 107.43 90.653 1 2.0349 2.3343 0 81113000 27791000 53323000 27978 273;818 10575 10864 43775 43775 PLYVALAQR 9 0 1 Unmodified _PLYVALAQR_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;Q4VXU2;H0YB86;B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867;Q59GZ7 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.8099 2 515.805834 1029.59712 85594.66 0.16483 8.5018E-05 0.36338 0.00018744 0.52821 0.00027245 515.805949547856 520.810058674146 82.424 0.44212 82.424 82.194 82.636 0 113 24 6 0 0 0 0.0018844 1 43914 79.597 70.009 1 1.386 1.1644 0 4833200 1756300 3076900 27979 273;818 10575 10864 43776 43776 PMCIPPSYADLGK 13 1 0 Oxidation (M) _PM(ox)CIPPSYADLGK_ PM(1)CIPPSYADLGK PM(64.44)CIPPSYADLGK 0 1 0 A0A0A0MR02;A0A024QZT0;P45880;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.8535 2 732.846713 1463.67887 70836.6 0.69014 0.00050577 -0.034989 -2.5642E-05 0.65516 0.00048013 732.846501170243 736.853849001028 71.626 1.6351 71.626 71.041 72.677 0 269 132 5 0 0 0 0.00015734 1 41593 64.439 57.836 1 2.7884 2.7436 0 23875000 6097700 17778000 27980 28 10576 10865 43777 43777 16 PMCIPPSYADLGK 13 1 0 Oxidation (M) _PM(ox)CIPPSYADLGK_ PM(1)CIPPSYADLGK PM(49.5)CIPPSYADLGK 0 1 0 A0A0A0MR02;A0A024QZT0;P45880;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8459 2 732.846713 1463.67887 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.393 1 71.393 70.893 71.893 0 0 0 0 0.0078438 1 41652 49.5 31.636 1 27981 28 10576 10865 43778 43778 16 PMCIPPSYADLGK 13 1 0 Oxidation (M) _PM(ox)CIPPSYADLGK_ PM(1)CIPPSYADLGK PM(52.79)CIPPSYADLGK 0 1 0 A0A0A0MR02;A0A024QZT0;P45880;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8466 2 732.846713 1463.67887 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.441 1 71.441 70.941 71.941 0 0 0 0 0.0055821 1 41690 52.79 25.675 1 27982 28 10576 10865 43779 43779 16 PMCIPPSYADLGK 13 1 0 Oxidation (M) _PM(ox)CIPPSYADLGK_ PM(1)CIPPSYADLGK PM(84.69)CIPPSYADLGK 0 1 0 A0A0A0MR02;A0A024QZT0;P45880;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.8539 2 732.846713 1463.67887 71127.74 0.6984 0.00051182 -0.025815 -1.8918E-05 0.67259 0.0004929 733.348014198862 736.853969205734 70.333 1.6041 70.333 69.774 71.378 0 321 126 5 0 0 0 7.3158E-05 2 42228 84.687 84.687 1 2.5975 2.6726 0 18012000 4101500 13910000 27983 28 10576 10865 43780;43781 43781 16 PMCIPPSYADLGK 13 1 0 Oxidation (M) _PM(ox)CIPPSYADLGK_ PM(1)CIPPSYADLGK PM(60.52)CIPPSYADLGK 0 1 0 A0A0A0MR02;A0A024QZT0;P45880;Q5JSD2;Q5JSD1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.8461 2 732.846713 1463.67887 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.254 1 70.254 69.754 70.754 0 0 0 0 0.0020273 1 41930 60.518 46.749 1 27984 28 10576 10865 43782 43782 16 PMCVESFSDYPPLGR 15 0 1 Oxidation (M) _PM(ox)CVESFSDYPPLGR_ PM(1)CVESFSDYPPLGR PM(119.76)CVESFSDYPPLGR 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 891.4022 2 885.894922 1769.77529 65128.67 0.5696 0.00050461 -0.023778 -2.1064E-05 0.54582 0.00048354 886.396098703991 890.899331412516 88.274 0.99345 88.274 87.849 88.843 0 367 79 8 0 0 0 1.0318E-10 2 53018 119.76 119.76 1 2.7367 3.0373 0 69157000 14981000 54176000 27985 1658;1790 10577 10866 43783;43784 43783 1439 PMCVESFSDYPPLGR 15 0 1 Oxidation (M) _PM(ox)CVESFSDYPPLGR_ PM(1)CVESFSDYPPLGR PM(67.38)CVESFSDYPPLGR 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 890.8986 2 885.894922 1769.77529 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.889 1 87.889 87.389 88.389 0 0 0 0 0.00071367 1 52999 67.385 54.405 1 27986 1658;1790 10577 10866 43785 43785 1439 PMCVESFSDYPPLGR 15 0 1 Oxidation (M) _PM(ox)CVESFSDYPPLGR_ PM(1)CVESFSDYPPLGR PM(108.35)CVESFSDYPPLGR 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 890.901 2 885.894922 1769.77529 64567.06 0.48204 0.00042704 0.11681 0.00010348 0.59885 0.00053052 885.895427252641 890.89936843546 87.467 0.85328 87.467 87.066 87.919 0 373 66 8 0 0 0 1.0296E-07 1 53702 108.35 106.47 1 2.709 3.1391 0 66375000 17761000 48614000 27987 1658;1790 10577 10866 43786 43786 1439 PMCVESFSDYPPLGR 15 0 1 Oxidation (M) _PM(ox)CVESFSDYPPLGR_ PM(1)CVESFSDYPPLGR PM(45.65)CVESFSDYPPLGR 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 886.3989 2 885.894922 1769.77529 65456.09 0.31922 0.00028279 0.62559 0.00055421 0.94481 0.000837 886.397537424094 890.899466999972 101.01 0.66046 101.01 100.62 101.28 0 161 44 5 0 0 0 0.0010556 1 57171 45.653 45.653 1 1.2674 1.0597 0 3685800 1622700 2063100 27988 1658;1790 10577 10866 43787 43787 1439 PMCVESFSDYPPLGR 15 0 1 Oxidation (M) _PM(ox)CVESFSDYPPLGR_ PM(1)CVESFSDYPPLGR PM(57.23)CVESFSDYPPLGR 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 885.8957 2 885.894922 1769.77529 65761.97 0.14226 0.00012602 0.58462 0.00051791 0.72687 0.00064393 885.895762424775 890.899461948435 100.87 0.60225 100.87 100.6 101.21 0 192 42 6 0 0 0 0.00021816 1 56297 57.225 57.225 1 1.2714 1.1237 0 3726900 1593400 2133600 27989 1658;1790 10577 10866 43788 43788 1439 PMCVESFSDYPPLGR 15 0 1 Unmodified _PMCVESFSDYPPLGR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 882.905 2 877.897465 1753.78038 65249.61 0.67218 0.00059011 0.46736 0.00041029 1.1395 0.0010004 878.399823225975 882.902066463236 101.43 0.72869 101.43 101.07 101.8 7.6294E-06 127 56 4 0 0 0 3.4688E-06 2 62145 97.911 94.59 1 1.7561 1.8378 0 10812000 3853400 6959000 27990 1658;1790 10577 10867 43789;43790 43789 PMCVESFSDYPPLGR 15 0 1 Unmodified _PMCVESFSDYPPLGR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.9033 2 877.897465 1753.78038 64916.03 0.48332 0.0004243 0.10387 9.1189E-05 0.58719 0.00051549 877.898219685992 882.902059951235 100.74 0.57782 100.74 100.45 101.03 7.6294E-06 173 44 6 0 0 0 4.5724E-07 2 63191 103.34 100.55 1 1.5142 1.5233 0 10941000 4246500 6694100 27991 1658;1790 10577 10867 43791;43792 43791 PMCVESFSDYPPLGR 15 0 1 Unmodified _PMCVESFSDYPPLGR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 883.4048 2 877.897465 1753.78038 63844.33 0.96792 0.00084973 0.049711 4.3641E-05 1.0176 0.00089338 878.399474086072 883.403181357027 113.56 0.71173 113.56 113.27 113.98 -7.6294E-06 185 34 8 0 0 0 3.9231E-05 3 66041 86.114 86.114 1 1.6945 1.4492 0 8729900 3309800 5420100 27992 1658;1790 10577 10867 43793;43794;43795 43793 PMCVESFSDYPPLGR 15 0 1 Unmodified _PMCVESFSDYPPLGR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 883.4033 2 877.897465 1753.78038 63937.5 0.34508 0.00030295 -0.1764 -0.00015486 0.16868 0.00014809 878.399522370612 882.902231919847 113.41 0.62916 113.41 113.14 113.77 7.6294E-06 182 30 9 0 0 0 4.4633E-06 2 65045 97.163 97.163 1 1.9119 1.5896 0 7510400 2785400 4725000 27993 1658;1790 10577 10867 43796;43797 43796 PMEAASAILSQADAR 15 0 1 Oxidation (M) _PM(ox)EAASAILSQADAR_ PM(1)EAASAILSQADAR PM(79.82)EAASAILSQADAR 0 1 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.8849 2 773.88013 1545.74571 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.887 1 68.887 68.387 69.387 0 0 0 0 0.00026361 1 39959 79.82 71.895 1 27994 125 10578 10868 43798 43798 111 PMEAASAILSQADAR 15 0 1 Oxidation (M) _PM(ox)EAASAILSQADAR_ PM(1)EAASAILSQADAR PM(72.96)EAASAILSQADAR 0 1 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.8848 2 773.88013 1545.74571 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.918 1 68.918 68.418 69.418 0 0 0 0 0.00060726 1 39979 72.958 57.386 1 27995 125 10578 10868 43799 43799 111 PMEAASAILSQADAR 15 0 1 Oxidation (M) _PM(ox)EAASAILSQADAR_ PM(1)EAASAILSQADAR PM(72.5)EAASAILSQADAR 0 1 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.8825 2 773.88013 1545.74571 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.937 1 68.937 68.437 69.437 0 0 0 0 0.0006304 1 39991 72.496 57.524 1 27996 125 10578 10868 43800 43800 111 PMEGNFEEIAR 11 0 1 Oxidation (M) _PM(ox)EGNFEEIAR_ PM(1)EGNFEEIAR PM(42.72)EGNFEEIAR 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.7983 2 654.798077 1307.5816 NaN NaN NaN 0.32852 0.00021512 NaN NaN NaN NaN 52.202 0.76208 52.202 51.806 52.568 3.8147E-06 0 0 0 0.017205 1 28868 42.718 36.415 1 NaN NaN 0 7928400 7928400 0 27997 1770 10579 10869 43801 43801 1640 PMEGNFEEIAR 11 0 1 Oxidation (M) _PM(ox)EGNFEEIAR_ PM(1)EGNFEEIAR PM(105.98)EGNFEEIAR 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.8003 2 654.798077 1307.5816 75176.64 1.0722 0.00070205 0.50036 0.00032763 1.5725 0.0010297 654.798128794809 659.802403335482 50.887 0.42363 50.887 50.666 51.089 0 90 34 4 0 0 0 8.3781E-06 1 28718 105.98 88.156 1 0.81618 0.80781 0 15415000 7982700 7432500 27998 1770 10579 10869 43802 43802 1640 PMNIQLVTSQIDAQR 15 0 1 Unmodified _PMNIQLVTSQIDAQR_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 857.4503 2 857.451253 1712.88795 68476.77 0.64811 0.00055572 -0.64539 -0.00055339 0.0027243 2.336E-06 857.449731999406 862.95629700443 112.66 0.37045 112.66 112.48 112.85 0 50 17 5 0 0 0 0.023716 1 64633 29.805 24.628 1 0.82689 0.72036 0 1805300 916720 888620 27999 1229 10580 10870 43803 43803 PNAQELPSMYQR 12 0 1 Oxidation (M) _PNAQELPSM(ox)YQR_ PNAQELPSM(1)YQR PNAQELPSM(72.85)YQR 0 1 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.3487 2 725.343183 1448.67181 NaN NaN NaN -0.11913 -8.6408E-05 NaN NaN NaN NaN 38.17 0.14253 38.17 38.075 38.218 0 0 0 0 0.00059012 1 19555 72.848 60.232 1 NaN NaN 0 5383800 0 5383800 28000 1328 10581 10871 43804 43804 1005 PNAQELPSMYQR 12 0 1 Oxidation (M) _PNAQELPSM(ox)YQR_ PNAQELPSM(1)YQR PNAQELPSM(93.56)YQR 0 1 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3483 2 725.343183 1448.67181 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.211 1 37.211 36.711 37.711 0 0 0 0 1.6137E-05 1 19287 93.561 77.363 1 28001 1328 10581 10871 43805 43805 1005 PNASVALHK 9 1 0 Unmodified _PNASVALHK_ 0 0 0 A8K2M0;P43686 A8K2M0 A8K2M0 PSMC4 26S protease regulatory subunit 6B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 315.5182 3 312.846898 935.518865 107536.8 -0.32141 -0.00010055 0.14148 4.4262E-05 -0.17993 -5.6291E-05 312.846855315742 315.518308799887 19.766 0.22377 19.766 19.689 19.913 0 22 8 5 0 0 0 0.03042 1 6121 30.797 26.958 1 3.3915 3.4076 0 7008200 1984000 5024200 28002 710 10582 10872 43806 43806 PNLADLAVYGVLR 13 0 1 Unmodified _PNLADLAVYGVLR_ 0 0 0 Q9H7Z7;B4DWP1;A6NHH0;B3KPZ2 Q9H7Z7 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.9039 2 700.898451 1399.78235 NaN NaN NaN -0.10354 -7.257E-05 NaN NaN NaN NaN 120.66 0.43662 120.66 120.4 120.83 0 0 0 0 0.00024023 1 77811 88.596 75.98 1 NaN NaN 0 2780200 0 2780200 28003 2041 10583 10873 43807 43807 PNLADLAVYGVLR 13 0 1 Unmodified _PNLADLAVYGVLR_ 0 0 0 Q9H7Z7;B4DWP1;A6NHH0;B3KPZ2 Q9H7Z7 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.9029 2 700.898451 1399.78235 NaN NaN NaN -0.31892 -0.00022353 NaN NaN NaN NaN 120.12 0.38745 120.12 119.9 120.29 0 0 0 0 3.3356E-09 1 79244 113.93 94.165 1 NaN NaN 0 4311900 0 4311900 28004 2041 10583 10873 43808 43808 PNLGAIAEYK 10 1 0 Unmodified _PNLGAIAEYK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.3 2 538.292756 1074.57096 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.313 1 77.313 76.813 77.813 0 0 0 0 1.0287E-05 1 41361 98.048 69.83 1 28005 2070 10584 10874 43809 43809 PNLLYQK 7 1 0 Unmodified _PNLLYQK_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.2592 2 438.252903 874.491253 91496.15 0.067648 2.9647E-05 -0.14216 -6.2303E-05 -0.074515 -3.2656E-05 438.2526895463 442.259911735251 40.609 0.5868 40.609 40.37 40.956 0 189 52 5 0 0 0 0.014567 1 21185 99.919 81.137 1 1.1076 1.1896 0 39548000 18103000 21445000 28006 1820 10585 10875 43810 43810 PNLLYQK 7 1 0 Unmodified _PNLLYQK_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.2599 2 438.252903 874.491253 92178.38 0.4354 0.00019082 -0.29727 -0.00013028 0.13813 6.0534E-05 438.252552042928 442.259905990814 39.651 0.53104 39.651 39.359 39.89 0 178 45 6 0 0 0 0.026711 1 20903 76.847 49.884 1 1.1161 1.2553 0 71977000 33823000 38154000 28007 1820 10585 10875 43811 43811 PNLLYQK 7 1 0 Unmodified _PNLLYQK_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 442.2598 2 438.252903 874.491253 91798.23 -0.16905 -7.4086E-05 0.20039 8.782E-05 0.031338 1.3734E-05 438.252830107189 442.259961678695 45.768 1.0565 45.768 45.408 46.464 -3.8147E-06 316 79 6 0 0 0 0.057613 1 21800 51.572 34.011 1 1.9963 1.5961 0 8901700 2981200 5920500 28008 1820 10585 10875 43812 43812 PNLLYQK 7 1 0 Unmodified _PNLLYQK_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 442.2599 2 438.252903 874.491253 90085.93 0.091599 4.0144E-05 -0.077052 -3.3768E-05 0.014547 6.3752E-06 438.252710923152 442.259831438777 45.792 1.214 45.792 45.371 46.585 0 270 76 6 0 0 0 0.030033 1 21307 69.383 51.617 1 2.1117 1.7246 0 8072200 2375100 5697100 28009 1820 10585 10875 43813 43813 PNLNLQVLSNPEFLAEGTAIK 21 1 0 Unmodified _PNLNLQVLSNPEFLAEGTAIK_ 0 0 0 O60701;Q9NQ81 O60701 O60701 UGDH;GDH UDP-glucose 6-dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1138.6219 2 1134.61535 2267.21615 NaN NaN NaN -0.39528 -0.0004485 NaN NaN NaN NaN 126.58 0.23538 126.58 126.5 126.73 0 0 0 0 2.1947E-06 1 84457 64.65 55.117 1 NaN NaN 0 4472700 0 4472700 28010 1397 10586 10876 43814 43814 PNPNQIISVGSK 12 1 0 Unmodified _PNPNQIISVGSK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.3546 2 627.346052 1252.67755 76201.39 0.38603 0.00024218 0.23136 0.00014514 0.61739 0.00038732 627.346145089543 631.353127097099 58.292 0.7394 58.292 57.935 58.675 0 271 58 6 0 0 0 0.00093495 3 32900 63.624 44.353 1 0.67353 0.68636 0 28090000 13966000 14124000 28011 168 10587 10877 43815;43816;43817 43816 PNPNQIISVGSK 12 1 0 Unmodified _PNPNQIISVGSK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3533 2 627.346052 1252.67755 76295.41 0.55591 0.00034875 0.67137 0.00042118 1.2273 0.00076993 627.346036571326 631.856210767007 57.423 0.78558 57.423 56.994 57.78 0 263 59 6 0 0 0 0.00021365 3 33066 81.525 51.358 1 0.9032 0.97727 0 38653000 20859000 17794000 28012 168 10587 10877 43818;43819;43820 43820 PNPNQISVNNVK 12 1 0 Unmodified _PNPNQISVNNVK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3605 2 662.354408 1322.69426 78033.28 0.71736 0.00047515 -0.19019 -0.00012598 0.52717 0.00034917 662.855940049967 666.361245692968 40.322 0.19933 40.322 40.2 40.399 0 46 16 4 0 0 0 0.015684 1 21067 42.718 32.487 1 0.93008 0.93157 0 9822100 4614000 5208100 28013 1223 10588 10878 43821 43821 PNTLTLVHVR 10 0 1 Unmodified _PNTLTLVHVR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 387.2322 3 383.89614 1148.66659 101270.3 0.59815 0.00022963 -0.94945 -0.00036449 -0.35129 -0.00013486 383.896091165626 387.231971691482 54.593 0.35096 54.593 54.39 54.741 0 107 28 6 0 0 0 0.01284 1 31138 31.843 25.183 1 1.3431 1.3453 0 18639000 5495800 13143000 28014 39 10589 10879 43822 43822 PQEQLTLEPYER 12 0 1 Unmodified _PQEQLTLEPYER_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.8827 2 751.877913 1501.74127 68583.06 0.61865 0.00046515 0.085162 6.4032E-05 0.70381 0.00052918 751.878025486888 756.882072414773 72.049 0.90109 72.049 71.662 72.563 0 450 71 10 0 0 0 1.1856E-37 3 41957 179.19 179.19 1 0.62824 0.71013 0 102780000 64518000 38265000 28015 1506;683 10590 10880 43823;43824;43825 43825 PQEQLTLEPYER 12 0 1 Unmodified _PQEQLTLEPYER_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.8821 2 751.877913 1501.74127 69144.7 0.57581 0.00043294 0.011609 8.7287E-06 0.58742 0.00044167 751.877804045102 756.882033248652 70.904 1.0177 70.904 70.471 71.489 0 422 76 8 0 0 0 1.8396E-06 3 42241 111.86 111.86 1 0.63642 0.72701 0 150400000 90462000 59937000 28016 1506;683 10590 10880 43826;43827;43828 43828 PQEQLTLEPYER 12 0 1 Unmodified _PQEQLTLEPYER_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.883 2 751.877913 1501.74127 69017.14 0.61914 0.00046551 -0.53923 -0.00040544 0.079903 6.0077E-05 751.876939187178 756.882265805006 82.559 1.3764 82.559 81.933 83.309 7.6294E-06 474 83 10 0 0 0 1.26E-18 2 44830 149.23 149.23 1 0.89137 0.75687 0 33466000 15946000 17520000 28017 1506;683 10590 10880 43829;43830 43829 PQEQLTLEPYER 12 0 1 Unmodified _PQEQLTLEPYER_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;A6NHQ2 Q96BS4;A6NHQ2 Q96BS4 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.8835 2 751.877913 1501.74127 68268.02 0.45345 0.00034094 -0.6629 -0.00049842 -0.20944 -0.00015747 751.87702926465 756.882163260301 82.797 1.5562 82.797 81.844 83.4 0 446 91 10 0 0 0 6.6834E-05 2 44104 97.734 90.606 1 0.92496 0.80684 0 30247000 15625000 14622000 28018 1506;683 10590 10880 43831;43832 43831 PQFYEIK 7 1 0 Unmodified _PQFYEIK_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7521 2 462.744911 923.475269 89351.19 0.26269 0.00012156 0.17743 8.2104E-05 0.44012 0.00020366 462.744935748397 466.751929316007 56.526 0.72855 56.526 56.244 56.973 0 229 66 5 0 0 0 0.026999 1 31888 84.916 62.293 1 0.85661 0.8592 0 26836000 13034000 13802000 28019 2000 10591 10881 43833 43833 PQFYEIK 7 1 0 Unmodified _PQFYEIK_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7521 2 462.744911 923.475269 88796.02 0.10978 5.0801E-05 0.51827 0.00023983 0.62805 0.00029063 462.745035647821 466.752081342836 55.467 0.659 55.467 55.085 55.744 3.8147E-06 195 47 6 0 0 0 0.013988 1 31718 101.28 75.175 1 0.85183 0.90348 0 35967000 20060000 15907000 28020 2000 10591 10881 43834 43834 PQFYEIK 7 1 0 Unmodified _PQFYEIK_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 466.7518 2 462.744911 923.475269 88990.88 0.42534 0.00019682 -0.83743 -0.00038752 -0.4121 -0.00019069 462.744260808249 466.751669052128 65.287 0.73177 65.287 64.966 65.698 0 158 55 4 0 0 0 0.03305 1 33671 64.567 47.006 1 1.3911 1.134 0 2658600 1102900 1555700 28021 2000 10591 10881 43835 43835 PQGIPVAALLEPDEVLK 17 1 0 Unmodified _PQGIPVAALLEPDEVLK_ 0 0 0 Q9HBB9;Q8WUM5;Q9HC39;I3L2C7;P57678 Q9HBB9 Q9HBB9 GEMIN4 Gem-associated protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.5208 2 895.008927 1788.0033 NaN NaN NaN -0.0077149 -6.9049E-06 NaN NaN NaN NaN 126.33 0.26633 126.33 126.27 126.53 7.6294E-06 0 0 0 0.014092 1 84303 41.54 28.113 1 NaN NaN 0 2860300 0 2860300 28022 1940 10592 10882 43836 43836 PQGLDPVEILQER 13 0 1 Unmodified _PQGLDPVEILQER_ 0 0 0 P51531;A0A0U1RQZ9;F6VDE0;A0A0U1RRJ8 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.4067 2 747.401555 1492.78856 69922.04 0.73756 0.00055126 0.53971 0.00040338 1.2773 0.00095463 747.402395222999 752.406142388674 107.07 0.47968 107.07 106.88 107.35 0 90 32 4 0 0 0 0.0030492 1 68431 51.268 43.887 1 1.1758 1.1629 0 12480000 6318800 6161600 28023 1595 10593 10883 43837 43837 PQGLDPVEILQER 13 0 1 Unmodified _PQGLDPVEILQER_ 0 0 0 P51531;A0A0U1RQZ9;F6VDE0;A0A0U1RRJ8 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.9072 2 747.401555 1492.78856 69968.25 0.99791 0.00074584 -0.59056 -0.00044139 0.40735 0.00030446 747.902436677648 752.40529543773 119.12 0.27754 119.12 118.95 119.23 0 46 11 5 0 0 0 0.0010478 1 70417 59.418 53.185 1 1.849 1.6269 0 1648200 675120 973100 28024 1595 10593 10883 43838 43838 PQLGMIDR 8 0 1 Oxidation (M) _PQLGM(ox)IDR_ PQLGM(1)IDR PQLGM(40.78)IDR 0 1 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2448 2 473.244752 944.474951 NaN NaN NaN 0.10511 4.9742E-05 NaN NaN NaN NaN 34.524 0.70107 34.524 34.171 34.872 0 0 0 0 0.025886 1 17315 40.778 16.146 1 NaN NaN 0 12601000 12601000 0 28025 139 10594 10884 43839 43839 127 PQLQGIPVLVLGNK 14 1 0 Unmodified _PQLQGIPVLVLGNK_ 0 0 0 B4DQT8;A0A024R2D4;B4E1J8;Q9NVJ2;B2R7U5;A0A024R977;Q96BM9 B4DQT8 B4DQT8 ARL8B;ARL8A ADP-ribosylation factor-like protein 8B;ADP-ribosylation factor-like protein 8A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.4584 2 738.450851 1474.88715 NaN NaN NaN -0.23483 -0.00017341 NaN NaN NaN NaN 115.92 0.43438 115.92 115.71 116.14 7.6294E-06 0 0 0 3.5348E-22 1 73806 135.55 120.28 1 NaN NaN 0 8093400 0 8093400 28026 109 10595 10885 43840 43840 PQLQGIPVLVLGNK 14 1 0 Unmodified _PQLQGIPVLVLGNK_ 0 0 0 B4DQT8;A0A024R2D4;B4E1J8;Q9NVJ2;B2R7U5;A0A024R977;Q96BM9 B4DQT8 B4DQT8 ARL8B;ARL8A ADP-ribosylation factor-like protein 8B;ADP-ribosylation factor-like protein 8A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.4584 2 738.450851 1474.88715 73980.24 0.86724 0.00064042 0.014263 1.0532E-05 0.88151 0.00065095 738.450659411504 742.457869583911 115.36 0.43979 115.36 115.15 115.59 0 96 27 5 0 0 0 4.6887E-21 2 75149 142.43 142.43 1 2.226 2.2241 0 15210000 5142400 10068000 28027 109 10595 10885 43841;43842 43841 PQNEYIELHR 10 0 1 Unmodified _PQNEYIELHR_ 0 0 0 Q5J7U2;O95478;A0A0A0MQZ6 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.8904 3 433.554443 1297.6415 92196.25 0.072119 3.1267E-05 -0.048423 -2.0994E-05 0.023695 1.0273E-05 433.55430109564 436.890455570399 39.167 0.53103 39.167 38.908 39.439 0 151 41 7 0 0 0 0.0031215 2 20206 45.433 38.068 1 0.91728 0.97309 0 41978000 19951000 22027000 28028 1427 10596 10886 43843;43844 43843 PQNEYIELHR 10 0 1 Unmodified _PQNEYIELHR_ 0 0 0 Q5J7U2;O95478;A0A0A0MQZ6 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.8326 2 649.828026 1297.6415 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.132 1 39.132 38.632 39.632 0 0 0 0 4.1197E-05 1 20228 89.08 62.407 1 28029 1427 10596 10886 43845 43845 PQNEYIELHR 10 0 1 Unmodified _PQNEYIELHR_ 0 0 0 Q5J7U2;O95478;A0A0A0MQZ6 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.5545 3 433.554443 1297.6415 92347.34 -0.094662 -4.1041E-05 0.0017942 7.7786E-07 -0.092867 -4.0263E-05 433.554414100152 436.890365217338 37.953 0.32417 37.953 37.795 38.12 0 130 24 8 0 0 0 7.6015E-06 2 19853 87.298 87.298 1 0.88698 1.0273 0 66921000 35019000 31902000 28030 1427 10596 10886 43846;43847 43847 PQNLLIDDK 9 1 0 Unmodified _PQNLLIDDK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.297 2 528.290214 1054.56587 NaN NaN NaN 0.11673 6.1666E-05 NaN NaN NaN NaN 52.865 0.63592 52.865 52.58 53.216 0 0 0 0 0.00075678 1 29495 89.886 56.887 1 NaN NaN 0 47760000 0 47760000 28031 25 10597 10887 43848 43848 PQNLLIDDK 9 1 0 Unmodified _PQNLLIDDK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.2972 2 528.290214 1054.56587 83834.48 0.22625 0.00011953 -0.32572 -0.00017207 -0.099466 -5.2547E-05 528.28997851445 532.297142727911 51.554 0.842 51.554 51.301 52.143 0 204 65 5 0 0 0 0.0002392 2 29189 105.1 72.125 1 0.99412 1.1126 0 109560000 54064000 55492000 28032 25 10597 10887 43849;43850 43849 PQNLLIDDK 9 1 0 Unmodified _PQNLLIDDK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.2968 2 528.290214 1054.56587 83326.41 0.2584 0.00013651 -0.40039 -0.00021152 -0.14199 -7.5012E-05 528.289749037987 532.297219101752 60.259 0.61261 60.259 59.889 60.502 -3.8147E-06 124 43 4 0 0 0 0.0010883 1 30844 90.15 58.729 1 1.1083 0.92337 0 2250300 1107200 1143100 28033 25 10597 10887 43851 43851 PQNLLIDDK 9 1 0 Unmodified _PQNLLIDDK_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 528.2902 2 528.290214 1054.56587 84920.21 0.31635 0.00016713 -0.13998 -7.3951E-05 0.17637 9.3174E-05 528.290063326535 532.297300443588 60.618 0.65745 60.618 60.392 61.049 3.8147E-06 122 54 4 0 0 0 0.04756 1 30353 39.01 22.339 1 1.2288 1.0172 0 1640200 579080 1061100 28034 25 10597 10887 43852 43852 PQPVNTSSVTVK 12 1 0 Unmodified _PQPVNTSSVTVK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.846 2 628.845884 1255.67722 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.818 1 36.818 36.318 37.318 3.8147E-06 0 0 0 0.030341 1 18660 45.598 14.226 1 28035 895 10598 10888 43853 43853 PQQAAGMLSPK 11 1 0 Oxidation (M) _PQQAAGM(ox)LSPK_ PQQAAGM(1)LSPK PQQAAGM(56.63)LSPK 0 1 0 E7ETY2;B4DRA2;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.3029 2 572.294973 1142.57539 86693.84 0.57774 0.00033064 0.53299 0.00030503 1.1107 0.00063566 572.295286509773 576.302289136968 21.409 0.39157 21.409 21.166 21.558 0 53 18 4 0 0 0 0.0025219 1 7702 56.632 33.11 1 0.50224 0.50328 0 7621100 4811400 2809600 28036 1712;1225 10599 10889 43854 43854 936 PQQAAGMLSPK 11 1 0 Oxidation (M) _PQQAAGM(ox)LSPK_ PQQAAGM(1)LSPK PQQAAGM(62.46)LSPK 0 1 0 E7ETY2;B4DRA2;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.295 2 572.294973 1142.57539 83318.6 0.49727 0.00028459 -0.28595 -0.00016365 0.21132 0.00012094 572.294786333733 576.302085180969 21.36 0.23932 21.36 21.225 21.464 0 28 10 4 0 0 0 0.0010156 1 7549 62.463 30.143 1 0.55688 0.5666 0 9185400 5863000 3322300 28037 1712;1225 10599 10889 43855 43855 936 PQQAAGMLSPK 11 1 0 Unmodified _PQQAAGMLSPK_ 0 0 0 E7ETY2;B4DRA2;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.2994 2 564.297516 1126.58048 NaN NaN NaN -1.3774 -0.00077724 NaN NaN NaN NaN 40.257 0.27951 40.257 40.2 40.48 0 0 0 0 0.045501 1 18536 45.598 30.822 1 NaN NaN 0 756210 756210 0 28038 1712;1225 10599 10890 43856 43856 PQQIQALMDEVTK 13 1 0 Oxidation (M) _PQQIQALM(ox)DEVTK_ PQQIQALM(1)DEVTK PQQIQALM(77.06)DEVTK 0 1 0 A8K492;P56192;H0YIP0;H0YI94 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.8947 2 758.887423 1515.76029 NaN NaN NaN -0.10718 -8.1335E-05 NaN NaN NaN NaN 68.01 0.39879 68.01 67.789 68.188 0 0 0 0 0.00037512 1 40294 77.062 60.037 1 NaN NaN 0 8364100 0 8364100 28039 732 10600 10891 43857 43857 569 PQSSSTEPARK 11 1 1 Unmodified _PQSSSTEPARK_ 0 0 1 Q7Z4V5;Q59H67;A0A087WT54 Q7Z4V5 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.3051 2 594.304384 1186.59421 76016.46 0.36019 0.00021406 -0.13081 -7.7744E-05 0.22938 0.00013632 594.304105122908 603.315452918406 17.386 0.35178 17.386 17.225 17.577 0 38 11 6 0 0 0 0.027986 1 4556 45.68 5.6786 1 0.43036 0.49259 0 26047000 16772000 9275000 28040 1877 10601 10892 43858 43858 PQTGNSIPLTATNFR 15 0 1 Unmodified _PQTGNSIPLTATNFR_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.9246 2 808.923186 1615.83182 NaN NaN NaN 0.63983 0.00051757 NaN NaN NaN NaN 80.27 0.26825 80.27 80.06 80.328 7.6294E-06 0 0 0 0.016076 1 48901 58.674 43.984 1 NaN NaN 0 4433300 4433300 0 28041 135 10602 10893 43859 43859 PQTGNSIPLTATNFR 15 0 1 Unmodified _PQTGNSIPLTATNFR_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 813.9296 2 808.923186 1615.83182 69740.37 0.63145 0.00051079 1.0687 0.00086447 1.7001 0.0013753 808.923347065862 813.928285533207 93.173 0.28433 93.173 93.025 93.309 -7.6294E-06 45 16 5 0 0 0 0.027554 1 51989 28.327 24.902 1 1.6963 1.5002 0 1358800 413410 945380 28042 135 10602 10893 43860 43860 PQYQTWEEFSR 11 0 1 Unmodified _PQYQTWEEFSR_ 0 0 0 P49458;Q6P2S0;Q659G3;E9PE20;A0A024R3P3 P49458 P49458 SRP9;DKFZp564M2223 Signal recognition particle 9 kDa protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.8403 2 735.836048 1469.65754 NaN NaN NaN -0.2391 -0.00017594 NaN NaN NaN NaN 74.46 0.15944 74.46 74.363 74.523 0 0 0 0 0.044234 1 44778 45.972 29.748 1 NaN NaN 0 5158900 0 5158900 28043 1582 10603 10894 43861 43861 PQYQTWEEFSR 11 0 1 Unmodified _PQYQTWEEFSR_ 0 0 0 P49458;Q6P2S0;Q659G3;E9PE20;A0A024R3P3 P49458 P49458 SRP9;DKFZp564M2223 Signal recognition particle 9 kDa protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.8405 2 735.836048 1469.65754 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.355 1 74.355 73.855 74.855 0 0 0 0 0.017592 1 44735 54.608 38.383 1 28044 1582 10603 10894 43862 43862 PQYQTWEEFSR 11 0 1 Unmodified _PQYQTWEEFSR_ 0 0 0 P49458;Q6P2S0;Q659G3;E9PE20;A0A024R3P3 P49458 P49458 SRP9;DKFZp564M2223 Signal recognition particle 9 kDa protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.8374 2 735.836048 1469.65754 NaN NaN NaN 0.70759 0.00052067 NaN NaN NaN NaN 86.773 0.48553 86.773 86.529 87.014 0 0 0 0 0.013015 1 46796 55.314 51.297 1 NaN NaN 0 723220 723220 0 28045 1582 10603 10894 43863 43863 PRPLNTWK 8 1 1 Unmodified _PRPLNTWK_ 0 0 1 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567;A0A0A6YYI9;A0A0S2Z5V2;F8WDX3;A0A0A0MSL8;B8ZZ74 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14;RBM14-RBM4 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 337.8632 3 337.86266 1010.56615 103180.3 0.20912 7.0655E-05 0.094976 3.2089E-05 0.3041 0.00010274 337.8627066739 343.8700853022 26.17 0.3682 26.17 26.02 26.389 0 56 18 5 0 0 0 0.018134 1 11658 47.657 33.888 1 1.1948 1.3642 0 20928000 10741000 10187000 28046 571 10604 10895 43864 43864 PRPPPGPWDVPSPGLPVSAPILVR 24 0 2 Unmodified _PRPPPGPWDVPSPGLPVSAPILVR_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.4808 3 834.472426 2500.39545 67734.77 0.92286 0.0007701 -0.071579 -5.973E-05 0.85128 0.00071037 834.806252325234 841.47932238242 123.07 0.89886 123.07 122.69 123.59 0 344 67 8 0 0 0 1.0395E-09 3 79694 60.278 60.278 1 1.1798 1.2839 0 14153000 7104300 7048500 28047 1914 10605 10896 43865;43866;43867 43865 PRPPPGPWDVPSPGLPVSAPILVR 24 0 2 Unmodified _PRPPPGPWDVPSPGLPVSAPILVR_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 841.1452 3 834.472426 2500.39545 67721.57 0.86548 0.00072222 0.19005 0.00015859 1.0555 0.00088081 834.806853470979 841.479137734569 122.26 0.8405 122.26 121.85 122.69 0 298 63 6 0 0 0 1.2912E-09 3 81019 59.814 59.814 1 1.2875 1.3622 0 14629000 5616900 9012200 28048 1914 10605 10896 43868;43869;43870 43868 PRPPPGPWDVPSPGLPVSAPILVR 24 0 2 Unmodified _PRPPPGPWDVPSPGLPVSAPILVR_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.8076 3 834.472426 2500.39545 66423.45 0.99105 0.00082701 -0.39528 -0.00032985 0.59577 0.00049715 834.806404694516 841.478635305978 134.07 0.44289 134.07 133.88 134.33 0 137 19 12 0 0 0 1.5005E-09 1 81705 59.429 59.429 1 1.4877 1.2145 0 36964000 15110000 21854000 28049 1914 10605 10896 43871 43871 PRPPPGPWDVPSPGLPVSAPILVR 24 0 2 Unmodified _PRPPPGPWDVPSPGLPVSAPILVR_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 834.8074 3 834.472426 2500.39545 66623.13 1.2116 0.001011 0.22941 0.00019143 1.441 0.0012024 834.806738484074 841.479215693837 133.87 0.54353 133.87 133.63 134.17 0 179 26 11 0 0 0 9.4906E-12 1 80646 63.376 63.376 1 1.4377 1.3361 0 27065000 10715000 16350000 28050 1914 10605 10896 43872 43872 PRPPQGLVR 9 0 2 Unmodified _PRPPQGLVR_ 0 0 1 Q58F09;Q13724;A8K9K4 Q58F09 Q58F09 GCS1;MOGS Mannosyl-oligosaccharide glucosidase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 347.2137 3 340.541809 1018.6036 NaN NaN NaN -0.44103 -0.00015019 NaN NaN NaN NaN 25.366 0.38976 25.366 25.153 25.543 0 0 0 0 0.044115 1 11024 48.794 19.321 1 NaN NaN 0 2609000 0 2609000 28051 1720 10606 10897 43873 43873 PSAAAAAIAVAAAEEER 17 0 1 Unmodified _PSAAAAAIAVAAAEEER_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.914 2 799.412651 1596.81075 70195.99 1.0047 0.00080316 -0.23228 -0.00018569 0.7724 0.00061747 799.91389081446 804.41665705584 93.744 0.77023 93.744 93.365 94.135 -7.6294E-06 265 68 6 0 0 0 2.4485E-25 2 56866 145.31 145.31 1 0.76309 0.77626 0 29716000 16974000 12742000 28052 876 10607 10898 43874;43875 43875 PSAAAAAIAVAAAEEER 17 0 1 Unmodified _PSAAAAAIAVAAAEEER_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.4176 2 799.412651 1596.81075 69166.72 0.80913 0.00064683 -0.16361 -0.00013079 0.64552 0.00051604 799.412567018541 804.416761368576 92.864 0.54532 92.864 92.587 93.132 0 192 44 7 0 0 0 4.7623E-34 2 57591 151.54 151.54 1 0.81802 0.84049 0 21202000 9581500 11620000 28053 876 10607 10898 43876;43877 43877 PSAAAAAIAVAAAEEER 17 0 1 Unmodified _PSAAAAAIAVAAAEEER_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 799.4144 2 799.412651 1596.81075 69104.3 0.73864 0.00059048 0.44403 0.00035496 1.1827 0.00094544 799.413037478168 804.417416290214 107.83 0.46555 107.83 107.64 108.11 0 127 25 6 0 0 0 0.00034597 2 61786 48.527 48.527 1 1.2636 1.0602 0 4181600 1646800 2534700 28054 876 10607 10898 43878;43879 43879 PSAAAAAIAVAAAEEER 17 0 1 Unmodified _PSAAAAAIAVAAAEEER_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.9146 2 799.412651 1596.81075 68459.22 0.58624 0.00046864 0.29364 0.00023474 0.87988 0.00070338 799.413218781867 804.417410519684 107.8 0.46613 107.8 107.58 108.04 0 103 23 6 0 0 0 0.0047919 2 60828 35.118 35.118 1 1.2796 1.1315 0 3948600 1704600 2244000 28055 876 10607 10898 43880;43881 43881 PSAAAAAIAVAAAEEERR 18 0 2 Unmodified _PSAAAAAIAVAAAEEERR_ 0 0 1 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.647 3 585.31123 1752.91186 83688.98 0.43598 0.00025519 -0.011803 -6.9084E-06 0.42418 0.00024828 585.311473888415 591.983368951871 95.479 0.36208 95.479 95.336 95.698 0 64 24 5 0 0 0 0.042046 2 52661 13.627 9.5255 1 1.513 1.3528 0 2170800 1000800 1170000 28056 876 10608 10899 43882;43883 43883 PSAAGINLMIGSTR 14 0 1 Oxidation (M) _PSAAGINLM(ox)IGSTR_ PSAAGINLM(1)IGSTR PSAAGINLM(90.43)IGSTR 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3735 2 702.369201 1402.72385 73073.08 0.85931 0.00060355 0.4602 0.00032323 1.3195 0.00092678 702.368995353439 707.373669403155 79.535 0.57256 79.535 79.252 79.825 0 192 50 6 0 0 0 3.2651E-05 1 47253 90.434 81.947 1 1.2588 1.3466 0 45258000 16845000 28413000 28057 1691 10609 10900 43884 43884 1519 PSAAGINLMIGSTR 14 0 1 Oxidation (M) _PSAAGINLM(ox)IGSTR_ PSAAGINLM(1)IGSTR PSAAGINLM(68.54)IGSTR 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.8544 2 702.369201 1402.72385 73401.83 0.47848 0.00033607 0.30661 0.00021535 0.78509 0.00055142 702.369678009634 707.373402465289 78.605 0.66599 78.605 78.169 78.835 -7.6294E-06 203 56 7 0 0 0 0.00058035 1 47682 68.536 62.231 1 1.0682 1.2209 0 89312000 39310000 50002000 28058 1691 10609 10900 43885 43885 1519 PSASTQALSSSVSSSK 16 1 0 Unmodified _PSASTQALSSSVSSSK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.3887 2 762.381017 1522.74748 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.246 1 34.246 33.746 34.746 0 0 0 0 0.027269 1 17115 42.095 26.205 1 28059 1770 10610 10901 43886 43886 PSASTQALSSSVSSSK 16 1 0 Unmodified _PSASTQALSSSVSSSK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.3843 2 762.381017 1522.74748 71664.66 0.64427 0.00049118 0.54351 0.00041436 1.1878 0.00090553 762.381661895371 766.388360833465 33.526 0.18812 33.526 33.442 33.63 0 43 14 5 0 0 0 1.1246E-08 2 16818 107.37 107.37 1 0.83582 0.82806 0 5927900 3263600 2664300 28060 1770 10610 10901 43887;43888 43888 PSATGYLGSVAAK 13 1 0 Unmodified _PSATGYLGSVAAK_ 0 0 0 B3KR89;B9EGQ5;M0QXA7;O95785 B3KR89 B3KR89 WIZ Protein Wiz MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.3271 2 611.327328 1220.6401 79975.02 0.45811 0.00028005 0.66955 0.00040931 1.1277 0.00068937 611.327469199998 615.33484223213 58.978 0.41279 58.978 58.782 59.195 0 88 32 4 0 0 0 0.00014095 2 33558 82.171 74.525 1 0.71597 0.70381 0 8698800 4547100 4151800 28061 932 10611 10902 43889;43890 43890 PSATGYLGSVAAK 13 1 0 Unmodified _PSATGYLGSVAAK_ 0 0 0 B3KR89;B9EGQ5;M0QXA7;O95785 B3KR89 B3KR89 WIZ Protein Wiz MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.3277 2 611.327328 1220.6401 80221.08 0.4326 0.00026446 0.071613 4.3779E-05 0.50421 0.00030824 611.327014219356 615.334957259898 69.168 0.40622 69.168 68.922 69.328 0 96 28 7 0 0 0 0.003053 2 35435 51.252 46.05 1 1.1233 0.87464 0 2193300 963730 1229500 28062 932 10611 10902 43891;43892 43892 PSDNLIVCGR 10 0 1 Unmodified _PSDNLIVCGR_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5;Q86X79;Q05BL3;Q6PKI5;Q6PIN4;F8VZ56 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.7844 2 565.784773 1129.55499 NaN NaN NaN -0.37038 -0.00020955 NaN NaN NaN NaN 46.914 0.2452 46.914 46.694 46.939 0 0 0 0 0.0018662 1 25367 83.623 58.804 1 NaN NaN 0 11622000 11622000 0 28063 339 10612 10903 43893 43893 PSDNLIVCGR 10 0 1 Unmodified _PSDNLIVCGR_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5;Q86X79;Q05BL3;Q6PKI5;Q6PIN4;F8VZ56 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.7846 2 565.784773 1129.55499 NaN NaN NaN 0.93951 0.00053156 NaN NaN NaN NaN 46.103 0.48855 46.103 45.814 46.303 0 0 0 0 0.003539 1 25227 76.17 58.774 1 NaN NaN 0 16165000 16165000 0 28064 339 10612 10903 43894 43894 PSDNLIVCGR 10 0 1 Unmodified _PSDNLIVCGR_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5;Q86X79;Q05BL3;Q6PKI5;Q6PIN4;F8VZ56 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.7894 2 565.784773 1129.55499 80329.8 0.60603 0.00034288 -0.25021 -0.00014157 0.35582 0.00020132 565.784633113286 570.788852978526 53.783 0.79877 53.783 53.45 54.248 0 313 62 7 0 0 0 0.0006376 2 26684 83.647 74.734 1 1.2602 1.0808 0 6214200 2746900 3467300 28065 339 10612 10903 43895;43896 43895 PSDNLIVCGR 10 0 1 Unmodified _PSDNLIVCGR_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5;Q86X79;Q05BL3;Q6PKI5;Q6PIN4;F8VZ56 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.7848 2 565.784773 1129.55499 80226.66 0.37893 0.00021439 0.12535 7.092E-05 0.50428 0.00028531 565.784796957194 570.789007959976 54.128 0.72101 54.128 53.809 54.53 0 280 52 7 0 0 0 1.4773E-05 2 26314 101.65 94.079 1 1.334 1.1121 0 6762400 2759200 4003200 28066 339 10612 10903 43897;43898 43898 PSDSVHITNDDER 13 0 1 Unmodified _PSDSVHITNDDER_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.3359 2 742.834234 1483.65391 72395.66 0.4379 0.00032529 -0.023456 -1.7424E-05 0.41444 0.00030786 743.335350242522 747.838451735387 22.187 0.1846 22.187 22.124 22.309 0 25 8 4 0 0 0 0.00016144 2 8259 87.298 66.994 1 1.523 1.5632 0 4977100 2408800 2568300 28067 684 10613 10904 43899;43900 43899 PSDSVHITNDDER 13 0 1 Unmodified _PSDSVHITNDDER_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.8944 3 495.558581 1483.65391 87210.25 0.016647 8.2495E-06 0.28644 0.00014195 0.30308 0.0001502 495.558675003573 498.894551429452 22.229 0.23836 22.229 22.107 22.346 0 50 11 7 0 0 0 0.011476 1 8292 25.322 17.951 1 1.0662 1.0742 0 10652000 4511100 6140700 28068 684 10613 10904 43901 43901 PSEADPEADPEEATAAR 17 0 1 Unmodified _PSEADPEADPEEATAAR_ 0 0 0 Q9NY61;A0A087WW41 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 878.3887 2 878.387027 1754.7595 65416.48 0.68756 0.00060394 0.24666 0.00021667 0.93423 0.00082061 878.387212565723 883.391409677873 36.939 0.49129 36.939 36.699 37.19 -3.8147E-06 257 45 8 0 0 0 6.9834E-18 3 18649 127.71 123.95 1 0.93395 1.0143 0 50291000 24934000 25357000 28069 2080 10614 10905 43902;43903;43904 43904 PSEADPEADPEEATAAR 17 0 1 Unmodified _PSEADPEADPEEATAAR_ 0 0 0 Q9NY61;A0A087WW41 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.3852 2 878.387027 1754.7595 65287.97 0.61761 0.0005425 0.13933 0.00012239 0.75694 0.00066488 878.387098157398 883.892849959833 36.092 0.49292 36.092 35.84 36.333 0 248 40 8 0 0 0 1.611E-09 2 18398 109.84 106.2 1 0.96367 1.1064 0 52321000 24557000 27764000 28070 2080 10614 10905 43905;43906 43906 PSEADPEADPEEATAAR 17 0 1 Unmodified _PSEADPEADPEEATAAR_ 0 0 0 Q9NY61;A0A087WW41 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 883.392 2 878.387027 1754.7595 64683 0.47498 0.00041722 0.091518 8.0388E-05 0.5665 0.00049761 878.88850840071 883.391279353147 42.983 0.65505 42.983 42.704 43.359 0 267 42 9 0 0 0 0.012656 2 20046 30.059 30.059 1 1.515 1.2367 0 14503000 6195000 8308000 28071 2080 10614 10905 43907;43908 43907 PSEADPEADPEEATAAR 17 0 1 Unmodified _PSEADPEADPEEATAAR_ 0 0 0 Q9NY61;A0A087WW41 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 883.3904 2 878.387027 1754.7595 64544.71 0.038604 3.3909E-05 0.4087 0.000359 0.44731 0.00039291 878.387322180801 883.391592976723 43.311 0.59337 43.311 43.022 43.615 0 264 35 10 0 0 0 0.03863 1 19707 23.092 23.092 1 1.5167 1.2492 0 14190000 5423900 8766100 28072 2080 10614 10905 43909 43909 PSGEAFVELESEDEVK 16 1 0 Unmodified _PSGEAFVELESEDEVK_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EN40;D6RDL0 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 882.9161 2 882.912347 1763.81014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.264 1 86.264 85.764 86.764 0 0 0 0 0.015436 1 51924 43.991 34.987 1 28073 1231 10615 10906 43910 43910 PSGEAFVELESEDEVK 16 1 0 Unmodified _PSGEAFVELESEDEVK_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EN40;D6RDL0 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.9197 2 882.912347 1763.81014 64954.74 0.7035 0.00062113 0.068339 6.0338E-05 0.77184 0.00068147 882.912955716675 886.919457998285 85.624 0.6963 85.624 85.292 85.988 0 164 52 5 0 0 0 0.00015381 1 52551 96.745 96.745 1 1.9731 2.0192 0 25645000 7996600 17649000 28074 1231 10615 10906 43911 43911 PSGVSAALALK 11 1 0 Unmodified _PSGVSAALALK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.3106 2 507.303124 1012.5917 85458.38 0.57885 0.00029365 0.20169 0.00010232 0.78053 0.00039597 507.30315970501 511.31018276577 67.933 0.94087 67.933 67.535 68.476 0 361 82 6 0 0 0 5.028E-14 2 39331 150.35 101.56 1 1.1045 1.1939 0 42693000 20109000 22583000 28075 2133 10616 10907 43912;43913 43913 PSGVSAALALK 11 1 0 Unmodified _PSGVSAALALK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.3102 2 507.303124 1012.5917 NaN NaN NaN 0.1819 9.2276E-05 NaN NaN NaN NaN 66.627 0.89994 66.627 66.285 67.185 0 0 0 0 3.121E-05 1 39352 101.65 74.392 1 NaN NaN 0 28912000 0 28912000 28076 2133 10616 10907 43914 43914 PSGVSAALALK 11 1 0 Unmodified _PSGVSAALALK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.3032 2 507.303124 1012.5917 85780.01 0.32016 0.00016242 0.099017 5.0232E-05 0.41917 0.00021265 507.303143775461 511.310212497072 78.051 0.9269 78.051 77.691 78.618 0 251 61 6 0 0 0 0.0012067 2 41851 69.275 53.761 1 1.2111 0.97279 0 7790100 3167500 4622500 28077 2133 10616 10907 43915;43916 43916 PSGVSAALALK 11 1 0 Unmodified _PSGVSAALALK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.3032 2 507.303124 1012.5917 85169.95 0.43252 0.00021942 0.039464 2.002E-05 0.47198 0.00023944 507.303069409338 511.310205855732 78.246 1.0648 78.246 77.865 78.93 -7.6294E-06 263 70 7 0 0 0 0.030186 1 41050 38.804 34.113 1 1.2252 0.99698 0 7011000 2749000 4262000 28078 2133 10616 10907 43917 43917 PSHLVDAHTAEVNCLSFNPYSEFILATGSADK 32 1 0 Unmodified _PSHLVDAHTAEVNCLSFNPYSEFILATGSADK_ 0 0 0 Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP01;Q5JP02 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 875.6748 4 873.420047 3489.65108 64214.24 0.91436 0.00079862 -0.54965 -0.00048008 0.36471 0.00031855 874.171768771167 875.674276648047 128.07 0.79385 128.07 127.76 128.55 0 161 32 10 0 0 0 2.2892E-12 1 77232 59.598 59.598 1 1.9538 1.5816 0 23346000 8217000 15129000 28079 1771 10617 10908 43918 43918 PSHLVDAHTAEVNCLSFNPYSEFILATGSADK 32 1 0 Unmodified _PSHLVDAHTAEVNCLSFNPYSEFILATGSADK_ 0 0 0 Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP01;Q5JP02 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 875.6749 4 873.420047 3489.65108 64300.11 0.4629 0.0004043 -0.023195 -2.0259E-05 0.4397 0.00038404 873.671161731536 875.674674812856 127.81 0.53376 127.81 127.58 128.11 0 152 21 13 0 0 0 4.9323E-07 1 76243 40.328 40.328 1 1.6307 1.3167 0 23477000 7996800 15480000 28080 1771 10617 10908 43919 43919 PSLLADSK 8 1 0 Unmodified _PSLLADSK_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.7341 2 415.734543 829.454533 98734.25 -0.030184 -1.2549E-05 0.2994 0.00012447 0.26921 0.00011192 415.734235236031 419.741962635663 32.966 0.51777 32.966 32.721 33.239 0 128 47 4 0 0 0 0.027474 1 16408 53.878 23.316 1 0.96028 0.97102 0 13120000 5811300 7308400 28081 1854 10618 10909 43920 43920 PSLLLRPR 8 0 2 Unmodified _PSLLLRPR_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 317.8747 3 317.874788 950.602535 106601.8 0.32072 0.00010195 0.24713 7.8558E-05 0.56786 0.00018051 317.874840753511 324.546954776923 45.303 0.71233 45.303 45.038 45.75 3.8147E-06 106 62 4 0 0 0 0.0065722 1 24418 63.48 16.398 1 0.98975 1.0733 0 26523000 12498000 14025000 28082 2038 10619 10910 43921 43921 PSLLLRPR 8 0 2 Unmodified _PSLLLRPR_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 317.8748 3 317.874788 950.602535 104650.9 0.52634 0.00016731 -0.32905 -0.0001046 0.19729 6.2713E-05 317.87458748864 324.546811172329 43.701 0.755 43.701 43.128 43.883 -3.8147E-06 238 60 6 0 0 0 0.011417 2 23579 55.676 36.582 1 0.97962 1.1462 0 112940000 58393000 54543000 28083 2038 10619 10910 43922;43923 43922 PSLSGVAPLPR 11 0 1 Unmodified _PSLSGVAPLPR_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.3221 2 547.321848 1092.62914 85081.39 0.68246 0.00037352 0.386 0.00021126 1.0685 0.00058479 547.321742061455 552.326541609459 75.584 0.51601 75.584 75.346 75.862 -7.6294E-06 163 44 5 0 0 0 0.00032567 2 44419 96.331 81.18 1 0.6711 0.68563 0 14635000 8405700 6229600 28084 680 10620 10911 43924;43925 43925 PSLSGVAPLPR 11 0 1 Unmodified _PSLSGVAPLPR_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3218 2 547.321848 1092.62914 85224.53 0.64707 0.00035415 0.42633 0.00023334 1.0734 0.00058749 547.321747093651 552.326553788522 74.441 0.57239 74.441 74.139 74.712 0 153 49 5 0 0 0 0.0015987 1 44682 66.273 40.168 1 0.64927 0.65117 0 17695000 11433000 6261800 28085 680 10620 10911 43926 43926 PSLSGVAPLPR 11 0 1 Unmodified _PSLSGVAPLPR_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.3224 2 547.321848 1092.62914 85748.17 0.54233 0.00029683 0.64687 0.00035405 1.1892 0.00065088 547.321889695372 552.326312205146 86.056 0.59082 86.056 85.838 86.429 7.6294E-06 108 31 5 0 0 0 0.0058056 1 46338 55.549 46.335 1 1.375 1.2418 0 2103000 740300 1362700 28086 680 10620 10911 43927 43927 PSLSLGTITDEEMK 14 1 0 Oxidation (M) _PSLSLGTITDEEM(ox)K_ PSLSLGTITDEEM(1)K PSLSLGTITDEEM(61.42)K 0 1 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.8848 2 768.876721 1535.73889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.793 1 96.793 96.293 97.293 -7.6294E-06 0 0 0 0.0011977 1 54375 61.419 42.156 1 28087 186;1747 10621 10912 43928 43928 151 PSLSLGTITDEEMK 14 1 0 Oxidation (M) _PSLSLGTITDEEM(ox)K_ PSLSLGTITDEEM(1)K PSLSLGTITDEEM(48.19)K 0 1 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.8837 2 768.876721 1535.73889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.721 1 96.721 96.221 97.221 0 0 0 0 0.0064778 1 53519 48.188 32.922 1 28088 186;1747 10621 10912 43929 43929 151 PSNELTNSTVVIDTHK 16 1 0 Unmodified _PSNELTNSTVVIDTHK_ 0 0 0 B2RMQ4;Q8WWK9;C9J7Y4;C9J649 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.6363 3 585.635491 1753.88464 79672.52 0.088797 5.2003E-05 -0.086795 -5.083E-05 0.0020018 1.1724E-06 585.635217864809 588.306860394852 53.138 0.76205 53.138 52.715 53.477 -3.8147E-06 151 42 5 0 0 0 0.017667 2 30490 22.405 22.405 1 0.9562 0.99178 0 18798000 8362500 10436000 28089 895 10622 10913 43930;43931 43931 PSNIFLVDTK 10 1 0 Unmodified _PSNIFLVDTK_ 0 0 0 Q8IW76;B7ZKK7;P19525 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.3209 2 567.313689 1132.61282 80749.62 0.82064 0.00046556 -0.19163 -0.00010871 0.62901 0.00035685 567.313483425375 571.320602383966 82.177 0.75641 82.177 81.697 82.454 0 261 65 6 0 0 0 5.3799E-06 2 48940 108.7 98.432 1 1.2892 1.3415 0 16886000 8881300 8004200 28090 1111 10623 10914 43932;43933 43933 PSNILDYFR 9 0 1 Unmodified _PSNILDYFR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.7905 2 562.790381 1123.56621 NaN NaN NaN -0.3169 -0.00017835 NaN NaN NaN NaN 107.04 0.15405 107.04 106.97 107.12 -7.6294E-06 0 0 0 0.03828 1 68293 50.805 32.985 1 NaN NaN 0 2099900 2099900 0 28091 1984 10624 10915 43934 43934 PSNILDYFR 9 0 1 Unmodified _PSNILDYFR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.7946 2 562.790381 1123.56621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107 1 107 106.5 107.5 0 0 0 0 0.029773 1 68229 53.089 33.995 1 28092 1984 10624 10915 43935 43935 PSNILDYFR 9 0 1 Unmodified _PSNILDYFR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.7955 2 562.790381 1123.56621 81781.36 0.84427 0.00047515 -0.063126 -3.5527E-05 0.78114 0.00043962 562.790035478823 567.794374562887 119.04 0.45432 119.04 118.83 119.29 0 55 20 4 0 0 0 0.0062323 1 70333 64.711 57.144 1 4.0569 3.5622 0 1824000 354220 1469800 28093 1984 10624 10915 43936 43936 PSNILDYFR 9 0 1 Unmodified _PSNILDYFR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.7946 2 562.790381 1123.56621 89886.13 0.81361 0.00045789 -0.41979 -0.00023625 0.39382 0.00022164 562.790127145853 567.794381541788 118.87 0.41458 118.87 118.65 119.06 -7.6294E-06 64 18 5 0 0 0 0.0062552 1 69294 64.654 59.665 1 4.7144 4.2683 0 2190300 341460 1848800 28094 1984 10624 10915 43937 43937 PSNILVNSR 9 0 1 Unmodified _PSNILVNSR_ 0 0 0 B4DFY5;A4QPA9;Q02750;H3BRW9;B3KS97;P36507;Q7Z370;G5E9C7;A0A1B0GUL7 B4DFY5;P36507 P36507 MAP2K1;MAP2K2;DKFZp686L02273 Dual specificity mitogen-activated protein kinase kinase 1;Dual specificity mitogen-activated protein kinase kinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.2873 2 500.282723 998.550893 84248.79 0.3878 0.00019401 -0.43778 -0.00021901 -0.049976 -2.5002E-05 500.282485686922 505.286865547118 36.479 0.57825 36.479 36.303 36.881 0 114 53 4 0 0 0 0.0019868 1 18397 78.264 60.444 1 2.2228 2.329 0 12455000 4834700 7619900 28095 1547;674 10625 10916 43938 43938 PSNILYVDESGNPESIR 17 0 1 Unmodified _PSNILYVDESGNPESIR_ 0 0 0 B4DKZ2;B4DG22;B7ZB17;P51812 B4DKZ2 B4DKZ2 RPS6KA3 Ribosomal protein S6 kinase alpha-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 950.9691 2 945.465612 1888.91667 65405.5 0.8669 0.00081962 -0.90734 -0.00085786 -0.040439 -3.8234E-05 945.966944360771 950.970000364115 85.094 0.28676 85.094 84.961 85.248 0 47 22 4 0 0 0 1.2639E-06 3 51066 88.552 81.893 1 1.089 1.0988 0 9528200 4551300 4976900 28096 971 10626 10917 43939;43940;43941 43940 PSNILYVDESGNPESIR 17 0 1 Unmodified _PSNILYVDESGNPESIR_ 0 0 0 B4DKZ2;B4DG22;B7ZB17;P51812 B4DKZ2 B4DKZ2 RPS6KA3 Ribosomal protein S6 kinase alpha-3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.466 2 945.465612 1888.91667 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.121 1 84.121 83.621 84.621 0 0 0 0 0.00050766 1 51615 62.042 48.363 1 28097 971 10626 10917 43942 43942 PSNILYVDESGNPESIR 17 0 1 Unmodified _PSNILYVDESGNPESIR_ 0 0 0 B4DKZ2;B4DG22;B7ZB17;P51812 B4DKZ2 B4DKZ2 RPS6KA3 Ribosomal protein S6 kinase alpha-3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 950.4681 2 945.465612 1888.91667 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.178 1 84.178 83.678 84.678 -7.6294E-06 0 0 0 0.00042416 1 51660 67.275 54.644 1 28098 971 10626 10917 43943 43943 PSNPSSHEVVAWIR 14 0 1 Unmodified _PSNPSSHEVVAWIR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2764 3 526.938956 1577.79504 83775.92 0.51847 0.0002732 -0.041901 -2.2079E-05 0.47657 0.00025112 526.938899720025 530.275363544114 68.111 0.9303 68.111 67.691 68.621 0 400 81 8 0 0 0 0.001238 2 39311 47.639 47.639 1 0.66462 0.69244 0 38360000 23932000 14428000 28099 1398 10627 10918 43944;43945 43944 PSNPSSHEVVAWIR 14 0 1 Unmodified _PSNPSSHEVVAWIR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.9393 3 526.938956 1577.79504 83145.04 0.20111 0.00010597 0.31701 0.00016705 0.51812 0.00027302 526.939047222663 530.275396613128 77.707 0.66378 77.707 77.465 78.129 0 212 44 7 0 0 0 0.014372 2 41601 30.844 30.844 1 0.67275 0.57154 0 9164200 5397100 3767200 28100 1398 10627 10918 43946;43947 43947 PSNPSSHEVVAWIR 14 0 1 Unmodified _PSNPSSHEVVAWIR_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.6098 3 526.938956 1577.79504 84019.73 0.41366 0.00021797 0.65657 0.00034597 1.0702 0.00056394 526.939138145687 530.275793680386 77.809 0.64281 77.809 77.556 78.199 0 206 41 8 0 0 0 0.016242 2 40804 27.58 27.58 1 0.70422 0.58736 0 6483400 3419000 3064500 28101 1398 10627 10918 43948;43949 43948 PSNVLINALGQVK 13 1 0 Unmodified _PSNVLINALGQVK_ 0 0 0 B5BU16;A8K3Y2;P52564;A0A024R8K3 B5BU16 B5BU16 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.9045 2 676.898451 1351.78235 NaN NaN NaN 0.20898 0.00014146 NaN NaN NaN NaN 101.26 0.26863 101.26 101.09 101.36 0 0 0 0 0.0013564 1 62112 76.143 66.156 1 NaN NaN 0 3738800 0 3738800 28102 728 10628 10919 43950 43950 PSNVLINALGQVK 13 1 0 Unmodified _PSNVLINALGQVK_ 0 0 0 B5BU16;A8K3Y2;P52564;A0A024R8K3 B5BU16 B5BU16 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.906 2 676.898451 1351.78235 NaN NaN NaN 0.35195 0.00023823 NaN NaN NaN NaN 100.4 0.35745 100.4 100.2 100.55 7.6294E-06 0 0 0 0.00037217 1 62998 85.958 80.738 1 NaN NaN 0 3236500 0 3236500 28103 728 10628 10919 43951 43951 PSPLTLAPHDFANIK 15 1 0 Unmodified _PSPLTLAPHDFANIK_ 0 0 0 P53618 P53618 P53618 COPB1 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.6367 3 540.96299 1619.86714 81252.59 0.89715 0.00048533 0.85807 0.00046418 1.7552 0.00094951 540.963618589838 543.635079657381 91.904 0.42458 91.904 91.666 92.091 0 117 37 4 0 0 0 0.0093308 1 56864 27.263 27.263 1 1.2596 1.3245 0 19703000 7238100 12465000 28104 1606 10629 10920 43952 43952 PSPPYFGLLLASVGR 15 0 1 Unmodified _PSPPYFGLLLASVGR_ 0 0 0 P17812;B4E1E0 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.4467 2 787.440483 1572.86641 68861.32 1.2015 0.00094609 0.25007 0.00019692 1.4515 0.001143 787.441342919568 792.444029661727 131.06 0.869 131.06 130.63 131.5 0 184 57 5 0 0 0 0.00071374 3 85299 60.161 60.161 1 1.7168 1.8031 0 11762000 4486000 7276000 28105 1494 10630 10921 43953;43954;43955 43953 PSQAPAVEVAPAGASYNPSFEDHQTLLSAAHEVELQR 37 0 1 Unmodified _PSQAPAVEVAPAGASYNPSFEDHQTLLSAAHEVELQR_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4E013;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 980.485 4 979.982966 3915.90276 60685.86 0.29623 0.0002903 0.013406 1.3138E-05 0.30963 0.00030344 980.484106079851 982.986326803731 114.76 0.40728 114.76 114.52 114.93 -7.6294E-06 142 17 13 0 0 0 4.6275E-05 2 66175 36.338 36.338 1 1.0008 0.87298 0 27061000 15007000 12054000 28106 1068 10631 10922 43956;43957 43957 PSQCSEFIQQSSMK 14 1 0 Oxidation (M) _PSQCSEFIQQSSM(ox)K_ PSQCSEFIQQSSM(1)K PSQCSEFIQQSSM(63.97)K 0 1 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.8749 2 836.868905 1671.72326 NaN NaN NaN -1.0811 -0.00090474 NaN NaN NaN NaN 34.939 0.14036 34.939 34.859 34.999 0 0 0 0 0.00091086 1 17748 63.966 56.237 1 NaN NaN 0 4069500 0 4069500 28107 1945 10632 10923 43958 43958 1789 PSQCSEFIQQSSMK 14 1 0 Oxidation (M) _PSQCSEFIQQSSM(ox)K_ PSQCSEFIQQSSM(1)K PSQCSEFIQQSSM(57.8)K 0 1 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.8692 2 836.868905 1671.72326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.993 1 34.993 34.493 35.493 0 0 0 0 0.0013661 1 17790 57.802 53.503 1 28108 1945 10632 10923 43959 43959 1789 PSQVNGAPGSPTEPAGQK 18 1 0 Unmodified _PSQVNGAPGSPTEPAGQK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.4334 2 861.42629 1720.83803 68103.79 0.72196 0.00062191 0.71934 0.00061966 1.4413 0.0012416 861.428352930525 865.433777753786 25.384 0.23929 25.384 25.274 25.513 0 40 12 6 0 0 0 1.2103E-07 2 11009 87.498 78.769 1 1.0518 1.0674 0 6083100 2521700 3561400 28109 1997 10633 10924 43960;43961 43960 PSQVNGAPGSPTEPAGQK 18 1 0 Unmodified _PSQVNGAPGSPTEPAGQK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.4323 2 861.42629 1720.83803 67056.12 0.59025 0.00050846 0.45003 0.00038767 1.0403 0.00089613 861.928106834889 865.432003664481 25.214 0.22204 25.214 25.106 25.328 0 30 7 6 0 0 0 1.8351E-22 2 10862 132.97 124.24 1 1.1995 1.2176 0 9112500 4290400 4822000 28110 1997 10633 10924 43962;43963 43962 PSSFQNNVQSQDPQVSTK 18 1 0 Unmodified _PSSFQNNVQSQDPQVSTK_ 0 0 0 D3DS96;Q9NRL2;Q59G54 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 999.9833 2 995.976875 1989.9392 NaN NaN NaN 0.1578 0.00015717 NaN NaN NaN NaN 41.239 0.28105 41.239 41.073 41.354 0 0 0 0 4.0952E-23 1 21652 119.87 97.811 1 NaN NaN 0 5545400 0 5545400 28111 1187 10634 10925 43964 43964 PSSFQNNVQSQDPQVSTK 18 1 0 Unmodified _PSSFQNNVQSQDPQVSTK_ 0 0 0 D3DS96;Q9NRL2;Q59G54 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1000.4874 2 995.976875 1989.9392 NaN NaN NaN -0.082455 -8.2123E-05 NaN NaN NaN NaN 40.389 0.29393 40.389 40.251 40.545 0 0 0 0 2.4998E-10 2 21499 92.457 71.6 1 NaN NaN 0 7356700 0 7356700 28112 1187 10634 10925 43965;43966 43965 PSSSPVIFAGGQDR 14 0 1 Unmodified _PSSSPVIFAGGQDR_ 0 0 0 Q15366;B4DLC0;H3BSS4 Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3616 2 709.357148 1416.69974 72017.75 0.69649 0.00049406 0.026052 1.848E-05 0.72254 0.00051254 709.35693294802 714.361286406574 60.864 0.53413 60.864 60.588 61.122 0 218 40 8 0 0 0 1.387E-37 2 34644 167.2 147.59 1 2.6019 2.8928 0 74845000 23610000 51235000 28113 1760 10635 10926 43967;43968 43967 PSSSPVIFAGGQDR 14 0 1 Unmodified _PSSSPVIFAGGQDR_ 0 0 0 Q15366;B4DLC0;H3BSS4 Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.3618 2 709.357148 1416.69974 71985.41 0.76343 0.00054154 0.26344 0.00018687 1.0269 0.00072842 709.357684879609 714.361242458638 59.635 0.75659 59.635 59.378 60.134 0 324 64 8 0 0 0 1.8006E-29 2 34625 152.14 135.23 1 2.3044 2.6243 0 107500000 29404000 78100000 28114 1760 10635 10926 43969;43970 43969 PSSSPVIFAGGQDR 14 0 1 Unmodified _PSSSPVIFAGGQDR_ 0 0 0 Q15366;B4DLC0;H3BSS4 Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.362 2 709.357148 1416.69974 72319.99 0.44087 0.00031273 -0.077991 -5.5324E-05 0.36288 0.00025741 709.356677248388 714.361212620969 70.102 0.46556 70.102 69.885 70.351 0 199 37 7 0 0 0 2.6923E-05 2 36719 96.604 84.441 1 1.951 1.6143 0 11288000 3458900 7828700 28115 1760 10635 10926 43971;43972 43971 PSSSPVIFAGGQDR 14 0 1 Unmodified _PSSSPVIFAGGQDR_ 0 0 0 Q15366;B4DLC0;H3BSS4 Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.3617 2 709.357148 1416.69974 73539.8 0.31024 0.00022007 0.14933 0.00010593 0.45956 0.00032599 709.356837325681 714.361384227255 70.556 0.57152 70.556 70.326 70.898 0 208 48 6 0 0 0 9.9732E-05 2 36215 85.288 76.1 1 2.0352 1.6422 0 10943000 3575100 7368000 28116 1760 10635 10926 43973;43974 43973 PSSSPVIFAGGQLTK 15 1 0 Unmodified _PSSSPVIFAGGQLTK_ 0 0 0 H3BRU6;F8VZX2;B4DRD7 H3BRU6 H3BRU6 PCBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.9147 2 744.906473 1487.79839 72548.53 0.97738 0.00072805 0.25989 0.0001936 1.2373 0.00092165 744.907092110325 748.913617834166 97.188 0.48622 97.188 96.97 97.456 0 82 23 5 0 0 0 0.02923 1 54710 27.681 27.681 1 1.5322 1.2962 0 1450700 650890 799820 28117 1263 10636 10927 43975 43975 PSVVSLQNLIVR 12 0 1 Unmodified _PSVVSLQNLIVR_ 0 0 0 D3DVA5;V9GYM8;Q92974 D3DVA5 D3DVA5 ARHGEF2 Rho guanine nucleotide exchange factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.9016 2 662.900994 1323.78744 76437.35 0.63406 0.00042032 0.96093 0.000637 1.595 0.0010573 662.902182403951 667.905010785023 110.97 0.31023 110.97 110.86 111.17 -7.6294E-06 56 22 4 0 0 0 0.00020601 1 71529 79.974 75.278 1 0.94145 0.9385 0 7093400 3532100 3561300 28118 1197 10637 10928 43976 43976 PSVYLGLFDINR 12 0 1 Unmodified _PSVYLGLFDINR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.3777 2 697.377352 1392.74015 73263.12 0.63239 0.00044101 -0.55508 -0.0003871 0.077306 5.3912E-05 697.377112177984 702.381598474432 118.48 0.53606 118.48 118.24 118.78 0 174 32 8 0 0 0 4.6886E-08 2 77867 114.83 114.83 1 1.2332 1.2354 0 18522000 7248200 11273000 28119 1945 10638 10929 43977;43978 43977 PSVYLGLFDINR 12 0 1 Unmodified _PSVYLGLFDINR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.3771 2 697.377352 1392.74015 72653.17 0.60698 0.00042329 0.33511 0.0002337 0.94209 0.000657 697.377466618338 702.381762765436 130.98 0.66437 130.98 130.7 131.37 0 145 28 8 0 0 0 1.3787E-05 2 79378 106.29 106.29 1 2.4079 1.9627 0 15189000 4432500 10757000 28120 1945 10638 10929 43979;43980 43980 PSVYLGLFDINR 12 0 1 Unmodified _PSVYLGLFDINR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 697.3781 2 697.377352 1392.74015 73561.65 0.9032 0.00062987 0.046961 3.275E-05 0.95016 0.00066262 697.377069069821 702.381722980511 130.76 0.74185 130.76 130.44 131.18 0 151 31 8 0 0 0 9.4492E-05 2 78315 96.113 96.113 1 2.3843 2.0799 0 26720000 7814500 18905000 28121 1945 10638 10929 43981;43982 43982 PTHFTVNAK 9 1 0 Unmodified _PTHFTVNAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 338.8507 3 338.85042 1013.52943 105014.8 -0.22659 -7.6779E-05 0.33275 0.00011275 0.10616 3.5972E-05 338.850728307469 341.521779920125 22.641 0.4414 22.641 22.446 22.887 0 80 26 5 0 0 0 0.038896 1 8679 20.972 16.859 1 1.4708 1.4527 0 9342900 3594700 5748200 28122 1504 10639 10930 43983 43983 PTLSEIELFR 10 0 1 Unmodified _PTLSEIELFR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.832 2 602.832246 1203.64994 78522.21 0.73229 0.00044145 0.66533 0.00040108 1.3976 0.00084253 603.33440063561 607.836322306221 107.87 0.90332 107.87 107.4 108.31 0 304 67 8 0 0 0 1.3415E-08 2 67128 123.21 123.21 1 1.0693 1.1401 0 43912000 20738000 23174000 28123 1411 10640 10931 43984;43985 43984 PTLSEIELFR 10 0 1 Unmodified _PTLSEIELFR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.8322 2 602.832246 1203.64994 78984.23 0.7701 0.00046424 0.65388 0.00039418 1.424 0.00085842 602.831873559261 608.338553051779 107.21 0.83575 107.21 106.73 107.56 0 264 57 8 0 0 0 1.7777E-08 2 68256 122.33 122.33 1 1.009 1.1053 0 39884000 21711000 18173000 28124 1411 10640 10931 43986;43987 43986 PTLSEIELFR 10 0 1 Unmodified _PTLSEIELFR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.3384 2 602.832246 1203.64994 77085.63 0.85092 0.00051296 0.99073 0.00059724 1.8417 0.0011102 602.832844516948 608.337608342971 119.27 0.75357 119.27 119.07 119.82 0 94 33 6 0 0 0 0.010142 2 70588 53.756 52.278 1 1.0594 0.9025 0 5496800 2459200 3037600 28125 1411 10640 10931 43988;43989 43988 PTLSEIELFR 10 0 1 Unmodified _PTLSEIELFR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.837 2 602.832246 1203.64994 78317.65 0.74097 0.00044668 0.63463 0.00038257 1.3756 0.00082925 602.832707706494 607.836317800004 119.06 0.54871 119.06 118.79 119.34 0 70 21 6 0 0 0 1.2713E-05 2 69515 103.19 82.749 1 0.96886 0.80381 0 5163600 2517100 2646500 28126 1411 10640 10931 43990;43991 43990 PTPALSEASSSSIR 14 0 1 Unmodified _PTPALSEASSSSIR_ 0 0 0 C9J406 C9J406 C9J406 IMMT MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3505 2 701.862263 1401.70997 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.54 1 49.54 49.04 50.04 0 0 0 0 0.0028371 1 27243 59.198 38.421 1 28127 1128 10641 10932 43992 43992 PTPALSEEASSSSIR 15 0 1 Unmodified _PTPALSEEASSSSIR_ 0 0 0 B4DS66;Q16891;B4DKR1;Q05DN3 B4DS66;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.3839 2 766.383559 1530.75257 71025.65 0.87745 0.00067246 0.085659 6.5648E-05 0.9631 0.00073811 766.383486654018 771.387741208123 49.957 0.24107 49.957 49.863 50.104 0 54 18 4 0 0 0 0.0001936 2 28148 96.745 96.745 1 0.72975 0.72221 0 12360000 6661600 5698000 28128 1774;1029 10642 10933 43993;43994 43993 PTPGLTPR 8 0 1 Unmodified _PTPGLTPR_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 424.7472 2 419.742702 837.470852 91459.88 0.042492 1.7836E-05 0.1171 4.9152E-05 0.15959 6.6988E-05 419.742719457976 424.746749375395 28.383 0.4987 28.383 28.17 28.669 1.9073E-06 126 32 6 0 0 0 0.015121 1 13278 61.962 15.537 1 0.98446 1.1315 0 142220000 69341000 72876000 28129 1789 10643 10934 43995 43995 PTPGLTPR 8 0 1 Unmodified _PTPGLTPR_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 424.7469 2 419.742702 837.470852 94662.2 -0.037705 -1.5826E-05 0.2582 0.00010838 0.22049 9.2551E-05 419.743032742716 424.746790778359 27.803 0.53633 27.803 27.558 28.095 -1.9073E-06 127 30 6 0 0 0 0.0395 1 12971 47.574 11.956 1 0.91154 1.0382 0 131850000 69419000 62429000 28130 1789 10643 10934 43996 43996 PTPLILDEQGR 11 0 1 Unmodified _PTPLILDEQGR_ 0 0 0 B4DLS8;Q53GV6;B2R791;O43395;B4DM28 B4DLS8 B4DLS8 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.845 2 619.840602 1237.66665 78264.67 0.55116 0.00034163 1.0616 0.000658 1.6127 0.00099964 619.842016618217 624.844760344097 71.148 0.39774 71.148 70.912 71.31 0 63 31 4 0 0 0 0.022466 1 41493 42.743 32.22 1 0.89521 0.9357 0 10688000 4756600 5931100 28131 848 10644 10935 43997 43997 PTPLILDEQGR 11 0 1 Unmodified _PTPLILDEQGR_ 0 0 0 B4DLS8;Q53GV6;B2R791;O43395;B4DM28 B4DLS8 B4DLS8 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.8448 2 619.840602 1237.66665 NaN NaN NaN -0.20829 -0.00012911 NaN NaN NaN NaN 69.862 0.35501 69.862 69.694 70.049 0 0 0 0 0.029624 1 41633 50.292 34.63 1 NaN NaN 0 4387900 0 4387900 28132 848 10644 10935 43998 43998 PTSFQPQPFK 10 1 0 Unmodified _PTSFQPQPFK_ 0 0 0 Q9H6R4;B4DF80;B3KPN5;A0A0C4DFX0 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.8069 2 588.806031 1175.59751 77743.63 1.1127 0.00065517 -0.13395 -7.8872E-05 0.97876 0.0005763 588.806106444161 592.813342840395 59.443 0.3226 59.443 59.206 59.529 0 65 24 5 0 0 0 2.874E-30 2 33882 179.28 118.6 1 0.99157 1.1154 0 71751000 32090000 39661000 28133 2038 10645 10936 43999;44000 43999 PTSFQPQPFK 10 1 0 Unmodified _PTSFQPQPFK_ 0 0 0 Q9H6R4;B4DF80;B3KPN5;A0A0C4DFX0 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.8069 2 588.806031 1175.59751 76276.13 0.78415 0.00046171 0.20426 0.00012027 0.98841 0.00058198 588.806203005335 592.813828832719 58.267 0.22214 58.267 58.129 58.351 3.8147E-06 46 14 6 0 0 0 0.0029037 1 33888 66.962 46.965 1 0.80282 0.90078 0 77250000 39881000 37368000 28134 2038 10645 10936 44001 44001 PTSFQPQPFK 10 1 0 Unmodified _PTSFQPQPFK_ 0 0 0 Q9H6R4;B4DF80;B3KPN5;A0A0C4DFX0 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.8138 2 588.806031 1175.59751 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.226 1 69.226 68.726 69.726 0 0 0 0 0.0045507 1 35472 64.711 33.638 1 28135 2038 10645 10936 44002 44002 PTVTVNFR 8 0 1 Unmodified _PTVTVNFR_ 0 0 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;C9J6B6;C9K073 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.2649 2 467.261259 932.507966 91921.59 0.36329 0.00016975 -0.16959 -7.9243E-05 0.1937 9.0511E-05 467.261188826797 472.265333214055 57.545 0.51817 57.545 57.261 57.779 0 121 39 4 0 0 0 0.02313 1 32460 56.721 41.223 1 1.9833 2.0517 0 23353000 6949300 16404000 28136 896 10646 10937 44003 44003 PTVTVNFR 8 0 1 Unmodified _PTVTVNFR_ 0 0 0 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;C9J6B6;C9K073 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.265 2 467.261259 932.507966 91217.79 0.14102 6.5891E-05 -0.25284 -0.00011814 -0.11182 -5.2249E-05 467.261269845382 472.265299694644 56.469 0.50692 56.469 56.231 56.738 0 98 36 5 0 0 0 0.0088675 1 32443 76.774 58.639 1 2.1752 2.3428 0 25861000 8912200 16949000 28137 896 10646 10937 44004 44004 PVAIQTYPILGEK 13 1 0 Unmodified _PVAIQTYPILGEK_ 0 0 0 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.9164 2 714.908485 1427.80242 72698.35 0.91643 0.00065517 0.72578 0.00051886 1.6422 0.001174 714.909735671541 718.915624927903 95.846 0.7493 95.846 95.403 96.152 0 303 63 6 0 0 0 8.5744E-09 3 58135 116.55 109.42 1 0.94225 1.0251 0 48371000 25716000 22655000 28138 1936 10647 10938 44005;44006;44007 44005 PVAIQTYPILGEK 13 1 0 Unmodified _PVAIQTYPILGEK_ 0 0 0 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.41 2 714.908485 1427.80242 73091.12 0.70348 0.00050292 0.48346 0.00034563 1.1869 0.00084855 714.909122283805 718.915558683448 94.91 0.69207 94.91 94.602 95.294 0 321 59 8 0 0 0 9.3225E-09 3 58953 115.78 115.78 1 0.91785 1.0341 0 68637000 37775000 30862000 28139 1936 10647 10938 44008;44009;44010 44009 PVAIQTYPILGEK 13 1 0 Unmodified _PVAIQTYPILGEK_ 0 0 0 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.9165 2 714.908485 1427.80242 74114.84 0.84128 0.00060144 0.74208 0.00053052 1.5834 0.001132 714.909775754331 718.915667316466 108.95 0.63137 108.95 108.69 109.33 0 154 31 7 0 0 0 0.00012326 2 62579 80.706 80.706 1 1.3421 1.078 0 7914600 3537400 4377100 28140 1936 10647 10938 44011;44012 44011 PVAIQTYPILGEK 13 1 0 Unmodified _PVAIQTYPILGEK_ 0 0 0 Q8TED0;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.916 2 714.908485 1427.80242 74391.32 0.70518 0.00050414 0.4348 0.00031084 1.14 0.00081498 714.909064170375 718.915628284881 108.8 0.61936 108.8 108.53 109.15 -7.6294E-06 162 31 8 0 0 0 0.00013828 2 61580 73.499 73.499 1 1.5427 1.2573 0 6616100 2508700 4107400 28141 1936 10647 10938 44013;44014 44013 PVASQLPR 8 0 1 Unmodified _PVASQLPR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.2552 2 434.255977 866.497401 91088.59 -0.053681 -2.3311E-05 0.28488 0.00012371 0.2312 0.0001004 434.255704916293 439.260329259425 30.066 0.33841 30.066 29.89 30.229 1.9073E-06 82 30 4 0 0 0 0.0083247 1 14621 79.116 55.593 1 1.1005 1.1258 0 32025000 12284000 19741000 28142 730 10648 10939 44015 44015 PVASQLPR 8 0 1 Unmodified _PVASQLPR_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.2556 2 434.255977 866.497401 91505.41 0.40246 0.00017477 0.2238 9.7187E-05 0.62626 0.00027196 434.255814073042 439.260338770634 29.608 0.5072 29.608 29.465 29.973 1.9073E-06 113 38 6 0 0 0 0.020252 1 14320 58.604 35.456 1 1.2469 1.3629 0 36234000 15642000 20592000 28143 730 10648 10939 44016 44016 PVAVSELFTTLPIVQGK 17 1 0 Unmodified _PVAVSELFTTLPIVQGK_ 0 0 0 Q5VU10;P78346;B4DJR3;Q5VU11 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.5221 2 900.019295 1798.02404 NaN NaN NaN -0.86074 -0.00077468 NaN NaN NaN NaN 129.17 0.13812 129.17 129.09 129.23 0 0 0 0 3.2277E-47 1 84222 159.99 145.3 1 NaN NaN 0 6876400 6876400 0 28144 1663 10649 10940 44017 44017 PVAVSELFTTLPIVQGK 17 1 0 Unmodified _PVAVSELFTTLPIVQGK_ 0 0 0 Q5VU10;P78346;B4DJR3;Q5VU11 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.0176 2 900.019295 1798.02404 NaN NaN NaN -0.2342 -0.00021078 NaN NaN NaN NaN 128.73 0.16602 128.73 128.66 128.82 0 0 0 0 2.364E-26 1 86019 134.08 108.34 1 NaN NaN 0 5474900 5474900 0 28145 1663 10649 10940 44018 44018 PVCPLCK 7 1 0 Unmodified _PVCPLCK_ 0 0 0 A0A024RCP3;Q12899;A2AE48;A0A0G2JIW2;A2AE50;Q5SPU2 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.2198 2 437.219691 872.42483 96059.28 -0.23391 -0.00010227 0.27845 0.00012175 0.044546 1.9477E-05 437.219761414138 441.226612692344 26.317 0.27673 26.317 26.157 26.433 0 38 15 4 0 0 0 0.032615 1 11746 65.263 56.34 1 0.49554 0.50334 0 9131400 6126200 3005200 28146 365 10650 10941 44019 44019 PVDNTYYK 8 1 0 Unmodified _PVDNTYYK_ 0 0 0 Q643R0;Q9ULW0 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.242 2 500.242732 998.470912 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.437 1 24.437 23.937 24.937 0 0 0 0 0.0056627 1 10165 82.75 53.374 1 28147 1837 10651 10942 44020 44020 PVEIEIETPEQAK 13 1 0 Unmodified _PVEIEIETPEQAK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0;D2CPK1;E7EUB5 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.8889 2 741.887946 1481.76134 72642.08 0.91071 0.00067565 0.15527 0.0001152 1.066 0.00079084 742.389754416549 745.894742087625 89.15 0.41158 89.15 88.895 89.306 -7.6294E-06 54 26 4 0 0 0 0.01138 1 49292 40.616 40.616 1 1.5373 1.2842 0 1323600 716560 607000 28148 118 10652 10943 44021 44021 PVFLPR 6 0 1 Unmodified _PVFLPR_ 0 0 0 Q96ST3;B3KQE3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 364.7263 2 364.726324 727.438095 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.179 1 59.179 58.679 59.679 3.8147E-06 0 0 0 0.050279 1 33675 74.417 31.852 1 28149 1990 10653 10944 44022 44022 PVGLLLSER 9 0 1 Unmodified _PVGLLLSER_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.302 2 492.297842 982.581131 87635.53 0.057416 2.8266E-05 0.31716 0.00015614 0.37458 0.0001844 492.298133261951 497.301905587465 77.883 0.69358 77.883 77.46 78.153 0 129 53 5 0 0 0 0.016119 1 45879 54.157 15.366 1 2.3581 2.3883 0 7653200 1990200 5663000 28150 2094 10654 10945 44023 44023 PVGLLLSER 9 0 1 Unmodified _PVGLLLSER_ 0 0 0 Q9P287;B4E318;B4DUS0 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.3018 2 492.297842 982.581131 NaN NaN NaN -0.013043 -6.4209E-06 NaN NaN NaN NaN 76.686 0.64401 76.686 76.206 76.85 7.6294E-06 0 0 0 0.0366 1 46056 51.346 22.197 1 NaN NaN 0 6849700 0 6849700 28151 2094 10654 10945 44024 44024 PVGSLAGIGEVLGK 14 1 0 Unmodified _PVGSLAGIGEVLGK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.8875 2 648.879727 1295.7449 73123.67 0.85221 0.00055298 -0.25332 -0.00016438 0.59889 0.00038861 648.879999441822 652.886710284679 105.18 2.3151 105.18 104.65 106.97 0 970 177 11 0 0 0 6.0517E-70 6 65395 208.17 156.73 1 0.89869 1.0809 0 1222300000 630430000 591910000 28152 181 10655 10946 44025;44026;44027;44028;44029;44030 44028 PVGSLAGIGEVLGK 14 1 0 Unmodified _PVGSLAGIGEVLGK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.881 2 648.879727 1295.7449 74725.95 0.93386 0.00060596 -0.21885 -0.00014201 0.71501 0.00046395 648.879956338187 652.886587584935 104.45 1.727 104.45 103.91 105.63 0 917 134 12 0 0 0 2.457E-70 4 65942 211.46 174.88 1 0.92845 1.0972 0 1386800000 744800000 641980000 28153 181 10655 10946 44031;44032;44033;44034 44032 PVGSLAGIGEVLGK 14 1 0 Unmodified _PVGSLAGIGEVLGK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.881 2 648.879727 1295.7449 74804.39 0.57172 0.00037097 -0.059512 -3.8616E-05 0.5122 0.00033236 648.879995350621 652.886632308951 116.99 1.9343 116.99 116.75 118.68 0 492 82 10 0 0 0 3.8966E-84 4 68735 224.66 179.06 1 0.93422 0.82596 0 296170000 150260000 145900000 28154 181 10655 10946 44035;44036;44037;44038 44036 PVGSLAGIGEVLGK 14 1 0 Unmodified _PVGSLAGIGEVLGK_ 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.8807 2 648.879727 1295.7449 75170.76 0.72737 0.00047198 -0.075526 -4.9007E-05 0.65184 0.00042297 648.879906789656 652.886666769149 116.8 1.9542 116.8 116.51 118.46 0 533 90 10 0 0 0 3.6724E-70 5 67671 210.35 167.96 1 0.94893 0.82466 0 315650000 160650000 155000000 28155 181 10655 10946 44039;44040;44041;44042;44043 44040 PVHHGVNQLK 10 1 0 Unmodified _PVHHGVNQLK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.5517 3 376.880602 1127.61998 96141.88 0.2234 8.4195E-05 -0.15667 -5.9046E-05 0.066728 2.5149E-05 376.880574326031 379.551916055604 16.235 1.3797 16.235 15.763 17.143 0 335 64 8 0 0 0 0.0011249 2 3433 63.534 63.534 1 0.88316 0.99582 0 112780000 58416000 54363000 28156 121 10656 10947 44044;44045 44045 PVHHGVNQLK 10 1 0 Unmodified _PVHHGVNQLK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.8236 2 564.817264 1127.61998 80207.94 0.76995 0.00043488 0.03609 2.0385E-05 0.80604 0.00045527 564.817122269472 568.824380687744 16.235 0.89241 16.235 15.822 16.714 0 247 46 8 0 0 0 0.00026732 2 3460 83.206 83.206 1 0.88016 0.98675 0 65250000 34229000 31021000 28157 121 10656 10947 44046;44047 44047 PVHHGVNQLK 10 1 0 Unmodified _PVHHGVNQLK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.5519 3 376.880602 1127.61998 98453.9 -0.23078 -8.6977E-05 -0.31301 -0.00011797 -0.54379 -0.00020494 376.880550911925 379.551868126605 15.175 0.94217 15.175 14.998 15.94 9.5367E-07 210 57 6 0 0 0 5.5298E-10 2 2847 130.31 106.94 1 0.92995 1.0904 0 326690000 173190000 153500000 28158 121 10656 10947 44048;44049 44049 PVHHGVNQLK 10 1 0 Unmodified _PVHHGVNQLK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8172 2 564.817264 1127.61998 81079.9 0.2483 0.00014025 -0.27396 -0.00015474 -0.025659 -1.4493E-05 564.817320387833 568.824331888167 15.177 0.59486 15.177 15.057 15.652 -9.5367E-07 107 27 9 0 0 0 1.7143E-30 2 2860 204.65 162.25 1 0.8834 1.0107 0 160570000 85400000 75172000 28159 121 10656 10947 44050;44051 44050 PVHHGVNQLK 10 1 0 Unmodified _PVHHGVNQLK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.8239 2 564.817264 1127.61998 79352.39 0.46294 0.00026148 -0.090898 -5.1341E-05 0.37204 0.00021013 564.817260652706 568.824206904963 15.856 0.78774 15.856 15.72 16.508 0 391 68 10 0 0 0 0.0020391 2 2929 75.738 75.738 1 0.80038 0.63504 0 18889000 10658000 8231500 28160 121 10656 10947 44052;44053 44053 PVHHGVNQLK 10 1 0 Unmodified _PVHHGVNQLK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 376.8806 3 376.880602 1127.61998 95446.78 -0.30704 -0.00011572 -0.0086435 -3.2576E-06 -0.31568 -0.00011897 376.880777189846 379.551991432477 15.626 0.78169 15.626 15.507 16.289 0 269 68 10 0 0 0 4.3741E-06 2 2631 102.07 102.07 1 0.75749 0.63387 0 45121000 25254000 19868000 28161 121 10656 10947 44054;44055 44055 PVHHGVNQLK 10 1 0 Unmodified _PVHHGVNQLK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.8176 2 564.817264 1127.61998 78512.52 0.14613 8.2534E-05 0.12496 7.0577E-05 0.27108 0.00015311 564.817470196461 568.824279735673 15.601 0.6312 15.601 15.399 16.031 -9.5367E-07 191 49 10 0 0 0 5.7859E-12 2 2632 161.9 161.9 1 0.73586 0.60843 0 32446000 17813000 14633000 28162 121 10656 10947 44056;44057 44056 PVHLTAFLGYK 11 1 0 Unmodified _PVHLTAFLGYK_ 0 0 0 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.9041 3 415.904524 1244.69174 94606.51 0.27987 0.0001164 -0.14119 -5.8722E-05 0.13867 5.7675E-05 415.904232732421 418.575707376277 86.979 1.5517 86.979 86.63 88.181 0 544 135 8 0 0 0 0.00024898 3 52780 72.321 62.367 1 0.99082 1.118 0 110610000 53449000 57160000 28163 1554;936 10657 10948 44058;44059;44060 44059 PVHLTAFLGYK 11 1 0 Unmodified _PVHLTAFLGYK_ 0 0 0 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.9045 3 415.904524 1244.69174 93882.6 0.34299 0.00014265 0.32461 0.000135 0.66759 0.00027765 415.904459083156 418.575963768278 88.926 0.3219 88.926 88.75 89.072 0 104 22 6 0 0 0 0.0027005 1 53708 50.194 50.194 1 0.88051 0.87236 0 25865000 12152000 13712000 28164 1554;936 10657 10948 44061 44061 PVHLTAFLGYK 11 1 0 Unmodified _PVHLTAFLGYK_ 0 0 0 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.9044 3 415.904524 1244.69174 94491.28 0.60497 0.00025161 -0.56137 -0.00023348 0.043599 1.8133E-05 415.904222904302 418.575730060348 145.27 0.2403 145.27 145.26 145.5 0 30 8 8 0 0 0 0.0025474 2 91335 51.092 51.092 1 0.96877 1.0872 0 67155000 34834000 32321000 28165 1554;936 10657 10948 44062;44063 44063 PVHLTAFLGYK 11 1 0 Unmodified _PVHLTAFLGYK_ 0 0 0 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.5753 3 415.904524 1244.69174 92487.37 0.38444 0.00015989 -0.3419 -0.0001422 0.042545 1.7695E-05 415.904372139585 418.57568028854 85.388 1.7055 85.388 84.522 86.227 0 754 139 8 0 0 0 7.3887E-05 4 53122 72.434 72.434 1 0.98348 1.1488 0 278150000 144140000 134020000 28166 1554;936 10657 10948 44064;44065;44066;44067 44067 PVHLTAFLGYK 11 1 0 Unmodified _PVHLTAFLGYK_ 0 0 0 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.9103 3 415.904524 1244.69174 95320.43 0.64058 0.00026642 0.072328 3.0082E-05 0.71291 0.0002965 415.904081566895 418.575723082743 87.811 0.41918 87.811 87.544 87.963 0 76 30 4 0 0 0 0.0020567 2 53974 42.21 41.704 1 0.84043 0.87535 0 10005000 3876000 6129200 28167 1554;936 10657 10948 44068;44069 44068 PVHLTAFLGYK 11 1 0 Unmodified _PVHLTAFLGYK_ 0 0 0 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.9037 3 415.904524 1244.69174 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.345 1 86.345 85.845 86.845 0 0 0 0 0.00020363 1 53219 64.73 43.731 1 28168 1554;936 10657 10948 44070 44070 PVHLTAFLGYK 11 1 0 Unmodified _PVHLTAFLGYK_ 0 0 0 P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 418.5758 3 415.904524 1244.69174 91831.46 -0.15178 -6.3125E-05 0.1081 4.4958E-05 -0.043679 -1.8166E-05 415.904513121646 418.57591302625 98.29 1.768 98.29 97.748 99.516 0 535 109 9 0 0 0 0.03759 1 55605 18.625 18.625 1 1.0433 0.85214 0 33495000 16789000 16705000 28169 1554;936 10657 10948 44071 44071 PVIACSVTIK 10 1 0 Unmodified _PVIACSVTIK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3123 2 544.312635 1086.61072 82312.93 0.40906 0.00022266 -0.10992 -5.9829E-05 0.29915 0.00016283 544.312452495559 548.319751876121 65.238 0.72565 65.238 64.949 65.675 0 265 64 5 0 0 0 2.2309E-06 2 37529 111.06 63.979 1 0.6532 0.67579 0 29217000 18544000 10673000 28170 812 10658 10949 44072;44073 44072 PVIACSVTIK 10 1 0 Unmodified _PVIACSVTIK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.3125 2 544.312635 1086.61072 82627.56 0.49697 0.00027051 0.046297 2.52E-05 0.54327 0.00029571 544.312531809017 548.319827009403 64.031 0.89515 64.031 63.686 64.581 -7.6294E-06 296 83 5 0 0 0 8.365E-07 2 37592 112.11 70.678 1 0.65502 0.71071 0 39134000 22100000 17034000 28171 812 10658 10949 44074;44075 44074 PVIACSVTIK 10 1 0 Unmodified _PVIACSVTIK_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.3129 2 544.312635 1086.61072 82828.96 0.65936 0.0003589 -0.13926 -7.58E-05 0.5201 0.0002831 544.312534443039 548.319518142883 75.018 0.76477 75.018 74.667 75.432 0 242 56 6 0 0 0 0.0043069 1 39889 61.691 27.439 1 0.91055 0.71915 0 6042100 3249700 2792400 28172 812 10658 10949 44076 44076 PVLMALAEGPGAEGPR 16 0 1 Oxidation (M) _PVLM(ox)ALAEGPGAEGPR_ PVLM(1)ALAEGPGAEGPR PVLM(68.36)ALAEGPGAEGPR 0 1 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.4141 2 790.90869 1579.80283 NaN NaN NaN 0.40197 0.00031792 NaN NaN NaN NaN 78.233 0.30589 78.233 78.112 78.418 0 0 0 0 8.6526E-05 1 47378 68.355 59.401 1 NaN NaN 0 2708500 0 2708500 28173 862 10659 10950 44077 44077 673 PVLNFYEANFPANVMDVIAR 20 0 1 Oxidation (M) _PVLNFYEANFPANVM(ox)DVIAR_ PVLNFYEANFPANVM(1)DVIAR PVLNFYEANFPANVM(54.52)DVIAR 0 1 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3KRX8 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1154.0798 2 1148.57517 2295.13579 56892.08 0.31912 0.00036654 0.13509 0.00015516 0.45421 0.0005217 1149.07635774759 1153.57888432946 126.1 0.61156 126.1 125.65 126.26 -7.6294E-06 128 44 5 0 0 0 2.9474E-06 1 82009 54.524 54.524 1 1.75 1.78 0 7279000 1985700 5293400 28174 1009 10660 10951 44078 44078 798 PVLNFYEANFPANVMDVIAR 20 0 1 Oxidation (M) _PVLNFYEANFPANVM(ox)DVIAR_ PVLNFYEANFPANVM(1)DVIAR PVLNFYEANFPANVM(77.18)DVIAR 0 1 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3KRX8 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1154.0835 2 1148.57517 2295.13579 NaN NaN NaN -0.47815 -0.00054919 NaN NaN NaN NaN 125.78 0.38078 125.78 125.57 125.95 0 0 0 0 8.617E-08 1 81758 77.185 69.319 1 NaN NaN 0 4873800 0 4873800 28175 1009 10660 10951 44079 44079 798 PVLNFYEANFPANVMDVIAR 20 0 1 Oxidation (M) _PVLNFYEANFPANVM(ox)DVIAR_ PVLNFYEANFPANVM(1)DVIAR PVLNFYEANFPANVM(98.53)DVIAR 0 1 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3KRX8 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1154.0811 2 1148.57517 2295.13579 56025.3 0.25518 0.0002931 0.16462 0.00018908 0.4198 0.00048217 1148.57685551638 1153.57918457714 125.4 0.34653 125.4 125.23 125.57 -7.6294E-06 95 24 6 0 0 0 5.7395E-10 1 83494 98.531 93.64 1 2.2723 2.286 0 9307600 3198700 6108900 28176 1009 10660 10951 44080 44080 798 PVLTQESATYIAEEYSR 17 0 1 Unmodified _PVLTQESATYIAEEYSR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46;Q7Z6P5 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.9804 2 978.981095 1955.94764 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.33 1 95.33 94.83 95.83 7.6294E-06 0 0 0 0.00039617 1 57967 69.03 60.62 1 28177 568 10661 10952 44081 44081 PVLTQESATYIAEEYSR 17 0 1 Unmodified _PVLTQESATYIAEEYSR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46;Q7Z6P5 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.9778 2 978.981095 1955.94764 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.622 1 95.622 95.122 96.122 7.6294E-06 0 0 0 2.6979E-08 1 58188 105 94.392 1 28178 568 10661 10952 44082 44082 PVLTQESATYIAEEYSR 17 0 1 Unmodified _PVLTQESATYIAEEYSR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46;Q7Z6P5 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 979.4889 2 978.981095 1955.94764 NaN NaN NaN -0.12686 -0.00012419 NaN NaN NaN NaN 94.788 0.43509 94.788 94.564 94.999 0 0 0 0 4.7727E-13 3 58879 111.12 105.09 1 NaN NaN 0 8351700 8351700 0 28179 568 10661 10952 44083;44084;44085 44084 PVLTQESATYIAEEYSR 17 0 1 Unmodified _PVLTQESATYIAEEYSR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46;Q7Z6P5 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 984.4861 2 978.981095 1955.94764 NaN NaN NaN -0.50803 -0.00049735 NaN NaN NaN NaN 109.14 0.45216 109.14 109.01 109.46 0 0 0 0 0.00079563 1 62815 62.924 47.722 1 NaN NaN 0 1878900 0 1878900 28180 568 10661 10952 44086 44086 PVLTQESATYIAEEYSR 17 0 1 Unmodified _PVLTQESATYIAEEYSR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46;Q7Z6P5 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 984.49 2 978.981095 1955.94764 NaN NaN NaN -1.3029 -0.0012755 NaN NaN NaN NaN 109.2 0.49216 109.2 108.98 109.47 0 0 0 0 0.0031776 1 61958 53.252 39.824 1 NaN NaN 0 1539000 0 1539000 28181 568 10661 10952 44087 44087 PVPAVPVQK 9 1 0 Unmodified _PVPAVPVQK_ 0 0 0 A0A024RCS7;Q9BW19;B4E063;A2AB20;A0A140T9E6 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.7894 2 467.789653 933.564752 NaN NaN NaN -0.23527 -0.00011006 NaN NaN NaN NaN 42.949 0.55752 42.949 42.559 43.117 0 0 0 0 0.021801 1 23189 57.471 44.483 1 NaN NaN 0 16215000 16215000 0 28182 371 10662 10953 44088 44088 PVPGFQVAYVVFQK 14 1 0 Unmodified _PVPGFQVAYVVFQK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.9388 2 789.937576 1577.8606 69378.05 0.82573 0.00065227 0.2647 0.00020909 1.0904 0.00086137 789.937703085254 793.944724786864 119.81 0.58577 119.81 119.54 120.13 -7.6294E-06 243 39 8 0 0 0 8.811E-05 2 77035 87.258 87.258 1 1.011 1.0927 0 35376000 17355000 18021000 28183 2133 10663 10954 44089;44090 44090 PVPGFQVAYVVFQK 14 1 0 Unmodified _PVPGFQVAYVVFQK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.9448 2 789.937576 1577.8606 69047.21 0.98248 0.0007761 0.053638 4.2371E-05 1.0361 0.00081847 789.937568512319 793.944456940882 119.27 0.51062 119.27 119.04 119.55 0 231 35 8 0 0 0 8.6094E-38 2 78575 170.47 170.47 1 1.083 1.2084 0 52367000 25159000 27208000 28184 2133 10663 10954 44091;44092 44092 PVPGFQVAYVVFQK 14 1 0 Unmodified _PVPGFQVAYVVFQK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.9453 2 789.937576 1577.8606 68369.58 1.0042 0.00079324 -0.44603 -0.00035233 0.55815 0.00044091 789.937334561883 793.94452111621 132.19 0.63951 132.19 131.98 132.61 0 169 29 9 0 0 0 0.0064839 1 80423 42.001 42.001 1 1.2436 0.96391 0 12946000 6009500 6936100 28185 2133 10663 10954 44093 44093 PVPGFQVAYVVFQK 14 1 0 Unmodified _PVPGFQVAYVVFQK_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.9454 2 789.937576 1577.8606 68856.85 1.1952 0.00094415 -0.085915 -6.7868E-05 1.1093 0.00087628 790.438296701393 793.944635142173 131.94 0.85394 131.94 131.69 132.54 0 172 36 8 0 0 0 0.00019465 1 79263 70.1 70.1 1 1.3381 1.076 0 13876000 5732300 8143300 28186 2133 10663 10954 44094 44094 PVPQVDEAETR 11 0 1 Unmodified _PVPQVDEAETR_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.8135 2 620.812042 1239.60953 76605.47 0.79862 0.00049579 -0.48336 -0.00030008 0.31526 0.00019572 620.811807053854 625.815679840672 35.612 0.60005 35.612 35.442 36.042 0 258 57 6 0 0 0 0.00026225 2 17890 90.108 90.108 1 1.0746 1.1947 0 74771000 33414000 41357000 28187 2063 10664 10955 44095;44096 44095 PVPQVDEAETR 11 0 1 Unmodified _PVPQVDEAETR_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.8123 2 620.812042 1239.60953 77047.16 0.65874 0.00040895 -0.11198 -6.9515E-05 0.54677 0.00033944 620.811990139744 625.8162609337 35.034 0.5882 35.034 34.677 35.265 0 247 50 7 0 0 0 0.00026225 2 17669 90.108 90.108 1 1.1642 1.3374 0 78202000 38455000 39747000 28188 2063 10664 10955 44097;44098 44097 PVPQVDEAETR 11 0 1 Unmodified _PVPQVDEAETR_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.8118 2 620.812042 1239.60953 76998.71 0.39357 0.00024434 0.014374 8.9234E-06 0.40795 0.00025326 620.812153180749 625.816099224201 40.884 0.76833 40.884 40.669 41.438 0 256 60 7 0 0 0 0.00044841 2 18906 77.677 68.814 1 1.3459 1.101 0 13530000 5977800 7551800 28189 2063 10664 10955 44099;44100 44100 PVPQVDEAETR 11 0 1 Unmodified _PVPQVDEAETR_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.8156 2 620.812042 1239.60953 NaN NaN NaN 0.15353 9.5312E-05 NaN NaN NaN NaN 41.05 0.87362 41.05 40.862 41.736 0 0 0 0 0.0073619 1 18408 62.463 38.308 1 NaN NaN 0 4476800 0 4476800 28190 2063 10664 10955 44101 44101 PVQDLIK 7 1 0 Unmodified _PVQDLIK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.7546 2 406.747453 811.480354 93849.74 -0.24319 -9.8917E-05 -0.60479 -0.000246 -0.84798 -0.00034491 406.747485402548 410.754577749448 47.687 1.154 47.687 47.289 48.443 0 424 80 11 0 0 0 0.027085 1 26348 87.323 50.294 1 0.6679 0.78404 0 342720000 196290000 146420000 28191 139 10665 10956 44102 44102 PVQDLIK 7 1 0 Unmodified _PVQDLIK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 406.7471 2 406.747453 811.480354 93669.19 -0.0024989 -1.0164E-06 0.097796 3.9778E-05 0.095297 3.8762E-05 406.74739256161 410.754492527005 55.52 1.8472 55.52 55.149 56.996 -3.8147E-06 449 119 6 0 0 0 0.03096 2 27734 67.903 27.211 1 1.1638 0.93086 0 20570000 9166600 11404000 28192 139 10665 10956 44103;44104 44103 PVQDLIK 7 1 0 Unmodified _PVQDLIK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 410.7544 2 406.747453 811.480354 95231.28 -0.19737 -8.0281E-05 -0.12564 -5.1103E-05 -0.32301 -0.00013138 406.74746779996 410.754555885567 55.826 1.9087 55.826 55.336 57.244 0 496 124 8 0 0 0 0.029214 2 27296 70.69 25.717 1 1.0982 0.88247 0 16504000 8262200 8241300 28193 139 10665 10956 44105;44106 44105 PVQLFK 6 1 0 Unmodified _PVQLFK_ 0 0 0 A0A024R667;Q96FK6;G3V4B8 A0A024R667 A0A024R667 C14orf150;WDR89 WD repeat-containing protein 89 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 366.2258 2 366.226157 730.437761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.401 1 51.401 50.901 51.901 0 0 0 0 0.033588 1 29140 85.909 9.3564 1 28194 198 10666 10957 44107 44107 PVQTSAVTGQASTGPVTQIIQTK 23 1 0 Unmodified _PVQTSAVTGQASTGPVTQIIQTK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1161.1359 2 1156.62645 2311.23834 57046.74 -0.023482 -2.716E-05 0.36294 0.00041978 0.33946 0.00039262 1157.12790980525 1161.13556423902 103.39 0.4795 103.39 103.13 103.61 0 120 29 6 0 0 0 0.0017981 1 58736 32.191 32.191 1 1.3675 1.0844 0 4629800 1802400 2827400 28195 680 10667 10958 44108 44108 PVQTSAVTGQASTGPVTQIIQTK 23 1 0 Unmodified _PVQTSAVTGQASTGPVTQIIQTK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1160.6327 2 1156.62645 2311.23834 57713.52 -0.065856 -7.6171E-05 -0.11106 -0.00012846 -0.17692 -0.00020463 1157.12787094133 1160.63369596379 103.18 0.4481 103.18 102.99 103.43 0 145 30 6 0 0 0 0.0017569 1 57737 32.302 32.302 1 1.44 1.148 0 4090900 1435700 2655200 28196 680 10667 10958 44109 44109 PVSFLPQNK 9 1 0 Unmodified _PVSFLPQNK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.2973 2 515.290017 1028.56548 NaN NaN NaN -0.93009 -0.00047927 NaN NaN NaN NaN 61.02 0.4062 61.02 60.815 61.222 3.8147E-06 0 0 0 2.511E-05 1 34787 109.36 85.928 1 NaN NaN 0 11633000 0 11633000 28197 1412 10668 10959 44110 44110 PVSFLPQNK 9 1 0 Unmodified _PVSFLPQNK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.2977 2 515.290017 1028.56548 84577.93 0.49133 0.00025318 0.023901 1.2316E-05 0.51523 0.00026549 515.289949273609 519.296537438926 59.799 0.49298 59.799 59.6 60.093 -3.8147E-06 162 41 8 0 0 0 2.5503E-05 1 34743 113.5 113.5 1 1.0616 1.0713 0 26888000 13110000 13778000 28198 1412 10668 10959 44111 44111 PVSPLLLASGMAR 13 0 1 Oxidation (M) _PVSPLLLASGM(ox)AR_ PVSPLLLASGM(1)AR PVSPLLLASGM(99.52)AR 0 1 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0;G3V4N7;B4DNF8;B4DUP1;B2R892;P06732 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB;CKM Creatine kinase B-type;Creatine kinase M-type;Creatine kinase M-type, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.3788 2 664.373755 1326.73296 NaN NaN NaN -0.068699 -4.5642E-05 NaN NaN NaN NaN 89.049 0.36247 89.049 88.973 89.335 0 0 0 0 2.6245E-06 1 53730 99.522 70.435 1 NaN NaN 0 21472000 0 21472000 28199 557 10669 10960 44112 44112 415 PVSPLLLASGMAR 13 0 1 Oxidation (M) _PVSPLLLASGM(ox)AR_ PVSPLLLASGM(1)AR PVSPLLLASGM(79.82)AR 0 1 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0;G3V4N7;B4DNF8;B4DUP1;B2R892;P06732 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB;CKM Creatine kinase B-type;Creatine kinase M-type;Creatine kinase M-type, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.3785 2 664.373755 1326.73296 73234.09 0.75489 0.00050153 0.29373 0.00019515 1.0486 0.00069668 664.876223416352 669.378018841004 87.9 0.32826 87.9 87.817 88.145 7.6294E-06 45 26 5 0 0 0 6.3735E-05 1 54216 79.82 69.867 1 8.6166 8.9992 0 22497000 3744200 18753000 28200 557 10669 10960 44113 44113 415 PVSPLLTAAGMAR 13 0 1 Oxidation (M) _PVSPLLTAAGM(ox)AR_ PVSPLLTAAGM(1)AR PVSPLLTAAGM(42.34)AR 0 1 0 P12532;B7Z9T7;B4DJW9;B4DF72;B4DGR9;B4DFE8;E9PCP8;B4DH34;F8WCN3;B4DF55 P12532 P12532 CKMT1A;CKMT1B Creatine kinase U-type, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.3588 2 650.358105 1298.70166 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.491 1 73.491 72.991 73.991 0 0 0 0 0.019756 1 44136 42.336 16.777 1 28201 1475 10670 10961 44114 44114 1218 PVSSAASVYAGAGGSGSR 18 0 1 Unmodified _PVSSAASVYAGAGGSGSR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.3929 2 790.8868 1579.75905 68046.6 0.88642 0.00070106 -0.062037 -4.9065E-05 0.82439 0.000652 790.886854182544 795.89085236366 38.617 0.73306 38.617 38.335 39.068 0 419 60 10 0 0 0 3.0588E-93 2 19733 212.17 201.62 1 1.2339 1.4617 0 453210000 209060000 244140000 28202 316 10671 10962 44115;44116 44115 PVSSAASVYAGAGGSGSR 18 0 1 Unmodified _PVSSAASVYAGAGGSGSR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.3875 2 790.8868 1579.75905 NaN NaN NaN -3.1431 -0.0024858 NaN NaN NaN NaN 39.284 0.13015 39.284 39.207 39.337 0 0 0 0 0.021515 1 20287 37.793 25.734 1 NaN NaN 0 5222200 5222200 0 28203 316 10671 10962 44117 44117 PVSSAASVYAGAGGSGSR 18 0 1 Unmodified _PVSSAASVYAGAGGSGSR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.891 2 790.8868 1579.75905 67901.34 0.48983 0.0003874 0.2259 0.00017866 0.71573 0.00056606 790.88709450836 795.891049618275 37.665 0.85146 37.665 37.381 38.233 -3.8147E-06 395 66 10 0 0 0 6.0806E-51 3 19469 171.36 164.63 1 1.1557 1.3551 0 763310000 369270000 394040000 28204 316 10671 10962 44118;44119;44120 44119 PVSSAASVYAGAGGSGSR 18 0 1 Unmodified _PVSSAASVYAGAGGSGSR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.8911 2 790.8868 1579.75905 68086.5 0.6254 0.00049462 0.10127 8.0096E-05 0.72667 0.00057472 790.886860892671 795.890964860809 44.507 1.5242 44.507 44.123 45.648 0 580 108 10 0 0 0 3.4576E-13 3 21054 112.42 108.25 1 1.6697 1.4373 0 55109000 19544000 35565000 28205 316 10671 10962 44121;44122;44123 44121 PVSSAASVYAGAGGSGSR 18 0 1 Unmodified _PVSSAASVYAGAGGSGSR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 790.8869 2 790.8868 1579.75905 67450.02 0.89784 0.00071009 -0.25909 -0.00020491 0.63876 0.00050518 790.886612829568 795.890681536317 44.771 1.6188 44.771 44.385 46.004 0 577 111 10 0 0 0 2.4584E-16 5 20657 115.34 113.52 1 1.7089 1.4912 0 64868000 25481000 39387000 28206 316 10671 10962 44124;44125;44126;44127;44128 44125 PVTDFFLQLVDAGK 14 1 0 Unmodified _PVTDFFLQLVDAGK_ 0 0 0 E5KNY5;P42704 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.0834 2 775.416674 1548.81879 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.34 1 133.34 132.84 133.84 0 0 0 0 0.052881 1 89524 50.284 31.013 1 28207 1207 10672 10963 44129 44129 PVTQVTWHGR 10 0 1 Unmodified _PVTQVTWHGR_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.5485 3 394.21224 1179.61489 96481.11 0.31221 0.00012308 -0.14933 -5.8869E-05 0.16288 6.4209E-05 394.212309514775 397.548342372868 30.853 0.54371 30.853 30.576 31.12 0 140 46 4 0 0 0 0.00070155 3 15200 57.347 48.025 1 0.74239 0.74464 0 17628000 10057000 7570600 28208 1726 10673 10964 44130;44131;44132 44131 PVTTPEEIAQVATISANGDK 20 1 0 Unmodified _PVTTPEEIAQVATISANGDK_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z4F6;B7Z532;B9VPB4;B9VP19;E7EXB4;Q53SE2;E7ESH4 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1025.5338 2 1021.02603 2040.03751 60310.29 0.46971 0.00047958 0.1516 0.00015478 0.6213 0.00063437 1021.52783532546 1025.53449147029 102.34 0.32241 102.34 102.17 102.49 0 73 26 4 0 0 0 7.2368E-06 1 63015 65.043 59.727 1 1.1347 1.1573 0 10421000 4165300 6255900 28209 143 10674 10965 44133 44133 PVTTPEEIAQVATISANGDK 20 1 0 Unmodified _PVTTPEEIAQVATISANGDK_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z4F6;B7Z532;B9VPB4;B9VP19;E7EXB4;Q53SE2;E7ESH4 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1025.5336 2 1021.02603 2040.03751 NaN NaN NaN 1.1945 0.0012196 NaN NaN NaN NaN 101.76 0.39318 101.76 101.52 101.91 7.6294E-06 0 0 0 1.963E-13 2 64082 94.09 72.532 1 NaN NaN 0 5457000 0 5457000 28210 143 10674 10965 44134;44135 44135 PVTTVQPVFNLAAYHQLFVGTER 23 0 1 Unmodified _PVTTVQPVFNLAAYHQLFVGTER_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.4626 3 863.127096 2586.35946 65997.37 1.0575 0.00091272 -0.51356 -0.00044327 0.54389 0.00046945 863.460766507675 866.797895720636 120.85 0.43478 120.85 120.6 121.04 7.6294E-06 127 31 9 0 0 0 1.5039E-09 3 78014 73.672 73.672 1 0.65802 0.68818 0 13004000 7712300 5291600 28211 2045 10675 10966 44136;44137;44138 44137 PVTTVQPVFNLAAYHQLFVGTER 23 0 1 Unmodified _PVTTVQPVFNLAAYHQLFVGTER_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.1328 3 863.127096 2586.35946 67634.78 0.9941 0.00085803 -0.34517 -0.00029793 0.64892 0.0005601 863.460678686728 866.7972132208 120.33 0.38822 120.33 120.12 120.51 7.6294E-06 143 27 8 0 0 0 6.069E-09 4 79433 62.099 62.099 1 0.66898 0.66375 0 15941000 8047600 7893500 28212 2045 10675 10966 44139;44140;44141;44142 44141 PVTTVQPVFNLAAYHQLFVGTER 23 0 1 Unmodified _PVTTVQPVFNLAAYHQLFVGTER_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 866.7972 3 863.127096 2586.35946 NaN NaN NaN -0.61052 -0.00052695 NaN NaN NaN NaN 133.24 0.293 133.24 133.1 133.39 0 0 0 0 3.5558E-05 1 81090 44.848 33.389 1 NaN NaN 0 4201400 0 4201400 28213 2045 10675 10966 44143 44143 PVTTVQPVFNLAAYHQLFVGTER 23 0 1 Unmodified _PVTTVQPVFNLAAYHQLFVGTER_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 866.4625 3 863.127096 2586.35946 NaN NaN NaN -0.85252 -0.00073583 NaN NaN NaN NaN 132.91 0.30728 132.91 132.74 133.04 0 0 0 0 2.1718E-07 1 79945 60.991 46.53 1 NaN NaN 0 3323700 0 3323700 28214 2045 10675 10966 44144 44144 PVTVEPMDQLDDEEGLPEK 19 1 0 Oxidation (M) _PVTVEPM(ox)DQLDDEEGLPEK_ PVTVEPM(1)DQLDDEEGLPEK PVTVEPM(112.43)DQLDDEEGLPEK 0 1 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1083.0059 2 1078.99882 2155.9831 58687.54 0.18117 0.00019548 0.043471 4.6906E-05 0.22464 0.00024239 1079.50089489175 1083.50728853241 79.072 0.4481 79.072 78.833 79.281 -7.6294E-06 169 42 6 0 0 0 8.6093E-14 2 46757 112.43 112.43 1 1.8392 1.9752 0 39495000 11426000 28069000 28215 573 10676 10967 44145;44146 44145 428 PVTVEPMDQLDDEEGLPEK 19 1 0 Oxidation (M) _PVTVEPM(ox)DQLDDEEGLPEK_ PVTVEPM(1)DQLDDEEGLPEK PVTVEPM(117.93)DQLDDEEGLPEK 0 1 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1083.0061 2 1078.99882 2155.9831 59086.64 0.22628 0.00024415 0.61484 0.00066341 0.84111 0.00090756 1080.00371533499 1083.0058445485 79.729 0.44778 79.729 79.541 79.989 0 211 38 8 0 0 0 4.6523E-17 2 47276 117.93 117.93 1 1.6299 1.5966 0 21852000 8379300 13473000 28216 573 10676 10967 44147;44148 44147 428 PVTVEPMDQLDDEEGLPEK 19 1 0 Oxidation (M) _PVTVEPM(ox)DQLDDEEGLPEK_ PVTVEPM(1)DQLDDEEGLPEK PVTVEPM(105)DQLDDEEGLPEK 0 1 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1079.5012 2 1078.99882 2155.9831 58641.42 -0.046093 -4.9734E-05 0.3652 0.00039405 0.31911 0.00034432 1079.50103022012 1083.50805068181 78.194 0.42676 78.194 77.981 78.408 0 166 36 7 0 0 0 2.5814E-12 2 47386 105 105 1 2.0722 2.1272 0 25392000 8728900 16663000 28217 573 10676 10967 44149;44150 44150 428 PVTVEPMDQLDDEEGLPEK 19 1 0 Oxidation (M) _PVTVEPM(ox)DQLDDEEGLPEK_ PVTVEPM(1)DQLDDEEGLPEK PVTVEPM(125.61)DQLDDEEGLPEK 0 1 0 A8K525;A0A0S2Z4Z9;Q15233;H7C367 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1083.5066 2 1078.99882 2155.9831 59039.53 0.42965 0.00046359 0.45226 0.00048799 0.88191 0.00095158 1080.00345713934 1083.50712501511 78.911 0.52341 78.911 78.674 79.198 7.6294E-06 261 44 8 0 0 0 1.1624E-22 3 47840 125.61 125.61 1 1.5138 1.6168 0 21023000 9328100 11695000 28218 573 10676 10967 44151;44152;44153 44151 428 PVVGIIYPPPEVR 13 0 1 Unmodified _PVVGIIYPPPEVR_ 0 0 0 A0A024R1K8;Q15459;F8WB66 A0A024R1K8 A0A024R1K8 SF3A1 Splicing factor 3A subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.4237 2 718.41902 1434.82349 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.69 1 104.69 104.19 105.19 0 0 0 0 0.0010443 1 64721 77.662 55.021 1 28219 79 10677 10968 44154 44154 PVVGIIYPPPEVR 13 0 1 Unmodified _PVVGIIYPPPEVR_ 0 0 0 A0A024R1K8;Q15459;F8WB66 A0A024R1K8 A0A024R1K8 SF3A1 Splicing factor 3A subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.4227 2 718.41902 1434.82349 NaN NaN NaN -0.13109 -9.4178E-05 NaN NaN NaN NaN 103.87 0.39534 103.87 103.64 104.04 0 0 0 0 0.00047667 2 65655 83.869 72.379 1 NaN NaN 0 2627600 0 2627600 28220 79 10677 10968 44155;44156 44155 PVVSFIAGLTAPPGR 15 0 1 Unmodified _PVVSFIAGLTAPPGR_ 0 0 0 Q6IAL5;B2R8A1;A8K4W7;P53597 Q6IAL5 Q6IAL5 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.4321 2 741.427376 1480.8402 73022.05 0.67048 0.00049711 0.59285 0.00043955 1.2633 0.00093667 741.42734553552 746.431548101694 114.59 0.47981 114.59 114.39 114.87 -7.6294E-06 155 33 7 0 0 0 1.5666E-05 1 72683 110.08 110.08 1 1.9887 2.0822 0 10859000 3435700 7423500 28221 743 10678 10969 44157 44157 PVVSFIAGLTAPPGR 15 0 1 Unmodified _PVVSFIAGLTAPPGR_ 0 0 0 Q6IAL5;B2R8A1;A8K4W7;P53597 Q6IAL5 Q6IAL5 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.4316 2 741.427376 1480.8402 72860.72 0.67456 0.00050014 0.74533 0.00055261 1.4199 0.0010527 741.427793733644 746.431610901387 114.02 0.50333 114.02 113.78 114.29 0 159 37 7 0 0 0 1.5666E-05 1 73988 110.08 110.08 1 2.117 2.1269 0 11155000 2813700 8340800 28222 743 10678 10969 44158 44158 PVVSFIAGLTAPPGR 15 0 1 Unmodified _PVVSFIAGLTAPPGR_ 0 0 0 Q6IAL5;B2R8A1;A8K4W7;P53597 Q6IAL5 Q6IAL5 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 741.4273 2 741.427376 1480.8402 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.85 1 125.85 125.35 126.35 -7.6294E-06 0 0 0 0.015977 1 74718 44.299 25.988 1 28223 743 10678 10969 44159 44159 PVVVYR 6 0 1 Unmodified _PVVVYR_ 0 0 0 A0A087WSW7;F6XU50;Q6I7N8;A0A0B4J1V9;Q9NRZ9;Q9NW36 A0A087WSW7 A0A087WSW7 HELLS Lymphoid-specific helicase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 366.7239 2 366.723781 731.43301 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.491 1 32.491 31.991 32.991 0 0 0 0 0.034194 1 16117 80.317 46.824 1 28224 400 10679 10970 44160 44160 PVWYSPK 7 1 0 Unmodified _PVWYSPK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.7413 2 438.734346 875.454139 90290.66 0.14501 6.3621E-05 0.58969 0.00025872 0.7347 0.00032234 438.734286490191 442.741779771343 49.014 0.35535 49.014 48.834 49.19 0 74 29 4 0 0 0 0.026928 1 27513 82.913 63.067 1 2.314 2.3642 0 17295000 4382700 12913000 28225 1454 10680 10971 44161 44161 PVYHAITK 8 1 0 Unmodified _PVYHAITK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 310.1799 3 310.179877 927.517802 108719.1 -0.22627 -7.0183E-05 0.17902 5.553E-05 -0.047241 -1.4653E-05 310.179908852645 312.851257540538 20.841 0.48414 20.841 20.682 21.166 -1.9073E-06 83 21 7 0 0 0 0.0064263 2 7231 49.833 31.801 1 0.87804 0.89716 0 28286000 13420000 14866000 28226 1411 10681 10972 44162;44163 44162 PVYHAITK 8 1 0 Unmodified _PVYHAITK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.7729 2 464.766178 927.517802 89245.38 0.014632 6.8002E-06 0.0021932 1.0193E-06 0.016825 7.8196E-06 464.766267992064 468.772953114758 20.828 0.45878 20.828 20.708 21.166 0 60 20 7 0 0 0 0.0082471 1 7240 79.451 62.904 1 0.83728 0.82043 0 22348000 11997000 10352000 28227 1411 10681 10972 44164 44164 PVYHAITK 8 1 0 Unmodified _PVYHAITK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 310.1798 3 310.179877 927.517802 108082.3 0.35599 0.00011042 -0.032244 -1.0002E-05 0.32374 0.00010042 310.179779842356 312.851166209422 20.582 0.41197 20.582 20.417 20.829 0 57 12 7 0 0 0 0.0036725 2 6843 60.118 43.607 1 0.93681 0.94772 0 28929000 15296000 13632000 28228 1411 10681 10972 44165;44166 44166 PVYHAITK 8 1 0 Unmodified _PVYHAITK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 464.766 2 464.766178 927.517802 88565.26 -0.16494 -7.6659E-05 -0.77121 -0.00035843 -0.93615 -0.00043509 464.766271074125 468.773181182097 22.06 0.25634 22.06 21.919 22.175 1.9073E-06 27 8 5 0 0 0 0.056359 1 6501 41.429 41.429 1 0.76915 0.64237 0 1533200 878770 654420 28229 1411 10681 10972 44167 44167 PWIGLAEALGTLMR 14 0 1 Oxidation (M) _PWIGLAEALGTLM(ox)R_ PWIGLAEALGTLM(1)R PWIGLAEALGTLM(87.57)R 0 1 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.4254 2 772.418694 1542.82283 NaN NaN NaN 0.012898 9.9625E-06 NaN NaN NaN NaN 126.62 0.53459 126.62 126.35 126.88 0 0 0 0 4.4183E-05 1 82337 87.568 72.556 1 NaN NaN 0 4456800 0 4456800 28230 1382 10682 10973 44168 44168 1052 PWIGLAEALGTLMR 14 0 1 Oxidation (M) _PWIGLAEALGTLM(ox)R_ PWIGLAEALGTLM(1)R PWIGLAEALGTLM(81.02)R 0 1 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.426 2 772.418694 1542.82283 70002.09 0.96051 0.00074191 0.070528 5.4477E-05 1.031 0.00079639 772.92031386886 777.924499655089 126.09 0.57262 126.09 125.93 126.5 0 104 35 5 0 0 0 6.0529E-05 2 84218 81.017 81.017 1 4.5076 4.5576 0 9725100 1740000 7985100 28231 1382 10682 10973 44169;44170 44170 1052 PWISLPR 7 0 1 Unmodified _PWISLPR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.7559 2 434.755613 867.496673 89306.66 -0.2638 -0.00011469 0.63227 0.00027488 0.36847 0.0001602 434.756137714937 439.759667521456 89.114 1.2441 89.114 88.957 90.201 0 372 103 6 0 0 0 0.009923 4 53739 113.85 36.125 1 1.0527 1.2031 0 125720000 61053000 64667000 28232 824 10683 10974 44171;44172;44173;44174 44172 PWISLPR 7 0 1 Unmodified _PWISLPR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.757 2 434.755613 867.496673 89393.98 0.21752 9.4567E-05 0.66519 0.0002892 0.88271 0.00038376 434.756171880915 439.75967538252 87.912 0.95267 87.912 87.794 88.746 0 265 82 7 0 0 0 0.00095346 3 54203 137.83 57.454 1 0.95455 1.1068 0 309570000 149520000 160050000 28233 824 10683 10974 44175;44176;44177 44176 PWISLPR 7 0 1 Unmodified _PWISLPR_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.7562 2 434.755613 867.496673 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.65 1 88.65 88.15 89.15 0 0 0 0 0.032212 1 54678 73.039 28.508 1 28234 824 10683 10974 44178 44178 PYHLSTSSVFR 11 0 1 Unmodified _PYHLSTSSVFR_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 435.2273 3 431.891055 1292.65134 NaN NaN NaN 0.44787 0.00019343 NaN NaN NaN NaN 68.92 0.45299 68.92 68.745 69.198 0 0 0 0 0.035595 1 36038 35.523 32.021 1 NaN NaN 0 5829500 0 5829500 28235 1945 10684 10975 44179 44179 PYHLSTSSVFR 11 0 1 Unmodified _PYHLSTSSVFR_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 435.2271 3 431.891055 1292.65134 89974.55 -0.17306 -7.4742E-05 0.32536 0.00014052 0.15231 6.578E-05 431.891092357032 435.227224936671 69.305 0.53667 69.305 69.127 69.664 0 130 36 8 0 0 0 0.0097792 1 35494 37.995 32.679 1 2.7187 2.2578 0 7682900 2138400 5544600 28236 1945 10684 10975 44180 44180 PYIYGPTSQGER 12 0 1 Unmodified _PYIYGPTSQGER_ 0 0 0 G3V1S1;B3KTH1;B3KRG2;A8K359;P19447 G3V1S1 G3V1S1 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.3342 2 684.333141 1366.65173 76242.06 0.4644 0.0003178 -0.015813 -1.0822E-05 0.44859 0.00030698 684.333333007606 689.336873245004 52.952 0.50966 52.952 52.717 53.226 0 133 40 5 0 0 0 0.027473 2 26172 36.334 36.334 1 0.96269 0.84936 0 1615700 840330 775380 28237 717 10685 10976 44181;44182 44181 PYLEGSGCIAGVTVPSTR 18 0 1 Unmodified _PYLEGSGCIAGVTVPSTR_ 0 0 0 A0A075B730;A0A087X1U6 A0A075B730 A0A075B730 EPPK1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 937.9741 2 932.4671 1862.91965 NaN NaN NaN -0.94967 -0.00088554 NaN NaN NaN NaN 91.172 0.22768 91.172 91.037 91.265 0 0 0 0 1.2474E-06 1 56381 78.763 65.885 1 NaN NaN 0 6652900 0 6652900 28238 397 10686 10977 44183 44183 PYLISGADDR 10 0 1 Unmodified _PYLISGADDR_ 0 0 0 P35606;B4E2C9 P35606 P35606 COPB2 Coatomer subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.7814 2 553.77747 1105.54039 NaN NaN NaN 0.45009 0.00024925 NaN NaN NaN NaN 52.061 0.62075 52.061 51.829 52.45 0 0 0 0 0.0029859 2 28797 78.334 64.755 1 NaN NaN 0 7977100 0 7977100 28239 1545 10687 10978 44184;44185 44184 PYLPMIIAPLFR 12 0 1 Oxidation (M) _PYLPM(ox)IIAPLFR_ PYLPM(1)IIAPLFR PYLPM(79.91)IIAPLFR 0 1 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.4182 2 723.912516 1445.81048 76678.43 0.79901 0.00057842 -0.1423 -0.00010301 0.65671 0.0004754 723.912329670843 729.418000132917 131.73 0.66704 131.73 131.5 132.16 0 120 42 5 0 0 0 9.9645E-05 3 85916 84.476 84.476 1 1.7109 1.7702 0 6022200 2658800 3363400 28240 1412 10688 10979 44186;44187;44188 44186 1106 PYLPMIIAPLFR 12 0 1 Oxidation (M) _PYLPM(ox)IIAPLFR_ PYLPM(1)IIAPLFR PYLPM(98.39)IIAPLFR 0 1 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.913 2 723.912516 1445.81048 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.26 1 131.26 130.76 131.76 0 0 0 0 6.0033E-07 1 87818 98.392 78.063 1 28241 1412 10688 10979 44189 44189 1106 PYQCQYCEYR 10 0 1 Unmodified _PYQCQYCEYR_ 0 0 0 Q8WWU0;Q8WXB7;E9PEP7;A0A024RC04;B7ZKJ5;P17010;P08048 Q8WWU0 Q8WWU0 ZFX;ZFY Zinc finger X-chromosomal protein;Zinc finger Y-chromosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 738.7981 2 733.795011 1465.57547 80798.11 0.4658 0.0003418 -0.94407 -0.00069276 -0.47828 -0.00035096 733.79428730346 738.798269007674 38.991 0.17886 38.991 38.85 39.029 0 37 16 4 0 0 0 0.057124 1 17747 35.322 35.322 1 1.0915 0.95822 0 1761300 769890 991440 28242 351 10689 10980 44190 44190 PYQCQYCEYR 10 0 1 Unmodified _PYQCQYCEYR_ 0 0 0 Q8WWU0;Q8WXB7;E9PEP7;A0A024RC04;B7ZKJ5;P17010;P08048 Q8WWU0 Q8WWU0 ZFX;ZFY Zinc finger X-chromosomal protein;Zinc finger Y-chromosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.8 2 733.795011 1465.57547 72393.24 0.39737 0.00029159 -0.15887 -0.00011658 0.23851 0.00017502 733.794836561035 738.79909654841 39.294 0.31683 39.294 39.146 39.463 0 72 23 4 0 0 0 0.026516 1 17421 44.203 44.203 1 0.86972 0.75518 0 1235000 569930 665050 28243 351 10689 10980 44191 44191 PYSDGEGGIEDENR 14 0 1 Unmodified _PYSDGEGGIEDENR_ 0 0 0 Q92621;B4DE72 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.3246 2 769.323699 1536.63284 NaN NaN NaN -0.18899 -0.0001454 NaN NaN NaN NaN 27.694 0.16702 27.694 27.579 27.746 0 0 0 0 0.0033994 2 12847 62.303 34.682 1 NaN NaN 0 2743300 2743300 0 28244 1950 10690 10981 44192;44193 44192 PYSDGEGGIEDENR 14 0 1 Unmodified _PYSDGEGGIEDENR_ 0 0 0 Q92621;B4DE72 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.3233 2 769.323699 1536.63284 NaN NaN NaN -0.089795 -6.9082E-05 NaN NaN NaN NaN 27.209 0.14012 27.209 27.112 27.252 0 0 0 0 0.00039153 1 12534 79.82 51.422 1 NaN NaN 0 1902200 1902200 0 28245 1950 10690 10981 44194 44194 PYVEEGLHPQIIIR 14 0 1 Unmodified _PYVEEGLHPQIIIR_ 0 0 0 Q6IBT3;Q53HV2;Q99832;B7Z7I4;F8WAM2 Q6IBT3 Q6IBT3 CCT7 T-complex protein 1 subunit eta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.6462 3 555.31039 1662.90934 NaN NaN NaN 0.042428 2.3561E-05 NaN NaN NaN NaN 84.904 0.53694 84.904 84.653 85.19 0 0 0 0 0.0011151 1 52249 61.235 48.95 1 NaN NaN 0 11917000 0 11917000 28246 1791 10691 10982 44195 44195 PYVLNDLEAEASLPEK 16 1 0 Unmodified _PYVLNDLEAEASLPEK_ 0 0 0 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.9612 2 894.456724 1786.8989 65012.06 0.71583 0.00064027 1.1326 0.001013 1.8484 0.0016533 894.958971048674 898.966016281378 105.99 0.47926 105.99 105.78 106.26 0 109 34 5 0 0 0 1.8665E-06 1 65781 94.191 94.191 1 0.70558 0.72248 0 10556000 6299000 4257200 28247 2135 10692 10983 44196 44196 PYVPLLEAEEVR 12 0 1 Unmodified _PYVPLLEAEEVR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.888 2 707.882467 1413.75038 NaN NaN NaN 0.79343 0.00056166 NaN NaN NaN NaN 103.51 0.68011 103.51 103.18 103.86 0 0 0 0 0.0020261 1 63714 71.349 49.263 1 NaN NaN 0 16084000 0 16084000 28248 122 10693 10984 44197 44197 PYVPLLEAEEVR 12 0 1 Unmodified _PYVPLLEAEEVR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.8825 2 707.882467 1413.75038 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.64 1 102.64 102.14 103.14 0 0 0 0 0.00083818 1 64811 75.294 59.329 1 28249 122 10693 10984 44198 44198 PYVPLLEAEEVR 12 0 1 Unmodified _PYVPLLEAEEVR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.3882 2 707.882467 1413.75038 NaN NaN NaN -0.01482 -1.0491E-05 NaN NaN NaN NaN 115.34 0.82541 115.34 114.95 115.78 0 0 0 0 0.040309 1 67535 43.77 35.883 1 NaN NaN 0 2001800 0 2001800 28250 122 10693 10984 44199 44199 PYVPLLEAEEVR 12 0 1 Unmodified _PYVPLLEAEEVR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.3898 2 707.882467 1413.75038 NaN NaN NaN 0.083242 5.8925E-05 NaN NaN NaN NaN 115.19 0.86183 115.19 114.54 115.41 0 0 0 0 0.040309 1 66462 43.77 34.083 1 NaN NaN 0 2285600 0 2285600 28251 122 10693 10984 44200 44200 QAANFTAGGQPR 12 0 1 Unmodified _QAANFTAGGQPR_ 0 0 0 Q6RFH5;B4E018;F5GYL6 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.3091 2 609.304718 1216.59488 77531.18 0.35705 0.00021755 0.752 0.0004582 1.1091 0.00067575 609.306078257692 614.308987827425 25.749 0.95521 25.749 25.236 26.191 -1.9073E-06 125 36 6 0 0 0 5.6214E-08 2 11294 112.75 105.63 1 1.007 1.0355 0 25165000 14332000 10833000 28252 1859 10694 10985 44201;44202 44201 QAANFTAGGQPR 12 0 1 Unmodified _QAANFTAGGQPR_ 0 0 0 Q6RFH5;B4E018;F5GYL6 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.3093 2 609.304718 1216.59488 76846.48 0.31939 0.00019461 0.32826 0.00020001 0.64765 0.00039462 609.304977321569 614.308986924811 28.633 0.74107 28.633 28.338 29.079 -1.9073E-06 214 46 6 0 0 0 0.00013626 3 11472 93.667 93.667 1 1.1093 0.95465 0 7137200 2970100 4167100 28253 1859 10694 10985 44203;44204;44205 44203 QAANFTAGGQPR 12 0 1 Unmodified _QAANFTAGGQPR_ 0 0 0 Q6RFH5;B4E018;F5GYL6 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.3049 2 609.304718 1216.59488 77360.4 0.11358 6.9207E-05 1.1369 0.00069271 1.2505 0.00076192 609.304952857842 614.309063055891 28.935 0.52973 28.935 28.76 29.29 0 170 32 8 0 0 0 0.000202 3 11113 79.16 79.16 1 1.1529 0.94182 0 9262500 4314700 4947900 28254 1859 10694 10985 44206;44207;44208 44208 QAASGLVGQENAR 13 0 1 Unmodified _QAASGLVGQENAR_ 0 0 0 B5BUB1;Q9Y265 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8401 2 650.83384 1299.65313 73743.26 0.49193 0.00032016 -0.12954 -8.4309E-05 0.36239 0.00023585 650.833910251867 655.837191036702 27.015 0.46558 27.015 26.851 27.317 -1.9073E-06 89 24 6 0 0 0 1.4178E-23 1 12278 155.33 149.84 1 0.80611 0.81753 0 28058000 14882000 13176000 28255 1076 10695 10986 44209 44209 QAASGLVGQENAR 13 0 1 Unmodified _QAASGLVGQENAR_ 0 0 0 B5BUB1;Q9Y265 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.8386 2 650.83384 1299.65313 75287.54 0.80167 0.00052176 -0.089809 -5.8451E-05 0.71186 0.00046331 650.833668320522 655.83720401199 26.679 0.47111 26.679 26.433 26.905 0 92 23 7 0 0 0 2.0572E-23 2 12021 151.79 147 1 1.1567 1.2632 0 38439000 20850000 17589000 28256 1076 10695 10986 44210;44211 44210 QAASGLVGQENAR 13 0 1 Unmodified _QAASGLVGQENAR_ 0 0 0 B5BUB1;Q9Y265 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.8378 2 650.83384 1299.65313 74410.03 0.57315 0.00037302 -0.036899 -2.4015E-05 0.53625 0.00034901 650.83382313956 655.837818928088 30.575 0.51045 30.575 30.319 30.829 0 184 34 8 0 0 0 0.0018318 2 12614 56.225 56.225 1 1.1505 0.95891 0 10618000 5278100 5339700 28257 1076 10695 10986 44212;44213 44213 QAASGLVGQENAR 13 0 1 Unmodified _QAASGLVGQENAR_ 0 0 0 B5BUB1;Q9Y265 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.834 2 650.83384 1299.65313 74515.38 0.40652 0.00026457 0.25894 0.00016853 0.66546 0.0004331 650.833964758682 655.838114065133 30.735 0.4785 30.735 30.472 30.951 1.9073E-06 154 25 8 0 0 0 0.011999 2 12216 39.917 39.917 1 1.1724 0.96723 0 8268100 3659200 4608900 28258 1076 10695 10986 44214;44215 44215 QAASSLQQASLK 12 1 0 Unmodified _QAASSLQQASLK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z4T3;A1XP52 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.3434 2 616.335684 1230.65681 78573.5 0.23465 0.00014462 0.28139 0.00017343 0.51605 0.00031806 616.335652029881 620.342786372599 39.222 0.44393 39.222 38.987 39.431 0 175 38 6 0 0 0 0.0035645 2 17864 55.721 55.721 1 1.4901 1.1776 0 5180100 2033900 3146200 28259 1092 10696 10987 44216;44217 44217 QAASSLQQASLK 12 1 0 Unmodified _QAASSLQQASLK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z4T3;A1XP52 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.343 2 616.335684 1230.65681 79450.37 0.23453 0.00014455 0.14493 8.9327E-05 0.37947 0.00023388 616.335524195981 620.342763906075 39.339 0.52894 39.339 39.063 39.592 0 167 38 6 0 0 0 0.0019484 2 17440 59.84 59.84 1 1.378 1.1202 0 4493700 1703200 2790500 28260 1092 10696 10987 44218;44219 44219 QACEDHVQAQILPFREDSLDSVLFLK 26 1 1 Unmodified _QACEDHVQAQILPFREDSLDSVLFLK_ 0 0 1 Q13619;A0A0A0MR50;B2RBV7;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 770.1464 4 765.388019 3057.52297 68870.25 1.3199 0.0010102 -0.41427 -0.00031708 0.90562 0.00069315 765.639505597044 770.143545811439 132.33 0.38414 132.33 132.14 132.52 0 43 15 5 0 0 0 0.0031702 1 79530 23.44 23.44 1 0.66353 0.55904 0 4058500 2046800 2011700 28261 1718 10697 10988 44220 44220 QADIMLPALR 10 0 1 Oxidation (M) _QADIM(ox)LPALR_ QADIM(1)LPALR QADIM(40.88)LPALR 0 1 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.3188 2 572.313166 1142.61178 NaN NaN NaN 1.7369 0.00099404 NaN NaN NaN NaN 88.955 0.20273 88.955 88.83 89.033 0 0 0 0 0.025177 1 53633 40.882 24.106 1 NaN NaN 0 5871200 0 5871200 28262 397;1622 10698 10989 44221 44221 289 QADIMLPALR 10 0 1 Oxidation (M) _QADIM(ox)LPALR_ QADIM(1)LPALR QADIM(46.39)LPALR 0 1 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3196 2 572.313166 1142.61178 NaN NaN NaN 0.14136 8.09E-05 NaN NaN NaN NaN 87.819 0.19135 87.819 87.713 87.904 0 0 0 0 0.01603 1 54139 46.39 35.321 1 NaN NaN 0 7274400 0 7274400 28263 397;1622 10698 10989 44222 44222 289 QADSVEQAVYYCK 13 1 0 Unmodified _QADSVEQAVYYCK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.8615 2 780.85358 1559.69261 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.91 1 54.91 54.41 55.41 -3.8147E-06 0 0 0 0.052928 1 30883 41.08 32.126 1 28264 878 10699 10990 44223 44223 QADSVEQAVYYCK 13 1 0 Unmodified _QADSVEQAVYYCK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.8548 2 780.85358 1559.69261 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.283 1 54.283 53.783 54.783 -3.8147E-06 0 0 0 0.012493 1 31017 67.334 60.446 1 28265 878 10699 10990 44224 44224 QADSVEQAVYYCK 13 1 0 Unmodified _QADSVEQAVYYCK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.8605 2 780.85358 1559.69261 68335.19 0.57704 0.00045058 -0.13284 -0.00010373 0.4442 0.00034685 780.853239645895 784.860354106955 64.542 0.49055 64.542 64.333 64.824 7.6294E-06 166 32 7 0 0 0 0.028608 1 33189 33.89 33.89 1 1.6229 1.26 0 3452300 1514700 1937600 28266 878 10699 10990 44225 44225 QADVNLVNAK 10 1 0 Unmodified _QADVNLVNAK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.3008 2 536.293288 1070.57202 NaN NaN NaN -0.055528 -2.9779E-05 NaN NaN NaN NaN 38.743 0.62244 38.743 38.546 39.169 0 0 0 0 0.00024273 1 19915 92.491 75.82 1 NaN NaN 0 15388000 0 15388000 28267 1382 10700 10991 44226 44226 QAELVPATVNDYR 13 0 1 Unmodified _QAELVPATVNDYR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3778 2 738.37808 1474.74161 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.625 1 72.625 72.125 73.125 0 0 0 0 1.3544E-06 1 43583 103.08 82.306 1 28268 1412 10701 10992 44227 44227 QAELVPATVNDYR 13 0 1 Unmodified _QAELVPATVNDYR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.8806 2 738.37808 1474.74161 69603.57 0.79164 0.00058453 -0.2508 -0.00018518 0.54084 0.00039935 738.378156916602 743.382065111914 84.633 0.58092 84.633 84.354 84.935 0 148 40 5 0 0 0 0.0001891 1 45388 71.03 62.132 1 1.7668 1.5336 0 4307300 1486400 2820900 28269 1412 10701 10992 44228 44228 QAEMEGAVQSIQGELSK 17 1 0 Oxidation (M) _QAEM(ox)EGAVQSIQGELSK_ QAEM(1)EGAVQSIQGELSK QAEM(57.41)EGAVQSIQGELSK 0 1 0 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 914.9438 2 910.938373 1819.86219 65356.26 0.54383 0.0004954 -0.22825 -0.00020792 0.31558 0.00028748 910.938569453678 914.945316277553 70.497 0.57046 70.497 70.196 70.766 0 121 47 4 0 0 0 6.0716E-05 1 40898 57.414 54.126 1 0.87774 0.93187 0 16115000 5787800 10327000 28270 1017 10702 10993 44229 44229 803 QAEMEGAVQSIQGELSK 17 1 0 Oxidation (M) _QAEM(ox)EGAVQSIQGELSK_ QAEM(1)EGAVQSIQGELSK QAEM(71.88)EGAVQSIQGELSK 0 1 0 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 910.94 2 910.938373 1819.86219 65295.83 0.41384 0.00037698 -0.39096 -0.00035614 0.022881 2.0843E-05 910.939024553942 915.445365615033 69.424 0.50434 69.424 69.125 69.629 0 175 41 6 0 0 0 3.2941E-05 3 41259 71.879 71.879 1 1.1646 1.1858 0 12378000 4726600 7651200 28271 1017 10702 10993 44230;44231;44232 44230 803 QAEQLSAAGEGGDAGR 16 0 1 Unmodified _QAEQLSAAGEGGDAGR_ 0 0 0 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.3522 2 758.852958 1515.69136 NaN NaN NaN -4.1584 -0.0031556 NaN NaN NaN NaN 24.649 0.32309 24.649 24.508 24.831 0 0 0 0 5.1167E-26 2 10401 136.38 119.16 1 NaN NaN 0 8166300 0 8166300 28272 858 10703 10994 44233;44234 44234 QAEQLSAAGEGGDAGR 16 0 1 Unmodified _QAEQLSAAGEGGDAGR_ 0 0 0 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.8532 2 758.852958 1515.69136 NaN NaN NaN 0.44382 0.0003368 NaN NaN NaN NaN 24.747 0.26435 24.747 24.566 24.831 0 0 0 0 3.0072E-09 1 10423 103.88 97.497 1 NaN NaN 0 4868300 4868300 0 28273 858 10703 10994 44235 44235 QAEQLSAAGEGGDAGR 16 0 1 Unmodified _QAEQLSAAGEGGDAGR_ 0 0 0 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.8568 2 758.852958 1515.69136 71289.49 0.41796 0.00031717 0.12677 9.62E-05 0.54473 0.00041337 758.8527328525 763.857327413729 24.523 0.31427 24.523 24.36 24.675 0 69 15 7 0 0 0 1.2316E-17 2 10206 132.14 129.8 1 1.0237 1.0132 0 15420000 6857100 8562400 28274 858 10703 10994 44236;44237 44237 QAEQLSAAGEGGDAGR 16 0 1 Unmodified _QAEQLSAAGEGGDAGR_ 0 0 0 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 759.3552 2 758.852958 1515.69136 70141.59 0.61266 0.00046492 0.70658 0.00053619 1.3192 0.0010011 758.853026312142 763.857267567138 27.832 0.89103 27.832 27.397 28.288 1.9073E-06 148 38 9 0 0 0 0.00011143 2 10906 78.529 76.942 1 1.1764 1.012 0 6935600 3277600 3658000 28275 858 10703 10994 44238;44239 44239 QAEQLSAAGEGGDAGR 16 0 1 Unmodified _QAEQLSAAGEGGDAGR_ 0 0 0 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 758.8531 2 758.852958 1515.69136 69472.05 0.31542 0.00023936 0.69437 0.00052692 1.0098 0.00076628 758.853057330939 763.857270927559 28.067 0.52827 28.067 27.863 28.391 0 136 24 8 0 0 0 1.8782E-07 1 10535 99.531 99.531 1 1.2613 1.0465 0 5568600 2584000 2984600 28276 858 10703 10994 44240 44240 QAEQLVFPLEK 11 1 0 Unmodified _QAEQLVFPLEK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.366 2 651.358628 1300.7027 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.306 1 94.306 93.806 94.806 0 0 0 0 0.030034 1 57277 48.981 30.201 1 28277 2008 10704 10995 44241 44241 QAEQLVFPLEK 11 1 0 Unmodified _QAEQLVFPLEK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3614 2 651.358628 1300.7027 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.393 1 94.393 93.893 94.893 0 0 0 0 0.010105 1 57337 59.013 45.66 1 28278 2008 10704 10995 44242 44242 QAEQLVFPLEK 11 1 0 Unmodified _QAEQLVFPLEK_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.8675 2 651.358628 1300.7027 75718.89 0.86655 0.00056443 0.43364 0.00028246 1.3002 0.00084689 651.358992058031 655.365797864473 107.78 0.90282 107.78 107.51 108.42 7.6294E-06 230 47 7 0 0 0 0.022516 1 61688 42.718 42.718 1 1.4963 1.1883 0 10111000 3842600 6268600 28279 2008 10704 10995 44243 44243 QAEVANQETKEDLPAENGETK 21 2 0 Unmodified _QAEVANQETKEDLPAENGETK_ 0 0 1 A6NL93;Q6NSG7;Q3B790;A6NEL0;P05114 A6NL93 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 768.0332 3 767.699547 2300.07681 68760.07 0.56825 0.00043625 -0.096004 -7.3702E-05 0.47225 0.00036255 768.033760784212 773.042214771965 37.613 0.4497 37.613 37.384 37.833 0 225 32 11 0 0 0 0.0025155 1 16896 26.005 23.123 1 0.42791 0.36509 0 17618000 12413000 5205200 28280 679 10705 10996 44244 44244 QAEVANQETKEDLPAENGETK 21 2 0 Unmodified _QAEVANQETKEDLPAENGETK_ 0 0 1 A6NL93;Q6NSG7;Q3B790;A6NEL0;P05114 A6NL93 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 767.7 3 767.699547 2300.07681 69109.21 0.51904 0.00039847 -0.050783 -3.8986E-05 0.46826 0.00035948 768.033746044229 773.042367817547 37.816 0.59634 37.816 37.596 38.192 0 324 49 11 0 0 0 0.0014658 2 16549 30.652 26.919 1 0.43305 0.36631 0 13213000 9050400 4162300 28281 679 10705 10996 44245;44246 44245 QAFAPFCAEDYTESLLQLHDAEIVR 25 0 1 Unmodified _QAFAPFCAEDYTESLLQLHDAEIVR_ 0 0 0 A0A024RC67;O43663;H0YL53 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 975.8038 3 975.135879 2922.38581 59894.74 0.36837 0.00035921 2.0168 0.0019666 2.3852 0.0023259 975.806557010339 979.140838104274 134.37 0.27039 134.37 134.17 134.44 0 43 12 8 0 0 0 0.01661 1 81142 19.403 17.237 1 0.6479 0.54722 0 17932000 10142000 7789700 28282 353 10706 10997 44247 44247 QAFYFALR 8 0 1 Unmodified _QAFYFALR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 508.272 2 508.271627 1014.5287 84397.65 0.61644 0.00031332 0.12946 6.5798E-05 0.74589 0.00037912 508.271622531447 513.275758613908 108.6 1.1746 108.6 108.23 109.41 0 260 56 8 0 0 0 0.026106 1 62421 54.774 45.828 1 1.8155 1.5222 0 25515000 8323600 17192000 28283 2070 10707 10998 44248 44248 QAFYFALR 8 0 1 Unmodified _QAFYFALR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 508.2719 2 508.271627 1014.5287 84744.89 0.43213 0.00021964 0.12653 6.4313E-05 0.55866 0.00028395 508.271619443615 513.275750344699 108.47 1.1048 108.47 108.06 109.16 0 252 54 8 0 0 0 0.01197 1 61379 68.7 60.282 1 1.7548 1.5304 0 25353000 8647700 16705000 28284 2070 10707 10998 44249 44249 QAGAEALSQAVAR 13 0 1 Unmodified _QAGAEALSQAVAR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3391 2 636.338758 1270.66296 NaN NaN NaN 0.15318 9.7474E-05 NaN NaN NaN NaN 48.022 0.3094 48.022 47.905 48.215 0 0 0 0 0.004753 1 26803 60.255 41.815 1 NaN NaN 0 5202800 5202800 0 28285 1205 10708 10999 44250 44250 QAGEVTYADAHK 12 1 0 Unmodified _QAGEVTYADAHK_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5;V9HVZ0;A8K588;Q13247;Q59GY3 A8K644;V9HVZ0 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3096 2 645.309666 1288.60478 74818.21 0.53107 0.0003427 0.08081 5.2147E-05 0.61188 0.00039485 645.309650314954 649.316723261612 19.099 0.40985 19.099 18.892 19.302 0 122 26 7 0 0 0 1.3787E-05 1 5801 106.29 106.29 1 1.3522 1.4579 0 37603000 14253000 23349000 28286 748;755 10709 11000 44251 44251 QAGEVTYADAHK 12 1 0 Unmodified _QAGEVTYADAHK_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5;V9HVZ0;A8K588;Q13247;Q59GY3 A8K644;V9HVZ0 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.3118 2 645.309666 1288.60478 74671.98 0.51779 0.00033413 0.10301 6.6474E-05 0.6208 0.00040061 645.309780946207 649.316857887486 19.124 0.42953 19.124 18.795 19.225 0 54 24 8 0 0 0 8.5121E-13 1 5569 132.32 124.84 1 1.2745 1.421 0 52012000 21963000 30049000 28287 748;755 10709 11000 44252 44252 QAGEVTYADAHK 12 1 0 Unmodified _QAGEVTYADAHK_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5;V9HVZ0;A8K588;Q13247;Q59GY3 A8K644;V9HVZ0 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.8121 2 645.309666 1288.60478 74742.96 0.15887 0.00010252 0.61228 0.00039511 0.77114 0.00049763 645.310140046301 649.317045301776 20.324 0.35727 20.324 20.085 20.442 0 42 6 8 0 0 0 3.6003E-29 2 5768 165.18 148.97 1 0.83327 0.65525 0 11144000 6190600 4953500 28288 748;755 10709 11000 44253;44254 44253 QAGEVTYADAHK 12 1 0 Unmodified _QAGEVTYADAHK_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5;V9HVZ0;A8K588;Q13247;Q59GY3 A8K644;V9HVZ0 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 433.2135 3 430.542203 1288.60478 89944.97 -0.6657 -0.00028661 0.76737 0.00033038 0.10167 4.3772E-05 430.542476133649 433.21388215971 20.322 0.24003 20.322 20.202 20.442 0 40 6 9 0 0 0 0.031055 1 5783 18.829 15.962 1 0.88461 0.70577 0 9429500 5141800 4287800 28289 748;755 10709 11000 44255 44255 QAGEVTYADAHK 12 1 0 Unmodified _QAGEVTYADAHK_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5;V9HVZ0;A8K588;Q13247;Q59GY3 A8K644;V9HVZ0 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.3099 2 645.309666 1288.60478 74574.1 0.11906 7.6831E-05 0.17994 0.00011612 0.299 0.00019295 645.309753540834 649.316865574014 20.301 0.30411 20.301 20.152 20.457 0 64 11 8 0 0 0 1.7005E-12 2 5259 126.71 117.84 1 0.91699 0.75377 0 9812800 5108900 4704000 28290 748;755 10709 11000 44256;44257 44257 QAGEVTYADAHK 12 1 0 Unmodified _QAGEVTYADAHK_ 0 0 0 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5;V9HVZ0;A8K588;Q13247;Q59GY3 A8K644;V9HVZ0 V9HVZ0 SFRS4;SRSF4;HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 433.2135 3 430.542203 1288.60478 91364.08 -0.73415 -0.00031608 0.41848 0.00018017 -0.31567 -0.00013591 430.542342068925 433.213727744356 20.304 0.2517 20.304 20.181 20.433 0 52 9 7 0 0 0 0.031327 1 5260 16.026 15.395 1 0.80028 0.65103 0 7085500 3805400 3280100 28291 748;755 10709 11000 44258 44258 QAHLTNQYMQR 11 0 1 Oxidation (M) _QAHLTNQYM(ox)QR_ QAHLTNQYM(1)QR QAHLTNQYM(53.43)QR 0 1 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;H0YB86 A0A087WTT1 A0A087WTT1 PABPC1 Polyadenylate-binding protein;Polyadenylate-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.562 3 469.22622 1404.65683 88275.91 0.016411 7.7003E-06 -0.34662 -0.00016264 -0.33021 -0.00015494 469.56060939491 472.562198319431 18.325 0.186 18.325 18.249 18.435 0 19 5 6 0 0 0 0.0017682 1 5040 53.432 50.39 1 2.2352 2.2374 0 6859100 2375100 4484000 28292 273 10710 11001 44259 44259 209 QAIPIGLQNR 10 0 1 Unmodified _QAIPIGLQNR_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56;H0YI52 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.3256 2 555.324922 1108.63529 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.855 1 64.855 64.355 65.355 0 0 0 0 0.015402 1 38212 55.531 21.734 1 28293 63 10711 11002 44260 44260 QALEEAATADLDITEINK 18 1 0 Unmodified _QALEEAATADLDITEINK_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 973.4929 2 972.991659 1943.96877 61183.99 0.29854 0.00029047 0.56615 0.00055086 0.86468 0.00084133 972.992983937745 976.998880763262 102.37 0.55193 102.37 102.15 102.7 7.6294E-06 262 45 7 0 0 0 1.8429E-30 4 62956 148.41 148.41 1 1.0419 1.1226 0 33772000 17756000 16016000 28294 1789 10712 11003 44261;44262;44263;44264 44263 QALEEAATADLDITEINK 18 1 0 Unmodified _QALEEAATADLDITEINK_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 973.9946 2 972.991659 1943.96877 60898.78 0.062942 6.1242E-05 0.37279 0.00036272 0.43574 0.00042397 973.494369747158 976.998199201942 101.86 0.57352 101.86 101.52 102.09 0 265 43 8 0 0 0 4.368E-22 3 64073 126.1 126.1 1 1.1448 1.2921 0 65558000 29564000 35994000 28295 1789 10712 11003 44265;44266;44267 44267 QALEEAATADLDITEINK 18 1 0 Unmodified _QALEEAATADLDITEINK_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 973.4946 2 972.991659 1943.96877 61139.85 0.29994 0.00029184 0.52353 0.00050939 0.82347 0.00080123 973.493913897885 976.999191500452 114.65 0.73876 114.65 114.28 115.02 0 193 30 10 0 0 0 8.5466E-93 2 66985 209.39 197.12 1 1.5179 1.2349 0 30314000 12428000 17886000 28296 1789 10712 11003 44268;44269 44269 QALEEAATADLDITEINK 18 1 0 Unmodified _QALEEAATADLDITEINK_ 0 0 0 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 973.4937 2 972.991659 1943.96877 61062.02 0.22896 0.00022278 0.31942 0.0003108 0.54839 0.00053358 973.49356804503 976.998967617798 114.59 0.91049 114.59 114.33 115.24 0 228 41 9 0 0 0 5.9214E-140 2 66054 241.42 241.42 1 1.4652 1.2091 0 30619000 11622000 18997000 28297 1789 10712 11003 44270;44271 44271 QALLAELEEQK 11 1 0 Unmodified _QALLAELEEQK_ 0 0 0 A8K1M4;Q9H081 A8K1M4 A8K1M4 MIS12 Protein MIS12 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3547 2 636.345717 1270.67688 77512.08 0.60296 0.00038369 0.27597 0.00017561 0.87893 0.0005593 636.345358812746 640.352983375939 98.619 0.4198 98.619 98.419 98.839 0 95 27 7 0 0 0 0.025327 1 55649 41.283 41.283 1 0.84435 0.6584 0 3298200 1761400 1536800 28298 704 10713 11004 44272 44272 QALQSLTELLMAQPR 15 0 1 Oxidation (M) _QALQSLTELLM(ox)AQPR_ QALQSLTELLM(1)AQPR QALQSLTELLM(67.02)AQPR 0 1 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 858.4662 2 857.961454 1713.90835 65529.83 0.75328 0.00064629 -1.5906 -0.0013646 -0.83727 -0.00071834 857.957470825461 863.466666179888 117.87 0.53763 117.87 117.68 118.22 0 71 31 5 0 0 0 0.00010761 2 75535 67.385 67.022 1 1.0393 1.0317 0 8361100 4200800 4160300 28299 1565 10714 11005 44273;44274 44274 1322 QALQSLTELLMAQPR 15 0 1 Oxidation (M) _QALQSLTELLM(ox)AQPR_ QALQSLTELLM(1)AQPR QALQSLTELLM(93.26)AQPR 0 1 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 863.4652 2 857.961454 1713.90835 65011.33 0.59565 0.00051105 -0.34984 -0.00030015 0.24582 0.0002109 857.961025477687 863.46614521413 117.37 0.33842 117.37 117.18 117.51 0 73 19 5 0 0 0 4.6756E-06 1 76887 93.258 79.1 1 1.0543 1.0636 0 10423000 5622100 4801100 28300 1565 10714 11005 44275 44275 1322 QALSTATATVSVGK 14 1 0 Unmodified _QALSTATATVSVGK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3759 2 667.369724 1332.72489 NaN NaN NaN -0.25618 -0.00017097 NaN NaN NaN NaN 53.016 0.3616 53.016 52.76 53.122 3.8147E-06 0 0 0 0.0090957 1 29462 52.693 22.438 1 NaN NaN 0 7908100 0 7908100 28301 397;1622 10715 11006 44276 44276 QALTTCDDILIK 12 1 0 Unmodified _QALTTCDDILIK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.8667 2 695.86596 1389.71737 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.763 1 82.763 82.263 83.263 0 0 0 0 0.00089906 1 49476 74.533 52.447 1 28302 1421 10716 11007 44277 44277 QALTTCDDILIK 12 1 0 Unmodified _QALTTCDDILIK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 695.866 2 695.86596 1389.71737 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.843 1 94.843 94.343 95.343 0 0 0 0 5.0482E-07 1 53101 104.22 65.918 1 28303 1421 10716 11007 44278 44278 QALTTCDDILIK 12 1 0 Unmodified _QALTTCDDILIK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 695.8657 2 695.86596 1389.71737 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.779 1 94.779 94.279 95.279 0 0 0 0 0.0019011 1 52241 69.01 33.786 1 28304 1421 10716 11007 44279 44279 QALVGSDSAEDEK 13 1 0 Unmodified _QALVGSDSAEDEK_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.8154 2 674.814978 1347.6154 NaN NaN NaN 0.41154 0.00027771 NaN NaN NaN NaN 29.884 0.37147 29.884 29.746 30.117 0 0 0 0 0.024395 1 11795 45.653 45.653 1 NaN NaN 0 1346200 1346200 0 28305 1380 10717 11008 44280 44280 QANPSVLER 9 0 1 Unmodified _QANPSVLER_ 0 0 0 Q8NDD1;Q5TBH9 Q8NDD1 Q8NDD1 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.2729 2 507.272355 1012.53016 92691.45 0.37677 0.00019112 2.063 0.0010465 2.4398 0.0012376 507.273389760695 512.27751758993 29.605 0.21377 29.605 29.504 29.718 1.9073E-06 38 15 4 0 0 0 0.0073095 1 14379 62.104 44.864 1 1.2847 1.2998 0 17920000 7752200 10167000 28306 1925 10718 11009 44281 44281 QAPDNEITIK 10 1 0 Unmodified _QAPDNEITIK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.8047 2 564.798403 1127.58225 78556.29 0.36942 0.00020865 0.16636 9.3962E-05 0.53578 0.00030261 564.798328426318 568.805448979787 47.336 1.0083 47.336 46.989 47.997 0 469 73 10 0 0 0 0.049925 1 22815 36.24 24.604 1 1.0681 0.85686 0 21216000 9643400 11572000 28307 2079 10719 11010 44282 44282 QAPDNEITIK 10 1 0 Unmodified _QAPDNEITIK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.8055 2 564.798403 1127.58225 78763.98 0.19744 0.00011151 -0.048793 -2.7558E-05 0.14865 8.3956E-05 564.798202584531 568.805423071071 47.437 1.1452 47.437 47.048 48.193 0 419 91 9 0 0 0 0.03614 1 22311 40.331 33.74 1 1.1457 0.92032 0 13958000 6096800 7861300 28308 2079 10719 11010 44283 44283 QAPQPQSSLQR 11 0 1 Unmodified _QAPQPQSSLQR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A1B0GW07 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.3263 2 620.32565 1238.63675 77654.53 0.077944 4.8351E-05 0.52064 0.00032297 0.59859 0.00037132 620.326148950073 625.329978597145 22.965 0.33192 22.965 22.823 23.155 0 50 13 6 0 0 0 0.0055485 1 8889 56.013 37.574 1 0.48969 0.48021 0 13939000 9165400 4773400 28309 591 10720 11011 44284 44284 QAPQPQSSLQR 11 0 1 Unmodified _QAPQPQSSLQR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A1B0GW07 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.3322 2 620.32565 1238.63675 76720.99 0.54137 0.00033582 -0.080564 -4.9976E-05 0.4608 0.00028585 620.325566918119 625.329890835804 25.644 0.37949 25.644 25.463 25.843 -1.9073E-06 62 14 7 0 0 0 0.02141 1 8879 43.282 20.542 1 1.9953 1.7624 0 3671600 1227500 2444100 28310 591 10720 11011 44285 44285 QAQAAVLAVLPR 12 0 1 Unmodified _QAQAAVLAVLPR_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.8747 2 618.874779 1235.73501 77683.62 0.67337 0.00041673 0.10294 6.371E-05 0.77632 0.00048044 618.874670326084 623.878993276807 95.033 1.0001 95.033 94.62 95.62 0 414 79 7 0 0 0 7.353E-09 1 57596 153.24 149.36 1 0.94391 1.0543 0 86258000 43426000 42832000 28311 1316 10721 11012 44286 44286 QAQAAVLAVLPR 12 0 1 Unmodified _QAQAAVLAVLPR_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.8807 2 618.874779 1235.73501 77334.25 0.65173 0.00040334 0.18284 0.00011315 0.83457 0.00051649 618.874814216079 623.87896194535 94.017 1.0011 94.017 93.631 94.633 0 439 85 7 0 0 0 5.0767E-18 2 58525 172.23 172.23 1 0.92363 1.0509 0 114710000 60249000 54461000 28312 1316 10721 11012 44287;44288 44288 QAQAAVLAVLPR 12 0 1 Unmodified _QAQAAVLAVLPR_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8759 2 618.874779 1235.73501 76378.14 0.66473 0.00041138 -0.081987 -5.074E-05 0.58274 0.00036064 618.874715355737 623.878788521549 108.5 0.96124 108.5 108.09 109.05 -7.6294E-06 262 46 8 0 0 0 1.9482E-08 2 62181 145.72 143.1 1 1.0156 0.8691 0 39888000 20677000 19211000 28313 1316 10721 11012 44289;44290 44290 QAQAAVLAVLPR 12 0 1 Unmodified _QAQAAVLAVLPR_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.8787 2 618.874779 1235.73501 76731.71 0.54111 0.00033488 -0.080998 -5.0128E-05 0.46011 0.00028475 618.874662441552 623.878827801184 108.25 0.89426 108.25 107.87 108.77 0 256 45 9 0 0 0 0.00021916 2 61063 82.645 82.645 1 1.0317 0.89987 0 39502000 19483000 20019000 28314 1316 10721 11012 44291;44292 44291 QAQEYEALLNIK 12 1 0 Unmodified _QAQEYEALLNIK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3774 2 710.377549 1418.74054 73996.57 0.80651 0.00057292 -0.13264 -9.4227E-05 0.67386 0.0004787 710.377501505642 714.384554351621 94.974 0.78506 94.974 94.667 95.452 0 386 62 8 0 0 0 7.9903E-48 2 57683 188.91 141.47 1 1.137 1.286 0 103350000 51616000 51729000 + 28315 316;1155 10722 11013 44293;44294 44294 QAQEYEALLNIK 12 1 0 Unmodified _QAQEYEALLNIK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.3848 2 710.377549 1418.74054 72326.52 0.92638 0.00065808 -0.077385 -5.4973E-05 0.849 0.00060311 710.37748252776 714.384589618838 94.19 0.88799 94.19 93.813 94.701 7.6294E-06 459 73 9 0 0 0 1.2074E-05 2 58430 131.52 87.882 1 1.1284 1.2627 0 84427000 40095000 44332000 + 28316 316;1155 10722 11013 44295;44296 44295 QAQEYEALLNIK 12 1 0 Unmodified _QAQEYEALLNIK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.3777 2 710.377549 1418.74054 71613.07 0.85539 0.00060765 -0.092299 -6.5567E-05 0.76309 0.00054208 710.377472994996 714.38444032795 108.7 0.82648 108.7 108.36 109.18 7.6294E-06 220 40 9 0 0 0 1.8864E-12 2 62411 125.48 80.112 1 1.2904 1.0503 0 30961000 14063000 16898000 + 28317 316;1155 10722 11013 44297;44298 44298 QAQEYEALLNIK 12 1 0 Unmodified _QAQEYEALLNIK_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.3777 2 710.377549 1418.74054 71778.86 0.6434 0.00045706 -0.064219 -4.562E-05 0.57918 0.00041144 710.377532616608 714.38436801145 108.64 0.77219 108.64 108.25 109.02 0 247 38 9 0 0 0 1.0524E-08 2 61453 122.96 86.538 1 1.263 1.0403 0 29048000 14083000 14965000 + 28318 316;1155 10722 11013 44299;44300 44300 QAQIEVVPSASALIIK 16 1 0 Unmodified _QAQIEVVPSASALIIK_ 0 0 0 P30050;Q59FI9;D3DS95 P30050 P30050 RPL12;hCG_21173 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.9915 2 833.990537 1665.96652 66486.51 0.82614 0.00068899 -0.087472 -7.2951E-05 0.73866 0.00061604 833.990530124497 837.99752892746 112.34 0.70082 112.34 112.03 112.73 0 328 49 9 0 0 0 1.6262E-08 2 70783 103.44 103.44 1 0.97184 1.0979 0 140740000 72018000 68723000 28319 1532 10723 11014 44301;44302 44302 QAQIEVVPSASALIIK 16 1 0 Unmodified _QAQIEVVPSASALIIK_ 0 0 0 P30050;Q59FI9;D3DS95 P30050 P30050 RPL12;hCG_21173 60S ribosomal protein L12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.9904 2 833.990537 1665.96652 66853.78 1.0096 0.000842 -0.23473 -0.00019577 0.77487 0.00064624 833.990410681995 837.99739984935 111.74 0.66628 111.74 111.43 112.1 0 337 45 11 0 0 0 1.5357E-17 3 72038 130.71 130.71 1 0.97051 1.1032 0 144410000 73821000 70587000 28320 1532 10723 11014 44303;44304;44305 44305 QAQIEVVPSASALIIK 16 1 0 Unmodified _QAQIEVVPSASALIIK_ 0 0 0 P30050;Q59FI9;D3DS95 P30050 P30050 RPL12;hCG_21173 60S ribosomal protein L12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.9984 2 833.990537 1665.96652 66396.95 0.75128 0.00062656 -0.093241 -7.7762E-05 0.65803 0.00054879 833.990632480232 837.997505116365 123.68 0.95241 123.68 123.44 124.39 0 241 39 12 0 0 0 1.1923E-05 2 73943 86.772 86.772 1 1.1309 0.97206 0 86790000 41572000 45217000 28321 1532 10723 11014 44306;44307 44307 QAQIEVVPSASALIIK 16 1 0 Unmodified _QAQIEVVPSASALIIK_ 0 0 0 P30050;Q59FI9;D3DS95 P30050 P30050 RPL12;hCG_21173 60S ribosomal protein L12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 833.9915 2 833.990537 1665.96652 66895.45 0.86008 0.0007173 -0.26747 -0.00022307 0.59261 0.00049423 833.990517178531 837.997399109802 123.52 0.81646 123.52 123.24 124.05 0 224 32 11 0 0 0 2.379E-12 2 72857 120.55 120.55 1 1.1474 0.97761 0 88938000 40576000 48362000 28322 1532 10723 11014 44308;44309 44308 QAQLAQTLQQQEQASQGLR 19 0 1 Unmodified _QAQLAQTLQQQEQASQGLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1063.5509 2 1063.55107 2125.08759 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.577 1 73.577 73.077 74.077 0 0 0 0 6.0449E-15 1 43159 134.68 120.43 1 28323 186;1747;718 10724 11015 44310 44310 QAQLAQTLQQQEQASQGLR 19 0 1 Unmodified _QAQLAQTLQQQEQASQGLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1068.556 2 1063.55107 2125.08759 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.5 1 72.5 72 73 0 0 0 0 6.9656E-15 1 43518 110.44 88.679 1 28324 186;1747;718 10724 11015 44311 44311 QAQQERDELADEIANSSGK 19 1 1 Unmodified _QAQQERDELADEIANSSGK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.0053 3 696.997928 2087.97195 72680.41 0.63808 0.00044474 -0.21331 -0.00014867 0.42477 0.00029606 696.997574521672 703.005348687863 49.034 0.70929 49.034 48.648 49.357 0 230 53 7 0 0 0 1.5635E-05 2 26728 54.103 50.609 1 1.9037 2.1534 0 23287000 10436000 12851000 28325 81 10725 11016 44312;44313 44312 QAQQERDELADEIANSSGK 19 1 1 Unmodified _QAQQERDELADEIANSSGK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.0057 3 696.997928 2087.97195 73163.72 0.50809 0.00035414 -0.24172 -0.00016848 0.26637 0.00018566 697.331699845564 703.005298060535 47.643 0.65002 47.643 47.269 47.919 0 176 44 6 0 0 0 7.8857E-07 3 26442 85.087 85.087 1 1.6404 1.8891 0 27652000 13168000 14484000 28326 81 10725 11016 44314;44315;44316 44314 QAQQERDELADEIANSSGK 19 1 1 Unmodified _QAQQERDELADEIANSSGK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 703.007 3 696.997928 2087.97195 72077.91 0.62886 0.00043831 0.26395 0.00018397 0.89281 0.00062229 696.998155616178 703.339802544241 57.398 0.54319 57.398 57.131 57.674 -3.8147E-06 202 38 9 0 0 0 0.057062 1 28968 15.241 15.241 1 2.6739 2.2315 0 6351200 1498800 4852400 28327 81 10725 11016 44317 44317 QAQQERDELADEIANSSGK 19 1 1 Unmodified _QAQQERDELADEIANSSGK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.0055 3 696.997928 2087.97195 72714.03 0.54017 0.0003765 0.29037 0.00020239 0.83054 0.00057888 697.332956865272 703.005514765458 57.9 0.5704 57.9 57.676 58.247 0 212 41 8 0 0 0 0.024949 1 28668 20.864 20.864 1 3.0765 2.5761 0 5802700 1481600 4321100 28328 81 10725 11016 44318 44318 QAQREDALELTEK 13 1 1 Unmodified _QAQREDALELTEK_ 0 0 1 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.9377 3 510.930126 1529.76855 83756.27 0.028324 1.4471E-05 0.076439 3.9055E-05 0.10476 5.3526E-05 510.930070512486 516.937684692013 42.609 0.60594 42.609 42.319 42.925 3.8147E-06 164 36 7 0 0 0 0.013486 2 19384 28.779 28.779 1 1.472 1.2325 0 5670400 2233600 3436800 28329 790 10726 11017 44319;44320 44319 QASIIEYLPTLR 12 0 1 Unmodified _QASIIEYLPTLR_ 0 0 0 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.905 2 702.398284 1402.78202 75021.3 0.95838 0.00067317 -0.22249 -0.00015628 0.73589 0.00051689 702.398401376241 707.402079391277 128.95 0.37592 128.95 128.76 129.14 -1.5259E-05 49 17 4 0 0 0 0.021483 1 77967 38.634 38.634 1 3.5652 3.1286 0 1722500 308710 1413800 28330 1984 10727 11018 44321 44321 QASIIEYLPTLR 12 0 1 Unmodified _QASIIEYLPTLR_ 0 0 0 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 707.4033 2 702.398284 1402.78202 NaN NaN NaN -0.12544 -8.8108E-05 NaN NaN NaN NaN 128.77 0.43211 128.77 128.57 129 0 0 0 0 0.011177 1 76852 54.471 37.035 1 NaN NaN 0 1799800 0 1799800 28331 1984 10727 11018 44322 44322 QASQGMVGQLAAR 13 0 1 Oxidation (M) _QASQGM(ox)VGQLAAR_ QASQGM(1)VGQLAAR QASQGM(98.05)VGQLAAR 0 1 0 Q9Y230;B4DW30;X6R2L4 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.8372 2 666.838068 1331.66158 NaN NaN NaN -0.24677 -0.00016456 NaN NaN NaN NaN 28.797 0.19769 28.797 28.669 28.866 0 0 0 0 3.2518E-06 1 13733 98.048 72.662 1 NaN NaN 0 5281500 5281500 0 28332 2120 10728 11019 44323 44323 1946 QASQGMVGQLAAR 13 0 1 Oxidation (M) _QASQGM(ox)VGQLAAR_ QASQGM(1)VGQLAAR QASQGM(93.32)VGQLAAR 0 1 0 Q9Y230;B4DW30;X6R2L4 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.8423 2 666.838068 1331.66158 74613.89 0.57252 0.00038178 0.36287 0.00024197 0.93539 0.00062375 666.838719496651 672.343705205482 28.188 0.47413 28.188 27.871 28.345 0 54 24 4 0 0 0 4.4099E-05 1 13335 93.325 88.419 1 0.95221 0.95398 0 18479000 10072000 8406900 28333 2120 10728 11019 44324 44324 1946 QASQGMVGQLAAR 13 0 1 Oxidation (M) _QASQGM(ox)VGQLAAR_ QASQGM(1)VGQLAAR QASQGM(51.44)VGQLAAR 0 1 0 Q9Y230;B4DW30;X6R2L4 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.8392 2 666.838068 1331.66158 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.269 1 28.269 27.769 28.769 1.9073E-06 0 0 0 0.006513 1 13468 51.436 28.082 1 28334 2120 10728 11019 44325 44325 1946 QATTIIADNIIFLSDQTK 18 1 0 Unmodified _QATTIIADNIIFLSDQTK_ 0 0 0 Q567R6;A4D1U3;Q04837 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 997.0372 2 996.536037 1991.05752 62020.89 0.60532 0.00060322 0.18369 0.00018305 0.789 0.00078627 997.037633438006 1000.54286336555 121.33 0.3797 121.33 121.12 121.5 -7.6294E-06 105 23 6 0 0 0 1.005E-07 1 78303 89.629 89.629 1 0.85622 0.86899 0 13516000 7826600 5689400 28335 666 10729 11020 44326 44326 QATTIIADNIIFLSDQTK 18 1 0 Unmodified _QATTIIADNIIFLSDQTK_ 0 0 0 Q567R6;A4D1U3;Q04837 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1000.5422 2 996.536037 1991.05752 NaN NaN NaN 0.26236 0.00026145 NaN NaN NaN NaN 120.86 0.39345 120.86 120.67 121.07 0 0 0 0 0.00043139 1 79854 60.345 45.784 1 NaN NaN 0 7809900 0 7809900 28336 666 10729 11020 44327 44327 QATTIIADNIIFLSDQTK 18 1 0 Unmodified _QATTIIADNIIFLSDQTK_ 0 0 0 Q567R6;A4D1U3;Q04837 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1000.5447 2 996.536037 1991.05752 61671.63 0.60447 0.00060238 0.014993 1.4941E-05 0.61946 0.00061732 997.037534028484 1000.54310503622 133.98 0.37492 133.98 133.77 134.14 -1.5259E-05 78 15 9 0 0 0 0.020628 1 81704 23.934 23.934 1 0.7871 0.62546 0 10052000 5756000 4296500 28337 666 10729 11020 44328 44328 QAVDSPAASFCR 12 0 1 Unmodified _QAVDSPAASFCR_ 0 0 0 Q9H6R4;B4DF80;B3KPN5;A0A0C4DFX0 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.808 2 654.803694 1307.59283 75940.78 0.62488 0.00040917 0.49606 0.00032482 1.1209 0.00073399 654.80390780136 659.807998149324 46.168 0.37959 46.168 45.99 46.369 -3.8147E-06 80 28 4 0 0 0 0.00035606 1 25355 72.2 61.049 1 1.2143 1.2139 0 16926000 6197200 10729000 28338 2038 10730 11021 44329 44329 QAVDSPAASFCR 12 0 1 Unmodified _QAVDSPAASFCR_ 0 0 0 Q9H6R4;B4DF80;B3KPN5;A0A0C4DFX0 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 654.8042 2 654.803694 1307.59283 74728.27 0.7608 0.00049818 0.27546 0.00018037 1.0363 0.00067855 654.803683270956 659.807932988914 54.262 0.78715 54.262 54.003 54.79 0 225 51 6 0 0 0 0.0024232 2 27028 58.63 58.63 1 1.625 1.3818 0 5328700 1904300 3424400 28339 2038 10730 11021 44330;44331 44331 QAVDSPAASFCR 12 0 1 Unmodified _QAVDSPAASFCR_ 0 0 0 Q9H6R4;B4DF80;B3KPN5;A0A0C4DFX0 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.8045 2 654.803694 1307.59283 74050.38 0.49825 0.00032626 0.46822 0.00030659 0.96647 0.00063284 654.803857292259 659.808137697929 54.794 0.75594 54.794 54.488 55.244 0 234 55 6 0 0 0 0.0083323 1 26742 47.894 44.915 1 1.5824 1.3362 0 4734400 2022000 2712400 28340 2038 10730 11021 44332 44332 QAVDVSPLR 9 0 1 Unmodified _QAVDVSPLR_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.7814 2 492.777274 983.539994 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.348 1 50.348 49.848 50.848 -3.8147E-06 0 0 0 0.0052878 1 27787 68.224 32.343 1 28341 160 10731 11022 44333 44333 QAVDVSPLR 9 0 1 Unmodified _QAVDVSPLR_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.7813 2 492.777274 983.539994 86792.55 0.098111 4.8347E-05 0.21399 0.00010545 0.3121 0.00015379 492.777165057935 497.781455290448 49.152 0.79256 49.152 48.734 49.526 0 276 67 8 0 0 0 0.0018198 2 27584 80.438 53.476 1 1.1035 1.2547 0 120830000 57641000 63187000 28342 160 10731 11022 44334;44335 44335 QAVDVSPLR 9 0 1 Unmodified _QAVDVSPLR_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.7816 2 492.777274 983.539994 85995.7 0.30747 0.00015151 0.41146 0.00020276 0.71892 0.00035427 492.777093109982 497.781343930195 57.576 0.58409 57.576 57.325 57.909 -3.8147E-06 166 42 6 0 0 0 0.04152 1 29128 41.427 30.959 1 0.96896 0.83408 0 7436500 3582000 3854600 28343 160 10731 11022 44336 44336 QAVDVSPLR 9 0 1 Unmodified _QAVDVSPLR_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.7815 2 492.777274 983.539994 86576.16 0.18184 8.9609E-05 0.31172 0.00015361 0.49357 0.00024322 492.777131326719 497.781386103213 57.954 0.68563 57.954 57.676 58.362 0 200 50 6 0 0 0 0.033291 1 28711 44.719 29.944 1 0.96292 0.80017 0 5963600 2868800 3094800 28344 160 10731 11022 44337 44337 QAVFFVGQSAR 11 0 1 Unmodified _QAVFFVGQSAR_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.3275 2 605.32238 1208.63021 78067.94 0.41138 0.00024902 0.092255 5.5844E-05 0.50364 0.00030486 605.322576514151 610.326421077355 82.91 0.38283 82.91 82.713 83.096 0 103 22 6 0 0 0 0.01237 1 45114 47.894 39.361 1 1.608 1.343 0 3244900 1207100 2037800 28345 684 10732 11023 44338 44338 QAVFFVGQSAR 11 0 1 Unmodified _QAVFFVGQSAR_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.3264 2 605.32238 1208.63021 79056.69 0.49908 0.00030211 -0.25372 -0.00015358 0.24536 0.00014852 605.322309577429 610.326173582916 83.017 0.49551 83.017 82.757 83.253 0 118 28 6 0 0 0 0.043879 1 44358 35.541 28.951 1 1.5262 1.3172 0 2735200 1153600 1581600 28346 684 10732 11023 44339 44339 QAVPIVEPQEPEIK 14 1 0 Unmodified _QAVPIVEPQEPEIK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.436 2 788.932688 1575.85082 69210.86 0.88772 0.00070036 -0.039166 -3.0899E-05 0.84856 0.00066946 788.932337637051 792.939840456894 96.599 0.51147 96.599 96.386 96.897 0 87 29 5 0 0 0 0.0077175 1 54241 39.917 25.227 1 2.0979 1.6297 0 3595300 1350900 2244400 28347 2100 10733 11024 44340 44340 QAVPIVEPQEPEIK 14 1 0 Unmodified _QAVPIVEPQEPEIK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.939 2 788.932688 1575.85082 70058.19 0.53214 0.00041982 -0.59075 -0.00046606 -0.058613 -4.6241E-05 788.932273562873 792.939865028993 96.459 0.57446 96.459 96.219 96.794 0 118 31 7 0 0 0 0.0055205 1 53335 43.628 29.209 1 1.999 1.6201 0 2680400 1011200 1669100 28348 2100 10733 11024 44341 44341 QAVSELDEEQHLEDEELQPPR 21 0 1 Unmodified _QAVSELDEEQHLEDEELQPPR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.3947 3 831.057623 2490.15104 64992.84 0.73692 0.00061242 0.0057463 4.7755E-06 0.74267 0.0006172 831.391675974588 834.728056237977 79.059 0.90955 79.059 78.579 79.489 0 510 81 9 0 0 0 1.6737E-11 1 46673 91.725 91.725 1 1.1086 1.2607 0 112640000 56330000 56313000 28349 2059 10734 11025 44342 44342 QAVSELDEEQHLEDEELQPPR 21 0 1 Unmodified _QAVSELDEEQHLEDEELQPPR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.7289 3 831.057623 2490.15104 64816.17 0.72063 0.00059888 -0.092896 -7.7202E-05 0.62773 0.00052168 831.391712868963 834.72796849515 78.008 0.84287 78.008 77.575 78.418 0 517 72 10 0 0 0 3.9594E-29 4 47133 127.5 127.5 1 1.0999 1.2524 0 109190000 53004000 56182000 28350 2059 10734 11025 44343;44344;44345;44346 44344 QAVSELDEEQHLEDEELQPPR 21 0 1 Unmodified _QAVSELDEEQHLEDEELQPPR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.7283 3 831.057623 2490.15104 64941.45 0.81585 0.00067802 -0.075057 -6.2377E-05 0.7408 0.00061564 831.391394315332 834.728002629237 91.004 1.5407 91.004 90.444 91.984 0 629 99 14 0 0 0 1.5E-07 3 50745 58.914 58.914 1 1.9684 1.6944 0 54901000 14237000 40664000 28351 2059 10734 11025 44347;44348;44349 44348 QAVSELDEEQHLEDEELQPPR 21 0 1 Unmodified _QAVSELDEEQHLEDEELQPPR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 834.7274 3 831.057623 2490.15104 65699.4 0.59231 0.00049225 -0.32192 -0.00026753 0.27039 0.00022471 831.391040207528 834.727793466434 90.906 1.6372 90.906 90.317 91.954 0 587 102 13 0 0 0 2.4947E-12 3 49413 98.816 98.816 1 2.0411 1.7809 0 59550000 20345000 39205000 28352 2059 10734 11025 44350;44351;44352 44351 QAVTNPNNTFYATK 14 1 0 Unmodified _QAVTNPNNTFYATK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;D6RJI2;D6RA73 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.897 2 784.888812 1567.76307 69322.41 0.77448 0.00060788 0.24532 0.00019255 1.0198 0.00080043 785.391139962725 788.895947059339 47.535 0.5013 47.535 47.271 47.772 -3.8147E-06 188 42 6 0 0 0 8.7179E-38 3 25720 170.4 170.4 1 2.4154 2.6032 0 33922000 11396000 22526000 28353 1092 10735 11026 44353;44354;44355 44353 QAVTNPNNTFYATK 14 1 0 Unmodified _QAVTNPNNTFYATK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;D6RJI2;D6RA73 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.3978 2 784.888812 1567.76307 68184.94 0.7824 0.0006141 -1.0367 -0.00081371 -0.25431 -0.00019961 785.388607393316 788.896096423832 46.428 0.55071 46.428 46.173 46.724 0 209 42 8 0 0 0 2.039E-06 4 25507 106.67 106.67 1 1.0693 1.207 0 65178000 27970000 37208000 28354 1092 10735 11026 44356;44357;44358;44359 44357 QAYEDLRK 8 1 1 Unmodified _QAYEDLRK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.7666 2 511.766906 1021.51926 84757.4 0.51074 0.00026138 0.023934 1.2249E-05 0.53468 0.00027363 511.766882162208 520.778131762654 19.23 0.31177 19.23 19.127 19.439 0 69 16 8 0 0 0 0.0016166 2 5922 122.74 67.138 1 0.91346 1.088 0 48239000 25299000 22939000 28355 2070 10736 11027 44360;44361 44360 QAYEDLRK 8 1 1 Unmodified _QAYEDLRK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.7781 2 511.766906 1021.51926 85163.06 0.0014104 7.2181E-07 0.14638 7.4914E-05 0.14779 7.5636E-05 511.767049941718 520.77837537581 19.178 0.35602 19.178 18.926 19.282 0 48 18 7 0 0 0 0.034377 1 5687 58.426 24.783 1 0.70522 0.82008 0 40250000 23365000 16885000 28356 2070 10736 11027 44362 44362 QAYEDLRK 8 1 1 Unmodified _QAYEDLRK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.7786 2 511.766906 1021.51926 83840.84 -0.11717 -5.9963E-05 0.20934 0.00010713 0.092173 4.7171E-05 511.76695583175 520.778245871747 20.4 0.45311 20.4 20.27 20.723 -1.9073E-06 53 18 6 0 0 0 2.5644E-05 2 5808 143.89 87.34 1 1.7197 1.5077 0 28945000 11075000 17870000 28357 2070 10736 11027 44363;44364 44363 QCANLQNAIADAEQR 15 0 1 Unmodified _QCANLQNAIADAEQR_ 0 0 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 851.403 2 851.402292 1700.79003 NaN NaN NaN 0.41197 0.00035075 NaN NaN NaN NaN 71.415 0.55404 71.415 71.078 71.632 0 0 0 0 8.0847E-43 2 41526 160.15 141.88 1 NaN NaN 0 12732000 12732000 0 + 28358 1162 10737 11028 44365;44366 44365 QCANLQNAIADAEQR 15 0 1 Unmodified _QCANLQNAIADAEQR_ 0 0 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 851.9043 2 851.402292 1700.79003 NaN NaN NaN -0.32678 -0.00027822 NaN NaN NaN NaN 82.564 0.67435 82.564 82.316 82.99 0 0 0 0 0.00059709 1 44846 69.602 60.413 1 NaN NaN 0 6085700 6085700 0 + 28359 1162 10737 11028 44367 44367 QCANLQNAIADAEQR 15 0 1 Unmodified _QCANLQNAIADAEQR_ 0 0 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 851.9045 2 851.402292 1700.79003 NaN NaN NaN -0.63189 -0.00053799 NaN NaN NaN NaN 82.881 0.67382 82.881 82.579 83.253 0 0 0 0 0.014642 1 44194 46.985 40.544 1 NaN NaN 0 5843300 5843300 0 + 28360 1162 10737 11028 44368 44368 QCFVVTEK 8 1 0 Unmodified _QCFVVTEK_ 0 0 0 A0A024R753;Q9NW13;C9JE21;C9JAA9;A0A0S2Z5E5 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.7592 2 505.75241 1009.49027 86283.7 0.57996 0.00029332 -0.045972 -2.3251E-05 0.53399 0.00027007 505.752111724419 509.759149915267 44.709 0.67325 44.709 44.363 45.037 0 165 48 5 0 0 0 0.054005 1 20753 42.287 15.594 1 1.0369 0.8392 0 2582400 1347600 1234800 28361 214 10738 11029 44369 44369 QCSELGICAVSVGPK 15 1 0 Unmodified _QCSELGICAVSVGPK_ 0 0 0 Q00653;A0A1P8C958;D3DR86 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.899 2 802.892183 1603.76981 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.921 1 79.92 79.42 80.42 -7.6294E-06 0 0 0 0.010607 1 48625 47.288 30.262 1 28362 1674 10739 11030 44370 44370 QCVPFRR 7 0 2 Unmodified _QCVPFRR_ 0 0 1 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 321.5045 3 321.504478 961.491604 106318.7 -0.074212 -2.3859E-05 0.034801 1.1189E-05 -0.039411 -1.2671E-05 321.50444018776 328.176568970575 24.824 0.44995 24.824 24.595 25.045 0 127 24 8 0 0 0 0.040176 1 8820 23.972 16.752 1 0.78901 0.67522 0 6044400 3351500 2692900 28363 106 10740 11031 44371 44371 QDAQSLHGDIPQK 13 1 0 Unmodified _QDAQSLHGDIPQK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.8607 2 718.860054 1435.70556 71539.85 0.55962 0.00040229 -0.076188 -5.4769E-05 0.48344 0.00034752 718.860163104331 722.86705663813 25.553 0.39133 25.553 25.372 25.763 0 100 21 6 0 0 0 3.8359E-163 2 11120 277.22 277.22 1 1.0819 1.1972 0 57851000 27401000 30450000 28364 2065 10741 11032 44372;44373 44373 QDAQSLHGDIPQK 13 1 0 Unmodified _QDAQSLHGDIPQK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.5757 3 479.575795 1435.70556 86975.73 0.0041751 2.0023E-06 -0.26345 -0.00012634 -0.25927 -0.00012434 479.575739005101 482.24682390001 25.555 0.85505 25.555 25.05 25.905 0 143 44 7 0 0 0 0.00089513 2 11118 41.967 37.062 1 1.1555 1.2952 0 65016000 31074000 33941000 28365 2065 10741 11032 44374;44375 44374 QDAQSLHGDIPQK 13 1 0 Unmodified _QDAQSLHGDIPQK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.8599 2 718.860054 1435.70556 71335.4 0.51253 0.00036844 -0.028026 -2.0147E-05 0.48451 0.00034829 718.859971973634 722.867007479327 25.248 0.45243 25.248 25.038 25.49 1.9073E-06 68 17 7 0 0 0 9.774E-123 2 10884 260.57 214.89 1 1.1771 1.2872 0 40524000 16914000 23610000 28366 2065 10741 11032 44376;44377 44377 QDAQSLHGDIPQK 13 1 0 Unmodified _QDAQSLHGDIPQK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.247 3 479.575795 1435.70556 86872.48 -0.015225 -7.3014E-06 -0.14275 -6.8459E-05 -0.15797 -7.5761E-05 479.575565035624 482.24694774698 25.284 0.57954 25.284 24.963 25.543 0 81 22 8 0 0 0 1.818E-09 2 10905 95.428 81.193 1 1.2587 1.4154 0 72425000 31124000 41301000 28367 2065 10741 11032 44378;44379 44378 QDAQSLHGDIPQK 13 1 0 Unmodified _QDAQSLHGDIPQK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 482.2467 3 479.575795 1435.70556 86862.05 0.048584 2.33E-05 -0.13809 -6.6224E-05 -0.089506 -4.2925E-05 479.575693079269 482.247104442259 29.085 0.61858 29.085 28.848 29.467 0 277 46 9 0 0 0 0.010745 2 11697 32.068 32.068 1 1.2187 1.0051 0 41793000 19908000 21885000 28368 2065 10741 11032 44380;44381 44380 QDAQSLHGDIPQK 13 1 0 Unmodified _QDAQSLHGDIPQK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.8666 2 718.860054 1435.70556 71213.23 0.54762 0.00039366 -0.080381 -5.7783E-05 0.46723 0.00033588 718.859921402334 722.86707424926 29.087 0.46299 29.087 28.871 29.334 -1.9073E-06 217 36 8 0 0 0 0.0020343 2 11698 55.401 55.401 1 1.1926 0.96804 0 26857000 11678000 15179000 28369 2065 10741 11032 44382;44383 44382 QDAQSLHGDIPQK 13 1 0 Unmodified _QDAQSLHGDIPQK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.8673 2 718.860054 1435.70556 71638.75 0.30376 0.00021836 0.20299 0.00014592 0.50674 0.00036428 718.860118724947 722.867283024084 29.345 0.56403 29.345 29.101 29.665 0 173 33 9 0 0 0 0.00011522 2 11353 91.313 91.313 1 1.2044 0.96478 0 20226000 9775300 10451000 28370 2065 10741 11032 44384;44385 44384 QDAQSLHGDIPQK 13 1 0 Unmodified _QDAQSLHGDIPQK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.2472 3 479.575795 1435.70556 87065.21 -0.047511 -2.2785E-05 -0.043177 -2.0707E-05 -0.090688 -4.3492E-05 479.575808066346 482.247151991833 29.332 0.56308 29.332 29.113 29.676 0 203 33 10 0 0 0 4.1961E-05 2 11382 73.927 64.877 1 1.2384 1.0261 0 34537000 15421000 19117000 28371 2065 10741 11032 44386;44387 44386 QDAQVVLYR 9 0 1 Unmodified _QDAQVVLYR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.8218 2 546.29583 1090.57711 84253.87 0.6047 0.00033034 -0.15624 -8.5351E-05 0.44846 0.00024499 546.295906408362 551.299572637699 50.548 0.46437 50.548 50.412 50.876 -3.8147E-06 105 39 5 0 0 0 0.018925 1 28646 93.992 68.432 1 0.64027 0.64207 0 17778000 11967000 5810200 28372 1665 10742 11033 44388 44388 QDAQVVLYR 9 0 1 Unmodified _QDAQVVLYR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.2962 2 546.29583 1090.57711 82937.46 0.40676 0.00022221 0.07495 4.0945E-05 0.48171 0.00026316 546.295700427178 551.300114595888 59.573 0.77226 59.573 59.204 59.976 -3.8147E-06 192 56 4 0 0 0 0.030744 1 30306 45.738 36.876 1 0.37378 0.31237 0 3429100 2484400 944760 28373 1665 10742 11033 44389 44389 QDAQVVLYR 9 0 1 Unmodified _QDAQVVLYR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.2957 2 546.29583 1090.57711 82817.81 0.44673 0.00024405 -0.046342 -2.5316E-05 0.40039 0.00021873 546.295780981079 551.300010715208 60.12 0.71463 60.12 59.69 60.405 3.8147E-06 182 50 5 0 0 0 0.0042933 2 29935 69.628 50.533 1 0.38852 0.34046 0 4186000 2850700 1335300 28374 1665 10742 11033 44390;44391 44390 QDDQQPLDLEGVK 13 1 0 Unmodified _QDDQQPLDLEGVK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.8718 2 742.865002 1483.71545 NaN NaN NaN 0.11602 8.6184E-05 NaN NaN NaN NaN 69.513 0.2787 69.513 69.317 69.595 0 0 0 0 0.0001675 1 40388 90.05 36.294 1 NaN NaN 0 5475300 0 5475300 28375 1680 10743 11034 44392 44392 QDDQQPLDLEGVK 13 1 0 Unmodified _QDDQQPLDLEGVK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 746.8721 2 742.865002 1483.71545 71004.04 0.7206 0.00053531 0.083998 6.2399E-05 0.80459 0.0005977 742.865265710572 746.872132966659 79.205 0.57306 79.205 78.934 79.507 0 166 33 7 0 0 0 5.3247E-05 2 42603 116.55 116.55 1 2.0653 1.6322 0 6097500 1974700 4122800 28376 1680 10743 11034 44393;44394 44393 QDDQQPLDLEGVK 13 1 0 Unmodified _QDDQQPLDLEGVK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.8651 2 742.865002 1483.71545 70715.41 0.52149 0.0003874 0.29621 0.00022005 0.81771 0.00060745 742.865120658371 746.872331668404 79.557 0.5575 79.557 79.291 79.849 0 179 34 6 0 0 0 0.00039385 2 41988 82.494 82.494 1 2.0617 1.6749 0 4462500 1279700 3182800 28377 1680 10743 11034 44395;44396 44396 QDEQVGLPGK 10 1 0 Unmodified _QDEQVGLPGK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.7847 2 535.77747 1069.54039 83039.17 0.49944 0.00026759 -0.14811 -7.9354E-05 0.35133 0.00018824 535.77734614748 539.78438325462 35.098 1.0331 35.098 34.7 35.734 0 444 93 7 0 0 0 1.3604E-05 2 17459 117.89 102.23 1 0.72797 0.82506 0 156110000 89771000 66334000 28378 1471 10744 11035 44397;44398 44397 QDEQVGLPGK 10 1 0 Unmodified _QDEQVGLPGK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.7771 2 535.77747 1069.54039 83798.91 0.95504 0.00051169 0.72514 0.00038851 1.6802 0.0009002 535.777792988004 539.784900729569 34.386 0.72569 34.386 34.044 34.77 0 306 55 8 0 0 0 3.7713E-40 2 17272 191.16 164.47 1 0.76044 0.8888 0 285720000 171640000 114080000 28379 1471 10744 11035 44399;44400 44399 QDEQVGLPGK 10 1 0 Unmodified _QDEQVGLPGK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.7848 2 535.77747 1069.54039 81684.67 0.31723 0.00016997 0.15959 8.5507E-05 0.47683 0.00025547 535.777637923528 539.784580944041 39.881 1.2133 39.881 39.478 40.692 0 486 91 9 0 0 0 0.0009561 2 18127 94.309 81.782 1 1.3398 1.1599 0 118770000 50105000 68666000 28380 1471 10744 11035 44401;44402 44401 QDEQVGLPGK 10 1 0 Unmodified _QDEQVGLPGK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.7849 2 535.77747 1069.54039 82713.27 0.30238 0.00016201 0.76429 0.00040949 1.0667 0.00057149 535.777795509178 539.784952353572 40.021 1.483 40.021 39.532 41.015 0 610 121 10 0 0 0 0.00092152 2 17679 96.034 80.372 1 1.3519 1.155 0 106490000 44384000 62110000 28381 1471 10744 11035 44403;44404 44403 QDFLPWK 7 1 0 Unmodified _QDFLPWK_ 0 0 0 A0A024R534;O94776;E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2 A0A024R534;E7EQY4 A0A024R534 MTA2;MTA3 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.2528 2 467.245078 932.475603 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.847 1 90.847 90.347 91.347 0 0 0 0 0.041027 1 54925 69.176 51.409 1 28382 168;1221 10745 11036 44405 44405 QDGQFSVLFTK 11 1 0 Unmodified _QDGQFSVLFTK_ 0 0 0 CON__P12763 CON__P12763 CON__P12763 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3257 2 635.327328 1268.6401 NaN NaN NaN -0.86948 -0.00055241 NaN NaN NaN NaN 91.937 0.43381 91.937 91.824 92.258 7.6294E-06 0 0 0 0.016416 1 56932 54.198 34.411 1 NaN NaN 0 7138900 7138900 0 + 28383 1160 10746 11037 44406 44406 QDHAQQLATAAEER 14 0 1 Unmodified _QDHAQQLATAAEER_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.378 2 784.3766 1566.73865 68561.7 0.84164 0.00066016 0.31728 0.00024886 1.1589 0.00090902 784.878498397009 789.380699656735 26.718 0.2345 26.718 26.627 26.862 1.9073E-06 24 10 4 0 0 0 0.00013299 1 12134 98.105 72.668 1 1.1703 1.1633 0 11849000 5749800 6099200 28384 186;1747;718 10747 11038 44407 44407 QDHAQQLATAAEER 14 0 1 Unmodified _QDHAQQLATAAEER_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.3817 2 784.3766 1566.73865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.808 1 26.808 26.308 27.308 0 0 0 0 0.0003963 1 12188 84.605 60.754 1 28385 186;1747;718 10747 11038 44408 44408 QDHAQQLATAAEER 14 0 1 Unmodified _QDHAQQLATAAEER_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.2532 3 523.253492 1566.73865 83144.55 0.091627 4.7944E-05 -0.036842 -1.9278E-05 0.054785 2.8666E-05 523.253427857302 526.58953862882 31.743 0.33631 31.743 31.59 31.926 0 98 17 7 0 0 0 5.3857E-05 2 13494 72.898 72.898 1 1.5362 1.2767 0 10874000 4315800 6558400 28386 186;1747;718 10747 11038 44409;44410 44410 QDHAQQLATAAEER 14 0 1 Unmodified _QDHAQQLATAAEER_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.3799 2 784.3766 1566.73865 68609.54 0.42092 0.00033016 -0.038988 -3.0581E-05 0.38193 0.00029957 784.376472442781 789.380687327645 31.732 0.29958 31.732 31.59 31.89 0 72 15 7 0 0 0 0.058147 1 13441 30.998 25.505 1 1.4647 1.2281 0 4111100 1728500 2382600 28387 186;1747;718 10747 11038 44411 44411 QDHAQQLATAAEER 14 0 1 Unmodified _QDHAQQLATAAEER_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.2532 3 523.253492 1566.73865 83061.05 0.33494 0.00017526 -0.14892 -7.7921E-05 0.18602 9.7335E-05 523.253313532662 526.589460169153 31.854 0.35367 31.854 31.671 32.024 0 121 19 8 0 0 0 0.010102 2 13072 30.328 30.328 1 1.6483 1.3715 0 6144900 2526800 3618100 28388 186;1747;718 10747 11038 44412;44413 44413 QDIAFAYQR 9 0 1 Unmodified _QDIAFAYQR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9;H0YKV8 V9HW65 V9HW65 HEL-S-270;ANXA2 Annexin;Annexin A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.28 2 556.28018 1110.54581 82940.83 0.61657 0.00034298 0.52198 0.00029037 1.1385 0.00063335 556.280194087461 561.284869499943 57.619 0.40433 57.619 57.375 57.78 -3.8147E-06 79 32 4 0 0 0 0.0060214 1 33394 65.246 52.258 1 0.86749 0.86315 0 7820600 3996200 3824300 28389 193 10748 11039 44414 44414 QDILEEIK 8 1 0 Unmodified _QDILEEIK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.2716 2 494.27149 986.528426 NaN NaN NaN 0.12859 6.3558E-05 NaN NaN NaN NaN 77.697 0.49751 77.697 77.376 77.873 0 0 0 0 0.03109 1 45926 58.596 20.436 1 NaN NaN 0 4906200 4906200 0 28390 1965 10749 11040 44415 44415 QDLPGLSSESAR 12 0 1 Unmodified _QDLPGLSSESAR_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3203 2 630.314948 1258.61534 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.239 1 53.239 52.739 53.739 0 0 0 0 0.030341 1 29747 45.598 14.911 1 28391 1795 10750 11041 44416 44416 QDPAHPHVVATGGK 14 1 0 Unmodified _QDPAHPHVVATGGK_ 0 0 0 Q6RFH5;E9PS41;B4E018 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.9124 3 471.91263 1412.71606 87532.5 -0.15191 -7.1689E-05 0.037847 1.786E-05 -0.11406 -5.3828E-05 471.912739472532 474.58410699843 18.421 0.24538 18.421 18.321 18.567 0 54 11 7 0 0 0 0.03178 1 4477 16.139 16.139 1 1.311 1.037 0 3039400 1305500 1733900 28392 1859 10751 11042 44417 44417 QDQSNVQIAAAPTPEK 16 1 0 Unmodified _QDQSNVQIAAAPTPEK_ 0 0 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.4292 2 848.928665 1695.84278 65527.25 0.6893 0.00058517 -0.026933 -2.2864E-05 0.66237 0.0005623 848.928416115715 852.935663837129 55.799 0.48788 55.799 55.577 56.065 0 161 31 7 0 0 0 0.020716 1 27977 28.361 28.361 1 1.2876 1.0519 0 2629700 1065300 1564400 28393 1928 10752 11043 44418 44418 QDQTLAELQNNMVLVK 16 1 0 Oxidation (M) _QDQTLAELQNNM(ox)VLVK_ QDQTLAELQNNM(1)VLVK QDQTLAELQNNM(47.99)VLVK 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 934.4887 2 930.480208 1858.94586 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.964 1 88.964 88.464 89.464 0 0 0 0 0.0037564 1 53676 47.991 28.314 1 28394 1421 10753 11044 44419 44419 1117 QDSINAYNEPNSTK 14 1 0 Unmodified _QDSINAYNEPNSTK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.8717 2 790.862991 1579.71143 68946.39 0.5742 0.00045411 -0.55746 -0.00044087 0.016741 1.324E-05 790.862958063221 794.870066642686 29.019 0.40457 29.019 28.901 29.305 1.9073E-06 83 22 8 0 0 0 2.4446E-197 1 13890 290.28 271.03 1 2.6629 2.9888 0 67358000 19545000 47813000 28395 1391 10754 11045 44420 44420 QDSINAYNEPNSTK 14 1 0 Unmodified _QDSINAYNEPNSTK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.8699 2 790.862991 1579.71143 NaN NaN NaN -0.381 -0.00030132 NaN NaN NaN NaN 28.387 0.7496 28.387 28.13 28.879 0 0 0 0 1.2015E-82 1 13444 199.12 181.06 1 NaN NaN 0 12496000 0 12496000 28396 1391 10754 11045 44421 44421 QDSINAYNEPNSTK 14 1 0 Unmodified _QDSINAYNEPNSTK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.8629 2 790.862991 1579.71143 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.318 1 28.318 27.818 28.818 1.9073E-06 0 0 0 1.6085E-33 1 13514 150.09 132.61 1 28397 1391 10754 11045 44422 44422 QDSINAYNEPNSTK 14 1 0 Unmodified _QDSINAYNEPNSTK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 794.8702 2 790.862991 1579.71143 70826.84 0.72876 0.00057635 -0.091672 -7.25E-05 0.63708 0.00050385 790.863027598718 794.870015864167 33.965 1.2449 33.965 33.291 34.535 0 358 106 6 0 0 0 6.2154E-05 2 14746 91.233 91.233 1 5.7126 4.4723 0 11665000 2186300 9478200 28398 1391 10754 11045 44423;44424 44423 QDSINAYNEPNSTK 14 1 0 Unmodified _QDSINAYNEPNSTK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 794.8711 2 790.862991 1579.71143 69320.77 0.67315 0.00053237 -0.027923 -2.2083E-05 0.64523 0.00051029 790.86297551494 794.870002818912 34.055 1.1011 34.055 33.632 34.734 -3.8147E-06 368 88 6 0 0 0 8.3222E-05 1 14408 88.021 84.596 1 4.9857 4.0944 0 12329000 2591900 9736700 28399 1391 10754 11045 44425 44425 QDSLVINLNR 10 0 1 Unmodified _QDSLVINLNR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.3254 2 586.325119 1170.63569 78714.57 0.48018 0.00028154 0.069888 4.0977E-05 0.55007 0.00032252 586.325123941851 591.329239057103 78.48 1.1043 78.48 77.738 78.842 0 441 92 8 0 0 0 4.0442E-08 2 46284 117.76 96.165 1 0.698 0.79009 0 104910000 63623000 41288000 28400 2148 10755 11046 44426;44427 44427 QDSLVINLNR 10 0 1 Unmodified _QDSLVINLNR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.3253 2 586.325119 1170.63569 78574.88 0.72761 0.00042662 0.064661 3.7912E-05 0.79227 0.00046453 586.325066011277 591.329184208231 77.48 0.89116 77.48 76.93 77.821 0 400 73 8 0 0 0 7.5076E-06 2 46677 107.1 94.08 1 0.67067 0.76902 0 178070000 105170000 72893000 28401 2148 10755 11046 44428;44429 44429 QDSLVINLNR 10 0 1 Unmodified _QDSLVINLNR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.3255 2 586.325119 1170.63569 78943.05 0.62798 0.0003682 -0.057107 -3.3483E-05 0.57087 0.00033472 586.325047673181 591.329241749227 89.405 1.3659 89.405 88.675 90.041 -7.6294E-06 424 89 8 0 0 0 0.035161 1 49272 40.725 35.784 1 0.93819 0.80132 0 38228000 20274000 17953000 28402 2148 10755 11046 44430 44430 QDSLVINLNR 10 0 1 Unmodified _QDSLVINLNR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.3254 2 586.325119 1170.63569 78359.7 0.27538 0.00016146 0.23857 0.00013988 0.51395 0.00030134 586.325229928018 591.329353838438 89.367 1.2 89.367 88.975 90.174 -7.6294E-06 359 76 8 0 0 0 0.00038137 2 48468 88.136 81.192 1 0.91432 0.79753 0 38728000 20179000 18548000 28403 2148 10755 11046 44431;44432 44432 QDTYGDIYNFPIHAFDK 17 1 0 Unmodified _QDTYGDIYNFPIHAFDK_ 0 0 0 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.3212 3 681.986412 2042.93741 73043.8 0.68875 0.00046972 0.21109 0.00014396 0.89984 0.00061368 682.320858865112 684.992149207069 119.99 0.59052 119.99 119.77 120.36 0 155 26 10 0 0 0 0.0058478 2 71111 27.514 27.514 1 1.2072 0.94597 0 16654000 7744000 8910000 28404 2016 10756 11047 44433;44434 44434 QDTYGDIYNFPIHAFDK 17 1 0 Unmodified _QDTYGDIYNFPIHAFDK_ 0 0 0 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.6586 3 681.986412 2042.93741 73929.47 0.75799 0.00051694 -0.059259 -4.0414E-05 0.69873 0.00047652 682.320712564967 684.657715167744 119.75 0.56075 119.75 119.56 120.12 0 148 23 10 0 0 0 2.4827E-05 2 70046 54.355 54.355 1 1.2023 0.96508 0 22155000 10727000 11428000 28405 2016 10756 11047 44435;44436 44436 QDVDDEYGVSQALAR 15 0 1 Unmodified _QDVDDEYGVSQALAR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.3901 2 833.389373 1664.76419 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.103 1 73.103 72.603 73.603 7.6294E-06 0 0 0 0.0010916 1 42896 75.088 61.66 1 28406 695 10757 11048 44437 44437 QDVDDEYGVSQALAR 15 0 1 Unmodified _QDVDDEYGVSQALAR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.3954 2 833.389373 1664.76419 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.368 1 72.368 71.868 72.868 0 0 0 0 3.1728E-11 1 43435 110.31 95.626 1 28407 695 10757 11048 44438 44438 QDVDDEYGVSQALAR 15 0 1 Unmodified _QDVDDEYGVSQALAR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 838.8934 2 833.389373 1664.76419 68795.8 0.79191 0.00065997 -0.76865 -0.00064058 0.023264 1.9388E-05 833.389082602912 838.39266223243 84.093 0.63726 84.093 83.862 84.499 0 214 51 7 0 0 0 0.00022341 1 45039 69.03 63.185 1 1.6264 1.3494 0 5690400 1817200 3873100 28408 695 10757 11048 44439 44439 QDVDNASLAR 10 0 1 Unmodified _QDVDNASLAR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.77 2 544.770177 1087.5258 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.048 1 25.048 24.548 25.548 0 0 0 0 1.2266E-08 1 10704 117.31 75.882 1 28409 1457 10758 11049 44440 44440 QDVDNASLAR 10 0 1 Unmodified _QDVDNASLAR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.7703 2 544.770177 1087.5258 84335.88 0.8271 0.00045058 0.4715 0.00025686 1.2986 0.00070744 544.770366349237 549.77435979842 24.764 0.31417 24.764 24.594 24.908 0 64 14 6 0 0 0 1.2687E-08 2 10440 123.35 107.69 1 1.2994 1.4219 0 33622000 14129000 19493000 28410 1457 10758 11049 44441;44442 44442 QDVDNASLAR 10 0 1 Unmodified _QDVDNASLAR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.7747 2 544.770177 1087.5258 84608.66 0.53064 0.00028908 -0.12685 -6.9104E-05 0.40379 0.00021997 544.770182556547 549.774241436202 27.68 0.473 27.68 27.476 27.949 0 70 17 6 0 0 0 0.0075601 1 10901 57.267 48.085 1 3.3808 2.897 0 6110300 1288600 4821700 28411 1457 10758 11049 44443 44443 QDWGPITSISFR 12 0 1 Unmodified _QDWGPITSISFR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.3584 2 703.856783 1405.69901 74931.02 0.56531 0.0003979 0.50683 0.00035674 1.0721 0.00075464 703.857004861967 708.861332465297 109.86 0.47969 109.86 109.62 110.1 7.6294E-06 129 34 6 0 0 0 0.00079352 3 68818 65.719 65.719 1 0.66223 0.6931 0 10819000 6653000 4166100 28412 486 10759 11050 44444;44445;44446 44446 QDWGPITSISFR 12 0 1 Unmodified _QDWGPITSISFR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.8585 2 703.856783 1405.69901 73719.2 0.72171 0.00050798 0.23183 0.00016317 0.95354 0.00067116 703.856866576403 708.861176143395 109.3 0.49595 109.3 109.03 109.52 0 113 34 5 0 0 0 6.1296E-13 2 70084 133.89 124.56 1 0.78389 0.78231 0 16719000 9681400 7037100 28413 486 10759 11050 44447;44448 44448 QDWVDGEPTEAEK 13 1 0 Unmodified _QDWVDGEPTEAEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.3339 2 752.333535 1502.65252 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.737 1 49.737 49.237 50.237 0 0 0 0 0.0044447 1 27396 60.434 54.462 1 28414 1665 10760 11051 44449 44449 QDWVDGEPTEAEK 13 1 0 Unmodified _QDWVDGEPTEAEK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.3334 2 752.333535 1502.65252 NaN NaN NaN -0.35271 -0.00026536 NaN NaN NaN NaN 57.767 0.58669 57.767 57.489 58.076 3.8147E-06 0 0 0 0.00063328 1 29301 80.737 74.354 1 NaN NaN 0 4021900 4021900 0 28415 1665 10760 11051 44450 44450 QEAATLAANNTQLQAR 16 0 1 Unmodified _QEAATLAANNTQLQAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.9418 2 850.439732 1698.86491 66419.4 0.6552 0.00055721 -0.16381 -0.00013931 0.49139 0.0004179 850.439947753805 855.944923556858 47.697 0.34345 47.697 47.475 47.819 0 101 30 6 0 0 0 1.5289E-10 1 25796 90.793 90.793 1 0.73681 0.7511 0 18656000 12628000 6028600 28416 186;1747;718 10761 11052 44451 44451 QEAATLAANNTQLQAR 16 0 1 Unmodified _QEAATLAANNTQLQAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.9423 2 850.439732 1698.86491 66804.67 0.7821 0.00066513 0.0046494 3.954E-06 0.78675 0.00066908 850.439941869599 855.444017309788 46.533 0.33852 46.533 46.344 46.683 0 86 26 5 0 0 0 1.5925E-44 1 25673 166.7 157.27 1 0.79897 0.80087 0 17265000 7942000 9322700 28417 186;1747;718 10761 11052 44452 44452 QEAATLAANNTQLQAR 16 0 1 Unmodified _QEAATLAANNTQLQAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 850.4405 2 850.439732 1698.86491 65918.04 0.68738 0.00058458 -0.15242 -0.00012962 0.53497 0.00045496 850.43968407259 855.443700811206 55.286 0.55838 55.286 54.97 55.528 3.8147E-06 223 36 8 0 0 0 9.481E-18 2 27658 133.48 133.48 1 1.4915 1.2241 0 12152000 4973300 7178600 28418 186;1747;718 10761 11052 44453;44454 44454 QEAATLAANNTQLQAR 16 0 1 Unmodified _QEAATLAANNTQLQAR_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 855.4443 2 850.439732 1698.86491 65725.77 0.58633 0.00049864 -0.030567 -2.5995E-05 0.55576 0.00047264 850.439814691498 855.443710601308 55.796 0.57736 55.796 55.518 56.095 0 220 36 9 0 0 0 6.7473E-19 2 27368 137.62 137.62 1 1.4068 1.1374 0 11558000 4768100 6789800 28419 186;1747;718 10761 11052 44455;44456 44455 QEAEIPGANLNVEGTSTPLLR 21 0 1 Unmodified _QEAEIPGANLNVEGTSTPLLR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1110.5819 2 1105.07659 2208.13863 59140.13 0.045707 5.051E-05 0.67028 0.00074071 0.71598 0.00079122 1105.57835080782 1110.08133436959 120.15 0.58025 120.15 119.92 120.5 0 99 25 8 0 0 0 1.4634E-07 1 71209 63.29 63.29 1 1.6689 1.4219 0 8974300 3516200 5458100 28420 44 10762 11053 44457 44457 QEAEIPGANLNVEGTSTPLLR 21 0 1 Unmodified _QEAEIPGANLNVEGTSTPLLR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1110.0792 2 1105.07659 2208.13863 59914.04 0.26609 0.00029405 0.30229 0.00033406 0.56838 0.00062811 1105.57831595063 1110.58243320947 119.88 0.37508 119.88 119.72 120.1 0 79 14 8 0 0 0 1.1036E-06 1 70152 52.823 52.823 1 1.6103 1.2982 0 11076000 3337600 7738200 28421 44 10762 11053 44458 44458 QEAENQQLADAVLAGR 16 0 1 Unmodified _QEAENQQLADAVLAGR_ 0 0 0 U3KQ54;Q6P1K2;D3DVB3;A0A087WT04 U3KQ54 U3KQ54 PMF1-BGLAP;PMF1;hCG_1999356 Polyamine-modulated factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.9373 2 856.931739 1711.84893 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.751 1 80.751 80.251 81.251 0 0 0 0 0.012723 1 48046 44.426 18.989 1 28422 1852 10763 11054 44459 44459 QEAENQQLADAVLAGR 16 0 1 Unmodified _QEAENQQLADAVLAGR_ 0 0 0 U3KQ54;Q6P1K2;D3DVB3;A0A087WT04 U3KQ54 U3KQ54 PMF1-BGLAP;PMF1;hCG_1999356 Polyamine-modulated factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 856.9328 2 856.931739 1711.84893 67159.68 0.60986 0.00052261 0.08637 7.4013E-05 0.69623 0.00059662 856.931755233459 861.935996191256 92.803 0.539 92.803 92.569 93.108 0 122 32 6 0 0 0 0.022093 2 51723 35.657 27.681 1 1.1003 0.91996 0 3645300 1576600 2068700 28423 1852 10763 11054 44460;44461 44460 QEAENQQLADAVLAGR 16 0 1 Unmodified _QEAENQQLADAVLAGR_ 0 0 0 U3KQ54;Q6P1K2;D3DVB3;A0A087WT04 U3KQ54 U3KQ54 PMF1-BGLAP;PMF1;hCG_1999356 Polyamine-modulated factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 856.9334 2 856.931739 1711.84893 67745.79 0.31761 0.00027217 0.59244 0.00050768 0.91005 0.00077985 857.433868783338 861.936390076296 92.884 0.46761 92.884 92.606 93.074 0 111 29 6 0 0 0 0.00033164 1 50901 53.754 45.449 1 0.85857 0.75109 0 2554900 1388500 1166400 28424 1852 10763 11054 44462 44462 QEDKDDLDVTELTNEDLLDQLVK 23 2 0 Unmodified _QEDKDDLDVTELTNEDLLDQLVK_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 902.3992 3 896.774782 2687.30252 64487.45 0.70782 0.00063476 -0.44269 -0.00039699 0.26513 0.00023776 897.109062299469 902.451414394258 124.12 0.81029 124.12 123.8 124.61 0 270 54 9 0 0 0 0.018896 1 80571 27.928 27.928 1 0.70902 0.83732 0 15189000 7632500 7556500 28425 334;1562 10764 11055 44463 44463 QEDKDDLDVTELTNEDLLDQLVK 23 2 0 Unmodified _QEDKDDLDVTELTNEDLLDQLVK_ 0 0 1 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.7762 3 896.774782 2687.30252 63728.78 0.76403 0.00068516 -0.24319 -0.00021808 0.52084 0.00046708 897.109447464349 902.452121462073 123.7 0.79762 123.7 123.35 124.15 0 367 55 12 0 0 0 0.00086698 2 82301 31.976 31.976 1 0.98946 1.1311 0 15826000 8555600 7270500 28426 334;1562 10764 11055 44464;44465 44465 QEELEAALQR 10 0 1 Unmodified _QEELEAALQR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.8105 2 593.806759 1185.59897 79170.91 0.61907 0.00036761 -0.065548 -3.8923E-05 0.55352 0.00032869 593.806245665395 598.810631738446 55.262 0.46207 55.262 54.928 55.39 0 142 45 4 0 0 0 2.4126E-09 1 30965 127.68 87.411 1 1.0705 1.1027 0 19753000 6899900 12854000 + 28427 1171;1158 10765 11056 44466 44466 QEELQQLEQQR 11 0 1 Unmodified _QEELQQLEQQR_ 0 0 0 Q15149;D3DWL0;H0YDN1 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.8622 2 714.857512 1427.70047 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.875 1 46.875 46.375 47.375 0 0 0 0 1.3436E-08 1 25953 108.15 55.892 1 28428 1754 10766 11057 44467 44467 QEESVDPDYWEK 12 1 0 Unmodified _QEESVDPDYWEK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.8366 2 762.828086 1523.64162 70701.2 0.68101 0.0005195 0.40168 0.00030641 1.0827 0.00082591 762.828312669846 766.835703549848 63.963 0.61603 63.963 63.75 64.366 0 182 53 4 0 0 0 0.00022681 1 36678 84.198 84.198 1 0.80595 0.8338 0 12717000 7112900 5604300 28429 515 10767 11058 44468 44468 QEESVDPDYWEK 12 1 0 Unmodified _QEESVDPDYWEK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.8365 2 762.828086 1523.64162 70698.03 0.43586 0.00033248 0.31304 0.0002388 0.7489 0.00057128 762.827991362421 766.835804833666 62.992 0.64724 62.992 62.693 63.341 0 176 55 4 0 0 0 0.031554 1 36885 35.664 35.664 1 0.80629 0.83303 0 11435000 5225500 6209000 28430 515 10767 11058 44469 44469 QEESVDPDYWEK 12 1 0 Unmodified _QEESVDPDYWEK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.8355 2 762.828086 1523.64162 69817.81 0.63661 0.00048562 -0.10668 -8.1376E-05 0.52993 0.00040425 762.827902258213 766.83503565858 74.348 0.55443 74.348 74.09 74.645 0 186 36 7 0 0 0 0.034762 1 38530 35.138 35.138 1 2.3486 1.9272 0 5162200 1648300 3513900 28431 515 10767 11058 44470 44470 QEIAEINR 8 0 1 Unmodified _QEIAEINR_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7589 2 486.759081 971.503609 NaN NaN NaN -0.22441 -0.00010923 NaN NaN NaN NaN 29.664 0.25433 29.664 29.535 29.789 0 0 0 0 0.0097797 1 14312 77.923 36.27 1 NaN NaN 0 13061000 13061000 0 + 28432 859;1154 10768 11059 44471 44471 QEIECQNQEYSLLLSIK 17 1 0 Unmodified _QEIECQNQEYSLLLSIK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1048.5212 2 1048.02244 2094.03032 NaN NaN NaN 0.16181 0.00016958 NaN NaN NaN NaN 111.51 0.587 111.51 111.28 111.86 0 0 0 0 8.9696E-20 3 70110 130.1 112.51 1 NaN NaN 0 48016000 48016000 0 + 28433 1165 10769 11060 44472;44473;44474 44473 QEIECQNQEYSLLLSIK 17 1 0 Unmodified _QEIECQNQEYSLLLSIK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1048.5251 2 1048.02244 2094.03032 NaN NaN NaN 0.02507 2.6274E-05 NaN NaN NaN NaN 111.03 0.56768 111.03 110.74 111.3 0 0 0 0 1.9886E-26 1 71444 135.58 121.23 1 NaN NaN 0 33261000 33261000 0 + 28434 1165 10769 11060 44475 44475 QEIECQNQEYSLLLSIK 17 1 0 Unmodified _QEIECQNQEYSLLLSIK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1048.5261 2 1048.02244 2094.03032 NaN NaN NaN -0.10031 -0.00010513 NaN NaN NaN NaN 123.05 0.61433 123.05 122.77 123.38 0 0 0 0 2.5471E-09 1 73339 101.32 90.215 1 NaN NaN 0 38775000 38775000 0 + 28435 1165 10769 11060 44476 44476 QEMAFYSLPEFEEWK 15 1 0 Oxidation (M) _QEM(ox)AFYSLPEFEEWK_ QEM(1)AFYSLPEFEEWK QEM(65.84)AFYSLPEFEEWK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.9456 2 975.434935 1948.85532 62981.91 0.42972 0.00041917 0.044022 4.294E-05 0.47374 0.00046211 975.434970224956 979.943998094534 117.36 0.54192 117.36 117.11 117.65 0 284 39 10 0 0 0 0.00010724 2 74995 72.29 72.29 1 0.78537 0.86045 0 52467000 28727000 23740000 28436 1471 10770 11061 44477;44478 44477 1209 QEMAFYSLPEFEEWK 15 1 0 Oxidation (M) _QEM(ox)AFYSLPEFEEWK_ QEM(1)AFYSLPEFEEWK QEM(145.09)AFYSLPEFEEWK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.9363 2 975.434935 1948.85532 62012.64 0.33107 0.00032294 0.21507 0.00020978 0.54614 0.00053272 975.434987404201 979.944257017773 116.89 0.54994 116.89 116.64 117.19 0 243 33 10 0 0 0 2.1071E-22 3 76457 145.09 138.65 1 0.81506 0.90512 0 49488000 28019000 21469000 28437 1471 10770 11061 44479;44480;44481 44480 1209 QEMAFYSLPEFEEWK 15 1 0 Oxidation (M) _QEM(ox)AFYSLPEFEEWK_ QEM(1)AFYSLPEFEEWK QEM(44.51)AFYSLPEFEEWK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 979.9434 2 975.434935 1948.85532 60968.75 0.46072 0.0004494 0.032937 3.2128E-05 0.49365 0.00048153 975.936544650496 979.442179312332 129.01 0.66458 129.01 128.72 129.38 0 199 26 11 0 0 0 0.0012503 1 77023 44.511 44.173 1 0.94516 0.77293 0 26612000 12895000 13717000 28438 1471 10770 11061 44482 44482 1209 QEMLVQYLQDAYSFSR 16 0 1 Oxidation (M) _QEM(ox)LVQYLQDAYSFSR_ QEM(1)LVQYLQDAYSFSR QEM(144.47)LVQYLQDAYSFSR 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 997.9714 2 997.46984 1992.92513 60178.6 0.58407 0.00058259 -0.056843 -5.6699E-05 0.52723 0.00052589 997.97178349288 1002.97678107216 118.15 0.483 118.15 117.87 118.36 0 141 27 6 0 0 0 4.2786E-25 2 75753 144.47 144.47 1 0.96499 0.99491 0 14048000 6939200 7108800 28439 908 10771 11062 44483;44484 44484 746 QEMLVQYLQDAYSFSR 16 0 1 Oxidation (M) _QEM(ox)LVQYLQDAYSFSR_ QEM(1)LVQYLQDAYSFSR QEM(92.19)LVQYLQDAYSFSR 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1002.9761 2 997.46984 1992.92513 60565.76 0.81789 0.00081582 -0.36244 -0.00036152 0.45545 0.0004543 997.469510044487 1002.47352479145 117.72 0.45197 117.72 117.48 117.93 0 152 30 6 0 0 0 1.2091E-06 2 77173 92.19 90.412 1 0.92029 0.92215 0 18351000 9925700 8425600 28440 908 10771 11062 44485;44486 44485 746 QEMLVQYLQDAYSFSR 16 0 1 Oxidation (M) _QEM(ox)LVQYLQDAYSFSR_ QEM(1)LVQYLQDAYSFSR QEM(87.5)LVQYLQDAYSFSR 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1002.9765 2 997.46984 1992.92513 60248.11 0.32186 0.00032104 -0.25344 -0.0002528 0.068421 6.8248E-05 997.46984832941 1002.47411527336 130.57 0.67358 130.57 130.35 131.03 0 205 31 9 0 0 0 1.9237E-06 2 79075 87.498 85.441 1 1.1044 0.94929 0 6593800 2965100 3628700 28441 908 10771 11062 44487;44488 44487 746 QEMLVQYLQDAYSFSR 16 0 1 Oxidation (M) _QEM(ox)LVQYLQDAYSFSR_ QEM(1)LVQYLQDAYSFSR QEM(77.53)LVQYLQDAYSFSR 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 997.9705 2 997.46984 1992.92513 60325.42 0.61339 0.00061183 -0.7618 -0.00075987 -0.14841 -0.00014804 997.469466931847 1002.47399772827 130.37 0.58623 130.37 130.16 130.74 0 146 24 8 0 0 0 5.9845E-05 3 78043 77.527 72.043 1 1.0834 0.90232 0 7015400 3547200 3468100 28442 908 10771 11062 44489;44490;44491 44491 746 QENEDSSDATTPVPR 15 0 1 Unmodified _QENEDSSDATTPVPR_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.3693 2 823.368638 1644.72272 NaN NaN NaN -0.55012 -0.00045295 NaN NaN NaN NaN 28.56 0.16192 28.56 28.469 28.631 -1.9073E-06 0 0 0 0.0012505 1 13525 66.267 51.255 1 NaN NaN 0 3247400 3247400 0 28443 135 10772 11063 44492 44492 QENEDSSDATTPVPR 15 0 1 Unmodified _QENEDSSDATTPVPR_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.8715 2 823.368638 1644.72272 68212.38 0.67202 0.00055332 0.19247 0.00015847 0.86449 0.00071179 823.368658321938 828.874463074182 27.934 0.15939 27.934 27.835 27.995 0 24 9 4 0 0 0 0.00012932 1 13181 80.69 74.718 1 0.58745 0.59276 0 5948700 4121200 1827500 28444 135 10772 11063 44493 44493 QENEDSSDATTPVPR 15 0 1 Unmodified _QENEDSSDATTPVPR_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 828.374 2 823.368638 1644.72272 69768.23 0.5257 0.00043285 0.2366 0.00019481 0.7623 0.00062766 823.368345705318 828.373052948403 32.431 0.30369 32.431 32.269 32.573 0 54 13 5 0 0 0 0.0023099 2 13941 45.28 39.177 1 1.7355 1.4948 0 2666300 1089500 1576900 28445 135 10772 11063 44494;44495 44494 QENEDSSDATTPVPR 15 0 1 Unmodified _QENEDSSDATTPVPR_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 828.8766 2 823.368638 1644.72272 68309.26 0.6833 0.00056261 -0.073851 -6.0807E-05 0.60945 0.0005018 823.368684877986 828.372728739997 32.601 0.29613 32.601 32.44 32.736 3.8147E-06 62 14 6 0 0 0 0.014891 2 13586 33.204 32.295 1 1.7484 1.5787 0 2097300 807110 1290200 28446 135 10772 11063 44496;44497 44496 QEPENDQGVVSQAGK 15 1 0 Unmodified _QEPENDQGVVSQAGK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.3785 2 793.376266 1584.73798 NaN NaN NaN 0.86628 0.00068729 NaN NaN NaN NaN 24.506 0.25698 24.506 24.337 24.594 -1.9073E-06 0 0 0 0.00060455 1 10266 69.451 51.139 1 NaN NaN 0 1988100 1988100 0 28447 2002 10773 11064 44498 44498 QEPENDQGVVSQAGK 15 1 0 Unmodified _QEPENDQGVVSQAGK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.376 2 793.376266 1584.73798 NaN NaN NaN -0.44116 -0.00035001 NaN NaN NaN NaN 24.314 0.23318 24.314 24.127 24.36 0 0 0 0 9.1703E-05 1 10064 79.82 58.357 1 NaN NaN 0 3226900 3226900 0 28448 2002 10773 11064 44499 44499 QEPENDQGVVSQAGK 15 1 0 Unmodified _QEPENDQGVVSQAGK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 797.8856 2 793.376266 1584.73798 69215.17 0.61348 0.00048672 0.00026054 2.0671E-07 0.61374 0.00048692 793.37580683992 797.383454672025 27.592 0.48243 27.592 27.373 27.856 1.9073E-06 77 17 7 0 0 0 0.00060268 1 10781 53.967 49.949 1 2.231 1.8496 0 2296400 868230 1428200 28449 2002 10773 11064 44500 44500 QEPENDQGVVSQAGKDDR 18 1 1 Unmodified _QEPENDQGVVSQAGKDDR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.3065 3 657.971602 1970.89298 74477.98 0.46794 0.00030789 0.02256 1.4844E-05 0.4905 0.00032274 657.971571540373 663.979073854845 25.609 0.47866 25.609 25.396 25.875 0 104 19 8 0 0 0 0.0004356 2 9401 38.915 38.915 1 1.5357 1.2625 0 4427500 1685200 2742300 28450 2002 10774 11065 44501;44502 44502 QEPLLIGSTK 10 1 0 Unmodified _QEPLLIGSTK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.3223 2 543.313689 1084.61282 85624 0.52779 0.00028675 0.31519 0.00017125 0.84298 0.000458 543.31371256102 547.321080976424 61.458 0.47325 61.458 61.258 61.731 0 107 37 4 0 0 0 0.00078086 1 35174 81.338 53.455 1 1.6643 1.6584 0 7929000 3195000 4734000 28451 587 10775 11066 44503 44503 QEPLLIGSTK 10 1 0 Unmodified _QEPLLIGSTK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.64 2 543.313689 1084.61282 84911.52 0.23899 0.00012985 0.6897 0.00037473 0.92869 0.00050457 543.815952926563 547.320942564406 60.188 0.37579 60.188 59.996 60.372 0 66 21 4 0 0 0 0.045808 1 35099 61.78 28.939 1 1.7767 1.7934 0 8114300 3286200 4828100 28452 587 10775 11066 44504 44504 QEQDLLHK 8 1 0 Unmodified _QEQDLLHK_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.7667 2 505.766906 1009.51926 87270.43 0.18515 9.3642E-05 -0.059009 -2.9845E-05 0.12614 6.3797E-05 505.766908804903 509.773961430479 23.173 0.31374 23.173 23.032 23.346 -1.9073E-06 71 14 8 0 0 0 0.0084049 2 7773 78.77 30.015 1 0.86601 0.68344 0 5377400 2655500 2721900 28453 1997 10776 11067 44505;44506 44506 QEQLTPGVVYVR 12 0 1 Unmodified _QEQLTPGVVYVR_ 0 0 0 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.8851 2 694.880259 1387.74596 74243.02 0.47369 0.00032916 0.56479 0.00039246 1.0385 0.00072162 694.880636695951 699.884958349442 76.226 0.39345 76.226 76.037 76.431 -7.6294E-06 139 34 6 0 0 0 7.6701E-13 2 45966 132.88 116.24 1 0.99274 0.99552 0 17319000 7964300 9354600 28454 2019 10777 11068 44507;44508 44507 QEQLTPGVVYVR 12 0 1 Unmodified _QEQLTPGVVYVR_ 0 0 0 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 695.3824 2 694.880259 1387.74596 74036.45 0.68201 0.00047391 -0.22077 -0.00015341 0.46124 0.00032051 694.879883452702 699.884085086779 88.401 0.53397 88.401 88.158 88.692 0 149 31 6 0 0 0 6.1359E-05 2 48731 98.055 85.439 1 1.3977 1.1732 0 4220400 1752300 2468200 28455 2019 10777 11068 44509;44510 44510 QEQLTPGVVYVR 12 0 1 Unmodified _QEQLTPGVVYVR_ 0 0 0 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 699.8849 2 694.880259 1387.74596 74436.97 0.42215 0.00029334 0.17949 0.00012472 0.60164 0.00041807 694.880139681825 699.884273050468 88.398 0.51103 88.398 88.166 88.678 0 124 26 6 0 0 0 0.00021155 2 47890 81.099 72.879 1 1.3506 1.1735 0 4294500 1919900 2374600 28456 2019 10777 11068 44511;44512 44511 QEQQEGPVGPAPSRPALQEK 20 1 1 Unmodified _QEQQEGPVGPAPSRPALQEK_ 0 0 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.3757 3 716.034425 2145.08144 71623.88 0.46869 0.0003356 -0.15253 -0.00010922 0.31616 0.00022638 716.369195627467 722.04197389738 38.687 0.34542 38.687 38.511 38.857 0 189 30 8 0 0 0 8.8701E-07 2 20401 70.837 65.58 1 0.83418 0.97229 0 44326000 23270000 21057000 28457 1933 10778 11069 44513;44514 44514 QEQQEGPVGPAPSRPALQEK 20 1 1 Unmodified _QEQQEGPVGPAPSRPALQEK_ 0 0 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 716.3696 3 716.034425 2145.08144 71178.49 0.54307 0.00038886 0.093051 6.6628E-05 0.63612 0.00045549 716.369122663841 722.376090772179 46.105 0.52909 46.105 45.852 46.381 -3.8147E-06 290 40 9 0 0 0 0.0020368 1 22117 29.818 26.43 1 1.2756 1.1113 0 21029000 8865000 12164000 28458 1933 10778 11069 44515 44515 QEQQEGPVGPAPSRPALQEK 20 1 1 Unmodified _QEQQEGPVGPAPSRPALQEK_ 0 0 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.376 3 716.034425 2145.08144 71417.27 0.46153 0.00033047 -0.069888 -5.0042E-05 0.39164 0.00028043 716.368842526786 722.041889469888 46.289 0.5695 46.289 46.04 46.61 0 233 33 9 0 0 0 4.4986E-09 2 21641 87.49 87.49 1 1.35 1.1438 0 15162000 6689800 8472100 28459 1933 10778 11069 44516;44517 44516 QESDEESRPQNANYPR 16 0 2 Unmodified _QESDEESRPQNANYPR_ 0 0 1 A0A024R784;O15164;B4DYZ9 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.2932 3 640.620792 1918.84055 75685.83 0.17091 0.00010949 0.18975 0.00012156 0.36067 0.00023105 640.954808874194 647.293538416003 20.91 0.20076 20.91 20.83 21.031 0 65 18 5 0 0 0 5.5814E-05 1 6149 77.746 72.318 1 1.2963 1.1842 0 2079500 815640 1263900 28460 217 10779 11070 44518 44518 QESDEESRPQNANYPR 16 0 2 Unmodified _QESDEESRPQNANYPR_ 0 0 1 A0A024R784;O15164;B4DYZ9 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.2921 3 640.620792 1918.84055 76305.84 0.14453 9.2587E-05 -0.0017019 -1.0903E-06 0.14282 9.1497E-05 640.620758049555 647.293080567952 20.866 0.27934 20.866 20.742 21.021 0 50 12 6 0 0 0 0.042937 1 5680 20.048 18.179 1 1.391 1.2397 0 873290 407490 465800 28461 217 10779 11070 44519 44519 QESDQLVLNQHPASDK 16 1 0 Unmodified _QESDQLVLNQHPASDK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.9661 3 603.630628 1807.87006 78009.84 0.5617 0.00033906 0.09863 5.9536E-05 0.66033 0.00039859 603.630689898382 606.302335343735 35.988 0.29155 35.988 35.84 36.131 0 68 24 4 0 0 0 0.024415 1 18459 24.793 24.793 1 0.53808 0.54221 0 13402000 7149400 6252600 28462 1486 10780 11071 44520 44520 QESGSEIHVEVK 12 1 0 Unmodified _QESGSEIHVEVK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3376 2 671.335881 1340.65721 75342.66 0.86957 0.00058377 -0.65275 -0.00043822 0.21682 0.00014556 671.336034273025 675.342392758332 30.417 0.23392 30.417 30.24 30.474 1.9073E-06 54 19 6 0 0 0 4.6622E-06 2 14877 110.54 69.547 1 1.8647 1.898 0 17990000 6929300 11061000 28463 1569;1864 10781 11072 44521;44522 44522 QESGSEIHVEVK 12 1 0 Unmodified _QESGSEIHVEVK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.5648 3 447.893013 1340.65721 90392.8 0.071103 3.1846E-05 0.52994 0.00023736 0.60104 0.0002692 447.893081452746 450.564538841179 30.519 0.79882 30.519 30.229 31.027 0 289 70 6 0 0 0 0.00102 2 14953 55.314 44.669 1 1.8789 2.0403 0 46375000 16242000 30133000 28464 1569;1864 10781 11072 44523;44524 44524 QESGSEIHVEVK 12 1 0 Unmodified _QESGSEIHVEVK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.7981 2 671.335881 1340.65721 75342.77 0.52306 0.00035115 0.87571 0.00058789 1.3988 0.00093904 671.337111433881 675.844738265961 30.564 0.40713 30.564 30.438 30.845 1.9073E-06 92 36 5 0 0 0 0.00066023 1 14890 96.113 70.175 1 1.7207 1.7206 0 26587000 9464100 17122000 28465 1569;1864 10781 11072 44525 44525 QESGSEIHVEVK 12 1 0 Unmodified _QESGSEIHVEVK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.5645 3 447.893013 1340.65721 91676.35 0.62094 0.00027812 0.025005 1.12E-05 0.64595 0.00028931 447.893094160031 450.564427396995 29.883 0.79425 29.883 29.603 30.397 0 254 61 7 0 0 0 7.1562E-05 2 14468 79.492 66.865 1 2.1477 2.4214 0 61500000 22819000 38681000 28466 1569;1864 10781 11072 44526;44527 44526 QESGSEIHVEVK 12 1 0 Unmodified _QESGSEIHVEVK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.8445 2 671.335881 1340.65721 NaN NaN NaN -0.5949 -0.00039938 NaN NaN NaN NaN 29.825 0.68842 29.825 29.64 30.328 0 0 0 0 0.0021631 1 14470 69.786 35.065 1 NaN NaN 0 14440000 0 14440000 28467 1569;1864 10781 11072 44528 44528 QESGSEIHVEVK 12 1 0 Unmodified _QESGSEIHVEVK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 450.5644 3 447.893013 1340.65721 90656.16 0.038668 1.7319E-05 -0.21513 -9.6356E-05 -0.17646 -7.9037E-05 448.227414691537 450.564236469135 34.91 1.378 34.91 34.578 35.956 0 551 116 9 0 0 0 0.0045207 2 15434 43.798 36.916 1 3.3409 2.7395 0 36661000 8829700 27832000 28468 1569;1864 10781 11072 44529;44530 44530 QESGSEIHVEVK 12 1 0 Unmodified _QESGSEIHVEVK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.3433 2 671.335881 1340.65721 75623.86 0.51467 0.00034552 -0.047897 -3.2155E-05 0.46677 0.00031336 671.336660339882 675.34283181607 34.924 0.8427 34.924 34.604 35.447 0 347 72 7 0 0 0 0.0098911 2 15444 46.796 36.273 1 3.4624 2.7068 0 16264000 3564700 12699000 28469 1569;1864 10781 11072 44531;44532 44531 QESGSEIHVEVK 12 1 0 Unmodified _QESGSEIHVEVK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 450.5645 3 447.893013 1340.65721 90453.95 0.20989 9.4009E-05 -0.1599 -7.1618E-05 0.049991 2.2391E-05 447.892788855535 450.56427221656 34.855 1.2236 34.855 34.561 35.785 0 472 101 10 0 0 0 0.0050488 1 14898 38.674 30.161 1 3.2931 2.6751 0 24915000 5571900 19343000 28470 1569;1864 10781 11072 44533 44533 QESGSEIHVEVK 12 1 0 Unmodified _QESGSEIHVEVK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.343 2 671.335881 1340.65721 74466.55 0.70434 0.00047285 -0.29842 -0.00020034 0.40593 0.00027251 671.336381207652 675.342705706802 34.928 0.7677 34.928 34.643 35.411 -3.8147E-06 301 65 7 0 0 0 2.2897E-05 1 15014 102.05 65.462 1 3.5757 2.9524 0 11402000 2810500 8591000 28471 1569;1864 10781 11072 44534 44534 QEVPIIIVFR 10 0 1 Unmodified _QEVPIIIVFR_ 0 0 0 C9J2Y9;B4DHJ3;P30876;B4DR40;C9J4M6;B4DH29 C9J2Y9 C9J2Y9 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.3694 2 607.368798 1212.72304 NaN NaN NaN -0.09829 -5.9698E-05 NaN NaN NaN NaN 118.45 0.30819 118.45 118.24 118.55 0 0 0 0 0.012842 1 77918 62.546 54.128 1 NaN NaN 0 917050 917050 0 28472 975 10782 11073 44535 44535 QEVTCLCPSPDGLHLAVGYEDGSIR 25 0 1 Unmodified _QEVTCLCPSPDGLHLAVGYEDGSIR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 928.4375 3 925.102181 2772.28471 62780.47 1.1043 0.0010216 -0.013391 -1.2388E-05 1.0909 0.0010092 925.438060953297 928.772298415983 115.67 0.4879 115.67 115.46 115.95 -7.6294E-06 155 22 11 0 0 0 0.044953 1 67736 11.003 8.4264 1 1.2815 1.0755 0 25995000 12159000 13836000 28473 1827 10783 11074 44536 44536 QEVTCLCPSPDGLHLAVGYEDGSIR 25 0 1 Unmodified _QEVTCLCPSPDGLHLAVGYEDGSIR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 928.7734 3 925.102181 2772.28471 NaN NaN NaN 0.04645 4.2971E-05 NaN NaN NaN NaN 115.48 0.4647 115.48 115.28 115.74 0 0 0 0 3.9552E-13 1 66703 75.529 69.996 1 NaN NaN 0 12561000 0 12561000 28474 1827 10783 11074 44537 44537 QEYDESGPSIVHR 13 0 1 Unmodified _QEYDESGPSIVHR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.8599 2 758.854969 1515.69539 69289.16 0.47398 0.00035968 -0.2521 -0.0001913 0.22189 0.00016838 758.853848190729 763.85932556969 34.608 0.93528 34.608 34.4 35.335 0 416 80 8 0 0 0 7.7297E-05 2 17235 94.465 94.465 1 1.6148 1.9064 0 249590000 82745000 166850000 28475 1624;1656;2186 10784 11075 44538;44539 44538 QEYDESGPSIVHR 13 0 1 Unmodified _QEYDESGPSIVHR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2403 3 506.239072 1515.69539 83691.25 0.30333 0.00015356 -0.12679 -6.4186E-05 0.17654 8.937E-05 506.239177500561 509.575105944885 34.61 1.116 34.61 34.337 35.453 3.8147E-06 593 96 10 0 0 0 4.4037E-24 2 17289 124.47 119.56 1 1.8621 2.2091 0 674870000 222690000 452180000 28476 1624;1656;2186 10784 11075 44540;44541 44541 QEYDESGPSIVHR 13 0 1 Unmodified _QEYDESGPSIVHR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.8607 2 758.854969 1515.69539 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.221 1 35.221 34.721 35.721 0 0 0 0 0.0043721 1 17688 60.691 43.665 1 28477 1624;1656;2186 10784 11075 44542 44542 QEYDESGPSIVHR 13 0 1 Unmodified _QEYDESGPSIVHR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.8593 2 758.854969 1515.69539 69560.45 0.60681 0.00046048 0.2506 0.00019017 0.8574 0.00065064 758.855191775659 763.859291622297 33.8 0.62062 33.8 33.497 34.117 0 321 48 10 0 0 0 7.4146E-24 2 16864 159.09 147.6 1 1.9091 2.2375 0 736120000 258970000 477150000 28478 1624;1656;2186 10784 11075 44543;44544 44543 QEYDESGPSIVHR 13 0 1 Unmodified _QEYDESGPSIVHR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.2395 3 506.239072 1515.69539 84113.52 0.3811 0.00019293 -0.1653 -8.368E-05 0.2158 0.00010925 506.23956247399 509.575216464982 33.8 0.99635 33.8 33.473 34.469 3.8147E-06 492 74 12 0 0 0 3.7487E-05 2 16930 73.881 73.881 1 1.8751 2.2222 0 1802100000 636790000 1165300000 28479 1624;1656;2186 10784 11075 44545;44546 44546 QEYDESGPSIVHR 13 0 1 Unmodified _QEYDESGPSIVHR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.8601 2 758.854969 1515.69539 68409.45 0.39232 0.00029772 -0.14516 -0.00011016 0.24716 0.00018756 758.853693570995 763.859404323385 39.851 0.94028 39.851 39.631 40.571 0 460 71 10 0 0 0 0.0048366 2 18177 48.004 48.004 1 2.1425 1.8426 0 47726000 14800000 32927000 28480 1624;1656;2186 10784 11075 44547;44548 44547 QEYDESGPSIVHR 13 0 1 Unmodified _QEYDESGPSIVHR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.5756 3 506.239072 1515.69539 82683.09 0.17464 8.8411E-05 0.12685 6.4215E-05 0.30149 0.00015263 506.239861954158 509.575539044923 39.864 1.8039 39.864 39.546 41.35 0 714 140 12 0 0 0 0.00017622 2 18194 50.562 41.833 1 2.3284 2.0264 0 323350000 94518000 228830000 28481 1624;1656;2186 10784 11075 44549;44550 44550 QEYDESGPSIVHR 13 0 1 Unmodified _QEYDESGPSIVHR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.5753 3 506.239072 1515.69539 84198.36 0.16381 8.2929E-05 -0.05183 -2.6238E-05 0.11198 5.6691E-05 506.239497100028 509.575245110508 40.048 1.4843 40.048 39.69 41.175 0 804 122 12 0 0 0 3.9053E-05 3 17760 66.533 66.533 1 2.2965 2.0057 0 177810000 49469000 128340000 28482 1624;1656;2186 10784 11075 44551;44552;44553 44552 QEYDESGPSIVHR 13 0 1 Unmodified _QEYDESGPSIVHR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 Q53GK6;P63261;V9HVZ7 P63261 PS1TP5BP1;ACTB;ACTG1;POTEE;POTEF;POTEI;POTEM;POTEJ;POTEKP;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 758.8555 2 758.854969 1515.69539 68802.75 0.43756 0.00033205 -0.03746 -2.8427E-05 0.4001 0.00030362 758.854940223857 763.8590863907 40.031 1.2877 40.031 39.491 40.779 0 478 106 9 0 0 0 0.048651 1 17769 29.544 29.544 1 2.3093 2.0144 0 31984000 9382400 22601000 28483 1624;1656;2186 10784 11075 44554 44554 QEYEQLIAK 9 1 0 Unmodified _QEYEQLIAK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.296 2 561.295496 1120.57644 NaN NaN NaN 0.063757 3.5786E-05 NaN NaN NaN NaN 61.307 1.5831 61.307 60.923 62.507 0 0 0 0 1.2649E-07 1 31480 126.52 83.308 1 NaN NaN 0 18394000 18394000 0 + 28484 1165 10785 11076 44555 44555 QEYEQLIAK 9 1 0 Unmodified _QEYEQLIAK_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.2946 2 561.295496 1120.57644 NaN NaN NaN 0.074032 4.1554E-05 NaN NaN NaN NaN 62.028 1.2668 62.028 61.588 62.855 0 0 0 0 0.0010468 2 30949 88.294 59.144 1 NaN NaN 0 19362000 19362000 0 + 28485 1165 10785 11076 44556;44557 44556 QEYLNEYEAEK 11 1 0 Unmodified _QEYLNEYEAEK_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;J3QKS7;J3KT85;J3QR61;C0IMW8;J3QKX6 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.326 2 708.319896 1414.62524 73076.08 0.73239 0.00051877 0.099667 7.0596E-05 0.83206 0.00058937 708.319823634224 712.326870717031 54.868 0.50279 54.868 54.633 55.136 3.8147E-06 119 32 5 0 0 0 0.0082379 2 27403 51.162 47.007 1 1.0423 0.86168 0 2326600 1185900 1140600 28486 86 10786 11077 44558;44559 44559 QEYLNEYEAEK 11 1 0 Unmodified _QEYLNEYEAEK_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;J3QKS7;J3KT85;J3QR61;C0IMW8;J3QKX6 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.327 2 708.319896 1414.62524 72916.98 0.48531 0.00034376 0.036892 2.6132E-05 0.5222 0.00036989 708.31978722382 712.326899169285 55.466 0.50206 55.466 55.195 55.697 0 91 26 4 0 0 0 0.0072035 1 27164 53.028 49.011 1 1.0057 0.79926 0 1995300 902230 1093000 28487 86 10786 11077 44560 44560 QEYVDYSESAK 11 1 0 Unmodified _QEYVDYSESAK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8007 2 659.793514 1317.57248 76688.2 0.58244 0.00038429 -0.091983 -6.069E-05 0.49046 0.0003236 659.793166240346 663.800957085704 34.725 0.3212 34.725 34.491 34.812 0 77 25 4 0 0 0 0.00040981 1 17386 80.706 80.706 1 0.80463 0.83859 0 11682000 5341400 6340100 28488 1398 10787 11078 44561 44561 QEYVDYSESAK 11 1 0 Unmodified _QEYVDYSESAK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8013 2 659.793514 1317.57248 76792.86 0.64015 0.00042237 0.011682 7.7076E-06 0.65183 0.00043007 659.7934542296 663.800606450641 33.863 0.318 33.863 33.726 34.044 0 107 26 6 0 0 0 0.00023945 1 17040 91.095 91.095 1 0.81312 0.84967 0 24293000 13340000 10953000 28489 1398 10787 11078 44562 44562 QEYVDYSESAK 11 1 0 Unmodified _QEYVDYSESAK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.8008 2 659.793514 1317.57248 74292.84 0.43912 0.00028973 0.19642 0.0001296 0.63555 0.00041933 659.793697475971 663.80080962334 40.109 0.56188 40.109 39.844 40.406 0 216 43 6 0 0 0 0.020085 1 18462 43.958 41.9 1 0.7362 0.5865 0 6763200 4181700 2581500 28490 1398 10787 11078 44563 44563 QEYVDYSESAK 11 1 0 Unmodified _QEYVDYSESAK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.8 2 659.793514 1317.57248 75243.42 0.36449 0.00024049 0.086635 5.7161E-05 0.45112 0.00029765 659.793523160655 663.800631927797 40.406 0.5458 40.406 40.165 40.711 0 218 45 7 0 0 0 0.0069796 2 18014 53.432 52.171 1 0.7343 0.59856 0 7640400 4511400 3129100 28491 1398 10787 11078 44564;44565 44565 QFAGYSEEVLDVR 13 0 1 Unmodified _QFAGYSEEVLDVR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 761.874 2 756.870088 1511.72562 70737.99 0.61308 0.00046402 -0.025745 -1.9486E-05 0.58734 0.00044454 756.869835827517 761.874132097818 102.86 1.1146 102.86 102.46 103.58 0 303 73 6 0 0 0 0.0013537 2 58300 58.172 58.172 1 1.1634 0.95055 0 14056000 8028300 6027200 28492 1698;436 10788 11079 44566;44567 44566 QFAGYSEEVLDVR 13 0 1 Unmodified _QFAGYSEEVLDVR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.873 2 756.870088 1511.72562 70513.27 0.46048 0.00034852 -0.16694 -0.00012635 0.29354 0.00022217 756.869738162175 761.874015257894 102.72 0.82071 102.72 102.38 103.2 0 287 53 8 0 0 0 0.0016012 2 57391 57.164 57.164 1 1.0852 0.87663 0 11448000 4421700 7026400 28493 1698;436 10788 11079 44568;44569 44568 QFEELTLGEFLK 12 1 0 Unmodified _QFEELTLGEFLK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.3824 2 727.3823 1452.75005 69874.72 0.90087 0.00065527 -0.2064 -0.00015013 0.69447 0.00050515 727.382148914959 731.389060060939 121.35 0.62138 121.35 121.01 121.63 0 180 41 6 0 0 0 2.5884E-08 2 78302 119.53 100.17 1 0.93913 0.92452 0 19766000 9780800 9985200 28494 498 10789 11080 44570;44571 44571 QFEELTLGEFLK 12 1 0 Unmodified _QFEELTLGEFLK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.3878 2 727.3823 1452.75005 NaN NaN NaN -0.18491 -0.0001345 NaN NaN NaN NaN 120.8 0.4481 120.8 120.64 121.09 0 0 0 0 4.1534E-08 1 79805 106.4 88.088 1 NaN NaN 0 13446000 0 13446000 28495 498 10789 11080 44572 44572 QFEELTLGEFLK 12 1 0 Unmodified _QFEELTLGEFLK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 731.39 2 727.3823 1452.75005 70980.26 0.96882 0.0007047 -0.26739 -0.0001945 0.70143 0.00051021 727.382422795643 731.388346097046 133.9 0.64072 133.9 133.54 134.18 0 133 26 9 0 0 0 8.5121E-13 2 81593 132.32 114.01 1 1.291 1.001 0 13832000 6323100 7508800 28496 498 10789 11080 44573;44574 44574 QFEELTLGEFLK 12 1 0 Unmodified _QFEELTLGEFLK_ 0 0 0 B7Z7B9;E7CU85;A0A0B4J1S3;O15392;A3E0Z5;H3BLT4;K7EMW2 B7Z7B9 B7Z7B9 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.3833 2 727.3823 1452.75005 71277.51 1.1727 0.00085303 -0.27754 -0.00020188 0.8952 0.00065115 727.382339684753 731.388728320116 133.61 0.68515 133.61 133.33 134.02 0 132 28 8 0 0 0 0.00045004 2 80429 70.808 63.877 1 1.2117 0.9724 0 18300000 8171900 10128000 28497 498 10789 11080 44575;44576 44575 QFGFIVLTTSAGIMDHEEAR 20 0 1 Oxidation (M) _QFGFIVLTTSAGIM(ox)DHEEAR_ QFGFIVLTTSAGIM(1)DHEEAR QFGFIVLTTSAGIM(41.77)DHEEAR 0 1 0 B2R4W8;P62244;A8K7H3 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.3715 3 746.700166 2237.07867 71199.37 1.1402 0.00085141 0.28114 0.00020993 1.4214 0.0010613 747.369411448464 750.036335337035 108.64 0.89211 108.64 108.23 109.12 0 208 60 7 0 0 0 3.4123E-05 1 67844 41.772 41.772 1 0.78448 0.8089 0 24331000 13046000 11285000 28498 831 10790 11081 44577 44577 661 QFGFIVLTTSAGIMDHEEAR 20 0 1 Unmodified _QFGFIVLTTSAGIMDHEEAR_ 0 0 0 B2R4W8;P62244;A8K7H3 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.7038 3 741.368527 2221.08375 71086.4 1.1405 0.0008455 -0.059666 -4.4235E-05 1.0808 0.00080127 741.703528451857 745.038593573159 128.08 0.49426 128.08 127.83 128.33 0 106 19 9 0 0 0 0.042966 1 77261 7.6626 7.6626 1 1.0144 0.85182 0 4269900 2229100 2040800 28499 831 10790 11082 44578 44578 QFGFIVLTTSAGIMDHEEAR 20 0 1 Unmodified _QFGFIVLTTSAGIMDHEEAR_ 0 0 0 B2R4W8;P62244;A8K7H3 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 745.0396 3 741.368527 2221.08375 71141.43 0.84855 0.00062909 0.094934 7.0381E-05 0.94349 0.00069947 741.70300618551 744.704470546453 127.78 0.52976 127.78 127.56 128.09 -7.6294E-06 87 21 7 0 0 0 2.9019E-05 1 76157 29.842 29.842 1 1.3942 1.2066 0 4345300 1743000 2602300 28500 831 10790 11082 44579 44579 QFGIDGESFELK 12 1 0 Unmodified _QFGIDGESFELK_ 0 0 0 Q9Y2P8 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.3358 2 685.33535 1368.65615 NaN NaN NaN -0.20657 -0.00014157 NaN NaN NaN NaN 112.52 0.41769 112.52 112.29 112.71 0 0 0 0 0.0053738 1 65317 62.271 49.987 1 NaN NaN 0 5086300 5086300 0 28501 2125 10791 11083 44580 44580 QFLPFLQR 8 0 1 Unmodified _QFLPFLQR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.805 2 524.800552 1047.58655 87566.73 0.51212 0.00026876 0.072045 3.7809E-05 0.58417 0.00030657 524.800309644138 529.804577528355 106.93 0.59215 106.93 106.63 107.22 -7.6294E-06 120 44 4 0 0 0 0.021849 1 66369 57.559 57.559 1 1.3112 1.3572 0 5975800 2354400 3621500 28502 618 10792 11084 44581 44581 QFLPFLQR 8 0 1 Unmodified _QFLPFLQR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.8047 2 524.800552 1047.58655 87416.05 0.52996 0.00027812 -0.09888 -5.1892E-05 0.43108 0.00022623 524.800474637899 529.804616992671 106.14 0.55589 106.14 105.9 106.45 0 93 42 4 0 0 0 0.012091 1 67598 68.422 58.007 1 1.8099 1.8098 0 6919000 2133200 4785800 28503 618 10792 11084 44582 44582 QFNTLIPWCLPHTGNR 16 0 1 Unmodified _QFNTLIPWCLPHTGNR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0;K7ENW7 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.9976 3 651.996588 1952.96794 NaN NaN NaN 0.20076 0.0001309 NaN NaN NaN NaN 120.38 0.37353 120.38 120.2 120.57 0 0 0 0 0.024728 1 71489 21.534 17.63 1 NaN NaN 0 671500 671500 0 28504 222 10793 11085 44583 44583 QFSQYIK 7 1 0 Unmodified _QFSQYIK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.2431 2 457.242535 912.470518 89395.47 0.42411 0.00019392 0.34358 0.0001571 0.76769 0.00035102 457.242672387637 461.249605938321 45.362 0.97332 45.362 44.872 45.845 3.8147E-06 391 85 9 0 0 0 0.020099 2 24236 94.401 72.203 1 0.98149 1.12 0 177370000 84382000 92992000 28505 653 10794 11086 44584;44585 44584 QFSQYIK 7 1 0 Unmodified _QFSQYIK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.2424 2 457.242535 912.470518 88826.26 0.49802 0.00022772 0.13386 6.1207E-05 0.63188 0.00028892 457.242483416411 461.24948933774 44.44 1.1455 44.44 44.098 45.244 0 397 96 9 0 0 0 0.033853 1 24136 63.287 39.764 1 0.96463 1.1285 0 296420000 165110000 131310000 28506 653 10794 11086 44586 44586 QFSQYIK 7 1 0 Unmodified _QFSQYIK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 457.2427 2 457.242535 912.470518 89810.94 0.0981 4.4856E-05 0.25086 0.0001147 0.34896 0.00015956 457.242489817923 461.249459144159 52.561 1.4681 52.561 52.17 53.638 0 504 113 8 0 0 0 0.026944 2 25899 83.377 59.853 1 0.94143 0.77281 0 37583000 19221000 18361000 28507 653 10794 11086 44587;44588 44588 QFSSSYLSR 9 0 1 Unmodified _QFSSSYLSR_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.7646 2 537.764363 1073.51417 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.786 1 45.786 45.286 46.286 0 0 0 0 0.016145 1 25167 57.708 34.666 1 + 28508 1165 10795 11087 44589 44589 QFYINVER 8 0 1 Unmodified _QFYINVER_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3KSZ0;E7EQG2;Q14240;J3KTN0;B4DKP9;Q9NZE6;Q96B07;B4DJX6 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.7818 2 534.777274 1067.53999 81473.85 0.5166 0.00027626 -0.86002 -0.00045992 -0.34342 -0.00018365 534.777412925503 539.781357055318 69.631 0.71552 69.631 69.41 70.126 0 268 58 8 0 0 0 0.0089362 2 41497 76.478 76.478 1 1.7951 2.049 0 92468000 34092000 58375000 28509 770 10796 11088 44590;44591 44590 QFYINVER 8 0 1 Unmodified _QFYINVER_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;B4DNH2;J3KSZ0;E7EQG2;Q14240;J3KTN0;B4DKP9;Q9NZE6;Q96B07;B4DJX6 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 539.7815 2 534.777274 1067.53999 83324.21 0.47138 0.00025208 0.15454 8.2646E-05 0.62592 0.00033473 534.777360278979 539.781447694504 81.233 0.61842 81.233 80.922 81.54 0 163 38 8 0 0 0 0.022994 1 43956 56.81 48.47 1 1.3212 1.1054 0 10277000 4696900 5580200 28510 770 10796 11088 44592 44592 QGANINEIR 9 0 1 Unmodified _QGANINEIR_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.7748 2 507.76998 1013.52541 NaN NaN NaN 1.3847 0.0007031 NaN NaN NaN NaN 30.576 0.43299 30.576 30.412 30.845 0 0 0 0 0.011911 1 14941 65.224 44.253 1 NaN NaN 0 16389000 0 16389000 28511 1759 10797 11089 44593 44593 QGANINEIR 9 0 1 Unmodified _QGANINEIR_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.7742 2 507.76998 1013.52541 85569.86 0.55275 0.00028067 0.75386 0.00038279 1.3066 0.00066346 508.27339071143 512.77398823116 29.994 0.60735 29.994 29.774 30.382 0 178 47 6 0 0 0 0.0002685 1 14587 104.06 79.835 1 1.3638 1.4812 0 28263000 11358000 16905000 28512 1759 10797 11089 44594 44594 QGDNCDSIIR 10 0 1 Unmodified _QGDNCDSIIR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;B3KXA9 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.2709 2 589.266944 1176.51934 NaN NaN NaN -0.47779 -0.00028154 NaN NaN NaN NaN 30.38 0.16118 30.38 30.285 30.446 -1.9073E-06 0 0 0 0.0093157 1 14891 64.04 47.5 1 NaN NaN 0 4604300 0 4604300 28513 883 10798 11090 44595 44595 QGEELEVVQK 10 1 0 Unmodified _QGEELEVVQK_ 0 0 0 Q9GZR2;B4E331;B4DJ95 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.8113 2 579.803685 1157.59282 77490.87 0.30048 0.00017422 -0.015375 -8.9143E-06 0.2851 0.0001653 579.803438132556 583.810663249495 47.038 0.47581 47.038 46.899 47.375 0 124 38 4 0 0 0 0.035164 1 22730 40.724 23.484 1 1.4341 1.1455 0 2915600 1230500 1685100 28514 2021 10799 11091 44596 44596 QGGGGGGGSVPGIER 15 0 1 Unmodified _QGGGGGGGSVPGIER_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0 P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8221 2 642.81819 1283.62183 74426.38 1.1277 0.00072494 0.30827 0.00019816 1.436 0.0009231 643.320561612485 647.822179476516 32.174 0.50515 32.174 31.915 32.42 0 204 47 6 0 0 0 5.5264E-07 1 15862 101.39 101.39 1 2.1206 2.2566 0 43158000 14124000 29033000 28515 1599 10800 11092 44597 44597 QGGGGGGGSVPGIER 15 0 1 Unmodified _QGGGGGGGSVPGIER_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0 P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8192 2 642.81819 1283.62183 75695.34 0.80936 0.00052027 -0.029885 -1.9211E-05 0.77947 0.00050106 642.81856138209 647.822164507071 31.376 0.60756 31.376 31.217 31.825 1.9073E-06 215 54 6 0 0 0 1.1323E-07 2 15499 110.38 110.38 1 1.6116 1.8301 0 48678000 17561000 31117000 28516 1599 10800 11092 44598;44599 44599 QGGGGGGGSVPGIER 15 0 1 Unmodified _QGGGGGGGSVPGIER_ 0 0 0 P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0R2T0 P52272 P52272 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.8222 2 642.81819 1283.62183 75974.38 0.45216 0.00029066 0.30733 0.00019756 0.75949 0.00048822 642.81891777879 647.82216415816 36.967 0.85662 36.967 36.458 37.314 0 271 73 6 0 0 0 0.00061263 1 16192 53.754 53.754 1 1.5584 1.3167 0 4723300 2191400 2531900 28517 1599 10800 11092 44600 44600 QGGLGPMNIPLVSDPK 16 1 0 Oxidation (M) _QGGLGPM(ox)NIPLVSDPK_ QGGLGPM(1)NIPLVSDPK QGGLGPM(66.5)NIPLVSDPK 0 1 0 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.9419 2 819.929622 1637.84469 67367.7 0.87469 0.00071719 -0.64896 -0.0005321 0.22573 0.00018508 820.430176677592 823.93676550602 92.322 0.50549 92.322 92.029 92.534 0 124 42 5 0 0 0 7.4006E-05 1 57038 66.498 66.498 1 4.7797 4.7979 0 13726000 5857700 7868600 28518 1690 10801 11093 44601 44601 1509 QGGPTYYIDTNALR 14 0 1 Unmodified _QGGPTYYIDTNALR_ 0 0 0 Q6FI97;Q53FS0;O96019;H7C5S0;C9JQT2 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.8945 2 784.888812 1567.76307 NaN NaN NaN -0.91922 -0.00072148 NaN NaN NaN NaN 84.665 0.29434 84.665 84.47 84.764 0 0 0 0 0.0019105 1 50701 67.519 46.731 1 NaN NaN 0 10764000 0 10764000 28519 1434 10802 11094 44602 44602 QGGPTYYIDTNALR 14 0 1 Unmodified _QGGPTYYIDTNALR_ 0 0 0 Q6FI97;Q53FS0;O96019;H7C5S0;C9JQT2 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.89 2 784.888812 1567.76307 68733.27 0.90117 0.00070732 -0.47937 -0.00037625 0.4218 0.00033107 784.889072811882 789.892414193643 83.697 0.50433 83.697 83.463 83.967 0 120 41 6 0 0 0 0.0013992 1 51235 53.967 43.658 1 0.73671 0.77713 0 23371000 14219000 9152800 28520 1434 10802 11094 44603 44603 QGHEAYVEMAR 11 0 1 Oxidation (M) _QGHEAYVEM(ox)AR_ QGHEAYVEM(1)AR QGHEAYVEM(60.52)AR 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.7947 2 653.795869 1305.57718 NaN NaN NaN -1.0189 -0.00066617 NaN NaN NaN NaN 18.46 0.13511 18.46 18.372 18.507 0 0 0 0 0.0027717 1 5397 60.518 51.542 1 NaN NaN 0 7037700 7037700 0 28521 1942 10803 11095 44604 44604 1782 QGHEAYVEMAR 11 0 1 Oxidation (M) _QGHEAYVEM(ox)AR_ QGHEAYVEM(1)AR QGHEAYVEM(58.59)AR 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.6115 2 653.795869 1305.57718 74327.2 0.49096 0.00032099 -0.66445 -0.00043442 -0.17349 -0.00011343 653.795438110828 658.800038554319 18.368 0.1501 18.368 18.285 18.435 0 10 3 4 0 0 0 0.031758 1 5059 58.592 54.575 1 1.063 1.0597 0 11662000 5306300 6355900 28522 1942 10803 11095 44605 44605 1782 QGNLSSQVPLK 11 1 0 Unmodified _QGNLSSQVPLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.8279 2 585.827495 1169.64044 79913.48 0.30775 0.00018029 0.32347 0.0001895 0.63122 0.00036979 585.827555323848 589.834826530859 49.738 0.32898 49.738 49.553 49.882 -3.8147E-06 74 21 5 0 0 0 0.0096123 1 27447 49.3 49.3 1 0.60837 0.63965 0 30546000 20448000 10098000 28523 1665 10804 11096 44606 44606 QGNLSSQVPLK 11 1 0 Unmodified _QGNLSSQVPLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.8282 2 585.827495 1169.64044 78725.13 0.94283 0.00055233 0.41335 0.00024215 1.3562 0.00079448 585.827856784985 589.834614778236 48.382 0.36886 48.382 48.215 48.583 0 98 25 6 0 0 0 0.0017885 1 27035 64.82 54.589 1 0.73418 0.75946 0 33058000 18290000 14768000 28524 1665 10804 11096 44607 44607 QGNLSSQVPLK 11 1 0 Unmodified _QGNLSSQVPLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.8288 2 585.827495 1169.64044 78318.47 0.53326 0.0003124 0.0044699 2.6186E-06 0.53773 0.00031501 585.827429040754 589.834587397569 57.603 0.48354 57.603 57.307 57.791 0 154 33 7 0 0 0 0.00016292 1 28500 94.409 78.747 1 0.35174 0.28692 0 7845700 5868100 1977600 28525 1665 10804 11096 44608 44608 QGQGQLVTCSGAFK 14 1 0 Unmodified _QGQGQLVTCSGAFK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.8684 2 740.864283 1479.71401 72042.09 0.79146 0.00058637 0.65217 0.00048317 1.4436 0.0010695 740.864559057447 744.871411948984 51.67 0.6992 51.67 51.403 52.102 0 218 58 5 0 0 0 0.0016747 1 28877 51.998 51.998 1 0.64008 0.62776 0 22672000 12327000 10345000 28526 1770 10805 11097 44609 44609 QGQGQLVTCSGAFK 14 1 0 Unmodified _QGQGQLVTCSGAFK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.8658 2 740.864283 1479.71401 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.445 1 51.445 50.945 51.945 0 0 0 0 0.0028371 1 28463 59.198 43.933 1 28527 1770 10805 11097 44610 44610 QGQGQLVTCSGAFK 14 1 0 Unmodified _QGQGQLVTCSGAFK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8725 2 740.864283 1479.71401 70042.04 0.78785 0.00058369 0.051357 3.8048E-05 0.83921 0.00062174 740.864339558923 744.871672034742 50.535 0.41864 50.535 50.26 50.678 0 175 38 6 0 0 0 3.2055E-09 3 28513 113.63 105.41 1 0.67311 0.72042 0 37005000 22217000 14787000 28528 1770 10805 11097 44611;44612;44613 44613 QGQGQLVTCSGAFK 14 1 0 Unmodified _QGQGQLVTCSGAFK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.8721 2 740.864283 1479.71401 70557.9 0.56864 0.00042128 0.15095 0.00011184 0.71959 0.00053312 740.864563564624 744.871494866712 59.72 0.68343 59.72 59.437 60.121 0 271 47 10 0 0 0 2.0984E-06 1 30475 106.49 106.49 1 1.2686 1.0093 0 19448000 8752800 10695000 28529 1770 10805 11097 44614 44614 QGQGQLVTCSGAFK 14 1 0 Unmodified _QGQGQLVTCSGAFK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.8723 2 740.864283 1479.71401 69913.76 0.57573 0.00042653 -0.21109 -0.00015639 0.36463 0.00027014 740.864386590628 744.871395797783 60.176 0.66026 60.176 59.84 60.5 -3.8147E-06 237 47 8 0 0 0 2.446E-10 2 30052 124.42 117.04 1 1.247 0.99781 0 21439000 9958000 11481000 28530 1770 10805 11097 44615;44616 44616 QGQIITCPAVCNFQTGEYVVVHDNK 25 1 0 Unmodified _QGQIITCPAVCNFQTGEYVVVHDNK_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 960.1284 3 959.793459 2876.35855 NaN NaN NaN 0.32356 0.00031055 NaN NaN NaN NaN 96.342 0.40794 96.342 96.15 96.558 0 0 0 0 2.4529E-09 2 60098 59.429 53.587 1 NaN NaN 0 10349000 10349000 0 28531 2042 10806 11098 44617;44618 44618 QGQIITCPAVCNFQTGEYVVVHDNK 25 1 0 Unmodified _QGQIITCPAVCNFQTGEYVVVHDNK_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 960.1284 3 959.793459 2876.35855 61207.71 0.31338 0.00030078 -0.35843 -0.00034402 -0.045047 -4.3236E-05 960.127704278864 962.799004132988 109.98 0.56227 109.98 109.64 110.21 -7.6294E-06 213 29 13 0 0 0 9.3243E-11 2 63413 61.801 61.801 1 1.2973 1.0501 0 23369000 9844900 13524000 28532 2042 10806 11098 44619;44620 44620 QGQIITCPAVCNFQTGEYVVVHDNK 25 1 0 Unmodified _QGQIITCPAVCNFQTGEYVVVHDNK_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 962.7993 3 959.793459 2876.35855 60701.5 0.38847 0.00037285 -0.40812 -0.00039171 -0.019651 -1.8861E-05 960.127710060807 962.798890979238 109.82 0.51061 109.82 109.57 110.08 0 212 26 11 0 0 0 9.483E-13 2 62406 72.899 70.314 1 1.2028 0.97115 0 23471000 9689000 13782000 28533 2042 10806 11098 44621;44622 44622 QGSEHTYESCGDGVPAPQK 19 1 0 Unmodified _QGSEHTYESCGDGVPAPQK_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;K7ELR5;Q8IXW9;K7EQS0;K7EPT1 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.6382 3 682.965571 2045.87488 74907.46 0.40901 0.00027934 -0.064143 -4.3807E-05 0.34487 0.00023553 682.965398094885 685.637030676478 30.829 0.34046 30.829 30.648 30.989 -1.9073E-06 73 17 6 0 0 0 0.018295 1 12368 13.037 12.348 1 1.2538 1.0325 0 1843900 729240 1114700 28534 260 10807 11099 44623 44623 QGSITSPQANEQSVTPQR 18 0 1 Unmodified _QGSITSPQANEQSVTPQR_ 0 0 0 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 964.4788 2 964.477042 1926.93953 64078.88 0.10071 9.7135E-05 0.60384 0.00058239 0.70456 0.00067953 964.478271653163 969.98333383254 40.078 0.30957 40.078 39.869 40.178 0 80 24 5 0 0 0 0.0070764 1 20865 31.827 31.827 1 1.182 1.2142 0 6436100 3202100 3234000 28535 619 10808 11100 44624 44624 QGSITSPQANEQSVTPQR 18 0 1 Unmodified _QGSITSPQANEQSVTPQR_ 0 0 0 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 964.9782 2 964.477042 1926.93953 63735.09 0.31369 0.00030255 0.30174 0.00029103 0.61544 0.00059358 964.978643632443 969.983332296949 39.131 0.2841 39.131 38.947 39.231 0 62 22 4 0 0 0 0.00067517 1 20613 42.209 42.209 1 0.98894 0.99184 0 9181600 4248300 4933300 28536 619 10808 11100 44625 44625 QGTGLQGQAVFK 12 1 0 Unmodified _QGTGLQGQAVFK_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.836 2 617.332944 1232.65134 80676.2 0.61598 0.00038026 0.58116 0.00035877 1.1971 0.00073903 617.332504711839 621.340430668391 50.77 0.54628 50.77 50.554 51.1 0 132 45 4 0 0 0 0.013423 1 28719 44.309 44.309 1 1.8088 1.8516 0 17495000 6770900 10724000 28537 1012 10809 11101 44626 44626 QGTGLQGQAVFK 12 1 0 Unmodified _QGTGLQGQAVFK_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.3406 2 617.332944 1232.65134 79602.15 0.32958 0.00020346 1.2574 0.00077625 1.587 0.00097971 617.332975198545 621.340416870711 59.972 0.50175 59.972 59.744 60.246 0 115 30 6 0 0 0 0.005312 1 30621 51.268 37.061 1 1.5977 1.2423 0 3652300 1569400 2082800 28538 1012 10809 11101 44627 44627 QGTGLQGQAVFK 12 1 0 Unmodified _QGTGLQGQAVFK_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.3403 2 617.332944 1232.65134 88034.8 0.39697 0.00024506 1.027 0.00063402 1.424 0.00087908 617.332641880045 621.340635707047 60.358 0.4236 60.358 60.197 60.621 0 92 31 5 0 0 0 0.049321 1 30160 32.751 32.751 1 1.8349 1.4872 0 2688000 883740 1804300 28539 1012 10809 11101 44628 44628 QGTPLIAFSLLPHEQK 16 1 0 Unmodified _QGTPLIAFSLLPHEQK_ 0 0 0 Q2NL82;I3L4E8 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.665 3 593.664833 1777.97267 78547.48 0.81191 0.000482 -0.61484 -0.00036501 0.19707 0.00011699 593.664440520599 596.33625620443 122.47 0.44035 122.47 122.25 122.69 -7.6294E-06 112 22 7 0 0 0 0.0075921 2 72996 26.412 26.412 1 0.63799 0.50466 0 5070400 3369600 1700800 28540 1776 10810 11102 44629;44630 44630 QGTPLIAFSLLPHEQK 16 1 0 Unmodified _QGTPLIAFSLLPHEQK_ 0 0 0 Q2NL82;I3L4E8 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.664 3 593.664833 1777.97267 82263.02 0.88677 0.00052644 -0.6693 -0.00039734 0.21747 0.0001291 593.664447670447 596.336288188546 122.17 0.47308 122.17 121.99 122.46 0 89 24 6 0 0 0 0.0079453 2 71917 25.846 25.846 1 0.58533 0.47708 0 7613000 4845100 2767900 28541 1776 10810 11102 44631;44632 44632 QGTQYTFSSIER 12 0 1 Unmodified _QGTQYTFSSIER_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.8427 2 708.84133 1415.66811 73130.09 0.67353 0.00047742 0.21171 0.00015007 0.88524 0.00062749 708.841259421893 713.84576736244 63.012 0.67396 63.012 62.68 63.353 3.8147E-06 331 65 7 0 0 0 0.0029982 1 36061 57.164 40.326 1 0.67623 0.75077 0 70243000 44631000 25612000 28542 167 10811 11103 44633 44633 QGTQYTFSSIER 12 0 1 Unmodified _QGTQYTFSSIER_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.8435 2 708.84133 1415.66811 73117.66 0.59643 0.00042277 0.35871 0.00025427 0.95514 0.00067704 708.841452895021 713.845758226467 61.876 0.88826 61.876 61.439 62.327 0 396 82 7 0 0 0 0.00021096 1 36140 80.979 63.115 1 0.66099 0.76415 0 56333000 32514000 23818000 28543 167 10811 11103 44634 44634 QGTQYTFSSIER 12 0 1 Unmodified _QGTQYTFSSIER_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.8415 2 708.84133 1415.66811 73375.38 0.7045 0.00049938 0.083035 5.8859E-05 0.78754 0.00055824 708.841005897921 713.846002780165 73.265 0.79829 73.265 72.887 73.685 0 326 56 7 0 0 0 0.026785 1 38732 36.447 33.102 1 0.86217 0.70304 0 15321000 7952500 7368400 28544 167 10811 11103 44635 44635 QGTQYTFSSIER 12 0 1 Unmodified _QGTQYTFSSIER_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.8417 2 708.84133 1415.66811 72301.53 0.55172 0.00039109 0.25506 0.00018079 0.80678 0.00057188 708.841182843903 713.846099926339 73.82 0.77562 73.82 73.369 74.144 0 311 54 7 0 0 0 0.0002282 1 38288 84.479 67.808 1 0.85434 0.70428 0 14308000 7181700 7126400 28545 167 10811 11103 44636 44636 QGTQYTFSSIEREEYGK 17 1 1 Unmodified _QGTQYTFSSIEREEYGK_ 0 0 1 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.3174 3 674.98496 2021.93305 75186.18 0.32307 0.00021807 0.22267 0.0001503 0.54574 0.00036837 675.31840456624 680.993165744179 66.426 0.73719 66.426 66.11 66.847 0 270 59 6 0 0 0 5.9931E-05 2 38164 58.159 54.768 1 0.63692 0.72289 0 24043000 13906000 10138000 28546 167 10812 11104 44637;44638 44637 QGTQYTFSSIEREEYGK 17 1 1 Unmodified _QGTQYTFSSIEREEYGK_ 0 0 1 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3192 3 674.98496 2021.93305 74944.07 0.39717 0.00026808 -0.094339 -6.3677E-05 0.30283 0.00020441 674.98511543895 680.992693344227 64.867 0.74818 64.867 64.614 65.362 0 284 61 7 0 0 0 4.0289E-13 2 38235 98.227 93.422 1 0.65924 0.76281 0 32985000 18894000 14091000 28547 167 10812 11104 44639;44640 44639 QGTQYTFSSIEREEYGK 17 1 1 Unmodified _QGTQYTFSSIEREEYGK_ 0 0 1 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.9855 3 674.98496 2021.93305 72320.45 0.45454 0.00030681 0.090595 6.115E-05 0.54514 0.00036796 675.319229669292 680.992522731086 76.975 0.8805 76.975 76.585 77.465 0 360 57 11 0 0 0 0.00021918 2 40985 46.663 43.002 1 0.93177 0.82515 0 47875000 26119000 21755000 28548 167 10812 11104 44641;44642 44641 QGTQYTFSSIEREEYGK 17 1 1 Unmodified _QGTQYTFSSIEREEYGK_ 0 0 1 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.9929 3 674.98496 2021.93305 73080.63 0.56509 0.00038143 0.0057363 3.8719E-06 0.57083 0.0003853 675.319248526819 680.992460034296 77.289 0.84877 77.289 76.922 77.771 0 386 55 11 0 0 0 3.7729E-18 2 40486 125.98 125.98 1 0.91242 0.7768 0 40832000 22041000 18791000 28549 167 10812 11104 44643;44644 44644 QGVDADINGLR 11 0 1 Unmodified _QGVDADINGLR_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.2991 2 579.299101 1156.58365 NaN NaN NaN 0.056425 3.2687E-05 NaN NaN NaN NaN 57.215 1.0053 57.215 56.886 57.891 0 0 0 0 7.6592E-12 2 32185 123.86 97.167 1 NaN NaN 0 91295000 91295000 0 + 28550 1165 10813 11105 44645;44646 44645 QGVDADINGLR 11 0 1 Unmodified _QGVDADINGLR_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.2991 2 579.299101 1156.58365 NaN NaN NaN 0.27205 0.0001576 NaN NaN NaN NaN 56.418 1.1229 56.418 55.934 57.057 0 0 0 0 6.5429E-08 1 32312 109.29 83.891 1 NaN NaN 0 85868000 85868000 0 + 28551 1165 10813 11105 44647 44647 QGVDADINGLR 11 0 1 Unmodified _QGVDADINGLR_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.3 2 579.299101 1156.58365 NaN NaN NaN -0.06717 -3.8912E-05 NaN NaN NaN NaN 66.68 1.2788 66.68 66.141 67.42 0 0 0 0 0.0088996 1 34432 60.518 45.852 1 NaN NaN 0 26427000 26427000 0 + 28552 1165 10813 11105 44648 44648 QGVDADINGLR 11 0 1 Unmodified _QGVDADINGLR_ 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.2993 2 579.299101 1156.58365 NaN NaN NaN 0.43475 0.00025185 NaN NaN NaN NaN 67.242 1.3874 67.242 66.687 68.075 7.6294E-06 0 0 0 0.051684 1 33975 43.77 33.539 1 NaN NaN 0 20397000 20397000 0 + 28553 1165 10813 11105 44649 44649 QGVQVQVSTSNISSLEGAR 19 0 1 Unmodified _QGVQVQVSTSNISSLEGAR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.5108 2 980.508342 1959.00213 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.483 1 85.483 84.983 85.983 0 0 0 0 7.6892E-10 1 51368 123.02 74.735 1 28554 587 10814 11106 44650 44650 QGYVIYR 7 0 1 Unmodified _QGYVIYR_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 449.7428 2 449.742702 897.470852 88908.58 0.4297 0.00019325 0.080993 3.6426E-05 0.51069 0.00022968 449.742675089062 454.746805324159 44.68 0.90894 44.68 44.149 45.058 3.8147E-06 464 81 7 0 0 0 0.026656 1 23786 75.311 49.202 1 0.83825 0.96133 0 135550000 75604000 59941000 28555 121 10815 11107 44651 44651 QGYVIYR 7 0 1 Unmodified _QGYVIYR_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.7438 2 449.742702 897.470852 88985.73 1.2416 0.0005584 -0.50491 -0.00022708 0.7367 0.00033132 449.742407950794 454.746518667351 43.905 0.8261 43.905 43.383 44.209 0 311 67 7 0 0 0 0.018449 1 23839 96.048 57.677 1 0.82617 0.9497 0 200120000 110340000 89781000 28556 121 10815 11107 44652 44652 QGYVLSSIEGR 11 0 1 Unmodified _QGYVLSSIEGR_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.8176 2 604.817127 1207.6197 76817.8 0.56803 0.00034356 -0.1978 -0.00011963 0.37023 0.00022392 604.816875143836 609.821179356905 68.212 0.47633 68.212 67.968 68.444 0 118 36 5 0 0 0 0.0079245 1 40505 51.727 34.496 1 1.1981 1.2 0 18684000 8923100 9761200 28557 600 10816 11108 44653 44653 QGYVLSSIEGR 11 0 1 Unmodified _QGYVLSSIEGR_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 604.817 2 604.817127 1207.6197 77431.2 0.4271 0.00025831 0.27063 0.00016368 0.69773 0.000422 604.817173803473 609.821180882334 79.513 0.76601 79.513 79.056 79.822 7.6294E-06 169 47 6 0 0 0 0.030974 2 42879 38.402 29.54 1 1.2181 1.0228 0 4260200 1773900 2486300 28558 600 10816 11108 44654;44655 44655 QGYVLSSIEGR 11 0 1 Unmodified _QGYVLSSIEGR_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.8173 2 604.817127 1207.6197 77623.48 0.39217 0.00023719 0.28164 0.00017034 0.67381 0.00040753 604.817200212433 609.821291636087 79.784 0.61481 79.784 79.445 80.06 0 143 38 6 0 0 0 0.0040353 2 42167 58.743 48.962 1 1.3337 1.1781 0 3671800 1648800 2023000 28559 600 10816 11108 44656;44657 44657 QHFPATPLLDYALEVEK 17 1 0 Unmodified _QHFPATPLLDYALEVEK_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;Q8N9C4 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.354 3 657.678919 1970.01493 NaN NaN NaN 1.7916 0.0011783 NaN NaN NaN NaN 117.12 0.30415 117.12 116.98 117.28 0 0 0 0 0.007941 1 76739 38.227 26.312 1 NaN NaN 0 3927200 0 3927200 28560 89 10817 11109 44658 44658 QIAEEDFYEK 10 1 0 Unmodified _QIAEEDFYEK_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3015 2 636.29315 1270.57175 80269.6 0.28534 0.00018156 0.43194 0.00027484 0.71728 0.0004564 636.293351045643 640.300658034152 63.278 0.34181 63.278 63.111 63.453 0 78 29 4 0 0 0 0.04246 1 32526 37.789 30.638 1 0.75817 0.63586 0 1623500 885710 737760 28561 560 10818 11110 44659 44659 QIAEEDFYEK 10 1 0 Unmodified _QIAEEDFYEK_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.2933 2 636.29315 1270.57175 80599.03 0.35004 0.00022273 0.27954 0.00017787 0.62957 0.00040059 636.29337932887 640.300401636929 63.866 0.42942 63.866 63.705 64.135 0 72 35 4 0 0 0 0.040524 1 32192 38.567 36.169 1 0.73601 0.61102 0 1571400 790600 780780 28562 560 10818 11110 44660 44660 QIALGTSK 8 1 0 Unmodified _QIALGTSK_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 409.2425 2 409.242535 816.470518 93388.05 0.05219 2.1358E-05 0.72735 0.00029766 0.77954 0.00031902 409.242698515492 413.249834052531 28.393 0.57152 28.393 28.17 28.742 0 124 36 5 0 0 0 0.011794 1 13415 69.105 36.988 1 1.0564 1.1403 0 34708000 17864000 16844000 28563 1470 10819 11111 44661 44661 QICPSLAGFQFTQWDSETHNESVSALVDK 29 1 0 Unmodified _QICPSLAGFQFTQWDSETHNESVSALVDK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1099.1859 3 1098.85058 3293.52991 60082.13 0.15066 0.00016555 0.71944 0.00079056 0.87011 0.00095612 1099.18576610211 1101.85578561422 117.51 0.39915 117.51 117.33 117.73 0 121 23 10 0 0 0 3.1503E-05 2 77130 36.231 36.231 1 0.79701 0.79629 0 15194000 7648100 7546000 28564 740 10820 11112 44662;44663 44663 QICPSLAGFQFTQWDSETHNESVSALVDK 29 1 0 Unmodified _QICPSLAGFQFTQWDSETHNESVSALVDK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1102.1896 3 1098.85058 3293.52991 58472.25 0.14032 0.00015419 -0.3211 -0.00035284 -0.18079 -0.00019866 1099.51964595901 1102.18995313528 129.92 0.50507 129.92 129.72 130.22 0 223 23 15 0 0 0 6.439E-07 2 78669 40.92 40.92 1 1.5509 1.265 0 32529000 12380000 20149000 28565 740 10820 11112 44664;44665 44664 QICPSLAGFQFTQWDSETHNESVSALVDK 29 1 0 Unmodified _QICPSLAGFQFTQWDSETHNESVSALVDK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1099.186 3 1098.85058 3293.52991 57885.25 0.48154 0.00052914 -0.093855 -0.00010313 0.38768 0.00042601 1099.18543152451 1101.85608271212 129.79 0.60683 129.79 129.57 130.18 0 149 21 14 0 0 0 3.4508E-23 2 77672 96.748 96.748 1 1.594 1.3168 0 31649000 12668000 18981000 28566 740 10820 11112 44666;44667 44667 QIDAPGDPFPLNPR 14 0 1 Unmodified _QIDAPGDPFPLNPR_ 0 0 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.897 2 768.893897 1535.77324 72193.15 0.83746 0.00064392 0.0017082 1.3135E-06 0.83917 0.00064523 769.395882904898 773.898056456308 95.794 0.44117 95.794 95.549 95.99 7.6294E-06 105 38 4 0 0 0 0.0017919 2 58313 51.162 51.162 1 0.69617 0.70233 0 7762300 4155500 3606800 28567 1776 10821 11113 44668;44669 44668 QIDQFLVVAR 10 0 1 Unmodified _QIDQFLVVAR_ 0 0 0 A0A024R534;O94776;E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8;E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q86TR6 A0A024R534;E7EQY4;E7ESY4 A0A024R534 MTA2;MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.8406 2 594.840405 1187.66626 78621.37 0.74723 0.00044449 0.78251 0.00046547 1.5297 0.00090995 594.840807390767 599.84498585753 94.474 1.3115 94.474 94.052 95.364 0 422 114 6 0 0 0 4.5577E-08 1 57370 116.73 78.998 1 1.0066 1.0851 0 48016000 22949000 25067000 28568 168;1223;1221 10822 11114 44670 44670 QIDQFLVVAR 10 0 1 Unmodified _QIDQFLVVAR_ 0 0 0 A0A024R534;O94776;E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8;E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q86TR6 A0A024R534;E7EQY4;E7ESY4 A0A024R534 MTA2;MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8452 2 594.840405 1187.66626 78425.69 0.67597 0.00040209 0.24822 0.00014765 0.92419 0.00054974 594.840657429189 599.844438685063 93.628 1.0887 93.628 93.132 94.221 0 375 89 6 0 0 0 2.7877E-10 3 58093 136.8 100.24 1 0.96814 1.1128 0 77050000 34060000 42990000 28569 168;1223;1221 10822 11114 44671;44672;44673 44673 QIDQFLVVAR 10 0 1 Unmodified _QIDQFLVVAR_ 0 0 0 A0A024R534;O94776;E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8;E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q86TR6 A0A024R534;E7EQY4;E7ESY4 A0A024R534 MTA2;MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.8452 2 594.840405 1187.66626 77348.13 0.66953 0.00039826 -0.21508 -0.00012794 0.45446 0.00027033 594.840365837664 599.844370084337 107.48 0.98092 107.48 107.22 108.2 7.6294E-06 258 56 6 0 0 0 0.00039656 3 61514 87.639 58.478 1 1.9742 1.6498 0 10376000 3774000 6601900 28570 168;1223;1221 10822 11114 44674;44675;44676 44675 QIDQFLVVAR 10 0 1 Unmodified _QIDQFLVVAR_ 0 0 0 A0A024R534;O94776;E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8;E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q86TR6 A0A024R534;E7EQY4;E7ESY4 A0A024R534 MTA2;MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.8462 2 594.840405 1187.66626 78151.13 0.63525 0.00037787 -0.098933 -5.8849E-05 0.53632 0.00031902 594.840355338418 599.844428985868 107.32 1.2257 107.32 107 108.23 0 311 73 6 0 0 0 0.00097865 2 60491 78.149 53.012 1 1.9289 1.5727 0 9511000 3172900 6338100 28571 168;1223;1221 10822 11114 44677;44678 44678 QIEIQFAQGDRK 12 1 1 Unmodified _QIEIQFAQGDRK_ 0 0 1 Q5JRI1;Q53GD7;A0A0S2Z504;O75494;Q8WXF0 Q5JRI1 Q5JRI1 SRSF10;SRSF12 Serine/arginine-rich splicing factor 10;Serine/arginine-rich splicing factor 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.2634 3 478.256285 1431.74703 88324.14 0.040383 1.9313E-05 0.070471 3.3703E-05 0.11085 5.3016E-05 478.256229351558 484.26373365089 51.063 0.4293 51.063 50.839 51.268 -3.8147E-06 129 34 6 0 0 0 5.1873E-05 1 28924 80.17 80.17 1 0.99445 1.1479 0 30205000 14364000 15841000 28572 574 10823 11115 44679 44679 QIESLETEMEFR 12 0 1 Oxidation (M) _QIESLETEM(ox)EFR_ QIESLETEM(1)EFR QIESLETEM(91.55)EFR 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.354 2 764.353413 1526.69227 69157.62 0.60057 0.00045904 -0.52936 -0.00040462 0.071204 5.4425E-05 764.352801335731 769.357297456512 67.479 0.73508 67.479 67.066 67.802 0 233 59 6 0 0 0 8.3525E-05 1 39962 91.549 91.549 1 1.2209 1.2247 0 17585000 8029200 9555700 28573 1803 10824 11116 44680 44680 1669 QIFNGTFVK 9 1 0 Unmodified _QIFNGTFVK_ 0 0 0 A0A024R814;P18124;A8MUD9;C9JIJ5;C9JZ88 A0A024R814 A0A024R814 RPL7 60S ribosomal protein L7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.2903 2 527.290017 1052.56548 NaN NaN NaN 0.23156 0.0001221 NaN NaN NaN NaN 73.717 1.0764 73.717 72.864 73.941 0 0 0 0 0.027878 1 44073 54.157 36.864 1 NaN NaN 0 65351000 65351000 0 28574 240 10825 11117 44681 44681 QIGASSRPPPNR 12 0 2 Unmodified _QIGASSRPPPNR_ 0 0 1 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;B4DFH8;B4DZ17 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.2338 3 427.233704 1278.67928 91660.91 0.22339 9.5441E-05 0.043896 1.8754E-05 0.26729 0.0001142 427.233702059238 433.905982947577 16.502 0.44735 16.502 16.322 16.769 -1.9073E-06 60 19 4 0 0 0 0.028794 1 3821 31.148 16.272 1 1.4851 1.6103 0 14948000 4321700 10627000 28575 1689 10826 11118 44682 44682 QIGASSRPPPNR 12 0 2 Unmodified _QIGASSRPPPNR_ 0 0 1 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;B4DFH8;B4DZ17 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.906 3 427.233704 1278.67928 91223.69 -0.33533 -0.00014327 -0.099665 -4.258E-05 -0.435 -0.00018585 427.233621200013 433.905891982876 16.483 0.50761 16.483 16.269 16.777 0 112 25 7 0 0 0 0.0072419 1 3613 43.382 28.01 1 1.389 1.3678 0 6474000 2888800 3585200 28576 1689 10826 11118 44683 44683 QIGNVAALPGIVHR 14 0 1 Unmodified _QIGNVAALPGIVHR_ 0 0 0 Q9Y3I0;B4DNG5;B4DXF1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.6205 3 482.284287 1443.83103 89243.46 -0.051513 -2.4844E-05 0.37721 0.00018192 0.3257 0.00015708 482.618681423881 485.620522635769 81.171 0.54205 81.171 80.897 81.439 0 185 46 6 0 0 0 3.1551E-05 1 48296 60.364 52.498 1 1.2183 1.2672 0 21007000 9786700 11220000 28577 2137 10827 11119 44684 44684 QIGNVAALPGIVHR 14 0 1 Unmodified _QIGNVAALPGIVHR_ 0 0 0 Q9Y3I0;B4DNG5;B4DXF1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.6206 3 482.284287 1443.83103 87955.55 0.43368 0.00020916 0.181 8.7295E-05 0.61469 0.00029645 482.284645422839 485.620280463356 79.902 0.52615 79.902 79.657 80.183 7.6294E-06 176 41 6 0 0 0 2.5867E-05 1 48589 81.918 73.814 1 1.1833 1.2682 0 25207000 13457000 11750000 28578 2137 10827 11119 44685 44685 QIGNVAALPGIVHR 14 0 1 Unmodified _QIGNVAALPGIVHR_ 0 0 0 Q9Y3I0;B4DNG5;B4DXF1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.6206 3 482.284287 1443.83103 87673.08 0.22138 0.00010677 0.25081 0.00012096 0.47219 0.00022773 482.284430309947 485.62041408969 92.791 0.48275 92.791 92.588 93.07 0 122 29 7 0 0 0 0.0017595 1 51684 29.638 25.776 1 1.2841 1.0942 0 5523000 2403300 3119800 28579 2137 10827 11119 44686 44686 QIGNVAALPGIVHR 14 0 1 Unmodified _QIGNVAALPGIVHR_ 0 0 0 Q9Y3I0;B4DNG5;B4DXF1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.6199 3 482.284287 1443.83103 87432.37 0.086961 4.194E-05 0.13111 6.3234E-05 0.21807 0.00010517 482.284301757887 485.620346613407 92.524 0.48167 92.524 92.277 92.758 0 116 25 7 0 0 0 0.042997 1 50636 11.439 8.6652 1 1.4124 1.1928 0 4733100 2243300 2489800 28580 2137 10827 11119 44687 44687 QIIQQNPSLLPALLQQIGR 19 0 1 Unmodified _QIIQQNPSLLPALLQQIGR_ 0 0 0 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74 P54727 P54727 RAD23B UV excision repair protein RAD23 homolog B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1066.1255 2 1065.62331 2129.23207 NaN NaN NaN 0.04721 5.0308E-05 NaN NaN NaN NaN 131.58 0.38226 131.58 131.32 131.7 0 0 0 0 2.2001E-09 2 85794 83.314 70.754 1 NaN NaN 0 4952400 4952400 0 28581 1610 10828 11120 44688;44689 44688 QIIQQNPSLLPALLQQIGR 19 0 1 Unmodified _QIIQQNPSLLPALLQQIGR_ 0 0 0 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74 P54727 P54727 RAD23B UV excision repair protein RAD23 homolog B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1070.6277 2 1065.62331 2129.23207 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.51 1 131.51 131.01 132.01 0 0 0 0 0.0042002 1 85834 50.222 41.907 1 28582 1610 10828 11120 44690 44690 QIIQQNPSLLPALLQQIGR 19 0 1 Unmodified _QIIQQNPSLLPALLQQIGR_ 0 0 0 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74 P54727 P54727 RAD23B UV excision repair protein RAD23 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1065.6235 2 1065.62331 2129.23207 62289.33 0.7252 0.00077279 0.032911 3.5071E-05 0.75811 0.00080786 1066.1250101076 1070.6267291197 131.12 0.39536 131.12 130.89 131.29 0 117 29 6 0 0 0 6.1056E-12 2 87627 103.88 103.88 1 0.61654 0.61447 0 8930400 5459400 3471000 28583 1610 10828 11120 44691;44692 44691 QIIVTR 6 0 1 Unmodified _QIIVTR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 365.2338 2 365.234513 728.454474 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.051 1 29.051 28.551 29.551 -1.9073E-06 0 0 0 0.033545 1 13937 80.555 6.1165 1 28584 1854 10829 11121 44693 44693 QILDPAAR 8 0 1 Unmodified _QILDPAAR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.2533 2 442.253434 882.492316 91068.81 0.17282 7.6431E-05 0.23109 0.0001022 0.40391 0.00017863 442.253445525686 447.257590658548 38.506 0.65291 38.506 38.255 38.908 -3.8147E-06 260 55 8 0 0 0 0.039022 1 20193 47.749 27.124 1 1.7539 2.0213 0 225460000 77577000 147880000 28585 1569 10830 11122 44694 44694 QILDPAASVTGSR 13 0 1 Unmodified _QILDPAASVTGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.855 2 657.854241 1313.69393 74440.8 0.43886 0.00028871 0.68852 0.00045294 1.1274 0.00074165 657.854979166913 662.858514552423 69.698 0.64339 69.698 69.304 69.948 0 280 54 8 0 0 0 0.00014499 2 40605 83.182 65.951 1 1.7667 2.0381 0 154290000 58834000 95458000 28586 1569 10831 11123 44695;44696 44696 QILDPAASVTGSR 13 0 1 Unmodified _QILDPAASVTGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.8558 2 657.854241 1313.69393 75060.91 0.77565 0.00051026 0.38584 0.00025383 1.1615 0.00076409 657.854866617107 662.858336022552 68.459 0.58861 68.459 68.188 68.776 0 243 47 8 0 0 0 1.4005E-06 1 40639 110.93 83.19 1 1.7741 2.0392 0 199230000 66454000 132780000 28587 1569 10831 11123 44697 44697 QILDPAASVTGSR 13 0 1 Unmodified _QILDPAASVTGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.8589 2 657.854241 1313.69393 74103.17 0.57321 0.00037709 0.17309 0.00011387 0.7463 0.00049096 657.854577855194 662.858453686154 79.407 1.2086 79.407 78.99 80.199 0 444 73 11 0 0 0 0.00014095 2 42628 82.171 61.301 1 3.3317 2.8687 0 57763000 13227000 44536000 28588 1569 10831 11123 44698;44699 44698 QILDPAASVTGSR 13 0 1 Unmodified _QILDPAASVTGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.8554 2 657.854241 1313.69393 73852.21 0.47883 0.000315 0.34188 0.00022491 0.82071 0.00053991 657.854644966227 662.858531527094 79.686 1.4818 79.686 79.053 80.535 0 413 88 9 0 0 0 0.0022064 2 41986 54.7 34.913 1 3.2788 2.8606 0 51541000 11573000 39968000 28589 1569 10831 11123 44700;44701 44700 QILDSAASLTGSK 13 1 0 Unmodified _QILDSAASLTGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.8562 2 645.848624 1289.6827 75449.6 0.56983 0.00036802 0.14946 9.6527E-05 0.71929 0.00046455 645.84879857742 649.855782347595 79.659 0.60118 79.659 79.333 79.934 0 276 37 9 0 0 0 0.00055246 2 42850 61.435 45.047 1 3.561 2.9492 0 44503000 10073000 34430000 28590 1569 10832 11124 44702;44703 44703 QILDSAASLTGSK 13 1 0 Unmodified _QILDSAASLTGSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.8561 2 645.848624 1289.6827 75832.52 0.48554 0.00031359 0.14073 9.089E-05 0.62627 0.00040448 645.848752785695 649.855819933172 79.927 0.56488 79.927 79.625 80.19 0 237 32 9 0 0 0 0.00055246 2 42181 61.435 43.376 1 3.541 2.9604 0 44106000 9212000 34894000 28591 1569 10832 11124 44704;44705 44704 QILIACSPVSSVR 13 0 1 Unmodified _QILIACSPVSSVR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.4001 2 715.395219 1428.77588 72056.52 0.99254 0.00071005 -0.67881 -0.00048561 0.31373 0.00022444 715.394448847811 720.399020930781 96.917 0.53564 96.917 96.667 97.203 0 141 27 7 0 0 0 0.0035111 1 54348 49.5 49.5 1 1.5312 1.3145 0 6328400 2256400 4072000 28592 1813 10833 11125 44706 44706 QILIACSPVSSVR 13 0 1 Unmodified _QILIACSPVSSVR_ 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.3985 2 715.395219 1428.77588 71534.16 0.49979 0.00035755 -0.55764 -0.00039893 -0.057849 -4.1385E-05 715.394185548534 720.399126721248 96.699 0.62201 96.699 96.433 97.055 0 126 30 7 0 0 0 0.00019093 1 53485 70.942 70.942 1 1.6405 1.3878 0 4700300 1685600 3014700 28593 1813 10833 11125 44707 44707 QIMENAEINNIIK 13 1 0 Oxidation (M) _QIM(ox)ENAEINNIIK_ QIM(1)ENAEINNIIK QIM(118.4)ENAEINNIIK 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.4016 2 773.400698 1544.78684 68370.98 0.91156 0.000705 -0.48026 -0.00037144 0.4313 0.00033357 773.400682203469 777.407607220822 79.608 0.74578 79.608 79.218 79.964 0 445 64 10 0 0 0 3.2744E-09 2 47070 118.4 106.2 1 0.96907 1.1056 0 176680000 89016000 87666000 28594 1471;1679 10834 11126 44708;44709 44709 1210 QIMENAEINNIIK 13 1 0 Oxidation (M) _QIM(ox)ENAEINNIIK_ QIM(1)ENAEINNIIK QIM(123.75)ENAEINNIIK 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.4016 2 773.400698 1544.78684 66955.16 0.4652 0.00035979 -0.084854 -6.5626E-05 0.38035 0.00029416 773.400742434589 777.407763198192 78.514 0.74691 78.514 78.183 78.93 0 481 64 10 0 0 0 7.4188E-10 2 47463 123.75 123.75 1 0.98584 1.1502 0 264910000 131250000 133660000 28595 1471;1679 10834 11126 44710;44711 44711 1210 QIMENAEINNIIK 13 1 0 Oxidation (M) _QIM(ox)ENAEINNIIK_ QIM(1)ENAEINNIIK QIM(69.98)ENAEINNIIK 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.4086 2 773.400698 1544.78684 68083.45 0.83906 0.00064893 -0.29783 -0.00023034 0.54123 0.00041859 773.400721629839 777.407648908453 91.602 1.308 91.602 91.199 92.507 -7.6294E-06 568 81 11 0 0 0 0.0001021 2 50764 69.979 69.979 1 0.87732 0.75522 0 92596000 47876000 44721000 28596 1471;1679 10834 11126 44712;44713 44713 1210 QIMENAEINNIIK 13 1 0 Oxidation (M) _QIM(ox)ENAEINNIIK_ QIM(1)ENAEINNIIK QIM(61.76)ENAEINNIIK 0 1 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 773.4006 2 773.400698 1544.78684 68278.46 0.65507 0.00050663 -0.36593 -0.00028301 0.28913 0.00022362 773.400548896681 777.407746891891 91.458 1.6409 91.458 90.987 92.628 0 574 99 11 0 0 0 0.00022847 2 49839 61.765 61.765 1 0.90478 0.76808 0 70446000 35517000 34928000 28597 1471;1679 10834 11126 44714;44715 44714 1210 QIMENAEINNIIK 13 1 0 Unmodified _QIMENAEINNIIK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.4113 2 765.40324 1528.79193 68674.95 0.69662 0.00053319 0.52181 0.00039939 1.2184 0.00093259 765.403367216077 769.410301939402 106.31 0.67425 106.31 105.97 106.65 7.6294E-06 271 34 12 0 0 0 1.7158E-06 2 60688 110.53 110.53 1 1.522 1.2363 0 27896000 10349000 17547000 28598 1471;1679 10834 11127 44716;44717 44717 QIMENAEINNIIK 13 1 0 Unmodified _QIMENAEINNIIK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 769.4104 2 765.40324 1528.79193 68540.52 0.79729 0.00061025 0.44891 0.0003436 1.2462 0.00095385 765.403389471016 769.4102882062 106.12 0.95732 106.12 105.74 106.7 0 322 58 12 0 0 0 5.3239E-06 2 59646 105.98 105.98 1 1.5408 1.2721 0 31047000 11510000 19537000 28599 1471;1679 10834 11127 44718;44719 44719 QINDIQLSR 9 0 1 Unmodified _QINDIQLSR_ 0 0 0 Q5U0F4;Q53HU7;Q13347 Q5U0F4 Q5U0F4 EIF3I Eukaryotic translation initiation factor 3 subunit I MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.7992 2 543.798737 1085.58292 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.239 1 49.239 48.739 49.739 0 0 0 0 0.046803 1 26998 47.603 7.2512 1 28600 1711 10835 11128 44720 44720 QINLSNIR 8 0 1 Unmodified _QINLSNIR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.2774 2 479.277441 956.540328 88394.84 0.18736 8.9796E-05 0.27816 0.00013332 0.46552 0.00022311 479.277472020341 484.281854858336 56.854 0.60123 56.854 56.537 57.138 3.8147E-06 186 54 5 0 0 0 0.012954 1 32043 66.429 44.748 1 0.99803 1.0276 0 14136000 6212000 7923700 28601 618 10836 11129 44721 44721 QINVSTDDSEVK 12 1 0 Unmodified _QINVSTDDSEVK_ 0 0 0 Q6IAP9;Q5T1M7;Q59EL4;O43172;B2R7V4 Q6IAP9 Q6IAP9 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.8322 2 667.825346 1333.63614 76407.17 0.71826 0.00047967 0.18442 0.00012316 0.90268 0.00060284 667.825570557719 671.832556780858 36.674 0.28588 36.674 36.501 36.787 0 60 20 4 0 0 0 0.00023251 3 18900 85.355 66.26 1 1.0195 1.0262 0 7145700 2850400 4295400 28602 1381 10837 11130 44722;44723;44724 44724 QINWTVLYR 9 0 1 Unmodified _QINWTVLYR_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.8317 2 596.827298 1191.64004 NaN NaN NaN 0.22533 0.00013448 NaN NaN NaN NaN 99.979 1.7083 99.979 99.16 100.87 0 0 0 0 0.00013773 1 61050 96.711 64.49 1 NaN NaN 0 151770000 0 151770000 28603 1140 10838 11131 44725 44725 QINWTVLYR 9 0 1 Unmodified _QINWTVLYR_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 601.832 2 596.827298 1191.64004 77615.15 0.87554 0.00052255 -0.019328 -1.1536E-05 0.85622 0.00051101 596.827420505684 601.831461073504 112.57 2.2612 112.57 112.11 114.37 0 491 110 8 0 0 0 0.00032615 2 65295 102 102 1 1.364 1.1856 0 264050000 112340000 151710000 28604 1140 10838 11131 44726;44727 44727 QINWTVLYR 9 0 1 Unmodified _QINWTVLYR_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.8284 2 596.827298 1191.64004 78380.09 0.69825 0.00041674 0.15179 9.0593E-05 0.85005 0.00050733 596.827540771315 601.831471616619 112.36 1.8066 112.36 112.04 113.85 0 528 91 11 0 0 0 0.00085417 2 64212 93.429 82.719 1 1.3735 1.1998 0 237330000 101440000 135890000 28605 1140 10838 11131 44728;44729 44728 QIPFHDVR 8 0 1 Unmodified _QIPFHDVR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WY29 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 337.8503 3 337.850531 1010.52976 105795.8 -0.0048958 -1.654E-06 0.2745 9.2739E-05 0.2696 9.1085E-05 337.850516557398 341.186698955265 37.914 0.45169 37.914 37.644 38.096 0 144 37 6 0 0 0 0.02328 1 19378 35.872 28.201 1 1.2435 1.3067 0 11581000 4868900 6712000 28606 1689 10839 11132 44730 44730 QIPFHDVR 8 0 1 Unmodified _QIPFHDVR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WY29 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 338.1849 3 337.850531 1010.52976 104244.2 0.4359 0.00014727 -0.1238 -4.1826E-05 0.3121 0.00010544 337.85041888771 341.186567414441 36.498 0.41502 36.498 36.295 36.711 0 111 34 4 0 0 0 0.028586 1 18808 33.263 21.669 1 1.2796 1.4015 0 32001000 13184000 18817000 28607 1689 10839 11132 44731 44731 QIPLQSLDLEFGSGFQPR 18 0 1 Unmodified _QIPLQSLDLEFGSGFQPR_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1016.5303 2 1016.52855 2031.04254 NaN NaN NaN -0.19762 -0.00020089 NaN NaN NaN NaN 124.16 0.259 124.16 124 124.26 0 0 0 0 0.00041536 1 80584 60.628 45.752 1 NaN NaN 0 1865400 1865400 0 28608 1913 10840 11133 44732 44732 QIPLQSLDLEFGSGFQPR 18 0 1 Unmodified _QIPLQSLDLEFGSGFQPR_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1016.5341 2 1016.52855 2031.04254 61944.12 0.56134 0.00057062 -0.24306 -0.00024708 0.31828 0.00032355 1016.52885201603 1021.53205983973 123.73 0.30795 123.73 123.62 123.93 0 64 20 5 0 0 0 2.3681E-05 2 82222 70.412 70.412 1 0.79541 0.81326 0 5116100 2532900 2583300 28609 1913 10840 11133 44733;44734 44734 QISDGEREELNLTANR 16 0 2 Unmodified _QISDGEREELNLTANR_ 0 0 1 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.9761 3 615.641416 1843.90242 75970.89 0.23068 0.00014201 0.41027 0.00025258 0.64095 0.00039459 615.641562916253 622.314033133964 49.208 0.394 49.208 49.044 49.438 3.8147E-06 188 35 6 0 0 0 0.00017458 2 27630 51.591 51.591 1 1.1016 1.2351 0 27299000 11145000 16154000 28610 900 10841 11134 44735;44736 44736 QISDGEREELNLTANR 16 0 2 Unmodified _QISDGEREELNLTANR_ 0 0 1 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.6418 3 615.641416 1843.90242 75946.06 0.32451 0.00019978 0.27355 0.00016841 0.59806 0.00036819 615.641563634569 622.314282404515 58.987 0.58035 58.987 58.689 59.269 0 258 47 8 0 0 0 0.001428 1 30038 38.093 33.922 1 0.89867 0.79514 0 4022300 2133100 1889200 28611 900 10841 11134 44737 44737 QISDGEREELNLTANR 16 0 2 Unmodified _QISDGEREELNLTANR_ 0 0 1 B3KN59;B3KM36;O95816 B3KN59 B3KN59 BAG2 BAG family molecular chaperone regulator 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.6417 3 615.641416 1843.90242 76519.77 0.39824 0.00024517 0.33411 0.00020569 0.73234 0.00045086 615.975835508454 622.31422375895 59.657 0.65837 59.657 59.339 59.998 0 246 49 7 0 0 0 0.010375 2 29784 27.496 27.496 1 0.93556 0.84587 0 3277200 1745200 1531900 28612 900 10841 11134 44738;44739 44739 QISNLQQSISDAEQR 15 0 1 Unmodified _QISNLQQSISDAEQR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 858.9293 2 858.929197 1715.84384 NaN NaN NaN -0.33558 -0.00028824 NaN NaN NaN NaN 53.334 0.25436 53.334 53.189 53.443 3.8147E-06 0 0 0 7.5559E-07 1 29746 96.64 81.961 1 NaN NaN 0 13248000 13248000 0 + 28613 1308;1309 10842 11135 44740 44740 QISNLQQSISDAEQR 15 0 1 Unmodified _QISNLQQSISDAEQR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 859.4314 2 858.929197 1715.84384 NaN NaN NaN -0.46079 -0.00039578 NaN NaN NaN NaN 66.743 1.088 66.743 66.396 67.484 0 0 0 0 1.6256E-83 2 38358 200.93 183.73 1 NaN NaN 0 318840000 318840000 0 + 28614 1308;1309 10842 11135 44741;44742 44741 QISNLQQSISDAEQR 15 0 1 Unmodified _QISNLQQSISDAEQR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.9287 2 858.929197 1715.84384 NaN NaN NaN -0.18394 -0.00015799 NaN NaN NaN NaN 65.709 0.99544 65.709 65.264 66.259 0 0 0 0 1.5599E-152 2 38581 247.13 210.83 1 NaN NaN 0 444780000 444780000 0 + 28615 1308;1309 10842 11135 44743;44744 44743 QISNLQQSISDAEQR 15 0 1 Unmodified _QISNLQQSISDAEQR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.9293 2 858.929197 1715.84384 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.239 1 52.239 51.739 52.739 3.8147E-06 0 0 0 0.0014705 1 29749 64.945 42.412 1 + 28616 1308;1309 10842 11135 44745 44745 QISNLQQSISDAEQR 15 0 1 Unmodified _QISNLQQSISDAEQR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 858.9294 2 858.929197 1715.84384 NaN NaN NaN -0.16091 -0.00013821 NaN NaN NaN NaN 77.232 1.373 77.232 76.881 78.254 0 0 0 0 2.9305E-69 3 41373 186.58 166.38 1 NaN NaN 0 180730000 180730000 0 + 28617 1308;1309 10842 11135 44746;44747;44748 44746 QISNLQQSISDAEQR 15 0 1 Unmodified _QISNLQQSISDAEQR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.9301 2 858.929197 1715.84384 NaN NaN NaN 0.09633 8.274E-05 NaN NaN NaN NaN 114.56 0.62977 114.56 114.22 114.85 0 0 0 0 0.011843 1 66176 49.448 35.678 1 NaN NaN 0 5951700 5951700 0 + 28618 1308;1309 10842 11135 44749 44749 QISNLQQSISDAEQRGENALK 21 1 1 Unmodified _QISNLQQSISDAEQRGENALK_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.3975 3 777.062932 2328.16697 NaN NaN NaN -0.16562 -0.0001287 NaN NaN NaN NaN 106.11 0.42664 106.11 105.88 106.3 0 0 0 0 0.021943 1 60517 30.21 25.772 1 NaN NaN 0 18190000 18190000 0 + 28619 1308;1309 10843 11136 44750 44750 QISQAYEVLSDAK 13 1 0 Unmodified _QISQAYEVLSDAK_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.3801 2 726.372463 1450.73037 72434.68 0.55095 0.00040019 0.061061 4.4353E-05 0.61201 0.00044455 726.372458603605 730.379607477326 76.744 0.52428 76.744 76.478 77.002 0 215 42 7 0 0 0 0.00013946 3 45251 81.799 65.545 1 1.1511 1.1278 0 21511000 9990200 11520000 28620 1535 10844 11137 44751;44752;44753 44752 QISQAYEVLSDAK 13 1 0 Unmodified _QISQAYEVLSDAK_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3794 2 726.372463 1450.73037 71130.16 0.57479 0.00041751 -0.42136 -0.00030606 0.15343 0.00011145 726.372097751884 730.379238415151 75.71 0.61853 75.71 75.469 76.088 0 220 56 7 0 0 0 9.3421E-24 2 45642 158.02 139.41 1 1.1929 1.2407 0 24578000 11038000 13540000 28621 1535 10844 11137 44754;44755 44754 QISQAYEVLSDAK 13 1 0 Unmodified _QISQAYEVLSDAK_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.3735 2 726.372463 1450.73037 70595.05 0.80898 0.00058762 -0.24984 -0.00018148 0.55914 0.00040614 726.372426997431 730.379740764756 88.223 0.91207 88.223 87.72 88.632 0 244 55 7 0 0 0 0.012652 1 48516 39.179 34.881 1 0.74564 0.59898 0 7893000 4500500 3392500 28622 1535 10844 11137 44756 44756 QISQAYEVLSDAK 13 1 0 Unmodified _QISQAYEVLSDAK_ 0 0 0 P31689 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.3804 2 726.372463 1450.73037 70634.05 0.55877 0.00040588 0.15176 0.00011023 0.71053 0.00051611 726.372655103158 730.379855265548 88.26 0.75916 88.26 87.989 88.748 0 170 42 6 0 0 0 0.00028723 1 47776 66.262 50.009 1 0.80454 0.65627 0 7835000 4686500 3148500 28623 1535 10844 11137 44757 44757 QISRPSAAGINLMIGSTR 18 0 2 Oxidation (M) _QISRPSAAGINLM(ox)IGSTR_ QISRPSAAGINLM(1)IGSTR QISRPSAAGINLM(77.7)IGSTR 0 1 1 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.6801 3 630.007153 1886.99963 76891.26 0.83058 0.00052327 -0.54864 -0.00034565 0.28193 0.00017762 630.006683898772 636.67922206547 73.098 0.49536 73.098 72.877 73.372 0 190 40 7 0 0 0 3.2682E-06 1 43824 77.698 77.698 1 1.6883 1.9223 0 38956000 15184000 23771000 28624 1691 10845 11138 44758 44758 1519 QISVGFIGYPNVGK 14 1 0 Unmodified _QISVGFIGYPNVGK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.3336 2 739.903734 1477.79291 NaN NaN NaN 0.63928 0.00047301 NaN NaN NaN NaN 103.11 0.47082 103.11 102.93 103.4 0 0 0 0 0.014556 1 65168 48.998 28.694 1 NaN NaN 0 6365000 0 6365000 28625 1721 10846 11139 44759 44759 QISVGFIGYPNVGK 14 1 0 Unmodified _QISVGFIGYPNVGK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.9041 2 739.903734 1477.79291 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.19 1 103.19 102.69 103.69 -7.6294E-06 0 0 0 0.030827 1 65239 57.532 38.752 1 28626 1721 10846 11139 44760 44760 QISVGFIGYPNVGK 14 1 0 Unmodified _QISVGFIGYPNVGK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 743.9111 2 739.903734 1477.79291 NaN NaN NaN -0.4519 -0.00033436 NaN NaN NaN NaN 115.42 0.56705 115.42 115.11 115.68 -7.6294E-06 0 0 0 0.00023379 1 66739 83.862 68.711 1 NaN NaN 0 6696900 0 6696900 28627 1721 10846 11139 44761 44761 QISVGFIGYPNVGK 14 1 0 Unmodified _QISVGFIGYPNVGK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.9039 2 739.903734 1477.79291 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.47 1 115.47 114.97 115.97 0 0 0 0 0.002715 1 66740 76.143 60.252 1 28628 1721 10846 11139 44762 44762 QITQSALLAEAR 12 0 1 Unmodified _QITQSALLAEAR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8696 2 650.864608 1299.71466 NaN NaN NaN -0.23704 -0.00015428 NaN NaN NaN NaN 70.466 0.67361 70.466 70.143 70.817 0 0 0 0 0.016841 1 40912 52.391 39.764 1 NaN NaN 0 6068400 0 6068400 28629 1665 10847 11140 44763 44763 QITQSALLAEAR 12 0 1 Unmodified _QITQSALLAEAR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.8693 2 650.864608 1299.71466 74541.42 0.64029 0.00041674 0.89024 0.00057943 1.5305 0.00099617 650.86455773138 655.868481060348 81.17 1.0021 81.17 80.621 81.623 0 304 62 7 0 0 0 0.0060504 2 43947 49.5 49.5 1 0.35838 0.30852 0 7413500 5443600 1969800 28630 1665 10847 11140 44764;44765 44765 QITQSALLAEAR 12 0 1 Unmodified _QITQSALLAEAR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.8655 2 650.864608 1299.71466 75586.21 0.7036 0.00045795 1.168 0.00076018 1.8716 0.0012181 650.864531412719 655.868530288283 81.305 0.84737 81.305 80.843 81.691 0 280 49 9 0 0 0 2.0673E-05 2 43239 103.08 103.08 1 0.34826 0.28858 0 7870200 5886200 1984100 28631 1665 10847 11140 44766;44767 44767 QITVNDLPVGR 11 0 1 Unmodified _QITVNDLPVGR_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.3445 2 606.340769 1210.66699 NaN NaN NaN -0.68007 -0.00041235 NaN NaN NaN NaN 77.889 0.59892 77.889 77.577 78.176 0 0 0 0 0.0020167 1 45941 78.655 52.141 1 NaN NaN 0 38890000 0 38890000 28632 1690 10848 11141 44768 44768 QITVNDLPVGR 11 0 1 Unmodified _QITVNDLPVGR_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.3408 2 606.340769 1210.66699 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.956 1 76.956 76.456 77.456 0 0 0 0 0.00056923 1 46497 74.424 36.338 1 28633 1690 10848 11141 44769 44769 QIVGTPVNSEDSDTR 15 0 1 Unmodified _QIVGTPVNSEDSDTR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.3901 2 809.389373 1616.76419 67194.77 0.93637 0.00075789 -0.11753 -9.5126E-05 0.81884 0.00066276 809.389087593243 814.393370897746 41.609 0.53751 41.609 41.342 41.88 0 222 45 7 0 0 0 8.0707E-22 1 21864 140.39 140.39 1 0.95191 0.9758 0 36039000 18114000 17924000 28634 1813 10849 11142 44770 44770 QIVGTPVNSEDSDTR 15 0 1 Unmodified _QIVGTPVNSEDSDTR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.39 2 809.389373 1616.76419 67739.55 0.60011 0.00048572 0.16971 0.00013736 0.76982 0.00062308 809.389408686302 814.393538326083 40.788 0.54676 40.788 40.524 41.071 0 191 39 7 0 0 0 0.00022625 1 21704 73.435 55.571 1 1.0237 1.1299 0 41579000 19887000 21692000 28635 1813 10849 11142 44771 44771 QIVGTPVNSEDSDTR 15 0 1 Unmodified _QIVGTPVNSEDSDTR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.3906 2 809.389373 1616.76419 66355.24 0.36126 0.0002924 0.75865 0.00061404 1.1199 0.00090644 809.389542517435 814.393878808347 47.98 0.76736 47.98 47.638 48.406 0 352 52 12 0 0 0 0.0013373 1 23204 48.044 32.779 1 1.5015 1.2623 0 26918000 12819000 14100000 28636 1813 10849 11142 44772 44772 QIVGTPVNSEDSDTR 15 0 1 Unmodified _QIVGTPVNSEDSDTR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 809.3901 2 809.389373 1616.76419 67016.01 0.29655 0.00024003 0.31318 0.00025349 0.60974 0.00049351 809.389421729418 814.393721672326 48.377 0.87237 48.377 47.97 48.843 3.8147E-06 512 75 10 0 0 0 2.4507E-05 2 22900 87.001 69.137 1 1.3703 1.1953 0 27166000 12038000 15128000 28637 1813 10849 11142 44773;44774 44774 QKEEEEATASERNDADEK 18 2 1 Unmodified _QKEEEEATASERNDADEK_ 0 0 2 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.6425 3 693.64181 2077.9036 71714.75 0.46689 0.00032385 -0.16003 -0.00011101 0.30685 0.00021285 693.641990299464 702.320685188033 15.006 0.335 15.006 14.901 15.236 9.5367E-07 115 27 11 0 0 0 0.0078598 1 2497 30.945 30.945 1 2.0622 2.1364 0 13717000 4711800 9004900 28638 1820 10850 11143 44775 44775 QKEEEEATASERNDADEK 18 2 1 Unmodified _QKEEEEATASERNDADEK_ 0 0 2 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;F8W895 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.4833 4 520.483176 2077.9036 83113.38 0.21659 0.00011273 -0.31693 -0.00016496 -0.10034 -5.2227E-05 520.733792382819 526.992228666445 15 0.26775 15 14.852 15.12 0 77 17 10 0 0 0 0.055803 1 2518 16.924 16.924 1 2.0771 2.1518 0 3995900 1222700 2773300 28639 1820 10850 11143 44776 44776 QKPELLNK 8 2 0 Unmodified _QKPELLNK_ 0 0 1 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.2901 2 485.290017 968.565481 84876.65 -0.0046533 -2.2582E-06 0.30695 0.00014896 0.30229 0.0001467 485.29011775925 493.304287687586 22.963 0.71817 22.963 22.778 23.497 0 111 32 8 0 0 0 0.04238 1 7578 81.119 30.415 1 0.94788 0.80534 0 39623000 19964000 19659000 28640 2148 10851 11144 44777 44777 QKPELLNK 8 2 0 Unmodified _QKPELLNK_ 0 0 1 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.3043 2 485.290017 968.565481 84887.38 -0.0080811 -3.9217E-06 0.041643 2.0209E-05 0.033562 1.6287E-05 485.28998836687 493.304156107811 22.758 0.64102 22.758 22.595 23.236 0 109 25 8 0 0 0 0.039089 2 6957 83.753 40.724 1 0.9549 0.81147 0 29024000 14694000 14330000 28641 2148 10851 11144 44778;44779 44778 QKPQEVPQENGMEDPSISFSK 21 2 0 Oxidation (M) _QKPQEVPQENGM(ox)EDPSISFSK_ QKPQEVPQENGM(1)EDPSISFSK QKPQEVPQENGM(62.32)EDPSISFSK 0 1 1 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.3881 3 797.709278 2390.106 69044.38 0.86774 0.0006922 -0.18801 -0.00014998 0.67973 0.00054223 798.04336720498 803.051663637811 55.78 0.60206 55.78 55.436 56.038 -3.8147E-06 225 45 7 0 0 0 3.9157E-08 2 31267 62.325 62.325 1 0.86288 1.0289 0 20755000 10308000 10447000 28642 785 10852 11145 44780;44781 44780 622 QKPQEVPQENGMEDPSISFSK 21 2 0 Oxidation (M) _QKPQEVPQENGM(ox)EDPSISFSK_ QKPQEVPQENGM(1)EDPSISFSK QKPQEVPQENGM(59.86)EDPSISFSK 0 1 1 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.0459 3 797.709278 2390.106 68304.38 0.99299 0.00079212 -0.17728 -0.00014142 0.81571 0.0006507 798.377759047757 803.386434531448 54.496 0.56543 54.496 54.212 54.777 0 257 46 8 0 0 0 9.8311E-08 2 31134 59.857 59.857 1 1.0074 1.1637 0 31692000 16295000 15398000 28643 785 10852 11145 44782;44783 44783 622 QKPQEVPQENGMEDPSISFSK 21 2 0 Unmodified _QKPQEVPQENGMEDPSISFSK_ 0 0 1 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 798.0559 3 792.37764 2374.11109 68744.03 0.50769 0.00040228 0.79429 0.00062938 1.302 0.0010317 792.711918587712 797.72097089449 79.757 0.44193 79.757 79.57 80.012 0 140 27 7 0 0 0 0.047235 1 42994 15.522 15.522 1 1.2829 1.1229 0 2939900 1247200 1692700 28644 785 10852 11146 44784 44784 QKPQEVPQENGMEDPSISFSK 21 2 0 Unmodified _QKPQEVPQENGMEDPSISFSK_ 0 0 1 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.7119 3 792.37764 2374.11109 69334.05 0.53243 0.00042189 0.40632 0.00032196 0.93876 0.00074385 792.711497706273 798.055457770193 79.949 0.56097 79.949 79.745 80.306 0 130 32 7 0 0 0 0.00047999 3 42285 35.015 32.133 1 1.2343 1.0729 0 2559700 1207600 1352200 28645 785 10852 11146 44785;44786;44787 44785 QLADETLLK 9 1 0 Unmodified _QLADETLLK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.7998 2 515.792589 1029.57063 87492.88 0.16812 8.6713E-05 0.20647 0.0001065 0.37459 0.00019321 516.293386206576 519.800056911814 64.841 0.53501 64.841 64.592 65.127 0 96 47 4 0 0 0 0.0070864 1 37284 62.546 16.12 1 1.4984 1.5153 0 6849600 2756200 4093300 28646 1502 10853 11147 44788 44788 QLADETLLK 9 1 0 Unmodified _QLADETLLK_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 P20700 P20700 LMNB1 Lamin-B1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.7928 2 515.792589 1029.57063 NaN NaN NaN 0.7982 0.0004117 NaN NaN NaN NaN 63.631 0.21349 63.631 63.485 63.698 0 0 0 0 0.018019 1 37423 60.436 6.2792 1 NaN NaN 0 3574400 3574400 0 28647 1502 10853 11147 44789 44789 QLAEEDLAQQR 11 0 1 Unmodified _QLAEEDLAQQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8328 2 650.828223 1299.64189 75834.76 0.68139 0.00044347 0.030701 1.9981E-05 0.7121 0.00046345 650.82815175057 655.832122388046 39.915 0.37971 39.915 39.718 40.097 0 96 30 4 0 0 0 0.00013138 1 20770 95.775 60.264 1 1.2142 1.2187 0 9164100 4299700 4864500 28648 1754 10854 11148 44790 44790 QLAEEDLAQQR 11 0 1 Unmodified _QLAEEDLAQQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.3552 2 650.828223 1299.64189 77024.24 0.5954 0.0003875 0.27802 0.00018094 0.87342 0.00056845 650.828736586451 655.832371417632 45.91 0.3597 45.91 45.742 46.102 -3.8147E-06 106 27 5 0 0 0 0.027828 1 22027 60.102 33.429 1 2.5846 2.243 0 2154900 662490 1492400 28649 1754 10854 11148 44791 44791 QLAEEDLAQQR 11 0 1 Unmodified _QLAEEDLAQQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.8326 2 650.828223 1299.64189 76293.84 0.46515 0.00030274 0.11057 7.1965E-05 0.57573 0.0003747 650.828462517158 655.832358972146 46.164 0.69723 46.164 45.913 46.61 3.8147E-06 123 43 4 0 0 0 0.01237 1 21628 47.894 18.936 1 2.2452 1.9637 0 1301000 457670 843300 28650 1754 10854 11148 44792 44792 QLASGLLLVTGPLVLNR 17 0 1 Unmodified _QLASGLLLVTGPLVLNR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.0433 2 882.540729 1763.0669 65121.48 0.911 0.000804 0.11666 0.00010296 1.0277 0.00090696 882.540822840817 887.544901902281 130.59 1.0251 130.59 130.13 131.15 0 533 66 10 0 0 0 1.876E-127 4 85045 249.28 249.28 1 0.906 1.0065 0 72151000 37205000 34946000 28651 342 10855 11149 44793;44794;44795;44796 44794 QLASGLLLVTGPLVLNR 17 0 1 Unmodified _QLASGLLLVTGPLVLNR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.0428 2 882.540729 1763.0669 65022.58 0.65778 0.00058052 0.31022 0.00027379 0.96801 0.00085431 882.540952473671 887.545140181271 130.05 1.0432 130.05 129.7 130.74 0 557 69 10 0 0 0 2.2833E-81 4 86819 201.95 201.95 1 0.93105 1.0695 0 78248000 40342000 37906000 28652 342 10855 11149 44797;44798;44799;44800 44799 QLDECASAITK 11 1 0 Unmodified _QLDECASAITK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.3073 2 618.300452 1234.58635 76516.63 0.92247 0.00057036 0.090509 5.5962E-05 1.013 0.00062632 618.300402496498 622.307621232118 38.74 0.47878 38.74 38.513 38.992 0 159 39 6 0 0 0 2.9077E-05 2 19903 101.38 85.799 1 0.76039 0.76817 0 27417000 15955000 11462000 28653 2070 10856 11150 44801;44802 44802 QLDECASAITK 11 1 0 Unmodified _QLDECASAITK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3 2 618.300452 1234.58635 NaN NaN NaN 0.14451 8.9352E-05 NaN NaN NaN NaN 37.827 0.33416 37.827 37.637 37.971 0 0 0 0 1.2696E-05 1 19716 104.05 61.179 1 NaN NaN 0 33189000 33189000 0 28654 2070 10856 11150 44803 44803 QLDECASAITK 11 1 0 Unmodified _QLDECASAITK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.3007 2 618.300452 1234.58635 74799.6 0.50357 0.00031136 -0.1912 -0.00011822 0.31237 0.00019314 618.300430676431 622.307510575254 44.448 0.88365 44.447 44.123 45.007 -3.8147E-06 288 63 8 0 0 0 0.00024565 2 21045 90.827 75.676 1 1.7654 1.4053 0 19550000 6664600 12885000 28655 2070 10856 11150 44804;44805 44804 QLDECASAITK 11 1 0 Unmodified _QLDECASAITK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.3074 2 618.300452 1234.58635 74818.89 0.68498 0.00042353 -0.57244 -0.00035394 0.11255 6.9587E-05 618.300182573069 622.307281627953 44.607 0.82877 44.607 44.324 45.153 0 304 58 8 0 0 0 0.00024565 2 20592 90.827 78.78 1 1.8805 1.5114 0 16856000 5645400 11211000 28656 2070 10856 11150 44806;44807 44806 QLDSIVGER 9 0 1 Unmodified _QLDSIVGER_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;F8W0C6 B2R853;CON__P04259;CON__P13647 CON__P13647 KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.7722 2 508.772188 1015.52982 NaN NaN NaN -0.038038 -1.9353E-05 NaN NaN NaN NaN 48.58 0.71506 48.58 48.189 48.904 0 0 0 0 0.0076946 2 26574 69.716 20.126 1 NaN NaN 0 34312000 34312000 0 + 28657 1162;859;1154 10857 11151 44808;44809 44808 QLDSIVGER 9 0 1 Unmodified _QLDSIVGER_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;F8W0C6 B2R853;CON__P04259;CON__P13647 CON__P13647 KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.7737 2 508.772188 1015.52982 NaN NaN NaN -0.14951 -7.6067E-05 NaN NaN NaN NaN 47.467 0.53934 47.467 47.179 47.718 0 0 0 0 0.0027333 2 26304 79.906 32.839 1 NaN NaN 0 54966000 54966000 0 + 28658 1162;859;1154 10857 11151 44810;44811 44811 QLDSIVGER 9 0 1 Unmodified _QLDSIVGER_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;F8W0C6 B2R853;CON__P04259;CON__P13647 CON__P13647 KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 508.7719 2 508.772188 1015.52982 NaN NaN NaN -0.18394 -9.3584E-05 NaN NaN NaN NaN 55.885 0.77857 55.885 55.537 56.316 0 0 0 0 0.04166 1 27354 49.715 20.566 1 NaN NaN 0 6671300 6671300 0 + 28659 1162;859;1154 10857 11151 44812 44812 QLEEAEEEAQR 11 0 1 Unmodified _QLEEAEEEAQR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3121 2 666.30732 1330.60009 76348.66 0.73866 0.00049217 0.95451 0.00063599 1.6932 0.0011282 666.809964073132 671.311548589689 24.006 0.24047 24.006 23.902 24.143 -1.9073E-06 25 11 4 0 0 0 7.8874E-05 1 9819 98.048 79.737 1 1.8656 1.855 0 8481600 2805000 5676600 28660 81 10858 11152 44813 44813 QLEEEQAVRPK 11 1 1 Unmodified _QLEEEQAVRPK_ 0 0 1 P14635;E9PC90;H1UBN2 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8547 2 663.854241 1325.69393 74285.7 0.51503 0.0003419 -0.14909 -9.8977E-05 0.36593 0.00024293 663.854232605448 672.865463283035 22.599 0.32571 22.599 22.46 22.786 0 78 19 6 0 0 0 5.7336E-12 2 8676 145.9 128.01 1 0.64714 0.69567 0 13944000 7227400 6717000 28661 1483 10859 11153 44814;44815 44815 QLEEEQAVRPK 11 1 1 Unmodified _QLEEEQAVRPK_ 0 0 1 P14635;E9PC90;H1UBN2 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.9052 3 442.905253 1325.69393 91083.14 -0.06427 -2.8466E-05 -0.070894 -3.1399E-05 -0.13516 -5.9865E-05 442.905223362653 448.91261997829 22.648 0.32571 22.648 22.46 22.786 0 97 20 7 0 0 0 0.024137 1 8719 26.012 22.69 1 0.59908 0.66058 0 18192000 10989000 7203000 28662 1483 10859 11153 44816 44816 QLEEEQAVRPK 11 1 1 Unmodified _QLEEEQAVRPK_ 0 0 1 P14635;E9PC90;H1UBN2 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.9052 3 442.905253 1325.69393 90519.16 -0.052637 -2.3313E-05 -0.21572 -9.5544E-05 -0.26836 -0.00011886 442.905026425057 448.912636397514 22.303 0.46392 22.303 21.972 22.436 0 65 21 6 0 0 0 0.00017474 1 8310 71.524 62.57 1 0.68317 0.78543 0 26006000 13442000 12564000 28663 1483 10859 11153 44817 44817 QLEEEQAVRPK 11 1 1 Unmodified _QLEEEQAVRPK_ 0 0 1 P14635;E9PC90;H1UBN2 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.866 2 663.854241 1325.69393 72235.78 0.46659 0.00030975 -0.24846 -0.00016494 0.21814 0.00014481 663.854017168044 672.865454129997 22.293 0.30189 22.293 22.158 22.46 0 58 13 7 0 0 0 5.2869E-79 2 8331 230.06 209.19 1 0.67315 0.77504 0 27449000 15247000 12203000 28664 1483 10859 11153 44818;44819 44818 QLEEEQAVRPK 11 1 1 Unmodified _QLEEEQAVRPK_ 0 0 1 P14635;E9PC90;H1UBN2 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.8658 2 663.854241 1325.69393 72847.13 0.52589 0.00034911 -0.076864 -5.1027E-05 0.44902 0.00029808 663.854102019645 672.865379217606 25.032 0.54904 25.032 24.732 25.281 -1.9073E-06 110 28 7 0 0 0 0.0022107 1 8935 80.688 69.931 1 1.0442 0.87345 0 6573800 3154400 3419400 28665 1483 10859 11153 44820 44820 QLEEEQAVRPK 11 1 1 Unmodified _QLEEEQAVRPK_ 0 0 1 P14635;E9PC90;H1UBN2 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.8654 2 663.854241 1325.69393 73288.85 0.58833 0.00039057 -0.026919 -1.7871E-05 0.56141 0.0003727 663.85414227744 672.865521726587 25.045 0.45604 25.045 24.825 25.281 0 130 24 8 0 0 0 0.00030513 2 8468 99.013 76.927 1 1.1379 0.95428 0 5218700 2371500 2847200 28666 1483 10859 11153 44821;44822 44821 QLELENLTTQETR 13 0 1 Unmodified _QLELENLTTQETR_ 0 0 0 A8K3M3;P18031;B4DSN5 A8K3M3 A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.4075 2 787.904659 1573.79476 NaN NaN NaN -0.031994 -2.5209E-05 NaN NaN NaN NaN 78.927 0.28152 78.927 78.757 79.039 0 0 0 0 0.046081 1 47859 40.589 23.918 1 NaN NaN 0 4344700 4344700 0 28667 724 10860 11154 44823 44823 QLEVEPEEPEAENK 14 1 0 Unmodified _QLEVEPEEPEAENK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.894 2 820.886132 1639.75771 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.799 1 49.799 49.299 50.299 -3.8147E-06 0 0 0 1.3572E-06 1 27442 100.88 69.281 1 28668 946 10861 11155 44824 44824 QLFHPEQLITGK 12 1 0 Unmodified _QLFHPEQLITGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;F8VX09;F8VWV9;C9K0S6;Q6QMJ5;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA8;TUBA1;TUBA4A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.6014 3 470.92951 1409.7667 86498.66 0.15014 7.0706E-05 0.14997 7.0627E-05 0.30011 0.00014133 470.92958452075 473.600950136668 81.614 1.5447 81.614 80.772 82.317 0 798 133 9 0 0 0 7.4875E-06 3 48868 82.85 0 1 1.654 1.9466 0 320130000 122150000 197990000 28669 922;1257;1659;1869 10862 11156 44825;44826;44827 44827 QLFHPEQLITGK 12 1 0 Unmodified _QLFHPEQLITGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;F8VX09;F8VWV9;C9K0S6;Q6QMJ5;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA8;TUBA1;TUBA4A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.8906 2 705.890626 1409.7667 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.736 1 81.736 81.236 82.236 0 0 0 0 0.0067165 1 48743 61.593 0 1 28670 922;1257;1659;1869 10862 11156 44828 44828 QLFHPEQLITGK 12 1 0 Unmodified _QLFHPEQLITGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;F8VX09;F8VWV9;C9K0S6;Q6QMJ5;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA8;TUBA1;TUBA4A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.6006 3 470.92951 1409.7667 86863.78 0.44879 0.00021135 -0.28833 -0.00013578 0.16046 7.5567E-05 470.929386320424 473.600716317867 79.645 1.5125 79.645 79.03 80.542 0 641 108 10 0 0 0 0.00073209 3 48777 52.071 0 1 1.6312 1.8796 0 181360000 67826000 113540000 28671 922;1257;1659;1869 10862 11156 44829;44830;44831 44831 QLFHPEQLITGK 12 1 0 Unmodified _QLFHPEQLITGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;F8VX09;F8VWV9;C9K0S6;Q6QMJ5;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA8;TUBA1;TUBA4A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.8986 2 705.890626 1409.7667 73401.17 0.86223 0.00060864 0.64079 0.00045233 1.503 0.001061 705.890748368129 709.898252509478 79.539 1.0632 79.539 79.072 80.135 0 328 84 7 0 0 0 3.6932E-29 2 48344 164.9 0 1 1.5777 1.7641 0 53440000 18620000 34820000 28672 922;1257;1659;1869 10862 11156 44832;44833 44833 QLFHPEQLITGK 12 1 0 Unmodified _QLFHPEQLITGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;F8VX09;F8VWV9;C9K0S6;Q6QMJ5;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA8;TUBA1;TUBA4A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.9295 3 470.92951 1409.7667 87519.88 0.25529 0.00012022 -0.13208 -6.2201E-05 0.12321 5.8021E-05 470.929434214212 473.600804974719 92.128 0.91966 92.128 91.795 92.714 0 351 50 10 0 0 0 0.0041822 2 51203 44.193 0 1 1.3438 1.1046 0 38771000 15769000 23003000 28673 922;1257;1659;1869 10862 11156 44834;44835 44835 QLFHPEQLITGK 12 1 0 Unmodified _QLFHPEQLITGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;F8VX09;F8VWV9;C9K0S6;Q6QMJ5;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA8;TUBA1;TUBA4A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.898 2 705.890626 1409.7667 72972.62 0.69931 0.00049363 0.15481 0.00010928 0.85412 0.00060291 705.890495306497 709.897733327718 92.115 0.81558 92.115 91.833 92.649 0 226 44 8 0 0 0 0.00024531 2 51190 79.201 0 1 1.3829 1.0784 0 15857000 6098800 9757700 28674 922;1257;1659;1869 10862 11156 44836;44837 44836 QLFHPEQLITGK 12 1 0 Unmodified _QLFHPEQLITGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;F8VX09;F8VWV9;C9K0S6;Q6QMJ5;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA8;TUBA1;TUBA4A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 470.9293 3 470.92951 1409.7667 87815.52 0.1998 9.4092E-05 -0.0049385 -2.3257E-06 0.19486 9.1767E-05 470.929487403352 473.600821460972 91.779 1.2701 91.779 91.448 92.718 0 404 73 10 0 0 0 0.012742 2 50171 34.05 0 1 1.3402 1.1033 0 28579000 12376000 16203000 28675 922;1257;1659;1869 10862 11156 44838;44839 44839 QLFHPEQLITGK 12 1 0 Unmodified _QLFHPEQLITGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;F8VRZ4;F8VS66;F8VX09;F8VWV9;C9K0S6;Q6QMJ5;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA8;TUBA1;TUBA4A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.8915 2 705.890626 1409.7667 74007.81 0.46045 0.00032503 0.25638 0.00018098 0.71684 0.00050601 705.891197747601 709.897646522896 91.802 0.87971 91.802 91.397 92.277 0 245 54 8 0 0 0 0.00022667 2 50295 92.538 0 1 1.3049 1.0773 0 11374000 4676400 6697300 28676 922;1257;1659;1869 10862 11156 44840;44841 44840 QLFNSLATQEGEWK 14 1 0 Unmodified _QLFNSLATQEGEWK_ 0 0 0 A8KA74;P78316 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 825.9117 2 825.909744 1649.80494 67306.97 0.75895 0.00062682 -0.77059 -0.00063644 -0.011642 -9.6152E-06 825.909672394624 829.916583967044 106.94 0.54292 106.94 106.69 107.23 0 173 32 7 0 0 0 0.017652 2 60293 42.475 41.052 1 1.5239 1.2429 0 5832800 2460000 3372900 28677 790 10863 11157 44842;44843 44843 QLFSSLFSGILK 12 1 0 Unmodified _QLFSSLFSGILK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.8928 2 670.384645 1338.75474 76368.2 0.92984 0.00062335 -0.35589 -0.00023858 0.57395 0.00038477 670.885947780056 674.892955643625 130.59 0.70297 130.59 130.26 130.97 0 182 46 6 0 0 0 2.2866E-05 2 85171 102.06 86.911 1 0.54354 0.552 0 6212700 3732500 2480300 28678 1665 10864 11158 44844;44845 44845 QLFSSLFSGILK 12 1 0 Unmodified _QLFSSLFSGILK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.3844 2 670.384645 1338.75474 76094.42 0.70722 0.00047411 -0.20425 -0.00013693 0.50297 0.00033719 670.38476258812 674.390542909286 129.97 0.92758 129.97 129.77 130.7 0 193 62 5 0 0 0 0.0017153 2 86788 60.434 53.765 1 0.59058 0.58597 0 6042900 3812300 2230600 28679 1665 10864 11158 44846;44847 44846 QLGEVELQCGICTK 14 1 0 Unmodified _QLGEVELQCGICTK_ 0 0 0 A8K6T5;Q9UBL3;E5RFH5 A8K6T5 A8K6T5 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.3983 2 817.897465 1633.78038 67537.67 0.50595 0.00041381 0.1747 0.00014289 0.68065 0.0005567 818.399616512552 821.90438211281 88.87 0.39903 88.87 88.678 89.077 0 108 26 6 0 0 0 0.0049382 1 48195 44.612 44.612 1 1.5327 1.2235 0 1976200 785830 1190400 28680 763 10865 11159 44848 44848 QLGGLYINFNADK 13 1 0 Unmodified _QLGGLYINFNADK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.8768 2 726.877716 1451.74088 NaN NaN NaN 0.24972 0.00018151 NaN NaN NaN NaN 100.84 0.73613 100.84 100.38 101.11 -7.6294E-06 0 0 0 0.0037874 1 61887 63.864 36.749 1 NaN NaN 0 12804000 12804000 0 28681 1813 10866 11160 44849 44849 QLGGLYINFNADK 13 1 0 Unmodified _QLGGLYINFNADK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.878 2 726.877716 1451.74088 NaN NaN NaN -0.090634 -6.588E-05 NaN NaN NaN NaN 100.02 0.68178 100.02 99.684 100.37 0 0 0 0 0.051491 1 62823 39.917 12.175 1 NaN NaN 0 8469300 8469300 0 28682 1813 10866 11160 44850 44850 QLGGLYINFNADK 13 1 0 Unmodified _QLGGLYINFNADK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.8799 2 726.877716 1451.74088 71862.63 1.0635 0.00077304 0.20391 0.00014822 1.2674 0.00092125 726.877920632089 730.884972575498 113.2 0.85261 113.2 112.74 113.6 0 138 40 5 0 0 0 0.047779 1 65852 40.449 29.62 1 1.349 1.0643 0 17831000 9653500 8177000 28683 1813 10866 11160 44851 44851 QLGGLYINFNADK 13 1 0 Unmodified _QLGGLYINFNADK_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 726.8788 2 726.877716 1451.74088 71813.35 0.72773 0.00052897 0.86002 0.00062513 1.5878 0.0011541 726.878299140341 730.885467453598 113.02 0.56993 113.02 112.78 113.35 0 116 28 6 0 0 0 0.029043 1 64796 44.71 28.745 1 1.4446 1.16 0 14755000 7901200 6854100 28684 1813 10866 11160 44852 44852 QLGLPHQR 8 0 1 Unmodified _QLGLPHQR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 316.8508 3 316.850643 947.530098 107952.8 -0.088201 -2.7947E-05 -0.13116 -4.1558E-05 -0.21936 -6.9504E-05 316.850579459339 320.186629622926 26.662 0.45715 26.662 26.436 26.893 0 106 28 7 0 0 0 0.015964 2 12112 36.701 29.573 1 0.7461 0.77753 0 21264000 11980000 9284200 28685 899;1099 10867 11161 44853;44854 44854 QLGLPHQR 8 0 1 Unmodified _QLGLPHQR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 316.8506 3 316.850643 947.530098 105017.5 0.41118 0.00013028 0.068436 2.1684E-05 0.47961 0.00015197 316.850565356602 320.186685824131 26.011 0.37466 26.011 25.877 26.252 0 81 18 7 0 0 0 0.0067697 1 11502 50.127 42.998 1 0.81653 0.89439 0 31783000 16956000 14826000 28686 899;1099 10867 11161 44855 44855 QLGLPHQR 8 0 1 Unmodified _QLGLPHQR_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.7721 2 474.772326 947.530098 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.06 1 26.06 25.56 26.56 0 0 0 0 0.044084 1 11552 56.547 2.3419 1 28687 899;1099 10867 11161 44856 44856 QLGLPTALK 9 1 0 Unmodified _QLGLPTALK_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.8028 2 470.794935 939.575317 89637.97 0.80405 0.00037854 -0.77074 -0.00036286 0.033306 1.568E-05 470.79433712973 474.801773380144 80.768 0.52591 80.768 80.54 81.066 0 244 45 7 0 0 0 0.015205 1 48009 54.982 24.42 1 1.2302 1.3268 0 37458000 14741000 22717000 28688 302 10868 11162 44857 44857 QLGLPTALK 9 1 0 Unmodified _QLGLPTALK_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 474.8021 2 470.794935 939.575317 88428.52 0.25315 0.00011918 0.02438 1.1478E-05 0.27753 0.00013066 470.794880584964 474.801927346306 92.379 0.71214 92.379 92.002 92.714 0 166 37 6 0 0 0 0.020683 1 51451 50.04 28.359 1 0.93967 0.75145 0 7066500 3760400 3306100 28689 302 10868 11162 44858 44858 QLGLPTALK 9 1 0 Unmodified _QLGLPTALK_ 0 0 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 474.8015 2 470.794935 939.575317 88477.39 0.14573 6.8611E-05 -0.091023 -4.2853E-05 0.054712 2.5758E-05 470.79480225152 474.801884754202 92.166 0.77547 92.166 91.791 92.567 0 172 40 6 0 0 0 0.0091583 2 50434 60.436 39.737 1 0.88112 0.71961 0 8074700 4482100 3592600 28690 302 10868 11162 44859;44860 44860 QLGQSEGSVSLSLVK 15 1 0 Unmodified _QLGQSEGSVSLSLVK_ 0 0 0 Q9GZR2;B4E331;B4DJ95;A0A0C4DG22 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.4287 2 766.419945 1530.82534 70743.5 0.88955 0.00068177 -0.14579 -0.00011174 0.74376 0.00057003 766.41996876418 770.42724526426 97.121 0.49032 97.121 96.839 97.329 0 123 24 8 0 0 0 0.0016911 2 54547 47.039 47.039 1 1.5917 1.2672 0 6708700 2675900 4032900 28691 2021 10869 11163 44861;44862 44861 QLIELDYLNPGSIR 14 0 1 Unmodified _QLIELDYLNPGSIR_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.9491 2 815.943587 1629.87262 NaN NaN NaN -0.41084 -0.00033522 NaN NaN NaN NaN 115.72 0.3407 115.72 115.59 115.93 7.6294E-06 0 0 0 0.00056856 2 75594 78.342 56.969 1 NaN NaN 0 2846800 0 2846800 28692 1901 10870 11164 44863;44864 44864 QLIPIFTDVALK 12 1 0 Unmodified _QLIPIFTDVALK_ 0 0 0 Q9UKN8;Q05CN7 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.4162 2 679.408121 1356.80169 76138.66 0.59204 0.00040224 -0.093069 -6.3232E-05 0.49897 0.00033901 679.40792540039 683.414926931135 124.35 0.48903 124.35 124.1 124.59 7.6294E-06 129 32 6 0 0 0 0.0045039 2 80663 53.327 42.176 1 0.9345 0.94934 0 6274200 2981600 3292600 28693 2107 10871 11165 44865;44866 44865 QLIPIFTDVALK 12 1 0 Unmodified _QLIPIFTDVALK_ 0 0 0 Q9UKN8;Q05CN7 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.4081 2 679.408121 1356.80169 75634.12 0.80332 0.00054578 0.013798 9.3742E-06 0.81712 0.00055516 679.408116351266 683.4150504945 123.88 0.42606 123.88 123.67 124.09 -7.6294E-06 131 29 6 0 0 0 0.0045837 2 82272 53.124 45.198 1 0.83216 0.83887 0 7559900 4112100 3447700 28694 2107 10871 11165 44867;44868 44868 QLIVGVNK 8 1 0 Unmodified _QLIVGVNK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 439.7806 2 435.774003 869.533452 90983.76 0.035427 1.5438E-05 -0.30648 -0.00013356 -0.27105 -0.00011812 435.774050940005 439.7807917306 46.113 1.573 46.113 45.696 47.269 0 543 131 9 0 0 0 0.024989 1 25253 55.504 27.25 1 2.2677 2.6773 0 1026100000 321540000 704530000 28695 1658;1790 10872 11166 44869 44869 QLIVGVNK 8 1 0 Unmodified _QLIVGVNK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;Q53G89;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q05639;Q59GP5;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 439.7809 2 435.774003 869.533452 90173.15 -0.16078 -7.0065E-05 -0.06647 -2.8966E-05 -0.22725 -9.9031E-05 435.774111877634 439.780872184109 53.799 1.5137 53.799 53.358 54.872 -3.8147E-06 479 113 9 0 0 0 0.043762 1 26061 46.021 13.956 1 1.5877 1.3319 0 48010000 18947000 29063000 28696 1658;1790 10872 11166 44870 44870 QLLCGAAIGTHEDDK 15 1 0 Unmodified _QLLCGAAIGTHEDDK_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5;Q6RUP9 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.8944 2 814.390861 1626.76717 69559.7 0.7821 0.00063693 0.45832 0.00037325 1.2404 0.0010102 814.390926285438 818.900017538554 48.232 0.29234 48.232 48.128 48.42 0 62 24 4 0 0 0 0.00022286 1 26225 85.522 73.308 1 1.0069 1.0544 0 15160000 7965600 7194300 28697 1282 10873 11167 44871 44871 QLLCGAAIGTHEDDK 15 1 0 Unmodified _QLLCGAAIGTHEDDK_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5;Q6RUP9 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.5975 3 543.263 1626.76717 82084.93 0.82098 0.00044601 0.07654 4.1582E-05 0.89752 0.00048759 543.262937294991 545.934604500979 48.244 0.50464 48.244 48.067 48.571 0 190 41 6 0 0 0 4.1353E-05 1 26238 80.387 75.996 1 0.96223 1.0318 0 32603000 16721000 15881000 28698 1282 10873 11167 44872 44872 QLLCGAAIGTHEDDK 15 1 0 Unmodified _QLLCGAAIGTHEDDK_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5;Q6RUP9 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.9349 3 543.263 1626.76717 83161.57 0.59962 0.00032575 -0.12997 -7.0608E-05 0.46965 0.00025515 543.262870951802 545.934435828199 46.87 0.46218 46.87 46.674 47.136 0 235 41 9 0 0 0 4.0057E-06 1 25982 90.725 90.725 1 0.86817 0.87638 0 28388000 14317000 14071000 28699 1282 10873 11167 44873 44873 QLLCGAAIGTHEDDK 15 1 0 Unmodified _QLLCGAAIGTHEDDK_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5;Q6RUP9 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.3972 2 814.390861 1626.76717 NaN NaN NaN 0.26033 0.00021201 NaN NaN NaN NaN 46.875 0.26401 46.875 46.736 47 0 0 0 0 0.010979 1 25926 50.207 34.942 1 NaN NaN 0 5302800 0 5302800 28700 1282 10873 11167 44874 44874 QLLCGAAIGTHEDDK 15 1 0 Unmodified _QLLCGAAIGTHEDDK_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5;Q6RUP9 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.9343 3 543.263 1626.76717 80469.36 0.65005 0.00035315 -0.50758 -0.00027575 0.14247 7.74E-05 543.262790372382 545.934037909672 55.398 0.49494 55.398 55.194 55.689 3.8147E-06 171 30 8 0 0 0 0.00021772 2 27739 51.727 51.727 1 1.3236 1.0462 0 6107800 2468600 3639200 28701 1282 10873 11167 44875;44876 44876 QLLCGAAIGTHEDDK 15 1 0 Unmodified _QLLCGAAIGTHEDDK_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5;Q6RUP9 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 818.3978 2 814.390861 1626.76717 69303.09 0.66985 0.00054552 -0.45283 -0.00036878 0.21702 0.00017674 814.39092549675 818.397596037677 55.382 0.42567 55.382 55.18 55.606 0 107 26 6 0 0 0 0.024163 1 27742 28.624 28.624 1 1.3987 1.1669 0 2237300 1037400 1200000 28702 1282 10873 11167 44877 44877 QLLCGAAIGTHEDDK 15 1 0 Unmodified _QLLCGAAIGTHEDDK_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5;Q6RUP9 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.2639 3 543.263 1626.76717 82044.13 0.48933 0.00026583 -0.25455 -0.00013829 0.23478 0.00012754 543.262834271829 545.934251571326 55.829 0.53137 55.829 55.537 56.069 3.8147E-06 199 33 9 0 0 0 0.0014842 2 27358 38.14 35.901 1 1.2992 1.0496 0 4330500 1704800 2625700 28703 1282 10873 11167 44878;44879 44878 QLLCGAAIGTHEDDK 15 1 0 Unmodified _QLLCGAAIGTHEDDK_ 0 0 0 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5;Q6RUP9 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.8989 2 814.390861 1626.76717 68800.59 0.59839 0.00048732 -0.18895 -0.00015388 0.40944 0.00033344 814.39134412215 818.397895761898 55.762 0.44571 55.762 55.558 56.004 -3.8147E-06 109 27 5 0 0 0 0.037871 1 27446 23.711 23.711 1 1.3755 1.077 0 2079600 805630 1274000 28704 1282 10873 11167 44880 44880 QLLFEDTSLTFGTSSR 16 0 1 Unmodified _QLLFEDTSLTFGTSSR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.9006 2 901.451973 1800.88939 65687.07 0.76085 0.00068587 -0.78042 -0.00070351 -0.019577 -1.7648E-05 901.451631200789 906.95717897941 114.14 0.46194 114.14 113.91 114.37 7.6294E-06 142 33 6 0 0 0 0.015278 1 72300 45.28 45.28 1 0.99948 0.99819 0 8052800 4281600 3771200 28705 1942 10874 11168 44881 44881 QLLFEDTSLTFGTSSR 16 0 1 Unmodified _QLLFEDTSLTFGTSSR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 906.458 2 901.451973 1800.88939 67204 0.39168 0.00035308 -0.86709 -0.00078164 -0.4754 -0.00042855 901.451960455172 906.957364171322 113.6 0.39923 113.6 113.4 113.8 0 114 27 6 0 0 0 5.7666E-12 2 73697 113.77 113.77 1 0.92799 0.93591 0 10464000 4996100 5467500 28706 1942 10874 11168 44882;44883 44882 QLLFEDTSLTFGTSSR 16 0 1 Unmodified _QLLFEDTSLTFGTSSR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 906.4576 2 901.451973 1800.88939 62725.53 0.58177 0.00052444 -0.43993 -0.00039658 0.14184 0.00012786 901.45185950653 906.455898024456 125.15 0.57416 125.15 124.95 125.52 0 98 22 6 0 0 0 0.00015387 2 75060 69.03 69.03 1 1.5792 1.3572 0 7875000 3276100 4598900 28707 1942 10874 11168 44884;44885 44884 QLLFEDTSLTFGTSSR 16 0 1 Unmodified _QLLFEDTSLTFGTSSR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 906.9584 2 901.451973 1800.88939 63910.1 0.46309 0.00041745 -0.0037614 -3.3907E-06 0.45933 0.00041406 901.453091895252 906.456046642162 125.07 0.58229 125.07 124.75 125.33 7.6294E-06 109 25 8 0 0 0 0.00040239 2 74069 50.46 50.46 1 1.5041 1.248 0 5557200 2268200 3289000 28708 1942 10874 11168 44886;44887 44886 QLLGEHLTAILQK 13 1 0 Unmodified _QLLGEHLTAILQK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.6243 3 488.624198 1462.85076 86326.47 0.25389 0.00012406 0.60505 0.00029564 0.85894 0.0004197 488.624336927677 491.29573742437 104.38 0.66857 104.38 104.09 104.75 0 146 42 5 0 0 0 0.047609 2 59323 19.199 17.786 1 0.98327 0.78154 0 10027000 5167200 4859600 28709 1718 10875 11169 44888;44889 44888 QLLGEHLTAILQK 13 1 0 Unmodified _QLLGEHLTAILQK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.625 3 488.624198 1462.85076 87259.86 0.12695 6.2033E-05 0.65657 0.00032082 0.78352 0.00038285 488.624427758168 491.295777409873 104.01 0.58148 104.01 103.77 104.36 0 188 37 7 0 0 0 0.022049 1 58232 24.558 22.132 1 0.91685 0.7381 0 4264800 2389800 1875000 28710 1718 10875 11169 44890 44890 QLLLTPNAVVIVEDAK 16 1 0 Unmodified _QLLLTPNAVVIVEDAK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 862.5056 2 862.003645 1721.99274 66146.68 0.93959 0.00080993 0.94227 0.00081224 1.8819 0.0016222 862.003863858228 866.012612486945 132.33 0.40042 132.33 132.14 132.54 0 74 18 7 0 0 0 0.00040914 2 80470 50.145 50.145 1 1.5167 1.1774 0 3555500 1462800 2092700 28711 1088;1189 10876 11170 44891;44892 44892 QLLLTPNAVVIVEDAK 16 1 0 Unmodified _QLLLTPNAVVIVEDAK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 866.0133 2 862.003645 1721.99274 65926.59 0.96631 0.00083297 1.0967 0.00094534 2.063 0.0017783 862.5051760884 866.01200166416 132.09 0.29988 132.09 131.9 132.2 0 78 14 8 0 0 0 0.0077595 1 79311 34.75 21.071 1 1.3092 1.0685 0 4683900 1816700 2867200 28712 1088;1189 10876 11170 44893 44893 QLLQANPILEAFGNAK 16 1 0 Unmodified _QLLQANPILEAFGNAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z406;M0QY43 A0A024R1N1;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.9776 2 863.977961 1725.94137 64783.7 1.0856 0.00093792 0.19707 0.00017026 1.2827 0.0011082 864.479736377659 867.984780376624 121.51 0.5822 121.51 121.27 121.85 0 249 37 10 0 0 0 1.4377E-17 2 78422 131.17 131.17 1 1.6343 1.7901 0 52326000 20560000 31765000 28713 81;1875 10877 11171 44894;44895 44895 QLLQANPILEAFGNAK 16 1 0 Unmodified _QLLQANPILEAFGNAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z406;M0QY43 A0A024R1N1;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.9846 2 863.977961 1725.94137 65004.79 0.75061 0.00064851 0.41129 0.00035535 1.1619 0.0010039 864.479888379186 867.985140074151 120.99 0.56625 120.99 120.76 121.32 0 222 34 10 0 0 0 2.7718E-12 3 79936 119.76 119.76 1 1.6939 1.8983 0 80500000 27860000 52640000 28714 81;1875 10877 11171 44896;44897;44898 44897 QLLQANPILEAFGNAK 16 1 0 Unmodified _QLLQANPILEAFGNAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z406;M0QY43 A0A024R1N1;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 868.4853 2 863.977961 1725.94137 NaN NaN NaN 0.34268 0.00029607 NaN NaN NaN NaN 133.87 0.47429 133.87 133.63 134.1 0 0 0 0 1.5634E-06 1 80604 88.187 54.958 1 NaN NaN 0 25665000 0 25665000 28715 81;1875 10877 11171 44899 44899 QLLQVIQEK 9 1 0 Unmodified _QLLQVIQEK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.837 2 549.829506 1097.64446 NaN NaN NaN 0.2593 0.00014257 NaN NaN NaN NaN 72.654 0.23831 72.654 72.512 72.75 0 0 0 0 0.0015777 1 42573 85.38 38.954 1 NaN NaN 0 5339100 0 5339100 28716 2033 10878 11172 44900 44900 QLLQVIQEK 9 1 0 Unmodified _QLLQVIQEK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.8295 2 549.829506 1097.64446 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.664 1 72.664 72.164 73.164 0 0 0 0 0.001745 1 42572 90.657 31.675 1 28717 2033 10878 11172 44901 44901 QLLQVIQEK 9 1 0 Unmodified _QLLQVIQEK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.8365 2 549.829506 1097.64446 85997.16 0.15328 8.428E-05 0.26514 0.00014578 0.41842 0.00023006 549.829728239911 553.836195700868 71.314 0.21021 71.314 71.225 71.435 0 46 15 5 0 0 0 0.0011318 1 42736 89.542 42.46 1 1.2628 1.2875 0 12167000 5352100 6815200 28718 2033 10878 11172 44902 44902 QLLSYITK 8 1 0 Unmodified _QLLSYITK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.294 2 483.286943 964.559333 87857.57 0.20799 0.00010052 0.29917 0.00014459 0.50716 0.00024511 483.287081067235 487.293956950285 75.591 0.72015 75.591 75.142 75.862 0 273 60 6 0 0 0 0.017453 1 44332 60.436 10.787 1 0.79609 0.86065 0 35512000 17770000 17741000 28719 908 10879 11173 44903 44903 QLLSYITK 8 1 0 Unmodified _QLLSYITK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.2874 2 483.286943 964.559333 88651.78 0.30656 0.00014816 0.0095531 4.6169E-06 0.31611 0.00015277 483.286850659402 487.293897682301 74.186 0.74756 74.186 73.775 74.523 0 304 62 7 0 0 0 0.01426 2 44511 63.419 26.718 1 0.83452 0.92709 0 49969000 27055000 22914000 28720 908 10879 11173 44904;44905 44904 QLLSYITK 8 1 0 Unmodified _QLLSYITK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.2945 2 483.286943 964.559333 87380.52 0.14932 7.2166E-05 0.30104 0.00014549 0.45036 0.00021765 483.287033905233 487.294085847018 86.035 1.1988 86.035 85.472 86.67 0 365 79 7 0 0 0 0.020265 2 46957 58.596 17.91 1 1.6039 1.2461 0 15009000 5641200 9367800 28721 908 10879 11173 44906;44907 44907 QLLSYITK 8 1 0 Unmodified _QLLSYITK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.2943 2 483.286943 964.559333 87221.35 0.3173 0.00015335 0.03508 1.6954E-05 0.35238 0.0001703 483.286858603432 487.293938208418 86.079 1.1928 86.079 85.516 86.709 0 350 69 8 0 0 0 0.044697 1 46180 45.68 13.325 1 1.6057 1.3234 0 12078000 4615700 7462700 28722 908 10879 11173 44908 44908 QLNLENVVGDK 11 1 0 Unmodified _QLNLENVVGDK_ 0 0 0 A8K7H4;O43929;Q96B14;B7Z2M4;CON__Q2YDI2;C9JGH7;C9J2X8;Q53SE3 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.83 2 614.830234 1227.64592 82186.33 0.6421 0.00039478 -0.43186 -0.00026552 0.21024 0.00012926 614.829724234623 618.837003238908 90.897 0.40826 90.897 90.685 91.093 7.6294E-06 84 24 5 0 0 0 0.020453 1 50436 43.77 32.94 1 1.2818 1.0503 0 2487900 1037000 1450900 + 28723 772 10880 11174 44909 44909 QLNPESIRPGGPGGLSR 17 0 2 Unmodified _QLNPESIRPGGPGGLSR_ 0 0 1 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.6514 3 578.979703 1733.91728 80804.99 0.62223 0.00036026 0.11766 6.8122E-05 0.73989 0.00042838 579.313696124191 585.651793845252 57.918 0.40751 57.918 57.764 58.171 -3.8147E-06 99 33 6 0 0 0 0.00053503 2 33540 37.583 33.481 1 1.1513 1.1899 0 12563000 6930600 5632100 28724 122 10881 11175 44910;44911 44910 QLNPESIRPGGPGGLSR 17 0 2 Unmodified _QLNPESIRPGGPGGLSR_ 0 0 1 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.6517 3 578.979703 1733.91728 82084.49 0.46546 0.00026949 -0.01827 -1.0578E-05 0.44719 0.00025892 578.979872782915 585.651741429638 69.403 0.36006 69.403 69.227 69.587 0 102 23 6 0 0 0 0.00097133 1 35541 27.149 23.308 1 1.784 1.6117 0 2910800 1131300 1779500 28725 122 10881 11175 44912 44912 QLPLLTSALHGLQQQHPAFSGVAR 24 0 1 Unmodified _QLPLLTSALHGLQQQHPAFSGVAR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.3569 4 643.105399 2568.39249 73578.02 0.56807 0.00036533 0.42277 0.00027189 0.99084 0.00063721 643.356530941584 645.85830481061 120.57 0.58743 120.57 120.18 120.77 0 160 26 10 0 0 0 4.2692E-05 1 71433 37.856 37.856 1 1.3916 1.1405 0 12709000 5537500 7171500 28726 2038 10882 11176 44913 44913 QLPLLTSALHGLQQQHPAFSGVAR 24 0 1 Unmodified _QLPLLTSALHGLQQQHPAFSGVAR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.358 4 643.105399 2568.39249 74923.43 0.84753 0.00054505 0.52072 0.00033488 1.3683 0.00087993 643.356551371603 645.858506636247 120.13 0.61125 120.13 119.82 120.43 -7.6294E-06 166 28 10 0 0 0 1.3699E-08 1 70395 54.235 47.203 1 1.4261 1.244 0 31538000 12699000 18839000 28727 2038 10882 11176 44914 44914 QLPLLTSALHGLQQQHPAFSGVAR 24 0 1 Unmodified _QLPLLTSALHGLQQQHPAFSGVAR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 860.8075 3 857.138106 2568.39249 NaN NaN NaN 0.42497 0.00036426 NaN NaN NaN NaN 120.13 0.50623 120.13 119.87 120.37 0 0 0 0 0.0011198 1 70265 36.9 23.712 1 NaN NaN 0 10741000 0 10741000 28728 2038 10882 11176 44915 44915 QLQEERPELSESELTR 16 0 2 Unmodified _QLQEERPELSESELTR_ 0 0 1 E9PKP7;P17480;A8K962;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.995 3 648.660476 1942.9596 74829.13 0.65932 0.00042768 0.9116 0.00059132 1.5709 0.001019 648.994900383227 655.334346847801 58.152 0.86469 58.152 57.834 58.698 0 457 69 9 0 0 0 8.0761E-18 3 32796 106.36 106.36 1 0.94844 1.0327 0 77407000 42359000 35048000 28729 1244 10883 11177 44916;44917;44918 44916 QLQEERPELSESELTR 16 0 2 Unmodified _QLQEERPELSESELTR_ 0 0 1 E9PKP7;P17480;A8K962;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.9955 3 648.660476 1942.9596 74279.7 0.80052 0.00051927 0.07237 4.6943E-05 0.87289 0.00056621 648.660463534754 655.332406413798 56.931 0.76475 56.931 56.634 57.399 3.8147E-06 329 57 8 0 0 0 5.3638E-18 1 32773 111.92 111.92 1 0.65457 0.76868 0 130050000 76735000 53316000 28730 1244 10883 11177 44919 44919 QLQEERPELSESELTR 16 0 2 Unmodified _QLQEERPELSESELTR_ 0 0 1 E9PKP7;P17480;A8K962;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.9957 3 648.660476 1942.9596 74279.8 0.6545 0.00042455 0.011145 7.2296E-06 0.66564 0.00043178 648.994817638368 655.332666690261 68.263 0.76204 68.263 67.899 68.661 0 402 55 10 0 0 0 0.00033139 1 35499 37.851 37.851 1 1.3233 1.0716 0 50474000 21925000 28550000 28731 1244 10883 11177 44920 44920 QLQEERPELSESELTR 16 0 2 Unmodified _QLQEERPELSESELTR_ 0 0 1 E9PKP7;P17480;A8K962;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.6611 3 648.660476 1942.9596 74505.25 0.55123 0.00035756 0.14539 9.4307E-05 0.69662 0.00045187 648.994816930286 655.332840796724 68.791 0.7795 68.791 68.464 69.243 0 400 54 11 0 0 0 7.2147E-05 2 35105 67.415 67.415 1 1.3121 1.2239 0 34463000 14894000 19569000 28732 1244 10883 11177 44921;44922 44921 QLQLAQEAAQK 11 1 0 Unmodified _QLQLAQEAAQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.3218 2 614.338227 1226.6619 80434.03 0.48576 0.00029842 -0.45534 -0.00027974 0.030417 1.8686E-05 614.337912496062 618.345029014694 40.536 0.23452 40.536 40.409 40.643 0 59 20 4 0 0 0 0.00044144 1 21228 101.46 101.46 1 1.3806 1.365 0 8369200 3507500 4861700 28733 1754 10884 11178 44923 44923 QLQQAQAAGAEQEVEK 16 1 0 Unmodified _QLQQAQAAGAEQEVEK_ 0 0 0 Q6FHX6;P39748;B4DWZ4;F5H1Y3 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.9427 2 864.431572 1726.84859 NaN NaN NaN -0.09696 -8.3815E-05 NaN NaN NaN NaN 34.767 0.22771 34.767 34.644 34.872 0 0 0 0 1.2092E-12 2 17425 111.94 65.935 1 NaN NaN 0 5301900 0 5301900 28734 1555 10885 11179 44924;44925 44925 QLQQAQAAGAEQEVEK 16 1 0 Unmodified _QLQQAQAAGAEQEVEK_ 0 0 0 Q6FHX6;P39748;B4DWZ4;F5H1Y3 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.4401 2 864.431572 1726.84859 NaN NaN NaN 0.1086 9.388E-05 NaN NaN NaN NaN 33.983 0.25232 33.983 33.893 34.146 0 0 0 0 3.5214E-18 2 17123 119.39 35.903 1 NaN NaN 0 5589200 0 5589200 28735 1555 10885 11179 44926;44927 44927 QLQQAQAAGAEQEVEK 16 1 0 Unmodified _QLQQAQAAGAEQEVEK_ 0 0 0 Q6FHX6;P39748;B4DWZ4;F5H1Y3 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 864.4308 2 864.431572 1726.84859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.076 1 34.076 33.576 34.576 0 0 0 0 3.5048E-05 1 17195 92.295 66.253 1 28736 1555 10885 11179 44928 44928 QLQQAQAAGAEQEVEK 16 1 0 Unmodified _QLQQAQAAGAEQEVEK_ 0 0 0 Q6FHX6;P39748;B4DWZ4;F5H1Y3 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 864.9338 2 864.431572 1726.84859 65047.91 0.32133 0.00027777 0.21456 0.00018548 0.5359 0.00046325 864.431969315474 868.438888415414 40.874 0.42359 40.874 40.681 41.104 0 193 35 7 0 0 0 0.00033586 1 18843 53.557 53.557 1 0.62289 0.49671 0 6838700 4460600 2378100 28737 1555 10885 11179 44929 44929 QLQQAQAAGAEQEVEK 16 1 0 Unmodified _QLQQAQAAGAEQEVEK_ 0 0 0 Q6FHX6;P39748;B4DWZ4;F5H1Y3 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 864.9319 2 864.431572 1726.84859 66391.96 0.1145 9.8976E-05 0.41132 0.00035556 0.52582 0.00045454 864.431958509943 868.439013503449 41.316 0.42105 41.316 41.08 41.501 3.8147E-06 189 33 7 0 0 0 0.0020821 2 18521 42.426 42.426 1 0.65507 0.53576 0 4789500 2858900 1930600 28738 1555 10885 11179 44930;44931 44930 QLSALHR 7 0 1 Unmodified _QLSALHR_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1;E7ERA2;Q76N55 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 412.7405 2 412.740494 823.466435 92871.1 -0.17208 -7.1025E-05 0.19617 8.0969E-05 0.024093 9.9441E-06 412.740493283792 417.744603736409 20.317 0.59904 20.317 20.108 20.708 0 94 24 8 0 0 0 0.028486 2 6736 71.852 20.951 1 0.89754 1.0238 0 120350000 63609000 56740000 28739 121 10886 11180 44932;44933 44933 QLSALHR 7 0 1 Unmodified _QLSALHR_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1;E7ERA2;Q76N55 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 412.7405 2 412.740494 823.466435 91596 -0.051025 -2.106E-05 -0.24458 -0.00010095 -0.29561 -0.00012201 412.740421653519 417.744457589265 20.057 0.44681 20.057 19.934 20.381 0 70 16 8 0 0 0 0.026734 2 6388 77.496 18.514 1 0.91833 1.0575 0 217010000 112020000 104980000 28740 121 10886 11180 44934;44935 44935 QLSALHR 7 0 1 Unmodified _QLSALHR_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1;E7ERA2;Q76N55 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 417.7443 2 412.740494 823.466435 92007.98 -0.56418 -0.00023286 0.47397 0.00019563 -0.090206 -3.7232E-05 412.74063173269 417.744794261411 21.423 0.55196 21.423 21.267 21.819 0 81 18 10 0 0 0 0.037563 1 6458 60.788 17.788 1 0.75568 0.64975 0 45918000 26409000 19509000 28741 121 10886 11180 44936 44936 QLSALHR 7 0 1 Unmodified _QLSALHR_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1;E7ERA2;Q76N55 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 412.7404 2 412.740494 823.466435 92625.84 -0.69328 -0.00028615 0.70202 0.00028975 0.0087418 3.6081E-06 412.740720788839 417.744857766394 21.211 0.64235 21.211 21.076 21.718 0 110 28 8 0 0 0 0.030596 2 5897 68.485 17.788 1 0.78266 0.67412 0 22149000 12158000 9991300 28742 121 10886 11180 44937;44938 44938 QLSAWCGPSSEDSR 14 0 1 Unmodified _QLSAWCGPSSEDSR_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.344 2 790.343911 1578.67327 70133.31 0.4446 0.00035139 0.76812 0.00060708 1.2127 0.00095847 790.846070625644 795.348774333086 59.354 0.40248 59.354 59.213 59.616 -3.8147E-06 120 31 5 0 0 0 0.038363 1 30269 28.764 27.919 1 0.50643 0.44061 0 1909900 1274900 634910 28743 1965 10887 11181 44939 44939 QLSESFK 7 1 0 Unmodified _QLSESFK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.7267 2 419.718893 837.423233 NaN NaN NaN -0.15348 -6.442E-05 NaN NaN NaN NaN 29.608 0.19672 29.608 29.495 29.692 0 0 0 0 0.037355 1 14336 64.567 31.957 1 NaN NaN 0 51409000 0 51409000 28744 167 10888 11182 44940 44940 QLSESFK 7 1 0 Unmodified _QLSESFK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.726 2 419.718893 837.423233 NaN NaN NaN -0.4373 -0.00018354 NaN NaN NaN NaN 29.104 0.25888 29.104 28.971 29.23 0 0 0 0 0.035968 1 13958 65.252 35.067 1 NaN NaN 0 46505000 0 46505000 28745 167 10888 11182 44941 44941 QLSESFK 7 1 0 Unmodified _QLSESFK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 423.726 2 419.718893 837.423233 NaN NaN NaN 0.066519 2.7919E-05 NaN NaN NaN NaN 33.477 0.28065 33.477 33.335 33.615 0 0 0 0 0.026542 1 14647 91.626 46.934 1 NaN NaN 0 14666000 0 14666000 28746 167 10888 11182 44942 44942 QLSESFK 7 1 0 Unmodified _QLSESFK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 423.7257 2 419.718893 837.423233 NaN NaN NaN 0.17682 7.4215E-05 NaN NaN NaN NaN 33.577 0.29429 33.577 33.427 33.721 0 0 0 0 0.052116 1 14194 57.281 32.607 1 NaN NaN 0 13688000 0 13688000 28747 167 10888 11182 44943 44943 QLSEVFIQLPSR 12 0 1 Unmodified _QLSEVFIQLPSR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;A0A0U1RRF5;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RR09;B1ALG1;F6T8Q0;B1ALG2;Q8N9Q1;P51531;F6VDE0;B4DSC8;A0A0U1RRG6;A0A0U1RQU0;F6XE55;A0A0U1RQW7;A0A0U1RRN2;A0A0U1RR83;A0A0U1RQX3;A0A0U1RR26;B4DNT1;B1ALF6 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.8965 2 708.895909 1415.77726 73848.77 0.91776 0.00065059 0.11642 8.2528E-05 1.0342 0.00073312 708.895743112935 713.900391986882 107.29 0.48158 107.29 107.04 107.52 7.6294E-06 160 37 6 0 0 0 0.00021532 1 66720 81.865 75.206 1 0.75296 0.79014 0 12006000 7061900 4944300 28748 695;1595 10889 11183 44944 44944 QLSEVFIQLPSR 12 0 1 Unmodified _QLSEVFIQLPSR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;A0A0U1RRF5;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RR09;B1ALG1;F6T8Q0;B1ALG2;Q8N9Q1;P51531;F6VDE0;B4DSC8;A0A0U1RRG6;A0A0U1RQU0;F6XE55;A0A0U1RQW7;A0A0U1RRN2;A0A0U1RR83;A0A0U1RQX3;A0A0U1RR26;B4DNT1;B1ALF6 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.897 2 708.895909 1415.77726 73838.95 0.83458 0.00059163 -0.093349 -6.6175E-05 0.74123 0.00052546 708.895846853816 713.900161856229 106.63 0.47784 106.63 106.41 106.89 0 157 36 6 0 0 0 0.00018123 2 67875 83 83 1 0.67826 0.68038 0 17562000 10405000 7156400 28749 695;1595 10889 11183 44945;44946 44945 QLSEVFIQLPSR 12 0 1 Unmodified _QLSEVFIQLPSR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;A0A0U1RRF5;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RR09;B1ALG1;F6T8Q0;B1ALG2;Q8N9Q1;P51531;F6VDE0;B4DSC8;A0A0U1RRG6;A0A0U1RQU0;F6XE55;A0A0U1RQW7;A0A0U1RRN2;A0A0U1RR83;A0A0U1RQX3;A0A0U1RR26;B4DNT1;B1ALF6 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.9006 2 708.895909 1415.77726 73855.34 0.86222 0.00061123 -0.17057 -0.00012092 0.69165 0.00049031 708.89574809556 713.899873396041 118.59 0.43521 118.59 118.38 118.81 7.6294E-06 89 21 6 0 0 0 0.0005714 1 70111 69.01 64.993 1 1.9623 1.6767 0 5787400 1619000 4168400 28750 695;1595 10889 11183 44947 44947 QLSEVFIQLPSR 12 0 1 Unmodified _QLSEVFIQLPSR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;A0A0U1RRF5;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RR09;B1ALG1;F6T8Q0;B1ALG2;Q8N9Q1;P51531;F6VDE0;B4DSC8;A0A0U1RRG6;A0A0U1RQU0;F6XE55;A0A0U1RQW7;A0A0U1RRN2;A0A0U1RR83;A0A0U1RQX3;A0A0U1RR26;B4DNT1;B1ALF6 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.901 2 708.895909 1415.77726 74998.76 0.73868 0.00052365 0.054751 3.8813E-05 0.79343 0.00056246 708.896201045634 713.900078560662 118.35 0.43522 118.35 118.16 118.59 -7.6294E-06 86 20 6 0 0 0 0.0088077 1 69009 47.559 47.559 1 1.9239 1.6241 0 4740900 1544400 3196500 28751 695;1595 10889 11183 44948 44948 QLSFAGVNGLR 11 0 1 Unmodified _QLSFAGVNGLR_ 0 0 0 Q03164;B4DIJ7 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180;Histone-lysine N-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.3281 2 581.32238 1160.63021 89393.94 0.30734 0.00017867 0.67485 0.0003923 0.98219 0.00057097 581.32266700687 586.326838333886 97.041 0.30379 97.041 96.863 97.167 0 44 14 4 0 0 0 0.031169 1 53739 38.303 31.243 1 2.7256 2.3751 0 1491200 396590 1094600 28752 1680 10890 11184 44949 44949 QLSSEELEQFQK 12 1 0 Unmodified _QLSSEELEQFQK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.8709 2 733.362096 1464.70964 70392.56 0.56216 0.00041227 -1.1236 -0.00082404 -0.56149 -0.00041177 733.361123170951 737.367685729814 79.404 0.34113 79.404 79.202 79.543 0 85 19 6 0 0 0 0.0005793 1 42749 68.893 56.317 1 0.80781 0.66185 0 2554000 1404500 1149500 28753 1561 10891 11185 44950 44950 QLSSGVSEIR 10 0 1 Unmodified _QLSSGVSEIR_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.2948 2 538.290745 1074.56694 82041 0.48891 0.00026317 -0.077541 -4.1739E-05 0.41137 0.00022143 538.290775788458 543.294749684073 39.673 0.73775 39.673 39.373 40.111 0 341 61 8 0 0 0 2.2309E-06 2 20612 111.06 79.757 1 1.3591 1.5771 0 174640000 75231000 99407000 28754 1443 10892 11186 44951;44952 44952 QLSSGVSEIR 10 0 1 Unmodified _QLSSGVSEIR_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.2919 2 538.290745 1074.56694 82909.45 0.51636 0.00027795 0.083314 4.4847E-05 0.59967 0.0003228 538.290817461775 543.294839904585 38.587 0.68023 38.587 38.328 39.008 0 292 58 8 0 0 0 0.00031979 1 20214 90.15 56.6 1 1.2824 1.4733 0 195010000 84604000 110400000 28755 1443 10892 11186 44953 44953 QLSSGVSEIR 10 0 1 Unmodified _QLSSGVSEIR_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.295 2 538.290745 1074.56694 82094.43 0.51056 0.00027483 0.010938 5.8879E-06 0.5215 0.00028072 538.290732717912 543.294788878449 45.43 0.76674 45.43 45.07 45.837 0 318 56 8 0 0 0 0.0075601 2 21725 57.267 45.312 1 1.21 1 0 19325000 8831200 10494000 28756 1443 10892 11186 44954;44955 44955 QLSVSLLCYNFLR 13 0 1 Unmodified _QLSVSLLCYNFLR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.929 2 806.929425 1611.8443 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.35 1 124.35 123.85 124.85 0 0 0 0 0.050423 1 82699 41.399 23.964 1 28757 925 10893 11187 44956 44956 QLTQTTHTDKVPGDEDK 17 2 0 Unmodified _QLTQTTHTDKVPGDEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.6561 3 638.313076 1911.9174 75430.59 0.07878 5.0286E-05 0.097811 6.2434E-05 0.17659 0.00011272 638.313447228984 643.655859522446 19.776 0.19888 19.776 19.689 19.888 0 30 7 5 0 0 0 0.00087806 2 6169 37.583 37.583 1 1.573 1.7994 0 17381000 6439700 10942000 28758 1569 10894 11188 44957;44958 44957 QLTQTTHTDKVPGDEDK 17 2 0 Unmodified _QLTQTTHTDKVPGDEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.6561 3 638.313076 1911.9174 74617.08 0.19722 0.00012589 0.072325 4.6166E-05 0.26954 0.00017205 638.313218373368 643.655968671004 21.701 0.6204 21.701 21.504 22.125 0 136 22 12 0 0 0 8.0038E-13 2 6640 114.52 114.52 1 3.8639 3.2818 0 42217000 8363500 33853000 28759 1569 10894 11188 44959;44960 44959 QLTQTTHTDKVPGDEDK 17 2 0 Unmodified _QLTQTTHTDKVPGDEDK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.6472 3 638.313076 1911.9174 75364.31 0.18723 0.00011951 0.16294 0.00010401 0.35017 0.00022352 638.313365316133 643.656034690105 21.589 0.66637 21.589 21.403 22.069 0 143 24 12 0 0 0 0.0043207 1 6108 32.181 32.181 1 3.9482 3.3572 0 32241000 6697100 25544000 28760 1569 10894 11188 44961 44961 QLTSYVGSVRPLVTELDPDAPIR 23 0 2 Unmodified _QLTSYVGSVRPLVTELDPDAPIR_ 0 0 1 P57740 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.4628 3 842.790261 2525.34895 67531.66 1.0161 0.00085637 -0.031442 -2.6499E-05 0.98467 0.00082987 843.124888914859 849.796699724984 126.28 0.27973 126.28 126.08 126.36 0 33 9 5 0 0 0 0.053642 1 75918 13.271 13.271 1 1.3771 1.1976 0 4776900 2263000 2513900 28761 1621 10895 11189 44962 44962 QLTVQMMQNPQILAALQER 19 0 1 2 Oxidation (M) _QLTVQM(ox)M(ox)QNPQILAALQER_ QLTVQM(1)M(1)QNPQILAALQER QLTVQM(58.49)M(58.49)QNPQILAALQER 0 2 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8VXI6;F8VUX1;F8W0J6;B7Z2V4;B7Z5H0;F8VVB5 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1123.5807 2 1122.57739 2243.14022 58954.47 0.45804 0.00051418 0.091477 0.00010269 0.54951 0.00061687 1122.57735044557 1128.082837527 102.03 0.50523 102.03 101.74 102.25 7.6294E-06 192 40 7 0 0 0 3.1016E-05 2 62731 58.487 58.487 1 1.9077 2.0047 0 11599000 3665500 7933300 28762 332 10896 11190 44963;44964 44964 252;253 QLTVQMMQNPQILAALQER 19 0 1 2 Oxidation (M) _QLTVQM(ox)M(ox)QNPQILAALQER_ QLTVQM(1)M(1)QNPQILAALQER QLTVQM(88.51)M(88.51)QNPQILAALQER 0 2 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8VXI6;F8VUX1;F8W0J6;B7Z2V4;B7Z5H0;F8VVB5 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1127.5801 2 1122.57739 2243.14022 58533.5 0.33625 0.00037747 -0.45667 -0.00051265 -0.12042 -0.00013518 1123.07874450168 1128.08290251427 101.37 0.53908 101.37 101.1 101.64 0 194 42 7 0 0 0 7.0201E-08 1 63695 88.507 88.507 1 2.084 2.0447 0 13848000 4870300 8977800 28763 332 10896 11190 44965 44965 252;253 QLTVQMMQNPQILAALQER 19 0 1 Unmodified _QLTVQMMQNPQILAALQER_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8VXI6;F8VUX1;F8W0J6;B7Z2V4;B7Z5H0;F8VVB5 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1107.0848 2 1106.58247 2211.15039 59160.34 0.41531 0.00045958 -0.43423 -0.00048051 -0.01892 -2.0937E-05 1107.08449516528 1111.58647406718 133.23 0.32538 133.23 133.03 133.35 1.5259E-05 73 15 7 0 0 0 0.0079694 2 81130 28.546 24.821 1 2.0326 1.7396 0 5966100 1795000 4171200 28764 332 10896 11191 44966;44967 44967 QLVAEQVTYQR 11 0 1 Unmodified _QLVAEQVTYQR_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.8615 2 667.856783 1333.69901 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.616 1 51.616 51.116 52.116 0 0 0 0 0.021612 1 28567 52.79 32.46 1 28765 955 10897 11192 44968 44968 QLVAEQVTYQR 11 0 1 Unmodified _QLVAEQVTYQR_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.8608 2 667.856783 1333.69901 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.629 1 51.629 51.129 52.129 0 0 0 0 3.4794E-05 1 28576 86.624 63.884 1 28766 955 10897 11192 44969 44969 QLVAEQVTYQR 11 0 1 Unmodified _QLVAEQVTYQR_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.8611 2 667.856783 1333.69901 NaN NaN NaN 0.38767 0.00025891 NaN NaN NaN NaN 50.377 0.17218 50.377 50.26 50.432 0 0 0 0 0.00049652 1 28404 90.15 66.195 1 NaN NaN 0 12001000 0 12001000 28767 955 10897 11192 44970 44970 QLVESDINSLRR 12 0 2 Unmodified _QLVESDINSLRR_ 0 0 1 CON__Q14525;Q14525 CON__Q14525 CON__Q14525 KRT33B Keratin, type I cuticular Ha3-II ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.4024 2 715.391522 1428.76849 NaN NaN NaN 1.8586 0.0013296 NaN NaN NaN NaN 88.262 0.16798 88.262 88.154 88.322 0 0 0 0 0.011002 1 54406 54.608 11.096 1 NaN NaN 0 6004800 0 6004800 + 28768 1169 10898 11193 44971 44971 QLWDTANTVK 10 1 0 Unmodified _QLWDTANTVK_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.3064 2 588.306395 1174.59824 80390 0.41175 0.00024223 0.10306 6.0632E-05 0.51481 0.00030286 588.306135264246 592.313591173664 69.955 0.41463 69.955 69.748 70.163 0 107 33 5 0 0 0 0.012313 1 35931 50.805 35.163 1 0.57048 0.44914 0 3869800 2259800 1610000 28769 1479 10899 11194 44972 44972 QLYEEEIR 8 0 1 Unmodified _QLYEEEIR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;F8W1U3;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.2761 2 540.272021 1078.52949 80615.89 0.48377 0.00026136 0.051129 2.7623E-05 0.53489 0.00028899 540.27194526688 545.276096677251 46.063 0.83485 46.063 45.625 46.46 -3.8147E-06 405 73 7 0 0 0 0.013193 2 24635 65.88 47.894 1 1.0439 1.1895 0 117580000 58275000 59308000 + 28770 1156 10900 11195 44973;44974 44974 QLYEEEIR 8 0 1 Unmodified _QLYEEEIR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;F8W1U3;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.2763 2 540.272021 1078.52949 82810.75 0.48803 0.00026367 -0.012561 -6.7865E-06 0.47547 0.00025688 540.27186329513 545.276152956662 45.033 0.70231 45.033 44.69 45.392 0 333 57 9 0 0 0 0.0010346 2 24589 113.5 78.006 1 1.0955 1.2529 0 158670000 80785000 77889000 + 28771 1156 10900 11195 44975;44976 44975 QLYEEEIR 8 0 1 Unmodified _QLYEEEIR_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;F8W1U3;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.2762 2 540.272021 1078.52949 80994.2 0.57426 0.00031026 -0.29546 -0.00015963 0.27881 0.00015063 540.271770056427 545.275829683975 53.375 0.9501 53.375 52.974 53.924 -3.8147E-06 293 71 6 0 0 0 0.017218 1 26385 60.59 40.886 1 1.8916 1.5628 0 11432000 4503400 6929000 + 28772 1156 10900 11195 44977 44977 QLYHLGVVEAYSGLTK 16 1 0 Unmodified _QLYHLGVVEAYSGLTK_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.6556 3 593.320955 1776.94104 78177.2 0.61336 0.00036392 0.32732 0.0001942 0.94068 0.00055812 593.321037095089 596.326966392226 106.24 0.57701 106.24 106 106.58 7.6294E-06 162 29 8 0 0 0 0.00012637 2 60672 50.077 50.077 1 1.5381 1.1912 0 13137000 4953700 8183300 28773 1691 10901 11196 44978;44979 44979 QLYHLGVVEAYSGLTK 16 1 0 Unmodified _QLYHLGVVEAYSGLTK_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.9925 3 593.320955 1776.94104 78086.05 0.64856 0.0003848 0.15077 8.9455E-05 0.79933 0.00047426 593.65538024125 595.992421726058 105.95 0.54341 105.95 105.73 106.27 0 175 30 8 0 0 0 0.00023251 2 59548 36.469 36.469 1 1.5807 1.2998 0 9975100 3525000 6450100 28774 1691 10901 11196 44980;44981 44980 QLYLNPK 7 1 0 Unmodified _QLYLNPK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.2599 2 438.252903 874.491253 91114.02 0.26429 0.00011582 -0.59816 -0.00026215 -0.33387 -0.00014632 438.252508338373 442.259671316467 42.664 0.42011 42.664 42.456 42.876 0 157 35 7 0 0 0 0.028171 1 22681 72.355 49.863 1 0.94461 1.0699 0 90400000 44219000 46181000 28775 908 10902 11197 44982 44982 QLYLNPK 7 1 0 Unmodified _QLYLNPK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 438.2529 2 438.252903 874.491253 91147.38 -0.28894 -0.00012663 -0.38222 -0.00016751 -0.67116 -0.00029414 438.25243687687 442.259786026666 48.075 0.63852 48.075 47.928 48.567 0 186 47 8 0 0 0 0.045076 2 23383 57.335 36.659 1 1.5954 1.3033 0 33627000 12304000 21324000 28776 908 10902 11197 44983;44984 44983 QLYQDYSDVQAQEPNVK 17 1 0 Unmodified _QLYQDYSDVQAQEPNVK_ 0 0 0 Q71F23;A8K8D2 Q71F23 Q71F23 CENPU Centromere protein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1016.9902 2 1012.98163 2023.9487 61308.63 0.18145 0.00018381 0.19444 0.00019697 0.37589 0.00038077 1012.98177039832 1016.9892729828 80.283 0.39614 80.283 80.06 80.456 -7.6294E-06 98 21 7 0 0 0 0.055399 1 42501 21.913 21.913 1 1.479 1.1982 0 2596500 1145100 1451500 28777 1866 10903 11198 44985 44985 QLYTVTMDVHSR 12 0 1 Oxidation (M) _QLYTVTM(ox)DVHSR_ QLYTVTM(1)DVHSR QLYTVTM(63.09)DVHSR 0 1 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.5781 3 489.241647 1464.70311 85774.17 0.53018 0.00025939 0.32666 0.00015982 0.85684 0.0004192 489.241853283657 492.577790342166 38.823 0.47718 38.823 38.591 39.068 0 168 39 6 0 0 0 0.00024597 1 19904 63.091 52.765 1 1.604 1.6522 0 24662000 8270300 16392000 28778 2023;1687 10904 11199 44986 44986 1504 QLYTVTMDVHSR 12 0 1 Oxidation (M) _QLYTVTM(ox)DVHSR_ QLYTVTM(1)DVHSR QLYTVTM(95.82)DVHSR 0 1 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3636 2 733.358833 1464.70311 77287.76 0.97438 0.00071457 1.1236 0.00082402 2.098 0.0015386 733.860851093936 738.36410055859 38.834 0.33875 38.834 38.615 38.953 0 81 27 4 0 0 0 4.8187E-05 1 20005 95.822 56.518 1 2.5702 2.5985 0 9663600 2986200 6677400 28779 2023;1687 10904 11199 44987 44987 1504 QLYTVTMDVHSR 12 0 1 Oxidation (M) _QLYTVTM(ox)DVHSR_ QLYTVTM(1)DVHSR QLYTVTM(84.69)DVHSR 0 1 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3628 2 733.358833 1464.70311 72659.77 0.45331 0.00033244 0.18166 0.00013322 0.63497 0.00046566 733.359030895709 738.363075582394 37.669 0.3577 37.669 37.438 37.795 0 88 27 5 0 0 0 0.00011105 2 19546 84.687 47.575 1 1.8507 1.8541 0 18497000 7131400 11366000 28780 2023;1687 10904 11199 44988;44989 44988 1504 QLYTVTMDVHSR 12 0 1 Oxidation (M) _QLYTVTM(ox)DVHSR_ QLYTVTM(1)DVHSR QLYTVTM(55.31)DVHSR 0 1 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.5782 3 489.241647 1464.70311 85995.48 0.10738 5.2534E-05 0.40832 0.00019977 0.5157 0.0002523 489.241777846794 492.577946863506 37.672 0.49331 37.672 37.414 37.908 0 161 38 6 0 0 0 0.00094349 1 19563 55.314 43.148 1 1.3911 1.5238 0 31729000 12230000 19499000 28781 2023;1687 10904 11199 44990 44990 1504 QLYTVTMDVHSR 12 0 1 Unmodified _QLYTVTMDVHSR_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.2456 3 483.910009 1448.7082 86269.63 0.18264 8.8383E-05 0.11463 5.547E-05 0.29727 0.00014385 483.909913084749 487.246190138259 67.799 0.58311 67.799 67.484 68.067 0 194 39 9 0 0 0 0.060026 1 35238 18.203 15.253 1 1.4633 1.2589 0 7602100 3469900 4132200 28782 2023;1687 10904 11200 44991 44991 QLYTVTMDVHSR 12 0 1 Unmodified _QLYTVTMDVHSR_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.861 2 725.361376 1448.7082 70476.91 0.6661 0.00048316 0.16275 0.00011805 0.82885 0.00060122 725.36036037477 730.365836742315 67.807 0.37597 67.807 67.58 67.956 0 106 24 7 0 0 0 0.014202 2 35322 54.259 31.618 1 1.5805 1.3214 0 3609200 1332200 2277000 28783 2023;1687 10904 11200 44992;44993 44993 QLYTVTMDVHSR 12 0 1 Unmodified _QLYTVTMDVHSR_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.9098 3 483.910009 1448.7082 86150.58 0.20328 9.8371E-05 -0.16613 -8.0393E-05 0.037152 1.7978E-05 483.909761202711 487.246180158598 68.22 0.4575 68.22 67.993 68.451 0 194 33 8 0 0 0 0.029285 2 34864 25.234 22.7 1 1.5643 1.2874 0 8490400 3251700 5238700 28784 2023;1687 10904 11200 44994;44995 44995 QLYTVTMDVHSR 12 0 1 Unmodified _QLYTVTMDVHSR_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.366 2 725.361376 1448.7082 69751.94 0.53812 0.00039033 0.019142 1.3885E-05 0.55727 0.00040422 725.86235855579 730.365806140402 68.217 0.41666 68.217 68.009 68.426 0 149 30 8 0 0 0 0.005775 1 34778 52.247 26.308 1 1.421 1.2145 0 4512700 1807300 2705400 28785 2023;1687 10904 11200 44996 44996 QMFFVISLDPPIK 13 1 0 Oxidation (M) _QM(ox)FFVISLDPPIK_ QM(1)FFVISLDPPIK QM(83.86)FFVISLDPPIK 0 1 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.9179 2 775.917995 1549.82144 68941.88 0.814 0.0006316 0.014003 1.0865E-05 0.828 0.00064246 775.918044199086 779.925043905847 124.89 0.65802 124.89 124.65 125.31 0 214 44 8 0 0 0 7.156E-05 3 81095 83.862 83.862 1 1.0657 1.0999 0 17281000 8104400 9176600 28786 167 10905 11201 44997;44998;44999 44998 139 QMFFVISLDPPIK 13 1 0 Oxidation (M) _QM(ox)FFVISLDPPIK_ QM(1)FFVISLDPPIK QM(84.69)FFVISLDPPIK 0 1 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.9265 2 775.917995 1549.82144 69481.62 1.0841 0.00084118 -0.14966 -0.00011613 0.93444 0.00072505 775.917859130656 779.925172004456 124.51 0.72619 124.51 124.21 124.93 7.6294E-06 267 47 8 0 0 0 7.3158E-05 3 82842 84.687 84.687 1 1.0955 1.1281 0 18100000 8502700 9597000 28787 167 10905 11201 45000;45001;45002 45001 139 QMLDPANYGTGMER 14 0 1 2 Oxidation (M) _QM(ox)LDPANYGTGM(ox)ER_ QM(1)LDPANYGTGM(1)ER QM(93.35)LDPANYGTGM(93.35)ER 0 2 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.8495 2 807.847972 1613.68139 67477.33 0.73975 0.00059761 -0.16651 -0.00013452 0.57324 0.00046309 807.847864428071 812.852235078513 42.478 0.58961 42.478 42.193 42.783 0 175 46 6 0 0 0 5.7679E-05 2 22617 93.345 93.345 1 2.4571 2.5467 0 22871000 5702300 17169000 28788 1569 10906 11202 45003;45004 45004 1338;1339 QMLDPANYGTGMER 14 0 1 2 Oxidation (M) _QM(ox)LDPANYGTGM(ox)ER_ QM(1)LDPANYGTGM(1)ER QM(75.85)LDPANYGTGM(75.85)ER 0 2 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.8528 2 807.847972 1613.68139 68398.58 0.60549 0.00048914 0.28507 0.0002303 0.89056 0.00071944 807.848866859406 812.852369165357 41.786 0.57832 41.786 41.512 42.09 0 204 51 6 0 0 0 0.00018561 2 22367 75.849 75.849 1 2.1724 2.1833 0 19214000 5491500 13722000 28789 1569 10906 11202 45005;45006 45005 1338;1339 QMLDPANYGTGMER 14 0 1 2 Oxidation (M) _QM(ox)LDPANYGTGM(ox)ER_ QM(1)LDPANYGTGM(1)ER QM(58.27)LDPANYGTGM(58.27)ER 0 2 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.8519 2 807.847972 1613.68139 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.064 1 42.064 41.564 42.564 0 0 0 0 0.0023542 1 22654 58.274 52.033 1 28790 1569 10906 11202 45007 45007 1338;1339 QMLDPANYGTGMER 14 0 1 2 Oxidation (M) _QM(ox)LDPANYGTGM(ox)ER_ QM(1)LDPANYGTGM(1)ER QM(52.25)LDPANYGTGM(52.25)ER 0 2 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.8484 2 807.847972 1613.68139 66715.13 0.45755 0.00036963 -0.26473 -0.00021386 0.19282 0.00015577 808.349358069176 812.852405487924 49.454 0.83075 49.454 49.005 49.836 0 335 68 8 0 0 0 0.0019584 1 24099 52.247 52.247 1 1.8221 1.5626 0 6200400 2281800 3918600 28791 1569 10906 11202 45008 45008 1338;1339 QMLDPANYGTGMER 14 0 1 Oxidation (M) _QMLDPANYGTGM(ox)ER_ QMLDPANYGTGM(1)ER QM(-41.11)LDPANYGTGM(41.11)ER 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.8558 2 799.850515 1597.68648 NaN NaN NaN 0.52225 0.00041772 NaN NaN NaN NaN 68.457 0.54063 68.457 68.23 68.77 0 0 0 0 0.010503 1 35748 41.109 31.454 2 NaN NaN 0 1695400 0 1695400 28792 1569 10906 11203 45009 45009 1338;1339 QMQLENVSVALEFLDR 16 0 1 Oxidation (M) _QM(ox)QLENVSVALEFLDR_ QM(1)QLENVSVALEFLDR QM(77.59)QLENVSVALEFLDR 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98;O75369;A0A024R321 P21333;O75369 P21333 FLNA;FLNB Filamin-A;Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 959.4856 2 954.480208 1906.94586 62215.44 0.74994 0.0007158 0.21406 0.00020432 0.964 0.00092012 954.481862060537 959.48490158939 123.54 0.40121 123.54 123.31 123.71 -7.6294E-06 77 28 6 0 0 0 5.9456E-05 3 80128 77.593 69.08 1 1.4766 1.5398 0 5051500 1721700 3329800 28793 1504;1402 10907 11204 45010;45011;45012 45012 1079 QMQLENVSVALEFLDR 16 0 1 Oxidation (M) _QM(ox)QLENVSVALEFLDR_ QM(1)QLENVSVALEFLDR QM(56.23)QLENVSVALEFLDR 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98;O75369;A0A024R321 P21333;O75369 P21333 FLNA;FLNB Filamin-A;Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.9879 2 954.480208 1906.94586 61238.47 0.99703 0.00095164 -0.0080675 -7.7003E-06 0.98896 0.00094394 954.479980606801 959.483505114671 123 0.44169 123 122.88 123.32 -7.6294E-06 105 32 6 0 0 0 0.00013496 2 81658 56.225 47.712 1 1.7853 1.7978 0 9346100 2634500 6711700 28794 1504;1402 10907 11204 45013;45014 45013 1079 QMVIDVLHPGK 11 1 0 Oxidation (M) _QM(ox)VIDVLHPGK_ QM(1)VIDVLHPGK QM(49.06)VIDVLHPGK 0 1 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.841 2 626.839548 1251.66454 76822.21 0.47795 0.0002996 0.22173 0.00013899 0.69967 0.00043858 626.839874193837 630.84652512341 67.355 0.64149 67.355 67.086 67.727 0 165 38 6 0 0 0 0.0048854 1 34244 49.06 49.06 1 0.51734 0.40573 0 3798500 2382200 1416300 28795 413 10908 11205 45015 45015 297 QMVIDVLHPGK 11 1 0 Unmodified _QMVIDVLHPGK_ 0 0 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.8428 2 618.842091 1235.66963 77569.17 0.49105 0.00030388 0.23764 0.00014706 0.72869 0.00045094 618.842603323192 622.849133879852 86.303 0.74342 86.303 86.026 86.77 0 173 42 6 0 0 0 0.032521 1 46558 49.06 49.06 1 1.0747 0.8744 0 7132900 3168100 3964900 28796 413 10908 11206 45016 45016 QNAEQHVTQLMSTEPLPR 18 0 1 Oxidation (M) _QNAEQHVTQLM(ox)STEPLPR_ QNAEQHVTQLM(1)STEPLPR QNAEQHVTQLM(73.79)STEPLPR 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.3504 3 699.012744 2094.0164 72764.81 0.80398 0.00056199 -0.46175 -0.00032277 0.34223 0.00023922 699.346498565438 702.682602411206 54.7 0.69173 54.7 54.344 55.036 3.8147E-06 227 57 6 0 0 0 4.673E-06 2 31191 73.788 73.788 1 1.1468 1.236 0 26004000 13255000 12749000 28797 2059 10909 11207 45017;45018 45017 1893 QNAEQHVTQLMSTEPLPR 18 0 1 Oxidation (M) _QNAEQHVTQLM(ox)STEPLPR_ QNAEQHVTQLM(1)STEPLPR QNAEQHVTQLM(60.09)STEPLPR 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.6845 3 699.012744 2094.0164 72319.52 0.5661 0.00039571 0.34289 0.00023968 0.90899 0.0006354 699.012869388864 702.683389450587 55.43 0.61603 55.43 55.153 55.769 0 240 44 7 0 0 0 1.0967E-05 2 31697 60.093 60.093 1 1.2204 1.3342 0 35526000 17080000 18446000 28798 2059 10909 11207 45019;45020 45019 1893 QNAEQHVTQLMSTEPLPR 18 0 1 Unmodified _QNAEQHVTQLMSTEPLPR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.0174 3 693.681105 2078.02149 71312.7 0.52379 0.00036334 -0.4558 -0.00031618 0.067994 4.7166E-05 694.015666595826 697.017209952261 91.906 0.55254 91.906 91.635 92.188 0 220 35 9 0 0 0 1.1438E-05 1 51094 61.957 61.957 1 2.1143 1.753 0 11091000 3717900 7373600 28799 2059 10909 11208 45021 45021 QNAHIVEWSPR 11 0 1 Unmodified _QNAHIVEWSPR_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 449.566 3 446.230071 1335.66838 89412.84 0.059396 2.6504E-05 0.08982 4.008E-05 0.14922 6.6585E-05 446.230344889059 449.566197363704 53.516 0.82322 53.516 52.995 53.818 0 201 60 7 0 0 0 0.034755 1 26527 20.857 18.332 1 1.2119 1.0113 0 10510000 4649300 5860800 28800 580 10910 11209 45022 45022 QNGDDPLLTYR 11 0 1 Unmodified _QNGDDPLLTYR_ 0 0 0 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3218 2 646.317491 1290.62043 82750.24 0.55448 0.00035837 -0.44681 -0.00028878 0.10767 6.9587E-05 647.321320430952 651.321069744661 67.284 0.54082 67.284 66.967 67.508 0 112 42 5 0 0 0 0.020958 1 39011 43.512 38.547 1 0.84646 0.86281 0 6884100 3779300 3104800 28801 1440 10911 11210 45023 45023 QNIFEFFER 9 0 1 Unmodified _QNIFEFFER_ 0 0 0 B2R5U7;C9J9W7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.3067 2 615.301113 1228.58767 80165.98 0.66623 0.00040994 -0.032933 -2.0264E-05 0.6333 0.00038967 615.301171156489 620.305224717324 117.7 0.53802 117.7 117.41 117.94 0 134 34 6 0 0 0 0.0022085 2 75301 75.378 67.811 1 1.1168 1.1382 0 6911800 2308400 4603400 28802 836;1683 10912 11211 45024;45025 45024 QNIFEFFER 9 0 1 Unmodified _QNIFEFFER_ 0 0 0 B2R5U7;C9J9W7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.3054 2 615.301113 1228.58767 80061.47 0.48325 0.00029735 0.3314 0.00020391 0.81465 0.00050126 615.3012375678 620.305396949614 117.12 0.53555 117.12 116.83 117.36 0 123 31 5 0 0 0 0.0022437 2 76630 74.92 63.769 1 1.1829 1.1676 0 12823000 6043000 6780200 28803 836;1683 10912 11211 45026;45027 45026 QNIFEFFER 9 0 1 Unmodified _QNIFEFFER_ 0 0 0 B2R5U7;C9J9W7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.8029 2 615.301113 1228.58767 77544.09 0.549 0.0003378 0.12962 7.9754E-05 0.67861 0.00041755 615.301310393514 620.305299944481 129.54 0.5759 129.54 129.28 129.86 0 115 25 6 0 0 0 0.016543 2 78341 53.775 46.394 1 1.1201 0.93644 0 3580200 1560300 2019900 28804 836;1683 10912 11211 45028;45029 45028 QNIFEFFER 9 0 1 Unmodified _QNIFEFFER_ 0 0 0 B2R5U7;C9J9W7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.3016 2 615.301113 1228.58767 NaN NaN NaN -0.075461 -4.6431E-05 NaN NaN NaN NaN 129.3 0.64465 129.3 129.03 129.67 0 0 0 0 0.037075 1 77254 51.193 40.363 1 NaN NaN 0 2155600 2155600 0 28805 836;1683 10912 11211 45030 45030 QNIGVATFIGLDK 13 1 0 Unmodified _QNIGVATFIGLDK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.3904 2 688.382634 1374.75072 73800.57 1.0341 0.00071183 0.048789 3.3585E-05 1.0828 0.00074541 688.3827756114 692.389449643849 108.7 0.5593 108.7 108.49 109.05 0 158 37 5 0 0 0 6.6521E-06 2 67979 104.3 94.864 1 0.86201 0.93819 0 48815000 24373000 24443000 28806 2070 10913 11212 45031;45032 45031 QNIGVATFIGLDK 13 1 0 Unmodified _QNIGVATFIGLDK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.3828 2 688.382634 1374.75072 74953.46 0.67919 0.00046754 0.23793 0.00016378 0.91712 0.00063133 688.382603607353 692.389740917686 108.15 0.57552 108.15 107.86 108.44 0 184 41 5 0 0 0 3.4455E-06 2 69155 108.35 95.166 1 0.79875 0.82151 0 32333000 17522000 14811000 28807 2070 10913 11212 45033;45034 45034 QNIGVATFIGLDK 13 1 0 Unmodified _QNIGVATFIGLDK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.39 2 688.382634 1374.75072 73772.84 0.68572 0.00047204 -0.076053 -5.2354E-05 0.60967 0.00041969 688.884471875396 692.389510287412 119.84 0.45592 119.84 119.59 120.05 0 83 18 6 0 0 0 0.00012078 1 70102 77.124 67.691 1 1.8001 1.4455 0 13984000 3719900 10264000 28808 2070 10913 11212 45035 45035 QNLAEMGLAVDPNR 14 0 1 Oxidation (M) _QNLAEM(ox)GLAVDPNR_ QNLAEM(1)GLAVDPNR QNLAEM(57.17)GLAVDPNR 0 1 0 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;B4E098;D6RC60 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.3845 2 772.380297 1542.74604 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.804 1 64.804 64.304 65.304 0 0 0 0 0.0014923 1 37268 57.175 37.932 1 28809 2135 10914 11213 45036 45036 1968 QNLAEMGLAVDPNR 14 0 1 Oxidation (M) _QNLAEM(ox)GLAVDPNR_ QNLAEM(1)GLAVDPNR QNLAEM(77.64)GLAVDPNR 0 1 0 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;B4E098;D6RC60 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.3865 2 772.380297 1542.74604 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.985 1 64.985 64.485 65.485 0 0 0 0 0.0004454 1 37392 77.64 40.084 1 28810 2135 10914 11213 45037 45037 1968 QNLAEMGLAVDPNR 14 0 1 Oxidation (M) _QNLAEM(ox)GLAVDPNR_ QNLAEM(1)GLAVDPNR QNLAEM(43.9)GLAVDPNR 0 1 0 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;B4E098;D6RC60 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.3848 2 772.380297 1542.74604 70345.57 0.79238 0.00061202 -0.42394 -0.00032744 0.36844 0.00028458 772.379999028784 777.3844786812 74.179 0.48257 74.179 73.898 74.381 0 142 31 7 0 0 0 0.0025976 1 39253 43.897 43.897 1 0.46289 0.39088 0 3003700 2018500 985240 28811 2135 10914 11213 45038 45038 1968 QNLAEMGLAVDPNR 14 0 1 Unmodified _QNLAEMGLAVDPNR_ 0 0 0 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;B4E098;D6RC60 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 764.3831 2 764.382839 1526.75113 70077.89 0.69472 0.00053103 -0.078593 -6.0075E-05 0.61612 0.00047095 764.382557163914 769.888863064223 99.284 0.44591 99.284 99.016 99.462 7.6294E-06 83 27 4 0 0 0 0.0019382 1 55279 50.116 43.733 1 0.97944 0.85834 0 2532500 1181600 1350900 28812 2135 10914 11214 45039 45039 QNLAMTGEVSLTGK 14 1 0 Oxidation (M) _QNLAM(ox)TGEVSLTGK_ QNLAM(1)TGEVSLTGK QNLAM(72.34)TGEVSLTGK 0 1 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;K7ERR6 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.3803 2 732.871773 1463.72899 NaN NaN NaN -0.58257 -0.00042695 NaN NaN NaN NaN 57.865 0.29183 57.865 57.764 58.056 -3.8147E-06 0 0 0 0.00040086 1 33543 72.34 54.028 1 NaN NaN 0 7434900 0 7434900 28813 946 10915 11215 45040 45040 771 QNLEPLFEQYINNLR 15 0 1 Unmodified _QNLEPLFEQYINNLR_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;F8W0C6 B2R853;CON__P04259;CON__P13647 CON__P13647 KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.9905 2 945.989057 1889.96356 NaN NaN NaN -0.26692 -0.0002525 NaN NaN NaN NaN 125.54 0.54274 125.54 125.26 125.8 0 0 0 0 2.7449E-07 1 81531 102.4 85.033 1 NaN NaN 0 12591000 12591000 0 + 28814 1162;859;1154 10916 11216 45041 45041 QNLEPLFEQYINNLR 15 0 1 Unmodified _QNLEPLFEQYINNLR_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;F8W0C6 B2R853;CON__P04259;CON__P13647 CON__P13647 KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 946.4916 2 945.989057 1889.96356 NaN NaN NaN -0.68564 -0.0006486 NaN NaN NaN NaN 125.13 0.53384 125.13 124.87 125.4 0 0 0 0 9.9535E-16 1 83242 122.51 97.657 1 NaN NaN 0 18378000 18378000 0 + 28815 1162;859;1154 10916 11216 45042 45042 QNLEPLFEQYINNLRR 16 0 2 Unmodified _QNLEPLFEQYINNLRR_ 0 0 1 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;F8W0C6 B2R853;CON__P04259;CON__P13647 CON__P13647 KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.3647 3 683.028834 2046.06467 NaN NaN NaN 0.91039 0.00062182 NaN NaN NaN NaN 116.09 0.45979 116.09 115.88 116.34 0 0 0 0 0.019233 1 75967 37.555 25.074 1 NaN NaN 0 7937000 7937000 0 + 28816 1162;859;1154 10917 11217 45043 45043 QNLEPLFEQYINNLRR 16 0 2 Unmodified _QNLEPLFEQYINNLRR_ 0 0 1 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;F8W0C6 B2R853;CON__P04259;CON__P13647 CON__P13647 KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 683.3647 3 683.028834 2046.06467 NaN NaN NaN -0.35752 -0.00024419 NaN NaN NaN NaN 128.68 0.91811 128.68 128.47 129.38 0 0 0 0 0.017756 1 77706 45.614 36.208 1 NaN NaN 0 12211000 12211000 0 + 28817 1162;859;1154 10917 11217 45044 45044 QNLEPLFEQYINNLRR 16 0 2 Unmodified _QNLEPLFEQYINNLRR_ 0 0 1 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;F8W0C6 B2R853;CON__P04259;CON__P13647 CON__P13647 KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.0291 3 683.028834 2046.06467 NaN NaN NaN -0.63113 -0.00043108 NaN NaN NaN NaN 128.41 0.74207 128.41 128.2 128.95 1.5259E-05 0 0 0 0.0019764 1 76647 45.723 38.011 1 NaN NaN 0 8870400 8870400 0 + 28818 1162;859;1154 10917 11217 45045 45045 QNLIEELRK 9 1 1 Unmodified _QNLIEELRK_ 0 0 1 A0A024RAE1;Q9UKD2;B4DHZ2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 387.563 3 381.555784 1141.64552 100692.2 0.26105 9.9603E-05 0.98813 0.00037703 1.2492 0.00047663 381.555949398384 387.563343199704 55.869 0.35061 55.869 55.724 56.075 0 66 25 5 0 0 0 0.033738 1 31452 26.043 2.8984 1 1.3257 1.4469 0 9412300 4417000 4995400 28819 302 10918 11218 45046 45046 QNLIEELRK 9 1 1 Unmodified _QNLIEELRK_ 0 0 1 A0A024RAE1;Q9UKD2;B4DHZ2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.8434 2 571.830037 1141.64552 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.851 1 55.851 55.351 56.351 0 0 0 0 0.01007 1 31430 76.221 40.777 1 28820 302 10918 11218 45047 45047 QNLIEELRK 9 1 1 Unmodified _QNLIEELRK_ 0 0 1 A0A024RAE1;Q9UKD2;B4DHZ2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.8304 2 571.830037 1141.64552 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.925 1 55.925 55.425 56.425 0 0 0 0 0.011102 1 31475 70.919 27.637 1 28821 302 10918 11218 45048 45048 QNLIEELRK 9 1 1 Unmodified _QNLIEELRK_ 0 0 1 A0A024RAE1;Q9UKD2;B4DHZ2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 381.5556 3 381.555784 1141.64552 102177.8 0.28829 0.00011 -0.03784 -1.4438E-05 0.25045 9.5559E-05 381.555556856716 387.563090590703 54.367 0.35746 54.367 54.222 54.579 0 75 28 4 0 0 0 0.025795 1 31010 26.043 6.281 1 0.97358 1.0862 0 11339000 5670700 5668600 28822 302 10918 11218 45049 45049 QNLLSVGDYR 10 0 1 Unmodified _QNLLSVGDYR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.8089 2 582.80402 1163.59349 77031.26 0.47428 0.00027641 0.4357 0.00025393 0.90998 0.00053034 582.803861649449 587.808497471518 74.919 0.79365 74.919 74.574 75.368 0 240 65 5 0 0 0 0.00089552 2 44040 79.489 52.359 1 2.6568 2.7178 0 34024000 10075000 23949000 28823 1391 10919 11219 45050;45051 45051 QNLLSVGDYR 10 0 1 Unmodified _QNLLSVGDYR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8085 2 582.80402 1163.59349 78478.41 0.43292 0.00025231 0.68872 0.00040139 1.1216 0.0006537 582.803977641973 587.808644288921 73.731 0.82972 73.731 73.384 74.213 -7.6294E-06 258 64 6 0 0 0 0.0013651 2 44327 73.985 58.104 1 2.5156 2.7891 0 42630000 13476000 29154000 28824 1391 10919 11219 45052;45053 45053 QNLLSVGDYR 10 0 1 Unmodified _QNLLSVGDYR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.8085 2 582.80402 1163.59349 78162.61 0.50096 0.00029196 0.23688 0.00013805 0.73784 0.00043002 582.804003550976 587.80828884841 85.465 0.80503 85.465 85.139 85.944 0 232 50 6 0 0 0 0.0012794 2 46687 74.376 54.599 1 5.0933 4.2656 0 24955000 4253800 20701000 28825 1391 10919 11219 45054;45055 45054 QNLLSVGDYR 10 0 1 Unmodified _QNLLSVGDYR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.8084 2 582.80402 1163.59349 78520.8 0.54179 0.00031576 0.37815 0.00022039 0.91994 0.00053614 582.804089400878 587.808404233955 85.618 0.78793 85.618 85.275 86.063 0 202 47 6 0 0 0 0.00089552 3 45993 79.489 63.86 1 5.0002 4.2827 0 20844000 3672300 17172000 28826 1391 10919 11219 45056;45057;45058 45057 QNLVPFR 7 0 1 Unmodified _QNLVPFR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.2543 2 437.250695 872.486836 90474.46 0.049763 2.1759E-05 0.3375 0.00014757 0.38726 0.00016933 437.250681067244 442.255032854416 64.786 1.0286 64.786 64.501 65.529 0 184 86 4 0 0 0 0.034211 1 38171 62.714 47.275 1 0.61156 0.60395 0 12732000 6966200 5765400 28827 1421 10920 11220 45059 45059 QNQTTSAVSTPASSETSK 18 1 0 Unmodified _QNQTTSAVSTPASSETSK_ 0 0 0 P49792 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.442 2 912.434509 1822.85446 NaN NaN NaN -0.42659 -0.00038924 NaN NaN NaN NaN 23.594 0.25067 23.594 23.45 23.701 0 0 0 0 0.0045055 1 9470 47.189 38.676 1 NaN NaN 0 2166400 0 2166400 28828 1588 10921 11221 45060 45060 QNRPIPQWIR 10 0 2 Unmodified _QNRPIPQWIR_ 0 0 1 Q59GN2;P62891 Q59GN2 Q59GN2 RPL39P5;RPL39 Putative 60S ribosomal protein L39-like 5;60S ribosomal protein L39 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.582 3 436.582556 1306.72584 88681.46 -0.34857 -0.00015218 0.29241 0.00012766 -0.056159 -2.4518E-05 436.582670878415 443.254778324778 58.336 0.66459 58.336 58.034 58.698 -3.8147E-06 274 53 9 0 0 0 6.2212E-06 2 32971 102.62 102.62 1 0.55532 0.60505 0 95726000 59528000 36198000 28829 1650 10922 11222 45061;45062 45061 QNRPIPQWIR 10 0 2 Unmodified _QNRPIPQWIR_ 0 0 1 Q59GN2;P62891 Q59GN2 Q59GN2 RPL39P5;RPL39 Putative 60S ribosomal protein L39-like 5;60S ribosomal protein L39 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.5823 3 436.582556 1306.72584 90147.54 0.1403 6.1254E-05 0.020282 8.855E-06 0.16059 7.0109E-05 436.582488899014 443.254760572496 56.567 0.6682 56.567 56.284 56.953 -3.8147E-06 255 48 8 0 0 0 9.8667E-10 1 32524 128.86 119.9 1 0.60766 0.70926 0 102520000 62324000 40195000 28830 1650 10922 11222 45063 45063 QNRPIPQWIR 10 0 2 Unmodified _QNRPIPQWIR_ 0 0 1 Q59GN2;P62891 Q59GN2 Q59GN2 RPL39P5;RPL39 Putative 60S ribosomal protein L39-like 5;60S ribosomal protein L39 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 436.5825 3 436.582556 1306.72584 89125.41 -0.088292 -3.8547E-05 0.10367 4.526E-05 0.015375 6.7126E-06 436.58261053733 443.254762994464 67.577 0.8985 67.577 67.23 68.128 0 391 63 9 0 0 0 0.025693 2 35088 35.511 35.511 1 0.67544 0.54886 0 44196000 26266000 17930000 28831 1650 10922 11222 45064;45065 45064 QNRPIPQWIR 10 0 2 Unmodified _QNRPIPQWIR_ 0 0 1 Q59GN2;P62891 Q59GN2 Q59GN2 RPL39P5;RPL39 Putative 60S ribosomal protein L39-like 5;60S ribosomal protein L39 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.2548 3 436.582556 1306.72584 89782.22 -0.096411 -4.2092E-05 -0.11024 -4.8129E-05 -0.20665 -9.0221E-05 436.582522550871 443.254722133216 67.786 1.0376 67.786 67.4 68.437 0 434 74 9 0 0 0 0.034094 2 34487 33.19 33.19 1 0.66379 0.61779 0 29814000 18219000 11595000 28832 1650 10922 11222 45066;45067 45067 QPAIISQLDPVNER 14 0 1 Unmodified _QPAIISQLDPVNER_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.4262 2 790.425562 1578.83657 67714.05 0.77744 0.00061451 -0.1111 -8.7813E-05 0.66635 0.0005267 790.424654570113 795.43030134118 92.765 0.69313 92.765 92.406 93.1 0 269 63 6 0 0 0 0.0091924 2 56116 37.426 36.303 1 1.4219 1.4517 0 30985000 13412000 17573000 28833 1691 10923 11223 45068;45069 45069 QPAIISQLDPVNER 14 0 1 Unmodified _QPAIISQLDPVNER_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.422 2 790.425562 1578.83657 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.02 1 122.02 121.52 122.52 0 0 0 0 0.017671 1 78942 45.257 31.099 1 28834 1691 10923 11223 45070 45070 QPAIISQLDPVNER 14 0 1 Unmodified _QPAIISQLDPVNER_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.9256 2 790.425562 1578.83657 67560.13 1.0136 0.00080114 -0.51105 -0.00040395 0.5025 0.00039719 790.92599284409 795.4299485623 91.954 0.6599 91.954 91.688 92.347 0 280 57 7 0 0 0 0.0042559 1 56890 45.764 45.764 1 1.4566 1.5907 0 38331000 15276000 23055000 28835 1691 10923 11223 45071 45071 QPCPSESDIITEEDK 15 1 0 Unmodified _QPCPSESDIITEEDK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.3888 2 874.388181 1746.76181 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.676 1 55.676 55.176 56.176 3.8147E-06 0 0 0 0.00023603 1 31312 84.169 76.282 1 28836 1405 10924 11224 45072 45072 QPCPSESDIITEEDK 15 1 0 Unmodified _QPCPSESDIITEEDK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.3891 2 874.388181 1746.76181 NaN NaN NaN 0.067198 5.8757E-05 NaN NaN NaN NaN 54.977 0.37664 54.977 54.765 55.141 0 0 0 0 3.71E-05 1 31398 85.554 75.55 1 NaN NaN 0 5019700 5019700 0 28837 1405 10924 11224 45073 45073 QPCPSESDIITEEDK 15 1 0 Unmodified _QPCPSESDIITEEDK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 874.3888 2 874.388181 1746.76181 63512.73 0.66165 0.00057853 -0.20178 -0.00017643 0.45987 0.0004021 874.388158072419 878.395003822614 65.445 0.73558 65.445 65.115 65.851 0 353 54 9 0 0 0 0.00022275 2 33784 67.997 61.109 1 1.2124 0.96189 0 18871000 8396600 10474000 28838 1405 10924 11224 45074;45075 45075 QPCPSESDIITEEDK 15 1 0 Unmodified _QPCPSESDIITEEDK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 874.3889 2 874.388181 1746.76181 64057.45 0.14466 0.00012649 0.079726 6.9712E-05 0.22438 0.0001962 874.388411597192 878.395255104761 66.152 0.74964 66.152 65.804 66.554 0 356 54 9 0 0 0 0.0028445 1 33478 43.761 36.873 1 1.2379 0.99377 0 14041000 6378300 7662800 28839 1405 10924 11224 45076 45076 QPDSPTALYHFNASLYLLR 19 0 1 Unmodified _QPDSPTALYHFNASLYLLR_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.3862 3 736.047894 2205.12185 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.25 1 115.25 114.75 115.75 -7.6294E-06 0 0 0 0.0036734 1 75152 55.589 46.219 1 28840 1997 10925 11225 45077 45077 QPDSPTALYHFNASLYLLR 19 0 1 Unmodified _QPDSPTALYHFNASLYLLR_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.3839 3 736.047894 2205.12185 70329.36 0.69502 0.00051157 0.18915 0.00013923 0.88418 0.0006508 736.382820086949 739.384197244263 127 0.93339 127 126.51 127.44 -7.6294E-06 154 38 9 0 0 0 0.00010786 2 76462 43.12 43.12 1 0.76914 0.65454 0 5401500 2800700 2600800 28841 1997 10925 11225 45078;45079 45078 QPDSPTALYHFNASLYLLR 19 0 1 Unmodified _QPDSPTALYHFNASLYLLR_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.7189 3 736.047894 2205.12185 70779.27 0.68422 0.00050362 0.098473 7.248E-05 0.78269 0.0005761 736.382590849509 739.71817082194 126.81 0.95924 126.81 126.28 127.24 0 142 41 8 0 0 0 0.0035668 2 75439 24.407 24.407 1 0.96168 0.79789 0 5638900 2603900 3035000 28842 1997 10925 11225 45080;45081 45081 QPEDDLFDR 9 0 1 Unmodified _QPEDDLFDR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.7571 2 567.756735 1133.49892 80609.9 0.64319 0.00036518 -0.087629 -4.9752E-05 0.55557 0.00031543 567.756629810444 572.760698748942 56.794 0.82998 56.794 56.413 57.243 0 413 70 8 0 0 0 0.0019674 2 32034 78.516 78.516 1 1.0493 1.1623 0 63368000 29891000 33477000 28843 1470 10926 11226 45082;45083 45083 QPEDDLFDR 9 0 1 Unmodified _QPEDDLFDR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.7607 2 567.756735 1133.49892 80403.87 0.47214 0.00026806 -0.026037 -1.4783E-05 0.4461 0.00025328 567.756798653202 572.760701056705 55.909 0.90777 55.909 55.442 56.35 0 374 71 7 0 0 0 0.005479 2 32009 66.621 66.621 1 1.0377 1.1854 0 90694000 44758000 45936000 28844 1470 10926 11226 45084;45085 45085 QPEDDLFDR 9 0 1 Unmodified _QPEDDLFDR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.7612 2 567.756735 1133.49892 80159.21 0.64971 0.00036888 -0.034351 -1.9503E-05 0.61536 0.00034937 567.756595123091 572.760805674451 65.301 1.2013 65.301 64.81 66.012 0 531 92 8 0 0 0 0.0019814 2 33669 78.334 78.334 1 1.3902 1.1552 0 21352000 9263800 12089000 28845 1470 10926 11226 45086;45087 45087 QPEDDLFDR 9 0 1 Unmodified _QPEDDLFDR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.757 2 567.756735 1133.49892 80440.82 0.34429 0.00019547 0.14916 8.4689E-05 0.49346 0.00028016 567.756748568314 572.760898487123 65.8 1.2136 65.8 65.274 66.487 0 509 90 8 0 0 0 0.010772 3 33133 58.981 58.981 1 1.4737 1.2465 0 18186000 7290500 10895000 28846 1470 10926 11226 45088;45089;45090 45088 QPEDDLFDRLNTGILNK 17 1 1 Unmodified _QPEDDLFDRLNTGILNK_ 0 0 1 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.3412 3 663.340966 1987.00107 73513.33 0.59053 0.00039172 -0.050937 -3.3789E-05 0.53959 0.00035793 663.34093150264 669.682749414921 117.2 0.56219 117.2 116.99 117.56 -7.6294E-06 137 25 8 0 0 0 0.042114 1 68169 19.819 19.819 1 1.5149 1.2855 0 20614000 7718200 12896000 28847 1470 10927 11227 45091 45091 QPLPSAPENNPEEELASK 18 1 0 Unmodified _QPLPSAPENNPEEELASK_ 0 0 0 O14965;A3KFJ0;B2R6Z3;Q5QPD4;A3KFJ1;Q5QPD2 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.9839 2 975.476177 1948.9378 64237.61 -0.17066 -0.00016647 0.58555 0.00057119 0.41489 0.00040471 975.978593306646 979.985095258696 72.548 0.27126 72.548 72.34 72.611 0 39 18 4 0 0 0 0.011961 1 42368 27.664 22.17 1 1.1485 1.1445 0 7928900 2345600 5583400 28848 1369 10928 11228 45092 45092 QPPVSPGTALVGSQK 15 1 0 Unmodified _QPPVSPGTALVGSQK_ 0 0 0 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.4047 2 733.404098 1464.79364 71010.08 0.53112 0.00038953 0.20726 0.000152 0.73838 0.00054153 733.404265397543 737.411340974143 59.208 0.49251 59.208 58.984 59.476 0 219 37 7 0 0 0 1.6269E-05 1 33611 88.275 88.275 1 0.79257 0.93902 0 461550000 250120000 211430000 28849 372 10929 11229 45093 45093 QPPVSPGTALVGSQK 15 1 0 Unmodified _QPPVSPGTALVGSQK_ 0 0 0 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.4026 2 733.404098 1464.79364 71340.55 0.6969 0.00051111 0.44545 0.0003267 1.1424 0.00083781 733.404491960044 737.411505769632 58.179 0.4304 58.179 57.944 58.374 0 181 31 8 0 0 0 0.028762 1 33638 27.862 23.249 1 0.76406 0.90118 0 774290000 428000000 346290000 28850 372 10929 11229 45094 45094 QPPVSPGTALVGSQK 15 1 0 Unmodified _QPPVSPGTALVGSQK_ 0 0 0 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.4042 2 733.404098 1464.79364 71504.22 0.55018 0.0004035 0.45412 0.00033305 1.0043 0.00073656 733.404399377296 737.411495897233 68.471 0.86434 68.471 68.164 69.028 0 314 64 7 0 0 0 0.018325 1 35669 31.881 31.881 1 0.36545 0.30715 0 53704000 38946000 14758000 28851 372 10929 11229 45095 45095 QPPVSPGTALVGSQK 15 1 0 Unmodified _QPPVSPGTALVGSQK_ 0 0 0 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 733.9059 2 733.404098 1464.79364 71834.27 0.57583 0.00042232 0.14921 0.00010943 0.72504 0.00053175 733.404223030031 737.411210074291 68.974 0.90428 68.974 68.635 69.539 0 330 63 9 0 0 0 0.0020323 2 35197 46.069 46.069 1 0.36006 0.30121 0 44809000 32957000 11852000 28852 372 10929 11229 45096;45097 45097 QPPVSPGTALVGSQKEPSEVPTPK 24 2 0 Unmodified _QPPVSPGTALVGSQKEPSEVPTPK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.1019 3 810.767345 2429.2802 68988.33 0.74872 0.00060704 -0.25715 -0.00020849 0.49157 0.00039855 811.101318854692 816.44456913323 75.605 0.57544 75.605 75.332 75.907 0 219 49 6 0 0 0 0.026445 2 44369 19.044 19.044 1 0.7889 0.93859 0 23236000 12165000 11071000 28853 372 10930 11230 45098;45099 45098 QPPVSPGTALVGSQKEPSEVPTPK 24 2 0 Unmodified _QPPVSPGTALVGSQKEPSEVPTPK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.1019 3 810.767345 2429.2802 68597.27 0.64372 0.0005219 0.12864 0.0001043 0.77236 0.0006262 811.101890418358 816.444461563674 74.246 0.54321 74.246 73.98 74.523 0 270 46 8 0 0 0 0.0015756 1 44695 26.443 26.443 1 0.77476 0.89418 0 30143000 16404000 13739000 28854 372 10930 11230 45100 45100 QPPVSPGTALVGSQKEPSEVPTPK 24 2 0 Unmodified _QPPVSPGTALVGSQKEPSEVPTPK_ 0 0 1 B4DWA0;A0A024RCT9;P17096 B4DWA0 B4DWA0 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.1016 3 810.767345 2429.2802 67082.32 0.59768 0.00048458 0.06281 5.0924E-05 0.66049 0.0005355 811.101791881444 816.444317266865 86.378 0.63203 86.378 86.063 86.695 0 254 35 9 0 0 0 0.045145 1 46457 15.05 15.05 1 0.38579 0.32567 0 9373300 6293800 3079500 28855 372 10930 11230 45101 45101 QPSLHMSAAAASR 13 0 1 Oxidation (M) _QPSLHM(ox)SAAAASR_ QPSLHM(1)SAAAASR QPSLHM(48.7)SAAAASR 0 1 0 A0A024R534;O94776;E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8;E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q86TR6 A0A024R534;E7EQY4;E7ESY4 A0A024R534 MTA2;MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.5588 3 448.222587 1341.64593 90150.28 0.15449 6.9244E-05 -0.20327 -9.1111E-05 -0.048786 -2.1867E-05 448.222549887475 451.55866651634 18.403 0.29685 18.403 18.21 18.507 1.9073E-06 61 13 7 0 0 0 0.0010682 1 5289 48.704 39.883 1 0.93935 0.98614 0 11882000 5257800 6623900 28856 168;1223;1221 10931 11231 45102 45102 144 QPSLHMSAAAASR 13 0 1 Oxidation (M) _QPSLHM(ox)SAAAASR_ QPSLHM(1)SAAAASR QPSLHM(45.43)SAAAASR 0 1 0 A0A024R534;O94776;E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8;E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q86TR6 A0A024R534;E7EQY4;E7ESY4 A0A024R534 MTA2;MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.8303 2 671.830243 1341.64593 75266.45 0.69751 0.00046861 0.030593 2.0553E-05 0.7281 0.00048916 671.830384354848 676.834302173415 18.406 0.23549 18.406 18.24 18.476 0 38 10 5 0 0 0 0.0034464 1 5325 45.433 45.433 1 0.95352 0.9989 0 12507000 6164200 6343200 28857 168;1223;1221 10931 11231 45103 45103 144 QPSLHMSAAAASR 13 0 1 Oxidation (M) _QPSLHM(ox)SAAAASR_ QPSLHM(1)SAAAASR QPSLHM(43.81)SAAAASR 0 1 0 A0A024R534;O94776;E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8;E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q86TR6 A0A024R534;E7EQY4;E7ESY4 A0A024R534 MTA2;MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.5581 3 448.222587 1341.64593 87013.57 -0.11339 -5.0822E-05 -0.12669 -5.6787E-05 -0.24008 -0.00010761 448.222469431565 451.558653125445 18.367 0.186 18.367 18.249 18.435 0 24 5 7 0 0 0 0.0021656 1 5043 43.813 37.084 1 0.89852 0.89127 0 15885000 7712200 8173000 28858 168;1223;1221 10931 11231 45104 45104 144 QPSYPSVK 8 1 0 Unmodified _QPSYPSVK_ 0 0 0 Q9BYG3;C9J808;C9J6C5;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.24 2 453.239993 904.465432 90624 0.20293 9.1974E-05 -0.32687 -0.00014815 -0.12395 -5.6179E-05 453.239335739822 457.246997001471 27.933 0.79541 27.933 27.467 28.262 1.9073E-06 169 55 6 0 0 0 0.034378 1 13057 49.442 49.442 1 1.0125 0.99687 0 24129000 11751000 12377000 28859 2019 10932 11232 45105 45105 QPTIFQNK 8 1 0 Unmodified _QPTIFQNK_ 0 0 0 P62280;M0QZC5;M0R1H6 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.267 2 488.266542 974.51853 85603.72 0.51199 0.00024999 0.54072 0.00026401 1.0527 0.000514 488.266620276234 492.273986430595 38.102 0.81915 38.102 37.612 38.431 0 330 68 6 0 0 0 0.0022282 2 19625 101.69 70.401 1 0.91468 1.0368 0 92905000 49074000 43830000 28860 1641 10933 11233 45106;45107 45106 QPTIFQNK 8 1 0 Unmodified _QPTIFQNK_ 0 0 0 P62280;M0QZC5;M0R1H6 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2747 2 488.266542 974.51853 86480.38 0.29557 0.00014432 0.87119 0.00042537 1.1668 0.00056969 488.26707750484 492.273853918553 37.304 0.91889 37.304 36.696 37.615 0 346 72 7 0 0 0 0.036173 1 19097 48.787 35.068 1 0.95411 1.0667 0 105500000 58904000 46593000 28861 1641 10933 11233 45108 45108 QPTIFQNK 8 1 0 Unmodified _QPTIFQNK_ 0 0 0 P62280;M0QZC5;M0R1H6 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.2668 2 488.266542 974.51853 85621.78 0.16734 8.1707E-05 0.29524 0.00014416 0.46258 0.00022586 488.26672893175 492.273633863607 42.701 1.5411 42.701 42.169 43.71 0 455 105 9 0 0 0 0.032028 2 19841 50.898 41.382 1 1.1026 0.94189 0 66264000 31974000 34289000 28862 1641 10933 11233 45109;45110 45109 QPTIFQNK 8 1 0 Unmodified _QPTIFQNK_ 0 0 0 P62280;M0QZC5;M0R1H6 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.2675 2 488.266542 974.51853 85900.76 -0.07321 -3.5746E-05 0.30637 0.00014959 0.23316 0.00011385 488.26671688867 492.273638465196 42.706 1.3609 42.706 42.144 43.505 0 413 90 9 0 0 0 0.031214 1 19329 51.43 28.539 1 1.0844 0.91617 0 57217000 27319000 29898000 28863 1641 10933 11233 45111 45111 QPVTDPLLTPVEK 13 1 0 Unmodified _QPVTDPLLTPVEK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.9033 2 718.903399 1435.79225 NaN NaN NaN -0.30363 -0.00021828 NaN NaN NaN NaN 85.77 0.23237 85.77 85.585 85.817 7.6294E-06 0 0 0 0.050699 1 52771 40.015 22.542 1 NaN NaN 0 11421000 11421000 0 28864 2008 10934 11234 45112 45112 QPVTDPLLTPVEK 13 1 0 Unmodified _QPVTDPLLTPVEK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.9108 2 718.903399 1435.79225 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.676 1 85.676 85.176 86.176 0 0 0 0 0.0043721 1 52757 60.691 38.161 1 28865 2008 10934 11234 45113 45113 QPYAVSELAGHQTSAESWGTGR 22 0 1 Unmodified _QPYAVSELAGHQTSAESWGTGR_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.7102 3 778.036605 2331.08799 68596 0.63611 0.00049492 0.14661 0.00011407 0.78272 0.00060899 778.371102374614 781.707366643348 73.141 0.67564 73.141 72.825 73.5 0 374 60 9 0 0 0 1.87E-07 3 42754 52.91 52.91 1 0.73072 0.80982 0 64842000 41402000 23440000 28866 1548 10935 11235 45114;45115;45116 45114 QPYAVSELAGHQTSAESWGTGR 22 0 1 Unmodified _QPYAVSELAGHQTSAESWGTGR_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.371 3 778.036605 2331.08799 68754.09 0.77324 0.00060161 -0.079191 -6.1614E-05 0.69405 0.00053999 778.371097238336 781.707317357609 71.856 0.60055 71.856 71.546 72.146 0 304 50 8 0 0 0 1.3894E-17 4 43039 112.36 112.36 1 0.7724 0.89067 0 72122000 40086000 32036000 28867 1548 10935 11235 45117;45118;45119;45120 45119 QPYAVSELAGHQTSAESWGTGR 22 0 1 Unmodified _QPYAVSELAGHQTSAESWGTGR_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.3723 3 778.036605 2331.08799 68399.61 0.63852 0.00049679 0.01209 9.4067E-06 0.65061 0.0005062 778.370959285177 781.707007689865 83.955 0.58933 83.955 83.695 84.284 0 395 49 11 0 0 0 4.2094E-09 2 45724 58.904 58.904 1 1.0463 0.90037 0 52083000 25434000 26649000 28868 1548 10935 11235 45121;45122 45122 QPYAVSELAGHQTSAESWGTGR 22 0 1 Unmodified _QPYAVSELAGHQTSAESWGTGR_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 781.3726 3 778.036605 2331.08799 68718.04 0.79436 0.00061804 -0.18939 -0.00014735 0.60497 0.00047069 778.370836232865 781.372411816634 84.094 0.65459 84.094 83.811 84.466 7.6294E-06 394 52 9 0 0 0 0.018453 2 44960 19.113 19.113 1 1.0025 0.87449 0 36132000 19966000 16166000 28869 1548 10935 11235 45123;45124 45124 QQAAQAFIHNSLYGPGTNR 19 0 1 Unmodified _QQAAQAFIHNSLYGPGTNR_ 0 0 0 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.6806 3 691.680205 2072.01878 72996.8 0.68584 0.00047438 0.054461 3.767E-05 0.7403 0.00051205 692.014715070984 695.350756744813 70.359 0.53258 70.359 70.143 70.676 0 235 45 8 0 0 0 0.00021569 1 41030 36.856 21.09 1 0.94391 0.94915 0 17342000 9560900 7780900 28870 30 10936 11236 45125 45125 QQAAQAFIHNSLYGPGTNR 19 0 1 Unmodified _QQAAQAFIHNSLYGPGTNR_ 0 0 0 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.6821 3 691.680205 2072.01878 70863.88 0.33155 0.00022933 0.10047 6.9492E-05 0.43202 0.00029882 692.014724789849 695.016396254921 80.543 0.91231 80.543 80.06 80.972 0 383 62 9 0 0 0 0.00093766 2 43420 34.174 34.174 1 1.0226 0.83613 0 13735000 7356800 6378100 28871 30 10936 11236 45126;45127 45127 QQAAQAFIHNSLYGPGTNR 19 0 1 Unmodified _QQAAQAFIHNSLYGPGTNR_ 0 0 0 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 691.6818 3 691.680205 2072.01878 72695.58 0.51855 0.00035867 -0.13401 -9.2691E-05 0.38454 0.00026598 692.014542855005 695.016303199735 80.636 0.84487 80.636 80.236 81.081 0 342 58 8 0 0 0 0.00061046 3 42888 35.389 29.809 1 0.98933 0.79869 0 10872000 5336000 5536100 28872 30 10936 11236 45128;45129;45130 45130 QQASHYLYVR 10 0 1 Unmodified _QQASHYLYVR_ 0 0 0 Q9Y3A4;A0A024R4U1 Q9Y3A4 Q9Y3A4 RRP7A;hCG_2044797 Ribosomal RNA-processing protein 7 homolog A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.8297 2 632.825286 1263.63602 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.177 1 34.177 33.677 34.677 0 0 0 0 0.033075 1 17267 49.418 36.791 1 28873 2133 10937 11237 45131 45131 QQASHYLYVR 10 0 1 Unmodified _QQASHYLYVR_ 0 0 0 Q9Y3A4;A0A024R4U1 Q9Y3A4 Q9Y3A4 RRP7A;hCG_2044797 Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 422.2191 3 422.219283 1263.63602 92222.41 -0.43563 -0.00018393 0.42012 0.00017738 -0.015509 -6.5482E-06 422.219497347403 425.555462912316 40.522 0.42824 40.522 40.331 40.759 0 145 33 6 0 0 0 0.025756 1 18682 36.424 27.42 1 1.2437 1.0574 0 9112900 3650600 5462300 28874 2133 10937 11237 45132 45132 QQDGELVGYR 10 0 1 Unmodified _QQDGELVGYR_ 0 0 0 Q53QW0;A0A087WZQ5;Q1RMG3;E9PHX8;B2RE75;Q12866 Q53QW0 Q53QW0 MERTK Receptor protein-tyrosine kinase;Tyrosine-protein kinase Mer ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.7859 2 582.785827 1163.5571 NaN NaN NaN -0.061104 -3.561E-05 NaN NaN NaN NaN 29.312 0.30986 29.312 29.174 29.484 0 0 0 0 0.0031546 1 14142 77.674 43.878 1 NaN NaN 0 15181000 15181000 0 28875 440 10938 11238 45133 45133 QQEELDALK 9 1 0 Unmodified _QQEELDALK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.2844 2 537.277303 1072.54005 81188.85 0.72337 0.00038865 0.22231 0.00011944 0.94568 0.00050809 537.277400376716 541.284271929181 43.056 0.3605 43.056 42.876 43.237 0 137 27 9 0 0 0 0.00085417 1 22955 93.429 70.937 1 0.85347 0.93087 0 50106000 28374000 21732000 28876 69 10939 11239 45134 45134 QQEELDALK 9 1 0 Unmodified _QQEELDALK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.2849 2 537.277303 1072.54005 78367.08 0.64882 0.0003486 -0.40512 -0.00021766 0.2437 0.00013093 537.277232724969 541.28408240787 42.225 0.89201 42.225 41.759 42.651 0 250 78 4 0 0 0 0.030744 1 22578 45.738 30.197 1 0.8597 0.87145 0 29446000 14348000 15097000 28877 69 10939 11239 45135 45135 QQEELDALK 9 1 0 Unmodified _QQEELDALK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.2842 2 537.277303 1072.54005 81160.27 0.25477 0.00013688 -0.090802 -4.8786E-05 0.16397 8.8096E-05 537.277230252929 541.284209515312 49.791 1.0635 49.791 49.255 50.318 0 284 84 5 0 0 0 0.049868 1 23786 38.086 28.872 1 1.7334 1.4151 0 5666900 1847400 3819500 28878 69 10939 11239 45136 45136 QQEELDALKK 10 2 0 Unmodified _QQEELDALKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 401.219 3 401.218949 1200.63502 94411.38 0.24759 9.9338E-05 0.55278 0.00022178 0.80037 0.00032112 401.218965030395 406.562024623859 28.207 0.26498 28.207 28.079 28.344 0 84 18 6 0 0 0 0.031089 1 13237 26.786 20.944 1 0.78941 0.93215 0 34411000 19631000 14780000 28879 69 10940 11240 45137 45137 QQEELDALKK 10 2 0 Unmodified _QQEELDALKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.3251 2 601.324785 1200.63502 77401.4 0.85107 0.00051177 -0.044925 -2.7015E-05 0.80615 0.00048476 601.324881738046 609.338845871244 28.209 0.22459 28.209 28.106 28.331 0 41 15 5 0 0 0 0.0019261 2 13271 89.698 61.299 1 0.73302 0.8714 0 17178000 8496700 8680900 28880 69 10940 11240 45138;45139 45138 QQEELDALKK 10 2 0 Unmodified _QQEELDALKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 406.5615 3 401.218949 1200.63502 94249.4 -0.14142 -5.6742E-05 -0.03767 -1.5114E-05 -0.17909 -7.1856E-05 401.218847018205 406.561683728393 31.936 0.56155 31.936 31.708 32.269 -1.9073E-06 160 30 8 0 0 0 0.049721 1 13548 15.864 14.632 1 1.8601 1.5867 0 18381000 6627100 11754000 28881 69 10940 11240 45140 45140 QQEELDALKK 10 2 0 Unmodified _QQEELDALKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 609.3387 2 601.324785 1200.63502 78349.55 0.29917 0.0001799 0.30038 0.00018062 0.59954 0.00036052 601.324830644469 609.339068268118 31.917 0.45322 31.917 31.708 32.161 0 125 24 8 0 0 0 0.0042129 1 13604 68.735 56.887 1 1.8699 1.6028 0 8396100 2763900 5632100 28882 69 10940 11240 45141 45141 QQEELDALKK 10 2 0 Unmodified _QQEELDALKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.3394 2 601.324785 1200.63502 78556.38 0.53151 0.00031961 -0.14412 -8.6663E-05 0.38739 0.00023295 601.324561981304 609.338833097862 31.972 0.44318 31.972 31.738 32.181 1.9073E-06 122 23 8 0 0 0 0.0012812 1 13139 81.594 56.457 1 1.9288 1.6268 0 8112800 2911300 5201600 28883 69 10940 11240 45142 45142 QQEELLAEENQR 12 0 1 Unmodified _QQEELLAEENQR_ 0 0 0 Q15149;D3DWL0;H0YDN1 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.8619 2 743.860251 1485.70595 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.764 1 39.764 39.264 40.264 0 0 0 0 0.024309 1 21133 48.998 35.645 1 28884 1754 10941 11241 45143 45143 QQELDNLLHEK 11 1 0 Unmodified _QQELDNLLHEK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.2375 3 456.236891 1365.68884 91202.35 0.36558 0.00016679 0.24994 0.00011403 0.61552 0.00028082 456.236878141387 458.908398360474 59.515 0.2527 59.516 59.436 59.688 3.8147E-06 92 19 6 0 0 0 0.0027153 1 33920 40.475 38.932 1 1.0534 1.1405 0 43503000 21324000 22179000 28885 1698 10942 11242 45144 45144 QQEVEAITLELEELK 15 1 0 Unmodified _QQEVEAITLELEELK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.4723 2 886.469832 1770.92511 64325.44 0.98543 0.00087356 0.49262 0.0004367 1.4781 0.0013103 886.469868755608 890.478279354048 119.33 0.50001 119.33 119.11 119.61 0 213 32 8 0 0 0 2.8721E-07 3 76709 135.02 135.02 1 0.79759 0.86883 0 49462000 27383000 22079000 28886 69 10943 11243 45145;45146;45147 45147 QQEVEAITLELEELK 15 1 0 Unmodified _QQEVEAITLELEELK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.4729 2 886.469832 1770.92511 63970.45 0.55544 0.00049238 0.34856 0.00030899 0.904 0.00080137 886.468931057778 890.478273836089 118.85 0.5045 118.85 118.61 119.12 0 199 31 8 0 0 0 0.00022478 3 78171 93.649 93.649 1 0.81223 0.91479 0 58476000 30164000 28312000 28887 69 10943 11243 45148;45149;45150 45149 QQEVEAITLELEELK 15 1 0 Unmodified _QQEVEAITLELEELK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 890.4775 2 886.469832 1770.92511 64661.17 0.91682 0.00081273 -0.65501 -0.00058065 0.26181 0.00023209 886.469540681826 890.47620318738 132.31 0.65497 132.31 132.04 132.69 0 227 29 12 0 0 0 0.00021934 1 80436 72.265 72.265 1 1.6807 1.3647 0 27379000 11389000 15990000 28888 69 10943 11243 45151 45151 QQEVEAITLELEELK 15 1 0 Unmodified _QQEVEAITLELEELK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 890.478 2 886.469832 1770.92511 64823.36 0.76779 0.00068062 -0.028389 -2.5166E-05 0.7394 0.00065546 886.470117865355 890.476916636246 132.09 0.63545 132.09 131.82 132.46 0 194 27 11 0 0 0 0.0015121 1 79329 62.088 62.088 1 1.6758 1.3995 0 42961000 19057000 23905000 28889 69 10943 11243 45152 45152 QQEVEAITLELEELKR 16 1 1 Unmodified _QQEVEAITLELEELKR_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.6841 3 643.34935 1927.02622 75232.06 0.95281 0.00061299 -0.15502 -9.973E-05 0.79779 0.00051326 643.349264395022 649.356658113446 119.24 0.50256 119.24 118.93 119.44 7.6294E-06 124 21 9 0 0 0 0.000527 1 70466 42.338 42.338 1 1.9637 1.7339 0 41305000 15538000 25768000 28890 69 10944 11244 45153 45153 QQEVEAITLELEELKR 16 1 1 Unmodified _QQEVEAITLELEELKR_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.8798 3 643.34935 1927.02622 75201.08 0.83706 0.00053852 0.14744 9.4854E-05 0.98449 0.00063337 643.349555928025 649.356933645095 118.92 0.46896 118.92 118.73 119.2 0 125 18 10 0 0 0 0.019435 1 69337 28.032 25.346 1 1.8718 1.5896 0 24540000 7610200 16930000 28891 69 10944 11244 45154 45154 QQGHFNSMVALAYSPDGQYIVTGGDDGK 28 1 0 Unmodified _QQGHFNSMVALAYSPDGQYIVTGGDDGK_ 0 0 0 Q15269;A0A0B4J2E5;Q59FM2 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 988.4649 3 985.790772 2954.35049 59067.69 0.61444 0.00060571 0.063084 6.2187E-05 0.67752 0.00066789 986.460904448314 988.460885630451 114.28 0.55654 114.28 113.96 114.51 7.6294E-06 76 23 7 0 0 0 0.0031577 2 66737 23.467 22.189 1 0.96635 0.76648 0 4476200 2148100 2328100 28892 1756 10945 11245 45155;45156 45155 QQGHFNSMVALAYSPDGQYIVTGGDDGK 28 1 0 Unmodified _QQGHFNSMVALAYSPDGQYIVTGGDDGK_ 0 0 0 Q15269;A0A0B4J2E5;Q59FM2 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 988.7956 3 985.790772 2954.35049 NaN NaN NaN -0.38829 -0.00038277 NaN NaN NaN NaN 114.14 0.32274 114.14 113.98 114.3 0 0 0 0 0.00098319 1 65676 34.885 32.236 1 NaN NaN 0 3208000 0 3208000 28893 1756 10945 11245 45157 45157 QQGLASYDYVR 11 0 1 Unmodified _QQGLASYDYVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3248 2 650.320034 1298.62551 NaN NaN NaN -0.68343 -0.00044445 NaN NaN NaN NaN 58.86 0.36782 58.86 58.712 59.079 -3.8147E-06 0 0 0 0.0019873 1 33430 78.939 67.17 1 NaN NaN 0 18581000 0 18581000 28894 1754 10946 11246 45158 45158 QQGLASYDYVR 11 0 1 Unmodified _QQGLASYDYVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.3204 2 650.320034 1298.62551 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.909 1 58.909 58.409 59.409 0 0 0 0 0.021612 1 33474 52.79 39.978 1 28895 1754 10946 11246 45159 45159 QQGLASYDYVR 11 0 1 Unmodified _QQGLASYDYVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.3225 2 650.320034 1298.62551 75857.27 0.78403 0.00050987 -0.057059 -3.7107E-05 0.72697 0.00047277 650.32043366438 655.323821593735 57.738 0.39357 57.738 57.564 57.957 0 98 30 5 0 0 0 5.5799E-08 2 33424 116.52 103.56 1 1.4826 1.6237 0 32122000 13418000 18704000 28896 1754 10946 11246 45160;45161 45160 QQGLASYDYVR 11 0 1 Unmodified _QQGLASYDYVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.3228 2 650.320034 1298.62551 75119.13 0.64146 0.00041715 -0.16779 -0.00010912 0.47367 0.00030804 650.320372057985 655.323566658989 68.656 0.3783 68.656 68.481 68.86 0 129 28 7 0 0 0 0.0019892 1 35865 63.283 50.707 1 2.2075 1.8989 0 7625800 2372900 5252800 28897 1754 10946 11246 45162 45162 QQGLASYDYVR 11 0 1 Unmodified _QQGLASYDYVR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.3238 2 650.320034 1298.62551 NaN NaN NaN -0.40936 -0.00026622 NaN NaN NaN NaN 69.216 0.47773 69.216 69.028 69.506 0 0 0 0 0.0029048 1 35428 70.1 60.147 1 NaN NaN 0 4145300 0 4145300 28898 1754 10946 11246 45163 45163 QQGVLALRPYLQK 13 1 1 Unmodified _QQGVLALRPYLQK_ 0 0 1 A8K492;P56192;B4E0E9;A0A024RBA2;H0YHV5 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.3074 3 505.299825 1512.87765 85222.52 0.23628 0.00011939 0.19505 9.856E-05 0.43133 0.00021795 505.634330229558 511.30759206533 88.509 0.59006 88.509 88.313 88.903 0 108 35 6 0 0 0 0.062652 1 48003 20.381 15.58 1 1.5207 1.3034 0 1605900 634730 971210 28899 732 10947 11247 45164 45164 QQHLAFR 7 0 1 Unmodified _QQHLAFR_ 0 0 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 300.4996 3 300.499721 898.477334 110917.5 0.11179 3.3592E-05 0.1417 4.2582E-05 0.25349 7.6174E-05 300.499576209955 303.835708404697 23.999 0.25538 23.999 23.849 24.104 0 41 12 4 0 0 0 0.037339 2 9777 33.358 8.2701 1 1.0233 1.056 0 6207200 3732300 2474800 28900 1776 10948 11248 45165;45166 45166 QQHLAFR 7 0 1 Unmodified _QQHLAFR_ 0 0 0 Q2NL82;I3L1Q5 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 300.4995 3 300.499721 898.477334 109886.3 0.086854 2.61E-05 -0.23191 -6.9689E-05 -0.14506 -4.359E-05 300.499620412682 303.835627618545 23.369 0.22101 23.369 23.268 23.489 0 36 10 4 0 0 0 0.029587 1 9277 38.818 9.4803 1 0.81278 0.81104 0 8978500 4719800 4258700 28901 1776 10948 11248 45167 45167 QQIESYPTDSILEDQSDQR 19 0 1 Unmodified _QQIESYPTDSILEDQSDQR_ 0 0 0 Q9H836;G5E975;Q12824;B5MCL5 Q9H836 Q9H836 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1131.5232 2 1126.5193 2251.02405 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.075 1 82.075 81.575 82.575 0 0 0 0 0.015131 1 48984 42.789 35.244 1 28902 1276 10949 11249 45168 45168 QQIESYPTDSILEDQSDQR 19 0 1 Unmodified _QQIESYPTDSILEDQSDQR_ 0 0 0 Q9H836;G5E975;Q12824;B5MCL5 Q9H836 Q9H836 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1127.0201 2 1126.5193 2251.02405 NaN NaN NaN -0.74242 -0.00083635 NaN NaN NaN NaN 81.276 0.32665 81.276 81.122 81.449 0 0 0 0 0.0030143 1 49582 60.161 54.882 1 NaN NaN 0 4043600 4043600 0 28903 1276 10949 11249 45169 45169 QQIQSIQQSIER 12 0 1 Unmodified _QQIQSIQQSIER_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.3892 2 729.388979 1456.76341 71493.71 0.62732 0.00045756 0.46866 0.00034183 1.096 0.0007994 729.389159826215 734.393469362213 55.249 0.70375 55.249 54.959 55.662 0 354 65 8 0 0 0 1.4895E-13 2 30961 136.96 136.96 1 0.67542 0.76156 0 99094000 61208000 37886000 28904 812 10950 11250 45170;45171 45171 QQIQSIQQSIER 12 0 1 Unmodified _QQIQSIQQSIER_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.3896 2 729.388979 1456.76341 70894.48 0.77978 0.00056877 0.2545 0.00018563 1.0343 0.0007544 729.389125913898 734.393287321198 54.466 0.52046 54.466 54.139 54.659 0 263 43 8 0 0 0 1.0078E-12 2 30997 131.28 131.28 1 0.67432 0.77333 0 179340000 111850000 67486000 28905 812 10950 11250 45172;45173 45173 QQIQSIQQSIER 12 0 1 Unmodified _QQIQSIQQSIER_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.3896 2 729.388979 1456.76341 71172.73 0.64876 0.0004732 -0.24184 -0.00017639 0.40693 0.00029681 729.388818915476 734.392944896963 64.837 0.93189 64.837 64.571 65.503 0 393 69 11 0 0 0 0.00019881 2 33342 78.513 78.513 1 0.84868 0.73468 0 136990000 73424000 63562000 28906 812 10950 11250 45174;45175 45175 QQIQSIQQSIER 12 0 1 Unmodified _QQIQSIQQSIER_ 0 0 0 Q6FHM6;B1AHD1;P55769 Q6FHM6 Q6FHM6 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.3895 2 729.388979 1456.76341 71271.48 0.44261 0.00032283 -0.023169 -1.6899E-05 0.41944 0.00030593 729.388973260913 734.393120668337 65.371 1.0769 65.371 65.121 66.198 0 428 80 10 0 0 0 1.2512E-06 2 32930 112.13 112.13 1 0.82433 0.71962 0 106400000 56856000 49546000 28907 812 10950 11250 45176;45177 45177 QQLEAVNEAIK 11 1 0 Unmodified _QQLEAVNEAIK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.8442 2 621.838059 1241.66157 76241.29 0.6885 0.00042814 -0.23011 -0.00014309 0.45839 0.00028504 621.837886201975 625.844985983084 53.348 0.99945 53.348 52.67 53.669 0 273 58 8 0 0 0 0.0078138 2 29629 51.927 40.775 1 0.81592 0.91821 0 119180000 70428000 48753000 28908 69 10951 11251 45178;45179 45178 QQLEAVNEAIK 11 1 0 Unmodified _QQLEAVNEAIK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.8381 2 621.838059 1241.66157 75942.98 0.49865 0.00031008 -0.065263 -4.0583E-05 0.43339 0.0002695 621.838072045544 625.845066283785 51.993 1.1306 51.993 51.353 52.484 0 319 57 8 0 0 0 0.0005685 2 29465 74.162 61.143 1 0.85073 0.95089 0 99610000 56888000 42721000 28909 69 10951 11251 45180;45181 45181 QQLEAVNEAIK 11 1 0 Unmodified _QQLEAVNEAIK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.8452 2 621.838059 1241.66157 76402.53 0.47353 0.00029446 0.068145 4.2375E-05 0.54167 0.00033683 621.838056928363 625.845119472922 61.694 1.4165 61.694 61.161 62.577 3.8147E-06 640 115 8 0 0 0 0.0033898 3 31857 59.908 48.418 1 1.7747 1.432 0 22548000 7572700 14975000 28910 69 10951 11251 45182;45183;45184 45184 QQLEAVNEAIK 11 1 0 Unmodified _QQLEAVNEAIK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.8448 2 621.838059 1241.66157 75990.43 0.3488 0.0002169 0.084059 5.2271E-05 0.43286 0.00026917 621.838110187708 625.845141459032 62.328 1.1015 62.328 61.789 62.891 3.8147E-06 546 78 9 0 0 0 0.0019892 1 31509 63.283 52.132 1 1.7496 1.4184 0 24438000 8436400 16001000 28911 69 10951 11251 45185 45185 QQLLTLR 7 0 1 Unmodified _QQLLTLR_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.2721 2 436.271627 870.528701 90734.81 -0.090874 -3.9646E-05 0.13909 6.0681E-05 0.048217 2.1036E-05 436.271498090138 441.275722811411 62.003 0.42594 62.003 61.769 62.195 0 133 34 6 0 0 0 0.010985 1 35567 109.63 65.815 1 1.5468 1.5865 0 36116000 14126000 21990000 28912 1763 10952 11252 45186 45186 QQLLTLR 7 0 1 Unmodified _QQLLTLR_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.2712 2 436.271627 870.528701 92842.59 -0.17395 -7.5891E-05 0.36969 0.00016128 0.19573 8.5394E-05 436.271491824771 441.27577659855 60.626 0.42956 60.626 60.409 60.838 0 89 31 6 0 0 0 0.011486 2 35503 108.24 47.45 1 1.4736 1.6104 0 36741000 15153000 21587000 28913 1763 10952 11252 45187;45188 45188 QQLPEQPFEK 10 1 0 Unmodified _QQLPEQPFEK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.3267 2 622.319502 1242.62445 76556.22 0.67521 0.0004202 0.16352 0.00010176 0.83874 0.00052196 622.319345506486 626.326886546474 54.242 0.55862 54.242 53.956 54.515 0 213 44 7 0 0 0 0.00038137 1 30332 88.136 66.673 1 1.0781 1.2104 0 67795000 35594000 32201000 28914 1570 10953 11253 45189 45189 QQLPEQPFEK 10 1 0 Unmodified _QQLPEQPFEK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.3284 2 622.319502 1242.62445 76793.01 0.043879 2.7306E-05 0.53325 0.00033185 0.57713 0.00035916 622.319579631789 626.32687860188 53.133 0.7121 53.133 52.825 53.537 3.8147E-06 280 64 6 0 0 0 0.0040033 1 30273 62.104 34.362 1 1.0314 1.1352 0 42774000 17479000 25295000 28915 1570 10953 11253 45190 45190 QQLPEQPFEK 10 1 0 Unmodified _QQLPEQPFEK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.3195 2 622.319502 1242.62445 76358.48 0.33546 0.00020876 0.25251 0.00015714 0.58796 0.0003659 622.319377516487 626.326564453218 63.005 0.75977 63.005 62.577 63.337 0 304 66 6 0 0 0 0.042929 1 32254 47.96 33.841 1 1.1191 0.87708 0 16684000 7187400 9496900 28916 1570 10953 11253 45191 45191 QQLPEQPFEK 10 1 0 Unmodified _QQLPEQPFEK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.3267 2 622.319502 1242.62445 76564.33 0.29481 0.00018347 0.16924 0.00010532 0.46406 0.00028879 622.319294978554 626.326578384983 63.541 0.8317 63.541 63.156 63.988 -3.8147E-06 366 75 7 0 0 0 0.048819 1 31818 36.381 26.15 1 1.1465 0.92088 0 15258000 6694600 8563400 28917 1570 10953 11253 45192 45192 QQLSAEELDAQLDAYNAR 18 0 1 Unmodified _QQLSAEELDAQLDAYNAR_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1023.4956 2 1017.98998 2033.96541 NaN NaN NaN -0.74075 -0.00075407 NaN NaN NaN NaN 94.65 0.30095 94.65 94.458 94.759 0 0 0 0 5.9745E-10 2 57416 91.62 69.146 1 NaN NaN 0 8741000 0 8741000 28918 1229 10954 11254 45193;45194 45194 QQLSAEELDAQLDAYNAR 18 0 1 Unmodified _QQLSAEELDAQLDAYNAR_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1022.9927 2 1017.98998 2033.96541 NaN NaN NaN -0.25015 -0.00025465 NaN NaN NaN NaN 93.961 0.36945 93.961 93.803 94.172 0 0 0 0 6.8663E-06 1 58248 71.241 62.728 1 NaN NaN 0 5666700 0 5666700 28919 1229 10954 11254 45195 45195 QQLSAEELDAQLDAYNAR 18 0 1 Unmodified _QQLSAEELDAQLDAYNAR_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1017.9911 2 1017.98998 2033.96541 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.124 1 94.124 93.624 94.624 0 0 0 0 7.0451E-05 1 58479 68.809 56.249 1 28920 1229 10954 11254 45196 45196 QQLSAEELDAQLDAYNAR 18 0 1 Unmodified _QQLSAEELDAQLDAYNAR_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1022.9957 2 1017.98998 2033.96541 59528.29 0.4867 0.00049545 -0.14855 -0.00015122 0.33815 0.00034423 1017.99014961916 1022.99430310917 108.33 0.6405 108.33 107.96 108.6 0 219 32 11 0 0 0 1.2929E-05 2 62078 77.776 77.776 1 0.48833 0.41772 0 39544000 27054000 12491000 28921 1229 10954 11254 45197;45198 45198 QQLSAEELDAQLDAYNAR 18 0 1 Unmodified _QQLSAEELDAQLDAYNAR_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1023.4889 2 1017.98998 2033.96541 59556.27 0.31449 0.00032015 -0.30127 -0.00030669 0.013221 1.3459E-05 1018.49130577305 1022.99401059853 108.35 0.61862 108.35 108.06 108.68 0 195 30 9 0 0 0 1.2929E-05 2 61212 77.776 75.282 1 0.47153 0.4113 0 37988000 26054000 11934000 28922 1229 10954 11254 45199;45200 45200 QQNELAELHANLAR 14 0 1 Unmodified _QQNELAELHANLAR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.6152 3 536.281382 1605.82232 84001.02 0.68291 0.00036623 -0.19476 -0.00010445 0.48814 0.00026178 536.615689824437 539.617922955991 63.469 0.45401 63.469 63.21 63.664 0 95 37 5 0 0 0 0.004039 1 37274 35.891 29.162 1 0.77754 0.77329 0 8313900 3941700 4372300 28923 186;1747 10955 11255 45201 45201 QQNELAELHANLAR 14 0 1 Unmodified _QQNELAELHANLAR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.2813 3 536.281382 1605.82232 82656.21 0.58692 0.00031475 -0.068563 -3.6769E-05 0.51835 0.00027798 536.281247550265 539.617494381701 75.118 0.57253 75.118 74.776 75.348 0 228 41 8 0 0 0 0.0056295 3 39981 34.432 34.432 1 1.4049 1.2085 0 6935500 2919900 4015600 28924 186;1747 10955 11255 45202;45203;45204 45203 QQNELAELHANLAR 14 0 1 Unmodified _QQNELAELHANLAR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.6178 3 536.281382 1605.82232 NaN NaN NaN 0.26491 0.00014206 NaN NaN NaN NaN 75.34 0.56767 75.34 75.016 75.584 0 0 0 0 0.0042484 1 39227 49.298 43.583 1 NaN NaN 0 3555300 0 3555300 28925 186;1747 10955 11255 45205 45205 QQNQELQEQLR 11 0 1 Unmodified _QQNQELQEQLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.8631 2 707.357679 1412.7008 NaN NaN NaN -0.94512 -0.00066854 NaN NaN NaN NaN 35.398 0.26831 35.398 35.304 35.572 0 0 0 0 0.0088996 1 17799 60.518 42.207 1 NaN NaN 0 4525400 0 4525400 28926 186;1747 10956 11256 45206 45206 QQNQELQEQLR 11 0 1 Unmodified _QQNQELQEQLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3593 2 707.357679 1412.7008 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.413 1 35.413 34.913 35.913 3.8147E-06 0 0 0 2.116E-06 1 17805 101.46 78.389 1 28927 186;1747 10956 11256 45207 45207 QQNQELQEQLR 11 0 1 Unmodified _QQNQELQEQLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.3572 2 707.357679 1412.7008 75805.77 0.92321 0.00065304 0.00075221 5.3208E-07 0.92396 0.00065357 707.357644210342 712.361665288223 34.45 0.32137 34.45 34.323 34.645 0 70 25 4 0 0 0 1.8459E-05 2 17449 105.52 105.52 1 1.2122 1.2197 0 10913000 4993700 5919500 28928 186;1747 10956 11256 45208;45209 45208 QQNQELQEQLR 11 0 1 Unmodified _QQNQELQEQLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.3585 2 707.357679 1412.7008 72113.73 0.53033 0.00037513 0.24001 0.00016977 0.77033 0.0005449 707.35831101313 712.361884623977 40.793 0.50469 40.793 40.534 41.039 0 244 43 8 0 0 0 0.00039937 2 18793 81.525 81.525 1 1.6084 1.3552 0 9731900 3999000 5733000 28929 186;1747 10956 11256 45210;45211 45211 QQNQELQEQLR 11 0 1 Unmodified _QQNQELQEQLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.3617 2 707.357679 1412.7008 72395.77 0.3192 0.00022579 0.3673 0.00025981 0.6865 0.0004856 707.358644668087 712.361869730902 40.996 0.43323 40.996 40.732 41.165 0 183 34 8 0 0 0 0.0011838 2 18364 81.338 81.338 1 1.5959 1.2903 0 10654000 4141300 6512600 28930 186;1747 10956 11256 45212;45213 45212 QQPGIELPETELSLR 15 0 1 Unmodified _QQPGIELPETELSLR_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 860.4616 2 855.457059 1708.89956 NaN NaN NaN -0.72774 -0.00062255 NaN NaN NaN NaN 107.28 0.23565 107.28 107.15 107.39 7.6294E-06 0 0 0 0.017821 1 66811 44.188 23.348 1 NaN NaN 0 2968600 0 2968600 28931 1275 10957 11257 45214 45214 QQPGIELPETELSLR 15 0 1 Unmodified _QQPGIELPETELSLR_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.4631 2 855.457059 1708.89956 66695.55 0.77864 0.00066609 0.57627 0.00049297 1.3549 0.0011591 855.457095367351 860.461826414461 118.68 0.36115 118.68 118.49 118.86 -7.6294E-06 112 18 8 0 0 0 0.00029768 2 70068 60.49 60.49 1 0.72002 0.5971 0 11075000 6042500 5032800 28932 1275 10957 11257 45215;45216 45215 QQPGIELPETELSLR 15 0 1 Unmodified _QQPGIELPETELSLR_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 855.96 2 855.457059 1708.89956 66366.29 0.78101 0.00066812 0.40065 0.00034274 1.1817 0.0010109 855.457088165474 860.462122334089 118.47 0.41502 118.47 118.25 118.67 0 112 20 8 0 0 0 0.0017471 1 69070 46.88 46.88 1 0.79594 0.65395 0 13870000 7780800 6089400 28933 1275 10957 11257 45217 45217 QQPPLAQPSASPYPEAVELQR 21 0 1 Unmodified _QQPPLAQPSASPYPEAVELQR_ 0 0 0 B4DIS6;Q9H6R0;Q05BE5;I3L0M5 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1158.5947 2 1153.59241 2305.17026 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.615 1 90.615 90.115 91.115 0 0 0 0 0.0055265 1 56031 44.457 26.54 1 28934 983 10958 11258 45218 45218 QQQEEEDLNLEDR 13 0 1 Unmodified _QQQEEEDLNLEDR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.3743 2 823.368638 1644.72272 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.264 1 47.264 46.764 47.764 0 0 0 0 0.0011363 1 25610 76.655 53.738 1 28935 1820 10959 11259 45219 45219 QQQEEEDLNLEDR 13 0 1 Unmodified _QQQEEEDLNLEDR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.3735 2 823.368638 1644.72272 NaN NaN NaN -0.51737 -0.00042599 NaN NaN NaN NaN 46.226 0.16184 46.226 46.122 46.284 3.8147E-06 0 0 0 6.5742E-06 1 25481 100.88 91.446 1 NaN NaN 0 2990200 0 2990200 28936 1820 10959 11259 45220 45220 QQQEEEDLNLEDR 13 0 1 Unmodified _QQQEEEDLNLEDR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 828.3734 2 823.368638 1644.72272 68889.07 0.64494 0.00053102 0.22358 0.00018408 0.86851 0.00071511 823.36927675284 828.372594670326 55.638 0.43664 55.638 55.425 55.861 0 85 23 5 0 0 0 0.00078464 1 27312 60.49 54.647 1 1.9648 1.7711 0 2057100 694390 1362700 28937 1820 10959 11259 45221 45221 QQQEEEDLNLEDRGEETVLGGGTR 24 0 2 Unmodified _QQQEEEDLNLEDRGEETVLGGGTR_ 0 0 1 Q5T3I0;A8KAG1 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.7565 3 901.421513 2701.24271 64447.27 0.48449 0.00043673 0.34104 0.00030742 0.82553 0.00074415 901.755832668217 908.428200539619 76.844 0.49673 76.844 76.596 77.093 7.6294E-06 217 43 7 0 0 0 5.5854E-13 3 45256 78.413 72.186 1 1.123 1.2113 0 16168000 7777300 8390900 28938 1820 10960 11260 45222;45223;45224 45224 QQQEEEDLNLEDRGEETVLGGGTR 24 0 2 Unmodified _QQQEEEDLNLEDRGEETVLGGGTR_ 0 0 1 Q5T3I0;A8KAG1 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.4229 3 901.421513 2701.24271 64749.59 0.37971 0.00034227 0.50952 0.00045929 0.88922 0.00080156 901.421736936824 908.094438883067 75.934 0.60352 75.934 75.692 76.296 0 252 55 7 0 0 0 2.9999E-13 4 45710 82.593 82.593 1 1.1195 1.2344 0 21727000 9699900 12027000 28939 1820 10960 11260 45225;45226;45227;45228 45227 QQQEEEDLNLEDRGEETVLGGGTR 24 0 2 Unmodified _QQQEEEDLNLEDRGEETVLGGGTR_ 0 0 1 Q5T3I0;A8KAG1 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.7563 3 901.421513 2701.24271 63207.15 0.59282 0.00053438 -0.031153 -2.8082E-05 0.56167 0.0005063 901.755672145933 908.42793565925 88.369 0.64503 88.369 88.078 88.723 0 312 38 11 0 0 0 2.8918E-12 2 48687 72.033 69.81 1 2.282 1.8858 0 23179000 7327600 15851000 28940 1820 10960 11260 45229;45230 45230 QQQEEEDLNLEDRGEETVLGGGTR 24 0 2 Unmodified _QQQEEEDLNLEDRGEETVLGGGTR_ 0 0 1 Q5T3I0;A8KAG1 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 901.7566 3 901.421513 2701.24271 63609.83 0.19277 0.00017376 0.4365 0.00039347 0.62926 0.00056723 901.756190158757 908.094104981966 88.42 0.61127 88.42 88.137 88.748 0 262 33 11 0 0 0 6.1526E-21 2 47931 107.08 104.89 1 1.992 1.8448 0 21559000 6796500 14763000 28941 1820 10960 11260 45231;45232 45232 QQQEELEAEHGTGDK 15 1 0 Unmodified _QQQEELEAEHGTGDK_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.2816 3 566.9237 1697.74927 NaN NaN NaN 1.8867 0.0010696 NaN NaN NaN NaN 18.009 0.27243 18.009 17.912 18.184 -1.9073E-06 0 0 0 0.053679 1 4811 25.609 19.171 1 NaN NaN 0 1249000 1249000 0 28942 1724 10961 11261 45233 45233 QQQEELEAEHGTGDK 15 1 0 Unmodified _QQQEELEAEHGTGDK_ 0 0 0 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.9239 3 566.9237 1697.74927 79797.83 0.094314 5.3469E-05 0.60567 0.00034337 0.69999 0.00039684 566.923891110353 569.595759703936 19.376 0.18225 19.376 19.261 19.444 -1.9073E-06 28 6 7 0 0 0 0.051415 1 5110 16.173 14.44 1 0.81631 0.69042 0 1184100 700870 483180 28943 1724 10961 11261 45234 45234 QQQEELEAEHGTGDKPAAPR 20 1 1 Unmodified _QQQEELEAEHGTGDKPAAPR_ 0 0 1 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.3608 3 731.017322 2190.03014 72815.4 0.62616 0.00045773 0.84646 0.00061878 1.4726 0.0010765 731.352784842633 737.025337161279 22.199 0.16482 22.199 22.098 22.263 0 21 8 5 0 0 0 3.1223E-06 1 8353 52.784 49.447 1 0.68899 0.78226 0 4936400 2662200 2274200 28944 1724 10962 11262 45235 45235 QQQEELEAEHGTGDKPAAPR 20 1 1 Unmodified _QQQEELEAEHGTGDKPAAPR_ 0 0 1 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.2512 4 548.514811 2190.03014 83723.33 0.56664 0.00031081 0.12234 6.7108E-05 0.68898 0.00037792 548.514584825678 553.020746913663 22.198 0.20002 22.198 22.098 22.298 -1.9073E-06 46 10 7 0 0 0 0.051677 1 8307 8.7589 6.5354 1 1.1906 1.3485 0 5599700 2868200 2731500 28945 1724 10962 11262 45236 45236 QQQEELEAEHGTGDKPAAPR 20 1 1 Unmodified _QQQEELEAEHGTGDKPAAPR_ 0 0 1 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.0248 3 731.017322 2190.03014 73993.63 0.51157 0.00037396 0.25376 0.00018551 0.76533 0.00055947 731.016479824153 737.359754611356 21.816 0.23534 21.816 21.679 21.915 0 28 11 5 0 0 0 8.5779E-08 1 7904 85.808 80.098 1 1.4417 1.597 0 8407600 3417500 4990100 28946 1724 10962 11262 45237 45237 QQQEELEAEHGTGDKPAAPR 20 1 1 Unmodified _QQQEELEAEHGTGDKPAAPR_ 0 0 1 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.0205 4 548.514811 2190.03014 82720.41 0.33346 0.00018291 -0.088816 -4.8717E-05 0.24464 0.00013419 548.765383516551 553.270846064318 21.826 0.26979 21.826 21.727 21.996 0 42 11 6 0 0 0 0.037525 1 7925 12.663 12.663 1 0.96956 1.0738 0 8236200 4877500 3358600 28947 1724 10962 11262 45238 45238 QQQEELEAEHGTGDKPAAPR 20 1 1 Unmodified _QQQEELEAEHGTGDKPAAPR_ 0 0 1 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.0258 3 731.017322 2190.03014 71473.41 0.56402 0.00041231 -0.12361 -9.0362E-05 0.44041 0.00032195 731.351519771975 737.024760460797 25.059 0.3884 25.059 24.849 25.237 0 105 19 9 0 0 0 0.020727 1 8970 21.045 21.045 1 1.0204 0.89429 0 2393000 1179700 1213200 28948 1724 10962 11262 45239 45239 QQQEELEAEHGTGDKPAAPR 20 1 1 Unmodified _QQQEELEAEHGTGDKPAAPR_ 0 0 1 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.7651 4 548.514811 2190.03014 81030.2 0.40435 0.00022179 0.29556 0.00016212 0.69991 0.00038391 548.765511067966 553.020468300739 25.034 0.41786 25.034 24.863 25.281 0 110 20 10 0 0 0 0.058284 1 9006 7.6872 7.6872 1 0.82917 0.68594 0 5564400 2827600 2736800 28949 1724 10962 11262 45240 45240 QQQEELEAEHGTGDKPAAPR 20 1 1 Unmodified _QQQEELEAEHGTGDKPAAPR_ 0 0 1 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.0182 3 731.017322 2190.03014 70548 0.65299 0.00047735 -0.28308 -0.00020693 0.36992 0.00027042 731.351686485232 737.024675984287 25.097 0.32986 25.097 24.932 25.262 1.9073E-06 111 18 9 0 0 0 0.017431 1 8533 21.667 21.667 1 1.0531 0.90579 0 2478500 1192400 1286000 28950 1724 10962 11262 45241 45241 QQQEELEAEHGTGDKPAAPR 20 1 1 Unmodified _QQQEELEAEHGTGDKPAAPR_ 0 0 1 Q13895;F8WBL2 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.7659 4 548.514811 2190.03014 79693.2 0.55052 0.00030197 0.023622 1.2957E-05 0.57414 0.00031492 548.51460980653 553.020364865493 25.09 0.36683 25.09 24.914 25.281 0 111 20 8 0 0 0 0.032952 1 8544 14.161 14.161 1 0.93168 0.78582 0 3867300 1902100 1965200 28951 1724 10962 11262 45242 45242 QQQFNVQALVAVGDHASK 18 1 0 Unmodified _QQQFNVQALVAVGDHASK_ 0 0 0 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85;C9JQM9;H7C278 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.0103 3 647.337668 1938.99117 75714.45 0.73419 0.00047527 0.29639 0.00019187 1.0306 0.00066714 647.672285201757 650.009497506309 106.05 0.42656 106.05 105.85 106.28 0 87 19 7 0 0 0 0.004056 1 60558 17.577 17.577 1 0.84393 0.66755 0 4157900 2337600 1820200 28952 610 10963 11263 45243 45243 QQQFNVQALVAVGDHASK 18 1 0 Unmodified _QQQFNVQALVAVGDHASK_ 0 0 0 D3DP78;A0A140VJW5;P14868;C9J7S3;C9JLC1;Q53R85;C9JQM9;H7C278 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 650.0114 3 647.337668 1938.99117 76104.13 0.68474 0.00044326 0.092877 6.0123E-05 0.77761 0.00050338 647.672274143341 650.343169629378 105.82 0.42526 105.82 105.62 106.05 7.6294E-06 113 25 7 0 0 0 0.00032923 2 59519 29.092 29.092 1 0.80604 0.6544 0 4433800 2588100 1845700 28953 610 10963 11263 45244;45245 45244 QQQLLNEENLR 11 0 1 Unmodified _QQQLLNEENLR_ 0 0 0 Q9NVI7;H0Y2W2;Q96T67;Q5T9A4 Q9NVI7 Q9NVI7 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.8671 2 692.862597 1383.71064 NaN NaN NaN 0.59925 0.0004152 NaN NaN NaN NaN 56.428 0.30322 56.428 56.307 56.611 3.8147E-06 0 0 0 0.0026738 1 31801 72.325 51.996 1 NaN NaN 0 5014500 0 5014500 28954 2074 10964 11264 45246 45246 QQQVDIPLR 9 0 1 Unmodified _QQQVDIPLR_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.8135 2 548.809105 1095.60366 NaN NaN NaN -0.32019 -0.00017572 NaN NaN NaN NaN 62.32 0.46796 62.32 61.969 62.437 0 0 0 0 0.019539 1 35729 59.245 40.463 1 NaN NaN 0 5711500 0 5711500 28955 2087 10965 11265 45247 45247 QQQVDIPLR 9 0 1 Unmodified _QQQVDIPLR_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.8149 2 548.809105 1095.60366 NaN NaN NaN -0.56741 -0.0003114 NaN NaN NaN NaN 60.904 0.46169 60.904 60.688 61.149 0 0 0 0 0.024277 1 35652 55.531 37.495 1 NaN NaN 0 8553500 0 8553500 28956 2087 10965 11265 45248 45248 QQQVLPLDPAEPEIR 15 0 1 Unmodified _QQQVLPLDPAEPEIR_ 0 0 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 872.4716 2 866.965051 1731.91555 65752.96 0.70094 0.00060769 0.25771 0.00022343 0.95865 0.00083112 866.965605719849 871.969568049253 111.25 0.44321 111.25 111.01 111.45 -7.6294E-06 65 18 6 0 0 0 0.00049803 1 64406 56.205 56.205 1 1.6218 1.3555 0 3470300 1482700 1987600 28957 1879 10966 11266 45249 45249 QQSIAGSADSKPIDVSR 17 1 1 Unmodified _QQSIAGSADSKPIDVSR_ 0 0 1 Q12904 Q12904 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.9792 3 586.970873 1757.89079 76204.18 0.5262 0.00030886 -0.55044 -0.00032309 -0.024245 -1.4231E-05 587.305137725361 592.978394468944 43.968 0.32231 43.968 43.826 44.148 0 84 21 5 0 0 0 0.0045357 2 20282 31.115 26.872 1 1.0891 0.94045 0 2126900 981220 1145700 28958 1702 10967 11267 45250;45251 45250 QQSVAHQQSGSELALR 16 0 1 Unmodified _QQSVAHQQSGSELALR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.9466 2 869.945181 1737.87581 71780.49 0.48805 0.00042457 -0.40627 -0.00035343 0.08178 7.1144E-05 869.944726816823 874.948888187625 31.259 0.26661 31.259 31.1 31.366 0 44 23 4 0 0 0 0.00022597 1 15471 58.674 46.808 1 0.86024 0.86718 0 10551000 5682700 4868100 28959 1421 10968 11268 45252 45252 QQSVAHQQSGSELALR 16 0 1 Unmodified _QQSVAHQQSGSELALR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.9449 2 869.945181 1737.87581 65935.92 0.32041 0.00027874 0.021799 1.8964E-05 0.3422 0.0002977 869.945100907209 874.949456448606 36.997 0.3589 36.997 36.825 37.184 0 142 30 6 0 0 0 0.021515 1 16637 27.967 24.645 1 1.1233 0.9406 0 3967000 1785400 2181600 28960 1421 10968 11268 45253 45253 QQSVAHQQSGSELALR 16 0 1 Unmodified _QQSVAHQQSGSELALR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.2991 3 580.299213 1737.87581 NaN NaN NaN -1.6689 -0.00096846 NaN NaN NaN NaN 37.034 1.0805 37.034 36.697 37.777 0 0 0 0 0.0054124 1 16687 41.86 34.802 1 NaN NaN 0 11627000 11627000 0 28961 1421 10968 11268 45254 45254 QQVPSGESAILDR 13 0 1 Unmodified _QQVPSGESAILDR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8643 2 700.36243 1398.71031 69972.91 0.69063 0.00048369 0.26822 0.00018785 0.95885 0.00067154 700.362626967375 705.36702033597 58.035 0.78613 58.035 57.718 58.504 0 381 63 10 0 0 0 0.00011686 3 32748 76.143 65.911 1 0.63252 0.73119 0 161470000 98504000 62961000 28962 139 10969 11269 45255;45256;45257 45256 QQVPSGESAILDR 13 0 1 Unmodified _QQVPSGESAILDR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.3664 2 700.36243 1398.71031 71666.57 0.70157 0.00049135 0.10377 7.2677E-05 0.80534 0.00056403 700.36256027457 705.366760697884 57.015 0.57593 57.015 56.763 57.339 0 311 42 11 0 0 0 0.00015089 3 32805 84.658 77.278 1 0.68869 0.79129 0 195810000 118480000 77331000 28963 139 10969 11269 45258;45259;45260 45259 QQVPSGESAILDR 13 0 1 Unmodified _QQVPSGESAILDR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.3676 2 700.36243 1398.71031 71744.2 0.44623 0.00031252 0.18282 0.00012804 0.62904 0.00044056 700.362622404083 705.366749970944 68.325 1.1273 68.325 67.82 68.947 0 391 79 10 0 0 0 0.0039561 2 34735 48.998 48.998 1 1.0621 0.92684 0 65260000 31420000 33839000 28964 139 10969 11269 45261;45262 45262 QQVQVVGLQEHLVNSADDVIK 21 1 0 Unmodified _QQVQVVGLQEHLVNSADDVIK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.4202 3 773.748284 2318.22302 69177.31 1.0332 0.00079943 -0.25711 -0.00019894 0.77609 0.0006005 774.082428393082 776.753803535471 112.18 0.38124 112.18 111.97 112.35 0 163 22 10 0 0 0 5.55E-06 2 65056 47.603 47.603 1 1.2086 0.95248 0 17645000 7871600 9773600 28965 626 10970 11270 45263;45264 45263 QQVQVVGLQEHLVNSADDVIK 21 1 0 Unmodified _QQVQVVGLQEHLVNSADDVIK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;B7Z7M6;Q8N5N1 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 774.0828 3 773.748284 2318.22302 69831.34 0.77485 0.00059954 -0.10316 -7.9816E-05 0.67169 0.00051972 774.082387107667 776.753967148804 111.98 0.41808 111.98 111.78 112.2 0 135 21 10 0 0 0 0.058211 1 64081 9.0399 9.0399 1 1.4096 1.1319 0 14718000 6337100 8380400 28966 626 10970 11270 45265 45265 QQVQVVGLQER 11 0 1 Unmodified _QQVQVVGLQER_ 0 0 0 B0AZS5;O00139;B4DM85;H0Y8H2 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3574 2 642.356951 1282.69935 77535.52 0.7717 0.0004957 0.052479 3.371E-05 0.82418 0.00052941 642.356959160591 647.361417544058 52.311 0.52887 52.311 52.082 52.611 0 121 39 4 0 0 0 0.00090132 1 29736 71.614 41.044 1 0.66139 0.66117 0 11478000 6712000 4766100 28967 804 10971 11271 45266 45266 QRPASLVVADFGCGDCR 17 0 2 Unmodified _QRPASLVVADFGCGDCR_ 0 0 1 O43159 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.9677 3 636.63321 1906.8778 76447.05 0.49421 0.00031463 0.25866 0.00016467 0.75288 0.00047931 636.96783112958 643.305624170963 82.492 0.59079 82.492 82.229 82.82 0 119 36 5 0 0 0 0.0046275 1 44904 31.753 31.753 1 0.76326 0.69451 0 2520600 1394600 1126000 28968 1380 10972 11272 45267 45267 QRPASLVVADFGCGDCR 17 0 2 Unmodified _QRPASLVVADFGCGDCR_ 0 0 1 O43159 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.9689 3 636.63321 1906.8778 NaN NaN NaN 0.034801 2.2155E-05 NaN NaN NaN NaN 82.589 0.48824 82.589 82.34 82.828 0 0 0 0 0.052708 1 44077 19.791 19.131 1 NaN NaN 0 1066200 1066200 0 28969 1380 10972 11272 45268 45268 QRSLQSLEASLHAMESTRESLK 22 1 2 Unmodified _QRSLQSLEASLHAMESTRESLK_ 0 0 2 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.8855 6 417.719007 2500.27038 NaN NaN NaN -1.4436 -0.000603 NaN NaN NaN NaN 19.948 0.31238 19.948 19.76 20.073 -1.9073E-06 0 0 0 0.040453 1 6279 13.731 5.4429 1 NaN NaN 0 8866100 8866100 0 28970 803 10973 11273 45269 45269 QRVELQQEVEK 11 1 1 Unmodified _QRVELQQEVEK_ 0 0 1 A0A024R804;A8WFP5;O60675 A0A024R804 A0A024R804 MAFK Transcription factor MafK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3745 2 693.372798 1384.73104 71354.32 0.79849 0.00055365 0.50144 0.00034768 1.2999 0.00090134 693.373448477812 702.384262654036 28.258 0.21222 28.258 28.132 28.344 0 60 14 7 0 0 0 9.7698E-05 1 13264 101.39 54.207 1 1.9778 2.1771 0 17893000 5437000 12456000 28971 239 10974 11274 45270 45270 QRVELQQEVEK 11 1 1 Unmodified _QRVELQQEVEK_ 0 0 1 A0A024R804;A8WFP5;O60675 A0A024R804 A0A024R804 MAFK Transcription factor MafK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.3728 2 693.372798 1384.73104 71923.4 0.38408 0.00026631 0.45592 0.00031612 0.84 0.00058243 693.372917969618 702.38485474754 27.388 0.18252 27.388 27.3 27.483 1.9073E-06 39 8 6 0 0 0 1.1723E-09 1 12695 137.89 81.166 1 1.4406 1.6687 0 34303000 14690000 19614000 28972 239 10974 11274 45271 45271 QRWENIATILEAK 13 1 1 Unmodified _QRWENIATILEAK_ 0 0 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.6306 3 524.622857 1570.84674 85186.7 0.56131 0.00029448 -0.0287 -1.5057E-05 0.53261 0.00027942 524.622820232371 530.630315011549 110.25 0.35215 110.25 110.07 110.42 0 73 18 6 0 0 0 0.036117 1 62772 23.956 23.956 1 1.5996 1.382 0 2170600 862210 1308400 28973 1803 10975 11275 45272 45272 QRYEILTPNSIPK 13 1 1 Unmodified _QRYEILTPNSIPK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.2924 3 520.291107 1557.85149 88142.98 0.20148 0.00010483 0.30249 0.00015738 0.50397 0.00026221 520.29176543625 526.298829397156 83.384 0.38797 83.384 83.16 83.548 0 59 23 4 0 0 0 0.047115 1 45485 17.506 17.506 1 3.5753 2.9291 0 4706500 870490 3836000 28974 81 10976 11276 45273 45273 QRYEILTPNSIPK 13 1 1 Unmodified _QRYEILTPNSIPK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 526.2979 3 520.291107 1557.85149 83292.99 0.40793 0.00021224 -0.011047 -5.7475E-06 0.39688 0.00020649 520.625229234755 526.298603815728 83.373 0.41077 83.373 83.127 83.538 0 81 22 6 0 0 0 0.025314 2 44600 21.831 19.532 1 3.4539 2.9079 0 4226300 915560 3310800 28975 81 10976 11276 45274;45275 45274 QSCFIIFEDSSK 12 1 0 Unmodified _QSCFIIFEDSSK_ 0 0 0 Q9Y483;Q96G26;Q7Z534 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.3489 2 730.839942 1459.66533 71364.2 0.77921 0.00056948 0.021216 1.5505E-05 0.80042 0.00058498 730.840025339006 734.847220854514 108.3 0.77242 108.3 107.96 108.73 0 128 39 6 0 0 0 0.017356 1 62076 41.54 40.289 1 2.7126 2.2226 0 2453200 831500 1621700 28976 2143 10977 11277 45276 45276 QSGEAFVELGSEDDVK 16 1 0 Unmodified _QSGEAFVELGSEDDVK_ 0 0 0 A0A024R7T3;P52597;A0A1B0GW42 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.3972 2 855.396864 1708.77917 66778.18 0.70005 0.00059882 -1.0265 -0.00087809 -0.32648 -0.00027927 855.898235429412 859.401686388038 79.172 0.54527 79.172 78.931 79.476 0 228 49 6 0 0 0 0.00013565 5 46837 76.522 67.793 1 1.5181 1.568 0 29093000 11685000 17408000 28977 234 10978 11278 45277;45278;45279;45280;45281 45279 QSGEAFVELGSEDDVK 16 1 0 Unmodified _QSGEAFVELGSEDDVK_ 0 0 0 A0A024R7T3;P52597;A0A1B0GW42 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 859.9061 2 855.396864 1708.77917 NaN NaN NaN -1.379 -0.0011796 NaN NaN NaN NaN 78.151 0.52424 78.151 77.981 78.505 0 0 0 0 1.2198E-08 2 47265 98.368 68.817 1 NaN NaN 0 24927000 0 24927000 28978 234 10978 11278 45282;45283 45282 QSGEAFVELGSEDDVK 16 1 0 Unmodified _QSGEAFVELGSEDDVK_ 0 0 0 A0A024R7T3;P52597;A0A1B0GW42 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 855.3978 2 855.396864 1708.77917 NaN NaN NaN -0.13175 -0.0001127 NaN NaN NaN NaN 78.212 0.49956 78.212 77.981 78.481 0 0 0 0 1.1308E-08 1 47278 98.902 92.798 1 NaN NaN 0 15621000 15621000 0 28979 234 10978 11278 45284 45284 QSGEAFVELGSEDDVK 16 1 0 Unmodified _QSGEAFVELGSEDDVK_ 0 0 0 A0A024R7T3;P52597;A0A1B0GW42 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.9056 2 855.396864 1708.77917 65105.71 0.7879 0.00067396 -0.15751 -0.00013474 0.63038 0.00053923 855.396820383078 859.40359508713 90.789 0.60065 90.789 90.493 91.093 7.6294E-06 211 34 8 0 0 0 0.0030703 2 50228 38.189 38.189 1 1.1309 0.89121 0 10909000 4932500 5976900 28980 234 10978 11278 45285;45286 45285 QSGEAFVELGSEDDVK 16 1 0 Unmodified _QSGEAFVELGSEDDVK_ 0 0 0 A0A024R7T3;P52597;A0A1B0GW42 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 859.9055 2 855.396864 1708.77917 65785.01 0.51005 0.00043629 -0.72139 -0.00061707 -0.21134 -0.00018078 855.396442812199 859.402818858521 90.692 0.53426 90.692 90.484 91.018 0 182 28 8 0 0 0 0.00015109 3 49398 62.732 62.732 1 1.0519 0.86924 0 11680000 5868000 5812100 28981 234 10978 11278 45287;45288;45289 45288 QSGESIDIITR 11 0 1 Unmodified _QSGESIDIITR_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0;F5GZY8;F5GYG8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8252 2 609.819867 1217.62518 78638.72 0.30798 0.00018781 0.64872 0.0003956 0.9567 0.00058342 609.820442477558 614.824502722156 64.496 0.96368 64.496 64.141 65.105 0 334 84 5 0 0 0 0.0030982 2 37320 60.434 40.647 1 0.5837 0.62161 0 43457000 27029000 16428000 28982 1770 10979 11279 45290;45291 45291 QSGESIDIITR 11 0 1 Unmodified _QSGESIDIITR_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0;F5GZY8;F5GYG8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.82 2 609.819867 1217.62518 80093.62 0.48944 0.00029847 0.46865 0.00028579 0.95809 0.00058426 609.820296865118 614.824174209121 63.395 0.87578 63.395 62.975 63.851 0 305 74 5 0 0 0 0.00083921 1 37110 81.865 59.779 1 0.62902 0.68774 0 30484000 19879000 10605000 28983 1770 10979 11279 45292 45292 QSGESIDIITR 11 0 1 Unmodified _QSGESIDIITR_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0;F5GZY8;F5GYG8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.824 2 609.819867 1217.62518 78283.3 0.51675 0.00031512 0.1201 7.324E-05 0.63685 0.00038836 609.819931430048 614.824039972616 74.17 1.1798 74.17 73.725 74.904 0 368 81 7 0 0 0 0.0040722 2 39163 58.676 47.073 1 1.1992 0.98138 0 13346000 6163500 7182200 28984 1770 10979 11279 45293;45294 45294 QSGESIDIITR 11 0 1 Unmodified _QSGESIDIITR_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0;F5GZY8;F5GYG8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.8245 2 609.819867 1217.62518 79263.64 0.38975 0.00023768 0.19971 0.00012179 0.58947 0.00035947 609.820196115582 614.823995846448 74.548 1.1324 74.548 74.144 75.277 0 327 72 7 0 0 0 0.012154 1 38614 48.004 36.156 1 1.1707 0.95207 0 12367000 5049000 7318200 28985 1770 10979 11279 45295 45295 QSILNSLSR 9 0 1 Unmodified _QSILNSLSR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.2924 2 509.288005 1016.56146 NaN NaN NaN -0.65748 -0.00033485 NaN NaN NaN NaN 65.871 0.46181 65.871 65.553 66.015 0 0 0 0 0.00090954 1 37876 89.047 53.603 1 NaN NaN 0 22599000 0 22599000 28986 2023 10980 11280 45296 45296 QSILNSLSR 9 0 1 Unmodified _QSILNSLSR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.2882 2 509.288005 1016.56146 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.697 1 65.697 65.197 66.197 0 0 0 0 1.5204E-08 1 37852 122.13 23.836 1 28987 2023 10980 11280 45297 45297 QSILNSLSR 9 0 1 Unmodified _QSILNSLSR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.2924 2 509.288005 1016.56146 83901.1 0.31263 0.00015922 -0.19633 -9.9987E-05 0.1163 5.923E-05 509.287855144693 514.29203724686 64.581 0.94449 64.581 64.204 65.149 -7.6294E-06 268 82 5 0 0 0 0.00026447 2 37973 104.2 83.998 1 0.88554 1.0142 0 51037000 26804000 24233000 28988 2023 10980 11280 45298;45299 45299 QSILNSLSR 9 0 1 Unmodified _QSILNSLSR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.2924 2 509.288005 1016.56146 84396.46 0.45247 0.00023044 -0.40879 -0.00020819 0.043679 2.2245E-05 509.287912437485 514.291796304993 75.64 0.96371 75.64 75.225 76.189 0 300 67 6 0 0 0 0.014061 1 40127 56.013 39.77 1 1.2672 1.0783 0 35128000 14955000 20173000 28989 2023 10980 11280 45300 45300 QSILNSLSR 9 0 1 Unmodified _QSILNSLSR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.2881 2 509.288005 1016.56146 84463.85 0.25275 0.00012872 -0.050835 -2.589E-05 0.20192 0.00010283 509.288006063174 514.292028358407 75.898 0.92898 75.898 75.542 76.471 0 269 62 6 0 0 0 0.0019674 2 39524 78.516 59.413 1 1.2585 1.0977 0 32388000 13150000 19238000 28990 2023 10980 11280 45301;45302 45302 QSLEASLAETEGR 13 0 1 Unmodified _QSLEASLAETEGR_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.8439 2 695.84407 1389.67359 NaN NaN NaN -0.76613 -0.0005331 NaN NaN NaN NaN 61.717 0.82812 61.717 61.427 62.255 0 0 0 0 5.1633E-38 1 35265 164.04 137.52 1 NaN NaN 0 58497000 58497000 0 + 28991 1161 10981 11281 45303 45303 QSLEASLAETEGR 13 0 1 Unmodified _QSLEASLAETEGR_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.8432 2 695.84407 1389.67359 NaN NaN NaN -0.93496 -0.00065059 NaN NaN NaN NaN 60.732 0.53381 60.732 60.409 60.942 0 0 0 0 1.6322E-48 1 35421 178.53 155.21 1 NaN NaN 0 55837000 55837000 0 + 28992 1161 10981 11281 45304 45304 QSLEASLAETEGR 13 0 1 Unmodified _QSLEASLAETEGR_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 695.8447 2 695.84407 1389.67359 NaN NaN NaN -0.76155 -0.00052992 NaN NaN NaN NaN 72.052 1.5693 72.052 71.332 72.902 0 0 0 0 9.0748E-14 2 37743 119.03 109.6 1 NaN NaN 0 43765000 43765000 0 + 28993 1161 10981 11281 45305;45306 45305 QSLETICLLLAYK 13 1 0 Unmodified _QSLETICLLLAYK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.4328 2 776.426184 1550.83782 69891.81 0.75735 0.00058803 -0.80263 -0.00062319 -0.045284 -3.5159E-05 776.926795132651 780.433078806145 121.57 0.436 121.57 121.36 121.8 0 143 33 6 0 0 0 0.00021073 1 80595 69.979 69.979 1 1.2532 1.2672 0 8819900 4042200 4777700 28994 1632;343;1633 10982 11282 45307 45307 QSLETICLLLAYK 13 1 0 Unmodified _QSLETICLLLAYK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.4342 2 776.426184 1550.83782 67869.91 1.2113 0.00094048 0.009695 7.5274E-06 1.221 0.00094801 776.426047537199 780.433378472895 134.42 0.15378 134.42 134.35 134.5 0 34 6 7 0 0 0 0.00023426 1 82095 68.836 68.836 1 2.4731 1.9214 0 15007000 4047600 10959000 28995 1632;343;1633 10982 11282 45308 45308 QSLETICLLLAYK 13 1 0 Unmodified _QSLETICLLLAYK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.433 2 776.426184 1550.83782 69684.78 0.9571 0.00074311 -0.51089 -0.00039667 0.44621 0.00034645 776.927458313139 780.43308111512 134.32 0.25378 134.32 134.19 134.44 0 46 11 7 0 0 0 0.0022626 1 81090 54.471 48.368 1 2.3408 1.9259 0 10247000 3123900 7123400 28996 1632;343;1633 10982 11282 45309 45309 QSLEYLEQVR 10 0 1 Unmodified _QSLEYLEQVR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8337 2 632.830234 1263.64592 77271.12 0.51876 0.00032828 0.38213 0.00024183 0.90089 0.00057011 632.830622707538 637.834359475353 73.036 0.87972 73.036 72.847 73.726 0 248 79 4 0 0 0 1.1374E-05 1 42817 104.2 27.976 1 1.2918 1.4179 0 53720000 25001000 28719000 28997 1183 10983 11283 45310 45310 QSLEYLEQVR 10 0 1 Unmodified _QSLEYLEQVR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.8348 2 632.830234 1263.64592 78710.3 0.52884 0.00033467 0.52841 0.00033439 1.0572 0.00066906 632.831103824274 637.834201381976 71.945 0.86194 71.945 71.616 72.478 0 278 75 6 0 0 0 3.5724E-08 2 43111 118.71 28.826 1 1.1293 1.242 0 40782000 16819000 23962000 28998 1183 10983 11283 45311;45312 45311 QSLEYLEQVR 10 0 1 Unmodified _QSLEYLEQVR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.8343 2 632.830234 1263.64592 74855.48 0.46308 0.00029305 0.059487 3.7645E-05 0.52257 0.0003307 632.830681391375 637.834112051478 83.984 0.99699 83.984 83.649 84.646 0 328 79 7 0 0 0 9.688E-07 1 45690 112.01 23.741 1 1.9747 1.6664 0 29124000 10682000 18441000 28999 1183 10983 11283 45313 45313 QSLEYLEQVR 10 0 1 Unmodified _QSLEYLEQVR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.8345 2 632.830234 1263.64592 74624.19 0.75929 0.0004805 -0.37956 -0.0002402 0.37973 0.0002403 632.830506893361 637.8338992453 84.164 1.1592 84.164 83.789 84.948 0 307 90 6 0 0 0 0.00076923 1 45006 81.525 14.563 1 1.9088 1.6568 0 24082000 7578500 16503000 29000 1183 10983 11283 45314 45314 QSLGHGQHGSGSGQSPSPSR 20 0 1 Unmodified _QSLGHGQHGSGSGQSPSPSR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.3067 3 649.972047 1946.89431 NaN NaN NaN 1.2893 0.00083802 NaN NaN NaN NaN 14.538 0.19049 14.538 14.46 14.651 0 0 0 0 2.0773E-05 1 2428 50.055 44.274 1 NaN NaN 0 3160500 3160500 0 + 29001 1179 10984 11284 45315 45315 QSLGHGQHGSGSGQSPSPSR 20 0 1 Unmodified _QSLGHGQHGSGSGQSPSPSR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.9721 3 649.972047 1946.89431 NaN NaN NaN -0.042302 -2.7495E-05 NaN NaN NaN NaN 14.889 0.20459 14.889 14.797 15.002 0 0 0 0 0.00045911 1 2463 32.702 28.799 1 NaN NaN 0 2054800 2054800 0 + 29002 1179 10984 11284 45316 45316 QSLGHGQHGSGSGQSPSPSR 20 0 1 Unmodified _QSLGHGQHGSGSGQSPSPSR_ 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.972 3 649.972047 1946.89431 NaN NaN NaN 0.29043 0.00018877 NaN NaN NaN NaN 14.809 0.1368 14.809 14.741 14.878 -9.5367E-07 0 0 0 2.2117E-05 1 2364 43.162 39.614 1 NaN NaN 0 816050 816050 0 + 29003 1179 10984 11284 45317 45317 QSLPPGLAVK 10 1 0 Unmodified _QSLPPGLAVK_ 0 0 0 A0A024R8P8;P63173 A0A024R8P8 A0A024R8P8 RPL38 60S ribosomal protein L38 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.313 2 505.305667 1008.59678 NaN NaN NaN 0.12445 6.2885E-05 NaN NaN NaN NaN 64.191 1.4376 64.191 63.469 64.906 0 0 0 0 0.0067484 1 37115 66.692 39.562 1 NaN NaN 0 16580000 0 16580000 29004 253 10985 11285 45318 45318 QSLPPGLAVK 10 1 0 Unmodified _QSLPPGLAVK_ 0 0 0 A0A024R8P8;P63173 A0A024R8P8 A0A024R8P8 RPL38 60S ribosomal protein L38 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.3135 2 505.305667 1008.59678 85488.23 0.22288 0.00011262 0.073509 3.7144E-05 0.29639 0.00014977 505.305676224595 509.31273163266 62.876 1.5902 62.876 62.132 63.722 0 432 141 5 0 0 0 0.016025 1 37172 48.423 48.423 1 1.0563 1.0669 0 28515000 12887000 15628000 29005 253 10985 11285 45319 45319 QSLPPGLAVK 10 1 0 Unmodified _QSLPPGLAVK_ 0 0 0 A0A024R8P8;P63173 A0A024R8P8 A0A024R8P8 RPL38 60S ribosomal protein L38 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.313 2 505.305667 1008.59678 85403.67 0.4271 0.00021582 -0.051318 -2.5931E-05 0.37578 0.00018988 505.305566633848 509.312661594321 73.639 1.9397 73.639 72.739 74.679 0 531 134 5 0 0 0 0.0055366 3 38800 60.019 52.146 1 1.427 1.136 0 6703200 2800700 3902500 29006 253 10985 11285 45320;45321;45322 45320 QSMWSLLTALSGK 13 1 0 Unmodified _QSMWSLLTALSGK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;H7C415 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.384 2 711.376494 1420.73844 74452.05 0.75757 0.00053892 -1.3228 -0.000941 -0.56521 -0.00040208 711.376234959577 715.884217361974 129.46 0.3351 129.46 129.32 129.65 0 66 18 7 0 0 0 0.0074284 2 86496 45.077 41.06 1 0.50331 0.50989 0 5297500 3606800 1690700 29007 740 10986 11286 45323;45324 45324 QSNASSDVEVEEK 13 1 0 Unmodified _QSNASSDVEVEEK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.3293 2 711.323167 1420.63178 77001.14 0.9619 0.00068422 -1.0473 -0.00074494 -0.085364 -6.0722E-05 711.323065334312 715.328830216734 22.32 0.3366 22.32 22.141 22.478 0 57 20 5 0 0 0 0.00012183 1 8422 77.387 72.481 1 0.61122 0.61832 0 6821900 4060500 2761400 29008 1405 10987 11287 45325 45325 QSPLGFEVHDEITVTR 16 0 1 Unmodified _QSPLGFEVHDEITVTR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.3163 3 609.979369 1826.91628 77732.28 0.73584 0.00044885 0.086524 5.2778E-05 0.82236 0.00050163 609.97920031878 613.315682175534 86.579 0.92975 86.579 86.168 87.098 0 341 67 8 0 0 0 4.748E-05 2 52172 54.103 54.103 1 0.80504 0.90533 0 95350000 50844000 44506000 29009 69 10988 11288 45326;45327 45327 QSPLGFEVHDEITVTR 16 0 1 Unmodified _QSPLGFEVHDEITVTR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.3139 3 609.979369 1826.91628 77434.87 0.5542 0.00033805 0.86515 0.00052772 1.4194 0.00086577 610.313855922662 613.316833021655 85.571 1.0397 85.571 84.933 85.973 0 414 82 9 0 0 0 0.0017271 1 52507 35.872 35.872 1 0.91443 1.0407 0 127110000 64626000 62487000 29010 69 10988 11288 45328 45328 QSPLGFEVHDEITVTR 16 0 1 Unmodified _QSPLGFEVHDEITVTR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.967 2 914.465415 1826.91628 NaN NaN NaN -0.8801 -0.00080482 NaN NaN NaN NaN 85.571 0.18575 85.571 85.435 85.62 0 0 0 0 0.0043467 1 52657 54.524 42.992 1 NaN NaN 0 8891400 8891400 0 29011 69 10988 11288 45329 45329 QSPLGFEVHDEITVTR 16 0 1 Unmodified _QSPLGFEVHDEITVTR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.3162 3 609.979369 1826.91628 76585.66 0.51074 0.00031154 0.28625 0.00017461 0.79699 0.00048615 610.313725072971 613.315553876699 98.85 0.8466 98.85 98.549 99.396 0 311 50 10 0 0 0 4.6816E-05 2 55684 56.817 56.817 1 1.8126 1.5423 0 35077000 13115000 21962000 29012 69 10988 11288 45330;45331 45330 QSPLGFEVHDEITVTR 16 0 1 Unmodified _QSPLGFEVHDEITVTR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 919.4703 2 914.465415 1826.91628 63748.58 0.56537 0.00051702 0.065228 5.9649E-05 0.6306 0.00057666 914.967271676026 919.469879781379 98.848 0.54278 98.848 98.666 99.209 0 118 30 6 0 0 0 0.0078919 1 55792 34.685 34.685 1 1.5583 1.2941 0 10942000 3825900 7116100 29013 69 10988 11288 45332 45332 QSPLGFEVHDEITVTR 16 0 1 Unmodified _QSPLGFEVHDEITVTR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.3161 3 609.979369 1826.91628 NaN NaN NaN 0.55584 0.00033905 NaN NaN NaN NaN 98.62 0.82063 98.62 98.306 99.127 -7.6294E-06 0 0 0 0.00047386 1 54733 63.145 53.088 1 NaN NaN 0 14456000 0 14456000 29014 69 10988 11288 45333 45333 QSQAINDLLEAIYPSVDKR 19 1 1 Unmodified _QSQAINDLLEAIYPSVDKR_ 0 0 1 Q2TB10;B7Z4V7;A0A087WXB4;C9JHX9;Q49A13;C9K0M9;Q4G0T8 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.723 3 720.714692 2159.12225 70585.2 0.7354 0.00053001 -0.25662 -0.00018495 0.47877 0.00034506 721.049443467334 727.056481696762 131.34 0.37389 131.34 131.15 131.53 0 94 16 8 0 0 0 0.0013541 1 79747 31.48 31.48 1 1.918 1.6376 0 2843100 1290400 1552700 29015 1777 10989 11289 45334 45334 QSQAINDLLEAIYPSVDKR 19 1 1 Unmodified _QSQAINDLLEAIYPSVDKR_ 0 0 1 Q2TB10;B7Z4V7;A0A087WXB4;C9JHX9;Q49A13;C9K0M9;Q4G0T8 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 726.7231 3 720.714692 2159.12225 70690.86 0.99052 0.00071388 -0.27761 -0.00020008 0.71291 0.0005138 721.049839435409 727.056642602002 131.12 0.39557 131.12 130.88 131.28 0 86 18 9 0 0 0 0.0019387 1 78615 28.813 24.627 1 1.5367 1.287 0 5580800 2250600 3330200 29016 1777 10989 11289 45335 45335 QSQQEAEEEEREEEEEAQIIQR 22 0 2 Unmodified _QSQQEAEEEEREEEEEAQIIQR_ 0 0 1 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 913.4177 3 906.409273 2716.20599 63753.71 0.48005 0.00043512 -0.19167 -0.00017373 0.28838 0.00026139 906.743439614077 913.415706297817 62.904 0.61066 62.904 62.617 63.228 0 351 58 8 0 0 0 9.4713E-09 1 35979 74.048 74.048 1 0.91564 0.99445 0 33086000 18217000 14869000 29017 2063 10990 11290 45336 45336 QSQQEAEEEEREEEEEAQIIQR 22 0 2 Unmodified _QSQQEAEEEEREEEEEAQIIQR_ 0 0 1 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 906.4107 3 906.409273 2716.20599 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.664 1 62.664 62.164 63.164 0 0 0 0 0.0013319 1 35980 46.833 40.11 1 29018 2063 10990 11290 45337 45337 QSQQEAEEEEREEEEEAQIIQR 22 0 2 Unmodified _QSQQEAEEEEREEEEEAQIIQR_ 0 0 1 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.4153 3 906.409273 2716.20599 63251.76 0.58962 0.00053444 0.01263 1.1448E-05 0.60225 0.00054589 906.743679336435 913.415755776785 61.676 0.58371 61.676 61.376 61.96 0 362 53 8 0 0 0 6.0894E-12 4 35988 96.379 94.634 1 0.966 1.1103 0 56268000 27909000 28359000 29019 2063 10990 11290 45338;45339;45340;45341 45338 QSQQEAEEEEREEEEEAQIIQR 22 0 2 Unmodified _QSQQEAEEEEREEEEEAQIIQR_ 0 0 1 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 913.7515 3 906.409273 2716.20599 63006.66 0.52567 0.00047648 -0.24191 -0.00021927 0.28376 0.0002572 906.743110910506 913.41567728241 74.007 0.95599 74.007 73.685 74.641 0 471 64 12 0 0 0 2.5368E-08 1 39087 67.864 67.864 1 1.2232 1.001 0 33780000 14763000 19016000 29020 2063 10990 11290 45342 45342 QSQQEAEEEEREEEEEAQIIQR 22 0 2 Unmodified _QSQQEAEEEEREEEEEAQIIQR_ 0 0 1 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 913.0814 3 906.409273 2716.20599 63449.59 0.30111 0.00027293 -0.16948 -0.00015362 0.13163 0.00011931 906.743210864293 913.415751813345 74.564 0.81506 74.564 74.278 75.093 0 341 48 12 0 0 0 0.019042 2 38667 20.891 20.891 1 1.1487 1.0703 0 32080000 14689000 17391000 29021 2063 10990 11290 45343;45344 45344 QSSSTNYTNELK 12 1 0 Unmodified _QSSSTNYTNELK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 690.329 2 686.32297 1370.63139 NaN NaN NaN 0.015711 1.0783E-05 NaN NaN NaN NaN 38.188 0.75122 38.188 37.764 38.515 0 0 0 0 0.023957 1 17174 49.777 42.648 1 NaN NaN 0 11009000 0 11009000 29022 1010 10991 11291 45345 45345 QSSVTQVTEQSPK 13 1 0 Unmodified _QSSVTQVTEQSPK_ 0 0 0 Q14966;D6W5H1;A8K583;A0A096LPH6;B4DF54;C9JWN0 Q14966 Q14966 ZNF638 Zinc finger protein 638 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.868 2 709.85972 1417.70489 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.598 1 27.598 27.098 28.098 0 0 0 0 0.001183 1 12875 76.143 55.839 1 29023 1746 10992 11292 45346 45346 QSVEADINGLR 11 0 1 Unmodified _QSVEADINGLR_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3113 2 601.312209 1200.60986 NaN NaN NaN -0.25339 -0.00015237 NaN NaN NaN NaN 59.953 1.1937 59.953 59.356 60.55 0 0 0 0 0.00029952 1 35171 91.584 72.49 1 NaN NaN 0 16222000 16222000 0 + 29024 1161 10993 11293 45347 45347 QSVEADINGLR 11 0 1 Unmodified _QSVEADINGLR_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.3121 2 601.312209 1200.60986 NaN NaN NaN 0.17869 0.00010745 NaN NaN NaN NaN 71.635 1.069 71.635 71.289 72.358 7.6294E-06 0 0 0 5.1511E-05 1 37079 99.013 85.01 1 NaN NaN 0 6862000 6862000 0 + 29025 1161 10993 11293 45348 45348 QSVEADINGLRR 12 0 2 Unmodified _QSVEADINGLRR_ 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3629 2 679.362764 1356.71098 NaN NaN NaN 0.0039213 2.664E-06 NaN NaN NaN NaN 47.138 0.46727 47.138 46.919 47.386 0 0 0 0 0.012158 1 25492 54.191 25.494 1 NaN NaN 0 55077000 55077000 0 + 29026 1161 10994 11294 45349 45349 QSVEADINGLRR 12 0 2 Unmodified _QSVEADINGLRR_ 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 453.2441 3 453.244268 1356.71098 NaN NaN NaN -0.34508 -0.0001564 NaN NaN NaN NaN 55.117 0.6212 55.117 54.838 55.459 0 0 0 0 0.0059734 1 27500 40.725 33.354 1 NaN NaN 0 17220000 17220000 0 + 29027 1161 10994 11294 45350 45350 QSVEADINGLRR 12 0 2 Unmodified _QSVEADINGLRR_ 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.3626 2 679.362764 1356.71098 NaN NaN NaN -0.38758 -0.00026331 NaN NaN NaN NaN 55.528 0.58387 55.528 55.278 55.861 -3.8147E-06 0 0 0 0.0038572 1 27133 65.157 44.287 1 NaN NaN 0 20414000 20414000 0 + 29028 1161 10994 11294 45351 45351 QSVEADINGLRR 12 0 2 Unmodified _QSVEADINGLRR_ 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 453.2442 3 453.244268 1356.71098 NaN NaN NaN -0.16511 -7.4836E-05 NaN NaN NaN NaN 55.535 0.61016 55.535 55.278 55.888 0 0 0 0 0.0045414 1 27162 42.095 34.371 1 NaN NaN 0 16295000 16295000 0 + 29029 1161 10994 11294 45352 45352 QSVENDIHGLR 11 0 1 Unmodified _QSVENDIHGLR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.3268 2 634.323108 1266.63166 76071.33 0.70448 0.00044687 0.086502 5.487E-05 0.79098 0.00050174 634.323075126286 639.327377205543 36.227 0.40499 36.227 36.024 36.429 0 175 37 6 0 0 0 0.00018749 2 18228 76.228 53.175 1 1.0273 1.1331 0 55419000 26648000 28771000 29030 316 10995 11295 45353;45354 45354 QSVENDIHGLR 11 0 1 Unmodified _QSVENDIHGLR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.5537 3 423.217831 1266.63166 91261.84 0.24474 0.00010358 -0.13156 -5.5678E-05 0.11318 4.7901E-05 423.21772988686 426.553848528115 36.234 1.0608 36.234 35.888 36.949 0 299 60 7 0 0 0 0.0012533 2 18277 58.676 48.066 1 0.99412 1.1421 0 140980000 69462000 71516000 29031 316 10995 11295 45355;45356 45356 QSVENDIHGLR 11 0 1 Unmodified _QSVENDIHGLR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.2177 3 423.217831 1266.63166 91774.92 0.19533 8.2666E-05 0.076502 3.2377E-05 0.27183 0.00011504 423.217803707453 426.553919782428 35.04 0.96913 35.04 34.395 35.365 0 250 47 8 0 0 0 0.010584 2 17739 36.847 28.334 1 0.97474 1.1164 0 169120000 77228000 91893000 29032 316 10995 11295 45357;45358 45357 QSVENDIHGLR 11 0 1 Unmodified _QSVENDIHGLR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.3278 2 634.323108 1266.63166 75987.35 0.75617 0.00047966 -0.021895 -1.3889E-05 0.73427 0.00046577 634.323077612525 639.327469466206 35.049 0.39163 35.049 34.831 35.223 -3.8147E-06 127 33 6 0 0 0 3.4594E-23 1 17812 167.93 127.21 1 0.96902 1.1137 0 77149000 39720000 37428000 29033 316 10995 11295 45359 45359 QSVENDIHGLRK 12 1 1 Unmodified _QSVENDIHGLRK_ 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.9237 3 465.916152 1394.72663 88088.59 0.14263 6.6453E-05 0.28117 0.000131 0.4238 0.00019745 465.916208844817 471.923614560917 25.56 0.37096 25.56 25.393 25.763 -1.9073E-06 116 20 8 0 0 0 0.0025912 3 11155 46.481 46.481 1 1.1897 1.408 0 39693000 16451000 23242000 29034 316 10996 11296 45360;45361;45362 45360 QSVENDIHGLRK 12 1 1 Unmodified _QSVENDIHGLRK_ 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.916 3 465.916152 1394.72663 88235.61 0.66326 0.00030902 -0.32421 -0.00015106 0.33905 0.00015797 465.915969142179 471.923600916353 24.715 0.34697 24.715 24.533 24.88 0 86 16 8 0 0 0 0.00026206 1 10383 62.14 40.509 1 0.99123 1.1549 0 43660000 21167000 22492000 29035 316 10996 11296 45363 45363 QSVENDIHGLRK 12 1 1 Unmodified _QSVENDIHGLRK_ 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.9237 3 465.916152 1394.72663 87290.81 0.19006 8.8554E-05 0.091513 4.2637E-05 0.28158 0.00013119 465.915919423057 471.923796364671 28.495 0.80639 28.495 27.974 28.781 0 125 43 7 0 0 0 0.016558 1 11373 30.004 30.004 1 2.105 1.7648 0 3362300 1090700 2271600 29036 316 10996 11296 45364 45364 QSVFAILR 8 0 1 Unmodified _QSVFAILR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.2836 2 467.279452 932.544351 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.11 1 94.11 93.61 94.61 0 0 0 0 0.025562 1 58469 65.038 20.591 1 29037 1412 10997 11297 45365 45365 QSVFAILR 8 0 1 Unmodified _QSVFAILR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 472.2841 2 467.279452 932.544351 90902.66 0.43101 0.0002014 0.15538 7.2608E-05 0.5864 0.00027401 467.279475261516 472.283636642491 108.74 0.61229 108.74 108.38 108.99 0 90 29 5 0 0 0 0.032472 1 62482 50.607 16.81 1 1.5491 1.3431 0 2485500 984790 1500700 29038 1412 10997 11297 45366 45366 QTAAQLILK 9 1 0 Unmodified _QTAAQLILK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.3135 2 493.305667 984.596781 84934.64 0.21707 0.00010708 0.12525 6.1789E-05 0.34233 0.00016887 493.305704639196 497.312721154251 65.442 1.3575 65.442 65.039 66.396 -7.6294E-06 631 123 9 0 0 0 0.00067697 3 37570 95.909 85.922 1 1.078 1.2784 0 489800000 235510000 254290000 29039 1401 10998 11298 45367;45368;45369 45368 QTAAQLILK 9 1 0 Unmodified _QTAAQLILK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.3125 2 493.305667 984.596781 84198.58 0.19717 9.7266E-05 0.3326 0.00016407 0.52977 0.00026134 493.305782321015 497.312843826345 64.031 1.3475 64.031 63.602 64.95 0 653 122 9 0 0 0 0.0018755 2 37514 79.713 66.716 1 1.1244 1.3239 0 464510000 218770000 245740000 29040 1401 10998 11298 45370;45371 45370 QTAAQLILK 9 1 0 Unmodified _QTAAQLILK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.3132 2 493.305667 984.596781 85410.75 0.30287 0.00014941 -0.36688 -0.00018098 -0.064005 -3.1574E-05 493.305749688756 497.312411369196 75.05 1.7327 75.05 74.726 76.459 0 650 125 10 0 0 0 0.0015079 2 39762 84.498 73.276 1 1.0994 0.96544 0 220450000 101870000 118580000 29041 1401 10998 11298 45372;45373 45372 QTAAQLILK 9 1 0 Unmodified _QTAAQLILK_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.3058 2 493.305667 984.596781 85954.35 0.064871 3.2001E-05 -0.10975 -5.4139E-05 -0.044877 -2.2138E-05 493.305805780518 497.312567413438 75.255 1.7086 75.255 74.918 76.627 0 648 120 10 0 0 0 1.656E-06 3 39119 136.27 108.05 1 1.103 0.95176 0 200590000 93557000 107030000 29042 1401 10998 11298 45374;45375;45376 45375 QTALYTLK 8 1 0 Unmodified _QTALYTLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.2789 2 469.271293 936.528032 88064.73 0.21784 0.00010223 0.044438 2.0853E-05 0.26228 0.00012308 469.271104704366 473.278444481809 60.09 0.5709 60.09 59.757 60.328 0 190 39 6 0 0 0 0.060096 1 29997 40.067 22.682 1 1.1436 0.93277 0 7824700 3640600 4184000 29043 897 10999 11299 45377 45377 QTAPSGLSTLPQR 13 0 1 Unmodified _QTAPSGLSTLPQR_ 0 0 0 B2RC06;Q96GD4;J3KTD6;J3KRF8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.3674 2 678.367515 1354.72048 73664.04 0.44866 0.00030436 0.80655 0.00054714 1.2552 0.00085149 678.367448166586 683.371614321579 52.538 0.78355 52.538 52.102 52.886 0 307 57 8 0 0 0 6.8805E-09 2 29185 118.28 104.93 1 0.99538 1.1339 0 116940000 61292000 55649000 29044 881;1967 11000 11300 45378;45379 45379 QTAPSGLSTLPQR 13 0 1 Unmodified _QTAPSGLSTLPQR_ 0 0 0 B2RC06;Q96GD4;J3KTD6;J3KRF8 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.3711 2 678.367515 1354.72048 NaN NaN NaN -0.93599 -0.00063495 NaN NaN NaN NaN 51.063 0.63927 51.063 50.877 51.516 0 0 0 0 6.9643E-09 1 28890 109.16 86.627 1 NaN NaN 0 50093000 0 50093000 29045 881;1967 11000 11300 45380 45380 QTASVTLQAIAAQNAAVQAVNAHSNILK 28 1 0 Unmodified _QTASVTLQAIAAQNAAVQAVNAHSNILK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DT20;Q05DN3 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 945.1789 3 944.849061 2831.52535 62501.96 0.73434 0.00069384 -0.41342 -0.00039062 0.32092 0.00030322 945.516566408009 947.854543825015 124.25 0.39688 124.25 124.04 124.44 0 109 15 13 0 0 0 0.0041242 1 74390 23.149 23.149 1 1.8657 1.4904 0 20295000 7497900 12798000 29046 1774;1029;1128 11001 11301 45381 45381 QTATQLLK 8 1 0 Unmodified _QTATQLLK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.7697 2 451.768917 901.523281 89016.24 0.25562 0.00011548 0.10649 4.8108E-05 0.36211 0.00016359 451.768812441419 455.775878453588 37.526 0.93414 37.526 37.122 38.056 0 394 77 7 0 0 0 0.0035323 2 18964 96.492 47.93 1 0.89313 1.0299 0 216040000 117000000 99040000 29047 1648 11002 11302 45382;45383 45382 QTATQLLK 8 1 0 Unmodified _QTATQLLK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.7758 2 451.768917 901.523281 89413.48 0.36296 0.00016397 0.17164 7.7541E-05 0.5346 0.00024151 451.768868956061 455.775916546074 36.603 0.90157 36.603 36.256 37.157 0 366 71 7 0 0 0 0.0052486 2 18732 91.064 41.415 1 0.8601 1.0121 0 386390000 203060000 183330000 29048 1648 11002 11302 45384;45385 45385 QTATQLLK 8 1 0 Unmodified _QTATQLLK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 451.7692 2 451.768917 901.523281 87582.34 0.099846 4.5107E-05 -0.10385 -4.6915E-05 -0.0040005 -1.8073E-06 451.768855351877 455.775850481271 42.387 1.0975 42.387 42.062 43.159 0 400 77 8 0 0 0 0.043467 2 19685 46.129 8.2588 1 0.80582 0.6722 0 48802000 27142000 21661000 29049 1648 11002 11302 45386;45387 45386 QTATQLLK 8 1 0 Unmodified _QTATQLLK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 455.7761 2 451.768917 901.523281 88418.39 -0.27119 -0.00012252 0.27793 0.00012556 0.0067382 3.0441E-06 451.768968636756 455.776039493115 42.387 0.95197 42.387 42.002 42.954 0 386 67 8 0 0 0 0.035324 2 19200 49.097 18.237 1 0.79267 0.66103 0 41431000 22774000 18658000 29050 1648 11002 11302 45388;45389 45389 QTDVGITHFR 10 0 1 Unmodified _QTDVGITHFR_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 395.2079 3 391.871883 1172.59382 95573.67 0.31719 0.0001243 -0.30693 -0.00012028 0.010255 4.0188E-06 391.871719744458 395.207888634051 39.007 0.3311 39.007 38.871 39.202 -3.8147E-06 118 27 7 0 0 0 0.02309 1 20606 33.039 27.726 1 0.84167 0.92119 0 33268000 17483000 15785000 29051 1854 11003 11303 45390 45390 QTELFAHFIQPAAQK 15 1 0 Unmodified _QTELFAHFIQPAAQK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.6449 3 576.973778 1727.8995 NaN NaN NaN -0.54548 -0.00031473 NaN NaN NaN NaN 87.951 0.74952 87.951 87.647 88.396 7.6294E-06 0 0 0 0.0084754 1 53104 40.941 29.836 1 NaN NaN 0 24904000 0 24904000 29052 1391 11004 11304 45391 45391 QTELFAHFIQPAAQK 15 1 0 Unmodified _QTELFAHFIQPAAQK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.9805 3 576.973778 1727.8995 NaN NaN NaN -0.51703 -0.00029831 NaN NaN NaN NaN 86.556 0.61314 86.556 86.322 86.935 0 0 0 0 0.021229 1 53369 32.932 26.634 1 NaN NaN 0 18923000 0 18923000 29053 1391 11004 11304 45392 45392 QTELFAHFIQPAAQK 15 1 0 Unmodified _QTELFAHFIQPAAQK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.6453 3 576.973778 1727.8995 77339.22 0.32666 0.00018848 0.017346 1.0008E-05 0.34401 0.00019848 577.308444002404 579.644940849272 100.21 0.7108 100.21 99.9 100.61 7.6294E-06 145 59 4 0 0 0 0.047653 1 56664 11.279 11.279 1 4.6825 3.7021 0 10566000 1981100 8584600 29054 1391 11004 11304 45393 45393 QTFEAAILTQLHPR 14 0 1 Unmodified _QTFEAAILTQLHPR_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.2983 3 542.298373 1623.87329 NaN NaN NaN -0.37359 -0.0002026 NaN NaN NaN NaN 102.05 0.51066 102.05 101.62 102.13 7.6294E-06 0 0 0 0.027097 1 62608 32.734 26.436 1 NaN NaN 0 3623300 3623300 0 29055 2056 11005 11305 45394 45394 QTFEAAILTQLHPR 14 0 1 Unmodified _QTFEAAILTQLHPR_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.298 3 542.298373 1623.87329 84316.6 0.47803 0.00025923 -0.20562 -0.00011151 0.2724 0.00014772 542.298143552525 545.968758954223 100.83 0.42801 100.83 100.57 100.99 0 118 32 5 0 0 0 0.0023321 1 63395 39.947 39.947 1 0.88048 0.89067 0 9574400 4887800 4686600 29056 2056 11005 11305 45395 45395 QTFEAAILTQLHPR 14 0 1 Unmodified _QTFEAAILTQLHPR_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.2986 3 542.298373 1623.87329 82281.48 0.64948 0.00035221 -1.0297 -0.00055842 -0.38024 -0.0002062 542.298124724772 545.634216223674 113.64 0.6035 113.64 113.42 114.03 0 118 28 7 0 0 0 0.016851 1 65302 24.874 24.874 1 1.0123 0.86379 0 4540200 2080000 2460200 29057 2056 11005 11305 45396 45396 QTFLLQTTK 9 1 0 Unmodified _QTFLLQTTK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.3083 2 540.308406 1078.60226 82706.03 0.61099 0.00033012 0.83207 0.00044958 1.4431 0.0007797 540.308386466063 544.316390936193 63.277 0.61846 63.277 62.995 63.613 -3.8147E-06 206 50 6 0 0 0 0.0014178 1 37217 85.67 77.207 1 0.73126 0.76905 0 35022000 19580000 15442000 29058 168 11006 11306 45397 45397 QTFLLQTTK 9 1 0 Unmodified _QTFLLQTTK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.3157 2 540.308406 1078.60226 81712.53 0.50311 0.00027184 -0.00086577 -4.6778E-07 0.50225 0.00027137 540.308353201679 544.315367587401 74.061 0.65428 74.061 73.774 74.428 0 256 49 7 0 0 0 0.00013184 2 38420 113.74 97.858 1 1.8945 1.5598 0 10449000 3453500 6995100 29059 168 11006 11306 45398;45399 45399 QTIQYIHPADAVK 13 1 0 Unmodified _QTIQYIHPADAVK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.4067 2 742.398815 1482.78308 71159.06 0.74972 0.00055659 0.062335 4.6277E-05 0.81205 0.00060286 742.39882197857 746.40603526283 51.732 0.51774 51.732 51.548 52.065 -3.8147E-06 197 42 6 0 0 0 1.1645E-09 2 28627 124.12 124.12 1 0.99723 1.0856 0 49098000 23598000 25500000 29060 2023;1687 11007 11307 45400;45401 45400 QTIQYIHPADAVK 13 1 0 Unmodified _QTIQYIHPADAVK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2685 3 495.268302 1482.78308 84597.08 0.34602 0.00017137 0.14057 6.9621E-05 0.48659 0.00024099 495.268287753595 497.939637282879 51.74 0.62374 51.74 51.464 52.088 0 281 51 7 0 0 0 0.0024162 2 28789 44.601 44.601 1 0.97296 1.0975 0 111530000 56883000 54643000 29061 2023;1687 11007 11307 45402;45403 45403 QTIQYIHPADAVK 13 1 0 Unmodified _QTIQYIHPADAVK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.4007 2 742.398815 1482.78308 71315.74 0.7855 0.00058315 0.34212 0.00025399 1.1276 0.00083715 742.398791238761 746.40631641991 50.053 0.34741 50.053 49.863 50.21 0 145 29 6 0 0 0 4.7182E-09 2 28140 132.62 132.62 1 0.94729 1.0559 0 51885000 25931000 25954000 29062 2023;1687 11007 11307 45404;45405 45404 QTIQYIHPADAVK 13 1 0 Unmodified _QTIQYIHPADAVK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.3986 2 742.398815 1482.78308 69963.2 0.59861 0.00044441 0.028666 2.1282E-05 0.62727 0.00046569 742.398737614739 746.405931450319 59.848 0.76073 59.848 59.426 60.187 3.8147E-06 312 52 8 0 0 0 0.0020803 1 30584 65.842 65.842 1 1.4403 1.1199 0 12523000 5656800 6866000 29063 2023;1687 11007 11307 45406 45406 QTIQYIHPADAVK 13 1 0 Unmodified _QTIQYIHPADAVK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.9964 3 495.268302 1482.78308 84717.42 0.11599 5.7444E-05 -0.58509 -0.00028978 -0.46911 -0.00023233 495.268003064627 497.939384966294 59.828 0.93585 59.828 59.338 60.274 3.8147E-06 431 64 9 0 0 0 0.040187 1 30366 32.295 32.295 1 1.3728 1.1176 0 31141000 12902000 18239000 29064 2023;1687 11007 11307 45407 45407 QTIQYIHPADAVK 13 1 0 Unmodified _QTIQYIHPADAVK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.3987 2 742.398815 1482.78308 70376.26 0.55817 0.00041439 0.00068295 5.0702E-07 0.55886 0.00041489 742.398428358426 746.406000772187 60.267 0.7662 60.267 59.87 60.637 0 291 56 7 0 0 0 2.594E-09 1 30196 145.28 145.28 1 1.4327 1.1762 0 9257000 3641100 5615900 29065 2023;1687 11007 11307 45408 45408 QTLAAFVPLLLK 12 1 0 Unmodified _QTLAAFVPLLLK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.4133 2 657.413206 1312.81186 75397.63 1.2719 0.00083617 -0.37701 -0.00024785 0.8949 0.00058832 657.412797170183 661.419970800457 130.81 0.64857 130.81 130.6 131.25 0 244 41 8 0 0 0 1.3751E-12 2 85242 128.86 122.27 1 0.93037 1.0027 0 33939000 18218000 15721000 29066 908 11008 11308 45409;45410 45410 QTLAAFVPLLLK 12 1 0 Unmodified _QTLAAFVPLLLK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.4134 2 657.413206 1312.81186 75792.17 0.93292 0.00061332 -0.070067 -4.6063E-05 0.86286 0.00056725 657.413060931356 661.420155473763 130.32 0.58536 130.32 130.13 130.71 0 231 37 8 0 0 0 3.5801E-08 2 87038 117.31 112.11 1 0.94975 1.0549 0 49780000 25625000 24155000 29067 908 11008 11308 45411;45412 45412 QTLAAFVPLLLK 12 1 0 Unmodified _QTLAAFVPLLLK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.421 2 657.413206 1312.81186 74979.2 0.96935 0.00063727 -0.29527 -0.00019411 0.67409 0.00044315 657.413468023549 661.420342764646 134.85 0.13826 134.85 134.76 134.9 0 16 2 8 0 0 0 2.2866E-05 1 81680 102.06 102.06 1 1.574 1.3062 0 36136000 11935000 24201000 29068 908 11008 11308 45413 45413 QTLENERGELANEVK 15 1 1 Unmodified _QTLENERGELANEVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.9505 2 865.439397 1728.86424 65519.04 0.70023 0.000606 0.4434 0.00038373 1.1436 0.00098974 865.439767787797 874.95241950798 42.27 0.26331 42.27 42.076 42.339 0 48 19 5 0 0 0 0.042667 1 22369 48.44 44.908 1 2.0628 2.2146 0 13751000 3832300 9918800 29069 81 11009 11309 45414 45414 QTLENERGELANEVK 15 1 1 Unmodified _QTLENERGELANEVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.6374 3 577.295357 1728.86424 78347.29 0.60944 0.00035183 -0.29534 -0.0001705 0.3141 0.00018133 577.294768462882 583.302581126512 42.255 0.64832 42.255 41.944 42.592 0 229 49 6 0 0 0 0.0023985 1 22422 37.083 37.083 1 1.684 2.0143 0 54964000 20732000 34232000 29070 81 11009 11309 45415 45415 QTLENERGELANEVK 15 1 1 Unmodified _QTLENERGELANEVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.2969 3 577.295357 1728.86424 79200.59 0.81984 0.00047329 -0.59388 -0.00034284 0.22596 0.00013045 577.294955408109 583.302311688704 41.112 0.5495 41.112 40.84 41.389 0 179 45 5 0 0 0 0.0001025 1 22109 66.826 66.826 1 1.6629 1.9327 0 39318000 13651000 25667000 29071 81 11009 11309 45416 45416 QTLENERGELANEVK 15 1 1 Unmodified _QTLENERGELANEVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.4507 2 865.439397 1728.86424 NaN NaN NaN -0.13038 -0.00011284 NaN NaN NaN NaN 41.079 0.25444 41.079 40.952 41.207 0 0 0 0 7.7351E-16 1 22102 130.44 97.027 1 NaN NaN 0 11784000 0 11784000 29072 81 11009 11309 45417 45417 QTLENERGELANEVK 15 1 1 Unmodified _QTLENERGELANEVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.303 3 577.295357 1728.86424 78588.7 0.42992 0.00024819 -0.37145 -0.00021444 0.058475 3.3757E-05 577.29505190143 583.30282640856 50.009 0.67178 50.009 49.655 50.327 0 322 58 8 0 0 0 0.0036542 1 24384 35.891 35.891 1 2.8307 2.4446 0 13560000 3577100 9982800 29073 81 11009 11309 45418 45418 QTLENERGELANEVK 15 1 1 Unmodified _QTLENERGELANEVK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.6371 3 577.295357 1728.86424 78748.38 0.16791 9.6936E-05 -0.022224 -1.283E-05 0.14569 8.4106E-05 577.295190398293 583.302981184008 50.419 0.71565 50.419 50.093 50.808 0 312 59 7 0 0 0 0.011037 1 24040 29.733 29.733 1 2.5838 2.1875 0 12957000 2981500 9975300 29074 81 11009 11309 45419 45419 QTLPYSVADLEWDAGHK 17 1 0 Unmodified _QTLPYSVADLEWDAGHK_ 0 0 0 Q9Y483;Q96G26;B4DZG1;B4DZ69;Q7Z534 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.6545 3 643.98289 1928.92684 NaN NaN NaN 0.15712 0.00010118 NaN NaN NaN NaN 112.52 0.38518 112.52 112.32 112.71 0 0 0 0 0.039118 1 64452 25.995 22.139 1 NaN NaN 0 3356300 0 3356300 29075 2143 11010 11310 45420 45420 QTLQEDLLR 9 0 1 Unmodified _QTLQEDLLR_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;V9H068;V9H0D5;V9H023;B4DL39;B4DSB9;Q0ZAJ1 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.3105 2 558.306395 1114.59824 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.122 1 70.122 69.622 70.622 0 0 0 0 0.019936 1 40777 56.258 29.004 1 29076 1237 11011 11311 45421 45421 QTLQSEQPLQVAR 13 0 1 Unmodified _QTLQSEQPLQVAR_ 0 0 0 A0A140VK70;P35998;Q75L23;C9JLS9;B7Z571 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.4087 2 749.404629 1496.79471 NaN NaN NaN -1.0091 -0.00075625 NaN NaN NaN NaN 56.626 0.49822 56.626 56.329 56.827 0 0 0 0 2.2129E-14 2 31867 128.03 76.599 1 NaN NaN 0 2835200 0 2835200 29077 620 11012 11312 45422;45423 45422 QTLQSEQPLQVAR 13 0 1 Unmodified _QTLQSEQPLQVAR_ 0 0 0 A0A140VK70;P35998;Q75L23;C9JLS9;B7Z571 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.4089 2 749.404629 1496.79471 NaN NaN NaN -1.3153 -0.0009857 NaN NaN NaN NaN 55.675 0.50972 55.675 55.477 55.987 0 0 0 0 6.9708E-21 2 31936 138.22 94.922 1 NaN NaN 0 8188700 0 8188700 29078 620 11012 11312 45424;45425 45425 QTLQSEQPLQVAR 13 0 1 Unmodified _QTLQSEQPLQVAR_ 0 0 0 A0A140VK70;P35998;Q75L23;C9JLS9;B7Z571 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 754.4089 2 749.404629 1496.79471 71327.74 0.85435 0.00064025 -0.57349 -0.00042978 0.28085 0.00021047 749.90559806371 754.408457071454 65.995 0.46856 65.995 65.736 66.204 0 123 33 6 0 0 0 0.00036536 1 34150 62.466 53.766 1 2.3071 2.0018 0 2434900 844200 1590700 29079 620 11012 11312 45426 45426 QTLQSEQPLQVAR 13 0 1 Unmodified _QTLQSEQPLQVAR_ 0 0 0 A0A140VK70;P35998;Q75L23;C9JLS9;B7Z571 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.4089 2 749.404629 1496.79471 71345.32 0.41826 0.00031344 -0.20406 -0.00015293 0.2142 0.00016052 749.906299034043 754.408698104006 66.536 0.48241 66.536 66.268 66.751 0 118 32 5 0 0 0 0.0015917 1 33754 57.203 48.474 1 2.0316 1.8311 0 2054600 735700 1318900 29080 620 11012 11312 45427 45427 QTLSTPGTIILGTIPVPK 18 1 0 Unmodified _QTLSTPGTIILGTIPVPK_ 0 0 0 Q5TDE9;Q5TDF0;Q9BSD7 Q5TDE9 Q5TDE9 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.5535 2 918.545677 1835.0768 67098.17 0.5722 0.00052559 0.47059 0.00043226 1.0428 0.00095785 918.545961093066 923.054273246129 124.16 0.38512 124.16 123.98 124.37 -7.6294E-06 72 26 4 0 0 0 0.0018472 1 80533 36.284 30.791 1 1.6171 1.6357 0 4753100 1895600 2857500 29081 1826 11013 11313 45428 45428 QTLTFFDELHNVGR 14 0 1 Unmodified _QTLTFFDELHNVGR_ 0 0 0 A8K1M4;Q9H081 A8K1M4 A8K1M4 MIS12 Protein MIS12 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.9529 3 559.617883 1675.83182 81517.7 0.89295 0.00049971 0.23991 0.00013426 1.1329 0.00063396 559.952072786507 562.95412228257 112.91 0.40364 112.91 112.71 113.11 0 75 17 6 0 0 0 0.0028805 1 65685 39.033 39.033 1 1.1726 0.98734 0 3063300 1513400 1549900 29082 704 11014 11314 45429 45429 QTLTFFDELHNVGR 14 0 1 Unmodified _QTLTFFDELHNVGR_ 0 0 0 A8K1M4;Q9H081 A8K1M4 A8K1M4 MIS12 Protein MIS12 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.953 3 559.617883 1675.83182 81183.44 0.68463 0.00038313 -0.2003 -0.00011209 0.48433 0.00027104 559.952012427494 562.953915203993 112.69 0.34087 112.69 112.53 112.87 -7.6294E-06 63 15 6 0 0 0 0.0002277 1 64596 57.136 57.136 1 0.97329 0.83345 0 2851900 1257500 1594400 29083 704 11014 11314 45430 45430 QTMLFSATQTR 11 0 1 Oxidation (M) _QTM(ox)LFSATQTR_ QTM(1)LFSATQTR QTM(67.21)LFSATQTR 0 1 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.322 2 650.321719 1298.62889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.624 1 48.624 48.124 49.124 0 0 0 0 0.0014673 1 26539 67.207 51.545 1 29084 303 11015 11315 45431 45431 224 QTMLFSATQTR 11 0 1 Oxidation (M) _QTM(ox)LFSATQTR_ QTM(1)LFSATQTR QTM(50.11)LFSATQTR 0 1 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.8272 2 650.321719 1298.62889 NaN NaN NaN 0.85219 0.00055419 NaN NaN NaN NaN 47.607 0.62416 47.607 47.168 47.792 0 0 0 0 0.0094208 1 26200 50.108 38.956 1 NaN NaN 0 20030000 0 20030000 29085 303 11015 11315 45432 45432 224 QTMLFSATQTR 11 0 1 Oxidation (M) _QTM(ox)LFSATQTR_ QTM(1)LFSATQTR QTM(60.6)LFSATQTR 0 1 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.3264 2 650.321719 1298.62889 74882.89 0.7411 0.00048195 -0.38166 -0.0002482 0.35944 0.00023375 650.321642122026 655.325782267247 55.602 0.68853 55.602 55.302 55.991 3.8147E-06 124 42 5 0 0 0 0.001457 2 27855 60.598 60.598 1 1.1059 0.94168 0 5457500 2416100 3041400 29086 303 11015 11315 45433;45434 45433 224 QTMLFSATQTR 11 0 1 Unmodified _QTMLFSATQTR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.3297 2 642.324262 1282.63397 73864.04 0.70622 0.00045362 -0.89802 -0.00057682 -0.1918 -0.0001232 642.322935194271 647.327985332409 73.967 0.68578 73.967 73.725 74.41 0 193 46 6 0 0 0 0.0048085 1 39089 57.348 53.585 1 1.5504 1.3017 0 4250600 1431000 2819600 29087 303 11015 11316 45435 45435 QTMLFSATQTR 11 0 1 Unmodified _QTMLFSATQTR_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.329 2 642.324262 1282.63397 72329.49 0.53557 0.00034401 -0.079651 -5.1162E-05 0.45592 0.00029285 642.323556336551 647.328583383765 74.318 0.68186 74.318 74.064 74.746 0 161 44 4 0 0 0 0.00048456 2 38583 74.841 74.841 1 1.6642 1.4716 0 3940400 1325200 2615200 29088 303 11015 11316 45436;45437 45437 QTNLENLDQAFSVAER 16 0 1 Unmodified _QTNLENLDQAFSVAER_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 922.9563 2 917.950129 1833.88571 NaN NaN NaN -0.00054269 -4.9816E-07 NaN NaN NaN NaN 102.52 0.48679 102.52 102.24 102.73 0 0 0 0 0.0069889 1 64669 51.546 36.67 1 NaN NaN 0 5665000 0 5665000 29089 1754 11016 11317 45438 45438 QTPAPAASVTGSR 13 0 1 Unmodified _QTPAPAASVTGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.83 2 621.825483 1241.63641 NaN NaN NaN 0.22123 0.00013756 NaN NaN NaN NaN 28.074 0.53882 28.074 27.838 28.377 -1.9073E-06 0 0 0 2.7846E-10 1 13079 117.94 70.122 1 NaN NaN 0 86544000 0 86544000 29090 1569 11017 11318 45439 45439 QTPAPAASVTGSR 13 0 1 Unmodified _QTPAPAASVTGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8295 2 621.825483 1241.63641 NaN NaN NaN 0.18993 0.0001181 NaN NaN NaN NaN 27.538 0.5187 27.538 27.239 27.757 0 0 0 0 2.8703E-15 1 12730 130.56 82.279 1 NaN NaN 0 97869000 0 97869000 29091 1569 11017 11318 45440 45440 QTPAPAASVTGSR 13 0 1 Unmodified _QTPAPAASVTGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8298 2 621.825483 1241.63641 75657.47 0.3798 0.00023617 -0.17024 -0.00010586 0.20956 0.00013031 621.825512213567 626.829516637607 31.668 0.99014 31.668 31.388 32.378 0 223 54 10 0 0 0 5.1559E-05 2 13310 96.604 96.604 1 2.9506 2.5463 0 82447000 22362000 60085000 29092 1569 11017 11318 45441;45442 45441 QTPAPAASVTGSR 13 0 1 Unmodified _QTPAPAASVTGSR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.8263 2 621.825483 1241.63641 76015.34 0.53442 0.00033232 -0.29985 -0.00018645 0.23457 0.00014586 621.825416792698 626.829367354943 31.787 0.78662 31.787 31.503 32.29 0 230 42 9 0 0 0 0.0069187 1 12961 45.653 41.636 1 2.939 2.5646 0 65479000 16865000 48614000 29093 1569 11017 11318 45443 45443 QTPDFHTVIGDTVTGLLER 19 0 1 Unmodified _QTPDFHTVIGDTVTGLLER_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.3643 3 700.363771 2098.06948 72983.72 0.88851 0.00062228 0.31608 0.00022137 1.2046 0.00084365 700.698080947827 703.700319033863 121.43 0.58572 121.43 121.13 121.72 0 224 37 8 0 0 0 0.0083988 1 78342 23.027 17.183 1 0.86941 0.96142 0 58801000 31652000 27148000 29094 2042 11018 11319 45444 45444 QTPDFHTVIGDTVTGLLER 19 0 1 Unmodified _QTPDFHTVIGDTVTGLLER_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.3604 3 700.363771 2098.06948 72760.34 0.91174 0.00063855 0.34457 0.00024132 1.2563 0.00087987 700.698049576664 703.70033134728 120.9 0.4877 120.9 120.66 121.15 7.6294E-06 194 29 8 0 0 0 0.0018837 1 79838 30.659 26.91 1 0.88417 0.98822 0 44567000 23210000 21357000 29095 2042 11018 11319 45445 45445 QTPDFHTVIGDTVTGLLER 19 0 1 Unmodified _QTPDFHTVIGDTVTGLLER_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.0349 3 700.363771 2098.06948 71941.34 0.75019 0.0005254 0.38964 0.00027289 1.1398 0.0007983 700.698323265401 703.70021495613 133.65 0.60086 133.65 133.39 134 0 176 23 11 0 0 0 9.5738E-07 2 81335 58.848 58.848 1 1.2371 1.0427 0 28332000 12235000 16097000 29096 2042 11018 11319 45446;45447 45446 QTPDFHTVIGDTVTGLLER 19 0 1 Unmodified _QTPDFHTVIGDTVTGLLER_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.6989 3 700.363771 2098.06948 72094.13 1.0368 0.00072615 0.324 0.00022692 1.3608 0.00095307 700.698211751062 703.700339184746 133.38 0.58109 133.38 133.13 133.71 0 133 22 10 0 0 0 1.0529E-05 1 80286 53.909 53.909 1 1.248 1.0886 0 31752000 14863000 16889000 29097 2042 11018 11319 45448 45448 QTPNDLTGEHSCIMLK 16 1 0 Oxidation (M) _QTPNDLTGEHSCIM(ox)LK_ QTPNDLTGEHSCIM(1)LK QTPNDLTGEHSCIM(51.59)LK 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.6252 3 620.625721 1858.85533 80716.65 0.24083 0.00014947 -0.24663 -0.00015307 -0.005802 -3.6009E-06 620.959973635042 623.296953978674 53.497 0.46981 53.497 53.249 53.718 3.8147E-06 144 45 4 0 0 0 9.5781E-05 1 30588 51.591 51.591 1 1.1041 1.1021 0 14665000 7043400 7621600 29098 2023 11019 11320 45449 45449 1862 QTPNDLTGEHSCIMLK 16 1 0 Unmodified _QTPNDLTGEHSCIMLK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.6287 3 615.294083 1842.86042 77995.94 0.45029 0.00027706 -0.3111 -0.00019142 0.13919 8.5645E-05 615.62838948922 618.299837658735 73.361 0.41629 73.362 73.138 73.555 7.6294E-06 139 27 7 0 0 0 0.011138 1 37964 23.81 22.997 1 1.5467 1.2051 0 3598100 1359800 2238300 29099 2023 11019 11321 45450 45450 QTQATTLVHQIFGGYLR 17 0 1 Unmodified _QTQATTLVHQIFGGYLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7EMM6 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.6852 3 645.014525 1932.02175 NaN NaN NaN 0.5882 0.0003794 NaN NaN NaN NaN 112.27 0.48045 112.27 111.96 112.44 0 0 0 0 0.013982 2 72686 32.815 22.126 1 NaN NaN 0 5009100 0 5009100 29100 260 11020 11322 45451;45452 45452 QTQATTLVHQIFGGYLR 17 0 1 Unmodified _QTQATTLVHQIFGGYLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7EMM6 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.3492 3 645.014525 1932.02175 73705.05 0.86315 0.00055674 0.5035 0.00032477 1.3667 0.00088151 645.348854032734 648.351281593441 123.9 0.77552 123.9 123.46 124.24 0 105 32 7 0 0 0 0.00039769 2 74135 41.871 41.871 1 1.2652 1.0497 0 11023000 4622600 6400500 29101 260 11020 11322 45453;45454 45454 QTQATTLVHQIFGGYLR 17 0 1 Unmodified _QTQATTLVHQIFGGYLR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7EMM6 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.3513 3 645.014525 1932.02175 74124.95 0.81529 0.00052587 0.073623 4.7488E-05 0.88891 0.00057336 645.347832818148 648.351214916673 123.66 0.64386 123.66 123.19 123.84 0 84 26 6 0 0 0 0.00025467 2 73057 45.14 45.14 1 1.2918 1.0753 0 6203200 2739300 3463900 29102 260 11020 11322 45455;45456 45456 QTTLAFK 7 1 0 Unmodified _QTTLAFK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 404.7316 2 404.731803 807.449054 94204.34 -0.31786 -0.00012865 0.22649 9.1669E-05 -0.091364 -3.6978E-05 404.731784628618 408.738908543294 46.275 0.95695 46.275 45.875 46.832 0 300 61 9 0 0 0 0.058932 1 21798 50.966 25.967 1 1.3407 1.1054 0 12055000 5579400 6475700 29103 1471 11021 11323 45457 45457 QTTLAFKPIK 10 2 0 Unmodified _QTTLAFKPIK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 388.2436 3 382.900891 1145.68084 95663.67 -0.17995 -6.8904E-05 0.19125 7.3231E-05 0.011301 4.3274E-06 382.900924068482 388.24369049148 53.043 0.8182 53.043 52.75 53.569 0 308 62 8 0 0 0 0.03864 1 29461 28.204 22.989 1 0.71476 0.84349 0 119190000 61522000 57665000 29104 1471 11022 11324 45458 45458 QTTLAFKPIK 10 2 0 Unmodified _QTTLAFKPIK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.8483 2 573.847699 1145.68084 79734.13 0.24249 0.00013915 0.41315 0.00023709 0.65564 0.00037624 573.847831496897 581.862024906191 53.028 0.61844 53.028 52.824 53.443 -3.8147E-06 223 48 6 0 0 0 0.013374 2 29565 79.906 58.459 1 0.7596 0.89672 0 57859000 27570000 30290000 29105 1471 11022 11324 45459;45460 45459 QTTLAFKPIK 10 2 0 Unmodified _QTTLAFKPIK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 388.2437 3 382.900891 1145.68084 95983.91 0.15644 5.9901E-05 0.087038 3.3327E-05 0.24348 9.3228E-05 382.90087390138 388.243659625424 51.062 0.6491 51.062 50.734 51.383 0 282 51 8 0 0 0 0.0023627 2 28816 51.268 44.569 1 0.72305 0.84112 0 164110000 87039000 77066000 29106 1471 11022 11324 45461;45462 45462 QTTLAFKPIKK 11 3 0 Unmodified _QTTLAFKPIKK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 433.6132 3 425.599212 1273.77581 90524.11 -0.32969 -0.00014031 0.28387 0.00012082 -0.045816 -1.9499E-05 425.599320834779 433.613454484711 38.757 0.66283 38.757 38.462 39.125 0 270 51 8 0 0 0 0.0090911 2 17617 49.35 43.508 1 1.2777 1.1967 0 27317000 11320000 15997000 29107 1471 11023 11325 45463;45464 45463 QTVADQVLVGSYCVFSNQGGLVHPK 25 1 0 Unmodified _QTVADQVLVGSYCVFSNQGGLVHPK_ 0 0 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.7984 3 901.790155 2702.34863 63603.36 1.1092 0.0010003 -0.088389 -7.9709E-05 1.0208 0.00092054 902.124852819645 904.795623697636 111.41 0.515 111.41 111.17 111.68 7.6294E-06 181 36 8 0 0 0 1.803E-10 3 70093 61.437 61.437 1 0.92269 0.98216 0 16017000 8083100 7934100 29108 1619 11024 11326 45465;45466;45467 45466 QTVADQVLVGSYCVFSNQGGLVHPK 25 1 0 Unmodified _QTVADQVLVGSYCVFSNQGGLVHPK_ 0 0 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.1263 3 901.790155 2702.34863 64676.12 0.56568 0.00051012 0.05004 4.5125E-05 0.61572 0.00055525 902.124453969092 904.795866087291 110.82 0.49504 110.82 110.61 111.1 -7.6294E-06 216 36 9 0 0 0 0.00032807 1 71379 33.187 33.187 1 0.98534 1.035 0 19627000 9415000 10213000 29109 1619 11024 11326 45468 45468 QTVADQVLVGSYCVFSNQGGLVHPK 25 1 0 Unmodified _QTVADQVLVGSYCVFSNQGGLVHPK_ 0 0 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 902.123 3 901.790155 2702.34863 61207.12 0.56225 0.00050704 -0.9666 -0.00087167 -0.40434 -0.00036463 902.123695280669 904.795631400964 122.09 0.54088 122.09 121.88 122.42 0 177 26 11 0 0 0 2.8656E-16 2 71844 90.084 90.084 1 1.1617 0.98647 0 71667000 32866000 38801000 29110 1619 11024 11326 45469;45470 45470 QTVAVGVIK 9 1 0 Unmodified _QTVAVGVIK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q05639;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.7874 2 457.78711 913.559667 87539.09 0.11142 5.1008E-05 -0.56149 -0.00025704 -0.45007 -0.00020604 457.787094445199 461.793883976379 51.019 1.2683 51.019 50.68 51.948 0 432 114 9 0 0 0 0.0066845 2 28237 63.565 34.784 1 2.3899 2.8665 0 1019100000 283500000 735550000 29111 1658;1790 11025 11327 45471;45472 45472 QTVAVGVIK 9 1 0 Unmodified _QTVAVGVIK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q05639;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.7938 2 457.78711 913.559667 89880.42 0.48276 0.000221 -0.62822 -0.00028759 -0.14546 -6.6591E-05 457.78690256366 461.79384526405 49.684 1.1247 49.684 49.509 50.634 -3.8147E-06 372 97 9 0 0 0 0.019235 2 27915 51.346 25.452 1 2.5703 3.0369 0 1313800000 354170000 959640000 29112 1658;1790 11025 11327 45473;45474 45473 QTVAVGVIK 9 1 0 Unmodified _QTVAVGVIK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q05639;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 457.787 2 457.78711 913.559667 88837.41 0.25712 0.00011771 -0.47869 -0.00021914 -0.22157 -0.00010143 457.787000025066 461.793895360964 58.423 1.3256 58.423 58.177 59.503 0 316 103 9 0 0 0 0.017716 2 29677 52.716 33.154 1 1.6993 1.4766 0 139630000 53860000 85774000 29113 1658;1790 11025 11327 45475;45476 45476 QTVAVGVIK 9 1 0 Unmodified _QTVAVGVIK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q05639;Q14222;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 461.7941 2 457.78711 913.559667 88671.41 -0.018544 -8.4892E-06 -0.36433 -0.00016679 -0.38288 -0.00017528 457.786997028038 461.793974247495 58.746 0.98892 58.746 58.47 59.459 0 356 80 9 0 0 0 0.019235 2 29186 51.346 32.252 1 1.6937 1.4489 0 115110000 43469000 71641000 29114 1658;1790 11025 11327 45477;45478 45477 QTVEADVNGLR 11 0 1 Unmodified _QTVEADVNGLR_ 0 0 0 CON__P08779;P08779 CON__P08779 CON__P08779 KRT16 Keratin, type I cytoskeletal 16 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.312 2 601.312209 1200.60986 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.463 1 47.463 46.963 47.963 0 0 0 0 0.0030924 1 26383 67.334 41.775 1 + 29115 1159 11026 11328 45479 45479 QTYFLPVIGLVDAEK 15 1 0 Unmodified _QTYFLPVIGLVDAEK_ 0 0 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5;E9PMD8;E9PLG2 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.4666 2 846.963988 1691.91342 68371.34 0.78274 0.00066295 0.0010899 9.2309E-07 0.78383 0.00066388 846.963624382739 850.971005280047 129.8 0.46413 129.8 129.6 130.06 0 138 32 6 0 0 0 0.00021022 1 86717 75.819 75.819 1 2.3518 2.4152 0 9486600 2361200 7125400 29116 617 11027 11329 45480 45480 QTYSTEPNNLK 11 1 0 Unmodified _QTYSTEPNNLK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8248 2 647.817324 1293.62009 75001.46 0.7671 0.00049694 -0.35664 -0.00023104 0.41046 0.0002659 647.817342248734 651.823786131216 27.951 0.41082 27.951 27.746 28.157 -1.9073E-06 183 27 10 0 0 0 9.1144E-31 2 13000 177.7 158.35 1 0.84643 0.99619 0 320310000 168300000 152010000 29117 1572 11028 11330 45481;45482 45481 QTYSTEPNNLK 11 1 0 Unmodified _QTYSTEPNNLK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8231 2 647.817324 1293.62009 75174.57 0.45686 0.00029596 -0.28355 -0.00018369 0.17331 0.00011227 647.81730389132 651.824049894829 27.416 0.34031 27.416 27.269 27.609 0 118 17 10 0 0 0 5.3894E-53 2 12671 211.56 176.29 1 0.87607 1.0289 0 348860000 184640000 164230000 29118 1572 11028 11330 45483;45484 45484 QTYSTEPNNLK 11 1 0 Unmodified _QTYSTEPNNLK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.8168 2 647.817324 1293.62009 75766.59 0.75896 0.00049167 -0.07506 -4.8625E-05 0.6839 0.00044304 647.817438584522 651.82421745675 54.35 0.52703 54.35 54.052 54.579 0 172 44 6 0 0 0 0.030243 1 31008 38.776 28.545 1 0.68466 0.72965 0 23221000 14060000 9161200 29119 1572 11028 11330 45485 45485 QTYSTEPNNLK 11 1 0 Unmodified _QTYSTEPNNLK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.8174 2 647.817324 1293.62009 74500.55 0.46175 0.00029913 0.061618 3.9917E-05 0.52337 0.00033905 647.817527344964 651.824395897928 32.08 0.58096 32.08 31.797 32.378 0 204 30 10 0 0 0 0.00019291 2 13638 93.111 75.675 1 0.90047 0.78086 0 127530000 67877000 59648000 29120 1572 11028 11330 45486;45487 45487 QTYSTEPNNLK 11 1 0 Unmodified _QTYSTEPNNLK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.8176 2 647.817324 1293.62009 74411.71 0.60458 0.00039166 -0.22964 -0.00014877 0.37494 0.00024289 647.817280025933 651.824221685277 32.245 0.67155 32.245 32.003 32.675 0 220 34 11 0 0 0 2.3783E-08 2 13289 121.64 100.64 1 0.98489 0.84199 0 110550000 57786000 52769000 29121 1572 11028 11330 45488;45489 45489 QVAITGQLGVKPQTGNSIPLTATNFR 26 1 1 Unmodified _QVAITGQLGVKPQTGNSIPLTATNFR_ 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 910.8423 3 904.499481 2710.47661 66885.01 0.90479 0.00081838 -0.448 -0.00040521 0.45679 0.00041317 904.833699550619 910.840601935871 113.63 0.28508 113.63 113.48 113.76 -7.6294E-06 35 12 5 0 0 0 0.0014528 1 66225 24.276 11.599 1 1.0397 0.94526 0 1771700 773760 997960 29122 135 11029 11331 45490 45490 QVAITGQLGVKPQTGNSIPLTATNFR 26 1 1 Unmodified _QVAITGQLGVKPQTGNSIPLTATNFR_ 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 910.8401 3 904.499481 2710.47661 NaN NaN NaN -0.047308 -4.279E-05 NaN NaN NaN NaN 113.45 0.22475 113.46 113.33 113.56 7.6294E-06 0 0 0 0.026362 1 65180 28.951 21.758 1 NaN NaN 0 1532900 0 1532900 29123 135 11029 11331 45491 45491 QVATFHNQR 9 0 1 Unmodified _QVATFHNQR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.7838 2 550.783422 1099.55229 NaN NaN NaN 0.27366 0.00015073 NaN NaN NaN NaN 17.159 0.21904 17.159 17.047 17.266 0 0 0 0 0.015594 1 4364 62.338 31.264 1 NaN NaN 0 3945800 3945800 0 29124 2048 11030 11332 45492 45492 QVCQLPGLFSYAQHIASIDGR 21 0 1 Unmodified _QVCQLPGLFSYAQHIASIDGR_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.0699 3 787.39871 2359.1743 NaN NaN NaN -0.26728 -0.00021045 NaN NaN NaN NaN 118.36 0.37936 118.36 118.09 118.47 -7.6294E-06 0 0 0 6.5454E-13 1 77826 83.423 75.033 1 NaN NaN 0 4596300 0 4596300 29125 2152 11031 11333 45493 45493 QVDLIDLVR 9 0 1 Unmodified _QVDLIDLVR_ 0 0 0 Q9UKN8;Q05CN7 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.819 2 535.813856 1069.61316 NaN NaN NaN 0.36988 0.00019819 NaN NaN NaN NaN 110.08 0.46415 110.08 109.87 110.33 0 0 0 0 0.0054623 1 69064 74.301 51.372 1 NaN NaN 0 4337000 0 4337000 29126 2107 11032 11334 45494 45494 QVDLIDLVR 9 0 1 Unmodified _QVDLIDLVR_ 0 0 0 Q9UKN8;Q05CN7 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.8183 2 535.813856 1069.61316 87494.86 0.5687 0.00030472 0.047841 2.5634E-05 0.61654 0.00033035 535.81380803185 540.817925006597 109.45 0.44777 109.45 109.26 109.71 7.6294E-06 75 29 4 0 0 0 0.040397 1 70346 41.876 28.101 1 0.70455 0.7175 0 5263500 2629200 2634300 29127 2107 11032 11334 45495 45495 QVETEEAGVVTTATASVNLK 20 1 0 Unmodified _QVETEEAGVVTTATASVNLK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1024.0304 2 1024.03132 2046.04808 61240.28 0.5167 0.00052912 0.34153 0.00034973 0.85823 0.00087885 1024.53306784683 1028.53991239998 88.914 0.30743 88.914 88.725 89.033 0 81 21 5 0 0 0 2.0941E-17 3 53606 114.64 109.16 1 0.7462 0.78608 0 16408000 10191000 6217300 29128 1405 11033 11335 45496;45497;45498 45497 QVETEEAGVVTTATASVNLK 20 1 0 Unmodified _QVETEEAGVVTTATASVNLK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1024.0333 2 1024.03132 2046.04808 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.935 1 87.935 87.435 88.435 0 0 0 0 9.8226E-16 1 54244 112.5 95.968 1 29129 1405 11033 11335 45499 45499 QVETEEAGVVTTATASVNLK 20 1 0 Unmodified _QVETEEAGVVTTATASVNLK_ 0 0 0 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1024.5344 2 1024.03132 2046.04808 59809 0.31322 0.00032075 0.61567 0.00063047 0.92889 0.00095122 1024.03164354603 1028.03946242729 102.46 0.52453 102.46 102.22 102.75 -7.6294E-06 143 37 6 0 0 0 2.6816E-05 1 58093 48.391 48.391 1 1.1786 0.91655 0 12516000 5965500 6550700 29130 1405 11033 11335 45500 45500 QVFGTHTTQK 10 1 0 Unmodified _QVFGTHTTQK_ 0 0 0 H7BYN4;Q02241;H0YME6;H0YMJ4 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.8059 2 573.798737 1145.58292 79130.7 -0.007327 -4.2042E-06 0.63813 0.00036616 0.6308 0.00036196 573.799649575304 577.806008620652 19.393 0.19884 19.393 19.279 19.478 0 25 6 6 0 0 0 0.0038894 2 5127 62.463 54.243 1 1.5912 1.2615 0 4690400 1842500 2848000 29131 1312 11034 11336 45501;45502 45501 QVFTNAEVYNCR 12 0 1 Unmodified _QVFTNAEVYNCR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.854 2 750.848632 1499.68271 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.429 1 55.429 54.929 55.929 0 0 0 0 5.3289E-11 1 31786 117.01 77.996 1 29132 2103 11035 11337 45503 45503 QVFTNAEVYNCR 12 0 1 Unmodified _QVFTNAEVYNCR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.8517 2 750.848632 1499.68271 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.549 1 55.549 55.049 56.049 0 0 0 0 0.0091892 1 31865 57.785 29.058 1 29133 2103 11035 11337 45504 45504 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.8106 2 584.801477 1167.5884 79137.73 0.41632 0.00024346 0.21203 0.000124 0.62835 0.00036746 584.801496545638 588.808599255676 15.618 0.36374 15.618 15.458 15.822 9.5367E-07 97 25 6 0 0 0 0.025004 1 3174 41.448 27.869 1 0.71073 0.73177 0 10795000 6265400 4529200 29134 34;1513 11036 11338 45505 45505 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 390.2035 3 390.20341 1167.5884 94867.59 0.44759 0.00017465 -0.5298 -0.00020673 -0.082218 -3.2082E-05 390.203215271375 392.874631095571 16.412 0.80715 16.412 16.273 17.081 0 167 33 9 0 0 0 0.0001108 2 3734 67.93 55.314 1 0.83823 0.9061 0 35452000 18829000 16623000 29135 34;1513 11036 11338 45506;45507 45506 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.8088 2 584.801477 1167.5884 78985.45 0.78372 0.00045832 -0.11866 -6.9394E-05 0.66505 0.00038892 584.801362554949 588.808493957162 16.394 0.73224 16.394 16.288 17.021 0 129 30 8 0 0 0 7.8874E-05 2 3739 98.048 62.753 1 0.85176 0.9094 0 32136000 16874000 15263000 29136 34;1513 11036 11338 45508;45509 45509 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 389.8718 3 390.20341 1167.5884 97387.97 0.050324 1.9637E-05 0.99095 0.00038667 1.0413 0.00040631 390.203756434528 392.875014934824 20.414 1.397 20.414 19.933 21.33 0 159 57 5 0 0 0 0.0064928 2 6890 32.999 19.991 1 0.9547 0.96982 0 13697000 8988300 4708600 29137 34;1513 11036 11338 45510;45511 45510 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 390.2038 3 390.20341 1167.5884 NaN NaN NaN -0.29675 -0.00011579 NaN NaN NaN NaN 18.024 2.5192 18.024 17.558 20.078 1.9073E-06 0 0 0 0.00087581 3 5357 57.164 33.134 1 NaN NaN 0 2302600000 2302600000 0 29138 34;1513 11036 11338 45512;45513;45514 45513 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.8018 2 584.801477 1167.5884 NaN NaN NaN 0.8377 0.00048989 NaN NaN NaN NaN 18.079 1.7985 18.079 17.558 19.357 -1.9073E-06 0 0 0 9.8983E-95 2 5419 224.09 150.84 1 NaN NaN 0 2942100000 2942100000 0 29139 34;1513 11036 11338 45515;45516 45516 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 390.2032 3 390.20341 1167.5884 94367.02 -0.18321 -7.1488E-05 0.07565 2.9519E-05 -0.10756 -4.1969E-05 390.203460556093 392.874714519663 15.689 1.11 15.689 15.374 16.484 9.5367E-07 319 83 8 0 0 0 0.0205 1 3161 24.696 17.129 1 0.869 0.89741 0 25018000 14490000 10527000 29140 34;1513 11036 11338 45517 45517 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8022 2 584.801477 1167.5884 NaN NaN NaN 1.1661 0.00068192 NaN NaN NaN NaN 17.96 1.5438 17.96 17.681 19.225 0 0 0 0 1.7301E-151 3 4684 257.4 181.71 1 NaN NaN 0 2485300000 2485300000 0 29141 34;1513 11036 11338 45518;45519;45520 45518 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.8087 2 584.801477 1167.5884 NaN NaN NaN -1.5651 -0.00091526 NaN NaN NaN NaN 17.935 1.4003 17.935 17.709 19.11 -1.9073E-06 0 0 0 1.9937E-112 2 4685 243.82 177.94 1 NaN NaN 0 2131900000 0 2131900000 29142 34;1513 11036 11338 45521;45522 45521 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 390.2032 3 390.20341 1167.5884 NaN NaN NaN -0.13502 -5.2686E-05 NaN NaN NaN NaN 17.977 2.2624 17.977 17.735 19.997 0 0 0 0 4.5329E-31 3 4688 132.47 92.118 1 NaN NaN 0 1816100000 1816100000 0 29143 34;1513 11036 11338 45523;45524;45525 45523 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.8015 2 584.801477 1167.5884 79236.91 0.38404 0.00022459 0.14192 8.2995E-05 0.52596 0.00030758 584.801441989227 588.808666469374 16.081 0.28213 16.081 15.948 16.23 0 146 27 7 0 0 0 0.0062641 1 3026 54.722 39.572 1 0.87159 0.6906 0 3017900 1501300 1516600 29144 34;1513 11036 11338 45526 45526 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.8022 2 584.801477 1167.5884 78363.84 0.3061 0.00017901 0.36798 0.0002152 0.67408 0.0003942 584.801692143319 588.808716236875 16.854 0.62127 16.854 16.733 17.355 0 188 38 9 0 0 0 0.0038081 1 3450 59.153 40.175 1 0.8761 0.69981 0 6974600 3743400 3231200 29145 34;1513 11036 11338 45527 45527 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 390.2034 3 390.20341 1167.5884 93459.85 0.014705 5.7379E-06 -0.042881 -1.6732E-05 -0.028176 -1.0994E-05 390.203445651312 392.874717391882 16.858 0.63198 16.858 16.701 17.333 0 206 39 10 0 0 0 0.0205 1 3461 24.696 17.129 1 0.82172 0.65516 0 9596900 4981500 4615400 29146 34;1513 11036 11338 45528 45528 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 390.2035 3 390.20341 1167.5884 NaN NaN NaN -0.56757 -0.00022147 NaN NaN NaN NaN 18.971 2.1361 18.971 18.567 20.703 0 0 0 0 6.6668E-23 2 4772 130.56 98.242 1 NaN NaN 0 726770000 726770000 0 29147 34;1513 11036 11338 45529;45530 45529 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.8016 2 584.801477 1167.5884 NaN NaN NaN 0.67041 0.00039206 NaN NaN NaN NaN 18.971 2.5104 18.971 18.592 21.102 0 0 0 0 1.3871E-16 1 5176 140.78 90.173 1 NaN NaN 0 741350000 741350000 0 29148 34;1513 11036 11338 45531 45531 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.8097 2 584.801477 1167.5884 NaN NaN NaN -1.8716 -0.0010945 NaN NaN NaN NaN 18.97 2.1418 18.97 18.745 20.886 0 0 0 0 0.042767 1 5813 46.406 35.043 1 NaN NaN 0 636130000 0 636130000 29149 34;1513 11036 11338 45532 45532 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.8013 2 584.801477 1167.5884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.676 1 18.676 18.176 19.176 0 0 0 0 0.019474 1 4634 53.756 4.3979 1 29150 34;1513 11036 11338 45533 45533 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.8089 2 584.801477 1167.5884 NaN NaN NaN -1.5418 -0.00090167 NaN NaN NaN NaN 18.876 1.3983 18.876 18.724 20.122 0 0 0 0 7.7876E-80 3 4258 218.11 146.61 1 NaN NaN 0 414050000 0 414050000 29151 34;1513 11036 11338 45534;45535;45536 45535 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.8019 2 584.801477 1167.5884 NaN NaN NaN 0.65577 0.0003835 NaN NaN NaN NaN 18.876 1.4718 18.876 18.681 20.152 1.9073E-06 0 0 0 7.5996E-112 2 4259 241.63 159.39 1 NaN NaN 0 480670000 480670000 0 29152 34;1513 11036 11338 45537;45538 45537 QVLDNLTMEK 10 1 0 Oxidation (M) _QVLDNLTM(ox)EK_ QVLDNLTM(1)EK QVLDNLTM(48.03)EK 0 1 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.8051 2 603.805371 1205.59619 NaN NaN NaN -0.13124 -7.9246E-05 NaN NaN NaN NaN 51.736 1.1263 51.736 51.017 52.143 0 0 0 0 0.01408 1 29041 48.028 35.5 1 NaN NaN 0 146310000 146310000 0 + 29153 1165 11037 11339 45539 45539 880 QVLDNLTMEK 10 1 0 Oxidation (M) _QVLDNLTM(ox)EK_ QVLDNLTM(1)EK QVLDNLTM(62.82)EK 0 1 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.8057 2 603.805371 1205.59619 NaN NaN NaN 0.027609 1.667E-05 NaN NaN NaN NaN 61.035 1.3268 61.035 60.637 61.963 0 0 0 0 0.0032684 1 30480 62.823 41.921 1 NaN NaN 0 13488000 13488000 0 + 29154 1165 11037 11339 45540 45540 880 QVLVAPGNAGTACSEK 16 1 0 Unmodified _QVLVAPGNAGTACSEK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 805.4078 2 801.401229 1600.78791 69819.52 0.33075 0.00026506 0.12792 0.00010252 0.45867 0.00036758 801.401491743611 805.408695832925 52.113 0.52322 52.113 51.857 52.38 -3.8147E-06 154 39 6 0 0 0 0.0057582 2 25088 35.737 19.483 1 1.5165 1.228 0 2589900 1173700 1416200 29155 1507 11038 11340 45541;45542 45541 QVPFNEVR 8 0 1 Unmodified _QVPFNEVR_ 0 0 0 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;C9JAJ4 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7641 2 494.764166 987.513779 88527.64 0.27334 0.00013524 -0.025134 -1.2435E-05 0.24821 0.0001228 494.764361760311 499.768019842306 46.481 0.52171 46.481 46.268 46.79 -3.8147E-06 121 41 5 0 0 0 0.031577 2 25677 58.782 33.838 1 1.0509 1.1766 0 44999000 17838000 27161000 29156 531 11039 11341 45543;45544 45544 QVPLNPDLNQTK 12 1 0 Unmodified _QVPLNPDLNQTK_ 0 0 0 J3QQW9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.8771 2 683.869891 1365.72523 NaN NaN NaN -0.15076 -0.0001031 NaN NaN NaN NaN 57.859 0.55858 57.859 57.558 58.116 0 0 0 0 0.036522 1 32612 45.161 23.697 1 NaN NaN 0 7405900 0 7405900 29157 1336 11040 11342 45545 45545 QVPLNPDLNQTK 12 1 0 Unmodified _QVPLNPDLNQTK_ 0 0 0 J3QQW9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.8696 2 683.869891 1365.72523 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.8 1 57.8 57.3 58.3 0 0 0 0 0.0081238 1 32706 59.426 28.739 1 29158 1336 11040 11342 45546 45546 QVPLNPDLNQTK 12 1 0 Unmodified _QVPLNPDLNQTK_ 0 0 0 J3QQW9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.8773 2 683.869891 1365.72523 73802.16 0.57809 0.00039534 -0.56584 -0.00038696 0.012256 8.3815E-06 684.369306928665 687.877086026795 56.962 0.77332 56.962 56.713 57.487 0 206 59 6 0 0 0 0.0003692 2 32879 72.006 65.701 1 0.86967 0.91719 0 23740000 13956000 9784900 29159 1336 11040 11342 45547;45548 45547 QVPLNPDLNQTK 12 1 0 Unmodified _QVPLNPDLNQTK_ 0 0 0 J3QQW9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.8779 2 683.869891 1365.72523 NaN NaN NaN 0.0066501 4.5478E-06 NaN NaN NaN NaN 66.956 0.65228 66.956 66.634 67.286 7.6294E-06 0 0 0 0.052255 1 34664 41.54 27.77 1 NaN NaN 0 5366200 0 5366200 29160 1336 11040 11342 45549 45549 QVPVSTTVVSTSQAGK 16 1 0 Unmodified _QVPVSTTVVSTSQAGK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 798.9379 2 794.930677 1587.8468 NaN NaN NaN -0.32427 -0.00025777 NaN NaN NaN NaN 63.762 0.30637 63.762 63.564 63.87 0 0 0 0 0.050922 1 32049 34.386 19.12 1 NaN NaN 0 855740 0 855740 29161 135 11041 11343 45550 45550 QVQQLLGK 8 1 0 Unmodified _QVQQLLGK_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7;B4DY21 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.2774 2 457.276909 912.539266 NaN NaN NaN -0.13392 -6.1241E-05 NaN NaN NaN NaN 39.143 0.46788 39.143 38.803 39.271 0 0 0 0 0.053018 1 20136 48.756 29.499 1 NaN NaN 0 7074200 7074200 0 29162 2139 11042 11344 45551 45551 QVQSLTCEVDALK 13 1 0 Unmodified _QVQSLTCEVDALK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.8881 2 745.879598 1489.74464 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.708 1 80.708 80.208 81.208 0 0 0 0 0.00031334 1 48016 88.596 53.372 1 29163 1457 11043 11345 45552 45552 QVQSLTCEVDALK 13 1 0 Unmodified _QVQSLTCEVDALK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.8799 2 745.879598 1489.74464 68424.9 0.77784 0.00058018 -1.2707 -0.00094782 -0.49289 -0.00036764 745.880166918269 749.88684363448 79.921 0.79808 79.921 79.644 80.442 0 255 64 6 0 0 0 4.4973E-14 2 48560 136.02 136.02 1 1.4314 1.6126 0 59379000 25778000 33601000 29164 1457 11043 11345 45553;45554 45554 QVQSLTCEVDALK 13 1 0 Unmodified _QVQSLTCEVDALK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 749.8868 2 745.879598 1489.74464 70063.62 0.77949 0.00058141 -0.15896 -0.00011856 0.62054 0.00046285 745.879414460271 749.886709205412 93.307 0.85222 93.307 92.955 93.807 0 229 54 8 0 0 0 0.0032495 2 51940 50.452 50.452 1 3.2873 2.6687 0 27114000 6809000 20305000 29165 1457 11043 11345 45555;45556 45555 QVQSLTCEVDALK 13 1 0 Unmodified _QVQSLTCEVDALK_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 749.8874 2 745.879598 1489.74464 70083.66 0.42936 0.00032025 -0.23039 -0.00017185 0.19897 0.0001484 745.87938427532 749.886739821963 93.188 0.76035 93.188 92.913 93.673 0 278 44 10 0 0 0 0.00027898 2 51086 66.663 60.423 1 3.1854 2.5849 0 24657000 4861200 19796000 29166 1457 11043 11345 45557;45558 45557 QVQVALETAQR 11 0 1 Unmodified _QVQVALETAQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.848 2 621.843676 1241.6728 77851.55 0.43216 0.00026874 -2.3333 -0.001451 -1.9012 -0.0011822 621.843538782989 626.847454095669 54.958 0.57923 54.958 54.756 55.336 0 130 41 5 0 0 0 0.0046969 1 26883 57.55 35.464 1 2.8426 2.4906 0 1842900 513370 1329500 29167 1754 11044 11346 45559 45559 QVSDDLTER 9 0 1 Unmodified _QVSDDLTER_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.7612 2 531.756735 1061.49892 NaN NaN NaN 0.085958 4.5709E-05 NaN NaN NaN NaN 27.562 0.69443 27.562 27.162 27.857 0 0 0 0 5.6389E-05 1 12684 103.83 44.916 1 NaN NaN 0 25091000 0 25091000 29168 730 11045 11347 45560 45560 QVSDDLTER 9 0 1 Unmodified _QVSDDLTER_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.7571 2 531.756735 1061.49892 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.519 1 27.519 27.019 28.019 0 0 0 0 0.003002 1 12724 88.819 29.902 1 29169 730 11045 11347 45561 45561 QVSDDLTER 9 0 1 Unmodified _QVSDDLTER_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.7615 2 531.756735 1061.49892 NaN NaN NaN 0.001207 6.4185E-07 NaN NaN NaN NaN 27.067 0.61299 27.067 26.767 27.38 0 0 0 0 5.7462E-05 1 12364 103.74 36.707 1 NaN NaN 0 35910000 0 35910000 29170 730 11045 11347 45562 45562 QVSDDLTER 9 0 1 Unmodified _QVSDDLTER_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.7609 2 531.756735 1061.49892 NaN NaN NaN -0.19395 -0.00010313 NaN NaN NaN NaN 31.208 0.54722 31.208 30.902 31.449 1.9073E-06 0 0 0 0.031882 1 13100 52.867 14.448 1 NaN NaN 0 5584300 0 5584300 29171 730 11045 11347 45563 45563 QVSDLISVLR 10 0 1 Unmodified _QVSDLISVLR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.3367 2 565.332413 1128.65027 80542.08 0.76196 0.00043076 0.31896 0.00018032 1.0809 0.00061108 565.333174419609 570.336516755064 104.75 0.58661 104.75 104.44 105.03 0 171 49 4 0 0 0 0.0067028 1 64737 58.433 24.181 1 1.4657 1.5331 0 12971000 5265200 7705500 29172 1009 11046 11348 45564 45564 QVSDLISVLR 10 0 1 Unmodified _QVSDLISVLR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.3369 2 565.332413 1128.65027 81247.48 0.60298 0.00034088 0.11715 6.6231E-05 0.72013 0.00040711 565.332906187141 570.336390010209 103.96 0.66057 103.96 103.66 104.32 -7.6294E-06 210 57 6 0 0 0 0.020901 1 65857 46.462 20.903 1 1.3688 1.355 0 12311000 5164300 7146500 29173 1009 11046 11348 45565 45565 QVSSHIQVLAR 11 0 1 Unmodified _QVSSHIQVLAR_ 0 0 0 H0YE88;P28347;H0YEJ9;H0YGS2;A0A0A0MRF3;Q96G15;Q53GI4;Q71U35;A0A024QZE2;A0A024QZD8;Q15561;Q99594;Q15562;A0A0S2Z4F2;H0YG62;A0A0S2Z4E5;D3DUQ6 H0YE88 H0YE88 TEAD1;TEAD4;TEAD3;TEAD2 Transcriptional enhancer factor TEF-1;Transcriptional enhancer factor TEF-3;Transcriptional enhancer factor TEF-5;Transcriptional enhancer factor TEF-4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 416.5746 3 413.238566 1236.69387 91723.95 -0.19448 -8.0366E-05 0.22772 9.4101E-05 0.033237 1.3735E-05 413.238248093521 416.574591285672 45.106 0.57174 45.106 44.864 45.435 3.8147E-06 204 42 7 0 0 0 0.02464 1 21474 23.676 12.463 1 1.0487 0.88968 0 9258800 4568000 4690900 29174 1291 11047 11349 45566 45566 QVSSHIQVLAR 11 0 1 Unmodified _QVSSHIQVLAR_ 0 0 0 H0YE88;P28347;H0YEJ9;H0YGS2;A0A0A0MRF3;Q96G15;Q53GI4;Q71U35;A0A024QZE2;A0A024QZD8;Q15561;Q99594;Q15562;A0A0S2Z4F2;H0YG62;A0A0S2Z4E5;D3DUQ6 H0YE88 H0YE88 TEAD1;TEAD4;TEAD3;TEAD2 Transcriptional enhancer factor TEF-1;Transcriptional enhancer factor TEF-3;Transcriptional enhancer factor TEF-5;Transcriptional enhancer factor TEF-4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 416.5745 3 413.238566 1236.69387 93197.8 0.01601 6.6161E-06 -0.21611 -8.9304E-05 -0.2001 -8.2688E-05 413.238389150215 416.574558846761 44.871 0.64375 44.871 44.522 45.166 0 200 37 8 0 0 0 0.004674 1 20797 37.426 22.55 1 1.0375 0.8639 0 7080800 3466500 3614300 29175 1291 11047 11349 45567 45567 QVTITGSAASISLAQYLINAR 21 0 1 Unmodified _QVTITGSAASISLAQYLINAR_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1089.6045 2 1089.09987 2176.18518 61458.38 0.59659 0.00064975 0.30472 0.00033187 0.90131 0.00098161 1089.60223432551 1094.60560560749 126.91 0.47946 126.91 126.76 127.24 0 96 27 7 0 0 0 3.8164E-09 2 82601 85.837 85.837 1 1.8589 1.8668 0 7892400 3305700 4586700 29176 1759 11048 11350 45568;45569 45568 QVTITGSAASISLAQYLINAR 21 0 1 Unmodified _QVTITGSAASISLAQYLINAR_ 0 0 0 Q53SS8;Q15365 Q53SS8 Q53SS8 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1089.1034 2 1089.09987 2176.18518 61304.11 0.52273 0.00056931 0.47577 0.00051816 0.9985 0.0010875 1089.10038571601 1094.60589722906 126.56 0.39297 126.56 126.4 126.79 0 98 23 7 0 0 0 3.0029E-08 2 84428 74.769 74.769 1 1.6147 1.6061 0 8266100 3137600 5128500 29177 1759 11048 11350 45570;45571 45571 QVTITGSAASISLAQYLINVR 21 0 1 Unmodified _QVTITGSAASISLAQYLINVR_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;Q15366;H3BSS4 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1108.6218 2 1103.11552 2204.21648 NaN NaN NaN 0.5033 0.0005552 NaN NaN NaN NaN 130.49 0.26974 130.49 130.4 130.67 0 0 0 0 0.010314 1 85095 37.013 30.131 1 NaN NaN 0 2555100 0 2555100 29178 1263;1760 11049 11351 45572 45572 QVTITGSAASISLAQYLINVR 21 0 1 Unmodified _QVTITGSAASISLAQYLINVR_ 0 0 0 H3BRU6;F8VZX2;B4DRD7;Q15366;H3BSS4 H3BRU6;Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1108.6205 2 1103.11552 2204.21648 NaN NaN NaN 0.34764 0.00038349 NaN NaN NaN NaN 130.02 0.3577 130.02 129.89 130.25 0 0 0 0 0.01375 1 86895 35.037 29.86 1 NaN NaN 0 3427900 0 3427900 29179 1263;1760 11049 11351 45573 45573 QVVEEPSPQLPADR 14 0 1 Unmodified _QVVEEPSPQLPADR_ 0 0 0 C7DUW4;Q6FI23;Q6FHG1;Q53EZ9;P46734;J3KRV4 C7DUW4 C7DUW4 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.9079 2 782.901919 1563.78929 NaN NaN NaN -0.12022 -9.4118E-05 NaN NaN NaN NaN 61.94 0.29099 61.94 61.754 62.045 -3.8147E-06 0 0 0 6.7747E-10 1 36298 113.63 82.135 1 NaN NaN 0 3115000 0 3115000 29180 1124 11050 11352 45574 45574 QVVNIPSFIVR 11 0 1 Unmodified _QVVNIPSFIVR_ 0 0 0 A0A024R4M0;P46781;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.3821 2 636.377155 1270.73976 76380.95 0.7699 0.00048994 0.054866 3.4915E-05 0.82476 0.00052486 636.377211149508 641.381232162304 111.11 0.77934 111.11 110.85 111.63 0 327 53 10 0 0 0 9.4806E-06 2 69751 109.02 85.667 1 0.88428 1.043 0 244900000 130790000 114110000 29181 157 11051 11353 45575;45576 45575 QVVNIPSFIVR 11 0 1 Unmodified _QVVNIPSFIVR_ 0 0 0 A0A024R4M0;P46781;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3777 2 636.377155 1270.73976 76396.67 0.78574 0.00050003 0.041286 2.6273E-05 0.82703 0.0005263 636.377192114621 641.381256974617 110.45 0.67834 110.45 110.18 110.86 0 332 49 10 0 0 0 2.866E-05 2 70992 101.54 84.075 1 0.89859 1.0427 0 329200000 177260000 151940000 29182 157 11051 11353 45577;45578 45578 QVVNIPSFIVR 11 0 1 Unmodified _QVVNIPSFIVR_ 0 0 0 A0A024R4M0;P46781;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.3784 2 636.377155 1270.73976 75721.54 0.82599 0.00052564 0.047084 2.9963E-05 0.87308 0.00055561 636.377243417808 641.381249177318 122.49 0.97866 122.49 122.23 123.21 -7.6294E-06 291 48 10 0 0 0 7.3374E-08 1 72960 113.71 100.25 1 0.83186 0.7196 0 121910000 66554000 55357000 29183 157 11051 11353 45579 45579 QVVNIPSFIVR 11 0 1 Unmodified _QVVNIPSFIVR_ 0 0 0 A0A024R4M0;P46781;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.3782 2 636.377155 1270.73976 76312.61 0.91796 0.00058417 0.014469 9.2081E-06 0.93243 0.00059338 636.377162699361 641.381208356442 122.29 0.83388 122.29 122.01 122.84 7.6294E-06 280 42 10 0 0 0 3.5611E-08 1 71897 119.75 99.913 1 0.78855 0.68866 0 172840000 97554000 75281000 29184 157 11051 11353 45580 45580 QVVQGLLSETYLEAHR 16 0 1 Unmodified _QVVQGLLSETYLEAHR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.6657 3 614.99513 1841.96356 NaN NaN NaN -0.41789 -0.000257 NaN NaN NaN NaN 92.724 0.27338 92.724 92.559 92.832 -7.6294E-06 0 0 0 0.0042651 1 56247 43.454 26.376 1 NaN NaN 0 7673600 0 7673600 29185 560 11052 11354 45581 45581 QVVQGLLSETYLEAHR 16 0 1 Unmodified _QVVQGLLSETYLEAHR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.9951 3 614.99513 1841.96356 78362.26 0.72173 0.00044386 1.0874 0.00066874 1.8091 0.0011126 615.329864211258 618.666521604464 91.768 0.47071 91.768 91.579 92.05 0 98 41 4 0 0 0 0.0029359 1 56850 33.872 33.872 1 0.72594 0.7144 0 14450000 6372700 8077500 29186 560 11052 11354 45582 45582 QVVQGLLSETYLEAHR 16 0 1 Unmodified _QVVQGLLSETYLEAHR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3326 3 614.99513 1841.96356 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.752 1 91.752 91.252 92.252 0 0 0 0 0.002498 1 56818 62.646 55.606 1 29187 560 11052 11354 45583 45583 QVVQGLLSETYLEAHR 16 0 1 Unmodified _QVVQGLLSETYLEAHR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.3326 3 614.99513 1841.96356 75333.03 0.47376 0.00029136 0.51233 0.00031508 0.98609 0.00060644 615.33001804375 618.332152917847 106.1 0.46463 106.1 105.89 106.36 0 112 21 8 0 0 0 0.051521 2 60604 15.121 15.121 1 0.80672 0.68678 0 5436100 2882900 2553200 29188 560 11052 11354 45584;45585 45584 QVVQGLLSETYLEAHR 16 0 1 Unmodified _QVVQGLLSETYLEAHR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.3317 3 614.99513 1841.96356 77924.77 0.54209 0.00033338 0.24724 0.00015205 0.78933 0.00048543 615.330275092452 618.331736767415 105.82 0.66957 105.82 105.62 106.29 0 172 38 9 0 0 0 0.03545 2 59515 18.579 18.579 1 0.77099 0.63966 0 5234400 2775100 2459300 29189 560 11052 11354 45586;45587 45586 QVVSAVTALVEAAER 15 0 1 Unmodified _QVVSAVTALVEAAER_ 0 0 0 P58107 P58107 P58107 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.9319 2 771.927937 1541.84132 70866.55 0.87498 0.00067542 0.99323 0.0007667 1.8682 0.0014421 771.928236372608 776.932401652387 117.94 0.47207 117.94 117.72 118.2 0 73 27 4 0 0 0 2.4296E-06 2 75583 117.23 117.23 1 1.0924 1.1211 0 6485500 2909400 3576100 29190 1622 11053 11355 45588;45589 45588 QVVSAVTALVEAAER 15 0 1 Unmodified _QVVSAVTALVEAAER_ 0 0 0 P58107 P58107 P58107 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.9319 2 771.927937 1541.84132 72017.33 0.61752 0.00047668 0.45945 0.00035467 1.077 0.00083134 772.43077019209 776.932189190859 117.36 0.53625 117.36 117.19 117.73 0 89 31 5 0 0 0 0.00022361 2 76925 88.021 73.863 1 1.5975 1.5699 0 13571000 6815800 6755300 29191 1622 11053 11355 45590;45591 45590 QVVTGTVLTR 10 0 1 Unmodified _QVVTGTVLTR_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.3242 2 537.319306 1072.62406 83057.16 0.75559 0.00040599 -0.24453 -0.00013139 0.51106 0.0002746 537.319342284954 542.323185399896 50.015 0.44231 50.015 49.733 50.175 0 117 38 4 0 0 0 0.028768 1 27514 43.297 32.539 1 1.2829 1.3123 0 35470000 15786000 19684000 29192 1945 11054 11356 45592 45592 QVVTGTVLTR 10 0 1 Unmodified _QVVTGTVLTR_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.324 2 537.319306 1072.62406 84636.47 0.68084 0.00036583 -0.71327 -0.00038326 -0.032432 -1.7426E-05 537.319040934741 542.323080909656 48.777 0.37989 48.777 48.518 48.898 0 132 30 5 0 0 0 0.0096548 1 27230 54.419 49.953 1 1.4581 1.5748 0 26601000 12774000 13827000 29193 1945 11054 11356 45593 45593 QVVTGTVLTR 10 0 1 Unmodified _QVVTGTVLTR_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.3239 2 537.319306 1072.62406 83623.95 0.63891 0.0003433 -0.14242 -7.6523E-05 0.49649 0.00026678 537.319227054357 542.323266100194 57.262 0.63204 57.262 57.01 57.642 0 201 45 7 0 0 0 0.023048 1 28911 45.598 41.395 1 2.3796 2.0219 0 9154200 2330100 6824100 29194 1945 11054 11356 45594 45594 QVYIPTYTK 9 1 0 Unmodified _QVYIPTYTK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.8026 2 556.802957 1111.59136 80522.47 0.33977 0.00018918 0.13799 7.6831E-05 0.47775 0.00026601 556.803029433786 560.810591355756 64.877 0.65923 64.877 64.542 65.201 0 224 58 6 0 0 0 0.00064829 2 37297 96.311 80.017 1 0.75612 0.74358 0 20000000 11923000 8077000 29195 168 11055 11357 45595;45596 45596 QVYIPTYTK 9 1 0 Unmodified _QVYIPTYTK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.8027 2 556.802957 1111.59136 78914.95 0.48072 0.00026767 0.43448 0.00024192 0.9152 0.00050959 556.803003245322 560.810700497751 63.687 0.59517 63.687 63.411 64.006 0 212 53 6 0 0 0 0.00044654 2 37445 99.136 78.477 1 0.73806 0.80103 0 22357000 12535000 9821400 29196 168 11055 11357 45597;45598 45598 QVYIPTYTK 9 1 0 Unmodified _QVYIPTYTK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.8102 2 556.802957 1111.59136 80035.88 0.58219 0.00032416 0.34752 0.0001935 0.92971 0.00051767 556.803045857283 560.810044104805 74.726 0.8591 74.726 74.299 75.158 0 243 61 6 0 0 0 0.052105 1 39566 37.191 31.881 1 1.849 1.482 0 7430900 2590900 4840000 29197 168 11055 11357 45599 45599 QVYIPTYTK 9 1 0 Unmodified _QVYIPTYTK_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.8029 2 556.802957 1111.59136 80904.52 0.48389 0.00026943 0.22731 0.00012657 0.7112 0.000396 556.802904971527 560.81003165251 75.047 0.91817 75.047 74.592 75.511 0 245 62 6 0 0 0 0.028936 1 39010 46.462 40.714 1 1.8527 1.5147 0 5553500 1975400 3578100 29198 168 11055 11357 45600 45600 QWGWTQGR 8 0 1 Unmodified _QWGWTQGR_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.7462 2 509.746308 1017.47806 NaN NaN NaN -0.19147 -9.7603E-05 NaN NaN NaN NaN 52.059 0.7537 52.059 51.855 52.608 0 0 0 0 0.028018 1 28849 60.478 45.696 1 NaN NaN 0 42814000 42814000 0 29199 106 11056 11358 45601 45601 QWGWTQGR 8 0 1 Unmodified _QWGWTQGR_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.7514 2 509.746308 1017.47806 74602.95 0.45444 0.00023165 -0.048064 -2.45E-05 0.40638 0.00020715 509.74597180895 514.751089941672 50.681 0.69911 50.681 50.49 51.189 3.8147E-06 159 58 5 0 0 0 0.006912 1 28592 85.212 85.212 1 0.45444 0.52729 0 58569000 39966000 18603000 29200 106 11056 11358 45602 45602 QWGWTQGR 8 0 1 Unmodified _QWGWTQGR_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.7461 2 509.746308 1017.47806 83439.83 0.28969 0.00014767 -0.3135 -0.0001598 -0.023812 -1.2138E-05 509.746260497715 514.75018511915 59.685 0.99838 59.685 59.323 60.322 -3.8147E-06 384 69 8 0 0 0 0.034697 1 30372 49.325 49.325 1 0.74955 0.62402 0 22163000 12897000 9265200 29201 106 11056 11358 45603 45603 QWYESHYALPLGR 13 0 1 Unmodified _QWYESHYALPLGR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.2744 3 540.603685 1618.78923 NaN NaN NaN 0.41943 0.00022674 NaN NaN NaN NaN 85.332 1.0057 85.332 84.994 86 0 0 0 0 0.015594 1 51224 39.878 37.219 1 NaN NaN 0 11339000 0 11339000 29202 1635 11057 11359 45604 45604 QWYESHYALPLGR 13 0 1 Unmodified _QWYESHYALPLGR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.2741 3 540.603685 1618.78923 82525.75 0.94779 0.00051238 0.53961 0.00029172 1.4874 0.00080409 540.938092536363 543.939715796401 83.919 0.73637 83.919 83.617 84.353 0 242 61 7 0 0 0 0.0030336 1 51420 39.581 39.581 1 0.65496 0.7525 0 52726000 32686000 20040000 29203 1635 11057 11359 45605 45605 QWYESHYALPLGR 13 0 1 Unmodified _QWYESHYALPLGR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.4035 2 810.401889 1618.78923 NaN NaN NaN 2.1923 0.0017766 NaN NaN NaN NaN 83.986 0.42056 83.986 83.836 84.257 0 0 0 0 0.0074552 1 51558 54.471 36.998 1 NaN NaN 0 7666700 7666700 0 29204 1635 11057 11359 45606 45606 QWYESHYALPLGR 13 0 1 Unmodified _QWYESHYALPLGR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.4064 2 810.401889 1618.78923 NaN NaN NaN -1.5151 -0.0012279 NaN NaN NaN NaN 84.119 0.28438 84.119 83.997 84.282 0 0 0 0 0.01567 1 51604 50.194 37.103 1 NaN NaN 0 4558500 0 4558500 29205 1635 11057 11359 45607 45607 QWYESHYALPLGR 13 0 1 Unmodified _QWYESHYALPLGR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.6042 3 540.603685 1618.78923 NaN NaN NaN -0.070022 -3.7854E-05 NaN NaN NaN NaN 84.076 0.53084 84.076 84.038 84.569 0 0 0 0 0.028159 1 51775 28.632 24.461 1 NaN NaN 0 17651000 17651000 0 29206 1635 11057 11359 45608 45608 QWYESHYALPLGR 13 0 1 Unmodified _QWYESHYALPLGR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.6041 3 540.603685 1618.78923 80295.43 0.88926 0.00048074 -0.21932 -0.00011857 0.66994 0.00036217 540.603565824335 543.939604175703 96.968 1.0295 96.968 96.631 97.66 0 371 53 10 0 0 0 0.0024408 2 54635 44.511 44.511 1 0.88151 0.73958 0 25866000 13582000 12284000 29207 1635 11057 11359 45609;45610 45610 QWYESHYALPLGR 13 0 1 Unmodified _QWYESHYALPLGR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 815.4065 2 810.401889 1618.78923 66019.94 0.88447 0.00071677 -0.59381 -0.00048123 0.29065 0.00023555 810.4022309133 815.405589395971 96.935 0.85315 96.936 96.707 97.56 7.6294E-06 237 43 9 0 0 0 0.001556 2 54518 57.348 57.348 1 0.94138 0.80752 0 8433700 4107700 4326000 29208 1635 11057 11359 45611;45612 45611 QWYESHYALPLGR 13 0 1 Unmodified _QWYESHYALPLGR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.6031 3 540.603685 1618.78923 80811.38 0.40101 0.00021679 0.016899 9.1357E-06 0.41791 0.00022592 540.60369347245 543.939737267756 96.723 1.179 96.723 96.344 97.523 7.6294E-06 391 58 10 0 0 0 0.0043381 3 53445 43.382 43.382 1 0.91344 0.79025 0 23239000 11712000 11527000 29209 1635 11057 11359 45613;45614;45615 45614 QWYESHYALPLGR 13 0 1 Unmodified _QWYESHYALPLGR_ 0 0 0 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 815.4063 2 810.401889 1618.78923 65717.19 0.4448 0.00036046 -0.11109 -9.0026E-05 0.33371 0.00027044 810.90316817498 815.405844391115 96.67 1.0355 96.67 96.449 97.484 0 259 50 7 0 0 0 0.00016902 2 53413 72.006 72.006 1 0.90172 0.74313 0 8364200 4164200 4200000 29210 1635 11057 11359 45616;45617 45616 QYHVQFFGDAPER 13 0 1 Unmodified _QYHVQFFGDAPER_ 0 0 0 O96028;Q05CW4;D6R9V2 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.2556 3 531.919673 1592.73719 81992.55 0.43156 0.00022955 0.14532 7.7299E-05 0.57688 0.00030685 531.919753172341 535.255806757977 79.143 0.67876 79.143 78.78 79.458 0 188 38 6 0 0 0 0.0037395 1 42606 39.746 36.198 1 1.5988 1.3371 0 3826000 1597100 2228900 29211 1435 11058 11360 45618 45618 QYIGPPSAAAIFK 13 1 0 Unmodified _QYIGPPSAAAIFK_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.8831 2 681.874445 1361.73434 75780.97 0.63744 0.00043465 0.41601 0.00028366 1.0534 0.00071832 681.874694727161 685.881653306832 100.59 0.62851 100.59 100.34 100.97 0 155 45 5 0 0 0 0.0015988 1 61641 57.174 57.174 1 1.8311 1.8609 0 13775000 4701800 9073500 29212 1763 11059 11361 45619 45619 QYIGPPSAAAIFK 13 1 0 Unmodified _QYIGPPSAAAIFK_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.8832 2 681.874445 1361.73434 75862.84 0.94908 0.00064715 0.0069116 4.7128E-06 0.95599 0.00065187 681.874387214149 685.881592761002 113.15 0.446 113.15 112.91 113.35 -7.6294E-06 73 21 6 0 0 0 0.0048366 1 65826 48.004 48.004 1 1.4507 1.1275 0 3623700 1726300 1897400 29213 1763 11059 11361 45620 45620 QYIGPPSAAAIFK 13 1 0 Unmodified _QYIGPPSAAAIFK_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.8818 2 681.874445 1361.73434 76014.77 0.69018 0.00047062 0.37745 0.00025737 1.0676 0.00072799 681.874614103081 685.881626494169 112.93 0.4104 112.93 112.73 113.14 7.6294E-06 98 19 8 0 0 0 0.011292 1 64794 40.715 40.715 1 1.3699 1.0667 0 3519700 1625400 1894400 29214 1763 11059 11361 45621 45621 QYNQTFETHNSTTPLQER 18 0 1 Unmodified _QYNQTFETHNSTTPLQER_ 0 0 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.3489 3 732.010168 2193.00867 71331.09 0.60971 0.00044631 0.22786 0.0001668 0.83757 0.00061311 732.010178712345 735.680838052302 53.498 0.36047 53.498 53.302 53.663 0 123 24 8 0 0 0 0.0071986 2 26548 23.726 23.726 1 1.0406 0.87052 0 3875800 2021600 1854200 29215 1970 11060 11362 45622;45623 45622 QYNQTFETHNSTTPLQER 18 0 1 Unmodified _QYNQTFETHNSTTPLQER_ 0 0 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.0107 3 732.010168 2193.00867 70995.3 0.48694 0.00035645 0.1227 8.982E-05 0.60964 0.00044627 732.344784103174 735.680350550981 53.979 0.41358 53.979 53.737 54.151 -3.8147E-06 129 26 8 0 0 0 0.042276 2 26252 15.162 15.162 1 0.90616 0.80143 0 2426000 1220600 1205500 29216 1970 11060 11362 45624;45625 45625 QYQAGQTVTCFLK 13 1 0 Unmodified _QYQAGQTVTCFLK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.3921 2 772.382308 1542.75006 69130.84 0.86259 0.00066625 -0.79191 -0.00061166 0.070675 5.4588E-05 772.382077267049 776.390075984469 94.302 0.70413 94.302 94.047 94.751 0 182 44 7 0 0 0 0.0035417 1 51819 49.466 46.953 1 1.4694 1.1495 0 3719100 1444600 2274500 29217 1741 11061 11363 45626 45626 QYQIDAAIVR 10 0 1 Unmodified _QYQIDAAIVR_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.8254 2 588.822212 1175.62987 84999.33 0.74833 0.00044063 0.28521 0.00016794 1.0335 0.00060857 588.822676096741 593.825921683017 73.949 0.41566 73.949 73.739 74.155 0 100 39 4 0 0 0 0.00095588 1 43378 78.516 48.349 1 0.79424 0.80135 0 9521600 5715200 3806400 29218 1718 11062 11364 45627 45627 QYQIDAAIVR 10 0 1 Unmodified _QYQIDAAIVR_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.8262 2 588.822212 1175.62987 79228.28 0.49182 0.00028959 0.065382 3.8499E-05 0.5572 0.00032809 588.822213282668 593.826323255413 84.612 0.60223 84.612 84.318 84.92 0 213 44 6 0 0 0 0.0027842 1 46121 67.507 41.123 1 0.90946 0.78264 0 7137800 3784400 3353400 29219 1718 11062 11364 45628 45628 QYQIDAAIVR 10 0 1 Unmodified _QYQIDAAIVR_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.8272 2 588.822212 1175.62987 78455.63 0.65175 0.00038376 0.26195 0.00015424 0.91369 0.000538 588.822248720857 593.82645458498 84.737 0.78871 84.737 84.372 85.161 7.6294E-06 222 55 6 0 0 0 0.0017496 2 45377 72.23 49.449 1 0.86063 0.71556 0 7510000 3915200 3594900 29220 1718 11062 11364 45629;45630 45629 QYYVEAFGDPSER 13 0 1 Unmodified _QYYVEAFGDPSER_ 0 0 0 B2RWP5;Q96L73;Q96MN8;A4QPE5;D6RBV9;D6RA58 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 785.8564 2 780.851895 1559.68924 70790.29 0.86273 0.00067367 0.068701 5.3646E-05 0.93143 0.00072731 781.354196680457 785.85564656316 88.557 0.60915 88.557 88.234 88.843 0 83 36 5 0 0 0 0.046844 1 48785 29.936 28.628 1 1.078 0.95316 0 1122900 605410 517530 29221 898 11063 11365 45631 45631 QYYVEAFGDPSER 13 0 1 Unmodified _QYYVEAFGDPSER_ 0 0 0 B2RWP5;Q96L73;Q96MN8;A4QPE5;D6RBV9;D6RA58 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 785.8559 2 780.851895 1559.68924 72752.53 0.45148 0.00035254 1.7044 0.0013309 2.1559 0.0016834 781.355457594845 785.856692317727 88.642 0.36304 88.642 88.448 88.811 0 68 21 5 0 0 0 0.048651 1 48035 29.544 29.544 1 1.6775 1.4393 0 1076600 484570 591990 29222 898 11063 11365 45632 45632 RAADEVLAEAK 11 1 1 Unmodified _RAADEVLAEAK_ 0 0 1 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8293 2 586.817127 1171.6197 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.081 1 31.081 30.581 31.581 -1.9073E-06 0 0 0 0.033815 1 15306 58.699 21.15 1 29223 1851 11064 11366 45633 45633 RAADEVLAEAK 11 1 1 Unmodified _RAADEVLAEAK_ 0 0 1 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8293 2 586.817127 1171.6197 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.089 1 31.089 30.589 31.589 0 0 0 0 0.023462 1 15310 62.466 14.863 1 29224 1851 11064 11366 45634 45634 RAADEVLAEAK 11 1 1 Unmodified _RAADEVLAEAK_ 0 0 1 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.8157 2 586.817127 1171.6197 82124.23 1.0898 0.00063951 -1.4238 -0.00083549 -0.33397 -0.00019598 586.81564303278 595.827288927635 29.718 0.40829 29.718 29.444 29.853 0 80 31 4 0 0 0 0.0092656 1 14325 56.043 24.621 1 2.1485 2.486 0 32961000 10281000 22680000 29225 1851 11064 11366 45635 45635 RAATLAQELEK 11 1 1 Unmodified _RAATLAQELEK_ 0 0 1 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709;Q68EN4 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.358 2 615.346052 1228.67755 79118.76 0.92878 0.00057152 -0.14285 -8.7905E-05 0.78593 0.00048362 615.345831884033 624.357233830339 38.728 0.28817 38.728 38.58 38.868 0 94 23 6 0 0 0 0.0023601 2 19935 67.726 22.565 1 0.92885 1.0087 0 15555000 8585700 6968900 29226 1739 11065 11367 45636;45637 45637 RAAVQFLNNAWGIQK 15 1 1 Unmodified _RAAVQFLNNAWGIQK_ 0 0 1 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.9835 3 572.649517 1714.92672 83133 0.31444 0.00018006 -0.21535 -0.00012332 0.09909 5.6744E-05 572.983787570939 578.656604707155 100.84 0.38707 100.84 100.64 101.03 0 89 24 5 0 0 0 0.00011143 1 57043 46.797 46.797 1 0.85408 0.70542 0 4086400 1996400 2090000 29227 30 11066 11368 45638 45638 RAAVQFLNNAWGIQK 15 1 1 Unmodified _RAAVQFLNNAWGIQK_ 0 0 1 A0A024QZW2;Q9UMY1 A0A024QZW2 A0A024QZW2 NOL7 Nucleolar protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.9835 3 572.649517 1714.92672 87119.85 0.36761 0.00021051 -0.47222 -0.00027042 -0.10461 -5.9902E-05 572.983727152286 578.990594840886 100.52 0.31032 100.52 100.39 100.7 0 88 22 5 0 0 0 0.00014147 1 56044 37.654 37.654 1 0.82387 0.70609 0 2672300 1270600 1401700 29228 30 11066 11368 45639 45639 RAEDGSVIDYELIDQDAR 18 0 2 Unmodified _RAEDGSVIDYELIDQDAR_ 0 0 1 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YM50;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1 V9HW65 V9HW65 HEL-S-270;ANXA2 Annexin;Annexin A2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.3335 3 688.999269 2063.97598 NaN NaN NaN -0.22949 -0.00015812 NaN NaN NaN NaN 97.943 0.28746 97.943 97.803 98.091 0 0 0 0 0.0077172 1 55181 25.207 21.545 1 NaN NaN 0 1143700 1143700 0 29229 193 11067 11369 45640 45640 RAEDGSVIDYELIDQDAR 18 0 2 Unmodified _RAEDGSVIDYELIDQDAR_ 0 0 1 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YM50;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1 V9HW65 V9HW65 HEL-S-270;ANXA2 Annexin;Annexin A2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.9998 3 688.999269 2063.97598 76443.38 0.51084 0.00035197 1.0455 0.00072033 1.5563 0.0010723 688.999519799974 696.007139719546 97.838 0.38839 97.838 97.677 98.066 -7.6294E-06 61 23 5 0 0 0 0.00352 1 54258 25.888 25.888 1 0.65724 0.58504 0 1759200 908950 850300 29230 193 11067 11369 45641 45641 RAEEFLTASQEAL 13 0 1 Unmodified _RAEEFLTASQEAL_ 0 0 1 B4DSD7;E9PFR3;A8K6Y2;A0A024RD11;Q14738;Q59EF0;H0Y8C4 B4DSD7 B4DSD7 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 738.378 2 732.870088 1463.72562 72344.05 0.76595 0.00056134 0.50036 0.0003667 1.2663 0.00092804 732.87041188034 738.376202283271 97.574 0.43491 97.574 97.329 97.764 0 62 24 4 0 0 0 0.020097 1 54837 39.917 35.763 1 1.0792 0.9467 0 1691900 929110 762820 29231 375 11068 11370 45642 45642 RAEEIWQQSVIGDYLAR 17 0 2 Unmodified _RAEEIWQQSVIGDYLAR_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.6921 3 678.684956 2033.03304 73522.16 0.76501 0.0005192 0.3565 0.00024195 1.1215 0.00076115 679.019017352802 685.691576601914 107.47 0.96764 107.47 106.93 107.9 0 294 71 7 0 0 0 3.136E-05 1 66897 48.907 45.572 1 0.51012 0.55208 0 22603000 14900000 7702900 29232 1244 11069 11371 45643 45643 RAEEIWQQSVIGDYLAR 17 0 2 Unmodified _RAEEIWQQSVIGDYLAR_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.6914 3 678.684956 2033.03304 74498.24 0.80072 0.00054344 -0.183 -0.0001242 0.61772 0.00041924 679.019207384434 685.356863348301 106.2 0.90825 106.2 105.87 106.78 0 313 70 6 0 0 0 4.0607E-06 2 67568 75.239 69.276 1 0.54228 0.61336 0 30793000 18941000 11852000 29233 1244 11069 11371 45644;45645 45645 RAEEIWQQSVIGDYLAR 17 0 2 Unmodified _RAEEIWQQSVIGDYLAR_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.6923 3 678.684956 2033.03304 72937.48 0.4713 0.00031987 -0.13216 -8.9693E-05 0.33915 0.00023017 679.019229891755 685.357021707611 117.12 0.7908 117.12 116.84 117.63 0 129 31 7 0 0 0 1.2297E-07 1 68880 75.97 63.221 1 1.4372 1.181 0 28724000 10645000 18079000 29234 1244 11069 11371 45646 45646 RAEEIWQQSVIGDYLAR 17 0 2 Unmodified _RAEEIWQQSVIGDYLAR_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0;E9PLT2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.6917 3 678.684956 2033.03304 72437.45 0.69253 0.00047001 -0.12988 -8.8147E-05 0.56265 0.00038187 679.01920885588 685.357113976232 116.9 0.73497 116.9 116.66 117.4 -7.6294E-06 131 33 7 0 0 0 3.7033E-06 1 67853 73.138 63.623 1 1.3101 1.2123 0 20433000 9153900 11279000 29235 1244 11069 11371 45647 45647 RAEFTVETR 9 0 2 Unmodified _RAEFTVETR_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.7993 2 554.790912 1107.56727 82942.13 0.53316 0.00029579 -0.14865 -8.2467E-05 0.38452 0.00021333 554.790837486546 564.799069123197 27.828 0.24794 27.828 27.695 27.943 0 70 14 6 0 0 0 0.023496 1 12965 56.043 15.014 1 1.3113 1.4268 0 62158000 22439000 39719000 29236 1504 11070 11372 45648 45648 RAEFTVETR 9 0 2 Unmodified _RAEFTVETR_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.7926 2 554.790912 1107.56727 83592.4 0.77327 0.00042901 -0.46891 -0.00026015 0.30437 0.00016886 554.791319992419 564.798345398629 26.993 0.40125 26.993 26.804 27.205 0 76 18 6 0 0 0 0.030093 1 12365 52.49 11.042 1 1.485 1.685 0 34090000 13277000 20813000 29237 1504 11070 11372 45649 45649 RAEVSPMYGVQK 12 1 1 Oxidation (M) _RAEVSPM(ox)YGVQK_ RAEVSPM(1)YGVQK RAEVSPM(56.4)YGVQK 0 1 1 B4DSV8;B4DPG9;Q9H3K2;B4DNL0;Q6FIA7;Q658I8 B4DSV8 B4DSV8 GHITM;DKFZp566C0746 Growth hormone-inducible transmembrane protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.8624 2 690.850644 1379.68673 74064.18 0.5809 0.00040131 -0.0043137 -2.9801E-06 0.57658 0.00039833 690.851169910552 699.86184078585 24.189 0.30071 24.189 23.995 24.296 0 47 13 7 0 0 0 0.0076057 1 10003 56.404 56.404 1 2.5918 2.8299 0 16499000 4629000 11870000 29238 1021 11071 11373 45650 45650 808 RAEVSPMYGVQK 12 1 1 Oxidation (M) _RAEVSPM(ox)YGVQK_ RAEVSPM(1)YGVQK RAEVSPM(50.11)YGVQK 0 1 1 B4DSV8;B4DPG9;Q9H3K2;B4DNL0;Q6FIA7;Q658I8 B4DSV8 B4DSV8 GHITM;DKFZp566C0746 Growth hormone-inducible transmembrane protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8657 2 690.850644 1379.68673 NaN NaN NaN -0.067685 -4.676E-05 NaN NaN NaN NaN 23.726 0.24727 23.726 23.57 23.817 -1.9073E-06 0 0 0 0.012759 1 9521 50.108 25.332 1 NaN NaN 0 9404800 0 9404800 29239 1021 11071 11373 45651 45651 808 RAFDSAVAK 9 1 1 Unmodified _RAFDSAVAK_ 0 0 1 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.7757 2 482.764166 963.513779 NaN NaN NaN -0.68433 -0.00033037 NaN NaN NaN NaN 20.695 0.28565 20.695 20.585 20.871 0 0 0 0 0.0086778 1 7091 68.016 29.713 1 NaN NaN 0 35073000 0 35073000 29240 1774;1029;1128 11072 11374 45652 45652 RAFDSAVAK 9 1 1 Unmodified _RAFDSAVAK_ 0 0 1 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.7642 2 482.764166 963.513779 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.726 1 20.726 20.226 21.226 0 0 0 0 0.0012857 1 7129 103.8 51.95 1 29241 1774;1029;1128 11072 11374 45653 45653 RAFLIEEQK 9 1 1 Unmodified _RAFLIEEQK_ 0 0 1 A0A024RDH8;P49207;Q5MK14 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.3194 2 567.319306 1132.62406 79830.38 0.36627 0.00020779 -0.10884 -6.1745E-05 0.25744 0.00014605 567.319377709687 576.33038740446 39.674 0.813 39.674 39.495 40.308 0 418 68 10 0 0 0 2.1579E-11 2 20558 153.08 56.591 1 0.89023 1.0876 0 967570000 462630000 504940000 29242 386 11073 11375 45654;45655 45655 RAFLIEEQK 9 1 1 Unmodified _RAFLIEEQK_ 0 0 1 A0A024RDH8;P49207;Q5MK14 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.3193 2 567.319306 1132.62406 79047.55 0.39695 0.0002252 -0.45042 -0.00025553 -0.053477 -3.0338E-05 567.319153696905 576.330317094725 38.086 0.8262 38.086 37.807 38.633 -3.8147E-06 418 66 12 0 0 0 2.2072E-05 2 19823 124.08 36.758 1 0.79848 0.956 0 1239500000 662650000 576860000 29243 386 11073 11375 45656;45657 45657 RAFLIEEQK 9 1 1 Unmodified _RAFLIEEQK_ 0 0 1 A0A024RDH8;P49207;Q5MK14 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.3304 2 567.319306 1132.62406 79025.5 0.5335 0.00030267 -0.53831 -0.0003054 -0.0048116 -2.7297E-06 567.318867331065 576.330342047473 44.658 1.5094 44.658 44.242 45.751 0 579 110 10 0 0 0 0.0082554 1 21095 68.016 27.949 1 0.89192 0.79937 0 87287000 47037000 40250000 29244 386 11073 11375 45658 45658 RAFVPQLR 8 0 2 Unmodified _RAFVPQLR_ 0 0 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.7987 2 493.798343 985.582134 86247.35 0.2162 0.00010676 0.022203 1.0964E-05 0.2384 0.00011772 493.798308258773 503.806620978109 45.721 0.58069 45.721 45.553 46.134 0 181 50 5 0 0 0 0.021429 1 25255 66.799 39.837 1 0.79309 0.89807 0 31450000 15407000 16043000 29245 695 11074 11376 45659 45659 RAGELTEDEVER 12 0 2 Unmodified _RAGELTEDEVER_ 0 0 1 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.3436 2 702.341694 1402.66884 71735.93 0.76525 0.00053747 0.067962 4.7733E-05 0.83322 0.0005852 702.341810689928 712.350035457831 25.085 0.60053 25.085 24.773 25.374 0 127 20 10 0 0 0 1.6873E-17 1 10654 162.68 162.68 1 1.0098 1.2186 0 377130000 189940000 187190000 29246 1639 11075 11377 45660 45660 RAGELTEDEVER 12 0 2 Unmodified _RAGELTEDEVER_ 0 0 1 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.5634 3 468.563555 1402.66884 86576.3 0.28951 0.00013565 -0.26229 -0.0001229 0.027222 1.2755E-05 468.56348441608 475.235542137106 25.069 0.65346 25.069 24.675 25.328 0 115 26 10 0 0 0 3.5664E-13 1 10663 128.54 119.59 1 1.061 1.27 0 273260000 132010000 141250000 29247 1639 11075 11377 45661 45661 RAGELTEDEVER 12 0 2 Unmodified _RAGELTEDEVER_ 0 0 1 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.2357 3 468.563555 1402.66884 86212.2 0.12579 5.8939E-05 0.49671 0.00023274 0.6225 0.00029168 468.563387546952 475.236572987965 28.896 0.84756 28.896 28.361 29.209 1.9073E-06 280 58 6 0 0 0 0.00021032 2 11746 65.043 65.043 1 1.2053 1.0098 0 13659000 6701100 6957900 29248 1639 11075 11377 45662;45663 45663 RAGELTEDEVER 12 0 2 Unmodified _RAGELTEDEVER_ 0 0 1 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.3506 2 702.341694 1402.66884 72014.85 0.51142 0.00035919 0.095478 6.7058E-05 0.6069 0.00042625 702.34168736092 712.349991682188 28.937 0.88419 28.937 28.397 29.281 0 312 64 9 0 0 0 0.01245 1 11722 59.198 59.198 1 0.84616 0.69678 0 26528000 13507000 13021000 29249 1639 11075 11377 45664 45664 RAGELTEDEVER 12 0 2 Unmodified _RAGELTEDEVER_ 0 0 1 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.5635 3 468.563555 1402.66884 87789.37 -0.070171 -3.288E-05 -0.26531 -0.00012432 -0.33548 -0.0001572 468.56341258956 475.235684945617 29.055 0.70357 29.055 28.656 29.36 0 216 44 7 0 0 0 0.00011906 2 11274 70.438 61.484 1 0.97997 0.89814 0 10958000 5566700 5391000 29250 1639 11075 11377 45665;45666 45665 RAGFVPVYLR 10 0 2 Unmodified _RAGFVPVYLR_ 0 0 1 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.2328 3 393.232864 1176.67676 94070.8 0.0036495 1.4351E-06 0.29971 0.00011786 0.30336 0.00011929 393.232908921701 399.905242301748 74.279 0.75879 74.279 73.967 74.726 -7.6294E-06 148 64 5 0 0 0 0.010042 1 43655 38.75 38.75 1 0.99365 1.096 0 11541000 5028600 6512700 29251 2023 11076 11378 45667 45667 RAGFVPVYLR 10 0 2 Unmodified _RAGFVPVYLR_ 0 0 1 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.2329 3 393.232864 1176.67676 95424.66 0.089131 3.5049E-05 -0.11486 -4.5165E-05 -0.025725 -1.0116E-05 393.232610869642 399.904977517397 71.147 0.87722 71.147 70.725 71.602 0 254 65 6 0 0 0 0.0062342 2 42464 44.863 44.863 1 0.964 1.0924 0 32323000 16601000 15722000 29252 2023 11076 11378 45668;45669 45669 RAGFVPVYLR 10 0 2 Unmodified _RAGFVPVYLR_ 0 0 1 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 393.2329 3 393.232864 1176.67676 93577.75 0.18262 7.1812E-05 -0.23332 -9.175E-05 -0.050703 -1.9938E-05 393.232618761563 399.904882146978 81.908 1.1971 81.908 81.623 82.82 0 256 72 7 0 0 0 0.03374 1 44374 25.437 25.437 1 1.4145 1.2107 0 5999900 2596800 3403100 29253 2023 11076 11378 45670 45670 RAIFATQR 8 0 2 Unmodified _RAIFATQR_ 0 0 1 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.7801 2 481.780151 961.545748 87930.78 -0.65523 -0.00031568 0.52597 0.0002534 -0.12926 -6.2276E-05 481.780412314602 491.788691226347 24.498 0.25679 24.498 24.364 24.621 0 26 8 4 0 0 0 0.0027825 1 10246 106.94 60.105 1 0.42708 0.46313 0 26545000 18282000 8263500 29254 1479 11077 11379 45671 45671 RAIFATQR 8 0 2 Unmodified _RAIFATQR_ 0 0 1 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.7802 2 481.780151 961.545748 88614.48 -0.34193 -0.00016474 0.16352 7.8781E-05 -0.17841 -8.5954E-05 481.780296394398 491.788588109294 23.876 0.34695 23.876 23.725 24.072 0 64 13 8 0 0 0 0.019523 1 9660 69.423 32.403 1 0.30925 0.35491 0 53055000 38026000 15030000 29255 1479 11077 11379 45672 45672 RAIFATQR 8 0 2 Unmodified _RAIFATQR_ 0 0 1 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.7803 2 481.780151 961.545748 87512.88 0.18488 8.9074E-05 -0.42391 -0.00020423 -0.23903 -0.00011516 481.780106439198 491.788756286565 26.16 0.50015 26.16 25.979 26.48 -1.9073E-06 95 21 8 0 0 0 0.057665 1 9245 49.423 18.705 1 0.46665 0.42728 0 10288000 6941800 3346100 29256 1479 11077 11379 45673 45673 RAILASER 8 0 2 Unmodified _RAILASER_ 0 0 1 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2722 2 458.272158 914.529764 NaN NaN NaN -1.1101 -0.00050873 NaN NaN NaN NaN 20.337 0.32136 20.337 20.237 20.559 0 0 0 0 0.0081026 1 6807 81.163 22.738 1 NaN NaN 0 23818000 23818000 0 29257 1450 11078 11380 45674 45674 RAILASER 8 0 2 Unmodified _RAILASER_ 0 0 1 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 458.2719 2 458.272158 914.529764 86649.07 -0.14922 -6.8384E-05 -0.99918 -0.0004579 -1.1484 -0.00052628 458.272219284389 468.279325345624 21.416 0.58197 21.416 21.102 21.684 0 65 24 7 0 0 0 0.0263 1 6461 61.582 13.021 1 1.7401 1.461 0 12578000 4659600 7918500 29258 1450 11078 11380 45675 45675 RAIQTGEELFFDYR 14 0 2 Unmodified _RAIQTGEELFFDYR_ 0 0 1 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.9658 3 582.293288 1743.85803 83436.7 0.57177 0.00033294 0.11869 6.9113E-05 0.69046 0.00040205 582.62763339611 588.965557843932 104.44 0.61698 104.44 104.18 104.8 -7.6294E-06 131 38 6 0 0 0 0.015392 1 59420 23.839 19.037 1 2.7809 2.5376 0 2218200 603670 1614500 29259 456 11079 11381 45676 45676 RAIQTGEELFFDYR 14 0 2 Unmodified _RAIQTGEELFFDYR_ 0 0 1 A0A090N8E9;Q15910;F2YMM1;S4S3R8;Q75MP9;Q75MQ0 A0A090N8E9 A0A090N8E9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.9659 3 582.293288 1743.85803 84920.02 0.35597 0.00020728 0.52969 0.00030844 0.88566 0.00051571 582.627715839519 588.965787801762 104.04 0.54403 104.04 103.79 104.34 0 107 36 5 0 0 0 0.0017948 1 58346 40.857 36.055 1 2.1355 1.9111 0 2224400 798350 1426100 29260 456 11079 11381 45677 45677 RAITYQIAK 9 1 1 Unmodified _RAITYQIAK_ 0 0 1 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.3282 2 532.316566 1062.61858 83201.81 0.47128 0.00025087 -0.36289 -0.00019317 0.10839 5.7698E-05 532.316145588346 541.327653823803 34.878 0.74446 34.878 34.604 35.349 -3.8147E-06 182 64 6 0 0 0 0.040841 1 15419 48.283 16.349 1 1.2393 1.0428 0 7296200 3235000 4061200 29261 2063 11080 11382 45678 45678 RALEQQVEEMK 11 1 1 Oxidation (M) _RALEQQVEEM(ox)K_ RALEQQVEEM(1)K RALEQQVEEM(123.96)K 0 1 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.8569 2 688.845558 1375.67656 72372.91 0.48447 0.00033372 0.024781 1.707E-05 0.50925 0.00035079 688.845606492873 697.856965697758 21.006 0.29428 21.006 20.82 21.114 0 91 14 9 0 0 0 2.1439E-08 2 7333 123.96 123.96 1 2.4886 2.9376 0 36665000 10044000 26621000 29262 81 11081 11383 45679;45680 45679 51 RALEQQVEEMK 11 1 1 Oxidation (M) _RALEQQVEEM(ox)K_ RALEQQVEEM(1)K RALEQQVEEM(94.82)K 0 1 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8573 2 688.845558 1375.67656 72088.23 0.82978 0.00057159 0.26132 0.00018001 1.0911 0.0007516 688.845965738059 697.856776736348 20.649 0.31297 20.649 20.516 20.829 0 47 8 8 0 0 0 0.00035403 3 6919 94.82 79.178 1 2.5117 2.9187 0 39006000 10107000 28899000 29263 81 11081 11383 45681;45682;45683 45681 51 RALEQQVEEMK 11 1 1 Oxidation (M) _RALEQQVEEM(ox)K_ RALEQQVEEM(1)K RALEQQVEEM(40.71)K 0 1 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.8576 2 688.845558 1375.67656 73049.16 0.28103 0.00019359 0.13648 9.4011E-05 0.41751 0.0002876 688.845682595338 697.857124015735 22.958 0.32205 22.958 22.778 23.1 0 56 12 8 0 0 0 0.061009 1 7628 40.715 33.827 1 1.9748 1.6514 0 3442600 1024800 2417800 29264 81 11081 11383 45684 45684 51 RALEQQVEEMK 11 1 1 Unmodified _RALEQQVEEMK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8607 2 680.848101 1359.68165 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.851 1 33.851 33.351 34.351 0 0 0 0 0.028816 1 17049 60.518 31.432 1 29265 81 11081 11384 45685 45685 RALEQQVEEMK 11 1 1 Unmodified _RALEQQVEEMK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.3615 2 680.848101 1359.68165 73456.98 0.30323 0.00020645 0.07471 5.0866E-05 0.37794 0.00025732 680.848066839385 689.859415224422 40.642 0.57213 40.642 40.432 41.004 0 163 44 5 0 0 0 0.060787 1 18153 36.585 36.585 1 3.317 2.8222 0 3143100 837250 2305900 29266 81 11081 11384 45686 45686 RALEYTIYNQELNETR 16 0 2 Unmodified _RALEYTIYNQELNETR_ 0 0 1 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.3458 3 671.672716 2011.99632 84054.22 0.49494 0.00033244 -0.25313 -0.00017002 0.24181 0.00016242 671.672894869285 678.34508533234 82.688 0.28763 82.688 82.541 82.828 0 45 16 5 0 0 0 0.042682 1 44152 14.928 5.398 1 1.6981 1.5105 0 773710 315850 457860 29267 803 11082 11385 45687 45687 RALQTQNSEIVK 12 1 1 Unmodified _RALQTQNSEIVK_ 0 0 1 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.3906 2 693.888615 1385.76268 73024.03 0.348 0.00024147 0.18407 0.00012773 0.53207 0.0003692 693.888513526668 702.900110401839 24.653 0.20573 24.653 24.566 24.772 -1.9073E-06 29 8 5 0 0 0 0.021164 1 10405 44.863 27.95 1 1.0227 1.144 0 6912900 3149600 3763300 29268 2143 11083 11386 45688 45688 RANEFLEVGK 10 1 1 Unmodified _RANEFLEVGK_ 0 0 1 Q05BS0;Q6P1R0;Q3B770;Q7Z5T5;Q24JU4;J9R021;Q14152 Q05BS0 Q05BS0 EIF3A;eIF3a Eukaryotic translation initiation factor 3 subunit A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8256 2 581.814387 1161.61422 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.079 1 42.079 41.579 42.579 0 0 0 0 0.0014987 1 22291 72.643 46.906 1 29269 1340 11084 11387 45689 45689 RANPQVGVAFPHIK 14 1 1 Unmodified _RANPQVGVAFPHIK_ 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.9673 3 511.959803 1532.85758 84050.12 0.30239 0.00015481 -0.027025 -1.3836E-05 0.27536 0.00014098 511.959779133644 517.967332521452 69.162 0.81606 69.162 68.693 69.509 0 235 55 6 0 0 0 0.0064985 2 36302 32.275 30.637 1 0.2318 0.19432 0 6796000 5615500 1180500 29270 1476 11085 11388 45690;45691 45691 RAPDQAAEIGSR 12 0 2 Unmodified _RAPDQAAEIGSR_ 0 0 1 Q0VAB1;A0A024R0M6;Q3ZCQ8;M0R003;M0QXC3;M0R2Z3;M0R303;M0R2D2;M0R1Y4 Q0VAB1 Q0VAB1 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3017 2 635.828557 1269.64256 78593.56 0.24342 0.00015478 0.31647 0.00020122 0.5599 0.000356 635.829007789201 645.836790338836 19.849 0.17381 19.849 19.739 19.913 0 20 6 4 0 0 0 0.040105 1 6179 41.399 30.57 1 0.8345 0.83519 0 8867400 4769700 4097700 29271 53 11086 11389 45692 45692 RAPFDLFENK 10 1 1 Unmodified _RAPFDLFENK_ 0 0 1 B4DMA2;A0A024RD80;P08238;B4DGL0;Q58FF7 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.8338 2 618.822212 1235.62987 NaN NaN NaN 0.29726 0.00018395 NaN NaN NaN NaN 80.903 1.3049 80.903 80.594 81.899 0 0 0 0 0.0035885 2 48021 76.228 43.908 1 NaN NaN 0 81584000 0 81584000 29272 379 11087 11390 45693;45694 45693 RAPFDLFENK 10 1 1 Unmodified _RAPFDLFENK_ 0 0 1 B4DMA2;A0A024RD80;P08238;B4DGL0;Q58FF7 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.8336 2 618.822212 1235.62987 76550.5 0.68182 0.00042192 0.17598 0.0001089 0.8578 0.00053083 618.822199392094 627.833358309414 79.325 1.0404 79.325 78.785 79.826 0 493 88 9 0 0 0 3.6645E-08 2 48071 121.5 121.5 1 2.1349 2.5241 0 166720000 50851000 115870000 29273 379 11087 11390 45695;45696 45696 RAPFDLFENK 10 1 1 Unmodified _RAPFDLFENK_ 0 0 1 B4DMA2;A0A024RD80;P08238;B4DGL0;Q58FF7 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.8339 2 618.822212 1235.62987 76206.51 0.72341 0.00044766 0.37106 0.00022962 1.0945 0.00067729 618.822033428845 627.833481373917 91.214 0.95477 91.214 90.812 91.766 -7.6294E-06 355 64 8 0 0 0 0.046215 1 50700 43.77 43.77 1 1.3906 1.2052 0 16171000 6505600 9665700 29274 379 11087 11390 45697 45697 RAPFDLFENK 10 1 1 Unmodified _RAPFDLFENK_ 0 0 1 B4DMA2;A0A024RD80;P08238;B4DGL0;Q58FF7 B4DMA2 B4DMA2 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.8331 2 618.822212 1235.62987 77933.48 0.46758 0.00028935 0.22287 0.00013792 0.69046 0.00042727 618.821914004006 627.83346779389 90.977 1.0263 90.977 90.505 91.531 0 262 64 7 0 0 0 0.048139 1 49668 43.308 43.308 1 1.3449 1.1396 0 15305000 6213300 9091800 29275 379 11087 11390 45698 45698 RAPFDLFENR 10 0 2 Unmodified _RAPFDLFENR_ 0 0 1 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8353 2 632.825286 1263.63602 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.51 1 81.51 81.01 82.01 -7.6294E-06 0 0 0 0.023579 1 49799 61.161 40.832 1 29276 1348 11088 11391 45699 45699 RAPPPAVAAR 10 0 2 Unmodified _RAPPPAVAAR_ 0 0 1 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.3008 2 503.30125 1004.58795 86900.22 0.21141 0.0001064 0.12129 6.1043E-05 0.3327 0.00016745 503.301130561548 513.309556066088 17.969 0.61307 17.969 17.683 18.296 0 117 34 5 0 0 0 0.0025524 1 4987 73.26 45.086 1 0.84683 0.91838 0 26717000 13652000 13065000 29277 1861 11089 11392 45700 45700 RAPPPAVAAR 10 0 2 Unmodified _RAPPPAVAAR_ 0 0 1 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.3096 2 503.30125 1004.58795 84654.13 0.11818 5.9481E-05 0.32553 0.00016384 0.44371 0.00022332 503.301331357816 513.309596500887 17.892 0.58995 17.892 17.632 18.222 0 120 32 6 0 0 0 0.0011137 2 4758 83.206 55.952 1 0.80551 0.89803 0 25270000 13642000 11627000 29278 1861 11089 11392 45701;45702 45702 RAPPPAVAAR 10 0 2 Unmodified _RAPPPAVAAR_ 0 0 1 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.3093 2 503.30125 1004.58795 84604.35 -0.13881 -6.9863E-05 0.71816 0.00036145 0.57935 0.00029159 503.301809975527 513.309705226792 18.65 0.5272 18.65 18.482 19.009 0 92 29 5 0 0 0 0.06163 1 4157 40.067 17.936 1 1.3747 1.2437 0 3874400 1565800 2308700 29279 1861 11089 11392 45703 45703 RAPSSAQYLEEK 12 1 1 Unmodified _RAPSSAQYLEEK_ 0 0 1 B3KSY4;B4DKU9;A0A0A6YYL4;P57737;I3L442 B3KSY4 B3KSY4 hCG_1787779;CORO7-PAM16;CORO7 Coronin;Coronin-7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.8633 2 689.851698 1377.68884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.596 1 25.596 25.096 26.096 0 0 0 0 0.024358 1 11209 60.434 23.089 1 29280 495 11090 11393 45704 45704 RAQGGDGVLDATGEEANSNAENPK 24 1 1 Unmodified _RAQGGDGVLDATGEEANSNAENPK_ 0 0 1 Q6P158;Q59G60;H7C109;Q8N4U2 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.05 3 800.705584 2399.09492 68859.27 0.9043 0.00072408 -0.42446 -0.00033986 0.47985 0.00038422 801.038965459635 807.047248442731 36.979 0.30954 36.979 36.849 37.158 0 66 28 5 0 0 0 1.4581E-12 2 18751 72.302 72.302 1 0.88172 0.96156 0 16284000 5626000 10658000 29281 1850 11091 11394 45705;45706 45705 RAQGGDGVLDATGEEANSNAENPK 24 1 1 Unmodified _RAQGGDGVLDATGEEANSNAENPK_ 0 0 1 Q6P158;Q59G60;H7C109;Q8N4U2 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.705 3 800.705584 2399.09492 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.041 1 37.041 36.541 37.541 0 0 0 0 0.00012281 1 18805 53.496 45.874 1 29282 1850 11091 11394 45707 45707 RAQGGDGVLDATGEEANSNAENPK 24 1 1 Unmodified _RAQGGDGVLDATGEEANSNAENPK_ 0 0 1 Q6P158;Q59G60;H7C109;Q8N4U2 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.7132 3 800.705584 2399.09492 69371.59 0.89819 0.00071919 -0.2403 -0.00019241 0.65789 0.00052678 801.039524108893 806.713103885464 35.803 0.31236 35.803 35.689 36.002 0 67 23 5 0 0 0 2.7671E-16 2 18295 92.518 92.518 1 1.0339 1.1626 0 13284000 7774300 5510100 29283 1850 11091 11394 45708;45709 45708 RAQGGDGVLDATGEEANSNAENPK 24 1 1 Unmodified _RAQGGDGVLDATGEEANSNAENPK_ 0 0 1 Q6P158;Q59G60;H7C109;Q8N4U2 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.0476 3 800.705584 2399.09492 68641.95 0.54447 0.00043596 0.065718 5.2621E-05 0.61019 0.00048858 801.039954935942 806.713067758535 43.096 0.43039 43.096 42.882 43.313 0 129 26 8 0 0 0 0.017195 2 20299 17.926 17.926 1 1.1811 1.0124 0 2742300 1267000 1475200 29284 1850 11091 11394 45710;45711 45711 RAQGGDGVLDATGEEANSNAENPK 24 1 1 Unmodified _RAQGGDGVLDATGEEANSNAENPK_ 0 0 1 Q6P158;Q59G60;H7C109;Q8N4U2 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.713 3 800.705584 2399.09492 68385.23 0.3114 0.00024934 0.18628 0.00014915 0.49768 0.00039849 801.039869633159 807.047487212732 43.223 0.31123 43.223 43.056 43.367 0 102 17 8 0 0 0 3.5413E-06 2 19778 43.884 43.884 1 0.94389 0.80434 0 3030700 1510000 1520800 29285 1850 11091 11394 45712;45713 45712 RARQKLRCLSR 11 1 4 Unmodified _RARQKLRCLSR_ 0 0 4 A0A183 A0A183 A0A183 LCE6A Late cornified envelope protein 6A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.4476 2 722.42551 1442.83647 NaN NaN NaN -2.803 -0.0020249 NaN NaN NaN NaN 131.61 0.19286 131.61 131.51 131.7 0 0 0 0 0.0044105 1 85949 58.676 5.8865 1 NaN NaN 0 2037200 0 2037200 29286 629 11092 11395 45714 45714 RARQKLRCLSR 11 1 4 Unmodified _RARQKLRCLSR_ 0 0 4 A0A183 A0A183 A0A183 LCE6A Late cornified envelope protein 6A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.9736 2 722.42551 1442.83647 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.22 1 131.22 130.72 131.72 0 0 0 0 0.028864 1 87793 48.794 6.4583 1 29287 629 11092 11395 45715 45715 RASAILR 7 0 2 Unmodified _RASAILR_ 0 0 1 P46779;O60251 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.7509 2 393.750862 785.487171 94603.78 -0.18092 -7.1238E-05 0.2222 8.749E-05 0.041274 1.6252E-05 393.750861950889 403.75917601423 20.333 0.72681 20.333 20.144 20.871 0 89 29 8 0 0 0 0.017138 1 6740 123.45 9.02 1 0.85488 0.93462 0 297360000 160060000 137290000 29288 1572 11093 11396 45716 45716 RASAILR 7 0 2 Unmodified _RASAILR_ 0 0 1 P46779;O60251 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.7507 2 393.750862 785.487171 93405.02 0.081399 3.2051E-05 -0.202 -7.9537E-05 -0.1206 -4.7486E-05 393.750680119123 403.758973658342 19.91 0.51992 19.91 19.76 20.28 0 75 19 8 0 0 0 0.030502 1 6210 96.285 0 1 0.96722 1.135 0 126390000 64640000 61749000 29289 1572 11093 11396 45717 45717 RASAILR 7 0 2 Unmodified _RASAILR_ 0 0 1 P46779;O60251 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 393.7507 2 393.750862 785.487171 92258.7 -0.24855 -9.7866E-05 0.17522 6.8992E-05 -0.073332 -2.8875E-05 393.750850223858 403.759140811555 21.279 0.28331 21.279 21.191 21.475 0 47 10 7 0 0 0 0.050793 1 6359 68.915 0 1 0.91963 0.74699 0 44884000 22847000 22037000 29290 1572 11093 11396 45718 45718 RASAILR 7 0 2 Unmodified _RASAILR_ 0 0 1 P46779;O60251 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 393.7505 2 393.750862 785.487171 95241.06 -0.45746 -0.00018012 0.25267 9.949E-05 -0.20479 -8.0635E-05 393.75089017798 403.759145312867 20.677 0.47851 20.677 20.507 20.985 0 117 24 8 0 0 0 0.062244 1 5515 60.972 7.6205 1 0.87739 0.80313 0 10100000 5423400 4676600 29291 1572 11093 11396 45719 45719 RATAAECLR 9 0 2 Unmodified _RATAAECLR_ 0 0 1 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.2809 2 524.271832 1046.52911 81608.45 0.2215 0.00011613 -0.069216 -3.6288E-05 0.15229 7.9841E-05 524.271522387341 534.280372379328 17.798 0.27656 17.798 17.617 17.894 0 33 8 8 0 0 0 0.029928 1 4887 52.579 27.656 1 0.84476 0.91675 0 14755000 7418800 7336200 29292 1988 11094 11397 45720 45720 RATVLESEGTR 11 0 2 Unmodified _RATVLESEGTR_ 0 0 1 Q9UJZ1;A0A087WYB4;F2Z2I8;Q6ZNW0 Q9UJZ1 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.834 2 609.825483 1217.63641 79401.2 0.31133 0.00018985 0.014807 9.0294E-06 0.32613 0.00019888 609.82541101339 619.833742317497 20.815 0.31897 20.815 20.66 20.979 0 47 12 7 0 0 0 0.0238 1 7194 46.955 31.804 1 1.081 1.1652 0 16333000 6926200 9406900 29293 2104 11095 11398 45721 45721 RAVFSADSK 9 1 1 Unmodified _RAVFSADSK_ 0 0 1 A8K330;Q8IWA0;F8WE20;F8WC81 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.773 2 490.761623 979.508694 87568.13 -0.17611 -8.6429E-05 0.54547 0.00026769 0.36936 0.00018127 490.761814895148 499.773183541598 21.243 0.22911 21.243 21.125 21.354 0 40 11 6 0 0 0 0.022771 1 6332 56.434 27.285 1 1.1099 0.91252 0 4422800 2147100 2275700 29294 716 11096 11399 45722 45722 RAVLETIR 8 0 2 Unmodified _RAVLETIR_ 0 0 1 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2957 2 479.295633 956.576714 85795.51 0.2512 0.0001204 -0.17651 -8.4601E-05 0.074684 3.5796E-05 479.295969910109 489.303385491347 30.984 0.68735 30.984 30.433 31.12 0 135 59 5 0 0 0 0.014626 2 15202 77.355 14.697 1 1.1069 1.2474 0 29264000 13587000 15677000 29295 907 11097 11400 45723;45724 45724 RAYDIAGSTK 10 1 1 Unmodified _RAYDIAGSTK_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.297 2 541.285463 1080.55637 80903.33 0.18725 0.00010136 -0.015421 -8.3474E-06 0.17183 9.3009E-05 541.285676458136 550.29656391159 22.307 0.53777 22.307 22.132 22.67 0 168 24 10 0 0 0 7.9841E-06 2 6610 117.83 71.406 1 1.3673 1.1703 0 122620000 52222000 70401000 29296 1471 11098 11401 45725;45726 45726 RAYVEIEYEQETEPVAK 17 1 1 Unmodified _RAYVEIEYEQETEPVAK_ 0 0 1 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 691.3483 3 685.340743 2053.0004 73273.75 0.48244 0.00033063 0.030634 2.0995E-05 0.51307 0.00035163 685.674984843493 691.348350264871 77.087 0.48263 77.087 76.844 77.327 -7.6294E-06 165 30 9 0 0 0 0.00022707 2 40287 44.587 44.587 1 1.2777 1.0804 0 10167000 4004500 6162100 29297 2016 11099 11402 45727;45728 45727 RCATPVIIDEILPSK 15 1 1 Unmodified _RCATPVIIDEILPSK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.3199 3 571.318557 1710.93384 81960.9 0.68268 0.00039003 0.48879 0.00027925 1.1715 0.00066928 571.319262592474 577.325627734798 101.19 0.59644 101.19 100.88 101.48 7.6294E-06 134 46 6 0 0 0 0.0059425 3 63486 27.85 27.85 1 0.69024 0.76796 0 10715000 5960000 4754700 29298 1837 11100 11403 45729;45730;45731 45729 RCATPVIIDEILPSK 15 1 1 Unmodified _RCATPVIIDEILPSK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.654 3 571.318557 1710.93384 79185.41 0.95939 0.00054812 0.017004 9.7149E-06 0.9764 0.00055783 571.31845572085 577.326045046197 113.59 0.4509 113.59 113.39 113.84 0 120 21 8 0 0 0 5.5958E-05 2 66154 56.959 56.959 1 1.1505 0.96618 0 6990200 2946200 4043900 29299 1837 11100 11403 45732;45733 45733 RCATPVIIDEILPSK 15 1 1 Unmodified _RCATPVIIDEILPSK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.3192 3 571.318557 1710.93384 79791.48 0.55845 0.00031905 0.33321 0.00019037 0.89166 0.00050942 571.318680269835 577.326160740258 113.37 0.50639 113.37 113.1 113.61 0 128 24 8 0 0 0 0.00053397 2 65050 42.913 42.913 1 1.0959 0.92686 0 10538000 5595900 4941900 29300 1837 11100 11403 45734;45735 45734 RCATPVIIDEILPSKK 16 2 1 Unmodified _RCATPVIIDEILPSKK_ 0 0 2 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.6968 3 614.016878 1839.0288 77581.97 0.51799 0.00031806 0.042178 2.5898E-05 0.56017 0.00034395 614.350569679528 622.695730283777 98.377 0.46303 98.377 98.191 98.654 0 117 27 6 0 0 0 0.038692 1 55477 23.562 23.562 1 1.1665 1.2084 0 3990500 1522600 2467900 29301 1837 11101 11404 45736 45736 RCATPVIIDEILPSKK 16 2 1 Unmodified _RCATPVIIDEILPSKK_ 0 0 2 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.6957 3 614.016878 1839.0288 77438.09 0.49936 0.00030662 -0.51944 -0.00031895 -0.02008 -1.233E-05 614.350401623378 622.695602534067 98.002 0.56853 98.002 97.69 98.258 0 119 34 5 0 0 0 0.025678 2 54384 25.508 25.508 1 1.0824 1.0537 0 3330800 1324400 2006400 29302 1837 11101 11404 45737;45738 45737 RCGVQSFYTPR 11 0 2 Unmodified _RCGVQSFYTPR_ 0 0 1 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2318 3 457.559311 1369.6561 88610.55 0.23576 0.00010788 0.10309 4.7168E-05 0.33885 0.00015504 457.559241849265 464.231634369483 39.469 0.50381 39.469 39.271 39.775 0 142 42 4 0 0 0 0.00031645 1 20460 54.772 47.047 1 1.2901 1.3909 0 16555000 6799200 9756200 29303 1882 11102 11405 45739 45739 RCGVQSFYTPR 11 0 2 Unmodified _RCGVQSFYTPR_ 0 0 1 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.2318 3 457.559311 1369.6561 87546.66 0.24166 0.00011057 -0.45854 -0.00020981 -0.21687 -9.9232E-05 457.559164970128 464.231339273443 45.11 0.67567 45.11 44.902 45.578 -3.8147E-06 200 48 6 0 0 0 0.00031645 1 21485 55.04 48.608 1 1.7072 1.4184 0 18814000 7250100 11564000 29304 1882 11102 11405 45740 45740 RCGVQSFYTPR 11 0 2 Unmodified _RCGVQSFYTPR_ 0 0 1 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 457.5594 3 457.559311 1369.6561 85584.95 0.38233 0.00017494 -0.47591 -0.00021776 -0.093585 -4.2821E-05 457.55917688482 464.231354967782 44.883 0.80562 44.883 44.664 45.469 0 296 57 8 0 0 0 0.0016611 2 20799 42.629 39.501 1 1.6488 1.5134 0 12075000 4611700 7463400 29305 1882 11102 11405 45741;45742 45741 RCLLIDYNPDSQELDFR 17 0 2 Unmodified _RCLLIDYNPDSQELDFR_ 0 0 1 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.6884 3 718.680994 2153.02115 70499.73 1.0415 0.00074849 -0.23859 -0.00017147 0.80289 0.00057702 718.680061290821 725.687520918012 112.61 0.79705 112.61 112.18 112.98 0 172 40 9 0 0 0 0.038775 2 65376 14.928 14.928 1 1.5417 1.2982 0 11251000 4387200 6863600 29306 493 11103 11406 45743;45744 45743 RCLLIDYNPDSQELDFR 17 0 2 Unmodified _RCLLIDYNPDSQELDFR_ 0 0 1 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.3533 3 718.680994 2153.02115 71402.2 0.76004 0.00054623 0.22007 0.00015816 0.98011 0.00070439 718.681326079184 725.687682197183 112.51 0.56261 112.51 112.27 112.83 0 185 28 10 0 0 0 0.0024611 2 64421 31.883 31.883 1 1.5678 1.4349 0 9993400 3933500 6059900 29307 493 11103 11406 45745;45746 45745 RDDDEPGPWTK 11 1 1 Unmodified _RDDDEPGPWTK_ 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.2994 2 658.299298 1314.58404 NaN NaN NaN 0.5663 0.0003728 NaN NaN NaN NaN 28.157 0.15337 28.157 28.092 28.245 0 0 0 0 0.0030265 2 13221 69.451 46.022 1 NaN NaN 0 3215400 3215400 0 29308 406 11104 11407 45747;45748 45747 RDELTLEGIK 10 1 1 Unmodified _RDELTLEGIK_ 0 0 1 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.3389 2 587.327328 1172.6401 78346.15 0.40316 0.00023679 -0.25748 -0.00015122 0.14569 8.5565E-05 587.327337316271 596.338572840544 58.372 0.85732 58.372 57.913 58.771 0 310 68 6 0 0 0 0.019845 1 32950 51.436 13.708 1 2.2883 2.7193 0 45000000 12461000 32540000 29309 261 11105 11408 45749 45749 RDFNHINVELSLLGK 15 1 1 Unmodified _RDFNHINVELSLLGK_ 0 0 1 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 591.6643 3 585.656449 1753.94752 80722.88 0.56756 0.0003324 0.20819 0.00012193 0.77575 0.00045432 585.65662637119 591.663934503398 105.65 0.42071 105.65 105.48 105.9 0 95 28 7 0 0 0 0.0001247 1 59437 56.215 56.215 1 1.4119 1.1889 0 4181900 1949800 2232000 29310 1537 11106 11409 45750 45750 RDFNQFIK 8 1 1 Unmodified _RDFNQFIK_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.2853 2 534.285266 1066.55598 81723.38 0.64145 0.00034272 -0.13598 -7.2652E-05 0.50547 0.00027006 534.285232625999 543.29631244172 47.244 0.82245 47.244 46.737 47.56 0 296 76 7 0 0 0 0.034879 1 25643 58.23 58.23 1 2.4649 2.9682 0 102970000 27113000 75857000 29311 1391 11107 11410 45751 45751 RDFSEIK 7 1 1 Unmodified _RDFSEIK_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.7374 2 447.737617 893.460681 NaN NaN NaN 0.25408 0.00011376 NaN NaN NaN NaN 22.732 0.50865 22.732 22.485 22.994 0 0 0 0 0.032734 1 8687 82.305 32.28 1 NaN NaN 0 16984000 16984000 0 29312 44 11108 11411 45752 45752 RDGSNIIYTAK 11 1 1 Unmodified _RDGSNIIYTAK_ 0 0 1 B4DNN2;Q59E89;Q9UDY4 B4DNN2 B4DNN2 DNAJB4 DnaJ homolog subfamily B member 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3313 2 619.330402 1236.64625 77171.25 0.51883 0.00032133 0.25283 0.00015659 0.77166 0.00047791 619.330466111902 628.341442469212 28.995 0.16503 28.995 28.883 29.048 0 28 7 6 0 0 0 0.013691 1 13906 51.276 31.49 1 2.4507 2.7224 0 19545000 6113100 13432000 29313 1013 11109 11412 45753 45753 RDIQENDEEAVQVK 14 1 1 Unmodified _RDIQENDEEAVQVK_ 0 0 1 O00231;J3QRY4;B4DTS5 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.9225 2 836.910473 1671.80639 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.541 1 28.541 28.041 29.041 -1.9073E-06 0 0 0 0.042542 1 13505 49.081 26.163 1 29314 1360 11110 11413 45754 45754 RDIQENDEEAVQVK 14 1 1 Unmodified _RDIQENDEEAVQVK_ 0 0 1 O00231;J3QRY4;B4DTS5 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.9212 2 836.910473 1671.80639 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.598 1 28.598 28.098 29.098 1.9073E-06 0 0 0 0.0055154 1 13552 70.488 50.185 1 29315 1360 11110 11413 45755 45755 RDIQENDEEAVQVK 14 1 1 Unmodified _RDIQENDEEAVQVK_ 0 0 1 O00231;J3QRY4;B4DTS5 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.9227 2 836.910473 1671.80639 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.746 1 27.746 27.246 28.246 0 0 0 0 0.0091287 1 13010 59.57 39.266 1 29316 1360 11110 11413 45756 45756 RDISSSLNSLADSNAR 16 0 2 Unmodified _RDISSSLNSLADSNAR_ 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.9591 3 569.286973 1704.83909 79843.8 0.50325 0.00028649 0.46194 0.00026298 0.96519 0.00054947 569.621245075818 575.959329989929 67.51 0.3829 67.51 67.331 67.713 0 98 29 5 0 0 0 0.00072176 2 35116 33.872 33.872 1 1.6063 1.4604 0 2612200 1217400 1394900 29317 168 11111 11414 45757;45758 45757 RDISSSLNSLADSNAR 16 0 2 Unmodified _RDISSSLNSLADSNAR_ 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.9594 3 569.286973 1704.83909 80885.2 0.37877 0.00021563 0.20056 0.00011418 0.57933 0.00032981 569.621448265764 575.95937149335 68.038 0.38108 68.038 67.862 68.243 0 120 29 6 0 0 0 0.00080428 3 34662 28.112 28.112 1 1.845 1.6505 0 2203100 988960 1214100 29318 168 11111 11414 45759;45760;45761 45759 RDIVEELSALK 11 1 1 Unmodified _RDIVEELSALK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.8732 2 636.861534 1271.70852 75386.84 0.47208 0.00030065 -0.1943 -0.00012374 0.27779 0.00017691 636.861380613783 645.8726617478 89.628 1.2073 89.628 89.174 90.381 0 471 101 7 0 0 0 0.00031741 3 54397 93.258 42.329 1 1.7206 2.0785 0 168530000 58042000 110480000 29319 1569 11112 11415 45762;45763;45764 45764 RDIVEELSALK 11 1 1 Unmodified _RDIVEELSALK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.8728 2 636.861534 1271.70852 74868.7 0.77143 0.00049129 -0.20764 -0.00013224 0.56379 0.00035906 636.861329492323 645.872664656676 87.977 0.93366 87.977 87.607 88.54 0 376 78 8 0 0 0 0.00067976 2 54176 81.017 34.125 1 1.6454 1.9511 0 267080000 97132000 169950000 29320 1569 11112 11415 45765;45766 45766 RDIVEELSALK 11 1 1 Unmodified _RDIVEELSALK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.8734 2 636.861534 1271.70852 74770.52 0.49931 0.00031799 0.26646 0.0001697 0.76577 0.00048769 636.861652087119 645.87296587906 101.69 1.0497 101.69 101.14 102.19 0 329 72 8 0 0 0 0.00056349 2 57530 86.463 46.916 1 3.2637 2.8577 0 27099000 6646800 20453000 29321 1569 11112 11415 45767;45768 45768 RDIVEELSALK 11 1 1 Unmodified _RDIVEELSALK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8617 2 636.861534 1271.70852 75110.58 0.52457 0.00033408 0.2595 0.00016526 0.78407 0.00049934 636.861525288497 645.872921322941 101.47 1.0731 101.47 100.86 101.93 0 281 65 7 0 0 0 0.028255 2 56456 45.598 16.902 1 3.2087 2.7248 0 24225000 5794400 18431000 29322 1569 11112 11415 45769;45770 45769 RDLALVNDQLLGFVR 15 0 2 Unmodified _RDLALVNDQLLGFVR_ 0 0 1 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3308 3 576.996694 1727.96825 NaN NaN NaN -0.1283 -7.4027E-05 NaN NaN NaN NaN 112.76 0.24533 112.76 112.59 112.83 7.6294E-06 0 0 0 0.045488 1 72992 25.365 18.636 1 NaN NaN 0 1535300 1535300 0 29323 1270 11113 11416 45771 45771 RDLGEELEALK 11 1 1 Unmodified _RDLGEELEALK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0 A0A024R1N1 A0A024R1N1 MYH9;MYH11 Myosin-9;Myosin-11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.8555 2 636.843342 1271.67213 77427.63 0.72777 0.00046347 -0.28357 -0.00018059 0.4442 0.00028289 636.8428964505 645.854497176683 73.687 0.83374 73.687 73.269 74.103 7.6294E-06 347 77 7 0 0 0 0.00095218 2 43050 74.162 27.271 1 1.6343 1.9391 0 42963000 18455000 24508000 29324 81 11114 11417 45772;45773 45772 RDLGEELEALK 11 1 1 Unmodified _RDLGEELEALK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;Q7Z7R0 A0A024R1N1 A0A024R1N1 MYH9;MYH11 Myosin-9;Myosin-11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.8541 2 636.843342 1271.67213 75132.55 0.54257 0.00034553 -0.15673 -9.9814E-05 0.38584 0.00024572 636.842912060659 645.854515255815 71.656 0.89254 71.656 71.3 72.192 0 264 73 5 0 0 0 0.00073321 2 42868 78.513 41.037 1 1.678 1.9678 0 57246000 20257000 36989000 29325 81 11114 11417 45774;45775 45774 RDLIDNSFNR 10 0 2 Unmodified _RDLIDNSFNR_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3262 2 625.317825 1248.6211 78418.95 1.7199 0.0010755 -0.79456 -0.00049685 0.92535 0.00057864 625.317152618357 635.325712531913 43.859 0.49538 43.859 43.635 44.13 0 99 41 4 0 0 0 0.0045832 1 23814 67.726 46.824 1 0.99176 1.1083 0 26106000 12552000 13554000 29326 1898 11115 11418 45776 45776 RDLPNALDEK 10 1 1 Unmodified _RDLPNALDEK_ 0 0 1 B4DQT8;A0A024R2D4;B4E1J8;Q9NVJ2 B4DQT8 B4DQT8 ARL8B ADP-ribosylation factor-like protein 8B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.8206 2 585.809302 1169.60405 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.073 1 32.073 31.573 32.573 0 0 0 0 0.00019975 1 15941 84.658 33.313 1 29327 109 11116 11419 45777 45777 RDNYVPEVSALDQEIIEVDPDTK 23 1 1 Unmodified _RDNYVPEVSALDQEIIEVDPDTK_ 0 0 1 H0YN88;A0A075B716;P08708 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 882.7715 3 882.436212 2644.28681 64855.61 0.67662 0.00059707 0.37388 0.00032992 1.0505 0.000927 882.770834477703 888.778582104489 124.4 0.94046 124.4 124.1 125.04 7.6294E-06 188 40 7 0 0 0 2.841E-08 1 74486 55.061 55.061 1 0.74913 0.63009 0 7224900 4147300 3077600 29328 396 11117 11420 45778 45778 RDNYVPEVSALDQEIIEVDPDTK 23 1 1 Unmodified _RDNYVPEVSALDQEIIEVDPDTK_ 0 0 1 H0YN88;A0A075B716;P08708 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 882.7706 3 882.436212 2644.28681 64854.34 0.38444 0.00033924 0.49562 0.00043735 0.88006 0.0007766 882.771163432093 888.778382912428 124.18 0.85859 124.18 123.93 124.79 0 167 35 9 0 0 0 0.054761 1 73490 6.7232 6.7232 1 0.71822 0.60406 0 7420800 4046200 3374600 29329 396 11117 11420 45779 45779 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 890.4724 2 890.471032 1778.92751 64587.21 0.21219 0.00018895 0.23253 0.00020706 0.44472 0.00039601 890.471368701137 903.990813135909 21.853 0.16304 21.853 21.73 21.893 0 42 9 5 0 0 0 0.00027614 1 8029 92.939 92.939 1 0.68907 0.82247 0 105290000 66914000 38381000 29330 1471 11118 11421 45780 45780 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.488 2 890.471032 1778.92751 64062.69 0.036912 3.2869E-05 0.41201 0.00036689 0.44893 0.00039976 890.471318810839 903.489868123616 21.942 0.50247 21.942 21.73 22.233 0 125 28 9 0 0 0 0.00019643 1 8031 98.592 98.592 1 0.50371 0.60123 0 123950000 55245000 68710000 29331 1471 11118 11421 45781 45781 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.9843 3 593.983113 1778.92751 77297.88 0.13198 7.8395E-05 0.26174 0.00015547 0.39372 0.00023386 593.98352303149 602.662155920554 21.941 1.1834 21.941 21.704 22.887 1.9073E-06 415 71 12 0 0 0 1.3204E-18 2 8038 135.95 135.95 1 0.68134 0.81325 0 772180000 463860000 308320000 29332 1471 11118 11421 45782;45783 45782 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.99 4 445.739154 1778.92751 89097.88 -0.46728 -0.00020828 0.37495 0.00016713 -0.092331 -4.1155E-05 445.990035673821 452.248495087825 21.939 0.46547 21.939 21.676 22.141 0 160 27 9 0 0 0 1.4346E-05 1 8095 81.854 81.854 1 0.66723 0.7964 0 53882000 33996000 19886000 29333 1471 11118 11421 45784 45784 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.489 2 890.471032 1778.92751 64663.27 0.45685 0.00040681 0.31899 0.00028405 0.77584 0.00069086 890.471413579893 903.489596776844 21.305 0.38838 21.305 21.127 21.516 0 123 17 9 0 0 0 9.4278E-06 2 7378 112.42 112.42 1 0.66626 0.8593 0 183370000 106360000 77011000 29334 1471 11118 11421 45785;45786 45785 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 445.7393 4 445.739154 1778.92751 88478.9 0.045242 2.0166E-05 -0.79998 -0.00035658 -0.75473 -0.00033641 445.739175562348 452.247300891376 21.285 0.4853 21.285 21.031 21.516 0 106 22 8 0 0 0 1.3963E-05 1 7424 82.01 82.01 1 0.99677 1.2856 0 65586000 32933000 32653000 29335 1471 11118 11421 45787 45787 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.9842 3 593.983113 1778.92751 NaN NaN NaN 1.5402 0.00091484 NaN NaN NaN NaN 21.35 1.0479 21.35 21.092 22.14 0 0 0 0 1.112E-106 1 7351 195.17 157.57 1 NaN NaN 0 573290000 573290000 0 29336 1471 11118 11421 45788 45788 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.6608 3 593.983113 1778.92751 NaN NaN NaN -1.8503 -0.001099 NaN NaN NaN NaN 21.317 0.99139 21.317 21.092 22.084 0 0 0 0 2.8279E-106 1 7411 207.43 177.29 1 NaN NaN 0 357710000 0 357710000 29337 1471 11118 11421 45789 45789 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.3187 3 593.983113 1778.92751 77004.33 0.46195 0.00027439 -0.10829 -6.4325E-05 0.35365 0.00021006 593.984085564821 602.662236852357 23.832 1.7941 23.832 23.62 25.414 0 593 96 12 0 0 0 5.1525E-05 1 8169 77.08 77.08 1 1.2483 1.2932 0 466950000 197980000 268970000 29338 1471 11118 11421 45790 45790 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.9839 3 593.983113 1778.92751 76713.39 0.45734 0.00027166 -0.17098 -0.00010156 0.28636 0.0001701 593.983920124977 602.662185328089 23.734 2.0961 23.734 23.485 25.581 1.9073E-06 595 115 10 0 0 0 2.853E-25 2 7601 144.25 144.25 1 1.2538 1.2206 0 446910000 195630000 251270000 29339 1471 11118 11421 45791;45792 45791 RDPVALEDVYPIHMILENK 19 1 1 Unmodified _RDPVALEDVYPIHMILENK_ 0 0 1 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.7398 3 751.396306 2251.16709 75873.84 0.92632 0.00069603 1.4219 0.0010684 2.3482 0.0017645 751.399258444278 757.738904586156 122.27 0.12721 122.27 122.18 122.31 0 13 5 5 0 0 0 0.055154 1 72941 8.4704 5.3265 1 1.8444 1.5378 0 3536900 1511900 2025100 29340 1699 11119 11422 45793 45793 RDQAVMISGESGAGK 15 1 1 Oxidation (M) _RDQAVM(ox)ISGESGAGK_ RDQAVM(1)ISGESGAGK RDQAVM(75.7)ISGESGAGK 0 1 1 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.3809 2 761.369929 1520.72531 NaN NaN NaN -0.34894 -0.00026567 NaN NaN NaN NaN 21.192 0.20706 21.192 21.075 21.282 1.9073E-06 0 0 0 0.00016364 1 7524 75.695 51.352 1 NaN NaN 0 1821300 0 1821300 29341 1088 11120 11423 45794 45794 832 RDQAVMISGESGAGK 15 1 1 Oxidation (M) _RDQAVM(ox)ISGESGAGK_ RDQAVM(1)ISGESGAGK RDQAVM(61.44)ISGESGAGK 0 1 1 F5H6E2;B7Z3E5;O00159;B7Z9C0;I3L204;I3L4D4;I3L501;I3L3Y6;I3L168;I3L3F5 F5H6E2 F5H6E2 MYO1C Unconventional myosin-Ic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.3823 2 761.369929 1520.72531 NaN NaN NaN 0.38747 0.00029501 NaN NaN NaN NaN 21.025 0.29873 21.025 20.829 21.127 0 0 0 0 0.0016772 1 7189 61.435 49.222 1 NaN NaN 0 3732500 0 3732500 29342 1088 11120 11423 45795 45795 832 RDQNYPGAIAIHHPNVAEK 19 1 1 Unmodified _RDQNYPGAIAIHHPNVAEK_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.7032 3 710.699488 2129.07663 NaN NaN NaN 0.25354 0.00018019 NaN NaN NaN NaN 42.675 0.31643 42.675 42.549 42.866 3.8147E-06 0 0 0 6.0579E-24 1 22671 120.71 111.45 1 NaN NaN 0 20593000 20593000 0 + 29343 1163 11121 11424 45796 45796 RDQNYPGAIAIHHPNVAEK 19 1 1 Unmodified _RDQNYPGAIAIHHPNVAEK_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.527 4 533.276435 2129.07663 NaN NaN NaN 0.31806 0.00016961 NaN NaN NaN NaN 38.331 1.0361 38.331 37.985 39.021 3.8147E-06 0 0 0 1.1686E-13 2 20286 80.236 66.534 1 NaN NaN 0 190690000 190690000 0 + 29344 1163 11121 11424 45797;45798 45798 RDQNYPGAIAIHHPNVAEK 19 1 1 Unmodified _RDQNYPGAIAIHHPNVAEK_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.0343 3 710.699488 2129.07663 NaN NaN NaN 0.055924 3.9745E-05 NaN NaN NaN NaN 38.322 0.18344 38.322 38.213 38.396 0 0 0 0 0.00011786 1 20046 55.745 47.753 1 NaN NaN 0 39235000 39235000 0 + 29345 1163 11121 11424 45799 45799 RDQNYPGAIAIHHPNVAEK 19 1 1 Unmodified _RDQNYPGAIAIHHPNVAEK_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.5269 4 533.276435 2129.07663 NaN NaN NaN -0.55186 -0.00029429 NaN NaN NaN NaN 45.841 0.60995 45.841 45.639 46.249 0 0 0 0 0.029182 1 21460 16.096 12.656 1 NaN NaN 0 2150500 2150500 0 + 29346 1163 11121 11424 45800 45800 RDTLALLQK 9 1 1 Unmodified _RDTLALLQK_ 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.3218 2 529.321848 1056.62914 82599.2 0.34992 0.00018522 -0.07172 -3.7963E-05 0.2782 0.00014726 529.321820244629 538.332888900347 48.838 0.68413 48.838 48.543 49.227 3.8147E-06 299 55 8 0 0 0 0.003083 2 27341 80.165 19.576 1 0.66549 0.79247 0 523960000 304960000 219000000 29347 2037 11122 11425 45801;45802 45802 RDTLALLQK 9 1 1 Unmodified _RDTLALLQK_ 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.3218 2 529.321848 1056.62914 81983.47 0.47335 0.00025055 -0.18813 -9.9583E-05 0.28521 0.00015097 529.321742955006 538.332878959693 57.666 0.89212 57.666 57.375 58.267 0 328 66 8 0 0 0 0.0063378 2 29247 70.919 10.329 1 0.43129 0.38263 0 52437000 35615000 16822000 29348 2037 11122 11425 45803;45804 45804 RDTLALLQK 9 1 1 Unmodified _RDTLALLQK_ 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.3218 2 529.321848 1056.62914 82355.97 0.46609 0.00024671 -0.26541 -0.00014049 0.20068 0.00010622 529.321678759219 538.332814737868 57.708 0.97923 57.708 57.383 58.362 0 377 70 9 0 0 0 0.0035126 1 28548 76.827 16.237 1 0.46704 0.39777 0 44183000 30237000 13946000 29349 2037 11122 11425 45805 45805 REAPEELLAYEGVR 14 0 2 Unmodified _REAPEELLAYEGVR_ 0 0 1 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.6183 3 544.617771 1630.83148 82652.59 0.64642 0.00035205 0.56542 0.00030794 1.2118 0.00065999 544.617987095738 551.290651383187 88.21 0.43386 88.21 88.023 88.457 -7.6294E-06 88 26 5 0 0 0 0.043362 1 48650 16.88 11.989 1 1.2158 1.1139 0 1476700 721160 755530 29350 1698 11123 11426 45806 45806 REAPEELLAYEGVR 14 0 2 Unmodified _REAPEELLAYEGVR_ 0 0 1 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.6183 3 544.617771 1630.83148 82983.38 0.4764 0.00025945 1.0016 0.00054548 1.478 0.00080494 544.618049410121 551.290867520349 88.147 0.47086 88.147 87.978 88.448 -7.6294E-06 67 25 5 0 0 0 0.026427 1 47740 21.093 16.202 1 1.4084 1.259 0 1275300 493560 781730 29351 1698 11123 11426 45807 45807 REATADDLIK 10 1 1 Unmodified _REATADDLIK_ 0 0 1 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.3035 2 566.303852 1130.59315 81694.85 0.55579 0.00031474 0.30393 0.00017211 0.85971 0.00048686 566.303744380921 575.315502510359 30.579 0.81831 30.579 30.26 31.079 0 284 72 6 0 0 0 0.0011031 1 14866 83.309 38.227 1 0.58202 0.69933 0 73211000 45979000 27231000 29352 1770 11124 11427 45808 45808 REATADDLIK 10 1 1 Unmodified _REATADDLIK_ 0 0 1 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.3066 2 566.303852 1130.59315 NaN NaN NaN 1.3035 0.00073819 NaN NaN NaN NaN 29.721 0.60737 29.721 29.57 30.177 0 0 0 0 1.5635E-07 1 14343 105.98 41.711 1 NaN NaN 0 100130000 100130000 0 29353 1770 11124 11427 45809 45809 REDLVVAPAGITLK 14 1 1 Unmodified _REDLVVAPAGITLK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.4496 2 741.437941 1480.86133 70819.55 0.55786 0.00041362 0.21874 0.00016218 0.7766 0.0005758 741.437937641036 750.449220919514 88.356 0.88025 88.356 88.032 88.912 7.6294E-06 319 66 6 0 0 0 2.4693E-06 2 53244 115.8 115.8 1 1.2897 1.5548 0 123310000 53893000 69420000 29354 1282 11125 11428 45810;45811 45811 REDLVVAPAGITLK 14 1 1 Unmodified _REDLVVAPAGITLK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.6376 3 494.627719 1480.86133 84581.17 0.15437 7.6354E-05 -1.1733 -0.00058033 -1.0189 -0.00050397 494.961764530097 500.635225568794 88.464 0.89537 88.464 88.078 88.973 0 197 66 6 0 0 0 0.00035552 1 53170 53.828 48.287 1 1.2192 1.4644 0 69058000 33920000 35138000 29355 1282 11125 11428 45812 45812 REDLVVAPAGITLK 14 1 1 Unmodified _REDLVVAPAGITLK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.4378 2 741.437941 1480.86133 70995.41 0.37092 0.00027501 0.20747 0.00015382 0.57839 0.00042884 741.437973599574 750.44929600935 86.949 0.72491 86.949 86.531 87.256 7.6294E-06 282 62 6 0 0 0 1.0792E-09 2 53644 122.97 109 1 1.2573 1.4836 0 122540000 53916000 68625000 29356 1282 11125 11428 45813;45814 45814 REDLVVAPAGITLK 14 1 1 Unmodified _REDLVVAPAGITLK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.6357 3 494.627719 1480.86133 NaN NaN NaN -0.40837 -0.00020199 NaN NaN NaN NaN 86.888 0.59926 86.888 86.596 87.195 7.6294E-06 0 0 0 0.0067861 1 53518 42.314 23.256 1 NaN NaN 0 25717000 0 25717000 29357 1282 11125 11428 45815 45815 REDLVVAPAGITLK 14 1 1 Unmodified _REDLVVAPAGITLK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.449 2 741.437941 1480.86133 70723.07 0.51753 0.00038372 0.18037 0.00013373 0.69789 0.00051745 741.437851970421 750.449155439769 100.4 0.51505 100.4 100.14 100.65 -7.6294E-06 221 44 6 0 0 0 2.4189E-05 1 56777 106.32 106.32 1 1.2515 1.081 0 13687000 6519200 7167900 29358 1282 11125 11428 45816 45816 REDLVVAPAGITLK 14 1 1 Unmodified _REDLVVAPAGITLK_ 0 0 1 H0Y4R1;P12268;B7Z1G4;Q6QE17;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 750.9512 2 741.437941 1480.86133 70691.18 0.48204 0.0003574 0.32868 0.00024369 0.81072 0.0006011 741.437833396478 750.449524431327 100.05 0.58495 100.05 99.808 100.39 0 224 52 6 0 0 0 0.00046869 1 55670 69.345 69.345 1 1.4451 1.2245 0 15341000 6053100 9287500 29359 1282 11125 11428 45817 45817 REDSAPPSSVAR 12 0 2 Unmodified _REDSAPPSSVAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.3207 2 636.320565 1270.62658 75085.63 0.42624 0.00027122 0.31758 0.00020208 0.74382 0.00047331 636.320600218372 646.329020899329 17.286 0.60225 17.286 16.991 17.594 0 71 20 7 0 0 0 0.0090126 1 4433 51.092 30.19 1 1.1525 1.2501 0 27096000 12330000 14765000 29360 1183 11126 11429 45818 45818 REDSAPPSSVAR 12 0 2 Unmodified _REDSAPPSSVAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3212 2 636.320565 1270.62658 75649.48 0.85077 0.00054137 0.62212 0.00039586 1.4729 0.00093723 636.320849178336 646.329341828596 17.154 0.50079 17.154 16.985 17.486 0 64 15 6 0 0 0 0.00033867 2 4130 79.201 62.999 1 1.0464 1.07 0 11718000 5948000 5770400 29361 1183 11126 11429 45819;45820 45820 REEEEFNTGPLSVLTQSVK 19 1 1 Unmodified _REEEEFNTGPLSVLTQSVK_ 0 0 1 P62316;K7ERG4 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.0448 3 721.702452 2162.08553 71334.17 1.1186 0.00080726 0.18039 0.00013019 1.2989 0.00093745 721.702530746603 727.710142036596 108.66 0.96564 108.66 108.2 109.17 -7.6294E-06 431 65 9 0 0 0 9.3613E-05 2 67672 42.639 42.639 1 0.9521 1.133 0 46987000 25890000 21097000 29362 1645 11127 11430 45821;45822 45822 REEEEFNTGPLSVLTQSVK 19 1 1 Unmodified _REEEEFNTGPLSVLTQSVK_ 0 0 1 P62316;K7ERG4 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.71 3 721.702452 2162.08553 71507.38 0.78301 0.0005651 -0.13222 -9.542E-05 0.65079 0.00046968 722.036712878867 727.709970910802 107.57 0.87757 107.57 107.19 108.07 7.6294E-06 396 62 9 0 0 0 1.5156E-08 2 68548 88.176 88.176 1 0.98333 1.1485 0 48240000 22991000 25249000 29363 1645 11127 11430 45823;45824 45823 REEEEFNTGPLSVLTQSVK 19 1 1 Unmodified _REEEEFNTGPLSVLTQSVK_ 0 0 1 P62316;K7ERG4 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.0372 3 721.702452 2162.08553 71825.11 0.90879 0.00065588 -0.13528 -9.7631E-05 0.77351 0.00055825 722.036531329614 727.709721567706 118.88 0.83649 118.88 118.45 119.29 -7.6294E-06 209 40 9 0 0 0 0.0021741 2 70215 27.739 24.548 1 0.65075 0.54971 0 7907700 4862100 3045500 29364 1645 11127 11430 45825;45826 45825 REEEEFNTGPLSVLTQSVK 19 1 1 Unmodified _REEEEFNTGPLSVLTQSVK_ 0 0 1 P62316;K7ERG4 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.0377 3 721.702452 2162.08553 71618.83 0.91129 0.00065768 -0.39952 -0.00028834 0.51177 0.00036934 722.036201755693 728.044076733129 118.58 0.81594 118.58 118.27 119.09 0 200 38 9 0 0 0 4.7637E-05 1 69134 46.461 46.461 1 0.6808 0.57352 0 8134100 4806600 3327500 29365 1645 11127 11430 45827 45827 REEEEQQEGGFASPR 15 0 2 Unmodified _REEEEQQEGGFASPR_ 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.5998 3 583.599328 1747.77615 79204 0.2787 0.00016265 0.3349 0.00019545 0.61361 0.0003581 583.599315311184 590.271390203064 23.378 0.43049 23.378 23.126 23.556 0 92 20 7 0 0 0 1.5281E-07 2 9305 92.8 92.8 1 0.57501 0.62118 0 19489000 12665000 6824200 29366 406 11128 11431 45828;45829 45829 REEEEQQEGGFASPR 15 0 2 Unmodified _REEEEQQEGGFASPR_ 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.2723 3 583.599328 1747.77615 79557.86 0.20483 0.00011954 0.091117 5.3176E-05 0.29595 0.00017272 583.933713307791 590.271830035751 22.954 0.36299 22.954 22.77 23.133 0 66 15 7 0 0 0 3.6267E-06 2 8909 85.988 85.988 1 0.70272 0.77814 0 23029000 14746000 8283700 29367 406 11128 11431 45830;45831 45831 REEEEQQEGGFASPR 15 0 2 Unmodified _REEEEQQEGGFASPR_ 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.8972 2 874.895354 1747.77615 66224.74 0.11832 0.00010352 0.27574 0.00024124 0.39406 0.00034476 874.895249068473 884.904077360754 22.949 0.28606 22.949 22.823 23.109 0 42 11 7 0 0 0 0.0083478 1 8851 37.681 37.681 1 0.49413 0.53197 0 16378000 10698000 5680700 29368 406 11128 11431 45832 45832 REEEEQQEGGFASPR 15 0 2 Unmodified _REEEEQQEGGFASPR_ 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.5996 3 583.599328 1747.77615 80179.88 0.31266 0.00018247 0.15211 8.877E-05 0.46477 0.00027124 583.599270196738 590.271931428574 25.921 0.35531 25.921 25.737 26.093 0 61 14 6 0 0 0 5.5664E-05 1 9630 52.172 52.172 1 0.61385 0.55231 0 3404000 2154900 1249200 29369 406 11128 11431 45833 45833 REEEEQQEGGFASPR 15 0 2 Unmodified _REEEEQQEGGFASPR_ 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.9344 3 583.599328 1747.77615 80092.58 0.42659 0.00024896 0.36212 0.00021133 0.78871 0.00046029 583.599491755712 590.27182534125 25.976 0.35092 25.976 25.796 26.147 0 62 14 7 0 0 0 0.00017098 1 9148 41.348 41.348 1 0.69028 0.61682 0 2132500 1376900 755610 29370 406 11128 11431 45834 45834 REEETLDTIK 10 1 1 Unmodified _REEETLDTIK_ 0 0 1 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24;Q9HBZ9;Q7Z4W5 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.3322 2 617.319699 1232.62485 74844.78 0.65976 0.00040729 0.51978 0.00032087 1.1795 0.00072816 617.31935599435 626.331180504264 28.942 0.32705 28.942 28.759 29.086 1.9073E-06 72 14 8 0 0 0 2.096E-05 1 13829 103.34 61.233 1 2.6521 3.1811 0 59927000 16062000 43866000 29371 593 11129 11432 45835 45835 REEFVSIK 8 1 1 Unmodified _REEFVSIK_ 0 0 1 A0A024RC67;O43663;H0YM42;B4E238 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.2909 2 504.279649 1006.54475 NaN NaN NaN 0.17108 8.6274E-05 NaN NaN NaN NaN 37.73 0.61654 37.73 37.449 38.065 0 0 0 0 0.050655 1 19233 50.04 17.2 1 NaN NaN 0 13288000 0 13288000 29372 353 11130 11433 45836 45836 REELSNVLAAMR 12 0 2 Oxidation (M) _REELSNVLAAM(ox)R_ REELSNVLAAM(1)R REELSNVLAAM(40.29)R 0 1 1 Q9Y3U8 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.5859 3 468.913642 1403.7191 NaN NaN NaN -0.31636 -0.00014835 NaN NaN NaN NaN 49.65 0.54443 49.65 49.319 49.863 -3.8147E-06 0 0 0 0.0088656 1 28058 40.287 30.508 1 NaN NaN 0 16692000 0 16692000 29373 2140 11131 11434 45837 45837 1980 REEPMEEEEEPEQK 14 1 1 Oxidation (M) _REEPM(ox)EEEEEPEQK_ REEPM(1)EEEEEPEQK REEPM(48.82)EEEEEPEQK 0 1 1 P49756 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.2563 3 602.256239 1803.74689 80769.19 0.65826 0.00039644 -0.010084 -6.0729E-06 0.64818 0.00039037 602.59036578856 608.263715042888 16.095 0.28088 16.095 15.944 16.225 0 49 15 4 0 0 0 0.00083755 1 3551 48.823 48.823 1 1.3859 1.5938 0 1982200 776550 1205600 29374 1587 11132 11435 45838 45838 1368 REFEPASAR 9 0 2 Unmodified _REFEPASAR_ 0 0 1 B9A018;Q53GS9;F8WC91 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.7786 2 531.76998 1061.52541 88777.67 0.62076 0.0003301 0.79533 0.00042293 1.4161 0.00075303 531.770579641959 541.778383094365 19.254 0.28919 19.254 19.182 19.471 0 34 14 5 0 0 0 0.023551 1 5963 56.013 28.489 1 0.82369 0.89025 0 20249000 11176000 9072800 29375 1119 11133 11436 45839 45839 REFEPASAR 9 0 2 Unmodified _REFEPASAR_ 0 0 1 B9A018;Q53GS9;F8WC91 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.2717 2 531.76998 1061.52541 82876.24 0.10647 5.6617E-05 0.90306 0.00048022 1.0095 0.00053684 531.770641805674 541.778492905876 19.149 0.1816 19.149 19.07 19.252 0 25 6 6 0 0 0 0.0023667 1 5627 85.733 64.863 1 0.63066 0.71505 0 33051000 19028000 14023000 29376 1119 11133 11436 45840 45840 REFQDAPYNEVTGAPAQFEGTEQAPFLGSR 30 0 2 Unmodified _REFQDAPYNEVTGAPAQFEGTEQAPFLGSR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1111.8645 3 1104.85672 3311.54833 57911.97 0.54239 0.00059927 0.66234 0.00073179 1.2047 0.0013311 1105.19212863095 1111.86374017965 115.79 0.43162 115.79 115.64 116.07 7.6294E-06 100 17 12 0 0 0 0.00017858 4 67875 30.922 30.922 1 2.3785 2.0089 0 10024000 2669000 7355400 29377 2002 11134 11437 45841;45842;45843;45844 45842 REFQDAPYNEVTGAPAQFEGTEQAPFLGSR 30 0 2 Unmodified _REFQDAPYNEVTGAPAQFEGTEQAPFLGSR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1105.5262 3 1104.85672 3311.54833 57917.43 0.28948 0.00031983 -0.045997 -5.082E-05 0.24348 0.00026901 1105.19108695001 1111.86335188446 115.68 0.36644 115.68 115.5 115.86 7.6294E-06 118 16 11 0 0 0 0.00029022 3 66919 27.165 25.186 1 2.3156 2.1248 0 11832000 2455400 9377100 29378 2002 11134 11437 45845;45846;45847 45847 REGAGDAEADPLEPPPPQQQLGLSLR 26 0 2 Unmodified _REGAGDAEADPLEPPPPQQQLGLSLR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.1392 3 914.466617 2740.37802 63583.55 0.66824 0.00061109 0.11073 0.00010126 0.77897 0.00071234 914.800315992501 921.47365351496 96.439 0.74976 96.439 96.064 96.813 0 307 65 7 0 0 0 2.3319E-06 2 60110 40.756 40.756 1 0.60791 0.68832 0 31363000 19476000 11888000 29379 2002 11135 11438 45848;45849 45848 REGAGDAEADPLEPPPPQQQLGLSLR 26 0 2 Unmodified _REGAGDAEADPLEPPPPQQQLGLSLR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 921.14 3 914.466617 2740.37802 62862.38 0.60244 0.00055091 -0.15955 -0.0001459 0.44289 0.00040501 914.800881177289 921.473065405258 109.72 0.6698 109.72 109.43 110.1 0 265 33 12 0 0 0 0.0082166 3 63136 21.453 21.453 1 1.3031 1.0647 0 35745000 15878000 19868000 29380 2002 11135 11438 45850;45851;45852 45850 REGAGDAEADPLEPPPPQQQLGLSLR 26 0 2 Unmodified _REGAGDAEADPLEPPPPQQQLGLSLR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 921.4739 3 914.466617 2740.37802 63620.12 0.5989 0.00054767 -0.13504 -0.00012349 0.46386 0.00042419 914.800710829251 921.473098144341 109.61 0.68211 109.61 109.32 110 0 245 33 12 0 0 0 0.0057065 3 62131 22.407 21.293 1 1.269 1.1783 0 25599000 10674000 14925000 29381 2002 11135 11438 45853;45854;45855 45853 REGLGLDVER 10 0 2 Unmodified _REGLGLDVER_ 0 0 1 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.3187 2 572.309469 1142.60439 79320.16 0.64138 0.00036707 -0.43404 -0.0002484 0.20734 0.00011866 572.308750177896 582.317633910081 41.794 0.51764 41.794 41.532 42.049 0 109 45 4 0 0 0 0.019152 2 22467 51.998 12.209 1 0.72793 0.79245 0 18242000 8897700 9343800 29382 655 11136 11439 45856;45857 45856 RELDSITPEVLPGWK 15 1 1 Unmodified _RELDSITPEVLPGWK_ 0 0 1 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.9833 3 580.649071 1738.92539 82033.48 0.62845 0.00036491 0.29983 0.0001741 0.92828 0.00053901 580.983409134797 586.991129051436 102.35 0.69014 102.35 102.05 102.74 7.6294E-06 112 55 4 0 0 0 0.0039849 2 63153 32.815 32.815 1 0.70856 0.79494 0 6574700 2812100 3762600 29383 1774;1029;1128 11137 11440 45858;45859 45859 RELDSITPEVLPGWK 15 1 1 Unmodified _RELDSITPEVLPGWK_ 0 0 1 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.6501 3 580.649071 1738.92539 80568.68 0.60675 0.00035231 0.53938 0.00031319 1.1461 0.0006655 580.649291293294 586.657133654831 101.1 0.66929 101.1 100.72 101.39 0 108 52 5 0 0 0 0.0012413 2 63511 37.77 37.77 1 0.76179 0.859 0 14385000 5577800 8807700 29384 1774;1029;1128 11137 11440 45860;45861 45860 RELEIESQTEEQPTTK 16 1 1 Unmodified _RELEIESQTEEQPTTK_ 0 0 1 B3KQ21;Q9NYH9;B3KX32;B4DSL9 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.9945 3 639.984848 1916.93271 76292.64 0.78969 0.00050539 0.13773 8.8146E-05 0.92742 0.00059353 640.319704057792 645.992839463398 35.775 0.36626 35.775 35.531 35.897 -3.8147E-06 171 35 7 0 0 0 5.3657E-05 2 17954 55.851 51.033 1 0.84793 0.95915 0 23287000 12413000 10874000 29385 925 11138 11441 45862;45863 45862 RELEIESQTEEQPTTK 16 1 1 Unmodified _RELEIESQTEEQPTTK_ 0 0 1 B3KQ21;Q9NYH9;B3KX32;B4DSL9 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3188 3 639.984848 1916.93271 75255.84 0.85205 0.0005453 0.12986 8.3107E-05 0.98191 0.00062841 640.31951590847 645.992689025237 34.579 0.40772 34.579 34.376 34.784 0 145 34 7 0 0 0 3.8651E-05 2 17469 69.805 65.634 1 0.85305 0.9827 0 27997000 14611000 13386000 29386 925 11138 11441 45864;45865 45865 RELEIESQTEEQPTTK 16 1 1 Unmodified _RELEIESQTEEQPTTK_ 0 0 1 B3KQ21;Q9NYH9;B3KX32;B4DSL9 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 968.4875 2 959.473634 1916.93271 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.531 1 34.531 34.031 35.031 0 0 0 0 0.010237 1 17497 54.343 40.68 1 29387 925 11138 11441 45866 45866 RELEIESQTEEQPTTK 16 1 1 Unmodified _RELEIESQTEEQPTTK_ 0 0 1 B3KQ21;Q9NYH9;B3KX32;B4DSL9 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.3268 3 639.984848 1916.93271 75864.18 0.46972 0.00030061 0.027912 1.7864E-05 0.49763 0.00031848 639.984757256553 645.992351805765 41.203 0.47295 41.203 40.99 41.462 -3.8147E-06 233 34 10 0 0 0 0.00082446 2 19031 31.883 28.042 1 1.6043 1.3543 0 7798400 2984000 4814300 29388 925 11138 11441 45867;45868 45867 RELEIESQTEEQPTTK 16 1 1 Unmodified _RELEIESQTEEQPTTK_ 0 0 1 B3KQ21;Q9NYH9;B3KX32;B4DSL9 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.9931 3 639.984848 1916.93271 75324.62 0.32177 0.00020593 0.23635 0.00015126 0.55812 0.00035719 639.984942478325 645.992462688416 41.354 0.50342 41.354 41.138 41.641 0 209 38 8 0 0 0 0.00021904 3 18574 33.083 33.083 1 1.4357 1.2036 0 6213100 2478300 3734800 29389 925 11138 11441 45869;45870;45871 45870 RENPLLPEEEEQR 13 0 2 Unmodified _RENPLLPEEEEQR_ 0 0 1 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.2736 3 546.940914 1637.80091 80931.98 0.55312 0.00030253 1.4282 0.00078116 1.9814 0.0010837 547.278257783257 553.613305165459 41.94 0.59271 41.94 41.665 42.258 0 119 54 4 0 0 0 0.023815 1 22607 22.911 22.911 1 1.6128 1.7691 0 20223000 8252300 11971000 29390 1054 11139 11442 45872 45872 REPFLLSGGDDGALK 15 1 1 Unmodified _REPFLLSGGDDGALK_ 0 0 1 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6;B4DTI1 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.9521 3 525.610617 1573.81002 81869.97 0.28288 0.00014869 0.056653 2.9778E-05 0.33954 0.00017846 525.610615027221 531.618180440134 77.832 0.76517 77.832 77.424 78.189 0 226 59 5 0 0 0 0.0036644 1 46020 33.308 33.308 1 0.84186 0.93751 0 20018000 10544000 9474200 29391 1922 11140 11443 45873 45873 REPFLLSGGDDGALK 15 1 1 Unmodified _REPFLLSGGDDGALK_ 0 0 1 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6;B4DTI1 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.9123 2 787.912287 1573.81002 71125.92 0.4509 0.00035527 0.19465 0.00015337 0.64555 0.00050864 788.413509397211 796.92389721167 77.833 0.4897 77.833 77.577 78.067 0 81 36 5 0 0 0 0.0097509 1 46046 43.761 43.761 1 0.88176 0.99445 0 6015000 3010100 3005000 29392 1922 11140 11443 45874 45874 REPFLLSGGDDGALK 15 1 1 Unmodified _REPFLLSGGDDGALK_ 0 0 1 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6;B4DTI1 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.9249 2 787.912287 1573.81002 69587.74 0.47201 0.0003719 0.44723 0.00035238 0.91924 0.00072428 787.912922345146 796.923896742759 75.909 0.62254 75.909 75.75 76.372 0 158 56 4 0 0 0 0.0010535 1 45725 66.262 66.262 1 0.65865 0.7589 0 28199000 13863000 14335000 29393 1922 11140 11443 45875 45875 REPFLLSGGDDGALK 15 1 1 Unmodified _REPFLLSGGDDGALK_ 0 0 1 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6;B4DTI1 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.618 3 525.610617 1573.81002 82289.52 0.15156 7.9663E-05 0.31402 0.00016505 0.46558 0.00024472 525.610788366892 531.618037195151 75.911 0.79276 75.911 75.679 76.471 0 287 71 6 0 0 0 0.00017888 1 45769 51.591 40.152 1 0.79444 0.92809 0 48784000 30186000 18599000 29394 1922 11140 11443 45876 45876 REPFLLSGGDDGALK 15 1 1 Unmodified _REPFLLSGGDDGALK_ 0 0 1 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6;B4DTI1 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.611 3 525.610617 1573.81002 83455.16 0.37293 0.00019601 0.25919 0.00013623 0.63212 0.00033225 525.610933325871 531.617915349232 88.038 0.79382 88.038 87.733 88.527 0 189 48 6 0 0 0 0.029561 2 48533 19.262 19.262 1 0.66639 0.5508 0 5492700 2968400 2524300 29395 1922 11140 11443 45877;45878 45878 REPFLLSGGDDGALK 15 1 1 Unmodified _REPFLLSGGDDGALK_ 0 0 1 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6;B4DTI1 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.6181 3 525.610617 1573.81002 83456.28 0.35098 0.00018448 -0.0072495 -3.8104E-06 0.34373 0.00018067 525.610813283471 531.617908710411 87.86 0.70337 87.86 87.631 88.334 0 191 40 7 0 0 0 0.024028 1 47473 20.65 20.65 1 0.72836 0.61322 0 4222300 2187300 2035000 29396 1922 11140 11443 45879 45879 REPLPSR 7 0 2 Unmodified _REPLPSR_ 0 0 1 H0Y6E7;H3BT71;P38159;B4E352;Q2VIN3;Q96E39;B3KRG5;H3BUY5;F1T0J8;Q8IZ40 H0Y6E7 H0Y6E7 RBMX;RBMXL1;RCOR2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;REST corepressor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.7458 2 427.745776 853.477 89239.27 -0.19396 -8.2964E-05 0.28643 0.00012252 0.092471 3.9554E-05 427.745814701502 437.754132818012 17.793 0.43334 17.793 17.617 18.051 0 64 18 8 0 0 0 0.017989 1 4895 110.31 45.506 1 1.2165 1.3277 0 167910000 74976000 92933000 29397 1284 11141 11444 45880 45880 REPLSLINVR 10 0 2 Unmodified _REPLSLINVR_ 0 0 1 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 406.2469 3 399.575178 1195.70371 NaN NaN NaN 0.35803 0.00014306 NaN NaN NaN NaN 69.669 0.25053 69.669 69.569 69.819 0 0 0 0 0.013221 1 41558 46.796 28.9 1 NaN NaN 0 4601600 0 4601600 29398 1972 11142 11445 45881 45881 REPLSLINVR 10 0 2 Unmodified _REPLSLINVR_ 0 0 1 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 406.2468 3 399.575178 1195.70371 NaN NaN NaN 0.03273 1.3078E-05 NaN NaN NaN NaN 80.468 0.201 80.468 80.382 80.583 0 0 0 0 0.043721 1 43496 31.348 28.235 1 NaN NaN 0 903950 0 903950 29399 1972 11142 11445 45882 45882 REPTVSSFYVK 11 1 1 Unmodified _REPTVSSFYVK_ 0 0 1 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.8488 2 656.848427 1311.6823 75727.96 0.53553 0.00035176 0.091116 5.9849E-05 0.62665 0.00041161 656.848382772221 665.859559150018 52.629 0.58105 52.629 52.334 52.915 -3.8147E-06 210 41 7 0 0 0 8.2963E-08 1 29254 117.52 100.98 1 0.86776 1.0289 0 42009000 20675000 21334000 29400 2007 11143 11446 45883 45883 REPTVSSFYVK 11 1 1 Unmodified _REPTVSSFYVK_ 0 0 1 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.8597 2 656.848427 1311.6823 74218.86 0.665 0.00043681 0.24273 0.00015944 0.90773 0.00059624 656.848546130229 665.859725022676 50.364 0.32293 50.364 50.156 50.479 0 157 31 7 0 0 0 0.00063071 1 28376 72.848 72.848 1 0.8212 0.96749 0 95473000 57824000 37649000 29401 2007 11143 11446 45884 45884 REPVPFPSGSAGPGPR 16 0 2 Unmodified _REPVPFPSGSAGPGPR_ 0 0 1 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.6146 3 536.614473 1606.82159 81495.05 0.638 0.00034236 -0.10268 -5.5101E-05 0.53532 0.00028726 536.614350106192 543.286612557921 53.657 0.77318 53.657 53.332 54.106 -3.8147E-06 265 61 7 0 0 0 0.00021286 3 29941 34.395 28.097 1 0.84927 0.92333 0 46951000 22512000 24440000 29402 2096 11144 11447 45885;45886;45887 45886 REPVPFPSGSAGPGPR 16 0 2 Unmodified _REPVPFPSGSAGPGPR_ 0 0 1 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.2875 3 536.614473 1606.82159 82386.94 0.66629 0.00035754 -0.053594 -2.8759E-05 0.61269 0.00032878 536.614389440147 543.286552776314 52.209 0.70333 52.209 51.908 52.611 3.8147E-06 297 52 9 0 0 0 0.00035503 2 29685 33.697 27.485 1 0.78596 0.90319 0 55864000 32750000 23114000 29403 2096 11144 11447 45888;45889 45889 REPVPFPSGSAGPGPR 16 0 2 Unmodified _REPVPFPSGSAGPGPR_ 0 0 1 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.2877 3 536.614473 1606.82159 81662.34 0.44401 0.00023826 -0.080193 -4.3033E-05 0.36382 0.00019523 536.614338295004 543.28658749998 62.278 0.62375 62.278 61.992 62.616 -3.8147E-06 269 48 7 0 0 0 0.017594 2 31861 16.685 16.685 1 1.544 1.3203 0 6229700 2486500 3743200 29404 2096 11144 11447 45890;45891 45890 REPVPFPSGSAGPGPR 16 0 2 Unmodified _REPVPFPSGSAGPGPR_ 0 0 1 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.6139 3 536.614473 1606.82159 83023.91 0.35196 0.00018887 -0.086713 -4.6532E-05 0.26525 0.00014234 536.614333096565 543.286580648859 62.577 0.5859 62.577 62.269 62.855 -3.8147E-06 221 41 7 0 0 0 0.013733 2 31440 16.306 16.011 1 1.452 1.3152 0 5112100 2086000 3026200 29405 2096 11144 11447 45892;45893 45893 REQEPTERPLK 11 1 2 Unmodified _REQEPTERPLK_ 0 0 2 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.9279 3 461.584402 1381.73138 88253.68 0.094505 4.3622E-05 -0.26973 -0.0001245 -0.17523 -8.0883E-05 461.584329577474 470.927761725878 17.065 0.33302 17.065 16.933 17.266 0 29 9 6 0 0 0 0.0039341 2 4273 48.568 48.568 1 0.58423 0.63495 0 12440000 7620300 4819200 29406 2002 11145 11448 45894;45895 45894 REQEPTERPLK 11 1 2 Unmodified _REQEPTERPLK_ 0 0 2 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.5843 3 461.584402 1381.73138 89275.48 0.074504 3.439E-05 -0.26305 -0.00012142 -0.18855 -8.703E-05 461.584280022113 470.927797196533 16.601 0.40417 16.601 16.484 16.888 0 61 16 7 0 0 0 0.00031709 1 3733 87.184 87.184 1 0.59371 0.66614 0 11851000 7137500 4713900 29407 2002 11145 11448 45896 45896 REQEVNILK 9 1 1 Unmodified _REQEVNILK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.8341 2 564.822212 1127.62987 81667.45 0.55211 0.00031184 -0.078102 -4.4114E-05 0.474 0.00026773 564.822128472365 573.833361497401 32.56 0.33183 32.56 32.432 32.764 0 110 28 6 0 0 0 0.038702 1 16160 48.794 13.356 1 2.0767 2.3176 0 20429000 6012000 14417000 29408 81 11146 11449 45897 45897 REQEVNILK 9 1 1 Unmodified _REQEVNILK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.8336 2 564.822212 1127.62987 80227.77 0.74682 0.00042182 -0.16481 -9.3086E-05 0.58201 0.00032873 564.822054632065 573.83336222648 33.729 0.97561 33.729 33.133 34.109 0 423 94 6 0 0 0 0.032736 1 16602 51.066 14.509 1 1.7782 2.1407 0 98353000 36413000 61940000 29409 81 11146 11449 45898 45898 REQEVNILK 9 1 1 Unmodified _REQEVNILK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.8337 2 564.822212 1127.62987 81425.95 0.94994 0.00053655 -0.035021 -1.9781E-05 0.91492 0.00051677 564.82207341795 573.833380694293 31.501 0.43542 31.501 31.366 31.802 0 208 39 8 0 0 0 0.00025756 2 15558 108.15 45.683 1 1.7984 2.1245 0 146390000 53689000 92698000 29410 81 11146 11449 45899;45900 45899 REQEVNILK 9 1 1 Unmodified _REQEVNILK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8223 2 564.822212 1127.62987 79009.95 0.69261 0.0003912 -0.46966 -0.00026528 0.22295 0.00012593 564.821999178025 573.833171733048 32.102 0.77208 32.102 31.705 32.478 0 283 72 5 0 0 0 0.0019821 3 16045 88.819 30.004 1 1.7029 1.9844 0 43880000 15257000 28623000 29411 81 11146 11449 45901;45902;45903 45903 REQEVNILK 9 1 1 Unmodified _REQEVNILK_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.8334 2 564.822212 1127.62987 81594.55 0.3435 0.00019402 -0.070835 -4.0009E-05 0.27266 0.00015401 564.821905367276 573.833389185657 37.109 1.1173 37.109 36.506 37.623 0 358 93 6 0 0 0 0.05391 1 16159 45.161 14.087 1 2.7398 2.2963 0 5379700 1432500 3947200 29412 81 11146 11449 45904 45904 REQITLPEQAK 11 1 1 Unmodified _REQITLPEQAK_ 0 0 1 O94888;C9JAT7 O94888 O94888 UBXN7 UBX domain-containing protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.8649 2 656.864608 1311.71466 76558.46 0.42795 0.00028111 0.25969 0.00017058 0.68764 0.00045169 656.864872566708 665.876062892512 37.288 0.27942 37.288 37.135 37.414 0 42 23 4 0 0 0 0.012286 1 19340 52.79 35.354 1 0.68893 0.77306 0 12744000 5904000 6840200 29413 1417 11147 11450 45905 45905 RESVELALK 9 1 1 Unmodified _RESVELALK_ 0 0 1 O43719;B4DRS4;Q5H919;Q5H918 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.8176 2 522.806031 1043.59751 NaN NaN NaN 0.39258 0.00020524 NaN NaN NaN NaN 40.376 0.3336 40.376 40.271 40.605 0 0 0 0 0.0086894 1 21545 67.993 25.884 1 NaN NaN 0 25871000 0 25871000 29414 1388 11148 11451 45906 45906 RESVLTATSILNNPIVK 17 1 1 Unmodified _RESVLTATSILNNPIVK_ 0 0 1 Q5BKZ1;A0A0A0MRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.0342 3 619.02643 1854.05746 78651.01 0.68255 0.00042252 -0.0011769 -7.2856E-07 0.68137 0.00042179 619.360212868439 625.368474103773 105.95 1.0098 105.95 105.38 106.39 0 279 73 6 0 0 0 1.6878E-05 2 65747 72.433 67.531 1 1.2688 1.3619 0 13721000 6601100 7119900 29415 1804 11149 11452 45907;45908 45908 RESVLTATSILNNPIVK 17 1 1 Unmodified _RESVLTATSILNNPIVK_ 0 0 1 Q5BKZ1;A0A0A0MRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.0341 3 619.02643 1854.05746 77064.09 0.64866 0.00040154 0.36127 0.00022364 1.0099 0.00062517 619.026540762313 625.034049902986 104.41 1.0283 104.41 103.87 104.9 0 294 82 5 0 0 0 9.9093E-06 1 66041 79.805 79.805 1 1.5015 1.7124 0 20215000 8465400 11750000 29416 1804 11149 11452 45909 45909 RESVLTATSILNNPIVK 17 1 1 Unmodified _RESVLTATSILNNPIVK_ 0 0 1 Q5BKZ1;A0A0A0MRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.3618 3 619.02643 1854.05746 77878.56 1.0368 0.00064183 0.76728 0.00047497 1.8041 0.0011168 619.361659166338 625.034001269029 115.68 0.34881 115.68 115.53 115.88 7.6294E-06 78 15 8 0 0 0 0.00033982 3 67821 41.422 41.422 1 0.81183 0.67915 0 6587000 3562700 3024300 29417 1804 11149 11452 45910;45911;45912 45910 RESVLTATSILNNPIVK 17 1 1 Unmodified _RESVLTATSILNNPIVK_ 0 0 1 Q5BKZ1;A0A0A0MRN4 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 619.0267 3 619.02643 1854.05746 76900.23 0.64443 0.00039892 1.116 0.00069086 1.7605 0.0010898 619.362341805926 625.03410050978 115.44 0.55976 115.44 115.26 115.82 0 75 26 6 0 0 0 3.0502E-05 1 66692 57.788 51.208 1 0.89139 0.7511 0 8236900 3958500 4278300 29418 1804 11149 11452 45913 45913 RETFVQAVSK 10 1 1 Unmodified _RETFVQAVSK_ 0 0 1 Q86XI2;B3KRQ2;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.8331 2 582.822212 1163.62987 80232.74 0.7459 0.00043473 -0.11436 -6.6652E-05 0.63154 0.00036808 582.821867642979 591.833387253561 31.548 0.6637 31.548 31.107 31.771 1.9073E-06 181 61 6 0 0 0 0.019845 1 15450 51.436 14.245 1 0.91827 1.0584 0 27822000 12472000 15351000 29419 1887 11150 11453 45914 45914 RETFVQAVSK 10 1 1 Unmodified _RETFVQAVSK_ 0 0 1 Q86XI2;B3KRQ2;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.8221 2 582.822212 1163.62987 80988.27 1.025 0.0005974 -0.85998 -0.00050121 0.16504 9.6187E-05 582.821786478826 591.832773112098 29.896 0.71249 29.896 29.603 30.315 0 211 55 6 0 0 0 0.007105 2 14732 61.78 19.932 1 0.87732 1.0155 0 33390000 17753000 15637000 29420 1887 11150 11453 45915;45916 45916 RETGVDLTK 9 1 1 Unmodified _RETGVDLTK_ 0 0 1 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.7797 2 509.780013 1017.54547 85414.82 0.36321 0.00018516 -0.19803 -0.00010095 0.16517 8.4202E-05 509.779865873822 518.791202850533 21.248 0.5521 21.248 20.912 21.465 0 60 26 5 0 0 0 0.0014687 1 7581 93.111 93.111 1 2.4217 2.9061 0 60769000 16253000 44516000 29421 1092 11151 11454 45917 45917 RETGVDLTK 9 1 1 Unmodified _RETGVDLTK_ 0 0 1 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.7811 2 509.780013 1017.54547 84205.24 0.21301 0.00010859 0.15811 8.0599E-05 0.37112 0.00018919 509.780165446507 518.791268096057 20.989 0.60401 20.989 20.665 21.269 0 93 26 5 0 0 0 0.0070693 1 7156 69.812 69.812 1 2.3798 2.7552 0 33651000 10167000 23485000 29422 1092 11151 11454 45918 45918 REVDDLGPEVGDIK 14 1 1 Unmodified _REVDDLGPEVGDIK_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.5986 3 514.598377 1540.7733 85100.44 0.37599 0.00019348 0.061994 3.1902E-05 0.43798 0.00022539 514.598374404326 520.60591513529 62.997 0.9923 62.997 62.524 63.516 -3.8147E-06 307 95 4 0 0 0 4.375E-05 2 36294 65.374 53.683 1 1.1895 1.3867 0 30993000 13581000 17412000 29423 1379 11152 11455 45919;45920 45919 REVDDLGPEVGDIK 14 1 1 Unmodified _REVDDLGPEVGDIK_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.4053 2 771.393927 1540.7733 NaN NaN NaN -0.36101 -0.00027848 NaN NaN NaN NaN 63.075 0.70863 63.075 62.698 63.407 0 0 0 0 0.00016455 1 36065 86.772 50.079 1 NaN NaN 0 11917000 0 11917000 29424 1379 11152 11455 45921 45921 REVDDLGPEVGDIK 14 1 1 Unmodified _REVDDLGPEVGDIK_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.406 2 771.393927 1540.7733 68865.6 0.61197 0.00047207 -0.068256 -5.2652E-05 0.54371 0.00041941 771.394113838511 780.405159258512 61.001 0.76381 61.001 60.663 61.427 3.8147E-06 209 72 4 0 0 0 0.0003288 1 35580 69.864 49.086 1 1.1233 1.2881 0 23630000 10634000 12996000 29425 1379 11152 11455 45922 45922 REVDDLGPEVGDIK 14 1 1 Unmodified _REVDDLGPEVGDIK_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.5982 3 514.598377 1540.7733 85140.54 0.35595 0.00018317 -0.34301 -0.00017651 0.012941 6.6597E-06 514.59825513133 520.605559037383 61.065 0.96719 61.065 60.55 61.517 3.8147E-06 370 87 5 0 0 0 0.00016998 3 35709 45.438 45.438 1 1.1831 1.3727 0 36512000 17026000 19486000 29426 1379 11152 11455 45923;45924;45925 45925 REVDDLGPEVGDIK 14 1 1 Unmodified _REVDDLGPEVGDIK_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.4044 2 771.393927 1540.7733 70073.59 0.48102 0.00037106 -0.065331 -5.0396E-05 0.41569 0.00032066 771.393615676167 780.404956666301 71.656 0.44679 71.656 71.361 71.808 0 133 32 6 0 0 0 0.027502 1 37687 34.96 29.115 1 1.1767 1.0007 0 2947900 1437800 1510000 29427 1379 11152 11455 45926 45926 REVDDLGPEVGDIK 14 1 1 Unmodified _REVDDLGPEVGDIK_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.6064 3 514.598377 1540.7733 84222.23 0.19208 9.8846E-05 -0.044021 -2.2653E-05 0.14806 7.6193E-05 514.598264782602 520.605766359275 71.623 0.61452 71.623 71.303 71.918 0 181 40 7 0 0 0 0.0018144 1 37762 31.876 31.876 1 1.2892 1.057 0 4645800 2003100 2642700 29428 1379 11152 11455 45927 45927 REVDDLGPEVGDIK 14 1 1 Unmodified _REVDDLGPEVGDIK_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.6063 3 514.598377 1540.7733 86414.59 -0.050998 -2.6243E-05 0.43474 0.00022372 0.38374 0.00019747 514.598303317757 520.606119945566 72.05 0.61198 72.05 71.676 72.288 7.6294E-06 174 45 7 0 0 0 0.00059426 2 37245 36.345 29.764 1 1.1524 0.96962 0 4373300 1985300 2388000 29429 1379 11152 11455 45928;45929 45929 RFADFTVYR 9 0 2 Unmodified _RFADFTVYR_ 0 0 1 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.8128 2 587.803823 1173.59309 78086.15 0.48306 0.00028394 -0.081171 -4.7713E-05 0.40189 0.00023623 587.803579454208 597.811888486383 74.502 1.1798 74.502 74.17 75.35 0 280 76 8 0 0 0 0.05391 1 38698 45.161 15.688 1 1.7755 1.6318 0 13148000 4865000 8283200 29430 2080 11153 11456 45930 45930 RFALEQQR 8 0 2 Unmodified _RFALEQQR_ 0 0 1 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.2967 2 524.28834 1046.56213 81994.48 0.73953 0.00038773 0.095819 5.0237E-05 0.83535 0.00043797 524.288382929171 534.296741990193 26.206 0.48479 26.206 26.004 26.489 0 115 29 7 0 0 0 0.011218 1 11659 86.136 68.1 1 0.91674 0.99818 0 77170000 40161000 37009000 29431 790 11154 11457 45931 45931 RFDDAVVQSDMK 12 1 1 Oxidation (M) _RFDDAVVQSDM(ox)K_ RFDDAVVQSDM(1)K RFDDAVVQSDM(93.35)K 0 1 1 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.8351 2 713.835191 1425.65583 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.955 1 29.955 29.455 30.455 0 0 0 0 2.0164E-05 1 14580 93.345 56.001 1 29432 1467;1248 11155 11458 45932 45932 956 RFDDAVVQSDMK 12 1 1 Oxidation (M) _RFDDAVVQSDM(ox)K_ RFDDAVVQSDM(1)K RFDDAVVQSDM(126.66)K 0 1 1 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.8465 2 713.835191 1425.65583 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.019 1 30.019 29.519 30.519 -1.9073E-06 0 0 0 1.3057E-16 1 14615 126.66 99.769 1 29433 1467;1248 11155 11458 45933 45933 956 RFDDAVVQSDMK 12 1 1 Oxidation (M) _RFDDAVVQSDM(ox)K_ RFDDAVVQSDM(1)K RFDDAVVQSDM(40.59)K 0 1 1 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.8369 2 713.835191 1425.65583 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.184 1 30.184 29.684 30.684 1.9073E-06 0 0 0 0.033595 1 14723 40.589 14.651 1 29434 1467;1248 11155 11458 45934 45934 956 RFDDAVVQSDMK 12 1 1 Oxidation (M) _RFDDAVVQSDM(ox)K_ RFDDAVVQSDM(1)K RFDDAVVQSDM(89.8)K 0 1 1 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.8364 2 713.835191 1425.65583 75169.67 0.3225 0.00023021 0.19043 0.00013594 0.51293 0.00036615 713.835167808424 722.846589185065 29.018 1.0318 29.018 28.571 29.603 1.9073E-06 270 87 6 0 0 0 0.0004665 4 14251 89.805 78.64 1 1.6971 1.9697 0 37039000 14186000 22853000 29435 1467;1248 11155 11458 45935;45936;45937;45938 45938 956 RFDDAVVQSDMK 12 1 1 Oxidation (M) _RFDDAVVQSDM(ox)K_ RFDDAVVQSDM(1)K RFDDAVVQSDM(48.53)K 0 1 1 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.2346 3 476.225886 1425.65583 101687.3 -0.23191 -0.00011044 1.2995 0.00061884 1.0676 0.0005084 476.560578769787 482.2341783001 28.99 0.58575 28.99 28.711 29.297 0 130 47 4 0 0 0 0.0025433 2 13816 48.532 36.894 1 1.9158 2.1647 0 15330000 8191800 7138700 29436 1467;1248 11155 11458 45939;45940 45940 956 RFDDAVVQSDMK 12 1 1 Unmodified _RFDDAVVQSDMK_ 0 0 1 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.3499 2 705.837733 1409.66091 70323.36 0.57661 0.00040699 -0.34241 -0.00024168 0.2342 0.00016531 705.83768940717 714.848830387163 52.958 0.71486 52.958 52.54 53.255 0 203 57 6 0 0 0 0.018296 1 26170 57.532 36.662 1 1.5611 1.2865 0 4245000 1593500 2651400 29437 1467;1248 11155 11459 45941 45941 RFDDAVVQSDMK 12 1 1 Unmodified _RFDDAVVQSDMK_ 0 0 1 E9PN89;A4D111;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 E9PN89;V9HW22 V9HW22 HSPA8;LOC401308;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.8384 2 705.837733 1409.66091 71035.59 0.44452 0.00031376 -0.33852 -0.00023894 0.10601 7.4824E-05 705.838021422626 714.848797166145 53.236 0.59614 53.236 52.988 53.584 0 174 42 7 0 0 0 0.0090644 1 25846 51.013 33.149 1 1.8159 1.5338 0 3735900 1128000 2607900 29438 1467;1248 11155 11459 45942 45942 RFDDPGLMLMGFK 13 1 1 2 Oxidation (M) _RFDDPGLM(ox)LM(ox)GFK_ RFDDPGLM(1)LM(1)GFK RFDDPGLM(57.43)LM(57.43)GFK 0 2 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.5866 3 520.251267 1557.73197 81755.34 0.61852 0.00032178 0.0075952 3.9514E-06 0.62611 0.00032574 520.251392532542 526.258790381519 85.448 0.98141 85.448 84.95 85.931 0 364 80 7 0 0 0 0.00028552 1 51134 57.434 57.434 1 0.79229 0.94605 0 52162000 30558000 21604000 29439 82 11156 11460 45943 45943 76;77 RFDDPGLMLMGFK 13 1 1 2 Oxidation (M) _RFDDPGLM(ox)LM(ox)GFK_ RFDDPGLM(1)LM(1)GFK RFDDPGLM(53)LM(53)GFK 0 2 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.5859 3 520.251267 1557.73197 81977.87 0.7408 0.0003854 -0.26373 -0.00013721 0.47707 0.0002482 520.251249003637 526.258645582991 83.907 1.0486 83.907 83.325 84.374 7.6294E-06 354 84 7 0 0 0 0.00048802 1 51288 53.001 53.001 1 0.80372 0.94433 0 61978000 31583000 30394000 29440 82 11156 11460 45944 45944 76;77 RFDDPGLMLMGFKPLVLLK 19 2 1 2 Oxidation (M) _RFDDPGLM(ox)LM(ox)GFKPLVLLK_ RFDDPGLM(1)LM(1)GFKPLVLLK RFDDPGLM(72.42)LM(72.42)GFKPLVLLK 0 2 2 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 741.4079 3 741.407377 2221.2003 NaN NaN NaN -0.22211 -0.00016467 NaN NaN NaN NaN 127.59 0.43333 127.59 127.33 127.76 0 0 0 0 4.7934E-07 1 76030 72.421 63.821 1 NaN NaN 0 7749700 7749700 0 29441 82 11157 11461 45945 45945 76;77 RFDTEEEFK 9 1 1 Unmodified _RFDTEEEFK_ 0 0 1 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.7926 2 600.78021 1199.54587 NaN NaN NaN 0.41602 0.00024994 NaN NaN NaN NaN 33.968 0.24161 33.968 33.83 34.072 0 0 0 0 0.02967 1 17119 53.751 23.181 1 NaN NaN 0 7628300 0 7628300 29442 1609 11158 11462 45946 45946 RFEIINAIYEPTEEECEWKPDEEDEISEELK 31 2 1 Unmodified _RFEIINAIYEPTEEECEWKPDEEDEISEELK_ 0 0 2 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W118;F8VV59;A0A024RBE6;H0YH88;F8W543;F8VRJ2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 974.9564 4 968.195104 3868.75131 61284.55 0.15738 0.00015237 0.16387 0.00015865 0.32124 0.00031103 968.697170093403 974.95557130298 124.64 0.67107 124.64 124.37 125.04 0 217 29 10 0 0 0 2.2605E-08 2 74745 48.449 48.449 1 1.3883 1.4383 0 8540100 3298400 5241600 29443 332 11159 11463 45947;45948 45948 RFEIINAIYEPTEEECEWKPDEEDEISEELK 31 2 1 Unmodified _RFEIINAIYEPTEEECEWKPDEEDEISEELK_ 0 0 2 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W118;F8VV59;A0A024RBE6;H0YH88;F8W543;F8VRJ2 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 975.4506 4 968.195104 3868.75131 61077.86 0.2295 0.0002222 -0.14583 -0.00014119 0.083674 8.1012E-05 968.697108323719 974.955490766121 124.5 0.70893 124.5 124.23 124.94 0 219 32 12 0 0 0 0.025237 1 73836 17.934 17.564 1 1.2799 1.246 0 7359500 3102800 4256700 29444 332 11159 11463 45949 45949 RFFMGNQVLK 10 1 1 Oxidation (M) _RFFM(ox)GNQVLK_ RFFM(1)GNQVLK RFFM(51.85)GNQVLK 0 1 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3348 2 628.334433 1254.65431 76215.95 0.46152 0.00028999 -0.19034 -0.0001196 0.27118 0.00017039 628.334148904444 637.345383084769 47.169 0.2476 47.169 47.021 47.269 -3.8147E-06 88 20 5 0 0 0 0.026628 1 26120 51.854 51.854 1 0.55225 0.64028 0 35523000 22869000 12654000 29445 1476 11160 11464 45950 45950 1219 RFGEYNSNMSPEEK 14 1 1 Oxidation (M) _RFGEYNSNM(ox)SPEEK_ RFGEYNSNM(1)SPEEK RFGEYNSNM(40.59)SPEEK 0 1 1 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.3813 2 852.370126 1702.7257 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.215 1 23.215 22.715 23.715 -1.9073E-06 0 0 0 0.024906 1 9138 40.589 24.336 1 29446 790 11161 11465 45951 45951 630 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.8272 3 576.957905 1727.85189 79382.59 1.043 0.00060176 0.11332 6.5383E-05 1.1563 0.00066714 576.958006445951 582.965444517631 90.959 1.1557 90.959 90.423 91.579 0 414 95 6 0 0 0 5.535E-05 3 55117 55.912 55.912 1 1.159 1.387 0 55791000 27219000 28572000 29447 1511 11162 11466 45952;45953;45954 45953 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.4482 2 864.933219 1727.85189 65482.92 1.2516 0.0010826 -0.073699 -6.3744E-05 1.1779 0.0010188 864.933074463443 873.945067644043 90.908 0.52981 90.908 90.8 91.329 0 115 41 4 0 0 0 0.00037591 1 54983 70.622 70.622 1 1.0988 1.2217 0 19716000 9821800 9894500 29448 1511 11162 11466 45955 45955 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.9581 3 576.957905 1727.85189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.417 1 90.417 89.917 90.917 0 0 0 0 2.0631E-07 1 54637 101.01 85.125 1 29449 1511 11162 11466 45956 45956 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.9326 2 864.933219 1727.85189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.538 1 90.538 90.038 91.038 -7.6294E-06 0 0 0 0.053159 1 54720 50.354 18.024 1 29450 1511 11162 11466 45957 45957 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.9445 2 864.933219 1727.85189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.563 1 90.563 90.063 91.063 0 0 0 0 0.0041406 1 54739 59.227 10.486 1 29451 1511 11162 11466 45958 45958 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.9484 2 864.933219 1727.85189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.594 1 90.594 90.094 91.094 0 0 0 0 0.0053287 1 54758 69.602 23.686 1 29452 1511 11162 11466 45959 45959 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.3018 3 576.957905 1727.85189 79840.07 0.69256 0.00039958 0.1873 0.00010807 0.87987 0.00050765 576.957715516581 583.300025454425 89.132 1.072 89.132 88.584 89.656 0 341 87 5 0 0 0 9.0503E-16 2 54763 103.01 99.49 1 1.0911 1.2811 0 60068000 21220000 38848000 29453 1511 11162 11466 45960;45961 45961 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.9463 2 864.933219 1727.85189 69086.15 0.74868 0.00064756 -0.65157 -0.00056357 0.097105 8.3989E-05 864.932165781753 873.944627679062 88.999 0.57419 88.999 88.687 89.261 0 84 47 4 0 0 0 0.0001436 2 54843 83.314 51.306 1 0.85992 0.98501 0 22929000 8445200 14484000 29454 1511 11162 11466 45962;45963 45962 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.4457 2 864.933219 1727.85189 NaN NaN NaN 1.0703 0.00092576 NaN NaN NaN NaN 89.306 0.11497 89.306 89.272 89.387 7.6294E-06 0 0 0 0.013078 1 55148 48.568 15.51 1 NaN NaN 0 16680000 0 16680000 29455 1511 11162 11466 45964 45964 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.9581 3 576.957905 1727.85189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.431 1 89.431 88.931 89.931 0 0 0 0 2.5308E-07 1 55215 99.451 83.633 1 29456 1511 11162 11466 45965 45965 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.9573 3 576.957905 1727.85189 80934.38 0.4512 0.00026033 0.37945 0.00021893 0.83065 0.00047925 576.957608320291 582.966047285298 102.36 0.60823 102.36 102.07 102.68 0 205 44 7 0 0 0 7.8504E-05 3 57953 46.249 40.875 1 0.88591 0.75602 0 9779600 5026300 4753300 29457 1511 11162 11466 45966;45967;45968 45967 RFGFPEGSVELYAEK 15 1 1 Unmodified _RFGFPEGSVELYAEK_ 0 0 1 P23396;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;A7E2S3 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.9679 3 576.957905 1727.85189 81461.69 0.34515 0.00019913 0.29874 0.00017236 0.64389 0.00037149 576.957618676335 582.965748332275 102.05 0.60901 102.05 101.75 102.36 -7.6294E-06 216 47 7 0 0 0 7.6302E-05 2 56917 52.93 52.93 1 0.94665 0.79871 0 8864000 4122800 4741200 29458 1511 11162 11466 45969;45970 45970 RFGPHGIPVTVFPK 14 1 1 Unmodified _RFGPHGIPVTVFPK_ 0 0 1 Q96N64 Q96N64 Q96N64 PWWP2A PWWP domain-containing protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.9725 3 517.964666 1550.87217 89807.58 0.31277 0.00016201 0.36618 0.00018967 0.67895 0.00035167 518.298953377016 523.972423348739 90.426 0.57021 90.426 90.222 90.793 0 113 35 5 0 0 0 0.032052 1 50119 19.694 19.694 1 1.8115 1.6257 0 2019300 976860 1042500 29459 1980 11163 11467 45971 45971 RFGPHGIPVTVFPK 14 1 1 Unmodified _RFGPHGIPVTVFPK_ 0 0 1 Q96N64 Q96N64 Q96N64 PWWP2A PWWP domain-containing protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.9717 3 517.964666 1550.87217 84964.3 0.092741 4.8037E-05 0.43703 0.00022637 0.52977 0.0002744 517.964601699761 523.972584759673 89.581 0.4934 89.581 89.319 89.813 0 89 31 4 0 0 0 0.063135 1 48708 11.96 11.96 1 1.5531 1.3307 0 1594400 632030 962410 29460 1980 11163 11467 45972 45972 RFGVPVIADGGIQNVGHIAK 20 1 1 Unmodified _RFGVPVIADGGIQNVGHIAK_ 0 0 1 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.7271 3 683.384841 2047.13269 72542.99 0.55977 0.00038254 0.033528 2.2912E-05 0.5933 0.00040545 683.719388388701 689.726905803615 103.2 0.6263 103.2 102.93 103.56 0 236 40 8 0 0 0 8.2185E-08 2 58658 84.499 79.406 1 1.1997 1.0369 0 14094000 6845700 7247800 29461 1282 11164 11468 45973;45974 45974 RFGVPVIADGGIQNVGHIAK 20 1 1 Unmodified _RFGVPVIADGGIQNVGHIAK_ 0 0 1 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.0521 3 683.384841 2047.13269 73338.68 0.41286 0.00028215 -0.047991 -3.2796E-05 0.36487 0.00024935 683.719224182718 689.392245114958 102.7 0.69579 102.7 102.46 103.16 7.6294E-06 227 44 8 0 0 0 0.054874 2 57357 7.6978 7.3807 1 1.1934 1.0107 0 13922000 6833500 7088100 29462 1282 11164 11468 45975;45976 45975 RFNIPPSTLSTILK 14 1 1 Unmodified _RFNIPPSTLSTILK_ 0 0 1 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.6551 3 529.647002 1585.91918 NaN NaN NaN -0.19457 -0.00010305 NaN NaN NaN NaN 107.29 0.80441 107.29 106.85 107.65 0 0 0 0 0.036328 1 66817 28.351 24.047 1 NaN NaN 0 3038200 0 3038200 29463 1450 11165 11469 45977 45977 RFNIPPSTLSTILK 14 1 1 Unmodified _RFNIPPSTLSTILK_ 0 0 1 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.6472 3 529.647002 1585.91918 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.49 1 107.49 106.99 107.99 0 0 0 0 0.048437 1 66947 24.558 5.235 1 29464 1450 11165 11469 45978 45978 RFNIPPSTLSTILK 14 1 1 Unmodified _RFNIPPSTLSTILK_ 0 0 1 P07199;Q71VN4 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.655 3 529.647002 1585.91918 85908.38 0.61158 0.00032392 -0.031877 -1.6884E-05 0.5797 0.00030704 529.646934604935 535.654466921692 116.75 1.1351 116.75 116.19 117.33 0 112 51 4 0 0 0 0.037569 1 67796 18.321 13.93 1 1.7716 1.5254 0 1883100 626380 1256700 29465 1450 11165 11469 45979 45979 RFPELESLVPNALDYIR 17 0 2 Unmodified _RFPELESLVPNALDYIR_ 0 0 1 B4DWW8;E7EVX8;Q8WWY3;E7EU94;E7ESX0;E7EN72 B4DWW8 B4DWW8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.7065 3 678.033585 2031.07893 76272.99 0.86378 0.00058567 0.17852 0.00012104 1.0423 0.00070672 678.368299872638 685.040041572216 132.57 0.25662 132.57 132.39 132.64 0 41 16 4 0 0 0 0.0026456 1 86626 31.41 31.41 1 0.83898 0.94412 0 5527700 2827500 2700200 29466 1046 11166 11470 45980 45980 RFPGYDSESK 10 1 1 Unmodified _RFPGYDSESK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.2803 2 593.280377 1184.5462 77380.25 0.61556 0.0003652 -1.0853 -0.00064388 -0.46972 -0.00027868 593.280451503394 602.291538568099 25.181 1.1111 25.181 24.772 25.883 0 281 59 10 0 0 0 5.3186E-30 2 10699 178.32 153.38 1 0.87976 1.0703 0 506590000 256890000 249700000 29467 653 11167 11471 45981;45982 45982 RFPGYDSESK 10 1 1 Unmodified _RFPGYDSESK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.2817 2 593.280377 1184.5462 77709.56 0.86259 0.00051176 -0.035333 -2.0962E-05 0.82726 0.0004908 593.280572139038 602.291491577399 24.802 1.2296 24.802 24.335 25.565 0 265 50 11 0 0 0 1.4994E-30 2 10420 185.6 185.6 1 0.96013 1.1464 0 804890000 418090000 386810000 29468 653 11167 11471 45983;45984 45984 RFPGYDSESK 10 1 1 Unmodified _RFPGYDSESK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.2915 2 593.280377 1184.5462 76783.88 0.53442 0.00031706 -0.19779 -0.00011735 0.33662 0.00019971 593.28059447081 602.291473721565 27.85 1.3007 27.85 27.528 28.829 1.9073E-06 309 65 10 0 0 0 1.6489E-05 3 10889 105.35 105.35 1 0.92021 0.82412 0 84196000 42123000 42073000 29469 653 11167 11471 45985;45986;45987 45987 RFPGYDSESK 10 1 1 Unmodified _RFPGYDSESK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.2806 2 593.280377 1184.5462 77568.3 0.25378 0.00015056 -0.051028 -3.0274E-05 0.20275 0.00012029 593.280551234222 602.291469944184 27.912 1.0948 27.912 27.549 28.643 0 359 52 14 0 0 0 7.3551E-06 2 10381 109.44 109.44 1 0.89132 0.76038 0 62114000 32888000 29226000 29470 653 11167 11471 45988;45989 45989 RFPVAPLIPYPLITK 15 1 1 Unmodified _RFPVAPLIPYPLITK_ 0 0 1 P49756;H0YE46 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.6948 3 575.686909 1724.0389 80960.1 0.81342 0.00046827 -0.30316 -0.00017452 0.51026 0.00029375 576.020984373465 582.028530386145 121.39 0.58514 121.39 121.16 121.75 0 154 37 6 0 0 0 0.0049129 2 78339 31.389 31.389 1 1.1874 1.2895 0 9942300 4546900 5395400 29471 1587 11168 11472 45990;45991 45990 RFPVAPLIPYPLITK 15 1 1 Unmodified _RFPVAPLIPYPLITK_ 0 0 1 P49756;H0YE46 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.6876 3 575.686909 1724.0389 82728.48 0.94856 0.00054607 -0.25329 -0.00014582 0.69527 0.00040026 575.686748003523 581.694289795984 120.67 0.6272 120.67 120.38 121.01 0 162 43 5 0 0 0 0.0053362 2 79660 30.739 30.739 1 1.365 1.5139 0 9871200 3989400 5881800 29472 1587 11168 11472 45992;45993 45992 RFPVAPLIPYPLITK 15 1 1 Unmodified _RFPVAPLIPYPLITK_ 0 0 1 P49756;H0YE46 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.695 3 575.686909 1724.0389 80970.67 1.0241 0.00058958 0.22656 0.00013043 1.2507 0.00072001 575.687027466778 581.694350177652 132.53 0.37123 132.53 132.38 132.75 0 60 16 6 0 0 0 0.011352 1 80571 23.831 23.831 1 1.0977 1.0016 0 1621900 789270 832650 29473 1587 11168 11472 45994 45994 RFPVAPLIPYPLITK 15 1 1 Unmodified _RFPVAPLIPYPLITK_ 0 0 1 P49756;H0YE46 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.6944 3 575.686909 1724.0389 81075.48 1.0235 0.0005892 -0.24136 -0.00013895 0.78211 0.00045025 576.021182567255 581.694140303773 132.19 0.36937 132.19 132.01 132.38 0 66 16 5 0 0 0 0.021706 2 79457 21.233 21.233 1 0.86888 0.74372 0 1555500 790290 765250 29474 1587 11168 11472 45995;45996 45995 RFQDGAIR 8 0 2 Unmodified _RFQDGAIR_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.7617 2 481.761958 961.509363 87218.22 0.18129 8.7337E-05 0.029974 1.444E-05 0.21126 0.00010178 481.762050651704 491.770042780096 20.807 0.47243 20.807 20.599 21.071 0 52 18 5 0 0 0 0.018014 1 7111 71.501 33.263 1 1.1229 1.2178 0 17309000 8591600 8717700 29475 2038 11169 11473 45997 45997 RFQLPLDK 8 1 1 Unmodified _RFQLPLDK_ 0 0 1 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.81 2 508.798009 1015.58147 84054.73 0.56816 0.00028908 -0.53696 -0.00027321 0.031197 1.5873E-05 508.798004774391 517.808757150224 59.112 0.37531 59.112 58.932 59.307 -3.8147E-06 100 34 4 0 0 0 0.025232 1 34354 61.999 61.999 1 0.77591 0.87695 0 15452000 8172700 7279000 29476 1680 11170 11474 45998 45998 RFQQAVDAVEEFLR 14 0 2 Unmodified _RFQQAVDAVEEFLR_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.6379 3 569.965283 1706.87402 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.41 1 114.41 113.91 114.91 7.6294E-06 0 0 0 0.051608 1 72611 31.914 25.646 1 29477 1194;1193;1346 11171 11475 45999 45999 RFQQAVDAVEEFLR 14 0 2 Unmodified _RFQQAVDAVEEFLR_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.6381 3 569.965283 1706.87402 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.67 1 114.67 114.17 115.17 7.6294E-06 0 0 0 0.038545 1 72819 35.527 23.913 1 29478 1194;1193;1346 11171 11475 46000 46000 RFQQAVDAVEEFLR 14 0 2 Unmodified _RFQQAVDAVEEFLR_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.6375 3 569.965283 1706.87402 84577.41 0.73773 0.00042048 0.11584 6.6025E-05 0.85357 0.0004865 570.299725393776 576.971871885072 112.77 0.49433 112.77 112.49 112.98 0 76 33 4 0 0 0 7.8214E-05 2 72899 61.732 56.303 1 1.7667 1.7423 0 6680300 2271600 4408800 29479 1194;1193;1346 11171 11475 46001;46002 46001 RFQQAVDAVEEFLR 14 0 2 Unmodified _RFQQAVDAVEEFLR_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.3002 3 569.965283 1706.87402 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.12 1 113.12 112.62 113.62 0 0 0 0 0.030418 1 73350 27.028 17.24 1 29480 1194;1193;1346 11171 11475 46003 46003 RFQQAVDAVEEFLR 14 0 2 Unmodified _RFQQAVDAVEEFLR_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.6378 3 569.965283 1706.87402 79375.64 0.79497 0.00045311 -0.28385 -0.00016179 0.51112 0.00029132 569.964897607533 576.637361331149 123.03 0.81886 123.03 122.74 123.56 7.6294E-06 159 36 8 0 0 0 3.1881E-05 1 73428 80.632 70.293 1 1.9983 1.6821 0 11382000 4532000 6850100 29481 1194;1193;1346 11171 11475 46004 46004 RFQQAVDAVEEFLR 14 0 2 Unmodified _RFQQAVDAVEEFLR_ 0 0 1 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.2998 3 569.965283 1706.87402 79817.11 0.7908 0.00045073 -0.29185 -0.00016634 0.49895 0.00028439 569.964919632252 576.637325074834 122.72 0.65156 122.72 122.49 123.14 7.6294E-06 153 31 8 0 0 0 4.6929E-05 2 72347 55.66 53.491 1 2.0199 1.8442 0 8534400 2783900 5750500 29482 1194;1193;1346 11171 11475 46005;46006 46006 RFSCIIGPNGSGK 13 1 1 Unmodified _RFSCIIGPNGSGK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.8557 2 696.856261 1391.69797 77085.45 0.67841 0.00047275 0.10308 7.1834E-05 0.78149 0.00054459 696.856027966996 705.867689196747 40.698 0.39417 40.698 40.473 40.867 0 97 35 4 0 0 0 0.012667 1 21353 56.205 56.205 1 0.83029 0.88879 0 12689000 7042100 5646900 29483 2070;1136 11172 11476 46007 46007 RFSCIIGPNGSGK 13 1 1 Unmodified _RFSCIIGPNGSGK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.8569 2 696.856261 1391.69797 NaN NaN NaN -0.083851 -5.8432E-05 NaN NaN NaN NaN 39.081 0.37019 39.081 38.908 39.278 3.8147E-06 0 0 0 0.0016103 1 20597 74.78 60.114 1 NaN NaN 0 9161400 9161400 0 29484 2070;1136 11172 11476 46008 46008 RFSGTVR 7 0 2 Unmodified _RFSGTVR_ 0 0 1 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.7328 2 411.732669 821.450785 92535.85 -0.013535 -5.5726E-06 -0.3228 -0.00013291 -0.33634 -0.00013848 411.732549706493 421.740831987563 17.126 0.65878 17.126 16.991 17.65 0 82 22 9 0 0 0 0.017069 1 4320 122.18 41.95 1 0.88235 0.96461 0 293640000 151940000 141700000 29485 1651 11173 11477 46009 46009 RFSQMLQDK 9 1 1 Oxidation (M) _RFSQM(ox)LQDK_ RFSQM(1)LQDK RFSQM(72.33)LQDK 0 1 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.8042 2 584.792598 1167.57064 79102.16 0.19462 0.00011381 -0.12136 -7.0969E-05 0.07326 4.2842E-05 584.792417281961 593.803859442303 20.27 0.28495 20.27 20.108 20.393 0 23 9 3 0 0 0 0.0074511 1 6738 72.325 39.485 1 0.74914 0.88825 0 42014000 25598000 16416000 29486 2037 11174 11478 46010 46010 1872 RFSQMLQDK 9 1 1 Oxidation (M) _RFSQM(ox)LQDK_ RFSQM(1)LQDK RFSQM(85.73)LQDK 0 1 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.7921 2 584.792598 1167.57064 75936.92 0.37767 0.00022086 0.38738 0.00022654 0.76505 0.00044739 584.792387390441 593.803754310985 20.499 0.57368 20.499 20.108 20.682 0 90 23 7 0 0 0 0.0032606 1 6901 85.731 49.335 1 1.0247 1.2304 0 65478000 33587000 31891000 29487 2037 11174 11478 46011 46011 1872 RFSQMLQDK 9 1 1 Oxidation (M) _RFSQM(ox)LQDK_ RFSQM(1)LQDK RFSQM(96.33)LQDK 0 1 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.793 2 584.792598 1167.57064 76412.86 0.45782 0.00026773 0.435 0.00025438 0.89282 0.00052211 584.792469611304 593.803927310479 20.175 0.5625 20.175 19.888 20.45 1.9073E-06 99 20 8 0 0 0 0.0014925 1 6518 96.331 51.884 1 0.91697 1.0781 0 68246000 37972000 30274000 29488 2037 11174 11478 46012 46012 1872 RFSQMLQDK 9 1 1 Oxidation (M) _RFSQM(ox)LQDK_ RFSQM(1)LQDK RFSQM(99.01)LQDK 0 1 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.804 2 584.792598 1167.57064 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.949 1 19.949 19.449 20.449 0 0 0 0 0.00043085 1 6286 99.013 56.904 1 29489 2037 11174 11478 46013 46013 1872 RFVDPNTQEK 10 1 1 Unmodified _RFVDPNTQEK_ 0 0 1 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.3264 2 617.314751 1232.61495 74377.69 0.38636 0.00023851 0.24484 0.00015114 0.6312 0.00038965 617.315196953203 626.326192638315 20.694 0.42514 20.694 20.534 20.959 1.9073E-06 52 17 6 0 0 0 4.6726E-09 2 7071 126.07 126.07 1 1.7764 1.9792 0 20108000 7130100 12978000 29490 397;1622 11175 11479 46014;46015 46014 RFVEVGR 7 0 2 Unmodified _RFVEVGR_ 0 0 1 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 E7EPB3;A8K3Q9 A8K3Q9 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 431.7482 2 431.748319 861.482085 91656.82 -0.36234 -0.00015644 0.43814 0.00018917 0.075807 3.273E-05 431.748358156301 441.756681686052 24.74 0.31604 24.74 24.566 24.883 0 64 14 6 0 0 0 0.016795 1 10399 117.1 52.294 1 0.7689 0.83721 0 77394000 44534000 32860000 29491 645;725 11176 11480 46016 46016 RFVNVVPTFGK 11 1 1 Unmodified _RFVNVVPTFGK_ 0 0 1 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.364 2 632.364047 1262.71354 76393.38 0.58111 0.00036748 -0.21636 -0.00013682 0.36475 0.00023066 632.363798410545 641.375119589334 78.776 1.7984 78.776 77.962 79.76 7.6294E-06 752 159 7 0 0 0 4.8003E-05 3 46336 101.54 101.54 1 0.87917 1.0596 0 118240000 60929000 57315000 29492 1250 11177 11481 46017;46018;46019 46018 RFVNVVPTFGK 11 1 1 Unmodified _RFVNVVPTFGK_ 0 0 1 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 421.9117 3 421.91179 1262.71354 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.417 1 79.417 78.917 79.917 0 0 0 0 0.042315 1 47104 30.205 17.629 1 29493 1250 11177 11481 46020 46020 RFVNVVPTFGK 11 1 1 Unmodified _RFVNVVPTFGK_ 0 0 1 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.2629 3 421.91179 1262.71354 93401.52 0.23174 9.7776E-05 -0.12164 -5.1319E-05 0.11011 4.6456E-05 421.911734351199 427.91927504196 79.018 0.78603 79.018 78.652 79.438 0 171 70 5 0 0 0 0.025201 1 46947 32.999 32.999 1 0.81436 0.95878 0 34021000 16787000 17233000 29494 1250 11177 11481 46021 46021 RFVNVVPTFGK 11 1 1 Unmodified _RFVNVVPTFGK_ 0 0 1 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3755 2 632.364047 1262.71354 76198.16 0.25977 0.00016427 0.31087 0.00019659 0.57064 0.00036085 632.364137751788 641.375387509793 76.348 1.407 76.348 75.726 77.133 0 604 117 9 0 0 0 1.3117E-05 2 45946 109.66 109.66 1 0.81298 0.96165 0 180700000 102790000 77907000 29495 1250 11177 11481 46022;46023 46023 RFVNVVPTFGK 11 1 1 Unmodified _RFVNVVPTFGK_ 0 0 1 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.9194 3 421.91179 1262.71354 90915.27 -0.32861 -0.00013864 0.36536 0.00015415 0.036753 1.5507E-05 421.911825048546 427.919415780554 76.363 0.99845 76.363 75.832 76.83 0 354 83 6 0 0 0 0.00049035 2 45927 48.188 44.965 1 0.84405 0.98846 0 54013000 31713000 22299000 29496 1250 11177 11481 46024;46025 46024 RFVNVVPTFGK 11 1 1 Unmodified _RFVNVVPTFGK_ 0 0 1 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.3761 2 632.364047 1262.71354 76114.29 0.72863 0.00046076 -0.16422 -0.00010385 0.56441 0.00035691 632.363935310764 641.37511683423 88.37 1.2182 88.37 88.063 89.281 -7.6294E-06 451 76 9 0 0 0 0.0030194 2 48594 64.711 64.711 1 0.57158 0.50785 0 56522000 35311000 21211000 29497 1250 11177 11481 46026;46027 46026 RFVNVVPTFGK 11 1 1 Unmodified _RFVNVVPTFGK_ 0 0 1 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 427.9193 3 421.91179 1262.71354 91163.5 -0.08166 -3.4453E-05 0.013403 5.6547E-06 -0.068258 -2.8799E-05 421.911778238726 427.919231916586 88.359 1.0117 88.359 88.063 89.074 0 316 64 8 0 0 0 0.025958 2 48686 21.759 21.759 1 0.56918 0.48872 0 11122000 6990500 4131600 29498 1250 11177 11481 46028;46029 46029 RFVNVVPTFGK 11 1 1 Unmodified _RFVNVVPTFGK_ 0 0 1 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.3751 2 632.364047 1262.71354 75998.8 0.54608 0.00034532 0.26933 0.00017032 0.81541 0.00051563 632.364242784644 641.37535045225 88.131 1.3253 88.131 87.788 89.113 0 449 79 9 0 0 0 0.00038216 2 47645 91.584 91.584 1 0.56165 0.47877 0 53036000 34704000 18332000 29499 1250 11177 11481 46030;46031 46031 RFVNVVPTFGK 11 1 1 Unmodified _RFVNVVPTFGK_ 0 0 1 E9PR30;P62861 E9PR30 E9PR30 FAU 40S ribosomal protein S30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 427.9193 3 421.91179 1262.71354 92007.49 -0.42529 -0.00017943 0.51105 0.00021562 0.085766 3.6186E-05 421.911991526747 427.919477088229 88.129 0.89453 88.129 87.84 88.734 0 241 51 8 0 0 0 0.010997 2 47669 28.806 28.806 1 0.57659 0.48787 0 11450000 6948800 4501500 29500 1250 11177 11481 46032;46033 46033 RFYPAEWQDFLDSLQK 16 1 1 Unmodified _RFYPAEWQDFLDSLQK_ 0 0 1 Q9Y3C1 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.0043 3 681.670535 2041.98978 74079.5 0.78172 0.00053288 -0.12514 -8.5307E-05 0.65658 0.00044757 682.004623101419 688.012614418381 133.52 0.52582 133.52 133.34 133.86 0 116 21 9 0 0 0 0.00016408 1 81355 48.547 38.966 1 0.76457 0.62649 0 4691600 2772900 1918700 29501 2135 11178 11482 46034 46034 RFYPAEWQDFLDSLQK 16 1 1 Unmodified _RFYPAEWQDFLDSLQK_ 0 0 1 Q9Y3C1 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.0126 3 681.670535 2041.98978 73210.66 1.0994 0.00074945 -0.51378 -0.00035023 0.58565 0.00039922 682.00447759261 688.012245388078 133.16 0.51665 133.16 132.99 133.5 0 98 20 7 0 0 0 0.000355 2 80177 33.872 33.872 1 1.0065 0.84654 0 4465600 2110700 2354900 29502 2135 11178 11482 46035;46036 46035 RGAPAAATAPAPTAHK 16 1 1 Unmodified _RGAPAAATAPAPTAHK_ 0 0 1 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.6154 3 496.60743 1486.80046 84737.84 -0.018345 -9.1101E-06 0.076062 3.7773E-05 0.057717 2.8663E-05 496.607545693992 502.614856744735 17.382 0.43644 17.382 17.181 17.617 0 87 15 9 0 0 0 0.0034056 1 4658 31.876 31.876 1 0.86571 1.0433 0 116050000 59673000 56380000 29503 1946 11179 11483 46037 46037 RGAPAAATAPAPTAHK 16 1 1 Unmodified _RGAPAAATAPAPTAHK_ 0 0 1 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.6159 3 496.60743 1486.80046 84731.16 0.37951 0.00018847 0.29379 0.0001459 0.6733 0.00033436 496.607735913747 502.614979930047 17.182 0.54272 17.182 17.037 17.579 0 91 17 11 0 0 0 9.6514E-05 1 4173 51.265 51.265 1 0.87453 1.0305 0 97432000 52205000 45228000 29504 1946 11179 11483 46038 46038 RGAPAAATAPAPTAHK 16 1 1 Unmodified _RGAPAAATAPAPTAHK_ 0 0 1 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 377.2131 4 372.707391 1486.80046 95943.96 0.37709 0.00014054 -0.22112 -8.2411E-05 0.15597 5.8133E-05 372.707177395474 377.213042583262 17.182 0.28384 17.182 17.037 17.32 0 19 7 5 0 0 0 0.021972 1 4220 20.049 18.683 1 1.1246 1.2384 0 6043300 3118200 2925100 29505 1946 11179 11483 46039 46039 RGAPAAATAPAPTAHK 16 1 1 Unmodified _RGAPAAATAPAPTAHK_ 0 0 1 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.6148 3 496.60743 1486.80046 84227.64 -0.10783 -5.3548E-05 -0.10297 -5.1133E-05 -0.21079 -0.00010468 496.60763351179 502.614782773091 18.306 0.45369 18.306 18.138 18.592 0 149 21 11 0 0 0 8.0282E-05 2 4353 54.281 54.281 1 0.59747 0.52695 0 39032000 25204000 13828000 29506 1946 11179 11483 46040;46041 46040 RGAPAAATAPAPTAHK 16 1 1 Unmodified _RGAPAAATAPAPTAHK_ 0 0 1 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.4193 2 744.407506 1486.80046 70399.73 0.14939 0.00011121 0.57886 0.00043091 0.72826 0.00054212 744.407921924167 753.419254738209 18.154 0.21615 18.154 18.036 18.252 0 102 14 9 0 0 0 0.038812 1 3841 35.737 35.737 1 0.5564 0.46651 0 6239100 4118300 2120800 29507 1946 11179 11483 46042 46042 RGAPAAATAPAPTAHK 16 1 1 Unmodified _RGAPAAATAPAPTAHK_ 0 0 1 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 502.615 3 496.60743 1486.80046 84230 -0.27423 -0.00013619 0.33127 0.00016451 0.057035 2.8324E-05 496.607744953176 502.615041607819 18.152 0.62317 18.152 17.883 18.506 0 217 40 11 0 0 0 8.0282E-05 1 3850 54.281 54.281 1 0.57915 0.49225 0 28970000 18008000 10962000 29508 1946 11179 11483 46043 46043 RGAPPSSNIEDFHGLLPK 18 1 1 Unmodified _RGAPPSSNIEDFHGLLPK_ 0 0 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;H0Y8T4 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.683 3 645.67428 1934.00101 74916.01 0.43078 0.00027814 -0.0061374 -3.9628E-06 0.42464 0.00027418 645.6742215877 652.01622679302 88.854 0.50224 88.854 88.594 89.096 0 112 32 5 0 0 0 0.042332 1 48183 12.792 8.0824 1 1.0288 0.88851 0 2137300 1133600 1003700 29509 542 11180 11484 46044 46044 RGDIIGVQGNPGK 13 1 1 Unmodified _RGDIIGVQGNPGK_ 0 0 1 Q15046;J3KRL2;H3BPV7;H3BVA8 Q15046 Q15046 KARS Lysine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8741 2 655.8624 1309.71025 NaN NaN NaN 0.44053 0.00028893 NaN NaN NaN NaN 29.104 0.10195 29.104 29.032 29.134 0 0 0 0 0.0012265 1 13990 77.062 59.832 1 NaN NaN 0 7978400 0 7978400 29510 1749 11181 11485 46045 46045 RGDLPFVVPR 10 0 2 Unmodified _RGDLPFVVPR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 386.2268 3 385.892619 1154.65603 96591.18 0.049095 1.8945E-05 0.66879 0.00025808 0.71788 0.00027703 385.892538938916 392.564635417045 77.464 1.3652 77.464 76.725 78.09 0 331 112 6 0 0 0 0.00086631 1 45707 64.439 64.439 1 1.9485 2.1059 0 15700000 5302500 10397000 29511 81 11182 11486 46046 46046 RGDLPFVVPR 10 0 2 Unmodified _RGDLPFVVPR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.3437 2 578.33529 1154.65603 80068.41 0.56325 0.00032575 0.10769 6.2283E-05 0.67095 0.00038803 578.335243970393 588.343548900841 75.585 1.1284 75.585 75.19 76.319 0 393 103 8 0 0 0 0.004808 1 45413 67.113 49.873 1 1.4922 1.7342 0 86571000 35547000 51024000 29512 81 11182 11486 46047 46047 RGDLPFVVPR 10 0 2 Unmodified _RGDLPFVVPR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 392.5648 3 385.892619 1154.65603 96406.5 0.15924 6.1449E-05 -0.19399 -7.486E-05 -0.034755 -1.3412E-05 385.892473268392 392.564657922998 87.146 0.67049 87.146 86.901 87.572 0 116 37 4 0 0 0 0.012235 1 47859 28.708 21.82 1 2.7045 2.4526 0 2932000 747580 2184400 29513 81 11182 11486 46048 46048 RGDLPFVVPR 10 0 2 Unmodified _RGDLPFVVPR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 392.565 3 385.892619 1154.65603 98753.41 0.10243 3.9528E-05 -0.062366 -2.4067E-05 0.040065 1.5461E-05 385.892597376232 392.564665485245 86.974 0.81347 86.974 86.603 87.416 0 129 49 4 0 0 0 0.053311 1 46819 16.137 9.2492 1 2.7582 2.4548 0 1782000 453910 1328100 29514 81 11182 11486 46049 46049 RGDTVATLSER 11 0 2 Unmodified _RGDTVATLSER_ 0 0 1 Q3B7A7;Q59HH3;P22102;B4DJ93 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8255 2 602.817658 1203.62076 76888.98 0.23963 0.00014445 -0.01789 -1.0785E-05 0.22174 0.00013367 602.817377331726 612.825739459935 25.205 0.34281 25.205 25.05 25.393 1.9073E-06 64 15 8 0 0 0 0.00082337 1 10820 74.751 47.75 1 3.9032 4.2399 0 35157000 8651900 26505000 29515 1507 11183 11487 46050 46050 RGDTVATLSER 11 0 2 Unmodified _RGDTVATLSER_ 0 0 1 Q3B7A7;Q59HH3;P22102;B4DJ93 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8264 2 602.817658 1203.62076 79062.34 0.77916 0.00046969 -0.41669 -0.00025119 0.36248 0.00021851 602.817044953308 612.825836266932 24.812 0.37143 24.812 24.616 24.987 -1.9073E-06 78 16 10 0 0 0 0.00057093 1 10424 86.114 58.101 1 3.5451 4.0935 0 67382000 17121000 50261000 29516 1507 11183 11487 46051 46051 RGEGEDEVEEESTALQK 17 1 1 Unmodified _RGEGEDEVEEESTALQK_ 0 0 1 Q96T23;H0YCN2;H0YEX0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.9604 3 635.960591 1904.85994 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.582 1 39.582 39.082 40.082 0 0 0 0 7.1546E-05 1 20548 61.167 57.531 1 29517 1991 11184 11488 46052 46052 RGEGEDEVEEESTALQK 17 1 1 Unmodified _RGEGEDEVEEESTALQK_ 0 0 1 Q96T23;H0YCN2;H0YEX0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.9615 3 635.960591 1904.85994 75637.92 0.52104 0.00033136 0.090939 5.7833E-05 0.61198 0.0003892 635.960519993224 641.968087953278 38.329 0.42432 38.329 38.134 38.558 0 168 34 8 0 0 0 7.9643E-08 2 20141 97.214 92.745 1 0.53825 0.62203 0 31496000 21031000 10464000 29518 1991 11184 11488 46053;46054 46054 RGEGEDEVEEESTALQK 17 1 1 Unmodified _RGEGEDEVEEESTALQK_ 0 0 1 Q96T23;H0YCN2;H0YEX0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.2958 3 635.960591 1904.85994 76926.73 0.36866 0.00023445 0.11363 7.2265E-05 0.48229 0.00030672 635.960622585443 642.302397477914 46.377 0.42442 46.377 46.175 46.599 0 107 27 5 0 0 0 0.012456 2 22300 22.313 22.313 1 0.92632 0.81315 0 2369600 1250000 1119700 29519 1991 11184 11488 46055;46056 46055 RGEGEDEVEEESTALQK 17 1 1 Unmodified _RGEGEDEVEEESTALQK_ 0 0 1 Q96T23;H0YCN2;H0YEX0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.9686 3 635.960591 1904.85994 76801.49 0.2436 0.00015492 -0.012647 -8.0432E-06 0.23095 0.00014688 635.960357917148 641.968255506445 46.747 0.4656 46.747 46.48 46.945 -3.8147E-06 103 28 5 0 0 0 0.015858 2 22041 21.359 16.811 1 0.79476 0.6768 0 1374400 688950 685410 29520 1991 11184 11488 46057;46058 46058 RGEYIYTGNAK 11 1 1 Unmodified _RGEYIYTGNAK_ 0 0 1 A0A024R9B5;B4DMM7;Q15291;B4DLF8 A0A024R9B5 A0A024R9B5 RBBP5 Retinoblastoma-binding protein 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.3247 2 636.322576 1270.6306 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.106 1 25.106 24.606 25.606 0 0 0 0 5.6409E-05 1 10754 91.549 47.124 1 29521 272 11185 11489 46059 46059 RGFSDSGGGPPAK 13 1 1 Unmodified _RGFSDSGGGPPAK_ 0 0 1 Q9H307;A8K964;G3V5F0;G3V579 Q9H307 Q9H307 PNN Pinin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.8169 2 616.804551 1231.59455 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.214 1 18.214 17.714 18.714 0 0 0 0 0.016887 1 4952 57.836 28.749 1 29522 2028 11186 11490 46060 46060 RGFVLQDTVEQLR 13 0 2 Unmodified _RGFVLQDTVEQLR_ 0 0 1 A8K492;P56192;B4DF61;B4E0E9;H0YHV5 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.9609 3 520.954606 1559.84199 NaN NaN NaN -1.2668 -0.00065996 NaN NaN NaN NaN 96.42 0.61047 96.42 96.115 96.726 -7.6294E-06 0 0 0 0.027949 1 53318 33.204 26.322 1 NaN NaN 0 1109600 0 1109600 29523 732 11187 11491 46061 46061 RGGFAVQAK 9 1 1 Unmodified _RGGFAVQAK_ 0 0 1 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4;Q05CP8 Q8TDN6;Q05CP8 Q8TDN6 BRIX1;BXDC2;CCDC6 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.2675 2 467.266876 932.519199 88219.51 0.021012 9.8184E-06 -3.8641 -0.0018056 -3.8431 -0.0017958 467.265437316324 476.27568294815 20.74 0.46247 20.74 20.45 20.912 0 91 19 8 0 0 0 0.0082788 1 7043 67.981 3.1775 1 1.5205 1.8065 0 44710000 12693000 32017000 29524 1934;1686 11188 11492 46062 46062 RGGFAVQAK 9 1 1 Unmodified _RGGFAVQAK_ 0 0 1 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4;Q05CP8 Q8TDN6;Q05CP8 Q8TDN6 BRIX1;BXDC2;CCDC6 Ribosome biogenesis protein BRX1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.279 2 467.266876 932.519199 NaN NaN NaN -4.1149 -0.0019227 NaN NaN NaN NaN 20.472 0.38498 20.472 20.28 20.665 0 0 0 0 0.031518 1 6654 53.166 6.0995 1 NaN NaN 0 13196000 0 13196000 29525 1934;1686 11188 11492 46063 46063 RGGFAVQAK 9 1 1 Unmodified _RGGFAVQAK_ 0 0 1 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4;Q05CP8 Q8TDN6;Q05CP8 Q8TDN6 BRIX1;BXDC2;CCDC6 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 476.2777 2 467.266876 932.519199 85681.75 -0.12541 -5.8602E-05 -0.16266 -7.6007E-05 -0.28808 -0.00013461 467.266335193008 476.278145110383 21.585 0.47792 21.585 21.381 21.859 -1.9073E-06 75 18 8 0 0 0 0.061925 1 6107 43.246 7.3663 1 1.4668 1.2321 0 4773700 1944400 2829300 29526 1934;1686 11188 11492 46064 46064 RGGPNYQEGLR 11 0 2 Unmodified _RGGPNYQEGLR_ 0 0 1 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;K7EIE7 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8277 2 623.817993 1245.62143 77235.09 0.77064 0.00048074 0.018792 1.1723E-05 0.78944 0.00049246 624.319700193259 633.826293309857 22.824 0.24631 22.824 22.733 22.979 0 45 12 6 0 0 0 0.02969 1 8824 45.161 45.161 1 1.7503 1.9238 0 12175000 4531100 7643400 29527 89 11189 11493 46065 46065 RGGSPAVTLLISEK 14 1 1 Unmodified _RGGSPAVTLLISEK_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.4252 2 714.414465 1426.81438 72161.05 0.81592 0.00058291 -0.24696 -0.00017643 0.56896 0.00040647 714.414234197101 723.42552487266 75.406 0.68758 75.406 75.13 75.818 0 284 57 6 0 0 0 0.0024368 1 44190 53.569 40.216 1 1.6153 1.917 0 43217000 17166000 26052000 29528 1914 11190 11494 46066 46066 RGGSPAVTLLISEK 14 1 1 Unmodified _RGGSPAVTLLISEK_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.2874 3 476.612069 1426.81438 87197.55 0.24114 0.00011493 0.014127 6.7332E-06 0.25526 0.00012166 476.612084897569 482.619544051297 75.395 0.63904 75.395 75.152 75.791 0 182 53 4 0 0 0 0.035826 1 44309 16.363 16.363 1 1.6787 1.9035 0 23827000 8825200 15002000 29529 1914 11190 11494 46067 46067 RGGSPAVTLLISEK 14 1 1 Unmodified _RGGSPAVTLLISEK_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.4246 2 714.414465 1426.81438 72691.56 0.57653 0.00041188 -0.15446 -0.00011035 0.42208 0.00030154 714.414231028996 723.425572655193 73.283 0.75751 73.283 72.965 73.722 0 300 64 6 0 0 0 0.00031336 1 43952 71.176 46.832 1 1.5267 1.7756 0 40438000 13014000 27425000 29530 1914 11190 11494 46068 46068 RGGSPAVTLLISEK 14 1 1 Unmodified _RGGSPAVTLLISEK_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.4265 2 714.414465 1426.81438 71514.07 0.66404 0.0004744 -0.064949 -4.6401E-05 0.59909 0.000428 714.414458051589 723.42544684365 85.35 0.657 85.35 85.027 85.684 0 234 41 8 0 0 0 0.0063075 1 46531 46.592 28.728 1 1.5008 1.3036 0 18077000 7421500 10655000 29531 1914 11190 11494 46069 46069 RGGSPAVTLLISEK 14 1 1 Unmodified _RGGSPAVTLLISEK_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 482.6193 3 476.612069 1426.81438 87264.2 0.16922 8.0653E-05 -0.021168 -1.0089E-05 0.14805 7.0564E-05 476.612075824805 482.619460653556 85.363 0.55576 85.363 85.042 85.598 0 155 35 6 0 0 0 5.9316E-05 1 46640 50.305 50.305 1 1.4244 1.2095 0 8808600 4023700 4784900 29532 1914 11190 11494 46070 46070 RGGSPAVTLLISEK 14 1 1 Unmodified _RGGSPAVTLLISEK_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.4144 2 714.414465 1426.81438 71754.72 0.74112 0.00052947 -0.11141 -7.9595E-05 0.62971 0.00044987 714.414371748785 723.425529295881 85.109 0.63907 85.109 84.826 85.465 0 253 43 8 0 0 0 0.01382 1 45637 39.016 39.016 1 1.5052 1.2753 0 15046000 5710900 9335500 29533 1914 11190 11494 46071 46071 RGGSPAVTLLISEK 14 1 1 Unmodified _RGGSPAVTLLISEK_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.6188 3 476.612069 1426.81438 NaN NaN NaN -0.89627 -0.00042717 NaN NaN NaN NaN 85.112 0.60422 85.112 84.812 85.416 7.6294E-06 0 0 0 0.0049042 1 45622 46.319 38.948 1 NaN NaN 0 3617100 0 3617100 29534 1914 11190 11494 46072 46072 RGIEKPPFELPDFIK 15 2 1 Unmodified _RGIEKPPFELPDFIK_ 0 0 2 Q13435;Q7Z3K9;E9PPJ0 Q13435 Q13435 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.0018 3 596.001445 1784.98251 78782.52 0.70081 0.00041768 -0.08843 -5.2704E-05 0.61238 0.00036498 596.335544402015 604.680478332805 115.3 0.42339 115.3 115.07 115.5 0 89 20 6 0 0 0 0.01495 1 66572 32.997 26.699 1 0.58406 0.5686 0 3079300 1798900 1280400 29535 1713 11191 11495 46073 46073 RGILTLK 7 1 1 Unmodified _RGILTLK_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;POTEM;POTEJ;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.7709 2 400.771263 799.527973 92579.7 0.12302 4.9302E-05 -1.4664 -0.0005877 -1.3434 -0.0005384 400.771154123824 409.781686669579 40.609 1.1684 40.609 40.399 41.568 0 572 100 10 0 0 0 0.02692 1 21176 98.418 35.27 1 2.0269 2.4978 0 3701400000 1235700000 2465700000 29536 1624;1656;1100 11192 11496 46074 46074 RGILTLK 7 1 1 Unmodified _RGILTLK_ 0 0 1 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;C9JUM1;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q6S8J3;A5A3E0;P0CG38;L0R5C4;P0CG39;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B7Z6P1;Q53GK6;P63261 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;POTEM;POTEJ;ACTG1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 409.7827 2 400.771263 799.527973 91898.24 0.061143 2.4504E-05 -0.73663 -0.00029522 -0.67549 -0.00027072 400.771106094275 409.782190863137 44.569 2.9137 44.569 44.259 47.173 0 807 197 8 0 0 0 0.057301 1 20563 62.714 19.714 1 2.6606 2.2835 0 215820000 54732000 161090000 29537 1624;1656;1100 11192 11496 46075 46075 RGIPGLPDGR 10 0 2 Unmodified _RGIPGLPDGR_ 0 0 1 Q53SY7;F8VPD4;P27708;H7BZB3 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.2667 2 519.296165 1036.57778 84803.9 0.5927 0.00030779 0.23058 0.00011974 0.82327 0.00042752 519.29626048086 529.304733932359 44.729 0.37682 44.729 44.589 44.966 3.8147E-06 69 27 4 0 0 0 0.040566 1 24487 44.98 24.355 1 0.79501 0.83733 0 14201000 6383600 7817300 29538 1259 11193 11497 46076 46076 RGLESDVAELR 11 0 2 Unmodified _RGLESDVAELR_ 0 0 1 Q03252 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.8337 2 622.833308 1243.65206 76254.09 0.6856 0.00042702 0.63824 0.00039752 1.3238 0.00082454 622.833411300883 632.842430420271 51.69 0.60083 51.69 51.464 52.065 0 158 49 6 0 0 0 0.0051104 1 28545 60.518 23.825 1 1.1408 1.2386 0 30102000 14791000 15312000 29539 1682 11194 11498 46077 46077 RGLFDEEMNEILTDPSDDTK 20 1 1 Oxidation (M) _RGLFDEEM(ox)NEILTDPSDDTK_ RGLFDEEM(1)NEILTDPSDDTK RGLFDEEM(46.57)NEILTDPSDDTK 0 1 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.0311 3 781.021522 2340.04274 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.437 1 89.437 88.937 89.937 0 0 0 0 0.00072611 1 53996 46.569 43.992 1 29540 1754 11195 11499 46078 46078 1616 RGLFDEEMNEILTDPSDDTK 20 1 1 Oxidation (M) _RGLFDEEM(ox)NEILTDPSDDTK_ RGLFDEEM(1)NEILTDPSDDTK RGLFDEEM(45.36)NEILTDPSDDTK 0 1 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.0225 3 781.021522 2340.04274 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.11 1 88.11 87.61 88.61 0 0 0 0 0.00080442 1 54353 45.363 37.175 1 29541 1754 11195 11499 46079 46079 1616 RGNLNFTCDGNSVISPVGNR 20 0 2 Unmodified _RGNLNFTCDGNSVISPVGNR_ 0 0 1 Q15269;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.6899 3 726.355392 2176.04435 72323.82 0.65439 0.00047532 -0.68192 -0.00049531 -0.027527 -1.9995E-05 726.689201592148 733.027233978465 85.342 0.38963 85.342 85.139 85.528 0 81 25 4 0 0 0 0.0001934 1 46669 35.973 34.546 1 1.1024 1.0027 0 2564900 1362700 1202100 29542 1756 11196 11500 46080 46080 RGNLNFTCDGNSVISPVGNR 20 0 2 Unmodified _RGNLNFTCDGNSVISPVGNR_ 0 0 1 Q15269;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 726.3557 3 726.355392 2176.04435 NaN NaN NaN -0.47953 -0.00034831 NaN NaN NaN NaN 85.357 0.3179 85.357 85.198 85.516 0 0 0 0 0.016586 1 45854 28.178 19.991 1 NaN NaN 0 1290500 1290500 0 29543 1756 11196 11500 46081 46081 RGPCIIYNEDNGIIK 15 1 1 Unmodified _RGPCIIYNEDNGIIK_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.9711 3 587.969928 1760.88795 76906.27 0.53215 0.00031289 0.33486 0.00019688 0.86701 0.00050977 587.970076280116 593.977625131841 72.168 1.1081 72.168 71.704 72.812 0 574 84 10 0 0 0 9.3409E-05 2 42571 58.885 58.885 1 0.82009 0.98822 0 114550000 62225000 52323000 29544 1548 11197 11501 46082;46083 46083 RGPCIIYNEDNGIIK 15 1 1 Unmodified _RGPCIIYNEDNGIIK_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 890.4608 2 881.451253 1760.88795 64494.54 0.52392 0.00046181 0.3953 0.00034844 0.91922 0.00081025 881.953086114625 890.462822806311 72.144 0.62367 72.144 71.86 72.483 0 142 47 5 0 0 0 0.0007064 3 42048 57.836 57.836 1 0.81802 0.88063 0 11404000 6269200 5135000 29545 1548 11197 11501 46084;46085;46086 46084 RGPCIIYNEDNGIIK 15 1 1 Unmodified _RGPCIIYNEDNGIIK_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 890.9639 2 881.451253 1760.88795 65512.5 0.39591 0.00034898 -0.19789 -0.00017443 0.19802 0.00017454 881.450948822956 890.462548003962 70.197 0.48072 70.197 70.016 70.496 0 178 40 6 0 0 0 0.00037004 2 41843 65.179 65.179 1 0.80324 0.92324 0 25760000 14369000 11392000 29546 1548 11197 11501 46087;46088 46088 RGPCIIYNEDNGIIK 15 1 1 Unmodified _RGPCIIYNEDNGIIK_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.9782 3 587.969928 1760.88795 77136.63 0.56932 0.00033474 -0.16127 -9.4822E-05 0.40805 0.00023992 588.304114164325 593.977419227429 70.209 0.94978 70.209 69.872 70.821 7.6294E-06 548 77 10 0 0 0 1.2651E-15 2 41809 104.17 104.17 1 0.78917 0.93436 0 209310000 103290000 106020000 29547 1548 11197 11501 46089;46090 46090 RGPCIIYNEDNGIIK 15 1 1 Unmodified _RGPCIIYNEDNGIIK_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.9777 3 587.969928 1760.88795 77917.81 0.51808 0.00030462 -0.10182 -5.9868E-05 0.41626 0.00024475 588.304222844399 593.977461214178 81.928 1.0475 81.928 81.639 82.687 -7.6294E-06 370 62 11 0 0 0 4.7512E-05 2 44480 62.378 56.474 1 0.97216 0.85587 0 35634000 17972000 17663000 29548 1548 11197 11501 46091;46092 46092 RGPCIIYNEDNGIIK 15 1 1 Unmodified _RGPCIIYNEDNGIIK_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;Q53G74;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.9781 3 587.969928 1760.88795 78389.91 0.48442 0.00028482 -0.18296 -0.00010758 0.30146 0.00017725 587.969843236303 593.977379703392 81.939 0.77402 81.939 81.58 82.354 0 323 44 10 0 0 0 1.3191E-07 2 43567 81.619 77.559 1 0.98036 0.8333 0 29286000 14518000 14768000 29549 1548 11197 11501 46093;46094 46093 RGPFELEAFYSDPQGVPYPEAK 22 1 1 Unmodified _RGPFELEAFYSDPQGVPYPEAK_ 0 0 1 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 839.4153 3 833.072657 2496.19614 66888.31 0.54067 0.00045041 0.13147 0.00010953 0.67214 0.00055994 833.407428883813 839.414205798226 109.81 0.47369 109.81 109.61 110.09 -7.6294E-06 88 34 5 0 0 0 9.1069E-07 2 68788 49.076 49.076 1 2.3976 2.5642 0 12912000 5081400 7830300 29550 390 11198 11502 46095;46096 46095 RGPFELEAFYSDPQGVPYPEAK 22 1 1 Unmodified _RGPFELEAFYSDPQGVPYPEAK_ 0 0 1 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.4136 3 833.072657 2496.19614 67495.5 0.9351 0.00077901 0.041132 3.4266E-05 0.97623 0.00081327 833.406715064413 839.414220773765 108.97 0.43453 108.97 108.74 109.17 7.6294E-06 136 33 7 0 0 0 1.8417E-05 2 69806 37.56 34.836 1 1.7505 1.9717 0 13900000 6676400 7224000 29551 390 11198 11502 46097;46098 46097 RGPNYTSGYGTNSELSNPSETESER 25 0 2 Unmodified _RGPNYTSGYGTNSELSNPSETESER_ 0 0 1 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 918.4137 3 911.405863 2731.19576 64355.5 0.53325 0.000486 0.25784 0.000235 0.79109 0.000721 911.740635653078 918.412584039748 47.233 0.37654 47.233 47.061 47.437 3.8147E-06 131 34 6 0 0 0 1.2788E-09 1 25577 55.62 55.62 1 0.6985 0.75594 0 22544000 11759000 10785000 29552 531 11199 11503 46099 46099 RGPNYTSGYGTNSELSNPSETESER 25 0 2 Unmodified _RGPNYTSGYGTNSELSNPSETESER_ 0 0 1 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.4111 3 911.405863 2731.19576 62726.73 0.52689 0.00048021 1.0274 0.0009364 1.5543 0.0014166 911.408245757171 918.4122560554 45.816 0.41371 45.816 45.586 45.999 -3.8147E-06 192 36 8 0 0 0 1.1628E-12 3 25210 71.418 68.805 1 0.48069 0.53873 0 27156000 17790000 9366400 29553 531 11199 11503 46100;46101;46102 46101 RGPNYTSGYGTNSELSNPSETESER 25 0 2 Unmodified _RGPNYTSGYGTNSELSNPSETESER_ 0 0 1 A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 A0A0F7KYT8 A0A0F7KYT8 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 918.4128 3 911.405863 2731.19576 64131.1 0.44417 0.00040482 0.22818 0.00020797 0.67235 0.00061278 911.740400876627 918.412696147123 56.361 0.49054 56.361 56.14 56.631 3.8147E-06 168 32 8 0 0 0 0.025814 1 27711 14.653 14.653 1 0.87173 0.78178 0 2362400 1312900 1049500 29554 531 11199 11503 46103 46103 RGPQLVCTGSDDGTVK 16 1 1 Unmodified _RGPQLVCTGSDDGTVK_ 0 0 1 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.953 3 563.945671 1688.81518 79309.76 0.48852 0.0002755 -0.288 -0.00016242 0.20052 0.00011308 563.945630421322 569.953029383999 34.099 0.32729 34.099 33.937 34.264 0 159 30 8 0 0 0 0.0010081 1 16993 36.593 31.963 1 0.9684 1.0929 0 22780000 11382000 11398000 29555 643 11200 11504 46104 46104 RGPQLVCTGSDDGTVK 16 1 1 Unmodified _RGPQLVCTGSDDGTVK_ 0 0 1 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.4143 2 845.414868 1688.81518 67963.26 0.55639 0.00047038 0.33707 0.00028496 0.89345 0.00075534 845.415246186642 854.425964215482 34.12 0.22889 34.12 33.975 34.203 0 42 20 4 0 0 0 0.00044044 1 17007 56.951 56.951 1 0.85247 0.92378 0 10176000 6400500 3775000 29556 643 11200 11504 46105 46105 RGPQLVCTGSDDGTVK 16 1 1 Unmodified _RGPQLVCTGSDDGTVK_ 0 0 1 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 854.4279 2 845.414868 1688.81518 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.008 1 34.008 33.508 34.508 0 0 0 0 0.0025773 1 16962 59.57 36.194 1 29557 643 11200 11504 46106 46106 RGPQLVCTGSDDGTVK 16 1 1 Unmodified _RGPQLVCTGSDDGTVK_ 0 0 1 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.2789 3 563.945671 1688.81518 79542.25 0.26782 0.00015104 -0.09668 -5.4522E-05 0.17114 9.6515E-05 563.945621500771 569.953166300821 32.964 0.35017 32.964 32.811 33.161 0 145 33 6 0 0 0 0.00069903 1 16407 25.508 25.508 1 0.75179 0.86643 0 28453000 15550000 12903000 29558 643 11200 11504 46107 46107 RGPQLVCTGSDDGTVK 16 1 1 Unmodified _RGPQLVCTGSDDGTVK_ 0 0 1 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 854.4252 2 845.414868 1688.81518 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.043 1 33.043 32.543 33.543 0 0 0 0 0.033805 1 16488 45.257 19.871 1 29559 643 11200 11504 46108 46108 RGPQLVCTGSDDGTVK 16 1 1 Unmodified _RGPQLVCTGSDDGTVK_ 0 0 1 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.2792 3 563.945671 1688.81518 82820.65 0.44704 0.00025211 0.20118 0.00011346 0.64822 0.00036556 564.279559051561 569.953272920966 38.849 0.30701 38.849 38.68 38.987 0 83 25 5 0 0 0 0.0017141 2 17717 26.808 26.808 1 1.0273 0.88261 0 2701400 1141200 1560200 29560 643 11200 11504 46109;46110 46110 RGPQLVCTGSDDGTVK 16 1 1 Unmodified _RGPQLVCTGSDDGTVK_ 0 0 1 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.9538 3 563.945671 1688.81518 82973.52 0.2746 0.00015486 0.31153 0.00017568 0.58613 0.00033055 563.9460246193 569.953399565619 38.814 0.27986 38.814 38.665 38.945 0 80 21 5 0 0 0 0.038162 1 17165 16.123 11.492 1 0.83374 0.71858 0 2372100 1408400 963730 29561 643 11200 11504 46111 46111 RGRPAATEVK 10 1 2 Unmodified _RGRPAATEVK_ 0 0 2 O75475;Q05CM9 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 362.2124 3 362.21224 1083.61489 98384.38 -0.68029 -0.00024641 0.83418 0.00030215 0.15389 5.5741E-05 362.212506428574 371.556020585883 14.736 0.42218 14.736 14.625 15.047 0 38 12 6 0 0 0 0.016462 1 2599 50.978 35.834 1 0.54733 0.59309 0 10417000 6869000 3548400 29562 1405 11201 11505 46112 46112 RGSDYETFK 9 1 1 Unmodified _RGSDYETFK_ 0 0 1 H7C3J0;B4DKE1;Q6NUM9;I0EZ74 H7C3J0 H7C3J0 RETSAT All-trans-retinol 13,14-reductase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.7617 2 551.76182 1101.50909 NaN NaN NaN -0.40835 -0.00022531 NaN NaN NaN NaN 22.348 0.1715 22.348 22.241 22.412 0 0 0 0 0.041394 1 8382 50.04 38.135 1 NaN NaN 0 2496200 2496200 0 29563 988 11202 11506 46113 46113 RGTGGVDTAATGGVFDISNLDR 22 0 2 Unmodified _RGTGGVDTAATGGVFDISNLDR_ 0 0 1 P12532 P12532 P12532 CKMT1A Creatine kinase U-type, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.0303 3 727.029451 2178.06652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.748 1 94.748 94.248 95.248 0 0 0 0 0.00036565 1 57559 50.158 41.558 1 29564 1475 11203 11507 46114 46114 RGTGGVDTAATGGVFDISNLDR 22 0 2 Unmodified _RGTGGVDTAATGGVFDISNLDR_ 0 0 1 P12532 P12532 P12532 CKMT1A Creatine kinase U-type, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.029 3 727.029451 2178.06652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.581 1 93.581 93.081 94.081 0 0 0 0 1.4439E-08 1 58095 60.133 54.605 1 29565 1475 11203 11507 46115 46115 RGTGGVDTAAVGGVFDVSNADR 22 0 2 Unmodified _RGTGGVDTAAVGGVFDVSNADR_ 0 0 1 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3547 3 707.682163 2120.02466 NaN NaN NaN 0.2947 0.00020855 NaN NaN NaN NaN 81.4 0.82021 81.4 81.026 81.847 0 0 0 0 4.4337E-09 1 48549 68.569 59.637 1 NaN NaN 0 19811000 0 19811000 29566 557 11204 11508 46116 46116 RGTGGVDTAAVGGVFDVSNADR 22 0 2 Unmodified _RGTGGVDTAAVGGVFDVSNADR_ 0 0 1 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.6896 3 707.682163 2120.02466 74007.29 0.84283 0.00059646 0.34606 0.0002449 1.1889 0.00084136 708.016350648655 714.355161958874 79.887 0.83421 79.887 79.373 80.207 0 179 45 6 0 0 0 1.7074E-09 1 48705 82.177 72.703 1 4.5084 5.0532 0 27191000 5307200 21884000 29567 557 11204 11508 46117 46117 RGTGGVDTAAVGGVFDVSNADR 22 0 2 Unmodified _RGTGGVDTAAVGGVFDVSNADR_ 0 0 1 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.3555 3 707.682163 2120.02466 72218.16 0.70473 0.00049872 0.5618 0.00039757 1.2665 0.0008963 708.016479211878 714.354800229049 92.65 0.43816 92.65 92.408 92.846 0 64 21 5 0 0 0 8.2414E-06 1 51675 44.254 40.286 1 2.6676 2.4176 0 3018200 733580 2284600 29568 557 11204 11508 46118 46118 RGTGGVDTAAVGGVFDVSNADR 22 0 2 Unmodified _RGTGGVDTAAVGGVFDVSNADR_ 0 0 1 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;H0YJG0 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.3546 3 707.682163 2120.02466 72994.1 0.39158 0.00027712 -0.24193 -0.00017121 0.14965 0.0001059 708.016467807927 714.353804328269 92.482 0.3941 92.482 92.234 92.628 7.6294E-06 65 18 5 0 0 0 0.0011196 2 50647 26.674 23.997 1 2.9628 2.644 0 2054600 535860 1518700 29569 557 11204 11508 46119;46120 46119 RGTLSGAPAPPTR 13 0 2 Unmodified _RGTLSGAPAPPTR_ 0 0 1 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.5731 3 427.573837 1279.69968 93496.51 0.014684 6.2785E-06 0.43397 0.00018556 0.44866 0.00019183 427.573873480093 434.24614919058 26.81 0.25473 26.81 26.656 26.91 1.9073E-06 52 17 4 0 0 0 0.012164 1 12111 29.013 5.6368 1 0.87851 0.95141 0 15226000 7555600 7670800 29570 371 11205 11509 46121 46121 RGTLSGAPAPPTR 13 0 2 Unmodified _RGTLSGAPAPPTR_ 0 0 1 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.2458 3 427.573837 1279.69968 NaN NaN NaN -1.2564 -0.00053722 NaN NaN NaN NaN 26.114 0.24397 26.114 25.968 26.212 -1.9073E-06 0 0 0 0.043332 1 11577 28.089 2.0774 1 NaN NaN 0 7006400 0 7006400 29571 371 11205 11509 46122 46122 RGTQPVGSLELK 12 1 1 Unmodified _RGTQPVGSLELK_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8675 2 642.867151 1283.71975 77101.7 0.88117 0.00056648 -0.14134 -9.086E-05 0.73983 0.00047562 642.866991341599 651.878356067588 42.184 0.49324 42.184 42.01 42.503 0 132 36 5 0 0 0 0.0039277 2 22322 58.829 10.035 1 0.69345 0.80329 0 29176000 15830000 13345000 29572 44 11206 11510 46123;46124 46124 RGTQPVGSLELK 12 1 1 Unmodified _RGTQPVGSLELK_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.8788 2 642.867151 1283.71975 75802.32 0.47517 0.00030547 0.1966 0.00012639 0.67176 0.00043186 642.866997895145 651.878556707969 48.805 0.52916 48.805 48.476 49.005 -3.8147E-06 162 41 5 0 0 0 0.016453 1 23743 46.844 8.551 1 1.4807 1.2168 0 4463700 2090500 2373200 29573 44 11206 11510 46125 46125 RGTQPVGSLELK 12 1 1 Unmodified _RGTQPVGSLELK_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.8785 2 642.867151 1283.71975 76508.29 0.31406 0.0002019 0.065987 4.2421E-05 0.38005 0.00024432 642.867074963318 651.878516565185 48.765 0.6157 48.765 48.393 49.009 0 204 50 7 0 0 0 0.022482 1 23119 44.309 6.0166 1 1.5238 1.2866 0 3774400 1613300 2161100 29574 44 11206 11510 46126 46126 RGVVTLLSDYEVCK 14 1 1 Unmodified _RGVVTLLSDYEVCK_ 0 0 1 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.9632 3 546.955507 1637.84469 NaN NaN NaN -0.089109 -4.8739E-05 NaN NaN NaN NaN 98.822 0.54278 98.822 98.666 99.209 0 0 0 0 0.0046665 1 55802 46.926 41.942 1 NaN NaN 0 3155900 0 3155900 29575 302 11207 11511 46127 46127 RGVVTLLSDYEVCK 14 1 1 Unmodified _RGVVTLLSDYEVCK_ 0 0 1 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 552.9628 3 546.955507 1637.84469 NaN NaN NaN -0.26248 -0.00014356 NaN NaN NaN NaN 98.597 0.37457 98.597 98.442 98.816 0 0 0 0 0.017413 1 54834 36.345 31.361 1 NaN NaN 0 3649500 0 3649500 29576 302 11207 11511 46128 46128 RHATAEEVEEEER 13 0 2 Unmodified _RHATAEEVEEEER_ 0 0 1 Q8TDN6;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.9142 3 528.913136 1583.71758 86935.27 0.82944 0.0004387 -0.12624 -6.6771E-05 0.7032 0.00037193 528.912920423463 535.584840373958 16.979 0.23283 16.979 16.863 17.096 0 24 8 5 0 0 0 0.038418 1 4037 19.286 17.764 1 0.58965 0.57607 0 2087700 982830 1104800 29577 1934 11208 11512 46129 46129 RHQELLQK 8 1 1 Unmodified _RHQELLQK_ 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 351.2051 3 351.205085 1050.59343 102113.3 0.12481 4.3834E-05 -0.41787 -0.00014676 -0.29306 -0.00010292 351.204949745921 357.212520768901 19.161 0.29722 19.161 19.032 19.329 0 64 18 5 0 0 0 0.0098998 2 5869 47.574 25.045 1 1.0786 1.1707 0 9996900 4849500 5147400 29578 2059 11209 11513 46130;46131 46131 RHVTYVVAK 9 1 1 Unmodified _RHVTYVVAK_ 0 0 1 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 358.2135 3 358.213581 1071.61891 100344.6 0.071799 2.5719E-05 -0.14954 -5.3568E-05 -0.077744 -2.7849E-05 358.213450829328 364.221049099559 19.116 0.13893 19.116 19.025 19.164 0 23 6 5 0 0 0 0.00077793 1 5593 72.643 72.643 1 0.68744 0.76022 0 7329200 4440400 2888800 29579 1898 11210 11514 46132 46132 RIAELSEDDQK 11 1 1 Unmodified _RIAELSEDDQK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.3289 2 652.328056 1302.64156 74740.02 0.44588 0.00029086 0.084575 5.5171E-05 0.53045 0.00034603 652.328165318374 661.339321528999 23.7 0.77801 23.7 23.414 24.192 0 153 37 11 0 0 0 1.7271E-05 2 9502 108.7 66.098 1 1.1356 1.3713 0 160380000 74007000 86371000 29580 1183 11211 11515 46133;46134 46133 RIAELSEDDQK 11 1 1 Unmodified _RIAELSEDDQK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3281 2 652.328056 1302.64156 73472.13 0.43011 0.00028057 0.17094 0.00011151 0.60105 0.00039208 652.328274488921 661.339338784411 23.188 0.80418 23.188 22.965 23.77 1.9073E-06 144 33 9 0 0 0 1.7535E-65 2 9092 218.43 156.43 1 1.1347 1.3411 0 158810000 73839000 84972000 29581 1183 11211 11515 46135;46136 46136 RIAELSEDDQK 11 1 1 Unmodified _RIAELSEDDQK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.3396 2 652.328056 1302.64156 73685.64 0.45395 0.00029612 -0.076864 -5.0141E-05 0.37708 0.00024598 652.829454942669 661.339282443481 25.835 1.3099 25.835 25.474 26.784 0 192 54 9 0 0 0 4.1388E-05 1 9511 103.08 53.27 1 1.5793 1.406 0 62326000 15596000 46730000 29582 1183 11211 11515 46137 46137 RIAELSEDDQK 11 1 1 Unmodified _RIAELSEDDQK_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.3394 2 652.328056 1302.64156 73930.31 0.58989 0.0003848 -0.28565 -0.00018634 0.30424 0.00019847 652.328092725865 661.339118957854 25.793 1.2507 25.793 25.422 26.672 0 241 53 10 0 0 0 2.0238E-16 2 8968 152.64 102.83 1 1.4606 1.246 0 61733000 24266000 37467000 29583 1183 11211 11515 46138;46139 46138 RIALTDNALIAR 12 0 2 Unmodified _RIALTDNALIAR_ 0 0 1 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.9336 3 442.933254 1325.77793 91950.14 0.28568 0.00012654 0.22866 0.00010128 0.51434 0.00022782 442.933253648704 449.60556249261 71.842 0.64897 71.842 71.542 72.191 0 199 53 5 0 0 0 5.6273E-05 2 41874 72.29 60.425 1 0.99862 1.0794 0 20305000 10652000 9652800 29584 240 11212 11516 46140;46141 46140 RIALTDNALIAR 12 0 2 Unmodified _RIALTDNALIAR_ 0 0 1 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.605 3 442.933254 1325.77793 91943.88 0.072556 3.2137E-05 0.0542 2.4007E-05 0.12676 5.6144E-05 442.933211597153 449.605438043073 69.73 0.6185 69.73 69.442 70.061 7.6294E-06 210 50 6 0 0 0 4.3061E-05 1 41511 76.522 60.983 1 1.0153 1.1251 0 23278000 11339000 11939000 29585 240 11212 11516 46142 46142 RIALTDNALIAR 12 0 2 Unmodified _RIALTDNALIAR_ 0 0 1 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 442.933 3 442.933254 1325.77793 90206.17 -0.063592 -2.8167E-05 0.016631 7.3663E-06 -0.046962 -2.0801E-05 442.933206823767 449.605413065706 80.923 0.68774 80.923 80.571 81.259 0 208 44 6 0 0 0 6.0713E-05 2 43831 59.116 48.016 1 0.71343 0.60815 0 7026500 3998200 3028300 29586 240 11212 11516 46143;46144 46144 RIALTDNALIAR 12 0 2 Unmodified _RIALTDNALIAR_ 0 0 1 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 449.6057 3 442.933254 1325.77793 91487.73 0.14829 6.5684E-05 -0.067667 -2.9972E-05 0.080626 3.5712E-05 442.933106980275 449.605450782178 80.77 0.82458 80.77 80.37 81.195 0 269 58 6 0 0 0 0.041113 1 42698 14.791 13.469 1 0.76118 0.68952 0 5123200 2959200 2164100 29587 240 11212 11516 46145 46145 RIANLQTDLSDGLR 14 0 2 Unmodified _RIANLQTDLSDGLR_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 531.6288 3 524.621516 1570.84272 NaN NaN NaN 0.27237 0.00014289 NaN NaN NaN NaN 83.972 0.22308 83.972 83.835 84.058 0 0 0 0 0.022895 1 45768 33.265 27.986 1 NaN NaN 0 2301200 0 2301200 29588 1504 11213 11517 46146 46146 RIANLQTDLSDGLR 14 0 2 Unmodified _RIANLQTDLSDGLR_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.2933 3 524.621516 1570.84272 NaN NaN NaN -0.59404 -0.00031165 NaN NaN NaN NaN 83.816 0.30388 83.816 83.676 83.98 0 0 0 0 0.029724 1 44910 29.733 21.628 1 NaN NaN 0 1817400 0 1817400 29589 1504 11213 11517 46147 46147 RIDELIESGK 10 1 1 Unmodified _RIDELIESGK_ 0 0 1 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.331 2 580.319502 1158.62445 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.31 1 43.31 42.81 43.81 0 0 0 0 0.0012061 1 23159 74.944 45.471 1 29590 505 11214 11518 46148 46148 RIDELIESGK 10 1 1 Unmodified _RIDELIESGK_ 0 0 1 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.3309 2 580.319502 1158.62445 NaN NaN NaN 0.089776 5.2099E-05 NaN NaN NaN NaN 42.237 0.62127 42.237 42.039 42.66 0 0 0 0 0.0019426 1 22695 83.397 59.968 1 NaN NaN 0 16325000 0 16325000 29591 505 11214 11518 46149 46149 RIEELNK 7 1 1 Unmodified _RIEELNK_ 0 0 1 A0A024R534;O94776;E7EQY4;E7EV10;Q9BTC8;E9PCS8;Q53SC0;E9PF88;H0YIT0;E7ESY4;Q13330;H7C3F3 A0A024R534;E7EQY4;E7ESY4 A0A024R534 MTA2;MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.2586 2 451.258717 900.50288 87587.59 0.072553 3.274E-05 -0.62219 -0.00028077 -0.54964 -0.00024803 451.258377394031 460.269663605608 18.462 0.34942 18.462 18.296 18.645 0 54 13 8 0 0 0 3.0729E-26 1 5389 200.66 18.394 1 0.8282 1.0018 0 206850000 110000000 96848000 29592 168;1223;1221 11215 11519 46150 46150 RIEFAEQINK 10 1 1 Unmodified _RIEFAEQINK_ 0 0 1 Q9H307;A8K964;B4DTD4 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3533 2 624.340769 1246.66699 77145.09 0.36055 0.00022511 0.27013 0.00016865 0.63068 0.00039376 624.340631816498 633.352359375037 45.853 0.44262 45.853 45.613 46.055 3.8147E-06 136 39 5 0 0 0 0.01307 1 24657 58.699 23.254 1 1.3334 1.5704 0 34117000 16823000 17294000 29593 2028 11216 11520 46151 46151 RIEFAEQINK 10 1 1 Unmodified _RIEFAEQINK_ 0 0 1 Q9H307;A8K964;B4DTD4 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.3417 2 624.340769 1246.66699 77644.16 1.4017 0.00087513 -0.588 -0.00036711 0.81368 0.00050801 624.340245396539 633.351777602996 43.772 0.72062 43.772 43.339 44.06 0 171 57 4 0 0 0 0.0007586 2 23882 86.624 35.278 1 1.4635 1.6834 0 26509000 12571000 13938000 29594 2028 11216 11520 46152;46153 46153 RIEPAEELNSNDMK 14 1 1 Oxidation (M) _RIEPAEELNSNDM(ox)K_ RIEPAEELNSNDM(1)K RIEPAEELNSNDM(91.62)K 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 840.4065 2 831.393601 1660.77265 66296.77 0.78576 0.00065328 0.076023 6.3205E-05 0.86179 0.00071648 831.895136457294 840.405098037889 29.49 0.40947 29.49 29.381 29.791 0 75 34 5 0 0 0 0.00013754 1 14309 91.62 84.931 1 1.3627 1.4843 0 16062000 8310700 7751400 29595 1569 11217 11521 46154 46154 1335 RIEPAEELNSNDMK 14 1 1 Oxidation (M) _RIEPAEELNSNDM(ox)K_ RIEPAEELNSNDM(1)K RIEPAEELNSNDM(102.9)K 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.4056 2 831.393601 1660.77265 65124.59 0.66491 0.0005528 0.38043 0.00031628 1.0453 0.00086909 831.395350355747 840.404842263981 28.059 0.52649 28.059 27.871 28.397 0 145 28 9 0 0 0 7.6421E-06 2 13230 102.9 82.033 1 1.8317 2.1574 0 91367000 28138000 63229000 29596 1569 11217 11521 46155;46156 46155 1335 RIEPAEELNSNDMK 14 1 1 Oxidation (M) _RIEPAEELNSNDM(ox)K_ RIEPAEELNSNDM(1)K RIEPAEELNSNDM(75.32)K 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.6064 3 554.59816 1660.77265 NaN NaN NaN 0.84648 0.00046946 NaN NaN NaN NaN 28.733 0.25596 28.733 28.652 28.908 1.9073E-06 0 0 0 0.00013094 1 13746 75.316 71.012 1 NaN NaN 0 14830000 0 14830000 29597 1569 11217 11521 46157 46157 1335 RIEPAEELNSNDMK 14 1 1 Oxidation (M) _RIEPAEELNSNDM(ox)K_ RIEPAEELNSNDM(1)K RIEPAEELNSNDM(94.69)K 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.405 2 831.393601 1660.77265 NaN NaN NaN 0.30595 0.00025437 NaN NaN NaN NaN 28.779 0.60445 28.779 28.345 28.949 0 0 0 0 2.7893E-06 1 13777 94.688 85 1 NaN NaN 0 8656800 0 8656800 29598 1569 11217 11521 46158 46158 1335 RIEPAEELNSNDMK 14 1 1 Oxidation (M) _RIEPAEELNSNDM(ox)K_ RIEPAEELNSNDM(1)K RIEPAEELNSNDM(43.69)K 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.6059 3 554.59816 1660.77265 80834.44 0.21259 0.0001179 0.17881 9.9166E-05 0.3914 0.00021707 554.598290888098 560.60580145823 32.79 0.59583 32.79 32.472 33.068 0 134 31 7 0 0 0 0.0018782 1 14253 43.69 43.69 1 2.3784 2.0548 0 13828000 3520800 10307000 29599 1569 11217 11521 46159 46159 1335 RIEPAEELNSNDMK 14 1 1 Oxidation (M) _RIEPAEELNSNDM(ox)K_ RIEPAEELNSNDM(1)K RIEPAEELNSNDM(45.44)K 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.6057 3 554.59816 1660.77265 80541.29 0.50789 0.00028168 -0.19074 -0.00010578 0.31715 0.00017589 554.59821399882 560.605566089741 32.797 0.57978 32.797 32.596 33.176 0 120 31 6 0 0 0 0.0015239 1 13765 45.438 45.438 1 2.153 1.8129 0 7935600 2300000 5635500 29600 1569 11217 11521 46160 46160 1335 RIEPAEELNSNDMK 14 1 1 Oxidation (M) _RIEPAEELNSNDM(ox)K_ RIEPAEELNSNDM(1)K RIEPAEELNSNDM(42.84)K 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 840.4052 2 831.393601 1660.77265 65797 0.49217 0.00040919 -0.014329 -1.1913E-05 0.47784 0.00039728 831.393506783965 840.404768920019 33.428 0.70761 33.428 33.128 33.835 0 222 60 5 0 0 0 0.01381 1 14182 42.843 42.843 1 2.0498 1.7179 0 6096500 2063300 4033200 29601 1569 11217 11521 46161 46161 1335 RIEPAEELNSNDMK 14 1 1 Unmodified _RIEPAEELNSNDMK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.2742 3 549.266521 1644.77773 79871.16 0.31191 0.00017132 -0.45794 -0.00025153 -0.14603 -8.0211E-05 549.599980524299 555.274243259283 50.317 0.75942 50.317 50.045 50.804 0 281 62 8 0 0 0 0.0003034 1 24580 44.567 44.567 1 3.4112 2.8054 0 5091800 1464400 3627400 29602 1569 11217 11522 46162 46162 RIEPAEELNSNDMK 14 1 1 Unmodified _RIEPAEELNSNDMK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.2744 3 549.266521 1644.77773 78729.43 0.26166 0.00014372 -0.40956 -0.00022496 -0.14789 -8.1232E-05 549.265888139654 555.274061567207 50.492 0.6787 50.492 50.242 50.92 0 250 51 7 0 0 0 0.0040118 1 24134 27.496 27.385 1 3.0097 2.5204 0 5834300 1606200 4228000 29603 1569 11217 11522 46163 46163 RIEPAEELNSNDMK 14 1 1 Unmodified _RIEPAEELNSNDMK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.4069 2 823.396144 1644.77773 66721.73 0.40512 0.00033357 -0.41034 -0.00033788 -0.0052265 -4.3035E-06 823.395862770357 832.40698591518 50.475 0.57332 50.475 50.268 50.842 0 212 45 7 0 0 0 0.012964 1 24135 39.878 39.878 1 3.6126 3.0451 0 3956500 869090 3087400 29604 1569 11217 11522 46164 46164 RIGVPSATEIIK 12 1 1 Unmodified _RIGVPSATEIIK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.9006 2 642.387719 1282.76089 77894.64 0.68915 0.0004427 -0.64637 -0.00041522 0.042778 2.748E-05 642.387409863047 651.39862094869 73.007 0.62933 73.007 72.737 73.366 0 126 53 4 0 0 0 0.020514 1 42705 45.137 9.9127 1 1.2182 1.3508 0 19199000 10409000 8789500 29605 2065 11218 11523 46165 46165 RIGVPSATEIIK 12 1 1 Unmodified _RIGVPSATEIIK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3992 2 642.387719 1282.76089 77444.79 0.75772 0.00048675 -0.17784 -0.00011424 0.57988 0.00037251 642.387654758688 651.398708090052 70.815 0.7404 70.815 70.456 71.197 0 251 55 6 0 0 0 0.00049843 2 42295 73.067 27.906 1 1.1398 1.3158 0 30282000 13516000 16766000 29606 2065 11218 11523 46166;46167 46167 RIGVPSATEIIK 12 1 1 Unmodified _RIGVPSATEIIK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3997 2 642.387719 1282.76089 75434.45 0.58367 0.00037494 0.0033486 2.1511E-06 0.58701 0.00037709 642.387705616471 651.398922278201 82.599 0.91294 82.599 82.211 83.124 -7.6294E-06 333 55 8 0 0 0 0.0021327 2 44794 61.56 16.441 1 1.148 1.0056 0 27611000 13186000 14425000 29607 2065 11218 11523 46168;46169 46168 RIGVPSATEIIK 12 1 1 Unmodified _RIGVPSATEIIK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 434.6014 3 428.594238 1282.76089 90808.05 -0.24412 -0.00010463 0.17573 7.5319E-05 -0.068391 -2.9312E-05 428.594226576331 434.601812209715 82.596 0.60415 82.596 82.298 82.902 0 168 38 6 0 0 0 0.02748 1 44905 16.725 13.538 1 1.0995 0.94629 0 2673200 1064000 1609200 29608 2065 11218 11523 46170 46170 RIGVPSATEIIK 12 1 1 Unmodified _RIGVPSATEIIK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.3992 2 642.387719 1282.76089 74673.52 0.48612 0.00031228 0.056151 3.6071E-05 0.54228 0.00034835 642.387665717622 651.398953528231 82.485 1.1344 82.485 82.029 83.164 0 337 66 8 0 0 0 0.0028172 1 43895 60.518 15.357 1 1.1697 0.99237 0 19749000 9139200 10610000 29609 2065 11218 11523 46171 46171 RIGVPSATEIIK 12 1 1 Unmodified _RIGVPSATEIIK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 434.6015 3 428.594238 1282.76089 92040.34 -0.37427 -0.00016041 0.2906 0.00012455 -0.083668 -3.5859E-05 428.594287103928 434.601794074592 82.473 0.59228 82.473 82.18 82.772 0 126 34 5 0 0 0 0.048629 1 43980 14.942 12.701 1 1.2397 1.0703 0 2111200 904740 1206400 29610 2065 11218 11523 46172 46172 RIIDDSEITK 10 1 1 Unmodified _RIIDDSEITK_ 0 0 1 F5H6P7;A0A023T6R1;P61326;Q96A72;F5H3U9;F5H6N1 F5H6P7 F5H6P7 MAGOHB;FLJ10292;MAGOH Protein mago nashi homolog;Protein mago nashi homolog 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.3362 2 595.324785 1188.63502 NaN NaN NaN 0.15865 9.4446E-05 NaN NaN NaN NaN 35.874 0.50395 35.874 35.563 36.067 0 0 0 0 0.0012898 1 18068 86.898 46.831 1 NaN NaN 0 11669000 0 11669000 29611 3 11219 11524 46173 46173 RIIDDSEITK 10 1 1 Unmodified _RIIDDSEITK_ 0 0 1 F5H6P7;A0A023T6R1;P61326;Q96A72;F5H3U9;F5H6N1 F5H6P7 F5H6P7 MAGOHB;FLJ10292;MAGOH Protein mago nashi homolog;Protein mago nashi homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.3363 2 595.324785 1188.63502 79730.4 0.90432 0.00053837 -0.15685 -9.3379E-05 0.74747 0.00044499 595.324611295792 604.33591949506 34.216 0.3736 34.216 34.086 34.46 0 74 24 5 0 0 0 2.3816E-05 1 17256 102.06 61.032 1 1.3855 1.5903 0 24480000 7796900 16683000 29612 3 11219 11524 46174 46174 RILELDQFK 9 1 1 Unmodified _RILELDQFK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.8369 2 581.334956 1160.65536 80480.09 0.34257 0.00019915 0.33328 0.00019375 0.67585 0.00039289 581.335100585874 590.346326345752 72.352 1.1958 72.352 71.776 72.972 0 418 90 7 0 0 0 0.0069262 3 42264 79.474 53.09 1 0.40589 0.48891 0 107570000 74447000 33118000 29613 82 11220 11525 46175;46176;46177 46177 RILELDQFK 9 1 1 Unmodified _RILELDQFK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.335 2 581.334956 1160.65536 79693.38 0.61437 0.00035715 -0.17677 -0.00010276 0.43759 0.00025439 581.334805363275 590.34605186235 69.943 1.112 69.943 69.453 70.564 0 504 91 8 0 0 0 0.00057544 3 41646 113.71 74.744 1 0.4048 0.48015 0 280670000 202680000 77994000 29614 82 11220 11525 46178;46179;46180 46179 RILEPDDFLDDLDDEDYEEDTPK 23 1 1 Unmodified _RILEPDDFLDDLDDEDYEEDTPK_ 0 0 1 A0A024R582;J3KMZ8;Q92785 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 933.748 3 933.07853 2796.21376 67809.48 0.64716 0.00060385 0.50297 0.00046931 1.1501 0.0010732 933.412807600925 939.421747404732 115.55 0.44691 115.55 115.39 115.84 0 66 30 5 0 0 0 0.001098 1 73624 25.221 25.052 1 0.86239 0.96115 0 7355400 3514900 3840500 29615 174 11221 11526 46181 46181 RILGLLENF 9 0 1 Unmodified _RILGLLENF_ 0 0 1 A0A087WUB9;Q8WYA6 A0A087WUB9 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.8189 2 537.818941 1073.62333 85046.18 0.99516 0.00053521 -1.3421 -0.0007218 -0.34692 -0.00018658 537.818703162568 542.822689475322 117.17 0.54833 117.17 116.89 117.44 0 102 39 5 0 0 0 0.026269 2 74816 54.549 49.815 1 0.84176 0.89176 0 3871300 2291900 1579400 29616 409 11222 11527 46182;46183 46182 RILGLLENF 9 0 1 Unmodified _RILGLLENF_ 0 0 1 A0A087WUB9;Q8WYA6 A0A087WUB9 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.8187 2 537.818941 1073.62333 85344.23 0.72833 0.00039171 -0.38243 -0.00020568 0.3459 0.00018603 537.818766136815 542.822815693897 116.32 0.5356 116.32 116.01 116.55 0 96 33 4 0 0 0 0.0036378 2 75989 75.854 69.405 1 0.91842 0.92329 0 6622700 3795700 2827100 29617 409 11222 11527 46184;46185 46185 RINPPLAK 8 1 1 Unmodified _RINPPLAK_ 0 0 1 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 303.5272 3 303.527388 907.560336 109428 0.35771 0.00010857 -0.40227 -0.0001221 -0.044556 -1.3524E-05 303.527268103636 309.534709472814 25.078 0.305 25.078 24.88 25.185 0 35 11 4 0 0 0 0.0029257 2 10715 60.682 39.154 1 1.039 1.1692 0 13524000 6187200 7336800 29618 503 11223 11528 46186;46187 46187 RINPPLAK 8 1 1 Unmodified _RINPPLAK_ 0 0 1 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.7872 2 454.787444 907.560336 89426.17 0.27493 0.00012503 0.16249 7.39E-05 0.43742 0.00019893 454.787451714399 463.798632378991 25.079 0.3389 25.079 24.88 25.219 1.9073E-06 60 12 6 0 0 0 0.0017379 1 10723 113.1 64.928 1 1.2943 1.5121 0 48881000 20414000 28467000 29619 503 11223 11528 46188 46188 RINPPLAK 8 1 1 Unmodified _RINPPLAK_ 0 0 1 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 454.7877 2 454.787444 907.560336 87824.7 0.2599 0.0001182 0.068867 3.132E-05 0.32877 0.00014952 454.78739988513 463.798588064386 27.835 0.52963 27.835 27.554 28.084 1.9073E-06 93 21 7 0 0 0 0.046845 1 10928 53.554 25.448 1 1.1834 0.99702 0 7481200 3434800 4046500 29620 503 11223 11528 46189 46189 RINVELSTK 9 1 1 Unmodified _RINVELSTK_ 0 0 1 A0A0S2Z4Z0;Q96PK6;Q59GV2;A0A0S2Z567 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.3123 2 530.31148 1058.60841 83219.15 0.78834 0.00041807 1.0897 0.00057788 1.878 0.00099594 530.311376014239 539.323586988658 35.555 0.53306 35.555 35.453 35.986 3.8147E-06 149 50 6 0 0 0 4.2476E-05 2 17889 113.62 32.326 1 1.4089 1.694 0 81117000 31515000 49602000 29621 571 11224 11529 46190;46191 46190 RINVELSTK 9 1 1 Unmodified _RINVELSTK_ 0 0 1 A0A0S2Z4Z0;Q96PK6;Q59GV2;A0A0S2Z567 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.3234 2 530.31148 1058.60841 82012.03 0.732 0.00038819 -0.30369 -0.00016105 0.4283 0.00022713 530.311224224876 539.322573359443 34.235 0.40567 34.235 33.971 34.376 0 114 27 6 0 0 0 0.0074235 1 17252 69.275 15.501 1 1.3773 1.6213 0 83755000 35784000 47971000 29622 571 11224 11529 46192 46192 RIPEEILGK 9 1 1 Unmodified _RIPEEILGK_ 0 0 1 P36507;Q7Z370;G5E9C7 P36507 P36507 MAP2K2;DKFZp686L02273 Dual specificity mitogen-activated protein kinase kinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.8279 2 527.816399 1053.61824 84342.56 0.72522 0.00038278 -0.19458 -0.0001027 0.53064 0.00028008 527.81636853674 536.827441138778 48.167 0.66465 48.167 47.919 48.583 0 108 46 4 0 0 0 0.021876 1 26850 56.916 42.913 1 2.1029 2.4137 0 24453000 6045500 18407000 29623 1547 11225 11530 46193 46193 RIQDPTEDAEAEDTPR 16 0 2 Unmodified _RIQDPTEDAEAEDTPR_ 0 0 1 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.6263 3 614.953659 1841.83915 78969.14 0.36266 0.00022302 0.32146 0.00019768 0.68412 0.0004207 614.953426660864 621.626022922799 38.654 0.41711 38.654 38.389 38.806 3.8147E-06 92 28 5 0 0 0 0.00021904 1 17613 33.083 31.503 1 1.6599 1.5165 0 2046300 955690 1090600 29624 1435 11226 11531 46194 46194 RIQDPTEDAEAEDTPRK 17 1 2 Unmodified _RIQDPTEDAEAEDTPRK_ 0 0 2 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.9953 3 657.65198 1969.93411 74156.59 0.26237 0.00017255 -0.078989 -5.1947E-05 0.18338 0.0001206 657.986341258538 666.995596135482 27.706 0.45931 27.706 27.48 27.939 0 99 19 8 0 0 0 0.0013366 1 10338 41.257 41.257 1 1.8214 1.8103 0 1974800 729300 1245500 29625 1435 11227 11532 46195 46195 RISAVSVAER 10 0 2 Unmodified _RISAVSVAER_ 0 0 1 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3143 2 544.314554 1086.61456 81293.9 0.53112 0.0002891 -0.21057 -0.00011462 0.32056 0.00017448 544.314323391184 554.322737267108 27.828 0.43663 27.828 27.669 28.106 0 138 29 8 0 0 0 0.0004811 1 12914 91.215 61.742 1 1.1932 1.3046 0 300850000 127710000 173140000 29626 1691 11228 11533 46196 46196 RISAVSVAER 10 0 2 Unmodified _RISAVSVAER_ 0 0 1 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.3165 2 544.314554 1086.61456 79823.52 1.107 0.00060256 0.19682 0.00010713 1.3038 0.00070969 544.314714300777 554.322906028568 26.853 0.53786 26.853 26.701 27.239 0 102 25 8 0 0 0 0.013906 2 12242 56.258 15.688 1 1.3471 1.6231 0 353950000 150620000 203330000 29627 1691 11228 11533 46197;46198 46197 RISAVSVAQR 10 0 2 Unmodified _RISAVSVAQR_ 0 0 1 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.8309 2 543.822547 1085.63054 81033.67 0.66536 0.00036184 -0.27675 -0.00015051 0.38861 0.00021134 543.822236682154 553.830658319682 25.333 0.34634 25.333 25.214 25.56 0 62 18 6 0 0 0 0.040423 1 10946 45.161 15.688 1 1.1789 1.2802 0 31677000 13852000 17825000 29628 122 11229 11534 46199 46199 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.8732 2 668.864608 1335.71466 73203.23 0.69856 0.00046724 -0.018044 -1.2069E-05 0.68051 0.00045517 668.864708657751 678.872776480196 49.91 0.65921 49.91 49.847 50.506 0 537 62 10 0 0 0 0.024833 1 27734 46.64 9.1648 1 0.63657 0.70067 0 2818300000 1725300000 1093000000 29629 828 11230 11535 46200 46200 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2453 3 446.245498 1335.71466 89080.94 0.24752 0.00011045 -0.18328 -8.1789E-05 0.064236 2.8665E-05 446.245442103135 452.917567829209 51.6 0.50444 51.6 51.431 51.936 0 165 40 7 0 0 0 0.037739 1 28654 21.039 21.039 1 0.66196 0.72304 0 218960000 126530000 92426000 29630 828 11230 11535 46201 46201 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2469 3 446.245498 1335.71466 88159.26 0.10445 4.6609E-05 -0.59294 -0.0002646 -0.48849 -0.00021799 446.24600674818 452.91725203233 53.383 3.0912 53.383 52.659 55.75 0 1951 260 11 0 0 0 1.9768E-05 6 30318 83.182 69.373 1 0.68244 0.75305 0 6493300000 3826900000 2666400000 29631 828 11230 11535 46202;46203;46204;46205;46206;46207 46205 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8653 2 668.864608 1335.71466 73075.88 0.64109 0.00042881 -0.33378 -0.00022326 0.30731 0.00020555 668.86489817614 678.872436597645 53.426 2.5477 53.426 52.75 55.298 0 2065 212 12 0 0 0 9.2192E-23 7 30901 169.21 115.43 1 0.66419 0.73367 0 9157500000 5473600000 3683800000 29632 828 11230 11535 46208;46209;46210;46211;46212;46213;46214 46214 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.874 2 668.864608 1335.71466 73998.18 0.73823 0.00049378 0.16094 0.00010765 0.89917 0.00060142 668.864679329719 678.872918044608 55.348 4.0181 55.348 55.298 59.316 0 1579 329 6 0 0 0 2.5414E-06 10 31163 112.13 81.561 1 0.62565 0.68656 0 1024000000 609470000 414490000 29633 828 11230 11535 46215;46216;46217;46218;46219;46220;46221;46222;46223;46224 46215 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.9178 3 446.245498 1335.71466 89565.35 0.034911 1.5579E-05 0.45444 0.00020279 0.48936 0.00021837 446.245343959745 452.918211504178 63.25 0.76639 63.25 62.937 63.703 0 160 74 4 0 0 0 0.014032 1 36228 27.098 27.098 1 0.6709 0.72325 0 16417000 7013300 9403400 29634 828 11230 11535 46225 46225 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.2521 3 446.245498 1335.71466 89565.34 0.24353 0.00010867 0.40095 0.00017892 0.64448 0.00028759 446.245759169787 452.917778545094 63.699 0.42268 63.699 63.556 63.979 0 106 42 4 0 0 0 0.0058306 1 36586 34.264 25.751 1 0.76781 0.82894 0 18514000 10870000 7644000 29635 828 11230 11535 46226 46226 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.9174 3 446.245498 1335.71466 90709.59 -0.12093 -5.3966E-05 0.071518 3.1915E-05 -0.049415 -2.2051E-05 446.245495803446 452.917556602627 66.97 0.64162 66.97 66.636 67.278 -7.6294E-06 103 47 4 0 0 0 0.010795 1 38602 27.967 20.602 1 0.44582 0.49112 0 11762000 7151300 4610700 29636 828 11230 11535 46227 46227 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.9173 3 446.245498 1335.71466 90415.21 -0.11218 -5.0061E-05 -0.8653 -0.00038614 -0.97748 -0.0004362 446.245353589354 452.917004212227 69.984 0.48276 69.984 69.733 70.216 0 68 30 4 0 0 0 0.037569 1 40761 17.117 17.117 1 2.2047 2.4456 0 10410000 3821800 6588300 29637 828 11230 11535 46228 46228 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2455 3 446.245498 1335.71466 NaN NaN NaN 0.034588 1.5435E-05 NaN NaN NaN NaN 49.738 1.1327 49.738 49.373 50.506 3.8147E-06 0 0 0 0.0033007 2 27171 48.998 17.155 1 NaN NaN 0 6546600000 6546600000 0 29638 828 11230 11535 46229;46230 46229 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.9174 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.374 1 55.374 54.874 55.874 0 0 0 0 0.0020578 1 31127 65.563 50.023 1 29639 828 11230 11535 46231 46231 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.918 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.483 1 56.483 55.983 56.983 -3.8147E-06 0 0 0 1.6858E-05 1 31808 85.845 64.544 1 29640 828 11230 11535 46232 46232 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.9177 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.353 1 57.353 56.853 57.853 3.8147E-06 0 0 0 0.00028363 1 32387 73.435 57.896 1 29641 828 11230 11535 46233 46233 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.9171 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.248 1 58.248 57.748 58.748 3.8147E-06 0 0 0 0.014461 1 33013 47.991 34.873 1 29642 828 11230 11535 46234 46234 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.9194 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.131 1 62.131 61.631 62.631 -3.8147E-06 0 0 0 0.025069 1 35644 42.809 27.666 1 29643 828 11230 11535 46235 46235 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2464 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.172 1 64.172 63.672 64.672 7.6294E-06 0 0 0 0.026881 1 36853 34.264 18.725 1 29644 828 11230 11535 46236 46236 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.5794 3 446.245498 1335.71466 89565.37 0.158 7.0508E-05 0.68475 0.00030557 0.84275 0.00037607 446.245642385862 452.918052355887 59.97 0.87735 59.97 59.553 60.431 0 207 75 4 0 0 0 0.014012 1 33990 34.386 23.285 1 0.67059 0.72832 0 33267000 17578000 15689000 29645 828 11230 11535 46237 46237 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2586 3 446.245498 1335.71466 91005.81 -0.10598 -4.7294E-05 -0.00066776 -2.9799E-07 -0.10665 -4.7592E-05 446.245429532629 452.917666178688 68.505 0.2709 68.505 68.36 68.631 0 95 25 5 0 0 0 0.037131 1 39760 21.55 21.55 1 0.64694 0.71871 0 9722400 5596700 4125700 29646 828 11230 11535 46238 46238 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.2586 3 446.245498 1335.71466 93561.17 0.0066032 2.9466E-06 0.84971 0.00037918 0.85631 0.00038213 446.245567541814 452.917648485964 68.839 0.72833 68.839 68.547 69.275 0 141 62 6 0 0 0 0.037131 1 39760 21.55 21.55 1 0.59765 0.64786 0 15007000 9606000 5400800 29647 828 11230 11535 46239 46239 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.8651 2 668.864608 1335.71466 72750.4 0.50652 0.0003388 -0.23385 -0.00015642 0.27267 0.00018238 668.864647232525 678.872608356854 47.87 1.3473 47.87 47.55 48.898 0 666 99 11 0 0 0 0.014845 1 27072 50.034 50.034 1 0.67314 0.86695 0 4768400000 2634700000 2133700000 29648 828 11230 11535 46240 46240 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.8658 2 668.864608 1335.71466 72805.18 0.6781 0.00045356 -0.43758 -0.00029268 0.24052 0.00016087 668.865393470581 678.872249879603 50.683 1.332 50.683 50.156 51.488 3.8147E-06 1036 113 11 0 0 0 1.2537E-09 4 28654 126.19 77.4 1 0.68694 0.90777 0 13009000000 7686800000 5321800000 29649 828 11230 11535 46241;46242;46243;46244 46242 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.8654 2 668.864608 1335.71466 72805.2 0.45491 0.00030427 -0.11093 -7.4197E-05 0.34398 0.00023008 668.86470522723 678.872689138542 51.524 2.9765 51.524 51.315 54.292 3.8147E-06 1227 244 11 0 0 0 0.00049772 5 30296 88.596 53.852 1 0.62459 0.79727 0 3366500000 2075300000 1291200000 29650 828 11230 11535 46245;46246;46247;46248;46249 46247 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.865 2 668.864608 1335.71466 73089.91 0.65835 0.00044034 0.58774 0.00039312 1.2461 0.00083346 668.864762712144 678.873605581667 54.306 0.94044 54.306 54.063 55.003 0 239 80 5 0 0 0 0.008239 1 31174 57.149 26.585 1 0.63419 0.73285 0 69378000 48107000 21272000 29651 828 11230 11535 46250 46250 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.2455 3 446.245498 1335.71466 89653.82 0.077428 3.4552E-05 0.1047 4.6722E-05 0.18213 8.1274E-05 446.245459203064 452.917787363834 56.602 2.2722 56.602 55.955 58.227 3.8147E-06 389 177 4 0 0 0 0.0018385 1 33147 45.257 40.277 1 0.60892 0.69033 0 32925000 18936000 13989000 29652 828 11230 11535 46251 46251 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.2454 3 446.245498 1335.71466 89839.42 0.043527 1.9424E-05 0.35491 0.00015838 0.39843 0.0001778 446.245624486523 452.917730019894 63.842 0.6243 63.842 63.613 64.237 0 137 58 4 0 0 0 0.038041 1 37778 16.223 10.037 1 0.69718 0.71802 0 12273000 5977700 6295400 29653 828 11230 11535 46252 46252 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.9172 3 446.245498 1335.71466 91080.2 0.13438 5.9968E-05 -0.80615 -0.00035974 -0.67177 -0.00029977 446.245339726039 452.917042667681 68.23 0.70275 68.23 67.854 68.557 0 140 57 4 0 0 0 0.013877 1 40408 27.664 21.821 1 1.0851 1.1619 0 15814000 5411400 10402000 29654 828 11230 11535 46253 46253 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.2476 3 446.245498 1335.71466 NaN NaN NaN 0.026262 1.1719E-05 NaN NaN NaN NaN 50.684 6.5509 50.684 50.174 56.725 -3.8147E-06 0 0 0 7.4184E-06 8 28625 88.187 61.649 1 NaN NaN 0 5723800000 5723800000 0 29655 828 11230 11535 46254;46255;46256;46257;46258;46259;46260;46261 46254 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.9179 3 446.245498 1335.71466 NaN NaN NaN 0.68393 0.0003052 NaN NaN NaN NaN 55.279 0.63911 55.279 54.981 55.62 0 0 0 0 0.0033504 1 31728 55.776 39.886 1 NaN NaN 0 21519000 0 21519000 29656 828 11230 11535 46262 46262 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.2452 3 446.245498 1335.71466 NaN NaN NaN -0.043925 -1.9601E-05 NaN NaN NaN NaN 96.168 0.1226 96.168 96.09 96.212 0 0 0 0 0.051683 1 59974 21.775 13.375 1 NaN NaN 0 1814900 1814900 0 29657 828 11230 11535 46263 46263 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.9172 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.596 1 51.596 51.096 52.096 -3.8147E-06 0 0 0 0.00028363 1 29289 73.435 57.896 1 29658 828 11230 11535 46264 46264 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.9177 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.392 1 52.392 51.892 52.892 0 0 0 0 0.012262 1 29859 50.207 40.674 1 29659 828 11230 11535 46265 46265 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.9178 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.151 1 53.151 52.651 53.651 3.8147E-06 0 0 0 0.002603 1 30406 64.121 48.231 1 29660 828 11230 11535 46266 46266 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.2452 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.079 1 58.079 57.579 58.579 0 0 0 0 0.036063 1 33694 30.336 20.511 1 29661 828 11230 11535 46267 46267 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.8732 2 668.864608 1335.71466 72880.51 0.4816 0.00032212 -0.44447 -0.00029729 0.037123 2.483E-05 668.865268755779 678.872313760139 60.349 9.5815 60.349 59.616 69.198 0 4109 731 11 0 0 0 3.9801E-12 11 31223 140.14 106.76 1 0.69465 0.51758 0 1238100000 700250000 537810000 29662 828 11230 11535 46268;46269;46270;46271;46272;46273;46274;46275;46276;46277;46278 46271 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 446.2461 3 446.245498 1335.71466 88158.38 -0.0058219 -2.598E-06 -0.59826 -0.00026697 -0.60408 -0.00026957 446.246114314373 452.917245754683 60.319 8.4388 60.319 59.477 67.915 0 3638 650 11 0 0 0 0.00011701 16 31202 64.121 55.608 1 0.68639 0.51719 0 804410000 452480000 351930000 29663 828 11230 11535 46279;46280;46281;46282;46283;46284;46285;46286;46287;46288;46289;46290;46291;46292;46293;46294 46281 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 446.2458 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.639 1 68.639 68.139 69.139 0 0 0 0 0.031368 1 35893 32.439 22.927 1 29664 828 11230 11535 46295 46295 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.8647 2 668.864608 1335.71466 73244.28 0.46418 0.00031047 -0.45425 -0.00030383 0.009931 6.6425E-06 668.86523697621 678.872313593344 60.433 9.5975 60.433 59.35 68.947 3.8147E-06 4283 737 11 0 0 0 0.0032572 11 31974 63.624 37.686 1 0.69791 0.68787 0 1244700000 714140000 530590000 29665 828 11230 11535 46296;46297;46298;46299;46300;46301;46302;46303;46304;46305;46306 46302 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 452.9176 3 446.245498 1335.71466 88274.77 -0.033749 -1.5061E-05 -0.53475 -0.00023863 -0.5685 -0.00025369 446.24603281569 452.917358211115 60.365 10.026 60.365 59.613 69.64 3.8147E-06 3760 762 10 0 0 0 0.00035315 21 31539 57.802 46.589 1 0.69279 0.67676 0 696470000 389240000 307230000 29666 828 11230 11535 46307;46308;46309;46310;46311;46312;46313;46314;46315;46316;46317;46318;46319;46320;46321;46322;46323;46324;46325;46326;46327 46314 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 452.9185 3 446.245498 1335.71466 92644.7 -0.16337 -7.2903E-05 0.80511 0.00035928 0.64174 0.00028637 446.245473897454 452.918455860236 72.469 0.42975 72.469 72.3 72.73 0 75 38 4 0 0 0 0.061953 1 37422 13.137 13.137 1 0.84619 0.76099 0 2556500 1182800 1373600 29667 828 11230 11535 46328 46328 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 446.2462 3 446.245498 1335.71466 92410.87 0.033169 1.4801E-05 0.015225 6.7939E-06 0.048393 2.1595E-05 446.245552792343 452.917655420268 74.079 1.0419 74.079 73.725 74.767 0 175 71 5 0 0 0 0.034947 2 38296 16.57 16.57 1 0.68663 0.61605 0 2392200 1312900 1079300 29668 828 11230 11535 46329;46330 46329 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 452.9179 3 446.245498 1335.71466 93776.3 0.36533 0.00016302 -0.13993 -6.2442E-05 0.2254 0.00010058 446.245162555413 452.917722017503 145.39 0.33528 145.39 145.35 145.68 0 43 22 5 0 0 0 0.034955 1 84674 19.394 17.028 1 2.1714 1.9522 0 2533800 1641600 892210 29669 828 11230 11535 46331 46331 RISICSSDK 9 1 1 Unmodified _RISICSSDK_ 0 0 1 Q6IT96;Q13547;B5BU61;B4DRG0;Q5HYD4 Q6IT96 Q6IT96 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.2719 2 533.271498 1064.52844 79826.97 0.5066 0.00027016 0.29761 0.0001587 0.80421 0.00042886 533.271906878551 542.282625814066 20.466 0.28839 20.466 20.28 20.569 0 49 9 7 0 0 0 1.8155E-05 2 6758 126.29 90.937 1 0.70502 0.82381 0 49240000 27424000 21816000 29670 1715 11231 11536 46332;46333 46332 RISTITALGHEGK 13 1 1 Unmodified _RISTITALGHEGK_ 0 0 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 467.6037 3 461.596531 1381.76776 92550.91 0.22006 0.00010158 -0.30911 -0.00014269 -0.089055 -4.1107E-05 461.596339801838 467.603841967664 37.475 0.33788 37.475 37.293 37.631 0 60 24 4 0 0 0 0.046954 1 16835 11.099 9.9517 1 0.96233 0.87848 0 1602800 715270 887560 29671 1991 11232 11537 46334 46334 RITADQALK 9 1 1 Unmodified _RITADQALK_ 0 0 1 Q5SWX3;A8K6N9;A0A0A0MS52;A0A0A0MT11;Q13555;H0Y6G2;Q8WU40;B3KY86;B3KTH7 Q5SWX3 Q5SWX3 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.2994 2 508.298373 1014.58219 NaN NaN NaN -0.019444 -9.8833E-06 NaN NaN NaN NaN 22.727 0.30085 22.727 22.563 22.864 1.9073E-06 0 0 0 0.020239 1 8674 58.981 13.899 1 NaN NaN 0 4582400 4582400 0 29672 475 11233 11538 46335 46335 RITNEQEETYSLSQSSGK 18 1 1 Unmodified _RITNEQEETYSLSQSSGK_ 0 0 1 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.0009 3 686.330907 2055.97089 NaN NaN NaN 0.52927 0.00036325 NaN NaN NaN NaN 33.958 0.18173 33.958 33.884 34.066 0 0 0 0 0.00022594 1 16963 39.387 29.65 1 NaN NaN 0 4840700 4840700 0 29673 1795 11234 11539 46336 46336 RITNEQEETYSLSQSSGK 18 1 1 Unmodified _RITNEQEETYSLSQSSGK_ 0 0 1 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.3378 3 686.330907 2055.97089 72718.63 0.2901 0.0001991 0.098333 6.7489E-05 0.38843 0.00026659 686.6651097232 692.338525108603 39.373 0.46056 39.373 39.186 39.646 -3.8147E-06 185 35 7 0 0 0 0.00071671 3 17923 35.421 35.421 1 2.2226 1.8232 0 4900000 1608500 3291500 29674 1795 11234 11539 46337;46338;46339 46337 RITNEQEETYSLSQSSGK 18 1 1 Unmodified _RITNEQEETYSLSQSSGK_ 0 0 1 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.3387 3 686.330907 2055.97089 73451.77 0.28819 0.00019779 0.13317 9.14E-05 0.42136 0.00028919 686.330982791803 692.338616192867 39.448 0.55828 39.448 39.25 39.808 0 203 43 8 0 0 0 1.7833E-05 2 17495 51.611 47.831 1 2.1024 1.7691 0 4346000 1197200 3148800 29675 1795 11234 11539 46340;46341 46340 RIVEQDTMPPK 11 1 1 Oxidation (M) _RIVEQDTM(ox)PPK_ RIVEQDTM(1)PPK RIVEQDTM(77.66)PPK 0 1 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010;B4E132 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.3566 2 665.345194 1328.67584 75396.47 0.43028 0.00028629 0.58284 0.00038779 1.0131 0.00067407 665.345008251093 674.356899992529 20.333 0.47723 20.333 20.205 20.682 0 59 20 5 0 0 0 0.0010351 1 6775 77.662 77.662 1 2.5432 2.8312 0 19950000 5309700 14640000 29676 522 11235 11540 46342 46342 382 RIVEQDTMPPK 11 1 1 Oxidation (M) _RIVEQDTM(ox)PPK_ RIVEQDTM(1)PPK RIVEQDTM(67.21)PPK 0 1 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010;B4E132 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.3568 2 665.345194 1328.67584 72398.27 0.30969 0.00020605 0.77663 0.00051673 1.0863 0.00072277 665.847484573498 674.356939562314 20.331 0.40669 20.331 20.043 20.45 0 59 13 5 0 0 0 0.0034076 1 6455 67.207 56.377 1 2.1377 2.4366 0 19918000 6616500 13301000 29677 522 11235 11540 46343 46343 382 RKGDEVDGVDEVAK 14 2 1 Unmodified _RKGDEVDGVDEVAK_ 0 0 2 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2586 3 506.258243 1515.7529 84117.59 0.065855 3.334E-05 -0.17332 -8.7744E-05 -0.10746 -5.4405E-05 506.2581514388 514.937033191403 24.788 0.49407 24.788 24.594 25.088 0 145 25 7 0 0 0 0.00010304 1 10456 66.387 66.387 1 0.57023 0.68062 0 51669000 32389000 19280000 29678 139 11236 11541 46344 46344 RKGDEVDGVDEVAK 14 2 1 Unmodified _RKGDEVDGVDEVAK_ 0 0 2 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.9028 2 758.883726 1515.7529 69722.54 0.25557 0.00019394 0.017248 1.3089E-05 0.27281 0.00020703 758.883786208438 771.902215568628 24.787 0.23132 24.787 24.668 24.899 0 39 11 5 0 0 0 0.0016082 2 10476 67.153 49.717 1 0.44513 0.53131 0 13445000 8438600 5006600 29679 139 11236 11541 46345;46346 46345 RKGDEVDGVDEVAK 14 2 1 Unmodified _RKGDEVDGVDEVAK_ 0 0 2 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.2584 3 506.258243 1515.7529 82376.31 0.11694 5.9203E-05 -0.32409 -0.00016407 -0.20715 -0.00010487 506.258239605157 514.937052421127 23.182 0.50128 23.182 22.965 23.467 -1.9073E-06 116 22 10 0 0 0 6.2123E-06 1 9016 79.346 70.526 1 0.74682 0.9632 0 101810000 62599000 39209000 29680 139 11236 11541 46347 46347 RKGDEVDGVDEVAK 14 2 1 Unmodified _RKGDEVDGVDEVAK_ 0 0 2 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.8837 2 758.883726 1515.7529 68872.2 0.36403 0.00027626 -1.5465 -0.0011736 -1.1824 -0.00089734 758.883670887522 771.902176836535 23.141 0.3202 23.141 22.994 23.314 0 49 13 6 0 0 0 1.305E-05 2 9060 107.53 88.286 1 0.4539 0.58541 0 22915000 14101000 8814500 29681 139 11236 11541 46348;46349 46348 RKPSTSDDSDSNFEK 15 2 1 Unmodified _RKPSTSDDSDSNFEK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.6091 3 571.595584 1711.76492 80277.94 0.55387 0.00031659 -0.37194 -0.0002126 0.18194 0.000104 571.595135702972 580.274359964142 15.826 0.59985 15.826 15.625 16.225 0 167 34 8 0 0 0 0.0041307 2 3338 36.029 36.029 1 0.84066 1.0034 0 7732000 3780300 3951700 29682 1471 11237 11542 46350;46351 46351 RKPSTSDDSDSNFEK 15 2 1 Unmodified _RKPSTSDDSDSNFEK_ 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.9418 3 571.595584 1711.76492 80335.34 0.22222 0.00012702 -0.90308 -0.0005162 -0.68086 -0.00038918 571.594501730269 580.274624038823 15.175 0.40359 15.175 14.998 15.401 0 20 10 5 0 0 0 0.00015633 1 2810 77.324 77.324 1 0.7978 1.0289 0 20745000 9800200 10944000 29683 1471 11237 11542 46352 46352 RLAALEAR 8 0 2 Unmodified _RLAALEAR_ 0 0 1 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.2828 2 450.274701 898.534849 90433.27 0.059547 2.6813E-05 0.25017 0.00011265 0.30972 0.00013946 450.275569509803 460.282237232812 25.234 0.26903 25.234 25.084 25.353 0 31 9 6 0 0 0 0.029232 1 10857 60.436 16.667 1 0.85271 0.9648 0 30933000 15696000 15237000 29684 104 11238 11543 46353 46353 RLASSVLR 8 0 2 Unmodified _RLASSVLR_ 0 0 1 J3QR09;J3KTE4;Q53G49;P84098;J3QL15 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.2831 2 451.282526 900.550499 88239.75 0.47539 0.00021453 0.14565 6.5728E-05 0.62103 0.00028026 451.282496020856 461.290808094077 27.271 0.4194 27.271 27.119 27.538 -1.9073E-06 91 21 8 0 0 0 0.0056811 1 12514 96.936 32.699 1 0.75002 0.818 0 133460000 75705000 57754000 29685 1331 11239 11544 46354 46354 RLASSVLR 8 0 2 Unmodified _RLASSVLR_ 0 0 1 J3QR09;J3KTE4;Q53G49;P84098;J3QL15 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.2832 2 451.282526 900.550499 89112.89 0.43837 0.00019783 -0.23392 -0.00010556 0.20445 9.2266E-05 451.282375669245 461.290576155582 25.98 0.61905 25.98 25.849 26.468 0 102 34 7 0 0 0 0.014918 1 11470 76.605 15.709 1 0.80031 0.95489 0 241880000 132630000 109250000 29686 1331 11239 11544 46355 46355 RLASTSDIEEK 11 1 1 Unmodified _RLASTSDIEEK_ 0 0 1 F8VZN8;A0A024RBF1;B2RAH5;O14974;H0YIS4;H0YHI8 F8VZN8 F8VZN8 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8371 2 624.825149 1247.63574 76782.48 0.70172 0.00043845 -0.62518 -0.00039063 0.076541 4.7825E-05 624.824784892991 633.836314108345 22.7 0.18348 22.7 22.603 22.786 0 43 11 7 0 0 0 0.0026425 2 8711 66.435 27.286 1 1.1598 1.3172 0 4836000 2564800 2271200 29687 336 11240 11545 46356;46357 46357 RLASTSDIEEK 11 1 1 Unmodified _RLASTSDIEEK_ 0 0 1 F8VZN8;A0A024RBF1;B2RAH5;O14974;H0YIS4;H0YHI8 F8VZN8 F8VZN8 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.8259 2 624.825149 1247.63574 78132.8 0.70519 0.00044062 -0.087311 -5.4554E-05 0.61788 0.00038607 624.824780150613 633.836743306046 22.17 0.18023 22.17 22.061 22.241 0 27 8 5 0 0 0 0.010598 1 8233 54.608 26.209 1 1.3894 1.5311 0 6249800 2451500 3798300 29688 336 11240 11545 46358 46358 RLDADLAR 8 0 2 Unmodified _RLDADLAR_ 0 0 1 E9PEN0;B7Z6R2;A0A1B0GW41;Q8WYH8 E9PEN0 E9PEN0 ING5 Inhibitor of growth protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.2625 2 465.261791 928.509028 NaN NaN NaN 0.30487 0.00014184 NaN NaN NaN NaN 27.289 0.35278 27.289 27.065 27.418 0 0 0 0 0.00017419 1 12548 117.89 42.677 1 NaN NaN 0 13263000 13263000 0 29689 633 11241 11546 46359 46359 RLDELEEATK 10 1 1 Unmodified _RLDELEEATK_ 0 0 1 A0A024RAC0;Q86V48;E5RFK8;Q05DE3;E5RHU7 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3152 2 602.314417 1202.61428 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.647 1 34.647 34.147 35.147 0 0 0 0 0.029904 1 17371 58.592 13.431 1 29690 300 11242 11547 46360 46360 RLDELEEATK 10 1 1 Unmodified _RLDELEEATK_ 0 0 1 A0A024RAC0;Q86V48;E5RFK8;Q05DE3;E5RHU7 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3267 2 602.314417 1202.61428 NaN NaN NaN 0.096377 5.8049E-05 NaN NaN NaN NaN 33.17 0.37543 33.17 33.021 33.396 0 0 0 0 0.0012152 1 16557 87.298 30.735 1 NaN NaN 0 9560800 0 9560800 29691 300 11242 11547 46361 46361 RLDIQEALK 9 1 1 Unmodified _RLDIQEALK_ 0 0 1 A0A024R137;A0A024R102;Q96GM5;B4DF50;F8VUB0;F8VZ70;F8VW95 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.3309 2 543.319306 1084.62406 83547.8 0.48915 0.00026577 -0.14567 -7.9147E-05 0.34348 0.00018662 543.319125792376 552.330401448615 55.052 0.46138 55.052 54.777 55.239 0 104 37 4 0 0 0 0.025314 2 31484 55.064 28.462 1 0.54778 0.61672 0 13709000 8479600 5229600 29692 65 11243 11548 46362;46363 46362 RLDQCPESPLQR 12 0 2 Unmodified _RLDQCPESPLQR_ 0 0 1 Q5T749 Q5T749 Q5T749 KPRP Keratinocyte proline-rich protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.8749 2 749.875182 1497.73581 NaN NaN NaN -0.28554 -0.00021412 NaN NaN NaN NaN 36.343 0.067009 36.343 36.285 36.352 0 0 0 0 0.04573 1 18361 42.395 26.823 1 NaN NaN 0 2427900 2427900 0 29693 1824 11244 11549 46364 46364 RLDQELDFILSQQK 14 1 1 Unmodified _RLDQELDFILSQQK_ 0 0 1 M0QXN5;A0A024QZF1;P37198 M0QXN5 M0QXN5 NUP62;hCG_19665 Nuclear pore glycoprotein p62 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.6548 3 578.312459 1731.91555 NaN NaN NaN -0.24954 -0.00014431 NaN NaN NaN NaN 107.15 0.37301 107.15 106.97 107.34 0 0 0 0 0.039713 1 66701 27.643 21.739 1 NaN NaN 0 3034700 0 3034700 29694 19 11245 11550 46365 46365 RLDQELDFILSQQK 14 1 1 Unmodified _RLDQELDFILSQQK_ 0 0 1 M0QXN5;A0A024QZF1;P37198 M0QXN5 M0QXN5 NUP62;hCG_19665 Nuclear pore glycoprotein p62 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3201 3 578.312459 1731.91555 NaN NaN NaN -0.81217 -0.00046969 NaN NaN NaN NaN 106.11 0.15562 106.11 106.08 106.24 -7.6294E-06 0 0 0 0.02858 1 67524 30.072 18.552 1 NaN NaN 0 3922200 0 3922200 29695 19 11245 11550 46366 46366 RLEAEAGPAGELAGAR 16 0 2 Unmodified _RLEAEAGPAGELAGAR_ 0 0 1 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.9501 3 523.277749 1566.81142 NaN NaN NaN -0.40071 -0.00020968 NaN NaN NaN NaN 49.387 0.25682 49.387 49.257 49.513 0 0 0 0 0.0076943 1 27130 39.348 29.599 1 NaN NaN 0 6553100 0 6553100 29696 1327 11246 11551 46367 46367 RLEAEAGPAGELAGAR 16 0 2 Unmodified _RLEAEAGPAGELAGAR_ 0 0 1 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2803 3 523.277749 1566.81142 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.295 1 47.295 46.795 47.795 0 0 0 0 0.0019374 1 26247 52.862 35.793 1 29697 1327 11246 11551 46368 46368 RLEAVLASR 9 0 2 Unmodified _RLEAVLASR_ 0 0 1 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.8067 2 507.806365 1013.59818 84415.3 0.41695 0.00021173 -0.19025 -9.6613E-05 0.22669 0.00011512 507.806276560477 517.814439365537 36.667 0.38835 36.667 36.429 36.817 0 136 35 6 0 0 0 0.0051988 2 18529 72.643 29.397 1 0.86705 0.94215 0 39171000 19520000 19651000 29698 2007 11247 11552 46369;46370 46369 RLEFENQK 8 1 1 Unmodified _RLEFENQK_ 0 0 1 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.2801 2 532.28018 1062.54581 83115.84 0.11116 5.9171E-05 0.22141 0.00011785 0.33258 0.00017702 532.280350173291 541.291278485969 23.323 0.37186 23.323 23.184 23.556 -1.9073E-06 74 17 7 0 0 0 0.0083729 1 9223 91.853 35.843 1 0.81729 0.92069 0 22378000 12267000 10110000 29699 1739 11248 11553 46371 46371 RLEQLGAQR 9 0 2 Unmodified _RLEQLGAQR_ 0 0 1 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.807 2 535.806897 1069.59924 82181.18 0.40658 0.00021785 0.093509 5.0103E-05 0.50009 0.00026795 535.80686271219 545.815165129159 20.816 0.37483 20.816 20.697 21.071 0 68 15 6 0 0 0 0.031097 1 7109 51.949 15.189 1 0.80435 0.89346 0 24032000 11856000 12176000 29700 719 11249 11554 46372 46372 RLFMSR 6 0 2 Oxidation (M) _RLFM(ox)SR_ RLFM(1)SR RLFM(41.89)SR 0 1 1 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.2318 2 413.223623 824.432692 96385.01 -0.15931 -6.5831E-05 0.35465 0.00014655 0.19534 8.072E-05 413.223770421495 423.231968136874 20.331 0.83162 20.331 19.997 20.829 0 139 27 8 0 0 0 0.028598 1 6465 41.892 6.643 1 1.3668 1.6408 0 307250000 138620000 168630000 29701 16 11250 11555 46373 46373 7 RLGASLAFNNIYR 13 0 2 Unmodified _RLGASLAFNNIYR_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.9439 3 498.944042 1493.8103 89476.39 0.30328 0.00015132 0.4077 0.00020342 0.71098 0.00035474 498.94416817286 505.616561061252 92.587 0.40869 92.587 92.389 92.797 0 68 19 5 0 0 0 0.014593 1 51554 27.467 25.944 1 0.33761 0.30712 0 2551100 1710100 840990 29702 1665 11251 11556 46374 46374 RLGASLAFNNIYR 13 0 2 Unmodified _RLGASLAFNNIYR_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.9444 3 498.944042 1493.8103 88013.66 -0.013516 -6.7439E-06 0.2766 0.00013801 0.26309 0.00013127 499.278530853611 505.616289498075 92.19 0.41733 92.19 91.985 92.403 0 65 21 4 0 0 0 0.048937 1 50413 16.675 16.675 1 0.34683 0.30887 0 1699900 1112400 587580 29703 1665 11251 11556 46375 46375 RLGSLVDEFK 10 1 1 Unmodified _RLGSLVDEFK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.3248 2 582.324588 1162.63462 80302.67 0.39129 0.00022786 0.41892 0.00024395 0.8102 0.0004718 582.324730908766 591.335925291411 72.191 1.1261 72.191 71.766 72.892 0 363 85 6 0 0 0 0.0050082 1 42601 66.568 40.463 1 0.36944 0.43361 0 33038000 24741000 8296400 29704 82 11252 11557 46376 46376 RLGSLVDEFK 10 1 1 Unmodified _RLGSLVDEFK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.8147 2 582.324588 1162.63462 78849.27 0.38242 0.0002227 0.22032 0.0001283 0.60275 0.000351 582.324706597198 591.335894923665 80.2 0.61102 80.2 79.883 80.494 0 200 34 8 0 0 0 0.035383 1 42535 46.819 31.668 1 0.27739 0.23578 0 29435000 22770000 6664500 29705 82 11252 11557 46377 46377 RLGTVLPVIEK 11 1 1 Unmodified _RLGTVLPVIEK_ 0 0 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8975 2 612.887355 1223.76016 78019.59 0.57426 0.00035195 -0.82804 -0.00050749 -0.25378 -0.00015554 613.387974957967 621.898057277284 76.575 0.97128 76.575 76.189 77.161 0 268 82 4 0 0 0 0.0161 1 45009 49.3 31.436 1 1.4786 1.7235 0 30951000 11258000 19694000 29706 1412 11253 11558 46378 46378 RLGTVLPVIEK 11 1 1 Unmodified _RLGTVLPVIEK_ 0 0 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.888 2 612.887355 1223.76016 76727.94 0.5718 0.00035045 0.44331 0.0002717 1.0151 0.00062215 612.887888203497 621.898450317121 74.377 0.65254 74.377 74.079 74.732 0 283 57 7 0 0 0 0.0023601 1 44674 67.726 40.611 1 1.2737 1.4817 0 40811000 18162000 22649000 29707 1412 11253 11558 46379 46379 RLGTVLPVIEK 11 1 1 Unmodified _RLGTVLPVIEK_ 0 0 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.8879 2 612.887355 1223.76016 75921.98 0.51761 0.00031724 0.17712 0.00010855 0.69473 0.00042579 612.887772335639 621.898416071076 85.719 0.68317 85.719 85.498 86.181 0 165 38 6 0 0 0 0.0027253 1 46124 66.056 45.185 1 1.6055 1.346 0 6210300 2242000 3968300 29708 1412 11253 11558 46380 46380 RLIAEAK 7 1 1 Unmodified _RLIAEAK_ 0 0 1 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;Q86X79;Q05BL3;Q6PKI5;Q6PIN4 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.7532 2 400.75307 799.491587 94109.97 -0.2427 -9.7262E-05 0.51413 0.00020604 0.27144 0.00010878 400.753088927474 409.764569609708 19.149 0.38568 19.149 18.95 19.336 0 45 18 6 0 0 0 0.035076 1 5649 93.561 18.317 1 0.94102 1.0999 0 49834000 25012000 24822000 29709 339 11254 11559 46381 46381 RLIDLHSPSEIVK 13 1 1 Unmodified _RLIDLHSPSEIVK_ 0 0 1 P60866;G3XAN0 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.9672 3 502.959469 1505.85658 86342.88 0.45747 0.00023009 -0.2096 -0.00010542 0.24787 0.00012467 502.959349917875 508.966857684509 68.377 0.7975 68.377 68 68.797 0 185 65 6 0 0 0 0.0032097 1 40618 39.005 32.729 1 1.1542 1.2987 0 13460000 6950000 6509500 29710 1625 11255 11560 46382 46382 RLIDLHSPSEIVK 13 1 1 Unmodified _RLIDLHSPSEIVK_ 0 0 1 P60866;G3XAN0 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.9596 3 502.959469 1505.85658 83713.24 0.24137 0.0001214 0.025401 1.2776E-05 0.26677 0.00013417 502.959493750119 508.967002263212 77.868 0.88223 77.868 77.596 78.478 0 290 57 8 0 0 0 3.7205E-05 2 41720 88.552 79.732 1 1.2672 1.1068 0 23841000 11635000 12205000 29711 1625 11255 11560 46383;46384 46384 RLIDLHSPSEIVK 13 1 1 Unmodified _RLIDLHSPSEIVK_ 0 0 1 P60866;G3XAN0 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.6351 3 502.959469 1505.85658 83870.91 0.33513 0.00016856 -0.12363 -6.218E-05 0.21151 0.00010638 502.959471796966 508.966857597207 77.632 0.90135 77.632 77.343 78.244 0 324 59 8 0 0 0 0.012411 1 40664 29.355 26.275 1 1.2945 1.0979 0 18760000 7862700 10898000 29712 1625 11255 11560 46385 46385 RLIPDGCGVK 10 1 1 Unmodified _RLIPDGCGVK_ 0 0 1 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.8059 2 557.805508 1113.59646 76826.48 0.41326 0.00023052 0.046081 2.5704E-05 0.45934 0.00025622 557.805549769873 566.816780096069 34.524 0.50776 34.524 34.304 34.812 0 173 40 8 0 0 0 1.587E-11 2 17253 160.75 108.35 1 0.93936 1.1408 0 382050000 186620000 195430000 29713 1524;1266 11256 11561 46386;46387 46386 RLIPDGCGVK 10 1 1 Unmodified _RLIPDGCGVK_ 0 0 1 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.806 2 557.805508 1113.59646 77813.96 0.48607 0.00027113 -0.076601 -4.2729E-05 0.40947 0.0002284 557.805514570118 566.816719490124 33.077 0.62937 33.077 32.854 33.484 0 281 58 8 0 0 0 0.00057387 3 16432 100.48 75.554 1 0.85855 1.0168 0 218060000 118040000 100020000 29714 1524;1266 11256 11561 46388;46389;46390 46389 RLIPDGCGVK 10 1 1 Unmodified _RLIPDGCGVK_ 0 0 1 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.8176 2 557.805508 1113.59646 76626.27 0.42966 0.00023967 -0.059596 -3.3243E-05 0.37007 0.00020643 557.805680627263 566.816732130657 38.585 0.91861 38.585 38.338 39.257 0 342 71 9 0 0 0 0.020052 1 17436 51.268 28.527 1 1.1064 0.99508 0 104230000 48436000 55797000 29715 1524;1266 11256 11561 46391 46391 RLIPDGCGVK 10 1 1 Unmodified _RLIPDGCGVK_ 0 0 1 F8W7C6;A0A087WV22;X5D7P1;X1WI28;X5D2T3;P27635 F8W7C6;X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.8048 2 557.805508 1113.59646 74469.7 0.32187 0.00017954 -0.16968 -9.4648E-05 0.15219 8.4894E-05 557.805539912384 566.816733742286 38.429 0.93313 38.429 38.119 39.052 0 395 72 10 0 0 0 0.0027754 2 16846 82.749 40.64 1 1.0483 0.89565 0 84743000 42730000 42013000 29716 1524;1266 11256 11561 46392;46393 46393 RLITGASDSELR 12 0 2 Unmodified _RLITGASDSELR_ 0 0 1 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.3596 2 659.35969 1316.70483 75042.88 0.83307 0.00054929 0.13276 8.7538E-05 0.96583 0.00063683 659.3596735044 669.367969224701 37.097 0.36608 37.097 36.993 37.359 0 143 31 7 0 0 0 0.00040681 2 18870 90.913 90.913 1 1.0084 1.0962 0 45636000 21880000 23756000 29717 1827 11257 11562 46394;46395 46395 RLITGASDSELR 12 0 2 Unmodified _RLITGASDSELR_ 0 0 1 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.581 3 439.908886 1316.70483 90840.07 0.20383 8.9668E-05 -0.12095 -5.3208E-05 0.08288 3.646E-05 439.908753153852 446.581051611679 37.116 0.38541 37.116 36.984 37.37 0 123 33 5 0 0 0 4.2445E-06 2 18879 95.183 95.183 1 0.93848 1.0193 0 33802000 15264000 18538000 29718 1827 11257 11562 46396;46397 46397 RLITGASDSELR 12 0 2 Unmodified _RLITGASDSELR_ 0 0 1 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 446.5812 3 439.908886 1316.70483 NaN NaN NaN 0.073534 3.2348E-05 NaN NaN NaN NaN 42.065 0.47239 42.065 41.84 42.312 0 0 0 0 0.024312 1 19633 36.938 28.841 1 NaN NaN 0 2854100 0 2854100 29719 1827 11257 11562 46398 46398 RLITGASDSELR 12 0 2 Unmodified _RLITGASDSELR_ 0 0 1 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 439.909 3 439.908886 1316.70483 90915.13 -0.23372 -0.00010282 0.033 1.4517E-05 -0.20072 -8.8299E-05 439.908901127535 446.581069619677 41.855 0.57169 41.855 41.607 42.178 0 182 44 6 0 0 0 0.042868 1 18908 19.754 19.754 1 1.1553 1.0458 0 4535700 2033800 2502000 29720 1827 11257 11562 46399 46399 RLITGASDSELR 12 0 2 Unmodified _RLITGASDSELR_ 0 0 1 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.3683 2 659.35969 1316.70483 75732.89 0.27792 0.00018325 0.22097 0.0001457 0.49889 0.00032895 659.359877540235 669.368205305861 41.862 0.51422 41.862 41.617 42.131 0 218 39 8 0 0 0 0.0014739 1 18919 64.439 32.504 1 1.1863 1.0788 0 6623800 3001200 3622600 29721 1827 11257 11562 46400 46400 RLIVVLEGASLETVK 15 1 1 Unmodified _RLIVVLEGASLETVK_ 0 0 1 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.3404 3 542.997812 1625.97161 82281.68 0.79158 0.00042983 -0.17238 -9.3603E-05 0.6192 0.00033622 543.331905723758 549.005127002567 111.07 0.23274 111.07 110.93 111.16 0 24 9 5 0 0 0 0.04045 1 64302 16.529 16.529 1 1.1642 1.0448 0 2019500 838170 1181400 29722 759 11258 11563 46401 46401 RLLINLYK 8 1 1 Unmodified _RLLINLYK_ 0 0 1 Q9H8H0;J3QKV1 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.8318 2 516.831852 1031.64915 84557.73 0.34977 0.00018077 0.061018 3.1536E-05 0.41079 0.00021231 516.83173944408 525.843055820322 69.678 1.0518 69.678 69.125 70.177 0 349 87 6 0 0 0 0.013943 1 41523 79.116 0 1 0.91884 1.0605 0 30093000 16590000 13503000 29723 2042 11259 11564 46402 46402 RLLPSLIGR 9 0 2 Unmodified _RLLPSLIGR_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.8351 2 512.834926 1023.6553 84033.69 0.43333 0.00022223 0.015524 7.9615E-06 0.44886 0.00023019 512.83484436327 522.843174350866 76.571 1.6684 76.571 75.791 77.46 0 702 141 7 0 0 0 0.025467 1 45268 54.982 33.454 1 0.63657 0.69412 0 124850000 74897000 49956000 29724 1415 11260 11565 46403 46403 RLLPSLIGR 9 0 2 Unmodified _RLLPSLIGR_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.8344 2 512.834926 1023.6553 83148.98 0.47729 0.00024477 -0.36321 -0.00018627 0.11408 5.8506E-05 512.8345808693 522.843085649092 84.735 1.3531 84.735 84.32 85.673 -7.6294E-06 453 90 9 0 0 0 0.033838 1 45330 50.473 30.476 1 0.6983 0.65936 0 76342000 48394000 27948000 29725 1415 11260 11565 46404 46404 RLMDGEEPLPMLPSYK 16 1 1 2 Oxidation (M) _RLM(ox)DGEEPLPM(ox)LPSYK_ RLM(1)DGEEPLPM(1)LPSYK RLM(46.87)DGEEPLPM(46.87)LPSYK 0 2 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.6465 3 636.646233 1906.91687 75827.8 0.45871 0.00029204 0.46477 0.00029589 0.92348 0.00058793 636.980639025822 642.654361110664 81.314 1.1723 81.314 80.651 81.824 0 331 100 5 0 0 0 0.00019441 1 48191 46.873 46.873 1 1.3149 1.4886 0 23485000 10514000 12970000 29726 1471 11261 11566 46405 46405 1202;1203 RLNQEVALNLK 11 1 1 Unmodified _RLNQEVALNLK_ 0 0 1 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.395 2 649.382968 1296.75138 74489.48 0.42148 0.00027371 0.27805 0.00018056 0.69954 0.00045427 649.382948319301 658.394483674525 63.485 1.0472 63.485 63.07 64.118 0 342 91 6 0 0 0 0.0003231 1 32577 93.111 64.384 1 2.7918 2.378 0 9401700 3024500 6377200 29727 1945 11262 11567 46406 46406 RLNVWDLSK 9 1 1 Unmodified _RLNVWDLSK_ 0 0 1 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.8206 2 565.819473 1129.62439 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.972 1 69.972 69.472 70.472 0 0 0 0 0.041866 1 40695 60.91 9.0559 1 29728 1771;1695 11263 11568 46407 46407 RLNVWDLSK 9 1 1 Unmodified _RLNVWDLSK_ 0 0 1 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8196 2 565.819473 1129.62439 80301.85 0.60809 0.00034407 -0.19293 -0.00010916 0.41516 0.00023491 565.819296068957 574.830489781481 67.476 1.1515 67.476 66.795 67.946 0 286 97 5 0 0 0 0.00028445 2 39778 107.57 107.57 1 0.74218 0.86887 0 53245000 32488000 20757000 29729 1771;1695 11263 11568 46408;46409 46409 RLNVWDLSK 9 1 1 Unmodified _RLNVWDLSK_ 0 0 1 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.8307 2 565.819473 1129.62439 79841.59 0.43416 0.00024566 0.12988 7.3491E-05 0.56405 0.00031915 565.819457443621 574.830717476483 78.092 1.1713 78.092 77.691 78.862 0 337 75 7 0 0 0 0.0091302 3 41786 66.692 66.692 1 1.6133 1.4009 0 17821000 6447100 11374000 29730 1771;1695 11263 11568 46410;46411;46412 46412 RLNVWDLSK 9 1 1 Unmodified _RLNVWDLSK_ 0 0 1 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.8311 2 565.819473 1129.62439 80181.69 0.54751 0.00030979 0.014654 8.2915E-06 0.56216 0.00031808 565.819439738188 574.830642660721 78.088 1.2453 78.088 77.607 78.852 0 368 81 8 0 0 0 0.0011998 2 40919 95.358 95.358 1 1.627 1.3811 0 22298000 8916200 13382000 29731 1771;1695 11263 11568 46413;46414 46413 RLPILVQLVDTLGAEK 16 1 1 Unmodified _RLPILVQLVDTLGAEK_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.3593 3 589.02425 1764.05092 78270.73 0.94173 0.0005547 -0.084117 -4.9547E-05 0.85761 0.00050515 589.024221556485 595.031622746117 133.09 0.25357 133.09 132.97 133.22 0 48 8 10 0 0 0 2.0061E-09 1 87052 108.14 95.582 1 0.87845 1.0544 0 62738000 33196000 29542000 29732 897 11264 11569 46415 46415 RLPILVQLVDTLGAEK 16 1 1 Unmodified _RLPILVQLVDTLGAEK_ 0 0 1 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.0328 3 589.02425 1764.05092 77893.98 0.85497 0.0005036 -0.33703 -0.00019852 0.51794 0.00030508 589.358293260281 595.031494927184 133.04 0.22639 133.04 132.93 133.16 0 65 9 11 0 0 0 1.8236E-25 2 89193 145.55 132.99 1 0.90655 1.0678 0 91722000 48808000 42914000 29733 897 11264 11569 46416;46417 46416 RLPPFETFSQGPTLQFTLR 19 0 2 Unmodified _RLPPFETFSQGPTLQFTLR_ 0 0 1 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.0712 3 745.735539 2234.18479 71817.92 0.76861 0.00057318 0.24976 0.00018626 1.0184 0.00075944 746.404972244229 752.741964780331 117.47 0.75839 117.47 117.17 117.93 7.6294E-06 213 51 6 0 0 0 3.6077E-06 1 75177 68.168 68.168 1 0.63744 0.70581 0 10888000 6073600 4814600 29734 1336 11265 11570 46418 46418 RLPPFETFSQGPTLQFTLR 19 0 2 Unmodified _RLPPFETFSQGPTLQFTLR_ 0 0 1 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.7427 3 745.735539 2234.18479 71099.55 0.62552 0.00046647 -0.082809 -6.1754E-05 0.54271 0.00040472 746.07013466706 752.406756659495 116.54 0.70715 116.54 116.29 117 -7.6294E-06 237 44 7 0 0 0 1.5156E-08 1 76283 88.176 88.176 1 1.0201 1.1141 0 19084000 11764000 7319500 29735 1336 11265 11570 46419 46419 RLPPFETFSQGPTLQFTLR 19 0 2 Unmodified _RLPPFETFSQGPTLQFTLR_ 0 0 1 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.4084 3 745.735539 2234.18479 70668.94 1.1933 0.00088986 -0.35029 -0.00026122 0.84298 0.00062864 746.069628877284 752.741944667669 128.12 0.76704 128.12 127.78 128.55 0 208 31 9 0 0 0 6.125E-06 2 77161 59.339 59.339 1 1.945 1.6333 0 12522000 3759400 8763000 29736 1336 11265 11570 46420;46421 46420 RLPPFETFSQGPTLQFTLR 19 0 2 Unmodified _RLPPFETFSQGPTLQFTLR_ 0 0 1 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 746.0706 3 745.735539 2234.18479 70618.36 0.72133 0.00053792 0.33296 0.0002483 1.0543 0.00078622 746.070129703899 752.407671539632 127.88 0.76294 127.88 127.54 128.3 -7.6294E-06 182 31 9 0 0 0 7.9298E-06 3 76222 55.337 55.337 1 1.7473 1.6037 0 12046000 4153300 7892600 29737 1336 11265 11570 46422;46423;46424 46424 RLPPQQIEK 9 1 1 Unmodified _RLPPQQIEK_ 0 0 1 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.8384 2 554.827298 1107.64004 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.648 1 23.648 23.148 24.148 0 0 0 0 0.042945 1 9506 60.59 34.696 1 29738 814 11266 11571 46425 46425 RLPVATIFTTHATLLGR 17 0 2 Unmodified _RLPVATIFTTHATLLGR_ 0 0 1 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z8P0 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.0361 3 623.03526 1866.08395 NaN NaN NaN 0.050211 3.1283E-05 NaN NaN NaN NaN 109.33 1.3114 109.33 108.58 109.89 0 0 0 0 4.99E-05 1 68312 69.935 66.772 1 NaN NaN 0 9030300 9030300 0 29739 1479 11267 11572 46426 46426 RLPVATIFTTHATLLGR 17 0 2 Unmodified _RLPVATIFTTHATLLGR_ 0 0 1 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z8P0 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.707 3 623.03526 1866.08395 76335.7 0.95396 0.00059435 -0.0096905 -6.0375E-06 0.94427 0.00058831 623.03523955317 629.70738261864 113.35 1.0498 113.35 113.13 114.18 7.6294E-06 285 50 9 0 0 0 0.0026456 1 65923 31.41 20.942 1 0.45634 0.37211 0 38673000 26881000 11792000 29740 1479 11267 11572 46427 46427 RLPVATIFTTHATLLGR 17 0 2 Unmodified _RLPVATIFTTHATLLGR_ 0 0 1 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z8P0 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.3702 3 623.03526 1866.08395 77028.12 0.62932 0.00039209 0.069509 4.3307E-05 0.69883 0.00043539 623.035372524885 629.707434833238 112.93 0.85852 112.93 112.66 113.52 0 257 40 11 0 0 0 0.00036042 2 64725 40.844 36.81 1 0.47518 0.44323 0 34425000 22471000 11954000 29741 1479 11267 11572 46428;46429 46428 RLQDVSGQLNSTK 13 1 1 Unmodified _RLQDVSGQLNSTK_ 0 0 1 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.3999 2 723.388979 1444.76341 NaN NaN NaN 0.31392 0.00022709 NaN NaN NaN NaN 28.945 0.11685 28.945 28.866 28.983 1.9073E-06 0 0 0 0.012736 1 13870 51.841 31.537 1 NaN NaN 0 1776200 0 1776200 29742 367 11268 11573 46430 46430 RLQDVSGQLNSTK 13 1 1 Unmodified _RLQDVSGQLNSTK_ 0 0 1 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.4001 2 723.388979 1444.76341 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.084 1 28.084 27.584 28.584 0 0 0 0 0.0045412 1 13293 73.848 48.411 1 29743 367 11268 11573 46431 46431 RLQDVSGQLNSTK 13 1 1 Unmodified _RLQDVSGQLNSTK_ 0 0 1 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.3994 2 723.388979 1444.76341 72095.22 0.56736 0.00041042 -0.23366 -0.00016903 0.3337 0.00024139 723.388956899172 732.400053860255 32.833 0.20681 32.833 32.715 32.921 0 24 7 5 0 0 0 0.011804 1 13782 45.507 45.507 1 1.1654 0.98486 0 3691200 1646500 2044600 29744 367 11268 11573 46432 46432 RLQDVSGQLSSSK 13 1 1 Unmodified _RLQDVSGQLSSSK_ 0 0 1 A0A024R8H6;Q15059;B4DS09 A0A024R8H6 A0A024R8H6 BRD3 Bromodomain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.8763 2 702.875704 1403.73686 75811.22 0.86206 0.00060592 -0.23844 -0.00016759 0.62362 0.00043833 702.875827615849 711.886685938532 28.521 0.17683 28.521 28.454 28.631 -1.9073E-06 26 10 4 0 0 0 0.013596 1 13489 44.299 44.299 1 0.69696 0.77469 0 7697500 4714700 2982800 29745 249 11269 11574 46433 46433 RLQEIAQK 8 1 1 Unmodified _RLQEIAQK_ 0 0 1 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.2929 2 493.293091 984.571629 NaN NaN NaN 0.14014 6.913E-05 NaN NaN NaN NaN 18.523 0.38782 18.523 18.372 18.76 0 0 0 0 0.0051917 1 5494 89.046 23.37 1 NaN NaN 0 32792000 32792000 0 29746 1965 11270 11575 46434 46434 RLQEIAQK 8 1 1 Unmodified _RLQEIAQK_ 0 0 1 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.2932 2 493.293091 984.571629 85358.97 0.11546 5.6955E-05 0.45502 0.00022446 0.57048 0.00028142 493.293240240186 502.304412926235 18.412 0.3117 18.412 18.285 18.597 0 24 9 5 0 0 0 0.0045895 1 5159 98.997 21.322 1 0.25126 0.29189 0 38547000 29994000 8553300 29747 1965 11270 11575 46435 46435 RLQELEGQIADLK 13 1 1 Unmodified _RLQELEGQIADLK_ 0 0 1 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.9233 2 756.922655 1511.83076 NaN NaN NaN 0.78148 0.00059152 NaN NaN NaN NaN 74.055 0.47993 74.055 73.789 74.269 0 0 0 0 0.0034982 1 44445 65.179 38.393 1 NaN NaN 0 8517000 8517000 0 29748 1803 11271 11576 46436 46436 RLQELEGQIADLK 13 1 1 Unmodified _RLQELEGQIADLK_ 0 0 1 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.9232 2 756.922655 1511.83076 69244.73 0.65313 0.00049437 -0.39629 -0.00029996 0.25684 0.00019441 756.922882595791 765.932959971904 86.167 0.8121 86.167 85.868 86.68 -7.6294E-06 170 46 6 0 0 0 0.0059083 1 46441 60.49 23.965 1 1.4413 1.214 0 8049800 3476700 4573100 29749 1803 11271 11576 46437 46437 RLQGLSASDVTEQIIK 16 1 1 Unmodified _RLQGLSASDVTEQIIK_ 0 0 1 Q9UBB5;O60535 Q9UBB5 Q9UBB5 MBD2;NY-CO-41 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.005 3 586.663381 1756.96831 81192.73 0.52796 0.00030974 -0.298 -0.00017483 0.22996 0.00013491 586.662947052233 592.670606151316 99.655 0.40406 99.655 99.396 99.8 0 109 23 7 0 0 0 3.8169E-05 2 56371 75.143 58.65 1 1.5549 1.3308 0 10401000 4123900 6277400 29750 2096 11272 11577 46438;46439 46438 RLQGLSASDVTEQIIK 16 1 1 Unmodified _RLQGLSASDVTEQIIK_ 0 0 1 Q9UBB5;O60535 Q9UBB5 Q9UBB5 MBD2;NY-CO-41 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.6709 3 586.663381 1756.96831 79705.01 0.50022 0.00029346 0.0039282 2.3045E-06 0.50414 0.00029576 586.663068402129 592.670861765469 99.344 0.42451 99.344 99.127 99.551 0 128 27 7 0 0 0 0.0012526 1 55245 36.112 21.153 1 1.7731 1.4896 0 6975700 2294700 4681000 29751 2096 11272 11577 46440 46440 RLQLPVWEYK 10 1 1 Unmodified _RLQLPVWEYK_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3785 2 666.377155 1330.73976 NaN NaN NaN 0.2772 0.00018472 NaN NaN NaN NaN 87.158 0.27603 87.158 86.98 87.256 0 0 0 0 0.01651 1 53660 56.916 10.758 1 NaN NaN 0 7494200 7494200 0 29752 1379 11273 11578 46441 46441 RLQLPVWEYK 10 1 1 Unmodified _RLQLPVWEYK_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3889 2 666.377155 1330.73976 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.417 1 87.417 86.917 87.917 0 0 0 0 0.0011509 1 53865 75.378 48.049 1 29753 1379 11273 11578 46442 46442 RLQTQVFK 8 1 1 Unmodified _RLQTQVFK_ 0 0 1 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.3037 2 510.303458 1018.59236 82825.12 0.44966 0.00022947 0.90428 0.00046146 1.3539 0.00069092 510.30430362699 519.314470648167 29.117 0.61083 29.117 29.003 29.614 -1.9073E-06 161 43 9 0 0 0 4.5201E-05 2 13979 138.78 79.804 1 0.91346 1.1072 0 282530000 148810000 133710000 29754 157 11274 11579 46443;46444 46443 RLQTQVFK 8 1 1 Unmodified _RLQTQVFK_ 0 0 1 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.3049 2 510.303458 1018.59236 NaN NaN NaN 1.8753 0.000957 NaN NaN NaN NaN 30.289 0.27685 30.289 30.079 30.355 0 0 0 0 0.025821 1 14765 62.107 30.804 1 NaN NaN 0 5738400 5738400 0 29755 157 11274 11579 46445 46445 RLQTQVFK 8 1 1 Unmodified _RLQTQVFK_ 0 0 1 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.3039 2 510.303458 1018.59236 82909.38 0.40342 0.00020587 0.80689 0.00041176 1.2103 0.00061763 510.304017731996 519.314766562674 28.216 0.31204 28.216 28.095 28.407 0 61 15 10 0 0 0 0.0016402 2 13375 120.87 65.192 1 0.93044 1.1068 0 440750000 234920000 205830000 29756 157 11274 11579 46446;46447 46446 RLQTQVFK 8 1 1 Unmodified _RLQTQVFK_ 0 0 1 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.3037 2 510.303458 1018.59236 84036.55 0.13274 6.7739E-05 0.76037 0.00038802 0.89311 0.00045576 510.303891599307 519.314889269895 32.884 0.3604 32.884 32.779 33.139 0 80 21 8 0 0 0 0.0017929 2 14298 112.41 67.076 1 0.77635 0.70207 0 137110000 76804000 60310000 29757 157 11274 11579 46448;46449 46448 RLQTQVFK 8 1 1 Unmodified _RLQTQVFK_ 0 0 1 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.3036 2 510.303458 1018.59236 84341.35 0.28526 0.00014557 0.5319 0.00027143 0.81717 0.000417 510.303665873614 519.314892620961 32.863 0.35984 32.863 32.694 33.054 0 71 15 9 0 0 0 0.0016402 1 13793 120.87 66.711 1 0.7852 0.67142 0 100570000 56034000 44531000 29758 157 11274 11579 46450 46450 RLSFAVPFR 9 0 2 Unmodified _RLSFAVPFR_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 364.8816 3 364.881943 1091.624 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.756 1 86.756 86.256 87.256 0 0 0 0 0.045103 1 52297 39.622 22.846 1 29759 1665 11275 11580 46451 46451 RLSFAVPFR 9 0 2 Unmodified _RLSFAVPFR_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 364.8816 3 364.881943 1091.624 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.249 1 84.249 83.749 84.749 0 0 0 0 0.011513 1 51716 54.416 37.64 1 29760 1665 11275 11580 46452 46452 RLSFAVPFR 9 0 2 Unmodified _RLSFAVPFR_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.8202 2 546.819276 1091.624 80883.18 0.72197 0.00039479 0.50561 0.00027648 1.2276 0.00067127 546.819446863969 556.827956348788 97.393 0.58737 97.393 97.06 97.647 7.6294E-06 104 29 6 0 0 0 0.030108 1 54765 52.482 35.096 1 0.38498 0.32392 0 11598000 8335500 3262200 29761 1665 11275 11580 46453 46453 RLSFAVPFR 9 0 2 Unmodified _RLSFAVPFR_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 364.8816 3 364.881943 1091.624 100664.9 0.26594 9.7037E-05 0.3144 0.00011472 0.58034 0.00021175 364.881879845568 371.554187348401 97.397 0.33902 97.397 97.203 97.542 0 49 16 5 0 0 0 0.040069 1 54779 19.762 16.015 1 0.24547 0.22407 0 2187600 1683500 504130 29762 1665 11275 11580 46454 46454 RLSLSTSK 8 1 1 Unmodified _RLSLSTSK_ 0 0 1 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2776 2 446.266542 890.51853 91194.38 -0.18695 -8.343E-05 0.25297 0.00011289 0.066017 2.9461E-05 446.266344240993 455.277856324613 21.832 0.2956 21.832 21.676 21.971 0 76 18 6 0 0 0 0.0043537 1 8020 99.442 26.193 1 2.5067 2.9419 0 33015000 10208000 22808000 29763 1611 11276 11581 46455 46455 RLSPPECLNASLLGGVLR 18 0 2 Unmodified _RLSPPECLNASLLGGVLR_ 0 0 1 Q96SH1;P05549;A8K557;Q6VUC0;Q92481;C9JXZ2;H7C5E5;C1K3N0;B2R9E2;B2RAN6;Q92754;H7C4N4 Q96SH1 Q96SH1 TFAP2A;TFAP2E;TFAP2B;TFAP2C Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta;Transcription factor AP-2 gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3629 3 651.363048 1951.06732 73782 0.99225 0.00064631 -0.11152 -7.2638E-05 0.88073 0.00057368 651.363549436486 658.035468954104 122.58 0.26587 122.58 122.36 122.63 0 34 13 5 0 0 0 0.059038 1 73109 8.4277 8.4277 1 0.69847 0.6391 0 1716000 973640 742390 29764 1448 11277 11582 46456 46456 RLSVER 6 0 2 Unmodified _RLSVER_ 0 0 1 P11388;J3KTB7 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 380.2273 2 380.22722 758.439886 95993.48 0.016215 6.1654E-06 -0.044951 -1.7091E-05 -0.028736 -1.0926E-05 380.227175945848 390.235380827642 17.697 0.41392 17.697 17.577 17.991 0 54 15 8 0 0 0 4.155E-05 1 4814 155.53 0 1 0.67777 0.73968 0 165780000 97795000 67987000 29765 1471 11278 11583 46457 46457 RLSYNTASNK 10 1 1 Unmodified _RLSYNTASNK_ 0 0 1 A0A024RDH8;P49207 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.3128 2 577.301644 1152.58874 78907.3 0.27609 0.00015939 -0.007983 -4.6086E-06 0.26811 0.00015478 577.301689150504 586.31279458204 17.328 0.78738 17.328 16.962 17.749 0 124 26 9 0 0 0 2.9605E-09 1 4530 138.25 93.165 1 0.8116 0.9797 0 150290000 80362000 69930000 29766 386 11279 11584 46458 46458 RLSYNTASNK 10 1 1 Unmodified _RLSYNTASNK_ 0 0 1 A0A024RDH8;P49207 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.313 2 577.301644 1152.58874 79185.45 0.13771 7.9498E-05 0.19169 0.00011066 0.32939 0.00019016 577.301789886976 586.31295401601 18.264 0.55948 18.264 17.923 18.482 0 117 29 10 0 0 0 0.0054983 1 4307 67.704 37.537 1 0.96843 0.8394 0 16297000 8135300 8161800 29767 386 11279 11584 46459 46459 RLTLDHEK 8 1 1 Unmodified _RLTLDHEK_ 0 0 1 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 337.8577 3 337.857574 1010.55089 104672.6 -0.14159 -4.7837E-05 0.99501 0.00033617 0.85342 0.00028833 337.857589023386 344.200379294402 19.56 0.49896 19.56 19.329 19.828 0 80 35 4 0 0 0 0.023278 1 6140 29.743 26.043 1 1.0593 1.1596 0 16954000 5450300 11504000 29768 924 11280 11585 46460 46460 RLTLQQK 7 1 1 Unmodified _RLTLQQK_ 0 0 1 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;Q7L5W4;Q9P172;Q86VH2 O75643 O75643 SNRNP200;KIF27 U5 small nuclear ribonucleoprotein 200 kDa helicase;Kinesin-like protein KIF27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.7769 2 443.777077 885.5396 90234.16 -0.11757 -5.2173E-05 -0.12935 -5.7401E-05 -0.24691 -0.00010957 443.776955834055 452.788214776508 19.436 0.47623 19.436 19.164 19.64 0 57 19 5 0 0 0 0.023978 1 5806 100.37 3.2968 1 0.98252 1.1233 0 21714000 12076000 9637500 29769 1411 11281 11586 46461 46461 RLTVEFMHYIIAAR 14 0 2 Unmodified _RLTVEFMHYIIAAR_ 0 0 1 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6;H7BYY8 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.3183 3 573.98362 1718.92903 81297.97 0.75038 0.00043071 0.69256 0.00039752 1.4429 0.00082822 573.983347497949 580.656244962071 114.71 0.33669 114.71 114.59 114.93 0 35 14 5 0 0 0 0.04311 1 67096 11.768 7.597 1 1.5956 1.4605 0 1639600 541620 1098000 29770 886 11282 11587 46462 46462 RLTVNEAVK 9 1 1 Unmodified _RLTVNEAVK_ 0 0 1 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.3174 2 515.306198 1028.59784 84028.13 0.24234 0.00012488 -0.27587 -0.00014216 -0.033528 -1.7277E-05 515.306159501172 524.317212013402 25.001 0.31791 25.001 24.835 25.153 0 40 10 6 0 0 0 0.038738 1 10683 48.785 24.631 1 2.5165 2.9178 0 35579000 11355000 24223000 29771 1754 11283 11588 46463 46463 RLVEVDSSR 9 0 2 Unmodified _RLVEVDSSR_ 0 0 1 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7919 2 530.790912 1059.56727 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.098 1 22.098 21.598 22.598 0 0 0 0 0.021491 1 8148 66.962 25.514 1 29772 1682 11284 11589 46464 46464 RLVIQDK 7 1 1 Unmodified _RLVIQDK_ 0 0 1 A2RUM7;P46777;Q59GX9;Q9BUV4;R4GNJ2 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.2714 2 436.271627 870.528701 88771.11 -0.015015 -6.5504E-06 -0.2551 -0.00011129 -0.27012 -0.00011784 436.271509839509 445.282700017231 22.49 1.4027 22.49 22.263 23.666 -1.9073E-06 353 77 9 0 0 0 4.7669E-07 1 8463 161.12 78.45 1 0.98808 1.2048 0 718880000 351420000 367460000 29773 653 11285 11590 46465 46465 RLVIQDK 7 1 1 Unmodified _RLVIQDK_ 0 0 1 A2RUM7;P46777;Q59GX9;Q9BUV4;R4GNJ2 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.2714 2 436.271627 870.528701 88888.31 -0.35417 -0.00015451 -0.34234 -0.00014935 -0.6965 -0.00030387 436.271676176641 445.282574725483 21.963 1.417 21.963 21.762 23.179 -1.9073E-06 245 62 10 0 0 0 7.2085E-11 2 7952 166.78 72.12 1 0.96742 1.1585 0 1280200000 632330000 647830000 29774 653 11285 11590 46466;46467 46467 RLVIQDK 7 1 1 Unmodified _RLVIQDK_ 0 0 1 A2RUM7;P46777;Q59GX9;Q9BUV4;R4GNJ2 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 436.2719 2 436.271627 870.528701 89382.9 -0.13827 -6.0325E-05 0.14319 6.2472E-05 0.0049201 2.1465E-06 436.271664179171 445.282864725978 23.838 1.341 23.838 23.62 24.961 0 284 74 8 0 0 0 0.017023 2 8170 121.31 47.989 1 0.90662 0.81086 0 78669000 41377000 37292000 29775 653 11285 11590 46468;46469 46469 RLVIQDK 7 1 1 Unmodified _RLVIQDK_ 0 0 1 A2RUM7;P46777;Q59GX9;Q9BUV4;R4GNJ2 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 436.2715 2 436.271627 870.528701 87992.91 -0.15249 -6.6529E-05 0.032068 1.399E-05 -0.12043 -5.2539E-05 436.271694469101 445.282772353333 23.515 1.4908 23.515 23.283 24.774 0 275 82 8 0 0 0 0.018094 2 7459 110.14 55.349 1 0.86406 0.73743 0 67781000 34663000 33118000 29776 653 11285 11590 46470;46471 46471 RLVQSPNSYFMDVK 14 1 1 Oxidation (M) _RLVQSPNSYFM(ox)DVK_ RLVQSPNSYFM(1)DVK RLVQSPNSYFM(49.99)DVK 0 1 1 H0YMV8;Q71UM5;C9JLI6;A4D1G5;P42677;Q5T4L4 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.6292 3 567.287257 1698.83994 78219.56 0.41028 0.00023275 0.048432 2.7475E-05 0.45871 0.00026022 567.287145242784 573.294896954746 77.712 0.58315 77.712 77.465 78.048 0 216 39 8 0 0 0 0.00067001 2 41558 49.988 45.597 1 0.97178 0.83822 0 12764000 6242000 6521600 29777 1298;1564 11286 11591 46472;46473 46472 988 RLVQSPNSYFMDVK 14 1 1 Oxidation (M) _RLVQSPNSYFM(ox)DVK_ RLVQSPNSYFM(1)DVK RLVQSPNSYFM(53.99)DVK 0 1 1 H0YMV8;Q71UM5;C9JLI6;A4D1G5;P42677;Q5T4L4 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.6224 3 567.287257 1698.83994 80275.93 0.53618 0.00030417 0.18465 0.00010475 0.72083 0.00040892 567.287094057507 573.295056458692 77.868 0.54313 77.868 77.568 78.112 0 188 34 7 0 0 0 0.00047787 1 40844 53.995 47.963 1 0.9819 0.82684 0 7951300 3955100 3996100 29778 1298;1564 11286 11591 46474 46474 988 RLVQSPNSYFMDVK 14 1 1 Unmodified _RLVQSPNSYFMDVK_ 0 0 1 H0YMV8;Q71UM5;C9JLI6;A4D1G5;P42677;Q5T4L4 H0YMV8;P42677 P42677 RPS27L;LOC392748;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 851.442 2 842.42979 1682.84503 65250.32 0.56779 0.00047832 0.17672 0.00014887 0.74451 0.00062719 842.430327291378 851.440636281874 88.036 0.72426 88.036 87.589 88.313 7.6294E-06 201 42 9 0 0 0 0.058082 1 47658 29.805 29.805 1 1.795 1.503 0 5662900 1695200 3967700 29779 1298;1564 11286 11592 46475 46475 RLVTTGVLK 9 1 1 Unmodified _RLVTTGVLK_ 0 0 1 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.8333 2 493.821484 985.628415 85903.8 0.43735 0.00021597 0.065827 3.2507E-05 0.50318 0.00024848 493.821665325131 502.832573472366 39.164 0.6469 39.164 39.035 39.682 0 222 52 8 0 0 0 0.027354 1 20335 53.965 36.57 1 1.2002 1.4544 0 273200000 101820000 171380000 29780 1451 11287 11593 46476 46476 RLVTTGVLK 9 1 1 Unmodified _RLVTTGVLK_ 0 0 1 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.8217 2 493.821484 985.628415 85260.09 0.097237 4.8018E-05 0.27781 0.00013719 0.37504 0.00018521 493.821625004902 502.832740560235 37.256 0.75076 37.256 37.014 37.765 3.8147E-06 283 61 8 0 0 0 0.001711 1 19252 91.085 91.085 1 1.3195 1.5673 0 347690000 157400000 190290000 29781 1451 11287 11593 46477 46477 RLVTTGVLK 9 1 1 Unmodified _RLVTTGVLK_ 0 0 1 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.8217 2 493.821484 985.628415 84987.76 0.25116 0.00012403 0.033378 1.6483E-05 0.28454 0.00014051 493.821465045768 502.832635157693 43.783 1.4587 43.783 43.512 44.971 -3.8147E-06 411 105 9 0 0 0 0.019436 1 20622 58.23 58.23 1 0.49266 0.43513 0 41913000 26726000 15187000 29782 1451 11287 11593 46478 46478 RLYSLALHPNAFK 13 1 1 Unmodified _RLYSLALHPNAFK_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.6254 3 510.624421 1528.85143 86570.82 0.30809 0.00015732 0.31591 0.00016131 0.62399 0.00031863 510.624691684819 516.631718466424 79.785 0.59518 79.785 79.57 80.165 0 112 36 5 0 0 0 0.035041 2 42942 20.124 20.124 1 0.30052 0.27457 0 1561800 1074800 487030 29783 1665 11288 11594 46479;46480 46479 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(106.32)ATEVAADALGEEWK 0 1 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.4327 2 896.930351 1791.84615 64166.56 0.50605 0.00045389 -0.4461 -0.00040012 0.059945 5.3766E-05 896.930078093684 905.941423465326 74.397 1.0622 74.397 73.987 75.049 7.6294E-06 333 88 6 0 0 0 2.5824E-08 2 43500 106.32 106.32 1 1.0123 1.1729 0 29234000 16482000 12752000 29784 649 11289 11595 46481;46482 46481 504 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(84.65)ATEVAADALGEEWK 0 1 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.2899 3 598.289326 1791.84615 75593.66 0.52183 0.00031221 -0.24089 -0.00014412 0.28094 0.00016808 598.289333990676 604.296830892951 74.382 1.523 74.382 73.845 75.368 0 882 128 10 0 0 0 1.2844E-05 3 43551 84.653 84.653 1 0.94344 1.1407 0 192550000 92688000 99860000 29785 649 11289 11595 46483;46484;46485 46483 504 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(101.75)ATEVAADALGEEWK 0 1 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.9296 2 896.930351 1791.84615 NaN NaN NaN -0.27094 -0.00024301 NaN NaN NaN NaN 72.34 0.87842 72.34 72.113 72.992 7.6294E-06 0 0 0 3.6267E-09 1 43456 101.75 101.75 1 NaN NaN 0 25111000 25111000 0 29786 649 11289 11595 46486 46486 504 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(65.29)ATEVAADALGEEWK 0 1 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.9409 2 896.930351 1791.84615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.135 1 72.135 71.635 72.635 0 0 0 0 0.00047837 1 43289 65.295 38.157 1 29787 649 11289 11595 46487 46487 504 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(42.23)ATEVAADALGEEWK 0 1 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.8445 3 598.289326 1791.84615 75830.59 0.67523 0.00040398 -0.054679 -3.2714E-05 0.62055 0.00037127 598.289546957925 604.297048090529 72.5 1.667 72.5 71.934 73.601 0 801 146 9 0 0 0 0.0026878 1 43634 42.226 42.226 1 0.90245 1.0675 0 181730000 93194000 88533000 29788 649 11289 11595 46488 46488 504 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(79.51)ATEVAADALGEEWK 0 1 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.2898 3 598.289326 1791.84615 74705.94 0.4871 0.00029143 0.051541 3.0837E-05 0.53864 0.00032226 598.289689255206 604.296986877618 84.111 1.7222 84.111 83.749 85.472 0 924 130 11 0 0 0 3.4092E-05 2 46138 79.514 74.196 1 0.96141 0.85776 0 69603000 35426000 34177000 29789 649 11289 11595 46489;46490 46490 504 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(51.13)ATEVAADALGEEWK 0 1 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 897.4325 2 896.930351 1791.84615 63818.91 0.36806 0.00033012 0.064785 5.8108E-05 0.43285 0.00038823 897.432005814127 905.941811778663 84.114 1.1612 84.114 83.786 84.947 0 464 92 9 0 0 0 0.00089498 1 46221 51.135 51.135 1 1.0012 0.86962 0 18115000 9095400 9019200 29790 649 11289 11595 46491 46491 504 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(46.28)ATEVAADALGEEWK 0 1 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 905.9409 2 896.930351 1791.84615 64400.84 0.40292 0.00036139 0.0010674 9.5736E-07 0.40399 0.00036235 896.930440428176 905.941778949629 84.169 1.3289 84.169 83.801 85.13 0 541 102 8 0 0 0 0.0027292 2 45051 46.282 46.282 1 0.92559 0.78478 0 17531000 8919600 8611100 29791 649 11289 11595 46492;46493 46492 504 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(63.46)ATEVAADALGEEWK 0 1 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.2973 3 598.289326 1791.84615 74988.8 0.7318 0.00043783 -0.072503 -4.3378E-05 0.6593 0.00039445 598.623830688704 604.296891146899 84.178 1.6866 84.178 83.811 85.498 0 844 125 10 0 0 0 5.1858E-05 2 45337 63.46 63.46 1 0.98775 0.84234 0 57744000 29469000 28275000 29792 649 11289 11595 46494;46495 46494 504 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(59.9)ATEVAADALGEEWK 0 1 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.2969 3 598.289326 1791.84615 76761.97 0.60817 0.00036386 0.53957 0.00032282 1.1477 0.00068668 598.289270152285 604.297283163593 94.886 0.3519 94.886 94.718 95.07 -7.6294E-06 96 21 6 0 0 0 6.838E-05 1 52270 59.9 59.9 1 1.8507 1.5568 0 7495700 2361000 5134800 29793 649 11289 11595 46496 46496 504 RMATEVAADALGEEWK 16 1 1 Unmodified _RMATEVAADALGEEWK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.9592 3 592.957688 1775.85123 76883.76 0.67383 0.00039956 0.30798 0.00018262 0.98181 0.00058217 592.957791917086 598.965602864096 95.024 0.73404 95.024 94.833 95.567 0 294 51 10 0 0 0 3.8018E-05 3 53184 70.335 59.481 1 1.7837 1.5706 0 35948000 13053000 22895000 29794 649 11289 11596 46497;46498;46499 46497 RMATEVAADALGEEWK 16 1 1 Unmodified _RMATEVAADALGEEWK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.2919 3 592.957688 1775.85123 76638.2 0.6109 0.00036224 0.41099 0.0002437 1.0219 0.00060594 592.957833603296 598.965640911237 94.88 0.57133 94.88 94.66 95.231 0 221 38 10 0 0 0 3.8771E-05 1 52268 62.203 57.734 1 1.7289 1.4696 0 29638000 11482000 18156000 29795 649 11289 11596 46500 46500 RMATEVAADALGEEWK 16 1 1 Unmodified _RMATEVAADALGEEWK_ 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 889.4329 2 888.932893 1775.85123 63052.63 0.25054 0.00022272 0.078696 6.9956E-05 0.32924 0.00029267 888.932459472513 897.945268005573 94.879 0.639 94.879 94.471 95.11 0 148 40 6 0 0 0 7.0007E-05 2 52285 84.297 84.297 1 1.5194 1.2858 0 11885000 4497200 7387700 29796 649 11289 11596 46501;46502 46502 RMGESDDSILR 11 0 2 Oxidation (M) _RM(ox)GESDDSILR_ RM(1)GESDDSILR RM(47.3)GESDDSILR 0 1 1 Q8WVC2;Q6FGH5;P63220 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.8151 2 647.806433 1293.59831 73982.2 0.64708 0.00041918 -0.34607 -0.00022418 0.30101 0.00019499 647.806189779157 657.814764560289 26.591 0.42518 26.591 26.313 26.738 0 125 24 7 0 0 0 0.031218 1 11824 47.302 27.312 1 1.5703 1.7071 0 45630000 18676000 26953000 29797 1655 11290 11597 46503 46503 1433 RMVVPAALK 9 1 1 Oxidation (M) _RM(ox)VVPAALK_ RM(1)VVPAALK RM(55.68)VVPAALK 0 1 1 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.8142 2 500.802237 999.589921 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.306 1 31.306 30.806 31.806 -1.9073E-06 0 0 0 0.011111 1 15434 55.676 28.151 1 29798 1558 11291 11598 46504 46504 1309 RMVVPAALK 9 1 1 Oxidation (M) _RM(ox)VVPAALK_ RM(1)VVPAALK RM(63.48)VVPAALK 0 1 1 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.8151 2 500.802237 999.589921 85371.15 0.61189 0.00030644 0.16133 8.0795E-05 0.77322 0.00038723 500.802333850054 509.813436922013 29.995 0.51118 29.995 29.666 30.177 0 184 39 6 0 0 0 0.015501 2 14496 63.48 63.48 1 1.292 1.5154 0 57716000 23169000 34547000 29799 1558 11291 11598 46505;46506 46505 1309 RMVVPAALK 9 1 1 Oxidation (M) _RM(ox)VVPAALK_ RM(1)VVPAALK RM(53.17)VVPAALK 0 1 1 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.8132 2 500.802237 999.589921 85081.22 0.14165 7.0941E-05 0.14022 7.0222E-05 0.28187 0.00014116 500.802309447722 509.813502722069 30.497 0.86336 30.497 30.166 31.029 -1.9073E-06 216 72 4 0 0 0 0.039725 2 15116 53.166 53.166 1 1.221 1.4282 0 51385000 20997000 30388000 29800 1558 11291 11598 46507;46508 46508 1309 RNAAPPPSNTEAPPGETR 18 0 2 Unmodified _RNAAPPPSNTEAPPGETR_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.9641 2 931.461195 1860.90784 65395.91 0.36791 0.0003427 0.019996 1.8626E-05 0.38791 0.00036132 931.460867233663 941.469801531974 20.597 0.26602 20.597 20.471 20.737 0 35 11 4 0 0 0 0.0041697 1 7017 35.737 22.756 1 0.55729 0.61438 0 11630000 7090700 4539000 29801 993 11292 11599 46509 46509 RNAAPPPSNTEAPPGETR 18 0 2 Unmodified _RNAAPPPSNTEAPPGETR_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.6445 3 621.309889 1860.90784 NaN NaN NaN 0.13614 8.4585E-05 NaN NaN NaN NaN 20.473 0.43996 20.473 20.257 20.697 0 0 0 0 1.0456E-17 1 6761 107.63 102.33 1 NaN NaN 0 10974000 10974000 0 29802 993 11292 11599 46510 46510 RNAAPPPSNTEAPPGETR 18 0 2 Unmodified _RNAAPPPSNTEAPPGETR_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.3104 3 621.309889 1860.90784 NaN NaN NaN 0.3203 0.00019901 NaN NaN NaN NaN 22.596 0.48355 22.596 22.413 22.896 0 0 0 0 0.016642 1 7368 20.814 16.91 1 NaN NaN 0 1159500 1159500 0 29803 993 11292 11599 46511 46511 RNAAPPPSNTEAPPGETR 18 0 2 Unmodified _RNAAPPPSNTEAPPGETR_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.3089 3 621.309889 1860.90784 NaN NaN NaN 0.33715 0.00020947 NaN NaN NaN NaN 22.636 0.46987 22.636 22.397 22.867 -1.9073E-06 0 0 0 0.00051733 1 6837 38.417 33.1 1 NaN NaN 0 1184900 1184900 0 29804 993 11292 11599 46512 46512 RNCSVTGIDDLEQIPADTTDINHLETQPVSSK 32 1 1 Unmodified _RNCSVTGIDDLEQIPADTTDINHLETQPVSSK_ 0 0 1 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 889.4328 4 889.182331 3552.70022 64888.74 0.3253 0.00028925 0.035365 3.1446E-05 0.36066 0.0003207 889.432802722621 894.440376812979 112.57 0.42208 112.57 112.43 112.85 0 78 20 8 0 0 0 0.05616 1 64510 4.532 4.532 1 1.1393 0.95671 0 6786300 3603000 3183300 29805 1928 11293 11600 46513 46513 RNDFQLIGIQDGYLSLLQDSGEVR 24 0 2 Unmodified _RNDFQLIGIQDGYLSLLQDSGEVR_ 0 0 1 I3L397;I3L504;P63241 I3L397 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.4742 3 912.803229 2735.38786 NaN NaN NaN 0.37306 0.00034053 NaN NaN NaN NaN 129.58 0.22 129.58 129.46 129.68 0 0 0 0 0.001411 1 86578 34.437 27.86 1 NaN NaN 0 7564300 0 7564300 29806 1322 11294 11601 46514 46514 RNDFQLIGIQDGYLSLLQDSGEVR 24 0 2 Unmodified _RNDFQLIGIQDGYLSLLQDSGEVR_ 0 0 1 I3L397;I3L504;P63241 I3L397 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.1364 3 912.803229 2735.38786 NaN NaN NaN -0.729 -0.00066543 NaN NaN NaN NaN 130.55 0.82315 130.55 129.9 130.73 0 0 0 0 0.0070899 1 86820 28.951 25.682 1 NaN NaN 0 9575600 9575600 0 29807 1322 11294 11601 46515 46515 RNDFQLIGIQDGYLSLLQDSGEVR 24 0 2 Unmodified _RNDFQLIGIQDGYLSLLQDSGEVR_ 0 0 1 I3L397;I3L504;P63241 I3L397 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 919.8093 3 912.803229 2735.38786 NaN NaN NaN 1.3552 0.001237 NaN NaN NaN NaN 134.57 0.16632 134.57 134.45 134.62 0 0 0 0 1.0598E-06 1 82210 53.865 36.363 1 NaN NaN 0 18808000 0 18808000 29808 1322 11294 11601 46516 46516 RNDFQLIGIQDGYLSLLQDSGEVR 24 0 2 Unmodified _RNDFQLIGIQDGYLSLLQDSGEVR_ 0 0 1 I3L397;I3L504;P63241 I3L397 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 918.9407 3 912.803229 2735.38786 62322.6 0.60721 0.00055426 0.61768 0.00056382 1.2249 0.0011181 913.4723355559 919.810130298619 134.61 0.48203 134.61 134.28 134.76 0 45 15 8 0 0 0 0.041585 1 81292 16.447 16.447 1 1.3954 1.3035 0 37919000 18050000 19868000 29809 1322 11294 11601 46517 46517 RNEEEESTSQIERPLSQEPAK 21 1 2 Unmodified _RNEEEESTSQIERPLSQEPAK_ 0 0 2 P42696;A2A2V2;Q5TCT4 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.4111 3 819.733251 2456.17792 67273.36 0.52398 0.00042952 0.04083 3.347E-05 0.56481 0.00046299 819.733107030891 829.41136870146 37.698 0.46224 37.698 37.496 37.958 0 211 35 8 0 0 0 0.0056577 1 19555 25.207 6.1707 1 1.0331 1.1708 0 44976000 20691000 24284000 29810 1566 11295 11602 46518 46518 RNEIDAEPPAK 11 1 1 Unmodified _RNEIDAEPPAK_ 0 0 1 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.3329 2 620.320034 1238.62551 76457.43 -0.0054799 -3.3993E-06 0.067936 4.2142E-05 0.062456 3.8743E-05 620.320074738567 629.331346539057 21.949 0.72434 21.949 21.704 22.428 0 263 43 10 0 0 0 0.0023648 2 7985 67.704 67.704 1 0.94093 1.1439 0 453240000 242760000 210490000 29811 1934 11296 11603 46519;46520 46519 RNEIDAEPPAK 11 1 1 Unmodified _RNEIDAEPPAK_ 0 0 1 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.8822 3 413.882448 1238.62551 93788.71 -0.43166 -0.00017866 0.18248 7.5526E-05 -0.24918 -0.00010313 413.882466483713 419.890051273082 21.949 0.45269 21.949 21.744 22.197 0 107 25 7 0 0 0 1.1334E-08 2 8097 91.694 83.807 1 1.0197 1.2046 0 37447000 18477000 18970000 29812 1934 11296 11603 46521;46522 46522 RNEIDAEPPAK 11 1 1 Unmodified _RNEIDAEPPAK_ 0 0 1 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.3316 2 620.320034 1238.62551 76124.09 0.44633 0.00027687 -0.41458 -0.00025717 0.031755 1.9698E-05 620.319950662783 629.330937031613 21.688 0.9013 21.688 21.408 22.309 0 239 42 10 0 0 0 8.2025E-05 1 7662 99.343 84.083 1 0.95779 1.1426 0 700320000 345150000 355170000 29813 1934 11296 11603 46523 46523 RNEIDAEPPAK 11 1 1 Unmodified _RNEIDAEPPAK_ 0 0 1 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 419.8897 3 413.882448 1238.62551 93617.8 0.12994 5.378E-05 -0.26145 -0.00010821 -0.13151 -5.4429E-05 413.882276238225 419.889806326583 21.689 0.4235 21.689 21.491 21.915 1.9073E-06 100 20 7 0 0 0 0.0001141 2 7787 61.435 56.864 1 0.97987 1.1439 0 47414000 23914000 23499000 29814 1934 11296 11603 46524;46525 46524 RNEIDAEPPAK 11 1 1 Unmodified _RNEIDAEPPAK_ 0 0 1 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.3311 2 620.320034 1238.62551 76110.41 0.45085 0.00027967 -0.37294 -0.00023134 0.07791 4.8329E-05 620.319854320965 629.331059123803 23.915 0.85916 23.915 23.643 24.503 0 309 48 11 0 0 0 0.0090966 1 8157 56.225 56.225 1 1.38 1.2366 0 86497000 35796000 50701000 29815 1934 11296 11603 46526 46526 RNEIDAEPPAK 11 1 1 Unmodified _RNEIDAEPPAK_ 0 0 1 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 419.8896 3 413.882448 1238.62551 92626.3 -0.2746 -0.00011365 0.034463 1.4264E-05 -0.24013 -9.9386E-05 413.882441892784 419.890013883048 23.906 0.44136 23.906 23.68 24.121 0 123 24 7 0 0 0 0.0063477 1 8255 35.204 33.36 1 1.217 1.0135 0 6151100 2606600 3544600 29816 1934 11296 11603 46527 46527 RNEIDAEPPAK 11 1 1 Unmodified _RNEIDAEPPAK_ 0 0 1 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 629.3309 2 620.320034 1238.62551 75710.05 0.42231 0.00026197 -0.39227 -0.00024334 0.030034 1.8631E-05 620.319874490556 629.330994424657 23.817 1.6117 23.817 23.505 25.117 0 413 89 10 0 0 0 0.0043353 2 7582 61.353 61.353 1 1.4234 1.2149 0 69144000 28383000 40760000 29817 1934 11296 11603 46528;46529 46528 RNEIDAEPPAK 11 1 1 Unmodified _RNEIDAEPPAK_ 0 0 1 Q8TDN6;A0JLQ5;B4E0B8;Q9NUW4 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 419.8899 3 413.882448 1238.62551 92603.19 -0.41888 -0.00017337 0.26607 0.00011012 -0.15281 -6.3244E-05 413.882452187728 419.890042425767 23.826 0.49315 23.826 23.597 24.09 -1.9073E-06 158 31 7 0 0 0 0.021516 2 7728 22.885 22.885 1 1.3502 1.1371 0 4163600 1667900 2495700 29818 1934 11296 11603 46530;46531 46530 RNENQLIIFADDTYPR 16 0 2 Unmodified _RNENQLIIFADDTYPR_ 0 0 1 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.0005 3 655.665673 1963.97519 80031.34 0.6479 0.00042481 0.55646 0.00036485 1.2044 0.00078966 655.999802427522 663.007408452783 107.15 0.388 107.15 106.94 107.33 0 84 24 7 0 0 0 0.050228 1 60534 12.934 12.934 1 0.86562 0.77454 0 2214500 1211200 1003300 29819 764 11297 11604 46532 46532 RNFILDQTNVSAAAQR 16 0 2 Unmodified _RNFILDQTNVSAAAQR_ 0 0 1 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3212 3 601.986858 1802.93874 77326.84 0.6761 0.00040701 -0.25782 -0.00015521 0.41828 0.0002518 601.98660340983 608.659056653754 67.603 0.93769 67.603 67.148 68.085 0 493 80 9 0 0 0 5.3605E-06 2 38921 85.988 60.122 1 1.2718 1.3852 0 85383000 37743000 47640000 29820 999 11298 11605 46533;46534 46534 RNFILDQTNVSAAAQR 16 0 2 Unmodified _RNFILDQTNVSAAAQR_ 0 0 1 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.6594 3 601.986858 1802.93874 77327.77 0.40697 0.00024499 -0.66707 -0.00040157 -0.2601 -0.00015657 601.986363481902 608.658983670047 76.791 0.61359 76.791 76.521 77.135 0 234 37 9 0 0 0 7.3472E-05 2 40946 55.546 55.546 1 0.68008 0.56346 0 20965000 12625000 8340600 29821 999 11298 11605 46535;46536 46536 RNFILDQTNVSAAAQR 16 0 2 Unmodified _RNFILDQTNVSAAAQR_ 0 0 1 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.3204 3 601.986858 1802.93874 78242.96 0.50515 0.00030409 -0.84526 -0.00050884 -0.34011 -0.00020474 601.986266572231 608.658987364154 76.999 0.53395 76.999 76.748 77.282 0 249 34 9 0 0 0 6.2958E-05 2 40258 57.499 56.339 1 0.677 0.6244 0 16521000 9946200 6574800 29822 999 11298 11605 46537;46538 46537 RNIPPYFVALVPQEEELDDQK 21 1 1 Unmodified _RNIPPYFVALVPQEEELDDQK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.4271 3 834.095461 2499.26455 66205.51 0.99111 0.00082668 -1.0216 -0.00085208 -0.030449 -2.5397E-05 834.763434224369 840.437031554358 112.12 0.65431 112.12 111.74 112.39 0 224 47 7 0 0 0 0.0010917 1 70706 28.237 25.272 1 0.41891 0.4673 0 20351000 12970000 7381100 29823 82 11299 11606 46539 46539 RNIPPYFVALVPQEEELDDQK 21 1 1 Unmodified _RNIPPYFVALVPQEEELDDQK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.7643 3 834.095461 2499.26455 67317.35 0.79837 0.00066592 0.51424 0.00042893 1.3126 0.0010948 834.429680589012 840.437560222772 122.22 0.86237 122.22 121.93 122.79 0 205 41 9 0 0 0 0.00045241 2 72776 33.45 30.485 1 0.31277 0.27185 0 18745000 14603000 4142000 29824 82 11299 11606 46540;46541 46540 RNIPPYFVALVPQEEELDDQK 21 1 1 Unmodified _RNIPPYFVALVPQEEELDDQK_ 0 0 1 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 834.4312 3 834.095461 2499.26455 66903.84 0.94951 0.00079198 0.61687 0.00051453 1.5664 0.0013065 834.429692451727 840.105269728502 121.98 0.82704 121.98 121.68 122.51 0 195 39 9 0 0 0 0.00019641 2 71724 35.538 32.572 1 0.3153 0.26755 0 20715000 14771000 5944100 29825 82 11299 11606 46542;46543 46542 RNIYLMDTSGK 11 1 1 Oxidation (M) _RNIYLM(ox)DTSGK_ RNIYLM(1)DTSGK RNIYLM(58.59)DTSGK 0 1 1 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.3314 2 657.329544 1312.64454 75812.28 0.88923 0.00058452 0.54139 0.00035587 1.4306 0.00094039 657.329920551807 666.34107905174 26.173 0.44369 26.173 25.836 26.28 0 34 16 4 0 0 0 0.0095039 1 11668 58.592 41.96 1 0.97259 1.0785 0 9562500 4670800 4891700 29826 1525 11300 11607 46544 46544 1289 RNLQQELETQNQK 13 1 1 Unmodified _RNLQQELETQNQK_ 0 0 1 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.922 2 814.921175 1627.8278 68704.31 1.096 0.00089312 -0.41813 -0.00034074 0.67784 0.00055238 814.920600214082 823.93177618215 28.595 0.20191 28.595 28.498 28.7 -1.9073E-06 50 11 6 0 0 0 1.4204E-06 3 13536 111.63 89.637 1 0.91457 1.0004 0 16826000 8280500 8545300 29827 1312 11301 11608 46545;46546;46547 46546 RNLQQELETQNQK 13 1 1 Unmodified _RNLQQELETQNQK_ 0 0 1 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.9213 2 814.921175 1627.8278 68279.68 0.34017 0.00027721 0.23125 0.00018845 0.57142 0.00046566 814.921605296198 823.932854287783 27.656 0.2192 27.656 27.576 27.795 1.9073E-06 44 11 6 0 0 0 2.2532E-18 2 12926 138.99 138.99 1 1.1761 1.3441 0 21444000 7859700 13584000 29828 1312 11301 11608 46548;46549 46548 RNLQQELETQNQK 13 1 1 Unmodified _RNLQQELETQNQK_ 0 0 1 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.9581 3 543.616542 1627.8278 81980.59 0.30696 0.00016687 0.17461 9.4922E-05 0.48158 0.00026179 543.951045565246 549.623939559322 32.673 0.24395 32.673 32.552 32.796 0 48 12 6 0 0 0 0.0095542 1 14150 31.827 31.827 1 1.0975 0.93492 0 2902200 1450900 1451300 29829 1312 11301 11608 46550 46550 RNLQQELETQNQK 13 1 1 Unmodified _RNLQQELETQNQK_ 0 0 1 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.9589 3 543.616542 1627.8278 81379.91 0.47124 0.00025618 0.15614 8.4879E-05 0.62738 0.00034105 543.616720848997 549.624058106275 32.786 0.24089 32.786 32.637 32.878 0 31 9 5 0 0 0 0.011108 1 13699 30.483 30.483 1 1.2275 1.0577 0 1941900 840100 1101800 29830 1312 11301 11608 46551 46551 RNPDTQWITK 10 1 1 Unmodified _RNPDTQWITK_ 0 0 1 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8424 2 629.830569 1257.64658 77292.91 0.56912 0.00035845 0.020688 1.303E-05 0.5898 0.00037148 629.830558768897 638.841816133164 35.241 0.84164 35.241 35.027 35.869 0 374 77 8 0 0 0 1.7613E-08 2 17600 123.79 97.854 1 0.63308 0.76344 0 128550000 79672000 48874000 29831 121 11302 11609 46552;46553 46552 RNPDTQWITK 10 1 1 Unmodified _RNPDTQWITK_ 0 0 1 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.8318 2 629.830569 1257.64658 76510.34 0.6589 0.00041499 0.13432 8.4596E-05 0.79321 0.00049959 629.830421971288 638.841900611043 33.8 0.66458 33.8 33.511 34.176 0 253 51 9 0 0 0 1.4136E-05 2 16969 106.4 85.453 1 0.61894 0.73518 0 351000000 215640000 135360000 29832 121 11302 11609 46554;46555 46554 RNPDTQWITK 10 1 1 Unmodified _RNPDTQWITK_ 0 0 1 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.8307 2 629.830569 1257.64658 75453.3 0.32905 0.00020725 0.27338 0.00017218 0.60243 0.00037943 629.830653548896 638.84188258375 39.855 0.7142 39.855 39.578 40.293 0 318 54 10 0 0 0 0.00050097 2 18259 90.827 63.523 1 0.78526 0.69393 0 43026000 24954000 18072000 29833 121 11302 11609 46556;46557 46557 RNPDTQWITK 10 1 1 Unmodified _RNPDTQWITK_ 0 0 1 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.8422 2 629.830569 1257.64658 76996.2 0.35859 0.00022585 0.066706 4.2014E-05 0.42529 0.00026786 629.830470677041 638.84185199441 39.686 0.79261 39.686 39.4 40.192 0 313 62 9 0 0 0 0.001212 2 17596 82.261 56.322 1 0.77602 0.66097 0 44835000 24671000 20164000 29834 121 11302 11609 46558;46559 46558 RNQDLAPNSAEQASILSLVTK 21 1 1 Unmodified _RNQDLAPNSAEQASILSLVTK_ 0 0 1 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63;X6R6Z1;A0A0A0MRL0 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.4117 3 752.404518 2254.19172 NaN NaN NaN -1.6431 -0.0012363 NaN NaN NaN NaN 105.85 0.55071 105.85 105.56 106.11 7.6294E-06 0 0 0 0.045472 1 65703 22.123 13.835 1 NaN NaN 0 5765400 0 5765400 29835 1049 11303 11610 46560 46560 RNQDLAPNSAEQASILSLVTK 21 1 1 Unmodified _RNQDLAPNSAEQASILSLVTK_ 0 0 1 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63;X6R6Z1;A0A0A0MRL0 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.7394 3 752.404518 2254.19172 71028.92 0.49541 0.00037275 0.10653 8.0153E-05 0.60194 0.0004529 752.738700837765 758.412016533597 116.5 0.33297 116.5 116.33 116.66 0 79 13 8 0 0 0 6.9488E-08 1 68430 60.991 60.991 1 0.86546 0.71904 0 5936800 3151200 2785600 29836 1049 11303 11610 46561 46561 RNQDLAPNSAEQASILSLVTK 21 1 1 Unmodified _RNQDLAPNSAEQASILSLVTK_ 0 0 1 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63;X6R6Z1;A0A0A0MRL0 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 752.4072 3 752.404518 2254.19172 70748.01 0.82625 0.00062168 0.2789 0.00020984 1.1051 0.00083152 752.739015526273 758.412138596912 116.28 0.29929 116.28 116.1 116.4 7.6294E-06 93 14 9 0 0 0 0.024161 1 67308 16.06 16.06 1 0.90189 0.75805 0 7162000 3717900 3444100 29837 1049 11303 11610 46562 46562 RNQSFCPTVNLDK 13 1 1 Unmodified _RNQSFCPTVNLDK_ 0 0 1 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.8889 2 789.888289 1577.76202 67658.52 0.79316 0.00062651 -0.25488 -0.00020132 0.53829 0.00042519 789.888214474848 798.899447736351 51.392 0.69287 51.392 51.069 51.762 -3.8147E-06 357 64 9 0 0 0 1.3497E-05 2 28329 111.63 111.63 1 0.71015 0.85973 0 235830000 140010000 95825000 29838 1247 11304 11611 46563;46564 46564 RNQSFCPTVNLDK 13 1 1 Unmodified _RNQSFCPTVNLDK_ 0 0 1 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.9366 3 526.927951 1577.76202 80189.2 0.51043 0.00026896 -0.15084 -7.948E-05 0.35959 0.00018948 526.927985990369 532.935381944468 51.345 0.77077 51.345 51.059 51.829 -3.8147E-06 417 71 9 0 0 0 0.00077987 2 28313 49.482 43.4 1 0.7486 0.90646 0 243400000 138080000 105320000 29839 1247 11304 11611 46565;46566 46565 RNQSFCPTVNLDK 13 1 1 Unmodified _RNQSFCPTVNLDK_ 0 0 1 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.9353 3 526.927951 1577.76202 81793.05 0.32137 0.00016934 -0.21496 -0.00011327 0.10641 5.607E-05 526.927933336508 532.93524706101 49.451 0.5963 49.451 49.166 49.762 -3.8147E-06 329 49 10 0 0 0 1.197E-06 2 27888 91.307 77.561 1 0.71789 0.84991 0 207360000 108380000 98986000 29840 1247 11304 11611 46567;46568 46568 RNQSFCPTVNLDK 13 1 1 Unmodified _RNQSFCPTVNLDK_ 0 0 1 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.8873 2 789.888289 1577.76202 67288.85 0.6365 0.00050276 0.041328 3.2645E-05 0.67782 0.00053541 790.389982553859 798.89925812522 49.48 0.53521 49.48 49.227 49.762 -3.8147E-06 272 44 9 0 0 0 8.8952E-06 1 27744 105.17 105.17 1 0.73351 0.86729 0 169200000 99073000 70127000 29841 1247 11304 11611 46569 46569 RNQSFCPTVNLDK 13 1 1 Unmodified _RNQSFCPTVNLDK_ 0 0 1 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 798.8998 2 789.888289 1577.76202 66001.61 0.51917 0.00041009 -0.1144 -9.0366E-05 0.40477 0.00031972 789.888620742894 798.899343982957 58.766 1.0593 58.766 58.517 59.576 0 496 81 11 0 0 0 0.00020311 2 29913 86.911 69.885 1 0.73077 0.65288 0 74536000 41460000 33076000 29842 1247 11304 11611 46570;46571 46571 RNQSFCPTVNLDK 13 1 1 Unmodified _RNQSFCPTVNLDK_ 0 0 1 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.2624 3 526.927951 1577.76202 81091.63 0.26653 0.00014044 -0.089194 -4.6999E-05 0.17733 9.3441E-05 526.928133962029 532.935378415864 58.764 0.91058 58.764 58.503 59.413 0 455 69 11 0 0 0 0.00077502 2 29844 51.092 51.092 1 0.76544 0.6841 0 75857000 42006000 33851000 29843 1247 11304 11611 46572;46573 46572 RNQSFCPTVNLDK 13 1 1 Unmodified _RNQSFCPTVNLDK_ 0 0 1 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.9352 3 526.927951 1577.76202 80123.34 0.31748 0.00016729 -0.29838 -0.00015722 0.019099 1.0064E-05 526.927985191928 532.935319019373 59.032 1.0521 59.032 58.818 59.87 3.8147E-06 498 83 11 0 0 0 0.00069509 2 29358 39.163 34.533 1 0.75657 0.64501 0 54389000 29606000 24782000 29844 1247 11304 11611 46574;46575 46574 RNSPLTVPMFLSLFSR 16 0 2 Unmodified _RNSPLTVPMFLSLFSR_ 0 0 1 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.6817 3 622.341584 1864.00292 NaN NaN NaN 4.1489 0.0025821 NaN NaN NaN NaN 133.21 0.43948 133.21 132.82 133.26 0 0 0 0 0.0064295 1 89381 40.432 20.196 1 NaN NaN 0 7369500 7369500 0 29845 1997 11305 11612 46576 46576 RNTLQLHR 8 0 2 Unmodified _RNTLQLHR_ 0 0 1 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 353.2093 3 346.536946 1036.58901 103311.7 0.05811 2.0137E-05 0.29255 0.00010138 0.35066 0.00012152 346.537102086583 353.209220567639 19.535 0.30086 19.535 19.379 19.68 -1.9073E-06 81 24 5 0 0 0 0.0030769 1 6139 67.993 36.919 1 0.92579 1.0003 0 19744000 10017000 9726700 29846 121 11306 11613 46577 46577 RNTLQLHR 8 0 2 Unmodified _RNTLQLHR_ 0 0 1 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 346.5368 3 346.536946 1036.58901 102330.7 -0.088018 -3.0501E-05 0.091822 3.182E-05 0.003804 1.3182E-06 346.536995628612 353.209065952622 18.412 0.26285 18.412 18.311 18.574 0 23 7 6 0 0 0 0.0018926 1 5123 82.452 43.49 1 0.92575 1.0437 0 29441000 14928000 14513000 29847 121 11306 11613 46578 46578 RNVELFIATSQK 12 1 1 Unmodified _RNVELFIATSQK_ 0 0 1 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.2727 3 469.264781 1404.77251 103391.3 0.31011 0.00014552 -0.28782 -0.00013507 0.022284 1.0457E-05 469.264459310765 475.27221433883 69.482 0.22861 69.482 69.328 69.556 0 27 14 4 0 0 0 0.058203 1 35605 15.798 15.798 1 2.6516 2.248 0 641970 185910 456060 29848 491 11307 11614 46579 46579 RNVESGEEELASK 13 1 1 Unmodified _RNVESGEEELASK_ 0 0 1 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.3661 2 724.354802 1446.69505 71495.27 0.78847 0.00057113 0.097462 7.0597E-05 0.88593 0.00064173 724.354892696846 733.366030130404 21.692 0.29935 21.692 21.501 21.801 0 84 17 6 0 0 0 4.385E-13 2 7846 126.76 91.254 1 1.95 2.304 0 37761000 13408000 24354000 29849 1972 11308 11615 46580;46581 46580 RNVESGEEELASK 13 1 1 Unmodified _RNVESGEEELASK_ 0 0 1 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.3557 2 724.354802 1446.69505 70712.45 0.62825 0.00045508 0.19078 0.00013819 0.81903 0.00059327 724.354829846888 733.366153044365 21.252 0.31619 21.252 21.127 21.444 0 52 14 5 0 0 0 0.00024945 2 7406 84.169 64.407 1 2.0539 2.4016 0 50710000 17905000 32806000 29850 1972 11308 11615 46582;46583 46583 RNVIFQPVAELK 12 1 1 Unmodified _RNVIFQPVAELK_ 0 0 1 Q01813;Q8WTZ9;O14943;B1APP8;H0Y757;Q49A78 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.4273 2 707.414269 1412.81398 NaN NaN NaN -0.11464 -8.1101E-05 NaN NaN NaN NaN 81.083 1.1093 81.083 80.642 81.752 0 0 0 0 0.03719 1 48199 45.161 24.857 1 NaN NaN 0 7134600 0 7134600 29851 1677 11309 11616 46584 46584 RNVIFQPVAELK 12 1 1 Unmodified _RNVIFQPVAELK_ 0 0 1 Q01813;Q8WTZ9;O14943;B1APP8;H0Y757;Q49A78 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.4267 2 707.414269 1412.81398 NaN NaN NaN -0.23331 -0.00016505 NaN NaN NaN NaN 78.621 0.99302 78.621 78.243 79.236 0 0 0 0 0.0015252 1 47672 77.379 50.865 1 NaN NaN 0 20389000 0 20389000 29852 1677 11309 11616 46585 46585 RPAEDMEEEQAFK 13 1 1 Oxidation (M) _RPAEDM(ox)EEEQAFK_ RPAEDM(1)EEEQAFK RPAEDM(73.63)EEEQAFK 0 1 1 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;S4R457 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.8546 2 798.353945 1594.69334 67342.39 0.87339 0.00069727 -0.21703 -0.00017327 0.65635 0.000524 798.354112509347 807.365223245591 23.856 0.43538 23.856 23.707 24.143 0 74 21 7 0 0 0 0.00031277 2 9683 86.911 58.898 1 3.2253 3.7225 0 28177000 5289500 22887000 29853 102 11310 11617 46586;46587 46587 90 RPAEDMEEEQAFK 13 1 1 Oxidation (M) _RPAEDM(ox)EEEQAFK_ RPAEDM(1)EEEQAFK RPAEDM(116.51)EEEQAFK 0 1 1 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;S4R457 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.5793 3 532.571722 1594.69334 NaN NaN NaN -0.60776 -0.00032368 NaN NaN NaN NaN 23.891 0.41741 23.891 23.707 24.125 0 0 0 0 1.9267E-10 1 9667 116.51 94.313 1 NaN NaN 0 22397000 0 22397000 29854 102 11310 11617 46588 46588 90 RPAEDMEEEQAFK 13 1 1 Oxidation (M) _RPAEDM(ox)EEEQAFK_ RPAEDM(1)EEEQAFK RPAEDM(123.95)EEEQAFK 0 1 1 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;S4R457 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.3647 2 798.353945 1594.69334 66729.22 0.51031 0.00040741 0.43615 0.0003482 0.94645 0.00075561 798.855488330976 807.365674945604 23.457 0.25019 23.457 23.291 23.542 1.9073E-06 58 11 8 0 0 0 3.0825E-09 2 9280 123.95 78.812 1 3.0341 3.5019 0 30066000 7659700 22406000 29855 102 11310 11617 46589;46590 46589 90 RPAEDMEEEQAFK 13 1 1 Oxidation (M) _RPAEDM(ox)EEEQAFK_ RPAEDM(1)EEEQAFK RPAEDM(45.83)EEEQAFK 0 1 1 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2;S4R457 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.817 3 532.571722 1594.69334 81616.66 0.45398 0.00024178 -0.22739 -0.0001211 0.22658 0.00012067 532.905975044043 538.579218840456 23.451 0.45699 23.451 23.291 23.748 -1.9073E-06 96 19 8 0 0 0 0.0075661 1 9436 45.825 40.747 1 3.2448 3.7603 0 34927000 7841300 27086000 29856 102 11310 11617 46591 46591 90 RPAEGPPTNPPAPGGGSSSSK 21 1 1 Unmodified _RPAEGPPTNPPAPGGGSSSSK_ 0 0 1 A0A087WZ13;E9PAU2 A0A087WZ13 A0A087WZ13 RAVER1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.3557 3 649.988815 1946.94462 77089.38 0.24832 0.0001614 0.88348 0.00057425 1.1318 0.00073565 650.323472144855 655.996672017522 23.244 0.33363 23.244 23.08 23.414 0 37 15 4 0 0 0 0.039913 1 9253 16.716 16.716 1 1.5848 1.7903 0 5847400 1735400 4112000 29857 438 11311 11618 46592 46592 RPAGGPQNQFPFQFGR 16 0 2 Unmodified _RPAGGPQNQFPFQFGR_ 0 0 1 A0A0S2Q0B1;O14497;H0Y488;A0A1B0GTU5;A0A087WUV6;Q96TA9;Q4LE49 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.2765 3 601.972771 1802.89648 81131.32 0.60241 0.00036264 -0.67027 -0.00040349 -0.067863 -4.0851E-05 601.972031611964 608.645147148723 94.314 0.47428 94.314 94.069 94.544 0 76 28 4 0 0 0 0.034208 2 52794 13.063 13.063 1 1.1747 1.0747 0 1751500 650550 1101000 29858 544 11312 11619 46593;46594 46593 RPAGGPQNQFPFQFGR 16 0 2 Unmodified _RPAGGPQNQFPFQFGR_ 0 0 1 A0A0S2Q0B1;O14497;H0Y488;A0A1B0GTU5;A0A087WUV6;Q96TA9;Q4LE49 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.9811 3 601.972771 1802.89648 NaN NaN NaN -0.11117 -6.6922E-05 NaN NaN NaN NaN 94.148 0.41142 94.148 93.907 94.318 0 0 0 0 0.036185 1 51811 26.393 21.925 1 NaN NaN 0 800390 0 800390 29859 544 11312 11619 46595 46595 RPANQFVPR 9 0 2 Unmodified _RPANQFVPR_ 0 0 1 N0E4C7;Q5SRQ6;P67870 N0E4C7 N0E4C7 CSNK2B Casein kinase II subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 368.8772 3 362.205197 1083.59376 99391.59 0.18489 6.6967E-05 -0.098408 -3.5644E-05 0.086479 3.1323E-05 362.539525347204 368.877172961787 25.004 0.27139 25.004 24.916 25.187 1.9073E-06 41 13 5 0 0 0 0.0027174 1 10717 49.715 35.508 1 1.2701 1.3728 0 20283000 6227300 14056000 29860 1358 11313 11620 46596 46596 RPANQFVPR 9 0 2 Unmodified _RPANQFVPR_ 0 0 1 N0E4C7;Q5SRQ6;P67870 N0E4C7 N0E4C7 CSNK2B Casein kinase II subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 362.2051 3 362.205197 1083.59376 99538.32 -0.018464 -6.6876E-06 0.1401 5.0745E-05 0.12164 4.4058E-05 362.20512192969 368.877353108722 24.501 0.34662 24.501 24.308 24.655 0 74 16 6 0 0 0 0.00041309 1 10279 69.812 55.145 1 0.92893 1.0354 0 25180000 13293000 11887000 29861 1358 11313 11620 46597 46597 RPASVSSSAAVEHEQR 16 0 2 Unmodified _RPASVSSSAAVEHEQR_ 0 0 1 Q7Z5L9 Q7Z5L9 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.6286 3 570.955446 1709.84451 NaN NaN NaN NaN NaN NaN NaN NaN NaN 16.963 1 16.963 16.463 17.463 0 0 0 0 0.019961 1 3999 39.338 34.87 1 29862 1880 11314 11621 46598 46598 RPAVVYIGSAGK 12 1 1 Unmodified _RPAVVYIGSAGK_ 0 0 1 B3KY11;A0A024R0Z3;Q9BUQ8 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3646 2 609.35368 1216.69281 77315.91 0.57507 0.00035042 0.47331 0.00028842 1.0484 0.00063884 609.354147086608 618.365078889797 36.668 0.33917 36.668 36.501 36.841 0 74 23 4 0 0 0 0.00035866 2 18840 81.625 52.538 1 0.85226 0.96558 0 16648000 9093600 7554100 29863 63 11315 11622 46599;46600 46599 RPCTIQVPEPILR 13 0 2 Unmodified _RPCTIQVPEPILR_ 0 0 1 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.9648 3 526.964337 1577.87118 NaN NaN NaN -0.38554 -0.00020317 NaN NaN NaN NaN 82.817 0.37081 82.817 82.564 82.935 0 0 0 0 0.034494 1 49436 30.133 10.295 1 NaN NaN 0 5953800 5953800 0 29864 122 11316 11623 46601 46601 RPCTIQVPEPILR 13 0 2 Unmodified _RPCTIQVPEPILR_ 0 0 1 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.6367 3 526.964337 1577.87118 85182.77 0.67495 0.00035567 -0.21442 -0.00011299 0.46053 0.00024268 527.298585976098 533.636367923317 81.074 0.50561 81.074 80.792 81.297 0 130 42 4 0 0 0 0.012476 2 49492 31.389 31.389 1 1.2231 1.2331 0 10202000 4661000 5541400 29865 122 11316 11623 46602;46603 46603 RPCTIQVPEPILR 13 0 2 Unmodified _RPCTIQVPEPILR_ 0 0 1 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.9647 3 526.964337 1577.87118 83632.45 0.46716 0.00024618 -0.34022 -0.00017928 0.12694 6.6894E-05 526.964259403034 533.636434393951 94.156 0.47324 94.156 93.934 94.408 0 124 28 7 0 0 0 0.047353 1 52656 17.069 17.069 1 1.5176 1.3867 0 2030100 574730 1455300 29866 122 11316 11623 46604 46604 RPDVSVQGDEVTLYTPEER 19 0 2 Unmodified _RPDVSVQGDEVTLYTPEER_ 0 0 1 B4DXG8;A5PLM5;Q06265;D6RIY6;D6RA17 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.0292 3 730.693957 2189.06004 NaN NaN NaN 0.55121 0.00040277 NaN NaN NaN NaN 75.989 0.56616 75.989 75.791 76.357 0 0 0 0 6.2674E-10 2 44837 62.792 53.85 1 NaN NaN 0 9062900 9062900 0 29867 675 11317 11624 46605;46606 46606 RPDVSVQGDEVTLYTPEER 19 0 2 Unmodified _RPDVSVQGDEVTLYTPEER_ 0 0 1 B4DXG8;A5PLM5;Q06265;D6RIY6;D6RA17 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.693 3 730.693957 2189.06004 72078.87 0.5594 0.00040875 -0.1032 -7.5408E-05 0.4562 0.00033334 731.028593542481 737.365852604586 74.762 0.55571 74.762 74.483 75.039 0 160 49 5 0 0 0 9.0867E-09 2 45122 74.364 74.364 1 0.75888 0.83999 0 22903000 13547000 9356200 29868 675 11317 11624 46607;46608 46608 RPDVSVQGDEVTLYTPEER 19 0 2 Unmodified _RPDVSVQGDEVTLYTPEER_ 0 0 1 B4DXG8;A5PLM5;Q06265;D6RIY6;D6RA17 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.3656 3 730.693957 2189.06004 70759.3 0.56321 0.00041153 0.0043955 3.2118E-06 0.5676 0.00041474 731.363180065162 737.365856423288 86.823 0.61366 86.823 86.517 87.131 0 122 35 5 0 0 0 0.00016011 2 47634 37.112 35.615 1 1.1441 1.0251 0 3550600 1572000 1978700 29869 675 11317 11624 46609;46610 46609 RPDVSVQGDEVTLYTPEER 19 0 2 Unmodified _RPDVSVQGDEVTLYTPEER_ 0 0 1 B4DXG8;A5PLM5;Q06265;D6RIY6;D6RA17 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.6995 3 730.693957 2189.06004 71037.99 0.62276 0.00045505 0.032048 2.3417E-05 0.65481 0.00047847 731.362909155876 737.366010249719 86.841 0.52064 86.841 86.619 87.14 7.6294E-06 147 33 6 0 0 0 0.0020061 2 46846 28.505 28.505 1 0.86082 0.77818 0 3132700 1737900 1394800 29870 675 11317 11624 46611;46612 46611 RPDVVENQPDAASQLNVDASGNLAK 25 1 1 Unmodified _RPDVVENQPDAASQLNVDASGNLAK_ 0 0 1 A8K7A4;A0A140VJP2;Q9NZL9;H7C0X7 A8K7A4 A8K7A4 MAT2B Methionine adenosyltransferase 2 subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.4473 3 870.103567 2607.28887 NaN NaN NaN 0.18066 0.00015719 NaN NaN NaN NaN 71.767 0.43553 71.767 71.596 72.031 0 0 0 0 0.00087073 1 41958 37.09 33.992 1 NaN NaN 0 9985000 0 9985000 29871 605 11318 11625 46613 46613 RPEIPTEQSR 10 0 2 Unmodified _RPEIPTEQSR_ 0 0 1 Q8N766;H7C4E3 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8286 2 606.820201 1211.62585 78093.98 0.15929 9.6658E-05 0.32624 0.00019797 0.48552 0.00029463 606.821089696962 616.828529626754 22.266 0.32853 22.266 22.084 22.412 0 55 14 6 0 0 0 0.018438 1 8270 52.579 14.275 1 1.0787 1.189 0 21622000 11646000 9975800 29872 1913 11319 11626 46614 46614 RPEIVVATPGR 11 0 2 Unmodified _RPEIVVATPGR_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03;A0A087WXU8;Q7Z4X3;Q7Z4W0 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.8513 2 597.851304 1193.68806 79037.58 0.58841 0.00035178 -0.012098 -7.2328E-06 0.57632 0.00034455 597.851182433389 607.859702658921 39.104 0.42196 39.104 38.919 39.341 0 150 35 6 0 0 0 0.033423 1 20594 44.024 30.204 1 0.76147 0.86784 0 40439000 21954000 18485000 29873 993 11320 11627 46615 46615 RPELEDSTLR 10 0 2 Unmodified _RPELEDSTLR_ 0 0 1 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3286 2 608.320034 1214.62551 NaN NaN NaN -0.20494 -0.00012467 NaN NaN NaN NaN 29.086 0.15598 29.086 29.032 29.188 -1.9073E-06 0 0 0 0.0024442 1 13991 80.706 46.5 1 NaN NaN 0 6005900 0 6005900 29874 1754 11321 11628 46616 46616 RPELLTHSTTEVTQPR 16 0 2 Unmodified _RPELLTHSTTEVTQPR_ 0 0 1 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.0081 3 622.334035 1863.98027 76321.73 0.55624 0.00034617 0.0077171 4.8026E-06 0.56396 0.00035097 622.334193493037 629.006241672398 36.741 0.50005 36.741 36.472 36.972 0 116 36 5 0 0 0 0.0024366 1 18848 30.974 30.974 1 0.7359 0.79135 0 16257000 10510000 5746300 29875 789 11322 11629 46617 46617 RPELLTHSTTEVTQPR 16 0 2 Unmodified _RPELLTHSTTEVTQPR_ 0 0 1 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.6684 3 622.334035 1863.98027 77163.58 0.52235 0.00032508 -0.2367 -0.00014731 0.28565 0.00017777 622.333545642762 629.006282785282 43.632 0.38342 43.632 43.453 43.837 0 116 26 6 0 0 0 0.045149 1 20591 14.276 14.276 1 1.0634 0.9714 0 2080200 1023100 1057100 29876 789 11322 11629 46618 46618 RPELNQPAR 9 0 2 Unmodified _RPELNQPAR_ 0 0 1 Q9NUL7 Q9NUL7 Q9NUL7 DDX28 Probable ATP-dependent RNA helicase DDX28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 360.8683 3 360.868473 1079.58359 106040.6 -0.13116 -4.7332E-05 0.2358 8.5091E-05 0.10463 3.7759E-05 360.86836344992 367.540682240333 17.643 0.24913 17.643 17.486 17.735 0 18 9 4 0 0 0 0.011258 1 4547 33.19 25.541 1 0.78106 0.76093 0 1393800 747150 646670 29877 2072 11323 11630 46619 46619 RPFDPNDR 8 0 2 Unmodified _RPFDPNDR_ 0 0 1 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;F8WEA1;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.75 2 508.749047 1015.48354 82443.27 0.33995 0.00017295 -0.13479 -6.8574E-05 0.20516 0.00010437 508.748924492889 518.75720374262 19.172 0.57926 19.172 18.892 19.471 0 186 37 9 0 0 0 0.016746 2 5793 73.248 52.966 1 1.1103 1.2124 0 198720000 95157000 103560000 29878 1772;1918 11324 11631 46620;46621 46621 RPFDPNDR 8 0 2 Unmodified _RPFDPNDR_ 0 0 1 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;F8WEA1;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 346.174 3 339.50179 1015.48354 100804.7 -0.074112 -2.5161E-05 -0.10462 -3.5517E-05 -0.17873 -6.0679E-05 339.501640236877 346.17396636425 19.196 0.33431 19.196 18.994 19.329 0 63 21 5 0 0 0 0.0076607 2 5859 47.198 39.552 1 0.98066 1.0833 0 11282000 5384300 5897300 29879 1772;1918 11324 11631 46622;46623 46622 RPFDPNDR 8 0 2 Unmodified _RPFDPNDR_ 0 0 1 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;F8WEA1;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.7493 2 508.749047 1015.48354 86163.22 0.082771 4.2109E-05 0.38286 0.00019478 0.46563 0.00023689 508.749203558625 518.757609878274 19.149 0.21453 19.149 19.037 19.252 0 34 8 7 0 0 0 0.00015527 1 5605 137.06 137.06 1 1.2158 1.3908 0 46778000 22095000 24683000 29880 1772;1918 11324 11631 46624 46624 RPFDPNDR 8 0 2 Unmodified _RPFDPNDR_ 0 0 1 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;F8WEA1;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.7573 2 508.749047 1015.48354 82880.69 -0.1149 -5.8458E-05 0.2107 0.00010719 0.095797 4.8737E-05 508.749093367587 518.757428917719 20.15 0.55675 20.15 19.924 20.481 0 101 21 9 0 0 0 0.046327 1 5642 53.756 37.554 1 0.88204 0.72462 0 29036000 15329000 13707000 29881 1772;1918 11324 11631 46625 46625 RPFVAINYAAIR 12 0 2 Unmodified _RPFVAINYAAIR_ 0 0 1 E7EQY4;E7EV10;Q9BTC8;D6W5A2;Q53QZ9 E7EQY4 E7EQY4 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.7885 3 464.269978 1389.7881 89431.64 0.44894 0.00020843 -0.032099 -1.4903E-05 0.41685 0.00019353 464.270013478062 470.942183072479 79.964 0.61772 79.964 79.533 80.15 0 135 47 5 0 0 0 0.018258 1 48549 34.96 34.96 1 0.67647 0.70168 0 12855000 8752100 4103300 29882 1221 11325 11632 46626 46626 RPFVAINYAAIR 12 0 2 Unmodified _RPFVAINYAAIR_ 0 0 1 E7EQY4;E7EV10;Q9BTC8;D6W5A2;Q53QZ9 E7EQY4 E7EQY4 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.9419 3 464.269978 1389.7881 NaN NaN NaN -0.064769 -3.007E-05 NaN NaN NaN NaN 92.749 0.37013 92.749 92.548 92.918 7.6294E-06 0 0 0 0.0059292 1 51714 50.354 35.667 1 NaN NaN 0 1561900 0 1561900 29883 1221 11325 11632 46627 46627 RPFVAINYAAIR 12 0 2 Unmodified _RPFVAINYAAIR_ 0 0 1 E7EQY4;E7EV10;Q9BTC8;D6W5A2;Q53QZ9 E7EQY4 E7EQY4 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 470.9418 3 464.269978 1389.7881 90583.8 0.053483 2.4831E-05 -0.30402 -0.00014115 -0.25053 -0.00011632 464.269815081043 470.941918306586 92.36 0.45624 92.36 92.15 92.606 7.6294E-06 81 21 6 0 0 0 0.010137 1 50617 24.352 24.352 1 1.7016 1.5144 0 1781300 608740 1172600 29884 1221 11325 11632 46628 46628 RPGAVATGDIGR 12 0 2 Unmodified _RPGAVATGDIGR_ 0 0 1 H0Y9G6;E7ETU7;B4DKM0;P09001;D6RC14;B4DW56 H0Y9G6 H0Y9G6 MRPL3 39S ribosomal protein L3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 390.5509 3 390.551033 1168.63127 95500.85 -0.014969 -5.846E-06 -0.0066831 -2.6101E-06 -0.021652 -8.4561E-06 390.550921724187 397.223343886729 23.178 0.32194 23.178 23.014 23.336 0 64 15 6 0 0 0 0.00046247 1 9094 46.159 39.46 1 1.2735 1.3885 0 13750000 5537100 8212800 29885 992 11326 11633 46629 46629 RPGAVATGDIGR 12 0 2 Unmodified _RPGAVATGDIGR_ 0 0 1 H0Y9G6;E7ETU7;B4DKM0;P09001;D6RC14;B4DW56 H0Y9G6 H0Y9G6 MRPL3 39S ribosomal protein L3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.223 3 390.551033 1168.63127 94843.36 0.12599 4.9206E-05 -0.24509 -9.5721E-05 -0.1191 -4.6515E-05 390.550853389188 397.223195050993 22.738 0.43055 22.738 22.563 22.994 1.9073E-06 76 16 8 0 0 0 0.0014212 1 8757 39.73 29.12 1 1.2791 1.3321 0 13195000 7634600 5560200 29886 992 11326 11633 46630 46630 RPGAVATGDIGR 12 0 2 Unmodified _RPGAVATGDIGR_ 0 0 1 H0Y9G6;E7ETU7;B4DKM0;P09001;D6RC14;B4DW56 H0Y9G6 H0Y9G6 MRPL3 39S ribosomal protein L3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 397.223 3 390.551033 1168.63127 96360.38 0.10886 4.2515E-05 -0.27537 -0.00010755 -0.16651 -6.5032E-05 390.550887465568 397.223111813574 25.307 0.29844 25.307 25.176 25.474 0 36 13 4 0 0 0 0.023841 1 9221 17.694 15.715 1 1.778 1.6252 0 959080 312290 646780 29887 992 11326 11633 46631 46631 RPGEEGTVMSLAGK 14 1 1 Oxidation (M) _RPGEEGTVM(ox)SLAGK_ RPGEEGTVM(1)SLAGK RPGEEGTVM(88.19)SLAGK 0 1 1 O96008;K7EKG4 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.376 2 724.364115 1446.71368 70242.13 0.64344 0.00046608 0.19026 0.00013782 0.8337 0.0006039 724.364187894055 733.375446484661 27.942 0.46649 27.942 27.779 28.245 -1.9073E-06 99 31 9 0 0 0 0.00018951 2 13005 88.187 59.46 1 2.0061 2.3866 0 46583000 16058000 30525000 29888 1433 11327 11634 46632;46633 46632 1126 RPGEEGTVMSLAGK 14 1 1 Oxidation (M) _RPGEEGTVM(ox)SLAGK_ RPGEEGTVM(1)SLAGK RPGEEGTVM(68.17)SLAGK 0 1 1 O96008;K7EKG4 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.2526 3 483.245169 1446.71368 NaN NaN NaN 0.063857 3.0859E-05 NaN NaN NaN NaN 27.922 0.2563 27.922 27.779 28.035 0 0 0 0 0.00025135 1 13043 68.168 60.302 1 NaN NaN 0 23771000 0 23771000 29889 1433 11327 11634 46634 46634 1126 RPGEEGTVMSLAGK 14 1 1 Oxidation (M) _RPGEEGTVM(ox)SLAGK_ RPGEEGTVM(1)SLAGK RPGEEGTVM(96.82)SLAGK 0 1 1 O96008;K7EKG4 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.3756 2 724.364115 1446.71368 70839.65 0.47518 0.00034421 0.16016 0.00011602 0.63534 0.00046022 724.364253739679 733.375464897052 27.292 0.37371 27.292 27.087 27.461 0 95 19 7 0 0 0 5.8858E-05 2 12495 96.82 74.827 1 2.0557 2.4001 0 47540000 12286000 35254000 29890 1433 11327 11634 46635;46636 46635 1126 RPGEEGTVMSLAGK 14 1 1 Oxidation (M) _RPGEEGTVM(ox)SLAGK_ RPGEEGTVM(1)SLAGK RPGEEGTVM(87.08)SLAGK 0 1 1 O96008;K7EKG4 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.253 3 483.245169 1446.71368 85281.33 0.15468 7.4748E-05 0.099099 4.7889E-05 0.25378 0.00012264 483.245732829964 489.25267085586 27.316 0.35321 27.316 27.087 27.441 0 95 18 6 0 0 0 3.0532E-05 1 12505 87.083 78.57 1 2.1046 2.4617 0 51358000 13730000 37627000 29891 1433 11327 11634 46637 46637 1126 RPGVYTQVTK 10 1 1 Unmodified _RPGVYTQVTK_ 0 0 1 Q14520 Q14520 Q14520 HABP2 Hyaluronan-binding protein 2;Hyaluronan-binding protein 2 50 kDa heavy chain;Hyaluronan-binding protein 2 50 kDa heavy chain alternate form;Hyaluronan-binding protein 2 27 kDa light chain;Hyaluronan-binding protein 2 27 kDa light chain alternate form ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.8247 2 574.824755 1147.63496 NaN NaN NaN -0.15652 -8.9974E-05 NaN NaN NaN NaN 21.815 0.34198 21.815 21.679 22.021 0 0 0 0 7.9729E-16 1 7863 138.98 95.167 1 NaN NaN 0 37483000 37483000 0 29892 1733 11328 11635 46638 46638 RPIVEFSLEDR 11 0 2 Unmodified _RPIVEFSLEDR_ 0 0 1 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.9177 3 454.245498 1359.71466 90388.18 0.085375 3.8781E-05 0.37702 0.00017126 0.46239 0.00021004 454.245865837857 460.917651688187 75.19 0.60178 75.19 74.944 75.546 0 230 53 6 0 0 0 0.00021306 1 45310 62.924 62.924 1 0.92318 1.0125 0 20187000 9469600 10718000 29893 214 11329 11636 46639 46639 RPIVEFSLEDR 11 0 2 Unmodified _RPIVEFSLEDR_ 0 0 1 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.2518 3 454.245498 1359.71466 90898.73 0.15443 7.0149E-05 0.15576 7.0752E-05 0.31019 0.0001409 454.245616508886 460.917562022356 87.092 0.67165 87.092 86.741 87.413 -7.6294E-06 171 37 6 0 0 0 0.058939 1 47712 10.768 10.768 1 1.1818 1.0221 0 5048500 2516900 2531600 29894 214 11329 11636 46640 46640 RPIVEFSLEDR 11 0 2 Unmodified _RPIVEFSLEDR_ 0 0 1 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 460.9174 3 454.245498 1359.71466 90560.96 0.050135 2.2774E-05 0.40498 0.00018396 0.45512 0.00020674 454.24572877263 460.917740186222 87.021 0.71448 87.021 86.664 87.378 0 166 43 5 0 0 0 0.015339 1 46818 25.53 25.53 1 1.1167 1.0098 0 3401400 1308600 2092800 29895 214 11329 11636 46641 46641 RPLALQR 7 0 2 Unmodified _RPLALQR_ 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.2717 2 427.271961 852.52937 93509.26 -0.56323 -0.00024065 0.68035 0.0002907 0.11712 5.0043E-05 427.272099464174 437.280446136132 22.008 0.35816 22.008 21.875 22.233 0 62 19 4 0 0 0 0.024162 1 8168 100.07 20.613 1 0.65528 0.71228 0 43832000 23396000 20436000 29896 1389 11330 11637 46642 46642 RPLALQR 7 0 2 Unmodified _RPLALQR_ 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.272 2 427.271961 852.52937 93000.49 -0.18118 -7.7415E-05 0.44774 0.00019131 0.26656 0.00011389 427.272059939545 437.280270490035 21.591 0.40164 21.591 21.464 21.866 0 67 19 5 0 0 0 0.033034 1 7705 94.777 18.861 1 0.63765 0.73239 0 54747000 30521000 24226000 29897 1389 11330 11637 46643 46643 RPLLGLVLTPTR 12 0 2 Unmodified _RPLLGLVLTPTR_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03;A0A087WXU8 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.6261 3 445.953878 1334.8398 92495.1 0.29732 0.00013259 0.10132 4.5184E-05 0.39864 0.00017777 445.953826840254 452.626221696772 96.692 0.52856 96.692 96.535 97.063 0 83 44 4 0 0 0 0.00024617 2 58992 62.924 52.314 1 0.73369 0.80638 0 12181000 5442700 6738400 29898 993 11331 11638 46644;46645 46645 RPLLGLVLTPTR 12 0 2 Unmodified _RPLLGLVLTPTR_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03;A0A087WXU8 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 445.9537 3 445.953878 1334.8398 93710.81 0.34637 0.00015447 0.28172 0.00012563 0.62809 0.0002801 445.953967764328 452.960449859132 94.417 0.18633 94.417 94.283 94.47 0 29 15 4 0 0 0 0.004456 1 58705 41.242 39.803 1 1.2557 1.2591 0 9197600 6135500 3062100 29899 993 11331 11638 46646 46646 RPLLGLVLTPTR 12 0 2 Unmodified _RPLLGLVLTPTR_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03;A0A087WXU8 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 452.6259 3 445.953878 1334.8398 91548.25 0.23627 0.00010537 0.11366 5.0689E-05 0.34994 0.00015606 445.953918908469 452.626019380043 107.66 0.43073 107.66 107.44 107.87 7.6294E-06 99 24 7 0 0 0 0.0086123 2 61656 35.204 32.253 1 1.0679 0.91735 0 5401500 2564400 2837100 29900 993 11331 11638 46647;46648 46648 RPLLGLVLTPTR 12 0 2 Unmodified _RPLLGLVLTPTR_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;Q59FS7;B4DM03;A0A087WXU8 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 452.6256 3 445.953878 1334.8398 91643.49 0.12132 5.4104E-05 0.24691 0.00011011 0.36823 0.00016421 445.953975759862 452.626126462689 107.23 0.48592 107.23 107.03 107.52 -7.6294E-06 104 34 4 0 0 0 0.0077977 2 60518 35.737 32.786 1 1.0219 0.92514 0 4654200 2204900 2449200 29901 993 11331 11638 46649;46650 46650 RPLNIYGDVEMK 12 1 1 Oxidation (M) _RPLNIYGDVEM(ox)K_ RPLNIYGDVEM(1)K RPLNIYGDVEM(47.94)K 0 1 1 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61 A0A024R4W4 A0A024R4W4 BRD1 Bromodomain-containing protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.8439 2 725.871576 1449.7286 71436.93 0.65935 0.00047861 -1.9754 -0.0014339 -1.316 -0.00095525 726.36873648426 734.882544524667 46.968 0.11787 46.968 46.882 47 0 19 10 4 0 0 0 0.0060838 1 26027 47.938 37.651 1 NaN NaN 0 6718500 2655300 4063200 29902 162 11332 11639 46651 46651 135 RPNKPAELIAK 11 2 1 Unmodified _RPNKPAELIAK_ 0 0 2 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 412.9189 3 412.918945 1235.73501 93779.16 0.16398 6.7711E-05 -0.23993 -9.9071E-05 -0.075948 -3.136E-05 412.9188054019 421.597705913761 23.506 0.2486 23.506 23.373 23.622 0 63 11 8 0 0 0 0.00155 2 9345 66.267 66.267 1 0.79608 0.9502 0 20638000 11124000 9513700 29903 1718 11333 11640 46652;46653 46652 RPNNLVIGR 9 0 2 Unmodified _RPNNLVIGR_ 0 0 1 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.8121 2 519.811982 1037.60941 82840.91 0.37357 0.00019419 -0.1166 -6.0611E-05 0.25697 0.00013357 519.811823951189 529.820224199248 27.828 0.33263 27.828 27.657 27.99 0 99 20 7 0 0 0 0.018411 1 12891 58.782 32.18 1 0.94856 1.0335 0 95457000 51705000 43753000 29904 773 11334 11641 46654 46654 RPNNLVIGR 9 0 2 Unmodified _RPNNLVIGR_ 0 0 1 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.3135 2 519.811982 1037.60941 83562.84 0.70297 0.00036541 0.072153 3.7506E-05 0.77512 0.00040292 519.811912493201 529.820199879076 26.954 0.36347 26.954 26.804 27.167 0 75 16 7 0 0 0 1.9371E-05 1 12270 125.5 70.893 1 0.84583 0.98586 0 97037000 51523000 45514000 29905 773 11334 11641 46655 46655 RPPEDDFR 8 0 2 Unmodified _RPPEDDFR_ 0 0 1 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.2574 2 516.24888 1030.48321 85596.73 0.28905 0.00014922 0.41919 0.00021641 0.70824 0.00036563 516.248761432603 526.257515832367 21.252 0.71269 21.252 20.829 21.541 0 107 33 4 0 0 0 0.020394 1 7362 68.224 33.416 1 1.0942 1.1051 0 10558000 4951500 5606600 29906 1122 11335 11642 46656 46656 RPPILECLEK 10 1 1 Unmodified _RPPILECLEK_ 0 0 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.848 2 627.847373 1253.68019 NaN NaN NaN 0.25569 0.00016053 NaN NaN NaN NaN 58.234 0.20771 58.234 58.105 58.312 0 0 0 0 0.0049544 1 33819 70.977 39.106 1 NaN NaN 0 19575000 19575000 0 29907 1991 11336 11643 46657 46657 RPPILECLEK 10 1 1 Unmodified _RPPILECLEK_ 0 0 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8586 2 627.847373 1253.68019 78657.85 0.58469 0.00036709 -0.23861 -0.00014981 0.34608 0.00021728 627.847521088056 636.858590106995 69.475 0.34081 69.475 69.299 69.64 0 101 22 7 0 0 0 0.039562 1 35630 45.368 45.368 1 1.037 0.89366 0 2379400 1342000 1037400 29908 1991 11336 11643 46658 46658 RPPNSVVTQHEPAGQNEK 18 1 1 Unmodified _RPPNSVVTQHEPAGQNEK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.337 3 663.336327 1986.98715 74574.22 0.39658 0.00026307 -0.0084132 -5.5808E-06 0.38817 0.00025749 663.33611715322 669.678279100922 19.059 0.37234 19.059 18.866 19.238 0 147 27 7 0 0 0 1.5086E-08 2 5786 93.812 82.17 1 0.68267 0.7936 0 30168000 16961000 13207000 29909 895 11337 11644 46659;46660 46659 RPPNSVVTQHEPAGQNEK 18 1 1 Unmodified _RPPNSVVTQHEPAGQNEK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.6717 3 663.336327 1986.98715 74358.4 0.58985 0.00039127 -0.15597 -0.00010346 0.43388 0.00028781 663.336093660968 669.343697922631 18.661 0.44438 18.661 18.481 18.926 0 155 29 8 0 0 0 2.1007E-12 2 5264 106.31 94.766 1 0.83651 0.95857 0 23186000 11382000 11804000 29910 895 11337 11644 46661;46662 46662 RPPNSVVTQHEPAGQNEK 18 1 1 Unmodified _RPPNSVVTQHEPAGQNEK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 994.4998 2 994.500852 1986.98715 NaN NaN NaN -0.69994 -0.00069609 NaN NaN NaN NaN 18.646 0.20905 18.646 18.551 18.76 0 0 0 0 0.042245 1 5300 31.389 18.253 1 NaN NaN 0 3869400 3869400 0 29911 895 11337 11644 46663 46663 RPPNSVVTQHEPAGQNEK 18 1 1 Unmodified _RPPNSVVTQHEPAGQNEK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.671 3 663.336327 1986.98715 73989.44 0.09455 6.2719E-05 0.29293 0.00019431 0.38748 0.00025703 663.670835096155 669.344072386265 20.209 0.41533 20.209 20.027 20.442 1.9073E-06 106 14 11 0 0 0 0.00013655 2 5647 43.81 39.767 1 1.2931 1.1228 0 17779000 7702400 10076000 29912 895 11337 11644 46664;46665 46664 RPPNSVVTQHEPAGQNEK 18 1 1 Unmodified _RPPNSVVTQHEPAGQNEK_ 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.3373 3 663.336327 1986.98715 73494.52 0.087668 5.8153E-05 0.67261 0.00044617 0.76028 0.00050432 663.671090111233 669.344248670657 20.021 0.54851 20.021 19.821 20.37 0 110 21 11 0 0 0 0.00048576 1 5012 36.207 30.912 1 1.3167 1.116 0 16335000 7236500 9098800 29913 895 11337 11644 46666 46666 RPPPEHFR 8 0 2 Unmodified _RPPPEHFR_ 0 0 1 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 345.8541 3 345.854276 1034.541 102462.7 -4.4841E-05 -1.5508E-08 -0.26033 -9.0036E-05 -0.26037 -9.0051E-05 345.85403672603 352.526313637809 16.794 0.44361 16.794 16.604 17.047 0 52 15 6 0 0 0 0.0049559 1 4043 52.482 41.26 1 1.191 1.3457 0 4718000 2361600 2356500 29914 1122 11338 11645 46667 46667 RPPVLR 6 0 2 Unmodified _RPPVLR_ 0 0 1 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 369.2432 2 369.242673 736.470792 96595.17 -0.16864 -6.227E-05 0.24344 8.9889E-05 0.074798 2.7619E-05 369.242758057253 379.250980467116 19.876 0.80643 19.876 19.752 20.559 0 123 29 9 0 0 0 0.0050737 1 6341 145 27.464 1 0.88939 0.97513 0 766380000 402730000 363650000 29915 1648 11339 11646 46668 46668 RPPVLR 6 0 2 Unmodified _RPPVLR_ 0 0 1 P62424;Q5T8U3;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 369.2427 2 369.242673 736.470792 96607.23 -0.31738 -0.00011719 0.12605 4.6541E-05 -0.19134 -7.065E-05 369.24274554486 379.250941400404 19.35 1.2815 19.35 19.135 20.417 0 194 51 9 0 0 0 0.0050737 1 5761 145 27.464 1 0.80828 0.99394 0 784680000 435350000 349330000 29916 1648 11339 11646 46669 46669 RPQGESYDQAIR 12 0 2 Unmodified _RPQGESYDQAIR_ 0 0 1 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3604 2 710.352397 1418.69024 72889.47 0.77924 0.00055354 0.2354 0.00016722 1.0146 0.00072076 710.352423596548 720.360675491077 23.841 0.26379 23.841 23.75 24.014 0 38 13 4 0 0 0 0.0014899 1 9671 64.297 45.517 1 0.99375 1.1048 0 9404300 5335100 4069200 29917 1870 11340 11647 46670 46670 RPQGESYDQAIR 12 0 2 Unmodified _RPQGESYDQAIR_ 0 0 1 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.3616 2 710.352397 1418.69024 71759.23 0.44081 0.00031313 0.41521 0.00029495 0.85603 0.00060808 710.352783635768 720.360963341162 23.402 0.28721 23.402 23.202 23.489 0 40 13 5 0 0 0 0.052625 1 9233 36.334 21.183 1 1.3913 1.3681 0 5245700 2043700 3201900 29918 1870 11340 11647 46671 46671 RPQYSNPPVQGEVMEGADNQGAGEQGR 27 0 2 Oxidation (M) _RPQYSNPPVQGEVM(ox)EGADNQGAGEQGR_ RPQYSNPPVQGEVM(1)EGADNQGAGEQGR RPQYSNPPVQGEVM(57.74)EGADNQGAGEQGR 0 1 1 P67809;Q6PKI6;Q7KZ24;H0Y449;A0JLU4;C9J5V9;Q2VIK8 P67809 P67809 YBX1 Nuclease-sensitive element-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.4463 3 963.105642 2886.2951 NaN NaN NaN -0.24918 -0.00023999 NaN NaN NaN NaN 37.902 0.43312 37.902 37.671 38.104 0 0 0 0 4.4356E-11 1 19695 57.738 51.304 1 NaN NaN 0 7817900 0 7817900 29919 1657 11341 11648 46672 46672 1436 RPSLGLAPGGLAVVGR 16 0 2 Unmodified _RPSLGLAPGGLAVVGR_ 0 0 1 B3KR89;B9EGQ5;M0QXA7;O95785 B3KR89 B3KR89 WIZ Protein Wiz MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.8029 3 507.307091 1518.89945 86489.58 0.51048 0.00025897 -0.18899 -9.5878E-05 0.32149 0.00016309 507.641252912463 513.979135807103 98.803 0.48031 98.803 98.581 99.061 0 117 29 7 0 0 0 0.04431 1 55759 19.39 19.39 1 1.0613 0.96356 0 2784100 1266200 1517900 29920 932 11342 11649 46673 46673 RPSLGLAPGGLAVVGR 16 0 2 Unmodified _RPSLGLAPGGLAVVGR_ 0 0 1 B3KR89;B9EGQ5;M0QXA7;O95785 B3KR89 B3KR89 WIZ Protein Wiz MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.8028 3 507.307091 1518.89945 86291.73 0.48675 0.00024693 0.093251 4.7307E-05 0.58 0.00029424 507.641322257021 513.979381110057 98.488 0.45019 98.488 98.289 98.739 0 102 27 5 0 0 0 0.047675 1 54795 18.58 18.173 1 1.0773 0.97376 0 3072700 1518500 1554200 29921 932 11342 11649 46674 46674 RPSQSIASETLTK 13 1 1 Unmodified _RPSQSIASETLTK_ 0 0 1 A0A1B0GUH9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.3978 2 709.385905 1416.75726 71784.14 0.71419 0.00050664 0.81518 0.00057828 1.5294 0.0010849 709.887363246512 718.397288749201 28.99 0.41764 28.99 28.669 29.086 0 60 21 6 0 0 0 1.2278E-05 3 13837 103.44 39.142 1 1.1335 1.3392 0 37744000 16330000 21414000 29922 630 11343 11650 46675;46676;46677 46675 RPSQSIASETLTK 13 1 1 Unmodified _RPSQSIASETLTK_ 0 0 1 A0A1B0GUH9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.3861 2 709.385905 1416.75726 NaN NaN NaN 0.097236 6.8978E-05 NaN NaN NaN NaN 28.111 0.17747 28.111 27.995 28.172 0 0 0 0 8.7416E-09 1 13303 107.03 27.041 1 NaN NaN 0 7954800 7954800 0 29923 630 11343 11650 46678 46678 RPSQSIASETLTK 13 1 1 Unmodified _RPSQSIASETLTK_ 0 0 1 A0A1B0GUH9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.3972 2 709.385905 1416.75726 NaN NaN NaN 0.60723 0.00043076 NaN NaN NaN NaN 32.788 0.29638 32.788 32.64 32.936 0 0 0 0 0.0026607 1 14212 68.536 26.535 1 NaN NaN 0 5061300 0 5061300 29924 630 11343 11650 46679 46679 RPSSLQSLFGLPEAAGAR 18 0 2 Unmodified _RPSSLQSLFGLPEAAGAR_ 0 0 1 P39880 P39880 P39880 CUX1 Homeobox protein cut-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.6776 3 619.670758 1855.99044 82054.17 0.6583 0.00040793 -0.41129 -0.00025486 0.24701 0.00015306 619.670398424033 626.342781442017 114.86 0.31439 114.86 114.74 115.05 -7.6294E-06 32 14 3 0 0 0 0.024769 1 66306 18.058 18.058 1 1.9843 1.7692 0 1555900 470340 1085600 29925 1556 11344 11651 46680 46680 RPSTSEVNNVNPK 13 1 1 Unmodified _RPSTSEVNNVNPK_ 0 0 1 A8K124;B4DHL1;A0A024R5W1;Q6N043;H0YLA6;H0YL38;Q9H740 A8K124 A8K124 SUHW4;ZNF280D Zinc finger protein 280D ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3861 2 721.373329 1440.73211 NaN NaN NaN 0.30006 0.00021645 NaN NaN NaN NaN 19.116 0.11327 19.116 19.051 19.164 0 0 0 0 0.039132 1 5613 41.54 27.77 1 NaN NaN 0 2071500 0 2071500 29926 189 11345 11652 46681 46681 RPTCVIMVK 9 1 1 Oxidation (M) _RPTCVIM(ox)VK_ RPTCVIM(1)VK RPTCVIM(61.16)VK 0 1 1 Q9NX24 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.3154 2 560.304287 1118.59402 78000.13 1.0209 0.000572 -0.97624 -0.00054699 0.044639 2.5011E-05 560.303583610205 569.314998315686 28.588 0.30056 28.588 28.419 28.719 0 68 18 5 0 0 0 0.019277 2 13529 61.161 32.435 1 1.042 1.2472 0 56110000 23689000 32421000 29927 2077 11346 11653 46682;46683 46683 1910 RPTCVIMVK 9 1 1 Oxidation (M) _RPTCVIM(ox)VK_ RPTCVIM(1)VK RPTCVIM(46.46)VK 0 1 1 Q9NX24 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.3154 2 560.304287 1118.59402 79348.38 0.27338 0.00015318 0.2053 0.00011503 0.47868 0.00026821 560.304215417165 569.315289896654 27.658 0.33358 27.658 27.461 27.795 0 77 17 7 0 0 0 0.015035 1 12953 46.462 15.04 1 0.97769 1.1519 0 95848000 49625000 46223000 29928 2077 11346 11653 46684 46684 1910 RPTDYFAEMAK 11 1 1 Oxidation (M) _RPTDYFAEM(ox)AK_ RPTDYFAEM(1)AK RPTDYFAEM(67.21)AK 0 1 1 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.8167 2 672.81627 1343.61799 71079.39 0.478 0.00032161 0.12348 8.308E-05 0.60149 0.00040469 672.816604845743 681.827610145447 34.567 0.29182 34.567 34.43 34.721 3.8147E-06 125 22 7 0 0 0 0.0034052 2 17313 67.214 48.878 1 1.3978 1.6795 0 72771000 30310000 42461000 29929 1316 11347 11654 46685;46686 46686 997 RPTDYFAEMAK 11 1 1 Oxidation (M) _RPTDYFAEM(ox)AK_ RPTDYFAEM(1)AK RPTDYFAEM(70.94)AK 0 1 1 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.8269 2 672.81627 1343.61799 72386.71 0.44997 0.00030274 0.017922 1.2058E-05 0.46789 0.0003148 672.816237294054 681.82752065363 33.476 0.31408 33.476 33.29 33.604 -3.8147E-06 175 26 8 0 0 0 0.0022821 1 16711 70.942 54.271 1 1.308 1.5426 0 112400000 46995000 65407000 29930 1316 11347 11654 46687 46687 997 RPTDYFAEMAK 11 1 1 Unmodified _RPTDYFAEMAK_ 0 0 1 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.8248 2 664.818812 1327.62307 74286.96 0.46643 0.00031009 0.79104 0.0005259 1.2575 0.00083599 665.321424202409 673.830349198117 69.952 0.51165 69.952 69.64 70.151 0 114 40 5 0 0 0 0.020718 2 35893 47.894 47.894 1 1.1222 0.94045 0 6076100 2805000 3271000 29931 1316 11347 11655 46688;46689 46688 RPTPQDSPIFLPVDDTSFR 19 0 2 Unmodified _RPTPQDSPIFLPVDDTSFR_ 0 0 1 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.3724 3 730.039287 2187.09603 70107.62 0.49993 0.00036497 -0.22092 -0.00016128 0.27901 0.00020369 730.039267472694 736.711509222751 117.11 0.45207 117.11 116.84 117.29 -7.6294E-06 90 18 8 0 0 0 5.9583E-06 2 68894 49.188 49.188 1 0.69992 0.59659 0 7048500 4285100 2763500 29932 587 11348 11656 46690;46691 46690 RPTPQDSPIFLPVDDTSFR 19 0 2 Unmodified _RPTPQDSPIFLPVDDTSFR_ 0 0 1 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.04 3 730.039287 2187.09603 70663.92 0.74721 0.00054549 -0.10247 -7.4809E-05 0.64474 0.00047068 730.373085042611 736.711740054953 116.84 0.44731 116.84 116.62 117.07 0 101 19 8 0 0 0 4.8234E-06 2 67824 58.024 58.024 1 0.60092 0.54672 0 6800800 4322400 2478400 29933 587 11348 11656 46692;46693 46693 RPVDSYDIPK 10 1 1 Unmodified _RPVDSYDIPK_ 0 0 1 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;H0YDQ3 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.3253 2 595.31422 1188.61389 NaN NaN NaN -0.16278 -9.6902E-05 NaN NaN NaN NaN 36.246 0.36864 36.246 36.135 36.504 0 0 0 0 0.009486 1 18316 64.04 47.264 1 NaN NaN 0 9098500 0 9098500 29934 640 11349 11657 46694 46694 RPVFPPLCGDGLLSGK 16 1 1 Unmodified _RPVFPPLCGDGLLSGK_ 0 0 1 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.9857 3 571.643263 1711.90796 81525.2 0.8694 0.00049699 -0.56369 -0.00032223 0.30571 0.00017475 571.643096993717 577.650955179499 100.95 1.1407 100.95 100.4 101.54 0 361 85 6 0 0 0 9.3161E-05 3 62343 51.888 51.888 1 0.93641 1.1176 0 51330000 28529000 22801000 29935 858 11350 11658 46695;46696;46697 46697 RPVFPPLCGDGLLSGK 16 1 1 Unmodified _RPVFPPLCGDGLLSGK_ 0 0 1 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.6514 3 571.643263 1711.90796 78736.27 0.80819 0.000462 -0.30435 -0.00017398 0.50384 0.00028802 571.977345324036 577.650754829018 112.18 0.83541 112.18 111.91 112.74 7.6294E-06 235 47 8 0 0 0 0.038162 1 65006 16.123 16.123 1 1.2655 1.0434 0 5290900 2369600 2921300 29936 858 11350 11658 46698 46698 RPVFPPLCGDGLLSGK 16 1 1 Unmodified _RPVFPPLCGDGLLSGK_ 0 0 1 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.6428 3 571.643263 1711.90796 79693.63 0.51837 0.00029633 0.020164 1.1527E-05 0.53854 0.00030785 571.977668496484 577.650986278495 111.89 0.83385 111.89 111.53 112.36 0 234 47 8 0 0 0 0.00055185 2 63929 41.912 41.912 1 1.3096 1.1 0 4782400 2038900 2743500 29937 858 11350 11658 46699;46700 46700 RPVINAGDGVGEHPTQALLDIFTIR 25 0 2 Unmodified _RPVINAGDGVGEHPTQALLDIFTIR_ 0 0 1 Q53SY7;F8VPD4;P27708;H7C2E4 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.3674 4 673.115963 2688.43475 75724.85 0.79014 0.00053185 0.12265 8.2557E-05 0.91279 0.00061441 673.366864940049 678.371189936559 129.12 0.27148 129.12 128.97 129.24 -1.5259E-05 57 12 8 0 0 0 0.01823 1 78072 17.158 17.158 1 0.82618 0.75678 0 1330300 590160 740110 29938 1259 11351 11659 46701 46701 RPVSAMFIFSEEK 13 1 1 Oxidation (M) _RPVSAM(ox)FIFSEEK_ RPVSAM(1)FIFSEEK RPVSAM(90.65)FIFSEEK 0 1 1 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.4059 2 778.892509 1555.77046 66940.23 0.6142 0.0004784 0.021943 1.7091E-05 0.63615 0.00049549 778.892131906195 787.904155678769 70.13 1.0329 70.13 69.716 70.748 0 400 82 6 0 0 0 0.00028419 3 41918 90.653 90.653 1 1.0744 1.2623 0 61895000 29722000 32173000 29939 1244 11352 11660 46702;46703;46704 46703 952 RPVSAMFIFSEEK 13 1 1 Oxidation (M) _RPVSAM(ox)FIFSEEK_ RPVSAM(1)FIFSEEK RPVSAM(52.48)FIFSEEK 0 1 1 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.6052 3 519.597431 1555.77046 83645.43 0.35625 0.00018511 -0.0019886 -1.0333E-06 0.35426 0.00018407 519.931814505484 525.604897558398 70.171 0.95754 70.171 69.681 70.639 0 335 77 6 0 0 0 0.00094201 2 41989 52.484 47.307 1 0.97099 1.1373 0 54295000 25370000 28925000 29940 1244 11352 11660 46705;46706 46705 952 RPVSAMFIFSEEK 13 1 1 Unmodified _RPVSAMFIFSEEK_ 0 0 1 E9PKP7;P17480;A8K962;B4DNQ1;O00164;B4DLB0 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 779.9077 2 770.895051 1539.77555 69309.7 0.55717 0.00042952 0.38055 0.00029336 0.93772 0.00072288 770.894889259764 779.9068077075 101.3 0.52535 101.3 101.06 101.59 7.6294E-06 104 35 5 0 0 0 0.029147 1 57384 36.32 28.096 1 2.0411 1.7813 0 2456000 805460 1650600 29941 1244 11352 11661 46707 46707 RPWLSATPSSGASAAR 16 0 2 Unmodified _RPWLSATPSSGASAAR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.2846 3 538.949744 1613.8274 NaN NaN NaN 0.12183 6.5663E-05 NaN NaN NaN NaN 45.269 0.32588 45.269 45.093 45.419 0 0 0 0 0.017981 1 24363 30.536 23.166 1 NaN NaN 0 6484400 6484400 0 29942 2002 11353 11662 46708 46708 RPYAPINANAIK 12 1 1 Unmodified _RPYAPINANAIK_ 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.3896 2 664.377686 1326.74082 74029.43 0.87221 0.00057948 -0.18555 -0.00012328 0.68666 0.0004562 664.377453393335 673.388807473212 46.344 0.64311 46.344 46.103 46.746 0 254 54 8 0 0 0 0.0082534 1 24896 46.462 24.998 1 0.75358 0.90743 0 102470000 55323000 47147000 29943 168 11354 11663 46709 46709 RPYAPINANAIK 12 1 1 Unmodified _RPYAPINANAIK_ 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.2537 3 443.254216 1326.74082 90167.59 0.29974 0.00013286 -0.29167 -0.00012928 0.0080663 3.5754E-06 443.254122901809 449.261292755325 46.346 0.50906 46.346 46.065 46.574 0 184 42 7 0 0 0 0.0042845 2 24967 32.616 22.386 1 0.85275 1.004 0 34044000 18951000 15093000 29944 168 11354 11663 46710;46711 46711 RPYAPINANAIK 12 1 1 Unmodified _RPYAPINANAIK_ 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3799 2 664.377686 1326.74082 73928.41 0.86557 0.00057507 0.01249 8.2984E-06 0.87806 0.00058336 664.377591218061 673.388765976953 44.411 0.53735 44.411 44.14 44.677 0 257 46 8 0 0 0 0.00014241 2 24141 96.668 55.786 1 0.66836 0.78827 0 113420000 69311000 44113000 29945 168 11354 11663 46712;46713 46712 RPYAPINANAIK 12 1 1 Unmodified _RPYAPINANAIK_ 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.3898 2 664.377686 1326.74082 74647.85 0.48926 0.00032505 -0.14484 -9.6225E-05 0.34443 0.00022883 664.377735586006 673.38863114366 53.033 0.67541 53.033 52.757 53.432 -3.8147E-06 275 52 8 0 0 0 0.024402 1 26206 50.473 32.161 1 1.8749 1.6241 0 15802000 5713800 10088000 29946 168 11354 11663 46714 46714 RPYEPINSIK 10 1 1 Unmodified _RPYEPINSIK_ 0 0 1 Q8WUA4;Q53SY8;H0Y4Q6;H7C3X9 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.8382 2 608.837862 1215.66117 78295.87 0.6053 0.00036853 -0.40038 -0.00024377 0.20492 0.00012476 608.837369972055 617.84919045575 36.471 0.47569 36.471 36.245 36.72 0 155 44 5 0 0 0 4.9029E-09 2 18402 125.48 125.48 1 0.63714 0.719 0 22756000 12939000 9817400 29947 1938 11355 11664 46715;46716 46715 RPYEPINSIK 10 1 1 Unmodified _RPYEPINSIK_ 0 0 1 Q8WUA4;Q53SY8;H0Y4Q6;H7C3X9 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8491 2 608.837862 1215.66117 76199.03 0.59176 0.00036028 -0.059697 -3.6346E-05 0.53206 0.00032394 608.838098878063 617.848839685282 34.787 0.37423 34.787 34.578 34.952 -3.8147E-06 111 31 5 0 0 0 0.0043209 1 17588 77.379 45.445 1 0.95309 1.0774 0 15528000 7155600 8372500 29948 1938 11355 11664 46717 46717 RPYLGPALLLTPR 13 0 2 Unmodified _RPYLGPALLLTPR_ 0 0 1 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.635 3 489.632916 1465.87692 NaN NaN NaN -0.090861 -4.4488E-05 NaN NaN NaN NaN 101.32 0.4992 101.32 101.12 101.62 0 0 0 0 0.001396 1 62449 58.32 47.71 1 NaN NaN 0 3875900 3875900 0 29949 1879 11356 11665 46718 46718 RPYLGPALLLTPR 13 0 2 Unmodified _RPYLGPALLLTPR_ 0 0 1 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.6332 3 489.632916 1465.87692 NaN NaN NaN -0.082323 -4.0308E-05 NaN NaN NaN NaN 99.19 0.89209 99.19 98.877 99.769 0 0 0 0 0.0012658 2 62076 60.157 52.053 1 NaN NaN 0 6546000 6546000 0 29950 1879 11356 11665 46719;46720 46719 RPYLGPALLLTPR 13 0 2 Unmodified _RPYLGPALLLTPR_ 0 0 1 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.6334 3 489.632916 1465.87692 87546.87 0.49299 0.00024139 0.43167 0.00021136 0.92466 0.00045275 489.632992893093 496.305254137843 111.26 0.49309 111.26 110.99 111.48 7.6294E-06 86 21 7 0 0 0 0.017519 1 64416 24.935 21.898 1 1.6728 1.5188 0 2785400 1069700 1715700 29951 1879 11356 11665 46721 46721 RPYLGPALLLTPR 13 0 2 Unmodified _RPYLGPALLLTPR_ 0 0 1 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.6329 3 489.632916 1465.87692 87934.45 0.34386 0.00016836 0.051347 2.5141E-05 0.3952 0.00019351 489.632682236693 496.305188043275 110.82 0.46488 110.82 110.58 111.04 0 102 23 6 0 0 0 0.063267 1 63111 13.119 11.214 1 1.3293 1.1944 0 2495800 1078900 1416900 29952 1879 11356 11665 46722 46722 RQAELLEK 8 1 1 Unmodified _RQAELLEK_ 0 0 1 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9;D6RBF8;A0A024R704;P78362 Q96SB4;A0A024R704 Q96SB4 SRPK1;SRPK2 SRSF protein kinase 1;SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.7968 2 493.785099 985.555644 86126.67 -0.25667 -0.00012674 0.28875 0.00014258 0.032077 1.5839E-05 493.785146967304 502.796540198096 21.888 0.36801 21.888 21.73 22.098 0 91 21 6 0 0 0 0.017876 1 8040 71.692 5.3409 1 1.6776 1.9771 0 34870000 12418000 22452000 29953 1988;212 11357 11666 46723 46723 RQAEQLSAAGEGGDAGR 17 0 2 Unmodified _RQAEQLSAAGEGGDAGR_ 0 0 1 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8166 3 558.271434 1671.79247 81725.04 0.2135 0.00011919 1.0553 0.00058916 1.2688 0.00070835 558.272001788578 564.943871173976 19.913 0.19462 19.913 19.807 20.001 0 23 5 6 0 0 0 6.5239E-15 1 6390 86.8 80.219 1 0.8937 0.96406 0 17310000 8852000 8458500 29954 858 11358 11667 46724 46724 RQAEQLSAAGEGGDAGR 17 0 2 Unmodified _RQAEQLSAAGEGGDAGR_ 0 0 1 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.9436 3 558.271434 1671.79247 81048.06 -0.038455 -2.1468E-05 -0.2331 -0.00013013 -0.27156 -0.0001516 558.271041495287 564.943502562635 19.716 0.2449 19.716 19.597 19.842 0 52 10 8 0 0 0 3.2418E-07 2 6044 69.975 69.975 1 0.94069 1.054 0 27059000 13826000 13233000 29955 858 11358 11667 46725;46726 46725 RQAEQLSAAGEGGDAGR 17 0 2 Unmodified _RQAEQLSAAGEGGDAGR_ 0 0 1 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.9123 2 836.903513 1671.79247 67424.91 0.064616 5.4077E-05 -0.41197 -0.00034478 -0.34736 -0.00029071 836.903023137625 846.91161420453 19.666 0.21683 19.666 19.597 19.814 0 37 9 6 0 0 0 0.00011526 1 6075 71.176 71.176 1 0.9193 0.93067 0 10976000 5432100 5543700 29956 858 11358 11667 46727 46727 RQAEQLSAAGEGGDAGR 17 0 2 Unmodified _RQAEQLSAAGEGGDAGR_ 0 0 1 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.9442 3 558.271434 1671.79247 81192.87 0.14078 7.8591E-05 0.36729 0.00020505 0.50806 0.00028364 558.271421986981 564.943996292867 21.468 0.29897 21.468 21.354 21.653 0 47 9 7 0 0 0 1.9579E-05 2 6509 54.171 54.171 1 1.0628 0.94589 0 3794900 1643100 2151800 29957 858 11358 11667 46728;46729 46728 RQAEQLSAAGEGGDAGR 17 0 2 Unmodified _RQAEQLSAAGEGGDAGR_ 0 0 1 B2R823;Q9NRX1;F8WBJ6 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.2787 3 558.271434 1671.79247 80482.66 0.14493 8.0911E-05 -0.0072506 -4.0478E-06 0.13768 7.6863E-05 558.271190846022 564.943674725701 21.39 0.31998 21.39 21.226 21.546 0 80 13 8 0 0 0 3.6444E-05 2 5983 45.347 45.347 1 1.1788 1.0654 0 2943500 1393600 1549900 29958 858 11358 11667 46730;46731 46730 RQAEVELASR 10 0 2 Unmodified _RQAEVELASR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.825 2 579.814919 1157.61528 80402.53 0.44546 0.00025828 0.49763 0.00028853 0.94308 0.00054681 579.815160636569 589.82345326635 22.898 0.31336 22.898 22.748 23.061 1.9073E-06 80 16 7 0 0 0 0.019845 1 8830 51.436 17.23 1 1.2934 1.4047 0 32837000 13071000 19767000 29959 1754 11359 11668 46732 46732 RQAEVELASR 10 0 2 Unmodified _RQAEVELASR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.8156 2 579.814919 1157.61528 NaN NaN NaN -3.2695 -0.0018957 NaN NaN NaN NaN 22.367 0.47919 22.367 22.084 22.563 1.9073E-06 0 0 0 0.0073665 1 8381 66.19 38.886 1 NaN NaN 0 15962000 15962000 0 29960 1754 11359 11668 46733 46733 RQAEVELASR 10 0 2 Unmodified _RQAEVELASR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.8235 2 579.814919 1157.61528 80196.34 0.51791 0.00030029 -0.05576 -3.233E-05 0.46215 0.00026796 579.814827294994 589.823154764792 24.766 0.38599 24.766 24.575 24.961 0 93 21 6 0 0 0 0.057065 1 8791 41.164 21.174 1 2.7872 2.5238 0 3131400 765490 2366000 29961 1754 11359 11668 46734 46734 RQAQQERDELADEIANSSGK 20 1 2 Unmodified _RQAQQERDELADEIANSSGK_ 0 0 2 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.3662 3 749.031631 2244.07306 70931.76 0.88914 0.00066599 -0.010021 -7.5059E-06 0.87912 0.00065849 749.366243046323 758.375392449146 41.654 0.31666 41.654 41.501 41.818 0 68 27 6 0 0 0 0.018498 1 21957 23.293 23.293 1 1.6368 1.7717 0 9755400 3036200 6719300 29962 81 11360 11669 46735 46735 RQAQQERDELADEIANSSGK 20 1 2 Unmodified _RQAQQERDELADEIANSSGK_ 0 0 2 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.7095 3 749.031631 2244.07306 71441.68 0.69482 0.00052044 0.19611 0.00014689 0.89092 0.00066733 749.365269127422 758.375509624959 38.512 0.37957 38.512 38.233 38.612 3.8147E-06 77 31 6 0 0 0 0.026535 1 20168 22.571 22.571 1 1.4376 1.6123 0 11191000 4842100 6348900 29963 81 11360 11669 46736 46736 RQAVTNPNNTFYATK 15 1 1 Unmodified _RQAVTNPNNTFYATK_ 0 0 1 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;D6RJI2;D6RA73 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.9511 2 862.939367 1723.86418 NaN NaN NaN 0.52864 0.00045619 NaN NaN NaN NaN 33.335 0.19965 33.335 33.217 33.417 0 0 0 0 0.053647 1 16634 36.303 25.398 1 NaN NaN 0 2777100 0 2777100 29964 1092 11361 11670 46737 46737 RQAVTNPNNTFYATK 15 1 1 Unmodified _RQAVTNPNNTFYATK_ 0 0 1 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;D6RJI2;D6RA73 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.6287 3 575.62867 1723.86418 81939.52 0.2093 0.00012048 0.16607 9.5592E-05 0.37537 0.00021607 575.628755591221 581.636200631522 39.555 0.36686 39.555 39.346 39.713 0 101 27 5 0 0 0 0.047367 1 17615 14.793 14.793 1 1.445 1.2328 0 2947100 1284900 1662200 29965 1092 11361 11670 46738 46738 RQDLLSR 7 0 2 Unmodified _RQDLLSR_ 0 0 1 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 444.2565 2 444.256508 886.498464 89139.64 0.052853 2.348E-05 -0.18518 -8.2269E-05 -0.13233 -5.8789E-05 444.256263411286 454.264719757075 21.677 0.48056 21.677 21.516 21.996 0 82 22 6 0 0 0 6.2475E-05 1 7769 150.05 39.246 1 2.2648 2.6166 0 68881000 20676000 48205000 29966 397;1622 11362 11671 46739 46739 RQDSDLVQCGVTSPSSAEATGK 22 1 1 Unmodified _RQDSDLVQCGVTSPSSAEATGK_ 0 0 1 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.3638 3 765.029011 2292.0652 NaN NaN NaN -0.86245 -0.0006598 NaN NaN NaN NaN 45.103 0.089569 45.103 45.038 45.127 0 0 0 0 5.8433E-05 1 24274 35.94 30.126 1 NaN NaN 0 2008800 2008800 0 29967 2052 11363 11672 46740 46740 RQDSDLVQCGVTSPSSAEATGK 22 1 1 Unmodified _RQDSDLVQCGVTSPSSAEATGK_ 0 0 1 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.0294 3 765.029011 2292.0652 NaN NaN NaN -0.28634 -0.00021906 NaN NaN NaN NaN 43.959 0.28639 43.959 43.802 44.089 0 0 0 0 5.7778E-05 2 23930 41.672 38.481 1 NaN NaN 0 5418600 5418600 0 29968 2052 11363 11672 46741;46742 46741 RQDSDLVQCGVTSPSSAEATGK 22 1 1 Unmodified _RQDSDLVQCGVTSPSSAEATGK_ 0 0 1 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.0368 3 765.029011 2292.0652 70811.16 0.47978 0.00036704 -0.15393 -0.00011776 0.32584 0.00024928 765.363021949203 771.036347234106 52.826 0.42374 52.826 52.61 53.034 -3.8147E-06 144 33 7 0 0 0 0.024435 2 26192 15.546 14.152 1 0.77763 0.68818 0 2255700 995190 1260500 29969 2052 11363 11672 46743;46744 46744 RQDSDLVQCGVTSPSSAEATGK 22 1 1 Unmodified _RQDSDLVQCGVTSPSSAEATGK_ 0 0 1 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.0291 3 765.029011 2292.0652 70192.45 0.57305 0.0004384 -0.24046 -0.00018396 0.3326 0.00025445 765.363032700002 771.036462963568 53.347 0.40709 53.347 53.116 53.523 0 108 27 6 0 0 0 0.015639 2 25867 18.881 17.419 1 0.92893 0.80041 0 1942200 1079400 862830 29970 2052 11363 11672 46745;46746 46746 RQELDAFLAQALSPK 15 1 1 Unmodified _RQELDAFLAQALSPK_ 0 0 1 Q9NZB2;A0A0C4DG79 Q9NZB2 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.3126 3 562.9773 1685.91007 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.6 1 119.6 119.1 120.1 -7.6294E-06 0 0 0 0.013428 1 69954 42.257 23.893 1 29971 2086 11364 11673 46747 46747 RQELEAELAK 10 1 1 Unmodified _RQELEAELAK_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.8253 2 593.824952 1185.63535 79218.16 0.72354 0.00042966 -0.29275 -0.00017384 0.43079 0.00025582 593.824622246603 602.836023236548 31.4 0.69893 31.4 31.016 31.715 0 199 62 5 0 0 0 0.020052 1 15530 51.268 31.661 1 1.3416 1.528 0 19443000 8092000 11351000 29972 1754 11365 11674 46748 46748 RQETVTDLAAAGK 13 1 1 Unmodified _RQETVTDLAAAGK_ 0 0 1 D6RJE1;D6RE69;D6R9I1;A0A1B0GV48;D6RBC4;B4DYR8;Q8NAP3;D6RHD1 D6RJE1 D6RJE1 ZBTB38 Zinc finger and BTB domain-containing protein 38 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3776 2 680.364973 1358.71539 NaN NaN NaN 0.38467 0.00026171 NaN NaN NaN NaN 33.424 0.26892 33.424 33.228 33.497 0 0 0 0 0.0034107 1 16694 65.5 25.499 1 NaN NaN 0 4125600 0 4125600 29973 632 11366 11675 46749 46749 RQIQAAYSILSEVQQAVSQGSSDSQILDLSNR 32 0 2 Unmodified _RQIQAAYSILSEVQQAVSQGSSDSQILDLSNR_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1165.264 3 1164.59568 3490.7652 55634.03 0.24193 0.00028175 -0.16585 -0.00019315 0.076084 8.8607E-05 1164.92996321152 1171.60199474957 133 0.31708 133 132.91 133.22 0 109 11 14 0 0 0 1.4055E-65 3 86965 149.54 149.54 1 0.71652 0.78173 0 149070000 87013000 62062000 29974 139 11367 11676 46750;46751;46752 46750 RQIQAAYSILSEVQQAVSQGSSDSQILDLSNR 32 0 2 Unmodified _RQIQAAYSILSEVQQAVSQGSSDSQILDLSNR_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1165.2643 3 1164.59568 3490.7652 55874.04 0.33399 0.00038897 -0.16908 -0.00019691 0.16491 0.00019206 1165.2638389705 1171.60253760799 132.95 0.32944 132.95 132.86 133.19 0 149 14 14 0 0 0 5.2455E-78 1 89123 157.43 157.43 1 0.68996 0.82444 0 256180000 148790000 107390000 29975 139 11367 11676 46753 46753 RQIQAAYSILSEVQQAVSQGSSDSQILDLSNR 32 0 2 Unmodified _RQIQAAYSILSEVQQAVSQGSSDSQILDLSNR_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1164.5884 3 1164.59568 3490.7652 54922.35 0.13442 0.00015655 -0.4769 -0.0005554 -0.34248 -0.00039885 1164.92959260282 1171.93736087402 134.77 0.31094 134.77 134.59 134.9 0 27 6 11 0 0 0 2.1525E-08 2 82435 47.195 47.195 1 1.1535 0.92447 0 75042000 33363000 41679000 29976 139 11367 11676 46754;46755 46754 RQIQAAYSILSEVQQAVSQGSSDSQILDLSNR 32 0 2 Unmodified _RQIQAAYSILSEVQQAVSQGSSDSQILDLSNR_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1164.5862 3 1164.59568 3490.7652 55488.11 0.46035 0.00053613 -0.76514 -0.00089108 -0.30479 -0.00035496 1164.92984739154 1171.60205157714 134.72 0.16641 134.72 134.59 134.76 0 23 3 11 0 0 0 3.0773E-09 2 81498 49.209 49.209 1 1.184 1.1107 0 50023000 23066000 26957000 29977 139 11367 11676 46756;46757 46756 RQLEEAEEEAQR 12 0 2 Unmodified _RQLEEAEEEAQR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3583 2 744.357876 1486.7012 69824.8 0.31693 0.00023591 0.1509 0.00011233 0.46783 0.00034824 744.357810424067 754.366258461166 20.219 0.46921 20.219 20.001 20.471 0 80 16 10 0 0 0 3.3264E-05 1 6657 103.46 79.611 1 1.783 1.9434 0 109690000 42004000 67686000 29978 81 11368 11677 46758 46758 RQLEEAEEEAQR 12 0 2 Unmodified _RQLEEAEEEAQR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.5749 3 496.574343 1486.7012 78116.27 -0.017723 -8.801E-06 -0.34253 -0.00017009 -0.36025 -0.00017889 496.574088777887 503.246551195567 20.22 0.41504 20.22 20.078 20.493 0 86 15 11 0 0 0 7.5942E-30 1 6667 136.01 128.81 1 1.7668 1.9264 0 123070000 44883000 78189000 29979 81 11368 11677 46759 46759 RQLEEAEEEAQR 12 0 2 Unmodified _RQLEEAEEEAQR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.9089 3 496.574343 1486.7012 84465.42 0.10432 5.1801E-05 -0.20865 -0.00010361 -0.10433 -5.1807E-05 496.574286053988 503.246447893312 19.989 0.53903 19.989 19.785 20.324 0 62 20 6 0 0 0 6.2193E-24 1 6290 130.69 124.1 1 1.9253 2.2707 0 153770000 50149000 103620000 29980 81 11368 11677 46760 46760 RQLEEAEEEAQR 12 0 2 Unmodified _RQLEEAEEEAQR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.3582 2 744.357876 1486.7012 69531.23 0.46788 0.00034827 0.16949 0.00012616 0.63737 0.00047443 744.35848074644 754.365990546882 20.004 0.41451 20.004 19.842 20.257 0 95 15 10 0 0 0 1.9515E-37 1 6307 179.35 144.66 1 1.6566 1.9528 0 150660000 57098000 93563000 29981 81 11368 11677 46761 46761 RQLEEAEEEAQR 12 0 2 Unmodified _RQLEEAEEEAQR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 754.3654 2 744.357876 1486.7012 70020.87 0.36887 0.00027457 0.34039 0.00025338 0.70926 0.00052795 744.358200428016 754.366373672622 22.194 0.58852 22.194 22.008 22.597 0 105 22 10 0 0 0 9.4754E-06 2 6992 110.08 92.268 1 2.8764 2.3751 0 23872000 5751200 18120000 29982 81 11368 11677 46762;46763 46762 RQLEEAEEEAQR 12 0 2 Unmodified _RQLEEAEEEAQR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.3582 2 744.357876 1486.7012 70770.18 0.17249 0.0001284 0.45802 0.00034093 0.63051 0.00046932 744.358140813493 754.366475312671 22.12 0.72107 22.12 21.919 22.64 0 137 30 10 0 0 0 0.0011408 1 6505 67.385 43.534 1 2.5534 2.3646 0 21510000 5807600 15703000 29983 81 11368 11677 46764 46764 RQLEEAEEEAQR 12 0 2 Unmodified _RQLEEAEEEAQR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 496.5743 3 496.574343 1486.7012 84324.62 -0.18168 -9.0215E-05 0.45376 0.00022533 0.27209 0.00013511 496.574527223755 503.246748233172 22.122 0.5883 22.122 21.919 22.507 0 95 24 9 0 0 0 5.8024E-06 1 6522 87.498 83.438 1 2.7284 2.5055 0 12442000 3685200 8757100 29984 81 11368 11677 46765 46765 RQLEEQEEALR 11 0 2 Unmodified _RQLEEQEEALR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8618 2 700.860054 1399.70556 NaN NaN NaN 0.57637 0.00040396 NaN NaN NaN NaN 26.489 0.26934 26.489 26.37 26.639 1.9073E-06 0 0 0 0.028084 1 11911 60.255 33.741 1 NaN NaN 0 7969200 7969200 0 29985 2002 11369 11678 46766 46766 RQLEEQEEALR 11 0 2 Unmodified _RQLEEQEEALR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.8688 2 700.860054 1399.70556 72452.32 0.59593 0.00041766 0.74757 0.00052394 1.3435 0.0009416 700.860010017847 710.869602147892 25.746 0.27043 25.746 25.607 25.877 0 72 19 5 0 0 0 0.020003 1 11311 56.936 26.064 1 0.6751 0.74484 0 21913000 12062000 9850300 29986 2002 11369 11678 46767 46767 RQLEEQEEALR 11 0 2 Unmodified _RQLEEQEEALR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.2482 3 467.575795 1399.70556 86293.52 0.15491 7.2431E-05 -0.56324 -0.00026336 -0.40834 -0.00019093 467.575870560351 474.247144896553 25.753 0.29914 25.753 25.607 25.906 0 58 21 5 0 0 0 0.013324 1 11318 34.264 25.96 1 1.5448 1.7438 0 29945000 9015000 20930000 29987 2002 11369 11678 46768 46768 RQLEEQEEALR 11 0 2 Unmodified _RQLEEQEEALR_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.8691 2 700.860054 1399.70556 73481.9 0.48058 0.00033682 -0.091626 -6.4217E-05 0.38895 0.0002726 700.860164538859 710.868322643733 30.196 0.41294 30.196 29.964 30.376 0 120 26 8 0 0 0 0.0063092 1 12445 69.721 43.603 1 1.8281 1.5993 0 4502600 1831300 2671200 29988 2002 11369 11678 46769 46769 RQLETLGQEK 10 1 1 Unmodified _RQLETLGQEK_ 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.3307 2 601.330402 1200.64625 78565.59 0.84665 0.00050912 -0.17671 -0.00010626 0.66994 0.00040285 601.33025768591 610.341501802146 22.33 0.42686 22.33 22.161 22.588 0 122 26 8 0 0 0 1.036E-07 1 8411 113.44 54.464 1 0.97734 1.173 0 61298000 29496000 31802000 + 29989 1156 11370 11679 46770 46770 RQLETLGQEK 10 1 1 Unmodified _RQLETLGQEK_ 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3304 2 601.330402 1200.64625 77457.8 0.21446 0.00012896 -0.039114 -2.3521E-05 0.17534 0.00010544 601.330306188051 610.341577523791 21.902 0.32864 21.902 21.779 22.107 0 70 13 7 0 0 0 4.4984E-22 2 7955 167.09 86.291 1 1.0881 1.281 0 84443000 40107000 44336000 + 29990 1156 11370 11679 46771;46772 46772 RQLETLGQEK 10 1 1 Unmodified _RQLETLGQEK_ 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.342 2 601.330402 1200.64625 78141.73 0.46016 0.00027671 0.089011 5.3525E-05 0.54917 0.00033023 601.330372961501 610.341647034346 24.19 0.42743 24.19 24.025 24.452 1.9073E-06 94 24 6 0 0 0 0.018944 1 8398 52.167 26.229 1 1.8908 1.5827 0 6648000 2360300 4287700 + 29991 1156 11370 11679 46773 46773 RQLETLGQEK 10 1 1 Unmodified _RQLETLGQEK_ 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.3419 2 601.330402 1200.64625 77783.1 0.42407 0.000255 0.10799 6.4936E-05 0.53205 0.00031994 601.33041292137 610.341683619754 24.056 0.38593 24.056 23.886 24.272 1.9073E-06 108 24 6 0 0 0 0.00040961 1 7838 92.611 47.474 1 1.9379 1.6223 0 5735000 1969700 3765400 + 29992 1156 11370 11679 46774 46774 RQLSLDINK 9 1 1 Unmodified _RQLSLDINK_ 0 0 1 O60885;A0A024R7H8;A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1 O60885;A0A024RCR5 A0A024RCR5 BRD4;BRD2 Bromodomain-containing protein 4;Bromodomain-containing protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.82 2 543.81693 1085.61931 NaN NaN NaN 1.0712 0.00058253 NaN NaN NaN NaN 41.001 0.37718 41.001 40.74 41.117 0 0 0 0 0.0017247 1 21490 84.743 8.7085 1 NaN NaN 0 7625800 7625800 0 29993 367;1399 11371 11680 46775 46775 RQLYMVSK 8 1 1 Oxidation (M) _RQLYM(ox)VSK_ RQLYM(1)VSK RQLYM(65.25)VSK 0 1 1 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.7927 2 520.781502 1039.54845 NaN NaN NaN -0.075992 -3.9575E-05 NaN NaN NaN NaN 21.946 0.21828 21.946 21.784 22.002 1.9073E-06 0 0 0 0.011192 1 8082 65.252 28.857 1 NaN NaN 0 3333600 0 3333600 29994 1694 11372 11681 46776 46776 1526 RQNGDDPLLTYR 12 0 2 Unmodified _RQNGDDPLLTYR_ 0 0 1 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.2477 3 483.24779 1446.72154 85330.51 0.48142 0.00023265 -0.26075 -0.00012601 0.22067 0.00010664 483.247559181922 489.91980428111 49.488 0.38165 49.488 49.268 49.649 0 74 23 4 0 0 0 8.1634E-09 1 27215 103.46 98.282 1 1.2604 1.3709 0 53418000 27381000 26038000 29995 1440 11373 11682 46777 46777 RQNGDDPLLTYR 12 0 2 Unmodified _RQNGDDPLLTYR_ 0 0 1 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 490.255 3 483.24779 1446.72154 85438.2 0.248 0.00011984 0.73396 0.00035469 0.98196 0.00047453 483.582598165812 489.919982104516 56.765 0.52673 56.765 56.565 57.092 0 183 35 9 0 0 0 0.0020883 1 28607 37.364 31.64 1 1.0345 0.88762 0 5475000 2670000 2805000 29996 1440 11373 11682 46778 46778 RQNGDDPLLTYR 12 0 2 Unmodified _RQNGDDPLLTYR_ 0 0 1 P02545;W8QEH3;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.9202 3 483.24779 1446.72154 86304.83 0.39795 0.00019231 -0.016532 -7.9893E-06 0.38141 0.00018432 483.247625521027 489.919890154621 56.997 0.81467 56.997 56.777 57.591 0 191 53 6 0 0 0 0.0056213 1 28124 30.483 30.483 1 1.1664 1.0556 0 4285600 1822600 2463100 29997 1440 11373 11682 46779 46779 RQNIGVATFIGLDK 14 1 1 Unmodified _RQNIGVATFIGLDK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.6259 3 511.291219 1530.85183 83758.8 0.68179 0.00034859 -0.25296 -0.00012934 0.42883 0.00021926 511.291068559895 517.298446136563 92.159 0.92456 92.159 91.673 92.598 0 351 86 6 0 0 0 0.0041604 1 55606 34.909 26.733 1 0.87308 1.0256 0 33304000 18063000 15241000 29998 2070 11374 11683 46780 46780 RQNIGVATFIGLDK 14 1 1 Unmodified _RQNIGVATFIGLDK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.9352 2 766.43319 1530.85183 70668.82 0.8885 0.00068098 0.023131 1.7728E-05 0.91163 0.00069871 766.433304099769 775.444289789812 92.158 1.0577 92.158 91.696 92.754 0 390 98 6 0 0 0 3.199E-05 1 55799 119.39 77.846 1 0.84032 1.0029 0 51451000 29761000 21690000 29999 2070 11374 11683 46781 46781 RQNIGVATFIGLDK 14 1 1 Unmodified _RQNIGVATFIGLDK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.2908 3 511.291219 1530.85183 83851.41 0.88593 0.00045297 -0.27688 -0.00014157 0.60905 0.0003114 511.29113077541 517.29847903522 90.348 0.91786 90.348 89.923 90.841 0 381 77 7 0 0 0 2.1682E-05 2 55781 87.519 87.519 1 0.82414 0.97022 0 84661000 42739000 41922000 30000 2070 11374 11683 46782;46783 46783 RQNIGVATFIGLDK 14 1 1 Unmodified _RQNIGVATFIGLDK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.434 2 766.43319 1530.85183 70654.1 1.1093 0.00085022 0.088731 6.8006E-05 1.1981 0.00091823 766.433208246556 775.444628934794 90.325 0.79527 90.325 89.984 90.779 0 355 67 8 0 0 0 8.7187E-05 3 55738 101.6 59.594 1 0.73615 0.86442 0 60451000 32492000 27959000 30001 2070 11374 11683 46784;46785;46786 46784 RQNIGVATFIGLDK 14 1 1 Unmodified _RQNIGVATFIGLDK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.2986 3 511.291219 1530.85183 82800.92 0.43091 0.00022032 -0.39621 -0.00020258 0.034708 1.7746E-05 511.625441816382 517.298154275915 103.6 1.4148 103.6 103.13 104.55 7.6294E-06 371 92 7 0 0 0 0.00040134 2 58816 52.522 41.252 1 1.7351 1.5171 0 25239000 10572000 14667000 30002 2070 11374 11683 46787;46788 46788 RQNIGVATFIGLDK 14 1 1 Unmodified _RQNIGVATFIGLDK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.446 2 766.43319 1530.85183 68235.36 0.68741 0.00052685 0.56337 0.00043178 1.2508 0.00095864 766.934791224051 775.445241423746 103.59 0.94038 103.59 103.21 104.15 7.6294E-06 355 60 8 0 0 0 0.00023838 1 58978 94.191 62.183 1 1.595 1.4085 0 41568000 14765000 26803000 30003 2070 11374 11683 46789 46789 RQNIGVATFIGLDK 14 1 1 Unmodified _RQNIGVATFIGLDK_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.2918 3 511.291219 1530.85183 83068.59 0.17059 8.7219E-05 -0.20442 -0.00010452 -0.03383 -1.7297E-05 511.291052009635 517.298580150848 103.22 0.95235 103.22 102.74 103.7 -7.6294E-06 355 64 7 0 0 0 0.00098442 2 57619 46.319 46.319 1 1.7909 1.517 0 14394000 5029700 9364500 30004 2070 11374 11683 46790;46791 46791 RQPQEEVVHEDQGK 14 1 1 Unmodified _RQPQEEVVHEDQGK_ 0 0 1 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;H0YDQ3 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.618 3 560.276297 1677.80706 83885.02 0.4637 0.0002598 -0.96004 -0.00053789 -0.49634 -0.00027809 560.275967326722 566.617573442974 16.892 0.42834 16.892 16.714 17.143 0 52 14 6 0 0 0 0.0004543 1 4122 56.599 56.599 1 2.5946 2.8992 0 7039900 1534500 5505400 30005 640 11375 11684 46792 46792 RQPQEEVVHEDQGK 14 1 1 Unmodified _RQPQEEVVHEDQGK_ 0 0 1 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;H0YDQ3 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.6104 3 560.276297 1677.80706 82152.4 0.29159 0.00016337 -0.16732 -9.3744E-05 0.12428 6.9628E-05 560.276235573464 566.283490799171 16.467 0.34854 16.467 16.331 16.679 0 78 17 7 0 0 0 0.0015408 1 3601 42.568 42.568 1 2.2779 2.5034 0 4649200 1461200 3188000 30006 640 11375 11684 46793 46793 RQPQEEVVHEDQGK 14 1 1 Unmodified _RQPQEEVVHEDQGK_ 0 0 1 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;H0YDQ3 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.2842 3 560.276297 1677.80706 81621.74 0.30376 0.00017019 -0.20434 -0.00011449 0.09942 5.5703E-05 560.276289135717 566.283848305116 17.53 0.32926 17.53 17.355 17.684 0 59 18 6 0 0 0 0.0047329 1 3872 49.216 49.216 1 13.426 12.316 0 1112800 79570 1033200 30007 640 11375 11684 46794 46794 RQQEQQVPILEK 12 1 1 Unmodified _RQQEQQVPILEK_ 0 0 1 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.4253 2 748.414997 1494.81544 70631.83 0.55991 0.00041904 -0.30921 -0.00023142 0.2507 0.00018762 748.41504373923 757.425777325104 41.931 0.4627 41.931 41.715 42.178 0 144 34 6 0 0 0 0.0016899 1 22081 73.781 73.781 1 1.6899 1.9431 0 27183000 9806900 17376000 30008 587 11376 11685 46795 46795 RQQEQQVPILEK 12 1 1 Unmodified _RQQEQQVPILEK_ 0 0 1 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.2857 3 499.27909 1494.81544 85455.38 0.27642 0.00013801 -0.39194 -0.00019569 -0.11553 -5.768E-05 499.277910885356 505.286447428877 41.954 0.40454 41.954 41.735 42.14 0 102 29 5 0 0 0 0.022451 1 22229 26.148 26.148 1 1.6596 1.7876 0 14247000 4550700 9696500 30009 587 11376 11685 46796 46796 RQQEQQVPILEK 12 1 1 Unmodified _RQQEQQVPILEK_ 0 0 1 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.4273 2 748.414997 1494.81544 NaN NaN NaN 0.30299 0.00022676 NaN NaN NaN NaN 40.565 0.66427 40.565 40.176 40.84 0 0 0 0 0.009316 1 21677 55.401 22.877 1 NaN NaN 0 16047000 0 16047000 30010 587 11376 11685 46797 46797 RQQQEEEDLNLEDR 14 0 2 Unmodified _RQQQEEEDLNLEDR_ 0 0 1 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.3201 3 601.281888 1800.82383 81832.87 0.52862 0.00031785 0.040135 2.4132E-05 0.56875 0.00034198 601.616051089625 607.954279889452 35.278 0.39029 35.278 35.101 35.491 0 92 34 4 0 0 0 0.025349 1 17719 28.549 28.549 1 0.78299 0.87014 0 9574500 4545100 5029500 30011 1820 11377 11686 46798 46798 RQQQEEEDLNLEDR 14 0 2 Unmodified _RQQQEEEDLNLEDR_ 0 0 1 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.9553 3 601.281888 1800.82383 82505.38 0.43184 0.00025966 0.68598 0.00041247 1.1178 0.00067213 601.28210424593 607.954782289573 34.04 0.39309 34.04 33.807 34.2 0 78 30 6 0 0 0 4.9438E-05 1 17165 69.729 69.729 1 1.0173 1.0563 0 12940000 7169400 5770500 30012 1820 11377 11686 46799 46799 RQSLELQK 8 1 1 Unmodified _RQSLELQK_ 0 0 1 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.3015 2 501.290548 1000.56654 NaN NaN NaN -0.73505 -0.00036847 NaN NaN NaN NaN 21.123 0.36739 21.123 21.015 21.382 0 0 0 0 0.0050996 1 7303 89.296 13.261 1 NaN NaN 0 27598000 0 27598000 30013 2103 11378 11687 46800 46800 RQTQSESSNYDSELEK 16 1 1 Unmodified _RQTQSESSNYDSELEK_ 0 0 1 A4LAA3;P46100;A0A096LNW1;A0A096LNL9 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.2966 3 634.288819 1899.84463 76871.29 0.48976 0.00031065 -0.49209 -0.00031213 -0.0023375 -1.4826E-06 634.623401298776 640.295495320189 27.034 0.34448 27.034 26.894 27.238 -1.9073E-06 61 17 7 0 0 0 0.039513 2 10369 15.766 12.428 1 2.5264 2.3049 0 1632300 435840 1196500 30014 672 11379 11688 46801;46802 46801 RQVDQLTNDK 10 1 1 Unmodified _RQVDQLTNDK_ 0 0 1 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.8179 2 608.817658 1215.62076 77241.35 0.51137 0.00031133 0.26496 0.00016131 0.77634 0.00047265 608.817470903382 617.829346637244 18.103 0.88622 18.103 17.558 18.445 0 156 46 5 0 0 0 1.2339E-05 2 5127 107.21 84.134 1 1.3941 1.5305 0 17440000 7506500 9933900 30015 1457 11380 11689 46803;46804 46804 RQVDQLTNDK 10 1 1 Unmodified _RQVDQLTNDK_ 0 0 1 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.8181 2 608.817658 1215.62076 NaN NaN NaN -0.76014 -0.00046279 NaN NaN NaN NaN 17.912 0.37392 17.912 17.735 18.109 0 0 0 0 1.0294E-40 1 4729 199.67 154.51 1 NaN NaN 0 3698100 3698100 0 30016 1457 11380 11689 46805 46805 RQVDQLTNDK 10 1 1 Unmodified _RQVDQLTNDK_ 0 0 1 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0 V9HWE1 V9HWE1 HEL113;VIM Vimentin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8305 2 608.817658 1215.62076 NaN NaN NaN NaN NaN NaN NaN NaN NaN 17.956 1 17.956 17.456 18.456 0 0 0 0 0.0074196 1 4794 67.726 35.406 1 30017 1457 11380 11689 46806 46806 RQVDQLTNDK 10 1 1 Unmodified _RQVDQLTNDK_ 0 0 1 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.8297 2 608.817658 1215.62076 76866.55 -0.028322 -1.7243E-05 0.42083 0.00025621 0.39251 0.00023897 608.817407228031 617.829333140963 19.224 0.36647 19.224 18.982 19.349 -1.9073E-06 98 22 6 0 0 0 0.057065 1 4928 41.164 19.016 1 3.4262 2.8385 0 3873800 884460 2989300 30018 1457 11380 11689 46807 46807 RQVGPQSGEVR 11 0 2 Unmodified _RQVGPQSGEVR_ 0 0 1 A0A0A0MS90;A8K654;B4DI41;Q9UIS9;B4DUR3;Q59EP6;K7EPZ6 A0A0A0MS90 A0A0A0MS90 MBD1 Methyl-CpG-binding domain protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.8265 2 606.825818 1211.63708 77905.13 0.47483 0.00028814 0.28536 0.00017317 0.76019 0.0004613 606.825930834477 616.834628362325 16.7 0.28992 16.7 16.568 16.858 0 49 10 6 0 0 0 0.011389 1 3947 53.756 10.449 1 0.77703 0.86085 0 10798000 5745200 5052900 30019 477 11381 11690 46808 46808 RQVLEGEEIAYK 12 1 1 Unmodified _RQVLEGEEIAYK_ 0 0 1 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.8948 2 717.882998 1433.75144 72403.66 0.76176 0.00054686 0.66872 0.00048006 1.4305 0.0010269 718.386103488606 726.893918996281 54.406 0.45129 54.406 54.196 54.648 3.8147E-06 126 31 6 0 0 0 0.031552 2 27070 40.496 40.496 1 1.5273 1.2768 0 3452000 1189500 2262500 30020 1682 11382 11691 46809;46810 46809 RQVLEGEEIAYK 12 1 1 Unmodified _RQVLEGEEIAYK_ 0 0 1 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 726.8945 2 717.882998 1433.75144 73114.68 0.53849 0.00038657 1.1347 0.00081457 1.6732 0.0012011 718.386065338326 726.894291268647 54.776 0.48314 54.776 54.53 55.014 0 159 36 6 0 0 0 0.03541 1 26757 38.875 38.875 1 1.3697 1.1534 0 4184300 1914400 2269800 30021 1682 11382 11691 46811 46811 RQVQNLVNK 9 1 1 Unmodified _RQVQNLVNK_ 0 0 1 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.8229 2 549.822547 1097.63054 82511.41 0.25925 0.00014254 0.062266 3.4235E-05 0.32151 0.00017678 549.822652429243 558.833954547888 19.877 0.17917 19.877 19.787 19.966 1.9073E-06 21 5 5 0 0 0 0.01816 1 6438 58.917 26.597 1 0.70515 0.77883 0 18486000 10116000 8369300 30022 1486 11383 11692 46812 46812 RQVQNLVNK 9 1 1 Unmodified _RQVQNLVNK_ 0 0 1 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.8225 2 549.822547 1097.63054 81687.91 0.34598 0.00019023 0.092974 5.1119E-05 0.43895 0.00024135 549.8225293001 558.833803735774 19.414 0.26749 19.414 19.282 19.549 0 44 10 7 0 0 0 0.00028355 1 5853 107.59 64.995 1 0.54139 0.62138 0 24437000 15580000 8856900 30023 1486 11383 11692 46813 46813 RQVQSLMVHQR 11 0 2 Oxidation (M) _RQVQSLM(ox)VHQR_ RQVQSLM(1)VHQR RQVQSLM(45.43)VHQR 0 1 1 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;J3QKS7;H7C048 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2567 3 466.58586 1396.73575 93142.3 -0.27295 -0.00012735 -0.62958 -0.00029375 -0.90252 -0.0004211 466.919643042602 473.25749809441 17.513 0.25517 17.513 17.377 17.632 0 40 9 7 0 0 0 0.0058888 1 4424 45.433 40.917 1 1.3808 1.3521 0 2905200 1224800 1680400 30024 86 11384 11693 46814 46814 83 RQVSIEEGER 10 0 2 Unmodified _RQVSIEEGER_ 0 0 1 Q6FGX3;Q53ET8;A0A024R5J5;A0A024R5H8;P20340;B7Z5Z9;Q53S08 Q6FGX3 Q6FGX3 RAB6A;RAB6C Ras-related protein Rab-6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.818 2 601.809833 1201.60511 75893.2 -0.072955 -4.3905E-05 0.50336 0.00030293 0.43041 0.00025902 601.810983030899 611.817887582316 19.734 0.24555 19.734 19.619 19.865 0 27 10 5 0 0 0 0.0060505 1 6078 70.977 45.24 1 0.68772 0.72174 0 13872000 7900600 5971800 30025 182 11385 11694 46815 46815 RQYELLK 7 1 1 Unmodified _RQYELLK_ 0 0 1 Q59HG1;O95239;Q6PKB2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.277 2 475.276909 948.539266 91344.2 0.54138 0.00025731 0.47283 0.00022473 1.0142 0.00048203 475.277192228495 484.288037843895 29.247 0.81049 29.247 29.134 29.945 0 157 60 6 0 0 0 0.016799 1 14131 117.17 46.257 1 0.87635 1.0269 0 55467000 27483000 27984000 30026 1803 11386 11695 46816 46816 RQYELLK 7 1 1 Unmodified _RQYELLK_ 0 0 1 Q59HG1;O95239;Q6PKB2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.2773 2 475.276909 948.539266 87786.66 0.23557 0.00011196 0.28333 0.00013466 0.5189 0.00024662 475.276961634248 484.288155033807 33.704 0.43857 33.704 33.547 33.985 0 148 34 7 0 0 0 0.048697 2 14296 70.912 66.799 1 1.5334 1.3019 0 23059000 9288500 13770000 30027 1803 11386 11695 46817;46818 46817 RSAAEMYGSSFDLDYDFQR 19 0 2 Oxidation (M) _RSAAEM(ox)YGSSFDLDYDFQR_ RSAAEM(1)YGSSFDLDYDFQR RSAAEM(54.22)YGSSFDLDYDFQR 0 1 1 G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6;G3V5X6;G3V3K6;G3V251 G3V4W0 G3V4W0 HNRNPC MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.3352 3 758.66378 2272.96951 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.324 1 90.324 89.824 90.824 0 0 0 0 0.00027253 1 54568 54.225 45.731 1 30028 837 11387 11696 46819 46819 665 RSAAEMYGSSFDLDYDFQR 19 0 2 Oxidation (M) _RSAAEM(ox)YGSSFDLDYDFQR_ RSAAEM(1)YGSSFDLDYDFQR RSAAEM(54.67)YGSSFDLDYDFQR 0 1 1 G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6;G3V5X6;G3V3K6;G3V251 G3V4W0 G3V4W0 HNRNPC MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.6716 3 758.66378 2272.96951 70925.63 0.49344 0.00037435 0.0027149 2.0597E-06 0.49615 0.00037641 758.663651048913 765.670141434019 102.46 0.51459 102.46 102.21 102.73 0 146 35 7 0 0 0 1.1249E-05 1 57246 54.668 54.668 1 0.45096 0.40795 0 3804300 2501700 1302500 30029 837 11387 11696 46820 46820 665 RSEKPPAGSICR 12 1 2 Unmodified _RSEKPPAGSICR_ 0 0 2 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.5818 3 453.238349 1356.69322 89395.65 -0.23832 -0.00010802 -0.14616 -6.6244E-05 -0.38448 -0.00017426 453.238376911646 462.581725575218 16.368 0.3879 16.368 16.199 16.587 0 105 22 7 0 0 0 0.00092009 1 3598 62.042 62.042 1 0.87494 0.97971 0 9071700 4614400 4457300 30030 1618 11388 11697 46821 46821 RSELNQDAEPASSQETK 17 1 1 Unmodified _RSELNQDAEPASSQETK_ 0 0 1 Q08E77;A0A024RDV0;Q5TAP6 Q08E77 Q08E77 UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 954.9598 2 945.445408 1888.87626 63646.22 0.38272 0.00036184 0.38898 0.00036776 0.77169 0.00072959 945.945917624141 954.455448575281 20.753 0.23667 20.753 20.608 20.844 0 41 9 8 0 0 0 0.0030808 1 7146 38.021 29.292 1 0.81231 0.8921 0 8792500 5695500 3097000 30031 393 11389 11698 46822 46822 RSELNQDAEPASSQETK 17 1 1 Unmodified _RSELNQDAEPASSQETK_ 0 0 1 Q08E77;A0A024RDV0;Q5TAP6 Q08E77 Q08E77 UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 954.4562 2 945.445408 1888.87626 62517.73 0.67025 0.00063368 0.47982 0.00045364 1.1501 0.0010873 945.445049151034 954.456354817353 20.596 0.18042 20.596 20.485 20.665 0 31 5 8 0 0 0 0.027434 1 6858 27.664 24.239 1 1.2214 1.3516 0 7549300 3001000 4548300 30032 393 11389 11698 46823 46823 RSELSQDAEPAGSQETK 17 1 1 Unmodified _RSELSQDAEPAGSQETK_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.6334 3 611.625543 1831.8548 76978.81 0.19205 0.00011746 0.066967 4.0958E-05 0.25902 0.00015842 611.625389281426 617.633175821964 20.316 0.53844 20.316 20.144 20.682 0 79 22 8 0 0 0 3.4712E-14 2 6741 106.29 102.25 1 1.0666 1.283 0 87554000 43287000 44266000 30033 2008 11390 11699 46824;46825 46824 RSELSQDAEPAGSQETK 17 1 1 Unmodified _RSELSQDAEPAGSQETK_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.4377 2 916.934676 1831.8548 63420.12 0.22887 0.00020986 0.069529 6.3753E-05 0.2984 0.00027361 916.935173110626 925.945917901534 20.333 0.32312 20.333 20.108 20.432 0 66 11 9 0 0 0 7.3678E-45 1 6757 194.23 168.11 1 1.1009 1.3222 0 68268000 31624000 36644000 30034 2008 11390 11699 46826 46826 RSELSQDAEPAGSQETK 17 1 1 Unmodified _RSELSQDAEPAGSQETK_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.9346 2 916.934676 1831.8548 63741.92 0.46355 0.00042505 0.26751 0.00024529 0.73106 0.00067034 916.934877231884 925.94611256282 20.176 0.33243 20.176 20.018 20.35 0 62 11 9 0 0 0 2.0853E-68 2 6450 230.16 212.03 1 1.1174 1.305 0 48275000 21973000 26301000 30035 2008 11390 11699 46827;46828 46827 RSELSQDAEPAGSQETK 17 1 1 Unmodified _RSELSQDAEPAGSQETK_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.6258 3 611.625543 1831.8548 76650.97 0.31675 0.00019373 -0.0074274 -4.5428E-06 0.30932 0.00018919 611.625533841256 617.633067682111 20.148 0.36349 20.148 20.018 20.381 0 76 12 8 0 0 0 1.0829E-09 1 6467 105.06 105.06 1 1.103 1.3018 0 127740000 60596000 67141000 30036 2008 11390 11699 46829 46829 RSELSQDAEPAGSQETK 17 1 1 Unmodified _RSELSQDAEPAGSQETK_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 925.9474 2 916.934676 1831.8548 62958.39 0.21932 0.00020111 0.57471 0.00052697 0.79403 0.00072808 916.935153980128 925.946328109861 22.264 0.35168 22.264 22.061 22.413 1.9073E-06 78 12 9 0 0 0 0.031474 2 7039 34.685 31.556 1 1.6175 1.3948 0 12586000 4707600 7878400 30037 2008 11390 11699 46830;46831 46830 RSELSQDAEPAGSQETK 17 1 1 Unmodified _RSELSQDAEPAGSQETK_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.6259 3 611.625543 1831.8548 76653.92 0.1042 6.3731E-05 0.51158 0.0003129 0.61578 0.00037663 611.625846581954 617.633320838869 22.239 0.40754 22.239 22.032 22.439 1.9073E-06 56 14 5 0 0 0 4.7808E-06 1 7064 83.894 80.174 1 1.5857 1.3967 0 36469000 13056000 23413000 30038 2008 11390 11699 46832 46832 RSELSQDAEPAGSQETK 17 1 1 Unmodified _RSELSQDAEPAGSQETK_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 925.9446 2 916.934676 1831.8548 62827.53 0.060581 5.5548E-05 0.42742 0.00039191 0.488 0.00044746 916.934889748743 925.946327297675 22.201 0.4223 22.201 21.975 22.398 1.9073E-06 103 17 9 0 0 0 0.0013917 1 6534 45.115 39.509 1 1.4621 1.2363 0 10024000 3956000 6067900 30039 2008 11390 11699 46833 46833 RSELSQDAEPAGSQETK 17 1 1 Unmodified _RSELSQDAEPAGSQETK_ 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.6259 3 611.625543 1831.8548 76298.23 0.099346 6.0763E-05 0.31952 0.00019543 0.41887 0.00025619 611.625580866997 617.633281270911 22.199 0.40974 22.199 22.007 22.416 0 105 17 11 0 0 0 3.6797E-05 1 6576 55.189 55.189 1 1.5954 1.3509 0 13238000 5123800 8114300 30040 2008 11390 11699 46834 46834 RSFIPSLVEK 10 1 1 Unmodified _RSFIPSLVEK_ 0 0 1 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.3434 2 588.342781 1174.67101 77817.68 0.6842 0.00040254 0.30397 0.00017884 0.98817 0.00058138 588.342611189248 597.354064323416 73.967 1.5899 73.967 73.54 75.13 0 542 137 7 0 0 0 0.00095987 2 43329 84.687 45.665 1 0.88513 1.0577 0 53345000 30654000 22691000 30041 1726 11391 11700 46835;46836 46836 RSFIPSLVEK 10 1 1 Unmodified _RSFIPSLVEK_ 0 0 1 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.3437 2 588.342781 1174.67101 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.275 1 71.275 70.775 71.775 0 0 0 0 2.8384E-05 1 42699 99.568 45.6 1 30042 1726 11391 11700 46837 46837 RSFLLDLLNATGK 13 1 1 Unmodified _RSFLLDLLNATGK_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.429 2 724.417008 1446.81946 72842.67 1.0576 0.00076614 -0.18182 -0.00013171 0.87578 0.00063443 724.416550235393 733.428015105178 118.32 1.337 118.32 117.71 119.05 0 238 78 5 0 0 0 0.00052141 1 76208 65.395 65.395 1 1.7662 1.8892 0 12872000 5539700 7332200 30043 522 11392 11701 46838 46838 RSFLLDLLNATGK 13 1 1 Unmodified _RSFLLDLLNATGK_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.9297 2 724.417008 1446.81946 72566.51 0.69525 0.00050365 0.065757 4.7636E-05 0.76101 0.00055129 724.417051807929 733.428196491576 117.13 1.0299 117.13 116.55 117.58 0 222 62 6 0 0 0 0.00047177 2 76396 78.653 69.22 1 1.5753 1.8147 0 27988000 10062000 17925000 30044 522 11392 11701 46839;46840 46839 RSFLLDLLNATGK 13 1 1 Unmodified _RSFLLDLLNATGK_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.2802 3 483.280431 1446.81946 NaN NaN NaN -0.0063816 -3.0841E-06 NaN NaN NaN NaN 116.86 0.38387 116.86 116.67 117.05 0 0 0 0 0.02533 1 76461 34.432 20.468 1 NaN NaN 0 3145300 3145300 0 30045 522 11392 11701 46841 46841 RSFLLDLLNATGK 13 1 1 Unmodified _RSFLLDLLNATGK_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.2881 3 483.280431 1446.81946 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.73 1 116.73 116.23 117.23 0 0 0 0 0.0024093 1 76436 57.328 49.223 1 30046 522 11392 11701 46842 46842 RSFVPEEEK 9 1 1 Unmodified _RSFVPEEEK_ 0 0 1 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.7964 2 560.785296 1119.55604 80041.82 0.42537 0.00023854 -0.2715 -0.00015225 0.15387 8.629E-05 560.784933064848 569.796302985462 24.998 0.46892 24.998 24.835 25.304 0 53 17 6 0 0 0 0.0010435 1 10647 96.665 96.665 1 0.74221 0.85984 0 34480000 20779000 13701000 30047 590 11393 11702 46843 46843 RSFVPEEEK 9 1 1 Unmodified _RSFVPEEEK_ 0 0 1 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.7969 2 560.785296 1119.55604 82080.74 0.19934 0.00011179 0.082423 4.6221E-05 0.28176 0.00015801 560.78513386586 569.796539426078 28.129 0.42023 28.129 27.926 28.346 0 86 18 7 0 0 0 0.033222 1 10580 50.805 50.805 1 1.467 1.2374 0 3858800 1545800 2313000 30048 590 11393 11702 46844 46844 RSGASAAPAASAAAALAPSATR 22 0 2 Unmodified _RSGASAAPAASAAAALAPSATR_ 0 0 1 A0A0M3HER2 A0A0M3HER2 A0A0M3HER2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.3492 3 642.676572 1925.00789 75885.7 0.59183 0.00038035 -0.25149 -0.00016163 0.34034 0.00021873 643.010977680608 649.348326571371 58.719 1.1268 58.719 58.034 59.16 0 487 90 8 0 0 0 4.1302E-09 4 33263 69.72 69.72 1 1.247 1.3551 0 40126000 14409000 25716000 30049 541 11394 11703 46845;46846;46847;46848 46847 RSGASAAPAASAAAALAPSATR 22 0 2 Unmodified _RSGASAAPAASAAAALAPSATR_ 0 0 1 A0A0M3HER2 A0A0M3HER2 A0A0M3HER2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.3494 3 642.676572 1925.00789 75729.77 0.63322 0.00040695 -0.18476 -0.00011874 0.44846 0.00028821 643.010866056173 649.348741505974 56.511 0.91898 56.511 55.934 56.853 0 386 70 8 0 0 0 4.4841E-12 2 32371 72.916 72.916 1 1.1978 1.365 0 40215000 19261000 20954000 30050 541 11394 11703 46849;46850 46849 RSGASAAPAASAAAALAPSATR 22 0 2 Unmodified _RSGASAAPAASAAAALAPSATR_ 0 0 1 A0A0M3HER2 A0A0M3HER2 A0A0M3HER2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.6769 3 642.676572 1925.00789 74818.54 0.65664 0.00042201 0.42896 0.00027568 1.0856 0.00069769 642.67679705392 649.349096198901 67.306 0.81703 67.306 66.974 67.791 0 438 61 10 0 0 0 3.1385E-09 4 34936 54.559 54.559 1 1.6579 1.3653 0 26425000 10365000 16060000 30051 541 11394 11703 46851;46852;46853;46854 46853 RSGASAAPAASAAAALAPSATR 22 0 2 Unmodified _RSGASAAPAASAAAALAPSATR_ 0 0 1 A0A0M3HER2 A0A0M3HER2 A0A0M3HER2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.6773 3 642.676572 1925.00789 74485.3 0.51339 0.00032995 0.087752 5.6396E-05 0.60115 0.00038634 642.676591953013 649.348950451641 67.743 0.73817 67.743 67.371 68.109 0 378 52 10 0 0 0 1.4073E-08 2 34407 55.705 55.705 1 1.6883 1.5617 0 20001000 7490500 12511000 30052 541 11394 11703 46855;46856 46856 RSGASGASAAPAASAAAALAPSATR 25 0 2 Unmodified _RSGASGASAAPAASAAAALAPSATR_ 0 0 1 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3739 3 714.37344 2140.09849 70650.24 0.52486 0.00037495 0.043277 3.0916E-05 0.56814 0.00040586 714.707728261335 721.045627574915 62.292 0.90819 62.292 61.821 62.729 0 521 80 8 0 0 0 5.3082E-28 2 35815 94.087 90.699 1 1.239 1.3489 0 72533000 34377000 38156000 30053 1882 11395 11704 46857;46858 46858 RSGASGASAAPAASAAAALAPSATR 25 0 2 Unmodified _RSGASGASAAPAASAAAALAPSATR_ 0 0 1 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.7074 3 714.37344 2140.09849 71573.7 0.41465 0.00029621 0.55867 0.0003991 0.97331 0.00069531 714.374522720235 721.380185862941 60.381 0.97041 60.381 59.804 60.774 0 375 65 9 0 0 0 1.4148E-16 3 35027 83.701 80.267 1 1.2516 1.4524 0 81710000 38372000 43338000 30054 1882 11395 11704 46859;46860;46861 46861 RSGASGASAAPAASAAAALAPSATR 25 0 2 Unmodified _RSGASGASAAPAASAAAALAPSATR_ 0 0 1 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.3799 3 714.37344 2140.09849 70458.67 0.47847 0.00034181 0.1127 8.0512E-05 0.59118 0.00042232 714.707750654907 721.045734750721 71.525 1.007 71.525 70.921 71.928 0 472 69 12 0 0 0 2.7275E-13 2 37583 63.138 59.75 1 1.694 1.362 0 66405000 25086000 41319000 30055 1882 11395 11704 46862;46863 46863 RSGASGASAAPAASAAAALAPSATR 25 0 2 Unmodified _RSGASGASAAPAASAAAALAPSATR_ 0 0 1 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.708 3 714.37344 2140.09849 71013.48 0.24815 0.00017727 0.34057 0.00024329 0.58872 0.00042056 714.708011499489 721.04588963675 71.873 0.7529 71.873 71.547 72.3 0 422 55 12 0 0 0 9.6085E-13 2 37025 53.475 50.087 1 1.8266 1.7148 0 52378000 20231000 32147000 30056 1882 11395 11704 46864;46865 46864 RSGVDGPHFPLSLSTCLFGR 20 0 2 Unmodified _RSGVDGPHFPLSLSTCLFGR_ 0 0 1 P46013;Q70L72;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.7137 3 735.040745 2202.10041 72090.67 0.74452 0.00054725 -0.56949 -0.0004186 0.17503 0.00012866 735.708603449465 742.046898678161 120.73 0.4371 120.73 120.52 120.96 0 84 20 8 0 0 0 3.152E-06 3 71674 40.158 40.158 1 3.4212 2.9543 0 5126900 1746300 3380600 30057 1569;1864 11396 11705 46866;46867;46868 46866 RSGVDGPHFPLSLSTCLFGR 20 0 2 Unmodified _RSGVDGPHFPLSLSTCLFGR_ 0 0 1 P46013;Q70L72;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.7876 4 551.532378 2202.10041 80580.47 0.5008 0.00027621 -0.15042 -8.2963E-05 0.35038 0.00019324 551.532386781307 556.536537095857 120.72 0.6038 120.72 120.5 121.1 0 161 28 9 0 0 0 3.8758E-07 2 71690 52.451 52.451 1 3.5107 2.938 0 14263000 2918900 11344000 30058 1569;1864 11396 11705 46869;46870 46869 RSGVDGPHFPLSLSTCLFGR 20 0 2 Unmodified _RSGVDGPHFPLSLSTCLFGR_ 0 0 1 P46013;Q70L72;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.7839 4 551.532378 2202.10041 81279.77 0.79417 0.00043801 -0.34028 -0.00018767 0.45389 0.00025034 551.532292354204 556.787145661842 120.38 0.64297 120.38 120.16 120.8 0 212 34 10 0 0 0 0.00019373 2 70554 30.21 30.21 1 3.5343 3.2417 0 11536000 2784500 8751200 30059 1569;1864 11396 11705 46871;46872 46871 RSGVDGPHFPLSLSTCLFGR 20 0 2 Unmodified _RSGVDGPHFPLSLSTCLFGR_ 0 0 1 P46013;Q70L72;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.0482 3 735.040745 2202.10041 NaN NaN NaN -0.14807 -0.00010884 NaN NaN NaN NaN 120.43 0.69699 120.43 120.02 120.72 0 0 0 0 0.00095253 1 70567 41.615 32.673 1 NaN NaN 0 3718200 0 3718200 30060 1569;1864 11396 11705 46873 46873 RSIAGIDQWLEVFCEQEEK 19 1 1 Unmodified _RSIAGIDQWLEVFCEQEEK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPJ1;D2CPJ3;D2CPJ4;D2CPJ5;D2CPJ9;D2CPK5;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 779.9098 3 779.710842 2336.1107 72387.47 1.3176 0.0010274 0.13185 0.00010281 1.4495 0.0011302 780.378981219809 786.052499983491 134.29 0.14349 134.29 134.2 134.35 0 25 6 7 0 0 0 0.026351 1 81946 20.446 17.348 1 1.3424 1.1121 0 3874900 1890200 1984700 30061 118;1184 11397 11706 46874 46874 RSIQEELQQLR 11 0 2 Unmodified _RSIQEELQQLR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.9322 3 467.259918 1398.75793 87728.27 0.24723 0.00011552 -0.23596 -0.00011025 0.011269 5.2657E-06 467.259202598079 473.932127266476 78.836 0.71533 78.836 78.618 79.333 0 86 41 6 0 0 0 0.041474 1 42406 21.656 20.701 1 2.0623 1.8838 0 2104100 718970 1385200 30062 1754 11398 11707 46875 46875 RSIQFVDWCPTGFK 14 1 1 Unmodified _RSIQFVDWCPTGFK_ 0 0 1 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;P68366 B3KT06;P68366 B3KT06 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.9634 3 580.95573 1739.84536 78745.58 0.6908 0.00040132 -0.3802 -0.00022088 0.31059 0.00018044 581.289589273065 586.963132853884 110.25 0.37447 110.25 110.1 110.48 0 65 19 5 0 0 0 0.022162 1 63691 22.154 22.154 1 1.2086 1.0041 0 3686400 1712700 1973700 30063 922;1659 11399 11708 46876 46876 RSLDPLGSEEEAEASEDDSLHLLGGGGR 28 0 2 Unmodified _RSLDPLGSEEEAEASEDDSLHLLGGGGR_ 0 0 1 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.1008 4 724.844336 2895.34824 71610.45 0.84689 0.00061386 0.67643 0.00049031 1.5233 0.0011042 725.095284212764 730.099445919562 108.34 0.37665 108.34 108.13 108.51 0 80 17 8 0 0 0 2.7319E-19 1 62186 76.899 76.899 1 2.8542 2.4925 0 4583600 856940 3726700 30064 1756 11400 11709 46877 46877 RSPSVSSPEPAEK 13 1 1 Unmodified _RSPSVSSPEPAEK_ 0 0 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.8596 2 685.849155 1369.68376 NaN NaN NaN NaN NaN NaN NaN NaN NaN 19.289 1 19.289 18.789 19.789 0 0 0 0 0.017405 1 5752 57.348 25.854 1 30065 619 11401 11710 46878 46878 RSQAGVSSGAPPGR 14 0 2 Unmodified _RSQAGVSSGAPPGR_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.7549 3 442.900613 1325.68001 NaN NaN NaN 0.65504 0.00029012 NaN NaN NaN NaN 15.554 0.18365 15.554 15.484 15.668 -9.5367E-07 0 0 0 0.027848 1 3158 30.483 24.45 1 NaN NaN 0 501410 501410 0 30066 186;1747 11402 11711 46879 46879 RSSPAAFINPPIGTVTPALK 20 1 1 Unmodified _RSSPAAFINPPIGTVTPALK_ 0 0 1 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DSH9;Q6R954;F8WEE2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.7288 3 679.72123 2036.14186 74243.39 0.88028 0.00059835 -0.33827 -0.00022993 0.54202 0.00036842 680.055259621329 685.728518126591 115.18 0.42334 115.18 114.95 115.37 -7.6294E-06 87 18 7 0 0 0 0.015057 1 67407 19.722 19.722 1 0.76073 0.63184 0 3707900 1914400 1793400 30067 1063 11403 11712 46880 46880 RSSPAAFINPPIGTVTPALK 20 1 1 Unmodified _RSSPAAFINPPIGTVTPALK_ 0 0 1 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DSH9;Q6R954;F8WEE2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.0558 3 679.72123 2036.14186 74779.18 0.72172 0.00049057 -0.055546 -3.7756E-05 0.66617 0.00045281 680.055113727458 685.728988371662 114.91 0.3578 114.91 114.71 115.07 0 95 16 8 0 0 0 0.00038368 2 66300 34.689 34.689 1 0.87805 0.73966 0 4096300 1867000 2229300 30068 1063 11403 11712 46881;46882 46881 RSTTLDAGNIK 11 1 1 Unmodified _RSTTLDAGNIK_ 0 0 1 O75400;B4DPY2 O75400 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.3222 2 588.322576 1174.6306 79072.54 0.3042 0.00017897 -0.10823 -6.3673E-05 0.19598 0.0001153 588.322642021697 597.333827862385 24.075 0.28964 24.075 23.958 24.248 0 39 11 6 0 0 0 0.014605 1 9887 50.292 17.452 1 1.3381 1.4871 0 10469000 4721800 5746800 30069 1404 11404 11713 46883 46883 RSTVAQLVK 9 1 1 Unmodified _RSTVAQLVK_ 0 0 1 V9HW26;P25705;K7ENJ4 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.3216 2 501.308741 1000.60293 84511.03 0.8944 0.00044837 0.398 0.00019952 1.2924 0.00064789 501.309004033434 510.320023533135 26.867 0.22343 26.867 26.745 26.968 -1.9073E-06 35 10 6 0 0 0 0.038702 1 12250 48.794 18.54 1 1.3411 1.5093 0 13535000 5147500 8387800 30070 1518 11405 11714 46884 46884 RSVENQESVEIINDLK 16 1 1 Unmodified _RSVENQESVEIINDLK_ 0 0 1 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.0014 3 624.993566 1871.95887 NaN NaN NaN 0.3827 0.00023919 NaN NaN NaN NaN 90.437 0.60339 90.437 90.129 90.732 -7.6294E-06 0 0 0 6.2815E-07 1 50103 85.636 81.795 1 NaN NaN 0 11796000 0 11796000 30071 1945 11406 11715 46885 46885 RSVYIESR 8 0 2 Unmodified _RSVYIESR_ 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.2755 2 505.274898 1008.53524 84428.48 0.28415 0.00014357 -0.12104 -6.1156E-05 0.16311 8.2418E-05 505.27512166547 515.282462793418 21.016 0.45909 21.016 20.871 21.33 0 79 21 6 0 0 0 0.0087886 1 7364 91.069 37.514 1 0.6633 0.72006 0 28964000 17811000 11153000 30072 1421 11407 11716 46886 46886 RSVYIESR 8 0 2 Unmodified _RSVYIESR_ 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.2752 2 505.274898 1008.53524 85116.53 0.46377 0.00023433 0.17256 8.7193E-05 0.63634 0.00032153 505.274946455071 515.283253789948 20.581 0.33714 20.581 20.417 20.754 1.9073E-06 38 10 5 0 0 0 0.0022807 2 6866 109.71 56.16 1 0.69071 0.78718 0 40420000 23304000 17117000 30073 1421 11407 11716 46887;46888 46888 RTAAENDFVTLK 12 1 1 Unmodified _RTAAENDFVTLK_ 0 0 1 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.8613 2 682.862066 1363.70958 NaN NaN NaN -0.36737 -0.00025086 NaN NaN NaN NaN 49.546 0.33316 49.546 49.414 49.747 -3.8147E-06 0 0 0 1.351E-05 1 27209 91.313 43.49 1 NaN NaN 0 56755000 56755000 0 + 30074 1166 11408 11717 46889 46889 RTAITTPNFK 10 1 1 Unmodified _RTAITTPNFK_ 0 0 1 Q9BXS6;A8K4B4;H0YMD2 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.8247 2 574.824755 1147.63496 NaN NaN NaN -0.83815 -0.00048179 NaN NaN NaN NaN 38.268 0.37596 38.268 38.032 38.408 -3.8147E-06 0 0 0 0.015846 1 20088 57.59 30.286 1 NaN NaN 0 22304000 22304000 0 30075 2014 11409 11718 46890 46890 RTAQEVETYR 10 0 2 Unmodified _RTAQEVETYR_ 0 0 1 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3KRX8;J3QR02;C1IK54 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.8253 2 626.817658 1251.62076 NaN NaN NaN -1.1087 -0.00069497 NaN NaN NaN NaN 19.529 0.35418 19.529 19.262 19.616 0 0 0 0 0.0058525 2 6092 67.726 45.64 1 NaN NaN 0 9781600 0 9781600 30076 1009 11410 11719 46891;46892 46891 RTAQEVETYR 10 0 2 Unmodified _RTAQEVETYR_ 0 0 1 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3KRX8;J3QR02;C1IK54 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8182 2 626.817658 1251.62076 79741.98 0.1613 0.00010111 0.34949 0.00021907 0.5108 0.00032018 626.817711656516 636.826121415342 19.178 0.19268 19.178 19.089 19.282 -1.9073E-06 25 6 6 0 0 0 0.0043209 1 5653 77.379 26.772 1 1.4523 1.656 0 41260000 16668000 24592000 30077 1009 11410 11719 46893 46893 RTDDIPVWDQEFLK 14 1 1 Unmodified _RTDDIPVWDQEFLK_ 0 0 1 E5RJR5;P63208;E5RGM3;E7ERH2;F8W8N3 E5RJR5 E5RJR5 SKP1 S-phase kinase-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.9722 3 587.96506 1760.87335 77579.23 0.45637 0.00026833 0.36571 0.00021502 0.82208 0.00048336 588.29915249354 593.973574159861 101.71 0.27373 101.71 101.56 101.84 7.6294E-06 59 20 4 0 0 0 0.023422 1 64064 21.841 17.739 1 0.71549 0.7909 0 7185800 4247800 2938000 30078 1215 11411 11720 46894 46894 RTDEAAFQK 9 1 1 Unmodified _RTDEAAFQK_ 0 0 1 P26447;Q5Q9Z3 P26447 P26447 S100A4 Protein S100-A4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.281 2 533.269813 1064.52507 NaN NaN NaN -0.010632 -5.6697E-06 NaN NaN NaN NaN 17.502 0.3763 17.502 17.307 17.683 0 0 0 0 0.00461 1 4641 76.221 35.192 1 NaN NaN 0 7434600 0 7434600 30079 1520 11412 11721 46895 46895 RTDEAAFQK 9 1 1 Unmodified _RTDEAAFQK_ 0 0 1 P26447;Q5Q9Z3 P26447 P26447 S100A4 Protein S100-A4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.2696 2 533.269813 1064.52507 NaN NaN NaN NaN NaN NaN NaN NaN NaN 17.49 1 17.49 16.99 17.99 0 0 0 0 0.0024427 1 4640 100.02 52.168 1 30080 1520 11412 11721 46896 46896 RTELFIAAEGIHTGQFVYCGK 21 1 1 Unmodified _RTELFIAAEGIHTGQFVYCGK_ 0 0 1 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 800.0738 3 799.738843 2396.1947 68201.96 0.72398 0.00057899 -0.30538 -0.00024423 0.4186 0.00033477 800.072965985467 806.080600347627 107.45 0.48342 107.45 107.18 107.66 0 134 28 8 0 0 0 0.0011797 3 61541 27.52 27.52 1 0.91283 0.77968 0 9961500 5841400 4120100 30081 1653 11413 11722 46897;46898;46899 46898 RTELFIAAEGIHTGQFVYCGK 21 1 1 Unmodified _RTELFIAAEGIHTGQFVYCGK_ 0 0 1 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.0817 3 799.738843 2396.1947 67075.94 0.6021 0.00048152 -0.26161 -0.00020922 0.34049 0.0002723 800.073185790549 806.080618545674 107.09 0.45813 107.09 106.88 107.34 7.6294E-06 161 28 9 0 0 0 0.034243 2 60399 12.387 12.387 1 0.92359 0.77844 0 8363600 4220900 4142700 30082 1653 11413 11722 46900;46901 46901 RTEMENEFVLIK 12 1 1 Oxidation (M) _RTEM(ox)ENEFVLIK_ RTEM(1)ENEFVLIK RTEM(84.31)ENEFVLIK 0 1 1 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.9016 2 762.889966 1523.76538 68356.07 0.51168 0.00039036 0.10317 7.8708E-05 0.61485 0.00046906 762.890227327033 771.901269306166 68.468 1.3904 68.468 67.894 69.284 0 845 122 12 0 0 0 0.00052461 3 39831 84.31 84.31 1 1.3506 1.6264 0 102750000 45975000 56772000 + 30083 1156 11414 11723 46902;46903;46904 46903 867 RTEMENEFVLIK 12 1 1 Oxidation (M) _RTEM(ox)ENEFVLIK_ RTEM(1)ENEFVLIK RTEM(68.28)ENEFVLIK 0 1 1 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.9286 3 508.929069 1523.76538 83874.76 0.29632 0.00015081 0.044734 2.2766E-05 0.34106 0.00017357 508.92906857776 514.936563716931 68.449 0.93407 68.449 68.113 69.047 0 297 82 6 0 0 0 0.00021265 1 39596 68.277 68.277 1 1.3807 1.5865 0 27030000 12187000 14843000 + 30084 1156 11414 11723 46905 46905 867 RTEMENEFVLIK 12 1 1 Oxidation (M) _RTEM(ox)ENEFVLIK_ RTEM(1)ENEFVLIK RTEM(59.43)ENEFVLIK 0 1 1 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.902 2 762.889966 1523.76538 68670.19 0.53247 0.00040621 -0.34 -0.00025939 0.19246 0.00014683 762.889823975427 771.901107702668 66.166 1.09 66.166 65.611 66.701 0 527 91 10 0 0 0 0.00487 2 39342 59.426 59.426 1 1.3466 1.5955 0 236390000 96351000 140040000 + 30085 1156 11414 11723 46906;46907 46907 867 RTEMENEFVLIK 12 1 1 Oxidation (M) _RTEM(ox)ENEFVLIK_ RTEM(1)ENEFVLIK RTEM(92.86)ENEFVLIK 0 1 1 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.9293 3 508.929069 1523.76538 83305.59 0.2989 0.00015212 0.060182 3.0628E-05 0.35908 0.00018275 508.92922003002 514.936421140501 66.157 0.88343 66.157 65.705 66.588 0 348 70 8 0 0 0 5.1406E-05 2 39034 92.856 92.856 1 1.1651 1.3593 0 46125000 18964000 27160000 + 30086 1156 11414 11723 46908;46909 46909 867 RTEMENEFVLIK 12 1 1 Oxidation (M) _RTEM(ox)ENEFVLIK_ RTEM(1)ENEFVLIK RTEM(41.54)ENEFVLIK 0 1 1 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.9006 2 762.889966 1523.76538 NaN NaN NaN -0.07639 -5.8277E-05 NaN NaN NaN NaN 77.195 0.6597 77.195 76.921 77.581 0 0 0 0 0.028917 1 41190 41.54 29.326 1 NaN NaN 0 2457200 0 2457200 + 30087 1156 11414 11723 46910 46910 867 RTEMENEFVLIK 12 1 1 Unmodified _RTEMENEFVLIK_ 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.9068 2 754.892509 1507.77046 NaN NaN NaN 0.18165 0.00013712 NaN NaN NaN NaN 92.74 0.48783 92.74 92.43 92.918 0 0 0 0 0.05321 1 51647 41.54 21.236 1 NaN NaN 0 2053700 0 2053700 + 30088 1156 11414 11724 46911 46911 RTEQEEDEELLTESSK 16 1 1 Unmodified _RTEQEEDEELLTESSK_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.9561 2 961.944906 1921.87526 62260.26 0.079097 7.6087E-05 0.638 0.00061373 0.7171 0.00068981 961.944981811532 970.956923480463 43.29 0.70694 43.29 42.961 43.667 0 135 56 5 0 0 0 0.0011874 2 22985 56.139 56.139 1 2.3135 2.5771 0 20068000 6167100 13901000 30089 1391 11415 11725 46912;46913 46912 RTEQEEDEELLTESSK 16 1 1 Unmodified _RTEQEEDEELLTESSK_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.9674 3 641.632363 1921.87526 NaN NaN NaN 0.15727 0.00010091 NaN NaN NaN NaN 43.338 0.62417 43.338 42.985 43.609 0 0 0 0 2.3042E-05 1 23100 76.768 71.664 1 NaN NaN 0 11609000 11609000 0 30090 1391 11415 11725 46914 46914 RTEQEEDEELLTESSK 16 1 1 Unmodified _RTEQEEDEELLTESSK_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.6323 3 641.632363 1921.87526 75302.48 0.70778 0.00045413 -0.10805 -6.9327E-05 0.59973 0.0003848 641.966856374966 647.639730886552 41.975 0.80702 41.975 41.521 42.328 0 385 72 8 0 0 0 8.5418E-08 3 22560 99.044 97.127 1 2.4684 2.8892 0 52825000 18859000 33965000 30091 1391 11415 11725 46915;46916;46917 46916 RTEQEEDEELLTESSK 16 1 1 Unmodified _RTEQEEDEELLTESSK_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.9568 2 961.944906 1921.87526 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.647 1 41.647 41.147 42.147 -3.8147E-06 0 0 0 7.8541E-18 1 22399 127.36 99.494 1 30092 1391 11415 11725 46918 46918 RTEQEEDEELLTESSK 16 1 1 Unmodified _RTEQEEDEELLTESSK_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 970.9559 2 961.944906 1921.87526 60863.04 -0.16579 -0.00015948 0.36576 0.00035184 0.19997 0.00019236 962.446190815814 970.95667548261 50.429 0.53934 50.429 50.2 50.74 0 197 42 7 0 0 0 0.010476 1 24776 30.998 28.131 1 5.9156 4.8494 0 4655900 661860 3994000 30093 1391 11415 11725 46919 46919 RTEQEEDEELLTESSK 16 1 1 Unmodified _RTEQEEDEELLTESSK_ 0 0 1 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.975 3 641.632363 1921.87526 NaN NaN NaN -0.010644 -6.8296E-06 NaN NaN NaN NaN 50.422 0.94056 50.422 50.154 51.095 0 0 0 0 6.0873E-13 1 24657 106.19 106.19 1 NaN NaN 0 18020000 0 18020000 30094 1391 11415 11725 46920 46920 RTFDETVSTYVPLAQQVEDFHK 22 1 1 Unmodified _RTFDETVSTYVPLAQQVEDFHK_ 0 0 1 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.8326 4 653.326322 2609.27618 74283.34 0.88444 0.00057782 -0.18798 -0.00012281 0.69646 0.00045501 653.325791869154 657.832051154819 115.92 0.28443 115.92 115.73 116.01 0 46 13 5 0 0 0 0.020435 2 67104 16.593 13.437 1 1.4233 1.1994 0 4028000 1443100 2584900 30095 1837 11416 11726 46921;46922 46922 RTGAIVDVPVGEELLGR 17 0 2 Unmodified _RTGAIVDVPVGEELLGR_ 0 0 1 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.0085 3 594.335375 1779.9843 81977.23 0.62016 0.00036858 -1.0292 -0.00061166 -0.40899 -0.00024308 594.332942523946 601.007806286029 102.9 0.66884 102.9 102.62 103.29 0 110 57 4 0 0 0 0.00035622 1 63382 40.962 36.791 1 1.4405 1.6107 0 7191000 2682200 4508700 30096 1518 11417 11727 46923 46923 RTGAIVDVPVGEELLGR 17 0 2 Unmodified _RTGAIVDVPVGEELLGR_ 0 0 1 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.9722 3 594.335375 1779.9843 80694.02 0.74288 0.00044152 0.023562 1.4004E-05 0.76644 0.00045552 594.669587405024 601.007592618669 101.64 0.42918 101.64 101.38 101.81 0 82 33 4 0 0 0 0.040406 1 64064 19.036 19.036 1 0.92696 0.92367 0 8150500 3055700 5094800 30097 1518 11417 11727 46924 46924 RTGAIVDVPVGEELLGR 17 0 2 Unmodified _RTGAIVDVPVGEELLGR_ 0 0 1 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.3362 3 594.335375 1779.9843 79824.75 0.68668 0.00040812 0.81177 0.00048247 1.4985 0.00089058 594.670188600179 601.00837591518 113.53 0.51193 113.53 113.3 113.81 -7.6294E-06 63 24 4 0 0 0 0.037017 1 65254 15.422 11.453 1 0.70722 0.6387 0 2880500 1384400 1496100 30098 1518 11417 11727 46925 46925 RTIAQDYGVLK 11 1 1 Unmodified _RTIAQDYGVLK_ 0 0 1 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.368 2 632.356419 1262.69829 75560.86 0.84237 0.00053268 0.52016 0.00032892 1.3625 0.0008616 632.357237069386 641.367841374858 49.378 1.0949 49.378 49.119 50.213 0 254 82 8 0 0 0 0.0087828 1 27084 56.563 21.339 1 2.6562 3.1949 0 85858000 24312000 61546000 30099 1690 11418 11728 46926 46926 RTIAQDYGVLK 11 1 1 Unmodified _RTIAQDYGVLK_ 0 0 1 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3676 2 632.356419 1262.69829 74475.91 0.64139 0.00040559 -0.035535 -2.2471E-05 0.60586 0.00038312 632.356375593158 641.367521106594 47.47 0.53374 47.47 47.289 47.823 0 167 37 7 0 0 0 0.0028804 1 26315 65.347 30.123 1 3.2579 3.8617 0 251540000 67558000 183980000 30100 1690 11418 11728 46927 46927 RTIAQDYGVLK 11 1 1 Unmodified _RTIAQDYGVLK_ 0 0 1 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3565 2 632.356419 1262.69829 75692.73 0.60587 0.00038313 -0.061255 -3.8735E-05 0.54462 0.00034439 632.356352702596 641.367555348796 56.778 0.51679 56.778 56.545 57.062 0 188 34 8 0 0 0 0.011457 2 28694 53.683 18.459 1 2.7559 2.3871 0 15748000 4189400 11558000 30101 1690 11418 11728 46928;46929 46929 RTIAQDYGVLK 11 1 1 Unmodified _RTIAQDYGVLK_ 0 0 1 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 632.3563 2 632.356419 1262.69829 76321.5 0.70204 0.00044394 -0.30215 -0.00019107 0.39989 0.00025287 632.35599714869 641.367490251115 57.004 0.58748 57.004 56.765 57.352 0 202 38 8 0 0 0 0.011457 2 28131 53.683 16.703 1 2.9699 2.5165 0 15474000 3962900 11511000 30102 1690 11418 11728 46930;46931 46931 RTIQFVDWCPTGFK 14 1 1 Unmodified _RTIQFVDWCPTGFK_ 0 0 1 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 Q53GA7;Q71U36 Q71U36 TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.6281 3 585.627613 1753.86101 79525.18 0.7992 0.00046803 0.18596 0.0001089 0.98516 0.00057694 585.627514264986 591.635132843603 111.39 0.43986 111.39 111.16 111.6 0 89 20 6 0 0 0 0.0026264 1 64529 36.638 36.246 1 0.8246 0.70194 0 2922500 1408200 1514300 30103 1257;1869 11419 11729 46932 46932 RTIQFVDWCPTGFK 14 1 1 Unmodified _RTIQFVDWCPTGFK_ 0 0 1 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 Q53GA7;Q71U36 Q71U36 TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.9622 3 585.627613 1753.86101 80492.86 0.61008 0.00035728 0.047129 2.76E-05 0.65721 0.00038488 585.627713083098 591.6352846239 111.09 0.50157 111.09 110.88 111.38 0 82 24 5 0 0 0 0.0097782 1 63403 28.58 28.58 1 0.86334 0.73476 0 3123400 1573900 1549500 30104 1257;1869 11419 11729 46933 46933 RTIVEELLADSEFR 14 0 2 Unmodified _RTIVEELLADSEFR_ 0 0 1 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.9656 3 559.96506 1676.87335 81002.88 0.98412 0.00055108 -0.26663 -0.0001493 0.7175 0.00040177 559.964839870423 566.637155718047 119.34 1.0374 119.34 118.85 119.88 0 278 67 6 0 0 0 3.7958E-05 3 77025 62.377 62.377 1 0.82229 0.90404 0 12123000 5491600 6630900 30105 1813 11420 11730 46934;46935;46936 46936 RTIVEELLADSEFR 14 0 2 Unmodified _RTIVEELLADSEFR_ 0 0 1 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.967 3 559.96506 1676.87335 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.9 1 118.9 118.4 119.4 0 0 0 0 0.038559 1 76385 26.781 20.619 1 30106 1813 11420 11730 46937 46937 RTIVEELLADSEFR 14 0 2 Unmodified _RTIVEELLADSEFR_ 0 0 1 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.972 3 559.96506 1676.87335 81437.88 0.69093 0.00038689 -0.085226 -4.7723E-05 0.6057 0.00033917 559.964968238618 566.971583067206 118.16 0.97691 118.16 117.74 118.72 0 317 63 7 0 0 0 4.9201E-05 2 77506 61.444 61.444 1 0.84927 0.9456 0 24827000 14990000 9837400 30107 1813 11420 11730 46938;46939 46939 RTIVEELLADSEFR 14 0 2 Unmodified _RTIVEELLADSEFR_ 0 0 1 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.6372 3 559.96506 1676.87335 81195.38 0.70002 0.00039199 -0.28211 -0.00015797 0.41791 0.00023402 559.964888730649 566.637055226515 129.37 0.44229 129.37 129.14 129.58 0 114 20 8 0 0 0 4.4564E-05 2 78205 69.403 69.403 1 1.423 1.2112 0 7436700 3095300 4341400 30108 1813 11420 11730 46940;46941 46941 RTIVEELLADSEFR 14 0 2 Unmodified _RTIVEELLADSEFR_ 0 0 1 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.6375 3 559.96506 1676.87335 80831.81 0.90141 0.00050476 -0.57835 -0.00032385 0.32306 0.0001809 559.964656144027 566.636939662108 129.19 0.4946 129.19 128.86 129.36 0 64 20 5 0 0 0 2.9323E-05 1 77132 69.594 69.594 1 1.5134 1.3726 0 5569400 2033800 3535600 30109 1813 11420 11730 46942 46942 RTLAEPPAK 9 1 1 Unmodified _RTLAEPPAK_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.7876 2 491.787641 981.56073 85266.6 0.0071007 3.4921E-06 0.058395 2.8718E-05 0.065496 3.221E-05 491.787506474749 500.79896850055 19.088 0.44114 19.088 18.84 19.282 0 154 31 6 0 0 0 0.0058271 3 5724 71.692 44.73 1 0.95592 1.1447 0 57013000 29365000 27648000 30110 2038 11421 11731 46943;46944;46945 46943 RTLAEPPAK 9 1 1 Unmodified _RTLAEPPAK_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.7869 2 491.787641 981.56073 84583.69 0.072073 3.5444E-05 0.10415 5.1221E-05 0.17623 8.6666E-05 491.787557715505 500.798960509694 19.082 0.27645 19.082 18.975 19.252 0 63 13 8 0 0 0 0.00081413 2 5542 98.582 58.58 1 1.0565 1.247 0 127530000 58258000 69277000 30111 2038 11421 11731 46946;46947 46947 RTLAEPPAK 9 1 1 Unmodified _RTLAEPPAK_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.7992 2 491.787641 981.56073 84648.63 -0.24626 -0.00012111 0.69845 0.00034349 0.45219 0.00022238 491.787906203603 500.799158416501 20.096 0.32649 20.096 19.907 20.234 0 95 15 8 0 0 0 0.036091 2 5541 49.418 29.631 1 1.4126 1.2236 0 15811000 6976700 8834200 30112 2038 11421 11731 46948;46949 46949 RTLAEPPAK 9 1 1 Unmodified _RTLAEPPAK_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.7993 2 491.787641 981.56073 83781.76 -0.30972 -0.00015231 0.43298 0.00021293 0.12326 6.0618E-05 491.787730157046 500.799077971137 19.908 0.39397 19.908 19.728 20.122 0 98 17 8 0 0 0 0.05391 1 4954 45.161 21.006 1 1.4322 1.2137 0 15753000 6590300 9163100 30113 2038 11421 11731 46950 46950 RTLLIDELNK 10 1 1 Unmodified _RTLLIDELNK_ 0 0 1 B4DSL6;A8K5D9;A0A024RA49;Q9NQW6;H7C1K5 B4DSL6 B4DSL6 ANLN Actin-binding protein anillin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8691 2 607.858795 1213.70304 NaN NaN NaN -0.66355 -0.00040334 NaN NaN NaN NaN 65.2 0.33986 65.2 64.996 65.336 -7.6294E-06 0 0 0 0.0097069 1 38458 63.816 12.47 1 NaN NaN 0 3400400 0 3400400 30114 294 11422 11732 46951 46951 RTLTQIK 7 1 1 Unmodified _RTLTQIK_ 0 0 1 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.2716 2 430.271627 858.528701 90631.38 -0.21361 -9.1911E-05 0.18754 8.0693E-05 -0.026071 -1.1217E-05 430.271611945234 439.282840746592 20.333 0.58651 20.333 20.176 20.763 0 112 24 7 0 0 0 0.03066 1 6768 96.19 26.807 1 0.91828 1.1089 0 160510000 86093000 74418000 30115 1813 11423 11733 46952 46952 RTLTQIK 7 1 1 Unmodified _RTLTQIK_ 0 0 1 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 430.2713 2 430.271627 858.528701 90669.88 -0.54866 -0.00023607 0.4642 0.00019973 -0.084468 -3.6344E-05 430.271791689185 439.282989498045 21.392 0.47093 21.392 21.267 21.738 -1.9073E-06 71 15 8 0 0 0 0.02829 1 6434 97.602 15.297 1 1.4215 1.2553 0 41625000 17420000 24205000 30116 1813 11423 11733 46953 46953 RTNAENEFVTIK 12 1 1 Unmodified _RTNAENEFVTIK_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.3747 2 711.372798 1420.73104 NaN NaN NaN -0.1799 -0.00012798 NaN NaN NaN NaN 46.743 1.1129 46.743 46.324 47.437 0 0 0 0 1.0739E-08 1 25115 115.29 72.204 1 NaN NaN 0 432050000 432050000 0 + 30117 1308;1309 11424 11734 46954 46954 RTNAENEFVTIK 12 1 1 Unmodified _RTNAENEFVTIK_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3751 2 711.372798 1420.73104 NaN NaN NaN -0.068155 -4.8484E-05 NaN NaN NaN NaN 44.542 0.87836 44.542 44.326 45.204 0 0 0 0 9.719E-09 1 24511 115.57 77.271 1 NaN NaN 0 359100000 359100000 0 + 30118 1308;1309 11424 11734 46955 46955 RTNIIPVLEDAR 12 0 2 Unmodified _RTNIIPVLEDAR_ 0 0 1 A6NHQ2 A6NHQ2 A6NHQ2 FBLL1 rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.91 2 698.898983 1395.78341 74187.02 0.72382 0.00050587 0.42022 0.00029369 1.144 0.00079956 698.898813058057 708.908053308738 75.034 0.74564 75.034 74.726 75.472 0 303 60 7 0 0 0 0.0062375 2 43970 55.314 0 1 0.76372 0.83072 0 55065000 30322000 24743000 30119 683 11425 11735 46956;46957 46957 RTNIIPVLEDAR 12 0 2 Unmodified _RTNIIPVLEDAR_ 0 0 1 A6NHQ2 A6NHQ2 A6NHQ2 FBLL1 rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.8997 2 698.898983 1395.78341 72694.56 0.88278 0.00061698 -0.37171 -0.00025979 0.51107 0.00035719 698.898735138438 708.907084038414 72.954 0.76041 72.954 72.623 73.384 7.6294E-06 284 63 6 0 0 0 0.00034538 1 43763 80.014 0 1 0.74752 0.85958 0 57300000 35101000 22199000 30120 683 11425 11735 46958 46958 RTNSTFNQVVLK 12 1 1 Unmodified _RTNSTFNQVVLK_ 0 0 1 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.8914 2 703.891158 1405.76776 74765.01 0.53152 0.00037413 0.042002 2.9565E-05 0.57352 0.0004037 703.890946007214 712.902430865505 45.202 0.36208 45.202 45.006 45.368 -3.8147E-06 84 31 5 0 0 0 0.005521 1 24762 56.404 35.627 1 0.83732 0.9366 0 11944000 7329000 4615200 30121 16 11426 11736 46959 46959 RTPDLPEEEYVK 12 1 1 Unmodified _RTPDLPEEEYVK_ 0 0 1 Q9NYB0 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3737 2 738.372463 1474.73037 72388.51 0.36992 0.00027314 0.13085 9.6617E-05 0.50077 0.00036976 738.372408794867 747.382981289162 52.865 0.28339 52.865 52.693 52.976 0 57 19 4 0 0 0 0.0095438 1 29407 50.284 42.397 1 1.3974 1.5189 0 15716000 7748200 7967400 30122 2082 11427 11737 46960 46960 RTPNNVVSTPAPSPDASQLASSLSSQK 27 1 1 Unmodified _RTPNNVVSTPAPSPDASQLASSLSSQK_ 0 0 1 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 920.1442 3 913.801776 2738.3835 NaN NaN NaN 1.2117 0.0011073 NaN NaN NaN NaN 82.293 0.25201 82.293 82.096 82.348 0 0 0 0 0.0016169 1 49050 30.206 23.174 1 NaN NaN 0 3746000 0 3746000 30123 640 11428 11738 46961 46961 RTPSATFQQATK 12 1 1 Unmodified _RTPSATFQQATK_ 0 0 1 Q03164;E9PR05;Q9UPD0;Q9Y6P1 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3544 2 668.354408 1334.69426 73999.77 0.82236 0.00054963 -0.3499 -0.00023386 0.47246 0.00031577 668.354115672045 677.365350658633 22.72 0.34415 22.72 22.543 22.887 0 89 20 7 0 0 0 0.0022147 2 8703 61.435 47.559 1 0.82508 0.93935 0 24757000 12623000 12134000 30124 1680 11429 11739 46962;46963 46962 RTPSATFQQATK 12 1 1 Unmodified _RTPSATFQQATK_ 0 0 1 Q03164;E9PR05;Q9UPD0;Q9Y6P1 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3548 2 668.354408 1334.69426 74084.28 0.38933 0.00026021 0.0080233 5.3624E-06 0.39735 0.00026557 668.35435177845 677.365567312605 22.202 0.30442 22.202 22.084 22.388 0 67 14 8 0 0 0 0.00010133 2 8229 98.105 74.254 1 0.80687 0.93237 0 31376000 15931000 15444000 30125 1680 11429 11739 46964;46965 46965 RTPSATFQQATK 12 1 1 Unmodified _RTPSATFQQATK_ 0 0 1 Q03164;E9PR05;Q9UPD0;Q9Y6P1 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 677.3661 2 668.354408 1334.69426 73686.98 0.55616 0.00037171 -0.11175 -7.4686E-05 0.44442 0.00029703 668.354159859245 677.365614362142 24.835 0.57886 24.835 24.503 25.081 0 142 30 9 0 0 0 0.020228 1 8809 45.257 32.681 1 1.9705 1.6868 0 10435000 3391000 7044400 30126 1680 11429 11739 46966 46966 RTPSATFQQATK 12 1 1 Unmodified _RTPSATFQQATK_ 0 0 1 Q03164;E9PR05;Q9UPD0;Q9Y6P1 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 451.9128 3 445.905364 1334.69426 90683 0.074279 3.3122E-05 0.30244 0.00013486 0.37672 0.00016798 445.905222886761 451.912961750882 24.837 0.35881 24.837 24.665 25.023 0 70 19 5 0 0 0 0.019828 1 8858 19.199 16.96 1 1.5951 1.4644 0 1277200 538710 738460 30127 1680 11429 11739 46967 46967 RTPSATFQQATK 12 1 1 Unmodified _RTPSATFQQATK_ 0 0 1 Q03164;E9PR05;Q9UPD0;Q9Y6P1 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.3542 2 668.354408 1334.69426 75219.7 0.56608 0.00037834 -0.068142 -4.5543E-05 0.49794 0.0003328 668.354288403965 677.365573662181 24.701 0.47388 24.701 24.508 24.982 0 125 22 8 0 0 0 0.013724 2 8268 47.991 47.991 1 1.8565 1.5615 0 7435900 2451900 4983900 30128 1680 11429 11739 46968;46969 46969 RTQIVTEIISEIR 13 0 2 Unmodified _RTQIVTEIISEIR_ 0 0 1 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.6427 3 519.970145 1556.88861 86514.58 0.52858 0.00027485 -0.024233 -1.26E-05 0.50435 0.00026225 519.970068384242 526.64224327792 106.72 1.0017 106.72 106.22 107.22 0 185 74 5 0 0 0 0.00016914 1 66184 60.937 60.937 1 0.86085 0.9439 0 12625000 4973700 7651200 30129 1995;1289 11430 11740 46970 46970 RTQIVTEIISEIR 13 0 2 Unmodified _RTQIVTEIISEIR_ 0 0 1 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.6424 3 519.970145 1556.88861 84989.54 0.58818 0.00030584 0.24808 0.000129 0.83627 0.00043483 519.970169671955 526.642440066736 104.74 0.8017 104.74 104.56 105.36 -7.6294E-06 163 63 5 0 0 0 0.00029959 1 66399 58.817 58.817 1 0.86554 0.92262 0 15354000 8613400 6740300 30130 1995;1289 11430 11740 46971 46971 RTQIVTEIISEIR 13 0 2 Unmodified _RTQIVTEIISEIR_ 0 0 1 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.6425 3 519.970145 1556.88861 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.56 1 104.56 104.06 105.06 0 0 0 0 0.0066644 1 66271 51.004 42.184 1 30131 1995;1289 11430 11740 46972 46972 RTQIVTEIISEIR 13 0 2 Unmodified _RTQIVTEIISEIR_ 0 0 1 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.6433 3 519.970145 1556.88861 NaN NaN NaN 0.64561 0.0003357 NaN NaN NaN NaN 115.86 0.32153 115.86 115.75 116.07 0 0 0 0 0.00067298 1 67983 68.972 49.394 1 NaN NaN 0 5175200 0 5175200 30132 1995;1289 11430 11740 46973 46973 RTQIVTEIISEIR 13 0 2 Unmodified _RTQIVTEIISEIR_ 0 0 1 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 526.643 3 519.970145 1556.88861 NaN NaN NaN 0.26804 0.00013937 NaN NaN NaN NaN 115.65 0.3584 115.65 115.41 115.77 0 0 0 0 0.00077125 1 66767 67.136 47.558 1 NaN NaN 0 2259500 0 2259500 30133 1995;1289 11430 11740 46974 46974 RTQIVTEIISEIR 13 0 2 Unmodified _RTQIVTEIISEIR_ 0 0 1 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.9703 3 519.970145 1556.88861 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.58 1 115.58 115.08 116.08 7.6294E-06 0 0 0 0.021422 1 66829 41.743 30.129 1 30134 1995;1289 11430 11740 46975 46975 RTTTFFQFCNADSGTLLCTDVAAR 24 0 2 Unmodified _RTTTFFQFCNADSGTLLCTDVAAR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 925.1058 3 918.098771 2751.27448 62534.99 0.44773 0.00041106 0.28881 0.00026516 0.73654 0.00067622 918.433313609624 925.105823946271 120.29 0.4802 120.29 120.07 120.55 0 162 21 11 0 0 0 4.2248E-06 2 71337 42.791 42.791 1 1.3516 1.1256 0 17247000 7198300 10049000 30135 303 11431 11741 46976;46977 46976 RTTTFFQFCNADSGTLLCTDVAAR 24 0 2 Unmodified _RTTTFFQFCNADSGTLLCTDVAAR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 924.7701 3 918.098771 2751.27448 63026.11 0.65165 0.00059828 0.047197 4.3332E-05 0.69885 0.00064161 918.432892032543 925.105582582866 120.04 0.49228 120.04 119.84 120.34 0 144 21 12 0 0 0 2.868E-12 2 70236 68.895 68.895 1 1.5115 1.3847 0 10657000 4886200 5771000 30136 303 11431 11741 46978;46979 46978 RTVAAPSVFIFPPSDEQLK 19 1 1 Unmodified _RTVAAPSVFIFPPSDEQLK_ 0 0 1 Q0KKI6;V9HW34;Q6PJF2;Q7Z3Y4;Q6PIL8;Q6P5S8;Q6GMX0;Q8TCD0;P01834;S6AWD6;S6AWF4;S6BGE9;S6AWD3;S6C4R6;S6B2A1;S6B2C3;S6B294;S6AWE3;Q569I7 Q0KKI6 Q0KKI6 HEL-213;IGK@;IGKC Ig kappa chain C region ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 701.7154 3 701.380873 2101.12079 NaN NaN NaN 0.87003 0.00061022 NaN NaN NaN NaN 117.78 0.78275 117.78 117.42 118.2 0 0 0 0 0.0076274 1 68687 23.726 15.018 1 NaN NaN 0 820070 820070 0 30137 1439 11432 11742 46980 46980 RVAMIDETR 9 0 2 Oxidation (M) _RVAM(ox)IDETR_ RVAM(1)IDETR RVAM(53.97)IDETR 0 1 1 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.7845 2 553.784773 1105.55499 82570.33 0.56399 0.00031233 -0.30423 -0.00016848 0.25976 0.00014385 553.78456731714 563.79288644917 18.518 0.48431 18.518 18.311 18.795 0 53 21 4 0 0 0 0.037676 1 5296 53.968 33.448 1 1.2927 1.3601 0 14106000 4585000 9521400 30138 1774;1029;1128 11433 11743 46981 46981 811 RVCEEIAIIPSK 12 1 1 Unmodified _RVCEEIAIIPSK_ 0 0 1 H0YN88;A0A075B716;P08708;H0YN73 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.8898 2 707.889769 1413.76499 72643.27 0.50516 0.00035759 -0.37506 -0.0002655 0.1301 9.2094E-05 707.889477564631 716.900819065994 66.674 0.97864 66.674 66.154 67.133 0 431 75 8 0 0 0 0.00017817 2 38384 91.855 91.855 1 0.84088 1.0056 0 54624000 29397000 25227000 30139 396 11434 11744 46982;46983 46983 RVCEEIAIIPSK 12 1 1 Unmodified _RVCEEIAIIPSK_ 0 0 1 H0YN88;A0A075B716;P08708;H0YN73 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.8895 2 707.889769 1413.76499 72718.62 0.59393 0.00042044 -0.6987 -0.0004946 -0.10476 -7.4159E-05 707.889080063664 716.900873348845 64.283 1.802 64.283 62.975 64.778 7.6294E-06 674 161 8 0 0 0 0.0083687 2 37646 56.548 56.548 1 0.63276 0.74383 0 67174000 38352000 28822000 30140 396 11434 11744 46984;46985 46985 RVCEEIAIIPSK 12 1 1 Unmodified _RVCEEIAIIPSK_ 0 0 1 H0YN88;A0A075B716;P08708;H0YN73 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.2696 3 472.262271 1413.76499 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.157 1 64.157 63.657 64.657 0 0 0 0 0.0044294 1 37755 57.136 40.882 1 30141 396 11434 11744 46986 46986 RVCEEIAIIPSK 12 1 1 Unmodified _RVCEEIAIIPSK_ 0 0 1 H0YN88;A0A075B716;P08708;H0YN73 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.8902 2 707.889769 1413.76499 71585.42 0.75279 0.00053289 -0.77695 -0.00055 -0.024162 -1.7104E-05 707.889189005649 716.900717015469 75.047 1.7288 75.047 74.129 75.857 0 392 123 7 0 0 0 0.037983 1 39951 42.802 42.802 1 0.40875 0.35338 0 14327000 9960400 4366200 30142 396 11434 11744 46987 46987 RVDAVIPPYPR 11 0 2 Unmodified _RVDAVIPPYPR_ 0 0 1 CON__Q3ZBS7 CON__Q3ZBS7 CON__Q3ZBS7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.8663 2 641.866954 1281.71936 NaN NaN NaN -0.42021 -0.00026972 NaN NaN NaN NaN 61.854 0.71497 61.854 61.724 62.439 0 0 0 0 0.026807 2 36418 51.268 38.214 1 NaN NaN 0 15585000 15585000 0 + 30143 1173 11435 11745 46988;46989 46989 RVEEDIQQQK 10 1 1 Unmodified _RVEEDIQQQK_ 0 0 1 P15924 P15924 P15924 DSP Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.8308 2 636.830766 1271.64698 77389.04 0.46879 0.00029854 0.34711 0.00022105 0.8159 0.00051959 636.83079725057 645.842279157691 17.03 0.28449 17.03 16.858 17.143 0 38 9 7 0 0 0 9.4864E-08 1 4215 114.5 50.232 1 0.52558 0.5742 0 9308200 6064800 3243400 30144 1486 11436 11746 46990 46990 RVEILNEHR 9 0 2 Unmodified _RVEILNEHR_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 389.2195 3 389.219395 1164.63635 NaN NaN NaN 0.008712 3.3909E-06 NaN NaN NaN NaN 24.282 0.33698 24.282 24.083 24.42 0 0 0 0 0.00037806 1 10060 72.365 63.043 1 NaN NaN 0 16942000 16942000 0 30145 2070 11437 11747 46991 46991 RVEILNEHR 9 0 2 Unmodified _RVEILNEHR_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 395.8915 3 389.219395 1164.63635 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.295 1 24.295 23.795 24.795 1.9073E-06 0 0 0 0.0013207 1 10048 78.655 58.665 1 30146 2070 11437 11747 46992 46992 RVEILNEHR 9 0 2 Unmodified _RVEILNEHR_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.2192 3 389.219395 1164.63635 94259.17 0.32575 0.00012679 -0.68482 -0.00026655 -0.35907 -0.00013976 389.219095568315 395.891364482655 22.347 0.40457 22.347 22.158 22.563 0 69 15 7 0 0 0 0.00036266 2 8352 85.29 77.645 1 0.82224 0.93115 0 31552000 17808000 13744000 30147 2070 11437 11747 46993;46994 46993 RVEILNEHR 9 0 2 Unmodified _RVEILNEHR_ 0 0 1 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 395.8915 3 389.219395 1164.63635 95824.11 0.15909 6.1922E-05 -0.091302 -3.5536E-05 0.067792 2.6386E-05 389.219386572412 395.891474363031 25.111 0.34157 25.111 24.94 25.281 -1.9073E-06 73 16 6 0 0 0 0.050942 1 9081 20.336 20.336 1 1.7132 1.5384 0 3472100 1428700 2043400 30148 2070 11437 11747 46995 46995 RVEILSEGNEVQFIQLAK 18 1 1 Unmodified _RVEILSEGNEVQFIQLAK_ 0 0 1 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8VWY4;F8VWX0;F8W0L1;F8VZ66;F8VV47;F8VVE5;F8VUW9;F8VV39;F8VS54 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.7244 3 691.716144 2072.1266 73704.17 0.34476 0.00023848 0.021362 1.4777E-05 0.36612 0.00025325 692.050157916594 697.723699534319 117.01 0.44793 117.01 116.8 117.25 0 79 17 8 0 0 0 1.1008E-05 1 68860 59.9 50.853 1 1.5625 1.2996 0 6040500 2408400 3632100 30149 68 11438 11748 46996 46996 RVEILSEGNEVQFIQLAK 18 1 1 Unmodified _RVEILSEGNEVQFIQLAK_ 0 0 1 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8VWY4;F8VWX0;F8W0L1;F8VZ66;F8VV47;F8VVE5;F8VUW9;F8VV39;F8VS54 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.0574 3 691.716144 2072.1266 74798.3 0.65917 0.00045596 -0.4377 -0.00030276 0.22148 0.0001532 692.050147002279 698.05774516596 116.79 0.3483 116.79 116.59 116.94 7.6294E-06 88 15 8 0 0 0 1.5658E-05 1 67741 54.253 54.253 1 1.4475 1.2143 0 6421700 2824500 3597200 30150 68 11438 11748 46997 46997 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 394.2039 3 387.53175 1159.57342 97771.05 0.12432 4.8178E-05 -0.29461 -0.00011417 -0.17029 -6.5991E-05 387.865769688587 394.203773379083 16.651 0.41502 16.651 16.448 16.863 0 58 17 6 0 0 0 1.1823E-05 1 3752 99.815 70.342 1 1.2477 1.2264 0 4985400 2268500 2716900 30151 334 11439 11749 46998 46998 RVFQEQER 8 0 2 Unmodified _RVFQEQER_ 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2842 2 546.283254 1090.55196 79383.45 0.59982 0.00032767 -0.64226 -0.00035086 -0.042445 -2.3187E-05 546.283131755866 556.291388118049 17.544 0.27324 17.544 17.344 17.617 0 47 11 6 0 0 0 0.019396 1 4660 69.598 36.758 1 0.54001 0.5916 0 12790000 7824000 4965500 30152 135 11440 11750 46999 46999 RVGLPPGK 8 1 1 Unmodified _RVGLPPGK_ 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;S4R3C2 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 412.2606 2 412.261062 822.507572 92923.07 0.040206 1.6575E-05 -0.61209 -0.00025234 -0.57189 -0.00023577 412.26058691918 421.2721151507 21.14 1.6247 21.14 20.516 22.14 0 162 72 4 0 0 0 0.032956 1 7306 58.981 41.214 1 1.1061 1.2486 0 14897000 6896500 8000800 30153 468 11441 11751 47000 47000 RVLDELTLTK 10 1 1 Unmodified _RVLDELTLTK_ 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.3549 2 594.353345 1186.69214 NaN NaN NaN 0.4401 0.00026158 NaN NaN NaN NaN 74.199 0.73884 74.199 73.915 74.654 0 0 0 0 0.0035885 1 39210 76.228 25.393 1 NaN NaN 0 7010800 7010800 0 + 30154 1161 11442 11752 47001 47001 RVLDELTLTK 10 1 1 Unmodified _RVLDELTLTK_ 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.3532 2 594.353345 1186.69214 NaN NaN NaN -4.4582 -0.0026498 NaN NaN NaN NaN 74.298 0.93732 74.298 73.741 74.678 7.6294E-06 0 0 0 0.014035 1 38565 59.426 23.915 1 NaN NaN 0 6207900 6207900 0 + 30155 1161 11442 11752 47002 47002 RVLGQLHGGPSSCSATGTNR 20 0 2 Unmodified _RVLGQLHGGPSSCSATGTNR_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.7601 4 514.509169 2054.00757 NaN NaN NaN -0.51728 -0.00026614 NaN NaN NaN NaN 25.862 0.35175 25.862 25.725 26.077 0 0 0 0 5.6253E-11 1 11427 85.855 74.25 1 NaN NaN 0 62297000 62297000 0 + 30156 1163 11443 11753 47003 47003 RVLGQLHGGPSSCSATGTNR 20 0 2 Unmodified _RVLGQLHGGPSSCSATGTNR_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.6765 3 685.676466 2054.00757 NaN NaN NaN -0.4564 -0.00031294 NaN NaN NaN NaN 25.854 0.38403 25.854 25.712 26.096 0 0 0 0 0.00030287 1 11502 46.099 37.167 1 NaN NaN 0 72506000 72506000 0 + 30157 1163 11443 11753 47004 47004 RVLGQLHGGPSSCSATGTNR 20 0 2 Unmodified _RVLGQLHGGPSSCSATGTNR_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.0114 3 685.676466 2054.00757 NaN NaN NaN -0.43804 -0.00030035 NaN NaN NaN NaN 28.188 0.46877 28.188 27.997 28.466 0 0 0 0 0.0012445 1 10624 41.115 36.31 1 NaN NaN 0 3542200 3542200 0 + 30158 1163 11443 11753 47005 47005 RVLGQLHGGPSSCSATGTNR 20 0 2 Unmodified _RVLGQLHGGPSSCSATGTNR_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.5087 4 514.509169 2054.00757 NaN NaN NaN -0.50671 -0.00026071 NaN NaN NaN NaN 28.166 0.33031 28.166 27.997 28.328 -1.9073E-06 0 0 0 8.1372E-05 1 10663 51.819 42.773 1 NaN NaN 0 3667600 3667600 0 + 30159 1163 11443 11753 47006 47006 RVLLGETGK 9 1 1 Unmodified _RVLLGETGK_ 0 0 1 P62280;M0QZC5;M0R1H6 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.8066 2 486.795466 971.57638 85797.84 -0.13962 -6.7965E-05 -0.093647 -4.5587E-05 -0.23326 -0.00011355 486.795649815758 495.806383951355 24.858 0.74411 24.858 24.689 25.433 0 170 37 8 0 0 0 1.7763E-05 2 10485 126.55 78.511 1 0.69257 0.84415 0 673880000 368580000 305300000 30160 1641 11444 11754 47007;47008 47007 RVLLGETGK 9 1 1 Unmodified _RVLLGETGK_ 0 0 1 P62280;M0QZC5;M0R1H6 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.8062 2 486.795466 971.57638 86027.27 -0.019458 -9.4723E-06 -0.22729 -0.00011065 -0.24675 -0.00012012 486.795496778459 495.80647951521 24.232 0.92943 24.232 24.034 24.963 -1.9073E-06 170 41 10 0 0 0 1.5608E-05 2 9934 127.94 75.078 1 0.83109 0.99001 0 553280000 312990000 240290000 30161 1641 11444 11754 47009;47010 47009 RVLLGETGK 9 1 1 Unmodified _RVLLGETGK_ 0 0 1 P62280;M0QZC5;M0R1H6 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.8064 2 486.795466 971.57638 85147.81 0.13824 6.7294E-05 -0.020167 -9.8172E-06 0.11807 5.7477E-05 486.795605595339 495.806609084875 26.704 1.2579 26.704 26.444 27.702 0 286 58 10 0 0 0 0.001957 2 10146 89.029 52.818 1 1.0015 0.90314 0 119200000 57395000 61809000 30162 1641 11444 11754 47011;47012 47012 RVLLGETGK 9 1 1 Unmodified _RVLLGETGK_ 0 0 1 P62280;M0QZC5;M0R1H6 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.7956 2 486.795466 971.57638 86119.91 0.034803 1.6942E-05 -0.12522 -6.0955E-05 -0.090414 -4.4013E-05 486.795551048052 495.806547936634 26.466 1.5099 26.466 26.28 27.79 -1.9073E-06 286 65 10 0 0 0 0.0014702 2 9478 93.098 56.541 1 1.0802 0.92374 0 102320000 48934000 53383000 30163 1641 11444 11754 47013;47014 47014 RVLNVTNLEFSDTR 14 0 2 Unmodified _RVLNVTNLEFSDTR_ 0 0 1 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.9696 3 555.296921 1662.86893 81409.02 0.53852 0.00029904 0.60687 0.00033699 1.1454 0.00063603 555.297551995471 561.969217135866 89.482 0.63234 89.482 89.306 89.939 0 102 40 4 0 0 0 0.0029982 2 49459 36.219 34.094 1 1.5991 1.4161 0 3988400 1639200 2349200 30164 1400 11445 11755 47015;47016 47015 RVLNVTNLEFSDTR 14 0 2 Unmodified _RVLNVTNLEFSDTR_ 0 0 1 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.9702 3 555.296921 1662.86893 81786.26 0.32795 0.00018211 0.14601 8.1081E-05 0.47397 0.00026319 555.296728413795 561.969217525287 89.227 0.40788 89.227 89.041 89.448 0 118 25 7 0 0 0 0.0021277 3 48485 38.613 37.177 1 1.9983 1.8076 0 3747600 1433800 2313800 30165 1400 11445 11755 47017;47018;47019 47017 RVLPPNWK 8 1 1 Unmodified _RVLPPNWK_ 0 0 1 P62277 P62277 P62277 RPS13 40S ribosomal protein S13 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.3127 2 505.300719 1008.58688 NaN NaN NaN 0.11182 5.6504E-05 NaN NaN NaN NaN 40.809 0.56507 40.809 40.428 40.993 0 0 0 0 0.045526 1 21352 52.018 32.314 1 NaN NaN 0 13122000 0 13122000 30166 1640 11446 11756 47020 47020 RVLPPNWK 8 1 1 Unmodified _RVLPPNWK_ 0 0 1 P62277 P62277 P62277 RPS13 40S ribosomal protein S13 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.3009 2 505.300719 1008.58688 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.654 1 40.654 40.154 41.154 0 0 0 0 0.045489 1 21299 71.715 35.158 1 30167 1640 11446 11756 47021 47021 RVLPPNWK 8 1 1 Unmodified _RVLPPNWK_ 0 0 1 P62277 P62277 P62277 RPS13 40S ribosomal protein S13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.3008 2 505.300719 1008.58688 87253.45 0.36878 0.00018634 0.49716 0.00025122 0.86594 0.00043756 505.300633043787 514.311967528364 39.126 1.5845 39.126 38.408 39.993 0 362 136 5 0 0 0 0.013087 1 20853 81.32 81.32 1 1.1881 1.3824 0 41303000 20611000 20692000 30168 1640 11446 11756 47022 47022 RVLPPSALQSVA 12 0 1 Unmodified _RVLPPSALQSVA_ 0 0 1 B2RC06;J3KT86;Q96GD4 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.8207 2 619.366787 1236.71902 80851.24 0.76942 0.00047655 -0.37401 -0.00023165 0.39541 0.0002449 619.366670090633 624.370734366543 80.095 1.322 80.095 79.438 80.76 7.6294E-06 462 114 6 0 0 0 0.04567 1 47467 39.148 39.148 1 1.0633 1.1192 0 39896000 17819000 22077000 30169 881;1967 11447 11757 47023 47023 RVLPPSALQSVA 12 0 1 Unmodified _RVLPPSALQSVA_ 0 0 1 B2RC06;J3KT86;Q96GD4 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.3711 2 619.366787 1236.71902 80005.02 0.34924 0.00021631 -0.10167 -6.2968E-05 0.24757 0.00015334 619.366997612991 624.370850331161 78.615 1.3667 78.615 77.927 79.294 7.6294E-06 405 119 5 0 0 0 0.0095381 1 47848 50.292 50.292 1 1.0011 1.1511 0 53167000 24495000 28672000 30170 881;1967 11447 11757 47024 47024 RVLPPSALQSVA 12 0 1 Unmodified _RVLPPSALQSVA_ 0 0 1 B2RC06;J3KT86;Q96GD4 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.3194 2 619.366787 1236.71902 78017.77 0.71134 0.00044058 -0.086238 -5.3413E-05 0.6251 0.00038717 619.36705346657 624.370831071606 91.261 1.7611 91.261 90.444 92.205 0 478 112 6 0 0 0 0.018735 1 50454 51.268 51.268 1 2.1669 1.8627 0 6602800 2365500 4237200 30171 881;1967 11447 11757 47025 47025 RVLPPSALQSVA 12 0 1 Unmodified _RVLPPSALQSVA_ 0 0 1 B2RC06;J3KT86;Q96GD4 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.3713 2 619.366787 1236.71902 78519.07 0.44294 0.00027434 -0.12789 -7.9212E-05 0.31504 0.00019513 619.366943162272 624.370778980713 90.956 1.7946 90.956 90.294 92.089 0 466 113 6 0 0 0 0.027177 1 49647 42.336 42.336 1 2.1436 1.7858 0 6938300 2228200 4710100 30172 881;1967 11447 11757 47026 47026 RVLQALEGLK 10 1 1 Unmodified _RVLQALEGLK_ 0 0 1 B0ZBD0;Q8WVX7;P39019;A0A075B6E2 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.8506 2 563.850773 1125.68699 82663.71 0.42064 0.00023718 0.11542 6.5081E-05 0.53606 0.00030226 563.850693754728 572.86207326387 65.21 0.9576 65.21 64.801 65.759 0 337 85 5 0 0 0 0.016174 1 37506 54.416 23.343 1 1.138 1.291 0 23950000 10966000 12984000 30173 811 11448 11758 47027 47027 RVLQALEGLK 10 1 1 Unmodified _RVLQALEGLK_ 0 0 1 B0ZBD0;Q8WVX7;P39019;A0A075B6E2 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.8513 2 563.850773 1125.68699 81457.45 0.666 0.00037553 -0.19674 -0.00011093 0.46926 0.00026459 563.85057935242 572.861856844087 61.682 0.965 61.682 61.08 62.045 0 308 90 5 0 0 0 0.036272 1 35960 46.158 15.085 1 1.144 1.3256 0 34724000 18060000 16665000 30174 811 11448 11758 47028 47028 RVLTLR 6 0 2 Unmodified _RVLTLR_ 0 0 1 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.2556 2 379.25578 756.497007 95142.26 -0.0311 -1.1795E-05 -0.1952 -7.403E-05 -0.2263 -8.5825E-05 379.255745383682 389.263823620229 26.7 0.73991 26.7 26.516 27.256 0 181 43 8 0 0 0 9.3553E-06 1 12044 161.47 0 1 0.96573 1.058 0 584110000 270150000 313960000 30175 1554;936 11449 11759 47029 47029 RVLTLR 6 0 2 Unmodified _RVLTLR_ 0 0 1 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.2569 2 379.25578 756.497007 96105.55 0.61071 0.00023161 -0.35277 -0.00013379 0.25794 9.7826E-05 379.255468118055 389.263942503826 25.541 0.44342 25.541 25.393 25.836 0 82 25 8 0 0 0 2.6131E-05 1 11123 158.38 0 1 1.1096 1.3519 0 547420000 257330000 290090000 30176 1554;936 11449 11759 47030 47030 RVMGLVPAK 9 1 1 Oxidation (M) _RVM(ox)GLVPAK_ RVM(1)GLVPAK RVM(55.68)GLVPAK 0 1 1 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.8055 2 493.794412 985.574271 89295.63 0.078383 3.8705E-05 -0.022497 -1.1109E-05 0.055886 2.7596E-05 493.794313869747 502.805570571967 25.705 0.37632 25.705 25.528 25.905 1.9073E-06 66 20 5 0 0 0 0.033306 1 11283 55.676 35.89 1 2.0681 2.216 0 12464000 4446100 8018000 30177 587 11450 11760 47031 47031 440 RVNQAIWLLCTGAR 14 0 2 Unmodified _RVNQAIWLLCTGAR_ 0 0 1 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.9768 3 553.303353 1656.88823 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.93 1 101.93 101.43 102.43 0 0 0 0 0.027092 1 57813 39.005 28.189 1 30178 160 11451 11761 47032 47032 RVNSASSSNPPAEVDPDTILK 21 1 1 Unmodified _RVNSASSSNPPAEVDPDTILK_ 0 0 1 Q96DI9;F6VRR5;B4E0L0;Q9BY77 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.3828 3 733.041356 2196.10224 70975.4 0.60073 0.00044036 0.001675 1.2278E-06 0.6024 0.00044159 733.375640868861 739.04899012675 84.801 0.57336 84.801 84.519 85.093 0 198 41 7 0 0 0 0.0050895 4 46247 21.349 21.349 1 0.89891 0.73832 0 4501100 2266000 2235200 30179 1063 11452 11762 47033;47034;47035;47036 47035 RVNSASSSNPPAEVDPDTILK 21 1 1 Unmodified _RVNSASSSNPPAEVDPDTILK_ 0 0 1 Q96DI9;F6VRR5;B4E0L0;Q9BY77 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.3817 3 733.041356 2196.10224 71614.27 0.74539 0.0005464 -0.065073 -4.7702E-05 0.68032 0.0004987 733.37550706127 739.382658941158 84.835 0.50725 84.835 84.559 85.066 0 184 36 7 0 0 0 0.025326 2 45479 15.128 15.128 1 0.97941 0.82641 0 3829700 1882900 1946800 30180 1063 11452 11762 47037;47038 47038 RVPSPVLIK 9 1 1 Unmodified _RVPSPVLIK_ 0 0 1 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.8429 2 504.831852 1007.64915 83846.48 0.46672 0.00023561 -0.039121 -1.975E-05 0.42759 0.00021586 504.831778308565 513.84292478154 48.144 0.78939 48.144 47.852 48.642 0 210 54 7 0 0 0 0.0035972 2 26823 76.17 43.357 1 1.3202 1.5598 0 150560000 68075000 82489000 30181 907 11453 11763 47039;47040 47039 RVPTAPAATSK 11 1 1 Unmodified _RVPTAPAATSK_ 0 0 1 P14635;E9PC90;H1UBN2;D6RHI0 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.8167 2 549.81693 1097.61931 80011.31 0.63252 0.00034777 -0.24147 -0.00013276 0.39105 0.00021501 549.816735502652 558.828059953879 18.419 0.24057 18.419 18.332 18.572 0 43 8 8 0 0 0 8.744E-13 2 5338 148.28 96.934 1 0.75561 0.90816 0 76459000 45579000 30879000 30182 1483 11454 11764 47041;47042 47042 RVPTAPAATSK 11 1 1 Unmodified _RVPTAPAATSK_ 0 0 1 P14635;E9PC90;H1UBN2;D6RHI0 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.8286 2 549.81693 1097.61931 80851.3 0.33239 0.00018275 -0.10292 -5.6587E-05 0.22947 0.00012617 549.816911065211 558.827986849858 18.369 0.17113 18.369 18.264 18.435 0 24 4 7 0 0 0 3.8502E-17 2 5042 161.19 110.39 1 0.69345 0.81395 0 59420000 33132000 26289000 30183 1483 11454 11764 47043;47044 47043 RVPTAPAATSK 11 1 1 Unmodified _RVPTAPAATSK_ 0 0 1 P14635;E9PC90;H1UBN2;D6RHI0 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.8169 2 549.81693 1097.61931 79805.55 0.0048523 2.6679E-06 0.29738 0.00016351 0.30224 0.00016617 549.817083831069 558.82829962665 19.334 0.28005 19.334 19.231 19.511 0 42 10 8 0 0 0 0.019752 2 5069 48.188 27.318 1 1.2243 1.016 0 5837500 2650600 3186900 30184 1483 11454 11764 47045;47046 47045 RVPTAPAATSK 11 1 1 Unmodified _RVPTAPAATSK_ 0 0 1 P14635;E9PC90;H1UBN2;D6RHI0 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.8283 2 549.81693 1097.61931 80623.27 0.092105 5.0641E-05 0.19905 0.00010944 0.29116 0.00016008 549.817120940652 558.828154436083 19.201 0.19933 19.201 19.083 19.283 0 49 9 7 0 0 0 0.0089721 2 4523 56.359 35.489 1 1.193 0.99907 0 5632900 2486600 3146300 30185 1483 11454 11764 47047;47048 47047 RVPVLGK 7 1 1 Unmodified _RVPVLGK_ 0 0 1 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;B3KXA9 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 384.7582 2 384.758156 767.501758 97870.27 0.28296 0.00010887 -0.087617 -3.3711E-05 0.19534 7.5159E-05 384.758002158627 393.769264327657 26.581 0.40385 26.581 26.418 26.822 0 68 20 5 0 0 0 0.021027 1 11955 105.27 81.474 1 1.5288 1.7843 0 46811000 17587000 29224000 30186 883 11455 11765 47049 47049 RVPVPPAAGS 10 0 1 Unmodified _RVPVPPAAGS_ 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.7746 2 475.774534 949.534515 90869.83 0.14598 6.9454E-05 -0.016427 -7.8153E-06 0.12955 6.1638E-05 475.774584144695 480.778548913954 36.841 1.3207 36.841 36.461 37.781 0 368 104 6 0 0 0 0.0030597 3 18897 71.877 71.877 1 0.88757 1.0169 0 51158000 27957000 23201000 30187 1389 11456 11766 47050;47051;47052 47050 RVPVPPAAGS 10 0 1 Unmodified _RVPVPPAAGS_ 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.7785 2 475.774534 949.534515 87877.32 0.00050314 2.3938E-07 -0.48253 -0.00022958 -0.48203 -0.00022934 475.774513170936 480.778569086606 42.201 1.9493 42.201 41.374 43.323 0 499 136 5 0 0 0 0.046057 4 19374 43.808 43.808 1 1.0625 0.91443 0 3377500 1493400 1884100 30188 1389 11456 11766 47053;47054;47055;47056 47055 RVSDILR 7 0 2 Unmodified _RVSDILR_ 0 0 1 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 429.7615 2 429.761426 857.5083 NaN NaN NaN 0.62465 0.00026845 NaN NaN NaN NaN 29.593 0.2468 29.593 29.431 29.677 0 0 0 0 0.014432 1 14331 106.04 3.3283 1 NaN NaN 0 29236000 29236000 0 30189 1286 11457 11767 47057 47057 RVSDILR 7 0 2 Unmodified _RVSDILR_ 0 0 1 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 429.7615 2 429.761426 857.5083 NaN NaN NaN 0.77839 0.00033452 NaN NaN NaN NaN 32.97 0.34417 32.97 32.736 33.08 0 0 0 0 0.045454 1 13875 60.972 0 1 NaN NaN 0 3178300 3178300 0 30190 1286 11457 11767 47058 47058 RVSISEGDDK 10 1 1 Unmodified _RVSISEGDDK_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.2891 2 553.277835 1104.54112 80770.77 0.52478 0.00029035 0.44196 0.00024452 0.96673 0.00053487 553.278055904725 562.2892592851 18.078 0.75918 18.078 17.78 18.539 0 211 41 6 0 0 0 2.0181E-05 1 5033 103.69 44.71 1 0.73065 0.87969 0 100120000 59729000 40391000 30191 1506 11458 11768 47059 47059 RVSISEGDDK 10 1 1 Unmodified _RVSISEGDDK_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.2785 2 553.277835 1104.54112 81832.5 0.035715 1.976E-05 0.51064 0.00028252 0.54635 0.00030228 553.278181176331 562.289262300049 19.011 0.58545 19.011 18.826 19.411 0 123 30 5 0 0 0 0.0016039 2 4853 78.488 36.612 1 0.87503 0.73952 0 7985300 4385800 3599400 30192 1506 11458 11768 47060;47061 47060 RVSLEPHQGPGTPESK 16 1 1 Unmodified _RVSLEPHQGPGTPESK_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.6324 3 573.632192 1717.87475 78365.8 0.66448 0.00038117 -0.0098105 -5.6276E-06 0.65467 0.00037554 573.966296915716 579.63958753422 23.866 0.26379 23.866 23.75 24.014 -1.9073E-06 65 13 7 0 0 0 4.3256E-09 1 9708 93.754 70.952 1 0.80973 0.91722 0 23598000 13430000 10168000 30193 186;1747 11459 11769 47062 47062 RVSLEPHQGPGTPESK 16 1 1 Unmodified _RVSLEPHQGPGTPESK_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.9585 2 859.94465 1717.87475 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.872 1 23.872 23.372 24.372 -1.9073E-06 0 0 0 0.026911 1 9699 47.915 31.382 1 30194 186;1747 11459 11769 47063 47063 RVSLEPHQGPGTPESK 16 1 1 Unmodified _RVSLEPHQGPGTPESK_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.967 3 573.632192 1717.87475 80077.15 0.73611 0.00042226 0.26881 0.0001542 1.0049 0.00057645 573.631991221916 579.639570960387 22.619 0.35723 22.619 22.412 22.77 1.9073E-06 70 14 9 0 0 0 2.0195E-57 2 8625 151.04 100.01 1 0.60476 0.69897 0 31633000 19165000 12468000 30195 186;1747 11459 11769 47064;47065 47065 RVSLEPHQGPGTPESK 16 1 1 Unmodified _RVSLEPHQGPGTPESK_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.9669 3 573.632192 1717.87475 78602.05 0.29365 0.00016845 0.19 0.00010899 0.48365 0.00027744 573.632209236685 579.63975671382 25.728 0.51151 25.728 25.431 25.943 0 113 20 10 0 0 0 3.0959E-05 2 9465 62.765 45.886 1 0.91742 0.79242 0 13681000 7169200 6512000 30196 186;1747 11459 11769 47066;47067 47066 RVSLEPHQGPGTPESK 16 1 1 Unmodified _RVSLEPHQGPGTPESK_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.9658 3 573.632192 1717.87475 79039.47 0.51286 0.00029419 -0.037562 -2.1547E-05 0.4753 0.00027265 573.966496189625 579.639615449514 25.405 0.42366 25.405 25.227 25.65 0 127 20 9 0 0 0 3.8338E-05 1 8698 50.831 39.969 1 0.91438 0.77383 0 11939000 6334700 5604300 30197 186;1747 11459 11769 47068 47068 RVTFALPDDAETEDTGVLNVK 21 1 1 Unmodified _RVTFALPDDAETEDTGVLNVK_ 0 0 1 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.3994 3 764.056895 2289.14886 68699.09 0.96345 0.00073613 -0.41972 -0.00032069 0.54373 0.00041544 764.056366949749 770.064301502596 112.97 0.47014 112.97 112.74 113.21 0 140 20 10 0 0 0 3.703E-16 2 65675 106.86 106.86 1 1.3094 1.148 0 28868000 13035000 15832000 30198 924 11460 11770 47069;47070 47069 RVTFALPDDAETEDTGVLNVK 21 1 1 Unmodified _RVTFALPDDAETEDTGVLNVK_ 0 0 1 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 770.3995 3 764.056895 2289.14886 69507.66 0.81398 0.00062193 -0.36299 -0.00027735 0.45099 0.00034458 764.390559135879 770.398359712314 112.82 0.50473 112.82 112.62 113.12 0 162 23 10 0 0 0 4.6026E-09 3 64669 79.635 79.635 1 1.3268 1.1241 0 15169000 6292000 8876800 30199 924 11460 11770 47071;47072;47073 47071 RVTIMPK 7 1 1 Unmodified _RVTIMPK_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;A8K4Y7;Q6NXT2;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.7572 2 422.757298 843.500044 90224.48 0.12045 5.0923E-05 -0.81844 -0.000346 -0.69799 -0.00029508 422.75714505734 431.76828631602 26.874 1.1758 26.874 26.62 27.796 1.9073E-06 369 72 9 0 0 0 0.017001 1 12099 125.5 15.167 1 0.52477 0.64495 0 2448000000 1574000000 874050000 30200 827;1661;1865;1828 11461 11771 47074 47074 RVTIMPK 7 1 1 Unmodified _RVTIMPK_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;A8K4Y7;Q6NXT2;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.7572 2 422.757298 843.500044 91799.19 0.15015 6.3478E-05 -0.82205 -0.00034753 -0.6719 -0.00028405 422.757087454944 431.768257153922 25.599 1.1866 25.599 25.441 26.627 1.9073E-06 339 68 10 0 0 0 0.0097987 1 11158 131.27 24.852 1 0.52897 0.6374 0 3443800000 2113200000 1330700000 30201 827;1661;1865;1828 11461 11771 47075 47075 RVTIMPK 7 1 1 Unmodified _RVTIMPK_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;A8K4Y7;Q6NXT2;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 422.7575 2 422.757298 843.500044 91746.48 -0.3659 -0.00015469 -1.0398 -0.0004396 -1.4057 -0.00059429 422.757531135771 431.767521430641 29.031 4.5278 29.031 28.446 32.974 1.9073E-06 1093 286 6 0 0 0 0.055402 1 11498 64.523 0 1 1.032 0.9551 0 437540000 215110000 222430000 30202 827;1661;1865;1828 11461 11771 47076 47076 RVTIMPK 7 1 1 Oxidation (M) _RVTIM(ox)PK_ RVTIM(1)PK RVTIM(79.81)PK 0 1 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;A8K4Y7;Q6NXT2;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 430.7545 2 430.754756 859.494958 85002.74 -0.62508 -0.00026926 -1.5998 -0.0006891 -2.2248 -0.00095836 430.755500518891 439.7652151233 19.475 1.8294 19.475 19.191 21.021 0 389 90 11 0 0 0 0.061875 1 4583 79.809 19.101 1 0.5044 0.43499 0 580570000 338540000 242030000 30203 827;1661;1865;1828 11461 11772 47077 47077 655;1688 RVVPSDLYPLVLGFLR 16 0 2 Unmodified _RVVPSDLYPLVLGFLR_ 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;S4R349;S4R402;S4R341 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.365 3 615.364606 1843.07199 77767.02 0.1315 8.0922E-05 0.43552 0.000268 0.56702 0.00034892 615.365013318736 622.037177685053 133.36 0.24556 133.36 133.26 133.5 -1.5259E-05 38 6 9 0 0 0 0.023303 1 87342 20.049 20.049 1 1.068 1.1592 0 28541000 14963000 13578000 30204 468 11462 11773 47078 47078 RVVPSDLYPLVLGFLR 16 0 2 Unmodified _RVVPSDLYPLVLGFLR_ 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;S4R349;S4R402;S4R341 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.3713 3 615.364606 1843.07199 77384.91 -0.045338 -2.7899E-05 0.31922 0.00019644 0.27388 0.00016854 615.364678222747 622.036925562401 133.33 0.2542 133.33 133.23 133.48 -1.5259E-05 34 6 7 0 0 0 3.8792E-05 1 89531 71.08 71.08 1 0.94798 1.0813 0 41737000 20064000 21673000 30205 468 11462 11773 47079 47079 RVVVPELSAGVASR 14 0 2 Unmodified _RVVVPELSAGVASR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.6154 3 480.615814 1438.82561 87633.74 0.11186 5.3763E-05 0.32822 0.00015775 0.44008 0.00021151 480.615882981539 487.28816516033 69.034 0.77164 69.034 68.657 69.428 0 312 66 6 0 0 0 2.0858E-05 2 40094 71.08 68.306 1 0.73982 0.80378 0 37401000 21365000 16036000 30206 1942 11463 11774 47080;47081 47081 RVVVPELSAGVASR 14 0 2 Unmodified _RVVVPELSAGVASR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.2716 3 480.615814 1438.82561 88424.7 0.092316 4.4369E-05 -0.11749 -5.6466E-05 -0.02517 -1.2097E-05 480.615905873715 487.287822830926 67.073 0.60194 67.073 66.784 67.386 0 275 50 8 0 0 0 0.0086225 1 39676 27.643 24.955 1 0.71852 0.81657 0 36221000 20497000 15724000 30207 1942 11463 11774 47082 47082 RVVVPELSAGVASR 14 0 2 Unmodified _RVVVPELSAGVASR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.2884 3 480.615814 1438.82561 85847.67 0.14392 6.9171E-05 0.18254 8.7733E-05 0.32647 0.0001569 480.615852133739 487.28807824474 78.272 0.94313 78.272 77.94 78.883 0 294 59 8 0 0 0 0.0094443 2 41879 28.956 28.956 1 1.4119 1.1883 0 11456000 4760600 6695200 30208 1942 11463 11774 47083;47084 47083 RVVVPELSAGVASR 14 0 2 Unmodified _RVVVPELSAGVASR_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.6164 3 480.615814 1438.82561 86093.71 0.34216 0.00016445 -0.1396 -6.7094E-05 0.20256 9.7356E-05 480.615780378949 487.287975730388 78.343 0.68501 78.343 78.055 78.74 0 268 45 8 0 0 0 0.00015408 2 41143 47.545 47.545 1 1.4827 1.3559 0 9471400 3855600 5615800 30209 1942 11463 11774 47085;47086 47086 RVVYPLEK 8 1 1 Unmodified _RVVYPLEK_ 0 0 1 O60832;C9IYT0;H7C2Q2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.3001 2 502.300384 1002.58622 86246.44 0.21865 0.00010983 0.15734 7.9034E-05 0.37599 0.00018886 502.300580251888 511.311360382365 34.538 0.62587 34.538 34.255 34.88 0 220 52 7 0 0 0 0.03312 1 17246 58.917 58.917 1 0.80064 0.96374 0 96700000 53109000 43591000 30210 1398 11464 11775 47087 47087 RVVYPLEK 8 1 1 Unmodified _RVVYPLEK_ 0 0 1 O60832;C9IYT0;H7C2Q2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.3112 2 502.300384 1002.58622 85098.91 0.11175 5.613E-05 0.0091274 4.5847E-06 0.12087 6.0715E-05 502.300232927502 511.311528351303 33.036 0.55515 33.036 32.735 33.29 -3.8147E-06 251 50 7 0 0 0 0.041414 1 16356 55.676 37.641 1 0.73516 0.86565 0 87561000 48606000 38955000 30211 1398 11464 11775 47088 47088 RVVYPLEK 8 1 1 Unmodified _RVVYPLEK_ 0 0 1 O60832;C9IYT0;H7C2Q2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 502.3005 2 502.300384 1002.58622 84060.32 0.058751 2.9511E-05 0.37641 0.00018907 0.43516 0.00021858 502.30049625139 511.311624912715 38.042 0.83077 38.042 37.637 38.468 0 296 66 7 0 0 0 0.044139 2 16710 54.611 54.611 1 0.70958 0.60032 0 11163000 6642500 4520400 30212 1398 11464 11775 47089;47090 47090 RVYLTTQLK 9 1 1 Unmodified _RVYLTTQLK_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.3488 2 561.337498 1120.66044 80817.84 0.40032 0.00022471 -0.17262 -9.6895E-05 0.2277 0.00012782 561.337393950062 570.348562598424 49.257 0.57457 49.257 49.034 49.609 0 162 47 5 0 0 0 0.057308 1 24027 44.349 25.371 1 1.7 1.4221 0 3432700 1382100 2050700 30213 44 11465 11776 47091 47091 RWQLSVATEQPELEGPR 17 0 2 Unmodified _RWQLSVATEQPELEGPR_ 0 0 1 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.3468 3 666.013072 1995.01739 73693.41 0.48931 0.00032589 0.19599 0.00013053 0.6853 0.00045642 666.347366719641 672.685482031244 97.679 0.69244 97.679 97.284 97.977 0 163 38 5 0 0 0 0.00342 1 54114 29.422 29.422 1 1.2551 1.1382 0 5508000 2506900 3001100 30214 2065 11466 11777 47092 47092 RYAICSALAASALPALVMSK 20 1 1 Oxidation (M) _RYAICSALAASALPALVM(ox)SK_ RYAICSALAASALPALVM(1)SK RYAICSALAASALPALVM(47.75)SK 0 1 1 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;B4DMJ2;H3BTP7 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.054 3 703.711349 2108.11222 73689.29 0.76548 0.00053868 -0.4224 -0.00029725 0.34309 0.00024143 704.045445733635 709.718637003932 111.36 0.87125 111.36 111 111.87 7.6294E-06 216 59 7 0 0 0 1.2764E-05 1 71799 47.75 47.75 1 0.95334 1.0571 0 9542500 4663800 4878700 30215 1548 11467 11778 47093 47093 1305 RYAICSALAASALPALVMSK 20 1 1 Oxidation (M) _RYAICSALAASALPALVM(ox)SK_ RYAICSALAASALPALVM(1)SK RYAICSALAASALPALVM(45.99)SK 0 1 1 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;B4DMJ2;H3BTP7 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.0546 3 703.711349 2108.11222 72371.25 0.92389 0.00065015 -0.40523 -0.00028517 0.51865 0.00036498 704.045932941367 710.053227390456 122.32 0.6767 122.32 122.09 122.77 7.6294E-06 202 32 10 0 0 0 2.258E-05 1 72888 45.992 45.992 1 0.61971 0.5396 0 20499000 12043000 8456200 30216 1548 11467 11778 47094 47094 1305 RYAICSALAASALPALVMSK 20 1 1 Oxidation (M) _RYAICSALAASALPALVM(ox)SK_ RYAICSALAASALPALVM(1)SK RYAICSALAASALPALVM(55.99)SK 0 1 1 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;B4DMJ2;H3BTP7 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.7201 3 703.711349 2108.11222 73000.27 0.8772 0.0006173 -0.31187 -0.00021947 0.56534 0.00039783 704.045872621663 710.053343753948 122.09 0.75296 122.09 121.81 122.56 0 198 36 8 0 0 0 1.8883E-06 2 71789 55.988 47.387 1 0.642 0.54625 0 36101000 22997000 13104000 30217 1548 11467 11778 47095;47096 47095 1305 RYAICSALAASALPALVMSK 20 1 1 Unmodified _RYAICSALAASALPALVMSK_ 0 0 1 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;B4DMJ2;H3BTP7 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.3881 3 698.37971 2092.1173 71637.16 0.91578 0.00063956 0.089331 6.2387E-05 1.0051 0.00070195 698.380062741247 704.722223018172 129.4 0.52605 129.4 129.22 129.75 0 118 22 7 0 0 0 1.6572E-06 2 77408 41.256 41.256 1 1.1951 1.0027 0 6476900 2663600 3813300 30218 1548 11467 11779 47097;47098 47098 RYASGSSASLGGPESAVA 18 0 1 Unmodified _RYASGSSASLGGPESAVA_ 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.9091 2 833.90519 1665.79583 NaN NaN NaN 0.22526 0.00018785 NaN NaN NaN NaN 52.005 0.34695 52.005 51.806 52.153 0 0 0 0 0.052145 1 28746 29.638 22.939 1 NaN NaN 0 7262100 0 7262100 30219 1754 11468 11780 47099 47099 RYAVPSAGLR 10 0 2 Unmodified _RYAVPSAGLR_ 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.3128 2 545.311815 1088.60908 81919.39 0.4474 0.00024397 1.7466 0.00095246 2.194 0.0011964 545.312311613695 555.320246248159 37.222 0.57116 37.222 37.004 37.575 0 211 47 9 0 0 0 0.0071234 1 19253 61.765 22.802 1 0.64384 0.7512 0 101040000 64644000 36391000 30220 1665 11469 11781 47100 47100 RYDDPEVQK 9 1 1 Unmodified _RYDDPEVQK_ 0 0 1 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;D6RJI2 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.7847 2 575.280377 1148.5462 79260.61 0.022615 1.301E-05 1.7571 0.0010108 1.7797 0.0010238 575.280892758962 584.292721405209 19.248 0.41285 19.248 19.098 19.511 0 62 20 5 0 0 0 0.0063448 1 5003 70.908 46.754 1 1.4379 1.2117 0 7518100 3366900 4151200 30221 1092 11470 11782 47101 47101 RYDQDLCYTDILFTEQER 18 0 2 Unmodified _RYDQDLCYTDILFTEQER_ 0 0 1 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 795.7036 3 789.030352 2364.06923 NaN NaN NaN -0.19925 -0.00015722 NaN NaN NaN NaN 115.91 0.28014 115.91 115.78 116.06 0 0 0 0 0.046339 1 67107 22.985 19.932 1 NaN NaN 0 1064300 0 1064300 30222 794 11471 11783 47102 47102 RYDYCDIPECEDK 13 1 1 Unmodified _RYDYCDIPECEDK_ 0 0 1 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.5742 3 588.239755 1761.69744 NaN NaN NaN -0.43033 -0.00025314 NaN NaN NaN NaN 42.595 0.13744 42.595 42.523 42.66 0 0 0 0 0.033605 1 23007 32.275 27.959 1 NaN NaN 0 6040100 6040100 0 + 30223 1157 11472 11784 47103 47103 RYEDQELTGK 10 1 1 Unmodified _RYEDQELTGK_ 0 0 1 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.8158 2 619.804217 1237.59388 NaN NaN NaN 0.098683 6.1164E-05 NaN NaN NaN NaN 20.197 0.33243 20.197 20.018 20.35 0 0 0 0 1.837E-30 1 6469 167.09 136.83 1 NaN NaN 0 80234000 0 80234000 30224 2103 11473 11785 47104 47104 RYELPAPSSGQK 12 1 1 Unmodified _RYELPAPSSGQK_ 0 0 1 Q53HE3;B2R7W3;O75934 Q53HE3 Q53HE3 BCAS2 Pre-mRNA-splicing factor SPF27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.8616 2 666.848958 1331.68336 76584.8 0.69736 0.00046504 -1.0107 -0.00067399 -0.31334 -0.00020895 666.848546040425 675.859239829703 32.356 0.33585 32.356 32.185 32.521 0 62 25 4 0 0 0 0.0043853 2 16062 58.132 58.132 1 1.7719 1.9719 0 10764000 3815700 6948700 30225 854 11474 11786 47105;47106 47105 RYESHPVCADLQAK 14 1 1 Unmodified _RYESHPVCADLQAK_ 0 0 1 A4D1N4;C9JRZ6;Q9NX63 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.6141 3 558.606989 1672.79914 81528.02 0.27489 0.00015356 -0.1202 -6.7146E-05 0.15469 8.6409E-05 558.606781035732 564.614524931715 24.227 0.28252 24.227 24.053 24.335 0 32 10 4 0 0 0 0.00055452 1 9969 49.216 44.748 1 1.3167 1.4583 0 8230200 3870800 4359400 30226 664 11475 11787 47107 47107 RYETLVGTIGK 11 1 1 Unmodified _RYETLVGTIGK_ 0 0 1 H3BSB3;H3BNT4;Q53HB4;Q99547 H3BSB3 H3BSB3 MPHOSPH6 M-phase phosphoprotein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.8631 2 618.85097 1235.68739 79490.02 0.38847 0.0002404 0.70506 0.00043633 1.0935 0.00067673 618.851037828117 627.862885730272 54.684 0.40278 54.684 54.556 54.959 0 98 38 4 0 0 0 0.0021829 3 30754 68.536 47.665 1 0.63791 0.68245 0 12831000 5469000 7362200 30227 1300 11476 11788 47108;47109;47110 47109 RYLEGTSCIAGVLVPAK 17 1 1 Unmodified _RYLEGTSCIAGVLVPAK_ 0 0 1 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.0077 3 612.001228 1832.98185 NaN NaN NaN -0.82666 -0.00050592 NaN NaN NaN NaN 103.18 0.50794 103.18 103.02 103.53 0 0 0 0 0.0049022 1 58638 40.349 35.881 1 NaN NaN 0 2622700 0 2622700 30228 397;1622 11477 11789 47111 47111 RYLEGTSCIAGVLVPAK 17 1 1 Unmodified _RYLEGTSCIAGVLVPAK_ 0 0 1 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.0085 3 612.001228 1832.98185 NaN NaN NaN -0.71214 -0.00043583 NaN NaN NaN NaN 102.87 0.41324 102.87 102.65 103.06 -7.6294E-06 0 0 0 0.010881 1 57620 34.262 30.601 1 NaN NaN 0 1669400 0 1669400 30229 397;1622 11477 11789 47112 47112 RYLTSFPIDDR 11 0 2 Unmodified _RYLTSFPIDDR_ 0 0 1 P07199;Q71VN3 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.5737 3 461.573614 1381.69901 89976.91 0.23283 0.00010747 0.25704 0.00011864 0.48987 0.00022611 461.573598810698 468.246104286502 81.111 0.67757 81.111 80.843 81.521 0 114 42 4 0 0 0 0.0081789 1 43957 29.303 29.303 1 1.6636 1.5085 0 2950100 1255000 1695100 30230 1450 11478 11790 47113 47113 RYTCGEAPDYDR 12 0 2 Unmodified _RYTCGEAPDYDR_ 0 0 1 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.8289 2 751.820072 1501.62559 70322.18 0.38537 0.00028973 -0.05268 -3.9606E-05 0.33269 0.00025013 752.321071433051 761.828354304823 21.843 0.25196 21.843 21.744 21.996 0 26 10 4 0 0 0 0.0061808 1 7899 55.401 38.46 1 2.3308 2.2922 0 5345100 1653700 3691300 30231 1503 11479 11791 47114 47114 RYWEEETVPTTAGASPGPPR 20 0 2 Unmodified _RYWEEETVPTTAGASPGPPR_ 0 0 1 B0UZZ8;O15213;A8K9A1;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.6918 3 734.358908 2200.0549 71596.52 0.53769 0.00039486 -0.29867 -0.00021933 0.23902 0.00017553 734.692729978954 741.030813579014 67.322 0.45033 67.322 67.133 67.583 0 87 37 4 0 0 0 0.0001518 2 38858 36.253 36.253 1 0.62762 0.68796 0 12683000 6805800 5877400 30232 809 11480 11792 47115;47116 47115 RYWEEETVPTTAGASPGPPR 20 0 2 Unmodified _RYWEEETVPTTAGASPGPPR_ 0 0 1 B0UZZ8;O15213;A8K9A1;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.0315 3 734.358908 2200.0549 70300.41 0.56117 0.0004121 0.0091987 6.7552E-06 0.57037 0.00041885 734.693148933496 741.365402837431 76.544 0.58668 76.544 76.335 76.921 0 245 40 8 0 0 0 1.0185E-06 2 40786 46.578 46.578 1 1.2958 1.101 0 7957800 2512200 5445700 30233 809 11480 11792 47117;47118 47118 RYWEEETVPTTAGASPGPPR 20 0 2 Unmodified _RYWEEETVPTTAGASPGPPR_ 0 0 1 B0UZZ8;O15213;A8K9A1;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 741.0303 3 734.358908 2200.0549 71070.16 0.56931 0.00041808 -0.078905 -5.7944E-05 0.49041 0.00036014 734.358392887544 741.030980665064 76.76 0.52909 76.76 76.562 77.091 0 221 36 9 0 0 0 4.2513E-05 3 40121 27.32 27.32 1 1.4211 1.2927 0 6743100 3121000 3622000 30234 809 11480 11792 47119;47120;47121 47121 SAAEIVQEIENIEK 14 1 0 Unmodified _SAAEIVQEIENIEK_ 0 0 0 Q53H10;A0A024R2I7 Q53H10 Q53H10 RAD18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.9169 2 786.90941 1571.80427 71146.41 1.1468 0.0009024 -0.52265 -0.00041128 0.62412 0.00049112 786.908776627797 791.417591952018 115.75 0.36838 115.75 115.55 115.92 0 67 25 4 0 0 0 0.0002188 1 73780 66.663 57.175 1 1.4594 1.4696 0 5345700 2311700 3034000 30235 113 11481 11793 47122 47122 SAAEMYGSSFDLDYDFQR 18 0 1 Oxidation (M) _SAAEM(ox)YGSSFDLDYDFQR_ SAAEM(1)YGSSFDLDYDFQR SAAEM(92.04)YGSSFDLDYDFQR 0 1 0 G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6;G3V5X6;G3V3K6;G3V251 G3V4W0 G3V4W0 HNRNPC MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1064.4463 2 1059.44148 2116.8684 59400.68 0.7575 0.00080252 -0.26254 -0.00027814 0.49496 0.00052438 1059.44135841345 1064.94673869868 101.67 0.99013 101.67 101.21 102.2 0 573 77 10 0 0 0 3.7442E-08 4 62778 92.039 92.039 1 1.2836 1.4189 0 57766000 26311000 31455000 30236 837 11482 11794 47123;47124;47125;47126 47125 665 SAAEMYGSSFDLDYDFQR 18 0 1 Oxidation (M) _SAAEM(ox)YGSSFDLDYDFQR_ SAAEM(1)YGSSFDLDYDFQR SAAEM(116.51)YGSSFDLDYDFQR 0 1 0 G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6;G3V5X6;G3V3K6;G3V251 G3V4W0 G3V4W0 HNRNPC MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.9459 2 1059.44148 2116.8684 59641.37 0.5155 0.00054614 -0.14373 -0.00015228 0.37176 0.00039386 1059.94298067729 1064.44541784791 101.08 1.0317 101.08 100.62 101.65 -7.6294E-06 575 80 10 0 0 0 1.0515E-16 4 63857 116.51 116.51 1 1.2503 1.4408 0 72907000 31008000 41899000 30237 837 11482 11794 47127;47128;47129;47130 47129 665 SAAEMYGSSFDLDYDFQR 18 0 1 Oxidation (M) _SAAEM(ox)YGSSFDLDYDFQR_ SAAEM(1)YGSSFDLDYDFQR SAAEM(55.84)YGSSFDLDYDFQR 0 1 0 G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6;G3V5X6;G3V3K6;G3V251 G3V4W0 G3V4W0 HNRNPC MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1059.4427 2 1059.44148 2116.8684 59899.16 0.68203 0.00072257 0.38271 0.00040546 1.0647 0.001128 1059.44161285767 1064.44586515585 113.83 0.77821 113.83 113.48 114.25 7.6294E-06 203 34 9 0 0 0 2.774E-05 1 66521 55.841 55.841 1 0.4259 0.36609 0 6589800 4459800 2130100 30238 837 11482 11794 47131 47131 665 SAAEMYGSSFDLDYDFQR 18 0 1 Oxidation (M) _SAAEM(ox)YGSSFDLDYDFQR_ SAAEM(1)YGSSFDLDYDFQR SAAEM(46.96)YGSSFDLDYDFQR 0 1 0 G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6;G3V5X6;G3V3K6;G3V251 G3V4W0 G3V4W0 HNRNPC MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1059.9445 2 1059.44148 2116.8684 60404.67 0.25345 0.00026852 0.18813 0.00019932 0.44159 0.00046783 1059.94318290257 1064.44565878619 114.1 1.0372 114.1 113.63 114.67 0 196 45 6 0 0 0 0.00013954 1 65598 46.964 46.964 1 0.37918 0.32128 0 3055300 1934700 1120600 30239 837 11482 11794 47132 47132 665 SAAEMYGSVTEHPSPSPLLSSSFDLDYDFQR 31 0 1 Oxidation (M) _SAAEM(ox)YGSVTEHPSPSPLLSSSFDLDYDFQR_ SAAEM(1)YGSVTEHPSPSPLLSSSFDLDYDFQR SAAEM(45.14)YGSVTEHPSPSPLLSSSFDLDYDFQR 0 1 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575 G3V576 G3V576 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1154.1914 3 1150.52079 3448.54053 57191.2 0.15584 0.0001793 -0.29932 -0.00034437 -0.14348 -0.00016507 1151.18903943418 1154.19064900163 115.14 0.44604 115.14 114.94 115.39 0 163 28 9 0 0 0 4.7043E-08 1 73209 45.137 43.302 1 1.489 1.55 0 21111000 8484200 12627000 30240 781 11483 11795 47133 47133 615 SAAGYPDYYCK 11 1 0 Unmodified _SAAGYPDYYCK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.7739 2 647.774071 1293.53359 NaN NaN NaN -0.12235 -7.9258E-05 NaN NaN NaN NaN 40.528 0.4688 40.528 40.335 40.803 0 0 0 0 0.010047 1 21145 59.067 47.577 1 NaN NaN 0 5386600 5386600 0 30241 1366 11484 11796 47134 47134 SAAGYPDYYCK 11 1 0 Unmodified _SAAGYPDYYCK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.775 2 647.774071 1293.53359 NaN NaN NaN 0.043604 2.8246E-05 NaN NaN NaN NaN 39.539 0.32684 39.539 39.491 39.818 0 0 0 0 7.1644E-08 1 21113 108.43 93.282 1 NaN NaN 0 4309700 4309700 0 30242 1366 11484 11796 47135 47135 SAAGYPDYYCK 11 1 0 Unmodified _SAAGYPDYYCK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.7742 2 647.774071 1293.53359 76369.31 0.45157 0.00029252 0.019718 1.2773E-05 0.47129 0.00030529 647.774253705768 651.781140019408 47.194 0.57957 47.194 46.925 47.504 -3.8147E-06 152 47 5 0 0 0 0.022516 1 22806 42.718 37.516 1 0.82737 0.69484 0 2165400 1173700 991710 30243 1366 11484 11796 47136 47136 SAALPIFSSFVSNWDEATK 19 1 0 Unmodified _SAALPIFSSFVSNWDEATK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1036.0145 2 1035.51256 2069.01057 59310.36 0.47163 0.00048838 0.33506 0.00034696 0.80669 0.00083534 1036.01423618998 1039.52027036986 133.45 0.4288 133.45 133.16 133.59 0 63 11 12 0 0 0 5.4213E-282 1 87411 315.21 298.18 1 0.55191 0.66045 0 879200000 569990000 309210000 30244 1415 11485 11797 47137 47137 SAALPIFSSFVSNWDEATK 19 1 0 Unmodified _SAALPIFSSFVSNWDEATK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1036.0139 2 1035.51256 2069.01057 59580.61 0.019829 2.0533E-05 0.45736 0.0004736 0.47719 0.00049414 1036.01436617614 1040.02154526745 133.39 0.65897 133.39 132.91 133.57 0 71 21 12 0 0 0 5.1607E-227 3 89581 290.26 273.24 1 0.53762 0.63475 0 1047300000 682760000 364530000 30245 1415 11485 11797 47138;47139;47140 47139 SAALPIFSSFVSNWDEATK 19 1 0 Unmodified _SAALPIFSSFVSNWDEATK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1036.0144 2 1035.51256 2069.01057 58638.98 0.51116 0.00052931 0.058927 6.1019E-05 0.57009 0.00059033 1036.01404399754 1040.02115055841 134.89 0.44014 134.89 134.56 135 0 25 8 9 0 0 0 1.1251E-05 2 82607 71.98 71.98 1 0.6946 0.61058 0 230340000 131070000 99266000 30246 1415 11485 11797 47141;47142 47141 SAALPIFSSFVSNWDEATK 19 1 0 Unmodified _SAALPIFSSFVSNWDEATK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1036.0144 2 1035.51256 2069.01057 58410.05 0.71931 0.00074485 -0.080329 -8.3182E-05 0.63898 0.00066167 1036.01399561772 1039.51941783202 134.84 0.18834 134.84 134.71 134.9 0 25 3 12 0 0 0 7.2297E-13 2 81665 111.64 102.36 1 0.76828 0.66458 0 234680000 137240000 97440000 30247 1415 11485 11797 47143;47144 47143 SAALPIFSSFVSNWDEATKR 20 1 1 Unmodified _SAALPIFSSFVSNWDEATKR_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.7216 3 742.711171 2225.11168 74229.59 1.2635 0.00093842 -0.28895 -0.00021461 0.97456 0.00072382 743.045136724637 748.718416451248 124.91 0.32629 124.91 124.76 125.08 0 58 23 5 0 0 0 0.030189 1 83170 14.46 11.173 1 0.48103 0.52833 0 4948700 2267200 2681600 30248 1415 11486 11798 47145 47145 SAAPSTLDSSSTAPAQLGK 19 1 0 Unmodified _SAAPSTLDSSSTAPAQLGK_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 898.9597 2 894.952337 1787.89012 64713.09 0.45922 0.00041098 0.17382 0.00015556 0.63304 0.00056654 894.952497115181 898.959365388733 56.586 0.57005 56.586 56.403 56.973 0 227 51 8 0 0 0 2.8028E-08 3 31787 94.551 94.551 1 1.1713 1.2646 0 34856000 15868000 18988000 30249 1794 11487 11799 47146;47147;47148 47146 SAAPSTLDSSSTAPAQLGK 19 1 0 Unmodified _SAAPSTLDSSSTAPAQLGK_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 898.9589 2 894.952337 1787.89012 64747.38 0.38181 0.0003417 0.06986 6.2521E-05 0.45167 0.00040422 894.952412754965 898.959346380355 55.683 0.48161 55.683 55.452 55.934 3.8147E-06 194 34 8 0 0 0 2.1729E-23 2 31906 136.83 128.13 1 1.2263 1.3614 0 49155000 20008000 29147000 30250 1794 11487 11799 47149;47150 47150 SAAPSTLDSSSTAPAQLGK 19 1 0 Unmodified _SAAPSTLDSSSTAPAQLGK_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 899.4615 2 894.952337 1787.89012 64301.44 0.58592 0.00052437 0.39324 0.00035193 0.97915 0.0008763 894.952415487539 899.461466779465 65.933 0.5304 65.933 65.711 66.241 0 208 37 7 0 0 0 3.9727E-05 2 34094 50.843 45.237 1 1.3157 1.038 0 5426000 2303500 3122500 30251 1794 11487 11799 47151;47152 47152 SAAPSTLDSSSTAPAQLGK 19 1 0 Unmodified _SAAPSTLDSSSTAPAQLGK_ 0 0 0 Q549N5;Q9Y5M8;H7C4H2 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 894.952 2 894.952337 1787.89012 64409.3 0.12583 0.00011261 0.63516 0.00056844 0.76099 0.00068105 894.95241454276 898.960694852444 66.57 0.67168 66.57 66.301 66.973 0 236 42 8 0 0 0 0.0053148 2 33703 31.58 25.735 1 1.3043 1.0677 0 4885900 2240800 2645100 30252 1794 11487 11799 47153;47154 47154 SAAQVCLCLGQLER 14 0 1 Unmodified _SAAQVCLCLGQLER_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.3978 2 802.897799 1603.78105 NaN NaN NaN -0.6125 -0.00049177 NaN NaN NaN NaN 93.245 0.20971 93.245 93.161 93.371 0 0 0 0 0.023702 1 57853 42.809 33.122 1 NaN NaN 0 4622200 4622200 0 30253 1260 11488 11800 47155 47155 SAAQVCLCLGQLER 14 0 1 Unmodified _SAAQVCLCLGQLER_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.9012 2 802.897799 1603.78105 67934.93 0.70966 0.00056978 0.29221 0.00023462 1.0019 0.0008044 802.898215260719 807.902154564572 107.79 0.48872 107.79 107.56 108.05 0 96 26 7 0 0 0 0.00086228 2 61747 57.802 41.664 1 1.8196 1.5218 0 3851500 1050600 2800900 30254 1260 11488 11800 47156;47157 47156 SAAQVCLCLGQLER 14 0 1 Unmodified _SAAQVCLCLGQLER_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 808.4045 2 802.897799 1603.78105 70625.88 0.57975 0.00046548 0.14598 0.00011721 0.72573 0.00058269 802.898085583852 807.902034096743 107.71 0.38067 107.71 107.47 107.85 0 95 21 7 0 0 0 0.040068 1 60756 28.283 24.705 1 1.9064 1.6519 0 2680400 915130 1765300 30255 1260 11488 11800 47158 47158 SAATLITHPFHVITLR 16 0 1 Unmodified _SAATLITHPFHVITLR_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3433 3 593.008823 1776.00464 84685.79 0.84787 0.00050279 -0.99283 -0.00058876 -0.14497 -8.5966E-05 593.008496261214 596.67920141605 104.37 0.19979 104.37 104.26 104.46 0 34 14 4 0 0 0 0.025815 1 66096 32.815 32.815 1 1.0313 1.0412 0 5691300 3135200 2556100 30256 2152 11489 11801 47159 47159 SAATLITHPFHVITLR 16 0 1 Unmodified _SAATLITHPFHVITLR_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.6802 3 593.008823 1776.00464 79648.2 0.61449 0.0003644 0.26084 0.00015468 0.87532 0.00051907 593.343101600827 596.345120028948 108.14 0.44867 108.14 107.99 108.44 -7.6294E-06 105 21 8 0 0 0 2.4666E-07 2 61135 97.579 97.579 1 1.4963 1.2151 0 10043000 3710400 6332300 30257 2152 11489 11801 47160;47161 47160 SAATSGAGSTTSGVVSGSLGSR 22 0 1 Unmodified _SAATSGAGSTTSGVVSGSLGSR_ 0 0 0 Q5H924;A0A024R9Y3;A0A024R9U8;A0A024R9W5;Q7Z6Z7 Q5H924 Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 948.9656 2 948.966507 1895.91846 64143.36 0.57704 0.0005476 -0.45533 -0.0004321 0.12171 0.0001155 948.966741431169 954.471169614447 48.977 0.33033 48.977 48.857 49.188 0 98 26 6 0 0 0 1.3768E-07 2 26778 61.265 61.265 1 1.0696 1.1201 0 12618000 3896400 8721300 30258 289 11490 11802 47162;47163 47162 SAATSGAGSTTSGVVSGSLGSR 22 0 1 Unmodified _SAATSGAGSTTSGVVSGSLGSR_ 0 0 0 Q5H924;A0A024R9Y3;A0A024R9U8;A0A024R9W5;Q7Z6Z7 Q5H924 Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 948.9666 2 948.966507 1895.91846 67820.27 0.40746 0.00038666 -0.47216 -0.00044806 -0.0647 -6.1398E-05 948.96553100329 954.471762895139 47.918 0.31638 47.918 47.806 48.123 0 41 20 4 0 0 0 0.0011579 1 26715 34.395 34.395 1 1.079 1.0953 0 5387700 2070300 3317500 30259 289 11490 11802 47164 47164 SAATSGAGSTTSGVVSGSLGSR 22 0 1 Unmodified _SAATSGAGSTTSGVVSGSLGSR_ 0 0 0 Q5H924;A0A024R9Y3;A0A024R9U8;A0A024R9W5;Q7Z6Z7 Q5H924 Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 949.4708 2 948.966507 1895.91846 65901.81 0.5408 0.0005132 0.2264 0.00021484 0.7672 0.00072805 948.966657715783 953.970149305811 57.073 0.39259 57.073 56.865 57.257 0 67 27 5 0 0 0 0.03911 1 28892 21.093 21.093 1 0.62689 0.54296 0 1970800 1176700 794060 30260 289 11490 11802 47165 47165 SAATSGAGSTTSGVVSGSLGSR 22 0 1 Unmodified _SAATSGAGSTTSGVVSGSLGSR_ 0 0 0 Q5H924;A0A024R9Y3;A0A024R9U8;A0A024R9W5;Q7Z6Z7 Q5H924 Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 948.9655 2 948.966507 1895.91846 64097.66 0.49669 0.00047134 -0.34057 -0.00032319 0.15612 0.00014815 948.966545109695 953.970105110318 57.661 0.34093 57.661 57.501 57.842 0 80 24 5 0 0 0 0.041799 1 28633 20.838 20.838 1 0.59102 0.51394 0 1555700 1003200 552490 30261 289 11490 11802 47166 47166 SACQVTAGGSSQCYR 15 0 1 Unmodified _SACQVTAGGSSQCYR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.3496 2 816.348671 1630.68279 68386.89 0.54478 0.00044473 -0.35115 -0.00028666 0.19362 0.00015807 816.348624845396 821.352302670441 23.422 0.30683 23.422 23.292 23.599 0 57 14 5 0 0 0 0.00022439 2 9281 70.54 68.945 1 0.69297 0.69046 0 8632000 3773900 4858100 30262 44 11491 11803 47167;47168 47167 SACQVTAGGSSQCYR 15 0 1 Unmodified _SACQVTAGGSSQCYR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.3516 2 816.348671 1630.68279 69890.26 0.43017 0.00035117 -0.24676 -0.00020144 0.18341 0.00014973 816.348704591823 821.352307800525 23.233 0.25493 23.233 23.084 23.339 0 52 10 7 0 0 0 0.00016862 2 9101 78.324 76.17 1 0.65082 0.64748 0 8205100 5728200 2476800 30263 44 11491 11803 47169;47170 47170 SACQVTAGGSSQCYR 15 0 1 Unmodified _SACQVTAGGSSQCYR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.8514 2 816.348671 1630.68279 66983.63 0.5311 0.00043357 -0.20986 -0.00017131 0.32125 0.00026225 816.348872290917 821.35310309684 26.393 0.36126 26.393 26.211 26.572 0 117 15 10 0 0 0 0.00062694 2 9922 53.448 53.448 1 1.5915 1.3685 0 6741600 2540800 4200800 30264 44 11491 11803 47171;47172 47172 SACQVTAGGSSQCYR 15 0 1 Unmodified _SACQVTAGGSSQCYR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 821.3532 2 816.348671 1630.68279 66808.01 0.47199 0.00038531 -0.41277 -0.00033696 0.059221 4.8345E-05 816.348744424163 821.353100023682 26.56 0.51537 26.56 26.371 26.886 1.9073E-06 124 24 9 0 0 0 0.0025807 1 9542 44.511 44.511 1 1.6312 1.3534 0 5217500 1745100 3472400 30265 44 11491 11803 47173 47173 SADESGQALLAAGHYASDEVR 21 0 1 Unmodified _SADESGQALLAAGHYASDEVR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.0094 3 716.338173 2145.99269 72211.13 0.70898 0.00050787 -0.57426 -0.00041136 0.13472 9.6506E-05 716.336713542351 719.674169378237 90.427 0.44083 90.427 90.244 90.685 0 99 26 7 0 0 0 0.03189 1 50123 15.401 15.401 1 5.7692 4.8714 0 4804500 684920 4119600 30266 523 11492 11804 47174 47174 SADESGQALLAAGHYASDEVR 21 0 1 Unmodified _SADESGQALLAAGHYASDEVR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.0087 3 716.338173 2145.99269 72758.16 0.52076 0.00037304 -0.75232 -0.00053892 -0.23156 -0.00016588 716.670749953478 720.008025861564 90.365 0.42781 90.365 90.16 90.588 0 108 28 6 0 0 0 0.0018685 1 49223 24.732 24.732 1 6.0633 5.1491 0 4628100 1089900 3538200 30267 523 11492 11804 47175 47175 SADFNPDFVFTEK 13 1 0 Unmodified _SADFNPDFVFTEK_ 0 0 0 B3GQE6;Q3MI07;A0A087WYH5;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.859 2 758.851364 1515.68817 69654.28 0.60641 0.00046017 0.44311 0.00033625 1.0495 0.00079643 758.851479917049 762.858592092417 105.5 1.306 105.5 105 106.31 0 458 71 8 0 0 0 8.1533E-06 2 65151 102.4 95.867 1 0.8333 0.93905 0 126710000 67516000 59194000 30268 899;1099 11493 11805 47176;47177 47177 SADFNPDFVFTEK 13 1 0 Unmodified _SADFNPDFVFTEK_ 0 0 0 B3GQE6;Q3MI07;A0A087WYH5;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.3543 2 758.851364 1515.68817 69832.01 0.78083 0.00059253 0.34189 0.00025945 1.1227 0.00085198 758.851468416951 762.858635601217 104.83 0.99586 104.83 104.32 105.32 0 445 78 8 0 0 0 0.00011901 2 66269 76.682 70.24 1 0.81528 0.91779 0 121820000 66734000 55085000 30269 899;1099 11493 11805 47178;47179 47178 SADFNPDFVFTEK 13 1 0 Unmodified _SADFNPDFVFTEK_ 0 0 0 B3GQE6;Q3MI07;A0A087WYH5;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 762.8596 2 758.851364 1515.68817 69736.34 0.46674 0.00035419 0.17628 0.00013377 0.64302 0.00048796 758.851424056246 762.858588255431 116.92 0.8147 116.92 116.61 117.43 0 210 33 11 0 0 0 7.3664E-05 2 68667 94.767 80.861 1 1.1897 1.0079 0 59515000 27469000 32046000 30270 899;1099 11493 11805 47180;47181 47180 SADFNPDFVFTEK 13 1 0 Unmodified _SADFNPDFVFTEK_ 0 0 0 B3GQE6;Q3MI07;A0A087WYH5;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 758.852 2 758.851364 1515.68817 69988.48 0.78681 0.00059707 -0.060104 -4.561E-05 0.72671 0.00055146 758.851267159051 762.858312166509 116.78 0.80229 116.78 116.4 117.21 -7.6294E-06 228 35 10 0 0 0 0.00011522 2 67635 91.313 77.407 1 1.11 0.93385 0 51535000 24743000 26792000 30271 899;1099 11493 11805 47182;47183 47183 SADGSAPAGEGEGVTLQR 18 0 1 Unmodified _SADGSAPAGEGEGVTLQR_ 0 0 0 Q01650 Q01650 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 856.4091 2 851.405554 1700.79656 NaN NaN NaN -0.96305 -0.00081995 NaN NaN NaN NaN 42.379 0.30293 42.379 42.267 42.57 3.8147E-06 0 0 0 9.1592E-06 1 22507 68.171 59.167 1 NaN NaN 0 5147900 0 5147900 30272 1675 11494 11806 47184 47184 SADGSAPAGEGEGVTLQR 18 0 1 Unmodified _SADGSAPAGEGEGVTLQR_ 0 0 0 Q01650 Q01650 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.4109 2 851.405554 1700.79656 NaN NaN NaN 0.91956 0.00078292 NaN NaN NaN NaN 41.679 0.18588 41.679 41.596 41.782 0 0 0 0 1.5069E-09 1 22422 89.43 76.474 1 NaN NaN 0 5751700 0 5751700 30273 1675 11494 11806 47185 47185 SADIALVAGGSR 12 0 1 Unmodified _SADIALVAGGSR_ 0 0 0 C9IY40;Q5T653;B4DVE2 C9IY40 C9IY40 MRPL2 39S ribosomal protein L2, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.8083 2 558.80402 1115.59349 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.281 1 58.281 57.781 58.781 3.8147E-06 0 0 0 0.00070748 1 33035 76.927 57.15 1 30274 1125 11495 11807 47186 47186 SADIALVAGGSR 12 0 1 Unmodified _SADIALVAGGSR_ 0 0 0 C9IY40;Q5T653;B4DVE2 C9IY40 C9IY40 MRPL2 39S ribosomal protein L2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.3013 2 558.80402 1115.59349 79606.68 0.40389 0.00022569 0.006352 3.5495E-06 0.41024 0.00022924 558.804106445026 563.808066253256 57.233 0.6656 57.233 56.865 57.53 3.8147E-06 108 41 4 0 0 0 0.037464 1 33209 34.695 34.695 1 0.74625 0.73777 0 15183000 10301000 4881900 30275 1125 11495 11807 47187 47187 SAEFLLHMLK 10 1 0 Oxidation (M) _SAEFLLHM(ox)LK_ SAEFLLHM(1)LK SAEFLLHM(111.04)LK 0 1 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.8307 2 602.823366 1203.63218 76969.35 0.71053 0.00042832 -0.38702 -0.00023331 0.3235 0.00019502 602.822998336852 606.830092543628 73.855 0.93477 73.855 73.366 74.301 0 377 86 5 0 0 0 1.0956E-06 1 43472 111.04 103.82 1 1.5433 1.7453 0 85269000 32598000 52671000 30276 106 11496 11808 47188 47188 93 SAEFLLHMLK 10 1 0 Oxidation (M) _SAEFLLHM(ox)LK_ SAEFLLHM(1)LK SAEFLLHM(144.12)LK 0 1 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.8237 2 602.823366 1203.63218 76565.22 0.40886 0.00024647 -0.15732 -9.4836E-05 0.25154 0.00015163 602.823244478211 606.830424025367 74.707 1.2211 74.707 74.238 75.459 0 504 99 8 0 0 0 2.6323E-12 2 43830 144.12 113.96 1 1.4354 1.6195 0 110790000 46381000 64408000 30277 106 11496 11808 47189;47190 47189 93 SAEFLLHMLK 10 1 0 Oxidation (M) _SAEFLLHM(ox)LK_ SAEFLLHM(1)LK SAEFLLHM(49.42)LK 0 1 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.8292 2 602.823366 1203.63218 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.329 1 73.329 72.829 73.829 0 0 0 0 0.015167 1 43018 49.418 33.085 1 30278 106 11496 11808 47191 47191 93 SAEFLLHMLK 10 1 0 Oxidation (M) _SAEFLLHM(ox)LK_ SAEFLLHM(1)LK SAEFLLHM(138.06)LK 0 1 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.8304 2 602.823366 1203.63218 76305.52 0.57997 0.00034962 -0.41231 -0.00024855 0.16767 0.00010107 602.823095562503 606.83000579357 72.577 1.5334 72.577 71.893 73.427 0 487 134 5 0 0 0 5.1053E-12 1 43592 138.06 115.32 1 1.4931 1.6787 0 72748000 27639000 45108000 30279 106 11496 11808 47192 47192 93 SAEFLLHMLK 10 1 0 Oxidation (M) _SAEFLLHM(ox)LK_ SAEFLLHM(1)LK SAEFLLHM(43.31)LK 0 1 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 404.8894 3 402.218003 1203.63218 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.251 1 71.251 70.751 71.751 7.6294E-06 0 0 0 0.011352 1 42680 43.308 33.256 1 30280 106 11496 11808 47193 47193 93 SAEFLLHMLK 10 1 0 Oxidation (M) _SAEFLLHM(ox)LK_ SAEFLLHM(1)LK SAEFLLHM(97.43)LK 0 1 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8234 2 602.823366 1203.63218 76426.86 0.46451 0.00028002 -0.27968 -0.0001686 0.18483 0.00011142 602.823240388788 606.830153991472 82.725 1.3406 82.725 82.115 83.456 0 353 79 7 0 0 0 4.7094E-05 4 45036 97.431 81.549 1 0.47267 0.36627 0 12986000 9044500 3941500 30281 106 11496 11808 47194;47195;47196;47197 47195 93 SAEFLLHMLK 10 1 0 Oxidation (M) _SAEFLLHM(ox)LK_ SAEFLLHM(1)LK SAEFLLHM(79.91)LK 0 1 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.8303 2 602.823366 1203.63218 77668.47 0.47532 0.00028654 -0.23238 -0.00014009 0.24294 0.00014645 602.82328239923 606.83009493663 84.12 1.7484 84.12 83.456 85.204 0 457 134 5 0 0 0 0.00042132 1 45863 79.906 77.373 1 0.55032 0.42715 0 14439000 10023000 4415400 30282 106 11496 11808 47198 47198 93 SAEFLLHMLK 10 1 0 Oxidation (M) _SAEFLLHM(ox)LK_ SAEFLLHM(1)LK SAEFLLHM(95.1)LK 0 1 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8234 2 602.823366 1203.63218 76560.11 0.80876 0.00048754 -0.48572 -0.00029281 0.32304 0.00019473 602.823480607939 606.829612608958 111.58 1.071 111.58 111.32 112.39 -7.6294E-06 258 61 8 0 0 0 8.1635E-05 2 64605 95.099 84.389 1 0.95692 0.77466 0 23425000 12425000 11000000 30283 106 11496 11808 47199;47200 47199 93 SAEFLLHMLK 10 1 0 Oxidation (M) _SAEFLLHM(ox)LK_ SAEFLLHM(1)LK SAEFLLHM(69.95)LK 0 1 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 606.8304 2 602.823366 1203.63218 77035.51 0.50172 0.00030245 -0.25229 -0.00015209 0.24943 0.00015036 602.823148195157 606.830105593813 82.668 1.3385 82.668 82.062 83.4 0 336 77 6 0 0 0 0.0010893 4 44398 69.954 64.172 1 0.46618 0.38482 0 11315000 8003800 3311100 30284 106 11496 11808 47201;47202;47203;47204 47203 93 SAEFLLHMLK 10 1 0 Oxidation (M) _SAEFLLHM(ox)LK_ SAEFLLHM(1)LK SAEFLLHM(57.59)LK 0 1 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 606.8299 2 602.823366 1203.63218 77559.62 0.73653 0.000444 -0.74719 -0.00045042 -0.010659 -6.4253E-06 602.82304245196 606.829698275938 83.925 1.6077 83.925 83.4 85.008 0 368 118 5 0 0 0 0.0035479 1 44928 57.59 57.59 1 0.53263 0.43978 0 11400000 7270500 4129400 30285 106 11496 11808 47205 47205 93 SAEFLLHMLK 10 1 0 Oxidation (M) _SAEFLLHM(ox)LK_ SAEFLLHM(1)LK SAEFLLHM(58.68)LK 0 1 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.8228 2 602.823366 1203.63218 77854.7 0.64075 0.00038626 -0.39485 -0.00023803 0.2459 0.00014823 602.823276680545 606.830149581955 111.25 1.2107 111.25 110.9 112.11 7.6294E-06 212 64 10 0 0 0 0.0031608 2 63414 58.676 58.676 1 0.97224 0.77985 0 22000000 11797000 10203000 30286 106 11496 11808 47206;47207 47206 93 SAEFLLHMLK 10 1 0 Unmodified _SAEFLLHMLK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.826 2 594.825909 1187.63727 NaN NaN NaN -0.076766 -4.5662E-05 NaN NaN NaN NaN 99.43 0.60693 99.43 99.337 99.944 0 0 0 0 2.9959E-11 1 62408 122.52 91.443 1 NaN NaN 0 19208000 19208000 0 30287 106 11496 11809 47208 47208 SAEFLLHMLK 10 1 0 Unmodified _SAEFLLHMLK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.8268 2 594.825909 1187.63727 78350.05 0.81401 0.00048419 0.70286 0.00041808 1.5169 0.00090227 594.826222998721 598.833442441391 111.58 2.1544 111.58 111.13 113.29 0 420 113 9 0 0 0 1.621E-09 2 64581 131.06 104.37 1 1.0158 0.85857 0 57691000 29492000 28199000 30288 106 11496 11809 47209;47210 47210 SAEFLLHMLK 10 1 0 Unmodified _SAEFLLHMLK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.8267 2 594.825909 1187.63727 77270.09 0.65604 0.00039023 0.39828 0.00023691 1.0543 0.00062714 594.826038437241 598.833192374512 111.25 1.353 111.25 110.86 112.22 -7.6294E-06 398 71 10 0 0 0 8.7248E-10 2 63384 134.26 107.57 1 1.0157 0.86384 0 79148000 39753000 39395000 30289 106 11496 11809 47211;47212 47212 SAEFLLHMLK 10 1 0 Unmodified _SAEFLLHMLK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 399.5578 3 396.886365 1187.63727 96842.09 0.094975 3.7694E-05 -0.10087 -4.0036E-05 -0.0058988 -2.3411E-06 396.886230661361 399.557702176483 111.24 0.54887 111.24 111.01 111.56 0 115 26 6 0 0 0 0.060696 1 63458 20.777 19.11 1 0.98599 0.80658 0 5508100 2739000 2769200 30290 106 11496 11809 47213 47213 SAEHYTETALDEIR 14 0 1 Unmodified _SAEHYTETALDEIR_ 0 0 0 Q96SB4;H3BLV9;A0A024RCU9;D6RBM8 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.8906 2 817.886466 1633.75838 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.98 1 64.98 64.48 65.48 0 0 0 0 0.010784 1 37388 50.95 35.684 1 30291 1988 11497 11810 47214 47214 SAELPDAVGPIVQLQEK 17 1 0 Unmodified _SAELPDAVGPIVQLQEK_ 0 0 0 F5GYT7;F5H5U6;F5H8C8;F5GXS8;F5GYM3;H0YG47;Q96PU8 F5GYT7 F5GYT7 QKI Protein quaking ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.994 2 897.485816 1792.95708 NaN NaN NaN 0.36963 0.00033174 NaN NaN NaN NaN 107.77 0.30065 107.77 107.65 107.95 -7.6294E-06 0 0 0 0.012034 2 67143 42.095 25.563 1 NaN NaN 0 3790400 0 3790400 30292 1256 11498 11811 47215;47216 47216 SAELPDAVGPIVQLQEK 17 1 0 Unmodified _SAELPDAVGPIVQLQEK_ 0 0 0 F5GYT7;F5H5U6;F5H8C8;F5GXS8;F5GYM3;H0YG47;Q96PU8 F5GYT7 F5GYT7 QKI Protein quaking ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.4935 2 897.485816 1792.95708 NaN NaN NaN -0.50244 -0.00045093 NaN NaN NaN NaN 107.26 0.29884 107.26 107.1 107.4 7.6294E-06 0 0 0 0.0015172 2 68481 57.802 45.588 1 NaN NaN 0 4714500 0 4714500 30293 1256 11498 11811 47217;47218 47218 SAELVGTFVSPEVFLK 16 1 0 Unmodified _SAELVGTFVSPEVFLK_ 0 0 0 Q86Y56;B3KU91;H0Y650 Q86Y56 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.9766 2 861.969271 1721.92399 NaN NaN NaN 0.038656 3.332E-05 NaN NaN NaN NaN 126.12 0.49592 126.12 125.82 126.31 -7.6294E-06 0 0 0 9.2566E-05 1 81942 76.522 59.497 1 NaN NaN 0 4378000 0 4378000 30294 1888 11499 11812 47219 47219 SAEPGTETPQVNLSDLK 17 1 0 Unmodified _SAEPGTETPQVNLSDLK_ 0 0 0 B2RWP5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.4493 2 893.446888 1784.87922 NaN NaN NaN -0.25195 -0.00022511 NaN NaN NaN NaN 84.334 0.2023 84.334 84.248 84.45 0 0 0 0 2.9375E-08 1 50524 92.856 70.984 1 NaN NaN 0 3113700 3113700 0 30295 898 11500 11813 47220 47220 SAEPGTETPQVNLSDLK 17 1 0 Unmodified _SAEPGTETPQVNLSDLK_ 0 0 0 B2RWP5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.4545 2 893.446888 1784.87922 NaN NaN NaN -2.312 -0.0020656 NaN NaN NaN NaN 84.344 0.13087 84.344 84.282 84.413 0 0 0 0 0.0046834 1 50560 51.013 34.381 1 NaN NaN 0 2384100 0 2384100 30296 898 11500 11813 47221 47221 SAEPGTETPQVNLSDLK 17 1 0 Unmodified _SAEPGTETPQVNLSDLK_ 0 0 0 B2RWP5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.4581 2 893.446888 1784.87922 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.369 1 83.369 82.869 83.869 0 0 0 0 0.00057057 1 51084 58.098 41.845 1 30297 898 11500 11813 47222 47222 SAEPGTETPQVNLSDLK 17 1 0 Unmodified _SAEPGTETPQVNLSDLK_ 0 0 0 B2RWP5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.4484 2 893.446888 1784.87922 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.371 1 83.371 82.871 83.871 0 0 0 0 0.0001583 1 51086 78.529 59.429 1 30298 898 11500 11813 47223 47223 SAEPGTETPQVNLSDLK 17 1 0 Unmodified _SAEPGTETPQVNLSDLK_ 0 0 0 B2RWP5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 893.9503 2 893.446888 1784.87922 64500.2 0.70347 0.00062851 -0.50123 -0.00044782 0.20224 0.00018069 893.94819302294 897.45339889918 97.127 0.54916 97.127 96.818 97.367 7.6294E-06 103 27 7 0 0 0 0.010839 1 54540 31.228 30.538 1 2.405 1.9303 0 2855200 986820 1868400 30299 898 11500 11813 47224 47224 SAFLQAFLGR 10 0 1 Unmodified _SAFLQAFLGR_ 0 0 0 Q8IXI1 Q8IXI1 Q8IXI1 RHOT2 Mitochondrial Rho GTPase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.313 2 555.308741 1108.60293 84846.37 0.76004 0.00042205 0.12429 6.902E-05 0.88433 0.00049107 555.308601530882 560.312861206499 113 0.47644 113 112.78 113.25 0 86 33 4 0 0 0 0.0011282 2 71376 75.738 75.738 1 1.3176 1.3795 0 4549100 1899000 2650100 30300 1893 11501 11814 47225;47226 47225 SAFLQAFLGR 10 0 1 Unmodified _SAFLQAFLGR_ 0 0 0 Q8IXI1 Q8IXI1 Q8IXI1 RHOT2 Mitochondrial Rho GTPase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.81 2 555.308741 1108.60293 84233.79 0.77038 0.0004278 -0.20112 -0.00011168 0.56927 0.00031612 555.308696224377 560.312648441819 112.3 0.4037 112.3 112.07 112.47 0 108 30 5 0 0 0 0.0032796 2 72649 65.246 59.485 1 1.1866 1.196 0 6476300 3346900 3129400 30301 1893 11501 11814 47227;47228 47228 SAGEEEDGPVLTDEQK 16 1 0 Unmodified _SAGEEEDGPVLTDEQK_ 0 0 0 F5GYV5;H7BZV4;B2RE15;A0A0C4DG62;F8WCT1;F5H7X4;Q8TEM4;Q66PJ3 F5GYV5 F5GYV5 ARL6IP4;FLJ00169 ADP-ribosylation factor-like protein 6-interacting protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.8851 2 852.383953 1702.75335 66456.58 0.68856 0.00058692 -0.16061 -0.0001369 0.52795 0.00045002 852.885394969034 856.390679626597 39.573 0.36861 39.573 39.337 39.706 0 122 31 6 0 0 0 2.6425E-18 3 20489 136.7 121.82 1 0.67331 0.69925 0 11404000 6968600 4435800 30302 510 11502 11815 47229;47230;47231 47231 SAGEEEDGPVLTDEQK 16 1 0 Unmodified _SAGEEEDGPVLTDEQK_ 0 0 0 F5GYV5;H7BZV4;B2RE15;A0A0C4DG62;F8WCT1;F5H7X4;Q8TEM4;Q66PJ3 F5GYV5 F5GYV5 ARL6IP4;FLJ00169 ADP-ribosylation factor-like protein 6-interacting protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.3835 2 852.383953 1702.75335 67380.38 0.73759 0.00062871 0.13424 0.00011442 0.87183 0.00074314 852.383951372753 856.89291463875 38.55 0.37405 38.55 38.374 38.748 0 127 32 6 0 0 0 2.0507E-12 2 20199 121.21 108.2 1 0.80574 0.81947 0 16849000 8793900 8055200 30303 510 11502 11815 47232;47233 47232 SAGEEEDGPVLTDEQK 16 1 0 Unmodified _SAGEEEDGPVLTDEQK_ 0 0 0 F5GYV5;H7BZV4;B2RE15;A0A0C4DG62;F8WCT1;F5H7X4;Q8TEM4;Q66PJ3 F5GYV5 F5GYV5 ARL6IP4;FLJ00169 ADP-ribosylation factor-like protein 6-interacting protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 852.3848 2 852.383953 1702.75335 66673.46 0.56741 0.00048365 -0.073819 -6.2922E-05 0.49359 0.00042073 852.383803565447 856.391208972214 45.495 0.43031 45.495 45.231 45.661 0 145 30 7 0 0 0 0.001879 2 21737 43.297 40.169 1 0.51425 0.40629 0 3055300 2095300 959980 30304 510 11502 11815 47234;47235 47235 SAGEEEDGPVLTDEQK 16 1 0 Unmodified _SAGEEEDGPVLTDEQK_ 0 0 0 F5GYV5;H7BZV4;B2RE15;A0A0C4DG62;F8WCT1;F5H7X4;Q8TEM4;Q66PJ3 F5GYV5 F5GYV5 ARL6IP4;FLJ00169 ADP-ribosylation factor-like protein 6-interacting protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 852.8857 2 852.383953 1702.75335 66238.49 0.71457 0.00060909 -0.0084335 -7.1886E-06 0.70614 0.0006019 852.383901196313 856.391307777378 45.632 0.58168 45.632 45.422 46.004 3.8147E-06 163 37 6 0 0 0 0.00023358 1 21275 58.32 52.134 1 0.55734 0.44872 0 2512500 1657400 855100 30305 510 11502 11815 47236 47236 SAGGLMFNTGIGQHILK 17 1 0 Oxidation (M) _SAGGLM(ox)FNTGIGQHILK_ SAGGLM(1)FNTGIGQHILK SAGGLM(49.46)FNTGIGQHILK 0 1 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2;D6RCL3 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.3149 3 587.310173 1758.90869 84737.44 0.60027 0.00035254 -0.66765 -0.00039212 -0.067383 -3.9574E-05 587.309827977393 590.314980096329 88.203 0.47219 88.203 88.01 88.482 0 105 35 6 0 0 0 5.3941E-05 1 53108 49.463 44.994 1 1.2362 1.2624 0 14286000 7673400 6612500 30306 786 11503 11816 47237 47237 627 SAGGLMFNTGIGQHILK 17 1 0 Oxidation (M) _SAGGLM(ox)FNTGIGQHILK_ SAGGLM(1)FNTGIGQHILK SAGGLM(73.21)FNTGIGQHILK 0 1 0 A8K9K8;Q9UNQ2;A0A0C4DGB1;B4DRY2;D6RCL3 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.3149 3 587.310173 1758.90869 80940.51 0.34104 0.0002003 -0.28575 -0.00016783 0.055284 3.2469E-05 587.644309669035 589.982056830551 86.984 0.52488 86.984 86.719 87.244 0 111 43 4 0 0 0 1.6831E-05 1 53619 73.208 73.208 1 1.4935 1.6167 0 22053000 9497400 12556000 30307 786 11503 11816 47238 47238 627 SAGNAVWLNR 10 0 1 Unmodified _SAGNAVWLNR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.2954 2 544.285797 1086.55704 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.845 1 50.845 50.345 51.345 0 0 0 0 4.7729E-05 1 28098 87.639 62.864 1 30308 1293 11504 11817 47239 47239 SAGNAVWLNR 10 0 1 Unmodified _SAGNAVWLNR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.2892 2 544.285797 1086.55704 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.895 1 50.895 50.395 51.395 0 0 0 0 3.6334E-06 1 28129 104.44 73.148 1 30309 1293 11504 11817 47240 47240 SAGNAVWLNR 10 0 1 Unmodified _SAGNAVWLNR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.2911 2 544.285797 1086.55704 80549.22 0.39154 0.00021311 1.7847 0.00097138 2.1762 0.0011845 544.787243125743 549.290816483653 49.581 0.28589 49.581 49.487 49.773 -3.8147E-06 55 21 4 0 0 0 1.1859E-05 1 27904 103.83 72.604 1 2.7914 2.8131 0 10606000 2524300 8081200 30310 1293 11504 11817 47241 47241 SAGQGEVLVYVEDPAGHQEEAK 22 1 0 Unmodified _SAGQGEVLVYVEDPAGHQEEAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.377 3 771.704633 2312.09207 68620.06 0.82223 0.00063452 0.18302 0.00014124 1.0052 0.00077576 772.038736420471 774.71045970063 76.103 0.53944 76.103 75.818 76.357 0 270 44 8 0 0 0 1.2472E-08 2 44711 70.453 70.453 1 1.6326 1.7605 0 34206000 12456000 21750000 30311 1504 11505 11818 47242;47243 47242 SAGQGEVLVYVEDPAGHQEEAK 22 1 0 Unmodified _SAGQGEVLVYVEDPAGHQEEAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.3761 3 771.704633 2312.09207 NaN NaN NaN 0.33148 0.0002558 NaN NaN NaN NaN 74.93 0.58182 74.93 74.692 75.274 0 0 0 0 1.4372E-09 1 45032 77.045 68.757 1 NaN NaN 0 28093000 0 28093000 30312 1504 11505 11818 47244 47244 SAGQGEVLVYVEDPAGHQEEAK 22 1 0 Unmodified _SAGQGEVLVYVEDPAGHQEEAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.0394 3 771.704633 2312.09207 69167.66 0.7172 0.00055347 0.093317 7.2013E-05 0.81052 0.00062548 772.038938842142 774.710360341339 87.419 0.63489 87.419 87.103 87.738 -7.6294E-06 220 35 10 0 0 0 4.2628E-06 2 47211 47.392 47.392 1 3.0043 2.4669 0 9331200 2559800 6771500 30313 1504 11505 11818 47245;47246 47246 SAGVQCFGPTAEAAQLESSK 20 1 0 Unmodified _SAGVQCFGPTAEAAQLESSK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1023.4918 2 1019.48094 2036.94732 60526.01 0.018379 1.8737E-05 0.21563 0.00021983 0.23401 0.00023857 1019.98293861272 1023.4881879207 81.429 0.63869 81.429 81.102 81.741 0 269 55 7 0 0 0 2.9718E-06 2 48354 63.128 63.128 1 2.5084 2.4624 0 23019000 7156100 15863000 30314 1507 11506 11819 47247;47248 47247 SAGVQCFGPTAEAAQLESSK 20 1 0 Unmodified _SAGVQCFGPTAEAAQLESSK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1019.9839 2 1019.48094 2036.94732 61127.73 0.20372 0.00020769 0.31343 0.00031953 0.51715 0.00052722 1019.48143324802 1023.48833534345 80.583 0.58275 80.583 80.22 80.803 0 223 47 7 0 0 0 2.0225E-09 1 48985 97.45 97.45 1 2.3418 2.4041 0 25391000 7397500 17993000 30315 1507 11506 11819 47249 47249 SAGVQCFGPTAEAAQLESSK 20 1 0 Unmodified _SAGVQCFGPTAEAAQLESSK_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1023.4886 2 1019.48094 2036.94732 59476.38 0.34764 0.00035441 0.6504 0.00066308 0.99804 0.0010175 1019.9825750226 1023.49093321204 93.731 0.78075 93.731 93.457 94.238 -7.6294E-06 239 52 8 0 0 0 0.02237 1 51448 23.008 23.008 1 1.4169 1.156 0 6368000 2270300 4097700 30316 1507 11506 11819 47250 47250 SAHFSTLAIK 10 1 0 Unmodified _SAHFSTLAIK_ 0 0 0 C9JZL3;Q9H5T3;B4DTL6;O15294 C9JZL3 C9JZL3 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.8012 2 537.800749 1073.58694 86983.04 0.73744 0.0003966 0.79383 0.00042692 1.5313 0.00082352 537.801408796175 541.808084788697 48.234 0.52963 48.234 48.028 48.558 3.8147E-06 114 43 4 0 0 0 0.0037219 1 26259 63.227 52.962 1 1.425 1.4874 0 15018000 6308400 8709500 30317 1034 11507 11820 47251 47251 SAHIQASGHLEEQTPR 16 0 1 Unmodified _SAHIQASGHLEEQTPR_ 0 0 0 H3BTR4;B3KPB2;Q96BT3;H3BUW2;A8K662;H3BQJ0;I3L4F8 H3BTR4 H3BTR4 CENPT Centromere protein T MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.9617 3 587.627329 1759.86016 79472.4 0.34014 0.00019987 -0.12667 -7.4433E-05 0.21347 0.00012544 587.627160449208 590.963406901642 23.278 0.28036 23.278 23.155 23.435 0 42 12 5 0 0 0 6.4494E-09 2 9178 100.77 100.77 1 0.82639 0.82298 0 16460000 9849500 6610100 30318 920 11508 11821 47252;47253 47253 SAHIQASGHLEEQTPR 16 0 1 Unmodified _SAHIQASGHLEEQTPR_ 0 0 0 H3BTR4;B3KPB2;Q96BT3;H3BUW2;A8K662;H3BQJ0;I3L4F8 H3BTR4 H3BTR4 CENPT Centromere protein T MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 591.2988 3 587.627329 1759.86016 77670.75 0.44165 0.00025953 0.4843 0.00028459 0.92595 0.00054412 587.961873690389 590.963608375714 26.712 0.39524 26.712 26.483 26.878 1.9073E-06 67 17 7 0 0 0 0.0065813 1 10184 28.032 28.032 1 1.3072 1.1076 0 2933300 803670 2129700 30319 920 11508 11821 47254 47254 SAHIQASGHLEEQTPR 16 0 1 Unmodified _SAHIQASGHLEEQTPR_ 0 0 0 H3BTR4;B3KPB2;Q96BT3;H3BUW2;A8K662;H3BQJ0;I3L4F8 H3BTR4 H3BTR4 CENPT Centromere protein T MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.9637 3 587.627329 1759.86016 80138.9 0.3033 0.00017823 0.52824 0.00031041 0.83154 0.00048864 587.627549031092 591.29790192483 26.589 0.368 26.589 26.435 26.803 1.9073E-06 65 17 7 0 0 0 0.00083957 1 9574 39.657 39.657 1 1.4309 1.2436 0 2640100 969600 1670500 30320 920 11508 11821 47255 47255 SAHLQWMVVR 10 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)SAHLQWM(ox)VVR_ SAHLQWM(1)VVR SAHLQWM(95.5)VVR 1 1 0 P46779;H0YKD8;H0YLP6;H0YMF4 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8344 2 642.829514 1283.64448 72851.28 0.44843 0.00028827 0.29252 0.00018804 0.74095 0.0004763 642.829795487898 647.833803248043 81.485 1.0301 81.485 81.066 82.096 0 533 88 9 0 0 0 9.988E-05 2 48436 95.502 95.502 1 1.1292 1.3353 0 271770000 126650000 145120000 30321 1572 11509 11822 47256;47257 47256 1353 SAHLQWMVVR 10 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)SAHLQWM(ox)VVR_ SAHLQWM(1)VVR SAHLQWM(128.86)VVR 1 1 0 P46779;H0YKD8;H0YLP6;H0YMF4 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.8345 2 642.829514 1283.64448 73816.3 0.68223 0.00043856 0.058382 3.7529E-05 0.74061 0.00047609 642.829684946813 647.833706324285 80.353 1.0849 80.353 79.939 81.024 0 469 86 9 0 0 0 1.3665E-09 2 48881 128.86 128.86 1 1.1726 1.3461 0 188120000 85663000 102460000 30322 1572 11509 11822 47258;47259 47258 1353 SAHLQWMVVR 10 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)SAHLQWM(ox)VVR_ SAHLQWM(1)VVR SAHLQWM(58.68)VVR 1 1 0 P46779;H0YKD8;H0YLP6;H0YMF4 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.8301 2 642.829514 1283.64448 75004.35 0.64969 0.00041764 0.49963 0.00032118 1.1493 0.00073882 642.830144457782 647.833623343299 93.254 1.2232 93.254 92.846 94.069 0 363 81 8 0 0 0 0.0041723 1 51910 58.676 58.676 1 0.54423 0.44926 0 18934000 12443000 6491200 30323 1572 11509 11822 47260 47260 1353 SAHLQWMVVR 10 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)SAHLQWM(ox)VVR_ SAHLQWM(1)VVR SAHLQWM(60.97)VVR 1 1 0 P46779;H0YKD8;H0YLP6;H0YMF4 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.8339 2 642.829514 1283.64448 76607.39 0.79998 0.00051425 -0.030688 -1.9727E-05 0.7693 0.00049453 642.829399795686 647.833618680034 110.36 0.49596 110.36 110.12 110.62 -7.6294E-06 125 26 6 0 0 0 0.0030922 1 63702 60.973 56.813 1 0.96116 0.81819 0 5427600 2694800 2732900 30324 1572 11509 11822 47261 47261 1353 SAHLQWMVVR 10 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)SAHLQWM(ox)VVR_ SAHLQWM(1)VVR SAHLQWM(66.43)VVR 1 1 0 P46779;H0YKD8;H0YLP6;H0YMF4 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.8298 2 642.829514 1283.64448 74594.84 0.44791 0.00028793 0.38365 0.00024662 0.83156 0.00053455 642.830022111234 647.833711770292 93.132 1.1165 93.132 92.679 93.796 0 336 73 8 0 0 0 0.0019309 1 50991 66.435 66.435 1 0.51445 0.43393 0 17710000 10503000 7207000 30325 1572 11509 11822 47262 47262 1353 SAHLQWMVVR 10 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)SAHLQWM(ox)VVR_ SAHLQWM(1)VVR SAHLQWM(59.25)VVR 1 1 0 P46779;H0YKD8;H0YLP6;H0YMF4 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.834 2 642.829514 1283.64448 77141.95 0.78848 0.00050686 0.030854 1.9834E-05 0.81933 0.00052669 642.82962323317 647.833656798188 110.16 0.5231 110.16 109.9 110.42 0 128 28 6 0 0 0 0.0039048 2 62629 59.245 54.043 1 0.97134 0.85901 0 4009800 1669000 2340800 30326 1572 11509 11822 47263;47264 47264 1353 SAHLQWMVVR 10 0 1 Acetyl (Protein N-term) _(ac)SAHLQWMVVR_ 1 0 0 P46779;H0YKD8;H0YLP6;H0YMF4 P46779 P46779 RPL28 60S ribosomal protein L28 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3337 2 634.832057 1267.64956 NaN NaN NaN 0.068447 4.3452E-05 NaN NaN NaN NaN 97.429 0.75425 97.429 97.044 97.798 0 0 0 0 0.013078 1 59349 67.081 54.454 1 NaN NaN 0 12201000 12201000 0 30327 1572 11509 11823 47265 47265 SAHLQWMVVR 10 0 1 Acetyl (Protein N-term) _(ac)SAHLQWMVVR_ 1 0 0 P46779;H0YKD8;H0YLP6;H0YMF4 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.8368 2 634.832057 1267.64956 76527.3 0.70403 0.00044694 -0.024965 -1.5848E-05 0.67906 0.00043109 634.832149266115 639.836215480403 110.35 0.85726 110.35 109.82 110.68 7.6294E-06 208 40 9 0 0 0 0.0010675 2 63688 83.647 83.647 1 1.0356 0.84524 0 15555000 7973900 7581100 30328 1572 11509 11823 47266;47267 47267 SAHLQWMVVR 10 0 1 Acetyl (Protein N-term) _(ac)SAHLQWMVVR_ 1 0 0 P46779;H0YKD8;H0YLP6;H0YMF4 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.8327 2 634.832057 1267.64956 75093.4 0.78409 0.00049777 -0.17625 -0.00011189 0.60784 0.00038588 634.832029590587 639.836168575619 110.15 0.8412 110.15 109.65 110.49 0 203 42 8 0 0 0 0.00064991 2 62602 87.913 87.913 1 0.95627 0.79749 0 15935000 8142800 7792500 30329 1572 11509 11823 47268;47269 47269 SAHTLGPTPSR 11 0 1 Unmodified _SAHTLGPTPSR_ 0 0 0 Q13428 Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 375.1998 3 375.2 1122.57817 97426.88 -0.24788 -9.3004E-05 0.44695 0.0001677 0.19907 7.4692E-05 375.199904497093 378.536264003494 19.179 0.33837 19.179 18.998 19.336 0 33 14 5 0 0 0 0.021717 1 5656 23.028 23.028 1 1.0286 1.0422 0 20140000 9776600 10363000 30330 1712 11510 11824 47270 47270 SAHTLVGPTPSR 12 0 1 Unmodified _SAHTLVGPTPSR_ 0 0 0 E7ETY2 E7ETY2 E7ETY2 TCOF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8344 2 611.830569 1221.64658 77668.49 0.27009 0.00016525 -0.25297 -0.00015477 0.017126 1.0478E-05 611.830417825114 616.834641452961 25.189 0.32321 25.189 25.088 25.411 0 48 14 5 0 0 0 3.5535E-06 1 10869 111.06 94.281 1 0.6476 0.64778 0 16431000 9549400 6882000 30331 1225 11511 11825 47271 47271 SAHTLVGPTPSR 12 0 1 Unmodified _SAHTLVGPTPSR_ 0 0 0 E7ETY2 E7ETY2 E7ETY2 TCOF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.2226 3 408.222805 1221.64658 93539.63 0.030414 1.2416E-05 -0.027822 -1.1358E-05 0.0025914 1.0579E-06 408.222796423781 411.558850368351 24.894 0.42874 24.894 24.655 25.084 0 66 16 6 0 0 0 4.1032E-05 3 10564 93.839 83.609 1 0.80711 0.92303 0 87938000 46381000 41557000 30332 1225 11511 11825 47272;47273;47274 47274 SAHTLVGPTPSR 12 0 1 Unmodified _SAHTLVGPTPSR_ 0 0 0 E7ETY2 E7ETY2 E7ETY2 TCOF1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.8309 2 611.830569 1221.64658 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.924 1 24.924 24.424 25.424 0 0 0 0 0.00046366 1 10589 79.974 57.234 1 30333 1225 11511 11825 47275 47275 SAHTLVGPTPSR 12 0 1 Unmodified _SAHTLVGPTPSR_ 0 0 0 E7ETY2 E7ETY2 E7ETY2 TCOF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.8352 2 611.830569 1221.64658 77982.17 0.41137 0.00025169 0.1888 0.00011552 0.60017 0.0003672 611.830500388469 616.834833514161 27.766 0.33725 27.766 27.585 27.923 0 54 12 7 0 0 0 0.00024531 1 10893 73.841 73.841 1 1.8474 1.5433 0 3308300 1177000 2131300 30334 1225 11511 11825 47276 47276 SAHTLVGPTPSR 12 0 1 Unmodified _SAHTLVGPTPSR_ 0 0 0 E7ETY2 E7ETY2 E7ETY2 TCOF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.8345 2 611.830569 1221.64658 77926.76 0.14305 8.7524E-05 0.22802 0.00013951 0.37108 0.00022704 611.830135633967 616.834690600524 27.724 0.36402 27.724 27.549 27.913 -1.9073E-06 59 14 7 0 0 0 0.00023548 2 10340 85.958 81.175 1 1.9618 1.6881 0 2776600 797470 1979200 30335 1225 11511 11825 47277;47278 47277 SAHVTVSGGTPK 12 1 0 Unmodified _SAHVTVSGGTPK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.8048 2 570.80402 1139.59349 82506.91 0.615 0.00035104 0.77022 0.00043965 1.3852 0.00079069 570.803840468462 574.810904811417 18.441 0.20735 18.441 18.332 18.539 0 19 7 5 0 0 0 8.9107E-18 1 5368 141.1 121.31 1 0.24007 0.23814 0 8186600 6314000 1872500 30336 2014 11512 11826 47279 47279 SAHVTVSGGTPK 12 1 0 Unmodified _SAHVTVSGGTPK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.8045 2 570.80402 1139.59349 NaN NaN NaN 0.56879 0.00032467 NaN NaN NaN NaN 18.368 0.1501 18.368 18.285 18.435 0 0 0 0 0.037332 1 5093 44.863 29.201 1 NaN NaN 0 4555100 4555100 0 30337 2014 11512 11826 47280 47280 SAHVTVSGGTPK 12 1 0 Unmodified _SAHVTVSGGTPK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.8044 2 570.80402 1139.59349 79277.16 0.011609 6.6262E-06 0.47574 0.00027155 0.48735 0.00027818 570.80426119062 574.811696963291 19.201 0.21872 19.201 19.109 19.328 1.9073E-06 26 9 5 0 0 0 0.041943 1 4569 33.961 33.961 1 0.42533 0.37395 0 1119700 733920 385800 30338 2014 11512 11826 47281 47281 SAIDENQLSR 10 0 1 Unmodified _SAIDENQLSR_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6;H0YMN5 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.7894 2 566.783284 1131.55202 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.741 1 31.741 31.241 32.241 0 0 0 0 0.001394 1 15681 68.893 26.784 1 30339 288 11513 11827 47282 47282 SAIDLTPIVVEDK 13 1 0 Unmodified _SAIDLTPIVVEDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8898 2 700.387582 1398.76061 72629.48 0.76938 0.00053886 -0.10033 -7.0269E-05 0.66905 0.00046859 700.387448944953 704.394468772177 103.51 0.85199 103.51 102.98 103.83 7.6294E-06 430 69 8 0 0 0 9.5096E-06 2 63664 100.69 100.69 1 0.73855 0.85775 0 247850000 145030000 102810000 30340 515 11514 11828 47283;47284 47284 SAIDLTPIVVEDK 13 1 0 Unmodified _SAIDLTPIVVEDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.3881 2 700.387582 1398.76061 71980.47 1.0165 0.00071192 -0.066195 -4.6362E-05 0.95027 0.00066556 700.387501579502 704.394547589963 102.77 0.86932 102.77 102.24 103.11 0 442 68 9 0 0 0 3.8666E-09 2 64773 121.36 121.36 1 0.75684 0.88834 0 340900000 190200000 150700000 30341 515 11514 11828 47285;47286 47286 SAIDLTPIVVEDK 13 1 0 Unmodified _SAIDLTPIVVEDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 700.3879 2 700.387582 1398.76061 72665.88 0.98907 0.00069273 -0.27391 -0.00019184 0.71516 0.00050089 700.387669995993 704.394387209446 115.33 0.57767 115.33 114.99 115.57 -7.6294E-06 162 27 9 0 0 0 0.0001575 2 67530 86.313 86.313 1 1.6227 1.2947 0 20041000 7423400 12617000 30342 515 11514 11828 47287;47288 47288 SAIDLTPIVVEDK 13 1 0 Unmodified _SAIDLTPIVVEDK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.3951 2 700.387582 1398.76061 72639.48 0.66658 0.00046687 0.012854 9.0029E-06 0.67944 0.00047587 700.387797351993 704.394622523055 115.18 0.50243 115.18 114.87 115.37 0 158 24 9 0 0 0 1.6448E-05 2 66442 99.522 99.522 1 1.6817 1.3468 0 21661000 7940800 13720000 30343 515 11514 11828 47289;47290 47289 SAIDLTPIVVEDKEEK 16 2 0 Unmodified _SAIDLTPIVVEDKEEK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 601.3314 3 595.98753 1784.94076 76283.33 0.60117 0.00035829 0.87688 0.00052261 1.478 0.0008809 596.321900973456 601.331407783797 99.216 0.65868 99.216 98.893 99.551 0 227 40 8 0 0 0 0.0010401 1 55149 41.695 37.791 1 2.3791 2.0131 0 14020000 4861500 9158600 30344 515 11515 11829 47291 47291 SAILQENSTLSASNK 15 1 0 Unmodified _SAILQENSTLSASNK_ 0 0 0 B3KMX7;Q498Y2;H0YLB7;H0YKU8;Q6JHV3;H0YMI4;Q9Y6I4;B4DWJ6;Q9Y2R8 B3KMX7 B3KMX7 USP3 Ubiquitinyl hydrolase 1;Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.4145 2 781.904659 1561.79476 71040.95 0.3843 0.00030049 0.058927 4.6076E-05 0.44323 0.00034656 781.904464407041 785.911570730919 52.256 0.50019 52.256 52.01 52.51 0 106 37 4 0 0 0 0.00022244 1 29062 67.519 67.519 1 0.92063 0.91231 0 8243200 4637500 3605700 30345 910 11516 11830 47292 47292 SAILQENSTLSASNK 15 1 0 Unmodified _SAILQENSTLSASNK_ 0 0 0 B3KMX7;Q498Y2;H0YLB7;H0YKU8;Q6JHV3;H0YMI4;Q9Y6I4;B4DWJ6;Q9Y2R8 B3KMX7 B3KMX7 USP3 Ubiquitinyl hydrolase 1;Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.4147 2 781.904659 1561.79476 71821.88 1.1027 0.00086224 -0.75716 -0.00059202 0.34559 0.00027022 781.903783502688 785.911185433881 50.894 0.28756 50.894 50.756 51.044 3.8147E-06 66 22 5 0 0 0 0.00022032 1 28722 64.224 56.658 1 0.85709 0.85814 0 15637000 8005800 7631600 30346 910 11516 11830 47293 47293 SAILQENSTLSASNK 15 1 0 Unmodified _SAILQENSTLSASNK_ 0 0 0 B3KMX7;Q498Y2;H0YLB7;H0YKU8;Q6JHV3;H0YMI4;Q9Y6I4;B4DWJ6;Q9Y2R8 B3KMX7 B3KMX7 USP3 Ubiquitinyl hydrolase 1;Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 785.9089 2 781.904659 1561.79476 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.886 1 60.886 60.386 61.386 0 0 0 0 0.04516 1 30521 40.025 17.107 1 30347 910 11516 11830 47294 47294 SAINEVVTR 9 0 1 Unmodified _SAINEVVTR_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.7783 2 494.774731 987.534909 85979.74 0.3127 0.00015472 -0.21106 -0.00010443 0.10164 5.0291E-05 494.774887599805 499.778578952374 40.385 0.93409 40.385 39.922 40.857 0 418 81 10 0 0 0 6.1013E-06 2 21061 131.44 35.698 1 0.78916 0.93967 0 1850500000 988580000 861880000 30348 825 11517 11831 47295;47296 47296 SAINEVVTR 9 0 1 Unmodified _SAINEVVTR_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7746 2 494.774731 987.534909 85873.01 0.26639 0.0001318 -0.21144 -0.00010462 0.054953 2.7189E-05 494.774942020065 499.778572060011 39.363 0.894 39.363 39.008 39.902 0 415 76 9 0 0 0 0.0010216 3 20747 91.085 38.299 1 0.76164 0.9056 0 2349600000 1285000000 1064600000 30349 825 11517 11831 47297;47298;47299 47298 SAINEVVTR 9 0 1 Unmodified _SAINEVVTR_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.7788 2 494.774731 987.534909 85116.01 0.10807 5.3472E-05 -0.096869 -4.7928E-05 0.011205 5.5441E-06 494.774937872587 499.778626478551 46.083 1.1607 46.083 45.751 46.912 0 482 80 10 0 0 0 0.00044654 2 22024 99.136 35.135 1 0.79117 0.68545 0 156030000 89448000 66582000 30350 825 11517 11831 47300;47301 47301 SAINEVVTR 9 0 1 Unmodified _SAINEVVTR_ 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.7752 2 494.774731 987.534909 85250.63 0.016344 8.0866E-06 -0.19377 -9.5873E-05 -0.17743 -8.7786E-05 494.774932077932 499.778505276731 46.102 1.184 46.102 45.688 46.872 0 449 72 11 0 0 0 0.0014178 2 21524 85.67 46.708 1 0.81873 0.71494 0 151140000 80839000 70302000 30351 825 11517 11831 47302;47303 47303 SAIYQLEEEYENLLK 15 1 0 Unmodified _SAIYQLEEEYENLLK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.4695 2 921.462007 1840.90946 63134.55 0.90783 0.00083653 0.21969 0.00020243 1.1275 0.001039 921.461969657642 925.46891478693 125.96 0.54913 125.96 125.77 126.31 0 194 40 7 0 0 0 0.00022681 1 81922 96.604 96.604 1 0.51377 0.53452 0 11542000 7709800 3832200 30352 1486 11518 11832 47304 47304 SAIYQLEEEYENLLK 15 1 0 Unmodified _SAIYQLEEEYENLLK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.963 2 921.462007 1840.90946 63660.59 0.84559 0.00077918 0.0095484 8.7985E-06 0.85514 0.00078798 921.461888760317 925.468950775456 125.54 0.70642 125.54 125.33 126.03 0 200 46 8 0 0 0 0.00022148 1 83569 66.023 66.023 1 0.49744 0.50699 0 12215000 8280600 3934200 30353 1486 11518 11832 47305 47305 SALAFLNR 8 0 1 Unmodified _SALAFLNR_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8VWY4;F8VWX0;F8W0L1;F8VZ66;F8VV47;F8VVE5;F8VQZ5;F8VV37;F8W1E5;Q9BZ74;F8VYH6;F8W1T4;F8VQF5 B2RE34 B2RE34 RACGAP1;FKSG42 Rac GTPase-activating protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.26 2 446.255977 890.497401 92890.3 0.09936 4.434E-05 0.3023 0.00013491 0.40166 0.00017925 446.256083757516 451.260223274239 77.283 0.81802 77.283 76.943 77.761 0 246 67 5 0 0 0 0.019676 2 46776 58.981 18.588 1 0.85595 0.85735 0 18636000 9412400 9223800 30354 68 11519 11833 47306;47307 47306 SALDEYRK 8 1 1 Unmodified _SALDEYRK_ 0 0 1 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.265 2 491.253631 980.49271 85591.38 0.22387 0.00010998 0.4507 0.00022141 0.67456 0.00033138 491.254226684579 500.265164085235 21.142 0.6263 21.142 20.763 21.389 0 92 28 7 0 0 0 0.023269 1 7405 64.265 37.662 1 1.3707 1.5174 0 18892000 9133000 9758800 30355 87 11520 11834 47308 47308 SALDEYRK 8 1 1 Unmodified _SALDEYRK_ 0 0 1 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 491.2539 2 491.253631 980.49271 86839.84 0.014426 7.0869E-06 0.51425 0.00025263 0.52868 0.00025971 491.25374807187 500.264920850741 22.839 0.46014 22.839 22.597 23.057 -1.9073E-06 67 15 6 0 0 0 0.025327 1 7493 61.962 32.586 1 1.278 1.05 0 5018100 2069300 2948700 30356 87 11520 11834 47309 47309 SALEEFSK 8 1 0 Unmodified _SALEEFSK_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q59G16 Q59G16 SMARCC2 SWI/SNF complex subunit SMARCC2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.7371 2 455.729458 909.444362 NaN NaN NaN 0.31617 0.00014409 NaN NaN NaN NaN 42.829 0.31071 42.829 42.686 42.997 0 0 0 0 0.049746 1 22899 50.04 28.74 1 NaN NaN 0 5836200 0 5836200 30357 321 11521 11835 47310 47310 SALFAQINQGESITHALK 18 1 0 Unmodified _SALFAQINQGESITHALK_ 0 0 0 B4DNY3;B4DUZ8;B4DNW7;B4DNA3;B4DI38;D3DPU2;B2RDY9 B4DNY3 B4DNY3 CAP1 Adenylyl cyclase-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.6813 3 643.346052 1927.01633 75945.48 0.78381 0.00050426 0.015088 9.7068E-06 0.7989 0.00051397 643.346103522002 646.351796210018 108.59 0.94643 108.59 108.46 109.41 0 100 46 7 0 0 0 0.0002294 2 62427 41.348 41.348 1 1.1981 0.93924 0 3186500 1132000 2054500 30358 893 11522 11836 47311;47312 47311 SALFAQINQGESITHALK 18 1 0 Unmodified _SALFAQINQGESITHALK_ 0 0 0 B4DNY3;B4DUZ8;B4DNW7;B4DNA3;B4DI38;D3DPU2;B2RDY9 B4DNY3 B4DNY3 CAP1 Adenylyl cyclase-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.3519 3 643.346052 1927.01633 77875.58 0.64379 0.00041418 -0.052849 -3.4E-05 0.59094 0.00038018 643.346515205864 646.017395085157 108.46 0.44569 108.46 108.26 108.71 0 75 22 7 0 0 0 0.0083904 1 61399 23.435 23.435 1 1.0433 0.81466 0 3436900 1667500 1769400 30359 893 11522 11836 47313 47313 SALGFIK 7 1 0 Unmodified _SALGFIK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 372.2308 2 368.223614 734.432676 101026.3 -0.020174 -7.4286E-06 -0.064912 -2.3902E-05 -0.085086 -3.1331E-05 368.223389881687 372.23065013962 66.881 0.72565 66.881 66.581 67.307 0 152 54 4 0 0 0 0.032919 1 38518 64.776 34.706 1 1.39 1.3665 0 20080000 8230700 11849000 30360 907 11523 11837 47314 47314 SALGFIK 7 1 0 Unmodified _SALGFIK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 372.2308 2 368.223614 734.432676 100879.4 0.2238 8.241E-05 -0.34537 -0.00012717 -0.12157 -4.4765E-05 368.223311319658 372.230568647829 65.399 0.6732 65.399 65.16 65.833 0 183 55 6 0 0 0 0.032919 2 38489 64.776 37.46 1 1.2835 1.361 0 20393000 9127900 11265000 30361 907 11523 11837 47315;47316 47315 SALHSSVPK 9 1 0 Unmodified _SALHSSVPK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.2584 2 463.258717 924.50288 88511.6 0.25104 0.0001163 -0.040533 -1.8777E-05 0.21051 9.752E-05 463.258533852423 467.265780101749 18.464 0.29366 18.464 18.279 18.572 0 46 11 6 0 0 0 0.00085808 1 5339 93.374 68.555 1 0.80337 0.78853 0 22957000 12327000 10630000 30362 1224 11524 11838 47317 47317 SALLDFYMK 9 1 0 Oxidation (M) _SALLDFYM(ox)K_ SALLDFYM(1)K SALLDFYM(70.92)K 0 1 0 E1NZA1;Q92616;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.2825 2 552.275718 1102.53688 82790.43 0.59528 0.00032876 -0.29384 -0.00016228 0.30143 0.00016647 552.275291342207 556.28260632901 89.011 0.17165 89.011 88.929 89.101 0 29 11 5 0 0 0 0.0018333 1 53720 70.919 50.36 1 2.5011 2.501 0 18812000 5002700 13809000 30363 1205 11525 11839 47318 47318 915 SALLDPDWVCPPCR 14 0 1 Unmodified _SALLDPDWVCPPCR_ 0 0 0 A8K8X5;A0A024RA51;Q96GN5 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.3918 2 843.39235 1684.77015 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.84 1 105.84 105.34 106.34 0 0 0 0 0.013821 1 67297 48.44 30.172 1 30364 295 11526 11840 47319 47319 SALQELEELK 10 1 0 Unmodified _SALQELEELK_ 0 0 0 B4DL80;G5EA36;P30260;I3L394 B4DL80 B4DL80 CDC27 Cell division cycle protein 27 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.3216 2 580.313886 1158.61322 84409.43 0.74477 0.0004322 1.1861 0.00068832 1.9309 0.0011205 580.314824751121 584.320890290211 91.717 0.46095 91.717 91.579 92.04 0 98 38 4 0 0 0 1.4776E-05 1 55529 101.64 66.348 1 0.52945 0.56228 0 15808000 9111700 6696100 30365 995 11527 11841 47320 47320 SALQILFSEDSTK 13 1 0 Unmodified _SALQILFSEDSTK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8826 2 719.874839 1437.73512 69459.59 0.80649 0.00058057 0.19607 0.00014115 1.0026 0.00072172 719.874574864261 723.881826403846 106.59 0.93071 106.59 106.21 107.14 0 369 69 7 0 0 0 2.1946E-14 2 66038 137.01 137.01 1 0.8415 0.95261 0 100730000 54862000 45872000 30366 1955 11528 11842 47321;47322 47322 SALQILFSEDSTK 13 1 0 Unmodified _SALQILFSEDSTK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.8745 2 719.874839 1437.73512 69602.92 0.8539 0.0006147 0.35172 0.0002532 1.2056 0.00086789 719.874691945952 723.882039026656 105.95 0.99173 105.95 105.48 106.47 0 377 73 7 0 0 0 1.7286E-13 4 67120 130.56 130.56 1 0.84836 0.97755 0 181520000 100100000 81422000 30367 1955 11528 11842 47323;47324;47325;47326 47324 SALQILFSEDSTK 13 1 0 Unmodified _SALQILFSEDSTK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.8824 2 719.874839 1437.73512 70251.98 0.94817 0.00068256 0.071631 5.1566E-05 1.0198 0.00073413 719.874749763569 723.882002835848 118.24 1.0105 118.24 117.82 118.83 0 211 45 9 0 0 0 9.8454E-19 2 69753 142.1 142.1 1 1.1509 0.94216 0 35281000 16810000 18471000 30368 1955 11528 11842 47327;47328 47328 SALQILFSEDSTK 13 1 0 Unmodified _SALQILFSEDSTK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YWK2;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.8826 2 719.874839 1437.73512 70651.55 0.65227 0.00046955 -0.034439 -2.4792E-05 0.61783 0.00044476 719.874698573757 723.881839804623 117.98 0.81525 117.98 117.71 118.52 -7.6294E-06 201 37 8 0 0 0 1.599E-13 2 68658 131.12 131.12 1 1.2236 1.015 0 35618000 15575000 20043000 30369 1955 11528 11842 47329;47330 47330 SALQTEIANLLK 12 1 0 Unmodified _SALQTEIANLLK_ 0 0 0 A0A0K0TMT7;A0A0K0TMT5;A0A0K0TMV9;G3V5N7;Q76MY9;G3V2V7;Q6FG41;P01100 A0A0K0TMT7 A0A0K0TMT7 FOS Proto-oncogene c-Fos ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.8769 2 650.877185 1299.73982 NaN NaN NaN -0.49153 -0.00031992 NaN NaN NaN NaN 118.22 0.43156 118.22 118.04 118.47 0 0 0 0 0.029594 1 75908 47.706 35.659 1 NaN NaN 0 1884700 1884700 0 30370 540 11529 11843 47331 47331 SALQTEIANLLK 12 1 0 Unmodified _SALQTEIANLLK_ 0 0 0 A0A0K0TMT7;A0A0K0TMT5;A0A0K0TMV9;G3V5N7;Q76MY9;G3V2V7;Q6FG41;P01100 A0A0K0TMT7 A0A0K0TMT7 FOS Proto-oncogene c-Fos MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.8784 2 650.877185 1299.73982 78748.23 1.1488 0.0007477 -0.26978 -0.00017559 0.87899 0.00057211 650.877051226178 654.883937092916 117.73 0.3532 117.73 117.48 117.83 -7.6294E-06 54 22 4 0 0 0 0.0043375 1 77201 53.751 45.17 1 0.65444 0.65167 0 5728900 3544400 2184500 30371 540 11529 11843 47332 47332 SALQVLVSILK 11 1 0 Unmodified _SALQVLVSILK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.884 2 585.876456 1169.73836 79485.98 0.75479 0.00044221 -0.22905 -0.00013419 0.52574 0.00030802 585.876173681973 589.883376746634 132.96 0.78851 132.96 132.6 133.39 0 153 33 6 0 0 0 0.00011828 2 86741 96.342 90.037 1 0.96671 0.99897 0 17216000 9311400 7904500 30372 1565 11530 11844 47333;47334 47333 SALQVLVSILK 11 1 0 Unmodified _SALQVLVSILK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.8766 2 585.876456 1169.73836 79236.35 0.95007 0.00055662 -0.2696 -0.00015795 0.68046 0.00039867 585.876187635324 589.88332790477 132.43 1.0838 132.43 132.05 133.13 0 255 61 7 0 0 0 0.00011828 3 88530 96.342 84.89 1 0.91816 0.99348 0 22022000 10911000 11111000 30373 1565 11530 11844 47335;47336;47337 47336 SALSCVISK 9 1 0 Unmodified _SALSCVISK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.7676 2 482.760235 963.505917 NaN NaN NaN 0.26874 0.00012974 NaN NaN NaN NaN 49.121 0.41726 49.121 48.912 49.329 0 0 0 0 0.024253 1 27616 55.549 37.701 1 NaN NaN 0 11853000 0 11853000 30374 2103 11531 11845 47338 47338 SALSGHLETVILGLLK 16 1 0 Unmodified _SALSGHLETVILGLLK_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.4128 2 825.99308 1649.97161 67957.35 0.99298 0.00082019 -0.27313 -0.0002256 0.71985 0.00059459 826.494166410816 830.000287313385 133.09 0.13423 133.09 132.99 133.13 0 15 4 5 0 0 0 3.9495E-06 1 87041 88.187 88.187 1 0.90041 0.91296 0 5921400 3214700 2706800 30375 193 11532 11846 47339 47339 SALSGHLETVILGLLK 16 1 0 Unmodified _SALSGHLETVILGLLK_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.6696 3 550.997812 1649.97161 80075.59 0.8796 0.00048466 -0.33478 -0.00018446 0.54482 0.00030019 550.997705141011 553.669025048267 133.09 0.18817 133.09 132.97 133.16 0 37 6 9 0 0 0 6.4592E-45 2 87053 163.8 163.8 1 1.1729 1.2719 0 44900000 20878000 24022000 30376 193 11532 11846 47340;47341 47340 SALSGHLETVILGLLK 16 1 0 Unmodified _SALSGHLETVILGLLK_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.9977 3 550.997812 1649.97161 80221.28 0.7137 0.00039325 -0.38586 -0.00021261 0.32784 0.00018064 550.997620466482 553.668978288049 133.04 0.21756 133.04 132.91 133.13 0 52 9 10 0 0 0 2.62E-34 2 89211 156.5 156.5 1 1.2223 1.3732 0 74217000 34722000 39495000 30377 193 11532 11846 47342;47343 47342 SALSGHLETVILGLLK 16 1 0 Unmodified _SALSGHLETVILGLLK_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YKL9 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.0002 2 825.99308 1649.97161 68406.87 0.95387 0.00078789 -0.11544 -9.5355E-05 0.83842 0.00069253 825.992795852574 830.501605845134 133.04 0.14311 133.04 132.96 133.11 0 24 5 7 0 0 0 8.5522E-09 1 89241 117.2 117.2 1 1.4061 1.4134 0 13610000 5600000 8009600 30378 193 11532 11846 47344 47344 SALTVQFVQGIFVEK 15 1 0 Unmodified _SALTVQFVQGIFVEK_ 0 0 0 A0A024RB87;P61224;F5H6R7;F5H004;F5GX62;Q9BXV4;E7ESV4;F5H7Y6;Q5U0C3;A8KAH9;P62834;F5H4H0;F5GYH7;F5H077;F5GWU8;F5H491;F5H0B7;F5H500;A0A075B6Q0;F5GYB5;A0A0J9YXB3;A6NIZ1;F8WBC0 A0A024RB87 A0A024RB87 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A;Ras-related protein Rap-1b-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.4708 2 833.464155 1664.91376 NaN NaN NaN -0.040748 -3.3962E-05 NaN NaN NaN NaN 122.16 0.49107 122.16 121.9 122.39 -7.6294E-06 0 0 0 0.018045 1 81062 43.991 34.803 1 NaN NaN 0 5626400 0 5626400 30379 329 11533 11847 47345 47345 SANAEDAQEFSDVER 15 0 1 Unmodified _SANAEDAQEFSDVER_ 0 0 0 Q9HCY8 Q9HCY8 Q9HCY8 S100A14 Protein S100-A14 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.3606 2 834.360812 1666.70707 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.784 1 48.784 48.284 49.284 0 0 0 0 0.0012697 1 26666 59.227 50.223 1 30380 2054 11534 11848 47346 47346 SANNTPENSPNFPNFR 16 0 1 Unmodified _SANNTPENSPNFPNFR_ 0 0 0 D3DS96;Q9NRL2;Q59G54;B3KND8 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 908.4188 2 903.413714 1804.81287 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.592 1 70.592 70.092 71.092 -7.6294E-06 0 0 0 0.04493 1 42177 39.266 30.077 1 30381 1187 11535 11849 47347 47347 SAPDTQERPPVR 12 0 2 Unmodified _SAPDTQERPPVR_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.8576 2 676.84949 1351.68443 73670.4 0.49734 0.00033663 -0.061399 -4.1558E-05 0.43594 0.00029507 676.849349250199 686.857839414641 20.064 0.37873 20.064 19.966 20.345 0 53 11 8 0 0 0 3.0398E-07 2 6599 112.71 75.162 1 1.3594 1.4826 0 131880000 50320000 81557000 30382 1914 11536 11850 47348;47349 47349 SAPDTQERPPVR 12 0 2 Unmodified _SAPDTQERPPVR_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.569 3 451.568752 1351.68443 88872.73 0.050073 2.2611E-05 0.79744 0.0003601 0.84751 0.00038271 451.568763714668 458.241681057869 20.085 0.54301 20.085 19.828 20.371 1.9073E-06 77 16 8 0 0 0 4.048E-09 1 6570 99.752 77.724 1 1.4356 1.5661 0 146360000 59666000 86697000 30383 1914 11536 11850 47350 47350 SAPDTQERPPVR 12 0 2 Unmodified _SAPDTQERPPVR_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.8577 2 676.84949 1351.68443 74328.16 0.40762 0.0002759 -0.22663 -0.00015339 0.18099 0.0001225 676.849294248551 686.857632361369 20.006 0.41024 20.006 19.814 20.224 0 94 15 10 0 0 0 0.00098864 2 6254 75.378 55.075 1 1.1889 1.3947 0 124930000 55736000 69196000 30384 1914 11536 11850 47351;47352 47351 SAPDTQERPPVR 12 0 2 Unmodified _SAPDTQERPPVR_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.2406 3 451.568752 1351.68443 87891.13 0.01853 8.3677E-06 -0.31813 -0.00014366 -0.2996 -0.00013529 451.568659560155 458.240718191775 19.997 0.79354 19.997 19.657 20.45 1.9073E-06 131 30 9 0 0 0 7.3699E-13 1 6306 107.85 107.85 1 1.3904 1.645 0 174270000 74905000 99364000 30385 1914 11536 11850 47353 47353 SAPDTQERPPVR 12 0 2 Unmodified _SAPDTQERPPVR_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 458.241 3 451.568752 1351.68443 87236.26 -0.19049 -8.6019E-05 -0.16603 -7.4975E-05 -0.35652 -0.00016099 451.56872740743 458.240848199986 21.706 0.55174 21.706 21.41 21.962 0 136 19 10 0 0 0 0.0047864 2 6591 36.847 33.529 1 1.5748 1.2848 0 37885000 15722000 22163000 30386 1914 11536 11850 47354;47355 47354 SAPDTQERPPVR 12 0 2 Unmodified _SAPDTQERPPVR_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.8499 2 676.84949 1351.68443 73816.42 0.18819 0.00012737 0.20665 0.00013987 0.39484 0.00026725 676.849614951876 686.857882736822 21.697 0.52772 21.697 21.41 21.938 0 118 18 9 0 0 0 0.030703 1 6617 50.292 28.829 1 1.5179 1.2632 0 17666000 6798700 10867000 30387 1914 11536 11850 47356 47356 SAPDTQERPPVR 12 0 2 Unmodified _SAPDTQERPPVR_ 0 0 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 451.5688 3 451.568752 1351.68443 87519.63 -0.37554 -0.00016958 0.16999 7.6763E-05 -0.20555 -9.2818E-05 451.568844295233 458.241005272284 21.626 0.65303 21.626 21.291 21.944 -1.9073E-06 161 24 10 0 0 0 0.039277 3 6139 20.383 11.984 1 1.5601 1.4498 0 26969000 10710000 16258000 30388 1914 11536 11850 47357;47358;47359 47359 SAPFFIPTIPGLVPR 15 0 1 Unmodified _SAPFFIPTIPGLVPR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.4713 2 806.466501 1610.91845 67346.13 0.68686 0.00055393 0.32385 0.00026117 1.0107 0.0008151 806.466567782841 811.470737089802 133.52 0.17754 133.52 133.46 133.64 0 24 3 11 0 0 0 4.0894E-05 3 87545 86.463 86.463 1 0.95931 1.1351 0 323990000 164700000 159280000 30389 486 11537 11851 47360;47361;47362 47361 SAPFFIPTIPGLVPR 15 0 1 Unmodified _SAPFFIPTIPGLVPR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.4716 2 806.466501 1610.91845 67551.82 0.55473 0.00044737 0.73812 0.00059527 1.2928 0.0010426 806.467012547984 811.471135465572 133.5 0.33052 133.5 133.3 133.63 0 27 7 10 0 0 0 0.000342 2 89766 59.542 59.542 1 1.0252 1.1876 0 287200000 142340000 144860000 30390 486 11537 11851 47363;47364 47363 SAPFFIPTIPGLVPR 15 0 1 Unmodified _SAPFFIPTIPGLVPR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.4714 2 806.466501 1610.91845 68100.94 0.74796 0.00060321 0.6189 0.00049912 1.3669 0.0011023 806.467351481137 811.470820919975 134.91 0.19633 134.91 134.8 135 0 18 3 8 0 0 0 0.00022046 2 82619 64.439 64.439 1 1.4011 1.2074 0 66130000 28713000 37416000 30391 486 11537 11851 47365;47366 47365 SAPFFIPTIPGLVPR 15 0 1 Unmodified _SAPFFIPTIPGLVPR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 811.9734 2 806.466501 1610.91845 67040.26 0.93223 0.00075182 1.0535 0.00084958 1.9857 0.0016014 806.969404897263 811.471258928951 134.86 0.19141 134.86 134.76 134.95 0 17 3 7 0 0 0 0.0002222 1 81687 67.153 67.153 1 1.5346 1.3393 0 78751000 32865000 45886000 30392 486 11537 11851 47367 47367 SAPGGILDLNK 11 1 0 Unmodified _SAPGGILDLNK_ 0 0 0 B7Z1I8;Q53YM3;Q53FX2;Q6Q9Z7;Q53F82;A0A0S2Z3K8;O75461 B7Z1I8 B7Z1I8 E2F6 Transcription factor E2F6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.8051 2 542.803488 1083.59242 81015.34 0.18969 0.00010296 -1.5409 -0.00083642 -1.3512 -0.00073345 543.303720869902 546.810910306325 71.4 0.36764 71.4 71.167 71.535 0 77 27 6 0 0 0 0.0066279 1 42808 54.066 28.492 1 0.97498 1.0091 0 9768600 5276100 4492500 30393 552 11538 11852 47368 47368 SAPLEIGLQR 10 0 1 Unmodified _SAPLEIGLQR_ 0 0 0 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.3165 2 542.31148 1082.60841 85673.58 0.62476 0.00033881 0.26203 0.0001421 0.88678 0.00048091 542.31133819453 547.315643996952 73.009 0.47503 73.009 72.825 73.3 0 105 41 6 0 0 0 0.00033362 2 42749 89.698 60.536 1 1.5927 1.6293 0 33089000 12965000 20123000 30394 1851 11539 11853 47369;47370 47369 SAPLEIGLQR 10 0 1 Unmodified _SAPLEIGLQR_ 0 0 0 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3172 2 542.31148 1082.60841 87521.01 0.16656 9.033E-05 0.56107 0.00030428 0.72764 0.00039461 542.311548526634 547.316017501497 71.618 0.28709 71.618 71.513 71.8 0 80 21 7 0 0 0 0.0036548 2 42907 63.534 40.596 1 1.7607 1.9366 0 40797000 12207000 28590000 30395 1851 11539 11853 47371;47372 47371 SAPLEIGLQR 10 0 1 Unmodified _SAPLEIGLQR_ 0 0 0 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.3156 2 542.31148 1082.60841 86331.85 0.49608 0.00026903 -0.3897 -0.00021134 0.10638 5.7688E-05 542.311032086092 547.315365740237 83.344 0.3253 83.344 83.19 83.515 0 59 18 4 0 0 0 0.035164 1 45445 40.724 28.197 1 1.9502 1.6628 0 2806200 915880 1890300 30396 1851 11539 11853 47373 47373 SAPLEIGLQR 10 0 1 Unmodified _SAPLEIGLQR_ 0 0 0 Q6P1J9;A0A1B0GUB2;B4DV47 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.3152 2 542.31148 1082.60841 83239.67 0.63927 0.00034668 -0.90378 -0.00049013 -0.26451 -0.00014345 542.310956622417 547.315044624316 83.468 0.34412 83.468 83.293 83.637 0 59 18 5 0 0 0 0.038692 1 44684 39.305 26.777 1 1.9597 1.6756 0 2875700 1043500 1832300 30397 1851 11539 11853 47374 47374 SAPTAPTPPPPPPPATPR 18 0 1 Unmodified _SAPTAPTPPPPPPPATPR_ 0 0 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 875.4711 2 874.970136 1747.92572 67125.02 0.42708 0.00037368 0.032271 2.8236E-05 0.45935 0.00040192 874.969696324466 879.974632384451 62.857 0.61064 62.857 62.597 63.208 0 167 58 4 0 0 0 6.7984E-05 2 36096 52.576 52.576 1 0.76434 0.79685 0 13356000 8175700 5180200 30398 681 11540 11854 47375;47376 47376 SAPTAPTPPPPPPPATPR 18 0 1 Unmodified _SAPTAPTPPPPPPPATPR_ 0 0 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 875.4709 2 874.970136 1747.92572 66335.07 0.54187 0.00047412 0.056991 4.9866E-05 0.59886 0.00052399 875.471181978744 880.476119419982 61.797 0.628 61.797 61.556 62.184 -3.8147E-06 252 58 6 0 0 0 3.12E-05 1 36103 65.563 59.956 1 0.72236 0.77122 0 24723000 15278000 9445000 30399 681 11540 11854 47377 47377 SAPVMLTLSDSK 12 1 0 Oxidation (M) _SAPVM(ox)LTLSDSK_ SAPVM(1)LTLSDSK SAPVM(52.39)LTLSDSK 0 1 0 A0A024R9B5;B4DMM7;Q15291;B4DLF8 A0A024R9B5 A0A024R9B5 RBBP5 Retinoblastoma-binding protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.8253 2 632.826303 1263.63805 80561.25 0.2143 0.00013561 -0.91944 -0.00058185 -0.70514 -0.00044623 632.825254278925 636.833283991002 65.011 0.34788 65.011 64.812 65.16 0 101 27 6 0 0 0 0.0023601 1 38325 52.391 52.391 1 0.93671 0.97893 0 19291000 10581000 8710500 30400 272 11541 11855 47378 47378 206 SAQAFTHLK 9 1 0 Unmodified _SAQAFTHLK_ 0 0 0 Q9UBU9 Q9UBU9 Q9UBU9 NXF1 Nuclear RNA export factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.7792 2 501.771991 1001.52943 89862.1 0.49347 0.00024761 0.067884 3.4062E-05 0.56136 0.00028167 502.273524949412 505.778880005819 25.947 0.22117 25.947 25.781 26.002 0 51 15 4 0 0 0 0.011904 1 11383 57.96 57.96 1 1.3563 1.4169 0 10921000 6086600 4834400 30401 2099 11542 11856 47379 47379 SAQFEHTLLVTDTGCEILTR 20 0 1 Unmodified _SAQFEHTLLVTDTGCEILTR_ 0 0 0 P53582;Q5CZ91;H0Y955;H0Y903 P53582 P53582 METAP1;DKFZp781C0419 Methionine aminopeptidase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.7178 3 764.382725 2290.12635 70687.75 0.87753 0.00067077 0.45529 0.00034801 1.3328 0.0010188 764.717132432854 767.719264664671 111.82 0.33334 111.82 111.64 111.97 -7.6294E-06 104 20 8 0 0 0 0.0017361 2 64819 27.739 27.739 1 0.47229 0.40562 0 8073200 4542800 3530400 30402 1605 11543 11857 47380;47381 47380 SAQFEHTLLVTDTGCEILTR 20 0 1 Unmodified _SAQFEHTLLVTDTGCEILTR_ 0 0 0 P53582;Q5CZ91;H0Y955;H0Y903 P53582 P53582 METAP1;DKFZp781C0419 Methionine aminopeptidase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 764.3843 3 764.382725 2290.12635 70165.03 0.73824 0.0005643 0.2783 0.00021273 1.0165 0.00077703 764.716888355426 767.718917354061 111.64 0.36188 111.64 111.47 111.83 0 103 22 7 0 0 0 4.9552E-05 2 63779 40.158 40.158 1 0.57033 0.46748 0 8884800 5245300 3639500 30403 1605 11543 11857 47382;47383 47382 SAQIADLQQK 10 1 0 Unmodified _SAQIADLQQK_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.2981 2 551.29857 1100.58259 NaN NaN NaN 0.30029 0.00016555 NaN NaN NaN NaN 32.837 0.72495 32.837 32.679 33.404 -3.8147E-06 0 0 0 1.536E-11 1 16316 126.62 72.072 1 NaN NaN 0 38307000 38307000 0 30404 1803 11544 11858 47384 47384 SAQIADLQQK 10 1 0 Unmodified _SAQIADLQQK_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.2978 2 551.29857 1100.58259 81272.91 0.66487 0.00036654 -0.035923 -1.9804E-05 0.62895 0.00034674 551.298504996543 555.30548279442 32.385 1.1415 32.385 32.009 33.151 0 391 108 6 0 0 0 5.1419E-10 2 16002 135.79 110.9 1 0.88923 0.98791 0 50017000 23695000 26323000 30405 1803 11544 11858 47385;47386 47385 SAQIADLQQK 10 1 0 Unmodified _SAQIADLQQK_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.3055 2 551.29857 1100.58259 81913.13 0.36757 0.00020264 0.16453 9.0703E-05 0.5321 0.00029335 551.298483653041 555.305626752467 37.784 1.1474 37.784 37.131 38.278 0 400 91 8 0 0 0 4.7334E-08 1 16971 116.37 101.43 1 1.5964 1.2718 0 9788600 3782900 6005700 30406 1803 11544 11858 47387 47387 SAQIADLQQK 10 1 0 Unmodified _SAQIADLQQK_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.3058 2 551.29857 1100.58259 80183.38 0.33201 0.00018304 0.17677 9.7451E-05 0.50878 0.00028049 551.298482312555 555.305647407984 37.833 1.2645 37.833 37.175 38.44 0 430 101 6 0 0 0 0.00023762 2 16477 92.838 84.257 1 1.584 1.2958 0 8388400 3344900 5043500 30407 1803 11544 11858 47388;47389 47389 SAQQEASADVATPK 14 1 0 Unmodified _SAQQEASADVATPK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.8446 2 701.84407 1401.67359 72295.37 0.48184 0.00033818 0.031588 2.217E-05 0.51343 0.00036035 701.84415250884 705.85130534843 25.808 0.45262 25.808 25.578 26.031 1.9073E-06 90 23 6 0 0 0 1.7562E-37 2 11344 164.9 164.9 1 1.1295 1.2712 0 72816000 35504000 37312000 30408 1945 11545 11859 47390;47391 47391 SAQQEASADVATPK 14 1 0 Unmodified _SAQQEASADVATPK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.8438 2 701.84407 1401.67359 72667.54 1.1645 0.00081732 -0.0051588 -3.6207E-06 1.1594 0.0008137 701.844177484042 705.851139779952 25.497 0.37426 25.497 25.328 25.702 0 86 17 8 0 0 0 1.7779E-57 2 11065 196.24 177 1 1.2609 1.4114 0 83459000 35757000 47702000 30409 1945 11545 11859 47392;47393 47392 SAQQEASADVATPK 14 1 0 Unmodified _SAQQEASADVATPK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.8442 2 701.84407 1401.67359 72766.28 0.46639 0.00032733 0.0028814 2.0223E-06 0.46927 0.00032935 701.844156429891 705.851194232021 29.418 0.66016 29.418 29.181 29.841 -1.9073E-06 259 45 9 0 0 0 3.394E-06 2 12024 102.66 102.66 1 1.8696 1.5154 0 24993000 8804800 16188000 30410 1945 11545 11859 47394;47395 47395 SAQQEASADVATPK 14 1 0 Unmodified _SAQQEASADVATPK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.8515 2 701.84407 1401.67359 71749.31 0.17575 0.00012335 0.23428 0.00016443 0.41003 0.00028778 701.84427314959 705.851350336221 29.685 0.69035 29.685 29.427 30.117 1.9073E-06 255 43 10 0 0 0 3.394E-06 2 11590 102.66 102.66 1 2.0083 1.6415 0 26474000 8734700 17740000 30411 1945 11545 11859 47396;47397 47396 SASAPAAEGEGTPTQPASEK 20 1 0 Acetyl (Protein N-term) _(ac)SASAPAAEGEGTPTQPASEK_ 1 0 0 P35659;B4DFG0 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 968.9556 2 964.447616 1926.88068 61695.55 0.36621 0.00035319 0.22109 0.00021323 0.5873 0.00056642 964.447760429878 968.455149365631 43.614 0.68249 43.614 43.332 44.015 -3.8147E-06 403 61 8 0 0 0 7.7148E-18 2 23224 122.97 116.06 1 0.63469 0.71848 0 100810000 65337000 35468000 30412 1546 11546 11860 47398;47399 47399 SASAPAAEGEGTPTQPASEK 20 1 0 Acetyl (Protein N-term) _(ac)SASAPAAEGEGTPTQPASEK_ 1 0 0 P35659;B4DFG0 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 964.9496 2 964.447616 1926.88068 61344.16 0.51104 0.00049288 0.02428 2.3417E-05 0.53533 0.00051629 964.447520123787 968.956231737741 43.057 0.6207 43.057 42.709 43.33 0 348 51 9 0 0 0 7.9329E-08 3 23101 87.083 80.385 1 0.66894 0.74788 0 105010000 66466000 38547000 30413 1546 11546 11860 47400;47401;47402 47402 SASAPAAEGEGTPTQPASEK 20 1 0 Acetyl (Protein N-term) _(ac)SASAPAAEGEGTPTQPASEK_ 1 0 0 P35659;B4DFG0 P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 964.9509 2 964.447616 1926.88068 61462.99 -0.15532 -0.0001498 0.46415 0.00044765 0.30882 0.00029784 964.949543177199 968.455158588422 51.55 0.88199 51.55 51.158 52.04 3.8147E-06 492 62 10 0 0 0 0.00012843 1 24640 45.33 45.33 1 0.86822 0.7218 0 38026000 20445000 17581000 30414 1546 11546 11860 47403 47403 SASLCAATLAAVLQR 15 0 1 Unmodified _SASLCAATLAAVLQR_ 0 0 0 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9 Q68E10 Q68E10 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 771.4212 2 766.416682 1530.81881 75499.38 0.91782 0.00070343 -0.60847 -0.00046634 0.30935 0.00023709 766.917283370415 771.420521920514 124.85 0.3139 124.85 124.7 125.01 0 37 15 5 0 0 0 0.023377 1 73955 29.936 29.936 1 2.3735 2.0742 0 1410600 443190 967420 30415 714 11547 11861 47404 47404 SASSNSAEAGGDTVTLDDILSLK 23 1 0 Unmodified _SASSNSAEAGGDTVTLDDILSLK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1126.0516 2 1126.05043 2250.08631 56384.13 0.21072 0.00023728 -0.34351 -0.00038681 -0.13279 -0.00014953 1126.04901379499 1130.05597131114 119.97 0.39301 119.97 119.71 120.1 0 103 26 6 0 0 0 0.0040377 1 77147 26.148 21.346 1 0.96842 0.95658 0 8422500 4463900 3958600 30416 2100 11548 11862 47405 47405 SASSNSAEAGGDTVTLDDILSLK 23 1 0 Unmodified _SASSNSAEAGGDTVTLDDILSLK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1126.052 2 1126.05043 2250.08631 NaN NaN NaN -0.45344 -0.00051059 NaN NaN NaN NaN 119.41 0.47145 119.41 119.19 119.67 -7.6294E-06 0 0 0 0.005518 1 78715 36.193 31.016 1 NaN NaN 0 7290500 7290500 0 30417 2100 11548 11862 47406 47406 SASSNSAEAGGDTVTLDDILSLK 23 1 0 Unmodified _SASSNSAEAGGDTVTLDDILSLK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1130.5603 2 1126.05043 2250.08631 56947.19 0.58582 0.00065966 0.5543 0.00062417 1.1401 0.0012838 1126.5530629465 1130.05810806861 132.63 0.46956 132.63 132.42 132.89 0 66 20 6 0 0 0 1.4683E-05 1 80678 45.618 45.618 1 1.8952 1.4979 0 5167400 1965800 3201600 30418 2100 11548 11862 47407 47407 SASSNSAEAGGDTVTLDDILSLK 23 1 0 Unmodified _SASSNSAEAGGDTVTLDDILSLK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1130.5612 2 1126.05043 2250.08631 56559.38 0.7212 0.0008121 0.3083 0.00034717 1.0295 0.0011593 1126.55138268438 1130.55906153848 132.43 0.42265 132.43 132.23 132.65 0 65 17 6 0 0 0 0.015465 1 79679 23.226 22.868 1 1.7175 1.4061 0 5447800 2045100 3402800 30419 2100 11548 11862 47408 47408 SATIVADLSETTIQTPDGEER 21 0 1 Unmodified _SATIVADLSETTIQTPDGEER_ 0 0 0 B4DDU7;Q53HS1;Q9NRG9;F8VZ44;H3BU82 B4DDU7 B4DDU7 AAAS Aladin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1117.0433 2 1117.04515 2232.07575 NaN NaN NaN -2.8685 -0.0032042 NaN NaN NaN NaN 100.23 0.093872 100.23 100.2 100.29 7.6294E-06 0 0 0 0.019332 1 61446 31.827 26.334 1 NaN NaN 0 2839200 2839200 0 30420 961 11549 11863 47409 47409 SATNLPQLK 9 1 0 Unmodified _SATNLPQLK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.2801 2 486.279649 970.544745 86322.03 0.2166 0.00010533 -0.17525 -8.5221E-05 0.04135 2.0108E-05 486.279648142802 490.286650175671 49.212 0.58784 49.212 48.894 49.482 0 169 43 5 0 0 0 0.017716 1 26869 52.716 25.462 1 0.57021 0.61163 0 32636000 22823000 9812300 30421 1589 11550 11864 47410 47410 SATNLPQLK 9 1 0 Unmodified _SATNLPQLK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2865 2 486.279649 970.544745 87762.5 0.19119 9.2971E-05 -0.2283 -0.00011102 -0.037116 -1.8049E-05 486.279431112866 490.286501519375 47.982 0.47106 47.982 47.718 48.189 0 127 32 6 0 0 0 0.015503 1 26708 54.712 24.209 1 0.53934 0.54345 0 27947000 18483000 9463700 30422 1589 11550 11864 47411 47411 SAVCIADPLPTPSQEK 16 1 0 Unmodified _SAVCIADPLPTPSQEK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.4288 2 856.929819 1711.84509 65935.05 0.62183 0.00053287 -0.53731 -0.00046044 0.084522 7.2429E-05 856.930031715998 860.937256821961 86.063 0.49904 86.063 85.846 86.345 0 183 41 7 0 0 0 0.00015482 4 51652 71.176 64.882 1 0.29876 0.30357 0 18079000 12902000 5176500 30423 1965 11551 11865 47412;47413;47414;47415 47412 SAVCIADPLPTPSQEK 16 1 0 Unmodified _SAVCIADPLPTPSQEK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 856.9316 2 856.929819 1711.84509 66349.09 0.72827 0.00062407 0.033854 2.901E-05 0.76212 0.00065308 856.929854546175 860.937104883104 85.251 0.56653 85.251 84.945 85.512 -7.6294E-06 185 47 5 0 0 0 0.00024471 3 52277 57.802 57.802 1 0.29117 0.3087 0 23474000 17379000 6095400 30424 1965 11551 11865 47416;47417;47418 47416 SAVCIADPLPTPSQEK 16 1 0 Unmodified _SAVCIADPLPTPSQEK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.9368 2 856.929819 1711.84509 65532.39 0.67652 0.00057973 -0.096135 -8.2381E-05 0.58038 0.00049735 857.431105308273 860.936793554085 98.769 0.63243 98.769 98.487 99.12 0 220 38 8 0 0 0 0.0087439 2 55650 34.264 34.264 1 0.59984 0.47999 0 7162600 4341700 2820900 30425 1965 11551 11865 47419;47420 47420 SAVEDEGLK 9 1 0 Unmodified _SAVEDEGLK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2449 2 474.237647 946.460741 87235.32 -0.12728 -6.0363E-05 0.75257 0.0003569 0.62528 0.00029653 474.238160711935 478.244906685284 24.775 0.82608 24.775 24.314 25.14 0 140 37 7 0 0 0 0.0018366 2 10452 90.709 67.969 1 0.84966 0.95774 0 75904000 40615000 35289000 30426 533 11552 11866 47421;47422 47421 SAVLTALIVGLGGR 14 0 1 Unmodified _SAVLTALIVGLGGR_ 0 0 0 Q96SB8;C9JMN1;A0A0A0MRY1 Q96SB8 Q96SB8 SMC6 Structural maintenance of chromosomes protein 6 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8546 2 663.908819 1325.80309 87299.39 0.982 0.00065196 0.017888 1.1876E-05 0.99988 0.00066383 664.410524166188 668.913090369887 125.63 0.43701 125.63 125.4 125.83 0 57 27 4 0 0 0 0.007223 1 81749 58.37 45.017 1 0.99713 1.0768 0 2554500 1195200 1359300 30427 1989 11553 11867 47423 47423 SAVLTALIVGLGGR 14 0 1 Unmodified _SAVLTALIVGLGGR_ 0 0 0 Q96SB8;C9JMN1;A0A0A0MRY1 Q96SB8 Q96SB8 SMC6 Structural maintenance of chromosomes protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.9092 2 663.908819 1325.80309 77716.05 0.953 0.00063271 -0.047219 -3.1349E-05 0.90578 0.00060136 663.908620563215 668.912939048833 125.12 0.39321 125.12 124.91 125.3 0 63 28 5 0 0 0 0.00036505 1 83249 61.353 50.896 1 0.92489 0.99672 0 3026400 1931600 1094800 30428 1989 11553 11867 47424 47424 SAYGGPVGAGIR 12 0 1 Unmodified _SAYGGPVGAGIR_ 0 0 0 CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.798 2 552.793455 1103.57236 80030.61 0.42178 0.00023316 -1.2364 -0.00068346 -0.81459 -0.0004503 552.793557370843 557.797479144899 46.038 0.83485 46.038 45.625 46.46 0 327 73 7 0 0 0 0.00016383 2 24767 92.051 66.916 1 1.3505 1.5665 0 173190000 77673000 95520000 + 30429 1171;1158 11554 11868 47425;47426 47425 SAYGGPVGAGIR 12 0 1 Unmodified _SAYGGPVGAGIR_ 0 0 0 CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.7941 2 552.793455 1103.57236 81735.43 0.51298 0.00028357 -0.62982 -0.00034816 -0.11684 -6.4586E-05 552.793676094848 557.797591784059 44.986 0.69113 44.986 44.677 45.368 0 210 56 5 0 0 0 1.2879E-08 2 24600 122.44 112.65 1 1.2623 1.4503 0 196030000 89951000 106080000 + 30430 1171;1158 11554 11868 47427;47428 47428 SAYGGPVGAGIR 12 0 1 Unmodified _SAYGGPVGAGIR_ 0 0 0 CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.7975 2 552.793455 1103.57236 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.041 1 53.041 52.541 53.541 0 0 0 0 0.035296 1 26298 44.318 27.541 1 + 30431 1171;1158 11554 11868 47429 47429 SAYGGPVGAGIR 12 0 1 Unmodified _SAYGGPVGAGIR_ 0 0 0 CON__P08729;CON__Q9DCV7;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.7979 2 552.793455 1103.57236 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.437 1 53.437 52.937 53.937 0 0 0 0 0.0083663 1 25947 59.052 43.39 1 + 30432 1171;1158 11554 11868 47430 47430 SAYLHPQQFDCEPGVLGSK 19 1 0 Unmodified _SAYLHPQQFDCEPGVLGSK_ 0 0 0 A0A024RCP3;Q12899 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.674 3 711.673839 2131.99969 72676.62 0.47604 0.00033879 -0.0050091 -3.5648E-06 0.47103 0.00033522 711.674009214688 714.345366187386 76.925 0.52869 76.925 76.697 77.226 0 146 43 5 0 0 0 7.0653E-07 1 46437 84.249 84.249 1 0.77731 0.83453 0 21422000 11358000 10064000 30433 365 11555 11869 47431 47431 SAYLHPQQFDCEPGVLGSK 19 1 0 Unmodified _SAYLHPQQFDCEPGVLGSK_ 0 0 0 A0A024RCP3;Q12899 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.0087 3 711.673839 2131.99969 72764.86 0.74745 0.00053194 -0.3806 -0.00027087 0.36685 0.00026108 712.008092023783 714.345121791218 89.481 0.5694 89.481 89.214 89.783 0 175 36 8 0 0 0 0.058801 1 49474 10.243 8.6328 1 0.73329 0.56868 0 3491200 2022300 1469000 30434 365 11555 11869 47432 47432 SAYNVYVAER 10 0 1 Unmodified _SAYNVYVAER_ 0 0 0 H7BYN3;Q6LES8;E5KSX8;E5KSU5;Q00059 H7BYN3 H7BYN3 TFAM Transcription factor A, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.2971 2 586.290745 1170.56694 78173.58 0.40942 0.00024004 -0.048893 -2.8666E-05 0.36053 0.00021138 586.290674449825 591.294869469153 49.649 0.59137 49.649 49.332 49.923 -3.8147E-06 169 39 7 0 0 0 3.5724E-08 2 27218 118.71 108.93 1 1.185 1.313 0 64251000 31469000 32783000 30435 1209 11556 11870 47433;47434 47433 SCDGNQELLNFLR 13 0 1 Unmodified _SCDGNQELLNFLR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.3784 2 783.372472 1564.73039 NaN NaN NaN 0.11554 9.0509E-05 NaN NaN NaN NaN 110.85 0.53881 110.85 110.6 111.14 0 0 0 0 7.1101E-15 1 69560 130.01 122.8 1 NaN NaN 0 17345000 0 17345000 30436 2103 11557 11871 47435 47435 SCDGNQELLNFLR 13 0 1 Unmodified _SCDGNQELLNFLR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.3773 2 783.372472 1564.73039 NaN NaN NaN 0.034364 2.692E-05 NaN NaN NaN NaN 110.25 0.58804 110.25 109.98 110.57 -7.6294E-06 0 0 0 1.6252E-48 1 70830 178.54 168.31 1 NaN NaN 0 22428000 0 22428000 30437 2103 11557 11871 47436 47436 SCDGNQELLNFLR 13 0 1 Unmodified _SCDGNQELLNFLR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 788.3778 2 783.372472 1564.73039 69228.05 0.83899 0.00065724 0.29237 0.00022903 1.1314 0.00088627 784.377074271091 788.377044362656 122.25 0.56445 122.25 121.95 122.52 -7.6294E-06 129 27 9 0 0 0 0.00013532 2 72737 80.763 78.735 1 22.078 18.877 0 39151000 1417800 37733000 30438 2103 11557 11871 47437;47438 47437 SCDGNQELLNFLR 13 0 1 Unmodified _SCDGNQELLNFLR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.3774 2 783.372472 1564.73039 NaN NaN NaN 0.03816 2.9894E-05 NaN NaN NaN NaN 122.09 0.70119 122.09 121.7 122.4 7.6294E-06 0 0 0 0.004177 1 71673 62.408 55.279 1 NaN NaN 0 44023000 0 44023000 30439 2103 11557 11871 47439 47439 SCDLLLFLR 9 0 1 Unmodified _SCDLLLFLR_ 0 0 0 Q6PJG6 Q6PJG6 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.8145 2 568.810259 1135.60597 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.22 1 120.22 119.72 120.72 0 0 0 0 0.029533 1 77461 53.166 48.627 1 30440 1856 11558 11872 47440 47440 SCDLLLFLR 9 0 1 Unmodified _SCDLLLFLR_ 0 0 0 Q6PJG6 Q6PJG6 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.8138 2 568.810259 1135.60597 NaN NaN NaN -0.29412 -0.0001673 NaN NaN NaN NaN 119.57 0.29666 119.57 119.4 119.7 0 0 0 0 0.0055468 1 78853 74.127 64.913 1 NaN NaN 0 1315100 0 1315100 30441 1856 11558 11872 47441 47441 SCDPGLEDPCGLNR 14 0 1 Unmodified _SCDPGLEDPCGLNR_ 0 0 0 A8K5Y7;Q9HAV4;B3KPQ5;Q9H8N6;B3KNC6;H0Y3Q8 A8K5Y7 A8K5Y7 XPO5 Exportin-5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.3438 2 795.337772 1588.66099 NaN NaN NaN -0.12167 -9.6765E-05 NaN NaN NaN NaN 54.305 0.27732 54.305 54.172 54.45 -3.8147E-06 0 0 0 0.0085228 1 31004 53.08 49.034 1 NaN NaN 0 5811700 0 5811700 30442 754 11559 11873 47442 47442 SCEGQNPELLPK 12 1 0 Unmodified _SCEGQNPELLPK_ 0 0 0 B4DSL6;A8K5D9;A0A024RA49;Q9NQW6 B4DSL6 B4DSL6 ANLN Actin-binding protein anillin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.3421 2 686.332284 1370.65001 NaN NaN NaN 0.7022 0.00048194 NaN NaN NaN NaN 47.887 0.22002 47.887 47.806 48.026 -3.8147E-06 0 0 0 0.0068733 1 26723 59.542 30.815 1 NaN NaN 0 3708200 0 3708200 30443 294 11560 11874 47443 47443 SCENLAPFNTALK 13 1 0 Unmodified _SCENLAPFNTALK_ 0 0 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.8623 2 732.861209 1463.70786 70574.95 0.9067 0.00066448 -0.06213 -4.5533E-05 0.84457 0.00061895 732.860639808858 736.868119705213 96.996 0.55423 96.996 96.734 97.288 -7.6294E-06 131 27 6 0 0 0 0.000141 2 54510 89.171 87.418 1 0.87813 0.69559 0 3021500 1638500 1382900 30444 32 11561 11875 47444;47445 47445 SCENLAPFNTALK 13 1 0 Unmodified _SCENLAPFNTALK_ 0 0 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 736.868 2 732.861209 1463.70786 70943.03 0.46614 0.00034162 0.43314 0.00031743 0.89928 0.00065905 732.860755612463 736.868158626054 96.849 0.64706 96.849 96.503 97.15 -7.6294E-06 132 31 7 0 0 0 0.0029363 2 53543 51.727 46.934 1 0.89573 0.72705 0 2848900 1353400 1495400 30445 32 11561 11875 47446;47447 47446 SCFEDPEWK 9 1 0 Unmodified _SCFEDPEWK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.2478 2 599.247689 1196.48082 79937.23 0.71577 0.00042893 -0.25814 -0.00015469 0.45763 0.00027423 599.247500368871 603.25460929063 57.617 0.34081 57.617 57.423 57.764 0 124 27 6 0 0 0 0.010844 2 33345 58.916 55.813 1 0.73348 0.7891 0 21579000 11696000 9883100 30446 1997 11562 11876 47448;47449 47449 SCFESSPDPELK 12 1 0 Unmodified _SCFESSPDPELK_ 0 0 0 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3152 2 698.308474 1394.6024 75957.9 0.37647 0.00026289 0.45552 0.0003181 0.83199 0.00058099 698.308750747185 702.817274214803 52.793 0.44257 52.793 52.557 52.999 0 89 32 4 0 0 0 0.036989 1 29474 34.773 34.773 1 1.0896 1.075 0 9261600 5024600 4237000 30447 619 11563 11877 47450 47450 SCGSLLPELK 10 1 0 Unmodified _SCGSLLPELK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.2993 2 552.291899 1102.56925 NaN NaN NaN 0.16349 9.0293E-05 NaN NaN NaN NaN 82.308 0.45927 82.308 82.022 82.481 0 0 0 0 3.738E-06 1 50313 105.36 90.42 1 NaN NaN 0 17112000 0 17112000 30448 1207 11564 11878 47451 47451 SCGSSTPDEFPTDIPGTK 18 1 0 Unmodified _SCGSSTPDEFPTDIPGTK_ 0 0 0 P41091;H7BZU1 P41091 P41091 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 948.9226 2 948.420013 1894.82547 63233.23 0.97497 0.00092468 -1.0126 -0.00096038 -0.037639 -3.5698E-05 948.920765948461 952.928030854009 80.729 0.50156 80.729 80.467 80.969 0 161 43 6 0 0 0 2.5324E-05 3 48014 69.352 67.543 1 2.0114 1.9785 0 19946000 7565400 12381000 30449 1559 11565 11879 47452;47453;47454 47453 SCGSSTPDEFPTDIPGTK 18 1 0 Unmodified _SCGSSTPDEFPTDIPGTK_ 0 0 0 P41091;H7BZU1 P41091 P41091 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 948.4194 2 948.420013 1894.82547 63540.48 0.70511 0.00066874 -0.43468 -0.00041226 0.27043 0.00025648 948.920950173493 952.426704955392 79.754 0.51266 79.754 79.533 80.045 0 146 40 5 0 0 0 6.1582E-05 2 48460 54.524 54.524 1 1.8917 2.0508 0 22170000 7955200 14215000 30450 1559 11565 11879 47455;47456 47456 SCMIVNVNPCASTYDETLHVAK 22 1 0 Oxidation (M) _SCM(ox)IVNVNPCASTYDETLHVAK_ SCM(1)IVNVNPCASTYDETLHVAK SCM(52.48)IVNVNPCASTYDETLHVAK 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.7172 3 842.387153 2524.13963 NaN NaN NaN -0.35797 -0.00030155 NaN NaN NaN NaN 82.695 0.17 82.695 82.611 82.781 0 0 0 0 0.00010962 1 50597 52.483 39.425 1 NaN NaN 0 5723200 5723200 0 30451 1421 11566 11880 47457 47457 1118 SCMIVNVNPCASTYDETLHVAK 22 1 0 Unmodified _SCMIVNVNPCASTYDETLHVAK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.3944 3 837.055515 2508.14472 65234.21 0.55079 0.00046104 -0.83884 -0.00070215 -0.28805 -0.00024111 837.390346684401 840.061039006599 105.98 0.49697 105.98 105.78 106.28 0 116 23 9 0 0 0 0.020753 1 60496 18.403 15.521 1 1.2722 1.0085 0 4738800 1795400 2943400 30452 1421 11566 11881 47458 47458 SCMIVNVNPCASTYDETLHVAK 22 1 0 Unmodified _SCMIVNVNPCASTYDETLHVAK_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 839.7283 3 837.055515 2508.14472 67223.97 0.67733 0.00056697 -0.77533 -0.00064899 -0.097993 -8.2026E-05 837.390282316543 840.061088557016 105.78 0.3815 105.78 105.6 105.98 0 149 23 10 0 0 0 4.7056E-06 2 59504 47.155 44.232 1 1.317 1.0752 0 5658100 2506400 3151700 30453 1421 11566 11881 47459;47460 47459 SCPVVQSSQHLFLDLPK 17 1 0 Unmodified _SCPVVQSSQHLFLDLPK_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.0118 3 652.340021 1953.99823 NaN NaN NaN -0.34355 -0.00022411 NaN NaN NaN NaN 99.947 0.73709 99.947 99.487 100.22 0 0 0 0 0.027736 1 61063 28.032 18.868 1 NaN NaN 0 17516000 0 17516000 30454 732 11567 11882 47461 47461 SCPVVQSSQHLFLDLPK 17 1 0 Unmodified _SCPVVQSSQHLFLDLPK_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.0121 3 652.340021 1953.99823 74407.31 0.91107 0.00059433 -0.16642 -0.00010856 0.74465 0.00048577 652.341259035344 655.345096002911 98.725 0.62909 98.725 98.403 99.032 0 242 51 7 0 0 0 3.3913E-05 2 61711 58.98 58.98 1 3.0754 3.1115 0 28959000 6140100 22819000 30455 732 11567 11882 47462;47463 47462 SCSGVEFSTSGHAYTDTGK 19 1 0 Unmodified _SCSGVEFSTSGHAYTDTGK_ 0 0 0 Q9Y277;E5RJN6;E5RHZ6;E5RHE1 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.9583 3 664.286421 1989.83743 73897.4 0.81642 0.00054233 0.071123 4.7246E-05 0.88754 0.00058958 664.620679069436 666.957839529484 41.068 0.45592 41.068 40.826 41.281 0 234 36 9 0 0 0 1.573E-06 1 21473 80.236 79.304 1 1.5659 1.6864 0 38090000 15333000 22757000 30456 2124 11568 11883 47464 47464 SCSGVEFSTSGHAYTDTGK 19 1 0 Unmodified _SCSGVEFSTSGHAYTDTGK_ 0 0 0 Q9Y277;E5RJN6;E5RHZ6;E5RHE1 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 999.9366 2 995.925994 1989.83743 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.96 1 40.96 40.46 41.46 0 0 0 0 0.0042368 1 21499 50.155 44.549 1 30457 2124 11568 11883 47465 47465 SCSGVEFSTSGHAYTDTGK 19 1 0 Unmodified _SCSGVEFSTSGHAYTDTGK_ 0 0 0 Q9Y277;E5RJN6;E5RHZ6;E5RHE1 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.9575 3 664.286421 1989.83743 74619.31 0.83245 0.00055299 -0.12813 -8.5117E-05 0.70432 0.00046787 664.954808861935 666.957807415934 40.082 0.45753 40.082 39.87 40.328 0 180 39 7 0 0 0 1.059E-12 1 21262 107.72 105.99 1 1.6284 1.797 0 44049000 13062000 30987000 30458 2124 11568 11883 47466 47466 SCSGVEFSTSGHAYTDTGK 19 1 0 Unmodified _SCSGVEFSTSGHAYTDTGK_ 0 0 0 Q9Y277;E5RJN6;E5RHZ6;E5RHE1 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 999.9357 2 995.925994 1989.83743 NaN NaN NaN -0.16787 -0.00016719 NaN NaN NaN NaN 40.085 0.26285 40.085 39.902 40.165 0 0 0 0 2.2729E-06 1 21277 74.853 69.247 1 NaN NaN 0 10529000 0 10529000 30459 2124 11568 11883 47467 47467 SCSGVEFSTSGSSNTDTGK 19 1 0 Unmodified _SCSGVEFSTSGSSNTDTGK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;Q5JSD2;Q5JSD1;A2A3S1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 958.9094 2 954.399809 1906.78506 62230.03 0.87299 0.00083319 -0.40385 -0.00038544 0.46914 0.00044775 954.399477551542 958.406656214556 35.975 0.8507 35.975 35.603 36.453 0 532 81 9 0 0 0 5.3985E-08 3 18420 89.451 89.066 1 2.3562 2.6686 0 90287000 30079000 60208000 30460 28 11569 11884 47468;47469;47470 47470 SCSGVEFSTSGSSNTDTGK 19 1 0 Unmodified _SCSGVEFSTSGSSNTDTGK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;Q5JSD2;Q5JSD1;A2A3S1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 958.4068 2 954.399809 1906.78506 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.413 1 36.413 35.913 36.913 0 0 0 0 1.8002E-06 1 18412 82.069 73.114 1 30461 28 11569 11884 47471 47471 SCSGVEFSTSGSSNTDTGK 19 1 0 Unmodified _SCSGVEFSTSGSSNTDTGK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;Q5JSD2;Q5JSD1;A2A3S1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 958.4069 2 954.399809 1906.78506 62137.8 1.1009 0.0010507 -0.30333 -0.0002895 0.79757 0.0007612 954.399679431579 958.406794439288 35.2 0.66003 35.2 34.952 35.612 0 437 61 9 0 0 0 3.1446E-159 2 17847 253.15 252.33 1 2.2277 2.549 0 160850000 50685000 110160000 30462 28 11569 11884 47472;47473 47473 SCTPSPDQISHR 12 0 1 Unmodified _SCTPSPDQISHR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.8194 2 692.817332 1383.62011 74078.96 0.39909 0.0002765 0.13594 9.4183E-05 0.53504 0.00037068 692.817264998537 697.821479652623 23.265 0.23015 23.265 23.084 23.314 0 24 9 4 0 0 0 0.0063345 1 9086 49.3 49.3 1 1.112 1.1224 0 5814200 2956100 2858200 30463 1873 11570 11885 47474 47474 SCTVSINFGPCFK 13 1 0 Unmodified _SCTVSINFGPCFK_ 0 0 0 A8K6T5;Q9UBL3;F5H8F7;B4DPT1;H0YBF6;B4DEM3;H0YAQ0 A8K6T5 A8K6T5 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 762.8571 2 758.849787 1515.68502 NaN NaN NaN -0.47303 -0.00035896 NaN NaN NaN NaN 110.72 0.52724 110.72 110.44 110.97 0 0 0 0 0.0051692 1 64011 58.699 45.743 1 NaN NaN 0 1896300 0 1896300 30464 763 11571 11886 47475 47475 SCTVSINFGPCFK 13 1 0 Unmodified _SCTVSINFGPCFK_ 0 0 0 A8K6T5;Q9UBL3;F5H8F7;B4DPT1;H0YBF6;B4DEM3;H0YAQ0 A8K6T5 A8K6T5 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.8562 2 758.849787 1515.68502 70967.16 0.78973 0.00059928 -0.78036 -0.00059217 0.0093705 7.1108E-06 758.849291213257 762.856729520907 110.57 0.43915 110.57 110.41 110.85 0 82 22 6 0 0 0 0.010416 1 62971 41.704 35.601 1 1.8567 1.4691 0 3183400 1195300 1988200 30465 763 11571 11886 47476 47476 SCVSVEWAEGGATK 14 1 0 Unmodified _SCVSVEWAEGGATK_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;Q5JR91;Q5JR89 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.8415 2 740.840473 1479.66639 NaN NaN NaN 0.12473 9.2408E-05 NaN NaN NaN NaN 63.364 0.49623 63.364 63.128 63.624 0 0 0 0 0.0022738 1 36357 83.182 67.611 1 NaN NaN 0 7184200 7184200 0 30466 626 11572 11887 47477 47477 SDADSGFLGLRPTSVDPALR 20 0 2 Unmodified _SDADSGFLGLRPTSVDPALR_ 0 0 1 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.0243 3 692.023637 2073.04908 73799.4 0.86382 0.00059779 0.96707 0.00066924 1.8309 0.001267 692.360774578951 698.695858552371 115.29 1.0675 115.29 115 116.07 -7.6294E-06 164 48 9 0 0 0 0.00035631 1 67550 35.973 35.973 1 1.0005 0.84749 0 8941500 4145300 4796200 30467 1068 11573 11888 47478 47478 SDADSGFLGLRPTSVDPALR 20 0 2 Unmodified _SDADSGFLGLRPTSVDPALR_ 0 0 1 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.3587 3 692.023637 2073.04908 72917.54 0.64114 0.00044368 0.70019 0.00048454 1.3413 0.00092823 692.359337220383 698.695852813025 115.11 0.45845 115.11 114.91 115.37 -7.6294E-06 125 22 9 0 0 0 3.4646E-06 1 66507 50.883 50.883 1 0.99805 0.90956 0 7582100 3750900 3831200 30468 1068 11573 11888 47479 47479 SDAEDGEGTVASWELR 16 0 1 Unmodified _SDAEDGEGTVASWELR_ 0 0 0 A0A024R137;A0A024R102;Q96GM5;B4DF50 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.3823 2 861.384288 1720.75402 NaN NaN NaN -0.24029 -0.00020698 NaN NaN NaN NaN 80.49 0.36324 80.49 80.279 80.642 -7.6294E-06 0 0 0 0.0011588 1 47819 64.65 58.209 1 NaN NaN 0 4742600 4742600 0 30469 65 11574 11889 47480 47480 SDAEDGEGTVASWELR 16 0 1 Unmodified _SDAEDGEGTVASWELR_ 0 0 0 A0A024R137;A0A024R102;Q96GM5;B4DF50 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 866.3886 2 861.384288 1720.75402 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.354 1 80.354 79.854 80.854 -7.6294E-06 0 0 0 0.030087 1 47769 41.644 35.041 1 30470 65 11574 11889 47481 47481 SDAEDGEGTVASWELR 16 0 1 Unmodified _SDAEDGEGTVASWELR_ 0 0 0 A0A024R137;A0A024R102;Q96GM5;B4DF50 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.3839 2 861.384288 1720.75402 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.454 1 79.454 78.954 79.954 0 0 0 0 0.0017232 1 48273 56.122 50.151 1 30471 65 11574 11889 47482 47482 SDAEEDGGTVSQEEEDR 17 0 1 Unmodified _SDAEEDGGTVSQEEEDR_ 0 0 0 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 932.3762 2 926.869396 1851.72424 64448.72 0.013111 1.2152E-05 0.41624 0.0003858 0.42935 0.00039795 927.370916308793 932.375245389393 21.933 0.23896 21.933 21.784 22.023 0 30 14 4 0 0 0 0.00012513 2 8088 57.434 53.671 1 1.0906 1.1659 0 3501500 1189200 2312300 30472 1526 11575 11890 47483;47484 47483 SDAEEDGGTVSQEEEDR 17 0 1 Unmodified _SDAEEDGGTVSQEEEDR_ 0 0 0 P27824 P27824 P27824 CANX Calnexin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.8742 2 926.869396 1851.72424 NaN NaN NaN -0.193 -0.00017888 NaN NaN NaN NaN 21.787 0.27651 21.787 21.696 21.972 0 0 0 0 4.7472E-09 1 7853 97.551 94.423 1 NaN NaN 0 3182900 0 3182900 30473 1526 11575 11890 47485 47485 SDAEEDGGTVSQEEEDRKPK 20 2 1 Unmodified _SDAEEDGGTVSQEEEDRKPK_ 0 0 2 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.9965 3 735.996253 2204.96693 71076.63 0.52221 0.00038434 0.067776 4.9883E-05 0.58998 0.00043423 736.330343838647 744.675298597144 17.452 0.51358 17.452 17.266 17.78 0 79 18 8 0 0 0 7.9179E-13 1 4611 104.89 99.184 1 1.8541 2.2131 0 19237000 6545500 12692000 30474 1526 11576 11891 47486 47486 SDAEEDGGTVSQEEEDRKPK 20 2 1 Unmodified _SDAEEDGGTVSQEEEDRKPK_ 0 0 2 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.3299 3 735.996253 2204.96693 70669.08 0.28838 0.00021224 -0.034879 -2.5671E-05 0.2535 0.00018657 735.996290430421 744.675374535109 17.353 0.48831 17.353 17.167 17.656 0 86 16 10 0 0 0 2.8299E-07 1 4307 84.829 81.389 1 1.654 2.1332 0 23421000 8922400 14499000 30475 1526 11576 11891 47487 47487 SDAEEDGGTVSQEEEDRKPK 20 2 1 Unmodified _SDAEEDGGTVSQEEEDRKPK_ 0 0 2 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.996 3 735.996253 2204.96693 71159.58 0.22269 0.0001639 -0.1817 -0.00013373 0.040988 3.0167E-05 735.995839869499 744.675734911857 19.108 0.27788 19.108 19.001 19.279 -1.9073E-06 66 18 5 0 0 0 0.019844 1 4916 23.172 19.835 1 0.83982 0.87002 0 2478900 1450800 1028100 30476 1526 11576 11891 47488 47488 SDAEEDGGTVSQEEEDRKPK 20 2 1 Unmodified _SDAEEDGGTVSQEEEDRKPK_ 0 0 2 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.996 3 735.996253 2204.96693 70335.55 0.17706 0.00013031 -0.22426 -0.00016505 -0.047203 -3.4741E-05 735.995310232593 744.675424821251 19.211 0.3639 19.211 19.021 19.385 0 81 18 8 0 0 0 7.5491E-05 1 4549 45.257 40.547 1 0.85926 0.83652 0 2591500 1286100 1305400 30477 1526 11576 11891 47489 47489 SDAGLESDTAMK 12 1 0 Unmodified _SDAGLESDTAMK_ 0 0 0 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.775 2 612.774267 1223.53398 78917.17 0.38343 0.00023496 -0.3939 -0.00024137 -0.01047 -6.4155E-06 612.774222381267 616.780963690256 38.17 0.67052 38.17 37.733 38.403 0 158 55 5 0 0 0 0.017556 1 17251 41.399 41.399 1 1.7417 1.4647 0 2147500 792280 1355200 30478 2065 11577 11892 47490 47490 SDAPDSTGDQPGLHQDNSSNGK 22 1 0 Unmodified _SDAPDSTGDQPGLHQDNSSNGK_ 0 0 0 A0A024R784;O15164;B4DYZ9 A0A024R784 A0A024R784 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.659 3 742.98798 2225.94211 80072.74 0.51234 0.00038067 0.11742 8.7241E-05 0.62976 0.00046791 743.32284945012 745.658885783381 19.893 0.19131 19.893 19.785 19.977 0 19 7 4 0 0 0 0.00068323 2 6260 31.917 31.917 1 0.60786 0.63731 0 4429800 2260100 2169600 30479 217 11578 11893 47491;47492 47491 SDAYYCTGDVTAWTK 15 1 0 Unmodified _SDAYYCTGDVTAWTK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.3746 2 869.374877 1736.7352 65867.43 0.85503 0.00074334 0.014296 1.2428E-05 0.86932 0.00075577 869.374676113688 873.381933942205 82.401 0.84737 82.401 81.955 82.802 -7.6294E-06 425 71 9 0 0 0 1.1682E-07 2 49010 110.31 110.31 1 0.58063 0.63865 0 54622000 38329000 16292000 30480 139 11579 11894 47493;47494 47493 SDAYYCTGDVTAWTK 15 1 0 Unmodified _SDAYYCTGDVTAWTK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.3823 2 869.374877 1736.7352 65022.73 0.8173 0.00071054 -0.23146 -0.00020123 0.58584 0.00050931 869.374583453372 873.381664397575 81.413 0.71226 81.413 81.101 81.813 0 362 60 9 0 0 0 3.4445E-07 2 49632 105.65 105.08 1 0.58205 0.65622 0 61470000 39948000 21522000 30481 139 11579 11894 47495;47496 47496 SDCGVDCCCDPTK 13 1 0 Unmodified _SDCGVDCCCDPTK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.2736 2 787.272925 1572.5313 69219.57 0.39244 0.00030896 -0.56634 -0.00044586 -0.1739 -0.00013691 787.272934747143 791.280019008461 20.849 0.40681 20.849 20.708 21.114 -1.9073E-06 89 18 8 0 0 0 3.9382E-09 2 7206 121.29 113.06 1 0.78995 0.83422 0 16315000 7609600 8705400 30482 1803 11580 11895 47497;47498 47497 SDCGVDCCCDPTK 13 1 0 Unmodified _SDCGVDCCCDPTK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.2734 2 787.272925 1572.5313 69025.8 0.80148 0.00063098 -0.23285 -0.00018332 0.56862 0.00044766 787.273111806215 791.280028850983 20.704 0.28865 20.704 20.599 20.888 0 22 8 5 0 0 0 0.00013961 1 6998 73.435 72.024 1 0.76935 0.77157 0 6872400 4398500 2473900 30483 1803 11580 11895 47499 47499 SDCGVDCCCDPTK 13 1 0 Unmodified _SDCGVDCCCDPTK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.2812 2 787.272925 1572.5313 67352.8 0.40055 0.00031534 -0.68803 -0.00054167 -0.28748 -0.00022633 787.273197829219 791.280146549373 23.122 0.48187 23.122 22.921 23.403 0 140 21 11 0 0 0 0.0003313 2 7664 64.121 57.881 1 1.5664 1.2206 0 12253000 4555500 7697400 30484 1803 11580 11895 47500;47501 47501 SDDDGFEIVPIEDPAK 16 1 0 Unmodified _SDDDGFEIVPIEDPAK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.9146 2 873.907064 1745.79958 65289.32 0.87263 0.00076259 0.081453 7.1183E-05 0.95408 0.00083378 873.906984291762 877.914282513235 108.89 0.72181 108.89 108.53 109.26 0 285 46 8 0 0 0 7.616E-25 2 68046 145.31 145.31 1 0.92407 1.042 0 76712000 41600000 35112000 30485 1898 11581 11896 47502;47503 47503 SDDDGFEIVPIEDPAK 16 1 0 Unmodified _SDDDGFEIVPIEDPAK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.9142 2 873.907064 1745.79958 65785.57 0.58442 0.00051073 0.092547 8.0877E-05 0.67697 0.00059161 874.408572390693 877.914321416068 108.4 0.76396 108.4 108.08 108.84 0 328 52 9 0 0 0 6.03E-12 2 69211 113.24 113.24 1 0.9281 1.0416 0 76595000 40924000 35671000 30486 1898 11581 11896 47504;47505 47505 SDDDGFEIVPIEDPAK 16 1 0 Unmodified _SDDDGFEIVPIEDPAK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 877.9157 2 873.907064 1745.79958 65578.96 0.5156 0.00045058 -0.047687 -4.1674E-05 0.46791 0.00040891 873.907272426216 877.914341395227 120.05 1.3392 120.05 119.73 121.07 -7.6294E-06 363 63 9 0 0 0 5.0545E-05 3 71094 83.573 83.573 1 1.2475 0.99169 0 19280000 8428400 10852000 30487 1898 11581 11896 47506;47507;47508 47507 SDDDGFEIVPIEDPAK 16 1 0 Unmodified _SDDDGFEIVPIEDPAK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 877.9146 2 873.907064 1745.79958 64955.93 0.49541 0.00043294 0.11305 9.8799E-05 0.60846 0.00053174 873.907352248988 877.914250756799 120.16 1.7987 120.16 119.62 121.42 0 435 88 8 0 0 0 6.985E-09 4 70239 108.72 105.07 1 1.2049 0.97474 0 13411000 6442700 6967800 30488 1898 11581 11896 47509;47510;47511;47512 47510 SDDILEEGEK 10 1 0 Unmodified _SDDILEEGEK_ 0 0 0 B4DXX1;B2R713;Q7Z2T5 B4DXX1 B4DXX1 TRMT1L TRMT1-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.7617 2 567.761683 1133.50881 79363.71 0.76977 0.00043705 -0.20427 -0.00011597 0.56551 0.00032107 567.761862189383 571.768359097183 40.705 0.30308 40.705 40.524 40.828 0 65 21 4 0 0 0 2.8198E-05 1 21754 99.688 72.558 1 1.6733 1.7589 0 19680000 8735500 10945000 30489 846 11582 11897 47513 47513 SDEEEQQYVIK 11 1 0 Unmodified _SDEEEQQYVIK_ 0 0 0 Q4KMR5;E9PH99;Q9Y4E5 Q4KMR5 Q4KMR5 ZNF451 Zinc finger protein 451 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.8276 2 684.319896 1366.62524 75110.73 0.86957 0.00059507 0.40131 0.00027463 1.2709 0.00086969 684.321105790848 688.3270318248 41.605 0.34802 41.605 41.501 41.849 0 49 29 5 0 0 0 0.050997 1 21929 55.064 44.54 1 0.666 0.67154 0 10036000 4276300 5759700 30490 1236 11583 11898 47514 47514 SDFEFTLK 8 1 0 Unmodified _SDFEFTLK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.7522 2 493.745108 985.475663 86054.46 0.23503 0.00011604 0.31548 0.00015577 0.55051 0.00027181 493.745169360778 497.752290034093 85.995 0.52016 85.995 85.677 86.198 0 222 43 7 0 0 0 0.013893 1 51700 64.265 22.612 1 0.86377 0.94034 0 49091000 25014000 24077000 30491 1803 11584 11899 47515 47515 SDFEFTLK 8 1 0 Unmodified _SDFEFTLK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.7451 2 493.745108 985.475663 86684.01 0.63003 0.00031107 0.024658 1.2175E-05 0.65469 0.00032325 493.744996102159 497.752161847383 84.952 0.47828 84.952 84.724 85.202 -7.6294E-06 200 41 7 0 0 0 0.0014375 2 52166 109.01 36.874 1 0.83911 0.94587 0 60958000 33783000 27175000 30492 1803 11584 11899 47516;47517 47516 SDGDPIVDPEK 11 1 0 Unmodified _SDGDPIVDPEK_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q59G16 Q59G16 SMARCC2 SWI/SNF complex subunit SMARCC2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.2845 2 586.2775 1170.54045 NaN NaN NaN 1.8509 0.0010852 NaN NaN NaN NaN 41.3 0.66634 41.3 41.028 41.695 0 0 0 0 0.00072394 1 21623 88.495 73.829 1 NaN NaN 0 9332800 0 9332800 30493 321 11585 11900 47518 47518 SDGDPIVDPEK 11 1 0 Unmodified _SDGDPIVDPEK_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q59G16 Q59G16 SMARCC2 SWI/SNF complex subunit SMARCC2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.2792 2 586.2775 1170.54045 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.118 1 41.118 40.618 41.618 0 0 0 0 0.00079231 1 21608 70.908 49.608 1 30494 321 11585 11900 47519 47519 SDGEMVLPGFPDADSFVK 18 1 0 Oxidation (M) _SDGEM(ox)VLPGFPDADSFVK_ SDGEM(1)VLPGFPDADSFVK SDGEM(53.97)VLPGFPDADSFVK 0 1 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 967.951 2 963.943124 1925.87169 NaN NaN NaN 0.27853 0.00026849 NaN NaN NaN NaN 115.26 0.43288 115.26 115.08 115.52 -7.6294E-06 0 0 0 0.0004031 1 73491 53.967 38.765 1 NaN NaN 0 7494200 0 7494200 30495 1676 11586 11901 47520 47520 1474 SDGEMVLPGFPDADSFVK 18 1 0 Oxidation (M) _SDGEM(ox)VLPGFPDADSFVK_ SDGEM(1)VLPGFPDADSFVK SDGEM(45.89)VLPGFPDADSFVK 0 1 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 968.4543 2 963.943124 1925.87169 62193.63 0.52891 0.00050984 -0.49737 -0.00047944 0.031538 3.0401E-05 964.443709917459 967.949125383061 114.8 0.43132 114.8 114.61 115.04 0 80 26 5 0 0 0 0.00018189 2 74838 45.891 45.891 1 2.0487 2.1468 0 10762000 4055200 6706500 30496 1676 11586 11901 47521;47522 47522 1474 SDGGYTYDTSDLAAIK 16 1 0 Unmodified _SDGGYTYDTSDLAAIK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 842.8945 2 838.886132 1675.75771 65180.26 0.73166 0.00061378 -0.053289 -4.4703E-05 0.67837 0.00056907 838.88561327053 842.893347076377 94.297 0.70441 94.297 93.985 94.69 0 216 44 7 0 0 0 0.0087908 1 51853 34.241 33.271 1 0.8339 0.6832 0 4979600 2705900 2273700 30497 1609 11587 11902 47523 47523 SDGIYIINLK 10 1 0 Unmodified _SDGIYIINLK_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.329 2 568.321514 1134.62847 81598.73 0.78736 0.00044747 -0.15387 -8.7448E-05 0.63349 0.00036002 568.322127320811 572.328306071893 99.986 1.5946 99.986 99.476 101.07 0 692 129 10 0 0 0 0.0010823 1 61085 76.478 63.889 1 1.9161 2.2012 0 201060000 68527000 132540000 30498 119 11588 11903 47524 47524 SDGIYIINLK 10 1 0 Unmodified _SDGIYIINLK_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.3286 2 568.321514 1134.62847 80018.52 0.73109 0.00041549 -0.18251 -0.00010372 0.54858 0.00031177 568.322047469872 572.328401081406 99.197 1.1486 99.197 98.648 99.796 0 592 94 9 0 0 0 0.0019115 1 61972 71.491 62.074 1 1.8485 2.1526 0 245560000 80527000 165030000 30499 119 11588 11903 47525 47525 SDGIYIINLK 10 1 0 Unmodified _SDGIYIINLK_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.3281 2 568.321514 1134.62847 79622.37 0.85532 0.0004861 -0.5775 -0.00032821 0.27782 0.00015789 568.823087331199 572.328047312615 112.6 0.74829 112.6 112.32 113.07 0 151 36 8 0 0 0 0.00041837 1 65392 87.181 77.765 1 2.6001 2.0444 0 11152000 3222000 7930000 30500 119 11588 11903 47526 47526 SDGPYALVLVPTR 13 0 1 Unmodified _SDGPYALVLVPTR_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 699.3868 2 694.382634 1386.75072 73001.51 0.54374 0.00037756 0.036373 2.5257E-05 0.58011 0.00040282 694.382304317441 699.387072290536 117.25 0.4512 117.25 116.99 117.44 0 86 20 6 0 0 0 0.0022939 2 68012 54.343 54.343 1 1.1231 0.95235 0 3072200 1471700 1600500 30501 1053;1268 11589 11904 47527;47528 47527 SDHPGISITDLSK 13 1 0 Unmodified _SDHPGISITDLSK_ 0 0 0 A0A024R4Z6;Q08945;A0A0U1RRK2 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.3518 2 685.351531 1368.68851 72969.54 0.5426 0.00037187 0.031165 2.1359E-05 0.57377 0.00039323 685.351765156407 689.358667098829 62.323 1.773 62.323 61.517 63.29 -3.8147E-06 848 162 9 0 0 0 6.6973E-07 1 36482 111.86 94.625 1 0.7162 0.83107 0 221950000 127900000 94051000 30502 167 11590 11905 47529 47529 SDHPGISITDLSK 13 1 0 Unmodified _SDHPGISITDLSK_ 0 0 0 A0A024R4Z6;Q08945;A0A0U1RRK2 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.2422 3 457.236779 1368.68851 92887.79 0.26716 0.00012215 -0.25899 -0.00011842 0.0081606 3.7313E-06 457.236846711555 459.90803244925 73.137 0.94859 73.137 72.725 73.674 0 384 66 8 0 0 0 0.054368 1 38699 10.656 4.9358 1 1.0046 0.8033 0 8874000 4237300 4636700 30503 167 11590 11905 47530 47530 SDIASHFSNK 10 1 0 Unmodified _SDIASHFSNK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.2679 2 553.26727 1104.51999 79826.96 0.49746 0.00027523 0.66667 0.00036885 1.1641 0.00064408 553.267678047049 557.273763082289 24.116 0.52521 24.116 23.868 24.393 1.9073E-06 80 24 5 0 0 0 3.4088E-30 3 9890 177.58 145.22 1 0.63098 0.70246 0 61077000 39568000 21508000 30504 878 11591 11906 47531;47532;47533 47532 SDIASHFSNK 10 1 0 Unmodified _SDIASHFSNK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.2742 2 553.26727 1104.51999 79248.66 0.45352 0.00025092 2.1021 0.001163 2.5557 0.001414 553.267204176378 557.273975783528 23.726 0.72498 23.726 23.402 24.127 0 85 29 7 0 0 0 4.5809E-16 2 9551 152.37 127.55 1 0.64771 0.72881 0 71156000 45435000 25721000 30505 878 11591 11906 47534;47535 47534 SDIASHFSNK 10 1 0 Unmodified _SDIASHFSNK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.2675 2 553.26727 1104.51999 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.371 1 26.371 25.871 26.871 1.9073E-06 0 0 0 6.6709E-05 1 9945 83.456 57.719 1 30506 878 11591 11906 47536 47536 SDIASHFSNK 10 1 0 Unmodified _SDIASHFSNK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.2673 2 553.26727 1104.51999 80886.91 0.39866 0.00022057 1.1114 0.00061488 1.51 0.00083545 553.267276561476 557.274177815841 26.356 0.62835 26.356 26.125 26.753 -1.9073E-06 141 28 9 0 0 0 0.00098183 2 9384 78.098 70.53 1 1.7726 1.4518 0 8609800 3289800 5320000 30507 878 11591 11906 47537;47538 47538 SDIDEIVLVGGSTR 14 0 1 Unmodified _SDIDEIVLVGGSTR_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.8901 2 730.883195 1459.75184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.587 1 97.587 97.087 98.087 0 0 0 0 0.00097599 1 59542 77.593 62.022 1 30508 1466 11592 11907 47539 47539 SDIGEVILVGGMTR 14 0 1 Oxidation (M) _SDIGEVILVGGM(ox)TR_ SDIGEVILVGGM(1)TR SDIGEVILVGGM(54.68)TR 0 1 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52;H0YBG6 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.884 2 731.882141 1461.74973 72808.73 0.84827 0.00062083 0.41585 0.00030435 1.2641 0.00092519 731.882208359713 736.88663134169 94.198 0.82974 94.198 93.674 94.504 0 287 76 7 0 0 0 0.00062928 1 57003 54.683 49.142 1 2.9166 3.2342 0 66474000 18568000 47906000 30509 1092 11593 11908 47540 47540 837 SDIGEVILVGGMTR 14 0 1 Oxidation (M) _SDIGEVILVGGM(ox)TR_ SDIGEVILVGGM(1)TR SDIGEVILVGGM(111.52)TR 0 1 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52;H0YBG6 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.888 2 731.882141 1461.74973 72043.28 0.78088 0.00057151 0.6963 0.00050961 1.4772 0.0010811 731.882482784305 736.886752601242 93.317 0.92793 93.317 92.897 93.825 0 348 83 6 0 0 0 1.9196E-07 1 57949 111.52 99.362 1 2.8177 3.2287 0 51235000 14140000 37095000 30510 1092 11593 11908 47541 47541 837 SDIGEVILVGGMTR 14 0 1 Oxidation (M) _SDIGEVILVGGM(ox)TR_ SDIGEVILVGGM(1)TR SDIGEVILVGGM(62.41)TR 0 1 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52;H0YBG6 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.8824 2 731.882141 1461.74973 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.064 1 93.064 92.564 93.564 0 0 0 0 0.0011516 1 57736 62.408 46.154 1 30511 1092 11593 11908 47542 47542 837 SDIGEVILVGGMTR 14 0 1 Oxidation (M) _SDIGEVILVGGM(ox)TR_ SDIGEVILVGGM(1)TR SDIGEVILVGGM(45.43)TR 0 1 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52;H0YBG6 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.8826 2 731.882141 1461.74973 73092.51 0.66926 0.00048982 0.19026 0.00013925 0.85952 0.00062907 731.882119743398 736.887212140931 107.14 0.63908 107.14 106.78 107.42 7.6294E-06 130 40 6 0 0 0 0.002157 1 60374 45.433 45.433 1 0.77757 0.66642 0 3324600 1846000 1478700 30512 1092 11593 11908 47543 47543 837 SDKPIFTLNAHNDEISGLDLSSQIK 25 2 0 Unmodified _SDKPIFTLNAHNDEISGLDLSSQIK_ 0 0 1 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.6054 4 686.354074 2741.38719 72415.33 0.78392 0.00053805 -0.30278 -0.00020782 0.48114 0.00033023 686.604744278938 690.611933071609 114.79 0.48297 114.79 114.59 115.08 -7.6294E-06 111 22 9 0 0 0 3.3248E-06 2 67158 42.454 39.805 1 1.2507 1.0704 0 9774400 4270800 5503600 30513 339 11594 11909 47544;47545 47545 SDKPIFTLNAHNDEISGLDLSSQIK 25 2 0 Unmodified _SDKPIFTLNAHNDEISGLDLSSQIK_ 0 0 1 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.8561 4 686.354074 2741.38719 72482.69 0.66043 0.00045329 -0.34846 -0.00023917 0.31198 0.00021413 686.855588490992 690.360700552936 114.66 0.40731 114.66 114.48 114.89 -7.6294E-06 68 17 7 0 0 0 0.00090557 1 66159 24.831 22.183 1 1.3261 1.1207 0 11314000 4860700 6453500 30514 339 11594 11909 47546 47546 SDKTEEIAEEEETVFPK 17 2 0 Unmodified _SDKTEEIAEEEETVFPK_ 0 0 1 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3241 3 660.980992 1979.92115 74089.11 0.64235 0.00042458 -0.083761 -5.5365E-05 0.55859 0.00036922 660.980795857319 666.323935118163 78.18 0.80322 78.18 77.738 78.541 0 278 66 7 0 0 0 3.1728E-05 2 46220 71.263 60.924 1 1.1755 1.3984 0 23284000 9104900 14179000 30515 2065 11595 11910 47547;47548 47547 SDKTEEIAEEEETVFPK 17 2 0 Unmodified _SDKTEEIAEEEETVFPK_ 0 0 1 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.3229 3 660.980992 1979.92115 73786.67 0.74343 0.00049139 -0.15678 -0.00010363 0.58665 0.00038777 660.980835125873 666.323695260955 89.253 1.1625 89.253 88.812 89.975 0 496 75 10 0 0 0 3.0699E-05 2 49146 73.168 73.168 1 1.4977 1.2719 0 43191000 17914000 25277000 30516 2065 11595 11910 47549;47550 47549 SDKTEEIAEEEETVFPK 17 2 0 Unmodified _SDKTEEIAEEEETVFPK_ 0 0 1 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 998.9824 2 990.96785 1979.92115 61035.02 0.39403 0.00039047 0.01274 1.2625E-05 0.40677 0.00040309 991.469025721042 998.982135476305 89.255 0.69139 89.255 88.895 89.586 -7.6294E-06 259 45 9 0 0 0 0.0064231 1 49210 53.869 48.978 1 1.4628 1.2515 0 10431000 3456000 6975000 30517 2065 11595 11910 47551 47551 SDKTEEIAEEEETVFPK 17 2 0 Unmodified _SDKTEEIAEEEETVFPK_ 0 0 1 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.6584 3 660.980992 1979.92115 73830.72 0.34441 0.00022765 -0.073438 -4.8541E-05 0.27097 0.00017911 660.980967228079 666.323637362286 89.181 1.0784 89.181 88.748 89.827 0 478 69 10 0 0 0 2.3035E-09 2 48374 103.88 99.913 1 1.494 1.2712 0 36262000 14456000 21806000 30518 2065 11595 11910 47552;47553 47553 SDLEMQYETLQEELMALK 18 1 0 2 Oxidation (M) _SDLEM(ox)QYETLQEELM(ox)ALK_ SDLEM(1)QYETLQEELM(1)ALK SDLEM(124.07)QYETLQEELM(124.07)ALK 0 2 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1102.0104 2 1102.01088 2202.0072 NaN NaN NaN -0.2082 -0.00022944 NaN NaN NaN NaN 125.92 1.0642 125.92 125.57 126.63 0 0 0 0 4.8119E-24 2 82271 124.07 119.18 1 NaN NaN 0 54933000 54933000 0 + 30519 1165 11596 11911 47554;47555 47555 881;882 SDLEMQYETLQEELMALK 18 1 0 2 Oxidation (M) _SDLEM(ox)QYETLQEELM(ox)ALK_ SDLEM(1)QYETLQEELM(1)ALK SDLEM(71.55)QYETLQEELM(71.55)ALK 0 2 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1102.5111 2 1102.01088 2202.0072 NaN NaN NaN -0.15552 -0.00017138 NaN NaN NaN NaN 125.58 0.40477 125.58 125.26 125.66 0 0 0 0 1.2566E-06 1 83482 71.548 66.55 1 NaN NaN 0 55284000 55284000 0 + 30520 1165 11596 11911 47556 47556 881;882 SDLEMQYETLQEELMALK 18 1 0 2 Oxidation (M) _SDLEM(ox)QYETLQEELM(ox)ALK_ SDLEM(1)QYETLQEELM(1)ALK SDLEM(127.02)QYETLQEELM(127.02)ALK 0 2 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1102.5137 2 1102.01088 2202.0072 NaN NaN NaN 0.021215 2.3379E-05 NaN NaN NaN NaN 125.73 0.88926 125.73 125.35 126.24 0 0 0 0 2.7461E-24 1 84070 127.02 119.47 1 NaN NaN 0 70508000 70508000 0 + 30521 1165 11596 11911 47557 47557 881;882 SDLEMQYETLQEELMALK 18 1 0 2 Oxidation (M) _SDLEM(ox)QYETLQEELM(ox)ALK_ SDLEM(1)QYETLQEELM(1)ALK SDLEM(49.48)QYETLQEELM(49.48)ALK 0 2 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1102.5128 2 1102.01088 2202.0072 NaN NaN NaN -0.37761 -0.00041613 NaN NaN NaN NaN 134.68 0.16075 134.68 134.59 134.75 0 0 0 0 0.00064735 1 82396 49.482 44.68 1 NaN NaN 0 25698000 25698000 0 + 30522 1165 11596 11911 47558 47558 881;882 SDLEMQYETLQEELMALK 18 1 0 2 Oxidation (M) _SDLEM(ox)QYETLQEELM(ox)ALK_ SDLEM(1)QYETLQEELM(1)ALK SDLEM(106.32)QYETLQEELM(106.32)ALK 0 2 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1102.5114 2 1102.01088 2202.0072 NaN NaN NaN -0.14708 -0.00016209 NaN NaN NaN NaN 134.64 0.15112 134.64 134.56 134.71 0 0 0 0 1.3475E-17 1 81448 106.32 98.779 1 NaN NaN 0 28088000 28088000 0 + 30523 1165 11596 11911 47559 47559 881;882 SDLEMQYETLQEELMALKK 19 2 0 2 Oxidation (M) _SDLEM(ox)QYETLQEELM(ox)ALKK_ SDLEM(1)QYETLQEELM(1)ALKK SDLEM(74.73)QYETLQEELM(74.73)ALKK 0 2 1 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.0429 3 777.707998 2330.10216 NaN NaN NaN -0.43885 -0.0003413 NaN NaN NaN NaN 115.46 0.73797 115.46 115.18 115.92 -7.6294E-06 0 0 0 2.6867E-07 1 73393 74.732 65.568 1 NaN NaN 0 12066000 12066000 0 + 30524 1165 11597 11912 47560 47560 881;882 SDLEMQYETLQEELMALKK 19 2 0 2 Oxidation (M) _SDLEM(ox)QYETLQEELM(ox)ALKK_ SDLEM(1)QYETLQEELM(1)ALKK SDLEM(64.2)QYETLQEELM(64.2)ALKK 0 2 1 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.7075 3 777.707998 2330.10216 NaN NaN NaN 0.042349 3.2935E-05 NaN NaN NaN NaN 115.01 0.6725 115.01 114.66 115.33 0 0 0 0 1.3574E-05 1 74768 64.2 58.746 1 NaN NaN 0 18634000 18634000 0 + 30525 1165 11597 11912 47561 47561 881;882 SDLEMQYETLQEELMALKK 19 2 0 2 Oxidation (M) _SDLEM(ox)QYETLQEELM(ox)ALKK_ SDLEM(1)QYETLQEELM(1)ALKK SDLEM(90.44)QYETLQEELM(90.44)ALKK 0 2 1 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 778.0429 3 777.707998 2330.10216 NaN NaN NaN -0.43784 -0.00034051 NaN NaN NaN NaN 127.11 0.32281 127.11 126.89 127.21 -7.6294E-06 0 0 0 6.836E-11 1 75652 90.442 85.232 1 NaN NaN 0 5957300 5957300 0 + 30526 1165 11597 11912 47562 47562 881;882 SDLEMQYETLQEELMALKK 19 2 0 Unmodified _SDLEMQYETLQEELMALKK_ 0 0 1 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 767.3823 3 767.044722 2298.11234 NaN NaN NaN 1.8235 0.0013987 NaN NaN NaN NaN 131.61 0.23805 131.61 131.53 131.77 0 0 0 0 0.0003289 1 79037 43.383 29.755 1 NaN NaN 0 2839600 2839600 0 + 30527 1165 11597 11913 47563 47563 SDLGVHLR 8 0 1 Unmodified _SDLGVHLR_ 0 0 0 P49711 P49711 P49711 CTCF Transcriptional repressor CTCF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.7507 2 448.751059 895.487565 90481.21 0.12698 5.6981E-05 -0.09477 -4.2528E-05 0.032206 1.4453E-05 448.751044444757 453.755087658694 36.017 0.64254 36.017 35.748 36.391 -3.8147E-06 168 53 7 0 0 0 0.016916 1 18393 60.788 34.679 1 0.38262 0.41787 0 38343000 24603000 13739000 30528 1585 11598 11914 47564 47564 SDLIEVATR 9 0 1 Unmodified _SDLIEVATR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.2789 2 502.274564 1002.53457 88264.05 0.25386 0.00012751 0.007003 3.5174E-06 0.26086 0.00013102 502.274360147152 507.278657735464 62.533 0.99881 62.533 62.184 63.183 -3.8147E-06 283 91 6 0 0 0 0.011379 1 36571 58.433 43.764 1 30.117 34.525 0 82594000 2893900 79700000 30529 2103 11599 11915 47565 47565 SDLIEVATR 9 0 1 Unmodified _SDLIEVATR_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.2787 2 502.274564 1002.53457 84922.56 0.31821 0.00015983 -0.11395 -5.7233E-05 0.20426 0.00010259 502.274436739812 507.278588531425 73.4 1.495 73.4 72.898 74.393 7.6294E-06 306 108 6 0 0 0 0.010363 1 37891 59.35 48.128 1 25.284 21.039 0 15611000 677270 14933000 30530 2103 11599 11915 47566 47566 SDLSVIQR 8 0 1 Unmodified _SDLSVIQR_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.2564 2 459.256174 916.497795 89500.96 -0.0020349 -9.3455E-07 -0.89994 -0.0004133 -0.90197 -0.00041424 459.256102406334 464.259236655251 45.564 0.60773 45.564 45.429 46.037 0 136 53 5 0 0 0 0.00060278 1 24533 130.04 76.876 1 0.67671 0.74788 0 57268000 31849000 25419000 30531 2008 11600 11916 47567 47567 SDLTVDAVK 9 1 0 Unmodified _SDLTVDAVK_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8;H7C1M8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.2558 2 474.25584 946.497126 87665.92 0.56387 0.00026742 0.90755 0.00043041 1.4714 0.00069783 474.255837083302 478.262954036091 44.44 0.80109 44.44 44.061 44.862 0 240 71 6 0 0 0 0.0011452 2 23809 89.355 50.933 1 1.3813 1.5083 0 50681000 20503000 30179000 30532 907 11601 11917 47568;47569 47569 SDLTVDAVK 9 1 0 Unmodified _SDLTVDAVK_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8;H7C1M8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.2563 2 474.25584 946.497126 88311.02 1.1517 0.00054621 0.99612 0.00047241 2.1478 0.0010186 474.255689160002 478.263292938087 43.72 0.829 43.72 43.399 44.228 0 227 68 6 0 0 0 0.0010484 2 23763 90.709 57.27 1 1.7342 1.9559 0 62513000 23317000 39196000 30533 907 11601 11917 47570;47571 47571 SDLTVDAVK 9 1 0 Unmodified _SDLTVDAVK_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8;H7C1M8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.263 2 474.25584 946.497126 88261.13 -0.0097279 -4.6135E-06 1.0567 0.00050116 1.047 0.00049655 474.255866125668 478.262959980697 51.168 0.85455 51.168 50.777 51.632 -3.8147E-06 256 58 6 0 0 0 0.00603 1 25190 65.224 44.704 1 1.4782 1.1675 0 6044400 2290000 3754500 30534 907 11601 11917 47572 47572 SDLTVDAVK 9 1 0 Unmodified _SDLTVDAVK_ 0 0 0 B3KMR5;Q5JTH9;A0A087X1U8;H7C1M8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.263 2 474.25584 946.497126 88317.19 0.079214 3.7568E-05 1.101 0.00052217 1.1803 0.00055974 474.25589654536 478.263047047813 51.445 0.78596 51.445 51.057 51.843 -3.8147E-06 244 54 6 0 0 0 0.032187 1 24735 45.161 28.385 1 1.5064 1.2336 0 4932200 1828100 3104100 30535 907 11601 11917 47573 47573 SDMYILNESLTDPAIVK 17 1 0 Oxidation (M) _SDM(ox)YILNESLTDPAIVK_ SDM(1)YILNESLTDPAIVK SDM(71.18)YILNESLTDPAIVK 0 1 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 962.9814 2 962.982249 1923.94994 64164.49 0.34024 0.00032765 0.48659 0.00046857 0.82683 0.00079622 962.982188746176 966.989883208727 107.87 0.39767 107.87 107.68 108.08 0 122 29 6 0 0 0 3.3339E-05 2 67302 71.176 71.176 1 1.3431 1.3959 0 12458000 5299000 7158700 30536 1676 11602 11918 47574;47575 47575 1475 SDMYILNESLTDPAIVK 17 1 0 Oxidation (M) _SDM(ox)YILNESLTDPAIVK_ SDM(1)YILNESLTDPAIVK SDM(85.55)YILNESLTDPAIVK 0 1 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.9908 2 962.982249 1923.94994 63801.85 0.67156 0.0006467 -0.046546 -4.4823E-05 0.62501 0.00060188 962.981834512266 966.989680294057 107.3 0.34009 107.3 107.16 107.5 0 79 22 5 0 0 0 5.2175E-06 2 68536 85.554 79.834 1 1.2876 1.3404 0 11086000 3316600 7769000 30537 1676 11602 11918 47576;47577 47577 1475 SDMYILNESLTDPAIVK 17 1 0 Oxidation (M) _SDM(ox)YILNESLTDPAIVK_ SDM(1)YILNESLTDPAIVK SDM(40.07)YILNESLTDPAIVK 0 1 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 967.4921 2 962.982249 1923.94994 63134.84 0.38289 0.00036871 0.31238 0.00030081 0.69526 0.00066953 963.483543762798 966.990319237048 118.91 0.38742 118.91 118.7 119.09 0 69 16 6 0 0 0 0.00075029 1 69372 40.066 40.066 1 0.65064 0.5087 0 3703200 1994900 1708300 30538 1676 11602 11918 47578 47578 1475 SDMYILNESLTDPAIVK 17 1 0 Unmodified _SDMYILNESLTDPAIVK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 959.4525 2 954.984792 1907.95503 63433.68 0.35983 0.00034363 -0.0081714 -7.8035E-06 0.35165 0.00033582 954.985627115196 959.493746798523 127.46 0.36391 127.46 127.26 127.62 0 72 14 8 0 0 0 0.0017331 1 76759 38.769 38.769 1 1.2691 1.0626 0 1643100 607960 1035100 30539 1676 11602 11919 47579 47579 SDMYILNESLTDPAIVK 17 1 0 Unmodified _SDMYILNESLTDPAIVK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 955.4854 2 954.984792 1907.95503 65004.39 0.40322 0.00038507 0.34863 0.00033294 0.75185 0.00071801 954.984261678779 959.494394650962 127.27 0.37623 127.27 127.12 127.5 0 58 15 6 0 0 0 0.0011273 1 75801 43.03 43.03 1 1.3863 1.0967 0 3952700 1889800 2062900 30540 1676 11602 11919 47580 47580 SDPDHLAELVK 11 1 0 Unmodified _SDPDHLAELVK_ 0 0 0 A0A0A0MRM8;A0A0D9SGC1;E7EW20;Q9UM54 A0A0A0MRM8 A0A0A0MRM8 MYO6 Unconventional myosin-VI MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.3221 2 612.31696 1222.61937 81178.79 0.42974 0.00026314 0.37784 0.00023136 0.80758 0.00049449 612.317312853088 616.323959226146 59.328 0.27537 59.328 59.16 59.436 0 67 21 5 0 0 0 0.032634 1 33750 37.556 25.962 1 1.5323 1.5563 0 6480100 2741700 3738400 30541 467 11603 11920 47581 47581 SDPGLLTNTMDVFVK 15 1 0 Oxidation (M) _SDPGLLTNTM(ox)DVFVK_ SDPGLLTNTM(1)DVFVK SDPGLLTNTM(65.84)DVFVK 0 1 0 P78527;H0YG84 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.9212 2 826.913638 1651.81272 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.769 1 99.769 99.269 100.27 0 0 0 0 0.00068881 1 61116 65.842 48.816 1 30542 1665 11604 11921 47582 47582 1462 SDPGLLTNTMDVFVK 15 1 0 Oxidation (M) _SDPGLLTNTM(ox)DVFVK_ SDPGLLTNTM(1)DVFVK SDPGLLTNTM(44.85)DVFVK 0 1 0 P78527;H0YG84 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 826.9142 2 826.913638 1651.81272 NaN NaN NaN 0.40294 0.00033319 NaN NaN NaN NaN 112.44 0.57549 112.44 112.23 112.81 0 0 0 0 0.005317 1 65343 44.847 32.08 1 NaN NaN 0 3590700 3590700 0 30543 1665 11604 11921 47583 47583 1462 SDPGLLTNTMDVFVK 15 1 0 Oxidation (M) _SDPGLLTNTM(ox)DVFVK_ SDPGLLTNTM(1)DVFVK SDPGLLTNTM(50.79)DVFVK 0 1 0 P78527;H0YG84 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.4158 2 826.913638 1651.81272 NaN NaN NaN -0.51046 -0.00042211 NaN NaN NaN NaN 112.64 0.45757 112.64 112.52 112.98 0 0 0 0 0.0032147 1 65424 50.786 28.588 1 NaN NaN 0 3712300 3712300 0 30544 1665 11604 11921 47584 47584 1462 SDPLGSTQDHALSQESSEPGCR 22 0 1 Unmodified _SDPLGSTQDHALSQESSEPGCR_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.0165 3 786.68027 2357.01898 68103.16 0.36482 0.00028699 0.043883 3.4522E-05 0.4087 0.00032152 787.014628385917 790.350720893528 52.247 0.46734 52.247 52.06 52.527 0 181 37 8 0 0 0 0.00045123 1 25787 33.676 32.669 1 2.1496 1.7956 0 3291600 836090 2455500 30545 1835 11605 11922 47585 47585 SDPLGSTQDHALSQESSEPGCR 22 0 1 Unmodified _SDPLGSTQDHALSQESSEPGCR_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.0145 3 786.68027 2357.01898 68902.56 0.47526 0.00037388 -0.13369 -0.00010517 0.34157 0.00026871 787.014425585691 790.350360543947 52.902 0.44036 52.902 52.675 53.116 3.8147E-06 173 32 7 0 0 0 0.0077737 2 25603 22.409 21.958 1 1.9313 1.6564 0 2827100 1123500 1703600 30546 1835 11605 11922 47586;47587 47587 SDPLLIGIPTSENPFK 16 1 0 Unmodified _SDPLLIGIPTSENPFK_ 0 0 0 Q53GD1;Q9UBI6 Q53GD1 Q53GD1 GNG12 Guanine nucleotide-binding protein subunit gamma;Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.4711 2 864.464352 1726.91415 65479.78 0.98374 0.00085041 -0.70782 -0.00061189 0.27592 0.00023852 864.464184875978 868.470835211611 121.93 0.44868 121.93 121.75 122.2 0 139 30 7 0 0 0 2.1335E-08 2 78824 100.55 100.55 1 1.3329 1.3559 0 13983000 5169600 8813400 30547 1787 11606 11923 47588;47589 47588 SDPLLIGIPTSENPFK 16 1 0 Unmodified _SDPLLIGIPTSENPFK_ 0 0 0 Q53GD1;Q9UBI6 Q53GD1 Q53GD1 GNG12 Guanine nucleotide-binding protein subunit gamma;Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.4712 2 864.464352 1726.91415 66565.21 0.98059 0.00084769 -0.40027 -0.00034602 0.58032 0.00050167 864.965512427182 868.972353271868 121.47 0.37631 121.47 121.29 121.67 0 143 28 6 0 0 0 1.4862E-06 2 80382 95.401 95.401 1 1.3726 1.3855 0 16294000 7322700 8971500 30548 1787 11606 11923 47590;47591 47590 SDPNRETDDTLVLSFVGQTR 20 0 2 Unmodified _SDPNRETDDTLVLSFVGQTR_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.3772 3 750.704744 2249.0924 68621.95 0.72601 0.00054502 0.20864 0.00015663 0.93466 0.00070165 750.704991963247 757.377496764309 103.51 0.78738 103.51 103.2 103.99 0 386 64 7 0 0 0 6.6504E-07 2 63954 74.364 74.364 1 0.70546 0.76723 0 52323000 30351000 21972000 30549 1770 11607 11924 47592;47593 47593 SDPNRETDDTLVLSFVGQTR 20 0 2 Unmodified _SDPNRETDDTLVLSFVGQTR_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.7108 3 750.704744 2249.0924 69922.26 0.93323 0.00070058 -0.1342 -0.00010074 0.79903 0.00059984 751.038942453736 757.37678722981 102.72 0.77936 102.72 102.33 103.11 0 404 61 9 0 0 0 1.6109E-06 2 64727 61.181 61.181 1 0.69791 0.80578 0 67054000 41261000 25793000 30550 1770 11607 11924 47594;47595 47594 SDPNRETDDTLVLSFVGQTR 20 0 2 Unmodified _SDPNRETDDTLVLSFVGQTR_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.7052 3 750.704744 2249.0924 69803.23 0.89799 0.00067413 0.17209 0.00012919 1.0701 0.00080332 751.039129001524 757.37699941315 114.95 0.81144 114.95 114.64 115.45 0 255 36 11 0 0 0 2.2742E-06 1 67139 57.496 57.496 1 1.2263 0.99479 0 47131000 20466000 26665000 30551 1770 11607 11924 47596 47596 SDPNRETDDTLVLSFVGQTR 20 0 2 Unmodified _SDPNRETDDTLVLSFVGQTR_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5;B7Z859 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.0394 3 750.704744 2249.0924 69796.97 0.66551 0.0004996 0.23712 0.00017801 0.90263 0.00067761 751.039239645118 757.711299442875 114.79 0.71878 114.79 114.52 115.24 0 250 32 11 0 0 0 2.8634E-06 2 66158 54.223 54.223 1 1.1909 1.114 0 41629000 18239000 23389000 30552 1770 11607 11924 47597;47598 47597 SDPYLEFHK 9 1 0 Unmodified _SDPYLEFHK_ 0 0 0 A0A024R994;O75131;Q05DL8;A0A087WYQ3 A0A024R994 A0A024R994 CPNE3 Copine-3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.2746 2 568.274564 1134.53457 NaN NaN NaN 0.60547 0.00034407 NaN NaN NaN NaN 45.317 0.4426 45.317 45.111 45.553 0 0 0 0 0.0083436 1 24878 68.383 49.288 1 NaN NaN 0 8336200 8336200 0 30553 271 11608 11925 47599 47599 SDQDYILK 8 1 0 Unmodified _SDQDYILK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08;F8VR77;H0YIN7;F8W0A3;F8VZ69 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2552 2 491.248015 980.481476 NaN NaN NaN 0.56649 0.00027829 NaN NaN NaN NaN 46.134 0.64199 46.134 45.777 46.419 0 0 0 0 0.0074897 1 25294 82.452 56.558 1 NaN NaN 0 12001000 0 12001000 30554 328 11609 11926 47600 47600 SDQDYILK 8 1 0 Unmodified _SDQDYILK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08;F8VR77;H0YIN7;F8W0A3;F8VZ69 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2553 2 491.248015 980.481476 88767.64 0.090374 4.4396E-05 0.54925 0.00026982 0.63963 0.00031422 491.248314959643 495.2552440762 54.183 0.64637 54.183 53.868 54.514 -3.8147E-06 133 47 4 0 0 0 0.053707 1 26397 42.396 29.129 1 1.544 1.3589 0 963330 370060 593270 30555 328 11609 11926 47601 47601 SDQEAKPSTEDLGDKK 16 3 0 Acetyl (Protein N-term) _(ac)SDQEAKPSTEDLGDKK_ 1 0 2 B8ZZJ0;B9A032;A0A024R3Z2;B8ZZN6;P63165 B8ZZJ0 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.3016 3 597.286527 1788.83775 78967.19 0.32146 0.000192 0.87618 0.00052333 1.1976 0.00071534 597.287337226262 605.301081118696 25.946 0.42836 25.946 25.737 26.166 1.9073E-06 72 17 7 0 0 0 7.7281E-05 1 9647 54.004 54.004 1 1.4974 1.4024 0 3720800 1538400 2182400 30556 144 11610 11927 47602 47602 SDQNLQTALELTR 13 0 1 Unmodified _SDQNLQTALELTR_ 0 0 0 O95373;B3KQG6 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.8912 2 744.886269 1487.75799 71127.28 0.69552 0.00051808 -0.10497 -7.8192E-05 0.59055 0.00043989 744.885774737211 749.890489855773 85.827 0.67046 85.827 85.454 86.125 0 231 57 5 0 0 0 0.00014246 1 51438 97.911 97.911 1 2.0805 2.1676 0 21230000 7672800 13557000 30557 1424 11611 11928 47603 47603 SDQNLQTALELTR 13 0 1 Unmodified _SDQNLQTALELTR_ 0 0 0 O95373;B3KQG6 O95373 O95373 IPO7 Importin-7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.8906 2 744.886269 1487.75799 NaN NaN NaN -0.13931 -0.00010377 NaN NaN NaN NaN 84.89 0.55914 84.89 84.631 85.19 7.6294E-06 0 0 0 0.00025316 1 52049 88.338 79.383 1 NaN NaN 0 22402000 0 22402000 30558 1424 11611 11928 47604 47604 SDQSYVISFVVPNQK 15 1 0 Unmodified _SDQSYVISFVVPNQK_ 0 0 0 Q8TAF6;O60488;B4DH39 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 859.9462 2 855.938502 1709.86245 67470.81 0.87939 0.00075271 0.036721 3.1431E-05 0.91611 0.00078414 856.439572454464 859.945933222188 106.47 0.49037 106.47 106.21 106.7 0 128 35 6 0 0 0 0.00018957 3 66015 77.062 77.062 1 1.7758 1.8431 0 11357000 4872700 6484400 30559 1394 11612 11929 47605;47606;47607 47605 SDQVNGVLVLSLLDK 15 1 0 Unmodified _SDQVNGVLVLSLLDK_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.4601 2 800.451245 1598.88794 69273.2 1.101 0.00088133 -0.075862 -6.0724E-05 1.0252 0.0008206 800.451167416416 804.458201028675 126.13 0.63989 126.13 125.85 126.49 -7.6294E-06 261 49 8 0 0 0 9.5307E-06 2 81953 93.348 93.348 1 0.93843 0.92021 0 22607000 11612000 10994000 30560 1017 11613 11930 47608;47609 47608 SDQVNGVLVLSLLDK 15 1 0 Unmodified _SDQVNGVLVLSLLDK_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.4593 2 800.451245 1598.88794 69380.66 1.0013 0.00080151 0.00070614 5.6523E-07 1.002 0.00080207 800.451227975801 804.458242306802 125.74 0.46486 125.74 125.44 125.91 0 154 31 8 0 0 0 4.5804E-17 1 83704 137.84 137.84 1 0.95471 0.97537 0 25793000 13746000 12048000 30561 1017 11613 11930 47610 47610 SDQYGRVFTSWTGGGAAASR 20 0 2 Unmodified _SDQYGRVFTSWTGGGAAASR_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.3301 3 691.996081 2072.96642 NaN NaN NaN -0.13767 -9.5264E-05 NaN NaN NaN NaN 77.365 0.78658 77.365 77.026 77.813 7.6294E-06 0 0 0 5.2997E-10 1 45715 62.611 52.823 1 NaN NaN 0 10156000 10156000 0 + 30562 1163 11614 11931 47611 47611 SDRPAYVTILSLVR 14 0 2 Unmodified _SDRPAYVTILSLVR_ 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.6383 3 530.638507 1588.89369 82488.34 0.62735 0.0003329 -0.22847 -0.00012123 0.39888 0.00021166 530.63824621432 537.310393517081 124.12 0.44065 124.12 123.84 124.28 0 70 16 6 0 0 0 0.0086576 1 73353 34.302 34.302 1 1.7688 1.6007 0 4222900 1458000 2764900 30563 135 11615 11932 47612 47612 SDSEDICLFTK 11 1 0 Unmodified _SDSEDICLFTK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.8056 2 657.797743 1313.58093 73260.77 0.63818 0.0004198 -0.047957 -3.1546E-05 0.59023 0.00038825 657.797757885294 661.804855284043 79.326 1.1795 79.326 78.785 79.964 0 733 105 13 0 0 0 1.2129E-12 2 46822 145.25 118.25 1 0.61999 0.72299 0 268050000 163910000 104140000 30564 1415 11616 11933 47613;47614 47613 SDSEDICLFTK 11 1 0 Unmodified _SDSEDICLFTK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.7986 2 657.797743 1313.58093 73700.59 0.37243 0.00024498 0.21072 0.00013861 0.58315 0.00038359 657.797964039795 661.805011646366 78.258 1.0675 78.258 77.852 78.92 0 682 92 12 0 0 0 5.8219E-05 1 47275 98.943 80.404 1 0.61074 0.71805 0 365240000 222420000 142830000 30565 1415 11616 11933 47615 47615 SDSEDICLFTK 11 1 0 Unmodified _SDSEDICLFTK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.7985 2 657.797743 1313.58093 73162.06 0.68911 0.00045329 0.11415 7.5086E-05 0.80325 0.00052838 657.797992770331 661.80493185768 90.465 1.3858 90.465 89.975 91.361 0 624 90 11 0 0 0 2.2671E-05 1 49972 103.88 90.501 1 0.72596 0.62968 0 128770000 75700000 53069000 30566 1415 11616 11933 47616 47616 SDSEDICLFTK 11 1 0 Unmodified _SDSEDICLFTK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.8051 2 657.797743 1313.58093 72849.14 0.47532 0.00031266 -0.015575 -1.0245E-05 0.45975 0.00030242 657.797912889963 661.804838353835 90.471 1.555 90.471 89.967 91.522 0 575 101 11 0 0 0 0.0003695 2 49100 83.869 77.564 1 0.7256 0.62035 0 110910000 65223000 45685000 30567 1415 11616 11933 47617;47618 47617 SDSFENPVLQQHFR 14 0 1 Unmodified _SDSFENPVLQQHFR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.61 3 568.609387 1702.80633 79299.3 0.36848 0.00020952 -0.16897 -9.6079E-05 0.19951 0.00011344 568.609469785689 571.945060835969 74.661 1.2466 74.661 74.238 75.485 0 642 101 11 0 0 0 4.1988E-05 4 43681 56.286 56.286 1 0.36731 0.4348 0 363820000 256070000 107750000 30568 82 11617 11934 47619;47620;47621;47622 47619 SDSFENPVLQQHFR 14 0 1 Unmodified _SDSFENPVLQQHFR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.4113 2 852.410443 1702.80633 64478.68 0.44224 0.00037697 0.79183 0.00067496 1.2341 0.0010519 852.411563278285 857.413982234087 74.678 0.67873 74.678 74.359 75.038 0 337 55 9 0 0 0 1.8892E-83 2 43790 218.18 210.32 1 0.36287 0.41421 0 122280000 87965000 34312000 30569 82 11617 11934 47623;47624 47624 SDSFENPVLQQHFR 14 0 1 Unmodified _SDSFENPVLQQHFR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.9437 3 568.609387 1702.80633 78874.35 0.61166 0.00034779 -0.38604 -0.0002195 0.22562 0.00012829 568.609395648248 571.944928196595 73.267 1.2224 73.267 72.799 74.021 0 595 100 11 0 0 0 4.4395E-07 2 43849 82.202 82.202 1 0.36829 0.42908 0 454160000 327310000 126850000 30570 82 11617 11934 47625;47626 47625 SDSFENPVLQQHFR 14 0 1 Unmodified _SDSFENPVLQQHFR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.9124 2 852.410443 1702.80633 64963.4 0.63555 0.00054175 0.71617 0.00061047 1.3517 0.0011522 852.411816061488 857.414465546685 73.253 1.0837 73.253 73.017 74.101 0 399 90 9 0 0 0 1.4649E-14 3 43854 133.23 129.37 1 0.35351 0.40341 0 143500000 101950000 41548000 30571 82 11617 11934 47627;47628;47629 47628 SDSFENPVLQQHFR 14 0 1 Unmodified _SDSFENPVLQQHFR_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.9442 3 568.609387 1702.80633 78661.66 0.57166 0.00032505 -0.019692 -1.1197E-05 0.55196 0.00031385 568.609634686499 571.945005148072 85.238 1.4313 85.238 84.75 86.181 0 497 90 11 0 0 0 0.0013837 1 45655 37.55 37.55 1 0.27127 0.23668 0 54405000 42743000 11662000 30572 82 11617 11934 47630 47630 SDSGQQQPSSVGNQSHSASDPGPIR 25 0 1 Unmodified _SDSGQQQPSSVGNQSHSASDPGPIR_ 0 0 0 F2Z2U4;Q59FH1;H0Y4W2 F2Z2U4 F2Z2U4 TRRAP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.0543 3 841.720005 2522.13818 68670.95 0.3827 0.00032213 0.19166 0.00016132 0.57436 0.00048345 842.054500616883 845.391009500929 26.338 0.19996 26.338 26.234 26.433 0 34 12 5 0 0 0 0.029013 2 11808 15.499 12.49 1 0.66687 0.67389 0 9904600 5641800 4262800 30573 1253 11618 11935 47631;47632 47631 SDSGTAAQTSLDIDK 15 1 0 Unmodified _SDSGTAAQTSLDIDK_ 0 0 0 A0A024R7R0;Q96RL1;Q9NTC5;A0A024R7S2 A0A024R7R0 A0A024R7R0 RAP80;UIMC1;DKFZp434I1926 BRCA1-A complex subunit RAP80 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.8576 2 754.857374 1507.7002 70345.73 0.5018 0.00037879 0.56529 0.00042672 1.0671 0.0008055 754.857218401421 758.86467256211 45.86 0.30753 45.86 45.672 45.979 0 62 26 4 0 0 0 0.00060004 1 25192 54.023 54.023 1 0.67433 0.68001 0 7712000 4918800 2793200 30574 233 11619 11936 47633 47633 SDSHPSDALTR 11 0 1 Unmodified _SDSHPSDALTR_ 0 0 0 Q53HR2;B4DEA8;P49748;J3QKU9;K7EQP4;B4DYY0;K7EJW8 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.2825 2 593.278366 1184.54218 77748.09 0.60288 0.00035767 -0.45183 -0.00026806 0.15105 8.9615E-05 593.278046649036 598.28257068246 18.46 0.18611 18.46 18.353 18.539 0 18 6 4 0 0 0 0.00041575 1 5399 80.24 64.037 1 1.3237 1.3776 0 21915000 7324700 14590000 30575 965 11620 11937 47634 47634 SDSVVLVSQSR 11 0 1 Unmodified _SDSVVLVSQSR_ 0 0 0 Q9NSI6;H7BZR9 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.8188 2 588.814584 1175.61462 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.802 1 52.802 52.302 53.302 0 0 0 0 0.029573 1 25560 49.189 37.596 1 30576 2068 11621 11938 47635 47635 SDSYVELSQYR 11 0 1 Unmodified _SDSYVELSQYR_ 0 0 0 F8WE41;Q7Z3W9;P52298 F8WE41 F8WE41 NCBP2;DKFZp686G18222 Nuclear cap-binding protein subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.8199 2 673.814781 1345.61501 NaN NaN NaN 0.83027 0.00055945 NaN NaN NaN NaN 65.686 0.32274 65.686 65.52 65.842 0 0 0 0 0.0021686 1 37904 77.192 65.598 1 NaN NaN 0 5210700 0 5210700 30577 1269 11622 11939 47636 47636 SDTLPLATR 9 0 1 Unmodified _SDTLPLATR_ 0 0 0 Q15269;A0A0B4J2E5;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.2694 2 487.269281 972.52401 85712.59 -0.16757 -8.1654E-05 -0.10635 -5.1822E-05 -0.27393 -0.00013348 487.269515599034 492.273570079318 53.006 0.93803 53.006 52.423 53.361 0 332 70 7 0 0 0 0.0015501 2 29472 83.948 56.432 1 0.96954 1.1444 0 248230000 130400000 117830000 30578 1756 11623 11940 47637;47638 47638 SDTLPLATR 9 0 1 Unmodified _SDTLPLATR_ 0 0 0 Q15269;A0A0B4J2E5;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2736 2 487.269281 972.52401 86205.33 0.11409 5.5591E-05 -0.58294 -0.00028405 -0.46885 -0.00022846 487.269233247918 492.273393094146 51.719 0.98004 51.719 51.163 52.143 0 329 76 6 0 0 0 0.00016983 2 29256 107.57 85.893 1 0.91782 1.0615 0 265680000 150380000 115300000 30579 1756 11623 11940 47639;47640 47640 SDTLPLATR 9 0 1 Unmodified _SDTLPLATR_ 0 0 0 Q15269;A0A0B4J2E5;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.2731 2 487.269281 972.52401 85683.18 0.10247 4.993E-05 -0.0442 -2.1537E-05 0.058269 2.8393E-05 487.269094452051 492.273286037175 60.233 0.78323 60.233 59.889 60.672 0 267 59 6 0 0 0 0.016543 2 30728 53.775 40.196 1 1.1717 0.9657 0 18417000 8823700 9592800 30580 1756 11623 11940 47641;47642 47642 SDTLPLATR 9 0 1 Unmodified _SDTLPLATR_ 0 0 0 Q15269;A0A0B4J2E5;C9J544 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.2735 2 487.269281 972.52401 86799.77 0.16962 8.2649E-05 0.031101 1.5154E-05 0.20072 9.7803E-05 487.269131315308 492.273375999162 60.595 0.81903 60.595 60.268 61.087 0 320 67 6 0 0 0 0.0067422 1 30331 63.419 45.433 1 1.1839 0.97891 0 14716000 6450200 8265900 30581 1756 11623 11940 47643 47643 SDTYYQSPTGDR 12 0 1 Unmodified _SDTYYQSPTGDR_ 0 0 0 A0A0A0MS90;A8K654;B4DI41;Q9UIS9;B4DUR3 A0A0A0MS90 A0A0A0MS90 MBD1 Methyl-CpG-binding domain protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.3001 2 695.299495 1388.58444 74052.99 0.79841 0.00055513 0.61571 0.00042811 1.4141 0.00098324 695.299251198688 700.30356439627 28.846 0.43406 28.846 28.589 29.023 0 97 22 7 0 0 0 5.0057E-18 1 13678 145.25 141.68 1 0.78816 0.82795 0 11693000 6007600 5685300 30582 477 11624 11941 47644 47644 SDTYYQSPTGDR 12 0 1 Unmodified _SDTYYQSPTGDR_ 0 0 0 A0A0A0MS90;A8K654;B4DI41;Q9UIS9;B4DUR3 A0A0A0MS90 A0A0A0MS90 MBD1 Methyl-CpG-binding domain protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.3002 2 695.299495 1388.58444 73919.25 0.60851 0.0004231 0.1925 0.00013385 0.80101 0.00055694 695.299382020054 700.303837964854 28.045 0.23689 28.045 27.935 28.172 0 52 13 6 0 0 0 3.8051E-13 2 13245 135.43 135.43 1 0.80103 0.80434 0 19117000 11049000 8068100 30583 477 11624 11941 47645;47646 47646 SDTYYQSPTGDR 12 0 1 Unmodified _SDTYYQSPTGDR_ 0 0 0 A0A0A0MS90;A8K654;B4DI41;Q9UIS9;B4DUR3 A0A0A0MS90 A0A0A0MS90 MBD1 Methyl-CpG-binding domain protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 700.3038 2 695.299495 1388.58444 72737.45 0.24112 0.00016765 1.8526 0.0012881 2.0937 0.0014558 695.803731514524 700.303729912978 32.801 0.36321 32.801 32.573 32.936 0 76 17 6 0 0 0 0.035895 1 14188 34.953 30.012 1 0.65208 0.55459 0 5346400 2616700 2729700 30584 477 11624 11941 47647 47647 SDTYYQSPTGDR 12 0 1 Unmodified _SDTYYQSPTGDR_ 0 0 0 A0A0A0MS90;A8K654;B4DI41;Q9UIS9;B4DUR3 A0A0A0MS90 A0A0A0MS90 MBD1 Methyl-CpG-binding domain protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.3045 2 695.299495 1388.58444 NaN NaN NaN -0.060587 -4.2126E-05 NaN NaN NaN NaN 33.179 0.37022 33.179 32.921 33.292 0 0 0 0 0.0048721 1 13988 63.184 58.886 1 NaN NaN 0 1297300 0 1297300 30585 477 11624 11941 47648 47648 SDVEAIFSK 9 1 0 Unmodified _SDVEAIFSK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.2632 2 498.25584 994.497126 86300.16 0.18843 9.3889E-05 0.47037 0.00023437 0.65881 0.00032826 498.255987773406 502.263115207291 68.711 1.5387 68.711 68.195 69.733 0 568 132 7 0 0 0 0.0054512 1 39687 66.692 49.916 1 1.0896 1.2263 0 119940000 53924000 66013000 30586 837;781 11625 11942 47649 47649 SDVEAIFSK 9 1 0 Unmodified _SDVEAIFSK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.256 2 498.25584 994.497126 86370.98 0.12096 6.027E-05 0.33641 0.00016762 0.45738 0.00022789 498.256002811336 502.262965823166 67.5 1.2672 67.5 67.097 68.364 0 389 103 7 0 0 0 0.00603 2 39814 65.224 56.692 1 1.0571 1.2225 0 201250000 92003000 109250000 30587 837;781 11625 11942 47650;47651 47651 SDVEAIFSK 9 1 0 Unmodified _SDVEAIFSK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.256 2 498.25584 994.497126 86602.72 0.23894 0.00011905 0.30117 0.00015006 0.54011 0.00026911 498.255879291968 502.263040496545 78.509 1.2462 78.509 78.034 79.28 0 349 77 7 0 0 0 0.0062323 1 42066 64.711 47.935 1 0.61024 0.47801 0 11595000 7078300 4517100 30588 837;781 11625 11942 47652 47652 SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR 30 0 1 Unmodified _SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 967.4254 3 963.418608 2887.23399 NaN NaN NaN 1.688 0.0016263 NaN NaN NaN NaN 34.004 0.062309 34.004 33.982 34.044 0 0 0 0 0.036933 1 17159 23.149 20.708 1 NaN NaN 0 1592600 0 1592600 30589 118 11626 11943 47653 47653 SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR 30 0 1 Unmodified _SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 967.0896 3 963.418608 2887.23399 62346.25 -0.19384 -0.00018675 0.54111 0.00052131 0.34727 0.00033457 963.75304441213 967.089617323291 41.73 0.25139 41.73 41.592 41.844 0 128 18 10 0 0 0 0.029122 1 18852 13.39 13.39 1 1.2638 1.1126 0 2479400 1000700 1478700 30590 118 11626 11943 47654 47654 SEAHTADGISIR 12 0 1 Unmodified _SEAHTADGISIR_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 422.8821 3 419.545836 1255.61568 92531.31 -0.43731 -0.00018347 0.53605 0.0002249 0.098746 4.1429E-05 419.545864449271 422.882245154518 32.875 0.21811 32.875 32.759 32.977 0 28 8 5 0 0 0 0.014355 1 13846 23.711 18.557 1 0.51501 0.45304 0 3623500 2204700 1418800 30591 1589 11627 11944 47655 47655 SEAPETPMEEEAELVLTEK 19 1 0 Oxidation (M) _SEAPETPM(ox)EEEAELVLTEK_ SEAPETPM(1)EEEAELVLTEK SEAPETPM(80.75)EEEAELVLTEK 0 1 0 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1074.4977 2 1074.49866 2146.98276 59440.31 0.43215 0.00046434 -0.23177 -0.00024904 0.20038 0.0002153 1074.9999449857 1079.00711019605 93.341 0.71513 93.341 92.917 93.632 0 338 59 7 0 0 0 2.3026E-06 3 56395 80.746 70.102 1 1.7334 1.7016 0 23008000 9081900 13926000 30592 907 11628 11945 47656;47657;47658 47658 734 SEAPETPMEEEAELVLTEK 19 1 0 Oxidation (M) _SEAPETPM(ox)EEEAELVLTEK_ SEAPETPM(1)EEEAELVLTEK SEAPETPM(105.03)EEEAELVLTEK 0 1 0 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1078.5027 2 1074.49866 2146.98276 59557.22 0.31457 0.00033801 -0.25635 -0.00027545 0.058224 6.2562E-05 1074.49831184235 1079.00700446659 92.545 0.62807 92.545 92.258 92.886 -7.6294E-06 268 51 7 0 0 0 2.5723E-12 2 57181 105.03 99.875 1 1.7121 1.9279 0 57945000 18763000 39182000 30593 907 11628 11945 47659;47660 47659 734 SEAPSYIAVPDPSVLK 16 1 0 Unmodified _SEAPSYIAVPDPSVLK_ 0 0 0 Q9UQR0 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 836.9425 2 836.943253 1671.87195 65829.5 0.53882 0.00045096 -1.5865 -0.0013278 -1.0477 -0.00087687 836.941461324929 840.950223658268 117.44 0.4687 117.44 117.25 117.72 -7.6294E-06 78 21 6 0 0 0 0.016503 2 69209 30.438 24.714 1 0.80857 0.63094 0 3781000 2092400 1688600 30594 2118 11629 11946 47661;47662 47662 SEASLHPVLMSEAPWNTR 18 0 1 Oxidation (M) _SEASLHPVLM(ox)SEAPWNTR_ SEASLHPVLM(1)SEAPWNTR SEASLHPVLM(52.73)SEAPWNTR 0 1 0 Q6FI97;Q53FS0;O96019;H7C5S0 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3325 3 680.998435 2039.97347 74011.26 0.48657 0.00033135 0.51403 0.00035006 1.0006 0.00068141 681.332321435781 684.337148152338 78.621 0.9071 78.621 78.013 78.92 0 198 78 5 0 0 0 1.7094E-05 1 47664 52.731 52.731 1 1.1349 1.2305 0 27764000 13425000 14338000 30595 1434 11630 11947 47663 47663 1130 SEATDGGFTSQIR 13 0 1 Unmodified _SEATDGGFTSQIR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8281 2 684.823138 1367.63172 74363.78 0.17334 0.00011871 -0.70978 -0.00048607 -0.53644 -0.00036737 684.822509929148 689.827128398928 47.757 0.32758 47.757 47.604 47.932 0 61 23 5 0 0 0 9.028E-06 2 26585 101.3 87.088 1 1.1638 1.237 0 24168000 10687000 13480000 30596 1984 11631 11948 47664;47665 47664 SEATDGGFTSQIR 13 0 1 Unmodified _SEATDGGFTSQIR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.9062 2 684.823138 1367.63172 74347.04 0.58906 0.0004034 -0.13597 -9.3112E-05 0.45309 0.00031029 684.823537963117 689.827272870582 56.618 0.51414 56.618 56.408 56.922 -3.8147E-06 126 32 6 0 0 0 0.035117 1 28510 52.391 47.925 1 3.5812 2.9948 0 3787300 923030 2864300 30597 1984 11631 11948 47666 47666 SEATFQFTVER 11 0 1 Unmodified _SEATFQFTVER_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;F5H2X1;B7Z842;H3BUV0;H3BTM1;H3BRA2;H3BQD1;H3BMF6 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.82 2 657.819867 1313.62518 NaN NaN NaN -1.3673 -0.00089941 NaN NaN NaN NaN 90.159 0.71384 90.159 89.668 90.381 0 0 0 0 0.00303 1 49751 68.893 49.106 1 NaN NaN 0 2283900 2283900 0 30598 1954 11632 11949 47667 47667 SEAVVEYVFSGSR 13 0 1 Unmodified _SEAVVEYVFSGSR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.3519 2 715.351531 1428.68851 NaN NaN NaN -1.2458 -0.00089116 NaN NaN NaN NaN 91.531 0.91254 91.531 91.076 91.989 0 0 0 0 0.0038289 1 56519 74.76 64.451 1 NaN NaN 0 15549000 15549000 0 30599 618 11633 11950 47668 47668 SEAVVEYVFSGSR 13 0 1 Unmodified _SEAVVEYVFSGSR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.3548 2 715.351531 1428.68851 71339.18 0.74985 0.0005364 -0.98984 -0.00070808 -0.23999 -0.00017168 715.350167569635 720.355157768314 105.63 0.66142 105.63 105.4 106.06 7.6294E-06 112 39 5 0 0 0 0.0020343 3 60218 55.401 48.272 1 0.74132 0.62267 0 4296800 2643100 1653800 30600 618 11633 11950 47669;47670;47671 47669 SECLNNIGDSSPLIR 15 0 1 Unmodified _SECLNNIGDSSPLIR_ 0 0 0 A0A024RAM0;Q92973;B4DSC0;E7EW37 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.4116 2 837.909418 1673.80428 66854.46 0.9187 0.00076978 -0.28151 -0.00023588 0.63719 0.00053391 838.409748113079 842.913835119919 82.796 0.51662 82.796 82.495 83.012 0 129 41 5 0 0 0 0.002921 1 49527 43.544 36.884 1 1.8001 1.807 0 17185000 4446500 12738000 30601 309 11634 11951 47672 47672 SECLNNIGDSSPLIR 15 0 1 Unmodified _SECLNNIGDSSPLIR_ 0 0 0 A0A024RAM0;Q92973;B4DSC0;E7EW37 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.4141 2 837.909418 1673.80428 NaN NaN NaN 0.015937 1.3354E-05 NaN NaN NaN NaN 81.871 0.491 81.871 81.577 82.068 0 0 0 0 0.013816 1 50039 47.712 38.28 1 NaN NaN 0 14087000 0 14087000 30602 309 11634 11951 47673 47673 SECLNNIGDSSPLIR 15 0 1 Unmodified _SECLNNIGDSSPLIR_ 0 0 0 A0A024RAM0;Q92973;B4DSC0;E7EW37 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 842.9114 2 837.909418 1673.80428 68438.23 0.60371 0.00050586 -0.66004 -0.00055306 -0.056332 -4.7201E-05 837.910810441253 843.414004054918 94.915 0.39614 94.915 94.674 95.07 7.6294E-06 65 24 4 0 0 0 0.0083147 2 52337 35.737 32.415 1 1.8583 1.6794 0 2207600 613430 1594100 30603 309 11634 11951 47674;47675 47674 SEDDESGAGELTR 13 0 1 Unmodified _SEDDESGAGELTR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.2964 2 683.291867 1364.56918 72550.71 0.64296 0.00043933 0.30016 0.0002051 0.94313 0.00064443 683.291827495377 688.296093045214 25.933 0.33559 25.933 25.78 26.115 1.9073E-06 76 16 6 0 0 0 1.6053E-49 1 11459 199.09 155.28 1 1.1289 1.19 0 40126000 18172000 21954000 30604 560 11635 11952 47676 47676 SEDDESGAGELTR 13 0 1 Unmodified _SEDDESGAGELTR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.2958 2 683.291867 1364.56918 74319.06 0.78909 0.00053918 0.25474 0.00017406 1.0438 0.00071324 683.291898954049 688.295988504336 25.594 0.30427 25.594 25.441 25.745 0 60 15 6 0 0 0 1.2528E-30 2 11216 172.8 135.08 1 1.189 1.3003 0 30560000 13085000 17475000 30605 560 11635 11952 47677;47678 47677 SEDDESGAGELTR 13 0 1 Unmodified _SEDDESGAGELTR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.2957 2 683.291867 1364.56918 73704.13 0.39882 0.00027251 -0.17281 -0.00011808 0.22601 0.00015443 683.291718266489 688.295871667143 29.316 0.35164 29.316 29.13 29.482 0 101 22 7 0 0 0 0.00035286 2 11863 63.073 52.244 1 0.82489 0.6896 0 3538700 1869900 1668800 30606 560 11635 11952 47679;47680 47679 SEDDESGAGELTR 13 0 1 Unmodified _SEDDESGAGELTR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.7929 2 683.291867 1364.56918 77446.55 0.20635 0.000141 -0.084506 -5.7742E-05 0.12184 8.3255E-05 683.291915298203 688.295838272056 29.579 0.26662 29.579 29.427 29.694 1.9073E-06 41 14 4 0 0 0 0.0086662 2 11579 43.68 32.85 1 0.72075 0.63831 0 860760 377450 483310 30607 560 11635 11952 47681;47682 47681 SEDFSLPAYMDR 12 0 1 Oxidation (M) _SEDFSLPAYM(ox)DR_ SEDFSLPAYM(1)DR SEDFSLPAYM(51.93)DR 0 1 0 P13073;Q86WV2;H3BN72;H3BNV9;H3BNI5 P13073 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.3163 2 723.813924 1445.61329 72611.86 0.84735 0.00061332 0.096933 7.0161E-05 0.94428 0.00068348 723.814023930641 728.818066362519 79.667 0.71077 79.667 79.35 80.061 0 273 61 6 0 0 0 0.0024483 2 47219 51.927 51.927 1 1.5934 1.6483 0 23371000 9811400 13560000 30608 1477 11636 11953 47683;47684 47684 1225 SEDFSLPAYMDR 12 0 1 Oxidation (M) _SEDFSLPAYM(ox)DR_ SEDFSLPAYM(1)DR SEDFSLPAYM(65.63)DR 0 1 0 P13073;Q86WV2;H3BN72;H3BNV9;H3BNI5 P13073 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.8188 2 723.813924 1445.61329 71632.39 0.65866 0.00047675 0.2552 0.00018472 0.91386 0.00066146 723.814139654227 728.818287955389 78.637 0.70229 78.637 78.359 79.061 0 280 63 6 0 0 0 0.00038748 2 47770 65.627 60.547 1 1.4518 1.5924 0 40179000 13707000 26471000 30609 1477 11636 11953 47685;47686 47686 1225 SEDGVEGDLGETQSR 15 0 1 Unmodified _SEDGVEGDLGETQSR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.8487 2 789.847538 1577.68052 68176.69 1.0682 0.00084375 0.023416 1.8495E-05 1.0917 0.00086224 789.847554489958 794.851712963758 38.161 0.52274 38.161 37.908 38.431 0 213 43 6 0 0 0 3.3001E-10 2 19474 116.71 113.18 1 1.4245 1.4773 0 37683000 14873000 22810000 30610 1696 11637 11954 47687;47688 47688 SEDGVEGDLGETQSR 15 0 1 Unmodified _SEDGVEGDLGETQSR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 794.8531 2 789.847538 1577.68052 68564.65 0.61133 0.00048286 0.16695 0.00013187 0.77829 0.00061473 789.847580340236 794.851973627558 44.131 0.63449 44.131 43.903 44.538 0 186 38 7 0 0 0 0.022338 1 20833 30.336 28.668 1 0.90915 0.76528 0 4549500 2265300 2284200 30611 1696 11637 11954 47689 47689 SEDLDNSIDK 10 1 0 Unmodified _SEDLDNSIDK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.267 2 568.259308 1134.50406 84781.5 0.56334 0.00032013 1.0211 0.00058026 1.5845 0.00090038 568.259574487017 572.267051088055 29.604 0.23312 29.604 29.53 29.763 0 60 18 6 0 0 0 0.00050021 2 14377 85.862 70.997 1 0.96545 0.98307 0 28033000 14116000 13916000 30612 803 11638 11955 47690;47691 47691 SEDLDNSIDK 10 1 0 Unmodified _SEDLDNSIDK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.2662 2 568.259308 1134.50406 81721.52 1.0089 0.00057331 -0.20625 -0.0001172 0.80264 0.00045611 568.25897660805 572.266246337843 29.19 0.42737 29.19 29.017 29.444 1.9073E-06 94 29 6 0 0 0 0.0096548 2 14031 68.76 58.303 1 0.93844 1.0216 0 39720000 19306000 20414000 30613 803 11638 11955 47692;47693 47693 SEDLLDYGPFR 11 0 1 Unmodified _SEDLLDYGPFR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;B7Z4L4 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.3132 2 656.314417 1310.61428 78389.2 0.82617 0.00054223 0.13341 8.7556E-05 0.95958 0.00062979 656.314227644084 661.318688420814 106.03 0.61306 106.03 105.71 106.32 0 191 44 6 0 0 0 0.0020494 2 65576 62.823 62.823 1 1.2623 1.3238 0 12184000 5130200 7053300 30614 1444 11639 11956 47694;47695 47695 SEDLLDYGPFR 11 0 1 Unmodified _SEDLLDYGPFR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;B7Z4L4 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.3146 2 656.314417 1310.61428 75572.83 0.82074 0.00053866 0.21444 0.00014074 1.0352 0.00067941 656.314319245464 661.318535805265 105.31 0.64758 105.31 105 105.65 0 191 46 6 0 0 0 0.00076687 2 66719 72.643 60.417 1 1.2099 1.2938 0 24921000 12008000 12913000 30615 1444 11639 11956 47696;47697 47697 SEDLLDYGPFR 11 0 1 Unmodified _SEDLLDYGPFR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;B7Z4L4 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.3148 2 656.314417 1310.61428 76604.26 0.57266 0.00037585 0.074193 4.8694E-05 0.64686 0.00042454 656.31417383526 661.318791998307 117.18 0.509 117.18 116.9 117.41 0 77 22 5 0 0 0 0.00046386 1 69010 76.465 71.852 1 0.85921 0.71843 0 3693300 1842800 1850500 30616 1444 11639 11956 47698 47698 SEDLLDYGPFR 11 0 1 Unmodified _SEDLLDYGPFR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;B4DL99;B7Z4L4 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.3149 2 656.314417 1310.61428 76878.43 0.66699 0.00043776 0.16007 0.00010506 0.82706 0.00054281 656.314641285576 661.318596811086 117.07 0.48991 117.07 116.81 117.3 0 89 22 6 0 0 0 0.00046386 2 67938 76.465 69.57 1 0.87625 0.76625 0 3554800 1834000 1720800 30617 1444 11639 11956 47699;47700 47700 SEDPDQQYLILNTAR 15 0 1 Unmodified _SEDPDQQYLILNTAR_ 0 0 0 Q96QK1;Q5HYM2 Q96QK1 Q96QK1 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.9373 2 881.933948 1761.85334 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.062 1 87.062 86.562 87.562 0 0 0 0 0.038144 1 52547 41.052 34.82 1 30618 1985 11640 11957 47701 47701 SEDQDLQGLK 10 1 0 Unmodified _SEDQDLQGLK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;B5MCB4;A0A0S2Z401;A0A0D9SFX7;D5L9I4;A0A0S2Z3U3;A0A075BPH5;A0A0D9SEX1;C9JH89;A0A0S2Z3V4 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.7772 2 566.777667 1131.54078 81542.95 0.79753 0.00045202 0.94526 0.00053575 1.7428 0.00098777 566.776749738484 570.784447031445 35.613 0.65403 35.613 35.442 36.096 0 130 62 4 0 0 0 0.00035656 2 17941 88.948 52.344 1 0.55965 0.56844 0 13670000 6776500 6893500 30619 623 11641 11958 47702;47703 47702 SEDQDLQGLK 10 1 0 Unmodified _SEDQDLQGLK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;B5MCB4;A0A0S2Z401;A0A0D9SFX7;D5L9I4;A0A0S2Z3U3;A0A075BPH5;A0A0D9SEX1;C9JH89;A0A0S2Z3V4 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.7774 2 566.777667 1131.54078 79567.59 0.74592 0.00042277 0.46066 0.00026109 1.2066 0.00068387 566.77697618052 570.784685504794 34.866 0.50682 34.866 34.657 35.163 0 96 43 4 0 0 0 0.00071336 1 17664 82.426 37.344 1 0.52971 0.52905 0 15122000 11084000 4037800 30620 623 11641 11958 47704 47704 SEDQDLQGLK 10 1 0 Unmodified _SEDQDLQGLK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;B5MCB4;A0A0S2Z401;A0A0D9SFX7;D5L9I4;A0A0S2Z3U3;A0A075BPH5;A0A0D9SEX1;C9JH89;A0A0S2Z3V4 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.7785 2 566.777667 1131.54078 80486.3 0.4096 0.00023215 -0.4712 -0.00026706 -0.0616 -3.4913E-05 566.777668967961 570.784934358902 40.79 0.48021 40.79 40.571 41.051 0 179 41 6 0 0 0 0.020914 2 18794 47.603 15.668 1 0.61417 0.4871 0 4438500 2841200 1597300 30621 623 11641 11958 47705;47706 47705 SEDQDLQGLK 10 1 0 Unmodified _SEDQDLQGLK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;B5MCB4;A0A0S2Z401;A0A0D9SFX7;D5L9I4;A0A0S2Z3U3;A0A075BPH5;A0A0D9SEX1;C9JH89;A0A0S2Z3V4 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.7774 2 566.777667 1131.54078 NaN NaN NaN 0.16682 9.4552E-05 NaN NaN NaN NaN 40.954 0.56017 40.954 40.711 41.271 0 0 0 0 0.044712 1 18322 48.157 17.084 1 NaN NaN 0 2065400 2065400 0 30622 623 11641 11958 47707 47707 SEDSSGAAGLSGLHR 15 0 1 Unmodified _SEDSSGAAGLSGLHR_ 0 0 0 Q86U86;E7EVG2;H0Y5B5;Q9NUX9 Q86U86 Q86U86 PBRM1 Protein polybromo-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.3489 2 722.344768 1442.67498 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.768 1 30.768 30.268 31.268 0 0 0 0 0.0071314 1 15133 51.013 40.49 1 30623 1883 11642 11959 47708 47708 SEEDNEIESEEEVQPK 16 1 0 Unmodified _SEEDNEIESEEEVQPK_ 0 0 0 P52701;A0A087WWJ1;Q1L838;C9J7Y7;Q3SWU9 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 949.9146 2 945.907989 1889.80143 NaN NaN NaN 0.094301 8.92E-05 NaN NaN NaN NaN 44.876 0.30893 44.876 44.729 45.038 0 0 0 0 3.1593E-18 1 24087 120.57 117.35 1 NaN NaN 0 8409700 0 8409700 30624 1601 11643 11960 47709 47709 SEEDNEIESEEEVQPK 16 1 0 Unmodified _SEEDNEIESEEEVQPK_ 0 0 0 P52701;A0A087WWJ1;Q1L838;C9J7Y7;Q3SWU9 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.91 2 945.907989 1889.80143 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.846 1 44.846 44.346 45.346 0 0 0 0 0.00075374 1 24120 58.132 52.29 1 30625 1601 11643 11960 47710 47710 SEEDNEIESEEEVQPK 16 1 0 Unmodified _SEEDNEIESEEEVQPK_ 0 0 0 P52701;A0A087WWJ1;Q1L838;C9J7Y7;Q3SWU9 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 950.4156 2 945.907989 1889.80143 64730.72 0.84433 0.00079866 -0.094206 -8.911E-05 0.75012 0.00070955 946.409312863786 950.416464881475 44.054 0.34559 44.054 43.883 44.228 0 69 31 4 0 0 0 2.0672E-08 2 23936 100.93 99.344 1 2.2586 2.3552 0 10050000 3715900 6334100 30626 1601 11643 11960 47711;47712 47711 SEEELLVIFNK 11 1 0 Unmodified _SEEELLVIFNK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.5948 2 660.855918 1319.69728 76531.5 0.9997 0.00066066 -0.25621 -0.00016932 0.7435 0.00049134 660.855615555838 664.86254741314 112.07 0.6182 112.07 111.84 112.46 -7.6294E-06 182 43 6 0 0 0 7.5478E-11 1 70757 133.57 133.57 1 0.81723 0.81288 0 26173000 13323000 12850000 30627 2079 11644 11961 47713 47713 SEEELLVIFNK 11 1 0 Unmodified _SEEELLVIFNK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.8561 2 660.855918 1319.69728 75919.7 0.776 0.00051282 -0.060053 -3.9686E-05 0.71594 0.00047314 660.855768651321 664.862823907781 111.46 0.55724 111.46 111.22 111.77 0 142 36 5 0 0 0 2.8015E-10 1 72060 133.57 133.57 1 0.79024 0.801 0 29431000 17994000 11437000 30628 2079 11644 11961 47714 47714 SEEELLVIFNK 11 1 0 Unmodified _SEEELLVIFNK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.8564 2 660.855918 1319.69728 74325.58 0.88909 0.00058756 0.1184 7.8245E-05 1.0075 0.00066581 660.855525212985 664.863316688054 123.36 0.58707 123.36 123.11 123.69 0 146 23 9 0 0 0 5.0291E-06 3 73810 122.28 122.28 1 0.9667 0.78461 0 26798000 13305000 13493000 30629 2079 11644 11961 47715;47716;47717 47716 SEEELLVIFNK 11 1 0 Unmodified _SEEELLVIFNK_ 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 660.8558 2 660.855918 1319.69728 74068.04 0.86406 0.00057102 -0.084282 -5.5698E-05 0.77978 0.00051532 660.855181910654 664.863223632944 123.16 0.61866 123.16 122.92 123.54 0 149 27 8 0 0 0 9.0493E-14 2 72696 150.17 150.17 1 1.1274 0.90863 0 23059000 9701400 13358000 30630 2079 11644 11961 47718;47719 47719 SEEELLVIFNKK 12 2 0 Unmodified _SEEELLVIFNKK_ 0 0 1 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.9056 2 724.903399 1447.79225 73267.84 0.66743 0.00048382 -0.57917 -0.00041985 0.088256 6.3977E-05 724.903613792115 732.916732903286 107.57 0.503 107.57 107.37 107.87 0 100 29 5 0 0 0 0.0072614 2 60702 53.756 42.592 1 2.3639 2.0509 0 2658500 690060 1968400 30631 2079 11645 11962 47720;47721 47720 SEEGNVSAPGPESK 14 1 0 Unmodified _SEEGNVSAPGPESK_ 0 0 0 Q03164;E9PR05;B3W6H7;H7BYJ6;Q8N6B4;Q1HA41 Q03164 Q03164 KMT2A;TET1-MLL;MLL/CALM fusion;MLL-MAML2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.3205 2 694.320428 1386.6263 74050.91 0.47973 0.00033309 -0.11212 -7.7848E-05 0.36761 0.00025524 694.320233273465 698.327538812496 22.518 0.43617 22.518 22.35 22.786 0 129 27 7 0 0 0 2.3421E-21 2 8555 146.5 146.5 1 0.87829 0.93312 0 16088000 8519500 7568500 30632 1680 11646 11963 47722;47723 47723 SEEGNVSAPGPESK 14 1 0 Unmodified _SEEGNVSAPGPESK_ 0 0 0 Q03164;E9PR05;B3W6H7;H7BYJ6;Q8N6B4;Q1HA41 Q03164 Q03164 KMT2A;TET1-MLL;MLL/CALM fusion;MLL-MAML2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.3204 2 694.320428 1386.6263 72536.63 0.90257 0.00062667 -0.49799 -0.00034576 0.40458 0.00028091 694.320138544966 698.327226033765 22.36 0.56635 22.36 22.177 22.744 -1.9073E-06 84 24 6 0 0 0 1.907E-21 2 8356 147.26 147.26 1 0.85487 0.87078 0 30749000 16808000 13941000 30633 1680 11646 11963 47724;47725 47725 SEEGNVSAPGPESK 14 1 0 Unmodified _SEEGNVSAPGPESK_ 0 0 0 Q03164;E9PR05;B3W6H7;H7BYJ6;Q8N6B4;Q1HA41 Q03164 Q03164 KMT2A;TET1-MLL;MLL/CALM fusion;MLL-MAML2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.3207 2 694.320428 1386.6263 NaN NaN NaN 0.27633 0.00019186 NaN NaN NaN NaN 25.146 0.3205 25.146 24.983 25.304 0 0 0 0 0.00027099 1 9063 82.362 77.911 1 NaN NaN 0 2053800 2053800 0 30634 1680 11646 11963 47726 47726 SEEGNVSAPGPESK 14 1 0 Unmodified _SEEGNVSAPGPESK_ 0 0 0 Q03164;E9PR05;B3W6H7;H7BYJ6;Q8N6B4;Q1HA41 Q03164 Q03164 KMT2A;TET1-MLL;MLL/CALM fusion;MLL-MAML2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.3281 2 694.320428 1386.6263 73398.35 0.56314 0.000391 0.16414 0.00011396 0.72728 0.00050496 694.320500561928 698.32754429321 25.243 0.46691 25.243 25.019 25.486 -1.9073E-06 138 25 8 0 0 0 0.00010451 1 8589 84.479 84.479 1 2.102 1.6664 0 3991000 1292500 2698500 30635 1680 11646 11963 47727 47727 SEEGPGWTILR 11 0 1 Unmodified _SEEGPGWTILR_ 0 0 0 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.8218 2 622.817127 1243.6197 77234.72 0.78446 0.00048857 -0.23685 -0.00014751 0.54761 0.00034106 622.817148717132 627.821320499374 86.775 0.867 86.775 86.463 87.33 0 257 66 7 0 0 0 7.8857E-10 1 52260 125.56 85.518 1 0.7329 0.74972 0 35010000 19558000 15452000 30636 2134 11647 11964 47728 47728 SEEGPGWTILR 11 0 1 Unmodified _SEEGPGWTILR_ 0 0 0 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.3597 2 622.817127 1243.6197 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.121 1 87.121 86.621 87.621 0 0 0 0 0.039138 1 52591 44.863 20.088 1 30637 2134 11647 11964 47729 47729 SEEGPGWTILR 11 0 1 Unmodified _SEEGPGWTILR_ 0 0 0 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8184 2 622.817127 1243.6197 76833.52 0.8464 0.00052715 -0.64576 -0.00040219 0.20065 0.00012497 622.817027301261 627.821068629121 85.685 0.64383 85.685 85.457 86.101 0 248 47 9 0 0 0 5.7131E-08 3 52832 116.3 84.37 1 0.79824 0.9207 0 71821000 38377000 33445000 30638 2134 11647 11964 47730;47731;47732 47731 SEEGPGWTILR 11 0 1 Unmodified _SEEGPGWTILR_ 0 0 0 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.8215 2 622.817127 1243.6197 76397.63 0.62501 0.00038927 0.061579 3.8353E-05 0.68659 0.00042762 622.81722308948 627.821246927334 99.219 0.94241 99.219 98.789 99.731 0 258 53 8 0 0 0 0.00029949 2 55974 88.495 53.2 1 1.2463 1.038 0 22356000 9790000 12566000 30639 2134 11647 11964 47733;47734 47733 SEEGPGWTILR 11 0 1 Unmodified _SEEGPGWTILR_ 0 0 0 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.8216 2 622.817127 1243.6197 75349.62 0.55493 0.00034562 -0.1122 -6.988E-05 0.44273 0.00027574 622.817271124719 627.821222791769 99.028 0.72614 99.028 98.771 99.497 0 260 43 8 0 0 0 0.00081909 2 55055 72.243 49.503 1 1.2928 1.1107 0 21553000 9469500 12083000 30640 2134 11647 11964 47735;47736 47735 SEEPAGQILSHLSSELK 17 1 0 Unmodified _SEEPAGQILSHLSSELK_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.6547 3 608.982779 1823.92651 78115.18 0.65094 0.00039641 0.011259 6.8568E-06 0.6622 0.00040327 608.982712118223 611.654065514644 106.07 0.70299 106.07 105.75 106.45 7.6294E-06 157 49 5 0 0 0 0.022574 2 65683 20.65 20.65 1 1.4517 1.4574 0 18635000 8325000 10310000 30641 619 11648 11965 47737;47738 47737 SEEPAGQILSHLSSELK 17 1 0 Unmodified _SEEPAGQILSHLSSELK_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.6551 3 608.982779 1823.92651 77614.96 0.66123 0.00040268 0.00131 7.9775E-07 0.66254 0.00040348 608.982718453561 611.988466454891 105.22 0.62416 105.22 104.84 105.46 0 230 47 7 0 0 0 9.0886E-05 2 66638 48.883 41.292 1 1.3054 1.4087 0 22625000 11340000 11285000 30642 619 11648 11965 47739;47740 47739 SEEQPMDLENR 11 0 1 Oxidation (M) _SEEQPM(ox)DLENR_ SEEQPM(1)DLENR SEEQPM(96.34)DLENR 0 1 0 Q96T23;H0YER1;H0YCN2;Q05DG0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.2978 2 682.293356 1362.57216 73577.83 0.3996 0.00027264 0.2084 0.00014219 0.608 0.00041483 682.293243598313 687.297816692646 23.561 0.37678 23.561 23.373 23.75 0 51 17 5 0 0 0 5.7305E-05 2 9428 96.342 90.307 1 0.60312 0.61261 0 9839200 6222500 3616700 30643 1991 11649 11966 47741;47742 47742 1821 SEEQPMDLENR 11 0 1 Oxidation (M) _SEEQPM(ox)DLENR_ SEEQPM(1)DLENR SEEQPM(94.31)DLENR 0 1 0 Q96T23;H0YER1;H0YCN2;Q05DG0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.2972 2 682.293356 1362.57216 75399.02 0.31138 0.00021245 -0.0064279 -4.3857E-06 0.30495 0.00020807 682.293490653363 687.297334422243 23.308 0.33459 23.308 23.179 23.514 0 55 15 6 0 0 0 8.0049E-05 2 9229 94.309 91.37 1 0.53416 0.534 0 9051600 5287000 3764600 30644 1991 11649 11966 47743;47744 47744 1821 SEETNTEIVECILK 14 1 0 Unmodified _SEETNTEIVECILK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.907 2 832.90601 1663.79747 65483.82 0.51825 0.00043165 0.23417 0.00019505 0.75242 0.0006267 832.906236865539 836.913384654108 102.56 1.0356 102.56 102.01 103.05 0 465 86 8 0 0 0 1.6085E-14 2 63060 132.76 132.76 1 1.6898 1.9105 0 104490000 37996000 66497000 30645 1569 11650 11967 47745;47746 47746 SEETNTEIVECILK 14 1 0 Unmodified _SEETNTEIVECILK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.4145 2 832.90601 1663.79747 65674.69 0.52534 0.00043756 0.15673 0.00013054 0.68207 0.0005681 832.906163607243 836.91333507108 101.86 1.1209 101.86 101.15 102.27 0 414 87 8 0 0 0 1.2641E-152 3 64057 268.77 268.77 1 1.6347 1.8662 0 154890000 57473000 97418000 30646 1569 11650 11967 47747;47748;47749 47747 SEETNTEIVECILK 14 1 0 Unmodified _SEETNTEIVECILK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 836.9124 2 832.90601 1663.79747 66356.53 0.73353 0.00061096 -0.44973 -0.00037458 0.2838 0.00023638 832.905799648237 836.912966158801 114.99 1.0689 114.99 114.57 115.64 0 310 50 12 0 0 0 1.0475E-06 2 67161 109.6 109.6 1 3.4719 3.0197 0 145170000 30246000 114920000 30647 1569 11650 11967 47750;47751 47750 SEETNTEIVECILK 14 1 0 Unmodified _SEETNTEIVECILK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.9067 2 832.90601 1663.79747 66389.78 0.76357 0.00063598 -0.51779 -0.00043127 0.24578 0.00020471 832.905694209075 836.912919451832 114.88 1.1488 114.88 114.6 115.74 7.6294E-06 278 53 11 0 0 0 2.2957E-38 2 66216 174.4 174.4 1 3.6313 3.1059 0 113920000 24823000 89095000 30648 1569 11650 11967 47752;47753 47753 SEFEQNLSEK 10 1 0 Unmodified _SEFEQNLSEK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.7808 2 605.78295 1209.55135 79084.73 0.7868 0.00047663 -0.15187 -9.2E-05 0.63493 0.00038463 605.782762243883 609.789773816592 35.569 0.56533 35.569 35.304 35.869 0 239 52 8 0 0 0 1.6945E-09 3 17785 130.75 130.75 1 0.97658 1.1068 0 97626000 45556000 52070000 30649 1774;1029;1128 11651 11968 47754;47755;47756 47755 SEFEQNLSEK 10 1 0 Unmodified _SEFEQNLSEK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.7894 2 605.78295 1209.55135 79331.23 0.74665 0.00045231 -0.39799 -0.00024109 0.34867 0.00021122 605.782639465273 609.789611081323 34.665 0.67281 34.665 34.447 35.12 0 240 58 6 0 0 0 7.8981E-12 2 17568 141.2 130.49 1 0.92712 1.0465 0 64990000 34862000 30128000 30650 1774;1029;1128 11651 11968 47757;47758 47758 SEFEQNLSEK 10 1 0 Unmodified _SEFEQNLSEK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.7837 2 605.78295 1209.55135 78291.66 0.33769 0.00020457 0.36414 0.00022059 0.70183 0.00042516 605.78309253351 609.790097431794 40.846 0.49024 40.846 40.614 41.104 0 194 41 6 0 0 0 0.0091807 2 18818 55.064 55.064 1 2.1452 1.7224 0 7996300 2254100 5742200 30651 1774;1029;1128 11651 11968 47759;47760 47760 SEFEQNLSEK 10 1 0 Unmodified _SEFEQNLSEK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.783 2 605.78295 1209.55135 77757.4 0.24104 0.00014602 0.23437 0.00014198 0.47541 0.000288 605.783104781037 609.790068388604 41.048 0.5127 41.048 40.792 41.304 0 188 42 7 0 0 0 0.0029784 2 18418 66.621 66.621 1 2.02 1.6523 0 8365300 2683000 5682400 30652 1774;1029;1128 11651 11968 47761;47762 47762 SEFLSTAPR 9 0 1 Unmodified _SEFLSTAPR_ 0 0 0 B4DYU9;A0A024R411;Q13416 B4DYU9 B4DYU9 ORC2L;ORC2 Origin recognition complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.2652 2 504.261456 1006.50836 88068.47 0.25874 0.00013047 -0.36322 -0.00018316 -0.10447 -5.2682E-05 504.260987176416 509.26542407284 55.477 0.52515 55.477 55.195 55.72 0 96 27 6 0 0 0 0.034216 1 27215 44.349 25.567 1 1.544 1.3612 0 1883400 680520 1202900 30653 146 11652 11969 47763 47763 SEFNFSSK 8 1 0 Unmodified _SEFNFSSK_ 0 0 0 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2193 2 473.219257 944.423961 90071.8 0.39625 0.00018751 -0.077113 -3.6491E-05 0.31914 0.00015102 473.219186783386 477.226173811518 42.847 0.37184 42.847 42.639 43.011 0 91 30 4 0 0 0 0.020265 1 22813 58.596 50.256 1 0.77125 0.78327 0 13647000 6911700 6735700 30654 360 11653 11970 47764 47764 SEGALELADVSNELPGLK 18 1 0 Unmodified _SEGALELADVSNELPGLK_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 925.9885 2 921.478188 1840.94182 63397.52 0.99831 0.00091992 1.3213 0.0012176 2.3197 0.0021375 921.981447746706 925.987294763897 128.13 1.0379 128.13 127.51 128.55 0 170 41 7 0 0 0 5.5136E-12 1 77279 135.58 98.736 1 0.83645 0.68046 0 30202000 15620000 14582000 30655 1694 11654 11971 47765 47765 SEGALELADVSNELPGLK 18 1 0 Unmodified _SEGALELADVSNELPGLK_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 925.4866 2 921.478188 1840.94182 63717.65 0.62459 0.00057554 0.64134 0.00059099 1.2659 0.0011665 921.979791378322 925.987845920179 127.97 1.1149 127.97 127.54 128.65 0 151 46 7 0 0 0 0.00022595 1 76264 67.234 47.494 1 0.86002 0.71955 0 44943000 24508000 20435000 30656 1694 11654 11971 47766 47766 SEGEGEAASADDGSLNTSGAGPK 23 1 0 Unmodified _SEGEGEAASADDGSLNTSGAGPK_ 0 0 0 M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;M0R2I2;J3KQS6;A0A024R7L2;Q9NWV8 M0QXG9 M0QXG9 BABAM1;HSPC142 BRISC and BRCA1-A complex member 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1053.9594 2 1053.95653 2105.89851 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.652 1 33.652 33.152 34.152 0 0 0 0 0.0014492 1 16910 45.864 40.88 1 30657 230 11655 11972 47767 47767 SEGEGEAASADDGSLNTSGAGPK 23 1 0 Unmodified _SEGEGEAASADDGSLNTSGAGPK_ 0 0 0 M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;M0R2I2;J3KQS6;A0A024R7L2;Q9NWV8 M0QXG9 M0QXG9 BABAM1;HSPC142 BRISC and BRCA1-A complex member 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1057.9651 2 1053.95653 2105.89851 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.663 1 33.663 33.163 34.163 3.8147E-06 0 0 0 1.2591E-05 1 16917 62.377 57.486 1 30658 230 11655 11972 47768 47768 SEGFDTYR 8 0 1 Unmodified _SEGFDTYR_ 0 0 0 Q6FI35;Q6FHF5;P12004;B4DUA2;Q7Z6A3;Q7Z6A2;Q7Z6A1 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.7141 2 487.714339 973.414125 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.019 1 32.019 31.519 32.519 0 0 0 0 0.04777 1 15915 55.37 24.081 1 30659 1473 11656 11973 47769 47769 SEGFDTYR 8 0 1 Unmodified _SEGFDTYR_ 0 0 0 Q6FI35;Q6FHF5;P12004;B4DUA2;Q7Z6A3;Q7Z6A2;Q7Z6A1 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.7182 2 487.714339 973.414125 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.099 1 32.099 31.599 32.599 0 0 0 0 0.018605 1 15954 68.383 46.612 1 30660 1473 11656 11973 47770 47770 SEGGEDYTGATVIEPLK 17 1 0 Unmodified _SEGGEDYTGATVIEPLK_ 0 0 0 M0QZR8;Q59FA0;A0A024R4F4;M0R2B7;P28340;M0QZB4 M0QZR8 M0QZR8 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.4277 2 883.428164 1764.84177 NaN NaN NaN -0.63351 -0.00055966 NaN NaN NaN NaN 84.505 0.24532 84.505 84.37 84.615 0 0 0 0 9.1183E-19 1 50609 122.39 106.5 1 NaN NaN 0 5242400 5242400 0 30661 155 11657 11974 47771 47771 SEGGEDYTGATVIEPLK 17 1 0 Unmodified _SEGGEDYTGATVIEPLK_ 0 0 0 M0QZR8;Q59FA0;A0A024R4F4;M0R2B7;P28340;M0QZB4 M0QZR8 M0QZR8 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.4372 2 883.428164 1764.84177 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.375 1 84.375 83.875 84.875 0 0 0 0 0.004261 1 50571 52.071 42.118 1 30662 155 11657 11974 47772 47772 SEGGEDYTGATVIEPLK 17 1 0 Unmodified _SEGGEDYTGATVIEPLK_ 0 0 0 M0QZR8;Q59FA0;A0A024R4F4;M0R2B7;P28340;M0QZB4 M0QZR8 M0QZR8 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.9316 2 883.428164 1764.84177 65922.52 0.75095 0.00066341 -0.017567 -1.5519E-05 0.73339 0.00064789 883.427451408209 887.937320623016 83.57 0.42065 83.57 83.415 83.836 0 91 32 5 0 0 0 6.5652E-05 3 51201 73.881 64.393 1 0.8872 0.92961 0 10742000 4978500 5763900 30663 155 11657 11974 47773;47774;47775 47774 SEGQGIWALLGR 12 0 1 Unmodified _SEGQGIWALLGR_ 0 0 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.8508 2 643.846219 1285.67788 77738.02 0.82907 0.00053379 0.29628 0.00019076 1.1254 0.00072455 643.846400853248 648.850544158245 127.98 0.50487 127.98 127.82 128.32 0 95 21 6 0 0 0 0.0010133 2 76395 62.463 62.463 1 1.5681 1.2863 0 8806900 2792000 6015000 30664 590 11658 11975 47776;47777 47777 SEGSEYEEIPK 11 1 0 Unmodified _SEGSEYEEIPK_ 0 0 0 P48634;B4DLY2 P48634 P48634 PRRC2A Protein PRRC2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.2957 2 634.288065 1266.56158 78605.44 0.37402 0.00023724 0.1725 0.00010941 0.54652 0.00034665 634.288726703878 638.295043955486 50.669 0.4677 50.669 50.419 50.887 3.8147E-06 93 33 4 0 0 0 0.032791 1 24954 37.476 25.986 1 2.5394 2.2254 0 1027100 280870 746230 30665 1576 11659 11976 47778 47778 SEGVVAVLLTK 11 1 0 Unmodified _SEGVVAVLLTK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.3377 2 558.337164 1114.65977 83730.53 0.68669 0.00038341 -0.77899 -0.00043494 -0.092293 -5.1531E-05 558.336994373725 562.343294193062 111.13 1.2393 111.13 110.21 111.45 0 137 63 6 0 0 0 0.061204 1 63355 33.158 33.158 1 1.7157 1.3539 0 3225000 1389300 1835700 30666 587 11660 11977 47779 47779 SEHGPISFFPESGQPECLK 19 1 0 Unmodified _SEHGPISFFPESGQPECLK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.0023 3 716.001845 2144.9837 70531.47 1.308 0.00093655 -0.26119 -0.00018701 1.0468 0.00074954 716.335849752533 719.007787098007 90.916 0.7111 90.916 90.603 91.314 0 225 58 6 0 0 0 8.2801E-05 2 54934 44.816 44.816 1 0.47204 0.49253 0 29869000 16457000 13412000 30667 1275 11661 11978 47780;47781 47780 SEHGPISFFPESGQPECLK 19 1 0 Unmodified _SEHGPISFFPESGQPECLK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.3383 3 716.001845 2144.9837 72756.27 0.75937 0.00054371 -0.9063 -0.00064891 -0.14693 -0.0001052 716.000905771548 719.006452124648 89.637 0.64738 89.637 89.294 89.942 0 207 53 6 0 0 0 2.3336E-06 2 55241 76.713 76.713 1 0.4453 0.47045 0 35525000 25101000 10424000 30668 1275 11661 11978 47782;47783 47782 SEHGPISFFPESGQPECLK 19 1 0 Unmodified _SEHGPISFFPESGQPECLK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 719.0063 3 716.001845 2144.9837 NaN NaN NaN -0.73273 -0.00052463 NaN NaN NaN NaN 103.25 0.50891 103.25 103.05 103.56 0 0 0 0 0.0095049 1 58697 32.156 27.254 1 NaN NaN 0 4152400 0 4152400 30669 1275 11661 11978 47784 47784 SEHGPISFFPESGQPECLK 19 1 0 Unmodified _SEHGPISFFPESGQPECLK_ 0 0 0 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 716.3363 3 716.001845 2144.9837 71217.74 0.46754 0.00033476 -0.17121 -0.00012259 0.29633 0.00021217 716.335905552946 718.672913624266 102.97 0.5892 102.97 102.73 103.32 0 236 39 9 0 0 0 0.0021682 2 57605 29.603 29.603 1 0.72176 0.58751 0 7248300 4927300 2321100 30670 1275 11661 11978 47785;47786 47786 SEHPGLSIGDTAK 13 1 0 Unmodified _SEHPGLSIGDTAK_ 0 0 0 Q5U071;P26583;D6R9A6 Q5U071 Q5U071 HMGB2 High mobility group protein B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.3322 2 656.330598 1310.64664 74633.34 0.58316 0.00038275 0.22579 0.00014819 0.80895 0.00053094 656.330625474178 660.337953380627 34.469 0.49506 34.469 34.149 34.644 0 188 40 7 0 0 0 0.0025655 1 17109 53.237 42.651 1 0.19081 0.215 0 75189000 65533000 9656200 30671 1521 11662 11979 47787 47787 SEHPGLSIGDTAK 13 1 0 Unmodified _SEHPGLSIGDTAK_ 0 0 0 Q5U071;P26583;D6R9A6 Q5U071 Q5U071 HMGB2 High mobility group protein B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 437.8894 3 437.889491 1310.64664 92347.79 -0.14595 -6.3911E-05 0.040065 1.7544E-05 -0.10589 -4.6367E-05 437.889527789248 440.89524487407 34.478 0.46091 34.478 34.16 34.621 0 137 37 6 0 0 0 0.021359 1 17216 15.35 13.655 1 0.1534 0.1509 0 23783000 19123000 4659800 30672 1521 11662 11979 47788 47788 SEHPGLSIGDTAK 13 1 0 Unmodified _SEHPGLSIGDTAK_ 0 0 0 Q5U071;P26583;D6R9A6 Q5U071 Q5U071 HMGB2 High mobility group protein B2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.8893 3 437.889491 1310.64664 NaN NaN NaN 0.2678 0.00011727 NaN NaN NaN NaN 33.329 0.41187 33.329 33.128 33.54 0 0 0 0 0.0032538 1 16604 38.178 32.675 1 NaN NaN 0 33536000 33536000 0 30673 1521 11662 11979 47789 47789 SEHPGLSIGDTAK 13 1 0 Unmodified _SEHPGLSIGDTAK_ 0 0 0 Q5U071;P26583;D6R9A6 Q5U071 Q5U071 HMGB2 High mobility group protein B2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.3313 2 656.330598 1310.64664 NaN NaN NaN 0.40182 0.00026372 NaN NaN NaN NaN 33.338 0.44814 33.338 33.107 33.555 0 0 0 0 1.1591E-37 1 16611 158.08 122.14 1 NaN NaN 0 109230000 109230000 0 30674 1521 11662 11979 47790 47790 SEHPGLSIGDTAK 13 1 0 Unmodified _SEHPGLSIGDTAK_ 0 0 0 Q5U071;P26583;D6R9A6 Q5U071 Q5U071 HMGB2 High mobility group protein B2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.3311 2 656.330598 1310.64664 78795.55 0.57108 0.00037482 0.22899 0.00015029 0.80007 0.00052511 656.33053296144 660.338294762211 38.867 0.70057 38.867 38.604 39.304 0 282 57 8 0 0 0 7.6128E-06 1 17695 103.08 79.711 1 0.12335 0.098253 0 19678000 17084000 2593600 30675 1521 11662 11979 47791 47791 SEHPGLSIGDTAK 13 1 0 Unmodified _SEHPGLSIGDTAK_ 0 0 0 Q5U071;P26583;D6R9A6 Q5U071 Q5U071 HMGB2 High mobility group protein B2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.8319 2 656.330598 1310.64664 75866 0.36054 0.00023664 0.39854 0.00026157 0.75908 0.00049821 656.330629292112 660.33884403333 38.828 0.89973 38.828 38.284 39.184 0 262 69 8 0 0 0 0.00011966 1 17100 76.843 60.979 1 0.13289 0.10676 0 17283000 15217000 2066500 30676 1521 11662 11979 47792 47792 SEHPGLSIGDTAK 13 1 0 Unmodified _SEHPGLSIGDTAK_ 0 0 0 Q5U071;P26583;D6R9A6 Q5U071 Q5U071 HMGB2 High mobility group protein B2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 437.8893 3 437.889491 1310.64664 NaN NaN NaN 0.15318 6.7077E-05 NaN NaN NaN NaN 38.806 0.55698 38.806 38.573 39.13 -3.8147E-06 0 0 0 0.039706 1 17146 20.23 15.135 1 NaN NaN 0 4842200 4842200 0 30677 1521 11662 11979 47793 47793 SEIDLFNIR 9 0 1 Unmodified _SEIDLFNIR_ 0 0 0 V9HWE0;P08758;D6RBE9;D6RBL5 V9HWE0 V9HWE0 HEL-S-7;ANXA5 Annexin;Annexin A5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.7988 2 553.795663 1105.57677 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.7 1 105.7 105.2 106.2 0 0 0 0 0.05463 1 65515 45.081 20.159 1 30678 1459 11663 11980 47794 47794 SEIEYYAMLAK 11 1 0 Oxidation (M) _SEIEYYAM(ox)LAK_ SEIEYYAM(1)LAK SEIEYYAM(86.14)LAK 0 1 0 E5RI99;A0A024R9D3;P62888 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.328 2 667.320854 1332.62715 75308.02 0.63625 0.00042458 0.53981 0.00036022 1.1761 0.00078481 667.321550469337 671.328101010709 80.36 1.2948 80.36 79.729 81.024 0 391 104 6 0 0 0 0.00016502 1 48576 86.136 76.355 1 1.132 1.2972 0 164800000 83039000 81757000 30679 276 11664 11981 47795 47795 211 SEIEYYAMLAK 11 1 0 Oxidation (M) _SEIEYYAM(ox)LAK_ SEIEYYAM(1)LAK SEIEYYAM(88.14)LAK 0 1 0 E5RI99;A0A024R9D3;P62888 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.3212 2 667.320854 1332.62715 75270.78 0.61988 0.00041366 -0.087629 -5.8477E-05 0.53225 0.00035518 667.320810450098 671.327932727488 93.635 0.82017 93.635 93.441 94.261 0 261 53 9 0 0 0 0.00014912 2 52295 88.136 75.609 1 0.57001 0.44759 0 17007000 10899000 6108200 30680 276 11664 11981 47796;47797 47796 211 SEIEYYAMLAK 11 1 0 Oxidation (M) _SEIEYYAM(ox)LAK_ SEIEYYAM(1)LAK SEIEYYAM(93.65)LAK 0 1 0 E5RI99;A0A024R9D3;P62888 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.321 2 667.320854 1332.62715 74699.68 0.44235 0.00029519 0.17535 0.00011702 0.6177 0.0004122 667.321184848239 671.327974572819 93.215 0.51008 93.215 92.929 93.439 7.6294E-06 148 28 7 0 0 0 8.7437E-05 1 51244 93.649 81.122 1 0.57129 0.46691 0 12665000 7921100 4744300 30681 276 11664 11981 47798 47798 211 SEIEYYAMLAK 11 1 0 Oxidation (M) _SEIEYYAM(ox)LAK_ SEIEYYAM(1)LAK SEIEYYAM(73.98)LAK 0 1 0 E5RI99;A0A024R9D3;P62888 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.3279 2 667.320854 1332.62715 NaN NaN NaN -0.19429 -0.00012965 NaN NaN NaN NaN 93.595 0.61121 93.595 93.389 94 0 0 0 0 0.00077907 1 51492 73.985 58.323 1 NaN NaN 0 5415400 0 5415400 30682 276 11664 11981 47799 47799 211 SEIEYYAMLAK 11 1 0 Unmodified _SEIEYYAMLAK_ 0 0 0 E5RI99;A0A024R9D3;P62888 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.3239 2 659.323396 1316.63224 76921.31 0.7785 0.00051329 -0.051475 -3.3939E-05 0.72703 0.00047935 659.323259442475 663.330075344126 107.55 0.48227 107.55 107.37 107.86 0 109 27 5 0 0 0 0.033349 1 61578 37.191 37.191 1 0.80736 0.64026 0 4614100 2283300 2330800 30683 276 11664 11982 47800 47800 SEIEYYAMLAK 11 1 0 Unmodified _SEIEYYAMLAK_ 0 0 0 E5RI99;A0A024R9D3;P62888 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.3236 2 659.323396 1316.63224 76468.73 0.63412 0.00041809 0.0089778 5.9193E-06 0.64309 0.00042401 659.323315363062 663.330256026982 107.46 0.5827 107.46 107.22 107.8 0 151 38 5 0 0 0 0.0071695 1 60632 53.089 48.929 1 0.88188 0.7146 0 4385400 2378600 2006800 30684 276 11664 11982 47801 47801 SEIIPETNQIYENDNK 16 1 0 Unmodified _SEIIPETNQIYENDNK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 958.4657 2 953.955077 1905.8956 63191.74 0.68371 0.00065223 0.35105 0.00033488 1.0348 0.00098711 953.955070984677 957.961828236065 76.376 0.42908 76.376 76.153 76.582 0 156 34 6 0 0 0 0.00014413 3 44906 75.819 75.819 1 1.0392 1.052 0 18264000 9901900 8362500 30685 1795 11665 11983 47802;47803;47804 47803 SEIIPETNQIYENDNK 16 1 0 Unmodified _SEIIPETNQIYENDNK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 958.462 2 953.955077 1905.8956 63763.04 0.43882 0.00041862 0.65489 0.00062474 1.0937 0.0010434 953.95516442634 958.464312735313 75.538 0.43723 75.538 75.255 75.692 0 170 39 6 0 0 0 0.00015189 2 45396 64.55 56.446 1 1.0661 1.1325 0 20545000 9260300 11284000 30686 1795 11665 11983 47805;47806 47805 SEIIPETNQIYENDNK 16 1 0 Unmodified _SEIIPETNQIYENDNK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 957.9625 2 953.955077 1905.8956 62721.32 0.24596 0.00023463 0.40323 0.00038466 0.64918 0.00061929 954.457282554752 957.962298481631 87.473 0.51452 87.473 87.23 87.745 -7.6294E-06 162 30 7 0 0 0 0.0068391 2 48033 35.204 32.946 1 1.9995 1.593 0 9787700 3027800 6759900 30687 1795 11665 11983 47807;47808 47807 SEIIPETNQIYENDNK 16 1 0 Unmodified _SEIIPETNQIYENDNK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 958.4645 2 953.955077 1905.8956 62783.94 0.29337 0.00027986 0.43373 0.00041376 0.7271 0.00069362 954.457382218532 957.962301307868 87.618 0.54218 87.618 87.341 87.883 0 165 31 7 0 0 0 0.0026325 1 47292 40.066 40.066 1 2.0822 1.698 0 7754400 2694600 5059800 30688 1795 11665 11983 47809 47809 SEIIPMFSNLASDEQDSVR 19 0 1 Oxidation (M) _SEIIPM(ox)FSNLASDEQDSVR_ SEIIPM(1)FSNLASDEQDSVR SEIIPM(60.4)FSNLASDEQDSVR 0 1 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;C9J9C1 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1077.5082 2 1077.50461 2152.99466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.14 1 107.14 106.64 107.64 7.6294E-06 0 0 0 0.00010978 1 66678 60.401 52.49 1 30689 723 11666 11984 47810 47810 559 SEISELR 7 0 1 Unmodified _SEISELR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;Q13092;CON__Q04695;Q04695;F5GWP8;Q14666 CON__P02533;CON__Q04695 CON__P02533 KRT14;K14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.2227 2 417.2218 832.429047 NaN NaN NaN 0.17647 7.3628E-05 NaN NaN NaN NaN 32.711 0.40516 32.711 32.478 32.883 0 0 0 0 0.0045621 1 16249 114.72 24.818 1 NaN NaN 0 21498000 21498000 0 + 30690 1150;1168 11667 11985 47811 47811 SEITELR 7 0 1 Unmodified _SEITELR_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 424.2294 2 424.229625 846.444697 NaN NaN NaN 0.37572 0.00015939 NaN NaN NaN NaN 36.123 1.1337 36.123 35.735 36.869 0 0 0 0 0.032752 1 18348 77.741 38.768 1 NaN NaN 0 118640000 118640000 0 + 30691 1161 11668 11986 47812 47812 SEITELRR 8 0 2 Unmodified _SEITELRR_ 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.2801 2 502.28018 1002.54581 NaN NaN NaN -0.44954 -0.00022579 NaN NaN NaN NaN 25 0.67743 25 24.813 25.49 0 0 0 0 2.3362E-08 1 10636 134.81 54.348 1 NaN NaN 0 583040000 583040000 0 + 30692 1161 11669 11987 47813 47813 SEITELRR 8 0 2 Unmodified _SEITELRR_ 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 335.1891 3 335.189212 1002.54581 NaN NaN NaN -0.34814 -0.00011669 NaN NaN NaN NaN 25.024 0.37069 25.024 24.88 25.251 0 0 0 0 4.9041E-06 1 10642 116.73 61.049 1 NaN NaN 0 86295000 86295000 0 + 30693 1161 11669 11987 47814 47814 SEITELRR 8 0 2 Unmodified _SEITELRR_ 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.2806 2 502.28018 1002.54581 NaN NaN NaN -0.40993 -0.0002059 NaN NaN NaN NaN 28.157 0.82108 28.157 27.949 28.77 0 0 0 0 0.02095 1 11105 65.038 17.971 1 NaN NaN 0 109420000 109420000 0 + 30694 1161 11669 11987 47815 47815 SEITELRR 8 0 2 Unmodified _SEITELRR_ 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 335.1891 3 335.189212 1002.54581 NaN NaN NaN -0.067224 -2.2533E-05 NaN NaN NaN NaN 28.178 0.59907 28.178 27.949 28.548 0 0 0 0 0.032517 1 11144 42.109 25.906 1 NaN NaN 0 16161000 16161000 0 + 30695 1161 11669 11987 47816 47816 SEITELRR 8 0 2 Unmodified _SEITELRR_ 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 502.2804 2 502.28018 1002.54581 NaN NaN NaN -0.29645 -0.0001489 NaN NaN NaN NaN 28.204 1.0786 28.204 27.975 29.053 0 0 0 0 0.014533 2 10594 70.69 26.071 1 NaN NaN 0 74258000 74258000 0 + 30696 1161 11669 11987 47817;47818 47818 SEIVPLFTSLASDEQDSVR 19 0 1 Unmodified _SEIVPLFTSLASDEQDSVR_ 0 0 0 A8K8B0;P30154;B7Z1G3 A8K8B0 A8K8B0 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1052.0283 2 1047.02349 2092.03243 62918.83 0.56574 0.00059234 1.1007 0.0011525 1.6664 0.0017448 1047.02530365682 1052.5309765163 133.35 0.41562 133.35 133.1 133.52 0 55 18 6 0 0 0 0.0006178 1 81147 37.55 37.55 1 1.1712 1.0158 0 2104300 846640 1257600 30697 774 11670 11988 47819 47819 SELEDFELDK 10 1 0 Unmodified _SELEDFELDK_ 0 0 0 B7ZMF2;Q9NVI1;H3BP78;F8W7R3;B3KNW8 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.7933 2 612.785158 1223.55576 NaN NaN NaN 0.47272 0.00028968 NaN NaN NaN NaN 78.279 0.31359 78.279 78.157 78.47 0 0 0 0 0.027002 1 47429 52.79 31.888 1 NaN NaN 0 3476900 0 3476900 30698 1116 11671 11989 47820 47820 SELHLLDFQGK 11 1 0 Unmodified _SELHLLDFQGK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.2339 3 429.562827 1285.66665 91172.98 0.24504 0.00010526 0.22894 9.8344E-05 0.47398 0.0002036 429.562911800708 432.234287776335 82.857 0.67834 82.857 82.518 83.197 0 261 56 6 0 0 0 0.015158 1 49359 25.914 25.914 1 0.99825 1.1151 0 62926000 33514000 29412000 30699 2132 11672 11990 47821 47821 SELHLLDFQGK 11 1 0 Unmodified _SELHLLDFQGK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.8411 2 643.840602 1285.66665 76454.48 0.99324 0.00063949 -0.33567 -0.00021612 0.65756 0.00042337 643.840536508787 647.847481365925 82.832 0.89474 82.832 82.372 83.267 0 275 75 7 0 0 0 0.00037499 1 49432 83.438 83.438 1 0.95817 1.0801 0 75964000 37288000 38676000 30700 2132 11672 11990 47822 47822 SELHLLDFQGK 11 1 0 Unmodified _SELHLLDFQGK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 429.5628 3 429.562827 1285.66665 91406.78 0.049233 2.1149E-05 -0.15726 -6.7554E-05 -0.10803 -4.6405E-05 429.562733489121 432.234024506559 81.327 0.62325 81.327 80.99 81.613 0 284 52 7 0 0 0 0.00061495 2 49589 59.418 59.418 1 0.96712 1.0721 0 47398000 26607000 20791000 30701 2132 11672 11990 47823;47824 47824 SELHLLDFQGK 11 1 0 Unmodified _SELHLLDFQGK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 432.2344 3 429.562827 1285.66665 91582.55 -0.1283 -5.5112E-05 0.2685 0.00011534 0.1402 6.0224E-05 429.562896247863 432.234276697693 93.932 0.58553 93.932 93.628 94.214 0 207 39 7 0 0 0 0.018688 1 52441 27.862 25.153 1 1.0143 0.80317 0 4941000 2443200 2497800 30702 2132 11672 11990 47825 47825 SELHLLDFQGK 11 1 0 Unmodified _SELHLLDFQGK_ 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 429.5626 3 429.562827 1285.66665 90827.55 -0.23757 -0.00010205 0.11382 4.8891E-05 -0.12376 -5.3161E-05 429.562848120444 432.234190315689 93.667 0.61821 93.667 93.35 93.968 7.6294E-06 205 41 7 0 0 0 0.015341 2 51472 30.004 27.137 1 0.97515 0.79925 0 5025800 2830400 2195400 30703 2132 11672 11990 47826;47827 47826 SELISCIENGNYAK 14 1 0 Unmodified _SELISCIENGNYAK_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4DZ41;B7Z926;Q9Y4Q3;B4DZC2;Q5CZ83 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094;DKFZp686F0325 Bromodomain-containing protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.8892 2 799.379962 1596.74537 NaN NaN NaN -0.28171 -0.0002252 NaN NaN NaN NaN 89.577 0.37828 89.577 89.371 89.75 0 0 0 0 0.022095 1 49560 43.897 29.739 1 NaN NaN 0 1240200 0 1240200 30704 162 11673 11991 47828 47828 SELLLAEEPGFLEGEDGEDTAK 22 1 0 Unmodified _SELLLAEEPGFLEGEDGEDTAK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1175.5544 2 1175.05264 2348.09073 54536.46 0.031287 3.6764E-05 0.11959 0.00014052 0.15087 0.00017728 1175.55327334801 1179.56101471495 114.58 0.55034 114.58 114.33 114.88 7.6294E-06 299 38 10 0 0 0 5.8215E-08 2 72623 67.275 67.275 1 0.93151 1.0308 0 57881000 26476000 31405000 30705 809 11674 11992 47829;47830 47830 SELLLAEEPGFLEGEDGEDTAK 22 1 0 Unmodified _SELLLAEEPGFLEGEDGEDTAK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1179.5624 2 1175.05264 2348.09073 55665.75 0.088826 0.00010437 -0.054772 -6.436E-05 0.034054 4.0015E-05 1175.55374772033 1179.56117570029 114.12 0.55926 114.12 113.86 114.42 0 259 40 8 0 0 0 3.9585E-08 1 74036 70.622 67.755 1 0.97356 1.0975 0 61241000 30053000 31188000 30706 809 11674 11992 47831 47831 SELLLAEEPGFLEGEDGEDTAK 22 1 0 Unmodified _SELLLAEEPGFLEGEDGEDTAK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1179.5612 2 1175.05264 2348.09073 54910.99 0.25334 0.00029769 0.21461 0.00025218 0.46795 0.00054987 1175.55355313257 1179.5615439465 125.77 1.1284 125.77 125.44 126.57 0 336 45 11 0 0 0 3.2294E-37 3 75448 144.68 141.97 1 1.2109 1.007 0 46917000 21058000 25860000 30707 809 11674 11992 47832;47833;47834 47834 SELLLAEEPGFLEGEDGEDTAK 22 1 0 Unmodified _SELLLAEEPGFLEGEDGEDTAK_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1179.0601 2 1175.05264 2348.09073 55222.34 0.28768 0.00033804 -0.096795 -0.00011374 0.19089 0.0002243 1175.55356444488 1179.56109920338 125.65 1.1091 125.65 125.33 126.44 0 301 50 11 0 0 0 7.5092E-08 1 74432 64.244 64.244 1 1.2483 1.039 0 39280000 17841000 21439000 30708 809 11674 11992 47835 47835 SELLVEQGR 9 0 1 Unmodified _SELLVEQGR_ 0 0 0 Q92878;E7EN38;Q32P42;E7ESD9;A8K3I2 Q92878 Q92878 RAD50 DNA repair protein RAD50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.7846 2 515.780013 1029.54547 86433.82 0.54882 0.00028307 0.26744 0.00013794 0.81626 0.00042101 515.780228258895 520.783999598427 42.257 0.51321 42.257 42.01 42.523 -3.8147E-06 132 38 5 0 0 0 0.0049382 1 22443 67.993 48.289 1 0.64257 0.66684 0 22571000 14310000 8260700 30709 1953 11675 11993 47836 47836 SELLVEQGR 9 0 1 Unmodified _SELLVEQGR_ 0 0 0 Q92878;E7EN38;Q32P42;E7ESD9;A8K3I2 Q92878 Q92878 RAD50 DNA repair protein RAD50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.7844 2 515.780013 1029.54547 86697.88 0.45054 0.00023238 -0.18145 -9.3587E-05 0.26909 0.00013879 515.779812594612 520.78400296321 40.823 0.47499 40.823 40.545 41.02 -3.8147E-06 81 33 6 0 0 0 0.0034791 1 21884 71.692 48.65 1 0.68681 0.75263 0 39973000 23262000 16712000 30710 1953 11675 11993 47837 47837 SELLVPGSQLILGPHESK 18 1 0 Unmodified _SELLVPGSQLILGPHESK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.0255 3 635.354436 1903.04148 77008.41 0.68195 0.00043328 -0.06976 -4.4322E-05 0.61219 0.00038896 635.688772217464 638.025814796925 106.41 0.72095 106.41 106.04 106.76 7.6294E-06 281 51 8 0 0 0 1.2782E-05 2 65918 46.621 46.621 1 0.31505 0.33533 0 31807000 23483000 8324000 30711 1965 11676 11994 47838;47839 47839 SELLVPGSQLILGPHESK 18 1 0 Unmodified _SELLVPGSQLILGPHESK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3601 3 635.354436 1903.04148 76348.16 0.61413 0.00039019 0.025836 1.6415E-05 0.63997 0.00040661 635.354390856965 638.360036789961 105.51 0.63005 105.51 105.19 105.82 0 241 44 8 0 0 0 1.0878E-05 2 66914 49.606 49.606 1 0.31807 0.34063 0 37073000 27568000 9504800 30712 1965 11676 11994 47840;47841 47841 SELLVPGSQLILGPHESK 18 1 0 Unmodified _SELLVPGSQLILGPHESK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 953.0322 2 952.528015 1903.04148 63387.72 0.5398 0.00051418 0.19007 0.00018105 0.72988 0.00069523 953.029808342091 956.536010705091 105.54 0.4869 105.54 105.23 105.72 0 86 33 5 0 0 0 5.3609E-05 1 66900 56.951 56.951 1 0.30789 0.31416 0 12040000 9673400 2367000 30713 1965 11676 11994 47842 47842 SELLVPGSQLILGPHESK 18 1 0 Unmodified _SELLVPGSQLILGPHESK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.6888 3 635.354436 1903.04148 75275.66 0.43882 0.0002788 0.18271 0.00011609 0.62153 0.00039489 635.354525645982 638.025935763171 117.25 0.4404 117.25 117.05 117.49 0 131 19 9 0 0 0 1.3012E-05 2 69006 52.612 52.612 1 0.613 0.47934 0 16302000 8893200 7409100 30714 1965 11676 11994 47843;47844 47843 SELLVPGSQLILGPHESK 18 1 0 Unmodified _SELLVPGSQLILGPHESK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 952.5279 2 952.528015 1903.04148 63168.34 0.33047 0.00031479 0.61253 0.00058345 0.943 0.00089824 953.030733836807 956.534006852897 117.22 0.48462 117.22 117.05 117.53 0 71 21 6 0 0 0 0.013278 1 69030 26.541 26.541 1 0.67196 0.53289 0 4613100 2672700 1940400 30715 1965 11676 11994 47845 47845 SELLVPGSQLILGPHESK 18 1 0 Unmodified _SELLVPGSQLILGPHESK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.0261 3 635.354436 1903.04148 74889.4 0.67544 0.00042915 -0.036467 -2.3169E-05 0.63898 0.00040598 635.688780307807 638.025787061931 117 0.4426 117 116.76 117.21 0 118 19 8 0 0 0 0.0001784 2 67859 32.181 32.181 1 0.59569 0.49215 0 11618000 7668500 3949600 30716 1965 11676 11994 47846;47847 47846 SELLVPGSQLILGPHESK 18 1 0 Unmodified _SELLVPGSQLILGPHESK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 953.0292 2 952.528015 1903.04148 63429.51 0.44709 0.00042586 -0.081941 -7.8051E-05 0.36515 0.00034781 952.527938242511 957.036224424114 117.01 0.40296 117.01 116.76 117.17 0 70 17 6 0 0 0 0.00090436 1 67920 39.394 39.394 1 0.65973 0.51876 0 3280400 1835600 1444700 30717 1965 11676 11994 47848 47848 SELSQDAEPAGSQETK 16 1 0 Unmodified _SELSQDAEPAGSQETK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.8826 2 838.88412 1675.75369 68401.08 0.47151 0.00039555 -0.4974 -0.00041726 -0.025885 -2.1715E-05 838.883424827309 842.890674236135 25.772 0.28946 25.772 25.594 25.883 0 64 15 6 0 0 0 1.7471E-05 2 11269 86.313 77.583 1 1.0772 1.0749 0 7850600 3962300 3888200 30718 2008 11677 11995 47849;47850 47850 SELSQDAEPAGSQETK 16 1 0 Unmodified _SELSQDAEPAGSQETK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.3851 2 838.88412 1675.75369 68874.31 1.1872 0.00099589 -0.55405 -0.00046478 0.63311 0.00053111 839.385511696541 842.890048692259 25.465 0.2609 25.465 25.328 25.589 0 34 10 6 0 0 0 4.5328E-12 2 11101 116.24 99.984 1 0.90812 0.91814 0 8760900 4716200 4044700 30719 2008 11677 11995 47851;47852 47852 SELVANNVTLPAGEQR 16 0 1 Unmodified _SELVANNVTLPAGEQR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 854.4492 2 849.444483 1696.87441 66441.95 0.49983 0.00042458 -0.040256 -3.4195E-05 0.45958 0.00039038 849.444539358241 854.448466575577 74.465 0.6194 74.465 74.155 74.774 0 320 50 8 0 0 0 5.6829E-45 3 43545 219.74 210.55 1 1.017 1.1404 0 91404000 45462000 45942000 30720 334;1562 11678 11996 47853;47854;47855 47854 SELVANNVTLPAGEQR 16 0 1 Unmodified _SELVANNVTLPAGEQR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 854.4494 2 849.444483 1696.87441 66548.86 0.55068 0.00046777 0.12051 0.00010236 0.67119 0.00057014 849.444681634584 854.448542506275 73.455 0.69904 73.455 73.09 73.789 0 341 58 8 0 0 0 4.9473E-81 2 44036 255.54 255.54 1 1.0588 1.2055 0 109700000 53774000 55922000 30721 334;1562 11678 11996 47856;47857 47857 SELVANNVTLPAGEQR 16 0 1 Unmodified _SELVANNVTLPAGEQR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 854.4484 2 849.444483 1696.87441 66563.8 0.63217 0.00053699 0.21033 0.00017866 0.84249 0.00071565 849.445199010761 854.448447492776 84.98 0.73083 84.98 84.658 85.389 0 334 50 10 0 0 0 0.0033281 2 46278 49.423 49.423 1 1.1194 0.93985 0 26227000 12498000 13729000 30722 334;1562 11678 11996 47858;47859 47858 SELVANNVTLPAGEQR 16 0 1 Unmodified _SELVANNVTLPAGEQR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 849.4459 2 849.444483 1696.87441 66276.89 0.7155 0.00060777 0.03933 3.3409E-05 0.75483 0.00064118 849.44501777278 854.448321795587 85.154 0.74167 85.154 84.812 85.554 0 339 49 9 0 0 0 0.00021409 1 45591 59.227 59.227 1 1.1497 1.0007 0 24816000 11731000 13085000 30723 334;1562 11678 11996 47860 47860 SELYFLIAR 9 0 1 Unmodified _SELYFLIAR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.3154 2 556.310949 1110.60735 81053.32 0.73227 0.00040737 -0.25634 -0.0001426 0.47593 0.00026477 556.310741381163 561.31499006615 109.46 1.019 109.46 108.95 109.97 0 335 72 7 0 0 0 0.005317 2 68223 67.032 59.092 1 0.77627 0.84682 0 51708000 30536000 21172000 30724 1942 11679 11997 47861;47862 47862 SELYFLIAR 9 0 1 Unmodified _SELYFLIAR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.3114 2 556.310949 1110.60735 80321.07 0.59381 0.00033034 -0.20037 -0.00011147 0.39344 0.00021887 556.310810103002 561.314952769485 108.64 0.86331 108.64 108.23 109.09 0 327 61 8 0 0 0 0.0020795 2 69311 77.058 58.275 1 0.7737 0.8957 0 57169000 32465000 24703000 30725 1942 11679 11997 47863;47864 47864 SELYFLIAR 9 0 1 Unmodified _SELYFLIAR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.3155 2 556.310949 1110.60735 81086.23 0.44792 0.00024918 0.28626 0.00015925 0.73418 0.00040843 556.310987056203 561.315119910825 120.52 0.81004 120.52 120.2 121.01 0 172 37 9 0 0 0 0.0066845 2 71402 63.565 53.654 1 1.4547 1.2158 0 23966000 9814900 14151000 30726 1942 11679 11997 47865;47866 47865 SELYFLIAR 9 0 1 Unmodified _SELYFLIAR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.8127 2 556.310949 1110.60735 81330.12 0.8324 0.00046307 -0.045195 -2.5142E-05 0.7872 0.00043793 556.310864594476 561.314928918509 120.23 0.86345 120.23 119.94 120.8 7.6294E-06 228 43 9 0 0 0 0.0020795 2 70342 77.058 66.266 1 1.4244 1.2197 0 20789000 9029800 11759000 30727 1942 11679 11997 47867;47868 47868 SEMEVQDAELK 11 1 0 Oxidation (M) _SEM(ox)EVQDAELK_ SEM(1)EVQDAELK SEM(89.05)EVQDAELK 0 1 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8026 2 647.7952 1293.57585 NaN NaN NaN -0.70264 -0.00045517 NaN NaN NaN NaN 30.981 0.41454 30.981 30.771 31.185 0 0 0 0 0.00020185 1 15165 89.047 73.166 1 NaN NaN 0 6740100 0 6740100 30728 328 11680 11998 47869 47869 249 SEMEVQDAELK 11 1 0 Oxidation (M) _SEM(ox)EVQDAELK_ SEM(1)EVQDAELK SEM(96.14)EVQDAELK 0 1 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8022 2 647.7952 1293.57585 NaN NaN NaN -0.38856 -0.0002517 NaN NaN NaN NaN 30.471 0.46304 30.471 30.113 30.576 -1.9073E-06 0 0 0 2.2934E-05 1 14846 96.143 77.703 1 NaN NaN 0 7251000 0 7251000 30729 328 11680 11998 47870 47870 249 SEMTPEELQK 10 1 0 Oxidation (M) _SEM(ox)TPEELQK_ SEM(1)TPEELQK SEM(107.69)TPEELQK 0 1 0 P62316;K7ERG4 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.287 2 604.279186 1206.54382 NaN NaN NaN 4.0565 0.0024513 NaN NaN NaN NaN 24.634 0.43735 24.634 24.393 24.831 1.9073E-06 0 0 0 4.116E-08 1 10264 107.69 78.607 1 NaN NaN 0 20347000 0 20347000 30730 1645 11681 11999 47871 47871 1426 SEMTPEELQK 10 1 0 Oxidation (M) _SEM(ox)TPEELQK_ SEM(1)TPEELQK SEM(93.27)TPEELQK 0 1 0 P62316;K7ERG4 P62316 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.279 2 604.279186 1206.54382 71876.04 0.37026 0.00022374 1.7714 0.0010704 2.1417 0.0012942 604.279281767262 608.287692741099 24.395 0.39508 24.395 24.156 24.552 0 72 17 5 0 0 0 0.00010877 2 10187 93.267 75.902 1 1.6191 1.7923 0 45698000 16298000 29400000 30731 1645 11681 11999 47872;47873 47873 1426 SENEEFVEVGR 11 0 1 Unmodified _SENEEFVEVGR_ 0 0 0 K7EM13;Q68DQ4;B2R5T5;P10644 K7EM13 K7EM13 PRKAR1A;DKFZp779L0468 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.8049 2 647.799131 1293.58371 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.159 1 53.159 52.659 53.659 0 0 0 0 0.0061262 1 29689 63.734 47.401 1 30732 835 11682 12000 47874 47874 SENEPIENEAAK 12 1 0 Unmodified _SENEPIENEAAK_ 0 0 0 A0A024R325;Q96I99;Q3ZCW5;E9PDQ8;B7Z2D5 A0A024R325 A0A024R325 SUCLG2 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.8176 2 665.809696 1329.60484 NaN NaN NaN 0.14291 9.5149E-05 NaN NaN NaN NaN 23.66 0.28432 23.66 23.484 23.769 0 0 0 0 1.9527E-08 1 9525 112.71 65.513 1 NaN NaN 0 4517400 0 4517400 30733 126 11683 12001 47875 47875 SENEPIENEAAK 12 1 0 Unmodified _SENEPIENEAAK_ 0 0 0 A0A024R325;Q96I99;Q3ZCW5;E9PDQ8;B7Z2D5 A0A024R325 A0A024R325 SUCLG2 Succinyl-CoA ligase subunit beta;Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.817 2 665.809696 1329.60484 74930.07 0.39446 0.00026264 -0.01533 -1.0207E-05 0.37913 0.00025243 665.809682432268 669.816907817055 23.412 0.25019 23.412 23.291 23.542 0 32 11 5 0 0 0 3.7095E-08 1 9278 117.02 117.02 1 1.9473 1.9668 0 8381500 2661900 5719600 30734 126 11683 12001 47876 47876 SENGLEFTSSGSANTETTK 19 1 0 Unmodified _SENGLEFTSSGSANTETTK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 984.9514 2 980.442531 1958.87051 61917.41 0.66354 0.00065056 -0.0090589 -8.8817E-06 0.65448 0.00064168 980.943893778311 984.449673465921 49.829 0.96777 49.829 49.596 50.564 0 513 84 10 0 0 0 3.913E-64 3 27349 182.02 182.02 1 1.7655 2.0684 0 293390000 105300000 188090000 30735 639 11684 12002 47877;47878;47879 47878 SENGLEFTSSGSANTETTK 19 1 0 Unmodified _SENGLEFTSSGSANTETTK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.9429 2 980.442531 1958.87051 NaN NaN NaN 0.27631 0.0002709 NaN NaN NaN NaN 50.407 0.12019 50.407 50.32 50.44 0 0 0 0 7.0289E-13 1 27830 97.273 84.088 1 NaN NaN 0 6117400 6117400 0 30736 639 11684 12002 47880 47880 SENGLEFTSSGSANTETTK 19 1 0 Unmodified _SENGLEFTSSGSANTETTK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 984.4493 2 980.442531 1958.87051 61728.83 0.15296 0.00014996 0.30133 0.00029544 0.45429 0.0004454 980.944204838823 984.449942477014 49.006 1.1044 49.006 48.422 49.526 0 657 90 10 0 0 0 2.0455E-93 5 27703 211.75 211.75 1 1.654 1.9283 0 256560000 99221000 157340000 30737 639 11684 12002 47881;47882;47883;47884;47885 47883 SENVDVGKPALGK 13 2 0 Unmodified _SENVDVGKPALGK_ 0 0 1 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.3582 2 657.356616 1312.69868 NaN NaN NaN 0.43015 0.00028276 NaN NaN NaN NaN 31.671 0.16211 31.671 31.588 31.75 1.9073E-06 0 0 0 0.0017644 1 15718 90.685 70.899 1 NaN NaN 0 4263100 4263100 0 30738 1945 11685 12003 47886 47886 SENVDVGKPALGK 13 2 0 Unmodified _SENVDVGKPALGK_ 0 0 1 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 443.9161 3 438.573503 1312.69868 89191.83 -0.1435 -6.2936E-05 -0.32028 -0.00014047 -0.46378 -0.0002034 438.573405628913 443.916140879707 37.15 0.53973 37.15 36.915 37.454 0 192 43 6 0 0 0 0.0080071 1 16718 35.006 23.141 1 2.0884 1.785 0 12376000 3928700 8447400 30739 1945 11685 12003 47887 47887 SENVDVGKPALGK 13 2 0 Unmodified _SENVDVGKPALGK_ 0 0 1 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.9162 3 438.573503 1312.69868 89047.28 -0.10488 -4.5998E-05 -0.33835 -0.00014839 -0.44323 -0.00019439 438.573317808887 443.916121803818 37.215 0.66018 37.215 36.951 37.611 3.8147E-06 200 55 6 0 0 0 0.011441 1 16274 27.33 19.605 1 2.1065 1.7795 0 10577000 3580600 6996200 30740 1945 11685 12003 47888 47888 SEPHSPGIPEIFR 13 0 1 Unmodified _SEPHSPGIPEIFR_ 0 0 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.5885 3 489.252652 1464.73613 87364.41 0.26629 0.00013028 -0.085697 -4.1927E-05 0.18059 8.8355E-05 489.2528354981 492.588620538068 93.468 0.7068 93.468 93.17 93.877 7.6294E-06 181 47 6 0 0 0 0.02075 1 52162 18.413 18.413 1 1.7083 1.4397 0 4678800 1747900 2931000 30741 1924 11686 12004 47889 47889 SEPIPESNDGPVK 13 1 0 Unmodified _SEPIPESNDGPVK_ 0 0 0 B4DDM1;B3KQT9;B3KQT2;V9HVY3;P30101;B4DJ98 B4DDM1 B4DDM1 HEL-S-269;PDIA3 Protein disulfide-isomerase;Protein disulfide-isomerase A3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.842 2 684.835714 1367.65687 NaN NaN NaN -0.81678 -0.00055936 NaN NaN NaN NaN 40.462 0.21275 40.462 40.292 40.505 -3.8147E-06 0 0 0 0.0091343 1 21572 53.597 24.9 1 NaN NaN 0 7708600 0 7708600 30742 930 11687 12005 47890 47890 SEPSGEINIDSSGETVGSGER 21 0 1 Unmodified _SEPSGEINIDSSGETVGSGER_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1058.979 2 1053.97473 2105.9349 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.865 1 60.865 60.365 61.365 0 0 0 0 0.0015722 1 34749 53.403 40.636 1 30743 1565 11688 12006 47891 47891 SEPSGEINIDSSGETVGSGER 21 0 1 Unmodified _SEPSGEINIDSSGETVGSGER_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1053.975 2 1053.97473 2105.9349 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.063 1 61.063 60.563 61.563 3.8147E-06 0 0 0 0.020167 1 34894 39.143 33.484 1 30744 1565 11688 12006 47892 47892 SEPSGEINIDSSGETVGSGER 21 0 1 Unmodified _SEPSGEINIDSSGETVGSGER_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1058.9799 2 1053.97473 2105.9349 61342.21 0.50903 0.00053651 -0.63799 -0.00067243 -0.12896 -0.00013592 1053.97432474883 1058.97907187303 60.081 0.37395 60.081 59.882 60.256 -3.8147E-06 90 25 5 0 0 0 2.9821E-08 2 34996 74.789 65.256 1 0.83621 0.84429 0 10184000 4389100 5795000 30745 1565 11688 12006 47893;47894 47893 SEPSGEINIDSSGETVGSGER 21 0 1 Unmodified _SEPSGEINIDSSGETVGSGER_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1054.9797 2 1053.97473 2105.9349 60052.46 -0.082956 -8.7434E-05 0.52726 0.00055572 0.4443 0.00046828 1053.97483044716 1058.9794332966 70.958 0.61465 70.958 70.689 71.303 0 208 39 7 0 0 0 0.015796 1 37394 23.419 23.419 1 1.7404 1.4884 0 5887800 2544700 3343100 30746 1565 11688 12006 47895 47895 SEQDQAENEGEDSAVLMER 19 0 1 Oxidation (M) _SEQDQAENEGEDSAVLM(ox)ER_ SEQDQAENEGEDSAVLM(1)ER SEQDQAENEGEDSAVLM(60.55)ER 0 1 0 A0A024QYX7;B3KNZ4;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B4DVQ5;A1KYQ7;A0A024QYU9;Q99613;B5ME19 A0A024QYX7 A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1081.9528 2 1076.95039 2151.88623 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.469 1 45.469 44.969 45.969 0 0 0 0 0.0001082 1 24961 60.55 51.514 1 30747 6 11689 12007 47896 47896 6 SEQEDEVLLVSSSR 14 0 1 Unmodified _SEQEDEVLLVSSSR_ 0 0 0 B2RE29;A0A024RBG1;A0A024RBD0;Q9NZJ9 B2RE29 B2RE29 NUDT4 Diphosphoinositol polyphosphate phosphohydrolase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 794.3897 2 789.386299 1576.75804 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.629 1 72.629 72.129 73.129 0 0 0 0 0.021514 1 42550 44.299 34.068 1 30748 337 11690 12008 47897 47897 SEQEDEVLLVSSSR 14 0 1 Unmodified _SEQEDEVLLVSSSR_ 0 0 0 B2RE29;A0A024RBG1;A0A024RBD0;Q9NZJ9 B2RE29 B2RE29 NUDT4 Diphosphoinositol polyphosphate phosphohydrolase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.9225 2 789.386299 1576.75804 NaN NaN NaN -0.59806 -0.0004721 NaN NaN NaN NaN 71.512 0.067688 71.512 71.489 71.557 -7.6294E-06 0 0 0 0.046427 1 42882 39.219 31.149 1 NaN NaN 0 3685000 0 3685000 30749 337 11690 12008 47898 47898 SEQEDEVLLVSSSR 14 0 1 Unmodified _SEQEDEVLLVSSSR_ 0 0 0 B2RE29;A0A024RBG1;A0A024RBD0;Q9NZJ9 B2RE29 B2RE29 NUDT4 Diphosphoinositol polyphosphate phosphohydrolase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.3909 2 789.386299 1576.75804 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.479 1 71.479 70.979 71.979 0 0 0 0 0.0028903 1 42856 58.674 44.904 1 30750 337 11690 12008 47899 47899 SEQEFSFDTPADR 13 0 1 Unmodified _SEQEFSFDTPADR_ 0 0 0 B2RA91;F8VXG7;Q99590 B2RA91 B2RA91 SCAF11 Protein SCAF11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.836 2 764.83116 1527.64777 69591.09 0.44502 0.00034037 0.38866 0.00029726 0.83368 0.00063763 764.83256444697 769.835780115637 80.162 0.23194 80.162 80.043 80.275 7.6294E-06 42 13 6 0 0 0 0.023462 1 43330 35.006 34.23 1 1.261 1.0944 0 2155900 935770 1220100 30751 871 11691 12009 47900 47900 SEQEFSFDTPADR 13 0 1 Unmodified _SEQEFSFDTPADR_ 0 0 0 B2RA91;F8VXG7;Q99590 B2RA91 B2RA91 SCAF11 Protein SCAF11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 769.8356 2 764.83116 1527.64777 69821.8 0.68379 0.00052298 -0.1748 -0.0001337 0.50898 0.00038929 764.832037365537 770.335508875705 80.455 0.26741 80.455 80.306 80.573 0 40 16 4 0 0 0 0.014039 1 42664 37.613 36.625 1 1.0744 0.96881 0 2065100 1162500 902630 30752 871 11691 12009 47901 47901 SEQLEELFSQVGPVK 15 1 0 Unmodified _SEQLEELFSQVGPVK_ 0 0 0 A0A024R753;Q9NW13;C9JE21;C9JAA9;A0A0S2Z5E5 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.4467 2 845.438335 1688.86212 64951.83 0.82096 0.00069407 0.0095527 8.0762E-06 0.83051 0.00070214 845.438255958066 849.445343496898 112.68 0.60057 112.68 112.46 113.06 0 236 40 8 0 0 0 1.0077E-47 2 72856 184.55 184.55 1 0.9961 1.119 0 74299000 35495000 38804000 30753 214 11692 12010 47902;47903 47903 SEQLEELFSQVGPVK 15 1 0 Unmodified _SEQLEELFSQVGPVK_ 0 0 0 A0A024R753;Q9NW13;C9JE21;C9JAA9;A0A0S2Z5E5 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.4459 2 845.438335 1688.86212 66362.57 0.82406 0.00069669 -0.33884 -0.00028647 0.48522 0.00041023 845.43742963598 849.445460679491 124.64 0.86012 124.64 124.39 125.25 0 236 38 10 0 0 0 2.4742E-10 2 74675 118.87 118.87 1 1.3058 1.06 0 27120000 11423000 15697000 30754 214 11692 12010 47904;47905 47904 SEQLEELFSQVGPVK 15 1 0 Unmodified _SEQLEELFSQVGPVK_ 0 0 0 A0A024R753;Q9NW13;C9JE21;C9JAA9;A0A0S2Z5E5 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 849.4455 2 845.438335 1688.86212 66511.88 0.74656 0.00063117 -0.58948 -0.00049837 0.15708 0.0001328 845.437260235589 849.445240881257 124.49 0.95027 124.49 124.2 125.15 0 257 43 10 0 0 0 3.7133E-08 1 73657 111.94 111.94 1 1.3383 1.1014 0 28340000 12710000 15630000 30755 214 11692 12010 47906 47906 SEQPSLVIQK 10 1 0 Unmodified _SEQPSLVIQK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8169 2 564.816596 1127.61864 NaN NaN NaN 0.24422 0.00013794 NaN NaN NaN NaN 49.74 0.3467 49.74 49.535 49.882 0 0 0 0 0.003957 1 27368 88.819 58.634 1 NaN NaN 0 12432000 12432000 0 + 30756 1146 11693 12011 47907 47907 SEQPTLVTASK 11 1 0 Unmodified _SEQPTLVTASK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.8187 2 580.81151 1159.60847 80308.45 0.45201 0.00026253 0.35701 0.00020736 0.80902 0.00046989 580.812242765718 584.818561446259 34.689 0.96315 34.689 34.255 35.218 3.8147E-06 371 82 6 0 0 0 3.1396E-05 1 17260 100.48 85.326 1 1.0078 1.0842 0 38547000 18285000 20262000 30757 716 11694 12012 47908 47908 SEQPTLVTASK 11 1 0 Unmodified _SEQPTLVTASK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8185 2 580.81151 1159.60847 79816.72 0.61803 0.00035896 0.052559 3.0527E-05 0.67059 0.00038949 580.811543255838 584.818535581322 34.153 0.69486 34.153 33.714 34.409 0 221 51 6 0 0 0 0.00011828 2 17107 96.342 84.295 1 0.9652 1.0842 0 55769000 29543000 26227000 30758 716 11694 12012 47909;47910 47909 SEQPTLVTASK 11 1 0 Unmodified _SEQPTLVTASK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.8181 2 580.81151 1159.60847 80063.42 0.28908 0.0001679 0.23097 0.00013415 0.52005 0.00030205 580.811653799884 584.818661453926 39.473 0.69299 39.473 39.138 39.831 0 304 53 8 0 0 0 0.011605 1 17905 48.284 41.98 1 1.2901 1.0387 0 22038000 9636900 12401000 30759 716 11694 12012 47911 47911 SEQPTLVTASK 11 1 0 Unmodified _SEQPTLVTASK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.8117 2 580.81151 1159.60847 79269.57 0.21745 0.0001263 0.23275 0.00013518 0.4502 0.00026148 580.81160599833 584.818670088161 39.567 0.81166 39.567 39.172 39.984 -3.8147E-06 340 62 8 0 0 0 0.00052901 2 17576 74.464 61.937 1 1.2358 0.99181 0 18303000 8682000 9620700 30760 716 11694 12012 47912;47913 47913 SEQSVAQLEEEK 12 1 0 Unmodified _SEQSVAQLEEEK_ 0 0 0 Q7Z5D5;Q7RTQ9;Q7RTQ7;G5E9S8;G3V2E7;B5BU63;F8W6L3;B4DGB3;Q7RTQ8;Q7RTQ2;G3V3H3;Q7RTQ1;Q7RTQ0;Q7RTQ4;G3V5R9;Q7RTP8;E7EVH7;B4DS14;Q07866;G3V2P7 Q7Z5D5 Q7Z5D5 KNS2;KLC1 Kinesin light chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.8375 2 688.830628 1375.6467 NaN NaN NaN 0.93433 0.0006436 NaN NaN NaN NaN 39.142 0.37033 39.142 38.93 39.3 0 0 0 0 0.0067098 1 20226 59.84 38.392 1 NaN NaN 0 3072600 0 3072600 30761 972 11695 12013 47914 47914 SESDLEETEPVVIPR 15 0 1 Unmodified _SESDLEETEPVVIPR_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 855.427 2 850.422881 1698.83121 66088.25 0.70697 0.00060123 -0.061596 -5.2383E-05 0.64538 0.00054884 850.422852732195 855.426732356224 99.35 0.62122 99.35 99.043 99.664 0 155 34 5 0 0 0 1.3111E-05 1 56051 90.653 90.653 1 1.1422 0.98311 0 7471800 3369800 4102100 30762 1679 11696 12014 47915 47915 SESDLEETEPVVIPR 15 0 1 Unmodified _SESDLEETEPVVIPR_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 855.4276 2 850.422881 1698.83121 65846.21 0.61623 0.00052406 -0.037834 -3.2175E-05 0.5784 0.00049188 850.42283125403 855.426856594345 99.257 0.55965 99.257 98.968 99.528 0 148 34 5 0 0 0 0.00022369 2 55170 69.451 69.451 1 1.1464 0.95389 0 7278800 3700800 3578000 30763 1679 11696 12014 47916;47917 47916 SESFANYIDER 11 0 1 Unmodified _SESFANYIDER_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.7995 2 665.799131 1329.58371 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.879 1 73.879 73.379 74.379 0 0 0 0 0.011532 1 43333 57.348 32.426 1 30764 1581 11697 12015 47918 47918 SESFANYIDER 11 0 1 Unmodified _SESFANYIDER_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.8027 2 665.799131 1329.58371 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.897 1 73.897 73.397 74.397 7.6294E-06 0 0 0 0.00072269 1 43344 72.006 44.891 1 30765 1581 11697 12015 47919 47919 SESFANYIDER 11 0 1 Unmodified _SESFANYIDER_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3401 2 665.799131 1329.58371 NaN NaN NaN -0.013944 -9.284E-06 NaN NaN NaN NaN 72.715 0.47949 72.715 72.538 73.017 0 0 0 0 0.00050231 2 43614 90.108 81.888 1 NaN NaN 0 5286100 0 5286100 30766 1581 11697 12015 47920;47921 47921 SESHTDLTFSR 11 0 1 Unmodified _SESHTDLTFSR_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3039 2 640.299298 1278.58404 78015.05 0.76984 0.00049293 -0.3879 -0.00024837 0.38195 0.00024456 640.299104899779 645.80462441618 31.528 0.3317 31.528 31.43 31.762 0 60 30 5 0 0 0 0.0055485 1 15639 56.013 37.788 1 0.82113 0.82097 0 8888300 5291200 3597200 30767 655 11698 12016 47922 47922 SESHTDLTFSR 11 0 1 Unmodified _SESHTDLTFSR_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.2983 2 640.299298 1278.58404 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.443 1 31.443 30.943 31.943 -1.9073E-06 0 0 0 3.2333E-06 1 15512 98.048 66.627 1 30768 655 11698 12016 47923 47923 SESHTDLTFSR 11 0 1 Unmodified _SESHTDLTFSR_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3002 2 640.299298 1278.58404 NaN NaN NaN 0.021448 1.3733E-05 NaN NaN NaN NaN 30.753 0.43941 30.753 30.576 31.016 0 0 0 0 0.0015808 1 15105 82.261 54.248 1 NaN NaN 0 5884800 5884800 0 30769 655 11698 12016 47924 47924 SESQEEMLQVFNVETHTSK 19 1 0 Oxidation (M) _SESQEEM(ox)LQVFNVETHTSK_ SESQEEM(1)LQVFNVETHTSK SESQEEM(71.74)LQVFNVETHTSK 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.0104 3 747.010957 2238.01104 69966.2 0.509 0.00038023 -0.0078592 -5.8709E-06 0.50114 0.00037435 747.345504806521 749.682519369854 72.162 0.90967 72.162 71.754 72.664 0 378 69 10 0 0 0 2.8999E-06 2 42280 71.742 71.742 1 1.3058 1.4035 0 38986000 16969000 22017000 30770 897 11699 12017 47925;47926 47925 716 SESQEEMLQVFNVETHTSK 19 1 0 Oxidation (M) _SESQEEM(ox)LQVFNVETHTSK_ SESQEEM(1)LQVFNVETHTSK SESQEEM(80.97)LQVFNVETHTSK 0 1 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.0113 3 747.010957 2238.01104 70030.91 0.67988 0.00050788 -0.43146 -0.0003223 0.24843 0.00018558 747.010890093681 750.016477112807 70.783 0.83128 70.783 70.456 71.288 0 236 62 7 0 0 0 1.1634E-06 1 42259 80.975 80.975 1 1.1937 1.315 0 43159000 22851000 20308000 30771 897 11699 12017 47927 47927 716 SESSDFEVVPK 11 1 0 Unmodified _SESSDFEVVPK_ 0 0 0 E7EPN9;Q9Y520;B4DM27 E7EPN9 E7EPN9 PRRC2C Protein PRRC2C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.3011 2 612.29315 1222.57175 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.603 1 59.603 59.103 60.103 -3.8147E-06 0 0 0 0.0065898 1 33977 63.184 34.785 1 30772 1219 11700 12018 47928 47928 SESSTSAFSTPTR 13 0 1 Unmodified _SESSTSAFSTPTR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3163 2 679.315145 1356.61574 73416.22 1.112 0.00075541 -0.41878 -0.00028448 0.69324 0.00047093 679.314792941287 684.318994378587 33.412 0.81067 33.412 33.024 33.835 0 272 79 6 0 0 0 1.8389E-13 3 16494 130.09 130.09 1 0.8572 0.89786 0 39155000 21281000 17874000 30773 1942 11701 12019 47929;47930;47931 47930 SESSTSAFSTPTR 13 0 1 Unmodified _SESSTSAFSTPTR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3228 2 679.315145 1356.61574 73085.63 0.3598 0.00024442 0.033517 2.2769E-05 0.39331 0.00026718 679.315058724149 684.319544395865 32.967 0.73672 32.967 32.553 33.29 0 303 67 6 0 0 0 0.00012284 3 16590 89.548 70.277 1 0.85039 0.98744 0 59034000 29107000 29927000 30774 1942 11701 12019 47932;47933;47934 47934 SESSTSAFSTPTR 13 0 1 Unmodified _SESSTSAFSTPTR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.3195 2 679.315145 1356.61574 72832.53 0.52441 0.00035624 0.13444 9.133E-05 0.65886 0.00044757 679.315210828127 684.319340163852 38.454 0.80453 38.454 37.944 38.748 0 305 60 10 0 0 0 8.5065E-06 2 17396 101.95 79.214 1 1.4805 1.2549 0 32147000 12991000 19156000 30775 1942 11701 12019 47935;47936 47936 SESSTSAFSTPTR 13 0 1 Unmodified _SESSTSAFSTPTR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.3196 2 679.315145 1356.61574 72480.79 0.35871 0.00024368 0.23173 0.00015742 0.59044 0.0004011 679.315204979491 684.319394990784 38.614 0.67291 38.614 38.246 38.919 3.8147E-06 294 51 8 0 0 0 4.4689E-06 2 17000 107.06 84.315 1 1.585 1.3826 0 27762000 10999000 16763000 30776 1942 11701 12019 47937;47938 47938 SETAPAAPAAAPPAEK 16 1 0 Unmodified _SETAPAAPAAAPPAEK_ 0 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.8778 2 739.877913 1477.74127 70599.38 0.8175 0.00060485 -0.030163 -2.2317E-05 0.78734 0.00058253 739.8778498008 743.884964625676 36.222 0.46685 36.222 35.986 36.453 0 258 43 8 0 0 0 2.2185E-12 1 18224 120.87 17.902 1 1.2 1.3562 0 105400000 47146000 58253000 30777 1490 11702 12020 47939 47939 SETAPAAPAAAPPAEK 16 1 0 Unmodified _SETAPAAPAAAPPAEK_ 0 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.8782 2 739.877913 1477.74127 70721.84 0.90506 0.00066963 -0.11696 -8.6539E-05 0.7881 0.00058309 739.877893756439 743.884877248542 37.391 0.90709 37.391 37.075 37.982 0 483 75 11 0 0 0 3.3497E-12 1 18951 118.61 3.7389 1 0.81917 0.97642 0 682090000 361450000 320640000 30778 1490 11702 12020 47940 47940 SETAPAAPAAAPPAEK 16 1 0 Unmodified _SETAPAAPAAAPPAEK_ 0 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8785 2 739.877913 1477.74127 70788.53 1.6116 0.0011924 0.045704 3.3815E-05 1.6574 0.0012262 739.877923839671 743.884996618215 35.362 0.57188 35.362 35.163 35.735 0 263 52 8 0 0 0 5.9705E-13 2 17970 124.12 19.875 1 1.2205 1.367 0 81993000 39131000 42861000 30779 1490 11702 12020 47941;47942 47942 SETAPAAPAAAPPAEK 16 1 0 Unmodified _SETAPAAPAAAPPAEK_ 0 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8783 2 739.877913 1477.74127 70641.37 1.0534 0.00077941 -0.22952 -0.00016982 0.82391 0.00060959 739.877794591876 743.884810662353 36.493 0.71918 36.493 36.231 36.95 0 430 55 12 0 0 0 4.9771E-18 2 18649 135.6 3.3586 1 0.81651 0.96397 0 1029800000 573260000 456550000 30780 1490 11702 12020 47943;47944 47944 SETAPAAPAAAPPAEK 16 1 0 Unmodified _SETAPAAPAAAPPAEK_ 0 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.8856 2 739.877913 1477.74127 70994.74 0.56941 0.00042129 0.072586 5.3705E-05 0.64199 0.000475 739.877951374075 743.884983608003 41.528 0.59763 41.528 41.257 41.855 0 298 47 9 0 0 0 0.00015628 1 19238 74.46 7.9627 1 0.62104 0.49065 0 18089000 10900000 7189400 30781 1490 11702 12020 47945 47945 SETAPAAPAAAPPAEK 16 1 0 Unmodified _SETAPAAPAAAPPAEK_ 0 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.8782 2 739.877913 1477.74127 69393.48 0.3666 0.00027124 0.061276 4.5337E-05 0.42787 0.00031657 739.878028776378 743.885077121126 41.836 0.79154 41.836 41.477 42.268 -3.8147E-06 344 61 9 0 0 0 0.00029934 2 18798 55.258 11.757 1 0.62346 0.50058 0 14470000 8455500 6014400 30782 1490 11702 12020 47946;47947 47947 SETAPAAPAAAPPAEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAAPPAEK_ 1 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.3845 2 760.883195 1519.75184 69428.52 0.69749 0.00053071 0.17208 0.00013093 0.86957 0.00066164 760.883406631676 764.889804163682 37.066 0.40809 37.066 36.94 37.348 0 106 36 5 0 0 0 0.0036402 1 18761 42.031 6.3533 1 1.1956 1.214 0 13615000 6023000 7591800 30783 1490 11702 12021 47948 47948 SETAPAAPAAAPPAEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAAPPAEK_ 1 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.8912 2 760.883195 1519.75184 69593.77 0.47284 0.00035978 0.038077 2.8972E-05 0.51092 0.00038875 760.883267886164 764.890366000415 39.622 0.69167 39.622 39.286 39.978 0 341 57 8 0 0 0 0.0002584 2 20419 70.089 14.776 1 1.117 1.2633 0 85812000 39035000 46777000 30784 1490 11702 12021 47949;47950 47949 SETAPAAPAAAPPAEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAAPPAEK_ 1 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.8909 2 760.883195 1519.75184 68952.61 0.71834 0.00054657 0.10203 7.7633E-05 0.82037 0.00062421 760.883178009449 764.890191450789 55.954 1.3789 55.954 55.232 56.611 0 679 114 10 0 0 0 0.00024131 4 31760 75.819 17.249 1 1.1893 1.4079 0 438200000 200970000 237240000 30785 1490 11702 12021 47951;47952;47953;47954 47953 SETAPAAPAAAPPAEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAAPPAEK_ 1 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.8909 2 760.883195 1519.75184 NaN NaN NaN 0.62255 0.00047369 NaN NaN NaN NaN 37.628 0.21134 37.628 37.527 37.739 0 0 0 0 0.052703 1 19230 40.113 10.055 1 NaN NaN 0 2943600 0 2943600 30786 1490 11702 12021 47955 47955 SETAPAAPAAAPPAEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAAPPAEK_ 1 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.8914 2 760.883195 1519.75184 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.852 1 56.852 56.352 57.352 0 0 0 0 0.0023707 1 32054 48.004 8.7381 1 30787 1490 11702 12021 47956 47956 SETAPAAPAAAPPAEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAAPPAEK_ 1 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.8855 2 760.883195 1519.75184 69381.88 0.45702 0.00034774 0.16736 0.00012734 0.62438 0.00047508 760.883380266241 764.890485195981 38.682 0.64263 38.682 38.408 39.051 0 300 54 8 0 0 0 6.5314E-06 1 20247 87.719 14.637 1 1.2801 1.4353 0 78925000 33190000 45735000 30788 1490 11702 12021 47957 47957 SETAPAAPAAAPPAEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAAPPAEK_ 1 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.8906 2 760.883195 1519.75184 69194.07 0.46019 0.00035015 0.14043 0.00010685 0.60061 0.000457 760.883361135334 764.890313034996 55.199 1.2029 55.199 54.741 55.944 0 596 93 11 0 0 0 5.3915E-12 3 31453 118.87 16.978 1 1.1837 1.3954 0 659090000 291800000 367300000 30789 1490 11702 12021 47958;47959;47960 47958 SETAPAAPAAAPPAEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAAPPAEK_ 1 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 760.884 2 760.883195 1519.75184 70991.99 0.50009 0.00038051 0.56598 0.00043065 1.0661 0.00081116 760.883680038677 764.890828115296 45.66 0.73492 45.66 45.322 46.057 0 316 55 8 0 0 0 0.0012922 1 21814 48.044 12.45 1 0.65014 0.51483 0 10402000 6275100 4126600 30790 1490 11702 12021 47961 47961 SETAPAAPAAAPPAEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAAPPAEK_ 1 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.8901 2 760.883195 1519.75184 69188.23 0.58736 0.00044691 0.081947 6.2352E-05 0.66931 0.00050926 760.883235447939 764.890247732959 64.769 1.2193 64.769 64.269 65.488 0 665 89 11 0 0 0 0.00067748 2 33633 50.354 10.402 1 0.61346 0.53224 0 130370000 80309000 50060000 30791 1490 11702 12021 47962;47963 47963 SETAPAAPAAAPPAEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAAPPAEK_ 1 0 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 760.8829 2 760.883195 1519.75184 69384.98 0.49132 0.00037384 0.16573 0.0001261 0.65705 0.00049994 760.883334519126 764.890276513769 65.516 1.7335 65.516 64.625 66.358 0 756 133 10 0 0 0 0.0002561 3 33340 75.088 14.926 1 0.6252 0.53311 0 93733000 58543000 35189000 30792 1490 11702 12021 47964;47965;47966 47966 SETAPAAPAAPAPAEK 16 1 0 Unmodified _SETAPAAPAAPAPAEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.8857 2 739.877913 1477.74127 70599.38 0.8175 0.00060485 -0.030163 -2.2317E-05 0.78734 0.00058253 739.8778498008 743.884964625676 36.222 0.46685 36.222 35.986 36.453 0 258 43 8 0 0 0 2.4958E-06 1 18173 92.19 0 1 1.2 1.3562 0 105400000 47146000 58253000 30793 656 11703 12022 47967 47967 SETAPAAPAAPAPAEK 16 1 0 Unmodified _SETAPAAPAAPAPAEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3877 2 739.877913 1477.74127 70721.84 0.90506 0.00066963 -0.11696 -8.6539E-05 0.7881 0.00058309 739.877893756439 743.884877248542 37.391 0.90709 37.391 37.075 37.982 0 483 75 11 0 0 0 9.847E-09 1 18908 107.09 0 1 0.81917 0.97642 0 682090000 361450000 320640000 30794 656 11703 12022 47968 47968 SETAPAAPAAPAPAEK 16 1 0 Unmodified _SETAPAAPAAPAPAEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8774 2 739.877913 1477.74127 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.995 1 36.995 36.495 37.495 0 0 0 0 0.0010162 1 19140 68.44 0 1 30795 656 11703 12022 47969 47969 SETAPAAPAAPAPAEK 16 1 0 Unmodified _SETAPAAPAAPAPAEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.8788 2 739.877913 1477.74127 70917.57 0.64462 0.00047694 -0.11083 -8.2E-05 0.53379 0.00039494 739.878008127205 743.884858315831 43.033 1.1353 43.033 42.715 43.85 0 505 75 11 0 0 0 4.5328E-12 2 20244 116.24 0 1 0.62034 0.53798 0 127900000 77789000 50107000 30796 656 11703 12022 47970;47971 47971 SETAPAAPAAPAPAEK 16 1 0 Unmodified _SETAPAAPAAPAPAEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 743.8859 2 739.877913 1477.74127 69393.48 0.3666 0.00027124 0.061276 4.5337E-05 0.42787 0.00031657 739.878028776378 743.885077121126 41.836 0.79154 41.836 41.477 42.268 -3.8147E-06 344 61 9 0 0 0 0.018317 1 18823 29.544 0 1 0.62346 0.50058 0 14470000 8455500 6014400 30797 656 11703 12022 47972 47972 SETAPAAPAAPAPAEK 16 1 0 Unmodified _SETAPAAPAAPAPAEK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.8785 2 739.877913 1477.74127 70345.88 0.4475 0.00033109 -0.064671 -4.7849E-05 0.38282 0.00028324 739.878060378656 743.884874796473 43.249 1.223 43.249 42.925 44.148 0 485 78 11 0 0 0 1.7862E-24 2 19765 138.24 0 1 0.58891 0.50462 0 127980000 77692000 50288000 30798 656 11703 12022 47973;47974 47974 SETAPAAPAAPAPAEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAPAPAEK_ 1 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.8898 2 760.883195 1519.75184 68867.12 0.58442 0.00044468 0.11435 8.7007E-05 0.69877 0.00053168 760.88342301522 764.890313030545 56.551 1.2468 56.551 56.08 57.327 0 700 92 11 0 0 0 7.0156E-09 1 32536 110.31 6.8664 1 0.7822 0.92262 0 783480000 436370000 347120000 30799 656 11703 12023 47975 47975 SETAPAAPAAPAPAEKTPVK 20 2 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAPAPAEKTPVK_ 1 0 1 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 973.5133 2 973.515105 1945.01566 NaN NaN NaN -0.21555 -0.00020984 NaN NaN NaN NaN 57.353 0.19643 57.353 57.222 57.418 -3.8147E-06 0 0 0 0.00060011 1 32421 47.189 32.931 1 NaN NaN 0 1915500 1915500 0 30800 656 11704 12024 47976 47976 SETAPAAPAAPAPAEKTPVK 20 2 0 Acetyl (Protein N-term) _(ac)SETAPAAPAAPAPAEKTPVK_ 1 0 1 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.5308 2 973.515105 1945.01566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.28 1 57.28 56.78 57.78 0 0 0 0 0.00017428 1 32333 62.924 47.722 1 30801 656 11704 12024 47977 47977 SETAPAETATPAPVEK 16 1 0 Unmodified _SETAPAETATPAPVEK_ 0 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.8995 2 799.899042 1597.78353 68293.04 0.89244 0.00071386 -0.25768 -0.00020612 0.63476 0.00050775 799.898924869632 803.905820362913 39.163 0.89883 39.163 38.842 39.741 0 503 73 12 0 0 0 6.8215E-13 2 20076 123.95 123.95 1 0.61414 0.73587 0 955800000 602660000 353140000 30802 1489 11705 12025 47978;47979 47979 SETAPAETATPAPVEK 16 1 0 Unmodified _SETAPAETATPAPVEK_ 0 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.8981 2 799.899042 1597.78353 NaN NaN NaN -0.062427 -4.9935E-05 NaN NaN NaN NaN 39.78 0.2858 39.78 39.637 39.922 0 0 0 0 3.0112E-06 2 20619 83.617 63.314 1 NaN NaN 0 3538300 3538300 0 30803 1489 11705 12025 47980;47981 47980 SETAPAETATPAPVEK 16 1 0 Unmodified _SETAPAETATPAPVEK_ 0 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.9011 2 799.899042 1597.78353 68316.02 0.53001 0.00042395 0.011409 9.1262E-06 0.54141 0.00043308 799.89905332666 803.906145349742 38.128 0.90258 38.128 37.86 38.763 0 525 74 12 0 0 0 1.749E-17 2 19797 129.71 113.13 1 0.61034 0.72012 0 853580000 523510000 330070000 30804 1489 11705 12025 47982;47983 47983 SETAPAETATPAPVEK 16 1 0 Unmodified _SETAPAETATPAPVEK_ 0 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.9064 2 799.899042 1597.78353 67923.4 0.55873 0.00044693 -0.026699 -2.1356E-05 0.53203 0.00042557 799.899171535408 803.906031259895 45.087 1.3415 45.087 44.716 46.057 0 657 101 12 0 0 0 0.000279 3 21359 56.205 56.205 1 0.53292 0.46536 0 172500000 110920000 61576000 30805 1489 11705 12025 47984;47985;47986 47984 SETAPAETATPAPVEK 16 1 0 Unmodified _SETAPAETATPAPVEK_ 0 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 800.4003 2 799.899042 1597.78353 68466.21 0.78086 0.00062461 -0.3159 -0.00025268 0.46496 0.00037192 799.898929616644 803.905834806723 45.335 1.3518 45.335 44.968 46.32 0 611 92 12 0 0 0 0.00045028 4 21427 49.423 49.423 1 0.49353 0.42428 0 157950000 103290000 54666000 30806 1489 11705 12025 47987;47988;47989;47990 47989 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.4067 2 820.904325 1639.7941 67438.66 0.81227 0.00066679 0.19419 0.00015941 1.0065 0.0008262 820.904324530759 824.911393585827 42.498 0.92663 42.498 42.252 43.179 0 382 73 9 0 0 0 5.3781E-12 2 22561 118.88 109.23 1 0.56434 0.63815 0 146300000 94241000 52062000 30807 1489 11705 12026 47991;47992 47992 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.9124 2 820.904325 1639.7941 67221.14 0.66407 0.00054514 0.89172 0.00073201 1.5558 0.0012771 820.904798820295 825.414678449748 44.028 0.7473 44.028 43.747 44.494 0 265 67 6 0 0 0 7.6421E-10 4 23538 112.43 104.7 1 0.50187 0.54051 0 33573000 19292000 14280000 30808 1489 11705 12026 47993;47994;47995;47996 47994 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.4069 2 820.904325 1639.7941 67286.37 0.82773 0.00067948 0.24937 0.00020471 1.0771 0.00088419 820.904526118413 824.911472996294 44.773 1.1575 44.773 44.334 45.492 0 471 103 8 0 0 0 6.206E-06 4 23939 88.338 88.338 1 0.55155 0.62451 0 89390000 53409000 35982000 30809 1489 11705 12026 47997;47998;47999;48000 47997 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.9113 2 820.904325 1639.7941 66455.34 0.63509 0.00052135 0.26002 0.00021345 0.89511 0.0007348 820.904736544144 824.911544199605 61.16 1.5514 61.16 60.606 62.158 -3.8147E-06 925 121 12 0 0 0 1.7333E-34 4 35164 162.38 162.38 1 0.56801 0.68126 0 1018700000 676850000 341870000 30810 1489 11705 12026 48001;48002;48003;48004 48004 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.9047 2 820.904325 1639.7941 67010.23 0.77079 0.00063275 0.19034 0.00015625 0.96113 0.00078899 820.904288822606 824.911373733624 41.895 0.84576 41.895 41.567 42.413 0 397 74 8 0 0 0 0.000131 2 22403 81.278 81.278 1 0.54947 0.61612 0 113350000 75444000 37904000 30811 1489 11705 12026 48005;48006 48006 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.9058 2 820.904325 1639.7941 67286.35 1.1352 0.00093187 0.34724 0.00028505 1.4824 0.0012169 820.90453033756 824.910931434266 43.199 0.75476 43.199 42.88 43.635 3.8147E-06 248 61 6 0 0 0 1.0165E-08 2 23401 109.24 109.24 1 0.55259 0.61231 0 46849000 31381000 15469000 30812 1489 11705 12026 48007;48008 48008 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.9051 2 820.904325 1639.7941 66341.39 0.48722 0.00039996 0.18933 0.00015542 0.67656 0.00055539 820.904682526704 824.911520360229 60.4 1.3796 60.4 59.933 61.313 3.8147E-06 742 109 12 0 0 0 1.4254E-08 4 34972 107.85 102.75 1 0.54112 0.6387 0 963960000 621150000 342810000 30813 1489 11705 12026 48009;48010;48011;48012 48009 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.9053 2 820.904325 1639.7941 NaN NaN NaN -0.35432 -0.00029086 NaN NaN NaN NaN 43.933 0.87421 43.933 43.62 44.494 0 0 0 0 0.011674 2 23940 53.013 53.013 1 NaN NaN 0 59046000 59046000 0 30814 1489 11705 12026 48013;48014 48014 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.9054 2 820.904325 1639.7941 69226.39 0.59598 0.00048924 0.10322 8.4735E-05 0.6992 0.00057398 820.904428305058 824.910987165094 45.804 1.3027 45.804 45.335 46.638 0 341 94 7 0 0 0 0.003615 2 21971 42.095 42.095 1 0.48722 0.38413 0 3082800 1959900 1122900 30815 1489 11705 12026 48015;48016 48016 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 824.9116 2 820.904325 1639.7941 67429.82 0.59093 0.0004851 0.32422 0.00026616 0.91515 0.00075125 820.904354577729 824.911392183074 49.428 0.89574 49.428 49.069 49.965 -3.8147E-06 400 73 8 0 0 0 0.00057328 1 24117 53.252 47.149 1 0.46225 0.36131 0 16237000 10421000 5815400 30816 1489 11705 12026 48017 48017 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 824.9116 2 820.904325 1639.7941 67143.3 0.4232 0.0003474 0.34715 0.00028498 0.77035 0.00063238 820.904752723157 824.911628056008 70.535 1.5312 70.535 70.067 71.599 0 742 104 12 0 0 0 3.7914E-06 4 37316 92.925 87.08 1 0.49083 0.43192 0 241480000 159950000 81533000 30817 1489 11705 12026 48018;48019;48020;48021 48021 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 824.9116 2 820.904325 1639.7941 66793.44 0.42246 0.0003468 0.32484 0.00026666 0.74731 0.00061347 820.904440146479 824.911482246975 49.868 1.1384 49.868 49.487 50.625 3.8147E-06 484 92 9 0 0 0 0.00057328 1 23746 53.252 47.149 1 0.47883 0.38483 0 16906000 11526000 5379800 30818 1489 11705 12026 48022 48022 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 821.4061 2 820.904325 1639.7941 67200.66 0.53314 0.00043766 0.027021 2.2182E-05 0.56016 0.00045984 820.904396553343 824.91126456244 52.531 1.4166 52.531 52.106 53.523 3.8147E-06 572 108 7 0 0 0 0.00025385 1 25334 63.944 63.944 1 0.48492 0.40055 0 11539000 7394800 4144400 30819 1489 11705 12026 48023 48023 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.9048 2 820.904325 1639.7941 NaN NaN NaN 0.35755 0.00029351 NaN NaN NaN NaN 51.669 0.74978 51.669 51.374 52.124 0 0 0 0 0.023365 1 24882 46.592 36.36 1 NaN NaN 0 2573100 2573100 0 30820 1489 11705 12026 48024 48024 SEVCFGK 7 1 0 Unmodified _SEVCFGK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.6917 2 413.691821 825.369089 93924.8 0.16297 6.7419E-05 -0.035922 -1.4861E-05 0.12705 5.2558E-05 413.69167840322 417.698863268447 27.444 0.41632 27.444 27.209 27.625 0 83 23 5 0 0 0 0.026656 2 12622 75.311 54.046 1 0.73349 0.76852 0 30195000 17948000 12247000 30821 125 11706 12027 48025;48026 48026 SEVEMEGPEECLGR 14 0 1 Oxidation (M) _SEVEM(ox)EGPEECLGR_ SEVEM(1)EGPEECLGR SEVEM(52.69)EGPEECLGR 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.3433 2 819.34272 1636.67089 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.227 1 43.227 42.727 43.727 0 0 0 0 0.0039788 1 23104 52.693 46.309 1 30822 1260 11707 12028 48027 48027 966 SEVEMEGPEECLGR 14 0 1 Oxidation (M) _SEVEM(ox)EGPEECLGR_ SEVEM(1)EGPEECLGR SEVEM(78.34)EGPEECLGR 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.3428 2 819.34272 1636.67089 69351.43 0.91674 0.00075113 0.36056 0.00029543 1.2773 0.0010466 819.34247897047 824.347488815143 42.393 0.3153 42.393 42.258 42.573 0 62 24 4 0 0 0 6.8176E-05 3 22845 78.342 74.391 1 1.1199 1.1182 0 7000400 2340600 4659800 30823 1260 11707 12028 48028;48029;48030 48029 966 SEVLAEESIVCLQK 14 1 0 Unmodified _SEVLAEESIVCLQK_ 0 0 0 A0A024RC67;O43663;H0YM42;H0YLA0 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.4158 2 802.913638 1603.81272 NaN NaN NaN -0.3132 -0.00025147 NaN NaN NaN NaN 92.4 0.46797 92.4 92.274 92.742 -7.6294E-06 0 0 0 1.7222E-06 1 55974 101.93 87.771 1 NaN NaN 0 11361000 11361000 0 30824 353 11708 12029 48031 48031 SEVLAEESIVCLQK 14 1 0 Unmodified _SEVLAEESIVCLQK_ 0 0 0 A0A024RC67;O43663;H0YM42;H0YLA0 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.922 2 802.913638 1603.81272 NaN NaN NaN -0.48163 -0.00038671 NaN NaN NaN NaN 91.763 0.51794 91.763 91.532 92.05 0 0 0 0 0.0002677 1 56779 82.494 62.364 1 NaN NaN 0 10584000 0 10584000 30825 353 11708 12029 48032 48032 SEVLAEESIVCLQK 14 1 0 Unmodified _SEVLAEESIVCLQK_ 0 0 0 A0A024RC67;O43663;H0YM42;H0YLA0 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 806.9211 2 802.913638 1603.81272 66898.31 0.64873 0.00052088 0.010546 8.4674E-06 0.65928 0.00052934 802.913795387922 806.920882017504 106.08 0.57916 106.08 105.81 106.39 -7.6294E-06 152 27 8 0 0 0 1.7714E-10 3 60574 124.67 115.48 1 1.0449 0.81558 0 12042000 5848700 6193100 30826 353 11708 12029 48033;48034;48035 48035 SEVLAEESIVCLQK 14 1 0 Unmodified _SEVLAEESIVCLQK_ 0 0 0 A0A024RC67;O43663;H0YM42;H0YLA0 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 807.423 2 802.913638 1603.81272 67542.04 0.60482 0.00048562 -0.083607 -6.7129E-05 0.52121 0.00041849 802.913715312846 806.920825038774 105.89 0.58172 105.89 105.64 106.22 0 203 33 8 0 0 0 5.7533E-05 2 59526 91.937 91.937 1 1.1581 0.95696 0 11670000 5845900 5824500 30827 353 11708 12029 48036;48037 48037 SEVPEDLAGFIELFQTPSHTK 21 1 0 Unmodified _SEVPEDLAGFIELFQTPSHTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 782.7288 3 782.393507 2344.15869 68492.09 0.85501 0.00066895 0.018218 1.4253E-05 0.87323 0.00068321 782.727854619085 785.399265500738 131.84 1.6625 131.84 131.1 132.76 0 891 110 12 0 0 0 8.6646E-09 2 86208 57.009 57.009 1 1.8008 2.0404 0 91719000 32769000 58951000 30828 1569 11709 12030 48038;48039 48038 SEVPEDLAGFIELFQTPSHTK 21 1 0 Unmodified _SEVPEDLAGFIELFQTPSHTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.4001 3 782.393507 2344.15869 68306.11 1.0633 0.00083192 -0.19193 -0.00015016 0.87137 0.00068175 782.727694622835 785.399126536285 131.17 1.5705 131.17 130.55 132.12 0 789 114 9 0 0 0 2.7797E-06 4 87943 48.656 48.656 1 1.7572 1.9955 0 142170000 54105000 88068000 30829 1569 11709 12030 48040;48041;48042;48043 48042 SEVPEDLAGFIELFQTPSHTK 21 1 0 Unmodified _SEVPEDLAGFIELFQTPSHTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1173.0914 2 1173.08662 2344.15869 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.06 1 131.06 130.56 131.56 0 0 0 0 0.0041395 1 87678 46.408 32.729 1 30830 1569 11709 12030 48044 48044 SEVPEDLAGFIELFQTPSHTK 21 1 0 Unmodified _SEVPEDLAGFIELFQTPSHTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 785.3999 3 782.393507 2344.15869 66432.67 0.94303 0.00073782 -0.096283 -7.5331E-05 0.84675 0.00066249 782.728445859518 785.399237025979 134.73 0.37936 134.73 134.47 134.85 0 31 9 9 0 0 0 0.00043954 1 81580 34.221 34.221 1 3.8139 3.2944 0 214070000 46200000 167870000 30831 1569 11709 12030 48045 48045 SEVQQPVHPK 10 1 0 Unmodified _SEVQQPVHPK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.8066 2 574.806562 1147.59857 79688.33 0.37606 0.00021616 0.06638 3.8155E-05 0.44244 0.00025432 574.806542217893 578.813603038008 17.248 0.45469 17.248 17.081 17.535 0 57 14 8 0 0 0 2.8483E-09 2 4435 125.82 125.82 1 2.2942 2.4663 0 38912000 11615000 27296000 30832 1010 11710 12031 48046;48047 48047 SEVQQPVHPK 10 1 0 Unmodified _SEVQQPVHPK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.814 2 574.806562 1147.59857 79802.3 0.88612 0.00050935 0.51549 0.00029631 1.4016 0.00080566 574.806930045893 578.813854442018 17.153 0.50079 17.153 16.985 17.486 0 62 15 8 0 0 0 4.9576E-16 2 4132 151.48 142.04 1 2.3771 2.6568 0 53217000 16110000 37108000 30833 1010 11710 12031 48048;48049 48048 SEVQQPVHPK 10 1 0 Unmodified _SEVQQPVHPK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 383.541 3 383.540134 1147.59857 95742.23 0.52784 0.00020245 0.34956 0.00013407 0.8774 0.00033652 383.539983394239 386.211608769656 17.149 0.5195 17.149 16.888 17.407 -1.9073E-06 60 15 8 0 0 0 0.017646 1 4177 28.204 28.204 1 2.3314 2.3352 0 15720000 4657000 11063000 30834 1010 11710 12031 48050 48050 SEVQQPVHPK 10 1 0 Unmodified _SEVQQPVHPK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 578.8137 2 574.806562 1147.59857 80291.31 0.12195 7.0098E-05 0.57964 0.00033318 0.70159 0.00040328 574.806765955845 578.814005711032 18.148 0.28597 18.148 17.988 18.274 0 66 14 7 0 0 0 0.0010698 2 4247 76.679 76.679 1 5.1061 3.9751 0 3353900 601270 2752600 30835 1010 11710 12031 48051;48052 48051 SEVQQPVHPK 10 1 0 Unmodified _SEVQQPVHPK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.8136 2 574.806562 1147.59857 79876.8 0.0074404 4.2768E-06 0.41988 0.00024135 0.42732 0.00024563 574.806891315364 578.813871296592 18.072 0.29105 18.072 17.949 18.24 0 75 19 7 0 0 0 0.00072248 1 3785 82.279 73.065 1 4.6324 3.706 0 2433700 391520 2042100 30836 1010 11710 12031 48053 48053 SEVSSDEDIQFR 12 0 1 Unmodified _SEVSSDEDIQFR_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6;V9GZL3 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3217 2 706.320428 1410.6263 72831.43 0.68371 0.00048292 0.34147 0.00024118 1.0252 0.00072411 706.821776861775 711.324838698907 55.332 0.60604 55.332 54.991 55.597 0 353 57 8 0 0 0 4.62E-05 3 30983 98.943 90.722 1 1.1093 1.2261 0 57414000 28213000 29201000 30837 1228 11711 12032 48054;48055;48056 48055 SEVSSDEDIQFR 12 0 1 Unmodified _SEVSSDEDIQFR_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6;V9GZL3 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.3217 2 706.320428 1410.6263 72107.16 0.83609 0.00059055 -0.090295 -6.3777E-05 0.74579 0.00052677 706.821568209919 711.826243088486 54.474 0.55506 54.474 54.151 54.706 0 316 46 10 0 0 0 3.5535E-06 2 30967 111.06 97.704 1 1.0033 1.1596 0 56139000 27237000 28902000 30838 1228 11711 12032 48057;48058 48057 SEVSSDEDIQFR 12 0 1 Unmodified _SEVSSDEDIQFR_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6;V9GZL3 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 711.3253 2 706.320428 1410.6263 72719.96 0.62859 0.00044398 0.0048451 3.4222E-06 0.63343 0.00044741 706.821870572455 711.324538895522 64.641 0.61565 64.641 64.28 64.896 0 228 41 7 0 0 0 0.00026837 2 33390 73.499 64.142 1 0.8575 0.73349 0 8717900 4431700 4286200 30839 1228 11711 12032 48059;48060 48060 SEVSSDEDIQFR 12 0 1 Unmodified _SEVSSDEDIQFR_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5;H0YFD6;V9GZL3 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 706.8221 2 706.320428 1410.6263 72071.34 0.37152 0.00026241 0.028874 2.0395E-05 0.40039 0.0002828 706.32052500414 711.324615438215 65.221 0.58658 65.221 64.893 65.48 0 263 42 10 0 0 0 0.00018714 2 32885 87.298 79.373 1 0.87877 0.71621 0 9560000 4921400 4638600 30840 1228 11711 12032 48061;48062 48061 SEVTELRR 8 0 2 Unmodified _SEVTELRR_ 0 0 1 CON__P08779;P08779;Q16195;K7ENW6 CON__P08779 CON__P08779 KRT16;keratin Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2723 2 495.272355 988.530158 NaN NaN NaN 0.34398 0.00017036 NaN NaN NaN NaN 20.501 0.36254 20.501 20.345 20.708 0 0 0 0 0.003313 1 6940 114.65 22.158 1 NaN NaN 0 33905000 33905000 0 + 30841 1159 11712 12033 48063 48063 SEVTELRR 8 0 2 Unmodified _SEVTELRR_ 0 0 1 CON__P08779;P08779;Q16195;K7ENW6 CON__P08779 CON__P08779 KRT16;keratin Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2722 2 495.272355 988.530158 NaN NaN NaN 0.94493 0.000468 NaN NaN NaN NaN 20.335 0.32386 20.335 20.192 20.516 0 0 0 0 0.001548 1 6609 121.99 32.439 1 NaN NaN 0 58361000 58361000 0 + 30842 1159 11712 12033 48064 48064 SEVTELRR 8 0 2 Unmodified _SEVTELRR_ 0 0 1 CON__P08779;P08779;Q16195;K7ENW6 CON__P08779 CON__P08779 KRT16;keratin Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2724 2 495.272355 988.530158 NaN NaN NaN 0.013347 6.6104E-06 NaN NaN NaN NaN 22.017 0.43285 22.017 21.819 22.252 0 0 0 0 0.014428 1 6901 77.282 16.523 1 NaN NaN 0 5702600 5702600 0 + 30843 1159 11712 12033 48065 48065 SEVTELRR 8 0 2 Unmodified _SEVTELRR_ 0 0 1 CON__P08779;P08779;Q16195;K7ENW6 CON__P08779 CON__P08779 KRT16;keratin Keratin, type I cytoskeletal 16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.272 2 495.272355 988.530158 NaN NaN NaN 0.071904 3.5612E-05 NaN NaN NaN NaN 21.848 0.3496 21.848 21.69 22.04 0 0 0 0 0.015839 1 6345 74.255 22.92 1 NaN NaN 0 4047200 4047200 0 + 30844 1159 11712 12033 48066 48066 SEWGSLLEELVAEGK 15 1 0 Unmodified _SEWGSLLEELVAEGK_ 0 0 0 P17858;B4E108 P17858 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.9183 2 823.917235 1645.81992 67325.98 1.0109 0.00083288 0.19357 0.00015949 1.2045 0.00099237 823.917628735384 827.924437846403 132.12 0.61215 132.12 131.83 132.44 0 195 41 7 0 0 0 4.905E-07 3 86271 102.66 102.66 1 1.3067 1.2909 0 9360000 4089700 5270200 30845 1495 11713 12034 48067;48068;48069 48068 SEWGSLLEELVAEGK 15 1 0 Unmodified _SEWGSLLEELVAEGK_ 0 0 0 P17858;B4E108 P17858 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.9248 2 823.917235 1645.81992 67312.01 1.0555 0.00086966 0.19797 0.00016311 1.2535 0.0010328 823.91797276274 827.924205760598 131.64 0.62199 131.64 131.41 132.03 1.5259E-05 216 45 6 0 0 0 1.0667E-22 2 88076 149.23 149.23 1 1.3022 1.3193 0 12964000 6171700 6791900 30846 1495 11713 12034 48070;48071 48071 SEWNTVER 8 0 1 Unmodified _SEWNTVER_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.7412 2 510.740888 1019.46722 85911.97 0.47262 0.00024139 -0.29363 -0.00014997 0.17899 9.1417E-05 510.740670080966 515.744884762387 31.993 0.95478 31.993 31.656 32.611 1.9073E-06 251 90 4 0 0 0 0.012108 1 15815 68.383 17.751 1 0.8679 0.87062 0 17559000 10168000 7390900 30847 886 11714 12035 48072 48072 SEWSDLLSDLQK 12 1 0 Unmodified _SEWSDLLSDLQK_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;F8VX13;F8VNX2;F8VZQ1 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.8586 2 710.851364 1419.68817 NaN NaN NaN 0.16242 0.00011545 NaN NaN NaN NaN 118.53 0.58365 118.53 118.26 118.85 0 0 0 0 1.5289E-08 1 76022 113.93 87.542 1 NaN NaN 0 10952000 0 10952000 30848 61 11715 12036 48073 48073 SEWSDLLSDLQK 12 1 0 Unmodified _SEWSDLLSDLQK_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;F8VX13;F8VNX2;F8VZQ1 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.8589 2 710.851364 1419.68817 NaN NaN NaN 0.58316 0.00041454 NaN NaN NaN NaN 118.12 0.51017 118.12 117.83 118.34 0 0 0 0 0.00054622 1 77502 87.789 68.518 1 NaN NaN 0 18136000 0 18136000 30849 61 11715 12036 48074 48074 SEWSDLLSDLQK 12 1 0 Unmodified _SEWSDLLSDLQK_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;F8VX13;F8VNX2;F8VZQ1 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.8594 2 710.851364 1419.68817 73898.15 0.74005 0.00052607 0.24686 0.00017548 0.98691 0.00070155 710.851131645535 714.858634795065 130.69 0.44951 130.69 130.5 130.95 -1.5259E-05 90 20 6 0 0 0 0.0060504 2 79235 49.5 44.805 1 1.9525 1.5914 0 2660600 1168700 1491800 30850 61 11715 12036 48075;48076 48075 SEWSDLLSDLQK 12 1 0 Unmodified _SEWSDLLSDLQK_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;F8VX13;F8VNX2;F8VZQ1 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.8593 2 710.851364 1419.68817 73754.81 0.99504 0.00070733 0.040229 2.8597E-05 1.0353 0.00073592 710.851354831544 714.858243911457 130.51 0.42998 130.51 130.31 130.74 0 50 17 6 0 0 0 0.0091928 2 78209 47.288 42.592 1 2.2317 1.7913 0 2472200 791090 1681100 30851 61 11715 12036 48077;48078 48077 SEYSSGMEADIAK 13 1 0 Oxidation (M) _SEYSSGM(ox)EADIAK_ SEYSSGM(1)EADIAK SEYSSGM(53.76)EADIAK 0 1 0 F8WAJ0;Q9H8H2 F8WAJ0 F8WAJ0 DDX31 Probable ATP-dependent RNA helicase DDX31 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.312 2 702.303389 1402.59223 NaN NaN NaN 1.0637 0.00074703 NaN NaN NaN NaN 36.894 0.70557 36.894 36.362 37.068 0 0 0 0 0.0027494 1 19095 53.756 38.127 1 NaN NaN 0 24567000 0 24567000 30852 1268 11716 12037 48079 48079 974 SEYSSGMEADVAK 13 1 0 Oxidation (M) _SEYSSGM(ox)EADVAK_ SEYSSGM(1)EADVAK SEYSSGM(78.34)EADVAK 0 1 0 B4DYZ1 B4DYZ1 B4DYZ1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.3018 2 695.295564 1388.57658 NaN NaN NaN -0.22386 -0.00015565 NaN NaN NaN NaN 23.131 0.13936 23.131 23.045 23.184 0 0 0 0 0.00030931 1 9049 78.342 73.558 1 NaN NaN 0 1234400 0 1234400 30853 1053 11717 12038 48080 48080 823 SEYSSGMEADVAK 13 1 0 Oxidation (M) _SEYSSGM(ox)EADVAK_ SEYSSGM(1)EADVAK SEYSSGM(42.72)EADVAK 0 1 0 B4DYZ1 B4DYZ1 B4DYZ1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.2968 2 695.295564 1388.57658 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.129 1 23.129 22.629 23.629 1.9073E-06 0 0 0 0.018383 1 9065 42.718 23.447 1 30854 1053 11717 12038 48081 48081 823 SEYSVHSSLASK 12 1 0 Unmodified _SEYSVHSSLASK_ 0 0 0 A0JLU2;B4DYG2;O43683 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8251 2 647.817324 1293.62009 NaN NaN NaN 0.29333 0.00019002 NaN NaN NaN NaN 24.879 0.18149 24.879 24.756 24.938 0 0 0 0 2.7587E-09 1 10570 117.52 97.191 1 NaN NaN 0 9573200 0 9573200 30855 641 11718 12039 48082 48082 SEYSVHSSLASK 12 1 0 Unmodified _SEYSVHSSLASK_ 0 0 0 A0JLU2;B4DYG2;O43683 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.8248 2 647.817324 1293.62009 75394.87 0.26724 0.00017313 0.40199 0.00026042 0.66924 0.00043354 648.319091815458 651.824362931725 28.491 0.43169 28.491 28.262 28.693 1.9073E-06 85 25 5 0 0 0 0.021273 1 10851 38.783 38.783 1 1.0985 0.90996 0 1720300 837710 882630 30856 641 11718 12039 48083 48083 SFAANGIQAHPESSTGSDAR 20 0 1 Unmodified _SFAANGIQAHPESSTGSDAR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3124 3 668.311958 2001.91405 72453.65 0.66063 0.00044151 0.10772 7.1989E-05 0.76835 0.0005135 668.312309705852 671.64826099252 35.094 0.45245 35.094 34.872 35.324 0 230 40 8 0 0 0 1.2824E-13 2 17531 92.492 92.492 1 0.89985 0.94193 0 39059000 18963000 20096000 30857 1813 11719 12040 48084;48085 48084 SFAANGIQAHPESSTGSDAR 20 0 1 Unmodified _SFAANGIQAHPESSTGSDAR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1006.9706 2 1001.9643 2001.91405 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.194 1 35.194 34.694 35.694 0 0 0 0 0.0044399 1 17671 48.527 33.627 1 30858 1813 11719 12040 48086 48086 SFAANGIQAHPESSTGSDAR 20 0 1 Unmodified _SFAANGIQAHPESSTGSDAR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.6489 3 668.311958 2001.91405 72093.29 0.72738 0.00048611 -2.0263 -0.0013542 -1.2989 -0.00086808 668.31207368671 671.648641605911 34.193 0.65206 34.193 33.958 34.61 0 214 48 9 0 0 0 1.3863E-18 3 17198 104.03 101.5 1 1.1868 1.3481 0 48748000 24848000 23900000 30859 1813 11719 12040 48087;48088;48089 48088 SFAANGIQAHPESSTGSDAR 20 0 1 Unmodified _SFAANGIQAHPESSTGSDAR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1001.9666 2 1001.9643 2001.91405 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.065 1 34.065 33.565 34.565 0 0 0 0 0.041674 1 17188 33.842 25.329 1 30860 1813 11719 12040 48090 48090 SFAANGIQAHPESSTGSDAR 20 0 1 Unmodified _SFAANGIQAHPESSTGSDAR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1006.968 2 1001.9643 2001.91405 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.165 1 34.165 33.665 34.665 0 0 0 0 1.9379E-07 1 17259 82.651 69.248 1 30861 1813 11719 12040 48091 48091 SFAANGIQAHPESSTGSDAR 20 0 1 Unmodified _SFAANGIQAHPESSTGSDAR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.6462 3 668.311958 2001.91405 74061.45 0.40064 0.00026775 0.11031 7.3724E-05 0.51095 0.00034148 668.646288481966 671.648188380613 40.5 0.49385 40.5 40.305 40.798 0 245 39 10 0 0 0 2.5833E-09 1 18681 63.998 63.998 1 1.4665 1.1966 0 15497000 5462600 10034000 30862 1813 11719 12040 48092 48092 SFAANGIQAHPESSTGSDAR 20 0 1 Unmodified _SFAANGIQAHPESSTGSDAR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.9828 3 668.311958 2001.91405 73854.4 0.30463 0.00020358 0.077708 5.1933E-05 0.38233 0.00025552 668.646296498884 671.648087745632 40.734 0.48341 40.734 40.467 40.95 0 270 37 9 0 0 0 1.3863E-18 3 18253 104.03 103.29 1 1.5325 1.237 0 10900000 3348400 7551200 30863 1813 11719 12040 48093;48094;48095 48093 SFAGAVSPQEEEEFRR 16 0 2 Unmodified _SFAGAVSPQEEEEFRR_ 0 0 1 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B4DVK5 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.962 3 613.627107 1837.85949 77852.54 0.64709 0.00039707 0.45048 0.00027643 1.0976 0.0006735 613.961588193094 620.299540778196 59.39 0.56849 59.39 59.018 59.587 0 150 43 5 0 0 0 8.4114E-05 2 33844 47.545 43.443 1 1.6224 1.7581 0 25125000 10306000 14819000 30864 745 11720 12041 48096;48097 48097 SFAGAVSPQEEEEFRR 16 0 2 Unmodified _SFAGAVSPQEEEEFRR_ 0 0 1 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B4DVK5 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.9621 3 613.627107 1837.85949 76188.08 0.4008 0.00024594 0.32222 0.00019772 0.72301 0.00044366 613.627130232871 620.299510914616 58.171 0.63778 58.171 57.791 58.428 0 194 47 8 0 0 0 0.00087893 1 33671 35.757 31.655 1 1.5128 1.7132 0 31569000 13526000 18042000 30865 745 11720 12041 48098 48098 SFAGAVSPQEEEEFRR 16 0 2 Unmodified _SFAGAVSPQEEEEFRR_ 0 0 1 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B4DVK5 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.301 3 613.627107 1837.85949 77835.92 0.26954 0.0001654 -0.33215 -0.00020382 -0.062609 -3.8418E-05 613.627380386083 620.300009849617 69.329 0.38902 69.329 69.132 69.521 0 135 24 8 0 0 0 0.00041264 2 36272 44.294 39.903 1 0.85144 0.74989 0 4211400 2257400 1954000 30866 745 11720 12041 48099;48100 48099 SFAGAVSPQEEEEFRR 16 0 2 Unmodified _SFAGAVSPQEEEEFRR_ 0 0 1 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B4DVK5 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.3007 3 613.627107 1837.85949 77980.77 0.38882 0.00023859 0.14023 8.6047E-05 0.52905 0.00032464 613.961594329257 620.299583209858 69.873 0.37517 69.873 69.678 70.053 0 111 27 6 0 0 0 0.001433 2 35863 35.757 35.757 1 0.88594 0.80117 0 3456200 1727300 1728900 30867 745 11720 12041 48101;48102 48102 SFAGNLNTYK 10 1 0 Unmodified _SFAGNLNTYK_ 0 0 0 Q01813;Q8WTZ9;O14943;B1APP6 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.7875 2 557.780013 1113.54547 79985.02 0.42739 0.00023839 0.22653 0.00012636 0.65392 0.00036475 557.780212915115 561.787116689538 49.632 0.53595 49.632 49.387 49.923 0 112 35 5 0 0 0 0.00062918 1 27262 83.783 50.232 1 2.8347 3.0555 0 33981000 9680000 24301000 30868 1677 11721 12042 48103 48103 SFANEEGEAQK 11 1 0 Unmodified _SFANEEGEAQK_ 0 0 0 X5CKB3;B2R9F3;A0A140T9T7;A0A0S2Z5A6;Q03518;B7Z7P4;Q6QWC1;Q6QWC0 X5CKB3 X5CKB3 TAP1 Antigen peptide transporter 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.2796 2 605.272749 1208.53095 79765.3 0.39729 0.00024047 -0.17648 -0.00010682 0.22081 0.00013365 605.273129919405 609.279292246771 20.35 0.36208 20.35 20.108 20.471 0 42 13 5 0 0 0 3.1989E-05 2 6822 100.25 75.427 1 0.97017 0.95945 0 8356400 4318900 4037600 30869 578 11722 12043 48104;48105 48104 SFANTLVDVCAYAGSGNVLK 20 1 0 Unmodified _SFANTLVDVCAYAGSGNVLK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13041;H7C1H2 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1047.5219 2 1043.51732 2085.02009 NaN NaN NaN -0.27149 -0.0002833 NaN NaN NaN NaN 114.69 0.28627 114.69 114.52 114.81 0 0 0 0 0.00077194 1 72796 49.298 36.42 1 NaN NaN 0 4312800 0 4312800 30870 1707 11723 12044 48106 48106 SFCISTLANTK 11 1 0 Unmodified _SFCISTLANTK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.3209 2 621.313363 1240.61217 76891.13 0.64541 0.000401 -0.056009 -3.4799E-05 0.5894 0.0003662 621.313311943313 625.320425719258 91.74 0.65231 91.74 91.417 92.069 7.6294E-06 169 45 5 0 0 0 0.015285 1 50926 46.406 43.873 1 1.6069 1.2692 0 4114700 1844500 2270200 30871 1233 11724 12045 48107 48107 SFCISTLANTK 11 1 0 Unmodified _SFCISTLANTK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.321 2 621.313363 1240.61217 77981.45 0.45051 0.00027991 0.27355 0.00016996 0.72406 0.00044987 621.313449507661 625.320628904589 91.59 0.58665 91.59 91.298 91.884 0 174 39 5 0 0 0 0.019169 1 50043 44.425 41.017 1 1.7732 1.4404 0 4460000 1503800 2956200 30872 1233 11724 12045 48108 48108 SFCSEGCVLLYK 12 1 0 Unmodified _SFCSEGCVLLYK_ 0 0 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.8464 2 731.838888 1461.66322 74521.48 0.46905 0.00034327 0.13701 0.00010027 0.60606 0.00044354 731.838824172432 735.845927592816 96.801 0.40059 96.801 96.638 97.038 0 70 17 7 0 0 0 0.00059524 1 53585 68.657 60.732 1 1.938 1.6067 0 1816100 601690 1214400 30873 681 11725 12046 48109 48109 SFDFEIETK 9 1 0 Unmodified _SFDFEIETK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.274 2 558.266404 1114.51826 80457.54 0.78218 0.00043667 1.0982 0.00061306 1.8803 0.0010497 558.266968779163 562.27407926557 85.406 0.97912 85.406 85.111 86.09 -7.6294E-06 449 82 9 0 0 0 0.00056832 2 51162 97.431 97.431 1 0.75017 0.89072 0 531320000 304550000 226770000 30874 167 11726 12047 48110;48111 48111 SFDFEIETK 9 1 0 Unmodified _SFDFEIETK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.2737 2 558.266404 1114.51826 81325.26 0.53831 0.00030052 0.57478 0.00032088 1.1131 0.0006214 558.266723154238 562.273746944953 84.393 0.87894 84.393 84.148 85.027 0 446 72 9 0 0 0 0.001292 2 51698 87.308 78.395 1 0.72157 0.84994 0 520350000 306610000 213740000 30875 167 11726 12047 48112;48113 48112 SFDFEIETK 9 1 0 Unmodified _SFDFEIETK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.2739 2 558.266404 1114.51826 80540.48 0.63497 0.00035448 0.66873 0.00037333 1.3037 0.00072781 558.266679437165 562.273772564 97.563 1.2029 97.563 97.203 98.405 7.6294E-06 405 72 9 0 0 0 0.0012155 2 54817 88.37 81.176 1 0.96392 0.80983 0 53440000 27509000 25931000 30876 167 11726 12047 48114;48115 48114 SFDFEIETK 9 1 0 Unmodified _SFDFEIETK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 558.2676 2 558.266404 1114.51826 81543.19 0.4669 0.00026065 0.6991 0.00039028 1.166 0.00065093 558.26662457519 562.273844039466 97.461 1.1086 97.461 97.15 98.258 0 353 62 10 0 0 0 0.0015501 2 53967 83.948 78.639 1 0.96727 0.81198 0 48815000 23434000 25382000 30877 167 11726 12047 48116;48117 48117 SFDLIHSPHGELK 13 1 0 Unmodified _SFDLIHSPHGELK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.596 3 493.924536 1478.75178 86292.4 0.18187 8.9828E-05 -0.064186 -3.1703E-05 0.11768 5.8125E-05 493.924550829771 496.595608752047 68.336 1.1439 68.336 67.849 68.993 7.6294E-06 378 83 8 0 0 0 4.4456E-05 2 35658 66.215 61.585 1 1.2585 1.0078 0 20834000 9827900 11006000 30878 1827 11727 12048 48118;48119 48118 SFDLIHSPHGELK 13 1 0 Unmodified _SFDLIHSPHGELK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 496.5958 3 493.924536 1478.75178 84335.14 0.093078 4.5973E-05 0.1551 7.6605E-05 0.24817 0.00012258 493.924579901375 496.595868665803 68.538 0.90754 68.538 68.16 69.067 0 306 64 8 0 0 0 0.0012877 2 34926 49.31 49.31 1 1.3057 1.0482 0 14255000 6168000 8087100 30879 1827 11727 12048 48120;48121 48121 SFDVNKPGCEVDDLK 15 2 0 Unmodified _SFDVNKPGCEVDDLK_ 0 0 1 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.2807 3 574.938293 1721.79305 83079.8 0.67192 0.00038631 -0.56749 -0.00032627 0.10443 6.0038E-05 575.272680396818 580.280862589492 58.202 0.46143 58.202 57.99 58.451 3.8147E-06 78 32 6 0 0 0 0.0015929 2 33785 34.612 34.612 1 2.0747 2.3702 0 14659000 4573100 10086000 30880 1559 11728 12049 48122;48123 48122 SFDVNKPGCEVDDLK 15 2 0 Unmodified _SFDVNKPGCEVDDLK_ 0 0 1 P41091;Q2VIR3;F8W810 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.282 3 574.938293 1721.79305 83903.07 0.40811 0.00023464 0.10228 5.8806E-05 0.51039 0.00029344 574.938475256674 580.281210461619 69.727 0.33617 69.727 69.587 69.923 0 82 23 6 0 0 0 0.030878 1 35760 16.399 16.399 1 1.0413 0.90683 0 2461800 1279200 1182700 30881 1559 11728 12049 48124 48124 SFDYNYR 7 0 1 Unmodified _SFDYNYR_ 0 0 0 Q5JRI1;Q53GD7;A0A0S2Z504;O75494;B3KNY6 Q5JRI1 Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.7137 2 482.711599 963.408646 88236.89 0.21466 0.00010362 0.34719 0.00016759 0.56185 0.00027121 482.711811371813 487.715618255682 42.27 0.46504 42.27 42.038 42.503 3.8147E-06 153 34 6 0 0 0 0.032098 2 22346 66.087 16.347 1 1.2587 1.3952 0 65405000 28752000 36653000 30882 574 11729 12050 48125;48126 48125 SFEAPATINSASLHPEK 17 1 0 Unmodified _SFEAPATINSASLHPEK_ 0 0 0 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.9759 3 600.303852 1797.88973 78136.33 0.55425 0.00033272 0.36049 0.00021641 0.91474 0.00054912 600.638219951712 602.975299051737 68.4 0.76507 68.4 68.014 68.78 0 274 67 6 0 0 0 0.00045258 1 39522 40.616 40.616 1 3.3645 3.4094 0 27671000 5640400 22030000 30883 2136 11730 12051 48127 48127 SFEAPATINSASLHPEK 17 1 0 Unmodified _SFEAPATINSASLHPEK_ 0 0 0 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.4608 2 899.95214 1797.88973 NaN NaN NaN 0.029448 2.6502E-05 NaN NaN NaN NaN 68.413 0.38837 68.413 68.233 68.621 0 0 0 0 3.6099E-05 1 39552 76.357 61.091 1 NaN NaN 0 6616700 0 6616700 30884 2136 11730 12051 48128 48128 SFEAPATINSASLHPEK 17 1 0 Unmodified _SFEAPATINSASLHPEK_ 0 0 0 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.9758 3 600.303852 1797.88973 77269.42 0.57056 0.00034251 0.17411 0.00010452 0.74467 0.00044703 600.638205411482 603.309665904068 67.087 0.70122 67.087 66.795 67.496 0 298 58 8 0 0 0 2.1518E-05 3 39635 70.235 70.235 1 3.7688 4.1525 0 43273000 8605800 34668000 30885 2136 11730 12051 48129;48130;48131 48129 SFEAPATINSASLHPEK 17 1 0 Unmodified _SFEAPATINSASLHPEK_ 0 0 0 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.4617 2 899.95214 1797.88973 NaN NaN NaN -0.03522 -3.1696E-05 NaN NaN NaN NaN 67.095 0.36736 67.095 66.937 67.304 0 0 0 0 6.7491E-09 1 39695 94.122 78.856 1 NaN NaN 0 6670800 0 6670800 30886 2136 11730 12051 48132 48132 SFEAPATINSASLHPEK 17 1 0 Unmodified _SFEAPATINSASLHPEK_ 0 0 0 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.9751 3 600.303852 1797.88973 78533.17 0.60712 0.00036446 0.50157 0.00030109 1.1087 0.00066555 600.305032054483 602.975425961556 78.577 0.46375 78.577 78.376 78.84 0 168 31 8 0 0 0 0.053311 1 41324 13.627 13.627 1 2.7367 2.2325 0 6012300 1547500 4464800 30887 2136 11730 12051 48133 48133 SFEDPPNHAR 10 0 1 Unmodified _SFEDPPNHAR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.2697 2 585.270344 1168.52613 79470.18 0.43821 0.00025647 2.1852 0.0012789 2.6234 0.0015354 585.27076831865 590.778023731352 19.117 0.49508 19.117 18.901 19.396 0 73 24 6 0 0 0 0.01936 1 5532 47.082 47.082 1 0.52895 0.52834 0 16823000 6743100 10080000 30888 222 11731 12052 48134 48134 SFEQISANITK 11 1 0 Unmodified _SFEQISANITK_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;B4E162;A0A0S2Z4A8;Q7KYX9;F8VP00 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.3314 2 619.324785 1236.63502 76312.21 0.65841 0.00040777 0.067505 4.1807E-05 0.72591 0.00044957 619.324620065015 623.331887729798 69.246 0.52428 69.246 69.047 69.572 0 165 43 6 0 0 0 0.00020612 1 40149 92.538 58.152 1 2.3806 2.576 0 35981000 9239000 26742000 30889 61 11732 12053 48135 48135 SFEQISANITK 11 1 0 Unmodified _SFEQISANITK_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;B4E162;A0A0S2Z4A8;Q7KYX9;F8VP00 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.3322 2 619.324785 1236.63502 77740.4 0.44837 0.00027769 0.23302 0.00014432 0.68139 0.000422 619.324883806404 623.332059662766 68.077 0.54208 68.077 67.863 68.405 0 181 43 7 0 0 0 2.6146E-05 2 40374 102.52 62.172 1 2.5323 2.6986 0 36510000 11568000 24941000 30890 61 11732 12053 48136;48137 48136 SFFDNISSELK 11 1 0 Unmodified _SFFDNISSELK_ 0 0 0 Q5TBP9;Q9BX40 Q5TBP9 Q5TBP9 LSM14B Protein LSM14 homolog B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.8173 2 643.816793 1285.61903 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.34 1 107.34 106.84 107.84 0 0 0 0 0.024585 1 68518 51.445 31.116 1 30891 1825 11733 12054 48138 48138 SFFQIMFK 8 1 0 Oxidation (M) _SFFQIM(ox)FK_ SFFQIM(1)FK SFFQIM(55.44)FK 0 1 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.2745 2 532.267696 1062.52084 84938.8 0.52039 0.00027698 -0.77673 -0.00041343 -0.25634 -0.00013644 532.267611209746 536.274579873455 105.81 0.85873 105.81 105.46 106.32 0 183 63 5 0 0 0 0.012153 1 65541 55.441 41.284 1 1.7677 1.7473 0 9394500 3224900 6169600 30892 2125 11734 12055 48139 48139 1952 SFFQIMFK 8 1 0 Oxidation (M) _SFFQIM(ox)FK_ SFFQIM(1)FK SFFQIM(51.79)FK 0 1 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.2675 2 532.267696 1062.52084 83495.76 0.66677 0.0003549 -1.1959 -0.00063655 -0.52915 -0.00028165 532.267653424042 536.274748430686 105.04 0.86838 105.04 104.61 105.48 0 302 66 7 0 0 0 0.014858 1 66680 51.787 41.32 1 1.5507 1.548 0 14337000 4815600 9521800 30893 2125 11734 12055 48140 48140 1952 SFGAEEHEVCR 11 0 1 Unmodified _SFGAEEHEVCR_ 0 0 0 Q9UMW6;Q9UQ60;Q5JNW1;A0A0G2JLV0;A0A087WYD6;X5CMH5;Q59H06;Q03519;Q9H4M2;Q9UP03;A0A140T9S0 Q9UMW6 Q9UMW6 TAP2-G;TAP2;ABCB3 Antigen peptide transporter 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.7903 2 660.785501 1319.55645 NaN NaN NaN 0.46288 0.00030586 NaN NaN NaN NaN 23.859 0.18855 23.859 23.77 23.958 0 0 0 0 9.7131E-05 1 9694 93.096 69.667 1 NaN NaN 0 5716600 0 5716600 30894 433 11735 12056 48141 48141 SFGGEVSWDK 10 1 0 Unmodified _SFGGEVSWDK_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.2634 2 556.256371 1110.49819 82936.48 0.55675 0.0003097 0.54698 0.00030426 1.1037 0.00061395 556.256576594364 560.264070788475 60.906 1.2089 60.906 60.699 61.908 0 238 91 5 0 0 0 0.0025324 2 34740 68.657 68.657 1 0.7401 0.77728 0 30433000 16092000 14341000 30895 886 11736 12057 48142;48143 48143 SFGGEVSWDK 10 1 0 Unmodified _SFGGEVSWDK_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.2628 2 556.256371 1110.49819 83057.56 0.62414 0.00034718 0.14296 7.9524E-05 0.7671 0.0004267 556.256566531703 560.263277296522 59.724 1.0688 59.724 59.468 60.537 -3.8147E-06 323 78 6 0 0 0 0.010458 2 34702 53.327 53.327 1 0.81213 0.84549 0 33882000 18454000 15428000 30896 886 11736 12057 48144;48145 48144 SFGGGTGSGFTSLLMER 17 0 1 Oxidation (M) _SFGGGTGSGFTSLLM(ox)ER_ SFGGGTGSGFTSLLM(1)ER SFGGGTGSGFTSLLM(62.04)ER 0 1 0 A6NHL2 A6NHL2 A6NHL2 TUBAL3 Tubulin alpha chain-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.4088 2 860.403969 1718.79338 63832.89 0.19356 0.00016654 0.29219 0.0002514 0.48574 0.00041793 860.906017382761 865.408614818335 103.56 0.62181 103.56 103.29 103.92 -7.6294E-06 192 52 6 0 0 0 3.9049E-05 1 65622 62.042 62.042 1 2.9828 2.9253 0 13919000 3991200 9927700 30897 682 11737 12058 48146 48146 530 SFGSAQEFAWAHDSSEYAIR 20 0 1 Unmodified _SFGSAQEFAWAHDSSEYAIR_ 0 0 0 P35606;H0Y938 P35606 P35606 COPB2 Coatomer subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.3441 3 753.674897 2258.00286 NaN NaN NaN 0.18168 0.00013693 NaN NaN NaN NaN 92.78 0.22456 92.78 92.624 92.848 0 0 0 0 0.0063273 2 57518 33.707 25.419 1 NaN NaN 0 4360300 0 4360300 30898 1545 11738 12059 48147;48148 48147 SFGSTCQLSEK 11 1 0 Unmodified _SFGSTCQLSEK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.2928 2 622.284802 1242.55505 73975.48 0.4829 0.0003005 -0.1247 -7.7597E-05 0.3582 0.0002229 622.284810427327 626.291860440141 34.525 1.0894 34.525 34.128 35.218 0 503 94 9 0 0 0 0.00013603 3 17136 95.573 88.678 1 0.70193 0.83051 0 422980000 244350000 178630000 30899 1471 11739 12060 48149;48150;48151 48150 SFGSTCQLSEK 11 1 0 Unmodified _SFGSTCQLSEK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.2862 2 622.284802 1242.55505 76031.3 0.52109 0.00032426 -0.040591 -2.5259E-05 0.4805 0.000299 622.284874666725 626.291868816316 33.857 0.86053 33.857 33.463 34.323 0 485 65 12 0 0 0 7.4055E-06 2 16902 109.83 102.93 1 0.70289 0.82861 0 664660000 390120000 274530000 30900 1471 11739 12060 48152;48153 48153 SFGSTCQLSEK 11 1 0 Unmodified _SFGSTCQLSEK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.2922 2 622.284802 1242.55505 74030.96 0.32577 0.00020272 0.088301 5.4949E-05 0.41407 0.00025767 622.285271105856 626.291993950696 39.739 1.2961 39.739 39.318 40.614 0 662 99 12 0 0 0 3.442E-05 4 18056 99.973 93.078 1 1.3005 1.144 0 236960000 105200000 131760000 30901 1471 11739 12060 48154;48155;48156;48157 48154 SFGSTCQLSEK 11 1 0 Unmodified _SFGSTCQLSEK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.2925 2 622.284802 1242.55505 74189.26 0.29264 0.0001821 0.021957 1.3663E-05 0.31459 0.00019577 622.285284805894 626.291972085895 39.839 1.4532 39.839 39.384 40.837 0 741 118 12 0 0 0 0.00019413 4 17644 93.058 86.163 1 1.3766 1.191 0 237660000 100830000 136830000 30902 1471 11739 12060 48158;48159;48160;48161 48158 SFHPEQDAGK 10 1 0 Unmodified _SFHPEQDAGK_ 0 0 0 K7EML4;U3KQC1;K7EIR0;A0A0A0MQU0;Q9BV38 K7EML4 K7EML4 WDR18 WD repeat-containing protein 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.2595 2 558.259445 1114.50434 80694.23 0.45858 0.00025601 -0.16467 -9.193E-05 0.29391 0.00016408 558.258952327207 562.266422142382 16.932 0.19456 16.932 16.826 17.021 0 24 6 6 0 0 0 0.0030553 2 4204 66.27 57.325 1 1.4969 1.5518 0 4100900 1652300 2448500 30903 463 11740 12061 48162;48163 48163 SFHTYDVQK 9 1 0 Unmodified _SFHTYDVQK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.7722 2 562.772188 1123.52982 81170.59 0.36691 0.00020649 -0.013398 -7.5403E-06 0.35351 0.00019894 562.772160332201 566.779276638764 25.18 0.46338 25.18 25.05 25.513 1.9073E-06 86 22 7 0 0 0 1.3255E-25 2 10788 186.76 138.2 1 0.94142 1.058 0 69809000 35484000 34325000 30904 486 11741 12062 48164;48165 48165 SFHTYDVQK 9 1 0 Unmodified _SFHTYDVQK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.7802 2 562.772188 1123.52982 80468.29 0.85399 0.0004806 0.26656 0.00015001 1.1205 0.00063061 562.772211980163 566.779269432463 24.802 0.33233 24.802 24.655 24.987 0 80 14 8 0 0 0 6.285E-25 1 10427 180.44 141.48 1 0.90802 1.0277 0 134230000 73405000 60822000 30905 486 11741 12062 48166 48166 SFHTYDVQK 9 1 0 Unmodified _SFHTYDVQK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.7795 2 562.772188 1123.52982 81300.87 0.57993 0.00032637 -0.18311 -0.00010305 0.39682 0.00022332 562.772023889305 566.779068438737 27.963 0.86444 27.963 27.785 28.649 -1.9073E-06 165 42 7 0 0 0 9.2904E-25 2 11022 176.6 134.85 1 1.2194 0.98844 0 25060000 10963000 14097000 30906 486 11741 12062 48167;48168 48167 SFHTYDVQK 9 1 0 Unmodified _SFHTYDVQK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.7718 2 562.772188 1123.52982 80215.86 0.21683 0.00012202 0.23316 0.00013122 0.44998 0.00025324 562.772230022172 566.7793392772 28.092 0.68936 28.092 27.846 28.535 0 150 33 8 0 0 0 0.0018009 2 10508 80.684 68.729 1 1.2939 1.0365 0 20169000 9259400 10910000 30907 486 11741 12062 48169;48170 48170 SFIAAPCQIITNTSTLLK 18 1 0 Unmodified _SFIAAPCQIITNTSTLLK_ 0 0 0 B5BUA4;Q5FBB7;A0A024R2J4;F8WB17 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 994.0462 2 989.537526 1977.0605 60461.43 0.45381 0.00044907 0.019772 1.9565E-05 0.47359 0.00046863 990.03884474371 993.544877595095 123.98 0.39646 123.98 123.8 124.2 0 140 26 8 0 0 0 3.2614E-05 3 80450 64.65 64.65 1 0.8283 0.84161 0 13742000 7807600 5934500 30908 1075 11742 12063 48171;48172;48173 48173 SFIAAPCQIITNTSTLLK 18 1 0 Unmodified _SFIAAPCQIITNTSTLLK_ 0 0 0 B5BUA4;Q5FBB7;A0A024R2J4;F8WB17 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 990.04 2 989.537526 1977.0605 61361.46 0.49723 0.00049203 0.49525 0.00049007 0.99247 0.00098209 990.039000180415 994.046450341629 123.62 0.35814 123.62 123.42 123.78 -7.6294E-06 133 24 7 0 0 0 7.3156E-06 2 82082 102.66 102.66 1 0.90528 0.90744 0 13848000 7236700 6611200 30909 1075 11742 12063 48174;48175 48175 SFIPSLVEK 9 1 0 Unmodified _SFIPSLVEK_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.2943 2 510.292225 1018.5699 NaN NaN NaN -1.0621 -0.00054199 NaN NaN NaN NaN 91.048 0.85697 91.048 90.673 91.529 0 0 0 0 0.045667 1 54945 48.423 30.388 1 NaN NaN 0 26995000 26995000 0 30910 1726 11743 12064 48176 48176 SFITTDVNPYYDSFVR 16 0 1 Unmodified _SFITTDVNPYYDSFVR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q6NVI4 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 962.9605 2 962.459798 1922.90504 63596.31 0.42285 0.00040698 0.4362 0.00041982 0.85905 0.0008268 962.45963031886 967.463952127853 113.8 0.43401 113.8 113.58 114.01 -7.6294E-06 124 30 6 0 0 0 4.0359E-12 1 72142 117.23 111.74 1 1.0921 1.1196 0 14409000 6583100 7826300 30911 883 11744 12065 48177 48177 SFITTDVNPYYDSFVR 16 0 1 Unmodified _SFITTDVNPYYDSFVR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q6NVI4 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 967.4652 2 962.459798 1922.90504 63645.71 0.44675 0.00042998 -0.24483 -0.00023564 0.20193 0.00019435 962.458759454948 967.965963397182 113.24 0.49284 113.24 113.03 113.53 7.6294E-06 163 34 8 0 0 0 0.00015226 3 73316 65.395 57.263 1 1.4344 1.4391 0 17418000 9750700 7667700 30912 883 11744 12065 48178;48179;48180 48178 SFITTDVNPYYDSFVR 16 0 1 Unmodified _SFITTDVNPYYDSFVR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q6NVI4 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 967.9669 2 962.459798 1922.90504 61720.68 0.25517 0.0002456 0.47265 0.00045491 0.72782 0.0007005 962.459284181744 967.966595685076 124.84 0.46594 124.84 124.64 125.11 0 122 21 9 0 0 0 1.1308E-08 2 74878 106.26 97.953 1 0.75748 0.64982 0 8410400 5157400 3253000 30913 883 11744 12065 48181;48182 48182 SFITTDVNPYYDSFVR 16 0 1 Unmodified _SFITTDVNPYYDSFVR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q6NVI4 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 962.4593 2 962.459798 1922.90504 61812.14 0.28904 0.00027819 0.53634 0.00051621 0.82538 0.0007944 962.459109999637 967.464756261306 124.73 0.50202 124.73 124.53 125.03 -7.6294E-06 128 24 8 0 0 0 0.00015116 2 73865 62.891 62.891 1 0.8086 0.66733 0 8233500 4629700 3603800 30914 883 11744 12065 48183;48184 48183 SFLEFAEDVIQVPR 14 0 1 Unmodified _SFLEFAEDVIQVPR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WWR6 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.4361 2 825.430313 1648.84607 67156.86 1.2252 0.0010113 -0.15385 -0.00012699 1.0713 0.00088429 825.931995974439 830.434266862829 131.13 0.77518 131.13 130.77 131.55 0 281 51 7 0 0 0 2.4912E-09 2 85317 116.23 114.83 1 1.2989 1.3221 0 29904000 11836000 18068000 30915 1689 11745 12066 48185;48186 48185 SFLEFAEDVIQVPR 14 0 1 Unmodified _SFLEFAEDVIQVPR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WWR6 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.9368 2 825.430313 1648.84607 67142.27 1.0453 0.00086283 -0.073345 -6.0541E-05 0.97197 0.00080229 825.93190214909 830.434172053739 130.67 0.84238 130.67 130.27 131.11 0 311 57 7 0 0 0 3.0373E-14 3 87220 128.17 127.42 1 1.1652 1.2738 0 35811000 15388000 20423000 30916 1689 11745 12066 48187;48188;48189 48187 SFLLDLLNATGK 12 1 0 Unmodified _SFLLDLLNATGK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.8695 2 646.366453 1290.71835 NaN NaN NaN 0.21398 0.00013831 NaN NaN NaN NaN 128.51 0.49799 128.51 128.3 128.79 0 0 0 0 0.011031 1 83696 65.5 23.521 1 NaN NaN 0 11930000 11930000 0 30917 522 11746 12067 48190 48190 SFLLDLLNATGK 12 1 0 Unmodified _SFLLDLLNATGK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.3756 2 646.366453 1290.71835 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.86 1 128.86 128.36 129.36 0 0 0 0 0.0010164 1 84050 73.067 19.897 1 30918 522 11746 12067 48191 48191 SFLLDLLNATGK 12 1 0 Unmodified _SFLLDLLNATGK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.9924 2 646.366453 1290.71835 75449.02 1.0861 0.000702 -0.10762 -6.956E-05 0.97845 0.00063244 646.366324846713 650.373324389713 128.1 0.54539 128.1 127.85 128.4 1.5259E-05 220 32 9 0 0 0 0.0065183 1 85708 72.006 72.006 1 1.4841 1.5686 0 35578000 14109000 21469000 30919 522 11746 12067 48192 48192 SFLVASVLPGPDGNINSPTR 20 0 1 Unmodified _SFLVASVLPGPDGNINSPTR_ 0 0 0 Q7Z3K3;B4DSK8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1021.0399 2 1021.03928 2040.064 62289.95 0.4716 0.00048152 0.13728 0.00014017 0.60888 0.00062169 1021.54115149186 1026.54470565692 114.76 0.40314 114.76 114.57 114.98 -7.6294E-06 120 26 6 0 0 0 2.8025E-24 1 72905 136.99 136.99 1 0.6254 0.65584 0 12205000 6759500 5445800 30920 1874 11747 12068 48193 48193 SFLVASVLPGPDGNINSPTR 20 0 1 Unmodified _SFLVASVLPGPDGNINSPTR_ 0 0 0 Q7Z3K3;B4DSK8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1021.0418 2 1021.03928 2040.064 61260.35 0.49626 0.0005067 0.12431 0.00012692 0.62056 0.00063362 1021.03950429325 1026.04382580364 114.24 0.39751 114.24 114.06 114.45 0 140 27 7 0 0 0 4.6038E-06 1 74311 58.32 58.32 1 0.59156 0.58386 0 12837000 8124500 4712700 30921 1874 11747 12068 48194 48194 SFMALSQDIQK 11 1 0 Oxidation (M) _SFM(ox)ALSQDIQK_ SFM(1)ALSQDIQK SFM(72.64)ALSQDIQK 0 1 0 E9PLA9;B4DSF8;G3V153;B3KXU8;Q14444 E9PLA9 E9PLA9 CAPRIN1 Caprin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.326 2 642.318645 1282.62274 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.17 1 62.17 61.67 62.67 0 0 0 0 0.00031302 1 35671 72.638 44.896 1 30922 954 11748 12069 48195 48195 772 SFNFYVFPK 9 1 0 Unmodified _SFNFYVFPK_ 0 0 0 O95453 O95453 O95453 PARN Poly(A)-specific ribonuclease PARN MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.8001 2 574.792392 1147.57023 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.26 1 109.26 108.76 109.76 0 0 0 0 0.011714 1 70102 61.999 31.814 1 30923 1426 11749 12070 48196 48196 SFNLPMLMLGGGGYTIR 17 0 1 2 Oxidation (M) _SFNLPM(ox)LM(ox)LGGGGYTIR_ SFNLPM(1)LM(1)LGGGGYTIR SFNLPM(51.21)LM(51.21)LGGGGYTIR 0 2 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5HYD4 Q6IT96 Q6IT96 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 934.966 2 929.963139 1857.91173 NaN NaN NaN -1.547 -0.0014387 NaN NaN NaN NaN 118.9 0.36005 118.9 118.7 119.06 0 0 0 0 0.00086152 1 78286 51.211 37.783 1 NaN NaN 0 9934500 0 9934500 30924 1715 11750 12071 48197 48197 1548;1549 SFNNILAVLQK 11 1 0 Unmodified _SFNNILAVLQK_ 0 0 0 Q9ULI0 Q9ULI0 Q9ULI0 ATAD2B ATPase family AAA domain-containing protein 2B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.8614 2 623.861338 1245.70812 82851.84 1.1309 0.00070552 -0.309 -0.00019277 0.82188 0.00051274 624.362272781674 627.86858250285 115.76 0.34156 115.76 115.59 115.93 0 61 23 4 0 0 0 0.0069453 1 73744 53.493 53.493 1 1.76 1.9354 0 3038100 1536400 1501800 30925 2108 11751 12072 48198 48198 SFPDFPTPGVVFR 13 0 1 Unmodified _SFPDFPTPGVVFR_ 0 0 0 H3BQB1;P07741;H3BQF1;H3BQZ9;H3BSW3;Q12898 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3817 2 733.377352 1464.74015 70743.17 0.80173 0.00058797 -0.11263 -8.2598E-05 0.6891 0.00050537 733.376799248678 738.381452573136 120.22 0.76067 120.22 119.94 120.7 -7.6294E-06 313 54 9 0 0 0 2.8045E-13 2 77335 125.97 125.97 1 2.9348 3.2263 0 54265000 13603000 40662000 30926 1302 11752 12073 48199;48200 48199 SFPDFPTPGVVFR 13 0 1 Unmodified _SFPDFPTPGVVFR_ 0 0 0 H3BQB1;P07741;H3BQF1;H3BQZ9;H3BSW3;Q12898 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3819 2 733.377352 1464.74015 70975.42 0.97014 0.00071148 -0.15523 -0.00011384 0.81491 0.00059764 733.377064751752 738.381331013883 119.73 0.76659 119.73 119.37 120.14 0 305 56 8 0 0 0 6.3966E-05 2 78812 95.573 95.573 1 3.1476 3.6413 0 56726000 13034000 43693000 30927 1302 11752 12073 48201;48202 48201 SFPDFPTPGVVFR 13 0 1 Unmodified _SFPDFPTPGVVFR_ 0 0 0 H3BQB1;P07741;H3BQF1;H3BQZ9;H3BSW3;Q12898 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 738.3821 2 733.377352 1464.74015 71420.7 1.1232 0.00082376 -0.002836 -2.0799E-06 1.1204 0.00082168 733.377511152003 738.381650648354 132.42 0.7323 132.42 132.04 132.77 0 197 33 9 0 0 0 8.4786E-05 2 80525 93.843 93.843 1 1.7945 1.5355 0 8698500 3239200 5459300 30928 1302 11752 12073 48203;48204 48204 SFPDFPTPGVVFR 13 0 1 Unmodified _SFPDFPTPGVVFR_ 0 0 0 H3BQB1;P07741;H3BQF1;H3BQZ9;H3BSW3;Q12898 H3BQB1 H3BQB1 APRT Adenine phosphoribosyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.3824 2 733.377352 1464.74015 71268.54 1.2139 0.00089022 -0.051702 -3.7917E-05 1.1622 0.00085231 733.37723287235 738.381432392707 132.21 0.72626 132.21 131.77 132.5 0 230 31 11 0 0 0 0.0001891 2 79396 71.03 71.03 1 1.8424 1.5132 0 8688900 2997400 5691500 30929 1302 11752 12073 48205;48206 48205 SFPGFQAFCETQGDR 15 0 1 Unmodified _SFPGFQAFCETQGDR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.8817 2 873.880661 1745.74677 66696.9 0.78218 0.00068353 0.014832 1.2961E-05 0.79701 0.00069649 873.880460102208 879.386914717286 98.251 0.57056 98.251 97.925 98.496 7.6294E-06 122 46 4 0 0 0 0.024394 1 59902 29.544 29.544 1 0.76952 0.77194 0 9126600 5466800 3659800 30930 1676 11753 12074 48207 48207 SFPGFQAFCETQGDR 15 0 1 Unmodified _SFPGFQAFCETQGDR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.3818 2 873.880661 1745.74677 67646.13 0.67974 0.00059402 0.13683 0.00011957 0.81657 0.00071359 874.3822011079 878.885379861968 97.47 0.45907 97.47 97.252 97.711 0 149 35 6 0 0 0 0.00074078 2 60872 51.013 47.159 1 0.82188 0.80596 0 13941000 7918100 6023300 30931 1676 11753 12074 48208;48209 48209 SFPGFQAFCETQGDR 15 0 1 Unmodified _SFPGFQAFCETQGDR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 874.3806 2 873.880661 1745.74677 65237.85 0.7213 0.00063033 -0.27129 -0.00023707 0.45001 0.00039326 873.880440310223 879.386220425569 110.83 0.51613 110.83 110.62 111.13 0 122 21 8 0 0 0 0.00066869 2 64034 52.555 51.817 1 0.92129 0.7895 0 6116700 3118600 2998100 30932 1676 11753 12074 48210;48211 48211 SFPGFQAFCETQGDR 15 0 1 Unmodified _SFPGFQAFCETQGDR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73;K7EJ37 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 878.8866 2 873.880661 1745.74677 65807.4 0.40362 0.00035272 0.18456 0.00016128 0.58818 0.000514 874.382210995631 879.386831798883 110.74 0.5006 110.74 110.51 111.01 -7.6294E-06 147 25 8 0 0 0 0.0031794 2 63074 42.809 42.809 1 0.93581 0.77805 0 7516700 3959100 3557600 30933 1676 11753 12074 48212;48213 48213 SFQGPVLIGSSHGGVNIEDVAAETPEAIIK 30 1 0 Unmodified _SFQGPVLIGSSHGGVNIEDVAAETPEAIIK_ 0 0 0 B7ZAF6;E5KS55;B7Z9S6;B4DY87;Q7Z503 B7ZAF6 B7ZAF6 SUCLA2 Succinyl-CoA ligase subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1012.5286 3 1012.52765 3034.56113 61135.53 0.33401 0.00033819 -0.16192 -0.00016395 0.17209 0.00017424 1012.86168638219 1015.53278023762 131.38 0.32222 131.38 131.2 131.53 0 83 13 10 0 0 0 0.00034917 2 79721 27.363 27.363 1 0.76767 0.60862 0 4287400 2018800 2268600 30934 1109 11754 12075 48214;48215 48214 SFQQSSLSR 9 0 1 Unmodified _SFQQSSLSR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;D6R8Z5;Q68E03;D6RB45;A0A1B0GX04;D6R9F3;D6RBS2;D6RCM3;D6REK4 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686L22104 Matrin-3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.2617 2 520.261988 1038.50942 NaN NaN NaN 1.1258 0.00058572 NaN NaN NaN NaN 25.867 0.57296 25.867 25.695 26.268 0 0 0 0 8.1393E-05 1 11391 101.64 30.731 1 NaN NaN 0 33692000 33692000 0 30935 542 11755 12076 48216 48216 SFQQSSLSR 9 0 1 Unmodified _SFQQSSLSR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;D6R8Z5;Q68E03;D6RB45;A0A1B0GX04;D6R9F3;D6RBS2;D6RCM3;D6REK4 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686L22104 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.2622 2 520.261988 1038.50942 83090.39 0.71409 0.00037151 0.48559 0.00025263 1.1997 0.00062415 520.262865612717 525.266013766335 25.557 0.51829 25.557 25.417 25.935 -1.9073E-06 89 31 7 0 0 0 0.00033619 2 11195 101.64 89.055 1 0.80688 0.93862 0 62126000 33323000 28803000 30936 542 11755 12076 48217;48218 48218 SFQSDDSSLR 10 0 1 Unmodified _SFQSDDSSLR_ 0 0 0 Q6P0N0;G5E9K5 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.2593 2 571.259642 1140.50473 NaN NaN NaN -1.0613 -0.00060626 NaN NaN NaN NaN 28.409 0.25442 28.409 28.286 28.541 0 0 0 0 0.00010339 1 13581 96.331 57.539 1 NaN NaN 0 9867200 9867200 0 30937 1849 11756 12077 48219 48219 SFSTASAITPSVSR 14 0 1 Unmodified _SFSTASAITPSVSR_ 0 0 0 CON__P13647;P13647;B4E1T1;F8VV57 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.8657 2 705.864805 1409.71506 NaN NaN NaN 0.64355 0.00045426 NaN NaN NaN NaN 77.238 0.70354 77.238 76.938 77.641 0 0 0 0 0.0020149 1 41220 67.153 48.373 1 NaN NaN 0 3885500 3885500 0 + 30938 1162 11757 12078 48220 48220 SFSTLFLETVK 11 1 0 Unmodified _SFSTLFLETVK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.3482 2 636.347729 1270.6809 76495.8 0.86946 0.00055328 0.42694 0.00027168 1.2964 0.00082496 636.348205763406 640.355065524996 113.92 0.61753 113.92 113.59 114.21 0 204 44 6 0 0 0 7.4243E-05 2 72058 98.249 98.249 1 0.73829 0.74922 0 13496000 7926400 5569400 30939 1681 11758 12079 48221;48222 48222 SFSTLFLETVK 11 1 0 Unmodified _SFSTLFLETVK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3481 2 636.347729 1270.6809 76391.8 0.63473 0.00040391 0.29706 0.00018903 0.93178 0.00059294 636.34819635959 640.354953749504 113.16 0.70148 113.16 112.8 113.5 0 197 47 6 0 0 0 9.0028E-05 2 73273 97.565 97.565 1 0.76051 0.78739 0 18664000 11489000 7175100 30940 1681 11758 12079 48223;48224 48223 SFSTLFLETVK 11 1 0 Unmodified _SFSTLFLETVK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3557 2 636.347729 1270.6809 75770.34 0.71789 0.00045683 0.43702 0.0002781 1.1549 0.00073493 636.347701737451 640.355114438285 125.34 0.64725 125.34 125.09 125.74 -7.6294E-06 130 24 8 0 0 0 0.0095143 2 75188 49.35 49.35 1 1.3719 1.0926 0 6738000 2798400 3939600 30941 1681 11758 12079 48225;48226 48225 SFSTLFLETVK 11 1 0 Unmodified _SFSTLFLETVK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.3558 2 636.347729 1270.6809 76427.1 0.79382 0.00050515 0.37035 0.00023567 1.1642 0.00074082 636.347684918822 640.355097915624 125.1 0.72754 125.1 124.83 125.56 -7.6294E-06 151 31 8 0 0 0 0.0082766 2 74085 51.092 49.35 1 1.4187 1.1546 0 7186500 2699700 4486800 30942 1681 11758 12079 48227;48228 48227 SFSYQLEALK 10 1 0 Unmodified _SFSYQLEALK_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7ELR5;Q8IXW9;K7EQS0;K7EPT1;K7ERC1;K7ELT3 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.3105 2 593.311146 1184.60774 79800.96 0.75748 0.00044942 -0.20304 -0.00012046 0.55444 0.00032896 593.310785462517 597.31811761866 85.741 0.63766 85.741 85.328 85.966 0 181 51 5 0 0 0 0.003373 1 51547 76.679 53.608 1 1.2403 1.3005 0 15221000 7267400 7953700 30943 260 11759 12080 48229 48229 SFSYQLEALK 10 1 0 Unmodified _SFSYQLEALK_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7ELR5;Q8IXW9;K7EQS0;K7EPT1;K7ERC1;K7ELT3 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.3189 2 593.311146 1184.60774 79857.3 0.57599 0.00034174 0.14237 8.4471E-05 0.71836 0.00042621 593.311169807176 597.318209891814 98.356 0.76314 98.356 97.961 98.725 0 164 47 5 0 0 0 0.019099 1 55345 47.187 40.569 1 1.7344 1.352 0 3308500 1372800 1935700 30944 260 11759 12080 48230 48230 SFSYQLEALK 10 1 0 Unmodified _SFSYQLEALK_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7ELR5;Q8IXW9;K7EQS0;K7EPT1;K7ERC1;K7ELT3 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.3174 2 593.311146 1184.60774 80329.87 0.6534 0.00038767 -0.27358 -0.00016232 0.37982 0.00022535 593.31099332541 597.317984283701 98.185 0.87646 98.185 97.782 98.658 0 182 53 5 0 0 0 0.020901 1 54410 46.462 41.115 1 1.6423 1.2905 0 3291300 1022500 2268700 30945 260 11759 12080 48231 48231 SFTASVDR 8 0 1 Unmodified _SFTASVDR_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.7191 2 441.719424 881.424296 NaN NaN NaN 0.0092444 4.0834E-06 NaN NaN NaN NaN 29.444 0.32312 29.444 29.291 29.614 0 0 0 0 0.0057496 1 14263 87.251 54.468 1 NaN NaN 0 17305000 17305000 0 30946 2042 11760 12081 48232 48232 SFTASVDR 8 0 1 Unmodified _SFTASVDR_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.7189 2 441.719424 881.424296 96298.06 -0.29019 -0.00012818 0.41064 0.00018139 0.12045 5.3204E-05 441.719175116479 446.723778932393 29.011 0.28909 29.011 28.807 29.096 0 70 24 4 0 0 0 0.02421 1 13889 56.014 23.544 1 0.72274 0.72426 0 18896000 8364600 10531000 30947 2042 11760 12081 48233 48233 SFTASVDRK 9 1 1 Unmodified _SFTASVDRK_ 0 0 1 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.7789 2 505.766906 1009.51926 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.093 1 21.093 20.593 21.593 0 0 0 0 0.0034659 1 7438 96.668 64.733 1 30948 2042 11761 12082 48234 48234 SFTASVDRK 9 1 1 Unmodified _SFTASVDRK_ 0 0 1 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.7679 2 505.766906 1009.51926 83263.97 0.11844 5.9902E-05 0.49304 0.00024936 0.61147 0.00030926 505.767112337789 514.778354204911 20.946 0.44576 20.946 20.665 21.111 0 78 18 8 0 0 0 3.7737E-05 2 7148 116.05 100.2 1 0.87583 1.0257 0 54084000 30021000 24062000 30949 2042 11761 12082 48235;48236 48236 SFTASVDRK 9 1 1 Unmodified _SFTASVDRK_ 0 0 1 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.778 2 505.766906 1009.51926 84405.41 0.16468 8.329E-05 0.38158 0.00019299 0.54626 0.00027628 505.767045237791 514.778043874125 22.762 0.43561 22.762 22.597 23.032 0 84 17 7 0 0 0 0.0019821 1 7428 88.819 76.463 1 1.188 1.0312 0 17449000 7374200 10075000 30950 2042 11761 12082 48237 48237 SFTGNFVIDENILK 14 1 0 Unmodified _SFTGNFVIDENILK_ 0 0 0 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.9174 2 798.917038 1595.81952 69487.94 0.9001 0.0007191 2.1761 0.0017385 3.0762 0.0024576 798.916853802595 802.924351603117 115.48 0.66132 115.48 115.23 115.89 0 193 44 7 0 0 0 0.00021536 1 73449 67.153 60.913 1 2.0029 2.0479 0 14326000 4360500 9965100 30951 70 11762 12083 48238 48238 SFTGNFVIDENILK 14 1 0 Unmodified _SFTGNFVIDENILK_ 0 0 0 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.9169 2 798.917038 1595.81952 67963.26 0.97069 0.0007755 3.186 0.0025453 4.1567 0.0033208 798.916927301366 802.924358270499 114.93 0.68909 114.93 114.7 115.39 0 177 44 8 0 0 0 0.00014827 1 74825 77.062 67.109 1 2.39 2.5571 0 23031000 5924600 17106000 30952 70 11762 12083 48239 48239 SFTGNFVIDENILK 14 1 0 Unmodified _SFTGNFVIDENILK_ 0 0 0 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 802.9244 2 798.917038 1595.81952 68095.43 0.63151 0.00050452 0.1117 8.9243E-05 0.74321 0.00059376 798.917031584953 803.426978416015 127.12 0.56432 127.12 126.92 127.48 0 64 24 4 0 0 0 0.0077175 1 76645 39.917 34.819 1 1.1771 0.94553 0 2845300 1440100 1405200 30953 70 11762 12083 48240 48240 SFTGNFVIDENILK 14 1 0 Unmodified _SFTGNFVIDENILK_ 0 0 0 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.426 2 798.917038 1595.81952 68423.87 0.60895 0.0004865 0.52024 0.00041563 1.1292 0.00090213 799.417740309374 802.924174884517 126.95 0.39847 126.95 126.79 127.19 0 73 18 6 0 0 0 0.032814 1 75600 30.331 27.01 1 1.0278 0.83826 0 4653000 2210800 2442200 30954 70 11762 12083 48241 48241 SFTPDHVVYAR 11 0 1 Unmodified _SFTPDHVVYAR_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.5559 3 431.219172 1290.63569 92857.28 0.063837 2.7528E-05 0.021165 9.1267E-06 0.085002 3.6655E-05 431.219241578058 434.555206932127 48.48 0.68139 48.48 48.201 48.882 0 253 52 8 0 0 0 0.0083573 1 26372 67.334 64.147 1 0.93027 1.034 0 74042000 37670000 36372000 30955 1017 11763 12084 48242 48242 SFTPDHVVYAR 11 0 1 Unmodified _SFTPDHVVYAR_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.3267 2 646.325119 1290.63569 74454.73 0.85922 0.00055534 0.096668 6.2479E-05 0.95589 0.00061782 646.32500425954 651.329145606052 48.53 0.78159 48.53 48.22 49.002 3.8147E-06 160 51 6 0 0 0 0.00011853 2 26378 96.331 80.702 1 1.5006 1.5352 0 32614000 13475000 19138000 30956 1017 11763 12084 48243;48244 48243 SFTPDHVVYAR 11 0 1 Unmodified _SFTPDHVVYAR_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.5547 3 431.219172 1290.63569 90499.74 0.098272 4.2377E-05 0.32359 0.00013954 0.42186 0.00018191 431.21983350723 434.55505037728 46.846 0.56361 46.846 46.572 47.136 0 247 49 8 0 0 0 0.00034413 1 25900 77.379 66.166 1 0.84361 0.98088 0 62616000 36611000 26005000 30957 1017 11763 12084 48245 48245 SFTPDHVVYAR 11 0 1 Unmodified _SFTPDHVVYAR_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3256 2 646.325119 1290.63569 NaN NaN NaN -0.14024 -9.0644E-05 NaN NaN NaN NaN 46.849 0.32646 46.849 46.674 47 0 0 0 0 0.0013489 1 25903 83.948 50.151 1 NaN NaN 0 11964000 11964000 0 30958 1017 11763 12084 48246 48246 SFTPDHVVYAR 11 0 1 Unmodified _SFTPDHVVYAR_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 434.5552 3 431.219172 1290.63569 90708.98 -0.14498 -6.2519E-05 0.13673 5.8959E-05 -0.008257 -3.5606E-06 431.219333559234 434.555220356357 55.506 0.51076 55.506 55.277 55.788 0 172 31 8 0 0 0 0.011529 1 27816 28.903 27.596 1 0.73349 0.62659 0 5764500 3477600 2286900 30959 1017 11763 12084 48247 48247 SFVDAEVDVTR 11 0 1 Unmodified _SFVDAEVDVTR_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.3118 2 619.306592 1236.59863 76331.16 0.71015 0.0004398 -0.28851 -0.00017867 0.42164 0.00026113 619.306431882078 624.310778309064 73.931 0.76057 73.931 73.54 74.301 0 228 69 4 0 0 0 0.00060448 1 43264 73.887 65.704 1 1.4857 1.5123 0 27318000 10790000 16528000 30960 1851 11764 12085 48248 48248 SFVDAEVDVTR 11 0 1 Unmodified _SFVDAEVDVTR_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3049 2 619.306592 1236.59863 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.575 1 73.575 73.075 74.075 0 0 0 0 0.029327 1 43157 49.3 28.971 1 30961 1851 11764 12085 48249 48249 SFVDAEVDVTR 11 0 1 Unmodified _SFVDAEVDVTR_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.3099 2 619.306592 1236.59863 76719.07 0.61269 0.00037944 -0.13633 -8.4429E-05 0.47636 0.00029501 620.309298937722 624.310926995636 72.922 1.1089 72.922 72.439 73.547 0 488 96 10 0 0 0 0.0005685 2 43542 74.162 66.682 1 1.5012 1.6994 0 47827000 17770000 30057000 30962 1851 11764 12085 48250;48251 48250 SFVEFILEPLYK 12 1 0 Unmodified _SFVEFILEPLYK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.9059 2 742.905411 1483.79627 70078.95 0.67313 0.00050007 0.39568 0.00029395 1.0688 0.00079402 742.905532532729 746.912760454123 133.49 0.19879 133.49 133.39 133.59 0 16 4 7 0 0 0 0.00022137 2 87506 88.681 83.582 1 1.0085 1.086 0 40769000 20226000 20543000 30963 794 11765 12086 48252;48253 48253 SFVIDHQR 8 0 1 Unmodified _SFVIDHQR_ 0 0 0 A0A024R277;O15269;Q6NUL7 A0A024R277 A0A024R277 SPTLC1 Serine palmitoyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2665 2 501.261791 1000.50903 88452.45 0.30551 0.00015314 0.69703 0.0003494 1.0025 0.00050254 501.763934707019 506.265965346083 26.808 0.33868 26.808 26.555 26.893 1.9073E-06 61 22 4 0 0 0 0.022432 1 12149 57.177 46.71 1 0.96697 1.0116 0 10778000 6068800 4709600 30964 107 11766 12087 48254 48254 SFVIDHQR 8 0 1 Unmodified _SFVIDHQR_ 0 0 0 A0A024R277;O15269;Q6NUL7 A0A024R277 A0A024R277 SPTLC1 Serine palmitoyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.267 2 501.261791 1000.50903 88833.81 0.34922 0.00017505 -0.13828 -6.9317E-05 0.21093 0.00010573 501.261473034009 506.26588954734 26.189 0.31068 26.189 26.063 26.374 0 40 15 4 0 0 0 0.030566 1 11663 51.854 44.164 1 0.6837 0.69116 0 9783500 5629900 4153600 30965 107 11766 12087 48255 48255 SFVLNLGK 8 1 0 Unmodified _SFVLNLGK_ 0 0 0 P09382 P09382 P09382 LGALS1 Galectin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.2676 2 439.260728 876.506903 92275.66 0.35538 0.0001561 -0.26563 -0.00011668 0.089751 3.9424E-05 439.26073523565 443.267550533857 84.332 0.51958 84.332 84.06 84.58 7.6294E-06 111 39 4 0 0 0 0.013226 2 50474 65.803 42.784 1 6.1696 6.6414 0 38301000 4649700 33652000 30966 1460 11767 12088 48256;48257 48256 SFVLNLGK 8 1 0 Unmodified _SFVLNLGK_ 0 0 0 P09382 P09382 P09382 LGALS1 Galectin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.2679 2 439.260728 876.506903 NaN NaN NaN 0.20787 9.1307E-05 NaN NaN NaN NaN 83.245 0.57957 83.245 82.936 83.516 0 0 0 0 0.0079089 1 50853 81.297 48.826 1 NaN NaN 0 26597000 0 26597000 30967 1460 11767 12088 48258 48258 SFVSSNWAETPR 12 0 1 Unmodified _SFVSSNWAETPR_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2;Q3B7X0 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.8306 2 690.830766 1379.64698 76112.73 0.63992 0.00044208 0.27251 0.00018826 0.91243 0.00063033 690.830830790383 695.835260742972 84.604 0.37973 84.604 84.408 84.787 0 64 26 4 0 0 0 0.037481 1 45401 34.692 34.248 1 1.0086 0.87278 0 1762100 608730 1153300 30968 873 11768 12089 48259 48259 SFYPEEVSSMVLTK 14 1 0 Oxidation (M) _SFYPEEVSSM(ox)VLTK_ SFYPEEVSSM(1)VLTK SFYPEEVSSM(107.85)VLTK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.9031 2 816.894914 1631.77527 67563.23 0.90486 0.00073917 -0.086933 -7.1015E-05 0.81792 0.00066816 816.8948283278 820.902014025657 92.22 0.7662 92.22 91.893 92.659 0 349 74 6 0 0 0 7.9463E-07 2 55751 107.85 107.85 1 1.8903 2.0657 0 51107000 15572000 35536000 30969 1467;1248 11769 12090 48260;48261 48260 958 SFYPEEVSSMVLTK 14 1 0 Oxidation (M) _SFYPEEVSSM(ox)VLTK_ SFYPEEVSSM(1)VLTK SFYPEEVSSM(78.9)VLTK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.9027 2 816.894914 1631.77527 67874.4 0.98256 0.00080265 -0.053663 -4.3837E-05 0.9289 0.00075881 816.895135549828 820.901954691597 92.949 0.82982 92.949 92.588 93.418 0 383 71 8 0 0 0 6.6572E-05 2 56220 78.903 75.37 1 2.0659 2.241 0 45189000 14725000 30463000 30970 1467;1248 11769 12090 48262;48263 48262 958 SFYPEEVSSMVLTK 14 1 0 Oxidation (M) _SFYPEEVSSM(ox)VLTK_ SFYPEEVSSM(1)VLTK SFYPEEVSSM(59.2)VLTK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.8951 2 816.894914 1631.77527 67195.1 0.86994 0.00071065 -0.00063772 -5.2095E-07 0.86931 0.00071013 816.894965634776 820.902073159496 91.564 0.76318 91.564 91.192 91.955 7.6294E-06 342 67 7 0 0 0 0.00032302 2 56555 59.198 59.198 1 1.9902 2.2449 0 62894000 21405000 41489000 30971 1467;1248 11769 12090 48264;48265 48265 958 SFYPEEVSSMVLTK 14 1 0 Oxidation (M) _SFYPEEVSSM(ox)VLTK_ SFYPEEVSSM(1)VLTK SFYPEEVSSM(73.63)VLTK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.3979 2 816.894914 1631.77527 67534.22 0.87913 0.00071816 -0.059042 -4.8231E-05 0.82009 0.00066992 816.895135216444 820.901975947403 92.36 0.70316 92.36 91.921 92.624 0 348 60 8 0 0 0 8.2278E-05 2 57072 73.632 73.632 1 2.0779 2.3371 0 72013000 27056000 44956000 30972 1467;1248 11769 12090 48266;48267 48267 958 SFYPEEVSSMVLTK 14 1 0 Oxidation (M) _SFYPEEVSSM(ox)VLTK_ SFYPEEVSSM(1)VLTK SFYPEEVSSM(51.22)VLTK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.9015 2 816.894914 1631.77527 66752.67 0.73178 0.00059779 -0.029185 -2.3841E-05 0.70259 0.00057395 816.894772292354 820.901964485897 105.72 0.59734 105.72 105.51 106.1 7.6294E-06 152 33 6 0 0 0 0.00086429 1 60414 51.218 51.218 1 0.91459 0.73472 0 7890800 4095200 3795600 30973 1467;1248 11769 12090 48268 48268 958 SFYPEEVSSMVLTK 14 1 0 Oxidation (M) _SFYPEEVSSM(ox)VLTK_ SFYPEEVSSM(1)VLTK SFYPEEVSSM(44.3)VLTK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.8958 2 816.894914 1631.77527 67425.63 0.75421 0.00061611 0.01842 1.5047E-05 0.77263 0.00063116 816.895118328064 821.403342894945 106.41 0.65906 106.41 106.06 106.72 0 173 35 8 0 0 0 0.0024821 1 60742 44.299 44.299 1 0.90346 0.72549 0 7969000 3998900 3970100 30974 1467;1248 11769 12090 48269 48269 958 SFYPEEVSSMVLTK 14 1 0 Oxidation (M) _SFYPEEVSSM(ox)VLTK_ SFYPEEVSSM(1)VLTK SFYPEEVSSM(49.35)VLTK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.9016 2 816.894914 1631.77527 67043.02 0.71205 0.00058167 -0.56859 -0.00046448 0.14346 0.00011719 816.893456844113 820.902036456867 105.57 0.82434 105.57 105.04 105.86 0 210 58 6 0 0 0 0.0010334 1 59395 49.35 49.35 1 0.83944 0.68477 0 6413900 3646900 2767000 30975 1467;1248 11769 12090 48270 48270 958 SFYPEEVSSMVLTK 14 1 0 Oxidation (M) _SFYPEEVSSM(ox)VLTK_ SFYPEEVSSM(1)VLTK SFYPEEVSSM(45.92)VLTK 0 1 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 816.8955 2 816.894914 1631.77527 67427.73 0.74673 0.00061 -0.10684 -8.7281E-05 0.63988 0.00052272 816.894872305923 821.403503241466 106.23 0.58289 106.23 105.94 106.53 0 197 34 8 0 0 0 0.0020186 1 59755 45.915 45.915 1 0.89724 0.73824 0 10257000 5529500 4727300 30976 1467;1248 11769 12090 48271 48271 958 SFYPEEVSSMVLTK 14 1 0 Unmodified _SFYPEEVSSMVLTK_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.9048 2 808.897457 1615.78036 NaN NaN NaN -0.53183 -0.00043019 NaN NaN NaN NaN 119.44 0.47814 119.44 119.23 119.71 7.6294E-06 0 0 0 0.0028581 1 70711 64.199 45.887 1 NaN NaN 0 6205100 0 6205100 30977 1467;1248 11769 12091 48272 48272 SFYTAIAQAFLSNEK 15 1 0 Unmodified _SFYTAIAQAFLSNEK_ 0 0 0 E7EMW7;O95071;E5RFK7;E7ET84 E7EMW7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.4341 2 845.42777 1688.84099 68609.44 0.95248 0.00080525 -0.68433 -0.00057855 0.26815 0.0002267 845.928534099487 849.434325050049 127.62 0.3651 127.62 127.45 127.82 0 89 22 6 0 0 0 2.2745E-10 1 85259 119.39 119.39 1 1.1057 1.1278 0 5123800 2137200 2986600 30978 1218 11770 12092 48273 48273 SGAAHLCDSQETNCSTAGHSK 21 1 0 Unmodified _SGAAHLCDSQETNCSTAGHSK_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.986 3 739.979774 2216.91749 69145.57 0.47843 0.00035403 0.34066 0.00025208 0.81909 0.00060611 740.314447436006 742.651679994162 16.622 0.28125 16.622 16.508 16.789 -1.9073E-06 94 16 11 0 0 0 3.9882E-07 2 3308 50.924 50.719 1 1.6013 1.2441 0 3424900 1110700 2314200 30979 260 11771 12093 48274;48275 48274 SGAAHLCDSQETNCSTAGHSK 21 1 0 Unmodified _SGAAHLCDSQETNCSTAGHSK_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.6517 3 739.979774 2216.91749 70063.09 0.27363 0.00020248 0.081957 6.0646E-05 0.35558 0.00026313 739.98002966227 742.985646367504 16.71 0.22389 16.71 16.587 16.811 0 121 17 10 0 0 0 2.6439E-08 2 3059 69.255 69.248 1 1.7885 1.4149 0 3186800 1128200 2058600 30980 260 11771 12093 48276;48277 48277 SGAEVEAGDAAER 13 0 1 Unmodified _SGAEVEAGDAAER_ 0 0 0 A0A087WZ13;E9PAU2;Q8IY67;K7EKR9 A0A087WZ13 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.2907 2 631.286388 1260.55822 NaN NaN NaN 0.54771 0.00034576 NaN NaN NaN NaN 20.895 0.21613 20.895 20.763 20.979 0 0 0 0 0.0033495 1 7301 65.5 47.233 1 NaN NaN 0 2029500 0 2029500 30981 438 11772 12094 48278 48278 SGAHSFISGLPQGYDTEVDEAGSQLSGGQR 30 0 1 Unmodified _SGAHSFISGLPQGYDTEVDEAGSQLSGGQR_ 0 0 0 X5CKB3;B2R9F3;A0A140T9T7;A0A0S2Z5A6;Q03518;B7Z7P4;A0A0S2Z4R8 X5CKB3 X5CKB3 TAP1 Antigen peptide transporter 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1020.813 3 1017.47439 3049.40133 60227.92 0.48781 0.00049633 -0.18461 -0.00018784 0.3032 0.00030849 1017.80855353064 1021.47810864444 110.28 0.28221 110.28 110.14 110.42 0 93 14 10 0 0 0 0.005329 1 63661 22.437 22.437 1 1.2008 1.0195 0 5190000 1957000 3233000 30982 578 11773 12095 48279 48279 SGAIFTK 7 1 0 Unmodified _SGAIFTK_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 362.2046 2 362.205421 722.39629 106847.8 -0.54455 -0.00019724 0.65698 0.00023796 0.11243 4.0722E-05 362.205454669768 366.213036333159 29.257 0.23815 29.257 29.106 29.344 1.9073E-06 47 14 5 0 0 0 0.037329 1 14098 60.895 22.089 1 0.77964 0.81526 0 12099000 6946200 5153100 30983 1601 11774 12096 48280 48280 SGALDVLQMKEEDVLK 16 2 0 Acetyl (Protein N-term),Oxidation (M) _(ac)SGALDVLQM(ox)KEEDVLK_ SGALDVLQM(1)KEEDVLK SGALDVLQM(58.67)KEEDVLK 1 1 1 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.4728 2 916.969142 1831.92373 63517.83 0.93692 0.00085913 -0.89393 -0.00081971 0.042993 3.9423E-05 917.470814954628 924.982376061464 112.1 0.43022 112.1 111.9 112.33 7.6294E-06 127 29 7 0 0 0 5.6469E-05 1 70710 58.674 52.441 1 1.959 2.3299 0 17323000 6066900 11256000 30984 119 11775 12097 48281 48281 103 SGALDVLQMKEEDVLK 16 2 0 Acetyl (Protein N-term),Oxidation (M) _(ac)SGALDVLQM(ox)KEEDVLK_ SGALDVLQM(1)KEEDVLK SGALDVLQM(123.95)KEEDVLK 1 1 1 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;Q96RS2;F8WD59 C9J9K3 C9J9K3 RPSA 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 924.9826 2 916.969142 1831.92373 63219.1 0.80624 0.00073929 -0.72376 -0.00066367 0.082474 7.5626E-05 916.968366001036 924.983016133856 111.59 0.41329 111.59 111.42 111.83 7.6294E-06 125 26 7 0 0 0 1.7046E-13 2 71971 123.95 123.95 1 2.1582 2.473 0 20143000 7031700 13112000 30985 119 11775 12097 48282;48283 48282 103 SGAPPPSGSAVSTAPQPK 18 1 0 Unmodified _SGAPPPSGSAVSTAPQPK_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.4279 2 818.420476 1634.8264 NaN NaN NaN -0.31273 -0.00025594 NaN NaN NaN NaN 31.229 0.58748 31.229 30.94 31.527 0 0 0 0 0.01428 1 15211 40.113 31.159 1 NaN NaN 0 14528000 0 14528000 30986 1988 11776 12098 48284 48284 SGAPPPSGSAVSTAPQPK 18 1 0 Unmodified _SGAPPPSGSAVSTAPQPK_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.4202 2 818.420476 1634.8264 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.01 1 31.01 30.51 31.51 0 0 0 0 0.014864 1 15256 43.382 34.653 1 30987 1988 11776 12098 48285 48285 SGAPPPSGSAVSTAPQPK 18 1 0 Unmodified _SGAPPPSGSAVSTAPQPK_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.424 2 818.420476 1634.8264 67675.56 0.75119 0.00061479 0.035469 2.9028E-05 0.78666 0.00064382 818.421214378415 822.427127115319 30.789 0.66008 30.789 30.328 30.988 -1.9073E-06 175 56 7 0 0 0 6.0976E-06 2 15059 82.925 74.62 1 1.8364 1.9853 0 21953000 9362000 12591000 30988 1988 11776 12098 48286;48287 48287 SGAQASSTPLSPTR 14 0 1 Unmodified _SGAQASSTPLSPTR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.347 2 680.34678 1358.67901 73513.1 0.51534 0.00035061 0.18109 0.0001232 0.69643 0.00047381 680.346632991154 685.351091043266 29.599 0.51796 29.599 29.495 30.013 0 205 44 9 0 0 0 2.1703E-83 2 14327 216.97 182.72 1 1.2687 1.501 0 317670000 136430000 181240000 30989 1440 11777 12099 48288;48289 48289 SGAQASSTPLSPTR 14 0 1 Unmodified _SGAQASSTPLSPTR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.3515 2 680.34678 1358.67901 72842.55 0.94713 0.00064438 -0.14705 -0.00010005 0.80008 0.00054433 680.346421022562 685.350886082455 29.15 0.86726 29.15 29.032 29.9 0 237 63 8 0 0 0 3.7176E-70 2 13981 210.31 210.31 1 1.2793 1.4831 0 304930000 120270000 184660000 30990 1440 11777 12099 48290;48291 48290 SGAQASSTPLSPTR 14 0 1 Unmodified _SGAQASSTPLSPTR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.3503 2 680.34678 1358.67901 74522.39 0.64644 0.0004398 -0.23195 -0.00015781 0.41449 0.000282 680.346626087432 685.350811369968 33.496 0.74874 33.496 33.309 34.058 0 230 64 6 0 0 0 1.5283E-09 2 14624 119.74 119.74 1 1.4591 1.2332 0 30131000 12383000 17748000 30991 1440 11777 12099 48292;48293 48293 SGAQASSTPLSPTR 14 0 1 Unmodified _SGAQASSTPLSPTR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.3475 2 680.34678 1358.67901 74551.63 0.51045 0.00034728 -0.47541 -0.00032344 0.035036 2.3836E-05 680.3466714551 685.350992670108 33.616 0.81969 33.616 33.427 34.247 0 309 69 8 0 0 0 0.0012989 2 14195 54.683 54.683 1 1.5643 1.3645 0 32052000 12767000 19285000 30992 1440 11777 12099 48294;48295 48295 SGASAAPAASAAAALAPSATR 21 0 1 Unmodified _SGASAAPAASAAAALAPSATR_ 0 0 0 A0A0M3HER2 A0A0M3HER2 A0A0M3HER2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.9622 2 885.460664 1768.90677 65179.89 0.72564 0.00064252 -0.20097 -0.00017795 0.52466 0.00046457 885.460288246309 890.46469922244 73.897 0.57175 73.897 73.573 74.145 0 256 53 6 0 0 0 3.2105E-12 3 43436 99.566 99.566 1 1.2209 1.2451 0 30575000 14802000 15773000 30993 541 11778 12100 48296;48297;48298 48298 SGASAAPAASAAAALAPSATR 21 0 1 Unmodified _SGASAAPAASAAAALAPSATR_ 0 0 0 A0A0M3HER2 A0A0M3HER2 A0A0M3HER2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.462 2 885.460664 1768.90677 65199.37 0.55086 0.00048776 -0.15123 -0.00013391 0.39963 0.00035386 885.961985939101 890.464483138932 72.806 0.50855 72.806 72.52 73.028 0 232 43 7 0 0 0 4.6751E-16 4 43577 110.84 110.84 1 1.1391 1.2451 0 36116000 17398000 18718000 30994 541 11778 12100 48299;48300;48301;48302 48301 SGASAAPAASAAAALAPSATR 21 0 1 Unmodified _SGASAAPAASAAAALAPSATR_ 0 0 0 A0A0M3HER2 A0A0M3HER2 A0A0M3HER2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 890.9673 2 885.460664 1768.90677 64260.79 0.44315 0.00039239 -0.10411 -9.2184E-05 0.33904 0.00030021 885.460748970245 890.464767811373 84.661 0.57986 84.661 84.407 84.987 -7.6294E-06 250 42 8 0 0 0 1.2522E-07 2 46148 65.374 65.374 1 1.5964 1.3688 0 8555400 3225400 5330000 30995 541 11778 12100 48303;48304 48303 SGASAAPAASAAAALAPSATR 21 0 1 Unmodified _SGASAAPAASAAAALAPSATR_ 0 0 0 A0A0M3HER2 A0A0M3HER2 A0A0M3HER2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 890.4659 2 885.460664 1768.90677 64472.24 0.33516 0.00029677 0.21305 0.00018865 0.54822 0.00048542 885.46077946494 890.465012381427 84.867 0.63297 84.867 84.546 85.179 0 240 44 7 0 0 0 7.3926E-11 2 45495 88.73 88.73 1 1.7295 1.4289 0 8133200 2898000 5235200 30996 541 11778 12100 48305;48306 48305 SGASEANLIVAK 12 1 0 Unmodified _SGASEANLIVAK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.327 2 580.319502 1158.62445 78945.88 0.64881 0.00037652 0.20128 0.0001168 0.85009 0.00049332 580.319539771696 584.326676612606 51.399 1.0684 51.399 51.059 52.127 3.8147E-06 492 94 8 0 0 0 0.00023662 2 28298 86.189 61.413 1 1.7155 2.0335 0 476940000 169570000 307370000 30997 1569;1864 11779 12101 48307;48308 48307 SGASEANLIVAK 12 1 0 Unmodified _SGASEANLIVAK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3273 2 580.319502 1158.62445 78883.37 0.63663 0.00036945 -0.10686 -6.2015E-05 0.52977 0.00030743 580.319417120643 584.326526305695 50.134 0.88233 50.134 49.784 50.666 3.8147E-06 465 79 8 0 0 0 6.1558E-31 3 28186 175.65 132.56 1 1.7099 2.0074 0 344020000 115770000 228250000 30998 1569;1864 11779 12101 48309;48310;48311 48310 SGASEANLIVAK 12 1 0 Unmodified _SGASEANLIVAK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.3268 2 580.319502 1158.62445 79638.66 0.37364 0.00021683 0.20086 0.00011656 0.5745 0.00033339 580.319757880813 584.32668315105 59.259 1.3711 59.259 58.845 60.216 0 572 100 10 0 0 0 7.1376E-13 3 30057 133.23 99.964 1 3.1569 2.7071 0 78264000 18420000 59845000 30999 1569;1864 11779 12101 48312;48313;48314 48312 SGASEANLIVAK 12 1 0 Unmodified _SGASEANLIVAK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.3269 2 580.319502 1158.62445 78969.01 0.37707 0.00021882 0.30885 0.00017923 0.68592 0.00039805 580.319898929382 584.326712051951 59.727 1.3003 59.727 59.212 60.513 0 590 99 10 0 0 0 5.6382E-08 2 29694 112.71 88.192 1 3.1027 2.6163 0 54547000 13721000 40826000 31000 1569;1864 11779 12101 48315;48316 48315 SGASGASAAPAASAAAALAPSATR 24 0 1 Unmodified _SGASGASAAPAASAAAALAPSATR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 993.5073 2 993.005967 1983.99738 61496.73 0.37918 0.00037652 -0.0039856 -3.9578E-06 0.37519 0.00037257 993.506991721241 998.010241438103 75.993 0.58896 75.993 75.709 76.298 7.6294E-06 278 48 8 0 0 0 3.6453E-27 2 44690 118.47 113.49 1 1.2841 1.4214 0 61485000 28661000 32824000 31001 1882 11780 12102 48317;48318 48318 SGASGASAAPAASAAAALAPSATR 24 0 1 Unmodified _SGASGASAAPAASAAAALAPSATR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 993.5073 2 993.005967 1983.99738 61315.51 0.23508 0.00023343 0.034616 3.4374E-05 0.26969 0.00026781 993.50703411832 998.010163447849 75.054 0.59064 75.054 74.753 75.343 0 329 52 8 0 0 0 6.779E-16 3 45094 95.428 95.428 1 1.2767 1.4813 0 58552000 26686000 31866000 31002 1882 11780 12102 48319;48320;48321 48321 SGASGASAAPAASAAAALAPSATR 24 0 1 Unmodified _SGASGASAAPAASAAAALAPSATR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 998.0106 2 993.005967 1983.99738 NaN NaN NaN 0.36816 0.00036558 NaN NaN NaN NaN 87.37 0.78462 87.37 86.901 87.686 0 0 0 0 2.7519E-09 1 47931 65.943 50.741 1 NaN NaN 0 10424000 0 10424000 31003 1882 11780 12102 48322 48322 SGASGASAAPAASAAAALAPSATR 24 0 1 Unmodified _SGASGASAAPAASAAAALAPSATR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 998.0093 2 993.005967 1983.99738 NaN NaN NaN 0.67213 0.00066743 NaN NaN NaN NaN 87.465 0.70156 87.465 87.069 87.771 0 0 0 0 0.0067201 1 47147 32.302 18.874 1 NaN NaN 0 11732000 0 11732000 31004 1882 11780 12102 48323 48323 SGASVVAIR 9 0 1 Unmodified _SGASVVAIR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.2538 2 430.253434 858.492316 91241.2 -0.21961 -9.4488E-05 0.079019 3.3998E-05 -0.14059 -6.049E-05 430.253404334589 435.257501364379 39.674 0.90296 39.674 39.337 40.24 0 377 75 8 0 0 0 0.0020595 2 20495 77.318 40.158 1 0.76709 0.90732 0 292880000 165500000 127380000 31005 1817 11781 12103 48324;48325 48324 SGASVVAIR 9 0 1 Unmodified _SGASVVAIR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.2531 2 430.253434 858.492316 91657.22 -0.21628 -9.3054E-05 0.1394 5.9975E-05 -0.076883 -3.3079E-05 430.253471970931 435.257450271827 38.679 0.87019 38.679 38.303 39.173 0 333 74 8 0 0 0 1.59E-05 2 20277 121.74 70.846 1 0.72985 0.85036 0 456310000 260770000 195540000 31006 1817 11781 12103 48326;48327 48326 SGASVVAIR 9 0 1 Unmodified _SGASVVAIR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 430.2536 2 430.253434 858.492316 91737.09 -0.19074 -8.2068E-05 0.15495 6.6667E-05 -0.035795 -1.5401E-05 430.25345625863 435.257455268777 44.848 0.99918 44.848 44.487 45.486 0 374 75 9 0 0 0 0.022351 2 21248 49.097 27.694 1 0.84939 0.72451 0 37091000 20398000 16693000 31007 1817 11781 12103 48328;48329 48329 SGASVVAIR 9 0 1 Unmodified _SGASVVAIR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 435.2574 2 430.253434 858.492316 92159.43 0.017691 7.6114E-06 0.053326 2.2944E-05 0.071017 3.0555E-05 430.253406808526 435.257390281851 44.764 0.87454 44.764 44.406 45.281 3.8147E-06 349 63 9 0 0 0 0.0036023 2 20656 71.379 45.485 1 0.88326 0.77048 0 27277000 14426000 12851000 31008 1817 11781 12103 48330;48331 48331 SGAVEETFR 9 0 1 Unmodified _SGAVEETFR_ 0 0 0 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.2474 2 498.243264 994.471974 87792.67 0.23456 0.00011687 0.096452 4.8056E-05 0.33101 0.00016492 498.24331205864 503.247498793287 32.651 0.33189 32.651 32.443 32.775 0 76 28 4 0 0 0 0.001292 2 16177 87.308 50.188 1 2.4847 2.6045 0 12344000 3255900 9087700 31009 70 11782 12104 48332;48333 48332 SGAYLIPLLER 11 0 1 Unmodified _SGAYLIPLLER_ 0 0 0 B2R858;P26196;Q8IV96 B2R858 B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.3593 2 616.355888 1230.69722 NaN NaN NaN 0.02663 1.6414E-05 NaN NaN NaN NaN 114.96 0.54137 114.96 114.6 115.14 0 0 0 0 0.0099794 1 72987 59.153 50.689 1 NaN NaN 0 4054800 0 4054800 31010 860 11783 12105 48334 48334 SGDAAIVDMVPGK 13 1 0 Oxidation (M) _SGDAAIVDM(ox)VPGK_ SGDAAIVDM(1)VPGK SGDAAIVDM(122.51)VPGK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.3245 2 638.316103 1274.61765 74999.93 0.734 0.00046852 -0.035571 -2.2705E-05 0.69843 0.00044582 638.316080675192 642.323216036556 54.282 0.64557 54.282 53.901 54.546 0 286 52 7 0 0 0 1.3294E-09 2 30322 122.51 103.19 1 2.3111 2.6606 0 209150000 64587000 144570000 31011 1658;1790 11784 12106 48335;48336 48336 1440 SGDAAIVDMVPGK 13 1 0 Oxidation (M) _SGDAAIVDM(ox)VPGK_ SGDAAIVDM(1)VPGK SGDAAIVDM(121.9)VPGK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.3234 2 638.316103 1274.61765 74641.98 0.46492 0.00029677 0.352 0.00022468 0.81692 0.00052145 638.316349406419 642.323530129605 54.722 0.64419 54.722 54.462 55.106 -3.8147E-06 333 61 8 0 0 0 1.6184E-09 1 30820 121.9 105.23 1 2.3929 2.6964 0 126300000 35743000 90553000 31012 1658;1790 11784 12106 48337 48337 1440 SGDAAIVDMVPGK 13 1 0 Oxidation (M) _SGDAAIVDM(ox)VPGK_ SGDAAIVDM(1)VPGK SGDAAIVDM(106.62)VPGK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3231 2 638.316103 1274.61765 75184.51 0.096104 6.1345E-05 0.1813 0.00011573 0.27741 0.00017707 638.316197882307 642.323371038747 53.235 0.81338 53.235 52.796 53.609 0 400 74 7 0 0 0 2.3326E-06 2 30375 106.62 89.901 1 2.3908 2.6727 0 103610000 30531000 73081000 31013 1658;1790 11784 12106 48338;48339 48339 1440 SGDAAIVDMVPGK 13 1 0 Oxidation (M) _SGDAAIVDM(ox)VPGK_ SGDAAIVDM(1)VPGK SGDAAIVDM(149.23)VPGK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3235 2 638.316103 1274.61765 75223.36 0.58335 0.00037236 0.04438 2.8329E-05 0.62773 0.00040069 638.316063455873 642.323341609647 53.854 0.85736 53.854 53.518 54.375 0 420 80 8 0 0 0 7.5419E-20 2 30784 149.23 135.54 1 2.2838 2.6383 0 195270000 62867000 132400000 31014 1658;1790 11784 12106 48340;48341 48340 1440 SGDAAIVDMVPGK 13 1 0 Oxidation (M) _SGDAAIVDM(ox)VPGK_ SGDAAIVDM(1)VPGK SGDAAIVDM(63.62)VPGK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.3243 2 638.316103 1274.61765 75419.48 0.27669 0.00017662 -1.0854 -0.00069286 -0.80875 -0.00051624 638.314802084427 642.323343218394 63.73 0.7347 63.73 63.337 64.072 3.8147E-06 245 63 7 0 0 0 0.00016546 1 32732 63.624 44.309 1 0.82133 0.64728 0 5599000 2758500 2840600 31015 1658;1790 11784 12106 48342 48342 1440 SGDAAIVDMVPGK 13 1 0 Oxidation (M) _SGDAAIVDM(ox)VPGK_ SGDAAIVDM(1)VPGK SGDAAIVDM(55.31)VPGK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.3159 2 638.316103 1274.61765 NaN NaN NaN 0.13938 8.8969E-05 NaN NaN NaN NaN 62.988 0.43112 62.988 62.699 63.13 3.8147E-06 0 0 0 0.001892 1 32375 55.314 49.774 1 NaN NaN 0 1776600 1776600 0 31016 1658;1790 11784 12106 48343 48343 1440 SGDAAIVDMVPGK 13 1 0 Oxidation (M) _SGDAAIVDM(ox)VPGK_ SGDAAIVDM(1)VPGK SGDAAIVDM(65.5)VPGK 0 1 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.323 2 638.316103 1274.61765 NaN NaN NaN 0.19004 0.00012131 NaN NaN NaN NaN 64.262 0.55896 64.262 63.972 64.531 0 0 0 0 0.0010432 1 32397 65.5 52.147 1 NaN NaN 0 2525700 0 2525700 31017 1658;1790 11784 12106 48344 48344 1440 SGDAAIVDMVPGK 13 1 0 Unmodified _SGDAAIVDMVPGK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;A0A087WV01;Q9H2I7;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.3259 2 630.318645 1258.62274 76738.35 0.55625 0.00035061 -0.0089234 -5.6246E-06 0.54733 0.00034499 630.318104931077 634.325709642206 91.384 0.80492 91.384 90.846 91.651 0 153 55 5 0 0 0 0.013183 1 49979 38.58 34.426 1 2.1912 1.7973 0 5307200 1692900 3614300 31018 1658;1790 11784 12107 48345 48345 SGDAAIVDMVPGKPMCVESFSDYPPLGR 28 1 1 Unmodified _SGDAAIVDMVPGKPMCVESFSDYPPLGR_ 0 0 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q2F837;Q96EB3;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1005.4799 3 999.138126 2994.39255 59295.37 0.46767 0.00046727 -0.65863 -0.00065807 -0.19096 -0.0001908 999.137522394623 1005.47948049117 128.37 0.40889 128.37 128.16 128.57 0 74 16 7 0 0 0 8.5025E-07 2 76631 44.264 41.982 1 3.5365 3.0025 0 3309500 697770 2611700 31019 1658;1790 11785 12108 48346;48347 48347 SGDETPGSEVPGDK 14 1 0 Unmodified _SGDETPGSEVPGDK_ 0 0 0 H3BQZ7;Q1KMD3 H3BQZ7 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.8124 2 687.80461 1373.59467 73907.39 0.28427 0.00019552 -0.53822 -0.00037019 -0.25394 -0.00017466 688.304937730231 691.811630605997 24.949 0.2982 24.949 24.752 25.05 0 56 16 5 0 0 0 0.0075773 2 10561 40.154 40.154 1 1.1719 1.1609 0 9477500 4148500 5329000 31020 1303 11786 12109 48348;48349 48348 SGDETPGSEVPGDK 14 1 0 Unmodified _SGDETPGSEVPGDK_ 0 0 0 H3BQZ7;Q1KMD3 H3BQZ7 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.8112 2 687.80461 1373.59467 74872.97 1.0008 0.00068834 -0.4213 -0.00028977 0.57948 0.00039857 687.804381134505 691.811440459165 24.708 0.32077 24.708 24.514 24.835 1.9073E-06 59 15 7 0 0 0 0.0012105 2 10356 55.314 55.314 1 1.1809 1.2142 0 9529800 4327900 5201900 31021 1303 11786 12109 48350;48351 48350 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term) _(ac)SGDHLHNDSQIEADFR_ 1 0 0 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.6182 3 628.281999 1881.82417 76132.64 0.67792 0.00042592 -0.034392 -2.1608E-05 0.64353 0.00040432 628.282036487695 631.618074799306 55.797 1.2404 55.797 55.32 56.56 0 705 102 10 0 0 0 7.7926E-58 3 31211 159.69 159.69 1 1.1269 1.3357 0 523830000 248780000 275050000 31022 1470 11787 12110 48352;48353;48354 48353 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term) _(ac)SGDHLHNDSQIEADFR_ 1 0 0 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.4219 2 941.91936 1881.82417 62866.76 0.6139 0.00057824 0.45506 0.00042863 1.069 0.0010069 941.919659549263 947.425422979375 55.829 0.54452 55.829 55.506 56.05 0 200 39 6 0 0 0 0.00026034 1 31242 72.705 66.981 1 1.2098 1.3401 0 63349000 29344000 34005000 31023 1470 11787 12110 48355 48355 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term) _(ac)SGDHLHNDSQIEADFR_ 1 0 0 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 947.4249 2 941.91936 1881.82417 NaN NaN NaN -0.16572 -0.00015609 NaN NaN NaN NaN 55.486 0.030228 55.486 55.467 55.497 0 0 0 0 2.773E-14 1 31199 118.24 104.33 1 NaN NaN 0 5384100 0 5384100 31024 1470 11787 12110 48356 48356 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term) _(ac)SGDHLHNDSQIEADFR_ 1 0 0 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.6187 3 628.281999 1881.82417 76093.79 0.90624 0.00056938 -0.37681 -0.00023674 0.52944 0.00033264 628.281882974502 631.617863884285 54.573 0.90125 54.573 54.251 55.153 0 619 74 12 0 0 0 2.8937E-25 3 31098 114.63 109.92 1 1.1595 1.3634 0 957320000 453990000 503340000 31025 1470 11787 12110 48357;48358;48359 48358 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term) _(ac)SGDHLHNDSQIEADFR_ 1 0 0 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 946.9229 2 941.91936 1881.82417 63277.7 0.87614 0.00082526 -0.10811 -0.00010183 0.76804 0.00072343 942.420554246307 946.923468594539 54.55 0.50654 54.55 54.36 54.866 -3.8147E-06 263 41 9 0 0 0 7.8453E-10 2 31091 112.42 106.7 1 1.1331 1.2987 0 83016000 37612000 45404000 31026 1470 11787 12110 48360;48361 48360 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term) _(ac)SGDHLHNDSQIEADFR_ 1 0 0 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.618 3 628.281999 1881.82417 75523.04 0.70175 0.0004409 -0.3696 -0.00023221 0.33215 0.00020869 628.282391970031 631.618096246237 65.441 1.5297 65.441 65.08 66.609 0 748 103 14 0 0 0 3.5533E-05 2 33904 66.289 66.289 1 1.725 1.5021 0 351780000 133660000 218120000 31027 1470 11787 12110 48362;48363 48363 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term) _(ac)SGDHLHNDSQIEADFR_ 1 0 0 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 628.2817 3 628.281999 1881.82417 76318.09 0.462 0.00029027 -0.24473 -0.00015376 0.21727 0.00013651 628.282520210488 631.61817227363 65.979 1.455 65.979 65.597 67.052 0 758 100 15 0 0 0 0.00010331 1 33253 40.515 40.457 1 1.6695 1.4585 0 267640000 98663000 168970000 31028 1470 11787 12110 48364 48364 SGDSEVYQLGDVSQK 15 1 0 Unmodified _SGDSEVYQLGDVSQK_ 0 0 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.3798 2 806.378474 1610.74239 67733.61 0.56181 0.00045303 0.21424 0.00017276 0.77605 0.00062579 806.378563072723 810.385837834266 62.7 0.76067 62.7 62.437 63.198 0 435 73 9 0 0 0 3.3416E-22 2 35873 146.36 146.36 1 0.81939 0.92493 0 109310000 57652000 51659000 31029 666 11788 12111 48365;48366 48365 SGDSEVYQLGDVSQK 15 1 0 Unmodified _SGDSEVYQLGDVSQK_ 0 0 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.889 2 806.378474 1610.74239 67151.03 0.56243 0.00045353 0.15617 0.00012593 0.7186 0.00057946 806.378588715891 810.385854428267 61.793 0.92024 61.793 61.304 62.224 0 509 84 8 0 0 0 1.5451E-10 3 35961 121.29 121.29 1 0.79832 0.89209 0 94153000 53953000 40199000 31030 666 11788 12111 48367;48368;48369 48367 SGDSEVYQLGDVSQK 15 1 0 Unmodified _SGDSEVYQLGDVSQK_ 0 0 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 806.8809 2 806.378474 1610.74239 67997.64 0.52267 0.00042147 0.40304 0.000325 0.92571 0.00074647 806.378682316037 810.386162909321 72.672 1.0218 72.672 72.064 73.086 0 416 74 9 0 0 0 0.00021959 2 38195 63.091 63.091 1 0.71998 0.57365 0 19744000 11520000 8224400 31031 666 11788 12111 48370;48371 48370 SGDSEVYQLGDVSQK 15 1 0 Unmodified _SGDSEVYQLGDVSQK_ 0 0 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 810.3851 2 806.378474 1610.74239 66843.63 0.51016 0.00041138 0.17906 0.00014439 0.68921 0.00055576 806.378569990408 810.385754499348 73.35 0.86828 73.35 72.84 73.708 0 386 61 9 0 0 0 0.00022308 2 37830 68.515 68.515 1 0.71993 0.57742 0 18889000 10808000 8081000 31032 666 11788 12111 48372;48373 48373 SGEEDEEILFK 11 1 0 Unmodified _SGEEDEEILFK_ 0 0 0 P49792;Q5JC46;Q5JC45 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3096 2 648.303715 1294.59288 76046.41 0.55021 0.0003567 -0.83324 -0.00054019 -0.28303 -0.00018349 648.30277327524 652.309973889468 75.019 0.45289 75.019 74.841 75.293 0 92 39 4 0 0 0 0.00033089 1 45182 86.898 78.366 1 1.581 1.6147 0 11988000 4929300 7058600 31033 1588 11789 12112 48374 48374 SGEGEVSGLMR 11 0 1 Oxidation (M) _SGEGEVSGLM(ox)R_ SGEGEVSGLM(1)R SGEGEVSGLM(76.57)R 0 1 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.2681 2 569.26387 1136.51319 78883.68 0.55065 0.00031346 -0.69523 -0.00039577 -0.14458 -8.2307E-05 569.263811806439 574.267664701159 27.857 0.44566 27.858 27.646 28.092 1.9073E-06 146 30 7 0 0 0 0.00022407 2 13096 76.572 69.092 1 2.3784 2.5911 0 51277000 15340000 35938000 31034 862 11790 12113 48375;48376 48376 674 SGEGEVSGLMR 11 0 1 Oxidation (M) _SGEGEVSGLM(ox)R_ SGEGEVSGLM(1)R SGEGEVSGLM(117.01)R 0 1 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.2642 2 569.26387 1136.51319 80668.77 0.37462 0.00021326 -0.5877 -0.00033456 -0.21308 -0.0001213 569.263740854033 574.267684540779 27.395 0.38993 27.395 27.186 27.576 0 98 20 7 0 0 0 2.553E-08 1 12674 117.01 109.79 1 2.0933 2.4279 0 65316000 21574000 43742000 31035 862 11790 12113 48377 48377 674 SGEGIREPISVK 12 1 1 Unmodified _SGEGIREPISVK_ 0 0 1 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3522 2 636.351334 1270.68811 77409.33 0.61111 0.00038888 -0.030571 -1.9454E-05 0.58054 0.00036943 636.35142248771 645.362361668933 39.286 0.55234 39.286 39.083 39.635 3.8147E-06 146 47 5 0 0 0 0.0022295 1 20698 71.349 31.348 1 0.64151 0.74224 0 32909000 19323000 13586000 31036 655 11791 12114 48378 48378 SGELAQEYDK 10 1 0 Unmodified _SGELAQEYDK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;Q68EN4;H0Y7K8;Q5H934;Q7Z4C6 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.2716 2 570.264393 1138.51423 80381.67 0.57262 0.00032655 -0.023046 -1.3142E-05 0.54958 0.0003134 570.264352080582 574.271552940786 27.188 0.60119 27.188 26.978 27.579 0 76 32 4 0 0 0 6.3498E-12 2 12461 143.03 98.685 1 0.95886 1.0117 0 15506000 7733100 7772700 31037 1739 11792 12115 48379;48380 48380 SGELAQEYDK 10 1 0 Unmodified _SGELAQEYDK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;Q68EN4;H0Y7K8;Q5H934;Q7Z4C6 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.2637 2 570.264393 1138.51423 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.728 1 26.728 26.228 27.228 0 0 0 0 4.0027E-08 1 12113 125.97 83.682 1 31038 1739 11792 12115 48381 48381 SGELAQEYDK 10 1 0 Unmodified _SGELAQEYDK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;Q68EN4;H0Y7K8;Q5H934;Q7Z4C6 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.2713 2 570.264393 1138.51423 80790.24 0.36487 0.00020807 0.29339 0.00016731 0.65826 0.00037538 570.264634462791 574.271444652338 30.859 0.39654 30.859 30.673 31.07 0 96 23 6 0 0 0 0.026231 2 12939 44.318 25.73 1 1.4671 1.141 0 3389700 1521000 1868800 31039 1739 11792 12115 48382;48383 48383 SGFGEISSPVIR 12 0 1 Unmodified _SGFGEISSPVIR_ 0 0 0 P57740;G3V1T4 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.8382 2 624.832777 1247.651 NaN NaN NaN 0.64027 0.00040006 NaN NaN NaN NaN 84.747 0.4893 84.747 84.46 84.95 0 0 0 0 0.0022413 1 50805 68.893 50.631 1 NaN NaN 0 7610400 0 7610400 31040 1621 11793 12116 48384 48384 SGFGEISSPVIR 12 0 1 Unmodified _SGFGEISSPVIR_ 0 0 0 P57740;G3V1T4 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.3387 2 624.832777 1247.651 NaN NaN NaN -0.29093 -0.00018178 NaN NaN NaN NaN 83.744 0.53032 83.744 83.437 83.967 0 0 0 0 0.0063368 1 51431 60.518 38.432 1 NaN NaN 0 7618500 0 7618500 31041 1621 11793 12116 48385 48385 SGFGEISSPVIR 12 0 1 Unmodified _SGFGEISSPVIR_ 0 0 0 P57740;G3V1T4 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.8388 2 624.832777 1247.651 78097.28 0.82375 0.00051471 0.61873 0.00038661 1.4425 0.00090131 624.832849677971 629.837522293641 97.136 0.65749 97.136 96.777 97.435 -7.6294E-06 114 32 6 0 0 0 0.01966 1 54650 39.918 35.619 1 1.5109 1.31 0 2067600 637460 1430100 31042 1621 11793 12116 48386 48386 SGFLAAR 7 0 1 Unmodified _SGFLAAR_ 0 0 0 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 361.2032 2 361.203213 720.391873 NaN NaN NaN 0.328 0.00011847 NaN NaN NaN NaN 36.044 0.23896 36.044 35.853 36.092 0 0 0 0 0.031701 1 18482 72.355 20.452 1 NaN NaN 0 15292000 15292000 0 31043 2038 11794 12117 48387 48387 SGFLVWR 7 0 1 Unmodified _SGFLVWR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.7401 2 432.739963 863.465373 NaN NaN NaN 0.202 8.7414E-05 NaN NaN NaN NaN 91.984 0.43027 91.984 91.804 92.234 0 0 0 0 0.041109 1 55688 62.714 32.139 1 NaN NaN 0 3436000 3436000 0 31044 406 11795 12118 48388 48388 SGFLVWR 7 0 1 Unmodified _SGFLVWR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 432.7411 2 432.739963 863.465373 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.841 1 90.841 90.341 91.341 -7.6294E-06 0 0 0 0.013509 1 56207 84.359 53.784 1 31045 406 11795 12118 48389 48389 SGFNLEELEK 10 1 0 Unmodified _SGFNLEELEK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.2975 2 583.290411 1164.56627 79787.97 0.77552 0.00045235 -0.15512 -9.048E-05 0.6204 0.00036187 583.2903557048 587.297267244514 86.577 0.86687 86.577 86.231 87.098 0 351 62 7 0 0 0 5.9897E-10 2 52085 135.43 114.48 1 0.80639 0.91031 0 136250000 71954000 64297000 31046 125 11796 12119 48390;48391 48390 SGFNLEELEK 10 1 0 Unmodified _SGFNLEELEK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.2974 2 583.290411 1164.56627 79751.56 0.82528 0.00048138 -0.19238 -0.00011221 0.6329 0.00036917 583.290286166767 587.297296962623 85.715 0.908 85.715 85.202 86.11 0 264 69 7 0 0 0 6.5496E-08 1 52600 112.71 94.172 1 0.86009 0.96138 0 100190000 51188000 49007000 31047 125 11796 12119 48392 48392 SGFNLEELEK 10 1 0 Unmodified _SGFNLEELEK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.2903 2 583.290411 1164.56627 NaN NaN NaN 0.31817 0.00018559 NaN NaN NaN NaN 85.397 0.31079 85.397 85.215 85.526 0 0 0 0 1.0106E-12 1 52599 130.66 99.919 1 NaN NaN 0 46003000 46003000 0 31048 125 11796 12119 48393 48393 SGFNLEELEK 10 1 0 Unmodified _SGFNLEELEK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.2977 2 583.290411 1164.56627 79841.15 0.55833 0.00032567 0.05671 3.3078E-05 0.61504 0.00035875 583.290465580431 587.297481579834 99.31 1.0432 99.31 99.061 100.1 0 322 65 8 0 0 0 0.00012061 4 56050 96.665 96.665 1 1.1695 0.93146 0 19663000 9265000 10398000 31049 125 11796 12119 48394;48395;48396;48397 48394 SGFNLEELEK 10 1 0 Unmodified _SGFNLEELEK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.2906 2 583.290411 1164.56627 80125.03 0.43911 0.00025613 0.24254 0.00014147 0.68165 0.0003976 583.290642784631 587.297608045427 99.214 1.0992 99.214 98.968 100.07 0 359 85 8 0 0 0 0.00172 3 55201 72.365 72.365 1 1.1328 0.91025 0 16283000 7121200 9161700 31050 125 11796 12119 48398;48399;48400 48399 SGGEQAQDWDALPPK 15 1 0 Unmodified _SGGEQAQDWDALPPK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.8835 2 799.875901 1597.73725 67680.23 0.88147 0.00070507 0.24804 0.0001984 1.1295 0.00090346 799.876059319495 803.882946313027 68.19 1.0564 68.19 67.535 68.592 0 252 92 5 0 0 0 5.1139E-06 2 39576 121.02 121.02 1 0.96542 0.97593 0 18326000 9059900 9266400 31051 759 11797 12120 48401;48402 48402 SGGEQAQDWDALPPK 15 1 0 Unmodified _SGGEQAQDWDALPPK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.8839 2 799.875901 1597.73725 67869.66 0.63432 0.00050738 0.15234 0.00012185 0.78666 0.00062923 799.87590905237 804.384347183556 67.164 1.2255 67.164 66.298 67.523 7.6294E-06 271 101 4 0 0 0 6.0946E-07 3 39790 126.34 118.21 1 0.91505 0.98583 0 21687000 10011000 11676000 31052 759 11797 12120 48403;48404;48405 48405 SGGEQAQDWDALPPK 15 1 0 Unmodified _SGGEQAQDWDALPPK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.8767 2 799.875901 1597.73725 NaN NaN NaN -0.17683 -0.00014144 NaN NaN NaN NaN 66.594 0.24667 66.594 66.402 66.649 -7.6294E-06 0 0 0 0.039085 1 39252 38.875 31.901 1 NaN NaN 0 4315000 4315000 0 31053 759 11797 12120 48406 48406 SGGEQAQDWDALPPK 15 1 0 Unmodified _SGGEQAQDWDALPPK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.8765 2 799.875901 1597.73725 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.212 1 67.212 66.712 67.712 0 0 0 0 3.1728E-11 1 39789 110.31 97.214 1 31054 759 11797 12120 48407 48407 SGGEQAQDWDALPPK 15 1 0 Unmodified _SGGEQAQDWDALPPK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.8835 2 799.875901 1597.73725 68512.86 0.53413 0.00042724 0.29878 0.00023899 0.83291 0.00066623 800.377454413059 803.883175845681 78.258 2.2388 78.258 77.135 79.374 0 598 146 6 0 0 0 0.029633 2 41841 38.769 38.769 1 1.5052 1.1922 0 6305100 2442800 3862300 31055 759 11797 12120 48408;48409 48408 SGGEQAQDWDALPPK 15 1 0 Unmodified _SGGEQAQDWDALPPK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.8754 2 799.875901 1597.73725 67590.52 0.54047 0.00043231 0.17198 0.00013757 0.71245 0.00056987 799.875863743028 803.883181225027 78.647 2.2727 78.647 77.472 79.745 0 629 145 6 0 0 0 0.0023099 2 41323 45.28 42.057 1 1.457 1.1949 0 5318400 2160800 3157600 31056 759 11797 12120 48410;48411 48410 SGGFQSMGLSYPVFK 15 1 0 Oxidation (M) _SGGFQSM(ox)GLSYPVFK_ SGGFQSM(1)GLSYPVFK SGGFQSM(50.21)GLSYPVFK 0 1 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.9302 2 810.889966 1619.76538 67786.66 1.2192 0.00098868 -0.11464 -9.2957E-05 1.1046 0.00089572 810.889879837276 814.897261666554 96.463 0.58627 96.463 96.086 96.672 0 246 51 6 0 0 0 0.011706 1 58594 50.207 50.207 1 1.1354 1.1851 0 29895000 16780000 13115000 31057 1933 11798 12121 48412 48412 1772 SGGFQSMGLSYPVFK 15 1 0 Oxidation (M) _SGGFQSM(ox)GLSYPVFK_ SGGFQSM(1)GLSYPVFK SGGFQSM(78.69)GLSYPVFK 0 1 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.8981 2 810.889966 1619.76538 66986.92 1.0903 0.00088412 -0.5708 -0.00046285 0.51952 0.00042127 810.88968413627 814.89674163613 95.621 0.58202 95.621 95.319 95.901 7.6294E-06 258 47 7 0 0 0 7.8731E-05 2 59429 78.692 78.692 1 1.224 1.2416 0 29630000 13226000 16404000 31058 1933 11798 12121 48413;48414 48413 1772 SGGFQSMGLSYPVFK 15 1 0 Oxidation (M) _SGGFQSM(ox)GLSYPVFK_ SGGFQSM(1)GLSYPVFK SGGFQSM(45.92)GLSYPVFK 0 1 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 810.8894 2 810.889966 1619.76538 NaN NaN NaN -0.58188 -0.00047184 NaN NaN NaN NaN 109.47 0.53809 109.47 109.25 109.78 -7.6294E-06 0 0 0 0.0049388 1 63065 45.915 39.226 1 NaN NaN 0 3587400 3587400 0 31059 1933 11798 12121 48415 48415 1772 SGGGFGPDPGSGTTVPAR 18 0 1 Unmodified _SGGGFGPDPGSGTTVPAR_ 0 0 0 Q9H4L4 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.892 2 808.8868 1615.75905 NaN NaN NaN 0.2568 0.00020773 NaN NaN NaN NaN 53.254 0.28391 53.254 53.097 53.381 0 0 0 0 0.003132 1 29672 50.088 43.2 1 NaN NaN 0 7342100 0 7342100 31060 2031 11799 12122 48416 48416 SGGGFGPDPGSGTTVPAR 18 0 1 Unmodified _SGGGFGPDPGSGTTVPAR_ 0 0 0 Q9H4L4 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.8909 2 808.8868 1615.75905 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.192 1 52.192 51.692 52.692 0 0 0 0 0.00041013 1 29712 58.32 48.665 1 31061 2031 11799 12122 48417 48417 SGGGFSSGSAGIINYQR 17 0 1 Unmodified _SGGGFSSGSAGIINYQR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.4006 2 829.400075 1656.7856 NaN NaN NaN 0.22625 0.00018765 NaN NaN NaN NaN 69.778 1.1075 69.778 69.338 70.446 0 0 0 0 2.1804E-19 2 40794 160.15 152.77 1 NaN NaN 0 68708000 68708000 0 + 31062 1308;1309 11800 12123 48418;48419 48419 SGGGFSSGSAGIINYQR 17 0 1 Unmodified _SGGGFSSGSAGIINYQR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.3988 2 829.400075 1656.7856 NaN NaN NaN 0.033787 2.8023E-05 NaN NaN NaN NaN 68.745 1.1523 68.745 68.258 69.41 0 0 0 0 0.00037033 2 40606 85.845 79.742 1 NaN NaN 0 85498000 85498000 0 + 31063 1308;1309 11800 12123 48420;48421 48420 SGGGFSSGSAGIINYQR 17 0 1 Unmodified _SGGGFSSGSAGIINYQR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.8931 2 829.400075 1656.7856 NaN NaN NaN 0.13746 0.00011401 NaN NaN NaN NaN 80.332 0.77191 80.332 80.016 80.788 0 0 0 0 0.016237 1 42375 53.252 47.149 1 NaN NaN 0 23398000 23398000 0 + 31064 1308;1309 11800 12123 48422 48422 SGGGGGGGGCGGGGGVSSLR 20 0 1 Unmodified _SGGGGGGGGCGGGGGVSSLR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.3422 2 775.342234 1548.66992 NaN NaN NaN -0.083843 -6.5007E-05 NaN NaN NaN NaN 23.566 0.31465 23.566 23.414 23.728 0 0 0 0 5.9516E-54 1 9435 159.18 148.94 1 NaN NaN 0 20178000 20178000 0 + 31065 1161 11801 12124 48423 48423 SGGGGGGGGCGGGGGVSSLR 20 0 1 Unmodified _SGGGGGGGGCGGGGGVSSLR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.3431 2 775.342234 1548.66992 NaN NaN NaN -0.45627 -0.00035376 NaN NaN NaN NaN 23.355 0.28982 23.355 23.224 23.514 0 0 0 0 2.8104E-81 1 9220 183 166.37 1 NaN NaN 0 13156000 13156000 0 + 31066 1161 11801 12124 48424 48424 SGGGGGGGGCGGGGGVSSLR 20 0 1 Unmodified _SGGGGGGGGCGGGGGVSSLR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.3427 2 775.342234 1548.66992 NaN NaN NaN -0.11882 -9.2124E-05 NaN NaN NaN NaN 25.984 0.50419 25.984 25.786 26.29 0 0 0 0 0.0014115 1 9604 43.791 27.9 1 NaN NaN 0 17972000 17972000 0 + 31067 1161 11801 12124 48425 48425 SGGGGGGGGCGGGGGVSSLR 20 0 1 Unmodified _SGGGGGGGGCGGGGGVSSLR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.3428 2 775.342234 1548.66992 NaN NaN NaN -0.1421 -0.00011018 NaN NaN NaN NaN 26.015 0.52827 26.015 25.843 26.371 0 0 0 0 9.9674E-14 1 9160 99.796 87.583 1 NaN NaN 0 11254000 11254000 0 + 31068 1161 11801 12124 48426 48426 SGGGGGGGLGSGGSIR 16 0 1 Unmodified _SGGGGGGGLGSGGSIR_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.8029 2 616.80254 1231.59053 76198.48 0.21224 0.00013091 0.0062104 3.8306E-06 0.21845 0.00013474 616.802688337991 621.81018190172 24.525 0.83587 24.525 24.248 25.084 0 169 37 8 0 0 0 6.1382E-57 1 10150 183.79 183.79 1 0.017833 0.020824 0 545460000 535630000 9834100 + 31069 1165 11802 12125 48427 48427 SGGGVLEERPLTLYR 15 0 2 Unmodified _SGGGVLEERPLTLYR_ 0 0 1 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.6404 3 549.633533 1645.87877 81829.74 0.66394 0.00036492 -0.43525 -0.00023923 0.22869 0.0001257 549.633546301026 556.305292743918 88.988 0.43058 88.988 88.764 89.195 0 116 28 5 0 0 0 0.0051008 1 49092 34.909 34.909 1 3.8314 3.3896 0 4027500 946550 3081000 31070 1984 11803 12126 48428 48428 SGGGVLEERPLTLYR 15 0 2 Unmodified _SGGGVLEERPLTLYR_ 0 0 1 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.3061 3 549.633533 1645.87877 82666.67 0.3821 0.00021001 0.026046 1.4316E-05 0.40814 0.00022433 549.633594278226 556.305599440998 88.802 0.4666 88.802 88.537 89.004 0 107 30 5 0 0 0 0.00051756 1 48178 37.583 27.834 1 4.1181 3.7213 0 2928800 575640 2353100 31071 1984 11803 12126 48429 48429 SGGIETIANEYSDR 14 0 1 Unmodified _SGGIETIANEYSDR_ 0 0 0 B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96 B3KNM0 B3KNM0 HSPA4L Heat shock 70 kDa protein 4L ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.356 2 756.352259 1510.68997 NaN NaN NaN -1.1128 -0.00084165 NaN NaN NaN NaN 69.72 0.29476 69.72 69.533 69.828 0 0 0 0 0.00030436 1 40446 81.017 62.705 1 NaN NaN 0 7190700 0 7190700 31072 624 11804 12127 48430 48430 SGGIPALVR 9 0 1 Unmodified _SGGIPALVR_ 0 0 0 B4DE59;C9JTX4;C9J826;C9JK18;C9JKY1;A0A0S2Z487;A0A024R1X8;P14923 B4DE59;A0A0S2Z487 B4DE59 JUP Junction plakoglobin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.2642 2 435.263802 868.513051 94736.76 0.037243 1.621E-05 -0.78062 -0.00033978 -0.74338 -0.00032357 435.263808954773 440.266597565759 63.609 0.57348 63.609 63.328 63.901 0 126 50 3 0 0 0 0.037915 1 37376 42.869 26.725 1 0.5191 0.51559 0 8744200 4724900 4019300 31073 964;94 11805 12128 48431 48431 SGGLGGSHALLLLR 14 0 1 Unmodified _SGGLGGSHALLLLR_ 0 0 0 E5KNY5;P42704;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.8962 2 675.896243 1349.77793 79837.13 0.94534 0.00063895 -0.23838 -0.00016112 0.70696 0.00047783 675.89624059216 680.900163413169 84.67 0.72341 84.67 84.271 84.994 0 129 59 5 0 0 0 0.025929 1 50676 31.431 22.109 1 2.1862 2.2478 0 14224000 4859100 9365200 31074 1207 11806 12129 48432 48432 SGGLGGSHALLLLR 14 0 1 Unmodified _SGGLGGSHALLLLR_ 0 0 0 E5KNY5;P42704;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.269 3 450.933254 1349.77793 NaN NaN NaN -0.46508 -0.00020972 NaN NaN NaN NaN 84.609 0.57491 84.609 84.522 85.097 0 0 0 0 5.8466E-05 1 50706 85.457 62.231 1 NaN NaN 0 15697000 0 15697000 31075 1207 11806 12129 48433 48433 SGGLGGSHALLLLR 14 0 1 Unmodified _SGGLGGSHALLLLR_ 0 0 0 E5KNY5;P42704;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.9332 3 450.933254 1349.77793 91886.36 0.17027 7.678E-05 0.02325 1.0484E-05 0.19352 8.7265E-05 450.933013305919 454.269337825758 82.289 0.85064 82.289 81.899 82.75 0 163 73 5 0 0 0 0.00029408 1 50406 57.136 57.136 1 1.8678 1.8725 0 17995000 6000300 11995000 31076 1207 11806 12129 48434 48434 SGGLGGSHALLLLR 14 0 1 Unmodified _SGGLGGSHALLLLR_ 0 0 0 E5KNY5;P42704;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 450.9331 3 450.933254 1349.77793 90166.84 0.36023 0.00016244 -0.31884 -0.00014377 0.041393 1.8666E-05 450.933099563781 454.269197523264 95.794 0.44104 95.794 95.567 96.008 0 110 31 5 0 0 0 0.0086471 1 53690 31.664 31.664 1 1.1446 0.96696 0 2994200 1462700 1531500 31077 1207 11806 12129 48435 48435 SGGLGGSHALLLLR 14 0 1 Unmodified _SGGLGGSHALLLLR_ 0 0 0 E5KNY5;P42704;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 454.2693 3 450.933254 1349.77793 92214.8 -0.00087742 -3.9566E-07 0.070398 3.1745E-05 0.06952 3.1349E-05 450.933230329294 454.269362647184 95.297 0.37175 95.297 95.157 95.528 7.6294E-06 76 26 5 0 0 0 0.023086 2 52583 22.991 22.991 1 1.1687 1.0345 0 2416900 1226600 1190300 31078 1207 11806 12129 48436;48437 48437 SGGLQTPECLSR 12 0 1 Unmodified _SGGLQTPECLSR_ 0 0 0 B4DY33;A4D1Z4;P85037 B4DY33 B4DY33 KIAA0415;FOXK1 Forkhead box protein K1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.8209 2 652.816801 1303.61905 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.496 1 48.496 47.996 48.996 0 0 0 0 0.015866 1 26442 53.756 32.979 1 31079 667 11807 12130 48438 48438 SGGMSNELNNIISR 14 0 1 Oxidation (M) _SGGM(ox)SNELNNIISR_ SGGM(1)SNELNNIISR SGGM(79.82)SNELNNIISR 0 1 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;Q8N9C4 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.3656 2 754.362104 1506.70965 NaN NaN NaN -0.31967 -0.00024115 NaN NaN NaN NaN 67.888 0.32201 67.888 67.702 68.024 0 0 0 0 0.00012194 1 39258 79.82 68.601 1 NaN NaN 0 4466800 0 4466800 31080 89 11808 12131 48439 48439 84 SGGMSNELNNIISR 14 0 1 Oxidation (M) _SGGM(ox)SNELNNIISR_ SGGM(1)SNELNNIISR SGGM(97.21)SNELNNIISR 0 1 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;Q8N9C4 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.3658 2 754.362104 1506.70965 NaN NaN NaN 0.67319 0.00050783 NaN NaN NaN NaN 66.754 0.30083 66.754 66.602 66.903 0 0 0 0 1.2092E-06 1 39453 97.214 85.483 1 NaN NaN 0 5837400 0 5837400 31081 89 11808 12131 48440 48440 84 SGGNEVSIEER 11 0 1 Unmodified _SGGNEVSIEER_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.7833 2 588.778199 1175.54184 78670.43 0.54419 0.00032041 0.27563 0.00016229 0.81982 0.00048269 588.77831921315 593.782416514495 27.555 0.56121 27.555 27.295 27.857 0 205 35 8 0 0 0 2.8596E-31 1 12640 185.08 169.93 1 0.97623 1.0885 0 84160000 40467000 43693000 31082 1752 11809 12132 48441 48441 SGGNEVSIEER 11 0 1 Unmodified _SGGNEVSIEER_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.7836 2 588.778199 1175.54184 79795.4 0.68052 0.00040067 0.496 0.00029203 1.1765 0.00069271 588.778465679703 593.782624329018 27.047 0.69454 27.047 26.767 27.461 0 156 34 8 0 0 0 7.656E-31 1 12321 179.42 164.27 1 0.97154 1.1072 0 102140000 49183000 52959000 31083 1752 11809 12132 48442 48442 SGGNEVSIEER 11 0 1 Unmodified _SGGNEVSIEER_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.7825 2 588.778199 1175.54184 78309.3 0.38581 0.00022715 0.16144 9.5051E-05 0.54724 0.00032221 588.778327585098 593.782345262765 31.317 0.64312 31.317 31 31.643 0 241 40 8 0 0 0 0.000913 2 13089 71.524 62.167 1 1.2343 1.0376 0 26891000 12317000 14575000 31084 1752 11809 12132 48443;48444 48443 SGGNEVSIEER 11 0 1 Unmodified _SGGNEVSIEER_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.7826 2 588.778199 1175.54184 78881.45 0.49261 0.00029004 -0.20326 -0.00011968 0.28935 0.00017036 588.778181944277 593.782127874267 31.35 0.6817 31.35 31.095 31.777 1.9073E-06 195 34 9 0 0 0 7.5008E-08 2 12708 113.44 98.294 1 1.3118 1.1399 0 24372000 10081000 14290000 31085 1752 11809 12132 48445;48446 48446 SGGPVVVLVQLER 13 0 1 Unmodified _SGGPVVVLVQLER_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.899 2 676.898451 1351.78235 77224.55 0.54956 0.000372 -0.19101 -0.0001293 0.35855 0.0002427 676.898077817879 681.902572165621 120.54 0.2617 120.54 120.36 120.62 0 41 11 4 0 0 0 0.0081175 1 71556 44.299 40.767 1 0.79099 0.67209 0 2875000 1774300 1100800 31086 1411 11810 12133 48447 48447 SGGPVVVLVQLEREEEVTGPVIAPLFPQK 29 1 1 Unmodified _SGGPVVVLVQLEREEEVTGPVIAPLFPQK_ 0 0 1 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1030.5743 3 1029.90781 3086.70159 NaN NaN NaN -0.34036 -0.00035054 NaN NaN NaN NaN 133.37 0.13849 133.37 133.29 133.43 0 0 0 0 0.00097388 1 87354 39.823 33.247 1 NaN NaN 0 23902000 23902000 0 31087 1411 11811 12134 48448 48448 SGGSGHAVAEPASPEQELDQNK 22 1 0 Unmodified _SGGSGHAVAEPASPEQELDQNK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.6829 3 736.676966 2207.00907 71732.52 0.69027 0.00050851 -0.024782 -1.8256E-05 0.66549 0.00049025 737.01163054271 739.348350479267 40.549 0.50606 40.549 40.297 40.803 0 154 45 6 0 0 0 1.3041E-08 1 21219 70.121 69.36 1 2.4698 2.4268 0 20187000 4696600 15491000 31088 1569 11812 12135 48449 48449 SGGSGHAVAEPASPEQELDQNK 22 1 0 Unmodified _SGGSGHAVAEPASPEQELDQNK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.6768 3 736.676966 2207.00907 71383.85 0.40688 0.00029974 -0.15537 -0.00011446 0.25152 0.00018529 737.01112664087 739.682730713194 47.579 0.70131 47.579 47.194 47.896 3.8147E-06 254 50 9 0 0 0 1.5355E-05 2 23054 41.45 40.846 1 4.0927 3.282 0 7512200 1432800 6079500 31089 1569 11812 12135 48450;48451 48451 SGGSGHAVAEPASPEQELDQNK 22 1 0 Unmodified _SGGSGHAVAEPASPEQELDQNK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.0115 3 736.676966 2207.00907 71396.17 0.34954 0.0002575 0.061256 4.5126E-05 0.4108 0.00030262 737.011150160369 739.682717558718 47.891 0.54433 47.891 47.617 48.161 0 212 43 7 0 0 0 5.7135E-05 2 22723 36.663 36.359 1 3.6848 3.0167 0 4899800 1506000 3393900 31090 1569 11812 12135 48452;48453 48453 SGGTALHVAAAK 12 1 0 Unmodified _SGGTALHVAAAK_ 0 0 0 F8VZN8;A0A024RBF1;B2RAH5;O14974;F8VW28;H0YHL8 F8VZN8 F8VZN8 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.8086 2 541.80128 1081.58801 NaN NaN NaN -0.019544 -1.0589E-05 NaN NaN NaN NaN 22.036 0.2815 22.036 21.86 22.141 0 0 0 0 0.0022453 1 8210 68.847 59.664 1 NaN NaN 0 8807000 0 8807000 31091 336 11813 12136 48454 48454 SGGTEGLLAEK 11 1 0 Unmodified _SGGTEGLLAEK_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.2842 2 531.277303 1060.54005 83085.23 0.13169 6.9961E-05 0.090948 4.8319E-05 0.22263 0.00011828 531.276961991542 535.28465346474 46.553 0.50677 46.553 46.291 46.798 3.8147E-06 81 27 4 0 0 0 0.017682 1 21874 51.531 33.905 1 1.3975 1.0961 0 2064000 929970 1134000 31092 2101 11814 12137 48455 48455 SGGVGGSNTNWK 12 1 0 Unmodified _SGGVGGSNTNWK_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.2824 2 582.275626 1162.5367 77591.01 0.23798 0.00013857 -1.2944 -0.00075367 -1.0564 -0.00061511 582.275479439362 586.282605571437 24.421 0.4097 24.421 24.279 24.689 0 67 15 7 0 0 0 1.7773E-05 2 10170 104.43 95.521 1 0.59156 0.5794 0 21987000 13940000 8046600 31093 1525 11815 12138 48456;48457 48456 SGGVNQYVVQEVLSIK 16 1 0 Unmodified _SGGVNQYVVQEVLSIK_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00;A0PJ76;F5GZK7;F5H431 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.4747 2 860.467426 1718.9203 65557.84 0.90798 0.00078129 -0.20914 -0.00017996 0.69884 0.00060133 860.46720316328 864.474101702993 116.02 0.85542 116.02 115.71 116.56 0 345 54 11 0 0 0 4.5485E-81 2 73966 206.18 206.18 1 0.92714 1.0618 0 189630000 96187000 93448000 31094 908 11816 12139 48458;48459 48459 SGGVNQYVVQEVLSIK 16 1 0 Unmodified _SGGVNQYVVQEVLSIK_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00;A0PJ76;F5GZK7;F5H431 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.4683 2 860.467426 1718.9203 65954.59 0.87632 0.00075405 -0.030116 -2.5914E-05 0.84621 0.00072813 860.968820537116 864.474360406707 115.44 0.86699 115.44 115.16 116.03 0 335 56 11 0 0 0 4.616E-68 2 75249 192.86 192.86 1 0.91069 1.07 0 355670000 189160000 166510000 31095 908 11816 12139 48460;48461 48461 SGGVNQYVVQEVLSIK 16 1 0 Unmodified _SGGVNQYVVQEVLSIK_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00;A0PJ76;F5GZK7;F5H431 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.9711 2 860.467426 1718.9203 65304.55 1.1032 0.0009493 -0.2194 -0.00018879 0.88383 0.00076051 860.467498781875 864.474310163703 128.35 1.0591 128.35 127.95 129.01 1.5259E-05 195 45 9 0 0 0 5.0187E-68 3 77442 192.14 192.14 1 1.6083 1.4039 0 169620000 65389000 104230000 31096 908 11816 12139 48462;48463;48464 48464 SGGVNQYVVQEVLSIK 16 1 0 Unmodified _SGGVNQYVVQEVLSIK_ 0 0 0 B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00;A0PJ76;F5GZK7;F5H431 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 860.4678 2 860.467426 1718.9203 65543.76 0.69638 0.00059921 0.15623 0.00013443 0.85261 0.00073364 860.467899057964 864.474660040087 128.15 0.91934 128.15 127.65 128.57 0 195 37 9 0 0 0 4.431E-10 3 76365 112.44 112.44 1 1.6089 1.3856 0 176700000 68992000 107700000 31097 908 11816 12139 48465;48466;48467 48467 SGHFEQAIK 9 1 0 Unmodified _SGHFEQAIK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.7686 2 508.761623 1015.50869 85359.11 0.10276 5.2283E-05 0.82331 0.00041887 0.92608 0.00047115 508.761708743113 512.768716964091 21.452 0.32062 21.452 21.322 21.643 0 65 14 7 0 0 0 0.00087689 1 7616 93.111 61.176 1 1.4811 1.5186 0 31947000 13068000 18880000 31098 415 11817 12140 48468 48468 SGHFEQAIK 9 1 0 Unmodified _SGHFEQAIK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.7679 2 508.761623 1015.50869 85080.27 0.19881 0.00010115 0.070589 3.5913E-05 0.2694 0.00013706 508.761385644343 512.768459988833 23.212 0.44631 23.212 23.059 23.505 0 68 19 6 0 0 0 0.0032616 1 7300 72.243 48.022 1 5.0028 4.0609 0 2853100 445040 2408000 31099 415 11817 12140 48469 48469 SGICSLHPLLR 11 0 1 Unmodified _SGICSLHPLLR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.5664 3 418.232535 1251.67578 93022.96 0.12773 5.342E-05 -0.46739 -0.00019548 -0.33967 -0.00014206 418.232340558695 421.568609012784 68.984 0.83061 68.984 68.486 69.317 0 296 72 7 0 0 0 0.0084766 1 39850 40.154 33.86 1 0.95179 0.9818 0 24210000 11157000 13052000 31100 897 11818 12141 48470 48470 SGICSLHPLLR 11 0 1 Unmodified _SGICSLHPLLR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.2323 3 418.232535 1251.67578 92959.45 0.1746 7.3023E-05 0.21409 8.9539E-05 0.38869 0.00016256 418.232241811945 421.568668125473 66.801 0.78141 66.801 66.416 67.197 7.6294E-06 323 67 6 0 0 0 0.028574 1 39373 28.806 28.806 1 0.88603 0.95958 0 27413000 13944000 13468000 31101 897 11818 12141 48471 48471 SGICSLHPLLR 11 0 1 Unmodified _SGICSLHPLLR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 418.2323 3 418.232535 1251.67578 90853.84 -0.37152 -0.00015538 0.39068 0.00016339 0.019153 8.0104E-06 418.232567703039 421.56876447638 77.83 0.73268 77.83 77.379 78.111 0 187 49 6 0 0 0 0.037417 2 41632 24.853 24.853 1 1.1502 0.98836 0 7927400 3473300 4454000 31102 897 11818 12141 48472;48473 48472 SGICSLHPLLR 11 0 1 Unmodified _SGICSLHPLLR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 421.569 3 418.232535 1251.67578 91850.97 -0.30591 -0.00012794 0.71255 0.00029801 0.40665 0.00017007 418.232650039586 421.568882106827 77.831 0.6718 77.831 77.514 78.186 0 204 43 6 0 0 0 0.03552 1 40881 25.701 15.696 1 1.2068 1.0036 0 5036100 2189300 2846800 31103 897 11818 12141 48474 48474 SGIGDRPLQDLSNTSFVSNNTAESENK 27 1 1 Unmodified _SGIGDRPLQDLSNTSFVSNNTAESENK_ 0 0 1 Q562F6 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 961.4609 3 960.791717 2879.35332 62567.2 0.34658 0.00033299 0.39855 0.00038292 0.74513 0.00071591 961.126033165942 967.134175426185 85.727 0.67708 85.727 85.413 86.09 0 344 57 9 0 0 0 2.4035E-06 3 51437 38.196 38.196 1 0.9353 1.0792 0 28100000 12548000 15552000 31104 1795 11819 12142 48475;48476;48477 48477 SGIGDRPLQDLSNTSFVSNNTAESENK 27 1 1 Unmodified _SGIGDRPLQDLSNTSFVSNNTAESENK_ 0 0 1 Q562F6 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.799 3 960.791717 2879.35332 61532.02 0.49063 0.00047139 0.071239 6.8446E-05 0.56187 0.00053984 961.125894195218 967.133546958647 84.751 0.58506 84.751 84.531 85.116 0 322 49 9 0 0 0 1.2498E-15 3 52023 63.893 60.906 1 1.028 1.199 0 45545000 21774000 23772000 31105 1795 11819 12142 48478;48479;48480 48479 SGIGDRPLQDLSNTSFVSNNTAESENK 27 1 1 Unmodified _SGIGDRPLQDLSNTSFVSNNTAESENK_ 0 0 1 Q562F6 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 967.1349 3 960.791717 2879.35332 61837.95 0.10948 0.00010519 0.43044 0.00041356 0.53992 0.00051875 961.126221432825 967.13395520249 98.158 0.59595 98.158 97.891 98.487 0 266 37 11 0 0 0 0.0011438 2 55212 24.586 22.448 1 1.9889 1.723 0 15901000 4754100 11147000 31106 1795 11819 12142 48481;48482 48481 SGIGDRPLQDLSNTSFVSNNTAESENK 27 1 1 Unmodified _SGIGDRPLQDLSNTSFVSNNTAESENK_ 0 0 1 Q562F6 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 961.4607 3 960.791717 2879.35332 61485.41 0.14863 0.00014281 0.079852 7.6722E-05 0.22849 0.00021953 961.460007673144 967.133694045133 98.045 0.63643 98.045 97.719 98.356 0 276 38 11 0 0 0 0.00085249 2 54359 27.734 25.085 1 1.9501 1.6505 0 12132000 4341300 7791000 31107 1795 11819 12142 48483;48484 48484 SGIIPQTR 8 0 1 Unmodified _SGIIPQTR_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.2531 2 436.253434 870.492316 90811.84 0.11749 5.1257E-05 -0.62093 -0.00027088 -0.50344 -0.00021963 436.253387207181 441.25695020604 39.206 0.64946 39.206 38.92 39.569 0 188 52 5 0 0 0 0.04275 1 20280 46.39 20.451 1 0.95893 0.98097 0 34028000 16765000 17263000 31108 780 11820 12143 48485 48485 SGLELLK 7 1 0 Unmodified _SGLELLK_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 380.2337 2 380.234179 758.453805 103948.7 -0.19982 -7.5979E-05 0.050212 1.9092E-05 -0.14961 -5.6887E-05 380.234041068332 384.241225381119 66.888 0.48003 66.888 66.702 67.182 0 87 34 4 0 0 0 0.025144 1 38634 89.369 5.9923 1 0.67466 0.6851 0 6196100 3504400 2691700 31109 1270 11821 12144 48486 48486 SGLELLK 7 1 0 Unmodified _SGLELLK_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 380.2339 2 380.234179 758.453805 NaN NaN NaN -0.4095 -0.00015571 NaN NaN NaN NaN 65.577 0.40092 65.577 65.348 65.749 0 0 0 0 0.032752 1 38642 77.741 16.18 1 NaN NaN 0 5546500 5546500 0 31110 1270 11821 12144 48487 48487 SGLLVLTTPLASLAPR 16 0 1 Unmodified _SGLLVLTTPLASLAPR_ 0 0 0 Q13057;K7ES73;K7EN91;K7EP09;K7EPT0;K7ESK6;B4E1C0 Q13057 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.9939 2 804.987798 1607.96104 68546.31 1.17 0.00094183 -0.060539 -4.8733E-05 1.1095 0.0008931 804.987533807162 809.991932505159 130.11 0.65167 130.11 129.88 130.53 0 144 39 6 0 0 0 0.00012272 1 84708 77.593 77.593 1 1.3286 1.3749 0 10325000 4716200 5608700 31111 1704 11822 12145 48488 48488 SGLLVLTTPLASLAPR 16 0 1 Unmodified _SGLLVLTTPLASLAPR_ 0 0 0 Q13057;K7ES73;K7EN91;K7EP09;K7EPT0;K7ESK6;B4E1C0 Q13057 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.9883 2 804.987798 1607.96104 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.97 1 129.97 129.47 130.47 0 0 0 0 0.0006373 1 84723 75.819 50.383 1 31112 1704 11822 12145 48489 48489 SGLLVLTTPLASLAPR 16 0 1 Unmodified _SGLLVLTTPLASLAPR_ 0 0 0 Q13057;K7ES73;K7EN91;K7EP09;K7EPT0;K7ESK6;B4E1C0 Q13057 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.9949 2 804.987798 1607.96104 68464.61 0.67887 0.00054648 0.25616 0.00020621 0.93504 0.00075269 804.988087755508 809.992197592661 129.61 0.67584 129.61 129.4 130.08 0 185 44 7 0 0 0 1.0965E-06 2 86511 96.64 96.64 1 1.465 1.4366 0 13941000 5762100 8179200 31113 1704 11822 12145 48490;48491 48490 SGLNQIPNRR 10 0 2 Unmodified _SGLNQIPNRR_ 0 0 1 Q6P2Q9;B4DK16;Q6JH02;Q6JH03;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 385.5509 3 385.551144 1153.6316 95467.02 -0.29444 -0.00011352 -0.1006 -3.8787E-05 -0.39504 -0.00015231 385.551131326096 392.223214731927 23.308 0.4762 23.308 23.08 23.556 0 92 22 8 0 0 0 0.00012741 2 9201 85.731 59.719 1 0.89657 0.97329 0 28966000 14599000 14367000 31114 1854 11823 12146 48492;48493 48493 SGLNQIPNRR 10 0 2 Unmodified _SGLNQIPNRR_ 0 0 1 Q6P2Q9;B4DK16;Q6JH02;Q6JH03;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.8318 2 577.823078 1153.6316 78597.73 0.091301 5.2756E-05 0.053219 3.0751E-05 0.14452 8.3507E-05 577.822944192255 587.831336750934 23.301 0.42651 23.301 23.08 23.507 0 66 20 6 0 0 0 0.0109 1 9204 48.794 40.331 1 0.76668 0.82896 0 20898000 11147000 9751300 31115 1854 11823 12146 48494 48494 SGLNQIPNRR 10 0 2 Unmodified _SGLNQIPNRR_ 0 0 1 Q6P2Q9;B4DK16;Q6JH02;Q6JH03;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 385.5509 3 385.551144 1153.6316 93543.16 -0.086253 -3.3255E-05 -0.62504 -0.00024099 -0.7113 -0.00027424 385.551052433721 392.222694429603 23.024 0.35862 23.024 22.843 23.202 0 64 14 7 0 0 0 0.00038341 2 8947 73.233 46.821 1 1.2784 1.4626 0 47037000 22889000 24148000 31116 1854 11823 12146 48495;48496 48496 SGLNQIPNRR 10 0 2 Unmodified _SGLNQIPNRR_ 0 0 1 Q6P2Q9;B4DK16;Q6JH02;Q6JH03;I3L3Z8 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.8229 2 577.823078 1153.6316 78791.83 0.28624 0.0001654 0.054914 3.1731E-05 0.34115 0.00019713 577.822999034242 587.83148591025 23.028 0.28929 23.028 22.843 23.133 0 54 11 7 0 0 0 0.010445 1 8948 60.91 60.91 1 0.74446 0.85576 0 56508000 32169000 24339000 31117 1854 11823 12146 48497 48497 SGLQTDYATEK 11 1 0 Unmodified _SGLQTDYATEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.7905 2 606.790775 1211.567 78548.59 0.85227 0.00051715 -0.15865 -9.6268E-05 0.69362 0.00042088 606.790420482601 610.79766723252 31.39 0.87009 31.39 30.93 31.8 1.9073E-06 330 81 6 0 0 0 0.00035658 3 15565 84.882 71.23 1 1.8542 2.0353 0 53504000 19889000 33615000 31118 1569 11824 12147 48498;48499;48500 48499 SGLQTDYATEK 11 1 0 Unmodified _SGLQTDYATEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.7984 2 606.790775 1211.567 78618.03 0.52385 0.00031787 0.15804 9.5895E-05 0.68189 0.00041376 606.790670811722 610.797860365166 30.757 0.57528 30.757 30.545 31.12 0 235 49 6 0 0 0 0.0017877 1 15064 78.513 64.711 1 1.8798 2.1101 0 76147000 24389000 51758000 31119 1569 11824 12147 48501 48501 SGLQTDYATEK 11 1 0 Unmodified _SGLQTDYATEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.798 2 606.790775 1211.567 77380.49 0.22543 0.00013679 0.45837 0.00027814 0.6838 0.00041493 606.790808067383 610.797938729654 35.903 1.1253 35.903 35.559 36.684 0 436 96 8 0 0 0 0.005488 3 15902 65.5 56.286 1 3.842 2.9858 0 15199000 2746800 12452000 31120 1569 11824 12147 48502;48503;48504 48502 SGLQTDYATEK 11 1 0 Unmodified _SGLQTDYATEK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.7978 2 606.790775 1211.567 78816.13 0.43941 0.00026663 -0.032988 -2.0017E-05 0.40642 0.00024661 606.790536288831 610.797745153674 36.397 1.3265 36.397 35.667 36.993 0 521 116 7 0 0 0 0.0015918 1 15897 76.143 64.096 1 3.8315 3.104 0 13308000 2824900 10483000 31121 1569 11824 12147 48505 48505 SGLSSPIYIDLR 12 0 1 Unmodified _SGLSSPIYIDLR_ 0 0 0 A8K5J1;P11172;B5LY71;B5LY69;E9PFD2;B5LY67;F2Z3P2;F2Z303;F8WDG4 A8K5J1 A8K5J1 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.8658 2 660.861534 1319.70852 76008.66 0.78848 0.00052107 -0.038801 -2.5642E-05 0.74968 0.00049543 660.862201334547 665.865568400911 105.96 0.50195 105.96 105.72 106.22 0 140 36 5 0 0 0 0.0099857 1 65732 46.73 39.799 1 2.1055 2.207 0 12348000 4128500 8219900 31122 749 11825 12148 48506 48506 SGLSSPIYIDLR 12 0 1 Unmodified _SGLSSPIYIDLR_ 0 0 0 A8K5J1;P11172;B5LY71;B5LY69;E9PFD2;B5LY67;F2Z3P2;F2Z303;F8WDG4 A8K5J1 A8K5J1 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.8662 2 660.861534 1319.70852 75916.48 0.80963 0.00053506 0.14204 9.387E-05 0.95168 0.00062893 660.861910123614 665.865604241509 105.3 0.51715 105.3 105.01 105.53 0 164 37 6 0 0 0 0.00035606 1 66783 72.2 61.443 1 1.9346 2.1004 0 28158000 10939000 17220000 31123 749 11825 12148 48507 48507 SGLVPQQIK 9 1 0 Unmodified _SGLVPQQIK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;C9J5E5;C9JIZ1;C9JZI8;C9JHS7;C9JHZ8;C9JES8;C9JT62;C9JK79;C9JMQ6;C9JQ82;C9JBS3;C9JEJ8;C9JHN6 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.2973 2 485.290017 968.565481 89889.39 0.33067 0.00016047 0.68404 0.00033196 1.0147 0.00049243 485.290253954003 489.297399407561 49.535 0.48645 49.535 49.406 49.893 0 110 39 4 0 0 0 0.015615 1 27828 54.611 33.311 1 2.3057 2.345 0 30320000 9182800 21137000 31124 154 11826 12149 48508 48508 SGMSHEEDQLIPNLYR 16 0 1 Oxidation (M) _SGM(ox)SHEEDQLIPNLYR_ SGM(1)SHEEDQLIPNLYR SGM(40.86)SHEEDQLIPNLYR 0 1 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.9682 3 635.631752 1903.87343 76371.23 0.42107 0.00026764 0.12007 7.6322E-05 0.54114 0.00034397 635.631922585557 638.96771916855 78.086 0.69912 78.086 77.709 78.408 0 278 59 6 0 0 0 0.00062017 1 47263 40.857 36.24 1 1.142 1.2507 0 31075000 14681000 16394000 31125 1854 11827 12150 48509 48509 1715 SGNELPLAVASTADLIR 17 0 1 Unmodified _SGNELPLAVASTADLIR_ 0 0 0 Q9Y4W2;B7Z381 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.9749 2 863.970333 1725.92611 66754.3 0.9555 0.00082552 -0.62902 -0.00054346 0.32648 0.00028207 863.968599798262 868.973811735264 118.22 0.44275 118.22 117.98 118.42 0 122 25 8 0 0 0 0.0008179 2 75871 45.207 45.207 1 1.0882 1.1285 0 20616000 9367700 11248000 31126 2146 11828 12151 48510;48511 48510 SGNELPLAVASTADLIR 17 0 1 Unmodified _SGNELPLAVASTADLIR_ 0 0 0 Q9Y4W2;B7Z381 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.9747 2 863.970333 1725.92611 65835.29 1.0547 0.00091126 -0.075042 -6.4834E-05 0.9797 0.00084643 863.969137551822 868.974225938607 117.74 0.40099 117.74 117.53 117.93 7.6294E-06 148 27 8 0 0 0 1.1597E-06 2 77194 89.507 89.507 1 1.3532 1.3848 0 20912000 8949800 11962000 31127 2146 11828 12151 48512;48513 48512 SGNELPLAVASTADLIR 17 0 1 Unmodified _SGNELPLAVASTADLIR_ 0 0 0 Q9Y4W2;B7Z381 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 868.9737 2 863.970333 1725.92611 65771.09 0.52361 0.00045238 0.19849 0.00017149 0.7221 0.00062388 863.9704466856 868.974465150165 130.63 0.56943 130.63 130.41 130.98 0 107 26 6 0 0 0 0.00069535 2 79173 46.069 46.069 1 1.0202 0.85313 0 3796100 1835700 1960400 31128 2146 11828 12151 48514;48515 48514 SGNIVAGIANESK 13 1 0 Unmodified _SGNIVAGIANESK_ 0 0 0 B4DUT7;A0A140VJK6;P49915;Q53F90 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.3409 2 630.333141 1258.65173 NaN NaN NaN 0.24141 0.00015217 NaN NaN NaN NaN 54.902 0.46836 54.902 54.734 55.203 0 0 0 0 0.028756 1 30810 43.382 32.553 1 NaN NaN 0 7106700 0 7106700 31129 604 11829 12152 48516 48516 SGNIVAGIANESK 13 1 0 Unmodified _SGNIVAGIANESK_ 0 0 0 B4DUT7;A0A140VJK6;P49915;Q53F90 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.3341 2 630.333141 1258.65173 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.904 1 54.904 54.404 55.404 0 0 0 0 0.0044289 1 30881 60.49 37.75 1 31130 604 11829 12152 48517 48517 SGNIVAGIANESK 13 1 0 Unmodified _SGNIVAGIANESK_ 0 0 0 B4DUT7;A0A140VJK6;P49915;Q53F90 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3408 2 630.333141 1258.65173 NaN NaN NaN 0.25413 0.00016019 NaN NaN NaN NaN 53.894 0.61339 53.894 53.559 54.172 0 0 0 0 0.016752 1 30789 49.632 29.641 1 NaN NaN 0 8038900 0 8038900 31131 604 11829 12152 48518 48518 SGNIVAGIANESK 13 1 0 Unmodified _SGNIVAGIANESK_ 0 0 0 B4DUT7;A0A140VJK6;P49915;Q53F90 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.3331 2 630.333141 1258.65173 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.816 1 53.816 53.316 54.316 -3.8147E-06 0 0 0 0.012614 1 30753 52.495 35.47 1 31132 604 11829 12152 48519 48519 SGNNETFTPNRVEK 14 1 1 Unmodified _SGNNETFTPNRVEK_ 0 0 1 Q6P0N0;G5E9K5;C9J2Q8 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.601 3 531.593626 1591.75905 NaN NaN NaN 0.17092 9.086E-05 NaN NaN NaN NaN 25.815 0.22839 25.815 25.695 25.923 1.9073E-06 0 0 0 0.040641 1 11400 40.025 27.665 1 NaN NaN 0 5297300 0 5297300 31133 1849 11830 12153 48520 48520 SGNNETFTPNRVEK 14 1 1 Unmodified _SGNNETFTPNRVEK_ 0 0 1 Q6P0N0;G5E9K5;C9J2Q8 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.8876 2 796.8868 1591.75905 67921.63 1.2067 0.00096163 0.48025 0.00038271 1.687 0.0013443 796.886785426575 805.898865906017 25.442 0.21483 25.442 25.328 25.543 0 20 8 4 0 0 0 0.00012359 1 11089 97.214 97.214 1 0.69974 0.79053 0 15254000 8125400 7128900 31134 1849 11830 12153 48521 48521 SGNPLQPVSIENR 13 0 1 Unmodified _SGNPLQPVSIENR_ 0 0 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3754 2 705.870422 1409.72629 73416.63 0.5845 0.00041258 0.44268 0.00031247 1.0272 0.00072505 705.870729676598 710.87427556488 68.378 0.46977 68.378 68.133 68.603 0 117 40 4 0 0 0 0.00012183 1 39598 77.387 72.167 1 1.1211 1.1332 0 9651700 5520500 4131200 31135 1833 11831 12154 48522 48522 SGNPLQPVSIENR 13 0 1 Unmodified _SGNPLQPVSIENR_ 0 0 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.8707 2 705.870422 1409.72629 71605.53 0.60618 0.00042788 -0.18404 -0.00012991 0.42214 0.00029797 705.869451669227 710.874537686929 78.128 0.53916 78.128 77.854 78.393 0 119 34 5 0 0 0 0.057411 1 41857 27.644 27.644 1 1.5762 1.3172 0 3419400 1141600 2277800 31136 1833 11831 12154 48523 48523 SGPASTFNDR 10 0 1 Unmodified _SGPASTFNDR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;Q9NVP8;Q9NVC0 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.2479 2 526.243795 1050.47304 83717.05 0.3343 0.00017592 -0.2389 -0.00012572 0.095392 5.02E-05 526.243674628656 531.247826067814 24.135 0.36051 24.135 23.976 24.337 0 54 16 5 0 0 0 0.00095587 1 9889 78.516 68.928 1 1.3643 1.4145 0 22803000 9484700 13318000 31137 883 11832 12155 48524 48524 SGPASTFNDR 10 0 1 Unmodified _SGPASTFNDR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;Q9NVP8;Q9NVC0 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.2436 2 526.243795 1050.47304 82242.69 -0.17094 -8.9954E-05 0.74547 0.0003923 0.57454 0.00030235 526.243866467668 531.248072442688 23.859 0.34695 23.859 23.725 24.072 0 60 13 7 0 0 0 0.0037244 2 9669 63.216 51.805 1 1.4783 1.6173 0 34063000 14456000 19606000 31138 883 11832 12155 48525;48526 48525 SGPFGQIFRPDNFVFGQSGAGNNWAK 26 1 1 Unmodified _SGPFGQIFRPDNFVFGQSGAGNNWAK_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;B4DQN9;B4DMJ5;Q8IZ29;P68371;Q8N6N5;Q8IWP6;M0QY85;M0QZL7;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;A5D907;A5D906;A1L195;P04350;B4DE77;B4DJ43;M0R278;M0R1I1 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 939.7957 3 933.452642 2797.3361 61644.86 1.1063 0.0010327 -0.33641 -0.00031402 0.7699 0.00071866 933.786750334277 939.794088703124 118.51 1.4918 118.51 118.04 119.53 7.6294E-06 828 91 13 0 0 0 3.2705E-36 6 76432 126.27 126.27 1 1.3908 1.6872 0 323200000 138410000 184790000 31139 1452;1660;1723;1441 11833 12156 48527;48528;48529;48530;48531;48532 48531 SGPFGQIFRPDNFVFGQSGAGNNWAK 26 1 1 Unmodified _SGPFGQIFRPDNFVFGQSGAGNNWAK_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;B4DQN9;B4DMJ5;Q8IZ29;P68371;Q8N6N5;Q8IWP6;M0QY85;M0QZL7;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;A5D907;A5D906;A1L195;P04350;B4DE77;B4DJ43;M0R278;M0R1I1 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 939.795 3 933.452642 2797.3361 61618.32 0.87484 0.00081662 -0.14631 -0.00013657 0.72853 0.00068005 933.787026406446 939.794204023305 117.86 1.3608 117.86 117.47 118.83 -7.6294E-06 807 87 14 0 0 0 7.2811E-150 4 77263 231.29 231.29 1 1.3881 1.654 0 579700000 230390000 349310000 31140 1452;1660;1723;1441 11833 12156 48533;48534;48535;48536 48534 SGPFGQIFRPDNFVFGQSGAGNNWAK 26 1 1 Unmodified _SGPFGQIFRPDNFVFGQSGAGNNWAK_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;B4DQN9;B4DMJ5;Q8IZ29;P68371;Q8N6N5;Q8IWP6;M0QY85;M0QZL7;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;A5D907;A5D906;A1L195;P04350;B4DE77;B4DJ43;M0R278;M0R1I1 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 939.7953 3 933.452642 2797.3361 62245.89 0.70887 0.0006617 0.05224 4.8764E-05 0.76111 0.00071046 933.787089038249 939.794476968003 129.67 0.94089 129.67 129.41 130.35 0 398 43 15 0 0 0 5.4602E-06 2 78619 38.374 38.374 1 1.2626 1.1374 0 112680000 46189000 66488000 31141 1452;1660;1723;1441 11833 12156 48537;48538 48538 SGPFGQIFRPDNFVFGQSGAGNNWAK 26 1 1 Unmodified _SGPFGQIFRPDNFVFGQSGAGNNWAK_ 0 0 1 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;B4DQN9;B4DMJ5;Q8IZ29;P68371;Q8N6N5;Q8IWP6;M0QY85;M0QZL7;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;A5D907;A5D906;A1L195;P04350;B4DE77;B4DJ43;M0R278;M0R1I1 Q5JP53;Q8IZ29;Q13885;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB4A;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 933.7872 3 933.452642 2797.3361 62363.02 0.92085 0.00085957 0.030714 2.867E-05 0.95157 0.00088824 933.787181536171 939.794331740304 129.53 0.8558 129.53 129.27 130.13 0 345 34 15 0 0 0 1.2082E-09 2 77382 55.526 55.526 1 1.3376 1.1441 0 107280000 46028000 61251000 31142 1452;1660;1723;1441 11833 12156 48539;48540 48539 SGPPAPEEEEEEER 14 0 1 Unmodified _SGPPAPEEEEEEER_ 0 0 0 Q9NTI5;A9IYQ1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.8392 2 792.836639 1583.65872 NaN NaN NaN -0.14774 -0.00011713 NaN NaN NaN NaN 26.325 0.27599 26.325 26.176 26.452 0 0 0 0 0.0033527 1 11744 62.466 59.21 1 NaN NaN 0 3262600 3262600 0 31143 2069 11834 12157 48541 48541 SGPPAPEEEEEEER 14 0 1 Unmodified _SGPPAPEEEEEEER_ 0 0 0 Q9NTI5;A9IYQ1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.8428 2 792.836639 1583.65872 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.246 1 26.246 25.746 26.746 0 0 0 0 0.048739 1 11714 40.589 35.31 1 31144 2069 11834 12157 48542 48542 SGPPAPEEEEEEER 14 0 1 Unmodified _SGPPAPEEEEEEER_ 0 0 0 Q9NTI5;A9IYQ1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.837 2 792.836639 1583.65872 69148.77 1.0478 0.00083077 0.02629 2.0844E-05 1.0741 0.00085162 792.83684705072 797.84100307873 25.958 0.16967 25.958 25.893 26.063 0 36 9 5 0 0 0 0.00016295 2 11452 74.611 72.67 1 0.68376 0.68152 0 8933500 4384500 4549000 31145 2069 11834 12157 48543;48544 48544 SGPPAPEEEEEEERQSGNTEQK 22 1 1 Unmodified _SGPPAPEEEEEEERQSGNTEQK_ 0 0 1 Q9NTI5;A9IYQ1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 825.7012 3 819.693121 2456.05753 67070.41 0.70363 0.00057676 0.20063 0.00016446 0.90427 0.00074122 820.027556655202 825.70083166018 22.598 0.2858 22.598 22.436 22.722 -1.9073E-06 47 11 6 0 0 0 0.020333 1 8597 20.625 20.625 1 0.79148 0.87454 0 7054000 3720800 3333100 31146 2069 11835 12158 48545 48545 SGPPAPEEEEEEERQSGNTEQK 22 1 1 Unmodified _SGPPAPEEEEEEERQSGNTEQK_ 0 0 1 Q9NTI5;A9IYQ1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.028 3 819.693121 2456.05753 66275.7 0.53409 0.00043779 0.052852 4.3322E-05 0.58694 0.00048111 820.027511812577 825.700531703048 26.375 0.40124 26.375 26.19 26.591 1.9073E-06 98 17 8 0 0 0 0.057112 1 9402 13.057 13.057 1 0.60973 0.52428 0 2492900 1364500 1128400 31147 2069 11835 12158 48546 48546 SGPPEGGSVAVQDADIEK 18 1 0 Unmodified _SGPPEGGSVAVQDADIEK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.9261 2 878.423413 1754.83227 64985.26 0.39404 0.00034614 0.7306 0.00064178 1.1246 0.00098791 878.425023938002 882.932407986454 56.261 0.50249 56.261 55.996 56.499 0 136 37 5 0 0 0 5.2196E-12 1 32211 108.71 108.71 1 0.77211 0.77274 0 13984000 7774600 6209100 31148 2100 11836 12159 48547 48547 SGPPEGGSVAVQDADIEK 18 1 0 Unmodified _SGPPEGGSVAVQDADIEK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 878.4241 2 878.423413 1754.83227 65132.02 0.56516 0.00049645 -0.019194 -1.686E-05 0.54596 0.00047959 878.925056794856 882.430025843435 67 0.59071 67 66.696 67.286 0 164 39 5 0 0 0 0.011841 1 34803 27.767 27.361 1 1.86 1.4649 0 5794100 1790400 4003700 31149 2100 11836 12159 48548 48548 SGPSLNELIPDGYNR 15 0 1 Unmodified _SGPSLNELIPDGYNR_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 821.4098 2 816.404826 1630.7951 66862.42 1.0664 0.00087064 1.1036 0.00090097 2.17 0.0017716 816.405794185979 821.410966373207 114.37 1.3235 114.37 113.41 114.73 -7.6294E-06 258 59 9 0 0 0 4.0481E-10 2 66705 114.76 111 1 2.1194 1.7828 0 27269000 8549500 18719000 31150 1945 11837 12160 48549;48550 48550 SGPSLNELIPDGYNR 15 0 1 Unmodified _SGPSLNELIPDGYNR_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 821.4092 2 816.404826 1630.7951 66911.14 0.81235 0.00066321 0.87158 0.00071156 1.6839 0.0013748 816.405801637264 821.409909672594 114.26 0.91908 114.26 113.72 114.64 -7.6294E-06 217 39 8 0 0 0 2.1171E-30 2 65732 153.74 138.54 1 2.1197 1.849 0 31729000 9803900 21925000 31151 1945 11837 12160 48551;48552 48551 SGQGAFGNMCR 11 0 1 Unmodified _SGQGAFGNMCR_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.7543 2 592.750407 1183.48626 82017.41 0.59938 0.00035529 -0.80365 -0.00047637 -0.20427 -0.00012108 592.750001889073 597.753850364496 31.276 0.21157 31.276 31.176 31.388 0 48 18 4 0 0 0 0.004207 1 15459 58.433 54.499 1 0.5692 0.56649 0 8092200 3955300 4136800 31152 1548 11838 12161 48553 48553 SGQGAFGNMCR 11 0 1 Unmodified _SGQGAFGNMCR_ 0 0 0 P36578;Q59GY2;B4DMJ6;B4DFI6;Q53G74;H3BTP7;H3BU31;B4DP82 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.7549 2 592.750407 1183.48626 78603.39 0.28538 0.00016916 -0.0085856 -5.0891E-06 0.27679 0.00016407 592.750492998005 597.75466305252 36.098 0.74268 36.098 35.798 36.541 0 219 62 5 0 0 0 0.00084542 2 16039 72.042 68.786 1 1.1558 0.97173 0 4401900 2254100 2147800 31153 1548 11838 12161 48554;48555 48554 SGQVYSFGCNDEGALGR 17 0 1 Unmodified _SGQVYSFGCNDEGALGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 908.8999 2 908.899582 1815.78461 63417.11 0.64721 0.00058825 -0.078893 -7.1706E-05 0.56832 0.00051654 909.400923532723 913.90399901177 71.997 0.67789 71.997 71.641 72.319 0 317 55 8 0 0 0 2.6581E-07 3 41915 97.69 91.718 1 0.72083 0.77068 0 45016000 25493000 19523000 31154 550 11839 12162 48556;48557;48558 48558 SGQVYSFGCNDEGALGR 17 0 1 Unmodified _SGQVYSFGCNDEGALGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.4059 2 908.899582 1815.78461 63206.85 0.57711 0.00052453 -0.14786 -0.00013439 0.42925 0.00039014 909.401105984199 913.903735432627 70.882 0.66075 70.882 70.564 71.225 0 305 49 8 0 0 0 3.8577E-07 4 42260 96.591 89.932 1 0.72074 0.81635 0 47981000 27871000 20110000 31155 550 11839 12162 48559;48560;48561;48562 48561 SGQVYSFGCNDEGALGR 17 0 1 Unmodified _SGQVYSFGCNDEGALGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 909.4001 2 908.899582 1815.78461 63485.11 0.39198 0.00035627 -0.033944 -3.0852E-05 0.35803 0.00032541 908.899638277814 913.903940775138 82.487 0.74482 82.487 82.172 82.916 0 362 46 10 0 0 0 0.00011897 2 44754 58.071 52.1 1 0.93986 0.80002 0 35389000 18310000 17079000 31156 550 11839 12162 48563;48564 48564 SGQVYSFGCNDEGALGR 17 0 1 Unmodified _SGQVYSFGCNDEGALGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 913.9045 2 908.899582 1815.78461 62879.37 0.33631 0.00030567 -0.17253 -0.00015681 0.16378 0.00014886 908.899608774863 913.903741949445 82.714 0.74588 82.714 82.439 83.185 7.6294E-06 344 42 11 0 0 0 7.2474E-05 2 44115 68.044 65.905 1 0.94385 0.82333 0 28784000 14412000 14372000 31157 550 11839 12162 48565;48566 48566 SGSGTMNLGGSLTR 14 0 1 Oxidation (M) _SGSGTM(ox)NLGGSLTR_ SGSGTM(1)NLGGSLTR SGSGTM(81.68)NLGGSLTR 0 1 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.3265 2 677.32499 1352.63543 72943.93 0.67607 0.00045792 0.33924 0.00022977 1.0153 0.00068769 677.325759354522 682.328976214826 36.78 0.40849 36.78 36.549 36.958 0 133 37 5 0 0 0 5.8643E-05 2 18602 81.676 77.029 1 1.6845 1.729 0 14334000 6985400 7348800 31158 814 11840 12163 48567;48568 48568 649 SGSGTMNLGGSLTR 14 0 1 Oxidation (M) _SGSGTM(ox)NLGGSLTR_ SGSGTM(1)NLGGSLTR SGSGTM(45.89)NLGGSLTR 0 1 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.3296 2 677.32499 1352.63543 72519.3 0.62395 0.00042262 -0.061001 -4.1317E-05 0.56295 0.0003813 677.324759341113 682.329251896039 35.911 0.5204 35.911 35.735 36.256 0 137 42 5 0 0 0 0.0020257 1 18294 45.891 37.67 1 1.6511 1.7805 0 26156000 11131000 15025000 31159 814 11840 12163 48569 48569 649 SGSHTVAVMNVGAPAAGMNAAVR 23 0 1 2 Oxidation (M) _SGSHTVAVM(ox)NVGAPAAGM(ox)NAAVR_ SGSHTVAVM(1)NVGAPAAGM(1)NAAVR SGSHTVAVM(40.38)NVGAPAAGM(40.38)NAAVR 0 2 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;B4E162;Q7KYX9 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.3619 3 734.024766 2199.05247 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.145 1 43.145 42.645 43.645 0 0 0 0 0.0014496 1 23383 40.381 30.966 1 31160 61 11841 12164 48570 48570 31;32 SGSLVQFLLYK 11 1 0 Unmodified _SGSLVQFLLYK_ 0 0 0 Q53G50;B2R8F3;O15479 Q53G50 Q53G50 MAGEB2 Melanoma-associated antigen B2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.3673 2 627.858264 1253.70197 NaN NaN NaN 0.38076 0.00023906 NaN NaN NaN NaN 118.79 0.44347 118.79 118.55 119 0 0 0 0 0.0025767 1 76342 73.26 57.598 1 NaN NaN 0 2683000 0 2683000 31161 861 11842 12165 48571 48571 SGSLVQFLLYK 11 1 0 Unmodified _SGSLVQFLLYK_ 0 0 0 Q53G50;B2R8F3;O15479 Q53G50 Q53G50 MAGEB2 Melanoma-associated antigen B2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.8663 2 627.858264 1253.70197 NaN NaN NaN -0.027406 -1.7207E-05 NaN NaN NaN NaN 118.14 0.40781 118.14 117.91 118.31 0 0 0 0 6.444E-12 1 77667 124.98 104.46 1 NaN NaN 0 3816500 0 3816500 31162 861 11842 12165 48572 48572 SGSMDPSGAHPSVR 14 0 1 Oxidation (M) _SGSM(ox)DPSGAHPSVR_ SGSM(1)DPSGAHPSVR SGSM(47.3)DPSGAHPSVR 0 1 0 B4DDX2;Q07666;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.816 2 700.81479 1399.61503 73021.28 0.74028 0.0005188 0.16326 0.00011441 0.90354 0.00063322 700.814639920441 705.818946563751 16.215 0.49436 16.215 16.021 16.516 0 93 26 7 0 0 0 0.001621 2 3569 47.302 42.689 1 1.5656 1.641 0 12355000 5372900 6982200 31163 962 11843 12166 48573;48574 48573 775 SGSMDPSGAHPSVR 14 0 1 Oxidation (M) _SGSM(ox)DPSGAHPSVR_ SGSM(1)DPSGAHPSVR SGSM(50.16)DPSGAHPSVR 0 1 0 B4DDX2;Q07666;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.546 3 467.545619 1399.61503 87409.7 0.38159 0.00017841 -0.37914 -0.00017727 0.0024441 1.1427E-06 467.545596892813 470.881552875747 16.219 0.43101 16.219 16.021 16.452 0 117 23 9 0 0 0 0.00048964 1 3570 50.155 47.793 1 1.793 1.8425 0 14261000 4077800 10183000 31164 962 11843 12166 48575 48575 775 SGSMDPSGAHPSVR 14 0 1 Oxidation (M) _SGSM(ox)DPSGAHPSVR_ SGSM(1)DPSGAHPSVR SGSM(65.5)DPSGAHPSVR 0 1 0 B4DDX2;Q07666;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.8194 2 700.81479 1399.61503 73287.48 0.1798 0.00012601 0.02556 1.7913E-05 0.20536 0.00014392 700.814478618958 705.819175420454 16.129 0.31023 16.129 15.94 16.25 0 97 21 6 0 0 0 0.00010996 1 3360 65.5 60.888 1 1.6234 1.747 0 3139800 1093600 2046200 31165 962 11843 12166 48576 48576 775 SGSMDPSGAHPSVR 14 0 1 Oxidation (M) _SGSM(ox)DPSGAHPSVR_ SGSM(1)DPSGAHPSVR SGSM(45.21)DPSGAHPSVR 0 1 0 B4DDX2;Q07666;B2R7B5 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.8812 3 467.545619 1399.61503 89406.52 -0.24511 -0.0001146 0.10094 4.7195E-05 -0.14417 -6.7406E-05 467.545588367463 470.88165372035 16.113 0.35156 16.113 15.917 16.269 0 108 24 7 0 0 0 0.0011618 1 3373 45.207 43.768 1 1.6381 1.6537 0 5740900 2461900 3278900 31166 962 11843 12166 48577 48577 775 SGSPAVLAFAK 11 1 0 Unmodified _SGSPAVLAFAK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.2952 2 524.295299 1046.57605 86630.06 0.43008 0.00022549 -0.72282 -0.00037897 -0.29273 -0.00015348 524.295397046391 528.301155179489 76.642 0.66486 76.642 76.252 76.917 0 116 55 4 0 0 0 0.010605 1 45274 48.794 34.019 1 0.66529 0.65488 0 9099700 4454300 4645400 31167 1937 11844 12167 48578 48578 SGSPVATFK 9 1 0 Unmodified _SGSPVATFK_ 0 0 0 Q8NCK5;Q9BQ67;Q8TCJ8;B2RDP6;B4DTI1 Q8NCK5 Q8NCK5 GRWD1;DKFZp564C172 Glutamate-rich WD repeat-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.2396 2 447.239993 892.465432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.805 1 35.805 35.305 36.305 0 0 0 0 0.012923 1 18062 60.828 34.723 1 31168 1922 11845 12168 48579 48579 SGSSQELDVKPSASPQER 18 1 1 Unmodified _SGSSQELDVKPSASPQER_ 0 0 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.9784 3 634.644826 1900.91265 77098.1 0.32623 0.00020704 -0.22208 -0.00014094 0.10415 6.6098E-05 634.644760624844 640.986680245517 30.376 0.42015 30.376 30.068 30.488 0 96 25 6 0 0 0 2.5288E-05 2 14893 47.726 43.947 1 0.83562 0.9296 0 10685000 5158900 5526400 31169 619 11846 12169 48580;48581 48581 SGSSQELDVKPSASPQER 18 1 1 Unmodified _SGSSQELDVKPSASPQER_ 0 0 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.6528 3 634.644826 1900.91265 76445.09 0.27865 0.00017684 0.096489 6.1236E-05 0.37514 0.00023808 634.97911973532 640.652397241656 36.042 0.32524 36.042 35.894 36.219 0 74 25 4 0 0 0 0.017397 1 16113 22.653 22.653 1 0.6393 0.5713 0 2106900 1169700 937280 31170 619 11846 12169 48582 48582 SGTALPSYR 9 0 1 Unmodified _SGTALPSYR_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.2489 2 476.248349 950.482145 86230.41 0.0043822 2.087E-06 1.1451 0.00054535 1.1495 0.00054744 476.249182681283 481.25272251508 37.33 0.42596 37.33 37.135 37.561 3.8147E-06 122 35 5 0 0 0 0.0073059 1 19396 62.107 45.331 1 0.87889 0.96131 0 34529000 19133000 15396000 31171 1224 11847 12170 48583 48583 SGTGFGESYSLANPSIR 17 0 1 Unmodified _SGTGFGESYSLANPSIR_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6;H0YMN5 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 876.925 2 871.92084 1741.82713 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.105 1 83.105 82.605 83.605 0 0 0 0 0.0086258 1 50900 45.79 36.302 1 31172 288 11848 12171 48584 48584 SGTLACTGSLVNNTANDR 18 0 1 Unmodified _SGTLACTGSLVNNTANDR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.9367 2 925.936696 1849.85884 NaN NaN NaN -0.20041 -0.00018556 NaN NaN NaN NaN 57.211 0.6606 57.211 56.924 57.584 0 0 0 0 1.2451E-53 1 32153 166.6 146.94 1 NaN NaN 0 179060000 179060000 0 + 31173 1163 11849 12172 48585 48585 SGTLACTGSLVNNTANDR 18 0 1 Unmodified _SGTLACTGSLVNNTANDR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.4379 2 925.936696 1849.85884 NaN NaN NaN -0.19392 -0.00017956 NaN NaN NaN NaN 56.307 0.47348 56.307 56.039 56.512 0 0 0 0 2.27E-66 1 32267 174.39 157.03 1 NaN NaN 0 225840000 225840000 0 + 31174 1163 11849 12172 48586 48586 SGTLACTGSLVNNTANDR 18 0 1 Unmodified _SGTLACTGSLVNNTANDR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 926.4379 2 925.936696 1849.85884 NaN NaN NaN -0.35692 -0.00033048 NaN NaN NaN NaN 66.895 0.82281 66.895 66.597 67.42 -7.6294E-06 0 0 0 0.023949 1 34634 37.013 31.167 1 NaN NaN 0 36922000 36922000 0 + 31175 1163 11849 12172 48587 48587 SGTLACTGSLVNNTANDR 18 0 1 Unmodified _SGTLACTGSLVNNTANDR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 926.4414 2 925.936696 1849.85884 NaN NaN NaN -0.20777 -0.00019238 NaN NaN NaN NaN 67.454 0.89122 67.454 67.183 68.075 0 0 0 0 3.4492E-09 1 34230 84.753 73.848 1 NaN NaN 0 35273000 35273000 0 + 31176 1163 11849 12172 48588 48588 SGTLACTGSLVNNTANDRK 19 1 1 Unmodified _SGTLACTGSLVNNTANDRK_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 990.4858 2 989.984177 1977.9538 NaN NaN NaN -0.031337 -3.1023E-05 NaN NaN NaN NaN 42.656 0.55582 42.656 42.395 42.951 -3.8147E-06 0 0 0 3.1997E-13 2 22604 122.64 108.98 1 NaN NaN 0 26602000 26602000 0 + 31177 1163 11850 12173 48589;48590 48589 SGTLACTGSLVNNTANDRK 19 1 1 Unmodified _SGTLACTGSLVNNTANDRK_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.3256 3 660.32521 1977.9538 NaN NaN NaN -0.21949 -0.00014494 NaN NaN NaN NaN 42.653 0.79865 42.653 42.327 43.126 -3.8147E-06 0 0 0 4.549E-54 1 22739 163.18 144.82 1 NaN NaN 0 160260000 160260000 0 + 31178 1163 11850 12173 48591 48591 SGTLACTGSLVNNTANDRK 19 1 1 Unmodified _SGTLACTGSLVNNTANDRK_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.3267 3 660.32521 1977.9538 NaN NaN NaN 0.032851 2.1692E-05 NaN NaN NaN NaN 41.779 0.74603 41.779 41.512 42.258 0 0 0 0 9.736E-25 1 22372 129.11 105.97 1 NaN NaN 0 158050000 158050000 0 + 31179 1163 11850 12173 48592 48592 SGTLACTGSLVNNTANDRK 19 1 1 Unmodified _SGTLACTGSLVNNTANDRK_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.9845 2 989.984177 1977.9538 NaN NaN NaN 0.12985 0.00012855 NaN NaN NaN NaN 41.774 0.48217 41.774 41.567 42.049 0 0 0 0 3.6423E-10 1 22392 89.231 73.691 1 NaN NaN 0 37165000 37165000 0 + 31180 1163 11850 12173 48593 48593 SGTLACTGSLVNNTANDRK 19 1 1 Unmodified _SGTLACTGSLVNNTANDRK_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.6599 3 660.32521 1977.9538 NaN NaN NaN -0.63761 -0.00042103 NaN NaN NaN NaN 50.003 1.0046 50.003 49.711 50.716 0 0 0 0 2.2694E-11 1 24429 92.679 83.887 1 NaN NaN 0 45954000 45954000 0 + 31181 1163 11850 12173 48594 48594 SGTLACTGSLVNNTANDRK 19 1 1 Unmodified _SGTLACTGSLVNNTANDRK_ 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 660.3257 3 660.32521 1977.9538 NaN NaN NaN -0.38725 -0.00025571 NaN NaN NaN NaN 50.335 1.0527 50.335 50.004 51.057 3.8147E-06 0 0 0 4.9463E-25 1 24072 130.01 118.97 1 NaN NaN 0 34289000 34289000 0 + 31182 1163 11850 12173 48595 48595 SGVAYIAAPSGSAADK 16 1 0 Unmodified _SGVAYIAAPSGSAADK_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.877 2 732.870088 1463.72562 74966.02 0.96799 0.00070941 1.215 0.00089046 2.183 0.0015999 733.373402656958 736.877364797645 54.442 0.18816 54.442 54.327 54.515 0 33 14 4 0 0 0 0.00013565 1 30629 76.522 70.352 1 2.0222 2.0908 0 12739000 5427000 7311600 31183 852 11851 12174 48596 48596 SGVAYIAAPSGSAADK 16 1 0 Unmodified _SGVAYIAAPSGSAADK_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.8784 2 732.870088 1463.72562 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.581 1 53.581 53.081 54.081 0 0 0 0 0.0093044 1 30633 46.592 31.326 1 31184 852 11851 12174 48597 48597 SGVDGPHFPLSLSTCLFGR 19 0 1 Unmodified _SGVDGPHFPLSLSTCLFGR_ 0 0 0 P46013;Q70L72;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.6771 3 683.007041 2045.9993 72548.62 0.96214 0.00065715 -0.37475 -0.00025595 0.5874 0.0004012 683.340969954833 686.343274202308 118.91 0.95908 118.91 118.48 119.44 -7.6294E-06 433 58 12 0 0 0 5.9448E-06 2 76102 62.203 62.203 1 1.8882 2.233 0 279010000 101500000 177500000 31185 1569;1864 11852 12175 48598;48599 48598 SGVDGPHFPLSLSTCLFGR 19 0 1 Unmodified _SGVDGPHFPLSLSTCLFGR_ 0 0 0 P46013;Q70L72;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3439 3 683.007041 2045.9993 71995.38 0.68925 0.00047076 -0.4317 -0.00029486 0.25755 0.00017591 683.341206140466 686.677360936348 118.17 1.6568 118.17 117.08 118.74 0 451 104 11 0 0 0 7.4814E-23 2 77499 125.45 125.45 1 1.8373 2.1239 0 260010000 95833000 164170000 31186 1569;1864 11852 12175 48600;48601 48600 SGVDGPHFPLSLSTCLFGR 19 0 1 Unmodified _SGVDGPHFPLSLSTCLFGR_ 0 0 0 P46013;Q70L72;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.6786 3 683.007041 2045.9993 72531.66 0.66264 0.00045259 -0.4004 -0.00027347 0.26225 0.00017912 683.341788682894 686.343136385035 130.29 1.0228 130.29 130 131.03 0 272 48 11 0 0 0 1.0951E-06 1 78821 82.449 82.449 1 5.2636 4.5436 0 86500000 9948800 76552000 31187 1569;1864 11852 12175 48602 48602 SGVDGPHFPLSLSTCLFGR 19 0 1 Unmodified _SGVDGPHFPLSLSTCLFGR_ 0 0 0 P46013;Q70L72;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.3441 3 683.007041 2045.9993 71710.91 1.0148 0.0006931 -0.70363 -0.00048059 0.31115 0.00021252 683.67423607553 686.342979285956 130.11 0.83047 130.11 129.8 130.63 0 180 32 10 0 0 0 2.2799E-17 2 77773 119.62 119.62 1 5.6686 4.9487 0 109830000 17421000 92413000 31188 1569;1864 11852 12175 48603;48604 48603 SGVGNIFIK 9 1 0 Unmodified _SGVGNIFIK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;B3KT93;A0A024R9E2;Q4VXU2;E5RGH3;E5RJB9;E5RH24;B4DM75;Q96DU9 A0A087WTT1 A0A087WTT1 PABPC1;PABPC1L;PABPC5 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.7731 2 467.77146 933.528367 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.241 1 73.241 72.741 73.741 0 0 0 0 0.00085338 1 42965 98.904 22.129 1 31189 273 11853 12176 48605 48605 SGVGNVFIK 9 1 0 Unmodified _SGVGNVFIK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;B1ANR1;H0YEQ8 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.7706 2 460.763635 919.512717 NaN NaN NaN 0.19583 9.0231E-05 NaN NaN NaN NaN 60.276 0.42371 60.276 60.023 60.446 0 0 0 0 0.00017584 1 35097 93.374 28.122 1 NaN NaN 0 32042000 0 32042000 31190 818 11854 12177 48606 48606 SGVLDESTIATILR 14 0 1 Unmodified _SGVLDESTIATILR_ 0 0 0 A0A024R2M7;O95747;C9JIG9 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.9136 2 737.909213 1473.80387 72603.34 1.0877 0.00080259 -0.28948 -0.00021361 0.79817 0.00058898 737.909169577013 742.913135293322 118.29 0.47578 118.29 118.04 118.51 0 145 28 7 0 0 0 6.7699E-38 2 75814 171.62 171.62 1 1.8325 1.8949 0 20244000 9571100 10673000 31191 117 11855 12178 48607;48608 48607 SGVLDESTIATILR 14 0 1 Unmodified _SGVLDESTIATILR_ 0 0 0 A0A024R2M7;O95747;C9JIG9 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.9146 2 737.909213 1473.80387 72101.44 1.0088 0.00074442 -0.24688 -0.00018217 0.76195 0.00056225 737.909199090161 742.913247413208 117.85 0.48222 117.85 117.6 118.08 0 161 33 6 0 0 0 2.446E-10 2 77257 124.42 124.42 1 1.7794 1.9359 0 28807000 10432000 18375000 31192 117 11855 12178 48609;48610 48609 SGVLDESTIATILR 14 0 1 Unmodified _SGVLDESTIATILR_ 0 0 0 A0A024R2M7;O95747;C9JIG9 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.9095 2 737.909213 1473.80387 71806.63 0.73703 0.00054386 0.070715 5.2181E-05 0.80775 0.00059605 737.909432902378 742.913438450989 130.41 0.45819 130.41 130.2 130.66 0 109 23 7 0 0 0 0.0013992 2 79046 53.967 53.967 1 1.0633 0.89879 0 4879500 2110700 2768800 31193 117 11855 12178 48611;48612 48612 SGVLDESTIATILR 14 0 1 Unmodified _SGVLDESTIATILR_ 0 0 0 A0A024R2M7;O95747;C9JIG9 A0A024R2M7 A0A024R2M7 OXSR1 Serine/threonine-protein kinase OSR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.914 2 737.909213 1473.80387 71599.95 1.1044 0.00081492 0.15491 0.00011431 1.2593 0.00092923 737.909329994141 742.913613334066 130.23 0.32932 130.23 130.07 130.4 0 79 14 8 0 0 0 2.3261E-05 2 78046 97.163 97.163 1 1.3233 1.1018 0 6228900 2784300 3444600 31194 117 11855 12178 48613;48614 48614 SGVNSELVK 9 1 0 Unmodified _SGVNSELVK_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;H0Y8X0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.7632 2 466.756007 931.497461 88979.23 0.52624 0.00024562 -0.051012 -2.381E-05 0.47522 0.00022181 466.756001079821 470.76286186256 30.238 0.71098 30.238 29.954 30.665 0 248 62 8 0 0 0 1.5383E-05 2 14731 122.19 75.106 1 0.73692 0.87231 0 436030000 265800000 170230000 31195 1546;1018 11856 12179 48615;48616 48616 SGVNSELVK 9 1 0 Unmodified _SGVNSELVK_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;H0Y8X0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7567 2 466.756007 931.497461 88282.46 0.85171 0.00039754 -0.42272 -0.00019731 0.42899 0.00020023 466.755919587925 470.762721973456 29.721 0.72113 29.721 29.465 30.187 0 229 57 9 0 0 0 6.13E-06 2 14365 131.41 77.03 1 0.77546 0.91486 0 832900000 473320000 359570000 31196 1546;1018 11856 12179 48617;48618 48617 SGVNSELVK 9 1 0 Unmodified _SGVNSELVK_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;H0Y8X0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 466.756 2 466.756007 931.497461 89240.05 0.38843 0.0001813 0.016714 7.8013E-06 0.40514 0.0001891 466.75594732704 470.762861148444 34.031 0.54804 34.031 33.731 34.279 0 222 51 8 0 0 0 0.00044654 2 14962 99.136 56.816 1 0.8015 0.66215 0 43122000 25315000 17807000 31197 1546;1018 11856 12179 48619;48620 48620 SGVNSELVK 9 1 0 Unmodified _SGVNSELVK_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;H0Y8X0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.7563 2 466.756007 931.497461 88852.92 0.24497 0.00011434 -0.014672 -6.8484E-06 0.2303 0.0001075 466.755940807713 470.762866382975 34.086 0.52136 34.086 33.792 34.313 0 239 45 8 0 0 0 0.0042207 2 14498 69.812 44.674 1 0.79202 0.65689 0 35499000 19275000 16224000 31198 1546;1018 11856 12179 48621;48622 48621 SGVNSELVKR 10 1 1 Unmodified _SGVNSELVKR_ 0 0 1 P35659;B4DFG0;D6RDA2;H0Y8X0 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.8068 2 544.806562 1087.59857 82792.63 0.46826 0.00025511 -0.54831 -0.00029872 -0.080052 -4.3613E-05 544.806479197642 553.818013010573 22.937 0.59632 22.937 22.588 23.184 0 99 33 6 0 0 0 0.021564 1 8895 50.04 25.885 1 0.53095 0.61337 0 28427000 17571000 10856000 31199 1546 11857 12180 48623 48623 SGVNSELVKR 10 1 1 Unmodified _SGVNSELVKR_ 0 0 1 P35659;B4DFG0;D6RDA2;H0Y8X0 P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.8077 2 544.806562 1087.59857 81721.24 0.4551 0.00024794 -0.71222 -0.00038802 -0.25713 -0.00014008 544.806311682171 553.81763133962 22.556 0.45892 22.556 22.285 22.744 0 53 19 4 0 0 0 0.00061089 1 8534 88.681 47.106 1 0.55917 0.64123 0 23678000 14182000 9496000 31200 1546 11857 12180 48624 48624 SGVNSELVKR 10 1 1 Unmodified _SGVNSELVKR_ 0 0 1 P35659;B4DFG0;D6RDA2;H0Y8X0 P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.8179 2 544.806562 1087.59857 79859.74 0.45934 0.00025025 -0.22485 -0.0001225 0.23449 0.00012775 544.806098636764 553.81768218274 25.038 0.77124 25.038 24.679 25.45 -1.9073E-06 144 39 7 0 0 0 0.035239 1 8978 46.406 16.933 1 0.79134 0.67364 0 9284400 5080500 4203900 31201 1546 11857 12180 48625 48625 SGVNSELVKR 10 1 1 Unmodified _SGVNSELVKR_ 0 0 1 P35659;B4DFG0;D6RDA2;H0Y8X0 P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.8176 2 544.806562 1087.59857 80870.77 0.55167 0.00030055 -0.21824 -0.0001189 0.33343 0.00018165 544.806332280285 553.817616615234 24.936 0.57651 24.936 24.65 25.227 0 126 30 7 0 0 0 0.012315 1 8467 57.55 32.412 1 0.78437 0.66182 0 8884500 4670700 4213700 31202 1546 11857 12180 48626 48626 SGVSITIDDPVR 12 0 1 Unmodified _SGVSITIDDPVR_ 0 0 0 G3V3B0;Q69YJ6;S4R3H4;E7EQT4;Q9UKV3;B4DQZ7 G3V3B0 G3V3B0 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.8357 2 629.835517 1257.65648 75918.77 0.85476 0.00053836 -0.38968 -0.00024543 0.46508 0.00029292 629.835295285072 634.839687090576 82.955 0.71557 82.955 82.64 83.356 0 246 61 8 0 0 0 1.174E-05 3 49575 107.24 94.152 1 1.1511 1.237 0 47076000 23457000 23619000 31203 1220 11858 12181 48627;48628;48629 48627 SGVSITIDDPVR 12 0 1 Unmodified _SGVSITIDDPVR_ 0 0 0 G3V3B0;Q69YJ6;S4R3H4;E7EQT4;Q9UKV3;B4DQZ7 G3V3B0 G3V3B0 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.8415 2 629.835517 1257.65648 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.871 1 81.871 81.371 82.371 0 0 0 0 8.149E-07 1 50058 101.97 83.749 1 31204 1220 11858 12181 48630 48630 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.2648 2 423.258185 844.501818 94429.72 0.037665 1.5942E-05 0.22042 9.3294E-05 0.25808 0.00010924 423.258237989326 427.265270045234 61.703 0.39816 61.703 61.51 61.908 0 99 30 4 0 0 0 0.029256 1 35295 46.334 25.675 1 1.014 0.99913 0 24445000 11563000 12882000 31205 656;1490 11859 12182 48631 48631 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.2587 2 423.258185 844.501818 91420.36 -0.11867 -5.0227E-05 -1.0787 -0.00045657 -1.1974 -0.0005068 423.258471856886 427.264344073363 62.159 1.5327 62.159 61.899 63.431 0 1013 142 11 0 0 0 5.5076E-06 3 35562 132.08 64.891 1 0.91897 1.1291 0 4816500000 2376100000 2440400000 31206 656;1490 11859 12182 48632;48633;48634 48632 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.5098 1 845.509094 844.501818 65357.33 0.4582 0.00038741 0.018504 1.5645E-05 0.4767 0.00040305 845.509055612948 853.523119946211 62.203 1.4731 62.203 61.958 63.431 0 774 136 9 0 0 0 0.0018198 1 36226 93.195 35.915 1 0.9633 1.1561 0 1061800000 537930000 523900000 31207 656;1490 11859 12182 48635 48635 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.2578 2 423.258185 844.501818 91822.91 -0.23324 -9.8722E-05 -0.71498 -0.00030262 -0.94822 -0.00040134 423.258475132809 427.264619375935 60.749 1.8604 60.749 60.526 62.386 -3.8147E-06 1197 172 11 0 0 0 9.8427E-05 6 35502 110.12 63.794 1 0.93414 1.1088 0 5129600000 2501600000 2628100000 31208 656;1490 11859 12182 48636;48637;48638;48639;48640;48641 48637 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.2587 2 423.258185 844.501818 93225.21 -0.1264 -5.3501E-05 0.82379 0.00034867 0.69738 0.00029517 423.258641721574 427.265368993306 62.533 0.94416 62.533 62.357 63.301 -3.8147E-06 317 83 5 0 0 0 0.016543 1 36928 53.775 9.0827 1 0.6597 0.67267 0 31030000 16101000 14929000 31209 656;1490 11859 12182 48642 48642 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.509 1 845.509094 844.501818 NaN NaN NaN 0.1825 0.00015431 NaN NaN NaN NaN 61.682 0.4757 61.682 61.622 62.098 0 0 0 0 0.00022288 1 36119 97.093 36.305 1 NaN NaN 0 9316800 9316800 0 31210 656;1490 11859 12182 48643 48643 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 853.7909 1 845.509094 844.501818 65316.99 0.46943 0.0003969 0.0013988 1.1827E-06 0.47083 0.00039809 845.509030069673 853.523123300595 60.899 1.5612 60.899 60.55 62.111 0 728 143 8 0 0 0 0.0174 1 35457 85.642 31.484 1 0.96454 1.1406 0 1670900000 856470000 814440000 31211 656;1490 11859 12182 48644 48644 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 427.265 2 423.258185 844.501818 91199.94 -0.40947 -0.00017331 -0.54599 -0.00023109 -0.95545 -0.0004044 423.258315026013 427.264805355679 71.774 1.8517 71.774 71.462 73.313 -7.6294E-06 805 136 10 0 0 0 0.0018938 4 37795 79.474 48.185 1 0.59229 0.53724 0 903250000 540180000 363080000 31212 656;1490 11859 12182 48645;48646;48647;48648 48645 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 427.2654 2 423.258185 844.501818 91222.77 -0.70591 -0.00029878 -0.24004 -0.0001016 -0.94595 -0.00040038 423.258449281377 427.26494971177 72.134 2.2525 72.134 71.289 73.542 0 941 170 11 0 0 0 0.0017538 3 37213 81.296 50.007 1 0.58407 0.51775 0 1123700000 678700000 444990000 31213 656;1490 11859 12182 48649;48650;48651 48649 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 423.2585 2 423.258185 844.501818 92317.91 -0.43622 -0.00018463 0.8181 0.00034627 0.38188 0.00016163 423.258514144159 427.26546090547 73.729 1.2154 73.729 73.303 74.519 -7.6294E-06 341 84 6 0 0 0 0.026085 1 38436 47.603 33.446 1 0.52961 0.43243 0 8032200 5208200 2824000 31214 656;1490 11859 12182 48652 48652 SGVSLAALKK 10 2 0 Unmodified _SGVSLAALKK_ 0 0 1 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.7924 2 487.305667 972.596781 86214.36 0.28488 0.00013883 0.1184 5.7696E-05 0.40328 0.00019652 487.305788176963 495.319874012286 40.693 0.41897 40.693 40.485 40.904 0 169 37 6 0 0 0 0.050525 1 21275 41.448 24.063 1 1.4252 1.6828 0 37857000 15514000 22344000 31215 656;1490 11860 12183 48653 48653 SGVSLAALKK 10 2 0 Unmodified _SGVSLAALKK_ 0 0 1 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.3058 2 487.305667 972.596781 85857.55 0.4233 0.00020628 -0.20623 -0.0001005 0.21708 0.00010578 487.305648777845 495.319509722583 39.515 0.31057 39.515 39.359 39.67 0 123 26 6 0 0 0 0.00018754 1 20912 96.948 72.793 1 1.2182 1.4125 0 71747000 34656000 37090000 31216 656;1490 11860 12183 48654 48654 SGVSLAALKK 10 2 0 Unmodified _SGVSLAALKK_ 0 0 1 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.306 2 487.305667 972.596781 85591.88 0.036341 1.7709E-05 -0.11678 -5.6909E-05 -0.080441 -3.92E-05 487.305824529354 495.319642653158 46.441 0.76923 46.441 46.209 46.979 0 280 49 10 0 0 0 0.00026159 2 22356 95.502 60.206 1 0.63271 0.53327 0 186100000 112300000 73795000 31217 656;1490 11860 12183 48655;48656 48655 SGVSLAALKK 10 2 0 Unmodified _SGVSLAALKK_ 0 0 1 Q4VB24;B2R984;A3R0T8;P10412;A3R0T7;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.3195 2 487.305667 972.596781 84985.77 0.040192 1.9586E-05 -0.25861 -0.00012602 -0.21842 -0.00010644 487.305801956296 495.319483455194 46.274 1.0059 46.274 46.028 47.034 0 336 65 10 0 0 0 0.048287 1 21710 43.272 30.916 1 0.67752 0.58181 0 172810000 99088000 73719000 31218 656;1490 11860 12183 48657 48657 SGYFALGNEK 10 1 0 Unmodified _SGYFALGNEK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.2737 2 543.266739 1084.51892 81710.77 0.70355 0.00038221 -0.38191 -0.00020748 0.32164 0.00017473 543.266514311145 547.272985037007 59.687 0.92036 59.687 59.263 60.183 -3.8147E-06 299 75 7 0 0 0 4.8826E-05 3 33901 99.013 99.013 1 1.1064 1.2546 0 94553000 48667000 45885000 31219 876 11861 12184 48658;48659;48660 48658 SGYFALGNEK 10 1 0 Unmodified _SGYFALGNEK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.2743 2 543.266739 1084.51892 82498.9 0.81724 0.00044398 -0.040167 -2.1821E-05 0.77708 0.00042216 543.266726301576 547.273077650029 58.535 0.80312 58.535 58.068 58.871 0 262 67 8 0 0 0 5.7859E-12 2 34012 143.7 133.92 1 1.0238 1.1597 0 136400000 66929000 69470000 31220 876 11861 12184 48661;48662 48662 SGYGFNEPEQSR 12 0 1 Unmodified _SGYGFNEPEQSR_ 0 0 0 Q5BKZ1 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.8058 2 685.802205 1369.58986 74494.8 0.69153 0.00047425 0.15885 0.00010894 0.85037 0.00058319 685.802406323198 690.806501925196 39.322 0.49815 39.322 39.108 39.606 0 164 39 7 0 0 0 0.00023548 2 20286 85.958 74.595 1 1.466 1.4998 0 32405000 14548000 17857000 31221 1804 11862 12185 48663;48664 48663 SGYGFNEPEQSR 12 0 1 Unmodified _SGYGFNEPEQSR_ 0 0 0 Q5BKZ1 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.8029 2 685.802205 1369.58986 74508.62 0.4853 0.00033282 0.12182 8.3548E-05 0.60713 0.00041637 685.80228094613 690.806441156687 38.285 0.46809 38.285 38.09 38.558 0 177 37 6 0 0 0 1.1889E-22 2 20097 155.11 139.96 1 1.5756 1.7203 0 39175000 16603000 22572000 31222 1804 11862 12185 48665;48666 48666 SGYGFNEPEQSR 12 0 1 Unmodified _SGYGFNEPEQSR_ 0 0 0 Q5BKZ1 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.8028 2 685.802205 1369.58986 73127.05 0.47717 0.00032725 0.043428 2.9783E-05 0.5206 0.00035703 685.80227779862 690.806466989887 45.367 0.4645 45.367 45.126 45.591 0 156 32 6 0 0 0 0.012993 1 21698 44.612 40.313 1 1.3572 1.1617 0 5985900 2370200 3615700 31223 1804 11862 12185 48667 48667 SGYGFNEPEQSR 12 0 1 Unmodified _SGYGFNEPEQSR_ 0 0 0 Q5BKZ1 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.3038 2 685.802205 1369.58986 74332.61 0.69288 0.00047518 -0.40986 -0.00028108 0.28303 0.0001941 685.801778520867 690.806319627687 45.432 0.65441 45.432 45.22 45.875 0 185 41 6 0 0 0 0.060775 1 21150 30.872 30.639 1 1.2428 1.0646 0 3311800 1431500 1880300 31224 1804 11862 12185 48668 48668 SGYISESENSEISQQVR 17 0 1 Unmodified _SGYISESENSEISQQVR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 961.9529 2 956.947783 1911.88101 64750.71 0.43076 0.00041221 0.065067 6.2266E-05 0.49583 0.00047448 956.947891461633 961.952089101541 58.689 0.39404 58.689 58.447 58.841 0 78 32 4 0 0 0 0.00017208 2 33223 52.576 46.852 1 2.0297 2.0356 0 7931300 3921000 4010200 31225 1984 11863 12186 48669;48670 48669 SGYISESENSEISQQVR 17 0 1 Unmodified _SGYISESENSEISQQVR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.9448 2 956.947783 1911.88101 63588.29 0.49012 0.00046902 0.83024 0.0007945 1.3204 0.0012635 957.449385071953 961.95205560178 57.76 0.14551 57.76 57.676 57.821 0 27 11 5 0 0 0 7.6938E-05 1 33454 64.224 59.334 1 2.0648 2.0809 0 9380300 3215300 6165000 31226 1984 11863 12186 48671 48671 SGYISESENSEISQQVR 17 0 1 Unmodified _SGYISESENSEISQQVR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 961.9507 2 956.947783 1911.88101 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.667 1 57.667 57.167 58.167 0 0 0 0 8.1002E-05 1 33412 81.494 73.189 1 31227 1984 11863 12186 48672 48672 SGYISESENSEISQQVR 17 0 1 Unmodified _SGYISESENSEISQQVR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 956.9493 2 956.947783 1911.88101 62920.39 0.074816 7.1595E-05 -0.12951 -0.00012394 -0.054696 -5.2342E-05 957.950011292896 961.952440208026 69.061 0.38547 69.061 68.88 69.266 0 127 25 7 0 0 0 0.0037171 1 36163 35.809 35.809 1 3.6174 3.1037 0 6255800 1431400 4824400 31228 1984 11863 12186 48673 48673 SGYISESENSEISQQVR 17 0 1 Unmodified _SGYISESENSEISQQVR_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 962.454 2 956.947783 1911.88101 62812.36 0.17228 0.00016487 -0.14554 -0.00013927 0.026748 2.5596E-05 957.448741029327 961.952333229007 69.723 0.4257 69.723 69.523 69.948 0 125 29 7 0 0 0 0.008757 1 35732 32.567 31.732 1 3.421 2.8383 0 5382300 1365200 4017200 31229 1984 11863 12186 48674 48674 SGYSLNFSEGDGR 13 0 1 Unmodified _SGYSLNFSEGDGR_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.3094 2 694.807488 1387.60042 NaN NaN NaN 0.022151 1.539E-05 NaN NaN NaN NaN 67.312 0.47618 67.312 67.07 67.546 0 0 0 0 0.026995 1 38877 44.299 39.516 1 NaN NaN 0 6512600 6512600 0 31230 1260 11864 12187 48675 48675 SGYSLNFSEGDGR 13 0 1 Unmodified _SGYSLNFSEGDGR_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.8124 2 694.807488 1387.60042 76046.77 0.63632 0.00044212 -0.37388 -0.00025977 0.26244 0.00018234 694.807312394122 699.811414030611 66.216 0.39541 66.216 66.043 66.439 0 116 31 6 0 0 0 0.0010478 2 39079 59.418 59.418 1 0.90033 0.89154 0 15520000 8507600 7012100 31231 1260 11864 12187 48676;48677 48677 SGYSLNFSEGDGR 13 0 1 Unmodified _SGYSLNFSEGDGR_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.8118 2 694.807488 1387.60042 71789.52 0.3473 0.00024131 0.22263 0.00015468 0.56993 0.00039599 695.309509056777 699.811795875672 77.204 0.48081 77.204 76.972 77.452 0 132 33 5 0 0 0 0.0069187 1 41285 45.653 45.653 1 2.0276 1.6974 0 3947500 1555000 2392500 31232 1260 11864 12187 48678 48678 SGYSLNFSEGDGR 13 0 1 Unmodified _SGYSLNFSEGDGR_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.8074 2 694.807488 1387.60042 73893.49 0.54034 0.00037543 0.20459 0.00014215 0.74493 0.00051758 694.807496177757 699.811835792179 77.637 0.45911 77.637 77.446 77.905 0 122 29 5 0 0 0 0.04502 1 40707 30.331 30.331 1 1.9962 1.7076 0 3278600 1279200 1999400 31233 1260 11864 12187 48679 48679 SHAIFTISLEQR 12 0 1 Unmodified _SHAIFTISLEQR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.8799 2 701.377883 1400.74121 73640.65 0.68198 0.00047832 0.18891 0.00013249 0.87088 0.00061082 701.377996142642 706.382293157999 93.502 0.68696 93.502 93.219 93.906 0 303 46 9 0 0 0 0.00019323 2 52172 83 0 1 0.99976 0.83893 0 25954000 12260000 13693000 31234 1803 11865 12188 48680;48681 48680 SHAIFTISLEQR 12 0 1 Unmodified _SHAIFTISLEQR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.2572 3 467.921014 1400.74121 88279.05 0.30499 0.00014271 0.22091 0.00010337 0.5259 0.00024608 467.92102936398 471.257134666673 93.503 0.57697 93.503 93.254 93.831 7.6294E-06 195 38 9 0 0 0 0.00056793 2 52173 46.88 0 1 1.5991 1.3353 0 10444000 4183300 6260900 31235 1803 11865 12188 48682;48683 48682 SHAIFTISLEQR 12 0 1 Unmodified _SHAIFTISLEQR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 706.3829 2 701.377883 1400.74121 73464.92 0.4238 0.00029724 0.016666 1.1689E-05 0.44046 0.00030893 701.377812825106 706.382185146459 93.171 0.85522 93.171 92.878 93.733 -7.6294E-06 297 53 8 0 0 0 0.00015712 4 51085 92.445 0 1 1.1386 0.97754 0 21393000 8733500 12659000 31236 1803 11865 12188 48684;48685;48686;48687 48685 SHAIFTISLEQR 12 0 1 Unmodified _SHAIFTISLEQR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.2576 3 467.921014 1400.74121 88893.08 0.15149 7.0883E-05 -0.0028125 -1.316E-06 0.14867 6.9567E-05 467.921015207905 471.257049197713 93.175 0.58406 93.175 92.913 93.497 0 195 35 8 0 0 0 0.0001832 2 51073 55.261 0 1 1.3242 1.0772 0 9801500 3934600 5867000 31237 1803 11865 12188 48688;48689 48688 SHAVACVNQFIISR 14 0 1 Unmodified _SHAVACVNQFIISR_ 0 0 0 A0A024RAM0;Q92973 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.2838 3 534.612075 1600.81439 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.866 1 71.866 71.366 72.366 0 0 0 0 0.0046348 1 43129 71.279 56.677 1 31238 309 11866 12189 48690 48690 SHAVGPQEIR 10 0 1 Unmodified _SHAVGPQEIR_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.2927 2 547.291079 1092.56761 83333.14 0.62657 0.00034291 -0.12403 -6.7882E-05 0.50253 0.00027503 547.291079935376 552.294740630888 21.736 0.39302 21.736 21.482 21.875 1.9073E-06 69 23 6 0 0 0 0.00023762 2 7932 92.838 71.31 1 0.83966 0.87913 0 10858000 5698300 5159600 31239 1053;1268 11867 12190 48691;48692 48692 SHAVGPQEIR 10 0 1 Unmodified _SHAVGPQEIR_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.1968 3 365.196478 1092.56761 99740.98 0.16134 5.8921E-05 -0.11573 -4.2264E-05 0.04561 1.6657E-05 365.196562221279 368.532416749053 21.723 0.17496 21.723 21.626 21.801 0 34 10 6 0 0 0 0.00341 1 7965 42.718 33.36 1 1.001 1.0619 0 3814800 1789200 2025600 31240 1053;1268 11867 12190 48693 48693 SHAVGPQEIR 10 0 1 Unmodified _SHAVGPQEIR_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.2946 2 547.291079 1092.56761 88604.75 0.31928 0.00017474 -0.71249 -0.00038994 -0.39322 -0.0002152 547.290803650416 552.294536863151 23.295 0.44046 23.295 23.1 23.541 -1.9073E-06 73 21 4 0 0 0 0.049193 1 7860 36.334 35.358 1 1.2479 1.1076 0 1305100 508440 796710 31241 1053;1268 11867 12190 48694 48694 SHAVGPQEIR 10 0 1 Unmodified _SHAVGPQEIR_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 552.2955 2 547.291079 1092.56761 81847.85 0.30722 0.00016814 -0.48033 -0.00026288 -0.17311 -9.4743E-05 547.290772699792 552.294685616079 23.072 0.39217 23.072 22.867 23.26 0 70 17 6 0 0 0 0.022046 2 7222 46.001 42.43 1 1.0623 0.92637 0 1470500 709880 760660 31242 1053;1268 11867 12190 48695;48696 48695 SHAVLLVK 8 1 0 Unmodified _SHAVLLVK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 437.7835 2 433.776545 865.538538 92681.3 -0.15605 -6.7692E-05 -0.031804 -1.3796E-05 -0.18786 -8.1487E-05 433.776386814181 437.783563619099 34.326 0.57574 34.326 34.046 34.621 0 161 48 6 0 0 0 0.0044591 1 17160 93.561 39.882 1 0.92498 0.94717 0 28445000 13614000 14831000 31243 1745 11868 12191 48697 48697 SHAVLLVK 8 1 0 Unmodified _SHAVLLVK_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 437.783 2 433.776545 865.538538 95561.69 -0.38256 -0.00016594 -0.36542 -0.00015851 -0.74798 -0.00032446 433.776781740761 437.783313786527 36.165 0.33131 36.165 36.035 36.367 0 97 29 4 0 0 0 0.016751 1 16156 60.895 33.409 1 1.7818 1.4072 0 5263400 1858400 3405000 31244 1745 11868 12191 48698 48698 SHDTTSNTLAQLLAK 15 1 0 Unmodified _SHDTTSNTLAQLLAK_ 0 0 0 E9PIE3;Q969G5 E9PIE3 E9PIE3 PRKCDBP Protein kinase C delta-binding protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.4214 2 800.420476 1598.8264 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.581 1 82.581 82.081 83.081 0 0 0 0 0.010547 1 50553 47.352 32.932 1 31245 1239 11869 12192 48699 48699 SHEGETAYIR 10 0 1 Unmodified _SHEGETAYIR_ 0 0 0 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.7783 2 581.778002 1161.54145 77966.53 0.58011 0.00033749 0.22313 0.00012981 0.80323 0.0004673 581.778200719099 586.782408804878 22.216 0.87339 22.216 21.875 22.748 -1.9073E-06 353 53 10 0 0 0 7.1995E-31 3 8332 186.16 153.8 1 1.3159 1.5566 0 302740000 128260000 174480000 31246 1333 11870 12193 48700;48701;48702 48702 SHEGETAYIR 10 0 1 Unmodified _SHEGETAYIR_ 0 0 0 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 391.5239 3 388.18776 1161.54145 96956.98 0.23195 9.0042E-05 0.18729 7.2705E-05 0.41925 0.00016275 388.187839710059 391.523914482514 22.212 0.57509 22.212 22.055 22.63 1.9073E-06 98 34 7 0 0 0 5.9355E-05 1 8348 81.338 74.449 1 1.3376 1.3926 0 21817000 9187100 12630000 31247 1333 11870 12193 48703 48703 SHEGETAYIR 10 0 1 Unmodified _SHEGETAYIR_ 0 0 0 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.7783 2 581.778002 1161.54145 78315.25 0.51882 0.00030184 -0.15942 -9.2745E-05 0.3594 0.00020909 581.777977220864 586.78203935586 21.709 0.7983 21.709 21.464 22.263 0 178 28 9 0 0 0 5.5465E-23 1 7709 174.02 146.89 1 1.344 1.5599 0 334710000 146930000 187790000 31248 1333 11870 12193 48704 48704 SHEGETAYIR 10 0 1 Unmodified _SHEGETAYIR_ 0 0 0 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 391.524 3 388.18776 1161.54145 94951.66 0.16824 6.5308E-05 -0.10924 -4.2408E-05 0.058992 2.29E-05 388.187564486716 391.523784341322 21.707 0.39889 21.707 21.516 21.915 0 93 19 6 0 0 0 0.0036671 1 7715 42.336 35.448 1 1.248 1.3257 0 24089000 11006000 13083000 31249 1333 11870 12193 48705 48705 SHEGETAYIR 10 0 1 Unmodified _SHEGETAYIR_ 0 0 0 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.7822 2 581.778002 1161.54145 78032.66 0.47619 0.00027703 -0.012797 -7.4452E-06 0.46339 0.00026959 581.77794438091 586.782085065143 24.02 0.71217 24.02 23.841 24.553 0 194 40 9 0 0 0 3.0589E-08 2 8333 119.75 91.573 1 0.7519 0.63898 0 34109000 18803000 15306000 31250 1333 11870 12193 48706;48707 48707 SHEGETAYIR 10 0 1 Unmodified _SHEGETAYIR_ 0 0 0 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.7825 2 581.778002 1161.54145 79068.58 0.34298 0.00019954 0.42784 0.00024891 0.77081 0.00044844 581.778146786434 586.782410295821 23.82 0.84842 23.82 23.597 24.446 -1.9073E-06 255 51 9 0 0 0 0.00022723 2 7647 93.178 59.381 1 0.77835 0.67897 0 28074000 15688000 12386000 31251 1333 11870 12193 48708;48709 48709 SHEGETSYIR 10 0 1 Unmodified _SHEGETSYIR_ 0 0 0 Q13242;A8K3M9 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.7795 2 589.775459 1177.53637 76734.59 0.19304 0.00011385 -0.55091 -0.00032491 -0.35787 -0.00021106 590.276837414094 594.779566232045 22.243 0.48235 22.243 22.069 22.552 0 79 21 6 0 0 0 0.0006376 1 6592 83.647 54.729 1 0.88929 0.76053 0 3271900 1112300 2159600 31252 1709 11871 12194 48710 48710 SHFIVALK 8 1 0 Unmodified _SHFIVALK_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRJ2 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.7762 2 457.776545 913.538538 91230.83 0.20494 9.3815E-05 -0.15383 -7.0421E-05 0.051102 2.3393E-05 457.776514865098 461.783519077306 53.835 1.404 53.835 53.176 54.579 0 524 129 6 0 0 0 0.0078606 1 30531 81.119 55.5 1 1.0725 1.2014 0 111410000 55044000 56366000 31253 881;1967 11872 12195 48711 48711 SHFIVALK 8 1 0 Unmodified _SHFIVALK_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRJ2 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.7832 2 457.776545 913.538538 88536.52 0.027783 1.2719E-05 0.031193 1.4279E-05 0.058976 2.6998E-05 457.776458434232 461.783533799213 63.445 2.0847 63.445 62.823 64.908 0 654 172 7 0 0 0 0.013762 2 32790 64.567 49.785 1 2.1354 1.7298 0 24241000 7879500 16361000 31254 881;1967 11872 12195 48712;48713 48713 SHFIVALK 8 1 0 Unmodified _SHFIVALK_ 0 0 0 B2RC06;J3KT86;Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRJ2 B2RC06;Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 461.7838 2 457.776545 913.538538 90104.89 -0.14306 -6.549E-05 0.040619 1.8595E-05 -0.10244 -4.6896E-05 457.776493850338 461.783567459326 63.069 2.318 63.069 62.406 64.724 0 618 195 7 0 0 0 0.0022722 2 31557 101.28 70.672 1 2.0239 1.6215 0 20010000 5635400 14375000 31255 881;1967 11872 12195 48714;48715 48714 SHGFAAEFK 9 1 0 Unmodified _SHGFAAEFK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.2422 2 497.243067 992.47158 87071.63 0.1638 8.1449E-05 0.10217 5.0801E-05 0.26597 0.00013225 497.243064807384 501.250364246399 38.673 0.41775 38.673 38.417 38.835 3.8147E-06 81 28 5 0 0 0 0.049326 1 17557 38.303 22.149 1 1.0135 0.84537 0 1722100 865870 856180 31256 5 11873 12196 48716 48716 SHGIDLDHNR 10 0 1 Unmodified _SHGIDLDHNR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 388.5231 3 388.523254 1162.54793 95387.12 0.23635 9.1829E-05 -0.16978 -6.5965E-05 0.06657 2.5864E-05 388.523193468302 391.859168766452 19.756 0.29501 19.756 19.638 19.933 0 75 14 8 0 0 0 8.5261E-05 2 6250 91.549 78.973 1 0.85159 0.87116 0 34076000 18805000 15270000 31257 2070 11874 12197 48717;48718 48718 SHGIDLDHNR 10 0 1 Unmodified _SHGIDLDHNR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.2848 2 582.281243 1162.54793 78668.15 0.53026 0.00030876 -0.93018 -0.00054163 -0.39992 -0.00023287 582.279868005321 587.284778960648 19.76 0.24046 19.76 19.692 19.933 1.9073E-06 36 10 5 0 0 0 0.0020347 1 6271 70.929 65.27 1 0.90301 0.91865 0 7236500 3764700 3471800 31258 2070 11874 12197 48719 48719 SHGIDLDHNR 10 0 1 Unmodified _SHGIDLDHNR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9J578;C9JVD8 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 388.5233 3 388.523254 1162.54793 99391.43 0.25306 9.8321E-05 0.084648 3.2888E-05 0.33771 0.00013121 388.52318045892 391.859427681308 18.656 0.49027 18.656 18.435 18.926 0 122 30 5 0 0 0 2.4007E-06 2 5309 106.88 102.83 1 0.7841 0.8583 0 33003000 17038000 15965000 31259 2070 11874 12197 48720;48721 48720 SHILPHPVVVADLLK 15 1 0 Unmodified _SHILPHPVVVADLLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.9976 3 546.662764 1636.96646 81341.03 0.69474 0.00037979 0.48507 0.00026517 1.1798 0.00064496 546.997268898802 549.334361283094 109.01 0.37848 109.01 108.85 109.23 -7.6294E-06 109 18 8 0 0 0 5.1476E-06 2 62724 87.932 87.932 1 1.4661 1.1778 0 7817700 3331400 4486300 31260 1392 11875 12198 48722;48723 48723 SHILPHPVVVADLLK 15 1 0 Unmodified _SHILPHPVVVADLLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.9976 3 546.662764 1636.96646 80703.78 0.56578 0.00030929 -0.027981 -1.5296E-05 0.5378 0.000294 546.662754900642 549.334152949551 108.17 0.48226 108.17 108.01 108.49 0 92 22 5 0 0 0 1.4004E-07 2 61173 103.39 103.39 1 1.429 1.1786 0 12036000 4764000 7272100 31261 1392 11875 12198 48724;48725 48725 SHILTHAK 8 1 0 Unmodified _SHILTHAK_ 0 0 0 P25490;H0YJV7 P25490 P25490 YY1 Transcriptional repressor protein YY1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.5629 2 453.761426 905.5083 90165.66 -0.33363 -0.00015139 -0.023239 -1.0545E-05 -0.35687 -0.00016193 453.761110642178 457.768472391395 15.102 0.18941 15.102 14.944 15.133 0 12 4 5 0 0 0 0.040852 1 2858 47.082 47.082 1 0.81352 0.83198 0 10514000 5538900 4974700 31262 1516 11876 12199 48726 48726 SHILTHAK 8 1 0 Unmodified _SHILTHAK_ 0 0 0 P25490;H0YJV7 P25490 P25490 YY1 Transcriptional repressor protein YY1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.7687 2 453.761426 905.5083 91965.91 0.42 0.00019058 0.087904 3.9887E-05 0.5079 0.00023047 453.761257276362 457.768613973544 16.529 0.22456 16.529 16.406 16.63 0 30 10 5 0 0 0 0.031343 1 3866 51.346 51.346 1 0.6646 0.71038 0 3614000 2166800 1447200 31263 1516 11876 12199 48727 48727 SHIPGSETDR 10 0 1 Unmodified _SHIPGSETDR_ 0 0 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.7665 2 549.762352 1097.51015 82259.06 0.44349 0.00024382 -0.48075 -0.0002643 -0.037255 -2.0482E-05 549.762060610647 554.766341295564 16.701 0.3582 16.701 16.604 16.962 0 42 12 6 0 0 0 0.0022766 1 3989 69.825 63.721 1 0.92302 0.94783 0 6454200 3289200 3165000 31264 2068 11877 12200 48728 48728 SHISDQSPLSSK 12 1 0 Unmodified _SHISDQSPLSSK_ 0 0 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.8254 2 643.322773 1284.63099 NaN NaN NaN -0.19631 -0.00012629 NaN NaN NaN NaN 24.156 0.36051 24.156 23.976 24.337 0 0 0 0 2.5338E-05 2 9899 100.04 81.365 1 NaN NaN 0 6816400 6816400 0 31265 1562 11878 12201 48729;48730 48729 SHISDQSPLSSK 12 1 0 Unmodified _SHISDQSPLSSK_ 0 0 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.3224 2 643.322773 1284.63099 75922.31 0.54663 0.00035166 0.049154 3.1622E-05 0.59578 0.00038328 643.322721884053 647.329844852003 23.609 0.35087 23.61 23.467 23.818 1.9073E-06 51 13 7 0 0 0 3.8341E-29 2 9449 164.48 123.6 1 1.2225 1.289 0 23756000 10427000 13328000 31266 1562 11878 12201 48731;48732 48731 SHISDQSPLSSK 12 1 0 Unmodified _SHISDQSPLSSK_ 0 0 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.3315 2 643.322773 1284.63099 77078.25 0.4458 0.00028679 -0.079513 -5.1152E-05 0.36628 0.00023564 643.322433450306 647.329815119096 26.337 0.31144 26.337 26.19 26.502 0 59 13 6 0 0 0 0.021812 1 9400 38.402 27.573 1 1.2666 1.0842 0 1414600 649790 764840 31267 1562 11878 12201 48733 48733 SHLFFTAGK 9 1 0 Unmodified _SHLFFTAGK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.2693 2 504.269084 1006.52362 84566.49 0.57187 0.00028837 0.27737 0.00013987 0.84924 0.00042824 504.269158939072 508.27621057678 49.321 0.60708 49.321 49.042 49.649 0 191 40 6 0 0 0 7.7315E-08 2 26990 142.04 81.454 1 0.91135 1.0377 0 170180000 85298000 84885000 31268 1827 11879 12202 48734;48735 48735 SHLFFTAGK 9 1 0 Unmodified _SHLFFTAGK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.2769 2 504.269084 1006.52362 84288.33 0.34097 0.00017194 -0.09493 -4.787E-05 0.24604 0.00012407 504.269188995313 508.276052265518 47.043 1.0804 47.043 46.419 47.5 0 331 87 6 0 0 0 2.048E-05 2 25862 117.81 47.385 1 0.94607 1.0666 0 67502000 33885000 33617000 31269 1827 11879 12202 48736;48737 48736 SHLFFTAGK 9 1 0 Unmodified _SHLFFTAGK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 508.2764 2 504.269084 1006.52362 84632.07 0.3958 0.00019959 0.32906 0.00016594 0.72487 0.00036553 504.26926366186 508.276105641072 54.972 1.3629 54.972 54.589 55.952 3.8147E-06 359 88 8 0 0 0 0.014178 1 27352 55.908 15.907 1 1.3295 1.0332 0 15208000 6730300 8478100 31270 1827 11879 12202 48738 48738 SHLFFTAGK 9 1 0 Unmodified _SHLFFTAGK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 508.2762 2 504.269084 1006.52362 NaN NaN NaN 0.84381 0.00042551 NaN NaN NaN NaN 54.743 1.6772 54.743 54.261 55.938 0 0 0 0 0.0036065 1 26635 78.113 29.552 1 NaN NaN 0 8521500 0 8521500 31271 1827 11879 12202 48739 48739 SHLIQVER 8 0 1 Unmodified _SHLIQVER_ 0 0 0 A4D218;Q9Y6D9;C9JJ38 A4D218 A4D218 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.2813 2 491.277441 980.540328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.668 1 26.668 26.168 27.168 0 0 0 0 0.052162 1 12058 53.968 4.2528 1 31272 668 11880 12203 48740 48740 SHLLSSSDAEGNYR 14 0 1 Unmodified _SHLLSSSDAEGNYR_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.3565 2 768.357876 1534.7012 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.178 1 31.178 30.678 31.678 -1.9073E-06 0 0 0 0.002706 1 15362 60.49 41.71 1 31273 1224 11881 12204 48741 48741 SHLLSSSDAEGNYR 14 0 1 Unmodified _SHLLSSSDAEGNYR_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.3604 2 768.357876 1534.7012 NaN NaN NaN 0.85123 0.00065405 NaN NaN NaN NaN 29.811 0.11207 29.811 29.774 29.886 0 0 0 0 0.004866 1 14508 57.164 46 1 NaN NaN 0 2417900 2417900 0 31274 1224 11881 12204 48742 48742 SHPLDPIDTVDFER 14 0 1 Unmodified _SHPLDPIDTVDFER_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;A0A1B0GVU9;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;B7Z840;A0A0U1RQT0;A0A0U1RRI9;A0A0U1RQE9;A0A0U1RQL2;C9J165 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.2741 3 547.60201 1639.7842 84098.13 0.38962 0.00021335 0.46662 0.00025552 0.85623 0.00046887 547.602164262302 550.938344173236 85.368 0.5567 85.368 85.006 85.563 0 130 46 5 0 0 0 0.0081416 1 52479 32.127 21.846 1 1.5328 1.5381 0 11232000 5544900 5687500 31275 1575 11882 12205 48743 48743 SHPLPETAVR 10 0 1 Unmodified _SHPLPETAVR_ 0 0 0 Q68CN2;Q71SV8;Q9HCS7 Q68CN2 Q68CN2 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.8013 2 553.80128 1105.58801 80987.64 0.37458 0.00020744 -0.49608 -0.00027473 -0.1215 -6.7286E-05 553.801220082483 558.805332520035 25.293 0.4069 25.293 25.084 25.49 0 41 15 5 0 0 0 0.0026779 2 10913 67.993 52.331 1 1.132 1.1473 0 20168000 9789800 10378000 31276 1838 11883 12206 48744;48745 48745 SHSECGIIEK 10 1 0 Unmodified _SHSECGIIEK_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6;E9PJ60 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.2742 2 580.274238 1158.53392 NaN NaN NaN -0.22549 -0.00013085 NaN NaN NaN NaN 20.511 0.19587 20.511 20.432 20.627 0 0 0 0 0.002026 1 6970 82.75 39.668 1 NaN NaN 0 3286700 3286700 0 31277 1901 11884 12207 48746 48746 SHSIFSIR 8 0 1 Unmodified _SHSIFSIR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.7631 2 473.758884 945.503215 89084.08 0.12783 6.056E-05 0.32606 0.00015448 0.45389 0.00021504 473.758837992629 478.763060092391 49.03 0.5809 49.03 48.857 49.438 0 142 50 5 0 0 0 0.0027401 1 27533 98.997 57.494 1 0.68937 0.79816 0 67301000 35888000 31412000 31278 1421 11885 12208 48747 48747 SHSIFSIR 8 0 1 Unmodified _SHSIFSIR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.7589 2 473.758884 945.503215 87616.14 0.21001 9.9495E-05 0.34028 0.00016121 0.55029 0.00026071 473.758811860651 478.763049654366 58.32 0.75762 58.32 58.018 58.775 3.8147E-06 289 56 7 0 0 0 0.0076006 2 29608 82.241 66.801 1 1.2662 1.0585 0 24033000 10064000 13969000 31279 1421 11885 12208 48748;48749 48749 SHSIFSIR 8 0 1 Unmodified _SHSIFSIR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.7588 2 473.758884 945.503215 85959.72 0.28755 0.00013623 -0.44481 -0.00021073 -0.15726 -7.4503E-05 473.758808421781 478.76285993261 58.169 0.7934 58.169 57.842 58.635 3.8147E-06 345 58 9 0 0 0 0.0092293 2 28932 75.213 56.43 1 1.0369 0.90452 0 25496000 12663000 12832000 31280 1421 11885 12208 48750;48751 48751 SHSLFLTQK 9 1 0 Unmodified _SHSLFLTQK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.8007 2 530.792924 1059.57129 83941.09 0.66445 0.00035269 0.43117 0.00022886 1.0956 0.00058155 530.792986068432 534.800032871848 37.016 0.52595 37.016 36.757 37.283 0 146 40 5 0 0 0 0.0014031 1 19090 85.862 69.092 1 1.005 1.0594 0 19891000 10670000 9220700 31281 1795 11886 12209 48752 48752 SHSLFLTQK 9 1 0 Unmodified _SHSLFLTQK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.8002 2 530.792924 1059.57129 82564.41 0.40065 0.00021266 0.21168 0.00011236 0.61233 0.00032502 530.79305748178 534.799896336222 42.984 0.6593 42.984 42.715 43.374 0 184 39 7 0 0 0 0.0021477 1 20124 76.17 59.63 1 1.7564 1.3932 0 4561800 1594000 2967800 31282 1795 11886 12209 48753 48753 SHSPSASQSGSQLR 14 0 1 Unmodified _SHSPSASQSGSQLR_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.8492 2 714.844936 1427.67532 NaN NaN NaN NaN NaN NaN NaN NaN NaN 15.449 1 15.449 14.949 15.949 -9.5367E-07 0 0 0 0.047816 1 3136 40.715 29.564 1 31283 640 11887 12210 48754 48754 SHSTEPGLVLTLGQGDVGQLGLGENVMER 29 0 1 Unmodified _SHSTEPGLVLTLGQGDVGQLGLGENVMER_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 999.1721 3 998.504743 2992.4924 59824.48 0.52722 0.00052644 0.001955 1.9521E-06 0.52918 0.00052839 998.839194901357 1002.17526593087 129.02 0.37282 129.02 128.82 129.2 0 130 17 11 0 0 0 0.032955 2 77966 12.833 12.833 1 1.1616 0.99845 0 6565000 3551700 3013300 31284 550 11888 12211 48755;48756 48756 SHSTEPGLVLTLGQGDVGQLGLGENVMER 29 0 1 Unmodified _SHSTEPGLVLTLGQGDVGQLGLGENVMER_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 998.8393 3 998.504743 2992.4924 60897.43 0.51219 0.00051142 0.628 0.00062706 1.1402 0.0011385 998.838717577547 1002.17635961244 128.77 0.35294 128.77 128.67 129.03 0 41 12 5 0 0 0 1.9164E-11 2 76948 60.382 60.382 1 1.2326 1.0254 0 7356300 3156000 4200300 31285 550 11888 12211 48757;48758 48758 SHSTEPGLVLTLGQGDVGQLGLGENVMER 29 0 1 Oxidation (M) _SHSTEPGLVLTLGQGDVGQLGLGENVM(ox)ER_ SHSTEPGLVLTLGQGDVGQLGLGENVM(1)ER SHSTEPGLVLTLGQGDVGQLGLGENVM(40.46)ER 0 1 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1004.5048 3 1003.83638 3008.48731 60452.75 0.5192 0.00052119 -0.1875 -0.00018822 0.3317 0.00033298 1004.17070473727 1007.50650834191 122.95 0.3522 122.95 122.8 123.16 0 142 16 13 0 0 0 5.5851E-07 1 72484 40.456 40.456 1 0.58417 0.50957 0 29897000 16710000 13187000 31286 550 11888 12212 48759 48759 404 SHSVFNIK 8 1 0 Unmodified _SHSVFNIK_ 0 0 0 H7BYN4;Q02241;H0YME6;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.2608 2 466.253434 930.492316 NaN NaN NaN 0.11735 5.4714E-05 NaN NaN NaN NaN 36.385 0.27001 36.385 36.183 36.453 0 0 0 0 0.024982 1 18396 62.338 35.217 1 NaN NaN 0 4493200 0 4493200 31287 1312 11889 12213 48760 48760 SHTILLVQPTK 11 1 0 Acetyl (Protein N-term) _(ac)SHTILLVQPTK_ 1 0 0 A0A024R6D4;P84090;G3V279 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.8745 2 639.874445 1277.73434 75738.03 0.667 0.0004268 -0.0031063 -1.9877E-06 0.6639 0.00042481 639.874531972732 643.881540527263 80.914 0.89143 80.914 80.664 81.555 0 486 75 10 0 0 0 1.2099E-79 2 48070 232.41 213.63 1 0.93913 1.1031 0 308040000 146250000 161790000 31288 201 11890 12214 48761;48762 48762 SHTILLVQPTK 11 1 0 Acetyl (Protein N-term) _(ac)SHTILLVQPTK_ 1 0 0 A0A024R6D4;P84090;G3V279 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8749 2 639.874445 1277.73434 75667.52 0.77561 0.0004963 0.11404 7.2971E-05 0.88965 0.00056927 639.874630140965 643.88157702722 79.938 0.94359 79.938 79.56 80.504 0 437 75 10 0 0 0 2.5274E-131 2 48501 269.59 244.03 1 1.0098 1.186 0 349410000 177130000 172290000 31289 201 11890 12214 48763;48764 48764 SHTILLVQPTK 11 1 0 Acetyl (Protein N-term) _(ac)SHTILLVQPTK_ 1 0 0 A0A024R6D4;P84090;G3V279 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.8746 2 639.874445 1277.73434 75431.04 0.58718 0.00037572 0.23565 0.00015078 0.82283 0.0005265 639.874475118706 643.881455112227 92.431 0.78962 92.431 91.949 92.738 0 230 41 9 0 0 0 0.00035667 2 51348 92.239 92.239 1 0.67843 0.55177 0 29803000 16993000 12811000 31290 201 11890 12214 48765;48766 48766 SHTILLVQPTK 11 1 0 Acetyl (Protein N-term) _(ac)SHTILLVQPTK_ 1 0 0 A0A024R6D4;P84090;G3V279 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.8819 2 639.874445 1277.73434 75310.82 0.42298 0.00027065 -0.065122 -4.167E-05 0.35785 0.00022898 639.874440519339 643.881428263872 92.205 0.75591 92.205 91.829 92.585 0 242 39 9 0 0 0 0.00030146 2 50350 93.667 93.667 1 0.73405 0.6043 0 28582000 16394000 12188000 31291 201 11890 12214 48767;48768 48768 SHTVAGGGSGDHSHQVR 17 0 1 Acetyl (Protein N-term) _(ac)SHTVAGGGSGDHSHQVR_ 1 0 0 B5BUK7;B2RCZ4 B5BUK7 B5BUK7 PRKCI Protein kinase C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.9394 3 577.603295 1729.78806 79957.81 0.0013147 7.5937E-07 0.095782 5.5324E-05 0.097097 5.6084E-05 577.60329255559 580.939463889759 14.885 0.13188 14.885 14.829 14.961 0 37 8 6 0 0 0 1.8285E-05 1 2626 71.08 62.903 1 1.2761 1.4122 0 1550700 704320 846380 31292 884 11891 12215 48769 48769 SHTVVIGFGPSELQELGK 18 1 0 Unmodified _SHTVVIGFGPSELQELGK_ 0 0 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3398 3 633.338786 1896.99453 77370.3 0.73127 0.00046314 0.10195 6.457E-05 0.83322 0.00052771 633.673143460437 636.010552603402 104.51 0.94739 104.51 104.04 104.99 0 279 78 6 0 0 0 1.3354E-05 2 64483 60.062 60.062 1 0.94586 0.96981 0 13029000 8269400 4759400 31293 1928 11892 12216 48770;48771 48770 SHTVVIGFGPSELQELGK 18 1 0 Unmodified _SHTVVIGFGPSELQELGK_ 0 0 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.0112 3 633.338786 1896.99453 77718.4 0.82749 0.00052408 0.3004 0.00019025 1.1279 0.00071433 633.673058854765 636.344774442756 102.86 0.772 102.86 102.52 103.29 0 171 62 4 0 0 0 2.861E-08 3 64894 75.548 75.548 1 0.76853 0.83235 0 22094000 9210300 12884000 31294 1928 11892 12216 48772;48773;48774 48773 SHTVVIGFGPSELQELGK 18 1 0 Unmodified _SHTVVIGFGPSELQELGK_ 0 0 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.6735 3 633.338786 1896.99453 NaN NaN NaN -1.0672 -0.00067589 NaN NaN NaN NaN 114.68 0.7223 114.68 114.33 115.05 0 0 0 0 0.00019859 1 66101 56.313 50.015 1 NaN NaN 0 4395800 4395800 0 31295 1928 11892 12216 48775 48775 SHVYSLEGQDCK 12 1 0 Unmodified _SHVYSLEGQDCK_ 0 0 0 H7BXF4;B1PBA3;Q9NXE4;H7C2J2;H7C0W5;B4E0T5;H7C1Q6 H7BXF4 H7BXF4 SMPD4 Sphingomyelin phosphodiesterase 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.8203 2 711.819541 1421.62453 NaN NaN NaN -0.46005 -0.00032747 NaN NaN NaN NaN 24.716 0.18037 24.716 24.655 24.835 1.9073E-06 0 0 0 0.050843 1 10432 41.704 35.114 1 NaN NaN 0 1445100 1445100 0 31296 822 11893 12217 48776 48776 SIAEGIGPEER 11 0 1 Unmodified _SIAEGIGPEER_ 0 0 0 Q9HBB9;Q8WUM5;Q9HC39;I3L2C7;P57678 Q9HBB9 Q9HBB9 GEMIN4 Gem-associated protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.2938 2 579.293485 1156.57242 NaN NaN NaN 0.050242 2.9105E-05 NaN NaN NaN NaN 43.556 0.6209 43.556 43.153 43.774 0 0 0 0 0.0020167 1 23714 78.655 56.569 1 NaN NaN 0 15401000 15401000 0 31297 1940 11894 12218 48777 48777 SIAEGIGPEER 11 0 1 Unmodified _SIAEGIGPEER_ 0 0 0 Q9HBB9;Q8WUM5;Q9HC39;I3L2C7;P57678 Q9HBB9 Q9HBB9 GEMIN4 Gem-associated protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.2973 2 579.293485 1156.57242 79145.61 0.21614 0.00012521 0.56241 0.0003258 0.77855 0.00045101 579.293489931775 584.297868438789 51.427 0.43819 51.427 51.205 51.643 0 77 27 4 0 0 0 0.024824 1 24702 41.54 41.54 1 1.2069 1.0547 0 1410000 637490 772480 31298 1940 11894 12218 48778 48778 SIAFHSAVSLDPIK 14 1 0 Unmodified _SIAFHSAVSLDPIK_ 0 0 0 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.9164 2 742.909016 1483.80348 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.075 1 89.075 88.575 89.575 7.6294E-06 0 0 0 0.040666 1 53764 41.689 26.545 1 31299 2136 11895 12219 48779 48779 SIAFHSAVSLDPIK 14 1 0 Unmodified _SIAFHSAVSLDPIK_ 0 0 0 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.2795 3 495.608436 1483.80348 NaN NaN NaN -1.5811 -0.00078361 NaN NaN NaN NaN 87.59 0.81095 87.59 87.044 87.854 0 0 0 0 0.00036288 1 53947 73.022 60.145 1 NaN NaN 0 12934000 0 12934000 31300 2136 11895 12219 48780 48780 SIAFHSAVSLDPIK 14 1 0 Unmodified _SIAFHSAVSLDPIK_ 0 0 0 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.6122 3 495.608436 1483.80348 NaN NaN NaN -1.0088 -0.00049998 NaN NaN NaN NaN 100.99 0.41071 100.99 100.8 101.21 0 0 0 0 0.035914 1 57136 29.341 18.07 1 NaN NaN 0 1929400 0 1929400 31301 2136 11895 12219 48781 48781 SIAFPSIGSGR 11 0 1 Unmodified _SIAFPSIGSGR_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2961 2 546.29583 1090.57711 82420.24 0.52515 0.00028689 -0.0094312 -5.1522E-06 0.51571 0.00028173 546.296230407393 551.299894249887 83.414 1.4757 83.414 83.024 84.499 0 782 122 11 0 0 0 0.00037232 4 50261 83.647 65.738 1 1.0572 1.261 0 2984300000 1460200000 1524200000 31302 1401 11896 12220 48782;48783;48784;48785 48785 SIAFPSIGSGR 11 0 1 Unmodified _SIAFPSIGSGR_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.2968 2 546.29583 1090.57711 80790.31 0.55483 0.0003031 -0.17373 -9.4908E-05 0.38109 0.00020819 546.296115909166 551.299791261635 82.361 1.5367 82.361 81.957 83.494 0 765 125 12 0 0 0 0.00034533 4 50761 85.764 65.978 1 1.0622 1.262 0 2211100000 1061300000 1149800000 31303 1401 11896 12220 48786;48787;48788;48789 48789 SIAFPSIGSGR 11 0 1 Unmodified _SIAFPSIGSGR_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 546.2958 2 546.29583 1090.57711 81791.52 0.67704 0.00036987 -0.087217 -4.7646E-05 0.58983 0.00032222 546.296003909746 551.299895708652 95.189 2.7461 95.189 94.766 97.512 0 927 172 10 0 0 0 0.0012566 6 53610 68.893 53.231 1 1.1438 0.99512 0 304240000 143980000 160260000 31304 1401 11896 12220 48790;48791;48792;48793;48794;48795 48793 SIAFPSIGSGR 11 0 1 Unmodified _SIAFPSIGSGR_ 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.2963 2 546.29583 1090.57711 81844.45 0.50147 0.00027395 0.14644 7.9997E-05 0.64791 0.00035395 546.296063742584 551.30000212271 95.092 2.1567 95.092 94.502 96.658 0 789 141 10 0 0 0 0.0020164 6 52729 63.076 46.873 1 1.1464 1.0015 0 236300000 108910000 127400000 31305 1401 11896 12220 48796;48797;48798;48799;48800;48801 48799 SIAGIDQWLEVFCEQEEK 18 1 0 Unmodified _SIAGIDQWLEVFCEQEEK_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPJ1;D2CPJ3;D2CPJ4;D2CPJ5;D2CPJ9;D2CPK5;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1091.5861 2 1091.01207 2180.00958 NaN NaN NaN 0.6868 0.00074931 NaN NaN NaN NaN 133.46 0.18175 133.46 133.32 133.5 0 0 0 0 0.0039847 1 87435 66.989 54.428 1 NaN NaN 0 4950700 4950700 0 31306 118;1184 11897 12221 48802 48802 SIASAYFSPLTGNR 14 0 1 Unmodified _SIASAYFSPLTGNR_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.9335 2 742.380623 1482.74669 69275.32 0.82522 0.00061263 -0.98484 -0.00073113 -0.15963 -0.0001185 742.379500569299 747.383581742716 96.799 0.67368 96.799 96.459 97.133 0 142 58 4 0 0 0 0.038472 1 59173 46.73 33.775 1 0.5259 0.52821 0 17236000 9788100 7448400 31307 508 11898 12222 48803 48803 SIASAYFSPLTGNR 14 0 1 Unmodified _SIASAYFSPLTGNR_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3851 2 742.380623 1482.74669 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.213 1 96.213 95.713 96.713 0 0 0 0 0.0092154 1 59992 52.247 36.618 1 31308 508 11898 12222 48804 48804 SIASAYFSPLTGNR 14 0 1 Unmodified _SIASAYFSPLTGNR_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.7065 2 742.380623 1482.74669 67600.52 0.88587 0.00065765 -1.3451 -0.00099859 -0.45924 -0.00034093 742.379447894658 747.383492008755 95.963 0.82326 95.963 95.609 96.432 0 204 70 5 0 0 0 0.0012387 1 59839 78.692 53.839 1 0.62347 0.68208 0 30689000 17860000 12829000 31309 508 11898 12222 48805 48805 SIASAYFSPLTGNR 14 0 1 Unmodified _SIASAYFSPLTGNR_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.3821 2 742.380623 1482.74669 68129.89 0.84025 0.00062379 -0.41404 -0.00030737 0.42622 0.00031642 742.380656871513 747.384737898072 109.72 0.79967 109.72 109.41 110.21 0 135 40 7 0 0 0 0.004513 1 63295 55.452 55.452 1 0.97457 0.82699 0 9243000 4521000 4722000 31310 508 11898 12222 48806 48806 SIASAYFSPLTGNR 14 0 1 Unmodified _SIASAYFSPLTGNR_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.3812 2 742.380623 1482.74669 68927.21 0.80996 0.0006013 0.18724 0.000139 0.9972 0.0007403 742.380888824238 747.385185700283 109.59 0.66039 109.59 109.34 110 0 126 32 8 0 0 0 0.0088358 1 62199 47.288 47.288 1 0.96709 0.79836 0 8207200 4062800 4144400 31311 508 11898 12222 48807 48807 SIATLAITTLLK 12 1 0 Unmodified _SIATLAITTLLK_ 0 0 0 Q9Y678;B3KW21;Q8WUI6;Q9NUP3;B3KND4;Q9H9B7;A0A140VK12;Q9UBF2 Q9Y678 Q9Y678 COPG1;COPG;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma;Coatomer subunit gamma-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.9036 2 622.894846 1243.77514 78096.27 1.1387 0.00070931 -0.061835 -3.8516E-05 1.0769 0.00067079 622.894732892205 626.901795406145 127.09 0.66354 127.09 126.79 127.46 0 166 37 7 0 0 0 2.2866E-05 2 82612 102.06 102.06 1 2.085 2.1509 0 12816000 3394500 9421200 31312 2151 11899 12223 48808;48809 48808 SIATLAITTLLK 12 1 0 Unmodified _SIATLAITTLLK_ 0 0 0 Q9Y678;B3KW21;Q8WUI6;Q9NUP3;B3KND4;Q9H9B7;A0A140VK12;Q9UBF2 Q9Y678 Q9Y678 COPG1;COPG;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma;Coatomer subunit gamma-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8947 2 622.894846 1243.77514 77330.43 0.95416 0.00059434 -0.0038492 -2.3976E-06 0.95031 0.00059194 622.894731071423 626.901848159971 126.55 0.60123 126.55 126.28 126.88 0 181 36 7 0 0 0 3.5535E-06 2 84328 111.06 111.06 1 2.2387 2.3431 0 19392000 6463400 12929000 31313 2151 11899 12223 48810;48811 48811 SIATSPLGLGK 11 1 0 Unmodified _SIATSPLGLGK_ 0 0 0 A0A0U1RQK4 A0A0U1RQK4 A0A0U1RQK4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.314 2 522.308406 1042.60226 81171.41 0.47823 0.00024979 0.24735 0.00012919 0.72558 0.00037898 522.308715053966 526.314449497008 87.94 0.29072 87.94 87.805 88.096 0 63 22 4 0 0 0 0.0051516 2 54240 56.729 24.795 1 0.91307 1.0149 0 50559000 29338000 21221000 31314 589 11900 12224 48812;48813 48812 SIAVAEAACPGITDK 15 1 0 Unmodified _SIAVAEAACPGITDK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;Q96SR7 Q8NBY1 Q8NBY1 STK26;MST4 Serine/threonine-protein kinase 26 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.8338 2 751.879598 1501.74464 70422.61 0.71961 0.00054106 -0.039934 -3.0026E-05 0.67967 0.00051103 751.880268002187 755.886484481178 67.641 0.59221 67.641 67.373 67.965 0 244 49 8 0 0 0 0.02383 1 39244 45.257 45.257 1 1.8058 1.8804 0 29715000 10915000 18800000 31315 1065 11901 12225 48814 48814 SIAVAEAACPGITDK 15 1 0 Unmodified _SIAVAEAACPGITDK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;Q96SR7 Q8NBY1 Q8NBY1 STK26;MST4 Serine/threonine-protein kinase 26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.8874 2 751.879598 1501.74464 71105.06 0.64069 0.00048172 0.42675 0.00032087 1.0674 0.00080259 751.880093471509 755.886819451273 66.587 0.48766 66.587 66.341 66.829 -7.6294E-06 141 40 5 0 0 0 2.3128E-38 1 39317 165.35 165.35 1 1.9625 2.0267 0 18399000 5743700 12655000 31316 1065 11901 12225 48815 48815 SIAVAEAACPGITDK 15 1 0 Unmodified _SIAVAEAACPGITDK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;Q96SR7 Q8NBY1 Q8NBY1 STK26;MST4 Serine/threonine-protein kinase 26 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.3901 2 751.879598 1501.74464 NaN NaN NaN -0.035072 -2.637E-05 NaN NaN NaN NaN 77.581 0.4603 77.581 77.394 77.854 0 0 0 0 0.011871 2 41466 49.423 25.08 1 NaN NaN 0 1204000 0 1204000 31317 1065 11901 12225 48816;48817 48817 SIAVAEAACPGITDK 15 1 0 Unmodified _SIAVAEAACPGITDK_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;Q96SR7 Q8NBY1 Q8NBY1 STK26;MST4 Serine/threonine-protein kinase 26 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 755.8871 2 751.879598 1501.74464 NaN NaN NaN 0.37317 0.00028058 NaN NaN NaN NaN 77.89 0.40085 77.89 77.697 78.098 0 0 0 0 0.00081201 1 40904 67.456 34.228 1 NaN NaN 0 1278300 0 1278300 31318 1065 11901 12225 48818 48818 SICEVLDLER 10 0 1 Unmodified _SICEVLDLER_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;H0Y8X0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3113 2 617.31082 1232.60709 78511.66 0.69867 0.0004313 0.31846 0.00019659 1.0171 0.00062789 617.311076353668 622.315193812551 91.794 1.2155 91.794 91.405 92.62 0 591 109 10 0 0 0 2.253E-09 2 55482 128.36 93.066 1 0.57688 0.68137 0 251820000 160260000 91562000 31319 1546;1018 11902 12226 48819;48820 48820 SICEVLDLER 10 0 1 Unmodified _SICEVLDLER_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;H0Y8X0 B4DNW3;P35659 P35659 DEK Protein DEK MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.33 2 617.31082 1232.60709 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.681 1 92.681 92.181 93.181 0 0 0 0 0.042952 1 56165 46.001 32.948 1 31320 1546;1018 11902 12226 48821 48821 SICEVLDLER 10 0 1 Unmodified _SICEVLDLER_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;H0Y8X0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.3117 2 617.31082 1232.60709 78310.34 0.56472 0.00034861 0.55257 0.00034111 1.1173 0.00068971 617.311248984776 622.315308910234 90.88 1.0565 90.88 90.6 91.656 0 466 87 9 0 0 0 3.8441E-22 2 56142 163.32 120.72 1 0.57095 0.66492 0 439440000 266670000 172770000 31321 1546;1018 11902 12226 48822;48823 48823 SICEVLDLER 10 0 1 Unmodified _SICEVLDLER_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;H0Y8X0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.3109 2 617.31082 1232.60709 73719.84 0.51156 0.00031579 -0.10239 -6.3204E-05 0.40917 0.00025258 617.310941698481 622.314877514438 105.07 1.9108 105.07 104.57 106.48 0 582 110 10 0 0 0 0.00069328 3 59685 82.749 47.454 1 0.82686 0.7156 0 131010000 72818000 58193000 31322 1546;1018 11902 12226 48824;48825;48826 48825 SICEVLDLER 10 0 1 Unmodified _SICEVLDLER_ 0 0 0 B4DNW3;P35659;B4DFG0;D6RDA2;H0Y8X0 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.3129 2 617.31082 1232.60709 72842.13 0.44636 0.00027555 -0.0030179 -1.863E-06 0.44335 0.00027368 617.310969768058 622.314975478939 104.85 1.9535 104.85 104.4 106.36 0 583 121 10 0 0 0 1.4773E-05 4 59186 101.65 66.351 1 0.76649 0.66895 0 78414000 43326000 35088000 31323 1546;1018 11902 12226 48827;48828;48829;48830 48829 SIDAGPVDAWTLAFSPDSQYLATGTHVGK 29 1 0 Unmodified _SIDAGPVDAWTLAFSPDSQYLATGTHVGK_ 0 0 0 H0YN81;Q9GZS3;H0YMF9 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1004.8332 3 1002.16108 3003.46142 61923.91 0.31268 0.00031335 0.064798 6.4938E-05 0.37747 0.00037829 1002.49652492536 1005.16692319489 122.86 0.63515 122.86 122.57 123.2 0 302 47 11 0 0 0 0.0002129 2 79499 32.164 32.164 1 1.3346 1.308 0 21065000 8383100 12682000 31324 1299 11903 12227 48831;48832 48831 SIDAGPVDAWTLAFSPDSQYLATGTHVGK 29 1 0 Unmodified _SIDAGPVDAWTLAFSPDSQYLATGTHVGK_ 0 0 0 H0YN81;Q9GZS3;H0YMF9 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1005.4969 3 1002.16108 3003.46142 62038.25 0.53844 0.0005396 -0.052972 -5.3087E-05 0.48546 0.00048651 1002.49675134137 1005.16681064364 122.37 0.6013 122.37 122.11 122.72 -7.6294E-06 302 47 10 0 0 0 0.00033718 1 81088 29.377 29.377 1 1.2863 1.3917 0 22501000 9270900 13230000 31325 1299 11903 12227 48833 48833 SIDAGPVDAWTLAFSPDSQYLATGTHVGK 29 1 0 Unmodified _SIDAGPVDAWTLAFSPDSQYLATGTHVGK_ 0 0 0 H0YN81;Q9GZS3;H0YMF9 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1005.5013 3 1002.16108 3003.46142 60207.63 0.93115 0.00093317 0.92705 0.00092905 1.8582 0.0018622 1002.49676585569 1005.16730817728 134.32 0.24623 134.32 134.14 134.39 1.5259E-05 69 11 12 0 0 0 3.9425E-07 1 81976 44.264 44.264 1 1.0891 0.86449 0 18983000 8755100 10228000 31326 1299 11903 12227 48834 48834 SIDGTADDEDEGVPTDQAIR 20 0 1 Unmodified _SIDGTADDEDEGVPTDQAIR_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1052.9703 2 1052.46928 2102.924 60525.55 0.57763 0.00060793 -0.02364 -2.488E-05 0.55399 0.00058305 1052.97034937943 1057.47332984904 65.604 0.43945 65.604 65.391 65.831 0 136 39 5 0 0 0 9.0063E-05 3 37727 44.511 37.824 1 0.73275 0.76103 0 13587000 8627000 4960500 31327 2069 11904 12228 48835;48836;48837 48837 SIDGTADDEDEGVPTDQAIR 20 0 1 Unmodified _SIDGTADDEDEGVPTDQAIR_ 0 0 0 Q9NTI5;B7Z5S1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1052.9718 2 1052.46928 2102.924 61966.9 0.50279 0.00052917 -0.12995 -0.00013677 0.37284 0.00039241 1052.97048301715 1057.97503770071 64.729 0.45799 64.729 64.45 64.908 0 163 40 6 0 0 0 0.00015459 4 38122 40.552 39.509 1 0.69804 0.69633 0 11618000 7820000 3797700 31328 2069 11904 12228 48838;48839;48840;48841 48841 SIDISATIPK 10 1 0 Unmodified _SIDISATIPK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.8011 2 522.800414 1043.58628 83594.39 0.25687 0.00013429 0.20328 0.00010627 0.46015 0.00024057 522.800504442013 526.807601766399 81.149 1.1126 81.149 80.734 81.847 0 447 95 8 0 0 0 0.0035438 2 48351 64.04 39.885 1 0.80193 0.91809 0 188550000 105920000 82629000 31329 740 11905 12229 48842;48843 48842 SIDISATIPK 10 1 0 Unmodified _SIDISATIPK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.8075 2 522.800414 1043.58628 83539.49 0.51916 0.00027142 -0.0082883 -4.3332E-06 0.51087 0.00026708 522.800399292809 526.807550631719 80.09 1.0291 80.09 79.763 80.792 0 411 82 8 0 0 0 0.0015298 2 48806 73.233 41.93 1 0.80572 0.93831 0 246080000 130830000 115250000 31330 740 11905 12229 48844;48845 48845 SIDISATIPK 10 1 0 Unmodified _SIDISATIPK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1052.1091 1 1044.59355 1043.58628 61613.26 0.67458 0.00070466 0.058534 6.1144E-05 0.73311 0.0007658 1044.59373305587 1052.60776848977 80.066 0.41312 80.066 79.928 80.341 0 88 31 5 0 0 0 0.016447 1 48886 60.436 46.857 1 0.87111 0.92312 0 23496000 12543000 10954000 31331 740 11905 12229 48846 48846 SIDISATIPK 10 1 0 Unmodified _SIDISATIPK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.8004 2 522.800414 1043.58628 82757.99 0.31175 0.00016298 0.1589 8.3074E-05 0.47065 0.00024606 522.800418083131 526.80750672958 92.888 1.392 92.888 92.352 93.744 0 421 83 8 0 0 0 0.010458 2 51704 53.327 29.172 1 1.7242 1.4194 0 40091000 14338000 25753000 31332 740 11905 12229 48847;48848 48848 SIDISATIPK 10 1 0 Unmodified _SIDISATIPK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 526.8073 2 522.800414 1043.58628 83797.45 0.10564 5.5228E-05 0.2954 0.00015444 0.40104 0.00020966 522.800518263825 526.807580125455 92.762 1.3463 92.762 92.256 93.603 0 411 79 8 0 0 0 0.0088235 3 50810 55.549 21.753 1 1.6742 1.3849 0 32856000 12313000 20543000 31333 740 11905 12229 48849;48850;48851 48850 SIDPALSMLIK 11 1 0 Oxidation (M) _SIDPALSM(ox)LIK_ SIDPALSM(1)LIK SIDPALSM(51.27)LIK 0 1 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.3363 2 602.336307 1202.65806 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.48 1 100.48 99.982 100.98 -7.6294E-06 0 0 0 0.011454 1 63124 51.268 33.882 1 31334 2033 11906 12230 48852 48852 1870 SIDPGLKEDTLEFLIK 16 2 0 Unmodified _SIDPGLKEDTLEFLIK_ 0 0 1 B3KMS0;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.3455 3 606.66802 1816.98223 76279.77 0.69987 0.00042459 -0.21176 -0.00012847 0.4881 0.00029612 607.002176756909 612.010849267694 123.72 0.53482 123.72 123.51 124.04 7.6294E-06 85 22 5 0 0 0 0.027949 1 73980 17.078 17.078 1 1.7611 1.5192 0 5261600 2065300 3196300 31335 908 11907 12231 48853 48853 SIDSFGQVSHPK 12 1 0 Unmodified _SIDSFGQVSHPK_ 0 0 0 A0A024R101;Q86XZ4 A0A024R101 A0A024R101 SPATS2 Spermatogenesis-associated serine-rich protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.336 2 651.327859 1300.64116 NaN NaN NaN -0.035382 -2.3046E-05 NaN NaN NaN NaN 37.457 0.29705 37.457 37.315 37.612 0 0 0 0 0.026076 1 19128 48.998 17.238 1 NaN NaN 0 4270500 0 4270500 31336 64 11908 12232 48854 48854 SIDSFGQVSHPK 12 1 0 Unmodified _SIDSFGQVSHPK_ 0 0 0 A0A024R101;Q86XZ4 A0A024R101 A0A024R101 SPATS2 Spermatogenesis-associated serine-rich protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3277 2 651.327859 1300.64116 75544.77 0.90767 0.00059119 0.6841 0.00044558 1.5918 0.0010368 651.327873516658 655.334893341242 36.245 0.2309 36.245 36.131 36.362 0 75 18 6 0 0 0 0.00022516 1 18597 83.862 66.836 1 0.86167 0.88232 0 11861000 5665500 6195800 31337 64 11908 12232 48855 48855 SIDSFGQVSHPK 12 1 0 Unmodified _SIDSFGQVSHPK_ 0 0 0 A0A024R101;Q86XZ4 A0A024R101 A0A024R101 SPATS2 Spermatogenesis-associated serine-rich protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3287 2 651.327859 1300.64116 75602.91 0.66573 0.00043361 -0.092536 -6.0271E-05 0.57319 0.00037334 651.327738549973 655.334814258836 42.712 0.3693 42.712 42.526 42.896 0 80 23 4 0 0 0 0.0022514 1 20007 59.067 51.939 1 1.0358 0.86875 0 2182500 962640 1219800 31338 64 11908 12232 48856 48856 SIDSNPYDTDK 11 1 0 Unmodified _SIDSNPYDTDK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3;I3L0L3 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.7778 2 627.777864 1253.54118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.665 1 28.665 28.165 29.165 0 0 0 0 0.00084361 1 13731 70.1 49.771 1 31339 1096 11909 12233 48857 48857 SIEALLEAGQAR 12 0 1 Unmodified _SIEALLEAGQAR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.2942 2 629.343509 1256.67246 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.015 1 91.015 90.515 91.515 7.6294E-06 0 0 0 0.0027351 1 55050 67.726 44.406 1 31340 471 11910 12234 48858 48858 SIEALLEAGQAR 12 0 1 Unmodified _SIEALLEAGQAR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3488 2 629.343509 1256.67246 80599.84 0.81552 0.00051324 -1.2126 -0.00076314 -0.39708 -0.0002499 629.844030215491 634.347056203653 89.971 0.50059 89.971 89.777 90.277 -7.6294E-06 79 44 4 0 0 0 0.00020601 1 55520 79.974 54.035 1 0.90821 0.90246 0 7429200 4180700 3248500 31341 471 11910 12234 48859 48859 SIEAVHEDIR 10 0 1 Unmodified _SIEAVHEDIR_ 0 0 0 H7BZ20;Q6FGU2;Q53F55;P23919;H7C312 H7BZ20 H7BZ20 DTYMK Thymidylate kinase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.8057 2 584.801477 1167.5884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.818 1 32.818 32.318 33.318 0 0 0 0 0.01038 1 16326 57.267 33.839 1 31342 1313 11911 12235 48860 48860 SIEAVHEDIR 10 0 1 Unmodified _SIEAVHEDIR_ 0 0 0 H7BZ20;Q6FGU2;Q53F55;P23919;H7C312 H7BZ20 H7BZ20 DTYMK Thymidylate kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.8047 2 584.801477 1167.5884 NaN NaN NaN -0.31174 -0.0001823 NaN NaN NaN NaN 32.105 0.3718 32.105 31.863 32.235 0 0 0 0 8.46E-05 1 15911 98.033 54.787 1 NaN NaN 0 6834900 0 6834900 31343 1313 11911 12235 48861 48861 SIEAVHEDIR 10 0 1 Unmodified _SIEAVHEDIR_ 0 0 0 H7BZ20;Q6FGU2;Q53F55;P23919;H7C312 H7BZ20 H7BZ20 DTYMK Thymidylate kinase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8019 2 584.801477 1167.5884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.131 1 32.131 31.631 32.631 0 0 0 0 5.6389E-05 1 15972 85.731 52.89 1 31344 1313 11911 12235 48862 48862 SIEEQLGTEIKPIPSNIDK 19 2 0 Unmodified _SIEEQLGTEIKPIPSNIDK_ 0 0 1 B2R858;P26196 B2R858 B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.7214 3 704.379198 2110.11576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.449 1 90.449 89.949 90.949 0 0 0 0 0.0035469 1 54659 45.094 29.458 1 31345 860 11912 12236 48863 48863 SIEGPPNLGINLPLSIK 17 1 0 Unmodified _SIEGPPNLGINLPLSIK_ 0 0 0 B4DQV3;B3KXW2;A0A024R283;Q9HCE3;K7EQN0 B4DQV3 B4DQV3 ZNF532 Zinc finger protein 532 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 881.5087 2 881.509094 1761.00364 66495.85 0.724 0.00063821 0.5404 0.00047636 1.2644 0.0011146 882.011195174388 886.018047160196 124.84 0.37944 124.84 124.67 125.05 0 101 26 6 0 0 0 7.8497E-05 2 81114 62.891 62.891 1 0.48357 0.49046 0 6597700 3811900 2785800 31346 108 11913 12237 48864;48865 48864 SIEGPPNLGINLPLSIK 17 1 0 Unmodified _SIEGPPNLGINLPLSIK_ 0 0 0 B4DQV3;B3KXW2;A0A024R283;Q9HCE3;K7EQN0 B4DQV3 B4DQV3 ZNF532 Zinc finger protein 532 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.0181 2 881.509094 1761.00364 66170.23 0.99952 0.00088108 0.33197 0.00029263 1.3315 0.0011737 882.011157972613 886.017633183807 124.5 0.36261 124.5 124.3 124.67 7.6294E-06 64 22 5 0 0 0 0.0021036 3 82818 36.847 36.847 1 0.3578 0.3562 0 5734700 4042900 1691800 31347 108 11913 12237 48866;48867;48868 48867 SIEGTADDEEEGVSPDTAIR 20 0 1 Unmodified _SIEGTADDEEEGVSPDTAIR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1046.4733 2 1045.97165 2089.92875 60349.8 0.51629 0.00054002 -0.030962 -3.2385E-05 0.48533 0.00050764 1045.97124601947 1050.97597781153 68.047 0.57301 68.047 67.759 68.332 7.6294E-06 190 48 6 0 0 0 0.0026497 3 39270 49.298 47.159 1 0.75206 0.78011 0 13665000 6819100 6846100 31348 1270 11914 12238 48869;48870;48871 48871 SIEGTADDEEEGVSPDTAIR 20 0 1 Unmodified _SIEGTADDEEEGVSPDTAIR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1051.4786 2 1045.97165 2089.92875 60318.61 0.44958 0.00047025 -0.21183 -0.00022157 0.23774 0.00024867 1045.97170133123 1050.97537686664 67.106 0.44416 67.106 66.903 67.347 0 160 37 6 0 0 0 5.395E-07 2 39644 88.282 83.299 1 0.72206 0.74171 0 21183000 14933000 6250200 31349 1270 11914 12238 48872;48873 48873 SIEGTADDEEEGVSPDTAIR 20 0 1 Unmodified _SIEGTADDEEEGVSPDTAIR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1051.4802 2 1045.97165 2089.92875 59921.67 0.20802 0.00021758 0.30945 0.00032367 0.51747 0.00054126 1046.47341622387 1050.97565985854 78.294 0.49098 78.294 78.034 78.525 0 167 32 7 0 0 0 0.016942 1 41945 23.481 23.481 1 0.64792 0.5496 0 5120100 3173300 1946800 31350 1270 11914 12238 48874 48874 SIEGTADDEEEGVSPDTAIR 20 0 1 Unmodified _SIEGTADDEEEGVSPDTAIR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1050.9761 2 1045.97165 2089.92875 59798.43 0.2625 0.00027457 0.14778 0.00015458 0.41029 0.00042915 1046.47324857871 1050.97583383079 78.63 0.50019 78.63 78.413 78.913 0 185 34 7 0 0 0 0.00015459 2 41405 42.568 42.568 1 0.63838 0.53655 0 4825100 2906000 1919200 31351 1270 11914 12238 48875;48876 48876 SIEIPRPVDGVEVPGCGK 18 1 1 Unmodified _SIEIPRPVDGVEVPGCGK_ 0 0 1 K7ENG2;B5BU25;P26368 K7ENG2 K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.9988 3 636.999775 1907.9775 NaN NaN NaN -0.62922 -0.00040082 NaN NaN NaN NaN 88.138 0.25775 88.138 88.11 88.368 0 0 0 0 0.0057223 1 53226 30.489 6.2021 1 NaN NaN 0 7637000 7637000 0 31352 1074 11915 12239 48877 48877 SIELFYK 7 1 0 Unmodified _SIELFYK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 450.2473 2 450.247286 898.48002 91528.4 0.020365 9.1692E-06 0.29322 0.00013202 0.31359 0.00014119 450.247272799595 454.254375506604 91.378 0.90913 91.378 91.103 92.012 0 240 61 6 0 0 0 0.057145 1 49919 55.441 24.138 1 0.32856 0.26805 0 6070200 4634500 1435700 31353 1665 11916 12240 48878 48878 SIEVYSAYNNVK 12 1 0 Unmodified _SIEVYSAYNNVK_ 0 0 0 Q96S55 Q96S55 Q96S55 WRNIP1 ATPase WRNIP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8564 2 693.848624 1385.6827 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.724 1 63.724 63.224 64.224 -3.8147E-06 0 0 0 1.1352E-06 1 37481 99.653 72.538 1 31354 1987 11917 12241 48879 48879 SIEVYSAYNNVK 12 1 0 Unmodified _SIEVYSAYNNVK_ 0 0 0 Q96S55 Q96S55 Q96S55 WRNIP1 ATPase WRNIP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8552 2 693.848624 1385.6827 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.756 1 63.756 63.256 64.256 3.8147E-06 0 0 0 0.00092877 1 37500 74.162 47.648 1 31355 1987 11917 12241 48880 48880 SIFGEDALANVSIEK 15 1 0 Unmodified _SIFGEDALANVSIEK_ 0 0 0 P53618 P53618 P53618 COPB1 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.9136 2 796.911953 1591.80935 69134.63 1.2842 0.0010234 0.37934 0.0003023 1.6635 0.0013257 796.913166814277 800.918899088948 108.55 0.4113 108.55 108.33 108.74 7.6294E-06 112 30 5 0 0 0 1.0093E-05 1 67750 92.925 76.293 1 1.4768 1.4581 0 25272000 10906000 14366000 31356 1606 11918 12242 48881 48881 SIFLFLDR 8 0 1 Unmodified _SIFLFLDR_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.7874 2 505.78711 1009.55967 87483.25 0.9873 0.00049937 -0.62705 -0.00031716 0.36025 0.00018221 505.786800200593 510.790952115711 118.51 0.76712 118.51 118.18 118.95 0 150 44 5 0 0 0 0.0092293 3 75953 75.213 55.576 1 0.73198 0.7328 0 8989100 4989800 3999300 31357 1718 11919 12243 48882;48883;48884 48883 SIFLFLDR 8 0 1 Unmodified _SIFLFLDR_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.791 2 505.78711 1009.55967 87474.47 0.62141 0.0003143 -0.31152 -0.00015756 0.30988 0.00015674 505.78700064102 510.79105305323 117.9 0.73476 117.9 117.6 118.33 7.6294E-06 193 48 6 0 0 0 0.030566 2 77275 51.854 28.326 1 0.79626 0.78587 0 12843000 7041000 5801800 31358 1718 11919 12243 48885;48886 48885 SIFLFLDR 8 0 1 Unmodified _SIFLFLDR_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.7874 2 505.78711 1009.55967 85866.36 0.77615 0.00039257 0.077081 3.8987E-05 0.85323 0.00043155 505.787098948392 510.791081815098 129.84 0.825 129.84 129.57 130.4 0 111 31 6 0 0 0 0.045643 2 77679 45.335 30.553 1 0.79906 0.68264 0 3246400 1823100 1423300 31359 1718 11919 12243 48887;48888 48887 SIFQHIQSAQSQR 13 0 1 Unmodified _SIFQHIQSAQSQR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.3948 2 765.394596 1528.77464 69128.88 1.0583 0.00081005 0.15891 0.00012163 1.2173 0.00093168 765.394792179555 770.39864794483 44.392 0.52656 44.392 44.165 44.691 0 214 45 8 0 0 0 0.00013896 2 23831 73.466 56.835 1 1.039 1.1199 0 47955000 23082000 24873000 31360 2128 11920 12244 48889;48890 48890 SIFQHIQSAQSQR 13 0 1 Unmodified _SIFQHIQSAQSQR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.5989 3 510.598823 1528.77464 84072.44 0.8161 0.0004167 -0.16564 -8.4575E-05 0.65046 0.00033212 510.598730882931 513.934808023085 44.394 0.89742 44.394 44.028 44.926 0 405 80 8 0 0 0 3.1458E-09 1 23914 95.264 82.146 1 0.99299 1.1039 0 74387000 35689000 38698000 31361 2128 11920 12244 48891 48891 SIFQHIQSAQSQR 13 0 1 Unmodified _SIFQHIQSAQSQR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.3998 2 765.394596 1528.77464 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.17 1 44.17 43.67 44.67 3.8147E-06 0 0 0 0.0050947 1 23692 58.132 34.043 1 31362 2128 11920 12244 48892 48892 SIFQHIQSAQSQR 13 0 1 Unmodified _SIFQHIQSAQSQR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.4 2 765.394596 1528.77464 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.223 1 44.223 43.723 44.723 0 0 0 0 0.0009328 1 23728 78.884 56.891 1 31363 2128 11920 12244 48893 48893 SIFQHIQSAQSQR 13 0 1 Unmodified _SIFQHIQSAQSQR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.3946 2 765.394596 1528.77464 68412.86 0.85446 0.000654 -1.3303 -0.0010182 -0.47587 -0.00036423 765.391760302636 770.900081282886 42.447 0.58266 42.447 42.184 42.767 0 150 48 5 0 0 0 0.00011751 1 22967 91.123 72.378 1 0.84358 0.97516 0 56277000 29540000 26737000 31364 2128 11920 12244 48894 48894 SIFQHIQSAQSQR 13 0 1 Unmodified _SIFQHIQSAQSQR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.9348 3 510.598823 1528.77464 NaN NaN NaN -0.29774 -0.00015202 NaN NaN NaN NaN 42.44 0.83455 42.44 42.147 42.981 0 0 0 0 0.0013573 1 22775 61.167 49.375 1 NaN NaN 0 44651000 0 44651000 31365 2128 11920 12244 48895 48895 SIFQHIQSAQSQR 13 0 1 Unmodified _SIFQHIQSAQSQR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.5989 3 510.598823 1528.77464 81868.7 0.3197 0.00016324 -0.25231 -0.00012883 0.067385 3.4407E-05 510.598589358423 513.934762494724 50.527 0.79747 50.527 50.2 50.998 0 299 57 8 0 0 0 0.0039027 2 24705 30.483 18.318 1 1.1198 0.93199 0 10746000 5128800 5616900 31366 2128 11920 12244 48896;48897 48897 SIFQHIQSAQSQR 13 0 1 Unmodified _SIFQHIQSAQSQR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.3984 2 765.394596 1528.77464 68969.42 0.48241 0.00036924 -0.34682 -0.00026546 0.13559 0.00010378 765.394160574649 770.398720418085 50.507 0.7803 50.507 50.056 50.836 0 205 63 7 0 0 0 0.0020685 2 24718 55.261 55.261 1 1.0835 0.91069 0 4374200 2123300 2250900 31367 2128 11920 12244 48898;48899 48898 SIFQHIQSAQSQR 13 0 1 Unmodified _SIFQHIQSAQSQR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.9351 3 510.598823 1528.77464 82997.13 0.1209 6.173E-05 -0.38002 -0.00019404 -0.25912 -0.00013231 510.598195461691 513.934878251009 50.596 0.79699 50.596 50.242 51.039 3.8147E-06 355 58 8 0 0 0 0.0018424 2 24164 37.013 25.907 1 1.2249 1.0201 0 6273300 3013300 3260000 31368 2128 11920 12244 48900;48901 48900 SIFQHIQSAQSQR 13 0 1 Unmodified _SIFQHIQSAQSQR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.394 2 765.394596 1528.77464 68849.42 0.44022 0.00033694 -0.61244 -0.00046876 -0.17222 -0.00013182 765.393599986356 770.398532065149 50.579 0.66097 50.579 50.282 50.943 0 226 49 6 0 0 0 0.013678 1 24240 38.021 38.021 1 1.0227 0.88702 0 2667400 1495300 1172100 31369 2128 11920 12244 48902 48902 SIFSAVLDELK 11 1 0 Unmodified _SIFSAVLDELK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.3477 2 611.339904 1220.66525 NaN NaN NaN -0.030374 -1.8569E-05 NaN NaN NaN NaN 128.68 0.35547 128.68 128.44 128.79 0 0 0 0 0.0088996 1 83828 60.518 32.776 1 NaN NaN 0 4429300 0 4429300 31370 148 11921 12245 48903 48903 SIFSAVLDELK 11 1 0 Unmodified _SIFSAVLDELK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.3475 2 611.339904 1220.66525 77520.95 0.7099 0.00043399 -0.36501 -0.00022314 0.34489 0.00021084 611.338714438812 615.347072310206 128.19 0.48994 128.19 127.91 128.4 0 105 29 6 0 0 0 0.0012874 1 85580 68.657 36.337 1 1.8127 1.8322 0 8650000 3195400 5454600 31371 148 11921 12245 48904 48904 SIFSLDTPEQYQEAFQK 17 1 0 Unmodified _SIFSLDTPEQYQEAFQK_ 0 0 0 B7ZLC9;Q8TEQ6 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1020.5026 2 1015.98892 2029.96329 59982.8 0.64787 0.00065823 0.30958 0.00031453 0.95745 0.00097275 1016.4898023851 1019.99648136391 111.91 0.35691 111.91 111.69 112.04 0 99 25 6 0 0 0 0.0033755 2 72381 52.247 46.968 1 0.99232 1.023 0 9624400 5070500 4553900 31372 1114 11922 12246 48905;48906 48906 SIFTGLMIDPR 11 0 1 Oxidation (M) _SIFTGLM(ox)IDPR_ SIFTGLM(1)IDPR SIFTGLM(75.51)IDPR 0 1 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.3361 2 633.331556 1264.64856 75763.52 0.62848 0.00039803 0.1278 8.0942E-05 0.75628 0.00047898 633.33157004803 638.335757002422 105.67 0.9181 105.67 105.21 106.13 0 291 69 6 0 0 0 0.00023064 1 65589 75.509 56.238 1 1.3507 1.3715 0 29098000 12357000 16742000 31373 716 11923 12247 48907 48907 552 SIFTGLMIDPR 11 0 1 Oxidation (M) _SIFTGLM(ox)IDPR_ SIFTGLM(1)IDPR SIFTGLM(76.14)IDPR 0 1 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3357 2 633.331556 1264.64856 75238.19 0.73508 0.00046555 0.13512 8.5579E-05 0.87021 0.00055113 633.331731874507 638.335736234489 105.02 0.7663 105.02 104.58 105.35 0 306 60 6 0 0 0 0.00022672 1 66509 76.143 53.403 1 1.2991 1.4453 0 43454000 18709000 24745000 31374 716 11923 12247 48908 48908 552 SIFTGLMIDPR 11 0 1 Oxidation (M) _SIFTGLM(ox)IDPR_ SIFTGLM(1)IDPR SIFTGLM(50.28)IDPR 0 1 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.3312 2 633.331556 1264.64856 75886.73 0.4482 0.00028386 0.31735 0.00020099 0.76555 0.00048485 633.331779453322 638.336136315629 117.24 0.65741 117.24 116.9 117.55 0 114 29 5 0 0 0 0.0042269 1 69004 50.284 31.013 1 0.84667 0.72887 0 7323800 3281500 4042300 31375 716 11923 12247 48909 48909 552 SIFTGLMIDPR 11 0 1 Unmodified _SIFTGLMIDPR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.334 2 625.334098 1248.65364 78313.69 0.93634 0.00058552 -0.45484 -0.00028443 0.48149 0.00030109 625.333905257662 630.338086996498 126.03 0.64908 126.03 125.78 126.42 7.6294E-06 103 26 6 0 0 0 0.021359 2 75727 43.308 31.261 1 1.3511 1.1716 0 2478000 1061600 1416400 31376 716 11923 12248 48910;48911 48911 SIFTGLMIDPR 11 0 1 Unmodified _SIFTGLMIDPR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.3348 2 625.334098 1248.65364 77006.5 0.70473 0.00044069 -0.20478 -0.00012805 0.49995 0.00031264 625.334198229856 630.338019995253 125.82 0.5826 125.82 125.56 126.14 0 102 27 6 0 0 0 0.017726 2 74785 45.161 30.01 1 1.2042 1.044 0 2673500 1171800 1501700 31377 716 11923 12248 48912;48913 48913 SIFVLPNDDLK 11 1 0 Unmodified _SIFVLPNDDLK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.8534 2 630.845353 1259.67615 80480.51 0.64161 0.00040476 0.4229 0.00026679 1.0645 0.00067155 630.844852489103 634.853298667869 105.04 0.69869 105.04 104.75 105.45 0 157 55 4 0 0 0 0.001099 1 64968 70.1 55.893 1 0.74964 0.78153 0 11707000 5347000 6359700 31378 1224 11924 12249 48914 48914 SIFVLPNDDLK 11 1 0 Unmodified _SIFVLPNDDLK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.8534 2 630.845353 1259.67615 NaN NaN NaN 0.38058 0.00024008 NaN NaN NaN NaN 104.38 0.52049 104.38 104.09 104.61 0 0 0 0 0.0059116 1 66051 64.297 43.968 1 NaN NaN 0 4399200 0 4399200 31379 1224 11924 12249 48915 48915 SIFVLPNDDLK 11 1 0 Unmodified _SIFVLPNDDLK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.8513 2 630.845353 1259.67615 77927.48 0.35341 0.00022295 0.45086 0.00028442 0.80427 0.00050737 630.845523975587 634.852860616237 116.65 0.46904 116.65 116.43 116.9 0 64 17 5 0 0 0 0.015176 1 68513 46.462 31.311 1 1.5145 1.2438 0 2410500 1144600 1265900 31380 1224 11924 12249 48916 48916 SIFVLPNDDLK 11 1 0 Unmodified _SIFVLPNDDLK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.845 2 630.845353 1259.67615 78066.37 0.83618 0.0005275 -0.4156 -0.00026218 0.42058 0.00026532 630.844925680956 634.852460138466 116.47 0.52985 116.47 116.17 116.7 0 76 23 5 0 0 0 0.033049 2 67528 37.344 22.193 1 1.5898 1.2737 0 2448300 894030 1554200 31381 1224 11924 12249 48917;48918 48918 SIGEYDVLR 9 0 1 Unmodified _SIGEYDVLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.2783 2 526.274564 1050.53457 82153.78 0.39707 0.00020897 0.38033 0.00020016 0.7774 0.00040912 526.27473511422 531.278858996907 70.999 0.99425 70.999 70.637 71.632 0 351 81 8 0 0 0 0.0018938 2 41312 79.474 40.682 1 0.67285 0.74595 0 65905000 39803000 26101000 31382 1665 11925 12250 48919;48920 48920 SIGEYDVLR 9 0 1 Unmodified _SIGEYDVLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.275 2 526.274564 1050.53457 82043.91 0.35367 0.00018612 0.082706 4.3526E-05 0.43637 0.00022965 526.274600587204 531.278864565707 69.674 1.3255 69.674 69.228 70.553 0 372 110 8 0 0 0 0.020683 1 41449 50.04 33.264 1 0.63632 0.73668 0 67394000 40442000 26952000 31383 1665 11925 12250 48921 48921 SIGEYDVLR 9 0 1 Unmodified _SIGEYDVLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.2745 2 526.274564 1050.53457 82017.83 0.27929 0.00014699 0.21963 0.00011559 0.49892 0.00026257 526.274708763334 531.278559397364 81.254 0.96111 81.254 80.972 81.933 -7.6294E-06 264 58 8 0 0 0 0.037381 2 43941 43.083 21.783 1 0.54122 0.44239 0 15968000 11818000 4149600 31384 1665 11925 12250 48922;48923 48923 SIGEYDVLR 9 0 1 Unmodified _SIGEYDVLR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 526.275 2 526.274564 1050.53457 81816.38 0.43557 0.00022923 -0.26378 -0.00013882 0.17179 9.0411E-05 526.27458294416 531.780035537003 81.426 0.87726 81.426 81.122 82 0 253 47 10 0 0 0 0.063863 1 43204 35.445 23.676 1 0.60597 0.50731 0 16518000 10705000 5813600 31385 1665 11925 12250 48924 48924 SIGSAVDQGNESIVAK 16 1 0 Unmodified _SIGSAVDQGNESIVAK_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8W1E5 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.9133 2 787.904659 1573.79476 70122.6 0.60356 0.00047555 0.11533 9.0873E-05 0.7189 0.00056642 787.904750152313 791.911968962821 56.536 0.523 56.536 56.235 56.758 0 193 46 6 0 0 0 2.1909E-08 2 31841 118.87 112.76 1 0.72375 0.74498 0 17413000 10271000 7141900 31386 68 11926 12251 48925;48926 48926 SIGSAVDQGNESIVAK 16 1 0 Unmodified _SIGSAVDQGNESIVAK_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8W1E5 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.905 2 787.904659 1573.79476 NaN NaN NaN 0.32886 0.00025911 NaN NaN NaN NaN 55.666 0.59116 55.666 55.376 55.967 0 0 0 0 1.1034E-46 1 31863 158.25 124.53 1 NaN NaN 0 13807000 13807000 0 31387 68 11926 12251 48927 48927 SIGSAVDQGNESIVAK 16 1 0 Unmodified _SIGSAVDQGNESIVAK_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8W1E5 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 787.9053 2 787.904659 1573.79476 69294.74 0.75222 0.00059268 -0.030658 -2.4155E-05 0.72157 0.00056852 787.904591930945 791.911701326949 65.975 0.54759 65.975 65.711 66.258 0 187 38 6 0 0 0 0.00038014 2 34159 73.273 73.273 1 1.9627 1.5652 0 9536600 3378900 6157700 31388 68 11926 12251 48928;48929 48929 SIGSAVDQGNESIVAK 16 1 0 Unmodified _SIGSAVDQGNESIVAK_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8W1E5 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.9054 2 787.904659 1573.79476 68459.63 0.5756 0.00045352 0.16075 0.00012665 0.73635 0.00058017 787.904837728615 791.911865478578 66.568 0.57541 66.568 66.286 66.861 0 192 38 6 0 0 0 0.00015465 2 33768 86.288 76.6 1 2.0933 1.7102 0 8144000 2411800 5732300 31389 68 11926 12251 48930;48931 48931 SIHFSSPVFTSR 12 0 1 Acetyl (Protein N-term) _(ac)SIHFSSPVFTSR_ 1 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.3628 2 703.856783 1405.69901 71832.95 0.59677 0.00042004 0.077474 5.4531E-05 0.67424 0.00047457 703.856712878452 708.861032823668 99.113 1.0248 99.113 98.708 99.733 -7.6294E-06 481 82 8 0 0 0 0.0003449 3 60456 79.974 69.45 1 1.1889 1.3471 0 106410000 50248000 56161000 + 31390 1171;1158 11927 12252 48932;48933;48934 48933 SIHFSSPVFTSR 12 0 1 Acetyl (Protein N-term) _(ac)SIHFSSPVFTSR_ 1 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.8617 2 703.856783 1405.69901 71914.04 0.79338 0.00055843 0.033832 2.3813E-05 0.82721 0.00058224 703.856625621476 708.860995272975 98.396 0.95152 98.396 98.004 98.955 7.6294E-06 476 81 8 0 0 0 0.00096987 2 61355 68.893 54.754 1 1.2054 1.3918 0 247020000 114100000 132920000 + 31391 1171;1158 11927 12252 48935;48936 48935 SIHFSSPVFTSR 12 0 1 Acetyl (Protein N-term) _(ac)SIHFSSPVFTSR_ 1 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.8613 2 703.856783 1405.69901 72691.72 0.94272 0.00066354 0.034635 2.4378E-05 0.97735 0.00068792 703.856604047479 708.861006587672 111.73 0.57935 111.73 111.41 111.99 0 194 33 8 0 0 0 0.0084604 2 64643 51.927 46.146 1 1.0682 0.90307 0 30336000 16307000 14029000 + 31392 1171;1158 11927 12252 48937;48938 48937 SIHFSSPVFTSR 12 0 1 Acetyl (Protein N-term) _(ac)SIHFSSPVFTSR_ 1 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.8557 2 703.856783 1405.69901 72688.36 0.60072 0.00042282 0.15606 0.00010985 0.75679 0.00053267 703.856706624718 708.861002543844 111.54 0.6306 111.54 111.26 111.89 -7.6294E-06 182 29 8 0 0 0 0.0022675 2 63629 61.353 55.572 1 1.0858 0.92959 0 20745000 9180900 11564000 + 31393 1171;1158 11927 12252 48939;48940 48940 SIIDGYITPMDFIWLK 16 1 0 Oxidation (M) _SIIDGYITPM(ox)DFIWLK_ SIIDGYITPM(1)DFIWLK SIIDGYITPM(48)DFIWLK 0 1 0 Q86YR7 Q86YR7 Q86YR7 MCF2L2 Probable guanine nucleotide exchange factor MCF2L2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 964.4977 2 964.497338 1926.98012 NaN NaN NaN -1.3255 -0.0012785 NaN NaN NaN NaN 130.19 0.88791 130.19 129.77 130.66 0 0 0 0 0.0031554 1 78909 48.004 32.464 1 NaN NaN 0 107970000 107970000 0 31394 1889 11928 12253 48941 48941 1737 SIIDGYITPMDFIWLK 16 1 0 Oxidation (M) _SIIDGYITPM(ox)DFIWLK_ SIIDGYITPM(1)DFIWLK SIIDGYITPM(49.3)DFIWLK 0 1 0 Q86YR7 Q86YR7 Q86YR7 MCF2L2 Probable guanine nucleotide exchange factor MCF2L2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 968.5032 2 964.497338 1926.98012 55998.43 0.48707 0.00046978 -1.5184 -0.0014645 -1.0313 -0.00099473 964.995758753507 968.502456943129 130.05 0.88049 130.05 129.7 130.58 0 240 32 10 0 0 0 0.00023201 1 77882 49.3 30.169 1 1.7098 1.4862 0 319870000 73833000 246030000 31395 1889 11928 12253 48942 48942 1737 SIILEGFK 8 1 0 Unmodified _SIILEGFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.7747 2 453.768386 905.522219 89322.45 0.38797 0.00017605 0.29973 0.00013601 0.6877 0.00031206 453.768450588687 457.775524935699 85.461 1.0519 85.461 85.146 86.198 0 482 87 8 0 0 0 0.027047 2 51204 54.157 25.939 1 0.88473 1.0456 0 392550000 194090000 198460000 31396 69 11929 12254 48943;48944 48943 SIILEGFK 8 1 0 Unmodified _SIILEGFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.7684 2 453.768386 905.522219 88526.05 0.15304 6.9446E-05 0.064009 2.9045E-05 0.21705 9.8491E-05 453.768371224733 457.775398906757 84.485 1.1688 84.485 84.059 85.228 0 464 96 8 0 0 0 0.032325 1 51684 50.703 22.485 1 0.85025 0.99891 0 354400000 190160000 164250000 31397 69 11929 12254 48945 48945 SIILEGFK 8 1 0 Unmodified _SIILEGFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 457.776 2 453.768386 905.522219 90535.66 0.31178 0.00014147 -0.21165 -9.6039E-05 0.10013 4.5435E-05 453.768288142768 457.775265128943 97.651 1.7681 97.651 97.203 98.971 0 413 109 7 0 0 0 0.026353 2 54869 54.611 25.983 1 1.7482 1.4482 0 44639000 15947000 28692000 31398 69 11929 12254 48946;48947 48946 SIILEGFK 8 1 0 Unmodified _SIILEGFK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 453.7682 2 453.768386 905.522219 89998.3 -0.094413 -4.2842E-05 0.18582 8.4318E-05 0.091403 4.1476E-05 453.768408752055 457.775454788918 97.436 1.7375 97.436 97.02 98.757 0 374 100 8 0 0 0 0.032325 2 53952 50.703 23.553 1 1.7306 1.4476 0 44678000 16126000 28553000 31399 69 11929 12254 48948;48949 48949 SIIQSAQQDSIK 12 1 0 Unmodified _SIIQSAQQDSIK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.3616 2 659.354074 1316.69359 NaN NaN NaN 0.8289 0.00054654 NaN NaN NaN NaN 48.824 0.67698 48.824 48.326 49.003 0 0 0 0 0.0010603 1 27320 82.261 61.931 1 NaN NaN 0 6106100 0 6106100 31400 1205 11930 12255 48950 48950 SIITYVSSLYDAMPR 15 0 1 Oxidation (M) _SIITYVSSLYDAM(ox)PR_ SIITYVSSLYDAM(1)PR SIITYVSSLYDAM(44.85)PR 0 1 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.4395 2 866.434738 1730.85492 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.05 1 117.05 116.55 117.55 0 0 0 0 0.0059085 1 76696 44.847 29.581 1 31401 1754 11931 12256 48951 48951 1617 SILDQLDWIVNK 12 1 0 Unmodified _SILDQLDWIVNK_ 0 0 0 B4DYU9;A0A024R411;Q13416 B4DYU9 B4DYU9 ORC2L;ORC2 Origin recognition complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.4036 2 722.395741 1442.77693 73693.43 0.86361 0.00062387 -0.10321 -7.456E-05 0.7604 0.00054931 722.395546821696 726.402846792337 130.46 0.50763 130.46 130.26 130.77 0 115 33 6 0 0 0 8.1241E-05 2 85115 96.89 91.584 1 1.4305 1.4385 0 5247800 2349700 2898000 31402 146 11932 12257 48952;48953 48953 SILDQLDWIVNK 12 1 0 Unmodified _SILDQLDWIVNK_ 0 0 0 B4DYU9;A0A024R411;Q13416 B4DYU9 B4DYU9 ORC2L;ORC2 Origin recognition complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.4037 2 722.395741 1442.77693 72953.35 0.76906 0.00055556 0.097767 7.0627E-05 0.86683 0.00062619 722.395554547134 726.402998176266 130.07 0.43399 130.07 129.9 130.34 0 121 30 5 0 0 0 2.5204E-08 2 86935 119.68 102.45 1 1.2897 1.2853 0 6397400 3026800 3370600 31403 146 11932 12257 48954;48955 48955 SILEEDEEDEEPPR 14 0 1 Unmodified _SILEEDEEDEEPPR_ 0 0 0 J3KNX4;D6W5Y8;A0A0D9SGJ8;Q2TAK8 J3KNX4 J3KNX4 MUM1 PWWP domain-containing protein MUM1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.372 2 843.870679 1685.7268 NaN NaN NaN -0.82113 -0.00069293 NaN NaN NaN NaN 57.041 0.11139 57.041 57.009 57.12 3.8147E-06 0 0 0 0.0033694 1 32978 62.408 56.562 1 NaN NaN 0 1647900 1647900 0 31404 529 11933 12258 48956 48956 SILEQLAEK 9 1 0 Unmodified _SILEQLAEK_ 0 0 0 Q53SY7;F8VPD4;P27708;H7C3Z5 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7996 2 515.792589 1029.57063 86588.46 0.16454 8.4869E-05 -0.39358 -0.000203 -0.22904 -0.00011814 515.792722704717 519.799708576951 78.198 0.31043 78.198 77.991 78.301 0 78 25 4 0 0 0 0.028949 2 47313 46.457 14.395 1 0.81389 0.82213 0 8426000 4417400 4008600 31405 1259 11934 12259 48957;48958 48957 SILGLGQARPLEFLR 15 0 2 Unmodified _SILGLGQARPLEFLR_ 0 0 1 Q4VC44;I3L188 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.0022 3 557.329785 1668.96752 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.56 1 112.56 112.06 113.06 0 0 0 0 0.026436 1 72868 39.005 21.723 1 31406 1781 11935 12260 48959 48959 SILGLGQARPLEFLR 15 0 2 Unmodified _SILGLGQARPLEFLR_ 0 0 1 Q4VC44;I3L188 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.6644 3 557.329785 1668.96752 80805.84 0.81078 0.00045187 -0.30781 -0.00017155 0.50297 0.00028032 557.329495567284 564.001755423287 123.57 0.35126 123.57 123.41 123.76 7.6294E-06 60 14 6 0 0 0 0.0020863 1 73910 39.005 39.005 1 1.3542 1.17 0 5099800 1743700 3356100 31407 1781 11935 12260 48960 48960 SILGLGQARPLEFLR 15 0 2 Unmodified _SILGLGQARPLEFLR_ 0 0 1 Q4VC44;I3L188 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.3289 3 557.329785 1668.96752 81501.73 0.82881 0.00046192 -0.24125 -0.00013445 0.58756 0.00032747 557.32928747651 564.336356598245 123.28 0.35645 123.28 123.16 123.51 0 53 15 6 0 0 0 0.010557 2 72813 30.133 30.133 1 1.1148 0.99782 0 2238100 1080000 1158100 31408 1781 11935 12260 48961;48962 48961 SILHQLTASLAVAEASLR 18 0 1 Unmodified _SILHQLTASLAVAEASLR_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.3586 3 627.35818 1879.05271 76521.38 0.8129 0.00050998 0.11245 7.0546E-05 0.92535 0.00058053 627.358400025898 630.694152048287 132.63 0.22523 132.63 132.52 132.74 0 66 13 8 0 0 0 1.9713E-05 1 86679 53.773 53.773 1 0.93972 0.93851 0 8052500 3875900 4176600 31409 646 11936 12261 48963 48963 SILLATDVASR 11 0 1 Unmodified _SILLATDVASR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.3349 2 573.32987 1144.64519 80162.72 0.38968 0.00022341 0.84359 0.00048366 1.2333 0.00070707 573.33019243884 578.334348957954 78.164 0.78537 78.164 77.878 78.663 0 329 68 7 0 0 0 1.4463E-05 2 47290 110.53 67.092 1 1.0181 1.1735 0 72652000 36681000 35972000 31410 313 11937 12262 48964;48965 48965 SILLATDVASR 11 0 1 Unmodified _SILLATDVASR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.3298 2 573.32987 1144.64519 78945.3 0.38512 0.0002208 0.34541 0.00019803 0.73053 0.00041883 573.329972225272 578.334097370094 90.139 1.0455 90.139 89.716 90.762 0 371 69 8 0 0 0 0.0015695 3 49923 77.379 38.357 1 1.2772 1.0501 0 17658000 7951700 9705900 31411 313 11937 12262 48966;48967;48968 48968 SILLATDVASR 11 0 1 Unmodified _SILLATDVASR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.3303 2 573.32987 1144.64519 78741.88 0.29025 0.00016641 0.32434 0.00018595 0.61459 0.00035236 573.329986142834 578.334048485256 90.076 1.2706 90.076 89.663 90.934 0 355 79 8 0 0 0 0.0040736 2 48916 68.893 39.42 1 1.2733 1.0546 0 14956000 7203800 7752300 31412 313 11937 12262 48969;48970 48970 SILLDMATR 9 0 1 Oxidation (M) _SILLDM(ox)ATR_ SILLDM(1)ATR SILLDM(48.79)ATR 0 1 0 Q9NSI6;Q5R2U6;H0Y463;Q5R2U9;H0Y500;Q5R2U8;H0Y5I9;Q5R2U5;H0Y4A7;Q5R2U4;H0Y4R9;Q8WWQ0 Q9NSI6;Q8WWQ0 Q8WWQ0 BRWD1;WDR9;PHIP Bromodomain and WD repeat-containing protein 1;PH-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.283 2 518.278792 1034.54303 NaN NaN NaN -0.74364 -0.00038541 NaN NaN NaN NaN 59.45 0.49371 59.45 59.218 59.711 -3.8147E-06 0 0 0 0.013865 1 33774 48.794 29.989 1 NaN NaN 0 12439000 0 12439000 31413 1942;2068 11938 12263 48971 48971 1783;1896 SILLDMATRPAGQNLQGIEDK 21 1 1 Oxidation (M) _SILLDM(ox)ATRPAGQNLQGIEDK_ SILLDM(1)ATRPAGQNLQGIEDK SILLDM(78.98)ATRPAGQNLQGIEDK 0 1 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.7313 3 762.730125 2285.16855 69228.66 0.84266 0.00064273 0.1235 9.4197E-05 0.96616 0.00073692 763.064578007942 769.071998935516 82.718 0.87919 82.718 82.326 83.206 0 381 64 8 0 0 0 4.9938E-09 4 49317 78.975 78.975 1 1.4023 1.6796 0 57327000 22828000 34499000 31414 1942 11939 12264 48972;48973;48974;48975 48973 1783 SILLDMATRPAGQNLQGIEDK 21 1 1 Oxidation (M) _SILLDM(ox)ATRPAGQNLQGIEDK_ SILLDM(1)ATRPAGQNLQGIEDK SILLDM(79.63)ATRPAGQNLQGIEDK 0 1 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.739 3 762.730125 2285.16855 69205.35 0.9032 0.0006889 -0.10211 -7.7885E-05 0.80109 0.00061101 763.064529322853 768.737526059696 81.708 0.92418 81.708 81.216 82.141 0 389 79 7 0 0 0 4.6058E-09 5 49705 79.635 79.635 1 1.5589 1.8323 0 65462000 25139000 40323000 31415 1942 11939 12264 48976;48977;48978;48979;48980 48977 1783 SILLDMATRPAGQNLQGIEDK 21 1 1 Oxidation (M) _SILLDM(ox)ATRPAGQNLQGIEDK_ SILLDM(1)ATRPAGQNLQGIEDK SILLDM(41.26)ATRPAGQNLQGIEDK 0 1 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.0727 3 762.730125 2285.16855 69420.67 0.70868 0.00054053 -0.13543 -0.00010329 0.57325 0.00043723 763.06395334442 769.071811453583 94.495 0.66002 94.495 94.23 94.89 -7.6294E-06 239 42 8 0 0 0 1.8129E-05 1 52774 41.257 37.071 1 0.91349 0.76213 0 6323300 3219400 3103900 31416 1942 11939 12264 48981 48981 1783 SILLDMATRPAGQNLQGIEDK 21 1 1 Oxidation (M) _SILLDM(ox)ATRPAGQNLQGIEDK_ SILLDM(1)ATRPAGQNLQGIEDK SILLDM(57.99)ATRPAGQNLQGIEDK 0 1 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 768.7385 3 762.730125 2285.16855 68038.05 0.84987 0.00064822 -0.39945 -0.00030468 0.45041 0.00034354 763.064143479099 769.071711819031 111.04 0.40934 111.04 110.89 111.3 7.6294E-06 84 17 7 0 0 0 1.457E-07 1 64280 57.989 49.28 1 1.7066 1.4401 0 7736400 3079000 4657500 31417 1942 11939 12264 48982 48982 1783 SILLDMATRPAGQNLQGIEDK 21 1 1 Oxidation (M) _SILLDM(ox)ATRPAGQNLQGIEDK_ SILLDM(1)ATRPAGQNLQGIEDK SILLDM(47.81)ATRPAGQNLQGIEDK 0 1 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 769.0727 3 762.730125 2285.16855 68979.83 0.83286 0.00063525 -0.21893 -0.00016698 0.61393 0.00046826 763.06432761737 769.071875974489 110.9 0.40149 110.9 110.71 111.11 0 93 20 6 0 0 0 4.0836E-06 1 63265 47.808 39.417 1 1.7892 1.5006 0 6351500 2147500 4204000 31418 1942 11939 12264 48983 48983 1783 SILLDMATRPAGQNLQGIEDK 21 1 1 Unmodified _SILLDMATRPAGQNLQGIEDK_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.7332 3 757.398487 2269.17363 68664.98 0.85095 0.00064451 0.12646 9.5779E-05 0.97741 0.00074029 757.73275035134 763.740614597483 111.05 0.68215 111.05 110.71 111.39 0 161 28 9 0 0 0 5.1883E-08 2 64297 66.644 58.356 1 2.1565 1.875 0 19030000 5758900 13271000 31419 1942 11939 12265 48984;48985 48985 SILLDMATRPAGQNLQGIEDK 21 1 1 Unmodified _SILLDMATRPAGQNLQGIEDK_ 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.7329 3 757.398487 2269.17363 68263.64 0.78751 0.00059646 0.16774 0.00012705 0.95526 0.00072351 757.732894288003 763.740556488909 110.9 0.60837 110.9 110.58 111.19 0 162 30 8 0 0 0 4.2322E-07 2 63277 54.672 39.743 1 2.4151 2.0482 0 18514000 5088000 13426000 31420 1942 11939 12265 48986;48987 48987 SILLSVPLLVVDNK 14 1 0 Unmodified _SILLSVPLLVVDNK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.968 2 755.466167 1508.91778 71197.55 0.68608 0.00051831 0.15064 0.0001138 0.83672 0.00063211 755.466047525291 759.473429823305 131.69 0.61087 131.69 131.44 132.05 0 165 39 6 0 0 0 0.00010451 1 85887 84.479 77.099 1 1.4185 1.4011 0 19375000 7906600 11469000 31421 1607 11940 12266 48988 48988 SILLSVPLLVVDNK 14 1 0 Unmodified _SILLSVPLLVVDNK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.9697 2 755.466167 1508.91778 71826.51 1.0994 0.00083056 -0.12056 -9.108E-05 0.97884 0.00073948 755.466170642961 759.473167015828 131.24 0.60913 131.24 130.99 131.6 0 218 46 7 0 0 0 7.4152E-05 4 87686 89.403 82.023 1 1.4282 1.4822 0 24712000 10500000 14211000 31422 1607 11940 12266 48989;48990;48991;48992 48991 SILSPGGSCGPIK 13 1 0 Unmodified _SILSPGGSCGPIK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;X5D7Q9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8325 2 636.834462 1271.65437 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.592 1 63.592 63.092 64.092 0 0 0 0 0.0044447 1 37391 60.434 24.49 1 31423 789 11941 12267 48993 48993 SILTIPWVELGGK 13 1 0 Unmodified _SILTIPWVELGGK_ 0 0 0 Q59ED9;H7C487;Q9NX98;B3KUL5;Q9BXB5 Q59ED9 Q59ED9 OSBPL10 Oxysterol-binding protein;Oxysterol-binding protein-related protein 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.9173 2 706.911027 1411.8075 NaN NaN NaN 0.071358 5.0443E-05 NaN NaN NaN NaN 128.02 0.32308 128.02 127.85 128.18 0 0 0 0 0.0022097 1 83454 70.977 30.932 1 NaN NaN 0 1288900 0 1288900 31424 947 11942 12268 48994 48994 SILTIPWVELGGK 13 1 0 Unmodified _SILTIPWVELGGK_ 0 0 0 Q59ED9;H7C487;Q9NX98;B3KUL5;Q9BXB5 Q59ED9 Q59ED9 OSBPL10 Oxysterol-binding protein;Oxysterol-binding protein-related protein 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.9189 2 706.911027 1411.8075 NaN NaN NaN -0.23254 -0.00016438 NaN NaN NaN NaN 127.63 0.31832 127.63 127.45 127.77 -7.6294E-06 0 0 0 0.0023745 1 85273 69.979 29.934 1 NaN NaN 0 2572100 0 2572100 31425 947 11942 12268 48995 48995 SILTQIDHILMDK 13 1 0 Oxidation (M) _SILTQIDHILM(ox)DK_ SILTQIDHILM(1)DK SILTQIDHILM(59.61)DK 0 1 0 Q9NY61;A0A087WWS8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.9515 3 514.94472 1541.81233 85204.41 0.5992 0.00030855 -0.2767 -0.00014249 0.3225 0.00016607 514.944534315477 517.615961301347 120.36 0.97927 120.36 119.9 120.88 -7.6294E-06 197 69 4 0 0 0 0.00025366 1 77369 59.607 41.469 1 1.0399 1.084 0 16817000 8749500 8067200 31426 2080 11943 12269 48996 48996 1915 SILTQIDHILMDK 13 1 0 Oxidation (M) _SILTQIDHILM(ox)DK_ SILTQIDHILM(1)DK SILTQIDHILM(45.88)DK 0 1 0 Q9NY61;A0A087WWS8 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.9146 2 771.913441 1541.81233 NaN NaN NaN -1.7472 -0.0013487 NaN NaN NaN NaN 120.2 0.35201 120.2 119.9 120.25 0 0 0 0 0.0074622 1 77371 45.879 12.013 1 NaN NaN 0 6320200 6320200 0 31427 2080 11943 12269 48997 48997 1915 SILTQIDHILMDK 13 1 0 Oxidation (M) _SILTQIDHILM(ox)DK_ SILTQIDHILM(1)DK SILTQIDHILM(107.09)DK 0 1 0 Q9NY61;A0A087WWS8 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.9214 2 771.913441 1541.81233 NaN NaN NaN -0.34478 -0.00026614 NaN NaN NaN NaN 120.42 0.93246 120.42 119.9 120.83 -7.6294E-06 0 0 0 2.6589E-09 1 77745 107.09 75.658 1 NaN NaN 0 12386000 0 12386000 31428 2080 11943 12269 48998 48998 1915 SILTQIDHILMDK 13 1 0 Oxidation (M) _SILTQIDHILM(ox)DK_ SILTQIDHILM(1)DK SILTQIDHILM(94.47)DK 0 1 0 Q9NY61;A0A087WWS8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.9137 2 771.913441 1541.81233 68215.66 0.80862 0.00062419 -0.4786 -0.00036944 0.33002 0.00025475 772.414337261618 775.92034563764 119.2 0.98421 119.2 118.79 119.78 0 249 68 6 0 0 0 3.7449E-05 2 78537 94.465 51.748 1 1.07 1.2017 0 74966000 36984000 37982000 31429 2080 11943 12269 48999;49000 49000 1915 SILTQIDHILMDK 13 1 0 Oxidation (M) _SILTQIDHILM(ox)DK_ SILTQIDHILM(1)DK SILTQIDHILM(42.79)DK 0 1 0 Q9NY61;A0A087WWS8 Q9NY61 Q9NY61 AATF Protein AATF MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.6163 3 514.94472 1541.81233 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.95 1 118.95 118.45 119.45 0 0 0 0 0.0075557 1 78342 42.789 22.95 1 31430 2080 11943 12269 49001 49001 1915 SILTQIDHILMDK 13 1 0 Oxidation (M) _SILTQIDHILM(ox)DK_ SILTQIDHILM(1)DK SILTQIDHILM(75.74)DK 0 1 0 Q9NY61;A0A087WWS8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.9215 2 771.913441 1541.81233 69202.87 0.74806 0.00057744 -0.53235 -0.00041093 0.21571 0.00016651 771.913417307241 775.920440952117 131.44 0.57947 131.44 131.17 131.75 0 158 26 8 0 0 0 5.5834E-05 2 79664 75.739 43.731 1 1.3877 1.0787 0 12572000 5754600 6817400 31431 2080 11943 12269 49002;49003 49002 1915 SILTQIDHILMDK 13 1 0 Oxidation (M) _SILTQIDHILM(ox)DK_ SILTQIDHILM(1)DK SILTQIDHILM(114.24)DK 0 1 0 Q9NY61;A0A087WWS8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.921 2 771.913441 1541.81233 69198.27 1.0551 0.00081444 0.045209 3.4898E-05 1.1003 0.00084934 771.913503164475 775.920578640066 131.12 0.66655 131.12 130.79 131.45 0 140 30 8 0 0 0 5.2471E-09 2 78572 114.24 63.147 1 1.29 1.034 0 19560000 8823900 10736000 31432 2080 11943 12269 49004;49005 49004 1915 SILVPNEELSMVMSSK 16 1 0 2 Oxidation (M) _SILVPNEELSM(ox)VM(ox)SSK_ SILVPNEELSM(1)VM(1)SSK SILVPNEELSM(71.55)VM(71.55)SSK 0 2 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.9577 2 898.444445 1794.87434 65290.82 0.42717 0.00038378 -0.23985 -0.00021549 0.18732 0.00016829 898.946454586814 902.953467324417 88.489 0.2662 88.489 88.355 88.621 0 55 24 4 0 0 0 0.00018509 1 54584 71.548 61.222 1 2.7175 2.9254 0 21628000 5073000 16555000 31433 1945 11944 12270 49006 49006 1790;1791 SILVPNEELSMVMSSK 16 1 0 2 Oxidation (M) _SILVPNEELSM(ox)VM(ox)SSK_ SILVPNEELSM(1)VM(1)SSK SILVPNEELSM(47.71)VM(47.71)SSK 0 2 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 898.4443 2 898.444445 1794.87434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.428 1 88.428 87.928 88.928 0 0 0 0 0.006758 1 54539 47.712 33.477 1 31434 1945 11944 12270 49007 49007 1790;1791 SILVSPTGPSR 11 0 1 Unmodified _SILVSPTGPSR_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.3177 2 557.316763 1112.61897 82410.82 0.77839 0.00043381 -0.030504 -1.7E-05 0.74788 0.00041681 557.316510752234 562.320998760382 56.362 0.60221 56.362 56.063 56.665 3.8147E-06 205 52 6 0 0 0 0.001099 3 31687 70.1 46.672 1 1.0804 1.1053 0 33238000 15667000 17572000 31435 1740 11945 12271 49008;49009;49010 49009 SILVSPTGPSR 11 0 1 Unmodified _SILVSPTGPSR_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.3218 2 557.316763 1112.61897 79949.14 0.40814 0.00022747 0.29579 0.00016485 0.70393 0.00039231 557.316661619055 562.32122212444 55.257 0.66042 55.257 54.981 55.641 0 186 48 6 0 0 0 0.00042951 2 31644 79.16 46.528 1 1.0707 1.1629 0 28263000 16104000 12159000 31436 1740 11945 12271 49011;49012 49011 SIMTIVGHTDVVK 13 1 0 Oxidation (M) _SIM(ox)TIVGHTDVVK_ SIM(1)TIVGHTDVVK SIM(60)TIVGHTDVVK 0 1 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.3884 2 708.381777 1414.749 72958.88 0.73887 0.00052341 -0.30318 -0.00021477 0.43569 0.00030864 708.381144597971 712.388723425467 56.766 0.41641 56.766 56.606 57.022 0 115 32 5 0 0 0 0.0004384 1 32706 60 50.313 1 1.3185 1.3352 0 16517000 6559000 9958000 31437 1792 11946 12272 49013 49013 1658 SIMTIVGHTDVVK 13 1 0 Oxidation (M) _SIM(ox)TIVGHTDVVK_ SIM(1)TIVGHTDVVK SIM(90.05)TIVGHTDVVK 0 1 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.3898 2 708.381777 1414.749 73542.93 0.43561 0.00030858 -0.28911 -0.0002048 0.1465 0.00010378 708.381652248266 712.388699008057 57.247 0.52327 57.247 57.04 57.564 0 125 40 6 0 0 0 6.3187E-05 1 33052 90.05 90.05 1 1.5642 1.6152 0 18380000 7210600 11169000 31438 1792 11946 12272 49014 49014 1658 SIMTIVGHTDVVK 13 1 0 Unmodified _SIMTIVGHTDVVK_ 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.3918 2 700.384319 1398.75409 72708.8 0.31892 0.00022336 -0.36206 -0.00025358 -0.043148 -3.022E-05 700.383695853927 704.391160569098 89.538 0.50891 89.538 89.289 89.798 0 158 32 8 0 0 0 0.00011541 1 48687 74.611 74.611 1 1.4657 1.196 0 6206800 2619300 3587400 31439 1792 11946 12273 49015 49015 SINNNTAICVEGK 13 1 0 Unmodified _SINNNTAICVEGK_ 0 0 0 Q6P0N0;G5E9K5;H7C1S6 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3495 2 710.348465 1418.68238 NaN NaN NaN -0.34358 -0.00024406 NaN NaN NaN NaN 41.815 0.29765 41.815 41.674 41.971 -3.8147E-06 0 0 0 0.0019329 1 22078 72.652 51.782 1 NaN NaN 0 5807100 5807100 0 31440 1849 11947 12274 49016 49016 SINPDEAVAYGAAVQAAILMGDK 23 1 0 Oxidation (M) _SINPDEAVAYGAAVQAAILM(ox)GDK_ SINPDEAVAYGAAVQAAILM(1)GDK SINPDEAVAYGAAVQAAILM(110.56)GDK 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1165.088 2 1160.57811 2319.14166 54592.26 0.32613 0.0003785 0.32694 0.00037944 0.65307 0.00075793 1161.07998346826 1165.08755061492 126.24 0.77374 126.24 125.9 126.67 0 375 59 10 0 0 0 3.1043E-17 2 82048 110.56 110.56 1 1.0234 1.1105 0 45635000 22608000 23027000 31441 533 11948 12275 49017;49018 49017 395 SINPDEAVAYGAAVQAAILMGDK 23 1 0 Oxidation (M) _SINPDEAVAYGAAVQAAILM(ox)GDK_ SINPDEAVAYGAAVQAAILM(1)GDK SINPDEAVAYGAAVQAAILM(121.82)GDK 0 1 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1165.0905 2 1160.57811 2319.14166 55708.38 0.37735 0.00043794 0.22565 0.00026189 0.603 0.00069983 1161.07955963115 1164.58532169934 125.9 0.76247 125.9 125.59 126.35 0 307 47 10 0 0 0 3.6306E-23 1 83802 121.82 121.82 1 0.97242 1.0802 0 49923000 25880000 24043000 31442 533 11948 12275 49019 49019 395 SINPDEAVAYGAAVQAAILSGDK 23 1 0 Unmodified _SINPDEAVAYGAAVQAAILSGDK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1134.5829 2 1130.57642 2259.13829 56507.92 0.41392 0.00046796 0.087083 9.8454E-05 0.501 0.00056642 1131.07794666626 1135.0849939488 126.49 0.96874 126.49 126.12 127.09 -7.6294E-06 482 68 11 0 0 0 0.00094299 1 82171 34.498 34.498 1 1.3596 1.5345 0 135190000 57246000 77945000 31443 1467 11949 12276 49020 49020 SINPDEAVAYGAAVQAAILSGDK 23 1 0 Unmodified _SINPDEAVAYGAAVQAAILSGDK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1134.5861 2 1130.57642 2259.13829 57165.11 0.46917 0.00053044 0.054718 6.1863E-05 0.52389 0.0005923 1131.0778247572 1135.08496683896 126.08 1.0722 126.08 125.8 126.87 0 422 66 10 0 0 0 2.364E-22 1 84004 114.28 114.28 1 1.3711 1.5821 0 188620000 78640000 109980000 31444 1467 11949 12276 49021 49021 SINPDEAVAYGAAVQAAILSGDK 23 1 0 Unmodified _SINPDEAVAYGAAVQAAILSGDK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1130.5747 2 1130.57642 2259.13829 NaN NaN NaN -0.28981 -0.00032766 NaN NaN NaN NaN 134.72 0.2438 134.72 134.56 134.8 0 0 0 0 1.6796E-19 1 82377 103.88 91.904 1 NaN NaN 0 37322000 37322000 0 31445 1467 11949 12276 49022 49022 SINPDEAVAYGAAVQAAILSGDK 23 1 0 Unmodified _SINPDEAVAYGAAVQAAILSGDK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1135.0773 2 1130.57642 2259.13829 55924.75 0.39499 0.00044657 0.12483 0.00014113 0.51983 0.0005877 1131.07758158252 1134.58377671949 134.69 0.42068 134.69 134.53 134.95 0 35 9 9 0 0 0 8.4742E-17 1 81449 109.87 109.87 1 0.925 0.78629 0 76768000 31588000 45180000 31446 1467 11949 12276 49023 49023 SINPLGGFVHYGEVTNDFVMLK 22 1 0 Oxidation (M) _SINPLGGFVHYGEVTNDFVM(ox)LK_ SINPLGGFVHYGEVTNDFVM(1)LK SINPLGGFVHYGEVTNDFVM(94.84)LK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.4173 3 818.410504 2452.20968 66051.02 0.87908 0.00071945 0.039809 3.258E-05 0.91889 0.00075203 818.744989933758 821.416311493528 121.14 1.7295 121.14 120.37 122.1 7.6294E-06 1108 118 13 0 0 0 4.7418E-12 4 78680 94.837 94.837 1 1.772 2.0374 0 204320000 73688000 130630000 31447 1554;936 11950 12277 49024;49025;49026;49027 49026 765 SINPLGGFVHYGEVTNDFVMLK 22 1 0 Oxidation (M) _SINPLGGFVHYGEVTNDFVM(ox)LK_ SINPLGGFVHYGEVTNDFVM(1)LK SINPLGGFVHYGEVTNDFVM(65.45)LK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.4155 3 818.410504 2452.20968 NaN NaN NaN -1.2347 -0.0010105 NaN NaN NaN NaN 120.23 0.78961 120.23 119.71 120.5 0 0 0 0 1.1043E-06 1 77412 65.454 57.5 1 NaN NaN 0 10341000 0 10341000 31448 1554;936 11950 12277 49028 49028 765 SINPLGGFVHYGEVTNDFVMLK 22 1 0 Oxidation (M) _SINPLGGFVHYGEVTNDFVM(ox)LK_ SINPLGGFVHYGEVTNDFVM(1)LK SINPLGGFVHYGEVTNDFVM(90.88)LK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.4166 3 818.410504 2452.20968 66188.59 1.0988 0.00089929 0.017717 1.45E-05 1.1165 0.00091379 818.745045054107 821.416337283786 120.45 1.97 120.45 119.26 121.23 0 1208 137 12 0 0 0 8.3312E-12 3 79414 90.884 90.884 1 1.786 2.0822 0 257090000 90358000 166730000 31449 1554;936 11950 12277 49029;49030;49031 49030 765 SINPLGGFVHYGEVTNDFVMLK 22 1 0 Oxidation (M) _SINPLGGFVHYGEVTNDFVM(ox)LK_ SINPLGGFVHYGEVTNDFVM(1)LK SINPLGGFVHYGEVTNDFVM(55.23)LK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 821.4169 3 818.410504 2452.20968 66064.91 1.021 0.00083564 -0.47452 -0.00038835 0.54653 0.00044728 818.744645220285 821.415765019381 132.11 0.97009 132.11 131.85 132.82 0 353 44 13 0 0 0 1.2089E-07 2 80189 55.228 55.228 1 0.68134 0.58629 0 91046000 53511000 37536000 31450 1554;936 11950 12277 49032;49033 49033 765 SINPLGGFVHYGEVTNDFVMLK 22 1 0 Oxidation (M) _SINPLGGFVHYGEVTNDFVM(ox)LK_ SINPLGGFVHYGEVTNDFVM(1)LK SINPLGGFVHYGEVTNDFVM(59.81)LK 0 1 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 821.4166 3 818.410504 2452.20968 65801.49 1.1592 0.00094873 0.11226 9.1879E-05 1.2715 0.0010406 818.74527763837 821.416152526133 131.84 0.89288 131.84 131.56 132.46 0 306 36 14 0 0 0 5.5549E-08 2 79085 59.814 59.539 1 0.69193 0.59467 0 155030000 92451000 62580000 31451 1554;936 11950 12277 49034;49035 49035 765 SINPLGGFVHYGEVTNDFVMLK 22 1 0 Unmodified _SINPLGGFVHYGEVTNDFVMLK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.4142 3 813.078866 2436.21477 69655 0.9147 0.00074373 -0.14661 -0.00011921 0.76809 0.00062452 813.413241460472 816.084306517626 126.17 0.65314 126.17 125.71 126.36 -7.6294E-06 168 48 6 0 0 0 0.0012514 1 81848 27.61 27.61 1 0.59992 0.59459 0 8235000 4738900 3496200 31452 1554;936 11950 12278 49036 49036 SINPLGGFVHYGEVTNDFVMLK 22 1 0 Unmodified _SINPLGGFVHYGEVTNDFVMLK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.4128 3 813.078866 2436.21477 70218.33 1.0969 0.00089185 -0.44786 -0.00036415 0.64902 0.0005277 813.412730651146 816.084717355569 126.78 0.44267 126.78 126.6 127.05 -7.6294E-06 101 28 6 0 0 0 1.0957E-06 1 82577 49.089 49.089 1 0.73038 0.76785 0 3870000 1859600 2010300 31453 1554;936 11950 12278 49037 49037 SINPLGGFVHYGEVTNDFVMLK 22 1 0 Unmodified _SINPLGGFVHYGEVTNDFVMLK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.7504 3 813.078866 2436.21477 67950.42 0.85039 0.00069143 -0.029499 -2.3985E-05 0.82089 0.00066745 813.413705895726 816.084181685531 125.45 0.7513 125.45 124.94 125.69 0 228 53 7 0 0 0 0.0010927 3 83500 28.813 28.813 1 0.64756 0.65474 0 8789000 5566600 3222400 31454 1554;936 11950 12278 49038;49039;49040 49039 SINPLGGFVHYGEVTNDFVMLK 22 1 0 Unmodified _SINPLGGFVHYGEVTNDFVMLK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.0795 3 813.078866 2436.21477 67982.97 0.88152 0.00071674 0.25415 0.00020664 1.1357 0.00092338 813.413292241782 815.750493381034 125.8 0.61182 125.8 125.57 126.18 0 117 37 6 0 0 0 0.0011333 1 84000 28.505 28.505 1 0.60663 0.61174 0 7710200 4911900 2798300 31455 1554;936 11950 12278 49041 49041 SINPLGGFVHYGEVTNDFVMLK 22 1 0 Unmodified _SINPLGGFVHYGEVTNDFVMLK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 813.4146 3 813.078866 2436.21477 66490.89 1.2012 0.00097671 0.047851 3.8907E-05 1.2491 0.0010156 813.413661134539 816.084576262646 134.39 0.45296 134.39 134.1 134.56 0 108 20 12 0 0 0 7.6337E-13 2 82032 99.366 99.366 1 1.1958 1.0301 0 95527000 43061000 52466000 31456 1554;936 11950 12278 49042;49043 49042 SINPLGGFVHYGEVTNDFVMLK 22 1 0 Unmodified _SINPLGGFVHYGEVTNDFVMLK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 816.4189 3 813.078866 2436.21477 67213.66 0.91749 0.00074599 -0.27471 -0.00022336 0.64278 0.00052263 813.41321698682 816.084285745721 134.33 0.41037 134.33 134.12 134.53 0 96 18 12 0 0 0 9.8527E-12 2 81076 91.128 91.128 1 1.0989 0.93714 0 94468000 44790000 49677000 31457 1554;936 11950 12278 49044;49045 49045 SINQQSGAHVELQR 14 0 1 Unmodified _SINQQSGAHVELQR_ 0 0 0 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.9025 2 783.902785 1565.79102 69628.15 0.64841 0.00050829 0.056948 4.4642E-05 0.70535 0.00055293 784.404154093646 788.906840157872 27.761 0.23322 27.761 27.657 27.89 0 49 14 7 0 0 0 2.6097E-09 2 12958 137.84 137.84 1 2.0569 2.1133 0 19467000 5529900 13938000 31458 245 11951 12279 49046;49047 49047 SINQQSGAHVELQR 14 0 1 Unmodified _SINQQSGAHVELQR_ 0 0 0 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.9076 2 783.902785 1565.79102 69226.94 0.55962 0.00043869 0.5785 0.00045349 1.1381 0.00089218 783.903551988814 788.90713675954 27.18 0.22542 27.18 27.059 27.285 0 41 11 5 0 0 0 1.2168E-46 1 12507 181.98 181.98 1 1.8098 1.801 0 8870700 3794600 5076100 31459 245 11951 12279 49048 49048 SINQQSGAHVELQR 14 0 1 Unmodified _SINQQSGAHVELQR_ 0 0 0 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.9376 3 522.937615 1565.79102 83443.43 0.26824 0.00014027 0.011306 5.9126E-06 0.27954 0.00014618 522.937535231778 526.273883668167 27.188 0.28588 27.188 27.034 27.32 0 79 14 8 0 0 0 1.31E-06 2 12522 100.11 100.11 1 1.7033 1.869 0 40262000 12986000 27276000 31460 245 11951 12279 49049;49050 49050 SINQQSGAHVELQR 14 0 1 Unmodified _SINQQSGAHVELQR_ 0 0 0 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 526.2741 3 522.937615 1565.79102 83783.48 0.078076 4.0829E-05 -0.31603 -0.00016527 -0.23796 -0.00012444 522.937648056325 526.273684367541 31.882 0.29138 31.882 31.708 31.999 0 71 15 7 0 0 0 0.001477 1 13566 39.033 39.033 1 1.1438 0.95553 0 3326800 1449300 1877400 31461 245 11951 12279 49051 49051 SIPALVR 7 0 1 Unmodified _SIPALVR_ 0 0 0 P42695;G3V1A9;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 378.2424 2 378.242338 754.470124 98033.36 -0.23843 -9.0184E-05 0.034571 1.3076E-05 -0.20386 -7.7107E-05 378.24230009267 383.246388641491 58.425 0.77031 58.425 58.034 58.804 -3.8147E-06 233 62 5 0 0 0 0.036835 1 33004 61.123 21.904 1 0.85572 0.87871 0 25631000 12878000 12753000 31462 1565 11952 12280 49052 49052 SIPALVR 7 0 1 Unmodified _SIPALVR_ 0 0 0 P42695;G3V1A9;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 378.2426 2 378.242338 754.470124 97926.37 0.032333 1.223E-05 -0.12922 -4.8878E-05 -0.096891 -3.6648E-05 378.242248321097 383.246276723354 57.294 0.80801 57.294 56.853 57.661 0 232 62 5 0 0 0 0.028795 1 32983 71.359 22.048 1 0.938 0.99634 0 24084000 10901000 13183000 31463 1565 11952 12280 49053 49053 SIPLDEGEDEAQR 13 0 1 Unmodified _SIPLDEGEDEAQR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.8439 2 729.838985 1457.66342 NaN NaN NaN 0.27809 0.00020296 NaN NaN NaN NaN 47.081 0.43724 47.081 46.868 47.305 0 0 0 0 0.0029073 2 26027 67.153 52.463 1 NaN NaN 0 9039800 0 9039800 31464 1729 11953 12281 49054;49055 49054 SIPSDPEER 9 0 1 Unmodified _SIPSDPEER_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.2459 2 515.246003 1028.47745 83491.61 0.37764 0.00019458 -0.41731 -0.00021502 -0.039675 -2.0443E-05 515.24583007473 520.250145281508 25.239 0.47529 25.239 24.994 25.469 0 111 22 8 0 0 0 0.012314 2 10919 57.59 35.098 1 0.74772 0.77645 0 22423000 12258000 10165000 31465 1366 11954 12282 49056;49057 49057 SIPSDPEER 9 0 1 Unmodified _SIPSDPEER_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.2503 2 515.246003 1028.47745 83941.78 0.34863 0.00017963 -0.50427 -0.00025982 -0.15564 -8.0191E-05 515.245790181949 520.250188767526 24.996 0.78624 24.996 24.494 25.28 0 87 33 6 0 0 0 0.015061 2 10662 55.112 32.62 1 0.79611 0.87157 0 32738000 19785000 12954000 31466 1366 11954 12282 49058;49059 49059 SIPSLVDGFKPGQR 14 1 1 Unmodified _SIPSLVDGFKPGQR_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.9515 3 500.943819 1499.80963 85237.31 0.11684 5.8528E-05 0.18592 9.3136E-05 0.30276 0.00015166 500.943955216385 506.951431527525 81.242 0.77016 81.242 80.917 81.687 0 289 66 7 0 0 0 0.0001049 2 48396 65.472 53.111 1 0.49126 0.58089 0 38648000 23274000 15374000 31467 1679 11955 12283 49060;49061 49061 SIPSLVDGFKPGQR 14 1 1 Unmodified _SIPSLVDGFKPGQR_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.9241 2 750.91209 1499.80963 71457.7 0.37584 0.00028222 -0.00097752 -7.3403E-07 0.37486 0.00028149 750.91200555097 759.923578450865 81.233 0.65288 81.233 80.969 81.622 0 269 55 7 0 0 0 4.2247E-06 2 48374 96.015 96.015 1 0.58707 0.69234 0 35603000 18970000 16633000 31468 1679 11955 12283 49062;49063 49062 SIPSLVDGFKPGQR 14 1 1 Unmodified _SIPSLVDGFKPGQR_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.9439 3 500.943819 1499.80963 85479.8 0.44724 0.00022404 0.52545 0.00026322 0.97269 0.00048726 500.943992012711 506.951327278633 79.95 0.69714 79.95 79.644 80.341 0 257 55 8 0 0 0 0.00010825 1 48531 50.843 50.843 1 0.58734 0.69057 0 69089000 46006000 23083000 31469 1679 11955 12283 49064 49064 SIPSLVDGFKPGQR 14 1 1 Unmodified _SIPSLVDGFKPGQR_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.9238 2 750.91209 1499.80963 70884.68 0.78375 0.00058853 0.063707 4.7839E-05 0.84746 0.00063636 750.912026648731 759.923318380827 79.984 0.54127 79.984 79.693 80.235 7.6294E-06 204 42 6 0 0 0 0.00046715 2 48719 96.015 96.015 1 0.53807 0.63079 0 56427000 34445000 21982000 31470 1679 11955 12283 49065;49066 49066 SIPSLVDGFKPGQR 14 1 1 Unmodified _SIPSLVDGFKPGQR_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.9444 3 500.943819 1499.80963 85217.35 0.34834 0.0001745 -0.23076 -0.0001156 0.11759 5.8905E-05 500.943781971001 506.951174296699 92.788 0.77008 92.788 92.527 93.297 0 205 45 8 0 0 0 0.0031583 2 51693 44.511 41.066 1 0.97585 0.84145 0 12558000 5773400 6784800 31471 1679 11955 12283 49067;49068 49067 SIPSLVDGFKPGQR 14 1 1 Unmodified _SIPSLVDGFKPGQR_ 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.9516 3 500.943819 1499.80963 86120.09 0.015802 7.9161E-06 0.17864 8.9487E-05 0.19444 9.7404E-05 500.943896023411 506.951286024683 92.543 0.79903 92.543 92.15 92.949 0 211 44 9 0 0 0 0.0064428 2 50737 35.657 35.657 1 0.99237 0.83649 0 8408600 4064200 4344400 31472 1679 11955 12283 49069;49070 49070 SIPSMVDGLK 10 1 0 Oxidation (M) _SIPSM(ox)VDGLK_ SIPSM(1)VDGLK SIPSM(56.26)VDGLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.7856 2 531.778625 1061.5427 81886.25 0.15278 8.1245E-05 0.14681 7.8073E-05 0.29959 0.00015932 531.778728309412 535.785644295114 53.039 0.93761 53.039 52.594 53.531 -3.8147E-06 381 71 8 0 0 0 0.0040223 2 29457 56.258 26.183 1 0.99544 1.1386 0 185300000 92349000 92952000 31473 1471 11956 12284 49071;49072 49071 1211 SIPSMVDGLK 10 1 0 Oxidation (M) _SIPSM(ox)VDGLK_ SIPSM(1)VDGLK SIPSM(56.26)VDGLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.7861 2 531.778625 1061.5427 82501.41 0.28959 0.000154 -0.091543 -4.8681E-05 0.19805 0.00010532 531.778659539125 535.785604253338 54.004 0.87631 54.004 53.531 54.408 0 332 70 7 0 0 0 0.0040223 1 30160 56.258 29.874 1 0.96355 1.1114 0 217090000 111920000 105170000 31474 1471 11956 12284 49073 49073 1211 SIPSMVDGLK 10 1 0 Oxidation (M) _SIPSM(ox)VDGLK_ SIPSM(1)VDGLK SIPSM(56.26)VDGLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.7855 2 531.778625 1061.5427 80375.13 0.27072 0.00014396 -0.060189 -3.2007E-05 0.21053 0.00011196 531.778568637703 535.785535596884 51.738 0.99058 51.738 51.301 52.291 0 400 76 8 0 0 0 0.0040223 1 29281 56.258 29.874 1 0.96471 1.1276 0 286080000 149650000 136440000 31475 1471 11956 12284 49074 49074 1211 SIPSMVDGLK 10 1 0 Oxidation (M) _SIPSM(ox)VDGLK_ SIPSM(1)VDGLK SIPSM(47.2)VDGLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.7859 2 531.778625 1061.5427 82113.13 0.50361 0.00026781 0.14478 7.6992E-05 0.6484 0.0003448 531.778724121082 535.785727142412 52.66 0.98447 52.66 52.155 53.14 -3.8147E-06 353 78 6 0 0 0 0.00924 2 29930 47.198 24.458 1 0.98381 1.1322 0 176620000 89475000 87144000 31476 1471 11956 12284 49075;49076 49075 1211 SIPSMVDGLKPGQR 14 1 1 Oxidation (M) _SIPSM(ox)VDGLKPGQR_ SIPSM(1)VDGLKPGQR SIPSM(54.9)VDGLKPGQR 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.9345 3 500.932814 1499.77661 82520.86 0.50557 0.00025326 -0.16204 -8.117E-05 0.34353 0.00017209 500.932820311187 506.940241779691 45.063 0.84204 45.063 44.71 45.552 0 469 76 8 0 0 0 0.00031822 2 24113 54.898 54.898 1 0.93286 1.1324 0 358390000 189040000 169350000 31477 1471 11957 12285 49077;49078 49078 1211 SIPSMVDGLKPGQR 14 1 1 Oxidation (M) _SIPSM(ox)VDGLKPGQR_ SIPSM(1)VDGLKPGQR SIPSM(68.54)VDGLKPGQR 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.9061 2 750.895583 1499.77661 69496.05 0.49625 0.00037263 0.13062 9.8083E-05 0.62687 0.00047071 750.895587401144 759.906937470925 44.907 0.2285 44.907 44.788 45.016 0 64 20 5 0 0 0 0.00017442 2 24128 68.536 68.536 1 1.3722 1.6474 0 64599000 27248000 37351000 31478 1471 11957 12285 49079;49080 49080 1211 SIPSMVDGLKPGQR 14 1 1 Oxidation (M) _SIPSM(ox)VDGLKPGQR_ SIPSM(1)VDGLKPGQR SIPSM(40.28)VDGLKPGQR 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.9325 3 500.932814 1499.77661 81554.43 0.12736 6.38E-05 -0.070514 -3.5323E-05 0.056848 2.8477E-05 500.932915350194 506.94030501393 45.904 1.0119 45.904 45.459 46.471 -3.8147E-06 513 88 11 0 0 0 0.001882 1 24622 40.278 40.278 1 0.93294 1.1345 0 469940000 240290000 229650000 31479 1471 11957 12285 49081 49081 1211 SIPSMVDGLKPGQR 14 1 1 Oxidation (M) _SIPSM(ox)VDGLKPGQR_ SIPSM(1)VDGLKPGQR SIPSM(102.52)VDGLKPGQR 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.4088 2 750.895583 1499.77661 69231.55 0.4019 0.00030178 0.13165 9.8853E-05 0.53355 0.00040064 750.895631420543 759.906915016532 45.865 0.55659 45.865 45.625 46.182 0 149 50 7 0 0 0 2.9181E-06 1 24658 102.52 92.836 1 1.1096 1.3395 0 151490000 74372000 77120000 31480 1471 11957 12285 49082 49082 1211 SIPSMVDGLKPGQR 14 1 1 Oxidation (M) _SIPSM(ox)VDGLKPGQR_ SIPSM(1)VDGLKPGQR SIPSM(83.86)VDGLKPGQR 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.397 2 750.895583 1499.77661 69381.46 1.5833 0.0011889 -0.5878 -0.00044137 0.99553 0.00074754 750.895287833294 759.906365372154 43.916 0.4722 43.916 43.647 44.119 0 206 39 7 0 0 0 9.1727E-05 2 23809 83.862 83.862 1 0.96048 1.1342 0 138020000 72029000 65989000 31481 1471 11957 12285 49083;49084 49084 1211 SIPSMVDGLKPGQR 14 1 1 Oxidation (M) _SIPSM(ox)VDGLKPGQR_ SIPSM(1)VDGLKPGQR SIPSM(63.76)VDGLKPGQR 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.9404 3 500.932814 1499.77661 82616.13 1.3455 0.00067399 -0.77992 -0.00039069 0.56554 0.0002833 500.932614318609 506.939941510842 43.911 0.78273 43.911 43.575 44.358 0 421 66 10 0 0 0 5.9993E-05 3 23792 63.76 63.76 1 0.93355 1.1092 0 369640000 208400000 161230000 31482 1471 11957 12285 49085;49086;49087 49085 1211 SIPSMVDGLKPGQR 14 1 1 Oxidation (M) _SIPSM(ox)VDGLKPGQR_ SIPSM(1)VDGLKPGQR SIPSM(61.21)VDGLKPGQR 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2679 3 500.932814 1499.77661 83056.75 0.56443 0.00028274 0.029009 1.4531E-05 0.59344 0.00029727 500.933027530488 506.940259144661 44.629 0.83375 44.629 44.219 45.053 0 410 68 11 0 0 0 9.6518E-05 2 24337 61.212 61.212 1 0.95381 1.1339 0 403800000 206020000 197770000 31483 1471 11957 12285 49088;49089 49089 1211 SIPSMVDGLKPGQR 14 1 1 Oxidation (M) _SIPSM(ox)VDGLKPGQR_ SIPSM(1)VDGLKPGQR SIPSM(72.2)VDGLKPGQR 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.9077 2 750.895583 1499.77661 69686.29 1.0022 0.00075251 -0.3087 -0.0002318 0.69346 0.00052072 750.895691698089 759.906548476394 44.528 0.1559 44.528 44.399 44.555 0 54 12 6 0 0 0 0.00015257 2 24298 72.2 72.2 1 1.6837 1.9806 0 74955000 26182000 48773000 31484 1471 11957 12285 49090;49091 49090 1211 SIPSMVDGLKPGQR 14 1 1 Oxidation (M) _SIPSM(ox)VDGLKPGQR_ SIPSM(1)VDGLKPGQR SIPSM(69.98)VDGLKPGQR 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.9069 2 750.895583 1499.77661 70436.91 0.41726 0.00031332 -0.18246 -0.00013701 0.2348 0.00017631 750.895500262814 759.906701440733 53.46 0.6285 53.46 53.181 53.809 0 263 44 8 0 0 0 0.00016581 2 25924 69.979 69.979 1 0.95982 0.81173 0 10368000 5495000 4873000 31485 1471 11957 12285 49092;49093 49092 1211 SIPSMVDGLKPGQR 14 1 1 Unmodified _SIPSMVDGLKPGQR_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.9096 2 742.898125 1483.7817 68385.13 0.55305 0.00041086 -0.25558 -0.00018987 0.29747 0.00022099 742.897856162343 751.909410249893 77.367 0.90239 77.367 76.938 77.84 0 368 62 9 0 0 0 0.001264 2 41260 64.439 64.439 1 1.4292 1.2476 0 23289000 9713700 13576000 31486 1471 11957 12286 49094;49095 49094 SIPSMVDGLKPGQR 14 1 1 Unmodified _SIPSMVDGLKPGQR_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.6092 3 495.601176 1483.7817 84365.61 0.11336 5.6181E-05 0.18829 9.3318E-05 0.30165 0.0001495 495.601229721092 501.608917343164 77.354 0.87215 77.354 77.011 77.883 7.6294E-06 357 61 9 0 0 0 0.009356 2 41310 38.799 38.799 1 1.5139 1.3109 0 15481000 6427200 9053600 31487 1471 11957 12286 49096;49097 49097 SIPSMVDGLKPGQR 14 1 1 Unmodified _SIPSMVDGLKPGQR_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 742.8988 2 742.898125 1483.7817 69109.64 0.56707 0.00042127 -0.26669 -0.00019813 0.30037 0.00022315 742.897892843248 751.909399558959 77.539 0.93121 77.539 77.18 78.112 0 323 61 9 0 0 0 0.0057378 2 40610 56.359 46.672 1 1.5075 1.2786 0 18791000 7642100 11149000 31488 1471 11957 12286 49098;49099 49099 SIPSMVDGLKPGQR 14 1 1 Unmodified _SIPSMVDGLKPGQR_ 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.6093 3 495.601176 1483.7817 84196.38 0.16288 8.0724E-05 0.16698 8.2758E-05 0.32987 0.00016348 495.601216811613 501.608912642643 77.549 0.81431 77.549 77.241 78.055 0 303 53 8 0 0 0 0.0009439 1 40575 39.509 39.509 1 1.4846 1.2576 0 14574000 5752300 8822100 31489 1471 11957 12286 49100 49100 SIPTLISR 8 0 1 Unmodified _SIPTLISR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.7755 2 443.77146 885.528367 91530.39 -0.16355 -7.258E-05 0.45085 0.00020008 0.2873 0.0001275 443.771495085135 448.775492867402 70.012 1.0201 70.012 69.512 70.532 0 350 90 5 0 0 0 0.02313 1 40638 56.721 23.205 1 0.79721 0.88177 0 59385000 31461000 27924000 31490 550 11958 12287 49101 49101 SIPTLISR 8 0 1 Unmodified _SIPTLISR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.7711 2 443.77146 885.528367 91784.45 0.019416 8.6164E-06 0.55528 0.00024642 0.57469 0.00025503 443.771510899771 448.775548049325 68.753 0.98592 68.753 68.275 69.261 0 336 82 5 0 0 0 0.02313 1 40787 56.721 23.205 1 0.77701 0.89928 0 67745000 38123000 29622000 31491 550 11958 12287 49102 49102 SIPYDQSPGPK 11 1 0 Unmodified _SIPYDQSPGPK_ 0 0 0 B4DSV8;B4DPG9;Q9H3K2;B4DNL0;Q9Y6G2;Q6FIA7 B4DSV8 B4DSV8 GHITM Growth hormone-inducible transmembrane protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.805 2 594.798403 1187.58225 78766.84 0.95833 0.00057001 -0.47873 -0.00028475 0.47959 0.00028526 594.797937168974 598.805267693264 37.971 0.45977 37.971 37.749 38.209 0 133 38 5 0 0 0 0.0055485 1 19363 56.013 56.013 1 2.7751 2.9432 0 15745000 4278700 11466000 31492 1021 11959 12288 49103 49103 SIPYDQSPGPK 11 1 0 Unmodified _SIPYDQSPGPK_ 0 0 0 B4DSV8;B4DPG9;Q9H3K2;B4DNL0;Q9Y6G2;Q6FIA7 B4DSV8 B4DSV8 GHITM Growth hormone-inducible transmembrane protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.8069 2 594.798403 1187.58225 77519.52 0.93209 0.00055441 0.46095 0.00027417 1.393 0.00082858 594.799096808985 598.80546949885 37.014 0.50888 37.014 36.729 37.238 0 133 38 5 0 0 0 0.0023522 1 19109 61.78 61.78 1 1.3028 1.4078 0 22558000 8604500 13954000 31493 1021 11959 12288 49104 49104 SIQEELQQLR 10 0 1 Unmodified _SIQEELQQLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.335 2 622.335684 1242.65681 NaN NaN NaN -0.63703 -0.00039645 NaN NaN NaN NaN 79.497 0.44229 79.497 79.341 79.784 0 0 0 0 0.010494 1 48431 62.823 26.489 1 NaN NaN 0 4548900 4548900 0 31494 1754 11960 12289 49105 49105 SIQEELQQLR 10 0 1 Unmodified _SIQEELQQLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.3395 2 622.335684 1242.65681 NaN NaN NaN -2.4739 -0.0015396 NaN NaN NaN NaN 92.874 0.35036 92.874 92.69 93.04 -7.6294E-06 0 0 0 0.051194 1 50913 46.462 19.948 1 NaN NaN 0 823030 0 823030 31495 1754 11960 12289 49106 49106 SIQEIQELDK 10 1 0 Unmodified _SIQEIQELDK_ 0 0 0 J3KS60;J3KRE2;J3QW41;A0A0S2Z3D9;J3KTF8;V9HWE8;J3QQX2;J3KRY1;P52565 J3KS60 J3KS60 ARHGDIA;HEL-S-47e Rho GDP-dissociation inhibitor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.8254 2 601.816793 1201.61903 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.5 1 60.5 60 61 -3.8147E-06 0 0 0 0.0036289 1 34525 65.933 19.774 1 31496 546 11961 12290 49107 49107 SIQFALR 7 0 1 Unmodified _SIQFALR_ 0 0 0 F8W0Q9;F8WF16;B7Z615;B7Z8L1;F8W6A0;B7Z8M9;B7Z695;Q8NEY8 F8W0Q9 F8W0Q9 PPHLN1 Periphilin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.7455 2 417.745245 833.475937 94284.74 0.27819 0.00011621 0.36425 0.00015216 0.64243 0.00026837 417.745137303432 422.749661127087 70.86 0.77927 70.86 70.471 71.251 -7.6294E-06 197 58 5 0 0 0 0.014977 2 42342 99.511 62.924 1 1.1152 1.1038 0 15423000 7826400 7596100 31497 1264 11962 12291 49108;49109 49109 SIQFVDWCPTGFK 13 1 0 Unmodified _SIQFVDWCPTGFK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;P68366 B3KT06;P68366 B3KT06 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.887 2 792.879401 1583.74425 67728.01 0.95666 0.00075851 -0.10179 -8.0706E-05 0.85487 0.00067781 792.879399736169 796.886524669788 113.38 0.97636 113.38 112.95 113.93 -7.6294E-06 482 70 10 0 0 0 1.0249E-08 2 71573 114.83 114.83 1 1.4664 1.6945 0 224920000 89665000 135260000 31498 922;1659 11963 12292 49110;49111 49110 SIQFVDWCPTGFK 13 1 0 Unmodified _SIQFVDWCPTGFK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;P68366 B3KT06;P68366 B3KT06 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.8878 2 792.879401 1583.74425 67451.71 0.84413 0.0006693 0.022431 1.7785E-05 0.86656 0.00068708 792.879500567822 796.886669175447 112.75 0.79216 112.75 112.43 113.22 -7.6294E-06 411 53 10 0 0 0 8.7208E-10 2 72943 124.42 124.42 1 1.4747 1.7099 0 217180000 91043000 126140000 31499 922;1659 11963 12292 49112;49113 49113 SIQFVDWCPTGFK 13 1 0 Unmodified _SIQFVDWCPTGFK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;P68366 B3KT06;P68366 B3KT06 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.8798 2 792.879401 1583.74425 67929.72 0.78977 0.0006262 -0.19696 -0.00015616 0.59282 0.00047003 793.380853184457 796.886836005066 124.42 1.0132 124.42 124.04 125.05 0 242 43 11 0 0 0 8.5065E-06 2 74481 101.95 101.95 1 1.1867 0.98517 0 45889000 20882000 25007000 31500 922;1659 11963 12292 49114;49115 49115 SIQFVDWCPTGFK 13 1 0 Unmodified _SIQFVDWCPTGFK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;P68366 B3KT06;P68366 B3KT06 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 796.8861 2 792.879401 1583.74425 68027.8 0.81887 0.00064926 -0.27794 -0.00022037 0.54093 0.00042889 792.87915153937 796.886427181875 124.27 0.97005 124.27 123.78 124.75 7.6294E-06 244 40 11 0 0 0 5.7593E-05 2 73451 96.103 96.103 1 1.1943 0.99125 0 36201000 17504000 18697000 31501 922;1659 11963 12292 49116;49117 49117 SIQLDGLVWGASK 13 1 0 Unmodified _SIQLDGLVWGASK_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;Q9BW34;A0A087X1X7;Q71RH4;Q9H7G6;E9PQZ1;H0YE72;H0YE58;E9PQC9 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3823 2 687.374809 1372.73507 NaN NaN NaN -1.2621 -0.00086755 NaN NaN NaN NaN 109.82 0.43192 109.82 109.56 109.99 0 0 0 0 0.00013575 1 68739 90.685 60.431 1 NaN NaN 0 3022100 0 3022100 31502 875 11964 12293 49118 49118 SIQLDGLVWGASK 13 1 0 Unmodified _SIQLDGLVWGASK_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;Q9BW34;A0A087X1X7;Q71RH4;Q9H7G6;E9PQZ1;H0YE72;H0YE58;E9PQC9 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.3821 2 687.374809 1372.73507 NaN NaN NaN -0.33178 -0.00022806 NaN NaN NaN NaN 109.2 0.29014 109.2 109.03 109.32 0 0 0 0 0.0017184 1 70012 73.951 52.503 1 NaN NaN 0 5009600 0 5009600 31503 875 11964 12293 49119 49119 SIQSGPLK 8 1 0 Unmodified _SIQSGPLK_ 0 0 0 B4DS66;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20;Q05DN3 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.2496 2 415.242535 828.470518 94149.14 0.24415 0.00010138 0.72702 0.00030189 0.97117 0.00040327 415.242552663209 419.249918740042 26.444 0.4102 26.444 26.313 26.723 0 105 23 6 0 0 0 0.0092293 1 11879 75.213 25.086 1 0.92377 0.99965 0 43262000 21941000 21322000 31504 1774;1029;1128 11965 12294 49120 49120 SIQSGPLK 8 1 0 Unmodified _SIQSGPLK_ 0 0 0 B4DS66;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20;Q05DN3 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 419.2502 2 415.242535 828.470518 93087.14 0.4655 0.00019329 1.2002 0.00049838 1.6657 0.00069167 415.242782051251 419.250115971543 26.13 0.33447 26.13 25.987 26.321 0 60 16 6 0 0 0 0.012634 2 11590 67.169 13.084 1 1.0519 1.1854 0 60235000 27907000 32328000 31505 1774;1029;1128 11965 12294 49121;49122 49121 SIRPDNMSEYSK 12 1 1 Oxidation (M) _SIRPDNM(ox)SEYSK_ SIRPDNM(1)SEYSK SIRPDNM(138.63)SEYSK 0 1 1 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;B7Z3S4;Q92769;B3KUJ5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.8447 2 721.832648 1441.65074 69929.4 0.70518 0.00050902 -0.0096814 -6.9883E-06 0.6955 0.00050203 721.832682212672 730.844004359048 18.406 0.27793 18.406 18.261 18.539 0 69 11 9 0 0 0 9.5266E-18 2 5316 138.63 127.48 1 1.1492 1.3881 0 164050000 73669000 90377000 31506 1715;1952 11966 12295 49123;49124 49124 1550 SIRPDNMSEYSK 12 1 1 Oxidation (M) _SIRPDNM(ox)SEYSK_ SIRPDNM(1)SEYSK SIRPDNM(160.67)SEYSK 0 1 1 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;B7Z3S4;Q92769;B3KUJ5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.8439 2 721.832648 1441.65074 68680.59 0.4464 0.00032223 -0.08692 -6.2741E-05 0.35948 0.00025949 721.832585754877 730.843857311849 18.368 0.32437 18.368 18.249 18.574 0 41 10 9 0 0 0 3.1487E-23 1 5028 160.67 160.67 1 1.135 1.3349 0 72653000 34077000 38576000 31507 1715;1952 11966 12295 49125 49125 1550 SIRPDNMSEYSK 12 1 1 Oxidation (M) _SIRPDNM(ox)SEYSK_ SIRPDNM(1)SEYSK SIRPDNM(82.07)SEYSK 0 1 1 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;B7Z3S4;Q92769;B3KUJ5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.5574 3 481.557524 1441.65074 85248.25 0.063896 3.077E-05 -0.17385 -8.3717E-05 -0.10995 -5.2947E-05 481.557543638789 487.56497520247 18.368 0.35939 18.368 18.238 18.597 0 49 12 10 0 0 0 5.4255E-05 1 5029 82.069 78.577 1 1.2207 1.4375 0 89463000 42158000 47305000 31508 1715;1952 11966 12295 49126 49126 1550 SIRPLLEGR 9 0 2 Unmodified _SIRPLLEGR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 347.5452 3 347.545219 1039.61383 100520.8 0.40408 0.00014044 -0.38689 -0.00013446 0.017193 5.9754E-06 347.545096324043 354.217179828297 41.52 0.8232 41.52 41.354 42.178 0 321 67 7 0 0 0 0.00024184 2 21861 86.014 47.013 1 0.91332 0.99703 0 182360000 73768000 108590000 31509 303 11967 12296 49127;49128 49127 SIRPLLEGR 9 0 2 Unmodified _SIRPLLEGR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.8143 2 520.81419 1039.61383 82937.44 0.66754 0.00034766 -0.095033 -4.9495E-05 0.57251 0.00029817 520.813904169627 530.822429606613 41.517 0.61687 41.517 41.354 41.971 0 251 51 6 0 0 0 0.03028 1 21886 66.273 32.185 1 0.91362 0.99662 0 142300000 59823000 82474000 31510 303 11967 12296 49129 49129 SIRPLLEGR 9 0 2 Unmodified _SIRPLLEGR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.8158 2 520.81419 1039.61383 82386.43 0.75947 0.00039554 0.4743 0.00024702 1.2338 0.00064256 520.814353329603 530.822593481363 39.813 0.60457 39.813 39.647 40.251 0 214 51 7 0 0 0 0.0083367 2 21158 83.998 35.204 1 1.019 1.2175 0 255200000 120780000 134420000 31511 303 11967 12296 49130;49131 49131 SIRPLLEGR 9 0 2 Unmodified _SIRPLLEGR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 347.5456 3 347.545219 1039.61383 99994.45 0.43586 0.00015148 -0.09366 -3.2551E-05 0.3422 0.00011893 347.545215330552 354.217283015204 39.813 0.85911 39.813 39.635 40.494 0 333 73 8 0 0 0 9.6235E-05 2 21144 94.363 31.54 1 0.95413 1.1505 0 365080000 174200000 190870000 31512 303 11967 12296 49132;49133 49133 SIRPLLEGR 9 0 2 Unmodified _SIRPLLEGR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 347.5452 3 347.545219 1039.61383 100360.7 -0.21912 -7.6153E-05 -0.030601 -1.0635E-05 -0.24972 -8.6788E-05 347.545182084502 354.217328505128 46.81 0.99176 46.81 46.618 47.61 0 264 73 8 0 0 0 0.0025397 2 22586 65.627 35.063 1 1.4451 1.1732 0 45903000 18891000 27012000 31513 303 11967 12296 49134;49135 49135 SIRPLLEGR 9 0 2 Unmodified _SIRPLLEGR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.8228 2 520.81419 1039.61383 83467.4 0.14499 7.551E-05 0.61914 0.00032246 0.76413 0.00039797 520.814328283986 530.822751168757 46.822 0.83378 46.822 46.581 47.415 0 211 61 8 0 0 0 0.01927 1 22603 71.451 26.369 1 1.4394 1.174 0 38287000 15962000 22325000 31514 303 11967 12296 49136 49136 SIRPLLEGR 9 0 2 Unmodified _SIRPLLEGR_ 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 354.2172 3 347.545219 1039.61383 100366.7 -0.32397 -0.0001126 -0.097858 -3.401E-05 -0.42183 -0.00014661 347.545191767883 354.21733042409 46.531 0.71484 46.531 46.291 47.006 0 214 43 8 0 0 0 0.023647 2 21837 34.087 20.067 1 1.4709 1.3716 0 33887000 13811000 20077000 31515 303 11967 12296 49137;49138 49137 SISGSIPAGR 10 0 1 Unmodified _SISGSIPAGR_ 0 0 0 B4E223;Q68D10 B4E223 B4E223 SPTY2D1 Protein SPT2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 477.7656 2 472.761623 943.508694 89967.49 0.1221 5.7725E-05 -0.32575 -0.000154 -0.20365 -9.6276E-05 472.761773939946 477.765421664766 38.616 0.30161 38.616 38.447 38.748 0 53 19 4 0 0 0 0.043055 1 17545 37.549 19.513 1 2.3306 2.0564 0 1393800 433170 960650 31516 1071 11968 12297 49139 49139 SISISVAGGGGGFGAAGGFGGR 22 0 1 Unmodified _SISISVAGGGGGFGAAGGFGGR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 919.9655 2 919.960831 1837.90711 NaN NaN NaN 0.25671 0.00023616 NaN NaN NaN NaN 100.52 0.99235 100.52 100.08 101.07 0 0 0 0 0.00036694 1 61410 69.345 69.345 1 NaN NaN 0 36606000 36606000 0 + 31517 1166 11969 12298 49140 49140 SISISVAGGGGGFGAAGGFGGR 22 0 1 Unmodified _SISISVAGGGGGFGAAGGFGGR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.9598 2 919.960831 1837.90711 NaN NaN NaN 0.24882 0.0002289 NaN NaN NaN NaN 99.765 0.88515 99.765 99.466 100.35 0 0 0 0 4.2643E-06 1 62399 81.494 75.649 1 NaN NaN 0 35386000 35386000 0 + 31518 1166 11969 12298 49141 49141 SISISVAGGGGGFGAAGGFGGR 22 0 1 Unmodified _SISISVAGGGGGFGAAGGFGGR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 919.9608 2 919.960831 1837.90711 NaN NaN NaN 0.54187 0.0004985 NaN NaN NaN NaN 112.68 0.70945 112.68 112.43 113.14 0 0 0 0 0.0076219 1 64478 57.434 57.434 1 NaN NaN 0 35528000 35528000 0 + 31519 1166 11969 12298 49142 49142 SISLPSLDLVSAK 13 1 0 Unmodified _SISLPSLDLVSAK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.3855 2 665.384842 1328.75513 NaN NaN NaN -0.11513 -7.6607E-05 NaN NaN NaN NaN 114.71 0.36911 114.71 114.53 114.9 0 0 0 0 0.028507 1 72783 43.512 23.183 1 NaN NaN 0 4567100 4567100 0 + 31520 1146 11970 12299 49143 49143 SISLYYTGEK 10 1 0 Unmodified _SISLYYTGEK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.8027 2 580.795329 1159.5761 78855.26 0.5281 0.00030672 0.64755 0.00037609 1.1756 0.00068281 580.795735143804 584.802769370632 65.998 1.227 65.998 65.801 67.028 0 452 102 9 0 0 0 1.3473E-05 3 38022 102.62 44.662 1 1.1097 1.322 0 656470000 314130000 342340000 31521 151 11971 12300 49144;49145;49146 49145 SISLYYTGEK 10 1 0 Unmodified _SISLYYTGEK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.796 2 580.795329 1159.5761 79334.88 0.5776 0.00033547 0.5825 0.00033831 1.1601 0.00067378 580.795767169022 584.802789824771 64.783 1.3904 64.783 64.419 65.81 0 470 118 9 0 0 0 9.6112E-06 2 38110 105.52 46.54 1 1.1168 1.3172 0 762400000 355930000 406470000 31522 151 11971 12300 49147;49148 49147 SISLYYTGEK 10 1 0 Unmodified _SISLYYTGEK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.7971 2 580.795329 1159.5761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.059 1 76.059 75.559 76.559 0 0 0 0 0.051383 1 40547 44.203 15.985 1 31523 151 11971 12300 49149 49149 SISVDLAESK 10 1 0 Unmodified _SISVDLAESK_ 0 0 0 Q4G1A1;A8K3X3;Q9H410;Q5JW53;Q5JW54;Q5JW57 Q4G1A1 Q4G1A1 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.7798 2 524.779679 1047.5448 83996.13 0.2567 0.00013471 0.13192 6.9229E-05 0.38862 0.00020394 524.779745139805 528.786778743486 56.239 0.45665 56.239 55.996 56.453 0 110 34 4 0 0 0 0.0016591 1 32357 72.643 52.018 1 0.6861 0.69077 0 13474000 7027800 6446400 31524 727 11972 12301 49150 49150 SISVIDSPGILSGEK 15 1 0 Unmodified _SISVIDSPGILSGEK_ 0 0 0 A8K9B9;A0A024R9N6;Q9H223 A8K9B9 A8K9B9 EHD4 EH domain-containing protein 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.8783 2 751.409046 1500.80354 73033.13 1.0274 0.00077201 -0.76235 -0.00057284 0.26506 0.00019917 751.910337261154 755.415507578725 96.881 0.40034 96.881 96.718 97.118 0 97 32 4 0 0 0 0.04497 1 60478 38.402 25.826 1 1.4179 1.4821 0 10201000 5158400 5043000 31525 284 11973 12302 49151 49151 SISVIDSPGILSGEK 15 1 0 Unmodified _SISVIDSPGILSGEK_ 0 0 0 A8K9B9;A0A024R9N6;Q9H223 A8K9B9 A8K9B9 EHD4 EH domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 755.9189 2 751.409046 1500.80354 77434.45 0.67406 0.00050649 -0.63236 -0.00047516 0.041693 3.1328E-05 751.408422159529 755.415200641024 110.44 0.25671 110.44 110.27 110.53 0 35 14 5 0 0 0 0.038032 1 62849 24.291 9.601 1 2.0329 1.755 0 1375400 371310 1004100 31526 284 11973 12302 49152 49152 SITHDIEEK 9 1 0 Unmodified _SITHDIEEK_ 0 0 0 A0A0S2Z5W9;A0A024R8Q0;A0A0S2Z5A5;A0A024R8V0;Q9UHD8;K7EK18;K7EL40;K7EIR4;K7EKN4;K7EN52;K7ENQ5;K7EJZ2;K7ELJ9;K7ER52;K7EIE4;K7EQD7 A0A0S2Z5W9 A0A0S2Z5W9 SEPT9 Septin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.2766 2 536.269478 1070.5244 83510.09 0.8771 0.00047036 0.081364 4.3633E-05 0.95847 0.000514 536.269550219146 540.276538655188 22.786 0.31541 22.786 22.63 22.946 0 59 17 6 0 0 0 0.001764 1 8746 81.163 49.934 1 2.8125 2.7749 0 8488300 2587000 5901300 31527 254 11974 12303 49153 49153 SITILSTPEGTSAACK 16 1 0 Unmodified _SITILSTPEGTSAACK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.4254 2 818.416545 1634.81854 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.225 1 75.225 74.725 75.725 -7.6294E-06 0 0 0 4.7885E-05 1 45321 91.202 67.882 1 31528 1364 11975 12304 49154 49154 SITILSTPEGTSAACK 16 1 0 Unmodified _SITILSTPEGTSAACK_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 822.4268 2 818.416545 1634.81854 68436.8 0.67822 0.00055507 0.35003 0.00028647 1.0282 0.00084154 818.416520507249 822.424247212165 87.309 0.53189 87.309 87.086 87.618 0 85 29 6 0 0 0 0.032239 1 47101 24.071 24.071 1 0.82587 0.64714 0 3335700 1259500 2076200 31529 1364 11975 12304 49155 49155 SITVLVEGENTR 12 0 1 Unmodified _SITVLVEGENTR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;C9J8M6 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.3547 2 659.354074 1316.69359 75848.41 0.44095 0.00029074 -0.061137 -4.0311E-05 0.37982 0.00025043 659.354130397147 664.357866747515 70.043 0.56116 70.043 69.733 70.294 -7.6294E-06 221 52 6 0 0 0 4.6886E-08 1 40782 114.83 114.83 1 1.3354 1.4175 0 42217000 18494000 23723000 31530 560 11976 12305 49156 49156 SITVLVEGENTR 12 0 1 Unmodified _SITVLVEGENTR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;C9J8M6 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.355 2 659.354074 1316.69359 76264.66 0.53084 0.00035001 0.1605 0.00010583 0.69134 0.00045584 659.354136393316 664.358215104951 68.83 0.48558 68.83 68.557 69.042 0 180 42 6 0 0 0 7.8154E-13 2 40850 132.78 132.78 1 1.2118 1.4068 0 64324000 30391000 33933000 31531 560 11976 12305 49157;49158 49157 SITVLVEGENTR 12 0 1 Unmodified _SITVLVEGENTR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;C9J8M6 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.3543 2 659.354074 1316.69359 75157.92 0.47731 0.00031472 -0.44296 -0.00029207 0.034344 2.2645E-05 659.354025230048 664.357549557724 80.061 0.45347 80.061 79.793 80.247 -7.6294E-06 119 26 6 0 0 0 0.020586 1 43117 39.266 39.266 1 1.1165 0.94467 0 4944300 2288400 2655900 31532 560 11976 12305 49159 49159 SITVLVEGENTR 12 0 1 Unmodified _SITVLVEGENTR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;C9J8M6 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.3538 2 659.354074 1316.69359 73664.31 0.52072 0.00034334 -0.86674 -0.00057149 -0.34602 -0.00022815 659.353964937832 664.357443592554 80.259 0.50954 80.259 79.967 80.476 0 127 28 7 0 0 0 1.4704E-05 2 42515 105.86 105.86 1 1.0048 0.88814 0 3756400 1804700 1951700 31533 560 11976 12305 49160;49161 49161 SIVDYKPNLDLLEQQHQLIQEALIFDNK 28 2 0 Unmodified _SIVDYKPNLDLLEQQHQLIQEALIFDNK_ 0 0 1 A0A0S2Z3G9;O43707;Q96BG6;F5GXS2;H7C144;A0A0S2Z3X3;A0A0S2Z3C0 A0A0S2Z3G9 A0A0S2Z3G9 ACTN4 Alpha-actinin-4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.9497 4 831.942316 3323.74016 66768.52 0.98241 0.00081731 0.06834 5.6855E-05 1.0508 0.00087417 832.192513504509 836.200460211595 131.91 0.2738 131.91 131.77 132.05 0 71 19 7 0 0 0 0.033346 1 88295 11.785 11.785 1 1.6349 1.8629 0 10090000 4375100 5714400 31534 548 11977 12306 49162 49162 SIVGEIVR 8 0 1 Unmodified _SIVGEIVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.7679 2 436.763635 871.512717 90234.04 -0.197 -8.6042E-05 0.32916 0.00014376 0.13216 5.7723E-05 436.763644535101 441.76776423091 70.045 1.0211 70.045 69.522 70.543 0 439 90 7 0 0 0 0.036793 1 40616 48.561 18.376 1 0.92345 1.0725 0 177960000 92321000 85643000 31535 908 11978 12307 49163 49163 SIVGEIVR 8 0 1 Unmodified _SIVGEIVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.7676 2 436.763635 871.512717 91614.19 0.065427 2.8576E-05 0.16343 7.1381E-05 0.22886 9.9957E-05 436.763595400916 441.767760821767 68.636 1.0517 68.636 67.991 69.042 0 400 87 6 0 0 0 0.01739 2 40696 60.478 23.994 1 0.92449 1.0621 0 194420000 109840000 84575000 31536 908 11978 12307 49164;49165 49165 SIVGEIVR 8 0 1 Unmodified _SIVGEIVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 441.7677 2 436.763635 871.512717 90588.34 -0.2165 -9.4557E-05 0.26885 0.00011742 0.052356 2.2867E-05 436.763738335553 441.767802468486 79.941 1.0258 79.941 79.57 80.595 0 324 69 8 0 0 0 0.04634 2 43054 45.081 14.469 1 1.528 1.3041 0 37606000 14401000 23205000 31537 908 11978 12307 49166;49167 49166 SIVGEIVR 8 0 1 Unmodified _SIVGEIVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 441.7677 2 436.763635 871.512717 90557.42 -0.071818 -3.1367E-05 -0.032766 -1.4311E-05 -0.10458 -4.5678E-05 436.763614514398 441.767642858521 80.068 0.94928 80.068 79.661 80.61 7.6294E-06 309 57 8 0 0 0 0.04634 2 42261 45.081 13.131 1 1.4491 1.264 0 35305000 13837000 21468000 31538 908 11978 12307 49168;49169 49168 SIYNLNEDEELTHYGQSLADIEK 23 1 0 Unmodified _SIYNLNEDEELTHYGQSLADIEK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.4312 3 894.424083 2680.25042 64265.24 0.96112 0.00085965 0.056271 5.033E-05 1.0174 0.00090998 894.758175572515 897.430152550446 108.39 0.54932 108.39 108.14 108.69 0 340 41 10 0 0 0 3.1868E-09 3 67565 69.133 69.133 1 1.0696 1.2071 0 79161000 39931000 39230000 31539 790 11979 12308 49170;49171;49172 49171 SIYNLNEDEELTHYGQSLADIEK 23 1 0 Unmodified _SIYNLNEDEELTHYGQSLADIEK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.432 3 894.424083 2680.25042 64102.8 0.73031 0.00065321 0.098068 8.7715E-05 0.82838 0.00074092 894.758237975753 897.42991780298 107.81 0.6451 107.81 107.47 108.12 -7.6294E-06 367 47 10 0 0 0 3.3725E-17 4 68767 109.05 109.05 1 1.0153 1.1455 0 63780000 28454000 35326000 31540 790 11979 12308 49173;49174;49175;49176 49174 SIYNLNEDEELTHYGQSLADIEK 23 1 0 Unmodified _SIYNLNEDEELTHYGQSLADIEK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 894.7585 3 894.424083 2680.25042 63934.98 0.76731 0.0006863 0.38964 0.00034851 1.1569 0.0010348 894.758687521976 897.430204420206 119.3 0.61073 119.3 119 119.61 0 172 24 13 0 0 0 1.7946E-30 2 70569 133.95 133.95 1 1.4395 1.2293 0 65829000 26659000 39170000 31541 790 11979 12308 49177;49178 49178 SIYNLNEDEELTHYGQSLADIEK 23 1 0 Unmodified _SIYNLNEDEELTHYGQSLADIEK_ 0 0 0 A8KA74;P78316;E9PFK5 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 894.7587 3 894.424083 2680.25042 63926.54 0.36395 0.00032552 0.29208 0.00026124 0.65603 0.00058677 894.758722438839 897.430032257959 119.15 0.44588 119.15 118.91 119.36 0 130 17 13 0 0 0 4.1498E-23 2 69554 119.02 119.02 1 1.3353 1.1388 0 94764000 41787000 52977000 31542 790 11979 12308 49179;49180 49179 SIYSLILGQDNAADQSR 17 0 1 Unmodified _SIYSLILGQDNAADQSR_ 0 0 0 Q9P0I2 Q9P0I2 Q9P0I2 EMC3 ER membrane protein complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 930.9686 2 925.965779 1849.91701 63560.14 0.80337 0.00074389 -0.47604 -0.0004408 0.32733 0.00030309 925.965726029963 931.471275287923 110.47 0.31107 110.47 110.31 110.62 0 75 23 5 0 0 0 2.25E-09 4 71083 108.72 102.53 1 0.6419 0.63543 0 12316000 7702400 4613600 31543 2092 11980 12309 49181;49182;49183;49184 49182 SIYSLILGQDNAADQSR 17 0 1 Unmodified _SIYSLILGQDNAADQSR_ 0 0 0 Q9P0I2 Q9P0I2 Q9P0I2 EMC3 ER membrane protein complex subunit 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 930.9702 2 925.965779 1849.91701 NaN NaN NaN -2.6616 -0.0024646 NaN NaN NaN NaN 122.26 0.39502 122.26 122.14 122.53 0 0 0 0 0.040826 1 72926 34.331 27.89 1 NaN NaN 0 2170800 0 2170800 31544 2092 11980 12309 49185 49185 SIYSQIQEQR 10 0 1 Unmodified _SIYSQIQEQR_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.3251 2 626.320034 1250.62551 76777.57 0.86348 0.00054081 0.54703 0.00034262 1.4105 0.00088343 626.319929254889 631.324247203802 48.715 0.71544 48.715 48.366 49.081 -3.8147E-06 246 54 9 0 0 0 1.8312E-79 2 26622 234.47 199.18 1 0.84743 0.95549 0 99070000 52547000 46523000 31545 402 11981 12310 49186;49187 49187 SIYSQIQEQR 10 0 1 Unmodified _SIYSQIQEQR_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.3207 2 626.320034 1250.62551 80465.27 0.94036 0.00058897 0.27297 0.00017097 1.2133 0.00075993 626.320171726522 631.323639282025 47.409 0.45343 47.409 47.193 47.646 3.8147E-06 100 30 7 0 0 0 3.1671E-08 1 26407 125.82 95.651 1 0.77426 0.88217 0 133870000 51371000 82494000 31546 402 11981 12310 49188 49188 SIYSQIQEQR 10 0 1 Unmodified _SIYSQIQEQR_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.3241 2 626.320034 1250.62551 75744.96 0.59196 0.00037075 0.21051 0.00013185 0.80247 0.0005026 626.319933759711 631.324019751385 56.615 0.63026 56.615 56.338 56.968 0 222 39 9 0 0 0 4.7334E-08 2 28482 116.37 86.205 1 1.2565 1.0473 0 22675000 8987300 13688000 31547 402 11981 12310 49189;49190 49189 SIYSQIQEQR 10 0 1 Unmodified _SIYSQIQEQR_ 0 0 0 A0A087WT20;Q9NV06 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.3239 2 626.320034 1250.62551 76903.71 0.67632 0.00042359 0.1382 8.656E-05 0.81452 0.00051015 626.319860228733 631.323950466695 57.108 0.62423 57.108 56.847 57.471 0 215 40 9 0 0 0 3.1894E-12 3 28164 146.79 110.23 1 1.3866 1.1935 0 21999000 9968900 12030000 31548 402 11981 12310 49191;49192;49193 49192 SIYYITGESK 10 1 0 Unmodified _SIYYITGESK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF8 B4DMA2;Q58FF8 B4DMA2 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.7956 2 580.795329 1159.5761 79686.34 0.53391 0.00031009 0.47181 0.00027403 1.0057 0.00058412 580.795576565343 584.802567239095 57.839 1.3755 57.839 57.453 58.828 -3.8147E-06 537 111 8 0 0 0 0.00029628 3 32605 90.919 74.379 1 2.1212 2.4157 0 170810000 56887000 113920000 31549 379;1800 11982 12311 49194;49195;49196 49195 SIYYITGESK 10 1 0 Unmodified _SIYYITGESK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF8 B4DMA2;Q58FF8 B4DMA2 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8027 2 580.795329 1159.5761 79937.46 0.67531 0.00039222 0.28516 0.00016562 0.96047 0.00055784 580.795408840825 584.802446343868 56.841 1.3539 56.841 56.391 57.745 -3.8147E-06 566 103 9 0 0 0 1.4212E-05 2 32703 102.07 77.912 1 2.1213 2.4326 0 166630000 53839000 112790000 31550 379;1800 11982 12311 49197;49198 49198 SIYYITGESK 10 1 0 Unmodified _SIYYITGESK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF8 B4DMA2;Q58FF8 B4DMA2 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.7959 2 580.795329 1159.5761 79730.23 0.56445 0.00032783 0.37323 0.00021677 0.93768 0.0005446 580.795385002279 584.802540938717 67.026 1.5175 67.026 66.566 68.083 0 512 105 8 0 0 0 0.001179 2 34843 74.92 57.68 1 1.4581 1.1475 0 17391000 7207200 10184000 31551 379;1800 11982 12311 49199;49200 49200 SIYYITGESK 10 1 0 Unmodified _SIYYITGESK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF8 B4DMA2;Q58FF8 B4DMA2 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 580.7956 2 580.795329 1159.5761 80179.28 0.36317 0.00021093 0.47601 0.00027646 0.83918 0.00048739 580.795392806243 584.802595888871 67.496 1.5242 67.496 67.032 68.556 0 471 103 7 0 0 0 0.010142 1 34387 53.756 33.97 1 1.4181 1.1604 0 12582000 5262100 7319500 31552 379;1800 11982 12311 49201 49201 SKAEAESLYQSK 12 2 0 Unmodified _SKAEAESLYQSK_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.8392 2 670.838256 1339.66196 NaN NaN NaN 0.66304 0.00044479 NaN NaN NaN NaN 22.121 0.26155 22.121 21.971 22.233 1.9073E-06 0 0 0 2.9963E-58 1 8249 182.71 154.54 1 NaN NaN 0 7798500 7798500 0 + 31553 1308;1309 11983 12312 49202 49202 SKAEAESLYQSK 12 2 0 Unmodified _SKAEAESLYQSK_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8399 2 670.838256 1339.66196 NaN NaN NaN 1.7417 0.0011684 NaN NaN NaN NaN 21.8 0.25385 21.8 21.661 21.915 0 0 0 0 6.0855E-20 1 7838 142.97 116.08 1 NaN NaN 0 10294000 10294000 0 + 31554 1308;1309 11983 12312 49203 49203 SKGESDDFHMDFDSAVAPR 19 1 1 Oxidation (M) _SKGESDDFHM(ox)DFDSAVAPR_ SKGESDDFHM(1)DFDSAVAPR SKGESDDFHM(76.03)DFDSAVAPR 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.9833 3 709.640976 2125.9011 70954.31 0.57156 0.0004056 -0.62889 -0.00044629 -0.057334 -4.0687E-05 710.307143759198 715.648311654408 51.89 0.7527 51.89 51.578 52.33 0 341 59 8 0 0 0 2.0225E-06 2 29425 76.027 74.376 1 0.81154 0.94861 0 49948000 26826000 23122000 31555 1471 11984 12313 49204;49205 49205 1199 SKPNLPSESR 10 1 1 Unmodified _SKPNLPSESR_ 0 0 1 A8K644;Q08170;Q59EF5 A8K644 A8K644 SFRS4;SRSF4 Serine/arginine-rich splicing factor 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.796 2 557.796195 1113.57784 81038.99 0.048588 2.7102E-05 0.45447 0.0002535 0.50306 0.0002806 557.796408554996 566.807739014318 18.737 0.41552 18.737 18.539 18.955 1.9073E-06 84 26 4 0 0 0 0.029264 1 5606 60.167 50.773 1 0.79102 0.88102 0 20044000 10574000 9469900 31556 755 11985 12314 49206 49206 SKVEDPEINSIQDIK 15 2 0 Unmodified _SKVEDPEINSIQDIK_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.9601 2 857.946524 1713.87849 67378.34 0.89877 0.0007711 -0.31158 -0.00026732 0.58719 0.00050378 857.94653771301 865.960233071815 63.844 0.50689 63.844 63.584 64.091 -3.8147E-06 187 49 6 0 0 0 2.0839E-09 3 36575 115.24 115.24 1 1.0972 1.3099 0 18607000 7800200 10806000 31557 1741 11986 12315 49207;49208;49209 49208 SKVEDPEINSIQDIK 15 2 0 Unmodified _SKVEDPEINSIQDIK_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.3121 3 572.300108 1713.87849 80472.93 0.69323 0.00039674 -0.096429 -5.5186E-05 0.59681 0.00034155 572.299946263925 577.642729016552 63.894 0.91051 63.894 63.469 64.379 0 312 82 5 0 0 0 0.0029014 1 36608 26.075 26.075 1 1.0724 1.2713 0 27817000 14276000 13541000 31558 1741 11986 12315 49210 49210 SKVEDPEINSIQDIK 15 2 0 Unmodified _SKVEDPEINSIQDIK_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.9464 2 857.946524 1713.87849 68727.78 0.56168 0.00048189 -0.038553 -3.3076E-05 0.52313 0.00044882 857.946551188173 865.960783374561 62.038 0.49193 62.038 61.767 62.259 0 190 44 6 0 0 0 5.8315E-05 2 36304 104.24 104.24 1 1.0744 1.2303 0 19342000 9325900 10017000 31559 1741 11986 12315 49211;49212 49212 SKVEDPEINSIQDIK 15 2 0 Unmodified _SKVEDPEINSIQDIK_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 865.9608 2 857.946524 1713.87849 66242.13 0.55426 0.00047553 -0.10779 -9.2477E-05 0.44647 0.00038305 857.946214657591 865.960596188152 73.295 0.60088 73.295 73.033 73.634 0 221 43 7 0 0 0 0.00067798 1 38723 80.905 68.692 1 1.3444 1.1486 0 13623000 5774300 7849000 31560 1741 11986 12315 49213 49213 SKVEDPEINSIQDIK 15 2 0 Unmodified _SKVEDPEINSIQDIK_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.6431 3 572.300108 1713.87849 79017.6 0.50919 0.00029141 0.22669 0.00012974 0.73589 0.00042115 572.300259189575 577.642913647841 73.293 0.56907 73.293 73.052 73.621 0 236 39 7 0 0 0 0.012167 1 38759 19.292 19.292 1 1.3545 1.158 0 12021000 5749500 6271200 31561 1741 11986 12315 49214 49214 SKVEDPEINSIQDIK 15 2 0 Unmodified _SKVEDPEINSIQDIK_ 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 865.9615 2 857.946524 1713.87849 66225.46 0.43199 0.00037062 0.13267 0.00011382 0.56466 0.00048445 857.946369920738 865.960693538176 73.728 0.61374 73.728 73.476 74.09 0 200 42 7 0 0 0 0.013046 1 38138 44.968 44.968 1 1.3152 1.1114 0 11082000 4905900 6176100 31562 1741 11986 12315 49215 49215 SKVPVLDEGLTSVETYTPAIR 21 1 1 Unmodified _SKVPVLDEGLTSVETYTPAIR_ 0 0 1 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.0858 3 759.077519 2274.21073 69391.34 0.87554 0.00066461 -0.30971 -0.00023509 0.56584 0.00042951 759.412033342468 765.417816187054 120.72 0.52115 120.72 120.53 121.05 -7.6294E-06 118 24 9 0 0 0 5.7284E-07 1 70782 51.469 51.469 1 3.0421 2.5726 0 10223000 2596000 7626600 31563 1945 11987 12316 49216 49216 SKYEALQTFAR 11 1 1 Unmodified _SKYEALQTFAR_ 0 0 1 A0A024R804;A8WFP5;O60675;A0A024R8X1;O15525 A0A024R804;A0A024R8X1 A0A024R804 MAFK;hCG_1991559;MAFG Transcription factor MafK;Transcription factor MafG MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.3578 2 657.346052 1312.67755 72704.53 0.66337 0.00043606 -0.22556 -0.00014827 0.43781 0.00028779 657.345989666484 666.357339312436 57.985 0.70902 57.985 57.658 58.367 -3.8147E-06 237 55 6 0 0 0 0.0018327 1 29361 86.189 36.155 1 1.9717 1.7047 0 14365000 5062000 9303000 31564 239;262 11988 12317 49217 49217 SKYEALQTFAR 11 1 1 Unmodified _SKYEALQTFAR_ 0 0 1 A0A024R804;A8WFP5;O60675;A0A024R8X1;O15525 A0A024R804;A0A024R8X1 A0A024R804 MAFK;hCG_1991559;MAFG Transcription factor MafK;Transcription factor MafG MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.3577 2 657.346052 1312.67755 73796.57 0.55927 0.00036763 0.214 0.00014067 0.77327 0.0005083 657.346033725147 666.357428506972 58.213 0.76712 58.213 57.791 58.558 0 286 56 8 0 0 0 0.0013137 1 28800 90.913 36.847 1 1.8807 1.5877 0 9153500 3033100 6120400 31565 239;262 11988 12317 49218 49218 SLAAQEPASVLEEAR 15 0 1 Unmodified _SLAAQEPASVLEEAR_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.9122 2 785.907202 1569.79985 NaN NaN NaN 0.2308 0.00018138 NaN NaN NaN NaN 81.243 0.47294 81.243 81.039 81.512 0 0 0 0 2.0773E-10 1 48365 110.31 95.615 1 NaN NaN 0 10091000 0 10091000 31566 1103 11989 12318 49219 49219 SLAAQEPASVLEEAR 15 0 1 Unmodified _SLAAQEPASVLEEAR_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.4108 2 785.907202 1569.79985 NaN NaN NaN 0.087348 6.8647E-05 NaN NaN NaN NaN 80.226 0.47397 80.226 80.03 80.504 0 0 0 0 9.1703E-05 3 48759 79.82 65.13 1 NaN NaN 0 11980000 0 11980000 31567 1103 11989 12318 49220;49221;49222 49221 SLAAQEPASVLEEAR 15 0 1 Unmodified _SLAAQEPASVLEEAR_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.9118 2 785.907202 1569.79985 67670.02 0.63909 0.00050226 0.055343 4.3495E-05 0.69443 0.00054576 785.907017196444 790.911381570526 93.334 0.55795 93.334 93.07 93.628 0 183 33 7 0 0 0 0.00022032 2 52034 66.267 66.267 1 1.8446 1.5832 0 8262300 2771100 5491200 31568 1103 11989 12318 49223;49224 49223 SLAAQEPASVLEEAR 15 0 1 Unmodified _SLAAQEPASVLEEAR_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 790.9107 2 785.907202 1569.79985 67801.37 0.54199 0.00042595 0.021899 1.7211E-05 0.56389 0.00044316 785.907060653255 790.911321031261 93.246 0.66144 93.246 92.986 93.648 0 199 36 7 0 0 0 0.00022002 1 51095 63.76 54.572 1 1.6528 1.374 0 6012800 2307600 3705200 31569 1103 11989 12318 49225 49225 SLAGSSGPGASSGTSGDHGELVVR 24 0 1 Unmodified _SLAGSSGPGASSGTSGDHGELVVR_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;A0A087X1X7;Q71RH4;Q9H7G6;E9PQ49;E9PI39;E9PMW7;E9PIZ1;E9PPR1;E9PL12;H0YCK7 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.0213 3 729.020844 2184.0407 70990.85 0.80912 0.00058987 -0.25527 -0.0001861 0.55385 0.00040377 729.354352525578 732.69115207102 46.613 0.46467 46.613 46.353 46.817 0 197 39 7 0 0 0 3.4395E-16 2 25152 92.426 78.319 1 2.1251 2.174 0 33142000 12421000 20721000 31570 875 11990 12319 49226;49227 49227 SLAGSSGPGASSGTSGDHGELVVR 24 0 1 Unmodified _SLAGSSGPGASSGTSGDHGELVVR_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;A0A087X1X7;Q71RH4;Q9H7G6;E9PQ49;E9PI39;E9PMW7;E9PIZ1;E9PPR1;E9PL12;H0YCK7 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.3579 3 729.020844 2184.0407 70620.97 0.65135 0.00047485 0.067031 4.8867E-05 0.71838 0.00052371 729.020907667107 732.357150799337 45.269 0.47192 45.269 45.062 45.534 0 205 40 7 0 0 0 2.0432E-27 2 24855 112.85 105.32 1 2.0681 2.2937 0 42701000 14043000 28658000 31571 875 11990 12319 49228;49229 49229 SLAGSSGPGASSGTSGDHGELVVR 24 0 1 Unmodified _SLAGSSGPGASSGTSGDHGELVVR_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;A0A087X1X7;Q71RH4;Q9H7G6;E9PQ49;E9PI39;E9PMW7;E9PIZ1;E9PPR1;E9PL12;H0YCK7 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.3549 3 729.020844 2184.0407 71228.16 0.72585 0.00052916 -0.32522 -0.00023709 0.40063 0.00029207 729.020742072139 732.691323062982 54.182 0.39425 54.182 54.003 54.397 3.8147E-06 206 32 8 0 0 0 7.4126E-06 1 26955 39.893 36.166 1 1.1375 0.96326 0 4998500 2035000 2963500 31572 875 11990 12319 49230 49230 SLAGSSGPGASSGTSGDHGELVVR 24 0 1 Unmodified _SLAGSSGPGASSGTSGDHGELVVR_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;E9PK01;A0A087X1X7;Q71RH4;Q9H7G6;E9PQ49;E9PI39;E9PMW7;E9PIZ1;E9PPR1;E9PL12;H0YCK7 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.6893 3 729.020844 2184.0407 71832.16 0.50305 0.00036674 -0.17189 -0.00012531 0.33117 0.00024143 729.354432900288 732.356924996683 54.64 0.44201 54.64 54.43 54.872 -3.8147E-06 202 33 8 0 0 0 7.5244E-05 2 26686 36.256 32.858 1 1.1405 1.0083 0 3892700 1652200 2240500 31573 875 11990 12319 49231;49232 49232 SLALIFNSLQGQLHPTPDLK 20 1 0 Unmodified _SLALIFNSLQGQLHPTPDLK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.4137 3 731.407311 2191.2001 70999.27 0.81537 0.00059637 -0.13442 -9.8318E-05 0.68095 0.00049805 731.74161386488 734.412995299833 119.73 0.70379 119.73 119.47 120.17 7.6294E-06 254 47 7 0 0 0 7.9296E-08 1 77078 85.146 80.878 1 0.69915 0.69014 0 25190000 14486000 10704000 31574 1421 11991 12320 49233 49233 SLALIFNSLQGQLHPTPDLK 20 1 0 Unmodified _SLALIFNSLQGQLHPTPDLK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1097.1097 2 1096.60733 2191.2001 60066.63 0.31086 0.00034089 0.15608 0.00017115 0.46694 0.00051205 1097.10924117835 1100.614087101 119.77 0.41634 119.77 119.54 119.96 7.6294E-06 119 26 6 0 0 0 0.0048206 1 77156 40.552 40.552 1 0.73609 0.72339 0 8985600 6057700 2927900 31575 1421 11991 12320 49234 49234 SLALIFNSLQGQLHPTPDLK 20 1 0 Unmodified _SLALIFNSLQGQLHPTPDLK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.0797 3 731.407311 2191.2001 71145.91 0.77746 0.00056864 0.020451 1.4958E-05 0.79791 0.00058359 731.741623404639 734.078749832119 119.1 0.76419 119.1 118.84 119.6 0 222 52 7 0 0 0 2.6139E-33 2 78336 150.45 150.45 1 0.75849 0.83205 0 41165000 20980000 20185000 31576 1421 11991 12320 49235;49236 49236 SLALIFNSLQGQLHPTPDLK 20 1 0 Unmodified _SLALIFNSLQGQLHPTPDLK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1097.1099 2 1096.60733 2191.2001 59621.11 0.18876 0.000207 0.54311 0.00059557 0.73187 0.00080257 1097.10960445599 1101.61809980799 119.06 0.42127 119.06 118.91 119.33 0 133 28 7 0 0 0 0.0048206 1 78435 40.552 40.552 1 0.67981 0.68027 0 15522000 8774200 6747400 31577 1421 11991 12320 49237 49237 SLALIFNSLQGQLHPTPDLK 20 1 0 Unmodified _SLALIFNSLQGQLHPTPDLK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 734.414 3 731.407311 2191.2001 71338.24 0.91723 0.00067087 -0.41216 -0.00030145 0.50508 0.00036942 731.741430196415 734.412880526616 131.93 0.89328 131.93 131.7 132.59 0 196 41 7 0 0 0 2.8139E-09 1 80075 88.264 88.264 1 1.2146 0.94318 0 14710000 5847700 8862100 31578 1421 11991 12320 49238 49238 SLALIFNSLQGQLHPTPDLK 20 1 0 Unmodified _SLALIFNSLQGQLHPTPDLK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.0782 3 731.407311 2191.2001 71195.14 1.0683 0.00078137 0.5418 0.00039628 1.6101 0.0011776 731.742127945069 734.413353274725 131.61 0.77496 131.61 131.45 132.23 0 116 31 6 0 0 0 3.0213E-18 1 79003 120.31 120.31 1 1.3892 1.1139 0 19202000 7581000 11621000 31579 1421 11991 12320 49239 49239 SLALSVAVNVAPGR 14 0 1 Unmodified _SLALSVAVNVAPGR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.4003 2 677.396076 1352.7776 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.481 1 97.481 96.981 97.981 0 0 0 0 0.00045568 1 59469 83 57.614 1 31580 1205 11992 12321 49240 49240 SLAMSVTTSGFSEFTPQSILR 21 0 1 Oxidation (M) _SLAM(ox)SVTTSGFSEFTPQSILR_ SLAM(1)SVTTSGFSEFTPQSILR SLAM(56.48)SVTTSGFSEFTPQSILR 0 1 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1138.5698 2 1138.06738 2274.1202 56999.45 0.38346 0.0004364 0.46608 0.00053043 0.84954 0.00096683 1138.56903159301 1143.57244909719 120.73 0.48456 120.73 120.44 120.93 7.6294E-06 171 34 8 0 0 0 3.5535E-07 2 77821 56.482 56.482 1 1.7758 1.8662 0 11569000 3689400 7880100 31581 1945 11993 12322 49241;49242 49241 1792 SLANDFSTNSTK 12 1 0 Unmodified _SLANDFSTNSTK_ 0 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.814 2 642.806956 1283.59936 75957.96 0.66462 0.00042722 0.050309 3.2339E-05 0.71493 0.00045956 642.806896745768 646.814094944365 42.364 0.47766 42.364 42.14 42.617 0 133 33 6 0 0 0 9.2076E-18 3 22492 140.78 133.3 1 0.69177 0.74689 0 42096000 23851000 18245000 31582 1681 11994 12323 49243;49244;49245 49244 SLANDFSTNSTK 12 1 0 Unmodified _SLANDFSTNSTK_ 0 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.8132 2 642.806956 1283.59936 75946.8 0.92797 0.00059651 0.056572 3.6365E-05 0.98455 0.00063287 642.806929533426 646.814072200684 41.475 0.62738 41.475 41.155 41.782 0 167 53 4 0 0 0 0.0001724 4 22122 91.549 91.549 1 0.70418 0.71418 0 16620000 9609100 7010700 31583 1681 11994 12323 49246;49247;49248;49249 49246 SLANDFSTNSTK 12 1 0 Unmodified _SLANDFSTNSTK_ 0 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.8069 2 642.806956 1283.59936 NaN NaN NaN 0.22817 0.00014667 NaN NaN NaN NaN 49.009 0.72645 49.009 48.733 49.459 0 0 0 0 0.050843 1 23870 41.704 21.918 1 NaN NaN 0 1722800 1722800 0 31584 1681 11994 12323 49250 49250 SLANDFSTNSTK 12 1 0 Unmodified _SLANDFSTNSTK_ 0 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.8138 2 642.806956 1283.59936 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.836 1 48.836 48.336 49.336 0 0 0 0 0.026073 1 23830 48.004 28.217 1 31585 1681 11994 12323 49251 49251 SLANDFSTNSTK 12 1 0 Unmodified _SLANDFSTNSTK_ 0 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.8068 2 642.806956 1283.59936 NaN NaN NaN 0.33235 0.00021364 NaN NaN NaN NaN 49.39 0.78726 49.39 49.032 49.82 0 0 0 0 0.013323 1 23453 53.683 30.254 1 NaN NaN 0 2251200 2251200 0 31586 1681 11994 12323 49252 49252 SLANDFSTNSTK 12 1 0 Unmodified _SLANDFSTNSTK_ 0 0 0 Q03188 Q03188 Q03188 CENPC Centromere protein C MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.8141 2 642.806956 1283.59936 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.292 1 49.292 48.792 49.792 0 0 0 0 0.016199 1 23510 53.569 30.829 1 31587 1681 11994 12323 49253 49253 SLAPAGIADAPLSPLLTCIPNK 22 1 0 Unmodified _SLAPAGIADAPLSPLLTCIPNK_ 0 0 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1114.1157 2 1110.10885 2218.20314 60334.43 0.58577 0.00065027 0.074399 8.2591E-05 0.66017 0.00073286 1110.61094823725 1114.61741574482 126.62 0.34631 126.62 126.44 126.78 0 111 25 7 0 0 0 4.067E-07 2 82425 56.482 56.482 1 0.62889 0.62214 0 9437100 5860200 3576900 31588 1970 11995 12324 49254;49255 49255 SLAPAGIADAPLSPLLTCIPNK 22 1 0 Unmodified _SLAPAGIADAPLSPLLTCIPNK_ 0 0 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1114.616 2 1110.10885 2218.20314 59832.15 0.31857 0.00035365 0.079259 8.7986E-05 0.39783 0.00044163 1110.61072495397 1114.61722978099 126.26 0.3707 126.26 126.06 126.43 0 109 22 7 0 0 0 5.7002E-05 2 84180 40.278 40.278 1 0.63856 0.64972 0 9186000 5397100 3788900 31589 1970 11995 12324 49256;49257 49257 SLASIVQFYYMWK 13 1 0 Oxidation (M) _SLASIVQFYYM(ox)WK_ SLASIVQFYYM(1)WK SLASIVQFYYM(111.61)WK 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.4205 2 826.413077 1650.8116 68851.23 1.003 0.00082887 0.14175 0.00011714 1.1447 0.00094601 826.413496284758 830.420228848209 127.18 0.54141 127.18 126.89 127.44 0 112 33 6 0 0 0 4.1976E-07 1 84782 111.61 111.61 1 0.71228 0.75718 0 4065800 1998000 2067800 31590 168 11996 12325 49258 49258 145 SLATTRPTVNADDLLK 16 1 1 Unmodified _SLATTRPTVNADDLLK_ 0 0 1 A0A024R705;Q9UN37;Q9NXK5;Q9UF30;Q49AN7 A0A024R705 A0A024R705 VPS4A;DKFZp434E0418 Vacuolar protein sorting-associated protein 4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.324 3 572.315981 1713.92611 79722.95 0.51486 0.00029466 0.043349 2.4809E-05 0.55821 0.00031947 572.315934068808 578.323688071393 78.035 0.4254 78.035 77.738 78.163 0 119 33 5 0 0 0 0.0013149 1 46031 39.143 27.12 1 2.0036 2.1695 0 15080000 4443800 10636000 31591 213 11997 12326 49259 49259 SLATTRPTVNADDLLK 16 1 1 Unmodified _SLATTRPTVNADDLLK_ 0 0 1 A0A024R705;Q9UN37;Q9NXK5;Q9UF30;Q49AN7 A0A024R705 A0A024R705 VPS4A;DKFZp434E0418 Vacuolar protein sorting-associated protein 4A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 572.2737 3 572.315981 1713.92611 81974.59 0.40282 0.00023054 0.28182 0.00016129 0.68464 0.00039183 572.315994040052 578.324000183104 76.677 0.49733 76.677 76.421 76.918 0 132 37 7 0 0 0 0.045208 1 46365 28.956 11.156 1 2.1045 2.3892 0 17717000 7135000 10582000 31592 213 11997 12326 49260 49260 SLAVPTIEELEDEEER 16 0 1 Unmodified _SLAVPTIEELEDEEER_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 935.4553 2 929.94946 1857.88437 62668.3 0.96598 0.00089831 -0.51028 -0.00047454 0.45569 0.00042377 929.949093852477 934.953908094527 111.36 0.50056 111.36 111.1 111.6 7.6294E-06 202 35 8 0 0 0 3.6394E-06 2 70019 88.552 70.285 1 0.92886 0.95235 0 36065000 18464000 17601000 31593 2008 11998 12327 49261;49262 49262 SLAVPTIEELEDEEER 16 0 1 Unmodified _SLAVPTIEELEDEEER_ 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 935.455 2 929.94946 1857.88437 62968.53 0.53176 0.00049451 -0.79427 -0.00073863 -0.26251 -0.00024412 929.948737367347 934.953235640107 110.86 0.56325 110.86 110.59 111.16 0 230 41 8 0 0 0 1.1923E-05 2 71356 86.772 74.834 1 0.91835 1.0029 0 38583000 20929000 17654000 31594 2008 11998 12327 49263;49264 49264 SLAVPTIEELEDEEERNHR 19 0 2 Unmodified _SLAVPTIEELEDEEERNHR_ 0 0 1 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.37 3 756.036382 2265.08732 68999.02 0.84496 0.00063882 -0.17003 -0.00012855 0.67493 0.00051028 756.370099354996 763.042872386226 93.845 0.4731 93.845 93.598 94.071 0 78 43 4 0 0 0 0.0041387 1 56945 25.508 25.508 1 0.76902 0.83375 0 26080000 14474000 11607000 31595 2008 11999 12328 49265 49265 SLAVPTIEELEDEEERNHR 19 0 2 Unmodified _SLAVPTIEELEDEEERNHR_ 0 0 1 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.2979 4 567.279106 2265.08732 82265.5 0.88212 0.00050041 -0.034874 -1.9783E-05 0.84724 0.00048062 567.52957246239 572.53453532028 93.867 0.62791 93.867 93.467 94.095 0 152 56 6 0 0 0 0.013665 1 56974 21.773 21.773 1 0.83329 0.9004 0 19846000 9260800 10585000 31596 2008 11999 12328 49266 49266 SLAVPTIEELEDEEERNHR 19 0 2 Unmodified _SLAVPTIEELEDEEERNHR_ 0 0 1 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.5309 4 567.279106 2265.08732 79074.81 0.63596 0.00036077 0.12085 6.8553E-05 0.75681 0.00042932 567.529861403217 572.533984090343 106.67 0.6956 106.67 106.32 107.02 0 220 43 9 0 0 0 0.01981 1 60933 28.472 28.472 1 1.4604 1.2375 0 8821500 3438300 5383200 31597 2008 11999 12328 49267 49267 SLAVPTIEELEDEEERNHR 19 0 2 Unmodified _SLAVPTIEELEDEEERNHR_ 0 0 1 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.0494 3 756.036382 2265.08732 69171.36 0.73287 0.00055408 -0.28684 -0.00021686 0.44603 0.00033722 756.036122027491 762.708443605295 106.62 0.67198 106.62 106.36 107.03 0 196 42 6 0 0 0 0.024442 2 60935 15.254 15.254 1 1.5255 1.2625 0 21868000 8245400 13622000 31598 2008 11999 12328 49268;49269 49268 SLAVPTIEELEDEEERNHR 19 0 2 Unmodified _SLAVPTIEELEDEEERNHR_ 0 0 1 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.5299 4 567.279106 2265.08732 79815.65 0.55971 0.00031751 -0.38346 -0.00021753 0.17625 9.9986E-05 567.529973660452 572.282402116276 106.52 0.61106 106.52 106.22 106.83 0 169 39 6 0 0 0 0.020313 1 59991 25.198 25.198 1 1.5233 1.3931 0 9553400 3654400 5899000 31599 2008 11999 12328 49270 49270 SLAVSGLGVIGR 12 0 1 Unmodified _SLAVSGLGVIGR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.8452 2 564.840405 1127.66626 80844.08 0.7863 0.00044413 -0.18174 -0.00010265 0.60456 0.00034148 564.840232848481 569.844457460577 93.361 0.35438 93.361 93.112 93.467 -7.6294E-06 137 28 6 0 0 0 0.00017181 2 56529 91.584 75.922 1 0.63671 0.72303 0 109960000 66353000 43607000 31600 1679 12000 12329 49271;49272 49272 SLAVSGLGVIGR 12 0 1 Unmodified _SLAVSGLGVIGR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8419 2 564.840405 1127.66626 80887.22 0.69106 0.00039034 0.14991 8.4677E-05 0.84098 0.00047502 564.840428943518 569.844653626178 92.58 0.8488 92.58 92.247 93.096 0 371 70 7 0 0 0 0.00020601 1 57223 79.974 64.312 1 0.56179 0.64297 0 163670000 108040000 55633000 31601 1679 12000 12329 49273 49273 SLAVSGLGVIGR 12 0 1 Unmodified _SLAVSGLGVIGR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.8447 2 564.840405 1127.66626 80771.5 0.69127 0.00039046 -0.037526 -2.1196E-05 0.65375 0.00036926 564.840233979726 569.844522061738 106.87 0.79784 106.87 106.48 107.28 7.6294E-06 265 50 7 0 0 0 0.0075566 3 60934 48.44 32.778 1 1.0696 0.88659 0 20328000 9922300 10405000 31602 1679 12000 12329 49274;49275;49276 49274 SLAVSGLGVIGR 12 0 1 Unmodified _SLAVSGLGVIGR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.84 2 564.840405 1127.66626 80869.18 0.58347 0.00032957 0.24433 0.00013801 0.8278 0.00046757 564.840396020432 569.844666569759 106.68 0.94231 106.68 106.2 107.15 0 305 58 8 0 0 0 0.0017293 1 59976 60.398 43.158 1 1.0466 0.89002 0 19294000 9344800 9949100 31603 1679 12000 12329 49277 49277 SLAYLTAATHGLDEEAESLK 20 1 0 Unmodified _SLAYLTAATHGLDEEAESLK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.0301 3 707.023303 2118.04808 70896.63 0.79397 0.00056136 0.89964 0.00063607 1.6936 0.0011974 707.358357560652 710.029803287622 105.17 0.43733 105.17 104.93 105.36 0 100 35 4 0 0 0 7.4067E-07 2 66731 59.512 59.512 1 1.1237 1.1349 0 13217000 5780600 7436500 31604 1607 12001 12330 49278;49279 49278 SLAYLTAATHGLDEEAESLK 20 1 0 Unmodified _SLAYLTAATHGLDEEAESLK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1064.5452 2 1060.03132 2118.04808 NaN NaN NaN 0.016253 1.7229E-05 NaN NaN NaN NaN 105.15 0.5123 105.15 104.85 105.36 0 0 0 0 0.0015535 1 66708 42.568 32.38 1 NaN NaN 0 9062200 0 9062200 31605 1607 12001 12330 49280 49280 SLAYLTAATHGLDEEAESLK 20 1 0 Unmodified _SLAYLTAATHGLDEEAESLK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.6949 3 707.023303 2118.04808 71479.52 0.54659 0.00038645 -0.71216 -0.00050351 -0.16557 -0.00011706 707.356295488168 710.028629186894 117.1 0.31085 117.1 116.92 117.23 0 47 12 7 0 0 0 4.4872E-05 3 68869 29.444 29.444 1 0.69621 0.5442 0 3825100 2580900 1244200 31606 1607 12001 12330 49281;49282;49283 49282 SLAYLTAATHGLDEEAESLK 20 1 0 Unmodified _SLAYLTAATHGLDEEAESLK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1064.5391 2 1060.03132 2118.04808 62647.02 0.042413 4.4959E-05 0.4379 0.00046418 0.48031 0.00050914 1061.03449756112 1064.53987051337 117.11 0.24554 117.11 116.96 117.2 0 25 9 6 0 0 0 0.031477 1 68932 22.214 22.214 1 0.91999 0.73511 0 2911400 1692800 1218600 31607 1607 12001 12330 49284 49284 SLCIGATYDVTDSR 14 0 1 Unmodified _SLCIGATYDVTDSR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.3685 2 779.364312 1556.71407 68754.83 0.59096 0.00046057 -0.2279 -0.00017762 0.36306 0.00028295 779.364353242725 784.368381880952 89.857 0.68154 89.857 89.53 90.212 7.6294E-06 292 46 9 0 0 0 2.6687E-05 2 49657 96.64 92.467 1 1.1549 0.97296 0 28074000 12758000 15316000 31608 886 12002 12331 49285;49286 49286 SLCIGATYDVTDSR 14 0 1 Unmodified _SLCIGATYDVTDSR_ 0 0 0 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 779.3641 2 779.364312 1556.71407 67958.98 0.41054 0.00031996 -0.16689 -0.00013007 0.24365 0.00018989 779.364384283716 784.368392986677 89.834 0.67329 89.834 89.558 90.231 7.6294E-06 281 44 9 0 0 0 2.6687E-05 2 48819 96.64 96.64 1 1.113 0.96825 0 24670000 11347000 13323000 31609 886 12002 12331 49287;49288 49288 SLCNLEESITSAGR 14 0 1 Unmodified _SLCNLEESITSAGR_ 0 0 0 Q52LJ0 Q52LJ0 Q52LJ0 FAM98B Protein FAM98B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.8687 2 768.869762 1535.72497 71922.78 0.71436 0.00054925 -0.77016 -0.00059215 -0.055798 -4.2901E-05 768.868859651177 773.873796915975 85.875 0.45238 85.875 85.638 86.09 0 110 39 4 0 0 0 0.00023028 1 51678 65.03 65.03 1 0.93678 0.9612 0 14355000 8294400 6061000 31610 1782 12003 12332 49289 49289 SLCNLEESITSAGR 14 0 1 Unmodified _SLCNLEESITSAGR_ 0 0 0 Q52LJ0 Q52LJ0 Q52LJ0 FAM98B Protein FAM98B MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 768.8677 2 768.869762 1535.72497 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.972 1 98.972 98.472 99.472 0 0 0 0 0.026613 1 55074 43.604 32.853 1 31611 1782 12003 12332 49290 49290 SLDDDLDGVPLDATEDSK 18 1 0 Unmodified _SLDDDLDGVPLDATEDSK_ 0 0 0 O15042;E7ET15;H7C4V2 O15042 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.9415 2 952.934007 1903.85346 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.625 1 95.625 95.125 96.125 0 0 0 0 0.031272 1 59555 40.066 32.2 1 31612 1374 12004 12333 49291 49291 SLDEQANQENDALHK 15 1 0 Unmodified _SLDEQANQENDALHK_ 0 0 0 A4D1E9 A4D1E9 A4D1E9 GTPBP10 GTP-binding protein 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 860.4047 2 856.397729 1710.78091 NaN NaN NaN 0.1885 0.00016143 NaN NaN NaN NaN 25.403 0.1374 25.403 25.296 25.433 0 0 0 0 0.0089439 1 10997 51.998 45.339 1 NaN NaN 0 2055500 0 2055500 31613 663 12005 12334 49292 49292 SLDEQANQENDALHK 15 1 0 Unmodified _SLDEQANQENDALHK_ 0 0 0 A4D1E9 A4D1E9 A4D1E9 GTPBP10 GTP-binding protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.4053 2 856.397729 1710.78091 68362.55 0.92268 0.00079018 0.43205 0.00037001 1.3547 0.0011602 856.397265355351 861.409594011932 25.178 0.18946 25.178 25.062 25.251 0 22 6 6 0 0 0 4.1826E-05 2 10805 85.958 82.534 1 0.71771 0.72486 0 8353200 4292800 4060400 31614 663 12005 12334 49293;49294 49293 SLDFGFTIK 9 1 0 Unmodified _SLDFGFTIK_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;H0YE95;H0YDG6 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.2767 2 514.276575 1026.5386 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.43 1 105.43 104.93 105.93 0 0 0 0 0.040246 1 66960 49.715 14.907 1 31615 640 12006 12335 49295 49295 SLDHQGINFK 10 1 0 Unmodified _SLDHQGINFK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.7996 2 579.798737 1157.58292 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.939 1 36.939 36.439 37.439 0 0 0 0 0.0078827 1 19101 60.298 4.0883 1 31616 1990 12007 12336 49296 49296 SLDIFIK 7 1 0 Unmodified _SLDIFIK_ 0 0 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.2565 2 418.249829 834.485105 94667.71 0.42422 0.00017743 -0.077021 -3.2214E-05 0.3472 0.00014521 418.249732470886 422.256816638719 92.126 1.0097 92.126 91.579 92.588 0 336 93 5 0 0 0 0.041494 1 55628 58.981 17.479 1 1.0307 1.1096 0 40663000 20843000 19820000 31617 897 12008 12337 49297 49297 SLDIFIK 7 1 0 Unmodified _SLDIFIK_ 0 0 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.2572 2 418.249829 834.485105 93774.41 0.47105 0.00019702 0.14128 5.9091E-05 0.61233 0.00025611 418.24975180927 422.256934549781 90.903 1.146 90.903 90.407 91.553 0 343 96 5 0 0 0 0.027742 2 56071 73.039 20.356 1 0.97758 1.1021 0 67488000 29549000 37939000 31618 897 12008 12337 49298;49299 49298 SLDIQVPNFPADETK 15 1 0 Unmodified _SLDIQVPNFPADETK_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A0U1RRC8;A0A0U1RQX5 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.4343 2 837.422684 1672.83082 NaN NaN NaN 0.13921 0.00011658 NaN NaN NaN NaN 106.92 0.51091 106.92 106.7 107.21 0 0 0 0 4.9158E-05 1 66415 83.045 68.366 1 NaN NaN 0 11834000 0 11834000 31619 1575 12009 12338 49300 49300 SLDIQVPNFPADETK 15 1 0 Unmodified _SLDIQVPNFPADETK_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1;A0A0U1RRC8;A0A0U1RQX5 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 841.4313 2 837.422684 1672.83082 NaN NaN NaN 0.25159 0.00021069 NaN NaN NaN NaN 106.4 0.43228 106.4 106.19 106.63 0 0 0 0 0.00013708 1 67605 78.903 66.326 1 NaN NaN 0 12315000 0 12315000 31620 1575 12009 12338 49301 49301 SLDLDGIIAEVK 12 1 0 Unmodified _SLDLDGIIAEVK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.8572 2 636.855918 1271.69728 76405.98 1.2227 0.00077868 -0.49373 -0.00031444 0.72896 0.00046424 636.855599700091 640.862614025481 118.39 0.90782 118.39 118.04 118.95 0 325 53 10 0 0 0 2.1874E-05 2 75772 102.52 71.102 1 0.95953 1.0934 0 172830000 87857000 84973000 + 31621 1171;1158 12010 12339 49302;49303 49302 SLDLDGIIAEVK 12 1 0 Unmodified _SLDLDGIIAEVK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8567 2 636.855918 1271.69728 76475.48 0.82213 0.00052358 0.0030506 1.9428E-06 0.82518 0.00052552 636.855910036046 640.862954441998 117.91 0.99172 117.91 117.47 118.46 0 342 57 9 0 0 0 1.3299E-12 2 77280 129.16 90.134 1 0.96239 1.1161 0 218220000 114430000 103790000 + 31622 1171;1158 12010 12339 49304;49305 49304 SLDLDGIIAEVK 12 1 0 Unmodified _SLDLDGIIAEVK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.8615 2 636.855918 1271.69728 75556.94 0.60104 0.00038277 0.19159 0.00012201 0.79263 0.00050479 636.856150656542 640.86290016609 130.66 0.80402 130.66 130.45 131.26 0 232 37 10 0 0 0 0.00069674 2 79136 67.153 40.639 1 1.0582 0.85772 0 24977000 11509000 13467000 + 31623 1171;1158 12010 12339 49306;49307 49307 SLDLDGIIAEVK 12 1 0 Unmodified _SLDLDGIIAEVK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.3578 2 636.855918 1271.69728 76648.35 0.98028 0.0006243 -0.041365 -2.6344E-05 0.93892 0.00059796 636.855926334743 640.862807080792 130.51 0.88913 130.51 130.27 131.16 0 175 38 8 0 0 0 0.00019869 2 78074 78.488 44.463 1 0.81845 0.66717 0 25781000 12310000 13471000 + 31624 1171;1158 12010 12339 49308;49309 49308 SLDLDSIIAEVK 12 1 0 Unmodified _SLDLDSIIAEVK_ 0 0 0 CON__Q8BGZ7;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9 CON__Q8BGZ7;H6VRG3 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8616 2 651.8612 1301.70785 NaN NaN NaN -0.28217 -0.00018394 NaN NaN NaN NaN 122.63 1.6453 122.63 122.28 123.92 0 0 0 0 6.8182E-37 2 79212 158.79 127.42 1 NaN NaN 0 1078700000 1078700000 0 + 31625 1308;1180 12011 12340 49310;49311 49310 SLDLDSIIAEVK 12 1 0 Unmodified _SLDLDSIIAEVK_ 0 0 0 CON__Q8BGZ7;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9 CON__Q8BGZ7;H6VRG3 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8625 2 651.8612 1301.70785 NaN NaN NaN -0.28936 -0.00018862 NaN NaN NaN NaN 126.32 0.55259 126.32 126.06 126.62 7.6294E-06 0 0 0 0.0018756 1 82104 73.067 52.165 1 NaN NaN 0 3863200 3863200 0 + 31626 1308;1180 12011 12340 49312 49312 SLDLDSIIAEVK 12 1 0 Unmodified _SLDLDSIIAEVK_ 0 0 0 CON__Q8BGZ7;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9 CON__Q8BGZ7;H6VRG3 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8618 2 651.8612 1301.70785 NaN NaN NaN -0.10683 -6.964E-05 NaN NaN NaN NaN 144.06 0.32025 144.06 144.03 144.35 0 0 0 0 0.043104 1 91070 42.743 29.706 1 NaN NaN 0 670380 670380 0 + 31627 1308;1180 12011 12340 49313 49313 SLDLDSIIAEVK 12 1 0 Unmodified _SLDLDSIIAEVK_ 0 0 0 CON__Q8BGZ7;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9 CON__Q8BGZ7;H6VRG3 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.0051 2 651.8612 1301.70785 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.98 1 132.98 132.48 133.48 0 0 0 0 0.0062561 1 86962 62.303 32.493 1 + 31628 1308;1180 12011 12340 49314 49314 SLDLDSIIAEVK 12 1 0 Unmodified _SLDLDSIIAEVK_ 0 0 0 CON__Q8BGZ7;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9 CON__Q8BGZ7;H6VRG3 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8613 2 651.8612 1301.70785 NaN NaN NaN -0.32818 -0.00021393 NaN NaN NaN NaN 122.22 1.4389 122.22 121.82 123.26 0 0 0 0 1.6892E-37 2 80806 166.34 134.88 1 NaN NaN 0 1077400000 1077400000 0 + 31629 1308;1180 12011 12340 49315;49316 49315 SLDLDSIIAEVK 12 1 0 Unmodified _SLDLDSIIAEVK_ 0 0 0 CON__Q8BGZ7;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9 CON__Q8BGZ7;H6VRG3 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8619 2 651.8612 1301.70785 NaN NaN NaN -0.16203 -0.00010562 NaN NaN NaN NaN 126 0.60268 126 125.69 126.3 0 0 0 0 0.0018756 1 83861 73.067 52.165 1 NaN NaN 0 6935800 6935800 0 + 31630 1308;1180 12011 12340 49317 49317 SLDLDSIIAEVK 12 1 0 Unmodified _SLDLDSIIAEVK_ 0 0 0 CON__Q8BGZ7;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9 CON__Q8BGZ7;H6VRG3 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.8619 2 651.8612 1301.70785 NaN NaN NaN 0.068221 4.4471E-05 NaN NaN NaN NaN 134.54 0.42508 134.54 134.43 134.86 0 0 0 0 4.3732E-73 1 82164 198.62 144.19 1 NaN NaN 0 521720000 521720000 0 + 31631 1308;1180 12011 12340 49318 49318 SLDLDSIIAEVK 12 1 0 Unmodified _SLDLDSIIAEVK_ 0 0 0 CON__Q8BGZ7;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9 CON__Q8BGZ7;H6VRG3 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.8618 2 651.8612 1301.70785 NaN NaN NaN -0.15925 -0.00010381 NaN NaN NaN NaN 134.46 0.39699 134.46 134.36 134.76 0 0 0 0 7.5385E-48 2 81187 179.31 117.71 1 NaN NaN 0 806470000 806470000 0 + 31632 1308;1180 12011 12340 49319;49320 49319 SLDLFNCEITNLEDYR 16 0 1 Unmodified _SLDLFNCEITNLEDYR_ 0 0 0 Q53F20;Q9BTT0;E9PPH5 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1006.9711 2 1001.46475 2000.91496 60733.41 0.73898 0.00074007 -0.64526 -0.00064621 0.093721 9.3858E-05 1001.96571628273 1006.96965108317 121.86 0.86317 121.86 121.55 122.42 -7.6294E-06 202 58 8 0 0 0 1.2378E-08 2 78762 105.65 97.517 1 1.8866 1.9256 0 18784000 7579500 11204000 31633 1784 12012 12341 49321;49322 49321 SLDLFNCEITNLEDYR 16 0 1 Unmodified _SLDLFNCEITNLEDYR_ 0 0 0 Q53F20;Q9BTT0;E9PPH5 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1006.9705 2 1001.46475 2000.91496 61405.46 0.86799 0.00086926 -0.58615 -0.00058701 0.28184 0.00028225 1001.96567946727 1006.96973056288 121.42 0.48456 121.42 121.2 121.68 0 217 36 8 0 0 0 1.4592E-12 2 80357 122.39 111.49 1 1.88 1.9099 0 20387000 6951600 13436000 31634 1784 12012 12341 49323;49324 49323 SLDLFNCEITNLEDYR 16 0 1 Unmodified _SLDLFNCEITNLEDYR_ 0 0 0 Q53F20;Q9BTT0;E9PPH5 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1006.4702 2 1001.46475 2000.91496 59819.12 0.86903 0.0008703 -0.40235 -0.00040294 0.46668 0.00046736 1001.96611814197 1006.46790517046 134.23 0.33017 134.23 134.12 134.45 0 45 15 5 0 0 0 0.0016295 2 81883 44.367 38.983 1 1.0487 0.90273 0 7433100 2617300 4815800 31635 1784 12012 12341 49325;49326 49325 SLDLFNCEITNLEDYR 16 0 1 Unmodified _SLDLFNCEITNLEDYR_ 0 0 0 Q53F20;Q9BTT0;E9PPH5 Q53F20 Q53F20 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1001.9678 2 1001.46475 2000.91496 60524.13 0.82151 0.00082272 -0.8167 -0.0008179 0.0048134 4.8204E-06 1001.96579281473 1006.96963224609 134.1 0.37546 134.1 133.96 134.34 -1.5259E-05 89 20 7 0 0 0 0.00028041 1 80908 56.139 53.353 1 1.0054 0.82888 0 8328800 5042600 3286200 31636 1784 12012 12341 49327 49327 SLDLIESLLR 10 0 1 Unmodified _SLDLIESLLR_ 0 0 0 A5YKK6 A5YKK6 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.845 2 579.840071 1157.66559 NaN NaN NaN -0.013542 -7.8522E-06 NaN NaN NaN NaN 128.66 0.29269 128.66 128.5 128.79 -1.5259E-05 0 0 0 6.8095E-08 1 83878 112.84 60.126 1 NaN NaN 0 1471800 0 1471800 31637 676 12013 12342 49328 49328 SLDLIESLLR 10 0 1 Unmodified _SLDLIESLLR_ 0 0 0 A5YKK6 A5YKK6 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.8409 2 579.840071 1157.66559 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.69 1 128.69 128.19 129.19 0 0 0 0 0.00023767 1 83931 78.334 17.745 1 31638 676 12013 12342 49329 49329 SLDLIESLLR 10 0 1 Unmodified _SLDLIESLLR_ 0 0 0 A5YKK6 A5YKK6 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8451 2 579.840071 1157.66559 85505.29 0.85235 0.00049423 -0.018903 -1.0961E-05 0.83345 0.00048327 579.839886684358 584.844122009663 128.27 0.38036 128.27 128.02 128.4 0 65 23 4 0 0 0 0.00050835 2 85668 85.731 43.132 1 1.6495 1.7515 0 3757300 1413100 2344200 31639 676 12013 12342 49330;49331 49330 SLDLSGLELLSEHLDPK 17 1 0 Unmodified _SLDLSGLELLSEHLDPK_ 0 0 0 A0A140VJD0;Q9UFC0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 937.5047 2 933.496381 1864.97821 66254.77 0.81834 0.00076392 0.045183 4.2178E-05 0.86353 0.0008061 933.496134834872 937.503099377819 123.28 0.31085 123.28 123.15 123.46 0 61 23 4 0 0 0 0.001455 2 79945 40.725 27.524 1 1.2918 1.2977 0 5175800 2023100 3152600 31640 599 12014 12343 49332;49333 49333 SLDLSGLELLSEHLDPK 17 1 0 Unmodified _SLDLSGLELLSEHLDPK_ 0 0 0 A0A140VJD0;Q9UFC0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 937.5046 2 933.496381 1864.97821 63433.13 1.0119 0.0009446 -0.67277 -0.00062803 0.33913 0.00031657 933.997619257031 937.502708112756 122.85 0.40049 122.85 122.62 123.02 0 107 30 6 0 0 0 7.8497E-05 2 81543 62.891 62.891 1 1.6885 1.7018 0 7497300 3870300 3626900 31641 599 12014 12343 49334;49335 49335 SLDMDSIIAEVK 12 1 0 Oxidation (M) _SLDM(ox)DSIIAEVK_ SLDM(1)DSIIAEVK SLDM(119.53)DSIIAEVK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.8441 2 668.836868 1335.65918 70629.64 0.8527 0.00057032 -0.021748 -1.4546E-05 0.83095 0.00055577 668.836965708156 672.844008615458 85.468 0.72415 85.468 85.135 85.859 7.6294E-06 313 59 7 0 0 0 1.254E-08 2 51243 119.53 96.788 1 1.7612 1.9896 0 106830000 36783000 70046000 + 31642 1156 12015 12344 49336;49337 49336 868 SLDMDSIIAEVK 12 1 0 Oxidation (M) _SLDM(ox)DSIIAEVK_ SLDM(1)DSIIAEVK SLDM(108.47)DSIIAEVK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.8371 2 668.836868 1335.65918 71002.52 0.58343 0.00039022 -0.24073 -0.00016101 0.3427 0.00022921 668.836078530877 672.843815199415 84.734 0.87868 84.734 84.269 85.148 0 392 74 8 0 0 0 4.4127E-06 2 51976 108.47 108.47 1 1.8179 2.096 0 184850000 63330000 121520000 + 31643 1156 12015 12344 49338;49339 49339 868 SLDMDSIIAEVK 12 1 0 Oxidation (M) _SLDM(ox)DSIIAEVK_ SLDM(1)DSIIAEVK SLDM(47.29)DSIIAEVK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.8375 2 668.836868 1335.65918 NaN NaN NaN -0.11898 -7.9577E-05 NaN NaN NaN NaN 124.96 0.47392 124.96 124.81 125.28 0 0 0 0 0.0095713 1 74995 47.288 27.501 1 NaN NaN 0 1343000 1343000 0 + 31644 1156 12015 12344 49340 49340 868 SLDMDSIIAEVK 12 1 0 Oxidation (M) _SLDM(ox)DSIIAEVK_ SLDM(1)DSIIAEVK SLDM(63.42)DSIIAEVK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.8458 2 668.836868 1335.65918 75751.5 0.73922 0.00049442 1.0686 0.00071472 1.8078 0.0012091 668.837148208099 672.845439101584 124.85 0.51914 124.85 124.61 125.13 0 95 24 7 0 0 0 0.00045979 2 73952 63.415 49.646 1 1.9227 1.5727 0 4800000 1732100 3068000 + 31645 1156 12015 12344 49341;49342 49341 868 SLDMDSIIAEVK 12 1 0 Unmodified _SLDMDSIIAEVK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.8397 2 660.83941 1319.66427 74078.78 0.99319 0.00065634 -0.071941 -4.7541E-05 0.92125 0.0006088 660.839288451201 664.846385555562 113.52 0.59441 113.52 113.22 113.81 0 216 44 6 0 0 0 2.5884E-08 1 71815 119.53 110.57 1 0.86707 0.85399 0 24276000 12255000 12021000 + 31646 1156 12015 12345 49343 49343 SLDMDSIIAEVK 12 1 0 Unmodified _SLDMDSIIAEVK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.8405 2 660.83941 1319.66427 75104.5 0.71147 0.00047017 0.15616 0.0001032 0.86764 0.00057337 660.839470488188 664.846458999343 112.96 0.56525 112.96 112.67 113.23 0 212 37 8 0 0 0 1.5435E-05 1 73103 105.52 95.257 1 0.878 0.88989 0 29410000 15071000 14339000 + 31647 1156 12015 12345 49344 49344 SLDMDSIIAEVK 12 1 0 Unmodified _SLDMDSIIAEVK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.8467 2 660.83941 1319.66427 73413.92 0.7655 0.00050587 0.059312 3.9196E-05 0.82481 0.00054507 660.83974325181 664.846411493348 124.96 0.7634 124.96 124.7 125.46 -7.6294E-06 171 31 8 0 0 0 9.6174E-05 2 74856 96.015 90.094 1 2.0904 1.621 0 13866000 4192200 9673800 + 31648 1156 12015 12345 49345;49346 49345 SLDMDSIIAEVK 12 1 0 Unmodified _SLDMDSIIAEVK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.8464 2 660.83941 1319.66427 73430.23 0.77049 0.00050917 0.28151 0.00018603 1.052 0.00069521 660.839885843007 664.846665105027 124.86 0.68237 124.86 124.57 125.25 0 180 31 8 0 0 0 0.0002099 2 73850 80.763 75.561 1 2.1744 1.7436 0 19149000 6494200 12654000 + 31649 1156 12015 12345 49347;49348 49347 SLDNNYSTPNER 12 0 1 Unmodified _SLDNNYSTPNER_ 0 0 0 Q7KZJ3;A0A024R4Z0;Q96FS1;Q68DU0;C9JZR2;O60716;H0YC95 Q7KZJ3 Q7KZJ3 CTNND1;DKFZp781O2021 Catenin delta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.3182 2 705.318219 1408.62189 74081.4 0.46077 0.00032499 -0.010137 -7.1499E-06 0.45063 0.00031784 705.31805797951 710.323356913872 32.173 0.19677 32.173 32.072 32.269 0 32 10 6 0 0 0 0.020754 1 13776 39.148 29.46 1 1.3641 1.2087 0 1236700 614200 622470 31650 165 12016 12346 49349 49349 SLDNNYSTPNER 12 0 1 Unmodified _SLDNNYSTPNER_ 0 0 0 Q7KZJ3;A0A024R4Z0;Q96FS1;Q68DU0;C9JZR2;O60716;H0YC95 Q7KZJ3 Q7KZJ3 CTNND1;DKFZp781O2021 Catenin delta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.3178 2 705.318219 1408.62189 73568.38 0.55145 0.00038895 -0.16249 -0.00011461 0.38896 0.00027434 705.317928291118 710.322356338222 32.378 0.25427 32.378 32.271 32.525 0 38 12 6 0 0 0 0.018528 2 13450 40.715 31.028 1 1.2439 1.073 0 1163200 539870 623290 31651 165 12016 12346 49350;49351 49350 SLDPADERDDVLAK 14 1 1 Unmodified _SLDPADERDDVLAK_ 0 0 1 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.8839 2 772.383559 1542.75257 69341.3 0.64244 0.00049621 -1.4614 -0.0011288 -0.81897 -0.00063256 772.381870593696 781.394726023203 50.102 0.48082 50.102 49.951 50.432 0 155 43 5 0 0 0 0.00080368 2 28294 76.927 66.556 1 0.42237 0.48418 0 23424000 12772000 10653000 31652 591 12017 12347 49352;49353 49353 SLDPADERDDVLAK 14 1 1 Unmodified _SLDPADERDDVLAK_ 0 0 1 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.2576 3 515.258132 1542.75257 83443.74 0.41942 0.00021611 -0.33602 -0.00017314 0.083394 4.2969E-05 515.257567413076 521.26564299192 50.085 0.49583 50.085 49.926 50.422 0 209 44 6 0 0 0 0.0034051 3 28235 32.275 32.275 1 0.68104 0.79897 0 58155000 33433000 24722000 31653 591 12017 12347 49354;49355;49356 49354 SLDPENSETELER 13 0 1 Unmodified _SLDPENSETELER_ 0 0 0 A0MZ66 A0MZ66 A0MZ66 KIAA1598 Shootin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.8519 2 759.849549 1517.68455 NaN NaN NaN 1.2638 0.00096033 NaN NaN NaN NaN 51.719 0.21398 51.719 51.61 51.824 -3.8147E-06 0 0 0 0.0033495 1 29371 65.5 45.197 1 NaN NaN 0 2550400 0 2550400 31654 644 12018 12348 49357 49357 SLDPENSETELER 13 0 1 Unmodified _SLDPENSETELER_ 0 0 0 A0MZ66 A0MZ66 A0MZ66 KIAA1598 Shootin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.855 2 759.849549 1517.68455 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.876 1 51.876 51.376 52.376 3.8147E-06 0 0 0 0.0041877 1 29479 61.344 46.371 1 31655 644 12018 12348 49358 49358 SLDQAINDK 9 1 0 Unmodified _SLDQAINDK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.2576 2 502.256371 1002.49819 95106.91 0.28205 0.00014166 0.30768 0.00015453 0.58974 0.0002962 502.256623227454 506.263532939393 29.625 0.16694 29.625 29.551 29.718 0 39 12 4 0 0 0 0.00056832 2 14370 97.431 71.054 1 0.99816 1.0035 0 18570000 9431500 9138400 31656 803 12019 12349 49359;49360 49359 SLDQAINDK 9 1 0 Unmodified _SLDQAINDK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.264 2 502.256371 1002.49819 NaN NaN NaN 0.16973 8.5247E-05 NaN NaN NaN NaN 29.139 0.16911 29.139 29.049 29.218 0 0 0 0 0.00014796 1 14018 95.815 62.3 1 NaN NaN 0 11607000 0 11607000 31657 803 12019 12349 49361 49361 SLDQAINDK 9 1 0 Unmodified _SLDQAINDK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.2631 2 502.256371 1002.49819 108890.4 0.38836 0.00019506 0.13411 6.7358E-05 0.52247 0.00026242 502.256674331223 506.263241457784 33.553 0.19926 33.553 33.461 33.66 0 42 15 4 0 0 0 0.003784 1 14702 70.919 45.182 1 1.3854 1.1561 0 1795800 783880 1011900 31658 803 12019 12349 49362 49362 SLDQAINDK 9 1 0 Unmodified _SLDQAINDK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.2636 2 502.256371 1002.49819 96911.27 0.16305 8.1894E-05 0.74394 0.00037365 0.90699 0.00045554 502.256873348953 506.263521245189 33.64 0.17961 33.64 33.567 33.746 0 32 12 4 0 0 0 0.019235 1 14320 51.346 33.96 1 1.4804 1.1894 0 2484900 939590 1545300 31659 803 12019 12349 49363 49363 SLEAQVAHADQQLR 14 0 1 Unmodified _SLEAQVAHADQQLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.9426 3 522.605866 1564.79577 84136.52 0.56999 0.00029788 0.12458 6.5105E-05 0.69457 0.00036299 522.605888359266 525.941993408756 52.621 0.63755 52.621 52.235 52.873 0 254 49 8 0 0 0 5.4388E-05 2 29900 70.889 70.889 1 0.90049 1.0338 0 52270000 27454000 24816000 31660 186;1747 12020 12350 49364;49365 49364 SLEAQVAHADQQLR 14 0 1 Unmodified _SLEAQVAHADQQLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.9103 2 783.40516 1564.79577 68013.68 0.83133 0.00065127 0.4125 0.00032316 1.2438 0.00097443 783.405518738297 788.409864083284 52.635 0.43946 52.635 52.386 52.825 0 140 33 5 0 0 0 6.0826E-21 2 30045 140.01 124.47 1 0.73873 0.75636 0 20944000 12445000 8499000 31661 186;1747 12020 12350 49366;49367 49366 SLEAQVAHADQQLR 14 0 1 Unmodified _SLEAQVAHADQQLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.6061 3 522.605866 1564.79577 83267.24 0.036967 1.9319E-05 0.029454 1.5393E-05 0.066421 3.4712E-05 522.605768963119 525.941995939195 63.959 0.75543 63.959 63.666 64.421 0 320 62 7 0 0 0 0.0022596 3 33022 40.552 40.552 1 1.5851 1.3302 0 10026000 4279600 5746400 31662 186;1747 12020 12350 49368;49369;49370 49370 SLEAQVAHADQQLR 14 0 1 Unmodified _SLEAQVAHADQQLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.9417 3 522.605866 1564.79577 83172.73 0.076851 4.0163E-05 0.06986 3.6509E-05 0.14671 7.6672E-05 522.605865551133 525.941998038172 64.475 0.67059 64.475 64.18 64.85 -7.6294E-06 322 57 7 0 0 0 0.021187 1 32398 18.596 18.596 1 1.6153 1.3267 0 8688500 3326200 5362300 31663 186;1747 12020 12350 49371 49371 SLEAQVAHADQQLR 14 0 1 Unmodified _SLEAQVAHADQQLR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.41 2 783.40516 1564.79577 68550.74 0.34833 0.00027288 0.090692 7.1048E-05 0.43902 0.00034393 783.40543079102 788.409609747302 64.492 0.59064 64.492 64.19 64.78 0 216 50 5 0 0 0 2.1777E-06 2 32414 106.26 95.949 1 1.6657 1.3887 0 6739900 2205000 4534900 31664 186;1747 12020 12350 49372;49373 49372 SLEDALAEAQR 11 0 1 Unmodified _SLEDALAEAQR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 601.8038 2 601.804217 1201.59388 77499.31 0.54635 0.0003288 -0.42875 -0.00025802 0.1176 7.0774E-05 601.803921136297 606.808138005872 70.086 1.1329 70.086 69.806 70.939 0 472 98 9 0 0 0 1.5001E-23 3 40712 174.02 143.86 1 0.85301 1.0104 0 437600000 232730000 204870000 31665 69 12021 12351 49374;49375;49376 49375 SLEDALAEAQR 11 0 1 Unmodified _SLEDALAEAQR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.8089 2 601.804217 1201.59388 78075.66 0.68081 0.00040972 -0.042418 -2.5528E-05 0.63839 0.00038419 601.804155096195 606.808365109748 68.95 1.2844 68.95 68.705 69.989 0 503 108 10 0 0 0 5.9987E-17 2 40957 157.96 126.88 1 0.80306 0.93829 0 572240000 320560000 251680000 31666 69 12021 12351 49377;49378 49378 SLEDALAEAQR 11 0 1 Unmodified _SLEDALAEAQR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.8087 2 601.804217 1201.59388 77773.18 0.3615 0.00021755 0.12592 7.5779E-05 0.48741 0.00029333 601.804329775764 606.808388732227 80.142 1.1811 80.142 79.836 81.017 0 397 78 9 0 0 0 0.00013444 2 43304 95.642 69.258 1 1.7082 1.474 0 81756000 30494000 51262000 31667 69 12021 12351 49379;49380 49380 SLEDALAEAQR 11 0 1 Unmodified _SLEDALAEAQR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 606.8083 2 601.804217 1201.59388 77126.59 0.55929 0.00033658 -0.17163 -0.00010329 0.38766 0.00023329 601.804049540276 606.808240591636 80.516 1.6608 80.516 80.167 81.828 7.6294E-06 469 101 8 0 0 0 1.9293E-05 2 42653 105.2 73.261 1 1.6956 1.4798 0 78422000 28362000 50060000 31668 69 12021 12351 49381;49382 49382 SLEDLQDEYDFK 12 1 0 Unmodified _SLEDLQDEYDFK_ 0 0 0 J3KPM9;P42224;E7EPD2;D2KFR9;A5D905 J3KPM9 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 755.3469 2 751.338286 1500.66202 NaN NaN NaN 0.060745 4.564E-05 NaN NaN NaN NaN 101.73 0.27174 101.73 101.5 101.77 0 0 0 0 0.043174 1 57593 42.718 29.364 1 NaN NaN 0 1452500 0 1452500 31669 1326 12022 12352 49383 49383 SLEEEVTCSICLDYLR 16 0 1 Unmodified _SLEEEVTCSICLDYLR_ 0 0 0 A0A024RCP3;Q12899;A2AE48;A0A0G2JIW2;A2AE50;Q5SPU2 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 994.4619 2 993.960991 1985.90743 NaN NaN NaN -0.16838 -0.00016736 NaN NaN NaN NaN 116.76 0.31128 116.76 116.61 116.92 0 0 0 0 0.018756 1 74528 41.684 33.818 1 NaN NaN 0 4166300 4166300 0 31670 365 12023 12353 49384 49384 SLEEGEGPIAVIMTPTR 17 0 1 Oxidation (M) _SLEEGEGPIAVIM(ox)TPTR_ SLEEGEGPIAVIM(1)TPTR SLEEGEGPIAVIM(40.07)TPTR 0 1 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 913.4648 2 908.461484 1814.90841 66121.52 0.59266 0.00053841 -0.86884 -0.00078931 -0.27618 -0.0002509 908.460097133517 913.966892479465 95.599 0.62247 95.599 95.248 95.87 0 142 49 5 0 0 0 0.00075029 1 58048 40.066 40.066 1 1.8386 1.924 0 10803000 3413500 7389400 31671 511 12024 12354 49385 49385 359 SLEEGEGPIAVIMTPTR 17 0 1 Oxidation (M) _SLEEGEGPIAVIM(ox)TPTR_ SLEEGEGPIAVIM(1)TPTR SLEEGEGPIAVIM(96.73)TPTR 0 1 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.4648 2 908.461484 1814.90841 63916.04 0.5693 0.00051719 -0.51113 -0.00046434 0.058174 5.2849E-05 908.461192841675 913.464688785061 94.829 0.56685 94.829 94.542 95.108 0 114 47 5 0 0 0 1.7937E-07 1 58996 96.734 96.734 1 1.9901 2.0034 0 10819000 4351700 6467100 31672 511 12024 12354 49386 49386 359 SLEEIYLFSLPIK 13 1 0 Unmodified _SLEEIYLFSLPIK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;E9PQD7;E9PPT0;Q8NI61;D3DU83;H3BNG3;H0YE27 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.4443 2 776.437075 1550.8596 68964.37 0.89335 0.00069363 0.23311 0.00018099 1.1265 0.00087463 776.437210998932 780.444271028177 132.73 1.1739 132.73 132.29 133.46 0 409 56 10 0 0 0 1.708E-38 2 86497 177.57 177.57 1 1.0732 1.2083 0 122110000 59051000 63060000 31673 1485 12025 12355 49387;49388 49387 SLEEIYLFSLPIK 13 1 0 Unmodified _SLEEIYLFSLPIK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;E9PQD7;E9PPT0;Q8NI61;D3DU83;H3BNG3;H0YE27 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.4446 2 776.437075 1550.8596 68472.97 0.94743 0.00073562 0.14492 0.00011252 1.0923 0.00084814 776.43721686527 780.444091243757 132.29 1.3902 132.29 131.72 133.11 1.5259E-05 540 84 10 0 0 0 1.0099E-18 2 88333 141.88 141.88 1 1.0671 1.2227 0 164510000 80566000 83942000 31674 1485 12025 12355 49389;49390 49389 SLEEIYLFSLPIK 13 1 0 Unmodified _SLEEIYLFSLPIK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;E9PQD7;E9PPT0;Q8NI61;D3DU83;H3BNG3;H0YE27 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.438 2 776.437075 1550.8596 68044.16 0.89251 0.00069298 -0.31308 -0.00024308 0.57943 0.00044989 776.437241654463 780.444315309986 134.89 0.33784 134.89 134.66 135 0 25 6 9 0 0 0 0.0020555 2 82613 55.314 55.314 1 0.49986 0.43006 0 90420000 48938000 41483000 31675 1485 12025 12355 49391;49392 49391 SLEEIYLFSLPIK 13 1 0 Unmodified _SLEEIYLFSLPIK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PMM9;E9PQD7;E9PPT0;Q8NI61;D3DU83;H3BNG3;H0YE27 P15880 P15880 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.4449 2 776.437075 1550.8596 67893.56 1.0232 0.00079445 -0.13859 -0.0001076 0.88462 0.00068685 776.437178068199 780.444326025728 134.84 0.13826 134.84 134.76 134.9 1.5259E-05 18 2 9 0 0 0 1.9332E-05 2 81673 99.283 99.283 1 0.74831 0.63767 0 89915000 49282000 40633000 31676 1485 12025 12355 49393;49394 49393 SLEGADLPNLLFYGPPGTGK 20 1 0 Unmodified _SLEGADLPNLLFYGPPGTGK_ 0 0 0 P35249;C9J8M3;C9JZI1;C9JXZ7;C9JTT7;C9JGY5;F8WE44 P35249 P35249 RFC4 Replication factor C subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1027.5364 2 1023.53075 2045.04696 61473.38 0.67496 0.00069084 0.63498 0.00064992 1.3099 0.0013408 1023.53069022301 1027.53795603419 125.63 0.62289 125.63 125.37 125.99 7.6294E-06 195 42 8 0 0 0 9.0063E-05 2 81584 44.511 44.511 1 1.0396 1.084 0 16802000 8131100 8671300 31677 1541 12026 12356 49395;49396 49395 SLEGADLPNLLFYGPPGTGK 20 1 0 Unmodified _SLEGADLPNLLFYGPPGTGK_ 0 0 0 P35249;C9J8M3;C9JZI1;C9JXZ7;C9JTT7;C9JGY5;F8WE44 P35249 P35249 RFC4 Replication factor C subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1023.5301 2 1023.53075 2045.04696 60739.92 0.51087 0.00052289 0.64828 0.00066354 1.1592 0.0011864 1024.03299107105 1028.03923096936 125.27 0.44987 125.27 125.04 125.49 -7.6294E-06 171 31 9 0 0 0 0.00015459 1 83314 40.552 35.751 1 1.0627 1.0881 0 17519000 9609700 7909200 31678 1541 12026 12356 49397 49397 SLEGGNFIAGVLIQGTQER 19 0 1 Unmodified _SLEGGNFIAGVLIQGTQER_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 995.024 2 995.023628 1988.0327 61571.12 0.9354 0.00093074 -0.19324 -0.00019228 0.74215 0.00073846 995.024237940764 1000.52884404465 119.02 0.49656 119.02 118.8 119.29 0 106 30 6 0 0 0 0.00028629 1 76563 44.457 44.457 1 3.0654 3.166 0 23835000 4514500 19320000 31679 397;1622 12027 12357 49398 49398 SLEGTEAQVFK 11 1 0 Unmodified _SLEGTEAQVFK_ 0 0 0 B4DIX0;Q13045 B4DIX0 B4DIX0 FLII Protein flightless-1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.8209 2 604.81151 1207.60847 79473.23 0.56231 0.00034009 0.33795 0.0002044 0.90026 0.00054449 605.313413645592 608.81906946268 61.799 0.43274 61.799 61.651 62.084 0 88 39 4 0 0 0 0.02141 1 36257 43.282 20.542 1 1.4188 1.4173 0 6586300 2680600 3905800 31680 984 12028 12358 49399 49399 SLEHSGSLDDPNR 13 0 1 Unmodified _SLEHSGSLDDPNR_ 0 0 0 Q9ULJ3;Q5H9S0 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.8303 2 713.831494 1425.64843 71576.37 0.096325 6.876E-05 -0.3069 -0.00021907 -0.21057 -0.00015031 713.831248876881 718.835734753414 22.011 0.21763 22.011 21.89 22.107 0 25 8 4 0 0 0 2.3253E-13 1 8081 128.01 128.01 1 0.62577 0.62544 0 9042700 5501000 3541600 31681 2109 12029 12359 49400 49400 SLEQNIQLPAALLSR 15 0 1 Unmodified _SLEQNIQLPAALLSR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.9705 2 826.970136 1651.92572 67096.22 0.8091 0.0006691 0.34942 0.00028896 1.1585 0.00095807 826.970369620062 831.974287808769 116.69 0.51197 116.69 116.43 116.94 0 168 34 6 0 0 0 0.00021915 1 74707 62.408 56.688 1 1.2073 1.2399 0 36301000 16858000 19444000 31682 560 12030 12360 49401 49401 SLEQNIQLPAALLSR 15 0 1 Unmodified _SLEQNIQLPAALLSR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.9716 2 826.970136 1651.92572 66969.95 0.90185 0.0007458 0.31059 0.00025685 1.2124 0.0010027 826.970259573033 831.974078773305 116.15 0.50691 116.15 115.88 116.39 0 158 32 6 0 0 0 2.6935E-30 2 75994 151.16 136.48 1 1.0996 1.2415 0 47142000 21108000 26033000 31683 560 12030 12360 49402;49403 49402 SLEQNIQLPAALLSR 15 0 1 Unmodified _SLEQNIQLPAALLSR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 826.9713 2 826.970136 1651.92572 66460.92 1.1899 0.00098401 -0.18559 -0.00015348 1.0043 0.00083054 826.970282277449 831.974407078986 128.68 0.4865 128.68 128.42 128.91 0 126 21 8 0 0 0 8.793E-05 1 77649 83.182 83.182 1 0.79389 0.65118 0 16956000 9691100 7265000 31684 560 12030 12360 49404 49404 SLEQNIQLPAALLSR 15 0 1 Unmodified _SLEQNIQLPAALLSR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.4751 2 826.970136 1651.92572 66762.68 0.96776 0.00080031 -0.5132 -0.0004244 0.45456 0.00037591 827.470920873634 831.974221973386 128.41 0.5323 128.41 128.18 128.72 0 129 22 8 0 0 0 0.001683 2 76594 47.062 47.062 1 0.76273 0.63437 0 15542000 8612800 6929600 31685 560 12030 12360 49405;49406 49405 SLESCPGETVVAEDPAGLK 19 1 0 Unmodified _SLESCPGETVVAEDPAGLK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.4768 2 979.972412 1957.93027 61819.57 0.49021 0.0004804 0.40601 0.00039788 0.89623 0.00087828 979.972461443496 983.97976359825 82.493 0.45171 82.493 82.336 82.788 -7.6294E-06 164 36 6 0 0 0 5.6509E-06 5 49232 79.466 79.466 1 0.71797 0.75464 0 15331000 9669800 5660700 31686 44 12031 12361 49407;49408;49409;49410;49411 49408 SLESCPGETVVAEDPAGLK 19 1 0 Unmodified _SLESCPGETVVAEDPAGLK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 979.9729 2 979.972412 1957.93027 62110.38 0.56194 0.00055068 0.45076 0.00044173 1.0127 0.00099241 979.972454189517 983.979965230603 81.648 0.44429 81.648 81.402 81.846 0 136 36 5 0 0 0 2.7335E-08 2 49891 94.688 94.688 1 0.71069 0.70941 0 14744000 7219100 7524500 31687 44 12031 12361 49412;49413 49413 SLESCPGETVVAEDPAGLK 19 1 0 Unmodified _SLESCPGETVVAEDPAGLK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 983.9792 2 979.972412 1957.93027 60775.95 0.23018 0.00022557 0.13867 0.00013589 0.36885 0.00036146 979.972612134961 983.979650329784 94.715 0.44701 94.715 94.485 94.932 0 171 26 9 0 0 0 0.00018911 2 52140 46.481 46.481 1 1.6577 1.3608 0 9196600 3698100 5498500 31688 44 12031 12361 49414;49415 49415 SLESINSR 8 0 1 Unmodified _SLESINSR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3;A0A0C4DH44 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.2381 2 453.237981 904.461409 90243.16 0.006787 3.0761E-06 0.06098 2.7638E-05 0.067767 3.0714E-05 453.238029721215 458.242000229168 25.755 0.6323 25.755 25.5 26.132 0 116 33 4 0 0 0 0.00037935 2 11216 133.12 63.118 1 0.78604 0.9295 0 274040000 154070000 119960000 31689 276 12032 12362 49416;49417 49416 SLESINSR 8 0 1 Unmodified _SLESINSR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3;A0A0C4DH44 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.2382 2 453.237981 904.461409 88784.84 0.61109 0.00027697 0.56446 0.00025583 1.1755 0.0005328 453.238211957915 458.242022529027 25.495 0.55992 25.495 25.185 25.745 0 115 25 8 0 0 0 0.0022722 1 11072 101.28 40.524 1 0.89926 1.036 0 221750000 128920000 92833000 31690 276 12032 12362 49418 49418 SLESINSR 8 0 1 Unmodified _SLESINSR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3;A0A0C4DH44 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 453.2383 2 453.237981 904.461409 89173.98 0.12746 5.777E-05 0.029972 1.3585E-05 0.15743 7.1355E-05 453.238091485328 458.241852075087 28.466 0.61947 28.466 28.2 28.819 -1.9073E-06 108 35 4 0 0 0 0.013109 1 11372 66.073 28.515 1 0.80602 0.67951 0 28487000 15740000 12747000 31691 276 12032 12362 49419 49419 SLESINSR 8 0 1 Unmodified _SLESINSR_ 0 0 0 E5RI99;A0A024R9D3;P62888;E5RJH3;A0A0C4DH44 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 453.2376 2 453.237981 904.461409 89792.59 -0.31531 -0.00014291 -0.071335 -3.2332E-05 -0.38665 -0.00017524 453.237783306515 458.241942713958 28.514 0.53395 28.514 28.328 28.862 0 121 33 6 0 0 0 0.063127 1 10878 38.962 10.788 1 0.7899 0.65686 0 6062100 3198600 2863500 31692 276 12032 12362 49420 49420 SLESLDTSLFAK 12 1 0 Unmodified _SLESLDTSLFAK_ 0 0 0 Q53HM6;B3KY12;A8K7V1;A8K566;Q12874;B4DW90 Q53HM6 Q53HM6 SF3A3 Splicing factor 3A subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8452 2 655.84555 1309.67655 72948.49 0.52715 0.00034573 3.4065 0.0022341 3.9337 0.0025799 655.845255556433 660.359764669639 102.6 0.51853 102.6 102.35 102.87 0 113 44 4 0 0 0 0.0056707 1 63098 50.353 45.413 1 1.5597 1.6026 0 10676000 3110800 7565000 31693 747 12033 12363 49421 49421 SLESLHSFVAAATK 14 1 0 Unmodified _SLESLHSFVAAATK_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.3922 2 730.890823 1459.76709 77152.44 1.1776 0.00086069 -0.080121 -5.856E-05 1.0975 0.00080213 730.890790544844 734.89770804642 84.067 0.54045 84.067 83.938 84.479 7.6294E-06 101 41 4 0 0 0 0.039826 1 50398 27.149 27.149 1 1.4389 1.4834 0 12839000 5562100 7277200 31694 1754 12034 12364 49422 49422 SLESNPEQLQAMR 13 0 1 Oxidation (M) _SLESNPEQLQAM(ox)R_ SLESNPEQLQAM(1)R SLESNPEQLQAM(50.29)R 0 1 0 B7Z700;Q5JR04;Q9HCE1;Q9H8T8 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.8651 2 759.864479 1517.71441 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.286 1 43.286 42.786 43.786 -3.8147E-06 0 0 0 0.0072993 1 23144 50.292 21.565 1 31695 1102 12035 12365 49423 49423 845 SLESNPEQLQAMR 13 0 1 Oxidation (M) _SLESNPEQLQAM(ox)R_ SLESNPEQLQAM(1)R SLESNPEQLQAM(57.79)R 0 1 0 B7Z700;Q5JR04;Q9HCE1;Q9H8T8 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.8652 2 759.864479 1517.71441 NaN NaN NaN 0.34023 0.00025853 NaN NaN NaN NaN 42.776 0.048096 42.776 42.733 42.781 0 0 0 0 0.0016861 1 23123 57.785 43.667 1 NaN NaN 0 1714900 1714900 0 31696 1102 12035 12365 49424 49424 845 SLESNPEQLQAMR 13 0 1 Oxidation (M) _SLESNPEQLQAM(ox)R_ SLESNPEQLQAM(1)R SLESNPEQLQAM(48)R 0 1 0 B7Z700;Q5JR04;Q9HCE1;Q9H8T8 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.8894 2 759.864479 1517.71441 74299.16 0.89535 0.00068035 -0.63512 -0.0004826 0.26023 0.00019774 759.863667133735 764.868509818271 42.619 0.40318 42.619 42.377 42.781 3.8147E-06 55 33 4 0 0 0 0.046911 1 23088 48.004 48.004 1 2.3445 2.3597 0 10856000 2178600 8677700 31697 1102 12035 12365 49425 49425 845 SLETENAGLR 10 0 1 Unmodified _SLETENAGLR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.2845 2 545.280377 1088.5462 81729.95 0.564 0.00030754 0.05254 2.8649E-05 0.61654 0.00033619 545.280241133421 550.284374976128 33.972 1.1771 33.972 33.432 34.609 0 562 107 8 0 0 0 3.3533E-06 2 16723 110.22 74.338 1 1.1245 1.2838 0 122710000 53450000 69264000 31698 1440 12036 12366 49426;49427 49426 SLETENAGLR 10 0 1 Unmodified _SLETENAGLR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.7834 2 545.280377 1088.5462 80525.66 0.28356 0.00015462 0.34779 0.00018964 0.63136 0.00034427 545.280398725303 550.284592587545 33.422 0.97108 33.422 32.922 33.893 0 456 83 8 0 0 0 0.00083665 1 16498 80.438 44.944 1 1.1313 1.3054 0 238670000 111860000 126810000 31699 1440 12036 12366 49428 49428 SLETENAGLR 10 0 1 Unmodified _SLETENAGLR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.7831 2 545.280377 1088.5462 81484.64 0.40052 0.00021839 0.21003 0.00011452 0.61055 0.00033292 545.280225536256 550.284515449271 38.898 0.75647 38.898 38.5 39.257 0 218 59 4 0 0 0 0.013114 2 17636 49.715 23.978 1 1.2909 1.0739 0 21825000 8764000 13061000 31700 1440 12036 12366 49429;49430 49430 SLETENAGLR 10 0 1 Unmodified _SLETENAGLR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.2842 2 545.280377 1088.5462 81223.08 0.2762 0.00015061 1.7733 0.00096694 2.0495 0.0011175 545.280374454732 550.284554638527 39.007 1.0696 39.007 38.621 39.69 0 393 82 8 0 0 0 0.00086964 2 17192 79.906 44.026 1 1.4562 1.2505 0 21447000 8015800 13431000 31701 1440 12036 12366 49431;49432 49431 SLETENSALQLQVTER 16 0 1 Unmodified _SLETENSALQLQVTER_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 914.4713 2 909.465612 1816.91667 64331.79 0.6445 0.00058615 0.16426 0.00014939 0.80876 0.00073554 909.465613913713 914.469841525332 82.214 0.7294 82.214 81.799 82.528 7.6294E-06 312 62 8 0 0 0 1.9287E-08 3 48884 101.72 101.72 1 1.4357 1.4848 0 37284000 17650000 19634000 31702 1502 12037 12367 49433;49434;49435 49433 SLETENSALQLQVTER 16 0 1 Unmodified _SLETENSALQLQVTER_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.4685 2 909.465612 1816.91667 64330.38 0.70498 0.00064116 -0.12167 -0.00011066 0.58331 0.0005305 909.465419931933 914.469693985737 81.366 0.65402 81.366 80.947 81.601 0 320 55 8 0 0 0 2.6627E-05 3 49866 85.554 85.554 1 1.4868 1.7196 0 68538000 33849000 34689000 31703 1502 12037 12367 49436;49437;49438 49438 SLETENSALQLQVTER 16 0 1 Unmodified _SLETENSALQLQVTER_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 914.4669 2 909.465612 1816.91667 63301.16 0.54523 0.00049587 0.037256 3.3883E-05 0.58249 0.00052975 909.967491706008 914.469678451177 94.392 0.54856 94.392 94.069 94.618 0 123 32 5 0 0 0 0.0012976 2 52873 45.79 45.79 1 2.7172 2.2779 0 4087500 1268300 2819200 31704 1502 12037 12367 49439;49440 49440 SLETENSALQLQVTER 16 0 1 Unmodified _SLETENSALQLQVTER_ 0 0 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 914.4706 2 909.465612 1816.91667 64582.4 0.57102 0.00051933 0.078089 7.1019E-05 0.64911 0.00059034 909.465295875722 914.469771875183 94.285 0.60353 94.285 94.03 94.634 0 159 37 6 0 0 0 0.00015499 1 51951 71.548 71.548 1 2.824 2.4085 0 4549000 1252100 3296900 31705 1502 12037 12367 49441 49441 SLETENSALQLQVTEREEVR 20 0 2 Unmodified _SLETENSALQLQVTEREEVR_ 0 0 1 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.8374 3 777.73107 2330.17138 69454.03 0.44189 0.00034367 0.46441 0.00036118 0.90629 0.00070485 778.065386410633 784.737773731374 76.709 0.46075 76.709 76.496 76.957 0 120 33 5 0 0 0 0.0016935 1 46310 38.453 38.453 1 1.1429 1.2486 0 19147000 8538600 10609000 31706 1502 12038 12368 49442 49442 SLETENSALQLQVTEREEVR 20 0 2 Unmodified _SLETENSALQLQVTEREEVR_ 0 0 1 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 778.0665 3 777.73107 2330.17138 68089.46 0.67196 0.0005226 0.20411 0.00015874 0.87607 0.00068134 778.065438386127 784.737860857003 89.615 0.55122 89.615 89.371 89.923 0 157 35 6 0 0 0 4.1085E-05 1 49589 44.577 44.577 1 1.9184 1.6245 0 9060500 3429900 5630600 31707 1502 12038 12368 49443 49443 SLEYCSTASIDSENPPDLNK 20 1 0 Unmodified _SLEYCSTASIDSENPPDLNK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1120.5033 2 1120.50481 2238.99506 58117.93 0.18475 0.00020702 -0.1322 -0.00014813 0.052551 5.8884E-05 1121.0066170947 1125.01329393829 78.072 0.44618 78.072 77.848 78.294 0 185 35 8 0 0 0 2.76E-14 2 46085 112.42 112.42 1 0.68254 0.67446 0 25643000 14311000 11332000 31708 1665 12039 12369 49444;49445 49444 SLEYCSTASIDSENPPDLNK 20 1 0 Unmodified _SLEYCSTASIDSENPPDLNK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1125.0115 2 1120.50481 2238.99506 58215.35 0.090236 0.00010111 -0.1033 -0.00011574 -0.013061 -1.4635E-05 1121.00637041859 1125.01302005767 77.287 0.45994 77.287 77.068 77.528 7.6294E-06 190 36 7 0 0 0 1.9858E-18 3 46796 124.3 124.3 1 0.62296 0.67579 0 22221000 11722000 10499000 31709 1665 12039 12369 49446;49447;49448 49448 SLEYCSTASIDSENPPDLNK 20 1 0 Unmodified _SLEYCSTASIDSENPPDLNK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1121.0066 2 1120.50481 2238.99506 57156.23 -0.11654 -0.00013058 0.045886 5.1416E-05 -0.070649 -7.9163E-05 1121.00649169634 1124.51227275116 89.743 0.6481 89.743 89.433 90.081 0 264 40 9 0 0 0 0.0001558 1 48733 40.477 40.477 1 0.36287 0.29249 0 13691000 9778100 3912600 31710 1665 12039 12369 49449 49449 SLFAHDDSVMYLQFVPK 17 1 0 Oxidation (M) _SLFAHDDSVM(ox)YLQFVPK_ SLFAHDDSVM(1)YLQFVPK SLFAHDDSVM(83.63)YLQFVPK 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.0014 3 671.664393 2011.97135 74398.09 1.0937 0.00073462 -0.37889 -0.00025448 0.71485 0.00048014 671.998642970436 674.335791225298 110.82 0.78213 110.82 110.48 111.26 0 247 53 8 0 0 0 5.1633E-06 2 69603 83.633 74.218 1 1.2331 1.3434 0 49539000 21767000 27772000 31711 1827 12040 12370 49450;49451 49451 1687 SLFAHDDSVMYLQFVPK 17 1 0 Oxidation (M) _SLFAHDDSVM(ox)YLQFVPK_ SLFAHDDSVM(1)YLQFVPK SLFAHDDSVM(97.42)YLQFVPK 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.9993 3 671.664393 2011.97135 74162.12 0.85863 0.00057671 -0.40005 -0.0002687 0.45858 0.00030801 671.664434958901 674.669587894819 109.91 0.70781 109.91 109.6 110.31 7.6294E-06 247 44 9 0 0 0 7.4879E-08 3 70636 97.417 89.769 1 1.2498 1.3823 0 45205000 19758000 25446000 31712 1827 12040 12370 49452;49453;49454 49454 1687 SLFAHDDSVMYLQFVPK 17 1 0 Oxidation (M) _SLFAHDDSVM(ox)YLQFVPK_ SLFAHDDSVM(1)YLQFVPK SLFAHDDSVM(53.17)YLQFVPK 0 1 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.3362 3 671.664393 2011.97135 74108.58 0.76186 0.00051172 1.1547 0.00077554 1.9165 0.0012873 671.999026595057 674.335949927792 120.65 0.61507 120.65 120.44 121.05 0 184 30 11 0 0 0 4.2143E-05 1 70750 53.168 48.363 1 0.98647 0.8056 0 8064300 3996000 4068300 31713 1827 12040 12370 49455 49455 1687 SLFGQLHPPDEGHGD 15 0 0 Unmodified _SLFGQLHPPDEGHGD_ 0 0 0 Q9NY61;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.9146 3 535.914588 1604.72193 NaN NaN NaN -0.016481 -8.8325E-06 NaN NaN NaN NaN 75.979 1.1235 75.979 75.485 76.608 0 0 0 0 0.011143 1 44532 30.133 17.773 1 31714 2080 12041 12371 49456 49456 SLFGQLHPPDEGHGD 15 0 0 Unmodified _SLFGQLHPPDEGHGD_ 0 0 0 Q9NY61;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.8716 2 803.368244 1604.72193 NaN NaN NaN -0.47719 -0.00038336 NaN NaN NaN NaN 74.581 0.64044 74.581 74.314 74.954 0 0 0 0 0.014932 1 44734 46.73 28.418 1 31715 2080 12041 12371 49457 49457 SLFGQLHPPDEGHGD 15 0 0 Unmodified _SLFGQLHPPDEGHGD_ 0 0 0 Q9NY61;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.9149 3 535.914588 1604.72193 NaN NaN NaN -0.22782 -0.00012209 NaN NaN NaN NaN 74.589 1.0954 74.589 74.139 75.235 0 0 0 0 0.00013926 1 44748 51.009 39.747 1 31716 2080 12041 12371 49458 49458 SLFGQLHPPDEGHGD 15 0 0 Unmodified _SLFGQLHPPDEGHGD_ 0 0 0 Q9NY61;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 535.915 3 535.914588 1604.72193 NaN NaN NaN -0.079851 -4.2793E-05 NaN NaN NaN NaN 86.546 1.3876 86.546 85.78 87.168 0 0 0 0 0.0091837 1 47361 28.283 23.106 1 31717 2080 12041 12371 49459 49459 SLFGQLHPPDEGHGD 15 0 0 Unmodified _SLFGQLHPPDEGHGD_ 0 0 0 Q9NY61;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.9147 3 535.914588 1604.72193 NaN NaN NaN -0.23797 -0.00012753 NaN NaN NaN NaN 86.527 1.4889 86.527 85.724 87.213 0 0 0 0 0.0014755 1 46533 42.568 37.391 1 31718 2080 12041 12371 49460 49460 SLFIGEK 7 1 0 Unmodified _SLFIGEK_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.2272 2 397.226354 792.438155 101847.3 0.26886 0.0001068 0.57517 0.00022847 0.84403 0.00033527 397.226479039178 401.233773860277 54.34 0.71 54.34 54.249 54.959 -3.8147E-06 190 64 6 0 0 0 0.036324 1 30697 61.357 13.012 1 0.66261 0.74077 0 63406000 35401000 28005000 31719 1566 12042 12372 49461 49461 SLFIGEK 7 1 0 Unmodified _SLFIGEK_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.2261 2 397.226354 792.438155 97442.49 0.26806 0.00010648 0.23061 9.1603E-05 0.49867 0.00019809 397.226238582121 401.233552132317 57.736 1.0993 57.736 56.994 58.093 0 257 86 5 0 0 0 0.029647 1 33365 69.998 3.0049 1 1.0954 1.1831 0 38338000 18063000 20275000 31720 1566 12042 12372 49462 49462 SLFILGQVIK 10 1 0 Unmodified _SLFILGQVIK_ 0 0 0 A0A087X0P0;Q02224;D6RBW0 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.3613 2 559.352617 1116.69068 85656.3 0.96163 0.00053789 -0.34685 -0.00019401 0.61478 0.00034388 559.352360839026 563.359533050609 119.14 0.39558 119.14 119 119.39 0 66 25 4 0 0 0 0.0051169 1 76532 60.59 56.645 1 1.7233 1.9253 0 2415800 1037600 1378200 31721 445 12043 12373 49463 49463 SLFILGQVIK 10 1 0 Unmodified _SLFILGQVIK_ 0 0 0 A0A087X0P0;Q02224;D6RBW0 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.8622 2 559.352617 1116.69068 82878.34 0.5753 0.0003218 -0.1724 -9.643E-05 0.40291 0.00022537 559.352317309444 563.359735691006 118.63 0.41956 118.63 118.36 118.78 0 81 25 4 0 0 0 0.0041076 2 77974 61.962 61.962 1 1.513 1.6155 0 3942700 1889100 2053600 31722 445 12043 12373 49464;49465 49464 SLFILGQVIK 10 1 0 Unmodified _SLFILGQVIK_ 0 0 0 A0A087X0P0;Q02224;D6RBW0 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.3611 2 559.352617 1116.69068 83671.28 0.6088 0.00034053 -0.25681 -0.00014365 0.35199 0.00019689 559.352551674307 563.359647902936 131.42 0.37726 131.42 131.28 131.65 0 56 17 4 0 0 0 0.012458 2 79769 50.607 50.607 1 1.5017 1.305 0 1064600 328890 735740 31723 445 12043 12373 49466;49467 49466 SLFILGQVIK 10 1 0 Unmodified _SLFILGQVIK_ 0 0 0 A0A087X0P0;Q02224;D6RBW0 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.36 2 559.352617 1116.69068 81986.28 0.90227 0.00050469 -0.21616 -0.00012091 0.68611 0.00038378 559.352510987035 563.359547789891 131.18 0.45345 131.18 130.98 131.43 0 56 20 5 0 0 0 0.011541 2 78666 51.854 51.854 1 1.7269 1.516 0 1275200 486720 788510 31724 445 12043 12373 49468;49469 49468 SLFLGQK 7 1 0 Unmodified _SLFLGQK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.7417 2 396.734346 791.454139 93078.02 0.18457 7.3224E-05 -0.68395 -0.00027135 -0.49939 -0.00019812 396.734109359402 400.741212319673 54.286 1.0711 54.286 53.911 54.982 0 389 93 10 0 0 0 0.0098984 2 30339 113.08 41.063 1 1.1164 1.3672 0 3923000000 1912000000 2010900000 31725 1401 12044 12374 49470;49471 49470 SLFLGQK 7 1 0 Unmodified _SLFLGQK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.7416 2 396.734346 791.454139 94287.48 0.055359 2.1963E-05 -1.1391 -0.00045191 -1.0837 -0.00042994 396.734012726073 400.741031243366 52.814 1.1474 52.814 52.552 53.7 0 451 101 11 0 0 0 0.010245 2 30067 111.69 46.425 1 1.1321 1.3412 0 2892800000 1354100000 1538700000 31726 1401 12044 12374 49472;49473 49472 SLFLGQK 7 1 0 Unmodified _SLFLGQK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 400.7416 2 396.734346 791.454139 94241.84 0.11488 4.5578E-05 -0.12637 -5.0136E-05 -0.01149 -4.5584E-06 396.734292403796 400.741291574586 61.5 1.6486 61.5 61.019 62.667 0 672 132 9 0 0 0 0.036835 1 31415 61.123 10.584 1 1.2439 1.0872 0 179880000 84391000 95487000 31727 1401 12044 12374 49474 49474 SLFLGQK 7 1 0 Unmodified _SLFLGQK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 400.7414 2 396.734346 791.454139 94042.3 -0.14049 -5.5739E-05 -0.1912 -7.5858E-05 -0.3317 -0.0001316 396.734273766571 400.74126257757 61.695 1.7429 61.695 61.251 62.994 0 670 132 9 0 0 0 0.034046 1 30846 62.978 23.957 1 1.2163 1.0441 0 143230000 60817000 82412000 31728 1401 12044 12374 49475 49475 SLFPEGNPAK 10 1 0 Unmodified _SLFPEGNPAK_ 0 0 0 E9PDF6;B0I1S9;O43795 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.2843 2 530.277106 1058.53966 82653.4 0.47911 0.00025406 -0.02174 -1.1528E-05 0.45737 0.00024253 530.27661073862 534.28417839785 57.609 0.51078 57.609 57.38 57.891 0 133 41 5 0 0 0 0.013721 2 32491 58.981 41.595 1 1.4717 1.4977 0 14057000 5161200 8895300 31729 805 12045 12375 49476;49477 49477 SLFPEGNPAK 10 1 0 Unmodified _SLFPEGNPAK_ 0 0 0 E9PDF6;B0I1S9;O43795 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.2849 2 530.277106 1058.53966 NaN NaN NaN 0.11803 6.2586E-05 NaN NaN NaN NaN 56.571 0.50006 56.571 56.364 56.865 0 0 0 0 0.033591 1 32497 51.066 26.143 1 NaN NaN 0 6450500 0 6450500 31730 805 12045 12375 49478 49478 SLFPENLQADK 11 1 0 Unmodified _SLFPENLQADK_ 0 0 0 Q4KMR3;Q12965;H0YNQ8 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3323 2 631.324785 1260.63502 77780.81 0.79177 0.00049987 -0.89293 -0.00056373 -0.10116 -6.3866E-05 631.323936450557 635.331259107398 79.739 0.44792 79.739 79.503 79.951 0 167 35 6 0 0 0 0.0018568 2 48456 64.297 64.297 1 1.4995 1.5363 0 31854000 13523000 18331000 31731 1703 12046 12376 49479;49480 49479 SLFSSIGEVESAK 13 1 0 Unmodified _SLFSSIGEVESAK_ 0 0 0 Q15717;M0QZR9 Q15717 Q15717 ELAVL1 ELAV-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3552 2 677.348457 1352.68236 73748.27 0.79804 0.00054055 0.29226 0.00019796 1.0903 0.00073852 677.849708009221 681.35554972485 94.143 0.69622 94.143 93.728 94.424 0 150 63 5 0 0 0 9.1829E-05 1 56972 93.258 82.5 1 2.0254 2.0957 0 29224000 8453900 20770000 31732 1764 12047 12377 49481 49481 SLFSSIGEVESAK 13 1 0 Unmodified _SLFSSIGEVESAK_ 0 0 0 Q15717;M0QZR9 Q15717 Q15717 ELAVL1 ELAV-like protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3556 2 677.348457 1352.68236 NaN NaN NaN 0.043799 2.9667E-05 NaN NaN NaN NaN 93.177 0.81952 93.177 92.836 93.655 0 0 0 0 0.00062117 1 57666 80.979 56.204 1 NaN NaN 0 18018000 0 18018000 31733 1764 12047 12377 49482 49482 SLFVGHMDYK 10 1 0 Oxidation (M) _SLFVGHM(ox)DYK_ SLFVGHM(1)DYK SLFVGHM(72.64)DYK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.7893 2 606.789524 1211.56449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.311 1 40.311 39.811 40.811 0 0 0 0 0.00021076 1 21066 72.643 43.17 1 31734 1183 12048 12378 49483 49483 899 SLFVGHMDYK 10 1 0 Oxidation (M) _SLFVGHM(ox)DYK_ SLFVGHM(1)DYK SLFVGHM(66.43)DYK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.7975 2 606.789524 1211.56449 76996.41 0.33898 0.00020569 0.27528 0.00016704 0.61426 0.00037273 606.78973933477 610.796840470263 45.958 0.77214 45.958 45.742 46.514 0 316 57 8 0 0 0 0.0014628 2 22034 66.435 50.773 1 1.0957 0.87831 0 8342000 3937100 4404900 31735 1183 12048 12378 49484;49485 49484 899 SLFVVVGDR 9 0 1 Unmodified _SLFVVVGDR_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.2824 2 496.282192 990.549831 85423.86 0.39887 0.00019795 -0.16715 -8.2952E-05 0.23172 0.000115 496.281864136467 501.286353678125 87.058 0.69579 87.058 86.71 87.406 0 163 55 8 0 0 0 8.6287E-05 2 52506 110.55 70.745 1 0.96629 1.1465 0 691240000 356990000 334250000 31736 2023;1687 12049 12379 49486;49487 49487 SLFVVVGDR 9 0 1 Unmodified _SLFVVVGDR_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.2882 2 496.282192 990.549831 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.8 1 87.8 87.3 88.3 7.6294E-06 0 0 0 0.014831 1 52956 58.981 34.087 1 31737 2023;1687 12049 12379 49488 49488 SLFVVVGDR 9 0 1 Unmodified _SLFVVVGDR_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.2826 2 496.282192 990.549831 84755.04 0.4531 0.00022486 0.14318 7.1059E-05 0.59628 0.00029592 496.282041362431 501.28649970247 85.926 0.53322 85.926 85.704 86.238 0 155 41 9 0 0 0 1.2099E-06 2 52921 136.75 74.094 1 0.92315 1.0838 0 845040000 431390000 413650000 31738 2023;1687 12049 12379 49489;49490 49490 SLFVVVGDR 9 0 1 Unmodified _SLFVVVGDR_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.2825 2 496.282192 990.549831 83816.29 0.31288 0.00015528 0.23857 0.0001184 0.55145 0.00027368 496.282277074822 501.28635026635 99.43 0.80491 99.43 98.971 99.775 0 231 45 7 0 0 0 0.010363 1 56088 59.35 33.456 1 1.3556 1.1686 0 69009000 30683000 38326000 31739 2023;1687 12049 12379 49491 49491 SLFVVVGDR 9 0 1 Unmodified _SLFVVVGDR_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.2866 2 496.282192 990.549831 84225.6 0.14152 7.0233E-05 0.55816 0.00027701 0.69968 0.00034724 496.282408749164 501.286514694697 99.261 0.73642 99.261 98.836 99.572 0 238 45 7 0 0 0 0.0042207 2 55147 69.812 39.627 1 1.304 1.138 0 69634000 30531000 39103000 31740 2023;1687 12049 12379 49492;49493 49492 SLGEDVSDSGTSK 13 1 0 Unmodified _SLGEDVSDSGTSK_ 0 0 0 B2RWP5;Q96L73;Q96MN8;Q8NB95 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.2943 2 641.293879 1280.5732 NaN NaN NaN -0.016106 -1.0329E-05 NaN NaN NaN NaN 24.941 0.21889 24.941 24.831 25.05 0 0 0 0 0.020733 1 10607 47.559 36.069 1 NaN NaN 0 2752200 2752200 0 31741 898 12050 12380 49494 49494 SLGEDVSDSGTSK 13 1 0 Unmodified _SLGEDVSDSGTSK_ 0 0 0 B2RWP5;Q96L73;Q96MN8;Q8NB95 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.2939 2 641.293879 1280.5732 NaN NaN NaN -0.065473 -4.1987E-05 NaN NaN NaN NaN 24.691 0.19859 24.691 24.594 24.792 1.9073E-06 0 0 0 0.0051753 1 10396 58.676 40.365 1 NaN NaN 0 1986500 1986500 0 31742 898 12050 12380 49495 49495 SLGEIPIVESEIK 13 1 0 Unmodified _SLGEIPIVESEIK_ 0 0 0 P53618 P53618 P53618 COPB1 Coatomer subunit beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3972 2 707.395407 1412.77626 NaN NaN NaN 1.1013 0.00077908 NaN NaN NaN NaN 106.58 0.35738 106.58 106.39 106.74 7.6294E-06 0 0 0 0.00057687 1 66237 81.865 63.553 1 NaN NaN 0 4831900 4831900 0 31743 1606 12051 12381 49496 49496 SLGEIPIVESEIK 13 1 0 Unmodified _SLGEIPIVESEIK_ 0 0 0 P53618 P53618 P53618 COPB1 Coatomer subunit beta MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.8813 2 707.395407 1412.77626 74160.33 0.86022 0.00060851 -0.0010947 -7.7441E-07 0.85912 0.00060774 707.897523726447 711.401423381692 105.91 0.51107 105.91 105.63 106.14 7.6294E-06 119 39 5 0 0 0 0.016075 1 67345 57.532 57.532 1 1.8555 1.8567 0 15513000 7631200 7881500 31744 1606 12051 12381 49497 49497 SLGELGLEHFQAPLVR 16 0 1 Unmodified _SLGELGLEHFQAPLVR_ 0 0 0 Q6PK21;A0A0A0MRN5;Q05BV5;Q9NZT2;B3KMQ6;A0A087X028 Q6PK21 Q6PK21 OGFR Opioid growth factor receptor MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.3247 3 589.324699 1764.95227 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.85 1 106.85 106.35 107.35 -7.6294E-06 0 0 0 6.5991E-07 1 66449 99.566 83.072 1 31745 469 12052 12382 49498 49498 SLGHGLINK 9 1 0 Unmodified _SLGHGLINK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.7816 2 469.774534 937.534515 88736.51 0.50852 0.00023889 0.1722 8.0893E-05 0.68072 0.00031978 469.774611714806 473.781538164086 28.202 0.4391 28.202 28.059 28.498 0 121 31 8 0 0 0 1.3434E-05 2 13207 138.54 48.995 1 0.9572 1.0934 0 180710000 86215000 94494000 31746 486 12053 12383 49499;49500 49499 SLGHGLINK 9 1 0 Unmodified _SLGHGLINK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 313.8528 3 313.518781 937.534515 108539.8 0.30437 9.5425E-05 0.39086 0.00012254 0.69523 0.00021797 313.518853963611 316.190276873309 28.206 0.31131 28.206 28.079 28.39 -1.9073E-06 85 21 7 0 0 0 0.017335 2 13239 36.447 14.487 1 0.87657 0.94773 0 36410000 20107000 16303000 31747 486 12053 12383 49501;49502 49502 SLGHGLINK 9 1 0 Unmodified _SLGHGLINK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.7821 2 469.774534 937.534515 86822.7 0.045962 2.1592E-05 0.28246 0.00013269 0.32842 0.00015428 469.774546278709 473.781733621606 27.292 0.4017 27.292 27.059 27.461 0 113 20 8 0 0 0 8.384E-12 2 12538 183.9 79.691 1 0.8203 0.95122 0 217680000 115200000 102470000 31748 486 12053 12383 49503;49504 49503 SLGHGLINK 9 1 0 Unmodified _SLGHGLINK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 313.5189 3 313.518781 937.534515 107657.6 0.061803 1.9377E-05 -0.060932 -1.9103E-05 0.00087152 2.7324E-07 313.518683023342 316.190090946864 27.291 0.32885 27.291 27.132 27.461 0 74 17 6 0 0 0 0.0076952 1 12576 48.036 21.864 1 0.9065 0.99419 0 41059000 21822000 19238000 31749 486 12053 12383 49505 49505 SLGHGLINK 9 1 0 Unmodified _SLGHGLINK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.7822 2 469.774534 937.534515 88371.48 0.088406 4.1531E-05 0.12889 6.0548E-05 0.21729 0.00010208 469.774538935056 473.781596622252 31.405 0.64635 31.405 31.184 31.83 0 187 39 8 0 0 0 0.0010447 2 13197 98.009 29.222 1 1.2982 1.024 0 17805000 7639500 10165000 31750 486 12053 12383 49506;49507 49506 SLGHGLINK 9 1 0 Unmodified _SLGHGLINK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 469.7745 2 469.774534 937.534515 87417.75 0.2045 9.6071E-05 0.062209 2.9224E-05 0.26671 0.0001253 469.77451761334 473.781561161781 31.175 0.74057 31.175 30.93 31.671 1.9073E-06 163 38 7 0 0 0 2.2941E-05 2 12638 120.46 35.192 1 1.2801 1.0278 0 14355000 6539700 7815600 31751 486 12053 12383 49508;49509 49509 SLGHGLINKK 10 2 0 Unmodified _SLGHGLINKK_ 0 0 1 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.8364 2 533.822015 1065.62948 82343.98 0.096148 5.1326E-05 0.26308 0.00014044 0.35923 0.00019177 533.821936767621 541.836278698338 21.354 0.27242 21.354 21.226 21.499 0 41 11 5 0 0 0 0.016964 1 5980 53.775 24.613 1 1.2694 1.103 0 1226800 523370 703420 31752 486 12054 12384 49510 49510 SLGLLVR 7 0 1 Unmodified _SLGLLVR_ 0 0 0 Q9NUL7 Q9NUL7 Q9NUL7 DDX28 Probable ATP-dependent RNA helicase DDX28 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 379.2507 2 379.250163 756.485774 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.331 1 72.331 71.831 72.831 0 0 0 0 0.019725 1 43410 95.957 39.447 1 31753 2072 12055 12385 49511 49511 SLGLVDR 7 0 1 Unmodified _SLGLVDR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 385.2258 2 380.221603 758.428653 99052.91 0.14402 5.4759E-05 0.78364 0.00029796 0.92766 0.00035272 380.221917840005 385.225823880325 43.786 0.42959 43.786 43.534 43.964 3.8147E-06 127 37 5 0 0 0 0.029647 1 23438 69.998 20.409 1 1.1203 1.1378 0 29184000 14528000 14656000 31754 122 12056 12386 49512 49512 SLGNILQAK 9 1 0 Unmodified _SLGNILQAK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.2825 2 472.282192 942.549831 NaN NaN NaN 0.034773 1.6423E-05 NaN NaN NaN NaN 66 0.6693 66 65.738 66.407 0 0 0 0 0.0050184 1 37999 75.213 19.537 1 NaN NaN 0 17671000 17671000 0 31755 1712;1225 12057 12387 49513 49513 SLGNILQAK 9 1 0 Unmodified _SLGNILQAK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.2821 2 472.282192 942.549831 88010.96 0.11927 5.6331E-05 0.28695 0.00013552 0.40623 0.00019185 472.282145781627 476.289403196584 64.627 0.70355 64.627 64.344 65.048 0 314 62 7 0 0 0 0.0067422 2 37976 63.419 25.367 1 0.84914 0.91209 0 37424000 18955000 18469000 31756 1712;1225 12057 12387 49514;49515 49515 SLGNILQAK 9 1 0 Unmodified _SLGNILQAK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 476.2892 2 472.282192 942.549831 90553.21 0.18418 8.6983E-05 0.12805 6.0477E-05 0.31223 0.00014746 472.282336892715 476.289217256964 75.834 0.53703 75.834 75.596 76.133 0 137 36 5 0 0 0 0.016119 1 39483 54.157 9.7101 1 1.9812 1.6072 0 2815800 858140 1957600 31757 1712;1225 12057 12387 49516 49516 SLGPPQGEEDSVPR 14 0 1 Unmodified _SLGPPQGEEDSVPR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.3575 2 734.357345 1466.70014 70752.34 0.62074 0.00045585 0.44375 0.00032587 1.0645 0.00078172 734.357429830574 739.362556653972 50.131 0.74816 50.131 49.669 50.417 0 332 65 7 0 0 0 2.652E-09 2 27735 115.65 91.617 1 0.36323 0.40432 0 78984000 60137000 18848000 31758 1665 12058 12388 49517;49518 49518 SLGPPQGEEDSVPR 14 0 1 Unmodified _SLGPPQGEEDSVPR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.3646 2 734.357345 1466.70014 69412.95 0.56446 0.00041452 0.62152 0.00045642 1.186 0.00087093 734.357369027624 739.362838218129 48.963 0.58916 48.963 48.691 49.28 -3.8147E-06 279 49 10 0 0 0 3.4316E-05 3 27351 95.477 72.124 1 0.57411 0.65461 0 138430000 89111000 49318000 31759 1665 12058 12388 49519;49520;49521 49520 SLGPPQGEEDSVPR 14 0 1 Unmodified _SLGPPQGEEDSVPR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 734.3574 2 734.357345 1466.70014 70225.95 0.64092 0.00047067 0.20891 0.00015341 0.84983 0.00062408 734.357261359403 739.362845473954 58.146 1.0475 58.146 57.728 58.775 0 359 80 8 0 0 0 0.00061476 2 29505 59.57 48.812 1 0.27038 0.22536 0 22686000 17369000 5316400 31760 1665 12058 12388 49522;49523 49522 SLGPPQGEEDSVPR 14 0 1 Unmodified _SLGPPQGEEDSVPR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.3651 2 734.357345 1466.70014 69501.42 0.54952 0.00040354 0.1317 9.6714E-05 0.68122 0.00050026 734.357172754463 739.362560267788 58.788 1.0586 58.788 58.414 59.473 0 415 85 8 0 0 0 0.00095005 2 29303 57.175 43.405 1 0.25688 0.21736 0 18270000 14380000 3890900 31761 1665 12058 12388 49524;49525 49525 SLGSTAGTDITVNSVILLPK 20 1 0 Unmodified _SLGSTAGTDITVNSVILLPK_ 0 0 0 A0MNN4;Q2TAY7 A0MNN4 A0MNN4 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 998.0673 2 993.559512 1985.10447 62923.73 1.1929 0.0011852 -0.91794 -0.00091203 0.27494 0.00027317 994.060454388302 997.565388010317 118.44 0.38759 118.44 118.25 118.63 0 89 22 6 0 0 0 1.9504E-06 2 76037 70.622 70.622 1 1.272 1.3134 0 10993000 4720900 6271900 31762 642 12059 12389 49526;49527 49527 SLGSTAGTDITVNSVILLPK 20 1 0 Unmodified _SLGSTAGTDITVNSVILLPK_ 0 0 0 A0MNN4;Q2TAY7 A0MNN4 A0MNN4 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 997.5668 2 993.559512 1985.10447 62753.97 0.66223 0.00065796 -0.44814 -0.00044525 0.21409 0.00021271 994.060977264724 997.565936938843 118.02 0.38318 118.02 117.8 118.18 0 115 26 6 0 0 0 6.1805E-06 1 77444 54.276 54.276 1 1.2975 1.2978 0 15414000 6191300 9223000 31763 642 12059 12389 49528 49528 SLGSVQAPSYGAR 13 0 1 Unmodified _SLGSVQAPSYGAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8379 2 646.833308 1291.65206 74585.95 0.64184 0.00041516 0.61373 0.00039698 1.2556 0.00081215 646.833636370475 651.837835288539 51.089 1.2283 51.089 50.534 51.762 3.8147E-06 630 113 10 0 0 0 1.4574E-23 3 28003 155.11 128.16 1 1.1325 1.3409 0 389520000 186040000 203470000 31764 316 12060 12390 49529;49530;49531 49530 SLGSVQAPSYGAR 13 0 1 Unmodified _SLGSVQAPSYGAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.8344 2 646.833308 1291.65206 74019.57 1.1623 0.0007518 0.64115 0.00041472 1.8034 0.0011665 646.833624006518 651.837937329336 49.822 0.76189 49.822 49.498 50.26 -3.8147E-06 394 63 10 0 0 0 2.7945E-31 2 27966 175.15 146.1 1 1.1923 1.3966 0 700200000 327040000 373160000 31765 316 12060 12390 49532;49533 49533 SLGSVQAPSYGAR 13 0 1 Unmodified _SLGSVQAPSYGAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.8334 2 646.833308 1291.65206 74823.09 0.55264 0.00035747 -0.027402 -1.7725E-05 0.52524 0.00033974 646.833274846219 651.837372170328 59.014 1.5701 59.014 58.532 60.102 -3.8147E-06 606 116 10 0 0 0 1.3265E-18 3 30007 139.15 104.62 1 1.7055 1.4564 0 38032000 13451000 24581000 31766 316 12060 12390 49534;49535;49536 49535 SLGSVQAPSYGAR 13 0 1 Unmodified _SLGSVQAPSYGAR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.8384 2 646.833308 1291.65206 74374.27 0.53506 0.00034609 0.038098 2.4643E-05 0.57316 0.00037074 646.83338460077 651.83747740398 59.737 1.2894 59.737 59.089 60.378 0 535 98 8 0 0 0 6.5436E-06 4 30025 104.43 88.844 1 1.6445 1.4345 0 33181000 12778000 20403000 31767 316 12060 12390 49537;49538;49539;49540 49539 SLGTADVHFER 11 0 1 Unmodified _SLGTADVHFER_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.5432 3 411.207043 1230.5993 93362.66 0.1236 5.0823E-05 0.17647 7.2566E-05 0.30007 0.00012339 411.207000648002 414.54320484132 47.173 0.47334 47.173 46.99 47.463 -3.8147E-06 221 43 6 0 0 0 0.0050006 2 25510 45.915 38.787 1 1.0853 1.2011 0 61005000 28670000 32335000 31768 1229 12061 12391 49541;49542 49541 SLGTADVHFER 11 0 1 Unmodified _SLGTADVHFER_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8075 2 616.306926 1230.5993 77823.38 0.60969 0.00037575 -0.10262 -6.3245E-05 0.50707 0.00031251 616.30689038186 621.310843501763 47.19 0.41862 47.19 47.019 47.437 0 105 38 4 0 0 0 0.00060465 2 25563 73.885 60.794 1 1.0134 1.0791 0 43390000 22698000 20692000 31769 1229 12061 12391 49543;49544 49544 SLGTADVHFER 11 0 1 Unmodified _SLGTADVHFER_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.3118 2 616.306926 1230.5993 NaN NaN NaN 0.77955 0.00048044 NaN NaN NaN NaN 47.142 0.20305 47.142 46.971 47.174 0 0 0 0 4.5537E-05 1 25544 99.788 69.218 1 NaN NaN 0 27404000 0 27404000 31770 1229 12061 12391 49545 49545 SLGTADVHFER 11 0 1 Unmodified _SLGTADVHFER_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.3112 2 616.306926 1230.5993 76207.98 0.41573 0.00025621 -0.18756 -0.0001156 0.22816 0.00014062 616.307058417242 621.311288407633 45.708 0.3889 45.708 45.544 45.933 0 125 34 5 0 0 0 4.6685E-08 2 25071 121.83 107.16 1 0.84077 0.97036 0 55330000 28315000 27015000 31771 1229 12061 12391 49546;49547 49547 SLGTADVHFER 11 0 1 Unmodified _SLGTADVHFER_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.2068 3 411.207043 1230.5993 92910.97 0.16222 6.6707E-05 0.023579 9.6957E-06 0.1858 7.6403E-05 411.206903468319 414.543142832493 45.731 0.70078 45.731 45.31 46.011 3.8147E-06 248 61 8 0 0 0 0.00061224 1 25116 56.936 51.473 1 1.0386 1.1918 0 80363000 38571000 41792000 31772 1229 12061 12391 49548 49548 SLGTADVHFER 11 0 1 Unmodified _SLGTADVHFER_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.3068 2 616.306926 1230.5993 76795.94 0.48378 0.00029816 -0.60507 -0.00037291 -0.12129 -7.4751E-05 616.30670981497 621.310993417552 54.384 0.73748 54.384 54.101 54.838 0 250 53 9 0 0 0 0.0018384 1 27012 64.439 58.518 1 0.45641 0.37507 0 17516000 12227000 5289200 31773 1229 12061 12391 49549 49549 SLGTADVHFER 11 0 1 Unmodified _SLGTADVHFER_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 411.2069 3 411.207043 1230.5993 93277.27 -0.038238 -1.5724E-05 0.13851 5.6957E-05 0.10027 4.1234E-05 411.206979524698 414.543118250318 54.385 1.1859 54.385 53.924 55.11 0 368 85 9 0 0 0 0.011529 2 27026 30.004 30.004 1 0.48224 0.40358 0 24608000 16437000 8171100 31774 1229 12061 12391 49550;49551 49551 SLGTADVHFER 11 0 1 Unmodified _SLGTADVHFER_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 411.2069 3 411.207043 1230.5993 92821.27 -0.32448 -0.00013343 0.3001 0.0001234 -0.024385 -1.0027E-05 411.207143397328 414.543233724552 54.767 0.98029 54.767 54.419 55.4 3.8147E-06 359 69 9 0 0 0 0.0021053 2 26659 45.915 45.915 1 0.47443 0.40003 0 17653000 12315000 5338000 31775 1229 12061 12391 49552;49553 49552 SLGTADVHFER 11 0 1 Unmodified _SLGTADVHFER_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.3074 2 616.306926 1230.5993 77016.21 0.36175 0.00022295 0.012579 7.7525E-06 0.37433 0.0002307 616.306810669447 621.311179627738 54.749 0.77164 54.749 54.457 55.228 0 261 56 8 0 0 0 0.00082468 2 26677 73.499 63.737 1 0.46669 0.38239 0 13476000 9307400 4168800 31776 1229 12061 12391 49554;49555 49554 SLGTIQQCCDAIDHLCR 17 0 1 Unmodified _SLGTIQQCCDAIDHLCR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.9777 3 682.976648 2045.90811 74664.44 0.51565 0.00035217 -0.78954 -0.00053923 -0.27389 -0.00018706 683.310787175904 686.646389945591 74.97 0.78235 74.97 74.677 75.459 0 263 64 8 0 0 0 1.3326E-10 2 44010 111.92 111.92 1 1.0398 1.0806 0 22244000 10532000 11711000 31777 1665 12062 12392 49556;49557 49557 SLGTIQQCCDAIDHLCR 17 0 1 Unmodified _SLGTIQQCCDAIDHLCR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.3121 3 682.976648 2045.90811 73947.36 0.4415 0.00030153 -0.6267 -0.00042802 -0.18521 -0.00012649 683.310803807209 686.312697141137 73.744 1.0138 73.744 73.497 74.511 -7.6294E-06 306 85 9 0 0 0 4.0311E-07 2 44246 88.133 85.124 1 1.1934 1.2925 0 27433000 14134000 13300000 31778 1665 12062 12392 49558;49559 49558 SLGTIQQCCDAIDHLCR 17 0 1 Unmodified _SLGTIQQCCDAIDHLCR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 682.9773 3 682.976648 2045.90811 72559.63 0.53593 0.00036603 -0.48092 -0.00032846 0.05501 3.757E-05 683.311138999241 686.312169032761 86.029 0.68333 86.029 85.636 86.319 0 227 39 9 0 0 0 0.0052291 1 47079 27.271 27.271 1 0.37564 0.31678 0 9673700 6674200 2999500 31779 1665 12062 12392 49560 49560 SLGTIQQCCDAIDHLCR 17 0 1 Unmodified _SLGTIQQCCDAIDHLCR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.3112 3 682.976648 2045.90811 NaN NaN NaN -0.65778 -0.00044925 NaN NaN NaN NaN 86.193 0.48979 86.193 85.968 86.458 -7.6294E-06 0 0 0 0.00024623 1 46374 62.765 59.161 1 NaN NaN 0 6280600 6280600 0 31780 1665 12062 12392 49561 49561 SLGVDMDDKDDAHYAVQAR 19 1 1 Oxidation (M) _SLGVDM(ox)DDKDDAHYAVQAR_ SLGVDM(1)DDKDDAHYAVQAR SLGVDM(60.06)DDKDDAHYAVQAR 0 1 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.9965 3 707.988375 2120.9433 71960.69 0.38321 0.00027131 0.17294 0.00012244 0.55615 0.00039375 708.323042182284 713.996002368172 38.737 0.24722 38.737 38.57 38.817 0 95 22 6 0 0 0 5.8027E-06 1 20380 60.062 58.412 1 1.5583 1.8057 0 34792000 14928000 19863000 31781 1183 12063 12393 49562 49562 900 SLGVDMDDKDDAHYAVQAR 19 1 1 Oxidation (M) _SLGVDM(ox)DDKDDAHYAVQAR_ SLGVDM(1)DDKDDAHYAVQAR SLGVDM(54.97)DDKDDAHYAVQAR 0 1 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.7491 4 531.243101 2120.9433 82484.63 0.33519 0.00017807 -0.24926 -0.00013242 0.08593 4.565E-05 531.493933852874 535.748542930231 38.836 0.51219 38.836 38.581 39.093 0 251 44 9 0 0 0 1.1551E-05 1 20382 54.974 53.238 1 1.6454 1.8933 0 26861000 12359000 14502000 31782 1183 12063 12393 49563 49563 900 SLGVDMDDKDDAHYAVQAR 19 1 1 Unmodified _SLGVDMDDKDDAHYAVQAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.6653 3 702.656737 2104.94838 73206.3 0.38198 0.0002684 0.23466 0.00016489 0.61664 0.00043328 702.991380672244 708.664280881223 63.823 0.44713 63.823 63.586 64.033 0 158 37 6 0 0 0 0.00023433 1 32813 39.849 39.849 1 1.7529 1.4804 0 3142500 1002500 2140000 31783 1183 12063 12394 49564 49564 SLGVDMDDKDDAHYAVQAR 19 1 1 Unmodified _SLGVDMDDKDDAHYAVQAR_ 0 0 1 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.9905 3 702.656737 2104.94838 70275.45 0.30137 0.00021176 0.37278 0.00026193 0.67414 0.00047369 702.991416882869 708.664700307613 64.45 0.53541 64.45 64.221 64.757 7.6294E-06 154 45 6 0 0 0 0.032295 2 32510 19.057 17.818 1 1.6288 1.4046 0 2342100 640170 1701900 31784 1183 12063 12394 49565;49566 49566 SLGYAYVNFQQPADAER 17 0 1 Unmodified _SLGYAYVNFQQPADAER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YBN4;E5RGH3;E5RJB9;E5RH24;E5RHG7;B1ANR0;Q6IQ30;Q13310;B1ANR1 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 965.4623 2 964.960497 1927.90644 61087.07 0.73944 0.00071353 0.20685 0.0001996 0.94629 0.00091313 965.462716266213 970.466017692777 90.911 0.87167 90.911 90.533 91.405 0 437 72 9 0 0 0 2.4568E-25 2 54966 145.29 138.71 1 1.8532 2.0607 0 75317000 25134000 50183000 31785 273;818 12064 12395 49567;49568 49568 SLGYAYVNFQQPADAER 17 0 1 Unmodified _SLGYAYVNFQQPADAER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YBN4;E5RGH3;E5RJB9;E5RH24;E5RHG7;B1ANR0;Q6IQ30;Q13310;B1ANR1 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 969.9628 2 964.960497 1927.90644 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.416 1 91.416 90.916 91.916 0 0 0 0 0.00049411 1 55333 62.891 47.689 1 31786 273;818 12064 12395 49569 49569 SLGYAYVNFQQPADAER 17 0 1 Unmodified _SLGYAYVNFQQPADAER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YBN4;E5RGH3;E5RJB9;E5RH24;E5RHG7;B1ANR0;Q6IQ30;Q13310;B1ANR1 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 964.9619 2 964.960497 1927.90644 60793.49 0.68739 0.00066331 -0.094557 -9.1244E-05 0.59283 0.00057206 965.462060714204 969.963918079541 90.252 0.80188 90.252 89.867 90.669 0 458 70 8 0 0 0 1.4812E-45 3 55705 173.19 166.61 1 1.7033 1.957 0 77845000 28152000 49693000 31787 273;818 12064 12395 49570;49571;49572 49572 SLGYAYVNFQQPADAER 17 0 1 Unmodified _SLGYAYVNFQQPADAER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YBN4;E5RGH3;E5RJB9;E5RH24;E5RHG7;B1ANR0;Q6IQ30;Q13310;B1ANR1 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 965.4625 2 964.960497 1927.90644 60841.79 0.017877 1.7251E-05 0.47941 0.00046261 0.49728 0.00047986 964.961067151112 969.964845421475 104.17 0.78996 104.17 103.76 104.55 0 308 52 9 0 0 0 0.0019001 2 59184 37.594 34.886 1 1.2499 1.0212 0 14061000 6160500 7900900 31788 273;818 12064 12395 49573;49574 49574 SLGYAYVNFQQPADAER 17 0 1 Unmodified _SLGYAYVNFQQPADAER_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YBN4;E5RGH3;E5RJB9;E5RH24;E5RHG7;B1ANR0;Q6IQ30;Q13310;B1ANR1 A0A087WTT1;B1ANR0 A0A087WTT1 PABPC1;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 964.9573 2 964.960497 1927.90644 61155.98 -0.081413 -7.856E-05 0.60488 0.00058369 0.52347 0.00050513 964.961131033925 969.965128101103 104.03 0.63155 104.03 103.72 104.36 0 286 41 9 0 0 0 0.0029783 2 58505 36.284 36.284 1 1.223 1.0172 0 15541000 7333300 8207400 31789 273;818 12064 12395 49575;49576 49576 SLHDALCVIR 10 0 1 Unmodified _SLHDALCVIR_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;Q96GI1;B4DX08;Q9HB74 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 398.5492 3 395.213252 1182.61793 NaN NaN NaN 0.25364 0.00010024 NaN NaN NaN NaN 66.913 0.49904 66.913 66.757 67.256 0 0 0 0 0.038539 1 38617 35.541 0 1 NaN NaN 0 3280700 0 3280700 31790 960 12065 12396 49577 49577 SLHPIHQGITELSR 14 0 1 Unmodified _SLHPIHQGITELSR_ 0 0 0 Q4G1A1;A8K3X3;Q9H410;Q5JW53;Q5JW54;Q5JW57 Q4G1A1 Q4G1A1 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.9583 3 529.958239 1586.85289 83491.24 0.34101 0.00018072 -0.62575 -0.00033162 -0.28474 -0.0001509 530.292595713052 533.293695594278 53.216 0.41259 53.216 53.075 53.487 0 138 31 6 0 0 0 0.00049382 1 26370 52.5 52.5 1 0.99847 0.86676 0 2372800 1200200 1172600 31791 727 12066 12397 49578 49578 SLHSAGPPLLAVTAAPPAQPLAK 23 1 0 Unmodified _SLHSAGPPLLAVTAAPPAQPLAK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7;E9PIQ3;H0Y799;A0A140T9X8 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.4291 3 736.423072 2206.24739 71453.57 0.89576 0.00065966 -0.064187 -4.7269E-05 0.83157 0.00061239 736.4228864225 739.428649410004 100.43 0.63847 100.43 100.08 100.72 0 289 53 7 0 0 0 0.0010084 2 61542 28.202 28.202 1 0.62704 0.61426 0 21745000 13357000 8387900 31792 367 12067 12398 49579;49580 49580 SLHSAGPPLLAVTAAPPAQPLAK 23 1 0 Unmodified _SLHSAGPPLLAVTAAPPAQPLAK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7;E9PIQ3;H0Y799;A0A140T9X8 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.7579 3 736.423072 2206.24739 71746.59 0.79289 0.0005839 -0.22675 -0.00016699 0.56614 0.00041692 736.757430807441 739.427889844654 99.187 0.66096 99.187 98.936 99.597 0 291 56 7 0 0 0 4.0936E-08 2 62065 53.585 53.585 1 0.64923 0.66598 0 32007000 21275000 10732000 31793 367 12067 12398 49581;49582 49582 SLHSAGPPLLAVTAAPPAQPLAK 23 1 0 Unmodified _SLHSAGPPLLAVTAAPPAQPLAK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7;E9PIQ3;H0Y799;A0A140T9X8 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.0945 3 736.423072 2206.24739 70563.13 0.9293 0.00068436 -0.091646 -6.749E-05 0.83765 0.00061687 736.757318351598 739.428675386757 112.17 0.48225 112.17 111.95 112.44 0 178 27 9 0 0 0 0.00027284 2 65048 34.65 34.65 1 1.283 1.0066 0 11408000 5081600 6326800 31794 367 12067 12398 49583;49584 49583 SLHSAGPPLLAVTAAPPAQPLAK 23 1 0 Unmodified _SLHSAGPPLLAVTAAPPAQPLAK_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7;E9PIQ3;H0Y799;A0A140T9X8 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 736.4221 3 736.423072 2206.24739 71150.52 0.7036 0.00051814 -0.043019 -3.168E-05 0.66058 0.00048646 736.757311465751 739.094466564097 111.85 0.4591 111.85 111.67 112.13 0 168 24 9 0 0 0 0.00098656 2 63899 28.393 28.393 1 1.1709 0.96275 0 9960400 4256300 5704100 31795 367 12067 12398 49585;49586 49585 SLHSATTIGNK 11 1 0 Unmodified _SLHSATTIGNK_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.804 2 564.80402 1127.59349 NaN NaN NaN 0.20514 0.00011587 NaN NaN NaN NaN 19.097 0.37688 19.097 18.84 19.217 -1.9073E-06 0 0 0 0.004329 1 5785 66.299 20.619 1 NaN NaN 0 5595700 5595700 0 31796 680 12068 12399 49587 49587 SLHSATTIGNK 11 1 0 Unmodified _SLHSATTIGNK_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 376.8719 3 376.871772 1127.59349 100324.2 -0.055577 -2.0945E-05 -0.041733 -1.5728E-05 -0.09731 -3.6673E-05 376.871664077335 379.543281561059 19.117 0.18512 19.117 19.01 19.196 0 30 8 6 0 0 0 5.7113E-05 2 5587 73.887 73.887 1 0.62197 0.62743 0 13313000 8327100 4986300 31797 680 12068 12399 49588;49589 49589 SLHSATTIGNK 11 1 0 Unmodified _SLHSATTIGNK_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8043 2 564.80402 1127.59349 82629.33 0.43602 0.00024626 -0.091887 -5.1898E-05 0.34413 0.00019437 564.803887973193 568.811139076684 19.118 0.18512 19.118 19.01 19.196 0 31 8 6 0 0 0 2.9615E-10 2 5580 133.32 133.32 1 0.66004 0.67716 0 17716000 9782900 7932700 31798 680 12068 12399 49590;49591 49590 SLHSATTIGNK 11 1 0 Unmodified _SLHSATTIGNK_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.8116 2 564.80402 1127.59349 79862.94 0.090636 5.1192E-05 0.44372 0.00025061 0.53435 0.00030181 564.80430081743 568.811279428184 20.107 0.32649 20.107 19.907 20.234 0 75 15 7 0 0 0 0.032178 1 5592 37.789 37.789 1 1.5266 1.188 0 3367600 1353500 2014100 31799 680 12068 12399 49592 49592 SLHSATTIGNK 11 1 0 Unmodified _SLHSATTIGNK_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.8108 2 564.80402 1127.59349 81731.61 0.045641 2.5778E-05 0.22214 0.00012546 0.26778 0.00015124 564.804067605838 568.811187921584 19.935 0.36947 19.935 19.67 20.04 -1.9073E-06 80 13 8 0 0 0 0.038119 1 4968 36.334 36.334 1 1.5082 1.2224 0 2685800 1216400 1469400 31800 680 12068 12399 49593 49593 SLHSLVK 7 1 0 Unmodified _SLHSLVK_ 0 0 0 U5GXS2;S4R337;B3KQ45;Q5T2T1 U5GXS2 U5GXS2 MPP7 MAGUK p55 subfamily member 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 392.2394 2 392.239796 782.465038 100569.2 -0.0011931 -4.6797E-07 -0.0058963 -2.3128E-06 -0.0070894 -2.7807E-06 392.239462709695 396.246877632579 23.256 0.40857 23.256 22.994 23.402 0 42 17 5 0 0 0 0.023804 1 9160 90.706 8.4012 1 1.0554 1.065 0 7976400 4344100 3632300 31801 926 12069 12400 49594 49594 SLHSVSEER 9 0 1 Unmodified _SLHSVSEER_ 0 0 0 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2593 2 522.259445 1042.50434 84785.94 0.66183 0.00034565 -0.1237 -6.4604E-05 0.53813 0.00028104 522.25928004223 527.263449345261 16.528 0.28637 16.528 16.428 16.714 0 57 12 6 0 0 0 1.8776E-05 2 3861 119.27 87.34 1 1.0891 1.125 0 23801000 11136000 12665000 31802 1945 12070 12401 49595;49596 49596 SLHSVSEER 9 0 1 Unmodified _SLHSVSEER_ 0 0 0 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 348.5087 3 348.508722 1042.50434 101027 0.41716 0.00014538 -0.50724 -0.00017678 -0.090081 -3.1394E-05 348.508552136732 351.844444670064 16.527 0.28637 16.527 16.428 16.714 0 55 12 6 0 0 0 0.013606 1 3872 34.692 28.691 1 1.0041 1.051 0 10828000 5320600 5507000 31803 1945 12070 12401 49597 49597 SLICSISNEVPEHPCVSPVSNHVYER 26 0 1 Acetyl (Protein N-term) _(ac)SLICSISNEVPEHPCVSPVSNHVYER_ 1 0 0 Q9UMS4;F5GY56 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1018.148 3 1017.81481 3050.4226 59356.93 0.70776 0.00072037 -0.70189 -0.0007144 0.0058702 5.9748E-06 1018.14838683895 1021.81914437689 108.44 0.48016 108.44 108.18 108.66 0 285 36 11 0 0 0 1.23E-09 2 67647 50.055 50.055 1 0.89979 0.97811 0 50581000 27010000 23571000 31804 2114 12071 12402 49598;49599 49599 SLICSISNEVPEHPCVSPVSNHVYER 26 0 1 Acetyl (Protein N-term) _(ac)SLICSISNEVPEHPCVSPVSNHVYER_ 1 0 0 Q9UMS4;F5GY56 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1018.1498 3 1017.81481 3050.4226 59000.52 0.63267 0.00064394 -0.55746 -0.00056739 0.075209 7.6549E-05 1018.14898045004 1021.81902360945 119.23 0.43205 119.23 118.97 119.41 7.6294E-06 152 18 12 0 0 0 3.124E-14 2 70537 84.318 84.318 1 0.99131 0.83914 0 31214000 15829000 15385000 31805 2114 12071 12402 49600;49601 49601 SLICSISNEVPEHPCVSPVSNHVYER 26 0 1 Acetyl (Protein N-term) _(ac)SLICSISNEVPEHPCVSPVSNHVYER_ 1 0 0 Q9UMS4;F5GY56 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1021.4847 3 1017.81481 3050.4226 59506.85 0.48826 0.00049696 -0.1035 -0.00010535 0.38475 0.00039161 1018.14920785893 1021.81953567033 119.01 0.40867 119.01 118.79 119.2 0 131 15 13 0 0 0 5.2834E-13 2 69416 71.54 65.76 1 0.94728 0.82629 0 35531000 18081000 17450000 31806 2114 12071 12402 49602;49603 49602 SLIGVEYKPVSATGAEDK 18 2 0 Unmodified _SLIGVEYKPVSATGAEDK_ 0 0 1 P07814;V9GYZ6;Q3KQZ8;B4DKX5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.3138 3 621.994796 1862.96256 76532.52 0.22167 0.00013788 0.26737 0.0001663 0.48904 0.00030418 621.995082282035 627.671808473213 69.846 0.61037 69.846 69.595 70.206 0 164 55 5 0 0 0 0.020278 1 40639 31.462 31.462 1 1.8321 2.1746 0 26141000 7825800 18315000 31807 1454 12072 12403 49604 49604 SLIGVEYKPVSATGAEDK 18 2 0 Unmodified _SLIGVEYKPVSATGAEDK_ 0 0 1 P07814;V9GYZ6;Q3KQZ8;B4DKX5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3113 3 621.994796 1862.96256 75158.47 0.7479 0.00046519 0.34891 0.00021702 1.0968 0.00068221 621.995754772132 627.671955637734 68.375 0.65968 68.375 68 68.66 0 190 52 7 0 0 0 0.014225 1 40519 33.248 22.614 1 2.2179 2.5668 0 44775000 18611000 26164000 31808 1454 12072 12403 49605 49605 SLIGVEYKPVSATGAEDK 18 2 0 Unmodified _SLIGVEYKPVSATGAEDK_ 0 0 1 P07814;V9GYZ6;Q3KQZ8;B4DKX5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.3378 3 621.994796 1862.96256 76039.35 0.44619 0.00027753 -0.034542 -2.1485E-05 0.41165 0.00025604 621.994635144831 627.338135062965 79.669 0.82872 79.669 79.149 79.978 0 211 50 8 0 0 0 0.0054158 2 42958 26.474 22.571 1 1.0825 0.93442 0 4924000 2347600 2576400 31809 1454 12072 12403 49606;49607 49607 SLIINTFYSNK 11 1 0 Unmodified _SLIINTFYSNK_ 0 0 0 Q58FF6 Q58FF6 Q58FF6 HSP90AB4P Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.351 2 650.350803 1298.68705 75643.09 0.8803 0.0005725 0.1765 0.00011479 1.0568 0.00068729 650.350911985237 654.358044333701 92.75 1.0113 92.75 92.295 93.306 -7.6294E-06 398 91 6 0 0 0 1.7174E-12 2 56213 143.03 112.78 1 2.1848 2.3516 0 40582000 11144000 29438000 31810 1799 12073 12404 49608;49609 49609 SLIINTFYSNK 11 1 0 Unmodified _SLIINTFYSNK_ 0 0 0 Q58FF6 Q58FF6 Q58FF6 HSP90AB4P Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.3511 2 650.350803 1298.68705 75536.65 1.0379 0.00067499 0.21218 0.00013799 1.2501 0.00081298 650.350804292487 654.358048025309 91.709 1.2454 91.709 91.15 92.395 -7.6294E-06 429 109 7 0 0 0 9.75E-09 3 56951 123.88 95.972 1 1.706 1.9072 0 86989000 32652000 54337000 31811 1799 12073 12404 49610;49611;49612 49611 SLIINTFYSNK 11 1 0 Unmodified _SLIINTFYSNK_ 0 0 0 Q58FF6 Q58FF6 Q58FF6 HSP90AB4P Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 654.3596 2 650.350803 1298.68705 73834.23 0.77969 0.00050707 0.79026 0.00051395 1.5699 0.001021 650.851741520093 654.35887632139 105.84 0.73622 105.84 105.64 106.38 7.6294E-06 127 36 6 0 0 0 0.00099342 1 60394 70.908 51.122 1 1.2024 0.94405 0 3942300 1740100 2202100 31812 1799 12073 12404 49613 49613 SLIINTFYSNK 11 1 0 Unmodified _SLIINTFYSNK_ 0 0 0 Q58FF6 Q58FF6 Q58FF6 HSP90AB4P Putative heat shock protein HSP 90-beta 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.3588 2 650.350803 1298.68705 73355.78 0.66911 0.00043516 1.0583 0.00068825 1.7274 0.0011234 650.852123573769 654.358858508842 105.63 0.62609 105.63 105.42 106.05 -7.6294E-06 153 41 6 0 0 0 3.8072E-05 2 59394 99.815 80.544 1 1.3101 1.0609 0 4373300 1840100 2533200 31813 1799 12073 12404 49614;49615 49615 SLIPAEGTLSK 11 1 0 Unmodified _SLIPAEGTLSK_ 0 0 0 P42696 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.3262 2 558.318971 1114.62339 81422.57 0.59384 0.00033155 -0.80959 -0.00045201 -0.21575 -0.00012046 558.317357401826 562.325868056891 71.32 0.73431 71.32 71.041 71.776 -7.6294E-06 301 63 7 0 0 0 0.002424 1 41614 61.65 45.988 1 0.9643 1.0834 0 69285000 34620000 34666000 31814 1566 12074 12405 49616 49616 SLIPAEGTLSK 11 1 0 Unmodified _SLIPAEGTLSK_ 0 0 0 P42696 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.3192 2 558.318971 1114.62339 81254.6 0.54137 0.00030226 -0.11475 -6.407E-05 0.42662 0.00023819 558.318879779983 562.325907026333 69.98 0.71426 69.98 69.742 70.456 0 288 59 8 0 0 0 0.0058544 2 41699 55.461 35.783 1 1.0308 1.1586 0 73294000 31908000 41386000 31815 1566 12074 12405 49617;49618 49617 SLIPAEGTLSK 11 1 0 Unmodified _SLIPAEGTLSK_ 0 0 0 P42696 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.3196 2 558.318971 1114.62339 80722.45 0.49472 0.00027621 0.1264 7.0569E-05 0.62111 0.00034678 558.319127876347 562.325896356267 81.379 0.76422 81.379 81.13 81.894 7.6294E-06 218 45 7 0 0 0 0.0018904 2 44055 64.04 48.889 1 1.0064 0.79289 0 10932000 5398200 5534200 31816 1566 12074 12405 49619;49620 49619 SLIPAEGTLSK 11 1 0 Unmodified _SLIPAEGTLSK_ 0 0 0 P42696 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.326 2 558.318971 1114.62339 81661.23 0.60766 0.00033927 0.13723 7.662E-05 0.74489 0.00041589 558.31901581502 562.325952816583 81.555 0.77906 81.555 81.282 82.062 0 196 41 8 0 0 0 0.0068025 2 43330 53.751 38.089 1 1.0195 0.83653 0 9005700 4424300 4581400 31817 1566 12074 12405 49621;49622 49621 SLIPDIK 7 1 0 Unmodified _SLIPDIK_ 0 0 0 G3V3B0;Q69YJ6;S4R3H4;E7EQT4;Q9UKV3;B4DQZ7 G3V3B0 G3V3B0 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.2489 2 393.242004 784.469455 98451.55 0.28421 0.00011176 -0.022135 -8.7044E-06 0.26208 0.00010306 393.241839319003 397.249018903042 80.076 0.57071 80.076 79.739 80.309 0 140 47 4 0 0 0 0.037563 1 47415 60.788 16.177 1 1.2523 1.2738 0 13950000 6292100 7657900 31818 1220 12075 12406 49623 49623 SLIVDQVQK 9 1 0 Unmodified _SLIVDQVQK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.3071 2 515.300581 1028.58661 85057.38 0.57585 0.00029674 0.26812 0.00013816 0.84397 0.0004349 515.300522392164 519.307875703915 51.377 0.64123 51.377 51.132 51.773 0 100 49 3 0 0 0 0.010479 2 28450 59.245 19.244 1 1.0091 1.0255 0 13344000 7409100 5934700 31819 873 12076 12407 49624;49625 49624 SLIVEGK 7 1 0 Unmodified _SLIVEGK_ 0 0 0 B4DNW3;P35659;B4DFG0;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 373.2263 2 373.226354 744.438155 98389.48 -0.020587 -7.6834E-06 0.19206 7.168E-05 0.17147 6.3997E-05 373.226389653332 377.233434541139 36.81 1.8505 36.81 36.312 38.162 0 466 156 8 0 0 0 0.041494 1 16464 58.981 11.133 1 0.83831 0.70149 0 50785000 28299000 22486000 31820 1546;1018 12077 12408 49626 49626 SLIVEGK 7 1 0 Unmodified _SLIVEGK_ 0 0 0 B4DNW3;P35659;B4DFG0;D6R9L5 B4DNW3;P35659 P35659 DEK Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 377.2336 2 373.226354 744.438155 99593.51 -0.042212 -1.5755E-05 0.21544 8.0407E-05 0.17323 6.4653E-05 373.226351180542 377.233557442451 36.697 1.9593 36.697 36.222 38.181 0 524 167 8 0 0 0 0.062615 1 15950 49.358 9.2554 1 0.843 0.7093 0 51697000 28337000 23361000 31821 1546;1018 12077 12408 49627 49627 SLIYKPLDGEWGTNPR 16 1 1 Unmodified _SLIYKPLDGEWGTNPR_ 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.9962 3 615.987976 1844.9421 79097.8 0.35469 0.00021849 -0.24936 -0.0001536 0.10533 6.4885E-05 616.322318229095 621.995967669405 95.886 0.51141 95.886 95.647 96.159 0 146 33 7 0 0 0 0.012789 1 52968 24.918 19.014 1 1.4923 1.2719 0 3019400 1418500 1600900 31822 1942 12078 12409 49628 49628 SLLALGNVINALADSK 16 1 0 Unmodified _SLLALGNVINALADSK_ 0 0 0 B2R6H3;Q8NI77;Q4G194 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.9661 2 799.959237 1597.90392 69095.56 1.1088 0.00088697 0.0087037 6.9626E-06 1.1175 0.00089393 799.959102884383 803.966037711 132.45 0.73782 132.45 132.1 132.83 0 219 47 7 0 0 0 2.9544E-06 2 86342 90.731 90.731 1 0.736 0.72203 0 8816800 4601100 4215700 31823 842 12079 12410 49629;49630 49629 SLLALGNVINALADSK 16 1 0 Unmodified _SLLALGNVINALADSK_ 0 0 0 B2R6H3;Q8NI77;Q4G194 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.9678 2 799.959237 1597.90392 69565.89 1.0132 0.00081051 -0.13732 -0.00010985 0.87587 0.00070066 799.959147975792 803.966355917028 131.97 0.79594 131.97 131.64 132.44 0 206 52 5 0 0 0 1.8884E-06 2 88313 94.122 94.122 1 0.7845 0.80627 0 9512900 5873800 3639100 31824 842 12079 12410 49631;49632 49632 SLLAWQSLR 9 0 1 Unmodified _SLLAWQSLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.3087 2 537.308741 1072.60293 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.735 1 95.735 95.235 96.235 0 0 0 0 0.0056247 1 59634 67.897 26.868 1 31825 1754 12080 12411 49633 49633 SLLAWQSLR 9 0 1 Unmodified _SLLAWQSLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.3093 2 537.308741 1072.60293 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.771 1 95.771 95.271 96.271 0 0 0 0 0.015885 1 59661 57.96 22.08 1 31826 1754 12080 12411 49634 49634 SLLAWQSLR 9 0 1 Unmodified _SLLAWQSLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.3123 2 537.308741 1072.60293 NaN NaN NaN -0.78766 -0.00042322 NaN NaN NaN NaN 109.79 0.44168 109.79 109.55 109.99 0 0 0 0 0.011808 1 63318 65.305 16.802 1 NaN NaN 0 1024700 0 1024700 31827 1754 12080 12411 49635 49635 SLLCHLPR 8 0 1 Unmodified _SLLCHLPR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.2818 2 498.276386 994.53822 NaN NaN NaN -1.0699 -0.00053309 NaN NaN NaN NaN 51.604 0.41914 51.604 51.365 51.784 3.8147E-06 0 0 0 0.020574 1 28492 65.038 19.32 1 NaN NaN 0 19248000 0 19248000 31828 2081 12081 12412 49636 49636 SLLCHLPR 8 0 1 Unmodified _SLLCHLPR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.276 2 498.276386 994.53822 86478.34 0.34209 0.00017045 -0.14144 -7.0478E-05 0.20064 9.9975E-05 498.276271606412 503.280479945766 57.821 0.76894 57.821 57.556 58.325 0 183 58 5 0 0 0 0.028279 1 29322 53.351 14.545 1 1.2593 1.0531 0 3827200 1584300 2242900 31829 2081 12081 12412 49637 49637 SLLCHLPR 8 0 1 Unmodified _SLLCHLPR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.2763 2 498.276386 994.53822 86955.13 0.19262 9.5977E-05 -0.22651 -0.00011286 -0.033891 -1.6887E-05 498.276071837558 503.280545721391 57.695 0.63067 57.695 57.485 58.116 0 146 45 5 0 0 0 0.038748 2 28590 47.849 17.663 1 1.4579 1.2894 0 4035900 1908800 2127100 31830 2081 12081 12412 49638;49639 49639 SLLDGNIDSSQYEDSLR 17 0 1 Unmodified _SLLDGNIDSSQYEDSLR_ 0 0 0 Q96ST3;B3KQE3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.4485 2 956.450159 1910.88576 NaN NaN NaN -0.37354 -0.00035727 NaN NaN NaN NaN 96.996 0.44667 96.996 96.797 97.244 0 0 0 0 0.009406 1 59074 43.991 35.262 1 NaN NaN 0 5906700 5906700 0 31831 1990 12082 12413 49640 49640 SLLDGNIDSSQYEDSLR 17 0 1 Unmodified _SLLDGNIDSSQYEDSLR_ 0 0 0 Q96ST3;B3KQE3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.4518 2 956.450159 1910.88576 62176.3 0.65237 0.00062396 -0.10711 -0.00010244 0.54526 0.00052152 956.951146564489 961.454866781267 96.423 0.46366 96.423 96.267 96.731 0 106 40 5 0 0 0 2.4721E-07 1 60083 97.86 92.476 1 0.61999 0.62204 0 11244000 6774300 4469700 31832 1990 12082 12413 49641 49641 SLLDGNIDSSQYEDSLR 17 0 1 Unmodified _SLLDGNIDSSQYEDSLR_ 0 0 0 Q96ST3;B3KQE3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 961.4554 2 956.450159 1910.88576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.518 1 96.518 96.018 97.018 0 0 0 0 0.00012321 1 60198 79.875 70.442 1 31833 1990 12082 12413 49642 49642 SLLEGEGSSGGGGR 14 0 1 Unmodified _SLLEGEGSSGGGGR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.8029 2 631.802205 1261.58986 NaN NaN NaN -0.27589 -0.00017431 NaN NaN NaN NaN 30.349 0.60065 30.349 30.152 30.752 0 0 0 0 3.1263E-22 1 14752 136.48 112.32 1 NaN NaN 0 219400000 219400000 0 + 31834 1161 12083 12414 49643 49643 SLLEGEGSSGGGGR 14 0 1 Unmodified _SLLEGEGSSGGGGR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.803 2 631.802205 1261.58986 NaN NaN NaN -0.12847 -8.1168E-05 NaN NaN NaN NaN 29.863 0.47736 29.863 29.7 30.177 0 0 0 0 2.9932E-42 1 14480 163.12 124.82 1 NaN NaN 0 333230000 333230000 0 + 31835 1161 12083 12414 49644 49644 SLLEGEGSSGGGGR 14 0 1 Unmodified _SLLEGEGSSGGGGR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.803 2 631.802205 1261.58986 NaN NaN NaN -0.33609 -0.00021234 NaN NaN NaN NaN 34.098 1.0312 34.098 33.887 34.918 0 0 0 0 0.00011636 1 14981 88.596 67.695 1 NaN NaN 0 86101000 86101000 0 + 31836 1161 12083 12414 49645 49645 SLLEGEGSSGGGGR 14 0 1 Unmodified _SLLEGEGSSGGGGR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.8022 2 631.802205 1261.58986 NaN NaN NaN -0.60807 -0.00038418 NaN NaN NaN NaN 34.269 0.91188 34.269 33.996 34.907 0 0 0 0 1.7105E-06 1 14572 101.95 81.053 1 NaN NaN 0 71320000 71320000 0 + 31837 1161 12083 12414 49646 49646 SLLELHK 7 1 0 Unmodified _SLLELHK_ 0 0 0 P53350;B2R841;B4E083;Q58A51 P53350 P53350 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 424.2592 2 420.252903 838.491253 95001.62 0.27459 0.0001154 -2.215 -0.00093086 -1.9404 -0.00081546 420.251994433894 424.259675829061 40.297 0.37045 40.297 40.134 40.505 -3.8147E-06 175 31 8 0 0 0 0.028306 1 21463 72.138 18.584 1 1.3539 1.5308 0 131930000 56138000 75787000 31838 1604 12084 12415 49647 49647 SLLESTYQR 9 0 1 Unmodified _SLLESTYQR_ 0 0 0 Q96ST3;B3KQE3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.7858 2 548.785296 1095.55604 83136.86 0.54018 0.00029644 0.10893 5.9779E-05 0.64911 0.00035622 548.785707261231 553.789654230727 46.906 0.68908 46.906 46.537 47.226 0 202 60 5 0 0 0 0.025003 1 25981 48.036 10.487 1 1.5818 1.7331 0 31323000 13264000 18059000 31839 1990 12085 12416 49648 49648 SLLFVNTLER 10 0 1 Unmodified _SLLFVNTLER_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3182 2 596.340238 1190.66592 NaN NaN NaN -0.47544 -0.00028353 NaN NaN NaN NaN 104.33 0.82383 104.33 103.97 104.79 0 0 0 0 0.016555 1 64754 56.563 19.087 1 NaN NaN 0 18148000 0 18148000 31840 2081 12086 12417 49649 49649 SLLGIDTEDAIQGR 14 0 1 Unmodified _SLLGIDTEDAIQGR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3895 2 744.388645 1486.76274 NaN NaN NaN -0.15305 -0.00011393 NaN NaN NaN NaN 96.559 0.72229 96.559 96.11 96.832 -7.6294E-06 0 0 0 2.0603E-05 2 58901 112.13 84.354 1 NaN NaN 0 14862000 14862000 0 31841 1581 12087 12418 49650;49651 49651 SLLGMLSDLQVYK 13 1 0 Oxidation (M) _SLLGM(ox)LSDLQVYK_ SLLGM(1)LSDLQVYK SLLGM(106.62)LSDLQVYK 0 1 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 745.9039 2 741.89726 1481.77997 NaN NaN NaN -0.62703 -0.00046519 NaN NaN NaN NaN 116.62 0.42245 116.62 116.48 116.9 7.6294E-06 0 0 0 2.7703E-09 1 74545 106.62 81.401 1 NaN NaN 0 6270500 0 6270500 31842 1718 12088 12419 49652 49652 1553 SLLGMLSDLQVYK 13 1 0 Oxidation (M) _SLLGM(ox)LSDLQVYK_ SLLGM(1)LSDLQVYK SLLGM(100.88)LSDLQVYK 0 1 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8975 2 741.89726 1481.77997 NaN NaN NaN -1.4673 -0.0010886 NaN NaN NaN NaN 117.59 0.43324 117.59 117.39 117.83 0 0 0 0 2.0475E-06 1 75244 100.88 70.314 1 NaN NaN 0 6434200 6434200 0 31843 1718 12088 12419 49653 49653 1553 SLLGMLSDLQVYK 13 1 0 Oxidation (M) _SLLGM(ox)LSDLQVYK_ SLLGM(1)LSDLQVYK SLLGM(48.28)LSDLQVYK 0 1 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8997 2 741.89726 1481.77997 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.7 1 116.7 116.2 117.2 0 0 0 0 0.0086803 1 74558 48.284 22.625 1 31844 1718 12088 12419 49654 49654 1553 SLLGMLSDLQVYK 13 1 0 Oxidation (M) _SLLGM(ox)LSDLQVYK_ SLLGM(1)LSDLQVYK SLLGM(141.95)LSDLQVYK 0 1 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.8989 2 741.89726 1481.77997 70733.56 0.7719 0.00057267 -0.57649 -0.00042769 0.19541 0.00014498 741.897205062433 745.904498093131 117.12 0.4268 117.12 116.88 117.31 0 110 25 7 0 0 0 4.85E-19 2 76687 141.95 141.95 1 0.9815 1.021 0 24570000 12993000 11577000 31845 1718 12088 12419 49655;49656 49655 1553 SLLGMLSDLQVYK 13 1 0 Oxidation (M) _SLLGM(ox)LSDLQVYK_ SLLGM(1)LSDLQVYK SLLGM(87.57)LSDLQVYK 0 1 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.9048 2 741.89726 1481.77997 NaN NaN NaN -0.64103 -0.00047558 NaN NaN NaN NaN 116.11 0.4445 116.11 115.9 116.34 0 0 0 0 9.0834E-05 1 76004 87.568 67.806 1 NaN NaN 0 6220200 0 6220200 31846 1718 12088 12419 49657 49657 1553 SLLGMLSDLQVYK 13 1 0 Oxidation (M) _SLLGM(ox)LSDLQVYK_ SLLGM(1)LSDLQVYK SLLGM(106.62)LSDLQVYK 0 1 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.8991 2 741.89726 1481.77997 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.14 1 116.14 115.64 116.64 7.6294E-06 0 0 0 1.6335E-07 1 75930 106.62 80.68 1 31847 1718 12088 12419 49658 49658 1553 SLLGMLSDLQVYK 13 1 0 Oxidation (M) _SLLGM(ox)LSDLQVYK_ SLLGM(1)LSDLQVYK SLLGM(57.84)LSDLQVYK 0 1 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 746.4066 2 741.89726 1481.77997 70504.58 0.8235 0.00061095 0.19067 0.00014146 1.0142 0.00075241 741.897554412076 745.904682099707 129.88 0.43294 129.88 129.65 130.08 0 72 19 6 0 0 0 0.00069583 1 78612 57.836 57.836 1 0.61738 0.4887 0 3030700 1725000 1305700 31848 1718 12088 12419 49659 49659 1553 SLLGMLSDLQVYK 13 1 0 Oxidation (M) _SLLGM(ox)LSDLQVYK_ SLLGM(1)LSDLQVYK SLLGM(48)LSDLQVYK 0 1 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.8979 2 741.89726 1481.77997 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.76 1 128.76 128.26 129.26 0 0 0 0 0.0088729 1 77813 48.004 19.605 1 31849 1718 12088 12419 49660 49660 1553 SLLGMLSDLQVYK 13 1 0 Oxidation (M) _SLLGM(ox)LSDLQVYK_ SLLGM(1)LSDLQVYK SLLGM(46.71)LSDLQVYK 0 1 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 745.9064 2 741.89726 1481.77997 70812.67 1.0631 0.00078872 0.61319 0.00045492 1.6763 0.0012436 741.897474065983 745.904852690136 129.75 0.34428 129.75 129.52 129.86 1.5259E-05 46 12 6 0 0 0 0.0029001 1 77618 46.706 46.706 1 0.66379 0.5153 0 2169100 1275800 893300 31850 1718 12088 12419 49661 49661 1553 SLLGPYLVFMASTINGYEGTGR 22 0 1 Oxidation (M) _SLLGPYLVFM(ox)ASTINGYEGTGR_ SLLGPYLVFM(1)ASTINGYEGTGR SLLGPYLVFM(55.89)ASTINGYEGTGR 0 1 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1187.0947 2 1181.59102 2361.16748 NaN NaN NaN -0.18633 -0.00022016 NaN NaN NaN NaN 127.66 0.46205 127.66 127.46 127.92 0 0 0 0 1.4513E-06 2 83166 55.885 43.259 1 NaN NaN 0 9267900 0 9267900 31851 2023;1687 12089 12420 49662;49663 49663 1505 SLLGPYLVFMASTINGYEGTGR 22 0 1 Oxidation (M) _SLLGPYLVFM(ox)ASTINGYEGTGR_ SLLGPYLVFM(1)ASTINGYEGTGR SLLGPYLVFM(48.82)ASTINGYEGTGR 0 1 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1181.588 2 1181.59102 2361.16748 NaN NaN NaN -1.4993 -0.0017716 NaN NaN NaN NaN 127.66 0.41726 127.66 127.49 127.9 7.6294E-06 0 0 0 6.5908E-05 1 83188 48.823 42.525 1 NaN NaN 0 5068600 5068600 0 31852 2023;1687 12089 12420 49664 49664 1505 SLLGPYLVFMASTINGYEGTGR 22 0 1 Oxidation (M) _SLLGPYLVFM(ox)ASTINGYEGTGR_ SLLGPYLVFM(1)ASTINGYEGTGR SLLGPYLVFM(79.02)ASTINGYEGTGR 0 1 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1187.0981 2 1181.59102 2361.16748 NaN NaN NaN 0.14561 0.00017206 NaN NaN NaN NaN 127.33 0.45871 127.33 127.12 127.58 0 0 0 0 6.1786E-10 1 84979 79.022 67.045 1 NaN NaN 0 11200000 0 11200000 31853 2023;1687 12089 12420 49665 49665 1505 SLLGPYLVFMASTINGYEGTGR 22 0 1 Oxidation (M) _SLLGPYLVFM(ox)ASTINGYEGTGR_ SLLGPYLVFM(1)ASTINGYEGTGR SLLGPYLVFM(51.77)ASTINGYEGTGR 0 1 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1182.0896 2 1181.59102 2361.16748 NaN NaN NaN -2.0983 -0.0024794 NaN NaN NaN NaN 127.35 0.39417 127.35 127.12 127.52 7.6294E-06 0 0 0 3.6008E-05 1 85036 51.771 44.569 1 NaN NaN 0 4574100 4574100 0 31854 2023;1687 12089 12420 49666 49666 1505 SLLIDFFR 8 0 1 Unmodified _SLLIDFFR_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.7873 2 505.78711 1009.55967 85658.55 0.58247 0.0002946 -0.26697 -0.00013503 0.3155 0.00015958 505.786955435248 510.790975866746 123.67 0.89671 123.67 123.3 124.2 0 283 63 7 0 0 0 0.0087497 2 80064 77.282 37.179 1 0.90283 0.92812 0 36434000 18142000 18292000 31855 773 12090 12421 49667;49668 49668 SLLIDFFR 8 0 1 Unmodified _SLLIDFFR_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.7914 2 505.78711 1009.55967 85847.5 0.82202 0.00041577 -0.32899 -0.0001664 0.49303 0.00024937 505.786944073222 510.790928042049 122.97 0.90388 122.97 122.7 123.61 0 318 67 8 0 0 0 0.024726 2 81511 55.676 35.131 1 0.92161 1.0662 0 68253000 33274000 34980000 31856 773 12090 12421 49669;49670 49669 SLLIDFFR 8 0 1 Unmodified _SLLIDFFR_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.7914 2 505.78711 1009.55967 84916.39 0.55814 0.0002823 -0.36626 -0.00018525 0.19188 9.7052E-05 505.786906596382 510.790821580166 134.67 0.2438 134.67 134.56 134.8 0 17 5 6 0 0 0 0.040852 1 82358 47.082 24.062 1 1.0315 0.84337 0 13763000 6449400 7313700 31857 773 12090 12421 49671 49671 SLLIDFFR 8 0 1 Unmodified _SLLIDFFR_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.7876 2 505.78711 1009.55967 86946.43 0.53784 0.00027203 0.12168 6.1544E-05 0.65952 0.00033358 505.787236307664 510.791127795217 134.57 0.19067 134.57 134.47 134.66 0 21 5 6 0 0 0 0.011932 2 81356 68.787 45.767 1 1.1227 0.94527 0 17416000 8135700 9280600 31858 773 12090 12421 49672;49673 49673 SLLINAVEASCIR 13 0 1 Unmodified _SLLINAVEASCIR_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;Q8TBX0;J3QKT4;E2QRB3;E7D7Y0;A0A1B2JLU7;B7Z8T1;B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36;J3KR12;B4DQK8 Q2TU78;B3KMB7 Q2TU78 PIG45;PYCR1;PYCR2;P5CR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.4003 2 723.392676 1444.7708 74507.11 0.93058 0.00067318 -1.2207 -0.00088302 -0.29008 -0.00020984 723.391917466458 728.395996436211 101.8 0.76439 101.8 101.38 102.15 0 174 59 5 0 0 0 0.0049783 1 62823 47.844 37.612 1 1.0718 1.0981 0 10063000 4234800 5828100 31859 259;137 12091 12422 49674 49674 SLLINAVEASCIR 13 0 1 Unmodified _SLLINAVEASCIR_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;Q8TBX0;J3QKT4;E2QRB3;E7D7Y0;A0A1B2JLU7;B7Z8T1;B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36;J3KR12;B4DQK8 Q2TU78;B3KMB7 Q2TU78 PIG45;PYCR1;PYCR2;P5CR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.392 2 723.392676 1444.7708 73488.07 0.61723 0.0004465 -0.84852 -0.00061381 -0.23129 -0.00016731 723.392128452313 728.39638676594 101.14 0.74434 101.14 100.62 101.37 0 199 57 5 0 0 0 0.001556 2 63773 57.348 57.348 1 1.1138 1.1396 0 20892000 10649000 10242000 31860 259;137 12091 12422 49675;49676 49676 SLLINAVEASCIR 13 0 1 Unmodified _SLLINAVEASCIR_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;Q8TBX0;J3QKT4;E2QRB3;E7D7Y0;A0A1B2JLU7;B7Z8T1;B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36;J3KR12;B4DQK8 Q2TU78;B3KMB7 Q2TU78 PIG45;PYCR1;PYCR2;P5CR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.3934 2 723.392676 1444.7708 73816.55 1.0857 0.00078537 0.030965 2.24E-05 1.1166 0.00080777 723.392968044001 728.897941044322 114.31 0.526 114.31 114.02 114.55 0 85 22 6 0 0 0 0.00011891 2 66775 76.655 76.655 1 0.41295 0.3453 0 3724900 2177700 1547200 31861 259;137 12091 12422 49677;49678 49678 SLLINAVEASCIR 13 0 1 Unmodified _SLLINAVEASCIR_ 0 0 0 Q2TU78;E7D7X9;A0A024R8U9;P32322;Q8TBX0;J3QKT4;E2QRB3;E7D7Y0;A0A1B2JLU7;B7Z8T1;B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36;J3KR12;B4DQK8 Q2TU78;B3KMB7 Q2TU78 PIG45;PYCR1;PYCR2;P5CR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.8947 2 723.392676 1444.7708 74836.24 0.78249 0.00056605 0.2991 0.00021637 1.0816 0.00078242 723.392720758435 728.397246546892 114.13 0.49397 114.13 113.86 114.35 0 80 19 7 0 0 0 0.00013647 2 65715 89.548 89.548 1 0.32097 0.28267 0 3636700 2512800 1123900 31862 259;137 12091 12422 49679;49680 49680 SLLIPYLDNLVK 12 1 0 Unmodified _SLLIPYLDNLVK_ 0 0 0 A0A024RDY0;H0Y8C6;O00410;B4E0R6;B3KWG6 A0A024RDY0 A0A024RDY0 RANBP5;IPO5 Importin-5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.415 2 694.413403 1386.81225 75042.43 0.93115 0.00064661 0.063658 4.4205E-05 0.99481 0.00069081 694.413398323328 698.420472433474 130.21 0.54359 130.21 130.05 130.6 0 121 34 5 0 0 0 0.013411 2 84962 44.318 40.617 1 1.643 1.7184 0 3953600 1920500 2033100 31863 394 12092 12423 49681;49682 49682 SLLNEIESIYDER 13 0 1 Unmodified _SLLNEIESIYDER_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.8995 2 790.89376 1579.77297 70238.63 0.74132 0.0005863 -0.16095 -0.0001273 0.58037 0.00045901 790.893934451132 795.897641299527 122.21 0.43863 122.21 121.99 122.43 0 137 30 7 0 0 0 0.0013287 3 79100 58.274 58.274 1 0.71671 0.74938 0 10722000 6364300 4357600 31864 1990 12093 12424 49683;49684;49685 49685 SLLNEIESIYDER 13 0 1 Unmodified _SLLNEIESIYDER_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.8939 2 790.89376 1579.77297 70102.45 0.73307 0.00057978 -0.078206 -6.1852E-05 0.65486 0.00051793 791.395847028019 795.897788825698 121.69 0.52345 121.69 121.42 121.95 0 157 38 7 0 0 0 8.0593E-05 2 80607 94.191 87.218 1 0.78858 0.78958 0 11374000 6810300 4564000 31865 1990 12093 12424 49686;49687 49687 SLLNEIESIYDER 13 0 1 Unmodified _SLLNEIESIYDER_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.4183 2 790.89376 1579.77297 66298.76 0.84581 0.00066894 -0.23649 -0.00018704 0.60931 0.0004819 791.395481963343 795.897260095831 134.37 0.15619 134.37 134.32 134.47 0 18 5 5 0 0 0 0.0012084 1 81146 76.655 76.655 1 0.88081 0.73145 0 5876400 2055600 3820900 31866 1990 12093 12424 49688 49688 SLLNLLSSQEEDFNSK 16 1 0 Unmodified _SLLNLLSSQEEDFNSK_ 0 0 0 B7ZMF2;Q9NVI1;H3BP78;F8W7R3;B3KNW8 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.9575 2 912.454713 1822.89487 63767.29 0.81967 0.00074791 0.81436 0.00074307 1.634 0.001491 912.455694478788 916.462234665198 115.8 0.41733 115.8 115.69 116.1 0 82 25 4 0 0 0 0.00025817 1 73827 57.175 50.942 1 0.9096 0.90518 0 8004800 4036200 3968600 31867 1116 12094 12425 49689 49689 SLLNLLSSQEEDFNSK 16 1 0 Unmodified _SLLNLLSSQEEDFNSK_ 0 0 0 B7ZMF2;Q9NVI1;H3BP78;F8W7R3;B3KNW8 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 912.4548 2 912.454713 1822.89487 65290.66 0.72441 0.000661 -0.080217 -7.3195E-05 0.6442 0.0005878 912.455242408249 916.461047543645 115.35 0.39682 115.35 115.14 115.53 0 72 25 5 0 0 0 2.7019E-05 1 75242 85.522 85.522 1 0.90704 0.95031 0 10793000 5008400 5784600 31868 1116 12094 12425 49690 49690 SLLNLLSSQEEDFNSK 16 1 0 Unmodified _SLLNLLSSQEEDFNSK_ 0 0 0 B7ZMF2;Q9NVI1;H3BP78;F8W7R3;B3KNW8 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 912.9562 2 912.454713 1822.89487 65764.81 0.68069 0.0006211 0.078677 7.1789E-05 0.75937 0.00069289 912.455239518683 916.461485258534 127.67 0.57557 127.67 127.51 128.09 0 65 21 6 0 0 0 0.00072871 1 77011 48.229 48.229 1 0.95938 0.81117 0 2077300 1084400 992870 31869 1116 12094 12425 49691 49691 SLLNLLSSQEEDFNSK 16 1 0 Unmodified _SLLNLLSSQEEDFNSK_ 0 0 0 B7ZMF2;Q9NVI1;H3BP78;F8W7R3;B3KNW8 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 916.9643 2 912.454713 1822.89487 65100.63 0.57585 0.00052544 0.30696 0.00028009 0.88281 0.00080553 912.956271088925 916.963763047155 127.5 0.34762 127.5 127.33 127.68 -7.6294E-06 75 14 7 0 0 0 0.024776 1 75956 26.359 26.359 1 0.88418 0.70372 0 3106500 1516800 1589700 31870 1116 12094 12425 49692 49692 SLLPDFLQTPK 11 1 0 Unmodified _SLLPDFLQTPK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8629 2 629.855721 1257.69689 76961.42 0.98122 0.00061803 0.14482 9.1217E-05 1.126 0.00070925 629.855666378008 633.862675505732 115.85 0.45174 115.85 115.65 116.1 7.6294E-06 115 28 5 0 0 0 0.0018904 2 73832 64.04 64.04 1 0.62591 0.61637 0 8596400 4839600 3756800 31871 873 12095 12426 49693;49694 49694 SLLPDFLQTPK 11 1 0 Unmodified _SLLPDFLQTPK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.8561 2 629.855721 1257.69689 78559.52 0.77307 0.00048692 0.35397 0.00022295 1.127 0.00070987 629.855692705849 633.86307209457 115.33 0.4592 115.33 115.06 115.52 0 110 30 6 0 0 0 0.0070376 1 75053 53.327 53.327 1 0.59502 0.60498 0 9163000 5097200 4065800 31872 873 12095 12426 49695 49695 SLLPDFLQTPK 11 1 0 Unmodified _SLLPDFLQTPK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.3583 2 629.855721 1257.69689 78412.58 0.54924 0.00034594 0.82048 0.00051678 1.3697 0.00086273 629.85603674945 633.863216844777 127.41 0.53682 127.41 127.14 127.68 0 76 21 5 0 0 0 0.051215 1 76747 34.532 34.532 1 1.7697 1.4915 0 2118900 862600 1256300 31873 873 12095 12426 49696 49696 SLLPDFLQTPK 11 1 0 Unmodified _SLLPDFLQTPK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 629.8566 2 629.855721 1257.69689 76429.91 0.6877 0.00043315 0.37961 0.0002391 1.0673 0.00067226 629.855808980445 633.862990865292 127.17 0.47631 127.17 126.97 127.45 -7.6294E-06 78 19 6 0 0 0 0.046186 2 75720 35.224 35.224 1 1.731 1.3552 0 2237300 810990 1426400 31874 873 12095 12426 49697;49698 49697 SLLPLSTSLDHR 12 0 1 Unmodified _SLLPLSTSLDHR_ 0 0 0 B7ZLC9;Q8TEQ6 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.9174 3 446.917381 1337.73031 92471.01 0.041645 1.8612E-05 0.31133 0.00013914 0.35297 0.00015775 446.917333241118 450.25360377878 83.136 0.48679 83.136 82.882 83.369 0 101 36 4 0 0 0 0.026613 2 50931 26.659 20.028 1 1.4632 1.4518 0 15939000 5255600 10683000 31875 1114 12096 12427 49699;49700 49700 SLLPVKPVEIEIETPEQAK 19 2 0 Unmodified _SLLPVKPVEIEIETPEQAK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0;D2CPK1;E7EUB5 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.7434 3 707.399822 2119.17764 72558.38 0.84016 0.00059433 -0.23077 -0.00016325 0.60939 0.00043108 707.733945511217 712.742561551765 107.66 0.46786 107.66 107.47 107.94 0 163 33 7 0 0 0 1.4654E-08 2 67050 74.953 74.953 1 0.6676 0.7882 0 46740000 28466000 18274000 31876 118 12097 12428 49701;49702 49702 SLLPVKPVEIEIETPEQAK 19 2 0 Unmodified _SLLPVKPVEIEIETPEQAK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0;D2CPK1;E7EUB5 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.0778 3 707.399822 2119.17764 73448.98 0.70406 0.00049805 -0.098626 -6.9768E-05 0.60544 0.00042829 707.733977487185 712.742584146901 106.9 0.49276 106.9 106.67 107.16 0 185 34 8 0 0 0 3.3567E-23 2 68131 105.77 105.77 1 0.64113 0.73956 0 29279000 17859000 11420000 31877 118 12097 12428 49703;49704 49704 SLLPVKPVEIEIETPEQAK 19 2 0 Unmodified _SLLPVKPVEIEIETPEQAK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0;D2CPK1;E7EUB5 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.0776 3 707.399822 2119.17764 72213.7 0.90327 0.00063897 -0.17885 -0.00012652 0.72442 0.00051246 707.73405292717 712.742482320262 118.41 0.64459 118.41 118.02 118.67 7.6294E-06 139 25 11 0 0 0 1.8891E-30 2 69899 112.56 112.56 1 0.91697 0.78227 0 17974000 9016600 8957800 31878 118 12097 12428 49705;49706 49706 SLLPVKPVEIEIETPEQAK 19 2 0 Unmodified _SLLPVKPVEIEIETPEQAK_ 0 0 1 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0;D2CPK1;E7EUB5 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 707.7341 3 707.399822 2119.17764 73364.88 0.60846 0.00043043 0.064671 4.5748E-05 0.67313 0.00047617 707.734178267917 712.742679163389 118.13 0.53854 118.13 117.91 118.45 -7.6294E-06 114 23 10 0 0 0 3.0328E-12 2 68786 83.213 83.213 1 0.92253 0.78042 0 13411000 6613000 6797900 31879 118 12097 12428 49707;49708 49708 SLLQALNEVK 10 1 0 Unmodified _SLLQALNEVK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.8266 2 557.826963 1113.63937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.117 1 96.117 95.617 96.617 0 0 0 0 0.03595 1 58533 48.423 12.979 1 31880 1729 12098 12429 49709 49709 SLLQQLENVTK 11 1 0 Unmodified _SLLQQLENVTK_ 0 0 0 H0Y612;A0A024R0F6;Q9UPN9 H0Y612 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.8694 2 636.861534 1271.70852 79569.58 0.78454 0.00049965 -0.0069745 -4.4418E-06 0.77757 0.0004952 636.861570279476 640.868643973732 106.44 0.50406 106.44 106.18 106.69 0 110 36 5 0 0 0 0.00026127 1 66082 90.15 71.047 1 1.7144 1.7123 0 7801200 2836400 4964800 31881 45 12099 12430 49710 49710 SLLQQLENVTK 11 1 0 Unmodified _SLLQQLENVTK_ 0 0 0 H0Y612;A0A024R0F6;Q9UPN9 H0Y612 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8624 2 636.861534 1271.70852 79603.55 0.6626 0.00042199 0.1295 8.2473E-05 0.7921 0.00050446 636.861602598368 640.868796346295 105.72 0.58234 105.72 105.42 106.01 0 105 41 4 0 0 0 0.00040176 2 67232 81.338 56.462 1 1.6541 1.6931 0 9378700 4156400 5222200 31882 45 12099 12430 49711;49712 49712 SLLQQLENVTK 11 1 0 Unmodified _SLLQQLENVTK_ 0 0 0 H0Y612;A0A024R0F6;Q9UPN9 H0Y612 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.8694 2 636.861534 1271.70852 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.59 1 118.59 118.09 119.09 -7.6294E-06 0 0 0 0.00070761 1 70069 72.243 30.591 1 31883 45 12099 12430 49713 49713 SLLSAEEAAK 10 1 0 Unmodified _SLLSAEEAAK_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.7762 2 509.774396 1017.53424 84342.22 0.67403 0.00034361 0.10869 5.5405E-05 0.78272 0.00039901 509.774294709185 513.781591083652 45.311 0.65798 45.311 44.955 45.613 0 201 57 6 0 0 0 0.0035438 1 24295 64.04 46.055 1 1.535 1.6661 0 45821000 15643000 30178000 31884 618 12100 12431 49714 49714 SLLSAEEAAK 10 1 0 Unmodified _SLLSAEEAAK_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.7822 2 509.774396 1017.53424 86433.85 0.70051 0.0003571 -0.054116 -2.7587E-05 0.6464 0.00032952 509.774229251815 513.781355531353 44.447 0.61779 44.447 44.098 44.716 0 215 53 7 0 0 0 0.00126 2 24180 74.464 46.29 1 1.6355 1.8323 0 81100000 33467000 47633000 31885 618 12100 12431 49715;49716 49715 SLLVIPNTLAVNAAQDSTDLVAK 23 1 0 Unmodified _SLLVIPNTLAVNAAQDSTDLVAK_ 0 0 0 P17987;F5H282;E7EQR6 P17987 P17987 TCP1 T-complex protein 1 subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1181.6592 2 1177.1523 2352.29004 59155.83 0.1128 0.00013278 0.48374 0.00056943 0.59654 0.00070222 1177.6533603628 1181.66168225826 125.32 0.28757 125.32 125.16 125.44 -7.6294E-06 71 18 6 0 0 0 9.7008E-08 1 83477 56.29 56.29 1 2.2097 2.1938 0 6091600 1883100 4208600 31886 1496 12101 12432 49717 49717 SLLVQTK 7 1 0 Unmodified _SLLVQTK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 398.7544 2 394.747453 787.480354 NaN NaN NaN -0.34008 -0.00013425 NaN NaN NaN NaN 36.897 1.4843 36.897 36.549 38.034 0 0 0 0 0.048672 2 19081 58.981 28.796 1 NaN NaN 0 235900000 0 235900000 31887 1554;936 12102 12433 49718;49719 49719 SLLVQTK 7 1 0 Unmodified _SLLVQTK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 398.7541 2 394.747453 787.480354 NaN NaN NaN -0.32011 -0.00012636 NaN NaN NaN NaN 36.009 0.34388 36.009 35.748 36.092 0 0 0 0 0.03108 1 18347 69.176 26.261 1 NaN NaN 0 214360000 0 214360000 31888 1554;936 12102 12433 49720 49720 SLLYVGNR 8 0 1 Unmodified _SLLYVGNR_ 0 0 0 Q96QE3 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2653 2 461.261259 920.507966 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.768 1 55.768 55.268 56.268 0 0 0 0 0.053457 1 32000 53.554 20.004 1 31889 1984 12103 12434 49721 49721 SLMSADNVR 9 0 1 Oxidation (M) _SLM(ox)SADNVR_ SLM(1)SADNVR SLM(52.48)SADNVR 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.7472 2 504.742573 1007.47059 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.219 1 21.219 20.719 21.719 0 0 0 0 0.014518 1 7548 52.482 34.634 1 31890 1379 12104 12435 49722 49722 1046 SLNDLIEER 9 0 1 Unmodified _SLNDLIEER_ 0 0 0 V9HWH0;Q96KB5;E5RFX4 V9HWH0 V9HWH0 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.7822 2 544.782753 1087.55095 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.987 1 72.987 72.487 73.487 0 0 0 0 0.0055262 1 42811 67.993 33.185 1 31891 1975 12105 12436 49723 49723 SLNGAVPLGSNAR 13 0 1 Unmodified _SLNGAVPLGSNAR_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3458 2 628.341301 1254.66805 78911.88 0.8637 0.0005427 0.0034901 2.193E-06 0.86719 0.00054489 628.341187238251 633.345590701132 52.47 0.56043 52.47 52.235 52.796 3.8147E-06 175 42 5 0 0 0 8.9502E-06 2 29959 101.39 101.39 1 0.65357 0.661 0 19925000 10051000 9874200 31892 878 12106 12437 49724;49725 49725 SLNLTFATPLQPQSVQRPGLAR 22 0 2 Unmodified _SLNLTFATPLQPQSVQRPGLAR_ 0 0 1 H3BTR4;B3KPB2;Q96BT3;H3BUW2;B4DMP9 H3BTR4 H3BTR4 CENPT Centromere protein T MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 805.4534 3 798.779919 2393.31793 67518.02 0.47865 0.00038234 -0.24528 -0.00019592 0.23338 0.00018642 799.114023324635 805.452178328485 117.19 0.40677 117.19 117 117.41 0 115 17 9 0 0 0 3.1563E-08 1 68964 65.454 65.454 1 1.3196 1.1044 0 14237000 4938900 9298400 31893 920 12107 12438 49726 49726 SLNLTFATPLQPQSVQRPGLAR 22 0 2 Unmodified _SLNLTFATPLQPQSVQRPGLAR_ 0 0 1 H3BTR4;B3KPB2;Q96BT3;H3BUW2;B4DMP9 H3BTR4 H3BTR4 CENPT Centromere protein T MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 805.7868 3 798.779919 2393.31793 67131.86 0.65458 0.00052287 -0.4865 -0.00038861 0.16808 0.00013426 799.113858728641 805.786219959977 116.91 0.42015 116.91 116.7 117.12 0 107 18 8 0 0 0 1.3226E-05 1 67888 44.953 44.953 1 1.3758 1.2563 0 8639500 3944400 4695100 31894 920 12107 12438 49727 49727 SLNNQFASFIDK 12 1 0 Unmodified _SLNNQFASFIDK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.3506 2 692.348791 1382.68303 NaN NaN NaN 0.2766 0.00019151 NaN NaN NaN NaN 96.085 1.0877 96.085 95.709 96.797 0 0 0 0 3.044E-05 1 58453 98.898 62.474 1 NaN NaN 0 972560000 972560000 0 + 31895 1308;1309 12108 12439 49728 49728 SLNNQFASFIDK 12 1 0 Unmodified _SLNNQFASFIDK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.3492 2 692.348791 1382.68303 NaN NaN NaN 0.23613 0.00016348 NaN NaN NaN NaN 95.49 1.5729 95.49 94.801 96.374 -7.6294E-06 0 0 0 3.2804E-08 2 59677 108.9 64.594 1 NaN NaN 0 716040000 716040000 0 + 31896 1308;1309 12108 12439 49729;49730 49730 SLNNQFASFIDK 12 1 0 Unmodified _SLNNQFASFIDK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.3495 2 692.348791 1382.68303 NaN NaN NaN -0.057487 -3.9801E-05 NaN NaN NaN NaN 109.57 1.1494 109.57 109.23 110.38 7.6294E-06 0 0 0 0.0017403 1 62990 74.611 57.773 1 NaN NaN 0 283950000 283950000 0 + 31897 1308;1309 12108 12439 49731 49731 SLNNQFASFIDK 12 1 0 Unmodified _SLNNQFASFIDK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.3497 2 692.348791 1382.68303 NaN NaN NaN -0.031019 -2.1476E-05 NaN NaN NaN NaN 109.45 1.2531 109.45 108.95 110.21 0 0 0 0 6.1535E-09 1 61982 116.55 99.521 1 NaN NaN 0 269630000 269630000 0 + 31898 1308;1309 12108 12439 49732 49732 SLNPPLTIVR 10 0 1 Unmodified _SLNPPLTIVR_ 0 0 0 Q14669 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.3413 2 555.337498 1108.66044 NaN NaN NaN -0.13184 -7.3217E-05 NaN NaN NaN NaN 88.784 0.27984 88.784 88.632 88.912 0 0 0 0 0.043632 1 53532 48.44 27.14 1 NaN NaN 0 5338500 0 5338500 31899 1736 12109 12440 49733 49733 SLNSDISYFGVGGK 14 1 0 Unmodified _SLNSDISYFGVGGK_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.3658 2 722.359356 1442.70416 72297.33 0.82317 0.00059462 -0.0096515 -6.9719E-06 0.81352 0.00058765 722.359110606391 726.366880405635 90.137 0.88489 90.137 89.611 90.496 0 313 78 6 0 0 0 5.7533E-05 1 55635 91.937 74.073 1 0.77238 0.7803 0 28587000 14728000 13859000 31900 684 12110 12441 49734 49734 SLNSIEFR 8 0 1 Unmodified _SLNSIEFR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2587 2 483.256174 964.497795 87948.43 0.035368 1.7092E-05 -0.11088 -5.3582E-05 -0.075508 -3.649E-05 483.255883128964 488.260224028316 61.703 0.58212 61.703 61.452 62.035 -3.8147E-06 177 46 5 0 0 0 0.017218 1 35225 60.59 23.569 1 0.50832 0.53733 0 40664000 23601000 17063000 31901 1665 12111 12442 49735 49735 SLNSIEFR 8 0 1 Unmodified _SLNSIEFR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.2611 2 483.256174 964.497795 88721.01 -0.06672 -3.2243E-05 -0.033168 -1.6029E-05 -0.099888 -4.8272E-05 483.256095138159 488.260113573067 71.177 0.50592 71.177 70.956 71.462 0 104 32 5 0 0 0 0.034378 1 37428 49.442 21.335 1 0.26288 0.22458 0 5770700 4471100 1299700 31902 1665 12111 12442 49736 49736 SLNTDVLFGLLR 12 0 1 Unmodified _SLNTDVLFGLLR_ 0 0 0 A8K6G9;Q92620;B4DM30;B4DET0 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.3866 2 674.385177 1346.7558 78072.8 0.70122 0.0004729 0.37674 0.00025407 1.078 0.00072696 674.385884721078 679.389365232165 129.52 0.22864 129.52 129.42 129.65 0 71 15 6 0 0 0 4.7756E-30 2 84389 174.41 162.37 1 1.1707 1.1959 0 14643000 6393300 8249300 31903 760 12112 12443 49737;49738 49738 SLNTDVLFGLLR 12 0 1 Unmodified _SLNTDVLFGLLR_ 0 0 0 A8K6G9;Q92620;B4DM30;B4DET0 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.3856 2 674.385177 1346.7558 78131.51 0.92322 0.00062261 -0.23489 -0.00015841 0.68833 0.0004642 674.385374587684 679.388930918982 129.08 0.2395 129.08 128.98 129.22 0 82 18 6 0 0 0 1.1973E-22 2 86170 155.06 143.01 1 1.2354 1.2522 0 20181000 9860400 10321000 31904 760 12112 12443 49739;49740 49740 SLNYCGHIYTPISCK 15 1 0 Unmodified _SLNYCGHIYTPISCK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5;I3L2D8 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 604.9536 3 604.951768 1811.83348 82065.03 0.40036 0.0002422 0.27578 0.00016684 0.67614 0.00040903 605.285754636931 607.957672970564 79.846 0.44537 79.846 79.598 80.043 0 95 27 6 0 0 0 0.060791 1 43099 10.099 10.099 1 1.1846 0.99687 0 1915500 852280 1063200 31905 1954 12113 12444 49741 49741 SLPALIEQGEGFSQVLR 17 0 1 Unmodified _SLPALIEQGEGFSQVLR_ 0 0 0 Q53FM2;B2R9C5;Q96IY1 Q53FM2 Q53FM2 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 927.5046 2 922.499258 1842.98396 64444.02 0.98759 0.00091105 0.20966 0.00019341 1.1972 0.0011045 922.499722099464 928.004352415395 120.79 0.44863 120.79 120.57 121.02 7.6294E-06 155 32 7 0 0 0 2.6598E-34 2 77961 156.69 141.32 1 0.69027 0.69218 0 17090000 9601700 7488700 31906 866 12114 12445 49742;49743 49743 SLPALIEQGEGFSQVLR 17 0 1 Unmodified _SLPALIEQGEGFSQVLR_ 0 0 0 Q53FM2;B2R9C5;Q96IY1 Q53FM2 Q53FM2 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 928.0057 2 922.499258 1842.98396 64733.21 0.91657 0.00084554 0.1312 0.00012103 1.0478 0.00096657 923.000771020019 927.50333141353 120.31 0.42731 120.31 120.11 120.53 0 161 30 7 0 0 0 8.467E-18 2 79479 125.54 106.41 1 0.58325 0.59061 0 20067000 11259000 8807800 31907 866 12114 12445 49744;49745 49745 SLPALIEQGEGFSQVLR 17 0 1 Unmodified _SLPALIEQGEGFSQVLR_ 0 0 0 Q53FM2;B2R9C5;Q96IY1 Q53FM2 Q53FM2 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 927.5048 2 922.499258 1842.98396 63211.04 0.74111 0.00068367 0.36529 0.00033698 1.1064 0.0010206 923.0013275617 927.503331568516 133.57 0.53 133.57 133.35 133.88 0 124 21 9 0 0 0 0.0014029 2 81288 41.092 35.707 1 0.96447 0.83002 0 7163800 3573300 3590500 31908 866 12114 12445 49746;49747 49746 SLPALIEQGEGFSQVLR 17 0 1 Unmodified _SLPALIEQGEGFSQVLR_ 0 0 0 Q53FM2;B2R9C5;Q96IY1 Q53FM2 Q53FM2 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 928.0068 2 922.499258 1842.98396 63415.77 0.91781 0.00084668 0.20678 0.00019076 1.1246 0.0010374 922.498967552697 927.503096598914 133.31 0.58058 133.31 133.09 133.67 0 111 22 9 0 0 0 8.06E-05 2 80171 62.042 62.042 1 0.91528 0.75395 0 8407000 4141900 4265200 31909 866 12114 12445 49748;49749 49748 SLPASLSFLVK 11 1 0 Unmodified _SLPASLSFLVK_ 0 0 0 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 A0A0G2JMS7 SCRIB Protein scribble homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.3551 2 581.347532 1160.68051 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.24 1 114.24 113.74 114.74 0 0 0 0 0.036275 1 74276 46.158 11.35 1 31910 534 12115 12446 49750 49750 SLPDFTELDLQGK 13 1 0 Unmodified _SLPDFTELDLQGK_ 0 0 0 P22670 P22670 P22670 RFX1 MHC class II regulatory factor RFX1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.3554 2 731.874839 1461.73512 73494.22 1.0328 0.00075585 -0.39407 -0.00028841 0.63869 0.00046744 731.874218650459 735.881602920916 108.8 0.45277 108.8 108.58 109.03 -7.6294E-06 99 28 6 0 0 0 0.022466 1 67925 55.806 45.498 1 0.67957 0.67574 0 9594900 5809100 3785800 31911 1509 12116 12447 49751 49751 SLPDTELMK 9 1 0 Oxidation (M) _SLPDTELM(ox)K_ SLPDTELM(1)K SLPDTELM(70.92)K 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.2631 2 525.262807 1048.51106 82865.39 0.5997 0.000315 0.5734 0.00030118 1.1731 0.00061619 525.26302820177 529.270189312514 42.638 0.98176 42.638 42.413 43.394 0 389 79 8 0 0 0 0.0018333 3 22664 70.919 70.919 1 2.0569 2.3415 0 169620000 64264000 105350000 31912 1569 12117 12448 49752;49753;49754 49753 1340 SLPDTELMK 9 1 0 Oxidation (M) _SLPDTELM(ox)K_ SLPDTELM(1)K SLPDTELM(59.25)K 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.2634 2 525.262807 1048.51106 84278.72 0.43319 0.00022754 0.14057 7.3837E-05 0.57376 0.00030138 525.262893408895 529.269994096379 42.214 1.3082 42.214 41.521 42.83 0 445 113 6 0 0 0 0.0050768 2 22476 59.245 53.074 1 2.1901 2.4487 0 106410000 33176000 73237000 31913 1569 12117 12448 49755;49756 49756 1340 SLPDTELMK 9 1 0 Oxidation (M) _SLPDTELM(ox)K_ SLPDTELM(1)K SLPDTELM(62.55)K 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.2632 2 525.262807 1048.51106 NaN NaN NaN 0.35951 0.00018884 NaN NaN NaN NaN 42.347 0.6622 42.347 42.233 42.895 0 0 0 0 0.0047736 1 22952 62.546 36.809 1 NaN NaN 0 24067000 24067000 0 31914 1569 12117 12448 49757 49757 1340 SLPDTELMK 9 1 0 Oxidation (M) _SLPDTELM(ox)K_ SLPDTELM(1)K SLPDTELM(40)K 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.2632 2 525.262807 1048.51106 83613.31 0.18093 9.5038E-05 0.8235 0.00043256 1.0044 0.00052759 525.263209770856 529.270280990867 49.274 0.59746 49.274 48.883 49.48 -3.8147E-06 209 48 6 0 0 0 0.021841 1 24106 40.002 36.067 1 2.6428 2.1194 0 8235600 2221000 6014600 31915 1569 12117 12448 49758 49758 1340 SLPDTELMK 9 1 0 Oxidation (M) _SLPDTELM(ox)K_ SLPDTELM(1)K SLPDTELM(40)K 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.2634 2 525.262807 1048.51106 83703.21 0.082993 4.3593E-05 0.51903 0.00027263 0.60202 0.00031622 525.262961201668 529.270242853816 49.607 1.1327 49.607 49.123 50.256 0 295 90 6 0 0 0 0.021841 1 23634 40.002 36.067 1 2.4244 1.9751 0 7474000 2392300 5081700 31916 1569 12117 12448 49759 49759 1340 SLPEEDVAEIQHAEEFLIK 19 1 0 Unmodified _SLPEEDVAEIQHAEEFLIK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.0438 3 733.038953 2196.09503 75694.23 0.73284 0.0005372 -0.58977 -0.00043232 0.14308 0.00010488 733.372971135752 736.044405066151 117.52 0.42941 117.52 117.33 117.76 0 76 28 5 0 0 0 0.023589 1 75270 19.036 19.036 1 1.0058 1.0219 0 6282200 3470800 2811400 31917 1398 12118 12449 49760 49760 SLPEEDVAEIQHAEEFLIK 19 1 0 Unmodified _SLPEEDVAEIQHAEEFLIK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.044 3 733.038953 2196.09503 77233.29 0.72854 0.00053404 -0.55111 -0.00040398 0.17743 0.00013006 733.038503343136 736.044321866638 116.95 0.22958 116.95 116.83 117.05 7.6294E-06 53 12 6 0 0 0 0.022614 1 76606 19.292 19.292 1 0.94075 0.93411 0 6102300 2698500 3403800 31918 1398 12118 12449 49761 49761 SLPEEDVAEIQHAEEFLIKPESK 23 2 0 Unmodified _SLPEEDVAEIQHAEEFLIKPESK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.7899 3 880.113069 2637.31738 64201.37 0.85128 0.00074923 -0.35381 -0.0003114 0.49747 0.00043783 880.447306198966 885.78989921093 112.21 0.81738 112.21 111.84 112.66 0 382 57 9 0 0 0 0.00010069 3 70803 36.454 36.454 1 1.0268 1.2123 0 43838000 22113000 21725000 31919 1398 12119 12450 49762;49763;49764 49764 SLPEEDVAEIQHAEEFLIKPESK 23 2 0 Unmodified _SLPEEDVAEIQHAEEFLIKPESK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.343 4 660.336621 2637.31738 74537.46 0.7083 0.00046771 -0.11062 -7.3048E-05 0.59767 0.00039467 660.587292780667 664.594474696304 111.37 0.77022 111.37 110.95 111.72 -7.6294E-06 405 52 12 0 0 0 0.031965 2 71668 12.875 12.875 1 0.9784 1.135 0 80598000 37718000 42880000 31920 1398 12119 12450 49765;49766 49765 SLPEEDVAEIQHAEEFLIKPESK 23 2 0 Unmodified _SLPEEDVAEIQHAEEFLIKPESK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.4495 3 880.113069 2637.31738 63947.18 0.59849 0.00052674 0.11501 0.00010122 0.71349 0.00062796 880.447573749567 885.790110304495 111.37 0.69122 111.37 111.03 111.72 0 348 46 10 0 0 0 6.3774E-08 1 71671 53.201 53.201 1 0.98326 1.1386 0 52238000 25858000 26380000 31921 1398 12119 12450 49767 49767 SLPEEDVAEIQHAEEFLIKPESK 23 2 0 Unmodified _SLPEEDVAEIQHAEEFLIKPESK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.5883 4 660.336621 2637.31738 73080.6 0.93082 0.00061465 -0.42331 -0.00027952 0.50751 0.00033513 660.587277652215 664.594314806767 122.75 0.63696 122.75 122.53 123.17 0 253 30 13 0 0 0 0.058117 1 73237 6.7232 6.7232 1 0.7591 0.64443 0 46174000 27275000 18898000 31922 1398 12119 12450 49768 49768 SLPEEDVAEIQHAEEFLIKPESK 23 2 0 Unmodified _SLPEEDVAEIQHAEEFLIKPESK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 880.4482 3 880.113069 2637.31738 63808.32 0.82211 0.00072355 0.086999 7.6569E-05 0.90911 0.00080012 880.44765819118 885.79021912646 122.76 0.9186 122.76 122.52 123.44 0 207 42 10 0 0 0 8.7215E-10 1 73275 80.683 80.683 1 0.86689 0.73963 0 17615000 9730800 7884500 31923 1398 12119 12450 49769 49769 SLPEEDVAEIQHAEEFLIKPESK 23 2 0 Unmodified _SLPEEDVAEIQHAEEFLIKPESK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 660.5884 4 660.336621 2637.31738 73641.34 0.915 0.0006042 -0.40691 -0.0002687 0.50809 0.00033551 660.587277127017 664.594292776516 122.55 0.70302 122.55 122.34 123.05 0 249 34 13 0 0 0 0.039734 1 72211 10.689 10.689 1 0.67025 0.57198 0 59610000 34107000 25503000 31924 1398 12119 12450 49770 49770 SLPEEDVAEIQHAEEFLIKPESK 23 2 0 Unmodified _SLPEEDVAEIQHAEEFLIKPESK_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 885.7916 3 880.113069 2637.31738 64130.5 0.56707 0.00049908 0.39479 0.00034746 0.96186 0.00084654 880.447851695523 885.79029239697 122.55 0.72898 122.55 122.22 122.95 -7.6294E-06 188 31 10 0 0 0 0.00055656 2 72246 33.79 33.79 1 0.83973 0.71348 0 28252000 15280000 12972000 31925 1398 12119 12450 49771;49772 49772 SLPEWLSDR 9 0 1 Unmodified _SLPEWLSDR_ 0 0 0 Q9BSC4 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.7844 2 551.780013 1101.54547 82358.73 0.81133 0.00044767 0.14569 8.0391E-05 0.95702 0.00052807 551.780140375896 556.784221095889 86.577 0.81789 86.577 86.323 87.14 0 270 59 7 0 0 0 0.014775 2 52043 55.37 55.37 1 0.9099 1.0066 0 59982000 30959000 29024000 31926 2000 12120 12451 49773;49774 49773 SLPEWLSDR 9 0 1 Unmodified _SLPEWLSDR_ 0 0 0 Q9BSC4 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.7804 2 551.780013 1101.54547 81045.41 0.60056 0.00033138 0.32557 0.00017964 0.92613 0.00051102 551.780342860001 556.784148664619 85.52 0.84908 85.52 85.241 86.09 0 273 64 6 0 0 0 0.0048471 2 52558 68.224 68.224 1 0.9165 1.0012 0 37695000 18508000 19186000 31927 2000 12120 12451 49775;49776 49776 SLPEWLSDR 9 0 1 Unmodified _SLPEWLSDR_ 0 0 0 Q9BSC4 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.7799 2 551.780013 1101.54547 80847.15 0.51578 0.0002846 0.65953 0.00036391 1.1753 0.00064851 551.779955426124 556.784715520923 98.961 0.901 98.961 98.597 99.498 0 186 52 8 0 0 0 0.020683 1 55840 50.04 50.04 1 1.5419 1.2599 0 14035000 5956800 8078500 31928 2000 12120 12451 49777 49777 SLPEWLSDR 9 0 1 Unmodified _SLPEWLSDR_ 0 0 0 Q9BSC4 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.78 2 551.780013 1101.54547 79466.38 0.61166 0.0003375 0.303 0.00016719 0.91466 0.00050469 551.779976710492 556.784395858512 98.826 0.7846 98.826 98.585 99.37 0 177 44 7 0 0 0 0.026085 1 54927 47.603 33.088 1 1.6245 1.3359 0 13984000 5855200 8129100 31929 2000 12120 12451 49778 49778 SLPGCQEIAEEFR 13 0 1 Unmodified _SLPGCQEIAEEFR_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;P78365 B3KPJ4 B3KPJ4 PHC2;HPH2 Polyhomeotic-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 773.3652 2 768.361573 1534.70859 70010.88 0.6091 0.00046801 -0.089669 -6.8898E-05 0.51943 0.00039911 768.361713998773 773.365669599439 102.25 0.38157 102.25 102.09 102.47 7.6294E-06 109 28 6 0 0 0 0.013678 1 57998 38.021 38.021 1 1.69 1.4334 0 5109300 1895300 3214000 31930 479 12121 12452 49779 49779 SLPGCQEIAEEFR 13 0 1 Unmodified _SLPGCQEIAEEFR_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;P78365 B3KPJ4 B3KPJ4 PHC2;HPH2 Polyhomeotic-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 773.3633 2 768.361573 1534.70859 69273.01 0.62672 0.00048155 0.081531 6.2646E-05 0.70825 0.00054419 768.36177889651 773.366068046163 102.12 0.36909 102.12 102 102.37 0 96 28 6 0 0 0 0.0011017 1 57051 59.198 52.958 1 1.4564 1.2083 0 5171400 2007200 3164100 31931 479 12121 12452 49780 49780 SLPGQNEDLVLTGYQVDK 18 1 0 Unmodified _SLPGQNEDLVLTGYQVDK_ 0 0 0 P01040 P01040 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.004 2 988.502194 1974.98984 NaN NaN NaN 0.76951 0.00076066 NaN NaN NaN NaN 96.482 0.33842 96.482 96.267 96.606 0 0 0 0 0.00059349 1 60114 74.769 61.788 1 NaN NaN 0 6825800 6825800 0 31932 1438 12122 12453 49781 49781 SLPIVFDEFVDMDFGTGAVK 20 1 0 Oxidation (M) _SLPIVFDEFVDM(ox)DFGTGAVK_ SLPIVFDEFVDM(1)DFGTGAVK SLPIVFDEFVDM(40.55)DFGTGAVK 0 1 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1106.0403 2 1102.03501 2202.05547 58807.78 0.25252 0.00027829 0.44233 0.00048746 0.69485 0.00076575 1103.03741497714 1106.04172240407 133.16 0.30112 133.16 132.96 133.26 0 49 10 8 0 0 0 7.4894E-05 1 89274 40.552 39.468 1 1.1821 1.1808 0 15159000 7175400 7983200 31933 363 12123 12454 49782 49782 271 SLPIYSPEK 9 1 0 Unmodified _SLPIYSPEK_ 0 0 0 E9PDF6;B0I1S9;O43795;E7EQD9;Q05CR5;C9JYW1;C9JUP5;C9K0I9 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.2896 2 517.281857 1032.54916 89368.43 0.49826 0.00025774 0.21189 0.00010961 0.71015 0.00036735 517.281581904725 521.289307509609 60.621 0.36794 60.621 60.461 60.829 3.8147E-06 93 33 5 0 0 0 0.029769 1 34575 46.129 33.169 1 1.8577 1.895 0 14249000 4572000 9677400 31934 805 12124 12455 49783 49783 SLPLNPK 7 1 0 Acetyl (Protein N-term) _(ac)SLPLNPK_ 1 0 0 P62306;A0A0B4J254;F8W0W6 P62306 P62306 SNRPF Small nuclear ribonucleoprotein F MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.4517 1 810.47198 809.464704 68799.52 0.80743 0.0006544 0.14177 0.0001149 0.9492 0.0007693 810.47208385206 818.486058930659 80.027 0.91763 80.027 79.436 80.354 0 225 71 4 0 0 0 0.017841 1 48452 60.788 33.667 1 1.4063 1.4855 0 23652000 9017100 14635000 31935 1643 12125 12456 49784 49784 SLPLPNDK 8 1 0 Unmodified _SLPLPNDK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.2477 2 442.247818 882.481082 90599.02 0.10057 4.4476E-05 0.29877 0.00013213 0.39934 0.00017661 442.2479138861 446.255043507119 46.824 0.82522 46.824 46.446 47.271 0 281 76 6 0 0 0 0.014196 1 25300 63.565 48.126 1 0.98513 1.1148 0 101830000 51449000 50385000 31936 1955 12126 12457 49785 49785 SLPLPNDK 8 1 0 Unmodified _SLPLPNDK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.2474 2 442.247818 882.481082 90934.94 -0.011209 -4.9574E-06 -0.11575 -5.1192E-05 -0.12696 -5.615E-05 442.24770245602 446.254781399687 45.954 0.69214 45.954 45.563 46.255 3.8147E-06 273 58 6 0 0 0 0.013109 2 25195 66.073 50.634 1 0.93503 1.0448 0 93981000 51158000 42823000 31937 1955 12126 12457 49786;49787 49787 SLPLVQVDEK 10 1 0 Unmodified _SLPLVQVDEK_ 0 0 0 Q92615 Q92615 Q92615 LARP4B La-related protein 4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.3267 2 564.318971 1126.62339 80948.9 0.72372 0.00040841 -0.057391 -3.2387E-05 0.66633 0.00037602 564.31921446932 568.326043854842 76.387 0.62556 76.387 76.203 76.828 0 122 51 5 0 0 0 0.0098227 1 45019 54.191 44.833 1 2.6474 2.7578 0 11641000 4308400 7332800 31938 1949 12127 12458 49788 49788 SLPLVQVDEK 10 1 0 Unmodified _SLPLVQVDEK_ 0 0 0 Q92615 Q92615 Q92615 LARP4B La-related protein 4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.3264 2 564.318971 1126.62339 89933.32 0.57713 0.00032569 -0.12283 -6.9316E-05 0.4543 0.00025637 564.319008672732 568.326139580264 75.326 0.61732 75.326 75.039 75.656 0 124 54 5 0 0 0 0.035161 1 45348 40.725 40.725 1 3.4665 3.5533 0 11810000 3959200 7850900 31939 1949 12127 12458 49789 49789 SLPNEEIVQK 10 1 0 Unmodified _SLPNEEIVQK_ 0 0 0 P18583;D3DSF7;Q6ZRV7;J3QSZ5;Q3SWV4;A0JLP4 P18583 P18583 SON Protein SON MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.8215 2 578.814053 1155.61355 80220.48 0.76585 0.00044329 -0.091989 -5.3245E-05 0.67387 0.00039004 578.813607294161 582.821251948097 47.41 0.51719 47.41 47.164 47.682 0 205 44 7 0 0 0 0.0081732 1 25675 56.434 35.809 1 1.1877 1.277 0 38862000 17217000 21644000 31940 1499 12128 12459 49790 49790 SLPNEEIVQK 10 1 0 Unmodified _SLPNEEIVQK_ 0 0 0 P18583;D3DSF7;Q6ZRV7;J3QSZ5;Q3SWV4;A0JLP4 P18583 P18583 SON Protein SON MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.8137 2 578.814053 1155.61355 80748.66 0.84029 0.00048637 -0.5075 -0.00029375 0.33278 0.00019262 578.813822390761 582.821070319239 46.346 0.46295 46.346 46.098 46.561 0 143 34 6 0 0 0 0.0010045 2 25612 77.732 54.992 1 1.3983 1.5281 0 40410000 17984000 22426000 31941 1499 12128 12459 49791;49792 49792 SLPNILTDDR 10 0 1 Unmodified _SLPNILTDDR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.3081 2 572.303852 1142.59315 81056.61 0.47833 0.00027375 0.39681 0.0002271 0.87514 0.00050085 572.303898225392 577.308192771192 83.414 0.77078 83.414 83.1 83.871 0 274 65 6 0 0 0 1.3473E-05 2 49971 102.62 72.455 1 0.98305 1.088 0 60987000 31342000 29645000 31942 2000 12129 12460 49793;49794 49794 SLPNILTDDR 10 0 1 Unmodified _SLPNILTDDR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.3086 2 572.303852 1142.59315 80670.44 0.7439 0.00042574 0.00083109 4.7563E-07 0.74474 0.00042621 572.303699721382 577.307959890404 82.467 0.63254 82.467 82.128 82.761 0 248 54 6 0 0 0 0.0038105 2 50330 62.823 47.562 1 0.95206 1.1066 0 59659000 29200000 30459000 31943 2000 12129 12460 49795;49796 49795 SLPNILTDDR 10 0 1 Unmodified _SLPNILTDDR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.3085 2 572.303852 1142.59315 79859.95 0.63461 0.00036319 0.04433 2.537E-05 0.67894 0.00038856 572.303585445668 577.308265360875 95.192 0.68856 95.192 94.89 95.578 -7.6294E-06 180 47 6 0 0 0 0.0019426 2 53274 71.349 44.965 1 1.5187 1.3039 0 8163700 3147700 5016000 31944 2000 12129 12460 49797;49798 49798 SLPNILTDDR 10 0 1 Unmodified _SLPNILTDDR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.3091 2 572.303852 1142.59315 82529.83 0.44193 0.00025292 0.17071 9.7697E-05 0.61264 0.00035062 572.303683984655 577.308415184321 95.107 0.73371 95.107 94.751 95.484 0 180 50 6 0 0 0 0.010146 2 52472 53.751 34.47 1 1.3398 1.1143 0 6076300 2386100 3690200 31945 2000 12129 12460 49799;49800 49800 SLPNILTDDRFK 12 1 1 Unmodified _SLPNILTDDRFK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.8967 2 709.885541 1417.75653 71654.73 0.56595 0.00040176 -0.0035011 -2.4854E-06 0.56245 0.00039928 709.885111593621 718.896550705279 87.469 0.54332 87.469 87.218 87.761 0 129 53 4 0 0 0 0.00098383 1 52782 75.197 60.562 1 0.78644 0.87165 0 19121000 8992700 10128000 31946 2000 12130 12461 49801 49801 SLPNILTDDRFK 12 1 1 Unmodified _SLPNILTDDRFK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.8871 2 709.885541 1417.75653 NaN NaN NaN 0.17085 0.00012128 NaN NaN NaN NaN 86.264 0.68278 86.264 85.934 86.617 0 0 0 0 0.014373 1 53007 81.771 61.484 1 NaN NaN 0 10921000 10921000 0 31947 2000 12130 12461 49802 49802 SLPNILTDDRFK 12 1 1 Unmodified _SLPNILTDDRFK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.897 2 709.885541 1417.75653 70774.22 0.69319 0.00049209 1.3846 0.00098291 2.0778 0.001475 709.885719110983 718.898105930412 99.632 0.87568 99.632 99.12 99.995 0 174 53 4 0 0 0 0.0052412 2 56254 63.073 49.482 1 1.7269 1.497 0 16404000 6680600 9723400 31948 2000 12130 12461 49803;49804 49804 SLPNILTDDRFK 12 1 1 Unmodified _SLPNILTDDRFK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.5927 3 473.592786 1417.75653 88257.23 0.22237 0.00010531 0.51626 0.0002445 0.73863 0.00034981 473.59309548626 479.600457376 99.59 0.49443 99.59 99.305 99.8 0 125 29 6 0 0 0 0.039885 1 56265 20.427 12.702 1 1.5571 1.2948 0 6011600 2236300 3775300 31949 2000 12130 12461 49805 49805 SLPNILTDDRFK 12 1 1 Unmodified _SLPNILTDDRFK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.8969 2 709.885541 1417.75653 NaN NaN NaN 1.5082 0.0010707 NaN NaN NaN NaN 99.249 0.67043 99.249 98.951 99.622 0 0 0 0 0.029185 1 55316 68.847 45.527 1 NaN NaN 0 11132000 0 11132000 31950 2000 12130 12461 49806 49806 SLPNILTDDRFK 12 1 1 Unmodified _SLPNILTDDRFK_ 0 0 1 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.8846 2 709.885541 1417.75653 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.198 1 99.198 98.698 99.698 0 0 0 0 0.033524 1 55231 57.532 38.786 1 31951 2000 12130 12461 49807 49807 SLPSSSQLK 9 1 0 Unmodified _SLPSSSQLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.7704 2 473.763832 945.513111 86179.4 0.31371 0.00014863 0.27973 0.00013252 0.59344 0.00028115 473.763835214873 477.770563219704 30.412 0.50109 30.412 30.229 30.73 0 143 43 5 0 0 0 0.0064086 3 14810 64.265 16.416 1 1.5466 1.5303 0 25766000 10067000 15699000 31952 1945 12131 12462 49808;49809;49810 49808 SLPSSSQLK 9 1 0 Unmodified _SLPSSSQLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.7723 2 473.763832 945.513111 87998.09 0.77713 0.00036818 0.082253 3.8968E-05 0.85938 0.00040714 473.763824568043 477.770756026089 29.879 0.61567 29.879 29.7 30.315 0 161 48 6 0 0 0 0.011198 2 14497 58.596 20.436 1 1.4586 1.5023 0 32503000 13122000 19381000 31953 1945 12131 12462 49811;49812 49811 SLPSSSQLK 9 1 0 Unmodified _SLPSSSQLK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.7635 2 473.763832 945.513111 88992.85 0.41239 0.00019538 -0.35384 -0.00016764 0.058552 2.774E-05 473.763564257193 477.770702734044 34.58 0.67648 34.58 34.386 35.062 0 211 51 6 0 0 0 0.045082 1 14809 40.002 15.847 1 2.7555 2.2481 0 6076400 1498500 4577900 31954 1945 12131 12462 49813 49813 SLPSVETLGCTSVICSDK 18 1 0 Unmodified _SLPSVETLGCTSVICSDK_ 0 0 0 A0A0S2Z3L2;P16615;H7C5W9;Q8N3X5;Q7Z675;Q7Z6E5;O14983;A8K9K1;Q93084;H3BTW4 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2;DKFZp779O2152;DKFZp779G2251;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.9755 2 976.968816 1951.92308 NaN NaN NaN 0.13052 0.00012751 NaN NaN NaN NaN 98.478 0.35029 98.478 98.251 98.602 0 0 0 0 8.1065E-05 1 60049 66.533 58.02 1 NaN NaN 0 8745700 0 8745700 31955 554 12132 12463 49814 49814 SLPSVETLGCTSVICSDK 18 1 0 Unmodified _SLPSVETLGCTSVICSDK_ 0 0 0 A0A0S2Z3L2;P16615;H7C5W9;Q8N3X5;Q7Z675;Q7Z6E5;O14983;A8K9K1;Q93084;H3BTW4 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2;DKFZp779O2152;DKFZp779G2251;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.4781 2 976.968816 1951.92308 NaN NaN NaN 0.38851 0.00037957 NaN NaN NaN NaN 97.81 0.3707 97.81 97.6 97.971 0 0 0 0 1.8715E-09 1 61065 88.552 77.34 1 NaN NaN 0 5158400 0 5158400 31956 554 12132 12463 49815 49815 SLPSVETLGCTSVICSDK 18 1 0 Unmodified _SLPSVETLGCTSVICSDK_ 0 0 0 A0A0S2Z3L2;P16615;H7C5W9;Q8N3X5;Q7Z675;Q7Z6E5;O14983;A8K9K1;Q93084;H3BTW4 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2;DKFZp779O2152;DKFZp779G2251;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 981.4706 2 976.968816 1951.92308 NaN NaN NaN -3.5336 -0.0034522 NaN NaN NaN NaN 111.25 0.35943 111.25 111.03 111.39 7.6294E-06 0 0 0 0.0040547 1 64395 48.14 34.234 1 NaN NaN 0 1437500 0 1437500 31957 554 12132 12463 49816 49816 SLPTTVPESPNYR 13 0 1 Unmodified _SLPTTVPESPNYR_ 0 0 0 E5RH50;A0A0B4J210;Q6PKG0;H0YC33 E5RH50 E5RH50 LARP1 La-related protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.8781 2 730.87263 1459.73071 NaN NaN NaN 0.3865 0.00028248 NaN NaN NaN NaN 66.533 0.3227 66.533 66.3 66.623 0 0 0 0 0.0027541 2 38292 67.726 52.096 1 NaN NaN 0 4815100 0 4815100 31958 500 12133 12464 49817;49818 49817 SLPVEEQPK 9 1 0 Unmodified _SLPVEEQPK_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.7777 2 513.776939 1025.53933 86690.15 0.48824 0.00025085 -0.13678 -7.0276E-05 0.35146 0.00018057 513.77680245276 517.783935323527 33.064 0.73459 33.064 32.679 33.414 0 252 72 5 0 0 0 0.012915 1 16399 57.047 41.666 1 0.84613 0.83419 0 24675000 13269000 11406000 31959 1854 12134 12465 49819 49819 SLPVEEQPK 9 1 0 Unmodified _SLPVEEQPK_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.7773 2 513.776939 1025.53933 86071.23 0.57146 0.0002936 -0.37271 -0.00019149 0.19875 0.00010211 513.776775756265 517.783597643961 32.594 0.78391 32.594 32.246 33.03 -3.8147E-06 281 73 5 0 0 0 0.011198 1 16092 58.596 37.897 1 0.84231 0.90879 0 22633000 9626900 13006000 31960 1854 12134 12465 49820 49820 SLQALGEVIEAELR 14 0 1 Unmodified _SLQALGEVIEAELR_ 0 0 0 Q6IBR2;K7ER00;Q9Y285;K7EK06;K7ER16 Q6IBR2 Q6IBR2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.4227 2 764.422487 1526.83042 72504.32 0.95583 0.00073066 -1.65 -0.0012613 -0.69419 -0.00053065 764.422314953081 769.426510250794 125.87 0.47555 125.87 125.65 126.13 7.6294E-06 209 34 10 0 0 0 3.8524E-14 3 81842 125.54 99.499 1 1.3436 1.3902 0 6020800 2273200 3747600 31961 1347 12135 12466 49821;49822;49823 49821 SLQALGEVIEAELR 14 0 1 Unmodified _SLQALGEVIEAELR_ 0 0 0 Q6IBR2;K7ER00;Q9Y285;K7EK06;K7ER16 Q6IBR2 Q6IBR2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.4229 2 764.422487 1526.83042 71404.31 0.83424 0.00063771 0.29031 0.00022192 1.1246 0.00085964 764.422543160138 769.426855760837 125.41 0.5963 125.41 125.16 125.75 -7.6294E-06 173 39 7 0 0 0 3.3454E-14 3 83536 127.17 101.13 1 1.3043 1.2977 0 8177100 3602200 4574900 31962 1347 12135 12466 49824;49825;49826 49826 SLQEEHVAVAQLR 13 0 1 Unmodified _SLQEEHVAVAQLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.399 2 740.399347 1478.78414 73208.5 0.48066 0.00035588 0.056155 4.1577E-05 0.53682 0.00039746 740.39954917211 745.403536066379 52.355 0.31577 52.355 52.177 52.493 0 101 23 6 0 0 0 5.9608E-06 2 29001 105.17 95.982 1 1.3353 1.3593 0 27300000 11871000 15429000 31963 1754 12136 12467 49827;49828 49828 SLQEEHVAVAQLR 13 0 1 Unmodified _SLQEEHVAVAQLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.2715 3 493.935323 1478.78414 85069.02 0.029961 1.4799E-05 0.34988 0.00017282 0.37984 0.00018762 493.935372808792 497.271859414912 52.334 0.36894 52.334 52.141 52.51 0 147 27 7 0 0 0 2.5919E-06 2 29031 83.617 83.617 1 1.2024 1.23 0 35036000 16267000 18769000 31964 1754 12136 12467 49829;49830 49829 SLQEEHVAVAQLR 13 0 1 Unmodified _SLQEEHVAVAQLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.2713 3 493.935323 1478.78414 85146.33 0.28428 0.00014042 -0.23232 -0.00011475 0.051961 2.5666E-05 494.268924963005 497.271455143686 50.397 0.49613 50.397 50.238 50.734 3.8147E-06 149 45 7 0 0 0 0.00079819 1 28612 37.793 37.793 1 1.2103 1.3226 0 36797000 17562000 19235000 31965 1754 12136 12467 49831 49831 SLQEEHVAVAQLR 13 0 1 Unmodified _SLQEEHVAVAQLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.3733 2 740.399347 1478.78414 71592.59 0.71817 0.00053173 0.094585 7.003E-05 0.81275 0.00060176 740.900235159555 745.403674069126 50.399 0.18188 50.399 50.308 50.49 0 49 16 6 0 0 0 0.00089457 1 28494 83.397 83.397 1 1.6777 1.675 0 11560000 4980000 6580000 31966 1754 12136 12467 49832 49832 SLQELFLAHILSPWGAEVK 19 1 0 Unmodified _SLQELFLAHILSPWGAEVK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.7282 3 713.393002 2137.15718 70543.1 0.12742 9.09E-05 0.75125 0.00053594 0.87867 0.00062684 713.727813395524 716.399190765254 133.34 0.16461 133.34 133.22 133.39 0 25 4 8 0 0 0 3.4318E-78 2 87305 173.77 152.09 1 0.59679 0.68551 0 200610000 122260000 78342000 31967 139 12137 12468 49833;49834 49833 SLQELFLAHILSPWGAEVK 19 1 0 Unmodified _SLQELFLAHILSPWGAEVK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.7275 3 713.393002 2137.15718 71390.56 0.046934 3.3482E-05 0.31661 0.00022587 0.36354 0.00025935 713.72753756187 716.398989125084 133.32 0.17761 133.32 133.23 133.4 0 33 4 11 0 0 0 3.8608E-06 1 89550 53.779 38.357 1 0.57167 0.6692 0 304810000 189450000 115360000 31968 139 12137 12468 49835 49835 SLQEQADAAEER 12 0 1 Unmodified _SLQEQADAAEER_ 0 0 0 Q1ZYL5;F5H7S3;D9YZV7;H7BYY1;H0YK48;B7Z722;B7Z596;Q59GR8;Q07413;H0YN06 Q1ZYL5 Q1ZYL5 TPM1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.8196 2 673.81277 1345.61099 NaN NaN NaN 0.11192 7.5415E-05 NaN NaN NaN NaN 25.926 0.2839 25.926 25.793 26.077 0 0 0 0 5.0301E-05 1 11548 94.465 76.198 1 NaN NaN 0 5960300 0 5960300 31969 1094 12138 12469 49836 49836 SLQEQADAAEER 12 0 1 Unmodified _SLQEQADAAEER_ 0 0 0 Q1ZYL5;F5H7S3;D9YZV7;H7BYY1;H0YK48;B7Z722;B7Z596;Q59GR8;Q07413;H0YN06 Q1ZYL5 Q1ZYL5 TPM1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.817 2 673.81277 1345.61099 77105.02 0.65439 0.00044094 0.39695 0.00026747 1.0513 0.00070841 673.812409098593 678.817221826637 25.687 0.25788 25.687 25.543 25.801 0 35 16 4 0 0 0 1.4823E-22 1 11272 153.12 124.91 1 1.8578 1.8452 0 8751200 3706700 5044500 31970 1094 12138 12469 49837 49837 SLQESRPFSVDFFR 14 0 2 Unmodified _SLQESRPFSVDFFR_ 0 0 1 B3KQ21;Q9NYH9;B3KX32;Q9P1J8;J3KRR8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.29 3 572.289766 1713.84747 79413.86 0.7717 0.00044163 0.2888 0.00016528 1.0605 0.00060691 572.624221880578 578.962062713646 111.65 0.44723 111.65 111.39 111.84 0 144 24 10 0 0 0 8.7148E-05 2 64675 55.841 52 1 1.533 1.2782 0 16442000 6128800 10313000 31971 925 12139 12470 49838;49839 49839 SLQESRPFSVDFFR 14 0 2 Unmodified _SLQESRPFSVDFFR_ 0 0 1 B3KQ21;Q9NYH9;B3KX32;Q9P1J8;J3KRR8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.6246 3 572.289766 1713.84747 80717.7 0.51413 0.00029423 0.34406 0.0001969 0.85819 0.00049113 572.624222926312 578.962182246502 111.43 0.42081 111.43 111.17 111.59 0 123 20 8 0 0 0 8.3694E-05 2 63594 58.487 54.646 1 1.4462 1.3311 0 14460000 5927900 8532400 31972 925 12139 12470 49840;49841 49841 SLQHQEQLEDSK 12 1 0 Unmodified _SLQHQEQLEDSK_ 0 0 0 I3L427;A0A0S2Z5C7;I3L419;A0A0S2Z5F0;I3L156;Q9BSJ6 I3L427 I3L427 FAM64A Protein FAM64A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.3566 2 721.34952 1440.68449 73157.69 0.54194 0.00039093 0.58634 0.00042296 1.1283 0.00081388 721.349366782086 725.356634028461 19.08 0.11003 19.08 19.025 19.135 0 17 5 5 0 0 0 0.00018807 1 5592 76.332 64.466 1 1.0888 1.0815 0 6129000 2889900 3239100 31973 581 12140 12471 49842 49842 SLQQLAEER 9 0 1 Unmodified _SLQQLAEER_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.287 2 537.28292 1072.55129 82608.97 0.65279 0.00035073 -0.51507 -0.00027674 0.13772 7.3994E-05 537.282354487058 542.286869773611 54.069 0.54728 54.069 53.878 54.425 -3.8147E-06 129 44 4 0 0 0 0.011379 1 26940 58.433 18.366 1 2.9809 2.5883 0 2329900 496860 1833100 31974 523 12141 12472 49843 49843 SLQQLAEER 9 0 1 Unmodified _SLQQLAEER_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.2866 2 537.28292 1072.55129 82700.4 0.43013 0.0002311 -0.36198 -0.00019449 0.068151 3.6617E-05 537.282555676337 542.286888892837 54.494 0.61093 54.494 54.25 54.86 0 122 48 4 0 0 0 0.0049289 1 26625 68.016 22.336 1 3.2375 2.9153 0 2032000 615260 1416800 31975 523 12141 12472 49844 49844 SLQSVAEER 9 0 1 Unmodified _SLQSVAEER_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7EX53 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.7656 2 509.76182 1017.50909 NaN NaN NaN -0.21684 -0.00011054 NaN NaN NaN NaN 29.725 0.25417 29.725 29.617 29.871 -1.9073E-06 0 0 0 0.0043046 1 14326 76.679 33.555 1 NaN NaN 0 3608800 0 3608800 31976 121 12142 12473 49845 49845 SLRPDPNFDALISK 14 1 1 Unmodified _SLRPDPNFDALISK_ 0 0 1 A0A024RCR9;Q06587;B4DVB5;B4DW57;X6RFN3;Q99496 A0A024RCR9;X6RFN3 A0A024RCR9 RING1;RNF2 E3 ubiquitin-protein ligase RING1;E3 ubiquitin-protein ligase RING2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.9514 3 524.950862 1571.83076 90364.88 0.57291 0.00030075 -0.27896 -0.00014644 0.29396 0.00015431 525.284768549508 530.957946787611 87.077 0.672 87.077 86.763 87.435 0 166 54 5 0 0 0 0.00096504 2 52593 39.143 33.526 1 1.0628 1.232 0 29356000 11651000 17705000 31977 369;1992 12143 12474 49846;49847 49847 SLRPDPNFDALISK 14 1 1 Unmodified _SLRPDPNFDALISK_ 0 0 1 A0A024RCR9;Q06587;B4DVB5;B4DW57;X6RFN3;Q99496 A0A024RCR9;X6RFN3 A0A024RCR9 RING1;RNF2 E3 ubiquitin-protein ligase RING1;E3 ubiquitin-protein ligase RING2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 786.9221 2 786.922655 1571.83076 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.008 1 87.008 86.508 87.508 0 0 0 0 0.011663 1 52500 57.175 38.043 1 31978 369;1992 12143 12474 49848 49848 SLRPDPNFDALISK 14 1 1 Unmodified _SLRPDPNFDALISK_ 0 0 1 A0A024RCR9;Q06587;B4DVB5;B4DW57;X6RFN3;Q99496 A0A024RCR9;X6RFN3 A0A024RCR9 RING1;RNF2 E3 ubiquitin-protein ligase RING1;E3 ubiquitin-protein ligase RING2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.9351 2 786.922655 1571.83076 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.072 1 87.072 86.572 87.572 7.6294E-06 0 0 0 0.031951 1 52554 52.495 34.687 1 31979 369;1992 12143 12474 49849 49849 SLRPDPNFDALISK 14 1 1 Unmodified _SLRPDPNFDALISK_ 0 0 1 A0A024RCR9;Q06587;B4DVB5;B4DW57;X6RFN3;Q99496 A0A024RCR9;X6RFN3 A0A024RCR9 RING1;RNF2 E3 ubiquitin-protein ligase RING1;E3 ubiquitin-protein ligase RING2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.2928 3 524.950862 1571.83076 83465.16 0.6666 0.00034993 0.045084 2.3667E-05 0.71169 0.0003736 525.285299292773 530.958273865751 85.835 0.58253 85.835 85.496 86.078 0 210 42 7 0 0 0 0.00056723 3 52747 55.186 50.091 1 1.2047 1.4163 0 68681000 33516000 35165000 31980 369;1992 12143 12474 49850;49851;49852 49851 SLRPDPNFDALISK 14 1 1 Unmodified _SLRPDPNFDALISK_ 0 0 1 A0A024RCR9;Q06587;B4DVB5;B4DW57;X6RFN3;Q99496 A0A024RCR9;X6RFN3 A0A024RCR9 RING1;RNF2 E3 ubiquitin-protein ligase RING1;E3 ubiquitin-protein ligase RING2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.4388 2 786.922655 1571.83076 69176.59 0.99191 0.00078055 0.17427 0.00013714 1.1662 0.00091769 786.922339790254 795.933757123268 85.837 0.4506 85.837 85.552 86.002 0 139 32 6 0 0 0 0.038545 1 52737 45.357 45.357 1 1.2721 1.4772 0 37914000 17273000 20640000 31981 369;1992 12143 12474 49853 49853 SLSAIYLEK 9 1 0 Unmodified _SLSAIYLEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2896 2 512.289682 1022.56481 NaN NaN NaN 1.1375 0.00058274 NaN NaN NaN NaN 72.079 0.30524 72.079 71.953 72.258 0 0 0 0 0.008522 1 42175 68.016 46.716 1 NaN NaN 0 8446800 8446800 0 31982 1754 12144 12475 49854 49854 SLSALGDVIAALR 13 0 1 Unmodified _SLSALGDVIAALR_ 0 0 0 H3BUC0;H3BTL6;B7Z3I6;B7Z896;B7Z8X8;F5H3M2;B7Z808;B7Z5U4;Q9BVG8 H3BUC0 H3BUC0 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.382 2 643.377352 1284.74015 NaN NaN NaN -0.38212 -0.00024584 NaN NaN NaN NaN 125.87 0.44666 125.87 125.57 126.01 0 0 0 0 0.0035316 1 81888 64.82 46.508 1 NaN NaN 0 1042800 0 1042800 31983 1089 12145 12476 49855 49855 SLSALGDVIAALR 13 0 1 Unmodified _SLSALGDVIAALR_ 0 0 0 H3BUC0;H3BTL6;B7Z3I6;B7Z896;B7Z8X8;F5H3M2;B7Z808;B7Z5U4;Q9BVG8 H3BUC0 H3BUC0 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.3818 2 643.377352 1284.74015 NaN NaN NaN -0.17489 -0.00011252 NaN NaN NaN NaN 125.32 0.3159 125.32 125.17 125.49 0 0 0 0 0.0024792 1 83540 69.346 42.831 1 NaN NaN 0 1502600 0 1502600 31984 1089 12145 12476 49856 49856 SLSDNGQPGTPDPADSGGTSAK 22 1 0 Unmodified _SLSDNGQPGTPDPADSGGTSAK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1030.4653 2 1029.96416 2057.91377 63693.43 0.4377 0.00045081 0.75549 0.00077813 1.1932 0.0012289 1030.46623279636 1033.97110323232 34.888 0.29533 34.888 34.723 35.018 -3.8147E-06 70 24 4 0 0 0 6.9667E-06 1 17684 48.527 43.35 1 2.4502 2.4775 0 8806500 2659200 6147200 31985 1412 12146 12477 49857 49857 SLSDNGQPGTPDPADSGGTSAK 22 1 0 Unmodified _SLSDNGQPGTPDPADSGGTSAK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1034.4757 2 1029.96416 2057.91377 60945.15 0.050574 5.209E-05 0.19581 0.00020167 0.24638 0.00025376 1030.46587967801 1033.97152790608 41.626 0.48597 41.626 41.374 41.86 0 178 34 7 0 0 0 0.060351 2 18674 19.075 19.075 1 1.9642 1.5427 0 2051000 815260 1235700 31986 1412 12146 12477 49858;49859 49858 SLSDPCYYNK 10 1 0 Unmodified _SLSDPCYYNK_ 0 0 0 A6NHB5;Q14202;A6NHN7 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.7809 2 623.774071 1245.53359 76756.9 0.41542 0.00025913 0.79505 0.00049593 1.2105 0.00075506 623.775147520993 627.78134362566 37.335 0.50944 37.335 37.183 37.693 3.8147E-06 123 42 5 0 0 0 0.00071336 2 19351 82.426 74.946 1 0.71844 0.73524 0 25644000 13625000 12019000 31987 681 12147 12478 49860;49861 49861 SLSDTLVSTTAPSGIVNVSVK 21 1 0 Unmodified _SLSDTLVSTTAPSGIVNVSVK_ 0 0 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1042.0728 2 1038.06516 2074.11576 58822.33 0.50282 0.00052196 0.87669 0.00091006 1.3795 0.001432 1038.5672160092 1042.57476829084 121.06 0.1854 121.06 120.96 121.15 7.6294E-06 24 7 5 0 0 0 0.032587 1 71090 21.886 21.886 1 1.8537 1.4428 0 3532500 1263800 2268700 31988 1833 12148 12479 49862 49862 SLSEIHSPNIQDSSFDSVR 19 0 1 Unmodified _SLSEIHSPNIQDSSFDSVR_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.6754 3 706.674785 2117.00253 NaN NaN NaN 0.45807 0.00032371 NaN NaN NaN NaN 78.566 0.47495 78.566 78.358 78.833 0 0 0 0 0.00035331 2 46639 47.088 41.958 1 NaN NaN 0 9875800 9875800 0 31989 1795 12149 12480 49863;49864 49864 SLSEIHSPNIQDSSFDSVR 19 0 1 Unmodified _SLSEIHSPNIQDSSFDSVR_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.3453 3 706.674785 2117.00253 70335.66 0.59645 0.00042149 -1.0438 -0.00073762 -0.44735 -0.00031613 706.675185516585 710.344154590343 90.197 0.60361 90.197 89.958 90.561 0 196 43 7 0 0 0 8.6358E-06 2 49902 42.172 38.784 1 2.1138 1.819 0 7131800 2372500 4759300 31990 1795 12149 12480 49865;49866 49865 SLSEIHSPNIQDSSFDSVR 19 0 1 Unmodified _SLSEIHSPNIQDSSFDSVR_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 706.8616 3 706.674785 2117.00253 72176.55 0.39955 0.00028235 -0.31704 -0.00022404 0.082514 5.831E-05 707.008909939395 710.344392031267 90.02 0.76108 90.02 89.827 90.588 0 169 50 7 0 0 0 0.040853 1 49047 23.477 14.071 1 1.8855 1.5672 0 5993900 2109200 3884700 31991 1795 12149 12480 49867 49867 SLSIEIGHEVK 11 1 0 Unmodified _SLSIEIGHEVK_ 0 0 0 C9JTT8;Q53XK0;Q68DU7;H7C1N3;O15155 C9JTT8 C9JTT8 BET1;DKFZp781C0425 BET1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.336 2 606.335153 1210.65575 79089.08 0.40074 0.00024298 -0.57885 -0.00035098 -0.17811 -0.000108 606.334995755595 610.342253546266 59.12 0.49782 59.12 58.804 59.302 3.8147E-06 97 39 6 0 0 0 7.3902E-08 2 33643 113.62 80.999 1 1.0199 1.0289 0 18416000 6164700 12252000 31992 1142 12150 12481 49868;49869 49869 SLSIEIGHEVK 11 1 0 Unmodified _SLSIEIGHEVK_ 0 0 0 C9JTT8;Q53XK0;Q68DU7;H7C1N3;O15155 C9JTT8 C9JTT8 BET1;DKFZp781C0425 BET1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.335 2 606.335153 1210.65575 77613.23 0.513 0.00031105 -0.40273 -0.00024419 0.11027 6.6863E-05 606.335376429061 610.342386216827 57.736 0.43284 57.736 57.589 58.022 0 104 34 6 0 0 0 0.0004486 2 33444 77.662 57.672 1 1.1989 1.2097 0 28286000 12797000 15490000 31993 1142 12150 12481 49870;49871 49871 SLSIEIGHEVK 11 1 0 Unmodified _SLSIEIGHEVK_ 0 0 0 C9JTT8;Q53XK0;Q68DU7;H7C1N3;O15155 C9JTT8 C9JTT8 BET1;DKFZp781C0425 BET1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.8443 2 606.335153 1210.65575 79303.31 0.40691 0.00024672 -0.11752 -7.1258E-05 0.28939 0.00017546 606.33531226159 610.34220931327 68.735 0.30151 68.735 68.579 68.88 0 73 22 5 0 0 0 0.026417 2 35967 40.727 25.664 1 0.75662 0.62491 0 2338700 1307300 1031400 31994 1142 12150 12481 49872;49873 49872 SLSIEIGHEVK 11 1 0 Unmodified _SLSIEIGHEVK_ 0 0 0 C9JTT8;Q53XK0;Q68DU7;H7C1N3;O15155 C9JTT8 C9JTT8 BET1;DKFZp781C0425 BET1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 606.335 2 606.335153 1210.65575 80498.22 0.47519 0.00028812 -0.45478 -0.00027575 0.020407 1.2374E-05 606.335228551109 610.341832222727 69.08 0.30985 69.08 68.934 69.243 0 72 21 5 0 0 0 0.043879 1 35356 35.541 12.801 1 0.84981 0.72056 0 1455400 846310 609130 31995 1142 12150 12481 49874 49874 SLSPDCGGSIEVMQSFLK 18 1 0 Oxidation (M) _SLSPDCGGSIEVM(ox)QSFLK_ SLSPDCGGSIEVM(1)QSFLK SLSPDCGGSIEVM(67.96)QSFLK 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.97 2 985.963533 1969.91251 NaN NaN NaN -0.0073782 -7.2746E-06 NaN NaN NaN NaN 95.048 0.40769 95.048 94.824 95.232 0 0 0 0 2.9009E-06 1 59098 67.964 49.339 1 NaN NaN 0 4880600 0 4880600 31996 486 12151 12482 49875 49875 335 SLSPDCGGSIEVMQSFLK 18 1 0 Oxidation (M) _SLSPDCGGSIEVM(ox)QSFLK_ SLSPDCGGSIEVM(1)QSFLK SLSPDCGGSIEVM(59.61)QSFLK 0 1 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 990.4722 2 985.963533 1969.91251 59687.93 0.60572 0.00059722 -0.21129 -0.00020833 0.39443 0.00038889 986.464943971203 989.970534439382 129.82 0.49387 129.82 129.55 130.05 0 74 16 8 0 0 0 2.1745E-05 1 77697 59.607 46.627 1 1.4081 1.1011 0 3394000 821820 2572200 31997 486 12151 12482 49876 49876 335 SLSPDCGGSIEVMQSFLK 18 1 0 Unmodified _SLSPDCGGSIEVMQSFLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.9736 2 977.966076 1953.9176 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.33 1 117.33 116.83 117.83 0 0 0 0 0.023466 1 76933 41.644 26.272 1 31998 486 12151 12483 49877 49877 SLSPDCGGSIEVMQSFLK 18 1 0 Unmodified _SLSPDCGGSIEVMQSFLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 982.474 2 977.966076 1953.9176 61334.82 0.22756 0.00022254 -0.67976 -0.00066479 -0.45221 -0.00044224 978.467472298456 981.972887884831 129.99 0.36322 129.99 129.77 130.13 0 116 17 8 0 0 0 2.8792E-05 2 78638 67.115 67.115 1 1.4707 1.1719 0 9734400 3931300 5803100 31999 486 12151 12483 49878;49879 49878 SLSPDCGGSIEVMQSFLK 18 1 0 Unmodified _SLSPDCGGSIEVMQSFLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 982.475 2 977.966076 1953.9176 61216.99 0.57688 0.00056417 -0.58864 -0.00057567 -0.011751 -1.1492E-05 977.965669004403 981.973172271129 129.84 0.37732 129.84 129.6 129.98 0 96 12 11 0 0 0 2.7351E-05 2 77634 68.044 59.74 1 1.355 1.088 0 14687000 6351900 8335400 32000 486 12151 12483 49880;49881 49880 SLSSSLDDTEVK 12 1 0 Unmodified _SLSSSLDDTEVK_ 0 0 0 Q53XM7;O95292;B4DNS4;Q6ZSP7;Q6ZR82;B3KVU7 Q53XM7 Q53XM7 VAPB Vesicle-associated membrane protein-associated protein B/C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.8212 2 640.814447 1279.61434 NaN NaN NaN 0.32199 0.00020634 NaN NaN NaN NaN 50.684 0.54373 50.684 50.356 50.899 0 0 0 0 0.0019686 1 28551 72.006 42.533 1 NaN NaN 0 19739000 0 19739000 32001 1423 12152 12484 49882 49882 SLSTTNVFACSDRPTVIYSSNHK 23 1 1 Unmodified _SLSTTNVFACSDRPTVIYSSNHK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.5761 4 646.816964 2583.23875 75409.67 0.69173 0.00044742 -0.61736 -0.00039932 0.07437 4.8104E-05 647.067256399372 651.823403012729 73.275 0.62741 73.275 73.005 73.633 0 163 54 6 0 0 0 0.025904 1 43983 15.128 15.128 1 0.64421 0.73019 0 16875000 10428000 6447100 32002 1770 12153 12485 49883 49883 SLSTTNVFACSDRPTVIYSSNHK 23 1 1 Unmodified _SLSTTNVFACSDRPTVIYSSNHK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 862.4233 3 862.08686 2583.23875 64917.23 0.4509 0.00038872 0.1859 0.00016026 0.6368 0.00054897 862.421542859678 868.429451743872 85.324 0.40965 85.324 85.153 85.562 0 141 26 8 0 0 0 6.2908E-08 1 46688 53.342 41.882 1 1.2295 1.0113 0 5101500 2714600 2387000 32003 1770 12153 12485 49884 49884 SLSTTNVFACSDRPTVIYSSNHK 23 1 1 Unmodified _SLSTTNVFACSDRPTVIYSSNHK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3234 4 646.816964 2583.23875 73763.97 0.63562 0.00041113 0.06742 4.3609E-05 0.70304 0.00045474 647.067475680172 651.573228344237 85.343 0.48064 85.343 85.139 85.619 0 199 30 9 0 0 0 0.039734 1 46742 10.689 10.689 1 1.2069 1.0416 0 13115000 6789300 6325700 32004 1770 12153 12485 49885 49885 SLSTTNVFACSDRPTVIYSSNHK 23 1 1 Unmodified _SLSTTNVFACSDRPTVIYSSNHK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.3182 4 646.816964 2583.23875 74441.36 0.68607 0.00044376 -0.087553 -5.6631E-05 0.59852 0.00038713 647.06762607577 651.57328324959 85.329 0.5166 85.329 85.1 85.617 -7.6294E-06 227 31 11 0 0 0 0.025904 2 45785 15.128 15.128 1 1.1689 0.98745 0 9506600 3874000 5632600 32005 1770 12153 12485 49886;49887 49887 SLSTTNVFACSDRPTVIYSSNHK 23 1 1 Unmodified _SLSTTNVFACSDRPTVIYSSNHK_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 868.429 3 862.08686 2583.23875 64622.54 0.46989 0.00040508 0.21586 0.00018609 0.68574 0.00059117 862.421556797893 868.429167250042 85.342 0.46432 85.342 85.13 85.594 0 164 28 9 0 0 0 1.4419E-05 1 45823 41.136 33.69 1 1.2485 1.0514 0 4162300 1774200 2388000 32006 1770 12153 12485 49888 49888 SLSTWQPTLLPNNTVFSR 18 0 1 Unmodified _SLSTWQPTLLPNNTVFSR_ 0 0 0 A6NHB5;Q14202 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1031.5428 2 1031.04182 2060.06909 62507.92 0.73458 0.00075738 0.51355 0.00052949 1.2481 0.0012869 1031.54378730356 1036.04602066295 118.62 0.39753 118.62 118.43 118.83 7.6294E-06 79 22 6 0 0 0 4.5007E-05 1 76138 59.57 59.57 1 0.55886 0.55657 0 8597700 5305000 3292600 32007 681 12154 12486 49889 49889 SLSVLSSSTIIANPDIPEAYK 21 1 0 Unmodified _SLSVLSSSTIIANPDIPEAYK_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1103.5847 2 1103.08609 2204.15763 59299.14 0.56207 0.00062001 0.086682 9.5618E-05 0.64875 0.00071563 1103.58770759343 1107.09263147808 128.21 0.48549 128.21 127.98 128.47 0 126 19 9 0 0 0 0.0039764 2 77299 29.013 29.013 1 0.31966 0.24934 0 12122000 8674900 3447300 32008 1525 12155 12487 49890;49891 49890 SLSVLSSSTIIANPDIPEAYK 21 1 0 Unmodified _SLSVLSSSTIIANPDIPEAYK_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1103.5874 2 1103.08609 2204.15763 59224.22 0.29113 0.00032114 0.39748 0.00043846 0.68861 0.0007596 1103.58775253787 1107.09322020984 127.99 0.4585 127.99 127.82 128.28 0 116 19 8 0 0 0 4.3697E-05 2 76281 44.601 44.601 1 0.31383 0.25216 0 16171000 12318000 3853800 32009 1525 12155 12487 49892;49893 49892 SLTALSEPR 9 0 1 Unmodified _SLTALSEPR_ 0 0 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.2734 2 487.269281 972.52401 87813.77 0.28779 0.00014023 -0.1447 -7.051E-05 0.14308 6.9721E-05 487.269101681051 492.273285268141 54.088 0.56746 54.088 53.842 54.41 -3.8147E-06 152 46 4 0 0 0 0.04753 2 26942 39.022 20.291 1 1.3366 1.1597 0 2438100 946660 1491500 32010 1879 12156 12488 49894;49895 49894 SLTALSEPR 9 0 1 Unmodified _SLTALSEPR_ 0 0 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.2732 2 487.269281 972.52401 87430.82 0.14431 7.0318E-05 -0.11678 -5.6903E-05 0.027531 1.3415E-05 487.269186534185 492.273298110548 54.415 0.61863 54.415 54.138 54.756 0 148 48 4 0 0 0 0.024384 2 26558 48.283 23.36 1 1.3441 1.2064 0 2271500 889760 1381700 32011 1879 12156 12488 49896;49897 49897 SLTANPELIDR 11 0 1 Unmodified _SLTANPELIDR_ 0 0 0 Q49AG4;G3V1J5;A8QI98;Q9Y2L1;F2Z2C0 Q49AG4 Q49AG4 DIS3 Exosome complex exonuclease RRP44 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.8353 2 614.830234 1227.64592 80633.34 0.15883 9.7653E-05 0.95723 0.00058854 1.1161 0.00068619 614.83056146254 619.834954768044 66.953 0.39326 66.953 66.723 67.116 0 101 34 4 0 0 0 0.0059147 1 39616 55.353 37.041 1 1.2203 1.2159 0 11697000 4266700 7430000 32012 802 12157 12489 49898 49898 SLTDPSQESHTEAISDAETSSSDISFSGIATR 32 0 1 Unmodified _SLTDPSQESHTEAISDAETSSSDISFSGIATR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1113.1802 3 1109.5096 3325.50698 58016.85 0.13277 0.00014731 -0.055909 -6.2032E-05 0.076859 8.5276E-05 1109.84395648496 1113.17990768959 94.801 0.54666 94.801 94.495 95.041 0 393 49 11 0 0 0 1.4911E-26 3 57510 75.261 73.936 1 1.0613 1.1777 0 68710000 28654000 40056000 32013 1813 12158 12490 49899;49900;49901 49901 SLTDPSQESHTEAISDAETSSSDISFSGIATR 32 0 1 Unmodified _SLTDPSQESHTEAISDAETSSSDISFSGIATR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1113.1788 3 1109.5096 3325.50698 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.017 1 95.018 94.518 95.518 7.6294E-06 0 0 0 1.1517E-05 1 57743 47.803 45.054 1 32014 1813 12158 12490 49902 49902 SLTDPSQESHTEAISDAETSSSDISFSGIATR 32 0 1 Unmodified _SLTDPSQESHTEAISDAETSSSDISFSGIATR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1110.1783 3 1109.5096 3325.50698 57997.07 0.3223 0.0003576 -0.10258 -0.00011381 0.21973 0.00024379 1109.84394973243 1113.51426382703 94.072 0.63034 94.072 93.769 94.4 -7.6294E-06 402 53 11 0 0 0 1.7313E-36 6 58362 100.86 100.86 1 1.0856 1.2437 0 83974000 42117000 41856000 32015 1813 12158 12490 49903;49904;49905;49906;49907;49908 49908 SLTDPSQESHTEAISDAETSSSDISFSGIATR 32 0 1 Unmodified _SLTDPSQESHTEAISDAETSSSDISFSGIATR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1109.8445 3 1109.5096 3325.50698 57453.8 0.17609 0.00019537 0.066282 7.354E-05 0.24237 0.00026891 1109.84408960682 1113.18005540944 107.97 0.67538 107.97 107.7 108.38 0 331 35 14 0 0 0 2.2265E-12 2 61850 50.261 50.261 1 1.6568 1.4283 0 70309000 25531000 44778000 32016 1813 12158 12490 49909;49910 49910 SLTDPSQESHTEAISDAETSSSDISFSGIATR 32 0 1 Unmodified _SLTDPSQESHTEAISDAETSSSDISFSGIATR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1113.1804 3 1109.5096 3325.50698 57203.64 0.11958 0.00013267 -0.086267 -9.5714E-05 0.033311 3.6959E-05 1109.84383796125 1113.17984236352 108.02 0.66198 108.02 107.74 108.4 0 290 31 14 0 0 0 4.3258E-31 1 61161 95.435 95.435 1 1.871 1.6328 0 70477000 25846000 44631000 32017 1813 12158 12490 49911 49911 SLTEYLQNVEQK 12 1 0 Unmodified _SLTEYLQNVEQK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;M1V490;M1VPF9;M1V481;B4DS27 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-ALK_K17;A20 Kinesin-like protein;Kinesin-1 heavy chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.8815 2 726.372463 1450.73037 72296.34 0.90135 0.00065472 0.16644 0.00012089 1.0678 0.00077561 726.371902993846 730.379720183857 85.47 0.50221 85.47 85.257 85.76 0 106 41 4 0 0 0 7.6188E-07 2 51324 112.36 94.921 1 1.2549 1.2788 0 13247000 3750900 9496300 32018 1186 12159 12491 49912;49913 49912 SLTEYLQNVEQK 12 1 0 Unmodified _SLTEYLQNVEQK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;M1V490;M1VPF9;M1V481;B4DS27 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-ALK_K17;A20 Kinesin-like protein;Kinesin-1 heavy chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3788 2 726.372463 1450.73037 72210.3 0.61255 0.00044494 -0.16968 -0.00012325 0.44287 0.00032169 726.37210385468 730.379466211612 84.593 0.5079 84.593 84.353 84.861 -7.6294E-06 156 42 6 0 0 0 5.0038E-06 2 51916 110.38 92.946 1 1.3122 1.3131 0 15526000 8022600 7503500 32019 1186 12159 12491 49914;49915 49914 SLTFSPDSQLLVTASDDGYIK 21 1 0 Unmodified _SLTFSPDSQLLVTASDDGYIK_ 0 0 0 H0YN81;Q9GZS3;H0YL19;H3BQA8;H0YLA1 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1129.5671 2 1129.06536 2256.11616 56738.43 0.24589 0.00027763 0.21459 0.00024229 0.46048 0.00051991 1129.56708717893 1133.57402250327 118.16 0.50549 118.16 117.93 118.43 0 189 29 10 0 0 0 2.8762E-11 3 75719 95.651 95.651 1 1.7092 1.8623 0 49593000 18186000 31407000 32020 1299 12160 12492 49916;49917;49918 49918 SLTFSPDSQLLVTASDDGYIK 21 1 0 Unmodified _SLTFSPDSQLLVTASDDGYIK_ 0 0 0 H0YN81;Q9GZS3;H0YL19;H3BQA8;H0YLA1 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1129.0668 2 1129.06536 2256.11616 57175 0.56872 0.00064213 0.073276 8.2733E-05 0.642 0.00072486 1129.56699313092 1133.57364864762 117.77 0.49206 117.77 117.53 118.02 0 237 33 10 0 0 0 2.3991E-16 2 77236 111.74 111.74 1 1.6504 1.8581 0 57428000 20107000 37321000 32021 1299 12160 12492 49919;49920 49920 SLTFSPDSQLLVTASDDGYIK 21 1 0 Unmodified _SLTFSPDSQLLVTASDDGYIK_ 0 0 0 H0YN81;Q9GZS3;H0YL19;H3BQA8;H0YLA1 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1133.5773 2 1129.06536 2256.11616 57271.04 0.080899 9.1341E-05 0.19842 0.00022403 0.27932 0.00031537 1129.56633209052 1133.57469355457 130.35 0.59462 130.35 130.06 130.66 0 172 30 10 0 0 0 1.1263E-06 3 78913 52.599 52.599 1 1.5344 1.2127 0 10604000 4300600 6303100 32022 1299 12160 12492 49921;49922;49923 49922 SLTFSPDSQLLVTASDDGYIK 21 1 0 Unmodified _SLTFSPDSQLLVTASDDGYIK_ 0 0 0 H0YN81;Q9GZS3;H0YL19;H3BQA8;H0YLA1 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1129.5656 2 1129.06536 2256.11616 57437.66 0.53083 0.00059934 -0.18086 -0.0002042 0.34997 0.00039514 1129.56627155302 1133.57369403456 130.17 0.58842 130.17 129.83 130.42 0 136 23 10 0 0 0 0.00099783 3 77893 35.1 35.1 1 1.4718 1.2126 0 10686000 4323900 6362600 32023 1299 12160 12492 49924;49925;49926 49925 SLTGVVNAQALTSAFSPHTK 20 1 0 Unmodified _SLTGVVNAQALTSAFSPHTK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1019.5495 2 1015.03928 2028.064 NaN NaN NaN 0.15628 0.00015863 NaN NaN NaN NaN 105.89 0.2962 105.89 105.74 106.04 0 0 0 0 0.025159 1 65597 31.827 23.522 1 NaN NaN 0 6529200 0 6529200 32024 1382 12161 12493 49927 49927 SLTGVVNAQALTSAFSPHTK 20 1 0 Unmodified _SLTGVVNAQALTSAFSPHTK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1019.5496 2 1015.03928 2028.064 NaN NaN NaN 0.31832 0.00032311 NaN NaN NaN NaN 105.08 0.30499 105.08 104.94 105.24 0 0 0 0 0.0011708 1 66606 45.864 39.716 1 NaN NaN 0 9705400 0 9705400 32025 1382 12161 12493 49928 49928 SLTLAR 6 0 1 Unmodified _SLTLAR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 330.7061 2 330.705589 659.396624 NaN NaN NaN -0.07772 -2.5702E-05 NaN NaN NaN NaN 31.398 0.31675 31.398 31.248 31.565 0 0 0 0 0.043573 1 15440 105.42 19.509 1 NaN NaN 0 19232000 19232000 0 32026 1933 12162 12494 49929 49929 SLTLAR 6 0 1 Unmodified _SLTLAR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 330.7064 2 330.705589 659.396624 NaN NaN NaN 0.34617 0.00011448 NaN NaN NaN NaN 30.799 0.28422 30.799 30.666 30.95 0 0 0 0 0.028811 1 15109 109.88 23.537 1 NaN NaN 0 17945000 17945000 0 32027 1933 12162 12494 49930 49930 SLTNDWEDHLAVK 13 1 0 Unmodified _SLTNDWEDHLAVK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 B4DMA2;K9JA46 B4DMA2 HSP90AB1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.5913 3 509.91945 1526.73652 84176.58 0.24644 0.00012567 0.34492 0.00017588 0.59137 0.00030155 509.919544729775 512.590914908968 77.382 1.0637 77.382 76.926 77.99 0 565 86 9 0 0 0 0.016874 2 45531 25.122 25.122 1 1.9852 2.238 0 113390000 34179000 79210000 32028 379;1348 12163 12495 49931;49932 49932 SLTNDWEDHLAVK 13 1 0 Unmodified _SLTNDWEDHLAVK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 B4DMA2;K9JA46 B4DMA2 HSP90AB1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.3853 2 764.375537 1526.73652 NaN NaN NaN 0.061307 4.6862E-05 NaN NaN NaN NaN 77.344 0.67916 77.344 77.047 77.726 0 0 0 0 0.00058888 2 45861 81.625 55.582 1 NaN NaN 0 18324000 0 18324000 32029 379;1348 12163 12495 49933;49934 49934 SLTNDWEDHLAVK 13 1 0 Unmodified _SLTNDWEDHLAVK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 B4DMA2;K9JA46 B4DMA2 HSP90AB1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.2536 3 509.91945 1526.73652 84129.9 0.136 6.9347E-05 0.42913 0.00021882 0.56513 0.00028817 509.919599416312 512.590928908989 75.937 0.93976 75.937 75.705 76.645 0 539 80 10 0 0 0 0.0013625 2 45733 48.467 43.665 1 1.9406 2.236 0 181340000 55010000 126330000 32030 379;1348 12163 12495 49935;49936 49936 SLTNDWEDHLAVK 13 1 0 Unmodified _SLTNDWEDHLAVK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 B4DMA2;K9JA46 B4DMA2 HSP90AB1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.3764 2 764.375537 1526.73652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.948 1 75.948 75.448 76.448 0 0 0 0 3.7438E-16 1 45808 120.86 95.048 1 32031 379;1348 12163 12495 49937 49937 SLTNDWEDHLAVK 13 1 0 Unmodified _SLTNDWEDHLAVK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 B4DMA2;K9JA46 B4DMA2 HSP90AB1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.3762 2 764.375537 1526.73652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.246 1 88.246 87.746 88.746 0 0 0 0 0.0016019 1 48644 71.555 47.212 1 32032 379;1348 12163 12495 49938 49938 SLTNDWEDHLAVK 13 1 0 Unmodified _SLTNDWEDHLAVK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 B4DMA2;K9JA46 B4DMA2 HSP90AB1;EL52;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.5909 3 509.91945 1526.73652 84178.96 0.34075 0.00017375 0.29097 0.00014837 0.63171 0.00032212 509.919514902135 512.590851233257 88.254 0.75916 88.254 87.989 88.748 0 238 42 9 0 0 0 0.047393 1 47714 13.717 13.717 1 1.3529 1.0826 0 21492000 8798000 12694000 32033 379;1348 12163 12495 49939 49939 SLTQSYLR 8 0 1 Unmodified _SLTQSYLR_ 0 0 0 P52948;H7C3P6 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.2674 2 484.263999 966.513445 87522.77 0.30571 0.00014804 -0.87365 -0.00042308 -0.56794 -0.00027503 484.263392655495 489.267928142217 46.611 0.62957 46.611 46.289 46.919 0 134 53 4 0 0 0 0.026448 1 25245 54.549 28.813 1 0.97301 0.99768 0 14400000 6887100 7513200 32034 1603 12164 12496 49940 49940 SLTQTFATVEVGR 13 0 1 Unmodified _SLTQTFATVEVGR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3793 2 704.875173 1407.73579 71596.8 0.66127 0.00046611 0.18191 0.00012823 0.84318 0.00059434 704.875350009674 709.879480450338 85.93 0.92099 85.93 85.531 86.452 0 425 69 10 0 0 0 4.4973E-14 2 51553 136.02 89.561 1 0.81446 0.9412 0 160350000 89198000 71149000 32035 1813 12165 12497 49941;49942 49942 SLTQTFATVEVGR 13 0 1 Unmodified _SLTQTFATVEVGR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.8755 2 704.875173 1407.73579 71637.3 0.92677 0.00065326 -0.012348 -8.7036E-06 0.91443 0.00064456 704.875071088469 709.879310377468 84.905 0.87788 84.905 84.569 85.447 7.6294E-06 491 74 10 0 0 0 1.3937E-38 2 52117 179.57 121.72 1 0.83837 0.96658 0 229880000 122960000 106920000 32036 1813 12165 12497 49943;49944 49944 SLTQTFATVEVGR 13 0 1 Unmodified _SLTQTFATVEVGR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.8798 2 704.875173 1407.73579 72069.63 0.73762 0.00051993 0.033003 2.3263E-05 0.77063 0.0005432 704.875218973368 709.87935798174 98.475 1.1685 98.475 98.059 99.227 0 412 68 9 0 0 0 0.00013155 3 55400 79.82 44.309 1 1.461 1.2328 0 29091000 11790000 17301000 32037 1813 12165 12497 49945;49946;49947 49945 SLTQTFATVEVGR 13 0 1 Unmodified _SLTQTFATVEVGR_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.3792 2 704.875173 1407.73579 72688.68 0.68266 0.00048119 0.12161 8.5721E-05 0.80427 0.00056691 704.875295078042 709.879408352503 98.408 1.0107 98.408 97.977 98.987 0 394 60 9 0 0 0 0.0001783 3 54471 71.555 46.118 1 1.4089 1.229 0 32267000 14380000 17887000 32038 1813 12165 12497 49948;49949;49950 49948 SLTSATSTSNIQSSASQPPRPQQGQVK 27 1 1 Unmodified _SLTSATSTSNIQSSASQPPRPQQGQVK_ 0 0 1 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 935.1483 3 929.140681 2784.40021 63404.29 0.6035 0.00056074 0.059071 5.4885E-05 0.66257 0.00061562 929.475312077858 935.48223612377 46.861 0.36674 46.861 46.684 47.051 0 202 34 8 0 0 0 3.7567E-16 3 25319 71.527 71.527 1 0.80177 0.94806 0 38636000 20575000 18060000 32039 1224 12166 12498 49951;49952;49953 49953 SLTSATSTSNIQSSASQPPRPQQGQVK 27 1 1 Unmodified _SLTSATSTSNIQSSASQPPRPQQGQVK_ 0 0 1 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.4744 3 929.140681 2784.40021 62924.35 0.61267 0.00056926 -0.019214 -1.7853E-05 0.59346 0.0005514 929.475265512163 935.148235267934 45.63 0.3593 45.63 45.467 45.826 0 202 31 10 0 0 0 7.2409E-35 2 25027 120.64 120.64 1 0.78956 0.92184 0 47580000 28502000 19077000 32040 1224 12166 12498 49954;49955 49955 SLTSATSTSNIQSSASQPPRPQQGQVK 27 1 1 Unmodified _SLTSATSTSNIQSSASQPPRPQQGQVK_ 0 0 1 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 935.4814 3 929.140681 2784.40021 63036.14 0.64714 0.00060129 -0.22073 -0.00020509 0.42642 0.0003962 929.474764326094 935.482280510925 55.111 0.50861 55.111 54.854 55.363 0 266 34 10 0 0 0 0.028003 1 27482 18.776 16.127 1 1.7182 1.4552 0 8347300 2930100 5417200 32041 1224 12166 12498 49956 49956 SLTSATSTSNIQSSASQPPRPQQGQVK 27 1 1 Unmodified _SLTSATSTSNIQSSASQPPRPQQGQVK_ 0 0 1 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 935.4821 3 929.140681 2784.40021 62254.14 0.43957 0.00040843 -0.022491 -2.0898E-05 0.41708 0.00038753 929.475077153136 935.482421539594 55.797 0.51922 55.797 55.537 56.056 0 252 32 10 0 0 0 1.7911E-06 2 27325 41.087 34.654 1 1.7486 1.473 0 8124200 2674700 5449400 32042 1224 12166 12498 49957;49958 49957 SLTVIPYK 8 1 0 Unmodified _SLTVIPYK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.7831 2 460.776211 919.537869 89885.44 0.1721 7.9298E-05 0.45547 0.00020987 0.62757 0.00028917 460.776201111396 464.783228627443 72.585 0.65337 72.585 72.389 73.043 7.6294E-06 177 47 7 0 0 0 0.010479 2 42449 72.138 32.035 1 1.1446 1.2933 0 141670000 75893000 65773000 32043 2042 12167 12499 49959;49960 49959 SLTVIPYK 8 1 0 Unmodified _SLTVIPYK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.7831 2 460.776211 919.537869 88397.19 0.071406 3.2902E-05 0.29562 0.00013621 0.36703 0.00016912 460.776212027549 464.783163286223 71.24 0.41014 71.24 71.068 71.478 0 144 28 7 0 0 0 0.013679 2 42637 64.757 24.654 1 1.0373 1.1917 0 171580000 82156000 89428000 32044 2042 12167 12499 49961;49962 49961 SLTVIPYK 8 1 0 Unmodified _SLTVIPYK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.7831 2 460.776211 919.537869 88660.52 0.21079 9.7126E-05 0.15656 7.2139E-05 0.36735 0.00016927 460.776199527824 464.783261198927 83.031 0.82927 83.031 82.626 83.456 0 188 49 8 0 0 0 0.055747 1 45149 41.652 1.5492 1 1.3227 1.0288 0 15447000 6446300 9000800 32045 2042 12167 12499 49963 49963 SLTVIPYK 8 1 0 Unmodified _SLTVIPYK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 464.7828 2 460.776211 919.537869 88616.69 0.14017 6.4585E-05 0.069836 3.2179E-05 0.21 9.6764E-05 460.776119802444 464.783147127227 83.104 0.90195 83.104 82.617 83.519 -7.6294E-06 209 52 8 0 0 0 0.038748 1 44350 47.849 7.7455 1 1.3311 1.1003 0 11778000 4833800 6944200 32046 2042 12167 12499 49964 49964 SLTYLSILR 9 0 1 Unmodified _SLTYLSILR_ 0 0 0 Q53G61;Q53G21;P09661;H0YMA0;H0YKK0;Q6NVW9 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.3188 2 533.318774 1064.623 83326.7 0.64602 0.00034454 -0.71555 -0.00038161 -0.069524 -3.7079E-05 533.318588795291 538.322249495635 107.72 0.73833 107.72 107.4 108.14 7.6294E-06 169 55 5 0 0 0 0.010479 3 66996 59.245 53.775 1 1.3298 1.3542 0 14847000 5630900 9216300 32047 1461 12168 12500 49965;49966;49967 49967 SLTYLSILR 9 0 1 Unmodified _SLTYLSILR_ 0 0 0 Q53G61;Q53G21;P09661;H0YMA0;H0YKK0;Q6NVW9 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.3228 2 533.318774 1064.623 84673.26 0.61902 0.00033014 -0.81279 -0.00043348 -0.19377 -0.00010334 533.318570049468 538.322095430912 106.97 0.70911 106.97 106.66 107.37 0 191 49 6 0 0 0 0.0036023 4 68083 71.379 71.379 1 1.5518 1.5553 0 17254000 7195300 10059000 32048 1461 12168 12500 49968;49969;49970;49971 49969 SLTYLSILR 9 0 1 Unmodified _SLTYLSILR_ 0 0 0 Q53G61;Q53G21;P09661;H0YMA0;H0YKK0;Q6NVW9 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.3229 2 533.318774 1064.623 84882.65 0.8105 0.00043225 -0.41008 -0.0002187 0.40042 0.00021355 533.31878558776 538.322398948849 119.25 0.53298 119.25 119 119.53 -7.6294E-06 63 21 4 0 0 0 0.04753 2 70528 39.022 39.022 1 1.0377 0.89982 0 2080900 874920 1206000 32049 1461 12168 12500 49972;49973 49972 SLTYLSILR 9 0 1 Unmodified _SLTYLSILR_ 0 0 0 Q53G61;Q53G21;P09661;H0YMA0;H0YKK0;Q6NVW9 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.3192 2 533.318774 1064.623 85573.36 0.71059 0.00037897 -0.30776 -0.00016413 0.40284 0.00021484 533.81991285224 538.322701722939 119.01 0.44131 119.01 118.79 119.23 0 54 16 5 0 0 0 0.04753 2 69460 39.022 39.022 1 0.88644 0.75897 0 3300200 1544400 1755800 32050 1461 12168 12500 49974;49975 49974 SLVAFEGEGQFEK 13 1 0 Unmodified _SLVAFEGEGQFEK_ 0 0 0 O96028;Q05CW4;D6R9V2 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.3555 2 720.853906 1439.69326 72211.02 0.96721 0.00069721 -0.53308 -0.00038427 0.43413 0.00031294 720.853320696858 724.860610300061 96.447 0.66219 96.447 96.072 96.734 -7.6294E-06 224 40 7 0 0 0 0.00028723 2 54122 66.262 48.398 1 2.0655 1.6015 0 13800000 5301500 8498900 32051 1435 12169 12501 49976;49977 49976 SLVAFEGEGQFEK 13 1 0 Unmodified _SLVAFEGEGQFEK_ 0 0 0 O96028;Q05CW4;D6R9V2 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.355 2 720.853906 1439.69326 71825.87 0.52951 0.0003817 -0.48895 -0.00035246 0.040556 2.9235E-05 720.853337853868 724.860657134325 96.28 0.70999 96.28 95.989 96.699 0 229 42 8 0 0 0 0.00012689 1 53247 78.653 61.217 1 2.1966 1.8099 0 10707000 3566400 7140400 32052 1435 12169 12501 49978 49978 SLVALLVETQMK 12 1 0 Oxidation (M) _SLVALLVETQM(ox)K_ SLVALLVETQM(1)K SLVALLVETQM(84.66)K 0 1 0 Q58EY4;Q92922;B4DYQ1;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.3813 2 674.381245 1346.74794 75531.41 1.0566 0.00071253 0.64957 0.00043806 1.7061 0.0011506 674.381150033994 678.38920665455 108.73 0.78515 108.73 108.45 109.24 7.6294E-06 203 52 6 0 0 0 0.00011099 1 67864 84.658 84.658 1 1.0097 0.99329 0 23797000 12515000 11283000 32053 1798;321 12170 12502 49979 49979 246 SLVALLVETQMK 12 1 0 Oxidation (M) _SLVALLVETQM(ox)K_ SLVALLVETQM(1)K SLVALLVETQM(104.79)K 0 1 0 Q58EY4;Q92922;B4DYQ1;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.3818 2 674.381245 1346.74794 74921.53 0.67065 0.00045227 0.18915 0.00012756 0.85979 0.00057983 674.380907307207 678.388728672052 108.06 0.67568 108.06 107.81 108.48 0 205 48 6 0 0 0 8.235E-06 1 69041 104.79 104.79 1 1.1111 1.1538 0 18875000 9044700 9830400 32054 1798;321 12170 12502 49980 49980 246 SLVALLVETQMK 12 1 0 Oxidation (M) _SLVALLVETQM(ox)K_ SLVALLVETQM(1)K SLVALLVETQM(72.85)K 0 1 0 Q58EY4;Q92922;B4DYQ1;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.3812 2 674.381245 1346.74794 74582.3 0.51345 0.00034626 0.93566 0.00063099 1.4491 0.00097725 674.381388532446 678.389621426962 120.41 0.68033 120.41 119.94 120.62 -7.6294E-06 74 29 4 0 0 0 0.00015133 1 71456 72.848 68.064 1 1.5164 1.2424 0 2528400 1103300 1425100 32055 1798;321 12170 12502 49981 49981 246 SLVALLVETQMK 12 1 0 Oxidation (M) _SLVALLVETQM(ox)K_ SLVALLVETQM(1)K SLVALLVETQM(65.06)K 0 1 0 Q58EY4;Q92922;B4DYQ1;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.3832 2 674.381245 1346.74794 76643.15 0.82843 0.00055868 0.79473 0.00053595 1.6232 0.0010946 674.381346357961 678.389259781316 120.13 0.68732 120.13 119.7 120.39 0 77 30 4 0 0 0 0.00040615 1 70344 65.056 60.272 1 1.4328 1.1237 0 3322100 1400600 1921500 32056 1798;321 12170 12502 49982 49982 246 SLVALLVETQMK 12 1 0 Unmodified _SLVALLVETQMK_ 0 0 0 Q58EY4;Q92922;B4DYQ1;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.3837 2 666.383788 1330.75302 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.67 1 117.67 117.17 118.17 0 0 0 0 0.00082341 1 77232 90.108 34.559 1 32057 1798;321 12170 12503 49983 49983 SLVDLTAVDVPTR 13 0 1 Unmodified _SLVDLTAVDVPTR_ 0 0 0 Q9UF24;O75489;Q53FM7;E9PS48 Q9UF24 Q9UF24 DKFZp586K0821;NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.3894 2 693.385374 1384.75619 77281.66 0.78348 0.00054326 -0.13615 -9.4403E-05 0.64734 0.00044885 693.384992100592 698.389019506473 104.21 0.46683 104.21 103.99 104.46 -7.6294E-06 132 37 5 0 0 0 0.00012284 1 66029 77.64 77.64 1 1.7211 1.71 0 7396800 3400100 3996600 32058 1406 12171 12504 49984 49984 SLVEASSSGVSVLSLCEK 18 1 0 Unmodified _SLVEASSSGVSVLSLCEK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08;F8VR77;H0YIN7;F8W0A3 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 930.4795 2 926.472048 1850.92954 NaN NaN NaN 0.21194 0.00019635 NaN NaN NaN NaN 101.18 0.46544 101.18 100.96 101.43 -7.6294E-06 0 0 0 3.1156E-06 1 63593 76.262 60.723 1 NaN NaN 0 5283400 0 5283400 32059 328 12172 12505 49985 49985 SLVEASSSGVSVLSLCEK 18 1 0 Unmodified _SLVEASSSGVSVLSLCEK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08;F8VR77;H0YIN7;F8W0A3 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 930.4778 2 926.472048 1850.92954 NaN NaN NaN -0.36786 -0.00034081 NaN NaN NaN NaN 113.94 0.33752 113.94 113.81 114.15 0 0 0 0 0.013767 1 65524 40.278 26.615 1 NaN NaN 0 3396200 0 3396200 32060 328 12172 12505 49986 49986 SLVEIIEHGLVDEQQK 16 1 0 Unmodified _SLVEIIEHGLVDEQQK_ 0 0 0 O75533;Q7Z497 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.6677 3 612.994907 1835.96289 77604.86 0.50434 0.00030915 0.059141 3.6253E-05 0.56348 0.00034541 613.328961931123 615.666389318836 112.96 0.7021 112.96 112.62 113.33 0 127 47 5 0 0 0 0.00087646 2 73018 39.143 39.143 1 0.49939 0.51189 0 17625000 11753000 5872400 32061 1408 12173 12506 49987;49988 49987 SLVEIIEHGLVDEQQK 16 1 0 Unmodified _SLVEIIEHGLVDEQQK_ 0 0 0 O75533;Q7Z497 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.9963 3 612.994907 1835.96289 76354.87 0.57809 0.00035437 0.24172 0.00014817 0.81981 0.00050254 612.995454787197 615.666343539978 124.25 0.77593 124.25 123.97 124.75 0 97 32 7 0 0 0 0.0008947 2 74381 38.889 38.889 1 0.64954 0.50584 0 3730300 2077600 1652800 32062 1408 12173 12506 49989;49990 49990 SLVEIIEHGLVDEQQK 16 1 0 Unmodified _SLVEIIEHGLVDEQQK_ 0 0 0 O75533;Q7Z497 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.6666 3 612.994907 1835.96289 77059.61 0.60975 0.00037378 0.33251 0.00020383 0.94226 0.0005776 612.995252387176 616.000761332712 123.98 0.48867 123.98 123.84 124.33 -7.6294E-06 50 18 5 0 0 0 0.0069154 2 73342 27.496 27.496 1 0.85859 0.70302 0 5435900 3053300 2382600 32063 1408 12173 12506 49991;49992 49992 SLVGGLLQSK 10 1 0 Unmodified _SLVGGLLQSK_ 0 0 0 P52948;H7C3P6;A0A024RCC4 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.3106 2 501.303124 1000.5917 89103.63 0.8531 0.00042766 -0.59794 -0.00029975 0.25516 0.00012791 501.302655932513 505.309963297477 80.806 0.56003 80.806 80.518 81.079 0 146 48 4 0 0 0 0.031518 1 47966 42.19 8.928 1 1.6852 1.7617 0 11923000 4509600 7413300 32064 1603 12174 12507 49993 49993 SLVGGLLQSK 10 1 0 Unmodified _SLVGGLLQSK_ 0 0 0 P52948;H7C3P6;A0A024RCC4 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.3102 2 501.303124 1000.5917 87091.35 0.52802 0.0002647 -0.33938 -0.00017013 0.18863 9.4563E-05 501.302838793925 505.310047288032 79.567 0.53815 79.567 79.312 79.85 0 124 43 4 0 0 0 0.025233 1 48270 44.719 13.646 1 1.4418 1.5097 0 10580000 3321000 7259100 32065 1603 12174 12507 49994 49994 SLVGLGGTK 9 1 0 Unmodified _SLVGLGGTK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2502 2 416.25036 830.486168 NaN NaN NaN -0.19509 -8.1207E-05 NaN NaN NaN NaN 45.89 1.0104 45.89 45.6 46.611 3.8147E-06 0 0 0 0.018019 1 24714 60.436 12.588 1 NaN NaN 0 71612000 71612000 0 + 32066 1166 12175 12508 49995 49995 SLVGLGGTK 9 1 0 Unmodified _SLVGLGGTK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2495 2 416.25036 830.486168 NaN NaN NaN -0.36611 -0.00015239 NaN NaN NaN NaN 45.168 0.98347 45.168 44.757 45.74 0 0 0 0 0.019405 1 24624 59.35 1.8863 1 NaN NaN 0 78962000 78962000 0 + 32067 1166 12175 12508 49996 49996 SLVGLGGTK 9 1 0 Unmodified _SLVGLGGTK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 416.2503 2 416.25036 830.486168 NaN NaN NaN 0.52312 0.00021775 NaN NaN NaN NaN 52.475 0.87369 52.475 51.926 52.8 0 0 0 0 0.03378 1 25827 52.255 4.4064 1 NaN NaN 0 10046000 10046000 0 + 32068 1166 12175 12508 49997 49997 SLVGLQEELLFQYPDTR 17 0 1 Unmodified _SLVGLQEELLFQYPDTR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1005.0243 2 1004.52293 2007.03131 60944.84 0.56778 0.00057035 0.10109 0.00010154 0.66887 0.00067189 1005.02467038038 1009.52764405575 123.54 0.65727 123.54 123.24 123.9 0 328 47 11 0 0 0 2.5164E-25 2 80038 145.17 145.17 1 1 1.0846 0 49863000 24803000 25060000 32069 2080 12176 12509 49998;49999 49998 SLVGLQEELLFQYPDTR 17 0 1 Unmodified _SLVGLQEELLFQYPDTR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1005.028 2 1004.52293 2007.03131 60923.84 0.84363 0.00084744 -0.083536 -8.3913E-05 0.76009 0.00076353 1005.02447852217 1010.02883210476 123.1 0.77917 123.1 122.82 123.6 -7.6294E-06 387 57 10 0 0 0 2.6625E-18 3 81619 134.04 134.04 1 1.0399 1.2089 0 62822000 31949000 30873000 32070 2080 12176 12509 50000;50001;50002 50002 SLVGLQEELLFQYPDTR 17 0 1 Unmodified _SLVGLQEELLFQYPDTR_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1004.523 2 1004.52293 2007.03131 NaN NaN NaN 0.48721 0.00048941 NaN NaN NaN NaN 134.49 0.14383 134.49 134.41 134.56 0 0 0 0 7.5966E-07 1 81284 86.291 78.535 1 NaN NaN 0 40773000 40773000 0 32071 2080 12176 12509 50003 50003 SLVHDLFQK 9 1 0 Unmodified _SLVHDLFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.8084 2 543.800749 1085.58694 81666.57 0.46402 0.00025233 0.1538 8.3637E-05 0.61782 0.00033597 543.800666670334 547.807880648146 69.597 1.7161 69.597 68.998 70.714 0 653 149 7 0 0 0 2.059E-06 4 40245 135.83 99.435 1 0.84921 0.95753 0 129850000 68686000 61161000 32072 2070 12177 12510 50004;50005;50006;50007 50005 SLVHDLFQK 9 1 0 Unmodified _SLVHDLFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.5411 3 362.869591 1085.58694 99648.55 -0.11975 -4.3452E-05 -0.25791 -9.3589E-05 -0.37766 -0.00013704 362.869438036513 365.540965476858 69.645 0.78406 69.645 69.182 69.967 0 171 67 4 0 0 0 0.040473 1 40480 23.054 14.295 1 0.76786 0.76979 0 18697000 11019000 7677800 32073 2070 12177 12510 50008 50008 SLVHDLFQK 9 1 0 Unmodified _SLVHDLFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.8078 2 543.800749 1085.58694 NaN NaN NaN -0.18811 -0.00010229 NaN NaN NaN NaN 66.811 1.198 66.811 66.298 67.496 0 0 0 0 1.3591E-11 1 39449 140.5 105.69 1 NaN NaN 0 70710000 0 70710000 32074 2070 12177 12510 50009 50009 SLVHDLFQK 9 1 0 Unmodified _SLVHDLFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.8013 2 543.800749 1085.58694 NaN NaN NaN -0.34431 -0.00018724 NaN NaN NaN NaN 76.911 0.76997 76.911 76.481 77.251 0 0 0 0 0.0013427 1 41108 86.67 58.496 1 NaN NaN 0 19818000 19818000 0 32075 2070 12177 12510 50010 50010 SLVHDLFQK 9 1 0 Unmodified _SLVHDLFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.8076 2 543.800749 1085.58694 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.674 1 76.674 76.174 77.174 0 0 0 0 4.7399E-06 1 40932 115.71 71.907 1 32076 2070 12177 12510 50011 50011 SLVHDLFQK 9 1 0 Unmodified _SLVHDLFQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.8077 2 543.800749 1085.58694 82407.77 0.44989 0.00024465 0.011041 6.004E-06 0.46094 0.00025066 543.800580380954 547.807839765484 76.74 1.5959 76.74 76.309 77.905 0 396 107 7 0 0 0 0.00060281 2 39981 96.948 72.992 1 1.7328 1.4433 0 40242000 13576000 26666000 32077 2070 12177 12510 50012;50013 50012 SLVMHTPPVLK 11 1 0 Oxidation (M) _SLVM(ox)HTPPVLK_ SLVM(1)HTPPVLK SLVM(114.5)HTPPVLK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.3602 2 619.352291 1236.69003 77104.3 0.90393 0.00055985 0.044255 2.741E-05 0.94818 0.00058726 619.352270797584 623.359454253765 49.409 0.33372 49.409 49.316 49.649 0 91 20 7 0 0 0 3.3156E-08 2 27110 114.5 88.937 1 2.5178 2.8298 0 69951000 18837000 51115000 32078 1569;1864 12178 12511 50014;50015 50014 1341 SLVMHTPPVLK 11 1 0 Oxidation (M) _SLVM(ox)HTPPVLK_ SLVM(1)HTPPVLK SLVM(69.01)HTPPVLK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.239 3 413.237286 1236.69003 93705.52 0.50011 0.00020667 0.47043 0.0001944 0.97054 0.00040106 413.237483067862 415.90869137903 49.407 0.40157 49.407 49.283 49.685 0 102 24 7 0 0 0 0.00031447 1 27148 69.01 69.01 1 2.7404 3.0948 0 107890000 28718000 79175000 32079 1569;1864 12178 12511 50016 50016 1341 SLVMHTPPVLK 11 1 0 Oxidation (M) _SLVM(ox)HTPPVLK_ SLVM(1)HTPPVLK SLVM(53.76)HTPPVLK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.3594 2 619.352291 1236.69003 77264.18 0.79412 0.00049184 0.049926 3.0922E-05 0.84405 0.00052276 619.352533390429 623.359487745105 49.942 1.0192 49.942 49.565 50.585 0 182 88 5 0 0 0 0.0032943 1 27716 53.756 38.606 1 2.1147 2.2856 0 42634000 15933000 26701000 32080 1569;1864 12178 12511 50017 50017 1341 SLVMHTPPVLK 11 1 0 Oxidation (M) _SLVM(ox)HTPPVLK_ SLVM(1)HTPPVLK SLVM(57.86)HTPPVLK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3534 2 619.352291 1236.69003 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.228 1 50.228 49.728 50.728 -3.8147E-06 0 0 0 0.0050803 1 27709 57.859 32.936 1 32081 1569;1864 12178 12511 50018 50018 1341 SLVMHTPPVLK 11 1 0 Oxidation (M) _SLVM(ox)HTPPVLK_ SLVM(1)HTPPVLK SLVM(147.2)HTPPVLK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.3605 2 619.352291 1236.69003 77417.48 0.28969 0.00017942 0.096855 5.9987E-05 0.38654 0.0002394 619.352375114295 623.359411670971 47.599 1.0624 47.599 47.443 48.505 -3.8147E-06 238 74 4 0 0 0 3.7222E-13 4 26428 147.2 147.2 1 2.2518 2.5199 0 109300000 33388000 75909000 32082 1569;1864 12178 12511 50019;50020;50021;50022 50019 1341 SLVMHTPPVLK 11 1 0 Oxidation (M) _SLVM(ox)HTPPVLK_ SLVM(1)HTPPVLK SLVM(69.01)HTPPVLK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.2373 3 413.237286 1236.69003 90651.82 0.055116 2.2776E-05 1.044 0.00043143 1.0991 0.0004542 413.237294262845 415.908626691435 47.611 1.2293 47.611 47.354 48.583 -3.8147E-06 295 86 7 0 0 0 0.00031447 2 26453 69.01 69.01 1 2.8174 3.2419 0 176310000 54515000 121790000 32083 1569;1864 12178 12511 50023;50024 50024 1341 SLVMHTPPVLK 11 1 0 Oxidation (M) _SLVM(ox)HTPPVLK_ SLVM(1)HTPPVLK SLVM(68.66)HTPPVLK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 623.3594 2 619.352291 1236.69003 77501.62 0.55144 0.00034154 -0.01575 -9.7548E-06 0.53569 0.00033178 619.352298750591 623.359343426658 56.579 0.49804 56.579 56.338 56.836 0 139 30 6 0 0 0 0.00062374 1 28500 68.657 68.657 1 2.5758 2.0401 0 4920200 1246200 3674000 32084 1569;1864 12178 12511 50025 50025 1341 SLVMHTPPVLK 11 1 0 Oxidation (M) _SLVM(ox)HTPPVLK_ SLVM(1)HTPPVLK SLVM(107.21)HTPPVLK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.3602 2 619.352291 1236.69003 76420.29 0.57743 0.00035763 0.0062597 3.877E-06 0.58369 0.00036151 619.352213985707 623.359301330767 56.743 0.42881 56.743 56.5 56.929 0 150 32 6 0 0 0 6.8493E-06 2 27950 107.21 87.934 1 2.6979 2.2127 0 5311800 1470900 3840900 32085 1569;1864 12178 12511 50026;50027 50026 1341 SLVMHTPPVLK 11 1 0 Unmodified _SLVMHTPPVLK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.3626 2 611.354834 1220.69511 77291.98 0.36111 0.00022076 0.60413 0.00036934 0.96524 0.0005901 611.355299225915 615.362270396762 78.589 0.52787 78.589 78.355 78.883 0 168 33 7 0 0 0 0.040955 1 42123 35.944 30.978 1 3.8564 3.0561 0 10327000 2019900 8307000 32086 1569;1864 12178 12512 50028 50028 SLVMHTPPVLK 11 1 0 Unmodified _SLVMHTPPVLK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 615.3617 2 611.354834 1220.69511 78028.71 0.47566 0.0002908 -0.042567 -2.6023E-05 0.43309 0.00026477 611.354820475665 615.361912102458 78.524 0.62068 78.524 78.277 78.898 -7.6294E-06 181 41 7 0 0 0 2.8396E-05 1 41278 101.65 101.65 1 3.6349 2.9784 0 8692200 1913200 6779000 32087 1569;1864 12178 12512 50029 50029 SLVNLGGSK 9 1 0 Unmodified _SLVNLGGSK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.7534 2 437.753267 873.491981 NaN NaN NaN -0.27429 -0.00012007 NaN NaN NaN NaN 46.116 1.4998 46.116 45.511 47.011 0 0 0 0 1.0901E-05 1 25214 114.5 48.411 1 NaN NaN 0 833590000 833590000 0 + 32088 1308;1309 12179 12513 50030 50030 SLVNLGGSK 9 1 0 Unmodified _SLVNLGGSK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 437.7527 2 437.753267 873.491981 NaN NaN NaN -0.11501 -5.0348E-05 NaN NaN NaN NaN 53.734 2.3831 53.734 53.196 55.579 0 0 0 0 0.03828 2 25979 50.805 23.637 1 NaN NaN 0 44794000 44794000 0 + 32089 1308;1309 12179 12513 50031;50032 50031 SLVPAAELLESR 12 0 1 Unmodified _SLVPAAELLESR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.8662 2 642.861534 1283.70852 73848.73 0.67191 0.00043194 -0.56054 -0.00036035 0.11137 7.1597E-05 642.861464143294 647.865591506662 103.97 1.071 103.97 103.45 104.52 0 457 86 8 0 0 0 1.7582E-05 3 63994 104.52 69.299 1 1.7522 1.8964 0 49221000 17775000 31446000 32090 1754 12180 12514 50033;50034;50035 50034 SLVPAAELLESR 12 0 1 Unmodified _SLVPAAELLESR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.8655 2 642.861534 1283.70852 74848.41 0.77695 0.00049947 -0.54893 -0.00035288 0.22803 0.00014659 642.861380345655 647.865581782173 103.11 1.0919 103.11 102.78 103.87 0 427 89 8 0 0 0 1.7582E-05 4 65095 104.52 69.299 1 1.7497 1.9895 0 120340000 43410000 76933000 32091 1754 12180 12514 50036;50037;50038;50039 50037 SLVPAAELLESR 12 0 1 Unmodified _SLVPAAELLESR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.8676 2 642.861534 1283.70852 74917.71 1.1335 0.00072866 -0.54454 -0.00035006 0.58893 0.0003786 642.861998320547 647.865890134898 115.83 0.76673 115.83 115.35 116.12 0 152 35 8 0 0 0 0.00094953 2 67834 63.408 41.415 1 2.3752 1.9396 0 14336000 4418300 9917600 32092 1754 12180 12514 50040;50041 50040 SLVPAAELLESR 12 0 1 Unmodified _SLVPAAELLESR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.8663 2 642.861534 1283.70852 74040.56 0.81859 0.00052624 -0.72512 -0.00046615 0.093465 6.0085E-05 642.86139782608 647.86563076639 115.65 0.8035 115.65 115.39 116.19 0 158 38 8 0 0 0 0.003055 3 66817 57.019 29.69 1 2.5822 2.087 0 11518000 3408400 8109300 32093 1754 12180 12514 50042;50043;50044 50044 SLVQEMVGSFGK 12 1 0 Oxidation (M) _SLVQEM(ox)VGSFGK_ SLVQEM(1)VGSFGK SLVQEM(102.52)VGSFGK 0 1 0 O75643;A4FU77;Q9H8B9;Q5ZF01 O75643 O75643 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.334 2 649.32647 1296.63839 76099.16 0.60306 0.00039158 -0.24342 -0.00015806 0.35964 0.00023352 649.326691343144 653.333430466507 67.273 0.72793 67.273 66.745 67.473 0 171 56 5 0 0 0 1.0598E-05 3 38651 102.52 94.303 1 1.8444 1.9168 0 16934000 6965200 9968600 32094 1411 12181 12515 50045;50046;50047 50045 1100 SLVQEMVGSFGK 12 1 0 Oxidation (M) _SLVQEM(ox)VGSFGK_ SLVQEM(1)VGSFGK SLVQEM(48.74)VGSFGK 0 1 0 O75643;A4FU77;Q9H8B9;Q5ZF01 O75643 O75643 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.3271 2 649.32647 1296.63839 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.054 1 67.054 66.554 67.554 0 0 0 0 0.011357 1 38724 48.741 28.412 1 32095 1411 12181 12515 50048 50048 1100 SLVQEMVGSFGK 12 1 0 Oxidation (M) _SLVQEM(ox)VGSFGK_ SLVQEM(1)VGSFGK SLVQEM(110.39)VGSFGK 0 1 0 O75643;A4FU77;Q9H8B9;Q5ZF01 O75643 O75643 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3339 2 649.32647 1296.63839 NaN NaN NaN 0.088931 5.7745E-05 NaN NaN NaN NaN 65.888 0.37634 65.888 65.647 66.023 0 0 0 0 8.6051E-09 1 38882 110.39 54.838 1 NaN NaN 0 14188000 0 14188000 32096 1411 12181 12515 50049 50049 1100 SLVQEMVGSFGK 12 1 0 Unmodified _SLVQEMVGSFGK_ 0 0 0 O75643;A4FU77;Q9H8B9;Q5ZF01 O75643 O75643 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.3286 2 641.329013 1280.64347 NaN NaN NaN -0.98149 -0.00062946 NaN NaN NaN NaN 117.57 0.54218 117.57 117.28 117.82 7.6294E-06 0 0 0 0.0085972 1 68440 56.404 32.25 1 NaN NaN 0 1297300 1297300 0 32097 1411 12181 12516 50050 50050 SLVSAPTQILAQFPK 15 1 0 Unmodified _SLVSAPTQILAQFPK_ 0 0 0 B4E1Z2;Q7Z589 B4E1Z2 B4E1Z2 EMSY Protein EMSY MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.9604 2 800.458873 1598.90319 73115.23 0.97812 0.00078295 -0.15343 -0.00012282 0.82469 0.00066013 800.96005915338 804.465926408 119.7 0.39304 119.7 119.53 119.92 0 82 25 5 0 0 0 0.0010921 2 77060 48.741 48.741 1 0.52143 0.55517 0 3672900 2238800 1434100 32098 1069 12182 12517 50051;50052 50051 SLVSAPTQILAQFPK 15 1 0 Unmodified _SLVSAPTQILAQFPK_ 0 0 0 B4E1Z2;Q7Z589 B4E1Z2 B4E1Z2 EMSY Protein EMSY MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.4683 2 800.458873 1598.90319 69746.96 0.94802 0.00075885 -0.21771 -0.00017427 0.73031 0.00058458 800.959987940134 804.46665731101 119.2 0.3501 119.2 119.01 119.36 7.6294E-06 89 23 7 0 0 0 0.00064413 2 78541 53.08 53.08 1 0.75432 0.75977 0 7224000 4045500 3178500 32099 1069 12182 12517 50053;50054 50054 SLVSGLIR 8 0 1 Unmodified _SLVSGLIR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.7704 2 422.766178 843.517802 97111.15 0.38364 0.00016219 0.15187 6.4205E-05 0.5355 0.00022639 422.766171945683 427.770321365829 80.678 0.54411 80.678 80.373 80.917 0 154 46 4 0 0 0 0.030669 1 47897 51.787 8.6637 1 1.9389 1.9987 0 14059000 4616500 9442600 32100 1205 12183 12518 50055 50055 SLVSGLIR 8 0 1 Unmodified _SLVSGLIR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 427.7699 2 422.766178 843.517802 95498.98 0.1157 4.8915E-05 0.15207 6.4289E-05 0.26777 0.0001132 422.766147760051 427.770342362945 79.327 0.58526 79.327 79.072 79.657 0 143 46 4 0 0 0 0.027969 2 48090 53.554 8.8622 1 1.9635 1.9461 0 15718000 5733600 9984700 32101 1205 12183 12518 50056;50057 50056 SLVSKGTLVQTK 12 2 0 Unmodified _SLVSKGTLVQTK_ 0 0 1 Q4VB24;B2R984;A3R0T8;P10412;P16402;Q02539;P16403;P16401 Q4VB24;P16403;P16401 P16401 HIST1H1E;HIST1H1D;HIST1H1A;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.3;Histone H1.1;Histone H1.2;Histone H1.5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8798 2 630.879727 1259.7449 79569.14 0.81355 0.00051325 0.072503 4.5741E-05 0.88605 0.00055899 630.879424959605 638.894049811516 35.078 0.21104 35.078 34.964 35.175 0 56 18 4 0 0 0 0.0087041 1 17857 60.691 43.255 1 0.99052 1.1301 0 12258000 5681900 6576400 32102 1489;656;1490 12184 12519 50058 50058 SLVSVTK 7 1 0 Unmodified _SLVSVTK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;Q58FF8 B4DMA2;Q58FF8 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 367.2272 2 367.226354 732.438155 NaN NaN NaN 0.14371 5.2773E-05 NaN NaN NaN NaN 32.016 0.60676 32.016 31.813 32.419 0 0 0 0 0.015867 1 15871 104.21 18.944 1 NaN NaN 0 32926000 32926000 0 32103 379;1800 12185 12520 50059 50059 SLVSVTK 7 1 0 Unmodified _SLVSVTK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;Q58FF8 B4DMA2;Q58FF8 B4DMA2 HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 371.2345 2 367.226354 732.438155 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.895 1 31.895 31.395 32.395 -1.9073E-06 0 0 0 0.013442 1 15853 84.244 19.44 1 32104 379;1800 12185 12520 50060 50060 SLWQQPSVGDILR 13 0 1 Unmodified _SLWQQPSVGDILR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.9076 2 749.904265 1497.79398 NaN NaN NaN -0.1273 -9.5464E-05 NaN NaN NaN NaN 111.4 0.40964 111.4 111.19 111.6 0 0 0 0 0.0017293 1 70010 73.885 59.466 1 NaN NaN 0 4769000 0 4769000 32105 1392 12186 12521 50061 50061 SLWQQPSVGDILR 13 0 1 Unmodified _SLWQQPSVGDILR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.4057 2 749.904265 1497.79398 NaN NaN NaN 1.369 0.0010266 NaN NaN NaN NaN 111.41 0.64103 111.41 111.12 111.77 7.6294E-06 0 0 0 0.0024793 1 70064 87.568 60.239 1 NaN NaN 0 4704800 4704800 0 32106 1392 12186 12521 50062 50062 SLWQQPSVGDILR 13 0 1 Unmodified _SLWQQPSVGDILR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.909 2 749.904265 1497.79398 70417.1 0.56552 0.00042409 0.20681 0.00015509 0.77233 0.00057918 749.905002847276 754.908696438563 110.81 0.43912 110.81 110.56 111 0 96 33 4 0 0 0 0.00029891 1 71286 65.695 65.695 1 0.95329 0.9597 0 10809000 5852200 4956300 32107 1392 12186 12521 50063 50063 SLWQQPSVGDILR 13 0 1 Unmodified _SLWQQPSVGDILR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 754.908 2 749.904265 1497.79398 71205.16 0.98105 0.0007357 -1.4996 -0.0011245 -0.51851 -0.00038883 749.904771542118 754.907919462725 122.44 0.60722 122.44 122.11 122.72 -7.6294E-06 105 29 7 0 0 0 0.00012908 1 73025 79.201 79.201 1 1.2983 1.0861 0 3874700 1712100 2162600 32108 1392 12186 12521 50064 50064 SLWQQPSVGDILR 13 0 1 Unmodified _SLWQQPSVGDILR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.9062 2 749.904265 1497.79398 71599.59 0.8423 0.00063164 -0.68699 -0.00051517 0.15531 0.00011647 749.904736936495 754.907496796476 122.3 0.4406 122.3 122.07 122.51 7.6294E-06 65 22 5 0 0 0 0.056167 1 71960 27.914 25.294 1 1.0786 0.89487 0 5247300 2354600 2892700 32109 1392 12186 12521 50065 50065 SLYASSPGGVYATR 14 0 1 Unmodified _SLYASSPGGVYATR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.8597 2 714.859523 1427.70449 72323.48 0.82758 0.0005916 -0.1806 -0.0001291 0.64699 0.0004625 714.859488531284 719.863427079845 57.45 0.83123 57.45 57.156 57.987 0 375 62 8 0 0 0 1.891E-06 2 32405 126.71 114.7 1 1.0452 1.1888 0 113060000 55933000 57123000 32110 1457 12187 12522 50066;50067 50067 SLYASSPGGVYATR 14 0 1 Unmodified _SLYASSPGGVYATR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.8602 2 714.859523 1427.70449 72295.23 0.49587 0.00035448 0.10164 7.2656E-05 0.59751 0.00042713 714.859727303468 719.863609772718 56.359 0.5705 56.359 56.193 56.763 -3.8147E-06 258 41 10 0 0 0 1.3796E-10 2 32381 137.01 113.63 1 1.1095 1.2791 0 229090000 110840000 118250000 32111 1457 12187 12522 50068;50069 50069 SLYASSPGGVYATR 14 0 1 Unmodified _SLYASSPGGVYATR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.8597 2 714.859523 1427.70449 71461.34 0.73379 0.00052456 -0.39779 -0.00028437 0.336 0.00024019 714.859876886796 719.863440453689 66.96 0.96094 66.96 66.696 67.657 0 334 68 8 0 0 0 0.0016007 2 34933 67.385 67.385 1 2.5961 2.1783 0 25916000 7545100 18371000 32112 1457 12187 12522 50070;50071 50070 SLYASSPGGVYATR 14 0 1 Unmodified _SLYASSPGGVYATR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.8639 2 714.859523 1427.70449 71861.2 0.55959 0.00040003 -0.21152 -0.00015121 0.34807 0.00024882 714.859661441293 719.863530316168 67.552 0.95568 67.552 67.227 68.183 7.6294E-06 339 66 8 0 0 0 0.00066673 2 34426 60.49 60.49 1 2.891 2.4906 0 22201000 5734400 16466000 32113 1457 12187 12522 50072;50073 50073 SLYDEVAAQGEVVR 14 0 1 Unmodified _SLYDEVAAQGEVVR_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.3929 2 768.388645 1534.76274 69063.67 0.91399 0.0007023 0.0027804 2.1364E-06 0.91677 0.00070444 768.388513239892 773.392815491001 85.158 1.0155 85.158 84.775 85.79 0 275 83 7 0 0 0 3.0632E-15 2 51019 136.96 131.23 1 2.4955 2.6673 0 44897000 13023000 31875000 32114 1454 12188 12523 50074;50075 50074 SLYDEVAAQGEVVR 14 0 1 Unmodified _SLYDEVAAQGEVVR_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.3925 2 768.388645 1534.76274 NaN NaN NaN 0.093099 7.1536E-05 NaN NaN NaN NaN 84.369 1.1097 84.369 84.038 85.148 -7.6294E-06 0 0 0 6.5363E-23 1 51683 142.08 130.22 1 NaN NaN 0 20299000 0 20299000 32115 1454 12188 12523 50076 50076 SLYGLGGSK 9 1 0 Unmodified _SLYGLGGSK_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;A0A0S2Z427;CON__P04259;B4DKV4 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2398 2 441.239993 880.465432 NaN NaN NaN 0.013452 5.9357E-06 NaN NaN NaN NaN 45.546 0.8462 45.546 45.098 45.944 0 0 0 0 0.0084211 1 24876 68.224 26.721 1 NaN NaN 0 46233000 46233000 0 + 32116 859;1154 12189 12524 50077 50077 SLYNLGGSK 9 1 0 Unmodified _SLYNLGGSK_ 0 0 0 CON__P13647;P13647;F8VV57 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.752 2 469.750724 937.486896 NaN NaN NaN 0.36545 0.00017167 NaN NaN NaN NaN 45.357 0.76122 45.357 44.966 45.727 0 0 0 0 0.048239 1 24293 47.594 23.737 1 NaN NaN 0 32519000 32519000 0 + 32117 1162 12190 12525 50078 50078 SLYNLGGSK 9 1 0 Unmodified _SLYNLGGSK_ 0 0 0 CON__P13647;P13647;F8VV57 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.7506 2 469.750724 937.486896 NaN NaN NaN 0.46138 0.00021673 NaN NaN NaN NaN 44.529 0.62529 44.529 44.198 44.823 0 0 0 0 0.04166 1 24231 49.715 21.608 1 NaN NaN 0 35204000 35204000 0 + 32118 1162 12190 12525 50079 50079 SLYNLGGSK 9 1 0 Unmodified _SLYNLGGSK_ 0 0 0 CON__P13647;P13647;F8VV57 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 469.7509 2 469.750724 937.486896 NaN NaN NaN 0.82029 0.00038533 NaN NaN NaN NaN 52.483 0.76878 52.483 52.106 52.875 -3.8147E-06 0 0 0 0.015282 1 25311 62.582 29.224 1 NaN NaN 0 3127700 3127700 0 + 32119 1162 12190 12525 50080 50080 SLYQSAGVAPESFEYIEAHGTGTK 24 1 0 Unmodified _SLYQSAGVAPESFEYIEAHGTGTK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.7432 3 848.074726 2541.20235 66654.37 0.81749 0.00069329 -0.043717 -3.7075E-05 0.77377 0.00065622 848.408667408524 851.080311687579 95.568 0.69048 95.568 95.248 95.938 0 238 54 6 0 0 0 0.0025851 1 58031 23.864 23.864 1 1.4353 1.5529 0 35916000 15854000 20062000 32120 587 12191 12526 50081 50081 SLYQSAGVAPESFEYIEAHGTGTK 24 1 0 Unmodified _SLYQSAGVAPESFEYIEAHGTGTK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.4085 3 848.074726 2541.20235 65585.41 0.78158 0.00066284 -0.73587 -0.00062407 0.045713 3.8768E-05 848.408123801558 851.414201277665 94.685 0.64447 94.685 94.385 95.03 0 339 53 9 0 0 0 4.0708E-09 3 58812 50.945 50.945 1 1.4101 1.5491 0 41870000 16127000 25742000 32121 587 12191 12526 50082;50083;50084 50083 SLYQSAGVAPESFEYIEAHGTGTK 24 1 0 Unmodified _SLYQSAGVAPESFEYIEAHGTGTK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.4086 3 848.074726 2541.20235 64867.04 0.85091 0.00072164 -1.0075 -0.00085446 -0.15662 -0.00013282 848.741698538208 851.080327183623 108.77 0.51291 108.77 108.56 109.07 -7.6294E-06 144 24 9 0 0 0 2.928E-06 3 62504 45.735 45.735 1 0.68394 0.53162 0 12574000 7356800 5217400 32122 587 12191 12526 50085;50086;50087 50086 SLYQSAGVAPESFEYIEAHGTGTK 24 1 0 Unmodified _SLYQSAGVAPESFEYIEAHGTGTK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.4078 3 848.074726 2541.20235 64598.47 0.65179 0.00055277 -1.3289 -0.001127 -0.67708 -0.00057422 848.407544404699 851.080435782759 108.68 0.53516 108.68 108.47 109 0 177 27 10 0 0 0 7.5244E-05 3 61535 36.256 36.256 1 0.56695 0.45807 0 13509000 8521700 4987200 32123 587 12191 12526 50088;50089;50090 50089 SLYTDESSKPGK 12 2 0 Unmodified _SLYTDESSKPGK_ 0 0 1 Q9BXS6;A8K4B4;H0YMD2 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.3254 2 656.324982 1310.63541 73762.05 0.27338 0.00017943 -0.75556 -0.00049589 -0.48218 -0.00031647 656.324936834245 664.339432997548 21.614 0.40173 21.614 21.442 21.843 0 65 13 9 0 0 0 3.777E-08 1 6595 123.75 119.73 1 0.54771 0.47102 0 6615300 4091100 2524200 32124 2014 12192 12527 50091 50091 SLYTDESSKPGK 12 2 0 Unmodified _SLYTDESSKPGK_ 0 0 1 Q9BXS6;A8K4B4;H0YMD2 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.3252 2 656.324982 1310.63541 73151.48 0.18613 0.00012216 -0.67392 -0.00044231 -0.48778 -0.00032014 656.32504259903 664.339403230583 21.507 0.38911 21.507 21.359 21.748 1.9073E-06 85 15 9 0 0 0 0.0036908 2 6069 67.334 63.18 1 0.54084 0.46094 0 5177600 3169200 2008500 32125 2014 12192 12527 50092;50093 50092 SLYYYIQQDTK 11 1 0 Unmodified _SLYYYIQQDTK_ 0 0 0 V9HW65;A0A024R5Z7;P07355;B4DNH8;A6NMY6 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3508 2 711.351 1420.68745 NaN NaN NaN 0.29707 0.00021132 NaN NaN NaN NaN 77.156 0.40484 77.156 76.93 77.335 0 0 0 0 0.040808 1 46625 60.167 39.297 1 NaN NaN 0 7532600 7532600 0 32126 193 12193 12528 50094 50094 SMDEFTASTPADLGEAGR 18 0 1 Oxidation (M) _SM(ox)DEFTASTPADLGEAGR_ SM(1)DEFTASTPADLGEAGR SM(41.09)DEFTASTPADLGEAGR 0 1 0 A8K273;B2RTX8;Q7Z5K2 A8K273 A8K273 WAPAL Wings apart-like protein homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 940.9172 2 935.909812 1869.80507 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.45 1 74.45 73.95 74.95 0 0 0 0 0.012014 1 43702 41.092 35.12 1 32127 708 12194 12529 50095 50095 544 SMDEFTASTPADLGEAGR 18 0 1 Oxidation (M) _SM(ox)DEFTASTPADLGEAGR_ SM(1)DEFTASTPADLGEAGR SM(41.64)DEFTASTPADLGEAGR 0 1 0 A8K273;B2RTX8;Q7Z5K2 A8K273 A8K273 WAPAL Wings apart-like protein homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 940.9135 2 935.909812 1869.80507 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.639 1 73.639 73.139 74.139 0 0 0 0 0.010761 1 44225 41.644 33.54 1 32128 708 12194 12529 50096 50096 544 SMDLSEYIIR 10 0 1 Oxidation (M) _SM(ox)DLSEYIIR_ SM(1)DLSEYIIR SM(66.3)DLSEYIIR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8093 2 621.805371 1241.59619 77816.41 0.48394 0.00030092 1.3459 0.00083689 1.8298 0.0011378 621.805912588423 626.809576393198 87.735 0.72526 87.735 87.204 87.929 0 161 71 4 0 0 0 0.0014772 1 52848 66.299 66.299 1 1.1527 1.1792 0 34334000 15325000 19009000 32129 2023 12195 12530 50097 50097 1863 SMDLSEYIIR 10 0 1 Oxidation (M) _SM(ox)DLSEYIIR_ SM(1)DLSEYIIR SM(88.37)DLSEYIIR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.8057 2 621.805371 1241.59619 77886.32 0.37394 0.00023252 0.61188 0.00038047 0.98582 0.00061299 621.805683064398 626.80940461919 87.024 1.1857 87.024 86.608 87.794 0 306 98 5 0 0 0 0.00018131 2 53482 88.37 83.168 1 1.1126 1.2179 0 32891000 14529000 18362000 32130 2023 12195 12530 50098;50099 50099 1863 SMDLSEYIIR 10 0 1 Oxidation (M) _SM(ox)DLSEYIIR_ SM(1)DLSEYIIR SM(55.06)DLSEYIIR 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.3126 2 621.805371 1241.59619 79202.49 0.41999 0.00026115 0.52539 0.00032669 0.94538 0.00058784 622.307100554259 626.809343599382 100.33 0.39651 100.33 100.1 100.49 0 111 30 5 0 0 0 0.0044478 1 55818 55.064 55.064 1 1.1277 0.974 0 4371700 2561600 1810100 32131 2023 12195 12530 50100 50100 1863 SMDLSEYIIR 10 0 1 Unmodified _SMDLSEYIIR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8128 2 613.807913 1225.60127 78020.24 0.2504 0.0001537 0.3269 0.00020065 0.5773 0.00035435 613.808057251811 618.812333589767 116.55 0.58183 116.55 116.29 116.87 7.6294E-06 96 22 7 0 0 0 0.0088105 1 68537 55.567 49.825 1 1.5404 1.2919 0 4132100 1573100 2559000 32132 2023 12195 12531 50101 50101 SMDLSEYIIR 10 0 1 Unmodified _SMDLSEYIIR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.8118 2 613.807913 1225.60127 78119.55 0.72867 0.00044727 0.07688 4.719E-05 0.80555 0.00049446 613.807886435304 618.812051243259 116.38 0.48322 116.38 116.16 116.64 0 94 21 7 0 0 0 0.0030193 1 67451 66.435 57.018 1 1.6784 1.4565 0 4310400 1702500 2607800 32133 2023 12195 12531 50102 50102 SMEAEMIQLQEELAAAER 18 0 1 2 Oxidation (M) _SM(ox)EAEM(ox)IQLQEELAAAER_ SM(1)EAEM(1)IQLQEELAAAER SM(81.49)EAEM(81.49)IQLQEELAAAER 0 2 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1041.4838 2 1040.97991 2079.94527 60314.74 0.45818 0.00047695 -0.24376 -0.00025375 0.21441 0.0002232 1041.48153408216 1045.98402015404 94.55 0.62055 94.55 94.249 94.87 -7.6294E-06 270 57 7 0 0 0 9.5485E-06 1 57347 81.494 81.494 1 3.4494 3.6622 0 42285000 11375000 30910000 32134 81 12196 12532 50103 50103 69;70 SMEAEMIQLQEELAAAER 18 0 1 2 Oxidation (M) _SM(ox)EAEM(ox)IQLQEELAAAER_ SM(1)EAEM(1)IQLQEELAAAER SM(94.09)EAEM(94.09)IQLQEELAAAER 0 2 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1045.9819 2 1040.97991 2079.94527 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.239 1 94.239 93.739 94.739 0 0 0 0 1.5163E-07 1 57231 94.09 80.126 1 32135 81 12196 12532 50104 50104 69;70 SMEAEMIQLQEELAAAER 18 0 1 2 Oxidation (M) _SM(ox)EAEM(ox)IQLQEELAAAER_ SM(1)EAEM(1)IQLQEELAAAER SM(151.54)EAEM(151.54)IQLQEELAAAER 0 2 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1045.9858 2 1040.97991 2079.94527 60045.1 0.48257 0.00050234 -0.3156 -0.00032853 0.16697 0.00017381 1041.48111327217 1045.98396409966 93.768 0.67844 93.768 93.494 94.172 0 292 59 7 0 0 0 3.9842E-39 3 58070 151.54 151.54 1 3.2696 3.7892 0 66195000 13191000 53004000 32136 81 12196 12532 50105;50106;50107 50105 69;70 SMEAEMIQLQEELAAAER 18 0 1 2 Oxidation (M) _SM(ox)EAEM(ox)IQLQEELAAAER_ SM(1)EAEM(1)IQLQEELAAAER SM(86.94)EAEM(86.94)IQLQEELAAAER 0 2 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1040.9799 2 1040.97991 2079.94527 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.592 1 93.592 93.092 94.092 7.6294E-06 0 0 0 1.0772E-06 1 58103 86.944 73.517 1 32137 81 12196 12532 50108 50108 69;70 SMEAEMIQLQEELAAAER 18 0 1 Oxidation (M) _SM(ox)EAEMIQLQEELAAAER_ SM(0.967)EAEM(0.033)IQLQEELAAAER SM(14.63)EAEM(-14.63)IQLQEELAAAER 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1038.4838 2 1032.98245 2063.95036 57790.06 0.52024 0.0005374 0.59018 0.00060965 1.1104 0.001147 1032.98371109137 1038.48821368671 124.5 0.3737 124.5 124.3 124.68 -7.6294E-06 53 16 5 0 0 0 0.00023394 1 73702 44.571 39.394 2 1.9493 1.6836 0 1750000 527810 1222200 32138 81 12196 12533 50109 50109 69;70 SMEDFVTWVDSSK 13 1 0 Oxidation (M) _SM(ox)EDFVTWVDSSK_ SM(1)EDFVTWVDSSK SM(83.18)EDFVTWVDSSK 0 1 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.349 2 773.840139 1545.66572 NaN NaN NaN -0.091863 -7.1087E-05 NaN NaN NaN NaN 94.168 0.18317 94.168 94.048 94.232 7.6294E-06 0 0 0 0.00015915 1 58542 83.182 66.55 1 NaN NaN 0 3553200 0 3553200 32139 2073 12197 12534 50110 50110 1909 SMEEQLLVVER 11 0 1 Oxidation (M) _SM(ox)EEQLLVVER_ SM(1)EEQLLVVER SM(157.38)EEQLLVVER 0 1 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.8467 2 674.842484 1347.67042 72227.77 0.67321 0.00045431 0.31603 0.00021327 0.98924 0.00066758 674.843039279766 679.846662377766 71.572 0.87389 71.572 71.232 72.106 0 345 73 6 0 0 0 3.2266E-17 1 41655 157.38 146.55 1 1.2047 1.2883 0 45097000 22007000 23089000 32140 790 12198 12535 50111 50111 634 SMEEQLLVVER 11 0 1 Oxidation (M) _SM(ox)EEQLLVVER_ SM(1)EEQLLVVER SM(172.8)EEQLLVVER 0 1 0 A8KA74;P78316;E9PFK5;Q96GC8 A8KA74 A8KA74 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.8465 2 674.842484 1347.67042 73303.35 0.56183 0.00037915 -0.2154 -0.00014536 0.34643 0.00023379 674.842727940739 679.846553191504 70.281 1.0327 70.281 69.886 70.918 0 354 81 7 0 0 0 1.2175E-23 2 41859 172.8 159.03 1 1.1638 1.2808 0 40931000 19154000 21777000 32141 790 12198 12535 50112;50113 50112 634 SMENYYQESGR 11 0 1 Oxidation (M) _SM(ox)ENYYQESGR_ SM(1)ENYYQESGR SM(104.22)ENYYQESGR 0 1 0 A0A024RAV2;P46063 A0A024RAV2 A0A024RAV2 RECQL ATP-dependent DNA helicase Q1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.2861 2 690.280248 1378.54594 NaN NaN NaN 0.095599 6.599E-05 NaN NaN NaN NaN 21.754 0.28141 21.754 21.612 21.893 0 0 0 0 3.5367E-06 1 7935 104.22 101.95 1 NaN NaN 0 4993000 0 4993000 32142 314 12199 12536 50114 50114 233 SMFTQALNLDSTSVR 15 0 1 Oxidation (M) _SM(ox)FTQALNLDSTSVR_ SM(1)FTQALNLDSTSVR SM(64.65)FTQALNLDSTSVR 0 1 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.4152 2 843.411794 1684.80903 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.345 1 88.345 87.845 88.845 0 0 0 0 0.00066962 1 53267 64.65 37.977 1 32143 1392 12200 12537 50115 50115 1070 SMFTQALNLDSTSVR 15 0 1 Oxidation (M) _SM(ox)FTQALNLDSTSVR_ SM(1)FTQALNLDSTSVR SM(42.1)FTQALNLDSTSVR 0 1 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.4177 2 843.411794 1684.80903 NaN NaN NaN 1.564 0.0013191 NaN NaN NaN NaN 87.536 0.15343 87.536 87.479 87.633 0 0 0 0 0.0068672 1 53996 42.095 25.464 1 NaN NaN 0 3963900 0 3963900 32144 1392 12200 12537 50116 50116 1070 SMFTQALNLDSTSVR 15 0 1 Oxidation (M) _SM(ox)FTQALNLDSTSVR_ SM(1)FTQALNLDSTSVR SM(72.96)FTQALNLDSTSVR 0 1 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.9224 2 843.411794 1684.80903 NaN NaN NaN 2.6578 0.0022416 NaN NaN NaN NaN 87.799 0.30482 87.799 87.647 87.952 0 0 0 0 0.00013426 2 54162 72.958 48.103 1 NaN NaN 0 7333500 0 7333500 32145 1392 12200 12537 50117;50118 50118 1070 SMFTQALNLDSTSVR 15 0 1 Oxidation (M) _SM(ox)FTQALNLDSTSVR_ SM(1)FTQALNLDSTSVR SM(54.02)FTQALNLDSTSVR 0 1 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.4179 2 843.411794 1684.80903 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.637 1 87.637 87.137 88.137 0 0 0 0 0.0019825 1 54021 54.023 41.81 1 32146 1392 12200 12537 50119 50119 1070 SMGGAAIAPPTSLVEK 16 1 0 Oxidation (M) _SM(ox)GGAAIAPPTSLVEK_ SM(1)GGAAIAPPTSLVEK SM(47.29)GGAAIAPPTSLVEK 0 1 0 Q5W009;Q96I25;Q5W011;Q5W010;H0Y6J6;Q5W012 Q5W009 Q5W009 RBM17 Splicing factor 45 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.9036 2 772.903073 1543.79159 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.127 1 79.127 78.627 79.627 0 0 0 0 0.004013 1 46902 47.288 40.4 1 32147 1836 12201 12538 50120 50120 1691 SMGGAAIAPPTSLVEK 16 1 0 Oxidation (M) _SM(ox)GGAAIAPPTSLVEK_ SM(1)GGAAIAPPTSLVEK SM(45.92)GGAAIAPPTSLVEK 0 1 0 Q5W009;Q96I25;Q5W011;Q5W010;H0Y6J6;Q5W012 Q5W009 Q5W009 RBM17 Splicing factor 45 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.9027 2 772.903073 1543.79159 69884.81 0.46966 0.000363 -0.21303 -0.00016465 0.25664 0.00019835 772.902555734767 776.909703010969 78.053 0.30098 78.053 77.905 78.206 7.6294E-06 75 26 5 0 0 0 0.00061448 1 47342 45.915 45.915 1 2.655 2.7226 0 11790000 3093300 8697200 32148 1836 12201 12538 50121 50121 1691 SMGTLENTFEGHK 13 1 0 Oxidation (M) _SM(ox)GTLENTFEGHK_ SM(1)GTLENTFEGHK SM(57.53)GTLENTFEGHK 0 1 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.8303 2 733.832648 1465.65074 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.704 1 34.704 34.204 35.204 0 0 0 0 0.0024142 1 17405 57.532 43.762 1 32149 1849 12202 12539 50122 50122 1698 SMLMEQDPDVAVTVR 15 0 1 2 Oxidation (M) _SM(ox)LM(ox)EQDPDVAVTVR_ SM(1)LM(1)EQDPDVAVTVR SM(95.02)LM(95.02)EQDPDVAVTVR 0 2 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 866.9094 2 861.905487 1721.79642 NaN NaN NaN -0.59672 -0.00051431 NaN NaN NaN NaN 66.856 0.63016 66.856 66.44 67.07 0 0 0 0 1.6871E-07 4 38440 95.018 83.152 1 NaN NaN 0 6393800 0 6393800 32150 780 12203 12540 50123;50124;50125;50126 50123 611;612 SMLMEQDPDVAVTVR 15 0 1 2 Oxidation (M) _SM(ox)LM(ox)EQDPDVAVTVR_ SM(1)LM(1)EQDPDVAVTVR SM(82.54)LM(82.54)EQDPDVAVTVR 0 2 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.9055 2 861.905487 1721.79642 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.86 1 66.86 66.36 67.36 0 0 0 0 0.0002229 1 38603 82.543 67.004 1 32151 780 12203 12540 50127 50127 611;612 SMLMEQDPDVAVTVR 15 0 1 2 Oxidation (M) _SM(ox)LM(ox)EQDPDVAVTVR_ SM(1)LM(1)EQDPDVAVTVR SM(82.54)LM(82.54)EQDPDVAVTVR 0 2 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.9077 2 861.905487 1721.79642 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.924 1 66.924 66.424 67.424 0 0 0 0 0.0002229 1 38643 82.543 68.88 1 32152 780 12203 12540 50128 50128 611;612 SMLMEQDPDVAVTVR 15 0 1 2 Oxidation (M) _SM(ox)LM(ox)EQDPDVAVTVR_ SM(1)LM(1)EQDPDVAVTVR SM(92.93)LM(92.93)EQDPDVAVTVR 0 2 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.9058 2 861.905487 1721.79642 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.812 1 65.812 65.312 66.312 0 0 0 0 4.0322E-05 1 38853 92.925 77.386 1 32153 780 12203 12540 50129 50129 611;612 SMMNLQTK 8 1 0 Unmodified _SMMNLQTK_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.7407 2 476.733163 951.451773 88572.23 0.22031 0.00010503 -0.81223 -0.00038721 -0.59191 -0.00028218 476.733061944378 480.740277838756 44.338 0.51371 44.338 44.058 44.571 0 130 33 6 0 0 0 0.029143 1 21010 52.786 24.274 1 1.8188 1.4666 0 2798000 1068200 1729700 32154 1470 12204 12541 50130 50130 SMMNLQTK 8 1 0 Unmodified _SMMNLQTK_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.7401 2 476.733163 951.451773 89582.95 0.4149 0.0001978 -0.91753 -0.00043742 -0.50263 -0.00023962 476.733044154249 480.74015186873 44.334 0.6178 44.334 44.057 44.675 0 141 40 7 0 0 0 0.012954 1 20441 66.429 37.091 1 2.2782 1.8501 0 2882200 1027800 1854400 32155 1470 12204 12541 50131 50131 SMMQDREDQSILCTGESGAGK 21 1 1 2 Oxidation (M) _SM(ox)M(ox)QDREDQSILCTGESGAGK_ SM(1)M(1)QDREDQSILCTGESGAGK SM(92.93)M(92.93)QDREDQSILCTGESGAGK 0 2 1 A0A024R1N1;P35579;Q86XU5;B4E3S1;Q5BKV1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.0091 3 777.999846 2330.97771 67984.98 0.62371 0.00048525 -0.32111 -0.00024982 0.30261 0.00023543 778.33460972898 784.34191510621 36.875 0.38265 36.875 36.696 37.079 0 140 28 8 0 0 0 1.7557E-11 1 18997 92.932 90.17 1 2.3623 2.6878 0 18916000 4541700 14374000 32156 81 12205 12542 50132 50132 71;72 SMQDVVEDFK 10 1 0 Oxidation (M) _SM(ox)QDVVEDFK_ SM(1)QDVVEDFK SM(87.3)QDVVEDFK 0 1 0 CON__Q3KNV1;P08729 CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.2813 2 607.273903 1212.53325 NaN NaN NaN 0.0052638 3.1965E-06 NaN NaN NaN NaN 53.038 0.98663 53.038 52.545 53.531 0 0 0 0 0.00037168 1 29429 87.298 78.084 1 NaN NaN 0 39641000 0 39641000 + 32157 1171 12206 12543 50133 50133 890 SMQDVVEDFK 10 1 0 Oxidation (M) _SM(ox)QDVVEDFK_ SM(1)QDVVEDFK SM(102.06)QDVVEDFK 0 1 0 CON__Q3KNV1;P08729 CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.2808 2 607.273903 1212.53325 78609.98 0.31532 0.00019148 -0.0095408 -5.7939E-06 0.30578 0.00018569 607.27428754987 611.280927584824 51.82 0.95319 51.82 51.338 52.291 -3.8147E-06 284 73 6 0 0 0 6.889E-06 1 29336 102.06 89.836 1 1.8803 2.1007 0 89078000 30548000 58530000 + 32158 1171 12206 12543 50134 50134 890 SMQDVVEDFK 10 1 0 Oxidation (M) _SM(ox)QDVVEDFK_ SM(1)QDVVEDFK SM(52.49)QDVVEDFK 0 1 0 CON__Q3KNV1;P08729 CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.2742 2 607.273903 1212.53325 79997.81 0.40186 0.00024404 0.054283 3.2964E-05 0.45614 0.000277 607.273756023785 611.281169168483 61.098 0.93854 61.098 60.793 61.732 0 219 75 6 0 0 0 0.0053649 2 31205 52.49 46.163 1 1.046 0.82528 0 4082200 2139800 1942400 + 32159 1171 12206 12543 50135;50136 50135 890 SMQDVVEDFK 10 1 0 Unmodified _SMQDVVEDFK_ 0 0 0 CON__Q3KNV1;P08729 CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.2841 2 599.276446 1196.53834 NaN NaN NaN -0.20239 -0.00012129 NaN NaN NaN NaN 93.039 0.71643 93.039 92.696 93.412 7.6294E-06 0 0 0 0.052955 1 51970 46.001 33.19 1 NaN NaN 0 1818700 0 1818700 + 32160 1171 12206 12544 50137 50137 SMQDVVEDFK 10 1 0 Unmodified _SMQDVVEDFK_ 0 0 0 CON__Q3KNV1;P08729 CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.2847 2 599.276446 1196.53834 80217.62 0.42775 0.00025634 0.27671 0.00016583 0.70446 0.00042217 599.276850071515 603.283563023393 93.064 0.74096 93.064 92.664 93.405 7.6294E-06 144 48 5 0 0 0 0.012313 1 51071 50.805 32.896 1 0.97564 0.79262 0 2936500 1381600 1554900 + 32161 1171 12206 12544 50138 50138 SMQVVPLDK 9 1 0 Unmodified _SMQVVPLDK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 508.7758 2 508.775885 1015.53722 84541.57 -0.10427 -5.305E-05 0.46956 0.0002389 0.36529 0.00018585 508.776060631695 512.783060634824 71.276 0.4255 71.276 71.069 71.495 7.6294E-06 85 24 5 0 0 0 0.042602 2 36679 40.994 40.994 1 1.4533 1.149 0 2320500 1111300 1209200 32162 125 12207 12545 50139;50140 50140 SMSDVSAEDVQNLR 14 0 1 Oxidation (M) _SM(ox)SDVSAEDVQNLR_ SM(1)SDVSAEDVQNLR SM(128.01)SDVSAEDVQNLR 0 1 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;E9PLU6;E9PK58;E9PJ10 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.8613 2 783.856851 1565.69915 NaN NaN NaN 0.14124 0.00011071 NaN NaN NaN NaN 51.184 0.45974 51.184 50.933 51.393 -3.8147E-06 0 0 0 6.0335E-16 1 28186 128.01 121.13 1 NaN NaN 0 9591000 0 9591000 32163 640 12208 12546 50141 50141 497 SMSDVSAEDVQNLR 14 0 1 Oxidation (M) _SM(ox)SDVSAEDVQNLR_ SM(1)SDVSAEDVQNLR SM(126.19)SDVSAEDVQNLR 0 1 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;E9PLU6;E9PK58;E9PJ10 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.8613 2 783.856851 1565.69915 NaN NaN NaN 0.59102 0.00046328 NaN NaN NaN NaN 49.928 0.5854 49.928 49.827 50.412 0 0 0 0 9.7907E-16 1 28122 126.19 122.04 1 NaN NaN 0 15041000 0 15041000 32164 640 12208 12546 50142 50142 497 SMSDVSAEDVQNLR 14 0 1 Oxidation (M) _SM(ox)SDVSAEDVQNLR_ SM(1)SDVSAEDVQNLR SM(43.68)SDVSAEDVQNLR 0 1 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;E9PLU6;E9PK58;E9PJ10 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 788.8608 2 783.856851 1565.69915 NaN NaN NaN -0.21338 -0.00016726 NaN NaN NaN NaN 59.638 0.66644 59.638 59.31 59.976 0 0 0 0 0.0069812 1 30365 43.68 37.708 1 NaN NaN 0 1166700 0 1166700 32165 640 12208 12546 50143 50143 497 SMSDVSAEDVQNLR 14 0 1 Oxidation (M) _SM(ox)SDVSAEDVQNLR_ SM(1)SDVSAEDVQNLR SM(56.09)SDVSAEDVQNLR 0 1 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;E9PLU6;E9PK58;E9PJ10 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.8608 2 783.856851 1565.69915 NaN NaN NaN -0.79914 -0.00062641 NaN NaN NaN NaN 60.427 0.68085 60.427 60.212 60.893 -3.8147E-06 0 0 0 0.0016112 1 30260 56.087 46.654 1 NaN NaN 0 1377400 0 1377400 32166 640 12208 12546 50144 50144 497 SMVDELFAEIVR 12 0 1 Oxidation (M) _SM(ox)VDELFAEIVR_ SM(1)VDELFAEIVR SM(72.01)VDELFAEIVR 0 1 0 Q9Y3L5;A0A087X2C3 Q9Y3L5 Q9Y3L5 RAP2C Ras-related protein Rap-2c ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.8624 2 712.858135 1423.70172 NaN NaN NaN 0.9258 0.00065996 NaN NaN NaN NaN 120.32 0.24431 120.32 120.21 120.45 -7.6294E-06 0 0 0 0.0006131 1 79535 72.006 52.735 1 NaN NaN 0 1412500 0 1412500 32167 2138 12209 12547 50145 50145 1978 SMVEEGTGLR 10 0 1 Oxidation (M) _SM(ox)VEEGTGLR_ SM(1)VEEGTGLR SM(51.07)VEEGTGLR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.7614 2 547.760963 1093.50737 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.644 1 24.644 24.144 25.144 0 0 0 0 0.012982 1 10362 51.066 39.845 1 32168 1754 12210 12548 50146 50146 1618 SMVPVQVQLDVPVVK 15 1 0 Oxidation (M) _SM(ox)VPVQVQLDVPVVK_ SM(1)VPVQVQLDVPVVK SM(93.77)VPVQVQLDVPVVK 0 1 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.4734 2 827.465841 1652.91713 67438.98 0.92198 0.00076291 -0.3869 -0.00032015 0.53508 0.00044276 827.465597020972 831.47250476922 108.93 0.53619 108.93 108.67 109.21 7.6294E-06 205 32 8 0 0 0 4.3486E-06 2 68079 93.766 93.766 1 0.83549 0.92406 0 57594000 29310000 28284000 32169 550 12211 12549 50147;50148 50148 405 SMVPVQVQLDVPVVK 15 1 0 Oxidation (M) _SM(ox)VPVQVQLDVPVVK_ SM(1)VPVQVQLDVPVVK SM(141.13)VPVQVQLDVPVVK 0 1 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.4733 2 827.465841 1652.91713 67203.2 0.79631 0.00065892 -0.41337 -0.00034205 0.38294 0.00031687 827.465614118283 831.472578299828 108.43 0.53885 108.43 108.15 108.69 0 229 35 8 0 0 0 3.6271E-22 2 69352 141.13 141.13 1 0.8967 0.9942 0 47556000 27539000 20018000 32170 550 12211 12549 50149;50150 50150 405 SMVPVQVQLDVPVVK 15 1 0 Oxidation (M) _SM(ox)VPVQVQLDVPVVK_ SM(1)VPVQVQLDVPVVK SM(64.12)VPVQVQLDVPVVK 0 1 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.4664 2 827.465841 1652.91713 66977.08 0.71452 0.00059124 0.0015762 1.3042E-06 0.7161 0.00059255 827.466039600739 831.472832844218 120.17 0.72298 120.17 119.87 120.6 0 177 30 9 0 0 0 0.00010671 2 71252 64.121 64.121 1 0.55404 0.45418 0 36419000 22845000 13574000 32171 550 12211 12549 50151;50152 50151 405 SMVPVQVQLDVPVVK 15 1 0 Oxidation (M) _SM(ox)VPVQVQLDVPVVK_ SM(1)VPVQVQLDVPVVK SM(57.8)VPVQVQLDVPVVK 0 1 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.4666 2 827.465841 1652.91713 NaN NaN NaN -0.085424 -7.0685E-05 NaN NaN NaN NaN 119.88 0.70079 119.88 119.65 120.35 7.6294E-06 0 0 0 0.0013609 1 70328 57.802 47.57 1 NaN NaN 0 13309000 13309000 0 32172 550 12211 12549 50153 50153 405 SMVPVQVQLDVPVVK 15 1 0 Unmodified _SMVPVQVQLDVPVVK_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 823.9783 2 819.468383 1636.92221 67883.79 1.1491 0.00094169 0.087238 7.1488E-05 1.2364 0.0010132 819.970087829159 823.475688903013 128.68 0.44215 128.68 128.47 128.91 0 107 19 8 0 0 0 0.00022 2 77677 63.727 63.727 1 1.1228 0.8812 0 16914000 8149100 8765000 32173 550 12211 12550 50154;50155 50154 SMVPVQVQLDVPVVK 15 1 0 Unmodified _SMVPVQVQLDVPVVK_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 819.4698 2 819.468383 1636.92221 68110.37 0.98043 0.00080343 -0.21846 -0.00017902 0.76196 0.0006244 819.468306809758 823.475354554651 128.48 0.4379 128.48 128.28 128.72 0 92 18 8 0 0 0 2.8101E-06 2 76684 98.407 98.407 1 1.2051 0.98917 0 5200500 2548500 2652000 32174 550 12211 12550 50156;50157 50157 SMVTEEFNGSDWEK 14 1 0 Oxidation (M) _SM(ox)VTEEFNGSDWEK_ SM(1)VTEEFNGSDWEK SM(105.17)VTEEFNGSDWEK 0 1 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.8583 2 837.851235 1673.68792 66670.47 0.58835 0.00049295 -0.1959 -0.00016414 0.39245 0.00032881 837.851122244863 841.858329779395 69.003 0.99973 69.003 68.317 69.317 0 332 88 6 0 0 0 1.2332E-06 2 39984 105.17 102.66 1 1.2523 1.2339 0 24425000 12032000 12393000 32175 1882 12212 12551 50158;50159 50159 1726 SMVTEEFNGSDWEK 14 1 0 Oxidation (M) _SM(ox)VTEEFNGSDWEK_ SM(1)VTEEFNGSDWEK SM(130.01)VTEEFNGSDWEK 0 1 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 841.8593 2 837.851235 1673.68792 66776.2 0.59923 0.00050207 -0.31879 -0.00026709 0.28045 0.00023497 837.850766562145 841.858405329734 67.673 0.97856 67.673 67.251 68.229 0 398 81 6 0 0 0 1.1945E-14 2 40342 130.01 129.35 1 1.2521 1.3294 0 20506000 8183900 12323000 32176 1882 12212 12551 50160;50161 50161 1726 SMVTEEFNGSDWEK 14 1 0 Oxidation (M) _SM(ox)VTEEFNGSDWEK_ SM(1)VTEEFNGSDWEK SM(41.68)VTEEFNGSDWEK 0 1 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 841.8579 2 837.851235 1673.68792 67116.95 0.48863 0.0004094 -0.030191 -2.5295E-05 0.45844 0.00038411 837.85135207054 841.858347210404 79 0.90052 79 78.71 79.611 7.6294E-06 225 52 8 0 0 0 0.0032323 1 42389 41.684 41.684 1 1.264 1.0146 0 7671300 3618800 4052500 32177 1882 12212 12551 50162 50162 1726 SMVTEEFNGSDWEK 14 1 0 Oxidation (M) _SM(ox)VTEEFNGSDWEK_ SM(1)VTEEFNGSDWEK SM(69.86)VTEEFNGSDWEK 0 1 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 837.8517 2 837.851235 1673.68792 66522.79 0.51697 0.00043315 0.090177 7.5555E-05 0.60715 0.0005087 837.851351167924 841.858589536809 79.307 0.54271 79.307 79.053 79.596 0 172 32 8 0 0 0 9.5108E-05 2 41884 69.864 69.864 1 1.2723 1.0378 0 5939700 3091300 2848300 32178 1882 12212 12551 50163;50164 50164 1726 SMVTEEFNGSDWEK 14 1 0 Unmodified _SMVTEEFNGSDWEK_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.8621 2 829.853777 1657.693 68080.23 0.69888 0.00057997 0.16264 0.00013497 0.86152 0.00071494 829.854249150749 833.860956102951 94.026 0.56179 94.026 93.781 94.343 -7.6294E-06 155 36 6 0 0 0 0.0012966 1 52616 54.7 54.457 1 2.3761 1.8452 0 3575700 948410 2627300 32179 1882 12212 12552 50165 50165 SMVTEEFNGSDWEK 14 1 0 Unmodified _SMVTEEFNGSDWEK_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 833.8618 2 829.853777 1657.693 67529.74 0.8341 0.00069218 0.23935 0.00019863 1.0735 0.00089081 830.355525751687 833.861037164707 94.081 0.56042 94.081 93.796 94.356 0 173 36 6 0 0 0 6.6215E-05 1 51784 90.614 90.614 1 2.1002 1.649 0 3303300 891740 2411500 32180 1882 12212 12552 50166 50166 SMYEEEINETR 11 0 1 Oxidation (M) _SM(ox)YEEEINETR_ SM(1)YEEEINETR SM(100.48)YEEEINETR 0 1 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 P20700 P20700 LMNB1 Lamin-B1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.8025 2 708.801014 1415.58747 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.648 1 34.648 34.148 35.148 0 0 0 0 1.118E-06 1 17372 100.48 85.326 1 32181 1502 12213 12553 50167 50167 1264 SMYEEEINETR 11 0 1 Oxidation (M) _SM(ox)YEEEINETR_ SM(1)YEEEINETR SM(83.87)YEEEINETR 0 1 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.8057 2 708.801014 1415.58747 72149.69 0.63735 0.00045175 1.0301 0.00073014 1.6675 0.0011819 709.302412117423 713.806682336605 33.924 0.52168 33.924 33.763 34.284 0 76 40 5 0 0 0 0.00017901 1 17055 83.869 79.57 1 1.2804 1.2713 0 16092000 3817400 12275000 32182 1502 12213 12553 50168 50168 1264 SMYEEEINETR 11 0 1 Oxidation (M) _SM(ox)YEEEINETR_ SM(1)YEEEINETR SM(103.7)YEEEINETR 0 1 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 P20700 P20700 LMNB1 Lamin-B1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.8022 2 708.801014 1415.58747 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.871 1 33.871 33.371 34.371 0 0 0 0 6.3391E-07 1 17062 103.7 84.429 1 32183 1502 12213 12553 50169 50169 1264 SNAVQEADSELK 12 1 0 Unmodified _SNAVQEADSELK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.8209 2 645.812239 1289.60992 NaN NaN NaN -0.34255 -0.00022122 NaN NaN NaN NaN 41.591 0.38112 41.591 41.401 41.782 -3.8147E-06 0 0 0 0.0086958 1 22382 56.225 40.563 1 NaN NaN 0 4314300 0 4314300 32184 1835 12214 12554 50170 50170 SNAVQEADSELK 12 1 0 Unmodified _SNAVQEADSELK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.3192 2 645.812239 1289.60992 76430.68 0.58251 0.00037619 0.74318 0.00047995 1.3257 0.00085614 645.812181516895 649.819816501813 50.003 0.54194 50.003 49.763 50.305 0 177 47 5 0 0 0 0.0036902 1 24480 55.401 46.142 1 3.6053 2.8424 0 5534700 952310 4582400 32185 1835 12214 12554 50171 50171 SNAVQEADSELK 12 1 0 Unmodified _SNAVQEADSELK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.8124 2 645.812239 1289.60992 NaN NaN NaN 0.15348 9.9118E-05 NaN NaN NaN NaN 50.455 0.4464 50.455 50.268 50.715 0 0 0 0 0.030694 2 24209 47.302 36.138 1 NaN NaN 0 727620 727620 0 32186 1835 12214 12554 50172;50173 50173 SNCIPQATALSK 12 1 0 Unmodified _SNCIPQATALSK_ 0 0 0 Q13129 Q13129 Q13129 RLF Zinc finger protein Rlf ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.3306 2 645.329544 1288.64454 NaN NaN NaN 1.8778 0.0012118 NaN NaN NaN NaN 47.819 0.22331 47.819 47.74 47.963 0 0 0 0 0.038017 1 26650 44.612 25.867 1 NaN NaN 0 5170000 5170000 0 32187 1705 12215 12555 50174 50174 SNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGR 32 0 1 Unmodified _SNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1114.8258 3 1114.49211 3340.45449 57941.08 0.41601 0.00046365 -0.28916 -0.00032226 0.12686 0.00014138 1114.82633979008 1118.16216475954 126.2 0.41593 126.2 125.98 126.4 0 81 15 8 0 0 0 0.045996 1 75867 8.9128 8.37 1 0.68804 0.5759 0 3929600 2329600 1599900 32188 406 12216 12556 50175 50175 SNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGR 32 0 1 Unmodified _SNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1115.1615 3 1114.49211 3340.45449 59040.13 0.17957 0.00020013 -0.094008 -0.00010477 0.085561 9.5357E-05 1115.16052065668 1118.49664178457 126.11 0.44548 126.11 125.92 126.37 0 110 19 9 0 0 0 0.060132 1 74932 6.6318 5.9036 1 0.88722 0.75461 0 4599400 2477500 2122000 32189 406 12216 12556 50176 50176 SNEDQSMGNWQIK 13 1 0 Oxidation (M) _SNEDQSM(ox)GNWQIK_ SNEDQSM(1)GNWQIK SNEDQSM(74.75)GNWQIK 0 1 0 P02545;W8QEH3;Q5I6Y5;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.8384 2 776.838462 1551.66237 68863.85 0.93444 0.00072591 -0.28857 -0.00022417 0.64587 0.00050174 776.838322769232 780.845375184419 41.215 0.57098 41.215 40.89 41.461 0 266 46 8 0 0 0 5.4515E-05 1 21542 74.751 69.41 1 1.1828 1.3168 0 61046000 27570000 33476000 32190 1440 12217 12557 50177 50177 1139 SNEDQSMGNWQIK 13 1 0 Oxidation (M) _SNEDQSM(ox)GNWQIK_ SNEDQSM(1)GNWQIK SNEDQSM(136.02)GNWQIK 0 1 0 P02545;W8QEH3;Q5I6Y5;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.8381 2 776.838462 1551.66237 69499.14 0.88401 0.00068673 -0.24274 -0.00018857 0.64127 0.00049816 776.838345437702 780.845211219064 39.982 0.6832 39.982 39.749 40.432 0 317 59 7 0 0 0 2.1788E-14 1 21192 136.02 129.42 1 1.2156 1.3635 0 78028000 32951000 45077000 32191 1440 12217 12557 50178 50178 1139 SNEDQSMGNWQIK 13 1 0 Oxidation (M) _SNEDQSM(ox)GNWQIK_ SNEDQSM(1)GNWQIK SNEDQSM(55.72)GNWQIK 0 1 0 P02545;W8QEH3;Q5I6Y5;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.8385 2 776.838462 1551.66237 68995.38 0.50098 0.00038918 -0.30268 -0.00023513 0.1983 0.00015405 776.838414615411 780.845403302276 47.23 0.90136 47.23 46.817 47.718 0 376 69 7 0 0 0 0.00094745 2 22813 55.721 51.704 1 0.81213 0.64227 0 5097000 2756500 2340600 32192 1440 12217 12557 50179;50180 50179 1139 SNEDQSMGNWQIK 13 1 0 Unmodified _SNEDQSMGNWQIK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.8486 2 768.841004 1535.66746 71506.83 0.63833 0.00049077 -0.23475 -0.00018048 0.40358 0.00031029 768.841124853575 772.848038252053 72.813 0.60799 72.813 72.542 73.15 0 145 40 5 0 0 0 0.0022939 1 38415 54.343 52.587 1 1.5615 1.2634 0 2756100 999890 1756200 32193 1440 12217 12558 50181 50181 SNEDQSMGNWQIK 13 1 0 Unmodified _SNEDQSMGNWQIK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 772.8481 2 768.841004 1535.66746 69964.92 0.72346 0.00055623 -0.83846 -0.00064464 -0.11499 -8.8411E-05 768.840345420927 772.847688061341 73.385 0.57291 73.385 73.102 73.674 0 131 37 5 0 0 0 0.046844 1 37900 29.936 29.813 1 1.7877 1.4799 0 1640300 544130 1096200 32194 1440 12217 12558 50182 50182 SNELGDVGVHCVLQGLQTPSCK 22 1 0 Unmodified _SNELGDVGVHCVLQGLQTPSCK_ 0 0 0 A0A024RC87;A0A140VJT8;P13489;E9PMN0;E9PIK5;E9PMJ3;E9PLZ3;E9PIM9 A0A024RC87 A0A024RC87 RNH1 Ribonuclease inhibitor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.7269 3 800.054503 2397.14168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.871 1 96.871 96.371 97.371 0 0 0 0 0.0027009 1 59065 53.779 45.179 1 32195 355 12218 12559 50183 50183 SNELGDVGVHCVLQGLQTPSCK 22 1 0 Unmodified _SNELGDVGVHCVLQGLQTPSCK_ 0 0 0 A0A024RC87;A0A140VJT8;P13489;E9PMN0;E9PIK5;E9PMJ3;E9PLZ3;E9PIM9 A0A024RC87 A0A024RC87 RNH1 Ribonuclease inhibitor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.061 3 800.054503 2397.14168 NaN NaN NaN 0.93413 0.00074735 NaN NaN NaN NaN 96.175 0.084846 96.174 96.138 96.223 -7.6294E-06 0 0 0 0.0034197 1 59948 34.009 25.92 1 NaN NaN 0 4987900 0 4987900 32196 355 12218 12559 50184 50184 SNESVDIQDQEEK 13 1 0 Unmodified _SNESVDIQDQEEK_ 0 0 0 Q5UIP0 Q5UIP0 Q5UIP0 RIF1 Telomere-associated protein RIF1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.8469 2 760.839182 1519.66381 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.748 1 28.748 28.248 29.248 1.9073E-06 0 0 0 0.01593 1 13681 50.284 21.557 1 32197 1829 12219 12560 50185 50185 SNESVDIQDQEEK 13 1 0 Unmodified _SNESVDIQDQEEK_ 0 0 0 Q5UIP0 Q5UIP0 Q5UIP0 RIF1 Telomere-associated protein RIF1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.8466 2 760.839182 1519.66381 NaN NaN NaN 0.24237 0.00018441 NaN NaN NaN NaN 28.045 0.12882 28.045 27.947 28.076 0 0 0 0 0.0031445 1 13277 66.267 38.938 1 NaN NaN 0 3187200 0 3187200 32198 1829 12219 12560 50186 50186 SNESVDIQDQEEK 13 1 0 Unmodified _SNESVDIQDQEEK_ 0 0 0 Q5UIP0 Q5UIP0 Q5UIP0 RIF1 Telomere-associated protein RIF1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.8474 2 760.839182 1519.66381 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.082 1 28.082 27.582 28.582 0 0 0 0 0.00020549 1 13292 90.913 55.402 1 32199 1829 12219 12560 50187 50187 SNESVDIQDQEEK 13 1 0 Unmodified _SNESVDIQDQEEK_ 0 0 0 Q5UIP0 Q5UIP0 Q5UIP0 RIF1 Telomere-associated protein RIF1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.8407 2 760.839182 1519.66381 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.102 1 28.102 27.602 28.602 0 0 0 0 0.011501 1 13309 53.237 45.017 1 32200 1829 12219 12560 50188 50188 SNFSLAILNVGAPAAGMNAAVR 22 0 1 Oxidation (M) _SNFSLAILNVGAPAAGM(ox)NAAVR_ SNFSLAILNVGAPAAGM(1)NAAVR SNFSLAILNVGAPAAGM(51.21)NAAVR 0 1 0 P17858;Q7L2M7;Q9BSP4;Q59GI2 P17858 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1086.0703 2 1080.56514 2159.11572 59144.23 0.045033 4.8661E-05 -0.29941 -0.00032353 -0.25438 -0.00027487 1081.06557569436 1085.56899025781 117.82 0.32673 117.82 117.67 118 -7.6294E-06 74 19 6 0 0 0 3.4065E-07 2 75408 51.211 51.211 1 1.222 1.2837 0 11196000 5441300 5754300 32201 1495 12220 12561 50189;50190 50189 1250 SNFSLAILNVGAPAAGMNAAVR 22 0 1 Oxidation (M) _SNFSLAILNVGAPAAGM(ox)NAAVR_ SNFSLAILNVGAPAAGM(1)NAAVR SNFSLAILNVGAPAAGM(53)NAAVR 0 1 0 P17858;Q7L2M7;Q9BSP4;Q59GI2 P17858 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1086.0709 2 1080.56514 2159.11572 NaN NaN NaN 0.02073 2.24E-05 NaN NaN NaN NaN 117.31 0.29803 117.31 117.15 117.44 7.6294E-06 0 0 0 2.353E-05 1 76871 53.001 38.648 1 NaN NaN 0 7006400 0 7006400 32202 1495 12220 12561 50191 50191 1250 SNFSNSADDIK 11 1 0 Unmodified _SNFSNSADDIK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.2794 2 599.272749 1196.53095 79355.63 0.79897 0.0004788 -0.26131 -0.0001566 0.53767 0.00032221 599.272668362256 603.279613729447 30.196 0.86163 30.196 29.9 30.762 0 376 76 6 0 0 0 4.3615E-10 3 14601 131.12 125.39 1 0.74979 0.84847 0 87448000 51324000 36124000 32203 1568 12221 12562 50192;50193;50194 50193 SNFSNSADDIK 11 1 0 Unmodified _SNFSNSADDIK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.28 2 599.272749 1196.53095 78467.05 1.1326 0.00067873 -0.43998 -0.00026367 0.69261 0.00041506 599.272437697166 603.279601225224 29.74 0.91681 29.74 29.411 30.328 1.9073E-06 360 73 7 0 0 0 3.2465E-17 4 14274 160.36 157.01 1 0.72771 0.82114 0 127120000 74109000 53008000 32204 1568 12221 12562 50195;50196;50197;50198 50196 SNFSNSADDIK 11 1 0 Unmodified _SNFSNSADDIK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.2817 2 599.272749 1196.53095 79594.62 0.42485 0.0002546 0.83007 0.00049744 1.2549 0.00075204 599.272725950901 603.281021012575 37.677 0.48479 37.677 37.448 37.933 0 118 37 4 0 0 0 0.01294 1 19540 47.603 42.99 1 0.94831 1.0062 0 23436000 11132000 12304000 32205 1568 12221 12562 50199 50199 SNFSNSADDIK 11 1 0 Unmodified _SNFSNSADDIK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.2723 2 599.272749 1196.53095 77861.81 0.51166 0.00030663 0.048004 2.8767E-05 0.55967 0.00033539 599.272710312934 603.279879011335 34.881 1.2822 34.881 34.267 35.55 0 581 106 10 0 0 0 0.00035741 3 15607 84.817 81.979 1 0.92984 0.77802 0 50737000 25962000 24775000 32206 1568 12221 12562 50200;50201;50202 50201 SNFSNSADDIK 11 1 0 Unmodified _SNFSNSADDIK_ 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.2803 2 599.272749 1196.53095 77917.5 0.73257 0.00043901 -0.26143 -0.00015667 0.47113 0.00028234 599.272555311128 603.2796466341 34.921 1.2248 34.921 34.467 35.692 0 501 100 10 0 0 0 0.005532 1 14904 56.043 52.689 1 0.93205 0.79151 0 72121000 38668000 33453000 32207 1568 12221 12562 50203 50203 SNGLIHSANVR 11 0 1 Unmodified _SNGLIHSANVR_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;Q5JR91 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3163 2 584.315086 1166.61562 77431.11 0.61059 0.00035678 -0.27966 -0.00016341 0.33093 0.00019337 584.314291472529 589.319290406435 25.235 0.4069 25.235 25.084 25.49 0 49 14 6 0 0 0 2.2591E-05 1 10828 103.91 103.91 1 0.74801 0.83321 0 43739000 20062000 23676000 32208 626 12222 12563 50204 50204 SNGLIHSANVR 11 0 1 Unmodified _SNGLIHSANVR_ 0 0 0 A8K3S3;A0A140VKF1;Q99661;B7Z6Q6;Q5JR91 A8K3S3 A8K3S3 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.8789 3 389.879149 1166.61562 97666.41 0.241 9.396E-05 -0.22464 -8.7583E-05 0.016358 6.3776E-06 389.878991137475 393.215043907443 25.209 0.26903 25.209 25.084 25.353 0 31 9 5 0 0 0 0.0038316 1 10876 48.442 48.442 1 0.90991 0.97211 0 24808000 12379000 12430000 32209 626 12222 12563 50205 50205 SNHLLEDSLK 10 1 0 Unmodified _SNHLLEDSLK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.311 2 578.303852 1154.59315 78440.06 0.58165 0.00033637 0.76606 0.00044302 1.3477 0.00077939 578.303850670278 582.311332263919 41.771 0.42316 41.771 41.6 42.023 3.8147E-06 101 33 5 0 0 0 0.00090659 1 22045 79.311 59.949 1 1.1603 1.2083 0 16854000 7552200 9302000 32210 1581 12223 12564 50206 50206 SNHLLEDSLK 10 1 0 Unmodified _SNHLLEDSLK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.3109 2 578.303852 1154.59315 81718.57 0.0996 5.7599E-05 0.59823 0.00034596 0.69783 0.00040356 578.30413438055 582.311175849562 46.928 0.39092 46.928 46.747 47.138 -3.8147E-06 98 29 5 0 0 0 0.035638 1 22121 40.533 31.67 1 1.5364 1.2774 0 1561700 612820 948880 32211 1581 12223 12564 50207 50207 SNIDALLSR 9 0 1 Unmodified _SNIDALLSR_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.7791 2 494.774731 987.534909 85443.09 0.23992 0.00011871 -0.50375 -0.00024924 -0.26383 -0.00013053 494.77423483526 499.77884453 72.963 0.34747 72.963 72.75 73.098 0 155 27 8 0 0 0 0.00079125 1 42747 94.309 57.608 1 1.062 1.1811 0 76037000 35719000 40318000 32212 741 12224 12565 50208 50208 SNIDALLSR 9 0 1 Unmodified _SNIDALLSR_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.779 2 494.774731 987.534909 85706.16 -0.15461 -7.6498E-05 -0.20022 -9.9064E-05 -0.35483 -0.00017556 494.774346926133 499.778892073014 71.667 0.30609 71.667 71.435 71.742 0 111 22 8 0 0 0 0.0025006 2 42928 74.173 48.614 1 0.94518 1.0761 0 129250000 72872000 56382000 32213 741 12224 12565 50209;50210 50210 SNIDALLSR 9 0 1 Unmodified _SNIDALLSR_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.7788 2 494.774731 987.534909 85403.42 0.16689 8.2571E-05 -0.42485 -0.0002102 -0.25796 -0.00012763 494.774260173553 499.778848256884 83.451 0.21864 83.451 83.329 83.548 0 62 13 7 0 0 0 0.00015377 2 45491 108.15 74.19 1 0.57465 0.47154 0 17076000 10650000 6425900 32214 741 12224 12565 50211;50212 50212 SNIDALLSR 9 0 1 Unmodified _SNIDALLSR_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.7748 2 494.774731 987.534909 84246.54 0.28398 0.0001405 -0.37023 -0.00018318 -0.086251 -4.2675E-05 494.774339561554 499.77878451455 83.584 0.21044 83.584 83.466 83.676 0 48 10 7 0 0 0 1.0147E-07 2 44786 139.38 88.185 1 0.57513 0.47775 0 15365000 10123000 5242300 32215 741 12224 12565 50213;50214 50214 SNIHSSVMASPGGLSAVR 18 0 1 Oxidation (M) _SNIHSSVM(ox)ASPGGLSAVR_ SNIHSSVM(1)ASPGGLSAVR SNIHSSVM(44.46)ASPGGLSAVR 0 1 0 B4DSL6;A8K5D9;A0A024RA49;Q9NQW6;H7C1C2;H7C3S1 B4DSL6 B4DSL6 ANLN Actin-binding protein anillin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 898.4539 2 893.449242 1784.88393 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.604 1 46.604 46.104 47.104 0 0 0 0 0.0043794 1 25211 44.457 30.299 1 32216 294 12225 12566 50215 50215 213 SNILLLGPTGSGK 13 1 0 Unmodified _SNILLLGPTGSGK_ 0 0 0 Q9H072;A0A024R5X7;O76031 Q9H072 Q9H072 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.8726 2 628.864077 1255.7136 80934.15 0.89735 0.00056431 -0.18257 -0.00011481 0.71478 0.0004495 628.863804739384 632.871052751757 86.404 0.3985 86.404 86.231 86.63 0 112 29 6 0 0 0 0.0012305 2 52002 58.674 52.893 1 1.3699 1.4561 0 15848000 4317700 11530000 32217 191 12226 12567 50216;50217 50216 SNILLLGPTGSGK 13 1 0 Unmodified _SNILLLGPTGSGK_ 0 0 0 Q9H072;A0A024R5X7;O76031 Q9H072 Q9H072 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.8642 2 628.864077 1255.7136 NaN NaN NaN -0.76938 -0.00048383 NaN NaN NaN NaN 85.422 0.34494 85.422 85.263 85.608 7.6294E-06 0 0 0 0.01062 1 52582 62.14 51.617 1 NaN NaN 0 6080700 6080700 0 32218 191 12226 12567 50218 50218 SNILSNEMK 9 1 0 Oxidation (M) _SNILSNEM(ox)K_ SNILSNEM(1)K SNILSNEM(139.74)K 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2651 2 526.258056 1050.50156 81576.05 0.42968 0.00022612 0.47469 0.00024981 0.90437 0.00047593 526.25832010976 530.265482625361 26.804 0.48338 26.804 26.599 27.083 1.9073E-06 179 30 8 0 0 0 4.7575E-08 2 12076 139.74 139.74 1 0.96123 1.0841 0 131060000 61960000 69102000 32219 2070 12227 12568 50219;50220 50219 1907 SNILSNEMK 9 1 0 Oxidation (M) _SNILSNEM(ox)K_ SNILSNEM(1)K SNILSNEM(90.64)K 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.2675 2 526.258056 1050.50156 78902.8 0.37097 0.00019522 0.24253 0.00012763 0.6135 0.00032286 526.258202885016 530.265398974174 26.453 0.76 26.453 26.234 26.994 1.9073E-06 174 40 8 0 0 0 0.00051031 2 11763 90.64 90.64 1 1.0348 1.1786 0 148990000 73573000 75416000 32220 2070 12227 12568 50221;50222 50221 1907 SNILVFK 7 1 0 Unmodified _SNILVFK_ 0 0 0 Q0VDF9 Q0VDF9 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.7579 2 410.749996 819.485439 93511.55 0.57179 0.00023486 0.32366 0.00013294 0.89545 0.00036781 410.749816458112 414.757593948618 71.846 0.20416 71.846 71.764 71.968 0 49 18 4 0 0 0 0.041494 1 43118 58.981 36.529 1 1.9104 1.9778 0 9777500 3579700 6197700 32221 1697 12228 12569 50223 50223 SNLAYDIVQLPTGLTGIK 18 1 0 Unmodified _SNLAYDIVQLPTGLTGIK_ 0 0 0 O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;Q7KYN0 O14992 O14992 HS24/p52;HSPA4;HEL-S-5a;HS24/P52 Heat shock 70 kDa protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.0406 2 952.030391 1902.04623 67035.93 0.91533 0.00087142 -0.3695 -0.00035178 0.54583 0.00051965 952.029736021249 956.037512797491 126.08 0.38269 126.08 125.85 126.23 -7.6294E-06 136 29 8 0 0 0 1.7065E-05 1 81938 74.678 74.678 1 1.9095 1.923 0 7213300 2704300 4509000 32222 404 12229 12570 50224 50224 SNLAYDIVQLPTGLTGIK 18 1 0 Unmodified _SNLAYDIVQLPTGLTGIK_ 0 0 0 O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;Q7KYN0 O14992 O14992 HS24/p52;HSPA4;HEL-S-5a;HS24/P52 Heat shock 70 kDa protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 952.5329 2 952.030391 1902.04623 65358.91 0.81892 0.00077964 -0.6225 -0.00059264 0.19642 0.000187 952.531360798903 956.538253428914 125.63 0.33044 125.63 125.47 125.8 0 83 21 6 0 0 0 2.7368E-05 2 83733 68.034 68.034 1 1.7937 1.8188 0 9076900 3564800 5512100 32223 404 12229 12570 50225;50226 50226 SNLEGSLK 8 1 0 Unmodified _SNLEGSLK_ 0 0 0 O14646;B3KT33 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 424.2298 2 424.229625 846.444697 94797.3 0.050709 2.1512E-05 0.43549 0.00018475 0.48619 0.00020626 424.22963526606 428.236781581533 27.461 0.3025 27.461 27.276 27.579 0 50 17 4 0 0 0 0.015554 1 12677 61.679 28.163 1 0.81376 0.8255 0 13423000 7482100 5940900 32224 1366 12230 12571 50227 50227 SNLGSVVLQLK 11 1 0 Unmodified _SNLGSVVLQLK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.3482 2 579.348063 1156.68157 80468.08 0.63288 0.00036666 -0.024528 -1.421E-05 0.60836 0.00035245 579.347958433386 583.355173274555 95.51 0.90804 95.51 95.03 95.938 0 352 71 7 0 0 0 0.0004546 2 57935 77.192 77.192 1 1.0942 1.2391 0 99715000 45506000 54209000 32225 1379 12231 12572 50228;50229 50229 SNLGSVVLQLK 11 1 0 Unmodified _SNLGSVVLQLK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3485 2 579.348063 1156.68157 80052.76 0.77651 0.00044987 -0.079709 -4.6179E-05 0.6968 0.00040369 579.347940848368 583.35508869238 94.581 0.90269 94.581 94.108 95.01 -7.6294E-06 379 75 7 0 0 0 6.4917E-08 2 58708 115.06 115.06 1 1.1085 1.2413 0 82440000 36805000 45634000 32226 1379 12231 12572 50230;50231 50231 SNLGSVVLQLK 11 1 0 Unmodified _SNLGSVVLQLK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.3486 2 579.348063 1156.68157 80069.93 0.66395 0.00038466 -0.15928 -9.2279E-05 0.50467 0.00029238 579.347898146234 583.35499622572 109.01 0.68555 109.01 108.78 109.46 -7.6294E-06 174 32 8 0 0 0 0.00080839 2 62689 72.325 72.325 1 1.1844 0.92858 0 16735000 6695400 10040000 32227 1379 12231 12572 50232;50233 50233 SNLGSVVLQLK 11 1 0 Unmodified _SNLGSVVLQLK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.3488 2 579.348063 1156.68157 79563.39 0.52592 0.00030469 0.015737 9.1172E-06 0.54166 0.00031381 579.347917503886 583.355102213024 108.82 0.64552 108.82 108.59 109.24 0 165 31 7 0 0 0 0.0073711 1 61641 52.725 52.725 1 1.2447 0.99909 0 22157000 9541800 12615000 32228 1379 12231 12572 50234 50234 SNLLWDTGVFR 11 0 1 Unmodified _SNLLWDTGVFR_ 0 0 0 W0HJ78;B0QYD3;Q9UH17;Q6ICH2;B2CML4;Q96AK3 W0HJ78;Q6ICH2 W0HJ78 APOBEC3B;bK150C2.9;APOBEC3DE;APOBEC3D DNA dC->dU-editing enzyme APOBEC-3B;DNA dC->dU-editing enzyme APOBEC-3D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.3413 2 654.340769 1306.66699 76583.61 0.95426 0.00062441 0.087715 5.7396E-05 1.042 0.00068181 654.340564626529 659.3452111105 111.64 0.67305 111.64 111.33 112 0 141 45 5 0 0 0 0.0040722 1 71999 58.676 58.676 1 0.42765 0.42783 0 9080500 6003600 3076900 32229 807;823 12232 12573 50235 50235 SNLMDAISFVLGEK 14 1 0 Oxidation (M) _SNLM(ox)DAISFVLGEK_ SNLM(1)DAISFVLGEK SNLM(62.09)DAISFVLGEK 0 1 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709;Q68EN4;H0Y7K8;Q5H934;Q7Z4C6 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.3962 2 770.389799 1538.76504 71822.48 1.0201 0.0007859 0.63629 0.00049019 1.6564 0.0012761 770.38993562025 774.396627174035 124.74 0.47883 124.74 124.48 124.96 0 142 33 8 0 0 0 0.00012703 1 80954 62.088 62.088 1 1.0429 1.0563 0 5771800 2778000 2993800 32230 1739 12233 12574 50236 50236 1574 SNLMDAISFVLGEK 14 1 0 Oxidation (M) _SNLM(ox)DAISFVLGEK_ SNLM(1)DAISFVLGEK SNLM(55.45)DAISFVLGEK 0 1 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709;Q68EN4;H0Y7K8;Q5H934;Q7Z4C6 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.8983 2 770.389799 1538.76504 71755.92 1.0409 0.0008019 -0.12408 -9.5589E-05 0.91683 0.00070631 770.389899018426 774.396858305853 125.63 0.41214 125.63 125.42 125.83 -7.6294E-06 118 25 6 0 0 0 0.00057711 1 81606 55.452 55.452 1 1.4042 1.4141 0 4919500 2170600 2748900 32231 1739 12233 12574 50237 50237 1574 SNLMDAISFVLGEK 14 1 0 Oxidation (M) _SNLM(ox)DAISFVLGEK_ SNLM(1)DAISFVLGEK SNLM(57.8)DAISFVLGEK 0 1 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709;Q68EN4;H0Y7K8;Q5H934;Q7Z4C6 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.3987 2 770.389799 1538.76504 70874.98 0.98374 0.00075786 0.59267 0.00045658 1.5764 0.0012144 770.390525615917 774.396215807604 124.32 0.65779 124.32 124.06 124.72 0 131 41 6 0 0 0 0.00041776 1 82650 57.802 57.802 1 1.0561 1.0577 0 6774500 3252600 3521900 32232 1739 12233 12574 50238 50238 1574 SNLMVATGDLAIR 13 0 1 Oxidation (M) _SNLM(ox)VATGDLAIR_ SNLM(1)VATGDLAIR SNLM(132.17)VATGDLAIR 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.8692 2 688.863751 1375.71295 71357.28 0.77393 0.00053313 -0.10455 -7.2023E-05 0.66938 0.00046111 688.863655884319 693.867920529377 82.984 0.84088 82.984 82.738 83.579 0 396 70 8 0 0 0 6.5492E-14 2 49541 132.17 112.93 1 1.2421 1.4605 0 229340000 101920000 127420000 32233 908 12234 12575 50239;50240 50239 747 SNLMVATGDLAIR 13 0 1 Oxidation (M) _SNLM(ox)VATGDLAIR_ SNLM(1)VATGDLAIR SNLM(174.57)VATGDLAIR 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8648 2 688.863751 1375.71295 70405.51 0.60715 0.00041825 -0.52879 -0.00036426 0.078367 5.3984E-05 688.863535007724 693.867705715793 82.059 0.9933 82.059 81.5 82.494 -7.6294E-06 503 86 9 0 0 0 2.5229E-31 2 50099 174.57 151.25 1 1.2075 1.401 0 324780000 153520000 171260000 32234 908 12234 12575 50241;50242 50242 747 SNLMVATGDLAIR 13 0 1 Oxidation (M) _SNLM(ox)VATGDLAIR_ SNLM(1)VATGDLAIR SNLM(115.14)VATGDLAIR 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.8691 2 688.863751 1375.71295 72089.76 0.67252 0.00046327 0.038425 2.6469E-05 0.71094 0.00048974 688.863285499461 693.86819477414 95.338 1.067 95.338 94.855 95.922 -7.6294E-06 322 75 6 0 0 0 4.8221E-09 2 53372 115.14 83.642 1 1.1259 0.93648 0 21774000 9947200 11827000 32235 908 12234 12575 50243;50244 50244 747 SNLMVATGDLAIR 13 0 1 Oxidation (M) _SNLM(ox)VATGDLAIR_ SNLM(1)VATGDLAIR SNLM(96.1)VATGDLAIR 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.8683 2 688.863751 1375.71295 73271.09 0.47099 0.00032445 0.47893 0.00032992 0.94992 0.00065436 688.863419884567 693.868443191734 95.279 1.048 95.279 94.808 95.856 -7.6294E-06 342 72 8 0 0 0 2.7903E-05 1 52506 96.103 69.589 1 1.187 1.011 0 19611000 9523500 10088000 32236 908 12234 12575 50245 50245 747 SNLMVATGDLAIR 13 0 1 Unmodified _SNLMVATGDLAIR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.8671 2 680.866294 1359.71803 73397.18 0.70443 0.00047962 0.45926 0.00031269 1.1637 0.00079231 680.866327173041 685.870778809473 109.58 0.65672 109.58 109.15 109.8 -7.6294E-06 131 32 8 0 0 0 0.00030952 2 63146 65.179 65.179 1 1.3926 1.1634 0 10409000 3840000 6568800 32237 908 12234 12576 50246;50247 50247 SNLMVATGDLAIR 13 0 1 Unmodified _SNLMVATGDLAIR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.8712 2 680.866294 1359.71803 74025.51 0.73474 0.00050026 0.52223 0.00035557 1.257 0.00085583 680.866122706438 685.870687744974 109.38 0.659 109.38 109.03 109.69 -7.6294E-06 157 29 8 0 0 0 0.00014941 2 62068 84.289 66.816 1 1.6705 1.3518 0 11676000 4595600 7079900 32238 908 12234 12576 50248;50249 50248 SNLVDNTNQVEVLQR 15 0 1 Unmodified _SNLVDNTNQVEVLQR_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;B4DS24;Q9HBZ9;Q7Z4W5;H3BN59;H3BMQ5;H3BTB3 I3L0H8 I3L0H8 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.449 2 864.947389 1727.88023 66082.8 0.44621 0.00038595 0.2103 0.0001819 0.65651 0.00056785 864.947625320684 869.951507463285 74.679 0.5951 74.679 74.387 74.982 0 236 49 7 0 0 0 2.8411E-31 2 43827 161.93 161.93 1 2.7942 3.0127 0 48066000 10485000 37580000 32239 593 12235 12577 50250;50251 50251 SNLVDNTNQVEVLQR 15 0 1 Unmodified _SNLVDNTNQVEVLQR_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;B4DS24;Q9HBZ9;Q7Z4W5;H3BN59;H3BMQ5;H3BTB3 I3L0H8 I3L0H8 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 864.949 2 864.947389 1727.88023 65883.02 0.35366 0.0003059 0.40682 0.00035188 0.76048 0.00065777 864.947685043195 869.951722027108 73.64 0.56016 73.64 73.338 73.898 0 246 47 7 0 0 0 3.9078E-15 2 44167 128.85 128.85 1 2.9008 3.2339 0 43947000 11983000 31964000 32240 593 12235 12577 50252;50253 50253 SNLVDNTNQVEVLQR 15 0 1 Unmodified _SNLVDNTNQVEVLQR_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;B4DS24;Q9HBZ9;Q7Z4W5;H3BN59;H3BMQ5;H3BTB3 I3L0H8 I3L0H8 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 865.4486 2 864.947389 1727.88023 67138.04 0.4174 0.00036103 0.0035918 3.1067E-06 0.42099 0.00036413 864.947477188986 869.951418209654 85.354 0.59547 85.354 85.109 85.704 0 180 37 8 0 0 0 0.00022059 2 46628 64.65 64.65 1 1.7814 1.5262 0 6089800 2246500 3843300 32241 593 12235 12577 50254;50255 50255 SNLVDNTNQVEVLQR 15 0 1 Unmodified _SNLVDNTNQVEVLQR_ 0 0 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;B4DS24;Q9HBZ9;Q7Z4W5;H3BN59;H3BMQ5;H3BTB3 I3L0H8 I3L0H8 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 869.9502 2 864.947389 1727.88023 65844.23 0.39251 0.0003395 0.1565 0.00013536 0.54901 0.00047486 865.448316521382 869.95170277554 85.563 0.54788 85.563 85.291 85.838 0 184 33 8 0 0 0 0.0013828 1 45916 47.915 47.915 1 1.6703 1.3895 0 6114100 2110400 4003700 32242 593 12235 12577 50256 50256 SNLYIAESTSGR 12 0 1 Unmodified _SNLYIAESTSGR_ 0 0 0 E7ESL0;J3KQY1;Q9NWU5 E7ESL0 E7ESL0 MRPL22 39S ribosomal protein L22, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.3228 2 649.322773 1296.63099 76932.88 0.76788 0.0004986 -0.03763 -2.4434E-05 0.73025 0.00047417 649.32305286711 654.326807712036 47.772 0.48961 47.772 47.475 47.965 0 129 44 5 0 0 0 0.0045334 2 25918 53.252 53.252 1 1.1152 1.1576 0 22508000 10159000 12348000 32243 1222 12236 12578 50257;50258 50257 SNLYIAESTSGR 12 0 1 Unmodified _SNLYIAESTSGR_ 0 0 0 E7ESL0;J3KQY1;Q9NWU5 E7ESL0 E7ESL0 MRPL22 39S ribosomal protein L22, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.3274 2 649.322773 1296.63099 75575.06 0.91926 0.0005969 0.13321 8.6497E-05 1.0525 0.00068339 649.322936701053 654.327076981869 46.615 0.56891 46.615 46.357 46.926 0 169 47 5 0 0 0 0.00060985 3 25721 68.44 62.136 1 1.307 1.404 0 25511000 10332000 15180000 32244 1222 12236 12578 50259;50260;50261 50260 SNLYIAESTSGR 12 0 1 Unmodified _SNLYIAESTSGR_ 0 0 0 E7ESL0;J3KQY1;Q9NWU5 E7ESL0 E7ESL0 MRPL22 39S ribosomal protein L22, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.3274 2 649.322773 1296.63099 76074.64 0.52247 0.00033925 -0.64163 -0.00041662 -0.11916 -7.7375E-05 649.322554931332 654.326399920995 55.397 0.47881 55.397 55.195 55.674 0 87 25 6 0 0 0 0.0091928 2 27186 47.288 47.288 1 0.97274 0.84605 0 1794800 891000 903840 32245 1222 12236 12578 50262;50263 50263 SNMDNMFESYINNLR 15 0 1 2 Oxidation (M) _SNM(ox)DNM(ox)FESYINNLR_ SNM(1)DNM(1)FESYINNLR SNM(93.96)DNM(93.96)FESYINNLR 0 2 0 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.9075 2 940.4011 1878.78765 63820.58 0.73072 0.00068717 -0.28243 -0.0002656 0.44829 0.00042157 940.902607628867 945.405187588372 98.161 0.8705 98.161 97.825 98.695 0 463 71 10 0 0 0 1.0412E-05 2 59795 93.959 85.446 1 2.3958 2.6674 0 79685000 17964000 61721000 + 32246 1156 12237 12579 50264;50265 50264 869;870 SNMDNMFESYINNLR 15 0 1 2 Oxidation (M) _SNM(ox)DNM(ox)FESYINNLR_ SNM(1)DNM(1)FESYINNLR SNM(115.14)DNM(115.14)FESYINNLR 0 2 0 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.4068 2 940.4011 1878.78765 63369.62 0.58582 0.00055091 -0.28663 -0.00026955 0.29919 0.00028136 940.401620403452 945.906508357055 97.489 0.88299 97.489 97.145 98.028 0 432 69 9 0 0 0 4.6635E-10 2 60772 115.14 105.08 1 2.3761 2.7126 0 92161000 22904000 69257000 + 32247 1156 12237 12579 50266;50267 50266 869;870 SNMDNMFESYINNLR 15 0 1 2 Oxidation (M) _SNM(ox)DNM(ox)FESYINNLR_ SNM(1)DNM(1)FESYINNLR SNM(43.54)DNM(43.54)FESYINNLR 0 2 0 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 940.4043 2 940.4011 1878.78765 63295.68 0.82843 0.00077906 -0.022573 -2.1228E-05 0.80586 0.00075783 940.401379733538 945.404976488285 111.34 0.54801 111.34 111.13 111.68 -7.6294E-06 109 25 7 0 0 0 0.0034882 1 64453 43.544 43.544 1 0.64171 0.54032 0 4583900 2694300 1889600 + 32248 1156 12237 12579 50268 50268 869;870 SNMFFGLTPLYGVR 14 0 1 Oxidation (M) _SNM(ox)FFGLTPLYGVR_ SNM(1)FFGLTPLYGVR SNM(77.64)FFGLTPLYGVR 0 1 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.4147 2 809.408326 1616.8021 70475.98 0.68475 0.00055424 0.22129 0.00017911 0.90604 0.00073335 809.909162127725 814.412896335616 117.79 0.41536 117.79 117.58 118 7.6294E-06 108 25 6 0 0 0 7.018E-05 1 75467 77.64 65.909 1 1.0671 1.1004 0 6241000 2710300 3530700 32249 1680 12238 12580 50269 50269 1493 SNMGHPEPASGLAALAK 17 1 0 Oxidation (M) _SNM(ox)GHPEPASGLAALAK_ SNM(1)GHPEPASGLAALAK SNM(41.19)GHPEPASGLAALAK 0 1 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.9503 3 556.278761 1665.81445 NaN NaN NaN -0.13955 -7.763E-05 NaN NaN NaN NaN 52.971 0.44962 52.971 52.715 53.165 0 0 0 0 0.018269 1 30201 41.186 37.084 1 NaN NaN 0 12305000 0 12305000 32250 587 12239 12581 50270 50270 441 SNMSPHGLPAR 11 0 1 Oxidation (M) _SNM(ox)SPHGLPAR_ SNM(1)SPHGLPAR SNM(46.84)SPHGLPAR 0 1 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 398.1978 3 394.86099 1181.56114 109567.3 0.13473 5.3198E-05 -0.6228 -0.00024592 -0.48807 -0.00019272 394.860072042066 398.196917983389 19.079 0.19795 19.079 18.998 19.196 0 24 9 5 0 0 0 0.003655 1 5556 46.844 34.267 1 1.1456 1.1772 0 4937600 2320800 2616800 32251 1223 12240 12582 50271 50271 932 SNNIINETTTR 11 0 1 Unmodified _SNNIINETTTR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5;Q6NSG3;Q58F29 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.8233 2 631.820398 1261.62624 75458.71 0.68285 0.00043144 0.8564 0.00054109 1.5392 0.00097253 631.820538371672 636.825452641573 36.844 1.0135 36.844 36.4 37.413 0 416 92 6 0 0 0 7.7755E-10 1 18569 125.74 112.04 1 0.83582 0.98892 0 319760000 178450000 141310000 32252 2070 12241 12583 50272 50272 SNNIINETTTR 11 0 1 Unmodified _SNNIINETTTR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5;Q6NSG3;Q58F29 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8264 2 631.820398 1261.62624 75329.84 0.69214 0.00043731 0.51942 0.00032818 1.2116 0.00076549 631.820332997832 636.825212462681 36.009 1.0501 36.009 35.593 36.643 0 369 87 6 0 0 0 1.3193E-41 2 18466 237.51 223.93 1 0.85005 0.98542 0 303360000 160960000 142400000 32253 2070 12241 12583 50273;50274 50273 SNNIINETTTR 11 0 1 Unmodified _SNNIINETTTR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5;Q6NSG3;Q58F29 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.8199 2 631.820398 1261.62624 76321.22 0.44718 0.00028253 0.45394 0.00028681 0.90112 0.00056934 631.820615281816 636.824903231415 42.222 1.3936 42.222 41.706 43.1 0 421 101 6 0 0 0 0.029282 1 19566 39.266 39.266 1 1.8056 1.5564 0 69238000 23930000 45308000 32254 2070 12241 12583 50275 50275 SNNIINETTTR 11 0 1 Unmodified _SNNIINETTTR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5;Q6NSG3;Q58F29 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8247 2 631.820398 1261.62624 75309.34 0.27573 0.00017421 0.53043 0.00033514 0.80616 0.00050935 631.820719402645 636.82496506411 42.448 1.3413 42.448 41.966 43.308 0 373 91 6 0 0 0 0.0007588 3 19157 88.576 83.792 1 1.7558 1.5323 0 71377000 26481000 44896000 32255 2070 12241 12583 50276;50277;50278 50278 SNNVEMDWVLK 11 1 0 Oxidation (M) _SNNVEM(ox)DWVLK_ SNNVEM(1)DWVLK SNNVEM(50.11)DWVLK 0 1 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.8227 2 675.821552 1349.62855 NaN NaN NaN 1.9333 0.0013066 NaN NaN NaN NaN 76.661 0.60236 76.661 76.369 76.971 0 0 0 0 0.0094208 1 45371 50.108 38.943 1 NaN NaN 0 5681500 5681500 0 32256 1231 12242 12584 50279 50279 946 SNNVEMDWVLK 11 1 0 Oxidation (M) _SNNVEM(ox)DWVLK_ SNNVEM(1)DWVLK SNNVEM(85.35)DWVLK 0 1 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2 E9PCY7 E9PCY7 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.8281 2 675.821552 1349.62855 NaN NaN NaN -0.4863 -0.00032865 NaN NaN NaN NaN 75.683 0.68435 75.683 75.284 75.968 -7.6294E-06 0 0 0 0.0003599 1 45486 85.355 73.507 1 NaN NaN 0 11954000 0 11954000 32257 1231 12242 12584 50280 50280 946 SNPGGFGIAPHCLDEGTVR 19 0 1 Unmodified _SNPGGFGIAPHCLDEGTVR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.3205 3 661.982896 1982.92686 74537.77 0.62823 0.00041588 -0.24586 -0.00016275 0.38237 0.00025312 661.982790089868 665.653229431006 74.12 0.70847 74.12 73.855 74.564 0 423 59 10 0 0 0 9.5024E-06 1 43359 55.763 55.763 1 1.2139 1.3893 0 129700000 60248000 69452000 32258 1882 12243 12585 50281 50281 SNPGGFGIAPHCLDEGTVR 19 0 1 Unmodified _SNPGGFGIAPHCLDEGTVR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 997.4772 2 992.470706 1982.92686 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.064 1 74.064 73.564 74.564 0 0 0 0 0.00027574 1 43445 58.831 44.573 1 32259 1882 12243 12585 50282 50282 SNPGGFGIAPHCLDEGTVR 19 0 1 Unmodified _SNPGGFGIAPHCLDEGTVR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.3169 3 661.982896 1982.92686 74355.6 0.67742 0.00044844 -0.31094 -0.00020584 0.36648 0.0002426 662.317106601264 665.318979974901 72.767 0.59746 72.767 72.529 73.126 0 366 51 10 0 0 0 3.1505E-06 2 43561 73.21 73.21 1 1.1883 1.3604 0 165840000 81967000 83871000 32260 1882 12243 12585 50283;50284 50284 SNPGGFGIAPHCLDEGTVR 19 0 1 Unmodified _SNPGGFGIAPHCLDEGTVR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 997.9761 2 992.470706 1982.92686 63633.35 0.48419 0.00048054 -0.22778 -0.00022606 0.25641 0.00025448 992.97168000356 997.474589908433 72.849 0.29063 72.849 72.633 72.924 0 64 24 4 0 0 0 2.5175E-05 2 43628 70.47 63.89 1 1.0587 1.0701 0 19858000 10598000 9259800 32261 1882 12243 12585 50285;50286 50285 SNPGGFGIAPHCLDEGTVR 19 0 1 Unmodified _SNPGGFGIAPHCLDEGTVR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 992.471 2 992.470706 1982.92686 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.734 1 72.734 72.234 73.234 0 0 0 0 6.9178E-06 1 43647 78.069 59.801 1 32262 1882 12243 12585 50287 50287 SNPGGFGIAPHCLDEGTVR 19 0 1 Unmodified _SNPGGFGIAPHCLDEGTVR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.6537 3 661.982896 1982.92686 73839.77 0.55621 0.0003682 -0.31402 -0.00020788 0.24219 0.00016032 662.317091203287 665.318953764499 84.809 0.7674 84.809 84.505 85.272 0 449 54 12 0 0 0 1.2205E-05 3 46171 50.883 50.883 1 1.7167 1.4809 0 78093000 29786000 48306000 32263 1882 12243 12585 50288;50289;50290 50289 SNPGGFGIAPHCLDEGTVR 19 0 1 Unmodified _SNPGGFGIAPHCLDEGTVR_ 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.6547 3 661.982896 1982.92686 73851.06 0.69008 0.00045682 -0.28883 -0.0001912 0.40125 0.00026562 662.317068900488 665.318947550106 84.86 0.69096 84.86 84.535 85.226 0 393 48 12 0 0 0 0.00010793 2 45394 43.116 43.116 1 1.709 1.4914 0 68082000 25110000 42971000 32264 1882 12243 12585 50291;50292 50291 SNPSVFVIFQK 11 1 0 Unmodified _SNPSVFVIFQK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3475 2 633.348063 1264.68157 78687.11 0.76381 0.00048376 -0.36461 -0.00023092 0.3992 0.00025283 633.347969828168 637.355124644621 107.36 0.84906 107.36 106.99 107.84 0 196 62 6 0 0 0 0.0014303 2 66745 67.563 67.563 1 1.6317 1.6035 0 20153000 7407600 12745000 32265 1873 12244 12586 50293;50294 50293 SNPSVFVIFQK 11 1 0 Unmodified _SNPSVFVIFQK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.3554 2 633.348063 1264.68157 78741.7 0.80934 0.00051259 -0.62012 -0.00039275 0.18922 0.00011984 633.347679690823 637.355035280988 106.63 0.74124 106.63 106.22 106.97 0 187 56 6 0 0 0 0.00043239 1 67852 78.934 78.934 1 1.4185 1.4343 0 16412000 6789100 9623000 32266 1873 12244 12586 50295 50295 SNPYYIVK 8 1 0 Unmodified _SNPYYIVK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2635 2 492.263468 982.512382 86677.84 0.3518 0.00017318 0.21676 0.0001067 0.56856 0.00027988 492.263517252992 496.270783995516 50.476 0.54234 50.476 50.28 50.822 0 120 48 4 0 0 0 0.028561 1 28518 53.166 32.884 1 1.08 1.1602 0 21471000 10256000 11215000 32267 803 12245 12587 50296 50296 SNQQLENDLNLMDIK 15 1 0 Oxidation (M) _SNQQLENDLNLM(ox)DIK_ SNQQLENDLNLM(1)DIK SNQQLENDLNLM(78.7)DIK 0 1 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0;Q6P1N4;Q96PA3 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.9385 2 895.93309 1789.85163 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.768 1 86.768 86.268 87.268 0 0 0 0 0.00031948 1 53485 78.705 67.492 1 32268 352 12246 12588 50297 50297 260 SNQQLVDIIEK 11 1 0 Unmodified _SNQQLVDIIEK_ 0 0 0 K7ENH2;B3KQ25;K7ESG5;K9J957;V9HWJ8;Q6FHK7;A0A024R203;P61289;K7EMD0;K7EPX6;K7EKR3 K7ENH2 K7ENH2 PSME3;HEL-S-283 Proteasome activator complex subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.8585 2 643.851167 1285.68778 NaN NaN NaN 0.067622 4.3539E-05 NaN NaN NaN NaN 80.758 0.48122 80.758 80.568 81.05 0 0 0 0 5.7514E-08 1 49334 110.38 96.79 1 NaN NaN 0 7800400 0 7800400 32269 99 12247 12589 50298 50298 SNQQNLGTIK 10 1 0 Unmodified _SNQQNLGTIK_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8;B4DS95;B4DXD1;E9PL69;B4DXB0 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.8034 2 551.796195 1101.57784 83377.28 0.6434 0.00035502 -0.63136 -0.00034838 0.012037 6.6419E-06 551.795296441906 555.802936279685 25.323 0.31259 25.323 25.187 25.5 -1.9073E-06 47 15 5 0 0 0 5.0594E-08 1 11006 115.71 115.71 1 2.1266 2.1956 0 12787000 3825600 8961600 32270 1014 12248 12590 50299 50299 SNRDELELELAENRK 15 1 2 Unmodified _SNRDELELELAENRK_ 0 0 2 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.3215 3 605.978028 1814.91225 NaN NaN NaN -0.058955 -3.5726E-05 NaN NaN NaN NaN 56.945 0.46433 56.945 56.694 57.158 -3.8147E-06 0 0 0 0.0058633 1 28711 48.899 44.921 1 NaN NaN 0 2421300 0 2421300 32271 186;1747;718 12249 12591 50300 50300 SNSEVEDVGPTSHNR 15 0 1 Unmodified _SNSEVEDVGPTSHNR_ 0 0 0 Q13206;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.3738 2 814.368972 1626.72339 69679.84 0.43825 0.0003569 0.236 0.00019219 0.67425 0.00054909 814.369141125343 819.37299023876 20.686 0.20399 20.686 20.559 20.763 0 29 8 6 0 0 0 0.00019854 1 7082 76.522 73.098 1 0.95638 0.9822 0 6448900 3172200 3276600 32272 1708 12250 12592 50301 50301 SNSEVEDVGPTSHNR 15 0 1 Unmodified _SNSEVEDVGPTSHNR_ 0 0 0 Q13206;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.8762 2 814.368972 1626.72339 67094.95 0.73845 0.00060137 -0.10095 -8.2213E-05 0.63749 0.00051916 814.368691539383 819.874310841742 20.577 0.21506 20.577 20.45 20.665 0 28 6 6 0 0 0 0.00014377 1 6834 79.82 73.975 1 1.19 1.2685 0 3634900 1447700 2187100 32273 1708 12250 12592 50302 50302 SNSGFLR 7 0 1 Unmodified _SNSGFLR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 390.7034 2 390.703577 779.392602 NaN NaN NaN 0.35037 0.00013689 NaN NaN NaN NaN 30.468 0.28416 30.468 30.321 30.605 0 0 0 0 0.032923 1 14886 78.616 30.7 1 NaN NaN 0 28969000 28969000 0 32274 925 12251 12593 50303 50303 SNSNAVSAIPINK 13 1 0 Unmodified _SNSNAVSAIPINK_ 0 0 0 Q96SH1;P05549;C9JXZ2;H7C5E5;C1K3N0 Q96SH1 Q96SH1 TFAP2A Transcription factor AP-2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.8544 2 657.854241 1313.69393 75703.88 0.39253 0.00025823 0.50622 0.00033302 0.89875 0.00059125 657.854073200519 661.862084413976 63.796 0.51652 63.796 63.576 64.093 0 168 43 6 0 0 0 0.021885 1 32803 35.348 35.348 1 1.1024 0.87017 0 3067200 1476000 1591100 32275 1448 12252 12594 50304 50304 SNSNAVSAIPINK 13 1 0 Unmodified _SNSNAVSAIPINK_ 0 0 0 Q96SH1;P05549;C9JXZ2;H7C5E5;C1K3N0 Q96SH1 Q96SH1 TFAP2A Transcription factor AP-2-alpha MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.8543 2 657.854241 1313.69393 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.329 1 64.329 63.829 64.829 0 0 0 0 0.019588 1 32417 47.844 37.014 1 32276 1448 12252 12594 50305 50305 SNSPLPVPPSK 11 1 0 Unmodified _SNSPLPVPPSK_ 0 0 0 V9HVZ0;A8K588;Q13247 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.819 2 561.811313 1121.60807 NaN NaN NaN 0.048286 2.7128E-05 NaN NaN NaN NaN 53.968 1.5085 53.968 53.492 55 0 0 0 0 0.016171 1 30393 54.27 44.283 1 NaN NaN 0 16274000 0 16274000 32277 748 12253 12595 50306 50306 SNSPLPVPPSK 11 1 0 Unmodified _SNSPLPVPPSK_ 0 0 0 V9HVZ0;A8K588;Q13247 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.8118 2 561.811313 1121.60807 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.065 1 54.065 53.565 54.565 0 0 0 0 0.051702 1 30347 43.297 19.868 1 32278 748 12253 12595 50307 50307 SNSQVPQQSHFTK 13 1 0 Unmodified _SNSQVPQQSHFTK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.3724 2 744.365504 1486.71645 NaN NaN NaN 0.22016 0.00016388 NaN NaN NaN NaN 20.191 0.18606 20.191 20.108 20.295 0 0 0 0 1.1196E-20 1 6686 134.98 112.29 1 NaN NaN 0 8354300 0 8354300 32279 44 12254 12596 50308 50308 SNSQVPQQSHFTK 13 1 0 Unmodified _SNSQVPQQSHFTK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.3724 2 744.365504 1486.71645 NaN NaN NaN -0.094517 -7.0355E-05 NaN NaN NaN NaN 20.118 0.23899 20.118 20.018 20.257 0 0 0 0 3.5939E-60 1 6448 182.92 161.45 1 NaN NaN 0 8016500 0 8016500 32280 44 12254 12596 50309 50309 SNSQVPQQSHFTK 13 1 0 Unmodified _SNSQVPQQSHFTK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.2509 3 496.579428 1486.71645 85243.05 -0.099002 -4.9162E-05 0.13515 6.7114E-05 0.036151 1.7952E-05 496.579485304026 499.250919935147 21.904 0.47096 21.904 21.622 22.093 0 83 17 9 0 0 0 0.037563 1 6851 16.666 11.951 1 1.537 1.2188 0 4627800 1804200 2823600 32281 44 12254 12596 50310 50310 SNSQVPQQSHFTK 13 1 0 Unmodified _SNSQVPQQSHFTK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.3725 2 744.365504 1486.71645 71104.06 0.38473 0.00028638 0.059894 4.4583E-05 0.44462 0.00033096 744.365741409063 748.372513991633 21.955 0.44006 21.955 21.653 22.093 0 63 16 7 0 0 0 0.0026206 1 6866 53.013 48.229 1 1.5773 1.242 0 4024000 1509600 2514400 32282 44 12254 12596 50311 50311 SNSQVPQQSHFTK 13 1 0 Unmodified _SNSQVPQQSHFTK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.3674 2 744.365504 1486.71645 70294.38 0.20695 0.00015405 0.062693 4.6667E-05 0.26964 0.00020071 744.365650750369 748.372867242572 21.927 0.32117 21.927 21.748 22.069 0 55 10 9 0 0 0 0.028157 2 6378 33.988 30.101 1 1.6198 1.2749 0 3865700 1512600 2353100 32283 44 12254 12596 50312;50313 50313 SNSQVPQQSHFTK 13 1 0 Unmodified _SNSQVPQQSHFTK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 499.2513 3 496.579428 1486.71645 84598.31 -0.25852 -0.00012838 0.067132 3.3337E-05 -0.19139 -9.5039E-05 496.579598161519 499.251056002602 21.93 0.32117 21.93 21.748 22.069 -1.9073E-06 64 10 11 0 0 0 0.062979 1 6372 10.658 5.857 1 1.6221 1.3285 0 4938900 1925300 3013500 32284 44 12254 12596 50314 50314 SNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETR 38 0 2 Unmodified _SNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETR_ 0 0 1 P13639;Q8TA90;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1067.2598 4 1062.00153 4243.977 58213.99 0.36299 0.0003855 -0.0097635 -1.0369E-05 0.35323 0.00037513 1062.75413049712 1067.50718595822 133.61 0.94492 133.61 133.12 134.06 0 261 39 10 0 0 0 0.013314 2 81187 15.221 15.221 1 2.1798 1.8592 0 6869900 1596300 5273600 32285 1478 12255 12597 50315;50316 50315 SNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETR 38 0 2 Unmodified _SNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETR_ 0 0 1 P13639;Q8TA90;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1067.2559 4 1062.00153 4243.977 58773.91 0.60394 0.00064138 -0.40878 -0.00043413 0.19515 0.00020725 1062.50125463034 1067.50668297227 133.3 1.0622 133.3 132.65 133.71 1.5259E-05 221 44 8 0 0 0 0.035666 2 80043 7.8739 7.8739 1 1.9911 1.8027 0 4847100 1373600 3473600 32286 1478 12255 12597 50317;50318 50318 SNTLPISLQSIR 12 0 1 Unmodified _SNTLPISLQSIR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.8845 2 664.880259 1327.74596 75701.05 0.87407 0.00058115 -0.35198 -0.00023402 0.52209 0.00034713 664.880188933205 669.884135664253 111.97 0.41489 111.97 111.78 112.2 7.6294E-06 114 26 6 0 0 0 0.017123 1 64957 41.704 29.491 1 1.2513 1.0747 0 6373600 2472100 3901500 32287 1207 12256 12598 50319 50319 SNTLPISLQSIR 12 0 1 Unmodified _SNTLPISLQSIR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.8843 2 664.880259 1327.74596 76696.63 0.60999 0.00040557 -0.18472 -0.00012281 0.42527 0.00028275 664.880336333126 669.884155644769 111.8 0.37965 111.8 111.61 111.99 0 103 22 6 0 0 0 0.050203 1 63833 32.606 20.443 1 1.3844 1.1486 0 5433300 2719600 2713700 32288 1207 12256 12598 50320 50320 SNTSLPPLPFK 11 1 0 Unmodified _SNTSLPPLPFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.8362 2 600.834788 1199.65502 NaN NaN NaN 0.11294 6.7857E-05 NaN NaN NaN NaN 99.6 0.97021 99.6 99.025 99.995 0 0 0 0 0.01936 1 60663 53.327 43.933 1 NaN NaN 0 134710000 134710000 0 32289 1569 12257 12599 50321 50321 SNTSLPPLPFK 11 1 0 Unmodified _SNTSLPPLPFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.8365 2 600.834788 1199.65502 NaN NaN NaN 0.51937 0.00031206 NaN NaN NaN NaN 98.744 0.89184 98.744 98.292 99.183 0 0 0 0 0.038868 1 61551 47.559 34.769 1 NaN NaN 0 136020000 136020000 0 32290 1569 12257 12599 50322 50322 SNTSLPPLPFK 11 1 0 Unmodified _SNTSLPPLPFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 600.8371 2 600.834788 1199.65502 77722.03 0.87376 0.00052498 -0.010353 -6.2203E-06 0.8634 0.00051876 600.835274075916 604.841566755262 112.37 1.3123 112.37 111.92 113.24 0 363 68 8 0 0 0 0.0080807 2 65282 51.445 51.445 1 3.2113 2.7784 0 115400000 23221000 92183000 32291 1569 12257 12599 50323;50324 50324 SNTSLPPLPFK 11 1 0 Unmodified _SNTSLPPLPFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.8423 2 600.834788 1199.65502 NaN NaN NaN 0.25731 0.0001546 NaN NaN NaN NaN 112.21 1.5116 112.21 111.75 113.26 0 0 0 0 0.026325 1 64123 51.268 51.268 1 NaN NaN 0 99744000 0 99744000 32292 1569 12257 12599 50325 50325 SNTVVIMNMQGQIVR 15 0 1 2 Oxidation (M) _SNTVVIM(ox)NM(ox)QGQIVR_ SNTVVIM(1)NM(1)QGQIVR SNTVVIM(49)NM(49)QGQIVR 0 2 0 A0MNN4;Q2TAY7 A0MNN4 A0MNN4 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.4412 2 861.437289 1720.86002 NaN NaN NaN -0.1346 -0.00011595 NaN NaN NaN NaN 55.387 0.084015 55.387 55.333 55.417 -3.8147E-06 0 0 0 0.002339 1 31724 48.998 38.946 1 NaN NaN 0 2825400 0 2825400 32293 642 12258 12600 50326 50326 500;501 SNVESALSHGLK 12 1 0 Unmodified _SNVESALSHGLK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.3349 2 621.327859 1240.64116 NaN NaN NaN -0.62386 -0.00038762 NaN NaN NaN NaN 43.64 0.43758 43.64 43.505 43.943 0 0 0 0 5.9217E-20 1 23761 135.99 107.29 1 NaN NaN 0 27106000 0 27106000 32294 104 12259 12601 50327 50327 SNVESALSHGLK 12 1 0 Unmodified _SNVESALSHGLK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.3359 2 621.327859 1240.64116 76439.8 0.34679 0.00021547 -0.17475 -0.00010858 0.17205 0.0001069 621.328356028759 625.33488014962 52.439 0.67627 52.439 52.149 52.825 0 202 53 6 0 0 0 0.0099857 1 25844 46.73 46.73 1 1.357 1.0703 0 5920500 2387200 3533300 32295 104 12259 12601 50328 50328 SNVESALSHGLK 12 1 0 Unmodified _SNVESALSHGLK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.3354 2 621.327859 1240.64116 NaN NaN NaN -0.1175 -7.3007E-05 NaN NaN NaN NaN 52.527 0.61371 52.527 52.283 52.897 -3.8147E-06 0 0 0 0.0091751 1 25319 55.353 41.999 1 NaN NaN 0 2583500 0 2583500 32296 104 12259 12601 50329 50329 SNVIDSMLFVFGYR 14 0 1 Oxidation (M) _SNVIDSM(ox)LFVFGYR_ SNVIDSM(1)LFVFGYR SNVIDSM(91.85)LFVFGYR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.4157 2 832.411066 1662.80758 NaN NaN NaN 0.66932 0.00055715 NaN NaN NaN NaN 119.23 0.84243 119.23 118.86 119.7 0 0 0 0 1.107E-05 1 78399 91.855 77.164 1 NaN NaN 0 31317000 0 31317000 32297 2070;1136 12260 12602 50330 50330 850 SNVIDSMLFVFGYR 14 0 1 Oxidation (M) _SNVIDSM(ox)LFVFGYR_ SNVIDSM(1)LFVFGYR SNVIDSM(68.07)LFVFGYR 0 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.4108 2 832.411066 1662.80758 NaN NaN NaN 0.089443 7.4453E-05 NaN NaN NaN NaN 131.79 0.86757 131.79 131.36 132.23 0 0 0 0 0.00056014 1 78923 68.069 61.215 1 NaN NaN 0 3814600 3814600 0 32298 2070;1136 12260 12602 50331 50331 850 SNVLNVNNHITQYVK 15 1 0 Unmodified _SNVLNVNNHITQYVK_ 0 0 0 B2R6H3;Q8NI77;Q4G194 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3155 3 581.64432 1741.91113 82144.26 0.68819 0.00040028 -0.18663 -0.00010855 0.50156 0.00029173 581.64437193714 584.315652348359 70.825 0.42367 70.825 70.564 70.988 -7.6294E-06 112 33 5 0 0 0 0.033573 1 42326 19.819 13.091 1 1.0886 1.0878 0 15229000 7772400 7457100 32299 842 12261 12603 50332 50332 SNVLNVNNHITQYVK 15 1 0 Unmodified _SNVLNVNNHITQYVK_ 0 0 0 B2R6H3;Q8NI77;Q4G194 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.3161 3 581.64432 1741.91113 79200.98 0.43405 0.00025247 0.69456 0.00040398 1.1286 0.00065645 581.644439940245 584.315900861306 83.089 0.34754 83.089 82.861 83.209 0 64 19 6 0 0 0 0.048914 1 45269 16.685 16.685 1 1.5681 1.2705 0 2740100 1624200 1115900 32300 842 12261 12603 50333 50333 SNVLTGLQDSSTDNR 15 0 1 Unmodified _SNVLTGLQDSSTDNR_ 0 0 0 A0A0S2Z4Q9;A0A0S2Z5B2;O00257 A0A0S2Z4Q9 A0A0S2Z4Q9 CBX4 E3 SUMO-protein ligase CBX4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.888 2 803.886997 1605.75944 NaN NaN NaN -0.37911 -0.00030476 NaN NaN NaN NaN 58.058 0.11487 58.058 57.99 58.105 0 0 0 0 0.0033793 2 33681 60.49 52.844 1 NaN NaN 0 3668700 0 3668700 32301 566 12262 12604 50334;50335 50334 SNVSSPATPTASSSSSTTPTRK 22 1 1 Unmodified _SNVSSPATPTASSSSSTTPTRK_ 0 0 1 H7BZY0;B3KVT9;B7Z3E7;A6NNK5;Q12888 H7BZY0 H7BZY0 TP53BP1 Tumor suppressor p53-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.0323 3 717.688983 2150.04512 NaN NaN NaN 0.65182 0.00046781 NaN NaN NaN NaN 22.225 0.18911 22.225 22.074 22.263 1.9073E-06 0 0 0 0.015985 1 8330 27.61 18.678 1 NaN NaN 0 1343800 0 1343800 32302 689 12263 12605 50336 50336 SNVSSPATPTASSSSSTTPTRK 22 1 1 Unmodified _SNVSSPATPTASSSSSTTPTRK_ 0 0 1 H7BZY0;B3KVT9;B7Z3E7;A6NNK5;Q12888 H7BZY0 H7BZY0 TP53BP1 Tumor suppressor p53-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.697 3 717.688983 2150.04512 NaN NaN NaN -0.36102 -0.0002591 NaN NaN NaN NaN 21.963 0.14598 21.963 21.915 22.061 0 0 0 0 0.0027777 1 8083 34.689 25.757 1 NaN NaN 0 4112000 0 4112000 32303 689 12263 12605 50337 50337 SNVSSPATPTASSSSSTTPTRK 22 1 1 Unmodified _SNVSSPATPTASSSSSTTPTRK_ 0 0 1 H7BZY0;B3KVT9;B7Z3E7;A6NNK5;Q12888 H7BZY0 H7BZY0 TP53BP1 Tumor suppressor p53-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.6972 3 717.688983 2150.04512 72578.02 0.68418 0.00049103 0.069936 5.0192E-05 0.75411 0.00054122 718.023380684914 723.696298698919 25.085 0.24388 25.085 24.966 25.21 0 40 13 4 0 0 0 0.025043 1 8534 15.316 12.35 1 0.90856 0.7698 0 1065000 462230 602800 32304 689 12263 12605 50338 50338 SNYFLK 6 1 0 Unmodified _SNYFLK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;Q53HK9;F8VW21;G3V210;F8VZS0;B4E3D5;Q8NHW5;F8VQY6;F8VRK7;F8VS58;F8VYN4 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 386.2054 2 386.205421 770.39629 97020.26 -0.068003 -2.6263E-05 0.115 4.4413E-05 0.046994 1.8149E-05 386.205349504813 390.212440973705 52.671 1.1458 52.671 52.182 53.328 0 380 89 6 0 0 0 0.058999 1 25439 69.39 10.729 1 0.92422 0.76036 0 10216000 4996500 5219700 32305 345 12264 12606 50339 50339 SNYNFEK 7 1 0 Unmodified _SNYNFEK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.206 2 451.20615 900.397747 NaN NaN NaN 0.44625 0.00020135 NaN NaN NaN NaN 25.551 0.42074 25.551 25.372 25.793 0 0 0 0 0.027791 1 11072 89.55 72.623 1 NaN NaN 0 42836000 42836000 0 32306 1082 12265 12607 50340 50340 SNYNLPMHK 9 1 0 Oxidation (M) _SNYNLPM(ox)HK_ SNYNLPM(1)HK SNYNLPM(117.4)HK 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.2664 2 560.266216 1118.51788 78436.53 0.70773 0.00039652 -0.38315 -0.00021467 0.32458 0.00018185 560.266071447098 564.27318071362 21.552 0.44638 21.552 21.258 21.704 -1.9073E-06 151 23 10 0 0 0 1.0155E-05 1 7715 117.4 112.41 1 1.3058 1.506 0 216730000 91902000 124830000 32307 1548 12266 12608 50341 50341 1306 SNYNLPMHK 9 1 0 Oxidation (M) _SNYNLPM(ox)HK_ SNYNLPM(1)HK SNYNLPM(151.04)HK 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.2733 2 560.266216 1118.51788 78436.54 0.45828 0.00025676 -0.20986 -0.00011758 0.24842 0.00013918 560.266217163113 564.273258360371 21.775 0.60383 21.775 21.659 22.263 0 176 35 10 0 0 0 7.5052E-12 1 7947 151.04 144.4 1 1.2806 1.5061 0 315970000 139090000 176880000 32308 1548 12266 12608 50342 50342 1306 SNYNLPMHK 9 1 0 Oxidation (M) _SNYNLPM(ox)HK_ SNYNLPM(1)HK SNYNLPM(143.73)HK 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.2738 2 560.266216 1118.51788 77637.41 0.50093 0.00028066 -0.17329 -9.7088E-05 0.32764 0.00018357 560.26614801953 564.273236467708 21.352 0.38838 21.352 21.127 21.516 0 94 14 10 0 0 0 3.0032E-08 1 7425 143.73 134.97 1 1.2857 1.501 0 272230000 118730000 153500000 32309 1548 12266 12608 50343 50343 1306 SNYNLPMHK 9 1 0 Oxidation (M) _SNYNLPM(ox)HK_ SNYNLPM(1)HK SNYNLPM(40.5)HK 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.2663 2 560.266216 1118.51788 79225.66 0.48768 0.00027323 0.059364 3.3259E-05 0.54704 0.00030649 560.26622799147 564.273436973925 23.913 0.43741 23.913 23.699 24.136 0 140 24 9 0 0 0 0.021235 1 8335 40.502 38.104 1 0.73423 0.56942 0 13935000 7976500 5958600 32310 1548 12266 12608 50344 50344 1306 SNYNLPMHK 9 1 0 Oxidation (M) _SNYNLPM(ox)HK_ SNYNLPM(1)HK SNYNLPM(69.81)HK 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DMJ2 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.2663 2 560.266216 1118.51788 77284.22 0.42157 0.00023619 -0.030119 -1.6874E-05 0.39146 0.00021932 560.266146974712 564.273297112336 23.493 0.50099 23.493 23.179 23.68 0 140 24 9 0 0 0 0.0020448 2 7435 69.812 69.812 1 0.74089 0.59578 0 13872000 7889000 5983100 32311 1548 12266 12608 50345;50346 50346 1306 SNYQGLPVR 9 0 1 Unmodified _SNYQGLPVR_ 0 0 0 A0A024R704;P78362 A0A024R704 A0A024R704 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.274 2 517.274898 1032.53524 83813.34 0.80193 0.00041482 0.54967 0.00028433 1.3516 0.00069915 517.275639201228 522.279178686648 43.989 0.34877 43.989 43.802 44.151 0 94 30 4 0 0 0 0.0044628 1 24007 69.198 58.73 1 1.382 1.384 0 18816000 6935300 11881000 32312 212 12267 12609 50347 50347 SPAESCDLLGDIQTCIR 17 0 1 Unmodified _SPAESCDLLGDIQTCIR_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 972.9564 2 967.950957 1933.88736 61866.94 0.22004 0.00021299 0.055861 5.4071E-05 0.27591 0.00026706 968.452689453744 972.955699409 106.88 0.47048 106.88 106.62 107.09 0 203 35 8 0 0 0 6.9834E-18 2 66442 127.71 125.01 1 0.79943 0.81813 0 19058000 9948000 9109600 32313 1997 12268 12610 50348;50349 50349 SPAESCDLLGDIQTCIR 17 0 1 Unmodified _SPAESCDLLGDIQTCIR_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 968.4527 2 967.950957 1933.88736 62650.99 0.60399 0.00058463 -0.23818 -0.00023054 0.36582 0.00035409 967.950901883195 972.955543080037 106.31 0.45332 106.31 106.08 106.53 0 184 33 8 0 0 0 4.5239E-14 2 67591 125.03 119.43 1 0.80244 0.8254 0 21283000 13447000 7836300 32314 1997 12268 12610 50350;50351 50350 SPAESCDLLGDIQTCIR 17 0 1 Unmodified _SPAESCDLLGDIQTCIR_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 973.4562 2 967.950957 1933.88736 61066.41 0.19173 0.00018558 -0.21995 -0.0002129 -0.02822 -2.7316E-05 967.951175206566 972.955152128866 118.41 0.45908 118.41 118.16 118.62 -7.6294E-06 142 18 10 0 0 0 3.816E-09 2 69848 105.95 100.67 1 0.93916 0.78346 0 23076000 12002000 11074000 32315 1997 12268 12610 50352;50353 50352 SPAESCDLLGDIQTCIR 17 0 1 Unmodified _SPAESCDLLGDIQTCIR_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 968.4519 2 967.950957 1933.88736 60870.58 0.12494 0.00012093 -0.41242 -0.0003992 -0.28749 -0.00027827 967.951315219649 972.954934545686 118.22 0.44589 118.22 118 118.45 -7.6294E-06 142 19 10 0 0 0 4.8836E-25 2 68823 140.08 134.8 1 1.0451 0.89566 0 20971000 10193000 10778000 32316 1997 12268 12610 50354;50355 50355 SPAFVQLAPLSSK 13 1 0 Unmodified _SPAFVQLAPLSSK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.8869 2 672.879727 1343.7449 NaN NaN NaN -0.18078 -0.00012165 NaN NaN NaN NaN 98.019 0.52212 98.019 97.85 98.372 0 0 0 0 0.0050357 1 59848 59.198 50.666 1 NaN NaN 0 9360600 0 9360600 32317 680 12269 12611 50356 50356 SPAFVQLAPLSSK 13 1 0 Unmodified _SPAFVQLAPLSSK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.8871 2 672.879727 1343.7449 78191.37 0.80739 0.00054327 -0.45864 -0.00030861 0.34875 0.00023466 672.878868789647 676.886792740197 110.87 0.42032 110.87 110.66 111.08 7.6294E-06 65 17 6 0 0 0 0.058639 1 64141 27.378 27.378 1 1.9404 1.6312 0 2152400 773720 1378700 32318 680 12269 12611 50357 50357 SPAFVQLAPLSSK 13 1 0 Unmodified _SPAFVQLAPLSSK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.8804 2 672.879727 1343.7449 75483.63 0.71621 0.00048192 -0.061613 -4.1458E-05 0.6546 0.00044047 672.87965910601 676.88683517137 110.65 0.39394 110.65 110.47 110.86 -7.6294E-06 62 19 5 0 0 0 0.022108 1 63081 41.689 41.689 1 1.6801 1.3066 0 2183800 1004900 1178900 32319 680 12269 12611 50358 50358 SPAGLQVLNDYLADK 15 1 0 Unmodified _SPAGLQVLNDYLADK_ 0 0 0 A0A024R3W7;P24534;F8WF65;F2Z2G2;C9JZW3 A0A024R3W7 A0A024R3W7 EEF1B2 Elongation factor 1-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.4291 2 802.419945 1602.82534 NaN NaN NaN 0.048209 3.8684E-05 NaN NaN NaN NaN 111 0.57611 111 110.77 111.35 0 0 0 0 3.8693E-33 1 69731 155.66 122.43 1 NaN NaN 0 16400000 0 16400000 32320 142 12270 12612 50359 50359 SPAGLQVLNDYLADK 15 1 0 Unmodified _SPAGLQVLNDYLADK_ 0 0 0 A0A024R3W7;P24534;F8WF65;F2Z2G2;C9JZW3 A0A024R3W7 A0A024R3W7 EEF1B2 Elongation factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 806.929 2 802.419945 1602.82534 69439.78 0.87244 0.00070006 0.17237 0.00013831 1.0448 0.00083837 802.921679300048 806.426985848388 122.6 0.42654 122.6 122.4 122.83 0 78 20 5 0 0 0 0.00035576 1 73163 59.248 51.985 1 1.0177 0.80272 0 5455400 2503800 2951600 32321 142 12270 12612 50360 50360 SPAGLQVLNDYLADK 15 1 0 Unmodified _SPAGLQVLNDYLADK_ 0 0 0 A0A024R3W7;P24534;F8WF65;F2Z2G2;C9JZW3 A0A024R3W7 A0A024R3W7 EEF1B2 Elongation factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 802.4208 2 802.419945 1602.82534 69600.47 0.8573 0.00068791 0.42972 0.00034481 1.287 0.0010327 802.419866592266 806.92893401294 122.39 0.46266 122.39 122.22 122.68 0 65 21 4 0 0 0 1.4633E-05 1 72204 89.507 75.272 1 1.1333 0.92426 0 5801000 2470900 3330100 32322 142 12270 12612 50361 50361 SPAGPAATPAQAQAASTPR 19 0 1 Unmodified _SPAGPAATPAQAQAASTPR_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 880.4507 2 875.447557 1748.88056 65174.73 0.75707 0.00066278 -0.18232 -0.00015961 0.57475 0.00050316 875.948856491119 880.451529903611 35.554 0.38666 35.554 35.324 35.711 0 116 34 6 0 0 0 1.5034E-16 3 17825 113.76 113.76 1 0.76407 0.79971 0 12768000 6706200 6062000 32323 1712;1225 12271 12613 50362;50363;50364 50363 SPAGPAATPAQAQAASTPR 19 0 1 Unmodified _SPAGPAATPAQAQAASTPR_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.4525 2 875.447557 1748.88056 64494.61 0.7516 0.00065799 0.098292 8.6049E-05 0.84989 0.00074404 875.949247521748 880.4520969025 34.741 0.29988 34.741 34.599 34.899 0 100 25 6 0 0 0 5.5641E-30 2 17565 138.19 138.19 1 0.78793 0.78742 0 16886000 10035000 6850900 32324 1712;1225 12271 12613 50365;50366 50365 SPAGPAATPAQAQAASTPR 19 0 1 Unmodified _SPAGPAATPAQAQAASTPR_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 880.9536 2 875.447557 1748.88056 65374.53 -0.017124 -1.4991E-05 0.44088 0.00038597 0.42376 0.00037098 875.447883705872 880.452306818817 41.382 0.50382 41.382 41.165 41.669 3.8147E-06 167 38 6 0 0 0 0.00025466 1 18658 45.115 45.115 1 1.1545 0.99782 0 2714900 1034000 1680900 32325 1712;1225 12271 12613 50367 50367 SPASDTYIVFGEAK 14 1 0 Unmodified _SPASDTYIVFGEAK_ 0 0 0 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;A0A024RB41;Q13765;E9PAV3;B4DDI8 F8W1N5 F8W1N5 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.8713 2 742.867014 1483.71947 71426.79 0.879 0.00065298 -0.045795 -3.402E-05 0.8332 0.00061896 742.866989510719 746.87374691597 85.507 0.65413 85.507 85.277 85.931 0 212 53 6 0 0 0 9.6915E-12 2 51344 158.06 123.34 1 2.4 2.3635 0 24223000 5096500 19126000 32326 324 12272 12614 50368;50369 50368 SPASDTYIVFGEAK 14 1 0 Unmodified _SPASDTYIVFGEAK_ 0 0 0 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;A0A024RB41;Q13765;E9PAV3;B4DDI8 F8W1N5 F8W1N5 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.8743 2 742.867014 1483.71947 71974.24 0.60061 0.00044617 -0.11433 -8.4929E-05 0.48628 0.00036124 743.368473294104 746.873477452475 84.62 0.64173 84.62 84.282 84.923 0 192 53 6 0 0 0 4.2686E-10 4 52069 151.26 127.17 1 2.2126 2.4169 0 40331000 14581000 25750000 32327 324 12272 12614 50370;50371;50372;50373 50371 SPASDTYIVFGEAK 14 1 0 Unmodified _SPASDTYIVFGEAK_ 0 0 0 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;A0A024RB41;Q13765;E9PAV3;B4DDI8 F8W1N5 F8W1N5 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.8677 2 742.867014 1483.71947 71605.19 0.79108 0.00058767 0.016437 1.221E-05 0.80752 0.00059988 742.86699421513 746.873981328509 97.794 0.57678 97.794 97.614 98.191 7.6294E-06 171 40 7 0 0 0 0.00022654 3 55148 65.563 50.023 1 1.4754 1.1699 0 4370100 1638400 2731700 32328 324 12272 12614 50374;50375;50376 50376 SPASDTYIVFGEAK 14 1 0 Unmodified _SPASDTYIVFGEAK_ 0 0 0 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;A0A024RB41;Q13765;E9PAV3;B4DDI8 F8W1N5 F8W1N5 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 743.3683 2 742.867014 1483.71947 72475.7 0.57758 0.00042907 0.5048 0.000375 1.0824 0.00080407 742.867004293184 746.874419650852 97.654 0.64828 97.654 97.466 98.114 0 156 38 6 0 0 0 0.00023171 2 54131 69.815 53.183 1 1.3673 1.0704 0 3360800 1145900 2214900 32329 324 12272 12614 50377;50378 50377 SPASIEVVKPMEAASAILSQADAR 24 1 1 Oxidation (M) _SPASIEVVKPM(ox)EAASAILSQADAR_ SPASIEVVKPM(1)EAASAILSQADAR SPASIEVVKPM(121.47)EAASAILSQADAR 0 1 1 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.0946 3 819.759973 2456.25809 67150.05 0.78415 0.00064281 0.036371 2.9816E-05 0.82052 0.00067263 820.42873383416 826.101726467909 103.59 0.70229 103.59 103.37 104.07 0 289 57 7 0 0 0 5.1411E-28 2 63874 121.47 114.91 1 1.1469 1.3018 0 24049000 9307000 14742000 32330 125 12273 12615 50379;50380 50379 111 SPASIEVVKPMEAASAILSQADAR 24 1 1 Oxidation (M) _SPASIEVVKPM(ox)EAASAILSQADAR_ SPASIEVVKPM(1)EAASAILSQADAR SPASIEVVKPM(126.97)EAASAILSQADAR 0 1 1 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.1016 3 819.759973 2456.25809 66316.06 0.73492 0.00060246 -0.2477 -0.00020305 0.48722 0.0003994 820.094619126665 826.101548868788 104.92 0.75091 104.92 104.56 105.31 7.6294E-06 410 61 11 0 0 0 5.7738E-36 3 64775 126.97 109.38 1 1.2203 1.4359 0 33839000 14831000 19008000 32331 125 12273 12615 50381;50382;50383 50381 111 SPASIEVVKPMEAASAILSQADAR 24 1 1 Oxidation (M) _SPASIEVVKPM(ox)EAASAILSQADAR_ SPASIEVVKPM(1)EAASAILSQADAR SPASIEVVKPM(96.71)EAASAILSQADAR 0 1 1 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.0959 3 819.759973 2456.25809 67289.05 1.0028 0.00082204 -0.20719 -0.00016984 0.79559 0.00065219 820.09442358863 826.101653835269 102.79 0.6702 102.79 102.49 103.16 -7.6294E-06 353 53 9 0 0 0 1.2301E-16 2 64893 96.708 96.708 1 1.1913 1.3997 0 62290000 26796000 35493000 32332 125 12273 12615 50384;50385 50384 111 SPASIEVVKPMEAASAILSQADAR 24 1 1 Oxidation (M) _SPASIEVVKPM(ox)EAASAILSQADAR_ SPASIEVVKPM(1)EAASAILSQADAR SPASIEVVKPM(156.74)EAASAILSQADAR 0 1 1 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.1024 3 819.759973 2456.25809 66300.14 0.73736 0.00060446 -1.0106 -0.00082849 -0.27328 -0.00022403 820.094270626442 826.101635918417 104.03 0.70084 104.03 103.73 104.43 0 385 58 9 0 0 0 3.8338E-56 3 65895 156.74 143.01 1 1.1784 1.3604 0 30266000 14129000 16137000 32333 125 12273 12615 50386;50387;50388 50386 111 SPASIEVVKPMEAASAILSQADAR 24 1 1 Oxidation (M) _SPASIEVVKPM(ox)EAASAILSQADAR_ SPASIEVVKPM(1)EAASAILSQADAR SPASIEVVKPM(86.08)EAASAILSQADAR 0 1 1 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.0953 3 819.759973 2456.25809 65715 0.98144 0.00080455 -0.41476 -0.00034001 0.56668 0.00046454 820.094142311319 825.76731336675 116.04 0.40524 116.04 115.85 116.25 0 96 16 8 0 0 0 4.5809E-14 2 68103 86.08 79.52 1 0.91647 0.78322 0 10077000 4384800 5692600 32334 125 12273 12615 50389;50390 50389 111 SPASIEVVKPMEAASAILSQADAR 24 1 1 Oxidation (M) _SPASIEVVKPM(ox)EAASAILSQADAR_ SPASIEVVKPM(1)EAASAILSQADAR SPASIEVVKPM(88.5)EAASAILSQADAR 0 1 1 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 826.1022 3 819.759973 2456.25809 66201.41 0.98292 0.00080576 -0.45532 -0.00037325 0.5276 0.00043251 820.094227087067 826.101693130368 115.89 0.5093 115.89 115.6 116.1 0 143 24 11 0 0 0 4.2432E-16 2 67042 88.504 88.504 1 0.74185 0.62782 0 11920000 6013500 5906200 32335 125 12273 12615 50391;50392 50391 111 SPASIEVVKPMEAASAILSQADAR 24 1 1 Unmodified _SPASIEVVKPMEAASAILSQADAR_ 0 0 1 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 814.764 3 814.428334 2440.26317 66802.16 0.76681 0.00062451 -0.27564 -0.00022449 0.49117 0.00040002 814.762755897458 820.434235459505 129.78 0.46349 129.78 129.58 130.04 0 127 20 11 0 0 0 5.7806E-13 2 78589 78.098 78.098 1 1.2246 1.0336 0 7768600 3531800 4236800 32336 125 12273 12616 50393;50394 50394 SPASIEVVKPMEAASAILSQADAR 24 1 1 Unmodified _SPASIEVVKPMEAASAILSQADAR_ 0 0 1 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.7711 3 814.428334 2440.26317 67250.34 1.0674 0.00086933 0.1641 0.00013364 1.2315 0.001003 814.763328066811 820.770451951899 129.59 0.68903 129.59 129.36 130.05 0 115 26 10 0 0 0 7.9266E-12 3 77580 65.428 63.906 1 1.4693 1.2381 0 8245300 2838300 5407000 32337 125 12273 12616 50395;50396;50397 50396 SPAVATSTAAPPPPSSPLPSK 21 1 0 Unmodified _SPAVATSTAAPPPPSSPLPSK_ 0 0 0 B4DZJ6;B4DYY5;F8W726;Q14157 B4DZJ6 B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.0295 2 980.52293 1959.03131 NaN NaN NaN 0.38911 0.00038153 NaN NaN NaN NaN 69.584 0.22281 69.584 69.465 69.688 -7.6294E-06 0 0 0 0.018552 1 40383 32.275 25.394 1 NaN NaN 0 2467800 0 2467800 32338 1052 12274 12617 50398 50398 SPDEATAADQESEDDLSASR 20 0 1 Unmodified _SPDEATAADQESEDDLSASR_ 0 0 0 C9JME2;Q9Y4F1;M0QXT1 C9JME2 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1052.4451 2 1047.44072 2092.86688 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.106 1 41.106 40.606 41.606 0 0 0 0 0.031368 1 21600 37.013 31.628 1 32339 1139 12275 12618 50399 50399 SPDGAHLTWEPPSVTSGK 18 1 0 Unmodified _SPDGAHLTWEPPSVTSGK_ 0 0 0 A6NEM2;P51610;H7C1C4 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.9742 3 622.639124 1864.89554 NaN NaN NaN 0.10018 6.2374E-05 NaN NaN NaN NaN 74.617 0.35104 74.617 74.412 74.763 0 0 0 0 0.035089 1 43799 25.198 21.419 1 NaN NaN 0 5543700 5543700 0 32340 680 12276 12619 50400 50400 SPDSDVAATLK 11 1 0 Unmodified _SPDSDVAATLK_ 0 0 0 Q8N5A0;A0A087WUT6;O60841;B3KM86;D3DVI5 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.7848 2 552.282586 1102.55062 NaN NaN NaN 0.13786 7.6135E-05 NaN NaN NaN NaN 41.874 0.87654 41.874 41.697 42.573 3.8147E-06 0 0 0 0.032341 1 22899 49.489 25.334 1 NaN NaN 0 29790000 29790000 0 32341 414 12277 12620 50401 50401 SPDSDVAATLK 11 1 0 Unmodified _SPDSDVAATLK_ 0 0 0 Q8N5A0;A0A087WUT6;O60841;B3KM86;D3DVI5 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.2891 2 552.282586 1102.55062 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.395 1 42.395 41.895 42.895 0 0 0 0 6.0444E-13 1 22854 123.63 88.818 1 32342 414 12277 12620 50402 50402 SPDTILQK 8 1 0 Unmodified _SPDTILQK_ 0 0 0 Q6IBR8;B5BU01;P20042;Q96I16 Q6IBR8 Q6IBR8 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2601 2 451.2531 900.491647 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.59 1 33.59 33.09 34.09 0 0 0 0 0.052443 1 16737 53.878 7.9962 1 32343 1073 12278 12621 50403 50403 SPEDHIGAVLER 12 0 1 Unmodified _SPEDHIGAVLER_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.5615 3 441.561486 1321.66263 90755.55 0.24158 0.00010667 0.23383 0.00010325 0.47541 0.00020992 441.561548722727 444.897687815878 52.635 0.63322 52.635 52.303 52.936 0 247 50 7 0 0 0 0.03264 1 29948 23.956 23.956 1 0.98516 1.1411 0 66819000 31944000 34875000 32344 1721 12279 12622 50404 50404 SPEEHLEEMMK 11 1 0 2 Oxidation (M) _SPEEHLEEM(ox)M(ox)K_ SPEEHLEEM(1)M(1)K SPEEHLEEM(47.19)M(47.19)K 0 2 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.3011 2 696.29451 1390.57447 NaN NaN NaN -1.3118 -0.00091337 NaN NaN NaN NaN 18.491 0.18026 18.491 18.417 18.598 0 0 0 0 0.0075973 1 5460 47.187 42.888 1 NaN NaN 0 10036000 0 10036000 32345 2103 12280 12623 50405 50405 1932;1933 SPEEHLEEMMK 11 1 0 2 Oxidation (M) _SPEEHLEEM(ox)M(ox)K_ SPEEHLEEM(1)M(1)K SPEEHLEEM(72.64)M(72.64)K 0 2 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.3002 2 696.29451 1390.57447 NaN NaN NaN -0.73337 -0.00051064 NaN NaN NaN NaN 18.438 0.34777 18.438 18.285 18.633 0 0 0 0 0.00049999 1 5176 72.643 68.489 1 NaN NaN 0 4518700 0 4518700 32346 2103 12280 12623 50406 50406 1932;1933 SPEQQLSATQK 11 1 0 Unmodified _SPEQQLSATQK_ 0 0 0 Q5BKZ2;P52294;C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4 Q5BKZ2 Q5BKZ2 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8187 2 608.812042 1215.60953 77152.73 0.18021 0.00010972 0.3729 0.00022703 0.55311 0.00033674 608.812309496234 612.819359267033 22.084 0.32742 22.084 21.89 22.217 0 48 14 5 0 0 0 7.0369E-24 1 8114 174.98 174.98 1 0.94772 0.94913 0 15690000 7656300 8033500 32347 1600 12281 12624 50407 50407 SPEQQLSATQK 11 1 0 Unmodified _SPEQQLSATQK_ 0 0 0 Q5BKZ2;P52294;C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4 Q5BKZ2 Q5BKZ2 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.8191 2 608.812042 1215.60953 NaN NaN NaN 0.86816 0.00052855 NaN NaN NaN NaN 24.44 0.40532 24.44 24.17 24.575 0 0 0 0 0.015491 1 8593 54.471 31.042 1 NaN NaN 0 955450 0 955450 32348 1600 12281 12624 50408 50408 SPEVLLGSAR 10 0 1 Unmodified _SPEVLLGSAR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.7943 2 514.790381 1027.56621 84973.08 0.44531 0.00022924 0.82018 0.00042222 1.2655 0.00065146 514.790348838344 519.794377494378 56.773 0.85316 56.773 56.423 57.276 0 480 71 10 0 0 0 0.00035408 2 31847 89.029 56.243 1 1.2235 1.3795 0 98999000 44280000 54719000 32349 25 12282 12625 50409;50410 50410 SPEVLLGSAR 10 0 1 Unmodified _SPEVLLGSAR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7939 2 514.790381 1027.56621 83602.91 0.27324 0.00014066 0.2067 0.00010641 0.47994 0.00024707 514.790498550606 519.794446615458 55.673 1.1057 55.673 55.167 56.273 0 356 85 7 0 0 0 1.195E-08 2 31796 123.5 83.554 1 1.2229 1.3921 0 128910000 61321000 67592000 32350 25 12282 12625 50411;50412 50412 SPEVLLGSAR 10 0 1 Unmodified _SPEVLLGSAR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.7908 2 514.790381 1027.56621 NaN NaN NaN 0.64222 0.00033061 NaN NaN NaN NaN 64.974 0.82432 64.974 64.61 65.434 -7.6294E-06 0 0 0 0.0050896 1 33548 70.1 26.854 1 NaN NaN 0 4256600 4256600 0 32351 25 12282 12625 50413 50413 SPEVLLGSAR 10 0 1 Unmodified _SPEVLLGSAR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 519.7946 2 514.790381 1027.56621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.016 1 65.016 64.516 65.516 -7.6294E-06 0 0 0 2.291E-05 1 33566 93.111 59.314 1 32352 25 12282 12625 50414 50414 SPEVLLGSAR 10 0 1 Unmodified _SPEVLLGSAR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.7905 2 514.790381 1027.56621 NaN NaN NaN 0.69516 0.00035786 NaN NaN NaN NaN 65.289 0.71489 65.289 65.025 65.74 0 0 0 0 0.016683 1 32867 56.432 21.624 1 NaN NaN 0 3654100 3654100 0 32353 25 12282 12625 50415 50415 SPEVLLGSAR 10 0 1 Unmodified _SPEVLLGSAR_ 0 0 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.7943 2 514.790381 1027.56621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.571 1 65.571 65.071 66.071 0 0 0 0 0.024194 1 33150 52.49 29.061 1 32354 25 12282 12625 50416 50416 SPFEVQVGPEAGMQK 15 1 0 Oxidation (M) _SPFEVQVGPEAGM(ox)QK_ SPFEVQVGPEAGM(1)QK SPFEVQVGPEAGM(56.23)QK 0 1 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.3909 2 810.39033 1618.76611 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.9 1 70.9 70.4 71.4 0 0 0 0 0.0010403 1 42409 56.225 38.361 1 32355 1402 12283 12626 50417 50417 1080 SPFEVQVGPEAGMQK 15 1 0 Oxidation (M) _SPFEVQVGPEAGM(ox)QK_ SPFEVQVGPEAGM(1)QK SPFEVQVGPEAGM(57.16)QK 0 1 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.3907 2 810.39033 1618.76611 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.946 1 70.946 70.446 71.446 0 0 0 0 0.00063854 1 42443 57.164 45.845 1 32356 1402 12283 12626 50418 50418 1080 SPFEVYVDK 9 1 0 Unmodified _SPFEVYVDK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.2791 2 542.27149 1082.52843 83832.48 0.72092 0.00039094 0.011606 6.2936E-06 0.73253 0.00039723 542.270837868756 546.278662789998 72.007 0.57473 72.007 71.776 72.35 0 179 40 6 0 0 0 0.0011072 2 42052 89.886 77.53 1 1.4042 1.3839 0 24547000 8399300 16148000 32357 1504 12284 12627 50419;50420 50420 SPFEVYVDK 9 1 0 Unmodified _SPFEVYVDK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.271 2 542.27149 1082.52843 83345.72 0.63474 0.0003442 0.027788 1.5069E-05 0.66252 0.00035927 542.270906070788 546.278722733329 70.71 0.68648 70.71 70.51 71.197 0 207 51 6 0 0 0 0.00014939 2 42253 108.3 96.236 1 1.4947 1.5163 0 29653000 11157000 18496000 32358 1504 12284 12627 50421;50422 50422 SPFNSPSPQDSPR 13 0 1 Unmodified _SPFNSPSPQDSPR_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.3311 2 708.33113 1414.64771 74786.72 0.8323 0.00058954 -0.12673 -8.9765E-05 0.70557 0.00049978 708.331260400826 713.334781652382 39.277 0.4797 39.277 38.981 39.461 0 83 33 4 0 0 0 5.7313E-06 2 20329 105.46 86.68 1 0.76384 0.76615 0 9118500 5361200 3757400 32359 1091 12285 12628 50423;50424 50424 SPFNSPSPQDSPR 13 0 1 Unmodified _SPFNSPSPQDSPR_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.3318 2 708.33113 1414.64771 72936.97 0.53152 0.00037649 -0.34049 -0.00024118 0.19103 0.00013531 708.331066555334 713.335301981619 38.288 0.47821 38.288 38.08 38.558 0 102 38 4 0 0 0 2.3956E-05 1 20129 98.898 69.812 1 0.66027 0.65873 0 16679000 8263600 8415400 32360 1091 12285 12628 50425 50425 SPFNSPSPQDSPR 13 0 1 Unmodified _SPFNSPSPQDSPR_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.3315 2 708.33113 1414.64771 72557.51 0.64452 0.00045653 0.27837 0.00019718 0.92289 0.00065371 708.331199726215 713.33559614066 45.063 0.4203 45.063 44.902 45.322 0 138 30 6 0 0 0 0.014205 1 21510 37.426 33.271 1 0.65084 0.56528 0 2225600 1160700 1064900 32361 1091 12285 12628 50426 50426 SPFPDVVPLQPEVSSYR 17 0 1 Unmodified _SPFPDVVPLQPEVSSYR_ 0 0 0 P31276 P31276 P31276 HOXC13 Homeobox protein Hox-C13 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 958.9905 2 958.991266 1915.96798 NaN NaN NaN 0.67154 0.000644 NaN NaN NaN NaN 114.81 0.34253 114.81 114.59 114.94 -7.6294E-06 0 0 0 1.0908E-06 1 74710 83.314 60.594 1 NaN NaN 0 8581100 8581100 0 32362 1534 12286 12629 50427 50427 SPFPDVVPLQPEVSSYR 17 0 1 Unmodified _SPFPDVVPLQPEVSSYR_ 0 0 0 P31276 P31276 P31276 HOXC13 Homeobox protein Hox-C13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 964.4975 2 958.991266 1915.96798 62552.39 0.41775 0.00040062 0.61624 0.00059097 1.034 0.00099159 958.991862623 963.995811074248 126.62 0.58078 126.62 126.36 126.94 0 104 21 8 0 0 0 0.005133 2 76213 34.898 34.898 1 0.7908 0.67954 0 6449800 3660600 2789200 32363 1534 12286 12629 50428;50429 50429 SPFPDVVPLQPEVSSYR 17 0 1 Unmodified _SPFPDVVPLQPEVSSYR_ 0 0 0 P31276 P31276 P31276 HOXC13 Homeobox protein Hox-C13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 964.4955 2 958.991266 1915.96798 63132.52 0.25901 0.00024838 0.83526 0.00080101 1.0943 0.0010494 959.494083793318 963.995543554539 126.5 0.48685 126.5 126.23 126.72 0 103 19 8 0 0 0 0.017459 1 75122 26.969 26.969 1 0.78056 0.6476 0 5327400 3227300 2100000 32364 1534 12286 12629 50430 50430 SPFSVAVSPSLDLSK 15 1 0 Unmodified _SPFSVAVSPSLDLSK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.4133 2 767.411588 1532.80862 NaN NaN NaN -0.2705 -0.00020759 NaN NaN NaN NaN 107.27 0.46636 107.27 107.12 107.59 7.6294E-06 0 0 0 0.014857 1 68674 46.796 30.125 1 NaN NaN 0 19535000 19535000 0 32365 1504 12287 12630 50431 50431 SPFSVAVSPSLDLSK 15 1 0 Unmodified _SPFSVAVSPSLDLSK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.4195 2 767.411588 1532.80862 NaN NaN NaN 0.99365 0.00076254 NaN NaN NaN NaN 119.1 0.68613 119.1 118.88 119.56 0 0 0 0 3.1323E-09 1 70404 105.65 78.863 1 NaN NaN 0 8946800 0 8946800 32366 1504 12287 12630 50432 50432 SPFTVGVAAPLDLSK 15 1 0 Unmodified _SPFTVGVAAPLDLSK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.4236 2 751.416674 1500.81879 NaN NaN NaN -0.37633 -0.00028278 NaN NaN NaN NaN 111.7 0.49353 111.7 111.46 111.95 7.6294E-06 0 0 0 0.010963 1 70330 50.222 35.761 1 NaN NaN 0 7058800 0 7058800 32367 1402 12288 12631 50433 50433 SPFTVGVAAPLDLSK 15 1 0 Unmodified _SPFTVGVAAPLDLSK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.424 2 751.416674 1500.81879 72893.09 0.66379 0.00049878 0.52106 0.00039153 1.1848 0.00089031 751.417244649484 755.423409859124 111.11 0.44077 111.11 110.89 111.33 0 108 32 5 0 0 0 0.00022701 1 71590 74.611 74.611 1 2.3075 2.3326 0 8698800 2197800 6501000 32368 1402 12288 12631 50434 50434 SPGLYFLTAGDQGTLR 16 0 1 Unmodified _SPGLYFLTAGDQGTLR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.4398 2 848.438669 1694.86278 65133.62 0.64082 0.0005437 0.32401 0.0002749 0.96483 0.0008186 848.43862173324 853.442965951563 109.54 0.68459 109.54 109.22 109.91 0 353 51 9 0 0 0 5.4062E-57 2 68528 184.34 184.34 1 0.87227 1.0031 0 143850000 77812000 66036000 32369 1698;436 12289 12632 50435;50436 50436 SPGLYFLTAGDQGTLR 16 0 1 Unmodified _SPGLYFLTAGDQGTLR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.4371 2 848.438669 1694.86278 65273.64 0.90971 0.00077183 -0.029889 -2.5359E-05 0.87982 0.00074647 848.940064740781 853.442792609998 108.97 0.65838 108.97 108.66 109.32 0 313 48 11 0 0 0 1.7701E-08 2 69700 102.62 97.127 1 0.8543 0.97359 0 102140000 58022000 44116000 32370 1698;436 12289 12632 50437;50438 50437 SPGLYFLTAGDQGTLR 16 0 1 Unmodified _SPGLYFLTAGDQGTLR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 853.9454 2 848.438669 1694.86278 65794.45 0.67374 0.00057163 0.076576 6.497E-05 0.75032 0.0006366 848.438418076597 853.442827236377 120.55 0.87428 120.55 120.13 121.01 0 238 40 9 0 0 0 1.3219E-08 2 71508 105.17 105.17 1 1.2319 1.0607 0 57394000 26118000 31276000 32371 1698;436 12289 12632 50439;50440 50439 SPGLYFLTAGDQGTLR 16 0 1 Unmodified _SPGLYFLTAGDQGTLR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2;A0JLS5 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.9405 2 848.438669 1694.86278 65264 0.85929 0.00072906 -0.10862 -9.2154E-05 0.75068 0.0006369 848.438533137416 853.442635445573 120.38 0.72794 120.38 120.08 120.8 0 295 38 10 0 0 0 7.1986E-09 2 70478 108.59 108.59 1 1.1316 0.98726 0 53694000 24217000 29477000 32372 1698;436 12289 12632 50441;50442 50442 SPGMLEPLGSSR 12 0 1 Oxidation (M) _SPGM(ox)LEPLGSSR_ SPGM(1)LEPLGSSR SPGM(55.05)LEPLGSSR 0 1 0 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.8083 2 623.808445 1245.60234 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.608 1 46.608 46.108 47.108 0 0 0 0 0.0062267 1 25214 55.046 33.45 1 32373 619 12290 12633 50443 50443 476 SPGMLEPLGSSR 12 0 1 Oxidation (M) _SPGM(ox)LEPLGSSR_ SPGM(1)LEPLGSSR SPGM(47.3)LEPLGSSR 0 1 0 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.8136 2 623.808445 1245.60234 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.83 1 46.83 46.33 47.33 0 0 0 0 0.012528 1 25346 47.302 35.588 1 32374 619 12290 12633 50444 50444 476 SPGMLEPLGSSR 12 0 1 Oxidation (M) _SPGM(ox)LEPLGSSR_ SPGM(1)LEPLGSSR SPGM(86.01)LEPLGSSR 0 1 0 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.8087 2 623.808445 1245.60234 78454.8 0.64882 0.00040474 0.0039022 2.4342E-06 0.65272 0.00040717 623.808386247149 628.813034650396 45.691 0.42467 45.691 45.467 45.892 0 133 37 5 0 0 0 0.00011422 1 25109 86.014 75.491 1 0.90283 0.89687 0 16162000 8491900 7670200 32375 619 12290 12633 50445 50445 476 SPGPGPGPGAGAEPGATGGSSHFISSR 27 0 1 Unmodified _SPGPGPGPGAGAEPGATGGSSHFISSR_ 0 0 0 Q9ULI0;C9JG15 Q9ULI0 Q9ULI0 ATAD2B ATPase family AAA domain-containing protein 2B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 801.7184 3 798.047393 2391.12035 68843.11 0.49147 0.00039221 -0.21777 -0.00017379 0.2737 0.00021843 798.046931916571 801.717735880897 59.422 0.46804 59.422 59.212 59.681 0 149 39 8 0 0 0 0.00037565 1 29610 30.855 30.855 1 2.6873 2.3631 0 1867200 658300 1208900 32376 2108 12291 12634 50446 50446 SPGSTPTTPTSSQAPQK 17 1 0 Unmodified _SPGSTPTTPTSSQAPQK_ 0 0 0 A0A024R8B6;P35658 A0A024R8B6 A0A024R8B6 NUP214 Nuclear pore complex protein Nup214 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.4196 2 836.412848 1670.81114 NaN NaN NaN -0.52559 -0.00043961 NaN NaN NaN NaN 21.826 0.13603 21.826 21.779 21.915 -1.9073E-06 0 0 0 0.053818 1 7948 30.828 24.386 1 NaN NaN 0 872590 0 872590 32377 246 12292 12635 50447 50447 SPGVAAAVAEDGGLK 15 1 0 Unmodified _SPGVAAAVAEDGGLK_ 0 0 0 E9PQV9;A0A024R3A2;Q9BTE7;E9PLH8;E9PM78;H0YD80;E9PLS2;E9PM04 E9PQV9 E9PQV9 DCUN1D5 DCN1-like protein;DCN1-like protein 5 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.9202 2 671.354074 1340.69359 77679.62 0.43573 0.00029253 0.68774 0.00046172 1.1235 0.00075424 671.354477767957 675.361484254335 64.499 0.45605 64.499 64.231 64.687 0 63 41 4 0 0 0 0.014758 1 37119 48.568 41.637 1 2.462 2.4646 0 7674900 2090500 5584400 32378 132 12293 12636 50448 50448 SPGVAAAVAEDGGLK 15 1 0 Unmodified _SPGVAAAVAEDGGLK_ 0 0 0 E9PQV9;A0A024R3A2;Q9BTE7;E9PLH8;E9PM78;H0YD80;E9PLS2;E9PM04 E9PQV9 E9PQV9 DCUN1D5 DCN1-like protein;DCN1-like protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3625 2 671.354074 1340.69359 NaN NaN NaN 0.27875 0.00018714 NaN NaN NaN NaN 63.347 0.32542 63.347 63.183 63.508 0 0 0 0 5.2095E-06 1 37257 92.19 78.837 1 NaN NaN 0 6277900 0 6277900 32379 132 12293 12636 50449 50449 SPHIETYLK 9 1 0 Unmodified _SPHIETYLK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.293 2 544.292756 1086.57096 80798.28 0.39473 0.00021485 -0.19195 -0.00010448 0.20278 0.00011037 544.292623041028 548.299804376636 50.948 0.76961 50.948 50.518 51.288 0 199 51 6 0 0 0 0.04603 1 24977 39.622 22.382 1 1.3045 1.0416 0 9216300 3958000 5258300 32380 1721 12294 12637 50450 50450 SPIAPEELALVHNLR 15 0 1 Unmodified _SPIAPEELALVHNLR_ 0 0 0 P51398;V9GYW1;V9GYA7;V9GYJ9;V9GYL9;V9GZ61;V9GYC9;V9GZ03 P51398 P51398 DAP3 28S ribosomal protein S29, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.982 3 553.645661 1657.91515 81864.44 0.72189 0.00039967 -0.20498 -0.00011349 0.51691 0.00028618 553.645469709589 556.981618281398 110.38 0.33598 110.38 110.19 110.53 0 60 18 4 0 0 0 0.0056141 1 62833 31.914 28.365 1 1.0282 0.88277 0 2811400 1487000 1324400 32381 1594 12295 12638 50451 50451 SPILVATAVAAR 12 0 1 Unmodified _SPILVATAVAAR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4E132;A0A0J9YVQ7 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.8606 2 584.856055 1167.69756 80215.51 0.78859 0.00046121 -0.0033403 -1.9536E-06 0.78525 0.00045926 584.856081125292 589.860065093507 82.192 0.82536 82.192 81.752 82.577 0 365 70 8 0 0 0 1.1973E-22 2 48911 155.06 141.79 1 1.7099 1.8996 0 72312000 27787000 44525000 32382 522 12296 12639 50452;50453 50452 SPILVATAVAAR 12 0 1 Unmodified _SPILVATAVAAR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4E132;A0A0J9YVQ7 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8565 2 584.856055 1167.69756 80304.71 0.87664 0.00051271 -0.19394 -0.00011343 0.6827 0.00039928 584.855899850379 589.859984518097 80.938 0.8219 80.938 80.591 81.413 0 353 69 8 0 0 0 0.00018756 2 49312 81.338 78.225 1 1.5869 1.835 0 68790000 24727000 44063000 32383 522 12296 12639 50454;50455 50455 SPILVATAVAAR 12 0 1 Unmodified _SPILVATAVAAR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4E132;A0A0J9YVQ7 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.8565 2 584.856055 1167.69756 80460.39 0.59332 0.00034701 0.11765 6.881E-05 0.71097 0.00041582 584.856024589849 589.860173356595 93.728 0.8458 93.728 93.368 94.214 0 268 55 6 0 0 0 0.00086033 2 52288 64.73 61.976 1 1.3386 1.1426 0 5686400 2445600 3240800 32384 522 12296 12639 50456;50457 50457 SPILVATAVAAR 12 0 1 Unmodified _SPILVATAVAAR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4E132;A0A0J9YVQ7 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.8605 2 584.856055 1167.69756 80922.11 0.48829 0.00028558 0.099902 5.8429E-05 0.58819 0.00034401 584.856054524973 589.86013155928 93.503 0.89212 93.503 93.154 94.047 7.6294E-06 257 59 6 0 0 0 0.00018782 2 51526 76.282 70.501 1 1.2739 1.0569 0 5418900 2267100 3151900 32385 522 12296 12639 50458;50459 50459 SPISVPGGSALISNLGK 17 1 0 Unmodified _SPISVPGGSALISNLGK_ 0 0 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.9594 2 798.951412 1595.88827 NaN NaN NaN -0.3922 -0.00031335 NaN NaN NaN NaN 108.37 0.33559 108.37 108.17 108.5 0 0 0 0 0.00044749 1 67666 65.395 45.633 1 NaN NaN 0 7665900 0 7665900 32386 680 12297 12640 50460 50460 SPITGNDLSPPVSFNLMFK 19 1 0 Oxidation (M) _SPITGNDLSPPVSFNLM(ox)FK_ SPITGNDLSPPVSFNLM(1)FK SPITGNDLSPPVSFNLM(44.51)FK 0 1 0 A0A090N8G0;P41250;Q75MN1 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1045.0337 2 1040.52462 2079.03468 64584.73 0.60769 0.00063232 -0.14138 -0.00014711 0.46632 0.00048521 1041.02569188649 1045.03309409768 120.56 0.38638 120.56 120.34 120.73 7.6294E-06 100 27 7 0 0 0 0.00013744 1 77729 44.511 44.511 1 3.4747 3.5 0 10003000 3061600 6941200 32387 457 12298 12641 50461 50461 324 SPITGNDLSPPVSFNLMFK 19 1 0 Oxidation (M) _SPITGNDLSPPVSFNLM(ox)FK_ SPITGNDLSPPVSFNLM(1)FK SPITGNDLSPPVSFNLM(75.59)FK 0 1 0 A0A090N8G0;P41250;Q75MN1 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1044.5316 2 1040.52462 2079.03468 61641.4 0.93518 0.00097308 -0.36537 -0.00038018 0.56981 0.0005929 1040.52328827235 1044.53205231669 120.11 0.40303 120.11 119.9 120.31 -7.6294E-06 127 29 7 0 0 0 4.0556E-06 1 79273 75.589 75.589 1 2.4753 2.5123 0 12824000 3555800 9268300 32388 457 12298 12641 50462 50462 324 SPLAGDFITMQCR 13 0 1 Oxidation (M) _SPLAGDFITM(ox)QCR_ SPLAGDFITM(1)QCR SPLAGDFITM(77.74)QCR 0 1 0 Q6FI97;Q53FS0;O96019 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.3564 2 756.352693 1510.69083 NaN NaN NaN 0.30331 0.00022941 NaN NaN NaN NaN 78.503 0.54939 78.503 78.189 78.738 0 0 0 0 0.00034004 2 46342 77.744 59.433 1 NaN NaN 0 6537100 6537100 0 32389 1434 12299 12642 50463;50464 50463 1131 SPLAGDFITMQCR 13 0 1 Oxidation (M) _SPLAGDFITM(ox)QCR_ SPLAGDFITM(1)QCR SPLAGDFITM(84.66)QCR 0 1 0 Q6FI97;Q53FS0;O96019 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.353 2 756.352693 1510.69083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.253 1 77.253 76.753 77.753 0 0 0 0 0.00022776 1 46707 84.658 31.331 1 32390 1434 12299 12642 50465 50465 1131 SPLAQDSPSQGSPALYR 17 0 1 Unmodified _SPLAQDSPSQGSPALYR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.449 2 887.44194 1772.86933 64413.27 0.36553 0.00032439 0.075347 6.6866E-05 0.44088 0.00039125 887.943359999436 892.447110476627 60.929 0.37779 60.929 60.712 61.09 0 114 36 5 0 0 0 3.4721E-18 1 35626 132.86 121.27 1 0.76986 0.76767 0 16616000 10319000 6297300 32391 1233 12300 12643 50466 50466 SPLAQDSPSQGSPALYR 17 0 1 Unmodified _SPLAQDSPSQGSPALYR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 892.9488 2 887.44194 1772.86933 64942.64 0.26581 0.00023589 0.68197 0.00060521 0.94779 0.00084111 887.943834662625 892.44712835942 71.567 0.84121 71.567 71.087 71.928 0 273 60 8 0 0 0 4.9011E-05 2 37663 77.912 77.912 1 1.6681 1.3649 0 13421000 5351600 8069000 32392 1233 12300 12643 50467;50468 50468 SPLFGQYFVLENPGTIK 17 1 0 Unmodified _SPLFGQYFVLENPGTIK_ 0 0 0 Q5VT66;H7BYZ9 Q5VT66 Q5VT66 MARC1 Mitochondrial amidoxime-reducing component 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 959.517 2 955.506551 1908.99855 64003.88 0.70004 0.0006689 0.081204 7.7591E-05 0.78125 0.00074649 956.007939017613 960.015202771815 122.48 0.37683 122.48 122.25 122.62 7.6294E-06 106 27 7 0 0 0 1.2639E-06 3 79248 88.552 88.552 1 1.5078 1.5161 0 7348600 3282100 4066500 32393 1831 12301 12644 50469;50470;50471 50471 SPLFGQYFVLENPGTIK 17 1 0 Unmodified _SPLFGQYFVLENPGTIK_ 0 0 0 Q5VT66;H7BYZ9 Q5VT66 Q5VT66 MARC1 Mitochondrial amidoxime-reducing component 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.5152 2 955.506551 1908.99855 64520 0.73735 0.00070454 0.39763 0.00037994 1.135 0.0010845 955.506400127374 959.514551091782 121.9 0.34955 121.9 121.73 122.08 -7.6294E-06 92 23 5 0 0 0 7.0601E-09 2 80741 100.22 100.22 1 1.6582 1.6747 0 8357700 3430900 4926700 32394 1831 12301 12644 50472;50473 50472 SPLFSVQR 8 0 1 Unmodified _SPLFSVQR_ 0 0 0 Q8WUA4;Q53QN0;A0A087WZD8 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.2654 2 467.261259 932.507966 NaN NaN NaN 2.1741 0.0010159 NaN NaN NaN NaN 59.527 0.31919 59.527 59.36 59.68 0 0 0 0 0.0059012 1 33954 86.833 13.168 1 NaN NaN 0 5137400 0 5137400 32395 1938 12302 12645 50474 50474 SPLGEVAIR 9 0 1 Unmodified _SPLGEVAIR_ 0 0 0 A0A024R994;O75131 A0A024R994 A0A024R994 CPNE3 Copine-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.2789 2 471.274367 940.53418 NaN NaN NaN -0.098221 -4.6289E-05 NaN NaN NaN NaN 63.582 0.53669 63.582 63.269 63.805 3.8147E-06 0 0 0 0.012937 1 36379 64.42 23.193 1 NaN NaN 0 7936500 0 7936500 32396 271 12303 12646 50475 50475 SPLGEVAIR 9 0 1 Unmodified _SPLGEVAIR_ 0 0 0 A0A024R994;O75131 A0A024R994 A0A024R994 CPNE3 Copine-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.2776 2 471.274367 940.53418 NaN NaN NaN -0.5491 -0.00025878 NaN NaN NaN NaN 62.022 0.67113 62.022 61.808 62.48 0 0 0 0 0.0076479 1 36417 69.812 23.796 1 NaN NaN 0 9106100 0 9106100 32397 271 12303 12646 50476 50476 SPLKPESQLDLR 12 1 1 Unmodified _SPLKPESQLDLR_ 0 0 1 G3V167;A8K214;Q9UGN5 G3V167 G3V167 PARP2 Poly [ADP-ribose] polymerase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.5928 3 461.592786 1381.75653 89436.91 -0.040737 -1.8804E-05 -0.090277 -4.1671E-05 -0.13101 -6.0475E-05 461.592762407595 467.600094067271 52.868 0.36251 52.868 52.647 53.01 0 116 26 7 0 0 0 0.0034344 1 29482 48.524 48.524 1 0.69937 0.82446 0 35179000 21808000 13371000 32398 706 12304 12647 50477 50477 SPLLPAVLEGLAK 13 1 0 Unmodified _SPLLPAVLEGLAK_ 0 0 0 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.4005 2 654.400295 1306.78604 75611.34 0.94208 0.00061649 -0.0039445 -2.5813E-06 0.93813 0.00061391 654.400123569807 658.407213839636 123.79 0.64429 123.79 123.49 124.13 0 273 45 9 0 0 0 6.8805E-09 2 80262 118.28 118.28 1 1.1226 1.2435 0 58406000 27245000 31161000 32399 780 12305 12648 50478;50479 50479 SPLLPAVLEGLAK 13 1 0 Unmodified _SPLLPAVLEGLAK_ 0 0 0 A8K905;Q8WTT2;B4DXL4 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.4008 2 654.400295 1306.78604 75515.53 1.0083 0.0006598 -0.068663 -4.4933E-05 0.93959 0.00061487 654.40014718808 658.407181142558 123.27 0.6333 123.27 122.99 123.62 0 291 46 8 0 0 0 9.3779E-05 2 81823 93.096 93.096 1 1.0884 1.2258 0 58510000 27308000 31202000 32400 780 12305 12648 50480;50481 50481 SPLLQLPHIEEDNLR 15 0 1 Unmodified _SPLLQLPHIEEDNLR_ 0 0 0 B3KNE7;B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KWU4 B3KNE7 B3KNE7 SEC63 Translocation protein SEC63 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.989 3 591.987976 1772.9421 85153.03 0.44639 0.00026426 0.24728 0.00014639 0.69368 0.00041065 592.322360263143 595.658486772584 101.84 0.43834 101.84 101.64 102.08 0 73 33 4 0 0 0 0.012271 1 64136 39.517 39.517 1 0.63621 0.63271 0 8329500 3759400 4570200 32401 584 12306 12649 50482 50482 SPLLQLPHIEEDNLR 15 0 1 Unmodified _SPLLQLPHIEEDNLR_ 0 0 0 B3KNE7;B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KWU4 B3KNE7 B3KNE7 SEC63 Translocation protein SEC63 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.3224 3 591.987976 1772.9421 NaN NaN NaN -0.32172 -0.00019045 NaN NaN NaN NaN 114.32 0.29456 114.32 114.18 114.48 0 0 0 0 8.902E-05 1 66762 61.732 52.478 1 NaN NaN 0 1070000 1070000 0 32402 584 12306 12649 50483 50483 SPLPIVR 7 0 1 Unmodified _SPLPIVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 396.254 2 391.250163 780.485774 96841.05 0.030579 1.1964E-05 0.0083662 3.2733E-06 0.038945 1.5237E-05 391.250072549917 396.254173836753 59.902 0.74067 59.902 59.657 60.398 0 287 64 8 0 0 0 0.028425 1 34062 71.949 24.904 1 0.84633 1.002 0 383430000 200770000 182660000 32403 908 12307 12650 50484 50484 SPLPIVR 7 0 1 Unmodified _SPLPIVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 391.2502 2 391.250163 780.485774 95093.67 0.62791 0.00024567 -0.40875 -0.00015992 0.21916 8.5746E-05 391.249897586947 396.254006234079 58.616 0.76945 58.616 58.451 59.221 -3.8147E-06 306 74 6 0 0 0 0.010175 2 34027 121.68 56.353 1 0.91127 1.0528 0 252830000 130290000 122540000 32404 908 12307 12650 50485;50486 50486 SPLPIVR 7 0 1 Unmodified _SPLPIVR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 391.2501 2 391.250163 780.485774 96557.84 0.011082 4.336E-06 0.12165 4.7595E-05 0.13273 5.1931E-05 391.250111379515 396.254258634576 68.701 1.0038 68.701 68.381 69.385 0 310 70 7 0 0 0 0.052963 1 35041 53.71 22.131 1 1.5377 1.3413 0 31902000 12148000 19754000 32405 908 12307 12650 50487 50487 SPLQSVVVR 9 0 1 Unmodified _SPLQSVVVR_ 0 0 0 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.7999 2 492.795466 983.57638 85391.89 0.19586 9.6518E-05 -0.10289 -5.0703E-05 0.09297 4.5815E-05 492.795135572211 497.799647564599 57.016 0.66022 57.016 56.738 57.399 0 227 49 7 0 0 0 0.00016983 1 32797 107.57 86.274 1 0.87122 1.007 0 69235000 36563000 32672000 32406 2128 12308 12651 50488 50488 SPLQSVVVR 9 0 1 Unmodified _SPLQSVVVR_ 0 0 0 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.7997 2 492.795466 983.57638 87321.14 0.28436 0.00014013 -0.48655 -0.00023977 -0.20219 -9.9638E-05 492.795147369217 497.799424475871 67.045 0.57548 67.045 66.78 67.355 0 174 39 6 0 0 0 0.012016 1 34819 57.859 39.873 1 0.95925 0.81712 0 5489900 2701700 2788200 32407 2128 12308 12651 50489 50489 SPLQSVVVR 9 0 1 Unmodified _SPLQSVVVR_ 0 0 0 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.7993 2 492.795466 983.57638 86639.35 0.093571 4.6111E-05 -0.3495 -0.00017223 -0.25593 -0.00012612 492.795199621129 497.799516470681 67.437 0.59828 67.437 67.116 67.714 0 144 35 6 0 0 0 0.0016671 1 34277 82.426 64.44 1 0.92992 0.79212 0 4571600 2567300 2004300 32408 2128 12308 12651 50490 50490 SPLSALAR 8 0 1 Unmodified _SPLSALAR_ 0 0 0 Q9BQG0;I3L1L3;B4DE42;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 407.7438 2 407.742702 813.470852 96711.97 0.10723 4.3721E-05 -0.097838 -3.9893E-05 0.0093884 3.8281E-06 407.742691177527 412.746827773407 53.717 0.54958 53.717 53.556 54.106 0 134 43 5 0 0 0 0.0058079 2 30085 89.296 13.261 1 0.89617 0.99037 0 57141000 25958000 31183000 32409 1997 12309 12652 50491;50492 50492 SPLSALAR 8 0 1 Unmodified _SPLSALAR_ 0 0 0 Q9BQG0;I3L1L3;B4DE42;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 407.7425 2 407.742702 813.470852 96314.7 0.19095 7.7858E-05 -0.25272 -0.00010304 -0.06177 -2.5186E-05 407.742624381326 412.746705628253 52.287 0.60107 52.287 52.114 52.715 3.8147E-06 177 45 6 0 0 0 0.0010071 2 29745 117.16 31.074 1 0.88217 0.96382 0 37291000 17305000 19986000 32410 1997 12309 12652 50493;50494 50494 SPLTQEQLIPNLAMK 15 1 0 Oxidation (M) _SPLTQEQLIPNLAM(ox)K_ SPLTQEQLIPNLAM(1)K SPLTQEQLIPNLAM(94.54)K 0 1 0 Q9UNE7;H3BTA3 Q9UNE7 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 853.9688 2 849.95838 1697.90221 67381.84 0.83705 0.00071146 1.3138 0.0011167 2.1509 0.0018281 849.960003059493 853.966388620315 100.5 0.50016 100.5 100.22 100.72 0 99 40 4 0 0 0 3.8515E-06 1 63145 94.538 94.538 1 1.5899 1.615 0 12750000 5862100 6888200 32411 2115 12310 12653 50495 50495 1940 SPLYLVSR 8 0 1 Unmodified _SPLYLVSR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7756 2 467.77146 933.528367 91845.33 -0.048492 -2.2683E-05 0.2341 0.0001095 0.18561 8.6822E-05 467.771524222166 472.775605611685 66.421 0.68864 66.421 65.973 66.661 0 160 59 4 0 0 0 0.014518 3 38226 67.993 49.62 1 1.6729 1.7184 0 14287000 5262300 9024400 32412 1945 12311 12654 50496;50497;50498 50496 SPLYLVSR 8 0 1 Unmodified _SPLYLVSR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 472.7755 2 467.77146 933.528367 89836.64 0.26271 0.00012289 -0.20708 -9.6867E-05 0.055626 2.602E-05 467.771184797629 472.775353651059 75.505 1.0083 75.505 75.146 76.155 7.6294E-06 294 71 6 0 0 0 0.023837 1 40278 51.346 47.209 1 2.7799 2.3539 0 4996300 1316500 3679800 32413 1945 12311 12654 50499 50499 SPLYLVSR 8 0 1 Unmodified _SPLYLVSR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 472.7752 2 467.77146 933.528367 90435.23 0.16157 7.5579E-05 -0.10344 -4.8384E-05 0.058136 2.7195E-05 467.77130131929 472.775415286142 75.768 0.93588 75.768 75.387 76.323 0 275 65 6 0 0 0 0.042552 1 39397 51.346 46.205 1 2.7405 2.3768 0 3462100 1061000 2401100 32414 1945 12311 12654 50500 50500 SPMVEQAVQTGSADNLNAK 19 1 0 Oxidation (M) _SPM(ox)VEQAVQTGSADNLNAK_ SPM(1)VEQAVQTGSADNLNAK SPM(67.12)VEQAVQTGSADNLNAK 0 1 0 Q5TBP9;Q9BX40;B4DQC9;Q5TBQ1;Q5TBQ0 Q5TBP9 Q5TBP9 LSM14B Protein LSM14 homolog B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 992.4803 2 988.473111 1974.93167 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.986 1 51.986 51.486 52.486 0 0 0 0 3.8479E-05 1 28824 67.115 53.915 1 32415 1825 12312 12655 50501 50501 1680 SPNLWLK 7 1 0 Unmodified _SPNLWLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 429.2478 2 429.247621 856.480688 92846.54 -0.2996 -0.0001286 0.63005 0.00027045 0.33045 0.00014184 429.247700209172 433.254699086503 78.61 1.0151 78.61 78.261 79.276 0 195 64 6 0 0 0 0.056031 1 41338 52.299 32.453 1 0.32654 0.26221 0 3031800 2234600 797190 32416 1665 12313 12656 50502 50502 SPNQNVQQAAAGALR 15 0 1 Unmodified _SPNQNVQQAAAGALR_ 0 0 0 A0A024R952;Q13835 A0A024R952 A0A024R952 PKP1 Plakophilin-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.8976 2 762.897503 1523.78045 NaN NaN NaN 0.28799 0.0002197 NaN NaN NaN NaN 49.419 0.21954 49.419 49.316 49.535 0 0 0 0 5.5418E-23 1 27116 136.5 115.63 1 NaN NaN 0 7280300 7280300 0 32417 270 12314 12657 50503 50503 SPNQNVQQAAAGALR 15 0 1 Unmodified _SPNQNVQQAAAGALR_ 0 0 0 A0A024R952;Q13835 A0A024R952 A0A024R952 PKP1 Plakophilin-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.8987 2 762.897503 1523.78045 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.331 1 48.331 47.831 48.831 3.8147E-06 0 0 0 0.00022564 1 27019 84.658 68.126 1 32418 270 12314 12657 50504 50504 SPNQNVQQAAAGALR 15 0 1 Unmodified _SPNQNVQQAAAGALR_ 0 0 0 A0A024R952;Q13835 A0A024R952 A0A024R952 PKP1 Plakophilin-1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.897 2 762.897503 1523.78045 NaN NaN NaN -0.58895 -0.00044931 NaN NaN NaN NaN 58.315 0.36465 58.315 58.143 58.507 -3.8147E-06 0 0 0 4.1405E-05 1 29024 84.658 71.702 1 NaN NaN 0 1319300 1319300 0 32419 270 12314 12657 50505 50505 SPPILPTLDSLK 12 1 0 Unmodified _SPPILPTLDSLK_ 0 0 0 Q9NVV4 Q9NVV4 Q9NVV4 MTPAP Poly(A) RNA polymerase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.8834 2 640.876653 1279.73875 76690.08 0.74004 0.00047427 -0.4948 -0.0003171 0.24524 0.00015717 641.377516090753 644.883451047102 120.85 0.30981 120.85 120.7 121.01 7.6294E-06 55 14 6 0 0 0 0.0041381 1 71872 54.259 54.259 1 3.5338 2.8274 0 2894900 504230 2390600 32420 2075 12315 12658 50506 50506 SPPILPTLDSLK 12 1 0 Unmodified _SPPILPTLDSLK_ 0 0 0 Q9NVV4 Q9NVV4 Q9NVV4 MTPAP Poly(A) RNA polymerase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.8838 2 640.876653 1279.73875 79100.34 0.8103 0.0005193 -0.4839 -0.00031012 0.3264 0.00020918 640.876550397143 644.883376340904 120.65 0.28574 120.65 120.49 120.78 0 51 14 5 0 0 0 0.020076 1 70751 39.625 39.625 1 4.2506 3.3831 0 1988900 356090 1632800 32421 2075 12315 12658 50507 50507 SPPNVQFTFQQPK 13 1 0 Unmodified _SPPNVQFTFQQPK_ 0 0 0 O15031 O15031 O15031 PLXNB2 Plexin-B2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.903 2 759.39099 1516.76743 NaN NaN NaN 2.3895 0.0018145 NaN NaN NaN NaN 79.954 0.2747 79.954 79.813 80.088 0 0 0 0 0.017969 1 48649 48.998 31.134 1 NaN NaN 0 5942300 0 5942300 32422 1373 12316 12659 50508 50508 SPPPELTDTATSTK 14 1 0 Unmodified _SPPPELTDTATSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.8616 2 722.861928 1443.7093 71151.94 0.92881 0.0006714 0.097767 7.0672E-05 1.0266 0.00074207 722.862206703389 726.868796609321 41.247 1.0743 41.247 40.727 41.801 0 396 91 7 0 0 0 9.7987E-06 1 21519 99.215 89.783 1 2.1387 2.4051 0 71040000 23463000 47577000 32423 1569 12317 12660 50509 50509 SPPPELTDTATSTK 14 1 0 Unmodified _SPPPELTDTATSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.869 2 722.861928 1443.7093 72374.77 0.78974 0.00057087 -0.19857 -0.00014354 0.59117 0.00042733 722.86180380789 726.868782252023 40.228 0.90274 40.228 39.612 40.515 0 348 77 7 0 0 0 0.0002233 1 21172 66.023 66.023 1 1.9583 2.1947 0 80229000 24976000 55253000 32424 1569 12317 12660 50510 50510 SPPPELTDTATSTK 14 1 0 Unmodified _SPPPELTDTATSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.8699 2 722.861928 1443.7093 72873.09 0.64569 0.00046675 0.51083 0.00036926 1.1565 0.00083601 722.86198260768 726.868708664823 40.548 0.43217 40.548 40.494 40.926 0 117 31 7 0 0 0 2.4074E-09 1 21695 116.54 116.54 1 2.0239 2.0841 0 32480000 11220000 21260000 32425 1569 12317 12660 50511 50511 SPPPELTDTATSTK 14 1 0 Unmodified _SPPPELTDTATSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.8622 2 722.861928 1443.7093 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.938 1 39.938 39.438 40.438 0 0 0 0 0.0024437 1 21241 63.073 35.77 1 32426 1569 12317 12660 50512 50512 SPPPELTDTATSTK 14 1 0 Unmodified _SPPPELTDTATSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.8693 2 722.861928 1443.7093 71880.55 0.48405 0.0003499 0.12519 9.0492E-05 0.60923 0.00044039 722.862330596532 726.869038615371 47.379 1.4251 47.379 46.756 48.181 0 571 104 9 0 0 0 0.00020631 4 23122 68.44 68.44 1 3.7574 2.9741 0 18437000 3794700 14642000 32427 1569 12317 12660 50513;50514;50515;50516 50515 SPPPELTDTATSTK 14 1 0 Unmodified _SPPPELTDTATSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 726.8695 2 722.861928 1443.7093 72892.58 0.33728 0.00024381 0.066821 4.8303E-05 0.40411 0.00029211 722.862126268845 726.869053303965 47.677 1.7409 47.677 46.932 48.673 0 605 143 7 0 0 0 0.00014072 4 22849 78.342 78.342 1 3.9598 3.1816 0 16187000 2996000 13191000 32428 1569 12317 12660 50517;50518;50519;50520 50519 SPPPESMDTPTSTR 14 0 1 Oxidation (M) _SPPPESM(ox)DTPTSTR_ SPPPESM(1)DTPTSTR SPPPESM(89.8)DTPTSTR 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.8447 2 759.84067 1517.66679 NaN NaN NaN -3.1145 -0.0023665 NaN NaN NaN NaN 20.292 0.64222 20.292 20.001 20.644 0 0 0 0 2.6906E-05 1 6639 89.805 56.58 1 NaN NaN 0 24782000 0 24782000 32429 1569 12318 12661 50521 50521 1342 SPPPESMDTPTSTR 14 0 1 Oxidation (M) _SPPPESM(ox)DTPTSTR_ SPPPESM(1)DTPTSTR SPPPESM(71.56)DTPTSTR 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.8443 2 759.84067 1517.66679 NaN NaN NaN -3.0436 -0.0023126 NaN NaN NaN NaN 20.289 0.65351 20.289 19.977 20.63 0 0 0 0 0.00043013 1 6429 71.555 45.041 1 NaN NaN 0 16649000 0 16649000 32430 1569 12318 12661 50522 50522 1342 SPPPESVDTPTSTK 14 1 0 Unmodified _SPPPESVDTPTSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.8546 2 721.854103 1441.69365 71591.16 0.81117 0.00058555 0.15775 0.00011387 0.96892 0.00069942 721.853959287939 725.861220345033 28.804 0.68912 28.804 28.485 29.174 0 208 37 8 0 0 0 7.932E-06 3 13627 102.4 102.4 1 2.0822 2.3207 0 61710000 20141000 41569000 32431 1569 12319 12662 50523;50524;50525 50525 SPPPESVDTPTSTK 14 1 0 Unmodified _SPPPESVDTPTSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.8549 2 721.854103 1441.69365 71925.67 0.62177 0.00044882 -0.021356 -1.5416E-05 0.60041 0.00043341 721.853971855917 725.861164749758 28.081 0.87799 28.081 27.795 28.673 0 200 58 8 0 0 0 1.2554E-06 3 13234 128.85 128.85 1 2.2364 2.5189 0 69271000 22986000 46285000 32432 1569 12319 12662 50526;50527;50528 50527 SPPPESVDTPTSTK 14 1 0 Unmodified _SPPPESVDTPTSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.8548 2 721.854103 1441.69365 72441.62 0.50677 0.00036582 0.15627 0.0001128 0.66304 0.00047862 721.854121454425 725.861147120294 32.784 1.3272 32.784 32.333 33.66 0 337 88 8 0 0 0 0.00023302 3 14147 64.64 64.64 1 3.9223 3.0854 0 17313000 3471800 13841000 32433 1569 12319 12662 50529;50530;50531 50529 SPPPESVDTPTSTK 14 1 0 Unmodified _SPPPESVDTPTSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.8613 2 721.854103 1441.69365 72144.77 0.58 0.00041868 -0.082068 -5.9241E-05 0.49793 0.00035944 721.853848946755 725.861100306804 32.904 0.53357 32.904 32.559 33.093 0 112 25 6 0 0 0 0.00019164 3 13702 85.845 85.845 1 3.7234 3.0363 0 6489300 1533400 4956000 32434 1569 12319 12662 50532;50533;50534 50533 SPPPESVDTPTSTK 14 1 0 Unmodified _SPPPESVDTPTSTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.8616 2 721.854103 1441.69365 71926.35 0.53139 0.00038358 -0.15402 -0.00011118 0.37737 0.0002724 721.854080692839 725.860895445096 33.254 0.87777 33.254 33.034 33.912 0 247 73 5 0 0 0 0.00018144 1 14163 89.301 89.301 1 3.8832 3.1657 0 7663900 1380400 6283500 32435 1569 12319 12662 50535 50535 SPPSQSVQLNDSLSK 15 1 0 Unmodified _SPPSQSVQLNDSLSK_ 0 0 0 B2R6H3;Q8NI77 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.9047 2 793.904659 1585.79476 70674.55 0.89123 0.00070755 0.14021 0.00011131 1.0314 0.00081886 793.904569651583 798.412928348265 52.609 0.30152 52.609 52.442 52.744 0 52 21 4 0 0 0 7.9386E-06 1 29992 94.547 80.127 1 1.2974 1.2862 0 5980600 3036900 2943700 32436 842 12320 12663 50536 50536 SPPSQSVQLNDSLSK 15 1 0 Unmodified _SPPSQSVQLNDSLSK_ 0 0 0 B2R6H3;Q8NI77 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 798.4141 2 793.904659 1585.79476 74014.2 0.46598 0.00036994 0.95573 0.00075875 1.4217 0.0011287 793.904747342142 797.913211305037 62.493 0.28519 62.493 62.331 62.616 0 52 20 4 0 0 0 0.047761 1 32062 23.676 23.676 1 1.3862 1.1665 0 1398500 526670 871830 32437 842 12320 12663 50537 50537 SPQNQYPAELMR 12 0 1 Oxidation (M) _SPQNQYPAELM(ox)R_ SPQNQYPAELM(1)R SPQNQYPAELM(76.33)R 0 1 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;C9J8M6;A0A0S2Z441 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.3481 2 725.343183 1448.67181 72253.31 0.88395 0.00064117 -0.21274 -0.00015431 0.6712 0.00048685 725.342402648561 730.347181153945 41.74 0.42905 41.74 41.501 41.93 0 111 35 6 0 0 0 9.1115E-05 1 21993 76.332 57.089 1 2.02 2.0921 0 10347000 3366200 6980400 32438 560 12321 12664 50538 50538 419 SPQPDPVDTPASTK 14 1 0 Unmodified _SPQPDPVDTPASTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.3621 2 720.354271 1438.69399 71131.63 0.57494 0.00041416 -0.10179 -7.3322E-05 0.47315 0.00034084 720.354303959214 724.361442428583 32.71 1.1544 32.71 32.007 33.162 0 590 109 9 0 0 0 0.00012516 3 16455 80.979 80.979 1 1.7959 2.0302 0 144640000 53006000 91631000 32439 1569 12322 12665 50539;50540;50541 50541 SPQPDPVDTPASTK 14 1 0 Unmodified _SPQPDPVDTPASTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.3636 2 720.354271 1438.69399 71736.03 0.71271 0.00051341 -0.22636 -0.00016306 0.48636 0.00035035 720.353990607172 724.361167215999 32.279 0.8355 32.279 31.813 32.648 0 449 78 9 0 0 0 2.6004E-05 2 15857 96.745 89.698 1 1.755 1.9948 0 144230000 55684000 88545000 32440 1569 12322 12665 50542;50543 50542 SPQPDPVDTPASTK 14 1 0 Unmodified _SPQPDPVDTPASTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.856 2 720.354271 1438.69399 71193.62 0.46957 0.00033826 0.017352 1.25E-05 0.48692 0.00035076 720.354551007006 724.36138146144 37.632 1.3736 37.632 37.175 38.549 0 612 111 10 0 0 0 0.014428 1 16369 35.523 35.523 1 3.5767 3.0599 0 115730000 24115000 91611000 32441 1569 12322 12665 50544 50544 SPQPDPVGTPTIFK 14 1 0 Unmodified _SPQPDPVGTPTIFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.4013 2 742.393199 1482.77184 68709.75 0.6614 0.00049102 -0.25074 -0.00018615 0.41065 0.00030487 742.392810377444 746.400591898162 85.929 0.7795 85.929 85.614 86.393 0 311 65 7 0 0 0 2.9382E-05 1 51616 96.229 89.696 1 1.5287 1.7252 0 79026000 26918000 52107000 32442 1569 12323 12666 50545 50545 SPQPDPVGTPTIFK 14 1 0 Unmodified _SPQPDPVGTPTIFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 746.4008 2 742.393199 1482.77184 69826.37 0.8094 0.0006009 0.080783 5.9973E-05 0.89019 0.00066087 742.393351658864 746.400291135997 98.452 0.6891 98.452 98.15 98.839 0 211 41 7 0 0 0 0.0045563 1 55495 45.257 45.257 1 3.2868 2.6116 0 10061000 2404500 7656600 32443 1569 12323 12666 50546 50546 SPQPDPVGTPTIFK 14 1 0 Unmodified _SPQPDPVGTPTIFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 746.9019 2 742.393199 1482.77184 69485.02 0.7381 0.00054796 0.0086386 6.4132E-06 0.74674 0.00055437 742.392680815089 746.400332991484 98.321 0.76228 98.321 97.977 98.739 7.6294E-06 196 46 7 0 0 0 0.053991 1 54479 24.352 24.352 1 3.5155 2.8774 0 8483600 1975500 6508100 32444 1569 12323 12666 50547 50547 SPQPDPVGTPTIFKPQSK 18 2 0 Unmodified _SPQPDPVGTPTIFKPQSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.3539 3 642.010669 1923.01018 75951.64 0.71468 0.00045883 -0.058944 -3.7843E-05 0.65573 0.00042099 642.34506518099 647.353247194988 71.568 0.78128 71.568 71.196 71.977 0 440 69 9 0 0 0 7.8948E-06 2 41648 74.657 74.657 1 2.3364 2.7575 0 93227000 27652000 65574000 32445 1569 12324 12667 50548;50549 50548 SPQPDPVGTPTIFKPQSK 18 2 0 Unmodified _SPQPDPVGTPTIFKPQSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.0114 3 642.010669 1923.01018 75996.68 0.59561 0.00038239 0.04987 3.2017E-05 0.64548 0.00041441 642.345185705211 647.353284950619 70.184 0.81961 70.184 69.819 70.639 0 437 65 9 0 0 0 1.4931E-05 2 41895 64.83 64.83 1 2.2315 2.5932 0 125230000 38015000 87215000 32446 1569 12324 12667 50550;50551 50551 SPQPDPVGTPTIFKPQSK 18 2 0 Unmodified _SPQPDPVGTPTIFKPQSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.3538 3 642.010669 1923.01018 74539.31 0.63137 0.00040535 -0.0082798 -5.3157E-06 0.62309 0.00040003 642.345074851458 647.353407883336 81.678 1.0445 81.678 81.309 82.353 0 365 61 9 0 0 0 1.0492E-06 2 44216 85.808 85.808 1 4.1402 3.5129 0 51183000 10236000 40947000 32447 1569 12324 12667 50552;50553 50552 SPQPDPVGTPTIFKPQSK 18 2 0 Unmodified _SPQPDPVGTPTIFKPQSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 647.6879 3 642.010669 1923.01018 NaN NaN NaN 0.30018 0.00019272 NaN NaN NaN NaN 81.723 0.82768 81.723 81.382 82.21 0 0 0 0 3.2759E-17 1 43406 112.74 108.84 1 NaN NaN 0 37146000 0 37146000 32448 1569 12324 12667 50554 50554 SPQPESFK 8 1 0 Unmodified _SPQPESFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2366 2 460.229625 918.444697 NaN NaN NaN -0.2618 -0.00012049 NaN NaN NaN NaN 23.758 0.73086 23.758 23.507 24.237 0 0 0 0 0.0027895 1 9457 106.36 50.915 1 NaN NaN 0 126530000 0 126530000 32449 1569 12325 12668 50555 50555 SPQPESFK 8 1 0 Unmodified _SPQPESFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2368 2 460.229625 918.444697 87235.07 0.17436 8.0245E-05 0.030066 1.3837E-05 0.20442 9.4082E-05 460.229409691211 464.236726294553 23.504 0.38645 23.504 23.339 23.725 0 83 16 7 0 0 0 0.0015581 2 9368 107.9 58.306 1 1.8199 2.0346 0 105530000 37407000 68126000 32450 1569 12325 12668 50556;50557 50556 SPQPESFK 8 1 0 Unmodified _SPQPESFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.2367 2 460.229625 918.444697 87932.3 0.08259 3.8011E-05 -0.25912 -0.00011926 -0.17653 -8.1245E-05 460.229668590479 464.236528025939 25.927 0.63951 25.927 25.718 26.357 0 115 26 8 0 0 0 0.0021447 2 9563 102.46 39.75 1 3.4605 2.9373 0 60912000 14093000 46819000 32451 1569 12325 12668 50558;50559 50558 SPQPESFK 8 1 0 Unmodified _SPQPESFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 464.2366 2 460.229625 918.444697 88416.05 0.082477 3.7958E-05 0.12001 5.523E-05 0.20248 9.3189E-05 460.229577461888 464.236703215375 25.94 0.38036 25.94 25.744 26.125 0 72 15 7 0 0 0 0.01426 1 9104 63.419 12.453 1 3.698 3.0207 0 8109600 1663500 6446100 32452 1569 12325 12668 50560 50560 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 1 0 Unmodified _SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q5RI18 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.1494 4 909.644887 3634.55044 63748.57 0.61629 0.0005606 -0.3775 -0.00034339 0.23879 0.00021722 910.39640284868 912.149602130744 105.93 0.60497 105.93 105.67 106.28 0 375 44 13 0 0 0 0.00023576 1 65681 35.572 35.572 1 1.1648 1.289 0 57920000 26717000 31203000 32453 999 12326 12669 50561 50561 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 1 0 Unmodified _SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q5RI18 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 910.147 4 909.644887 3634.55044 63423.75 0.75029 0.0006825 -0.12941 -0.00011772 0.62088 0.00056478 910.396695755256 911.899334109214 105.2 0.58943 105.2 104.96 105.55 0 403 43 12 0 0 0 0.0014478 1 66758 28.59 28.59 1 1.1786 1.3192 0 109640000 49618000 60023000 32454 999 12326 12669 50562 50562 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 1 0 Unmodified _SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q5RI18 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 911.8994 4 909.644887 3634.55044 63457.24 0.35716 0.00032489 -0.058625 -5.3328E-05 0.29853 0.00027156 910.146060376648 911.898996579429 116.3 0.84729 116.3 116.07 116.92 0 315 34 14 0 0 0 3.8923E-07 1 68298 47.647 47.647 1 0.82948 0.6815 0 38334000 19070000 19265000 32455 999 12326 12669 50563 50563 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 1 0 Unmodified _SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q5RI18 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 911.8995 4 909.644887 3634.55044 62970.86 0.69805 0.00063498 0.061681 5.6108E-05 0.75973 0.00069109 909.895870948855 912.149536691839 116.2 0.77661 116.2 116.01 116.79 0 346 36 15 0 0 0 0.023568 1 67311 22.579 22.579 1 0.80238 0.67961 0 60937000 34065000 26872000 32456 999 12326 12669 50564 50564 SPQQSAALPR 10 0 1 Unmodified _SPQQSAALPR_ 0 0 0 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.7894 2 527.78563 1053.55671 82264.71 0.049574 2.6164E-05 0.266 0.00014039 0.31557 0.00016655 527.785469418941 532.789932797472 29.615 0.49677 29.615 29.36 29.856 -1.9073E-06 99 30 4 0 0 0 0.0020391 1 11597 70.908 52.684 1 2.28 1.9848 0 2618700 836720 1781900 32457 491 12327 12670 50565 50565 SPQSDPADTPTNTK 14 1 0 Unmodified _SPQSDPADTPTNTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.8387 2 729.838985 1457.66342 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.042 1 18.042 17.542 18.542 0 0 0 0 0.00044894 1 5096 83.182 56.067 1 32458 1569 12328 12671 50566 50566 SPQSDPADTPTNTK 14 1 0 Unmodified _SPQSDPADTPTNTK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.8462 2 729.838985 1457.66342 70374.3 0.14424 0.00010527 0.50375 0.00036766 0.64798 0.00047292 729.839462231763 733.846428047945 19.451 0.20003 19.451 19.349 19.549 0 20 6 6 0 0 0 0.036455 1 5186 29.303 29.303 1 2.7325 2.3061 0 1427300 297530 1129800 32459 1569 12328 12671 50567 50567 SPQVPAAQQMLNFPEK 16 1 0 Oxidation (M) _SPQVPAAQQM(ox)LNFPEK_ SPQVPAAQQM(1)LNFPEK SPQVPAAQQM(86.77)LNFPEK 0 1 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.4553 2 900.951086 1799.88762 64006.71 0.76913 0.00069295 -0.12587 -0.0001134 0.64326 0.00057955 900.950464175859 904.958341250587 76.165 0.45804 76.165 75.974 76.432 0 172 36 7 0 0 0 5.7763E-06 2 44911 86.772 86.772 1 0.98742 0.96914 0 20440000 11218000 9221900 32460 1798 12329 12672 50568;50569 50569 1664 SPSAIPEQNHSLNDQAK 17 1 0 Unmodified _SPSAIPEQNHSLNDQAK_ 0 0 0 Q13129;Q59GL0 Q13129 Q13129 RLF Zinc finger protein Rlf MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.6339 3 612.634261 1834.88095 78854.3 0.46642 0.00028575 0.1459 8.9384E-05 0.61232 0.00037513 612.968780373098 615.305897903877 28.492 0.32463 28.492 28.344 28.669 1.9073E-06 64 20 6 0 0 0 8.2262E-05 2 13463 45.438 39.797 1 0.79539 0.8219 0 11043000 5826500 5216100 32461 1705 12330 12673 50570;50571 50570 SPSDLWK 7 1 0 Unmodified _SPSDLWK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27;Q6W6M6 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 420.7205 2 416.713611 831.412668 92552.41 0.36198 0.00015084 0.056089 2.3373E-05 0.41807 0.00017422 416.713531753489 420.720710209689 46.497 0.97073 46.497 46 46.971 0 420 86 7 0 0 0 0.034246 1 24921 62.659 36.765 1 0.65111 0.75985 0 272000000 170620000 101390000 32462 1471;1679 12331 12674 50572 50572 SPSDLWK 7 1 0 Unmodified _SPSDLWK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27;Q6W6M6 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 420.7222 2 416.713611 831.412668 91747.51 0.31568 0.00013155 0.052103 2.1712E-05 0.36778 0.00015326 416.713497315124 420.720614526879 45.572 1.2993 45.572 44.956 46.255 0 528 112 8 0 0 0 0.029647 1 24834 69.998 39.813 1 0.65313 0.76536 0 318470000 192250000 126220000 32463 1471;1679 12331 12674 50573 50573 SPSDLWK 7 1 0 Unmodified _SPSDLWK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27;Q6W6M6 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 420.7206 2 416.713611 831.412668 92132.63 -0.36433 -0.00015182 0.47359 0.00019735 0.10926 4.553E-05 416.713717568686 420.720818095329 52.823 1.6502 52.823 52.227 53.878 0 662 126 8 0 0 0 0.060758 1 26359 50.127 19.941 1 1.3185 1.1135 0 57119000 24978000 32140000 32464 1471;1679 12331 12674 50574 50574 SPSDLWK 7 1 0 Unmodified _SPSDLWK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27;Q6W6M6 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 420.7207 2 416.713611 831.412668 92248.64 -0.48624 -0.00020262 0.57313 0.00023883 0.08689 3.6208E-05 416.713769763613 420.720855868146 53.019 1.7392 53.019 52.448 54.187 0 621 127 8 0 0 0 0.057145 1 25889 51.787 21.602 1 1.3161 1.0983 0 42165000 18219000 23947000 32465 1471;1679 12331 12674 50575 50575 SPSDSSTASTPVAEQIER 18 0 1 Unmodified _SPSDSSTASTPVAEQIER_ 0 0 0 Q16643;B3KSQ7;B7Z2Z0;D6R9Q9 Q16643 Q16643 DBN1 Drebrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 936.4469 2 931.442334 1860.87011 63476.07 0.45752 0.00042615 -0.041127 -3.8307E-05 0.41639 0.00038784 931.442422634003 936.446886474185 52.077 0.39299 52.077 51.899 52.292 0 113 30 5 0 0 0 1.6373E-11 1 28837 100.22 96.361 1 0.93946 0.98355 0 12692000 6525600 6166500 32466 1773 12332 12675 50576 50576 SPSDSSTASTPVAEQIER 18 0 1 Unmodified _SPSDSSTASTPVAEQIER_ 0 0 0 Q16643;B3KSQ7;B7Z2Z0;D6R9Q9 Q16643 Q16643 DBN1 Drebrin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 936.4517 2 931.442334 1860.87011 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.768 1 50.768 50.268 51.268 -3.8147E-06 0 0 0 9.1113E-05 1 28689 68.171 53.485 1 32467 1773 12332 12675 50577 50577 SPSDSSTASTPVAEQIER 18 0 1 Unmodified _SPSDSSTASTPVAEQIER_ 0 0 0 Q16643;B3KSQ7;B7Z2Z0;D6R9Q9 Q16643 Q16643 DBN1 Drebrin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.4424 2 931.442334 1860.87011 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.963 1 50.963 50.463 51.463 3.8147E-06 0 0 0 0.0014446 1 28833 55.724 42.296 1 32468 1773 12332 12675 50578 50578 SPSLLQSGAK 10 1 0 Unmodified _SPSLLQSGAK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.2845 2 494.277106 986.53966 87450.01 0.4317 0.00021338 0.36347 0.00017965 0.79516 0.00039303 494.277062878684 498.284358599051 35.618 1.0924 35.618 35.13 36.223 0 295 101 5 0 0 0 2.4698E-05 1 17879 99.802 83.329 1 0.94393 1.0295 0 50065000 24528000 25537000 32469 1997 12333 12676 50579 50579 SPSLLQSGAK 10 1 0 Unmodified _SPSLLQSGAK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.2777 2 494.277106 986.53966 NaN NaN NaN -0.21357 -0.00010556 NaN NaN NaN NaN 34.973 0.5882 34.973 34.677 35.265 0 0 0 0 4.2554E-08 1 17663 114.89 90.692 1 NaN NaN 0 37780000 37780000 0 32470 1997 12333 12676 50580 50580 SPSLLQSGAK 10 1 0 Unmodified _SPSLLQSGAK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.2775 2 494.277106 986.53966 84376.53 0.051508 2.5459E-05 0.68022 0.00033622 0.73173 0.00036168 494.277436352262 498.284353513369 40.098 0.63856 40.098 39.783 40.422 -3.8147E-06 220 49 6 0 0 0 0.041181 1 18309 38.303 38.303 1 0.9869 0.79058 0 8473700 4189600 4284100 32471 1997 12333 12676 50581 50581 SPSLLQSGAK 10 1 0 Unmodified _SPSLLQSGAK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.2837 2 494.277106 986.53966 85895.24 -0.063302 -3.1289E-05 0.74911 0.00037027 0.68581 0.00033898 494.277419605588 498.284387121216 40.075 0.71257 40.075 39.657 40.37 0 259 60 6 0 0 0 0.0091807 2 17830 55.064 45.476 1 0.94722 0.77238 0 7733600 3770500 3963100 32472 1997 12333 12676 50582;50583 50583 SPSPAPAPAPAAAAGPPTR 19 0 1 Unmodified _SPSPAPAPAPAAAAGPPTR_ 0 0 0 A0A024QZH6;Q9H7N4 A0A024QZH6 A0A024QZH6 SR-A1;SCAF1 Splicing factor, arginine/serine-rich 19 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.444 2 842.444286 1682.87402 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.18 1 47.18 46.68 47.68 0 0 0 0 0.052241 1 26159 33.685 18.483 1 32473 22 12334 12677 50584 50584 SPSPYYSR 8 0 1 Unmodified _SPSPYYSR_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4;H7BXF3;Q549U1;Q13595 Q8N1H4;Q549U1 Q8N1H4 DKFZp686F18120;TRA2B;HSU53209;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.7312 2 478.727249 955.439946 87196.3 0.13944 6.6755E-05 0.069777 3.3404E-05 0.20922 0.00010016 478.727069421573 483.731181700585 23.034 0.50239 23.034 22.748 23.25 1.9073E-06 111 25 7 0 0 0 0.0064556 1 8972 87.181 45.954 1 1.5926 1.6533 0 20749000 9485400 11264000 32474 889;1716 12335 12678 50585 50585 SPSQYHDFAEK 11 1 0 Unmodified _SPSQYHDFAEK_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.7976 2 654.796392 1307.57823 72458.48 0.38468 0.00025189 -1.7134 -0.0011219 -1.3287 -0.00087004 654.797149223683 659.301458583633 23.195 0.3233 23.195 23.03 23.353 1.9073E-06 41 15 4 0 0 0 0.0084432 2 9189 50.791 41.375 1 0.77204 0.76286 0 9372000 4603300 4768700 32475 2100 12336 12679 50586;50587 50587 SPSTTYLHTPTPSEDAAIPSK 21 1 0 Unmodified _SPSTTYLHTPTPSEDAAIPSK_ 0 0 0 D6W625;Q13111 D6W625 D6W625 CHAF1A Chromatin assembly factor 1 subunit A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.3657 3 734.030457 2199.06954 71165.86 0.66853 0.00049072 0.20246 0.00014861 0.87098 0.00063933 734.365163947193 736.701842069133 68.127 0.33276 68.127 67.925 68.258 0 105 27 5 0 0 0 0.013903 1 40405 20.737 17.499 1 0.9596 0.97607 0 12531000 5938900 6592400 32476 1204 12337 12680 50588 50588 SPTLYGISHDDLK 13 1 0 Unmodified _SPTLYGISHDDLK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.3726 2 723.367181 1444.71981 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.219 1 63.219 62.719 63.719 3.8147E-06 0 0 0 0.0015018 1 36310 72.652 35.461 1 32477 1411 12338 12681 50589 50589 SPTLYGISHDDLK 13 1 0 Unmodified _SPTLYGISHDDLK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.3685 2 723.367181 1444.71981 72364.22 0.70839 0.00051243 0.37855 0.00027383 1.0869 0.00078626 723.367294109751 727.37459551088 73.128 0.45744 73.128 72.902 73.359 0 142 28 7 0 0 0 0.0026637 1 38600 52.837 52.837 1 0.97083 0.76815 0 5038700 2432700 2606000 32478 1411 12338 12681 50590 50590 SPTWFGIPR 9 0 1 Unmodified _SPTWFGIPR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7816 2 530.782359 1059.55016 85390.4 0.68021 0.00036104 0.22444 0.00011913 0.90465 0.00048017 530.782274568946 535.786315569674 96.678 0.57919 96.678 96.435 97.014 0 103 48 4 0 0 0 0.0028653 1 58859 73.248 58.097 1 0.95719 1.0009 0 13063000 6393800 6669300 32479 789 12339 12682 50591 50591 SPTWFGIPR 9 0 1 Unmodified _SPTWFGIPR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7824 2 530.782359 1059.55016 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.665 1 95.665 95.165 96.165 0 0 0 0 0.0046449 1 59580 82.241 39.844 1 32480 789 12339 12682 50592 50592 SPVEVAQDVLAAVGK 15 1 0 Unmodified _SPVEVAQDVLAAVGK_ 0 0 0 J3KRS1;A0A0C4DGQ8;Q6IAN0 J3KRS1 J3KRS1 DHRS7B Dehydrogenase/reductase SDR family member 7B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.9189 2 741.911756 1481.80896 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.29 1 119.29 118.79 119.79 0 0 0 0 0.0012506 1 78627 73.632 41.026 1 32481 516 12340 12683 50593 50593 SPVFSDEDSDLDFDISK 17 1 0 Unmodified _SPVFSDEDSDLDFDISK_ 0 0 0 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 962.4669 2 958.425818 1914.83708 65181.52 0.59562 0.00057085 0.40918 0.00039217 1.0048 0.00096302 958.927512262892 962.935121059378 106.06 0.4319 106.06 105.89 106.32 0 86 30 4 0 0 0 0.0074919 1 65705 48.659 48.659 1 2.1423 2.1951 0 10580000 3475200 7105100 32482 924 12341 12684 50594 50594 SPWCYTTDPR 10 0 1 Unmodified _SPWCYTTDPR_ 0 0 0 CON__P06868;A0A0F7G8J1 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.7796 2 641.779687 1281.54482 NaN NaN NaN 0.020764 1.3326E-05 NaN NaN NaN NaN 63.515 0.65921 63.515 63.203 63.862 0 0 0 0 1.3364E-07 1 32599 107.57 107.57 1 NaN NaN 0 5507400 5507400 0 + 32483 1157 12342 12685 50595 50595 SPWCYTTDPR 10 0 1 Unmodified _SPWCYTTDPR_ 0 0 0 CON__P06868;A0A0F7G8J1 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.7797 2 641.779687 1281.54482 NaN NaN NaN -0.049215 -3.1585E-05 NaN NaN NaN NaN 64.07 0.75051 64.07 63.796 64.546 0 0 0 0 1.4577E-07 1 32239 106.6 93.562 1 NaN NaN 0 3948100 3948100 0 + 32484 1157 12342 12685 50596 50596 SPYLFSCGEDK 11 1 0 Unmodified _SPYLFSCGEDK_ 0 0 0 O43660;H0YA24 O43660 O43660 PLRG1 Pleiotropic regulator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.7949 2 651.787178 1301.5598 74518.07 0.71295 0.00046469 -0.065517 -4.2703E-05 0.64743 0.00042199 651.787514997572 655.794159673447 61.834 0.35463 61.834 61.653 62.007 3.8147E-06 65 28 4 0 0 0 0.030186 1 35436 38.804 37.31 1 1.6541 1.6718 0 5609300 1732100 3877200 32485 1386 12343 12686 50597 50597 SPYQEFTDHLVK 12 1 0 Unmodified _SPYQEFTDHLVK_ 0 0 0 P15880;Q8N5L9;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.3631 2 732.361899 1462.70924 69510.37 0.41265 0.00030221 0.032662 2.392E-05 0.44531 0.00032613 732.361821317856 736.368938316233 74.67 0.95532 74.67 74.327 75.282 0 432 77 9 0 0 0 1.1232E-17 2 43733 138.63 108.96 1 1.0123 1.1425 0 79098000 38315000 40783000 32486 1485;1930 12344 12687 50598;50599 50599 SPYQEFTDHLVK 12 1 0 Unmodified _SPYQEFTDHLVK_ 0 0 0 P15880;Q8N5L9;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.5763 3 488.577025 1462.70924 85454.95 -0.038648 -1.8883E-05 -0.37629 -0.00018385 -0.41494 -0.00020273 488.576728346036 491.248267940289 74.628 1.2155 74.628 74.212 75.427 7.6294E-06 669 98 11 0 0 0 7.4584E-05 1 43679 59.116 57.528 1 1.0483 1.2388 0 390930000 184940000 205990000 32487 1485;1930 12344 12687 50600 50600 SPYQEFTDHLVK 12 1 0 Unmodified _SPYQEFTDHLVK_ 0 0 0 P15880;Q8N5L9;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.369 2 732.361899 1462.70924 70042.87 0.86068 0.00063033 0.15217 0.00011144 1.0128 0.00074177 732.361941019731 736.368688619544 73.119 0.99059 73.119 72.799 73.789 0 343 82 8 0 0 0 1.4926E-12 2 43765 128.08 95.666 1 1.059 1.1883 0 114860000 57427000 57437000 32488 1485;1930 12344 12687 50601;50602 50602 SPYQEFTDHLVK 12 1 0 Unmodified _SPYQEFTDHLVK_ 0 0 0 P15880;Q8N5L9;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.3699 2 732.361899 1462.70924 70391.79 0.58496 0.00042841 -0.24023 -0.00017593 0.34474 0.00025247 732.361731653088 736.368734670309 85.271 0.88914 85.271 84.92 85.809 0 374 57 9 0 0 0 0.022837 2 46461 37.681 37.681 1 0.91506 0.74254 0 26524000 13621000 12903000 32489 1485;1930 12344 12687 50603;50604 50603 SPYQEFTDHLVK 12 1 0 Unmodified _SPYQEFTDHLVK_ 0 0 0 P15880;Q8N5L9;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 491.2485 3 488.577025 1462.70924 86044.66 0.185 9.0385E-05 -0.14552 -7.1096E-05 0.03948 1.9289E-05 488.577013984799 491.248293701531 85.286 1.2014 85.286 84.859 86.061 0 541 76 10 0 0 0 0.0014993 1 46546 54.871 44.819 1 0.85932 0.73809 0 84098000 43770000 40329000 32490 1485;1930 12344 12687 50605 50605 SPYQEFTDHLVK 12 1 0 Unmodified _SPYQEFTDHLVK_ 0 0 0 P15880;Q8N5L9;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 736.3682 2 732.361899 1462.70924 70490.46 0.68651 0.00050277 0.0054147 3.9655E-06 0.69192 0.00050674 732.361861348639 736.368823211873 85.416 0.99847 85.416 84.985 85.984 0 382 62 9 0 0 0 0.00087998 2 45723 64.439 54.207 1 0.87597 0.71718 0 26916000 15076000 11839000 32491 1485;1930 12344 12687 50606;50607 50607 SPYQEFTDHLVK 12 1 0 Unmodified _SPYQEFTDHLVK_ 0 0 0 P15880;Q8N5L9;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.2488 3 488.577025 1462.70924 86165.2 0.34044 0.00016633 -0.073023 -3.5677E-05 0.26742 0.00013065 488.577058985162 491.248320598836 85.396 1.4273 85.396 84.935 86.363 0 548 85 11 0 0 0 0.0016477 1 45789 40.093 40.093 1 0.8697 0.73932 0 76970000 40397000 36573000 32492 1485;1930 12344 12687 50608 50608 SPYTVTVGQACNPSACR 17 0 1 Unmodified _SPYTVTVGQACNPSACR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 939.4317 2 934.42491 1866.83527 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.288 1 55.288 54.788 55.788 0 0 0 0 0.00022233 1 31076 76.073 64.54 1 32493 1504 12345 12688 50609 50609 SPYTVTVGQACNPSACR 17 0 1 Unmodified _SPYTVTVGQACNPSACR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 934.4252 2 934.42491 1866.83527 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.352 1 55.352 54.852 55.852 3.8147E-06 0 0 0 0.0053095 1 31115 50.562 41.833 1 32494 1504 12345 12688 50610 50610 SPYTVTVGQACNPSACR 17 0 1 Unmodified _SPYTVTVGQACNPSACR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 939.4294 2 934.42491 1866.83527 64820.21 0.80227 0.00074966 0.11753 0.00010982 0.9198 0.00085948 934.926834058524 939.930581484862 54.412 0.31877 54.412 54.261 54.579 0 81 24 6 0 0 0 7.1332E-13 3 31070 120.87 112.17 1 1.2421 1.238 0 8934900 4600900 4334000 32495 1504 12345 12688 50611;50612;50613 50612 SQAASILTK 9 1 0 Unmodified _SQAASILTK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.7662 2 459.766374 917.518196 89527.88 0.12795 5.8828E-05 -0.0037101 -1.7058E-06 0.12424 5.7122E-05 459.7663520711 463.773408613367 34.19 1.0495 34.19 33.804 34.854 0 372 92 6 0 0 0 0.0056063 1 16969 66.299 58.819 1 0.91 1.0288 0 145330000 78323000 67006000 32496 69 12346 12689 50614 50614 SQAASILTK 9 1 0 Unmodified _SQAASILTK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.7664 2 459.766374 917.518196 90029.96 0.17974 8.2641E-05 -0.12668 -5.8243E-05 0.053066 2.4398E-05 459.766333715997 463.773300182519 33.668 1.0238 33.668 33.217 34.241 0 399 82 7 0 0 0 0.0062323 1 16760 64.711 43.411 1 0.83352 0.95089 0 153150000 85330000 67819000 32497 69 12346 12689 50615 50615 SQAASILTK 9 1 0 Unmodified _SQAASILTK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 463.7733 2 459.766374 917.518196 91087.44 -0.1407 -6.4687E-05 0.12937 5.9481E-05 -0.011324 -5.2062E-06 459.766480959474 463.773376991921 38.91 1.3702 38.91 38.233 39.603 0 440 104 6 0 0 0 0.032534 1 17114 45.022 37.091 1 1.6581 1.3279 0 20425000 7446900 12978000 32498 69 12346 12689 50616 50616 SQACEPSEPEIEIK 14 1 0 Unmodified _SQACEPSEPEIEIK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 808.8779 2 808.877253 1615.73995 67069.79 0.64631 0.00052278 -0.29319 -0.00023715 0.35312 0.00028563 808.877484154554 812.884757792024 64.274 0.52883 64.274 64.034 64.563 0 214 44 6 0 0 0 0.00013865 3 36819 78.692 78.692 1 0.5692 0.58794 0 12771000 7899700 4871300 32499 222 12347 12690 50617;50618;50619 50618 SQACEPSEPEIEIK 14 1 0 Unmodified _SQACEPSEPEIEIK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2;B3KVA0 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.8865 2 808.877253 1615.73995 64795.63 0.47562 0.00038472 -0.72684 -0.00058793 -0.25122 -0.00020321 808.878046506582 812.884412015767 63.243 0.57944 63.243 62.905 63.485 3.8147E-06 201 47 8 0 0 0 0.00017756 2 37050 72.531 58.722 1 0.64871 0.6721 0 18726000 11122000 7604200 32500 222 12347 12690 50620;50621 50621 SQAFIEMETR 10 0 1 Oxidation (M) _SQAFIEM(ox)ETR_ SQAFIEM(1)ETR SQAFIEM(57.35)ETR 0 1 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;Q9H4N1 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.7941 2 614.287345 1226.56014 76499.94 0.34832 0.00021397 0.20541 0.00012618 0.55373 0.00034015 614.287996515473 619.291505359465 39.787 0.59164 39.787 39.484 40.075 0 214 49 6 0 0 0 0.0036339 1 20580 57.348 51.567 1 2.3738 2.5793 0 50445000 17592000 32852000 32501 542 12348 12691 50622 50622 399 SQAFIEMETR 10 0 1 Oxidation (M) _SQAFIEM(ox)ETR_ SQAFIEM(1)ETR SQAFIEM(62.3)ETR 0 1 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;Q9H4N1 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.2867 2 614.287345 1226.56014 77319 0.14505 8.9105E-05 0.51913 0.0003189 0.66419 0.000408 614.287958257 619.291733598559 38.784 0.60597 38.784 38.487 39.093 0 238 52 7 0 0 0 0.0019013 2 20359 62.303 62.303 1 2.1122 2.443 0 68501000 25593000 42908000 32502 542 12348 12691 50623;50624 50624 399 SQAFIEMETR 10 0 1 Oxidation (M) _SQAFIEM(ox)ETR_ SQAFIEM(1)ETR SQAFIEM(53.68)ETR 0 1 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;Q9H4N1 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.288 2 614.287345 1226.56014 78108.41 0.64304 0.00039501 -0.067864 -4.1688E-05 0.57517 0.00035332 614.28776097118 619.291338943697 45.442 0.51118 45.442 45.177 45.688 0 117 33 6 0 0 0 0.0049399 1 21225 53.683 53.683 1 0.53483 0.4695 0 2512500 1553500 959020 32503 542 12348 12691 50625 50625 399 SQALLFIK 8 1 0 Unmodified _SQALLFIK_ 0 0 0 A0A087WUE9;Q4LE61;B7Z6F7;A0A024R0R6;Q92797 A0A087WUE9 A0A087WUE9 SYMPK;SYMPK variant protein Symplekin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.294 2 460.284203 918.553853 79149.3 0.48507 0.00022327 2.1073 0.00096998 2.5924 0.0011932 460.285224711993 464.292188822409 85.944 0.11006 85.944 85.892 86.002 0 18 7 4 0 0 0 0.019774 1 52987 58.917 39.071 1 1.0128 1.0295 0 9158000 4528400 4629600 32504 56 12349 12692 50626 50626 SQAPLESSLDSLGDVFLDSGR 21 0 1 Unmodified _SQAPLESSLDSLGDVFLDSGR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1102.5442 2 1097.03713 2192.05971 63962.28 0.72576 0.00079619 -0.23923 -0.00026244 0.48653 0.00053375 1098.03880315392 1102.04224081555 129.83 0.46039 129.83 129.57 130.03 0 71 24 6 0 0 0 1.8526E-05 4 84705 47.545 36.44 1 1.2778 1.3314 0 5160400 2433500 2726900 32505 186;1747 12350 12693 50627;50628;50629;50630 50629 SQAPLESSLDSLGDVFLDSGRK 22 1 1 Unmodified _SQAPLESSLDSLGDVFLDSGRK_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.7346 3 774.392166 2320.15467 68487.25 0.88093 0.00068219 -0.024053 -1.8626E-05 0.85688 0.00066356 774.726515156777 780.734036203827 120.17 0.56051 120.17 119.88 120.44 0 169 38 6 0 0 0 1.583E-07 2 77380 52.483 52.483 1 0.91092 1.0146 0 20059000 10219000 9840700 32506 186;1747 12351 12694 50631;50632 50632 SQAPLESSLDSLGDVFLDSGRK 22 1 1 Unmodified _SQAPLESSLDSLGDVFLDSGRK_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.4005 3 774.392166 2320.15467 69169.25 0.7881 0.0006103 0.042107 3.2607E-05 0.8302 0.0006429 774.726594134261 780.399614591964 119.58 0.55881 119.58 119.29 119.85 -7.6294E-06 263 40 9 0 0 0 2.7113E-10 2 78805 86.625 86.625 1 1.1201 1.2859 0 24686000 11893000 12793000 32507 186;1747 12351 12694 50633;50634 50634 SQAPLESSLDSLGDVFLDSGRK 22 1 1 Unmodified _SQAPLESSLDSLGDVFLDSGRK_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 780.7349 3 774.392166 2320.15467 68243.02 1.2673 0.00098136 -0.50034 -0.00038746 0.76693 0.0005939 774.725955421384 780.733761484325 132.56 0.77376 132.56 132.25 133.03 0 217 35 10 0 0 0 3.085E-08 2 80778 61.524 61.524 1 1.5448 1.3531 0 27627000 9907100 17720000 32508 186;1747 12351 12694 50635;50636 50636 SQAPLESSLDSLGDVFLDSGRK 22 1 1 Unmodified _SQAPLESSLDSLGDVFLDSGRK_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.4003 3 774.392166 2320.15467 68738.16 1.2677 0.00098171 -0.60816 -0.00047095 0.65956 0.00051076 774.72583136541 780.399269920254 132.37 0.7131 132.37 131.99 132.7 0 175 31 8 0 0 0 9.7942E-06 2 79413 43.233 43.233 1 1.7259 1.4664 0 26852000 9896600 16956000 32509 186;1747 12351 12694 50637;50638 50637 SQASTTVDINTQVEK 15 1 0 Unmodified _SQASTTVDINTQVEK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.9091 2 810.907399 1619.80024 68675.66 1.0221 0.00082884 -0.16171 -0.00013113 0.8604 0.00069771 811.408922534211 815.415365884975 49.428 0.31719 49.428 49.218 49.535 -3.8147E-06 86 20 7 0 0 0 1.1414E-38 3 27106 170.66 154.79 1 0.85238 0.83549 0 20915000 11452000 9462500 32510 1738 12352 12695 50639;50640;50641 50640 SQASTTVDINTQVEK 15 1 0 Unmodified _SQASTTVDINTQVEK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.4084 2 810.907399 1619.80024 68847.02 0.87383 0.0007086 -0.13834 -0.00011218 0.73549 0.00059642 810.907489893536 815.41510869062 48.366 0.52526 48.366 48.152 48.678 0 103 37 5 0 0 0 0.00022504 2 26950 71.548 59.335 1 1.1159 1.1692 0 10744000 5892900 4851300 32511 1738 12352 12695 50642;50643 50642 SQASTTVDINTQVEK 15 1 0 Unmodified _SQASTTVDINTQVEK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.9184 2 810.907399 1619.80024 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.206 1 48.206 47.706 48.706 3.8147E-06 0 0 0 0.053528 1 26937 38.799 29.61 1 32512 1738 12352 12695 50644 50644 SQASTTVDINTQVEK 15 1 0 Unmodified _SQASTTVDINTQVEK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.41 2 810.907399 1619.80024 67685.77 0.66503 0.00053927 -0.16697 -0.00013539 0.49806 0.00040388 810.907440837363 814.9142700972 57.567 0.49539 57.567 57.313 57.808 0 151 35 7 0 0 0 0.0025807 1 29134 44.511 44.511 1 1.2713 1.0205 0 2853200 1207200 1646100 32513 1738 12352 12695 50645 50645 SQASTTVDINTQVEK 15 1 0 Unmodified _SQASTTVDINTQVEK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 815.4179 2 810.907399 1619.80024 66426.49 0.58688 0.0004759 -0.65949 -0.00053479 -0.072614 -5.8883E-05 811.407266337902 814.91409900891 58.123 0.51786 58.123 57.866 58.384 3.8147E-06 181 31 8 0 0 0 0.0011051 2 28812 48.704 43.594 1 1.2791 1.0229 0 4146700 1853500 2293300 32514 1738 12352 12695 50646;50647 50646 SQDFGNLFSFPSYSQK 16 1 0 Unmodified _SQDFGNLFSFPSYSQK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 930.4376 2 926.431041 1850.84753 63944.27 0.79946 0.00074064 -0.14677 -0.00013597 0.65268 0.00060467 926.43078344092 930.437946713186 116.22 0.58919 116.22 115.95 116.54 0 240 37 8 0 0 0 3.2197E-10 1 74066 112.51 106.66 1 0.60076 0.66155 0 55271000 34203000 21068000 32515 1679 12353 12696 50648 50648 SQDFGNLFSFPSYSQK 16 1 0 Unmodified _SQDFGNLFSFPSYSQK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.4312 2 926.431041 1850.84753 63962.89 0.82067 0.0007603 0.0065917 6.1067E-06 0.82727 0.00076641 926.431126563137 930.438067840399 115.66 0.65405 115.66 115.42 116.08 0 245 42 9 0 0 0 2.6002E-06 2 75402 91.858 85.625 1 0.60808 0.68627 0 64571000 38702000 25869000 32516 1679 12353 12696 50649;50650 50649 SQDFGNLFSFPSYSQK 16 1 0 Unmodified _SQDFGNLFSFPSYSQK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 926.4312 2 926.431041 1850.84753 63168.66 0.78388 0.00072621 0.1273 0.00011793 0.91118 0.00084414 926.932592798109 930.438233220392 127.65 0.78 127.65 127.26 128.04 0 189 30 10 0 0 0 0.00035016 2 76863 52.891 52.891 1 1.2099 0.99182 0 36446000 16406000 20039000 32517 1679 12353 12696 50651;50652 50652 SQDFGNLFSFPSYSQK 16 1 0 Unmodified _SQDFGNLFSFPSYSQK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 930.4395 2 926.431041 1850.84753 63341.37 0.58093 0.00053819 0.22042 0.00020421 0.80135 0.0007424 926.431269778011 930.438220106489 127.49 0.65783 127.49 127.19 127.84 0 189 26 10 0 0 0 0.0001534 2 75830 67.964 62.47 1 1.1902 0.98695 0 35288000 16516000 18772000 32518 1679 12353 12696 50653;50654 50653 SQDIYLR 7 0 1 Unmodified _SQDIYLR_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;F8VYV2;B4DDY5;A0A075B7A0;F8VXR6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.7376 2 447.737617 893.460681 90683.33 -0.027474 -1.2301E-05 -0.043048 -1.9274E-05 -0.070522 -3.1575E-05 447.737565530575 452.741642815695 39.828 1.1852 39.828 39.337 40.523 0 464 100 7 0 0 0 0.023524 1 20738 90.986 28.271 1 0.96028 1.1191 0 190720000 103930000 86790000 32519 16 12354 12697 50655 50655 SQDIYLR 7 0 1 Unmodified _SQDIYLR_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;F8VYV2;B4DDY5;A0A075B7A0;F8VXR6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.738 2 447.737617 893.460681 90325.92 -0.081132 -3.6326E-05 0.20043 8.9741E-05 0.1193 5.3415E-05 447.737663322252 452.741712790693 38.751 1.2088 38.751 38.353 39.562 0 546 104 9 0 0 0 0.032276 2 20323 65.803 19.14 1 0.89261 1.0358 0 328240000 175820000 152420000 32520 16 12354 12697 50656;50657 50657 SQDLESVQEVGGSYWQR 17 0 1 Unmodified _SQDLESVQEVGGSYWQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 989.4631 2 984.458318 1966.90208 60920.13 0.17575 0.00017302 0.49288 0.00048522 0.66863 0.00065823 984.960305202324 989.964480800241 86.106 0.78722 86.106 85.724 86.511 0 363 63 8 0 0 0 5.8429E-25 4 51658 155.98 155.98 1 0.86014 0.91797 0 44296000 25528000 18768000 32521 897 12355 12698 50658;50659;50660;50661 50661 SQDLESVQEVGGSYWQR 17 0 1 Unmodified _SQDLESVQEVGGSYWQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.9643 2 984.458318 1966.90208 60804.92 0.2264 0.00022289 -0.19057 -0.00018761 0.035836 3.5279E-05 984.960400472107 989.462162579219 85.377 0.77921 85.377 85.052 85.831 -7.6294E-06 329 61 8 0 0 0 1.0259E-06 4 52358 110.38 110.38 1 0.81436 0.9067 0 43632000 25845000 17787000 32522 897 12355 12698 50662;50663;50664;50665 50662 SQDLESVQEVGGSYWQR 17 0 1 Unmodified _SQDLESVQEVGGSYWQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 989.9647 2 984.458318 1966.90208 59371.14 0.28577 0.00028133 0.76325 0.00075139 1.049 0.0010327 984.459929029568 989.461985028 98.66 0.99138 98.66 98.091 99.082 -7.6294E-06 346 53 10 0 0 0 8.9112E-10 3 55683 126.71 126.71 1 0.86772 0.7188 0 20103000 9879600 10223000 32523 897 12355 12698 50666;50667;50668 50667 SQDLESVQEVGGSYWQR 17 0 1 Unmodified _SQDLESVQEVGGSYWQR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 989.4633 2 984.458318 1966.90208 60654.68 0.27927 0.00027493 0.90716 0.00089306 1.1864 0.001168 984.459844301162 989.462150991382 98.664 1.0737 98.664 98.099 99.173 0 365 64 10 0 0 0 3.1229E-45 2 54847 170.26 149.01 1 0.97363 0.82472 0 18482000 9225500 9256700 32524 897 12355 12698 50669;50670 50670 SQDVELWEGEVVK 13 1 0 Unmodified _SQDVELWEGEVVK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.8864 2 759.377746 1516.74094 NaN NaN NaN 0.11014 8.3637E-05 NaN NaN NaN NaN 90.743 0.63064 90.743 90.433 91.064 0 0 0 0 0.006038 1 54682 55.452 45.765 1 NaN NaN 0 30051000 0 30051000 32525 1010 12356 12699 50671 50671 SQDVELWEGEVVK 13 1 0 Unmodified _SQDVELWEGEVVK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.3786 2 759.377746 1516.74094 67426.95 0.66412 0.00050432 0.10367 7.8725E-05 0.76779 0.00058304 759.879521983392 763.384437571815 89.807 0.55329 89.807 89.581 90.134 0 197 47 6 0 0 0 1.3684E-05 3 55465 99.752 90.264 1 1.9842 2.1991 0 47078000 13116000 33962000 32526 1010 12356 12699 50672;50673;50674 50673 SQDVELWEGEVVK 13 1 0 Unmodified _SQDVELWEGEVVK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.3847 2 759.377746 1516.74094 70386.68 0.62334 0.00047335 -0.17985 -0.00013658 0.44349 0.00033677 759.876806052839 763.384717106029 103.78 0.84996 103.78 103.43 104.28 0 262 56 7 0 0 0 0.0025619 1 58887 53.252 39.094 1 4.3969 3.4882 0 10213000 1529300 8683800 32527 1010 12356 12699 50675 50675 SQDVELWEGEVVK 13 1 0 Unmodified _SQDVELWEGEVVK_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.384 2 759.377746 1516.74094 69821.05 0.48974 0.0003719 -0.0098073 -7.4475E-06 0.47993 0.00036445 759.876712048646 763.384891242277 103.77 0.88499 103.77 103.32 104.2 0 196 59 5 0 0 0 0.00013573 1 57962 73.624 59.466 1 3.8053 3.0964 0 7153100 1354500 5798600 32528 1010 12356 12699 50676 50676 SQEDTEAVFK 10 1 0 Unmodified _SQEDTEAVFK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.2717 2 577.272218 1152.52988 79065.39 0.63346 0.00036568 -0.2543 -0.0001468 0.37916 0.00021888 577.271907085547 581.27919023815 39.305 0.69769 39.305 38.92 39.618 0 250 56 6 0 0 0 0.0010607 3 20245 76.827 49.573 1 0.97718 1.0737 0 54034000 27372000 26662000 32529 925 12357 12700 50677;50678;50679 50678 SQEDTEAVFK 10 1 0 Unmodified _SQEDTEAVFK_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.272 2 577.272218 1152.52988 79205.35 0.57519 0.00033204 -0.31311 -0.00018075 0.26208 0.00015129 577.271965342457 581.279182137815 38.33 0.63752 38.33 38.045 38.683 -3.8147E-06 234 53 9 0 0 0 0.00015294 2 20078 95.608 90.624 1 0.97368 1.0908 0 111540000 55558000 55983000 32530 925 12357 12700 50680;50681 50681 SQEDTEAVFKK 11 2 0 Unmodified _SQEDTEAVFKK_ 0 0 1 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.2243 3 427.882225 1280.62485 92410.02 -0.13499 -5.7762E-05 -0.15721 -6.7268E-05 -0.29221 -0.00012503 427.882236239365 433.224531894937 25.83 0.26979 25.83 25.654 25.923 0 74 14 7 0 0 0 0.0043091 1 11345 45.433 38.735 1 0.88916 1.052 0 30689000 14594000 16095000 32531 925 12358 12701 50682 50682 SQEDTEAVFKK 11 2 0 Unmodified _SQEDTEAVFKK_ 0 0 1 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.2251 3 427.882225 1280.62485 90362.09 0.38197 0.00016344 0.041356 1.7696E-05 0.42332 0.00018113 427.8822270173 433.224925684739 25.436 0.28492 25.436 25.28 25.565 1.9073E-06 51 11 7 0 0 0 0.0079633 1 11059 37.995 32.896 1 0.9896 1.1434 0 32129000 15341000 16787000 32532 925 12358 12701 50683 50683 SQEDTEAVFKK 11 2 0 Unmodified _SQEDTEAVFKK_ 0 0 1 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3221 2 641.319699 1280.62485 NaN NaN NaN 0.64294 0.00041233 NaN NaN NaN NaN 25.431 0.26072 25.431 25.304 25.565 0 0 0 0 0.050372 1 11132 44.425 28.222 1 NaN NaN 0 19077000 19077000 0 32533 925 12358 12701 50684 50684 SQEIFLNLK 9 1 0 Unmodified _SQEIFLNLK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.3091 2 546.308406 1090.60226 86754.05 0.96652 0.00052802 0.51206 0.00027974 1.4786 0.00080776 546.30847696508 550.31527696062 87.833 0.37748 87.833 87.554 87.932 0 83 26 5 0 0 0 0.0038088 1 54159 70.856 52.453 1 0.87914 0.90893 0 24946000 14230000 10716000 32534 264 12359 12702 50685 50685 SQFEELCAELLQK 13 1 0 Unmodified _SQFEELCAELLQK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.8994 2 797.892706 1593.77086 69804.48 0.84119 0.00067118 0.050519 4.0309E-05 0.89171 0.00071149 798.394456685201 801.899672268136 106.81 0.39177 106.81 106.64 107.04 7.6294E-06 53 29 4 0 0 0 0.00020025 2 66467 70.488 46.638 1 1.2358 1.2339 0 7817500 3646000 4171500 32535 390 12360 12703 50686;50687 50687 SQFEELCAELLQK 13 1 0 Unmodified _SQFEELCAELLQK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.8993 2 797.892706 1593.77086 NaN NaN NaN -0.75005 -0.00059846 NaN NaN NaN NaN 106.15 0.23466 106.15 105.96 106.19 7.6294E-06 0 0 0 0.004177 1 67559 62.408 46.154 1 NaN NaN 0 4448500 0 4448500 32536 390 12360 12703 50688 50688 SQFEELCAELLQK 13 1 0 Unmodified _SQFEELCAELLQK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.3998 2 797.892706 1593.77086 NaN NaN NaN 1.1625 0.00092755 NaN NaN NaN NaN 106.26 0.226 106.26 106.17 106.4 -7.6294E-06 0 0 0 0.0039093 1 67621 63.408 48.718 1 NaN NaN 0 3905200 0 3905200 32537 390 12360 12703 50689 50689 SQFYFLTK 8 1 0 Unmodified _SQFYFLTK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.2715 2 517.271293 1032.52803 84528.7 0.47537 0.0002459 0.093089 4.8152E-05 0.56846 0.00029405 517.271341932161 521.278382247021 85.878 0.65486 85.878 85.531 86.185 0 227 55 6 0 0 0 0.0010029 1 51638 117.72 88.347 1 0.90876 1.0251 0 111620000 58293000 53331000 32538 716 12361 12704 50690 50690 SQFYFLTK 8 1 0 Unmodified _SQFYFLTK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.2715 2 517.271293 1032.52803 83594.82 0.38974 0.0002016 0.16803 8.6915E-05 0.55776 0.00028852 517.27128568201 521.278303546775 84.73 0.71148 84.73 84.425 85.137 0 284 60 8 0 0 0 0.011482 2 52038 69.825 59.914 1 0.87688 1.0182 0 226390000 112860000 113530000 32539 716 12361 12704 50691;50692 50692 SQFYFLTK 8 1 0 Unmodified _SQFYFLTK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.2711 2 517.271293 1032.52803 84737.63 0.37194 0.00019239 0.021628 1.1187E-05 0.39356 0.00020358 517.271246365752 521.278300043091 97.975 0.90185 97.975 97.647 98.549 7.6294E-06 240 59 6 0 0 0 0.0087985 1 55218 77.072 62.914 1 1.3048 1.0175 0 15849000 7078300 8770600 32540 716 12361 12704 50693 50693 SQFYFLTK 8 1 0 Unmodified _SQFYFLTK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.2714 2 517.271293 1032.52803 84611.45 0.27535 0.00014243 0.4543 0.00023499 0.72964 0.00037742 517.271473782839 521.278543709497 97.876 0.84173 97.876 97.484 98.326 0 200 50 5 0 0 0 0.016729 1 54254 60.91 46.753 1 1.2721 1.0224 0 13918000 5868900 8049300 32541 716 12361 12704 50694 50694 SQGCSEQVLTVLK 13 1 0 Unmodified _SQGCSEQVLTVLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.8744 2 724.874316 1447.73408 72099.86 0.56292 0.00040805 0.089327 6.4751E-05 0.65225 0.0004728 724.874582758996 728.881445538516 77.952 0.5994 77.952 77.649 78.248 0 204 47 7 0 0 0 1.6073E-09 2 45986 123.67 102.3 1 0.63904 0.68804 0 40716000 24822000 15894000 32542 1665 12362 12705 50695;50696 50696 SQGCSEQVLTVLK 13 1 0 Unmodified _SQGCSEQVLTVLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.8828 2 724.874316 1447.73408 72295.31 0.4549 0.00032974 0.40925 0.00029665 0.86415 0.0006264 724.874779641582 728.881734494916 76.863 0.67265 76.863 76.527 77.2 0 247 51 7 0 0 0 9.3162E-06 2 46352 100.93 84.678 1 0.60809 0.67477 0 48548000 28764000 19785000 32543 1665 12362 12705 50697;50698 50698 SQGCSEQVLTVLK 13 1 0 Unmodified _SQGCSEQVLTVLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.8818 2 724.874316 1447.73408 71504.62 0.78464 0.00056877 -0.18338 -0.00013293 0.60126 0.00043584 724.874391457136 728.881143331532 89.458 0.87706 89.458 89.045 89.923 0 307 55 8 0 0 0 0.01888 2 49373 36 27.046 1 0.33595 0.26084 0 14643000 10883000 3759500 32544 1665 12362 12705 50699;50700 50700 SQGCSEQVLTVLK 13 1 0 Unmodified _SQGCSEQVLTVLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 728.8823 2 724.874316 1447.73408 71224.29 0.41461 0.00030054 0.2088 0.00015135 0.62341 0.00045189 724.874555520541 728.88144241885 89.388 0.92274 89.388 88.975 89.897 0 280 52 8 0 0 0 0.00014499 3 48484 83.182 68.503 1 0.33192 0.26785 0 13602000 10120000 3482000 32545 1665 12362 12705 50701;50702;50703 50702 SQGGVQPIPSQGGK 14 1 0 Unmodified _SQGGVQPIPSQGGK_ 0 0 0 Q9NZB2 Q9NZB2 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.3605 2 670.351865 1338.68918 NaN NaN NaN -0.13817 -9.2623E-05 NaN NaN NaN NaN 27.659 0.11628 27.659 27.553 27.669 -1.9073E-06 0 0 0 0.0024866 1 12784 65.5 49.303 1 NaN NaN 0 2453000 0 2453000 32546 2086 12363 12706 50704 50704 SQGLSQLYHNQSQGLLSQLQGQSK 24 1 0 Unmodified _SQGLSQLYHNQSQGLLSQLQGQSK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;Q2TU89 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.7852 3 877.115807 2628.32559 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.265 1 94.265 93.765 94.765 0 0 0 0 0.0083322 1 57251 43.523 36.677 1 32547 1054 12364 12707 50705 50705 SQGNDILCLSLPDKPPPQPQQWNVR 25 1 1 Unmodified _SQGNDILCLSLPDKPPPQPQQWNVR_ 0 0 1 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 969.5003 3 963.155497 2886.44466 61882.25 0.10048 9.6777E-05 0.62274 0.0005998 0.72322 0.00069657 963.490419989349 969.498052396296 120 0.44 120 119.79 120.23 0 136 19 11 0 0 0 5.1573E-12 2 71097 65.213 65.213 1 1.8562 1.5783 0 9061200 2708800 6352400 32548 1565 12365 12708 50706;50707 50706 SQGNDILCLSLPDKPPPQPQQWNVR 25 1 1 Unmodified _SQGNDILCLSLPDKPPPQPQQWNVR_ 0 0 1 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 969.498 3 963.155497 2886.44466 61549.09 0.22336 0.00021513 0.35498 0.0003419 0.57833 0.00055702 963.489767137919 969.497566405582 119.76 0.44938 119.76 119.54 119.98 0 128 19 10 0 0 0 3.0018E-16 2 70028 93.093 90.461 1 1.8318 1.5499 0 11381000 3806500 7574900 32549 1565 12365 12708 50708;50709 50708 SQHDILQMICSK 12 1 0 Oxidation (M) _SQHDILQM(ox)ICSK_ SQHDILQM(1)ICSK SQHDILQM(63.19)ICSK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2425 3 492.570888 1474.69083 85231.62 0.3111 0.00015324 -0.47955 -0.00023621 -0.16845 -8.2973E-05 492.570875002241 495.24201274289 54.265 0.61521 54.265 53.889 54.505 0 227 49 7 0 0 0 0.00024436 1 30321 63.185 60.974 1 2.2067 2.4272 0 54647000 14753000 39894000 32550 1569;1864 12366 12709 50710 50710 1343 SQHDILQMICSK 12 1 0 Oxidation (M) _SQHDILQM(ox)ICSK_ SQHDILQM(1)ICSK SQHDILQM(100.19)ICSK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.36 2 738.352693 1474.69083 NaN NaN NaN 0.42807 0.00031607 NaN NaN NaN NaN 54.004 0.39157 54.004 53.956 54.348 0 0 0 0 7.6821E-06 1 30386 100.19 72.858 1 NaN NaN 0 7652200 0 7652200 32551 1569;1864 12366 12709 50711 50711 1343 SQHDILQMICSK 12 1 0 Oxidation (M) _SQHDILQM(ox)ICSK_ SQHDILQM(1)ICSK SQHDILQM(40.55)ICSK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2423 3 492.570888 1474.69083 85428.3 0.34157 0.00016825 -0.38492 -0.0001896 -0.043356 -2.1356E-05 492.570857970191 495.242020093246 52.639 0.88337 52.639 52.178 53.062 0 343 69 6 0 0 0 0.0047524 1 29957 40.552 35.751 1 2.1139 2.3614 0 52956000 15409000 37547000 32552 1569;1864 12366 12709 50712 50712 1343 SQHDILQMICSK 12 1 0 Oxidation (M) _SQHDILQM(ox)ICSK_ SQHDILQM(1)ICSK SQHDILQM(62.09)ICSK 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.3605 2 738.352693 1474.69083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.5 1 52.5 52 53 0 0 0 0 0.0029329 1 29937 62.088 36.429 1 32553 1569;1864 12366 12709 50713 50713 1343 SQIFSTASDNQPTVTIK 17 1 0 Unmodified _SQIFSTASDNQPTVTIK_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.9803 2 918.97053 1835.92651 63377.25 0.59345 0.00054536 0.17221 0.00015825 0.76566 0.00070361 918.970685011463 922.977985888269 80.594 0.47618 80.594 80.321 80.797 0 236 41 8 0 0 0 5.0149E-09 3 47813 103.83 81.779 1 0.78062 0.82239 0 30747000 17051000 13696000 32554 1466 12367 12710 50714;50715;50716 50716 SQIFSTASDNQPTVTIK 17 1 0 Unmodified _SQIFSTASDNQPTVTIK_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 922.9793 2 918.97053 1835.92651 63268.46 0.82501 0.00075816 -0.08709 -8.0033E-05 0.73792 0.00067812 919.471888301977 923.478997132429 79.589 0.48778 79.589 79.362 79.85 0 230 38 8 0 0 0 1.7058E-05 4 48260 84.297 55.394 1 0.77951 0.81682 0 34624000 20705000 13919000 32555 1466 12367 12710 50717;50718;50719;50720 50718 SQIFSTASDNQPTVTIK 17 1 0 Unmodified _SQIFSTASDNQPTVTIK_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 919.4738 2 918.97053 1835.92651 63694.08 0.52505 0.00048251 0.12531 0.00011516 0.65036 0.00059767 918.970743939785 922.977935092254 92.519 0.54738 92.519 92.266 92.814 0 168 26 9 0 0 0 0.00097069 2 51433 44.132 33.902 1 0.56495 0.44813 0 10230000 6500700 3729300 32556 1466 12367 12710 50721;50722 50721 SQIFSTASDNQPTVTIK 17 1 0 Unmodified _SQIFSTASDNQPTVTIK_ 0 0 0 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 922.9784 2 918.97053 1835.92651 63598.58 0.222 0.00020401 -0.013737 -1.2624E-05 0.20826 0.00019139 918.970501104357 922.977896179927 92.359 0.61751 92.359 92.072 92.69 -7.6294E-06 185 30 9 0 0 0 7.4241E-05 2 50542 66.533 53.655 1 0.50729 0.4155 0 8615400 5719300 2896100 32557 1466 12367 12710 50723;50724 50724 SQIHDIVLVGGSTR 14 0 1 Unmodified _SQIHDIVLVGGSTR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.9436 3 494.607207 1480.79979 85535.56 0.29865 0.00014772 0.33354 0.00016497 0.63219 0.00031269 494.607314611667 497.943388330983 64.094 2.0718 64.094 62.587 64.659 0 838 196 6 0 0 0 0.00044778 5 36483 43.297 37.418 1 1.3865 1.5415 0 74884000 28924000 45960000 32558 1467;1248 12368 12711 50725;50726;50727;50728;50729 50727 SQIHDIVLVGGSTR 14 0 1 Unmodified _SQIHDIVLVGGSTR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.4149 2 741.407172 1480.79979 NaN NaN NaN 1.4679 0.0010883 NaN NaN NaN NaN 63.947 0.29325 63.947 63.833 64.127 -3.8147E-06 0 0 0 0.0020618 1 36666 66.989 59.063 1 NaN NaN 0 9060700 0 9060700 32559 1467;1248 12368 12711 50730 50730 SQIHDIVLVGGSTR 14 0 1 Unmodified _SQIHDIVLVGGSTR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.4112 2 741.407172 1480.79979 70531.02 0.46318 0.00034341 0.020373 1.5105E-05 0.48355 0.00035851 741.406790145703 746.411915835151 60.904 0.4758 60.904 60.605 61.08 0 94 43 4 0 0 0 0.00018215 1 35530 71.879 71.879 1 1.2219 1.2817 0 22869000 9258800 13611000 32560 1467;1248 12368 12711 50731 50731 SQIHDIVLVGGSTR 14 0 1 Unmodified _SQIHDIVLVGGSTR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.6078 3 494.607207 1480.79979 86065.78 0.22907 0.0001133 0.27063 0.00013386 0.4997 0.00024715 494.607206356406 497.943458607647 61.501 1.1654 61.501 61.019 62.184 -3.8147E-06 516 108 8 0 0 0 7.5568E-05 2 35958 62.861 62.861 1 1.3589 1.5506 0 93259000 36484000 56775000 32561 1467;1248 12368 12711 50732;50733 50732 SQIHDIVLVGGSTR 14 0 1 Unmodified _SQIHDIVLVGGSTR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 741.4067 2 741.407172 1480.79979 NaN NaN NaN 0.26516 0.00019659 NaN NaN NaN NaN 60.788 0.18538 60.788 60.663 60.848 0 0 0 0 0.00029252 1 35547 81.494 63.685 1 NaN NaN 0 9474900 9474900 0 32562 1467;1248 12368 12711 50734 50734 SQIHDIVLVGGSTR 14 0 1 Unmodified _SQIHDIVLVGGSTR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.6074 3 494.607207 1480.79979 84311.55 0.10014 4.9532E-05 -0.028313 -1.4004E-05 0.071831 3.5528E-05 494.607167191746 497.94327362591 71.892 0.89472 71.892 71.599 72.493 0 352 70 8 0 0 0 0.0015778 2 37920 44.294 44.294 1 1.3771 1.1737 0 36417000 13904000 22514000 32563 1467;1248 12368 12711 50735;50736 50736 SQIHDIVLVGGSTR 14 0 1 Unmodified _SQIHDIVLVGGSTR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.4081 2 741.407172 1480.79979 NaN NaN NaN -0.40939 -0.00030353 NaN NaN NaN NaN 71.878 0.41512 71.878 71.694 72.109 7.6294E-06 0 0 0 0.0048825 1 37888 57.106 45.574 1 NaN NaN 0 3967300 3967300 0 32564 1467;1248 12368 12711 50737 50737 SQIHDIVLVGGSTR 14 0 1 Unmodified _SQIHDIVLVGGSTR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 741.4066 2 741.407172 1480.79979 70454.3 0.29837 0.00022122 0.65505 0.00048566 0.95343 0.00070688 741.407212194356 746.411967042365 72.155 0.50338 72.155 71.911 72.414 0 158 40 7 0 0 0 0.0093951 2 37263 46.481 40.636 1 1.278 1.0372 0 10129000 3956600 6172700 32565 1467;1248 12368 12711 50738;50739 50739 SQIHDIVLVGGSTR 14 0 1 Unmodified _SQIHDIVLVGGSTR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.6073 3 494.607207 1480.79979 85805.44 -0.17022 -8.4194E-05 0.35995 0.00017803 0.18973 9.384E-05 494.607340959529 497.943462680336 72.143 0.85471 72.143 71.717 72.572 0 336 67 8 0 0 0 8.2586E-05 2 37329 62.044 62.044 1 1.3552 1.1822 0 26460000 11027000 15432000 32566 1467;1248 12368 12711 50740;50741 50741 SQIPLSK 7 1 0 Unmodified _SQIPLSK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 386.7312 2 386.731803 771.449054 96849.35 0.40892 0.00015814 -0.33128 -0.00012812 0.077636 3.0024E-05 386.731585937561 390.73871614611 30.391 0.50638 30.391 30.189 30.696 -1.9073E-06 150 44 7 0 0 0 0.028805 2 14802 71.342 17.138 1 0.37107 0.42191 0 165770000 123970000 41800000 32567 1476 12369 12712 50742;50743 50742 SQIPLSK 7 1 0 Unmodified _SQIPLSK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 386.732 2 386.731803 771.449054 95963.68 1.0863 0.00042011 0.0060181 2.3274E-06 1.0923 0.00042244 386.731739361481 390.738842405058 29.828 0.41336 29.828 29.666 30.079 0 120 30 8 0 0 0 0.01154 2 14481 108.09 37.372 1 0.37209 0.43093 0 209970000 148180000 61781000 32568 1476 12369 12712 50744;50745 50745 SQISVYSELNK 11 1 0 Unmodified _SQISVYSELNK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.2859 2 634.330067 1266.64558 76009.62 0.58306 0.00036985 0.12102 7.6764E-05 0.70407 0.00044661 634.329868157756 638.337245623611 64.214 0.90644 64.214 63.824 64.73 0 445 81 9 0 0 0 0.045762 1 36789 56.202 46.052 1 0.96337 1.0862 0 112860000 57997000 54868000 32569 2042 12370 12713 50746 50746 SQISVYSELNK 11 1 0 Unmodified _SQISVYSELNK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3304 2 634.330067 1266.64558 75740.41 0.40062 0.00025412 0.09083 5.7616E-05 0.49145 0.00031174 634.329849807126 638.337176970917 63.034 0.99487 63.034 62.49 63.485 0 496 85 9 0 0 0 0.00025057 2 37101 105.98 85.105 1 1.0417 1.1694 0 75977000 40387000 35590000 32570 2042 12370 12713 50747;50748 50748 SQISVYSELNK 11 1 0 Unmodified _SQISVYSELNK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.3372 2 634.330067 1266.64558 76247.15 0.63172 0.00040072 0.10636 6.7466E-05 0.73808 0.00046818 634.329575984597 638.336886289147 74.313 1.2481 74.313 73.798 75.046 -7.6294E-06 399 85 9 0 0 0 5.8219E-05 1 39374 98.943 82.105 1 1.2501 0.98152 0 16985000 7703800 9281000 32571 2042 12370 12713 50749 50749 SQISVYSELNK 11 1 0 Unmodified _SQISVYSELNK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.3374 2 634.330067 1266.64558 75694.53 0.51027 0.00032368 0.75213 0.0004771 1.2624 0.00080078 634.329584127477 638.337014452694 74.707 0.89755 74.707 74.278 75.175 0 300 53 10 0 0 0 0.00022651 2 38774 91.656 66.443 1 1.2242 0.98353 0 15996000 7295900 8699600 32572 2042 12370 12713 50750;50751 50750 SQKEEDEQEDLTK 13 2 0 Unmodified _SQKEEDEQEDLTK_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.8597 2 789.860114 1577.70568 NaN NaN NaN -0.19137 -0.00015116 NaN NaN NaN NaN 17.709 0.21427 17.709 17.594 17.808 0 0 0 0 0.046841 1 4859 64.55 41.633 1 NaN NaN 0 2270200 2270200 0 32573 1798 12371 12714 50752 50752 SQLDIIIHSLK 11 1 0 Unmodified _SQLDIIIHSLK_ 0 0 0 P13010;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.9187 3 422.918722 1265.73434 92709.52 0.10103 4.2728E-05 -0.18816 -7.9575E-05 -0.087125 -3.6847E-05 422.918610025744 425.590038022656 99.387 1.252 99.387 98.671 99.923 0 350 102 7 0 0 0 0.00061706 3 60925 63.164 54.056 1 0.37733 0.42669 0 103910000 90029000 13881000 32574 1476 12372 12715 50753;50754;50755 50755 SQLDIIIHSLK 11 1 0 Unmodified _SQLDIIIHSLK_ 0 0 0 P13010;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8745 2 633.874445 1265.73434 76362.44 0.47258 0.00029956 0.18 0.0001141 0.65258 0.00041365 633.874355197682 638.383394976103 99.526 1.3175 99.526 98.721 100.04 0 305 108 6 0 0 0 0.0079252 1 61182 61.344 48.307 1 0.30486 0.34517 0 100260000 89146000 11116000 32575 1476 12372 12715 50756 50756 SQLDIIIHSLK 11 1 0 Unmodified _SQLDIIIHSLK_ 0 0 0 P13010;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8828 2 633.874445 1265.73434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.982 1 98.982 98.482 99.482 0 0 0 0 0.00082384 1 60559 70.412 54.53 1 32576 1476 12372 12715 50757 50757 SQLDIIIHSLK 11 1 0 Unmodified _SQLDIIIHSLK_ 0 0 0 P13010;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8817 2 633.874445 1265.73434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.757 1 99.757 99.257 100.26 0 0 0 0 0.0046375 1 61106 65.5 50.35 1 32577 1476 12372 12715 50758 50758 SQLDIIIHSLK 11 1 0 Unmodified _SQLDIIIHSLK_ 0 0 0 P13010;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.9184 3 422.918722 1265.73434 92475.86 0.10327 4.3676E-05 0.0064697 2.7361E-06 0.10974 4.6412E-05 422.918671550521 425.590096900162 98.114 1.2326 98.114 97.481 98.713 0 454 102 6 0 0 0 0.0018737 3 61500 55.04 45.197 1 0.37464 0.42436 0 136320000 96077000 40248000 32578 1476 12372 12715 50759;50760;50761 50761 SQLDIIIHSLK 11 1 0 Unmodified _SQLDIIIHSLK_ 0 0 0 P13010;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8739 2 633.874445 1265.73434 76508.23 0.62755 0.00039779 0.13202 8.3683E-05 0.75957 0.00048147 633.874211608725 637.881568199211 98.098 1.1972 98.098 97.481 98.678 -7.6294E-06 510 99 7 0 0 0 0.00043756 3 61042 93.839 79.145 1 0.34171 0.38192 0 98048000 75629000 22420000 32579 1476 12372 12715 50762;50763;50764 50763 SQLDIIIHSLK 11 1 0 Unmodified _SQLDIIIHSLK_ 0 0 0 P13010;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.8749 2 633.874445 1265.73434 76254.03 0.76348 0.00048395 0.32327 0.00020492 1.0868 0.00068887 633.874568123048 637.881698196832 111.15 0.82185 111.15 110.82 111.64 0 179 37 9 0 0 0 0.0061818 2 64279 66.56 60.639 1 0.28872 0.23804 0 41523000 31936000 9587100 32580 1476 12372 12715 50765;50766 50766 SQLDIIIHSLK 11 1 0 Unmodified _SQLDIIIHSLK_ 0 0 0 P13010;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 425.5898 3 422.918722 1265.73434 92050.88 -0.022682 -9.5928E-06 0.2891 0.00012226 0.26641 0.00011267 422.918814333842 425.590250729609 111.15 0.728 111.15 110.89 111.62 0 163 33 9 0 0 0 0.01426 1 64298 35.204 35.204 1 0.32745 0.26767 0 34149000 26569000 7579700 32581 1476 12372 12715 50767 50767 SQLDIIIHSLK 11 1 0 Unmodified _SQLDIIIHSLK_ 0 0 0 P13010;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.8815 2 633.874445 1265.73434 77315.85 0.71482 0.00045311 0.097146 6.1578E-05 0.81197 0.00051469 633.874415589501 637.881595466974 110.91 0.65948 110.91 110.64 111.3 0 208 32 9 0 0 0 0.006554 1 63156 67.214 63.721 1 0.29318 0.24896 0 71849000 54049000 17800000 32582 1476 12372 12715 50768 50768 SQLDIIIHSLKK 12 2 0 Unmodified _SQLDIIIHSLKK_ 0 0 1 P13010;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 465.6186 3 465.617043 1393.8293 88275.67 0.45222 0.00021056 0.34859 0.00016231 0.80081 0.00037287 465.617223251076 470.960217432702 95.39 0.43381 95.39 95.209 95.642 0 95 30 5 0 0 0 0.0052521 1 53455 39.006 38.408 1 0.3673 0.31778 0 3885800 2775800 1110000 32583 1476 12373 12716 50769 50769 SQLELLISPTCSCK 14 1 0 Unmodified _SQLELLISPTCSCK_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 818.4097 2 818.407666 1634.80078 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.42 1 110.42 109.92 110.92 -7.6294E-06 0 0 0 0.023775 1 63797 43.991 29.115 1 32584 1270 12374 12717 50770 50770 SQLLGSAHEVQR 12 0 1 Unmodified _SQLLGSAHEVQR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.8529 2 662.852032 1323.68951 74878.76 0.53756 0.00035632 -0.078346 -5.1932E-05 0.45921 0.00030439 662.852087016555 667.856030002212 27.862 0.24096 27.862 27.706 27.947 -1.9073E-06 62 13 7 0 0 0 5.7572E-19 2 13078 149.96 128.5 1 1.2485 1.3655 0 30579000 14488000 16091000 32585 523 12375 12718 50771;50772 50772 SQLLGSAHEVQR 12 0 1 Unmodified _SQLLGSAHEVQR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 445.5731 3 442.237114 1323.68951 90940.28 -0.22718 -0.00010047 -0.0066685 -2.949E-06 -0.23385 -0.00010342 442.237169226857 445.573168683928 32.525 0.28281 32.525 32.378 32.661 0 59 12 7 0 0 0 0.059718 1 14080 20.009 20.009 1 3.0068 2.5174 0 3955400 819300 3136100 32586 523 12375 12718 50773 50773 SQLLGSAHEVQR 12 0 1 Unmodified _SQLLGSAHEVQR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.8569 2 662.852032 1323.68951 NaN NaN NaN -0.075808 -5.0249E-05 NaN NaN NaN NaN 32.521 0.28281 32.521 32.378 32.661 0 0 0 0 0.035782 1 14022 45.433 27.624 1 NaN NaN 0 3257400 0 3257400 32587 523 12375 12718 50774 50774 SQLLGSAHEVQR 12 0 1 Unmodified _SQLLGSAHEVQR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.8569 2 662.852032 1323.68951 75323.85 0.54814 0.00036334 -0.020372 -1.3503E-05 0.52777 0.00034983 663.353694769938 667.856070168688 32.571 0.2568 32.571 32.418 32.675 0 53 12 6 0 0 0 0.0019484 1 13571 59.84 59.84 1 3.1931 2.7144 0 3129600 694500 2435100 32588 523 12375 12718 50775 50775 SQLLGSAHEVQR 12 0 1 Unmodified _SQLLGSAHEVQR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;B4DGT1 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 445.5735 3 442.237114 1323.68951 NaN NaN NaN -0.064307 -2.8439E-05 NaN NaN NaN NaN 32.581 0.2967 32.581 32.418 32.715 0 0 0 0 0.039691 1 13562 32.275 21.014 1 NaN NaN 0 1838300 0 1838300 32589 523 12375 12718 50776 50776 SQLLQYVYNLVPR 13 0 1 Unmodified _SQLLQYVYNLVPR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RG31 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.9493 2 796.94339 1591.87223 68595.81 0.72607 0.00057864 0.26707 0.00021284 0.99314 0.00079148 796.943724806372 801.94764456329 128.39 0.65817 128.39 128.14 128.79 0 224 43 8 0 0 0 6.3966E-05 2 83623 95.573 95.573 1 1.0845 1.1272 0 22220000 9745500 12475000 32590 235 12376 12719 50777;50778 50777 SQLLQYVYNLVPR 13 0 1 Unmodified _SQLLQYVYNLVPR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RG31 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.4482 2 796.94339 1591.87223 69042.67 1.1409 0.00090923 0.10004 7.9727E-05 1.2409 0.00098896 796.943511171764 801.94744612642 128.02 0.61591 128.02 127.78 128.4 0 222 38 9 0 0 0 0.0030923 1 85390 51.092 51.092 1 1.0559 1.1511 0 29488000 14815000 14673000 32591 235 12376 12719 50779 50779 SQLLSYIDR 9 0 1 Unmodified _SQLLSYIDR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.8004 2 547.795663 1093.57677 81917.27 0.66445 0.00036398 -0.23731 -0.00013 0.42714 0.00023398 547.795513793568 552.799619962516 81.171 0.60942 81.171 80.839 81.449 0 243 52 6 0 0 0 0.00026447 2 49489 104.2 78.261 1 1.1285 1.2341 0 35007000 16696000 18311000 32592 560 12377 12720 50780;50781 50780 SQLLSYIDR 9 0 1 Unmodified _SQLLSYIDR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.7959 2 547.795663 1093.57677 82606.84 0.58273 0.00031922 -0.15102 -8.2727E-05 0.43171 0.00023649 547.795587736356 552.799676061829 94.312 0.48788 94.312 94.069 94.557 0 116 29 5 0 0 0 0.027097 1 52714 47.198 37.61 1 0.81629 0.68258 0 3732600 2042900 1689700 32593 560 12377 12720 50782 50782 SQLLSYIDR 9 0 1 Unmodified _SQLLSYIDR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 552.7995 2 547.795663 1093.57677 84165.53 0.68791 0.00037683 -0.03913 -2.1435E-05 0.64878 0.0003554 547.795706590143 552.79965849708 94.192 0.56783 94.192 93.934 94.502 0 151 35 7 0 0 0 0.046824 2 51786 39.305 27.862 1 0.70567 0.60399 0 2859600 1662800 1196800 32594 560 12377 12720 50783;50784 50784 SQLNCLLLSGR 11 0 1 Unmodified _SQLNCLLLSGR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.841 2 630.840079 1259.66561 79115.59 0.86285 0.00054432 -0.53815 -0.00033948 0.32471 0.00020484 630.840386126645 635.843293374665 85.459 0.48869 85.459 85.248 85.737 0 171 40 7 0 0 0 2.8993E-10 2 51273 133.42 133.42 1 0.64784 0.6832 0 40194000 23294000 16900000 32595 1859 12378 12721 50785;50786 50785 SQLNCLLLSGR 11 0 1 Unmodified _SQLNCLLLSGR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8415 2 630.840079 1259.66561 NaN NaN NaN 0.23421 0.00014775 NaN NaN NaN NaN 84.386 0.44044 84.386 84.212 84.653 0 0 0 0 0.0015593 1 51749 82.417 50.097 1 NaN NaN 0 23588000 23588000 0 32596 1859 12378 12721 50787 50787 SQLNCLLLSGR 11 0 1 Unmodified _SQLNCLLLSGR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.8402 2 630.840079 1259.66561 76027.06 0.54319 0.00034267 -0.58007 -0.00036593 -0.036873 -2.3261E-05 630.839989867412 635.843712808839 97.98 0.46257 97.98 97.748 98.21 0 193 32 8 0 0 0 0.0040722 2 55129 58.676 58.676 1 1.1172 0.93485 0 10269000 4199900 6069600 32597 1859 12378 12721 50788;50789 50788 SQLNCLLLSGR 11 0 1 Unmodified _SQLNCLLLSGR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.8405 2 630.840079 1259.66561 75895.16 0.58067 0.00036631 -0.11158 -7.0392E-05 0.46909 0.00029592 630.84024599127 635.844042139342 97.84 0.48286 97.84 97.616 98.099 0 142 29 6 0 0 0 0.0045381 2 54232 57.836 57.836 1 1.1098 0.92113 0 7726800 3570700 4156000 32598 1859 12378 12721 50790;50791 50791 SQMDGLIPGVEPR 13 0 1 Oxidation (M) _SQM(ox)DGLIPGVEPR_ SQM(1)DGLIPGVEPR SQM(140.14)DGLIPGVEPR 0 1 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.8531 2 707.853383 1413.69221 72148.01 0.79816 0.00056498 -0.66569 -0.00047121 0.13246 9.3765E-05 707.85317126941 712.857637736204 76.339 1.1447 76.339 75.709 76.854 0 483 94 9 0 0 0 5.8702E-19 2 44841 140.14 119.84 1 1.0848 1.2346 0 114640000 55519000 59119000 32599 2129 12379 12722 50792;50793 50792 1961 SQMDGLIPGVEPR 13 0 1 Oxidation (M) _SQM(ox)DGLIPGVEPR_ SQM(1)DGLIPGVEPR SQM(103.43)DGLIPGVEPR 0 1 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.8583 2 707.853383 1413.69221 71921 0.52642 0.00037262 -0.38085 -0.00026959 0.14556 0.00010304 707.853202986709 712.857701666981 75.332 1.2189 75.332 74.586 75.805 0 492 109 7 0 0 0 3.5552E-06 2 45261 103.43 89.737 1 1.0986 1.2514 0 105970000 47139000 58832000 32600 2129 12379 12722 50794;50795 50795 1961 SQMDGLIPGVEPR 13 0 1 Oxidation (M) _SQM(ox)DGLIPGVEPR_ SQM(1)DGLIPGVEPR SQM(89.19)DGLIPGVEPR 0 1 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.8578 2 707.853383 1413.69221 70376.3 0.61687 0.00043665 -0.52826 -0.00037393 0.088606 6.272E-05 707.853301587224 712.85775033733 86.586 1.337 86.586 85.944 87.281 0 352 85 7 0 0 0 6.821E-05 2 47441 89.189 71.753 1 0.63773 0.52001 0 15019000 9267500 5751500 32601 2129 12379 12722 50796;50797 50797 1961 SQMDGLIPGVEPR 13 0 1 Oxidation (M) _SQM(ox)DGLIPGVEPR_ SQM(1)DGLIPGVEPR SQM(61.42)DGLIPGVEPR 0 1 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 707.8539 2 707.853383 1413.69221 71977.55 0.56907 0.00040282 -0.067099 -4.7497E-05 0.50197 0.00035532 707.853418447725 712.857884812672 86.772 1.2044 86.772 86.231 87.436 -7.6294E-06 357 73 8 0 0 0 0.00026959 3 46629 61.419 51.047 1 0.62536 0.504 0 11126000 7179600 3946300 32602 2129 12379 12722 50798;50799;50800 50799 1961 SQMDGLIPGVEPR 13 0 1 Oxidation (M) _SQM(ox)DGLIPGVEPR_ SQM(1)DGLIPGVEPR SQM(56.09)DGLIPGVEPR 0 1 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 707.8535 2 707.853383 1413.69221 72654.86 0.49908 0.00035328 0.37492 0.00026539 0.874 0.00061866 707.853400724407 712.858028961158 104.58 0.76109 104.58 104.23 104.99 0 205 43 6 0 0 0 0.00090394 2 58649 56.087 46.133 1 0.97663 0.84905 0 4287200 2172200 2115100 32603 2129 12379 12722 50801;50802 50801 1961 SQMDGLIPGVEPR 13 0 1 Unmodified _SQMDGLIPGVEPR_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.8585 2 699.855926 1397.6973 NaN NaN NaN -0.17819 -0.00012471 NaN NaN NaN NaN 91.616 0.3643 91.616 91.516 91.88 -7.6294E-06 0 0 0 0.0074552 1 55582 54.471 37.035 1 NaN NaN 0 6452200 6452200 0 32604 2129 12379 12723 50803 50803 SQMDGLIPGVEPR 13 0 1 Unmodified _SQMDGLIPGVEPR_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.8561 2 699.855926 1397.6973 71762.77 0.6454 0.00045169 -0.6406 -0.00044833 0.004806 3.3635E-06 699.855798040035 704.859959635964 104.73 0.8955 104.73 104.35 105.25 -7.6294E-06 288 52 8 0 0 0 0.0001142 2 59605 75.479 57.614 1 1.1243 0.9347 0 10840000 5500400 5339800 32605 2129 12379 12723 50804;50805 50805 SQMDGLIPGVEPR 13 0 1 Unmodified _SQMDGLIPGVEPR_ 0 0 0 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 699.8563 2 699.855926 1397.6973 71466.65 0.46066 0.00032239 -0.42703 -0.00029886 0.03362 2.3529E-05 699.855877548142 704.860111801152 104.61 0.82034 104.61 104.19 105.01 0 258 47 8 0 0 0 0.00032062 2 58625 64.64 54.269 1 1.0582 0.86334 0 12826000 6059400 6767000 32606 2129 12379 12723 50806;50807 50807 SQNEAVCEGLR 11 0 1 Unmodified _SQNEAVCEGLR_ 0 0 0 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.7979 2 631.793326 1261.5721 78451.93 0.34489 0.0002179 0.45859 0.00028973 0.80348 0.00050764 631.793604552362 636.797709230645 29.304 0.23238 29.304 29.19 29.422 0 49 16 4 0 0 0 1.2223E-05 1 14134 107.95 94.599 1 0.58183 0.59327 0 30530000 21345000 9184800 32607 353 12380 12724 50808 50808 SQNEAVCEGLR 11 0 1 Unmodified _SQNEAVCEGLR_ 0 0 0 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.7938 2 631.793326 1261.5721 NaN NaN NaN 0.12222 7.722E-05 NaN NaN NaN NaN 28.835 0.14924 28.835 28.759 28.908 0 0 0 0 7.803E-05 1 13802 95.573 70.436 1 NaN NaN 0 6004700 6004700 0 32608 353 12380 12724 50809 50809 SQNEAVCEGLR 11 0 1 Unmodified _SQNEAVCEGLR_ 0 0 0 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.2989 2 631.793326 1261.5721 74894.43 0.49481 0.00031262 -0.4124 -0.00026055 0.082405 5.2063E-05 631.793895140787 636.797129347652 33.369 0.27392 33.369 33.231 33.504 0 89 23 6 0 0 0 0.014428 1 14559 46.844 41.362 1 1.1637 1.0013 0 7549300 3510600 4038600 32609 353 12380 12724 50810 50810 SQNEAVCEGLR 11 0 1 Unmodified _SQNEAVCEGLR_ 0 0 0 A0A024RC67;O43663 A0A024RC67 A0A024RC67 PRC1 Protein regulator of cytokinesis 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.7972 2 631.793326 1261.5721 75479 0.49642 0.00031363 -0.32826 -0.00020739 0.16816 0.00010624 631.793925472734 636.79695815463 33.541 0.27589 33.541 33.391 33.666 0 93 21 6 0 0 0 0.014698 1 14172 46.706 37.793 1 1.076 0.89593 0 6236900 3140600 3096300 32610 353 12380 12724 50811 50811 SQNIVTDSSSLSAEAIR 17 0 1 Unmodified _SQNIVTDSSSLSAEAIR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.4539 2 889.449962 1776.88537 NaN NaN NaN 0.39721 0.0003533 NaN NaN NaN NaN 80.545 0.47884 80.545 80.332 80.811 0 0 0 0 6.87E-07 1 47803 86.944 62.958 1 NaN NaN 0 17617000 0 17617000 32611 415 12381 12725 50812 50812 SQNIVTDSSSLSAEAIR 17 0 1 Unmodified _SQNIVTDSSSLSAEAIR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.4565 2 889.449962 1776.88537 NaN NaN NaN 0.27417 0.00024386 NaN NaN NaN NaN 79.659 0.47712 79.659 79.373 79.85 0 0 0 0 4.1455E-09 1 48304 98.582 82.692 1 NaN NaN 0 13901000 0 13901000 32612 415 12381 12725 50813 50813 SQNIVTDSSSLSAEAIR 17 0 1 Unmodified _SQNIVTDSSSLSAEAIR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 894.9557 2 889.449962 1776.88537 NaN NaN NaN 0.43432 0.00038631 NaN NaN NaN NaN 92.739 0.61755 92.739 92.403 93.02 0 0 0 0 0.00049017 1 50766 65.092 41.856 1 NaN NaN 0 4388900 0 4388900 32613 415 12381 12725 50814 50814 SQNTELASTASLLR 14 0 1 Unmodified _SQNTELASTASLLR_ 0 0 0 P17535;U3KPR5 P17535 P17535 JUND Transcription factor jun-D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.3969 2 745.894094 1489.77364 70364.02 0.88325 0.00065881 1.9342 0.0014427 2.8175 0.0021015 745.894276092809 751.404529196206 82.759 0.67824 82.759 82.508 83.186 0 222 56 8 0 0 0 0.00024787 2 49373 62.528 51.711 1 0.76206 0.77954 0 35283000 18252000 17031000 32614 1492 12382 12726 50815;50816 50816 SQNTELASTASLLR 14 0 1 Unmodified _SQNTELASTASLLR_ 0 0 0 P17535;U3KPR5 P17535 P17535 JUND Transcription factor jun-D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.8954 2 745.894094 1489.77364 70551.71 0.90317 0.00067367 0.19462 0.00014517 1.0978 0.00081884 745.894119890556 750.898260293959 81.691 0.55432 81.691 81.449 82.003 -7.6294E-06 173 46 7 0 0 0 1.3567E-06 2 49872 108.68 108.68 1 0.58128 0.65701 0 47426000 28678000 18748000 32615 1492 12382 12726 50817;50818 50818 SQNTELASTASLLR 14 0 1 Unmodified _SQNTELASTASLLR_ 0 0 0 P17535;U3KPR5 P17535 P17535 JUND Transcription factor jun-D MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.8997 2 745.894094 1489.77364 68738.2 0.89308 0.00066614 -0.16706 -0.00012461 0.72602 0.00054153 745.894505801128 750.898320566284 95.222 0.50716 95.222 94.929 95.436 0 147 35 6 0 0 0 0.0031029 1 53249 47.712 47.712 1 0.8475 0.72954 0 7289600 3648200 3641300 32616 1492 12382 12726 50819 50819 SQNTELASTASLLR 14 0 1 Unmodified _SQNTELASTASLLR_ 0 0 0 P17535;U3KPR5 P17535 P17535 JUND Transcription factor jun-D MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 750.8984 2 745.894094 1489.77364 71511.95 0.53871 0.00040182 0.1435 0.00010703 0.68221 0.00050886 745.895417888545 750.898795361415 95.144 0.47437 95.144 94.861 95.336 0 146 33 6 0 0 0 0.005666 1 52381 43.382 43.382 1 0.88023 0.73124 0 5925500 2958300 2967200 32617 1492 12382 12726 50820 50820 SQPAASTLESK 11 1 0 Unmodified _SQPAASTLESK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.795 2 559.788035 1117.56152 80804.73 0.69348 0.0003882 0.11222 6.2821E-05 0.8057 0.00045102 559.787988517258 563.795073783071 22.476 0.43831 22.476 22.263 22.701 0 127 28 7 0 0 0 0.02235 1 8466 42.802 22.064 1 2.2379 2.42 0 36324000 11573000 24751000 32618 1569 12383 12727 50821 50821 SQPDPVDTPTSSK 13 1 0 Unmodified _SQPDPVDTPTSSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.8325 2 679.825346 1357.63614 72901.15 0.45846 0.00031167 0.10915 7.4206E-05 0.56761 0.00038588 679.825391119094 683.832507573357 25.83 0.64726 25.83 25.513 26.16 0 164 34 8 0 0 0 0.00015178 3 11273 84.882 84.882 1 1.7759 2.0402 0 201240000 75169000 126070000 32619 1569 12384 12728 50822;50823;50824 50822 SQPDPVDTPTSSK 13 1 0 Unmodified _SQPDPVDTPTSSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.8264 2 679.825346 1357.63614 73471.25 1.0673 0.0007256 0.23382 0.00015896 1.3012 0.00088456 679.825511331667 683.832552594047 25.499 0.51956 25.499 25.304 25.824 0 116 28 8 0 0 0 0.00011395 2 11064 75.416 75.416 1 1.7687 2.0608 0 250460000 89960000 160500000 32620 1569 12384 12728 50825;50826 50826 SQPDPVDTPTSSK 13 1 0 Unmodified _SQPDPVDTPTSSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 683.8326 2 679.825346 1357.63614 73140.32 0.46721 0.00031762 -0.02409 -1.6377E-05 0.44312 0.00030124 679.825036040781 683.832371109129 28.924 0.78524 28.924 28.465 29.251 -1.9073E-06 362 58 9 0 0 0 0.0059861 1 11532 46.706 46.706 1 3.4079 2.6853 0 17610000 3358200 14252000 32621 1569 12384 12728 50827 50827 SQPDPVDTPTSSK 13 1 0 Unmodified _SQPDPVDTPTSSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.8327 2 679.825346 1357.63614 73454.5 0.23991 0.0001631 0.13355 9.0791E-05 0.37346 0.00025389 679.825195074299 683.832524389843 29.142 0.74416 29.142 28.771 29.515 0 258 43 8 0 0 0 0.013135 2 11158 38.634 37.797 1 3.4778 2.7935 0 15455000 3763600 11692000 32622 1569 12384 12728 50828;50829 50828 SQPDPVDTPTSSKPQSK 17 2 0 Unmodified _SQPDPVDTPTSSKPQSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.4482 2 899.944512 1797.87447 64043.03 0.70306 0.00063271 -0.0037804 -3.4021E-06 0.69928 0.00062931 899.944266364968 907.958766583953 21.492 0.3781 21.492 21.352 21.73 0 113 21 8 0 0 0 0.00078509 2 7735 69.345 69.345 1 1.957 2.3106 0 44046000 12781000 31265000 32623 1569 12385 12729 50830;50831 50831 SQPDPVDTPTSSKPQSK 17 2 0 Unmodified _SQPDPVDTPTSSKPQSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.6414 3 600.298767 1797.87447 77784.63 0.70646 0.00042409 -0.48232 -0.00028953 0.22415 0.00013456 600.632831365112 605.641392555941 21.525 0.47966 21.525 21.282 21.762 0 129 26 7 0 0 0 3.1368E-05 1 7748 71.929 71.929 1 1.7754 2.0954 0 89730000 27460000 62269000 32624 1569 12385 12729 50832 50832 SQPDPVDTPTSSKPQSK 17 2 0 Unmodified _SQPDPVDTPTSSKPQSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.9449 2 899.944512 1797.87447 65021.34 0.39821 0.00035837 0.081838 7.3649E-05 0.48005 0.00043201 900.445914010495 907.958912311196 21.354 0.36378 21.354 21.203 21.567 0 85 15 7 0 0 0 0.00036472 2 7501 78.486 78.486 1 1.8464 2.135 0 36264000 10864000 25400000 32625 1569 12385 12729 50833;50834 50834 SQPDPVDTPTSSKPQSK 17 2 0 Unmodified _SQPDPVDTPTSSKPQSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 907.959 2 899.944512 1797.87447 63778.87 0.32005 0.00028803 -0.0033871 -3.0482E-06 0.31666 0.00028498 899.944583455125 907.958750014056 23.664 0.55188 23.664 23.438 23.99 1.9073E-06 172 28 10 0 0 0 0.00067016 1 8019 62.14 56.168 1 3.9453 3.3625 0 21703000 4153900 17549000 32626 1569 12385 12729 50835 50835 SQPDPVDTPTSSKPQSK 17 2 0 Unmodified _SQPDPVDTPTSSKPQSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.6409 3 600.298767 1797.87447 77382.08 0.43388 0.00026046 -0.42894 -0.00025749 0.0049353 2.9627E-06 600.633387184188 605.64142927302 23.678 0.91306 23.678 23.385 24.298 0 207 49 8 0 0 0 0.00021229 1 8187 47.726 43.411 1 3.7159 3.1466 0 75335000 13157000 62177000 32627 1569 12385 12729 50836 50836 SQPDPVDTPTSSKPQSK 17 2 0 Unmodified _SQPDPVDTPTSSKPQSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 907.9579 2 899.944512 1797.87447 64385.13 0.17667 0.00015899 0.079646 7.1677E-05 0.25632 0.00023067 900.446258801422 907.958862512533 23.714 0.65086 23.714 23.44 24.09 0 257 39 11 0 0 0 0.0069664 1 7549 54.7 54.7 1 3.649 3.0926 0 18346000 4043300 14303000 32628 1569 12385 12729 50837 50837 SQPDPVDTPTSSKPQSK 17 2 0 Unmodified _SQPDPVDTPTSSKPQSK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.6414 3 600.298767 1797.87447 77146.58 0.43316 0.00026002 -0.91013 -0.00054635 -0.47697 -0.00028633 600.299275860108 605.640791936755 23.734 0.81645 23.734 23.396 24.213 0 341 49 12 0 0 0 0.0058092 1 7794 30.107 30.107 1 3.5833 3.0565 0 54996000 12040000 42955000 32629 1569 12385 12729 50838 50838 SQPFVDHVFTFTILDNR 17 0 1 Unmodified _SQPFVDHVFTFTILDNR_ 0 0 0 Q8TDN6 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.6825 3 679.346052 2035.01633 73076.05 1.0142 0.00068896 0.46102 0.00031319 1.4752 0.0010022 679.680367192342 682.68228626425 119.05 1.117 119.05 118.63 119.75 0 474 70 11 0 0 0 2.1156E-09 2 76633 82.007 82.007 1 0.86435 0.9783 0 104780000 52824000 51952000 32630 1934 12386 12730 50839;50840 50840 SQPFVDHVFTFTILDNR 17 0 1 Unmodified _SQPFVDHVFTFTILDNR_ 0 0 0 Q8TDN6 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.6827 3 679.346052 2035.01633 72742.73 0.53722 0.00036496 0.65016 0.00044168 1.1874 0.00080664 679.680535552133 682.682456786573 118.38 0.94835 118.38 117.98 118.92 0 407 58 12 0 0 0 9.5676E-06 2 77964 63.145 63.145 1 0.8297 0.9443 0 127520000 72320000 55199000 32631 1934 12386 12730 50841;50842 50842 SQPFVDHVFTFTILDNR 17 0 1 Unmodified _SQPFVDHVFTFTILDNR_ 0 0 0 Q8TDN6 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.6804 3 679.346052 2035.01633 72805.59 0.6679 0.00045373 0.4138 0.00028112 1.0817 0.00073485 679.680743215055 682.682565934784 130.29 1.1524 130.29 129.94 131.1 0 312 54 11 0 0 0 8.646E-08 2 78838 79.97 79.97 1 1.2106 1.0447 0 81868000 35252000 46616000 32632 1934 12386 12730 50843;50844 50844 SQPFVDHVFTFTILDNR 17 0 1 Unmodified _SQPFVDHVFTFTILDNR_ 0 0 0 Q8TDN6 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1018.516 2 1018.51544 2035.01633 59223.75 0.41409 0.00042176 -0.82178 -0.00083699 -0.40769 -0.00041524 1019.01664314669 1024.02002176996 130.29 0.91673 130.29 129.83 130.75 0 254 45 10 0 0 0 0.00059187 1 79015 46.797 42.167 1 2.0743 1.7047 0 17520000 5477400 12043000 32633 1934 12386 12730 50845 50845 SQPFVDHVFTFTILDNR 17 0 1 Unmodified _SQPFVDHVFTFTILDNR_ 0 0 0 Q8TDN6 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.347 3 679.346052 2035.01633 73026.91 1.0505 0.00071367 0.19852 0.00013486 1.249 0.00084853 679.680587032775 683.016219363778 130.04 1.1693 130.04 129.55 130.72 0 232 45 11 0 0 0 9.269E-10 2 77776 94.882 94.882 1 1.2524 1.0932 0 88354000 38366000 49988000 32634 1934 12386 12730 50846;50847 50847 SQQCQGNELTRPSASSQEK 19 1 1 Unmodified _SQQCQGNELTRPSASSQEK_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 712.3319 3 712.330912 2133.97091 75531.05 0.73347 0.00052248 0.19139 0.00013633 0.92486 0.00065881 712.665063711966 718.672837176358 19.682 0.19881 19.682 19.588 19.787 0 41 14 5 0 0 0 1.761E-05 1 6226 55.437 50.727 1 0.45642 0.51957 0 4091600 2614500 1477100 32635 44 12387 12731 50848 50848 SQQCQGNELTRPSASSQEK 19 1 1 Unmodified _SQQCQGNELTRPSASSQEK_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.3309 3 712.330912 2133.97091 71512.09 0.5715 0.0004071 -0.23234 -0.00016551 0.33915 0.00024159 712.330895611676 718.672920643152 19.473 0.27593 19.473 19.364 19.64 0 68 12 9 0 0 0 4.6289E-06 2 5910 70.235 70.235 1 0.63587 0.70407 0 7994800 5490800 2504000 32636 44 12387 12731 50849;50850 50850 SQQCQGNELTRPSASSQEK 19 1 1 Unmodified _SQQCQGNELTRPSASSQEK_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.6732 3 712.330912 2133.97091 71876.78 0.26822 0.00019106 0.078216 5.5716E-05 0.34644 0.00024678 712.331083160786 718.338603738363 21.318 0.26767 21.318 21.207 21.475 0 59 9 9 0 0 0 1.4919E-05 1 6395 54.964 54.964 1 1.7351 1.4699 0 8384400 2130700 6253700 32637 44 12387 12731 50851 50851 SQQCQGNELTRPSASSQEK 19 1 1 Unmodified _SQQCQGNELTRPSASSQEK_ 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.3379 3 712.330912 2133.97091 70643.68 0.19373 0.000138 0.38656 0.00027536 0.58029 0.00041336 712.331096974085 718.338896249572 21.261 0.34985 21.261 21.076 21.426 0 91 16 9 0 0 0 1.0296E-05 1 5885 60.528 57.241 1 1.3576 1.1385 0 6325300 2728800 3596500 32638 44 12387 12731 50852 50852 SQQESWDLEEK 11 1 0 Unmodified _SQQESWDLEEK_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5;H0Y9E6 B3KVZ3 B3KVZ3 CENPH Centromere protein H ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8099 2 689.809696 1377.60484 NaN NaN NaN -0.097262 -6.7092E-05 NaN NaN NaN NaN 49.521 0.28144 49.521 49.387 49.669 -3.8147E-06 0 0 0 0.0002095 1 27235 92.239 68.017 1 NaN NaN 0 3654700 3654700 0 32639 585 12388 12732 50853 50853 SQQESWDLEEK 11 1 0 Unmodified _SQQESWDLEEK_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5;H0Y9E6 B3KVZ3 B3KVZ3 CENPH Centromere protein H MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.8099 2 689.809696 1377.60484 75129.17 0.54835 0.00037826 -0.46847 -0.00032315 0.079883 5.5104E-05 689.809476320663 693.816297174192 57.183 0.34406 57.183 56.996 57.34 -3.8147E-06 93 25 5 0 0 0 0.026688 1 28953 40.589 40.589 1 1.0313 0.83103 0 2806400 1449900 1356500 32640 585 12388 12732 50854 50854 SQQESWDLEEK 11 1 0 Unmodified _SQQESWDLEEK_ 0 0 0 B3KVZ3;A0A0S2Z5T0;Q9H3R5;H0Y9E6 B3KVZ3 B3KVZ3 CENPH Centromere protein H MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.817 2 689.809696 1377.60484 73135.04 0.54939 0.00037897 -0.11921 -8.2233E-05 0.43017 0.00029674 689.809549094003 693.81658132015 57.657 0.39644 57.657 57.445 57.842 0 110 28 6 0 0 0 0.022516 1 28591 42.718 41.252 1 1.1302 0.90151 0 2404500 1152500 1252000 32641 585 12388 12732 50855 50855 SQQLDSNVTMPK 12 1 0 Oxidation (M) _SQQLDSNVTM(ox)PK_ SQQLDSNVTM(1)PK SQQLDSNVTM(73.07)PK 0 1 0 H0YDP6;H0YEL0;O14893 H0YDP6 H0YDP6 GEMIN2 Gem-associated protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.8376 2 682.329741 1362.64493 NaN NaN NaN 0.20736 0.00014149 NaN NaN NaN NaN 27.864 0.30146 27.864 27.737 28.038 -1.9073E-06 0 0 0 0.00058415 1 13182 73.067 45.952 1 NaN NaN 0 3725500 0 3725500 32642 1290 12389 12733 50856 50856 985 SQQQPTPVTPK 11 1 0 Unmodified _SQQQPTPVTPK_ 0 0 0 O95251 O95251 O95251 KAT7 Histone acetyltransferase KAT7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.8243 2 605.824952 1209.63535 79803.38 0.45685 0.00027677 0.10839 6.5665E-05 0.56524 0.00034244 605.825118983345 609.831859966455 22.927 0.35749 22.927 22.768 23.126 0 84 18 6 0 0 0 0.0052054 1 8887 56.632 15.203 1 0.8492 0.88266 0 14869000 7202400 7666500 32643 1422 12390 12734 50857 50857 SQQQPTPVTPK 11 1 0 Unmodified _SQQQPTPVTPK_ 0 0 0 O95251 O95251 O95251 KAT7 Histone acetyltransferase KAT7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.8316 2 605.824952 1209.63535 78752.59 0.52512 0.00031813 -0.12696 -7.6915E-05 0.39816 0.00024121 605.824870487266 609.832028390963 25.03 0.40157 25.03 24.825 25.227 1.9073E-06 100 21 7 0 0 0 0.0023604 2 8457 61.765 55.46 1 1.2968 1.012 0 2211200 825370 1385900 32644 1422 12390 12734 50858;50859 50858 SQSAAVTPSSTTSSTR 16 0 1 Unmodified _SQSAAVTPSSTTSSTR_ 0 0 0 Q68E00;Q16186;A0A087WX59 Q68E00 Q68E00 DKFZp686G2045;ADRM1 Proteasomal ubiquitin receptor ADRM1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.3867 2 784.381548 1566.74854 NaN NaN NaN 0.013664 1.0718E-05 NaN NaN NaN NaN 20.547 0.18008 20.547 20.45 20.63 -1.9073E-06 0 0 0 0.048186 1 6856 35.006 25.574 1 NaN NaN 0 881330 0 881330 32645 1768 12391 12735 50860 50860 SQSAFDLK 8 1 0 Unmodified _SQSAFDLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.2288 2 448.229625 894.444697 88978.04 0.31034 0.0001391 -0.31695 -0.00014207 -0.0066044 -2.9603E-06 448.229370759523 452.236486971364 41.081 0.56752 41.081 40.899 41.466 0 247 47 8 0 0 0 0.033338 1 22008 50.04 21.934 1 0.8403 0.98927 0 443630000 231170000 212460000 32646 69 12392 12736 50861 50861 SQSAFDLK 8 1 0 Unmodified _SQSAFDLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.4669 1 895.451973 894.444697 64931.4 0.77148 0.00069083 0.35915 0.00032161 1.1306 0.0010124 895.45231475215 903.466328076505 41.089 0.30777 41.089 40.939 41.247 0 87 26 5 0 0 0 0.0021589 1 22116 113.71 74.044 1 0.68616 0.76214 0 49769000 24007000 25762000 32647 69 12392 12736 50862 50862 SQSAFDLK 8 1 0 Unmodified _SQSAFDLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 452.2367 2 448.229625 894.444697 89841.48 -0.11338 -5.0821E-05 0.12124 5.4342E-05 0.0078572 3.5218E-06 448.22961376739 452.236687120991 48.113 0.7741 48.113 47.67 48.444 -3.8147E-06 247 53 8 0 0 0 0.053151 1 23366 42.599 20.828 1 1.7634 1.5066 0 66616000 24089000 42527000 32648 69 12392 12736 50863 50863 SQSAFDLK 8 1 0 Unmodified _SQSAFDLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 452.2368 2 448.229625 894.444697 89627 -0.23866 -0.00010697 -0.17313 -7.76E-05 -0.41178 -0.00018457 448.229405567786 452.23656967602 47.937 0.55396 47.937 47.695 48.249 0 243 46 8 0 0 0 0.035324 1 22689 49.097 37.686 1 1.7807 1.4988 0 52166000 19374000 32792000 32649 69 12392 12736 50864 50864 SQSAFDLKK 9 2 0 Unmodified _SQSAFDLKK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.2916 2 512.277106 1022.53966 NaN NaN NaN -0.2913 -0.00014923 NaN NaN NaN NaN 28.345 0.45095 28.345 28.163 28.614 0 0 0 0 0.0087367 1 11339 67.897 49.912 1 NaN NaN 0 5460300 0 5460300 32650 69 12393 12737 50865 50865 SQSDLTSTTNNPAFQQR 17 0 1 Unmodified _SQSDLTSTTNNPAFQQR_ 0 0 0 A7E2B6;B2RWN8;Q8WYB5 A7E2B6 A7E2B6 MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.9485 2 947.948118 1893.88168 NaN NaN NaN -0.3022 -0.00028647 NaN NaN NaN NaN 50.116 0.17165 50.116 50.003 50.174 0 0 0 0 0.0033242 1 28206 53.034 42.109 1 NaN NaN 0 3179100 3179100 0 32651 694 12394 12738 50866 50866 SQSEPSEQDGVLDLSTK 17 1 0 Unmodified _SQSEPSEQDGVLDLSTK_ 0 0 0 A0A1B0GUH9;A2VCT1;Q96JN0 A0A1B0GUH9 A0A1B0GUH9 LCOR Ligand-dependent corepressor ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 914.4425 2 910.431435 1818.84832 NaN NaN NaN 0.77616 0.00070664 NaN NaN NaN NaN 69.667 0.2626 69.667 69.533 69.795 0 0 0 0 1.2817E-26 1 40459 138.42 76.119 1 NaN NaN 0 6054500 0 6054500 32652 630 12395 12739 50867 50867 SQSEPSEQDGVLDLSTK 17 1 0 Unmodified _SQSEPSEQDGVLDLSTK_ 0 0 0 A0A1B0GUH9;A2VCT1;Q96JN0 A0A1B0GUH9 A0A1B0GUH9 LCOR Ligand-dependent corepressor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.4395 2 910.431435 1818.84832 64842.85 0.72298 0.00065823 0.40549 0.00036917 1.1285 0.0010274 910.933007165125 914.439279750722 68.511 0.27672 68.511 68.392 68.669 0 62 23 5 0 0 0 6.5206E-19 3 40662 136.99 136.99 1 1.6948 1.6947 0 15368000 5811500 9556700 32653 630 12395 12739 50868;50869;50870 50868 SQSIDTPGVISR 12 0 1 Unmodified _SQSIDTPGVISR_ 0 0 0 Q96ST3;H3BP90 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.3328 2 630.333141 1258.65173 78799.6 0.34772 0.00021918 -0.30445 -0.0001919 0.043276 2.7278E-05 630.833502403874 635.337537894397 52.722 0.88119 52.722 52.165 53.046 -3.8147E-06 156 65 4 0 0 0 0.017123 1 29288 41.704 31.181 1 0.62215 0.62119 0 16620000 8919800 7700200 32654 1990 12396 12740 50871 50871 SQSLLTFSTK 10 1 0 Unmodified _SQSLLTFSTK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.304 2 556.303321 1110.59209 82194.66 0.65863 0.0003664 -0.09809 -5.4568E-05 0.56054 0.00031183 556.303190281382 560.310294162634 75.465 1.766 75.465 74.387 76.153 0 529 147 5 0 0 0 0.00032108 2 44607 90.108 78.745 1 0.83414 0.84955 0 28048000 17091000 10957000 32655 716 12397 12741 50872;50873 50873 SQSLLTFSTK 10 1 0 Unmodified _SQSLLTFSTK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.3036 2 556.303321 1110.59209 NaN NaN NaN 0.045105 2.5092E-05 NaN NaN NaN NaN 74.523 1.5814 74.523 73.317 74.898 0 0 0 0 0.011287 1 44442 62.005 47.848 1 NaN NaN 0 22658000 22658000 0 32656 716 12397 12741 50874 50874 SQSLLTFSTK 10 1 0 Unmodified _SQSLLTFSTK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.3108 2 556.303321 1110.59209 NaN NaN NaN -0.040167 -2.2345E-05 NaN NaN NaN NaN 74.588 0.412 74.588 74.496 74.908 0 0 0 0 0.0022847 1 44897 81.338 56.415 1 NaN NaN 0 18985000 0 18985000 32657 716 12397 12741 50875 50875 SQSLLTFSTK 10 1 0 Unmodified _SQSLLTFSTK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.3035 2 556.303321 1110.59209 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.171 1 73.171 72.671 73.671 0 0 0 0 0.027727 1 43928 51.268 30.708 1 32658 716 12397 12741 50876 50876 SQSLLTFSTK 10 1 0 Unmodified _SQSLLTFSTK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.3041 2 556.303321 1110.59209 82019.63 0.40942 0.00022776 0.057161 3.1799E-05 0.46658 0.00025956 556.303323407677 560.310412071889 86.13 1.3384 86.13 85.403 86.741 0 435 88 8 0 0 0 0.024142 1 46925 45.158 43.359 1 1.2049 0.96169 0 9324500 4386400 4938100 32659 716 12397 12741 50877 50877 SQSLLTFSTK 10 1 0 Unmodified _SQSLLTFSTK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.3109 2 556.303321 1110.59209 81415.8 0.59773 0.00033252 -0.22816 -0.00012693 0.36956 0.00020559 556.303172242741 560.3102735778 86.098 1.1928 86.098 85.516 86.709 0 355 69 7 0 0 0 0.00094725 2 46330 78.655 78.655 1 1.1829 0.97044 0 8966600 4283500 4683200 32660 716 12397 12741 50878;50879 50879 SQSLPGADSLLAK 13 1 0 Unmodified _SQSLPGADSLLAK_ 0 0 0 F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 F2Z2U4 F2Z2U4 TRRAP Transformation/transcription domain-associated protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.8519 2 643.851167 1285.68778 NaN NaN NaN 0.036124 2.3258E-05 NaN NaN NaN NaN 78.666 0.30846 78.666 78.537 78.846 0 0 0 0 0.039559 1 47741 41.399 26.249 1 NaN NaN 0 5119300 5119300 0 32661 1253 12398 12742 50880 50880 SQSQLLNTLTK 11 1 0 Unmodified _SQSQLLNTLTK_ 0 0 0 A8K0P8;Q68CQ4 A8K0P8 A8K0P8 DIEXF Digestive organ expansion factor homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.8459 2 616.845884 1231.67722 77654.41 0.35335 0.00021796 0.2051 0.00012652 0.55845 0.00034448 616.846085032842 620.852985443792 80.971 0.67053 80.971 80.571 81.242 0 168 43 7 0 0 0 0.032358 1 43807 37.696 27.338 1 0.70767 0.55834 0 5417400 2904200 2513200 32662 699 12399 12743 50881 50881 SQSSDLLER 9 0 1 Unmodified _SQSSDLLER_ 0 0 0 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.7618 2 517.759278 1033.504 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.327 1 33.327 32.827 33.827 0 0 0 0 0.014831 1 16589 58.981 35.457 1 32663 1892 12400 12744 50882 50882 SQSSIVPEEEQAANK 15 1 0 Unmodified _SQSSIVPEEEQAANK_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;H7C048 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 812.8983 2 808.891748 1615.76894 68341.7 0.77454 0.00062652 -0.57687 -0.00046662 0.19767 0.0001599 808.891446020131 812.898234684784 39.117 0.46826 39.117 38.855 39.324 0 138 36 5 0 0 0 5.2091E-15 2 20180 125.82 108.79 1 0.72535 0.73414 0 18273000 10262000 8010900 32664 86 12401 12745 50883;50884 50884 SQSSIVPEEEQAANK 15 1 0 Unmodified _SQSSIVPEEEQAANK_ 0 0 0 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;H7C048 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.8994 2 808.891748 1615.76894 NaN NaN NaN -0.072924 -5.8988E-05 NaN NaN NaN NaN 38.023 0.33627 38.023 37.896 38.233 0 0 0 0 9.957E-06 1 19903 91.202 75.63 1 NaN NaN 0 9526000 0 9526000 32665 86 12401 12745 50885 50885 SQSSIVPEEEQAANKGEEK 19 2 0 Unmodified _SQSSIVPEEEQAANKGEEK_ 0 0 1 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;H7C048 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.0083 3 687.330795 2058.97056 72919.47 0.51269 0.00035239 0.40595 0.00027902 0.91865 0.00063142 687.665299364282 692.673986754165 31.738 0.36149 31.738 31.541 31.903 0 170 34 7 0 0 0 0.016321 1 15617 22.375 22.375 1 0.88168 1.0207 0 10356000 3857100 6498700 32666 86 12402 12746 50886 50886 SQSSIVPEEEQAANKGEEK 19 2 0 Unmodified _SQSSIVPEEEQAANKGEEK_ 0 0 1 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;H7C048 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.6663 3 687.330795 2058.97056 74263.3 0.51588 0.00035458 0.13688 9.4079E-05 0.65276 0.00044866 687.665352785547 692.673838449177 31.009 0.31873 31.009 30.878 31.197 0 115 26 7 0 0 0 6.7618E-06 2 15245 67.866 67.866 1 0.92194 1.0544 0 16787000 9250300 7536900 32667 86 12402 12746 50887;50888 50887 SQSSIVPEEEQAANKGEEK 19 2 0 Unmodified _SQSSIVPEEEQAANKGEEK_ 0 0 1 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;H7C048 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.0081 3 687.330795 2058.97056 73291.89 0.41584 0.00028582 -0.077547 -5.33E-05 0.3383 0.00023252 687.330726676443 692.673604042073 37.218 0.41542 37.218 37.023 37.439 0 195 33 8 0 0 0 0.033927 1 16771 19.292 19.292 1 1.2006 1.034 0 5966500 2752300 3214200 32668 86 12402 12746 50889 50889 SQSSIVPEEEQAANKGEEK 19 2 0 Unmodified _SQSSIVPEEEQAANKGEEK_ 0 0 1 B4DGM3;A0A024R1S7;Q969G3;K7EMQ8;H7C048 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.0082 3 687.330795 2058.97056 72943.77 0.33836 0.00023257 -0.12767 -8.7749E-05 0.21069 0.00014482 687.330675407689 692.673484181272 37.408 0.51103 37.408 37.126 37.637 0 250 41 8 0 0 0 0.046171 2 16420 17.148 17.148 1 1.1787 1.005 0 5075500 2335600 2740000 32669 86 12402 12746 50890;50891 50891 SQTELPDEK 9 1 0 Unmodified _SQTELPDEK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.754 2 523.753661 1045.49277 78373.29 0.69906 0.00036614 0.28786 0.00015077 0.98692 0.0005169 523.753817429312 527.760657774357 24.376 0.54304 24.376 24.125 24.668 1.9073E-06 47 21 4 0 0 0 0.0018185 1 10104 80.455 61.724 1 0.36022 0.35614 0 8370600 6410800 1959800 32670 1965 12403 12747 50892 50892 SQVAELNDDDKDDEIVFK 18 2 0 Unmodified _SQVAELNDDDKDDEIVFK_ 0 0 1 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.6732 3 693.995413 2078.96441 73029.05 0.72193 0.00050102 -0.027809 -1.9299E-05 0.69413 0.00048172 694.329800322768 699.338246040326 75.863 0.86978 75.863 75.499 76.369 0 496 73 10 0 0 0 1.3489E-39 2 44598 144.5 144.5 1 1.0477 1.2359 0 279340000 138050000 141290000 32671 2019 12404 12748 50893;50894 50894 SQVAELNDDDKDDEIVFK 18 2 0 Unmodified _SQVAELNDDDKDDEIVFK_ 0 0 1 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1040.4921 2 1040.48948 2078.96441 60627.95 0.50863 0.00052922 -0.034698 -3.6102E-05 0.47393 0.00049312 1040.99023480587 1048.50432478894 75.814 0.43695 75.814 75.627 76.064 0 173 37 6 0 0 0 0.00033948 1 44538 65.043 65.043 1 1.1386 1.3539 0 23840000 11378000 12462000 32672 2019 12404 12748 50895 50895 SQVAELNDDDKDDEIVFK 18 2 0 Unmodified _SQVAELNDDDKDDEIVFK_ 0 0 1 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.673 3 693.995413 2078.96441 72782.77 0.56951 0.00039524 -0.11236 -7.798E-05 0.45715 0.00031726 694.329580705169 699.338377580921 74.77 1.0858 74.77 74.417 75.503 0 638 96 10 0 0 0 9.5247E-13 2 45140 94.281 94.281 1 1.0719 1.2498 0 291680000 136010000 155670000 32673 2019 12404 12748 50896;50897 50897 SQVAELNDDDKDDEIVFK 18 2 0 Unmodified _SQVAELNDDDKDDEIVFK_ 0 0 1 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1048.5052 2 1040.48948 2078.96441 60575.53 0.33201 0.00034545 0.1428 0.00014858 0.47481 0.00049403 1040.48904012137 1048.50465834732 74.795 0.51315 74.795 74.548 75.061 0 200 46 7 0 0 0 3.5278E-22 2 44990 136.17 136.17 1 1.0555 1.2201 0 33358000 17129000 16228000 32674 2019 12404 12748 50898;50899 50899 SQVAELNDDDKDDEIVFK 18 2 0 Unmodified _SQVAELNDDDKDDEIVFK_ 0 0 1 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.3303 3 693.995413 2078.96441 73345.57 0.42403 0.00029427 0.045108 3.1305E-05 0.46914 0.00032558 694.32979663863 699.338467864895 86.809 0.94498 86.809 86.484 87.429 0 415 54 12 0 0 0 2.8672E-05 1 47567 54.368 54.368 1 1.3699 1.1596 0 81145000 33860000 47286000 32675 2019 12404 12748 50900 50900 SQVAELNDDDKDDEIVFK 18 2 0 Unmodified _SQVAELNDDDKDDEIVFK_ 0 0 1 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1040.4886 2 1040.48948 2078.96441 60646.1 0.21572 0.00022445 0.1743 0.00018136 0.39002 0.00040581 1040.99066015155 1049.00562558534 86.847 0.49626 86.847 86.618 87.114 0 168 27 8 0 0 0 0.0051561 1 47656 43.316 43.316 1 1.1865 1.0167 0 8592800 3812100 4780700 32676 2019 12404 12748 50901 50901 SQVAELNDDDKDDEIVFK 18 2 0 Unmodified _SQVAELNDDDKDDEIVFK_ 0 0 1 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 699.6732 3 693.995413 2078.96441 72545.59 0.51275 0.00035584 0.14154 9.8228E-05 0.65429 0.00045407 694.329815471959 699.338588497449 86.912 1.3209 86.912 86.619 87.94 -7.6294E-06 495 80 12 0 0 0 4.0194E-06 2 46924 60.062 60.062 1 1.3768 1.1753 0 62737000 26575000 36162000 32677 2019 12404 12748 50902;50903 50903 SQVAELNDDDKDDEIVFK 18 2 0 Unmodified _SQVAELNDDDKDDEIVFK_ 0 0 1 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1040.9904 2 1040.48948 2078.96441 60052.25 0.27978 0.00029111 -0.07312 -7.6081E-05 0.20666 0.00021503 1040.99031530492 1048.5037778191 86.902 0.56932 86.902 86.695 87.264 0 206 35 8 0 0 0 0.026516 1 46874 23.956 23.956 1 1.4378 1.2131 0 8626000 3611000 5015100 32678 2019 12404 12748 50904 50904 SQVEEELFSVR 11 0 1 Unmodified _SQVEEELFSVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.34 2 661.832974 1321.6514 NaN NaN NaN 0.60525 0.00040057 NaN NaN NaN NaN 86.942 0.63614 86.942 86.546 87.182 0 0 0 0 0.0089666 1 52310 60.434 47.807 1 NaN NaN 0 24810000 0 24810000 32679 1754 12405 12749 50905 50905 SQVEEELFSVR 11 0 1 Unmodified _SQVEEELFSVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.8394 2 661.832974 1321.6514 NaN NaN NaN 0.65938 0.0004364 NaN NaN NaN NaN 85.902 0.56358 85.902 85.664 86.227 0 0 0 0 0.0016351 1 52905 81.865 63.553 1 NaN NaN 0 12998000 0 12998000 32680 1754 12405 12749 50906 50906 SQVEEELFSVR 11 0 1 Unmodified _SQVEEELFSVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.8373 2 661.832974 1321.6514 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.945 1 99.945 99.445 100.45 0 0 0 0 0.0041696 1 56560 66.056 45.154 1 32681 1754 12405 12749 50907 50907 SQVEEELFSVR 11 0 1 Unmodified _SQVEEELFSVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 666.8383 2 661.832974 1321.6514 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.79 1 99.79 99.29 100.29 0 0 0 0 0.030564 1 55591 48.741 36.515 1 32682 1754 12405 12749 50908 50908 SQVEQQQLITVEK 13 1 0 Unmodified _SQVEQQQLITVEK_ 0 0 0 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.418 2 765.41212 1528.80969 72171.27 0.43158 0.00033033 -0.41314 -0.00031623 0.018433 1.4109E-05 765.411300521455 769.41905402083 58.288 0.34163 58.288 58.069 58.411 0 75 26 4 0 0 0 0.00018798 2 32995 71.085 71.085 1 0.97583 0.99185 0 6374300 2843700 3530600 32683 278 12406 12750 50909;50910 50909 SQVEQQQLITVEK 13 1 0 Unmodified _SQVEQQQLITVEK_ 0 0 0 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 769.4188 2 765.41212 1528.80969 71108.11 0.40731 0.00031176 -0.37826 -0.00028952 0.029046 2.2232E-05 765.41150037417 769.419061756479 57.248 0.30255 57.248 57.073 57.375 -3.8147E-06 73 21 5 0 0 0 0.00013338 2 33073 89.805 89.805 1 0.96438 0.99903 0 9801900 4892900 4909000 32684 278 12406 12750 50911;50912 50911 SQVEQQQLITVEK 13 1 0 Unmodified _SQVEQQQLITVEK_ 0 0 0 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.9106 2 765.41212 1528.80969 70823.91 0.57837 0.00044269 0.27702 0.00021203 0.85538 0.00065472 765.913904973201 769.419021423041 67.82 0.41685 67.82 67.62 68.037 0 108 27 6 0 0 0 0.040321 1 35312 31.35 31.35 1 1.199 0.97183 0 2735700 1503300 1232400 32685 278 12406 12750 50913 50913 SQVFSTAADGQTQVEIK 17 1 0 Unmodified _SQVFSTAADGQTQVEIK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 908.9627 2 904.95488 1807.89521 64102.58 0.5295 0.00047917 0.32706 0.00029598 0.85656 0.00077515 904.95512409089 908.962167449707 72.171 0.73865 72.171 71.86 72.598 0 289 54 7 0 0 0 3.7101E-18 1 42099 132.51 132.51 1 2.4009 2.7002 0 71304000 22068000 49236000 32686 1092 12407 12751 50914 50914 SQVFSTAADGQTQVEIK 17 1 0 Unmodified _SQVFSTAADGQTQVEIK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.9553 2 904.95488 1807.89521 63520.81 0.44484 0.00040256 0.21407 0.00019372 0.65891 0.00059628 904.954948768683 908.962037396263 71.122 0.64516 71.122 70.76 71.406 0 258 47 7 0 0 0 4.2395E-25 2 42454 141.46 130.25 1 2.4149 2.6988 0 88065000 25626000 62439000 32687 1092 12407 12751 50915;50916 50916 SQVFSTAADGQTQVEIK 17 1 0 Unmodified _SQVFSTAADGQTQVEIK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 909.4666 2 904.95488 1807.89521 NaN NaN NaN 0.1133 0.00010253 NaN NaN NaN NaN 71.456 0.10745 71.456 71.406 71.513 0 0 0 0 1.7951E-05 1 42797 78.486 64.328 1 NaN NaN 0 3916600 0 3916600 32688 1092 12407 12751 50917 50917 SQVFSTAADGQTQVEIK 17 1 0 Unmodified _SQVFSTAADGQTQVEIK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 909.4638 2 904.95488 1807.89521 64235.83 0.35389 0.00032025 0.55004 0.00049776 0.90393 0.00081801 904.955300984891 908.962210812644 82.787 0.61699 82.787 82.507 83.124 7.6294E-06 235 38 9 0 0 0 7.233E-05 2 45017 68.168 68.168 1 1.4743 1.1537 0 16424000 6036300 10388000 32689 1092 12407 12751 50918;50919 50918 SQVFSTAADGQTQVEIK 17 1 0 Unmodified _SQVFSTAADGQTQVEIK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 908.9628 2 904.95488 1807.89521 63689.31 0.31123 0.00028165 0.43857 0.00039689 0.7498 0.00067854 904.955111646816 908.961928585086 83.007 0.61203 83.007 82.701 83.313 0 231 35 10 0 0 0 7.453E-05 2 44336 66.285 66.285 1 1.4955 1.2007 0 14505000 5828900 8675700 32690 1092 12407 12751 50920;50921 50921 SQVLFHQLVPLQVK 14 1 0 Acetyl (Protein N-term) _(ac)SQVLFHQLVPLQVK_ 1 0 0 Q6UVJ0 Q6UVJ0 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.4966 2 839.487965 1676.96138 68623.09 0.88969 0.00074688 -0.068745 -5.7711E-05 0.82094 0.00068917 839.989725690453 843.494790829977 123.89 0.339 123.89 123.75 124.09 0 59 23 5 0 0 0 0.00028433 1 80382 73.632 73.632 1 2.5138 2.5932 0 4184600 1433000 2751600 32691 1862 12408 12752 50922 50922 SQVLFHQLVPLQVK 14 1 0 Acetyl (Protein N-term) _(ac)SQVLFHQLVPLQVK_ 1 0 0 Q6UVJ0 Q6UVJ0 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.9968 2 839.487965 1676.96138 NaN NaN NaN -0.17772 -0.00014919 NaN NaN NaN NaN 123.45 0.32127 123.45 123.3 123.62 -7.6294E-06 0 0 0 0.021596 1 81953 51.727 45.029 1 NaN NaN 0 2671700 0 2671700 32692 1862 12408 12752 50923 50923 SQVMDEATALQLR 13 0 1 Oxidation (M) _SQVM(ox)DEATALQLR_ SQVM(1)DEATALQLR SQVM(64.92)DEATALQLR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.3727 2 739.369398 1476.72424 NaN NaN NaN -0.81048 -0.00059924 NaN NaN NaN NaN 66.495 0.32036 66.495 66.329 66.649 0 0 0 0 0.0010917 2 39294 64.918 45.033 1 NaN NaN 0 6834600 6834600 0 32693 1754 12409 12753 50924;50925 50924 1619 SQVMDEATALQLR 13 0 1 Unmodified _SQVMDEATALQLR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.8734 2 731.37194 1460.72933 70164.23 0.48536 0.00035498 -1.3426 -0.00098192 -0.85721 -0.00062694 731.371405071208 736.374951909018 96.592 0.38552 96.592 96.313 96.699 0 60 21 6 0 0 0 0.040333 1 53418 31.348 21.116 1 2.1553 1.899 0 2469900 871930 1598000 32694 1754 12409 12754 50926 50926 SQVNGEAGSYEMTNQHVK 18 1 0 Oxidation (M) _SQVNGEAGSYEM(ox)TNQHVK_ SQVNGEAGSYEM(1)TNQHVK SQVNGEAGSYEM(60.53)TNQHVK 0 1 0 A0A024R5Q8;Q05D32;H0YMH7 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.6398 3 665.633932 1993.87997 75014.72 0.40394 0.00026888 -0.12228 -8.1396E-05 0.28166 0.00018748 665.63387881386 668.30506502271 21.043 0.22375 21.043 20.94 21.163 0 49 11 6 0 0 0 1.0604E-05 1 7234 60.528 54.986 1 1.0533 1.0828 0 11668000 5475400 6192400 32695 187 12410 12755 50927 50927 153 SQYEQLAEQNR 11 0 1 Unmodified _SQYEQLAEQNR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.8244 2 683.323305 1364.63206 NaN NaN NaN 0.070863 4.8422E-05 NaN NaN NaN NaN 31.849 0.95852 31.849 31.384 32.342 0 0 0 0 0.0016351 1 15509 81.865 75.561 1 NaN NaN 0 63976000 63976000 0 + 32696 1161 12411 12756 50928 50928 SQYEQLAEQNR 11 0 1 Unmodified _SQYEQLAEQNR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.323 2 683.323305 1364.63206 NaN NaN NaN -0.22001 -0.00015034 NaN NaN NaN NaN 31.265 0.84014 31.265 30.796 31.636 0 0 0 0 3.3584E-30 1 15174 157.75 157.75 1 NaN NaN 0 72248000 72248000 0 + 32697 1161 12411 12756 50929 50929 SQYEQLAEQNR 11 0 1 Unmodified _SQYEQLAEQNR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 683.3239 2 683.323305 1364.63206 NaN NaN NaN -0.15803 -0.00010798 NaN NaN NaN NaN 37.084 0.82058 37.084 36.73 37.55 0 0 0 0 4.8809E-16 1 16578 133.76 133.76 1 NaN NaN 0 28479000 28479000 0 + 32698 1161 12411 12756 50930 50930 SQYEQLAEQNR 11 0 1 Unmodified _SQYEQLAEQNR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.3223 2 683.323305 1364.63206 NaN NaN NaN -0.054966 -3.7559E-05 NaN NaN NaN NaN 37.342 0.90858 37.342 36.972 37.881 0 0 0 0 0.037905 1 16196 47.844 43.393 1 NaN NaN 0 24070000 24070000 0 + 32699 1161 12411 12756 50931 50931 SQYEQLAEQNRK 12 1 1 Unmodified _SQYEQLAEQNRK_ 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.583 3 498.58295 1492.72702 NaN NaN NaN 0.10367 5.1686E-05 NaN NaN NaN NaN 23.109 1.0356 23.109 22.63 23.666 1.9073E-06 0 0 0 1.187E-13 1 8958 103.75 89.19 1 NaN NaN 0 319180000 319180000 0 + 32700 1161 12412 12757 50932 50932 SQYEQLAEQNRK 12 1 1 Unmodified _SQYEQLAEQNRK_ 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3731 2 747.370786 1492.72702 NaN NaN NaN 0.3753 0.00028049 NaN NaN NaN NaN 22.855 0.59391 22.855 22.63 23.224 -1.9073E-06 0 0 0 5.4003E-185 1 8676 276.21 257.54 1 NaN NaN 0 259370000 259370000 0 + 32701 1161 12412 12757 50933 50933 SQYEQLAEQNRK 12 1 1 Unmodified _SQYEQLAEQNRK_ 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.5827 3 498.58295 1492.72702 NaN NaN NaN 0.27045 0.00013484 NaN NaN NaN NaN 22.855 0.85587 22.855 22.611 23.467 0 0 0 0 5.662E-10 1 8701 98.105 86.129 1 NaN NaN 0 366810000 366810000 0 + 32702 1161 12412 12757 50934 50934 SQYEQLAEQNRK 12 1 1 Unmodified _SQYEQLAEQNRK_ 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.3711 2 747.370786 1492.72702 NaN NaN NaN -0.19312 -0.00014433 NaN NaN NaN NaN 25.86 0.98313 25.86 25.635 26.618 1.9073E-06 0 0 0 2.1885E-08 1 9504 112.15 112.15 1 NaN NaN 0 70365000 70365000 0 + 32703 1161 12412 12757 50935 50935 SQYEQLAEQNRK 12 1 1 Unmodified _SQYEQLAEQNRK_ 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.5829 3 498.58295 1492.72702 NaN NaN NaN -0.33879 -0.00016892 NaN NaN NaN NaN 25.858 0.95951 25.858 25.635 26.595 1.9073E-06 0 0 0 1.6564E-09 1 9513 101.71 96.863 1 NaN NaN 0 107440000 107440000 0 + 32704 1161 12412 12757 50936 50936 SQYEQLAEQNRK 12 1 1 Unmodified _SQYEQLAEQNRK_ 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 747.3701 2 747.370786 1492.72702 NaN NaN NaN 0.04867 3.6374E-05 NaN NaN NaN NaN 25.968 0.92301 25.968 25.713 26.636 0 0 0 0 2.4196E-08 1 9064 111.5 111.5 1 NaN NaN 0 62103000 62103000 0 + 32705 1161 12412 12757 50937 50937 SQYEQLAEQNRK 12 1 1 Unmodified _SQYEQLAEQNRK_ 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.5829 3 498.58295 1492.72702 NaN NaN NaN 0.13246 6.6042E-05 NaN NaN NaN NaN 26.014 1.0013 26.014 25.713 26.714 -1.9073E-06 0 0 0 9.0711E-06 1 9075 83.314 78.137 1 NaN NaN 0 76167000 76167000 0 + 32706 1161 12412 12757 50938 50938 SRAEAALEEESR 12 0 2 Unmodified _SRAEAALEEESR_ 0 0 1 B4DGM3;A0A024R1S7;Q969G3;J3QKS7;J3KT85;J3QR61;C0IMW8 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3371 2 674.328587 1346.64262 72948.08 0.42651 0.00028761 -0.060393 -4.0724E-05 0.36612 0.00024689 674.328460300685 684.336911500355 22.582 0.27033 22.582 22.478 22.748 0 82 17 7 0 0 0 0.00014457 2 8665 100.22 100.22 1 0.72784 0.78674 0 20428000 11330000 9098100 32707 86 12413 12758 50939;50940 50940 SRAEAALEEESR 12 0 2 Unmodified _SRAEAALEEESR_ 0 0 1 B4DGM3;A0A024R1S7;Q969G3;J3QKS7;J3KT85;J3QR61;C0IMW8 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.3287 2 674.328587 1346.64262 72506.48 0.21819 0.00014713 0.21556 0.00014536 0.43374 0.00029249 674.328494574892 684.337068048855 21.912 0.28201 21.912 21.779 22.061 1.9073E-06 50 11 7 0 0 0 0.0012764 1 7981 102.97 102.97 1 0.98432 1.1055 0 27964000 13693000 14271000 32708 86 12413 12758 50941 50941 SRAEAALEEESR 12 0 2 Unmodified _SRAEAALEEESR_ 0 0 1 B4DGM3;A0A024R1S7;Q969G3;J3QKS7;J3KT85;J3QR61;C0IMW8 B4DGM3 B4DGM3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.8875 3 449.88815 1346.64262 91616.2 -0.20536 -9.2388E-05 -0.11935 -5.3694E-05 -0.32471 -0.00014608 449.88782168344 456.560424577129 21.915 0.25892 21.915 21.762 22.021 -1.9073E-06 40 10 6 0 0 0 0.0043096 2 8033 47.189 47.189 1 1.2847 1.2993 0 10840000 4783600 6056700 32709 86 12413 12758 50942;50943 50943 SRAEAESMYQIK 12 1 1 Oxidation (M) _SRAEAESM(ox)YQIK_ SRAEAESM(1)YQIK SRAEAESM(89.8)YQIK 0 1 1 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8547 2 714.843016 1427.67148 71189.09 0.51056 0.00036497 -3.0157 -0.0021558 -2.5051 -0.0017908 715.340000614941 723.854291091966 23.329 0.66267 23.329 22.979 23.642 0 157 32 9 0 0 0 0.00017148 2 9099 89.805 62.062 1 1.2269 1.4764 0 92161000 41435000 50726000 + 32710 1156 12414 12759 50944;50945 50944 862 SRAEAESMYQIK 12 1 1 Oxidation (M) _SRAEAESM(ox)YQIK_ SRAEAESM(1)YQIK SRAEAESM(64.22)YQIK 0 1 1 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.9052 3 476.897769 1427.67148 86407.76 -0.20602 -9.8249E-05 0.011307 5.3925E-06 -0.19471 -9.2856E-05 476.89790481639 482.905288074664 23.378 0.5374 23.378 23.061 23.599 0 128 25 6 0 0 0 0.00022432 1 9125 64.224 58.741 1 1.4327 1.7105 0 51884000 20044000 31841000 + 32711 1156 12414 12759 50946 50946 862 SRAEAESMYQIK 12 1 1 Oxidation (M) _SRAEAESM(ox)YQIK_ SRAEAESM(1)YQIK SRAEAESM(108.98)YQIK 0 1 1 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.8433 2 714.843016 1427.67148 67021.68 0.27362 0.00019559 -2.4115 -0.0017239 -2.1379 -0.0015283 715.339924769816 723.854419686627 22.949 0.54431 22.949 22.611 23.155 0 165 23 9 0 0 0 6.788E-06 3 8705 108.98 70.681 1 1.144 1.3509 0 136930000 72636000 64291000 + 32712 1156 12414 12759 50947;50948;50949 50948 862 SRAEAESMYQIK 12 1 1 Oxidation (M) _SRAEAESM(ox)YQIK_ SRAEAESM(1)YQIK SRAEAESM(77.28)YQIK 0 1 1 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.898 3 476.897769 1427.67148 85600.93 -0.18317 -8.7353E-05 0.087136 4.1555E-05 -0.096033 -4.5798E-05 476.89797696102 482.905312469643 22.935 0.56733 22.935 22.588 23.155 0 145 24 8 0 0 0 4.8337E-05 1 8879 77.279 77.279 1 1.4169 1.6517 0 44548000 17257000 27291000 + 32713 1156 12414 12759 50950 50950 862 SRAEAESMYQIK 12 1 1 Oxidation (M) _SRAEAESM(ox)YQIK_ SRAEAESM(1)YQIK SRAEAESM(40.15)YQIK 0 1 1 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.8547 2 714.843016 1427.67148 70777.1 0.67345 0.00048141 -0.30784 -0.00022006 0.36561 0.00026135 714.84278756485 723.854015546659 25.631 0.56753 25.631 25.363 25.931 -1.9073E-06 135 23 8 0 0 0 0.01639 1 8873 40.154 27.577 1 1.2149 1.0243 0 3912800 1599100 2313700 + 32714 1156 12414 12759 50951 50951 862 SRAEAESMYQIK 12 1 1 Unmodified _SRAEAESMYQIK_ 0 0 1 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.3465 2 706.845558 1411.67656 71161.7 0.45288 0.00032012 0.3978 0.00028118 0.85068 0.0006013 706.845565371452 715.856874400225 39.611 0.40002 39.611 39.431 39.831 -3.8147E-06 116 27 6 0 0 0 0.019224 1 18170 55.718 55.718 1 2.4611 2.0323 0 4101100 1216200 2884900 + 32715 1156 12414 12760 50952 50952 SRDFNEECPR 10 0 2 Unmodified _SRDFNEECPR_ 0 0 1 V9HWF0;A0A0A0MTH3;Q13418 V9HWF0 V9HWF0 HEL-S-28;ILK Integrin-linked protein kinase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.8624 3 437.191176 1308.5517 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.903 1 18.903 18.403 19.403 0 0 0 0 0.048838 1 5452 39.179 24.362 1 32716 487 12415 12761 50953 50953 SRDPIIFSVGWR 12 0 2 Unmodified _SRDPIIFSVGWR_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.9336 3 478.261371 1431.76228 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.483 1 97.483 96.983 97.983 -7.6294E-06 0 0 0 0.0039647 1 60919 59.898 39.436 1 32717 1742 12416 12762 50954 50954 SRDPIIFSVGWR 12 0 2 Unmodified _SRDPIIFSVGWR_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.9336 3 478.261371 1431.76228 88215.29 0.34801 0.00016644 0.044626 2.1343E-05 0.39263 0.00018778 478.261316798548 484.933537602076 110.06 0.61857 110.06 109.82 110.44 0 137 31 6 0 0 0 0.028969 1 63567 24.275 14.488 1 1.0691 0.93488 0 4524800 2030800 2494000 32718 1742 12416 12762 50955 50955 SRDPIIFSVGWR 12 0 2 Unmodified _SRDPIIFSVGWR_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.9333 3 478.261371 1431.76228 88257.92 0.49519 0.00023683 -0.1234 -5.902E-05 0.37179 0.00017781 478.26122259771 484.933463948317 109.7 0.5584 109.7 109.51 110.07 0 121 28 7 0 0 0 0.0046108 1 62259 35.809 26.759 1 1.0684 0.96807 0 5219600 2274500 2945100 32719 1742 12416 12762 50956 50956 SRDPLLSQR 9 0 2 Unmodified _SRDPLLSQR_ 0 0 1 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1;B3KQ09 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.2991 2 536.298904 1070.58326 80810.16 0.35937 0.00019273 -0.33179 -0.00017794 0.027586 1.4794E-05 536.298688872654 546.307033065051 25.644 0.39473 25.644 25.469 25.864 0 109 22 6 0 0 0 0.0062996 2 11221 89.029 63.455 1 0.7099 0.77156 0 42256000 23122000 19134000 32720 80 12417 12763 50957;50958 50958 SRDPLLSQR 9 0 2 Unmodified _SRDPLLSQR_ 0 0 1 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1;B3KQ09 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.3085 2 536.298904 1070.58326 80329.08 0.79532 0.00042653 -0.34078 -0.00018276 0.45455 0.00024377 536.298705260594 546.307087568846 25.137 0.36472 25.137 24.963 25.328 -1.9073E-06 54 13 6 0 0 0 0.0028262 1 10791 98.048 53.699 1 0.76801 0.88989 0 77116000 44101000 33015000 32721 80 12417 12763 50959 50959 SREDAGDNDDTEGAIGVR 18 0 2 Unmodified _SREDAGDNDDTEGAIGVR_ 0 0 1 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 939.4205 2 938.917014 1875.81948 64050.07 0.4642 0.00043585 0.34734 0.00032613 0.81155 0.00076197 938.917276725347 948.926089109191 28.999 0.18128 28.999 28.866 29.048 0 35 8 6 0 0 0 5.006E-05 2 13889 80.522 74.282 1 1.3947 1.5088 0 21931000 7789700 14141000 32722 313 12418 12764 50960;50961 50961 SREDAGDNDDTEGAIGVR 18 0 2 Unmodified _SREDAGDNDDTEGAIGVR_ 0 0 1 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.2809 3 626.280435 1875.81948 76079.52 0.52001 0.00032567 0.26144 0.00016374 0.78145 0.00048941 626.280724203299 632.952748729319 28.993 0.29127 28.993 28.85 29.141 0 59 14 7 0 0 0 1.535E-05 1 13941 45.844 41.876 1 1.1628 1.2646 0 52032000 22735000 29297000 32723 313 12418 12764 50962 50962 SREDAGDNDDTEGAIGVR 18 0 2 Unmodified _SREDAGDNDDTEGAIGVR_ 0 0 1 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 948.9244 2 938.917014 1875.81948 63973.02 0.6737 0.00063255 -0.28895 -0.0002713 0.38475 0.00036125 938.916555783482 948.924910265099 28.155 0.15871 28.155 28.076 28.235 0 18 6 5 0 0 0 0.00016619 2 13354 65.805 59.565 1 1.4599 1.5616 0 15706000 6016800 9689100 32724 313 12418 12764 50963;50964 50963 SREDAGDNDDTEGAIGVR 18 0 2 Unmodified _SREDAGDNDDTEGAIGVR_ 0 0 1 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;Q7Z4B1 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP;MST162 Probable ATP-dependent RNA helicase DDX47 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.3311 3 626.280435 1875.81948 77176.88 0.6778 0.00042449 0.2065 0.00012933 0.8843 0.00055382 626.61456839949 632.952302312152 28.156 0.24765 28.156 28.038 28.286 1.9073E-06 48 10 8 0 0 0 0.0066972 1 13314 36.384 30.48 1 0.9846 1.1287 0 50853000 24126000 26727000 32725 313 12418 12764 50965 50965 SREDEDALEQAR 12 0 2 Unmodified _SREDEDALEQAR_ 0 0 1 O60885;Q96HN0 O60885 O60885 BRD4 Bromodomain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.8363 2 709.828951 1417.64335 72675.6 0.66715 0.00047356 0.1309 9.2919E-05 0.79805 0.00056648 709.829024362067 719.836632876532 22.608 0.33067 22.608 22.46 22.791 0 50 13 6 0 0 0 0.0047444 1 8575 64.439 53.915 1 0.64278 0.63941 0 7890100 4853400 3036600 32726 1399 12419 12765 50966 50966 SREIFLSQPILLELEAPLK 19 1 1 Unmodified _SREIFLSQPILLELEAPLK_ 0 0 1 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;F8WE71;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.0945 3 732.759462 2195.25656 70000.12 0.8147 0.00059698 -0.0048906 -3.5837E-06 0.80981 0.0005934 733.093699738567 739.101206142621 132.96 0.18257 132.96 132.86 133.04 0 57 7 10 0 0 0 7.9032E-40 2 86944 151.87 151.87 1 1.5352 1.8449 0 74789000 31311000 43478000 32727 1632;343;1633 12420 12766 50967;50968 50968 SREIFLSQPILLELEAPLK 19 1 1 Unmodified _SREIFLSQPILLELEAPLK_ 0 0 1 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;F8WE71;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.0945 3 732.759462 2195.25656 70754.26 1.0434 0.00076459 0.096137 7.0446E-05 1.1396 0.00083504 733.093898600773 739.101239430237 132.92 0.21904 132.92 132.81 133.03 0 92 11 12 0 0 0 1.7159E-12 2 89098 107.33 107.33 1 1.4088 1.6657 0 168420000 67176000 101250000 32728 1632;343;1633 12420 12766 50969;50970 50969 SREIFLSQPILLELEAPLK 19 1 1 Unmodified _SREIFLSQPILLELEAPLK_ 0 0 1 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;F8WE71;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1107.6475 2 1098.63555 2195.25656 61172.84 0.41217 0.00045283 -0.19889 -0.00021851 0.21328 0.00023432 1098.63345859198 1108.14853370502 132.92 0.10544 132.92 132.84 132.95 0 19 5 5 0 0 0 0.032205 1 89115 30.828 30.828 1 1.0368 1.1447 0 6793700 3363300 3430400 32729 1632;343;1633 12420 12766 50971 50971 SREIFLSQPILLELEAPLK 19 1 1 Unmodified _SREIFLSQPILLELEAPLK_ 0 0 1 P62136;A0A140VJS9;B3KXM2;E9PMD7;F5H1L6;F5H037;F8WE71;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.7679 3 732.759462 2195.25656 70963.43 0.9252 0.00067795 0.084479 6.1903E-05 1.0097 0.00073985 733.093762133931 738.767078825628 134.66 0.2012 134.66 134.56 134.76 0 29 4 10 0 0 0 5.6489E-17 1 81463 90.316 90.316 1 2.3533 2.0064 0 54760000 16633000 38126000 32730 1632;343;1633 12420 12766 50972 50972 SRENPEEDEDQRNPAK 16 1 2 Unmodified _SRENPEEDEDQRNPAK_ 0 0 2 B1APM4;P35610 B1APM4 B1APM4 SOAT1 Sterol O-acyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.6243 3 638.624313 1912.85111 74975.31 0.037796 2.4137E-05 0.14682 9.3766E-05 0.18462 0.0001179 638.958943208935 647.967956934026 14.779 0.23455 14.779 14.679 14.913 0 81 16 8 0 0 0 0.00031634 1 2548 53.995 53.995 1 1.4013 1.5328 0 4074900 1699700 2375200 32731 820 12421 12767 50973 50973 SREQSSEAAETGVSENEENPVR 22 0 2 Unmodified _SREQSSEAAETGVSENEENPVR_ 0 0 1 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.3707 3 802.365227 2404.07385 NaN NaN NaN -0.84806 -0.00068045 NaN NaN NaN NaN 30.389 0.10557 30.389 30.341 30.446 -1.9073E-06 0 0 0 0.0064066 1 14902 37.825 34.277 1 NaN NaN 0 4776500 0 4776500 32732 1270 12422 12768 50974 50974 SREQSSEAAETGVSENEENPVR 22 0 2 Unmodified _SREQSSEAAETGVSENEENPVR_ 0 0 1 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 802.6989 3 802.365227 2404.07385 68462.5 0.43058 0.00034548 0.39079 0.00031356 0.82137 0.00065904 802.699963987858 809.036806954964 36.884 0.24983 36.884 36.773 37.023 0 61 21 5 0 0 0 9.2973E-08 1 16564 60.133 59.602 1 0.6212 0.56641 0 2298300 1324100 974240 32733 1270 12422 12768 50975 50975 SRFWYFVSQLK 11 1 1 Unmodified _SRFWYFVSQLK_ 0 0 1 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.9283 3 487.59435 1459.76122 89837.35 0.37503 0.00018286 -0.039415 -1.9218E-05 0.33561 0.00016364 487.594369398528 493.601744770463 106.88 0.43541 106.88 106.55 106.98 -7.6294E-06 75 34 4 0 0 0 0.010689 1 67998 35.006 35.006 1 0.84558 0.9365 0 8245500 4836400 3409100 32734 1003 12423 12769 50976 50976 SRFWYFVSQLK 11 1 1 Unmodified _SRFWYFVSQLK_ 0 0 1 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.9277 3 487.59435 1459.76122 86923.96 0.54229 0.00026442 -0.090119 -4.3942E-05 0.45217 0.00022047 487.594261914806 493.601657482067 115.22 0.50835 115.22 115.02 115.53 0 77 23 6 0 0 0 0.023015 1 67418 28.327 28.327 1 0.79519 0.72028 0 1838700 1211500 627240 32735 1003 12423 12769 50977 50977 SRFWYFVSQLK 11 1 1 Unmodified _SRFWYFVSQLK_ 0 0 1 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;Q32XH3 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.595 3 487.59435 1459.76122 90067.1 0.38346 0.00018697 0.060122 2.9315E-05 0.44358 0.00021629 487.594240453822 493.93632762809 114.74 0.44474 114.74 114.57 115.02 -7.6294E-06 72 19 5 0 0 0 0.044886 1 66245 28.903 28.903 1 0.96097 0.82725 0 1869600 779070 1090600 32736 1003 12423 12769 50978 50978 SRGGGEGNVDETGNNPSVSLK 21 1 1 Unmodified _SRGGGEGNVDETGNNPSVSLK_ 0 0 1 A4LAA3;P46100;B4DHH8;B4DLE1;A0A096LNX6 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.0056 3 691.998039 2072.97229 71616.21 0.28392 0.00019647 0.34103 0.000236 0.62495 0.00043246 692.332490778336 698.005703904907 39.883 0.35404 39.883 39.701 40.055 0 112 27 6 0 0 0 0.018662 1 17802 21.172 21.172 1 1.2268 1.0586 0 2062100 838310 1223800 32737 672 12424 12770 50979 50979 SRLDQELK 8 1 1 Unmodified _SRLDQELK_ 0 0 1 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.7749 2 494.774731 987.534909 84964.86 0.66414 0.0003286 -0.43189 -0.00021369 0.23225 0.00011491 494.774741293571 503.785689554438 24.27 0.95606 24.27 24.038 24.994 0 140 43 8 0 0 0 7.0038E-05 1 9997 144.9 71.284 1 1.0067 1.227 0 667030000 321410000 345620000 32738 157 12425 12771 50980 50980 SRLDQELK 8 1 1 Unmodified _SRLDQELK_ 0 0 1 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.7862 2 494.774731 987.534909 83826.86 0.12866 6.3655E-05 -1.0787 -0.00053373 -0.95007 -0.00047007 494.77496614041 503.785778859268 23.608 0.89258 23.608 23.179 24.072 0 164 37 11 0 0 0 0.0085183 1 9367 107.69 58.27 1 0.72844 0.87205 0 1219000000 727050000 491910000 32739 157 12425 12771 50981 50981 SRLDQELK 8 1 1 Unmodified _SRLDQELK_ 0 0 1 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.7754 2 494.774731 987.534909 84212.18 0.094513 4.6763E-05 -0.74505 -0.00036863 -0.65053 -0.00032187 494.774927403333 503.78573609133 26.154 1.6946 26.154 25.554 27.249 0 246 74 7 0 0 0 0.051443 1 9177 74.301 25.74 1 0.7877 0.67372 0 105780000 62014000 43771000 32740 157 12425 12771 50982 50982 SRLEVAEAEEEETSIK 16 1 1 Unmodified _SRLEVAEAEEEETSIK_ 0 0 1 B0UZZ8;O15213;B4DNI0;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.3037 3 607.302177 1818.8847 77610.73 0.72239 0.00043871 -0.13176 -8.0021E-05 0.59062 0.00035869 607.302284221304 613.309709826004 56.114 0.91603 56.114 55.724 56.64 3.8147E-06 253 75 5 0 0 0 0.0011318 1 31414 40.844 40.844 1 0.59697 0.6764 0 23661000 15168000 8493000 32741 809 12426 12772 50983 50983 SRLEVAEAEEEETSIK 16 1 1 Unmodified _SRLEVAEAEEEETSIK_ 0 0 1 B0UZZ8;O15213;B4DNI0;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.3082 3 607.302177 1818.8847 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.488 1 55.488 54.988 55.988 -3.8147E-06 0 0 0 0.02364 1 31196 38.996 28.527 1 32742 809 12426 12772 50984 50984 SRLEVAEAEEEETSIK 16 1 1 Unmodified _SRLEVAEAEEEETSIK_ 0 0 1 B0UZZ8;O15213;B4DNI0;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.3031 3 607.302177 1818.8847 78235.66 0.52793 0.00032061 0.3274 0.00019883 0.85533 0.00051944 607.636420110009 613.309643469475 53.727 0.78439 53.727 53.398 54.182 -3.8147E-06 250 75 6 0 0 0 6.9655E-05 1 30598 62.203 57.495 1 0.87826 1.0199 0 38022000 16068000 21954000 32743 809 12426 12772 50985 50985 SRLEVAEAEEEETSIK 16 1 1 Unmodified _SRLEVAEAEEEETSIK_ 0 0 1 B0UZZ8;O15213;B4DNI0;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.4609 2 910.449627 1818.8847 NaN NaN NaN 0.31146 0.00028357 NaN NaN NaN NaN 53.584 0.30598 53.584 53.44 53.746 -3.8147E-06 0 0 0 2.9058E-11 1 30583 106.52 51.825 1 NaN NaN 0 5670800 0 5670800 32744 809 12426 12772 50986 50986 SRLEVAEAEEEETSIK 16 1 1 Unmodified _SRLEVAEAEEEETSIK_ 0 0 1 B0UZZ8;O15213;B4DNI0;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.3102 3 607.302177 1818.8847 77281.63 0.49212 0.00029886 0.30736 0.00018666 0.79947 0.00048552 607.302517823958 613.309721446142 64.949 0.66461 64.949 64.704 65.368 0 293 51 8 0 0 0 3.1721E-05 2 33518 63.691 60.257 1 1.1876 1.0261 0 13911000 5057800 8853000 32745 809 12426 12772 50987;50988 50988 SRLEVAEAEEEETSIK 16 1 1 Unmodified _SRLEVAEAEEEETSIK_ 0 0 1 B0UZZ8;O15213;B4DNI0;B4DP15;A8K806;A0A140T9L0;A0A0G2JJL1;H0Y6G3 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.31 3 607.302177 1818.8847 76736.52 0.30979 0.00018814 0.51873 0.00031503 0.82852 0.00050316 607.636609011017 613.309917956738 65.46 0.57017 65.46 65.17 65.74 0 258 41 8 0 0 0 5.4987E-05 2 33124 58.712 56.529 1 1.1992 1.0145 0 10959000 4319100 6639900 32746 809 12426 12772 50989;50990 50990 SRPAPSPESIK 11 1 1 Unmodified _SRPAPSPESIK_ 0 0 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.8201 2 584.81967 1167.62479 79509.05 0.24935 0.00014583 0.71899 0.00042048 0.96834 0.00056631 584.819983426134 593.831426007932 21.822 0.39584 21.822 21.659 22.055 0 92 24 5 0 0 0 5.8734E-05 1 7976 108.47 108.47 1 0.85819 1.0314 0 75491000 44053000 31438000 32747 1933 12427 12773 50991 50991 SRPAPSPESIK 11 1 1 Unmodified _SRPAPSPESIK_ 0 0 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.8201 2 584.81967 1167.62479 79521.51 0.46862 0.00027406 0.11075 6.4767E-05 0.57937 0.00033882 584.81966273704 593.830925884663 21.614 0.45844 21.614 21.408 21.866 0 100 22 6 0 0 0 2.111E-09 3 7645 131.82 131.82 1 0.83426 0.98422 0 118710000 61224000 57482000 32748 1933 12427 12773 50992;50993;50994 50992 SRPAPSPESIK 11 1 1 Unmodified _SRPAPSPESIK_ 0 0 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.8306 2 584.81967 1167.62479 78262.48 0.43553 0.0002547 0.72507 0.00042403 1.1606 0.00067874 584.819873521309 593.83158324408 23.717 0.39474 23.717 23.559 23.954 0 87 20 6 0 0 0 0.0018486 2 8077 85.958 85.958 1 1.4397 1.2453 0 14688000 5646000 9041600 32749 1933 12427 12773 50995;50996 50995 SRPAPSPESIK 11 1 1 Unmodified _SRPAPSPESIK_ 0 0 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.8199 2 584.81967 1167.62479 78620.45 0.37257 0.00021789 0.56174 0.00032852 0.93432 0.00054641 584.819871300625 593.831437541365 23.574 0.4805 23.574 23.361 23.842 1.9073E-06 109 26 6 0 0 0 0.0026125 1 7510 74.841 74.841 1 1.2892 1.0909 0 11446000 4640000 6805800 32750 1933 12427 12773 50997 50997 SRPETGRPRPK 11 1 3 Unmodified _SRPETGRPRPK_ 0 0 3 P46783;Q59GE4;F6U211;S4R435;Q9NQ39 P46783 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 439.9283 3 427.577582 1279.71092 89776.41 -0.75203 -0.00032155 0.26581 0.00011365 -0.48622 -0.0002079 427.577699602091 440.257336299374 14.393 0.22825 14.393 14.311 14.539 0 101 19 8 0 0 0 0.052713 1 2404 14.876 11.231 1 1.1196 1.223 0 3740600 1709000 2031600 32751 1573 12428 12774 50998 50998 SRPFTVAASFQSTSVK 16 1 1 Unmodified _SRPFTVAASFQSTSVK_ 0 0 1 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.6453 3 571.637054 1711.88933 NaN NaN NaN -0.75629 -0.00043232 NaN NaN NaN NaN 68.769 1.0927 68.769 68.113 69.206 0 0 0 0 3.2572E-06 1 39626 82.747 69.869 1 NaN NaN 0 36494000 0 36494000 32752 1010 12429 12775 50999 50999 SRPFTVAASFQSTSVK 16 1 1 Unmodified _SRPFTVAASFQSTSVK_ 0 0 1 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.9651 2 856.951943 1711.88933 NaN NaN NaN -0.061855 -5.3007E-05 NaN NaN NaN NaN 68.542 0.28944 68.542 68.332 68.621 0 0 0 0 0.010207 1 39666 66.004 49.342 1 NaN NaN 0 8766100 0 8766100 32753 1010 12429 12775 51000 51000 SRPFTVAASFQSTSVK 16 1 1 Unmodified _SRPFTVAASFQSTSVK_ 0 0 1 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.979 3 571.637054 1711.88933 78782.5 0.40068 0.00022904 0.14354 8.2055E-05 0.54422 0.0003111 571.971326377317 577.644602825143 78.121 0.69827 78.121 77.792 78.49 0 213 45 8 0 0 0 6.1488E-05 2 41774 57.936 57.936 1 5.2798 4.5525 0 12537000 2083900 10453000 32754 1010 12429 12775 51001;51002 51001 SRPFTVAASFQSTSVK 16 1 1 Unmodified _SRPFTVAASFQSTSVK_ 0 0 1 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.6448 3 571.637054 1711.88933 78627.16 0.506 0.00028925 -0.059589 -3.4063E-05 0.44641 0.00025519 571.971390304854 577.644570313952 78.193 0.95814 78.193 77.607 78.565 -7.6294E-06 215 60 7 0 0 0 7.1097E-05 1 41058 57.616 57.616 1 5.0191 4.2455 0 10729000 1909100 8820100 32755 1010 12429 12775 51003 51003 SRPQGLTEAEQR 12 0 2 Unmodified _SRPQGLTEAEQR_ 0 0 1 Q00653;A0A1P8C958;D3DR86 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.8629 2 686.352397 1370.69024 73813.24 0.48854 0.00033531 0.44928 0.00030836 0.93782 0.00064367 686.352450107508 696.361192274633 19.48 0.32429 19.48 19.364 19.689 0 54 15 5 0 0 0 0.016615 1 5892 58.37 58.37 1 2.6771 2.6979 0 10125000 2217900 7907300 32756 1674 12430 12776 51004 51004 SRPTSEGSDIESTEPQK 17 1 1 Unmodified _SRPTSEGSDIESTEPQK_ 0 0 1 Q4G0J3;D6RFF0;H0YA82 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3145 3 616.625431 1846.85446 77480.91 0.37064 0.00022855 -0.17549 -0.00010821 0.19516 0.00012034 616.959591532454 622.633155554139 20.657 0.20671 20.657 20.585 20.792 0 37 8 6 0 0 0 0.026696 1 7096 31.233 27.199 1 0.69322 0.78294 0 5870100 3076500 2793500 32757 1779 12431 12777 51005 51005 SRPTSEGSDIESTEPQK 17 1 1 Unmodified _SRPTSEGSDIESTEPQK_ 0 0 1 Q4G0J3;D6RFF0;H0YA82 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 616.9606 3 616.625431 1846.85446 78531.45 0.22572 0.00013919 0.4547 0.00028038 0.68042 0.00041956 616.625688082708 622.632723878483 22.999 0.25426 22.999 22.846 23.1 1.9073E-06 44 9 7 0 0 0 0.0098121 1 7616 20.251 18.428 1 0.62292 0.57042 0 1459300 812410 646920 32758 1779 12431 12777 51006 51006 SRPTSEGSDIESTEPQK 17 1 1 Unmodified _SRPTSEGSDIESTEPQK_ 0 0 1 Q4G0J3;D6RFF0;H0YA82 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.6329 3 616.625431 1846.85446 78536.55 0.24147 0.00014889 0.2639 0.00016273 0.50537 0.00031162 616.625470580981 622.633162647244 22.951 0.34183 22.951 22.807 23.149 -1.9073E-06 61 15 6 0 0 0 0.031881 1 7124 15.942 15.942 1 0.57092 0.48376 0 1074500 709500 365000 32759 1779 12431 12777 51007 51007 SSAAEPPPPPPPESAPSK 18 1 0 Acetyl (Protein N-term) _(ac)SSAAEPPPPPPPESAPSK_ 1 0 0 O60264;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.4482 2 892.938699 1783.86284 64276.43 0.33595 0.00029999 0.48165 0.00043009 0.8176 0.00073007 892.939227708835 896.946082081289 58.478 1.0312 58.478 58.013 59.044 -3.8147E-06 434 84 8 0 0 0 1.5545E-05 2 32992 80.522 74.799 1 2.6559 2.859 0 40621000 10584000 30037000 32760 1391 12432 12778 51008;51009 51008 SSAAEPPPPPPPESAPSK 18 1 0 Acetyl (Protein N-term) _(ac)SSAAEPPPPPPPESAPSK_ 1 0 0 O60264;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.9452 2 892.938699 1783.86284 65024.48 0.53374 0.0004766 0.13021 0.00011627 0.66396 0.00059287 892.938816006998 896.945925392125 57.792 0.92036 57.792 57.353 58.274 0 345 74 6 0 0 0 0.00010734 1 33265 53.754 48.475 1 2.4679 2.6963 0 40363000 12297000 28066000 32761 1391 12432 12778 51010 51010 SSADTEFSDECTTAER 16 0 1 Unmodified _SSADTEFSDECTTAER_ 0 0 0 Q6ZMY0;Q9H6S0 Q6ZMY0 Q6ZMY0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.363 2 903.360152 1804.70575 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.17 1 37.17 36.67 37.67 0 0 0 0 2.4905E-12 1 18887 117.2 102 1 32762 1863 12433 12779 51011 51011 SSAQDPQAVLGALGR 15 0 1 Unmodified _SSAQDPQAVLGALGR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;A0A140T954;A2ABF4;A0A0G2JJT9;A0A140T904 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.39 2 735.388979 1468.76341 NaN NaN NaN -0.2702 -0.0001987 NaN NaN NaN NaN 89.944 0.48508 89.944 89.617 90.102 7.6294E-06 0 0 0 0.0033052 1 54306 60.691 52.472 1 NaN NaN 0 9796200 9796200 0 32763 363 12434 12780 51012 51012 SSAQDPQAVLGALGR 15 0 1 Unmodified _SSAQDPQAVLGALGR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;A0A140T954;A2ABF4;A0A0G2JJT9;A0A140T904 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3887 2 735.388979 1468.76341 NaN NaN NaN -0.20548 -0.0001511 NaN NaN NaN NaN 89.098 0.41724 89.098 88.844 89.261 7.6294E-06 0 0 0 0.001407 1 54864 65.842 57.917 1 NaN NaN 0 17865000 17865000 0 32764 363 12434 12780 51013 51013 SSAQDPQAVLGALGR 15 0 1 Unmodified _SSAQDPQAVLGALGR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;A0A140T954;A2ABF4;A0A0G2JJT9;A0A140T904 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.3893 2 735.388979 1468.76341 73833.75 0.62747 0.00046143 -0.95661 -0.00070348 -0.32915 -0.00024205 735.3886593491 740.892852798465 103 0.8063 103 102.79 103.6 0 192 51 7 0 0 0 0.021061 1 58594 30.828 29.074 1 1.2827 1.0796 0 9816600 4238100 5578500 32765 363 12434 12780 51014 51014 SSAQDPQAVLGALGR 15 0 1 Unmodified _SSAQDPQAVLGALGR_ 0 0 0 A0A024RCN6;P26640;A0A140T936;A0A140T954;A2ABF4;A0A0G2JJT9;A0A140T904 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.3888 2 735.388979 1468.76341 71829.83 0.49561 0.00036447 -1.081 -0.00079496 -0.58539 -0.00043049 735.388627148999 740.892722749764 102.87 0.81827 102.87 102.63 103.45 -7.6294E-06 199 54 7 0 0 0 0.00055248 1 57563 55.04 51.395 1 1.9137 1.5891 0 5871800 2667200 3204600 32766 363 12434 12780 51015 51015 SSAVDPEPQVK 11 1 0 Unmodified _SSAVDPEPQVK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.8029 2 578.79586 1155.57717 NaN NaN NaN -2.7306 -0.0015805 NaN NaN NaN NaN 29.582 0.77766 29.582 29.474 30.251 0 0 0 0 1.3948E-23 1 14326 155.84 105.72 1 NaN NaN 0 106970000 0 106970000 32767 1817 12435 12781 51016 51016 SSAVQQLLEK 10 1 0 Unmodified _SSAVQQLLEK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.8156 2 551.808771 1101.60299 79302.53 0.73459 0.00040535 -0.46132 -0.00025456 0.27326 0.00015079 551.80836288611 555.815356548371 67.983 0.70404 67.983 67.628 68.332 0 216 60 5 0 0 0 7.9522E-05 3 39257 98.009 82.394 1 0.71652 0.72312 0 18400000 10249000 8151000 32768 786 12436 12782 51017;51018;51019 51017 SSAVQQLLEK 10 1 0 Unmodified _SSAVQQLLEK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.8085 2 551.808771 1101.60299 81323.42 0.52491 0.00028965 0.18277 0.00010086 0.70769 0.00039051 551.808573302503 555.815916513095 66.728 0.72517 66.728 66.341 67.066 7.6294E-06 218 61 5 0 0 0 4.9482E-06 2 39519 109.02 83.462 1 0.80226 0.85543 0 23196000 12193000 11003000 32769 786 12436 12782 51020;51021 51021 SSAVQQLLEK 10 1 0 Unmodified _SSAVQQLLEK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.8154 2 551.808771 1101.60299 81537.27 0.35312 0.00019485 0.10194 5.625E-05 0.45506 0.00025111 551.80891910517 555.815854207968 78.369 0.85856 78.369 77.979 78.838 0 248 55 6 0 0 0 0.010465 1 41913 53.317 45.096 1 1.3306 1.0529 0 6211700 2625100 3586500 32770 786 12436 12782 51022 51022 SSAVQQLLEK 10 1 0 Unmodified _SSAVQQLLEK_ 0 0 0 A8K9K8;Q9UNQ2;A0A0C4DGB1 A8K9K8 A8K9K8 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.8159 2 551.808771 1101.60299 82050.81 0.55353 0.00030545 0.044571 2.4595E-05 0.59811 0.00033004 551.80885868555 555.81575327168 78.542 0.75108 78.542 78.199 78.95 7.6294E-06 218 49 6 0 0 0 0.0090549 1 41215 55.235 43.188 1 1.2796 1.0457 0 5592100 2385500 3206600 32771 786 12436 12782 51023 51023 SSAVVELDLEGTR 13 0 1 Unmodified _SSAVVELDLEGTR_ 0 0 0 Q4G0J3;D6RFF0;D6RF49;D6RAF3 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.3616 2 688.356813 1374.69907 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.714 1 95.714 95.214 96.214 0 0 0 0 0.0011363 1 53649 76.655 50.141 1 32772 1779 12437 12783 51024 51024 SSAVVVDAIPVFLEK 15 1 0 Unmodified _SSAVVVDAIPVFLEK_ 0 0 0 Q14669 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.4448 2 787.445431 1572.87631 75557.63 0.76833 0.00060502 -0.63734 -0.00050187 0.13099 0.00010315 787.445154440351 791.45215900219 122.45 0.35158 122.45 122.31 122.66 0 63 26 5 0 0 0 0.0068435 1 79290 36.303 36.303 1 2.1047 2.2544 0 3583100 1049800 2533300 32773 1736 12438 12784 51025 51025 SSCPLANSQYATIK 14 1 0 Unmodified _SSCPLANSQYATIK_ 0 0 0 Q9BXY0;H0YBV6;A0PJ56 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.386 2 770.377223 1538.73989 69677.37 0.63827 0.00049171 -0.10641 -8.1977E-05 0.53186 0.00040973 770.377391372358 774.384475612382 59.104 0.6789 59.104 58.874 59.553 -3.8147E-06 315 52 10 0 0 0 0.00017891 2 33534 72.34 63.853 1 0.82641 0.90566 0 52610000 27994000 24616000 32774 2016 12439 12785 51026;51027 51026 SSCPLANSQYATIK 14 1 0 Unmodified _SSCPLANSQYATIK_ 0 0 0 Q9BXY0;H0YBV6;A0PJ56 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.3865 2 770.377223 1538.73989 69254.4 0.49356 0.00038022 -0.051855 -3.9948E-05 0.4417 0.00034028 770.377528378418 774.384575703735 58.051 0.59557 58.051 57.833 58.428 0 273 43 11 0 0 0 1.5063E-29 2 33613 153.95 143.19 1 0.8246 0.92785 0 71146000 37234000 33912000 32775 2016 12439 12785 51028;51029 51029 SSCPLANSQYATIK 14 1 0 Unmodified _SSCPLANSQYATIK_ 0 0 0 Q9BXY0;H0YBV6;A0PJ56 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.3784 2 770.377223 1538.73989 68883.91 0.54394 0.00041904 0.036839 2.838E-05 0.58078 0.00044742 770.377221517185 774.384617922971 69.07 0.82004 69.07 68.836 69.656 0 261 58 6 0 0 0 3.7153E-06 2 36159 101.71 93.487 1 1.235 0.9564 0 13103000 5616500 7486000 32776 2016 12439 12785 51030;51031 51031 SSCPLANSQYATIK 14 1 0 Unmodified _SSCPLANSQYATIK_ 0 0 0 Q9BXY0;H0YBV6;A0PJ56 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 770.3784 2 770.377223 1538.73989 69359.9 0.68862 0.00053049 -0.10424 -8.0304E-05 0.58438 0.00045019 770.377060387412 774.384502103879 69.626 0.7506 69.626 69.401 70.151 7.6294E-06 251 56 5 0 0 0 0.00017235 2 35687 73.273 67.17 1 1.2081 0.99204 0 12333000 4884200 7448500 32777 2016 12439 12785 51032;51033 51033 SSDAFTTQHALR 12 0 1 Unmodified _SSDAFTTQHALR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.3292 2 667.32839 1332.64223 75303.2 0.72973 0.00048697 -0.094079 -6.2782E-05 0.63565 0.00042419 667.32800893943 672.332629339175 31.719 0.88473 31.719 31.26 32.144 0 328 83 5 0 0 0 1.2373E-23 2 15502 162.36 149.83 1 0.86588 0.9204 0 42737000 21933000 20804000 32778 1803 12440 12786 51034;51035 51035 SSDAFTTQHALR 12 0 1 Unmodified _SSDAFTTQHALR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.5573 3 445.221352 1332.64223 92126.26 0.085734 3.817E-05 -0.32627 -0.00014526 -0.24053 -0.00010709 445.221365146848 448.557514478584 30.972 0.66645 30.972 30.519 31.186 0 263 57 6 0 0 0 0.0064516 2 15084 33.751 29.889 1 0.92905 1.0519 0 47884000 21493000 26391000 32779 1803 12440 12786 51036;51037 51036 SSDAFTTQHALR 12 0 1 Unmodified _SSDAFTTQHALR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3073 2 667.32839 1332.64223 75246.77 0.57801 0.00038572 -0.1023 -6.8266E-05 0.47571 0.00031745 667.327996833916 672.332543514726 30.97 0.68708 30.97 30.499 31.186 0 298 59 7 0 0 0 0.041066 1 15009 54.259 44.925 1 0.90977 1.0552 0 65276000 36088000 29188000 32780 1803 12440 12786 51038 51038 SSDAFTTQHALR 12 0 1 Unmodified _SSDAFTTQHALR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.3328 2 667.32839 1332.64223 74528.27 0.3366 0.00022462 0.22584 0.00015071 0.56244 0.00037533 667.328406097105 672.332693505358 36.341 1.0789 36.341 35.568 36.647 0 456 92 7 0 0 0 0.00020732 2 16195 80.24 80.24 1 1.5092 1.2342 0 13662000 5060000 8602400 32781 1803 12440 12786 51039;51040 51039 SSDAFTTQHALR 12 0 1 Unmodified _SSDAFTTQHALR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.5576 3 445.221352 1332.64223 89738.95 -0.18026 -8.0255E-05 0.0031662 1.4096E-06 -0.17709 -7.8845E-05 445.221375852793 448.55761059379 36.317 1.0679 36.317 35.568 36.636 -3.8147E-06 382 91 6 0 0 0 0.0054033 1 16246 40.725 37.938 1 1.5169 1.2978 0 8703600 3287400 5416100 32782 1803 12440 12786 51041 51041 SSDAFTTQHALR 12 0 1 Unmodified _SSDAFTTQHALR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.3326 2 667.32839 1332.64223 74426.75 0.51681 0.00034488 -0.046304 -3.09E-05 0.47051 0.00031398 667.328306726696 672.332507087962 36.344 1.0799 36.344 35.601 36.68 0 390 95 7 0 0 0 1.7832E-22 2 15734 151.07 141.12 1 1.4521 1.2168 0 16663000 6252200 10410000 32783 1803 12440 12786 51042;51043 51042 SSDAFTTQHALR 12 0 1 Unmodified _SSDAFTTQHALR_ 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 448.5573 3 445.221352 1332.64223 90623.37 0.052444 2.3349E-05 -0.26365 -0.00011738 -0.21121 -9.4036E-05 445.221220906847 448.557439946783 36.324 0.75308 36.324 35.882 36.635 0 303 67 6 0 0 0 0.0038891 1 15756 57.164 55.331 1 1.5081 1.2248 0 10032000 4296200 5735800 32784 1803 12440 12786 51044 51044 SSDESNFDVPPR 12 0 1 Unmodified _SSDESNFDVPPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.3063 2 675.302038 1348.58952 74622.77 0.77781 0.00052526 -0.45775 -0.00030912 0.32007 0.00021614 675.301001531579 680.306043296158 48.573 0.61463 48.573 48.14 48.754 -3.8147E-06 150 47 5 0 0 0 3.1476E-08 1 26645 118.28 111.06 1 1.033 1.0757 0 21770000 10488000 11282000 32785 1471 12441 12787 51045 51045 SSDESNFDVPPR 12 0 1 Unmodified _SSDESNFDVPPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.302 2 675.302038 1348.58952 74103.95 0.81391 0.00054964 -0.42494 -0.00028696 0.38897 0.00026267 675.300841286758 680.306234830804 48.865 0.41596 48.865 48.598 49.014 -3.8147E-06 104 31 6 0 0 0 5.4566E-18 1 26712 144.77 139.8 1 0.95888 0.99809 0 21875000 11068000 10807000 32786 1471 12441 12787 51046 51046 SSDESNFDVPPR 12 0 1 Unmodified _SSDESNFDVPPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.2874 2 675.302038 1348.58952 74450.2 0.69571 0.00046982 -0.31959 -0.00021582 0.37612 0.000254 675.301427017045 680.305979380557 49.286 0.83197 49.286 48.989 49.821 -3.8147E-06 228 55 6 0 0 0 1.4561E-05 1 27140 103.26 95.33 1 1.0681 1.0859 0 27549000 12520000 15029000 32787 1471 12441 12787 51047 51047 SSDESNFDVPPR 12 0 1 Unmodified _SSDESNFDVPPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.301 2 675.302038 1348.58952 NaN NaN NaN -0.2318 -0.00015654 NaN NaN NaN NaN 47.538 1.1411 47.538 47.011 48.152 0 0 0 0 2.2427E-05 1 26297 100.69 91.473 1 NaN NaN 0 15448000 15448000 0 32788 1471 12441 12787 51048 51048 SSDESNFDVPPR 12 0 1 Unmodified _SSDESNFDVPPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.307 2 675.302038 1348.58952 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.115 1 47.115 46.615 47.615 0 0 0 0 1.0215E-06 1 26114 100.48 88.251 1 32789 1471 12441 12787 51049 51049 SSDESNFDVPPR 12 0 1 Unmodified _SSDESNFDVPPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.8079 2 675.302038 1348.58952 73757.13 0.6177 0.00041714 -0.35114 -0.00023713 0.26656 0.00018001 675.301544208716 680.306068104351 56.207 2.0851 56.206 55.136 57.221 -3.8147E-06 388 136 4 0 0 0 0.00090263 4 28181 64.103 64.103 1 0.96848 0.80975 0 3637700 1977900 1659800 32790 1471 12441 12787 51050;51051;51052;51053 51050 SSDESNFDVPPR 12 0 1 Unmodified _SSDESNFDVPPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.3023 2 675.302038 1348.58952 74394.58 0.66098 0.00044636 -0.35077 -0.00023688 0.31021 0.00020948 675.301618952902 680.305983327923 56.857 1.7978 56.857 56.004 57.802 0 465 124 5 0 0 0 0.013437 2 27866 44.299 44.299 1 1.0095 0.85745 0 3110700 1326700 1784000 32791 1471 12441 12787 51054;51055 51055 SSDQPLTVPVSPK 13 1 0 Unmodified _SSDQPLTVPVSPK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.8698 2 677.864274 1353.714 73617.96 0.77943 0.00052835 -0.20837 -0.00014125 0.57105 0.0003871 677.863983472694 681.871033048473 67.701 0.70423 67.701 67.352 68.056 0 326 59 8 0 0 0 0.00036656 2 39052 62.408 62.408 1 0.86548 0.95326 0 55393000 29334000 26059000 32792 1837 12442 12788 51056;51057 51057 SSDQPLTVPVSPK 13 1 0 Unmodified _SSDQPLTVPVSPK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8647 2 677.864274 1353.714 73141.6 0.63385 0.00042967 0.047005 3.1863E-05 0.68086 0.00046153 677.864244749899 681.871297471897 66.621 0.62717 66.621 66.298 66.925 0 278 51 8 0 0 0 0.00013042 2 39260 90.05 90.05 1 0.87516 0.97811 0 97645000 51238000 46407000 32793 1837 12442 12788 51058;51059 51058 SSDQPLTVPVSPK 13 1 0 Unmodified _SSDQPLTVPVSPK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.8714 2 677.864274 1353.714 73622.25 0.43141 0.00029244 0.18903 0.00012814 0.62044 0.00042058 677.86433588671 681.871362153213 77.173 0.72987 77.173 76.881 77.611 0 288 50 8 0 0 0 0.0020343 1 41236 55.401 55.401 1 1.3478 1.0872 0 22481000 9324400 13157000 32794 1837 12442 12788 51060 51060 SSDQPLTVPVSPK 13 1 0 Unmodified _SSDQPLTVPVSPK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 677.8651 2 677.864274 1353.714 73868.86 0.60677 0.00041131 0.072993 4.948E-05 0.67977 0.00046079 677.864256432396 681.871207336627 77.487 0.75693 77.487 77.166 77.923 0 285 49 8 0 0 0 0.00073528 2 40562 60.691 60.691 1 1.3377 1.0704 0 21436000 9605100 11831000 32795 1837 12442 12788 51061;51062 51061 SSEAVIWEVLR 11 0 1 Unmodified _SSEAVIWEVLR_ 0 0 0 Q5H909;A0A024R9Y7;Q9UNF1;Q5H907;B4DX55;B4DWM5 Q5H909 Q5H909 MAGED2 Melanoma-associated antigen D2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8481 2 644.848427 1287.6823 NaN NaN NaN -0.21982 -0.00014175 NaN NaN NaN NaN 114.71 0.48154 114.71 114.51 114.99 0 0 0 0 0.0029048 1 72771 70.1 52.281 1 NaN NaN 0 1878400 1878400 0 32796 292 12443 12789 51063 51063 SSEAVIWEVLR 11 0 1 Unmodified _SSEAVIWEVLR_ 0 0 0 Q5H909;A0A024R9Y7;Q9UNF1;Q5H907;B4DX55;B4DWM5 Q5H909 Q5H909 MAGED2 Melanoma-associated antigen D2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.8524 2 644.848427 1287.6823 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.74 1 114.74 114.24 115.24 0 0 0 0 1.6171E-05 1 72879 91.867 72.08 1 32797 292 12443 12789 51064 51064 SSEEIESAFR 10 0 1 Unmodified _SSEEIESAFR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;A0A0D9SFH4 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.7686 2 577.769842 1153.52513 79870.13 0.57016 0.00032942 -0.16162 -9.3381E-05 0.40853 0.00023604 578.271281704793 582.77347810828 53.671 0.63729 53.671 53.332 53.97 -3.8147E-06 137 50 4 0 0 0 3.7597E-08 1 30043 118.33 90.116 1 1.3018 1.3094 0 17369000 8846500 8522200 32798 523 12444 12790 51065 51065 SSEEIESAFR 10 0 1 Unmodified _SSEEIESAFR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;A0A0D9SFH4 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.7738 2 577.769842 1153.52513 79048.16 0.74245 0.00042897 -0.35497 -0.00020509 0.38748 0.00022387 577.769131420635 582.773654546841 52.352 0.60518 52.352 51.992 52.597 0 198 45 6 0 0 0 4.8926E-08 2 29735 116.05 87.832 1 1.4961 1.532 0 20958000 8807700 12150000 32799 523 12444 12790 51066;51067 51067 SSEGSAHNVAYPGIPK 16 1 0 Unmodified _SSEGSAHNVAYPGIPK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.6021 3 538.602121 1612.78453 83308.84 1.0607 0.00057129 -0.19823 -0.00010677 0.86247 0.00046453 538.60193581046 541.607815498299 43.287 0.43709 43.287 43.08 43.517 0 127 36 5 0 0 0 0.030408 1 23455 19.664 15.195 1 0.71792 0.71756 0 15277000 8043900 7233200 32800 1680 12445 12791 51068 51068 SSEGSAHNVAYPGIPK 16 1 0 Unmodified _SSEGSAHNVAYPGIPK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.4018 2 807.399544 1612.78453 68039.04 1.0343 0.00083505 0.10633 8.5854E-05 1.1406 0.00092091 807.399281705832 811.407027715731 43.305 0.19678 43.305 43.153 43.35 0 31 17 4 0 0 0 0.023864 1 23469 35.204 20.785 1 0.90096 0.91414 0 9096800 5034800 4061900 32801 1680 12445 12791 51069 51069 SSEGSAHNVAYPGIPK 16 1 0 Unmodified _SSEGSAHNVAYPGIPK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.4078 2 807.399544 1612.78453 70196.38 0.27682 0.0002235 0.22238 0.00017955 0.4992 0.00040305 807.400150599541 811.406842156125 51.895 0.41914 51.895 51.606 52.025 -3.8147E-06 76 34 4 0 0 0 0.054793 1 25548 22.578 7.8874 1 1.6212 1.3645 0 1580800 553840 1027000 32802 1680 12445 12791 51070 51070 SSELQAIK 8 1 0 Unmodified _SSELQAIK_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 438.2448 2 438.245275 874.475997 91112.5 -0.32629 -0.000143 0.27164 0.00011904 -0.054656 -2.3953E-05 438.245096356567 442.252080002884 36.199 0.3974 36.199 35.969 36.367 3.8147E-06 108 34 5 0 0 0 0.023819 1 16188 56.27 26.894 1 0.62214 0.4912 0 5308500 3100700 2207800 32803 741 12446 12792 51071 51071 SSELQAIK 8 1 0 Unmodified _SSELQAIK_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 438.2448 2 438.245275 874.475997 94257.17 0.035636 1.5617E-05 -0.10486 -4.5954E-05 -0.069224 -3.0337E-05 438.244996391197 442.252021018093 36.049 0.32894 36.049 35.882 36.211 0 101 28 6 0 0 0 0.031359 1 15663 51.335 20.723 1 0.64973 0.53289 0 5311500 3121200 2190300 32804 741 12446 12792 51072 51072 SSENILTVHEQANVESLK 18 1 0 Unmodified _SSENILTVHEQANVESLK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.011 3 666.676126 1997.00655 74316.9 0.38463 0.00025642 0.40231 0.00026821 0.78693 0.00052463 667.01090179834 669.347055419087 72.574 1.0166 72.574 71.89 72.907 0 317 75 8 0 0 0 5.6672E-06 2 42350 73.809 73.809 1 0.97759 1.1074 0 154700000 76336000 78364000 32805 1813 12447 12793 51073;51074 51073 SSENILTVHEQANVESLK 18 1 0 Unmodified _SSENILTVHEQANVESLK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1004.0192 2 999.510551 1997.00655 61111.71 0.1066 0.00010655 0.51497 0.00051471 0.62157 0.00062126 1000.0123701134 1004.01919441912 72.598 0.37212 72.598 72.35 72.723 0 105 25 6 0 0 0 3.0857E-05 3 42429 81.311 81.311 1 0.91259 0.89446 0 20988000 11202000 9785900 32806 1813 12447 12793 51075;51076;51077 51077 SSENILTVHEQANVESLK 18 1 0 Unmodified _SSENILTVHEQANVESLK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.6765 3 666.676126 1997.00655 74411.6 0.39146 0.00026097 0.16474 0.00010983 0.5562 0.0003708 667.010726741877 669.346941547272 71.212 0.71291 71.212 70.833 71.546 0 282 52 9 0 0 0 8.2435E-06 1 42526 68.41 68.41 1 1.0377 1.2029 0 215870000 103960000 111910000 32807 1813 12447 12793 51078 51078 SSENILTVHEQANVESLK 18 1 0 Unmodified _SSENILTVHEQANVESLK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 999.5116 2 999.510551 1997.00655 61616.34 0.24845 0.00024833 0.30944 0.00030929 0.5579 0.00055762 999.510968187469 1003.51803191349 71.216 0.36517 71.216 71.04 71.406 0 117 25 7 0 0 0 3.2257E-30 2 42619 137.39 137.39 1 0.98955 0.99865 0 26885000 13518000 13367000 32808 1813 12447 12793 51079;51080 51080 SSENILTVHEQANVESLK 18 1 0 Unmodified _SSENILTVHEQANVESLK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.6824 3 666.676126 1997.00655 73655.66 0.48071 0.00032047 0.11069 7.3792E-05 0.59139 0.00039427 666.676100558856 669.347523845258 83.414 0.61263 83.414 83.16 83.773 0 291 40 11 0 0 0 3.5974E-05 3 45452 49.066 49.066 1 1.5862 1.3233 0 48854000 17383000 31471000 32809 1813 12447 12793 51081;51082;51083 51083 SSENILTVHEQANVESLK 18 1 0 Unmodified _SSENILTVHEQANVESLK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1003.5176 2 999.510551 1997.00655 61900.33 0.17574 0.00017566 0.34475 0.00034459 0.5205 0.00052024 1000.0122656575 1004.01954965274 83.44 0.50827 83.44 83.241 83.749 0 149 33 7 0 0 0 0.002133 1 45429 35.836 35.836 1 1.6542 1.3285 0 7935100 3009100 4926000 32810 1813 12447 12793 51084 51084 SSENILTVHEQANVESLK 18 1 0 Unmodified _SSENILTVHEQANVESLK_ 0 0 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.3474 3 666.676126 1997.00655 74016.66 0.66119 0.0004408 -0.10951 -7.3006E-05 0.55168 0.00036779 667.010446827159 669.347340736571 83.477 0.69768 83.477 83.053 83.751 0 238 38 11 0 0 0 6.4684E-07 2 44692 85.937 85.937 1 1.4727 1.2442 0 57223000 20956000 36267000 32811 1813 12447 12793 51085;51086 51086 SSENNSLNPEVMR 13 0 1 Oxidation (M) _SSENNSLNPEVM(ox)R_ SSENNSLNPEVM(1)R SSENNSLNPEVM(81.52)R 0 1 0 Q9Y232;C9JQG7 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.8432 2 746.838462 1491.66237 74654.25 0.9792 0.0007313 -0.66615 -0.00049751 0.31305 0.0002338 746.837973182148 752.343403269159 31.315 0.60772 31.315 30.979 31.586 0 114 55 4 0 0 0 6.7035E-05 2 15437 81.525 72.336 1 1.4633 1.5249 0 13379000 6192400 7186700 32812 2121 12448 12794 51087;51088 51088 1950 SSENNSLNPEVMR 13 0 1 Oxidation (M) _SSENNSLNPEVM(ox)R_ SSENNSLNPEVM(1)R SSENNSLNPEVM(63.41)R 0 1 0 Q9Y232;C9JQG7 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.3574 2 746.838462 1491.66237 73956.95 0.60581 0.00045244 -0.29147 -0.00021768 0.31434 0.00023476 746.838079288209 751.842520617014 30.766 0.48417 30.766 30.545 31.029 0 132 41 4 0 0 0 0.00016762 2 15016 63.408 48.989 1 1.4607 1.4444 0 15221000 5917700 9303000 32813 2121 12448 12794 51089;51090 51089 1950 SSENPNEVFR 10 0 1 Unmodified _SSENPNEVFR_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.7803 2 589.775459 1177.53637 NaN NaN NaN 0.15937 9.3992E-05 NaN NaN NaN NaN 38.415 0.61169 38.415 38.218 38.83 0 0 0 0 0.0052748 2 19673 69.375 52.835 1 NaN NaN 0 19537000 0 19537000 32814 613 12449 12795 51091;51092 51091 SSENPNEVFR 10 0 1 Unmodified _SSENPNEVFR_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.7798 2 589.775459 1177.53637 NaN NaN NaN 0.38137 0.00022492 NaN NaN NaN NaN 37.612 0.55166 37.612 37.381 37.933 0 0 0 0 2.817E-08 1 19491 116.05 83.696 1 NaN NaN 0 20514000 0 20514000 32815 613 12449 12795 51093 51093 SSEPVVIMK 9 1 0 Oxidation (M) _SSEPVVIM(ox)K_ SSEPVVIM(1)K SSEPVVIM(100.45)K 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.275 2 503.267893 1004.52123 85662.48 0.2447 0.00012315 0.1659 8.3492E-05 0.4106 0.00020664 503.268018881128 507.274959323719 34.323 0.9246 34.323 33.776 34.7 0 239 81 4 0 0 0 0.00017909 2 16975 100.45 96.879 1 2.3607 2.6608 0 114140000 36765000 77371000 32816 1569 12450 12796 51094;51095 51094 1344 SSEPVVIMK 9 1 0 Oxidation (M) _SSEPVVIM(ox)K_ SSEPVVIM(1)K SSEPVVIM(96.25)K 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.2753 2 503.267893 1004.52123 84254.18 0.27738 0.00013959 0.14378 7.2362E-05 0.42116 0.00021196 503.268222616519 507.275042388754 33.798 0.89278 33.798 33.321 34.214 0 369 71 7 0 0 0 0.00031609 2 16822 96.253 91.022 1 2.3653 2.7291 0 188540000 57747000 130800000 32817 1569 12450 12796 51096;51097 51096 1344 SSEPVVIMK 9 1 0 Oxidation (M) _SSEPVVIM(ox)K_ SSEPVVIM(1)K SSEPVVIM(57.18)K 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 503.268 2 503.267893 1004.52123 86495.41 0.16548 8.3279E-05 -0.30011 -0.00015104 -0.13464 -6.7758E-05 503.267970727442 507.275102032707 39.117 0.90557 39.117 38.707 39.613 0 300 74 6 0 0 0 0.0061872 2 17727 57.177 57.177 1 2.0678 1.6352 0 10546000 3320800 7225600 32818 1569 12450 12796 51098;51099 51099 1344 SSEPVVIMK 9 1 0 Oxidation (M) _SSEPVVIM(ox)K_ SSEPVVIM(1)K SSEPVVIM(77.06)K 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 503.2677 2 503.267893 1004.52123 84668.45 0.055425 2.7894E-05 -0.019755 -9.942E-06 0.03567 1.7952E-05 503.268010475047 507.275131517465 39.06 0.847 39.06 38.718 39.565 0 252 64 5 0 0 0 0.0010075 1 17273 77.058 73.123 1 2.1079 1.7249 0 8443800 2805800 5638100 32819 1569 12450 12796 51100 51100 1344 SSEPVVIMK 9 1 0 Unmodified _SSEPVVIMK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.2778 2 495.270435 988.526318 86200.23 0.20384 0.00010095 0.40544 0.0002008 0.60928 0.00030176 495.270426851349 499.277556373015 61.537 0.81109 61.537 61.161 61.972 0 280 66 6 0 0 0 0.0011603 2 31508 89.142 85.208 1 3.1569 2.4937 0 10655000 2637200 8018100 32820 1569 12450 12797 51101;51102 51101 SSEPVVIMK 9 1 0 Unmodified _SSEPVVIMK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2698 2 495.270435 988.526318 85547.67 -0.024923 -1.2343E-05 0.38037 0.00018839 0.35545 0.00017604 495.270332625853 499.277572772385 61.859 0.90776 61.859 61.466 62.373 -3.8147E-06 294 69 6 0 0 0 0.043141 2 30967 40.778 37.102 1 3.226 2.6622 0 11218000 2642100 8575500 32821 1569 12450 12797 51103;51104 51104 SSEPVVTMSVEYQMK 15 1 0 2 Oxidation (M) _SSEPVVTM(ox)SVEYQM(ox)K_ SSEPVVTM(1)SVEYQM(1)K SSEPVVTM(44.3)SVEYQM(44.3)K 0 2 0 P18583;D3DSF7;B3KRA1 P18583 P18583 SON Protein SON ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.9072 2 873.89987 1745.78519 NaN NaN NaN 0.30343 0.00026517 NaN NaN NaN NaN 52.037 0.39347 52.037 51.855 52.248 3.8147E-06 0 0 0 0.0033502 1 28925 44.299 37.64 1 NaN NaN 0 5472400 0 5472400 32822 1499 12451 12798 51105 51105 1255;1256 SSEQILATLK 10 1 0 Unmodified _SSEQILATLK_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.3109 2 545.311146 1088.60774 82635.43 0.21641 0.00011801 -0.37217 -0.00020295 -0.15576 -8.4939E-05 545.311260416602 549.318340496887 72.374 0.75941 72.374 71.89 72.649 0 245 56 8 0 0 0 1.2004E-16 2 42311 160.36 111.8 1 1.3367 1.4989 0 65715000 26743000 38973000 32823 2114 12452 12799 51106;51107 51106 SSEQILATLK 10 1 0 Unmodified _SSEQILATLK_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.3113 2 545.311146 1088.60774 81424.92 0.40044 0.00021836 -1.258 -0.00068598 -0.85752 -0.00046761 545.311129063689 549.818032027215 71.086 0.5378 71.086 70.787 71.325 0 224 39 9 0 0 0 1.5175E-09 2 42486 131.5 89.851 1 1.8273 2.0417 0 88644000 32568000 56076000 32824 2114 12452 12799 51108;51109 51108 SSEQILATLK 10 1 0 Unmodified _SSEQILATLK_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.3188 2 545.311146 1088.60774 83785.29 0.47876 0.00026107 -0.51109 -0.0002787 -0.032332 -1.7631E-05 545.311102789475 549.318165454531 83.029 0.46568 83.029 82.743 83.209 0 175 27 9 0 0 0 0.011842 2 45115 51.445 33.008 1 1.2863 1.0299 0 8583100 4129100 4454000 32825 2114 12452 12799 51110;51111 51110 SSEQILATLK 10 1 0 Unmodified _SSEQILATLK_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.3182 2 545.311146 1088.60774 82397.95 0.53698 0.00029282 -0.38862 -0.00021192 0.14837 8.0905E-05 545.3110355735 549.318779705016 83.135 0.8492 83.135 82.728 83.577 -7.6294E-06 205 48 8 0 0 0 6.5908E-06 2 44431 107.79 62.706 1 1.1537 0.94016 0 6647800 3327500 3320200 32826 2114 12452 12799 51112;51113 51113 SSFADISNLLQIEPR 15 0 1 Unmodified _SSFADISNLLQIEPR_ 0 0 0 Q15785;B4DXU3;Q6ZPD0 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.4488 2 845.443951 1688.87335 NaN NaN NaN 0.17085 0.00014445 NaN NaN NaN NaN 125.11 0.40988 125.11 124.92 125.33 0 0 0 0 1.8852E-16 1 81368 129.34 120.83 1 NaN NaN 0 5961600 0 5961600 32827 1765 12453 12800 51114 51114 SSFADISNLLQIEPR 15 0 1 Unmodified _SSFADISNLLQIEPR_ 0 0 0 Q15785;B4DXU3;Q6ZPD0 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.9507 2 845.443951 1688.87335 NaN NaN NaN -0.020439 -1.728E-05 NaN NaN NaN NaN 124.79 0.43684 124.79 124.57 125 0 0 0 0 2.883E-11 1 83065 117.2 101.31 1 NaN NaN 0 7903800 0 7903800 32828 1765 12453 12800 51115 51115 SSFANVAAATPAIK 14 1 0 Unmodified _SSFANVAAATPAIK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.8669 2 674.366984 1346.71942 72625.38 0.52747 0.00035571 -0.46986 -0.00031685 0.057611 3.8851E-05 674.366958249672 678.373654043391 77.944 0.83436 77.944 77.376 78.21 -7.6294E-06 272 65 8 0 0 0 0.00013741 2 45988 78.903 68.594 1 1.0251 1.0943 0 32118000 17619000 14500000 32829 2002 12454 12801 51116;51117 51117 SSFANVAAATPAIK 14 1 0 Unmodified _SSFANVAAATPAIK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.3746 2 674.366984 1346.71942 74002.63 0.34627 0.00023351 0.09753 6.5771E-05 0.4438 0.00029928 674.367077943211 678.374142834385 89.349 1.1038 89.349 88.863 89.967 0 238 69 8 0 0 0 0.00019023 2 48493 70.728 70.728 1 1.8516 1.5269 0 12045000 4569900 7475500 32830 2002 12454 12801 51118;51119 51119 SSFDWLTGSSTDPLVDHTSPSSDSLLFAHK 30 1 0 Unmodified _SSFDWLTGSSTDPLVDHTSPSSDSLLFAHK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.6378 4 809.386102 3233.5153 66177.72 0.67951 0.00054998 0.30116 0.00024375 0.98066 0.00079374 809.637305959504 811.640591723207 127.55 0.60541 127.55 127.33 127.93 0 204 23 14 0 0 0 0.0014703 1 76838 28.46 28.46 1 0.36904 0.30211 0 35304000 23999000 11305000 32831 1665 12455 12802 51120 51120 SSFLPSYIIDVR 12 0 1 Unmodified _SSFLPSYIIDVR_ 0 0 0 D3DWL9;Q10570;B4DEF4 D3DWL9 D3DWL9 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.8812 2 698.877185 1395.73982 76795.09 0.70576 0.00049324 -0.55924 -0.00039084 0.14653 0.0001024 699.378115160282 703.88115339774 117.27 0.42786 117.27 117.04 117.47 -7.6294E-06 87 25 5 0 0 0 0.0051179 1 76884 51.762 38.171 1 1.3567 1.3681 0 6247900 2708200 3539700 32832 1198 12456 12803 51121 51121 SSFQVQLASNPVLDAWYGAR 20 0 1 Unmodified _SSFQVQLASNPVLDAWYGAR_ 0 0 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1105.557 2 1105.05546 2208.09637 59025.64 0.33318 0.00036818 0.98536 0.0010889 1.3185 0.0014571 1105.55781976663 1110.56187292094 125.5 0.34717 125.5 125.33 125.67 7.6294E-06 77 24 5 0 0 0 1.2865E-06 1 83597 75.669 75.669 1 0.93916 0.94748 0 6029400 3428100 2601300 32833 2045 12457 12804 51122 51122 SSFSITR 7 0 1 Unmodified _SSFSITR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.2114 2 399.211235 796.407917 NaN NaN NaN 0.4535 0.00018104 NaN NaN NaN NaN 37.649 0.74047 37.649 37.293 38.034 0 0 0 0 0.0045621 1 19223 114.72 31.344 1 NaN NaN 0 18102000 18102000 0 32834 2128 12458 12805 51123 51123 SSFSSDPDESEGIPLK 16 1 0 Unmodified _SSFSSDPDESEGIPLK_ 0 0 0 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 851.8987 2 847.891414 1693.76828 65063.92 0.85322 0.00072344 -0.14232 -0.00012067 0.7109 0.00060277 847.891454841794 851.898358085867 75.319 0.80552 75.319 74.97 75.776 0 352 67 9 0 0 0 1.4832E-12 3 44153 122.34 122.34 1 2.6527 2.9922 0 131970000 39114000 92854000 32835 1864 12459 12806 51124;51125;51126 51125 SSFSSDPDESEGIPLK 16 1 0 Unmodified _SSFSSDPDESEGIPLK_ 0 0 0 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 851.8978 2 847.891414 1693.76828 64435.08 0.81691 0.00069265 0.21331 0.00018086 1.0302 0.00087351 847.892201503846 851.89829366455 74.32 0.72187 74.32 73.98 74.702 0 345 62 10 0 0 0 3.7564E-12 2 44581 117.79 117.79 1 2.8818 3.2215 0 102470000 31306000 71167000 32836 1864 12459 12806 51127;51128 51128 SSFSSDPDESEGIPLK 16 1 0 Unmodified _SSFSSDPDESEGIPLK_ 0 0 0 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 848.3925 2 847.891414 1693.76828 65406.97 0.61268 0.00051949 0.30176 0.00025586 0.91444 0.00077535 847.892497266818 851.898452294201 86.096 0.89499 86.096 85.723 86.618 0 358 61 9 0 0 0 0.00021564 2 47080 59.155 59.155 1 5.0011 4.1224 0 41316000 7159400 34157000 32837 1864 12459 12806 51129;51130 51130 SSFSSDPDESEGIPLK 16 1 0 Unmodified _SSFSSDPDESEGIPLK_ 0 0 0 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 847.8938 2 847.891414 1693.76828 63835.04 0.62585 0.00053066 0.03233 2.7412E-05 0.65818 0.00055807 847.89226258715 851.898130094533 86.256 0.80843 86.256 85.932 86.741 0 272 46 11 0 0 0 0.00015222 2 46534 65.295 65.295 1 4.8727 4.0589 0 40258000 7051300 33207000 32838 1864 12459 12806 51131;51132 51132 SSFYPDGGDQETAK 14 1 0 Unmodified _SSFYPDGGDQETAK_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7;H0YF00 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.3319 2 751.32571 1500.63687 70299.37 0.61295 0.00046052 0.30265 0.00022739 0.9156 0.00068791 751.325746229164 755.332681229664 39.436 0.76004 39.436 38.992 39.752 0 280 62 8 0 0 0 0.00010345 3 20397 84.658 84.658 1 1.1903 1.3334 0 64599000 29341000 35257000 32839 2083 12460 12807 51133;51134;51135 51134 SSFYPDGGDQETAK 14 1 0 Unmodified _SSFYPDGGDQETAK_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7;H0YF00 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.8352 2 751.32571 1500.63687 70158.28 0.6451 0.00048468 0.068655 5.1583E-05 0.71376 0.00053626 751.325837296859 755.332750213828 38.462 0.49622 38.462 38.266 38.763 0 273 42 8 0 0 0 0.00066673 2 20109 59.198 55.311 1 1.0875 1.2157 0 103160000 46572000 56583000 32840 2083 12460 12807 51136;51137 51137 SSFYPDGGDQETAK 14 1 0 Unmodified _SSFYPDGGDQETAK_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7;H0YF00 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.3265 2 751.32571 1500.63687 70785.06 0.66162 0.00049709 0.15374 0.00011551 0.81536 0.0006126 751.325515201808 755.332329486642 45.45 0.83092 45.45 45.234 46.065 0 258 54 8 0 0 0 0.0029376 2 21188 47.991 47.991 1 1.2677 1.0444 0 10665000 4469100 6196000 32841 2083 12460 12807 51138;51139 51139 SSGAASSAPGGGDGAEYK 18 1 0 Unmodified _SSGAASSAPGGGDGAEYK_ 0 0 0 A0A087WWP4;Q96T37 A0A087WWP4 A0A087WWP4 RBM15 Putative RNA-binding protein 15 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.852 2 784.844798 1567.67504 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.242 1 20.242 19.742 20.742 0 0 0 0 1.5183E-06 1 6702 85.845 77.625 1 32842 427 12461 12808 51140 51140 SSGAASSAPGGGDGAEYK 18 1 0 Unmodified _SSGAASSAPGGGDGAEYK_ 0 0 0 A0A087WWP4;Q96T37 A0A087WWP4 A0A087WWP4 RBM15 Putative RNA-binding protein 15 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.853 2 784.844798 1567.67504 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.228 1 20.228 19.728 20.728 0 0 0 0 0.028014 1 6537 40.725 31.292 1 32843 427 12461 12808 51141 51141 SSGASVTTQPTEFK 14 1 0 Unmodified _SSGASVTTQPTEFK_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3566 2 720.354271 1438.69399 74539.01 0.85021 0.00061246 -0.25485 -0.00018358 0.59536 0.00042887 720.354285496504 724.862833205271 42.902 0.42433 42.902 42.628 43.052 0 89 34 6 0 0 0 8.5112E-30 2 22821 157.97 141.3 1 1.0458 1.0667 0 10421000 7116900 3303700 32844 1063 12462 12809 51142;51143 51142 SSGASVTTQPTEFK 14 1 0 Unmodified _SSGASVTTQPTEFK_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.3548 2 720.354271 1438.69399 71540.3 0.60963 0.00043915 -0.78548 -0.00056582 -0.17584 -0.00012667 720.354042873852 724.361264487753 49.909 0.62689 49.909 49.609 50.236 0 276 53 7 0 0 0 0.00019192 1 24367 70.488 61.3 1 0.95516 0.76228 0 6902200 3243400 3658700 32845 1063 12462 12809 51144 51144 SSGASVTTQPTEFK 14 1 0 Unmodified _SSGASVTTQPTEFK_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.3547 2 720.354271 1438.69399 71528.42 0.38131 0.00027467 -0.39184 -0.00028226 -0.010536 -7.5898E-06 720.354377248606 724.361492695122 50.237 0.70577 50.237 49.929 50.635 0 304 58 7 0 0 0 0.0037659 2 24012 46.592 42.947 1 0.94537 0.77024 0 6697300 3439900 3257400 32846 1063 12462 12809 51145;51146 51146 SSGEIVYCGQVFEK 14 1 0 Unmodified _SSGEIVYCGQVFEK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.8844 2 801.877056 1601.73956 67013.63 0.91841 0.00073645 -0.15387 -0.00012338 0.76454 0.00061307 801.877087329528 805.884025300625 75.805 0.94168 75.805 75.427 76.369 0 556 79 10 0 0 0 7.4152E-05 2 44428 89.403 75.246 1 0.83114 0.98211 0 388860000 204910000 183950000 32847 1003 12463 12810 51147;51148 51148 SSGEIVYCGQVFEK 14 1 0 Unmodified _SSGEIVYCGQVFEK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.3787 2 801.877056 1601.73956 66971.55 0.57946 0.00046466 -0.015634 -1.2537E-05 0.56383 0.00045212 801.87706869488 805.884181200533 74.748 0.89704 74.748 74.406 75.303 0 531 79 10 0 0 0 3.0841E-14 2 44837 128.01 128.01 1 0.84703 0.99727 0 454750000 248120000 206630000 32848 1003 12463 12810 51149;51150 51150 SSGEIVYCGQVFEK 14 1 0 Unmodified _SSGEIVYCGQVFEK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 806.3862 2 801.877056 1601.73956 66338.66 0.50314 0.00040346 0.043173 3.4619E-05 0.54632 0.00043808 801.877247990386 805.884243146013 86.89 1.2594 86.89 86.501 87.761 0 472 74 11 0 0 0 2.0984E-06 2 47566 106.49 97.488 1 1 0.86224 0 99322000 49306000 50016000 32849 1003 12463 12810 51151;51152 51151 SSGEIVYCGQVFEK 14 1 0 Unmodified _SSGEIVYCGQVFEK_ 0 0 0 M0R117;B4DM74;Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7 M0R117 M0R117 RPL18A 60S ribosomal protein L18a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.3858 2 801.877056 1601.73956 65263.16 0.52185 0.00041846 0.025434 2.0395E-05 0.54729 0.00043886 801.877307611121 805.884240612529 86.997 1.2804 86.997 86.619 87.899 0 516 77 11 0 0 0 0.00019192 2 46825 70.488 64.517 1 0.99737 0.84863 0 81633000 40159000 41474000 32850 1003 12463 12810 51153;51154 51153 SSGLTAVWVAR 11 0 1 Unmodified _SSGLTAVWVAR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.8212 2 573.81693 1145.61931 81622.9 1.0144 0.00058211 0.030379 1.7432E-05 1.0448 0.00059954 573.816673059562 578.820954255966 84.318 0.49943 84.318 84.049 84.549 0 119 37 4 0 0 0 0.00022163 1 50483 91.867 79.279 1 1.2461 1.2899 0 23187000 12238000 10949000 32851 1607 12464 12811 51155 51155 SSGLTAVWVAR 11 0 1 Unmodified _SSGLTAVWVAR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.8223 2 573.81693 1145.61931 81779.82 0.62916 0.00036102 0.33341 0.00019132 0.96257 0.00055234 573.817081512947 578.821354300792 83.258 0.59344 83.258 82.869 83.463 0 107 44 4 0 0 0 0.00011853 2 50862 96.331 85.167 1 1.2301 1.2073 0 13780000 5747100 8032900 32852 1607 12464 12811 51156;51157 51157 SSGPTSLFAVTVAPPGAR 18 0 1 Unmodified _SSGPTSLFAVTVAPPGAR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 858.4634 2 857.959768 1713.90498 64859.86 0.64576 0.00055404 0.057146 4.9029E-05 0.70291 0.00060307 857.959926291865 862.964010164021 109.6 0.93164 109.6 109.08 110.01 -7.6294E-06 439 67 12 0 0 0 1.3664E-05 2 68548 102.87 102.87 1 1.5095 1.7858 0 313200000 113400000 199790000 32853 999 12465 12812 51158;51159 51159 SSGPTSLFAVTVAPPGAR 18 0 1 Unmodified _SSGPTSLFAVTVAPPGAR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.9595 2 857.959768 1713.90498 64599.56 0.87292 0.00074893 -0.046213 -3.9649E-05 0.82671 0.00070928 857.959714228825 862.963936094679 109.04 1.2817 109.04 108.23 109.51 0 465 58 14 0 0 0 1.0194E-05 2 69804 107.09 98.134 1 1.5156 1.7574 0 309720000 120940000 188790000 32854 999 12465 12812 51160;51161 51161 SSGPTSLFAVTVAPPGAR 18 0 1 Unmodified _SSGPTSLFAVTVAPPGAR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 862.9642 2 857.959768 1713.90498 65012.35 0.70683 0.00060643 0.22106 0.00018966 0.92789 0.00079609 858.461073398456 862.964435186213 120.86 0.89981 120.86 120.48 121.38 0 243 41 8 0 0 0 2.7425E-05 2 71687 67.997 67.997 1 0.98172 0.84566 0 61809000 32956000 28853000 32855 999 12465 12812 51162;51163 51162 SSGPTSLFAVTVAPPGAR 18 0 1 Unmodified _SSGPTSLFAVTVAPPGAR_ 0 0 0 B4DLR3;Q00839;Q96BA7;B3KX72 B4DLR3 B4DLR3 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 863.4669 2 857.959768 1713.90498 64918.96 0.739 0.00063403 0.39192 0.00033625 1.1309 0.00097028 857.959862648503 862.964509562466 120.65 0.88835 120.65 120.26 121.15 0 290 45 8 0 0 0 2.0125E-05 3 70611 72.705 72.705 1 0.99391 0.86745 0 79255000 40350000 38905000 32856 999 12465 12812 51164;51165;51166 51164 SSGPYGGGGQYFAK 14 1 0 Unmodified _SSGPYGGGGQYFAK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;A0A024QZ98;Q32P51;B4DP35;H0YH80;B4E0B5;Q3MI39 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.3182 2 688.317491 1374.62043 73156.8 0.74264 0.00051117 -0.28308 -0.00019485 0.45956 0.00031632 688.317391059072 692.324315936002 46.616 0.78633 46.616 46.313 47.099 0 360 69 9 0 0 0 0.00021134 2 25119 67.726 67.726 1 2.4734 2.8344 0 191980000 56939000 135040000 32857 317 12466 12813 51167;51168 51167 SSGPYGGGGQYFAK 14 1 0 Unmodified _SSGPYGGGGQYFAK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;A0A024QZ98;Q32P51;B4DP35;H0YH80;B4E0B5;Q3MI39 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.3592 2 688.317491 1374.62043 72700.24 0.71843 0.00049451 -0.19274 -0.00013267 0.52569 0.00036184 688.317502976415 692.324410264225 45.6 0.7457 45.6 45.233 45.979 0 370 65 9 0 0 0 0.0020735 1 25174 60.434 60.434 1 2.4085 2.7894 0 210120000 61770000 148350000 32858 317 12466 12813 51169 51169 SSGPYGGGGQYFAK 14 1 0 Unmodified _SSGPYGGGGQYFAK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;A0A024QZ98;Q32P51;B4DP35;H0YH80;B4E0B5;Q3MI39 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.8255 2 688.317491 1374.62043 72310.68 0.58458 0.00040238 0.18339 0.00012623 0.76797 0.00052861 688.317510776131 692.324581290898 54.173 0.90993 54.173 53.723 54.633 0 415 69 10 0 0 0 0.0023518 2 26853 48.981 48.981 1 1.4004 1.1096 0 18637000 7634800 11003000 32859 317 12466 12813 51170;51171 51170 SSGPYGGGGQYFAK 14 1 0 Unmodified _SSGPYGGGGQYFAK_ 0 0 0 F8W6I7;A0A024RB53;A0A024RAZ7;P09651;Q9BSM5;Q0VAC0;Q6IPF2;A0A024QZ98;Q32P51;B4DP35;H0YH80;B4E0B5;Q3MI39 F8W6I7 F8W6I7 HNRNPA1;HNRPA1;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.3243 2 688.317491 1374.62043 72971.57 0.40902 0.00028154 0.22013 0.00015152 0.62915 0.00043306 688.317632613067 692.32460972392 54.69 0.80603 54.69 54.342 55.148 0 401 60 10 0 0 0 0.00092574 1 26596 57.348 57.348 1 1.3452 1.0803 0 15071000 6401300 8669500 32860 317 12466 12813 51172 51172 SSGSPYGGGYGSGGGSGGYGSR 22 0 1 Unmodified _SSGSPYGGGYGSGGGSGGYGSR_ 0 0 0 P51991;B4E3E6;B4DDB6;B4E036;Q8NFG3;H7C1J8;Q66K53 P51991 P51991 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.4013 2 955.898625 1909.7827 62747.64 0.55085 0.00052655 -0.25633 -0.00024503 0.29452 0.00028153 955.898396169554 960.902615028285 31.841 0.52709 31.841 31.629 32.156 -1.9073E-06 264 50 7 0 0 0 6.2885E-08 3 15687 66.436 65.446 1 1.5793 1.6066 0 27441000 9804500 17637000 32861 1598 12467 12814 51173;51174;51175 51175 SSGSPYGGGYGSGGGSGGYGSR 22 0 1 Unmodified _SSGSPYGGGYGSGGGSGGYGSR_ 0 0 0 P51991;B4E3E6;B4DDB6;B4E036;Q8NFG3;H7C1J8;Q66K53 P51991 P51991 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 961.4045 2 955.898625 1909.7827 NaN NaN NaN 0.30334 0.00028996 NaN NaN NaN NaN 32.133 0.071129 32.133 32.112 32.183 0 0 0 0 0.00029317 1 15903 46.319 40.595 1 NaN NaN 0 2325800 0 2325800 32862 1598 12467 12814 51176 51176 SSGSPYGGGYGSGGGSGGYGSR 22 0 1 Unmodified _SSGSPYGGGYGSGGGSGGYGSR_ 0 0 0 P51991;B4E3E6;B4DDB6;B4E036;Q8NFG3;H7C1J8;Q66K53 P51991 P51991 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.4035 2 955.898625 1909.7827 62470.98 0.40336 0.00038558 -0.55872 -0.00053408 -0.15535 -0.0001485 955.898260263182 960.90229820288 31.23 0.48969 31.23 31.016 31.506 0 227 42 8 0 0 0 1.4333E-08 2 15352 76.341 76.341 1 1.5328 1.6763 0 34932000 14159000 20772000 32863 1598 12467 12814 51177;51178 51178 SSGSPYGGGYGSGGGSGGYGSR 22 0 1 Unmodified _SSGSPYGGGYGSGGGSGGYGSR_ 0 0 0 P51991;B4E3E6;B4DDB6;B4E036;Q8NFG3;H7C1J8;Q66K53 P51991 P51991 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 956.3998 2 955.898625 1909.7827 62791.64 0.19724 0.00018854 0.10808 0.00010331 0.30532 0.00029185 955.898621162131 960.902966884764 37.382 0.57839 37.382 37.154 37.733 0 256 42 8 0 0 0 0.031242 1 16764 21.841 21.841 1 0.97406 0.8265 0 9248000 4632500 4615500 32864 1598 12467 12814 51179 51179 SSGVPVDGFYTEEVR 15 0 1 Unmodified _SSGVPVDGFYTEEVR_ 0 0 0 Q5TDE9;Q5TDF0;Q9BSD7 Q5TDE9 Q5TDE9 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.8975 2 821.391384 1640.76822 NaN NaN NaN -0.015218 -1.25E-05 NaN NaN NaN NaN 85.335 0.53297 85.335 85.135 85.668 0 0 0 0 0.042454 1 51176 38.238 32.204 1 NaN NaN 0 7201900 0 7201900 32865 1826 12468 12815 51180 51180 SSHYDELLAAEAR 13 0 1 Unmodified _SSHYDELLAAEAR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2394 3 487.9038 1460.68957 88245.52 0.25401 0.00012393 0.33529 0.00016359 0.58931 0.00028753 487.90384948739 491.239983640836 57.601 0.79071 57.601 57.222 58.013 0 230 60 6 0 0 0 0.0042927 1 32509 25.978 25.978 1 1.302 1.3084 0 15959000 7097100 8861600 32866 618 12469 12816 51181 51181 SSHYDELLAAEAR 13 0 1 Unmodified _SSHYDELLAAEAR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.3566 2 731.352062 1460.68957 71565.68 0.71472 0.00052271 0.9108 0.00066612 1.6255 0.0011888 731.352139749761 736.357340592458 57.587 0.4863 57.587 57.323 57.81 -3.8147E-06 69 38 4 0 0 0 0.0010604 1 32576 59.367 54.754 1 0.93315 0.93716 0 9203300 4457600 4745700 32867 618 12469 12816 51182 51182 SSHYDELLAAEAR 13 0 1 Unmodified _SSHYDELLAAEAR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.3568 2 731.352062 1460.68957 70938.36 0.48289 0.00035316 0.18744 0.00013708 0.67033 0.00049025 731.351805266936 736.356522734051 55.905 0.45068 55.905 55.653 56.104 0 142 36 7 0 0 0 4.2587E-09 2 32057 120.96 113.9 1 1.5916 1.6115 0 20056000 7069400 12987000 32868 618 12469 12816 51183;51184 51184 SSHYDELLAAEAR 13 0 1 Unmodified _SSHYDELLAAEAR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8;H7C597 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.2403 3 487.9038 1460.68957 86856.64 0.15968 7.7909E-05 0.040512 1.9766E-05 0.20019 9.7675E-05 487.903758294278 491.239881493878 55.909 0.56454 55.909 55.641 56.206 0 238 45 7 0 0 0 4.2559E-05 1 32021 58.32 58.32 1 1.418 1.5505 0 30517000 11449000 19069000 32869 618 12469 12816 51185 51185 SSIAGLLLK 9 1 0 Unmodified _SSIAGLLLK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.296 2 451.289485 900.564418 91528.99 0.42269 0.00019076 0.1925 8.6874E-05 0.61519 0.00027763 451.289480869464 455.296552260189 94.3 0.96928 94.3 93.973 94.942 0 332 81 6 0 0 0 0.0028653 1 58443 73.248 53.612 1 1.8199 2.0441 0 55710000 18829000 36881000 32870 1754 12470 12817 51186 51186 SSIAGSEDAEPLAPPIK 17 1 0 Unmodified _SSIAGSEDAEPLAPPIK_ 0 0 0 Q03164;E9PR05;Q9HB80;H7C5W4 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.9433 2 841.435792 1680.85703 68600.2 0.53801 0.0004527 0.047992 4.0382E-05 0.58601 0.00049309 841.435690768644 845.442289558838 83.855 0.54081 83.855 83.593 84.134 0 202 45 6 0 0 0 4.4304E-09 2 50117 104.87 104.87 1 0.83799 0.82474 0 23977000 12818000 11159000 32871 1680 12471 12818 51187;51188 51188 SSIAGSEDAEPLAPPIK 17 1 0 Unmodified _SSIAGSEDAEPLAPPIK_ 0 0 0 Q03164;E9PR05;Q9HB80;H7C5W4 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 841.4396 2 841.435792 1680.85703 69544.81 0.63824 0.00053704 -0.13754 -0.00011573 0.50071 0.00042131 841.435378144674 845.442359784703 82.893 0.47938 82.893 82.646 83.126 0 196 37 7 0 0 0 3.9871E-09 2 50669 105.65 105.65 1 0.82455 0.86568 0 24010000 12581000 11429000 32872 1680 12471 12818 51189;51190 51190 SSIAGSEDAEPLAPPIK 17 1 0 Unmodified _SSIAGSEDAEPLAPPIK_ 0 0 0 Q03164;E9PR05;Q9HB80;H7C5W4 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 845.9442 2 841.435792 1680.85703 66582.14 0.81711 0.00068755 -0.37483 -0.0003154 0.44228 0.00037215 841.43515788119 845.442556350425 96.064 0.60825 96.064 95.716 96.324 0 201 38 8 0 0 0 0.021276 1 53720 24.514 24.514 1 2.0307 1.6219 0 9162400 3347600 5814800 32873 1680 12471 12818 51191 51191 SSIAGSEDAEPLAPPIK 17 1 0 Unmodified _SSIAGSEDAEPLAPPIK_ 0 0 0 Q03164;E9PR05;Q9HB80;H7C5W4 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.4427 2 841.435792 1680.85703 65983.47 0.43957 0.00036987 -0.007271 -6.1181E-06 0.4323 0.00036375 841.435794679892 845.443027148883 95.912 0.54687 95.912 95.612 96.159 0 193 35 8 0 0 0 0.00092457 2 52839 44.457 44.457 1 2.0013 1.6377 0 8441900 2496200 5945600 32874 1680 12471 12818 51192;51193 51192 SSIINEHMGSSSR 13 0 1 Oxidation (M) _SSIINEHM(ox)GSSSR_ SSIINEHM(1)GSSSR SSIINEHM(53.57)GSSSR 0 1 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.8279 2 710.827897 1419.64124 NaN NaN NaN -0.25001 -0.00017771 NaN NaN NaN NaN 19.814 0.18806 19.814 19.706 19.894 0 0 0 0 0.0028626 1 6329 53.567 7.5657 1 NaN NaN 0 7130700 7130700 0 32875 1680 12472 12819 51194 51194 1494 SSIINEHMGSSSR 13 0 1 Oxidation (M) _SSIINEHM(ox)GSSSR_ SSIINEHM(1)GSSSR SSIINEHM(54.47)GSSSR 0 1 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.3293 2 710.827897 1419.64124 73108.73 0.51846 0.00036853 -1.6363 -0.0011631 -1.1178 -0.00079456 710.827176818569 715.831930565351 19.44 0.26749 19.44 19.282 19.549 0 38 10 6 0 0 0 0.0010962 2 5848 54.471 54.471 1 0.88746 0.8827 0 7711500 3904100 3807400 32876 1680 12472 12819 51195;51196 51195 1494 SSISETLSGTDTFSSSNNHEK 21 1 0 Unmodified _SSISETLSGTDTFSSSNNHEK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.6709 3 743.336498 2226.98766 71405.01 0.33909 0.00025206 0.15138 0.00011252 0.49047 0.00036459 743.670862532381 746.342292032257 58.449 0.53138 58.449 58.13 58.661 0 152 42 6 0 0 0 3.2001E-07 1 33174 53.454 51.883 1 0.82265 0.84883 0 14625000 7715900 6908700 32877 1233 12473 12820 51197 51197 SSISETLSGTDTFSSSNNHEK 21 1 0 Unmodified _SSISETLSGTDTFSSSNNHEK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.3362 3 743.336498 2226.98766 71892.31 0.51822 0.00038521 0.077215 5.7397E-05 0.59543 0.00044261 743.336936037774 746.341097844911 57.219 0.6468 57.219 56.828 57.475 0 243 49 7 0 0 0 3.2352E-07 1 33175 53.342 52.554 1 0.64806 0.65682 0 16572000 10125000 6447700 32878 1233 12473 12820 51198 51198 SSISETLSGTDTFSSSNNHEK 21 1 0 Unmodified _SSISETLSGTDTFSSSNNHEK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 743.3369 3 743.336498 2226.98766 69996.79 0.69408 0.00051594 -0.31643 -0.00023522 0.37765 0.00028072 743.67070446804 746.007733095948 68.13 0.67305 68.13 67.942 68.615 0 316 48 10 0 0 0 3.1471E-07 2 35524 53.625 53.625 1 1.5698 1.2166 0 13556000 5625800 7930300 32879 1233 12473 12820 51199;51200 51200 SSLEDGCLSCGR 12 0 1 Unmodified _SSLEDGCLSCGR_ 0 0 0 Q9UBC3;B3KM53;Q59H79 Q9UBC3 Q9UBC3 DNMT3B DNA (cytosine-5)-methyltransferase 3B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.787 2 670.782101 1339.54965 NaN NaN NaN -0.071985 -4.8286E-05 NaN NaN NaN NaN 36.89 0.21938 36.89 36.72 36.94 0 0 0 0 0.0039733 1 18742 64.82 60.803 1 NaN NaN 0 3966500 0 3966500 32880 2097 12474 12821 51201 51201 SSLGQSASETEEDTVSVSK 19 1 0 Unmodified _SSLGQSASETEEDTVSVSK_ 0 0 0 Q13435;Q7Z3K9;E9PPJ0;E9PJ04;H0YCG1 Q13435 Q13435 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 975.4588 2 970.950189 1939.88582 63404.83 -0.073869 -7.1724E-05 -0.2131 -0.00020691 -0.28697 -0.00027863 970.95068586668 974.956619422428 50.462 0.296 50.462 50.279 50.575 3.8147E-06 117 28 6 0 0 0 7.9621E-12 2 27777 101.2 95.719 1 1.4811 1.5391 0 29557000 12320000 17237000 32881 1713 12475 12822 51202;51203 51202 SSLGQSASETEEDTVSVSK 19 1 0 Unmodified _SSLGQSASETEEDTVSVSK_ 0 0 0 Q13435;Q7Z3K9;E9PPJ0;E9PJ04;H0YCG1 Q13435 Q13435 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 975.4573 2 970.950189 1939.88582 61992.86 0.090819 8.8181E-05 -0.4835 -0.00046945 -0.39268 -0.00038127 970.951031873686 975.457305273065 49.353 0.43016 49.353 49.125 49.555 -3.8147E-06 175 37 6 0 0 0 8.4204E-12 3 27722 100.54 100.54 1 1.4509 1.4513 0 15430000 5750700 9679500 32882 1713 12475 12822 51204;51205;51206 51205 SSLGQSASETEEDTVSVSK 19 1 0 Unmodified _SSLGQSASETEEDTVSVSK_ 0 0 0 Q13435;Q7Z3K9;E9PPJ0;E9PJ04;H0YCG1 Q13435 Q13435 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 975.4606 2 970.950189 1939.88582 62554.14 -0.20286 -0.00019697 0.4637 0.00045023 0.26085 0.00025327 971.452300652266 974.957632924188 59.493 0.48229 59.493 59.224 59.706 0 177 37 7 0 0 0 0.011127 1 30326 24.935 19.551 1 0.71396 0.55867 0 3222800 1854800 1368100 32883 1713 12475 12822 51207 51207 SSLGSHQLPR 10 0 1 Unmodified _SSLGSHQLPR_ 0 0 0 C9JFK9;Q53GY1;O95817 C9JFK9 C9JFK9 BAG3 BAG family molecular chaperone regulator 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.295 2 541.291079 1080.56761 80864.35 1.1525 0.00062385 0.22583 0.00012224 1.3783 0.00074609 541.291144260575 546.295289919502 24.359 0.27689 24.359 24.143 24.42 0 26 11 4 0 0 0 0.00069328 1 10108 82.749 82.749 1 3.1511 3.2011 0 7504700 1626700 5878000 32884 1133 12476 12823 51208 51208 SSLGSLQTPEAVTTR 15 0 1 Unmodified _SSLGSLQTPEAVTTR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4;Q05DV5 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.9116 2 773.907202 1545.79985 70042.18 0.68245 0.00052815 0.13037 0.00010089 0.81281 0.00062904 773.907598241032 778.911088084657 71.346 0.63548 71.346 71.016 71.651 0 272 53 7 0 0 0 1.6887E-15 2 41615 134.01 134.01 1 1.4237 1.4563 0 35515000 16609000 18906000 32885 1873 12477 12824 51209;51210 51209 SSLGSLQTPEAVTTR 15 0 1 Unmodified _SSLGSLQTPEAVTTR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4;Q05DV5 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.9079 2 773.907202 1545.79985 72723.59 0.50736 0.00039265 0.1688 0.00013063 0.67615 0.00052328 773.907265487262 778.911475691281 70.169 0.59866 70.169 69.819 70.418 0 235 49 7 0 0 0 1.3699E-15 2 41841 134.75 117.73 1 1.0422 1.1892 0 49985000 25861000 24125000 32886 1873 12477 12824 51211;51212 51212 SSLGSLQTPEAVTTR 15 0 1 Unmodified _SSLGSLQTPEAVTTR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4;Q05DV5 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 779.3931 2 773.907202 1545.79985 71691.74 0.7093 0.00054893 0.17324 0.00013407 0.88254 0.000683 773.907923317059 778.910892780973 81.68 0.64888 81.68 81.434 82.083 7.6294E-06 156 38 6 0 0 0 0.045925 1 44254 49.423 49.423 1 1.2177 1.0181 0 3598300 1555800 2042500 32887 1873 12477 12824 51213 51213 SSLINSLK 8 1 0 Unmodified _SSLINSLK_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 435.2626 2 431.255643 860.496732 91960.29 -0.25671 -0.00011071 0.33919 0.00014628 0.082483 3.5571E-05 431.255674300414 435.262740694415 61.87 0.61557 61.87 61.566 62.182 0 242 49 8 0 0 0 0.054005 1 31742 42.287 0 1 1.1659 0.94488 0 24780000 10827000 13954000 32888 291 12478 12825 51214 51214 SSLLIEQPVK 10 1 0 Unmodified _SSLLIEQPVK_ 0 0 0 A5YM43;Q8NDX5;E7EX82 A5YM43 A5YM43 PHC3 Polyhomeotic-like protein 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.3297 2 557.329339 1112.64412 NaN NaN NaN -0.049609 -2.7648E-05 NaN NaN NaN NaN 81.726 0.43457 81.726 81.54 81.975 0 0 0 0 0.01668 1 44360 56.434 50.692 1 NaN NaN 0 1175900 1175900 0 32889 677 12479 12826 51215 51215 SSLLIEQPVK 10 1 0 Unmodified _SSLLIEQPVK_ 0 0 0 A5YM43;Q8NDX5;E7EX82 A5YM43 A5YM43 PHC3 Polyhomeotic-like protein 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.831 2 557.329339 1112.64412 NaN NaN NaN -0.037904 -2.1125E-05 NaN NaN NaN NaN 81.874 0.3465 81.874 81.669 82.016 7.6294E-06 0 0 0 0.030216 1 43601 51.949 35.173 1 NaN NaN 0 1181200 1181200 0 32890 677 12479 12826 51216 51216 SSLLLGFR 8 0 1 Unmodified _SSLLLGFR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.7706 2 446.766178 891.517802 NaN NaN NaN 0.1528 6.8268E-05 NaN NaN NaN NaN 94.408 1.009 94.408 93.812 94.821 0 0 0 0 0.027494 2 57484 60.799 48.404 1 NaN NaN 0 21609000 0 21609000 32891 1207 12480 12827 51217;51218 51218 SSLLLGFR 8 0 1 Unmodified _SSLLLGFR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.7664 2 446.766178 891.517802 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.098 1 94.098 93.598 94.598 0 0 0 0 0.014267 1 57141 71.296 50.814 1 32892 1207 12480 12827 51219 51219 SSLLLGFR 8 0 1 Unmodified _SSLLLGFR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.7701 2 446.766178 891.517802 91267.08 0.23419 0.00010463 0.035527 1.5872E-05 0.26972 0.0001205 446.766027015525 451.770288925046 93.204 1.0479 93.204 92.69 93.738 0 244 91 4 0 0 0 0.0049823 2 57657 91.906 74.212 1 2.1508 2.242 0 22333000 7706700 14626000 32893 1207 12480 12827 51220;51221 51221 SSLLVGNLK 9 1 0 Unmodified _SSLLVGNLK_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0 B3KPJ4 B3KPJ4 PHC2 Polyhomeotic-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.7921 2 465.784567 929.554582 90748.71 0.32412 0.00015097 0.32338 0.00015062 0.6475 0.0003016 465.784464157983 469.791840829421 69.264 0.59669 69.264 68.987 69.584 0 120 50 4 0 0 0 0.0067182 1 40169 63.48 56.841 1 1.7163 1.7324 0 10072000 3417200 6654300 32894 479 12481 12828 51222 51222 SSLLVGNLK 9 1 0 Unmodified _SSLLVGNLK_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0 B3KPJ4 B3KPJ4 PHC2 Polyhomeotic-like protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.7923 2 465.784567 929.554582 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.805 1 67.805 67.305 68.305 0 0 0 0 0.013074 1 40213 60.682 6.4769 1 32895 479 12481 12828 51223 51223 SSLQSQCLNEVLK 13 1 0 Unmodified _SSLQSQCLNEVLK_ 0 0 0 Q14204;H0YJ21 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 753.3863 2 753.385048 1504.75554 71487.63 0.94426 0.00071139 -0.25072 -0.00018889 0.69354 0.0005225 753.384948145946 757.392027298459 88.857 0.45227 88.857 88.581 89.033 0 105 30 5 0 0 0 0.056167 1 49044 27.914 27.914 1 0.8622 0.72835 0 1966200 1109700 856510 32896 1729 12482 12829 51224 51224 SSLSSAQADFNQLAELDR 18 0 1 Unmodified _SSLSSAQADFNQLAELDR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;Q14917 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.4752 2 976.471426 1950.9283 NaN NaN NaN 0.22082 0.00021562 NaN NaN NaN NaN 106.76 0.45032 106.76 106.56 107.01 0 0 0 0 3.4956E-17 1 66304 112.42 102.1 1 NaN NaN 0 13105000 0 13105000 32897 523 12483 12830 51225 51225 SSLSSAQADFNQLAELDR 18 0 1 Unmodified _SSLSSAQADFNQLAELDR_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16;Q14917 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.9781 2 976.471426 1950.9283 61947.02 0.4095 0.00039987 0.064756 6.3232E-05 0.47426 0.0004631 976.972936668747 981.475605733967 106.17 0.49953 106.17 105.97 106.47 -7.6294E-06 164 37 6 0 0 0 5.7899E-17 1 67483 122.97 112.64 1 1.738 1.8738 0 26114000 8276100 17838000 32898 523 12483 12830 51226 51226 SSLYEQMGDHK 11 1 0 Oxidation (M) _SSLYEQM(ox)GDHK_ SSLYEQM(1)GDHK SSLYEQM(111.61)GDHK 0 1 0 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8682 2 655.787709 1309.56087 76706.38 0.44511 0.0002919 0.10568 6.9301E-05 0.55078 0.0003612 655.788074821998 659.794373684416 17.856 0.1557 17.856 17.78 17.936 0 14 5 4 0 0 0 1.3796E-06 1 4943 111.61 105 1 1.3147 1.2956 0 8555000 4197600 4357400 32899 2150 12484 12831 51227 51227 2002 SSLYSEVDVHFR 12 0 1 Unmodified _SSLYSEVDVHFR_ 0 0 0 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.8559 2 719.851698 1437.68884 NaN NaN NaN 0.24539 0.00017664 NaN NaN NaN NaN 77.349 0.21873 77.349 77.239 77.458 0 0 0 0 0.0032943 2 46771 66.056 43.414 1 NaN NaN 0 2349300 0 2349300 32900 1874 12485 12832 51228;51229 51228 SSMGMDISAIDLINIESFSSR 21 0 1 2 Oxidation (M) _SSM(ox)GM(ox)DISAIDLINIESFSSR_ SSM(1)GM(1)DISAIDLINIESFSSR SSM(136.81)GM(136.81)DISAIDLINIESFSSR 0 2 0 A8K9K6;O00567;A0PJ92;H0YDU4 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1158.042 2 1153.03796 2304.06136 55900.25 0.37071 0.00042744 -0.14131 -0.00016294 0.2294 0.0002645 1153.53914793384 1158.54359962632 124.65 0.74371 124.65 124.31 125.05 -7.6294E-06 285 51 9 0 0 0 1.6605E-29 2 80877 136.81 136.81 1 1.5064 1.6685 0 63288000 26012000 37276000 32901 785 12486 12833 51230;51231 51230 623;624 SSMGMDISAIDLINIESFSSR 21 0 1 2 Oxidation (M) _SSM(ox)GM(ox)DISAIDLINIESFSSR_ SSM(1)GM(1)DISAIDLINIESFSSR SSM(61.1)GM(61.1)DISAIDLINIESFSSR 0 2 0 A8K9K6;O00567;A0PJ92;H0YDU4 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1154.0414 2 1153.03796 2304.06136 NaN NaN NaN 0.32382 0.00037338 NaN NaN NaN NaN 124.29 0.49422 124.29 124.07 124.57 0 0 0 0 8.7792E-07 1 82577 61.097 56.467 1 NaN NaN 0 28686000 28686000 0 32902 785 12486 12833 51232 51232 623;624 SSMNVDEAFSSLAR 14 0 1 Oxidation (M) _SSM(ox)NVDEAFSSLAR_ SSM(1)NVDEAFSSLAR SSM(65.18)NVDEAFSSLAR 0 1 0 A0A024RB27;Q504R6;P51153;A0A087WWB9 A0A024RB27 A0A024RB27 hCG_24991;RAB13 Ras-related protein Rab-13 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.3516 2 765.348662 1528.68277 NaN NaN NaN 0.45518 0.00034837 NaN NaN NaN NaN 80.037 0.58849 80.037 79.644 80.233 0 0 0 0 0.000803 1 47424 65.179 59.573 1 NaN NaN 0 7283600 0 7283600 32903 322 12487 12834 51233 51233 247 SSMNVDEAFSSLAR 14 0 1 Oxidation (M) _SSM(ox)NVDEAFSSLAR_ SSM(1)NVDEAFSSLAR SSM(77.67)NVDEAFSSLAR 0 1 0 A0A024RB27;Q504R6;P51153;A0A087WWB9 A0A024RB27 A0A024RB27 hCG_24991;RAB13 Ras-related protein Rab-13 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.354 2 765.348662 1528.68277 NaN NaN NaN 0.15303 0.00011712 NaN NaN NaN NaN 78.851 0.59372 78.851 78.594 79.188 0 0 0 0 0.00020195 1 47782 77.674 63.517 1 NaN NaN 0 8895700 0 8895700 32904 322 12487 12834 51234 51234 247 SSNLSVTTDFSESLQSSNIESK 22 1 0 Unmodified _SSNLSVTTDFSESLQSSNIESK_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424;H0YDQ3;H0YE95;H0YDG6 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1185.069 2 1180.55862 2359.10269 NaN NaN NaN 0.59929 0.0007075 NaN NaN NaN NaN 97.108 0.27573 97.108 96.955 97.231 0 0 0 0 4.1131E-06 1 60718 57.288 50.56 1 NaN NaN 0 3221400 0 3221400 32905 640 12488 12835 51235 51235 SSNSLVFQTLPR 12 0 1 Unmodified _SSNSLVFQTLPR_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.8693 2 674.864608 1347.71466 71962.27 0.7361 0.00049677 -0.72772 -0.00049111 0.008383 5.6574E-06 674.864094847136 679.868484941727 87.947 0.59876 87.947 87.797 88.396 7.6294E-06 155 48 5 0 0 0 0.0034004 2 53109 69.672 57.436 1 0.55339 0.5845 0 40436000 21981000 18455000 32906 1965 12489 12836 51236;51237 51236 SSNSLVFQTLPR 12 0 1 Unmodified _SSNSLVFQTLPR_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.8646 2 674.864608 1347.71466 NaN NaN NaN -0.39212 -0.00026463 NaN NaN NaN NaN 86.94 0.66266 86.94 86.73 87.393 0 0 0 0 5.5297E-20 1 53550 136.49 119.39 1 NaN NaN 0 35730000 35730000 0 32907 1965 12489 12836 51238 51238 SSNSLVFQTLPR 12 0 1 Unmodified _SSNSLVFQTLPR_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.8642 2 674.864608 1347.71466 72254.88 0.41967 0.00028322 0.013161 8.8821E-06 0.43284 0.00029211 674.864300939291 679.868572710675 100.87 0.7545 100.87 100.64 101.39 0 234 51 6 0 0 0 0.00017643 1 57053 91.313 86.848 1 0.6218 0.53356 0 8329400 5177100 3152300 32908 1965 12489 12836 51239 51239 SSNSLVFQTLPR 12 0 1 Unmodified _SSNSLVFQTLPR_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.8684 2 674.864608 1347.71466 73187.16 0.49867 0.00033654 0.02946 1.9881E-05 0.52813 0.00035642 674.86417997649 679.868515776319 100.69 0.95416 100.69 100.46 101.41 0 257 65 6 0 0 0 0.010022 1 56073 59.84 48.126 1 0.64025 0.52863 0 8192900 4776500 3416400 32909 1965 12489 12836 51240 51240 SSPAAFINPPIGTVTPALK 19 1 0 Unmodified _SSPAAFINPPIGTVTPALK_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DSH9;Q6R954;F8WEE2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 941.028 2 941.027651 1880.04075 65967.28 0.53453 0.00050301 0.15895 0.00014958 0.69348 0.00065258 941.027704465887 945.034855169858 115.45 0.38219 115.45 115.26 115.64 0 107 24 6 0 0 0 4.9101E-06 2 73547 80.522 80.522 1 0.80787 0.83527 0 11083000 7103500 3979200 32910 1063 12490 12837 51241;51242 51242 SSPAAFINPPIGTVTPALK 19 1 0 Unmodified _SSPAAFINPPIGTVTPALK_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DSH9;Q6R954;F8WEE2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.0361 2 941.027651 1880.04075 65731.84 0.90561 0.0008522 -0.055617 -5.2337E-05 0.84999 0.00079986 941.027504177866 945.034579041942 114.92 0.38304 114.92 114.73 115.11 0 100 23 6 0 0 0 3.6653E-08 2 74840 92.856 92.856 1 0.85642 0.86914 0 12832000 6077000 6755100 32911 1063 12490 12837 51243;51244 51243 SSPAAFINPPIGTVTPALK 19 1 0 Unmodified _SSPAAFINPPIGTVTPALK_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DSH9;Q6R954;F8WEE2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 941.5314 2 941.027651 1880.04075 65556.07 0.61929 0.00058276 0.26551 0.00024985 0.8848 0.00083262 941.52977422147 945.035151528358 127.07 0.38173 127.07 126.86 127.24 -7.6294E-06 82 16 6 0 0 0 0.0070142 1 76562 29.638 29.638 1 0.82249 0.63961 0 3660500 2169600 1491000 32912 1063 12490 12837 51245 51245 SSPAAFINPPIGTVTPALK 19 1 0 Unmodified _SSPAAFINPPIGTVTPALK_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DSH9;Q6R954;F8WEE2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 945.5355 2 941.027651 1880.04075 64485.32 0.62401 0.00058721 0.27604 0.00025976 0.90005 0.00084697 941.027484444108 945.034640722716 126.89 0.4479 126.89 126.69 127.14 0 83 20 6 0 0 0 0.0052036 1 75464 31.708 31.708 1 0.84453 0.66734 0 3204100 1747200 1456900 32913 1063 12490 12837 51246 51246 SSPEGPDPPVLTEVSK 16 1 0 Unmodified _SSPEGPDPPVLTEVSK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 823.9208 2 819.914692 1637.81483 68558.81 0.43176 0.000354 0.035653 2.9232E-05 0.46741 0.00038324 819.915252166717 823.92126289725 77.338 0.39139 77.338 77.117 77.509 0 97 33 4 0 0 0 0.019615 3 45582 28.903 28.903 1 0.84698 0.85037 0 7477400 3709000 3768400 32914 1680 12491 12838 51247;51248;51249 51247 SSPELEDTATSSK 13 1 0 Unmodified _SSPELEDTATSSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.3164 2 676.314811 1350.61507 75144.23 0.77957 0.00052723 0.031792 2.1501E-05 0.81136 0.00054873 676.314574379678 680.321885144792 26.319 0.35641 26.319 26.096 26.452 -1.9073E-06 114 23 7 0 0 0 1.1427E-08 1 11705 113.63 106.5 1 2.0365 2.1915 0 38446000 14264000 24182000 32915 1569 12492 12839 51250 51250 SSPELEDTATSSK 13 1 0 Unmodified _SSPELEDTATSSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.3207 2 676.314811 1350.61507 73630.07 0.86948 0.00058804 -0.14656 -9.9122E-05 0.72292 0.00048892 676.314486317148 680.321825395054 25.958 0.3139 25.958 25.791 26.105 0 96 19 8 0 0 0 7.6128E-06 2 11400 103.08 94.502 1 1.9459 2.1946 0 66824000 20533000 46290000 32916 1569 12492 12839 51251;51252 51251 SSPELEDTATSSK 13 1 0 Unmodified _SSPELEDTATSSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.3226 2 676.314811 1350.61507 74198.68 0.4074 0.00027553 0.12812 8.6648E-05 0.53551 0.00036218 676.31461806753 680.321943619963 29.673 0.64717 29.673 29.316 29.964 0 212 46 7 0 0 0 0.031658 1 11976 33.229 33.229 1 3.1495 2.4806 0 5696900 1308600 4388300 32917 1569 12492 12839 51253 51253 SSPEPVALTESETEYVIR 18 0 1 Unmodified _SSPEPVALTESETEYVIR_ 0 0 0 Q9Y678;B3KW21;Q8WUI6 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1009.0043 2 1003.99948 2005.98442 NaN NaN NaN 0.40695 0.00040858 NaN NaN NaN NaN 102.09 0.51556 102.09 101.81 102.33 0 0 0 0 0.022076 2 62664 37.613 29.481 1 NaN NaN 0 8640500 0 8640500 32918 2151 12493 12840 51254;51255 51254 SSPEPVALTESETEYVIR 18 0 1 Unmodified _SSPEPVALTESETEYVIR_ 0 0 0 Q9Y678;B3KW21;Q8WUI6 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1003.9991 2 1003.99948 2005.98442 60873.82 0.55383 0.00055605 -0.47822 -0.00048013 0.075617 7.592E-05 1004.49947080782 1009.00375077253 101.38 0.58555 101.38 101.07 101.65 0 197 46 6 0 0 0 0.002412 2 63787 35.803 23.884 1 1.5359 1.5435 0 19210000 6961200 12249000 32919 2151 12493 12840 51256;51257 51257 SSPEPVALTESETEYVIR 18 0 1 Unmodified _SSPEPVALTESETEYVIR_ 0 0 0 Q9Y678;B3KW21;Q8WUI6 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1004.4997 2 1003.99948 2005.98442 61930.47 0.63397 0.0006365 0.66872 0.00067139 1.3027 0.0013079 1003.99987868067 1009.0042583582 114.39 0.36617 114.39 114.21 114.57 0 72 15 7 0 0 0 0.00043855 1 66794 45.115 35.328 1 1.0624 0.89726 0 4817200 2466100 2351100 32920 2151 12493 12840 51258 51258 SSPEPVALTESETEYVIR 18 0 1 Unmodified _SSPEPVALTESETEYVIR_ 0 0 0 Q9Y678;B3KW21;Q8WUI6 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1004.5019 2 1003.99948 2005.98442 61544.72 0.33548 0.00033683 0.66865 0.00067133 1.0041 0.0010082 1003.99933916621 1009.00473335558 114.27 0.37862 114.27 114.1 114.48 0 76 15 7 0 0 0 0.013768 1 65772 26.124 18.02 1 1.0958 0.91736 0 4902400 2315100 2587300 32921 2151 12493 12840 51259 51259 SSPEVSSINQEALVLTAK 18 1 0 Unmodified _SSPEVSSINQEALVLTAK_ 0 0 0 E5RGS9;Q9NRG0 E5RGS9 E5RGS9 CHRAC1 Chromatin accessibility complex protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 941.5074 2 936.999288 1871.98402 NaN NaN NaN -0.27364 -0.0002564 NaN NaN NaN NaN 110.76 0.41071 110.76 110.58 110.99 0 0 0 0 0.00064348 1 64094 56.599 47.411 1 NaN NaN 0 3590500 0 3590500 32922 1212 12494 12841 51260 51260 SSPGQTPEEGAQALAEFAALHGPALR 26 0 1 Unmodified _SSPGQTPEEGAQALAEFAALHGPALR_ 0 0 0 A0A024R4U3;Q14166;Q9BR23 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.44 3 869.105019 2604.29323 64351.19 0.93464 0.0008123 0.040633 3.5314E-05 0.97527 0.00084761 869.10427123187 872.775755402416 114.97 0.41019 114.97 114.77 115.18 0 98 26 8 0 0 0 0.0038199 2 73050 23.394 23.394 1 2.5177 2.5789 0 14465000 3633200 10832000 32923 161 12495 12842 51261;51262 51261 SSPSILAVQR 10 0 1 Unmodified _SSPSILAVQR_ 0 0 0 O14646;Q7Z4M7 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.308 2 529.303655 1056.59276 82692.23 0.3711 0.00019643 -0.013574 -7.1847E-06 0.35753 0.00018924 529.30370888939 534.307420924937 56.709 0.56242 56.709 56.448 57.011 0 194 51 5 0 0 0 0.0026779 1 31955 67.993 53.99 1 0.69935 0.70411 0 17456000 9747200 7708800 32924 1366 12496 12843 51263 51263 SSPSILAVQR 10 0 1 Unmodified _SSPSILAVQR_ 0 0 0 O14646;Q7Z4M7 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.308 2 529.303655 1056.59276 83712.78 0.26173 0.00013853 0.083857 4.4386E-05 0.34558 0.00018292 529.303703362094 534.307753877233 55.662 0.54548 55.662 55.388 55.934 -3.8147E-06 163 41 5 0 0 0 0.0011713 1 31963 75.043 59.402 1 0.74761 0.77428 0 21794000 12687000 9106500 32925 1366 12496 12843 51264 51264 SSPVEFECINEK 12 1 0 Unmodified _SSPVEFECINEK_ 0 0 0 A0A024R994;O75131;Q05DL8;H0YB26 A0A024R994 A0A024R994 CPNE3 Copine-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 719.8307 2 719.829574 1437.6446 74652.34 0.57671 0.00041513 0.40768 0.00029346 0.98439 0.0007086 719.830417100229 723.836241836801 76.706 0.28821 76.706 76.59 76.878 0 53 20 4 0 0 0 0.06067 1 40185 30.889 14.512 1 0.87383 0.72462 0 1578600 723670 854920 32926 271 12497 12844 51265 51265 SSQAFFSK 8 1 0 Unmodified _SSQAFFSK_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2313 2 451.224342 900.434132 90281.82 0.29187 0.0001317 0.055902 2.5224E-05 0.34777 0.00015692 451.224226171122 455.231341220919 36.219 0.87162 36.219 35.849 36.72 0 298 82 5 0 0 0 0.0087497 2 18223 77.282 47.097 1 1.0256 1.159 0 83167000 42184000 40984000 32927 924 12498 12845 51266;51267 51266 SSQAFFSK 8 1 0 Unmodified _SSQAFFSK_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.2313 2 451.224342 900.434132 89939.8 0.96303 0.00043454 0.091131 4.112E-05 1.0542 0.00047566 451.224214539049 455.231336822546 35.361 0.91523 35.361 34.952 35.867 0 320 81 6 0 0 0 0.0065363 1 17965 86.833 67.129 1 0.97918 1.0994 0 75576000 37658000 37918000 32928 924 12498 12845 51268 51268 SSQAFFSK 8 1 0 Unmodified _SSQAFFSK_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 455.2319 2 451.224342 900.434132 88819.28 0.014903 6.7244E-06 0.34759 0.00015684 0.36249 0.00016357 451.22439034067 455.231417027401 40.887 1.0953 40.887 40.406 41.502 0 345 87 6 0 0 0 0.0075918 2 18881 82.279 59.787 1 1.2541 1.003 0 8827700 3780000 5047700 32929 924 12498 12845 51269;51270 51270 SSQAFFSK 8 1 0 Unmodified _SSQAFFSK_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 451.2241 2 451.224342 900.434132 90191.39 -0.1887 -8.5145E-05 0.35173 0.00015871 0.16303 7.3565E-05 451.224407911949 455.231424053742 40.636 0.59198 40.636 40.358 40.95 0 211 46 6 0 0 0 0.060096 1 18141 40.067 38.201 1 1.2458 1.0171 0 5663600 2499800 3163800 32930 924 12498 12845 51271 51271 SSQAFFSK 8 1 0 Unmodified _SSQAFFSK_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 455.231 2 451.224342 900.434132 90410.66 -0.2102 -9.4849E-05 0.64066 0.00028908 0.43045 0.00019423 451.224423783264 455.231627638024 41.067 0.58432 41.067 40.876 41.461 -3.8147E-06 184 46 6 0 0 0 0.029249 1 18366 52.716 41.205 1 1.2341 0.99666 0 4322700 1740700 2582000 32931 924 12498 12845 51272 51272 SSQGTSYDSYR 11 0 1 Unmodified _SSQGTSYDSYR_ 0 0 0 Q9HBB9;Q8WUM5;Q9HC39;I3L2C7;P57678 Q9HBB9 Q9HBB9 GEMIN4 Gem-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.7726 2 625.767831 1249.52111 79030.7 0.84158 0.00052663 0.515 0.00032227 1.3566 0.0008489 625.768447843798 630.772071356772 22.325 0.29888 22.325 22.179 22.478 -1.9073E-06 60 18 4 0 0 0 0.00034828 1 8427 85.533 82.831 1 1.2836 1.2739 0 8346500 3496400 4850100 32932 1940 12499 12846 51273 51273 SSQLLEPAVEETTK 14 1 0 Unmodified _SSQLLEPAVEETTK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.3961 2 766.396135 1530.77772 69651.3 0.49696 0.00038087 -0.07354 -5.6361E-05 0.42342 0.00032451 766.396564053614 770.402849313938 68.707 0.7789 68.707 68.219 68.998 7.6294E-06 252 68 6 0 0 0 0.0017744 1 39788 51.286 51.286 1 1.0627 1.1415 0 39233000 19248000 19986000 32933 1945 12500 12847 51274 51274 SSQLLEPAVEETTK 14 1 0 Unmodified _SSQLLEPAVEETTK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.4041 2 766.396135 1530.77772 69207.89 0.55196 0.00042302 -0.20481 -0.00015697 0.34715 0.00026605 766.396368552182 770.402655325059 67.5 0.35275 67.5 67.171 67.523 0 58 26 3 0 0 0 0.00011412 2 39923 82.85 82.85 1 1.5635 1.7341 0 47992000 23604000 24388000 32934 1945 12500 12847 51275;51276 51276 SSQLLEPAVEETTK 14 1 0 Unmodified _SSQLLEPAVEETTK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.4036 2 766.396135 1530.77772 70186.9 0.59847 0.00045866 0.049272 3.7762E-05 0.64774 0.00049642 766.396296491254 770.402919914867 78.729 0.85376 78.729 78.409 79.263 0 215 52 7 0 0 0 0.00048597 1 42176 60.49 60.49 1 1.5071 1.2071 0 7309500 2913500 4396000 32935 1945 12500 12847 51277 51277 SSQLLEPAVEETTK 14 1 0 Unmodified _SSQLLEPAVEETTK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 770.4033 2 766.396135 1530.77772 71205.88 0.68754 0.00052693 -0.06034 -4.6244E-05 0.6272 0.00048068 766.396169773194 770.402851906382 79.033 0.87389 79.033 78.639 79.513 0 248 54 7 0 0 0 0.039728 1 41491 28.379 25.057 1 1.4604 1.1915 0 6091700 2349600 3742000 32936 1945 12500 12847 51278 51278 SSQQPSTPQQAPPGQPQQGTFVAHK 25 1 0 Unmodified _SSQQPSTPQQAPPGQPQQGTFVAHK_ 0 0 0 E7ERS3;B4DTK7;Q86VM9;H3BRH3;B3KRL4 E7ERS3 E7ERS3 ZC3H18;NHN1 Zinc finger CCCH domain-containing protein 18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 880.7756 3 877.768519 2630.28373 NaN NaN NaN -0.3139 -0.00027553 NaN NaN NaN NaN 40.594 0.36561 40.594 40.46 40.826 0 0 0 0 0.032675 1 21214 24.831 21.237 1 NaN NaN 0 5163900 0 5163900 32937 1033 12501 12848 51279 51279 SSQQPSTPQQAPPGQPQQGTFVAHK 25 1 0 Unmodified _SSQQPSTPQQAPPGQPQQGTFVAHK_ 0 0 0 E7ERS3;B4DTK7;Q86VM9;H3BRH3;B3KRL4 E7ERS3 E7ERS3 ZC3H18;NHN1 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.7742 3 877.768519 2630.28373 65966.98 0.84464 0.00074139 -0.14368 -0.00012612 0.70095 0.00061527 878.102827898448 880.774102978681 39.672 0.44173 39.672 39.438 39.88 0 136 36 7 0 0 0 6.1961E-06 3 21000 38.122 38.122 1 1.0102 1.0724 0 20492000 5554300 14938000 32938 1033 12501 12848 51280;51281;51282 51282 SSQQPSTPQQAPPGQPQQGTFVAHK 25 1 0 Unmodified _SSQQPSTPQQAPPGQPQQGTFVAHK_ 0 0 0 E7ERS3;B4DTK7;Q86VM9;H3BRH3;B3KRL4 E7ERS3 E7ERS3 ZC3H18;NHN1 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 878.1022 3 877.768519 2630.28373 65857.76 -0.054506 -4.7844E-05 0.27763 0.00024369 0.22312 0.00019585 878.103099539667 880.440568240104 47.884 0.5562 47.884 47.576 48.132 0 200 44 6 0 0 0 0.040597 1 22615 11.853 11.853 1 0.63457 0.51813 0 4706700 3054800 1651900 32939 1033 12501 12848 51283 51283 SSQSSSQQFSGIGR 14 0 1 Unmodified _SSQSSSQQFSGIGR_ 0 0 0 Q59F66;Q92841;Q9UQL5 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.3452 2 728.344768 1454.67498 70525.59 0.43706 0.00031833 0.22566 0.00016436 0.66272 0.00048269 728.345034948438 733.849768763763 33.499 0.57858 33.499 33.197 33.775 0 132 47 5 0 0 0 8.2133E-05 1 16667 88.187 81.298 1 1.4914 1.4661 0 14292000 8039800 6252500 32940 1801 12502 12849 51284 51284 SSQSSVTVENASKPDFTK 18 2 0 Unmodified _SSQSSVTVENASKPDFTK_ 0 0 1 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.4683 2 956.468352 1910.92215 62939.13 0.50478 0.0004828 0.071815 6.8689E-05 0.57659 0.00055149 956.969819493717 964.482522655613 40.385 0.33257 40.385 40.212 40.545 0 84 28 4 0 0 0 0.00038829 2 21068 65.092 59.708 1 0.97775 1.1601 0 26612000 13025000 13587000 32941 1924 12503 12850 51285;51286 51285 SSQSSVTVENASKPDFTK 18 2 0 Unmodified _SSQSSVTVENASKPDFTK_ 0 0 1 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.97 2 956.468352 1910.92215 62802.45 0.51968 0.00049706 0.016923 1.6186E-05 0.5366 0.00051324 956.969879438331 964.984207073235 39.364 0.31653 39.364 39.202 39.519 0 119 28 6 0 0 0 2.5476E-22 1 20816 177.38 177.38 1 0.72365 0.83463 0 29026000 14652000 14374000 32942 1924 12503 12850 51287 51287 SSQSSVTVENASKPDFTK 18 2 0 Unmodified _SSQSSVTVENASKPDFTK_ 0 0 1 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3156 3 637.981327 1910.92215 75155 0.63751 0.00040672 -0.074504 -4.7532E-05 0.563 0.00035919 638.315557872434 643.323771553425 39.353 0.4021 39.353 39.173 39.576 0 165 34 6 0 0 0 0.0049003 1 20828 28.813 23.518 1 0.96738 1.1192 0 41072000 23326000 17746000 32943 1924 12503 12850 51288 51288 SSSAEGHTDAVLDLSWNK 18 1 0 Unmodified _SSSAEGHTDAVLDLSWNK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3087 3 639.637671 1915.89118 77185.95 0.80606 0.00051559 -0.48244 -0.00030859 0.32362 0.000207 639.638120300351 642.308625980323 79.652 0.54357 79.652 79.362 79.906 0 210 42 7 0 0 0 2.0683E-05 2 48331 52.814 52.814 1 0.58992 0.61041 0 33095000 19727000 13367000 32944 339 12504 12851 51289;51290 51290 SSSAEGHTDAVLDLSWNK 18 1 0 Unmodified _SSSAEGHTDAVLDLSWNK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.6435 3 639.637671 1915.89118 76052.98 0.58573 0.00037465 0.39844 0.00025486 0.98417 0.00062951 639.638621294561 642.309138482495 92.561 0.49696 92.561 92.266 92.763 0 143 23 8 0 0 0 0.0033895 1 51599 28.472 24.811 1 1.309 1.0222 0 16077000 6955500 9121300 32945 339 12504 12851 51291 51291 SSSGLLEWESK 11 1 0 Unmodified _SSSGLLEWESK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0;M0R076 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.8082 2 611.801143 1221.58773 78475.88 0.57436 0.0003514 -0.15359 -9.3965E-05 0.42078 0.00025743 611.80106035716 615.807922284323 75.938 0.76232 75.938 75.358 76.12 0 246 64 5 0 0 0 0.00046797 2 44429 76.143 67.922 1 1.4858 1.6037 0 41957000 13789000 28168000 32946 865 12505 12852 51292;51293 51293 SSSGLLEWESK 11 1 0 Unmodified _SSSGLLEWESK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0;M0R076 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.8022 2 611.801143 1221.58773 78708.91 0.43029 0.00026325 0.33185 0.00020302 0.76213 0.00046627 611.801469017494 615.808274561499 74.621 1.0935 74.621 73.828 74.922 0 300 94 6 0 0 0 0.0045664 3 44889 57.785 45.738 1 1.5324 1.7028 0 50235000 17342000 32894000 32947 865 12505 12852 51294;51295;51296 51296 SSSHDSGTDITSVTLGDTTAVK 22 1 0 Unmodified _SSSHDSGTDITSVTLGDTTAVK_ 0 0 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.3524 3 727.016877 2178.0288 72223.4 0.74702 0.0005431 -0.072217 -5.2503E-05 0.67481 0.0004906 727.016810743436 730.356550264018 71.657 0.55122 71.657 71.378 71.929 0 247 47 7 0 0 0 1.7922E-07 1 41826 53.359 53.359 1 0.93281 0.91837 0 24114000 11151000 12963000 32948 1680 12506 12853 51297 51297 SSSHDSGTDITSVTLGDTTAVK 22 1 0 Unmodified _SSSHDSGTDITSVTLGDTTAVK_ 0 0 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.0169 3 727.016877 2178.0288 71809.27 0.61173 0.00044474 0.13999 0.00010177 0.75172 0.00054651 727.350910240356 729.688103670015 70.429 0.59742 70.429 70.087 70.685 0 245 48 7 0 0 0 0.00080671 1 41920 30.981 30.981 1 0.93321 0.93858 0 27496000 13423000 14073000 32949 1680 12506 12853 51298 51298 SSSHDSGTDITSVTLGDTTAVK 22 1 0 Unmodified _SSSHDSGTDITSVTLGDTTAVK_ 0 0 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.0231 3 727.016877 2178.0288 NaN NaN NaN 0.54369 0.00039527 NaN NaN NaN NaN 82.008 0.62801 82.008 81.706 82.334 0 0 0 0 0.037623 1 44482 24.207 20.969 1 NaN NaN 0 7436900 0 7436900 32950 1680 12506 12853 51299 51299 SSSHDSGTDITSVTLGDTTAVK 22 1 0 Unmodified _SSSHDSGTDITSVTLGDTTAVK_ 0 0 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.3506 3 727.016877 2178.0288 71390.95 0.5349 0.00038888 0.6539 0.0004754 1.1888 0.00086428 727.016926832576 729.688424545515 82.15 0.72997 82.15 81.793 82.523 0 278 43 10 0 0 0 1.5355E-05 2 43769 41.45 41.45 1 2.1039 1.7263 0 9012600 3265500 5747200 32951 1680 12506 12853 51300;51301 51301 SSSIIGSSSASHTSQATSGANSK 23 1 0 Unmodified _SSSIIGSSSASHTSQATSGANSK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.0089 3 718.008604 2151.00398 71795.5 0.42339 0.000304 0.0019092 1.3708E-06 0.4253 0.00030537 718.343067088853 720.680085141804 23.196 0.27094 23.196 23.045 23.316 0 58 12 6 0 0 0 5.0985E-30 1 9096 126.61 118.71 1 0.6425 0.64622 0 18551000 10130000 8420700 32952 873 12507 12854 51302 51302 SSSIIGSSSASHTSQATSGANSK 23 1 0 Unmodified _SSSIIGSSSASHTSQATSGANSK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.0092 3 718.008604 2151.00398 72210.95 0.25997 0.00018666 0.26122 0.00018756 0.5212 0.00037422 718.008581977994 720.679992828119 22.949 0.23806 22.949 22.823 23.061 0 47 9 6 0 0 0 7.0678E-60 1 8864 166.69 158.89 1 0.61073 0.65809 0 22693000 13371000 9322000 32953 873 12507 12854 51303 51303 SSSIIGSSSASHTSQATSGANSK 23 1 0 Unmodified _SSSIIGSSSASHTSQATSGANSK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1076.5085 2 1076.50927 2151.00398 NaN NaN NaN -0.095164 -0.00010245 NaN NaN NaN NaN 22.949 0.19558 22.949 22.843 23.039 0 0 0 0 3.424E-09 1 8897 71.344 58.961 1 NaN NaN 0 6795600 6795600 0 32954 873 12507 12854 51304 51304 SSSIIGSSSASHTSQATSGANSK 23 1 0 Unmodified _SSSIIGSSSASHTSQATSGANSK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.0153 3 718.008604 2151.00398 71431.45 0.47337 0.00033989 -0.29345 -0.0002107 0.17993 0.00012919 718.342718275185 720.679994279163 25.872 0.35305 25.872 25.692 26.045 0 78 14 8 0 0 0 8.388E-13 2 9597 96.54 88.643 1 1.5174 1.1913 0 3940400 1703900 2236600 32955 873 12507 12854 51305;51306 51306 SSSIIGSSSASHTSQATSGANSK 23 1 0 Unmodified _SSSIIGSSSASHTSQATSGANSK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.0148 3 718.008604 2151.00398 71718.56 0.60262 0.00043268 0.057085 4.0987E-05 0.6597 0.00047367 718.343194946002 720.680109932038 25.958 0.42542 25.958 25.744 26.17 0 75 17 8 0 0 0 1.1711E-05 2 9208 39.288 39.288 1 1.5046 1.177 0 3382300 1116600 2265700 32956 873 12507 12854 51307;51308 51308 SSSLNSGNYLNPACR 15 0 1 Unmodified _SSSLNSGNYLNPACR_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2;H0Y6S1 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.3777 2 820.378285 1638.74202 NaN NaN NaN -1.1733 -0.00096256 NaN NaN NaN NaN 57.112 0.45663 57.112 56.924 57.38 0 0 0 0 0.0040474 1 32126 58.676 42.045 1 NaN NaN 0 9705500 9705500 0 32957 2118 12508 12855 51309 51309 SSSLNSGNYLNPACR 15 0 1 Unmodified _SSSLNSGNYLNPACR_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2;H0Y6S1 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 825.8851 2 820.378285 1638.74202 68587.54 0.80099 0.00065711 -0.46946 -0.00038514 0.33152 0.00027198 820.378591575561 825.38257562468 66.735 0.42257 66.735 66.535 66.958 0 131 25 8 0 0 0 0.0010921 1 34673 48.741 48.741 1 0.9362 0.81113 0 2001100 1167900 833150 32958 2118 12508 12855 51310 51310 SSSLNSGNYLNPACR 15 0 1 Unmodified _SSSLNSGNYLNPACR_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2;H0Y6S1 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 825.3836 2 820.378285 1638.74202 73044.77 0.62309 0.00051117 0.20511 0.00016827 0.8282 0.00067944 820.379595093147 825.383474241401 67.304 0.45358 67.304 67.1 67.554 0 99 26 6 0 0 0 0.033565 1 34308 26.012 26.012 1 1.011 0.87183 0 1664000 862590 801370 32959 2118 12508 12855 51311 51311 SSSPAPADIAQTVQEDLR 18 0 1 Unmodified _SSSPAPADIAQTVQEDLR_ 0 0 0 Q6FI03;Q5U0Q1;Q13283;B7Z8K4;Q53HH4;Q32P45 Q6FI03 Q6FI03 G3BP;DKFZp686L1159;G3BP1 Ras GTPase-activating protein-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 947.9722 2 942.968519 1883.92248 63709.79 0.80773 0.00076166 -0.092316 -8.7051E-05 0.71541 0.00067461 943.970927765565 947.97253273193 104.72 1.1383 104.72 103.97 105.11 0 309 92 8 0 0 0 7.4521E-06 2 66291 81.904 73.174 1 0.64177 0.68972 0 25574000 16492000 9082100 32960 1710 12509 12856 51312;51313 51312 SSSQIPAQPSVAK 13 1 0 Unmodified _SSSQIPAQPSVAK_ 0 0 0 E7EPN9;Q9Y520;B4DQN8;A0A0A0MS30 E7EPN9 E7EPN9 PRRC2C Protein PRRC2C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.3568 2 650.348791 1298.68303 NaN NaN NaN -0.057335 -3.7287E-05 NaN NaN NaN NaN 35.971 0.28055 35.971 35.802 36.082 0 0 0 0 0.039559 1 18390 41.399 29.444 1 NaN NaN 0 4624600 0 4624600 32961 1219 12510 12857 51314 51314 SSSSQVVGPVQEEEYVAEK 19 1 0 Unmodified _SSSSQVVGPVQEEEYVAEK_ 0 0 0 I3L0W0;A0A140VK05;B4DN86;Q92667 I3L0W0 I3L0W0 AKAP1 A-kinase anchor protein 1, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1030.5005 2 1026.49202 2050.96949 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.366 1 70.366 69.866 70.866 0 0 0 0 0.0024818 1 42007 53.377 41.212 1 32962 614 12511 12858 51315 51315 SSSSSAASDTATSTQRPLR 19 0 2 Unmodified _SSSSSAASDTATSTQRPLR_ 0 0 1 A0A087WWP4;Q96T37;Q59EY1 A0A087WWP4 A0A087WWP4 RBM15 Putative RNA-binding protein 15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.9846 3 637.311847 1908.91371 75079.57 0.7262 0.00046281 -0.51414 -0.00032767 0.21206 0.00013515 637.645404890668 643.984593440869 20.607 0.27986 20.607 20.417 20.697 1.9073E-06 29 8 7 0 0 0 0.00022323 1 6904 40.349 29.305 1 0.95345 0.97201 0 11486000 6052700 5433400 32963 427 12512 12859 51316 51316 SSSSSAASDTATSTQRPLR 19 0 2 Unmodified _SSSSSAASDTATSTQRPLR_ 0 0 1 A0A087WWP4;Q96T37;Q59EY1 A0A087WWP4 A0A087WWP4 RBM15 Putative RNA-binding protein 15 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.984 3 637.311847 1908.91371 NaN NaN NaN 0.095589 6.092E-05 NaN NaN NaN NaN 22.825 0.23477 22.825 22.713 22.948 0 0 0 0 0.033711 1 7513 31.233 27.845 1 NaN NaN 0 700390 0 700390 32964 427 12512 12859 51317 51317 SSSSSQESLNRPLSAK 16 1 1 Unmodified _SSSSSQESLNRPLSAK_ 0 0 1 B7Z5R7;B7Z4E5;B7Z7Q8;H0Y5T1;F8WA11;Q7Z460 B7Z5R7 B7Z5R7 CLASP1 CLIP-associating protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.4236 2 839.423747 1676.83294 66233.33 1.0158 0.00085271 0.17819 0.00014957 1.194 0.0010023 839.925031904146 848.435086478833 24.771 0.18255 24.771 24.675 24.857 0 34 8 6 0 0 0 0.0021188 1 10462 50.897 35.032 1 1.1869 1.3139 0 7751300 3289700 4461700 32965 1090 12513 12860 51318 51318 SSSSTEQSLMMGLR 14 0 1 2 Oxidation (M) _SSSSTEQSLM(ox)M(ox)GLR_ SSSSTEQSLM(1)M(1)GLR SSSSTEQSLM(48.74)M(48.74)GLR 0 2 0 Q8N1G0 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.3503 2 773.347805 1544.68106 NaN NaN NaN 0.39588 0.00030615 NaN NaN NaN NaN 42.974 0.44061 42.974 42.651 43.092 0 0 0 0 0.0028278 1 23315 48.741 41.478 1 NaN NaN 0 5252300 0 5252300 32966 1905 12514 12861 51319 51319 1744;1745 SSSTALTTNVTEQTEK 16 1 0 Unmodified _SSSTALTTNVTEQTEK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.9156 2 848.915421 1695.81629 65478.73 0.87442 0.00074231 -0.30448 -0.00025848 0.56994 0.00048383 848.915335801962 852.921930443463 42.732 0.5773 42.732 42.49 43.067 0 257 47 7 0 0 0 0.00080206 3 22639 47.915 47.915 1 1.4803 1.5997 0 42559000 17112000 25447000 32967 1945 12515 12862 51320;51321;51322 51321 SSSTALTTNVTEQTEK 16 1 0 Unmodified _SSSTALTTNVTEQTEK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.9161 2 848.915421 1695.81629 65626.35 0.72546 0.00061585 -0.352 -0.00029882 0.37346 0.00031704 848.915408314799 852.921835220114 42.193 0.61701 42.193 41.855 42.472 3.8147E-06 305 55 9 0 0 0 8.6872E-34 3 22649 156.36 156.36 1 1.4518 1.6329 0 71972000 33690000 38281000 32968 1945 12515 12862 51323;51324;51325 51325 SSSTALTTNVTEQTEK 16 1 0 Unmodified _SSSTALTTNVTEQTEK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.4184 2 848.915421 1695.81629 65255.14 0.58271 0.00049467 0.14111 0.00011979 0.72382 0.00061446 848.915503495736 852.922584501969 50.086 0.81322 50.086 49.792 50.606 3.8147E-06 448 68 10 0 0 0 0.0001515 1 24458 63.662 63.662 1 2.6896 2.2126 0 39492000 9933800 29558000 32969 1945 12515 12862 51326 51326 SSSTALTTNVTEQTEK 16 1 0 Unmodified _SSSTALTTNVTEQTEK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.9147 2 848.915421 1695.81629 66065.98 0.34674 0.00029436 0.16187 0.00013742 0.50862 0.00043177 848.915581124547 852.92262533047 50.532 0.9149 50.532 50.211 51.126 0 465 67 10 0 0 0 0.020784 1 24106 28.327 28.327 1 2.8266 2.3309 0 30023000 8022800 22001000 32970 1945 12515 12862 51327 51327 SSSVGSSSSYPISPAVSR 18 0 1 Unmodified _SSSVGSSSSYPISPAVSR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 882.9355 2 877.931405 1753.84826 66740.25 0.53496 0.00046966 0.15873 0.00013935 0.69369 0.00060901 877.931366965619 882.935810789904 61.166 0.94464 61.166 60.752 61.697 0 292 69 7 0 0 0 4.5955E-05 4 34742 77.527 72.448 1 1.7649 1.8328 0 22408000 6542600 15865000 32971 1754 12516 12863 51328;51329;51330;51331 51328 SSSVGSSSSYPISPAVSR 18 0 1 Unmodified _SSSVGSSSSYPISPAVSR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.9375 2 877.931405 1753.84826 64987.59 0.49279 0.00043263 0.11475 0.00010074 0.60754 0.00053338 877.931387095372 882.935715958437 60.029 0.46716 60.029 59.828 60.295 0 187 31 8 0 0 0 1.7313E-05 2 34904 95.631 88.266 1 1.9001 2.1765 0 84353000 29717000 54636000 32972 1754 12516 12863 51332;51333 51332 SSSVGSSSSYPISPAVSR 18 0 1 Unmodified _SSSVGSSSSYPISPAVSR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 877.9324 2 877.931405 1753.84826 66096.57 0.20918 0.00018365 0.37318 0.00032763 0.58236 0.00051128 877.931833237763 882.936100133237 70.877 0.63967 70.877 70.569 71.209 0 196 41 7 0 0 0 0.0010025 2 37217 45.115 43.058 1 2.3192 1.9947 0 7661400 2687900 4973600 32973 1754 12516 12863 51334;51335 51335 SSTAISSIAADGEFLHELEEK 21 1 0 Unmodified _SSTAISSIAADGEFLHELEEK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.3721 3 745.365617 2233.07502 71596.63 1.0092 0.00075221 -0.18307 -0.00013645 0.82611 0.00061575 745.365439406268 748.371222409214 112.1 0.48999 112.1 111.86 112.35 -7.6294E-06 193 34 8 0 0 0 3.4289E-07 2 70641 52.72 52.72 1 1.4967 1.4895 0 19032000 7658500 11373000 32974 39 12517 12864 51336;51337 51336 SSTAISSIAADGEFLHELEEK 21 1 0 Unmodified _SSTAISSIAADGEFLHELEEK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.3718 3 745.365617 2233.07502 71323.66 0.85854 0.00063993 -0.33134 -0.00024697 0.5272 0.00039296 745.699580744636 748.370876188624 123.23 0.61332 123.23 123.05 123.66 0 110 26 9 0 0 0 0.00025874 2 72716 35.421 35.421 1 1.3235 1.0795 0 5840800 2490600 3350200 32975 39 12517 12864 51338;51339 51338 SSTATHPPGPAVQLNK 16 1 0 Unmodified _SSTATHPPGPAVQLNK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.923 2 802.923186 1603.83182 NaN NaN NaN 0.29565 0.00023739 NaN NaN NaN NaN 35.582 0.27321 35.582 35.37 35.643 0 0 0 0 0.00021916 1 17818 70.942 56.823 1 NaN NaN 0 8339100 8339100 0 32976 1740 12518 12865 51340 51340 SSTATHPPGPAVQLNK 16 1 0 Unmodified _SSTATHPPGPAVQLNK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.9324 2 802.923186 1603.83182 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.712 1 35.712 35.212 36.212 3.8147E-06 0 0 0 7.2105E-12 1 18006 110.93 83.451 1 32977 1740 12518 12865 51341 51341 SSTATHPPGPAVQLNK 16 1 0 Unmodified _SSTATHPPGPAVQLNK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.9314 2 802.923186 1603.83182 68975.7 0.89859 0.0007215 0.53841 0.0004323 1.437 0.0011538 802.923764007168 806.930679779534 34.656 0.32142 34.656 34.487 34.809 0 110 27 6 0 0 0 3.8761E-07 3 17543 112.7 112.7 1 0.88126 0.88684 0 27631000 15946000 11684000 32978 1740 12518 12865 51342;51343;51344 51344 SSTATHPPGPAVQLNK 16 1 0 Unmodified _SSTATHPPGPAVQLNK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.2897 3 535.617883 1603.83182 82919.83 0.35385 0.00018953 0.44735 0.00023961 0.8012 0.00042914 535.618043408394 538.289626059175 40.711 0.65316 40.711 40.347 41 0 318 53 8 0 0 0 0.027038 1 18823 20.389 16.146 1 1.4903 1.1635 0 12006000 4145700 7860700 32979 1740 12518 12865 51345 51345 SSTDFSELEQPR 12 0 1 Unmodified _SSTDFSELEQPR_ 0 0 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3278 2 698.32297 1394.63139 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.683 1 60.683 60.183 61.183 0 0 0 0 0.020593 1 34632 51.092 43.152 1 32980 300 12519 12866 51346 51346 SSTDFSELEQPR 12 0 1 Unmodified _SSTDFSELEQPR_ 0 0 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3277 2 698.32297 1394.63139 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.848 1 60.848 60.348 61.348 0 0 0 0 0.026862 1 34735 47.559 27.772 1 32981 300 12519 12866 51347 51347 SSTDFSELEQPR 12 0 1 Unmodified _SSTDFSELEQPR_ 0 0 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.328 2 698.32297 1394.63139 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.631 1 59.631 59.131 60.131 0 0 0 0 0.0094922 1 34716 57.348 48.93 1 32982 300 12519 12866 51348 51348 SSTEIPLETCCSSELK 16 1 0 Unmodified _SSTEIPLETCCSSELK_ 0 0 0 Q8NCN4 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 924.926 2 920.918791 1839.82303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.26 1 87.26 86.76 87.76 0 0 0 0 0.01823 1 47143 43.544 32.011 1 32983 1923 12520 12867 51349 51349 SSTFSDVEAHFR 12 0 1 Unmodified _SSTFSDVEAHFR_ 0 0 0 Q8ND82 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.8857 3 461.549357 1381.62624 89957.92 0.42144 0.00019451 -0.28684 -0.00013239 0.1346 6.2124E-05 461.549201381986 464.885337875029 65.975 0.57214 65.975 65.614 66.186 0 211 53 5 0 0 0 0.015765 1 38069 32.439 29.242 1 0.97961 0.99987 0 18786000 9118800 9666900 32984 1924 12521 12868 51350 51350 SSTFSDVEAHFR 12 0 1 Unmodified _SSTFSDVEAHFR_ 0 0 0 Q8ND82 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.8852 3 461.549357 1381.62624 88886.66 0.32232 0.00014876 -0.39238 -0.0001811 -0.070061 -3.2337E-05 461.549139690611 464.885250154906 75.513 0.6618 75.513 75.146 75.808 0 211 47 7 0 0 0 0.047982 1 40106 20.733 20.351 1 1.5866 1.3428 0 4961100 2082900 2878300 32985 1924 12521 12868 51351 51351 SSTGEASENGLEDIDR 16 0 1 Unmodified _SSTGEASENGLEDIDR_ 0 0 0 Q9BQ70;Q9H7D3;H3BSP8;H3BTU3;H3BS87;H3BMJ8 Q9BQ70 Q9BQ70 TCF25 Transcription factor 25 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.3771 2 840.371377 1678.7282 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.048 1 50.048 49.548 50.548 0 0 0 0 0.0001405 1 27609 83.314 76.655 1 32986 1996 12522 12869 51352 51352 SSTGEASENGLEDIDR 16 0 1 Unmodified _SSTGEASENGLEDIDR_ 0 0 0 Q9BQ70;Q9H7D3;H3BSP8;H3BTU3;H3BS87;H3BMJ8 Q9BQ70 Q9BQ70 TCF25 Transcription factor 25 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.3754 2 840.371377 1678.7282 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.323 1 49.323 48.823 49.823 3.8147E-06 0 0 0 0.0023665 1 27733 55.314 46.31 1 32987 1996 12522 12869 51353 51353 SSTGPEPPAPTPLLAER 17 0 1 Unmodified _SSTGPEPPAPTPLLAER_ 0 0 0 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8;I3L1I8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 860.9514 2 860.449234 1718.88391 66883.02 0.99837 0.00085905 -0.12812 -0.00011024 0.87025 0.00074881 860.449438250014 865.453128262354 85.147 0.57615 85.147 84.85 85.427 -7.6294E-06 260 47 8 0 0 0 0.00068262 3 51001 46.159 46.159 1 1.0919 1.1873 0 50675000 25170000 25505000 32988 619 12523 12870 51354;51355;51356 51356 SSTGPEPPAPTPLLAER 17 0 1 Unmodified _SSTGPEPPAPTPLLAER_ 0 0 0 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8;I3L1I8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.4501 2 860.449234 1718.88391 66604.73 0.7624 0.00065601 0.24908 0.00021432 1.0115 0.00087033 860.449863462773 865.95462415501 84.166 0.5655 84.166 83.921 84.487 0 246 45 8 0 0 0 6.6809E-05 3 51576 72.891 72.891 1 1.0641 1.2159 0 50371000 25630000 24740000 32989 619 12523 12870 51357;51358;51359 51359 SSTGPEPPAPTPLLAER 17 0 1 Unmodified _SSTGPEPPAPTPLLAER_ 0 0 0 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8;I3L1I8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 860.4521 2 860.449234 1718.88391 66876.35 0.70461 0.00060628 0.68269 0.00058742 1.3873 0.0011937 860.449966243181 865.453574779206 97.414 0.59834 97.414 97.1 97.698 0 154 30 8 0 0 0 0.019405 1 54767 25.718 25.718 1 0.7535 0.64239 0 5567500 3127600 2440000 32990 619 12523 12870 51360 51360 SSTGPEPPAPTPLLAER 17 0 1 Unmodified _SSTGPEPPAPTPLLAER_ 0 0 0 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8;I3L1I8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 860.9495 2 860.449234 1718.88391 65815.49 0.30439 0.00026191 0.74838 0.00064394 1.0528 0.00090585 860.450213869579 865.453498337604 97.216 0.59425 97.216 96.929 97.523 -7.6294E-06 142 28 7 0 0 0 0.0013244 1 53859 41.644 41.644 1 0.76961 0.6385 0 5139500 2713900 2425600 32991 619 12523 12870 51361 51361 SSTPAQLAFMR 11 0 1 Oxidation (M) _SSTPAQLAFM(ox)R_ SSTPAQLAFM(1)R SSTPAQLAFM(88.95)R 0 1 0 A6NEM2;P51610;H7C1C4 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.8089 2 612.805705 1223.59686 85761.55 0.42182 0.00025849 -0.86079 -0.0005275 -0.43897 -0.000269 612.804836538977 617.809201369849 59.691 0.24603 59.691 59.529 59.775 -3.8147E-06 49 19 4 0 0 0 0.00014003 1 33992 88.948 73.286 1 1.7082 1.7897 0 10929000 3984000 6945300 32992 680 12524 12871 51362 51362 526 SSTPAQLAFMR 11 0 1 Oxidation (M) _SSTPAQLAFM(ox)R_ SSTPAQLAFM(1)R SSTPAQLAFM(41.88)R 0 1 0 A6NEM2;P51610;H7C1C4 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8088 2 612.805705 1223.59686 82711.41 0.58962 0.00036132 0.24324 0.00014906 0.83286 0.00051038 612.80573580797 617.809385170308 58.48 0.22974 58.48 58.329 58.559 0 31 16 5 0 0 0 0.011708 1 34024 41.876 32.519 1 1.4408 1.4319 0 11865000 4599600 7265400 32993 680 12524 12871 51363 51363 526 SSTPLPTISSSAENTR 16 0 1 Unmodified _SSTPLPTISSSAENTR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.4182 2 824.412848 1646.81114 67440.84 0.59129 0.00048747 0.45279 0.00037328 1.0441 0.00086075 824.41311070179 829.417499029204 64.285 0.72761 64.285 63.991 64.719 0 395 64 8 0 0 0 6.2411E-05 2 36765 96.82 96.82 1 1.0378 1.1738 0 103800000 45306000 58495000 32994 334;1562 12525 12872 51364;51365 51364 SSTPLPTISSSAENTR 16 0 1 Unmodified _SSTPLPTISSSAENTR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.4148 2 824.412848 1646.81114 67632.25 0.76271 0.00062879 0.02328 1.9193E-05 0.78599 0.00064798 824.412819410924 829.417221847337 63.23 0.78062 63.23 62.905 63.686 0 425 65 10 0 0 0 3.9259E-05 2 36959 98.105 98.105 1 1.159 1.3192 0 111740000 53254000 58484000 32995 334;1562 12525 12872 51366;51367 51366 SSTPLPTISSSAENTR 16 0 1 Unmodified _SSTPLPTISSSAENTR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 829.4189 2 824.412848 1646.81114 66761.47 0.83997 0.00069249 -0.041948 -3.4582E-05 0.79803 0.0006579 824.412665032281 829.416919468452 74.167 0.80067 74.167 73.786 74.586 -7.6294E-06 363 52 10 0 0 0 0.0021027 2 39143 56.087 56.087 1 1.1688 0.98085 0 26012000 12058000 13954000 32996 334;1562 12525 12872 51368;51369 51368 SSTPLPTISSSAENTR 16 0 1 Unmodified _SSTPLPTISSSAENTR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.4196 2 824.412848 1646.81114 66883.88 0.63791 0.0005259 0.073698 6.0757E-05 0.71161 0.00058666 824.412826401675 829.417057150683 74.551 0.716 74.551 74.234 74.95 -7.6294E-06 290 42 10 0 0 0 0.0014492 2 38615 50.207 44.484 1 1.1085 0.96695 0 29445000 13566000 15880000 32997 334;1562 12525 12872 51370;51371 51370 SSTVATLQGTPDHGDPR 17 0 1 Unmodified _SSTVATLQGTPDHGDPR_ 0 0 0 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.9225 2 869.921372 1737.82819 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.02 1 32.02 31.52 32.52 0 0 0 0 0.0020081 1 15916 55.314 37.046 1 32998 1892 12526 12873 51372 51372 SSTVATLQGTPDHGDPR 17 0 1 Unmodified _SSTVATLQGTPDHGDPR_ 0 0 0 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.9255 2 869.921372 1737.82819 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.04 1 32.04 31.54 32.54 0 0 0 0 0.00049092 1 15925 63.091 45.724 1 32999 1892 12526 12873 51373 51373 SSTVHILSQLLR 12 0 1 Unmodified _SSTVHILSQLLR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.9344 3 451.933143 1352.7776 92953.38 0.36972 0.00016709 -0.19856 -8.9737E-05 0.17116 7.7353E-05 452.26720693011 455.269240632279 97.432 0.57437 97.432 97.014 97.588 7.6294E-06 107 44 4 0 0 0 0.013607 1 60743 33.589 31.289 1 0.5328 0.52786 0 12178000 9520600 2657500 33000 44 12527 12874 51374 51374 SSVAVLTQESFAEHR 15 0 1 Acetyl (Protein N-term) _(ac)SSVAVLTQESFAEHR_ 1 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;C9J5E5;C9JIZ1;C9JZI8;C9JHS7;C9JHZ8;C9JES8;C9JT62;C9JK79;C9JMQ6;C9JQ82;C9JBS3;C9JEJ8;C9JHN6;C9JHS9;C9J739 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 856.9267 2 851.923383 1701.83221 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.56 1 110.56 110.06 111.06 7.6294E-06 0 0 0 8.6145E-05 1 62979 82.362 59.445 1 33001 154 12528 12875 51375 51375 SSVINTLR 8 0 1 Unmodified _SSVINTLR_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 445.2582 2 445.258717 888.50288 90727.01 0.37072 0.00016506 0.070125 3.1224E-05 0.44084 0.00019629 445.258587368151 450.262808778981 43.301 0.86636 43.301 42.856 43.722 -3.8147E-06 218 70 4 0 0 0 0.0084049 1 23479 78.77 35.556 1 1.0313 1.1151 0 26925000 13268000 13658000 33002 1721 12529 12876 51376 51376 SSVINTLR 8 0 1 Unmodified _SSVINTLR_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 450.2629 2 445.258717 888.50288 90741.7 -0.096612 -4.3018E-05 0.36678 0.00016331 0.27017 0.0001203 445.258649407194 450.26288530608 50.817 0.88132 50.817 50.305 51.186 -3.8147E-06 245 61 6 0 0 0 0.0022675 2 24906 101.33 29.612 1 1.2476 1.0567 0 5014200 2273600 2740600 33003 1721 12529 12876 51377;51378 51377 SSVINTLR 8 0 1 Unmodified _SSVINTLR_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 450.2628 2 445.258717 888.50288 90193.49 -0.17552 -7.8153E-05 0.17382 7.7395E-05 -0.001702 -7.5782E-07 445.258639859162 450.262868960845 50.931 0.82616 50.931 50.495 51.322 0 254 58 6 0 0 0 0.012587 1 24413 67.277 33.464 1 1.2536 1.0921 0 4260500 1960500 2300000 33004 1721 12529 12876 51379 51379 SSVLIAQQTDTSDPEK 16 1 0 Unmodified _SSVLIAQQTDTSDPEK_ 0 0 0 B4DY16;A0A024R1U0;P46060;B4E0U0;Q9BSK3 B4DY16 B4DY16 RANGAP1 Ran GTPase-activating protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.933 2 859.925788 1717.83702 NaN NaN NaN 0.0092915 7.99E-06 NaN NaN NaN NaN 51.518 0.54055 51.518 51.201 51.741 -3.8147E-06 0 0 0 1.1619E-47 1 28460 167.71 145.68 1 NaN NaN 0 9260400 0 9260400 33005 90 12530 12877 51380 51380 SSVLIAQQTDTSDPEK 16 1 0 Unmodified _SSVLIAQQTDTSDPEK_ 0 0 0 B4DY16;A0A024R1U0;P46060;B4E0U0;Q9BSK3 B4DY16 B4DY16 RANGAP1 Ran GTPase-activating protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.4297 2 859.925788 1717.83702 66329.07 0.67203 0.00057789 0.11676 0.0001004 0.78878 0.00067829 859.925445282042 864.434828278317 50.374 0.35056 50.374 50.104 50.455 -3.8147E-06 133 34 6 0 0 0 1.6656E-18 2 28434 137.16 121.96 1 2.3738 2.4629 0 24727000 6103900 18623000 33006 90 12530 12877 51381;51382 51382 SSVNCPFSSQDMK 13 1 0 Oxidation (M) _SSVNCPFSSQDM(ox)K_ SSVNCPFSSQDM(1)K SSVNCPFSSQDM(91.31)K 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.8237 2 751.816141 1501.61773 70379.23 0.50679 0.00038102 -0.13044 -9.8064E-05 0.37636 0.00028295 751.816315001169 755.823247530482 34.039 0.84308 34.039 33.494 34.337 3.8147E-06 354 81 6 0 0 0 5.5824E-05 2 16824 91.313 89.902 1 1.6949 1.6693 0 24259000 10058000 14201000 33007 1691 12531 12878 51383;51384 51384 1520 SSVNCPFSSQDMK 13 1 0 Oxidation (M) _SSVNCPFSSQDM(ox)K_ SSVNCPFSSQDM(1)K SSVNCPFSSQDM(147.3)K 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.8239 2 751.816141 1501.61773 69094.13 0.3091 0.00023238 -0.14626 -0.00010996 0.16283 0.00012242 751.816222937742 755.823289446491 33.385 0.56354 33.385 33.082 33.646 0 265 47 8 0 0 0 1.8392E-19 2 16628 147.3 145.89 1 1.6406 1.825 0 50886000 18756000 32130000 33008 1691 12531 12878 51385;51386 51386 1520 SSVNCPFSSQDMK 13 1 0 Oxidation (M) _SSVNCPFSSQDM(ox)K_ SSVNCPFSSQDM(1)K SSVNCPFSSQDM(58.83)K 0 1 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.3453 2 751.816141 1501.61773 71490.27 0.26197 0.00019695 -0.11292 -8.4893E-05 0.14905 0.00011206 751.815388985392 755.823342997663 38.962 0.61064 38.962 38.665 39.275 -3.8147E-06 200 47 6 0 0 0 0.010294 1 17333 58.829 58.829 1 1.1645 0.94993 0 5937300 2679400 3257900 33009 1691 12531 12878 51387 51387 1520 SSVQEECVSTISSSK 15 1 0 Unmodified _SSVQEECVSTISSSK_ 0 0 0 Q7L0Y3;C9JVB6 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.3848 2 814.377617 1626.74068 NaN NaN NaN 0.26071 0.00021232 NaN NaN NaN NaN 38.123 0.36485 38.123 37.948 38.313 0 0 0 0 5.9305E-11 1 19459 116.03 106.7 1 NaN NaN 0 6973400 0 6973400 33010 1871 12532 12879 51388 51388 SSVQEECVSTISSSK 15 1 0 Unmodified _SSVQEECVSTISSSK_ 0 0 0 Q7L0Y3;C9JVB6 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.3782 2 814.377617 1626.74068 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.09 1 38.09 37.59 38.59 0 0 0 0 0.00047985 1 19501 80.69 62.378 1 33011 1871 12532 12879 51389 51389 SSVQEECVSTISSSK 15 1 0 Unmodified _SSVQEECVSTISSSK_ 0 0 0 Q7L0Y3;C9JVB6 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.3851 2 814.377617 1626.74068 68799.73 0.77726 0.00063299 -0.1646 -0.00013404 0.61267 0.00049894 814.377075496327 818.384756881814 37.169 0.33839 37.169 36.993 37.332 0 91 27 5 0 0 0 4.4612E-15 2 19208 127.56 127.56 1 1.6136 1.6879 0 10365000 4776900 5587600 33012 1871 12532 12879 51390;51391 51390 SSVQEECVSTISSSKDEDPLAATR 24 1 1 Unmodified _SSVQEECVSTISSSKDEDPLAATR_ 0 0 1 Q7L0Y3;C9JVB6 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 872.08 3 866.072945 2595.197 65691.72 0.33341 0.00028876 0.31219 0.00027038 0.6456 0.00055913 866.408197876707 872.414839210989 80.615 0.28516 80.615 80.419 80.704 0 42 20 4 0 0 0 0.054407 1 42694 13.072 13.072 1 1.8826 1.6015 0 3157200 1390400 1766800 33013 1871 12533 12880 51392 51392 SSVSDAPVHITASGEPVPISEESEELDQK 29 1 0 Unmodified _SSVSDAPVHITASGEPVPISEESEELDQK_ 0 0 0 O14646;H0Y8V4;A0A087WVF4 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1013.8227 3 1013.15432 3036.44113 60038.82 0.59353 0.00060134 -0.12906 -0.00013076 0.46447 0.00047058 1013.82284634383 1016.15977482039 91.615 0.57502 91.615 91.405 91.98 0 296 46 10 0 0 0 4.1873E-07 2 55643 43.936 43.936 1 0.702 0.75837 0 35129000 22207000 12922000 33014 1366 12534 12881 51393;51394 51394 SSVSDAPVHITASGEPVPISEESEELDQK 29 1 0 Unmodified _SSVSDAPVHITASGEPVPISEESEELDQK_ 0 0 0 O14646;H0Y8V4;A0A087WVF4 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1013.4903 3 1013.15432 3036.44113 59994.69 0.54606 0.00055324 0.19743 0.00020002 0.74349 0.00075327 1013.82290010293 1015.82633971199 91.049 0.51821 91.049 90.796 91.314 0 318 44 9 0 0 0 2.0167E-19 4 56273 78.3 78.3 1 0.71854 0.8088 0 56858000 35098000 21760000 33015 1366 12534 12881 51395;51396;51397;51398 51398 SSVSDAPVHITASGEPVPISEESEELDQK 29 1 0 Unmodified _SSVSDAPVHITASGEPVPISEESEELDQK_ 0 0 0 O14646;H0Y8V4;A0A087WVF4 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1013.1552 3 1013.15432 3036.44113 60599.32 0.36553 0.00037033 0.14417 0.00014607 0.5097 0.0005164 1013.48879807906 1016.16017198951 105.36 0.42473 105.36 105.15 105.57 0 244 29 11 0 0 0 0.046295 2 60029 10.058 9.9358 1 0.93233 0.73375 0 17400000 9107700 8292800 33016 1366 12534 12881 51399;51400 51399 SSVSDAPVHITASGEPVPISEESEELDQK 29 1 0 Unmodified _SSVSDAPVHITASGEPVPISEESEELDQK_ 0 0 0 O14646;H0Y8V4;A0A087WVF4 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1013.8235 3 1013.15432 3036.44113 60179.42 0.2296 0.00023262 0.35773 0.00036244 0.58734 0.00059506 1013.48914471591 1016.16049063183 105.11 0.55069 105.11 104.85 105.4 -7.6294E-06 271 35 11 0 0 0 0.027753 1 59045 14.673 14.673 1 0.91476 0.7348 0 17427000 8722700 8704800 33017 1366 12534 12881 51401 51401 SSVTSAAAVSALAGVQDQLIEK 22 1 0 Unmodified _SSVTSAAAVSALAGVQDQLIEK_ 0 0 0 B1AK63;Q9HAF1 B1AK63 B1AK63 MEAF6 Chromatin modification-related protein MEAF6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1073.576 2 1073.07352 2144.13248 59431.41 0.44228 0.0004746 0.61874 0.00066396 1.061 0.0011386 1073.57547657674 1077.081642371 114.96 0.50334 114.96 114.63 115.13 0 177 31 8 0 0 0 1.2922E-05 2 72939 47.545 47.545 1 0.98653 1.0317 0 30047000 15085000 14962000 33018 813 12535 12882 51402;51403 51403 SSVTSAAAVSALAGVQDQLIEK 22 1 0 Unmodified _SSVTSAAAVSALAGVQDQLIEK_ 0 0 0 B1AK63;Q9HAF1 B1AK63 B1AK63 MEAF6 Chromatin modification-related protein MEAF6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1077.5825 2 1073.07352 2144.13248 60119.38 0.4625 0.00049629 0.30315 0.0003253 0.76565 0.00082159 1073.57539323752 1077.08108377569 114.43 0.40623 114.43 114.22 114.63 0 161 26 9 0 0 0 5.8166E-22 2 74391 119.45 119.45 1 0.95705 0.96492 0 26972000 13719000 13253000 33019 813 12535 12882 51404;51405 51405 SSVTSAAAVSALAGVQDQLIEK 22 1 0 Unmodified _SSVTSAAAVSALAGVQDQLIEK_ 0 0 0 B1AK63;Q9HAF1 B1AK63 B1AK63 MEAF6 Chromatin modification-related protein MEAF6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1073.076 2 1073.07352 2144.13248 58947.3 0.17653 0.00018943 0.20778 0.00022297 0.38431 0.0004124 1073.57521173604 1077.080774577 127.05 0.5771 127.05 126.75 127.33 -7.6294E-06 148 24 9 0 0 0 5.7002E-05 2 76396 40.278 40.278 1 0.72053 0.58046 0 22179000 13430000 8748700 33020 813 12535 12882 51406;51407 51406 SSVTSAAAVSALAGVQDQLIEK 22 1 0 Unmodified _SSVTSAAAVSALAGVQDQLIEK_ 0 0 0 B1AK63;Q9HAF1 B1AK63 B1AK63 MEAF6 Chromatin modification-related protein MEAF6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1073.0726 2 1073.07352 2144.13248 58806.96 0.078174 8.3886E-05 0.38736 0.00041567 0.46554 0.00049956 1073.57535057069 1077.58257135893 126.91 0.43745 126.91 126.64 127.08 0 148 19 10 0 0 0 6.7589E-07 2 75404 51.695 51.695 1 0.69671 0.55966 0 17411000 10180000 7231700 33021 813 12535 12882 51408;51409 51409 SSVVPSVILKPENIK 15 2 0 Unmodified _SSVVPSVILKPENIK_ 0 0 1 B7Z8H0;Q96F82;Q13415 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.0003 3 537.322296 1608.94506 78787.58 0.38856 0.00020878 0.39847 0.0002141 0.78703 0.00042289 537.322172316196 542.665737683709 100.38 0.35282 100.38 100.24 100.6 0 109 30 5 0 0 0 0.051475 1 56771 19.669 19.669 1 1.5456 1.3348 0 4670600 1878500 2792100 33022 1103 12536 12883 51410 51410 SSVVPSVILKPENIK 15 2 0 Unmodified _SSVVPSVILKPENIK_ 0 0 1 B7Z8H0;Q96F82;Q13415 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.6667 3 537.322296 1608.94506 77890.6 0.43776 0.00023522 0.2425 0.0001303 0.68026 0.00036552 537.321872155053 542.665768312157 100.11 0.39061 100.11 99.932 100.32 0 89 34 4 0 0 0 0.01735 1 55728 24.467 23.96 1 1.2885 1.1036 0 4253000 2394200 1858800 33023 1103 12536 12883 51411 51411 SSWNQLQDLCR 11 0 1 Unmodified _SSWNQLQDLCR_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.8286 2 703.8277 1405.64085 73831.54 0.37705 0.00026537 0.01486 1.0459E-05 0.39191 0.00027583 703.828075697306 708.832102676611 77.823 0.58184 77.823 77.509 78.09 7.6294E-06 189 43 6 0 0 0 0.00032801 3 46029 87.123 87.123 1 0.90771 0.93499 0 24652000 12212000 12440000 33024 1385 12537 12884 51412;51413;51414 51413 SSWNQLQDLCR 11 0 1 Unmodified _SSWNQLQDLCR_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.8317 2 703.8277 1405.64085 73345.73 0.45907 0.0003231 -0.15636 -0.00011005 0.3027 0.00021305 703.827893678413 708.832070925975 76.777 0.55147 76.777 76.483 77.034 0 185 40 6 0 0 0 1.1363E-08 2 46299 123.63 112.8 1 0.78704 0.83367 0 23744000 13193000 10551000 33025 1385 12537 12884 51415;51416 51415 SSWNQLQDLCR 11 0 1 Unmodified _SSWNQLQDLCR_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.8326 2 703.8277 1405.64085 72089.38 0.78365 0.00055156 -0.23913 -0.00016831 0.54452 0.00038325 703.827505456559 708.831798652514 89.337 0.61169 89.337 89.02 89.632 0 193 39 7 0 0 0 0.00030188 2 49335 88.392 79.434 1 1.6301 1.3754 0 9636300 3627900 6008400 33026 1385 12537 12884 51417;51418 51418 SSWNQLQDLCR 11 0 1 Unmodified _SSWNQLQDLCR_ 0 0 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.832 2 703.8277 1405.64085 71729.74 0.31884 0.00022441 0.12144 8.5471E-05 0.44028 0.00030988 703.827852666001 708.832069318952 89.358 0.59077 89.358 89.06 89.65 0 186 36 7 0 0 0 0.0014119 2 48604 67.704 64.003 1 1.8415 1.4899 0 10557000 3869100 6688000 33027 1385 12537 12884 51419;51420 51420 SSWPASTQEGLR 12 0 1 Unmodified _SSWPASTQEGLR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.8235 2 659.822941 1317.63133 73418.48 0.79488 0.00052448 1.2025 0.00079346 1.9974 0.0013179 659.823380804392 664.828028619235 53.412 0.82798 53.412 53.073 53.901 -3.8147E-06 269 64 6 0 0 0 0.0032401 1 29990 56.548 49.879 1 1.1424 1.302 0 118220000 52577000 65644000 33028 1914 12538 12885 51421 51421 SSWPASTQEGLR 12 0 1 Unmodified _SSWPASTQEGLR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.8237 2 659.822941 1317.63133 74018.34 0.49921 0.00032939 0.43576 0.00028752 0.93497 0.00061691 659.823046294207 664.82745303004 62.096 1.217 62.096 61.416 62.633 0 546 97 8 0 0 0 0.0029259 2 31695 57.348 53.426 1 1.5745 1.3135 0 23086000 9135300 13951000 33029 1914 12538 12885 51422;51423 51423 SSWPASTQEGLR 12 0 1 Unmodified _SSWPASTQEGLR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.823 2 659.822941 1317.63133 73239.22 0.40249 0.00026557 0.1335 8.8089E-05 0.53599 0.00035366 659.82304579737 664.827349683303 62.662 1.1439 62.662 61.979 63.123 -3.8147E-06 471 87 8 0 0 0 0.020586 2 31387 39.266 39.266 1 1.5833 1.3546 0 20589000 8463800 12125000 33030 1914 12538 12885 51424;51425 51425 SSYIAASTAKPPK 13 2 0 Unmodified _SSYIAASTAKPPK_ 0 0 1 B4DXX1;B2R713;Q7Z2T5 B4DXX1 B4DXX1 TRMT1L TRMT1-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8759 2 660.861534 1319.70852 NaN NaN NaN 0.039134 2.5862E-05 NaN NaN NaN NaN 27.754 0.42238 27.754 27.553 27.975 0 0 0 0 0.026095 1 12854 72.2 58.082 1 NaN NaN 0 7631300 0 7631300 33031 846 12539 12886 51426 51426 SSYIAASTAKPPK 13 2 0 Unmodified _SSYIAASTAKPPK_ 0 0 1 B4DXX1;B2R713;Q7Z2T5 B4DXX1 B4DXX1 TRMT1L TRMT1-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.8776 2 660.861534 1319.70852 74907.38 0.57388 0.00037926 0.44753 0.00029575 1.0214 0.00067501 660.861542620791 668.876225150854 27.143 0.41733 27.143 26.883 27.3 -1.9073E-06 55 20 5 0 0 0 0.00060199 2 12435 74.841 71.433 1 1.3677 1.5578 0 9578900 3012800 6566100 33032 846 12539 12886 51427;51428 51427 SSYLEYQK 8 1 0 Unmodified _SSYLEYQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.2545 2 509.248015 1016.48148 84556.2 0.42917 0.00021855 0.12595 6.414E-05 0.55512 0.00028269 509.247789231843 513.255024673607 35.403 0.92142 35.403 34.889 35.811 0 386 83 8 0 0 0 0.0035323 2 17725 96.492 66.325 1 0.78066 0.87947 0 125150000 66292000 58862000 33033 69 12540 12887 51429;51430 51430 SSYLEYQK 8 1 0 Unmodified _SSYLEYQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2484 2 509.248015 1016.48148 85117.48 0.74154 0.00037763 0.10084 5.135E-05 0.84237 0.00042898 509.247922151735 513.255104703324 34.461 0.75328 34.461 34.031 34.784 0 262 57 7 0 0 0 0.00032878 2 17434 133.81 92.16 1 0.77336 0.89139 0 183080000 99432000 83652000 33034 69 12540 12887 51431;51432 51432 SSYLEYQK 8 1 0 Unmodified _SSYLEYQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.2554 2 509.248015 1016.48148 84691.3 0.27396 0.00013952 0.0119 6.0598E-06 0.28586 0.00014558 509.247960498445 513.254996545601 40.483 0.86466 40.483 40.161 41.025 0 381 69 8 0 0 0 0.0015374 2 18562 108.09 78.938 1 1.7827 1.4804 0 46078000 17023000 29055000 33035 69 12540 12887 51433;51434 51433 SSYLEYQK 8 1 0 Unmodified _SSYLEYQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.2552 2 509.248015 1016.48148 84200.55 0.15346 7.8152E-05 0.073245 3.73E-05 0.22671 0.00011545 509.247978354986 513.255026838414 40.659 0.81512 40.659 40.243 41.058 0 397 66 8 0 0 0 0.014674 1 18068 62.464 42.678 1 1.7901 1.4777 0 30913000 10903000 20010000 33036 69 12540 12887 51435 51435 STAELEAEELEK 12 1 0 Unmodified _STAELEAEELEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.835 2 674.827554 1347.64056 74852.57 0.42932 0.00028971 0.38091 0.00025705 0.81023 0.00054676 674.827731602756 678.834788981182 55.676 0.87867 55.676 55.314 56.193 -3.8147E-06 378 68 7 0 0 0 1.3083E-05 2 31839 106.62 106.62 1 0.80921 0.90436 0 96717000 55772000 40945000 33037 1837 12541 12888 51436;51437 51436 STAELEAEELEK 12 1 0 Unmodified _STAELEAEELEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.8282 2 674.827554 1347.64056 73271.98 0.67688 0.00045677 0.31023 0.00020935 0.9871 0.00066612 674.827694665958 678.834600040974 66.529 1.1518 66.529 66.091 67.243 0 358 70 8 0 0 0 0.00018473 2 34456 90.827 90.827 1 1.2541 1.0139 0 23005000 9732100 13273000 33038 1837 12541 12888 51438;51439 51439 STAELEAEELEK 12 1 0 Unmodified _STAELEAEELEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.8354 2 674.827554 1347.64056 73163.05 0.49871 0.00033654 0.37341 0.00025198 0.87211 0.00058853 674.827730662319 678.834632579309 67.144 1.1373 67.144 66.671 67.808 0 345 67 8 0 0 0 3.5524E-05 2 33988 99.568 99.568 1 1.2288 0.98347 0 21147000 9482200 11665000 33039 1837 12541 12888 51440;51441 51440 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.9166 3 564.580045 1690.71831 80000.71 0.46992 0.00026531 -0.20095 -0.00011345 0.26897 0.00015186 564.580009839891 567.916012714183 34.459 0.58036 34.459 34.16 34.741 0 336 48 10 0 0 0 4.7964E-05 3 17119 74.428 74.428 1 1.4133 1.6714 0 278140000 119080000 159060000 33040 1467;1248 12542 12889 51442;51443;51444 51442 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 851.8728 2 846.366429 1690.71831 66340.02 0.52848 0.00044728 0.070852 5.9967E-05 0.59933 0.00050725 846.366509684792 851.370617343894 34.496 0.43039 34.496 34.213 34.644 0 232 34 9 0 0 0 8.9907E-05 2 17120 89.189 86.456 1 1.3949 1.5955 0 127930000 56811000 71117000 33041 1467;1248 12542 12889 51445;51446 51445 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.5803 3 564.580045 1690.71831 80082.66 0.55542 0.00031358 -0.073259 -4.1361E-05 0.48216 0.00027222 564.580118122849 567.916073263944 33.519 0.62474 33.519 33.29 33.915 0 399 51 10 0 0 0 3.9149E-05 2 16877 77.222 77.202 1 1.313 1.5231 0 320770000 135290000 185480000 33042 1467;1248 12542 12889 51447;51448 51448 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 851.3718 2 846.366429 1690.71831 66438.76 0.61862 0.00052358 0.0011684 9.8891E-07 0.61979 0.00052457 846.366398255719 851.370615588565 33.562 0.49603 33.562 33.311 33.807 0 262 40 10 0 0 0 8.4244E-18 2 16739 133.98 127.44 1 1.2088 1.3776 0 135350000 60834000 74515000 33043 1467;1248 12542 12889 51449;51450 51450 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.5801 3 564.580045 1690.71831 79815.96 0.3746 0.00021149 0.093285 5.2667E-05 0.46789 0.00026416 564.580119141697 567.916216070966 39.753 0.70476 39.753 39.421 40.126 3.8147E-06 376 52 10 0 0 0 0.00027176 2 18103 47.568 47.568 1 1.2852 1.1034 0 42923000 16616000 26307000 33044 1467;1248 12542 12889 51451;51452 51452 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 851.3699 2 846.366429 1690.71831 65864.41 0.43507 0.00036823 -0.001337 -1.1316E-06 0.43373 0.00036709 846.366274621059 851.370443964991 39.741 0.5517 39.741 39.451 40.003 0 239 39 8 0 0 0 8.9826E-05 2 18159 89.959 89.959 1 1.3758 1.1254 0 13531000 5634300 7896600 33045 1467;1248 12542 12889 51453;51454 51453 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 567.9163 3 564.580045 1690.71831 80425.61 0.3019 0.00017044 -0.18284 -0.00010323 0.11906 6.7216E-05 564.579970514742 567.916051533391 39.932 0.68112 39.932 39.603 40.284 0 377 57 10 0 0 0 4.6984E-05 2 17722 50.077 49.952 1 1.3523 1.1795 0 38248000 16086000 22162000 33046 1467;1248 12542 12889 51455;51456 51456 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 851.3693 2 846.366429 1690.71831 NaN NaN NaN -0.3169 -0.00026822 NaN NaN NaN NaN 39.905 0.53777 39.905 39.614 40.152 0 0 0 0 0.0020624 1 17767 61.375 57.843 1 NaN NaN 0 5137800 0 5137800 33047 1467;1248 12542 12889 51457 51457 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 846.3667 2 846.366429 1690.71831 NaN NaN NaN 1.4165 0.0011988 NaN NaN NaN NaN 39.889 0.62787 39.889 39.565 40.192 -3.8147E-06 0 0 0 0.0001376 1 17836 74.537 60.379 1 NaN NaN 0 4293100 4293100 0 33048 1467;1248 12542 12889 51458 51458 STAGNFLVNPLEPK 14 1 0 Unmodified _STAGNFLVNPLEPK_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.9072 2 743.898648 1485.78274 70175.91 0.63016 0.00046878 -0.045821 -3.4086E-05 0.58434 0.00043469 743.898719552679 747.906182255795 102.84 0.88448 102.84 102.38 103.26 -7.6294E-06 396 75 7 0 0 0 0.003354 2 63237 47.288 40.904 1 1.2646 1.374 0 47001000 21115000 25886000 33049 1988 12543 12890 51459;51460 51459 STAGNFLVNPLEPK 14 1 0 Unmodified _STAGNFLVNPLEPK_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.9068 2 743.898648 1485.78274 70756.48 0.95512 0.00071051 0.085178 6.3363E-05 1.0403 0.00077388 744.399975830368 747.906053616335 114.9 0.45594 114.9 114.66 115.12 0 116 21 7 0 0 0 0.00085746 1 67193 57.836 51.303 1 1.1369 0.89778 0 6027100 3014000 3013000 33050 1988 12543 12890 51461 51461 STAGNFLVNPLEPK 14 1 0 Unmodified _STAGNFLVNPLEPK_ 0 0 0 Q96SB4;A8K8B2;H3BLV9;A0A024RCU9 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 747.9063 2 743.898648 1485.78274 71614.38 0.73742 0.00054857 0.060025 4.4652E-05 0.79744 0.00059322 743.898589387947 747.906108279122 114.72 0.48438 114.72 114.48 114.96 0 98 21 8 0 0 0 0.0014606 1 66117 53.528 47.144 1 1.2359 1.0122 0 5424200 2462800 2961400 33051 1988 12543 12890 51462 51462 STANVLEETTVK 12 1 0 Unmodified _STANVLEETTVK_ 0 0 0 Q96T23;H0YER1;H0YCN2;Q05DG0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.3411 2 646.340632 1290.66671 75894.72 0.68593 0.00044334 -0.018767 -1.213E-05 0.66716 0.00043121 646.340670423635 650.347777441506 56.711 0.58766 56.711 56.434 57.022 -3.8147E-06 211 53 6 0 0 0 1.518E-37 1 31922 176.6 176.6 1 0.48999 0.5302 0 36065000 23503000 12563000 33052 1991 12544 12891 51463 51463 STANVLEETTVK 12 1 0 Unmodified _STANVLEETTVK_ 0 0 0 Q96T23;H0YER1;H0YCN2;Q05DG0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.3399 2 646.340632 1290.66671 75385.05 0.78836 0.00050955 -0.16418 -0.00010612 0.62418 0.00040343 646.34068909339 650.34788255107 66.168 0.77382 66.168 65.891 66.665 0 135 46 5 0 0 0 0.053847 1 34157 32.008 32.008 1 0.93822 0.73111 0 3746200 1854100 1892100 33053 1991 12544 12891 51464 51464 STANVLEETTVK 12 1 0 Unmodified _STANVLEETTVK_ 0 0 0 Q96T23;H0YER1;H0YCN2;Q05DG0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.3417 2 646.340632 1290.66671 75213.96 0.51919 0.00033557 0.03697 2.3895E-05 0.55616 0.00035947 646.340846675819 650.347991288276 66.577 0.86746 66.577 66.316 67.183 0 168 53 5 0 0 0 0.017968 1 33680 41.109 41.109 1 0.90153 0.71016 0 3879200 2094700 1784500 33054 1991 12544 12891 51465 51465 STAPETAIECTQAPAPASEDEK 22 1 0 Unmodified _STAPETAIECTQAPAPASEDEK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1152.5181 2 1152.02082 2302.02709 57024.59 -0.038046 -4.383E-05 0.1068 0.00012304 0.068756 7.9208E-05 1152.52263325658 1156.52960654732 58.176 0.60416 58.176 57.913 58.517 0 365 47 10 0 0 0 1.4711E-07 3 32841 61.097 61.097 1 0.74161 0.80516 0 46133000 26883000 19250000 33055 515 12545 12892 51466;51467;51468 51467 STAPETAIECTQAPAPASEDEK 22 1 0 Unmodified _STAPETAIECTQAPAPASEDEK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1152.5226 2 1152.02082 2302.02709 57013.59 -0.013065 -1.5051E-05 0.045526 5.2446E-05 0.03246 3.7395E-05 1152.52265096209 1156.52952212826 57.392 0.6552 57.392 57.04 57.696 0 374 50 10 0 0 0 0.00074872 2 33407 35.35 35.35 1 0.7269 0.80328 0 44752000 27160000 17591000 33056 515 12545 12892 51469;51470 51470 STAPLLDVFSSMLK 14 1 0 Oxidation (M) _STAPLLDVFSSM(ox)LK_ STAPLLDVFSSM(1)LK STAPLLDVFSSM(42.03)LK 0 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.9103 2 762.902542 1523.79053 74619.36 1.3226 0.001009 0.51139 0.00039014 1.8339 0.0013991 762.903159055338 766.909696516921 134 0.29715 134 133.82 134.12 0 43 14 5 0 0 0 0.0031328 1 80767 42.031 42.031 1 1.4585 1.1443 0 2061400 858890 1202500 33057 2002 12546 12893 51471 51471 1843 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 1 Unmodified _STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1151.8741 3 1148.20357 3441.58889 56837.66 0.15145 0.00017389 0.28382 0.00032588 0.43527 0.00049978 1148.87146722356 1151.8737449518 107.91 0.55106 107.91 107.66 108.22 0 177 41 7 0 0 0 7.9452E-21 1 67203 68.741 68.741 1 1.5709 1.6209 0 19967000 7586400 12381000 33058 862 12547 12894 51472 51472 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 1 Unmodified _STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1148.5405 3 1148.20357 3441.58889 56025.29 0.33717 0.00038714 0.10505 0.00012062 0.44221 0.00050775 1148.53708400033 1151.87356783471 107.3 0.55607 107.3 107.14 107.69 0 140 38 9 0 0 0 1.8408E-13 4 68516 52.276 52.276 1 1.8652 1.8697 0 18094000 5829600 12264000 33059 862 12547 12894 51473;51474;51475;51476 51476 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 1 Unmodified _STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1151.873 3 1148.20357 3441.58889 55845.68 0.31348 0.00035994 0.12828 0.00014729 0.44176 0.00050722 1148.8724406127 1152.20860289551 119.28 0.29889 119.28 119.11 119.41 0 34 12 4 0 0 0 0.0090223 1 70601 19.03 17.485 1 1.2909 1.0958 0 5177000 2047400 3129600 33060 862 12547 12894 51477 51477 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 1 Unmodified _STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR_ 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1151.8724 3 1148.20357 3441.58889 58515.78 0.2799 0.00032138 -0.81862 -0.00093994 -0.53872 -0.00061856 1148.87095521209 1151.87391106378 119.05 0.24269 119.05 118.96 119.2 0 33 8 6 0 0 0 0.00018624 3 69558 25.793 25.793 1 1.3599 1.1282 0 5223400 2661200 2562300 33061 862 12547 12894 51478;51479;51480 51478 STAYEDYYYHPPPR 14 0 1 Unmodified _STAYEDYYYHPPPR_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;B4DMD1;Q7Z334 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234;DKFZp686O0665 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.6006 3 586.930126 1757.76855 78563.71 0.36808 0.00021604 -0.18974 -0.00011136 0.17834 0.00010467 586.929915791594 590.600595095847 52.281 0.72334 52.281 51.924 52.647 0 170 54 5 0 0 0 6.252E-05 2 29008 67.997 67.419 1 1.3603 1.3655 0 16071000 8079100 7992200 33062 855 12548 12895 51481;51482 51481 STAYEDYYYHPPPR 14 0 1 Unmodified _STAYEDYYYHPPPR_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;Q6MZS5;B4DT28;B4DMD1;Q7Z334 B2R7W4 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234;DKFZp686O0665 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.2689 3 586.930126 1757.76855 78530.31 0.55309 0.00032463 -0.045127 -2.6486E-05 0.50796 0.00029814 586.929906958572 590.266742468348 51.056 0.49395 51.056 50.807 51.301 0 122 39 5 0 0 0 1.5446E-05 2 28848 88.087 88.087 1 1.4282 1.4088 0 14799000 6102200 8696700 33063 855 12548 12895 51483;51484 51484 STCIYGGAPK 10 1 0 Unmodified _STCIYGGAPK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRZ1;Q59F66;Q92841;B4DZQ7 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.2616 2 527.255317 1052.49608 80675.23 0.40561 0.00021386 -0.8974 -0.00047316 -0.49179 -0.0002593 527.255778231658 531.261669727689 29.571 0.21797 29.571 29.474 29.692 0 62 17 6 0 0 0 0.0001466 1 14319 95.815 63.86 1 1.5253 1.7099 0 65199000 28886000 36313000 33064 1009;1801 12549 12896 51485 51485 STCIYGGAPK 10 1 0 Unmodified _STCIYGGAPK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QRQ7;J3KRZ1;Q59F66;Q92841;B4DZQ7 B4DN41;Q59F66 B4DN41 DDX5;DKFZp686J01190;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.2622 2 527.255317 1052.49608 82974.12 0.59172 0.00031199 -0.53516 -0.00028217 0.056556 2.982E-05 527.255727454858 531.261740979555 29.115 0.22118 29.115 29.032 29.254 -1.9073E-06 45 13 6 0 0 0 0.00031308 1 14002 90.37 58.415 1 1.4652 1.6451 0 75669000 29384000 46285000 33065 1009;1801 12549 12896 51486 51486 STDNVLPR 8 0 1 Unmodified _STDNVLPR_ 0 0 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 456.2449 2 451.240524 900.466495 NaN NaN NaN 0.30898 0.00013943 NaN NaN NaN NaN 36.229 0.46215 36.229 35.98 36.442 0 0 0 0 0.045297 1 16189 51.787 25.564 1 NaN NaN 0 2478500 0 2478500 33066 1075 12550 12897 51487 51487 STEEAFEVFWR 11 0 1 Unmodified _STEEAFEVFWR_ 0 0 0 H7BYN4;Q02241;H0YME6;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8296 2 700.827692 1399.64083 77526.52 1.1953 0.0008377 -0.19526 -0.00013685 1 0.00070085 700.827774054372 705.832154131187 111.49 0.40819 111.49 111.26 111.67 0 90 29 5 0 0 0 0.00011853 1 70160 96.331 88.406 1 0.85785 0.87639 0 6726400 4115500 2610900 33067 1312 12551 12898 51488 51488 STEEAFEVFWR 11 0 1 Unmodified _STEEAFEVFWR_ 0 0 0 H7BYN4;Q02241;H0YME6;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3304 2 700.827692 1399.64083 76154.21 0.67944 0.00047617 0.04637 3.2497E-05 0.72581 0.00050867 701.328986865454 705.832133270522 110.82 0.41109 110.82 110.66 111.07 7.6294E-06 101 30 5 0 0 0 0.00038376 1 71396 82.749 76.446 1 0.69927 0.69507 0 8493000 4389000 4104000 33068 1312 12551 12898 51489 51489 STEEAFEVFWR 11 0 1 Unmodified _STEEAFEVFWR_ 0 0 0 H7BYN4;Q02241;H0YME6;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.8326 2 700.827692 1399.64083 74575.84 0.93873 0.00065789 0.13801 9.6718E-05 1.0767 0.00075461 701.32887718644 705.831988576717 122.66 0.46288 122.66 122.44 122.91 0 95 22 6 0 0 0 0.0081792 1 73221 51.268 51.268 1 1.7378 1.4677 0 2999400 1194300 1805100 33069 1312 12551 12898 51490 51490 STEEAFEVFWR 11 0 1 Unmodified _STEEAFEVFWR_ 0 0 0 H7BYN4;Q02241;H0YME6;H0YKQ5 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.8295 2 700.827692 1399.64083 76035.83 0.87085 0.00061032 0.1858 0.00013022 1.0567 0.00074053 701.329151314407 705.832094921514 122.49 0.49553 122.49 122.24 122.74 0 78 22 5 0 0 0 0.0073354 1 72160 52.79 48.491 1 1.5917 1.3751 0 2720800 1168200 1552600 33070 1312 12551 12898 51491 51491 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2503 2 416.25036 830.486168 93845.05 0.10659 4.437E-05 0.73316 0.00030518 0.83976 0.00034955 416.250514127824 421.254677791098 63.048 1.0196 63.048 62.506 63.526 -3.8147E-06 209 98 4 0 0 0 0.0099468 1 35999 114.59 31.299 1 0.78623 0.79113 0 17404000 8401600 9002200 33071 827;1661;1865;1828 12552 12899 51492 51492 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2504 2 416.25036 830.486168 93377.84 -0.037001 -1.5402E-05 -0.26546 -0.0001105 -0.30246 -0.0001259 416.250309163536 421.254368938241 64.666 1.3957 64.666 64.101 65.497 0 377 123 5 0 0 0 0.030002 1 37627 69.432 9.7914 1 0.76774 0.7942 0 23361000 9187300 14174000 33072 827;1661;1865;1828 12552 12899 51493 51493 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2503 2 416.25036 830.486168 94713.84 0.42158 0.00017548 -0.27054 -0.00011261 0.15104 6.2869E-05 416.250067381275 421.254154246151 143.41 1.9597 143.41 142.94 144.9 0 564 208 6 0 0 0 0.03394 1 90983 63.148 8.3611 1 0.78873 0.78364 0 8424500 4509500 3915000 33073 827;1661;1865;1828 12552 12899 51494 51494 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2502 2 416.25036 830.486168 NaN NaN NaN 0.04035 1.6796E-05 NaN NaN NaN NaN 54.666 0.87724 54.666 54.421 55.298 0 0 0 0 3.0956E-07 2 30634 137.59 33.275 1 NaN NaN 0 10861000000 10861000000 0 33074 827;1661;1865;1828 12552 12899 51495;51496 51495 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2503 2 416.25036 830.486168 NaN NaN NaN -0.26891 -0.00011193 NaN NaN NaN NaN 55.385 3.9706 55.385 55.203 59.173 -3.8147E-06 0 0 0 7.8161E-19 5 32515 164.1 51.019 1 NaN NaN 0 11141000000 11141000000 0 33075 827;1661;1865;1828 12552 12899 51497;51498;51499;51500;51501 51499 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 421.2542 2 416.25036 830.486168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.355 1 59.355 58.855 59.855 0 0 0 0 0.034936 1 33797 71.715 16.928 1 33076 827;1661;1865;1828 12552 12899 51502 51502 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2502 2 416.25036 830.486168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.085 1 61.085 60.585 61.585 3.8147E-06 0 0 0 0.018016 1 34911 79.939 8.5613 1 33077 827;1661;1865;1828 12552 12899 51503 51503 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2509 2 416.25036 830.486168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.471 1 63.471 62.971 63.971 -3.8147E-06 0 0 0 0.027538 1 36446 75.311 18.42 1 33078 827;1661;1865;1828 12552 12899 51504 51504 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.25 2 416.25036 830.486168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.513 1 69.513 69.013 70.013 0 0 0 0 0.012937 1 40386 83.377 20.66 1 33079 827;1661;1865;1828 12552 12899 51505 51505 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.2504 2 416.25036 830.486168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.333 1 98.333 97.833 98.833 0 0 0 0 0.040227 1 60098 69.432 9.7914 1 33080 827;1661;1865;1828 12552 12899 51506 51506 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2503 2 416.25036 830.486168 92762.39 0.28759 0.00011971 0.0039679 1.6516E-06 0.29156 0.00012136 416.250258816431 421.254337158205 58.291 0.59903 58.291 57.98 58.579 0 211 45 6 0 0 0 0.014426 1 33676 100.07 20.613 1 0.7198 0.82421 0 85063000 49253000 35810000 33081 827;1661;1865;1828 12552 12899 51507 51507 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2503 2 416.25036 830.486168 94877.68 0.17738 7.3835E-05 0.42155 0.00017547 0.59893 0.0002493 416.250348529678 421.254546614624 59.594 1.9291 59.594 58.891 60.82 0 422 153 5 0 0 0 0.027056 1 34885 86.512 9.1381 1 0.77182 0.85788 0 43224000 24145000 19080000 33082 827;1661;1865;1828 12552 12899 51508 51508 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.25 2 416.25036 830.486168 94877.66 0.20484 8.5266E-05 0.25121 0.00010457 0.45605 0.00018983 416.250444539877 421.254477779347 61.874 1.3375 61.874 61.285 62.622 0 308 123 5 0 0 0 0.026166 2 36527 88.35 22.212 1 0.8606 0.92551 0 25661000 11982000 13679000 33083 827;1661;1865;1828 12552 12899 51509;51510 51510 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2501 2 416.25036 830.486168 NaN NaN NaN -0.3454 -0.00014377 NaN NaN NaN NaN 53.84 5.0403 53.84 52.972 58.013 0 0 0 0 1.061E-11 6 30352 148.07 41.228 1 NaN NaN 0 10822000000 10822000000 0 33084 827;1661;1865;1828 12552 12899 51511;51512;51513;51514;51515;51516 51511 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2513 2 416.25036 830.486168 NaN NaN NaN 1.138 0.0004737 NaN NaN NaN NaN 60.927 0.44299 60.927 60.62 61.063 3.8147E-06 0 0 0 0.031834 1 35574 73.039 10.325 1 NaN NaN 0 12527000 12527000 0 33085 827;1661;1865;1828 12552 12899 51517 51517 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2507 2 416.25036 830.486168 NaN NaN NaN -0.058094 -2.4182E-05 NaN NaN NaN NaN 63.755 0.85985 63.755 63.519 64.379 0 0 0 0 0.032107 1 37729 74.439 8.3009 1 NaN NaN 0 9528100 9528100 0 33086 827;1661;1865;1828 12552 12899 51518 51518 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2511 2 416.25036 830.486168 NaN NaN NaN -0.21596 -8.9894E-05 NaN NaN NaN NaN 67.623 0.46744 67.623 67.523 67.991 0 0 0 0 0.052478 1 40047 57.102 8.3418 1 NaN NaN 0 7496200 7496200 0 33087 827;1661;1865;1828 12552 12899 51519 51519 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2505 2 416.25036 830.486168 NaN NaN NaN -0.28423 -0.00011831 NaN NaN NaN NaN 68.411 0.4829 68.411 68.097 68.58 0 0 0 0 0.03173 1 40653 67.344 13.768 1 NaN NaN 0 4753300 4753300 0 33088 827;1661;1865;1828 12552 12899 51520 51520 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2505 2 416.25036 830.486168 NaN NaN NaN 1.0422 0.0004338 NaN NaN NaN NaN 70.007 1.6252 70.007 69.442 71.068 7.6294E-06 0 0 0 0.041107 1 42105 62.715 9.0053 1 NaN NaN 0 14967000 14967000 0 33089 827;1661;1865;1828 12552 12899 51521 51521 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2499 2 416.25036 830.486168 NaN NaN NaN 0.35392 0.00014732 NaN NaN NaN NaN 71.515 0.35897 71.515 71.312 71.671 0 0 0 0 0.041107 1 42873 62.715 9.0053 1 NaN NaN 0 4265300 4265300 0 33090 827;1661;1865;1828 12552 12899 51522 51522 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.25 2 416.25036 830.486168 NaN NaN NaN -1.3068 -0.00054395 NaN NaN NaN NaN 73.717 0.80485 73.717 73.601 74.406 0 0 0 0 0.046012 1 44641 60.294 15.763 1 NaN NaN 0 5813900 5813900 0 33091 827;1661;1865;1828 12552 12899 51523 51523 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2506 2 416.25036 830.486168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.234 1 63.234 62.734 63.734 0 0 0 0 0.024379 1 37140 76.847 9.8117 1 33092 827;1661;1865;1828 12552 12899 51524 51524 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2501 2 416.25036 830.486168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.611 1 91.611 91.111 92.111 -7.6294E-06 0 0 0 0.05195 1 56725 65.672 16.912 1 33093 827;1661;1865;1828 12552 12899 51525 51525 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 416.2501 2 416.25036 830.486168 NaN NaN NaN 0.23715 9.8712E-05 NaN NaN NaN NaN 62.743 6.8659 62.743 62.369 69.235 -3.8147E-06 0 0 0 1.0339E-11 8 32139 148.28 50.685 1 NaN NaN 0 1188700000 1188700000 0 33094 827;1661;1865;1828 12552 12899 51526;51527;51528;51529;51530;51531;51532;51533 51526 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 416.2502 2 416.25036 830.486168 NaN NaN NaN 0.26279 0.00010939 NaN NaN NaN NaN 62.906 7.8697 62.906 62.384 70.254 0 0 0 0 8.2426E-19 8 31603 163.84 39.52 1 NaN NaN 0 1164300000 1164300000 0 33095 827;1661;1865;1828 12552 12899 51534;51535;51536;51537;51538;51539;51540;51541 51534 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 416.2498 2 416.25036 830.486168 NaN NaN NaN 0.82508 0.00034344 NaN NaN NaN NaN 70.391 0.65968 70.391 70.129 70.789 0 0 0 0 0.051746 1 36143 57.463 9.2899 1 NaN NaN 0 1882400 1882400 0 33096 827;1661;1865;1828 12552 12899 51542 51542 STELLIRK 8 1 1 Unmodified _STELLIRK_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.3105 2 480.297842 958.581131 87568.16 -0.047673 -2.2897E-05 0.54279 0.0002607 0.49512 0.0002378 480.297837456673 489.309424951242 30.237 0.27426 30.237 30.123 30.397 0 88 21 6 0 0 0 0.011556 2 14753 85.265 29.143 1 0.73797 0.84323 0 21352000 11727000 9624900 33097 827;1661;1865;1828 12553 12900 51543;51544 51543 STESLQANVQR 11 0 1 Unmodified _STESLQANVQR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8197 2 616.815116 1231.61568 76575.54 0.66951 0.00041296 -0.034521 -2.1293E-05 0.63499 0.00039167 616.815178693185 621.819366369798 27.999 0.9547 27.999 27.657 28.612 0 322 65 11 0 0 0 3.6752E-112 2 13001 252.77 252.77 1 0.93987 1.1161 0 883470000 448820000 434650000 33098 733 12554 12901 51545;51546 51545 STESLQANVQR 11 0 1 Unmodified _STESLQANVQR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.8193 2 616.815116 1231.61568 75548.07 0.11402 7.0327E-05 0.19112 0.00011789 0.30514 0.00018821 616.81529340794 621.819549400398 27.449 0.69471 27.449 27.3 27.995 0 196 37 11 0 0 0 1.2023E-79 2 12678 228.05 213.75 1 0.94704 1.1164 0 1172300000 566700000 605610000 33099 733 12554 12901 51547;51548 51547 STESLQANVQR 11 0 1 Unmodified _STESLQANVQR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.819 2 616.815116 1231.61568 75324.56 0.23952 0.00014774 0.075615 4.6641E-05 0.31514 0.00019438 616.815395268374 621.819201952725 31.989 0.86572 31.989 31.728 32.594 0 258 44 12 0 0 0 1.1698E-40 2 13602 189.7 189.7 1 0.78551 0.67994 0 135270000 76722000 58545000 33100 733 12554 12901 51549;51550 51550 STESLQANVQR 11 0 1 Unmodified _STESLQANVQR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.8192 2 616.815116 1231.61568 76505.45 0.46778 0.00028853 -0.17246 -0.00010638 0.29532 0.00018216 616.815209976996 621.819099069127 32.171 0.97539 32.171 31.946 32.921 0 244 47 10 0 0 0 1.0186E-40 2 13221 191.17 191.17 1 0.75265 0.65721 0 144400000 79450000 64951000 33101 733 12554 12901 51551;51552 51552 STETALYR 8 0 1 Unmodified _STETALYR_ 0 0 0 B2R8G6;A0A024R7P2;B7Z6M0;Q14318;U3KQ64;A0A0A0MTJ1 B2R8G6 B2R8G6 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.7405 2 470.740357 939.46616 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.777 1 28.777 28.277 29.277 -1.9073E-06 0 0 0 0.00044369 1 13705 107.32 62.625 1 33102 232 12555 12902 51553 51553 STETALYR 8 0 1 Unmodified _STETALYR_ 0 0 0 B2R8G6;A0A024R7P2;B7Z6M0;Q14318;U3KQ64;A0A0A0MTJ1 B2R8G6 B2R8G6 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.7405 2 470.740357 939.46616 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.822 1 28.822 28.322 29.322 1.9073E-06 0 0 0 0.029364 1 13740 63.21 39.687 1 33103 232 12555 12902 51554 51554 STFETEHAGQR 11 0 1 Unmodified _STFETEHAGQR_ 0 0 0 H0YI23;B4DMQ9;F8VU51;H0YIQ2;Q8NF45;P49750 H0YI23 H0YI23 YLPM1;FLJ00353 YLP motif-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.791 2 631.79164 1261.56873 75606.88 0.39697 0.0002508 0.17689 0.00011176 0.57386 0.00036256 631.791380302993 636.796431597369 17.202 0.34053 17.202 17.081 17.421 0 21 9 5 0 0 0 0.0020963 2 4416 62.463 57.097 1 1.009 1.0538 0 4848400 2126300 2722100 33104 1007 12556 12903 51555;51556 51556 STFSTNYR 8 0 1 Unmodified _STFSTNYR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2303 2 488.230156 974.445759 85427.73 -0.091665 -4.4753E-05 0.69815 0.00034086 0.60649 0.0002961 488.230581730901 493.234355982493 29.164 0.7026 29.164 28.719 29.422 0 162 41 9 0 0 0 0.00095127 2 14015 124.59 105.11 1 1.2526 1.4831 0 388140000 167650000 220490000 33105 316 12557 12904 51557;51558 51558 STFSTNYR 8 0 1 Unmodified _STFSTNYR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.2303 2 488.230156 974.445759 86701.96 0.45082 0.0002201 0.73901 0.00036081 1.1898 0.00058091 488.230509121058 493.234442764592 28.448 0.67337 28.448 28.235 28.908 -1.9073E-06 305 58 8 0 0 0 0.0019889 2 13550 103.91 82.225 1 1.1477 1.3239 0 235850000 101500000 134350000 33106 316 12557 12904 51559;51560 51560 STFSTNYR 8 0 1 Unmodified _STFSTNYR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 493.2329 2 488.230156 974.445759 85857.44 0.19489 9.515E-05 0.52741 0.0002575 0.7223 0.00035265 488.230349220845 493.234298945508 33.368 0.48219 33.368 33.106 33.588 -3.8147E-06 184 42 7 0 0 0 0.042651 2 14518 46.426 44.643 1 1.6388 1.3827 0 28969000 10649000 18320000 33107 316 12557 12904 51561;51562 51561 STFSTNYR 8 0 1 Unmodified _STFSTNYR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.2303 2 488.230156 974.445759 85792.05 0.14708 7.181E-05 0.50282 0.00024549 0.6499 0.0003173 488.230341565419 493.234346350551 33.597 0.36732 33.597 33.391 33.758 0 151 28 8 0 0 0 0.0080971 2 14207 80.098 68.687 1 1.7944 1.5652 0 33109000 13004000 20104000 33108 316 12557 12904 51563;51564 51564 STFVLDEFK 9 1 0 Unmodified _STFVLDEFK_ 0 0 0 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.2874 2 543.279315 1084.54408 81549.63 0.7162 0.0003891 0.53257 0.00028934 1.2488 0.00067843 543.279369732686 547.286736109657 94.479 0.96812 94.479 94.135 95.104 0 395 87 6 0 0 0 0.00092483 2 57206 92.439 81.972 1 2.3443 2.6155 0 62255000 19164000 43091000 33109 1522 12558 12905 51565;51566 51565 STFVLDEFK 9 1 0 Unmodified _STFVLDEFK_ 0 0 0 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.2875 2 543.279315 1084.54408 82246.27 0.50268 0.00027309 0.6172 0.00033531 1.1199 0.00060841 543.279484004492 547.286733219987 93.706 0.91549 93.706 93.192 94.108 0 346 80 7 0 0 0 0.0010522 2 57936 90.657 78.129 1 2.3914 2.6717 0 89001000 29660000 59341000 33110 1522 12558 12905 51567;51568 51567 STFVLDEFK 9 1 0 Unmodified _STFVLDEFK_ 0 0 0 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.279 2 543.279315 1084.54408 82210.77 0.73249 0.00039795 0.13514 7.3421E-05 0.86764 0.00047137 543.278992392377 547.286525502269 107.6 0.63318 107.6 107.29 107.93 7.6294E-06 137 35 6 0 0 0 0.04753 2 61582 39.022 35.276 1 1.3514 1.0562 0 3821400 1662500 2158900 33111 1522 12558 12905 51569;51570 51570 STFVLDEFK 9 1 0 Unmodified _STFVLDEFK_ 0 0 0 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.288 2 543.279315 1084.54408 81269.17 0.57645 0.00031317 0.41623 0.00022613 0.99268 0.0005393 543.279136930652 547.286794006196 107.46 0.63605 107.46 107.17 107.8 0 163 42 6 0 0 0 0.033207 1 60588 44.753 39.094 1 1.3666 1.0722 0 3810500 1639100 2171400 33112 1522 12558 12905 51571 51571 STGCDFAVSPK 11 1 0 Unmodified _STGCDFAVSPK_ 0 0 0 Q6IAV5;A0A024R040;P55809;E9PDW2;B7Z609 Q6IAV5 Q6IAV5 OXCT;OXCT1 Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.7758 2 584.768788 1167.52302 NaN NaN NaN 0.00047388 2.7711E-07 NaN NaN NaN NaN 40.504 0.3562 40.504 40.274 40.631 0 0 0 0 0.0018798 1 21187 79.974 63.771 1 NaN NaN 0 5314400 0 5314400 33113 35 12559 12906 51572 51572 STGCDFAVSPK 11 1 0 Unmodified _STGCDFAVSPK_ 0 0 0 Q6IAV5;A0A024R040;P55809;E9PDW2;B7Z609 Q6IAV5 Q6IAV5 OXCT;OXCT1 Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.7761 2 584.768788 1167.52302 NaN NaN NaN 0.26411 0.00015444 NaN NaN NaN NaN 39.454 0.3712 39.454 39.35 39.721 0 0 0 0 0.0029048 1 20921 70.1 54.438 1 NaN NaN 0 6915400 0 6915400 33114 35 12559 12906 51573 51573 STGEAFVQFASK 12 1 0 Unmodified _STGEAFVQFASK_ 0 0 0 Q53F48;A0A024QZK8;P31942 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.3246 2 636.31696 1270.61937 NaN NaN NaN -0.5518 -0.00035112 NaN NaN NaN NaN 73.033 1.2543 73.033 72.33 73.584 0 0 0 0 7.0317E-20 3 42977 134.57 111.83 1 NaN NaN 0 29101000 0 29101000 33115 23 12560 12907 51574;51575;51576 51576 STGEAFVQFASK 12 1 0 Unmodified _STGEAFVQFASK_ 0 0 0 Q53F48;A0A024QZK8;P31942 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.3159 2 636.31696 1270.61937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.869 1 72.869 72.369 73.369 0 0 0 0 6.4293E-07 1 42721 103.22 82.319 1 33116 23 12560 12907 51577 51577 STGEAFVQFASK 12 1 0 Unmodified _STGEAFVQFASK_ 0 0 0 Q53F48;A0A024QZK8;P31942 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3228 2 636.31696 1270.61937 76229.22 0.42668 0.0002715 -0.59815 -0.00038061 -0.17147 -0.00010911 636.316369635049 640.323528154012 71.646 1.2287 71.646 70.988 72.217 0 186 97 5 0 0 0 6.075E-09 2 42615 123.96 117.8 1 2.1091 2.19 0 33543000 7833500 25710000 33117 23 12560 12907 51578;51579 51578 STGEAFVQFASK 12 1 0 Unmodified _STGEAFVQFASK_ 0 0 0 Q53F48;A0A024QZK8;P31942 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3246 2 636.31696 1270.61937 76760.21 0.4532 0.00028838 -0.10933 -6.9566E-05 0.34387 0.00021881 636.316868134049 640.323868959263 83.152 0.98151 83.152 82.713 83.695 0 230 61 6 0 0 0 0.00050599 2 45160 69.979 69.979 1 1.4609 1.1576 0 4861400 1779400 3082000 33118 23 12560 12907 51580;51581 51580 STGEAFVQFASQEIAEK 17 1 0 Unmodified _STGEAFVQFASQEIAEK_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;H0YB39;E5RGV0;E7EN40;E5RGH4;P55795;B4DFK9 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.4553 2 921.449431 1840.88431 63561.54 0.79164 0.00072945 -0.45076 -0.00041535 0.34088 0.0003141 921.449278345131 925.456096107117 107.63 0.83751 107.63 107.25 108.09 7.6294E-06 504 63 14 0 0 0 4.8221E-09 3 66840 104.17 104.17 1 1.6014 1.8449 0 212020000 84078000 127950000 33119 1231;1617 12561 12908 51582;51583;51584 51582 STGEAFVQFASQEIAEK 17 1 0 Unmodified _STGEAFVQFASQEIAEK_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;H0YB39;E5RGV0;E7EN40;E5RGH4;P55795;B4DFK9 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.4493 2 921.449431 1840.88431 62967.58 0.62536 0.00057624 -0.31593 -0.00029111 0.30943 0.00028513 921.449259643018 925.456261012189 107.05 0.79167 107.05 106.7 107.49 0 378 54 10 0 0 0 3.5659E-34 2 68105 154.47 154.47 1 1.5908 1.8565 0 267910000 103900000 164010000 33120 1231;1617 12561 12908 51585;51586 51586 STGEAFVQFASQEIAEK 17 1 0 Unmodified _STGEAFVQFASQEIAEK_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;H0YB39;E5RGV0;E7EN40;E5RGH4;P55795;B4DFK9 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 921.951 2 921.449431 1840.88431 62854.95 0.87376 0.00080512 -0.12554 -0.00011568 0.74821 0.00068944 921.950711038853 925.456299189486 119.26 0.45941 119.26 119.04 119.5 0 150 18 11 0 0 0 4.7124E-34 2 70538 151.66 151.66 1 1.1215 0.9597 0 71595000 36198000 35397000 33121 1231;1617 12561 12908 51587;51588 51588 STGEAFVQFASQEIAEK 17 1 0 Unmodified _STGEAFVQFASQEIAEK_ 0 0 0 E9PCY7;G8JLB6;P31943;D6RIU0;D6RBM0;H0YB39;E5RGV0;E7EN40;E5RGH4;P55795;B4DFK9 E9PCY7;P55795 E9PCY7 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 921.4502 2 921.449431 1840.88431 63430.7 0.57669 0.00053139 -0.18447 -0.00016998 0.39223 0.00036142 921.449080527038 925.456306190652 119.1 0.50807 119.1 118.83 119.34 7.6294E-06 137 19 12 0 0 0 8.1788E-07 2 69508 92.636 92.636 1 1.1269 0.954 0 60128000 28792000 31336000 33122 1231;1617 12561 12908 51589;51590 51590 STGFETLVVTSEDGITK 17 1 0 Unmodified _STGFETLVVTSEDGITK_ 0 0 0 F8WAW4;Q9NYD2;B4DLL3;F1LLU7;C9JB63;Q59E94;Q6IBN4;Q53HG3;Q53GC8;A0A0C4DGA2;A0A024QZU5;O75521 F8WAW4 F8WAW4 ECI2;HCA64;PECI Enoyl-CoA delta isomerase 2, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.4597 2 892.451639 1782.88872 NaN NaN NaN -0.77528 -0.0006919 NaN NaN NaN NaN 104.6 0.31261 104.6 104.39 104.7 0 0 0 0 0.0039518 2 64560 52.101 42.986 1 NaN NaN 0 3409300 0 3409300 33123 29 12562 12909 51591;51592 51591 STGFETLVVTSEDGITK 17 1 0 Unmodified _STGFETLVVTSEDGITK_ 0 0 0 F8WAW4;Q9NYD2;B4DLL3;F1LLU7;C9JB63;Q59E94;Q6IBN4;Q53HG3;Q53GC8;A0A0C4DGA2;A0A024QZU5;O75521 F8WAW4 F8WAW4 ECI2;HCA64;PECI Enoyl-CoA delta isomerase 2, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.4589 2 892.451639 1782.88872 NaN NaN NaN -0.023458 -2.0935E-05 NaN NaN NaN NaN 103.8 0.34402 103.8 103.67 104.02 7.6294E-06 0 0 0 0.021938 1 65666 39.424 29.992 1 NaN NaN 0 4135700 0 4135700 33124 29 12562 12909 51593 51593 STGGAPTFNVTVTK 14 1 0 Unmodified _STGGAPTFNVTVTK_ 0 0 0 P07737;K7EJ44 P07737 P07737 PFN1 Profilin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.3685 2 690.361899 1378.70924 73902.11 0.71352 0.00049259 -0.10916 -7.5362E-05 0.60436 0.00041722 690.360573355222 694.368858454883 68.155 0.64687 68.155 67.735 68.381 0 225 54 7 0 0 0 2.4473E-06 1 39383 105.46 105.46 1 4.7826 5.1961 0 46888000 7585200 39303000 33125 1453 12563 12910 51594 51594 STGGAPTFNVTVTK 14 1 0 Unmodified _STGGAPTFNVTVTK_ 0 0 0 P07737;K7EJ44 P07737 P07737 PFN1 Profilin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.3683 2 690.361899 1378.70924 74483.66 0.42663 0.00029453 -0.043638 -3.0126E-05 0.38299 0.0002644 690.863455193169 694.368893248208 67.008 0.51555 67.008 66.735 67.251 0 163 44 6 0 0 0 0.00095154 1 39511 57.164 57.164 1 4.8639 5.0222 0 32827000 4113600 28713000 33126 1453 12563 12910 51595 51595 STGGAPTFNVTVTK 14 1 0 Unmodified _STGGAPTFNVTVTK_ 0 0 0 P07737;K7EJ44 P07737 P07737 PFN1 Profilin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.8713 2 690.361899 1378.70924 74012.82 0.40501 0.0002796 0.47805 0.00033003 0.88306 0.00060963 690.362442129413 694.36908265246 78.066 0.45956 78.066 77.867 78.327 0 120 28 6 0 0 0 0.0023711 1 41807 48.948 48.948 1 1.3805 1.0872 0 4030200 1742400 2287800 33127 1453 12563 12910 51596 51596 STGILGVCK 9 1 0 Unmodified _STGILGVCK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.7549 2 467.754953 933.495352 NaN NaN NaN -0.37974 -0.00017762 NaN NaN NaN NaN 47.69 0.47588 47.69 47.517 47.993 0 0 0 0 0.0050688 1 26559 75.109 59.67 1 NaN NaN 0 16874000 16874000 0 33128 1887 12564 12911 51597 51597 STGILGVCK 9 1 0 Unmodified _STGILGVCK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.762 2 467.754953 933.495352 90900.04 0.2821 0.00013195 -0.065429 -3.0605E-05 0.21667 0.00010135 467.754788945973 471.762045842721 55.603 0.67365 55.603 55.291 55.964 0 122 41 4 0 0 0 0.042514 1 27953 41.029 23.643 1 1.9943 1.6449 0 2355600 676760 1678900 33129 1887 12564 12911 51598 51598 STGLILDSGATHTTAIPVHDGYVLQQGIVK 30 1 0 Unmodified _STGLILDSGATHTTAIPVHDGYVLQQGIVK_ 0 0 0 Q6FI97;Q53FS0;O96019 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1034.557 3 1031.21893 3090.63496 60372.71 0.5435 0.00056047 -0.15618 -0.00016106 0.38732 0.00039941 1031.55367114714 1034.22457828594 104.81 0.90112 104.81 104.41 105.31 0 416 74 9 0 0 0 8.6673E-20 4 64817 79.395 79.395 1 0.7703 0.82725 0 39365000 23423000 15942000 33130 1434 12565 12912 51599;51600;51601;51602 51602 STGLILDSGATHTTAIPVHDGYVLQQGIVK 30 1 0 Unmodified _STGLILDSGATHTTAIPVHDGYVLQQGIVK_ 0 0 0 Q6FI97;Q53FS0;O96019 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1031.5544 3 1031.21893 3090.63496 60454.93 0.10037 0.0001035 0.32294 0.00033302 0.42331 0.00043652 1031.88786194395 1034.22487076967 103.42 0.79602 103.42 103.05 103.85 7.6294E-06 432 66 8 0 0 0 6.3689E-06 2 65639 36.756 36.756 1 0.77048 0.85364 0 46697000 22601000 24096000 33131 1434 12565 12912 51603;51604 51604 STGLILDSGATHTTAIPVHDGYVLQQGIVK 30 1 0 Unmodified _STGLILDSGATHTTAIPVHDGYVLQQGIVK_ 0 0 0 Q6FI97;Q53FS0;O96019 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.1714 4 773.666017 3090.63496 68485.4 0.3597 0.00027828 0.53709 0.00041553 0.89679 0.00069381 773.91719809018 776.171339414295 103.39 1.0857 103.39 102.94 104.03 0 606 91 12 0 0 0 7.1187E-11 2 65511 59.372 59.372 1 0.72504 0.81402 0 75704000 42675000 33029000 33132 1434 12565 12912 51605;51606 51606 STGLILDSGATHTTAIPVHDGYVLQQGIVK 30 1 0 Unmodified _STGLILDSGATHTTAIPVHDGYVLQQGIVK_ 0 0 0 Q6FI97;Q53FS0;O96019 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.9208 4 773.666017 3090.63496 67660.85 1.1017 0.00085233 -0.15129 -0.00011705 0.95039 0.00073528 774.167504937828 775.920176459041 114.27 0.61449 114.27 113.96 114.57 0 186 25 12 0 0 0 0.0033863 1 66772 24.192 24.192 1 1.6329 1.3832 0 59355000 22931000 36424000 33133 1434 12565 12912 51607 51607 STGLILDSGATHTTAIPVHDGYVLQQGIVK 30 1 0 Unmodified _STGLILDSGATHTTAIPVHDGYVLQQGIVK_ 0 0 0 Q6FI97;Q53FS0;O96019 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1031.5524 3 1031.21893 3090.63496 59767.16 0.45884 0.00047316 -0.43394 -0.00044748 0.0249 2.5678E-05 1031.55273324187 1034.22411038746 114.09 0.42329 114.09 113.91 114.33 0 113 16 10 0 0 0 5.7631E-20 1 65656 82.089 82.089 1 1.5571 1.2948 0 38290000 13897000 24394000 33134 1434 12565 12912 51608 51608 STGNFLTLTQAIDK 14 1 0 Unmodified _STGNFLTLTQAIDK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NVP8 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.4047 2 754.901388 1507.78822 70372.92 0.75332 0.00056868 -1.2007 -0.0009064 -0.44737 -0.00033772 755.900961213461 758.908729439189 106.17 0.73985 106.17 105.76 106.5 7.6294E-06 338 55 8 0 0 0 0.011156 1 67414 36.447 24.233 1 0.85626 0.94041 0 41722000 19359000 22363000 33135 883 12566 12913 51609 51609 STGNFLTLTQAIDK 14 1 0 Unmodified _STGNFLTLTQAIDK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NVP8 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 759.4221 2 754.901388 1507.78822 NaN NaN NaN 0.21906 0.00016537 NaN NaN NaN NaN 118.55 0.69653 118.55 118.02 118.72 -7.6294E-06 0 0 0 0.0214 1 70086 44.367 33.995 1 NaN NaN 0 3390500 0 3390500 33136 883 12566 12913 51610 51610 STGTETGSNINVNSELNPSTGNR 23 0 1 Unmodified _STGTETGSNINVNSELNPSTGNR_ 0 0 0 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1175.5465 2 1175.04929 2348.08402 59207.5 -0.15399 -0.00018095 -0.25445 -0.00029899 -0.40844 -0.00047994 1175.55023647616 1180.05407724205 62.02 0.30592 62.02 61.889 62.195 0 84 25 6 0 0 0 7.5665E-06 3 35532 47.545 43.229 1 0.66648 0.67165 0 9438800 6059800 3379000 33137 1270 12567 12914 51611;51612;51613 51611 STGTETGSNINVNSELNPSTGNR 23 0 1 Unmodified _STGTETGSNINVNSELNPSTGNR_ 0 0 0 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1175.5527 2 1175.04929 2348.08402 NaN NaN NaN -0.03279 -3.8529E-05 NaN NaN NaN NaN 61.272 0.32988 61.272 61.072 61.402 0 0 0 0 2.5013E-07 2 35813 65.467 53.552 1 NaN NaN 0 6604800 6604800 0 33138 1270 12567 12914 51614;51615 51615 STIGAYFLK 9 1 0 Unmodified _STIGAYFLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.2862 2 500.279118 998.543683 86383.29 0.55849 0.0002794 0.1929 9.6506E-05 0.7514 0.00037591 500.279071918574 504.286386543166 86.577 0.74876 86.577 86.335 87.083 0 296 53 8 0 0 0 0.0061036 2 52071 65.038 54.57 1 0.92951 1.0685 0 203610000 109020000 94595000 33139 486 12568 12915 51616;51617 51616 STIGAYFLK 9 1 0 Unmodified _STIGAYFLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.2863 2 500.279118 998.543683 86169.29 0.056642 2.8337E-05 0.53045 0.00026537 0.58709 0.00029371 500.279408019199 504.286308992603 85.397 0.66921 85.397 85.202 85.871 0 276 50 9 0 0 0 0.0025185 2 52521 74.127 64.216 1 0.88758 1.0375 0 286680000 153460000 133230000 33140 486 12568 12915 51618;51619 51619 STIGAYFLK 9 1 0 Unmodified _STIGAYFLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.2794 2 500.279118 998.543683 84202.77 0.38828 0.00019425 0.21438 0.00010725 0.60266 0.0003015 500.279192619916 504.286244466066 99.193 0.56281 99.193 98.936 99.498 0 120 29 6 0 0 0 0.0061036 3 55984 65.038 55.127 1 1.3083 1.0685 0 33446000 15165000 18281000 33141 486 12568 12915 51620;51621;51622 51620 STIGAYFLK 9 1 0 Unmodified _STIGAYFLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.2866 2 500.279118 998.543683 85485.76 0.22068 0.0001104 0.20838 0.00010425 0.42906 0.00021465 500.27927046082 504.286213871991 98.985 0.69075 98.985 98.771 99.462 0 129 41 6 0 0 0 0.013277 2 55045 56.721 47.25 1 1.3203 1.0879 0 29352000 12390000 16962000 33142 486 12568 12915 51623;51624 51624 STISTELALALR 12 0 1 Unmodified _STISTELALALR_ 0 0 0 Q2YS46;B2RDN3;Q9Y5Y2;H3BNF0;H3BNS4;H3BRK5;H3BMW1 Q2YS46 Q2YS46 NUBP1;NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8687 2 637.86936 1273.72417 78121.05 0.95973 0.00061218 0.30959 0.00019748 1.2693 0.00080966 637.868922384161 642.873570876759 108.83 0.60589 108.83 108.59 109.2 0 129 37 6 0 0 0 0.00029759 3 68104 88.495 88.495 1 1.3505 1.4118 0 10706000 4447000 6258700 33143 888 12569 12916 51625;51626;51627 51627 STISTELALALR 12 0 1 Unmodified _STISTELALALR_ 0 0 0 Q2YS46;B2RDN3;Q9Y5Y2;H3BNF0;H3BNS4;H3BRK5;H3BMW1 Q2YS46 Q2YS46 NUBP1;NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.874 2 637.86936 1273.72417 78048.57 0.65724 0.00041923 0.054302 3.4638E-05 0.71154 0.00045387 637.869118593097 642.873613027797 108.22 0.54784 108.22 107.97 108.52 0 129 38 4 0 0 0 5.6573E-06 2 69260 132.01 132.01 1 1.4572 1.4669 0 10821000 5198500 5622500 33144 888 12569 12916 51628;51629 51629 STITSREIQTAVR 13 0 2 Unmodified _STITSREIQTAVR_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7408 3 487.938845 1460.79471 86656.38 0.33112 0.00016157 0.50252 0.0002452 0.83364 0.00040677 487.938861118648 494.611144984431 36.901 0.30049 36.901 36.757 37.057 0 82 22 5 0 0 0 0.02739 1 19098 39.73 22.957 1 1.0938 1.2005 0 20414000 8015000 12399000 33145 34;1513 12570 12917 51630 51630 STLASVNIQALPDK 14 1 0 Unmodified _STLASVNIQALPDK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.912 2 728.903931 1455.79331 70368.09 0.64644 0.00047119 0.25434 0.00018539 0.90078 0.00065658 728.904485750308 732.910952767991 88.305 0.51769 88.305 87.991 88.508 0 133 39 5 0 0 0 0.00018266 1 53143 71.806 56.662 1 0.59832 0.58597 0 22158000 14403000 7755600 33146 44 12571 12918 51631 51631 STLASVNIQALPDK 14 1 0 Unmodified _STLASVNIQALPDK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.912 2 728.903931 1455.79331 NaN NaN NaN 0.40589 0.00029586 NaN NaN NaN NaN 87.518 0.41296 87.518 87.234 87.647 0 0 0 0 0.0072129 1 53821 53.967 27.452 1 NaN NaN 0 9082700 0 9082700 33147 44 12571 12918 51632 51632 STLASVNIQALPDK 14 1 0 Unmodified _STLASVNIQALPDK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.9116 2 728.903931 1455.79331 71424.6 0.52369 0.00038172 0.6504 0.00047408 1.1741 0.0008558 728.904872838923 732.911187536802 101.35 0.57727 101.35 101.09 101.67 0 207 39 7 0 0 0 0.00013865 1 57341 78.692 69.504 1 1.6293 1.2814 0 11129000 4201100 6928200 33148 44 12571 12918 51633 51633 STLASVNIQALPDK 14 1 0 Unmodified _STLASVNIQALPDK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.9114 2 728.903931 1455.79331 72100.55 0.53546 0.0003903 0.67076 0.00048892 1.2062 0.00087922 728.90494619805 732.91129749439 101.24 0.49146 101.24 100.98 101.48 0 168 29 8 0 0 0 0.01982 1 56381 34 29.3 1 1.6761 1.3717 0 8462500 3184700 5277800 33149 44 12571 12918 51634 51634 STLDIVLANK 10 1 0 Unmodified _STLDIVLANK_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.3139 2 537.313689 1072.61282 82460.6 0.70416 0.00037835 0.071689 3.852E-05 0.77585 0.00041687 537.313676225243 541.320800117651 82.477 0.48553 82.477 82.214 82.699 0 125 42 4 0 0 0 0.0026779 1 50533 67.993 67.993 1 3.5888 3.8387 0 21142000 4274500 16868000 33150 1014 12572 12919 51635 51635 STLDIVLANK 10 1 0 Unmodified _STLDIVLANK_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.3219 2 537.313689 1072.61282 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.062 1 95.062 94.562 95.562 0 0 0 0 0.039494 1 52429 47.198 29.812 1 33151 1014 12572 12919 51636 51636 STLENQNWR 9 0 1 Unmodified _STLENQNWR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.2781 2 574.278169 1146.54179 79504.49 0.54275 0.00031169 0.12974 7.4508E-05 0.67249 0.0003862 574.278138440176 579.282445593956 34.879 0.8635 34.879 34.44 35.304 0 277 74 5 0 0 0 0.0086495 1 17318 60.895 53.675 1 0.70654 0.77823 0 54930000 28465000 26465000 33152 740 12573 12920 51637 51637 STLENQNWR 9 0 1 Unmodified _STLENQNWR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.2827 2 574.278169 1146.54179 79440.25 0.55397 0.00031813 0.18365 0.00010546 0.73761 0.00042359 574.278199358863 579.282428594037 34.112 0.68434 34.112 33.66 34.345 0 221 51 6 0 0 0 1.0585E-07 2 17117 138.9 116.66 1 0.71052 0.82681 0 61759000 33199000 28560000 33153 740 12573 12920 51638;51639 51639 STLENQNWR 9 0 1 Unmodified _STLENQNWR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.2828 2 574.278169 1146.54179 78949.13 0.27257 0.00015653 -0.067614 -3.8829E-05 0.20496 0.0001177 574.278164984042 579.282295224988 40.03 0.74675 40.03 39.69 40.436 0 267 57 8 0 0 0 2.5503E-05 2 18279 113.5 99.92 1 1.6235 1.3958 0 45523000 18260000 27263000 33154 740 12573 12920 51640;51641 51640 STLENQNWR 9 0 1 Unmodified _STLENQNWR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.2786 2 574.278169 1146.54179 79460.2 0.22284 0.00012797 -0.36614 -0.00021027 -0.1433 -8.2294E-05 574.277973382882 579.282163394214 40.046 0.93025 40.046 39.758 40.689 0 349 76 8 0 0 0 0.00024092 2 17837 105.04 97.109 1 1.6487 1.4381 0 33445000 12854000 20591000 33155 740 12573 12920 51642;51643 51643 STLEPVEK 8 1 0 Unmodified _STLEPVEK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.7451 2 451.745108 901.475663 91148.91 0.089815 4.0574E-05 0.039497 1.7842E-05 0.12931 5.8416E-05 451.74508853836 455.752103330649 27.459 0.66481 27.459 27.209 27.874 0 183 40 8 0 0 0 0.009998 2 12618 73.248 40.638 1 0.77561 0.87343 0 123050000 70141000 52905000 33156 533;845 12574 12921 51644;51645 51645 STLEPVEK 8 1 0 Unmodified _STLEPVEK_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNV4;Q53FC7;B3KSM6;B2R6X5;P17066;B4DHP5;P48741 A8K5I0;Q53FC7 A8K5I0 HEL-S-103;HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.7455 2 451.745108 901.475663 89321.87 0.29175 0.0001318 0.15672 7.0799E-05 0.44847 0.0002026 451.745164325126 455.752160990045 27.024 0.5738 27.024 26.767 27.34 0 113 28 8 0 0 0 0.0036527 2 12342 96.111 47.765 1 0.79872 0.9132 0 158750000 91370000 67377000 33157 533;845 12574 12921 51646;51647 51647 STLINSLFLTDLYPER 16 0 1 Unmodified _STLINSLFLTDLYPER_ 0 0 0 A0A1B0GXJ2;C9JFT1;F8WB65;B5MD47;C9JZI2;C9IY94;C9IZU3;C9JQJ4;C9J938;C9JB25;C9J2Q4;B5MCX3;Q15019 A0A1B0GXJ2 A0A1B0GXJ2 SEPT2 Septin-2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 941.5018 2 941.501466 1880.98838 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.23 1 131.23 130.73 131.73 0 0 0 0 0.00099116 1 87801 67.456 58.727 1 33158 636 12575 12922 51648 51648 STLIQCLIR 9 0 1 Unmodified _STLIQCLIR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.3154 2 552.315709 1102.61686 82466.23 0.67003 0.00037007 0.21179 0.00011698 0.88183 0.00048705 552.316149867467 557.320149813395 98.338 0.79871 98.338 97.983 98.781 0 273 68 6 0 0 0 0.00087082 2 61450 93.195 78.414 1 0.87888 0.96009 0 37681000 21830000 15851000 33159 1742 12576 12923 51649;51650 51650 STLIQCLIR 9 0 1 Unmodified _STLIQCLIR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.3197 2 552.315709 1102.61686 81328.19 0.75096 0.00041477 -0.27378 -0.00015121 0.47718 0.00026355 552.315647910361 557.319812056468 112.35 0.59766 112.35 112.05 112.64 -7.6294E-06 158 33 8 0 0 0 0.0009829 2 65184 91.626 74.241 1 1.2164 1.0367 0 8951100 4058400 4892800 33160 1742 12576 12923 51651;51652 51652 STLIQCLIR 9 0 1 Unmodified _STLIQCLIR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 552.316 2 552.315709 1102.61686 82081.48 0.6274 0.00034652 -0.2026 -0.0001119 0.4248 0.00023462 552.315770352757 557.319947584199 112.12 0.62852 112.12 111.77 112.39 0 161 33 8 0 0 0 0.0054551 2 64105 66.682 58.341 1 1.2612 1.0521 0 6577800 2606700 3971100 33161 1742 12576 12923 51653;51654 51654 STLLLLLTGK 10 1 0 Unmodified _STLLLLLTGK_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.8452 2 529.844625 1057.6747 84102.35 0.76814 0.00040699 -0.045261 -2.3981E-05 0.72288 0.00038301 529.844483385929 533.851610734255 119.33 0.7324 119.33 119.05 119.78 -7.6294E-06 214 48 6 0 0 0 1.4212E-05 3 76716 102.07 102.07 1 0.81887 0.86083 0 16489000 8728300 7760400 33162 1926 12577 12924 51655;51656;51657 51657 STLLLLLTGK 10 1 0 Unmodified _STLLLLLTGK_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7747 2 529.844625 1057.6747 84166.12 0.50247 0.00026623 -0.12753 -6.7572E-05 0.37494 0.00019866 529.844516593315 533.851541099092 118.67 0.63453 118.67 118.43 119.06 7.6294E-06 196 39 7 0 0 0 0.00060252 2 78000 84.213 84.213 1 0.73482 0.79659 0 38981000 20997000 17984000 33163 1926 12577 12924 51658;51659 51658 STLLLLLTGK 10 1 0 Unmodified _STLLLLLTGK_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.8516 2 529.844625 1057.6747 83735.97 0.60068 0.00031827 -0.20109 -0.00010655 0.39959 0.00021172 529.844485224169 533.851505867367 131.82 0.57298 131.82 131.55 132.12 0 124 27 7 0 0 0 0.0038105 2 80003 62.823 62.823 1 0.59084 0.46859 0 4599300 2905700 1693600 33164 1926 12577 12924 51660;51661 51661 STLLLLLTGK 10 1 0 Unmodified _STLLLLLTGK_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.8519 2 529.844625 1057.6747 84237.73 0.81582 0.00043226 0.085996 4.5564E-05 0.90181 0.00047782 529.844620959136 533.851707642758 131.5 0.59401 131.5 131.28 131.87 0 96 22 6 0 0 0 0.0084824 2 78861 56.013 56.013 1 0.61756 0.48095 0 3585800 1909300 1676500 33165 1926 12577 12924 51662;51663 51663 STLLLNLDFGEPPPKK 16 2 0 Acetyl (Protein N-term) _(ac)STLLLNLDFGEPPPKK_ 1 0 1 Q9H9L3 Q9H9L3 Q9H9L3 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 914.0177 2 906.001102 1809.98765 70344.38 0.98561 0.00089296 -0.55521 -0.00050302 0.43039 0.00038994 906.001068361567 914.015410369788 126.62 0.3636 126.62 126.41 126.77 0 67 26 6 0 0 0 0.00048655 1 82389 59.57 59.57 1 2.0121 2.2283 0 3980600 1891200 2089500 33166 2046 12578 12925 51664 51664 STLLLNLDFGEPPPKK 16 2 0 Acetyl (Protein N-term) _(ac)STLLLNLDFGEPPPKK_ 1 0 1 Q9H9L3 Q9H9L3 Q9H9L3 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.0175 2 906.001102 1809.98765 66495.35 0.82493 0.00074739 -0.22407 -0.00020301 0.60086 0.00054438 906.001404942409 914.015791504702 126.21 0.36532 126.21 126.02 126.38 -7.6294E-06 61 22 5 0 0 0 6.0428E-06 1 84164 91.961 91.961 1 1.2723 1.4544 0 6236800 2208500 4028300 33167 2046 12578 12925 51665 51665 STLQQLLQLPQGEEEIPEQIANTETTEDVK 30 1 0 Unmodified _STLQQLLQLPQGEEEIPEQIANTETTEDVK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1130.9103 3 1127.90177 3380.68349 57103.13 0.31492 0.0003552 0.38632 0.00043574 0.70124 0.00079093 1128.23654963587 1130.90741786179 126.3 0.44398 126.3 126.08 126.52 7.6294E-06 198 34 7 0 0 0 6.2621E-05 2 82151 35.215 35.215 1 0.81606 0.84245 0 29052000 17085000 11967000 33168 908 12579 12926 51666;51667 51667 STLSNQLLGR 10 0 1 Unmodified _STLSNQLLGR_ 0 0 0 O75616;J3QSB2;J3QRV9;J3QT61 O75616 O75616 ERAL1 GTPase Era, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.807 2 544.806562 1087.59857 80749.83 0.49996 0.00027238 0.7246 0.00039476 1.2246 0.00066715 544.806639431693 549.810937733545 61.451 0.46143 61.451 61.247 61.708 3.8147E-06 113 36 4 0 0 0 0.00368 2 35132 63.419 55.494 1 1.4794 1.5023 0 15035000 7027400 8007600 33169 1410 12580 12927 51668;51669 51669 STLSNQLLGR 10 0 1 Unmodified _STLSNQLLGR_ 0 0 0 O75616;J3QSB2;J3QRV9;J3QT61 O75616 O75616 ERAL1 GTPase Era, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.8111 2 544.806562 1087.59857 81470.37 0.32879 0.00017913 0.95569 0.00052066 1.2845 0.00069979 544.806685874 549.811210283468 60.178 0.58668 60.178 59.841 60.428 0 94 37 5 0 0 0 4.0628E-08 2 35068 117.72 117.72 1 1.2819 1.286 0 17496000 7636600 9859700 33170 1410 12580 12927 51670;51671 51670 STLTDSLVCK 10 1 0 Unmodified _STLTDSLVCK_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.2936 2 562.286814 1122.55907 NaN NaN NaN -0.2681 -0.00015075 NaN NaN NaN NaN 57.755 0.88474 57.755 57.419 58.303 0 0 0 0 0.00089136 1 32537 88.948 63.374 1 NaN NaN 0 49701000 0 49701000 33171 1478 12581 12928 51672 51672 STLTDSLVCK 10 1 0 Unmodified _STLTDSLVCK_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.2931 2 562.286814 1122.55907 81526.03 0.67062 0.00037708 0.055967 3.1469E-05 0.72658 0.00040855 562.286934175063 566.293767178317 66.738 0.81072 66.738 66.396 67.207 0 205 51 8 0 0 0 0.055642 1 34558 35.511 35.511 1 2.3926 1.9219 0 7905300 2449000 5456300 33172 1478 12581 12928 51673 51673 STLTDSLVCK 10 1 0 Unmodified _STLTDSLVCK_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.2936 2 562.286814 1122.55907 81952.77 0.45692 0.00025692 0.18865 0.00010607 0.64557 0.00036299 562.286973858079 566.293873519238 67.187 0.66406 67.187 66.905 67.569 0 183 37 8 0 0 0 0.028407 2 34068 43.442 39.508 1 2.1526 1.7612 0 5494200 1537900 3956300 33173 1478 12581 12928 51674;51675 51674 STLYVSPHPDAFPSLR 16 0 1 Acetyl (Protein N-term) _(ac)STLYVSPHPDAFPSLR_ 1 0 0 A0A024RCN6;P26640;B4DT32;A0A140T954;A2ABF4;A0A0G2JJT9 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.9704 2 914.965051 1827.91555 NaN NaN NaN -0.2932 -0.00026826 NaN NaN NaN NaN 109.08 0.4399 109.08 108.9 109.34 0 0 0 0 0.0013918 2 70021 66.393 55.738 1 NaN NaN 0 10561000 0 10561000 33174 363 12582 12929 51676;51677 51676 STLYVSPHPDAFPSLR 16 0 1 Acetyl (Protein N-term) _(ac)STLYVSPHPDAFPSLR_ 1 0 0 A0A024RCN6;P26640;B4DT32;A0A140T954;A2ABF4;A0A0G2JJT9 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 919.9706 2 914.965051 1827.91555 63745.84 0.4826 0.00044156 0.32905 0.00030107 0.81165 0.00074263 915.968321641816 919.969629959764 120.6 0.42171 120.6 120.36 120.78 0 84 19 6 0 0 0 0.00066998 2 71574 50.562 50.562 1 0.61689 0.5037 0 15676000 9425700 6250300 33175 363 12582 12929 51678;51679 51679 STLYVSPHPDAFPSLR 16 0 1 Acetyl (Protein N-term) _(ac)STLYVSPHPDAFPSLR_ 1 0 0 A0A024RCN6;P26640;B4DT32;A0A140T954;A2ABF4;A0A0G2JJT9 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 915.4667 2 914.965051 1827.91555 64272.53 0.67523 0.00061781 -0.038457 -3.5187E-05 0.63677 0.00058262 914.964728780016 919.968996248477 120.38 0.43491 120.38 120.14 120.58 0 137 25 7 0 0 0 0.00023619 2 70537 76.073 76.073 1 0.65719 0.54077 0 8509000 5521700 2987400 33176 363 12582 12929 51680;51681 51681 STMQELNSR 9 0 1 Unmodified _STMQELNSR_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.2532 2 533.253305 1064.49206 NaN NaN NaN 0.24016 0.00012807 NaN NaN NaN NaN 24.493 0.3375 24.493 24.278 24.616 0 0 0 0 0.00015154 1 10204 95.502 67.328 1 NaN NaN 0 19281000 19281000 0 + 33177 1165 12583 12930 51682 51682 STMQELNSR 9 0 1 Oxidation (M) _STM(ox)QELNSR_ STM(1)QELNSR STM(40.72)QELNSR 0 1 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.2501 2 541.250763 1080.48697 NaN NaN NaN -1.1244 -0.00060858 NaN NaN NaN NaN 27.413 0.82528 27.413 27.054 27.879 0 0 0 0 0.024376 1 10563 40.724 29.13 1 NaN NaN 0 10760000 10760000 0 + 33178 1165 12583 12931 51683 51683 883 STMQELNSR 9 0 1 Oxidation (M) _STM(ox)QELNSR_ STM(1)QELNSR STM(65.31)QELNSR 0 1 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.2507 2 541.250763 1080.48697 NaN NaN NaN -0.73199 -0.00039619 NaN NaN NaN NaN 27.459 0.73206 27.459 27.194 27.926 -1.9073E-06 0 0 0 0.0036775 1 10145 65.305 42.565 1 NaN NaN 0 2155800 2155800 0 + 33179 1165 12583 12931 51684 51684 883 STNGDTFLGGEDFDQALLR 19 0 1 Unmodified _STNGDTFLGGEDFDQALLR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1028.4829 2 1028.48453 2054.95451 59336.31 0.5112 0.00052576 0.023718 2.4394E-05 0.53491 0.00055015 1028.98616084044 1033.48856534554 115.51 0.51254 115.51 115.24 115.76 -7.6294E-06 232 35 9 0 0 0 3.243E-05 2 73437 54.898 54.898 1 2.1216 2.2211 0 39082000 10520000 28561000 33180 1092 12584 12932 51685;51686 51686 STNGDTFLGGEDFDQALLR 19 0 1 Unmodified _STNGDTFLGGEDFDQALLR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1033.4897 2 1028.48453 2054.95451 59615.55 0.51377 0.0005284 -0.065023 -6.6876E-05 0.44874 0.00046153 1028.98609418556 1033.48846223096 114.99 0.52563 114.99 114.76 115.29 7.6294E-06 213 33 9 0 0 0 8.9505E-06 2 74817 74.769 74.769 1 2.0748 2.373 0 50631000 16583000 34048000 33181 1092 12584 12932 51687;51688 51687 STNGDTFLGGEDFDQALLR 19 0 1 Unmodified _STNGDTFLGGEDFDQALLR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1033.4866 2 1028.48453 2054.95451 59284.34 0.42124 0.00043324 -0.051465 -5.2931E-05 0.36978 0.00038031 1028.48460908114 1033.9899667114 127.06 0.48447 127.06 126.78 127.26 0 128 20 9 0 0 0 0.0034162 2 76445 33.751 33.751 1 1.1711 0.99073 0 9451700 4104600 5347000 33182 1092 12584 12932 51689;51690 51689 STNGDTFLGGEDFDQALLR 19 0 1 Unmodified _STNGDTFLGGEDFDQALLR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1028.9882 2 1028.48453 2054.95451 59092.06 0.37179 0.00038238 -0.029453 -3.0292E-05 0.34233 0.00035209 1028.98640968425 1033.48827975035 126.94 0.52159 126.94 126.72 127.24 0 139 23 9 0 0 0 0.00028709 2 75472 44.44 44.44 1 1.2174 0.98652 0 10339000 4835600 5503000 33183 1092 12584 12932 51691;51692 51692 STPAITLESPDIK 13 1 0 Unmodified _STPAITLESPDIK_ 0 0 0 A0A024R4X0;P00387;B1AHF3 A0A024R4X0 A0A024R4X0 CYB5R3 NADH-cytochrome b5 reductase;NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.3723 2 686.371932 1370.72931 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.443 1 96.443 95.943 96.943 0 0 0 0 0.033607 1 53324 43.544 26.108 1 33184 164 12585 12933 51693 51693 STPGSGSGPAHGPDPAHGPASCS 23 0 0 Unmodified _STPGSGSGPAHGPDPAHGPASCS_ 0 0 0 Q9ULX9 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.6332 3 696.632703 2086.87628 NaN NaN NaN -0.29427 -0.000205 NaN NaN NaN NaN 21.516 0.3071 21.516 21.352 21.659 0 0 0 0 3.7476E-32 1 7751 94.057 84.893 1 33185 2112 12586 12934 51694 51694 STPGSGSGPAHGPDPAHGPASCS 23 0 0 Unmodified _STPGSGSGPAHGPDPAHGPASCS_ 0 0 0 Q9ULX9 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1044.4471 2 1044.44542 2086.87628 NaN NaN NaN 0.089523 9.3502E-05 NaN NaN NaN NaN 21.461 0.2368 21.461 21.389 21.626 0 0 0 0 6.063E-05 1 7756 49.929 44.946 1 33186 2112 12586 12934 51695 51695 STPGSGSGPAHGPDPAHGPASCS 23 0 0 Unmodified _STPGSGSGPAHGPDPAHGPASCS_ 0 0 0 Q9ULX9 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.6333 3 696.632703 2086.87628 NaN NaN NaN -0.21614 -0.00015057 NaN NaN NaN NaN 21.406 0.29064 21.406 21.225 21.516 1.9073E-06 0 0 0 4.2316E-20 1 7489 77.391 71.117 1 33187 2112 12586 12934 51696 51696 STPGSGSGPAHGPDPAHGPASCS 23 0 0 Unmodified _STPGSGSGPAHGPDPAHGPASCS_ 0 0 0 Q9ULX9 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1044.446 2 1044.44542 2086.87628 NaN NaN NaN -0.21538 -0.00022495 NaN NaN NaN NaN 21.35 0.24825 21.35 21.243 21.491 0 0 0 0 8.988E-07 1 7528 59.306 38.643 1 33188 2112 12586 12934 51697 51697 STPGSGSGPAHGPDPAHGPASCS 23 0 0 Unmodified _STPGSGSGPAHGPDPAHGPASCS_ 0 0 0 Q9ULX9 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.6339 3 696.632703 2086.87628 NaN NaN NaN -0.023104 -1.6095E-05 NaN NaN NaN NaN 23.881 0.44406 23.881 23.663 24.107 0 0 0 0 1.0293E-05 1 8175 40.81 38.281 1 33189 2112 12586 12934 51698 51698 STPGSGSGPAHGPDPAHGPASCS 23 0 0 Unmodified _STPGSGSGPAHGPDPAHGPASCS_ 0 0 0 Q9ULX9 Q9ULX9 Q9ULX9 MAFF Transcription factor MafF ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.6328 3 696.632703 2086.87628 NaN NaN NaN -0.14992 -0.00010444 NaN NaN NaN NaN 23.997 0.4929 23.997 23.779 24.272 0 0 0 0 0.017896 1 7753 27.61 18.446 1 33190 2112 12586 12934 51699 51699 STPLASPSPSPGR 13 0 1 Unmodified _STPLASPSPSPGR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.3279 2 627.327859 1252.64116 77922.04 0.71614 0.00044926 0.25303 0.00015873 0.96917 0.00060799 627.328133945374 632.331945152849 36.223 0.49231 36.223 35.949 36.441 -3.8147E-06 147 46 5 0 0 0 0.0003075 3 18238 65.278 41.849 1 1.9905 2.0027 0 17395000 6274900 11120000 33191 1945 12587 12935 51700;51701;51702 51701 STPLASPSPSPGR 13 0 1 Unmodified _STPLASPSPSPGR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3273 2 627.327859 1252.64116 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.368 1 35.368 34.868 35.868 0 0 0 0 0.019072 1 18038 48.188 19.789 1 33192 1945 12587 12935 51703 51703 STPLASPSPSPGR 13 0 1 Unmodified _STPLASPSPSPGR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3317 2 627.327859 1252.64116 75366.27 0.39605 0.00024846 0.21356 0.00013397 0.60962 0.00038243 627.32796774357 632.332064931357 40.986 0.49477 40.986 40.735 41.23 0 159 38 6 0 0 0 0.012576 1 18926 39.266 19.995 1 3.7996 3.2609 0 6290700 1335600 4955000 33193 1945 12587 12935 51704 51704 STPLEENVVDREQIDFLAAR 20 0 2 Unmodified _STPLEENVVDREQIDFLAAR_ 0 0 1 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.7344 3 768.060639 2301.16009 68916.27 0.70553 0.00054189 -0.30307 -0.00023277 0.40246 0.00030912 768.394951911055 775.06675173992 103.85 0.64719 103.85 103.48 104.12 0 134 51 4 0 0 0 6.7319E-05 3 64090 34.346 34.346 1 0.92343 1.0164 0 11913000 4705300 7208100 33194 1892 12588 12936 51705;51706;51707 51707 STPLEENVVDREQIDFLAAR 20 0 2 Unmodified _STPLEENVVDREQIDFLAAR_ 0 0 1 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.4019 3 768.060639 2301.16009 69771.41 0.78315 0.00060151 -0.28507 -0.00021895 0.49808 0.00038255 768.394614311457 774.732633652915 102.96 0.61127 102.96 102.7 103.31 0 176 48 7 0 0 0 2.3123E-05 3 64964 34.689 34.689 1 1.052 1.1132 0 14637000 6170000 8467200 33195 1892 12588 12936 51708;51709;51710 51709 STPLEENVVDREQIDFLAAR 20 0 2 Unmodified _STPLEENVVDREQIDFLAAR_ 0 0 1 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.0676 3 768.060639 2301.16009 67334.76 0.90298 0.00069354 -0.43829 -0.00033664 0.46468 0.0003569 768.394161008459 774.732224011322 114.99 0.41985 114.99 114.82 115.24 0 98 19 8 0 0 0 0.0040606 1 67282 19.868 19.868 1 1.8905 1.6146 0 6532300 2167300 4365000 33196 1892 12588 12936 51711 51711 STPLEENVVDREQIDFLAAR 20 0 2 Unmodified _STPLEENVVDREQIDFLAAR_ 0 0 1 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.0676 3 768.060639 2301.16009 NaN NaN NaN -0.33293 -0.00025571 NaN NaN NaN NaN 114.88 0.33715 114.88 114.71 115.05 0 0 0 0 0.028462 1 66280 30.21 22.218 1 NaN NaN 0 4223200 0 4223200 33197 1892 12588 12936 51712 51712 STPVTVVLPDTK 12 1 0 Unmodified _STPVTVVLPDTK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.8606 2 628.85846 1255.70237 77249.4 0.73328 0.00046113 0.12433 7.8183E-05 0.8576 0.00053931 628.858692263616 632.865414244346 81.774 0.73554 81.774 81.476 82.212 0 316 63 8 0 0 0 0.00082335 2 48713 65.278 59.497 1 1.0652 1.2025 0 79988000 38348000 41639000 33198 794 12589 12937 51713;51714 51714 STPVTVVLPDTK 12 1 0 Unmodified _STPVTVVLPDTK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.8611 2 628.85846 1255.70237 77441.34 0.78422 0.00049316 0.1646 0.00010351 0.94881 0.00059667 628.858705465009 632.86544422009 80.719 0.68966 80.719 80.491 81.181 0 268 56 6 0 0 0 0.00020274 2 49189 79.311 71.665 1 0.95664 1.0725 0 79255000 39281000 39975000 33199 794 12589 12937 51715;51716 51716 STQAATQVVLNVPETR 16 0 1 Unmodified _STQAATQVVLNVPETR_ 0 0 0 F8WEA6;F8WBE1;F8WAZ6;Q96CP5;B3KM34;A8K1E9;G3V0E4;O75439 F8WEA6 F8WEA6 PMPCB Mitochondrial-processing peptidase subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.4663 2 857.460133 1712.90571 NaN NaN NaN 0.26561 0.00022775 NaN NaN NaN NaN 78.78 0.085907 78.78 78.738 78.824 0 0 0 0 3.1792E-06 1 46707 83.087 69.424 1 NaN NaN 0 3447500 0 3447500 33200 703 12590 12938 51717 51717 STQGVTLTDLQEAEK 15 1 0 Unmodified _STQGVTLTDLQEAEK_ 0 0 0 F8VZN8;A0A024RBF1;B2RAH5;O14974;H0YIS4;H0YHI8 F8VZN8 F8VZN8 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.4738 2 810.409774 1618.805 68157.16 0.58499 0.00047408 -0.81363 -0.00065937 -0.22864 -0.00018529 810.408903510029 814.416898748427 74.913 0.42615 74.913 74.726 75.152 7.6294E-06 102 34 5 0 0 0 0.012817 1 43913 50.207 34.636 1 1.1776 1.2104 0 12943000 6489000 6453800 33201 336 12591 12939 51718 51718 STQGVTLTDLQEAEK 15 1 0 Unmodified _STQGVTLTDLQEAEK_ 0 0 0 F8VZN8;A0A024RBF1;B2RAH5;O14974;H0YIS4;H0YHI8 F8VZN8 F8VZN8 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.9202 2 810.409774 1618.805 68883.24 0.53084 0.0004302 -1.1162 -0.00090459 -0.58537 -0.00047439 810.408667247871 814.416823640926 73.905 0.48926 73.905 73.601 74.09 0 135 38 6 0 0 0 0.027554 1 44295 28.327 28.327 1 1.2648 1.3013 0 11629000 5941900 5686600 33202 336 12591 12939 51719 51719 STQQDIYAGSVQPILR 16 0 1 Unmodified _STQQDIYAGSVQPILR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.4721 2 888.467958 1774.92136 65158.37 0.58157 0.00051671 -0.0098535 -8.7545E-06 0.57172 0.00050795 888.969404383744 893.471942443783 88.709 0.59944 88.709 88.406 89.006 0 255 45 7 0 0 0 2.2068E-12 2 53397 120.9 113.33 1 0.81206 0.84128 0 37534000 22348000 15186000 33203 1745 12592 12940 51720;51721 51721 STQQDIYAGSVQPILR 16 0 1 Unmodified _STQQDIYAGSVQPILR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.4676 2 888.467958 1774.92136 63974.46 0.84613 0.00075176 -0.042459 -3.7724E-05 0.80367 0.00071403 888.467807144593 893.471884151127 87.823 0.52811 87.823 87.578 88.106 0 215 40 8 0 0 0 5.9705E-13 3 54048 124.12 117.15 1 0.7735 0.89951 0 62453000 33756000 28697000 33204 1745 12592 12940 51722;51723;51724 51724 STQQDIYAGSVQPILR 16 0 1 Unmodified _STQQDIYAGSVQPILR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 893.9739 2 888.467958 1774.92136 64231.44 0.3601 0.00031993 0.45431 0.00040364 0.8144 0.00072357 888.96974130546 893.472497868385 101.67 0.62415 101.67 101.35 101.98 0 265 40 10 0 0 0 3.7813E-06 2 57509 88.101 88.101 1 1.5157 1.2797 0 29451000 12124000 17327000 33205 1745 12592 12940 51725;51726 51725 STQQDIYAGSVQPILR 16 0 1 Unmodified _STQQDIYAGSVQPILR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 893.4727 2 888.467958 1774.92136 64766.32 0.14523 0.00012903 0.43496 0.00038645 0.58018 0.00051548 888.46815858524 893.472520872977 101.49 0.66256 101.49 101.22 101.88 7.6294E-06 272 45 9 0 0 0 0.00013316 2 56566 76.728 76.728 1 1.4967 1.3056 0 27073000 10804000 16268000 33206 1745 12592 12940 51727;51728 51728 STQTTNDGVCQSMCHDK 17 1 0 Unmodified _STQTTNDGVCQSMCHDK_ 0 0 0 Q15326;E7ENI9;J3QKD2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;A0A0A0MRY2;Q5UGI2;B7Z3Z1 Q15326 Q15326 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.6045 3 656.932996 1967.77716 75758.66 0.17895 0.00011756 0.18625 0.00012236 0.3652 0.00023991 657.267806997035 659.604343307996 21.322 0.29093 21.322 21.208 21.499 0 36 12 5 0 0 0 0.032184 1 5994 18.455 17.947 1 2.7594 2.4326 0 1216300 284180 932120 33207 1758 12593 12941 51729 51729 STSLETQDDDNIR 13 0 1 Unmodified _STSLETQDDDNIR_ 0 0 0 Q6IA86 Q6IA86 Q6IA86 ELP2 Elongator complex protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.3436 2 747.339349 1492.66414 NaN NaN NaN -0.061365 -4.586E-05 NaN NaN NaN NaN 34.309 0.30274 34.309 34.138 34.44 0 0 0 0 2.0823E-09 1 17150 115.57 104.82 1 NaN NaN 0 6375900 0 6375900 33208 1842 12594 12942 51730 51730 STSLETQDDDNIR 13 0 1 Unmodified _STSLETQDDDNIR_ 0 0 0 Q6IA86 Q6IA86 Q6IA86 ELP2 Elongator complex protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.3405 2 747.339349 1492.66414 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.379 1 34.379 33.879 34.879 0 0 0 0 0.0049348 1 17200 58.699 43.127 1 33209 1842 12594 12942 51731 51731 STSLETQDDDNIR 13 0 1 Unmodified _STSLETQDDDNIR_ 0 0 0 Q6IA86 Q6IA86 Q6IA86 ELP2 Elongator complex protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.3444 2 747.339349 1492.66414 NaN NaN NaN 0.064858 4.8471E-05 NaN NaN NaN NaN 33.655 0.25128 33.655 33.463 33.714 0 0 0 0 3.7017E-09 1 16883 113.44 95.932 1 NaN NaN 0 5311100 0 5311100 33210 1842 12594 12942 51732 51732 STSLETQDDDNIR 13 0 1 Unmodified _STSLETQDDDNIR_ 0 0 0 Q6IA86 Q6IA86 Q6IA86 ELP2 Elongator complex protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3387 2 747.339349 1492.66414 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.585 1 33.585 33.085 34.085 -3.8147E-06 0 0 0 0.0013892 1 16859 73.885 63.514 1 33211 1842 12594 12942 51733 51733 STSPPNHAEAIVK 13 1 0 Unmodified _STSPPNHAEAIVK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.8549 2 675.854241 1349.69393 NaN NaN NaN 0.48483 0.00032767 NaN NaN NaN NaN 24.042 0.29174 24.042 23.987 24.278 0 0 0 0 0.014534 1 9893 50.786 14.452 1 NaN NaN 0 3893900 3893900 0 + 33212 1146 12595 12943 51734 51734 STSQTFIYK 9 1 0 Unmodified _STSQTFIYK_ 0 0 0 A8K2R3;O60341;R4GMP9;R4GMQ1 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.7757 2 537.776939 1073.53933 82778.45 0.63253 0.00034016 -1.0165 -0.00054666 -0.38398 -0.0002065 537.776221980614 541.783714643752 42.93 0.4603 42.93 42.597 43.057 3.8147E-06 76 37 3 0 0 0 0.0028606 1 23285 73.26 73.26 1 0.68977 0.69369 0 13568000 8092200 5476000 33213 711 12596 12944 51735 51735 STSSFSCLSR 10 0 1 Unmodified _STSSFSCLSR_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.2594 2 566.258588 1130.50262 NaN NaN NaN -0.066182 -3.7476E-05 NaN NaN NaN NaN 37.984 0.41475 37.984 37.807 38.222 0 0 0 0 0.0020262 1 19795 82.749 40.64 1 NaN NaN 0 46105000 46105000 0 + 33214 1166 12597 12945 51736 51736 STSTSEPTTGCSLK 14 1 0 Unmodified _STSTSEPTTGCSLK_ 0 0 0 Q8ND82 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.3355 2 728.335221 1454.65589 72325.27 0.20619 0.00015017 0.33915 0.00024702 0.54534 0.00039719 728.335596252823 732.341814277079 24.554 0.30737 24.554 24.337 24.644 0 41 10 6 0 0 0 0.00020564 1 10283 68.536 65.111 1 0.73117 0.75183 0 12928000 7204400 5724000 33215 1924 12598 12946 51737 51737 STSTSEPTTGCSLK 14 1 0 Unmodified _STSTSEPTTGCSLK_ 0 0 0 Q8ND82 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.3369 2 728.335221 1454.65589 71175.46 0.48395 0.00035248 0.1687 0.00012287 0.65265 0.00047535 728.335406368875 732.342070018177 24.34 0.35796 24.34 24.156 24.514 0 54 15 6 0 0 0 2.4053E-09 2 10046 116.55 116.55 1 0.83164 0.84704 0 16991000 9139900 7851200 33216 1924 12598 12946 51738;51739 51738 STSTSEPTTGCSLK 14 1 0 Unmodified _STSTSEPTTGCSLK_ 0 0 0 Q8ND82 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.3369 2 728.335221 1454.65589 71266.16 0.64297 0.0004683 -0.37601 -0.00027386 0.26695 0.00019443 728.335155364745 732.342038172653 27.525 0.37654 27.525 27.325 27.702 1.9073E-06 62 14 7 0 0 0 0.038216 1 10694 28.806 28.806 1 1.7556 1.3923 0 4595200 1614900 2980400 33217 1924 12598 12946 51740 51740 STSTSEPTTGCSLK 14 1 0 Unmodified _STSTSEPTTGCSLK_ 0 0 0 Q8ND82 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.343 2 728.335221 1454.65589 71553.67 0.29648 0.00021594 -0.14698 -0.00010705 0.14951 0.00010889 728.334872487184 732.342150398369 27.712 0.39448 27.712 27.504 27.898 1.9073E-06 69 15 7 0 0 0 0.0005188 1 10398 60.255 57.938 1 1.7738 1.4077 0 4008200 1302500 2705700 33218 1924 12598 12946 51741 51741 STTELDDYSTNK 12 1 0 Unmodified _STTELDDYSTNK_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.3145 2 687.306986 1372.59942 NaN NaN NaN -0.26753 -0.00018387 NaN NaN NaN NaN 37.392 0.47672 37.392 37.154 37.631 0 0 0 0 0.0018377 1 16833 73.499 68.716 1 NaN NaN 0 1468900 0 1468900 33219 640 12599 12947 51742 51742 STTSTIESFAAQEK 14 1 0 Unmodified _STTSTIESFAAQEK_ 0 0 0 Q6PKC2;Q86Y74;B4DJ96;A8K3C5;J3KPP4;O95232 Q6PKC2 Q6PKC2 CROP;LUC7L3 Luc7-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.3604 2 750.364835 1498.71512 68531.28 0.69813 0.00052385 -0.62888 -0.00047189 0.069251 5.1963E-05 750.364194766088 754.371516977156 78.712 0.48753 78.712 78.503 78.99 -7.6294E-06 112 28 6 0 0 0 0.013994 1 42238 35.645 35.645 1 0.43974 0.34246 0 3341500 2143200 1198300 33220 722 12600 12948 51743 51743 STTTGHLIYK 10 1 0 Unmodified _STTTGHLIYK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;Q53GE9;Q53G85;Q53GA1;A0A087WVQ9;B4DNE0;A0A087WV01;Q9H2I7;Q05639;A6PW80;Q5JR01;Q6NS35;Q6NSH7 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8119 2 560.803488 1119.59242 80499.78 0.72958 0.00040915 -0.62095 -0.00034823 0.10863 6.0921E-05 560.803813605188 564.810386436332 26.33 1.5782 26.33 25.96 27.538 0 364 92 8 0 0 0 7.6247E-12 3 11687 141.52 103.71 1 2.5424 3.1073 0 3436100000 1001400000 2434700000 33221 1658 12601 12949 51744;51745;51746 51744 STTTGHLIYK 10 1 0 Unmodified _STTTGHLIYK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;Q53GE9;Q53G85;Q53GA1;A0A087WVQ9;B4DNE0;A0A087WV01;Q9H2I7;Q05639;A6PW80;Q5JR01;Q6NS35;Q6NSH7 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 374.2048 3 374.204751 1119.59242 95080.12 0.23381 8.7493E-05 -0.11178 -4.1828E-05 0.12203 4.5665E-05 374.204769384988 376.876130907303 26.326 0.77801 26.326 25.96 26.738 0 223 45 8 0 0 0 0.037049 1 11853 21.372 8.7957 1 2.3202 2.7102 0 277000000 79338000 197660000 33222 1658 12601 12949 51747 51747 STTTGHLIYK 10 1 0 Unmodified _STTTGHLIYK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;Q53GE9;Q53G85;Q53GA1;A0A087WVQ9;B4DNE0;A0A087WV01;Q9H2I7;Q05639;A6PW80;Q5JR01;Q6NS35;Q6NSH7 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8115 2 560.803488 1119.59242 80733.88 0.62719 0.00035173 -0.42354 -0.00023753 0.20365 0.00011421 560.803753893385 564.810517813829 25.707 1.1866 25.707 25.441 26.627 0 366 68 9 0 0 0 4.7487E-16 3 11225 151.97 112.95 1 2.3246 2.7531 0 2657000000 808540000 1848500000 33223 1658 12601 12949 51748;51749;51750 51748 STTTGHLIYK 10 1 0 Unmodified _STTTGHLIYK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;Q53GE9;Q53G85;Q53GA1;A0A087WVQ9;B4DNE0;A0A087WV01;Q9H2I7;Q05639;A6PW80;Q5JR01;Q6NS35;Q6NSH7 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.8034 2 560.803488 1119.59242 79243.69 0.40958 0.00022969 -0.29401 -0.00016488 0.11557 6.4812E-05 560.803710260627 564.81037543863 29.42 2.0028 29.42 29.119 31.122 0 606 134 11 0 0 0 1.874E-08 3 11899 122.13 83.113 1 1.5563 1.3626 0 193720000 74156000 119560000 33224 1658 12601 12949 51751;51752;51753 51752 STTTGHLIYK 10 1 0 Unmodified _STTTGHLIYK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;Q53GE9;Q53G85;Q53GA1;A0A087WVQ9;B4DNE0;A0A087WV01;Q9H2I7;Q05639;A6PW80;Q5JR01;Q6NS35;Q6NSH7 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 374.2045 3 374.204751 1119.59242 96371.7 -0.036566 -1.3683E-05 -0.082917 -3.1028E-05 -0.11948 -4.4711E-05 374.204731868574 376.876105778165 29.429 0.67359 29.429 29.193 29.867 1.9073E-06 222 46 7 0 0 0 0.038403 1 12002 19.263 12.244 1 1.5425 1.1949 0 13293000 4603200 8689800 33225 1658 12601 12949 51754 51754 STTTGHLIYK 10 1 0 Unmodified _STTTGHLIYK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;Q53GE9;Q53G85;Q53GA1;A0A087WVQ9;B4DNE0;A0A087WV01;Q9H2I7;Q05639;A6PW80;Q5JR01;Q6NS35;Q6NSH7 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.8037 2 560.803488 1119.59242 79510.19 0.2048 0.00011485 -0.16298 -9.1399E-05 0.041821 2.3454E-05 560.803757444136 564.81048218909 29.395 1.2918 29.395 28.912 30.203 0 434 79 9 0 0 0 1.6847E-08 2 11399 122.52 87.072 1 1.5479 1.3367 0 210280000 83357000 126920000 33226 1658 12601 12949 51755;51756 51756 STTYSSLHASENR 13 0 1 Unmodified _STTYSSLHASENR_ 0 0 0 Q8IZT6;B3KWI2 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.8447 2 726.839319 1451.66409 NaN NaN NaN 0.862 0.00062653 NaN NaN NaN NaN 20.641 0.27008 20.641 20.493 20.763 0 0 0 0 0.00061931 1 7049 81.017 57.872 1 NaN NaN 0 4321900 0 4321900 33227 1902 12602 12950 51757 51757 STVAESVSQQILR 13 0 1 Unmodified _STVAESVSQQILR_ 0 0 0 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3905 2 709.385905 1416.75726 NaN NaN NaN 0.24911 0.00017671 NaN NaN NaN NaN 81.615 0.60474 81.615 81.314 81.919 0 0 0 0 0.0020397 1 48631 72.006 47.662 1 NaN NaN 0 33195000 0 33195000 33228 87 12603 12951 51758 51758 STVAESVSQQILR 13 0 1 Unmodified _STVAESVSQQILR_ 0 0 0 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.3901 2 709.385905 1416.75726 73041.58 0.52793 0.00037451 0.39544 0.00028052 0.92337 0.00065502 709.38602500844 714.390453493408 80.645 0.61662 80.645 80.249 80.866 0 212 50 6 0 0 0 2.058E-13 1 48978 129.16 129.16 1 1.1076 1.2487 0 46753000 23414000 23339000 33229 87 12603 12951 51759 51759 STVAESVSQQILR 13 0 1 Unmodified _STVAESVSQQILR_ 0 0 0 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.3857 2 709.385905 1416.75726 72086.26 0.74135 0.0005259 -0.10304 -7.3097E-05 0.63831 0.00045281 709.385792428475 714.390029128899 93.798 0.61405 93.798 93.537 94.151 7.6294E-06 202 40 7 0 0 0 1.5168E-24 2 52368 162.36 162.36 1 1.2895 1.0592 0 17389000 7489400 9899500 33230 87 12603 12951 51760;51761 51761 STVAESVSQQILR 13 0 1 Unmodified _STVAESVSQQILR_ 0 0 0 A0A024R1T1;Q86WX3 A0A024R1T1 A0A024R1T1 RPS19BP1 Active regulator of SIRT1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.3862 2 709.385905 1416.75726 71569.74 0.65942 0.00046778 0.18376 0.00013035 0.84317 0.00059813 709.386316526454 714.389938355888 93.748 0.78455 93.748 93.439 94.223 0 204 52 6 0 0 0 2.2825E-09 2 51493 122.98 122.98 1 1.562 1.2983 0 15447000 6264100 9182700 33231 87 12603 12951 51762;51763 51763 STVALTAAR 9 0 1 Unmodified _STVALTAAR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.2594 2 445.258717 888.50288 89924.58 0.38146 0.00016985 -0.15955 -7.1041E-05 0.22191 9.8807E-05 445.258551281199 450.262649182539 32.283 1.0894 32.283 31.541 32.631 3.8147E-06 540 101 8 0 0 0 1.4821E-11 3 15940 151.56 88.351 1 0.94948 1.0911 0 141580000 74652000 66928000 33232 2023;1687 12604 12952 51764;51765;51766 51766 STVALTAAR 9 0 1 Unmodified _STVALTAAR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 445.2584 2 445.258717 888.50288 88618.14 0.42901 0.00019102 -0.33781 -0.00015041 0.091205 4.061E-05 445.258455593943 450.262614963657 31.613 0.81361 31.613 30.988 31.802 -1.9073E-06 347 72 8 0 0 0 1.5491E-11 2 15548 151.04 77.775 1 0.90433 1.0481 0 297250000 163280000 133970000 33233 2023;1687 12604 12952 51767;51768 51768 STVALTAAR 9 0 1 Unmodified _STVALTAAR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 450.2628 2 445.258717 888.50288 90444.2 -0.18099 -8.0586E-05 0.022305 9.9314E-06 -0.15868 -7.0654E-05 445.258606299386 450.262713760117 36.071 0.77567 36.071 35.765 36.541 0 308 65 8 0 0 0 0.0018009 2 16046 80.684 43.842 1 1.3136 1.112 0 31290000 13186000 18104000 33234 2023;1687 12604 12952 51769;51770 51769 STVALTAAR 9 0 1 Unmodified _STVALTAAR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 450.2624 2 445.258717 888.50288 90985.64 0.099027 4.4092E-05 -0.28575 -0.00012723 -0.18672 -8.3139E-05 445.258438800149 450.262593210083 35.936 0.87983 35.936 35.679 36.559 0 356 79 8 0 0 0 9.8427E-05 2 15515 110.12 60.678 1 1.3648 1.1905 0 35497000 14601000 20896000 33235 2023;1687 12604 12952 51771;51772 51771 STVENFGQLGR 11 0 1 Unmodified _STVENFGQLGR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.311 2 604.306926 1206.5993 NaN NaN NaN -1.2462 -0.00075311 NaN NaN NaN NaN 58.408 0.88187 58.408 58.059 58.941 3.8147E-06 0 0 0 9.085E-08 1 33053 105.78 73.464 1 NaN NaN 0 5417800 0 5417800 33236 1392 12605 12953 51773 51773 STVENFGQLGR 11 0 1 Unmodified _STVENFGQLGR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.3113 2 604.306926 1206.5993 NaN NaN NaN -0.35676 -0.0002156 NaN NaN NaN NaN 57.437 0.52441 57.437 57.171 57.696 0 0 0 0 0.0020693 1 33139 78.149 56.701 1 NaN NaN 0 12538000 0 12538000 33237 1392 12605 12953 51774 51774 STVLTPMFVETQASQGTLQTR 21 0 1 Oxidation (M) _STVLTPM(ox)FVETQASQGTLQTR_ STVLTPM(1)FVETQASQGTLQTR STVLTPM(69.72)FVETQASQGTLQTR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1156.0841 2 1156.08356 2310.15256 56866.2 0.20124 0.00023265 -0.084665 -9.788E-05 0.11658 0.00013477 1156.5846201932 1162.0902454119 97.842 0.45905 97.842 97.555 98.014 0 152 37 6 0 0 0 3.9354E-08 2 59569 69.716 69.716 1 0.81541 0.84099 0 14025000 7486300 6539200 33238 1665 12606 12954 51775;51776 51776 1463 STVLTPMFVETQASQGTLQTR 21 0 1 Oxidation (M) _STVLTPM(ox)FVETQASQGTLQTR_ STVLTPM(1)FVETQASQGTLQTR STVLTPM(98.68)FVETQASQGTLQTR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1156.5844 2 1156.08356 2310.15256 57134.7 0.32599 0.00037688 0.016454 1.9022E-05 0.34245 0.0003959 1156.58542907779 1161.58946229797 98.489 0.45681 98.489 98.251 98.708 7.6294E-06 210 37 7 0 0 0 4.3686E-12 2 60151 98.676 98.676 1 0.78845 0.80142 0 27603000 14215000 13388000 33239 1665 12606 12954 51777;51778 51778 1463 STVLTPMFVETQASQGTLQTR 21 0 1 Oxidation (M) _STVLTPM(ox)FVETQASQGTLQTR_ STVLTPM(1)FVETQASQGTLQTR STVLTPM(100.11)FVETQASQGTLQTR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1156.5842 2 1156.08356 2310.15256 57308.45 0.39312 0.00045448 -0.020059 -2.319E-05 0.37307 0.00043129 1156.58515961128 1161.08803607872 97.124 0.46741 97.124 96.93 97.398 7.6294E-06 177 36 7 0 0 0 1.5458E-15 2 60546 100.11 100.11 1 0.84608 0.83853 0 15701000 7372100 8328600 33240 1665 12606 12954 51779;51780 51780 1463 STVLTPMFVETQASQGTLQTR 21 0 1 Oxidation (M) _STVLTPM(ox)FVETQASQGTLQTR_ STVLTPM(1)FVETQASQGTLQTR STVLTPM(114.64)FVETQASQGTLQTR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1156.5861 2 1156.08356 2310.15256 56824.71 -0.13936 -0.00016111 0.26901 0.000311 0.12965 0.00014988 1156.58504670622 1161.58950605034 97.833 0.47231 97.833 97.588 98.06 7.6294E-06 204 37 7 0 0 0 9.3311E-22 2 61108 114.64 114.64 1 0.81887 0.8303 0 20222000 10281000 9940600 33241 1665 12606 12954 51781;51782 51782 1463 STVLTPMFVETQASQGTLQTR 21 0 1 Oxidation (M) _STVLTPM(ox)FVETQASQGTLQTR_ STVLTPM(1)FVETQASQGTLQTR STVLTPM(76.36)FVETQASQGTLQTR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1156.5864 2 1156.08356 2310.15256 57055.64 0.19074 0.00022051 -0.18362 -0.00021228 0.0071227 8.2344E-06 1156.08387101046 1161.5894682962 110.72 0.3611 110.72 110.55 110.91 0 75 15 8 0 0 0 1.2622E-08 1 63986 76.358 76.358 1 0.28449 0.24448 0 6488400 4900600 1587800 33242 1665 12606 12954 51783 51783 1463 STVLTPMFVETQASQGTLQTR 21 0 1 Oxidation (M) _STVLTPM(ox)FVETQASQGTLQTR_ STVLTPM(1)FVETQASQGTLQTR STVLTPM(48.21)FVETQASQGTLQTR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1156.0828 2 1156.08356 2310.15256 57845.22 0.19681 0.00022753 0.3666 0.00042382 0.56341 0.00065135 1156.58504812428 1161.59028355542 111.19 0.4317 111.19 110.97 111.4 0 93 20 7 0 0 0 6.205E-06 1 63517 48.214 48.214 1 0.27412 0.22851 0 6765800 5408000 1357800 33243 1665 12606 12954 51784 51784 1463 STVLTPMFVETQASQGTLQTR 21 0 1 Unmodified _STVLTPMFVETQASQGTLQTR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1153.5925 2 1148.0861 2294.15765 58114.97 0.10536 0.00012096 0.83697 0.00096092 0.94233 0.0010819 1148.08707338463 1153.59242749192 119.92 0.40844 119.92 119.77 120.18 0 79 18 7 0 0 0 0.028999 1 71069 22.214 22.214 1 0.36965 0.31133 0 4615700 3090900 1524800 33244 1665 12606 12955 51785 51785 STVVPVPYEK 10 1 0 Unmodified _STVVPVPYEK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;X5D7Q9;A0A0A0VEB4 X5D2J9 X5D2J9 GTF2I;GTF2I-RARA General transcription factor II-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.8156 2 559.808239 1117.60193 84734.82 0.90717 0.00050784 -0.20239 -0.0001133 0.70478 0.00039454 559.808011270441 563.815198254167 65.83 0.44647 65.83 65.578 66.025 0 270 40 10 0 0 0 0.0020391 2 37984 70.908 67.414 1 0.89887 0.9684 0 37939000 19322000 18617000 33245 789 12607 12956 51786;51787 51787 STYEQVDLIGK 11 1 0 Unmodified _STYEQVDLIGK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.832 2 626.824618 1251.63468 75754.91 0.12915 8.0954E-05 0.39079 0.00024496 0.51994 0.00032591 626.824864807347 630.83203036547 69.806 0.50514 69.806 69.522 70.027 -7.6294E-06 251 44 8 0 0 0 0.00030188 1 40508 88.392 74.185 1 1.1201 1.3071 0 271510000 127040000 144470000 33246 2065 12608 12957 51788 51788 STYEQVDLIGK 11 1 0 Unmodified _STYEQVDLIGK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8326 2 626.824618 1251.63468 76452.7 0.50668 0.0003176 0.29237 0.00018326 0.79905 0.00050086 626.824724434081 630.831920642365 68.574 0.40356 68.574 68.405 68.809 0 223 35 8 0 0 0 3.8072E-05 1 40690 99.815 93.854 1 1.1601 1.3596 0 320370000 146050000 174320000 33247 2065 12608 12957 51789 51789 STYEQVDLIGK 11 1 0 Unmodified _STYEQVDLIGK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8251 2 626.824618 1251.63468 77779.12 0.41121 0.00025776 0.10934 6.8535E-05 0.52055 0.00032629 626.824543049185 630.831873396641 79.976 0.85078 79.976 79.611 80.461 0 315 55 9 0 0 0 0.0023604 2 43044 61.765 57.61 1 1.071 0.88546 0 43544000 19808000 23736000 33248 2065 12608 12957 51790;51791 51791 STYEQVDLIGK 11 1 0 Unmodified _STYEQVDLIGK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.8251 2 626.824618 1251.63468 76804.42 0.5166 0.00032381 -0.17498 -0.00010968 0.34161 0.00021413 626.824385903964 630.831663126556 80.272 1.0883 80.272 79.793 80.881 0 374 70 11 0 0 0 3.1989E-05 2 42407 100.25 96.091 1 1.0488 0.872 0 38117000 18394000 19723000 33249 2065 12608 12957 51792;51793 51793 STYEQVDLIGKK 12 2 0 Unmodified _STYEQVDLIGKK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.8863 2 690.872099 1379.72965 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.336 1 50.336 49.836 50.836 0 0 0 0 2.7278E-06 1 27778 101.82 83.65 1 33250 2065 12609 12958 51794 51794 STYEQVDLIGKK 12 2 0 Unmodified _STYEQVDLIGKK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.8854 2 690.872099 1379.72965 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.575 1 50.575 50.075 51.075 3.8147E-06 0 0 0 0.00054481 1 27921 86.898 71.269 1 33251 2065 12609 12958 51795 51795 STYEQVDLIGKK 12 2 0 Unmodified _STYEQVDLIGKK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.3888 2 690.872099 1379.72965 NaN NaN NaN 0.21357 0.00014755 NaN NaN NaN NaN 49.005 0.23172 49.005 48.823 49.055 0 0 0 0 0.037198 1 27497 45.158 35.377 1 NaN NaN 0 9670700 0 9670700 33252 2065 12609 12958 51796 51796 STYEQVDLIGKK 12 2 0 Unmodified _STYEQVDLIGKK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 698.8872 2 690.872099 1379.72965 72866.68 0.51667 0.00035696 0.27491 0.00018992 0.79158 0.00054688 690.872214371103 698.886402784782 58.27 0.44625 58.27 58.032 58.478 -3.8147E-06 214 34 8 0 0 0 0.00039576 2 29538 87.806 78.908 1 1.2106 1.032 0 21017000 9640800 11376000 33253 2065 12609 12958 51797;51798 51797 STYEQVDLIGKK 12 2 0 Unmodified _STYEQVDLIGKK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 466.2598 3 460.917158 1379.72965 87915.5 0.29772 0.00013722 -0.21699 -0.00010002 0.080726 3.7208E-05 460.916992444589 466.259791581513 58.261 0.40411 58.261 58.061 58.465 -3.8147E-06 196 31 8 0 0 0 0.020414 1 29579 20.585 19.641 1 1.2185 1.0405 0 14813000 6463500 8349500 33254 2065 12609 12958 51799 51799 STYEQVDLIGKK 12 2 0 Unmodified _STYEQVDLIGKK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.8869 2 690.872099 1379.72965 72912.23 0.44327 0.00030625 0.064645 4.4661E-05 0.50792 0.00035091 690.872115345622 698.886254257452 58.62 0.49916 58.62 58.373 58.872 0 223 36 8 0 0 0 7.3685E-19 2 29136 150.1 137.01 1 1.2999 1.1003 0 14860000 6685600 8174700 33255 2065 12609 12958 51800;51801 51800 SVAEGLSGSLVQEPFQLATEK 21 1 0 Unmodified _SVAEGLSGSLVQEPFQLATEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1096.0696 2 1095.56807 2189.12158 58917.94 0.34286 0.00037563 -0.059584 -6.5278E-05 0.28328 0.00031035 1096.06911550687 1099.57516757777 116.29 0.51279 116.29 116.05 116.56 0 244 33 10 0 0 0 4.118E-101 2 74133 203.32 203.32 1 0.78493 0.88245 0 70564000 39564000 31000000 33256 1837 12610 12959 51802;51803 51803 SVAEGLSGSLVQEPFQLATEK 21 1 0 Unmodified _SVAEGLSGSLVQEPFQLATEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1096.0702 2 1095.56807 2189.12158 58944.02 0.49715 0.00054466 -0.14655 -0.00016055 0.3506 0.00038411 1096.06929090138 1100.0764487404 115.8 0.45901 115.8 115.57 116.03 0 238 30 10 0 0 0 1.3359E-72 2 75532 186.69 186.69 1 0.73837 0.82692 0 82140000 42765000 39375000 33257 1837 12610 12959 51804;51805 51805 SVAEGLSGSLVQEPFQLATEK 21 1 0 Unmodified _SVAEGLSGSLVQEPFQLATEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1096.0665 2 1095.56807 2189.12158 58118.48 0.53159 0.00058239 -0.27542 -0.00030174 0.25617 0.00028065 1096.0688955152 1100.07634964226 128.13 0.62425 128.13 127.88 128.5 0 212 25 12 0 0 0 9.2028E-05 1 77221 38.948 38.948 1 1.2535 1.0753 0 79710000 34532000 45178000 33258 1837 12610 12959 51806 51806 SVAEGLSGSLVQEPFQLATEK 21 1 0 Unmodified _SVAEGLSGSLVQEPFQLATEK_ 0 0 0 Q643R0;Q9ULW0;B3KM90;Q96FC3 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1096.0698 2 1095.56807 2189.12158 58039.23 0.27925 0.00030594 0.031968 3.5023E-05 0.31122 0.00034096 1095.56787142018 1100.07669558691 127.97 0.69517 127.97 127.68 128.37 -7.6294E-06 219 28 11 0 0 0 4.329E-11 2 76224 93.424 93.424 1 1.3531 1.1581 0 119240000 50454000 68791000 33259 1837 12610 12959 51807;51808 51808 SVAEHPLSR 9 0 1 Unmodified _SVAEHPLSR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.7999 2 498.267073 994.519593 85827.76 -0.017498 -8.7188E-06 -0.47362 -0.00023599 -0.49112 -0.00024471 498.266503683737 503.271157522813 18.523 0.15307 18.523 18.445 18.598 0 17 4 5 0 0 0 0.0077672 1 5435 61.691 33.437 1 0.93218 0.96487 0 23197000 12061000 11136000 33260 1392 12611 12960 51809 51809 SVAHGQAPEMPLVK 14 1 0 Oxidation (M) _SVAHGQAPEM(ox)PLVK_ SVAHGQAPEM(1)PLVK SVAHGQAPEM(63.47)PLVK 0 1 0 Q1ED39;H3BMC9 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.3917 2 740.384851 1478.75515 NaN NaN NaN 0.83902 0.0006212 NaN NaN NaN NaN 27.884 0.299 27.884 27.757 28.056 0 0 0 0 0.00095468 1 13196 63.473 48.329 1 NaN NaN 0 5592500 0 5592500 33261 1775 12612 12961 51810 51810 1646 SVALYDCR 8 0 1 Unmodified _SVALYDCR_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.2384 2 492.234384 982.454216 86383.77 0.37967 0.00018688 0.41391 0.00020374 0.79358 0.00039063 492.234618319783 497.238610729378 39.249 0.55331 39.249 38.953 39.507 0 152 43 5 0 0 0 0.032472 3 20301 50.607 32.571 1 0.81689 0.83573 0 26336000 15956000 10380000 33262 339 12613 12962 51811;51812;51813 51812 SVALYDCR 8 0 1 Unmodified _SVALYDCR_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.2344 2 492.234384 982.454216 88475.34 0.075259 3.7045E-05 0.66733 0.00032848 0.74259 0.00036553 492.234740183878 497.238760075591 38.261 0.46663 38.261 38.032 38.499 0 132 37 5 0 0 0 0.0087497 2 19988 77.282 55.151 1 0.77324 0.85623 0 42339000 22478000 19860000 33263 339 12613 12962 51814;51815 51814 SVALYDCR 8 0 1 Unmodified _SVALYDCR_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.2388 2 492.234384 982.454216 86390.64 0.25831 0.00012715 0.35637 0.00017542 0.61468 0.00030257 492.234529891012 497.238588234274 44.521 0.91192 44.521 43.99 44.902 -3.8147E-06 216 64 6 0 0 0 0.013109 1 21209 66.073 43.054 1 1.2339 1.0558 0 5940100 2613900 3326200 33264 339 12613 12962 51816 51816 SVALYDCR 8 0 1 Unmodified _SVALYDCR_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.2388 2 492.234384 982.454216 86279.02 0.38833 0.00019115 0.077594 3.8194E-05 0.46592 0.00022934 492.23433742883 497.238508665639 44.661 0.88707 44.661 44.119 45.006 0 224 62 6 0 0 0 0.013109 2 20740 66.073 37.966 1 1.2443 1.1005 0 4037700 1902700 2135000 33265 339 12613 12962 51817;51818 51817 SVANVIQQAGCPVPEYIK 18 1 0 Unmodified _SVANVIQQAGCPVPEYIK_ 0 0 0 Q9Y2R4;B3KM65;A0A087X121 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 987.5132 2 987.011675 1972.0088 64077.79 0.35842 0.00035376 0.65229 0.00064382 1.0107 0.00099758 987.513662946468 991.521660199263 100.67 0.37943 100.67 100.52 100.9 0 68 25 4 0 0 0 4.153E-05 4 61842 60.628 60.628 1 0.83746 0.84903 0 6633800 3806700 2827200 33266 2126 12614 12963 51819;51820;51821;51822 51822 SVANVIQQAGCPVPEYIK 18 1 0 Unmodified _SVANVIQQAGCPVPEYIK_ 0 0 0 Q9Y2R4;B3KM65;A0A087X121 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 987.0123 2 987.011675 1972.0088 62699.89 0.40621 0.00040093 0.025209 2.4882E-05 0.43142 0.00042582 987.01186593386 991.01839473187 100.04 0.3007 100.04 99.885 100.19 0 74 23 4 0 0 0 3.3994E-05 4 62747 63.76 63.76 1 0.97874 0.98909 0 8590100 3995200 4594900 33267 2126 12614 12963 51823;51824;51825;51826 51826 SVANVIQQAGCPVPEYIK 18 1 0 Unmodified _SVANVIQQAGCPVPEYIK_ 0 0 0 Q9Y2R4;B3KM65;A0A087X121 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 987.0125 2 987.011675 1972.0088 61386.84 0.59579 0.00058805 0.32231 0.00031812 0.91809 0.00090617 987.011211050279 991.018762133089 113.21 0.34927 113.21 113.02 113.37 0 94 17 7 0 0 0 0.00084967 1 65848 40.066 40.066 1 1.0531 0.84398 0 8373700 3674400 4699200 33268 2126 12614 12963 51827 51827 SVANVIQQAGCPVPEYIK 18 1 0 Unmodified _SVANVIQQAGCPVPEYIK_ 0 0 0 Q9Y2R4;B3KM65;A0A087X121 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 991.5255 2 987.011675 1972.0088 61819.04 0.28079 0.00027714 0.5287 0.00052184 0.80949 0.00079898 987.513866294019 991.521258933741 113.11 0.39069 113.11 112.89 113.28 -7.6294E-06 98 19 7 0 0 0 0.00059584 2 64852 43.184 43.184 1 1.0605 0.86322 0 7248300 3603200 3645100 33269 2126 12614 12963 51828;51829 51828 SVASDVPEELDFLVPK 16 1 0 Unmodified _SVASDVPEELDFLVPK_ 0 0 0 Q14966;A0A096LPK8;Q57Z90;A0A096LNS4 Q14966 Q14966 ZNF638;NP220 Zinc finger protein 638 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.9602 2 872.953817 1743.89308 66684.35 0.69391 0.00060575 0.14834 0.0001295 0.84225 0.00073525 873.455232517289 876.960733565171 124.49 0.41083 124.49 124.22 124.64 0 113 27 6 0 0 0 0.00015519 2 80822 72.006 72.006 1 0.97774 1.0076 0 10860000 5390400 5469100 33270 1746 12615 12964 51830;51831 51830 SVASDVPEELDFLVPK 16 1 0 Unmodified _SVASDVPEELDFLVPK_ 0 0 0 Q14966;A0A096LPK8;Q57Z90;A0A096LNS4 Q14966 Q14966 ZNF638;NP220 Zinc finger protein 638 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.4612 2 872.953817 1743.89308 65971.2 0.80201 0.00070012 0.22639 0.00019763 1.0284 0.00089775 872.95473502355 877.462136125765 124.04 0.48866 124.04 123.82 124.3 0 99 33 4 0 0 0 0.010479 1 82527 33.409 33.409 1 0.90431 0.90327 0 6583300 3050000 3533200 33271 1746 12615 12964 51832 51832 SVDFHFR 7 0 1 Unmodified _SVDFHFR_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.2248 2 454.224677 906.434801 90037.67 0.32279 0.00014662 -0.1315 -5.9733E-05 0.19129 8.6888E-05 454.22456928507 459.228716792414 49.264 0.55675 49.264 48.978 49.535 0 157 38 5 0 0 0 0.026656 2 26966 75.311 58.384 1 0.64895 0.72026 0 69257000 40659000 28598000 33272 1837 12616 12965 51833;51834 51834 SVDFHFR 7 0 1 Unmodified _SVDFHFR_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 454.2247 2 454.224677 906.434801 90212.48 0.2516 0.00011428 -0.061156 -2.7778E-05 0.19044 8.6503E-05 454.224653767489 459.228643822944 55.769 1.0641 55.769 55.481 56.545 0 276 66 7 0 0 0 0.028931 1 28013 71.141 56.728 1 1.2413 1.0183 0 12333000 5167500 7165300 33273 1837 12616 12965 51835 51835 SVDVILDDDLVDK 13 1 0 Unmodified _SVDVILDDDLVDK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.3801 2 723.372129 1444.7297 70418.16 0.96196 0.00069586 0.79194 0.00057287 1.7539 0.0012687 723.874518891171 727.379532876302 114.69 0.63036 114.69 114.37 115 -7.6294E-06 112 28 6 0 0 0 0.0024841 1 67080 53.569 53.569 1 0.96789 0.76699 0 4212200 1629300 2582900 33274 568 12617 12966 51836 51836 SVEDRFDQQK 10 1 1 Unmodified _SVEDRFDQQK_ 0 0 1 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.3027 2 626.301841 1250.58913 76959.13 0.66291 0.00041518 -0.17811 -0.00011155 0.4848 0.00030363 626.301918811097 635.312413512783 21.73 0.48572 21.73 21.389 21.875 0 74 28 4 0 0 0 0.0034376 1 7868 83.647 57.542 1 0.73375 0.78988 0 11412000 5706400 5706000 33275 1486 12618 12967 51837 51837 SVEEEEQVWR 10 0 1 Unmodified _SVEEEEQVWR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5;B3KSG1;A0A087WU26 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.8068 2 645.801674 1289.58879 79906.91 0.569 0.00036746 2.1178 0.0013677 2.6868 0.0017351 645.802733543393 650.807215842722 52.578 0.18364 52.578 52.464 52.647 0 34 12 4 0 0 0 0.0029629 1 29269 66.692 46.905 1 1.0683 1.1504 0 3134500 1813300 1321100 33276 471 12619 12968 51838 51838 SVEELLEAELLK 12 1 0 Unmodified _SVEELLEAELLK_ 0 0 0 A0A024R663;Q86UP2;G3V4Y7;H0YJZ8;G3V5G2 A0A024R663 A0A024R663 KTN1 Kinectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.8822 2 686.882133 1371.74971 75290.23 0.64132 0.00044051 0.034953 2.4009E-05 0.67628 0.00046452 686.882187232318 690.88938421137 134.51 0.24991 134.51 134.41 134.66 0 17 7 5 0 0 0 0.047262 1 81305 33.088 33.088 1 0.49784 0.40778 0 5409400 3172000 2237300 33277 197 12620 12969 51839 51839 SVEEVASEIQPFLR 14 0 1 Unmodified _SVEEVASEIQPFLR_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.424 2 802.419945 1602.82534 70465.56 0.76357 0.0006127 0.69766 0.00055982 1.4612 0.0011725 802.420987231428 807.423558932163 114.49 0.32625 114.49 114.33 114.66 0 66 23 5 0 0 0 5.9082E-05 1 72673 91.701 83.604 1 0.67029 0.69261 0 6140200 3574200 2566000 33278 1486 12621 12970 51840 51840 SVEEVASEIQPFLR 14 0 1 Unmodified _SVEEVASEIQPFLR_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.4224 2 802.419945 1602.82534 NaN NaN NaN 1.0422 0.00083628 NaN NaN NaN NaN 113.92 0.2619 113.92 113.85 114.11 0 0 0 0 5.8896E-05 1 74045 90.913 74 1 NaN NaN 0 3445100 3445100 0 33279 1486 12621 12970 51841 51841 SVEGLQEGSVLR 12 0 1 Unmodified _SVEGLQEGSVLR_ 0 0 0 I3L2B0;K7EIG1;O75153;I3L318 I3L2B0 I3L2B0 CLUH Clustered mitochondria protein homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3431 2 637.340966 1272.66738 NaN NaN NaN -2.0058 -0.0012784 NaN NaN NaN NaN 63.612 0.26568 63.612 63.508 63.774 -3.8147E-06 0 0 0 0.0019311 1 37385 72.434 52.105 1 NaN NaN 0 4728900 0 4728900 33280 1321 12622 12971 51842 51842 SVELEEALPVTTAEGMAK 18 1 0 Oxidation (M) _SVELEEALPVTTAEGM(ox)AK_ SVELEEALPVTTAEGM(1)AK SVELEEALPVTTAEGM(70.62)AK 0 1 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.4731 2 945.971881 1889.92921 62502.78 0.63434 0.00060007 -0.28283 -0.00026755 0.35151 0.00033252 945.971983309579 949.978932899023 93.489 0.58694 93.489 93.192 93.779 0 272 50 8 0 0 0 1.1315E-05 3 56817 70.622 70.622 1 0.96203 0.96824 0 27112000 13246000 13866000 33281 1946 12623 12972 51843;51844;51845 51845 1795 SVELEEALPVTTAEGMAK 18 1 0 Oxidation (M) _SVELEEALPVTTAEGM(ox)AK_ SVELEEALPVTTAEGM(1)AK SVELEEALPVTTAEGM(150.21)AK 0 1 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 945.9755 2 945.971881 1889.92921 63260.79 0.60873 0.00057585 -0.27346 -0.00025869 0.33527 0.00031716 945.972043225396 949.979071051287 92.838 0.5627 92.838 92.522 93.085 0 189 45 7 0 0 0 1.4695E-31 2 57454 150.21 150.21 1 0.95482 0.96076 0 27604000 13313000 14291000 33282 1946 12623 12972 51846;51847 51847 1795 SVELEEALPVTTAEGMAK 18 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)SVELEEALPVTTAEGM(ox)AK_ SVELEEALPVTTAEGM(1)AK SVELEEALPVTTAEGM(112.44)AK 1 1 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 967.4791 2 966.977164 1931.93977 59154.5 0.53497 0.00051731 -0.77322 -0.00074769 -0.23825 -0.00023038 967.47850581432 970.983332359493 118.07 0.56786 118.07 117.82 118.39 -7.6294E-06 244 37 8 0 0 0 2.0893E-13 2 77699 112.44 97.236 1 1.1868 1.33 0 80390000 38483000 41907000 33283 1946 12623 12973 51848;51849 51849 1795 SVELEEALPVTTAEGMAK 18 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)SVELEEALPVTTAEGM(ox)AK_ SVELEEALPVTTAEGM(1)AK SVELEEALPVTTAEGM(79.47)AK 1 1 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 967.479 2 966.977164 1931.93977 57843.61 0.036135 3.4942E-05 -0.1984 -0.00019185 -0.16226 -0.0001569 967.47874616601 971.486134016226 130.67 0.74348 130.67 130.39 131.13 0 222 34 9 0 0 0 6.8337E-06 2 79149 79.466 73.624 1 0.58369 0.45216 0 13284000 7986500 5297500 33284 1946 12623 12973 51850;51851 51851 1795 SVEPQDAGPLER 12 0 1 Unmodified _SVEPQDAGPLER_ 0 0 0 Q6PK21;A0A0A0MRN5;Q05BV5;Q9NZT2;B3KMQ6;V9H0E3 Q6PK21 Q6PK21 OGFR Opioid growth factor receptor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.3273 2 649.322773 1296.63099 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.382 1 42.382 41.882 42.882 0 0 0 0 0.0010671 1 22522 72.434 56.772 1 33285 469 12624 12974 51852 51852 SVEPQDAGPLER 12 0 1 Unmodified _SVEPQDAGPLER_ 0 0 0 Q6PK21;A0A0A0MRN5;Q05BV5;Q9NZT2;B3KMQ6;V9H0E3 Q6PK21 Q6PK21 OGFR Opioid growth factor receptor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.3261 2 649.322773 1296.63099 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.459 1 42.459 41.959 42.959 0 0 0 0 0.0057556 1 22583 63.073 47.184 1 33286 469 12624 12974 51853 51853 SVEPQDAGPLER 12 0 1 Unmodified _SVEPQDAGPLER_ 0 0 0 Q6PK21;A0A0A0MRN5;Q05BV5;Q9NZT2;B3KMQ6;V9H0E3 Q6PK21 Q6PK21 OGFR Opioid growth factor receptor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.9896 2 649.322773 1296.63099 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.7 1 41.7 41.2 42.2 0 0 0 0 0.0057556 1 22429 63.073 50.485 1 33287 469 12624 12974 51854 51854 SVEPQDAGPLER 12 0 1 Unmodified _SVEPQDAGPLER_ 0 0 0 Q6PK21;A0A0A0MRN5;Q05BV5;Q9NZT2;B3KMQ6;V9H0E3 Q6PK21 Q6PK21 OGFR Opioid growth factor receptor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.3268 2 649.322773 1296.63099 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.857 1 41.857 41.357 42.357 0 0 0 0 0.00022107 1 22531 84.17 63.841 1 33288 469 12624 12974 51855 51855 SVFALTNGIYPHK 13 1 0 Unmodified _SVFALTNGIYPHK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8914 2 723.890626 1445.7667 NaN NaN NaN 0.53981 0.00039076 NaN NaN NaN NaN 87.667 0.88703 87.667 87.251 88.138 7.6294E-06 0 0 0 1.3228E-05 2 52725 96.009 82.207 1 NaN NaN 0 44269000 44269000 0 33289 342 12625 12975 51856;51857 51856 SVFALTNGIYPHK 13 1 0 Unmodified _SVFALTNGIYPHK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.8913 2 723.890626 1445.7667 72317.65 0.40844 0.00029567 0.20484 0.00014828 0.61328 0.00044395 723.890913404366 727.897552764747 86.212 0.89494 86.212 85.739 86.634 0 372 75 8 0 0 0 2.2729E-06 3 53053 123.86 123.86 1 0.97627 1.0916 0 106830000 51624000 55208000 33290 342 12625 12975 51858;51859;51860 51860 SVFALTNGIYPHK 13 1 0 Unmodified _SVFALTNGIYPHK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.8898 2 723.890626 1445.7667 72631.69 0.68864 0.0004985 -0.35571 -0.00025749 0.33293 0.000241 723.890199919305 727.897526587145 99.614 0.77296 99.614 99.244 100.02 0 237 49 7 0 0 0 0.00016051 3 56300 87.066 87.066 1 0.84284 0.65495 0 15154000 7653200 7500600 33291 342 12625 12975 51861;51862;51863 51862 SVFALTNGIYPHK 13 1 0 Unmodified _SVFALTNGIYPHK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.6009 3 482.92951 1445.7667 86725.31 0.1963 9.48E-05 -1.219 -0.00058869 -1.0227 -0.00049389 482.928545548339 485.60017474793 99.659 0.57651 99.659 99.257 99.834 -7.6294E-06 214 35 9 0 0 0 0.057493 1 56348 17.201 17.201 1 0.97145 0.75513 0 15353000 7436900 7916300 33292 342 12625 12975 51864 51864 SVFALTNGIYPHK 13 1 0 Unmodified _SVFALTNGIYPHK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.6008 3 482.92951 1445.7667 85929.62 0.28548 0.00013786 -0.52954 -0.00025573 -0.24406 -0.00011787 482.929101424382 485.600618340394 99.284 0.53771 99.284 99.004 99.542 7.6294E-06 215 33 8 0 0 0 0.010865 1 55180 32.439 32.439 1 0.88796 0.72935 0 12316000 6143800 6172600 33293 342 12625 12975 51865 51865 SVFALTNGIYPHK 13 1 0 Unmodified _SVFALTNGIYPHK_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.8904 2 723.890626 1445.7667 72544.39 0.62837 0.00045487 -0.53407 -0.00038661 0.094304 6.8266E-05 723.89002765261 727.897489218106 99.248 0.79405 99.248 98.968 99.763 7.6294E-06 265 56 8 0 0 0 0.00013242 3 55346 87.298 87.298 1 0.89722 0.72084 0 15986000 7890600 8095900 33294 342 12625 12975 51866;51867;51868 51867 SVFDEELTNTSK 12 1 0 Unmodified _SVFDEELTNTSK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.3289 2 685.327721 1368.64089 73212.44 0.65524 0.00044905 0.057363 3.9312E-05 0.7126 0.00048837 685.327639111488 689.334760634235 68.155 0.90936 68.155 67.735 68.644 0 462 79 8 0 0 0 3.5524E-05 1 39310 99.568 91.094 1 0.81749 0.92071 0 123700000 72017000 51685000 33295 899;1099 12626 12976 51869 51869 SVFDEELTNTSK 12 1 0 Unmodified _SVFDEELTNTSK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.3278 2 685.327721 1368.64089 73605.8 0.43779 0.00030003 0.20847 0.00014287 0.64626 0.0004429 685.327716270366 689.334778788441 67.071 0.81493 67.071 66.681 67.496 0 384 68 8 0 0 0 1.4996E-12 1 39573 128.03 119.71 1 0.82309 0.93627 0 146040000 81115000 64929000 33296 899;1099 12626 12976 51870 51870 SVFDEELTNTSK 12 1 0 Unmodified _SVFDEELTNTSK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.3279 2 685.327721 1368.64089 73449.18 0.44128 0.00030242 0.15659 0.00010731 0.59787 0.00040974 685.327694746666 689.334894498574 77.723 0.88981 77.723 77.348 78.238 -7.6294E-06 345 58 9 0 0 0 0.001117 2 41526 61.958 61.958 1 1.1033 0.89705 0 29359000 13678000 15681000 33297 899;1099 12626 12976 51871;51872 51872 SVFDEELTNTSK 12 1 0 Unmodified _SVFDEELTNTSK_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3356 2 685.327721 1368.64089 73362.04 0.6063 0.00041552 0.12574 8.6171E-05 0.73204 0.00050169 685.327580351028 689.334901756685 78.125 0.84577 78.125 77.808 78.653 7.6294E-06 347 54 10 0 0 0 0.00035606 2 40920 72.2 65.269 1 1.0677 0.87135 0 26076000 12635000 13441000 33298 899;1099 12626 12976 51873;51874 51873 SVFDEELTNTSKK 13 2 0 Unmodified _SVFDEELTNTSKK_ 0 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.8912 2 749.375203 1496.73585 71020.59 0.64325 0.00048204 -0.23705 -0.00017764 0.4062 0.0003044 749.375034794781 757.38928239835 58.6 0.51105 58.6 58.286 58.797 -3.8147E-06 150 37 7 0 0 0 0.050033 1 29695 45.653 39.12 1 1.2015 1.0353 0 5736700 2775900 2960800 33299 899;1099 12627 12977 51875 51875 SVFDEELTNTSKK 13 2 0 Unmodified _SVFDEELTNTSKK_ 0 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 749.8553 2 749.375203 1496.73585 71261.06 0.4694 0.00035175 -0.093773 -7.0271E-05 0.37562 0.00028148 749.374957254721 757.389475284029 59.007 0.3761 59.007 58.805 59.181 -3.8147E-06 148 29 6 0 0 0 0.047915 1 29336 33.89 30.003 1 1.1173 0.95318 0 4971400 2381500 2589900 33300 899;1099 12627 12977 51876 51876 SVFDIPIFTEEFLNHSK 17 1 0 Unmodified _SVFDIPIFTEEFLNHSK_ 0 0 0 B4DMG1;Q9NP66 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.0105 3 675.010557 2022.00984 75404.32 0.87461 0.00059037 0.028987 1.9566E-05 0.90359 0.00060993 675.344917121092 677.681939724888 132.74 0.87971 132.74 132.19 133.07 0 189 51 5 0 0 0 0.02004 1 86520 14.695 11.201 1 0.80608 0.81624 0 6735800 4529500 2206300 33301 1005 12628 12978 51877 51877 SVFDIPIFTEEFLNHSK 17 1 0 Unmodified _SVFDIPIFTEEFLNHSK_ 0 0 0 B4DMG1;Q9NP66 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.6822 3 675.010557 2022.00984 75345.91 0.86509 0.00058394 -0.10045 -6.7805E-05 0.76464 0.00051614 675.010422056169 678.016268351006 132.1 0.9994 132.1 131.63 132.62 0 325 63 7 0 0 0 0.041586 1 88204 16.306 11.689 1 0.79065 0.79821 0 8179500 4058900 4120600 33302 1005 12628 12978 51878 51878 SVFDIPIFTEEFLNHSK 17 1 0 Unmodified _SVFDIPIFTEEFLNHSK_ 0 0 0 B4DMG1;Q9NP66 B4DMG1 B4DMG1 HMG20A High mobility group protein 20A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.0112 3 675.010557 2022.00984 NaN NaN NaN -0.25007 -0.0001688 NaN NaN NaN NaN 131.69 0.20837 131.69 131.54 131.74 0 0 0 0 0.023641 1 88126 32.341 28.9 1 NaN NaN 0 2662200 2662200 0 33303 1005 12628 12978 51879 51879 SVFEEEVR 8 0 1 Unmodified _SVFEEEVR_ 0 0 0 Q03252 Q03252 Q03252 LMNB2 Lamin-B2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.7452 2 497.745639 993.476725 NaN NaN NaN -0.52298 -0.00026031 NaN NaN NaN NaN 46.103 0.73521 46.103 45.789 46.524 0 0 0 0 0.036094 1 25387 55.531 36.8 1 NaN NaN 0 14794000 14794000 0 33304 1682 12629 12979 51880 51880 SVFGHICSHLTPR 13 0 1 Unmodified _SVFGHICSHLTPR_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.5937 3 504.257632 1509.75107 85147.81 0.51104 0.0002577 -0.19016 -9.5891E-05 0.32088 0.00016181 504.25747541571 507.593517011523 65.44 0.4256 65.44 65.285 65.711 0 125 31 6 0 0 0 0.023441 1 33806 24.084 24.084 1 1.0246 0.85717 0 3201500 1509000 1692500 33305 1997 12630 12980 51881 51881 SVFINNVLSK 10 1 0 Unmodified _SVFINNVLSK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8287 2 560.821681 1119.62881 80983.33 0.75772 0.00042495 -0.90622 -0.00050823 -0.1485 -8.328E-05 560.82148823768 564.828624590959 84.945 0.56602 84.945 84.659 85.225 0 261 46 9 0 0 0 0.00060252 2 50850 84.213 72.444 1 1.5556 1.7544 0 77216000 29262000 47954000 33306 1945 12631 12981 51882;51883 51882 SVFINNVLSK 10 1 0 Unmodified _SVFINNVLSK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8293 2 560.821681 1119.62881 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.76 1 83.76 83.26 84.26 0 0 0 0 6.3276E-05 1 51370 84.213 57.61 1 33307 1945 12631 12981 51884 51884 SVFINNVLSK 10 1 0 Unmodified _SVFINNVLSK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.8287 2 560.821681 1119.62881 79692.7 0.88054 0.00049383 -0.8452 -0.00047401 0.035338 1.9818E-05 560.821441296543 564.828528517128 97.14 0.75838 97.14 96.734 97.493 0 193 37 8 0 0 0 0.055405 1 54424 35.541 29.237 1 3.1234 2.4616 0 17652000 4162100 13490000 33308 1945 12631 12981 51885 51885 SVFINNVLSK 10 1 0 Unmodified _SVFINNVLSK_ 0 0 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.8288 2 560.821681 1119.62881 80878.2 0.40313 0.00022609 -0.4353 -0.00024413 -0.03217 -1.8041E-05 560.821631591203 564.828760092646 96.919 0.72556 96.919 96.539 97.265 0 193 35 9 0 0 0 0.0033685 2 53514 64.841 56.422 1 3.049 2.4496 0 15910000 3857700 12052000 33309 1945 12631 12981 51886;51887 51886 SVFVGNLPYK 10 1 0 Unmodified _SVFVGNLPYK_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.3112 2 562.310949 1122.60735 81996.66 0.72524 0.00040781 0.49694 0.00027943 1.2222 0.00068724 562.311250696284 566.318166336308 95.012 0.46265 95.012 94.846 95.308 0 134 33 6 0 0 0 0.014352 2 53265 49.097 44.156 1 0.97916 0.77604 0 4783900 2242000 2541900 33310 1566 12632 12982 51888;51889 51888 SVGDESWEQTQEGDVGALYHEQLALK 26 1 0 Unmodified _SVGDESWEQTQEGDVGALYHEQLALK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 963.7893 3 963.789425 2888.34645 61294.33 0.37953 0.00036579 0.070864 6.8298E-05 0.4504 0.00043409 964.457292577238 966.794563302857 101.76 0.46536 101.76 101.5 101.97 -7.6294E-06 150 36 7 0 0 0 9.0175E-10 3 62586 54.728 52.671 1 0.8435 0.87777 0 11561000 4628200 6932500 33311 1412 12633 12983 51890;51891;51892 51890 SVGDESWEQTQEGDVGALYHEQLALK 26 1 0 Unmodified _SVGDESWEQTQEGDVGALYHEQLALK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 963.7898 3 963.789425 2888.34645 62383 0.41684 0.00040174 -0.16253 -0.00015665 0.2543 0.00024509 964.457138226449 966.795143613921 101.07 0.49509 101.07 100.85 101.34 7.6294E-06 142 37 7 0 0 0 0.025028 1 63666 16.829 16.829 1 0.90824 0.90662 0 14643000 6558600 8084600 33312 1412 12633 12983 51893 51893 SVGDESWEQTQEGDVGALYHEQLALK 26 1 0 Unmodified _SVGDESWEQTQEGDVGALYHEQLALK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 964.1255 3 963.789425 2888.34645 61575.73 0.53587 0.00051647 0.02882 2.7776E-05 0.56469 0.00054424 964.123711906855 966.795121749788 113.6 0.51452 113.6 113.44 113.96 0 145 23 10 0 0 0 2.6464E-06 1 66207 41.423 41.423 1 1.4698 1.1706 0 6742700 2975700 3767000 33313 1412 12633 12983 51894 51894 SVGDESWEQTQEGDVGALYHEQLALK 26 1 0 Unmodified _SVGDESWEQTQEGDVGALYHEQLALK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 963.7891 3 963.789425 2888.34645 62015.48 0.19607 0.00018897 0.1294 0.00012471 0.32546 0.00031368 964.123938121381 966.795229265509 113.56 0.5143 113.56 113.31 113.83 -7.6294E-06 152 24 10 0 0 0 0.00036246 1 65261 32.038 32.038 1 1.4359 1.1772 0 8808000 2656200 6151800 33314 1412 12633 12983 51895 51895 SVGDGETVEFDVVEGEK 17 1 0 Unmodified _SVGDGETVEFDVVEGEK_ 0 0 0 P67809;Q6PKI6;Q7KZ24;H0Y449;A0A0D9SEI8;Q59EB5;B2RCC2;Q9Y2T7;Q59HE1;A0A024RAV4;A0A024RAQ1;P16989 P67809;A0A024RAV4 P67809 YBX1;YBX3;YBX2;CSDA Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 902.4223 2 898.415253 1794.81595 64483.53 0.78225 0.00070279 -0.44201 -0.00039711 0.34024 0.00030568 898.415113488505 902.421238434997 87.032 0.84726 87.032 86.669 87.516 0 307 69 7 0 0 0 4.3384E-09 3 52409 106.32 106.32 1 2.4526 2.6662 0 47487000 9962000 37525000 33315 1657;310 12634 12984 51896;51897;51898 51896 SVGDGETVEFDVVEGEK 17 1 0 Unmodified _SVGDGETVEFDVVEGEK_ 0 0 0 P67809;Q6PKI6;Q7KZ24;H0Y449;A0A0D9SEI8;Q59EB5;B2RCC2;Q9Y2T7;Q59HE1;A0A024RAV4;A0A024RAQ1;P16989 P67809;A0A024RAV4 P67809 YBX1;YBX3;YBX2;CSDA Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.4221 2 898.415253 1794.81595 64838.58 0.41773 0.00037529 -0.36249 -0.00032566 0.055238 4.9627E-05 898.41513241984 902.421467263997 86.484 0.73026 86.484 86.067 86.798 0 265 65 6 0 0 0 2.8564E-09 3 53145 107.65 103.13 1 2.3659 2.6631 0 56909000 16067000 40842000 33316 1657;310 12634 12984 51899;51900;51901 51899 SVGDNSSDLSNVAVIDGNR 19 0 1 Unmodified _SVGDNSSDLSNVAVIDGNR_ 0 0 0 Q8N516;Q4LE38;O95163;F5H2T0;B3KXE7;B4E3I9 Q8N516 Q8N516 IKBKAP;IKBKAP variant protein Elongator complex protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.9587 2 959.958682 1917.90281 62772.01 0.6725 0.00064557 0.41597 0.00039932 1.0885 0.0010449 960.461140514406 964.962956208727 77.488 0.44566 77.488 77.284 77.729 0 103 36 5 0 0 0 2.5353E-05 1 46866 58.831 53.225 1 1.3761 1.3584 0 12809000 6059300 6749500 33317 1419 12635 12985 51902 51902 SVGELPSTVESLQK 14 1 0 Unmodified _SVGELPSTVESLQK_ 0 0 0 B3KVX6;Q8TB01;Q6NWZ1;A0A024RBH2;Q07065 B3KVX6 B3KVX6 CKAP4 Cytoskeleton-associated protein 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.3673 2 737.393396 1472.77224 77636.11 0.40569 0.00029915 -1.4962 -0.0011033 -1.0905 -0.00080415 737.3928032075 741.900014755619 78.376 0.34245 78.376 78.228 78.571 0 75 29 6 0 0 0 0.021622 1 47521 52.6 52.6 1 0.65893 0.66551 0 8365900 4214600 4151200 33318 338 12636 12986 51903 51903 SVGGSGGGSFGDNLVTR 17 0 1 Unmodified _SVGGSGGGSFGDNLVTR_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.8837 2 783.878975 1565.7434 68787.52 0.60462 0.00047395 0.048876 3.8313E-05 0.65349 0.00051226 783.878972416506 788.883161037004 63.543 1.0163 63.543 63.157 64.173 -3.8147E-06 629 97 9 0 0 0 1.9854E-08 4 36739 99.941 99.941 1 1.427 1.6396 0 141340000 59287000 82051000 33319 1440 12637 12987 51904;51905;51906;51907 51906 SVGGSGGGSFGDNLVTR 17 0 1 Unmodified _SVGGSGGGSFGDNLVTR_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.8804 2 783.878975 1565.7434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.178 1 64.178 63.678 64.678 0 0 0 0 0.0084319 1 36859 46.069 37.111 1 33320 1440 12637 12987 51908 51908 SVGGSGGGSFGDNLVTR 17 0 1 Unmodified _SVGGSGGGSFGDNLVTR_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.8806 2 783.878975 1565.7434 68840.17 0.58551 0.00045897 0.044974 3.5254E-05 0.63048 0.00049422 783.878960073725 788.883183140746 62.532 1.1246 62.532 62.071 63.196 0 645 102 10 0 0 0 3.7023E-07 4 36931 96.734 96.734 1 1.3887 1.5983 0 212320000 88596000 123730000 33321 1440 12637 12987 51909;51910;51911;51912 51911 SVGGSGGGSFGDNLVTR 17 0 1 Unmodified _SVGGSGGGSFGDNLVTR_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 788.8838 2 783.878975 1565.7434 67959.61 0.64124 0.00050265 -0.039063 -3.0621E-05 0.60218 0.00047203 783.878924544053 788.883089660526 73.437 1.0409 73.437 72.996 74.037 7.6294E-06 482 74 10 0 0 0 0.00010413 2 38678 59.607 59.607 1 1.3789 1.1719 0 34199000 14425000 19774000 33322 1440 12637 12987 51913;51914 51913 SVGGSGGGSFGDNLVTR 17 0 1 Unmodified _SVGGSGGGSFGDNLVTR_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.3796 2 783.878975 1565.7434 68593.82 0.5689 0.00044594 -0.045954 -3.6022E-05 0.52294 0.00040992 783.879035588988 788.883108643742 73.934 1.0229 73.934 73.569 74.592 0 451 70 10 0 0 0 0.0010161 2 38213 43.813 43.813 1 1.4634 1.2765 0 30229000 11820000 18409000 33323 1440 12637 12987 51915;51916 51916 SVGQGYSVGQSMR 13 0 1 Oxidation (M) _SVGQGYSVGQSM(ox)R_ SVGQGYSVGQSM(1)R SVGQGYSVGQSM(83.23)R 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3267 2 686.319708 1370.62486 73718.25 0.84202 0.00057789 0.43186 0.00029639 1.2739 0.00087429 686.320192783217 691.324257465105 26.107 0.42773 26.107 25.84 26.268 0 112 23 6 0 0 0 7.0329E-05 2 11544 83.226 73.793 1 0.88824 0.93043 0 12534000 5871300 6663100 33324 878 12638 12988 51917;51918 51917 691 SVGQGYSVGQSMR 13 0 1 Oxidation (M) _SVGQGYSVGQSM(ox)R_ SVGQGYSVGQSM(1)R SVGQGYSVGQSM(76.33)R 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3202 2 686.319708 1370.62486 73311.41 0.55676 0.00038212 0.046729 3.2071E-05 0.60349 0.00041419 686.31988196468 691.323866334528 25.833 0.37951 25.833 25.589 25.968 0 126 26 6 0 0 0 5.697E-05 2 11302 85.813 79.153 1 0.99238 1.0014 0 19663000 8676600 10986000 33325 878 12638 12988 51919;51920 51919 691 SVGRPPGPYTR 11 0 2 Unmodified _SVGRPPGPYTR_ 0 0 1 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 402.888 3 396.215761 1185.62546 95982.02 -0.11019 -4.3658E-05 0.32035 0.00012693 0.21016 8.3269E-05 396.2159386186 402.888165432152 22.592 0.47473 22.592 22.311 22.786 0 122 30 6 0 0 0 0.010373 1 8657 36.284 32.611 1 1.1002 1.1916 0 23906000 10413000 13493000 33326 2143 12639 12989 51921 51921 SVGRPPGPYTR 11 0 2 Unmodified _SVGRPPGPYTR_ 0 0 1 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 396.2157 3 396.215761 1185.62546 93792.75 0.18083 7.1649E-05 -0.2494 -9.8817E-05 -0.068569 -2.7168E-05 396.215561737049 402.887803023566 22.171 0.41472 22.171 22.021 22.436 1.9073E-06 89 19 6 0 0 0 0.0040514 1 8228 47.712 37.404 1 1.271 1.4398 0 31901000 13941000 17960000 33327 2143 12639 12989 51922 51922 SVGVISPYR 9 0 1 Unmodified _SVGVISPYR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.2739 2 489.274367 976.53418 89715 0.25212 0.00012336 -0.41659 -0.00020383 -0.16447 -8.0471E-05 489.274014281938 494.278356440387 53.371 0.52795 53.371 52.915 53.443 3.8147E-06 77 42 4 0 0 0 0.016543 2 29811 53.775 36.41 1 1.179 1.1898 0 15547000 7450000 8097200 33328 1102 12640 12990 51923;51924 51924 SVGVISPYR 9 0 1 Unmodified _SVGVISPYR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.2779 2 489.274367 976.53418 88538.19 0.23295 0.00011398 -0.16196 -7.9241E-05 0.070996 3.4737E-05 489.274213693492 494.278228897229 51.891 0.54392 51.891 51.599 52.143 -3.8147E-06 129 43 4 0 0 0 0.0063471 1 29561 64.42 38.861 1 1.5311 1.5154 0 12338000 4957300 7381200 33329 1102 12640 12990 51925 51925 SVHFQDSLDLILSADSR 17 0 1 Unmodified _SVHFQDSLDLILSADSR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.9908 3 634.990045 1901.94831 76884.72 0.787 0.00049974 0.053358 3.3882E-05 0.84036 0.00053362 634.99008582492 638.326042177737 123.55 0.73512 123.55 123.21 123.94 7.6294E-06 146 30 8 0 0 0 0.00045702 2 73888 40.515 11.272 1 1.4335 1.2339 0 7253100 2914400 4338800 33330 2000 12641 12991 51926;51927 51927 SVHFQDSLDLILSADSR 17 0 1 Unmodified _SVHFQDSLDLILSADSR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.3264 3 634.990045 1901.94831 77227.06 0.85916 0.00054556 -0.044484 -2.8247E-05 0.81468 0.00051731 634.989997636454 638.325788715215 123.27 0.52625 123.27 123.05 123.57 0 120 22 8 0 0 0 0.0034712 2 72719 33.836 18.907 1 1.3801 1.1474 0 7528500 2803300 4725200 33331 2000 12641 12991 51928;51929 51928 SVHYCPATK 9 1 0 Unmodified _SVHYCPATK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.763 2 531.755484 1061.49641 NaN NaN NaN 0.097078 5.1622E-05 NaN NaN NaN NaN 17.523 0.3763 17.523 17.307 17.683 0 0 0 0 1.0938E-33 1 4657 170.3 135.49 1 NaN NaN 0 6429500 0 6429500 33332 568 12642 12992 51930 51930 SVIEQGGIQTVDQLIK 16 1 0 Unmodified _SVIEQGGIQTVDQLIK_ 0 0 0 B7Z5C1;B4DHD2;Q4W4Y1;Q8WUM4 B7Z5C1 B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.489 2 864.480534 1726.94651 NaN NaN NaN 0.18389 0.00015897 NaN NaN NaN NaN 108.68 0.20928 108.68 108.57 108.78 -7.6294E-06 0 0 0 0.0035117 1 67905 56.122 44.487 1 NaN NaN 0 3796000 0 3796000 33333 974 12643 12993 51931 51931 SVILISTVR 9 0 1 Unmodified _SVILISTVR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.3177 2 494.313492 986.612431 89562.5 0.41856 0.0002069 0.011208 5.5404E-06 0.42976 0.00021244 494.313336093055 499.317433507144 80.605 0.49455 80.605 80.351 80.845 -7.6294E-06 130 42 5 0 0 0 0.0060214 1 47872 65.246 37.028 1 1.4125 1.4625 0 10341000 4518200 5822800 33334 1102 12644 12994 51932 51932 SVILISTVR 9 0 1 Unmodified _SVILISTVR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.8192 2 494.313492 986.612431 89437.44 0.34659 0.00017133 0.14431 7.1333E-05 0.4909 0.00024266 494.313479061864 499.317507230062 79.354 0.533 79.354 79.096 79.629 0 147 42 5 0 0 0 0.034216 2 48137 44.349 26.364 1 1.4595 1.4742 0 10042000 3964500 6077300 33335 1102 12644 12994 51933;51934 51933 SVLASASWDK 10 1 0 Unmodified _SVLASASWDK_ 0 0 0 Q15269;A0A0B4J2E5;Q59FM2 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.274 2 532.274564 1062.53457 82983.38 0.47044 0.0002504 0.11319 6.0249E-05 0.58363 0.00031065 532.27450485127 536.281710271666 57.929 0.83906 57.929 57.572 58.411 -3.8147E-06 265 66 6 0 0 0 0.00060252 2 32663 84.213 59.29 1 0.84547 0.92257 0 50343000 29283000 21060000 33336 1756 12645 12995 51935;51936 51936 SVLASASWDK 10 1 0 Unmodified _SVLASASWDK_ 0 0 0 Q15269;A0A0B4J2E5;Q59FM2 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.2817 2 532.274564 1062.53457 NaN NaN NaN -0.18803 -0.00010009 NaN NaN NaN NaN 56.902 0.60834 56.902 56.563 57.171 0 0 0 0 0.0044399 1 32680 72.643 20.789 1 NaN NaN 0 16131000 0 16131000 33337 1756 12645 12995 51937 51937 SVLASASWDK 10 1 0 Unmodified _SVLASASWDK_ 0 0 0 Q15269;A0A0B4J2E5;Q59FM2 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.2817 2 532.274564 1062.53457 84055.53 0.38281 0.00020376 -0.12556 -6.6831E-05 0.25725 0.00013693 532.274422688738 536.281597773912 67.412 0.86057 67.412 67.07 67.931 0 284 55 8 0 0 0 0.0078188 2 34198 56.916 40.713 1 1.2038 0.98265 0 5675900 2625600 3050300 33338 1756 12645 12995 51938;51939 51938 SVLDAAQIVGLNCLR 15 0 1 Unmodified _SVLDAAQIVGLNCLR_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;B4DZP3 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.9492 2 814.943064 1627.87158 69243.55 0.69785 0.00056871 0.50437 0.00041103 1.2022 0.00097974 814.942998519064 819.947092322282 117.89 0.39999 117.89 117.67 118.07 7.6294E-06 90 23 5 0 0 0 0.00022491 1 75480 91.313 91.313 1 2.2668 2.3726 0 10828000 3559100 7268800 33339 390 12646 12996 51940 51940 SVLDFDFEK 9 1 0 Unmodified _SVLDFDFEK_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;F8WC91;C9JIU2 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.269 2 550.268947 1098.52334 82834.93 0.80892 0.00044512 -0.0023853 -1.3126E-06 0.80654 0.00044381 550.770539585943 554.276102922787 100.83 0.76702 100.83 100.34 101.11 0 192 57 4 0 0 0 0.024384 2 61693 48.283 44.298 1 0.9819 0.9657 0 19978000 10870000 9107600 33340 1119 12647 12997 51941;51942 51941 SVLDFDFEK 9 1 0 Unmodified _SVLDFDFEK_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;F8WC91;C9JIU2 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.269 2 550.268947 1098.52334 81812.96 0.58953 0.0003244 0.34184 0.0001881 0.93137 0.0005125 550.269142606922 554.276349343522 100.15 0.88891 100.15 99.642 100.53 0 219 70 4 0 0 0 0.024384 1 62662 48.283 38.695 1 0.95434 0.95353 0 15204000 8467700 6736400 33341 1119 12647 12997 51943 51943 SVLDFDFEK 9 1 0 Unmodified _SVLDFDFEK_ 0 0 0 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;F8WC91;C9JIU2 B9A018 B9A018 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.2689 2 550.268947 1098.52334 83453.21 0.62407 0.00034341 0.036052 1.9838E-05 0.66013 0.00036325 550.269056816983 554.27600456193 112.87 0.61835 112.87 112.54 113.16 7.6294E-06 77 29 4 0 0 0 0.044207 1 64693 40.352 36.417 1 0.68479 0.59984 0 1306700 755340 551370 33342 1119 12647 12997 51944 51944 SVLDQLQDK 9 1 0 Unmodified _SVLDQLQDK_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.2868 2 523.279846 1044.54514 84975.42 0.37164 0.00019447 0.43194 0.00022603 0.80358 0.00042049 523.280060757487 527.286995439316 61.261 0.71433 61.261 60.926 61.641 3.8147E-06 194 52 6 0 0 0 0.00245 1 34885 74.301 6.9671 1 1.1384 1.2272 0 34020000 14492000 19528000 33343 162 12648 12998 51945 51945 SVLDQLQDK 9 1 0 Unmodified _SVLDQLQDK_ 0 0 0 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2803 2 523.279846 1044.54514 84243.67 0.24293 0.00012712 0.50057 0.00026194 0.7435 0.00038906 523.280029904347 527.287085583041 60.125 0.51839 60.125 59.871 60.389 3.8147E-06 157 33 6 0 0 0 0.0046887 1 34983 68.625 19.627 1 1.2821 1.4019 0 40521000 17423000 23098000 33344 162 12648 12998 51946 51946 SVLDQLQDKDPAR 13 1 1 Unmodified _SVLDQLQDKDPAR_ 0 0 1 A0A024R4W4;A0A024R4V5;O95696;Q86X06;B4E3L9;J3KQ61;B4DZ41;B7Z926;Q59G93;Q9Y4Q3;B4DZC2 A0A024R4W4 A0A024R4W4 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.9371 3 495.594967 1483.76307 89873.53 -0.036851 -1.8263E-05 0.30783 0.00015256 0.27098 0.0001343 495.595124448358 501.602646427934 70.724 0.60963 70.724 70.394 71.004 0 99 35 5 0 0 0 0.0064905 1 37101 37.594 37.594 1 1.8142 1.5938 0 2358300 963560 1394700 33345 162 12649 12999 51947 51947 SVLEDVNEK 9 1 0 Unmodified _SVLEDVNEK_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.7717 2 516.764029 1031.5135 81298.99 0.66182 0.00034201 -0.20067 -0.0001037 0.46115 0.00023831 516.763873035796 520.770975514823 38.322 0.72248 38.322 37.948 38.67 -3.8147E-06 230 61 6 0 0 0 0.001367 2 19623 86.332 48.604 1 1.4716 1.6082 0 51105000 20918000 30188000 33346 503 12650 13000 51948;51949 51949 SVLEDVNEK 9 1 0 Unmodified _SVLEDVNEK_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.7715 2 516.764029 1031.5135 83552.04 0.29515 0.00015252 0.18498 9.5593E-05 0.48014 0.00024812 516.764017559617 520.771150873861 37.462 0.72425 37.462 37.057 37.781 0 232 58 6 0 0 0 0.0016565 2 19404 82.563 41.538 1 1.4378 1.6152 0 74299000 33140000 41159000 33347 503 12650 13000 51950;51951 51950 SVLEDVNEK 9 1 0 Unmodified _SVLEDVNEK_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.7714 2 516.764029 1031.5135 83300.48 0.34872 0.0001802 0.0033298 1.7207E-06 0.35205 0.00018193 516.764156388982 520.77112718426 43.673 1.0219 43.673 43.359 44.381 -3.8147E-06 265 69 6 0 0 0 0.011904 1 20588 57.96 26.886 1 1.4144 1.1323 0 8627400 3551900 5075500 33348 503 12650 13000 51952 51952 SVLEDVNEK 9 1 0 Unmodified _SVLEDVNEK_ 0 0 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.7714 2 516.764029 1031.5135 84502.67 0.23603 0.00012197 0.045112 2.3312E-05 0.28115 0.00014529 516.764198872081 520.771122828421 43.787 0.90149 43.787 43.505 44.406 0 237 58 6 0 0 0 0.02542 2 20072 47.869 25.783 1 1.432 1.1654 0 7173400 2940700 4232600 33349 503 12650 13000 51953;51954 51953 SVLELIPELNEK 12 1 0 Unmodified _SVLELIPELNEK_ 0 0 0 E5KNY5;P42704;H7C3W8 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.3916 2 692.390125 1382.7657 73838.13 0.77694 0.00053795 -0.31139 -0.0002156 0.46555 0.00032234 692.390314059617 696.397078301023 116.62 0.8679 116.62 116.12 116.99 0 238 58 7 0 0 0 3.6232E-13 2 74455 135.55 126.86 1 2.286 2.4752 0 43551000 13183000 30368000 33350 1207 12651 13001 51955;51956 51956 SVLELIPELNEK 12 1 0 Unmodified _SVLELIPELNEK_ 0 0 0 E5KNY5;P42704;H7C3W8 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.3983 2 692.390125 1382.7657 74005.02 0.9492 0.00065722 0.11774 8.1524E-05 1.0669 0.00073874 692.39022879056 696.397270247621 128.63 0.66362 128.63 128.33 128.99 0 91 29 4 0 0 0 0.00035606 2 77700 72.2 66.165 1 1.4074 1.1203 0 6698000 2982000 3716000 33351 1207 12651 13001 51957;51958 51957 SVLELIPELNEK 12 1 0 Unmodified _SVLELIPELNEK_ 0 0 0 E5KNY5;P42704;H7C3W8 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.3903 2 692.390125 1382.7657 73715.98 0.77051 0.0005335 -0.29553 -0.00020462 0.47499 0.00032888 692.389974887536 696.396927514354 128.33 0.52098 128.33 128.11 128.63 0 77 21 4 0 0 0 0.00024224 2 76630 73.887 70.908 1 1.3297 1.0888 0 8550800 3392100 5158700 33352 1207 12651 13001 51959;51960 51959 SVLGDVGITEVFSDR 15 0 1 Unmodified _SVLGDVGITEVFSDR_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.4112 2 797.409577 1592.8046 NaN NaN NaN 0.20441 0.000163 NaN NaN NaN NaN 116.27 0.51882 116.27 116.01 116.53 0 0 0 0 1.316E-10 1 75980 113.24 91.868 1 NaN NaN 0 15831000 15831000 0 + 33353 1164 12652 13002 51961 51961 SVLGDVGITEVFSDR 15 0 1 Unmodified _SVLGDVGITEVFSDR_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 797.4113 2 797.409577 1592.8046 NaN NaN NaN 0.0092373 7.3659E-06 NaN NaN NaN NaN 128.45 0.57893 128.45 128.16 128.74 0 0 0 0 0.0052866 1 77530 55.314 36.071 1 NaN NaN 0 7851600 7851600 0 + 33354 1164 12652 13002 51962 51962 SVLGDVGITEVFSDR 15 0 1 Unmodified _SVLGDVGITEVFSDR_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 797.4107 2 797.409577 1592.8046 NaN NaN NaN 0.037754 3.0106E-05 NaN NaN NaN NaN 128.31 0.56491 128.31 128.02 128.59 0 0 0 0 0.0028073 1 76533 62.042 36.656 1 NaN NaN 0 6455700 6455700 0 + 33355 1164 12652 13002 51963 51963 SVLLLAYK 8 1 0 Unmodified _SVLLLAYK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.7953 2 453.786579 905.558604 89621 0.43603 0.00019786 0.15459 7.0152E-05 0.59062 0.00026802 453.786604540582 457.793670838011 86.946 0.2359 86.946 86.848 87.083 0 85 15 7 0 0 0 0.011011 1 52424 70.912 37.174 1 0.66524 0.75004 0 129360000 72066000 57294000 33356 1770 12653 13003 51964 51964 SVLLLAYK 8 1 0 Unmodified _SVLLLAYK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.7942 2 453.786579 905.558604 88711.54 0.46039 0.00020892 0.4572 0.00020747 0.9176 0.00041639 453.786621635578 457.793745894396 85.835 0.27064 85.835 85.677 85.948 0 91 18 7 0 0 0 0.0083247 2 52842 79.116 49.967 1 0.58263 0.67798 0 240550000 152860000 87693000 33357 1770 12653 13003 51965;51966 51966 SVLLLAYK 8 1 0 Unmodified _SVLLLAYK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.5825 1 906.565881 905.558604 64890.54 0.85476 0.0007749 0.35862 0.00032512 1.2134 0.0011 906.565768956038 914.580175317345 85.846 0.17079 85.846 85.722 85.892 0 37 11 5 0 0 0 0.0015928 1 52850 127.84 39.815 1 0.63021 0.65136 0 24965000 17074000 7891500 33358 1770 12653 13003 51967 51967 SVLLLAYK 8 1 0 Unmodified _SVLLLAYK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.7937 2 453.786579 905.558604 91284.18 0.33018 0.00014983 0.078007 3.5398E-05 0.40819 0.00018523 453.786586104814 457.793611226772 94.45 1.0255 94.45 94.004 95.03 0 308 86 5 0 0 0 0.031924 1 59009 50.966 16.142 1 0.73248 0.77846 0 36197000 20035000 16162000 33359 1770 12653 13003 51968 51968 SVLLLAYK 8 1 0 Unmodified _SVLLLAYK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 453.7868 2 453.786579 905.558604 89533.27 0.22814 0.00010353 0.044318 2.0111E-05 0.27246 0.00012364 453.786590314469 457.793568030391 99.508 0.34664 99.508 99.318 99.664 0 90 19 6 0 0 0 0.030669 1 56255 51.787 31.941 1 1.2692 1.0166 0 8502800 3753500 4749300 33360 1770 12653 13003 51969 51969 SVLLLAYK 8 1 0 Unmodified _SVLLLAYK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 457.794 2 453.786579 905.558604 91145.34 0.012362 5.6096E-06 0.50863 0.00023081 0.52099 0.00023642 453.786705313777 457.793800434194 99.262 0.43011 99.262 99.032 99.462 0 117 26 7 0 0 0 0.011877 2 55240 68.915 46.784 1 1.3786 1.1225 0 7312400 2990500 4321900 33361 1770 12653 13003 51970;51971 51970 SVLLLAYKPMEGNFEEIAR 19 1 1 Oxidation (M) _SVLLLAYKPM(ox)EGNFEEIAR_ SVLLLAYKPM(1)EGNFEEIAR SVLLLAYKPM(69.74)EGNFEEIAR 0 1 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.0522 3 732.717157 2195.12964 70704.14 0.7701 0.00056427 -0.62985 -0.0004615 0.14025 0.00010277 733.051518611512 739.059018573382 106.03 0.84216 106.03 105.56 106.4 0 439 61 10 0 0 0 3.2856E-06 2 65548 69.737 69.737 1 0.98773 1.1867 0 72527000 37556000 34971000 33362 1770 12654 13004 51972;51973 51973 1640 SVLLLAYKPMEGNFEEIAR 19 1 1 Oxidation (M) _SVLLLAYKPM(ox)EGNFEEIAR_ SVLLLAYKPM(1)EGNFEEIAR SVLLLAYKPM(110.77)EGNFEEIAR 0 1 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.0602 3 732.717157 2195.12964 69998.45 0.85108 0.0006236 -0.40544 -0.00029708 0.44564 0.00032652 733.05157698779 738.724857588222 105.06 0.91501 105.06 104.65 105.56 7.6294E-06 494 68 10 0 0 0 3.3331E-13 4 66510 110.77 110.77 1 0.92714 1.0925 0 97865000 49240000 48625000 33363 1770 12654 13004 51974;51975;51976;51977 51975 1640 SVLLLAYKPMEGNFEEIAR 19 1 1 Oxidation (M) _SVLLLAYKPM(ox)EGNFEEIAR_ SVLLLAYKPM(1)EGNFEEIAR SVLLLAYKPM(92.49)EGNFEEIAR 0 1 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.0602 3 732.717157 2195.12964 69553.48 0.46319 0.00033939 0.21233 0.00015558 0.67552 0.00049496 733.051427111388 738.724711875999 116.56 0.64818 116.56 116.31 116.96 0 130 25 7 0 0 0 9.6579E-09 1 68427 92.492 92.492 1 0.82832 0.72041 0 19340000 10793000 8547400 33364 1770 12654 13004 51978 51978 1640 SVLLLAYKPMEGNFEEIAR 19 1 1 Unmodified _SVLLLAYKPMEGNFEEIAR_ 0 0 1 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.3943 3 727.385518 2179.13473 71348.83 0.87198 0.00063427 0.60662 0.00044124 1.4786 0.0010755 727.72001258593 733.727690924776 123.98 0.68031 123.98 123.78 124.46 0 100 27 7 0 0 0 0.00010454 1 74243 45.704 45.704 1 1.4704 1.2138 0 4124200 1608400 2515800 33365 1770 12654 13005 51979 51979 SVLRPLDK 8 1 1 Acetyl (Protein N-term) _(ac)SVLRPLDK_ 1 0 1 A0A024R1Q3;Q9NSP4 A0A024R1Q3 A0A024R1Q3 C22orf18;CENPM Centromere protein M MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.2418 2 485.290017 968.565481 89729.59 0.20371 9.8858E-05 -0.85503 -0.00041494 -0.65132 -0.00031608 485.289480732621 494.300932734347 64.646 0.67303 64.646 64.323 64.996 0 230 59 5 0 0 0 0.050545 1 38090 40.728 40.728 1 0.85144 0.95667 0 13089000 6060900 7028000 33366 83 12655 13006 51980 51980 SVNDQPSGNLPFLKPDDIQYFDK 23 2 0 Unmodified _SVNDQPSGNLPFLKPDDIQYFDK_ 0 0 1 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.4442 3 879.765892 2636.27585 65327.69 0.84699 0.00074515 0.085504 7.5223E-05 0.93249 0.00082037 880.099749965817 885.443619899412 112.86 0.39371 112.86 112.69 113.08 0 158 28 8 0 0 0 9.0973E-06 2 71300 44.258 44.258 1 1.1732 1.3853 0 15163000 7122900 8040000 33367 1408 12656 13007 51981;51982 51981 SVNDQPSGNLPFLKPDDIQYFDK 23 2 0 Unmodified _SVNDQPSGNLPFLKPDDIQYFDK_ 0 0 1 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.4338 3 879.765892 2636.27585 65495.32 0.7441 0.00065463 -0.29906 -0.0002631 0.44504 0.00039153 880.43293277428 885.109021206341 112.26 0.4037 112.26 112.07 112.47 0 163 30 8 0 0 0 1.0647E-05 2 72618 43.349 43.349 1 1.1898 1.3614 0 18099000 8708100 9391000 33368 1408 12656 13007 51983;51984 51984 SVNDQPSGNLPFLKPDDIQYFDK 23 2 0 Unmodified _SVNDQPSGNLPFLKPDDIQYFDK_ 0 0 1 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 880.1012 3 879.765892 2636.27585 66074.97 0.77777 0.00068425 0.11466 0.00010088 0.89243 0.00078513 880.434237483385 885.442926151756 123.56 0.32783 123.56 123.41 123.73 7.6294E-06 76 13 9 0 0 0 0.022326 1 73868 19.975 17.01 1 0.73693 0.63405 0 6386900 3751600 2635400 33369 1408 12656 13007 51985 51985 SVNDQPSGNLPFLKPDDIQYFDK 23 2 0 Unmodified _SVNDQPSGNLPFLKPDDIQYFDK_ 0 0 1 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 880.101 3 879.765892 2636.27585 64717.63 0.48631 0.00042784 0.003393 2.9851E-06 0.48971 0.00043083 880.100184708363 885.44297646423 123.42 0.29587 123.42 123.28 123.57 0 72 11 9 0 0 0 0.04994 1 72861 14.064 14.064 1 0.81595 0.69406 0 5580800 3459500 2121300 33370 1408 12656 13007 51986 51986 SVNELIYK 8 1 0 Unmodified _SVNELIYK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.2767 2 483.26875 964.522947 88410.85 0.17524 8.4687E-05 0.18121 8.7574E-05 0.35645 0.00017226 483.268749282696 487.275820056865 54.286 1.4255 54.286 53.492 54.917 0 572 120 7 0 0 0 0.0080145 3 30590 80.455 39.909 1 0.95425 1.1295 0 434970000 229330000 205640000 33371 240 12657 13008 51987;51988;51989 51989 SVNELIYK 8 1 0 Unmodified _SVNELIYK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.2696 2 483.26875 964.522947 87183.09 0.10027 4.8459E-05 0.12092 5.8437E-05 0.22119 0.0001069 483.268760784959 487.275763579228 52.791 1.3439 52.791 52.143 53.487 3.8147E-06 568 112 7 0 0 0 0.011877 2 30090 68.915 36.444 1 0.94537 1.1124 0 380330000 187060000 193270000 33372 240 12657 13008 51990;51991 51991 SVNELIYK 8 1 0 Unmodified _SVNELIYK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.2758 2 483.26875 964.522947 86520.74 0.059083 2.8553E-05 0.23695 0.00011451 0.29603 0.00014306 483.268795955089 487.275863346114 62.317 1.2914 62.317 61.809 63.1 0 481 108 8 0 0 0 0.013465 2 31865 65.252 32.782 1 0.86399 0.70302 0 30539000 16843000 13696000 33373 240 12657 13008 51992;51993 51993 SVNELIYK 8 1 0 Unmodified _SVNELIYK_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.2763 2 483.26875 964.522947 86948.59 0.10814 5.2258E-05 0.11832 5.718E-05 0.22646 0.00010944 483.26869583327 487.27580830489 62.775 1.2773 62.775 62.235 63.512 3.8147E-06 418 103 8 0 0 0 0.059544 1 31428 40.268 22.233 1 0.90006 0.74301 0 30971000 16470000 14501000 33374 240 12657 13008 51994 51994 SVNLLVVK 8 1 0 Unmodified _SVNLLVVK_ 0 0 0 Q14008;Q8IYN5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.2912 2 436.284203 870.553853 95671.1 0.22041 9.616E-05 -0.041928 -1.8293E-05 0.17848 7.7868E-05 436.284066674262 440.291252414935 77.364 0.71487 77.364 77.092 77.807 0 148 59 5 0 0 0 0.031924 1 46696 50.966 18.495 1 1.3645 1.4265 0 10892000 4650600 6241700 33375 1725 12658 13009 51995 51995 SVPGVCGASQTHQK 14 1 0 Unmodified _SVPGVCGASQTHQK_ 0 0 0 Q9Y2R4;Q59H21;A0A087X1P7;A0A087WTD6;A0A087X069 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.8608 2 728.354082 1454.69361 73255.86 -0.010436 -7.6008E-06 -0.63006 -0.00045891 -0.64049 -0.00046651 728.353985340314 732.36070834628 19.698 0.1199 19.698 19.64 19.76 0 16 5 4 0 0 0 0.0036845 2 6088 46.73 37.042 1 1.1909 1.2339 0 4716500 2845100 1871400 33376 2126 12659 13010 51996;51997 51997 SVPGVCGASQTHQK 14 1 0 Unmodified _SVPGVCGASQTHQK_ 0 0 0 Q9Y2R4;Q59H21;A0A087X1P7;A0A087WTD6;A0A087X069 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.8567 2 728.354082 1454.69361 73741.94 0.24537 0.00017872 0.55779 0.00040627 0.80316 0.00058498 728.354510743489 732.361699155408 21.228 0.14586 21.228 21.15 21.296 0 24 7 4 0 0 0 0.0069087 1 6325 41.283 26.617 1 0.83223 0.69754 0 1631100 938540 692550 33377 2126 12659 13010 51998 51998 SVPTTQCLDNSK 12 1 0 Unmodified _SVPTTQCLDNSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3309 2 675.321916 1348.62928 74301.8 0.71059 0.00047988 0.14704 9.9296E-05 0.85763 0.00057917 675.32218425145 679.328750664544 30.41 0.54424 30.41 30.152 30.696 -1.9073E-06 145 47 4 0 0 0 0.00014601 1 14779 93.096 83.761 1 1.7664 1.8726 0 16170000 5150600 11020000 33378 1569 12660 13011 51999 51999 SVPTTQCLDNSK 12 1 0 Unmodified _SVPTTQCLDNSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3298 2 675.321916 1348.62928 74540.57 0.92435 0.00062423 0.28166 0.00019021 1.206 0.00081444 675.322423104378 679.328818506665 29.959 0.63408 29.959 29.666 30.3 0 174 49 5 0 0 0 0.00019631 1 14437 90.149 82.503 1 1.5798 1.606 0 30207000 10331000 19876000 33379 1569 12660 13011 52000 52000 SVPTTQCLDNSK 12 1 0 Unmodified _SVPTTQCLDNSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.3295 2 675.321916 1348.62928 73463.42 0.52703 0.00035592 -0.17507 -0.00011823 0.35196 0.00023769 675.321770069041 679.328844667567 34.933 0.81876 34.933 34.551 35.37 0 292 70 7 0 0 0 0.048658 1 15368 32.859 28.842 1 4.7683 3.7506 0 11115000 2968300 8146300 33380 1569 12660 13011 52001 52001 SVPTTQCLDNSK 12 1 0 Unmodified _SVPTTQCLDNSK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.3289 2 675.321916 1348.62928 73759.88 0.73877 0.00049891 -0.12994 -8.7753E-05 0.60882 0.00041115 675.32219116104 679.328684030096 35.222 0.99578 35.222 34.684 35.679 0 323 83 6 0 0 0 0.018528 1 14968 40.715 36.698 1 3.9514 3.254 0 10532000 2029500 8502800 33381 1569 12660 13011 52002 52002 SVPVTKPVPVTK 12 2 0 Unmodified _SVPVTKPVPVTK_ 0 0 1 Q96KM6 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.4034 2 626.387188 1250.75982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.933 1 34.933 34.433 35.433 0 0 0 0 0.012433 1 17518 66.595 50.966 1 33382 1976 12661 13012 52003 52003 SVPVTVDDDDDDNDPENR 18 0 1 Unmodified _SVPVTVDDDDDDNDPENR_ 0 0 0 A4LAA3;P46100;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1009.4163 2 1008.91688 2015.8192 61668.8 0.49437 0.00049877 -0.98384 -0.00099261 -0.48947 -0.00049383 1009.41657615328 1014.42237905675 48.559 0.50732 48.559 48.311 48.819 3.8147E-06 185 37 6 0 0 0 4.0497E-06 5 26386 84.468 83.778 1 1.0357 1.0557 0 30423000 14026000 16397000 33383 672 12662 13013 52004;52005;52006;52007;52008 52007 SVPVTVDDDDDDNDPENR 18 0 1 Unmodified _SVPVTVDDDDDDNDPENR_ 0 0 0 A4LAA3;P46100;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1008.9219 2 1008.91688 2015.8192 61381.02 0.26085 0.00026318 0.084291 8.5043E-05 0.34515 0.00034822 1008.91669046716 1013.92148472169 47.637 0.56637 47.637 47.305 47.871 -3.8147E-06 166 39 6 0 0 0 3.6278E-05 2 26313 62.287 62.169 1 0.8405 0.8664 0 21441000 9962800 11479000 33384 672 12662 13013 52009;52010 52009 SVPVTVDDDDDDNDPENR 18 0 1 Unmodified _SVPVTVDDDDDDNDPENR_ 0 0 0 A4LAA3;P46100;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1008.913 2 1008.91688 2015.8192 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.781 1 47.781 47.281 48.281 -3.8147E-06 0 0 0 0.00043947 1 26629 57.414 51.69 1 33385 672 12662 13013 52011 52011 SVQEFLTDMK 10 1 0 Unmodified _SVQEFLTDMK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.3033 2 599.294639 1196.57472 NaN NaN NaN 0.93608 0.00056099 NaN NaN NaN NaN 100.81 0.5519 100.81 100.47 101.03 0 0 0 0 0.022123 1 56967 54.066 38.915 1 NaN NaN 0 2652800 0 2652800 33386 2103 12663 13014 52012 52012 SVQEFLTDMK 10 1 0 Unmodified _SVQEFLTDMK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.303 2 599.294639 1196.57472 NaN NaN NaN 0.27885 0.00016711 NaN NaN NaN NaN 100.7 0.66132 100.7 100.32 100.98 0 0 0 0 0.0021686 1 56067 81.972 67.814 1 NaN NaN 0 3260300 0 3260300 33387 2103 12663 13014 52013 52013 SVQEGENPDDGVR 13 0 1 Unmodified _SVQEGENPDDGVR_ 0 0 0 P42696;A2A2V2;Q5TCT4;H7C5M1 P42696 P42696 RBM34 RNA-binding protein 34 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3202 2 701.315677 1400.6168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.771 1 21.771 21.271 22.271 0 0 0 0 0.00090378 1 7987 79.201 46.787 1 33388 1566 12664 13015 52014 52014 SVQEGENPDDGVR 13 0 1 Unmodified _SVQEGENPDDGVR_ 0 0 0 P42696;A2A2V2;Q5TCT4;H7C5M1 P42696 P42696 RBM34 RNA-binding protein 34 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.3207 2 701.315677 1400.6168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.575 1 21.575 21.075 22.075 -1.9073E-06 0 0 0 1.5124E-06 1 7700 102.52 53.729 1 33389 1566 12664 13015 52015 52015 SVQEGENPDDGVR 13 0 1 Unmodified _SVQEGENPDDGVR_ 0 0 0 P42696;A2A2V2;Q5TCT4;H7C5M1 P42696 P42696 RBM34 RNA-binding protein 34 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.32 2 701.315677 1400.6168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.592 1 21.592 21.092 22.092 0 0 0 0 3.3502E-06 1 7714 96.015 56.71 1 33390 1566 12664 13015 52016 52016 SVQETVLPIK 10 1 0 Unmodified _SVQETVLPIK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;A0A075BPP5 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.3297 2 557.329339 1112.64412 83174.2 0.43453 0.00024217 -0.24605 -0.00013713 0.18848 0.00010505 557.329265341829 561.335996101789 85.656 0.56409 85.656 85.341 85.906 0 119 35 4 0 0 0 0.0029629 1 46823 66.692 58.767 1 0.62117 0.50896 0 2468400 1434400 1034000 33391 623 12665 13016 52017 52017 SVQETVLPIK 10 1 0 Unmodified _SVQETVLPIK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;A0A075BPP5 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.33 2 557.329339 1112.64412 82582.45 0.6276 0.00034978 -0.5357 -0.00029856 0.091896 5.1216E-05 557.329025457638 561.335946894751 85.702 0.64736 85.702 85.321 85.968 0 121 39 4 0 0 0 0.0073232 1 46032 57.59 49.664 1 0.60282 0.47347 0 2051200 1320600 730560 33392 623 12665 13016 52018 52018 SVQEVLQK 8 1 0 Unmodified _SVQEVLQK_ 0 0 0 A8K7H4;O43929;Q96B14;B7Z2M4;Q53TH5;B7Z632 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.7749 2 465.766374 929.518196 89352.8 0.63913 0.00029769 0.050223 2.3392E-05 0.68936 0.00032108 465.766232078751 469.773376237665 31.562 0.26088 31.562 31.435 31.696 0 67 23 4 0 0 0 0.0069463 2 15641 85.064 49.184 1 1.7216 1.7267 0 13798000 5349600 8448400 + 33393 772 12666 13017 52019;52020 52019 SVQEVLQK 8 1 0 Unmodified _SVQEVLQK_ 0 0 0 A8K7H4;O43929;Q96B14;B7Z2M4;Q53TH5;B7Z632 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 469.774 2 465.766374 929.518196 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.143 1 36.143 35.643 36.643 0 0 0 0 0.038943 1 16183 58.604 26.134 1 + 33394 772 12666 13017 52021 52021 SVQNDSQAIAEVLNQLK 17 1 0 Unmodified _SVQNDSQAIAEVLNQLK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 928.989 2 928.989254 1855.96396 NaN NaN NaN 0.20804 0.00019327 NaN NaN NaN NaN 120.67 0.51372 120.67 120.43 120.94 0 0 0 0 1.1639E-26 1 77897 138.89 127.03 1 NaN NaN 0 18920000 18920000 0 33395 1486 12667 13018 52022 52022 SVQNDSQAIAEVLNQLK 17 1 0 Unmodified _SVQNDSQAIAEVLNQLK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.4926 2 928.989254 1855.96396 63788.32 0.95586 0.00088798 -0.17212 -0.00015989 0.78374 0.00072809 928.989110006271 933.497178401603 120.18 0.48101 120.18 119.94 120.42 7.6294E-06 218 34 8 0 0 0 3.816E-09 3 79261 105.95 105.95 1 0.52449 0.53395 0 30594000 20113000 10482000 33396 1486 12667 13018 52023;52024;52025 52024 SVQNDSQAIAEVLNQLK 17 1 0 Unmodified _SVQNDSQAIAEVLNQLK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 928.9895 2 928.989254 1855.96396 62577.68 1.0163 0.00094409 -0.68176 -0.00063335 0.33449 0.00031073 928.988598311502 932.994334705968 134.01 0.37277 134.01 133.81 134.18 0 79 15 8 0 0 0 2.3927E-05 1 81658 82.925 82.925 1 0.55275 0.42895 0 12789000 8233900 4555100 33397 1486 12667 13018 52026 52026 SVQNDSQAIAEVLNQLK 17 1 0 Unmodified _SVQNDSQAIAEVLNQLK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 929.4924 2 928.989254 1855.96396 NaN NaN NaN 1.0321 0.00095885 NaN NaN NaN NaN 133.81 0.47548 133.81 133.5 133.98 0 0 0 0 7.0271E-07 1 80582 86.803 73.823 1 NaN NaN 0 11838000 11838000 0 33398 1486 12667 13018 52027 52027 SVQPTVSLGGFEITPPVVLR 20 0 1 Unmodified _SVQPTVSLGGFEITPPVVLR_ 0 0 0 Q9NX34 Q9NX34 Q9NX34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1048.5928 2 1048.59115 2095.16774 60321.32 0.63319 0.00066395 0.24701 0.00025901 0.88019 0.00092296 1048.59126951288 1053.59578654501 130.3 0.58459 130.3 130.05 130.64 0 221 37 8 0 0 0 3.0028E-07 1 84826 84.753 84.753 1 0.97331 1.007 0 37336000 18761000 18575000 33399 2078 12668 13019 52028 52028 SVQPTVSLGGFEITPPVVLR 20 0 1 Unmodified _SVQPTVSLGGFEITPPVVLR_ 0 0 0 Q9NX34 Q9NX34 Q9NX34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1053.5962 2 1048.59115 2095.16774 60035.14 0.5903 0.00061898 0.14743 0.0001546 0.73773 0.00077357 1049.09254308006 1054.09690584466 129.91 0.57481 129.91 129.64 130.21 0 243 39 8 0 0 0 2.2926E-17 2 86701 113.63 113.63 1 0.97606 1.0996 0 46575000 23718000 22857000 33400 2078 12668 13019 52029;52030 52029 SVQTTLQTDEVK 12 1 0 Unmodified _SVQTTLQTDEVK_ 0 0 0 B0QZ43;E5RHW4;B2RDK6;D3DR65;O94905;O75477 B0QZ43 B0QZ43 ERLIN1;ERLIN2;SPFH1 Erlin-2;Erlin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.8585 2 674.851364 1347.68817 73190.59 0.54007 0.00036447 0.43955 0.00029663 0.97962 0.0006611 674.851538524424 678.85853119164 44.015 0.46376 44.015 43.756 44.22 -3.8147E-06 144 42 5 0 0 0 1.1836E-22 2 23558 155.15 155.15 1 1.5586 1.6147 0 17087000 7332800 9754100 33401 808 12669 13020 52031;52032 52031 SVQTTLQTDEVK 12 1 0 Unmodified _SVQTTLQTDEVK_ 0 0 0 B0QZ43;E5RHW4;B2RDK6;D3DR65;O94905;O75477 B0QZ43 B0QZ43 ERLIN1;ERLIN2;SPFH1 Erlin-2;Erlin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.8516 2 674.851364 1347.68817 72843.34 1.0263 0.00069262 1.64 0.0011068 2.6663 0.0017994 674.851357745425 679.361792532697 43.289 0.56259 43.289 43.057 43.62 0 191 46 7 0 0 0 4.9915E-06 3 23428 110.39 94.249 1 2.5813 2.8896 0 54009000 15220000 38788000 33402 808 12669 13020 52033;52034;52035 52034 SVQTTLQTDEVK 12 1 0 Unmodified _SVQTTLQTDEVK_ 0 0 0 B0QZ43;E5RHW4;B2RDK6;D3DR65;O94905;O75477 B0QZ43 B0QZ43 ERLIN1;ERLIN2;SPFH1 Erlin-2;Erlin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.8587 2 674.851364 1347.68817 75652.37 0.33658 0.00022714 0.41639 0.000281 0.75297 0.00050814 674.851869130077 678.858635376663 51.306 0.29889 51.306 51.143 51.442 -3.8147E-06 103 21 6 0 0 0 0.00019323 2 25234 77.379 77.379 1 1.1183 0.92785 0 2289100 1093400 1195800 33403 808 12669 13020 52036;52037 52036 SVSLTGAPESVQK 13 1 0 Unmodified _SVSLTGAPESVQK_ 0 0 0 A0A087WTP3;Q92945;M0R0I5;M0QYH3;M0QXW7 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8563 2 651.848624 1301.6827 78043.56 0.80795 0.00052666 -0.38077 -0.0002482 0.42718 0.00027846 651.848568658324 655.855463771726 49.22 0.47356 49.22 48.955 49.429 0 158 34 8 0 0 0 8.1354E-06 2 26871 102.42 79.782 1 2.5173 2.5727 0 28301000 8896500 19405000 33404 403 12670 13021 52038;52039 52038 SVSLTGAPESVQK 13 1 0 Unmodified _SVSLTGAPESVQK_ 0 0 0 A0A087WTP3;Q92945;M0R0I5;M0QYH3;M0QXW7 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.8564 2 651.848624 1301.6827 77814.72 0.27627 0.00018009 -0.03763 -2.4529E-05 0.23864 0.00015556 652.349935018111 655.855618689436 47.773 0.37463 47.773 47.63 48.005 0 96 26 6 0 0 0 3.625E-09 2 26611 121.61 90.81 1 2.2089 2.421 0 40948000 10828000 30120000 33405 403 12670 13021 52040;52041 52040 SVSLTGAPESVQK 13 1 0 Unmodified _SVSLTGAPESVQK_ 0 0 0 A0A087WTP3;Q92945;M0R0I5;M0QYH3;M0QXW7 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.8564 2 651.848624 1301.6827 77662.9 0.7677 0.00050042 -0.24389 -0.00015898 0.52381 0.00034144 651.84835310273 655.855560642229 56.757 0.48365 56.757 56.512 56.996 0 103 31 4 0 0 0 0.012922 1 28743 38.875 28.87 1 1.6639 1.3863 0 1763300 626680 1136600 33406 403 12670 13021 52042 52042 SVSLTGAPESVQK 13 1 0 Unmodified _SVSLTGAPESVQK_ 0 0 0 A0A087WTP3;Q92945;M0R0I5;M0QYH3;M0QXW7 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.856 2 651.848624 1301.6827 NaN NaN NaN -0.29189 -0.00019027 NaN NaN NaN NaN 57.258 0.42589 57.258 57.006 57.432 3.8147E-06 0 0 0 0.019879 1 28282 48.004 30.568 1 NaN NaN 0 1101500 0 1101500 33407 403 12670 13021 52043 52043 SVSLVGEDER 10 0 1 Unmodified _SVSLVGEDER_ 0 0 0 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.7764 2 545.772385 1089.53022 83459.03 0.41055 0.00022407 -0.13812 -7.5384E-05 0.27242 0.00014868 545.772255824253 550.77641174003 46.093 0.54411 46.093 45.856 46.4 3.8147E-06 128 37 5 0 0 0 0.061197 1 21611 34.803 26.863 1 0.92124 0.79796 0 2685200 1277600 1407700 33408 899;1099 12671 13022 52044 52044 SVSLVGEDERK 11 1 1 Unmodified _SVSLVGEDERK_ 0 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.822 2 609.819867 1217.62518 76437.36 0.35133 0.00021425 -0.15781 -9.6237E-05 0.19352 0.00011801 609.819629671316 618.831145440956 26.631 0.66194 26.631 26.403 27.065 0 195 40 9 0 0 0 1.5814E-10 2 11913 140.45 120.66 1 0.80751 0.97709 0 217700000 125010000 92693000 33409 899;1099 12672 13023 52045;52046 52046 SVSLVGEDERK 11 1 1 Unmodified _SVSLVGEDERK_ 0 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 412.8897 3 406.882337 1217.62518 93720.84 -0.11499 -4.6789E-05 0.30539 0.00012426 0.19039 7.7467E-05 406.882370853832 412.889930667968 26.631 0.39918 26.631 26.436 26.835 0 96 24 7 0 0 0 0.020056 2 12036 30.563 23.904 1 0.73651 0.87715 0 48134000 29759000 18375000 33410 899;1099 12672 13023 52047;52048 52048 SVSLVGEDERK 11 1 1 Unmodified _SVSLVGEDERK_ 0 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.8199 2 609.819867 1217.62518 76255.05 0.60515 0.00036903 0.072655 4.4307E-05 0.67781 0.00041334 609.819963738676 618.831378468409 26.141 0.7604 26.141 25.69 26.451 0 190 46 9 0 0 0 1.521E-22 2 11551 190.96 154.41 1 0.76361 0.90312 0 176200000 102950000 73260000 33411 899;1099 12672 13023 52049;52050 52050 SVSLVGEDERK 11 1 1 Unmodified _SVSLVGEDERK_ 0 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8311 2 609.819867 1217.62518 69246.39 0.27767 0.00016933 -0.32087 -0.00019567 -0.043199 -2.6344E-05 609.819842373382 618.831092749953 29.742 0.75212 29.742 29.372 30.124 0 325 54 10 0 0 0 1.3117E-05 2 12090 109.66 94.513 1 1.1473 1.0092 0 34079000 16542000 17538000 33412 899;1099 12672 13023 52051;52052 52052 SVSLVGEDERK 11 1 1 Unmodified _SVSLVGEDERK_ 0 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 412.8898 3 406.882337 1217.62518 92689.21 -0.22617 -9.2023E-05 0.25192 0.0001025 0.025758 1.048E-05 406.882334206676 412.889885711904 29.747 0.49542 29.747 29.482 29.977 1.9073E-06 132 37 4 0 0 0 0.054151 1 12188 14.561 10.675 1 1.0707 0.89038 0 6021100 2895500 3125700 33413 899;1099 12672 13023 52053 52053 SVSLVGEDERK 11 1 1 Unmodified _SVSLVGEDERK_ 0 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.8201 2 609.819867 1217.62518 75563.9 0.10319 6.2928E-05 -0.010403 -6.3439E-06 0.092788 5.6584E-05 609.819969745697 618.831161777722 29.772 0.67229 29.772 29.482 30.154 1.9073E-06 279 42 9 0 0 0 1.3396E-05 2 11633 110.14 90.349 1 1.0405 0.88401 0 26646000 12818000 13828000 33414 899;1099 12672 13023 52054;52055 52054 SVSPCSNVESR 11 0 1 Unmodified _SVSPCSNVESR_ 0 0 0 A0A140VK53;Q9UQ35;I3L182;Q9UQ39;I3L4D8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.284 2 611.280051 1220.54555 NaN NaN NaN -0.22696 -0.00013873 NaN NaN NaN NaN 21.063 0.18752 21.063 20.979 21.166 0 0 0 0 0.053334 1 7429 43.282 20.542 1 NaN NaN 0 1903300 0 1903300 33415 619 12673 13024 52056 52056 SVSSNDAYNFNLEEGVHLTPFR 22 0 1 Unmodified _SVSSNDAYNFNLEEGVHLTPFR_ 0 0 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.0645 3 832.731182 2495.17172 67230.46 0.83393 0.00069444 -0.18791 -0.00015648 0.64602 0.00053796 833.065108095459 836.401441293263 109.71 0.4414 109.71 109.45 109.89 0 143 29 7 0 0 0 2.3998E-08 1 70470 63.726 63.726 1 0.86342 0.86619 0 17370000 8444000 8926000 33416 1075 12674 13025 52057 52057 SVSSNVASVSPIPAGSK 17 1 0 Unmodified _SVSSNVASVSPIPAGSK_ 0 0 0 B3KM42;E9PHI6;B4DDM4;Q9Y6G9 B3KM42 B3KM42 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.9282 2 793.922852 1585.83115 NaN NaN NaN -2.3245 -0.0018455 NaN NaN NaN NaN 65.399 0.35802 65.399 65.171 65.529 0 0 0 0 0.0011563 1 38556 60.364 50.359 1 NaN NaN 0 3957300 0 3957300 33417 901 12675 13026 52058 52058 SVSSVLSSLTPAK 13 1 0 Unmodified _SVSSVLSSLTPAK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q9BRL8;F8W9Y9 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.3618 2 638.361367 1274.70818 76973.11 0.68825 0.00043935 0.12974 8.2824E-05 0.818 0.00052218 638.361589283304 642.36835616011 94.626 0.70964 94.626 94.271 94.981 -7.6294E-06 242 65 6 0 0 0 0.00010161 3 57407 92.445 81.693 1 0.8359 0.86046 0 28836000 14962000 13874000 33418 1223 12676 13027 52059;52060;52061 52061 SVSSVLSSLTPAK 13 1 0 Unmodified _SVSSVLSSLTPAK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q9BRL8;F8W9Y9 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.363 2 638.361367 1274.70818 77148.3 0.54787 0.00034974 0.18975 0.00012113 0.73762 0.00047087 638.361739643676 642.368329312913 93.746 0.80378 93.746 93.304 94.108 0 220 71 6 0 0 0 0.0035111 1 58004 49.5 40.143 1 0.72879 0.80166 0 42466000 24977000 17488000 33419 1223 12676 13027 52062 52062 SVSSVLSSLTPAK 13 1 0 Unmodified _SVSSVLSSLTPAK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q9BRL8;F8W9Y9 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.3613 2 638.361367 1274.70818 77056.12 0.72857 0.00046509 0.16514 0.00010542 0.89371 0.00057051 638.36141749367 642.368543155715 108.27 0.68921 108.27 108.02 108.71 -7.6294E-06 131 34 8 0 0 0 0.0022626 2 62164 54.471 54.471 1 1.8966 1.5077 0 10009000 3738500 6270400 33420 1223 12676 13027 52063;52064 52064 SVSSVLSSLTPAK 13 1 0 Unmodified _SVSSVLSSLTPAK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q59FW1;H0Y4T7;Q9BRL8;F8W9Y9 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.3616 2 638.361367 1274.70818 76109.54 0.63515 0.00040545 -0.019369 -1.2365E-05 0.61578 0.00039309 638.361299969375 642.368402606629 108.14 0.56907 108.14 107.87 108.44 0 122 27 6 0 0 0 0.00012317 2 61127 90.653 90.653 1 1.8132 1.4843 0 8502100 2781100 5721000 33421 1223 12676 13027 52065;52066 52066 SVTEQGAELSNEER 14 0 1 Unmodified _SVTEQGAELSNEER_ 0 0 0 D0PNI1;P63104;E7EX29;E7ESK7;E5RGE1;Q6LD62;E5RIR4;E9PD24;E7EVZ2 D0PNI1 D0PNI1 YWHAZ;14-3-3 protein 14-3-3 protein zeta/delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.8624 2 774.860448 1547.70634 69181.37 0.83626 0.00064798 0.87471 0.00067778 1.711 0.0013258 774.860411465771 779.864854203571 32.393 0.5008 32.393 32.156 32.657 0 189 44 6 0 0 0 4.2749E-05 1 15979 94.191 83.883 1 1.8448 1.868 0 15229000 5579300 9649600 33422 1182 12677 13028 52067 52067 SVTEQGAELSNEER 14 0 1 Unmodified _SVTEQGAELSNEER_ 0 0 0 D0PNI1;P63104;E7EX29;E7ESK7;E5RGE1;Q6LD62;E5RIR4;E9PD24;E7EVZ2 D0PNI1 D0PNI1 YWHAZ;14-3-3 protein 14-3-3 protein zeta/delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.8612 2 774.860448 1547.70634 70946.8 0.91202 0.00070669 0.58409 0.00045259 1.4961 0.0011593 775.362764386652 779.864679274695 31.84 0.34474 31.84 31.636 31.981 0 122 30 6 0 0 0 2.5922E-06 1 15759 105.03 95.144 1 2.1512 2.1583 0 17453000 7066900 10386000 33423 1182 12677 13028 52068 52068 SVTEQGAELSNEER 14 0 1 Unmodified _SVTEQGAELSNEER_ 0 0 0 D0PNI1;P63104;E7EX29;E7ESK7;E5RGE1;Q6LD62;E5RIR4;E9PD24;E7EVZ2 D0PNI1 D0PNI1 YWHAZ;14-3-3 protein 14-3-3 protein zeta/delta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 774.8608 2 774.860448 1547.70634 68660.26 0.45378 0.00035162 0.11932 9.2454E-05 0.5731 0.00044407 774.860013081628 779.864731803379 38.101 0.5283 38.101 37.881 38.409 3.8147E-06 185 40 6 0 0 0 0.0093378 2 16716 37.18 37.18 1 1.0167 0.87149 0 2836500 1531700 1304800 33424 1182 12677 13028 52069;52070 52070 SVTHFDSLAVIDIPGADTLDK 21 1 0 Unmodified _SVTHFDSLAVIDIPGADTLDK_ 0 0 0 Q8TAF6;O60488;B4DH39;D6RF95;D6RFW9;D6RDA8;D6RD96 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.0491 3 738.714469 2213.12158 71306.12 0.91056 0.00067265 -0.046033 -3.4005E-05 0.86453 0.00063864 739.048772543436 741.385814053712 116.31 0.54897 116.31 116.01 116.56 0 207 35 8 0 0 0 2.3902E-07 2 74277 56.055 56.055 1 1.7615 1.7305 0 23282000 9322100 13960000 33425 1394 12678 13029 52071;52072 52072 SVTHFDSLAVIDIPGADTLDK 21 1 0 Unmodified _SVTHFDSLAVIDIPGADTLDK_ 0 0 0 Q8TAF6;O60488;B4DH39;D6RF95;D6RFW9;D6RDA8;D6RD96 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.049 3 738.714469 2213.12158 71579.61 0.96988 0.00071646 -0.21322 -0.00015751 0.75665 0.00055895 739.048719101145 741.71992322874 115.65 0.55699 115.65 115.37 115.93 0 202 35 9 0 0 0 2.2566E-05 2 75495 41.136 41.136 1 2.1322 2.1448 0 27526000 8659200 18867000 33426 1394 12678 13029 52073;52074 52074 SVTHFDSLAVIDIPGADTLDK 21 1 0 Unmodified _SVTHFDSLAVIDIPGADTLDK_ 0 0 0 Q8TAF6;O60488;B4DH39;D6RF95;D6RFW9;D6RDA8;D6RD96 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 741.3864 3 738.714469 2213.12158 70449.04 0.64224 0.00047443 0.27925 0.00020629 0.92149 0.00068072 739.049095996876 741.720091208364 127.31 0.56371 127.31 127.06 127.62 7.6294E-06 104 22 8 0 0 0 0.0064919 2 76624 22.936 22.936 1 1.0037 0.8045 0 7434900 3787800 3647100 33427 1394 12678 13029 52075;52076 52075 SVTHFDSLAVIDIPGADTLDK 21 1 0 Unmodified _SVTHFDSLAVIDIPGADTLDK_ 0 0 0 Q8TAF6;O60488;B4DH39;D6RF95;D6RFW9;D6RDA8;D6RD96 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.715 3 738.714469 2213.12158 69832.87 0.74296 0.00054883 0.35402 0.00026152 1.097 0.00081035 739.049118178347 741.720382579499 127.12 0.47762 127.12 126.81 127.28 0 69 21 6 0 0 0 0.015526 2 75662 20.256 16.524 1 1.1519 0.92097 0 4142000 2116300 2025700 33428 1394 12678 13029 52077;52078 52078 SVTLGYLFSQGHLTR 15 0 1 Unmodified _SVTLGYLFSQGHLTR_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.9533 2 839.949204 1677.88385 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.77 1 100.77 100.27 101.27 -7.6294E-06 0 0 0 0.0013917 1 61824 72.34 57.779 1 33429 5 12679 13030 52079 52079 SVTVPEAENPR 11 0 1 Unmodified _SVTVPEAENPR_ 0 0 0 B4DLG2;O75152;B4DYM8;A0A1B0GTU1;A0A024R8H9;A0A1B0GUI2 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8084 2 599.806759 1197.59897 81003.85 0.59606 0.00035752 -0.079874 -4.7909E-05 0.51618 0.00030961 599.806798769794 604.810659629942 37.735 0.41767 37.735 37.491 37.908 0 104 34 4 0 0 0 0.0017252 2 19228 65.305 61.559 1 1.8607 1.9571 0 11334000 3242200 8092000 33430 996 12680 13031 52080;52081 52080 SVTVPEAENPR 11 0 1 Unmodified _SVTVPEAENPR_ 0 0 0 B4DLG2;O75152;B4DYM8;A0A1B0GTU1;A0A024R8H9;A0A1B0GUI2 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.8112 2 599.806759 1197.59897 79823.2 0.45791 0.00027466 0.19379 0.00011624 0.6517 0.00039089 599.806839560127 604.810721298078 36.833 0.32953 36.833 36.643 36.972 0 83 22 5 0 0 0 0.00033438 1 18994 86.624 76.101 1 1.3033 1.3652 0 22752000 9194500 13558000 33431 996 12680 13031 52082 52082 SVVAPPGAPK 10 1 0 Unmodified _SVVAPPGAPK_ 0 0 0 H3BR35;Q7KZX8;B2RCT6;A8K2W7;P15170;H3BSV8 H3BR35 H3BR35 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.7719 2 461.77146 921.528367 93028.49 0.48364 0.00022333 -0.069508 -3.2097E-05 0.41413 0.00019123 461.771414677156 465.778429194829 35.832 0.58534 35.832 35.491 36.076 0 192 56 5 0 0 0 0.0041076 2 18022 61.962 61.962 1 3.65 3.9898 0 51257000 12389000 38868000 33432 715 12681 13032 52083;52084 52083 SVVAPPGAPK 10 1 0 Unmodified _SVVAPPGAPK_ 0 0 0 H3BR35;Q7KZX8;B2RCT6;A8K2W7;P15170;H3BSV8 H3BR35 H3BR35 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.779 2 461.77146 921.528367 91255.11 0.41747 0.00019277 0.011507 5.3137E-06 0.42897 0.00019809 461.771532670264 465.778420476054 34.963 0.55526 34.963 34.677 35.232 0 195 47 5 0 0 0 0.0048813 3 17662 60.91 60.91 1 3.8269 4.1921 0 40842000 8418000 32424000 33433 715 12681 13032 52085;52086;52087 52085 SVVCSDVEQQVIVIEEEKK 19 2 0 Unmodified _SVVCSDVEQQVIVIEEEKK_ 0 0 1 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.3817 3 740.047231 2217.11986 70250.47 0.72877 0.00053932 0.89506 0.00066239 1.6238 0.0012017 740.048256678795 745.724244370127 104.46 0.41091 104.46 104.28 104.69 -7.6294E-06 88 24 6 0 0 0 0.040079 2 59491 12.303 7.6501 1 0.58387 0.51212 0 2822400 1679900 1142500 33434 511 12682 13033 52088;52089 52089 SVVGNLHR 8 0 1 Unmodified _SVVGNLHR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.251 2 441.251226 880.487899 NaN NaN NaN 0.26167 0.00011546 NaN NaN NaN NaN 22.206 0.71037 22.206 22.023 22.733 0 0 0 0 0.0035834 1 8345 94.163 54.5 1 NaN NaN 0 97009000 97009000 0 33435 1570 12683 13034 52090 52090 SVVGNLHR 8 0 1 Unmodified _SVVGNLHR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 446.2552 2 441.251226 880.487899 89915.55 -0.052718 -2.3262E-05 -0.0099648 -4.397E-06 -0.062683 -2.7659E-05 441.251159247072 446.255209401434 24.008 1.4362 24.008 23.762 25.198 0 256 79 9 0 0 0 0.039038 2 8310 47.743 17.558 1 1.1225 0.95256 0 33035000 15631000 17404000 33436 1570 12683 13034 52091;52092 52091 SVVGNLHR 8 0 1 Unmodified _SVVGNLHR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 441.251 2 441.251226 880.487899 90690.54 -0.024218 -1.0686E-05 -0.13413 -5.9186E-05 -0.15835 -6.9872E-05 441.251081282939 446.255145042826 23.856 0.92457 23.856 23.542 24.466 0 258 55 9 0 0 0 0.01271 2 7719 66.993 26.89 1 1.1259 0.97471 0 23402000 10453000 12949000 33437 1570 12683 13034 52093;52094 52093 SVVLQLADGQIFK 13 1 0 Unmodified _SVVLQLADGQIFK_ 0 0 0 Q8N516;Q4LE38;O95163;F5H2T0;B3KXE7;B4E3I9;Q68DI5 Q8N516 Q8N516 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.4057 2 709.406109 1416.79767 74215.3 0.86475 0.00061346 0.15136 0.00010737 1.0161 0.00072084 709.907856097904 713.413156811093 113.04 0.49342 113.04 112.75 113.24 0 87 34 4 0 0 0 0.0012244 2 71468 58.699 58.699 1 1.5608 1.5818 0 5835400 2269100 3566400 33438 1419 12684 13035 52095;52096 52095 SVVLQLADGQIFK 13 1 0 Unmodified _SVVLQLADGQIFK_ 0 0 0 Q8N516;Q4LE38;O95163;F5H2T0;B3KXE7;B4E3I9;Q68DI5 Q8N516 Q8N516 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.4066 2 709.406109 1416.79767 74520.33 0.73305 0.00052003 -0.077387 -5.4899E-05 0.65566 0.00046513 709.907755930903 713.413037014583 112.39 0.45432 112.39 112.19 112.64 -7.6294E-06 93 33 4 0 0 0 0.00011321 1 72740 75.229 75.229 1 1.5039 1.5152 0 7336800 3338300 3998500 33439 1419 12684 13035 52097 52097 SVVSDLEADDVK 12 1 0 Unmodified _SVVSDLEADDVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8177 2 638.81699 1275.61943 74791.72 0.32463 0.00020738 0.12787 8.1687E-05 0.4525 0.00028906 638.817301553226 642.824069842221 69.75 2.0467 69.75 69.254 71.301 -7.6294E-06 914 174 12 0 0 0 3.1542E-13 5 40427 135.86 135.86 1 0.7486 0.91225 0 2842500000 1610300000 1232200000 33440 1471 12685 13036 52098;52099;52100;52101;52102 52099 SVVSDLEADDVK 12 1 0 Unmodified _SVVSDLEADDVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.818 2 638.81699 1275.61943 NaN NaN NaN 0.48587 0.00031038 NaN NaN NaN NaN 59.368 0.20195 59.368 59.275 59.476 0 0 0 0 0.0053565 1 33785 62.303 41.401 1 NaN NaN 0 5263900 5263900 0 33441 1471 12685 13036 52103 52103 SVVSDLEADDVK 12 1 0 Unmodified _SVVSDLEADDVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8248 2 638.81699 1275.61943 74802.22 0.58683 0.00037488 0.020474 1.3079E-05 0.6073 0.00038796 638.817224376903 642.823992851835 68.485 1.8997 68.485 68.188 70.087 0 868 157 14 0 0 0 4.0625E-08 6 40604 116.23 116.23 1 0.7472 0.88454 0 2320000000 1262500000 1057500000 33442 1471 12685 13036 52104;52105;52106;52107;52108;52109 52104 SVVSDLEADDVK 12 1 0 Unmodified _SVVSDLEADDVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.8258 2 638.81699 1275.61943 78273.27 0.48548 0.00031013 0.28915 0.00018472 0.77463 0.00049485 638.817325170839 642.824515095506 68.703 0.36206 68.703 68.53 68.892 0 90 27 5 0 0 0 0.017721 1 35889 41.283 36.124 1 1.506 1.2768 0 1473100 709300 763770 33443 1471 12685 13036 52110 52110 SVVSDLEADDVK 12 1 0 Unmodified _SVVSDLEADDVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 638.8173 2 638.81699 1275.61943 75369.09 0.40668 0.00025979 -0.14259 -9.1091E-05 0.26408 0.0001687 638.817318524887 642.823991692459 80.256 2.2742 80.256 79.897 82.172 0 779 145 12 0 0 0 0.00023548 4 43306 85.958 85.958 1 1.4054 1.2581 0 509450000 199520000 309920000 33444 1471 12685 13036 52111;52112;52113;52114 52111 SVVSDLEADDVK 12 1 0 Unmodified _SVVSDLEADDVK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.8171 2 638.81699 1275.61943 75282.45 0.60797 0.00038838 -0.30135 -0.00019251 0.30662 0.00019587 638.817158353166 642.823862651011 80.638 2.2701 80.638 80.29 82.56 0 809 139 12 0 0 0 1.2512E-06 3 42655 112.13 112.13 1 1.3667 1.1953 0 475810000 201890000 273920000 33445 1471 12685 13036 52115;52116;52117 52115 SVVTAPIIK 9 1 0 Unmodified _SVVTAPIIK_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2976 2 464.29731 926.580068 94108.28 0.31329 0.00014546 -0.25626 -0.00011898 0.057027 2.6478E-05 464.297217600584 468.304249551003 66.318 0.54949 66.318 66.075 66.625 0 105 43 4 0 0 0 0.035569 1 39100 43.808 36.24 1 0.76077 0.77227 0 9111800 5342500 3769400 33446 135 12686 13037 52118 52118 SVVTSIFGVK 10 1 0 Unmodified _SVVTSIFGVK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.8146 2 518.8055 1035.59645 84667.4 0.64601 0.00033515 0.0045393 2.355E-06 0.65055 0.00033751 518.805288948783 522.812552383459 98.841 0.80177 98.841 98.449 99.251 7.6294E-06 195 66 4 0 0 0 0.00035656 1 60318 88.948 56.107 1 1.8188 1.9163 0 16403000 5963000 10440000 33447 1561 12687 13038 52119 52119 SVVTSIFGVK 10 1 0 Unmodified _SVVTSIFGVK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.8125 2 518.8055 1035.59645 84859.47 0.38322 0.00019882 0.27984 0.00014518 0.66306 0.000344 518.80553996431 522.812676883913 98.009 0.86127 98.009 97.481 98.342 0 230 71 4 0 0 0 0.0020368 1 61084 70.919 45.996 1 1.7957 1.8694 0 24522000 7720000 16801000 33448 1561 12687 13038 52120 52120 SVVTSIFGVK 10 1 0 Unmodified _SVVTSIFGVK_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.8129 2 518.8055 1035.59645 94015.51 0.61061 0.00031679 0.53851 0.00027938 1.1491 0.00059617 518.805660183694 522.812777425587 111.74 0.47107 111.74 111.5 111.97 0 84 27 5 0 0 0 0.058457 1 64769 35.152 17.912 1 0.86621 0.70968 0 2591100 1423600 1167500 33449 1561 12687 13038 52121 52121 SVVTVIDVFYK 11 1 0 Unmodified _SVVTVIDVFYK_ 0 0 0 CON__Q5D862;Q5D862 CON__Q5D862 CON__Q5D862 FLG2 Filaggrin-2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.3588 2 635.358096 1268.70164 NaN NaN NaN 0.070438 4.4753E-05 NaN NaN NaN NaN 129.4 0.53059 129.4 129.14 129.67 0 0 0 0 0.0030546 1 78291 68.657 56.809 1 NaN NaN 0 1416200 1416200 0 + 33450 1174 12688 13039 52122 52122 SVYAHFPINVVIQENGSLVEIR 22 0 1 Unmodified _SVYAHFPINVVIQENGSLVEIR_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.1155 3 828.779696 2483.31726 NaN NaN NaN -0.78548 -0.00065099 NaN NaN NaN NaN 123.09 0.10847 123.09 123.05 123.16 7.6294E-06 0 0 0 0.042833 1 79792 23.296 19.856 1 NaN NaN 0 1653300 1653300 0 33451 1537 12689 13040 52123 52123 SVYAHFPINVVIQENGSLVEIR 22 0 1 Unmodified _SVYAHFPINVVIQENGSLVEIR_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.1157 3 828.779696 2483.31726 65678.38 0.8009 0.00066377 0.47783 0.00039601 1.2787 0.0010598 829.114285503461 832.784198078644 120.98 0.19389 120.98 120.89 121.09 0 53 10 7 0 0 0 8.1255E-09 1 80038 72.99 72.99 1 0.73136 0.83888 0 81335000 52536000 28799000 33452 1537 12689 13040 52124 52124 SVYAHFPINVVIQENGSLVEIR 22 0 1 Unmodified _SVYAHFPINVVIQENGSLVEIR_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.4475 3 828.779696 2483.31726 NaN NaN NaN -1.748 -0.0014487 NaN NaN NaN NaN 122.18 0.25388 122.18 122.06 122.32 0 0 0 0 4.6885E-05 1 81001 50.539 43.769 1 NaN NaN 0 2591500 2591500 0 33453 1537 12689 13040 52125 52125 SVYAHFPINVVIQENGSLVEIR 22 0 1 Unmodified _SVYAHFPINVVIQENGSLVEIR_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.7799 3 828.779696 2483.31726 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.01 1 122.01 121.51 122.51 0 0 0 0 0.0085557 1 80874 45.395 38.119 1 33454 1537 12689 13040 52126 52126 SVYAHFPINVVIQENGSLVEIR 22 0 1 Unmodified _SVYAHFPINVVIQENGSLVEIR_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.4208 3 828.779696 2483.31726 64471.11 0.90086 0.00074662 -1.607 -0.0013319 -0.70618 -0.00058527 829.111962390859 832.448804744325 121.82 0.45858 121.82 121.67 122.13 7.6294E-06 68 31 4 0 0 0 0.01126 1 80728 31.27 23.558 1 0.71166 0.71847 0 10216000 5022000 5193900 33455 1537 12689 13040 52127 52127 SVYAHFPINVVIQENGSLVEIR 22 0 1 Unmodified _SVYAHFPINVVIQENGSLVEIR_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 832.451 3 828.779696 2483.31726 66297.54 0.96308 0.00079818 -0.43976 -0.00036447 0.52332 0.00043371 829.113406810134 832.449832596977 131.92 0.59698 131.92 131.7 132.29 0 207 27 12 0 0 0 1.897E-07 3 80105 52.754 48.592 1 1.0435 0.88852 0 35672000 17926000 17746000 33456 1537 12689 13040 52128;52129;52130 52129 SVYAHFPINVVIQENGSLVEIR 22 0 1 Unmodified _SVYAHFPINVVIQENGSLVEIR_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.114 3 828.779696 2483.31726 66392.88 1.1177 0.00092633 1.362 0.0011288 2.4797 0.0020551 829.115042442511 832.45113681953 131.61 0.64905 131.61 131.34 131.99 0 112 24 9 0 0 0 1.4226E-16 2 79015 109.37 109.37 1 0.97999 0.85487 0 43412000 21620000 21792000 33457 1537 12689 13040 52131;52132 52131 SWADVVK 7 1 0 Unmodified _SWADVVK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 402.7162 2 402.716153 803.417754 94204.04 0.056121 2.2601E-05 0.28395 0.00011435 0.34007 0.00013695 402.716183334159 406.723259489485 57.678 0.96115 57.678 57.353 58.314 0 332 76 6 0 0 0 0.03421 1 32564 62.717 39.698 1 1.4818 1.6725 0 79388000 28385000 51002000 33458 1569;1864 12690 13041 52133 52133 SWITIPR 7 0 1 Unmodified _SWITIPR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.2551 2 436.75307 871.491587 93477.91 0.47524 0.00020756 -0.73781 -0.00032224 -0.26257 -0.00011468 436.752506351311 441.756710983081 85.128 0.34305 85.128 84.981 85.324 0 83 29 4 0 0 0 0.034211 1 52363 62.714 32.873 1 0.51173 0.50851 0 8585400 4972500 3612900 33459 1681 12691 13042 52134 52134 SWLLPVIR 8 0 1 Unmodified _SWLLPVIR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.3052 2 492.30547 982.596387 87489.95 0.49882 0.00024557 -0.00048986 -2.4116E-07 0.49833 0.00024533 492.305385430801 497.309484182841 116.52 0.72202 116.52 116.14 116.86 0 218 49 6 0 0 0 0.014565 2 74221 62.714 58.697 1 1.0996 1.1387 0 20438000 10107000 10331000 33460 907 12692 13043 52135;52136 52136 SWLLPVIR 8 0 1 Unmodified _SWLLPVIR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 492.3056 2 492.30547 982.596387 88570.09 0.57459 0.00028287 -0.098364 -4.8425E-05 0.47622 0.00023445 492.305288933583 497.30940777604 115.86 0.78019 115.86 115.41 116.19 0 208 50 6 0 0 0 0.012692 2 75480 67.035 61.274 1 1.0762 1.1432 0 24094000 13175000 10920000 33461 907 12692 13043 52137;52138 52138 SWLLPVIR 8 0 1 Unmodified _SWLLPVIR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.8071 2 492.30547 982.596387 85872 0.37004 0.00018217 0.19394 9.5476E-05 0.56398 0.00027765 492.305462017646 497.309624193319 127.76 0.53389 127.76 127.47 128.01 7.6294E-06 88 21 6 0 0 0 0.059997 2 76073 40.103 40.103 1 1.1747 1.0381 0 3680700 1763700 1917000 33462 907 12692 13043 52139;52140 52139 SWNDCLNK 8 1 0 Unmodified _SWNDCLNK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.7367 2 518.729466 1035.44438 83950.81 0.5486 0.00028458 -0.036809 -1.9094E-05 0.51179 0.00026548 518.729465801927 522.736580070212 36.948 0.7032 36.948 36.633 37.336 0 311 63 6 0 0 0 0.022432 1 18638 57.177 54.579 1 0.6 0.64887 0 42932000 25722000 17210000 33463 2148 12693 13044 52141 52141 SWNDCLNK 8 1 0 Unmodified _SWNDCLNK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.7299 2 518.729466 1035.44438 83788.54 0.55052 0.00028557 -0.44243 -0.0002295 0.10809 5.6071E-05 518.729300993916 522.736335564537 36.119 1.0615 36.119 35.452 36.514 0 359 90 7 0 0 0 0.0077612 2 18434 81.548 71.637 1 0.62188 0.68694 0 44546000 25691000 18855000 33464 2148 12693 13044 52142;52143 52143 SWNDCLNK 8 1 0 Unmodified _SWNDCLNK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.7296 2 518.729466 1035.44438 82360.88 0.22967 0.00011914 0.15068 7.8162E-05 0.38035 0.0001973 518.729423664016 522.736560395658 42.061 0.94161 42.061 41.774 42.715 0 326 70 8 0 0 0 0.026353 1 19563 54.611 52.013 1 0.95409 0.75378 0 10641000 5051300 5590100 33465 2148 12693 13044 52144 52144 SWNDCLNK 8 1 0 Unmodified _SWNDCLNK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 518.7292 2 518.729466 1035.44438 83553.49 -0.024501 -1.2709E-05 0.34194 0.00017737 0.31744 0.00016466 518.729550189386 522.736715313454 42.256 0.8655 42.256 41.922 42.788 -3.8147E-06 341 62 8 0 0 0 0.054005 1 19110 42.287 40.504 1 1.0076 0.8284 0 9902500 5204300 4698200 33466 2148 12693 13044 52145 52145 SWPAAIPHLR 10 0 1 Unmodified _SWPAAIPHLR_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 383.2169 3 383.217214 1146.62981 99910.38 0.421 0.00016134 -0.37002 -0.0001418 0.050983 1.9537E-05 383.217088945353 386.55314288624 80.303 0.44182 80.303 80.109 80.551 0 113 36 5 0 0 0 0.0095443 1 47719 42.395 42.395 1 0.94665 0.97975 0 5990400 2977600 3012800 33467 2143 12694 13045 52146 52146 SWPAAIPHLR 10 0 1 Unmodified _SWPAAIPHLR_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 383.2172 3 383.217214 1146.62981 NaN NaN NaN -0.45245 -0.00017339 NaN NaN NaN NaN 78.601 0.46731 78.601 78.39 78.857 -7.6294E-06 0 0 0 0.030005 1 47583 38.75 38.75 1 NaN NaN 0 4236400 4236400 0 33468 2143 12694 13045 52147 52147 SWPQESNLNR 10 0 1 Unmodified _SWPQESNLNR_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.8019 2 615.796726 1229.5789 78847.77 0.41018 0.00025259 0.28604 0.00017614 0.69623 0.00042873 615.796952881176 620.800851548281 42.177 0.60393 42.177 41.809 42.413 0 144 54 4 0 0 0 0.00097865 1 22640 78.149 72.368 1 0.7794 0.7655 0 14166000 6624200 7542000 33469 1565 12695 13046 52148 52148 SWPQESNLNRK 11 1 1 Unmodified _SWPQESNLNRK_ 0 0 1 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.5652 3 453.56523 1357.67386 91056.97 0.44313 0.00020099 0.29065 0.00013183 0.73378 0.00033282 453.565000149616 459.907628503644 28.714 0.27095 28.714 28.612 28.883 -1.9073E-06 43 14 5 0 0 0 0.0015339 1 13693 54.471 42.888 1 1.0844 1.1654 0 11775000 5032000 6743300 33470 1565 12696 13047 52149 52149 SWPQESNLNRK 11 1 1 Unmodified _SWPQESNLNRK_ 0 0 1 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.2387 3 453.56523 1357.67386 88484.9 0.079614 3.611E-05 -0.2852 -0.00012936 -0.20558 -9.3245E-05 453.565197827776 459.572337312367 27.943 0.3119 27.943 27.818 28.13 0 53 17 5 0 0 0 0.01919 1 13206 28.903 16.521 1 0.61886 0.69364 0 12449000 5483600 6965800 33471 1565 12696 13047 52150 52150 SWQDELAQQAEEGSAR 16 0 1 Unmodified _SWQDELAQQAEEGSAR_ 0 0 0 A0A024R9D2;Q86UE4 A0A024R9D2 A0A024R9D2 MTDH Protein LYRIC MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 902.9087 2 902.908461 1803.80237 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.69 1 79.69 79.19 80.19 7.6294E-06 0 0 0 0.05165 1 47294 38.189 29 1 33472 275 12697 13048 52151 52151 SWQDELAQQAEEGSAR 16 0 1 Unmodified _SWQDELAQQAEEGSAR_ 0 0 0 A0A024R9D2;Q86UE4 A0A024R9D2 A0A024R9D2 MTDH Protein LYRIC MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.9105 2 902.908461 1803.80237 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.56 1 78.56 78.06 79.06 0 0 0 0 0.00023416 1 47650 81.431 71.744 1 33473 275 12697 13048 52152 52152 SWQDELAQQAEEGSAR 16 0 1 Unmodified _SWQDELAQQAEEGSAR_ 0 0 0 A0A024R9D2;Q86UE4 A0A024R9D2 A0A024R9D2 MTDH Protein LYRIC MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.9081 2 902.908461 1803.80237 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.69 1 78.69 78.19 79.19 0 0 0 0 0.00099116 1 47745 67.456 60.568 1 33474 275 12697 13048 52153 52153 SWSNIPFITVPLSR 14 0 1 Unmodified _SWSNIPFITVPLSR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.9479 2 808.94339 1615.87223 68387.07 0.89317 0.00072252 -0.067185 -5.4349E-05 0.82598 0.00066817 809.445948763027 813.947629153894 127.85 0.47115 127.85 127.65 128.12 -7.6294E-06 77 28 5 0 0 0 0.00012949 2 83299 80.245 80.245 1 1.8451 1.9429 0 4142300 1708400 2433900 33475 1611 12698 13049 52154;52155 52154 SWSNIPFITVPLSR 14 0 1 Unmodified _SWSNIPFITVPLSR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.9444 2 808.94339 1615.87223 75086.42 0.77641 0.00062807 -0.169 -0.00013671 0.6074 0.00049136 808.943811413461 813.947570000499 127.49 0.36121 127.49 127.24 127.6 0 68 21 5 0 0 0 0.00023444 2 85136 64.439 64.439 1 1.9449 2.058 0 3871400 1217100 2654300 33476 1611 12698 13049 52156;52157 52157 SWSVPVIR 8 0 1 Unmodified _SWSVPVIR_ 0 0 0 Q9Y6K1;A0A0C4DG02;Q8WVA9;Q6PJ37;Q9UBC3;B3KM53 Q9Y6K1;Q9UBC3 Q9Y6K1 DNMT3A;DNMT3B DNA (cytosine-5)-methyltransferase 3A;DNA (cytosine-5)-methyltransferase 3B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.2745 2 472.271627 942.528701 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.438 1 88.438 87.938 88.938 0 0 0 0 0.01006 1 53319 76.847 48.74 1 33477 2153;2097 12699 13050 52158 52158 SWTAADTAAQLTQR 14 0 1 Unmodified _SWTAADTAAQLTQR_ 0 0 0 M9P9U0;A0A0A7C8J0;G1ENK8 M9P9U0 M9P9U0 HLA-C;HLA-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.8835 2 760.378611 1518.74267 NaN NaN NaN -1.3347 -0.0010149 NaN NaN NaN NaN 71.135 0.30576 71.135 71.004 71.31 0 0 0 0 0.0001854 1 41399 85.813 0 1 NaN NaN 0 5819200 5819200 0 33478 496 12700 13051 52159 52159 SYCAEIAHNVSSK 13 1 0 Unmodified _SYCAEIAHNVSSK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.3406 2 733.34064 1464.66673 69714.54 0.51894 0.00038056 -0.058848 -4.3156E-05 0.46009 0.00033741 733.340717392799 737.3478054962 32.815 0.83334 32.815 32.443 33.276 0 504 79 10 0 0 0 1.5941E-23 1 16178 154.36 154.36 1 0.83901 0.99321 0 437220000 241090000 196130000 33479 112 12701 13052 52160 52160 SYCAEIAHNVSSK 13 1 0 Unmodified _SYCAEIAHNVSSK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.23 3 489.229519 1464.66673 85444.99 0.070331 3.4408E-05 -0.070021 -3.4256E-05 0.00030987 1.516E-07 489.229511726328 491.900887291024 32.808 0.58908 32.808 32.501 33.091 0 341 56 8 0 0 0 0.00049283 2 16239 61.167 61.167 1 0.85396 0.96118 0 120450000 65659000 54796000 33480 112 12701 13052 52161;52162 52162 SYCAEIAHNVSSK 13 1 0 Unmodified _SYCAEIAHNVSSK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.3484 2 733.34064 1464.66673 69904.24 0.91875 0.00067376 -0.22516 -0.00016512 0.69359 0.00050864 733.340562466685 737.347649728068 31.82 0.79652 31.82 31.588 32.384 0 389 75 10 0 0 0 2.2474E-30 3 15732 170.4 170.4 1 0.81881 0.96182 0 352050000 192520000 159530000 33481 112 12701 13052 52163;52164;52165 52165 SYCAEIAHNVSSK 13 1 0 Unmodified _SYCAEIAHNVSSK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.2304 3 489.229519 1464.66673 85687.15 0.6034 0.0002952 -0.31749 -0.00015533 0.28591 0.00013988 489.229322610057 491.900817737275 31.831 0.47223 31.831 31.615 32.088 1.9073E-06 256 43 8 0 0 0 3.5416E-05 1 15746 64.394 64.394 1 0.87217 0.97663 0 110580000 55087000 55489000 33482 112 12701 13052 52166 52166 SYCAEIAHNVSSK 13 1 0 Unmodified _SYCAEIAHNVSSK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.3478 2 733.34064 1464.66673 69520.62 0.57744 0.00042346 -0.37236 -0.00027307 0.20508 0.0001504 733.34063178 737.347584978278 38.256 0.79395 38.256 38.001 38.795 0 416 59 12 0 0 0 0.0033238 3 17213 50.149 49.081 1 0.80089 0.69278 0 114360000 63824000 50537000 33483 112 12701 13052 52167;52168;52169 52167 SYCAEIAHNVSSK 13 1 0 Unmodified _SYCAEIAHNVSSK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 491.9005 3 489.229519 1464.66673 85206.84 0.17999 8.8055E-05 -0.14414 -7.0519E-05 0.035844 1.7536E-05 489.229521220105 491.900852351405 38.276 0.63882 38.276 37.965 38.604 0 311 48 10 0 0 0 0.00067908 2 17288 45.864 45.864 1 0.7776 0.63242 0 29808000 17004000 12804000 33484 112 12701 13052 52170;52171 52171 SYCAEIAHNVSSK 13 1 0 Unmodified _SYCAEIAHNVSSK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 737.3479 2 733.34064 1464.66673 70064.74 0.39529 0.00028989 -0.29311 -0.00021495 0.10218 7.4935E-05 733.3406922453 737.3476785039 38.423 0.86568 38.423 38.106 38.971 0 441 66 12 0 0 0 1.8373E-13 2 16860 130.1 122.45 1 0.73811 0.63006 0 100340000 58453000 41892000 33485 112 12701 13052 52172;52173 52173 SYCAEIAHNVSSK 13 1 0 Unmodified _SYCAEIAHNVSSK_ 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.2296 3 489.229519 1464.66673 85682.96 0.036791 1.7999E-05 -0.044043 -2.1547E-05 -0.0072517 -3.5477E-06 489.229603313068 491.900936758844 38.403 0.56286 38.403 38.142 38.705 0 299 42 10 0 0 0 0.0002415 2 16927 49.482 49.482 1 0.74441 0.59568 0 21368000 12714000 8653700 33486 112 12701 13052 52174;52175 52174 SYCCEHDLGAASVR 14 0 1 Unmodified _SYCCEHDLGAASVR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.5676 3 542.232935 1623.67697 82006.35 1.3231 0.00071741 -0.77223 -0.00041873 0.55083 0.00029868 542.56684516503 545.568785794502 33.189 0.32183 33.189 33.072 33.393 -3.8147E-06 113 30 6 0 0 0 4.7991E-05 2 16493 75.764 74.94 1 0.73737 0.76686 0 22073000 12314000 9759400 33487 1435 12702 13053 52176;52177 52177 SYCCEHDLGAASVR 14 0 1 Unmodified _SYCCEHDLGAASVR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.3478 2 812.845764 1623.67697 69607.12 0.66393 0.00053967 -0.28272 -0.00022981 0.38121 0.00030986 813.346634637834 817.850096699333 32.316 0.26172 32.316 32.158 32.419 0 67 24 6 0 0 0 0.0024454 1 16023 61.435 61.435 1 0.51902 0.52334 0 10501000 6368400 4132400 33488 1435 12702 13053 52178 52178 SYCCEHDLGAASVR 14 0 1 Unmodified _SYCCEHDLGAASVR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.5694 3 542.232935 1623.67697 80206.08 0.53567 0.00029046 -0.15967 -8.6576E-05 0.37601 0.00020388 542.232983251329 545.569088868901 38.513 0.42466 38.513 38.324 38.748 0 166 28 8 0 0 0 0.00087023 2 17448 48.177 47.278 1 1.6759 1.4023 0 10265000 3850500 6414700 33489 1435 12702 13053 52179;52180 52179 SYCCEHDLGAASVR 14 0 1 Unmodified _SYCCEHDLGAASVR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 818.3843 2 812.845764 1623.67697 67974.98 0.54997 0.00044704 0.19726 0.00016034 0.74722 0.00060738 813.347864598845 817.850340227528 38.536 0.35493 38.536 38.338 38.693 0 99 23 7 0 0 0 0.048857 1 17464 44.299 44.299 1 1.6858 1.4634 0 2177500 739510 1438000 33490 1435 12702 13053 52181 52181 SYCCEHDLGAASVR 14 0 1 Unmodified _SYCCEHDLGAASVR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.5688 3 542.232935 1623.67697 81727.93 0.30159 0.00016353 -0.13383 -7.2565E-05 0.16776 9.0966E-05 542.2329079021 545.569049154038 38.673 0.4187 38.673 38.477 38.896 0 193 32 9 0 0 0 0.00045115 1 17106 53.491 52.984 1 1.784 1.4772 0 7938800 3021600 4917100 33491 1435 12702 13053 52182 52182 SYCCEHDLGAASVR 14 0 1 Unmodified _SYCCEHDLGAASVR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 817.8504 2 812.845764 1623.67697 68573.55 0.39839 0.00032383 0.31079 0.00025262 0.70918 0.00057645 812.846930943792 817.850001600561 38.718 0.3158 38.718 38.524 38.84 0 104 24 6 0 0 0 0.030131 1 17116 41.242 41.051 1 1.856 1.607 0 2691000 852030 1839000 33492 1435 12702 13053 52183 52183 SYCSNLVR 8 0 1 Unmodified _SYCSNLVR_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.7398 2 499.739834 997.465115 86487.34 0.42699 0.00021338 -0.017175 -8.5829E-06 0.40981 0.0002048 499.739762747911 504.743759219825 33.68 0.88504 33.68 33.201 34.086 -3.8147E-06 255 85 4 0 0 0 0.0058564 1 16761 89.142 74.367 1 0.59734 0.6111 0 26340000 15883000 10457000 33493 2148 12703 13054 52184 52184 SYCSNLVR 8 0 1 Unmodified _SYCSNLVR_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 499.7405 2 499.739834 997.465115 83041.32 0.17928 8.9593E-05 0.61732 0.0003085 0.7966 0.00039809 499.740255141306 504.744011922776 38.713 1.0105 38.713 38.03 39.04 0 191 47 6 0 0 0 0.011407 2 17572 69.998 60.758 1 1.0081 0.82633 0 12660000 6350000 6310300 33494 2148 12703 13054 52185;52186 52186 SYCSNLVR 8 0 1 Unmodified _SYCSNLVR_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.744 2 499.739834 997.465115 84698.42 -0.070647 -3.5305E-05 0.83181 0.00041569 0.76117 0.00038039 499.740379827162 504.744057700837 38.803 0.72153 38.803 38.409 39.13 3.8147E-06 225 57 6 0 0 0 0.014589 2 17145 62.659 54.987 1 0.98734 0.80437 0 9613500 5024600 4588900 33495 2148 12703 13054 52187;52188 52188 SYDDAESLK 9 1 0 Unmodified _SYDDAESLK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 518.2396 2 514.232561 1026.45057 83822.22 0.18235 9.3773E-05 0.69778 0.00035882 0.88013 0.00045259 514.232524095055 518.239661187075 32.631 0.53584 32.631 32.333 32.869 0 130 25 8 0 0 0 0.015831 1 14050 54.416 51.099 1 1.0356 0.80853 0 16042000 7874400 8168100 33496 1679 12704 13055 52189 52189 SYDDAESLK 9 1 0 Unmodified _SYDDAESLK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.2326 2 514.232561 1026.45057 84871.83 0.27698 0.00014243 1.6305 0.00083846 1.9075 0.00098089 514.232598999806 518.239769655164 32.738 0.49972 32.738 32.44 32.939 0 80 22 6 0 0 0 0.04756 2 13762 39.01 34.611 1 1.0855 0.89054 0 8971300 3898000 5073300 33497 1679 12704 13055 52190;52191 52191 SYDSYEILGK 10 1 0 Unmodified _SYDSYEILGK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.7853 2 587.784961 1173.55537 79426.34 0.52342 0.00030766 -0.23037 -0.00013541 0.29306 0.00017225 587.784569202024 591.792033964389 81.516 0.6984 81.516 81.156 81.855 -7.6294E-06 208 41 8 0 0 0 0.031219 1 44146 42.311 42.311 1 1.2948 1.0257 0 4894900 2081000 2813900 33498 1412 12705 13056 52192 52192 SYDSYEILGK 10 1 0 Unmodified _SYDSYEILGK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 591.7922 2 587.784961 1173.55537 79517.59 0.51509 0.00030276 0.44415 0.00026107 0.95924 0.00056383 587.784884218031 591.792211138367 81.73 0.76222 81.73 81.382 82.144 7.6294E-06 179 41 7 0 0 0 0.011471 1 43477 51.949 43.729 1 1.3026 1.0665 0 5436600 2074500 3362000 33499 1412 12705 13056 52193 52193 SYEALVQHVIEDHER 15 0 1 Unmodified _SYEALVQHVIEDHER_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.3038 3 608.967352 1823.88023 78782.55 0.51662 0.00031461 -0.086551 -5.2707E-05 0.43007 0.0002619 609.3011563437 612.303392003001 97.722 0.58136 97.722 97.493 98.074 0 231 40 8 0 0 0 6.3007E-05 1 55008 76.151 72.546 1 1.603 1.3258 0 11328000 4205100 7122600 33500 878 12706 13057 52194 52194 SYEALVQHVIEDHER 15 0 1 Unmodified _SYEALVQHVIEDHER_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.3041 3 608.967352 1823.88023 79076.48 0.35181 0.00021424 0.0088726 5.4031E-06 0.36068 0.00021964 609.301728442073 612.30347766255 97.461 0.54765 97.461 97.247 97.794 0 176 29 8 0 0 0 5.7206E-08 1 53998 108.89 103.05 1 1.7417 1.4201 0 12734000 4843700 7890500 33501 878 12706 13057 52195 52195 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.953 2 895.949598 1789.88464 65616.31 1.1976 0.001073 0.073551 6.5898E-05 1.2711 0.0011389 895.949392445196 901.456132873722 96.047 0.48012 96.047 95.764 96.244 0 130 42 6 0 0 0 0.00015117 1 58389 62.924 62.924 1 1.6359 1.6919 0 13851000 5437200 8413900 33502 1624;1656;1100;2186 12707 13058 52196 52196 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.9548 2 895.949598 1789.88464 65369.56 0.69359 0.00062142 -0.51605 -0.00046236 0.17754 0.00015906 896.450684447225 900.95315147084 97.438 0.76383 97.438 97.023 97.787 -7.6294E-06 379 67 8 0 0 0 0.0001517 2 59191 72.089 72.089 1 3.6763 4.0949 0 81264000 23490000 57774000 33503 1624;1656;1100;2186 12707 13058 52197;52198 52197 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.9503 2 895.949598 1789.88464 64045.06 0.92539 0.0008291 -0.4027 -0.0003608 0.52269 0.0004683 895.95034251669 900.953661083536 100.98 2.0273 100.98 100.48 102.51 0 1141 156 14 0 0 0 1.3674E-24 4 62263 141.13 141.13 1 1.7326 2.0705 0 5036200000 1870800000 3165400000 33504 1624;1656;1100;2186 12707 13058 52199;52200;52201;52202 52202 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.4564 2 895.949598 1789.88464 64454.36 1.0263 0.00091951 -0.081094 -7.2657E-05 0.9452 0.00084685 896.450575969205 900.95363230194 95.428 0.4342 95.428 95.189 95.623 0 108 36 5 0 0 0 0.0020707 1 59280 42.475 42.475 1 1.7209 1.7243 0 11329000 4363600 6965400 33505 1624;1656;1100;2186 12707 13058 52203 52203 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.954 2 895.949598 1789.88464 65127.77 0.85877 0.00076941 -0.70888 -0.00063512 0.14989 0.00013429 896.450243955323 900.952898956875 96.759 0.79338 96.759 96.383 97.176 0 378 65 8 0 0 0 3.8559E-07 1 60448 98.902 90.797 1 3.3385 3.8204 0 86489000 25918000 60572000 33506 1624;1656;1100;2186 12707 13058 52204 52204 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.954 2 895.949598 1789.88464 64176.77 0.6558 0.00058757 -0.17477 -0.00015659 0.48103 0.00043098 895.950471058542 900.953829336817 100.29 1.871 100.29 99.796 101.67 0 1184 149 14 0 0 0 8.9853E-18 6 63295 133.71 133.71 1 1.8015 2.1699 0 6686100000 2444700000 4241400000 33507 1624;1656;1100;2186 12707 13058 52205;52206;52207;52208;52209;52210 52207 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.9539 2 895.949598 1789.88464 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.11 1 103.11 102.61 103.61 0 0 0 0 0.00030333 1 65183 80.469 62.66 1 33508 1624;1656;1100;2186 12707 13058 52211 52211 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 900.9538 2 895.949598 1789.88464 65302.97 0.57056 0.00051119 0.37977 0.00034025 0.95032 0.00085144 895.950383033102 900.953795770342 109.07 0.32423 109.07 108.88 109.2 -7.6294E-06 51 15 5 0 0 0 0.0019975 1 62725 42.789 42.789 1 1.8091 1.5141 0 3192100 1550100 1642000 33509 1624;1656;1100;2186 12707 13058 52212 52212 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 900.9546 2 895.949598 1789.88464 62866.5 0.57962 0.00051931 0.17799 0.00015947 0.75761 0.00067878 896.45086884716 900.953703762156 110.26 0.72575 110.26 109.87 110.6 -7.6294E-06 195 36 10 0 0 0 2.5824E-06 1 63603 91.914 91.914 1 2.6239 2.2312 0 34578000 10077000 24501000 33510 1624;1656;1100;2186 12707 13058 52213 52213 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.4536 2 895.949598 1789.88464 64088.19 0.81389 0.0007292 -0.32454 -0.00029077 0.48935 0.00043843 895.950828035904 900.954240494022 113.28 2.5401 113.28 112.91 115.45 -7.6294E-06 618 117 15 0 0 0 1.0672E-06 5 65827 96.734 96.734 1 2.3487 2.0625 0 1370500000 411280000 959260000 33511 1624;1656;1100;2186 12707 13058 52214;52215;52216;52217;52218 52215 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 901.4554 2 895.949598 1789.88464 64640.5 0.39942 0.00035786 0.20845 0.00018676 0.60787 0.00054462 895.94932764157 900.953569932534 110.16 0.66777 110.16 109.82 110.49 0 205 36 9 0 0 0 2.5824E-06 2 62616 91.914 91.914 1 2.6074 2.2745 0 27582000 7029200 20553000 33512 1624;1656;1100;2186 12707 13058 52219;52220 52219 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 901.4566 2 895.949598 1789.88464 64332.06 0.30684 0.00027492 -0.047105 -4.2204E-05 0.25974 0.00023271 895.951053366572 900.954423832191 113.23 2.3715 113.23 112.89 115.26 0 665 110 14 0 0 0 1.4138E-06 6 64843 95.631 95.631 1 2.2043 1.9282 0 1239300000 378570000 860740000 33513 1624;1656;1100;2186 12707 13058 52221;52222;52223;52224;52225;52226 52221 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q13707;B4DUI8;Q562R1;B3KPP5;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;F1BXA6;A4UCT3;A5GZ75;Q9BYX7;P63261;B4E3A4;B4DVQ0;V9HVZ7 B7Z6P1;Q53GK6;P63261;V9HVZ7 P63261 ACTA2;ACTG2;ACTA1;ACTC1;ACTBL2;ACTB;PS1TP5BP1;ACTG1;POTEE;POTEF;POTEKP;HEL-176 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 900.9554 2 895.949598 1789.88464 NaN NaN NaN -0.075094 -6.7281E-05 NaN NaN NaN NaN 109.04 0.36192 109.04 108.85 109.21 7.6294E-06 0 0 0 0.011984 1 61794 45.915 40.07 1 NaN NaN 0 1505100 0 1505100 33514 1624;1656;1100;2186 12707 13058 52227 52227 SYESQIEVMAAEVAK 15 1 0 Oxidation (M) _SYESQIEVM(ox)AAEVAK_ SYESQIEVM(1)AAEVAK SYESQIEVM(145.09)AAEVAK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.9014 2 835.900728 1669.7869 65808.45 0.64234 0.00053693 -0.48677 -0.0004069 0.15556 0.00013003 835.900800942431 839.908023087465 83.196 0.65585 83.196 82.883 83.539 0 432 55 11 0 0 0 2.1071E-22 2 49663 145.09 145.09 1 1.1063 1.2442 0 71407000 32390000 39017000 33515 69 12708 13059 52228;52229 52229 42 SYESQIEVMAAEVAK 15 1 0 Oxidation (M) _SYESQIEVM(ox)AAEVAK_ SYESQIEVM(1)AAEVAK SYESQIEVM(158.42)AAEVAK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 840.4092 2 835.900728 1669.7869 66474.41 1.2858 0.0010748 -0.4314 -0.00036061 0.85439 0.00071419 835.900558705398 840.409053037662 84.318 0.72025 84.318 83.938 84.659 0 280 56 7 0 0 0 5.1844E-31 1 50341 158.42 158.42 1 1.0392 1.1718 0 76555000 35312000 41243000 33516 69 12708 13059 52230 52230 42 SYESQIEVMAAEVAK 15 1 0 Oxidation (M) _SYESQIEVM(ox)AAEVAK_ SYESQIEVM(1)AAEVAK SYESQIEVM(98.9)AAEVAK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.9003 2 835.900728 1669.7869 66522.24 0.65894 0.00055081 -0.53226 -0.00044492 0.12668 0.00010589 835.900720131162 839.907935903809 82.313 0.66635 82.313 81.957 82.624 0 402 58 9 0 0 0 1.0432E-06 3 50195 98.902 98.902 1 1.1089 1.2431 0 79628000 37386000 42242000 33517 69 12708 13059 52231;52232;52233 52233 42 SYESQIEVMAAEVAK 15 1 0 Oxidation (M) _SYESQIEVM(ox)AAEVAK_ SYESQIEVM(1)AAEVAK SYESQIEVM(169.89)AAEVAK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.9094 2 835.900728 1669.7869 66262.09 0.83976 0.00070195 -0.16066 -0.00013429 0.6791 0.00056766 835.900850282106 839.907886441607 83.378 0.85857 83.378 82.987 83.846 -7.6294E-06 345 65 6 0 0 0 6.3494E-39 1 50896 169.89 169.89 1 1.0786 1.2151 0 59236000 29257000 29980000 33518 69 12708 13059 52234 52234 42 SYESQIEVMAAEVAK 15 1 0 Oxidation (M) _SYESQIEVM(ox)AAEVAK_ SYESQIEVM(1)AAEVAK SYESQIEVM(87.83)AAEVAK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 836.4028 2 835.900728 1669.7869 65862.06 0.7546 0.00063077 -0.14555 -0.00012166 0.60905 0.0005091 835.900732625937 839.907752248047 96.313 0.64224 96.313 96.025 96.667 0 246 39 8 0 0 0 8.1684E-06 2 53953 87.831 87.831 1 1.1185 0.88803 0 10139000 5288400 4850600 33519 69 12708 13059 52235;52236 52236 42 SYESQIEVMAAEVAK 15 1 0 Oxidation (M) _SYESQIEVM(ox)AAEVAK_ SYESQIEVM(1)AAEVAK SYESQIEVM(101.72)AAEVAK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 839.9086 2 835.900728 1669.7869 67005.58 0.59875 0.0005005 -0.87377 -0.00073038 -0.27501 -0.00022988 835.899462089757 839.907534029423 97.658 0.79367 97.658 97.123 97.917 0 294 46 9 0 0 0 2.5995E-07 3 54929 101.72 101.72 1 1.322 1.0341 0 11776000 4454700 7321400 33520 69 12708 13059 52237;52238;52239 52238 42 SYESQIEVMAAEVAK 15 1 0 Oxidation (M) _SYESQIEVM(ox)AAEVAK_ SYESQIEVM(1)AAEVAK SYESQIEVM(66.5)AAEVAK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 839.9077 2 835.900728 1669.7869 65856.92 0.47388 0.00039612 -0.38695 -0.00032345 0.086929 7.2664E-05 835.900664234206 839.907548747154 96.384 0.67471 96.384 96.004 96.679 0 249 40 9 0 0 0 0.00010745 1 53147 66.498 66.498 1 1.1646 0.95732 0 9805800 4486000 5319900 33521 69 12708 13059 52240 52240 42 SYESQIEVMAAEVAK 15 1 0 Oxidation (M) _SYESQIEVM(ox)AAEVAK_ SYESQIEVM(1)AAEVAK SYESQIEVM(79.74)AAEVAK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 835.9001 2 835.900728 1669.7869 66912.72 0.53371 0.00044613 -0.61266 -0.00051212 -0.078947 -6.5992E-05 835.899863325111 839.907702244778 97.637 0.86609 97.637 97.02 97.886 0 267 47 10 0 0 0 7.0266E-05 2 54159 79.744 79.744 1 1.217 0.9773 0 14773000 6515000 8258000 33522 69 12708 13059 52241;52242 52242 42 SYESQIEVMAAEVAK 15 1 0 Oxidation (M) _SYESQIEVM(ox)AAEVAK_ SYESQIEVM(1)AAEVAK SYESQIEVM(46.48)AAEVAK 0 1 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 839.9082 2 835.900728 1669.7869 NaN NaN NaN -0.049701 -4.1545E-05 NaN NaN NaN NaN 121.69 0.50778 121.69 121.4 121.91 0 0 0 0 0.0047386 1 71517 46.481 40.378 1 NaN NaN 0 5226000 0 5226000 33523 69 12708 13059 52243 52243 42 SYESQIEVMAAEVAK 15 1 0 Unmodified _SYESQIEVMAAEVAK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.9039 2 827.90327 1653.79199 NaN NaN NaN 0.00047916 3.967E-07 NaN NaN NaN NaN 110.04 0.42041 110.04 109.76 110.18 0 0 0 0 0.0024206 1 69012 63.091 45.227 1 NaN NaN 0 3924200 3924200 0 33524 69 12708 13060 52244 52244 SYESQIEVMAAEVAK 15 1 0 Unmodified _SYESQIEVMAAEVAK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.9053 2 827.90327 1653.79199 NaN NaN NaN 0.015078 1.2483E-05 NaN NaN NaN NaN 109.39 0.25082 109.39 109.27 109.52 -7.6294E-06 0 0 0 3.067E-10 1 70201 106.49 88.628 1 NaN NaN 0 5081300 5081300 0 33525 69 12708 13060 52245 52245 SYESQIEVMAAEVAK 15 1 0 Unmodified _SYESQIEVMAAEVAK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.9112 2 827.90327 1653.79199 65990.24 0.91983 0.00076153 -0.4317 -0.00035741 0.48812 0.00040412 827.903113875403 831.910160957067 121.88 0.54427 121.88 121.64 122.18 7.6294E-06 180 27 9 0 0 0 1.3175E-06 2 72524 99.531 95.644 1 2.0647 1.6743 0 25643000 8590900 17053000 33526 69 12708 13060 52246;52247 52246 SYESQIEVMAAEVAK 15 1 0 Unmodified _SYESQIEVMAAEVAK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.9045 2 827.90327 1653.79199 66127.38 0.95371 0.00078958 -0.21095 -0.00017465 0.74275 0.00061493 827.903237406089 831.910210120633 121.73 0.52879 121.73 121.42 121.94 0 150 25 8 0 0 0 1.0184E-05 2 71516 92.856 92.856 1 2.0783 1.7123 0 29250000 9562100 19687000 33527 69 12708 13060 52248;52249 52249 SYETLVDFDNHLDDIR 16 0 1 Unmodified _SYETLVDFDNHLDDIR_ 0 0 0 M0R1B0;Q53Y03;O43402 M0R1B0 M0R1B0 EMC8;COX4NB ER membrane protein complex subunit 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.6411 3 651.305922 1950.89594 77626.61 1.1656 0.00075918 -0.63097 -0.00041096 0.53466 0.00034823 651.63995535015 654.976041677173 102.33 0.55019 102.33 102.11 102.66 -7.6294E-06 119 43 5 0 0 0 8.5871E-05 1 64549 63.682 56.452 1 0.88973 0.89717 0 10495000 6165000 4329800 33528 1355 12709 13061 52250 52250 SYGEEDIPFYSSSTGK 16 1 0 Unmodified _SYGEEDIPFYSSSTGK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.9006 2 883.891414 1765.76828 65679.88 0.7797 0.00068917 0.55724 0.00049254 1.3369 0.0011817 884.392439186173 888.401336230235 84.884 0.52693 84.884 84.646 85.173 0 149 43 5 0 0 0 1.2378E-08 2 51004 105.65 88.623 1 0.97169 1.0115 0 14921000 7772900 7147800 33529 1680 12710 13062 52251;52252 52252 SYGEEDIPFYSSSTGK 16 1 0 Unmodified _SYGEEDIPFYSSSTGK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.9 2 883.891414 1765.76828 63904.45 0.76083 0.00067249 -0.22522 -0.00019907 0.53561 0.00047343 884.392334633488 887.899200395399 84.037 0.66103 84.037 83.692 84.353 0 159 54 5 0 0 0 1.1923E-05 2 51679 86.772 69.747 1 0.86137 0.85985 0 14420000 7405200 7014500 33530 1680 12710 13062 52253;52254 52254 SYGEEDIPFYSSSTGK 16 1 0 Unmodified _SYGEEDIPFYSSSTGK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.3983 2 883.891414 1765.76828 63776.75 0.73915 0.00065332 -0.028159 -2.489E-05 0.71099 0.00062843 883.891642521478 887.898694051039 97.197 0.8879 97.197 96.605 97.493 -7.6294E-06 207 45 8 0 0 0 0.012186 2 54512 32.567 27.673 1 1.9816 1.587 0 8519300 3223600 5295700 33531 1680 12710 13062 52255;52256 52255 SYGEEDIPFYSSSTGK 16 1 0 Unmodified _SYGEEDIPFYSSSTGK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 887.8989 2 883.891414 1765.76828 63571.05 0.06698 5.9203E-05 0.15798 0.00013964 0.22496 0.00019884 884.392926915684 887.899045638419 97.17 0.86361 97.17 96.621 97.484 -7.6294E-06 195 40 8 0 0 0 0.001001 2 53719 47.062 40.821 1 2.136 1.7409 0 6618600 2102800 4515900 33532 1680 12710 13062 52257;52258 52257 SYGLGSEQR 9 0 1 Unmodified _SYGLGSEQR_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.7412 2 498.740888 995.467223 84617.7 0.13509 6.7373E-05 0.49408 0.00024642 0.62917 0.00031379 498.74097470003 503.745188202803 25.625 0.56645 25.625 25.274 25.84 0 122 31 6 0 0 0 0.00017767 2 11130 107.29 93.292 1 0.74128 0.78802 0 42773000 26236000 16537000 33533 878 12711 13063 52259;52260 52259 SYGLGSEQR 9 0 1 Unmodified _SYGLGSEQR_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.7411 2 498.740888 995.467223 86117.1 0.1275 6.3588E-05 0.43798 0.00021844 0.56548 0.00028203 498.740945326288 503.745037988609 25.344 0.50539 25.344 25.012 25.517 0 68 19 7 0 0 0 0.00068897 2 10940 95.741 76.959 1 0.71545 0.78312 0 33084000 19690000 13394000 33534 878 12711 13063 52261;52262 52261 SYGLGSEQR 9 0 1 Unmodified _SYGLGSEQR_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.741 2 498.740888 995.467223 86813.14 0.20484 0.00010216 0.45511 0.00022698 0.65995 0.00032914 498.741169239637 503.745121426468 28.595 0.39345 28.595 28.397 28.79 -1.9073E-06 83 22 6 0 0 0 0.015061 1 11453 55.112 50.421 1 1.7151 1.4759 0 7524500 2871000 4653400 33535 878 12711 13063 52263 52263 SYGPAPGAGHVQEESNLSLQALESR 25 0 1 Unmodified _SYGPAPGAGHVQEESNLSLQALESR_ 0 0 0 B2R7M3;A0A024QZY1;Q13155 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 866.7603 3 866.424529 2596.25176 65018.12 0.71396 0.00061859 -0.13587 -0.00011772 0.57809 0.00050087 866.758596971546 870.0951645562 85.973 0.70318 85.973 85.568 86.272 0 289 59 8 0 0 0 6.3738E-07 4 51521 48.374 48.374 1 1.399 1.4199 0 28964000 11574000 17390000 33536 32 12712 13064 52264;52265;52266;52267 52265 SYGPAPGAGHVQEESNLSLQALESR 25 0 1 Unmodified _SYGPAPGAGHVQEESNLSLQALESR_ 0 0 0 B2R7M3;A0A024QZY1;Q13155 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.4292 3 866.424529 2596.25176 65270.45 0.85656 0.00074215 -0.1323 -0.00011462 0.72427 0.00062752 866.758722385569 870.094907628479 84.908 0.6721 84.908 84.543 85.215 -7.6294E-06 307 57 9 0 0 0 1.8882E-21 3 52167 108.64 108.64 1 1.4729 1.6108 0 39532000 15011000 24520000 33537 32 12712 13064 52268;52269;52270 52269 SYGPAPGAGHVQEESNLSLQALESR 25 0 1 Unmodified _SYGPAPGAGHVQEESNLSLQALESR_ 0 0 0 B2R7M3;A0A024QZY1;Q13155 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 866.759 3 866.424529 2596.25176 64531.57 0.52919 0.00045851 0.13085 0.00011337 0.66005 0.00057188 866.758893809476 870.095649766873 98.9 0.57808 98.9 98.666 99.244 0 186 26 10 0 0 0 0.00027228 3 55767 33.835 33.835 1 0.8302 0.71193 0 8529700 4911800 3618000 33538 32 12712 13064 52271;52272;52273 52271 SYGPAPGAGHVQEESNLSLQALESR 25 0 1 Unmodified _SYGPAPGAGHVQEESNLSLQALESR_ 0 0 0 B2R7M3;A0A024QZY1;Q13155 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 869.7615 3 866.424529 2596.25176 64416.03 0.4208 0.00036459 0.44421 0.00038487 0.86501 0.00074946 866.759046615667 869.760737047152 98.745 0.61386 98.745 98.513 99.127 0 170 24 9 0 0 0 5.1217E-06 3 54829 40.104 40.104 1 0.95963 0.79509 0 7881100 3504000 4377200 33539 32 12712 13064 52274;52275;52276 52275 SYGRPPPDVEGMTSLK 16 1 1 Acetyl (Protein N-term),Oxidation (M) _(ac)SYGRPPPDVEGM(ox)TSLK_ SYGRPPPDVEGM(1)TSLK SYGRPPPDVEGM(62.89)TSLK 1 1 1 J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7 J3QL05 J3QL05 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 905.4445 2 896.432726 1790.8509 64439.52 0.71018 0.00063663 -0.30395 -0.00027247 0.40622 0.00036415 896.431973368379 905.443906898122 63.67 0.79623 63.67 63.269 64.065 3.8147E-06 381 78 6 0 0 0 3.7773E-05 1 36445 62.891 52.061 1 2.4649 2.9173 0 39740000 14013000 25727000 33540 258 12713 13065 52277 52277 193 SYGRPPPDVEGMTSLK 16 1 1 Acetyl (Protein N-term),Oxidation (M) _(ac)SYGRPPPDVEGM(ox)TSLK_ SYGRPPPDVEGM(1)TSLK SYGRPPPDVEGM(70.62)TSLK 1 1 1 J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7 J3QL05 J3QL05 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.4447 2 896.432726 1790.8509 64129.08 0.47007 0.00042138 -0.134 -0.00012012 0.33607 0.00030126 896.934330823914 905.444081045194 62.542 0.81051 62.542 62.184 62.995 0 348 75 6 0 0 0 3.8628E-05 1 36597 70.622 63.768 1 2.5645 2.987 0 43063000 11046000 32016000 33541 258 12713 13065 52278 52278 193 SYIDFEIEQEETER 14 0 1 Unmodified _SYIDFEIEQEETER_ 0 0 0 Q69YP1;Q5JY65;Q9BZJ0;Q8IXG0 Q69YP1 Q69YP1 DKFZp762M013;CRNKL1;crn Crooked neck-like protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.4061 2 894.402146 1786.78974 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.193 1 92.193 91.693 92.693 0 0 0 0 0.0024097 1 57111 63.408 53.721 1 33542 1810 12714 13066 52279 52279 SYLEFSEDSVQVPR 14 0 1 Unmodified _SYLEFSEDSVQVPR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.4034 2 828.399209 1654.78387 67327.38 0.76949 0.00063745 0.21252 0.00017605 0.98201 0.0008135 828.399307246889 833.403615381024 96.121 0.64824 96.121 95.869 96.517 0 276 56 7 0 0 0 2.5559E-06 2 59852 124.1 124.1 1 1.2195 1.3484 0 42000000 23301000 18698000 33543 1593 12715 13067 52280;52281 52281 SYLEFSEDSVQVPR 14 0 1 Unmodified _SYLEFSEDSVQVPR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.4029 2 828.399209 1654.78387 66894.65 0.79459 0.00065824 0.046909 3.886E-05 0.8415 0.0006971 828.398971420063 833.403492198231 109.95 0.54694 109.95 109.7 110.24 0 139 28 8 0 0 0 0.00071058 2 63328 74.611 71.186 1 1.3691 1.1661 0 8995500 3469700 5525800 33544 1593 12715 13067 52282;52283 52282 SYLEFSEDSVQVPR 14 0 1 Unmodified _SYLEFSEDSVQVPR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 828.902 2 828.399209 1654.78387 66840.1 0.88159 0.00073031 -0.16267 -0.00013475 0.71893 0.00059556 828.39902476879 833.403285626419 109.84 0.50964 109.84 109.59 110.1 0 150 26 9 0 0 0 0.00010399 2 62396 103.34 99.917 1 1.3375 1.0863 0 12175000 5592900 6581700 33545 1593 12715 13067 52284;52285 52285 SYLEGSSDNQLK 12 1 0 Unmodified _SYLEGSSDNQLK_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6;E9PJ60 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.8282 2 670.820064 1339.62557 NaN NaN NaN 0.31415 0.00021074 NaN NaN NaN NaN 39.315 0.3242 39.315 39.104 39.428 0 0 0 0 0.029594 1 20887 47.706 31.074 1 NaN NaN 0 6556100 0 6556100 33546 1901 12716 13068 52286 52286 SYLENPAFMLLDLK 14 1 0 Oxidation (M) _SYLENPAFM(ox)LLDLK_ SYLENPAFM(1)LLDLK SYLENPAFM(51.29)LLDLK 0 1 0 P11182;B4E1Q7 P11182 P11182 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 839.4369 2 835.428924 1668.84329 NaN NaN NaN -0.74093 -0.00061899 NaN NaN NaN NaN 127.24 0.38609 127.24 127.01 127.39 0 0 0 0 0.0034801 1 82907 51.286 42.179 1 NaN NaN 0 2585300 0 2585300 33547 1469 12717 13069 52287 52287 1183 SYLENPAFMLLDLK 14 1 0 Oxidation (M) _SYLENPAFM(ox)LLDLK_ SYLENPAFM(1)LLDLK SYLENPAFM(58.68)LLDLK 0 1 0 P11182;B4E1Q7 P11182 P11182 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.9315 2 835.428924 1668.84329 71747.13 1.0128 0.00084614 -0.37873 -0.0003164 0.63409 0.00052974 835.428709200348 839.937000144438 126.76 0.53834 126.76 126.52 127.06 0 121 32 6 0 0 0 0.00035842 1 84639 58.676 58.676 1 1.6679 1.7925 0 3768900 1470900 2298000 33548 1469 12717 13069 52288 52288 1183 SYLFNIMDTPGHVNFSDEVTAGLR 24 0 1 Oxidation (M) _SYLFNIM(ox)DTPGHVNFSDEVTAGLR_ SYLFNIM(1)DTPGHVNFSDEVTAGLR SYLFNIM(70.57)DTPGHVNFSDEVTAGLR 0 1 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.7664 3 900.430515 2698.26972 64641.55 0.68545 0.0006172 -0.36632 -0.00032985 0.31913 0.00028735 900.764555047936 904.10080865633 115.44 0.51643 115.44 115.23 115.74 7.6294E-06 224 35 9 0 0 0 2.1988E-12 4 73428 70.569 68.062 1 1.3359 1.3549 0 28722000 13688000 15034000 33549 794 12718 13070 52289;52290;52291;52292 52290 640 SYLFNIMDTPGHVNFSDEVTAGLR 24 0 1 Oxidation (M) _SYLFNIM(ox)DTPGHVNFSDEVTAGLR_ SYLFNIM(1)DTPGHVNFSDEVTAGLR SYLFNIM(122.39)DTPGHVNFSDEVTAGLR 0 1 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.1003 3 900.430515 2698.26972 64678.9 0.78716 0.00070879 -0.6405 -0.00057673 0.14666 0.00013206 900.764549029885 904.100115195373 114.82 0.42532 114.82 114.64 115.07 0 184 26 10 0 0 0 3.9433E-28 2 74766 122.39 122.39 1 1.2878 1.4088 0 39597000 16577000 23019000 33550 794 12718 13070 52293;52294 52294 640 SYLSGGAGAAGGGGADPGNK 20 1 0 Unmodified _SYLSGGAGAAGGGGADPGNK_ 0 0 0 P25490;H0YJV7;H0YJU4 P25490 P25490 YY1 Transcriptional repressor protein YY1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.3875 2 832.387165 1662.75978 68904.8 0.69345 0.00057722 -0.62923 -0.00052376 0.064219 5.3455E-05 832.386509271649 836.393347173894 33.551 0.44945 33.551 33.306 33.755 0 169 43 6 0 0 0 1.1346E-06 1 16767 77.068 77.068 1 0.78486 0.82684 0 15435000 9732000 5702600 33551 1516 12719 13071 52295 52295 SYLSGGAGAAGGGGADPGNK 20 1 0 Unmodified _SYLSGGAGAAGGGGADPGNK_ 0 0 0 P25490;H0YJV7;H0YJU4 P25490 P25490 YY1 Transcriptional repressor protein YY1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 832.8903 2 832.387165 1662.75978 66665.44 0.45784 0.0003811 -0.034979 -2.9116E-05 0.42286 0.00035198 832.387184623074 836.39421131206 38.63 0.46087 38.63 38.389 38.85 0 176 31 8 0 0 0 0.00012582 2 17473 42.317 42.317 1 0.9387 0.74563 0 10092000 5071300 5020400 33552 1516 12719 13071 52296;52297 52296 SYLSGGAGAAGGGGADPGNK 20 1 0 Unmodified _SYLSGGAGAAGGGGADPGNK_ 0 0 0 P25490;H0YJV7;H0YJU4 P25490 P25490 YY1 Transcriptional repressor protein YY1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 836.3933 2 832.387165 1662.75978 65112.11 0.40405 0.00033633 -0.096668 -8.0465E-05 0.30739 0.00025586 832.387387495382 836.393930674293 38.911 0.42481 38.911 38.691 39.115 0 167 33 8 0 0 0 4.3641E-07 1 17201 83.499 83.499 1 1.0706 0.88087 0 10252000 4067900 6184000 33553 1516 12719 13071 52298 52298 SYLYQILQGIVFCHSR 16 0 1 Unmodified _SYLYQILQGIVFCHSR_ 0 0 0 A0A024QZP7;P06493;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.3445 3 662.008494 1983.00365 78240.67 1.0751 0.00071171 -0.24423 -0.00016168 0.83085 0.00055003 662.007960189794 665.344698820523 133.17 0.22342 133.17 133.1 133.32 0 23 6 6 0 0 0 4.5743E-07 3 87152 87.148 87.148 1 1.3063 1.3265 0 9831400 5056700 4774700 33554 25 12720 13072 52299;52300;52301 52300 SYLYQILQGIVFCHSR 16 0 1 Unmodified _SYLYQILQGIVFCHSR_ 0 0 0 A0A024QZP7;P06493;A0A087WZZ9;I6L9I5;E5RIU6 A0A024QZP7 A0A024QZP7 CDC2;CDK1 Cyclin-dependent kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.3439 3 662.008494 1983.00365 76636.11 0.82251 0.00054451 0.12966 8.5834E-05 0.95217 0.00063035 662.343113185053 665.345168018337 133.16 0.5121 133.16 132.75 133.26 0 51 22 8 0 0 0 4.7223E-05 1 89343 55.33 55.33 1 1.2239 1.2286 0 11207000 4210000 6996700 33555 25 12720 13072 52302 52302 SYNDELQFLEK 11 1 0 Unmodified _SYNDELQFLEK_ 0 0 0 Q9Y3I0;B4DNA0;B4DNG5;B4DXF1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.3329 2 693.332807 1384.65106 NaN NaN NaN -0.18896 -0.00013101 NaN NaN NaN NaN 92.145 0.99742 92.145 91.591 92.588 0 0 0 0 4.0351E-08 1 55904 112.75 91.878 1 NaN NaN 0 19221000 19221000 0 33556 2137 12721 13073 52303 52303 SYNDELQFLEK 11 1 0 Unmodified _SYNDELQFLEK_ 0 0 0 Q9Y3I0;B4DNA0;B4DNG5;B4DXF1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.3328 2 693.332807 1384.65106 NaN NaN NaN -1.0612 -0.00073575 NaN NaN NaN NaN 91.355 0.92409 91.355 90.862 91.786 0 0 0 0 5.7494E-16 1 56599 132.01 107.98 1 NaN NaN 0 15544000 15544000 0 33557 2137 12721 13073 52304 52304 SYNDELQFLEK 11 1 0 Unmodified _SYNDELQFLEK_ 0 0 0 Q9Y3I0;B4DNA0;B4DNG5;B4DXF1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.3401 2 693.332807 1384.65106 72290.93 0.5353 0.00037114 -0.6877 -0.0004768 -0.1524 -0.00010567 693.332058686742 697.339363234338 105.34 0.96097 105.34 105.04 106 0 243 59 6 0 0 0 0.00052001 1 60049 74.533 65.199 1 1.4028 1.1218 0 8870800 4230200 4640700 33558 2137 12721 13073 52305 52305 SYNDELQFLEK 11 1 0 Unmodified _SYNDELQFLEK_ 0 0 0 Q9Y3I0;B4DNA0;B4DNG5;B4DXF1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.3325 2 693.332807 1384.65106 72710.49 0.5283 0.00036629 -0.44477 -0.00030838 0.083527 5.7912E-05 693.834089052087 697.339277059285 105.26 0.93856 105.26 104.88 105.82 -7.6294E-06 260 64 6 0 0 0 0.02063 1 59146 53.756 51.484 1 1.3065 1.065 0 6582000 2660700 3921300 33559 2137 12721 13073 52306 52306 SYPLDLEGGSEYK 13 1 0 Unmodified _SYPLDLEGGSEYK_ 0 0 0 B7Z4K4;B3KN91;A0A024QYX5;A0A0S2Z5C9;Q9UET6 B7Z4K4 B7Z4K4 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.3541 2 729.343372 1456.67219 78171.39 0.37641 0.00027453 0.93808 0.00068418 1.3145 0.00095871 729.344335802481 733.351897850401 76.678 0.35875 76.678 76.471 76.83 0 59 24 5 0 0 0 0.00025711 2 46204 67.726 67.726 1 1.7447 1.7594 0 7710700 2280000 5430700 33560 8 12722 13074 52307;52308 52307 SYPLDLEGGSEYK 13 1 0 Unmodified _SYPLDLEGGSEYK_ 0 0 0 B7Z4K4;B3KN91;A0A024QYX5;A0A0S2Z5C9;Q9UET6 B7Z4K4 B7Z4K4 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 733.3523 2 729.343372 1456.67219 80752.38 0.45434 0.00033137 1.5334 0.0011184 1.9877 0.0014497 729.344915455985 733.35210912201 88.749 0.47054 88.749 88.465 88.935 0 75 29 6 0 0 0 0.03805 1 48145 31.843 31.534 1 1.2062 1.0596 0 736360 307970 428390 33561 8 12722 13074 52309 52309 SYQALALWK 9 1 0 Unmodified _SYQALALWK_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3046 2 540.297842 1078.58113 NaN NaN NaN -0.9608 -0.00051912 NaN NaN NaN NaN 91.86 0.23578 91.86 91.744 91.98 0 0 0 0 0.024092 1 55664 55.676 17.438 1 NaN NaN 0 3014600 0 3014600 33562 39 12723 13075 52310 52310 SYQSFQTFR 9 0 1 Unmodified _SYQSFQTFR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;I3L1Z3 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.2787 2 582.277638 1162.54072 82460.73 0.69708 0.0004059 0.39561 0.00023035 1.0927 0.00063625 582.277992027405 587.282151326837 56.368 0.39789 56.368 56.184 56.582 0 130 35 6 0 0 0 0.0042156 1 31810 69.825 40.352 1 1.0996 1.128 0 19308000 9482600 9825100 33563 1699 12724 13076 52311 52311 SYQSFQTFR 9 0 1 Unmodified _SYQSFQTFR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;I3L1Z3 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.2778 2 582.277638 1162.54072 78799.41 0.43764 0.00025483 0.018786 1.0939E-05 0.45643 0.00026577 582.277973344143 587.282279585658 55.349 0.52107 55.349 55.071 55.593 0 126 36 5 0 0 0 0.0014178 2 31759 85.67 56.943 1 0.99948 0.98713 0 14980000 7236000 7744400 33564 1699 12724 13076 52312;52313 52313 SYSEDDIHR 9 0 1 Unmodified _SYSEDDIHR_ 0 0 0 B4DT65;B3KTL8;Q9BYJ9;Q658Z6;Q8NA80;Q8N3V9;A0A024R7W5;Q96MZ5;B5BU99;A0A087X0Q1;B4DPX9;A0A087WY31;Q9Y5A9;Q7Z739 B4DT65 B4DT65 YTHDF1;DKFZp451J085;DKFZp451A052;YTHDF3;YTHDF2 YTH domain-containing family protein 1;YTH domain-containing family protein 2;YTH domain-containing family protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.2516 2 561.246535 1120.47852 NaN NaN NaN 0.26178 0.00014692 NaN NaN NaN NaN 19.083 0.2116 19.083 18.941 19.153 0 0 0 0 0.00016523 1 5841 94.302 75.572 1 NaN NaN 0 1755100 0 1755100 33565 944 12725 13077 52314 52314 SYSLLFR 7 0 1 Unmodified _SYSLLFR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.2497 2 443.245078 884.475603 92125.12 0.36254 0.00016069 0.24344 0.0001079 0.60598 0.0002686 443.245095761102 448.249276754209 84.77 0.76253 84.77 84.423 85.185 0 247 63 6 0 0 0 0.023524 1 50778 90.986 30.627 1 1.1237 1.1496 0 33188000 15955000 17233000 33566 1336 12726 13078 52315 52315 SYSLLFR 7 0 1 Unmodified _SYSLLFR_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.2504 2 443.245078 884.475603 91374.32 0.35397 0.0001569 0.054557 2.4182E-05 0.40853 0.00018108 443.245016576287 448.249150604321 83.538 0.69415 83.538 83.198 83.892 0 219 53 6 0 0 0 0.037563 1 50995 60.788 9.822 1 1.0863 1.1853 0 29794000 15827000 13967000 33567 1336 12726 13078 52316 52316 SYSMIVNNLLK 11 1 0 Oxidation (M) _SYSM(ox)IVNNLLK_ SYSM(1)IVNNLLK SYSM(47.2)IVNNLLK 0 1 0 Q6NVY0;A0A024R904;Q9HB71 Q6NVY0 Q6NVY0 CACYBP Calcyclin-binding protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3522 2 649.344663 1296.67477 NaN NaN NaN -0.36477 -0.00023686 NaN NaN NaN NaN 98.581 0.40618 98.581 98.331 98.737 0 0 0 0 0.012486 1 61556 47.198 29.812 1 NaN NaN 0 4798300 0 4798300 33568 267 12727 13079 52317 52317 205 SYSPSDLVELVAR 13 0 1 Unmodified _SYSPSDLVELVAR_ 0 0 0 Q9H9T3;B4DXV1;B4DPB7;B4DKA4 Q9H9T3 Q9H9T3 ELP3 Elongator complex protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8798 2 718.375006 1434.73546 73557.24 0.92948 0.00066771 -1.045 -0.00075067 -0.11548 -8.2956E-05 718.375315564149 723.378517248718 116.36 0.40218 116.36 116.14 116.54 -7.6294E-06 77 27 4 0 0 0 0.00016502 1 74336 72.2 72.2 1 1.7276 1.7663 0 6683000 2555300 4127700 33569 2047 12728 13080 52318 52318 SYSPSDLVELVAR 13 0 1 Unmodified _SYSPSDLVELVAR_ 0 0 0 Q9H9T3;B4DXV1;B4DPB7;B4DKA4 Q9H9T3 Q9H9T3 ELP3 Elongator complex protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.3797 2 718.375006 1434.73546 73951 1.0703 0.00076891 -1.4805 -0.0010635 -0.41013 -0.00029462 718.374705965877 723.378648378168 115.8 0.48964 115.8 115.59 116.08 0 93 32 5 0 0 0 0.0049341 1 75785 47.894 47.894 1 1.5188 1.5109 0 7764300 4297100 3467200 33570 2047 12728 13080 52319 52319 SYSQQLFLALK 11 1 0 Unmodified _SYSQQLFLALK_ 0 0 0 B4DZQ5;A0A024QZY5;Q13523;H0YDJ3 B4DZQ5 B4DZQ5 PRPF4B Serine/threonine-protein kinase PRP4 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.3586 2 649.36117 1296.70779 NaN NaN NaN -2.4942 -0.0016196 NaN NaN NaN NaN 116.37 0.24329 116.37 116.21 116.45 0 0 0 0 0.035945 1 68355 48.423 36.576 1 NaN NaN 0 792340 792340 0 33571 33 12729 13081 52320 52320 SYSSGGEDGYVR 12 0 1 Unmodified _SYSSGGEDGYVR_ 0 0 0 Q5U0F4;Q53HU7;Q13347;Q9P1D9 Q5U0F4 Q5U0F4 EIF3I Eukaryotic translation initiation factor 3 subunit I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.78 2 638.775656 1275.53676 77712.21 0.70152 0.00044812 -0.040869 -2.6106E-05 0.66066 0.00042201 638.775730846874 643.779673207647 26.51 0.45501 26.51 26.268 26.723 0 89 26 6 0 0 0 0.00022526 1 11857 83.883 78.918 1 1.6265 1.646 0 15267000 6299500 8968000 33572 1711 12730 13082 52321 52321 SYSSGGEDGYVR 12 0 1 Unmodified _SYSSGGEDGYVR_ 0 0 0 Q5U0F4;Q53HU7;Q13347;Q9P1D9 Q5U0F4 Q5U0F4 EIF3I Eukaryotic translation initiation factor 3 subunit I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.7793 2 638.775656 1275.53676 76462.42 0.74741 0.00047743 0.077032 4.9206E-05 0.82444 0.00052663 638.775971270091 643.779812315959 26.106 0.37364 26.106 25.916 26.29 1.9073E-06 76 18 6 0 0 0 1.6138E-05 1 11556 105.2 101.62 1 1.1776 1.182 0 19077000 7638400 11439000 33573 1711 12730 13082 52322 52322 SYSSGGEDGYVR 12 0 1 Unmodified _SYSSGGEDGYVR_ 0 0 0 Q5U0F4;Q53HU7;Q13347;Q9P1D9 Q5U0F4 Q5U0F4 EIF3I Eukaryotic translation initiation factor 3 subunit I MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.7801 2 638.775656 1275.53676 76846.7 0.4323 0.00027614 0.06772 4.3258E-05 0.50002 0.0003194 638.775428543366 643.779770064471 30.431 0.3707 30.431 30.266 30.637 1.9073E-06 95 23 7 0 0 0 0.0050534 2 12594 51.927 51.927 1 1.5907 1.3786 0 2025700 736110 1289600 33574 1711 12730 13082 52323;52324 52323 SYSSGGEDGYVR 12 0 1 Unmodified _SYSSGGEDGYVR_ 0 0 0 Q5U0F4;Q53HU7;Q13347;Q9P1D9 Q5U0F4 Q5U0F4 EIF3I Eukaryotic translation initiation factor 3 subunit I MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.7802 2 638.775656 1275.53676 77066.88 0.36642 0.00023406 0.26208 0.00016741 0.6285 0.00040147 638.775804895106 643.779878983506 30.633 0.41066 30.633 30.439 30.85 1.9073E-06 93 22 6 0 0 0 0.00058242 2 12256 68.847 67.244 1 1.5449 1.3357 0 1635500 626300 1009200 33575 1711 12730 13082 52325;52326 52325 SYVDLYVK 8 1 0 Unmodified _SYVDLYVK_ 0 0 0 Q71UH4;Q02880;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.764 2 493.7633 985.512048 86208.63 0.095897 4.735E-05 0.57179 0.00028233 0.66769 0.00032968 493.76333851425 497.7707438298 82.626 0.90686 82.626 82.406 83.313 0 242 51 7 0 0 0 0.051374 1 44063 43.246 37.587 1 1.116 0.90874 0 7347600 3427200 3920500 33576 1679 12731 13083 52327 52327 SYVDMYLK 8 1 0 Oxidation (M) _SYVDM(ox)YLK_ SYVDM(1)YLK SYVDM(67.98)YLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.7468 2 517.746793 1033.47903 83347.06 0.21678 0.00011224 0.37823 0.00019583 0.59502 0.00030807 517.746834258218 521.753911541385 66.738 1.4738 66.738 66.034 67.508 7.6294E-06 606 119 6 0 0 0 0.0059502 4 38691 67.981 48.126 1 0.91495 1.0326 0 134800000 73827000 60974000 33577 1471 12732 13084 52328;52329;52330;52331 52330 1212 SYVDMYLK 8 1 0 Oxidation (M) _SYVDM(ox)YLK_ SYVDM(1)YLK SYVDM(46.43)YLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.7544 2 517.746793 1033.47903 82879.95 0.55441 0.00028704 -0.16795 -8.6955E-05 0.38646 0.00020009 517.746836214734 521.753806494886 68.136 1.4138 68.136 67.423 68.836 0 737 122 10 0 0 0 0.020664 1 39359 46.426 35.357 1 0.90449 1.064 0 316970000 170070000 146900000 33578 1471 12732 13084 52332 52332 1212 SYVDMYLK 8 1 0 Oxidation (M) _SYVDM(ox)YLK_ SYVDM(1)YLK SYVDM(75.24)YLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1042.4983 1 1034.48631 1033.47903 NaN NaN NaN 0.013598 1.4067E-05 NaN NaN NaN NaN 68.153 0.41656 68.153 67.869 68.285 0 0 0 0 0.010279 1 39429 75.243 25.219 1 NaN NaN 0 5795200 0 5795200 33579 1471 12732 13084 52333 52333 1212 SYVDMYLK 8 1 0 Oxidation (M) _SYVDM(ox)YLK_ SYVDM(1)YLK SYVDM(75.85)YLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.7542 2 517.746793 1033.47903 82750.95 0.26186 0.00013558 0.41731 0.00021606 0.67918 0.00035164 517.746851463779 521.75391564581 65.82 1.5252 65.82 64.95 66.475 0 628 127 7 0 0 0 0.0043994 3 38932 75.854 57.124 1 0.92517 1.0684 0 193560000 102080000 91487000 33580 1471 12732 13084 52334;52335;52336 52336 1212 SYVDMYLK 8 1 0 Oxidation (M) _SYVDM(ox)YLK_ SYVDM(1)YLK SYVDM(63.57)YLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.7471 2 517.746793 1033.47903 82262.81 0.25522 0.00013214 -0.1337 -6.9224E-05 0.12152 6.2917E-05 517.74690410464 521.753831341215 66.908 1.0482 66.908 66.475 67.523 0 720 87 12 0 0 0 0.0068778 2 39469 63.565 48.126 1 0.91573 1.0742 0 332870000 172000000 160870000 33581 1471 12732 13084 52337;52338 52337 1212 SYVDMYLK 8 1 0 Oxidation (M) _SYVDM(ox)YLK_ SYVDM(1)YLK SYVDM(60.68)YLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.747 2 517.746793 1033.47903 79643.51 0.21508 0.00011135 0.31631 0.00016377 0.53139 0.00027512 517.746772400747 521.753885220638 76.832 1.0331 76.832 76.309 77.343 0 387 70 8 0 0 0 0.0082738 1 40124 60.682 42.834 1 0.94646 0.75842 0 19838000 10155000 9683200 33582 1471 12732 13084 52339 52339 1212 SYVDMYLK 8 1 0 Oxidation (M) _SYVDM(ox)YLK_ SYVDM(1)YLK SYVDM(62.46)YLK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.7539 2 517.746793 1033.47903 83482.47 0.34854 0.00018046 -0.17722 -9.1754E-05 0.17132 8.8701E-05 517.746857718876 521.753830928193 78.147 1.1864 78.147 77.639 78.826 0 478 77 11 0 0 0 0.007109 2 41021 62.464 52.05 1 0.97936 0.81347 0 37057000 18370000 18687000 33583 1471 12732 13084 52340;52341 52340 1212 SYVDMYLK 8 1 0 Unmodified _SYVDMYLK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.7566 2 509.749336 1017.48412 81284.25 0.7081 0.00036095 -0.23964 -0.00012216 0.46846 0.0002388 509.749294944519 513.756214014259 88.831 1.1316 88.831 88.355 89.486 0 390 72 7 0 0 0 0.032325 2 48884 50.703 32.668 1 1.5455 1.2057 0 15917000 6267400 9649900 33584 1471 12732 13085 52342;52343 52342 SYVDPSTDER 10 0 1 Unmodified _SYVDPSTDER_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.7598 2 584.759475 1167.5044 79387.81 0.44785 0.00026188 0.10157 5.9392E-05 0.54942 0.00032128 584.759494922927 589.763502855695 27.158 0.41228 27.158 26.926 27.339 0 120 20 9 0 0 0 0.000817 2 12386 80.755 52.873 1 1.9947 2.1256 0 43706000 14112000 29594000 33585 1754 12733 13086 52344;52345 52344 SYVDPSTDER 10 0 1 Unmodified _SYVDPSTDER_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.7596 2 584.759475 1167.5044 76795.55 0.77913 0.0004556 0.086192 5.0401E-05 0.86532 0.000506 584.759436044814 589.763367071302 26.724 0.46975 26.724 26.524 26.994 0 104 22 7 0 0 0 0.00018094 1 12105 94.692 54.423 1 1.9642 2.2736 0 67603000 23375000 44228000 33586 1754 12733 13086 52346 52346 SYVDPSTDER 10 0 1 Unmodified _SYVDPSTDER_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.7638 2 584.759475 1167.5044 NaN NaN NaN 0.08096 4.7342E-05 NaN NaN NaN NaN 30.873 0.66117 30.873 30.637 31.298 1.9073E-06 0 0 0 0.0043671 1 12904 72.928 49.16 1 NaN NaN 0 4515700 0 4515700 33587 1754 12733 13086 52347 52347 SYVDPSTDER 10 0 1 Unmodified _SYVDPSTDER_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 589.7635 2 584.759475 1167.5044 79390.34 0.38844 0.00022715 0.45146 0.000264 0.8399 0.00049114 584.759754399596 589.763712432962 31.082 0.63013 31.082 30.79 31.42 -1.9073E-06 130 32 6 0 0 0 0.0067028 1 12537 58.433 41.337 1 2.4151 2.0037 0 5128700 1723600 3405100 33588 1754 12733 13086 52348 52348 TAAALAPASLTSAR 14 0 1 Unmodified _TAAALAPASLTSAR_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.8661 2 650.864608 1299.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.654 1 67.654 67.154 68.154 0 0 0 0 0.043645 1 39136 41.283 10.21 1 33589 619 12734 13087 52349 52349 TAAALAPASLTSAR 14 0 1 Unmodified _TAAALAPASLTSAR_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.8659 2 650.864608 1299.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.737 1 67.737 67.237 68.237 0 0 0 0 0.0027117 1 39189 60.434 34.495 1 33590 619 12734 13087 52350 52350 TAAENEFVTLK 11 1 0 Unmodified _TAAENEFVTLK_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.8193 2 611.819335 1221.62412 NaN NaN NaN 1.6604 0.0010158 NaN NaN NaN NaN 77.504 0.89117 77.504 76.992 77.883 7.6294E-06 0 0 0 0.0048604 1 41488 65.627 44.163 1 NaN NaN 0 6215200 6215200 0 + 33591 859;1154 12735 13088 52351 52351 TAAENEFVTLK 11 1 0 Unmodified _TAAENEFVTLK_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259 B2R853;CON__P04259 B2R853 KRT6C;KRT6A Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.8203 2 611.819335 1221.62412 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.807 1 77.807 77.307 78.307 0 0 0 0 2.7356E-06 1 40857 99.568 66.306 1 + 33592 859;1154 12735 13088 52352 52352 TAAENEFVVLK 11 1 0 Unmodified _TAAENEFVVLK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.8308 2 610.829703 1219.64485 77853.46 0.50709 0.00030974 0.21433 0.00013092 0.72142 0.00044066 610.830382409798 614.836113177671 78.689 0.9099 78.689 78.237 79.147 -7.6294E-06 458 81 8 0 0 0 0.00018048 3 46482 93.649 6.8775 1 0.96292 1.0862 0 131920000 63827000 68096000 + 33593 1171;1158 12736 13089 52353;52354;52355 52353 TAAENEFVVLK 11 1 0 Unmodified _TAAENEFVVLK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.8369 2 610.829703 1219.64485 77817.57 0.62448 0.00038145 0.27477 0.00016784 0.89925 0.00054929 610.82993187986 614.836712966659 77.486 0.88421 77.486 77.106 77.991 0 466 73 10 0 0 0 7.3902E-08 3 46848 113.62 8.1014 1 0.98282 1.1387 0 212300000 106810000 105490000 + 33594 1171;1158 12736 13089 52356;52357;52358 52358 TAAENEFVVLK 11 1 0 Unmodified _TAAENEFVVLK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.837 2 610.829703 1219.64485 77131.21 0.32386 0.00019782 0.40171 0.00024537 0.72557 0.0004432 610.829414607688 614.836931994244 89.907 0.97323 89.907 89.439 90.412 0 309 67 7 0 0 0 8.7899E-06 2 49748 109.29 7.9483 1 0.96156 0.74471 0 13060000 6692600 6367200 + 33595 1171;1158 12736 13089 52359;52360 52360 TAAENEFVVLK 11 1 0 Unmodified _TAAENEFVVLK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.8372 2 610.829703 1219.64485 76262.04 0.26945 0.00016459 0.3442 0.00021025 0.61365 0.00037484 610.829640658831 614.836912290045 89.809 0.92321 89.809 89.371 90.294 0 317 60 7 0 0 0 0.00043721 3 48806 78.556 6.9428 1 1.0072 0.82973 0 12112000 6108800 6003400 + 33596 1171;1158 12736 13089 52361;52362;52363 52362 TAAFALPVLER 11 0 1 Unmodified _TAAFALPVLER_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.3432 2 594.342781 1186.67101 78430.25 0.85883 0.00051044 -0.069886 -4.1536E-05 0.78895 0.0004689 594.342597011336 599.346804058477 109.28 0.91745 109.28 108.9 109.82 0 358 65 8 0 0 0 1.548E-10 2 68258 135.55 135.55 1 0.81601 0.91839 0 96466000 53909000 42557000 33597 899;1099 12737 13090 52364;52365 52365 TAAFALPVLER 11 0 1 Unmodified _TAAFALPVLER_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.3472 2 594.342781 1186.67101 78380.4 0.69455 0.0004128 0.14513 8.6256E-05 0.83968 0.00049906 594.342721211443 599.346905724546 108.65 0.87209 108.65 108.26 109.13 7.6294E-06 343 62 8 0 0 0 6.3169E-10 2 69415 128.03 119.99 1 0.7874 0.89784 0 98079000 54018000 44062000 33598 899;1099 12737 13090 52366;52367 52366 TAAFALPVLER 11 0 1 Unmodified _TAAFALPVLER_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.3466 2 594.342781 1186.67101 78582.67 0.49744 0.00029565 0.51684 0.00030718 1.0143 0.00060283 594.342976829433 599.347229072222 120.49 1.0428 120.49 119.97 121.01 0 224 47 10 0 0 0 0.00026131 2 71444 90.149 78.927 1 1.1268 0.96047 0 36521000 17077000 19445000 33599 899;1099 12737 13090 52368;52369 52369 TAAFALPVLER 11 0 1 Unmodified _TAAFALPVLER_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.3467 2 594.342781 1186.67101 78400.55 0.83423 0.00049582 0.30906 0.00018369 1.1433 0.00067951 594.342838930339 599.347044242479 120.22 0.8838 120.22 119.77 120.65 7.6294E-06 233 44 8 0 0 0 0.00090132 2 70349 71.614 65.832 1 1.0706 0.93389 0 29288000 14298000 14990000 33600 899;1099 12737 13090 52370;52371 52371 TAAGEYDSVSESEDEEMLEIR 21 0 1 Oxidation (M) _TAAGEYDSVSESEDEEM(ox)LEIR_ TAAGEYDSVSESEDEEM(1)LEIR TAAGEYDSVSESEDEEM(74.48)LEIR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1194.512 2 1188.5052 2374.99585 NaN NaN NaN 0.023295 2.7686E-05 NaN NaN NaN NaN 78.679 0.538 78.679 78.418 78.956 -7.6294E-06 0 0 0 4.624E-09 1 46522 74.475 69.298 1 NaN NaN 0 9168200 0 9168200 33601 1183 12738 13091 52372 52372 901 TAAGEYDSVSESEDEEMLEIR 21 0 1 Oxidation (M) _TAAGEYDSVSESEDEEM(ox)LEIR_ TAAGEYDSVSESEDEEM(1)LEIR TAAGEYDSVSESEDEEM(70.89)LEIR 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1189.0052 2 1188.5052 2374.99585 57136.05 0.064936 7.7176E-05 0.061113 7.2633E-05 0.12605 0.00014981 1189.00612003531 1194.01073919011 77.829 0.46445 77.829 77.605 78.069 0 140 39 5 0 0 0 3.3598E-08 1 47122 70.889 66.584 1 3.1875 3.1646 0 16080000 5622100 10458000 33602 1183 12738 13091 52373 52373 901 TAANLVVETGQDGVQIR 17 0 1 Unmodified _TAANLVVETGQDGVQIR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.9719 2 885.970864 1769.92718 64965.96 0.84186 0.00074586 0.12052 0.00010678 0.96238 0.00085264 886.472015004517 890.975195519455 84.778 0.69385 84.778 84.479 85.173 0 313 57 8 0 0 0 1.6252E-13 2 50694 124.3 124.3 1 1.0406 1.1699 0 95044000 46171000 48872000 33603 1820 12739 13092 52374;52375 52375 TAANLVVETGQDGVQIR 17 0 1 Unmodified _TAANLVVETGQDGVQIR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 890.9765 2 885.970864 1769.92718 64891.89 0.84811 0.0007514 0.72449 0.00064188 1.5726 0.0013933 886.473093232343 890.975625757513 83.925 0.70041 83.925 83.556 84.257 0 334 58 8 0 0 0 1.2894E-06 1 51255 120.59 120.59 1 1.017 1.1635 0 160760000 82519000 78246000 33604 1820 12739 13092 52376 52376 TAANLVVETGQDGVQIR 17 0 1 Unmodified _TAANLVVETGQDGVQIR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 885.9718 2 885.970864 1769.92718 64110.67 0.6198 0.00054913 0.28425 0.00025184 0.90405 0.00080097 885.971119097992 890.975274846299 97.462 1.1317 97.462 97.1 98.232 -7.6294E-06 426 68 10 0 0 0 3.0786E-34 2 54760 155.66 155.66 1 1.9543 1.6808 0 48294000 16292000 32002000 33605 1820 12739 13092 52377;52378 52378 TAANLVVETGQDGVQIR 17 0 1 Unmodified _TAANLVVETGQDGVQIR_ 0 0 0 Q5T3I0;A8KAG1;A0A0A0MRK1;E9PAV9;E9PPY4;F2Z3C6;B4DVU2 Q5T3I0 Q5T3I0 GPATCH4 G patch domain-containing protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 885.9698 2 885.970864 1769.92718 64365.36 0.086153 7.6329E-05 0.41434 0.00036709 0.50049 0.00044342 886.472584536298 890.975426067186 97.308 1.1816 97.308 96.977 98.158 7.6294E-06 423 65 10 0 0 0 1.3569E-13 3 53854 124.47 124.47 1 1.9914 1.7373 0 46937000 14926000 32011000 33606 1820 12739 13092 52379;52380;52381 52380 TAAPSPSLLYK 11 1 0 Unmodified _TAAPSPSLLYK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.3298 2 574.321514 1146.62847 82348.45 0.60764 0.00034898 0.86709 0.00049799 1.4747 0.00084697 574.322234326338 578.328966784213 69.284 0.41565 69.284 69.096 69.512 7.6294E-06 143 34 6 0 0 0 0.00047771 1 40227 75.378 65.597 1 1.0682 1.1373 0 16007000 8349100 7657600 33607 2002 12740 13093 52382 52382 TAAPSPSLLYK 11 1 0 Unmodified _TAAPSPSLLYK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.3292 2 574.321514 1146.62847 NaN NaN NaN 0.23885 0.00013718 NaN NaN NaN NaN 68.047 0.32539 68.047 67.904 68.229 0 0 0 0 0.012545 1 40377 55.908 22.112 1 NaN NaN 0 8194400 0 8194400 33608 2002 12740 13093 52383 52383 TAAPSPSLLYK 11 1 0 Unmodified _TAAPSPSLLYK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.329 2 574.321514 1146.62847 81030.87 0.35525 0.00020403 0.28283 0.00016244 0.63809 0.00036647 574.321347627226 578.328896708126 79.494 0.68154 79.494 79.167 79.849 0 171 41 6 0 0 0 0.019604 1 41901 44.203 40.947 1 1.8226 1.4818 0 4499100 1344000 3155200 33609 2002 12740 13093 52384 52384 TAAPSVRPEK 10 1 1 Unmodified _TAAPSVRPEK_ 0 0 1 Q14137;B2RDN4;A8K3R2;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.2961 2 528.29583 1054.57711 82903.15 0.25483 0.00013462 0.056537 2.9868E-05 0.31136 0.00016449 528.295744829237 537.307077705585 17.793 0.30803 17.793 17.683 17.991 0 41 11 7 0 0 0 2.4314E-15 2 4884 162.88 137.32 1 0.90723 1.0854 0 55308000 29059000 26249000 33610 1726 12741 13094 52385;52386 52385 TAAPSVRPEK 10 1 1 Unmodified _TAAPSVRPEK_ 0 0 1 Q14137;B2RDN4;A8K3R2;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 352.533 3 352.532979 1054.57711 100182.8 -0.02102 -7.4102E-06 0.084627 2.9834E-05 0.063607 2.2424E-05 352.53292625719 358.540486661757 17.793 0.3889 17.793 17.617 18.006 0 49 13 8 0 0 0 3.6016E-06 1 4898 106.88 83.527 1 0.82301 0.98889 0 73278000 39963000 33315000 33611 1726 12741 13094 52387 52387 TAAPSVRPEK 10 1 1 Unmodified _TAAPSVRPEK_ 0 0 1 Q14137;B2RDN4;A8K3R2;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 352.5327 3 352.532979 1054.57711 99080.52 0.13751 4.8479E-05 -0.092883 -3.2744E-05 0.044632 1.5734E-05 352.53291565624 358.540413166371 17.746 0.32601 17.746 17.604 17.93 0 69 12 8 0 0 0 6.5658E-06 2 4632 102.06 82.071 1 0.90014 1.0593 0 79886000 40339000 39546000 33612 1726 12741 13094 52388;52389 52389 TAAPSVRPEK 10 1 1 Unmodified _TAAPSVRPEK_ 0 0 1 Q14137;B2RDN4;A8K3R2;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.2962 2 528.29583 1054.57711 83301.72 0.39149 0.00020682 -0.056738 -2.9974E-05 0.33476 0.00017685 528.295761803581 537.306938837766 17.746 0.34301 17.746 17.632 17.975 0 66 14 8 0 0 0 2.4314E-15 2 4615 162.88 133.72 1 0.83529 0.98358 0 87867000 46740000 41127000 33613 1726 12741 13094 52390;52391 52390 TAAPTTASAAPQGPLR 16 0 1 Unmodified _TAAPTTASAAPQGPLR_ 0 0 0 Q96L91;A7E2D7 Q96L91 Q96L91 EP400 E1A-binding protein p400 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.4088 2 755.404629 1508.79471 74169.04 0.5946 0.00044916 -0.19995 -0.00015104 0.39465 0.00029812 755.404439518631 760.910119719594 45.741 0.33746 45.741 45.574 45.912 0 77 29 5 0 0 0 0.00064973 1 25136 48.568 48.568 1 0.71162 0.70793 0 8225100 3781400 4443800 33614 1977 12742 13095 52392 52392 TAASFDECSTAGVFLSTLHCQDYR 24 0 1 Unmodified _TAASFDECSTAGVFLSTLHCQDYR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 913.0742 3 912.739131 2735.19556 63922.9 0.52432 0.00047857 0.063267 5.7747E-05 0.58759 0.00053632 913.407668837487 916.409937373589 107.74 0.59341 107.74 107.48 108.08 0 277 43 9 0 0 0 3.4395E-16 2 67261 92.426 90.203 1 0.762 0.77389 0 29174000 15299000 13875000 33615 740 12743 13096 52393;52394 52394 TAASFDECSTAGVFLSTLHCQDYR 24 0 1 Unmodified _TAASFDECSTAGVFLSTLHCQDYR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.4099 3 912.739131 2735.19556 64325.39 0.74667 0.00068152 -0.021457 -1.9585E-05 0.72522 0.00066193 913.073332215029 916.409764877637 107.13 0.61668 107.13 106.89 107.5 0 265 41 10 0 0 0 1.4872E-27 2 68427 116.24 109.95 1 0.74818 0.81898 0 30889000 16853000 14036000 33616 740 12743 13096 52395;52396 52396 TAASFDECSTAGVFLSTLHCQDYR 24 0 1 Unmodified _TAASFDECSTAGVFLSTLHCQDYR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 913.0735 3 912.739131 2735.19556 62283.2 0.63847 0.00058276 -0.30661 -0.00027985 0.33186 0.00030291 913.073274155309 916.409347435301 118.69 1.1898 118.69 118.31 119.5 -7.6294E-06 326 54 12 0 0 0 1.7112E-27 2 70108 114.88 112.65 1 1.6634 1.4362 0 90044000 33738000 56306000 33617 740 12743 13096 52397;52398 52397 TAASFDECSTAGVFLSTLHCQDYR 24 0 1 Unmodified _TAASFDECSTAGVFLSTLHCQDYR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 913.074 3 912.739131 2735.19556 62373 0.64194 0.00058592 -0.36588 -0.00033395 0.27606 0.00025197 913.073194446832 916.409421561254 118.51 0.83556 118.51 118.25 119.09 -7.6294E-06 320 39 12 0 0 0 4.5767E-21 2 69012 106.43 104.18 1 1.6213 1.4148 0 68544000 26361000 42183000 33618 740 12743 13096 52399;52400 52400 TAASGIPYHSEVPVSLK 17 1 0 Unmodified _TAASGIPYHSEVPVSLK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 588.9875 3 585.98071 1754.9203 NaN NaN NaN 0.33258 0.00019488 NaN NaN NaN NaN 76.491 0.53435 76.491 76.239 76.774 0 0 0 0 0.016463 1 45153 30.593 18.038 1 NaN NaN 0 10636000 0 10636000 33619 415 12744 13097 52401 52401 TAASGIPYHSEVPVSLK 17 1 0 Unmodified _TAASGIPYHSEVPVSLK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.9869 3 585.98071 1754.9203 NaN NaN NaN 0.24699 0.00014473 NaN NaN NaN NaN 75.27 0.5426 75.27 75.004 75.546 0 0 0 0 0.0075104 1 45354 38.613 30.436 1 NaN NaN 0 10081000 0 10081000 33620 415 12744 13097 52402 52402 TAASGIPYHSEVPVSLK 17 1 0 Unmodified _TAASGIPYHSEVPVSLK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 588.6529 3 585.98071 1754.9203 NaN NaN NaN 0.08673 5.0822E-05 NaN NaN NaN NaN 87.681 0.4897 87.681 87.473 87.963 0 0 0 0 0.013433 1 48219 33.308 21.162 1 NaN NaN 0 2333900 0 2333900 33621 415 12744 13097 52403 52403 TAASGIPYHSEVPVSLK 17 1 0 Unmodified _TAASGIPYHSEVPVSLK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 588.9873 3 585.98071 1754.9203 NaN NaN NaN 0.23414 0.0001372 NaN NaN NaN NaN 87.583 0.44534 87.583 87.378 87.824 0 0 0 0 0.040072 1 47348 25.824 14.133 1 NaN NaN 0 2863200 0 2863200 33622 415 12744 13097 52404 52404 TAAYAIPMLQLLLHR 15 0 1 Oxidation (M) _TAAYAIPM(ox)LQLLLHR_ TAAYAIPM(1)LQLLLHR TAAYAIPM(49.3)LQLLLHR 0 1 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8;F8WEI3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.3272 3 576.327275 1725.96 81794.09 0.78025 0.00044968 -0.24724 -0.00014249 0.53301 0.00030719 576.327253792116 579.663336638808 116.54 0.56796 116.54 116.21 116.78 0 143 39 6 0 0 0 0.000227 1 74462 49.298 49.298 1 1.6956 1.7761 0 12535000 4483700 8050900 33623 2081 12745 13098 52405 52405 1919 TAAYAIPMLQLLLHRK 16 1 1 Unmodified _TAAYAIPMLQLLLHRK_ 0 0 1 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8;F8WEI3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.0359 3 613.693958 1838.06004 78539.49 0.61587 0.00037796 -0.21875 -0.00013425 0.39712 0.00024371 613.693800947954 619.701615272177 129.21 0.67343 129.21 128.89 129.56 0 123 31 6 0 0 0 0.0043685 1 78058 29.981 29.981 1 1.2614 1.1497 0 1682600 674080 1008500 33624 2081 12746 13099 52406 52406 TAAYAIPMLQLLLHRK 16 1 1 Unmodified _TAAYAIPMLQLLLHRK_ 0 0 1 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8;F8WEI3 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 619.7021 3 613.693958 1838.06004 81494.32 0.78004 0.00047871 -0.16869 -0.00010352 0.61135 0.00037518 613.693947988742 619.701415052077 128.77 0.46017 128.77 128.59 129.05 0 64 17 6 0 0 0 0.00083362 1 76947 37.092 37.092 1 1.4166 1.1936 0 4043300 1745200 2298000 33625 2081 12746 13099 52407 52407 TAAYGHFGR 9 0 1 Unmodified _TAAYGHFGR_ 0 0 0 A0A140VJP5;P31153;B4E1K2 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 330.4987 3 327.162998 978.467164 105344.5 0.31858 0.00010423 -0.19456 -6.3652E-05 0.12402 4.0574E-05 327.16281334499 330.498965303806 22.723 0.43883 22.723 22.575 23.014 0 107 25 7 0 0 0 0.011379 1 8692 47.198 47.198 1 1.9396 2.0196 0 21798000 7048600 14749000 33626 606 12747 13100 52408 52408 TAAYGHFGR 9 0 1 Unmodified _TAAYGHFGR_ 0 0 0 A0A140VJP5;P31153;B4E1K2 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.2415 2 490.240858 978.467164 84046.46 0.40746 0.00019975 -0.45855 -0.0002248 -0.051097 -2.505E-05 490.241063115881 495.244470211258 22.713 0.55961 22.713 22.543 23.103 0 79 32 4 0 0 0 0.005317 2 8709 67.032 67.032 1 2.1854 2.2533 0 24339000 7228600 17110000 33627 606 12747 13100 52409;52410 52410 TAAYGHFGR 9 0 1 Unmodified _TAAYGHFGR_ 0 0 0 A0A140VJP5;P31153;B4E1K2 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 327.1628 3 327.162998 978.467164 104097 0.13344 4.3657E-05 -0.20814 -6.8096E-05 -0.074699 -2.4439E-05 327.162788747787 330.49895662047 22.303 0.41058 22.303 22.177 22.588 0 75 17 7 0 0 0 0.0038953 2 8353 57.59 57.59 1 1.9856 2.1578 0 28457000 9310800 19146000 33628 606 12747 13100 52411;52412 52412 TAAYGHFGR 9 0 1 Unmodified _TAAYGHFGR_ 0 0 0 A0A140VJP5;P31153;B4E1K2 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2451 2 490.240858 978.467164 86472.64 0.25065 0.00012288 -0.092517 -4.5356E-05 0.15814 7.7525E-05 490.240689062884 495.244934236846 22.334 0.41058 22.334 22.177 22.588 0 61 17 5 0 0 0 0.001453 2 8325 85.212 76.882 1 1.8863 2.0602 0 38171000 14263000 23908000 33629 606 12747 13100 52413;52414 52414 TADSSSSEDEEEYVVEK 17 1 0 Unmodified _TADSSSSEDEEEYVVEK_ 0 0 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.9106 2 952.399997 1902.78544 63864.45 0.72863 0.00069395 -0.28033 -0.00026699 0.4483 0.00042696 952.901291765232 956.908195199436 43.052 0.42181 43.052 42.856 43.278 0 105 34 6 0 0 0 1.7058E-05 1 23308 84.297 84.297 1 0.93984 0.94136 0 15719000 8052900 7666300 33630 1568 12748 13101 52415 52415 TAEDYSVDENGQR 13 0 1 Unmodified _TAEDYSVDENGQR_ 0 0 0 Q8TAF6;O60488;B4DH39;H0Y9A0 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.323 2 742.318416 1482.62228 71305.2 0.35519 0.00026367 0.011337 8.4154E-06 0.36653 0.00027208 742.318529576107 747.322534262707 24.57 0.43719 24.57 24.314 24.752 1.9073E-06 56 16 6 0 0 0 5.4353E-20 2 10263 150.1 146.06 1 1.2712 1.3315 0 12549000 5569200 6979400 33631 1394 12749 13102 52416;52417 52416 TAEDYSVDENGQR 13 0 1 Unmodified _TAEDYSVDENGQR_ 0 0 0 Q8TAF6;O60488;B4DH39;H0Y9A0 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3234 2 742.318416 1482.62228 70888.3 0.46992 0.00034883 0.18419 0.00013673 0.65411 0.00048556 742.318679278865 747.322819777716 24.366 0.37681 24.366 24.156 24.533 0 60 16 5 0 0 0 5.325E-19 2 10059 145.99 138.1 1 1.5369 1.5295 0 8873000 4592200 4280800 33632 1394 12749 13102 52418;52419 52418 TAEDYSVDENGQR 13 0 1 Unmodified _TAEDYSVDENGQR_ 0 0 0 Q8TAF6;O60488;B4DH39;H0Y9A0 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.3242 2 742.318416 1482.62228 72370.95 0.7339 0.00054479 0.10855 8.0578E-05 0.84245 0.00062537 742.318513153801 747.322607955836 27.845 0.35974 27.845 27.615 27.974 0 52 13 6 0 0 0 0.0076324 2 10934 44.847 42.001 1 1.028 0.90282 0 1794600 889450 905120 33633 1394 12749 13102 52420;52421 52421 TAEEEELAEEK 11 1 0 Unmodified _TAEEEELAEEK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.2911 2 639.290805 1276.56706 76250.83 0.80765 0.00051632 0.53378 0.00034124 1.3414 0.00085756 639.291030714201 643.298241016355 28.824 0.30305 28.824 28.7 29.003 0 68 15 6 0 0 0 2.7976E-17 2 13765 160.75 160.75 1 1.2417 1.3434 0 35891000 16132000 19758000 33634 104 12750 13103 52422;52423 52423 TAEEEELAEEK 11 1 0 Unmodified _TAEEEELAEEK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.2985 2 639.290805 1276.56706 NaN NaN NaN -0.03039 -1.9428E-05 NaN NaN NaN NaN 28.154 0.22456 28.154 28.01 28.235 -1.9073E-06 0 0 0 5.6291E-12 1 13368 125.74 116.82 1 NaN NaN 0 39848000 0 39848000 33635 104 12750 13103 52424 52424 TAEEEELAEEK 11 1 0 Unmodified _TAEEEELAEEK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.2913 2 639.290805 1276.56706 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.203 1 28.203 27.703 28.703 0 0 0 0 9.8628E-18 1 13398 133.23 101.29 1 33636 104 12750 13103 52425 52425 TAEEEELAEEK 11 1 0 Unmodified _TAEEEELAEEK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.2979 2 639.290805 1276.56706 77681.43 0.32312 0.00020657 -0.030605 -1.9565E-05 0.29252 0.000187 639.290772275929 643.298023497663 32.925 0.25018 32.925 32.796 33.046 3.8147E-06 45 12 6 0 0 0 0.00048447 2 14352 74.849 74.849 1 1.5512 1.2407 0 7089300 2732500 4356800 33637 104 12750 13103 52426;52427 52426 TAEEENPEHVEIQK 14 1 0 Unmodified _TAEEENPEHVEIQK_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.8988 2 826.891748 1651.76894 66060.63 0.70326 0.00058152 -2.5542 -0.002112 -1.8509 -0.0015305 826.891976942075 831.396220555753 28.977 0.73066 28.977 28.65 29.381 0 138 41 9 0 0 0 9.0961E-134 2 13800 263.74 221.4 1 1.4488 1.6365 0 81633000 28444000 53189000 33638 924 12751 13104 52428;52429 52429 TAEEENPEHVEIQK 14 1 0 Unmodified _TAEEENPEHVEIQK_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.5972 3 551.596924 1651.76894 80957.59 0.61581 0.00033968 -1.9919 -0.0010987 -1.3761 -0.00075906 551.597009981172 554.600113201327 28.925 0.81335 28.925 28.589 29.403 0 191 46 10 0 0 0 5.2134E-22 2 13794 121.48 112.47 1 1.2336 1.3884 0 120350000 56189000 64164000 33639 924 12751 13104 52430;52431 52430 TAEEENPEHVEIQK 14 1 0 Unmodified _TAEEENPEHVEIQK_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.2694 3 551.596924 1651.76894 NaN NaN NaN -3.3614 -0.0018542 NaN NaN NaN NaN 28.493 0.2949 28.493 28.397 28.692 0 0 0 0 0.050361 1 13669 26.682 15.068 1 NaN NaN 0 9221800 0 9221800 33640 924 12751 13104 52432 52432 TAEEENPEHVEIQK 14 1 0 Unmodified _TAEEENPEHVEIQK_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.9308 3 551.596924 1651.76894 81350.91 0.50122 0.00027647 -0.16297 -8.9896E-05 0.33824 0.00018657 551.596675343309 554.268292362199 34.13 0.74734 34.13 33.66 34.407 0 356 66 8 0 0 0 0.0069454 2 14883 41.996 41.996 1 1.1602 0.89851 0 13068000 6124600 6943600 33641 924 12751 13104 52433;52434 52433 TAEEENPEHVEIQK 14 1 0 Unmodified _TAEEENPEHVEIQK_ 0 0 0 B3KPV5;O00566 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.5963 3 551.596924 1651.76894 81011.79 0.54506 0.00030066 -0.10048 -5.5422E-05 0.44459 0.00024523 551.596767310564 554.26828456676 34.173 0.7557 34.173 33.887 34.643 0 347 61 8 0 0 0 0.0002277 1 14532 57.136 57.136 1 1.203 0.96616 0 15161000 6945200 8215500 33642 924 12751 13104 52435 52435 TAEEVAALIR 10 0 1 Unmodified _TAEEVAALIR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.804 2 536.803488 1071.59242 83205.99 0.25792 0.00013845 -0.065087 -3.4939E-05 0.19283 0.00010351 536.803496046241 541.807451089147 76.195 0.99768 76.195 75.843 76.84 0 315 83 6 0 0 0 0.00050835 1 45893 85.731 76.517 1 1.0634 1.1569 0 28808000 15095000 13713000 33643 1854 12752 13105 52436 52436 TAELQEELSGEK 12 1 0 Unmodified _TAELQEELSGEK_ 0 0 0 P49454;Q9UHT7;A0A087WTY4 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.334 2 667.327721 1332.64089 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.647 1 49.647 49.147 50.147 -3.8147E-06 0 0 0 0.00013179 1 27324 88.681 49.659 1 33644 1581 12753 13106 52437 52437 TAELQEELSGEK 12 1 0 Unmodified _TAELQEELSGEK_ 0 0 0 P49454;Q9UHT7;A0A087WTY4 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3353 2 667.327721 1332.64089 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.686 1 49.686 49.186 50.186 -3.8147E-06 0 0 0 0.0002016 1 27356 85.154 46.132 1 33645 1581 12753 13106 52438 52438 TAELQEELSGEK 12 1 0 Unmodified _TAELQEELSGEK_ 0 0 0 P49454;Q9UHT7;A0A087WTY4 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3375 2 667.327721 1332.64089 74025.82 0.7401 0.00049389 0.33137 0.00022114 1.0715 0.00071502 667.328416163609 671.334072638042 48.636 1.0359 48.636 48.202 49.238 0 245 80 5 0 0 0 1.5921E-12 2 27130 127.42 95.489 1 0.70919 0.77911 0 41862000 23920000 17942000 33646 1581 12753 13106 52439;52440 52440 TAEPLLDK 8 1 0 Unmodified _TAEPLLDK_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 447.7549 2 443.74765 885.480748 90672.66 0.20951 9.297E-05 0.73892 0.00032789 0.94843 0.00042086 443.747588692186 447.754845384211 38.463 0.75616 38.463 38.086 38.842 -3.8147E-06 214 63 6 0 0 0 0.036154 1 19635 48.794 30.946 1 1.008 1.0284 0 28179000 10952000 17227000 33647 2143 12754 13107 52441 52441 TAEPLLDK 8 1 0 Unmodified _TAEPLLDK_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.7548 2 443.74765 885.480748 92311.17 -0.10074 -4.4701E-05 0.11127 4.9376E-05 0.010534 4.6745E-06 443.747524694147 447.754698618144 37.662 0.71993 37.662 37.238 37.958 0 229 58 5 0 0 0 0.03177 1 19432 51.066 41.155 1 1.1871 1.2767 0 37614000 16590000 21024000 33648 2143 12754 13107 52442 52442 TAESQTPTPSATSFFSGK 18 1 0 Unmodified _TAESQTPTPSATSFFSGK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.4404 2 922.439063 1842.86357 63285.77 0.92575 0.00085395 -0.066049 -6.0926E-05 0.8597 0.00079302 922.940216020066 926.44607724784 81.894 0.5573 81.894 81.709 82.267 0 233 47 7 0 0 0 2.9137E-05 2 48811 89.231 89.231 1 1.7584 1.8798 0 32273000 12356000 19917000 33649 5 12755 13108 52443;52444 52443 TAESQTPTPSATSFFSGK 18 1 0 Unmodified _TAESQTPTPSATSFFSGK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 926.4467 2 922.439063 1842.86357 63698.18 0.82959 0.00076524 0.14923 0.00013766 0.97882 0.0009029 922.439373437746 926.94789005065 80.969 0.55357 80.969 80.719 81.272 0 245 46 8 0 0 0 4.1272E-40 2 49349 161.76 161.76 1 1.6458 1.6779 0 30999000 13542000 17457000 33650 5 12755 13108 52445;52446 52446 TAFDDAIAELDTLNEDSYK 19 1 0 Unmodified _TAFDDAIAELDTLNEDSYK_ 0 0 0 B4DE78;B3KNB4;P61981;B4DHC4 B4DE78 B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1069.9938 2 1065.98931 2129.96407 57639.14 0.86996 0.00092737 -1.0002 -0.0010662 -0.13023 -0.00013882 1065.98864803096 1069.99512547945 122.97 0.44696 122.97 122.78 123.23 0 100 32 5 0 0 0 1.662E-05 1 81601 89.231 83.952 1 3.0524 3.0644 0 13718000 3037200 10681000 33651 912 12756 13109 52447 52447 TAFDEAIAELDTLNEDSYK 19 1 0 Unmodified _TAFDEAIAELDTLNEDSYK_ 0 0 0 P27348;Q53S41;B4DMT8;B4DY04 P27348 P27348 YWHAQ 14-3-3 protein theta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1077.0048 2 1072.99714 2143.97972 57240.75 0.20061 0.00021525 0.80826 0.00086726 1.0089 0.0010825 1073.49858694181 1077.00586407278 124.89 0.69229 124.89 124.47 125.16 0 203 47 9 0 0 0 1.5462E-05 2 81157 90.759 90.759 1 2.4311 2.5121 0 14673000 5115000 9557600 33652 1523 12757 13110 52448;52449 52448 TAFDEAIAELDTLNEDSYK 19 1 0 Unmodified _TAFDEAIAELDTLNEDSYK_ 0 0 0 P27348;Q53S41;B4DMT8;B4DY04 P27348 P27348 YWHAQ 14-3-3 protein theta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1077.5054 2 1072.99714 2143.97972 58205.8 0.72944 0.00078268 0.36562 0.00039231 1.0951 0.001175 1072.99731851447 1077.00526426289 124.62 0.55988 124.62 124.29 124.85 0 174 35 8 0 0 0 2.1277E-05 1 82871 86.803 83.936 1 2.3782 2.4469 0 18009000 5932900 12076000 33653 1523 12757 13110 52450 52450 TAFDEAIAELDTLNEESYK 19 1 0 Unmodified _TAFDEAIAELDTLNEESYK_ 0 0 0 V9HWD6;P31946 V9HWD6 V9HWD6 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1084.0115 2 1080.00496 2157.99537 58732.88 0.53868 0.00058178 0.19504 0.00021065 0.73372 0.00079243 1081.01172423351 1084.51268382844 125.31 0.39462 125.31 125.05 125.45 7.6294E-06 111 26 7 0 0 0 2.3956E-05 2 81358 59.607 58.798 1 1.6151 1.6385 0 6015200 2613800 3401400 33654 1536 12758 13111 52451;52452 52451 TAFDEAIAELDTLNEESYK 19 1 0 Unmodified _TAFDEAIAELDTLNEESYK_ 0 0 0 V9HWD6;P31946 V9HWD6 V9HWD6 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1084.0105 2 1080.00496 2157.99537 58536.94 0.83775 0.00090477 -0.54808 -0.00059193 0.28966 0.00031284 1080.00481743115 1084.51301949235 124.98 0.40498 124.98 124.77 125.17 0 118 29 7 0 0 0 0.00055787 1 83145 38.799 38.799 1 2.2582 2.2754 0 7377500 1763000 5614500 33655 1536 12758 13111 52453 52453 TAFDEAIAELDTLSEESYK 19 1 0 Unmodified _TAFDEAIAELDTLSEESYK_ 0 0 0 D0PNI1;P63104;B0AZS6;E7EX29;B7Z2E6;H0YB80;Q2F831 D0PNI1 D0PNI1 YWHAZ 14-3-3 protein zeta/delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1070.5063 2 1066.49951 2130.98448 58824.87 0.666 0.00071029 -0.30206 -0.00032214 0.36394 0.00038814 1066.4994107711 1071.0084005634 131.92 0.50749 131.92 131.65 132.16 0 114 32 5 0 0 0 1.1291E-16 2 86051 116.63 116.63 1 2.1447 2.2064 0 10739000 4951400 5788100 33656 1182 12759 13112 52454;52455 52454 TAFDEAIAELDTLSEESYK 19 1 0 Unmodified _TAFDEAIAELDTLSEESYK_ 0 0 0 D0PNI1;P63104;B0AZS6;E7EX29;B7Z2E6;H0YB80;Q2F831 D0PNI1 D0PNI1 YWHAZ 14-3-3 protein zeta/delta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1070.5048 2 1066.49951 2130.98448 60607.48 0.7291 0.00077758 -0.54758 -0.000584 0.18151 0.00019358 1067.00011449756 1071.00769180794 131.56 0.49319 131.56 131.33 131.82 0 150 37 8 0 0 0 1.3801E-16 3 87929 114.7 114.7 1 2.0183 2.1098 0 10210000 3686800 6523500 33657 1182 12759 13112 52456;52457;52458 52457 TAFFHVCTQNPQDSQWDR 18 0 1 Unmodified _TAFFHVCTQNPQDSQWDR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.0034 3 746.332476 2235.9756 70436.63 0.50702 0.00037841 -0.2203 -0.00016442 0.28673 0.00021399 746.666395393103 750.002718642374 78.442 0.56114 78.442 78.163 78.724 0 181 48 5 0 0 0 1.0217E-05 1 46400 64.275 64.275 1 1.1523 1.2099 0 11843000 6346700 5496400 33658 1914 12760 13113 52459 52459 TAFGIISTVK 10 1 0 Unmodified _TAFGIISTVK_ 0 0 0 Q5VU10;P78346 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.8119 2 518.8055 1035.59645 87537.36 0.50103 0.00025994 -0.17999 -9.3382E-05 0.32104 0.00016656 518.80527026355 522.812577635695 85.187 0.42108 85.187 85.02 85.441 0 97 33 6 0 0 0 0.0025542 1 51205 68.557 53.297 1 1.668 1.7427 0 16727000 6621800 10105000 33659 1663 12761 13114 52460 52460 TAFGIISTVK 10 1 0 Unmodified _TAFGIISTVK_ 0 0 0 Q5VU10;P78346 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.8142 2 518.8055 1035.59645 86646.6 0.58125 0.00030156 -0.039681 -2.0587E-05 0.54157 0.00028097 518.805467570053 522.812536019424 84.163 0.41647 84.163 83.946 84.362 0 89 33 4 0 0 0 0.0019426 1 51611 71.349 59.302 1 1.7019 1.7462 0 17723000 5708600 12014000 33660 1663 12761 13114 52461 52461 TAFQEALDAAGDK 13 1 0 Unmodified _TAFQEALDAAGDK_ 0 0 0 H9ZYJ2;P10599 H9ZYJ2 H9ZYJ2 TXN Thioredoxin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8229 2 668.822606 1335.63066 76335.59 0.61813 0.00041342 -0.0096208 -6.4346E-06 0.6085 0.00040698 668.822285967744 672.829926106592 72.986 0.72189 72.986 72.526 73.248 0 203 57 6 0 0 0 1.8864E-13 2 42691 129.89 129.89 1 1.825 1.8017 0 25256000 12441000 12814000 33661 1318 12762 13115 52462;52463 52462 TAFQEALDAAGDK 13 1 0 Unmodified _TAFQEALDAAGDK_ 0 0 0 H9ZYJ2;P10599 H9ZYJ2 H9ZYJ2 TXN Thioredoxin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 672.8286 2 668.822606 1335.63066 77311.98 0.45933 0.00030721 0.11447 7.656E-05 0.5738 0.00038377 668.822750582834 672.829698888455 71.659 0.71349 71.659 71.42 72.134 -7.6294E-06 175 59 6 0 0 0 5.7364E-09 2 43040 119.45 110.98 1 1.5234 1.5532 0 31003000 11388000 19615000 33662 1318 12762 13115 52464;52465 52465 TAFQEALDAAGDK 13 1 0 Unmodified _TAFQEALDAAGDK_ 0 0 0 H9ZYJ2;P10599 H9ZYJ2 H9ZYJ2 TXN Thioredoxin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.8215 2 668.822606 1335.63066 NaN NaN NaN -0.14181 -9.4843E-05 NaN NaN NaN NaN 83.912 0.43631 83.912 83.61 84.046 -7.6294E-06 0 0 0 0.0026427 1 45763 68.355 62.574 1 NaN NaN 0 2678600 2678600 0 33663 1318 12762 13115 52466 52466 TAFQEALDAAGDK 13 1 0 Unmodified _TAFQEALDAAGDK_ 0 0 0 H9ZYJ2;P10599 H9ZYJ2 H9ZYJ2 TXN Thioredoxin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.8235 2 668.822606 1335.63066 76189.84 0.71955 0.00048125 -0.25009 -0.00016726 0.46946 0.00031399 668.82249251246 672.829521424151 84.079 0.58752 84.079 83.862 84.449 0 129 47 4 0 0 0 0.00027041 1 45040 67.08 62.781 1 0.72822 0.56666 0 3560600 1915500 1645200 33664 1318 12762 13115 52467 52467 TAFVMLLR 8 0 1 Oxidation (M) _TAFVM(ox)LLR_ TAFVM(1)LLR TAFVM(40.1)LLR 0 1 0 Q86XI2;B3KRQ2;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.7761 2 483.775688 965.536823 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.813 1 89.813 89.313 90.313 0 0 0 0 0.05362 1 54221 40.103 15.917 1 33665 1887 12763 13116 52468 52468 1733 TAFVMLLR 8 0 1 Oxidation (M) _TAFVM(ox)LLR_ TAFVM(1)LLR TAFVM(53.35)LLR 0 1 0 Q86XI2;B3KRQ2;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7806 2 483.775688 965.536823 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.313 1 90.313 89.813 90.813 0 0 0 0 0.024806 1 54561 53.351 33.991 1 33666 1887 12763 13116 52469 52469 1733 TAFVMLLR 8 0 1 Oxidation (M) _TAFVM(ox)LLR_ TAFVM(1)LLR TAFVM(45.95)LLR 0 1 0 Q86XI2;B3KRQ2;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7809 2 483.775688 965.536823 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.427 1 90.427 89.927 90.927 0 0 0 0 0.035435 1 54645 45.952 27.17 1 33667 1887 12763 13116 52470 52470 1733 TAFVMLLR 8 0 1 Oxidation (M) _TAFVM(ox)LLR_ TAFVM(1)LLR TAFVM(57.28)LLR 0 1 0 Q86XI2;B3KRQ2;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.776 2 483.775688 965.536823 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.564 1 88.564 88.064 89.064 0 0 0 0 0.019162 1 54623 57.281 15.629 1 33668 1887 12763 13116 52471 52471 1733 TAFVMLLR 8 0 1 Oxidation (M) _TAFVM(ox)LLR_ TAFVM(1)LLR TAFVM(54.2)LLR 0 1 0 Q86XI2;B3KRQ2;F8WE06 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.7798 2 483.775688 965.536823 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.037 1 89.037 88.537 89.537 0 0 0 0 0.02358 1 54932 54.205 36.819 1 33669 1887 12763 13116 52472 52472 1733 TAFYNEDDSEEEQR 14 0 1 Unmodified _TAFYNEDDSEEEQR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.3585 2 866.850278 1731.686 66970.15 0.91488 0.00079306 -0.0097776 -8.4757E-06 0.9051 0.00078459 867.351761229386 872.355656594319 37.406 0.466 37.406 37.217 37.683 0 115 38 4 0 0 0 7.4152E-05 4 19004 89.403 88.152 1 0.76696 0.80514 0 11891000 6490900 5399900 33670 1942 12764 13117 52473;52474;52475;52476 52474 TAFYNEDDSEEEQR 14 0 1 Unmodified _TAFYNEDDSEEEQR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.853 2 866.850278 1731.686 66438.13 0.94193 0.00081651 0.1365 0.00011833 1.0784 0.00093484 866.850576805213 871.854530236665 36.532 0.44491 36.532 36.362 36.807 0 118 34 5 0 0 0 3.8972E-05 2 18751 94.767 93.516 1 0.69954 0.69714 0 11682000 7038600 4643700 33671 1942 12764 13117 52477;52478 52478 TAFYNEDDSEEEQR 14 0 1 Unmodified _TAFYNEDDSEEEQR_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 866.851 2 866.850278 1731.686 65719.2 0.23459 0.00020336 0.23778 0.00020612 0.47237 0.00040948 866.850472963288 871.854730434339 43.696 0.7233 43.696 43.425 44.148 0 195 47 6 0 0 0 0.038216 1 20044 28.806 28.806 1 1.3339 1.1478 0 2776800 1234100 1542700 33672 1942 12764 13117 52479 52479 TAGAPTGTVPQQLQVHGVQQSVPVTQER 28 0 1 Unmodified _TAGAPTGTVPQQLQVHGVQQSVPVTQER_ 0 0 0 P22670 P22670 P22670 RFX1 MHC class II regulatory factor RFX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 975.5142 3 971.844087 2912.51043 61915.34 0.21888 0.00021272 0.036486 3.5458E-05 0.25536 0.00024817 972.178377716587 975.514745024561 91.11 0.40597 91.11 90.913 91.318 0 184 24 10 0 0 0 0.00019484 2 50549 33.265 33.265 1 0.92913 0.79945 0 7552100 3166400 4385800 33673 1509 12765 13118 52480;52481 52481 TAGAPTGTVPQQLQVHGVQQSVPVTQER 28 0 1 Unmodified _TAGAPTGTVPQQLQVHGVQQSVPVTQER_ 0 0 0 P22670 P22670 P22670 RFX1 MHC class II regulatory factor RFX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 971.8466 3 971.844087 2912.51043 62260.53 0.00061962 6.0217E-07 0.0027627 2.6849E-06 0.0033823 3.2871E-06 972.178373989108 975.514820529375 90.85 0.44017 90.85 90.648 91.088 0 161 23 10 0 0 0 0.02392 2 49517 16.621 16.621 1 1.0482 0.87152 0 7514800 3138100 4376700 33674 1509 12765 13118 52482;52483 52482 TAGDGWFGMK 10 1 0 Oxidation (M) _TAGDGWFGM(ox)K_ TAGDGWFGM(1)K TAGDGWFGM(43.63)K 0 1 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.2474 2 543.239667 1084.46478 NaN NaN NaN -0.30222 -0.00016418 NaN NaN NaN NaN 53.971 0.54488 53.971 53.704 54.249 0 0 0 0 0.01931 1 30435 43.635 35.695 1 NaN NaN 0 8029600 0 8029600 33675 1813 12766 13119 52484 52484 1675 TAGDGWFGMK 10 1 0 Oxidation (M) _TAGDGWFGM(ox)K_ TAGDGWFGM(1)K TAGDGWFGM(46.45)K 0 1 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.2391 2 543.239667 1084.46478 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.869 1 53.869 53.369 54.369 -3.8147E-06 0 0 0 0.019107 1 30206 46.447 37.584 1 33676 1813 12766 13119 52485 52485 1675 TAGDGWFGMK 10 1 0 Oxidation (M) _TAGDGWFGM(ox)K_ TAGDGWFGM(1)K TAGDGWFGM(41.03)K 0 1 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.247 2 543.239667 1084.46478 84809.2 0.37896 0.00020587 -0.084932 -4.6138E-05 0.29403 0.00015973 543.239655201127 547.246664621417 62.049 0.68783 62.049 61.836 62.524 0 120 51 4 0 0 0 0.016669 1 31125 41.029 41.029 1 1.0992 0.96723 0 1151100 586430 564690 33677 1813 12766 13119 52486 52486 1675 TAGLVMTHLILK 12 1 0 Oxidation (M) _TAGLVM(ox)THLILK_ TAGLVM(1)THLILK TAGLVM(66.19)THLILK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.8939 2 656.886498 1311.75844 NaN NaN NaN -0.92768 -0.00060938 NaN NaN NaN NaN 73.854 0.15887 73.854 73.726 73.885 7.6294E-06 0 0 0 0.001003 1 43247 66.19 53.954 1 NaN NaN 0 7143900 0 7143900 33678 908 12767 13120 52487 52487 748 TAGLVMTHLILK 12 1 0 Oxidation (M) _TAGLVM(ox)THLILK_ TAGLVM(1)THLILK TAGLVM(68.66)THLILK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.3367 2 656.886498 1311.75844 NaN NaN NaN -0.36458 -0.00023949 NaN NaN NaN NaN 73.96 0.21741 73.96 73.885 74.103 0 0 0 0 0.00070447 1 43345 68.657 56.431 1 NaN NaN 0 5295300 0 5295300 33679 908 12767 13120 52488 52488 748 TAGLVMTHLILK 12 1 0 Unmodified _TAGLVMTHLILK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 652.8964 2 648.889041 1295.76353 76160.56 0.74992 0.00048662 0.058065 3.7678E-05 0.80799 0.00052429 648.88889752348 652.896492237409 105.1 1.3525 105.1 104.89 106.24 0 235 79 7 0 0 0 0.00023021 1 59903 99.343 99.343 1 1.7107 1.3703 0 7322900 3098800 4224100 33680 908 12767 13121 52489 52489 TAGLVMTHLILK 12 1 0 Unmodified _TAGLVMTHLILK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.8966 2 648.889041 1295.76353 76061.53 0.5667 0.00036773 0.11514 7.4711E-05 0.68184 0.00044244 648.889025862603 652.896280546465 104.75 0.77889 104.75 104.42 105.2 7.6294E-06 200 45 6 0 0 0 0.0014498 1 58820 64.82 64.82 1 1.6837 1.3763 0 8233900 2883200 5350700 33681 908 12767 13121 52490 52490 TAGNSEFLGK 10 1 0 Unmodified _TAGNSEFLGK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;H0YCH5;H0YEC5;H0YD77;H0YEN8;H0YDC0;H0YCF8;H0YD99 D3DQV9 D3DQV9 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.2579 2 512.258914 1022.50327 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.123 1 32.123 31.623 32.623 -3.8147E-06 0 0 0 0.029066 1 15968 50.805 22.631 1 33682 1054 12768 13122 52491 52491 TAGPLESSETEEASQLK 17 1 0 Unmodified _TAGPLESSETEEASQLK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5;B3KSG1;A0A087WU26 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.9298 2 888.928528 1775.8425 NaN NaN NaN -1.3619 -0.0012107 NaN NaN NaN NaN 59.398 0.17472 59.398 59.302 59.476 0 0 0 0 0.0032554 1 33816 53.136 35.769 1 NaN NaN 0 4725700 4725700 0 33683 471 12769 13123 52492 52492 TAGPLESSETEEASQLK 17 1 0 Unmodified _TAGPLESSETEEASQLK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5;B3KSG1;A0A087WU26 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 889.4315 2 888.928528 1775.8425 NaN NaN NaN -0.15841 -0.00014081 NaN NaN NaN NaN 59.638 0.15055 59.638 59.529 59.68 0 0 0 0 9.5882E-05 1 33937 69.345 55.917 1 NaN NaN 0 6188900 6188900 0 33684 471 12769 13123 52493 52493 TAGPLESSETEEASQLK 17 1 0 Unmodified _TAGPLESSETEEASQLK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5;B3KSG1;A0A087WU26 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.9373 2 888.928528 1775.8425 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.383 1 59.383 58.883 59.883 0 0 0 0 0.00047284 1 33818 64.224 50.067 1 33685 471 12769 13123 52494 52494 TAGPLESSETEEASQLK 17 1 0 Unmodified _TAGPLESSETEEASQLK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5;B3KSG1;A0A087WU26 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.9354 2 888.928528 1775.8425 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.652 1 58.652 58.152 59.152 0 0 0 0 1.0152E-12 1 34114 116.51 100.37 1 33686 471 12769 13123 52495 52495 TAGPLESSETEEASQLK 17 1 0 Unmodified _TAGPLESSETEEASQLK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5;B3KSG1;A0A087WU26 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.9296 2 888.928528 1775.8425 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.717 1 58.717 58.217 59.217 0 0 0 0 2.3719E-05 1 34151 89.46 73.596 1 33687 471 12769 13123 52496 52496 TAGPLESSETEEASQLK 17 1 0 Unmodified _TAGPLESSETEEASQLK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5;B3KSG1;A0A087WU26 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 892.9333 2 888.928528 1775.8425 NaN NaN NaN -2.028 -0.0018028 NaN NaN NaN NaN 69.882 0.39014 69.882 69.688 70.078 0 0 0 0 0.033583 1 36593 36.284 23.724 1 NaN NaN 0 1943900 0 1943900 33688 471 12769 13123 52497 52497 TAGTLFGEGFR 11 0 1 Unmodified _TAGTLFGEGFR_ 0 0 0 Q9NVI7;H0Y2W2;Q96T67;Q5T9A4;Q9H834 Q9NVI7 Q9NVI7 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.2948 2 578.293288 1154.57202 NaN NaN NaN -1.292 -0.00074714 NaN NaN NaN NaN 82.83 0.71532 82.83 82.296 83.012 0 0 0 0 5.2616E-08 2 49451 111.06 85.498 1 NaN NaN 0 11117000 11117000 0 33689 2074 12770 13124 52498;52499 52498 TAGTLFGEGFR 11 0 1 Unmodified _TAGTLFGEGFR_ 0 0 0 Q9NVI7;H0Y2W2;Q96T67;Q5T9A4;Q9H834 Q9NVI7 Q9NVI7 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.2964 2 578.293288 1154.57202 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.589 1 82.589 82.089 83.089 0 0 0 0 3.7696E-05 1 49345 85.807 66.021 1 33690 2074 12770 13124 52500 52500 TAGTLFGEGFR 11 0 1 Unmodified _TAGTLFGEGFR_ 0 0 0 Q9NVI7;H0Y2W2;Q96T67;Q5T9A4;Q9H834 Q9NVI7 Q9NVI7 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.2964 2 578.293288 1154.57202 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.667 1 82.667 82.167 83.167 0 0 0 0 3.6371E-05 1 49405 86.18 62.025 1 33691 2074 12770 13124 52501 52501 TAGTLFGEGFR 11 0 1 Unmodified _TAGTLFGEGFR_ 0 0 0 Q9NVI7;H0Y2W2;Q96T67;Q5T9A4;Q9H834 Q9NVI7 Q9NVI7 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.2988 2 578.293288 1154.57202 NaN NaN NaN -1.1867 -0.00068626 NaN NaN NaN NaN 81.468 0.70749 81.468 81.238 81.945 7.6294E-06 0 0 0 0.0017076 1 49686 81.338 64.798 1 NaN NaN 0 17761000 0 17761000 33692 2074 12770 13124 52502 52502 TAHLDEEVNK 10 1 0 Unmodified _TAHLDEEVNK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.2932 2 578.28566 1154.55677 NaN NaN NaN -0.11137 -6.4406E-05 NaN NaN NaN NaN 19.814 0.1965 19.814 19.736 19.933 0 0 0 0 0.0021109 1 6346 82.287 70.051 1 NaN NaN 0 9498300 0 9498300 33693 196 12771 13125 52503 52503 TAHLDEEVNK 10 1 0 Unmodified _TAHLDEEVNK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.2925 2 578.28566 1154.55677 NaN NaN NaN -0.28471 -0.00016465 NaN NaN NaN NaN 19.43 0.28756 19.43 19.31 19.597 0 0 0 0 3.7939E-11 1 5868 120.27 104.61 1 NaN NaN 0 6460900 0 6460900 33694 196 12771 13125 52504 52504 TAICNLILGNPPSK 14 1 0 Unmodified _TAICNLILGNPPSK_ 0 0 0 B2R823;Q9NRX1 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.4088 2 749.408326 1496.8021 71117.02 0.84577 0.00063383 -0.28026 -0.00021003 0.56551 0.0004238 749.408315848634 753.41547687163 95.823 0.73557 95.823 95.452 96.187 0 241 63 6 0 0 0 0.00015583 2 58239 75.78 75.78 1 0.84753 0.88616 0 30032000 16538000 13495000 33695 858 12772 13126 52505;52506 52506 TAICNLILGNPPSK 14 1 0 Unmodified _TAICNLILGNPPSK_ 0 0 0 B2R823;Q9NRX1 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.4088 2 749.408326 1496.8021 70510.86 0.61099 0.00045788 -0.17846 -0.00013374 0.43253 0.00032414 749.909726309388 753.41538955075 94.902 0.69207 94.902 94.602 95.294 0 204 59 6 0 0 0 3.3454E-14 3 59050 127.17 127.17 1 0.97486 1.044 0 37077000 19754000 17322000 33696 858 12772 13126 52507;52508;52509 52509 TAISLFEGK 9 1 0 Unmodified _TAISLFEGK_ 0 0 0 Q9H981;H0Y849 Q9H981 Q9H981 ACTR8 Actin-related protein 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.2695 2 483.26875 964.522947 NaN NaN NaN 1.4578 0.00070451 NaN NaN NaN NaN 76.42 0.56613 76.42 76.117 76.683 0 0 0 0 0.010129 1 46077 66.621 33.781 1 NaN NaN 0 4811900 4811900 0 33697 2044 12773 13127 52510 52510 TAITVEHLAIK 11 1 0 Unmodified _TAITVEHLAIK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.3562 2 598.355888 1194.69722 78818.22 0.49328 0.00029516 0.078879 4.7198E-05 0.57216 0.00034235 598.355820712959 602.36298591828 64.469 1.0735 64.469 64.065 65.138 0 507 93 8 0 0 0 0.002543 2 36867 61.65 54.59 1 1.1115 1.2569 0 146410000 73385000 73025000 33698 2065 12774 13128 52511;52512 52511 TAITVEHLAIK 11 1 0 Unmodified _TAITVEHLAIK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.3632 2 598.355888 1194.69722 78759.75 0.50357 0.00030132 0.068102 4.0749E-05 0.57167 0.00034206 598.35585926899 602.362932642807 62.761 1.0918 62.761 62.236 63.328 0 521 97 8 0 0 0 4.1741E-08 2 36699 142.98 127.72 1 1.1197 1.2695 0 138310000 64241000 74066000 33699 2065 12774 13128 52513;52514 52513 TAITVEHLAIK 11 1 0 Unmodified _TAITVEHLAIK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 598.3562 2 598.355888 1194.69722 78061.01 0.63109 0.00037761 -0.027128 -1.6232E-05 0.60396 0.00036138 598.355829372897 602.362852000618 74.047 1.4085 74.047 73.648 75.057 0 480 98 9 0 0 0 0.016544 1 39132 43.651 35.118 1 1.2639 1.0387 0 38535000 16231000 22304000 33700 2065 12774 13128 52515 52515 TAITVEHLAIK 11 1 0 Unmodified _TAITVEHLAIK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.3632 2 598.355888 1194.69722 78165.92 0.54151 0.00032402 -0.054817 -3.28E-05 0.48669 0.00029122 598.355825232392 602.362839310367 74.238 1.3476 74.238 73.857 75.204 0 437 89 8 0 0 0 0.0032941 1 38431 75.652 75.652 1 1.2142 1.0193 0 48827000 22017000 26811000 33701 2065 12774 13128 52516 52516 TALAATNPAVR 11 0 1 Unmodified _TALAATNPAVR_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.8134 2 542.809105 1083.60366 83547.29 0.91785 0.00049822 -1.1308 -0.00061379 -0.21292 -0.00011558 542.809146153383 547.813018906954 38.873 0.52483 38.873 38.556 39.081 0 124 43 5 0 0 0 0.0067996 1 19960 53.756 42.592 1 1.1199 1.1768 0 11599000 5363900 6235200 33702 1725 12775 13129 52517 52517 TALAATNPAVR 11 0 1 Unmodified _TALAATNPAVR_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.8137 2 542.809105 1083.60366 84211.95 0.37776 0.00020505 -0.2575 -0.00013978 0.12025 6.5274E-05 542.809037870655 547.813544472079 37.914 0.26714 37.914 37.765 38.032 0 66 19 5 0 0 0 0.00059163 1 19778 73.985 44.512 1 0.94282 0.95849 0 20435000 10111000 10323000 33703 1725 12775 13129 52518 52518 TALAATNPAVR 11 0 1 Unmodified _TALAATNPAVR_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 547.8146 2 542.809105 1083.60366 81236.2 0.59095 0.00032077 -0.0059008 -3.203E-06 0.58505 0.00031757 542.808773829664 547.813627386833 44.135 0.47742 44.135 43.986 44.463 0 88 29 4 0 0 0 0.0020963 1 20358 62.463 48.256 1 1.7056 1.4724 0 1175500 412110 763390 33704 1725 12775 13129 52519 52519 TALALAIAQELGSK 14 1 0 Unmodified _TALALAIAQELGSK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.4111 2 693.403566 1384.79258 73801.72 1.0113 0.00070122 0.31482 0.0002183 1.3261 0.00091952 693.403717000589 697.410983864068 128.25 1.347 128.25 127.83 129.18 0 307 58 8 0 0 0 5.5505E-05 2 77393 92.247 92.247 1 1.1149 0.88654 0 19327000 9658000 9668600 33705 1076 12776 13130 52520;52521 52521 TALALAIAQELGSK 14 1 0 Unmodified _TALALAIAQELGSK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.4039 2 693.403566 1384.79258 73274.14 0.73859 0.00051214 0.32477 0.0002252 1.0634 0.00073734 693.403726029981 697.410786670621 127.97 1.2371 127.97 127.68 128.92 0 267 50 8 0 0 0 0.0097383 1 76205 36.847 36.847 1 1.0482 0.86372 0 29400000 13886000 15513000 33706 1076 12776 13130 52522 52522 TALENLIVLLK 11 1 0 Unmodified _TALENLIVLLK_ 0 0 0 G3V4V5;H0YJP0;A0A087X2H1;Q9ULT8 G3V4V5 G3V4V5 HECTD1 E3 ubiquitin-protein ligase HECTD1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.8961 2 613.889564 1225.76457 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.54 1 129.54 129.04 130.04 1.5259E-05 0 0 0 9.0297E-05 1 84416 81.972 54.668 1 33707 453 12777 13131 52523 52523 TALFEEISR 9 0 1 Unmodified _TALFEEISR_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;Q68EN4;H0Y7K8;Q5H934 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.287 2 533.282389 1064.55022 83810.47 0.51788 0.00027617 0.20521 0.00010943 0.72309 0.00038561 533.282438727495 538.286539769361 79.072 0.8147 79.072 78.772 79.587 0 216 73 5 0 0 0 0.0056063 3 46768 66.299 46.302 1 0.84298 0.86012 0 30757000 16410000 14347000 33708 1739 12778 13132 52524;52525;52526 52525 TALFEEISR 9 0 1 Unmodified _TALFEEISR_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;Q68EN4;H0Y7K8;Q5H934 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.2831 2 533.282389 1064.55022 84697.45 0.52174 0.00027823 0.14065 7.5008E-05 0.66239 0.00035324 533.282311321689 538.286520739604 77.983 0.66463 77.983 77.663 78.328 0 214 55 5 0 0 0 0.0022085 2 47212 75.378 43.562 1 0.85659 0.92283 0 25893000 15487000 10407000 33709 1739 12778 13132 52527;52528 52528 TALFEEISR 9 0 1 Unmodified _TALFEEISR_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;Q68EN4;H0Y7K8;Q5H934 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.287 2 533.282389 1064.55022 83827.2 0.37727 0.00020119 0.19831 0.00010576 0.57558 0.00030695 533.282317166012 538.286657702578 90.112 0.88139 90.112 89.716 90.598 0 172 60 4 0 0 0 0.023107 1 49904 48.794 30.886 1 1.319 1.1421 0 2577100 1067900 1509200 33710 1739 12778 13132 52529 52529 TALFEEISR 9 0 1 Unmodified _TALFEEISR_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;Q68EN4;H0Y7K8;Q5H934 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.2866 2 533.282389 1064.55022 84015.38 0.32762 0.00017472 0.29882 0.00015935 0.62644 0.00033407 533.282392550411 538.286627306081 90.072 0.68552 90.072 89.764 90.449 7.6294E-06 142 46 5 0 0 0 0.017039 1 49064 53.327 36.551 1 1.2698 1.1462 0 2218600 951940 1266600 33711 1739 12778 13132 52530 52530 TALGDIGNK 9 1 0 Unmodified _TALGDIGNK_ 0 0 0 P14635;E9PC90;H1UBN2;D6RHI0 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 444.7436 2 444.742899 887.471246 91797.91 0.12109 5.3854E-05 -0.17143 -7.6244E-05 -0.050346 -2.2391E-05 444.742780418325 448.749659591059 32.171 0.70664 32.171 31.79 32.497 -3.8147E-06 199 66 6 0 0 0 0.0095109 1 16060 60.118 6.2402 1 0.72116 0.7669 0 36265000 20641000 15624000 33712 1483 12779 13133 52531 52531 TALGDIGNK 9 1 0 Unmodified _TALGDIGNK_ 0 0 0 P14635;E9PC90;H1UBN2;D6RHI0 P14635 P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.7495 2 444.742899 887.471246 94099.55 -0.11556 -5.1396E-05 -0.16791 -7.4675E-05 -0.28347 -0.00012607 444.742934454778 448.749857788672 36.716 0.75303 36.716 36.431 37.184 0 233 66 5 0 0 0 0.03089 1 16405 45.68 20.861 1 1.3458 1.0674 0 4430300 1696500 2733800 33713 1483 12779 13133 52532 52532 TALHGESNSVLIIGPR 16 0 1 Unmodified _TALHGESNSVLIIGPR_ 0 0 0 A8K7H4;O43929;B7Z2M4;C9JGH7;C9J2X8;Q53SE3 A8K7H4 A8K7H4 ORC4;ORC4L Origin recognition complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.9794 3 555.309049 1662.90532 82286.78 0.34881 0.0001937 0.34928 0.00019396 0.69809 0.00038766 555.309340767574 558.645117280974 82.876 0.47331 82.876 82.687 83.16 7.6294E-06 128 28 6 0 0 0 0.02862 1 45074 20.048 20.048 1 1.4669 1.2713 0 2028300 689980 1338300 + 33714 772 12780 13134 52533 52533 TALIHDGLAR 10 0 1 Unmodified _TALIHDGLAR_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.804 2 533.803823 1065.59309 81361.03 0.5787 0.00030891 0.94819 0.00050615 1.5269 0.00081506 533.804078961084 538.808468980744 39.129 0.82425 39.129 38.803 39.628 0 260 66 7 0 0 0 0.0010535 2 20122 76.943 59.317 1 1.4135 1.6592 0 221450000 89993000 131460000 33715 1515 12781 13135 52534;52535 52535 TALIHDGLAR 10 0 1 Unmodified _TALIHDGLAR_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 356.2049 3 356.204974 1065.59309 99137.66 0.2029 7.2275E-05 -0.20799 -7.4086E-05 -0.0050856 -1.8115E-06 356.205001532123 359.540886119827 39.117 0.85664 39.117 38.78 39.637 0 368 69 8 0 0 0 0.0039626 1 20092 46.406 37.084 1 1.4392 1.7045 0 422650000 180450000 242200000 33716 1515 12781 13135 52536 52536 TALIHDGLAR 10 0 1 Unmodified _TALIHDGLAR_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 356.2047 3 356.204974 1065.59309 100032.6 0.045498 1.6207E-05 -0.11185 -3.984E-05 -0.066349 -2.3634E-05 356.204989796898 359.540987132896 37.652 0.8713 37.652 37.332 38.203 3.8147E-06 398 68 10 0 0 0 0.00020261 2 19468 74.267 62.031 1 1.4243 1.6591 0 447690000 186590000 261110000 33717 1515 12781 13135 52537;52538 52538 TALIHDGLAR 10 0 1 Unmodified _TALIHDGLAR_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.8082 2 533.803823 1065.59309 81959.04 0.33811 0.00018048 -0.068562 -3.6599E-05 0.26954 0.00014388 533.80377309289 538.807825422029 37.657 0.68175 37.657 37.35 38.032 0 312 53 9 0 0 0 2.8741E-08 2 19558 120.12 94.382 1 1.3985 1.6203 0 289470000 130530000 158950000 33718 1515 12781 13135 52539;52540 52539 TALIHDGLAR 10 0 1 Unmodified _TALIHDGLAR_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 359.5411 3 356.204974 1065.59309 98965.95 0.037273 1.3277E-05 -0.050155 -1.7865E-05 -0.012882 -4.5886E-06 356.204950514392 359.54096262768 44.018 0.86167 44.018 43.738 44.6 -3.8147E-06 300 59 8 0 0 0 0.024825 2 20798 28.177 22.585 1 1.4603 1.1964 0 12846000 5365100 7481300 33719 1515 12781 13135 52541;52542 52541 TALIHDGLAR 10 0 1 Unmodified _TALIHDGLAR_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 356.2048 3 356.204974 1065.59309 99767.12 -0.03098 -1.1035E-05 -0.08649 -3.0808E-05 -0.11747 -4.1844E-05 356.2049069616 359.540964712198 43.831 0.94627 43.831 43.532 44.478 0 293 60 8 0 0 0 0.05384 2 20260 22.686 17.991 1 1.4064 1.1382 0 11688000 5192800 6495300 33720 1515 12781 13135 52543;52544 52544 TALIHDGLAR 10 0 1 Unmodified _TALIHDGLAR_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.8032 2 533.803823 1065.59309 83933.91 0.46349 0.00024741 -0.22099 -0.00011796 0.2425 0.00012945 533.803546709858 538.807743638803 43.844 0.77772 43.844 43.546 44.324 0 230 51 6 0 0 0 0.0083024 2 20231 56.258 42.679 1 1.5033 1.2525 0 6335700 2441600 3894100 33721 1515 12781 13135 52545;52546 52546 TALILGGDR 9 0 1 Unmodified _TALILGGDR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.2706 2 458.266542 914.51853 87959.01 0.19692 9.0241E-05 -0.00037614 -1.7237E-07 0.19654 9.0069E-05 458.266651496649 463.270528992413 56.556 1.43 56.556 55.796 57.226 0 442 108 6 0 0 0 0.021536 1 32188 49.423 22.169 1 1.0784 1.2283 0 106030000 39733000 66296000 33722 1933 12782 13136 52547 52547 TALILGGDR 9 0 1 Unmodified _TALILGGDR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 463.2704 2 458.266542 914.51853 88934.72 -0.075753 -3.4715E-05 -0.5209 -0.00023871 -0.59665 -0.00027342 458.266275265847 463.270366367659 65.584 1.3487 65.584 65.025 66.374 0 241 99 4 0 0 0 0.041466 1 32981 41.448 12.299 1 1.2726 1.0944 0 2786400 1192400 1593900 33723 1933 12782 13136 52548 52548 TALINSTGEEVAMR 14 0 1 Oxidation (M) _TALINSTGEEVAM(ox)R_ TALINSTGEEVAM(1)R TALINSTGEEVAM(117.09)R 0 1 0 P02545;Q3BDU5;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.3782 2 754.37468 1506.73481 69299.33 0.40932 0.00030878 -0.14055 -0.00010602 0.26877 0.00020276 754.374737899184 759.378822755368 53.889 0.74051 53.889 53.543 54.283 0 372 58 9 0 0 0 1.0929E-09 2 30090 117.09 97.329 1 1.4683 1.7149 0 199760000 81651000 118110000 33724 1440 12783 13137 52549;52550 52550 1140 TALINSTGEEVAMR 14 0 1 Oxidation (M) _TALINSTGEEVAM(ox)R_ TALINSTGEEVAM(1)R TALINSTGEEVAM(138.99)R 0 1 0 P02545;Q3BDU5;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.3776 2 754.37468 1506.73481 69609.92 0.30231 0.00022805 -0.091029 -6.867E-05 0.21128 0.00015938 754.374918033528 759.378996943616 52.892 0.94782 52.892 52.409 53.357 0 608 78 12 0 0 0 3.23E-21 3 30092 138.99 119.23 1 1.457 1.6612 0 98789000 37872000 60917000 33725 1440 12783 13137 52551;52552;52553 52552 1140 TALINSTGEEVAMR 14 0 1 Oxidation (M) _TALINSTGEEVAM(ox)R_ TALINSTGEEVAM(1)R TALINSTGEEVAM(43.54)R 0 1 0 P02545;Q3BDU5;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.3785 2 754.37468 1506.73481 71138.87 0.32688 0.00024659 0.18342 0.00013836 0.5103 0.00038496 754.376121421636 759.378553847758 63.547 0.56107 63.547 63.257 63.818 0 232 52 6 0 0 0 0.0026988 1 31896 43.544 20.308 1 1.0844 0.94798 0 4216000 2091100 2124900 33726 1440 12783 13137 52554 52554 1140 TALINSTGEEVAMR 14 0 1 Unmodified _TALINSTGEEVAMR_ 0 0 0 P02545;Q3BDU5;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.3783 2 746.377223 1490.73989 NaN NaN NaN -0.13879 -0.00010359 NaN NaN NaN NaN 69.708 0.41711 69.708 69.482 69.899 0 0 0 0 0.00030528 1 41528 80.979 52.966 1 NaN NaN 0 3241800 3241800 0 33727 1440 12783 13138 52555 52555 TALINSTGEEVAMR 14 0 1 Unmodified _TALINSTGEEVAMR_ 0 0 0 P02545;Q3BDU5;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 746.3765 2 746.377223 1490.73989 70230.15 0.61412 0.00045836 0.096474 7.2006E-05 0.71059 0.00053037 746.377050329286 751.381561506144 81.348 0.58775 81.348 81.081 81.669 0 128 31 5 0 0 0 0.0058425 1 43148 43.084 34.13 1 1.7088 1.4177 0 5380800 1940100 3440800 33728 1440 12783 13138 52556 52556 TALINSTGEEVAMRK 15 1 1 Oxidation (M) _TALINSTGEEVAM(ox)RK_ TALINSTGEEVAM(1)RK TALINSTGEEVAM(140.01)RK 0 1 1 P02545;Q3BDU5;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.4221 2 818.422162 1634.82977 67872.77 0.7043 0.00057641 -0.22951 -0.00018783 0.47479 0.00038858 818.422143310271 827.433268426798 40.381 0.62576 40.381 40.061 40.687 0 215 54 6 0 0 0 1.9326E-21 1 21072 140.01 124.86 1 1.7449 2.0972 0 76659000 29777000 46883000 33729 1440 12784 13139 52557 52557 1140 TALINSTGEEVAMRK 15 1 1 Oxidation (M) _TALINSTGEEVAM(ox)RK_ TALINSTGEEVAM(1)RK TALINSTGEEVAM(75.57)RK 0 1 1 P02545;Q3BDU5;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.95 3 545.950533 1634.82977 NaN NaN NaN 0.30603 0.00016708 NaN NaN NaN NaN 40.386 0.73257 40.386 40.061 40.793 0 0 0 0 4.2443E-05 1 21062 75.574 64.295 1 NaN NaN 0 79132000 79132000 0 33730 1440 12784 13139 52558 52558 1140 TALINSTGEEVAMRK 15 1 1 Oxidation (M) _TALINSTGEEVAM(ox)RK_ TALINSTGEEVAM(1)RK TALINSTGEEVAM(88.73)RK 0 1 1 P02545;Q3BDU5;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.9578 3 545.950533 1634.82977 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.167 1 40.167 39.667 40.667 0 0 0 0 1.8784E-05 1 20960 88.73 69.406 1 33731 1440 12784 13139 52559 52559 1140 TALINSTGEEVAMRK 15 1 1 Oxidation (M) _TALINSTGEEVAM(ox)RK_ TALINSTGEEVAM(1)RK TALINSTGEEVAM(101.71)RK 0 1 1 P02545;Q3BDU5;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.9238 2 818.422162 1634.82977 67696.07 0.71419 0.00058451 -0.30676 -0.00025106 0.40743 0.00033345 818.42201924687 827.43319165029 39.289 0.45811 39.289 39.008 39.466 0 111 40 5 0 0 0 1.2388E-06 2 20801 101.71 86.739 1 1.7479 2.0576 0 83555000 32545000 51010000 33732 1440 12784 13139 52560;52561 52561 1140 TALINSTGEEVAMRK 15 1 1 Oxidation (M) _TALINSTGEEVAM(ox)RK_ TALINSTGEEVAM(1)RK TALINSTGEEVAM(89.47)RK 0 1 1 P02545;Q3BDU5;Q5TCI8;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.9504 3 545.950533 1634.82977 79471.45 0.51028 0.00027859 -0.35892 -0.00019595 0.15136 8.2635E-05 545.950679853415 551.957708148347 39.229 0.66735 39.229 38.908 39.576 0 335 57 8 0 0 0 5.0303E-06 2 20762 89.466 89.466 1 1.5066 1.7829 0 194260000 76331000 117930000 33733 1440 12784 13139 52562;52563 52563 1140 TALLAVK 7 1 0 Unmodified _TALLAVK_ 0 0 0 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 358.2391 2 358.239264 714.463976 104356 -0.20332 -7.2836E-05 0.58867 0.00021089 0.38536 0.00013805 358.239323752489 362.246545982898 50.182 0.50696 50.182 49.981 50.488 -3.8147E-06 113 48 5 0 0 0 0.034211 1 27706 62.714 18.294 1 0.69362 0.71873 0 14765000 8380700 6384700 33734 360 12785 13140 52564 52564 TALLAVK 7 1 0 Unmodified _TALLAVK_ 0 0 0 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 358.2388 2 358.239264 714.463976 103752.6 0.22699 8.1317E-05 0.2978 0.00010668 0.52479 0.000188 358.239237527423 362.246474812797 49.054 0.52818 49.054 48.801 49.329 3.8147E-06 139 45 5 0 0 0 0.037563 1 27512 60.788 16.368 1 0.58374 0.6323 0 22448000 13961000 8486600 33735 360 12785 13140 52565 52565 TALQEEIK 8 1 0 Unmodified _TALQEEIK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.2665 2 466.258382 930.502212 NaN NaN NaN 0.51645 0.0002408 NaN NaN NaN NaN 36.632 0.34515 36.632 36.504 36.849 0 0 0 0 0.011064 1 18511 75.854 31.407 1 NaN NaN 0 5656300 0 5656300 33736 352 12786 13141 52566 52566 TALQEEIK 8 1 0 Unmodified _TALQEEIK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.2658 2 466.258382 930.502212 NaN NaN NaN 0.25995 0.00012121 NaN NaN NaN NaN 35.759 0.63837 35.759 35.375 36.013 0 0 0 0 0.0097797 1 18287 77.923 21.832 1 NaN NaN 0 8924200 0 8924200 33737 352 12786 13141 52567 52567 TALTYYLDITNPPR 14 0 1 Unmodified _TALTYYLDITNPPR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8;B4E305 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.9387 2 819.430313 1636.84607 NaN NaN NaN 0.64361 0.00052739 NaN NaN NaN NaN 110.91 0.62166 110.91 110.62 111.24 0 0 0 0 3.9063E-06 1 69645 97.163 80.909 1 NaN NaN 0 5151400 0 5151400 33738 719 12787 13142 52568 52568 TALTYYLDITNPPR 14 0 1 Unmodified _TALTYYLDITNPPR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8;B4E305 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.4336 2 819.430313 1636.84607 NaN NaN NaN 1.0327 0.00084622 NaN NaN NaN NaN 110.14 0.68601 110.14 109.95 110.64 0 0 0 0 6.534E-15 1 70814 121.08 96.694 1 NaN NaN 0 8611600 0 8611600 33739 719 12787 13142 52569 52569 TALTYYLDITNPPR 14 0 1 Unmodified _TALTYYLDITNPPR_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8;B4E305 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 824.4387 2 819.430313 1636.84607 NaN NaN NaN 0.55601 0.00045561 NaN NaN NaN NaN 122.12 0.41183 122.12 121.99 122.4 0 0 0 0 0.023969 1 72905 42.629 32.397 1 NaN NaN 0 1694800 0 1694800 33740 719 12787 13142 52570 52570 TANLAEANASEEDK 14 1 0 Unmodified _TANLAEANASEEDK_ 0 0 0 I3L3Y2;H3BUN0;Q7Z6E9 I3L3Y2 I3L3Y2 RBBP6 E3 ubiquitin-protein ligase RBBP6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.8447 2 731.836442 1461.65833 NaN NaN NaN 1.1934 0.00087339 NaN NaN NaN NaN 25.295 0.26373 25.295 25.153 25.417 -1.9073E-06 0 0 0 0.0013412 1 10944 71.888 54.667 1 NaN NaN 0 4825700 0 4825700 33741 1306 12788 13143 52571 52571 TANLAEANASEEDK 14 1 0 Unmodified _TANLAEANASEEDK_ 0 0 0 I3L3Y2;H3BUN0;Q7Z6E9 I3L3Y2 I3L3Y2 RBBP6 E3 ubiquitin-protein ligase RBBP6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.8369 2 731.836442 1461.65833 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.331 1 25.331 24.831 25.831 0 0 0 0 0.0027889 1 10962 76.326 60.436 1 33742 1306 12788 13143 52572 52572 TANSPGSGARPDPVR 15 0 2 Unmodified _TANSPGSGARPDPVR_ 0 0 1 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.5871 3 494.586694 1480.73825 86365.26 -0.22751 -0.00011252 -0.29421 -0.00014551 -0.52172 -0.00025804 494.586855879367 501.258392448043 20.207 0.47973 20.207 19.924 20.404 0 62 19 9 0 0 0 0.010557 2 5683 30.133 30.133 1 1.1378 0.99573 0 4488400 2147500 2340900 33743 1708 12789 13144 52573;52574 52573 TANSPGSGARPDPVR 15 0 2 Unmodified _TANSPGSGARPDPVR_ 0 0 1 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.5866 3 494.586694 1480.73825 87567.4 -0.32066 -0.00015859 0.7357 0.00036387 0.41504 0.00020527 494.586971424081 501.259349117369 20.165 0.33687 20.165 20.005 20.342 0 48 10 8 0 0 0 0.013912 1 5183 27.335 27.335 1 0.88447 0.79515 0 2531700 1325600 1206000 33744 1708 12789 13144 52575 52575 TAPLLLSYYLIK 12 1 0 Unmodified _TAPLLLSYYLIK_ 0 0 0 G3V198;Q12769;E9PR16 G3V198 G3V198 NUP160 Nuclear pore complex protein Nup160 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.9186 2 697.918321 1393.82209 73909.05 0.94006 0.00065609 -0.27871 -0.00019452 0.66135 0.00046157 697.917996242603 701.925333228459 125.82 0.73724 125.82 125.55 126.29 7.6294E-06 214 52 6 0 0 0 0.016404 2 81737 42.21 40.411 1 1.0912 1.1079 0 6172500 2758100 3414400 33745 1271 12790 13145 52576;52577 52576 TAPLLLSYYLIK 12 1 0 Unmodified _TAPLLLSYYLIK_ 0 0 0 G3V198;Q12769;E9PR16 G3V198 G3V198 NUP160 Nuclear pore complex protein Nup160 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.9263 2 697.918321 1393.82209 74271.16 0.91134 0.00063604 -0.2526 -0.0001763 0.65873 0.00045974 697.918157704365 701.925236834227 125.31 0.68387 125.31 125.05 125.74 -7.6294E-06 210 46 6 0 0 0 0.018707 1 83387 40.589 40.589 1 1.1079 1.1208 0 8981700 4464800 4516900 33746 1271 12790 13145 52578 52578 TAPVASTPSSTPIPALSPPTK 21 1 0 Unmodified _TAPVASTPSSTPIPALSPPTK_ 0 0 0 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1010.5507 2 1010.55169 2019.08882 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.92 1 93.92 93.42 94.42 0 0 0 0 0.024269 1 58336 37.654 23.975 1 33747 1874 12791 13146 52579 52579 TAQAVFPAIAQEICQEEVSRPAGK 24 1 1 Unmodified _TAQAVFPAIAQEICQEEVSRPAGK_ 0 0 1 B2R935;A0A024R1S2;Q99741 B2R935 B2R935 CDC6 Cell division control protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 873.4529 3 867.442755 2599.30644 66377.02 0.38429 0.00033335 0.33949 0.00029449 0.72378 0.00062784 867.443566652251 873.784772068933 118.23 0.43961 118.23 118.04 118.48 0 83 19 8 0 0 0 0.028059 2 68861 18.699 15.734 1 1.1149 0.93952 0 4010900 1663900 2347000 33748 85 12792 13147 52580;52581 52581 TAQCFLR 7 0 1 Unmodified _TAQCFLR_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.226 2 448.226362 894.438172 NaN NaN NaN 0.22692 0.00010171 NaN NaN NaN NaN 36.392 0.51703 36.392 36.082 36.599 -3.8147E-06 0 0 0 0.032754 1 18630 77.748 25.065 1 NaN NaN 0 7302200 7302200 0 33749 1854 12793 13148 52582 52582 TAQETSTMTMNVSQVDDVVSSK 22 1 0 2 Oxidation (M) _TAQETSTM(ox)TM(ox)NVSQVDDVVSSK_ TAQETSTM(1)TM(1)NVSQVDDVVSSK TAQETSTM(75.57)TM(75.57)NVSQVDDVVSSK 0 2 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1199.5436 2 1195.53852 2389.06248 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.602 1 57.602 57.102 58.102 0 0 0 0 2.7125E-08 1 32571 75.574 63.782 1 33750 1945 12794 13149 52583 52583 1793;1794 TAQETSTMTMNVSQVDDVVSSK 22 1 0 2 Oxidation (M) _TAQETSTM(ox)TM(ox)NVSQVDDVVSSK_ TAQETSTM(1)TM(1)NVSQVDDVVSSK TAQETSTM(80.61)TM(80.61)NVSQVDDVVSSK 0 2 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1199.5479 2 1195.53852 2389.06248 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.807 1 56.807 56.307 57.307 -3.8147E-06 0 0 0 7.9454E-09 1 32780 80.609 73.408 1 33751 1945 12794 13149 52584 52584 1793;1794 TAQEVETYR 9 0 1 Unmodified _TAQEVETYR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3KRX8;J3QR02;C1IK54 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.7715 2 548.767103 1095.51965 81850 0.22412 0.00012299 0.17004 9.3311E-05 0.39416 0.0002163 548.766993882204 553.771265424275 23.197 0.60777 23.197 23.014 23.622 1.9073E-06 108 29 6 0 0 0 2.2531E-05 2 9122 116.05 98.635 1 1.0636 1.0874 0 31460000 14248000 17212000 33752 1009 12795 13150 52585;52586 52586 TAQEVETYR 9 0 1 Unmodified _TAQEVETYR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3KRX8;J3QR02;C1IK54 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.7672 2 548.767103 1095.51965 84251.8 0.15459 8.4831E-05 0.091403 5.0159E-05 0.24599 0.00013499 548.767155032214 553.770880361169 23.026 0.43232 23.026 22.77 23.202 -1.9073E-06 63 18 6 0 0 0 0.0014031 2 8958 85.862 71.859 1 1.0828 1.0771 0 16327000 8264400 8062100 33753 1009 12795 13150 52587;52588 52588 TAQEVETYR 9 0 1 Unmodified _TAQEVETYR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3KRX8;J3QR02;C1IK54 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.7671 2 548.767103 1095.51965 NaN NaN NaN -0.15796 -8.6681E-05 NaN NaN NaN NaN 25.836 0.50407 25.836 25.635 26.139 0 0 0 0 0.021958 1 9522 64.04 31.2 1 NaN NaN 0 1238900 1238900 0 33754 1009 12795 13150 52589 52589 TAQEVETYR 9 0 1 Unmodified _TAQEVETYR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3KRX8;J3QR02;C1IK54 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.772 2 548.767103 1095.51965 NaN NaN NaN 3.0461 0.0016716 NaN NaN NaN NaN 25.822 0.36422 25.822 25.604 25.968 0 0 0 0 0.019405 1 9566 59.35 30.201 1 NaN NaN 0 1077200 0 1077200 33755 1009 12795 13150 52590 52590 TAQEVETYRR 10 0 2 Unmodified _TAQEVETYRR_ 0 0 1 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3KRX8;J3QR02;C1IK54 B4DN41 B4DN41 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 424.8862 3 418.214198 1251.62076 92108.11 -0.13794 -5.7687E-05 0.016123 6.7427E-06 -0.12181 -5.0945E-05 418.214018720775 424.886287199689 18.233 0.36929 18.233 18.021 18.39 0 64 20 5 0 0 0 0.0079501 1 5010 44.309 39.211 1 1.4452 1.4514 0 9465800 4055100 5410600 33756 1009 12796 13151 52591 52591 TAQGLPGTSNSNSSR 15 0 1 Unmodified _TAQGLPGTSNSNSSR_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;B3KMW2 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.8558 2 738.8555 1475.69645 71754.08 0.77163 0.00057012 0.51439 0.00038006 1.286 0.00095018 739.357391981498 743.85993715415 22.645 0.35836 22.645 22.485 22.843 1.9073E-06 60 15 5 0 0 0 1.3111E-05 2 8596 90.653 90.653 1 0.99235 1.0008 0 10462000 6004900 4456800 33757 260 12797 13152 52592;52593 52592 TAQNFLSIFLK 11 1 0 Unmodified _TAQNFLSIFLK_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.8657 2 641.363713 1280.71287 78078.05 0.90541 0.0005807 -0.19826 -0.00012716 0.70715 0.00045354 641.363534723721 645.370686663236 127.6 0.56136 127.6 127.34 127.9 -7.6294E-06 145 36 5 0 0 0 4.1815E-05 2 83030 99.653 99.653 1 0.58254 0.58452 0 5097500 2737200 2360400 33758 1843 12798 13153 52594;52595 52594 TAQNFLSIFLK 11 1 0 Unmodified _TAQNFLSIFLK_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3644 2 641.363713 1280.71287 78971.24 0.88137 0.00056528 -0.0082644 -5.3005E-06 0.87311 0.00055998 641.363693477265 645.370749944711 127.07 0.6647 127.07 126.84 127.5 7.6294E-06 173 41 6 0 0 0 7.8316E-06 3 84709 109.66 109.66 1 0.65217 0.65717 0 7404300 4544900 2859400 33759 1843 12798 13153 52596;52597;52598 52596 TASALFAGFR 10 0 1 Unmodified _TASALFAGFR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.7836 2 520.779816 1039.54508 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.447 1 87.447 86.947 87.947 -7.6294E-06 0 0 0 6.5427E-06 1 52770 101.64 77.489 1 33760 486 12799 13154 52599 52599 TASALFAGFR 10 0 1 Unmodified _TASALFAGFR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.7839 2 520.779816 1039.54508 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.214 1 88.214 87.714 88.714 0 0 0 0 0.00024632 1 53183 78.113 49.939 1 33761 486 12799 13154 52600 52600 TASALFAGFR 10 0 1 Unmodified _TASALFAGFR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.7844 2 520.779816 1039.54508 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.007 1 89.007 88.507 89.507 0 0 0 0 2.9416E-08 1 53709 112.84 88.687 1 33762 486 12799 13154 52601 52601 TASALFAGFR 10 0 1 Unmodified _TASALFAGFR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.7833 2 520.779816 1039.54508 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.066 1 89.066 88.566 89.566 0 0 0 0 6.9909E-05 1 53757 82.75 59.322 1 33763 486 12799 13154 52602 52602 TASALFAGFR 10 0 1 Unmodified _TASALFAGFR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.2858 2 520.779816 1039.54508 85282.06 0.21685 0.00011293 0.30568 0.00015919 0.52253 0.00027212 520.780710019012 525.783675497168 86.359 1.1462 86.359 86.11 87.256 0 278 100 4 0 0 0 9.0954E-05 2 53140 97.635 86.925 1 0.82199 0.89995 0 32656000 18589000 14067000 33764 486 12799 13154 52603;52604 52604 TASALFAGFR 10 0 1 Unmodified _TASALFAGFR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.7839 2 520.779816 1039.54508 87574.33 0.11602 6.0421E-05 0.36636 0.00019079 0.48238 0.00025122 520.780202262604 525.783993074107 100.69 1.3724 100.69 100.37 101.74 0 350 95 6 0 0 0 0.0020593 1 56856 70.816 65.831 1 1.0789 0.9286 0 7471900 3688300 3783500 33765 486 12799 13154 52605 52605 TASALFAGFR 10 0 1 Unmodified _TASALFAGFR_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.7847 2 520.779816 1039.54508 86607.13 0.21889 0.00011399 0.3341 0.00017399 0.55298 0.00028798 520.780136944877 525.783964830129 100.54 1.1379 100.54 100.25 101.38 7.6294E-06 261 79 5 0 0 0 0.033363 1 55880 41.448 38.85 1 1.1562 0.96324 0 6946000 3316100 3629800 33766 486 12799 13154 52606 52606 TASVLSKDDVAPESGDTTVK 20 2 0 Unmodified _TASVLSKDDVAPESGDTTVK_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.3428 3 674.007541 2019.00079 71793.67 0.64367 0.00043384 0.28248 0.00019039 0.92615 0.00062424 674.341898697962 679.350301420799 57.719 0.8265 57.719 57.386 58.213 0 500 60 11 0 0 0 2.8134E-06 1 29170 61.181 61.181 1 0.74616 0.63536 0 25818000 14552000 11267000 33767 1415 12800 13155 52607 52607 TASVLSKDDVAPESGDTTVK 20 2 0 Unmodified _TASVLSKDDVAPESGDTTVK_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.3505 3 674.007541 2019.00079 72617.73 0.53882 0.00036317 -0.040689 -2.7425E-05 0.49813 0.00033575 674.34182456743 679.350129857201 58.342 0.95324 58.342 57.929 58.882 0 518 72 10 0 0 0 6.3335E-05 2 28977 35.678 26.515 1 0.7405 0.62801 0 20615000 12701000 7913500 33768 1415 12800 13155 52608;52609 52609 TATESFASDPILYR 14 0 1 Unmodified _TATESFASDPILYR_ 0 0 0 V9HWB8;P14618;A0A024R5Z9;H3BTN5;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.3979 2 785.89102 1569.76749 NaN NaN NaN 0.29172 0.00022926 NaN NaN NaN NaN 89.12 0.089378 89.12 89.063 89.153 0 0 0 0 0.0085228 1 53798 53.08 44.86 1 NaN NaN 0 7272000 0 7272000 33769 1481 12801 13156 52610 52610 TATESFASDPILYRPVAVALDTK 23 1 1 Unmodified _TATESFASDPILYRPVAVALDTK_ 0 0 1 V9HWB8;P14618;A0A024R5Z9;H3BTN5;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.443 3 822.435595 2464.28496 NaN NaN NaN -0.19831 -0.0001631 NaN NaN NaN NaN 113.47 0.77531 113.47 113.05 113.83 0 0 0 0 0.00010656 1 71692 45.784 35.241 1 NaN NaN 0 79118000 0 79118000 33770 1481 12802 13157 52611 52611 TATESFASDPILYRPVAVALDTK 23 1 1 Unmodified _TATESFASDPILYRPVAVALDTK_ 0 0 1 V9HWB8;P14618;A0A024R5Z9;H3BTN5;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.7775 3 822.435595 2464.28496 NaN NaN NaN -0.22869 -0.00018808 NaN NaN NaN NaN 112.77 0.64995 112.77 112.49 113.14 7.6294E-06 0 0 0 3.451E-39 1 73086 135.21 117.21 1 NaN NaN 0 96905000 0 96905000 33771 1481 12802 13157 52612 52612 TATESFASDPILYRPVAVALDTK 23 1 1 Unmodified _TATESFASDPILYRPVAVALDTK_ 0 0 1 V9HWB8;P14618;A0A024R5Z9;H3BTN5;A0A024R609;H3BQ34;H3BT25;H3BUW1;H3BTJ2 V9HWB8 V9HWB8 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 828.7783 3 822.435595 2464.28496 65517.33 0.86719 0.0007132 -0.079105 -6.5059E-05 0.78808 0.00064815 822.770077949407 828.442570266288 124.37 0.59428 124.37 124.1 124.7 0 160 25 11 0 0 0 8.3257E-08 2 73532 50.029 50.029 1 2.4726 2.0994 0 23255000 8082600 15172000 33772 1481 12802 13157 52613;52614 52613 TATFAISILQQIELDLK 17 1 0 Unmodified _TATFAISILQQIELDLK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102;J3KS93 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 956.5482 2 952.540591 1903.06663 63386.81 0.12281 0.00011699 0.5366 0.00051114 0.65942 0.00062812 953.042260305402 956.548187741644 143.24 0.4791 143.24 143.06 143.54 0 166 51 6 0 0 0 1.0608E-06 1 92300 90.412 90.412 1 1.826 2.0161 0 2475900 956120 1519800 33773 770 12803 13158 52615 52615 TATFAISILQQIELDLK 17 1 0 Unmodified _TATFAISILQQIELDLK_ 0 0 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3QKZ9;B4E047;J3KS25;B4E102;J3KS93 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 953.0412 2 952.540591 1903.06663 64141.23 0.31863 0.00030351 0.35967 0.0003426 0.6783 0.0006461 952.54044540123 956.548140129693 142.8 0.70078 142.8 142.46 143.16 0 290 74 7 0 0 0 0.037656 1 92155 35.006 35.006 1 1.9412 2.1303 0 3256700 1095000 2161700 33774 770 12803 13158 52616 52616 TATGPSTGGGTVISR 15 0 1 Unmodified _TATGPSTGGGTVISR_ 0 0 0 Q8N1G0;H0Y5I5;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3552 2 681.354605 1360.69466 74888.41 0.58747 0.00040027 0.29569 0.00020147 0.88315 0.00060174 681.354878549175 686.358737205165 30.895 0.4761 30.895 30.631 31.107 0 149 43 5 0 0 0 0.00022128 2 15204 84.169 73.018 1 0.72783 0.75019 0 14065000 8038500 6027000 33775 1905 12804 13159 52617;52618 52618 TATGPSTGGGTVISR 15 0 1 Unmodified _TATGPSTGGGTVISR_ 0 0 0 Q8N1G0;H0Y5I5;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.3553 2 681.354605 1360.69466 74403.33 0.333 0.00022689 0.44401 0.00030253 0.777 0.00052941 681.35487808247 686.358925141909 30.389 0.47914 30.389 30.154 30.633 -1.9073E-06 136 39 6 0 0 0 0.00022386 2 14791 69.864 58.712 1 0.62925 0.6447 0 20994000 11121000 9873300 33776 1905 12804 13159 52619;52620 52620 TATGPSTGGGTVISR 15 0 1 Unmodified _TATGPSTGGGTVISR_ 0 0 0 Q8N1G0;H0Y5I5;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.359 2 681.354605 1360.69466 74419.14 0.43835 0.00029867 0.43255 0.00029472 0.8709 0.00059339 681.354663415825 686.358860951168 35.407 0.49847 35.407 35.206 35.705 0 181 43 6 0 0 0 0.0043705 2 15706 41.218 41.218 1 1.7417 1.4577 0 3919900 1432900 2487000 33777 1905 12804 13159 52621;52622 52621 TATGPSTGGGTVISR 15 0 1 Unmodified _TATGPSTGGGTVISR_ 0 0 0 Q8N1G0;H0Y5I5;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 681.3562 2 681.354605 1360.69466 75359.53 0.65862 0.00044875 0.43817 0.00029855 1.0968 0.0007473 681.354596242658 686.358683877619 35.606 0.57873 35.606 35.316 35.895 0 196 48 6 0 0 0 0.019018 2 15355 29.303 29.303 1 1.7486 1.5029 0 2795000 1133700 1661300 33778 1905 12804 13159 52623;52624 52624 TATITEPR 8 0 1 Unmodified _TATITEPR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 449.7471 2 444.742899 887.471246 91929.62 0.044323 1.9712E-05 -0.16558 -7.3639E-05 -0.12125 -5.3927E-05 444.742518477077 449.747034261171 24.408 0.3832 24.408 24.237 24.621 0 53 14 6 0 0 0 0.025194 1 10082 55.37 19.185 1 1.0244 1.0651 0 20958000 10510000 10448000 33779 794 12805 13160 52625 52625 TATSLAEGLSLVVSPDSIHSVAPENEGR 28 0 1 Unmodified _TATSLAEGLSLVVSPDSIHSVAPENEGR_ 0 0 0 A0A024R2F9;Q9BTV4;A0A0S2Z5N2 A0A024R2F9 A0A024R2F9 TMEM43 Transmembrane protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.4827 3 946.148953 2835.42503 62842.98 0.79734 0.0007544 -0.15575 -0.00014736 0.64159 0.00060704 946.483122677017 949.819655878396 114.87 0.61458 114.87 114.64 115.26 0 166 39 7 0 0 0 1.3118E-16 2 72918 72.474 72.474 1 0.45765 0.46519 0 14971000 9652900 5318300 33780 110 12806 13161 52626;52627 52626 TATSLAEGLSLVVSPDSIHSVAPENEGR 28 0 1 Unmodified _TATSLAEGLSLVVSPDSIHSVAPENEGR_ 0 0 0 A0A024R2F9;Q9BTV4;A0A0S2Z5N2 A0A024R2F9 A0A024R2F9 TMEM43 Transmembrane protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.8201 3 946.148953 2835.42503 63328.59 0.79203 0.00074938 -0.22907 -0.00021674 0.56296 0.00053264 946.482536506763 949.819853391648 114.32 0.47641 114.32 114.1 114.57 -7.6294E-06 196 32 9 0 0 0 9.364E-07 3 74350 40.819 40.819 1 0.40468 0.40602 0 17428000 11532000 5896600 33781 110 12806 13161 52628;52629;52630 52629 TATSLAEGLSLVVSPDSIHSVAPENEGR 28 0 1 Unmodified _TATSLAEGLSLVVSPDSIHSVAPENEGR_ 0 0 0 A0A024R2F9;Q9BTV4;A0A0S2Z5N2 A0A024R2F9 A0A024R2F9 TMEM43 Transmembrane protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 946.4836 3 946.148953 2835.42503 63016.28 0.90533 0.00085658 -0.14265 -0.00013497 0.76268 0.00072161 946.483096077412 949.81921514017 126.28 0.66425 126.28 126.06 126.72 0 117 23 10 0 0 0 9.7554E-07 2 75961 40.454 40.454 1 0.64248 0.55244 0 6740100 4330600 2409500 33782 110 12806 13161 52631;52632 52631 TATSLAEGLSLVVSPDSIHSVAPENEGR 28 0 1 Unmodified _TATSLAEGLSLVVSPDSIHSVAPENEGR_ 0 0 0 A0A024R2F9;Q9BTV4;A0A0S2Z5N2 A0A024R2F9 A0A024R2F9 TMEM43 Transmembrane protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 946.8163 3 946.148953 2835.42503 63739.95 0.62975 0.00059584 0.1376 0.00013019 0.76735 0.00072603 946.483019861558 949.819790326029 126.18 0.55753 126.18 125.95 126.51 0 143 24 9 0 0 0 0.0086072 1 74914 21.671 21.671 1 0.4906 0.40703 0 5168000 3257000 1911000 33783 110 12806 13161 52633 52633 TATTQETDGFQVK 13 1 0 Unmodified _TATTQETDGFQVK_ 0 0 0 A0A024R137;A0A024R102;Q96GM5;F8VUB0;A8K9I5;F8VRQ4;F8VZ70 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.3561 2 713.346446 1424.67834 73102.96 1.157 0.00082532 -0.19186 -0.00013686 0.96512 0.00068846 713.346200550671 717.352740167881 41.265 0.36883 41.265 41.028 41.397 0 119 29 6 0 0 0 2.3839E-13 1 21639 127.76 127.76 1 0.67215 0.68508 0 17917000 12154000 5762900 33784 65 12807 13162 52634 52634 TATTQETDGFQVK 13 1 0 Unmodified _TATTQETDGFQVK_ 0 0 0 A0A024R137;A0A024R102;Q96GM5;F8VUB0;A8K9I5;F8VRQ4;F8VZ70 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.8571 2 713.346446 1424.67834 72711.83 0.8075 0.00057603 -0.5417 -0.00038642 0.26581 0.00018961 713.34616706339 717.353286656138 40.12 0.57051 40.12 39.902 40.472 3.8147E-06 156 48 5 0 0 0 0.00016144 2 21433 87.298 87.298 1 0.76354 0.7647 0 15700000 9402900 6297100 33785 65 12807 13162 52635;52636 52636 TATTQETDGFQVK 13 1 0 Unmodified _TATTQETDGFQVK_ 0 0 0 A0A024R137;A0A024R102;Q96GM5;F8VUB0;A8K9I5;F8VRQ4;F8VZ70 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.3535 2 713.346446 1424.67834 75835.41 0.31472 0.0002245 0.030026 2.1419E-05 0.34474 0.00024592 713.346503868626 717.353519896404 48.05 0.5756 48.05 47.661 48.237 -3.8147E-06 89 47 5 0 0 0 0.0054583 2 22778 47.302 43.003 1 2.122 1.7564 0 1616300 548150 1068200 33786 65 12807 13162 52637;52638 52637 TATVHEVIR 9 0 1 Unmodified _TATVHEVIR_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 345.8654 3 342.529458 1024.56654 104855.4 -0.2949 -0.00010101 0.16336 5.5956E-05 -0.13153 -4.5054E-05 342.529501876091 345.865579188415 24.405 0.36092 24.405 24.26 24.621 0 37 13 6 0 0 0 0.011877 1 10171 36.424 28.204 1 1.1813 1.18 0 8820000 3495500 5324500 33787 1103 12808 13163 52639 52639 TATVHEVIR 9 0 1 Unmodified _TATVHEVIR_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 345.8653 3 342.529458 1024.56654 102234.2 -0.47104 -0.00016135 -0.16764 -5.7423E-05 -0.63868 -0.00021877 342.52943599307 345.865572147612 23.871 0.30436 23.871 23.748 24.053 0 39 11 5 0 0 0 0.0061724 1 9713 44.203 36.557 1 1.1069 1.1005 0 8431600 4294200 4137300 33788 1103 12808 13163 52640 52640 TAVAPIER 8 0 1 Unmodified _TAVAPIER_ 0 0 0 Q6I9V5;Q59EI9;P12236;A0A0S2Z359;V9GYG0;A8K787;A0A0S2Z3H3;P12235;Q9H0C2 Q6I9V5 Q6I9V5 SLC25A6;SLC25A4;SLC25A31 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 428.748 2 428.747985 855.481417 NaN NaN NaN 0.55691 0.00023877 NaN NaN NaN NaN 29.586 0.32349 29.586 29.465 29.789 0 0 0 0 0.049746 1 14339 50.04 14.613 1 NaN NaN 0 13745000 13745000 0 33789 1474 12809 13164 52641 52641 TAVCDIPPR 9 0 1 Unmodified _TAVCDIPPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.7638 2 514.763309 1027.51206 NaN NaN NaN 0.43551 0.00022419 NaN NaN NaN NaN 39.674 1.2663 39.674 39.518 40.785 0 0 0 0 3.1829E-05 3 20739 106.93 71.432 1 NaN NaN 0 58941000 58941000 0 33790 1452;1660;1723;1441;1778 12810 13165 52642;52643;52644 52642 TAVCDIPPR 9 0 1 Unmodified _TAVCDIPPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.7673 2 514.763309 1027.51206 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.175 1 40.175 39.675 40.675 0 0 0 0 0.013328 1 20969 60.436 26.184 1 33791 1452;1660;1723;1441;1778 12810 13165 52645 52645 TAVCDIPPR 9 0 1 Unmodified _TAVCDIPPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.7625 2 514.763309 1027.51206 82630.07 0.227 0.00011685 0.10677 5.4963E-05 0.33377 0.00017181 514.763297532631 519.767370978395 38.042 1.1128 38.042 37.09 38.203 0 234 87 6 0 0 0 0.00028235 2 19969 103.56 77.826 1 1.553 1.7782 0 166500000 59285000 107210000 33792 1452;1660;1723;1441;1778 12810 13165 52646;52647 52647 TAVCDIPPR 9 0 1 Unmodified _TAVCDIPPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7677 2 514.763309 1027.51206 82630.09 0.33869 0.00017435 0.36166 0.00018617 0.70035 0.00036052 514.763508356083 519.767529649027 38.63 1.7913 38.63 38.396 40.187 0 415 154 6 0 0 0 0.0010522 4 20366 90.657 73.881 1 1.4886 1.6999 0 148230000 68802000 79427000 33793 1452;1660;1723;1441;1778 12810 13165 52648;52649;52650;52651 52648 TAVCDIPPR 9 0 1 Unmodified _TAVCDIPPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7677 2 514.763309 1027.51206 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.102 1 37.102 36.602 37.602 0 0 0 0 0.0030519 1 19206 76.827 35.798 1 33794 1452;1660;1723;1441;1778 12810 13165 52652 52652 TAVCDIPPR 9 0 1 Unmodified _TAVCDIPPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.7626 2 514.763309 1027.51206 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.197 1 37.197 36.697 37.697 0 0 0 0 0.0033771 1 19276 71.379 47.225 1 33795 1452;1660;1723;1441;1778 12810 13165 52653 52653 TAVCDIPPR 9 0 1 Unmodified _TAVCDIPPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 519.7677 2 514.763309 1027.51206 81548.41 0.40119 0.00020652 -0.47163 -0.00024278 -0.070443 -3.6262E-05 514.762930077932 519.767343617968 44.555 3.7317 44.555 42.867 46.599 3.8147E-06 733 265 7 0 0 0 0.0020277 4 20811 77.732 63.575 1 1.1224 0.96583 0 7518400 4045400 3473000 33796 1452;1660;1723;1441;1778 12810 13165 52654;52655;52656;52657 52654 TAVCDIPPR 9 0 1 Unmodified _TAVCDIPPR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q96B85;B4DXZ5;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;Q13885;Q3ZCM7;P04350 Q5JP53 TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB2B;DKFZp566F223;TUBB8;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.7677 2 514.763309 1027.51206 81884.2 0.45485 0.00023414 -0.58613 -0.00030172 -0.13129 -6.7581E-05 514.762903730809 519.767288394023 44.759 3.8708 44.759 42.903 46.774 -3.8147E-06 661 255 5 0 0 0 0.0070864 6 20504 62.546 58.981 1 1.1346 0.94279 0 5955300 2949200 3006100 33797 1452;1660;1723;1441;1778 12810 13165 52658;52659;52660;52661;52662;52663 52660 TAVDGPDLEMLTGQER 16 0 1 Oxidation (M) _TAVDGPDLEM(ox)LTGQER_ TAVDGPDLEM(1)LTGQER TAVDGPDLEM(71.56)LTGQER 0 1 0 B2R8G6;A0A024R7P2;B7Z6M0;Q14318;M0R2K9 B2R8G6 B2R8G6 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8;Peptidyl-prolyl cis-trans isomerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.4127 2 874.411991 1746.80943 65025.21 0.83323 0.00072858 0.18674 0.00016329 1.02 0.00089188 874.411465299267 879.416311010244 84.41 0.46654 84.41 84.179 84.646 -7.6294E-06 149 36 6 0 0 0 7.5091E-05 3 50498 71.558 71.558 1 1.179 1.226 0 20978000 12898000 8080800 33798 232 12811 13166 52664;52665;52666 52666 172 TAVDGPDLEMLTGQER 16 0 1 Oxidation (M) _TAVDGPDLEM(ox)LTGQER_ TAVDGPDLEM(1)LTGQER TAVDGPDLEM(107.65)LTGQER 0 1 0 B2R8G6;A0A024R7P2;B7Z6M0;Q14318;M0R2K9 B2R8G6 B2R8G6 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8;Peptidyl-prolyl cis-trans isomerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 879.9186 2 874.411991 1746.80943 64701.75 0.79666 0.00069661 0.47051 0.00041142 1.2672 0.001108 874.91414943349 879.416737200114 83.563 0.52019 83.563 83.325 83.846 0 167 39 6 0 0 0 4.2961E-09 3 51195 107.65 97.036 1 1.122 1.1257 0 17414000 8383500 9030800 33799 232 12811 13166 52667;52668;52669 52668 172 TAVDSGIPLLTNFQVTK 17 1 0 Unmodified _TAVDSGIPLLTNFQVTK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 902.9986 2 902.496184 1802.97781 64974.12 0.84283 0.00076065 -0.19412 -0.0001752 0.64871 0.00058546 902.495806194684 906.502653273882 120.53 0.39848 120.53 120.34 120.74 0 114 28 6 0 0 0 0.00060482 1 77711 46.706 46.706 1 1.7125 1.7696 0 11047000 3379800 7667700 33800 148 12812 13167 52670 52670 TAVDSGIPLLTNFQVTK 17 1 0 Unmodified _TAVDSGIPLLTNFQVTK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.4965 2 902.496184 1802.97781 64080.66 1.0219 0.00092227 -0.19107 -0.00017244 0.83084 0.00074983 902.997781232474 907.004998172589 120.1 0.43542 120.1 119.83 120.26 0 110 31 5 0 0 0 7.3245E-05 2 79240 67.385 67.385 1 1.7968 1.7946 0 14164000 4662200 9502100 33801 148 12812 13167 52671;52672 52672 TAVEFLSK 8 1 0 Unmodified _TAVEFLSK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3;Q6W6M7 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 447.7499 2 447.750193 893.485833 93195.82 0.12616 5.6489E-05 0.74329 0.00033281 0.86945 0.0003893 447.750282718581 451.757403486817 57.735 0.65006 57.735 57.443 58.093 0 157 53 5 0 0 0 0.017453 1 33560 60.436 39.136 1 1.1081 1.1372 0 25412000 12135000 13277000 33802 122 12813 13168 52673 52673 TAVEMLQNQLK 11 1 0 Oxidation (M) _TAVEM(ox)LQNQLK_ TAVEM(1)LQNQLK TAVEM(55.57)LQNQLK 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.8401 2 645.839745 1289.66494 NaN NaN NaN 0.27497 0.00017759 NaN NaN NaN NaN 58.93 0.29208 58.93 58.804 59.096 0 0 0 0 0.0039911 1 33492 55.567 37.703 1 NaN NaN 0 3536100 3536100 0 33803 1581 12814 13169 52674 52674 1365 TAVEMLQNQLK 11 1 0 Oxidation (M) _TAVEM(ox)LQNQLK_ TAVEM(1)LQNQLK TAVEM(58.43)LQNQLK 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.847 2 645.839745 1289.66494 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.41 1 57.41 56.91 57.91 0 0 0 0 0.0048582 1 32431 58.433 38.647 1 33804 1581 12814 13169 52675 52675 1365 TAVETAVLLLR 11 0 1 Unmodified _TAVETAVLLLR_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.368 2 593.363713 1184.71287 80849.04 0.79521 0.00047185 0.18441 0.00010942 0.97963 0.00058127 593.364069410894 598.367899098518 107.86 0.61947 107.86 107.55 108.17 -7.6294E-06 148 45 4 0 0 0 0.0020494 1 67085 62.823 62.823 1 1.6638 1.6511 0 8242400 3111800 5130600 33805 951 12815 13170 52676 52676 TAVETAVLLLR 11 0 1 Unmodified _TAVETAVLLLR_ 0 0 0 B4DUR8;B3KX11;Q2TU64;Q59H77;P49368 B4DUR8 B4DUR8 CCT3 T-complex protein 1 subunit gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.8699 2 593.363713 1184.71287 80779.05 0.81492 0.00048354 0.046015 2.7303E-05 0.86093 0.00051084 593.363824115666 598.367712775359 107.1 0.56525 107.1 106.8 107.37 0 109 38 4 0 0 0 2.1845E-05 2 68202 104.2 104.2 1 1.8228 1.8351 0 10800000 3556500 7243600 33806 951 12815 13170 52677;52678 52677 TAVFQEFSHSR 11 0 1 Unmodified _TAVFQEFSHSR_ 0 0 0 B4DYZ1;F8WAJ0;Q9H8H2 B4DYZ1;F8WAJ0 B4DYZ1 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.2418 3 436.882559 1307.62585 93305.73 -0.46535 -0.0002033 1.1783 0.00051479 0.71298 0.00031149 436.883000739049 440.219452297996 49.681 0.33181 49.681 49.463 49.794 0 42 19 4 0 0 0 0.032306 1 27265 27.137 27.137 1 0.73886 0.753 0 6912200 4544900 2367300 33807 1053;1268 12816 13171 52679 52679 TAVSGIRPENLK 12 1 1 Unmodified _TAVSGIRPENLK_ 0 0 1 Q9GZR2;B4E331;B4DJ95 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8677 2 642.867151 1283.71975 78029.81 1.0767 0.00069216 -0.20306 -0.00013054 0.87362 0.00056162 642.866993638544 651.87823736677 38.741 0.34024 38.741 38.568 38.908 0 91 27 5 0 0 0 0.00097758 2 19929 77.744 62.484 1 0.96075 1.0269 0 13061000 6655900 6405300 33808 2021 12817 13172 52680;52681 52680 TAVSGIRPENLK 12 1 1 Unmodified _TAVSGIRPENLK_ 0 0 1 Q9GZR2;B4E331;B4DJ95 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8795 2 642.867151 1283.71975 76907.4 0.56883 0.00036568 -0.097449 -6.2647E-05 0.47138 0.00030303 642.867214276164 651.878211795393 37.459 0.38681 37.459 37.332 37.718 0 98 32 5 0 0 0 0.00032145 2 19446 98.156 69.07 1 0.84391 0.96802 0 23907000 11338000 12569000 33809 2021 12817 13172 52682;52683 52682 TAVSGIRPENLK 12 1 1 Unmodified _TAVSGIRPENLK_ 0 0 1 Q9GZR2;B4E331;B4DJ95 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 434.9212 3 428.91386 1283.71975 89497.22 -0.16543 -7.0953E-05 -0.089766 -3.8502E-05 -0.25519 -0.00010946 428.913861330165 434.921322281477 44.295 0.55679 44.295 44.043 44.6 0 173 36 7 0 0 0 0.040332 1 20982 29.299 21.433 1 1.2235 1.0083 0 5254800 2476400 2778400 33810 2021 12817 13172 52684 52684 TAVSGIRPENLK 12 1 1 Unmodified _TAVSGIRPENLK_ 0 0 1 Q9GZR2;B4E331;B4DJ95 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.8791 2 642.867151 1283.71975 76607.23 0.66758 0.00042916 -0.22666 -0.00014571 0.44092 0.00028345 642.866951982019 651.878157035687 44.313 0.46776 44.313 44.07 44.538 0 118 29 6 0 0 0 0.0010334 1 21012 77.062 77.062 1 1.4258 1.2316 0 2614000 1177800 1436200 33811 2021 12817 13172 52685 52685 TAVSGIRPENLK 12 1 1 Unmodified _TAVSGIRPENLK_ 0 0 1 Q9GZR2;B4E331;B4DJ95 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.8788 2 642.867151 1283.71975 76320.22 0.68019 0.00043727 -0.30612 -0.00019679 0.37407 0.00024048 642.86699985289 651.878111597644 44.185 0.49177 44.185 44.003 44.495 3.8147E-06 125 30 6 0 0 0 0.024472 1 20407 53.237 38.571 1 1.4183 1.2249 0 2134900 871800 1263100 33812 2021 12817 13172 52686 52686 TAVTGSLSENDPLR 14 0 1 Unmodified _TAVTGSLSENDPLR_ 0 0 0 Q8NEJ9;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.378 2 730.372995 1458.73144 71522.73 0.82875 0.0006053 -0.10936 -7.9875E-05 0.71939 0.00052542 730.372466061937 735.377250261051 67.943 0.80497 67.943 67.681 68.486 0 322 70 8 0 0 0 2.0702E-46 3 39267 177.44 177.44 1 0.77213 0.85714 0 69848000 39083000 30765000 33813 1927 12818 13173 52687;52688;52689 52689 TAVTGSLSENDPLR 14 0 1 Unmodified _TAVTGSLSENDPLR_ 0 0 0 Q8NEJ9;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.3778 2 730.372995 1458.73144 70522.84 0.56145 0.00041007 -0.62923 -0.00045957 -0.067777 -4.9502E-05 730.372753742211 735.377346730218 66.813 0.96381 66.813 66.486 67.449 0 370 80 9 0 0 0 3.7969E-14 3 39422 125.72 125.72 1 0.82033 0.94 0 83473000 47197000 36276000 33814 1927 12818 13173 52690;52691;52692 52691 TAVTGSLSENDPLR 14 0 1 Unmodified _TAVTGSLSENDPLR_ 0 0 0 Q8NEJ9;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.3774 2 730.372995 1458.73144 71674.68 0.55207 0.00040322 -0.2515 -0.00018369 0.30058 0.00021953 730.372657463633 735.377188573508 78.075 1.0571 78.075 77.722 78.78 0 381 69 11 0 0 0 9.7987E-06 2 41729 99.215 86.639 1 0.99884 0.84003 0 27141000 13741000 13400000 33815 1927 12818 13173 52693;52694 52693 TAVTGSLSENDPLR 14 0 1 Unmodified _TAVTGSLSENDPLR_ 0 0 0 Q8NEJ9;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.3735 2 730.372995 1458.73144 71195.34 0.65004 0.00047477 -1.1281 -0.00082394 -0.47807 -0.00034917 730.37252682992 735.377081938513 78.372 1.0061 78.372 78.025 79.031 -7.6294E-06 374 66 11 0 0 0 0.00011216 2 41256 83.182 72.811 1 0.97965 0.84599 0 22784000 12370000 10414000 33816 1927 12818 13173 52695;52696 52696 TAVVVGTITDDVR 13 0 1 Unmodified _TAVVVGTITDDVR_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.3702 2 673.369724 1344.72489 74447.01 0.82406 0.0005549 -0.18926 -0.00012744 0.63481 0.00042746 673.369773096224 678.373672265816 79.703 1.9384 79.703 79.127 81.066 0 999 168 10 0 0 0 3.9173E-39 4 47772 185.96 162.73 1 0.92686 1.103 0 1569400000 804190000 765250000 33817 16 12819 13174 52697;52698;52699;52700 52700 TAVVVGTITDDVR 13 0 1 Unmodified _TAVVVGTITDDVR_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3698 2 673.369724 1344.72489 73613.67 0.6372 0.00042907 -0.23474 -0.00015806 0.40246 0.000271 673.369773470171 678.373613902264 78.621 1.7858 78.621 78.316 80.102 0 972 151 10 0 0 0 7.9098E-14 5 47662 141.1 117.13 1 0.90859 1.0778 0 1947300000 968280000 978970000 33818 16 12819 13174 52701;52702;52703;52704;52705 52702 TAVVVGTITDDVR 13 0 1 Unmodified _TAVVVGTITDDVR_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.3749 2 673.369724 1344.72489 NaN NaN NaN 0.27033 0.00018203 NaN NaN NaN NaN 80.206 0.23783 80.206 80.06 80.298 0 0 0 0 0.00071307 1 48834 80.037 45.316 1 NaN NaN 0 4143300 0 4143300 33819 16 12819 13174 52706 52706 TAVVVGTITDDVR 13 0 1 Unmodified _TAVVVGTITDDVR_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.3701 2 673.369724 1344.72489 73524.38 0.74676 0.00050284 -0.15132 -0.00010189 0.59544 0.00040095 673.369702119382 678.373679394955 91.369 1.9311 91.369 90.883 92.814 0 747 118 10 0 0 0 1.1843E-09 3 50624 124.1 103.8 1 0.88049 0.76211 0 133860000 70650000 63214000 33820 16 12819 13174 52707;52708;52709 52708 TAVVVGTITDDVR 13 0 1 Unmodified _TAVVVGTITDDVR_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.374 2 673.369724 1344.72489 73687.76 0.53235 0.00035847 -0.14136 -9.5191E-05 0.39099 0.00026328 673.369741732552 678.373688166389 91.287 2.4792 91.287 90.689 93.169 0 796 150 10 0 0 0 5.504E-19 4 49701 169.58 128.58 1 0.92353 0.80642 0 143030000 76792000 66234000 33821 16 12819 13174 52710;52711;52712;52713 52711 TCAPLAVLQGHSASITSLQFSPLCSGSK 28 1 0 Unmodified _TCAPLAVLQGHSASITSLQFSPLCSGSK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 976.1638 3 973.156397 2916.44736 61665.01 0.38477 0.00037444 -0.67245 -0.0006544 -0.28768 -0.00027996 973.489653062403 976.16199694969 116.74 0.44448 116.74 116.56 117.01 0 214 29 12 0 0 0 1.4948E-10 2 74575 52.971 52.971 1 0.63258 0.67955 0 39231000 23827000 15404000 33822 1942 12820 13175 52714;52715 52714 TCAPLAVLQGHSASITSLQFSPLCSGSK 28 1 0 Unmodified _TCAPLAVLQGHSASITSLQFSPLCSGSK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 973.4898 3 973.156397 2916.44736 61119.89 0.46753 0.00045498 -0.42531 -0.00041389 0.042218 4.1085E-05 973.48941281427 976.16227989604 116.27 0.45478 116.27 116.03 116.48 0 198 28 9 0 0 0 1.6778E-10 2 75931 51.844 51.844 1 0.69818 0.71528 0 31848000 19402000 12447000 33823 1942 12820 13175 52716;52717 52716 TCAPLAVLQGHSASITSLQFSPLCSGSK 28 1 0 Unmodified _TCAPLAVLQGHSASITSLQFSPLCSGSK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 976.1628 3 973.156397 2916.44736 61174.56 0.50349 0.00048998 0.20233 0.0001969 0.70583 0.00068688 973.490906109529 976.162582521279 128.56 0.61151 128.56 128.26 128.87 0 200 26 11 0 0 0 3.2292E-19 2 77588 77.873 77.873 1 1.4538 1.1933 0 37459000 15279000 22180000 33824 1942 12820 13175 52718;52719 52718 TCAPLAVLQGHSASITSLQFSPLCSGSK 28 1 0 Unmodified _TCAPLAVLQGHSASITSLQFSPLCSGSK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 976.1627 3 973.156397 2916.44736 61091.71 0.35054 0.00034113 -0.26933 -0.0002621 0.081202 7.9023E-05 973.490737294359 976.162234351498 128.38 0.60315 128.38 128.11 128.72 0 220 25 14 0 0 0 5.1849E-16 3 76535 65.581 65.581 1 1.4271 1.1977 0 48520000 20365000 28155000 33825 1942 12820 13175 52720;52721;52722 52721 TCATVTIGGINIAEALVSK 19 1 0 Unmodified _TCATVTIGGINIAEALVSK_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 959.5185 2 959.519333 1917.02411 62901.78 0.42353 0.00040639 0.23055 0.00022122 0.65408 0.0006276 959.519148174426 964.028229241911 124.21 0.23101 124.21 124.1 124.34 0 50 15 5 0 0 0 0.0048887 1 80621 32.068 32.068 1 1.2941 1.296 0 7654700 2856000 4798700 33826 618 12821 13176 52723 52723 TCCYQALLVDEER 13 0 1 Unmodified _TCCYQALLVDEER_ 0 0 0 A0A0C4DGV8;A0A1S5UZH6;Q13214;A0A087WZE0;Q9HBR1 A0A0C4DGV8 A0A0C4DGV8 SEMA3B Semaphorin-3B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.8732 2 828.871447 1655.72834 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.831 1 79.831 79.331 80.331 0 0 0 0 0.017104 1 48554 49.5 42.12 1 33827 518 12822 13177 52724 52724 TCFVDCLIEQTHPEIR 16 0 1 Unmodified _TCFVDCLIEQTHPEIR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.3207 3 673.32052 2016.93973 74648.55 0.80917 0.00054483 -0.19545 -0.0001316 0.61372 0.00041323 673.654676640542 676.990939610739 103.5 0.53303 103.5 103.24 103.77 0 185 42 6 0 0 0 4.7938E-05 2 63835 73.279 73.279 1 0.82375 0.84199 0 18931000 11688000 7243700 33828 794 12823 13178 52725;52726 52725 TCFVDCLIEQTHPEIR 16 0 1 Unmodified _TCFVDCLIEQTHPEIR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.657 3 673.32052 2016.93973 73306.84 0.79385 0.00053451 -0.19132 -0.00012882 0.60253 0.0004057 673.65451011855 676.656654529349 114.85 0.42953 114.85 114.69 115.12 0 111 20 7 0 0 0 5.9159E-05 3 67174 60.246 60.246 1 0.73934 0.63608 0 7005500 3923500 3082000 33829 794 12823 13178 52727;52728;52729 52728 TCFVDCLIEQTHPEIR 16 0 1 Unmodified _TCFVDCLIEQTHPEIR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.6552 3 673.32052 2016.93973 73873.25 0.69914 0.00047075 -0.28718 -0.00019336 0.41197 0.00027739 673.654734278425 676.656698462674 114.7 0.40728 114.7 114.52 114.93 0 104 17 10 0 0 0 0.000119 2 66121 51.193 51.193 1 0.89922 0.74605 0 5412800 2624500 2788200 33830 794 12823 13178 52730;52731 52731 TCLLIVFSK 9 1 0 Unmodified _TCLLIVFSK_ 0 0 0 B4DKN9;Q5JR08;A0A024R324;A0A024R0I3;P61586;P08134;Q5JR07;C9JNR4;E9PQH6;C9JX21;Q5JR05;E9PLA2;C9JRM1;Q5JR06;A0A0B6XK12;E9PN11;U3KQA9;U3KQV3;P62745 B4DKN9 B4DKN9 RHOC;RHOA;hCG_2043376;RHOB Transforming protein RhoA;Rho-related GTP-binding protein RhoC;Rho-related GTP-binding protein RhoB MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.8178 2 540.809728 1079.6049 90826.8 0.66756 0.00036102 -0.29706 -0.00016065 0.3705 0.00020037 540.809095906699 544.816757644361 107.05 0.47114 107.05 106.82 107.29 0 61 32 4 0 0 0 0.017039 1 68292 53.327 42.499 1 1.5469 1.6262 0 4366700 1851600 2515100 33831 48 12824 13179 52732 52732 TCLLIVFSK 9 1 0 Unmodified _TCLLIVFSK_ 0 0 0 B4DKN9;Q5JR08;A0A024R324;A0A024R0I3;P61586;P08134;Q5JR07;C9JNR4;E9PQH6;C9JX21;Q5JR05;E9PLA2;C9JRM1;Q5JR06;A0A0B6XK12;E9PN11;U3KQA9;U3KQV3;P62745 B4DKN9 B4DKN9 RHOC;RHOA;hCG_2043376;RHOB Transforming protein RhoA;Rho-related GTP-binding protein RhoC;Rho-related GTP-binding protein RhoB MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.8103 2 540.809728 1079.6049 90159.2 0.80656 0.00043619 0.089591 4.8451E-05 0.89615 0.00048465 540.809688156443 545.318601764814 118.94 0.43584 118.94 118.73 119.17 0 31 17 4 0 0 0 0.051723 1 69382 37.344 34.337 1 0.76025 0.6381 0 1502300 463720 1038600 33832 48 12824 13179 52733 52733 TCNVLVALEQQSPDIAQGVHLDR 23 0 1 Unmodified _TCNVLVALEQQSPDIAQGVHLDR_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 858.7713 3 855.102621 2562.28603 66099.04 1.04 0.00088934 -0.59371 -0.00050768 0.44633 0.00038166 855.437358990379 858.772687707621 113.68 0.35161 113.68 113.46 113.81 0 69 24 6 0 0 0 3.9242E-08 1 71935 53.998 53.998 1 1.5071 1.5734 0 13270000 4962400 8307200 33833 606 12825 13180 52734 52734 TCNVLVALEQQSPDIAQGVHLDR 23 0 1 Unmodified _TCNVLVALEQQSPDIAQGVHLDR_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.7747 3 855.102621 2562.28603 66425.17 0.82148 0.00070245 -0.16619 -0.00014211 0.65529 0.00056034 855.437789987363 858.772955214582 112.98 0.40598 112.98 112.81 113.22 0 114 26 7 0 0 0 1.6058E-06 2 73295 48.182 48.182 1 1.8143 1.7985 0 12081000 4604900 7475600 33834 606 12825 13180 52735;52736 52735 TCSPASLSQASADLEATLR 19 0 1 Unmodified _TCSPASLSQASADLEATLR_ 0 0 0 Q14258 Q14258 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 994.9852 2 989.480936 1976.94732 NaN NaN NaN -0.47747 -0.00047245 NaN NaN NaN NaN 107.62 0.2119 107.62 107.5 107.71 0 0 0 0 0.0038779 1 66994 43.184 37.577 1 NaN NaN 0 3884400 0 3884400 33835 1731 12826 13181 52737 52737 TCSPASLSQASADLEATLR 19 0 1 Unmodified _TCSPASLSQASADLEATLR_ 0 0 0 Q14258 Q14258 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 994.485 2 989.480936 1976.94732 NaN NaN NaN -0.19947 -0.00019737 NaN NaN NaN NaN 107.03 0.2121 107.03 106.91 107.12 0 0 0 0 0.031257 1 68273 32.275 26.43 1 NaN NaN 0 5681200 0 5681200 33836 1731 12826 13181 52738 52738 TCSQVSSYSLEQESNGEIEHVTK 23 1 0 Unmodified _TCSQVSSYSLEQESNGEIEHVTK_ 0 0 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.7354 3 871.39754 2611.17079 66972.48 0.4439 0.00038681 1.2423 0.0010826 1.6862 0.0014694 871.73255269327 874.403568358349 66.84 0.32022 66.84 66.681 67.001 0 79 27 5 0 0 0 0.00049504 2 39569 32.702 32.702 1 1.1973 1.2421 0 11244000 5951900 5292100 33837 1565 12827 13182 52739;52740 52740 TCSQVSSYSLEQESNGEIEHVTK 23 1 0 Unmodified _TCSQVSSYSLEQESNGEIEHVTK_ 0 0 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 874.4021 3 871.39754 2611.17079 65950.95 0.44597 0.00038862 0.069071 6.0188E-05 0.51504 0.00044881 871.732181202599 874.40318702026 79.118 0.54318 79.118 78.862 79.405 0 172 31 8 0 0 0 0.046005 1 42498 10.684 10.684 1 1.9099 1.5143 0 4317700 1192600 3125000 33838 1565 12827 13182 52741 52741 TCTTVAFTQVNSEDK 15 1 0 Unmodified _TCTTVAFTQVNSEDK_ 0 0 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.8939 2 850.893434 1699.77231 65127.35 0.77858 0.00066249 -0.25515 -0.0002171 0.52343 0.00044538 850.893356235834 854.900497073261 57.499 1.1265 57.499 57.033 58.159 0 588 85 10 0 0 0 2.0197E-07 4 32749 108.56 102.32 1 0.80077 0.91868 0 196070000 105860000 90214000 33839 1648 12828 13183 52742;52743;52744;52745 52744 TCTTVAFTQVNSEDK 15 1 0 Unmodified _TCTTVAFTQVNSEDK_ 0 0 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 851.3965 2 850.893434 1699.77231 64729.61 0.72636 0.00061806 -0.42299 -0.00035992 0.30337 0.00025814 850.893224446779 854.900379763036 56.558 0.97822 56.558 56.206 57.184 0 466 71 10 0 0 0 1.0269E-05 3 32400 92.792 92.792 1 0.78161 0.91938 0 372730000 208230000 164500000 33840 1648 12828 13183 52746;52747;52748 52747 TCTTVAFTQVNSEDK 15 1 0 Unmodified _TCTTVAFTQVNSEDK_ 0 0 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 854.9016 2 850.893434 1699.77231 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.092 1 57.092 56.592 57.592 0 0 0 0 0.012502 1 32987 45.257 29.991 1 33841 1648 12828 13183 52749 52749 TCTTVAFTQVNSEDK 15 1 0 Unmodified _TCTTVAFTQVNSEDK_ 0 0 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 854.9007 2 850.893434 1699.77231 64662.14 0.703 0.00059818 -0.31245 -0.00026586 0.39055 0.00033232 850.89336543517 854.900395922645 66.913 1.44 66.913 66.502 67.942 0 627 99 11 0 0 0 5.0874E-15 3 34686 126.1 126.1 1 0.78914 0.67931 0 92567000 49503000 43064000 33842 1648 12828 13183 52750;52751;52752 52750 TCTTVAFTQVNSEDK 15 1 0 Unmodified _TCTTVAFTQVNSEDK_ 0 0 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.9009 2 850.893434 1699.77231 65188.25 0.54196 0.00046115 -0.37135 -0.00031598 0.17061 0.00014517 850.893346943918 854.900363418157 67.493 1.3252 67.493 67.1 68.426 0 647 90 12 0 0 0 6.7186E-22 3 34275 142.1 142.1 1 0.82116 0.69798 0 76472000 41475000 34996000 33843 1648 12828 13183 52753;52754;52755 52754 TDAPQPDVKEEEEEKEEEK 19 3 0 Unmodified _TDAPQPDVKEEEEEKEEEK_ 0 0 2 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.025 3 753.676408 2258.0074 69810.06 0.86264 0.00065015 0.16571 0.00012489 1.0283 0.00077504 753.676539968182 761.690546038638 22.816 0.28522 22.816 22.66 22.946 0 62 15 7 0 0 0 0.00055665 2 8755 38.453 38.453 1 0.91593 1.1025 0 9852200 4821800 5030500 33844 1526 12829 13184 52756;52757 52756 TDAPQPDVKEEEEEKEEEK 19 3 0 Unmodified _TDAPQPDVKEEEEEKEEEK_ 0 0 2 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 754.011 3 753.676408 2258.0074 70349.64 0.63928 0.00048181 0.047554 3.584E-05 0.68684 0.00051765 754.010795987957 761.69075960486 22.497 0.2651 22.497 22.346 22.611 0 53 10 8 0 0 0 1.7838E-05 1 8472 63.302 63.302 1 0.82893 0.9689 0 12242000 6006500 6235900 33845 1526 12829 13184 52758 52758 TDAPQPDVKEEEEEKEEEK 19 3 0 Unmodified _TDAPQPDVKEEEEEKEEEK_ 0 0 2 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.6914 3 753.676408 2258.0074 71321.12 0.38262 0.00028837 0.015549 1.1719E-05 0.39817 0.00030009 753.676128452312 761.69077149147 26.342 0.31144 26.342 26.19 26.502 0 52 13 6 0 0 0 0.01718 1 9423 23.799 23.799 1 0.51263 0.50701 0 1281700 759590 522080 33846 1526 12829 13184 52759 52759 TDASSASSFLDSDELER 17 0 1 Unmodified _TDASSASSFLDSDELER_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q6MZY7;A0A0U1RQW2;H0Y4X3 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 915.9064 2 915.405417 1828.79628 64096.71 0.45192 0.00041369 0.48614 0.00044502 0.93806 0.00085871 915.406277301984 920.409043633551 87.907 0.72243 87.907 87.606 88.329 0 213 62 5 0 0 0 1.9217E-12 4 52931 113.35 104.62 1 0.6769 0.70582 0 21476000 10651000 10825000 33847 588 12830 13185 52760;52761;52762;52763 52762 TDASSASSFLDSDELER 17 0 1 Unmodified _TDASSASSFLDSDELER_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q6MZY7;A0A0U1RQW2;H0Y4X3 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 920.4083 2 915.405417 1828.79628 63915.32 0.50571 0.00046293 0.30875 0.00028263 0.81446 0.00074557 915.406197128852 920.408981660897 87.208 0.62804 87.208 86.905 87.533 0 225 52 6 0 0 0 6.93E-18 4 53680 127.79 119.06 1 0.77539 0.84917 0 32117000 17841000 14276000 33848 588 12830 13185 52764;52765;52766;52767 52767 TDASSASSFLDSDELER 17 0 1 Unmodified _TDASSASSFLDSDELER_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q6MZY7;A0A0U1RQW2;H0Y4X3 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 920.4093 2 915.405417 1828.79628 64075.61 0.28634 0.00026212 0.20626 0.00018881 0.49261 0.00045093 915.405572996383 920.409504402965 100.59 0.66637 100.59 100.24 100.91 0 244 51 7 0 0 0 0.02002 1 56798 25.322 24.873 1 0.59124 0.49393 0 10408000 6266700 4141400 33849 588 12830 13185 52768 52768 TDASSASSFLDSDELER 17 0 1 Unmodified _TDASSASSFLDSDELER_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q6MZY7;A0A0U1RQW2;H0Y4X3 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 915.4036 2 915.405417 1828.79628 64429.44 0.34291 0.0003139 0.26427 0.00024192 0.60719 0.00055582 915.40540395654 920.409699659937 100.6 0.72182 100.6 100.3 101.02 0 265 53 7 0 0 0 9.6818E-05 3 55976 60.364 59.373 1 0.63095 0.52304 0 7835900 4559100 3276900 33850 588 12830 13185 52769;52770;52771 52769 TDDEDFVPSDASPPK 15 1 0 Unmodified _TDDEDFVPSDASPPK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.3636 2 810.357207 1618.69986 68072.41 0.4266 0.0003457 -0.041874 -3.3933E-05 0.38473 0.00031177 810.356867823395 814.364393870043 65.078 0.63159 65.078 64.719 65.351 -7.6294E-06 250 54 6 0 0 0 4.4911E-10 3 37276 113.61 113.61 1 1.023 1.0033 0 22677000 11714000 10963000 33851 1471 12831 13186 52772;52773;52774 52773 TDDEDFVPSDASPPK 15 1 0 Unmodified _TDDEDFVPSDASPPK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.3583 2 810.357207 1618.69986 67777.94 0.51663 0.00041866 -0.24506 -0.00019859 0.27157 0.00022007 810.356017174963 814.364361602591 63.994 0.81676 63.994 63.722 64.539 3.8147E-06 312 76 6 0 0 0 2.626E-22 2 37639 147.26 147.26 1 0.94904 0.99225 0 24260000 10784000 13476000 33852 1471 12831 13186 52775;52776 52776 TDDEDFVPSDASPPK 15 1 0 Unmodified _TDDEDFVPSDASPPK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 814.3646 2 810.357207 1618.69986 68907.89 0.68811 0.00055762 0.15859 0.00012851 0.8467 0.00068613 810.858923560226 814.364473590003 74.722 0.54715 74.722 74.456 75.003 0 170 38 6 0 0 0 0.032526 2 39629 26.412 26.412 1 1.0997 0.86105 0 3210200 1295800 1914400 33853 1471 12831 13186 52777;52778 52777 TDDEDFVPSDASPPK 15 1 0 Unmodified _TDDEDFVPSDASPPK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 814.3649 2 810.357207 1618.69986 68814.9 0.48153 0.00039021 0.12641 0.00010243 0.60794 0.00049264 810.858769172478 814.364428243499 75.254 0.59239 75.254 74.918 75.511 7.6294E-06 175 43 7 0 0 0 0.0028996 2 39171 43.604 43.604 1 0.99908 0.80272 0 2485400 1410900 1074500 33854 1471 12831 13186 52779;52780 52779 TDEAFFDSENDPEK 14 1 0 Unmodified _TDEAFFDSENDPEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.3469 2 822.339014 1642.66348 67582.74 0.64078 0.00052694 -0.017232 -1.4171E-05 0.62355 0.00051277 822.338711528895 826.34633573656 62.997 0.76708 62.997 62.64 63.407 0 393 74 8 0 0 0 2.3261E-05 2 35996 97.163 96.503 1 0.99706 1.091 0 51781000 25842000 25939000 33855 897 12832 13187 52781;52782 52781 TDEAFFDSENDPEK 14 1 0 Unmodified _TDEAFFDSENDPEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.3398 2 822.339014 1642.66348 67747.13 0.71372 0.00058692 -0.10726 -8.8201E-05 0.60647 0.00049872 822.338729062981 826.346115400973 62.03 0.91607 62.03 61.574 62.49 0 399 86 6 0 0 0 0.00011216 2 36184 83.182 82.94 1 0.97904 1.0504 0 37284000 16609000 20674000 33856 897 12832 13187 52783;52784 52784 TDEAFFDSENDPEK 14 1 0 Unmodified _TDEAFFDSENDPEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 826.3474 2 822.339014 1642.66348 66672.22 0.67647 0.00055629 0.029614 2.4352E-05 0.70608 0.00058064 822.338833463028 826.346248647382 72.391 0.86306 72.391 72.088 72.951 0 348 64 8 0 0 0 0.0024456 2 38059 48.822 48.822 1 1.2054 0.96356 0 8947000 4304600 4642300 33857 897 12832 13187 52785;52786 52785 TDEAFFDSENDPEK 14 1 0 Unmodified _TDEAFFDSENDPEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 822.3386 2 822.339014 1642.66348 67829.03 0.63298 0.00052052 0.15158 0.00012465 0.78456 0.00064517 822.33889188691 826.346247726505 73.046 0.91476 73.046 72.655 73.569 0 348 69 6 0 0 0 0.026341 2 38056 32.159 32.159 1 1.2165 0.99814 0 9014000 3936000 5078000 33858 897 12832 13187 52787;52788 52788 TDEFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TDEFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 870.0733 3 867.401501 2599.18267 64862.5 0.60962 0.00052879 -0.046395 -4.0243E-05 0.56323 0.00048854 867.735821116219 870.072988228217 88.5 1.029 88.5 88.057 89.086 0 682 76 11 0 0 0 3.6886E-38 2 53162 140.45 140.45 1 1.6661 1.9359 0 250220000 101500000 148720000 33859 639 12833 13188 52789;52790 52790 TDEFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TDEFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.7366 3 867.401501 2599.18267 64699.16 0.63785 0.00055327 0.041745 3.621E-05 0.67959 0.00058948 867.735982647443 870.407144347204 87.581 0.89806 87.581 87.256 88.154 0 606 72 11 0 0 0 3.4555E-17 3 53799 108.96 108.96 1 1.6507 1.9237 0 252360000 90884000 161480000 33860 639 12833 13188 52791;52792;52793 52792 TDEFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TDEFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.4232 3 867.401501 2599.18267 66875.16 0.77506 0.00067229 -1.8767 -0.0016278 -1.1016 -0.00095554 867.734377076915 870.404083510906 88.921 0.33789 88.921 88.782 89.12 0 71 28 5 0 0 0 0.0011627 1 54771 26.849 26.849 1 2.0228 2.1829 0 21814000 5894300 15920000 33861 639 12833 13188 52794 52794 TDEFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TDEFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.4078 3 867.401501 2599.18267 70601.48 0.75212 0.00065239 -1.8818 -0.0016322 -1.1296 -0.00097985 867.734208615926 870.405252051536 89.534 0.31769 89.534 89.373 89.691 0 43 24 4 0 0 0 0.013477 1 55332 20.426 20.426 1 1.9126 1.9135 0 15476000 4631600 10845000 33862 639 12833 13188 52795 52795 TDEFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TDEFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.411 3 867.401501 2599.18267 62876.92 0.66045 0.00057287 0.23945 0.0002077 0.8999 0.00078057 868.071126899696 870.406973021657 89.864 0.056107 89.864 89.834 89.89 0 10 4 4 0 0 0 0.013259 1 55532 20.496 19.822 1 1.6503 1.6498 0 6641900 2884400 3757500 33863 639 12833 13188 52796 52796 TDEFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TDEFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 867.7363 3 867.401501 2599.18267 64687.69 0.29837 0.00025881 0.1536 0.00013323 0.45197 0.00039204 867.736034317349 870.407215410037 101.28 0.92303 101.28 100.99 101.91 0 526 62 13 0 0 0 0.0012417 2 57262 26.157 26.157 1 2.1604 1.8622 0 98146000 31212000 66934000 33864 639 12833 13188 52797;52798 52798 TDEFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TDEFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 870.4046 3 867.401501 2599.18267 65181.38 0.22859 0.00019828 0.40187 0.00034859 0.63046 0.00054686 867.736216549928 870.407360545105 101.15 0.77161 101.15 100.86 101.63 -7.6294E-06 437 47 13 0 0 0 0.0011627 2 56286 26.849 26.849 1 2.1867 1.8625 0 87228000 28254000 58975000 33865 639 12833 13188 52799;52800 52799 TDESLDWDSSLVK 13 1 0 Unmodified _TDESLDWDSSLVK_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8VWY4;F8VQZ5;F8VV37;F8W1E5;F8W1T4 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.8606 2 747.851561 1493.68857 72971.51 0.80093 0.00059897 -0.052182 -3.9024E-05 0.74875 0.00055995 747.850851092733 751.859215211679 105.71 0.317 105.71 105.59 105.91 7.6294E-06 51 18 5 0 0 0 0.0054707 1 60294 47.288 35.074 1 1.0224 0.86722 0 1486100 651910 834180 33866 68 12834 13189 52801 52801 TDESLDWDSSLVK 13 1 0 Unmodified _TDESLDWDSSLVK_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8VWY4;F8VQZ5;F8VV37;F8W1E5;F8W1T4 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 752.3611 2 747.851561 1493.68857 NaN NaN NaN 0.50644 0.00037874 NaN NaN NaN NaN 105.5 0.57584 105.5 105.26 105.84 0 0 0 0 0.054201 1 59284 39.58 30.392 1 NaN NaN 0 1154400 0 1154400 33867 68 12834 13189 52802 52802 TDFSLSISNSSDVSAK 16 1 0 Unmodified _TDFSLSISNSSDVSAK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 833.4042 2 829.399406 1656.78426 68784.02 0.80432 0.0006671 -0.87025 -0.00072178 -0.065925 -5.4678E-05 829.39916033827 833.90692566368 95.187 0.89761 95.187 94.818 95.716 0 221 64 6 0 0 0 0.0093452 1 53125 33.968 33.968 1 1.6118 1.269 0 5751500 1698400 4053100 33868 104 12835 13190 52803 52803 TDGENVFTGQSK 12 1 0 Unmodified _TDGENVFTGQSK_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.806 2 641.799131 1281.58371 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.714 1 33.714 33.214 34.214 0 0 0 0 0.00094564 1 16802 73.951 38.656 1 33869 505 12836 13191 52804 52804 TDGENVFTGQSK 12 1 0 Unmodified _TDGENVFTGQSK_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3066 2 641.799131 1281.58371 75143.65 0.41373 0.00026553 -0.97479 -0.00062562 -0.56107 -0.00036009 642.299755107128 645.806056468847 33.369 0.6979 33.369 32.962 33.66 0 161 60 5 0 0 0 0.0088077 2 16573 47.559 39.339 1 1.6571 1.6788 0 12967000 4149700 8817000 33870 505 12836 13191 52805;52806 52806 TDGENVFTGQSK 12 1 0 Unmodified _TDGENVFTGQSK_ 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.8068 2 641.799131 1281.58371 74774.22 0.35152 0.0002256 -0.072965 -4.6829E-05 0.27855 0.00017878 641.799586588793 645.806425138665 38.994 0.69183 38.994 38.608 39.3 0 199 53 5 0 0 0 0.062738 1 17123 30.55 30.55 1 2.7194 2.2315 0 5163500 1459700 3703700 33871 505 12836 13191 52807 52807 TDGTVEIYNLSANYFQEK 18 1 0 Unmodified _TDGTVEIYNLSANYFQEK_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1051.0033 2 1046.49711 2090.97967 59712.5 0.49661 0.0005197 -0.92506 -0.00096807 -0.42844 -0.00044837 1046.99642783216 1051.00496782729 111.15 0.55075 111.15 110.87 111.42 0 226 37 8 0 0 0 4.0492E-30 3 69788 145.81 145.81 1 1.0528 1.1337 0 40797000 19254000 21543000 33872 1955 12837 13192 52808;52809;52810 52809 TDGTVEIYNLSANYFQEK 18 1 0 Unmodified _TDGTVEIYNLSANYFQEK_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1046.9958 2 1046.49711 2090.97967 59402.29 0.57555 0.00060231 -0.9155 -0.00095807 -0.33995 -0.00035576 1046.99683957587 1051.00460842283 110.61 0.55861 110.61 110.33 110.89 0 246 41 9 0 0 0 0.00099345 1 71395 38.3 38.3 1 1.0013 1.1001 0 41868000 23706000 18162000 33873 1955 12837 13192 52811 52811 TDGTVEIYNLSANYFQEK 18 1 0 Unmodified _TDGTVEIYNLSANYFQEK_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1046.4969 2 1046.49711 2090.97967 58876.54 0.50789 0.00053151 0.0212 2.2185E-05 0.52909 0.00055369 1046.99915275029 1051.00602007712 122.14 0.60582 122.14 121.93 122.53 0 183 29 10 0 0 0 1.9068E-05 2 72775 73.386 72.197 1 1.2236 1.009 0 41658000 18120000 23538000 33874 1955 12837 13192 52812;52813 52813 TDGTVEIYNLSANYFQEK 18 1 0 Unmodified _TDGTVEIYNLSANYFQEK_ 0 0 0 Q969X6;H3BSH7;H3BPD7;I3L4T9 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1047 2 1046.49711 2090.97967 58875.54 0.57157 0.00059814 -0.14838 -0.00015528 0.42319 0.00044287 1046.99879825329 1050.50395374532 122.09 0.59139 122.09 121.81 122.4 0 184 28 9 0 0 0 2.1568E-39 2 71774 155.66 155.66 1 1.2461 1.0561 0 63460000 26971000 36490000 33875 1955 12837 13192 52814;52815 52815 TDHPEIGEGKPTPALSEEASSSSIR 25 1 1 Unmodified _TDHPEIGEGKPTPALSEEASSSSIR_ 0 0 1 B4DS66;Q16891;B4DKR1;Q05DN3 B4DS66;Q16891 Q16891 IMMT MICOS complex subunit MIC60 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.8188 4 649.568777 2594.246 NaN NaN NaN -0.51867 -0.00033691 NaN NaN NaN NaN 55.993 0.63754 55.993 55.597 56.235 0 0 0 0 6.6713E-07 1 31536 53.998 40.81 1 NaN NaN 0 16879000 16879000 0 33876 1774;1029 12838 13193 52816 52816 TDHPEIGEGKPTPALSEEASSSSIR 25 1 1 Unmodified _TDHPEIGEGKPTPALSEEASSSSIR_ 0 0 1 B4DS66;Q16891;B4DKR1;Q05DN3 B4DS66;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.8188 4 649.568777 2594.246 74828.35 0.6854 0.00044521 -0.50726 -0.0003295 0.17813 0.00011571 649.819114929744 654.324755140441 53.991 0.65058 53.991 53.709 54.36 0 290 60 8 0 0 0 0.00016974 2 30883 34.715 34.715 1 0.9038 1.0463 0 33624000 15244000 18379000 33877 1774;1029 12838 13193 52817;52818 52818 TDHPEIGEGKPTPALSEEASSSSIR 25 1 1 Unmodified _TDHPEIGEGKPTPALSEEASSSSIR_ 0 0 1 B4DS66;Q16891;B4DKR1;Q05DN3 B4DS66;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.3248 4 649.568777 2594.246 74755.48 0.40107 0.00026052 -0.02053 -1.3336E-05 0.38054 0.00024719 649.818185266297 654.324910226502 64.97 0.42554 64.97 64.744 65.17 0 174 34 7 0 0 0 0.0051526 1 32777 22.755 19.914 1 1.9297 1.6208 0 4797400 1824600 2972800 33878 1774;1029 12838 13193 52819 52819 TDITYPAGFMDVISIDK 17 1 0 Oxidation (M) _TDITYPAGFM(ox)DVISIDK_ TDITYPAGFM(1)DVISIDK TDITYPAGFM(88.02)DVISIDK 0 1 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.973 2 951.463692 1900.91283 62605.12 0.80909 0.00076982 -0.61253 -0.0005828 0.19655 0.00018701 951.463360914871 955.470521200005 115.12 0.46196 115.12 114.81 115.27 0 229 29 10 0 0 0 6.4048E-07 2 73083 88.021 88.021 1 1.7894 2.024 0 86026000 32508000 53518000 33879 824 12839 13194 52820;52821 52821 654 TDITYPAGFMDVISIDK 17 1 0 Oxidation (M) _TDITYPAGFM(ox)DVISIDK_ TDITYPAGFM(1)DVISIDK TDITYPAGFM(88.09)DVISIDK 0 1 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 951.964 2 951.463692 1900.91283 62522.3 0.5294 0.0005037 -0.33617 -0.00031985 0.19323 0.00018385 951.46363982822 955.470699250265 114.65 0.45945 114.65 114.38 114.84 0 198 26 10 0 0 0 6.3669E-07 3 74521 88.092 88.092 1 1.8399 2.0588 0 109090000 38176000 70915000 33880 824 12839 13194 52822;52823;52824 52823 654 TDITYPAGFMDVISIDK 17 1 0 Oxidation (M) _TDITYPAGFM(ox)DVISIDK_ TDITYPAGFM(1)DVISIDK TDITYPAGFM(60.16)DVISIDK 0 1 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 955.9738 2 951.463692 1900.91283 62104.61 0.74199 0.00070598 -0.32858 -0.00031263 0.41341 0.00039335 951.964790898788 955.47063101141 126.49 0.55312 126.49 126.13 126.68 -7.6294E-06 147 18 12 0 0 0 4.7873E-05 1 75983 60.157 60.157 1 0.63741 0.51632 0 24187000 15073000 9113900 33881 824 12839 13194 52825 52825 654 TDITYPAGFMDVISIDK 17 1 0 Oxidation (M) _TDITYPAGFM(ox)DVISIDK_ TDITYPAGFM(1)DVISIDK TDITYPAGFM(51.46)DVISIDK 0 1 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 955.4713 2 951.463692 1900.91283 62164.7 0.46961 0.00044682 -0.19123 -0.00018195 0.27839 0.00026487 951.46365536287 955.470734675877 126.37 0.50731 126.37 126.07 126.58 7.6294E-06 191 21 11 0 0 0 8.8576E-05 1 75031 51.463 51.463 1 0.64715 0.53467 0 31713000 19340000 12373000 33882 824 12839 13194 52826 52826 654 TDITYPAGFMDVISIDK 17 1 0 Unmodified _TDITYPAGFMDVISIDK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.468 2 943.466235 1884.91792 NaN NaN NaN 0.59117 0.00055775 NaN NaN NaN NaN 126.21 0.50975 126.21 125.96 126.47 0 0 0 0 3.4908E-07 1 82076 97.551 97.551 1 NaN NaN 0 11671000 11671000 0 33883 824 12839 13195 52827 52827 TDITYPAGFMDVISIDK 17 1 0 Unmodified _TDITYPAGFMDVISIDK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.9695 2 943.466235 1884.91792 NaN NaN NaN 0.5106 0.00048173 NaN NaN NaN NaN 125.85 0.48859 125.85 125.65 126.13 0 0 0 0 0.0072451 1 83806 62.042 55.344 1 NaN NaN 0 11564000 11564000 0 33884 824 12839 13195 52828 52828 TDITYPAGFMDVISIDK 17 1 0 Unmodified _TDITYPAGFMDVISIDK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 947.4731 2 943.466235 1884.91792 NaN NaN NaN -0.37704 -0.00035572 NaN NaN NaN NaN 134.68 0.2012 134.68 134.56 134.76 0 0 0 0 0.006396 1 81472 48.467 40.742 1 NaN NaN 0 21224000 0 21224000 33885 824 12839 13195 52829 52829 TDLDDDITALK 11 1 0 Unmodified _TDLDDDITALK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.3138 2 610.306258 1218.59796 NaN NaN NaN 0.64515 0.00039374 NaN NaN NaN NaN 81.478 0.81819 81.478 81.091 81.91 0 0 0 0 5.9298E-08 1 48522 110.14 95.929 1 NaN NaN 0 28942000 0 28942000 33886 1851 12840 13196 52830 52830 TDLDDDITALK 11 1 0 Unmodified _TDLDDDITALK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.3132 2 610.306258 1218.59796 79166.48 0.44381 0.00027086 0.30471 0.00018597 0.74852 0.00045683 610.306370178131 614.313562465152 80.678 1.2399 80.678 80.26 81.5 0 391 104 6 0 0 0 0.00036566 2 49030 84.17 84.17 1 1.6387 1.8455 0 58270000 22871000 35399000 33887 1851 12840 13196 52831;52832 52832 TDLDDDITALK 11 1 0 Unmodified _TDLDDDITALK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.3137 2 610.306258 1218.59796 NaN NaN NaN 0.46089 0.00028129 NaN NaN NaN NaN 93.094 0.76713 93.094 92.831 93.598 0 0 0 0 0.046279 1 51968 45.368 25.581 1 NaN NaN 0 2395500 0 2395500 33888 1851 12840 13196 52833 52833 TDLDDDITALK 11 1 0 Unmodified _TDLDDDITALK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.3136 2 610.306258 1218.59796 78326.99 0.3459 0.00021111 0.49427 0.00030165 0.84017 0.00051276 610.30702647075 614.313481374216 93.164 0.76955 93.164 92.878 93.648 0 136 46 4 0 0 0 0.022516 1 51133 42.718 42.718 1 1.752 1.4199 0 2668300 876740 1791600 33889 1851 12840 13196 52834 52834 TDLDNSIGIK 10 1 0 Unmodified _TDLDNSIGIK_ 0 0 0 Q9H501;A0JLU5;Q05C10;Q8IWH6 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.7929 2 538.285128 1074.5557 80478.03 0.98189 0.00052854 -1.7243 -0.00092818 -0.74244 -0.00039964 538.785160937902 542.792291965261 58.729 0.42915 58.729 58.513 58.942 3.8147E-06 170 42 6 0 0 0 0.012557 2 34164 50.473 21.311 1 1.3876 1.43 0 32586000 14116000 18470000 33890 2033 12841 13197 52835;52836 52835 TDLEMQIEGLK 11 1 0 Oxidation (M) _TDLEM(ox)QIEGLK_ TDLEM(1)QIEGLK TDLEM(116.52)QIEGLK 0 1 0 B4DE59;K7EMS3;CON__P08779;P08779;B4DWU0;Q16195 B4DE59;CON__P08779 CON__P08779 KRT19;KRT16;keratin Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.8239 2 646.82376 1291.63297 NaN NaN NaN 0.54651 0.00035349 NaN NaN NaN NaN 82.255 0.46074 82.255 81.847 82.307 0 0 0 0 4.0544E-09 1 48954 116.52 86.442 1 NaN NaN 0 12359000 12359000 0 + 33891 1159;964 12842 13198 52837 52837 778 TDLEMQIEGLK 11 1 0 Oxidation (M) _TDLEM(ox)QIEGLK_ TDLEM(1)QIEGLK TDLEM(99.69)QIEGLK 0 1 0 B4DE59;K7EMS3;CON__P08779;P08779;B4DWU0;Q16195 B4DE59;CON__P08779 CON__P08779 KRT19;KRT16;keratin Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.8229 2 646.82376 1291.63297 NaN NaN NaN -0.41585 -0.00026898 NaN NaN NaN NaN 81.422 0.71962 81.422 80.905 81.624 0 0 0 0 1.4423E-05 1 49463 99.688 75.732 1 NaN NaN 0 21051000 21051000 0 + 33892 1159;964 12842 13198 52838 52838 778 TDLLLEPYNK 10 1 0 Unmodified _TDLLLEPYNK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.3334 2 603.324254 1204.63395 78053.64 0.81722 0.00049305 0.092282 5.5676E-05 0.9095 0.00054873 603.324087831688 607.331379341092 82.419 1.0629 82.419 81.887 82.95 0 503 89 8 0 0 0 2.1642E-30 2 49078 181.55 162.28 1 1.6807 1.9272 0 194070000 69694000 124380000 33893 81 12843 13199 52839;52840 52839 TDLLLEPYNK 10 1 0 Unmodified _TDLLLEPYNK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.3317 2 603.324254 1204.63395 78872.82 0.74096 0.00044704 0.020768 1.253E-05 0.76173 0.00045957 603.324001445512 607.331353184651 81.374 1.2305 81.374 80.792 82.022 0 505 105 8 0 0 0 1.6438E-12 2 49540 148.62 129.35 1 1.6455 1.8995 0 191210000 75721000 115490000 33894 81 12843 13199 52841;52842 52841 TDLLLEPYNK 10 1 0 Unmodified _TDLLLEPYNK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.3245 2 603.324254 1204.63395 79417.47 0.5765 0.00034781 0.24573 0.00014825 0.82222 0.00049607 603.324251813701 607.331416991508 93.762 1.3086 93.762 93.341 94.65 0 436 83 9 0 0 0 0.007236 2 52325 57.708 49.783 1 2.9438 2.3196 0 17617000 4443800 13173000 33895 81 12843 13199 52843;52844 52844 TDLLLEPYNK 10 1 0 Unmodified _TDLLLEPYNK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.3321 2 603.324254 1204.63395 78578.66 0.59391 0.00035832 0.15811 9.5392E-05 0.75202 0.00045371 603.324125107943 607.331367563963 93.64 1.3647 93.64 93.233 94.598 0 458 89 8 0 0 0 0.0030553 2 51296 66.27 56.913 1 2.9451 2.3661 0 15993000 4284100 11709000 33896 81 12843 13199 52845;52846 52845 TDLSTTVATPSSGLK 15 1 0 Unmodified _TDLSTTVATPSSGLK_ 0 0 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.3912 2 739.390853 1476.76715 70890.05 0.36349 0.00026876 -0.036679 -2.712E-05 0.32681 0.00024164 739.390954961589 743.397778440493 66.482 0.56454 66.482 66.228 66.793 0 184 44 6 0 0 0 8.7185E-06 2 38288 93.959 93.959 1 0.87406 0.89826 0 17493000 9316600 8176400 33897 1680 12844 13200 52847;52848 52848 TDLSTTVATPSSGLK 15 1 0 Unmodified _TDLSTTVATPSSGLK_ 0 0 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.3909 2 739.390853 1476.76715 70027.77 0.75519 0.00055838 -0.10698 -7.9103E-05 0.6482 0.00047928 739.390877808017 743.397745710955 65.45 0.52821 65.45 65.21 65.738 0 182 43 6 0 0 0 2.6006E-05 2 38580 86.911 86.911 1 0.86266 0.91496 0 23454000 12379000 11075000 33898 1680 12844 13200 52849;52850 52850 TDLSTTVATPSSGLK 15 1 0 Unmodified _TDLSTTVATPSSGLK_ 0 0 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.3929 2 739.390853 1476.76715 69701.77 0.63693 0.00047094 -0.0058084 -4.2947E-06 0.63113 0.00046665 739.390837686495 743.397871168854 76.225 0.82608 76.225 75.871 76.697 0 242 59 6 0 0 0 0.0005684 2 40554 54.7 54.7 1 2.1153 1.6991 0 7801700 2884800 4917000 33899 1680 12844 13200 52851;52852 52852 TDLSTTVATPSSGLK 15 1 0 Unmodified _TDLSTTVATPSSGLK_ 0 0 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 743.8998 2 739.390853 1476.76715 69385.19 0.5659 0.00041842 0.14929 0.00011038 0.71519 0.0005288 739.390732781465 743.39796003379 76.633 0.71218 76.633 76.295 77.007 0 225 50 6 0 0 0 0.0006361 2 39956 53.252 53.252 1 2.0673 1.6831 0 7303400 2240200 5063200 33900 1680 12844 13200 52853;52854 52853 TDMDNQIVVSDYAQMDR 17 0 1 2 Oxidation (M) _TDM(ox)DNQIVVSDYAQM(ox)DR_ TDM(1)DNQIVVSDYAQM(1)DR TDM(79.47)DNQIVVSDYAQM(79.47)DR 0 2 0 B7Z9L0;A8K3C3;P50991;B7Z2F4;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1021.9376 2 1016.93296 2031.85137 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.789 1 63.789 63.289 64.289 0 0 0 0 0.00010752 1 36619 79.466 71.742 1 33901 721 12845 13201 52855 52855 556;557 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK 35 1 0 Unmodified _TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK_ 0 0 0 B2R959;Q6NTA2;P14866 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 997.7448 3 994.405696 2980.19526 61800.21 -0.18668 -0.00018564 -0.49043 -0.00048768 -0.67711 -0.00067332 995.07345431895 997.410809359712 15.102 0.20502 15.102 15.013 15.218 0 26 4 9 0 0 0 0.0044188 1 2912 21.958 21.548 1 1.7262 1.8313 0 31468000 11300000 20168000 33902 865 12846 13202 52856 52856 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK 35 1 0 Unmodified _TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK_ 0 0 0 B2R959;Q6NTA2;P14866 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 994.7408 3 994.405696 2980.19526 61187.32 -0.2063 -0.00020515 0.45137 0.00044885 0.24507 0.0002437 994.740480549495 997.411874104391 16.496 0.37794 16.496 16.364 16.742 0 217 28 12 0 0 0 0.013604 1 2925 16.816 16.816 1 0.80501 0.65602 0 7560700 4061900 3498800 33903 865 12846 13202 52857 52857 TDNSSLSSPLNPK 13 1 0 Unmodified _TDNSSLSSPLNPK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.348 2 680.341163 1358.66777 NaN NaN NaN -0.17936 -0.00012203 NaN NaN NaN NaN 49.55 0.49442 49.55 49.387 49.882 0 0 0 0 0.0026129 1 27199 68.536 57.316 1 NaN NaN 0 36539000 0 36539000 33904 2103 12847 13203 52858 52858 TDNSSLSSPLNPK 13 1 0 Unmodified _TDNSSLSSPLNPK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3495 2 680.341163 1358.66777 NaN NaN NaN -0.49065 -0.00033381 NaN NaN NaN NaN 48.382 0.46647 48.382 48.189 48.656 0 0 0 0 1.1755E-09 2 26992 116.77 102.1 1 NaN NaN 0 34994000 0 34994000 33905 2103 12847 13203 52859;52860 52859 TDPSTLTEEEVSK 13 1 0 Unmodified _TDPSTLTEEEVSK_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.3516 2 718.343568 1434.67258 NaN NaN NaN -0.17956 -0.00012898 NaN NaN NaN NaN 47.212 0.46243 47.212 47.088 47.55 0 0 0 0 0.00020673 2 26151 89.266 71.83 1 NaN NaN 0 10466000 0 10466000 33906 418 12848 13204 52861;52862 52861 TDPSTLTEEEVSK 13 1 0 Unmodified _TDPSTLTEEEVSK_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.3507 2 718.343568 1434.67258 71462.68 0.72673 0.00052204 0.19439 0.00013964 0.92111 0.00066168 718.343332137164 722.35112379761 56.587 0.58741 56.587 56.316 56.903 3.8147E-06 118 41 4 0 0 0 0.059694 1 27928 27.149 25.305 1 0.91084 0.77323 0 1450300 653240 797080 33907 418 12848 13204 52863 52863 TDQADGPREPPQSAR 15 0 2 Unmodified _TDQADGPREPPQSAR_ 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.9323 3 542.260647 1623.76011 81479.58 0.85021 0.00046104 -0.38495 -0.00020874 0.46527 0.0002523 542.260442080379 548.932650781797 16.501 0.90824 16.501 16.083 16.991 0 280 41 10 0 0 0 0.00010208 2 3593 52.823 52.823 1 1.0305 1.122 0 75582000 34193000 41388000 33908 2059 12849 13205 52864;52865 52864 TDQADGPREPPQSAR 15 0 2 Unmodified _TDQADGPREPPQSAR_ 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.261 3 542.260647 1623.76011 81218.28 0.13903 7.5392E-05 -0.0073533 -3.9874E-06 0.13168 7.1404E-05 542.260677360307 548.932862839962 16.411 0.9974 16.411 15.94 16.937 0 370 54 10 0 0 0 6.273E-07 2 3646 78.69 78.69 1 1.0286 1.1818 0 55537000 27380000 28157000 33909 2059 12849 13205 52866;52867 52867 TDQADGPREPPQSAR 15 0 2 Unmodified _TDQADGPREPPQSAR_ 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.933 3 542.260647 1623.76011 80751.38 0.26003 0.000141 0.099883 5.4162E-05 0.35991 0.00019517 542.260636687529 548.932888205833 17.384 2.233 17.384 16.619 18.852 0 470 128 9 0 0 0 3.9262E-06 2 3745 83.54 83.54 1 2.0584 1.6915 0 28732000 8787700 19944000 33910 2059 12849 13205 52868;52869 52868 TDQADGPREPPQSAR 15 0 2 Unmodified _TDQADGPREPPQSAR_ 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.2609 3 542.260647 1623.76011 81625.49 0.10441 5.6618E-05 0.39566 0.00021455 0.50007 0.00027117 542.260804036633 548.933011449364 17.546 0.94473 17.546 17.14 18.085 0 452 72 10 0 0 0 6.6385E-05 2 3600 63.128 63.128 1 2.031 1.8734 0 16689000 5573200 11116000 33911 2059 12849 13205 52870;52871 52871 TDQFLVTDSGR 11 0 1 Unmodified _TDQFLVTDSGR_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.809 2 619.804217 1237.59388 76705.75 0.55767 0.00034565 0.010673 6.615E-06 0.56834 0.00035226 619.804080865561 624.808276182057 56.573 0.92118 56.573 56.235 57.156 -3.8147E-06 442 82 8 0 0 0 5.1476E-10 2 31758 129.88 99.307 1 0.92561 1.0302 0 78622000 37574000 41048000 33912 2042 12850 13206 52872;52873 52873 TDQFLVTDSGR 11 0 1 Unmodified _TDQFLVTDSGR_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.8077 2 619.804217 1237.59388 76200.05 0.3052 0.00018916 0.13932 8.6349E-05 0.44451 0.00027551 619.804310361128 624.808259738628 55.652 1.0103 55.652 55.209 56.22 3.8147E-06 409 77 7 0 0 0 4.9533E-08 2 31678 117.52 85.76 1 0.90218 1.0291 0 95433000 53812000 41622000 33913 2042 12850 13206 52874;52875 52874 TDQFLVTDSGR 11 0 1 Unmodified _TDQFLVTDSGR_ 0 0 0 Q9H8H0;J3QLQ6 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.8089 2 619.804217 1237.59388 76914.68 0.33143 0.00020542 0.035161 2.1793E-05 0.36659 0.00022721 619.804237744793 624.808206821736 65.464 0.98994 65.464 65.037 66.026 0 372 73 6 0 0 0 0.0020959 1 32897 62.466 49.939 1 1.2424 1.0306 0 7777500 3735300 4042200 33914 2042 12850 13206 52876 52876 TDSDEEVAMLLDTVQK 16 1 0 Oxidation (M) _TDSDEEVAM(ox)LLDTVQK_ TDSDEEVAM(1)LLDTVQK TDSDEEVAM(169.23)LLDTVQK 0 1 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 909.9359 2 905.424764 1808.83497 64244.05 1.04 0.00094161 -1.1778 -0.0010664 -0.13788 -0.00012484 905.925387109611 909.93319822105 110.84 0.41499 110.84 110.65 111.06 0 106 25 6 0 0 0 5.5816E-45 3 69639 169.23 161.96 1 0.7214 0.72911 0 27455000 16062000 11393000 33915 1887 12851 13207 52877;52878;52879 52878 1734 TDSDEEVAMLLDTVQK 16 1 0 Oxidation (M) _TDSDEEVAM(ox)LLDTVQK_ TDSDEEVAM(1)LLDTVQK TDSDEEVAM(138.42)LLDTVQK 0 1 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 909.4328 2 905.424764 1808.83497 64241.04 0.56703 0.0005134 -0.90725 -0.00082145 -0.34022 -0.00030804 905.423777624258 909.431013978887 110.3 0.42876 110.3 110.11 110.54 7.6294E-06 120 28 6 0 0 0 8.5237E-25 2 70938 138.42 138.42 1 1.2718 1.3398 0 19846000 9174500 10671000 33916 1887 12851 13207 52880;52881 52880 1734 TDSDEEVAMLLDTVQK 16 1 0 Oxidation (M) _TDSDEEVAM(ox)LLDTVQK_ TDSDEEVAM(1)LLDTVQK TDSDEEVAM(51.21)LLDTVQK 0 1 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 909.4315 2 905.424764 1808.83497 NaN NaN NaN -0.47833 -0.00043309 NaN NaN NaN NaN 122.45 0.33441 122.45 122.3 122.63 0 0 0 0 0.0022693 1 73011 51.211 45.178 1 NaN NaN 0 2279800 0 2279800 33917 1887 12851 13207 52882 52882 1734 TDSDEEVAMLLDTVQK 16 1 0 Unmodified _TDSDEEVAMLLDTVQK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.9365 2 897.427306 1792.84006 65385.67 0.60349 0.00054159 -0.35768 -0.00032099 0.24581 0.0002206 897.427316378192 901.433501141581 129.19 0.46938 129.19 128.89 129.36 1.5259E-05 94 22 7 0 0 0 0.0031148 1 78045 37.998 37.998 1 1.9882 1.6021 0 2806100 929360 1876700 33918 1887 12851 13208 52883 52883 TDSDEEVAMLLDTVQK 16 1 0 Unmodified _TDSDEEVAMLLDTVQK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 901.4354 2 897.427306 1792.84006 65687.35 0.54231 0.00048669 -0.69652 -0.00062508 -0.15421 -0.00013839 897.928010897461 901.434200208727 128.99 0.54887 128.99 128.67 129.22 0 75 21 7 0 0 0 0.0027821 1 77072 39.424 38.375 1 2.257 1.7654 0 3387000 908830 2478200 33919 1887 12851 13208 52884 52884 TDSEATNIYLQLSK 14 1 0 Unmodified _TDSEATNIYLQLSK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.9116 2 791.901585 1581.78862 69264.6 0.90065 0.00071322 0.63529 0.00050309 1.5359 0.0012163 791.901475874196 795.90974526344 88.833 0.28532 88.833 88.675 88.96 0 38 23 4 0 0 0 3.1308E-06 2 54798 103.44 94.71 1 0.58726 0.59981 0 11984000 6867200 5117000 33920 873 12852 13209 52885;52886 52886 TDTESELDLISR 12 0 1 Unmodified _TDTESELDLISR_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.843 2 689.838453 1377.66235 74781.07 0.53798 0.00037112 0.3284 0.00022654 0.86638 0.00059766 689.83813621707 694.842941203405 93.626 0.55744 93.626 93.396 93.953 0 148 37 6 0 0 0 0.0033667 1 52326 56.225 50.224 1 1.1994 1.0027 0 3546100 1443500 2102600 33921 196 12853 13210 52887 52887 TDTESELDLISR 12 0 1 Unmodified _TDTESELDLISR_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.8435 2 689.838453 1377.66235 75057.52 0.5616 0.00038742 -0.4581 -0.00031601 0.1035 7.1401E-05 689.838183086019 694.842775365527 93.676 0.62543 93.676 93.389 94.014 0 177 41 7 0 0 0 0.014317 1 51459 43.68 43.68 1 1.1239 0.98951 0 2477800 1169600 1308300 33922 196 12853 13210 52888 52888 TDTLEDLFPTTK 12 1 0 Unmodified _TDTLEDLFPTTK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.8486 2 690.84829 1379.68203 72151.71 0.70735 0.00048867 -0.059682 -4.1231E-05 0.64767 0.00044744 690.848311488262 694.8552972807 105.18 1.6258 105.18 104.67 106.29 0 625 125 9 0 0 0 6.6917E-88 4 65421 228.98 228.98 1 0.35795 0.42187 0 329040000 241920000 87126000 33923 1476 12854 13211 52889;52890;52891;52892 52891 TDTLEDLFPTTK 12 1 0 Unmodified _TDTLEDLFPTTK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.8557 2 690.84829 1379.68203 72568.97 0.82892 0.00057266 -0.14302 -9.8804E-05 0.6859 0.00047385 690.848282448206 694.855191545336 104.62 1.6209 104.62 104.04 105.66 0 653 124 9 0 0 0 3.1363E-29 3 66128 166.55 166.55 1 0.35211 0.41387 0 361130000 264070000 97055000 33924 1476 12854 13211 52893;52894;52895 52894 TDTLEDLFPTTK 12 1 0 Unmodified _TDTLEDLFPTTK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.8562 2 690.84829 1379.68203 72705.7 0.34644 0.00023934 0.21355 0.00014753 0.55999 0.00038687 690.848489379182 694.855529442855 116.76 1.4647 116.76 116.38 117.84 7.6294E-06 310 62 11 0 0 0 7.3892E-30 3 68620 173.64 173.64 1 0.31963 0.2742 0 79714000 59486000 20229000 33925 1476 12854 13211 52896;52897;52898 52897 TDTLEDLFPTTK 12 1 0 Unmodified _TDTLEDLFPTTK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 690.8489 2 690.84829 1379.68203 72250.69 0.66435 0.00045896 -0.095239 -6.5796E-05 0.56911 0.00039317 690.848264406126 694.855199188078 116.8 1.716 116.8 116.26 117.98 -7.6294E-06 320 79 8 0 0 0 7.3892E-30 3 67545 173.64 173.64 1 0.31169 0.26484 0 74743000 55800000 18942000 33926 1476 12854 13211 52899;52900;52901 52899 TDTLHVIGGTNK 12 1 0 Unmodified _TDTLHVIGGTNK_ 0 0 0 A0A024R667;Q96FK6 A0A024R667 A0A024R667 C14orf150;WDR89 WD repeat-containing protein 89 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3362 2 628.335684 1254.65681 NaN NaN NaN 0.16628 0.00010448 NaN NaN NaN NaN 34.273 0.24461 34.273 34.132 34.376 0 0 0 0 0.00096888 1 17334 86.243 56.487 1 NaN NaN 0 5351500 5351500 0 33927 198 12855 13212 52902 52902 TDTNVLYER 9 0 1 Unmodified _TDTNVLYER_ 0 0 0 A0A087WVD7;D6RDH4;Q9Y3D8 A0A087WVD7 A0A087WVD7 TAF9;AK6 Adenylate kinase isoenzyme 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.7792 2 555.774928 1109.5353 81971.62 0.68203 0.00037905 -0.26254 -0.00014591 0.41948 0.00023314 556.276544550884 560.778732641863 42.269 0.62239 42.269 41.957 42.579 0 138 47 4 0 0 0 9.3674E-12 1 22384 155.84 138.6 1 0.96405 0.98618 0 34866000 18541000 16325000 33928 417 12856 13213 52903 52903 TDTNVLYER 9 0 1 Unmodified _TDTNVLYER_ 0 0 0 A0A087WVD7;D6RDH4;Q9Y3D8 A0A087WVD7 A0A087WVD7 TAF9;AK6 Adenylate kinase isoenzyme 6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.7779 2 555.774928 1109.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.11 1 41.11 40.61 41.61 0 0 0 0 8.9365E-06 1 22073 111.46 81.27 1 33929 417 12856 13213 52904 52904 TDVLTGLSIR 10 0 1 Unmodified _TDVLTGLSIR_ 0 0 0 Q6SPF0;E9PIW9;F8WDT5 Q6SPF0 Q6SPF0 SAMD1 Atherin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.8113 2 537.811313 1073.60807 NaN NaN NaN -0.33371 -0.00017947 NaN NaN NaN NaN 90.763 0.99374 90.763 90.354 91.348 0 0 0 0 0.032178 1 55005 51.436 29.972 1 NaN NaN 0 25494000 25494000 0 33930 1861 12857 13214 52905 52905 TDVLTGLSIR 10 0 1 Unmodified _TDVLTGLSIR_ 0 0 0 Q6SPF0;E9PIW9;F8WDT5 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.8157 2 537.811313 1073.60807 83608.61 0.58874 0.00031663 -0.32804 -0.00017642 0.2607 0.00014021 537.811394397056 542.815327659653 103.94 0.77481 103.94 103.54 104.32 0 177 51 4 0 0 0 0.0018846 2 59232 71.614 49.377 1 1.3886 1.193 0 6413700 2934000 3479700 33931 1861 12857 13214 52906;52907 52907 TDVLTGLSIR 10 0 1 Unmodified _TDVLTGLSIR_ 0 0 0 Q6SPF0;E9PIW9;F8WDT5 Q6SPF0 Q6SPF0 SAMD1 Atherin MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.8156 2 537.811313 1073.60807 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.82 1 103.82 103.32 104.32 0 0 0 0 6.5225E-05 1 58193 83.783 53.616 1 33932 1861 12857 13214 52908 52908 TDYNASVSVPDSSGPER 17 0 1 Unmodified _TDYNASVSVPDSSGPER_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.907 2 890.902844 1779.79114 64440.52 0.51108 0.00045532 0.22334 0.00019897 0.73441 0.00065429 890.902813642757 895.907215335798 55.168 0.72871 55.168 54.854 55.583 0 411 69 8 0 0 0 2.659E-09 2 30877 107.99 100.73 1 1.8182 2.0279 0 84449000 29174000 55276000 33933 102 12858 13215 52909;52910 52909 TDYNASVSVPDSSGPER 17 0 1 Unmodified _TDYNASVSVPDSSGPER_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.909 2 890.902844 1779.79114 64021.94 0.49252 0.00043879 -0.16651 -0.00014835 0.32601 0.00029044 890.902526783462 895.906906005738 54.244 0.63765 54.244 54.021 54.659 0 338 54 8 0 0 0 4.4996E-18 2 30890 131.35 116.93 1 1.8713 2.1328 0 101570000 34983000 66586000 33934 102 12858 13215 52911;52912 52911 TDYNASVSVPDSSGPER 17 0 1 Unmodified _TDYNASVSVPDSSGPER_ 0 0 0 B4DUQ1;A0A024R228;Q5EC54;P61978;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 891.4037 2 890.902844 1779.79114 65064.8 0.035196 3.1356E-05 0.36692 0.00032689 0.40212 0.00035825 890.902927176554 895.907317155864 65.287 0.74718 65.287 64.993 65.74 0 326 55 8 0 0 0 7.2202E-05 2 32877 68.277 62.432 1 1.149 0.95986 0 16189000 7767400 8422000 33935 102 12858 13215 52913;52914 52914 TDYTLSIANR 10 0 1 Unmodified _TDYTLSIANR_ 0 0 0 Q96P63 Q96P63 Q96P63 SERPINB12 Serpin B12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.2966 2 577.296027 1152.5775 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.185 1 63.185 62.685 63.685 3.8147E-06 0 0 0 0.0092902 1 37105 58.433 47.405 1 33936 1982 12859 13216 52915 52915 TDYVVRPSTGEEK 13 1 1 Unmodified _TDYVVRPSTGEEK_ 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.8806 2 740.867545 1479.72054 73998.19 0.97242 0.00072043 0.05998 4.4437E-05 1.0324 0.00076487 740.867659200216 749.87890843663 28.189 0.20283 28.189 28.059 28.262 0 40 14 4 0 0 0 0.00058075 2 13176 91.937 75.819 1 0.57804 0.64258 0 7682900 5421100 2261800 33937 135 12860 13217 52916;52917 52916 TDYVVRPSTGEEK 13 1 1 Unmodified _TDYVVRPSTGEEK_ 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.8674 2 740.867545 1479.72054 71648.66 0.35868 0.00026573 0.024358 1.8046E-05 0.38304 0.00028378 740.867869213313 749.878424682313 27.43 0.20467 27.43 27.3 27.505 1.9073E-06 39 9 6 0 0 0 4.7018E-09 2 12684 124.42 124.42 1 0.75865 0.85615 0 14752000 8822500 5929500 33938 135 12860 13217 52918;52919 52918 TEAEQQITEVFVLAER 16 0 1 Unmodified _TEAEQQITEVFVLAER_ 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 937.485 2 931.978355 1861.94216 62614.85 0.62391 0.00058147 -0.1031 -9.6084E-05 0.52082 0.00048539 932.479722626476 936.982345438519 117.87 0.61512 117.87 117.58 118.2 0 304 37 10 0 0 0 1.2476E-33 2 75362 153.38 146.68 1 1.6424 1.8985 0 161190000 61465000 99723000 33939 1569 12861 13218 52920;52921 52920 TEAEQQITEVFVLAER 16 0 1 Unmodified _TEAEQQITEVFVLAER_ 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 937.4852 2 931.978355 1861.94216 62559.74 0.54986 0.00051246 -0.24316 -0.00022662 0.30669 0.00028583 931.978312246107 936.982237292369 117.45 0.85961 117.45 116.88 117.74 7.6294E-06 315 51 10 0 0 0 2.7923E-68 2 76850 196.11 196.11 1 1.634 1.8789 0 203180000 81009000 122170000 33940 1569 12861 13218 52922;52923 52922 TEAEQQITEVFVLAER 16 0 1 Unmodified _TEAEQQITEVFVLAER_ 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 932.4797 2 931.978355 1861.94216 62502.34 0.67528 0.00062934 0.028716 2.6762E-05 0.70399 0.00065611 932.479724053235 936.98264662124 130.38 1.383 130.38 130.02 131.41 0 417 65 11 0 0 0 1.0998E-56 3 78873 180.09 180.09 1 2.8173 2.4376 0 125440000 34316000 91126000 33941 1569 12861 13218 52924;52925;52926 52925 TEAEQQITEVFVLAER 16 0 1 Unmodified _TEAEQQITEVFVLAER_ 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 932.483 2 931.978355 1861.94216 62894.38 0.9574 0.00089228 -0.052923 -4.9323E-05 0.90448 0.00084296 931.978521465897 936.982625133267 130.12 1.1581 130.12 129.8 130.96 0 307 47 11 0 0 0 4.7536E-58 2 77822 188.09 188.09 1 2.7916 2.4378 0 159680000 40811000 118870000 33942 1569 12861 13218 52927;52928 52928 TEAESWYQTK 10 1 0 Unmodified _TEAESWYQTK_ 0 0 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;H0YIN9 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.7864 2 621.785492 1241.55643 NaN NaN NaN 0.166 0.00010321 NaN NaN NaN NaN 39.272 0.35401 39.272 39.093 39.447 0 0 0 0 3.3081E-11 1 20867 121.64 40.955 1 NaN NaN 0 46883000 46883000 0 + 33943 1162 12862 13219 52929 52929 TEAESWYQTK 10 1 0 Unmodified _TEAESWYQTK_ 0 0 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;H0YIN9 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.7859 2 621.785492 1241.55643 NaN NaN NaN -0.10209 -6.3478E-05 NaN NaN NaN NaN 46.386 0.71703 46.386 46.142 46.86 -3.8147E-06 0 0 0 0.027002 1 21731 52.79 14.497 1 NaN NaN 0 3355800 3355800 0 + 33944 1162 12862 13219 52930 52930 TEALTQAFR 9 0 1 Unmodified _TEALTQAFR_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30;X6R2L4;M0QXI6 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.7794 2 518.774731 1035.53491 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.557 1 56.557 56.057 57.057 0 0 0 0 0.00060619 1 31865 101.54 57.193 1 33945 2120 12863 13220 52931 52931 TEALTQAFR 9 0 1 Unmodified _TEALTQAFR_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30;X6R2L4;M0QXI6 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.7793 2 518.774731 1035.53491 83787.85 0.27347 0.00014187 0.36231 0.00018796 0.63578 0.00032983 518.7748987041 523.778834591849 55.595 1.2108 55.595 55.181 56.391 0 344 92 7 0 0 0 1.0447E-11 2 31785 155 116.03 1 0.8062 0.92977 0 54893000 28899000 25993000 33946 2120 12863 13220 52932;52933 52933 TEALTQAFR 9 0 1 Unmodified _TEALTQAFR_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30;X6R2L4;M0QXI6 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.7792 2 518.774731 1035.53491 84619.18 0.44923 0.00023305 0.13289 6.8942E-05 0.58212 0.00030199 518.774664483179 523.778830863004 65.379 1.0869 65.379 65.004 66.091 0 330 82 6 0 0 0 0.003784 2 33699 70.919 54.716 1 1.1621 0.99424 0 5935500 2962300 2973200 33947 2120 12863 13220 52934;52935 52934 TEALTQAFR 9 0 1 Unmodified _TEALTQAFR_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30;X6R2L4;M0QXI6 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.7792 2 518.774731 1035.53491 83867.51 0.15818 8.2062E-05 0.37661 0.00019538 0.53479 0.00027744 518.774851718288 523.77891567018 65.768 1.1734 65.768 65.381 66.554 0 331 86 5 0 0 0 0.00092483 2 33261 92.439 77.288 1 1.0978 0.91083 0 5497500 2514800 2982600 33948 2120 12863 13220 52936;52937 52937 TECYITGWGETQGTFGEGLLK 21 1 0 Unmodified _TECYITGWGETQGTFGEGLLK_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1174.5507 2 1174.04918 2346.08381 NaN NaN NaN -0.058151 -6.8272E-05 NaN NaN NaN NaN 116.24 0.36739 116.24 116.01 116.38 0 0 0 0 0.016938 1 74142 33.204 28.735 1 NaN NaN 0 4391900 4391900 0 + 33949 1157 12864 13221 52938 52938 TECYITGWGETQGTFGEGLLK 21 1 0 Unmodified _TECYITGWGETQGTFGEGLLK_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1174.0553 2 1174.04918 2346.08381 NaN NaN NaN -0.18211 -0.00021381 NaN NaN NaN NaN 115.75 0.30003 115.75 115.57 115.87 7.6294E-06 0 0 0 0.018552 1 75528 32.275 24.364 1 NaN NaN 0 5186100 5186100 0 + 33950 1157 12864 13221 52939 52939 TECYITGWGETQGTFGEGLLK 21 1 0 Unmodified _TECYITGWGETQGTFGEGLLK_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1174.5486 2 1174.04918 2346.08381 NaN NaN NaN -0.25939 -0.00030454 NaN NaN NaN NaN 127.85 0.54477 127.85 127.59 128.14 -7.6294E-06 0 0 0 0.020215 1 77051 31.319 28.893 1 NaN NaN 0 5941700 5941700 0 + 33951 1157 12864 13221 52940 52940 TEDFIIDTLELR 12 0 1 Unmodified _TEDFIIDTLELR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.888 2 732.882664 1463.75077 70896.2 0.9762 0.00071544 0.086069 6.3079E-05 1.0623 0.00077852 732.882139059102 737.886771561788 121.43 0.70259 121.43 121.18 121.88 0 226 45 7 0 0 0 9.786E-18 4 78450 140.16 125.5 1 0.78833 0.8027 0 30045000 15625000 14420000 33952 1676 12865 13222 52941;52942;52943;52944 52941 TEDFIIDTLELR 12 0 1 Unmodified _TEDFIIDTLELR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.3841 2 732.882664 1463.75077 NaN NaN NaN 0.36829 0.00026992 NaN NaN NaN NaN 120.98 0.88593 120.98 120.74 121.63 0 0 0 0 2.1569E-05 2 79938 100.88 83.442 1 NaN NaN 0 17437000 17437000 0 33953 1676 12865 13222 52945;52946 52945 TEDFIIDTLELR 12 0 1 Unmodified _TEDFIIDTLELR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.8839 2 732.882664 1463.75077 70291.99 0.85054 0.00062335 0.038214 2.8006E-05 0.88875 0.00065135 732.882197188257 737.886771480471 133.82 0.67404 133.82 133.47 134.14 0 150 27 8 0 0 0 0.00022091 2 81435 83 78.846 1 0.9911 0.83501 0 9740700 5097400 4643300 33954 1676 12865 13222 52947;52948 52947 TEDFIIDTLELR 12 0 1 Unmodified _TEDFIIDTLELR_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.8832 2 732.882664 1463.75077 71245.03 1.1704 0.00085774 -0.16357 -0.00011988 1.0068 0.00073786 732.881831129709 737.886635423068 133.57 0.76033 133.57 133.24 134 0 157 30 7 0 0 0 2.0378E-05 3 80368 103.22 98 1 1.1388 0.9196 0 10830000 5493200 5336400 33955 1676 12865 13222 52949;52950;52951 52950 TEDGGEFEEGASENNAK 17 1 0 Unmodified _TEDGGEFEEGASENNAK_ 0 0 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.3734 2 892.366292 1782.71803 64073.79 0.59032 0.00052678 0.24282 0.00021668 0.83314 0.00074346 892.367141364548 896.373218663041 27.184 0.28606 27.184 27.031 27.317 0 71 13 8 0 0 0 2.2785E-57 2 12408 183.06 183.06 1 1.7109 1.79 0 12069000 5089900 6978800 33956 1388 12866 13223 52952;52953 52953 TEDGGEFEEGASENNAK 17 1 0 Unmodified _TEDGGEFEEGASENNAK_ 0 0 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.3752 2 892.366292 1782.71803 65266.68 0.82217 0.00073368 -0.059814 -5.3376E-05 0.76236 0.0006803 892.868272600903 896.373174645273 26.773 0.29756 26.773 26.607 26.905 1.9073E-06 56 13 6 0 0 0 1.9378E-46 3 12097 175.48 175.48 1 1.7723 1.7919 0 16406000 6589800 9816100 33957 1388 12866 13223 52954;52955;52956 52954 TEDGGEFEEGASENNAK 17 1 0 Unmodified _TEDGGEFEEGASENNAK_ 0 0 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 892.3666 2 892.366292 1782.71803 64995.11 0.21817 0.00019469 -0.022478 -2.0058E-05 0.1957 0.00017463 892.3662800175 896.373188478644 31.749 0.40206 31.749 31.565 31.967 0 107 22 7 0 0 0 0.06056 1 12992 21.55 21.55 1 0.86495 0.69509 0 2488100 1162300 1325800 33958 1388 12866 13223 52957 52957 TEDLFENR 8 0 1 Unmodified _TEDLFENR_ 0 0 0 Q92615;H0Y641;H0Y4V9 Q92615 Q92615 LARP4B La-related protein 4B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.2448 2 512.240721 1022.46689 NaN NaN NaN -0.2412 -0.00012355 NaN NaN NaN NaN 44.459 0.71443 44.459 44.209 44.923 0 0 0 0 0.01413 1 24274 70.919 61.403 1 NaN NaN 0 5606400 0 5606400 33959 1949 12867 13224 52958 52958 TEDPDLPAFYFDPLINPISHR 21 0 1 Unmodified _TEDPDLPAFYFDPLINPISHR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.4109 3 819.741018 2456.20123 66961.61 1.1213 0.00091915 0.22856 0.00018736 1.3498 0.0011065 820.075199637252 823.411773042762 129.73 1.0048 129.73 129.38 130.39 0 430 61 10 0 0 0 3.9688E-09 4 84899 81.967 81.967 1 0.91129 0.93467 0 25856000 12986000 12870000 33960 1854 12868 13225 52959;52960;52961;52962 52960 TEDPDLPAFYFDPLINPISHR 21 0 1 Unmodified _TEDPDLPAFYFDPLINPISHR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.741 3 819.741018 2456.20123 67691.51 0.92129 0.00075522 0.28709 0.00023534 1.2084 0.00099056 820.07502681693 823.077784952861 129.22 0.91046 129.22 128.89 129.8 0 388 61 10 0 0 0 3.5195E-16 4 86148 108.18 108.18 1 0.89529 0.97759 0 39192000 18016000 21176000 33961 1854 12868 13225 52963;52964;52965;52966 52965 TEEADLLQTK 10 1 0 Unmodified _TEEADLLQTK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.2965 2 574.295693 1146.57683 79536.43 0.80083 0.00045992 -0.11929 -6.8508E-05 0.68154 0.00039141 574.295671583877 578.30264313254 48.881 0.842 48.881 48.264 49.106 0 225 65 9 0 0 0 2.0735E-08 3 26601 121.73 103.29 1 0.90033 1.0624 0 355580000 186870000 168710000 33962 69 12869 13226 52967;52968;52969 52969 TEEADLLQTK 10 1 0 Unmodified _TEEADLLQTK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.3027 2 574.295693 1146.57683 79399.52 0.27718 0.00015918 0.0057041 3.2758E-06 0.28288 0.00016246 574.295638683354 578.302707685278 47.765 0.84943 47.765 47.34 48.189 0 308 59 8 0 0 0 8.0992E-17 2 26546 161.28 129.08 1 0.84332 0.99297 0 464330000 254160000 210160000 33963 69 12869 13226 52970;52971 52971 TEEASSGFLPGDR 13 0 1 Unmodified _TEEASSGFLPGDR_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.3221 2 683.317688 1364.62082 NaN NaN NaN -0.50601 -0.00034577 NaN NaN NaN NaN 55.497 0.47682 55.497 55.259 55.736 0 0 0 0 5.139E-06 1 31132 101.93 81.058 1 NaN NaN 0 8212600 0 8212600 33964 640 12870 13227 52972 52972 TEEASSGFLPGDR 13 0 1 Unmodified _TEEASSGFLPGDR_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.3207 2 683.317688 1364.62082 NaN NaN NaN 0.50032 0.00034188 NaN NaN NaN NaN 64.083 0.70702 64.083 63.743 64.451 0 0 0 0 0.0056187 1 32829 57.019 37.233 1 NaN NaN 0 1781900 0 1781900 33965 640 12870 13227 52973 52973 TEEASSGFLPGDR 13 0 1 Unmodified _TEEASSGFLPGDR_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2;E9PMP7;H0Y424 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.3221 2 683.317688 1364.62082 NaN NaN NaN 0.44598 0.00030475 NaN NaN NaN NaN 64.663 0.75006 64.663 64.232 64.983 0 0 0 0 0.004177 1 32648 62.408 42.621 1 NaN NaN 0 1713200 0 1713200 33966 640 12870 13227 52974 52974 TEEELQAILEAK 12 1 0 Unmodified _TEEELQAILEAK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3625 2 687.361564 1372.70858 73183.16 0.64542 0.00044364 0.010126 6.9604E-06 0.65554 0.0004506 687.361665677587 691.3684783291 97.162 1.1752 97.162 96.636 97.811 0 400 101 6 0 0 0 4.2067E-29 1 59488 163.38 136.49 1 0.81651 0.89304 0 51548000 27684000 23864000 33967 493 12871 13228 52975 52975 TEEELQAILEAK 12 1 0 Unmodified _TEEELQAILEAK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.3622 2 687.361564 1372.70858 73217.38 0.70727 0.00048615 0.14625 0.00010052 0.85351 0.00058667 687.361753319307 691.368573459693 96.337 1.5224 96.337 95.901 97.424 0 504 127 6 0 0 0 8.6582E-60 2 60362 201.33 175.39 1 0.80143 0.89697 0 83898000 45415000 38483000 33968 493 12871 13228 52976;52977 52977 TEEELQAILEAK 12 1 0 Unmodified _TEEELQAILEAK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.3694 2 687.361564 1372.70858 72208.09 0.74102 0.00050935 0.33262 0.00022863 1.0736 0.00073798 687.361724380171 691.368822071225 110.56 1.428 110.56 110.14 111.57 -7.6294E-06 325 67 7 0 0 0 8.5604E-23 2 63821 157.38 136.01 1 1.3028 1.0652 0 34351000 14457000 19894000 33969 493 12871 13228 52978;52979 52979 TEEELQAILEAK 12 1 0 Unmodified _TEEELQAILEAK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 691.3693 2 687.361564 1372.70858 72557.27 0.68873 0.0004734 0.16807 0.00011553 0.8568 0.00058893 687.361578276746 691.368643911094 110.43 1.0104 110.43 110.02 111.03 0 290 53 7 0 0 0 0.000191 2 62840 88.596 68.453 1 1.2584 1.0459 0 37700000 15901000 21798000 33970 493 12871 13228 52980;52981 52981 TEEGEIDYSAEEGENRR 17 0 2 Unmodified _TEEGEIDYSAEEGENRR_ 0 0 1 B7WPG3;C9IYN3;A8K894;D6W592;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9;A0A0S2Z610 B7WPG3 B7WPG3 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.8713 3 661.955729 1982.84536 77956.46 0.53718 0.00035559 0.24304 0.00016088 0.78022 0.00051647 661.955474313915 668.627963598789 37.498 0.29321 37.498 37.397 37.69 0 44 20 5 0 0 0 0.05425 1 16875 15.844 15.844 1 1.1307 1.036 0 1467800 896770 571000 33971 586 12872 13229 52982 52982 TEEGEIDYSAEEGENRR 17 0 2 Unmodified _TEEGEIDYSAEEGENRR_ 0 0 1 B7WPG3;C9IYN3;A8K894;D6W592;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9;A0A0S2Z610 B7WPG3 B7WPG3 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.9567 3 661.955729 1982.84536 74647.4 0.37062 0.00024533 0.92745 0.00061393 1.2981 0.00085927 661.957086880327 668.962176015254 37.845 0.29871 37.845 37.696 37.995 0 92 25 5 0 0 0 0.054462 1 16601 10.615 10.615 1 0.90076 0.80569 0 1220100 620380 599730 33972 586 12872 13229 52983 52983 TEEGPTLSYGR 11 0 1 Unmodified _TEEGPTLSYGR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.2916 2 605.290942 1208.56733 77388.98 0.59947 0.00036285 -0.39279 -0.00023775 0.20668 0.0001251 605.290755414964 610.294704581389 42.272 0.77758 42.272 42.065 42.843 0 270 58 7 0 0 0 3.6116E-06 2 22401 111.31 95.16 1 1.7855 2.0117 0 97993000 35964000 62029000 33973 542 12873 13230 52984;52985 52984 TEEGPTLSYGR 11 0 1 Unmodified _TEEGPTLSYGR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.2946 2 605.290942 1208.56733 77340.18 0.61266 0.00037084 -0.034232 -2.072E-05 0.57842 0.00035011 605.290911309686 610.294851768579 41.752 0.78759 41.752 41.345 42.133 0 282 69 6 0 0 0 0.0005548 3 22270 74.267 61 1 1.7564 2.0442 0 60497000 24928000 35570000 33974 542 12873 13230 52986;52987;52988 52986 TEEGPTLSYGR 11 0 1 Unmodified _TEEGPTLSYGR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.2911 2 605.290942 1208.56733 77795.07 0.34628 0.0002096 -0.58099 -0.00035167 -0.23472 -0.00014207 605.290839749093 610.29441836935 49.181 0.61852 49.181 48.883 49.501 0 227 50 6 0 0 0 0.019396 2 23945 44.309 39.526 1 1.5227 1.3053 0 6148800 1676900 4471800 33975 542 12873 13230 52989;52990 52990 TEEGPTLSYGR 11 0 1 Unmodified _TEEGPTLSYGR_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991 D6REM6 D6REM6 MATR3;DKFZp686K23100 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.7915 2 605.290942 1208.56733 78738.53 0.21395 0.0001295 -0.46219 -0.00027976 -0.24824 -0.00015026 605.290934414366 610.294369192282 49.573 0.67365 49.573 49.267 49.94 0 249 52 7 0 0 0 0.0081792 2 23607 51.268 46.655 1 1.6383 1.3653 0 6356200 1955000 4401200 33976 542 12873 13230 52991;52992 52992 TEEIAEEEETVFPK 14 1 0 Unmodified _TEEIAEEEETVFPK_ 0 0 0 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.899 2 825.890883 1649.76721 NaN NaN NaN -0.24053 -0.00019865 NaN NaN NaN NaN 81.109 0.92496 81.109 80.688 81.613 0 0 0 0 1.2609E-131 1 49620 237.84 221.7 1 NaN NaN 0 78054000 0 78054000 33977 2065 12874 13231 52993 52993 TEEIAEEEETVFPK 14 1 0 Unmodified _TEEIAEEEETVFPK_ 0 0 0 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 829.8984 2 825.890883 1649.76721 65839.66 0.83522 0.0006898 -0.17922 -0.00014802 0.656 0.00054178 825.890541957674 829.897853117249 94.278 0.94179 94.278 93.891 94.833 0 230 58 5 0 0 0 9.7987E-06 2 52647 99.215 99.215 1 1.3842 1.1214 0 24342000 9350700 14991000 33978 2065 12874 13231 52994;52995 52995 TEEIAEEEETVFPK 14 1 0 Unmodified _TEEIAEEEETVFPK_ 0 0 0 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.8984 2 825.890883 1649.76721 66092.69 0.85432 0.00070557 -0.0031984 -2.6415E-06 0.85112 0.00070293 825.89079192061 829.897947527086 94.262 1.1163 94.262 93.861 94.977 0 306 69 7 0 0 0 1.6091E-09 3 51794 119.45 119.45 1 1.4007 1.1229 0 21883000 8256100 13627000 33979 2065 12874 13231 52996;52997;52998 52998 TEEIDAVFHGAVWPQISR 18 0 1 Unmodified _TEEIDAVFHGAVWPQISR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.0167 3 685.681323 2054.02214 74591.22 1.127 0.00077274 0.034456 2.3626E-05 1.1614 0.00079636 686.015732853283 689.017484631226 111.52 0.54082 111.52 111.28 111.82 0 222 39 8 0 0 0 4.4844E-12 2 70158 91.457 91.457 1 1.0538 1.069 0 28002000 12221000 15781000 33980 1412 12875 13232 52999;53000 53000 TEEIDAVFHGAVWPQISR 18 0 1 Unmodified _TEEIDAVFHGAVWPQISR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.6819 3 685.681323 2054.02214 74261.13 0.58251 0.00039941 0.19787 0.00013568 0.78038 0.00053509 686.349837907592 689.351780202282 110.87 0.61114 110.87 110.58 111.19 -7.6294E-06 219 45 7 0 0 0 1.5819E-08 3 71370 79.97 79.97 1 1.1993 1.225 0 20772000 9207300 11565000 33981 1412 12875 13232 53001;53002;53003 53003 TEEIDAVFHGAVWPQISR 18 0 1 Unmodified _TEEIDAVFHGAVWPQISR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.3523 3 685.681323 2054.02214 72772.88 0.78738 0.00053989 0.064 4.3883E-05 0.85138 0.00058377 685.681551047597 689.351861990878 122.01 0.48028 122.01 121.73 122.21 0 123 23 8 0 0 0 7.325E-06 1 72667 70.335 70.335 1 1.6267 1.3982 0 7852300 2988300 4864000 33982 1412 12875 13232 53004 53004 TEEIDAVFHGAVWPQISR 18 0 1 Unmodified _TEEIDAVFHGAVWPQISR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3524 3 685.681323 2054.02214 72781.01 0.82272 0.00056412 -0.19031 -0.0001305 0.6324 0.00043363 685.681460411935 689.351440036304 121.81 0.57139 121.81 121.42 121.99 0 120 27 9 0 0 0 7.0353E-06 2 71593 70.942 70.942 1 1.6094 1.3298 0 8121300 2897700 5223600 33983 1412 12875 13232 53005;53006 53005 TEELEEESFPER 12 0 1 Unmodified _TEELEEESFPER_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.8342 2 747.833368 1493.65218 70510.31 0.55066 0.0004118 0.38073 0.00028472 0.93139 0.00069652 747.833220519784 752.838153314396 59.106 0.80354 59.106 58.712 59.515 3.8147E-06 423 63 8 0 0 0 1.2943E-48 2 33518 199.11 199.11 1 1.0219 1.1535 0 100700000 48785000 51914000 33984 2128 12876 13233 53007;53008 53007 TEELEEESFPER 12 0 1 Unmodified _TEELEEESFPER_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.8326 2 747.833368 1493.65218 70401.01 0.55434 0.00041456 0.16161 0.00012086 0.71595 0.00053541 747.833249030659 752.837818817825 58.097 1.0354 58.097 57.707 58.743 -3.8147E-06 412 84 8 0 0 0 6.123E-38 2 33634 183.67 183.67 1 1.0648 1.2163 0 90815000 41095000 49720000 33985 2128 12876 13233 53009;53010 53010 TEELEEESFPER 12 0 1 Unmodified _TEELEEESFPER_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.8331 2 747.833368 1493.65218 70372.54 0.61332 0.00045866 0.17997 0.00013459 0.79329 0.00059325 747.833620440475 752.837715057377 68.93 0.81012 68.93 68.53 69.34 0 351 57 8 0 0 0 2.8659E-08 2 35991 118.91 118.91 1 1.29 1.1064 0 8482700 3545600 4937100 33986 2128 12876 13233 53011;53012 53011 TEELEEESFPER 12 0 1 Unmodified _TEELEEESFPER_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 752.8384 2 747.833368 1493.65218 70620.27 0.50792 0.00037984 0.57815 0.00043236 1.0861 0.0008122 747.834257924885 752.837809006589 69.566 0.85018 69.566 69.156 70.006 0 318 59 8 0 0 0 0.00022137 2 35575 88.681 88.681 1 1.3248 1.1017 0 7449700 3576100 3873600 33987 2128 12876 13233 53013;53014 53014 TEELKPQVEEK 11 2 0 Unmodified _TEELKPQVEEK_ 0 0 1 A0A024RDB2;A0A024RDE5;Q9UN86;A8K6V7 A0A024RDB2 A0A024RDB2 G3BP2 Ras GTPase-activating protein-binding protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.8224 2 665.348457 1328.68236 74175.46 0.44987 0.00029932 0.52076 0.00034649 0.97063 0.00064581 665.348701893224 673.362814233066 24.634 0.2854 24.634 24.508 24.793 1.9073E-06 32 11 5 0 0 0 0.030082 1 10319 58.63 38.326 1 2.1014 2.5026 0 17770000 6000900 11769000 33988 382 12877 13234 53015 53015 TEELNREVATNSELVQSGK 19 1 1 Unmodified _TEELNREVATNSELVQSGK_ 0 0 1 CON__P02533;P02533;A0A024R1X6;CON__Q04695;Q04695;F5GWP8;Q14666;K7ESE1 CON__P02533;CON__Q04695 CON__P02533 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.0222 3 702.022073 2103.04439 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.864 1 61.864 61.364 62.364 -3.8147E-06 0 0 0 0.028527 1 31053 27.904 17.436 1 + 33989 1150;1168 12878 13235 53016 53016 TEESDFLLLVLK 12 1 0 Unmodified _TEESDFLLLVLK_ 0 0 0 Q6P158;Q59G60;B4DKW2 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.8922 2 703.8925 1405.77045 78494.57 0.82073 0.00057771 -0.034192 -2.4067E-05 0.78654 0.00055364 703.892597497932 707.899610201978 130.55 0.31226 130.55 130.4 130.71 0 49 18 4 0 0 0 2.1692E-05 2 85132 102.61 83.829 1 1.0018 1.1394 0 1866600 1125400 741230 33990 1850 12879 13236 53017;53018 53018 TEESDFLLLVLK 12 1 0 Unmodified _TEESDFLLLVLK_ 0 0 0 Q6P158;Q59G60;B4DKW2 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.8927 2 703.8925 1405.77045 77113.41 0.78164 0.00055019 0.27848 0.00019602 1.0601 0.00074621 703.892628879294 707.899941770449 130.09 0.28519 130.09 129.97 130.25 0 61 19 4 0 0 0 1.6108E-12 2 86924 127.3 99.558 1 0.81368 0.87736 0 3682100 2103700 1578500 33991 1850 12879 13236 53019;53020 53019 TEFLSLLAK 9 1 0 Unmodified _TEFLSLLAK_ 0 0 0 Q4KMR3;Q12965 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.3001 2 511.30005 1020.58555 NaN NaN NaN 0.2185 0.00011172 NaN NaN NaN NaN 106.96 0.61938 106.96 106.79 107.41 0 0 0 0 0.016072 1 66476 61.962 44.998 1 NaN NaN 0 5253200 5253200 0 33992 1703 12880 13237 53021 53021 TEFLSLLAK 9 1 0 Unmodified _TEFLSLLAK_ 0 0 0 Q4KMR3;Q12965 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.3008 2 511.30005 1020.58555 NaN NaN NaN 0.2766 0.00014143 NaN NaN NaN NaN 106.45 0.79913 106.45 105.97 106.77 0 0 0 0 0.0027333 1 67595 79.906 61.124 1 NaN NaN 0 8202600 8202600 0 33993 1703 12880 13237 53022 53022 TEFTLTEAVVESSR 14 0 1 Unmodified _TEFTLTEAVVESSR_ 0 0 0 Q15554;H3BR06;J3KSZ6;H3BTA7;V9GYM1 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.8969 2 784.89376 1567.77297 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.951 1 95.951 95.451 96.451 0 0 0 0 0.00261 1 58422 61.435 31.962 1 33994 1762 12881 13238 53023 53023 TEFTLTEAVVESSR 14 0 1 Unmodified _TEFTLTEAVVESSR_ 0 0 0 Q15554;H3BR06;J3KSZ6;H3BTA7;V9GYM1 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 785.3937 2 784.89376 1567.77297 68622.48 0.72361 0.00056796 -0.637 -0.00049998 0.086607 6.7977E-05 784.892376428757 789.898201552273 109.45 0.51215 109.45 109.2 109.71 -7.6294E-06 72 24 5 0 0 0 0.024016 1 63120 43.501 43.501 1 1.3207 1.123 0 2860300 1103600 1756800 33995 1762 12881 13238 53024 53024 TEFTLTEAVVESSR 14 0 1 Unmodified _TEFTLTEAVVESSR_ 0 0 0 Q15554;H3BR06;J3KSZ6;H3BTA7;V9GYM1 Q15554 Q15554 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 785.3946 2 784.89376 1567.77297 69618.63 0.76464 0.00060016 -0.51654 -0.00040543 0.2481 0.00019474 785.394576210907 790.399505265268 109.38 0.467 109.38 109.15 109.61 0 72 20 5 0 0 0 0.0012284 1 62099 68.44 63.127 1 1.0319 0.88115 0 2896500 1327400 1569100 33996 1762 12881 13238 53025 53025 TEGFIGLNSVHCVQGSYPPLLLK 23 1 0 Unmodified _TEGFIGLNSVHCVQGSYPPLLLK_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 844.1121 3 843.777187 2528.30973 67349.99 0.59716 0.00050387 -0.077853 -6.5691E-05 0.51931 0.00043818 844.111548777907 846.782930336982 126.67 0.42303 126.67 126.46 126.89 0 74 18 7 0 0 0 0.001267 1 75329 25.935 25.935 1 1.7847 1.3939 0 3429500 1291800 2137600 33997 646 12882 13239 53026 53026 TEGSLEDWDIAVQK 14 1 0 Unmodified _TEGSLEDWDIAVQK_ 0 0 0 Q15020;B4DYA2;B4DRG9;F8VV04;B4E3R6 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.8936 2 795.885935 1589.75732 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.338 1 93.338 92.838 93.838 0 0 0 0 0.0024097 1 56609 63.408 48.397 1 33998 1748 12883 13240 53027 53027 TEGTAHSSNTSDVDFTGASSAK 22 1 0 Unmodified _TEGTAHSSNTSDVDFTGASSAK_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.6608 3 723.989209 2168.9458 72290.34 0.56513 0.00040915 -0.13902 -0.00010065 0.42611 0.0003085 723.988987097146 726.995082949463 30.803 0.62605 30.803 30.412 31.038 -1.9073E-06 194 55 6 0 0 0 1.3811E-07 2 14900 55.734 55.734 1 1.2166 1.1971 0 19878000 9001600 10876000 33999 2143 12884 13241 53028;53029 53028 TEGTAHSSNTSDVDFTGASSAK 22 1 0 Unmodified _TEGTAHSSNTSDVDFTGASSAK_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.6617 3 723.989209 2168.9458 72077.11 0.56062 0.00040589 0.023472 1.6994E-05 0.5841 0.00042288 724.323596272807 726.660552973513 30.092 0.63355 30.092 29.748 30.382 0 262 49 8 0 0 0 1.1823E-07 4 14462 56.882 56.882 1 1.1778 1.1874 0 28066000 14966000 13100000 34000 2143 12884 13241 53030;53031;53032;53033 53030 TEGTAHSSNTSDVDFTGASSAK 22 1 0 Unmodified _TEGTAHSSNTSDVDFTGASSAK_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.9892 3 723.989209 2168.9458 70907.47 0.49885 0.00036116 -0.064848 -4.6949E-05 0.434 0.00031421 724.323502408476 726.6606251622 35.788 0.60035 35.788 35.498 36.098 0 341 48 10 0 0 0 2.2966E-05 2 15909 37.373 37.373 1 2.3008 1.7871 0 14879000 5044900 9833700 34001 2143 12884 13241 53034;53035 53035 TEGTAHSSNTSDVDFTGASSAK 22 1 0 Unmodified _TEGTAHSSNTSDVDFTGASSAK_ 0 0 0 Q9Y483;Q96G26;B4DZG1 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.3226 3 723.989209 2168.9458 70071.34 0.67534 0.00048894 -0.29649 -0.00021466 0.37885 0.00027429 723.988905117073 726.660459934533 35.931 0.53413 35.931 35.667 36.201 -3.8147E-06 271 46 8 0 0 0 0.001516 1 15519 25.604 25.604 1 2.3179 1.9116 0 11007000 3064200 7943300 34002 2143 12884 13241 53036 53036 TEIIILATR 9 0 1 Unmodified _TEIIILATR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.3195 2 515.318774 1028.623 83467.91 0.38134 0.00019651 0.16151 8.3228E-05 0.54284 0.00027974 515.318724814564 520.322734478945 88.513 1.1354 88.513 87.615 88.75 0 353 96 5 0 0 0 0.0012322 1 53367 88.136 67.581 1 1.2079 1.3528 0 89766000 39443000 50324000 34003 1511 12885 13242 53037 53037 TEIIILATR 9 0 1 Unmodified _TEIIILATR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.3192 2 515.318774 1028.623 83945.88 0.40945 0.000211 -0.18162 -9.3594E-05 0.22783 0.0001174 515.318552976691 520.322747104133 89.054 0.70999 89.054 88.738 89.448 0 219 54 6 0 0 0 0.0078131 2 53897 61.65 46.211 1 1.0926 1.2921 0 277650000 127310000 150340000 34004 1511 12885 13242 53038;53039 53039 TEIIILATR 9 0 1 Unmodified _TEIIILATR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.3184 2 515.318774 1028.623 84698.28 0.54085 0.00027871 -0.12534 -6.4592E-05 0.41551 0.00021412 515.318607699945 520.322716388071 87.927 1.7317 87.927 86.554 88.285 0 546 145 7 0 0 0 2.643E-17 2 54177 165.72 137.21 1 1.1326 1.3214 0 509350000 242060000 267300000 34005 1511 12885 13242 53040;53041 53041 TEIIILATR 9 0 1 Unmodified _TEIIILATR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.3189 2 515.318774 1028.623 85363.84 0.21886 0.00011278 0.32384 0.00016688 0.5427 0.00027966 515.318679736928 520.322782549555 100.45 1.7945 100.45 100.08 101.87 0 478 131 4 0 0 0 0.0022085 3 57143 75.378 59.997 1 1.0632 0.87259 0 12147000 5812900 6334100 34006 1511 12885 13242 53042;53043;53044 53043 TEIIILATR 9 0 1 Unmodified _TEIIILATR_ 0 0 0 P23396;Q53G83;E9PL09;E9PPU1;F2Z2S8;H0YCJ7;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.3188 2 515.318774 1028.623 84370.31 0.21505 0.00011082 0.27481 0.00014161 0.48986 0.00025243 515.318703289569 520.322791792715 100.25 1.7661 100.25 99.861 101.63 0 507 130 5 0 0 0 0.0064971 4 56138 64.04 53.626 1 1.0597 0.88888 0 16815000 7980500 8834000 34007 1511 12885 13242 53045;53046;53047;53048 53046 TEIISEVNHLDNDK 14 1 0 Unmodified _TEIISEVNHLDNDK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 817.9099 2 813.902116 1625.78968 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.347 1 63.347 62.847 63.847 0 0 0 0 0.0013748 1 36372 73.632 48.777 1 34008 1795 12886 13243 53049 53049 TEIISEVNHLDNDK 14 1 0 Unmodified _TEIISEVNHLDNDK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.9025 2 813.902116 1625.78968 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.421 1 63.421 62.921 63.921 0 0 0 0 0.019728 1 36417 44.543 27.107 1 34009 1795 12886 13243 53050 53050 TEIISEVNHLDNDK 14 1 0 Unmodified _TEIISEVNHLDNDK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.9092 2 813.902116 1625.78968 NaN NaN NaN -0.36096 -0.00029378 NaN NaN NaN NaN 61.548 0.15138 61.548 61.414 61.565 0 0 0 0 0.00028196 1 36026 81.92 57.576 1 NaN NaN 0 4075400 0 4075400 34010 1795 12886 13243 53051 53051 TEIISEVNHLDNDK 14 1 0 Unmodified _TEIISEVNHLDNDK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.9033 2 813.902116 1625.78968 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.509 1 61.509 61.009 62.009 0 0 0 0 0.0012283 1 36049 75.088 48.415 1 34011 1795 12886 13243 53052 53052 TEIISEVNHLDNDK 14 1 0 Unmodified _TEIISEVNHLDNDK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.6091 3 542.93717 1625.78968 82612.93 0.59283 0.00032187 0.086373 4.6895E-05 0.67921 0.00036877 542.937064105334 545.608555070819 72.728 0.56461 72.728 72.504 73.069 0 147 38 6 0 0 0 0.049197 1 38423 17.701 6.5953 1 2.1637 1.7072 0 3072200 1073500 1998700 34012 1795 12886 13243 53053 53053 TEIISEVNHLDNDK 14 1 0 Unmodified _TEIISEVNHLDNDK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.4131 2 813.902116 1625.78968 69157.08 0.5842 0.00047548 0.38983 0.00031728 0.97403 0.00079276 813.902056178712 817.909626408326 73.206 0.55205 73.206 72.924 73.476 -7.6294E-06 154 40 7 0 0 0 0.037484 1 37799 30.889 24.649 1 1.9342 1.5193 0 3296500 1060700 2235800 34013 1795 12886 13243 53054 53054 TEILPPFFK 9 1 0 Unmodified _TEILPPFFK_ 0 0 0 O75533 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.3111 2 546.310418 1090.60628 83306.77 0.88189 0.00048179 -0.091438 -4.9954E-05 0.79046 0.00043183 546.31018730816 550.317280083874 113.38 0.63138 113.38 113.1 113.73 -7.6294E-06 219 46 6 0 0 0 0.0087997 2 71641 60.76 53.53 1 1.2065 1.2613 0 16704000 7248900 9455600 34014 1408 12887 13244 53055;53056 53056 TEILPPFFK 9 1 0 Unmodified _TEILPPFFK_ 0 0 0 O75533 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.3102 2 546.310418 1090.60628 84406.34 0.63003 0.00034419 0.098178 5.3635E-05 0.7282 0.00039783 546.31025114125 550.317438378358 112.67 0.63464 112.67 112.38 113.02 0 180 42 6 0 0 0 0.0062893 3 72850 64.567 54.979 1 1.3605 1.4007 0 18071000 6985600 11086000 34015 1408 12887 13244 53057;53058;53059 53059 TEILPPFFK 9 1 0 Unmodified _TEILPPFFK_ 0 0 0 O75533 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.3174 2 546.310418 1090.60628 83030.38 0.72605 0.00039665 -0.084753 -4.6301E-05 0.64129 0.00035034 546.310306120229 550.317235387186 124.58 0.54519 124.58 124.31 124.86 0 86 23 5 0 0 0 0.040956 1 74601 41.652 37.718 1 0.61146 0.51652 0 1964000 1326400 637610 34016 1408 12887 13244 53060 53060 TEILPPFFK 9 1 0 Unmodified _TEILPPFFK_ 0 0 0 O75533 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.3101 2 546.310418 1090.60628 84896.58 0.6751 0.00036881 -0.14267 -7.7945E-05 0.53242 0.00029087 546.310265355153 550.317283707525 124.3 0.51135 124.3 124.08 124.59 0 80 21 5 0 0 0 0.05441 2 73521 36.701 32.767 1 0.69486 0.56527 0 1896000 1096500 799520 34017 1408 12887 13244 53061;53062 53061 TEIMSPLYQDEAPK 14 1 0 Oxidation (M) _TEIM(ox)SPLYQDEAPK_ TEIM(1)SPLYQDEAPK TEIM(58.17)SPLYQDEAPK 0 1 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 823.3978 2 819.389996 1636.76544 68541.98 0.68136 0.0005583 -0.10348 -8.4791E-05 0.57788 0.00047351 819.389734109205 823.396963598537 77.284 0.73279 77.284 76.964 77.697 0 231 48 6 0 0 0 0.00039263 1 40632 58.172 52.069 1 1.0308 0.8398 0 6711200 3497400 3213800 34018 1898 12888 13245 53063 53063 1742 TEIVFTGEK 9 1 0 Unmodified _TEIVFTGEK_ 0 0 0 A0A024R4E5;Q00341;B4DKR8;H0Y394;Q6ZS03;H7C0A4;Q5HYC5 A0A024R4E5 A0A024R4E5 HDLBP;DKFZp686L08115 Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.2787 2 512.27149 1022.52843 83381.05 0.12102 6.1996E-05 0.88964 0.00045574 1.0107 0.00051773 512.27168359204 516.278836253618 53.004 0.70091 53.004 52.707 53.408 0 206 53 6 0 0 0 0.0069772 1 29497 62.823 28.015 1 2.3019 2.4554 0 32040000 10458000 21582000 34019 154 12889 13246 53064 53064 TEIVFTGEK 9 1 0 Unmodified _TEIVFTGEK_ 0 0 0 A0A024R4E5;Q00341;B4DKR8;H0Y394;Q6ZS03;H7C0A4;Q5HYC5 A0A024R4E5 A0A024R4E5 HDLBP;DKFZp686L08115 Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.2788 2 512.27149 1022.52843 82444.52 0.21673 0.00011102 -0.035868 -1.8374E-05 0.18086 9.2649E-05 512.271698583129 516.278782600822 51.553 0.63634 51.553 51.369 52.006 3.8147E-06 154 50 5 0 0 0 0.0019814 1 29216 78.334 32.617 1 1.7037 1.7129 0 27406000 10053000 17352000 34020 154 12889 13246 53065 53065 TEKPPPEPGKPK 12 3 0 Unmodified _TEKPPPEPGKPK_ 0 0 2 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.5927 3 435.578477 1303.7136 88600.91 -0.52121 -0.00022703 0.21818 9.5034E-05 -0.30303 -0.00013199 435.578419159881 443.59272093189 15.067 0.32162 15.067 14.924 15.246 0 41 8 8 0 0 0 0.0006687 1 2844 67.252 64.029 1 0.80267 0.96613 0 31768000 17705000 14063000 34021 1435 12890 13247 53066 53066 TEKPPPEPGKPK 12 3 0 Unmodified _TEKPPPEPGKPK_ 0 0 2 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.8636 2 652.864077 1303.7136 74851.43 0.191 0.0001247 -0.17286 -0.00011285 0.018143 1.1845E-05 652.864011532825 664.885022506868 15.094 0.23835 15.094 14.944 15.182 0 15 5 4 0 0 0 0.015761 1 2862 59.426 48.275 1 0.36535 0.43975 0 9444300 4294200 5150100 34022 1435 12890 13247 53067 53067 TEKPPPEPGKPK 12 3 0 Unmodified _TEKPPPEPGKPK_ 0 0 2 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.8651 2 652.864077 1303.7136 75378.55 0.12336 8.0536E-05 0.7566 0.00049396 0.87996 0.0005745 652.864367215343 664.885782033355 15.115 0.41495 15.115 14.929 15.344 0 33 12 7 0 0 0 0.012809 1 2745 60.434 49.282 1 1.2075 1.4114 0 6962300 3867900 3094300 34023 1435 12890 13247 53068 53068 TELEDTLDSTAAQQELR 17 0 1 Unmodified _TELEDTLDSTAAQQELR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.465 2 960.463266 1918.91198 61970.94 0.63676 0.00061158 0.049598 4.7637E-05 0.68635 0.00065922 960.96465266628 965.467545047537 84.321 0.80991 84.321 84.028 84.838 0 431 63 10 0 0 0 1.2603E-45 2 50438 196.57 196.57 1 1.4874 1.7441 0 216590000 76829000 139760000 34024 81 12891 13248 53069;53070 53070 TELEDTLDSTAAQQELR 17 0 1 Unmodified _TELEDTLDSTAAQQELR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 965.4656 2 960.463266 1918.91198 NaN NaN NaN 2.0769 0.0019948 NaN NaN NaN NaN 84.849 0.062889 84.849 84.827 84.89 7.6294E-06 0 0 0 7.4006E-07 1 50930 86.467 71.906 1 NaN NaN 0 2905800 0 2905800 34025 81 12891 13248 53071 53071 TELEDTLDSTAAQQELR 17 0 1 Unmodified _TELEDTLDSTAAQQELR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 965.4669 2 960.463266 1918.91198 61616.19 0.71465 0.00068639 -0.010282 -9.8751E-06 0.70437 0.00067652 960.46318180029 965.467402331581 83.595 0.81357 83.595 83.225 84.038 0 469 65 9 0 0 0 5.157E-57 3 51013 176.25 176.25 1 1.4919 1.7029 0 145210000 60997000 84215000 34026 81 12891 13248 53072;53073;53074 53072 TELEDTLDSTAAQQELR 17 0 1 Unmodified _TELEDTLDSTAAQQELR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 965.469 2 960.463266 1918.91198 61973.01 0.3965 0.00038083 0.27287 0.00026208 0.66937 0.0006429 960.463252292017 965.467666778932 96.834 1.0083 96.834 96.484 97.493 0 329 52 11 0 0 0 6.9462E-05 2 54665 70.622 70.622 1 3.1102 2.6618 0 40002000 9535400 30467000 34027 81 12891 13248 53075;53076 53076 TELEDTLDSTAAQQELR 17 0 1 Unmodified _TELEDTLDSTAAQQELR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 960.4615 2 960.463266 1918.91198 61813.07 -0.034192 -3.284E-05 0.60626 0.00058229 0.57207 0.00054945 960.463662575277 965.468012395227 96.913 0.96187 96.913 96.522 97.484 0 301 46 10 0 0 0 0.012083 2 53486 39.509 39.509 1 3.2318 2.819 0 33085000 8212400 24873000 34028 81 12891 13248 53077;53078 53078 TELFIAAEGIHTGQFVYCGK 20 1 0 Unmodified _TELFIAAEGIHTGQFVYCGK_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.0404 3 747.70514 2240.09359 70359.3 0.70501 0.00052714 0.41936 0.00031356 1.1244 0.00084069 748.372527572968 750.710879290906 106.2 0.51083 106.2 105.9 106.41 -7.6294E-06 188 35 8 0 0 0 2.4238E-06 2 65765 53.779 50.54 1 0.98454 1.029 0 12127000 5712600 6414100 34029 1653 12892 13249 53079;53080 53079 TELFIAAEGIHTGQFVYCGK 20 1 0 Unmodified _TELFIAAEGIHTGQFVYCGK_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.039 3 747.70514 2240.09359 71696.71 0.75734 0.00056626 1.0215 0.00076378 1.7788 0.00133 748.039845186781 750.710939436234 105.31 0.5927 105.31 105.1 105.69 0 237 41 9 0 0 0 3.6525E-07 1 66796 66.874 66.874 1 0.91751 0.94013 0 31869000 17297000 14573000 34030 1653 12892 13249 53081 53081 TELFIAAEGIHTGQFVYCGK 20 1 0 Unmodified _TELFIAAEGIHTGQFVYCGK_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.3782 3 747.70514 2240.09359 69516.05 0.58157 0.00043484 0.29473 0.00022037 0.8763 0.00065521 748.039639164013 750.376687297474 116.75 0.72195 116.75 116.48 117.2 7.6294E-06 190 28 11 0 0 0 6.1118E-19 2 68564 100.97 100.97 1 0.92814 0.75239 0 25166000 12841000 12324000 34031 1653 12892 13249 53082;53083 53082 TELFIAAEGIHTGQFVYCGK 20 1 0 Unmodified _TELFIAAEGIHTGQFVYCGK_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1121.5575 2 1121.05407 2240.09359 57254.54 -0.14714 -0.00016495 0.6161 0.00069068 0.46896 0.00052573 1121.55708664706 1125.06147424421 116.75 0.43406 116.75 116.56 117 0 72 16 9 0 0 0 5.938E-06 1 68664 54.898 54.898 1 0.91212 0.72788 0 9372600 4957600 4414900 34032 1653 12892 13249 53084 53084 TELFIAAEGIHTGQFVYCGK 20 1 0 Unmodified _TELFIAAEGIHTGQFVYCGK_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.0391 3 747.70514 2240.09359 69873.69 0.74802 0.0005593 0.080886 6.0479E-05 0.82891 0.00061978 748.03949303546 750.710759892006 116.55 0.81672 116.55 116.28 117.1 7.6294E-06 220 36 11 0 0 0 4.1047E-08 2 67490 66.874 66.874 1 0.90657 0.72854 0 16655000 8394500 8260100 34033 1653 12892 13249 53085;53086 53086 TELFIAAEGIHTGQFVYCGK 20 1 0 Unmodified _TELFIAAEGIHTGQFVYCGK_ 0 0 0 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1125.0607 2 1121.05407 2240.09359 58199.95 0.29869 0.00033484 0.018493 2.0732E-05 0.31718 0.00035557 1121.05475803334 1125.56182981359 116.56 0.35849 116.56 116.38 116.74 0 75 15 7 0 0 0 0.00010576 1 67552 43.548 43.548 1 0.93261 0.75956 0 6788000 3499400 3288600 34034 1653 12892 13249 53087 53087 TELGLDLGLEPK 12 1 0 Unmodified _TELGLDLGLEPK_ 0 0 0 A0A024R9D2;Q86UE4;E5RJU9 A0A024R9D2 A0A024R9D2 MTDH Protein LYRIC ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8572 2 642.855918 1283.69728 NaN NaN NaN -0.17288 -0.00011114 NaN NaN NaN NaN 105.52 0.45976 105.52 105.4 105.86 0 0 0 0 0.042981 1 65388 51.092 21.282 1 NaN NaN 0 3330900 3330900 0 34035 275 12893 13250 53088 53088 TELGLDLGLEPK 12 1 0 Unmodified _TELGLDLGLEPK_ 0 0 0 A0A024R9D2;Q86UE4;E5RJU9 A0A024R9D2 A0A024R9D2 MTDH Protein LYRIC MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.8569 2 642.855918 1283.69728 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.87 1 104.87 104.37 105.37 0 0 0 0 0.0053097 1 66511 76.143 45.888 1 34036 275 12893 13250 53089 53089 TELGLDLGLEPK 12 1 0 Unmodified _TELGLDLGLEPK_ 0 0 0 A0A024R9D2;Q86UE4;E5RJU9 A0A024R9D2 A0A024R9D2 MTDH Protein LYRIC ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.8575 2 642.855918 1283.69728 NaN NaN NaN 0.81702 0.00052523 NaN NaN NaN NaN 117.1 0.43448 117.1 116.84 117.27 7.6294E-06 0 0 0 0.023542 1 68896 58.676 48.153 1 NaN NaN 0 2302000 2302000 0 34037 275 12893 13250 53090 53090 TELGLDLGLEPK 12 1 0 Unmodified _TELGLDLGLEPK_ 0 0 0 A0A024R9D2;Q86UE4;E5RJU9 A0A024R9D2 A0A024R9D2 MTDH Protein LYRIC MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.8581 2 642.855918 1283.69728 77035.5 0.70035 0.00045022 0.43107 0.00027712 1.1314 0.00072734 642.856257720127 646.862942912703 116.9 0.44038 116.9 116.66 117.1 7.6294E-06 71 19 5 0 0 0 0.0056981 1 67815 50.284 45.5 1 0.4782 0.38788 0 4404300 3368300 1036000 34038 275 12893 13250 53091 53091 TELHGQLISVEK 12 1 0 Unmodified _TELHGQLISVEK_ 0 0 0 H7BXE3;A0A024R5X3;Q9NWH9;H7C3F4;A0A024R5U7 H7BXE3 H7BXE3 SLTM SAFB-like transcription modulator ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.3787 2 677.372266 1352.72998 NaN NaN NaN -0.046044 -3.1189E-05 NaN NaN NaN NaN 49.495 0.3136 49.495 49.387 49.701 0 0 0 0 0.032252 1 27179 46.73 29.499 1 NaN NaN 0 4174100 0 4174100 34039 190 12894 13251 53092 53092 TELTQIK 7 1 0 Unmodified _TELTQIK_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 416.7431 2 416.742368 831.470183 95052.54 0.24489 0.00010206 0.27849 0.00011606 0.52338 0.00021812 416.742363404156 420.749533421067 32.497 0.6339 32.497 32.1 32.734 0 201 56 5 0 0 0 0.026944 2 16069 83.377 20.229 1 0.97945 0.97862 0 26526000 12801000 13725000 34040 741 12895 13252 53093;53094 53093 TEMENEFVLIK 11 1 0 Oxidation (M) _TEM(ox)ENEFVLIK_ TEM(1)ENEFVLIK TEM(86.62)ENEFVLIK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.3499 2 684.83941 1367.66427 73528.4 0.76165 0.00052161 0.37129 0.00025428 1.1329 0.00077589 684.83911886016 688.846344823161 84.929 0.98326 84.929 84.312 85.296 0 317 81 7 0 0 0 0.000162 2 50855 86.624 57.151 1 1.3185 1.482 0 70160000 32618000 37542000 + 34041 1156 12896 13253 53095;53096 53096 867 TEMENEFVLIK 11 1 0 Oxidation (M) _TEM(ox)ENEFVLIK_ TEM(1)ENEFVLIK TEM(90.63)ENEFVLIK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8473 2 684.83941 1367.66427 73250.94 0.96649 0.00066189 0.53287 0.00036493 1.4994 0.0010268 684.839148744303 688.846616240169 83.892 0.73299 83.892 83.401 84.134 0 278 60 8 0 0 0 0.00012122 2 51351 90.629 61.156 1 1.3511 1.5108 0 107880000 50499000 57382000 + 34042 1156 12896 13253 53097;53098 53097 867 TEMENEFVLIK 11 1 0 Oxidation (M) _TEM(ox)ENEFVLIK_ TEM(1)ENEFVLIK TEM(58.25)ENEFVLIK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.8397 2 684.83941 1367.66427 72680.59 0.82769 0.00056683 -0.086546 -5.927E-05 0.74114 0.00050756 684.839361920448 688.84617391437 97.137 0.81399 97.137 96.818 97.632 0 175 41 9 0 0 0 0.0020885 2 54684 58.246 37.376 1 1.1718 0.94036 0 7638100 3404100 4234000 + 34043 1156 12896 13253 53099;53100 53100 867 TEMENEFVLIK 11 1 0 Oxidation (M) _TEM(ox)ENEFVLIK_ TEM(1)ENEFVLIK TEM(45.6)ENEFVLIK 0 1 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.846 2 684.83941 1367.66427 73615.3 0.39651 0.00027155 0.23248 0.00015921 0.62899 0.00043076 684.839483853768 688.846442284841 96.993 0.64767 96.993 96.699 97.347 7.6294E-06 150 30 6 0 0 0 0.008173 1 53635 45.598 27.734 1 1.0981 0.89614 0 6328800 3216500 3112400 + 34044 1156 12896 13253 53101 53101 867 TEMENEFVLIK 11 1 0 Unmodified _TEMENEFVLIK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.8499 2 676.841953 1351.66935 74159.51 0.80716 0.00054632 -0.32026 -0.00021677 0.4869 0.00032955 676.842722215566 680.848861376576 110.76 0.46446 110.76 110.55 111.01 0 85 20 6 0 0 0 0.0020164 2 63987 63.076 39.045 1 2.3192 1.8042 0 3380500 973250 2407300 + 34045 1156 12896 13254 53102;53103 53102 TEMENEFVLIK 11 1 0 Unmodified _TEMENEFVLIK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;F8VP67;CON__H-INV:HIT000016045 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.8495 2 676.841953 1351.66935 74589.41 0.75855 0.00051342 -0.13343 -9.031E-05 0.62512 0.00042311 676.842332332081 680.84900975367 110.65 0.61658 110.65 110.37 110.99 0 118 32 6 0 0 0 0.00077159 1 62928 72.607 51.737 1 2.4383 1.9177 0 3852300 1140400 2711900 + 34046 1156 12896 13254 53104 53104 TEMQDNTYPEILR 13 0 1 Oxidation (M) _TEM(ox)QDNTYPEILR_ TEM(1)QDNTYPEILR TEM(99.28)QDNTYPEILR 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.883 2 813.37742 1624.74029 67009.7 0.66078 0.00053747 -0.031664 -2.5755E-05 0.62912 0.00051171 813.377531454732 818.381514489261 71.519 1.1994 71.519 70.992 72.191 7.6294E-06 464 100 8 0 0 0 9.3661E-06 1 41451 99.283 88.453 1 0.2414 0.26869 0 78727000 57861000 20866000 34047 1379 12897 13255 53105 53105 1047 TEMQDNTYPEILR 13 0 1 Oxidation (M) _TEM(ox)QDNTYPEILR_ TEM(1)QDNTYPEILR TEM(66.6)QDNTYPEILR 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.8835 2 813.37742 1624.74029 66770.77 0.55529 0.00045166 -0.016598 -1.3501E-05 0.53869 0.00043816 813.377564917092 818.381453581052 70.163 1.1339 70.163 69.796 70.93 0 497 92 8 0 0 0 0.00013583 1 41635 66.595 58.67 1 0.27988 0.3192 0 96574000 77032000 19542000 34048 1379 12897 13255 53106 53106 1047 TENNDHINLK 10 1 0 Unmodified _TENNDHINLK_ 0 0 0 A0A024R8S3;P61956 A0A024R8S3 A0A024R8S3 SUMO2 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.8675 3 399.866798 1196.57856 94585.18 0.10195 4.0768E-05 0.48277 0.00019304 0.58473 0.00023381 399.86691645399 402.538400800839 21.618 0.63376 21.618 21.389 22.023 0 208 37 9 0 0 0 7.6886E-05 2 7794 79.974 73.276 1 0.85898 0.96894 0 111500000 55759000 55744000 34049 256 12898 13256 53107;53108 53108 TENNDHINLK 10 1 0 Unmodified _TENNDHINLK_ 0 0 0 A0A024R8S3;P61956 A0A024R8S3 A0A024R8S3 SUMO2 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.3041 2 599.296559 1196.57856 78020.28 0.77276 0.00046311 -0.038144 -2.286E-05 0.73462 0.00044025 599.296576520781 603.30351875309 21.571 0.47171 21.571 21.422 21.893 0 118 27 6 0 0 0 3.2091E-66 2 7821 225.68 203.04 1 0.80761 0.90975 0 115940000 59685000 56258000 34050 256 12898 13256 53109;53110 53109 TENNDHINLK 10 1 0 Unmodified _TENNDHINLK_ 0 0 0 A0A024R8S3;P61956 A0A024R8S3 A0A024R8S3 SUMO2 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 399.8665 3 399.866798 1196.57856 95184.36 -0.070406 -2.8153E-05 0.0064651 2.5852E-06 -0.063941 -2.5568E-05 399.866858872161 402.538146237618 21.415 0.70294 21.415 21.269 21.972 0 134 32 10 0 0 0 2.9388E-06 2 7512 91.584 82.883 1 0.82807 0.96195 0 229120000 123800000 105320000 34051 256 12898 13256 53111;53112 53111 TENNDHINLK 10 1 0 Unmodified _TENNDHINLK_ 0 0 0 A0A024R8S3;P61956 A0A024R8S3 A0A024R8S3 SUMO2 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 402.5383 3 399.866798 1196.57856 92681.59 -0.035388 -1.415E-05 -0.050685 -2.0267E-05 -0.086073 -3.4418E-05 399.866765208362 402.538142910008 23.355 0.66002 23.355 23.124 23.784 0 185 32 9 0 0 0 0.024597 1 7844 26.012 22.249 1 1.7262 1.4004 0 26120000 10003000 16117000 34052 256 12898 13256 53113 53113 TENNDHINLK 10 1 0 Unmodified _TENNDHINLK_ 0 0 0 A0A024R8S3;P61956 A0A024R8S3 A0A024R8S3 SUMO2 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.3039 2 599.296559 1196.57856 NaN NaN NaN -0.68702 -0.00041173 NaN NaN NaN NaN 23.231 0.39914 23.231 23.04 23.44 -1.9073E-06 0 0 0 3.6664E-51 1 7277 182.92 129.17 1 NaN NaN 0 13111000 0 13111000 34053 256 12898 13256 53114 53114 TENPLILIDEVDK 13 1 0 Unmodified _TENPLILIDEVDK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.4114 2 749.903596 1497.79264 70694.3 1.2407 0.0009304 -0.10407 -7.8042E-05 1.1366 0.00085235 749.903577836071 753.910630010052 118.49 0.66151 118.49 118.23 118.9 0 111 38 4 0 0 0 0.0002185 1 76132 69.602 69.602 1 3.3817 3.3187 0 20473000 5853100 14620000 34054 946 12899 13257 53115 53115 TENPLILIDEVDK 13 1 0 Unmodified _TENPLILIDEVDK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.9119 2 749.903596 1497.79264 71000.21 0.80279 0.00060202 0.33563 0.00025169 1.1384 0.00085371 749.903923503592 753.910890071733 117.98 0.58727 117.98 117.73 118.31 7.6294E-06 139 39 6 0 0 0 5.515E-05 3 77529 96.306 96.306 1 3.7698 4.0263 0 23116000 6904100 16212000 34055 946 12899 13257 53116;53117;53118 53116 TENPLILIDEVDK 13 1 0 Unmodified _TENPLILIDEVDK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 754.4129 2 749.903596 1497.79264 71715.1 0.74239 0.00055672 0.09993 7.4938E-05 0.84232 0.00063166 749.903474084755 753.910696599881 131.05 0.56412 131.05 130.82 131.38 0 113 24 6 0 0 0 0.0019421 1 79497 55.776 55.776 1 1.6495 1.2816 0 3604500 1481700 2122900 34056 946 12899 13257 53119 53119 TENPLILIDEVDK 13 1 0 Unmodified _TENPLILIDEVDK_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.91 2 749.903596 1497.79264 71376.58 0.85916 0.00064429 0.39943 0.00029953 1.2586 0.00094382 749.903621388919 753.910681488571 130.86 0.63995 130.86 130.58 131.22 0 110 28 7 0 0 0 0.0020216 1 78441 55.452 55.452 1 1.8662 1.4679 0 3274600 1212000 2062600 34057 946 12899 13257 53120 53120 TENSLANENQQPIK 14 1 0 Unmodified _TENSLANENQQPIK_ 0 0 0 A0A0C4DGG3;B7ZB05;B4DSN4;Q8NHM5 A0A0C4DGG3 A0A0C4DGG3 KDM2B Lysine-specific demethylase 2B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 797.9047 2 793.394458 1584.77436 70157.16 0.42934 0.00034063 -0.063013 -4.9994E-05 0.36632 0.00029064 793.394797998969 797.401143757027 39.26 0.28281 39.26 39.101 39.384 -3.8147E-06 62 21 5 0 0 0 0.0094553 2 17414 36.982 36.982 1 0.95629 0.79967 0 1525400 676840 848530 34058 513 12900 13258 53121;53122 53122 TEPATGFIDGDLIESFLDISRPK 23 1 1 Unmodified _TEPATGFIDGDLIESFLDISRPK_ 0 0 1 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.4338 3 841.098871 2520.27478 66447.95 0.6502 0.00054689 0.19256 0.00016196 0.84276 0.00070885 841.433220638556 847.440882581713 133.52 0.25275 133.52 133.39 133.64 0 26 5 9 0 0 0 7.0151E-23 1 87496 118.22 118.22 1 0.7079 0.85615 0 201680000 107850000 93833000 34059 1770 12901 13259 53123 53123 TEPATGFIDGDLIESFLDISRPK 23 1 1 Unmodified _TEPATGFIDGDLIESFLDISRPK_ 0 0 1 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 841.4342 3 841.098871 2520.27478 66177.85 0.66648 0.00056058 0.49219 0.00041398 1.1587 0.00097455 841.433680419321 847.441086595006 133.5 0.3614 133.5 133.34 133.7 0 30 7 10 0 0 0 6.628E-30 2 89715 128.12 128.12 1 0.6984 0.82829 0 274140000 143280000 130860000 34060 1770 12901 13259 53124;53125 53124 TEPEEVSIEDSAQSDLK 17 1 0 Unmodified _TEPEEVSIEDSAQSDLK_ 0 0 0 D3DUZ3;Q16666;A0A0A0MRB1 D3DUZ3 D3DUZ3 IFI16 Gamma-interferon-inducible protein 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 939.4389 2 938.93655 1875.85855 NaN NaN NaN -0.63266 -0.00059402 NaN NaN NaN NaN 71.556 0.48495 71.556 71.301 71.786 0 0 0 0 0.00079329 1 41637 83.204 70.643 1 NaN NaN 0 6100700 6100700 0 34061 1196 12902 13260 53126 53126 TEPEEVSIEDSAQSDLK 17 1 0 Unmodified _TEPEEVSIEDSAQSDLK_ 0 0 0 D3DUZ3;Q16666;A0A0A0MRB1 D3DUZ3 D3DUZ3 IFI16 Gamma-interferon-inducible protein 16 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.941 2 938.93655 1875.85855 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.583 1 71.583 71.083 72.083 0 0 0 0 0.041831 1 41789 39.006 33.399 1 34062 1196 12902 13260 53127 53127 TEPEEVSIEDSAQSDLK 17 1 0 Unmodified _TEPEEVSIEDSAQSDLK_ 0 0 0 D3DUZ3;Q16666;A0A0A0MRB1 D3DUZ3 D3DUZ3 IFI16 Gamma-interferon-inducible protein 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 938.9379 2 938.93655 1875.85855 NaN NaN NaN -0.68336 -0.00064163 NaN NaN NaN NaN 70.505 0.4463 70.505 70.279 70.725 0 0 0 0 0.0066741 2 42035 62.891 52.281 1 NaN NaN 0 7996000 7996000 0 34063 1196 12902 13260 53128;53129 53129 TEPEEVSIEDSAQSDLK 17 1 0 Unmodified _TEPEEVSIEDSAQSDLK_ 0 0 0 D3DUZ3;Q16666;A0A0A0MRB1 D3DUZ3 D3DUZ3 IFI16 Gamma-interferon-inducible protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 942.9438 2 938.93655 1875.85855 61996.36 0.52219 0.00049031 0.1308 0.00012282 0.653 0.00061312 939.438019719414 942.943681084094 82.484 0.60115 82.484 82.172 82.773 0 203 36 8 0 0 0 0.011082 1 44768 31.071 31.071 1 1.2711 1.0185 0 8412400 3662800 4749600 34064 1196 12902 13260 53130 53130 TEQCLVALLHK 11 1 0 Unmodified _TEQCLVALLHK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.5792 3 437.907829 1310.70166 NaN NaN NaN 0.20683 9.057E-05 NaN NaN NaN NaN 76.235 0.92039 76.235 75.676 76.596 0 0 0 0 0.01543 1 44674 43.897 37.008 1 NaN NaN 0 21833000 0 21833000 34065 2103 12903 13261 53131 53131 TEQCLVALLHK 11 1 0 Unmodified _TEQCLVALLHK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.5794 3 437.907829 1310.70166 NaN NaN NaN -0.10828 -4.7419E-05 NaN NaN NaN NaN 74.587 1.1564 74.587 74.2 75.357 0 0 0 0 0.016367 1 44718 42.976 37.878 1 NaN NaN 0 48933000 0 48933000 34066 2103 12903 13261 53132 53132 TEQEEDEELLTESSK 15 1 0 Unmodified _TEQEEDEELLTESSK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 887.903 2 883.894351 1765.77415 64532.55 0.41673 0.00036834 0.11836 0.00010462 0.53509 0.00047296 883.894412859001 887.901599513993 54.912 0.73634 54.912 54.673 55.41 0 367 71 8 0 0 0 7.9436E-23 3 30785 149.57 149.57 1 2.7626 3.129 0 90441000 25720000 64721000 34067 1391 12904 13262 53133;53134;53135 53133 TEQEEDEELLTESSK 15 1 0 Unmodified _TEQEEDEELLTESSK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.8938 2 883.894351 1765.77415 64042.35 0.39397 0.00034823 -0.033197 -2.9343E-05 0.36077 0.00031888 883.894256913511 887.901433204812 54.218 0.74125 54.218 53.87 54.612 0 405 65 9 0 0 0 2.1598E-47 2 30861 180.09 180.09 1 2.6476 2.9759 0 118400000 35304000 83099000 34068 1391 12904 13262 53136;53137 53137 TEQEEDEELLTESSK 15 1 0 Unmodified _TEQEEDEELLTESSK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 887.9047 2 883.894351 1765.77415 64949.24 0.4627 0.00040898 0.027176 2.402E-05 0.48988 0.000433 883.894376687945 887.901490542747 64.75 1.3687 64.75 64.304 65.673 0 395 99 9 0 0 0 0.0016383 2 33195 47.189 47.189 1 5.581 4.7173 0 57726000 9848400 47878000 34069 1391 12904 13262 53138;53139 53138 TEQEEDEELLTESSK 15 1 0 Unmodified _TEQEEDEELLTESSK_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q4W5G3 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 888.4028 2 883.894351 1765.77415 65246.27 0.051913 4.5886E-05 0.43973 0.00038867 0.49164 0.00043456 883.8948192799 887.90183959046 65.374 1.2519 65.374 65.064 66.316 0 426 92 9 0 0 0 0.004715 3 33343 38.445 38.445 1 5.5233 4.6715 0 58817000 9333800 49483000 34070 1391 12904 13262 53140;53141;53142 53142 TEQEVVEGMDISTR 14 0 1 Oxidation (M) _TEQEVVEGM(ox)DISTR_ TEQEVVEGM(1)DISTR TEQEVVEGM(61.24)DISTR 0 1 0 A0A087WVZ6;A6H8Y8;Q2HXV5;Q569J9 A0A087WVZ6 A0A087WVZ6 ZMYND8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.3773 2 805.372334 1608.73012 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.301 1 43.301 42.801 43.801 3.8147E-06 0 0 0 0.0012062 1 23154 61.235 38.549 1 34071 422 12905 13263 53143 53143 310 TEQEVVEGMDISTR 14 0 1 Oxidation (M) _TEQEVVEGM(ox)DISTR_ TEQEVVEGM(1)DISTR TEQEVVEGM(49.08)DISTR 0 1 0 A0A087WVZ6;A6H8Y8;Q2HXV5;Q569J9 A0A087WVZ6 A0A087WVZ6 ZMYND8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.3751 2 805.372334 1608.73012 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.893 1 43.893 43.393 44.393 0 0 0 0 0.0059826 1 23516 49.081 39.393 1 34072 422 12905 13263 53144 53144 310 TEQEVVEGMDISTR 14 0 1 Oxidation (M) _TEQEVVEGM(ox)DISTR_ TEQEVVEGM(1)DISTR TEQEVVEGM(89.3)DISTR 0 1 0 A0A087WVZ6;A6H8Y8;Q2HXV5;Q569J9 A0A087WVZ6 A0A087WVZ6 ZMYND8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.3779 2 805.372334 1608.73012 70192.88 0.7889 0.00063536 -0.088318 -7.1129E-05 0.70058 0.00056423 805.372216116231 810.376288282139 42.572 0.36267 42.572 42.391 42.753 0 75 30 4 0 0 0 3.6252E-05 1 22931 89.301 83.837 1 0.9216 0.92952 0 6153000 3288300 2864600 34073 422 12905 13263 53145 53145 310 TEQGEEEEEEEDEEEEEK 18 1 0 Unmodified _TEQGEEEEEEEDEEEEEK_ 0 0 0 A0A0S2Z4W4;Q7Z3D7;A0A0A0MR66;P98175 A0A0S2Z4W4 A0A0S2Z4W4 DKFZp686E2459;RBM10 RNA-binding protein 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1117.4209 2 1113.41423 2224.8139 NaN NaN NaN 0.23029 0.00025641 NaN NaN NaN NaN 21.753 0.22321 21.753 21.643 21.866 0 0 0 0 3.9008E-05 1 7844 67.275 67.275 1 NaN NaN 0 3091900 0 3091900 34074 464 12906 13264 53146 53146 TEQGGAHFSVSSLAEGSVTSVGSVNPAENFR 31 0 1 Unmodified _TEQGGAHFSVSSLAEGSVTSVGSVNPAENFR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1041.1644 3 1041.16555 3120.47483 59461.7 0.59326 0.00061768 0.017516 1.8237E-05 0.61078 0.00063592 1041.49991537347 1044.83588973863 107.08 1.2321 107.08 106.74 107.98 0 645 93 12 0 0 0 0.0016113 3 66408 23.776 23.776 1 0.35515 0.39956 0 95939000 69913000 26026000 34075 1476 12907 13265 53147;53148;53149 53147 TEQGGAHFSVSSLAEGSVTSVGSVNPAENFR 31 0 1 Unmodified _TEQGGAHFSVSSLAEGSVTSVGSVNPAENFR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1041.1644 3 1041.16555 3120.47483 58954.64 0.71753 0.00074707 0.0045097 4.6953E-06 0.72204 0.00075176 1041.49992468846 1044.83573564236 106.42 1.2995 106.42 106.1 107.4 0 612 94 13 0 0 0 0.00027459 2 67558 27.363 27.363 1 0.33442 0.3803 0 122880000 93578000 29306000 34076 1476 12907 13265 53150;53151 53150 TEQGGAHFSVSSLAEGSVTSVGSVNPAENFR 31 0 1 Unmodified _TEQGGAHFSVSSLAEGSVTSVGSVNPAENFR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1041.5011 3 1041.16555 3120.47483 58949.37 0.60473 0.00062962 -0.055222 -5.7495E-05 0.54951 0.00057213 1041.49993997554 1044.83571306329 117.86 1.1693 117.86 117.63 118.8 0 381 52 16 0 0 0 8.4468E-31 3 69422 93.043 93.043 1 0.29513 0.25572 0 158820000 121290000 37521000 34077 1476 12907 13265 53152;53153;53154 53153 TEQGGAHFSVSSLAEGSVTSVGSVNPAENFR 31 0 1 Unmodified _TEQGGAHFSVSSLAEGSVTSVGSVNPAENFR_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1041.5029 3 1041.16555 3120.47483 59030.22 0.263 0.00027383 0.31528 0.00032826 0.57828 0.00060209 1041.50027593098 1044.8363053397 117.71 0.99791 117.71 117.46 118.46 -7.6294E-06 374 46 15 0 0 0 1.4557E-07 2 68358 38.32 38.32 1 0.302 0.26374 0 171300000 133130000 38171000 34078 1476 12907 13265 53155;53156 53155 TEQLGLTR 8 0 1 Unmodified _TEQLGLTR_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.2564 2 459.256174 916.497795 88252.99 0.45852 0.00021058 0.42554 0.00019543 0.88407 0.00040601 459.256570955731 464.260113254854 36.153 0.83968 36.153 35.774 36.613 -3.8147E-06 313 80 7 0 0 0 0.0010346 2 18150 113.5 19.242 1 1.0043 1.1237 0 88453000 47317000 41135000 34079 1792 12908 13266 53157;53158 53158 TEQLGLTR 8 0 1 Unmodified _TEQLGLTR_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2614 2 459.256174 916.497795 89149.66 0.99165 0.00045542 0.62631 0.00028764 1.618 0.00074306 459.256670612657 464.26023114914 35.23 0.7171 35.23 35.018 35.735 0 239 65 6 0 0 0 0.0012048 2 17890 111.17 18.214 1 1.0358 1.1825 0 146120000 62383000 83738000 34080 1792 12908 13266 53159;53160 53159 TEQLGLTR 8 0 1 Unmodified _TEQLGLTR_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.2607 2 459.256174 916.497795 88251.67 0.1421 6.5262E-05 0.33671 0.00015464 0.47882 0.0002199 459.256445229601 464.260248607177 40.884 0.76113 40.884 40.545 41.306 0 290 61 7 0 0 0 0.0075918 2 18846 82.279 7.1695 1 1.2794 1.0489 0 16815000 7639400 9176000 34081 1792 12908 13266 53161;53162 53162 TEQLGLTR 8 0 1 Unmodified _TEQLGLTR_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 459.2495 2 459.256174 916.497795 87487.22 -0.15532 -7.1331E-05 0.55323 0.00025407 0.39791 0.00018274 459.256569038621 464.260328481776 40.973 0.97916 40.973 40.481 41.461 0 335 78 7 0 0 0 0.010755 3 18298 71.501 15.825 1 1.2544 1.0261 0 13216000 5610600 7605500 34082 1792 12908 13266 53163;53164;53165 53165 TERPSGPGGEMGVCEK 16 1 1 Oxidation (M) _TERPSGPGGEM(ox)GVCEK_ TERPSGPGGEM(1)GVCEK TERPSGPGGEM(45.14)GVCEK 0 1 1 P14373;Q59EC6;A0A0G2JIZ4 P14373 P14373 TRIM27 Zinc finger protein RFP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.9217 3 569.587266 1705.73997 86200.51 0.33877 0.00019296 1.4891 0.00084818 1.8279 0.0010411 569.586951696609 575.93036021586 18.172 0.19431 18.172 18.07 18.264 0 38 12 4 0 0 0 0.00036347 1 4924 45.14 40.338 1 1.3113 1.4425 0 4218200 1328600 2889600 34083 1480 12909 13267 53166 53166 1237 TESPATAAETASEELDNR 18 0 1 Unmodified _TESPATAAETASEELDNR_ 0 0 0 Q9NTJ3;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 946.4288 2 946.429423 1890.84429 62541.58 0.64453 0.00061 -0.15503 -0.00014673 0.4895 0.00046327 946.429199378441 951.934925484965 75.786 0.72388 75.786 75.418 76.142 0 387 61 8 0 0 0 1.2526E-50 2 44421 166.62 166.62 1 0.96516 1.0744 0 79054000 40973000 38081000 34084 2070;1136 12910 13268 53167;53168 53168 TESPATAAETASEELDNR 18 0 1 Unmodified _TESPATAAETASEELDNR_ 0 0 0 Q9NTJ3;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 946.4293 2 946.429423 1890.84429 62609.7 0.4142 0.00039201 -0.13442 -0.00012722 0.27978 0.00026479 946.429181778455 951.433541028546 74.796 0.83202 74.796 74.471 75.303 0 450 73 8 0 0 0 7.6925E-30 1 44890 141.54 141.54 1 0.9983 1.1481 0 75923000 41908000 34015000 34085 2070;1136 12910 13268 53169 53169 TESPATAAETASEELDNR 18 0 1 Unmodified _TESPATAAETASEELDNR_ 0 0 0 Q9NTJ3;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 951.4347 2 946.429423 1890.84429 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.499 1 74.499 73.999 74.999 0 0 0 0 2.4013E-05 1 44833 73.386 66.184 1 34086 2070;1136 12910 13268 53170 53170 TESPATAAETASEELDNR 18 0 1 Unmodified _TESPATAAETASEELDNR_ 0 0 0 Q9NTJ3;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 946.9316 2 946.429423 1890.84429 62510.55 0.47635 0.00045083 -0.11742 -0.00011113 0.35892 0.0003397 946.429194348715 951.433426095688 87.766 1.1067 87.766 87.23 88.337 0 444 67 10 0 0 0 0.00092318 1 48136 39.163 39.163 1 2.2912 1.9367 0 30200000 9602900 20598000 34087 2070;1136 12910 13268 53171 53171 TESPATAAETASEELDNR 18 0 1 Unmodified _TESPATAAETASEELDNR_ 0 0 0 Q9NTJ3;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3;C9JJ64 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 946.9315 2 946.429423 1890.84429 62187.55 0.44916 0.0004251 -0.13453 -0.00012732 0.31463 0.00029778 946.429129543228 951.433456271571 87.934 1.1015 87.934 87.416 88.518 0 424 63 10 0 0 0 0.0002418 2 47441 47.532 47.532 1 2.3564 2.0554 0 34351000 10649000 23701000 34088 2070;1136 12910 13268 53172;53173 53173 TESSSAQQVAVSR 13 0 1 Unmodified _TESSSAQQVAVSR_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.3403 2 675.336412 1348.65827 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.525 1 21.525 21.025 22.025 0 0 0 0 0.0081803 1 7654 55.452 35.123 1 34089 367 12911 13269 53174 53174 TETNVYFK 8 1 0 Unmodified _TETNVYFK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.257 2 501.250557 1000.48656 86550.65 0.55999 0.0002807 -0.031812 -1.5946E-05 0.52818 0.00026475 501.250387496753 505.257447338524 41.528 0.76758 41.528 41.32 42.088 0 282 63 7 0 0 0 0.0086589 2 21954 77.674 65.905 1 0.8722 0.9874 0 100640000 58484000 42152000 34090 493 12912 13270 53175;53176 53176 TETNVYFK 8 1 0 Unmodified _TETNVYFK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.2575 2 501.250557 1000.48656 81925.65 0.48277 0.00024199 0.2046 0.00010255 0.68737 0.00034454 501.250744834961 505.257439812031 40.372 0.58483 40.372 40.198 40.783 0 172 46 8 0 0 0 0.0086589 2 21514 77.674 66.801 1 0.94337 1.1 0 258590000 127520000 131070000 34091 493 12912 13270 53177;53178 53178 TETNVYFK 8 1 0 Unmodified _TETNVYFK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.2507 2 501.250557 1000.48656 84324.32 0.087211 4.3715E-05 0.22528 0.00011292 0.31249 0.00015664 501.25073389558 505.257650588163 47.411 0.76857 47.411 47.194 47.963 0 247 54 9 0 0 0 0.0049843 2 22945 91.9 71.557 1 1.3058 1.0625 0 30433000 12849000 17585000 34092 493 12912 13270 53179;53180 53180 TETNVYFK 8 1 0 Unmodified _TETNVYFK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3;C9JHF7 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.2569 2 501.250557 1000.48656 86485.84 -0.11915 -5.9723E-05 0.20222 0.00010136 0.083075 4.1641E-05 501.250735046532 505.257593891459 47.375 0.57592 47.375 47.138 47.714 0 223 43 7 0 0 0 0.011407 2 22327 69.998 55.841 1 1.36 1.093 0 22421000 10433000 11988000 34093 493 12912 13270 53181;53182 53181 TETSETEITTTEIIK 15 1 0 Unmodified _TETSETEITTTEIIK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.4378 2 848.430372 1694.84619 NaN NaN NaN 0.63847 0.00054169 NaN NaN NaN NaN 77.995 0.63444 77.995 77.773 78.407 0 0 0 0 5.0258E-23 1 46123 137.16 113.55 1 NaN NaN 0 11351000 0 11351000 34094 1224 12913 13271 53183 53183 TETSETEITTTEIIK 15 1 0 Unmodified _TETSETEITTTEIIK_ 0 0 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 852.4377 2 848.430372 1694.84619 66038.7 0.40175 0.00034086 0.17095 0.00014504 0.5727 0.0004859 848.43041991256 852.437232463789 89.656 0.92822 89.656 89.004 89.932 0 208 57 8 0 0 0 3.784E-07 2 48718 130.56 130.56 1 1.5055 1.2253 0 7198400 2634700 4563700 34095 1224 12913 13271 53184;53185 53184 TETVTSFR 8 0 1 Unmodified _TETVTSFR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.7453 2 470.740357 939.46616 89330.86 0.13529 6.3687E-05 0.020634 9.7132E-06 0.15593 7.3401E-05 470.74025309543 475.74447333003 34.527 0.87868 34.527 34.149 35.027 0 257 75 6 0 0 0 0.0012436 2 17292 110.81 72.674 1 0.74404 0.78888 0 41775000 25050000 16725000 34096 1665 12914 13272 53186;53187 53187 TETVTSFR 8 0 1 Unmodified _TETVTSFR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.7446 2 470.740357 939.46616 89096.21 0.14957 7.0408E-05 0.11519 5.4224E-05 0.26476 0.00012463 470.740230924204 475.744526468742 33.919 0.71931 33.919 33.604 34.323 0 216 54 5 0 0 0 0.011008 2 17224 70.919 43.394 1 0.70264 0.77249 0 40694000 22758000 17937000 34097 1665 12914 13272 53188;53189 53189 TETVVDDWDEEFDR 14 0 1 Unmodified _TETVVDDWDEEFDR_ 0 0 0 A0A024R8V6;Q9P275;B3KMW2;K7EIH0;K7EKN3;K7EKL7 A0A024R8V6 A0A024R8V6 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 883.8766 2 878.370846 1754.72714 67280.68 0.68306 0.00059998 0.42803 0.00037597 1.1111 0.00097595 878.872963349951 883.375154928316 110.31 0.37419 110.31 110.12 110.49 7.6294E-06 57 19 4 0 0 0 0.055163 1 63621 24.229 22.718 1 1.4132 1.2245 0 2530200 1386900 1143300 34098 260 12915 13273 53190 53190 TETYPQGQPVK 11 1 0 Unmodified _TETYPQGQPVK_ 0 0 0 B3KPM8;Q8N5C6 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.3178 2 624.31696 1246.61937 77930.65 0.3802 0.00023737 0.43481 0.00027146 0.81502 0.00050883 624.818520860343 628.324212090467 25.673 0.27685 25.673 25.543 25.82 0 38 15 4 0 0 0 0.0011873 1 11265 69.423 69.423 1 0.82092 0.84211 0 4282600 1896300 2386300 34099 921 12916 13274 53191 53191 TETYPQGQPVK 11 1 0 Unmodified _TETYPQGQPVK_ 0 0 0 B3KPM8;Q8N5C6 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.3237 2 624.31696 1246.61937 79080.81 0.41599 0.00025971 -0.25716 -0.00016055 0.15883 9.9163E-05 624.316675278644 628.323850555744 29.076 0.33209 29.076 28.905 29.237 -1.9073E-06 78 27 4 0 0 0 0.0069453 1 11736 53.493 48.881 1 1.9951 1.6784 0 2143200 706650 1436500 34100 921 12916 13274 53192 53192 TEVETFVSLVR 11 0 1 Unmodified _TEVETFVSLVR_ 0 0 0 Q59ES2;Q14573;A6H8K3 Q59ES2 Q59ES2 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.3535 2 640.34826 1278.68197 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.23 1 104.23 103.73 104.73 0 0 0 0 0.00043973 1 66013 76.465 48.723 1 34101 1735 12917 13275 53193 53193 TEVIPPLIENR 11 0 1 Unmodified _TEVIPPLIENR_ 0 0 0 E1A689;C0JYY2;P04114;A8K479 E1A689 E1A689 APOB Apolipoprotein B-100;Apolipoprotein B-48 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.8635 2 640.864077 1279.7136 NaN NaN NaN -0.94178 -0.00060355 NaN NaN NaN NaN 92.589 0.53893 92.589 92.358 92.897 0 0 0 0 0.01936 1 57364 53.327 24.631 1 NaN NaN 0 22060000 22060000 0 34102 1123 12918 13276 53194 53194 TEVIQLEDTLAQVR 14 0 1 Unmodified _TEVIQLEDTLAQVR_ 0 0 0 B4DMM1;A0A0S2Z4Z2;H3BP71;A8K6K1;A0A0S2Z537;A0A024QZG0;O75150;A0PJJ6;Q05DC0;Q5VTR2 B4DMM1 B4DMM1 RNF40;RNF20 E3 ubiquitin-protein ligase BRE1B;E3 ubiquitin-protein ligase BRE1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.9435 2 807.938502 1613.86245 70679.66 0.69747 0.00056352 0.62713 0.00050668 1.3246 0.0010702 807.939682384838 812.942732781422 107.64 0.31647 107.64 107.52 107.84 0 51 22 4 0 0 0 0.00019732 1 68770 69.721 61.834 1 1.1254 1.1376 0 9791600 3807100 5984600 34103 21 12919 13277 53195 53195 TEVNGFDPLFNAITGLNGSGK 21 1 0 Unmodified _TEVNGFDPLFNAITGLNGSGK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1080.0464 2 1076.03948 2150.0644 58905.57 0.11915 0.00012821 0.62043 0.00066761 0.73958 0.00079582 1076.54157679489 1080.04709552378 128.57 0.43961 128.57 128.35 128.79 0 225 28 10 0 0 0 1.1974E-08 2 83750 98.439 98.439 1 0.8691 0.97431 0 65198000 34260000 30937000 34104 69 12920 13278 53196;53197 53197 TEVNGFDPLFNAITGLNGSGK 21 1 0 Unmodified _TEVNGFDPLFNAITGLNGSGK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1076.5372 2 1076.03948 2150.0644 58057.37 0.50707 0.00054563 0.12899 0.0001388 0.63607 0.00068443 1076.03967520932 1080.54806702387 128.23 0.41914 128.23 128.01 128.43 0 181 26 10 0 0 0 5.2174E-11 2 85600 92.063 92.063 1 0.84733 0.94971 0 79996000 44318000 35678000 34105 69 12920 13278 53198;53199 53199 TEVSLTLTNK 10 1 0 Unmodified _TEVSLTLTNK_ 0 0 0 A4QPB0;A0A024RC65;P46940;H0YLE8;B4E2M0 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.3096 2 553.308603 1104.60265 NaN NaN NaN -0.23962 -0.00013259 NaN NaN NaN NaN 60.554 0.27966 60.554 60.41 60.69 0 0 0 0 0.0024035 1 34537 80.688 54.304 1 NaN NaN 0 5831100 5831100 0 34106 352 12921 13279 53200 53200 TEVSLTLTNK 10 1 0 Unmodified _TEVSLTLTNK_ 0 0 0 A4QPB0;A0A024RC65;P46940;H0YLE8;B4E2M0 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.3089 2 553.308603 1104.60265 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.272 1 59.272 58.772 59.772 -3.8147E-06 0 0 0 0.018267 1 34490 54.539 29.617 1 34107 352 12921 13279 53201 53201 TEVWGLVLLSEEK 13 1 0 Unmodified _TEVWGLVLLSEEK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.4108 2 751.908682 1501.80281 71983.59 0.70426 0.00052954 0.33011 0.00024821 1.0344 0.00077775 751.90854588018 755.916160597699 122.08 0.67453 122.08 121.77 122.44 0 235 46 8 0 0 0 9.4817E-06 2 78899 100.72 100.72 1 0.78158 0.81175 0 14843000 8285200 6558200 34108 1827 12922 13280 53202;53203 53203 TEVWGLVLLSEEK 13 1 0 Unmodified _TEVWGLVLLSEEK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.4108 2 751.908682 1501.80281 72081.13 0.74197 0.0005579 0.21692 0.0001631 0.95889 0.000721 752.41006047385 755.915965555324 121.55 0.75332 121.55 121.24 121.99 -7.6294E-06 305 54 8 0 0 0 0.00018657 2 80423 71.153 61.466 1 0.87516 0.89439 0 17325000 9552200 7772600 34109 1827 12922 13280 53204;53205 53205 TEVWGLVLLSEEK 13 1 0 Unmodified _TEVWGLVLLSEEK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 755.9163 2 751.908682 1501.80281 71525.98 1.3223 0.00099426 -0.062012 -4.6627E-05 1.2603 0.00094763 751.908723590451 755.915572036748 134.29 0.26607 134.29 134.14 134.41 1.5259E-05 80 12 9 0 0 0 9.3148E-07 2 81896 111.52 94.893 1 1.3994 1.0841 0 13330000 5847300 7482800 34110 1827 12922 13280 53206;53207 53206 TEVWGLVLLSEEK 13 1 0 Unmodified _TEVWGLVLLSEEK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.9089 2 751.908682 1501.80281 70177.26 1.1208 0.00084274 -0.080975 -6.0886E-05 1.0398 0.00078185 752.410082936456 755.91560143535 134.13 0.39368 134.13 133.92 134.32 0 114 21 8 0 0 0 3.4264E-06 2 80855 108.37 98.685 1 1.187 0.97674 0 12191000 5922400 6268700 34111 1827 12922 13280 53208;53209 53209 TEWETAAPAVAETPDIK 17 1 0 Acetyl (Protein N-term) _(ac)TEWETAAPAVAETPDIK_ 1 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 936.4583 2 935.957088 1869.89962 64809.62 0.70785 0.00066252 -0.49625 -0.00046446 0.2116 0.00019805 936.45816667016 940.465171876255 112.94 0.57828 112.94 112.7 113.28 0 153 38 7 0 0 0 0.00023071 4 73153 64.65 64.65 1 1.6061 1.6032 0 14390000 6323400 8066500 34112 160 12923 13281 53210;53211;53212;53213 53213 TEWETAAPAVAETPDIK 17 1 0 Acetyl (Protein N-term) _(ac)TEWETAAPAVAETPDIK_ 1 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 936.4588 2 935.957088 1869.89962 64215.75 0.75378 0.00070551 0.14525 0.00013595 0.89904 0.00084146 935.957419645661 939.964145499273 124.63 0.55829 124.63 124.37 124.92 0 126 24 8 0 0 0 0.0017531 1 74761 43.594 43.594 1 1.3519 1.0661 0 5505000 2318300 3186800 34113 160 12923 13281 53214 53214 TEYDAVAEK 9 1 0 Unmodified _TEYDAVAEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.2429 2 513.242929 1024.47131 NaN NaN NaN 0.27316 0.00014019 NaN NaN NaN NaN 25.111 0.5023 25.111 24.931 25.433 0 0 0 0 0.0013427 1 10686 86.67 51.469 1 NaN NaN 0 61702000 61702000 0 34114 2070 12924 13282 53215 53215 TEYDAVAEK 9 1 0 Unmodified _TEYDAVAEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 513.243 2 513.242929 1024.47131 NaN NaN NaN 0.40484 0.00020778 NaN NaN NaN NaN 24.923 0.37128 24.923 24.756 25.128 0 0 0 0 0.0046039 1 10549 76.064 48.539 1 NaN NaN 0 14799000 14799000 0 34115 2070 12924 13282 53216 53216 TEYDAVAEK 9 1 0 Unmodified _TEYDAVAEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.2499 2 513.242929 1024.47131 84157.82 0.40843 0.00020962 -0.27443 -0.00014085 0.134 6.8774E-05 513.242755327014 517.249826566961 28.021 0.80764 28.021 27.785 28.593 1.9073E-06 184 39 8 0 0 0 0.015205 2 11060 54.982 36.946 1 1.764 1.3979 0 18663000 6840200 11823000 34116 2070 12924 13282 53217;53218 53217 TEYEEAQDAIVK 12 1 0 Unmodified _TEYEEAQDAIVK_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;B4DL39;B4DSB9;B4DN49 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3431 2 698.335546 1394.65654 73893.98 0.46998 0.0003282 -0.10004 -6.9858E-05 0.36994 0.00025834 698.335574817724 702.342312951271 52.411 0.75542 52.411 51.982 52.737 0 195 56 6 0 0 0 0.00041352 1 29295 71.349 71.349 1 0.48667 0.52365 0 33116000 20313000 12802000 34117 1237 12925 13283 53219 53219 TEYEEAQDAIVK 12 1 0 Unmodified _TEYEEAQDAIVK_ 0 0 0 V9H019;Q53GS1;Q53FK0;E9PHA6;P43246;Q53RU4;B4DL39;B4DSB9;B4DN49 V9H019 V9H019 MSH2 DNA mismatch repair protein Msh2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.3436 2 698.335546 1394.65654 NaN NaN NaN -0.56781 -0.00039652 NaN NaN NaN NaN 51.238 0.38304 51.238 50.97 51.353 3.8147E-06 0 0 0 0.0022766 1 29091 68.49 34.104 1 NaN NaN 0 5774900 0 5774900 34118 1237 12925 13283 53220 53220 TEYISTEFNR 10 0 1 Unmodified _TEYISTEFNR_ 0 0 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3035 2 630.298767 1258.58298 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.41 1 60.41 59.91 60.91 0 0 0 0 0.00031057 1 34476 76.465 57.15 1 34119 46 12926 13284 53221 53221 TEYISTEFNR 10 0 1 Unmodified _TEYISTEFNR_ 0 0 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3022 2 630.298767 1258.58298 NaN NaN NaN -0.43092 -0.00027161 NaN NaN NaN NaN 59.489 0.69177 59.489 59.073 59.765 0 0 0 0 0.0024994 1 34458 80.239 59.337 1 NaN NaN 0 11050000 0 11050000 34120 46 12926 13284 53222 53222 TEYISTEFNR 10 0 1 Unmodified _TEYISTEFNR_ 0 0 0 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.301 2 630.298767 1258.58298 NaN NaN NaN -0.58416 -0.00036819 NaN NaN NaN NaN 69.628 0.19818 69.628 69.468 69.666 0 0 0 0 0.051194 1 36519 46.462 30.259 1 NaN NaN 0 1022500 0 1022500 34121 46 12926 13284 53223 53223 TEYLSNADER 10 0 1 Unmodified _TEYLSNADER_ 0 0 0 Q14204;H0YJ21 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.2767 2 599.272749 1196.53095 78148.63 0.81772 0.00049004 0.13754 8.2424E-05 0.95526 0.00057246 599.773651845764 604.277159299562 28.84 0.26387 28.84 28.719 28.983 1.9073E-06 54 13 6 0 0 0 0.0034875 1 13783 64.297 57.402 1 1.6997 1.7807 0 12492000 4434800 8057600 34122 1729 12927 13285 53224 53224 TFAAQSLVQLLSK 13 1 0 Unmodified _TFAAQSLVQLLSK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.4066 2 703.406109 1404.79767 73103.45 0.72576 0.0005105 0.049494 3.4814E-05 0.77525 0.00054532 703.405956048198 707.413267761067 122.41 0.85556 122.41 122.1 122.96 0 297 60 8 0 0 0 2.3253E-13 2 79083 128.01 112.39 1 0.87217 0.85871 0 19737000 10359000 9378400 34123 1565 12928 13286 53225;53226 53225 TFAAQSLVQLLSK 13 1 0 Unmodified _TFAAQSLVQLLSK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.4135 2 703.406109 1404.79767 72645.71 0.8071 0.00056772 0.19182 0.00013493 0.99893 0.00070265 703.406265970251 707.413123549629 121.83 0.99979 121.83 121.41 122.41 0 336 73 8 0 0 0 0.00015017 1 80557 84.479 71.863 1 0.87197 0.93684 0 22832000 11626000 11206000 34124 1565 12928 13286 53227 53227 TFAAQSLVQLLSK 13 1 0 Unmodified _TFAAQSLVQLLSK_ 0 0 0 P42695;G3V1A9;E9PKK4 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.414 2 703.406109 1404.79767 NaN NaN NaN 1.0506 0.00073897 NaN NaN NaN NaN 134.57 0.20377 134.57 134.45 134.66 0 0 0 0 0.00058888 1 82235 81.625 62.845 1 NaN NaN 0 11525000 0 11525000 34125 1565 12928 13286 53228 53228 TFADCIQALLEQHQVLEVGGNTAR 24 0 1 Unmodified _TFADCIQALLEQHQVLEVGGNTAR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 890.7852 3 890.781659 2669.32315 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.28 1 124.28 123.78 124.78 0 0 0 0 0.00022835 1 82645 56.29 48.844 1 34126 1699 12929 13287 53229 53229 TFAGNTPLHLAAGLGYPTLTR 21 0 1 Unmodified _TFAGNTPLHLAAGLGYPTLTR_ 0 0 0 Q00653;A0A1P8C958 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.0637 3 724.391772 2170.15349 NaN NaN NaN -0.24121 -0.00017473 NaN NaN NaN NaN 110.73 0.45798 110.73 110.42 110.88 0 0 0 0 0.015571 1 69632 28.393 22.683 1 NaN NaN 0 3536800 0 3536800 34127 1674 12930 13288 53230 53230 TFAGNTPLHLAAGLGYPTLTR 21 0 1 Unmodified _TFAGNTPLHLAAGLGYPTLTR_ 0 0 0 Q00653;A0A1P8C958 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.7278 3 724.391772 2170.15349 72853.34 0.80312 0.00058177 0.30961 0.00022428 1.1127 0.00080605 724.72650746346 728.062321380502 109.83 0.32458 109.83 109.6 109.93 0 62 21 5 0 0 0 2.9936E-07 1 70626 54.117 54.117 1 2.3533 2.3632 0 9232500 2839600 6392800 34128 1674 12930 13288 53231 53231 TFANSSYLAQHIR 13 0 1 Unmodified _TFANSSYLAQHIR_ 0 0 0 D3DUR9;Q8TF68;B4DQU6;F5H8L7;E9PHB3 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.26 3 503.259918 1506.75793 NaN NaN NaN -0.15046 -7.5718E-05 NaN NaN NaN NaN 61.328 0.3152 61.328 61.137 61.452 -3.8147E-06 0 0 0 0.026175 1 35043 26.627 21.548 1 NaN NaN 0 2902300 2902300 0 34129 1195 12931 13289 53232 53232 TFANSSYLAQHIR 13 0 1 Unmodified _TFANSSYLAQHIR_ 0 0 0 D3DUR9;Q8TF68;B4DQU6;F5H8L7;E9PHB3 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.2596 3 503.259918 1506.75793 NaN NaN NaN -0.35409 -0.0001782 NaN NaN NaN NaN 59.585 0.3678 59.585 59.489 59.857 -3.8147E-06 0 0 0 0.00021781 1 34751 70.089 49.426 1 NaN NaN 0 12865000 12865000 0 34130 1195 12931 13289 53233 53233 TFANSSYLAQHIR 13 0 1 Unmodified _TFANSSYLAQHIR_ 0 0 0 D3DUR9;Q8TF68;B4DQU6;F5H8L7;E9PHB3 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.5961 3 503.259918 1506.75793 87091.52 0.078082 3.9296E-05 0.1839 9.2552E-05 0.26199 0.00013185 503.594270782671 506.596132211888 71.176 0.97752 71.176 70.75 71.727 0 280 65 6 0 0 0 0.015807 1 37365 26.112 20.935 1 2.0278 1.7069 0 3069900 995400 2074500 34131 1195 12931 13289 53234 53234 TFANSSYLAQHIR 13 0 1 Unmodified _TFANSSYLAQHIR_ 0 0 0 D3DUR9;Q8TF68;B4DQU6;F5H8L7;E9PHB3 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.9308 3 503.259918 1506.75793 88704.45 -0.20569 -0.00010352 0.32511 0.00016361 0.11941 6.0097E-05 503.594412567894 506.596251805671 71.605 0.97205 71.605 71.157 72.129 0 250 62 7 0 0 0 0.024594 2 36844 19.323 18.578 1 1.8482 1.6416 0 2377500 786500 1591000 34132 1195 12931 13289 53235;53236 53235 TFANSSYLAQHIR 13 0 1 Unmodified _TFANSSYLAQHIR_ 0 0 0 D3DUR9;Q8TF68;B4DQU6;F5H8L7;E9PHB3 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.3912 2 754.386239 1506.75793 NaN NaN NaN 0.57883 0.00043666 NaN NaN NaN NaN 71.608 0.73014 71.608 71.157 71.887 0 0 0 0 0.052555 1 36773 39.785 35.089 1 NaN NaN 0 1291200 0 1291200 34133 1195 12931 13289 53237 53237 TFAPEEISAMVLTK 14 1 0 Oxidation (M) _TFAPEEISAM(ox)VLTK_ TFAPEEISAM(1)VLTK TFAPEEISAM(55.4)VLTK 0 1 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.8995 2 776.899999 1551.78545 70479.71 1.0316 0.00080148 0.012727 9.8873E-06 1.0444 0.00081137 776.899705523715 780.907578202562 101.97 0.48467 101.97 101.59 102.08 7.6294E-06 97 38 4 0 0 0 0.00058061 1 62610 55.401 55.401 1 0.896 0.90797 0 5822200 2549400 3272700 34134 1466 12932 13290 53238 53238 1179 TFAPEEISAMVLTK 14 1 0 Oxidation (M) _TFAPEEISAM(ox)VLTK_ TFAPEEISAM(1)VLTK TFAPEEISAM(45.88)VLTK 0 1 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.9009 2 776.899999 1551.78545 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.05 1 101.05 100.55 101.55 0 0 0 0 0.0077586 1 63566 45.879 27.099 1 34135 1466 12932 13290 53239 53239 1179 TFAPEEISAMVLTK 14 1 0 Oxidation (M) _TFAPEEISAM(ox)VLTK_ TFAPEEISAM(1)VLTK TFAPEEISAM(55.45)VLTK 0 1 0 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.9011 2 776.899999 1551.78545 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.15 1 101.15 100.65 101.65 -7.6294E-06 0 0 0 0.0024479 1 63642 55.452 36.672 1 34136 1466 12932 13290 53240 53240 1179 TFCQLILDPIFK 12 1 0 Unmodified _TFCQLILDPIFK_ 0 0 0 P13639;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.9122 2 747.904888 1493.79522 69964.24 1.0646 0.00079619 -0.024429 -1.8271E-05 1.0401 0.00077792 747.904849564096 751.912004701538 126.8 1.6578 126.8 126.33 127.99 -7.6294E-06 609 108 12 0 0 0 1.846E-12 4 82466 125.75 125.75 1 3.3734 3.572 0 31269000 7755100 23513000 34137 1478 12933 13291 53241;53242;53243;53244 53241 TFCQLILDPIFK 12 1 0 Unmodified _TFCQLILDPIFK_ 0 0 0 P13639;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.913 2 747.904888 1493.79522 NaN NaN NaN 0.15339 0.00011472 NaN NaN NaN NaN 126.44 1.4119 126.44 126.06 127.47 0 0 0 0 9.7487E-20 2 84191 131.09 114.86 1 NaN NaN 0 30268000 0 30268000 34138 1478 12933 13291 53245;53246 53245 TFDETVSTYVPLAQQVEDFHK 21 1 0 Unmodified _TFDETVSTYVPLAQQVEDFHK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.0674 3 818.7323 2453.17507 67312.13 0.77174 0.00063185 -0.079273 -6.4903E-05 0.69247 0.00056695 819.066612252545 821.737890443939 112.44 0.72262 112.44 112.2 112.92 7.6294E-06 356 53 9 0 0 0 3.3865E-08 1 71008 66.874 66.874 1 0.71195 0.77347 0 46833000 28406000 18427000 34139 1837 12934 13292 53247 53247 TFDETVSTYVPLAQQVEDFHK 21 1 0 Unmodified _TFDETVSTYVPLAQQVEDFHK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.4055 3 818.7323 2453.17507 67333.16 1.0724 0.00087801 -0.29026 -0.00023765 0.78213 0.00064036 819.066434753605 821.737532783003 111.89 0.68378 111.89 111.59 112.27 7.6294E-06 383 50 10 0 0 0 3.9032E-06 2 72171 48.229 48.229 1 0.69769 0.774 0 48248000 28318000 19929000 34140 1837 12934 13292 53248;53249 53248 TFDETVSTYVPLAQQVEDFHK 21 1 0 Unmodified _TFDETVSTYVPLAQQVEDFHK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 821.4044 3 818.7323 2453.17507 66756.13 0.97561 0.00079876 -0.32527 -0.00026631 0.65034 0.00053245 819.066491659076 821.737628021455 123.21 1.0443 123.21 122.93 123.97 0 321 45 13 0 0 0 2.3424E-05 2 73506 40.81 40.81 1 1.3112 1.0881 0 45696000 18870000 26826000 34141 1837 12934 13292 53250;53251 53250 TFDETVSTYVPLAQQVEDFHK 21 1 0 Unmodified _TFDETVSTYVPLAQQVEDFHK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 821.7378 3 818.7323 2453.17507 66879.66 0.98192 0.00080393 -0.54464 -0.00044592 0.43728 0.00035801 819.06627350972 821.73755788288 123.07 1.1437 123.07 122.82 123.97 0 339 49 14 0 0 0 0.00055557 2 72488 33.45 33.45 1 1.3143 1.1026 0 48083000 20110000 27973000 34142 1837 12934 13292 53252;53253 53252 TFDPYIIIR 9 0 1 Unmodified _TFDPYIIIR_ 0 0 0 Q13601;B4DMS5 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.3235 2 569.318774 1136.623 81727.18 0.70686 0.00040243 0.10393 5.9169E-05 0.81079 0.0004616 569.318656960448 574.322813476512 108.1 1.1889 108.1 107.74 108.93 7.6294E-06 385 86 7 0 0 0 0.0022292 5 67325 75.109 65.122 1 1.1479 1.2398 0 48578000 22992000 25586000 34143 1717 12935 13293 53254;53255;53256;53257;53258 53255 TFDPYIIIR 9 0 1 Unmodified _TFDPYIIIR_ 0 0 0 Q13601;B4DMS5 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.3232 2 569.318774 1136.623 81176.51 0.81556 0.00046431 -0.084436 -4.8071E-05 0.73112 0.00041624 569.318569972239 574.322742010636 107.43 1.2479 107.43 106.98 108.23 0 368 86 6 0 0 0 0.0013192 3 68316 86.953 70.177 1 1.1211 1.2331 0 40796000 20037000 20759000 34144 1717 12935 13293 53259;53260;53261 53259 TFDPYIIIR 9 0 1 Unmodified _TFDPYIIIR_ 0 0 0 Q13601;B4DMS5 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.3228 2 569.318774 1136.623 80976.15 0.82515 0.00046977 0.062654 3.567E-05 0.8878 0.00050544 569.318798995062 574.322753600986 119.38 1.0707 119.38 119.09 120.16 0 224 47 8 0 0 0 0.0014644 2 70571 85.064 74.65 1 1.265 1.0544 0 10608000 4571400 6036800 34145 1717 12935 13293 53262;53263 53262 TFDPYIIIR 9 0 1 Unmodified _TFDPYIIIR_ 0 0 0 Q13601;B4DMS5 Q13601 Q13601 KRR1 KRR1 small subunit processome component homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.3188 2 569.318774 1136.623 NaN NaN NaN 0.096861 5.5145E-05 NaN NaN NaN NaN 119.22 0.88438 119.22 118.88 119.77 0 0 0 0 0.013135 1 69557 64.265 59.67 1 NaN NaN 0 5507600 5507600 0 34146 1717 12935 13293 53264 53264 TFEEILPEIIISK 13 1 0 Unmodified _TFEEILPEIIISK_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.9365 2 766.434532 1530.85451 NaN NaN NaN -0.189 -0.00014486 NaN NaN NaN NaN 125.85 0.55065 125.85 125.61 126.16 7.6294E-06 0 0 0 0.0042749 1 81875 76.143 57.397 1 NaN NaN 0 2219000 2219000 0 34147 646 12936 13294 53265 53265 TFEEILPEIIISK 13 1 0 Unmodified _TFEEILPEIIISK_ 0 0 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.4075 2 766.434532 1530.85451 76450.43 0.91426 0.00070072 0.4816 0.00036911 1.3959 0.0010698 766.93564439639 770.944063858224 125.45 0.4202 125.45 125.24 125.66 -7.6294E-06 63 29 4 0 0 0 0.044234 1 83615 60.434 57.494 1 0.53049 0.57016 0 3766600 1990100 1776500 34148 646 12936 13294 53266 53266 TFEEYLDEYYR 11 0 1 Unmodified _TFEEYLDEYYR_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;H0YH26 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.3374 2 764.335546 1526.65654 73257.83 0.77107 0.00058936 0.19214 0.00014686 0.96321 0.00073622 764.8372865762 769.339863228652 100.4 0.83546 100.4 99.982 100.82 0 155 67 5 0 0 0 0.0014602 1 61585 67.334 67.334 1 0.78872 0.79882 0 7652500 4652500 3000000 34149 1916 12937 13295 53267 53267 TFEEYLDEYYR 11 0 1 Unmodified _TFEEYLDEYYR_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;H0YH26 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.8917 2 764.335546 1526.65654 73950.85 0.7331 0.00056034 0.48596 0.00037144 1.2191 0.00093177 764.837281152356 769.339848377378 99.614 0.80432 99.614 99.304 100.11 0 195 64 4 0 0 0 0.025287 1 62565 76.943 76.943 1 0.80396 0.81007 0 10641000 6001400 4639700 34150 1916 12937 13295 53268 53268 TFEEYLDEYYR 11 0 1 Unmodified _TFEEYLDEYYR_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2;H0YH26 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.3408 2 764.335546 1526.65654 72904.64 0.94713 0.00072393 0.072881 5.5705E-05 1.02 0.00077963 764.836782546551 769.339888350719 112.76 0.5892 112.76 112.5 113.09 0 73 27 4 0 0 0 0.0073711 1 65496 52.725 52.725 1 1.1624 1.0072 0 2011500 1169500 841990 34151 1916 12937 13295 53269 53269 TFEGHDASVLK 11 1 0 Unmodified _TFEGHDASVLK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3044 2 602.303852 1202.59315 79122.68 0.6454 0.00038873 -0.03256 -1.9611E-05 0.61284 0.00036912 602.303872484397 606.310711117586 33.778 0.71462 33.778 33.414 34.128 0 292 63 6 0 0 0 1.6719E-05 3 16662 106.2 78.647 1 0.96205 1.0418 0 43646000 23554000 20092000 34152 1698 12938 13296 53270;53271;53272 53270 TFEGHDASVLK 11 1 0 Unmodified _TFEGHDASVLK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.3116 2 602.303852 1202.59315 77567.55 0.71133 0.00042844 -0.1562 -9.4079E-05 0.55513 0.00033436 602.303736411193 606.311006430507 32.725 0.53173 32.725 32.44 32.971 0 248 49 6 0 0 0 2.4004E-08 2 16200 121.6 85.047 1 0.94722 1.0623 0 54957000 25068000 29888000 34153 1698 12938 13296 53273;53274 53274 TFEGHDASVLK 11 1 0 Unmodified _TFEGHDASVLK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.311 2 602.303852 1202.59315 78528.84 0.46989 0.00028302 -0.20909 -0.00012593 0.2608 0.00015708 602.303882387151 606.310455529382 38.511 0.95349 38.511 37.921 38.874 0 383 72 10 0 0 0 2.7555E-05 2 17223 101.97 74.15 1 1.3603 1.0544 0 13626000 6173800 7451900 34154 1698 12938 13296 53275;53276 53275 TFEGHDASVLK 11 1 0 Unmodified _TFEGHDASVLK_ 0 0 0 Q12788;J3KNP2;A0JLS5 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 606.3112 2 602.303852 1202.59315 75969.63 0.3373 0.00020316 -0.46657 -0.00028101 -0.12927 -7.7859E-05 602.303844530694 606.310529960239 38.483 0.86443 38.483 37.953 38.817 -3.8147E-06 376 67 8 0 0 0 2.6881E-10 3 16790 133.75 103.43 1 1.3229 1.0715 0 13324000 6037900 7285900 34155 1698 12938 13296 53277;53278;53279 53277 TFEVPEENTAETITR 15 0 1 Unmodified _TFEVPEENTAETITR_ 0 0 0 A0A024RBU4;O96006;C9JXP4 A0A024RBU4 A0A024RBU4 hCG_1981838;ZBED1 Zinc finger BED domain-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.9212 2 868.920506 1735.82646 NaN NaN NaN -0.22711 -0.00019734 NaN NaN NaN NaN 80.633 0.48454 80.633 80.373 80.857 0 0 0 0 1.9593E-06 1 47881 92.866 86.626 1 NaN NaN 0 8052800 8052800 0 34156 347 12939 13297 53280 53280 TFFEELAVEDK 11 1 0 Unmodified _TFFEELAVEDK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8;A0PJ72;A0A0G2JIC2 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8525 2 664.32445 1326.63435 77842.43 0.94146 0.00062544 0.05834 3.8757E-05 0.9998 0.00066419 664.324850181806 668.331266172974 98.604 0.81075 98.604 98.292 99.102 -7.6294E-06 197 65 5 0 0 0 0.030939 1 60398 59.426 50.563 1 0.71372 0.76008 0 15999000 8483900 7515300 34157 1926 12940 13298 53281 53281 TFFEELAVEDK 11 1 0 Unmodified _TFFEELAVEDK_ 0 0 0 Q8NE71;Q2L6I2;B4DNU2;Q5STZ8;A0PJ72;A0A0G2JIC2 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.361 2 664.32445 1326.63435 77197.42 0.61497 0.00040854 0.46337 0.00030783 1.0783 0.00071637 664.32472773441 668.331813073155 98.012 1.085 98.012 97.458 98.543 0 230 91 5 0 0 0 0.024489 1 61248 72.006 72.006 1 0.73714 0.74308 0 13371000 7714900 5656600 34158 1926 12940 13298 53282 53282 TFFSFPAVVAPFK 13 1 0 Unmodified _TFFSFPAVVAPFK_ 0 0 0 A0A090N8G0;P41250 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.4025 2 729.395013 1456.77547 NaN NaN NaN 0.20413 0.00014889 NaN NaN NaN NaN 130.89 1.2222 130.89 130.3 131.53 0 0 0 0 0.00052011 2 85169 83 74.468 1 NaN NaN 0 6884500 0 6884500 34159 457 12941 13299 53283;53284 53283 TFFSFPAVVAPFK 13 1 0 Unmodified _TFFSFPAVVAPFK_ 0 0 0 A0A090N8G0;P41250 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.3958 2 729.395013 1456.77547 72266.27 0.90404 0.0006594 0.29472 0.00021497 1.1988 0.00087437 729.896384453744 733.402329301146 130.38 1.2824 130.38 129.83 131.11 0 345 89 7 0 0 0 0.00012464 2 87054 78.655 78.655 1 3.2089 3.3146 0 11444000 3412600 8031600 34160 457 12941 13299 53285;53286 53286 TFGTAIVINPEK 12 1 0 Unmodified _TFGTAIVINPEK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3582 2 645.358628 1288.7027 76697.87 0.88702 0.00057245 0.24615 0.00015885 1.1332 0.0007313 645.358806302825 649.365696910648 85.416 0.92616 85.416 85.097 86.023 0 347 76 7 0 0 0 2.3499E-08 3 51299 120.06 120.06 1 0.80478 0.86785 0 41498000 21255000 20243000 34161 1718 12942 13300 53287;53288;53289 53288 TFGTAIVINPEK 12 1 0 Unmodified _TFGTAIVINPEK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.3662 2 645.358628 1288.7027 76303.37 0.70453 0.00045467 0.078248 5.0498E-05 0.78278 0.00050517 645.358799440526 649.36545106352 84.595 0.94695 84.595 84.059 85.006 0 358 76 7 0 0 0 0.00014665 2 51877 93.058 86.753 1 0.75575 0.78703 0 33922000 19351000 14571000 34162 1718 12942 13300 53290;53291 53291 TFGTAIVINPEK 12 1 0 Unmodified _TFGTAIVINPEK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.3655 2 645.358628 1288.7027 76718.95 0.68673 0.00044319 -0.33796 -0.0002181 0.34878 0.00022509 645.358470116977 649.365035295449 97.857 1.4561 97.857 97.435 98.891 -7.6294E-06 377 93 7 0 0 0 0.00030735 2 55137 72.922 69.029 1 0.92792 0.73654 0 6482000 3177500 3304600 34163 1718 12942 13300 53292;53293 53293 TFGTAIVINPEK 12 1 0 Unmodified _TFGTAIVINPEK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.3593 2 645.358628 1288.7027 76976.81 0.56803 0.00036658 -0.11587 -7.4779E-05 0.45216 0.0002918 645.358657561691 649.365223998012 97.691 1.3205 97.691 97.265 98.585 0 318 77 6 0 0 0 0.00018714 2 54138 80.706 76.546 1 0.93471 0.76196 0 6572800 3485500 3087300 34164 1718 12942 13300 53294;53295 53295 TFLHTVQR 8 0 1 Unmodified _TFLHTVQR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 334.5224 3 334.522414 1000.54541 102542.3 0.10258 3.4314E-05 0.092041 3.079E-05 0.19462 6.5104E-05 334.522446732187 337.858494598762 28.813 0.53618 28.813 28.669 29.205 0 145 28 8 0 0 0 0.0023719 2 13703 73.248 49.093 1 1.0488 1.2162 0 172180000 81552000 90632000 34165 2059 12943 13301 53296;53297 53297 TFLHTVQR 8 0 1 Unmodified _TFLHTVQR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.28 2 501.279983 1000.54541 84428.05 0.45409 0.00022763 0.11342 5.6857E-05 0.56751 0.00028448 501.279980935483 506.284049987551 28.806 0.57819 28.806 28.669 29.247 1.9073E-06 138 31 8 0 0 0 5.0681E-30 2 13716 198.25 142.13 1 1.0633 1.248 0 221190000 102430000 118760000 34166 2059 12943 13301 53298;53299 53299 TFLHTVQR 8 0 1 Unmodified _TFLHTVQR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2792 2 501.279983 1000.54541 83757.27 0.19118 9.5837E-05 0.1004 5.033E-05 0.29159 0.00014617 501.279641922762 506.283857135161 27.862 0.67597 27.862 27.669 28.345 0 200 35 9 0 0 0 0.0010346 1 13017 113.5 66.432 1 0.99871 1.1459 0 183280000 86166000 97113000 34167 2059 12943 13301 53300 53300 TFLHTVQR 8 0 1 Unmodified _TFLHTVQR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 334.5222 3 334.522414 1000.54541 102401.5 0.023968 8.0177E-06 0.139 4.6497E-05 0.16296 5.4515E-05 334.522407932943 337.858465442879 27.863 0.6374 27.863 27.649 28.286 1.9073E-06 184 33 8 0 0 0 0.00056282 2 13035 108.46 80.287 1 1.0051 1.1465 0 141080000 72625000 68454000 34168 2059 12943 13301 53301;53302 53301 TFLHTVQR 8 0 1 Unmodified _TFLHTVQR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 506.2838 2 501.279983 1000.54541 84897.82 0.087523 4.3873E-05 0.056425 2.8285E-05 0.14395 7.2158E-05 501.280049871329 506.28404242366 32.375 0.84626 32.375 32.109 32.955 0 196 41 7 0 0 0 0.0015831 2 13872 107.66 56.699 1 2.0141 1.6927 0 26755000 9772900 16982000 34169 2059 12943 13301 53303;53304 53303 TFLHTVQR 8 0 1 Unmodified _TFLHTVQR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 337.8582 3 334.522414 1000.54541 101322.8 -0.29069 -9.7242E-05 0.1566 5.2385E-05 -0.13409 -4.4858E-05 334.522475598724 337.858521174465 32.389 0.74174 32.389 32.194 32.936 0 193 35 8 0 0 0 0.0081402 2 13873 49.418 33.215 1 2.0958 1.7499 0 23479000 7813700 15665000 34170 2059 12943 13301 53305;53306 53305 TFLHTVQR 8 0 1 Unmodified _TFLHTVQR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.2843 2 501.279983 1000.54541 84052.35 0.24202 0.00012132 -0.17725 -8.8853E-05 0.064768 3.2467E-05 501.279849116531 506.283942039316 32.291 1.0293 32.291 32.063 33.093 0 213 51 6 0 0 0 0.0045182 2 13339 93.374 46.307 1 2.0065 1.7314 0 22598000 7394000 15204000 34171 2059 12943 13301 53307;53308 53307 TFLHTVQR 8 0 1 Unmodified _TFLHTVQR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 334.5226 3 334.522414 1000.54541 103012.7 -0.075017 -2.5095E-05 0.06149 2.057E-05 -0.013527 -4.5251E-06 334.522410723737 337.858479630782 32.282 0.89753 32.282 32.063 32.961 0 237 43 8 0 0 0 0.024049 1 13342 30.167 22.687 1 2.0118 1.7104 0 19241000 6582400 12659000 34172 2059 12943 13301 53309 53309 TFLVGER 7 0 1 Unmodified _TFLVGER_ 0 0 0 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.2295 2 411.229428 820.444303 94010.21 -0.030699 -1.2624E-05 0.35163 0.0001446 0.32093 0.00013198 411.229594667256 416.233582347482 50.576 0.65384 50.576 50.014 50.668 3.8147E-06 234 63 5 0 0 0 0.026953 2 27938 83.614 59.642 1 1.8689 2.0344 0 51010000 17336000 33675000 34173 1522 12944 13302 53310;53311 53311 TFLVGER 7 0 1 Unmodified _TFLVGER_ 0 0 0 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.2296 2 411.229428 820.444303 93799.4 0.15259 6.2748E-05 0.1014 4.1697E-05 0.25398 0.00010445 411.229535357176 416.233457819396 49.011 0.27843 49.011 48.788 49.066 0 73 22 4 0 0 0 0.03421 1 27534 62.717 45.156 1 2.4849 2.8805 0 65968000 20218000 45749000 34174 1522 12944 13302 53312 53312 TFMEITLEEDSIER 14 0 1 Oxidation (M) _TFM(ox)EITLEEDSIER_ TFM(1)EITLEEDSIER TFM(61.24)EITLEEDSIER 0 1 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 864.9051 2 864.903467 1727.79238 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.223 1 91.223 90.723 91.723 0 0 0 0 0.0012062 1 56459 61.235 53.855 1 34175 1887 12945 13303 53313 53313 1735 TFNEPESVIAR 11 0 1 Unmodified _TFNEPESVIAR_ 0 0 0 Q9NSI6;Q5R2U7;H7C409 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.8268 2 631.822409 1261.63027 77073.21 0.54896 0.00034684 -0.34218 -0.0002162 0.20678 0.00013065 631.82250975917 636.826279688182 74.104 0.64943 74.104 73.869 74.519 0 147 46 5 0 0 0 0.032358 1 38492 37.696 33.245 1 1.6231 1.4096 0 2650900 895110 1755700 34176 2068 12946 13304 53314 53314 TFNEPGSPIVK 11 1 0 Unmodified _TFNEPGSPIVK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.8171 2 594.816596 1187.61864 78678.09 0.76979 0.00045788 0.080871 4.8103E-05 0.85066 0.00050599 594.816668058637 598.82366415014 57.212 1.4417 57.212 56.808 58.25 0 548 115 7 0 0 0 8.4085E-06 2 32161 109.44 94.924 1 0.80409 0.91116 0 91946000 52204000 39741000 34177 1942 12947 13305 53315;53316 53316 TFNEPGSPIVK 11 1 0 Unmodified _TFNEPGSPIVK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.3031 2 594.816596 1187.61864 77751.58 0.61013 0.00036291 -0.054895 -3.2653E-05 0.55523 0.00033026 594.816616890009 598.823525750484 56.534 1.5462 56.534 55.877 57.423 0 548 118 8 0 0 0 0.025123 1 32607 65.224 61.064 1 0.76552 0.85576 0 102650000 59959000 42687000 34178 1942 12947 13305 53317 53317 TFNEPGSPIVK 11 1 0 Unmodified _TFNEPGSPIVK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.8173 2 594.816596 1187.61864 79084.09 0.6115 0.00036373 -0.0080262 -4.7741E-06 0.60347 0.00035896 594.816758761521 598.823533877072 66.611 1.7042 66.611 65.985 67.689 0 505 111 8 0 0 0 0.00099342 2 34545 70.908 70.908 1 1.4496 1.1421 0 17593000 7317500 10276000 34179 1942 12947 13305 53318;53319 53319 TFNEPGSPIVK 11 1 0 Unmodified _TFNEPGSPIVK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.8236 2 594.816596 1187.61864 79274.58 0.49652 0.00029534 0.12246 7.284E-05 0.61897 0.00036818 594.816750025115 598.823595660511 67.101 1.7044 67.101 66.539 68.243 0 502 111 7 0 0 0 0.00093586 2 34019 71.349 71.349 1 1.437 1.1538 0 14532000 6154800 8377000 34180 1942 12947 13305 53320;53321 53321 TFNLPLLMLGGGGYTIR 17 0 1 Oxidation (M) _TFNLPLLM(ox)LGGGGYTIR_ TFNLPLLM(1)LGGGGYTIR TFNLPLLM(78.49)LGGGGYTIR 0 1 0 Q92769;B3KUJ5;Q59GB9 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.004 2 919.995297 1837.97604 64287.71 0.98483 0.00090604 0.017245 1.5865E-05 1.0021 0.00092191 919.994059561085 925.501567019063 130.71 1.2603 130.71 130.18 131.44 0 459 83 10 0 0 0 2.2353E-05 2 85046 78.486 70.382 1 1.1312 1.1537 0 26933000 12151000 14781000 34181 1952 12948 13306 53322;53323 53322 1801 TFNLPLLMLGGGGYTIR 17 0 1 Oxidation (M) _TFNLPLLM(ox)LGGGGYTIR_ TFNLPLLM(1)LGGGGYTIR TFNLPLLM(104.55)LGGGGYTIR 0 1 0 Q92769;B3KUJ5;Q59GB9 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.0016 2 919.995297 1837.97604 NaN NaN NaN 0.9504 0.00087436 NaN NaN NaN NaN 130.28 1.1637 130.28 129.75 130.91 0 0 0 0 2.063E-10 1 86974 104.55 83.596 1 NaN NaN 0 19109000 0 19109000 34182 1952 12948 13306 53324 53324 1801 TFNLPLLMLGGGGYTIR 17 0 1 Oxidation (M) _TFNLPLLM(ox)LGGGGYTIR_ TFNLPLLM(1)LGGGGYTIR TFNLPLLM(62.89)LGGGGYTIR 0 1 0 Q92769;B3KUJ5;Q59GB9 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.9944 2 919.995297 1837.97604 NaN NaN NaN -0.4461 -0.00041041 NaN NaN NaN NaN 130.31 1.2769 130.31 129.78 131.06 0 0 0 0 0.00024924 1 87051 62.891 49.691 1 NaN NaN 0 17163000 17163000 0 34183 1952 12948 13306 53325 53325 1801 TFNPGAGLPTDK 12 1 0 Unmodified _TFNPGAGLPTDK_ 0 0 0 Q53G61;Q53G21;P09661;H0YMA0;H0YLR3 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.3196 2 609.311677 1216.6088 78524.8 0.33484 0.00020402 0.49616 0.00030232 0.83101 0.00050634 609.311803295634 613.319070180346 62.386 0.86263 62.386 61.808 62.67 -3.8147E-06 150 75 4 0 0 0 0.012248 1 35606 45.137 45.137 1 1.0206 1.0358 0 13512000 5924300 7587400 34184 1461 12949 13307 53326 53326 TFNPGAGLPTDK 12 1 0 Unmodified _TFNPGAGLPTDK_ 0 0 0 Q53G61;Q53G21;P09661;H0YMA0;H0YLR3 Q53G61 Q53G61 SNRPA1 U2 small nuclear ribonucleoprotein A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.3113 2 609.311677 1216.6088 77211.08 0.46271 0.00028193 0.21208 0.00012922 0.67478 0.00041115 609.311347460457 613.318716510591 61.126 0.74091 61.126 60.764 61.505 0 185 70 4 0 0 0 0.00029759 2 35798 73.067 63.673 1 1.0377 1.0358 0 14883000 8151800 6731600 34185 1461 12949 13307 53327;53328 53328 TFNTSTGGLLLPSDTK 16 1 0 Unmodified _TFNTSTGGLLLPSDTK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.4387 2 826.430509 1650.84647 67336.27 0.85548 0.00070699 0.039239 3.2428E-05 0.89472 0.00073942 826.430425739906 830.437597665716 92.807 2.0363 92.807 92.225 94.261 0 1041 183 9 0 0 0 1.8015E-44 6 56417 165.51 165.51 1 0.40211 0.46229 0 203980000 144230000 59754000 34186 82 12950 13308 53329;53330;53331;53332;53333;53334 53331 TFNTSTGGLLLPSDTK 16 1 0 Unmodified _TFNTSTGGLLLPSDTK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.9327 2 826.430509 1650.84647 67024.98 1.0023 0.00082835 -0.080325 -6.6383E-05 0.92199 0.00076196 826.430320053479 830.437330172363 92.009 1.6703 92.009 91.426 93.096 0 799 141 8 0 0 0 5.0546E-13 4 57292 124.3 124.3 1 0.38313 0.44763 0 281140000 202480000 78659000 34187 82 12950 13308 53335;53336;53337;53338 53338 TFNTSTGGLLLPSDTK 16 1 0 Unmodified _TFNTSTGGLLLPSDTK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.9329 2 826.430509 1650.84647 67248.41 0.75601 0.00062479 0.72833 0.00060192 1.4843 0.0012267 826.431101834811 830.939797969086 93.498 0.29308 93.498 93.362 93.655 0 54 26 4 0 0 0 0.0032483 1 58090 37.426 31.702 1 0.39513 0.3994 0 8670100 5994300 2675800 34188 82 12950 13308 53339 53339 TFNTSTGGLLLPSDTK 16 1 0 Unmodified _TFNTSTGGLLLPSDTK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.4343 2 826.430509 1650.84647 NaN NaN NaN 0.30742 0.00025406 NaN NaN NaN NaN 93.285 0.18743 93.285 93.192 93.38 -7.6294E-06 0 0 0 0.0045565 2 57846 70.68 59.928 1 NaN NaN 0 10270000 10270000 0 34189 82 12950 13308 53340;53341 53341 TFNTSTGGLLLPSDTK 16 1 0 Unmodified _TFNTSTGGLLLPSDTK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 826.4313 2 826.430509 1650.84647 66279.66 0.84983 0.00070232 -0.089464 -7.3935E-05 0.76036 0.00062839 826.430426063324 830.437613233562 106.12 1.928 106.12 105.7 107.62 7.6294E-06 622 111 11 0 0 0 0.00013316 4 60981 76.728 76.728 1 0.30062 0.25564 0 62373000 49200000 13173000 34190 82 12950 13308 53342;53343;53344;53345 53344 TFNTSTGGLLLPSDTK 16 1 0 Unmodified _TFNTSTGGLLLPSDTK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 826.9324 2 826.430509 1650.84647 66492.16 0.78843 0.00065158 -0.060164 -4.9721E-05 0.72826 0.00060186 826.430440535643 830.437581825569 105.89 1.7775 105.89 105.51 107.29 -7.6294E-06 695 110 11 0 0 0 1.1192E-08 4 59915 106.32 106.32 1 0.29066 0.24569 0 57966000 44603000 13364000 34191 82 12950 13308 53346;53347;53348;53349 53348 TFPSAEDVVAR 11 0 1 Unmodified _TFPSAEDVVAR_ 0 0 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3076 2 596.303852 1190.59315 81021.27 0.66269 0.00039516 -0.058421 -3.4837E-05 0.60426 0.00036033 596.304058091483 601.307710952775 68.11 0.61909 68.11 67.813 68.432 0 198 50 6 0 0 0 0.001998 1 40506 63.216 57.295 1 1.4484 1.4759 0 20604000 7840900 12763000 34192 1400 12951 13309 53350 53350 TFPVDILFSK 10 1 0 Unmodified _TFPVDILFSK_ 0 0 0 A8K6G9;Q92620;B4DM30;B4DET0;J3KTG2 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.8265 2 583.826432 1165.63831 83433.23 0.81783 0.00047747 -0.096589 -5.6391E-05 0.72124 0.00042108 583.826246437996 587.833368336176 121.88 0.54326 121.88 121.7 122.25 -7.6294E-06 97 36 5 0 0 0 0.021656 2 78835 46.158 46.001 1 1.1934 1.2084 0 6746100 3165800 3580300 34193 760 12952 13310 53351;53352 53351 TFPVDILFSK 10 1 0 Unmodified _TFPVDILFSK_ 0 0 0 A8K6G9;Q92620;B4DM30;B4DET0;J3KTG2 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3287 2 583.826432 1165.63831 84709.77 0.91916 0.00053663 -0.093178 -5.44E-05 0.82598 0.00048223 584.32793851668 587.833427828343 121.52 0.64075 121.52 121.15 121.79 0 118 46 4 0 0 0 0.02362 2 80472 45.368 44.318 1 1.3537 1.437 0 4106600 1743500 2363100 34194 760 12952 13310 53353;53354 53353 TFQCELCSYTCPR 13 0 1 Unmodified _TFQCELCSYTCPR_ 0 0 0 P49711 P49711 P49711 CTCF Transcriptional repressor CTCF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 861.3574 2 861.35765 1720.70075 66806.31 0.59368 0.00051137 -0.63846 -0.00054995 -0.044785 -3.8576E-05 861.357855043751 866.863998339215 84.395 0.5127 84.395 84.208 84.721 0 79 35 5 0 0 0 0.042525 2 45248 30.872 27.227 1 1.037 0.91283 0 1873300 962040 911250 34195 1585 12953 13311 53355;53356 53356 TFSFAIPLIEK 11 1 0 Unmodified _TFSFAIPLIEK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3608 2 633.360639 1264.70673 76787.71 0.73575 0.000466 0.10511 6.6574E-05 0.84086 0.00053257 633.3606715816 637.367684732669 124.04 1.4405 124.04 123.5 124.95 0 673 101 10 0 0 0 0.00022817 4 80878 91.584 86.596 1 1.0958 1.2342 0 123810000 58260000 65551000 34196 2065 12954 13312 53357;53358;53359;53360 53359 TFSFAIPLIEK 11 1 0 Unmodified _TFSFAIPLIEK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3604 2 633.360639 1264.70673 NaN NaN NaN 0.20163 0.00012771 NaN NaN NaN NaN 125.42 0.29925 125.42 125.31 125.61 0 0 0 0 0.039785 1 81459 55.567 43.719 1 NaN NaN 0 800830 800830 0 34197 2065 12954 13312 53361 53361 TFSFAIPLIEK 11 1 0 Unmodified _TFSFAIPLIEK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.361 2 633.360639 1264.70673 76819.81 0.75647 0.00047912 0.16708 0.00010582 0.92355 0.00058494 633.36069689932 637.367749979721 123.56 1.8653 123.56 123.05 124.92 7.6294E-06 671 129 10 0 0 0 7.4243E-05 4 82478 98.249 92.146 1 1.1196 1.2633 0 127080000 59932000 67153000 34198 2065 12954 13312 53362;53363;53364;53365 53364 TFSFAIPLIEK 11 1 0 Unmodified _TFSFAIPLIEK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.3682 2 633.360639 1264.70673 75493.45 0.69258 0.00043866 0.21051 0.00013333 0.90309 0.00057198 633.360881484208 637.367658138728 134.68 0.26715 134.68 134.59 134.86 0 30 5 8 0 0 0 7.4055E-06 1 82352 109.83 109.83 1 1.023 0.88258 0 101890000 47620000 54271000 34199 2065 12954 13312 53366 53366 TFSFAIPLIEK 11 1 0 Unmodified _TFSFAIPLIEK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.3683 2 633.360639 1264.70673 76283.46 0.84516 0.00053529 0.47717 0.00030222 1.3223 0.00083751 633.361131924862 637.367824869289 134.64 0.2565 134.64 134.5 134.76 0 37 6 9 0 0 0 0.00018006 2 81393 93.667 88.679 1 1.184 1.0083 0 86632000 40389000 46244000 34200 2065 12954 13312 53367;53368 53367 TFSFAIPLIER 11 0 1 Unmodified _TFSFAIPLIER_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q53FI9 B4DW97 B4DW97 DDX50;mcdrh ATP-dependent RNA helicase DDX50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.3709 2 647.363713 1292.71287 75950.4 0.79584 0.0005152 0.017853 1.1557E-05 0.81369 0.00052675 647.363614761062 652.367569306753 125 0.84469 125 124.66 125.51 0 198 57 6 0 0 0 0.00071156 3 81196 73.067 64.204 1 1.3226 1.3507 0 6747200 3359300 3387800 34201 416 12955 13313 53369;53370;53371 53370 TFSFAIPLIER 11 0 1 Unmodified _TFSFAIPLIER_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q53FI9 B4DW97 B4DW97 DDX50;mcdrh ATP-dependent RNA helicase DDX50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3689 2 647.363713 1292.71287 77877.21 1.2146 0.00078629 -0.37961 -0.00024574 0.835 0.00054055 647.363464813258 652.367428222011 124.54 0.7687 124.54 124.24 125 0 167 51 5 0 0 0 0.00044841 3 82800 77.677 68.814 1 1.4685 1.4616 0 7184200 3596300 3587900 34202 416 12955 13313 53372;53373;53374 53373 TFSLTEVR 8 0 1 Unmodified _TFSLTEVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.7631 2 476.758549 951.502546 87823.33 -0.017438 -8.3139E-06 0.38759 0.00018478 0.37015 0.00017647 476.758625752086 481.762712062116 69.626 1.2412 69.626 69.018 70.259 0 425 109 5 0 0 0 0.0070613 1 40210 84.568 72.847 1 0.90634 0.98989 0 52096000 28457000 23639000 34203 1803 12956 13314 53375 53375 TFSLTEVR 8 0 1 Unmodified _TFSLTEVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.7635 2 476.758549 951.502546 88008.27 0.19979 9.5254E-05 0.30135 0.00014367 0.50114 0.00023892 476.758605123954 481.762619711047 68.285 1.272 68.285 67.712 68.984 0 364 107 5 0 0 0 0.0070613 3 40358 84.568 72.137 1 0.87593 1.0112 0 55472000 28649000 26823000 34204 1803 12956 13314 53376;53377;53378 53378 TFSLTEVR 8 0 1 Unmodified _TFSLTEVR_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.763 2 476.758549 951.502546 87234.31 0.19939 9.5059E-05 0.59044 0.0002815 0.78983 0.00037656 476.758533777767 481.762530802076 79.868 1.2401 79.868 79.321 80.561 0 338 74 6 0 0 0 0.035324 1 42016 49.097 44.96 1 1.5766 1.2957 0 8625300 3592400 5032900 34205 1803 12956 13314 53379 53379 TFTDCFNCLPIAAIVDEK 18 1 0 Unmodified _TFTDCFNCLPIAAIVDEK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;H0Y3Y6;C4TNW5;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1061.5084 2 1057.50028 2112.98601 64563.87 0.30961 0.00032741 0.99823 0.0010556 1.3078 0.001383 1057.50172007853 1061.50730421093 129 1.2344 129 128.63 129.86 0 317 85 7 0 0 0 1.6129E-77 3 83964 193.06 193.06 1 1.2657 1.4006 0 57878000 20424000 37454000 34206 1632;343;1633 12957 13315 53380;53381;53382 53381 TFTDCFNCLPIAAIVDEK 18 1 0 Unmodified _TFTDCFNCLPIAAIVDEK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;H0Y3Y6;C4TNW5;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1058.0029 2 1057.50028 2112.98601 NaN NaN NaN 0.54156 0.0005727 NaN NaN NaN NaN 129.46 0.4959 129.46 129.42 129.92 0 0 0 0 0.0022853 2 84607 51.875 46.268 1 NaN NaN 0 7664700 7664700 0 34207 1632;343;1633 12957 13315 53383;53384 53384 TFTDCFNCLPIAAIVDEK 18 1 0 Unmodified _TFTDCFNCLPIAAIVDEK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;H0Y3Y6;C4TNW5;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1062.0093 2 1057.50028 2112.98601 NaN NaN NaN 0.17318 0.00018314 NaN NaN NaN NaN 128.55 1.2807 128.55 128.27 129.55 0 0 0 0 6.0206E-17 1 85895 108.17 108.17 1 NaN NaN 0 34967000 0 34967000 34208 1632;343;1633 12957 13315 53385 53385 TFTDCFNCLPIAAIVDEK 18 1 0 Unmodified _TFTDCFNCLPIAAIVDEK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;H0Y3Y6;C4TNW5;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1057.5349 2 1057.50028 2112.98601 57921.06 0.36119 0.00038196 -0.36943 -0.00039068 -0.0082442 -8.7182E-06 1058.00188758829 1062.00860395604 134.77 0.27869 134.77 134.62 134.9 0 22 5 9 0 0 0 4.988E-17 2 82436 123.29 119.97 1 2.3717 2.0714 0 173790000 52495000 121290000 34209 1632;343;1633 12957 13315 53386;53387 53386 TFTDCFNCLPIAAIVDEK 18 1 0 Unmodified _TFTDCFNCLPIAAIVDEK_ 0 0 0 P62136;A0A140VJS9;B3KXM2;H0Y3Y6;C4TNW5;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CB;PPP1CC;HEL-S-80p Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1057.5325 2 1057.50028 2112.98601 58616.67 0.49778 0.0005264 -0.42677 -0.00045131 0.071014 7.5097E-05 1058.00191026342 1062.00832097746 134.74 0.33946 134.74 134.56 134.9 0 24 7 9 0 0 0 3.9924E-26 1 81509 123.1 123.1 1 2.318 1.9876 0 134010000 39728000 94280000 34210 1632;343;1633 12957 13315 53388 53388 TFTMEGGPGGDPQLEGLIPR 20 0 1 Oxidation (M) _TFTM(ox)EGGPGGDPQLEGLIPR_ TFTM(1)EGGPGGDPQLEGLIPR TFTM(42.21)EGGPGGDPQLEGLIPR 0 1 0 A0A024RCS7;Q9BW19;B4DMA8 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1049.5076 2 1044.50695 2086.99935 NaN NaN NaN -0.49688 -0.00051899 NaN NaN NaN NaN 107.16 0.24422 107.16 107.04 107.28 7.6294E-06 0 0 0 0.00071234 1 66677 42.209 28.53 1 NaN NaN 0 4462200 0 4462200 34211 371 12958 13316 53389 53389 276 TFTMEGGPGGDPQLEGLIPR 20 0 1 Oxidation (M) _TFTM(ox)EGGPGGDPQLEGLIPR_ TFTM(1)EGGPGGDPQLEGLIPR TFTM(51.87)EGGPGGDPQLEGLIPR 0 1 0 A0A024RCS7;Q9BW19;B4DMA8 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1050.0134 2 1044.50695 2086.99935 NaN NaN NaN -0.53739 -0.00056131 NaN NaN NaN NaN 106.7 0.35153 106.7 106.45 106.8 -7.6294E-06 0 0 0 0.00014721 2 67910 51.875 43.146 1 NaN NaN 0 3714400 0 3714400 34212 371 12958 13316 53390;53391 53391 276 TFVLEVMGR 9 0 1 Oxidation (M) _TFVLEVM(ox)GR_ TFVLEVM(1)GR TFVLEVM(48.28)GR 0 1 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;B4E162;P17858;Q01813;Q5VSR5 A0A024R0Y5;P17858;Q01813 Q01813 PFKM;PFKL;PFKP ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.2849 2 534.281334 1066.54812 79350.26 0.70131 0.00037469 -0.92005 -0.00049157 -0.21875 -0.00011687 534.280717761191 539.285073255772 74.587 0.74457 74.587 73.925 74.67 0 118 63 4 0 0 0 0.011814 1 44582 48.283 32.402 1 4.8238 4.8353 0 18091000 2774600 15316000 34213 1677;61;1495 12959 13317 53392 53392 33 TFVSGACDASIK 12 1 0 Unmodified _TFVSGACDASIK_ 0 0 0 C9JIS1;C9JXA5;Q6FHM2;P62879;E7EP32 C9JIS1 C9JIS1 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.3117 2 628.302995 1254.59144 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.29 1 48.29 47.79 48.79 0 0 0 0 0.0064796 1 26987 61.958 41.629 1 34214 1135 12960 13318 53393 53393 TFYNELR 7 0 1 Unmodified _TFYNELR_ 0 0 0 Q562L9 Q562L9 Q562L9 ACT MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.7421 2 471.737617 941.460681 88757.34 0.23722 0.00011191 0.42907 0.00020241 0.6663 0.00031432 471.737783258531 476.741878542757 51.943 1.2192 51.943 51.403 52.622 0 261 97 4 0 0 0 0.02687 1 28719 81.297 31.257 1 2.1709 2.2473 0 23177000 8783000 14393000 34215 1796 12961 13319 53394 53394 TFYNELR 7 0 1 Unmodified _TFYNELR_ 0 0 0 Q562L9 Q562L9 Q562L9 ACT MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.7412 2 471.737617 941.460681 89593.64 0.24966 0.00011777 0.11345 5.352E-05 0.36311 0.00017129 471.737310455014 476.741823352662 50.399 1.0105 50.399 50.117 51.127 0 251 90 4 0 0 0 0.031725 1 28493 66.682 27.14 1 2.2803 2.4586 0 26117000 7327200 18790000 34216 1796 12961 13319 53395 53395 TGAAPIIDVVR 11 0 1 Unmodified _TGAAPIIDVVR_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9;E9PLX7 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.331 2 556.327131 1110.63971 80583.8 0.55819 0.00031054 -0.025125 -1.3978E-05 0.53307 0.00029656 556.3273381791 561.331143703643 82.93 1.3008 82.93 82.563 83.864 0 648 101 9 0 0 0 0.00032579 3 51152 87.298 65.448 1 0.75312 0.88788 0 1182200000 662520000 519640000 34217 1247 12962 13320 53396;53397;53398 53397 TGAAPIIDVVR 11 0 1 Unmodified _TGAAPIIDVVR_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9;E9PLX7 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.3315 2 556.327131 1110.63971 81124.88 0.69945 0.00038912 -0.38419 -0.00021374 0.31526 0.00017539 556.327403774994 561.330905739087 95.985 2.7353 95.985 95.456 98.191 0 895 169 14 0 0 0 0.0048085 3 54105 57.348 48.204 1 0.82689 0.71945 0 309600000 171080000 138520000 34218 1247 12962 13320 53399;53400;53401 53400 TGAAPIIDVVR 11 0 1 Unmodified _TGAAPIIDVVR_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9;E9PLX7 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 561.3325 2 556.327131 1110.63971 80608.52 0.45502 0.00025314 -0.1053 -5.8583E-05 0.34972 0.00019456 556.327410316033 561.331080466055 95.829 2.7089 95.829 95.32 98.029 -7.6294E-06 706 158 10 0 0 0 0.0036568 4 53167 59.426 50.894 1 0.81445 0.71155 0 271620000 149640000 121970000 34219 1247 12962 13320 53402;53403;53404;53405 53404 TGAHLELSLAK 11 1 0 Unmodified _TGAHLELSLAK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;C9J5E5;C9JIZ1;H7C0A4;C9JZI8;C9JHS7;C9JHZ8;C9JES8 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.3319 2 570.324588 1138.63462 84340.21 0.8222 0.00046892 -0.25211 -0.00014379 0.57008 0.00032513 570.324854704276 574.331462008269 56.244 0.34575 56.244 56.088 56.434 0 67 31 4 0 0 0 0.00061041 1 31676 73.841 73.841 1 1.4248 1.4484 0 6405800 2560200 3845700 34220 154 12963 13321 53406 53406 TGAIVDVPVGEELLGR 16 0 1 Unmodified _TGAIVDVPVGEELLGR_ 0 0 0 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.9528 2 812.948869 1623.88319 NaN NaN NaN 1.311 0.0010657 NaN NaN NaN NaN 114.31 0.40036 114.31 114.1 114.5 -7.6294E-06 0 0 0 0.0038892 1 74352 55.04 40.361 1 NaN NaN 0 2827800 0 2827800 34221 1518 12964 13322 53407 53407 TGDFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TGDFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.4003 3 843.394458 2527.16155 65689.75 0.86976 0.00073355 -0.29997 -0.000253 0.56978 0.00048055 843.728637515678 846.399864984146 85.151 1.4109 85.151 84.691 86.102 0 921 118 12 0 0 0 6.165E-23 6 51395 115.96 111.71 1 2.1915 2.5865 0 360590000 115440000 245160000 34222 28 12965 13323 53408;53409;53410;53411;53412;53413 53410 TGDFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TGDFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.3984 3 843.394458 2527.16155 65828.7 0.91056 0.00076796 -1.121 -0.00094548 -0.21048 -0.00017752 843.72751523641 846.399231816785 86.455 0.77376 86.455 86.102 86.876 0 201 57 5 0 0 0 2.892E-06 3 51978 47.05 44.287 1 2.2992 2.2758 0 19280000 7143700 12136000 34223 28 12965 13323 53414;53415;53416 53415 TGDFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TGDFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.4008 3 843.394458 2527.16155 65958.39 0.77349 0.00065236 -0.2183 -0.00018412 0.55519 0.00046824 843.728738491362 846.399893765463 84.166 1.4631 84.166 83.765 85.228 0 824 123 12 0 0 0 7.081E-23 3 51475 114.57 114.57 1 2.1863 2.5731 0 405240000 133860000 271380000 34224 28 12965 13323 53417;53418;53419 53417 TGDFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TGDFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.7291 3 843.394458 2527.16155 NaN NaN NaN -0.57461 -0.00048462 NaN NaN NaN NaN 84.904 0.186 84.904 84.795 84.981 0 0 0 0 0.024589 2 52201 26.157 22.711 1 NaN NaN 0 7124700 7124700 0 34225 28 12965 13323 53420;53421 53420 TGDFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TGDFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 846.4011 3 843.394458 2527.16155 65431 0.7389 0.00062318 -0.28491 -0.00024029 0.45399 0.00038289 843.728700095547 846.399891033384 97.566 1.4077 97.566 97.079 98.487 0 571 84 13 0 0 0 4.9868E-30 2 54839 126.86 126.86 1 3.119 2.6612 0 65086000 15739000 49347000 34226 28 12965 13323 53422;53423 53423 TGDFQLHTNVNDGTEFGGSIYQK 23 1 0 Unmodified _TGDFQLHTNVNDGTEFGGSIYQK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 846.399 3 843.394458 2527.16155 65774.55 0.43672 0.00036832 -0.058218 -4.9101E-05 0.3785 0.00031922 843.728836974824 846.400094111207 97.425 1.3989 97.425 96.907 98.306 -7.6294E-06 511 77 13 0 0 0 2.1649E-12 2 53901 90.978 90.978 1 3.1234 2.6419 0 58916000 14640000 44276000 34227 28 12965 13323 53424;53425 53425 TGDPQETLRR 10 0 2 Unmodified _TGDPQETLRR_ 0 0 1 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 398.2111 3 391.538793 1171.59455 115069.1 0.26839 0.00010509 0.058983 2.3094E-05 0.32738 0.00012818 391.539070373668 398.211251353725 18.714 0.50008 18.714 18.51 19.01 0 92 35 5 0 0 0 0.0005926 1 5344 59.426 52.298 1 0.55247 0.54435 0 6565300 4120300 2445000 34228 186;1747 12966 13324 53426 53426 TGEDEDEEDNDALLK 15 1 0 Unmodified _TGEDEDEEDNDALLK_ 0 0 0 A0A087WWS1;Q96FV9 A0A087WWS1 A0A087WWS1 THOC1 THO complex subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.8594 2 846.857768 1691.70098 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.447 1 49.447 48.947 49.947 3.8147E-06 0 0 0 4.0577E-25 1 27164 140.14 122.92 1 34229 428 12967 13325 53427 53427 TGEDEDEEDNDALLK 15 1 0 Unmodified _TGEDEDEEDNDALLK_ 0 0 0 A0A087WWS1;Q96FV9 A0A087WWS1 A0A087WWS1 THOC1 THO complex subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.8594 2 846.857768 1691.70098 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.277 1 48.277 47.777 48.777 0 0 0 0 7.0655E-05 1 26978 91.961 76.39 1 34230 428 12967 13325 53428 53428 TGEEINFGK 9 1 0 Unmodified _TGEEINFGK_ 0 0 0 Q05D78;F8W7U8;A0A024R395;P49959 Q05D78 Q05D78 MRE11A Double-strand break repair protein MRE11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 501.753 2 497.745639 993.476725 88130.77 0.36003 0.00017921 -0.84863 -0.0004224 -0.4886 -0.0002432 497.74535700073 501.752419077145 42.437 0.54395 42.437 42.178 42.721 -3.8147E-06 137 42 5 0 0 0 0.00068897 1 22643 95.741 71.587 1 0.61856 0.60637 0 20782000 11510000 9272500 34231 131 12968 13326 53429 53429 TGEEINFGK 9 1 0 Unmodified _TGEEINFGK_ 0 0 0 Q05D78;F8W7U8;A0A024R395;P49959 Q05D78 Q05D78 MRE11A Double-strand break repair protein MRE11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.7455 2 497.745639 993.476725 88956.43 0.41974 0.00020892 -1.3873 -0.0006905 -0.96752 -0.00048158 497.745373049691 501.752722635809 41.236 0.68003 41.236 40.994 41.674 3.8147E-06 122 58 5 0 0 0 0.0065285 2 22204 63.961 47.184 1 0.39031 0.39395 0 13269000 8998300 4270600 34232 131 12968 13326 53430;53431 53431 TGEEINFGK 9 1 0 Unmodified _TGEEINFGK_ 0 0 0 Q05D78;F8W7U8;A0A024R395;P49959 Q05D78 Q05D78 MRE11A Double-strand break repair protein MRE11A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.752 2 497.745639 993.476725 NaN NaN NaN -2.3829 -0.0011861 NaN NaN NaN NaN 41.15 0.14582 41.15 41.071 41.217 0 0 0 0 0.031882 1 22103 52.867 24.984 1 NaN NaN 0 5339100 0 5339100 34233 131 12968 13326 53432 53432 TGEELGFDYGDR 12 0 1 Unmodified _TGEELGFDYGDR_ 0 0 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.7968 2 679.796588 1357.57862 76629.03 0.091097 6.1928E-05 0.007065 4.8027E-06 0.098162 6.673E-05 679.796691606328 684.800871317286 69.875 0.3472 69.875 69.733 70.08 0 85 32 4 0 0 0 0.00016719 2 40661 91.855 87.809 1 0.69852 0.71106 0 14874000 9465100 5408800 34234 364 12969 13327 53433;53434 53433 TGEELGFDYGDR 12 0 1 Unmodified _TGEELGFDYGDR_ 0 0 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.7978 2 679.796588 1357.57862 76610.21 0.36387 0.00024736 0.40874 0.00027786 0.77261 0.00052522 679.796880442823 684.801108471353 68.645 0.453 68.645 68.557 69.01 7.6294E-06 99 39 5 0 0 0 0.00016719 1 40823 91.855 77.697 1 0.64611 0.64569 0 16884000 10919000 5965200 34235 364 12969 13327 53435 53435 TGEEVGFVVDAK 12 1 0 Unmodified _TGEEVGFVVDAK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.8174 2 625.816793 1249.61903 NaN NaN NaN 0.73684 0.00046113 NaN NaN NaN NaN 70.987 0.44006 70.987 70.766 71.206 0 0 0 0 0.0014658 1 41358 77.744 55.751 1 NaN NaN 0 4846300 4846300 0 34236 1402 12970 13328 53436 53436 TGEEVGFVVDAK 12 1 0 Unmodified _TGEEVGFVVDAK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.8178 2 625.816793 1249.61903 NaN NaN NaN 1.5236 0.00095349 NaN NaN NaN NaN 69.664 0.40423 69.664 69.545 69.95 0 0 0 0 0.00068053 1 41500 86.344 70.146 1 NaN NaN 0 5524500 5524500 0 34237 1402 12970 13328 53437 53437 TGENVEDAFLEAAK 14 1 0 Unmodified _TGENVEDAFLEAAK_ 0 0 0 A0A024R845;P61106;X6RFL8 A0A024R845 A0A024R845 RAB14 Ras-related protein Rab-14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.3671 2 747.359553 1492.70455 NaN NaN NaN 0.15824 0.00011826 NaN NaN NaN NaN 94.343 0.6735 94.343 93.993 94.667 0 0 0 0 0.0012131 1 57161 72.958 48.103 1 NaN NaN 0 13158000 0 13158000 34238 242 12971 13329 53438 53438 TGENVEDAFLEAAK 14 1 0 Unmodified _TGENVEDAFLEAAK_ 0 0 0 A0A024R845;P61106;X6RFL8 A0A024R845 A0A024R845 RAB14 Ras-related protein Rab-14 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.3656 2 747.359553 1492.70455 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.479 1 93.479 92.979 93.979 7.6294E-06 0 0 0 0.0002582 1 58022 88.338 63.483 1 34239 242 12971 13329 53439 53439 TGENVEDAFLEAAK 14 1 0 Unmodified _TGENVEDAFLEAAK_ 0 0 0 A0A024R845;P61106;X6RFL8 A0A024R845 A0A024R845 RAB14 Ras-related protein Rab-14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.3663 2 747.359553 1492.70455 72532.35 0.88469 0.00066118 -0.66414 -0.00049635 0.22055 0.00016483 747.360010711848 751.36636493886 108.03 0.56747 108.03 107.66 108.23 0 114 31 7 0 0 0 0.042218 1 61873 27.676 21.143 1 1.5979 1.3093 0 2511500 919840 1591600 34240 242 12971 13329 53440 53440 TGESILSLLR 10 0 1 Unmodified _TGESILSLLR_ 0 0 0 H7C0X4;B4DS50;C9J7S5;Q92685 H7C0X4 H7C0X4 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.8227 2 544.819138 1087.62372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.75 1 113.75 113.25 114.25 7.6294E-06 0 0 0 0.00045959 1 72062 72.643 47.72 1 34241 1028 12972 13330 53441 53441 TGEYPVPLIR 10 0 1 Unmodified _TGEYPVPLIR_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;E9PJM9 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.8262 2 572.821681 1143.62881 80761.96 0.63078 0.00036132 -0.61319 -0.00035125 0.017585 1.0073E-05 572.820543692185 577.825905046348 88.005 0.66765 88.005 87.675 88.342 0 114 56 3 0 0 0 0.0026779 1 53103 67.993 67.993 1 1.8398 1.8977 0 19926000 10475000 9451300 34242 545 12973 13331 53442 53442 TGEYPVPLIR 10 0 1 Unmodified _TGEYPVPLIR_ 0 0 0 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;E9PJM9 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.8258 2 572.821681 1143.62881 NaN NaN NaN -0.032856 -1.882E-05 NaN NaN NaN NaN 87.024 0.44711 87.024 86.809 87.256 0 0 0 0 0.001837 1 53667 83.783 83.783 1 NaN NaN 0 18956000 0 18956000 34243 545 12973 13331 53443 53443 TGFFEFQAAK 10 1 0 Unmodified _TGFFEFQAAK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;Q9NVC0 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.2822 2 573.284931 1144.55531 76073.15 0.67372 0.00038623 -0.43536 -0.00024958 0.23836 0.00013665 573.285016115505 577.291505151911 87.649 0.49335 87.649 87.3 87.794 0 111 38 6 0 0 0 0.022046 1 53999 46.001 38.781 1 1.0405 1.0836 0 24500000 10771000 13729000 34244 883 12974 13332 53444 53444 TGFINLDK 8 1 0 Unmodified _TGFINLDK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 458.2555 2 454.247818 906.481082 NaN NaN NaN 0.36764 0.000167 NaN NaN NaN NaN 66.333 0.96379 66.333 66.003 66.967 0 0 0 0 0.040235 1 38180 53.775 38.999 1 NaN NaN 0 31619000 0 31619000 34245 1398 12975 13333 53445 53445 TGFINLDK 8 1 0 Unmodified _TGFINLDK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.2477 2 454.247818 906.481082 89717.66 -0.028664 -1.3021E-05 0.0097724 4.4391E-06 -0.018892 -8.5817E-06 454.247676389331 458.254774002495 65.066 0.99352 65.066 64.701 65.694 0 340 81 7 0 0 0 0.010808 2 38420 71.379 53.394 1 0.76437 0.85669 0 80117000 43781000 36336000 34246 1398 12975 13333 53446;53447 53447 TGFINLDKPSNPSSHEVVAWIR 22 1 1 Unmodified _TGFINLDKPSNPSSHEVVAWIR_ 0 0 1 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.1033 3 823.095796 2466.26556 69622.84 0.86037 0.00070817 -0.48778 -0.00040149 0.37259 0.00030668 823.429837859862 829.102870930128 109.37 0.45842 109.37 109.21 109.67 0 74 20 9 0 0 0 0.039329 1 62084 16.717 16.717 1 0.68002 0.57201 0 4431300 2816000 1615200 34247 1398 12976 13334 53448 53448 TGGAYGEDLGADYNLSQVCDGK 22 1 0 Unmodified _TGGAYGEDLGADYNLSQVCDGK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1149.5101 2 1145.50005 2288.98556 58419.11 0.28518 0.00032667 0.39173 0.00044872 0.6769 0.00077539 1146.00159950621 1149.50731293471 86.929 0.33456 86.929 86.735 87.069 -7.6294E-06 54 22 5 0 0 0 7.8219E-08 3 52337 63.682 63.682 1 1.3163 1.3498 0 13023000 7546500 5476900 34248 587 12977 13335 53449;53450;53451 53449 TGGLEIDSDFGGFR 14 0 1 Unmodified _TGGLEIDSDFGGFR_ 0 0 0 O95831;A0A140VK04;E9PMA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.849 2 735.846613 1469.67867 69527 1.0612 0.00078084 0.22237 0.00016363 1.2835 0.00094447 736.348909278678 741.351647600543 114.19 0.54163 114.19 113.93 114.48 0 129 22 8 0 0 0 0.0005188 1 66578 60.255 46.902 1 1.1719 1.0077 0 6725500 3171500 3554000 34249 1431 12978 13336 53452 53452 TGGLEIDSDFGGFR 14 0 1 Unmodified _TGGLEIDSDFGGFR_ 0 0 0 O95831;A0A140VK04;E9PMA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.8505 2 735.846613 1469.67867 69401.17 0.77862 0.00057294 0.44402 0.00032673 1.2226 0.00089967 736.349494859123 740.850079084456 114.12 0.66347 114.12 113.88 114.54 0 118 27 6 0 0 0 0.00010434 1 65639 84.507 71.154 1 1.0531 0.87371 0 5391000 2422300 2968700 34250 1431 12978 13336 53453 53453 TGGPAYGPSSDVSTASETESEK 22 1 0 Unmodified _TGGPAYGPSSDVSTASETESEK_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1078.9767 2 1078.97693 2155.93932 60269.13 0.13143 0.00014181 0.18517 0.00019979 0.3166 0.0003416 1079.4787962346 1082.98411187362 43.749 0.40749 43.749 43.545 43.952 0 129 35 5 0 0 0 7.5157E-09 4 23414 81.632 81.632 1 1.1759 1.2389 0 16402000 7244000 9158400 34251 1593 12979 13337 53454;53455;53456;53457 53455 TGGPAYGPSSDVSTASETESEK 22 1 0 Unmodified _TGGPAYGPSSDVSTASETESEK_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1083.483 2 1078.97693 2155.93932 59845.41 0.26959 0.00029088 -0.019337 -2.0864E-05 0.25025 0.00027001 1079.47820714584 1083.48492628371 42.942 0.4452 42.942 42.743 43.188 0 150 35 6 0 0 0 5.8715E-09 2 23197 82.908 82.908 1 1.2676 1.3618 0 21474000 9162400 12311000 34252 1593 12979 13337 53458;53459 53459 TGGPAYGPSSDVSTASETESEKR 23 1 1 Unmodified _TGGPAYGPSSDVSTASETESEKR_ 0 0 1 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.0297 3 771.687419 2312.04043 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.564 1 34.564 34.064 35.064 0 0 0 0 0.00069103 1 17514 45.135 36.97 1 34253 1593 12980 13338 53460 53460 TGGPAYGPSSDVSTASETESEKR 23 1 1 Unmodified _TGGPAYGPSSDVSTASETESEKR_ 0 0 1 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 772.0211 3 771.687419 2312.04043 70130.45 0.60045 0.00046336 -0.11752 -9.0685E-05 0.48293 0.00037267 771.687086188587 777.694748234261 41.697 0.40404 41.697 41.492 41.896 0 119 31 6 0 0 0 0.032136 1 19392 12.08 12.08 1 1.0949 0.98223 0 2026200 982540 1043600 34254 1593 12980 13338 53461 53461 TGHYLTVK 8 1 0 Unmodified _TGHYLTVK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.7626 2 459.75581 917.497067 88946.07 0.18402 8.4604E-05 -0.50447 -0.00023193 -0.32045 -0.00014733 459.755540893613 463.762516768821 24.133 0.60287 24.133 23.936 24.538 0 100 25 6 0 0 0 0.0037462 1 9905 95.815 52.946 1 1.1677 1.3156 0 115340000 54490000 60846000 34255 1379 12981 13339 53462 53462 TGHYLTVK 8 1 0 Unmodified _TGHYLTVK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.7629 2 459.75581 917.497067 89512.51 0.13619 6.2616E-05 -0.072675 -3.3413E-05 0.06352 2.9204E-05 459.755708948729 463.762890029686 23.458 0.50235 23.458 23.246 23.748 0 108 21 8 0 0 0 0.00097324 2 9291 121.67 66.141 1 1.2004 1.3414 0 94782000 42723000 52059000 34256 1379 12981 13339 53463;53464 53463 TGHYLTVK 8 1 0 Unmodified _TGHYLTVK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 307.1738 3 306.839632 917.497067 110792.6 0.17573 5.3921E-05 0.0013604 4.1743E-07 0.17709 5.4339E-05 306.839571536071 309.510992752869 23.44 0.35925 23.44 23.314 23.673 0 58 15 6 0 0 0 0.038427 1 9323 23.768 11.813 1 1.1047 1.1247 0 12391000 5730000 6661300 34257 1379 12981 13339 53465 53465 TGHYLTVK 8 1 0 Unmodified _TGHYLTVK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 463.7627 2 459.75581 917.497067 88383.28 0.076678 3.5253E-05 -0.12133 -5.5783E-05 -0.044653 -2.053E-05 459.755663875251 463.76278600193 25.806 0.52137 25.806 25.626 26.147 1.9073E-06 86 20 7 0 0 0 0.010439 2 9014 72.23 34.07 1 1.1092 0.91046 0 9158600 4180500 4978100 34258 1379 12981 13339 53466;53467 53466 TGIDLGTTGR 10 0 1 Unmodified _TGIDLGTTGR_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;A0A0U1RQW2;H0Y4X3;A0A087X122 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.7643 2 495.764363 989.514173 NaN NaN NaN 0.38494 0.00019084 NaN NaN NaN NaN 44.459 0.55567 44.459 44.247 44.803 0 0 0 0 0.014806 1 24208 58.37 21.61 1 NaN NaN 0 28868000 28868000 0 34259 588 12982 13340 53468 53468 TGIDLGTTGR 10 0 1 Unmodified _TGIDLGTTGR_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;A0A0U1RQW2;H0Y4X3;A0A087X122 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.7687 2 495.764363 989.514173 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.27 1 44.27 43.77 44.77 0 0 0 0 0.0069046 1 24160 61.593 20.711 1 34260 588 12982 13340 53469 53469 TGIDLGTTGR 10 0 1 Unmodified _TGIDLGTTGR_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;A0A0U1RQW2;H0Y4X3;A0A087X122 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.7685 2 495.764363 989.514173 85831.94 -0.037016 -1.8351E-05 0.21196 0.00010508 0.17495 8.6732E-05 495.764482340275 500.768484935972 51.807 0.65285 51.807 51.455 52.108 0 145 53 4 0 0 0 0.049319 1 25473 36.318 18.805 1 0.58093 0.48579 0 3769500 2339900 1429700 34261 588 12982 13340 53470 53470 TGIDLGTTGR 10 0 1 Unmodified _TGIDLGTTGR_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;Q6MZY7;A0A0U1RQW2;H0Y4X3;A0A087X122 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140;DKFZp686C17209 RNA-binding protein 39 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.7644 2 495.764363 989.514173 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.994 1 51.994 51.494 52.494 0 0 0 0 0.046242 1 25082 44.863 21.844 1 34262 588 12982 13340 53471 53471 TGIEQGSDAGYLCESQK 17 1 0 Unmodified _TGIEQGSDAGYLCESQK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 921.9128 2 921.912355 1841.81016 64143.71 0.46434 0.00042808 -0.011324 -1.044E-05 0.45302 0.00041764 921.912515273141 926.420793302249 52.361 0.42972 52.361 52.127 52.557 -3.8147E-06 146 31 6 0 0 0 1.0115E-12 2 29021 119.01 119.01 1 1.2528 1.236 0 24965000 9586700 15379000 34263 1228 12983 13341 53472;53473 53473 TGIEQGSDAGYLCESQK 17 1 0 Unmodified _TGIEQGSDAGYLCESQK_ 0 0 0 E9KL44;P40939;B4DRH6;B4DDZ5 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.9125 2 921.912355 1841.81016 64526.69 0.50079 0.00046168 -0.018424 -1.6985E-05 0.48236 0.0004447 921.912670195178 926.421110455662 51.227 0.48017 51.227 51.008 51.488 0 124 37 6 0 0 0 0.00015741 1 28927 54.094 54.094 1 1.2576 1.2655 0 13520000 5130100 8390200 34264 1228 12983 13341 53474 53474 TGISDVFAK 9 1 0 Unmodified _TGISDVFAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.2602 2 469.2531 936.491647 87957.82 -0.015187 -7.1264E-06 0.37128 0.00017422 0.35609 0.0001671 469.253181181872 473.260285186848 69.8 1.5162 69.8 69.376 70.893 0 606 130 7 0 0 0 0.008633 3 40437 60.91 29.681 1 1.0577 1.2147 0 199710000 93145000 106570000 34265 151 12984 13342 53475;53476;53477 53476 TGISDVFAK 9 1 0 Unmodified _TGISDVFAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2605 2 469.2531 936.491647 88118.98 0.17474 8.1999E-05 0.45972 0.00021573 0.63447 0.00029773 469.253214559204 473.260335258088 68.782 1.3338 68.782 68.188 69.522 0 532 110 7 0 0 0 0.0018198 2 40650 80.438 41.476 1 1.089 1.2693 0 254220000 128300000 125920000 34266 151 12984 13342 53478;53479 53479 TGISDVFAK 9 1 0 Unmodified _TGISDVFAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.2605 2 469.2531 936.491647 88316.08 0.1894 8.8875E-05 0.11267 5.287E-05 0.30207 0.00014175 469.253014211581 473.260153865938 79.409 1.1772 79.409 78.934 80.111 0 329 71 7 0 0 0 0.046218 1 42619 39.547 16.118 1 0.52761 0.41059 0 12419000 7969700 4449100 34267 151 12984 13342 53480 53480 TGISDVFAK 9 1 0 Unmodified _TGISDVFAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 469.2538 2 469.2531 936.491647 88208.6 0.18021 8.4562E-05 0.14563 6.8338E-05 0.32584 0.0001529 469.253054036568 473.260212500029 79.645 1.1967 79.645 79.188 80.384 0 329 71 7 0 0 0 0.010772 1 41927 58.981 31.727 1 0.50892 0.41932 0 10699000 6867300 3831400 34268 151 12984 13342 53481 53481 TGLAVTVGQAK 11 1 0 Unmodified _TGLAVTVGQAK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.8116 2 522.806031 1043.59751 83150.3 0.68008 0.00035555 -0.50328 -0.00026312 0.1768 9.2434E-05 522.805914218664 526.812327897358 48.827 0.64384 48.827 48.311 48.955 0 174 49 7 0 0 0 0.00043595 2 26542 78.655 78.655 1 0.94038 1.0634 0 85239000 44067000 41172000 34269 1712;1225 12985 13343 53482;53483 53483 TGLAVTVGQAK 11 1 0 Unmodified _TGLAVTVGQAK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.806 2 522.806031 1043.59751 82461.27 0.07115 3.7198E-05 -0.0031419 -1.6426E-06 0.068008 3.5555E-05 522.806118061702 526.812788779665 47.68 0.9206 47.68 47.269 48.189 -3.8147E-06 220 63 6 0 0 0 0.0004027 3 26427 81.263 81.263 1 0.87865 0.99025 0 124360000 66038000 58321000 34270 1712;1225 12985 13343 53484;53485;53486 53485 TGLAVTVGQAK 11 1 0 Unmodified _TGLAVTVGQAK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.8063 2 522.806031 1043.59751 83265.26 0.3065 0.00016024 -0.26747 -0.00013983 0.039033 2.0407E-05 522.806067175446 526.812607671081 55.782 0.95942 55.782 55.428 56.388 -3.8147E-06 227 60 7 0 0 0 0.0010647 2 28025 70.363 70.363 1 1.9284 1.5401 0 9174700 3132100 6042600 34271 1712;1225 12985 13343 53487;53488 53488 TGLAVTVGQAK 11 1 0 Unmodified _TGLAVTVGQAK_ 0 0 0 E7ETY2;B4DRA2;B4DLB1;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.8058 2 522.806031 1043.59751 84259.95 0.32709 0.000171 -0.78911 -0.00041255 -0.46202 -0.00024155 522.806004823827 526.812205022502 56.135 1.7361 56.135 54.895 56.631 0 316 111 7 0 0 0 0.0004486 1 27574 77.662 77.662 1 2.0154 1.6467 0 8157600 2732900 5424700 34272 1712;1225 12985 13343 53489 53489 TGLFSATQTQEVENLVR 17 0 1 Unmodified _TGLFSATQTQEVENLVR_ 0 0 0 B4DVE4;F5H5U2;A0A024RBS0;Q8NHQ9 B4DVE4 B4DVE4 DDX55 ATP-dependent RNA helicase DDX55 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 946.9635 2 946.989254 1891.96396 62178.44 0.73514 0.00069617 0.7932 0.00075115 1.5283 0.0014473 946.99071849808 951.993434272627 122.06 0.41998 122.06 121.89 122.31 0 71 19 6 0 0 0 0.00017208 3 72728 52.576 44.368 1 1.255 1.0765 0 8456200 3335400 5120800 34273 344 12986 13344 53490;53491;53492 53490 TGLFSATQTQEVENLVR 17 0 1 Unmodified _TGLFSATQTQEVENLVR_ 0 0 0 B4DVE4;F5H5U2;A0A024RBS0;Q8NHQ9 B4DVE4 B4DVE4 DDX55 ATP-dependent RNA helicase DDX55 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 951.9949 2 946.989254 1891.96396 62459.57 0.76389 0.0007234 0.44487 0.00042128 1.2088 0.0011447 947.49069708085 952.495512528607 121.84 0.38644 121.84 121.68 122.07 0 56 16 6 0 0 0 7.8158E-05 2 71685 63.181 57.687 1 1.4619 1.2079 0 8129900 3106800 5023100 34274 344 12986 13344 53493;53494 53494 TGLIDYNQLALTAR 14 0 1 Unmodified _TGLIDYNQLALTAR_ 0 0 0 G3V5L0;G3V2Y4;B4DJ63;B4DLV4;B4DW25;B4DP88;B4E1G2;Q5BJF5;Q5HYG8;B4DJQ3;A0A024RB99;V9HW06;Q53ET4;B4DWA7;P34897 G3V5L0 G3V5L0 SHMT2;DKFZp686P09201;HEL-S-51e Serine hydroxymethyltransferase;Serine hydroxymethyltransferase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.9281 2 774.922655 1547.83076 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.3 1 105.3 104.8 105.8 -7.6294E-06 0 0 0 0.00029426 1 65193 87.363 51.419 1 34275 330 12987 13345 53495 53495 TGLIDYNQLALTAR 14 0 1 Unmodified _TGLIDYNQLALTAR_ 0 0 0 G3V5L0;G3V2Y4;B4DJ63;B4DLV4;B4DW25;B4DP88;B4E1G2;Q5BJF5;Q5HYG8;B4DJQ3;A0A024RB99;V9HW06;Q53ET4;B4DWA7;P34897 G3V5L0 G3V5L0 SHMT2;DKFZp686P09201;HEL-S-51e Serine hydroxymethyltransferase;Serine hydroxymethyltransferase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.9278 2 774.922655 1547.83076 71405.73 0.84937 0.00065819 0.15792 0.00012238 1.0073 0.00078057 774.92300442121 779.926944198727 104.75 0.47735 104.75 104.49 104.97 0 115 36 4 0 0 0 0.00021323 2 66373 67.456 53.949 1 1.7506 1.7698 0 9762300 3737000 6025300 34276 330 12987 13345 53496;53497 53497 TGLIDYNQLALTAR 14 0 1 Unmodified _TGLIDYNQLALTAR_ 0 0 0 G3V5L0;G3V2Y4;B4DJ63;B4DLV4;B4DW25;B4DP88;B4E1G2;Q5BJF5;Q5HYG8;B4DJQ3;A0A024RB99;V9HW06;Q53ET4;B4DWA7;P34897 G3V5L0 G3V5L0 SHMT2;DKFZp686P09201;HEL-S-51e Serine hydroxymethyltransferase;Serine hydroxymethyltransferase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.4249 2 774.922655 1547.83076 69630.44 0.54951 0.00042583 0.25348 0.00019643 0.803 0.00062226 775.424112532232 779.926879802281 116.74 0.33183 116.74 116.56 116.9 0 55 11 6 0 0 0 0.0081308 1 68672 39.219 39.219 1 0.67208 0.56144 0 3308100 1829300 1478700 34277 330 12987 13345 53498 53498 TGLIDYNQLALTAR 14 0 1 Unmodified _TGLIDYNQLALTAR_ 0 0 0 G3V5L0;G3V2Y4;B4DJ63;B4DLV4;B4DW25;B4DP88;B4E1G2;Q5BJF5;Q5HYG8;B4DJQ3;A0A024RB99;V9HW06;Q53ET4;B4DWA7;P34897 G3V5L0 G3V5L0 SHMT2;DKFZp686P09201;HEL-S-51e Serine hydroxymethyltransferase;Serine hydroxymethyltransferase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 779.9269 2 774.922655 1547.83076 70761.62 0.87915 0.00068127 -0.2657 -0.0002059 0.61345 0.00047538 774.922228077478 779.926855541788 116.59 0.44553 116.59 116.37 116.81 0 66 19 6 0 0 0 0.00086228 1 67581 57.802 49.289 1 0.7296 0.62426 0 2864800 1647200 1217600 34278 330 12987 13345 53499 53499 TGLYNYYDDEK 11 1 0 Unmodified _TGLYNYYDDEK_ 0 0 0 E9PKH2;B4DN87;A8K259;A0A024R5K8;P50454;Q9NPA9;E9PR70;E9PPV6 E9PKH2 E9PKH2 SERPINH1;ra-a47 Serpin H1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.8643 2 690.80134 1379.58813 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.137 1 56.137 55.637 56.637 0 0 0 0 0.025366 1 32253 51.092 39.941 1 34279 185 12988 13346 53500 53500 TGLYNYYDDEK 11 1 0 Unmodified _TGLYNYYDDEK_ 0 0 0 E9PKH2;B4DN87;A8K259;A0A024R5K8;P50454;Q9NPA9;E9PR70;E9PPV6 E9PKH2 E9PKH2 SERPINH1;ra-a47 Serpin H1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.8089 2 690.80134 1379.58813 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.173 1 56.173 55.673 56.673 -3.8147E-06 0 0 0 0.024605 1 32279 51.436 39.389 1 34280 185 12988 13346 53501 53501 TGMILLAGEITSR 13 0 1 Oxidation (M) _TGM(ox)ILLAGEITSR_ TGM(1)ILLAGEITSR TGM(86.46)ILLAGEITSR 0 1 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.3781 2 689.373952 1376.73335 72092.17 0.65852 0.00045396 0.20654 0.00014238 0.86506 0.00059635 689.874732742307 694.377959775004 85.303 0.85463 85.303 84.884 85.739 0 212 69 5 0 0 0 7.6596E-05 1 52383 86.463 61.608 1 3.4158 3.4241 0 18056000 4828600 13228000 34281 606 12989 13347 53502 53502 459 TGNFISTSTSLPR 13 0 1 Unmodified _TGNFISTSTSLPR_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.8609 2 690.859523 1379.70449 72220.38 0.77723 0.00053696 -0.24062 -0.00016624 0.53661 0.00037072 690.859318069811 695.863464686512 75.324 0.83424 75.324 74.957 75.791 7.6294E-06 396 69 7 0 0 0 0.00013996 2 44119 88.155 78.5 1 0.91049 1.0686 0 220700000 118930000 101770000 34282 876 12990 13348 53503;53504 53504 TGNFISTSTSLPR 13 0 1 Unmodified _TGNFISTSTSLPR_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.8626 2 690.859523 1379.70449 72718.56 0.69211 0.00047815 -0.36257 -0.00025048 0.32954 0.00022767 690.859373787575 695.863439384883 74.237 0.81908 74.237 73.863 74.682 0 418 69 8 0 0 0 4.4227E-06 2 44480 107.11 94.537 1 0.93874 1.0764 0 178110000 97902000 80212000 34283 876 12990 13348 53505;53506 53505 TGNFISTSTSLPR 13 0 1 Unmodified _TGNFISTSTSLPR_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 695.8638 2 690.859523 1379.70449 72529.09 0.41323 0.00028548 0.11854 8.1895E-05 0.53177 0.00036738 690.859622755794 695.863772951456 86.282 1.0802 86.282 85.854 86.935 0 400 71 9 0 0 0 0.0003585 2 47167 62.799 53.367 1 1.3821 1.1762 0 35209000 14184000 21025000 34284 876 12990 13348 53507;53508 53507 TGNFISTSTSLPR 13 0 1 Unmodified _TGNFISTSTSLPR_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 695.8638 2 690.859523 1379.70449 72149.55 0.51533 0.00035602 -0.043412 -2.9991E-05 0.47192 0.00032603 690.85946177769 695.863604938373 86.431 1.0859 86.431 85.984 87.069 0 324 65 8 0 0 0 0.00015323 2 46472 88.155 71.13 1 1.3621 1.1881 0 33461000 13844000 19617000 34285 876 12990 13348 53509;53510 53510 TGNFQVTELGR 11 0 1 Unmodified _TGNFQVTELGR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.8165 2 611.314751 1220.61495 76517.48 0.40718 0.00024892 0.67952 0.0004154 1.0867 0.00066431 611.315187329061 616.319082151424 65.434 0.91293 65.434 64.978 65.891 -7.6294E-06 441 81 8 0 0 0 0.00044756 3 37541 77.744 66.233 1 0.77778 0.86346 0 70048000 38998000 31049000 34286 1411 12991 13349 53511;53512;53513 53513 TGNFQVTELGR 11 0 1 Unmodified _TGNFQVTELGR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3149 2 611.314751 1220.61495 76491.91 0.35987 0.00021999 0.68461 0.00041851 1.0445 0.0006385 611.315227992302 616.31915062105 64.291 0.96904 64.291 63.818 64.787 -7.6294E-06 442 90 7 0 0 0 0.00012222 2 37758 96.171 85.94 1 0.79502 0.92065 0 67090000 35837000 31253000 34287 1411 12991 13349 53514;53515 53515 TGNFQVTELGR 11 0 1 Unmodified _TGNFQVTELGR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.3152 2 611.314751 1220.61495 75659.31 0.33924 0.00020738 0.74217 0.0004537 1.0814 0.00066108 611.315183176692 616.319216183651 75.554 0.74663 75.554 75.189 75.935 0 235 53 6 0 0 0 0.062065 1 39404 33.039 33.039 1 0.74522 0.65869 0 3762600 1851200 1911400 34288 1411 12991 13349 53516 53516 TGNILQDLQPFLVK 14 1 0 Unmodified _TGNILQDLQPFLVK_ 0 0 0 Q14191;Q59F09 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.4573 2 793.451048 1584.88754 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.75 1 128.75 128.25 129.25 0 0 0 0 1.7671E-69 1 86036 185.3 157.12 1 34289 1728 12992 13350 53517 53517 TGNIPALVR 9 0 1 Unmodified _TGNIPALVR_ 0 0 0 B4DUC5;P55060;B4DPS6;B4DM31;B4DS32 B4DUC5 B4DUC5 CSE1L Exportin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.7866 2 470.782359 939.550165 89404.8 0.15043 7.0819E-05 -0.37126 -0.00017478 -0.22084 -0.00010397 470.781850439589 475.786364780195 59.949 0.47293 59.949 59.679 60.152 0 112 37 4 0 0 0 0.0042156 1 34880 69.825 44.088 1 2.4368 2.3954 0 13514000 3452100 10062000 34290 1037 12993 13351 53518 53518 TGPAAAQVQVGK 12 1 0 Unmodified _TGPAAAQVQVGK_ 0 0 0 E7ETY2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.8221 2 563.814387 1125.61422 82142.94 0.21503 0.00012123 0.040008 2.2557E-05 0.25503 0.00014379 563.814114447568 567.821483452431 29.177 0.25768 29.177 29.048 29.305 0 70 15 6 0 0 0 2.1706E-29 1 14023 169.41 151.18 1 0.8141 0.89723 0 55753000 29475000 26279000 34291 1712;1225 12994 13352 53519 53519 TGPAAAQVQVGK 12 1 0 Unmodified _TGPAAAQVQVGK_ 0 0 0 E7ETY2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.8221 2 563.814387 1125.61422 83661.68 0.74509 0.00042009 0.1317 7.4252E-05 0.87678 0.00049434 563.813793864435 567.821834125694 28.487 0.53135 28.487 28.328 28.859 0 185 49 6 0 0 0 1.9678E-05 1 13577 103.55 95.326 1 0.85925 0.90368 0 35025000 17754000 17271000 34292 1712;1225 12994 13352 53520 53520 TGPLSAQPSVEK 12 1 0 Unmodified _TGPLSAQPSVEK_ 0 0 0 Q71F23;Q09GN1;A5D8X7;D6R9S4 Q71F23 Q71F23 CENPU;MLF1IP Centromere protein U ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3317 2 607.324785 1212.63502 NaN NaN NaN 0.13809 8.3865E-05 NaN NaN NaN NaN 38.287 0.4612 38.287 38.191 38.652 0 0 0 0 0.0089727 1 20072 55.721 36.458 1 NaN NaN 0 5566700 0 5566700 34293 1866 12995 13353 53521 53521 TGQAAELGGLLK 12 1 0 Unmodified _TGQAAELGGLLK_ 0 0 0 O00231;J3QRY4;B4DTS5 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.3389 2 579.32987 1156.64519 NaN NaN NaN -0.060165 -3.4855E-05 NaN NaN NaN NaN 80.238 0.50745 80.238 79.999 80.506 0 0 0 0 0.011921 1 47638 54.198 54.198 1 NaN NaN 0 12083000 0 12083000 34294 1360 12996 13354 53522 53522 TGQAAELGGLLK 12 1 0 Unmodified _TGQAAELGGLLK_ 0 0 0 O00231;J3QRY4;B4DTS5 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.3378 2 579.32987 1156.64519 78963.91 0.66933 0.00038776 -0.51847 -0.00030037 0.15086 8.7398E-05 579.328694375635 583.337231438645 79.126 0.54041 79.126 78.857 79.397 0 165 48 5 0 0 0 4.9915E-06 1 48018 110.39 91.409 1 1.3949 1.5069 0 21896000 10960000 10935000 34295 1360 12996 13354 53523 53523 TGQALCSLQCYR 12 0 1 Unmodified _TGQALCSLQCYR_ 0 0 0 J3KQ70;B4DJ31;Q9C086;B4DJ22 J3KQ70 J3KQ70 INO80B-WBP1;INO80B INO80 complex subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.8379 2 728.83721 1455.65987 73384.58 0.71204 0.00051896 -0.75394 -0.0005495 -0.041897 -3.0536E-05 728.836028199773 733.841693610231 58.098 0.50309 58.098 57.822 58.325 0 86 39 4 0 0 0 0.016404 1 32875 42.21 38.193 1 0.50963 0.5178 0 7477400 5162400 2315100 34296 985 12997 13355 53524 53524 TGQALCSLQCYR 12 0 1 Unmodified _TGQALCSLQCYR_ 0 0 0 J3KQ70;B4DJ31;Q9C086;B4DJ22 J3KQ70 J3KQ70 INO80B-WBP1;INO80B INO80 complex subunit B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.8417 2 728.83721 1455.65987 71603.63 0.61045 0.00044492 -0.92792 -0.0006763 -0.31747 -0.00023138 728.836362579512 733.841391897916 68.046 0.45218 68.046 67.849 68.301 0 127 30 8 0 0 0 0.0041623 1 35472 54.198 53.421 1 1.2816 1.1132 0 2229300 876610 1352700 34297 985 12997 13355 53525 53525 TGQEVVFVAEPDNK 14 1 0 Unmodified _TGQEVVFVAEPDNK_ 0 0 0 B2RE46;P04844;B4DJL0 B2RE46 B2RE46 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.8807 2 766.883195 1531.75184 69895.4 0.71328 0.000547 -1.7974 -0.0013784 -1.0841 -0.00083137 766.881187045673 770.889754299382 69.236 0.43967 69.236 69.037 69.477 0 69 36 3 0 0 0 0.0029829 1 40152 47.915 45.401 1 0.63736 0.62628 0 8721800 5632900 3088900 34298 894 12998 13356 53526 53526 TGQEYKPGNPPAEIGQNISSNSSASILESK 30 2 0 Unmodified _TGQEYKPGNPPAEIGQNISSNSSASILESK_ 0 0 1 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1040.855 3 1035.17746 3102.51055 59993.71 0.58795 0.00060863 0.063127 6.5348E-05 0.65108 0.00067398 1035.51159081097 1040.85455914907 83.033 0.57134 83.033 82.761 83.333 0 308 49 9 0 0 0 5.9434E-67 5 49682 152.15 152.15 1 2.5297 2.987 0 39351000 10489000 28862000 34299 1454 12999 13357 53527;53528;53529;53530;53531 53531 TGQEYKPGNPPAEIGQNISSNSSASILESK 30 2 0 Unmodified _TGQEYKPGNPPAEIGQNISSNSSASILESK_ 0 0 1 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1040.5206 3 1035.17746 3102.51055 59845.49 0.27526 0.00028495 0.075858 7.8527E-05 0.35112 0.00036347 1035.51209929135 1040.85485458602 82.137 0.54283 82.137 81.879 82.421 0 338 48 9 0 0 0 2.115E-16 4 50137 66.98 66.98 1 2.3956 2.7746 0 54658000 16059000 38599000 34300 1454 12999 13357 53532;53533;53534;53535 53533 TGQEYKPGNPPAEIGQNISSNSSASILESK 30 2 0 Unmodified _TGQEYKPGNPPAEIGQNISSNSSASILESK_ 0 0 1 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1035.5131 3 1035.17746 3102.51055 59869.47 0.52718 0.00054573 0.20993 0.00021732 0.73711 0.00076304 1035.84592633415 1040.85441420407 95.647 0.59133 95.647 95.371 95.962 0 317 40 11 0 0 0 0.0002263 1 53551 32.798 32.798 1 1.2575 1.0755 0 11038000 5338700 5699600 34301 1454 12999 13357 53536 53536 TGQLFLK 7 1 0 Unmodified _TGQLFLK_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 403.742 2 403.742171 805.469789 95494.91 0.074543 3.0096E-05 -0.48044 -0.00019397 -0.4059 -0.00016388 403.741809309738 407.749071500809 54.245 0.5484 54.245 53.998 54.546 0 140 44 7 0 0 0 0.026992 2 30394 84.699 51.206 1 0.82642 0.89765 0 46618000 25408000 21211000 34302 1854 13000 13358 53537;53538 53538 TGQLFLK 7 1 0 Unmodified _TGQLFLK_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 407.7496 2 403.742171 805.469789 96306.08 -0.029916 -1.2078E-05 -0.84288 -0.00034031 -0.87279 -0.00035238 403.741614732674 407.749115584249 52.79 0.73088 52.79 52.375 53.106 0 186 58 6 0 0 0 0.024839 2 30080 89.673 57.182 1 0.86028 0.96715 0 72892000 42573000 30319000 34303 1854 13000 13358 53539;53540 53539 TGQPEELVSCSDCGR 15 0 1 Unmodified _TGQPEELVSCSDCGR_ 0 0 0 A0A024R582;J3KMZ8;Q92785 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.861 2 847.859068 1693.70358 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.585 1 43.585 43.085 44.085 0 0 0 0 0.02592 1 23320 42.843 32.889 1 34304 174 13001 13359 53541 53541 TGQPEELVSCSDCGR 15 0 1 Unmodified _TGQPEELVSCSDCGR_ 0 0 0 A0A024R582;J3KMZ8;Q92785 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.867 2 847.859068 1693.70358 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.843 1 42.843 42.343 43.343 0 0 0 0 0.0087206 1 23166 49.31 43.206 1 34305 174 13001 13359 53542 53542 TGQPEELVSCSDCGR 15 0 1 Unmodified _TGQPEELVSCSDCGR_ 0 0 0 A0A024R582;J3KMZ8;Q92785 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 852.8657 2 847.859068 1693.70358 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.898 1 42.898 42.398 43.398 0 0 0 0 0.034262 1 23208 41.621 32.667 1 34306 174 13001 13359 53543 53543 TGQPEELVSCSDCGR 15 0 1 Unmodified _TGQPEELVSCSDCGR_ 0 0 0 A0A024R582;J3KMZ8;Q92785 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 848.3597 2 847.859068 1693.70358 66180.55 0.36916 0.000313 0.096891 8.215E-05 0.46605 0.00039515 847.858787806041 852.863788312483 51.173 0.50068 51.173 50.961 51.461 0 113 32 5 0 0 0 0.047206 1 24557 23.711 23.711 1 1.5801 1.3734 0 1570000 702410 867600 34307 174 13001 13359 53544 53544 TGQPMINLYTDR 12 0 1 Oxidation (M) _TGQPM(ox)INLYTDR_ TGQPM(1)INLYTDR TGQPM(55.31)INLYTDR 0 1 0 Q70T18;Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637 Q70T18 Q70T18 FUS RNA-binding protein FUS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.8483 2 712.845558 1423.67656 73168.08 0.44715 0.00031875 -0.55981 -0.00039906 -0.11266 -8.031E-05 713.34793599476 717.848559004026 64.878 0.52189 64.878 64.583 65.105 0 134 46 5 0 0 0 0.0018042 1 37232 55.314 49.833 1 1.881 1.9477 0 10341000 4255400 6085300 34308 734 13002 13360 53545 53545 571 TGQPMINLYTDR 12 0 1 Oxidation (M) _TGQPM(ox)INLYTDR_ TGQPM(1)INLYTDR TGQPM(48.44)INLYTDR 0 1 0 Q70T18;Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637 Q70T18 Q70T18 FUS RNA-binding protein FUS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.3513 2 712.845558 1423.67656 73733.32 0.56105 0.00039994 -0.16122 -0.00011493 0.39982 0.00028501 712.845522611981 717.849403998113 63.698 0.45421 63.698 63.485 63.939 0 145 41 5 0 0 0 0.003661 1 37382 48.44 37.917 1 2.5691 2.5555 0 11807000 3644400 8162900 34309 734 13002 13360 53546 53546 571 TGSQYDIQDAIDK 13 1 0 Unmodified _TGSQYDIQDAIDK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.8523 2 727.343903 1452.67325 NaN NaN NaN 0.1503 0.00010932 NaN NaN NaN NaN 64.73 0.4521 64.73 64.419 64.872 0 0 0 0 0.00024023 2 38048 88.596 73.445 1 NaN NaN 0 4800900 0 4800900 34310 1486 13003 13361 53547;53548 53547 TGSVTTTYCCNQDHCNK 17 1 0 Unmodified _TGSVTTTYCCNQDHCNK_ 0 0 0 F8VRH6;F8VVC4;H0YHS4;F8W0K6;F8W1R9;B4DY26;B4DXN7;Q5T7S2;P36897;F8VXZ5 F8VRH6 F8VRH6 TGFBR1 Receptor protein serine/threonine kinase;TGF-beta receptor type-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.6161 3 682.608512 2044.80371 NaN NaN NaN 0.95189 0.00064977 NaN NaN NaN NaN 19.25 0.1718 19.25 19.164 19.336 -1.9073E-06 0 0 0 0.0015989 1 5750 50.079 48.508 1 NaN NaN 0 2340400 0 2340400 34311 1048 13004 13362 53549 53549 TGSVTTTYCCNQDHCNK 17 1 0 Unmodified _TGSVTTTYCCNQDHCNK_ 0 0 0 F8VRH6;F8VVC4;H0YHS4;F8W0K6;F8W1R9;B4DY26;B4DXN7;Q5T7S2;P36897;F8VXZ5 F8VRH6 F8VRH6 TGFBR1 Receptor protein serine/threonine kinase;TGF-beta receptor type-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.6132 3 682.608512 2044.80371 76858.62 0.15654 0.00010686 0.23561 0.00016083 0.39215 0.00026769 682.609032969267 685.614435117831 21.046 0.20298 21.046 20.934 21.137 0 66 16 7 0 0 0 0.0051213 1 6200 27.496 27.496 1 1.272 1.0712 0 1574500 837130 737360 34312 1048 13004 13362 53550 53550 TGSYGALAEITASK 14 1 0 Unmodified _TGSYGALAEITASK_ 0 0 0 F8VZN8;A0A024RBF1;B2RAH5;O14974;H0YIS4;H0YHI8 F8VZN8 F8VZN8 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8612 2 684.853906 1367.69326 NaN NaN NaN -0.30624 -0.00020973 NaN NaN NaN NaN 76.425 0.39043 76.425 76.219 76.609 0 0 0 0 0.00091135 1 46127 75.479 54.701 1 NaN NaN 0 6306700 0 6306700 34313 336 13005 13363 53551 53551 TGTAEMSSILEER 13 0 1 Oxidation (M) _TGTAEM(ox)SSILEER_ TGTAEM(1)SSILEER TGTAEM(84.51)SSILEER 0 1 0 V9HW26;P25705;K7ERX7;K7ESA0 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.3442 2 720.337763 1438.66097 NaN NaN NaN -0.84688 -0.00061004 NaN NaN NaN NaN 46.559 0.46564 46.559 46.261 46.727 3.8147E-06 0 0 0 0.0001385 1 25200 84.507 66.643 1 NaN NaN 0 6214900 0 6214900 34314 1518 13006 13364 53552 53552 1285 TGTAYTFFTPNNIK 14 1 0 Unmodified _TGTAYTFFTPNNIK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.9049 2 787.896106 1573.77766 68809.98 0.73648 0.00058027 0.36122 0.0002846 1.0977 0.00086487 787.896765888012 791.903363829278 95.048 0.87502 95.048 94.732 95.607 0 312 68 6 0 0 0 2.1413E-06 3 57793 106.37 106.37 1 1.3751 1.4805 0 33432000 15265000 18168000 34315 1009 13007 13365 53553;53554;53555 53554 TGTAYTFFTPNNIK 14 1 0 Unmodified _TGTAYTFFTPNNIK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.9039 2 787.896106 1573.77766 NaN NaN NaN -1.8616 -0.0014668 NaN NaN NaN NaN 94.311 0.80756 94.311 93.917 94.725 0 0 0 0 0.0053693 1 58736 55.401 40.981 1 NaN NaN 0 23704000 0 23704000 34316 1009 13007 13365 53556 53556 TGTAYTFFTPNNIK 14 1 0 Unmodified _TGTAYTFFTPNNIK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.4045 2 787.896106 1573.77766 68009.37 0.76478 0.00060257 -0.0087087 -6.8615E-06 0.75607 0.0005957 787.896366454201 791.903345302735 108.49 0.69554 108.49 108.18 108.88 0 193 33 8 0 0 0 9.3573E-06 2 62272 99.283 99.283 1 1.2137 0.94843 0 11890000 5468700 6420900 34317 1009 13007 13365 53557;53558 53558 TGTAYTFFTPNNIK 14 1 0 Unmodified _TGTAYTFFTPNNIK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;B4DNG2 B4DN41 B4DN41 DDX5 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.8965 2 787.896106 1573.77766 68604.03 0.69045 0.000544 0.26246 0.00020679 0.95291 0.00075079 787.896310719473 791.903373959523 108.34 0.65154 108.34 108.08 108.73 0 124 32 5 0 0 0 0.0015013 1 61306 53.237 53.237 1 1.135 0.93235 0 9525600 5219700 4305900 34318 1009 13007 13365 53559 53559 TGTITTFEHAHNMR 14 0 1 Oxidation (M) _TGTITTFEHAHNM(ox)R_ TGTITTFEHAHNM(1)R TGTITTFEHAHNM(78.4)R 0 1 0 P13639;Q8TA90;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.2615 3 544.591339 1630.75219 81545.7 0.29619 0.0001613 -0.034312 -1.8686E-05 0.26188 0.00014262 544.590985992954 547.927245037186 24.781 0.54198 24.781 24.508 25.05 0 96 26 6 0 0 0 3.556E-05 1 10419 78.401 67.916 1 4.8433 4.966 0 25912000 3698700 22214000 34319 1478 13008 13366 53560 53560 1231 TGTITTFEHAHNMR 14 0 1 Oxidation (M) _TGTITTFEHAHNM(ox)R_ TGTITTFEHAHNM(1)R TGTITTFEHAHNM(59.54)R 0 1 0 P13639;Q8TA90;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.387 2 816.383371 1630.75219 NaN NaN NaN -0.20842 -0.00017015 NaN NaN NaN NaN 24.792 0.19894 24.792 24.668 24.867 0 0 0 0 0.0013041 1 10529 59.542 43.288 1 NaN NaN 0 4474900 0 4474900 34320 1478 13008 13366 53561 53561 1231 TGTITTFEHAHNMR 14 0 1 Oxidation (M) _TGTITTFEHAHNM(ox)R_ TGTITTFEHAHNM(1)R TGTITTFEHAHNM(96.46)R 0 1 0 P13639;Q8TA90;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.9281 3 544.591339 1630.75219 81348.45 -0.054979 -2.9941E-05 0.505 0.00027502 0.45002 0.00024508 544.591443607234 547.9276577869 23.859 0.4266 23.859 23.701 24.127 0 69 16 7 0 0 0 7.0536E-06 1 9635 96.464 77.631 1 4.9129 5.5092 0 45389000 8258600 37130000 34321 1478 13008 13366 53562 53562 1231 TGTIVVEGHELHDEDIR 17 0 1 Unmodified _TGTIVVEGHELHDEDIR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;B4DVX2;Q7L4K8;Q9P1N9 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.3249 3 640.653433 1918.93847 76472.54 0.53735 0.00034426 0.3274 0.00020975 0.86475 0.00055401 640.987870553312 644.3243796633 64.7 0.45814 64.7 64.421 64.879 0 117 30 7 0 0 0 0.0058428 1 33351 25.988 20.884 1 0.86027 0.74023 0 2679100 1476100 1202900 34322 1561 13009 13367 53563 53563 TGTLQPWNSDSTLNSR 16 0 1 Unmodified _TGTLQPWNSDSTLNSR_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;H0YIK5 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 888.9297 2 888.929197 1775.84384 NaN NaN NaN 0.11221 9.9744E-05 NaN NaN NaN NaN 71.179 0.24838 71.179 71.016 71.264 0 0 0 0 0.00071287 3 42585 66.267 41.923 1 NaN NaN 0 3437600 3437600 0 34323 68 13010 13368 53564;53565;53566 53565 TGTLQPWNSDSTLNSR 16 0 1 Unmodified _TGTLQPWNSDSTLNSR_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;H0YIK5 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.9337 2 888.929197 1775.84384 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.06 1 71.06 70.56 71.56 7.6294E-06 0 0 0 0.0059683 1 42533 50.786 15.245 1 34324 68 13010 13368 53567 53567 TGTLQPWNSDSTLNSR 16 0 1 Unmodified _TGTLQPWNSDSTLNSR_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;F8VRD2;H0YIK5 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 893.9338 2 888.929197 1775.84384 64586.95 0.17865 0.00015881 0.066251 5.8892E-05 0.2449 0.0002177 888.929255112568 893.933510098015 82.848 0.5873 82.848 82.598 83.185 0 177 34 7 0 0 0 0.0032483 2 44283 37.426 37.426 1 1.9484 1.6678 0 3293300 1083000 2210400 34325 68 13010 13368 53568;53569 53569 TGTLTTNQMSVCR 13 0 1 Oxidation (M) _TGTLTTNQM(ox)SVCR_ TGTLTTNQM(1)SVCR TGTLTTNQM(48)SVCR 0 1 0 A0A0S2Z3L2;P16615;H7C5W9;A8K9K1;Q93084 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.8492 2 742.845232 1483.67591 NaN NaN NaN -0.55752 -0.00041415 NaN NaN NaN NaN 25.948 0.18397 25.948 25.82 26.004 0 0 0 0 0.0061911 1 11467 48.004 35.048 1 NaN NaN 0 3266200 0 3266200 34326 554 13011 13369 53570 53570 409 TGTLVEEAFWIDK 13 1 0 Unmodified _TGTLVEEAFWIDK_ 0 0 0 G3V3B0;Q69YJ6;S4R3H4;E7EQT4;Q9UKV3;B4DQZ7 G3V3B0 G3V3B0 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.386 2 754.885207 1507.75586 70470.77 0.88757 0.00067001 1.5138 0.0011427 2.4013 0.0018127 754.884861357502 758.892434416316 113.45 0.6522 113.45 113.18 113.83 0 221 48 7 0 0 0 8.5266E-06 4 71809 101.93 77.585 1 1.0021 1.0144 0 10166000 4396800 5768800 34327 1220 13012 13370 53571;53572;53573;53574 53574 TGTLVEEAFWIDK 13 1 0 Unmodified _TGTLVEEAFWIDK_ 0 0 0 G3V3B0;Q69YJ6;S4R3H4;E7EQT4;Q9UKV3;B4DQZ7 G3V3B0 G3V3B0 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.8925 2 754.885207 1507.75586 70370.67 0.65512 0.00049454 0.32332 0.00024407 0.97844 0.00073861 755.386970257184 758.892341550718 112.85 0.58513 112.85 112.6 113.18 7.6294E-06 135 38 5 0 0 0 5.1368E-09 2 73123 120.06 120.06 1 0.94969 0.95586 0 13500000 6890800 6608900 34328 1220 13012 13370 53575;53576 53576 TGTLVEEAFWIDK 13 1 0 Unmodified _TGTLVEEAFWIDK_ 0 0 0 G3V3B0;Q69YJ6;S4R3H4;E7EQT4;Q9UKV3;B4DQZ7 G3V3B0 G3V3B0 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.8851 2 754.885207 1507.75586 71507.78 0.72203 0.00054505 0.2376 0.00017936 0.95963 0.00072441 754.885308703879 759.393934550037 124.45 0.4727 124.45 124.28 124.75 7.6294E-06 61 21 6 0 0 0 0.054701 1 73696 28.232 24.587 1 0.638 0.52784 0 1824600 746960 1077600 34329 1220 13012 13370 53577 53577 TGTSCALDCGAGIGR 15 0 1 Unmodified _TGTSCALDCGAGIGR_ 0 0 0 A0A024R8E4;Q9BV86 A0A024R8E4 A0A024R8E4 C9orf32;NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.3397 2 748.335032 1494.65551 70259.5 0.27085 0.00020269 0.39547 0.00029595 0.66632 0.00049863 748.335498640596 753.339720499325 45.753 0.47239 45.753 45.518 45.991 0 116 38 5 0 0 0 0.00022504 1 24623 71.555 68.703 1 1.8646 1.9163 0 19499000 7461200 12038000 34330 248 13013 13371 53578 53578 TGTSCALDCGAGIGR 15 0 1 Unmodified _TGTSCALDCGAGIGR_ 0 0 0 A0A024R8E4;Q9BV86 A0A024R8E4 A0A024R8E4 C9orf32;NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.3401 2 748.335032 1494.65551 70154.98 0.74091 0.00055445 0.035673 2.6696E-05 0.77658 0.00058114 748.837004215439 753.339361075557 44.824 0.46225 44.824 44.544 45.006 3.8147E-06 107 35 5 0 0 0 0.00022567 1 24559 72.531 64.606 1 1.8935 1.8928 0 16916000 5907100 11009000 34331 248 13013 13371 53579 53579 TGTSCALDCGAGIGR 15 0 1 Unmodified _TGTSCALDCGAGIGR_ 0 0 0 A0A024R8E4;Q9BV86 A0A024R8E4 A0A024R8E4 C9orf32;NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.3374 2 748.335032 1494.65551 71630.24 0.37015 0.00027699 0.47669 0.00035672 0.84684 0.00063372 748.335633231934 753.340036089594 53.501 0.45406 53.501 53.343 53.798 -3.8147E-06 110 33 5 0 0 0 0.023716 1 25981 29.805 27.015 1 1.834 1.5929 0 1785800 584210 1201600 34332 248 13013 13371 53580 53580 TGVCISCDAGMCR 13 0 1 Oxidation (M) _TGVCISCDAGM(ox)CR_ TGVCISCDAGM(1)CR TGVCISCDAGM(54.78)CR 0 1 0 A0A0U1RRH6;O94880;B4DG57 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.7964 2 751.796371 1501.57819 NaN NaN NaN -0.034606 -2.6017E-05 NaN NaN NaN NaN 36.141 0.28721 36.141 35.955 36.242 0 0 0 0 0.0021347 1 18457 54.784 52.051 1 NaN NaN 0 4617300 4617300 0 34333 590 13014 13372 53581 53581 446 TGVHHYSGNNIELGTACGK 19 1 0 Unmodified _TGVHHYSGNNIELGTACGK_ 0 0 0 E5RI99;A0A024R9D3;P62888;A0A0B4J213 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.9894 3 672.318167 2013.93267 73538.21 1.0786 0.00072513 -0.65999 -0.00044372 0.41856 0.00028141 672.318150944681 675.3230149065 32.163 0.66131 32.163 31.957 32.618 0 302 60 9 0 0 0 3.7114E-09 1 15906 73.11 73.11 1 0.583 0.6331 0 46357000 27053000 19304000 34334 276 13015 13373 53582 53582 TGVHHYSGNNIELGTACGK 19 1 0 Unmodified _TGVHHYSGNNIELGTACGK_ 0 0 0 E5RI99;A0A024R9D3;P62888;A0A0B4J213 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.9892 3 672.318167 2013.93267 74680.01 0.36267 0.00024383 -0.58677 -0.0003945 -0.22411 -0.00015067 672.652338104854 674.989158262056 35.799 0.38854 35.799 35.634 36.022 0 122 29 5 0 0 0 4.6976E-06 1 15950 49.865 49.865 1 0.74933 0.61396 0 2516800 1345800 1171000 34335 276 13015 13373 53583 53583 TGVTSTSDSEEEGDDQEGEK 20 1 0 Unmodified _TGVTSTSDSEEEGDDQEGEK_ 0 0 0 O75475 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1050.422 2 1050.42219 2098.82983 60616.61 0.041941 4.4056E-05 0.39633 0.00041632 0.43828 0.00046038 1050.42280350576 1054.93086427427 19.346 0.34306 19.346 19.164 19.507 0 60 12 7 0 0 0 5.1916E-13 3 5769 107.74 107.74 1 0.83748 0.84577 0 8326500 4483900 3842600 34336 1405 13016 13374 53584;53585;53586 53586 TGVTSTSDSEEEGDDQEGEKK 21 2 0 Unmodified _TGVTSTSDSEEEGDDQEGEKK_ 0 0 1 O75475 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.6512 3 743.315539 2226.92479 71019.75 0.6415 0.00047684 -0.23244 -0.00017278 0.40905 0.00030406 743.315406774947 748.658135950713 15.854 0.1811 15.854 15.763 15.944 0 33 9 6 0 0 0 1.5935E-06 1 3384 48.968 48.968 1 1.2203 1.3517 0 4641400 1870300 2771100 34337 1405 13017 13375 53587 53587 TGVTSTSDSEEEGDDQEGEKK 21 2 0 Unmodified _TGVTSTSDSEEEGDDQEGEKK_ 0 0 1 O75475 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.9945 3 743.315539 2226.92479 70830.2 0.22634 0.00016824 0.44963 0.00033422 0.67597 0.00050246 743.315052217125 748.992814128617 15.48 0.38522 15.48 15.278 15.663 0 102 23 6 0 0 0 0.0010115 2 3083 28.891 28.891 1 0.8986 1.0374 0 2185400 973870 1211600 34338 1405 13017 13375 53588;53589 53589 TGVTSTSDSEEEGDDQEGEKK 21 2 0 Unmodified _TGVTSTSDSEEEGDDQEGEKK_ 0 0 1 O75475 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 748.6593 3 743.315539 2226.92479 71052.97 0.46427 0.0003451 0.25833 0.00019202 0.7226 0.00053712 743.650307502976 748.658441406011 17.261 0.24312 17.261 17.131 17.374 1.9073E-06 56 10 8 0 0 0 0.0012041 1 3727 27.32 27.32 1 1.5771 1.4042 0 1569800 588450 981370 34339 1405 13017 13375 53590 53590 TGVTSTSDSEEEGDDQEGEKK 21 2 0 Unmodified _TGVTSTSDSEEEGDDQEGEKK_ 0 0 1 O75475 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.6592 3 743.315539 2226.92479 71185.16 0.18158 0.00013497 0.2801 0.0002082 0.46168 0.00034318 743.315919565203 748.658593392741 17.448 0.2193 17.448 17.343 17.563 0 67 14 8 0 0 0 0.037091 1 3470 11.46 11.46 1 1.4416 1.2529 0 1234300 532110 702180 34340 1405 13017 13375 53591 53591 TGVVPQLVK 9 1 0 Unmodified _TGVVPQLVK_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.7951 2 470.794935 939.575317 87383.05 0.11804 5.5573E-05 0.18994 8.9422E-05 0.30798 0.000145 470.794916792124 474.802051256235 68.71 1.0599 68.71 68.195 69.254 0 364 92 5 0 0 0 0.0020795 2 39641 77.058 59.022 1 1.0989 1.1906 0 43970000 22034000 21936000 34341 769 13018 13376 53592;53593 53593 TGVVPQLVK 9 1 0 Unmodified _TGVVPQLVK_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.7947 2 470.794935 939.575317 87722.98 0.19838 9.3395E-05 0.18176 8.5572E-05 0.38014 0.00017897 470.794892948198 474.802085894073 67.414 1.0211 67.414 66.925 67.946 0 355 86 6 0 0 0 0.001453 2 39722 85.212 67.176 1 1.0939 1.228 0 55461000 27366000 28095000 34342 769 13018 13376 53594;53595 53595 TGVVPQLVK 9 1 0 Unmodified _TGVVPQLVK_ 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 474.8019 2 470.794935 939.575317 87995.23 0.30023 0.00014135 0.022331 1.0513E-05 0.32256 0.00015186 470.794830559234 474.801957670864 78.651 1.1127 78.651 78.277 79.39 0 293 70 6 0 0 0 0.033971 2 41267 44.447 39.357 1 0.62121 0.50545 0 7024700 4043200 2981500 34343 769 13018 13376 53596;53597 53597 TGYTLDVTTGQR 12 0 1 Unmodified _TGYTLDVTTGQR_ 0 0 0 B2R7W4;O43390;Q0VGD6;Q6MZS5;B4DMD1;Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645;F6UXX1 B2R7W4;Q05CK9 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.3306 2 656.330598 1310.64664 73408.47 0.74374 0.00048814 0.49894 0.00032747 1.2427 0.00081561 656.330208396533 661.334808102083 57.664 1.0177 57.664 57.261 58.278 -3.8147E-06 378 79 7 0 0 0 0.00018123 2 32544 83.862 71.05 1 1.4913 1.5997 0 46356000 18877000 27479000 34344 855;864 13019 13377 53598;53599 53599 TGYTLDVTTGQR 12 0 1 Unmodified _TGYTLDVTTGQR_ 0 0 0 B2R7W4;O43390;Q0VGD6;Q6MZS5;B4DMD1;Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645;F6UXX1 B2R7W4;Q05CK9 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.3351 2 656.330598 1310.64664 73562.08 0.70364 0.00046182 -0.056958 -3.7383E-05 0.64669 0.00042444 656.330411607169 661.334881935436 56.911 0.97622 56.911 56.499 57.475 0 295 74 6 0 0 0 4.9568E-23 2 32704 159.83 129.26 1 1.4433 1.6768 0 59362000 26069000 33293000 34345 855;864 13019 13377 53600;53601 53601 TGYTLDVTTGQR 12 0 1 Unmodified _TGYTLDVTTGQR_ 0 0 0 B2R7W4;O43390;Q0VGD6;Q6MZS5;B4DMD1;Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645;F6UXX1 B2R7W4;Q05CK9 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.3355 2 656.330598 1310.64664 74466.86 0.71184 0.0004672 -0.67954 -0.000446 0.032302 2.1201E-05 656.329949051873 661.334641409445 67.198 0.74206 67.198 66.78 67.522 0 244 53 7 0 0 0 0.0010171 2 34969 62.408 55.027 1 1.0566 0.90606 0 6198300 3077600 3120700 34346 855;864 13019 13377 53602;53603 53603 TGYTLDVTTGQR 12 0 1 Unmodified _TGYTLDVTTGQR_ 0 0 0 B2R7W4;O43390;Q0VGD6;Q6MZS5;B4DMD1;Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645;F6UXX1 B2R7W4;Q05CK9 B2R7W4 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.3311 2 656.330598 1310.64664 73713.02 0.51027 0.00033491 -0.55839 -0.00036649 -0.04812 -3.1582E-05 656.329969083249 661.334591782776 67.797 0.69654 67.797 67.413 68.109 0 251 49 8 0 0 0 0.059579 1 34456 31.068 26.819 1 0.94938 0.79155 0 6723100 3673400 3049700 34347 855;864 13019 13377 53604 53604 THEAQIQEMR 10 0 1 Oxidation (M) _THEAQIQEM(ox)R_ THEAQIQEM(1)R THEAQIQEM(41.28)R 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.8002 2 629.795869 1257.57718 NaN NaN NaN -0.83335 -0.00052484 NaN NaN NaN NaN 23.714 0.27718 23.714 23.579 23.856 0 0 0 0 0.024073 1 8141 41.283 21.497 1 NaN NaN 0 1022700 0 1022700 34348 81 13020 13378 53605 53605 73 THEAQIQEMR 10 0 1 Unmodified _THEAQIQEMR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.803 2 621.798411 1241.58227 75355.22 0.391 0.00024312 0.028313 1.7605E-05 0.41931 0.00026072 621.798289179919 626.802630884643 23.57 0.46603 23.57 23.361 23.827 0 81 22 5 0 0 0 0.00080077 1 7546 81.017 72.796 1 5.1082 4.3418 0 2970700 359990 2610700 34349 81 13020 13379 53606 53606 THINIVVIGHVDSGK 15 1 0 Unmodified _THINIVVIGHVDSGK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q53GA1;A0A087WVQ9;B4DNE0;A0A087WV01;Q9H2I7;Q05639;A6PW80;Q5JR01;Q6NS35;Q6NSH7 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.9695 3 530.298373 1587.87329 82956.4 0.45642 0.00024204 -0.049254 -2.6119E-05 0.40716 0.00021592 530.297776438456 532.969724868102 73.556 1.4977 73.556 73.181 74.679 0 452 106 8 0 0 0 0.00015314 2 38917 56.215 56.215 1 1.6359 1.2682 0 12923000 4688100 8234900 34350 1658 13021 13380 53607;53608 53607 THINIVVIGHVDSGK 15 1 0 Unmodified _THINIVVIGHVDSGK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q53GA1;A0A087WVQ9;B4DNE0;A0A087WV01;Q9H2I7;Q05639;A6PW80;Q5JR01;Q6NS35;Q6NSH7 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.97 3 530.298373 1587.87329 83147.29 0.41483 0.00021998 -0.34986 -0.00018553 0.064966 3.4452E-05 530.297479243889 532.969623233687 73.5 1.3704 73.5 73.148 74.519 0 352 94 8 0 0 0 0.00015749 2 38033 55.912 55.912 1 1.9023 1.5539 0 8108500 2905000 5203500 34351 1658 13021 13380 53609;53610 53610 THINYGVK 8 1 0 Unmodified _THINYGVK_ 0 0 0 E9KL44;P40939;B4DRH6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.2534 2 466.253434 930.492316 88797.1 -0.051511 -2.4017E-05 0.78054 0.00036393 0.72903 0.00033991 466.25369123505 470.260849681771 21.788 0.39447 21.788 21.704 22.098 0 71 23 4 0 0 0 0.023961 1 8022 56.177 56.177 1 1.1198 1.197 0 32265000 14653000 17612000 34352 1228 13022 13381 53611 53611 THINYGVK 8 1 0 Unmodified _THINYGVK_ 0 0 0 E9KL44;P40939;B4DRH6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.2603 2 466.253434 930.492316 89876.96 0.14823 6.9115E-05 0.30099 0.00014034 0.44923 0.00020945 466.253431647808 470.260574379996 21.347 0.66455 21.347 21.015 21.679 0 110 31 8 0 0 0 0.0013184 1 7509 110.12 88.434 1 1.1105 1.2071 0 39449000 19059000 20390000 34353 1228 13022 13381 53612 53612 THINYGVK 8 1 0 Unmodified _THINYGVK_ 0 0 0 E9KL44;P40939;B4DRH6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 466.2535 2 466.253434 930.492316 89976.98 0.13404 6.2495E-05 0.054635 2.5474E-05 0.18867 8.7969E-05 466.253312512759 470.260691476827 23.474 0.5948 23.474 23.189 23.784 0 94 29 5 0 0 0 0.036793 1 7929 48.561 32.417 1 0.89959 0.69958 0 3392300 1826300 1566000 34354 1228 13022 13381 53613 53613 THINYGVK 8 1 0 Unmodified _THINYGVK_ 0 0 0 E9KL44;P40939;B4DRH6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 466.2533 2 466.253434 930.492316 90092.47 0.059044 2.753E-05 -0.16278 -7.5895E-05 -0.10373 -4.8365E-05 466.25331257898 470.26033208315 23.162 0.52124 23.162 23.003 23.524 0 75 23 5 0 0 0 0.057022 1 7257 41.188 24.894 1 1.0656 0.82982 0 3582100 1488500 2093600 34355 1228 13022 13381 53614 53614 THIVSIPLR 9 0 1 Unmodified _THIVSIPLR_ 0 0 0 Q8N556 Q8N556 Q8N556 AFAP1 Actin filament-associated protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.3201 2 518.319109 1034.62366 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.791 1 60.791 60.291 61.291 0 0 0 0 0.013328 1 35611 60.436 43.66 1 34356 1910 13023 13382 53615 53615 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.7911 2 581.790578 1161.5666 80052.54 0.47763 0.00027788 -0.1051 -6.1145E-05 0.37253 0.00021674 581.790522791331 585.797537699373 32.618 1.2382 32.618 32.078 33.316 0 526 117 8 0 0 0 0.00031636 2 16165 90.263 66.307 1 0.90011 1.0179 0 85256000 44364000 40892000 34357 773 13024 13383 53616;53617 53617 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.7904 2 581.790578 1161.5666 NaN NaN NaN -0.38364 -0.0002232 NaN NaN NaN NaN 31.361 0.81724 31.361 30.878 31.696 0 0 0 0 0.0068687 1 15388 66.568 56.581 1 NaN NaN 0 80196000 80196000 0 34358 773 13024 13383 53618 53618 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.7905 2 581.790578 1161.5666 77925.62 0.39212 0.00022813 -0.19939 -0.00011601 0.19273 0.00011213 581.790513754554 585.797450591489 36.969 1.2086 36.969 36.593 37.801 0 419 97 7 0 0 0 0.043038 1 16520 37.556 29.373 1 1.0868 0.87357 0 21661000 9920200 11741000 34359 773 13024 13383 53619 53619 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 585.7978 2 581.790578 1161.5666 79477.52 0.33504 0.00019492 -0.09123 -5.3077E-05 0.24381 0.00014185 581.790514977733 585.797460563446 36.78 1.1282 36.78 36.334 37.462 0 461 98 8 0 0 0 0.00041361 2 15953 87.258 71.055 1 1.0856 0.87067 0 18911000 9255200 9656000 34360 773 13024 13383 53620;53621 53620 THLSLSHNPEQK 12 1 0 Unmodified _THLSLSHNPEQK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809;V9GYY3 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.2455 3 464.240635 1389.70008 87263.7 0.35438 0.00016452 -1.0102 -0.00046899 -0.65585 -0.00030447 464.241513367315 466.911698708919 21.525 0.59376 21.525 21.19 21.784 -1.9073E-06 68 31 5 0 0 0 0.037644 1 7795 23.809 18.515 1 1.8691 1.9505 0 12220000 3365500 8854200 34361 196 13025 13384 53622 53622 THMVVANTMEDFQK 14 1 0 2 Oxidation (M) _THM(ox)VVANTM(ox)EDFQK_ THM(1)VVANTM(1)EDFQK THM(57.35)VVANTM(57.35)EDFQK 0 2 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.8867 2 841.879272 1681.74399 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.764 1 27.764 27.264 28.264 0 0 0 0 0.0024451 1 12906 57.348 45.482 1 34362 1454 13026 13385 53623 53623 1162;1163 THMVVANTMEDFQK 14 1 0 2 Oxidation (M) _THM(ox)VVANTM(ox)EDFQK_ THM(1)VVANTM(1)EDFQK THM(49.5)VVANTM(49.5)EDFQK 0 2 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.8868 2 841.879272 1681.74399 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.121 1 27.121 26.621 27.621 -1.9073E-06 0 0 0 0.010071 1 12459 49.5 40.312 1 34363 1454 13026 13385 53624 53624 1162;1163 THNGESVSYLFSHVPL 16 0 0 Unmodified _THNGESVSYLFSHVPL_ 0 0 0 Q53FW2;P60891;B1ALA9;B7ZB02;A0A140VK41;P11908;H7C540 Q53FW2;A0A140VK41 Q53FW2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.2985 3 596.296809 1785.8686 NaN NaN NaN -0.029604 -1.7653E-05 NaN NaN NaN NaN 112.48 0.85442 112.48 111.98 112.84 0 0 0 0 0.00088691 1 71173 50.158 45.61 1 34364 1626;616 13027 13386 53625 53625 THNIGFDK 8 1 0 Unmodified _THNIGFDK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.2352 2 466.235242 930.45593 90975.09 -0.24412 -0.00011382 0.56831 0.00026497 0.32418 0.00015115 466.235450183445 470.242345992742 22.027 0.38808 22.027 21.893 22.281 1.9073E-06 80 21 6 0 0 0 0.019716 2 8171 58.955 39.046 1 1.0862 1.0642 0 22294000 11629000 10664000 34365 104 13028 13387 53626;53627 53626 THNIGFDK 8 1 0 Unmodified _THNIGFDK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.2351 2 466.235242 930.45593 89327.3 0.057791 2.6944E-05 0.39903 0.00018604 0.45682 0.00021299 466.235213420359 470.24239953211 21.582 0.37446 21.582 21.426 21.801 0 58 18 5 0 0 0 0.021622 1 7707 57.708 39.329 1 0.9507 0.9732 0 25621000 13599000 12021000 34366 104 13028 13387 53628 53628 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 997.4911 2 997.491964 1992.96938 NaN NaN NaN -0.52656 -0.00052524 NaN NaN NaN NaN 120.06 1.1004 120.06 119.64 120.74 0 0 0 0 0.013863 1 77752 53.528 48.035 1 NaN NaN 0 35696000 35696000 0 + 34367 1308;1309 13029 13388 53629 53629 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.6656 3 665.330402 1992.96938 NaN NaN NaN 0.010844 7.2147E-06 NaN NaN NaN NaN 121.9 0.68208 121.9 121.51 122.2 0 0 0 0 1.9995E-47 1 78599 162.46 148.23 1 NaN NaN 0 27581000 27581000 0 + 34368 1308;1309 13029 13388 53630 53630 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.6652 3 665.330402 1992.96938 NaN NaN NaN 0.11489 7.6441E-05 NaN NaN NaN NaN 122.75 3.0239 122.75 122.03 125.05 0 0 0 0 3.9821E-05 3 79480 74.772 68.992 1 NaN NaN 0 41083000 41083000 0 + 34369 1308;1309 13029 13388 53631;53632;53633 53631 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.6647 3 665.330402 1992.96938 NaN NaN NaN 0.066063 4.3953E-05 NaN NaN NaN NaN 119.22 1.7345 119.22 118.66 120.4 0 0 0 0 5.5253E-13 3 78833 108.63 98.149 1 NaN NaN 0 389300000 389300000 0 + 34370 1308;1309 13029 13388 53634;53635;53636 53635 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 997.4909 2 997.491964 1992.96938 NaN NaN NaN -0.021391 -2.1337E-05 NaN NaN NaN NaN 119.2 0.93635 119.2 118.78 119.72 0 0 0 0 0.0073432 1 78316 64.55 51.35 1 NaN NaN 0 70216000 70216000 0 + 34371 1308;1309 13029 13388 53637 53637 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.6656 3 665.330402 1992.96938 NaN NaN NaN 0.16041 0.00010672 NaN NaN NaN NaN 121.09 3.6965 121.09 120.26 123.96 -7.6294E-06 0 0 0 3.5853E-13 3 80093 112.03 104.8 1 NaN NaN 0 74742000 74742000 0 + 34372 1308;1309 13029 13388 53638;53639;53640 53638 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 997.4931 2 997.491964 1992.96938 NaN NaN NaN -0.29929 -0.00029854 NaN NaN NaN NaN 121.32 1.3612 121.32 120.37 121.73 0 0 0 0 0.015874 1 80523 53.967 45.862 1 NaN NaN 0 12881000 12881000 0 + 34373 1308;1309 13029 13388 53641 53641 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.6648 3 665.330402 1992.96938 NaN NaN NaN 0.20589 0.00013698 NaN NaN NaN NaN 131.1 2.2883 131.1 130.77 133.06 0 0 0 0 1.4793E-10 3 79375 105.39 93.366 1 NaN NaN 0 244800000 244800000 0 + 34374 1308;1309 13029 13388 53642;53643;53644 53642 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 997.4913 2 997.491964 1992.96938 NaN NaN NaN -0.61178 -0.00061024 NaN NaN NaN NaN 131.1 0.87677 131.1 130.82 131.7 0 0 0 0 0.00021874 1 79442 88.552 75.352 1 NaN NaN 0 23935000 23935000 0 + 34375 1308;1309 13029 13388 53645 53645 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.665 3 665.330402 1992.96938 NaN NaN NaN -0.67284 -0.00044766 NaN NaN NaN NaN 134.23 0.70544 134.23 133.64 134.35 0 0 0 0 0.017765 1 81835 32.55 26.77 1 NaN NaN 0 4289100 4289100 0 + 34376 1308;1309 13029 13388 53646 53646 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.6645 3 665.330402 1992.96938 NaN NaN NaN 0.053039 3.5289E-05 NaN NaN NaN NaN 130.76 2.0723 130.76 130.36 132.44 0 0 0 0 1.205E-06 3 78235 80.488 74.708 1 NaN NaN 0 341480000 341480000 0 + 34377 1308;1309 13029 13388 53647;53648;53649 53647 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 997.4954 2 997.491964 1992.96938 NaN NaN NaN -0.26976 -0.00026909 NaN NaN NaN NaN 130.76 0.93355 130.76 130.52 131.45 0 0 0 0 0.010353 1 78293 61.212 53.301 1 NaN NaN 0 51790000 51790000 0 + 34378 1308;1309 13029 13388 53650 53650 THNLEPYFESFINNLRR 17 0 2 Unmodified _THNLEPYFESFINNLRR_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.3635 3 717.364105 2149.07049 NaN NaN NaN -0.78319 -0.00056183 NaN NaN NaN NaN 115.99 0.41563 115.99 115.71 116.12 0 0 0 0 0.0023801 1 73905 33.697 18.775 1 NaN NaN 0 4881300 4881300 0 + 34379 1308;1309 13030 13389 53651 53651 THNLEPYFESFINNLRR 17 0 2 Unmodified _THNLEPYFESFINNLRR_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.6989 3 717.364105 2149.07049 NaN NaN NaN -0.22387 -0.0001606 NaN NaN NaN NaN 123.05 1.2555 123.05 122.74 124 7.6294E-06 0 0 0 0.011353 1 73385 30.107 23.157 1 NaN NaN 0 29924000 29924000 0 + 34380 1308;1309 13030 13389 53652 53652 THNLEPYFESFINNLRR 17 0 2 Unmodified _THNLEPYFESFINNLRR_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.2751 4 538.274898 2149.07049 NaN NaN NaN -0.59324 -0.00031933 NaN NaN NaN NaN 123.07 0.49432 123.07 122.89 123.38 -7.6294E-06 0 0 0 0.025411 2 73543 18.296 14.202 1 NaN NaN 0 836000 836000 0 + 34381 1308;1309 13030 13389 53653;53654 53654 THNLEPYFESFINNLRR 17 0 2 Unmodified _THNLEPYFESFINNLRR_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.6989 3 717.364105 2149.07049 NaN NaN NaN -0.19112 -0.0001371 NaN NaN NaN NaN 122.79 0.87375 122.79 122.46 123.33 0 0 0 0 0.0045337 1 72285 41.202 34.769 1 NaN NaN 0 22893000 22893000 0 + 34382 1308;1309 13030 13389 53655 53655 THNLEPYFESFINNLRR 17 0 2 Unmodified _THNLEPYFESFINNLRR_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.7761 4 538.274898 2149.07049 NaN NaN NaN -0.24301 -0.00013081 NaN NaN NaN NaN 122.78 0.3119 122.78 122.63 122.95 0 0 0 0 0.01267 1 72367 23.33 19.551 1 NaN NaN 0 879520 879520 0 + 34383 1308;1309 13030 13389 53656 53656 THPVEIFYTPEPERDYLEAAIR 22 0 2 Unmodified _THPVEIFYTPEPERDYLEAAIR_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 889.7836 3 882.778132 2645.31257 65328.93 0.37618 0.00033209 0.1355 0.00011961 0.51168 0.0004517 883.112109503275 889.784960571441 117.06 0.86223 117.06 116.69 117.55 0 207 36 9 0 0 0 0.0017187 3 68923 28.412 28.412 1 1.058 0.90275 0 6760400 3245700 3514700 34384 1379 13031 13390 53657;53658;53659 53659 THPVEIFYTPEPERDYLEAAIR 22 0 2 Unmodified _THPVEIFYTPEPERDYLEAAIR_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.5865 4 662.335418 2645.31257 74402.12 0.46001 0.00030468 0.4043 0.00026778 0.86431 0.00057247 662.586011779189 667.340357154086 117.02 0.70714 117.02 116.72 117.43 -7.6294E-06 158 29 8 0 0 0 0.024392 2 68883 16.096 16.096 1 1.1686 1.0164 0 4770900 2654300 2116700 34385 1379 13031 13390 53660;53661 53660 THPVEIFYTPEPERDYLEAAIR 22 0 2 Unmodified _THPVEIFYTPEPERDYLEAAIR_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.3312 4 662.335418 2645.31257 74766.25 0.7072 0.0004684 0.34874 0.00023099 1.0559 0.00069939 662.837121977514 667.340143026204 116.82 0.92134 116.82 116.4 117.33 0 200 41 10 0 0 0 0.057267 1 67629 7.1933 4.7529 1 1.0767 0.97807 0 6153600 2804100 3349500 34386 1379 13031 13390 53662 53662 THPVEIFYTPEPERDYLEAAIR 22 0 2 Unmodified _THPVEIFYTPEPERDYLEAAIR_ 0 0 1 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 883.1125 3 882.778132 2645.31257 64181.64 0.36398 0.00032131 0.35176 0.00031053 0.71574 0.00063184 883.447160639378 889.450532380924 116.79 0.687 116.79 116.48 117.17 0 188 30 8 0 0 0 0.020426 3 67789 20.606 20.606 1 1.0595 0.96905 0 9581800 4602500 4979300 34387 1379 13031 13390 53663;53664;53665 53664 THQALGILSK 10 1 0 Unmodified _THQALGILSK_ 0 0 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.3214 2 534.314023 1066.61349 83836.34 0.31621 0.00016896 0.025976 1.3879E-05 0.34219 0.00018284 534.313953098661 538.321075270078 46.416 0.42277 46.416 46.237 46.659 0 106 25 6 0 0 0 0.018733 1 22305 47.334 47.334 1 1.3257 1.0521 0 2997400 1331900 1665500 34388 1562 13032 13391 53666 53666 THQALGILSK 10 1 0 Unmodified _THQALGILSK_ 0 0 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.3212 2 534.314023 1066.61349 85120.08 0.42022 0.00022453 -0.20262 -0.00010826 0.2176 0.00011627 534.31370527032 538.321180571996 45.999 0.49159 45.999 45.799 46.291 -3.8147E-06 138 34 6 0 0 0 0.034278 1 21566 41.08 41.08 1 1.1585 0.90946 0 2259800 1018500 1241300 34389 1562 13032 13391 53667 53667 THQPSDEVGTSIEHPR 16 0 1 Unmodified _THQPSDEVGTSIEHPR_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.7928 3 597.286973 1788.83909 78255.14 0.5518 0.00032959 0.076178 4.55E-05 0.62798 0.00037509 597.621265428446 600.622905992246 25.828 0.35052 25.828 25.654 26.004 0 60 18 5 0 0 0 0.052899 1 11365 28.032 28.032 1 0.27904 0.29074 0 21645000 14965000 6679800 34390 1965 13033 13392 53668 53668 THQPSDEVGTSIEHPR 16 0 1 Unmodified _THQPSDEVGTSIEHPR_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.2882 3 597.286973 1788.83909 78303.93 0.57892 0.00034578 -0.29614 -0.00017688 0.28278 0.0001689 597.621090233043 600.622608981715 24.993 0.5788 24.993 24.574 25.153 1.9073E-06 81 25 7 0 0 0 1.0467E-06 1 10596 89.311 83.28 1 0.27459 0.30005 0 36966000 28446000 8519000 34391 1965 13033 13392 53669 53669 THSIIPR 7 0 1 Unmodified _THSIIPR_ 0 0 0 F2Z2U4;Q9Y4A5 F2Z2U4 F2Z2U4 TRRAP Transformation/transcription domain-associated protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.2473 2 412.24287 822.471186 NaN NaN NaN -0.20875 -8.6055E-05 NaN NaN NaN NaN 24.705 0.24089 24.705 24.552 24.792 0 0 0 0 0.041103 1 10370 62.717 25.072 1 NaN NaN 0 3553500 0 3553500 34392 1253 13034 13393 53670 53670 THSVNGITEEADPTIYSGK 19 1 0 Unmodified _THSVNGITEEADPTIYSGK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93;Q8WU01 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 676.3317 3 673.660364 2017.95926 73085.88 0.6831 0.00046018 0.78506 0.00052886 1.4682 0.00098904 673.995104665267 676.332365026115 59.562 0.58886 59.562 59.307 59.896 0 133 51 5 0 0 0 8.5394E-05 1 34611 44.641 44.641 1 2.8315 2.9528 0 24416000 5110500 19306000 34393 42 13035 13394 53671 53671 THSVPATPTSTPVPNPEAESSSK 23 1 0 Unmodified _THSVPATPTSTPVPNPEAESSSK_ 0 0 0 A0A024R5D6;B5MBX0;Q96FF9 A0A024R5D6 A0A024R5D6 CDCA5 Sororin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.3846 3 774.380038 2320.11828 69849.09 0.5959 0.00046145 -0.48928 -0.00037889 0.10662 8.2567E-05 774.714305887573 777.384325109805 52.524 0.62225 52.524 52.264 52.886 0 171 44 7 0 0 0 0.00049467 4 29220 32.706 32.706 1 0.91502 0.94188 0 14545000 5778700 8766600 34394 178 13036 13395 53672;53673;53674;53675 53675 THSVPATPTSTPVPNPEAESSSK 23 1 0 Unmodified _THSVPATPTSTPVPNPEAESSSK_ 0 0 0 A0A024R5D6;B5MBX0;Q96FF9 A0A024R5D6 A0A024R5D6 CDCA5 Sororin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.3828 3 774.380038 2320.11828 NaN NaN NaN -0.31653 -0.00024511 NaN NaN NaN NaN 51.216 0.40215 51.216 51.055 51.458 -3.8147E-06 0 0 0 6.5574E-10 2 28933 65.149 57.225 1 NaN NaN 0 10242000 10242000 0 34395 178 13036 13395 53676;53677 53676 THSVPATPTSTPVPNPEAESSSK 23 1 0 Unmodified _THSVPATPTSTPVPNPEAESSSK_ 0 0 0 A0A024R5D6;B5MBX0;Q96FF9 A0A024R5D6 A0A024R5D6 CDCA5 Sororin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.3828 3 774.380038 2320.11828 NaN NaN NaN -1.2663 -0.00098058 NaN NaN NaN NaN 51.149 0.35262 51.149 51.078 51.431 0 0 0 0 0.0022845 1 29076 33.747 28.62 1 NaN NaN 0 10910000 0 10910000 34396 178 13036 13395 53678 53678 THSVPATPTSTPVPNPEAESSSK 23 1 0 Unmodified _THSVPATPTSTPVPNPEAESSSK_ 0 0 0 A0A024R5D6;B5MBX0;Q96FF9 A0A024R5D6 A0A024R5D6 CDCA5 Sororin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.3868 3 774.380038 2320.11828 68472.28 0.66501 0.00051497 0.080335 6.221E-05 0.74534 0.00057718 774.714633311812 777.385298142336 61.438 0.53409 61.438 61.171 61.705 3.8147E-06 211 43 6 0 0 0 0.029974 2 31433 15.128 15.128 1 0.62659 0.49689 0 4390100 2864600 1525500 34397 178 13036 13395 53679;53680 53680 THSVPATPTSTPVPNPEAESSSK 23 1 0 Unmodified _THSVPATPTSTPVPNPEAESSSK_ 0 0 0 A0A024R5D6;B5MBX0;Q96FF9 A0A024R5D6 A0A024R5D6 CDCA5 Sororin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 774.3812 3 774.380038 2320.11828 68459.22 0.5549 0.0004297 -0.05273 -4.0833E-05 0.50217 0.00038887 774.714207110304 777.051379912439 61.998 0.58279 61.998 61.727 62.31 0 197 42 7 0 0 0 0.013477 2 31046 20.426 20.426 1 0.63681 0.50807 0 4104500 2362000 1742500 34398 178 13036 13395 53681;53682 53681 THTCQVIIENVSK 13 1 0 Unmodified _THTCQVIIENVSK_ 0 0 0 Q8ND82 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 768.9006 2 764.89304 1527.77153 NaN NaN NaN 0.16133 0.0001234 NaN NaN NaN NaN 50.193 0.57059 50.193 49.965 50.535 -3.8147E-06 0 0 0 0.0013981 1 24545 75.89 60.318 1 NaN NaN 0 2373600 0 2373600 34399 1924 13037 13396 53683 53683 THTIQGTIK 9 1 0 Unmodified _THTIQGTIK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.785 2 499.785099 997.555644 86690.55 -0.26824 -0.00013406 0.37441 0.00018712 0.10616 5.3058E-05 499.785157031669 503.792334900881 19.773 0.48424 19.773 19.619 20.103 0 80 20 8 0 0 0 1.5962E-34 2 6110 196.79 164.18 1 0.75191 0.84974 0 130700000 72486000 58216000 34400 1421 13038 13397 53684;53685 53684 THTIQGTIK 9 1 0 Unmodified _THTIQGTIK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 503.7923 2 499.785099 997.555644 NaN NaN NaN 0.31804 0.00015895 NaN NaN NaN NaN 21.312 0.4457 21.312 21.207 21.653 0 0 0 0 1.9682E-24 1 6360 162.88 100.22 1 NaN NaN 0 25951000 0 25951000 34401 1421 13038 13397 53686 53686 THTIQGTIK 9 1 0 Unmodified _THTIQGTIK_ 0 0 0 O95235;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 503.7921 2 499.785099 997.555644 84716.64 -0.28485 -0.00014236 0.38713 0.00019348 0.10228 5.1119E-05 499.785302284268 503.792285883283 20.905 0.78757 20.905 20.659 21.446 0 177 37 10 0 0 0 3.1381E-06 2 5661 134.66 134.66 1 1.2411 0.99846 0 22641000 10164000 12477000 34402 1421 13038 13397 53687;53688 53687 THVADFAPEVAWVTR 15 0 1 Unmodified _THVADFAPEVAWVTR_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.2941 3 566.958128 1697.85255 NaN NaN NaN -0.39652 -0.00022481 NaN NaN NaN NaN 101.19 0.26611 101.19 101.07 101.34 0 0 0 0 0.0020663 1 62090 53.828 42.389 1 NaN NaN 0 8454100 0 8454100 34403 1454 13039 13398 53689 53689 TIADLELHYQEFIR 14 0 1 Unmodified _TIADLELHYQEFIR_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.3052 3 583.305305 1746.89408 81790.97 0.7222 0.00042126 0.31228 0.00018216 1.0345 0.00060342 583.639781562871 586.641332343158 108.36 0.51944 108.36 108.03 108.54 0 142 39 7 0 0 0 0.0023096 1 67648 40.278 40.278 1 0.55935 0.57482 0 14256000 7745900 6510500 34404 1486 13040 13399 53690 53690 TIADSLINSFLK 12 1 0 Unmodified _TIADSLINSFLK_ 0 0 0 Q15058 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.8805 2 661.371735 1320.72892 NaN NaN NaN -0.89089 -0.00058921 NaN NaN NaN NaN 127.06 0.65334 127.06 126.77 127.42 0 0 0 0 0.041638 1 82747 43.282 28.131 1 NaN NaN 0 2660900 0 2660900 34405 1751 13041 13400 53691 53691 TIAECLADELINAAK 15 1 0 Unmodified _TIAECLADELINAAK_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.4263 2 816.419088 1630.82362 64866.55 0.9003 0.00073502 -0.25026 -0.00020431 0.65004 0.00053071 816.419170387167 820.42608205091 124.52 0.93981 124.52 124.2 125.14 0 459 64 11 0 0 0 2.621E-10 2 80722 118.48 102.23 1 1.0494 1.1818 0 123590000 59758000 63834000 34406 160 13042 13401 53692;53693 53693 TIAECLADELINAAK 15 1 0 Unmodified _TIAECLADELINAAK_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.4266 2 816.419088 1630.82362 65975.77 1.0187 0.00083166 -0.063747 -5.2044E-05 0.95492 0.00077961 816.419334091208 820.426167242292 124.13 1.1616 124.13 123.78 124.94 -7.6294E-06 481 77 11 0 0 0 1.618E-30 2 82382 155.97 139.72 1 1.0561 1.2 0 143280000 70054000 73229000 34407 160 13042 13401 53694;53695 53695 TIAECLADELINAAK 15 1 0 Unmodified _TIAECLADELINAAK_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.4189 2 816.419088 1630.82362 65460.81 0.84113 0.00068672 0.08725 7.1233E-05 0.92838 0.00075795 816.418440204934 820.425681597202 134.73 0.37529 134.73 134.62 135 0 25 7 8 0 0 0 0.00022178 1 82457 66.498 49.472 1 3.9055 3.3561 0 85829000 40597000 45233000 34408 160 13042 13401 53696 53696 TIAFAHDSTR 10 0 1 Unmodified _TIAFAHDSTR_ 0 0 0 Q15397 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.7824 2 559.783087 1117.55162 82203.91 0.44623 0.00024979 0.06325 3.5406E-05 0.50948 0.0002852 559.783186416805 564.787159455682 28.694 0.81821 28.694 28.446 29.265 0 177 60 5 0 0 0 0.009241 2 11517 54.982 38.779 1 1.0489 0.90414 0 2656000 1476500 1179500 34409 1761 13043 13402 53697;53698 53698 TIAFAHDSTR 10 0 1 Unmodified _TIAFAHDSTR_ 0 0 0 Q15397 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 373.5244 3 373.524484 1117.55162 97577.2 -0.29067 -0.00010857 0.48545 0.00018133 0.19478 7.2755E-05 373.524650356036 376.860729145544 28.92 0.64165 28.92 28.718 29.36 3.8147E-06 134 39 8 0 0 0 0.059656 1 11144 23.754 21.021 1 0.91654 0.76564 0 4945500 2671400 2274100 34410 1761 13043 13402 53699 53699 TIAFAHDSTR 10 0 1 Unmodified _TIAFAHDSTR_ 0 0 0 Q15397 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.787 2 559.783087 1117.55162 NaN NaN NaN 0.094673 5.2996E-05 NaN NaN NaN NaN 28.92 0.51011 28.92 28.729 29.24 0 0 0 0 0.040151 1 11101 49.35 22.967 1 NaN NaN 0 2548200 0 2548200 34411 1761 13043 13402 53700 53700 TIAFAHDSTR 10 0 1 Unmodified _TIAFAHDSTR_ 0 0 0 Q15397 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.7831 2 559.783087 1117.55162 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.861 1 28.861 28.361 29.361 -1.9073E-06 0 0 0 0.036911 1 11112 48.091 30.705 1 34412 1761 13043 13402 53701 53701 TIAFLLPMFR 10 0 1 Oxidation (M) _TIAFLLPM(ox)FR_ TIAFLLPM(1)FR TIAFLLPM(54.16)FR 0 1 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8456 2 612.844102 1223.67365 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.27 1 123.27 122.77 123.77 0 0 0 0 0.0088839 1 79913 54.157 25.008 1 34413 511 13044 13403 53702 53702 360 TIAFLLPMFR 10 0 1 Oxidation (M) _TIAFLLPM(ox)FR_ TIAFLLPM(1)FR TIAFLLPM(73.93)FR 0 1 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8489 2 612.844102 1223.67365 NaN NaN NaN 0.45936 0.00028152 NaN NaN NaN NaN 122.97 0.93137 122.97 122.34 123.28 0 0 0 0 0.0012803 1 81355 73.931 54.144 1 NaN NaN 0 2854600 0 2854600 34414 511 13044 13403 53703 53703 360 TIAFLLPMFR 10 0 1 Oxidation (M) _TIAFLLPM(ox)FR_ TIAFLLPM(1)FR TIAFLLPM(50.88)FR 0 1 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8447 2 612.844102 1223.67365 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.76 1 122.76 122.26 123.26 0 0 0 0 0.013232 1 81447 50.878 32.096 1 34415 511 13044 13403 53704 53704 360 TIAIIAEGIPEALTR 15 0 1 Unmodified _TIAIIAEGIPEALTR_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;Q8N9C4 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.4566 2 784.45633 1566.89811 71909.56 1.0038 0.00078743 0.15609 0.00012245 1.1599 0.00090988 784.456818901762 789.460507772546 119.3 0.70242 119.3 119 119.7 0 154 45 5 0 0 0 0.00038246 1 76588 58.676 58.676 1 1.7706 1.8011 0 7258700 2249400 5009300 34416 89 13045 13404 53705 53705 TIAIIAEGIPEALTR 15 0 1 Unmodified _TIAIIAEGIPEALTR_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;Q8N9C4 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.9594 2 784.45633 1566.89811 73261.91 0.78646 0.00061694 -0.0076233 -5.9802E-06 0.77884 0.00061096 784.456320195169 789.460330061401 131.78 0.62157 131.78 131.46 132.08 0 79 29 4 0 0 0 0.0023813 1 80030 45.077 45.077 1 0.84314 0.75436 0 791430 369190 422240 34417 89 13045 13404 53706 53706 TIAPQNAPR 9 0 1 Unmodified _TIAPQNAPR_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7;H0YF00 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.2739 2 484.269616 966.524678 87185.2 0.17153 8.3068E-05 0.17966 8.7005E-05 0.35119 0.00017007 484.26970087383 489.27369770745 22.879 0.68565 22.879 22.63 23.316 0 146 36 6 0 0 0 0.018672 1 8784 51.854 40.491 1 1.0349 1.0629 0 36298000 17864000 18434000 34418 2083 13046 13405 53707 53707 TIAPQNAPR 9 0 1 Unmodified _TIAPQNAPR_ 0 0 0 Q9NYF8;Q6DCA8;E9PK09;E9PQN2;E9PKI6;E9PK91;E9PJA7;H0YF00 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.2736 2 484.269616 966.524678 86466.77 0.35475 0.00017179 0.077821 3.7686E-05 0.43257 0.00020948 484.269628667234 489.273720426764 22.658 0.55757 22.658 22.436 22.994 0 109 23 7 0 0 0 0.0003362 1 8607 101.64 70.354 1 1.1728 1.2962 0 41901000 19017000 22884000 34419 2083 13046 13405 53708 53708 TIAQDYGVLK 10 1 0 Unmodified _TIAQDYGVLK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.3135 2 554.305864 1106.59717 82730.55 0.39347 0.0002181 -0.058837 -3.2614E-05 0.33463 0.00018549 554.306177621251 558.312907721111 64.508 1.0724 64.508 63.979 65.051 0 486 93 9 0 0 0 0.0073232 2 36855 57.59 42.439 1 3.3673 3.7849 0 70139000 17077000 53062000 34420 1690 13047 13406 53709;53710 53709 TIAQDYGVLK 10 1 0 Unmodified _TIAQDYGVLK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.313 2 554.305864 1106.59717 NaN NaN NaN 0.1394 7.7268E-05 NaN NaN NaN NaN 63.376 1.4906 63.376 62.673 64.164 3.8147E-06 0 0 0 0.0048804 1 37023 70.919 46.764 1 NaN NaN 0 42599000 0 42599000 34421 1690 13047 13406 53711 53711 TIAQDYGVLK 10 1 0 Unmodified _TIAQDYGVLK_ 0 0 0 Q06830;A0A0A0MSI0;B2R4P2 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.313 2 554.305864 1106.59717 81627.57 0.54109 0.00029993 0.36019 0.00019965 0.90128 0.00049958 554.305922190818 558.313112735985 74.326 1.131 74.326 73.773 74.904 0 244 77 5 0 0 0 0.044039 1 39407 37.153 20.951 1 2.9832 2.3758 0 2953200 982910 1970300 34422 1690 13047 13406 53712 53712 TIAVDFASEDIYDK 14 1 0 Unmodified _TIAVDFASEDIYDK_ 0 0 0 B4DWS6;B3KQJ0;D3DR22;Q53GQ0;E9PI21;A0A1B0GVY6 B4DWS6 B4DWS6 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.9066 2 793.882861 1585.75117 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.267 1 98.267 97.767 98.767 0 0 0 0 0.033771 1 60048 42.629 30.053 1 34423 928 13048 13407 53713 53713 TICAEFAILR 10 0 1 Unmodified _TICAEFAILR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.3206 2 597.320991 1192.62743 NaN NaN NaN -0.35808 -0.00021389 NaN NaN NaN NaN 102.59 0.72416 102.59 102.16 102.88 0 0 0 0 0.037513 1 63230 50.04 28.74 1 NaN NaN 0 4902200 4902200 0 34424 1411 13049 13408 53714 53714 TICAEFAILR 10 0 1 Unmodified _TICAEFAILR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.3242 2 597.320991 1192.62743 77476.45 0.61275 0.00036601 -0.65522 -0.00039138 -0.042478 -2.5373E-05 597.32072498754 602.324450779037 101.7 0.54695 101.7 101.37 101.91 0 122 43 4 0 0 0 0.00086964 2 63997 79.906 68.685 1 1.0134 1.016 0 18944000 7436300 11507000 34425 1411 13049 13408 53715;53716 53716 TICAEFAILR 10 0 1 Unmodified _TICAEFAILR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.3202 2 597.320991 1192.62743 NaN NaN NaN -0.46464 -0.00027754 NaN NaN NaN NaN 114.72 0.31651 114.72 114.59 114.91 7.6294E-06 0 0 0 0.048381 1 67056 47.198 16.943 1 NaN NaN 0 1036200 1036200 0 34426 1411 13049 13408 53717 53717 TICSHVQNMIK 11 1 0 Oxidation (M) _TICSHVQNM(ox)IK_ TICSHVQNM(1)IK TICSHVQNM(155.06)IK 0 1 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8;Q2NKY6;H0Y9R4 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.831 2 673.831397 1345.64824 73039.05 0.69563 0.00046873 -0.12118 -8.1658E-05 0.57444 0.00038708 673.831307191465 677.83861229619 25.211 0.61384 25.211 24.946 25.56 -1.9073E-06 147 31 7 0 0 0 4.5128E-17 2 10710 155.06 143.69 1 1.3682 1.4844 0 45357000 19395000 25962000 34427 1537 13050 13409 53718;53719 53719 1298 TICSHVQNMIK 11 1 0 Oxidation (M) _TICSHVQNM(ox)IK_ TICSHVQNM(1)IK TICSHVQNM(84.66)IK 0 1 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8;Q2NKY6;H0Y9R4 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 452.2278 3 449.55669 1345.64824 87090.38 0.15467 6.9534E-05 -0.37363 -0.00016797 -0.21896 -9.8436E-05 449.556659863426 452.228018491903 25.269 0.74443 25.269 24.931 25.675 0 223 38 8 0 0 0 9.1056E-05 2 10701 84.658 76.554 1 1.3487 1.513 0 66434000 28179000 38256000 34428 1537 13050 13409 53720;53721 53720 1298 TICSHVQNMIK 11 1 0 Oxidation (M) _TICSHVQNM(ox)IK_ TICSHVQNM(1)IK TICSHVQNM(151.22)IK 0 1 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8;Q2NKY6;H0Y9R4 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8395 2 673.831397 1345.64824 72093.89 0.73437 0.00049484 -0.10248 -6.9052E-05 0.63189 0.00042579 673.831494755368 677.838672996869 24.821 0.56914 24.821 24.514 25.084 -1.9073E-06 150 25 8 0 0 0 6.6424E-17 3 10306 151.22 140.46 1 1.344 1.5106 0 73435000 28206000 45228000 34429 1537 13050 13409 53722;53723;53724 53723 1298 TICSHVQNMIK 11 1 0 Oxidation (M) _TICSHVQNM(ox)IK_ TICSHVQNM(1)IK TICSHVQNM(79.69)IK 0 1 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8;Q2NKY6;H0Y9R4 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.2284 3 449.55669 1345.64824 88948.34 0.293 0.00013172 -0.47581 -0.00021391 -0.18282 -8.2186E-05 449.556601654791 452.227997685639 24.808 0.80199 24.808 24.478 25.28 0 200 34 9 0 0 0 0.00010709 2 10368 79.693 71.589 1 1.3112 1.4653 0 95377000 40971000 54406000 34430 1537 13050 13409 53725;53726 53726 1298 TICSHVQNMIK 11 1 0 Oxidation (M) _TICSHVQNM(ox)IK_ TICSHVQNM(1)IK TICSHVQNM(42.19)IK 0 1 0 Q53Z07;P32969;E7ESE0;D6RAN4;H0Y9V9;B4E1M5;B4DLV8;Q2NKY6;H0Y9R4 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.8314 2 673.831397 1345.64824 75084.28 0.22379 0.00015079 -0.067356 -4.5387E-05 0.15643 0.00010541 673.831385269873 677.838771299818 28.691 0.82409 28.691 28.106 28.93 0 174 46 6 0 0 0 0.011409 1 10741 42.19 42.19 1 0.65733 0.51167 0 2190800 1264700 926030 34431 1537 13050 13409 53727 53727 1298 TIDGILLLIER 11 0 1 Unmodified _TIDGILLLIER_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3839 2 628.384645 1254.75474 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.14 1 129.14 128.64 129.64 0 0 0 0 3.6127E-06 1 86240 96.89 74.804 1 34432 1718 13051 13410 53728 53728 TIDGQQTIIACIESHQFQPK 20 1 0 Unmodified _TIDGQQTIIACIESHQFQPK_ 0 0 0 A8K0T9;A0A024R0E5;P52907 A8K0T9 A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.7273 3 772.05472 2313.14233 71432.19 0.89788 0.00069321 -0.19898 -0.00015362 0.6989 0.00053959 772.054109682496 774.726030052585 101.24 0.31171 101.24 101.07 101.38 7.6294E-06 67 24 4 0 0 0 0.032349 1 62220 19.42 19.42 1 1.468 1.5284 0 11600000 5729700 5870100 34433 43 13052 13411 53729 53729 TIEAEAAHGTVTR 13 0 1 Unmodified _TIEAEAAHGTVTR_ 0 0 0 Q13584;Q53GL5;P48735;H0YL11;B4DSZ6 Q13584 Q13584 IDH2 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP], mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.3549 2 678.349323 1354.68409 NaN NaN NaN -0.19494 -0.00013223 NaN NaN NaN NaN 24.563 0.2507 24.563 24.393 24.644 0 0 0 0 0.00013575 1 10238 90.685 53.21 1 NaN NaN 0 2879100 0 2879100 34434 1578 13053 13412 53730 53730 TIEAEAAHGTVTR 13 0 1 Unmodified _TIEAEAAHGTVTR_ 0 0 0 Q13584;Q53GL5;P48735;H0YL11;B4DSZ6 Q13584 Q13584 IDH2 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP], mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.3486 2 678.349323 1354.68409 77462.92 0.2728 0.00018505 0.3885 0.00026354 0.6613 0.00044859 678.349197070266 683.353811475931 24.208 0.30758 24.208 24.053 24.36 0 30 11 4 0 0 0 7.5482E-05 2 9982 94.616 94.616 1 1.9395 1.9942 0 4914900 2307200 2607700 34435 1578 13053 13412 53731;53732 53732 TIEDDLVSALVR 12 0 1 Unmodified _TIEDDLVSALVR_ 0 0 0 F5GY32;A0A024RBS6;F5H1S9;G8JLB3;E5KMT6;E5KMT5;Q9Y606;F5H168;F8W9U5;F5H1B2;F5GXL3 F5GY32 F5GY32 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.8655 2 665.864274 1329.714 NaN NaN NaN -0.45757 -0.00030468 NaN NaN NaN NaN 117.96 0.14164 117.96 117.88 118.02 7.6294E-06 0 0 0 0.0041214 1 77416 76.465 46.655 1 NaN NaN 0 1285800 1285800 0 34436 346 13054 13413 53733 53733 TIEDDLVSALVR 12 0 1 Unmodified _TIEDDLVSALVR_ 0 0 0 F5GY32;A0A024RBS6;F5H1S9;G8JLB3;E5KMT6;E5KMT5;Q9Y606;F5H168;F8W9U5;F5H1B2;F5GXL3 F5GY32 F5GY32 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8691 2 665.864274 1329.714 NaN NaN NaN 0.0035101 2.3373E-06 NaN NaN NaN NaN 117.86 0.4295 117.86 117.65 118.08 0 0 0 0 0.00077045 1 77463 85.377 54.807 1 NaN NaN 0 2625000 0 2625000 34437 346 13054 13413 53734 53734 TIEELQQK 8 1 0 Unmodified _TIEELQQK_ 0 0 0 CON__Q14525;Q14525;Q6A165;CON__Q9UE12;CON__Q15323;CON__A2A5Y0;CON__O76014;CON__REFSEQ:XP_986630;Q15323;Q14532;O76014;CON__Q9D646;CON__O76011;A0A140TA62;CON__Q6NTB9;CON__O76009;CON__Q8IUT8;A0A140TA69;O76009;O76011 CON__Q14525 CON__Q14525 KRT33B;KRTHA7;KRT31;KRT32;KRT37;KRT33A;KRT34 Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha2;Keratin, type I cuticular Ha7;Keratin, type I cuticular Ha3-I;Keratin, type I cuticular Ha4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.7769 2 494.769114 987.523675 NaN NaN NaN 0.84336 0.00041727 NaN NaN NaN NaN 33.384 0.34703 33.384 33.241 33.588 0 0 0 0 0.03531 1 14603 56.011 0.48013 1 NaN NaN 0 1838000 0 1838000 + 34438 1169 13055 13414 53735 53735 TIEESEETLK 10 1 0 Unmodified _TIEESEETLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.7932 2 589.792983 1177.57141 78605.98 0.81595 0.00048124 -0.098912 -5.8337E-05 0.71704 0.00042291 589.793015957385 593.799844573687 33.64 1.3215 33.64 33.052 34.374 0 552 127 6 0 0 0 0.0032991 2 16793 65.157 34.991 1 0.93162 1.0485 0 119080000 60456000 58628000 34439 69 13056 13415 53736;53737 53737 TIEESEETLK 10 1 0 Unmodified _TIEESEETLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.802 2 589.792983 1177.57141 77295.7 0.47006 0.00027724 0.32961 0.0001944 0.79967 0.00047164 589.793298267718 593.80007601124 33.172 1.2153 33.172 32.488 33.703 3.8147E-06 500 107 8 0 0 0 0.0012794 2 16311 74.376 35.414 1 0.92367 1.0701 0 212070000 110610000 101470000 34440 69 13056 13415 53738;53739 53738 TIEESEETLK 10 1 0 Unmodified _TIEESEETLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.7999 2 589.792983 1177.57141 78178.98 0.38766 0.00022864 0.14105 8.319E-05 0.5287 0.00031183 589.793045631059 593.800150180975 38.746 1.7034 38.746 38.324 40.027 0 549 132 7 0 0 0 0.0044036 4 17948 61.56 29.625 1 1.9784 1.6254 0 38295000 12413000 25883000 34441 69 13056 13415 53740;53741;53742;53743 53742 TIEESEETLK 10 1 0 Unmodified _TIEESEETLK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.8002 2 589.792983 1177.57141 79304.87 0.30176 0.00017798 0.059771 3.5253E-05 0.36153 0.00021323 589.793118066901 593.800085667841 38.966 1.4086 38.966 38.586 39.995 0 574 109 7 0 0 0 0.00072198 3 17367 82.287 55.903 1 1.9035 1.5785 0 35350000 12048000 23302000 34442 69 13056 13415 53744;53745;53746 53745 TIELDGK 7 1 0 Unmodified _TIELDGK_ 0 0 0 E9PLD0;Q9H0U4;B7Z8M7;Q6FIG4;Q5U0I6;P62820;Q9H1C9;B3KTE3;H0YMN7;Q59EP4;H0YNE9;B4DMS1;Q92930;A0A024R7I3;P61006 E9PLD0;A0A024R7I3 E9PLD0 RAB1B;RAB1A;RAB8B;RAB8A Ras-related protein Rab-1B;Ras-related protein Rab-1A;Ras-related protein Rab-8B;Ras-related protein Rab-8A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 392.2202 2 388.213443 774.412334 98282.37 0.1485 5.7649E-05 -0.11687 -4.537E-05 0.03163 1.2279E-05 388.213287580531 392.220420546491 30.826 0.48266 30.826 30.605 31.088 0 175 43 6 0 0 0 0.030326 1 15171 68.915 16.232 1 1.7214 1.7849 0 29388000 10544000 18843000 34443 1246;226 13057 13416 53747 53747 TIEQNINNLNVSEADR 16 0 1 Unmodified _TIEQNINNLNVSEADR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 915.9543 2 915.453036 1828.89152 64029.86 0.31314 0.00028666 0.37222 0.00034075 0.68536 0.00062742 915.453706406623 920.457326635108 72.177 0.68419 72.177 71.86 72.544 0 284 51 7 0 0 0 9.5761E-34 3 42101 155.66 155.66 1 0.80323 0.81933 0 30659000 17035000 13624000 34444 740 13058 13417 53748;53749;53750 53750 TIEQNINNLNVSEADR 16 0 1 Unmodified _TIEQNINNLNVSEADR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 915.4533 2 915.453036 1828.89152 63964.7 0.41169 0.00037689 0.47862 0.00043815 0.89031 0.00081504 915.955127548425 920.457248784275 71.162 0.58212 71.162 70.868 71.451 -7.6294E-06 237 41 8 0 0 0 7.0676E-18 4 42455 134.61 134.61 1 0.84398 0.92975 0 41151000 23288000 17863000 34445 740 13058 13417 53751;53752;53753;53754 53753 TIEQNINNLNVSEADR 16 0 1 Unmodified _TIEQNINNLNVSEADR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 915.9544 2 915.453036 1828.89152 63785.13 0.40281 0.00036875 0.20343 0.00018623 0.60624 0.00055499 915.453283463417 920.457239526001 83.089 0.68163 83.089 82.757 83.439 0 235 39 8 0 0 0 0.00021409 1 45139 59.227 59.227 1 1.5573 1.2748 0 13219000 4785200 8433800 34446 740 13058 13417 53755 53755 TIEQNINNLNVSEADR 16 0 1 Unmodified _TIEQNINNLNVSEADR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 920.9607 2 915.453036 1828.89152 63773.06 0.48825 0.00044697 -0.087212 -7.9839E-05 0.40104 0.00036713 915.452998151758 920.456818221732 83.289 0.61389 83.289 83 83.614 0 199 33 8 0 0 0 0.00015279 2 44462 75.102 75.102 1 1.5714 1.2783 0 9805900 4366700 5439100 34447 740 13058 13417 53756;53757 53756 TIEQNINNLNVSEADRK 17 1 1 Unmodified _TIEQNINNLNVSEADRK_ 0 0 1 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.3362 3 653.336104 1956.98648 73589.93 0.83329 0.00054442 -0.082495 -5.3897E-05 0.7508 0.00049052 653.335763287233 659.343709465304 57.552 1.2367 57.552 56.973 58.21 0 606 95 10 0 0 0 5.7756E-26 2 32487 145.62 145.62 1 0.78342 0.94727 0 194910000 110040000 84864000 34448 740 13059 13418 53758;53759 53759 TIEQNINNLNVSEADRK 17 1 1 Unmodified _TIEQNINNLNVSEADRK_ 0 0 1 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.5022 2 979.500517 1956.98648 62359.15 0.35859 0.00035124 0.58161 0.00056969 0.94021 0.00092094 980.002385698167 988.513038119535 57.547 0.58099 57.547 57.189 57.77 3.8147E-06 167 42 5 0 0 0 3.0769E-05 3 32575 86.944 86.944 1 0.75733 0.86684 0 26046000 14051000 11996000 34449 740 13059 13418 53760;53761;53762 53762 TIEQNINNLNVSEADRK 17 1 1 Unmodified _TIEQNINNLNVSEADRK_ 0 0 1 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3353 3 653.336104 1956.98648 74234.05 0.57479 0.00037553 -0.26202 -0.00017119 0.31277 0.00020434 653.670318749092 659.343638281323 56.313 1.2987 56.313 55.724 57.022 0 671 101 12 0 0 0 1.7243E-13 2 32235 121.03 121.03 1 0.79532 0.94084 0 183190000 102660000 80529000 34450 740 13059 13418 53763;53764 53764 TIEQNINNLNVSEADRK 17 1 1 Unmodified _TIEQNINNLNVSEADRK_ 0 0 1 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 988.5121 2 979.500517 1956.98648 61769.58 0.18572 0.00018192 0.24938 0.00024427 0.43511 0.00042619 980.002069879004 988.511903978591 67.354 0.71592 67.354 67.148 67.864 0 324 52 8 0 0 0 0.00011509 1 35036 71.513 71.513 1 1.6104 1.3696 0 9114000 3244400 5869600 34451 740 13059 13418 53765 53765 TIEQNINNLNVSEADRK 17 1 1 Unmodified _TIEQNINNLNVSEADRK_ 0 0 1 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.6708 3 653.336104 1956.98648 73399.96 0.69693 0.00045533 -0.071174 -4.6501E-05 0.62575 0.00040883 653.336263986926 659.34352665938 67.354 1.3096 67.354 67.063 68.373 0 697 93 12 0 0 0 2.1398E-07 2 35045 92.307 92.307 1 1.7754 1.5853 0 72597000 26434000 46163000 34452 740 13059 13418 53766;53767 53766 TIEQNINNLNVSEADRK 17 1 1 Unmodified _TIEQNINNLNVSEADRK_ 0 0 1 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 989.0137 2 979.500517 1956.98648 61696.1 0.077605 7.6014E-05 0.11114 0.00010886 0.18874 0.00018487 980.001992735205 988.511729630302 67.963 0.73586 67.963 67.74 68.476 0 329 55 8 0 0 0 6.4824E-34 1 34600 178.15 178.15 1 1.6797 1.4205 0 10388000 4051700 6336400 34453 740 13059 13418 53768 53768 TIEQNINNLNVSEADRK 17 1 1 Unmodified _TIEQNINNLNVSEADRK_ 0 0 1 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.3439 3 653.336104 1956.98648 74595.02 0.51455 0.00033618 -0.13029 -8.5124E-05 0.38426 0.00025105 653.67042935303 659.343450633652 67.936 1.2776 67.936 67.681 68.958 0 664 93 12 0 0 0 5.4383E-06 2 34862 83.37 83.37 1 1.7708 1.5111 0 66236000 24408000 41828000 34454 740 13059 13418 53769;53770 53770 TIFGSIPDIFDVHTK 15 1 0 Unmodified _TIFGSIPDIFDVHTK_ 0 0 0 Q9H8V3;H7C3G1 Q9H8V3 Q9H8V3 ECT2 Protein ECT2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.3015 3 563.966401 1688.87737 83969.3 0.98445 0.0005552 -0.37793 -0.00021314 0.60652 0.00034206 564.300241524636 566.637856210036 121.55 0.39869 121.55 121.37 121.77 0 79 25 4 0 0 0 0.011255 1 78610 17.8 17.8 1 0.95579 0.9642 0 5473100 2982600 2490500 34455 2043 13060 13419 53771 53771 TIFGSIPDIFDVHTK 15 1 0 Unmodified _TIFGSIPDIFDVHTK_ 0 0 0 Q9H8V3;H7C3G1 Q9H8V3 Q9H8V3 ECT2 Protein ECT2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.967 3 563.966401 1688.87737 83867.33 0.74394 0.00041956 0.075204 4.2413E-05 0.81915 0.00046197 563.966447261474 566.63760577787 120.99 0.51016 120.99 120.72 121.23 -7.6294E-06 99 30 6 0 0 0 0.0021063 1 80003 26.781 26.781 1 1.1343 1.1638 0 9456500 4324100 5132400 34456 2043 13060 13419 53772 53772 TIGGGDDSFNTFFSETGAGK 20 1 0 Unmodified _TIGGGDDSFNTFFSETGAGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;F8VXZ7;F8W0F6;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1008.9594 2 1004.45016 2006.88576 60813.09 0.49294 0.00049514 -0.20272 -0.00020363 0.29022 0.00029151 1004.95149692326 1008.45717445234 106.07 1.7029 106.07 105.63 107.33 0 935 127 13 0 0 0 7.9965E-18 4 66218 121.24 121.24 1 1.6801 2.0034 0 700060000 273570000 426490000 34457 922;1257;1869 13061 13420 53773;53774;53775;53776 53776 TIGGGDDSFNTFFSETGAGK 20 1 0 Unmodified _TIGGGDDSFNTFFSETGAGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;F8VXZ7;F8W0F6;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1008.4573 2 1004.45016 2006.88576 NaN NaN NaN 0.14272 0.00014336 NaN NaN NaN NaN 108.02 0.60263 108.02 107.58 108.18 0 0 0 0 0.011144 1 67459 38.189 38.189 1 NaN NaN 0 4870700 0 4870700 34458 922;1257;1869 13061 13420 53777 53777 TIGGGDDSFNTFFSETGAGK 20 1 0 Unmodified _TIGGGDDSFNTFFSETGAGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;F8VXZ7;F8W0F6;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1008.4601 2 1004.45016 2006.88576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.34 1 107.34 106.84 107.84 0 0 0 0 0.0022861 1 66834 53.001 38.743 1 34459 922;1257;1869 13061 13420 53778 53778 TIGGGDDSFNTFFSETGAGK 20 1 0 Unmodified _TIGGGDDSFNTFFSETGAGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;F8VXZ7;F8W0F6;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1008.457 2 1004.45016 2006.88576 60807.95 0.44947 0.00045147 -0.21509 -0.00021605 0.23438 0.00023542 1004.95145048643 1008.45716730593 105.5 1.7069 105.5 105.07 106.78 0 974 127 13 0 0 0 5.3655E-41 4 67343 160.84 160.84 1 1.6136 1.9034 0 802070000 313780000 488290000 34460 922;1257;1869 13061 13420 53779;53780;53781;53782 53781 TIGGGDDSFNTFFSETGAGK 20 1 0 Unmodified _TIGGGDDSFNTFFSETGAGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;F8VXZ7;F8W0F6;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1008.4599 2 1004.45016 2006.88576 NaN NaN NaN 0.25248 0.0002536 NaN NaN NaN NaN 107.44 0.5467 107.44 107.29 107.84 0 0 0 0 7.9651E-05 1 68589 56.648 51.471 1 NaN NaN 0 4113700 0 4113700 34461 922;1257;1869 13061 13420 53783 53783 TIGGGDDSFNTFFSETGAGK 20 1 0 Unmodified _TIGGGDDSFNTFFSETGAGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;F8VXZ7;F8W0F6;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1004.9471 2 1004.45016 2006.88576 60245.93 0.30924 0.00031062 -0.33578 -0.00033727 -0.026534 -2.6652E-05 1004.95129885065 1008.45698685393 117.39 1.618 117.39 117.07 118.69 -7.6294E-06 490 70 12 0 0 0 2.0479E-09 5 69028 97.417 95.717 1 1.348 1.1747 0 158090000 69889000 88199000 34462 922;1257;1869 13061 13420 53784;53785;53786;53787;53788 53785 TIGGGDDSFNTFFSETGAGK 20 1 0 Unmodified _TIGGGDDSFNTFFSETGAGK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;F8VVB9;B4DN58;F8VRZ4;F8VS66;F8VX09;F8VWV9;F8VRK0;F8VXZ7;F8W0F6;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;Q1ZYQ1;Q13748;Q6PEY2;F8VQQ4 B3KT06;Q53GA7;Q71U36 B3KT06 TUBA1B;TUBA1A;TUBA1C;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1008.4573 2 1004.45016 2006.88576 59779.93 0.21582 0.00021678 -0.15775 -0.00015846 0.058064 5.8322E-05 1004.95145640628 1008.45716754714 117.27 1.4526 117.27 116.99 118.45 -7.6294E-06 520 67 14 0 0 0 1.6389E-17 3 68033 116.96 116.96 1 1.3779 1.1841 0 153970000 62816000 91153000 34463 922;1257;1869 13061 13420 53789;53790;53791 53789 TIGGGDDSFTTFFCETGAGK 20 1 0 Unmodified _TIGGGDDSFTTFFCETGAGK_ 0 0 0 P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 P68366 P68366 TUBA4A Tubulin alpha-4A chain MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1038.5027 2 1034.45184 2066.88914 60817.92 0.69514 0.00071909 -0.30429 -0.00031477 0.39086 0.00040432 1034.95343369248 1038.45908536463 111.27 0.63856 111.27 110.96 111.6 0 229 44 8 0 0 0 0.0058733 1 70054 38.799 38.799 1 1.661 1.6901 0 18007000 7072200 10935000 34464 1659 13062 13421 53792 53792 TIGGGDDSFTTFFCETGAGK 20 1 0 Unmodified _TIGGGDDSFTTFFCETGAGK_ 0 0 0 P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 P68366 P68366 TUBA4A Tubulin alpha-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1038.4589 2 1034.45184 2066.88914 61007.32 0.39283 0.00040636 0.090848 9.3978E-05 0.48368 0.00050034 1034.95366347131 1038.45912569379 110.78 0.57439 110.78 110.48 111.05 0 208 43 6 0 0 0 4.4047E-06 1 71321 58.831 56.135 1 1.9242 1.9852 0 18289000 7663000 10626000 34465 1659 13062 13421 53793 53793 TIGGGDDSFTTFFCETGAGK 20 1 0 Unmodified _TIGGGDDSFTTFFCETGAGK_ 0 0 0 P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 P68366 P68366 TUBA4A Tubulin alpha-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1034.4557 2 1034.45184 2066.88914 60361.29 0.6757 0.00069898 0.67545 0.00069873 1.3512 0.0013977 1034.45322249842 1038.45888994587 122.2 0.55795 122.2 121.97 122.53 7.6294E-06 103 28 5 0 0 0 0.031477 1 71881 22.214 22.214 1 0.9801 0.80309 0 8696700 5083500 3613200 34466 1659 13062 13421 53794 53794 TIGISVDPR 9 0 1 Unmodified _TIGISVDPR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.276 2 479.271824 956.529095 86838.95 -0.066714 -3.1974E-05 -0.22917 -0.00010983 -0.29588 -0.00014181 479.271672334153 484.275820826193 62.062 1.9777 62.062 61.615 63.593 0 851 180 8 0 0 0 0.019545 1 35430 51.066 28.829 1 0.96413 1.1425 0 490850000 253720000 237130000 34467 733 13063 13422 53795 53795 TIGISVDPR 9 0 1 Unmodified _TIGISVDPR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2716 2 479.271824 956.529095 86523.27 0.010297 4.9353E-06 -0.14138 -6.776E-05 -0.13108 -6.2825E-05 479.271772967102 484.275785095023 60.901 1.8968 60.901 60.372 62.269 0 909 169 8 0 0 0 9.0351E-05 2 35921 110.41 66.013 1 0.91186 1.0626 0 460650000 237330000 223320000 34468 733 13063 13422 53796;53797 53797 TIGISVDPR 9 0 1 Unmodified _TIGISVDPR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.2757 2 479.271824 956.529095 NaN NaN NaN -0.007417 -3.5548E-06 NaN NaN NaN NaN 71.06 2.0545 71.06 70.819 72.874 0 0 0 0 0.046103 1 37361 48.283 27.658 1 NaN NaN 0 25182000 0 25182000 34469 733 13063 13422 53798 53798 TIGISVDPR 9 0 1 Unmodified _TIGISVDPR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.2761 2 479.271824 956.529095 87378.29 -0.12387 -5.9366E-05 0.24871 0.0001192 0.12484 5.9832E-05 479.272225192942 484.275897839681 71.548 2.2868 71.548 71.179 73.466 0 647 171 7 0 0 0 0.017716 1 36803 52.716 30.224 1 0.82705 0.72155 0 50992000 26640000 24351000 34470 733 13063 13422 53799 53799 TIGTGLVTNTLAMTEEEK 18 1 0 Oxidation (M) _TIGTGLVTNTLAM(ox)TEEEK_ TIGTGLVTNTLAM(1)TEEEK TIGTGLVTNTLAM(105.03)TEEEK 0 1 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.4892 2 962.482613 1922.95067 59665.63 0.23061 0.00022196 -0.57496 -0.00055338 -0.34434 -0.00033142 962.983337284329 966.489800415516 94.961 0.94441 94.961 94.458 95.403 0 226 80 5 0 0 0 4.8736E-12 2 57380 105.03 97.573 1 2.4186 2.6301 0 47896000 11704000 36192000 34471 1580 13064 13423 53800;53801 53800 1359 TIGTGLVTNTLAMTEEEK 18 1 0 Oxidation (M) _TIGTGLVTNTLAM(ox)TEEEK_ TIGTGLVTNTLAM(1)TEEEK TIGTGLVTNTLAM(58.1)TEEEK 0 1 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.9888 2 962.482613 1922.95067 NaN NaN NaN -0.43077 -0.00041461 NaN NaN NaN NaN 93.904 1.0767 93.904 93.599 94.676 0 0 0 0 0.00017397 1 58164 58.098 52.375 1 NaN NaN 0 30696000 0 30696000 34472 1580 13064 13423 53802 53802 1359 TIGTGLVTNTLAMTEEEK 18 1 0 Oxidation (M) _TIGTGLVTNTLAM(ox)TEEEK_ TIGTGLVTNTLAM(1)TEEEK TIGTGLVTNTLAM(115.12)TEEEK 0 1 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.4901 2 962.482613 1922.95067 NaN NaN NaN 0.061061 5.877E-05 NaN NaN NaN NaN 94.308 0.64712 94.308 94.133 94.78 0 0 0 0 5.9013E-18 1 58702 115.12 104.51 1 NaN NaN 0 27851000 0 27851000 34473 1580 13064 13423 53803 53803 1359 TIHAELSK 8 1 0 Unmodified _TIHAELSK_ 0 0 0 B2R8G6;A0A024R7P2;B7Z6M0;Q14318;U3KQ64;A0A0A0MTJ1 B2R8G6 B2R8G6 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 449.753 2 449.753267 897.491981 89342.66 -0.072267 -3.2502E-05 -0.64546 -0.0002903 -0.71773 -0.0003228 449.752667574099 453.760242038363 20.77 0.46639 20.77 20.627 21.094 0 63 21 5 0 0 0 0.0061246 1 7160 88.294 49.875 1 1.1631 1.1823 0 27904000 12527000 15377000 34474 232 13065 13424 53804 53804 TIHVMPDTPEIMLAK 15 1 0 Oxidation (M) _TIHVM(ox)PDTPEIMLAK_ TIHVM(0.987)PDTPEIM(0.013)LAK TIHVM(18.89)PDTPEIM(-18.89)LAK 0 1 0 A0A087X1N7;P20929 A0A087X1N7 A0A087X1N7 NEB Nebulin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.4528 2 856.441508 1710.86846 NaN NaN NaN -0.63159 -0.00054092 NaN NaN NaN NaN 116.61 0.93817 116.61 116.08 117.02 0 0 0 0 0.0060617 1 76264 42.743 6.3188 2 NaN NaN 0 106520000 0 106520000 34475 450 13066 13425 53805 53805 315 TIIFCETK 8 1 0 Unmodified _TIIFCETK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.2703 2 506.26261 1010.51067 85859.14 0.23471 0.00011882 0.21864 0.00011069 0.45335 0.00022951 506.262620067526 510.269886666756 56.153 1.0782 56.153 55.724 56.802 3.8147E-06 264 83 5 0 0 0 0.014638 1 32227 62.546 37.652 1 1.0804 1.1166 0 32940000 14416000 18524000 34476 2065 13067 13426 53806 53806 TIIFCETK 8 1 0 Unmodified _TIIFCETK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.2702 2 506.26261 1010.51067 84347.73 0.55867 0.00028283 -0.16448 -8.3269E-05 0.39419 0.00019956 506.262590432882 510.269607815137 65.595 1.0755 65.595 65.255 66.33 0 286 75 4 0 0 0 0.013467 1 33842 65.246 55.335 1 1.1532 0.91443 0 4638200 1913000 2725200 34477 2065 13067 13426 53807 53807 TIIFCETK 8 1 0 Unmodified _TIIFCETK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.2701 2 506.26261 1010.51067 86426.72 0.24625 0.00012467 0.26139 0.00013233 0.50764 0.000257 506.262801703852 510.269861825332 65.958 1.3184 65.958 65.49 66.808 0 341 97 6 0 0 0 0.022631 1 33285 57.047 44.691 1 1.1745 0.92201 0 3820900 1775500 2045400 34478 2065 13067 13426 53808 53808 TIIFCETKK 9 2 0 Unmodified _TIIFCETKK_ 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.3215 2 570.310092 1138.60563 NaN NaN NaN -2.7484 -0.0015674 NaN NaN NaN NaN 55.161 0.22189 55.161 55 55.222 0 0 0 0 0.027149 1 30995 54.549 2.695 1 NaN NaN 0 4066900 0 4066900 34479 2065 13068 13427 53809 53809 TIIGQQGDQSCANK 14 1 0 Unmodified _TIIGQQGDQSCANK_ 0 0 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 760.3629 2 760.362104 1518.70965 69721.1 0.50117 0.00038107 -0.12009 -9.1315E-05 0.38107 0.00028975 760.362026212658 764.369455582642 26.597 0.4376 26.597 26.421 26.859 0 89 19 7 0 0 0 0.00049381 2 10058 60.434 60.434 1 0.55489 0.45187 0 2672500 1623200 1049300 34480 1542 13069 13428 53810;53811 53811 TIIMWK 6 1 0 Oxidation (M) _TIIM(ox)WK_ TIIM(1)WK TIIM(54.54)WK 0 1 0 E9KL35;P63244;D6RAC2;D6RHH4;D6R9Z1;D6R9L0;D6REE5;B4DVD2;D6RBD0;D6RFZ9;D6RAU2;E9PD14;B4E0C3;D6RGK8;D6R909;B4DWC6;I3QNU9 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.2326 2 404.2253 806.436046 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.037 1 61.037 60.537 61.537 0 0 0 0 0.052344 1 34876 54.537 9.7339 1 34481 1227 13070 13429 53812 53812 939 TIIMWK 6 1 0 Oxidation (M) _TIIM(ox)WK_ TIIM(1)WK TIIM(58.66)WK 0 1 0 E9KL35;P63244;D6RAC2;D6RHH4;D6R9Z1;D6R9L0;D6REE5;B4DVD2;D6RBD0;D6RFZ9;D6RAU2;E9PD14;B4E0C3;D6RGK8;D6R909;B4DWC6;I3QNU9 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.7341 2 404.2253 806.436046 96433.09 0.080182 3.2412E-05 -0.16403 -6.6306E-05 -0.08385 -3.3894E-05 404.225160877175 408.232283203645 59.779 0.58251 59.779 59.523 60.105 -7.6294E-06 134 49 4 0 0 0 0.039158 1 34739 58.661 41.734 1 1.9773 2.0142 0 12299000 3957200 8341500 34482 1227 13070 13429 53813 53813 939 TIIQNPTDQQK 11 1 0 Unmodified _TIIQNPTDQQK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08;F8VR77 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.3479 2 643.340966 1284.66738 76209.32 0.71029 0.00045696 -0.74771 -0.00048103 -0.037423 -2.4076E-05 643.340797119113 647.348139772904 33.8 0.50426 33.8 33.54 34.044 0 152 40 6 0 0 0 0.00092259 1 16874 71.451 52.18 1 2.5161 2.7676 0 42456000 11263000 31192000 34483 328 13071 13430 53814 53814 TIIQNPTDQQK 11 1 0 Unmodified _TIIQNPTDQQK_ 0 0 0 A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80;Q05D08;F8VR77 A8K6Y1 A8K6Y1 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 647.3489 2 643.340966 1284.66738 NaN NaN NaN -0.075733 -4.8722E-05 NaN NaN NaN NaN 39.229 0.58346 39.229 38.977 39.561 0 0 0 0 0.011209 2 17800 57.598 36.697 1 NaN NaN 0 2203700 0 2203700 34484 328 13071 13430 53815;53816 53815 TILEEEITPTIQK 13 1 0 Unmodified _TILEEEITPTIQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q6P712;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.9201 2 757.919246 1513.82394 70013.69 0.49825 0.00037763 0.29058 0.00022023 0.78882 0.00059786 757.919512262922 761.926531682681 88.962 1.2268 88.962 88.621 89.848 0 625 100 10 0 0 0 1.0011E-18 5 54008 141.95 124.52 1 0.81499 0.95821 0 314000000 156890000 157110000 34485 69 13072 13431 53817;53818;53819;53820;53821 53819 TILEEEITPTIQK 13 1 0 Unmodified _TILEEEITPTIQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q6P712;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.9272 2 757.919246 1513.82394 70254.18 0.59032 0.00044741 0.039669 3.0066E-05 0.62999 0.00047748 757.919313549818 761.926297592051 88.171 1.0741 88.171 87.794 88.868 0 545 91 8 0 0 0 2.3253E-13 4 54246 128.01 110.58 1 0.83546 0.97615 0 281430000 153050000 128390000 34486 69 13072 13431 53822;53823;53824;53825 53823 TILEEEITPTIQK 13 1 0 Unmodified _TILEEEITPTIQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q6P712;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.9202 2 757.919246 1513.82394 70187.01 0.55104 0.00041765 0.068682 5.2055E-05 0.61973 0.0004697 757.9192677764 761.92635448266 102.01 1.6243 102.01 101.57 103.2 0 651 113 9 0 0 0 6.5436E-06 4 57659 104.43 104.43 1 1.7506 1.5027 0 81772000 30202000 51570000 34487 69 13072 13431 53826;53827;53828;53829 53826 TILEEEITPTIQK 13 1 0 Unmodified _TILEEEITPTIQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q6P712;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.9261 2 757.919246 1513.82394 70105.3 0.53541 0.0004058 -0.019842 -1.5039E-05 0.51557 0.00039076 757.919295001559 761.926259208679 101.84 1.7594 101.84 101.4 103.16 0 746 124 9 0 0 0 1.3172E-13 4 56738 132.32 122.09 1 1.8316 1.5603 0 88190000 30938000 57252000 34488 69 13072 13431 53830;53831;53832;53833 53831 TILEEEITPTIQK 13 1 0 Unmodified _TILEEEITPTIQK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q6P712;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.9279 2 757.919246 1513.82394 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.32 1 103.32 102.82 103.82 0 0 0 0 0.017104 1 57854 49.5 23.562 1 34489 69 13072 13431 53834 53834 TILMMGR 7 0 1 2 Oxidation (M) _TILM(ox)M(ox)GR_ TILM(1)M(1)GR TILM(44.72)M(44.72)GR 0 2 0 P13639;Q8TA90;Q6PK56;B4DRE8 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.2223 2 427.217149 852.419744 NaN NaN NaN 0.1682 7.1858E-05 NaN NaN NaN NaN 26.089 0.529 26.089 25.923 26.452 0 0 0 0 0.016598 1 11542 44.721 16.298 1 NaN NaN 0 12523000 0 12523000 34490 1478 13073 13432 53835 53835 1232;1233 TILSNQTVDIPENVDITLK 19 1 0 Unmodified _TILSNQTVDIPENVDITLK_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1057.0735 2 1057.07298 2112.13141 58696.19 0.78015 0.00082468 -0.035069 -3.707E-05 0.74508 0.00078761 1057.57474530867 1061.58122773573 114.98 1.2893 114.98 114.37 115.66 0 592 86 12 0 0 0 1.6923E-08 4 72893 96.734 96.734 1 0.94013 1.1341 0 1479500000 764650000 714890000 34491 1537 13074 13433 53836;53837;53838;53839 53836 TILSNQTVDIPENVDITLK 19 1 0 Unmodified _TILSNQTVDIPENVDITLK_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1061.0804 2 1057.07298 2112.13141 58704.82 0.66965 0.00070787 -0.33972 -0.00035911 0.32993 0.00034876 1057.57419650818 1061.58106473295 114.55 0.99026 114.55 114.16 115.15 -7.6294E-06 514 65 13 0 0 0 1.1279E-17 3 74367 124.45 124.45 1 0.95222 1.1223 0 629230000 329530000 299700000 34492 1537 13074 13433 53840;53841;53842 53841 TILSNQTVDIPENVDITLK 19 1 0 Unmodified _TILSNQTVDIPENVDITLK_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1057.0724 2 1057.07298 2112.13141 62961.88 0.64483 0.00068163 0.038833 4.1049E-05 0.68366 0.00072268 1057.07294097985 1061.07962915891 115.24 0.21205 115.24 115.12 115.33 0 38 13 6 0 0 0 0.0096478 1 75181 26.627 26.627 1 0.90153 0.92293 0 11872000 7462600 4409400 34493 1537 13074 13433 53843 53843 TILSNQTVDIPENVDITLK 19 1 0 Unmodified _TILSNQTVDIPENVDITLK_ 0 0 0 Q53Z07;P32969;E7ESE0;D6RAN4;B4E1M5;B4DLV8 Q53Z07 Q53Z07 RPL9 60S ribosomal protein L9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1061.5836 2 1057.07298 2112.13141 59655.86 0.40636 0.00042955 0.36188 0.00038253 0.76823 0.00081208 1057.57485727219 1061.58180463103 126.53 1.4155 126.53 126.24 127.65 0 396 55 11 0 0 0 2.1149E-05 3 76007 61.167 61.167 1 1.048 0.90958 0 132570000 64988000 67578000 34494 1537 13074 13433 53844;53845;53846 53844 TINAGEELTFDYQMK 15 1 0 Oxidation (M) _TINAGEELTFDYQM(ox)K_ TINAGEELTFDYQM(1)K TINAGEELTFDYQM(62.41)K 0 1 0 Q9H5I1;Q5JSS2;H0Y306 Q9H5I1 Q9H5I1 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.9215 2 888.411459 1774.80837 NaN NaN NaN 0.30048 0.00026695 NaN NaN NaN NaN 85.006 0.42036 85.006 84.827 85.248 7.6294E-06 0 0 0 0.00083235 1 51089 62.408 53.826 1 NaN NaN 0 7265400 0 7265400 34495 2036 13075 13434 53847 53847 1871 TINLYPLTNYTFGTK 15 1 0 Unmodified _TINLYPLTNYTFGTK_ 0 0 0 B2R6U8;A0A024R6W2;O43809;Q5HYH5 B2R6U8 B2R6U8 NUDT21;DKFZp313O211 Cleavage and polyadenylation specificity factor subunit 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.9676 2 873.45907 1744.90359 67518.16 0.96572 0.00084352 -0.027697 -2.4193E-05 0.93803 0.00081933 873.960512384387 877.466086599621 117.16 0.4488 117.16 116.99 117.44 0 117 33 6 0 0 0 0.026418 1 75027 28.764 18.439 1 1.1045 1.0927 0 8335200 4503300 3831900 34496 209 13076 13435 53848 53848 TIPDVFPHLPLIAITR 16 0 1 Unmodified _TIPDVFPHLPLIAITR_ 0 0 0 K7EJE8;K7EKE6;B3KU28 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.0256 3 601.68909 1802.04544 NaN NaN NaN 0.023637 1.4222E-05 NaN NaN NaN NaN 128.37 0.48994 128.37 127.91 128.4 0 0 0 0 0.0048095 1 85774 42.314 38.135 1 NaN NaN 0 4470900 0 4470900 34497 946 13077 13436 53849 53849 TIPLTDNTVIEEHLGK 16 1 0 Unmodified _TIPLTDNTVIEEHLGK_ 0 0 0 A0A024RD36;Q6DKI1;B3KMP5;A8K5J5 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.9932 3 593.987753 1778.94143 78014.3 0.62226 0.00036961 0.33179 0.00019708 0.95405 0.00056669 593.987782574426 596.659643713971 87.854 0.99113 87.854 87.415 88.406 0 444 88 7 0 0 0 3.7888E-05 2 52803 77.562 72.932 1 0.86354 0.97438 0 110550000 58282000 52273000 34498 378 13078 13437 53850;53851 53851 TIPLTDNTVIEEHLGK 16 1 0 Unmodified _TIPLTDNTVIEEHLGK_ 0 0 0 A0A024RD36;Q6DKI1;B3KMP5;A8K5J5 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 890.4793 2 890.477991 1778.94143 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.695 1 87.695 87.195 88.195 7.6294E-06 0 0 0 0.012943 1 52904 50.897 35.997 1 34499 378 13078 13437 53852 53852 TIPLTDNTVIEEHLGK 16 1 0 Unmodified _TIPLTDNTVIEEHLGK_ 0 0 0 A0A024RD36;Q6DKI1;B3KMP5;A8K5J5 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.4855 2 890.477991 1778.94143 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.717 1 87.717 87.217 88.217 0 0 0 0 0.00013046 1 52915 84.169 51.17 1 34500 378 13078 13437 53853 53853 TIPLTDNTVIEEHLGK 16 1 0 Unmodified _TIPLTDNTVIEEHLGK_ 0 0 0 A0A024RD36;Q6DKI1;B3KMP5;A8K5J5 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.6594 3 593.987753 1778.94143 78323.6 0.47973 0.00028495 0.096394 5.7257E-05 0.57612 0.00034221 594.322166166576 596.659302452256 86.743 1.0444 86.743 86.411 87.455 0 457 88 8 0 0 0 1.345E-05 3 53345 84.14 78.058 1 0.90392 1.0167 0 119840000 59972000 59865000 34501 378 13078 13437 53854;53855;53856 53855 TIPLTDNTVIEEHLGK 16 1 0 Unmodified _TIPLTDNTVIEEHLGK_ 0 0 0 A0A024RD36;Q6DKI1;B3KMP5;A8K5J5 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.4862 2 890.477991 1778.94143 NaN NaN NaN -0.14521 -0.00012931 NaN NaN NaN NaN 86.767 0.20303 86.767 86.634 86.837 0 0 0 0 5.6699E-26 1 53441 135.6 80.198 1 NaN NaN 0 7089700 0 7089700 34502 378 13078 13437 53857 53857 TIPLTDNTVIEEHLGK 16 1 0 Unmodified _TIPLTDNTVIEEHLGK_ 0 0 0 A0A024RD36;Q6DKI1;B3KMP5;A8K5J5 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 596.6595 3 593.987753 1778.94143 79181.27 0.33604 0.0001996 0.14359 8.529E-05 0.47963 0.00028489 594.322114275969 596.659309338781 100.54 1.0014 100.54 100.24 101.25 0 415 74 8 0 0 0 0.00062061 2 56842 42.708 38.159 1 1.1276 0.90825 0 22144000 10497000 11646000 34503 378 13078 13437 53858;53859 53859 TIPLTDNTVIEEHLGK 16 1 0 Unmodified _TIPLTDNTVIEEHLGK_ 0 0 0 A0A024RD36;Q6DKI1;B3KMP5;A8K5J5 A0A024RD36 A0A024RD36 RPL7L1 60S ribosomal protein L7-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 596.9935 3 593.987753 1778.94143 79354.04 0.47744 0.00028359 0.059097 3.5103E-05 0.53654 0.0003187 594.322012108144 596.659289254494 100.28 0.92717 100.28 100.06 100.98 0 404 72 8 0 0 0 0.00076523 2 55816 40.693 33.811 1 1.056 0.84651 0 19410000 8995400 10415000 34504 378 13078 13437 53860;53861 53861 TIPNDPGFVVTLSNR 15 0 1 Unmodified _TIPNDPGFVVTLSNR_ 0 0 0 Q93009;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.4369 2 815.433387 1628.85222 69801.16 0.94586 0.00077128 0.44537 0.00036317 1.3912 0.0011345 815.935030135128 820.437404061898 100.95 0.7225 100.95 100.66 101.38 0 239 53 6 0 0 0 6.9543E-05 2 61856 84.289 84.289 1 0.59993 0.6081 0 28531000 15765000 12766000 34505 1954 13079 13438 53862;53863 53862 TIPNDPGFVVTLSNR 15 0 1 Unmodified _TIPNDPGFVVTLSNR_ 0 0 0 Q93009;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.4346 2 815.433387 1628.85222 69295.05 0.78304 0.00063852 0.54015 0.00044046 1.3232 0.001079 815.934953850282 820.940282943707 100.32 0.66797 100.32 100.01 100.68 -7.6294E-06 242 55 6 0 0 0 7.3119E-06 1 62889 95.018 95.018 1 0.68502 0.75568 0 41464000 24536000 16928000 34506 1954 13079 13438 53864 53864 TIPNDPGFVVTLSNR 15 0 1 Unmodified _TIPNDPGFVVTLSNR_ 0 0 0 Q93009;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.4396 2 815.433387 1628.85222 69151.28 1.0499 0.00085614 0.5553 0.00045281 1.6052 0.001309 815.433651332326 820.4376387738 113.31 0.68182 113.31 113 113.68 -7.6294E-06 164 33 6 0 0 0 0.00070048 2 65844 51.875 51.875 1 0.86338 0.73669 0 5647300 2558400 3088800 34507 1954 13079 13438 53865;53866 53865 TIPNDPGFVVTLSNR 15 0 1 Unmodified _TIPNDPGFVVTLSNR_ 0 0 0 Q93009;Q6U8A4;B7Z855;H3BND8;B7Z7T5 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 815.4357 2 815.433387 1628.85222 68827.25 0.75505 0.00061569 0.62143 0.00050673 1.3765 0.0011224 815.433944605037 820.437797302834 113.13 0.71165 113.13 112.83 113.54 7.6294E-06 155 34 6 0 0 0 0.00031303 2 64905 60.161 60.161 1 0.9329 0.774 0 5507300 2468700 3038600 34508 1954 13079 13438 53867;53868 53868 TIPSWATLSASQLAR 15 0 1 Unmodified _TIPSWATLSASQLAR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.4394 2 801.435929 1600.85731 67514.45 1.2985 0.0010407 0.26051 0.00020878 1.559 0.0012494 801.436935335651 806.440492321289 108.61 0.92976 108.61 108.29 109.22 0 336 63 8 0 0 0 0.00021959 1 67715 63.091 63.091 1 0.57626 0.67864 0 236980000 147190000 89794000 34509 1817 13080 13439 53869 53869 TIPSWATLSASQLAR 15 0 1 Unmodified _TIPSWATLSASQLAR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.4402 2 801.435929 1600.85731 68089.16 0.78756 0.00063118 0.068141 5.4611E-05 0.8557 0.00068579 801.436826574034 806.440467940729 108.05 0.92906 108.05 107.67 108.6 0 414 62 10 0 0 0 0.00077776 2 68878 50.222 47.712 1 0.57048 0.65076 0 141220000 89193000 52027000 34510 1817 13080 13439 53870;53871 53870 TIPSWATLSASQLAR 15 0 1 Unmodified _TIPSWATLSASQLAR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 806.4423 2 801.435929 1600.85731 66980.93 0.64427 0.00051634 -1.3383 -0.0010725 -0.69399 -0.00055619 801.43640559906 806.440228347752 120 1.4356 120 119.69 121.12 0 419 68 10 0 0 0 0.0002193 4 70997 74.46 74.46 1 0.7831 0.67463 0 62802000 32698000 30104000 34511 1817 13080 13439 53872;53873;53874;53875 53872 TIPSWATLSASQLAR 15 0 1 Unmodified _TIPSWATLSASQLAR_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 801.9381 2 801.435929 1600.85731 66891.02 0.71232 0.00057088 -1.4011 -0.0011229 -0.68875 -0.00055199 801.436123177165 806.440077290983 119.77 1.2172 119.77 119.43 120.65 7.6294E-06 389 60 10 0 0 0 0.0001089 4 69985 93.959 93.959 1 0.75978 0.66308 0 75413000 40382000 35031000 34512 1817 13080 13439 53876;53877;53878;53879 53877 TIPVILDGK 9 1 0 Unmodified _TIPVILDGK_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2944 2 478.294768 954.574983 89025.96 0.11514 5.5071E-05 0.41533 0.00019865 0.53047 0.00025372 478.29481127746 482.301931433132 80.913 0.91255 80.913 80.642 81.555 0 292 77 5 0 0 0 0.010772 2 48169 58.981 33.244 1 0.98 1.0399 0 31491000 15896000 15595000 34513 1933 13081 13440 53880;53881 53881 TIPVILDGK 9 1 0 Unmodified _TIPVILDGK_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.3019 2 478.294768 954.574983 88972.27 0.31748 0.00015185 0.34308 0.0001641 0.66056 0.00031594 478.294779243057 482.301959908693 79.991 1.2109 79.991 79.477 80.688 0 314 96 5 0 0 0 0.0043738 2 48558 69.423 43.687 1 0.91751 0.98058 0 36837000 19815000 17022000 34514 1933 13081 13440 53882;53883 53883 TIQAHEGFVR 10 0 1 Unmodified _TIQAHEGFVR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 386.54 3 386.540245 1156.59891 95943.94 0.27312 0.00010557 -0.15861 -6.1311E-05 0.11451 4.4263E-05 386.54027342966 389.876024585528 28.909 0.5175 28.909 28.7 29.218 0 139 27 8 0 0 0 0.024825 1 13763 26.118 20.083 1 1.0821 1.2106 0 88325000 49265000 39060000 34515 402 13082 13441 53884 53884 TIQAHEGFVR 10 0 1 Unmodified _TIQAHEGFVR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 386.54 3 386.540245 1156.59891 95164.2 0.19505 7.5396E-05 0.11146 4.3084E-05 0.30651 0.00011848 386.540304004517 389.87626109423 28.101 0.46849 28.101 27.818 28.286 0 139 24 8 0 0 0 0.0018792 1 13170 60.518 60.518 1 1.0432 1.1898 0 96011000 39739000 56272000 34516 402 13082 13441 53885 53885 TIQAHEGFVR 10 0 1 Unmodified _TIQAHEGFVR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 389.8763 3 386.540245 1156.59891 95006.41 -0.017512 -6.7692E-06 -0.20853 -8.0605E-05 -0.22604 -8.7374E-05 386.540154312801 389.876198621656 32.607 0.46585 32.607 32.43 32.896 0 120 22 8 0 0 0 0.012125 2 14110 32.523 26.488 1 1.4477 1.1811 0 14753000 5748300 9004900 34517 402 13082 13441 53886;53887 53886 TIQAHEGFVR 10 0 1 Unmodified _TIQAHEGFVR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.3068 2 579.306729 1156.59891 79968.05 0.41724 0.00024171 -0.73357 -0.00042496 -0.31633 -0.00018325 579.306603596578 584.310792014603 32.615 0.48176 32.615 32.44 32.921 -3.8147E-06 103 21 7 0 0 0 0.00073926 2 13620 82.008 72.021 1 1.4424 1.1999 0 7354600 2753100 4601400 34518 402 13082 13441 53888;53889 53889 TIQAHEGFVR 10 0 1 Unmodified _TIQAHEGFVR_ 0 0 0 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 A0A087WT20 DCAF13 DDB1- and CUL4-associated factor 13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 389.876 3 386.540245 1156.59891 95400.53 0.065983 2.5505E-05 -0.27179 -0.00010506 -0.20581 -7.9554E-05 386.540158416131 389.876057970779 32.626 0.66535 32.626 32.44 33.105 0 138 32 8 0 0 0 0.024825 2 13593 26.118 26.118 1 1.3863 1.1341 0 9082000 3428600 5653400 34519 402 13082 13441 53890;53891 53890 TIQFVDWCPTGFK 13 1 0 Unmodified _TIQFVDWCPTGFK_ 0 0 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 Q53GA7;Q71U36 Q71U36 TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.895 2 799.887226 1597.7599 67497.55 0.98193 0.00078544 -0.058435 -4.6741E-05 0.9235 0.0007387 799.887372770331 804.395803042276 114.07 0.97804 114.07 113.76 114.74 0 348 70 7 0 0 0 9.1829E-05 2 72275 93.258 93.258 1 1.0787 1.1723 0 47162000 21350000 25813000 34520 1257;1869 13083 13442 53892;53893 53892 TIQFVDWCPTGFK 13 1 0 Unmodified _TIQFVDWCPTGFK_ 0 0 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 Q53GA7;Q71U36 Q71U36 TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.8868 2 799.887226 1597.7599 68081.55 0.67905 0.00054316 0.096502 7.7191E-05 0.77555 0.00062036 799.887330373201 803.894528721946 113.52 1.0685 113.52 113.17 114.23 0 386 77 8 0 0 0 2.8378E-05 2 73551 116.77 116.77 1 1.1154 1.2243 0 41454000 19732000 21722000 34521 1257;1869 13083 13442 53894;53895 53894 TIQFVDWCPTGFK 13 1 0 Unmodified _TIQFVDWCPTGFK_ 0 0 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 Q53GA7;Q71U36 Q71U36 TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.8957 2 799.887226 1597.7599 67920.7 0.76855 0.00061475 0.20569 0.00016453 0.97424 0.00077928 799.887385667417 803.894623431787 125.15 0.94161 125.15 124.88 125.82 0 208 38 8 0 0 0 8.5065E-06 2 75141 101.95 101.95 1 1.1636 0.9346 0 7795600 3503600 4292000 34522 1257;1869 13083 13442 53896;53897 53896 TIQFVDWCPTGFK 13 1 0 Unmodified _TIQFVDWCPTGFK_ 0 0 0 Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 Q53GA7;Q71U36 Q71U36 TUBA1C;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.8948 2 799.887226 1597.7599 68158.86 0.74461 0.0005956 0.050744 4.059E-05 0.79535 0.00063619 799.887327631142 803.894748638501 125.01 0.88636 125.01 124.75 125.64 0 182 39 7 0 0 0 1.9332E-05 2 74116 99.283 99.283 1 1.1452 0.93243 0 7309100 3397200 3911900 34523 1257;1869 13083 13442 53898;53899 53898 TIQGHLQSENFK 12 1 0 Unmodified _TIQGHLQSENFK_ 0 0 0 O15042;E7ET15 O15042 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.368 2 701.35969 1400.70483 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.407 1 32.407 31.907 32.907 0 0 0 0 0.0014398 1 16118 69.721 44.866 1 34524 1374 13084 13443 53900 53900 TIQTIALITYLMEHK 15 1 0 Oxidation (M) _TIQTIALITYLM(ox)EHK_ TIQTIALITYLM(1)EHK TIQTIALITYLM(46.93)EHK 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;A0A0U1RQE1;P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.3347 3 597.662212 1789.96481 79709.73 0.80984 0.00048401 -0.28739 -0.00017176 0.52244 0.00031225 597.996538275643 600.333495142158 116.1 0.64309 116.1 115.77 116.42 -7.6294E-06 184 39 7 0 0 0 0.00043849 1 73942 46.926 46.926 1 1.2678 1.2902 0 14059000 6160200 7898400 34525 695;1595 13085 13444 53901 53901 538 TIQTPIGSTWNTQR 14 0 1 Unmodified _TIQTPIGSTWNTQR_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.9197 2 801.915361 1601.81617 67657.69 0.89437 0.00071721 -0.48167 -0.00038626 0.4127 0.00033095 801.914530033876 806.919258698557 76.532 0.81736 76.532 76.109 76.926 0 326 61 7 0 0 0 2.2927E-14 2 45116 130.56 130.56 1 0.792 0.85462 0 48303000 25299000 23004000 34526 2008;393 13086 13445 53902;53903 53902 TIQTPIGSTWNTQR 14 0 1 Unmodified _TIQTPIGSTWNTQR_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.9157 2 801.915361 1601.81617 67294.16 0.60055 0.00048159 -0.09815 -7.8708E-05 0.5024 0.00040289 801.914906745504 806.919341557738 75.477 0.87133 75.477 75.074 75.946 0 314 69 6 0 0 0 5.8736E-38 2 45547 172.17 172.17 1 0.81716 0.90173 0 41535000 21462000 20073000 34527 2008;393 13086 13445 53904;53905 53905 TIQTPIGSTWNTQR 14 0 1 Unmodified _TIQTPIGSTWNTQR_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 806.92 2 801.915361 1601.81617 NaN NaN NaN 0.063154 5.0644E-05 NaN NaN NaN NaN 87.287 0.93286 87.287 86.955 87.888 -7.6294E-06 0 0 0 0.00015593 1 47950 87.001 61.615 1 NaN NaN 0 7819500 0 7819500 34528 2008;393 13086 13445 53906 53906 TIQTPIGSTWNTQR 14 0 1 Unmodified _TIQTPIGSTWNTQR_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 801.9153 2 801.915361 1601.81617 67920.41 0.52013 0.0004171 0.057091 4.5782E-05 0.57723 0.00046289 801.915189840966 806.919710086709 87.407 1.001 87.407 87.069 88.071 0 338 58 9 0 0 0 0.00011216 2 47221 83.182 83.182 1 1.4051 1.1385 0 11852000 4576400 7275600 34529 2008;393 13086 13445 53907;53908 53908 TIQVDNTDAEGR 12 0 1 Unmodified _TIQVDNTDAEGR_ 0 0 0 B4DQG5;V9HW38;P28838 B4DQG5 B4DQG5 HEL-S-106;LAP3 Cytosol aminopeptidase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.8202 2 659.815313 1317.61607 NaN NaN NaN 0.44466 0.00029339 NaN NaN NaN NaN 28.214 0.27189 28.214 28.119 28.39 0 0 0 0 0.00082253 2 13297 84.817 48.26 1 NaN NaN 0 4232500 0 4232500 34530 1023 13087 13446 53909;53910 53910 TIQVDNTDAEGR 12 0 1 Unmodified _TIQVDNTDAEGR_ 0 0 0 B4DQG5;V9HW38;P28838 B4DQG5 B4DQG5 HEL-S-106;LAP3 Cytosol aminopeptidase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8191 2 659.815313 1317.61607 NaN NaN NaN 0.72622 0.00047917 NaN NaN NaN NaN 27.647 0.33012 27.647 27.524 27.854 -1.9073E-06 0 0 0 5.1E-05 1 12923 94.309 61.047 1 NaN NaN 0 7827800 0 7827800 34531 1023 13087 13446 53911 53911 TIRYPDPLIK 10 1 1 Unmodified _TIRYPDPLIK_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47 B2R491 B2R491 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 411.7517 3 405.908046 1214.70231 98895.58 0.1418 5.7558E-05 -0.021082 -8.5575E-06 0.12072 4.9E-05 405.908013917369 411.915480630524 70.344 0.72279 70.344 69.967 70.689 -7.6294E-06 168 63 5 0 0 0 0.045682 1 40787 33.039 23.035 1 1.1707 1.3016 0 7664900 4028200 3636800 34532 824 13088 13447 53912 53912 TIRYPDPLIK 10 1 1 Unmodified _TIRYPDPLIK_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47 B2R491 B2R491 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.9156 3 405.908046 1214.70231 95714.49 0.08593 3.488E-05 -0.2446 -9.9284E-05 -0.15867 -6.4404E-05 405.907937504211 411.915424977506 68.051 0.68249 68.051 67.749 68.432 0 172 55 5 0 0 0 0.033833 1 40300 26.786 16.782 1 1.1094 1.2356 0 10932000 5888000 5043800 34533 824 13088 13447 53913 53913 TISHVIIGLK 10 1 0 Unmodified _TISHVIIGLK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 363.5687 3 360.89737 1079.67028 NaN NaN NaN -0.065626 -2.3684E-05 NaN NaN NaN NaN 65.966 1.3944 65.966 65.477 66.871 0 0 0 0 0.017879 2 38377 44.318 31.362 1 NaN NaN 0 7070700 0 7070700 34534 1076 13089 13448 53914;53915 53915 TISHVIIGLK 10 1 0 Unmodified _TISHVIIGLK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.8498 2 540.842416 1079.67028 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.268 1 66.268 65.768 66.768 0 0 0 0 0.000773 1 38215 69.716 46.287 1 34535 1076 13089 13448 53916 53916 TISHVIIGLK 10 1 0 Unmodified _TISHVIIGLK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 363.5686 3 360.89737 1079.67028 NaN NaN NaN 0.040427 1.459E-05 NaN NaN NaN NaN 62.854 0.70564 62.854 62.622 63.328 0 0 0 0 0.029337 1 36876 39.001 28.643 1 NaN NaN 0 10495000 0 10495000 34536 1076 13089 13448 53917 53917 TISSYTAFSR 10 0 1 Unmodified _TISSYTAFSR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.7902 2 566.785296 1131.55604 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.088 1 56.088 55.588 56.588 0 0 0 0 0.016989 1 31573 54.982 23.908 1 34537 1854 13090 13449 53918 53918 TITGNSAAVITPFK 14 1 0 Unmodified _TITGNSAAVITPFK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.3968 2 710.395741 1418.77693 72977.6 0.73343 0.00052102 0.20501 0.00014564 0.93844 0.00066666 710.395883890668 714.403063616711 99.44 0.58245 99.44 99.082 99.664 -7.6294E-06 140 32 7 0 0 0 0.00015145 1 56096 76.522 76.522 1 0.5446 0.42397 0 3721800 2277300 1444500 34538 2014 13091 13450 53919 53919 TITLEVEPSDTIENVK 16 1 0 Unmodified _TITLEVEPSDTIENVK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q9UFQ0;Q96H31;Q66K58;Q59EM9;J3QSA3;F5GZ39 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.9703 2 894.467289 1786.92002 65013.27 0.61478 0.0005499 -0.13968 -0.00012494 0.4751 0.00042496 894.467599178645 898.474090533043 97.362 0.54543 97.362 96.857 97.402 0 315 49 7 0 0 0 6.8075E-81 2 59139 202.44 202.44 1 0.92607 1.127 0 2605000000 1331400000 1273600000 34539 891 13092 13451 53920;53921 53920 TITLEVEPSDTIENVK 16 1 0 Unmodified _TITLEVEPSDTIENVK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q9UFQ0;Q96H31;Q66K58;Q59EM9;J3QSA3;F5GZ39 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 898.4747 2 894.467289 1786.92002 64739.69 0.71143 0.00063635 -0.14022 -0.00012542 0.57122 0.00051094 894.46759450703 898.474145697284 97.466 2.3799 97.466 97.082 99.462 0 1162 198 10 0 0 0 1.2271E-109 4 59845 228.83 228.83 1 0.85712 1.0687 0 12456000000 6556200000 5900200000 34540 891 13092 13451 53922;53923;53924;53925 53923 TITLEVEPSDTIENVK 16 1 0 Unmodified _TITLEVEPSDTIENVK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q9UFQ0;Q96H31;Q66K58;Q59EM9;J3QSA3;F5GZ39 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 898.9772 2 894.467289 1786.92002 64377.79 0.49088 0.00043908 0.014127 1.2636E-05 0.50501 0.00045171 894.969091315303 898.975906950524 99.565 0.60786 99.565 99.16 99.767 -7.6294E-06 124 49 5 0 0 0 5.8355E-12 2 60940 113.63 113.63 1 0.71523 0.70195 0 20454000 9029200 11425000 34541 891 13092 13451 53926;53927 53927 TITLEVEPSDTIENVK 16 1 0 Unmodified _TITLEVEPSDTIENVK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q9UFQ0;Q96H31;Q66K58;Q59EM9;J3QSA3;F5GZ39 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.9701 2 894.467289 1786.92002 64789.65 0.76655 0.00068566 -0.27833 -0.00024896 0.48822 0.0004367 894.467581113575 898.474028286951 96.613 1.9245 96.613 96.223 98.147 0 1175 159 13 0 0 0 3.455E-110 4 60079 236.11 236.11 1 0.92031 1.0924 0 5114600000 2681900000 2432700000 34542 891 13092 13451 53928;53929;53930;53931 53929 TITLEVEPSDTIENVK 16 1 0 Unmodified _TITLEVEPSDTIENVK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q9UFQ0;Q96H31;Q66K58;Q59EM9;J3QSA3;F5GZ39 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.4683 2 894.467289 1786.92002 64323.27 0.5704 0.0005102 0.2505 0.00022406 0.82089 0.00073426 894.467524430689 898.474510445129 97.473 1.514 97.473 97.41 98.924 0 540 125 6 0 0 0 5.5292E-68 4 61180 191.23 191.23 1 0.8848 1.0324 0 266530000 147470000 119050000 34543 891 13092 13451 53932;53933;53934;53935 53933 TITLEVEPSDTIENVK 16 1 0 Unmodified _TITLEVEPSDTIENVK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q9UFQ0;Q96H31;Q66K58;Q59EM9;J3QSA3;F5GZ39 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.4701 2 894.467289 1786.92002 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.931 1 99.931 99.431 100.43 0 0 0 0 0.00089727 1 62714 72.2 47.346 1 34544 891 13092 13451 53936 53936 TITLEVEPSDTIENVK 16 1 0 Unmodified _TITLEVEPSDTIENVK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q9UFQ0;Q96H31;Q66K58;Q59EM9;J3QSA3;F5GZ39 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 898.4752 2 894.467289 1786.92002 64411 0.62728 0.00056108 -0.065751 -5.8812E-05 0.56153 0.00050227 894.467726685253 898.474306365408 110.45 2.5067 110.45 110.14 112.64 -7.6294E-06 856 131 13 0 0 0 1.9772E-68 6 63685 197.56 197.56 1 1.1002 0.9888 0 605130000 284980000 320150000 34545 891 13092 13451 53937;53938;53939;53940;53941;53942 53937 TITLEVEPSDTIENVK 16 1 0 Unmodified _TITLEVEPSDTIENVK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q9UFQ0;Q96H31;Q66K58;Q59EM9;J3QSA3;F5GZ39 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 898.4755 2 894.467289 1786.92002 64261.29 0.37886 0.00033888 0.0038623 3.4547E-06 0.38273 0.00034234 894.467942414188 898.474422861737 110.33 2.6975 110.33 109.96 112.66 7.6294E-06 855 145 12 0 0 0 5.2478E-110 6 62691 234.63 234.63 1 1.1213 0.98809 0 766230000 360960000 405270000 34546 891 13092 13451 53943;53944;53945;53946;53947;53948 53943 TITQIEEFSDVNEGEK 16 1 0 Unmodified _TITQIEEFSDVNEGEK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 923.9439 2 919.936353 1837.85815 62457.54 0.45613 0.00041961 0.42862 0.0003943 0.88475 0.00081391 919.937799893663 923.943267379129 83.425 0.94855 83.425 83.079 84.028 0 314 81 6 0 0 0 4.2576E-18 2 49943 135.94 135.94 1 1.084 1.1731 0 36031000 18791000 17240000 34547 1336 13093 13452 53949;53950 53950 TITQIEEFSDVNEGEK 16 1 0 Unmodified _TITQIEEFSDVNEGEK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 919.939 2 919.936353 1837.85815 62244.63 0.54457 0.00050097 -0.5533 -0.000509 -0.0087259 -8.0273E-06 920.435787058667 923.94305411655 82.534 0.93111 82.534 82.214 83.145 0 334 78 6 0 0 0 1.4509E-33 3 50719 151.78 151.78 1 0.98284 1.012 0 32476000 16018000 16458000 34548 1336 13093 13452 53951;53952;53953 53952 TITQIEEFSDVNEGEK 16 1 0 Unmodified _TITQIEEFSDVNEGEK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 923.9453 2 919.936353 1837.85815 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.405 1 83.405 82.905 83.905 0 0 0 0 0.00050988 1 51114 77.593 64.613 1 34549 1336 13093 13452 53954 53954 TITQIEEFSDVNEGEK 16 1 0 Unmodified _TITQIEEFSDVNEGEK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 923.9453 2 919.936353 1837.85815 63572.3 0.75497 0.00069453 0.014677 1.3502E-05 0.76965 0.00070803 919.93645311419 923.943522255909 95.862 1.7032 95.862 95.456 97.159 0 447 105 9 0 0 0 0.0001545 3 54095 70.438 70.438 1 1.9845 1.5425 0 12581000 4442800 8138100 34550 1336 13093 13452 53955;53956;53957 53956 TITQIEEFSDVNEGEK 16 1 0 Unmodified _TITQIEEFSDVNEGEK_ 0 0 0 J3QQW9;Q15022;A8K1U9 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 923.9436 2 919.936353 1837.85815 63573.05 0.28209 0.0002595 0.0036471 3.3551E-06 0.28574 0.00026286 919.936791461814 923.943833773022 95.832 1.4584 95.832 95.47 96.929 0 514 87 11 0 0 0 0.00038789 4 53218 51.135 51.135 1 1.9114 1.5786 0 11483000 4165000 7318000 34551 1336 13093 13452 53958;53959;53960;53961 53961 TITYQAVPSEVPNEEPK 17 1 0 Unmodified _TITYQAVPSEVPNEEPK_ 0 0 0 Q9BY44;F8WAE5;H7C5R5 Q9BY44 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.4877 2 951.478188 1900.94182 NaN NaN NaN -0.047562 -4.5255E-05 NaN NaN NaN NaN 75.616 0.42668 75.616 75.391 75.818 0 0 0 0 0.020255 1 44424 39.878 32.616 1 NaN NaN 0 5578000 0 5578000 34552 2017 13094 13453 53962 53962 TIVEELLADSEFR 13 0 1 Unmodified _TIVEELLADSEFR_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.9003 2 761.393396 1520.77224 69683.23 0.91839 0.00069925 0.3069 0.00023367 1.2253 0.00093292 761.39374325802 766.397644176453 123.11 1.0522 123.11 122.65 123.7 0 430 78 9 0 0 0 1.1414E-13 1 79721 133.07 108.28 1 0.85874 0.8957 0 38528000 21154000 17374000 34553 1813 13095 13454 53963 53963 TIVEELLADSEFR 13 0 1 Unmodified _TIVEELLADSEFR_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.3934 2 761.393396 1520.77224 69876.97 0.94415 0.00071887 0.037708 2.8711E-05 0.98185 0.00074758 761.393465553203 766.397549762712 122.66 0.73881 122.66 122.42 123.16 0 357 57 7 0 0 0 2.1727E-23 2 81312 151.15 134.52 1 0.85742 0.98237 0 51182000 27416000 23767000 34554 1813 13095 13454 53964;53965 53965 TIVEELLADSEFRR 14 0 2 Unmodified _TIVEELLADSEFRR_ 0 0 1 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.2999 3 559.96506 1676.87335 NaN NaN NaN -0.39695 -0.00022228 NaN NaN NaN NaN 111.27 0.22194 111.27 111.11 111.34 0 0 0 0 0.024216 1 69967 32.734 20.588 1 NaN NaN 0 6085100 6085100 0 34555 1813 13096 13455 53966 53966 TIVEELLADSEFRR 14 0 2 Unmodified _TIVEELLADSEFRR_ 0 0 1 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 559.9651 3 559.96506 1676.87335 83084.95 0.75719 0.000424 -0.026114 -1.4623E-05 0.73107 0.00040938 559.96479649843 566.637249252865 110.56 0.59232 110.56 110.32 110.91 0 158 44 6 0 0 0 0.0017315 1 71127 32.275 32.275 1 1.1603 1.2529 0 16701000 6877000 9823800 34556 1813 13096 13455 53967 53967 TIVFVETK 8 1 0 Unmodified _TIVFVETK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QSF1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.7803 2 468.773668 935.532783 88420.59 0.054405 2.5503E-05 -0.0057928 -2.7155E-06 0.048612 2.2788E-05 468.773446580351 472.780713943386 64.706 1.1776 64.706 64.173 65.351 0 448 104 7 0 0 0 0.015065 1 37067 61.999 30.044 1 1.2316 1.323 0 39625000 19255000 20370000 34557 1009 13097 13456 53968 53968 TIVFVETK 8 1 0 Unmodified _TIVFVETK_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3QSF1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7803 2 468.773668 935.532783 89214.2 0.24636 0.00011549 -0.12343 -5.7862E-05 0.12293 5.7625E-05 468.773396690124 472.780629829262 63.383 1.2181 63.383 62.858 64.076 0 493 105 6 0 0 0 0.014196 2 37078 63.565 41.818 1 1.1633 1.2741 0 40813000 17358000 23455000 34558 1009 13097 13456 53969;53970 53969 TIVITSHPGQIVK 13 1 0 Unmodified _TIVITSHPGQIVK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.6156 3 464.94516 1391.81365 91032.99 0.39271 0.00018259 -0.61764 -0.00028717 -0.22493 -0.00010458 464.944947945651 467.616178471649 56.365 1.0118 56.365 55.865 56.877 -3.8147E-06 385 86 7 0 0 0 0.0033728 1 31541 41.092 41.092 1 1.1427 1.2362 0 43088000 21135000 21953000 34559 1535 13098 13457 53971 53971 TIVITSHPGQIVK 13 1 0 Unmodified _TIVITSHPGQIVK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.9214 2 696.914101 1391.81365 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.995 1 55.995 55.495 56.495 0 0 0 0 0.050423 1 31517 41.399 6.7071 1 34560 1535 13098 13457 53972 53972 TIVITSHPGQIVK 13 1 0 Unmodified _TIVITSHPGQIVK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.9163 2 696.914101 1391.81365 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.131 1 56.131 55.631 56.631 -3.8147E-06 0 0 0 0.0016026 1 31606 87.298 51.354 1 34561 1535 13098 13457 53973 53973 TIVITSHPGQIVK 13 1 0 Unmodified _TIVITSHPGQIVK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.4247 2 696.914101 1391.81365 73041.7 1.0196 0.0007106 0.02441 1.7011E-05 1.044 0.00072761 696.914395751151 700.921120147999 54.494 0.27639 54.494 54.36 54.636 0 70 21 4 0 0 0 0.00013549 3 31112 96.015 88.887 1 1.2356 1.2936 0 19406000 7242500 12163000 34562 1535 13098 13457 53974;53975;53976 53974 TIVITSHPGQIVK 13 1 0 Unmodified _TIVITSHPGQIVK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.6162 3 464.94516 1391.81365 90048.83 0.46709 0.00021717 -0.57137 -0.00026565 -0.10428 -4.8483E-05 464.94476416653 467.616280223199 54.561 1.0995 54.561 54.33 55.429 0 261 86 6 0 0 0 0.0035199 2 31229 40.552 40.552 1 1.2767 1.3842 0 39005000 18215000 20790000 34563 1535 13098 13457 53977;53978 53977 TIVITSHPGQIVK 13 1 0 Unmodified _TIVITSHPGQIVK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.9141 2 696.914101 1391.81365 73090.5 0.67886 0.00047311 -0.20433 -0.0001424 0.47453 0.00033071 696.913942078959 700.921017239572 65.517 0.82718 65.517 65.23 66.057 0 289 62 6 0 0 0 0.0047412 2 33820 57.836 54.191 1 0.78731 0.62348 0 4937300 2863800 2073400 34564 1535 13098 13457 53979;53980 53980 TIVITSHPGQIVK 13 1 0 Unmodified _TIVITSHPGQIVK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 467.6159 3 464.94516 1391.81365 89072.99 0.46618 0.00021675 -0.67646 -0.00031452 -0.21028 -9.777E-05 464.944815390125 467.616210124051 65.522 0.89392 65.522 65.23 66.124 0 317 66 7 0 0 0 0.0027484 2 33795 43.382 36.802 1 0.82806 0.65201 0 5741900 3035000 2706900 34565 1535 13098 13457 53981;53982 53981 TIVITSHPGQIVK 13 1 0 Unmodified _TIVITSHPGQIVK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 464.945 3 464.94516 1391.81365 89704.14 0.059456 2.7644E-05 -0.40497 -0.00018829 -0.34552 -0.00016065 464.944933500418 467.616278673379 65.779 0.98022 65.779 65.394 66.374 0 328 74 6 0 0 0 0.019827 2 33142 26.124 23.824 1 0.76596 0.61519 0 4222500 2168200 2054300 34566 1535 13098 13457 53983;53984 53983 TIVLQEGNSQK 11 1 0 Unmodified _TIVLQEGNSQK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8376 2 608.830234 1215.64592 80740.88 0.98961 0.00060251 0.49215 0.00029963 1.4818 0.00090214 608.830262077306 612.837376013062 33.453 0.19824 33.453 33.296 33.494 0 50 18 4 0 0 0 0.00036511 1 16670 84.213 72.619 1 0.9023 0.9098 0 5437800 2756700 2681100 34567 264 13099 13458 53985 53985 TIVLQEGNSQK 11 1 0 Unmodified _TIVLQEGNSQK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.8324 2 608.830234 1215.64592 NaN NaN NaN 0.18556 0.00011297 NaN NaN NaN NaN 33.177 0.61153 33.177 32.872 33.484 0 0 0 0 0.0036533 2 16565 77.677 39.866 1 NaN NaN 0 9072300 9072300 0 34568 264 13099 13458 53986;53987 53987 TIVLQEGNSQK 11 1 0 Unmodified _TIVLQEGNSQK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.8315 2 608.830234 1215.64592 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.956 1 32.956 32.456 33.456 0 0 0 0 0.049948 1 16441 56.013 24.94 1 34569 264 13099 13458 53988 53988 TIVLQEGNSQK 11 1 0 Unmodified _TIVLQEGNSQK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.8381 2 608.830234 1215.64592 78047.94 0.40406 0.00024601 0.67635 0.00041178 1.0804 0.00065779 608.830203350234 612.837668137331 38.342 0.67445 38.342 37.979 38.653 0 169 50 4 0 0 0 0.00048356 2 17310 74.92 63.326 1 1.0368 0.86787 0 1844300 913030 931230 34570 264 13099 13458 53989;53990 53989 TIVLQEGNSQK 11 1 0 Unmodified _TIVLQEGNSQK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.8398 2 608.830234 1215.64592 78740.16 0.24565 0.00014956 0.42228 0.0002571 0.66793 0.00040665 608.830134698819 612.837707336892 38.354 0.76093 38.354 37.917 38.678 0 179 59 4 0 0 0 0.011983 1 16755 48.091 40.442 1 1.0476 0.82145 0 2065700 1103600 962080 34571 264 13099 13458 53991 53991 TIYPLADLLAR 11 0 1 Unmodified _TIYPLADLLAR_ 0 0 0 O95425;B4E3H1;Q569J5;B4E3N7 O95425 O95425 SVIL Supervillin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.3682 2 623.363713 1244.71287 78440.86 0.69023 0.00043026 0.13788 8.5949E-05 0.82811 0.00051621 623.865273070916 628.367966889576 120.4 0.48336 120.4 120.14 120.62 -7.6294E-06 74 33 4 0 0 0 0.0063276 1 77528 54.608 46.565 1 3.6962 3.961 0 3404900 1089500 2315400 34572 1425 13100 13459 53992 53992 TIYPLADLLAR 11 0 1 Unmodified _TIYPLADLLAR_ 0 0 0 O95425;B4E3H1;Q569J5;B4E3N7 O95425 O95425 SVIL Supervillin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3677 2 623.363713 1244.71287 NaN NaN NaN -0.027312 -1.7026E-05 NaN NaN NaN NaN 119.79 0.48009 119.79 119.63 120.11 -7.6294E-06 0 0 0 0.017926 3 78978 53.751 33.422 1 NaN NaN 0 3524500 0 3524500 34573 1425 13100 13459 53993;53994;53995 53993 TIYSGEENMDITK 13 1 0 Oxidation (M) _TIYSGEENM(ox)DITK_ TIYSGEENM(1)DITK TIYSGEENM(51.25)DITK 0 1 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.8529 2 758.845421 1515.67629 NaN NaN NaN 0.06807 5.1655E-05 NaN NaN NaN NaN 40.335 0.32343 40.335 40.137 40.46 0 0 0 0 0.0042478 1 21020 51.252 43.365 1 NaN NaN 0 5016800 0 5016800 34574 1928 13101 13460 53996 53996 1766 TIYSGEENMDITK 13 1 0 Oxidation (M) _TIYSGEENM(ox)DITK_ TIYSGEENM(1)DITK TIYSGEENM(40.71)DITK 0 1 0 Q8NG31;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.8539 2 758.845421 1515.67629 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.477 1 40.477 39.977 40.977 0 0 0 0 0.025585 1 21181 40.715 11.988 1 34575 1928 13101 13460 53997 53997 1766 TKDDIIICEIGDVFK 15 2 0 Unmodified _TKDDIIICEIGDVFK_ 0 0 1 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.6498 3 589.306205 1764.89679 78301.79 1.0875 0.00064087 -0.27941 -0.00016466 0.80809 0.00047621 589.305693243798 594.648925985842 128.45 0.39105 128.45 128.26 128.65 0 69 16 7 0 0 0 0.05949 1 77650 11.606 5.7834 1 2.9024 2.5484 0 2766300 852950 1913400 34576 2147 13102 13461 53998 53998 TKEDILESK 9 2 0 Unmodified _TKEDILESK_ 0 0 1 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.8015 2 531.787504 1061.56045 88530.63 0.25521 0.00013572 -0.20026 -0.0001065 0.054944 2.9219E-05 531.787354100749 539.801717027484 23.197 0.34098 23.197 23.061 23.402 0 37 14 4 0 0 0 0.0015688 1 9116 103.26 74.094 1 0.8197 0.93463 0 7391600 4766200 2625400 34577 1075 13103 13462 53999 53999 TKPYIQVDIGGGQTK 15 2 0 Unmodified _TKPYIQVDIGGGQTK_ 0 0 1 V9HWB4;P11021;B4DEF7 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.961 3 535.626267 1603.85697 85907.91 0.43875 0.000235 -0.32025 -0.00017153 0.1185 6.347E-05 535.62596562785 541.303485687938 68.641 0.31168 68.641 68.464 68.776 0 81 20 7 0 0 0 0.019365 1 35080 24.043 24.043 1 0.63709 0.55847 0 1694100 871200 822920 34578 1466 13104 13463 54000 54000 TLAEHQQLIPLVEK 14 1 0 Unmodified _TLAEHQQLIPLVEK_ 0 0 0 Q5LJA5;Q5LJA9;Q9Y5K5;B2RB07;H0Y4E0;B4DW59;B7Z9U9;H0Y6Y4;H0Y4K0;B4DKB3;H0Y636 Q5LJA5 Q5LJA5 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.3129 3 540.310279 1617.90901 84824.95 0.92788 0.00050134 1.4736 0.00079621 2.4015 0.0012976 540.312298695119 543.315580579395 80.154 0.64921 80.154 79.964 80.613 -7.6294E-06 146 55 4 0 0 0 0.024987 1 47775 22.606 10.992 1 0.48083 0.50387 0 16610000 9455400 7154700 34579 1811 13105 13464 54001 54001 TLAEHQQLIPLVEK 14 1 0 Unmodified _TLAEHQQLIPLVEK_ 0 0 0 Q5LJA5;Q5LJA9;Q9Y5K5;B2RB07;H0Y4E0;B4DW59;B7Z9U9;H0Y6Y4;H0Y4K0;B4DKB3;H0Y636 Q5LJA5 Q5LJA5 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.9813 3 540.310279 1617.90901 84042.29 0.7555 0.0004082 -0.33157 -0.00017915 0.42393 0.00022905 540.310599025057 543.316089862117 78.71 0.56935 78.71 78.481 79.05 0 119 50 5 0 0 0 0.0035446 2 47724 36.345 36.345 1 1.3745 1.3822 0 13580000 4619800 8960100 34580 1811 13105 13464 54002;54003 54002 TLAFSIPILMQLK 13 1 0 Oxidation (M) _TLAFSIPILM(ox)QLK_ TLAFSIPILM(1)QLK TLAFSIPILM(42.34)QLK 0 1 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.9455 2 745.936188 1489.85782 NaN NaN NaN -1.4966 -0.0011163 NaN NaN NaN NaN 131.44 0.3705 131.44 131.29 131.66 0 0 0 0 0.0099734 1 87924 42.336 21.558 1 NaN NaN 0 4541700 0 4541700 34581 2126 13106 13465 54004 54004 1954 TLAFSIPILMQLK 13 1 0 Oxidation (M) _TLAFSIPILM(ox)QLK_ TLAFSIPILM(1)QLK TLAFSIPILM(43.28)QLK 0 1 0 Q9Y2R4;Q59H21;B3KM65 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.9365 2 745.936188 1489.85782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.53 1 131.53 131.03 132.03 0 0 0 0 0.016353 1 88008 43.282 28.863 1 34582 2126 13106 13465 54005 54005 1954 TLAGLPLLVAYK 12 1 0 Unmodified _TLAGLPLLVAYK_ 0 0 0 Q8N5A0;A0A087WUT6;O60841;B3KM86;D3DVI5 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.9002 2 629.892106 1257.76966 78403.68 0.75244 0.00047396 0.044987 2.8337E-05 0.79743 0.0005023 629.892028504211 633.899203830427 120.03 0.73601 120.03 119.76 120.5 7.6294E-06 172 50 6 0 0 0 0.00086156 2 77177 64.711 64.711 1 2.055 2.1349 0 14854000 4221800 10632000 34583 414 13107 13466 54006;54007 54006 TLAGLPLLVAYK 12 1 0 Unmodified _TLAGLPLLVAYK_ 0 0 0 Q8N5A0;A0A087WUT6;O60841;B3KM86;D3DVI5 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.892 2 629.892106 1257.76966 78169.13 0.8293 0.00052237 -0.13111 -8.2586E-05 0.69819 0.00043978 629.892001032785 633.899100407189 119.47 0.71082 119.47 119.19 119.9 -7.6294E-06 222 51 6 0 0 0 1.8274E-05 2 78665 104.2 95.98 1 2.1619 2.2027 0 12263000 4267400 7995400 34584 414 13107 13466 54008;54009 54009 TLAQAMLNNAQPDQYEAPDK 20 1 0 Oxidation (M) _TLAQAM(ox)LNNAQPDQYEAPDK_ TLAQAM(1)LNNAQPDQYEAPDK TLAQAM(44.46)LNNAQPDQYEAPDK 0 1 0 A0A024RAM0;Q92973 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1121.5302 2 1117.52333 2233.03211 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.427 1 62.427 61.927 62.927 0 0 0 0 0.0032911 1 36610 44.457 33.017 1 34585 309 13108 13467 54010 54010 226 TLATDILMGVLK 12 1 0 Oxidation (M) _TLATDILM(ox)GVLK_ TLATDILM(1)GVLK TLATDILM(131.44)GVLK 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.8705 2 645.870514 1289.72647 75003.66 0.89914 0.00058073 -0.198 -0.00012788 0.70114 0.00045284 645.87038283941 649.877497512883 124.08 0.71706 124.08 123.76 124.48 0 265 49 8 0 0 0 4.7687E-13 2 80447 131.44 131.44 1 2.0773 2.0801 0 26701000 9166400 17535000 34586 1379 13109 13468 54011;54012 54012 1048 TLATDILMGVLK 12 1 0 Oxidation (M) _TLATDILM(ox)GVLK_ TLATDILM(1)GVLK TLATDILM(107.15)GVLK 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.8708 2 645.870514 1289.72647 74962.73 0.89982 0.00058117 -0.033551 -2.167E-05 0.86627 0.0005595 645.870468962536 649.8775545486 123.58 0.7933 123.58 123.25 124.04 7.6294E-06 278 57 8 0 0 0 5.7813E-06 2 81990 107.15 107.15 1 2.1068 2.2827 0 38887000 11999000 26888000 34587 1379 13109 13468 54013;54014 54014 1048 TLATDILMGVLK 12 1 0 Unmodified _TLATDILMGVLK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.8802 2 637.873056 1273.73156 NaN NaN NaN -0.75948 -0.00048445 NaN NaN NaN NaN 130.26 0.33064 130.26 130.07 130.4 0 0 0 0 0.00087876 1 84922 84.213 74.999 1 NaN NaN 0 2052600 0 2052600 34588 1379 13109 13469 54015 54015 TLATDILMGVLK 12 1 0 Unmodified _TLATDILMGVLK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.8744 2 637.873056 1273.73156 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.19 1 130.19 129.69 130.69 0 0 0 0 0.031117 1 84885 45.161 18.046 1 34589 1379 13109 13469 54016 54016 TLATDILMGVLK 12 1 0 Unmodified _TLATDILMGVLK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.873 2 637.873056 1273.73156 77637.34 0.64721 0.00041284 -0.1893 -0.00012075 0.45791 0.00029209 637.87287573437 641.879844809581 129.77 0.511 129.77 129.58 130.09 0 125 35 6 0 0 0 3.9336E-08 2 86670 116.52 111.56 1 0.8977 0.90535 0 7755800 4034100 3721700 34590 1379 13109 13469 54017;54018 54017 TLATLSENNMEAK 13 1 0 Oxidation (M) _TLATLSENNM(ox)EAK_ TLATLSENNM(1)EAK TLATLSENNM(41.4)EAK 0 1 0 Q9H2W6 Q9H2W6 Q9H2W6 MRPL46 39S ribosomal protein L46, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.3232 2 719.348131 1436.68171 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.335 1 36.335 35.835 36.835 0 0 0 0 0.023123 1 18360 41.399 24.179 1 34591 2027 13110 13470 54019 54019 1865 TLATTLAPR 9 0 1 Unmodified _TLATTLAPR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.2861 2 472.282192 942.549831 86890.99 -0.019603 -9.2583E-06 0.12655 5.9769E-05 0.10695 5.0511E-05 472.282093547559 477.286293762112 49.304 0.58224 49.304 48.99 49.572 0 284 49 8 0 0 0 0.0015025 1 27735 84.568 34.441 1 0.9083 1.0387 0 88097000 47501000 40596000 34592 897 13111 13471 54020 54020 TLAVSGLGVVGR 12 0 1 Unmodified _TLAVSGLGVVGR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8406 2 564.840405 1127.66626 79747.84 0.72173 0.00040766 -0.16682 -9.4227E-05 0.5549 0.00031343 564.840676457569 569.844350772631 85.303 2.062 85.303 85.007 87.069 -7.6294E-06 937 162 10 0 0 0 1.6095E-37 5 51639 175.88 151.36 1 0.75473 0.90004 0 2811400000 1621600000 1189800000 34593 1471 13112 13472 54021;54022;54023;54024;54025 54024 TLAVSGLGVVGR 12 0 1 Unmodified _TLAVSGLGVVGR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8387 2 564.840405 1127.66626 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.391 1 87.391 86.891 87.891 0 0 0 0 0.035296 1 52744 44.318 26.932 1 34594 1471 13112 13472 54026 54026 TLAVSGLGVVGR 12 0 1 Unmodified _TLAVSGLGVVGR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.8457 2 564.840405 1127.66626 79468.46 0.65742 0.00037134 -0.26895 -0.00015192 0.38847 0.00021942 564.840491134715 569.844303415492 84.244 1.7477 84.244 84.038 85.786 0 905 141 10 0 0 0 2.9425E-29 4 52143 167.12 148.98 1 0.73294 0.86792 0 1690400000 934570000 755780000 34595 1471 13112 13472 54027;54028;54029;54030 54030 TLAVSGLGVVGR 12 0 1 Unmodified _TLAVSGLGVVGR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8403 2 564.840405 1127.66626 NaN NaN NaN -0.085372 -4.8221E-05 NaN NaN NaN NaN 85.669 0.47748 85.669 85.496 85.973 0 0 0 0 0.019898 1 52874 51.268 29.804 1 NaN NaN 0 12873000 12873000 0 34596 1471 13112 13472 54031 54031 TLAVSGLGVVGR 12 0 1 Unmodified _TLAVSGLGVVGR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.8407 2 564.840405 1127.66626 79850.57 0.67048 0.00037872 -0.36375 -0.00020546 0.30673 0.00017325 564.840462376992 569.844313076019 97.647 2.573 97.647 97.203 99.775 0 966 155 11 0 0 0 8.9476E-07 6 54815 112.3 112.3 1 1.261 1.0976 0 332750000 146910000 185840000 34597 1471 13112 13472 54032;54033;54034;54035;54036;54037 54033 TLAVSGLGVVGR 12 0 1 Unmodified _TLAVSGLGVVGR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.845 2 564.840405 1127.66626 79858.12 0.41949 0.00023694 -0.10696 -6.0418E-05 0.31252 0.00017653 564.840607102058 569.844469631626 97.436 2.5085 97.436 97.02 99.528 0 955 147 13 0 0 0 1.8602E-05 7 53845 104.05 94.69 1 1.2307 1.0755 0 391840000 171890000 219950000 34598 1471 13112 13472 54038;54039;54040;54041;54042;54043;54044 54038 TLCGTPNYIAPEVLSK 16 1 0 Unmodified _TLCGTPNYIAPEVLSK_ 0 0 0 P53350;B2R841;B4E083;Q59GD0 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 881.9531 2 881.955837 1761.89712 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.058 1 96.058 95.558 96.558 -7.6294E-06 0 0 0 0.011538 1 58491 44.616 29.414 1 34599 1604 13113 13473 54045 54045 TLCLSTPSSSTVK 13 1 0 Unmodified _TLCLSTPSSSTVK_ 0 0 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.8538 2 690.855592 1379.69663 72603.86 0.5668 0.00039158 0.60743 0.00041965 1.1742 0.00081122 690.856075794736 694.863208938503 58.903 0.50448 58.903 58.605 59.109 0 111 40 4 0 0 0 0.0059861 1 33453 46.706 46.706 1 0.92329 0.96604 0 12066000 5039100 7027300 34600 1680 13114 13474 54046 54046 TLCPLCFSILK 11 1 0 Unmodified _TLCPLCFSILK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.3665 2 676.359259 1350.70396 72674.09 0.99482 0.00067286 -0.44133 -0.0002985 0.55349 0.00037436 676.359252237512 680.366289819369 129.54 0.75314 129.54 129.29 130.05 0 131 29 7 0 0 0 0.0083203 2 77439 60.518 38.432 1 1.6155 1.3251 0 5111000 1884000 3227000 34601 878 13115 13475 54047;54048 54048 TLDAQFENDER 11 0 1 Unmodified _TLDAQFENDER_ 0 0 0 A0A024R7X2;A0A024R7X1;P54274;E7EWM7;A8K914;Q5QGN5 A0A024R7X2 A0A024R7X2 TERF1 Telomeric repeat-binding factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.3049 2 669.302038 1336.58952 74867.48 0.31534 0.00021106 0.15063 0.00010082 0.46597 0.00031187 669.302668351993 674.305861721788 52.109 0.60976 52.109 51.853 52.463 0 131 51 4 0 0 0 0.0080859 1 25663 51.436 47.864 1 1.4957 1.299 0 2299400 1130400 1168900 34602 236 13116 13476 54049 54049 TLDAQFENDER 11 0 1 Unmodified _TLDAQFENDER_ 0 0 0 A0A024R7X2;A0A024R7X1;P54274;E7EWM7;A8K914;Q5QGN5 A0A024R7X2 A0A024R7X2 TERF1 Telomeric repeat-binding factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.3032 2 669.302038 1336.58952 75708.84 0.3821 0.00025574 -0.13263 -8.8767E-05 0.24947 0.00016697 669.302465007954 674.305762269042 52.582 0.662 52.582 52.326 52.988 0 166 53 4 0 0 0 0.0063655 1 25481 54.539 52.385 1 1.5352 1.3802 0 2010600 774710 1235900 34603 236 13116 13476 54050 54050 TLDELGIHLTK 11 1 0 Unmodified _TLDELGIHLTK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.5739 3 413.902961 1238.68705 94054.44 -0.035867 -1.4846E-05 -0.1286 -5.3229E-05 -0.16447 -6.8074E-05 414.237197724105 416.574272942808 78.226 0.87146 78.226 77.927 78.799 0 252 75 6 0 0 0 0.034755 1 47367 20.857 20.857 1 0.86943 0.92706 0 20875000 11664000 9210600 34604 794 13117 13477 54051 54051 TLDELGIHLTK 11 1 0 Unmodified _TLDELGIHLTK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.3508 2 620.350803 1238.68705 NaN NaN NaN 1.2047 0.00074733 NaN NaN NaN NaN 78.225 0.74982 78.225 77.938 78.688 0 0 0 0 0.012313 2 47333 56.202 35.873 1 NaN NaN 0 10009000 10009000 0 34605 794 13117 13477 54052;54053 54052 TLDELSQGTTTVK 13 1 0 Unmodified _TLDELSQGTTTVK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8718 2 696.864471 1391.71439 NaN NaN NaN 0.52411 0.00036523 NaN NaN NaN NaN 53.653 0.48754 53.653 53.332 53.82 0 0 0 0 4.326E-06 2 29981 102.52 85.293 1 NaN NaN 0 14199000 0 14199000 34606 397;1622 13118 13478 54054;54055 54054 TLDELSQGTTTVK 13 1 0 Unmodified _TLDELSQGTTTVK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8723 2 696.864471 1391.71439 NaN NaN NaN 0.21066 0.0001468 NaN NaN NaN NaN 52.563 0.6167 52.563 52.166 52.783 3.8147E-06 0 0 0 9.2796E-06 2 29942 98.898 98.898 1 NaN NaN 0 9799600 0 9799600 34607 397;1622 13118 13478 54056;54057 54056 TLDLPIYVTR 10 0 1 Unmodified _TLDLPIYVTR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.8431 2 595.842613 1189.67067 80212.04 0.79428 0.00047327 0.26048 0.0001552 1.0548 0.00062847 595.842725389514 600.846684522323 106.52 0.88995 106.52 106.01 106.9 0 284 64 6 0 0 0 0.010458 2 66051 53.327 22.253 1 1.1007 1.1411 0 22819000 11556000 11263000 34608 1607 13119 13479 54058;54059 54058 TLDLPIYVTR 10 0 1 Unmodified _TLDLPIYVTR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.8475 2 595.842613 1189.67067 79637.73 0.81642 0.00048646 0.18021 0.00010737 0.99663 0.00059383 595.84270342171 600.846921718504 105.86 0.78058 105.86 105.36 106.14 0 296 56 7 0 0 0 0.014443 2 67193 49.06 20.851 1 1.4476 1.5843 0 33230000 12972000 20258000 34609 1607 13119 13479 54060;54061 54061 TLDLPIYVTR 10 0 1 Unmodified _TLDLPIYVTR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.8433 2 595.842613 1189.67067 79471.5 0.81956 0.00048833 -0.26177 -0.00015597 0.55779 0.00033236 595.842857736229 600.846054609384 117.81 0.61385 117.81 117.51 118.13 0 106 26 6 0 0 0 0.037902 1 69512 39.622 23.96 1 0.78169 0.65291 0 3263600 1727400 1536300 34610 1607 13119 13479 54062 54062 TLDLPIYVTR 10 0 1 Unmodified _TLDLPIYVTR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.8431 2 595.842613 1189.67067 80509.78 0.54274 0.00032339 -0.13987 -8.3338E-05 0.40288 0.00024005 595.842651474579 600.845994374892 117.61 0.62686 117.61 117.37 118 0 113 29 6 0 0 0 0.043564 1 68435 37.344 21.682 1 0.84904 0.73611 0 2672800 1410500 1262300 34611 1607 13119 13479 54063 54063 TLDQISDADNIPGLLVLK 18 1 0 Unmodified _TLDQISDADNIPGLLVLK_ 0 0 0 Q6PGP7;D6RCE2 Q6PGP7 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 967.5428 2 963.03313 1924.05171 NaN NaN NaN 0.38934 0.00037494 NaN NaN NaN NaN 125.28 0.35217 125.28 125.07 125.42 0 0 0 0 0.013455 1 81374 40.377 34.191 1 NaN NaN 0 2665700 0 2665700 34612 1855 13120 13480 54064 54064 TLDSWRDEFLIQASPR 16 0 2 Unmodified _TLDSWRDEFLIQASPR_ 0 0 1 A0A158RFU6;P51149;C9J592;B4DPH9 A0A158RFU6 A0A158RFU6 RAB7A Ras-related protein Rab-7a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.3307 3 645.330402 1932.96938 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.97 1 101.97 101.47 102.47 0 0 0 0 0.0004198 1 64279 51.193 24.464 1 34613 628 13121 13481 54065 54065 TLDVVLEEHLK 11 1 0 Unmodified _TLDVVLEEHLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.3734 2 648.36391 1294.71327 77400.41 0.90994 0.00058997 0.39207 0.00025421 1.302 0.00084418 648.363832090747 652.371705176778 80.112 0.90429 80.112 79.563 80.467 0 275 77 5 0 0 0 0.00047367 2 47441 86.624 67.353 1 0.83621 0.90578 0 43768000 18938000 24830000 34614 897 13122 13482 54066;54067 54067 TLDVVLEEHLK 11 1 0 Unmodified _TLDVVLEEHLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3715 2 648.36391 1294.71327 75777.16 0.67992 0.00044084 0.15312 9.9274E-05 0.83304 0.00054011 648.363800085279 652.371450704151 78.628 0.92987 78.628 78.215 79.145 0 268 80 5 0 0 0 0.00030075 2 47702 87.913 68.127 1 0.84493 0.94911 0 74528000 36283000 38245000 34615 897 13122 13482 54068;54069 54069 TLDVVLEEHLK 11 1 0 Unmodified _TLDVVLEEHLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.258 3 432.578365 1294.71327 92571.88 -0.077933 -3.3712E-05 -0.027501 -1.1896E-05 -0.10543 -4.5609E-05 432.578433416604 435.249553783143 78.621 0.87625 78.621 78.195 79.072 0 245 77 4 0 0 0 0.039897 1 47578 41.598 32.853 1 0.95679 1.0723 0 54577000 28504000 26073000 34616 897 13122 13482 54070 54070 TLDVVLEEHLK 11 1 0 Unmodified _TLDVVLEEHLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.3657 2 648.36391 1294.71327 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.022 1 92.022 91.522 92.522 0 0 0 0 0.0065062 1 51194 63.283 36.168 1 34617 897 13122 13482 54071 54071 TLDVVLEEHLK 11 1 0 Unmodified _TLDVVLEEHLK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.3721 2 648.36391 1294.71327 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.867 1 91.867 91.367 92.367 0 0 0 0 0.051608 1 50262 43.308 28.641 1 34618 897 13122 13482 54072 54072 TLEEAVGNIVK 11 1 0 Unmodified _TLEEAVGNIVK_ 0 0 0 Q9Y678;B3KW21;Q8WUI6;H0Y8X7 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.8365 2 586.829703 1171.64485 NaN NaN NaN 0.0064222 3.7687E-06 NaN NaN NaN NaN 81.377 0.66212 81.377 80.991 81.654 0 0 0 0 0.013764 1 48498 54.982 28.598 1 NaN NaN 0 8704900 0 8704900 34619 2151 13123 13483 54073 54073 TLEEAVGNIVK 11 1 0 Unmodified _TLEEAVGNIVK_ 0 0 0 Q9Y678;B3KW21;Q8WUI6;H0Y8X7 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.8303 2 586.829703 1171.64485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.373 1 81.373 80.873 81.873 0 0 0 0 0.045859 1 48493 43.982 15.808 1 34620 2151 13123 13483 54074 54074 TLEEAVGNIVK 11 1 0 Unmodified _TLEEAVGNIVK_ 0 0 0 Q9Y678;B3KW21;Q8WUI6;H0Y8X7 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8362 2 586.829703 1171.64485 83186.97 0.68606 0.0004026 -0.25878 -0.00015186 0.42728 0.00025074 586.82939685036 590.836506452684 80.193 0.62741 80.193 79.928 80.555 0 145 49 4 0 0 0 0.00016522 3 48828 94.309 62.375 1 2.1442 2.178 0 12753000 3841900 8910900 34621 2151 13123 13483 54075;54076;54077 54075 TLEEDEEELFK 11 1 0 Unmodified _TLEEDEEELFK_ 0 0 0 A0A140VK94;F6WQW2;P43487;C9JJ34;C9JDM3;B7Z6U1;B4DE76 A0A140VK94 A0A140VK94 RANBP1 Ran-specific GTPase-activating protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.3292 2 691.322105 1380.62966 72847.38 0.79571 0.00055009 0.50813 0.00035128 1.3038 0.00090137 691.322629171073 695.329487605818 86.341 1.0907 86.341 85.884 86.975 0 361 84 7 0 0 0 6.8436E-08 2 51797 114.5 103.34 1 3.671 4.1132 0 64687000 13986000 50701000 34622 621 13124 13484 54078;54079 54078 TLEEDEEELFK 11 1 0 Unmodified _TLEEDEEELFK_ 0 0 0 A0A140VK94;F6WQW2;P43487;C9JJ34;C9JDM3;B7Z6U1;B4DE76 A0A140VK94 A0A140VK94 RANBP1 Ran-specific GTPase-activating protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.3298 2 691.322105 1380.62966 73092.8 0.63371 0.0004381 0.25561 0.00017671 0.88931 0.0006148 691.322268263318 695.329289341883 85.397 0.8786 85.397 85.027 85.906 0 292 69 7 0 0 0 1.8777E-05 2 52408 105.4 97.176 1 3.6392 4.1004 0 59618000 11420000 48197000 34623 621 13124 13484 54080;54081 54080 TLEEDEEELFK 11 1 0 Unmodified _TLEEDEEELFK_ 0 0 0 A0A140VK94;F6WQW2;P43487;C9JJ34;C9JDM3;B7Z6U1;B4DE76 A0A140VK94 A0A140VK94 RANBP1 Ran-specific GTPase-activating protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 695.3298 2 691.322105 1380.62966 NaN NaN NaN -0.052835 -3.6526E-05 NaN NaN NaN NaN 99.198 0.90734 99.198 98.757 99.664 -7.6294E-06 0 0 0 0.018157 1 55895 53.683 48.899 1 NaN NaN 0 3453600 0 3453600 34624 621 13124 13484 54082 54082 TLEEDVDDRAPSK 13 1 1 Unmodified _TLEEDVDDRAPSK_ 0 0 1 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.8665 2 737.854635 1473.69472 69908.77 0.85429 0.00063034 0.42425 0.00031304 1.2785 0.00094338 738.356008053185 746.865750208928 28.802 0.4456 28.802 28.558 29.003 0 80 23 5 0 0 0 0.00047978 2 13645 99.215 92.087 1 0.45759 0.52688 0 27557000 17929000 9628200 34625 1721 13125 13485 54083;54084 54084 TLEEDVDDRAPSK 13 1 1 Unmodified _TLEEDVDDRAPSK_ 0 0 1 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.8664 2 737.854635 1473.69472 69471.45 0.57789 0.0004264 0.61897 0.00045671 1.1969 0.00088311 738.357948158129 746.866004404171 28.019 0.33687 28.019 27.835 28.172 0 56 19 5 0 0 0 2.3733E-05 2 13197 98.353 98.353 1 0.82745 0.93453 0 15110000 7801700 7308100 34626 1721 13125 13485 54085;54086 54086 TLEEDVDDRAPSK 13 1 1 Unmodified _TLEEDVDDRAPSK_ 0 0 1 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.2459 3 492.238849 1473.69472 92504.32 0.37568 0.00018492 -0.16511 -8.1275E-05 0.21057 0.00010365 492.239244070654 498.245778992946 33.655 0.62957 33.655 33.382 34.011 0 122 53 4 0 0 0 0.0022697 1 14766 47.915 45.28 1 1.3527 1.1197 0 3932900 1701900 2231000 34627 1721 13125 13485 54087 54087 TLEEGHDFIQEFPGSPAFAALTSIAQK 27 1 0 Unmodified _TLEEGHDFIQEFPGSPAFAALTSIAQK_ 0 0 0 Q2YS46;B2RDN3;Q9Y5Y2;H3BQR2;B7Z6P0 Q2YS46 Q2YS46 NUBP1;NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 972.1584 3 968.818656 2903.43414 62390.58 0.37117 0.0003596 -0.16323 -0.00015814 0.20794 0.00020146 969.153427835181 971.823512962496 128.72 0.49455 128.72 128.34 128.84 0 173 31 9 0 0 0 0.040586 1 83967 12.021 12.021 1 1.2961 1.3379 0 12793000 4397500 8395200 34628 888 13126 13486 54088 54088 TLEEGHDFIQEFPGSPAFAALTSIAQK 27 1 0 Unmodified _TLEEGHDFIQEFPGSPAFAALTSIAQK_ 0 0 0 Q2YS46;B2RDN3;Q9Y5Y2;H3BQR2;B7Z6P0 Q2YS46 Q2YS46 NUBP1;NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 971.8254 3 968.818656 2903.43414 60728.34 0.57357 0.00055569 -0.22325 -0.00021629 0.35032 0.00033939 969.15296858722 971.488916907136 128.29 0.54539 128.29 127.85 128.4 -1.5259E-05 223 32 9 0 0 0 1.6289E-06 1 85578 38.006 38.006 1 1.3436 1.4584 0 22266000 10911000 11355000 34629 888 13126 13486 54089 54089 TLEFAGQDLSAYLLK 15 1 0 Unmodified _TLEFAGQDLSAYLLK_ 0 0 0 Q9H568 Q9H568 Q9H568 ACTL8 Actin-like protein 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.9461 2 834.945795 1667.87704 NaN NaN NaN 0.40757 0.0003403 NaN NaN NaN NaN 123.22 0.61889 123.22 122.99 123.61 -7.6294E-06 0 0 0 4.9481E-32 3 81778 149.38 127.39 1 NaN NaN 0 5984500 5984500 0 34630 2034 13127 13487 54090;54091;54092 54090 TLEFNRR 7 0 2 Unmodified _TLEFNRR_ 0 0 1 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 312.8408 3 312.506764 934.498464 NaN NaN NaN -0.15447 -4.8273E-05 NaN NaN NaN NaN 23.975 0.35144 23.975 23.813 24.164 0 0 0 0 0.027338 1 9729 41.502 21.716 1 NaN NaN 0 3930000 3930000 0 34631 1965 13128 13488 54093 54093 TLEGELHDLR 10 0 1 Unmodified _TLEGELHDLR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 398.2116 3 394.875293 1181.60405 98544.98 0.074268 2.9327E-05 0.75995 0.00030008 0.83421 0.00032941 394.875406530481 398.211613088255 55.235 0.84013 55.235 54.865 55.705 0 253 77 6 0 0 0 0.0010907 2 30941 65.5 52.885 1 1.2902 1.3152 0 30430000 15175000 15256000 34632 1440 13129 13489 54094;54095 54094 TLEGELHDLR 10 0 1 Unmodified _TLEGELHDLR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 398.2131 3 394.875293 1181.60405 99302.9 0.29217 0.00011537 0.58718 0.00023186 0.87935 0.00034723 394.875425591625 398.211501151105 53.836 0.72485 53.836 53.497 54.222 0 300 69 6 0 0 0 2.9918E-05 2 30715 83.862 62.774 1 1.1384 1.3183 0 57376000 23817000 33559000 34633 1440 13129 13489 54096;54097 54097 TLEGELHDLR 10 0 1 Unmodified _TLEGELHDLR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.8142 2 591.809302 1181.60405 NaN NaN NaN 0.87442 0.00051749 NaN NaN NaN NaN 53.842 0.52512 53.842 53.527 54.052 0 0 0 0 0.0044491 1 30702 72.607 56.067 1 NaN NaN 0 16237000 0 16237000 34634 1440 13129 13489 54098 54098 TLEGELHDLR 10 0 1 Unmodified _TLEGELHDLR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.8091 2 591.809302 1181.60405 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.741 1 53.741 53.241 54.241 0 0 0 0 0.023936 1 30710 52.579 22.324 1 34635 1440 13129 13489 54099 54099 TLEGELHDLR 10 0 1 Unmodified _TLEGELHDLR_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;Q5TCI8;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.813 2 591.809302 1181.60405 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.757 1 53.757 53.257 54.257 0 0 0 0 0.0085409 1 30716 59.426 27.492 1 34636 1440 13129 13489 54100 54100 TLELQGLINDLQR 13 0 1 Unmodified _TLELQGLINDLQR_ 0 0 0 P15924 P15924 P15924 DSP Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.9236 2 756.922655 1511.83076 71686.45 0.91202 0.00069033 0.67318 0.00050955 1.5852 0.0011999 756.922695356173 761.927240067081 118.86 0.56848 118.86 118.59 119.16 -7.6294E-06 139 32 7 0 0 0 1.2827E-23 3 76290 177.44 177.44 1 0.3442 0.35687 0 20589000 14789000 5800400 34637 1486 13130 13490 54101;54102;54103 54101 TLELQGLINDLQR 13 0 1 Unmodified _TLELQGLINDLQR_ 0 0 0 P15924 P15924 P15924 DSP Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.9232 2 756.922655 1511.83076 71486.02 0.52633 0.00039839 0.31891 0.00024139 0.84524 0.00063978 756.922826682043 761.926972210333 118.3 0.58859 118.3 118.11 118.7 7.6294E-06 134 35 5 0 0 0 2.4985E-15 2 77722 152.07 152.07 1 0.36714 0.36402 0 15790000 11112000 4677400 34638 1486 13130 13490 54104;54105 54104 TLESQAVETEK 11 1 0 Unmodified _TLESQAVETEK_ 0 0 0 B4E074;Q9NVX2;A0A0A0MRH0;K7ERN7 B4E074 B4E074 NLE1 Notchless protein homolog 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 621.819 2 617.811707 1233.60886 77730.06 0.21726 0.00013422 0.46403 0.00028668 0.68129 0.00042091 617.811458580022 621.819292867406 32.816 0.32011 32.816 32.616 32.936 0 57 15 7 0 0 0 0.00028675 1 14255 89.047 51.572 1 1.7653 1.3933 0 5983300 2408000 3575300 34639 1060 13131 13491 54106 54106 TLETHIK 7 1 0 Unmodified _TLETHIK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 425.2499 2 421.242535 840.470518 93231.86 -0.67388 -0.00028387 0.88382 0.0003723 0.20994 8.8434E-05 421.242779636034 425.249905769938 21.417 0.49106 21.417 21.247 21.738 0 57 16 6 0 0 0 0.059659 1 6480 50.632 5.9106 1 1.6014 1.2693 0 4756600 1849500 2907100 34640 878 13132 13492 54107 54107 TLETVPLER 9 0 1 Unmodified _TLETVPLER_ 0 0 0 P22626;A0A087WUI2 P22626 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.7841 2 529.298039 1056.58152 82810.85 0.31999 0.00016937 0.46125 0.00024414 0.78124 0.00041351 529.297974261235 534.302426602954 61.43 0.87164 61.43 61.163 62.035 0 242 69 6 0 0 0 0.0018198 1 35148 80.438 57.946 1 2.3891 2.4505 0 25849000 8032800 17816000 34641 1508 13133 13493 54108 54108 TLETVPLER 9 0 1 Unmodified _TLETVPLER_ 0 0 0 P22626;A0A087WUI2 P22626 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.2985 2 529.298039 1056.58152 83572.82 0.29081 0.00015392 0.19198 0.00010162 0.48279 0.00025554 529.297788255919 534.302395329767 60.107 0.66745 60.107 59.882 60.55 0 154 42 5 0 0 0 0.00023824 2 35153 105.14 89.696 1 2.585 2.7883 0 26237000 7730400 18507000 34642 1508 13133 13493 54109;54110 54110 TLETVPLER 9 0 1 Unmodified _TLETVPLER_ 0 0 0 P22626;A0A087WUI2 P22626 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.3024 2 529.298039 1056.58152 83487.03 0.10493 5.554E-05 0.19504 0.00010324 0.29997 0.00015878 529.298098236541 534.302480552179 70.661 0.56441 70.661 70.493 71.058 0 117 36 4 0 0 0 0.020055 1 37106 50.607 41.744 1 1.3737 1.1901 0 2538600 835520 1703000 34643 1508 13133 13493 54111 54111 TLFATEDALEVR 12 0 1 Unmodified _TLFATEDALEVR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.8621 2 682.856449 1363.69835 72955.07 0.74023 0.00050547 -0.27375 -0.00018693 0.46648 0.00031854 682.85662004339 687.860249768328 95.634 1.0905 95.634 95.122 96.212 0 294 88 6 0 0 0 1.7582E-05 3 58100 104.52 99.617 1 1.1169 1.1326 0 28074000 13198000 14876000 34644 1088;1189 13134 13494 54112;54113;54114 54114 TLFATEDALEVR 12 0 1 Unmodified _TLFATEDALEVR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.8602 2 682.856449 1363.69835 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.144 1 95.144 94.644 95.644 -7.6294E-06 0 0 0 6.3616E-12 1 59213 120.09 92.348 1 34645 1088;1189 13134 13494 54115 54115 TLFATEDALEVR 12 0 1 Unmodified _TLFATEDALEVR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.8618 2 682.856449 1363.69835 73775.49 0.74519 0.00050886 -0.045047 -3.0761E-05 0.70015 0.0004781 682.856582927459 687.860727323814 108.8 0.65522 108.8 108.54 109.2 0 102 32 5 0 0 0 0.00042215 2 62510 71.221 66.609 1 1.5946 1.3423 0 4554600 2005300 2549200 34646 1088;1189 13134 13494 54116;54117 54117 TLFATEDALEVR 12 0 1 Unmodified _TLFATEDALEVR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.8617 2 682.856449 1363.69835 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.62 1 108.62 108.12 109.12 -7.6294E-06 0 0 0 6.8962E-05 1 61537 91.855 64.112 1 34647 1088;1189 13134 13494 54118 54118 TLFGFLGK 8 1 0 Unmodified _TLFGFLGK_ 0 0 0 Q05519;Q05BU6;Q6PJY9;Q6PKC9;Q5T760;Q6PJB9;S4R3C4;B4DWT1;B4DTC1 Q05519 Q05519 SRSF11;SFRS11 Serine/arginine-rich splicing factor 11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.7658 2 441.757821 881.501089 NaN NaN NaN -0.06429 -2.84E-05 NaN NaN NaN NaN 108.61 0.29015 108.61 108.41 108.7 0 0 0 0 0.051482 1 67877 49.358 24.36 1 NaN NaN 0 3499400 0 3499400 34648 1684 13135 13495 54119 54119 TLFPLIEAK 9 1 0 Unmodified _TLFPLIEAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.3104 2 516.310418 1030.60628 84487.75 0.59291 0.00030612 -0.12034 -6.2132E-05 0.47257 0.00024399 516.310322074543 520.317295755764 107.05 1.2484 107.05 106.56 107.81 -7.6294E-06 510 94 6 0 0 0 0.005479 2 66344 66.621 66.621 1 0.36746 0.42311 0 210010000 152390000 57618000 34649 1476 13136 13496 54120;54121 54120 TLFPLIEAK 9 1 0 Unmodified _TLFPLIEAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.3104 2 516.310418 1030.60628 84614.84 0.65135 0.0003363 -0.14172 -7.3172E-05 0.50963 0.00026313 516.310297107003 520.317296471711 106.19 1.4132 106.19 105.79 107.2 -7.6294E-06 559 105 7 0 0 0 0.0018407 3 67934 80.165 80.165 1 0.36264 0.42345 0 274550000 198270000 76284000 34650 1476 13136 13496 54122;54123;54124 54124 TLFPLIEAK 9 1 0 Unmodified _TLFPLIEAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.3105 2 516.310418 1030.60628 84653.52 0.61603 0.00031806 -0.10541 -5.4423E-05 0.51062 0.00026364 516.310294766991 520.317367833976 118.36 1.6273 118.36 118.02 119.65 7.6294E-06 332 71 8 0 0 0 0.0019814 2 69756 78.334 78.334 1 0.30162 0.25135 0 48171000 36318000 11853000 34651 1476 13136 13496 54125;54126 54125 TLFPLIEAK 9 1 0 Unmodified _TLFPLIEAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.3105 2 516.310418 1030.60628 84175.27 0.38298 0.00019774 -0.017201 -8.881E-06 0.36578 0.00018886 516.310317757742 520.317414773251 118.1 1.6101 118.1 117.75 119.36 0 397 73 9 0 0 0 0.029116 2 69216 46.39 46.39 1 0.30401 0.25433 0 44832000 34145000 10687000 34652 1476 13136 13496 54127;54128 54128 TLFSNIVLSGGSTLFK 16 1 0 Unmodified _TLFSNIVLSGGSTLFK_ 0 0 0 B4DMT4;B4DXP9;R4GMT0;B4DM97;P61163 B4DMT4 B4DMT4 ACTR1A Alpha-centractin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.4772 2 842.469438 1682.92432 NaN NaN NaN -0.24802 -0.00020895 NaN NaN NaN NaN 127.65 0.51724 127.65 127.49 128 0 0 0 0 6.8176E-09 1 83177 101.6 83.786 1 NaN NaN 0 5101400 0 5101400 34653 1004 13137 13497 54129 54129 TLFSNIVLSGGSTLFK 16 1 0 Unmodified _TLFSNIVLSGGSTLFK_ 0 0 0 B4DMT4;B4DXP9;R4GMT0;B4DM97;P61163 B4DMT4 B4DMT4 ACTR1A Alpha-centractin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.9789 2 842.469438 1682.92432 NaN NaN NaN 0.07755 6.5334E-05 NaN NaN NaN NaN 127.31 0.46084 127.31 127.11 127.57 0 0 0 0 3.5212E-18 1 84947 119.39 86.157 1 NaN NaN 0 4463400 0 4463400 34654 1004 13137 13497 54130 54130 TLFSNIVLSGGSTLFK 16 1 0 Unmodified _TLFSNIVLSGGSTLFK_ 0 0 0 B4DMT4;B4DXP9;R4GMT0;B4DM97;P61163 B4DMT4 B4DMT4 ACTR1A Alpha-centractin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.4734 2 842.469438 1682.92432 NaN NaN NaN 1.6535 0.001393 NaN NaN NaN NaN 127.27 0.28872 127.27 127.17 127.45 0 0 0 0 3.9387E-06 1 84982 80.69 56.839 1 NaN NaN 0 3156600 3156600 0 34655 1004 13137 13497 54131 54131 TLFVLNVPPYCTEESLSR 18 0 1 Unmodified _TLFVLNVPPYCTEESLSR_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1068.0409 2 1063.03535 2124.05614 59010.04 0.77013 0.00081867 -0.82787 -0.00088006 -0.057746 -6.1387E-05 1063.53605614192 1068.54056618805 119.62 0.86364 119.62 119.29 120.16 0 223 58 5 0 0 0 8.1372E-12 2 76911 106.49 106.49 1 0.88462 0.92404 0 13239000 8149500 5089300 34656 2133 13138 13498 54132;54133 54133 TLFVLNVPPYCTEESLSR 18 0 1 Unmodified _TLFVLNVPPYCTEESLSR_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1063.0369 2 1063.03535 2124.05614 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.03 1 119.03 118.53 119.53 0 0 0 0 9.4859E-06 1 78404 79.492 61.826 1 34657 2133 13138 13498 54134 54134 TLGDFAAEYAK 11 1 0 Unmodified _TLGDFAAEYAK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.2938 2 593.292953 1184.57135 79060.35 0.57011 0.00033824 0.39022 0.00023151 0.96033 0.00056976 593.292968425706 597.300254937808 76.744 1.4921 76.744 76.333 77.825 0 724 124 9 0 0 0 1.2643E-05 2 45200 107.79 107.79 1 0.63036 0.72659 0 214210000 134550000 79662000 34658 139 13139 13499 54135;54136 54135 TLGDFAAEYAK 11 1 0 Unmodified _TLGDFAAEYAK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.3003 2 593.292953 1184.57135 78987.06 0.52675 0.00031252 0.24103 0.000143 0.76778 0.00045552 593.292894215323 597.300144043364 75.907 1.4169 75.907 75.343 76.76 0 711 120 8 0 0 0 3.1396E-05 5 45587 100.48 94.306 1 0.61827 0.72299 0 291600000 189660000 101950000 34659 139 13139 13499 54137;54138;54139;54140;54141 54138 TLGDFAAEYAK 11 1 0 Unmodified _TLGDFAAEYAK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.3002 2 593.292953 1184.57135 78921.3 0.50084 0.00029715 0.21445 0.00012723 0.7153 0.00042438 593.293017244715 597.30005563059 87.683 1.7979 87.683 87.168 88.966 -7.6294E-06 589 111 8 0 0 0 0.0036568 2 48532 59.426 56.17 1 1.1439 0.93572 0 34676000 16369000 18308000 34660 139 13139 13499 54142;54143 54143 TLGDFAAEYAK 11 1 0 Unmodified _TLGDFAAEYAK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3;Q05D33;Q6PJL0 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.3005 2 593.292953 1184.57135 78936.95 0.5384 0.00031943 0.15777 9.3607E-05 0.69617 0.00041303 593.292904422188 597.300058423701 87.84 2.1187 87.84 87.14 89.258 0 587 125 8 0 0 0 0.0042422 4 47913 58.37 58.37 1 1.1457 0.95153 0 36927000 16942000 19985000 34661 139 13139 13499 54144;54145;54146;54147 54146 TLGDTGFMPPDK 12 1 0 Oxidation (M) _TLGDTGFM(ox)PPDK_ TLGDTGFM(1)PPDK TLGDTGFM(97.46)PPDK 0 1 0 Q96HS1;F5GXG4 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8101 2 647.802828 1293.5911 76799.03 0.51541 0.00033388 -0.18404 -0.00011922 0.33136 0.00021466 647.802830344668 651.809934320326 58.485 0.87838 58.485 58.034 58.912 3.8147E-06 325 71 7 0 0 0 3.4675E-05 1 33003 97.456 84.419 1 2.3577 2.5382 0 33372000 9601200 23771000 34662 1972 13140 13500 54148 54148 1815 TLGDTGFMPPDK 12 1 0 Oxidation (M) _TLGDTGFM(ox)PPDK_ TLGDTGFM(1)PPDK TLGDTGFM(93.1)PPDK 0 1 0 Q96HS1;F5GXG4 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8104 2 647.802828 1293.5911 74745.5 0.72514 0.00046975 0.063303 4.1008E-05 0.78845 0.00051076 647.802905148533 651.810108813454 57.437 0.86987 57.437 57.12 57.99 0 305 69 7 0 0 0 7.0737E-05 2 33119 93.096 83.679 1 2.4491 2.7588 0 58937000 16328000 42609000 34663 1972 13140 13500 54149;54150 54149 1815 TLGECGFTSQTAR 13 0 1 Unmodified _TLGECGFTSQTAR_ 0 0 0 B8ZZU8;I3L0M9;Q15370 B8ZZU8 B8ZZU8 TCEB2 Transcription elongation factor B polypeptide 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 719.3381 2 714.332815 1426.65108 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.998 1 44.998 44.498 45.498 0 0 0 0 0.0068204 1 24210 56.359 43.006 1 34664 1117 13141 13501 54151 54151 TLGECGFTSQTAR 13 0 1 Unmodified _TLGECGFTSQTAR_ 0 0 0 B8ZZU8;I3L0M9;Q15370 B8ZZU8 B8ZZU8 TCEB2 Transcription elongation factor B polypeptide 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.3365 2 714.332815 1426.65108 NaN NaN NaN 0.32827 0.00023449 NaN NaN NaN NaN 44.045 0.10194 44.045 43.987 44.089 0 0 0 0 0.0041613 1 24008 62.466 48.259 1 NaN NaN 0 2353800 0 2353800 34665 1117 13141 13501 54152 54152 TLGECGFTSQTARPQAPATVGLAFR 25 0 2 Unmodified _TLGECGFTSQTARPQAPATVGLAFR_ 0 0 1 B8ZZU8;I3L0M9;Q15370 B8ZZU8 B8ZZU8 TCEB2 Transcription elongation factor B polypeptide 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.1178 3 879.4465 2635.31767 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.151 1 94.151 93.651 94.651 0 0 0 0 0.032857 1 58502 30.249 16.233 1 34666 1117 13142 13502 54153 54153 TLGFNLESGWGSGR 14 0 1 Unmodified _TLGFNLESGWGSGR_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;Q05DQ5;Q05DF7;Q05BZ6 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.8625 2 740.862597 1479.71064 NaN NaN NaN -0.70066 -0.00051909 NaN NaN NaN NaN 103.22 0.34016 103.22 103 103.34 0 0 0 0 0.014936 1 65146 48.741 28.954 1 NaN NaN 0 4144200 4144200 0 34667 512 13143 13503 54154 54154 TLGHNLLVSELYNQLK 16 1 0 Unmodified _TLGHNLLVSELYNQLK_ 0 0 0 Q13619;A0A0A0MR50;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.6809 3 614.675509 1841.0047 79043.73 0.7725 0.00047484 -0.38639 -0.0002375 0.38611 0.00023733 614.67533143893 617.680440485912 111.05 1.0605 111.05 110.65 111.71 0 289 72 6 0 0 0 8.8205E-09 3 69695 75.911 75.911 1 0.90459 0.99309 0 53568000 27488000 26081000 34668 1718 13144 13504 54155;54156;54157 54156 TLGHNLLVSELYNQLK 16 1 0 Unmodified _TLGHNLLVSELYNQLK_ 0 0 0 Q13619;A0A0A0MR50;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.6755 3 614.675509 1841.0047 77780.53 0.5982 0.0003677 -0.70657 -0.00043431 -0.10836 -6.6608E-05 614.675346874463 617.68045214419 109.88 0.95741 109.88 109.39 110.35 0 295 62 7 0 0 0 4.5411E-09 2 70513 79.394 75.733 1 0.89279 0.90514 0 29486000 14144000 15342000 34669 1718 13144 13504 54158;54159 54158 TLGHNLLVSELYNQLK 16 1 0 Unmodified _TLGHNLLVSELYNQLK_ 0 0 0 Q13619;A0A0A0MR50;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 615.0098 3 614.675509 1841.0047 77876.98 0.44373 0.00027275 0.61114 0.00037566 1.0549 0.00064841 615.010070770784 617.347404765157 120.61 0.68349 120.61 120.44 121.12 0 176 32 8 0 0 0 0.00019342 3 71589 36.593 36.593 1 0.88105 0.70403 0 20359000 10563000 9795200 34670 1718 13144 13504 54160;54161;54162 54161 TLGHNLLVSELYNQLK 16 1 0 Unmodified _TLGHNLLVSELYNQLK_ 0 0 0 Q13619;A0A0A0MR50;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 925.5182 2 921.509625 1841.0047 NaN NaN NaN 0.062076 5.7204E-05 NaN NaN NaN NaN 120.59 0.31871 120.59 120.48 120.8 0 0 0 0 0.0026857 1 71649 59.116 45.689 1 NaN NaN 0 1914200 0 1914200 34671 1718 13144 13504 54163 54163 TLGHNLLVSELYNQLK 16 1 0 Unmodified _TLGHNLLVSELYNQLK_ 0 0 0 Q13619;A0A0A0MR50;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.3486 3 614.675509 1841.0047 77707.92 0.70907 0.00043585 0.41105 0.00025266 1.1201 0.00068851 614.67559881233 617.347162906298 120.26 0.84193 120.26 119.98 120.83 0 221 42 10 0 0 0 0.00012455 2 70398 36.029 36.029 1 0.9736 0.78164 0 14000000 7375800 6624100 34672 1718 13144 13504 54164;54165 54164 TLGHNLLVSELYNQLK 16 1 0 Unmodified _TLGHNLLVSELYNQLK_ 0 0 0 Q13619;A0A0A0MR50;B4DKT2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 925.5173 2 921.509625 1841.0047 63827.59 0.66008 0.00060827 -1.0205 -0.00094043 -0.36044 -0.00033215 921.509240807742 925.516708438064 120.25 0.4931 120.25 120.1 120.59 -7.6294E-06 84 28 6 0 0 0 0.0001547 1 70517 70.889 70.889 1 1.0344 0.84083 0 4489400 2048300 2441100 34673 1718 13144 13504 54166 54166 TLGILGLGR 9 0 1 Unmodified _TLGILGLGR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2914 2 450.287277 898.560001 90951.46 0.24728 0.00011135 0.031233 1.4064E-05 0.27851 0.00012541 450.287277303963 455.29132276256 96.888 1.3837 96.888 96.414 97.798 0 342 120 5 0 0 0 0.0028606 2 59276 73.26 41.325 1 2.7777 2.8231 0 29421000 8251900 21169000 34674 1382 13145 13505 54167;54168 54167 TLGILGLGR 9 0 1 Unmodified _TLGILGLGR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.2914 2 450.287277 898.560001 91222.13 0.38689 0.00017421 -0.09943 -4.4772E-05 0.28746 0.00012944 450.287141886438 455.291318559101 95.923 1.3326 95.923 95.398 96.731 0 392 112 5 0 0 0 0.0066845 2 60038 63.565 35.391 1 2.9121 3.3322 0 86644000 21529000 65116000 34675 1382 13145 13505 54169;54170 54170 TLGILGLGR 9 0 1 Unmodified _TLGILGLGR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.2875 2 450.287277 898.560001 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.341 1 96.341 95.841 96.841 0 0 0 0 0.012994 1 60080 60.76 28.289 1 34676 1382 13145 13505 54171 54171 TLGILGLGR 9 0 1 Unmodified _TLGILGLGR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 455.2914 2 450.287277 898.560001 90604.27 0.2789 0.00012558 -0.049606 -2.2337E-05 0.22929 0.00010325 450.287241845273 455.291261994242 109.72 1.091 109.72 109.23 110.32 0 148 54 4 0 0 0 0.029026 1 62981 46.426 30.987 1 1.7798 1.4933 0 4177500 1605100 2572400 34677 1382 13145 13505 54172 54172 TLGILGLGR 9 0 1 Unmodified _TLGILGLGR_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 455.2921 2 450.287277 898.560001 92505.36 0.20218 9.104E-05 0.059803 2.6928E-05 0.26199 0.00011797 450.287212533096 455.291425558292 109.39 1.1273 109.39 109.08 110.21 7.6294E-06 118 54 4 0 0 0 0.029026 2 62283 46.426 31.65 1 1.9164 1.6684 0 2617900 959570 1658300 34678 1382 13145 13505 54173;54174 54174 TLGTPTQPGSTPR 13 0 1 Unmodified _TLGTPTQPGSTPR_ 0 0 0 A8K3Z5;Q8NFH5 A8K3Z5 A8K3Z5 NUP35 Nucleoporin NUP53 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.8469 2 656.846416 1311.67828 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.378 1 32.378 31.878 32.878 0 0 0 0 0.023679 1 16103 56.359 34.896 1 34679 729 13146 13506 54175 54175 TLGTPTQPGSTPR 13 0 1 Unmodified _TLGTPTQPGSTPR_ 0 0 0 A8K3Z5;Q8NFH5 A8K3Z5 A8K3Z5 NUP35 Nucleoporin NUP53 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.8503 2 656.846416 1311.67828 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.408 1 32.408 31.908 32.908 0 0 0 0 0.0046966 1 16119 59.542 31.8 1 34680 729 13146 13506 54176 54176 TLGVDLVALATR 12 0 1 Unmodified _TLGVDLVALATR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8671 2 614.86662 1227.71869 78946.93 0.59234 0.00036421 1.1327 0.00069645 1.725 0.0010607 614.866697693062 619.870634284207 115.43 0.70835 115.43 115.18 115.89 7.6294E-06 177 47 7 0 0 0 0.00016719 2 73356 91.855 72.584 1 0.73962 0.74683 0 9576200 6006800 3569400 34681 1259 13147 13507 54177;54178 54177 TLGVDLVALATR 12 0 1 Unmodified _TLGVDLVALATR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.8708 2 614.86662 1227.71869 78004.24 0.58393 0.00035904 0.61854 0.00038032 1.2025 0.00073936 614.866608194629 619.870594578355 114.83 0.60493 114.83 114.54 115.15 0 170 38 6 0 0 0 0.00018715 2 74729 90.685 62.9 1 0.71666 0.71136 0 16032000 7596400 8435700 34682 1259 13147 13507 54179;54180 54180 TLGVDLVALATR 12 0 1 Unmodified _TLGVDLVALATR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.8672 2 614.86662 1227.71869 78912.18 0.43537 0.00026769 0.24304 0.00014944 0.67841 0.00041713 614.866700625508 619.871048666812 127.13 0.67818 127.13 126.86 127.54 0 99 29 5 0 0 0 0.0050534 2 76680 51.927 32.14 1 0.60914 0.52885 0 1930400 1190000 740380 34683 1259 13147 13507 54181;54182 54182 TLGVQRPK 8 1 1 Unmodified _TLGVQRPK_ 0 0 1 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 300.1872 3 300.187143 897.5396 112542.4 -0.26512 -7.9586E-05 0.32358 9.7133E-05 0.058454 1.7547E-05 300.187196498236 306.194529357961 19.953 0.34842 19.953 19.828 20.176 0 22 9 5 0 0 0 0.032397 1 6473 36.701 22.032 1 0.70298 0.76046 0 14924000 8172400 6751900 34684 1997 13148 13508 54183 54183 TLGVQRPK 8 1 1 Unmodified _TLGVQRPK_ 0 0 1 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.7768 2 449.777077 897.5396 89377.52 -0.46937 -0.00021111 0.12561 5.6496E-05 -0.34376 -0.00015461 449.777168364258 458.788620115984 19.69 0.56545 19.69 19.507 20.073 0 76 25 6 0 0 0 0.034629 1 6050 97.071 82.295 1 0.79679 0.93754 0 77902000 42992000 34910000 34685 1997 13148 13508 54184 54184 TLGVQRPK 8 1 1 Unmodified _TLGVQRPK_ 0 0 1 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 300.1865 3 300.187143 897.5396 109073.1 -0.30458 -9.143E-05 0.1053 3.1611E-05 -0.19927 -5.9818E-05 300.186970048848 306.194500541512 19.691 0.31938 19.691 19.568 19.888 0 48 14 5 0 0 0 0.03333 2 6068 36.395 21.722 1 0.82854 0.93671 0 15592000 8765400 6826300 34686 1997 13148 13508 54185;54186 54185 TLHCEGTEINSDDEQESK 18 1 0 Unmodified _TLHCEGTEINSDDEQESK_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.6348 3 697.963895 2090.86986 73016.16 0.18101 0.00012634 0.021684 1.5135E-05 0.20269 0.00014147 698.298144534915 700.969757926213 23.295 0.45345 23.295 23.103 23.556 0 96 21 7 0 0 0 2.5727E-12 3 9166 89.468 87.959 1 1.1433 1.1608 0 13591000 6252800 7338400 34687 1995;1289 13149 13509 54187;54188;54189 54187 TLHCEGTEINSDDEQESK 18 1 0 Unmodified _TLHCEGTEINSDDEQESK_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.299 3 697.963895 2090.86986 72901.07 0.3235 0.00022579 -0.009633 -6.7235E-06 0.31387 0.00021907 697.963692961079 700.635283642842 22.967 0.3788 22.967 22.823 23.202 0 74 15 6 0 0 0 2.3248E-40 2 8849 125.41 122.02 1 1.1569 1.1913 0 18095000 7499600 10596000 34688 1995;1289 13149 13509 54190;54191 54191 TLHCEGTEINSDDEQESK 18 1 0 Unmodified _TLHCEGTEINSDDEQESK_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1046.4453 2 1046.4422 2090.86986 NaN NaN NaN 0.39094 0.0004091 NaN NaN NaN NaN 22.949 0.15029 22.949 22.843 22.994 0 0 0 0 0.037637 1 8905 32.624 27.308 1 NaN NaN 0 3166300 3166300 0 34689 1995;1289 13149 13509 54192 54192 TLHCEGTEINSDDEQESK 18 1 0 Unmodified _TLHCEGTEINSDDEQESK_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 700.636 3 697.963895 2090.86986 72468.36 0.35605 0.00024851 0.35638 0.00024874 0.71243 0.00049725 698.298223124626 700.635567155358 26.238 0.60383 26.238 25.968 26.572 0 134 25 8 0 0 0 5.0709E-06 2 9917 51.971 51.864 1 1.5912 1.2619 0 4621300 2010300 2611000 34690 1995;1289 13149 13509 54193;54194 54194 TLHCEGTEINSDDEQESK 18 1 0 Unmodified _TLHCEGTEINSDDEQESK_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.9694 3 697.963895 2090.86986 72850.09 0.34283 0.00023928 0.29484 0.00020579 0.63766 0.00044507 698.298145776868 700.635395701933 26.45 0.6054 26.45 26.217 26.822 0 136 28 8 0 0 0 1.2237E-05 3 9436 42.716 42.716 1 1.5128 1.1779 0 3521000 1535100 1985900 34691 1995;1289 13149 13509 54195;54196;54197 54195 TLHEVSLQESIR 12 0 1 Unmodified _TLHEVSLQESIR_ 0 0 0 Q05CW7 Q05CW7 Q05CW7 NAT10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.5925 3 471.256174 1410.74669 89516.38 0.41529 0.00019571 0.24045 0.00011331 0.65574 0.00030902 471.25633464407 474.591981145436 54.375 1.1767 54.375 53.998 55.175 3.8147E-06 484 106 8 0 0 0 6.6676E-06 2 30570 81.625 71.837 1 0.76442 0.9042 0 296970000 155010000 141960000 34692 1687 13150 13510 54198;54199 54198 TLHEVSLQESIR 12 0 1 Unmodified _TLHEVSLQESIR_ 0 0 0 Q05CW7 Q05CW7 Q05CW7 NAT10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.5928 3 471.256174 1410.74669 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.566 1 54.566 54.066 55.066 0 0 0 0 2.3775E-06 1 30696 101.89 76.171 1 34693 1687 13150 13510 54200 54200 TLHEVSLQESIR 12 0 1 Unmodified _TLHEVSLQESIR_ 0 0 0 Q05CW7 Q05CW7 Q05CW7 NAT10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2562 3 471.256174 1410.74669 87894.64 -0.13369 -6.3004E-05 0.54106 0.00025498 0.40736 0.00019197 471.256358599234 474.592487186719 52.982 1.0305 52.982 52.507 53.537 0 445 88 8 0 0 0 7.0759E-05 2 30102 64.266 56.355 1 0.88139 1.0117 0 187150000 100070000 87084000 34694 1687 13150 13510 54201;54202 54202 TLHEVSLQESIR 12 0 1 Unmodified _TLHEVSLQESIR_ 0 0 0 Q05CW7 Q05CW7 Q05CW7 NAT10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2573 3 471.256174 1410.74669 NaN NaN NaN 0.6041 0.00028469 NaN NaN NaN NaN 53.823 0.38403 53.823 53.648 54.032 0 0 0 0 0.00060296 1 30729 57.175 29.846 1 NaN NaN 0 6527700 6527700 0 34695 1687 13150 13510 54203 54203 TLHEVSLQESIR 12 0 1 Unmodified _TLHEVSLQESIR_ 0 0 0 Q05CW7 Q05CW7 Q05CW7 NAT10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.5959 3 471.256174 1410.74669 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.758 1 53.758 53.258 54.258 0 0 0 0 0.0015799 1 30717 78.903 52.362 1 34696 1687 13150 13510 54204 54204 TLHEVSLQESIR 12 0 1 Unmodified _TLHEVSLQESIR_ 0 0 0 Q05CW7 Q05CW7 Q05CW7 NAT10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.2557 3 471.256174 1410.74669 87103.73 -0.021246 -1.0012E-05 0.31547 0.00014867 0.29423 0.00013866 471.256301014407 474.592287653688 63.742 1.486 63.742 63.422 64.908 0 657 118 9 0 0 0 6.2153E-05 3 32753 67.385 59.775 1 1.3483 1.159 0 44271000 19580000 24691000 34697 1687 13150 13510 54205;54206;54207 54206 TLHEVSLQESIR 12 0 1 Unmodified _TLHEVSLQESIR_ 0 0 0 Q05CW7 Q05CW7 Q05CW7 NAT10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.3827 2 706.380623 1410.74669 70022.65 0.41826 0.00029545 0.62993 0.00044497 1.0482 0.00074043 706.381201763634 711.8866715184 63.722 0.9095 63.722 63.541 64.451 -3.8147E-06 235 75 6 0 0 0 0.020076 2 32960 39.625 34.311 1 1.0887 0.93567 0 6511700 3708500 2803200 34698 1687 13150 13510 54208;54209 54209 TLHEVSLQESIR 12 0 1 Unmodified _TLHEVSLQESIR_ 0 0 0 Q05CW7 Q05CW7 Q05CW7 NAT10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.5911 3 471.256174 1410.74669 85705.68 0.05299 2.4972E-05 -0.16114 -7.594E-05 -0.10815 -5.0968E-05 471.255946380185 474.591793836747 64.063 1.6294 64.063 63.725 65.354 0 647 132 8 0 0 0 5.955E-06 3 32198 87.001 69.565 1 1.3559 1.1827 0 36337000 14289000 22047000 34699 1687 13150 13510 54210;54211;54212 54210 TLHLQTGNLLNWGR 14 0 1 Unmodified _TLHLQTGNLLNWGR_ 0 0 0 D3DT44;P48507 D3DT44 D3DT44 GCLM Glutamate--cysteine ligase regulatory subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.9669 3 541.630234 1621.86887 NaN NaN NaN -0.30102 -0.00016304 NaN NaN NaN NaN 99.469 0.55919 99.469 99.288 99.847 0 0 0 0 0.0045914 1 62400 48.527 40.551 1 NaN NaN 0 4761300 0 4761300 34700 1188 13151 13511 54213 54213 TLIDDDNPPVSFVK 14 1 0 Unmodified _TLIDDDNPPVSFVK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.4083 2 780.401221 1558.78789 69166.38 0.58171 0.00045397 0.48316 0.00037706 1.0649 0.00083102 780.401043025834 784.408322941775 99.775 0.89973 99.775 99.289 100.19 0 276 75 6 0 0 0 0.00021786 1 60938 77.305 77.305 1 0.84189 0.83394 0 25850000 14126000 11724000 34701 1630 13152 13512 54214 54214 TLIDDDNPPVSFVK 14 1 0 Unmodified _TLIDDDNPPVSFVK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.4081 2 780.401221 1558.78789 NaN NaN NaN 0.50261 0.00039224 NaN NaN NaN NaN 99.189 0.79523 99.189 98.825 99.62 0 0 0 0 8.4016E-05 1 62093 89.9 76.809 1 NaN NaN 0 19199000 0 19199000 34702 1630 13152 13512 54215 54215 TLIDDDNPPVSFVK 14 1 0 Unmodified _TLIDDDNPPVSFVK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.9106 2 780.401221 1558.78789 69368.68 0.958 0.00074762 0.14674 0.00011452 1.1047 0.00086214 780.902778102197 784.910295881572 112.01 0.84157 112.01 111.77 112.61 7.6294E-06 255 50 8 0 0 0 0.00016787 2 64993 88.441 88.441 1 1.9049 1.5081 0 18472000 7264500 11208000 34703 1630 13152 13512 54216;54217 54216 TLIDDDNPPVSFVK 14 1 0 Unmodified _TLIDDDNPPVSFVK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.4091 2 780.401221 1558.78789 68861.79 0.65685 0.00051261 0.56171 0.00043836 1.2186 0.00095097 780.903095533642 784.408310993879 112.05 1.0533 112.05 111.73 112.78 0 256 55 8 0 0 0 0.00024907 3 63961 80.245 74.004 1 1.7605 1.4509 0 10773000 3933600 6839400 34704 1630 13152 13512 54218;54219;54220 54218 TLIEAGLPQK 10 1 0 Unmodified _TLIEAGLPQK_ 0 0 0 B2R7W4;O43390;B4DMB1 B2R7W4 B2R7W4 HNRNPR Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.3237 2 535.316232 1068.61791 84288.48 0.59049 0.0003161 -0.17487 -9.3609E-05 0.41562 0.00022249 535.315848074311 539.323070353968 64.777 0.30638 64.777 64.602 64.908 0 84 25 5 0 0 0 0.00096714 1 38135 78.334 68.629 1 1.7273 1.7589 0 16971000 6241500 10730000 34705 855 13153 13513 54221 54221 TLIEELK 7 1 0 Unmodified _TLIEELK_ 0 0 0 Q53X93;Q5U0J5;P16220;Q53RU9;E9PAR2;Q59FC7;G5E998;B2R8K4;F1JVV6;F1JVV5;P18846 Q53X93 Q53X93 CREB1;CREM;EWSR1/ATF1 fusion;ATF1 Cyclic AMP-responsive element-binding protein 1;Cyclic AMP-dependent transcription factor ATF-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.2518 2 423.252569 844.490584 94233.87 -0.091557 -3.8752E-05 -0.90859 -0.00038456 -1.0001 -0.00042332 423.25212233174 427.259029049241 64.738 0.82367 64.738 64.442 65.265 0 332 74 6 0 0 0 0.030326 1 37138 68.915 8.127 1 0.58071 0.62802 0 42942000 24670000 18272000 34706 1488 13154 13514 54222 54222 TLIEELK 7 1 0 Unmodified _TLIEELK_ 0 0 0 Q53X93;Q5U0J5;P16220;Q53RU9;E9PAR2;Q59FC7;G5E998;B2R8K4;F1JVV6;F1JVV5;P18846 Q53X93 Q53X93 CREB1;CREM;EWSR1/ATF1 fusion;ATF1 Cyclic AMP-responsive element-binding protein 1;Cyclic AMP-dependent transcription factor ATF-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.2528 2 423.252569 844.490584 92692.29 0.06902 2.9213E-05 -0.91425 -0.00038696 -0.84523 -0.00035775 423.252070788168 427.259120842873 63.429 1.0197 63.429 63.096 64.116 -3.8147E-06 320 88 5 0 0 0 0.032621 1 37141 65.252 7.9712 1 0.58686 0.63617 0 38973000 22905000 16068000 34707 1488 13154 13514 54223 54223 TLITFAGMIPYR 12 0 1 Oxidation (M) _TLITFAGM(ox)IPYR_ TLITFAGM(1)IPYR TLITFAGM(46.89)IPYR 0 1 0 Q8N1F7;A8K897;H3BV15 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.876 2 699.87613 1397.73771 81595.13 0.58072 0.00040643 0.13734 9.6118E-05 0.71806 0.00050255 699.876452177255 704.880388830102 108.02 0.35369 108.02 107.94 108.29 0 68 26 5 0 0 0 0.0047267 1 67401 46.891 35.74 1 2.1951 2.2504 0 6540800 3084900 3455900 34708 1904 13155 13515 54224 54224 1743 TLITFAGMIPYR 12 0 1 Oxidation (M) _TLITFAGM(ox)IPYR_ TLITFAGM(1)IPYR TLITFAGM(62.46)IPYR 0 1 0 Q8N1F7;A8K897;H3BV15 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.8812 2 699.87613 1397.73771 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.93 1 107.93 107.43 108.43 7.6294E-06 0 0 0 0.0028212 1 67308 62.463 39.144 1 34709 1904 13155 13515 54225 54225 1743 TLKPEGNILR 10 1 1 Unmodified _TLKPEGNILR_ 0 0 1 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;M0QZ34;M0QZU5;M0QYZ9;Q9P0B0 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 386.9033 3 380.896029 1139.66626 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.342 1 39.342 38.842 39.842 0 0 0 0 0.00026739 1 20835 70.908 37.018 1 34710 1068 13156 13516 54226 54226 TLLADQGEIR 10 0 1 Unmodified _TLLADQGEIR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.3118 2 558.306395 1114.59824 81516.12 0.75417 0.00042106 0.064527 3.6026E-05 0.8187 0.00045708 558.306348341627 563.310575679006 55.837 0.93573 55.837 55.537 56.472 0 354 74 8 0 0 0 0.00038137 2 31323 88.136 67.397 1 0.73121 0.82568 0 101250000 55100000 46152000 34711 168 13157 13517 54227;54228 54228 TLLADQGEIR 10 0 1 Unmodified _TLLADQGEIR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.3101 2 558.306395 1114.59824 80430.05 0.51266 0.00028622 -0.0010095 -5.6359E-07 0.51165 0.00028566 558.306319156671 563.310583397973 54.877 0.87244 54.877 54.57 55.442 0 375 69 8 0 0 0 0.00060252 2 31280 84.213 53.139 1 0.769 0.87646 0 101400000 57979000 43421000 34712 168 13157 13517 54229;54230 54230 TLLADQGEIR 10 0 1 Unmodified _TLLADQGEIR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.311 2 558.306395 1114.59824 80209.4 0.52771 0.00029463 0.14351 8.0121E-05 0.67122 0.00037475 558.306590291992 563.310567679896 64.735 1.2623 64.735 64.241 65.503 0 381 92 7 0 0 0 0.001324 3 33452 74.173 62.106 1 1.6666 1.3595 0 15408000 5613300 9794600 34713 168 13157 13517 54231;54232;54233 54233 TLLADQGEIR 10 0 1 Unmodified _TLLADQGEIR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.3109 2 558.306395 1114.59824 80961.23 0.38009 0.00021221 0.21509 0.00012009 0.59518 0.00033229 558.306570304653 563.310611652535 65.166 1.4066 65.166 64.702 66.109 0 432 109 7 0 0 0 0.0025951 2 32906 68.371 50.462 1 1.7498 1.4552 0 15533000 6042800 9490500 34714 168 13157 13517 54234;54235 54235 TLLAILR 7 0 1 Unmodified _TLLAILR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.2737 2 400.273638 798.532724 96148.71 0.21282 8.5188E-05 -0.10755 -4.3051E-05 0.10527 4.2137E-05 400.273452595434 405.277689879209 98.031 1.1607 98.031 97.535 98.695 0 180 96 4 0 0 0 0.013268 1 59787 103.28 9.691 1 1.2374 1.2754 0 19833000 9535400 10298000 34715 560 13158 13518 54236 54236 TLLAILR 7 0 1 Unmodified _TLLAILR_ 0 0 0 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2733 2 400.273638 798.532724 NaN NaN NaN -0.13207 -5.2863E-05 NaN NaN NaN NaN 96.874 0.86932 96.874 96.731 97.6 0 0 0 0 0.03244 1 60371 66.994 0 1 NaN NaN 0 5021400 5021400 0 34716 560 13158 13518 54237 54237 TLLDIDNTR 9 0 1 Unmodified _TLLDIDNTR_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7853 2 530.785296 1059.55604 NaN NaN NaN -0.021485 -1.1404E-05 NaN NaN NaN NaN 69.041 1.7715 69.041 68.476 70.248 0 0 0 0 3.223E-07 2 40231 120.15 65.605 1 NaN NaN 0 554360000 554360000 0 + 34717 1165 13159 13519 54238;54239 54238 TLLDIDNTR 9 0 1 Unmodified _TLLDIDNTR_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7855 2 530.785296 1059.55604 NaN NaN NaN -0.090864 -4.8229E-05 NaN NaN NaN NaN 67.806 2.0658 67.806 67.333 69.399 0 0 0 0 2.9447E-05 1 40444 110.87 53.591 1 NaN NaN 0 449170000 449170000 0 + 34718 1165 13159 13519 54240 54240 TLLDIDNTR 9 0 1 Unmodified _TLLDIDNTR_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7851 2 530.785296 1059.55604 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.398 1 67.398 66.898 67.898 0 0 0 0 0.008895 1 39922 64.654 31.813 1 + 34719 1165 13159 13519 54241 54241 TLLDIDNTR 9 0 1 Unmodified _TLLDIDNTR_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.7855 2 530.785296 1059.55604 NaN NaN NaN -0.11479 -6.0931E-05 NaN NaN NaN NaN 78.509 2.3795 78.509 77.867 80.247 0 0 0 0 0.042946 1 42326 56.258 28.084 1 NaN NaN 0 73078000 73078000 0 + 34720 1165 13159 13519 54242 54242 TLLDSLR 7 0 1 Unmodified _TLLDSLR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 409.2418 2 409.242535 816.470518 98403.98 0.1979 8.0991E-05 -0.054688 -2.2381E-05 0.14322 5.861E-05 409.242184161015 414.246581158135 73.597 0.54777 73.597 73.41 73.958 0 167 51 5 0 0 0 0.022039 1 43117 92.467 37.68 1 1.1798 1.2167 0 36874000 15226000 21647000 34721 907 13160 13520 54243 54243 TLLDSLR 7 0 1 Unmodified _TLLDSLR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 409.2422 2 409.242535 816.470518 98737.54 0.15208 6.2237E-05 -0.013699 -5.6062E-06 0.13838 5.6631E-05 409.242278959961 414.246580199956 72.253 0.69495 72.253 72.059 72.754 0 188 63 4 0 0 0 0.0045875 1 43369 132.96 44.226 1 1.3057 1.4272 0 36144000 15516000 20628000 34722 907 13160 13520 54244 54244 TLLDSLR 7 0 1 Unmodified _TLLDSLR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 409.2425 2 409.242535 816.470518 98618 -0.17298 -7.079E-05 0.30659 0.00012547 0.13361 5.4678E-05 409.242437708036 414.246763347702 83.7 0.45364 83.7 83.548 84.002 0 123 35 5 0 0 0 0.057145 1 45691 51.787 7.0951 1 1.1608 0.99826 0 7697600 2993800 4703800 34723 907 13160 13520 54245 54245 TLLEEEYFR 9 0 1 Unmodified _TLLEEEYFR_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.3007 2 600.300778 1198.587 76574.94 0.78844 0.0004733 1.5867 0.00095251 2.3752 0.0014258 600.300714670497 605.807905794151 86.31 0.71835 86.31 86.032 86.751 -7.6294E-06 196 55 6 0 0 0 0.024384 1 51928 48.283 25.897 1 0.94557 0.97636 0 20060000 8962500 11097000 34724 1601 13161 13521 54246 54246 TLLEGEESR 9 0 1 Unmodified _TLLEGEESR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.2619 2 517.261653 1032.50875 NaN NaN NaN -0.32622 -0.00016874 NaN NaN NaN NaN 32.403 1.677 32.403 31.947 33.624 0 0 0 0 0.018019 1 15944 60.436 43.051 1 NaN NaN 0 831380000 831380000 0 + 34725 1308;1309 13162 13522 54247 54247 TLLEGEESR 9 0 1 Unmodified _TLLEGEESR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.2623 2 517.261653 1032.50875 NaN NaN NaN -0.47184 -0.00024407 NaN NaN NaN NaN 31.673 2.1445 31.673 31.366 33.511 0 0 0 0 0.0085799 1 15619 67.897 42.974 1 NaN NaN 0 1124500000 1124500000 0 + 34726 1308;1309 13162 13522 54248 54248 TLLEGEESR 9 0 1 Unmodified _TLLEGEESR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.2618 2 517.261653 1032.50875 NaN NaN NaN 0.051474 2.6626E-05 NaN NaN NaN NaN 36.266 2.3581 36.266 35.98 38.338 0 0 0 0 0.0034102 2 16155 78.516 59.734 1 NaN NaN 0 71999000 71999000 0 + 34727 1308;1309 13162 13522 54249;54250 54249 TLLEGEESR 9 0 1 Unmodified _TLLEGEESR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.262 2 517.261653 1032.50875 NaN NaN NaN -0.14106 -7.2966E-05 NaN NaN NaN NaN 36.447 2.8705 36.447 35.895 38.765 0 0 0 0 0.0067325 2 15674 71.692 54.306 1 NaN NaN 0 74870000 74870000 0 + 34728 1308;1309 13162 13522 54251;54252 54251 TLLEGSGLESIISIIHSSLAEPR 23 0 1 Unmodified _TLLEGSGLESIISIIHSSLAEPR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.4713 3 808.111111 2421.3115 66724.42 0.59527 0.00048104 0.29541 0.00023872 0.89068 0.00071977 808.445798380098 811.781686041531 133.57 0.13979 133.57 133.5 133.64 0 12 2 6 0 0 0 3.4349E-13 1 87545 83.245 79.35 1 1.6846 1.6898 0 17123000 6874300 10248000 34729 587 13163 13523 54253 54253 TLLEGSGLESIISIIHSSLAEPR 23 0 1 Unmodified _TLLEGSGLESIISIIHSSLAEPR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.4716 3 808.111111 2421.3115 67252.15 0.59807 0.0004833 0.48106 0.00038875 1.0791 0.00087205 808.445070160615 811.78161166197 133.57 0.21695 133.57 133.48 133.7 0 17 3 8 0 0 0 1.4147E-12 1 89766 75.112 75.112 1 1.9464 1.9513 0 17993000 6803200 11190000 34730 587 13163 13523 54254 54254 TLLENTAITIGR 12 0 1 Unmodified _TLLENTAITIGR_ 0 0 0 A0A024RAM0;Q92973;S4R398;B4DRY5;A0A024R7F7;Q4LE60 A0A024RAM0 A0A024RAM0 TNPO1;TNPO2;TNPO2 variant protein Transportin-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.3792 2 651.374809 1300.73507 75759.85 0.43281 0.00028192 -0.050218 -3.2711E-05 0.38259 0.00024921 651.374574171741 656.378923301959 103.18 0.61852 103.18 102.86 103.48 -7.6294E-06 120 41 4 0 0 0 0.0002022 2 57746 79.201 70.977 1 1.5314 1.3432 0 2522400 1027300 1495100 34731 309 13164 13524 54255;54256 54255 TLLFVR 6 0 1 Unmodified _TLLFVR_ 0 0 0 Q549N5;Q9Y5M8;C9J5Z8 Q549N5 Q549N5 SRPRB Signal recognition particle receptor subunit beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 374.7393 2 374.739431 747.46431 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.275 1 77.275 76.775 77.775 0 0 0 0 0.040766 1 46723 77.906 10.53 1 34732 1794 13165 13525 54257 54257 TLLLCGYPNVGK 12 1 0 Unmodified _TLLLCGYPNVGK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.8676 2 667.86048 1333.70641 72513.84 0.56459 0.00037707 0.32829 0.00021925 0.89287 0.00059632 667.860619419148 671.867624041451 103.05 0.89807 103.05 102.83 103.73 -7.6294E-06 283 57 8 0 0 0 0.00016364 2 58459 92.062 84.019 1 1.6136 1.318 0 33539000 13302000 20237000 34733 1183 13166 13526 54258;54259 54259 TLLLCGYPNVGK 12 1 0 Unmodified _TLLLCGYPNVGK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.867 2 667.86048 1333.70641 74005.33 0.38579 0.00025765 0.32841 0.00021933 0.7142 0.00047699 667.860629084161 671.867612698059 102.88 1.6467 102.88 102.61 104.26 0 377 110 9 0 0 0 0.00032618 2 57460 72.643 68.489 1 1.5396 1.272 0 31705000 12567000 19138000 34734 1183 13166 13526 54260;54261 54261 TLLPHDPTADVFVTPAEEK 19 1 0 Unmodified _TLLPHDPTADVFVTPAEEK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.3592 3 694.024755 2079.05244 72942.38 0.67639 0.00046943 -0.18468 -0.00012817 0.49172 0.00034126 694.358688751188 697.030307785938 97.213 1.4103 97.213 96.649 98.059 0 895 120 12 0 0 0 9.7511E-06 2 59095 39.385 39.385 1 0.97343 1.1375 0 279040000 139470000 139580000 34735 1934 13167 13527 54262;54263 54262 TLLPHDPTADVFVTPAEEK 19 1 0 Unmodified _TLLPHDPTADVFVTPAEEK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1041.0352 2 1040.53349 2079.05244 61364.51 0.45562 0.00047409 -0.4232 -0.00044035 0.032417 3.3731E-05 1041.03581844204 1045.04156544367 97.166 0.40961 97.166 97.014 97.424 0 90 37 6 0 0 0 3.9065E-05 1 59165 51.211 43.487 1 0.88242 0.9177 0 11513000 7428000 4084900 34736 1934 13167 13527 54264 54264 TLLPHDPTADVFVTPAEEK 19 1 0 Unmodified _TLLPHDPTADVFVTPAEEK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.6965 3 694.024755 2079.05244 72642.98 0.73159 0.00050774 -0.18459 -0.00012811 0.547 0.00037963 694.358969081027 696.69598388793 96.094 1.6096 96.094 95.695 97.304 0 924 134 11 0 0 0 1.1705E-05 3 60163 51.786 51.786 1 0.93271 1.0994 0 637320000 337010000 300300000 34737 1934 13167 13527 54265;54266;54267 54267 TLLPHDPTADVFVTPAEEK 19 1 0 Unmodified _TLLPHDPTADVFVTPAEEK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1045.0416 2 1040.53349 2079.05244 60707.51 0.44479 0.00046282 0.076534 7.9637E-05 0.52133 0.00054246 1041.03485344071 1044.54145564012 96.192 0.46513 96.192 96.041 96.506 0 115 41 5 0 0 0 0.0072641 1 59919 44.511 44.511 1 0.95849 0.98912 0 18317000 6276800 12041000 34738 1934 13167 13527 54268 54268 TLLPHDPTADVFVTPAEEK 19 1 0 Unmodified _TLLPHDPTADVFVTPAEEK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.0305 3 694.024755 2079.05244 72565.45 0.57422 0.00039852 -0.96265 -0.00066811 -0.38844 -0.00026958 694.357582648595 696.695681228191 109.45 1.1106 109.45 109.23 110.34 7.6294E-06 284 55 8 0 0 0 0.0030741 1 63018 26.237 26.237 1 1.3133 1.1159 0 61745000 25682000 36063000 34739 1934 13167 13527 54269 54269 TLLPHDPTADVFVTPAEEK 19 1 0 Unmodified _TLLPHDPTADVFVTPAEEK_ 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 697.0309 3 694.024755 2079.05244 NaN NaN NaN -0.70892 -0.00049201 NaN NaN NaN NaN 109.35 1.0902 109.35 109.08 110.17 7.6294E-06 0 0 0 1.1871E-07 1 61984 79.465 71.753 1 NaN NaN 0 35576000 0 35576000 34740 1934 13167 13527 54270 54270 TLLPHDPTADVFVTPAEEKPIEIQWVKPEPK 31 3 0 Unmodified _TLLPHDPTADVFVTPAEEKPIEIQWVKPEPK_ 0 0 2 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 882.2239 4 881.972345 3523.86027 62587.8 0.57868 0.00051038 -0.23499 -0.00020726 0.34369 0.00030313 882.473793824275 888.233540257202 120.71 0.6451 120.71 120.52 121.17 0 175 30 10 0 0 0 0.00046056 2 71737 26.849 26.849 1 1.4889 1.3944 0 29455000 10358000 19097000 34741 1934 13168 13528 54271;54272 54272 TLLPHDPTADVFVTPAEEKPIEIQWVKPEPK 31 3 0 Unmodified _TLLPHDPTADVFVTPAEEKPIEIQWVKPEPK_ 0 0 2 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 882.4742 4 881.972345 3523.86027 62803.58 0.45987 0.00040559 0.17546 0.00015475 0.63532 0.00056034 882.473829806867 888.23353918514 120.52 0.63229 120.52 120.22 120.85 0 265 33 11 0 0 0 0.015051 1 70663 20.559 20.559 1 1.2886 1.2745 0 27972000 10745000 17227000 34742 1934 13168 13528 54273 54273 TLLQGSGCLAGIYLEDTK 18 1 0 Unmodified _TLLQGSGCLAGIYLEDTK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 974.0029 2 969.995691 1937.97683 62954.25 0.53522 0.00051916 0.41677 0.00040427 0.95199 0.00092343 970.498281557403 974.002657718723 110.96 0.45267 110.96 110.67 111.12 0 88 28 5 0 0 0 9.7324E-08 3 69626 89.959 89.959 1 1.47 1.5031 0 14328000 5847300 8480200 34743 1754 13169 13529 54274;54275;54276 54274 TLLQGSGCLAGIYLEDTK 18 1 0 Unmodified _TLLQGSGCLAGIYLEDTK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 974.0023 2 969.995691 1937.97683 63936.54 0.39598 0.0003841 0.53677 0.00052066 0.93275 0.00090476 970.998480219794 974.002987100768 110.39 0.53989 110.39 110.11 110.65 0 120 37 5 0 0 0 8.3046E-08 1 70966 91.441 91.441 1 1.4151 1.4256 0 13427000 5565400 7862000 34744 1754 13169 13529 54277 54277 TLLQGSGCLAGIYLEDTK 18 1 0 Unmodified _TLLQGSGCLAGIYLEDTK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 969.9968 2 969.995691 1937.97683 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.31 1 110.31 109.81 110.81 -7.6294E-06 0 0 0 0.00019242 1 71001 65.043 45.303 1 34745 1754 13169 13529 54278 54278 TLLQVLGGTILESER 15 0 1 Unmodified _TLLQVLGGTILESER_ 0 0 0 Q5HYL4;Q86U38 Q5HYL4 Q5HYL4 DKFZp686E1893;NOP9 Nucleolar protein 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.9643 2 814.964519 1627.91449 68928.4 1.1046 0.0009002 -0.027473 -2.239E-05 1.0771 0.00087781 814.964356360064 819.968549244782 126.71 0.58932 126.71 126.46 127.05 0 189 39 6 0 0 0 3.5696E-10 2 82424 116.01 116.01 1 0.73435 0.75396 0 6462900 3702700 2760200 34746 1807 13170 13530 54279;54280 54280 TLLQVLGGTILESER 15 0 1 Unmodified _TLLQVLGGTILESER_ 0 0 0 Q5HYL4;Q86U38 Q5HYL4 Q5HYL4 DKFZp686E1893;NOP9 Nucleolar protein 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.9686 2 814.964519 1627.91449 69358.15 0.96588 0.00078716 0.18601 0.00015159 1.1519 0.00093875 814.964356216522 819.968960597974 126.24 0.57809 126.24 125.99 126.57 7.6294E-06 144 36 6 0 0 0 3.4445E-07 1 84132 105.65 105.65 1 0.76013 0.75906 0 9007100 4499200 4507900 34747 1807 13170 13530 54281 54281 TLLVADPR 8 0 1 Unmodified _TLLVADPR_ 0 0 0 P62249;M0R210;A0A087WZ27 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.7647 2 442.763635 883.512717 89606.79 0.047462 2.1015E-05 0.02861 1.2668E-05 0.076073 3.3682E-05 442.763720105312 447.76757142536 55.304 2.1732 55.304 54.144 56.317 0 646 190 6 0 0 0 0.012693 1 30559 67.032 25.53 1 1.0419 1.23 0 249430000 120510000 128920000 34748 1636 13171 13531 54282 54282 TLLVADPR 8 0 1 Unmodified _TLLVADPR_ 0 0 0 P62249;M0R210;A0A087WZ27 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.7632 2 442.763635 883.512717 90597.77 0.069068 3.0581E-05 -0.23411 -0.00010366 -0.16504 -7.3075E-05 442.763455869674 447.767587186715 54.167 2.427 54.167 53.152 55.579 0 852 210 6 0 0 0 0.012693 2 30723 67.032 25.53 1 1.0416 1.207 0 293920000 149060000 144860000 34749 1636 13171 13531 54283;54284 54283 TLLVADPR 8 0 1 Unmodified _TLLVADPR_ 0 0 0 P62249;M0R210;A0A087WZ27 P62249 P62249 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 442.7635 2 442.763635 883.512717 89507.93 -0.11039 -4.8875E-05 -0.18032 -7.984E-05 -0.29071 -0.00012871 442.763481521961 447.767472884811 63.157 2.3047 63.157 62.44 64.744 0 698 195 6 0 0 0 0.012693 1 31804 67.032 25.53 1 0.85561 0.70801 0 14822000 7853000 6969000 34750 1636 13171 13531 54285 54285 TLLYNPFPPTNESDVIR 17 0 1 Unmodified _TLLYNPFPPTNESDVIR_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 989.0121 2 988.509822 1975.00509 60956.46 0.55318 0.00054682 0.068151 6.7368E-05 0.62133 0.00061419 989.011358866951 994.015538579981 113.63 0.76873 113.63 113.3 114.07 7.6294E-06 392 56 10 0 0 0 3.9131E-05 3 71816 79.886 79.886 1 0.95757 1.0607 0 63381000 32807000 30574000 34751 1955 13172 13532 54286;54287;54288 54288 TLLYNPFPPTNESDVIR 17 0 1 Unmodified _TLLYNPFPPTNESDVIR_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 994.0153 2 988.509822 1975.00509 61154.22 0.46733 0.00046196 0.023676 2.3404E-05 0.491 0.00048536 989.011281839259 994.0154388308 113.06 0.85516 113.06 112.74 113.59 -7.6294E-06 376 58 9 0 0 0 6.9444E-07 2 73122 93.766 93.766 1 0.95839 1.0985 0 82776000 40882000 41893000 34752 1955 13172 13532 54289;54290 54289 TLLYNPFPPTNESDVIR 17 0 1 Unmodified _TLLYNPFPPTNESDVIR_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 993.5148 2 988.509822 1975.00509 61089.46 0.39529 0.00039075 0.54484 0.00053858 0.94014 0.00092933 989.01172525646 993.514447845746 124.79 1.1949 124.79 124.39 125.58 -7.6294E-06 367 50 12 0 0 0 7.4282E-05 2 74678 66.498 66.498 1 1.228 1.0558 0 45465000 21477000 23987000 34753 1955 13172 13532 54291;54292 54292 TLLYNPFPPTNESDVIR 17 0 1 Unmodified _TLLYNPFPPTNESDVIR_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 994.017 2 988.509822 1975.00509 61093.05 0.36405 0.00035986 0.36448 0.00036029 0.72853 0.00072015 989.011508606395 993.514336636109 124.66 1.2408 124.66 124.28 125.52 7.6294E-06 377 55 10 0 0 0 0.0038294 1 73644 35.737 35.737 1 1.2155 1.0602 0 40699000 18507000 22192000 34754 1955 13172 13532 54293 54293 TLMNTIMQLR 10 0 1 2 Oxidation (M) _TLM(ox)NTIM(ox)QLR_ TLM(1)NTIM(1)QLR TLM(55.55)NTIM(55.55)QLR 0 2 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.8284 2 626.82304 1251.63153 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.054 1 60.054 59.554 60.554 0 0 0 0 0.012327 1 35009 55.549 36.278 1 34755 695;1595 13173 13533 54294 54294 539;540 TLNDMRQEYEQLIAK 15 1 1 Oxidation (M) _TLNDM(ox)RQEYEQLIAK_ TLNDM(1)RQEYEQLIAK TLNDM(49.62)RQEYEQLIAK 0 1 1 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.6458 3 623.312131 1866.91456 NaN NaN NaN -0.60199 -0.00037523 NaN NaN NaN NaN 66.497 0.88303 66.497 65.969 66.852 0 0 0 0 0.0053259 1 39133 49.62 39.424 1 NaN NaN 0 36049000 36049000 0 + 34756 1165 13174 13534 54295 54295 884 TLNDMRQEYEQLIAK 15 1 1 Oxidation (M) _TLNDM(ox)RQEYEQLIAK_ TLNDM(1)RQEYEQLIAK TLNDM(65.37)RQEYEQLIAK 0 1 1 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 623.6464 3 623.312131 1866.91456 NaN NaN NaN -0.30273 -0.00018869 NaN NaN NaN NaN 77.761 0.82625 77.761 77.514 78.34 0 0 0 0 0.00072217 1 41665 65.374 60.983 1 NaN NaN 0 8514200 8514200 0 + 34757 1165 13174 13534 54296 54296 884 TLNEWSSQINPDLVR 15 0 1 Unmodified _TLNEWSSQINPDLVR_ 0 0 0 D3DT44;P48507 D3DT44 D3DT44 GCLM Glutamate--cysteine ligase regulatory subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 891.4577 2 886.452308 1770.89006 NaN NaN NaN -0.4139 -0.0003669 NaN NaN NaN NaN 99.753 0.50879 99.753 99.45 99.959 7.6294E-06 0 0 0 1.0076E-06 1 61035 93.623 79.717 1 NaN NaN 0 3856500 0 3856500 34758 1188 13175 13535 54297 54297 TLNEWSSQINPDLVR 15 0 1 Unmodified _TLNEWSSQINPDLVR_ 0 0 0 D3DT44;P48507 D3DT44 D3DT44 GCLM Glutamate--cysteine ligase regulatory subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 891.4581 2 886.452308 1770.89006 NaN NaN NaN -0.054401 -4.8224E-05 NaN NaN NaN NaN 99.054 0.31183 99.054 98.839 99.15 0 0 0 0 0.0024206 1 61997 63.091 49.428 1 NaN NaN 0 5572500 0 5572500 34759 1188 13175 13535 54298 54298 TLPADYGDSLAKR 13 1 1 Unmodified _TLPADYGDSLAKR_ 0 0 1 A8KAN5;A0A024R2L0;Q9NZI7 A8KAN5 A8KAN5 UBP1 Upstream-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.5883 3 469.580658 1405.72014 87294.22 0.40221 0.00018887 -0.27529 -0.00012927 0.12692 5.9601E-05 469.580599361463 475.587937186056 54.289 0.87968 54.289 53.932 54.812 -3.8147E-06 420 75 10 0 0 0 0.042344 1 30380 13.404 1.9215 1 0.67778 0.82578 0 632370000 388310000 244050000 34760 115 13176 13536 54299 54299 TLPAHSDPVSAVHFNR 16 0 1 Unmodified _TLPAHSDPVSAVHFNR_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.6352 3 583.300665 1746.88017 80228.53 0.42301 0.00024674 0.34297 0.00020005 0.76598 0.00044679 583.30108352872 586.971381720443 62.066 0.58787 62.066 61.769 62.357 0 226 48 6 0 0 0 0.002889 2 31836 33.947 33.947 1 1.3785 1.1603 0 4540900 1635100 2905900 34761 1630 13177 13537 54300;54301 54300 TLPGSDWTPNAQFITR 16 0 1 Unmodified _TLPGSDWTPNAQFITR_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.4584 2 902.45485 1802.89515 NaN NaN NaN -0.055965 -5.0506E-05 NaN NaN NaN NaN 104.27 0.64548 104.27 103.98 104.62 0 0 0 0 0.037524 1 64335 37.426 20.794 1 NaN NaN 0 5996100 0 5996100 34762 732 13178 13538 54302 54302 TLPGSDWTPNAQFITR 16 0 1 Unmodified _TLPGSDWTPNAQFITR_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 907.4559 2 902.45485 1802.89515 NaN NaN NaN -0.072998 -6.5877E-05 NaN NaN NaN NaN 103.57 0.57344 103.57 103.35 103.93 7.6294E-06 0 0 0 0.013231 1 65492 44.511 27.879 1 NaN NaN 0 7831600 0 7831600 34763 732 13178 13538 54303 54303 TLPLFYGSIVR 11 0 1 Unmodified _TLPLFYGSIVR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.3707 2 633.366256 1264.71796 78257.91 0.46945 0.00029733 0.094906 6.011E-05 0.56435 0.00035744 633.366227582016 638.370536980659 114.44 0.73882 114.44 114.11 114.85 0 195 51 5 0 0 0 0.0068404 2 72674 53.683 42.047 1 0.96811 1.0177 0 11270000 5621500 5648200 34764 684 13179 13539 54304;54305 54305 TLPLFYGSIVR 11 0 1 Unmodified _TLPLFYGSIVR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3661 2 633.366256 1264.71796 79228.33 0.46558 0.00029488 0.088845 5.6272E-05 0.55443 0.00035116 633.366071242563 638.37064891403 113.72 0.73799 113.72 113.46 114.19 0 192 53 5 0 0 0 0.019396 1 73815 44.309 14.836 1 0.97185 0.98234 0 9818900 4060400 5758500 34765 684 13179 13539 54306 54306 TLPLFYGSIVR 11 0 1 Unmodified _TLPLFYGSIVR_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.8687 2 633.366256 1264.71796 78673.09 0.81706 0.0005175 0.24009 0.00015207 1.0571 0.00066956 633.366348890075 638.370752661707 125.7 1.285 125.7 125.35 126.63 7.6294E-06 146 50 6 0 0 0 0.060689 1 75512 33.229 15.761 1 1.2487 1.0828 0 2076200 929460 1146700 34766 684 13179 13539 54307 54307 TLQDIVYK 8 1 0 Unmodified _TLQDIVYK_ 0 0 0 Q5T8Z4;R4GMX3;P35226;Q5T8Z6;A0A087X259;J3KT13;Q6IB93;Q5U0M5;A0A024R1V6;P35227 Q5T8Z4 Q5T8Z4 BMI1;COMMD3-BMI1;PCGF2;COMMD3 Polycomb complex protein BMI-1;Polycomb group RING finger protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.2757 2 490.276575 978.538597 NaN NaN NaN -0.37148 -0.00018213 NaN NaN NaN NaN 59.725 0.389 59.725 59.529 59.918 0 0 0 0 0.020224 1 33994 65.252 6.271 1 NaN NaN 0 3731200 3731200 0 34767 1540 13180 13540 54308 54308 TLQDIVYK 8 1 0 Unmodified _TLQDIVYK_ 0 0 0 Q5T8Z4;R4GMX3;P35226;Q5T8Z6;A0A087X259;J3KT13;Q6IB93;Q5U0M5;A0A024R1V6;P35227 Q5T8Z4 Q5T8Z4 BMI1;COMMD3-BMI1;PCGF2;COMMD3 Polycomb complex protein BMI-1;Polycomb group RING finger protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.2839 2 490.276575 978.538597 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.79 1 59.79 59.29 60.29 -3.8147E-06 0 0 0 0.025116 1 34097 65.252 15.662 1 34768 1540 13180 13540 54309 54309 TLQDIVYK 8 1 0 Unmodified _TLQDIVYK_ 0 0 0 Q5T8Z4;R4GMX3;P35226;Q5T8Z6;A0A087X259;J3KT13;Q6IB93;Q5U0M5;A0A024R1V6;P35227 Q5T8Z4 Q5T8Z4 BMI1;COMMD3-BMI1;PCGF2;COMMD3 Polycomb complex protein BMI-1;Polycomb group RING finger protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.2829 2 490.276575 978.538597 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.913 1 59.913 59.413 60.413 0 0 0 0 0.041785 1 34180 57.281 10.214 1 34769 1540 13180 13540 54310 54310 TLQDIVYK 8 1 0 Unmodified _TLQDIVYK_ 0 0 0 Q5T8Z4;R4GMX3;P35226;Q5T8Z6;A0A087X259;J3KT13;Q6IB93;Q5U0M5;A0A024R1V6;P35227 Q5T8Z4 Q5T8Z4 BMI1;COMMD3-BMI1;PCGF2;COMMD3 Polycomb complex protein BMI-1;Polycomb group RING finger protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2761 2 490.276575 978.538597 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.54 1 58.54 58.04 59.04 -3.8147E-06 0 0 0 0.025562 1 34052 65.038 9.0271 1 34770 1540 13180 13540 54311 54311 TLQEQLEK 8 1 0 Unmodified _TLQEQLEK_ 0 0 0 Q9H307;A8K964;G3V5F0;G3V579 Q9H307 Q9H307 PNN Pinin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.776 2 494.769114 987.523675 NaN NaN NaN -0.25141 -0.00012439 NaN NaN NaN NaN 30.838 0.67255 30.838 30.73 31.402 0 0 0 0 0.025358 1 15152 62.107 10.677 1 NaN NaN 0 6842600 0 6842600 34771 2028 13181 13541 54312 54312 TLQEQLENGPNTQLAR 16 0 1 Unmodified _TLQEQLENGPNTQLAR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 911.4353 2 906.465946 1810.91734 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.748 1 69.748 69.248 70.248 7.6294E-06 0 0 0 0.0041801 1 40559 53.034 30.155 1 34772 471 13182 13542 54313 54313 TLQEQLENGPNTQLAR 16 0 1 Unmodified _TLQEQLENGPNTQLAR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 906.467 2 906.465946 1810.91734 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.769 1 69.769 69.269 70.269 0 0 0 0 0.0001418 1 40572 83.204 60.086 1 34773 471 13182 13542 54314 54314 TLQEQLENGPNTQLAR 16 0 1 Unmodified _TLQEQLENGPNTQLAR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 906.4666 2 906.465946 1810.91734 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.644 1 68.644 68.144 69.144 0 0 0 0 0.00075139 1 40808 58.04 47.715 1 34774 471 13182 13542 54315 54315 TLQEQLENGPNTQLAR 16 0 1 Unmodified _TLQEQLENGPNTQLAR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 906.4119 2 906.465946 1810.91734 66352.37 0.48512 0.00043974 0.097661 8.8526E-05 0.58278 0.00052827 906.465864804456 911.971555452783 68.732 0.33059 68.732 68.603 68.933 0 71 29 4 0 0 0 0.003355 1 40945 76.357 76.357 1 0.65862 0.64927 0 13038000 6224300 6813700 34775 471 13182 13542 54316 54316 TLQEQLENGPNTQLAR 16 0 1 Unmodified _TLQEQLENGPNTQLAR_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C4;A0A087WVV2;A1A5C5 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 911.4702 2 906.465946 1810.91734 66085.84 0.27237 0.00024689 -0.025561 -2.317E-05 0.24681 0.00022372 906.466003529126 911.470359242726 80.169 0.45807 80.169 79.87 80.328 0 93 27 6 0 0 0 0.015368 1 43273 30.998 30.998 1 0.6888 0.59779 0 2158000 976580 1181400 34776 471 13182 13542 54317 54317 TLQEVTQLSQEAQR 14 0 1 Unmodified _TLQEVTQLSQEAQR_ 0 0 0 E9KL44;P40939;B4DRH6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.9285 2 815.923383 1629.83221 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.563 1 69.563 69.063 70.063 7.6294E-06 0 0 0 0.00039213 1 40424 84.718 65.972 1 34777 1228 13183 13543 54318 54318 TLQEVTQLSQEAQR 14 0 1 Unmodified _TLQEVTQLSQEAQR_ 0 0 0 E9KL44;P40939;B4DRH6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.9243 2 815.923383 1629.83221 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.798 1 69.798 69.298 70.298 0 0 0 0 4.5669E-17 1 40589 130.44 97.396 1 34778 1228 13183 13543 54319 54319 TLQEVTQLSQEAQR 14 0 1 Unmodified _TLQEVTQLSQEAQR_ 0 0 0 E9KL44;P40939;B4DRH6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.9277 2 815.923383 1629.83221 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.348 1 70.348 69.848 70.848 0 0 0 0 0.00097562 1 40928 77.597 6.6554 1 34779 1228 13183 13543 54320 54320 TLQEVTQLSQEAQR 14 0 1 Unmodified _TLQEVTQLSQEAQR_ 0 0 0 E9KL44;P40939;B4DRH6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.923 2 815.923383 1629.83221 68878.54 0.58787 0.00047966 -0.071755 -5.8546E-05 0.51611 0.00042111 815.923694947495 821.427838145529 68.857 0.56572 68.857 68.444 69.01 0 115 49 5 0 0 0 8.1988E-10 2 40965 122.33 91.933 1 0.79243 0.77862 0 13593000 9153100 4439600 34780 1228 13183 13543 54321;54322 54322 TLQEVTQLSQEAQR 14 0 1 Unmodified _TLQEVTQLSQEAQR_ 0 0 0 E9KL44;P40939;B4DRH6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.9274 2 815.923383 1629.83221 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.525 1 69.525 69.025 70.025 0 0 0 0 0.005569 1 41412 55.261 39.008 1 34781 1228 13183 13543 54323 54323 TLQEVTQLSQEAQR 14 0 1 Unmodified _TLQEVTQLSQEAQR_ 0 0 0 E9KL44;P40939;B4DRH6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 821.4299 2 815.923383 1629.83221 67969.27 0.52804 0.00043084 0.26563 0.00021673 0.79367 0.00064757 815.924529720216 820.927393025298 80.462 1.3813 80.462 79.996 81.378 0 253 92 6 0 0 0 0.031992 1 43275 30.563 24.84 1 1.6447 1.4051 0 5773300 2555300 3218000 34782 1228 13183 13543 54324 54324 TLQEVTQLSQEAQR 14 0 1 Unmodified _TLQEVTQLSQEAQR_ 0 0 0 E9KL44;P40939;B4DRH6 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 815.9258 2 815.923383 1629.83221 NaN NaN NaN 0.80685 0.00065833 NaN NaN NaN NaN 80.986 0.69048 80.986 80.843 81.534 0 0 0 0 0.03867 1 43003 40.373 26.71 1 NaN NaN 0 1651600 1651600 0 34783 1228 13183 13543 54325 54325 TLQGHSVIR 9 0 1 Unmodified _TLQGHSVIR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.7907 2 505.790715 1009.56688 86640.79 -0.082154 -4.1553E-05 0.1018 5.1488E-05 0.019643 9.9353E-06 505.790769552497 510.794739226591 21.841 0.43725 21.841 21.704 22.141 0 85 25 5 0 0 0 0.0040455 1 8059 70.256 34.376 1 0.72641 0.74067 0 18681000 10381000 8299400 34784 591 13184 13544 54326 54326 TLQGHSVIR 9 0 1 Unmodified _TLQGHSVIR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.7949 2 505.790715 1009.56688 86484.75 0.085406 4.3198E-05 -0.6989 -0.0003535 -0.6135 -0.0003103 505.790619425267 510.794723546295 21.506 0.41852 21.506 21.382 21.801 0 77 20 7 0 0 0 0.0049382 2 7664 67.993 40.855 1 0.63594 0.6369 0 18738000 9890900 8846800 34785 591 13184 13544 54327;54328 54328 TLQGHSVIR 9 0 1 Unmodified _TLQGHSVIR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 337.5298 3 337.529569 1009.56688 NaN NaN NaN 0.22727 7.6709E-05 NaN NaN NaN NaN 21.511 0.50748 21.511 21.382 21.89 0 0 0 0 0.017689 1 7620 44.203 28.541 1 NaN NaN 0 8996900 8996900 0 34786 591 13184 13544 54329 54329 TLQLDEDVLCVSYSPNQK 18 1 0 Unmodified _TLQLDEDVLCVSYSPNQK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1059.5232 2 1055.01207 2108.00958 NaN NaN NaN -0.28289 -0.00029845 NaN NaN NaN NaN 107.31 0.31401 107.31 107.05 107.37 0 0 0 0 0.00028725 3 66787 62.891 53.841 1 NaN NaN 0 8012800 0 8012800 34787 1827 13185 13545 54330;54331;54332 54332 TLQLDEDVLCVSYSPNQK 18 1 0 Unmodified _TLQLDEDVLCVSYSPNQK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1059.0203 2 1055.01207 2108.00958 58380.3 0.38797 0.00040931 1.0449 0.0011024 1.4329 0.0015117 1055.0127941372 1059.52213480722 118.57 0.61845 118.57 118.36 118.97 0 134 30 7 0 0 0 3.4723E-05 2 70174 63.29 60.423 1 1.0314 0.83298 0 22770000 9825200 12945000 34788 1827 13185 13545 54333;54334 54334 TLQLDEDVLCVSYSPNQK 18 1 0 Unmodified _TLQLDEDVLCVSYSPNQK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1059.5229 2 1055.01207 2108.00958 58749.5 0.35944 0.00037921 1.1187 0.0011803 1.4782 0.0015595 1055.51419405349 1059.02134331516 118.47 0.54397 118.47 118.23 118.77 0 145 27 8 0 0 0 1.4883E-11 3 69092 101.36 96.18 1 1.0716 0.87899 0 12409000 5774600 6634800 34789 1827 13185 13545 54335;54336;54337 54337 TLQLDNNFEVK 11 1 0 Unmodified _TLQLDNNFEVK_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 660.844 2 660.843342 1319.67213 73590.98 0.81009 0.00053535 0.02122 1.4023E-05 0.83131 0.00054937 660.843583425013 664.850411171379 79.438 1.1056 79.438 78.846 79.951 0 429 93 8 0 0 0 9.881E-23 3 48194 163.94 142.48 1 1.3628 1.5321 0 72863000 30822000 42041000 34790 2114 13186 13546 54338;54339;54340 54340 TLQLDNNFEVK 11 1 0 Unmodified _TLQLDNNFEVK_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.851 2 660.843342 1319.67213 73837.31 0.62482 0.00041291 -0.064637 -4.2715E-05 0.56018 0.00037019 660.843455501954 664.850584289375 92.118 0.64911 92.118 91.819 92.468 7.6294E-06 194 36 7 0 0 0 0.00047605 1 51179 75.509 68.578 1 1.1505 0.92111 0 8597500 4009300 4588200 34791 2114 13186 13546 54341 54341 TLQLDNNFEVK 11 1 0 Unmodified _TLQLDNNFEVK_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.8505 2 660.843342 1319.67213 74245.09 0.44566 0.00029451 -0.17752 -0.00011731 0.26814 0.0001772 660.843610586131 664.850646157844 92.018 0.85905 92.018 91.708 92.567 0 260 45 8 0 0 0 0.00034479 2 50284 85.807 76.011 1 1.1937 0.97619 0 8319700 3976900 4342800 34792 2114 13186 13546 54342;54343 54343 TLQQQTFK 8 1 0 Unmodified _TLQQQTFK_ 0 0 0 P54727;B4DEA3;Q53F10;Q5W0S5;K7ENJ0;K7ELW1;A8K1J3;A0A024R7G8;P54725 P54727 P54727 RAD23B;RAD23A UV excision repair protein RAD23 homolog B;UV excision repair protein RAD23 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.2715 2 497.271824 992.529095 88665.85 0.089979 4.4744E-05 -0.64015 -0.00031833 -0.55017 -0.00027358 497.271433692462 501.278606645833 29.52 0.92216 29.52 29.13 30.052 0 265 65 6 0 0 0 0.0075008 2 11991 82.671 63.035 1 0.92396 0.7322 0 4819200 2467300 2351900 34793 1610 13187 13547 54344;54345 54345 TLQQQTFK 8 1 0 Unmodified _TLQQQTFK_ 0 0 0 P54727;B4DEA3;Q53F10;Q5W0S5;K7ENJ0;K7ELW1;A8K1J3;A0A024R7G8;P54725 P54727 P54727 RAD23B;RAD23A UV excision repair protein RAD23 homolog B;UV excision repair protein RAD23 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.2724 2 497.271824 992.529095 87579.98 -0.23259 -0.00011566 -0.58619 -0.00029149 -0.81877 -0.00040715 497.271430589021 501.278729431909 29.683 0.97486 29.683 29.383 30.358 0 197 61 5 0 0 0 0.026974 2 11556 54.205 47.852 1 0.86746 0.70859 0 4727700 2308700 2418900 34794 1610 13187 13547 54346;54347 54346 TLQTISLLGYMK 12 1 0 Oxidation (M) _TLQTISLLGYM(ox)K_ TLQTISLLGYM(1)K TLQTISLLGYM(113.93)K 0 1 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.3895 2 692.381245 1382.74794 74088.2 0.64667 0.00044774 -0.19694 -0.00013636 0.44973 0.00031138 692.381314614998 696.388221473753 99.013 1.1007 99.013 98.577 99.678 0 398 89 6 0 0 0 2.4682E-08 2 60556 113.93 113.93 1 4.7274 5.1025 0 41944000 8509900 33434000 34795 1391 13188 13548 54348;54349 54349 1068 TLQTISLLGYMK 12 1 0 Oxidation (M) _TLQTISLLGYM(ox)K_ TLQTISLLGYM(1)K TLQTISLLGYM(90.11)K 0 1 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.3889 2 692.381245 1382.74794 74606.13 0.81377 0.00056344 -0.047371 -3.2799E-05 0.7664 0.00053064 692.381311083447 696.388176061533 98.219 1.1442 98.219 97.802 98.946 7.6294E-06 365 97 5 0 0 0 9.5442E-05 1 61310 90.108 90.108 1 4.5879 5.1331 0 84827000 16037000 68791000 34796 1391 13188 13548 54350 54350 1068 TLQTISLLGYMK 12 1 0 Oxidation (M) _TLQTISLLGYM(ox)K_ TLQTISLLGYM(1)K TLQTISLLGYM(73.84)K 0 1 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.389 2 692.381245 1382.74794 76072.45 0.74652 0.00051688 0.0058942 4.081E-06 0.75242 0.00052096 692.381064004636 696.388498894475 111.78 0.89478 111.78 111.52 112.42 0 177 52 5 0 0 0 0.00011885 1 64758 73.841 73.841 1 4.5798 3.6295 0 6357900 1322400 5035500 34797 1391 13188 13548 54351 54351 1068 TLQTISLLGYMK 12 1 0 Oxidation (M) _TLQTISLLGYM(ox)K_ TLQTISLLGYM(1)K TLQTISLLGYM(60.17)K 0 1 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 696.389 2 692.381245 1382.74794 NaN NaN NaN 0.36975 0.00025601 NaN NaN NaN NaN 126.29 0.90399 126.29 126.06 126.96 -7.6294E-06 0 0 0 0.0020337 1 75990 60.167 41.073 1 NaN NaN 0 970900 0 970900 34798 1391 13188 13548 54352 54352 1068 TLQTISLLGYMK 12 1 0 Oxidation (M) _TLQTISLLGYM(ox)K_ TLQTISLLGYM(1)K TLQTISLLGYM(74.84)K 0 1 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 696.3881 2 692.381245 1382.74794 76051.95 0.55693 0.00038561 0.069812 4.8336E-05 0.62674 0.00043394 692.381354654244 696.388303769733 111.62 0.84435 111.62 111.33 112.17 7.6294E-06 155 46 5 0 0 0 8.7558E-05 1 63699 74.841 74.841 1 3.3552 2.7369 0 5942400 1823600 4118800 34799 1391 13188 13548 54353 54353 1068 TLQTISLLGYMK 12 1 0 Unmodified _TLQTISLLGYMK_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.3913 2 684.383788 1366.75302 NaN NaN NaN 0.046041 3.151E-05 NaN NaN NaN NaN 126.11 1.0184 126.11 125.8 126.82 0 0 0 0 0.00077045 1 74801 85.377 37.554 1 NaN NaN 0 5209100 0 5209100 34800 1391 13188 13549 54354 54354 TLSADASVNTLPVVVSR 17 0 1 Unmodified _TLSADASVNTLPVVVSR_ 0 0 0 Q92615;H0Y641;H0Y4V9 Q92615 Q92615 LARP4B La-related protein 4B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.9838 2 864.978158 1727.94176 NaN NaN NaN -0.22046 -0.00019069 NaN NaN NaN NaN 99.039 0.48679 99.039 98.79 99.277 0 0 0 0 3.9354E-09 1 60563 98.942 84.523 1 NaN NaN 0 5327400 0 5327400 34801 1949 13189 13550 54355 54355 TLSDDLDEAAK 11 1 0 Unmodified _TLSDDLDEAAK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 589.2827 2 589.282783 1176.55101 79221.53 0.67341 0.00039683 -0.03329 -1.9617E-05 0.64012 0.00037721 589.282741904655 593.289862458313 51.205 1.4462 51.205 50.741 52.187 -3.8147E-06 633 127 8 0 0 0 0.00042951 3 28548 79.16 65.706 1 0.94028 1.1061 0 317030000 161830000 155200000 34802 2023 13190 13551 54356;54357;54358 54357 TLSDDLDEAAK 11 1 0 Unmodified _TLSDDLDEAAK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 589.2829 2 589.282783 1176.55101 79004.39 0.71391 0.0004207 -0.18556 -0.00010935 0.52835 0.00031135 589.282671917121 593.289769920695 50.083 1.1983 50.083 49.64 50.839 0 547 105 7 0 0 0 0.00013719 4 28091 95.523 78.806 1 0.94052 1.1 0 293580000 147700000 145880000 34803 2023 13190 13551 54359;54360;54361;54362 54360 TLSDDLDEAAK 11 1 0 Unmodified _TLSDDLDEAAK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 593.2901 2 589.282783 1176.55101 79110.01 0.38356 0.00022603 -0.19702 -0.0001161 0.18655 0.00010993 589.282704104633 593.289750604659 59.19 1.5264 59.19 58.703 60.23 0 638 113 10 0 0 0 0.003118 3 30381 60.398 50.617 1 1.4616 1.2479 0 65610000 27047000 38563000 34804 2023 13190 13551 54363;54364;54365 54364 TLSDDLDEAAK 11 1 0 Unmodified _TLSDDLDEAAK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.2902 2 589.282783 1176.55101 79625.17 0.45863 0.00027026 -0.23076 -0.00013598 0.22787 0.00013428 589.282718843431 593.289722575573 59.833 1.3233 59.833 59.35 60.673 0 589 99 10 0 0 0 0.01353 1 29695 47.302 40.997 1 1.4014 1.1911 0 76216000 31657000 44559000 34805 2023 13190 13551 54366 54366 TLSDYNIQK 9 1 0 Unmodified _TLSDYNIQK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.2798 2 541.279846 1080.54514 81301.89 0.73989 0.00040049 -0.66299 -0.00035887 0.076897 4.1623E-05 541.28019498928 545.286459585016 39.164 2.7214 39.164 38.78 41.501 0 1095 228 12 0 0 0 0.00030876 4 20070 119.41 86.797 1 0.88198 1.0813 0 4184200000 2181500000 2002700000 34806 891 13191 13552 54367;54368;54369;54370 54368 TLSDYNIQK 9 1 0 Unmodified _TLSDYNIQK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.2807 2 541.279846 1080.54514 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.439 1 40.439 39.939 40.939 0 0 0 0 0.023644 1 21153 64.265 22.156 1 34807 891 13191 13552 54371 54371 TLSDYNIQK 9 1 0 Unmodified _TLSDYNIQK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.287 2 541.279846 1080.54514 81461.06 0.40828 0.00022099 -0.28497 -0.00015425 0.12331 6.6743E-05 541.280326562456 545.286637798608 38.235 1.6479 38.235 37.871 39.519 -3.8147E-06 782 139 10 0 0 0 2.503E-05 4 20399 113.91 81.013 1 0.83574 0.99184 0 4900400000 2522900000 2377500000 34808 891 13191 13552 54372;54373;54374;54375 54375 TLSDYNIQK 9 1 0 Unmodified _TLSDYNIQK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1083.5573 1 1081.55242 1080.54514 58670.88 0.047158 5.1004E-05 0.051252 5.5432E-05 0.09841 0.00010644 1081.55236865957 1089.56658394478 38.267 0.20507 38.267 38.191 38.396 0 108 17 7 0 0 0 0.0014597 1 20044 113.5 71.612 1 0.81773 0.9618 0 371730000 203300000 168430000 34809 891 13191 13552 54376 54376 TLSDYNIQK 9 1 0 Unmodified _TLSDYNIQK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.2871 2 541.279846 1080.54514 81082.55 0.58135 0.00031467 -0.49593 -0.00026844 0.085417 4.6235E-05 541.280000004642 545.28657470389 44.907 2.5711 44.907 44.548 47.119 0 989 190 10 0 0 0 0.03016 2 21714 49.442 40.047 1 1.1178 0.98656 0 274260000 128310000 145950000 34810 891 13191 13552 54377;54378 54377 TLSDYNIQK 9 1 0 Unmodified _TLSDYNIQK_ 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q96C32;Q96MH4;L8B4I8;L8B196;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;Q8WYN9;Q9UFQ0;Q96H31;Q66K58;Q59EM9;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;UbC;DKFZp434K0435 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.287 2 541.279846 1080.54514 81004.3 0.82463 0.00044635 -0.73356 -0.00039706 0.091069 4.9294E-05 541.279834529898 545.286467865386 45.079 3.1235 45.079 44.664 47.787 0 1017 217 11 0 0 0 0.0016813 3 21283 82.241 59.198 1 1.1128 0.96286 0 238160000 111390000 126770000 34811 891 13191 13552 54379;54380;54381 54381 TLSFSSDNIAVLSAAADSIK 20 1 0 Unmodified _TLSFSSDNIAVLSAAADSIK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1009.5328 2 1005.52313 2009.0317 60994.32 0.46482 0.00046738 0.075614 7.6031E-05 0.54043 0.00054341 1006.02467274394 1009.53031113817 122.48 0.88063 122.48 122.18 123.06 0 373 63 9 0 0 0 1.2735E-12 3 79534 100.54 100.54 1 0.93928 1.0359 0 56122000 29639000 26483000 34812 1827 13192 13553 54382;54383;54384 54384 TLSFSSDNIAVLSAAADSIK 20 1 0 Unmodified _TLSFSSDNIAVLSAAADSIK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1009.5302 2 1005.52313 2009.0317 61106.39 0.61958 0.000623 0.054729 5.5031E-05 0.67431 0.00067804 1006.02461436223 1009.53045187391 122 0.9277 122 121.7 122.62 0 375 68 9 0 0 0 5.3245E-13 3 80703 107.61 107.61 1 0.9242 1.0416 0 60369000 31325000 29043000 34813 1827 13192 13553 54385;54386;54387 54387 TLSFSSDNIAVLSAAADSIK 20 1 0 Unmodified _TLSFSSDNIAVLSAAADSIK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1009.5316 2 1005.52313 2009.0317 60939.13 0.62179 0.00062523 -0.21374 -0.00021492 0.40806 0.00041031 1005.52432313655 1009.52917035553 134.52 0.40211 134.52 134.35 134.75 0 84 13 10 0 0 0 1.3541E-31 2 82083 148.57 148.57 1 2.0383 1.7499 0 82255000 29956000 52299000 34814 1827 13192 13553 54388;54389 54388 TLSFSSDNIAVLSAAADSIK 20 1 0 Unmodified _TLSFSSDNIAVLSAAADSIK_ 0 0 0 Q5TDG3;Q9UNX4;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1005.5243 2 1005.52313 2009.0317 60780.84 0.35451 0.00035646 -0.41493 -0.00041722 -0.060421 -6.0755E-05 1005.5238001227 1009.52922070467 134.4 0.3869 134.4 134.28 134.66 0 91 13 11 0 0 0 6.5361E-24 2 81136 135.72 135.72 1 1.6877 1.4433 0 112790000 48365000 64425000 34815 1827 13192 13553 54390;54391 54391 TLSLALDNPNEEVAEVK 17 1 0 Unmodified _TLSLALDNPNEEVAEVK_ 0 0 0 Q8IZT6;B3KWI2;Q4G1H2;Q4G1H0;A0A087WV76 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.4454 2 921.478188 1840.94182 67572.52 0.7848 0.00072317 -0.034728 -3.2001E-05 0.75007 0.00069117 921.478008650785 925.485532020651 98.135 0.5509 98.135 97.85 98.401 0 127 43 5 0 0 0 6.7636E-05 4 60014 89.013 89.013 1 1.1169 1.1587 0 17023000 8327400 8696100 34816 1902 13193 13554 54392;54393;54394;54395 54394 TLSLALDNPNEEVAEVK 17 1 0 Unmodified _TLSLALDNPNEEVAEVK_ 0 0 0 Q8IZT6;B3KWI2;Q4G1H2;Q4G1H0;A0A087WV76 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.4864 2 921.478188 1840.94182 68089.98 0.74717 0.0006885 -0.58027 -0.0005347 0.16691 0.0001538 921.476628448465 925.485147257009 97.461 0.5506 97.461 97.16 97.711 0 130 42 5 0 0 0 0.0014213 1 60768 53.252 53.252 1 1.0633 1.0818 0 16888000 8181800 8706600 34817 1902 13193 13554 54396 54396 TLSQGESQTSEHELFLDTK 19 1 0 Unmodified _TLSQGESQTSEHELFLDTK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3317 3 717.346446 2149.01751 74862.3 0.39789 0.00028542 0.16911 0.00012131 0.567 0.00040673 717.346458736307 720.01877288778 66.435 0.51649 66.435 66.24 66.757 0 122 40 5 0 0 0 0.00011601 2 38353 30.21 27.02 1 0.88792 0.91764 0 14678000 10318000 4359800 34818 1835 13194 13555 54397;54398 54398 TLSSPSNRPSGETSVPPPPAVGR 23 0 2 Unmodified _TLSSPSNRPSGETSVPPPPAVGR_ 0 0 1 A0A024QZC0;A0A024QZB7;A0A024QZ91;Q8WWM7 A0A024QZC0 A0A024QZC0 ATXN2L Ataxin-2-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.7364 3 764.064384 2289.17132 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.253 1 54.253 53.753 54.753 3.8147E-06 0 0 0 0.004056 1 30486 41.521 32.425 1 34819 14 13195 13556 54399 54399 TLSSPSNRPSGETSVPPPPAVGR 23 0 2 Unmodified _TLSSPSNRPSGETSVPPPPAVGR_ 0 0 1 A0A024QZC0;A0A024QZB7;A0A024QZ91;Q8WWM7 A0A024QZC0 A0A024QZC0 ATXN2L Ataxin-2-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.7368 3 764.064384 2289.17132 NaN NaN NaN 1.0653 0.00081399 NaN NaN NaN NaN 53.067 0.35893 53.067 52.859 53.218 0 0 0 0 0.0054176 1 30346 36.253 20.488 1 NaN NaN 0 7937300 0 7937300 34820 14 13195 13556 54400 54400 TLSYLLPAIVHINHQPFLER 20 0 1 Unmodified _TLSYLLPAIVHINHQPFLER_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3QRN5 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.107 3 787.774105 2360.30049 NaN NaN NaN -1.8212 -0.0014347 NaN NaN NaN NaN 128.01 0.33173 128.01 127.91 128.24 0 0 0 0 0.0074144 1 85627 26.593 19.641 1 NaN NaN 0 2558000 2558000 0 34821 1009 13196 13557 54401 54401 TLSYLLPAIVHINHQPFLER 20 0 1 Unmodified _TLSYLLPAIVHINHQPFLER_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;J3QRQ7;J3QRN5 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.4454 3 787.774105 2360.30049 69553.99 0.76397 0.00060183 -0.47385 -0.00037329 0.29012 0.00022855 788.107833596593 791.109595818427 127.27 0.68429 127.27 127.19 127.87 0 83 27 6 0 0 0 8.2565E-07 1 75884 65.25 50.48 1 0.90751 0.73229 0 10943000 6221100 4721600 34822 1009 13196 13557 54402 54402 TLTAIAVILTNFHDGRPLPIER 22 0 2 Unmodified _TLTAIAVILTNFHDGRPLPIER_ 0 0 1 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;Q05DQ5;Q05DF7;Q05BZ6 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.465 3 816.463819 2446.36963 NaN NaN NaN -0.37323 -0.00030473 NaN NaN NaN NaN 132.22 0.23212 132.22 132.11 132.34 0 0 0 0 0.013521 1 86358 32.227 24.654 1 NaN NaN 0 2626500 2626500 0 34823 512 13197 13558 54403 54403 TLTAVHDAILEDLVFPSEIVGK 22 1 0 Unmodified _TLTAVHDAILEDLVFPSEIVGK_ 0 0 0 P62081;B5MCP9;Q59FS3 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.1 3 789.765052 2366.27333 68236.77 0.93093 0.00073521 0.031868 2.5169E-05 0.96279 0.00076038 790.099392127998 792.770691431661 132.06 2.4542 132.06 130.77 133.22 0 1312 150 11 0 0 0 6.4791E-23 8 86123 123.19 123.19 1 0.96424 1.0906 0 103310000 54304000 49008000 34824 1631 13198 13559 54404;54405;54406;54407;54408;54409;54410;54411 54408 TLTAVHDAILEDLVFPSEIVGK 22 1 0 Unmodified _TLTAVHDAILEDLVFPSEIVGK_ 0 0 0 P62081;B5MCP9;Q59FS3 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.7713 3 789.765052 2366.27333 68385.79 1.0354 0.00081769 -0.13635 -0.00010768 0.89901 0.00071001 790.099286417041 792.770593725865 131.07 2.8212 131.07 129.97 132.79 0 1575 193 11 0 0 0 7.1857E-13 7 88177 99.407 99.407 1 0.97467 1.1124 0 154110000 74649000 79464000 34825 1631 13198 13559 54412;54413;54414;54415;54416;54417;54418 54416 TLTAVHDAILEDLVFPSEIVGK 22 1 0 Unmodified _TLTAVHDAILEDLVFPSEIVGK_ 0 0 0 P62081;B5MCP9;Q59FS3 P62081 P62081 RPS7 40S ribosomal protein S7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.1017 3 789.765052 2366.27333 NaN NaN NaN 0.62989 0.00049747 NaN NaN NaN NaN 132.98 0.25661 132.98 132.77 133.03 0 0 0 0 0.0020355 1 89160 36.253 27.965 1 NaN NaN 0 8411900 8411900 0 34826 1631 13198 13559 54419 54419 TLTAVHDAILEDLVFPSEIVGK 22 1 0 Unmodified _TLTAVHDAILEDLVFPSEIVGK_ 0 0 0 P62081;B5MCP9;Q59FS3 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.1537 3 789.765052 2366.27333 67792.58 0.76948 0.0006077 -0.31682 -0.00025022 0.45265 0.00035749 790.099275258662 792.770320898008 134.72 0.37366 134.72 134.53 134.9 0 42 8 11 0 0 0 3.2697E-16 1 82381 105.06 105.06 1 0.91715 0.81782 0 429410000 225770000 203640000 34827 1631 13198 13559 54420 54420 TLTAVHDAILEDLVFPSEIVGK 22 1 0 Unmodified _TLTAVHDAILEDLVFPSEIVGK_ 0 0 0 P62081;B5MCP9;Q59FS3 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 790.1006 3 789.765052 2366.27333 67794.2 0.9831 0.00077642 -0.098777 -7.801E-05 0.88432 0.00069841 790.09952809523 792.770695938717 134.68 0.2858 134.68 134.47 134.76 0 40 7 11 0 0 0 5.4357E-23 1 81470 123.53 123.53 1 0.93822 0.82041 0 468810000 240820000 227990000 34828 1631 13198 13559 54421 54421 TLTDEDEADQGGWLAAFWK 19 1 0 Unmodified _TLTDEDEADQGGWLAAFWK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1077.4932 2 1076.99473 2151.97491 61225.44 0.21044 0.00022665 -0.11909 -0.00012826 0.091353 9.8387E-05 1076.99264862794 1081.50275022447 128.86 0.36494 128.86 128.65 129.02 0 93 23 6 0 0 0 5.2134E-31 2 84001 149.41 131.22 1 0.83281 0.9061 0 48437000 27478000 20960000 34829 2023 13199 13560 54422;54423 54423 TLTDEDEADQGGWLAAFWK 19 1 0 Unmodified _TLTDEDEADQGGWLAAFWK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1081.5034 2 1076.99473 2151.97491 NaN NaN NaN -0.015562 -1.676E-05 NaN NaN NaN NaN 128.49 0.28636 128.49 128.34 128.62 0 0 0 0 2.5576E-41 3 85856 146.5 131.71 1 NaN NaN 0 25852000 0 25852000 34830 2023 13199 13560 54424;54425;54426 54425 TLTDEDEADQGGWLAAFWK 19 1 0 Unmodified _TLTDEDEADQGGWLAAFWK_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1077.5024 2 1076.99473 2151.97491 NaN NaN NaN 0.02933 3.1588E-05 NaN NaN NaN NaN 128.47 0.2744 128.47 128.34 128.61 0 0 0 0 9.7556E-13 2 85857 126.34 112.33 1 NaN NaN 0 35504000 35504000 0 34831 2023 13199 13560 54427;54428 54427 TLTELILDAQEHVK 14 1 0 Unmodified _TLTELILDAQEHVK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.4507 2 805.44342 1608.87229 67676.93 0.87452 0.00070438 -0.13572 -0.00010931 0.73881 0.00059507 805.443336515338 809.450256451988 104.98 1.4034 104.98 104.49 105.89 7.6294E-06 640 111 8 0 0 0 2.3941E-14 3 65212 142.07 125.04 1 0.72971 0.82531 0 85750000 51297000 34453000 34832 1244 13200 13561 54429;54430;54431 54430 TLTELILDAQEHVK 14 1 0 Unmodified _TLTELILDAQEHVK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.97 3 537.298039 1608.87229 82559.05 0.63697 0.00034224 -0.14418 -7.7465E-05 0.49279 0.00026478 537.297815259023 539.96929154601 105.01 1.3648 105.01 104.56 105.93 0 658 108 9 0 0 0 7.3734E-05 2 65281 63.709 50.296 1 0.66004 0.74535 0 80935000 50232000 30703000 34833 1244 13200 13561 54432;54433 54433 TLTELILDAQEHVK 14 1 0 Unmodified _TLTELILDAQEHVK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.2985 3 537.298039 1608.87229 81975.27 0.60608 0.00032565 -0.24787 -0.00013318 0.35821 0.00019246 537.297811710874 539.969217373092 104.16 1.4399 104.16 103.55 104.99 0 744 119 10 0 0 0 4.0507E-05 3 66113 79.885 79.885 1 0.65581 0.73272 0 90646000 53360000 37287000 34834 1244 13200 13561 54434;54435;54436 54435 TLTELILDAQEHVK 14 1 0 Unmodified _TLTELILDAQEHVK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.4509 2 805.44342 1608.87229 67600.53 0.5927 0.00047739 0.064614 5.2043E-05 0.65731 0.00052943 805.443523911433 809.450475484846 104.13 1.7665 104.13 103.53 105.29 0 715 146 8 0 0 0 3.8351E-06 2 65652 125.97 108.94 1 0.77524 0.8694 0 78543000 46933000 31610000 34835 1244 13200 13561 54437;54438 54438 TLTELILDAQEHVK 14 1 0 Unmodified _TLTELILDAQEHVK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.2989 3 537.298039 1608.87229 82249.07 0.3903 0.0002097 0.0059735 3.2096E-06 0.39627 0.00021291 537.298005327011 539.969390312614 116.41 1.2378 116.41 116.14 117.37 0 317 51 9 0 0 0 0.045921 1 68283 18.364 11.636 1 1.3596 1.1364 0 50073000 20701000 29372000 34836 1244 13200 13561 54439 54439 TLTELILDAQEHVK 14 1 0 Unmodified _TLTELILDAQEHVK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 805.4438 2 805.44342 1608.87229 67635.01 0.41791 0.00033661 0.22937 0.00018474 0.64728 0.00052135 805.443726315711 809.450552052876 116.43 1.4906 116.43 116.14 117.63 0 329 63 9 0 0 0 2.2915E-09 3 68349 140.24 123.22 1 1.4387 1.191 0 44291000 18611000 25679000 34837 1244 13200 13561 54440;54441;54442 54441 TLTELILDAQEHVK 14 1 0 Unmodified _TLTELILDAQEHVK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 539.9687 3 537.298039 1608.87229 81907.36 0.82181 0.00044156 -0.248 -0.00013325 0.57381 0.00030831 537.297891254117 539.969254520824 116.22 1.3657 116.22 115.9 117.26 0 371 63 10 0 0 0 0.0094125 3 67177 30.961 30.961 1 1.3656 1.1273 0 30930000 13174000 17757000 34838 1244 13200 13561 54443;54444;54445 54443 TLTELILDAQEHVK 14 1 0 Unmodified _TLTELILDAQEHVK_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 805.4438 2 805.44342 1608.87229 68036.36 0.81766 0.00065858 0.014622 1.1778E-05 0.83228 0.00067035 805.443499008612 809.450343877948 116.2 1.4086 116.2 115.94 117.35 0 366 65 9 0 0 0 2.6425E-09 3 67259 131.17 105.96 1 1.3911 1.1597 0 41128000 17503000 23624000 34839 1244 13200 13561 54446;54447;54448 54447 TLTGTVIDSGDGVTHVIPVAEGYVIGSCIK 30 1 0 Unmodified _TLTGTVIDSGDGVTHVIPVAEGYVIGSCIK_ 0 0 0 A0A024RAI1;P61158;B4DT29;B4DXW1;B4DTI0 A0A024RAI1 A0A024RAI1 ACTR3 Actin-related protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1023.2045 3 1020.19703 3057.56925 60615.74 0.87804 0.00089577 0.90383 0.00092208 1.7819 0.0018179 1020.86655892654 1023.20317278243 132.54 0.29454 132.54 132.42 132.71 0 53 12 8 0 0 0 0.023745 1 80621 15.434 15.434 1 2.4317 1.8915 0 3675300 1005400 2669900 34840 304 13201 13562 54449 54449 TLTLETDQSTSGCR 14 0 1 Unmodified _TLTLETDQSTSGCR_ 0 0 0 V9HWD1;B3KNK0;Q4W5G0 V9HWD1 V9HWD1 HEL106;TIGD2 Tigger transposable element-derived protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.8638 2 784.864676 1567.7148 71547.34 0.41574 0.0003263 0.57138 0.00044846 0.98712 0.00077476 784.864247634507 789.869726134069 50.933 0.45496 50.933 50.688 51.143 -3.8147E-06 91 28 5 0 0 0 0.026005 1 24970 32.254 26.409 1 1.2041 1.068 0 1316400 598080 718320 34841 914 13202 13563 54450 54450 TLTLETDQSTSGCR 14 0 1 Unmodified _TLTLETDQSTSGCR_ 0 0 0 V9HWD1;B3KNK0;Q4W5G0 V9HWD1 V9HWD1 HEL106;TIGD2 Tigger transposable element-derived protein 2 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.8622 2 784.864676 1567.7148 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.374 1 51.374 50.874 51.874 3.8147E-06 0 0 0 0.0044029 1 24703 56.225 30.839 1 34842 914 13202 13563 54451 54451 TLTLVDTGIGMTK 13 1 0 Unmodified _TLTLVDTGIGMTK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;O14942 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3768 2 675.370878 1348.7272 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.708 1 96.708 96.208 97.208 0 0 0 0 0.0022882 1 60338 68.069 0 1 34843 379 13203 13564 54452 54452 TLTLVDTGIGMTK 13 1 0 Unmodified _TLTLVDTGIGMTK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;O14942 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.3785 2 675.370878 1348.7272 73503.05 0.76759 0.00051841 -0.883 -0.00059635 -0.11541 -7.7943E-05 675.369836956431 679.377832714925 110.44 0.74945 110.44 110.12 110.87 0 114 34 6 0 0 0 0.0017989 1 63860 56.359 0 1 1.9465 1.5147 0 3369700 1109400 2260300 34844 379 13203 13564 54453 54453 TLTLVDTGIGMTK 13 1 0 Unmodified _TLTLVDTGIGMTK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;O14942 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.3787 2 675.370878 1348.7272 73809.68 0.77238 0.00052164 -0.42421 -0.0002865 0.34816 0.00023514 675.370411790547 679.377959786983 110.23 0.60252 110.23 110 110.6 0 115 32 5 0 0 0 0.00031691 1 62765 64.82 0 1 1.5607 1.2214 0 3733400 1181100 2552200 34845 379 13203 13564 54454 54454 TLTPDQWAR 9 0 1 Unmodified _TLTPDQWAR_ 0 0 0 A0A087WZT3;Q9H3K6 A0A087WZT3 A0A087WZT3 BOLA2 BolA-like protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.2836 2 544.28018 1086.54581 NaN NaN NaN -0.91289 -0.00049687 NaN NaN NaN NaN 57.492 0.52471 57.492 57.239 57.764 0 0 0 0 0.032349 1 33328 52.716 39.137 1 NaN NaN 0 3002900 0 3002900 34846 441 13204 13565 54455 54455 TLTPISAAYAR 11 0 1 Unmodified _TLTPISAAYAR_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.3292 2 582.324588 1162.63462 NaN NaN NaN 0.29524 0.00017192 NaN NaN NaN NaN 68.71 0.566 68.71 68.41 68.976 0 0 0 0 0.021891 1 39735 52.579 40.985 1 NaN NaN 0 6791300 0 6791300 34847 852 13205 13566 54456 54456 TLTPISGGQR 10 0 1 Unmodified _TLTPISGGQR_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.2921 2 515.288005 1028.56146 85700.41 0.076869 3.961E-05 0.42441 0.00021869 0.50128 0.0002583 515.288310352661 520.292161314812 38.238 0.69173 38.238 37.832 38.524 0 140 54 4 0 0 0 0.037167 1 16900 37.191 28.659 1 1.6992 1.4801 0 1504800 497520 1007300 34848 1103 13206 13567 54457 54457 TLTPLGR 7 0 1 Unmodified _TLTPLGR_ 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 384.236 2 379.231971 756.449388 99169.34 0.29429 0.0001116 -0.16121 -6.1138E-05 0.13307 5.0466E-05 379.231783659802 384.235970608679 40.378 0.72409 40.378 40.089 40.813 0 239 58 6 0 0 0 0.03153 1 21441 66.993 24.519 1 1.7703 2.0314 0 80384000 28580000 51804000 34849 1972 13207 13568 54458 54458 TLVAHYPPVQVLFEK 15 1 0 Unmodified _TLVAHYPPVQVLFEK_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.9947 3 580.994291 1739.96104 80591.47 0.63503 0.00036895 -0.27443 -0.00015944 0.36059 0.0002095 581.328100317732 583.999936398763 106 0.63028 106 105.65 106.28 -7.6294E-06 141 46 5 0 0 0 0.0066841 2 65859 30.575 23.603 1 0.97972 0.96651 0 9255600 4209800 5045900 34850 1601 13208 13569 54459;54460 54459 TLVAHYPPVQVLFEK 15 1 0 Unmodified _TLVAHYPPVQVLFEK_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.9955 3 580.994291 1739.96104 80603.46 0.83665 0.00048609 -0.056186 -3.2644E-05 0.78047 0.00045345 581.328391603475 584.000170461734 104.69 0.77141 104.69 104.39 105.17 0 102 61 4 0 0 0 0.0040735 1 66234 33.842 33.842 1 0.60938 0.62817 0 9620600 7365900 2254700 34851 1601 13208 13569 54461 54461 TLVAHYPPVQVLFEK 15 1 0 Unmodified _TLVAHYPPVQVLFEK_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.0004 3 580.994291 1739.96104 NaN NaN NaN 0.04733 2.7498E-05 NaN NaN NaN NaN 104.8 0.41232 104.8 104.67 105.08 0 0 0 0 0.023796 1 66458 31.319 20.375 1 NaN NaN 0 7671400 0 7671400 34852 1601 13208 13569 54462 54462 TLVAVERPLDDIIAQLPPPIK 21 1 1 Unmodified _TLVAVERPLDDIIAQLPPPIK_ 0 0 1 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.1208 3 766.785899 2297.33587 NaN NaN NaN -0.27354 -0.00020975 NaN NaN NaN NaN 129.94 0.47984 129.94 129.61 130.09 0 0 0 0 7.5045E-09 1 84528 77.391 72.182 1 NaN NaN 0 10610000 10610000 0 34853 1955 13209 13570 54463 54463 TLVAVERPLDDIIAQLPPPIK 21 1 1 Unmodified _TLVAVERPLDDIIAQLPPPIK_ 0 0 1 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.7874 3 766.785899 2297.33587 NaN NaN NaN 0.11373 8.7205E-05 NaN NaN NaN NaN 130.54 1.1364 130.54 130.38 131.51 0 0 0 0 5.1731E-19 2 85660 104.84 96.337 1 NaN NaN 0 22747000 22747000 0 34854 1955 13209 13570 54464;54465 54465 TLVAVERPLDDIIAQLPPPIK 21 1 1 Unmodified _TLVAVERPLDDIIAQLPPPIK_ 0 0 1 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.7938 3 766.785899 2297.33587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.55 1 129.55 129.05 130.05 0 0 0 0 4.4331E-08 1 84423 72.359 51.709 1 34855 1955 13209 13570 54466 54466 TLVAVERPLDDIIAQLPPPIK 21 1 1 Unmodified _TLVAVERPLDDIIAQLPPPIK_ 0 0 1 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.1199 3 766.785899 2297.33587 NaN NaN NaN 0.072203 5.5364E-05 NaN NaN NaN NaN 129.37 0.48935 129.37 128.97 129.46 0 0 0 0 2.8037E-23 1 86186 108.18 96.223 1 NaN NaN 0 24600000 24600000 0 34856 1955 13209 13570 54467 54467 TLVAVERPLDDIIAQLPPPIK 21 1 1 Unmodified _TLVAVERPLDDIIAQLPPPIK_ 0 0 1 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.1205 3 766.785899 2297.33587 NaN NaN NaN 0.050065 3.8389E-05 NaN NaN NaN NaN 129.76 1.2085 129.76 129.68 130.89 0 0 0 0 1.8408E-23 2 86745 111.66 103.47 1 NaN NaN 0 37154000 37154000 0 34857 1955 13209 13570 54468;54469 54468 TLVAVERPLDDIIAQLPPPIK 21 1 1 Unmodified _TLVAVERPLDDIIAQLPPPIK_ 0 0 1 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.7943 3 766.785899 2297.33587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.58 1 130.58 130.08 131.08 0 0 0 0 3.0415E-19 1 87306 108.17 88.08 1 34858 1955 13209 13570 54470 54470 TLVAVERPLDDIIAQLPPPIK 21 1 1 Unmodified _TLVAVERPLDDIIAQLPPPIK_ 0 0 1 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.121 3 766.785899 2297.33587 NaN NaN NaN 0.048778 3.7402E-05 NaN NaN NaN NaN 134.68 0.21121 134.68 134.59 134.8 0 0 0 0 9.9361E-24 1 82350 114.72 99.951 1 NaN NaN 0 33962000 33962000 0 34859 1955 13209 13570 54471 54471 TLVAVERPLDDIIAQLPPPIK 21 1 1 Unmodified _TLVAVERPLDDIIAQLPPPIK_ 0 0 1 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;H3BRM8 Q969X6 Q969X6 CIRH1A Cirhin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 767.1213 3 766.785899 2297.33587 NaN NaN NaN 0.33071 0.00025358 NaN NaN NaN NaN 134.63 0.22928 134.63 134.53 134.76 0 0 0 0 3.8775E-30 1 81422 125.09 110.32 1 NaN NaN 0 36690000 36690000 0 34860 1955 13209 13570 54472 54472 TLVEDLFADK 10 1 0 Unmodified _TLVEDLFADK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.8036 2 575.803154 1149.59175 80123.68 0.61648 0.00035497 0.20745 0.00011945 0.82393 0.00047442 575.80317109159 579.810425892156 103.53 1.0402 103.53 103.25 104.29 0 411 84 7 0 0 0 0.0043374 2 63832 61.65 47.931 1 0.99118 1.071 0 42493000 21072000 21421000 34861 1411 13210 13571 54473;54474 54473 TLVEDLFADK 10 1 0 Unmodified _TLVEDLFADK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.8036 2 575.803154 1149.59175 79834.98 0.78458 0.00045177 -0.064772 -3.7296E-05 0.71981 0.00041447 575.803183069765 579.810428745237 102.85 1.0473 102.85 102.56 103.61 0 448 84 7 0 0 0 0.00032788 2 64914 89.886 71.977 1 0.92038 1.0366 0 58526000 28655000 29872000 34862 1411 13210 13571 54475;54476 54475 TLVEDLFADK 10 1 0 Unmodified _TLVEDLFADK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.8105 2 575.803154 1149.59175 80882.6 0.9076 0.0005226 -0.075289 -4.3352E-05 0.83231 0.00047925 575.803111054742 579.810177438189 115.5 0.79279 115.5 115.14 115.93 0 146 35 6 0 0 0 0.040524 2 67520 38.567 34.633 1 0.87346 0.69739 0 6937700 3593400 3344300 34863 1411 13210 13571 54477;54478 54477 TLVEHVGMK 9 1 0 Oxidation (M) _TLVEHVGM(ox)K_ TLVEHVGM(1)K TLVEHVGM(43.73)K 0 1 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.2728 2 515.273509 1028.53247 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.263 1 21.263 20.763 21.763 0 0 0 0 0.029571 1 7588 43.734 17.997 1 34864 1761 13211 13572 54479 54479 1630 TLVEHVGMK 9 1 0 Oxidation (M) _TLVEHVGM(ox)K_ TLVEHVGM(1)K TLVEHVGM(72.23)K 0 1 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.2732 2 515.273509 1028.53247 85873.31 0.26957 0.0001389 0.51657 0.00026618 0.78614 0.00040508 515.272830580581 519.2804136847 21.069 0.47938 21.069 20.864 21.343 0 97 23 8 0 0 0 0.0015827 1 7272 72.23 72.23 1 1.4266 1.5105 0 20267000 7915400 12352000 34865 1761 13211 13572 54480 54480 1630 TLVLFPNIDAGSK 13 1 0 Unmodified _TLVLFPNIDAGSK_ 0 0 0 Q6QNY7;Q6QNY6;Q6QNY5;Q9Y223;B7Z5W2 Q6QNY7 Q6QNY7 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.8942 2 687.88501 1373.75547 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.08 1 112.08 111.58 112.58 7.6294E-06 0 0 0 0.045707 1 70692 42.001 24.975 1 34866 1858 13212 13573 54481 54481 TLVLFPNIDAGSK 13 1 0 Unmodified _TLVLFPNIDAGSK_ 0 0 0 Q6QNY7;Q6QNY6;Q6QNY5;Q9Y223;B7Z5W2 Q6QNY7 Q6QNY7 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.8852 2 687.88501 1373.75547 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.18 1 112.18 111.68 112.68 7.6294E-06 0 0 0 0.045707 1 70780 42.001 19.36 1 34867 1858 13212 13573 54482 54482 TLVPGPPGSSR 11 0 1 Unmodified _TLVPGPPGSSR_ 0 0 0 B2R8G6;A0A024R7P2;B7Z6M0;Q14318;M0R2K9;M0R1Q0;M0R1S6;M0R2Q6 B2R8G6 B2R8G6 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8;Peptidyl-prolyl cis-trans isomerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.3005 2 534.29583 1066.57711 83793.09 0.75695 0.00040444 -0.073764 -3.9412E-05 0.68319 0.00036502 534.295607399454 539.300267778571 46.36 0.51551 46.36 46.057 46.572 -3.8147E-06 109 38 5 0 0 0 0.01938 1 25586 44.318 26.932 1 0.5951 0.58868 0 12439000 7276000 5163500 34868 232 13213 13574 54483 54483 TLVQNNCLTRPNIYLIPDIDLK 22 1 1 Unmodified _TLVQNNCLTRPNIYLIPDIDLK_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.8088 3 871.807146 2612.39961 68354.38 0.71165 0.00062042 0.47605 0.00041502 1.1877 0.0010354 872.142280874243 877.814880757389 118.67 0.49343 118.67 118.4 118.9 -7.6294E-06 91 28 6 0 0 0 2.2837E-05 1 76189 41.521 41.521 1 0.75175 0.84155 0 6823200 2627800 4195400 34869 1798 13214 13575 54484 54484 TLVQNNCLTRPNIYLIPDIDLK 22 1 1 Unmodified _TLVQNNCLTRPNIYLIPDIDLK_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.8155 3 871.807146 2612.39961 66137.1 0.76332 0.00066547 -0.0076455 -6.6654E-06 0.75567 0.0006588 872.141187287108 878.149546386455 118.09 0.43192 118.09 117.88 118.31 0 120 27 7 0 0 0 2.1742E-05 2 77544 41.912 41.912 1 0.84169 0.94093 0 11802000 6035200 5766900 34870 1798 13214 13575 54485;54486 54485 TLVQNNCLTRPNIYLIPDIDLK 22 1 1 Unmodified _TLVQNNCLTRPNIYLIPDIDLK_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 878.1503 3 871.807146 2612.39961 NaN NaN NaN 0.6271 0.00054671 NaN NaN NaN NaN 130.51 0.59413 130.51 130.27 130.87 0 0 0 0 6.388E-05 1 78192 53.342 45.89 1 NaN NaN 0 2814800 0 2814800 34871 1798 13214 13575 54487 54487 TLVTQNSGVEALIHAILR 18 0 1 Unmodified _TLVTQNSGVEALIHAILR_ 0 0 0 A0A0S2Z487;A0A024R1X8;P14923 A0A0S2Z487 A0A0S2Z487 JUP Junction plakoglobin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.0051 3 645.70558 1934.09491 74888.43 0.66788 0.00043125 -0.31228 -0.00020164 0.3556 0.00022962 645.705515529148 649.37595213725 133.27 0.25177 133.27 133.07 133.32 0 31 7 7 0 0 0 4.5372E-10 1 87207 79.676 79.676 1 0.29274 0.30121 0 19626000 15472000 4153600 34872 94 13215 13576 54488 54488 TLVTQNSGVEALIHAILR 18 0 1 Unmodified _TLVTQNSGVEALIHAILR_ 0 0 0 A0A0S2Z487;A0A024R1X8;P14923 A0A0S2Z487 A0A0S2Z487 JUP Junction plakoglobin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.707 3 645.70558 1934.09491 78046.52 0.89289 0.00057654 0.30301 0.00019566 1.1959 0.0007722 646.039705908018 649.376166523264 133.23 0.56772 133.23 132.77 133.34 0 58 23 6 0 0 0 0.00027176 2 89109 39.657 39.657 1 0.18734 0.18574 0 12054000 10307000 1746700 34873 94 13215 13576 54489;54490 54490 TLYFFIAGR 9 0 1 Unmodified _TLYFFIAGR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3004 2 544.300384 1086.58622 85467.86 1.1561 0.00062925 -0.50123 -0.00027282 0.65483 0.00035643 544.300267058329 549.30406224952 110.69 0.75669 110.69 110.33 111.09 0 116 52 4 0 0 0 0.0049428 1 69662 67.981 56.759 1 0.4464 0.44363 0 8443500 5979500 2464000 34874 1479 13216 13577 54491 54491 TLYFFIAGR 9 0 1 Unmodified _TLYFFIAGR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.301 2 544.300384 1086.58622 83875.39 0.84748 0.00046128 -0.16208 -8.8218E-05 0.6854 0.00037307 544.300156377106 549.30416883794 121.46 1.2719 121.46 121.19 122.46 -7.6294E-06 182 62 5 0 0 0 0.012771 2 72271 57.177 51.074 1 0.46714 0.39642 0 5150800 3399200 1751600 34875 1479 13216 13577 54492;54493 54492 TLYFFIAGR 9 0 1 Unmodified _TLYFFIAGR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.3005 2 544.300384 1086.58622 83532.32 0.75072 0.00040862 -0.083052 -4.5205E-05 0.66767 0.00036341 544.300185084298 549.304130804975 121.26 1.2307 121.26 120.91 122.14 7.6294E-06 212 61 5 0 0 0 0.027387 2 71199 47.082 40.491 1 0.47595 0.39885 0 4882600 3418100 1464400 34876 1479 13216 13577 54494;54495 54494 TLYGFGG 7 0 0 Unmodified _TLYGFGG_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3466 1 714.345717 713.338441 NaN NaN NaN -1.0733 -0.0007667 NaN NaN NaN NaN 83.414 4.7328 83.414 82.802 87.535 0 0 0 0 0.00011123 1 52695 129.52 117.17 1 34877 828 13217 13578 54496 54496 TLYGFGG 7 0 0 Unmodified _TLYGFGG_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3483 1 714.345717 713.338441 NaN NaN NaN -0.13867 -9.9057E-05 NaN NaN NaN NaN 90.221 1.1879 90.221 89.448 90.636 0 0 0 0 0.00090915 1 54782 119.23 106.88 1 34878 828 13217 13578 54497 54497 TLYGFGG 7 0 0 Unmodified _TLYGFGG_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3467 1 714.345717 713.338441 NaN NaN NaN 0.69535 0.00049672 NaN NaN NaN NaN 93.14 0.70487 93.14 92.55 93.255 7.6294E-06 0 0 0 0.00090915 1 56138 119.23 110.62 1 34879 828 13217 13578 54498 54498 TLYGFGG 7 0 0 Unmodified _TLYGFGG_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3469 1 714.345717 713.338441 NaN NaN NaN 0.61959 0.0004426 NaN NaN NaN NaN 102.94 0.43504 102.94 102.78 103.21 0 0 0 0 0.00090915 1 63450 119.23 111.97 1 34880 828 13217 13578 54499 54499 TLYGFGG 7 0 0 Unmodified _TLYGFGG_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.3492 1 714.345717 713.338441 NaN NaN NaN 0.76791 0.00054855 NaN NaN NaN NaN 102.08 0.46928 102.08 101.86 102.33 0 0 0 0 0.049668 1 64515 86.344 78.829 1 34881 828 13217 13578 54500 54500 TLYGFGG 7 0 0 Unmodified _TLYGFGG_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.3463 1 714.345717 713.338441 NaN NaN NaN -0.92696 -0.00066217 NaN NaN NaN NaN 94.98 5.6981 94.98 94.143 99.841 0 0 0 0 0.029588 1 55473 102.12 97.375 1 34882 828 13217 13578 54501 54501 TLYGFGG 7 0 0 Unmodified _TLYGFGG_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.3461 1 714.345717 713.338441 NaN NaN NaN 0.24473 0.00017482 NaN NaN NaN NaN 102.1 3.643 102.1 101.71 105.35 0 0 0 0 0.053068 1 59091 72.62 66.771 1 34883 828 13217 13578 54502 54502 TLYGFGG 7 0 0 Unmodified _TLYGFGG_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 714.3459 1 714.345717 713.338441 NaN NaN NaN 0.5177 0.00036982 NaN NaN NaN NaN 112.77 1.4403 112.77 112.28 113.72 0 0 0 0 0.054284 1 65153 76.347 71.6 1 34884 828 13217 13578 54503 54503 TLYVEEVVPNVIEPSFGLGR 20 0 1 Unmodified _TLYVEEVVPNVIEPSFGLGR_ 0 0 0 A0A090N8G0;P41250 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1115.0977 2 1109.59134 2217.16813 58316.28 0.37912 0.00042067 0.45723 0.00050734 0.83635 0.00092801 1110.09269405406 1115.09749420178 130.28 0.58459 130.28 130.05 130.64 0 207 37 7 0 0 0 1.1847E-09 1 84909 98.531 98.531 1 2.8447 2.9824 0 12284000 3246000 9038300 34885 457 13218 13579 54504 54504 TLYVEEVVPNVIEPSFGLGR 20 0 1 Unmodified _TLYVEEVVPNVIEPSFGLGR_ 0 0 0 A0A090N8G0;P41250 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1115.098 2 1109.59134 2217.16813 58471.29 0.18035 0.00020012 0.41811 0.00046393 0.59846 0.00066404 1110.09301937681 1115.09742781598 129.9 0.76303 129.9 129.62 130.39 0 250 52 7 0 0 0 8.7426E-07 1 86756 79.466 79.466 1 2.9748 2.9502 0 15845000 3803100 12042000 34886 457 13218 13579 54505 54505 TMCGTLDYLPPEMIEGR 17 0 1 2 Oxidation (M) _TM(ox)CGTLDYLPPEM(ox)IEGR_ TM(1)CGTLDYLPPEM(1)IEGR TM(63.09)CGTLDYLPPEM(63.09)IEGR 0 2 0 B2RC06;J3KT86;A0A0A0MSY3;V9HW16;Q5Y191;Q9UQB9;M0QYK8;Q96GD4;J3QLN8 B2RC06;Q96GD4 Q96GD4 AURKB;AURKC;HEL-S-90 Aurora kinase C;Aurora kinase B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1012.9531 2 1007.94957 2013.88458 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.674 1 90.674 90.174 91.174 0 0 0 0 0.00039432 1 54807 63.091 54.987 1 34887 881;1967 13219 13580 54506 54506 694;695 TMLELINQLDGFDPR 15 0 1 Oxidation (M) _TM(ox)LELINQLDGFDPR_ TM(1)LELINQLDGFDPR TM(86.91)LELINQLDGFDPR 0 1 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.4479 2 889.443094 1776.87163 NaN NaN NaN -0.099649 -8.8632E-05 NaN NaN NaN NaN 117.13 0.37315 117.13 116.96 117.33 0 0 0 0 9.5242E-06 1 74865 86.911 70.279 1 NaN NaN 0 6758100 0 6758100 34888 620 13220 13581 54507 54507 479 TMLELLNQLDGFQPNTQVK 19 1 0 Oxidation (M) _TM(ox)LELLNQLDGFQPNTQVK_ TM(1)LELLNQLDGFQPNTQVK TM(41.09)LELLNQLDGFQPNTQVK 0 1 0 E9PM69;R4GNH3;A0A140VK42;P17980;E9PKD5 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1107.5745 2 1103.06464 2204.11472 NaN NaN NaN -0.08041 -8.8698E-05 NaN NaN NaN NaN 117.26 0.35892 117.26 117.08 117.44 -7.6294E-06 0 0 0 0.0024615 1 74922 41.092 35.249 1 NaN NaN 0 5937800 0 5937800 34889 617 13221 13582 54508 54508 469 TMLELLNQLDGFQPNTQVK 19 1 0 Oxidation (M) _TM(ox)LELLNQLDGFQPNTQVK_ TM(1)LELLNQLDGFQPNTQVK TM(55.31)LELLNQLDGFQPNTQVK 0 1 0 E9PM69;R4GNH3;A0A140VK42;P17980;E9PKD5 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1107.5756 2 1103.06464 2204.11472 NaN NaN NaN 0.34475 0.00038028 NaN NaN NaN NaN 116.75 0.44215 116.75 116.61 117.05 7.6294E-06 0 0 0 0.00012283 2 76424 55.314 46.801 1 NaN NaN 0 6301200 0 6301200 34890 617 13221 13582 54509;54510 54509 469 TMLYTPQEMK 10 1 0 2 Oxidation (M) _TM(ox)LYTPQEM(ox)K_ TM(1)LYTPQEM(1)K TM(65.54)LYTPQEM(65.54)K 0 2 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4G5;J3QLR1 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3011 2 637.293782 1272.57301 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.312 1 33.312 32.812 33.812 0 0 0 0 0.0031557 1 16670 65.535 38.232 1 34891 1076 13222 13583 54511 54511 828;829 TMTDVVGNPEEER 13 0 1 Oxidation (M) _TM(ox)TDVVGNPEEER_ TM(1)TDVVGNPEEER TM(79.66)TDVVGNPEEER 0 1 0 A0A024R137;A0A024R102;Q96GM5;A8K9I5;F8VRQ4;H0YHV1 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.8334 2 746.832845 1491.65114 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.718 1 33.718 33.218 34.218 0 0 0 0 0.0003953 1 16805 79.659 63.405 1 34892 65 13223 13584 54512 54512 37 TMTDVVGNPEEER 13 0 1 Oxidation (M) _TM(ox)TDVVGNPEEER_ TM(1)TDVVGNPEEER TM(105.46)TDVVGNPEEER 0 1 0 A0A024R137;A0A024R102;Q96GM5;A8K9I5;F8VRQ4;H0YHV1 A0A024R137 A0A024R137 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.3344 2 746.832845 1491.65114 70471.72 0.55057 0.00041118 -0.47389 -0.00035392 0.076677 5.7265E-05 746.833372051073 752.336739115544 33.127 0.34696 33.127 32.932 33.279 0 102 31 5 0 0 0 2.7767E-06 2 16523 105.46 79.418 1 0.84284 0.83534 0 12114000 6875200 5238900 34893 65 13223 13584 54513;54514 54514 37 TMTELEIDMNQR 12 0 1 2 Oxidation (M) _TM(ox)TELEIDM(ox)NQR_ TM(1)TELEIDM(1)NQR TM(93.1)TELEIDM(93.1)NQR 0 2 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.8423 2 756.837073 1511.65959 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.351 1 44.351 43.851 44.851 0 0 0 0 3.5663E-05 1 23807 93.096 75.865 1 34894 613 13224 13585 54515 54515 463;464 TMTELEIDMNQR 12 0 1 2 Oxidation (M) _TM(ox)TELEIDM(ox)NQR_ TM(1)TELEIDM(1)NQR TM(85.96)TELEIDM(85.96)NQR 0 2 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.8421 2 756.837073 1511.65959 NaN NaN NaN -0.00058514 -4.4286E-07 NaN NaN NaN NaN 43.577 0.6265 43.577 43.176 43.802 0 0 0 0 0.00013565 1 23641 85.958 69.384 1 NaN NaN 0 8381800 0 8381800 34895 613 13224 13585 54516 54516 463;464 TMVIIEMTK 9 1 0 Oxidation (M) _TM(ox)VIIEMTK_ TM(0.5)VIIEM(0.5)TK TM(0)VIIEM(0)TK 0 1 0 A0A140T8X2;Q6ZTR5 A0A140T8X2 A0A140T8X2 CXorf22 Uncharacterized protein CXorf22 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 541.2861 2 541.285228 1080.5559 81042.5 0.30316 0.0001641 0.70019 0.000379 1.0034 0.0005431 541.28560351019 545.292542434227 22.454 0.57635 22.454 22.227 22.804 0 109 23 7 0 0 0 0.0019577 1 7197 70.268 6.788 2 0.04734 0.040425 0 65787000 62770000 3016800 34896 596 13225 13586 54517 54517 456;457 TMYPAPVTSSVYLSR 15 0 1 Oxidation (M) _TM(ox)YPAPVTSSVYLSR_ TM(1)YPAPVTSSVYLSR TM(45.92)YPAPVTSSVYLSR 0 1 0 Q8N516;Q4LE38;O95163;F5H2T0;B3KXE7;B4E3I9;Q68DI5 Q8N516 Q8N516 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.4261 2 844.42163 1686.82871 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.913 1 82.913 82.413 83.413 0 0 0 0 0.0054514 1 50768 45.915 31.496 1 34897 1419 13226 13587 54518 54518 1110 TNAENEFVTIK 11 1 0 Unmodified _TNAENEFVTIK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3229 2 633.322242 1264.62993 NaN NaN NaN -0.16305 -0.00010326 NaN NaN NaN NaN 63.606 1.8519 63.606 62.845 64.697 0 0 0 0 2.5701E-52 2 36661 191.4 156.04 1 NaN NaN 0 429870000 429870000 0 + 34898 1308;1309 13227 13588 54519;54520 54520 TNAENEFVTIK 11 1 0 Unmodified _TNAENEFVTIK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3222 2 633.322242 1264.62993 NaN NaN NaN -0.25194 -0.00015956 NaN NaN NaN NaN 62.323 1.7114 62.323 61.641 63.353 0 0 0 0 4.0226E-05 2 36684 100.48 80.69 1 NaN NaN 0 394680000 394680000 0 + 34899 1308;1309 13227 13588 54521;54522 54522 TNAENEFVTIK 11 1 0 Unmodified _TNAENEFVTIK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.3228 2 633.322242 1264.62993 NaN NaN NaN -0.35301 -0.00022357 NaN NaN NaN NaN 73.297 1.9091 73.297 72.951 74.86 0 0 0 0 0.001072 2 39200 85.963 66.176 1 NaN NaN 0 124810000 124810000 0 + 34900 1308;1309 13227 13588 54523;54524 54524 TNAENEFVTIK 11 1 0 Unmodified _TNAENEFVTIK_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.3224 2 633.322242 1264.62993 NaN NaN NaN -0.40822 -0.00025853 NaN NaN NaN NaN 73.796 2.0624 73.796 73.214 75.277 0 0 0 0 0.00040353 1 38595 90.827 71.04 1 NaN NaN 0 103890000 103890000 0 + 34901 1308;1309 13227 13588 54525 54525 TNAENEFVTIKK 12 2 0 Unmodified _TNAENEFVTIKK_ 0 0 1 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.3698 2 697.369724 1392.72489 NaN NaN NaN 0.16579 0.00011562 NaN NaN NaN NaN 41.794 0.57464 41.794 41.501 42.076 0 0 0 0 1.3445E-09 1 22090 137.89 121.22 1 NaN NaN 0 10277000 10277000 0 + 34902 1308;1309 13228 13589 54526 54526 TNAFLVATSAPQAVLYNDR 19 0 1 Unmodified _TNAFLVATSAPQAVLYNDR_ 0 0 0 Q14432 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1031.533 2 1026.03145 2050.04835 NaN NaN NaN -2.5649 -0.0026317 NaN NaN NaN NaN 111.81 0.16832 111.81 111.7 111.87 0 0 0 0 0.0026158 1 72195 47.532 34.905 1 NaN NaN 0 3983400 0 3983400 34903 1732 13229 13590 54527 54527 TNCCDQCGAYIYTK 14 1 0 Unmodified _TNCCDQCGAYIYTK_ 0 0 0 A6NHB5;Q14202;A6NHN7;A8K3Z7;A6NL54 A6NHB5 A6NHB5 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.8614 2 877.352564 1752.69058 68379.43 0.55265 0.00048487 0.32742 0.00028726 0.88007 0.00077213 877.853792239782 881.861964050508 40.557 0.28179 40.557 40.46 40.741 0 58 21 5 0 0 0 5.8055E-05 2 21654 91.858 89.344 1 0.77125 0.80273 0 11092000 4528400 6563400 34904 681 13230 13591 54528;54529 54528 TNCNVAVINVGAPAAGMNAAVR 22 0 1 Oxidation (M) _TNCNVAVINVGAPAAGM(ox)NAAVR_ TNCNVAVINVGAPAAGM(1)NAAVR TNCNVAVINVGAPAAGM(51.55)NAAVR 0 1 0 Q01813;Q8WTZ9;B1APP6 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1099.0498 2 1093.54388 2185.07321 NaN NaN NaN 0.23704 0.00025921 NaN NaN NaN NaN 81.384 0.38054 81.384 81.193 81.573 -7.6294E-06 0 0 0 3.8284E-05 2 48420 51.546 41.754 1 NaN NaN 0 6909100 0 6909100 34905 1677 13231 13592 54530;54531 54531 1478 TNCNVAVINVGAPAAGMNAAVR 22 0 1 Oxidation (M) _TNCNVAVINVGAPAAGM(ox)NAAVR_ TNCNVAVINVGAPAAGM(1)NAAVR TNCNVAVINVGAPAAGM(101.43)NAAVR 0 1 0 Q01813;Q8WTZ9;B1APP6 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1098.5464 2 1093.54388 2185.07321 NaN NaN NaN 0.38575 0.00042184 NaN NaN NaN NaN 80.47 0.35374 80.47 80.286 80.639 0 0 0 0 4.6262E-19 1 48963 101.43 86.4 1 NaN NaN 0 7067400 0 7067400 34906 1677 13231 13592 54532 54532 1478 TNEGVIEFR 9 0 1 Unmodified _TNEGVIEFR_ 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.7729 2 532.772188 1063.52982 83199.01 0.56355 0.00030025 0.18292 9.7452E-05 0.74647 0.0003977 532.772567889558 537.776452886847 59.622 0.82074 59.622 59.253 60.074 3.8147E-06 271 67 6 0 0 0 4.3957E-08 2 34075 145.72 118.47 1 1.3227 1.4436 0 51859000 20492000 31367000 34907 748 13232 13593 54533;54534 54534 TNEGVIEFR 9 0 1 Unmodified _TNEGVIEFR_ 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.7731 2 532.772188 1063.52982 82988.24 0.79685 0.00042454 0.38663 0.00020599 1.1835 0.00063052 532.772590893492 537.776436632598 58.517 0.6992 58.517 58.171 58.871 0 232 59 6 0 0 0 9.4291E-25 2 34038 176.43 149.3 1 1.2082 1.3804 0 90339000 37912000 52427000 34908 748 13232 13593 54535;54536 54536 TNFYAEQGGQASDR 14 0 1 Unmodified _TNFYAEQGGQASDR_ 0 0 0 Q5JTZ9 Q5JTZ9 Q5JTZ9 AARS2 Alanine--tRNA ligase, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.3453 2 772.342226 1542.6699 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.211 1 30.211 29.711 30.711 0 0 0 0 0.017671 1 14756 45.257 30.838 1 34909 1809 13233 13594 54537 54537 TNGKEPELLEPIPYEFMA 18 1 0 Oxidation (M) _TNGKEPELLEPIPYEFM(ox)A_ TNGKEPELLEPIPYEFM(1)A TNGKEPELLEPIPYEFM(67.46)A 0 1 1 Q6IAX2;P46778;Q59GK9 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1051.5154 2 1047.50863 2093.00271 58881.22 0.90153 0.00094436 -0.62315 -0.00065276 0.27838 0.00029161 1048.00979784078 1051.51539887147 118.32 0.52973 118.32 118.08 118.61 0 191 31 9 0 0 0 2.3971E-05 1 75839 67.456 67.456 1 1.2653 1.2969 0 28515000 12072000 16443000 34910 1571 13234 13595 54538 54538 1350 TNGKEPELLEPIPYEFMA 18 1 0 Oxidation (M) _TNGKEPELLEPIPYEFM(ox)A_ TNGKEPELLEPIPYEFM(1)A TNGKEPELLEPIPYEFM(41.05)A 0 1 1 Q6IAX2;P46778;Q59GK9 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1052.019 2 1047.50863 2093.00271 58774.17 0.81837 0.00085725 -0.90256 -0.00094544 -0.084188 -8.8188E-05 1048.00926687704 1052.01689351895 117.85 0.48222 117.85 117.6 118.08 7.6294E-06 215 33 8 0 0 0 0.00065254 1 77253 41.052 36.251 1 1.3387 1.3798 0 32597000 13445000 19152000 34911 1571 13234 13595 54539 54539 1350 TNGKEPELLEPIPYEFMA 18 1 0 Oxidation (M) _TNGKEPELLEPIPYEFM(ox)A_ TNGKEPELLEPIPYEFM(1)A TNGKEPELLEPIPYEFM(45.28)A 0 1 1 Q6IAX2;P46778;Q59GK9 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1052.0178 2 1047.50863 2093.00271 59677.35 0.67141 0.00070331 -0.018312 -1.9182E-05 0.6531 0.00068413 1048.01033624358 1052.01736057446 130.31 0.58698 130.31 130.05 130.63 0 174 24 10 0 0 0 0.00036057 1 77971 45.28 45.28 1 0.72904 0.58546 0 14869000 8917100 5951700 34912 1571 13234 13595 54540 54540 1350 TNHIETLGK 9 1 0 Unmodified _TNHIETLGK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.7817 2 506.774731 1011.53491 NaN NaN NaN -0.50754 -0.00025721 NaN NaN NaN NaN 21.071 0.43979 21.071 20.912 21.352 0 0 0 0 4.5835E-11 1 7451 133.23 110.16 1 NaN NaN 0 9492500 0 9492500 34913 1699 13235 13596 54541 54541 TNHIETLGK 9 1 0 Unmodified _TNHIETLGK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.7821 2 506.774731 1011.53491 86152.63 0.45058 0.00022834 0.027737 1.4057E-05 0.47831 0.0002424 506.774701785524 510.78197615674 20.735 0.7463 20.735 20.381 21.127 0 55 28 7 0 0 0 2.4814E-17 1 7007 166.34 139.08 1 0.83112 0.91179 0 41199000 23127000 18072000 34914 1699 13235 13596 54542 54542 TNHIETLGK 9 1 0 Unmodified _TNHIETLGK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.7817 2 506.774731 1011.53491 NaN NaN NaN 0.034153 1.7308E-05 NaN NaN NaN NaN 22.398 0.41774 22.398 22.227 22.645 0 0 0 0 0.011514 1 7238 65.535 56.119 1 NaN NaN 0 2341900 0 2341900 34915 1699 13235 13596 54543 54543 TNHIETLGK 9 1 0 Unmodified _TNHIETLGK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.7818 2 506.774731 1011.53491 85983.37 0.042047 2.1308E-05 -0.13434 -6.8079E-05 -0.09229 -4.677E-05 506.774649893237 510.781649080391 22.306 0.66733 22.306 22.069 22.737 0 87 28 6 0 0 0 0.039216 1 6674 42.348 30.142 1 1.6339 1.3033 0 2404700 930920 1473800 34916 1699 13235 13596 54544 54544 TNHIGHTGYLNTVTVSPDGSLCASGGK 27 1 0 Unmodified _TNHIGHTGYLNTVTVSPDGSLCASGGK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6REE5;D6RFX4;B4DVD2;H0Y8R5 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.5887 4 686.583062 2742.30314 72729.71 0.58331 0.00040049 -0.13709 -9.4121E-05 0.44622 0.00030637 686.833907009085 688.837277418773 69.008 1.1129 69.008 68.603 69.716 0 487 95 7 0 0 0 3.4248E-16 3 41013 73.865 73.865 1 1.703 1.7605 0 32978000 13950000 19028000 34917 1227 13236 13597 54545;54546;54547 54546 TNHIGHTGYLNTVTVSPDGSLCASGGK 27 1 0 Unmodified _TNHIGHTGYLNTVTVSPDGSLCASGGK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6REE5;D6RFX4;B4DVD2;H0Y8R5 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.8377 4 686.583062 2742.30314 73391.59 0.47944 0.00032918 0.082525 5.6661E-05 0.56197 0.00038584 686.833959134381 688.837750512565 79.543 0.58963 79.543 79.247 79.836 0 188 36 9 0 0 0 0.0030806 1 42904 26.446 26.446 1 1.8392 1.43 0 3649100 1381900 2267300 34918 1227 13236 13597 54548 54548 TNHIYVSSDDIK 12 1 0 Unmodified _TNHIYVSSDDIK_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.3436 2 696.343706 1390.67286 72964.69 0.99666 0.00069402 0.43831 0.00030521 1.435 0.00099923 696.343847887044 700.350451128835 38.03 0.39969 38.03 37.799 38.199 0 185 33 8 0 0 0 1.6662E-06 1 19406 111.94 85.552 1 0.90783 0.97102 0 32330000 15583000 16747000 34919 1854 13237 13598 54549 54549 TNHIYVSSDDIK 12 1 0 Unmodified _TNHIYVSSDDIK_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.3456 2 696.343706 1390.67286 72567.68 1.0227 0.00071213 0.80515 0.00056066 1.8278 0.0012728 696.344779494701 700.350537552163 36.594 0.48992 36.594 36.41 36.9 0 166 35 8 0 0 0 6.6834E-05 2 18779 97.734 75.648 1 0.76326 0.85115 0 52104000 27360000 24743000 34920 1854 13237 13598 54550;54551 54550 TNHIYVSSDDIK 12 1 0 Unmodified _TNHIYVSSDDIK_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.5659 3 464.564896 1390.67286 88933.55 0.58502 0.00027178 0.6002 0.00027883 1.1852 0.00055061 464.564912249686 467.236740859733 36.602 0.62937 36.602 36.353 36.982 0 167 48 7 0 0 0 0.026762 1 18794 18.457 3.8957 1 1.0725 1.1999 0 53738000 27886000 25852000 34921 1854 13237 13598 54552 54552 TNHIYVSSDDIK 12 1 0 Unmodified _TNHIYVSSDDIK_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 700.3512 2 696.343706 1390.67286 72344.13 0.4788 0.00033341 0.26576 0.00018506 0.74456 0.00051847 696.344200444543 700.350765016258 43.59 0.423 43.59 43.359 43.782 0 125 28 6 0 0 0 0.0033667 1 20552 56.225 36.438 1 0.96253 0.75407 0 3198800 1797400 1401400 34922 1854 13237 13598 54553 54553 TNHIYVSSDDIK 12 1 0 Unmodified _TNHIYVSSDDIK_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.3511 2 696.343706 1390.67286 72219.93 0.37872 0.00026372 1.0061 0.00070058 1.3848 0.0009643 696.344966185028 700.350733762412 43.524 0.45483 43.524 43.323 43.778 3.8147E-06 143 29 7 0 0 0 0.014424 1 19942 43.604 35.561 1 0.80494 0.63714 0 3178100 1875600 1302500 34923 1854 13237 13598 54554 54554 TNIDESAMPPPPPQGVK 17 1 0 Oxidation (M) _TNIDESAM(ox)PPPPPQGVK_ TNIDESAM(1)PPPPPQGVK TNIDESAM(77.18)PPPPPQGVK 0 1 0 A0A024R9J0;O60216;E5RFZ5 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.4385 2 897.440551 1792.86655 65545.97 0.40809 0.00036624 0.011204 1.0055E-05 0.41929 0.00037629 897.942367610771 901.948933108058 52.42 0.49429 52.42 52.153 52.647 0 117 36 4 0 0 0 2.5508E-05 2 29053 77.185 77.185 1 0.81359 0.84022 0 11003000 5916100 5086700 34924 280 13238 13599 54555;54556 54556 212 TNIDESAMPPPPPQGVK 17 1 0 Oxidation (M) _TNIDESAM(ox)PPPPPQGVK_ TNIDESAM(1)PPPPPQGVK TNIDESAM(45.26)PPPPPQGVK 0 1 0 A0A024R9J0;O60216;E5RFZ5 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.9487 2 897.440551 1792.86655 NaN NaN NaN -0.27576 -0.00024748 NaN NaN NaN NaN 51.424 0.25894 51.424 51.243 51.502 0 0 0 0 0.0026643 1 29156 45.257 38.369 1 NaN NaN 0 2604200 0 2604200 34925 280 13238 13599 54557 54557 212 TNIDESAMPPPPPQGVK 17 1 0 Oxidation (M) _TNIDESAM(ox)PPPPPQGVK_ TNIDESAM(1)PPPPPQGVK TNIDESAM(42.84)PPPPPQGVK 0 1 0 A0A024R9J0;O60216;E5RFZ5 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.9425 2 897.440551 1792.86655 66339.56 0.36831 0.00033054 -0.12331 -0.00011067 0.245 0.00021987 897.941937838114 901.948961864327 51.579 0.32927 51.579 51.369 51.698 0 62 25 4 0 0 0 0.01637 1 29118 42.843 42.843 1 0.88117 0.92057 0 10121000 6493900 3627000 34926 280 13238 13599 54558 54558 212 TNIIPVLEDAR 11 0 1 Unmodified _TNIIPVLEDAR_ 0 0 0 A6NHQ2 A6NHQ2 A6NHQ2 FBLL1 rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.8483 2 620.848427 1239.6823 75660.82 0.80023 0.00049682 -0.56259 -0.00034928 0.23765 0.00014754 620.847904275748 625.852244184494 94.198 2.1168 94.198 93.546 95.663 0 849 183 8 0 0 0 0.00067761 4 57393 73.327 0 1 0.75605 0.89693 0 666760000 383530000 283240000 34927 683 13239 13600 54559;54560;54561;54562 54561 TNIIPVLEDAR 11 0 1 Unmodified _TNIIPVLEDAR_ 0 0 0 A6NHQ2 A6NHQ2 A6NHQ2 FBLL1 rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.8491 2 620.848427 1239.6823 76507.23 0.63096 0.00039173 -0.15855 -9.8435E-05 0.47241 0.0002933 620.848370889264 625.852376667609 93.158 1.5024 93.158 92.69 94.192 0 747 130 10 0 0 0 0.00026131 3 58123 90.149 0 1 0.75494 0.88263 0 602320000 345790000 256530000 34928 683 13239 13600 54563;54564;54565 54565 TNIIPVLEDAR 11 0 1 Unmodified _TNIIPVLEDAR_ 0 0 0 A6NHQ2 A6NHQ2 A6NHQ2 FBLL1 rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.8485 2 620.848427 1239.6823 76286.3 0.66389 0.00041218 -0.069253 -4.2996E-05 0.59464 0.00036918 620.848522125884 625.852413641159 107.46 2.065 107.46 106.99 109.05 0 600 111 10 0 0 0 0.0059147 3 61923 55.353 0 1 0.9216 0.7986 0 160710000 82369000 78338000 34929 683 13239 13600 54566;54567;54568 54568 TNIIPVLEDAR 11 0 1 Unmodified _TNIIPVLEDAR_ 0 0 0 A6NHQ2 A6NHQ2 A6NHQ2 FBLL1 rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 620.8488 2 620.848427 1239.6823 76757.26 0.55142 0.00034235 0.064058 3.977E-05 0.61548 0.00038212 620.848565948129 625.852505345243 107.26 2.2036 107.26 106.83 109.03 0 662 123 10 0 0 0 0.025327 3 60856 41.283 0 1 0.91329 0.79753 0 154510000 81632000 72877000 34930 683 13239 13600 54569;54570;54571 54571 TNILNSEQVIVEVLPNQPVK 20 1 0 Unmodified _TNILNSEQVIVEVLPNQPVK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1122.1327 2 1117.62318 2233.2318 59625.15 0.18862 0.0002108 -0.45216 -0.00050534 -0.26354 -0.00029454 1117.62151041776 1122.13175209216 120.25 0.35564 120.25 120.09 120.44 7.6294E-06 134 24 8 0 0 0 2.1719E-05 2 77414 48.704 48.704 1 1.2433 1.2759 0 14444000 6677700 7766800 34931 684 13240 13601 54572;54573 54573 TNILNSEQVIVEVLPNQPVK 20 1 0 Unmodified _TNILNSEQVIVEVLPNQPVK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1122.1299 2 1117.62318 2233.2318 59254.16 0.46224 0.00051661 -0.497 -0.00055546 -0.034764 -3.8853E-05 1118.12354836055 1122.13130765617 119.78 0.38374 119.78 119.6 119.99 0 114 27 6 0 0 0 1.641E-06 1 78968 72.891 72.891 1 1.2012 1.2131 0 16329000 6822600 9506200 34932 684 13240 13601 54574 54574 TNILNSEQVIVEVLPNQPVK 20 1 0 Unmodified _TNILNSEQVIVEVLPNQPVK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1118.125 2 1117.62318 2233.2318 59274.17 0.50058 0.00055947 -0.12803 -0.00014309 0.37256 0.00041638 1118.62574725788 1122.13134162415 133.04 0.45609 133.04 132.79 133.25 0 108 21 8 0 0 0 0.0050062 2 80925 28.812 28.812 1 1.5303 1.22 0 6818000 2772500 4045500 34933 684 13240 13601 54575;54576 54576 TNILNSEQVIVEVLPNQPVK 20 1 0 Unmodified _TNILNSEQVIVEVLPNQPVK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1122.1315 2 1117.62318 2233.2318 58712.02 0.67573 0.00075521 -0.14921 -0.00016676 0.52652 0.00058845 1118.12510173702 1122.13128546949 132.79 0.3746 132.79 132.59 132.97 0 81 16 7 0 0 0 0.024122 1 79839 22.855 22.855 1 1.5847 1.2978 0 8590200 3222400 5367800 34934 684 13240 13601 54577 54577 TNISEVNAATLLLGIENQHK 20 1 0 Unmodified _TNISEVNAATLLLGIENQHK_ 0 0 0 Q8IZT6;B3KWI2 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.3959 3 722.390208 2164.1488 73204.34 1.1709 0.00084585 -0.67869 -0.00049028 0.49222 0.00035558 722.389668267737 725.395095162271 128.12 0.78893 128.12 127.68 128.47 0 102 31 8 0 0 0 0.00018771 1 77281 36.246 36.246 1 2.0018 1.5965 0 6848000 2187600 4660400 34935 1902 13241 13602 54578 54578 TNISEVNAATLLLGIENQHK 20 1 0 Unmodified _TNISEVNAATLLLGIENQHK_ 0 0 0 Q8IZT6;B3KWI2 Q8IZT6 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.3906 3 722.390208 2164.1488 73982.12 0.86932 0.00062799 0.20402 0.00014738 1.0733 0.00077537 722.725012658812 725.395329057124 127.91 0.66293 127.91 127.5 128.16 7.6294E-06 77 27 7 0 0 0 0.0021852 1 76237 35.703 35.703 1 2.0858 1.7012 0 5844600 3660900 2183700 34936 1902 13241 13602 54579 54579 TNLANVVLLLK 11 1 0 Unmodified _TNLANVVLLLK_ 0 0 0 A8K6G9;Q92620;B4DM30;B4DET0;B4DN69 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.024 2 599.381906 1196.74926 80221.83 0.81721 0.00048982 -0.20823 -0.00012481 0.60897 0.00036501 599.381551860645 603.388670543698 120.23 0.52666 120.23 119.96 120.49 0 108 37 5 0 0 0 0.025025 1 77429 66.27 66.27 1 1.2268 1.2373 0 4861600 2752200 2109500 34937 760 13242 13603 54580 54580 TNLANVVLLLK 11 1 0 Unmodified _TNLANVVLLLK_ 0 0 0 A8K6G9;Q92620;B4DM30;B4DET0;B4DN69 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.3894 2 599.381906 1196.74926 80640.5 0.81961 0.00049126 -0.21909 -0.00013132 0.60052 0.00035994 599.381694735836 603.388838035089 119.62 0.45795 119.62 119.42 119.88 0 118 33 4 0 0 0 0.0015777 2 78798 66.435 58.509 1 1.2689 1.2729 0 6891500 2781100 4110300 34938 760 13242 13603 54581;54582 54581 TNLDESDVQPVK 12 1 0 Unmodified _TNLDESDVQPVK_ 0 0 0 Q9Y3I0;B4DNA0;B4DNG5 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.8451 2 672.835714 1343.65687 73822.32 0.84297 0.00056718 -0.058157 -3.913E-05 0.78482 0.00052805 672.835713466039 676.842693695545 43.637 0.6515 43.637 43.332 43.984 0 300 58 6 0 0 0 6.4735E-31 2 23348 175.64 154.26 1 1.1876 1.3352 0 70600000 29229000 41370000 34939 2137 13243 13604 54583;54584 54584 TNLDESDVQPVK 12 1 0 Unmodified _TNLDESDVQPVK_ 0 0 0 Q9Y3I0;B4DNA0;B4DNG5 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 676.8434 2 672.835714 1343.65687 74739.43 0.64573 0.00043447 0.11954 8.0433E-05 0.76527 0.0005149 672.835778902259 676.842838859141 42.944 0.63681 42.944 42.682 43.319 0 274 52 8 0 0 0 1.3174E-22 2 23173 154.24 129.39 1 1.1562 1.2988 0 117310000 53812000 63500000 34940 2137 13243 13604 54585;54586 54586 TNLDESDVQPVK 12 1 0 Unmodified _TNLDESDVQPVK_ 0 0 0 Q9Y3I0;B4DNA0;B4DNG5 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.8436 2 672.835714 1343.65687 74035.89 0.41452 0.0002789 0.63774 0.00042909 1.0523 0.000708 672.836022064045 676.843156597927 50.763 0.84746 50.763 50.43 51.277 0 293 57 8 0 0 0 1.0479E-05 1 24865 107.83 89.086 1 1.3063 1.0411 0 9709900 4349100 5360800 34941 2137 13243 13604 54587 54587 TNLDESDVQPVK 12 1 0 Unmodified _TNLDESDVQPVK_ 0 0 0 Q9Y3I0;B4DNA0;B4DNG5 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 676.8438 2 672.835714 1343.65687 74281.62 0.32535 0.0002189 0.21686 0.00014591 0.5422 0.00036481 672.835815704953 676.842909845254 51.22 0.83356 51.22 50.874 51.707 0 311 54 8 0 0 0 0.00020732 1 24516 80.24 69.088 1 1.1737 0.96076 0 8510400 3831800 4678600 34942 2137 13243 13604 54588 54588 TNLDLGPTAPSLEK 14 1 0 Unmodified _TNLDLGPTAPSLEK_ 0 0 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.3887 2 728.388113 1454.76167 72060.55 0.87033 0.00063394 -0.15106 -0.00011003 0.71927 0.00052391 728.388477045482 732.395107430161 81.869 0.56454 81.869 81.622 82.186 0 215 48 6 0 0 0 8.6699E-15 1 48786 135.15 124.23 1 0.73437 0.74372 0 27621000 15923000 11698000 34943 1680 13244 13605 54589 54589 TNLDLGPTAPSLEK 14 1 0 Unmodified _TNLDLGPTAPSLEK_ 0 0 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.3963 2 728.388113 1454.76167 71463.81 0.90986 0.00066273 0.45258 0.00032966 1.3624 0.00099239 728.388178706681 732.395381228939 80.958 0.62031 80.958 80.677 81.297 0 226 51 6 0 0 0 6.5668E-05 2 49406 90.697 77.263 1 0.72022 0.74668 0 33342000 17716000 15626000 34944 1680 13244 13605 54590;54591 54591 TNLDLGPTAPSLEK 14 1 0 Unmodified _TNLDLGPTAPSLEK_ 0 0 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.3954 2 728.388113 1454.76167 73214.61 0.71484 0.00052068 0.38117 0.00027764 1.096 0.00079832 728.388230352724 732.395158820795 93.848 0.75609 93.848 93.505 94.261 0 294 49 9 0 0 0 0.0060175 2 52378 42.789 42.789 1 1.7982 1.439 0 8701500 3017600 5683900 34945 1680 13244 13605 54592;54593 54592 TNLDLGPTAPSLEK 14 1 0 Unmodified _TNLDLGPTAPSLEK_ 0 0 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.3962 2 728.388113 1454.76167 73427.12 0.69431 0.00050573 0.33929 0.00024713 1.0336 0.00075286 728.388059615186 732.395077235963 93.764 0.8317 93.764 93.422 94.253 0 304 55 9 0 0 0 0.00021969 1 51502 66.538 66.538 1 1.9658 1.6083 0 8402500 2756900 5645700 34946 1680 13244 13605 54594 54594 TNLEDVGR 8 0 1 Unmodified _TNLEDVGR_ 0 0 0 E5KS95;P43897;B4DHY8 E5KS95 E5KS95 TSFM Elongation factor Ts, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.2347 2 452.230156 902.445759 NaN NaN NaN -1.2094 -0.00054694 NaN NaN NaN NaN 29.432 0.33086 29.432 29.231 29.562 0 0 0 0 0.012676 1 14222 73.26 39.522 1 NaN NaN 0 7661100 0 7661100 34947 1208 13245 13606 54595 54595 TNLEDVGR 8 0 1 Unmodified _TNLEDVGR_ 0 0 0 E5KS95;P43897;B4DHY8 E5KS95 E5KS95 TSFM Elongation factor Ts, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.235 2 452.230156 902.445759 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.95 1 28.95 28.45 29.45 1.9073E-06 0 0 0 0.028401 1 13869 63.673 29.935 1 34948 1208 13245 13606 54596 54596 TNLIVNYLPQNMTQDELR 18 0 1 Oxidation (M) _TNLIVNYLPQNM(ox)TQDELR_ TNLIVNYLPQNM(1)TQDELR TNLIVNYLPQNM(43.99)TQDELR 0 1 0 Q15717;M0QZR9 Q15717 Q15717 ELAVL1 ELAV-like protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1095.049 2 1089.54661 2177.07867 NaN NaN NaN 0.32249 0.00035137 NaN NaN NaN NaN 105.47 0.40914 105.47 105.25 105.66 0 0 0 0 0.0018751 1 65249 43.991 30.588 1 NaN NaN 0 4721600 0 4721600 34949 1764 13246 13607 54597 54597 1632 TNLLDELPQSVLK 13 1 0 Unmodified _TNLLDELPQSVLK_ 0 0 0 A8K9L2;Q05CR6;Q86Y07 A8K9L2 A8K9L2 VRK2 Serine/threonine-protein kinase VRK2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.4163 2 735.414131 1468.81371 73058.98 0.63869 0.0004697 0.54638 0.00040182 1.1851 0.00087152 735.414117024277 739.421381297319 117.82 0.42524 117.82 117.61 118.04 0 84 25 5 0 0 0 0.00028668 2 75478 66.289 52.936 1 0.5923 0.60058 0 6620800 3427000 3193800 34950 787 13247 13608 54598;54599 54599 TNLLDELPQSVLK 13 1 0 Unmodified _TNLLDELPQSVLK_ 0 0 0 A8K9L2;Q05CR6;Q86Y07 A8K9L2 A8K9L2 VRK2 Serine/threonine-protein kinase VRK2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.4144 2 735.414131 1468.81371 74451.75 0.65359 0.00048066 -0.19787 -0.00014552 0.45573 0.00033515 735.413582688412 739.42174354977 117.31 0.45192 117.31 117.08 117.53 -7.6294E-06 91 26 5 0 0 0 0.0066862 1 76885 45.915 37.334 1 0.54932 0.54583 0 5785000 3214900 2570100 34951 787 13247 13608 54600 54600 TNLLDELPQSVLK 13 1 0 Unmodified _TNLLDELPQSVLK_ 0 0 0 A8K9L2;Q05CR6;Q86Y07 A8K9L2 A8K9L2 VRK2 Serine/threonine-protein kinase VRK2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.4147 2 735.414131 1468.81371 74749.05 0.71738 0.00052757 -0.011955 -8.7916E-06 0.70542 0.00051878 735.414222700114 739.420865402688 129.99 0.40781 129.99 129.77 130.18 0 73 19 6 0 0 0 0.0082161 1 78728 44.188 38.343 1 0.68085 0.57068 0 1246200 741980 504170 34952 787 13247 13608 54601 54601 TNLLDELPQSVLK 13 1 0 Unmodified _TNLLDELPQSVLK_ 0 0 0 A8K9L2;Q05CR6;Q86Y07 A8K9L2 A8K9L2 VRK2 Serine/threonine-protein kinase VRK2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.4147 2 735.414131 1468.81371 72381.03 1.0646 0.00078289 0.039136 2.8781E-05 1.1037 0.00081167 735.413887126681 739.4212947683 129.78 0.41483 129.78 129.6 130.01 0 41 13 5 0 0 0 0.0067183 1 77701 45.879 40.156 1 0.74295 0.61526 0 1704400 975940 728500 34953 787 13247 13608 54602 54602 TNLLLQAHLSR 11 0 1 Unmodified _TNLLLQAHLSR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3711 2 633.369861 1264.72517 76911.54 0.44189 0.00027988 0.13208 8.3658E-05 0.57397 0.00036354 633.36999217573 638.373934415129 68.41 0.61143 68.41 68.104 68.715 0 165 52 5 0 0 0 0.00042272 2 39621 79.693 79.693 1 0.98344 1.0336 0 11244000 6179400 5064700 34954 1411 13248 13609 54603;54604 54604 TNLLLQAHLSR 11 0 1 Unmodified _TNLLLQAHLSR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.2502 3 422.582333 1264.72517 92845.65 0.020533 8.677E-06 0.20636 8.7205E-05 0.2269 9.5882E-05 422.582384390048 425.918366583212 68.502 0.84932 68.502 68.085 68.935 0 256 74 6 0 0 0 0.02998 1 39774 21.775 10.562 1 0.84804 0.86489 0 18704000 9089500 9615000 34955 1411 13248 13609 54605 54605 TNLLLQAHLSR 11 0 1 Unmodified _TNLLLQAHLSR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.5823 3 422.582333 1264.72517 94425.72 0.075581 3.1939E-05 0.12112 5.1184E-05 0.1967 8.3123E-05 422.582210099476 425.91833927631 66.653 0.53692 66.653 66.388 66.925 0 230 44 9 0 0 0 0.0014799 1 39341 48.659 48.659 1 0.92455 1.0244 0 42476000 23372000 19103000 34956 1411 13248 13609 54606 54606 TNLLLQAHLSR 11 0 1 Unmodified _TNLLLQAHLSR_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.369 2 633.369861 1264.72517 77767.94 0.61153 0.00038732 0.1072 6.7899E-05 0.71873 0.00045522 633.370124079682 638.373924869408 66.614 0.52595 66.614 66.388 66.914 0 170 43 6 0 0 0 0.00012356 2 39355 96.113 96.113 1 0.92718 0.98507 0 24113000 13603000 10509000 34957 1411 13248 13609 54607;54608 54607 TNLSAVVAAQSNWEK 15 1 0 Unmodified _TNLSAVVAAQSNWEK_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;D6RDY6;R4GNC1 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 813.4242 2 809.415194 1616.81583 68767.34 0.66292 0.00053658 0.37136 0.00030058 1.0343 0.00083716 809.415154151045 813.422763843643 99.239 0.47261 99.239 99.043 99.516 0 78 25 4 0 0 0 0.0020323 3 56041 46.069 46.069 1 1.3973 1.1743 0 1899100 630060 1269000 34958 1416 13249 13610 54609;54610;54611 54610 TNLSAVVAAQSNWEK 15 1 0 Unmodified _TNLSAVVAAQSNWEK_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;D6RDY6;R4GNC1 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 809.4161 2 809.415194 1616.81583 72550.3 0.58878 0.00047657 0.32641 0.0002642 0.91519 0.00074077 809.415004891728 813.422674640454 99.158 0.48393 99.158 98.914 99.398 0 85 28 4 0 0 0 0.010331 2 55157 34.96 34.96 1 1.2381 1.078 0 1335400 591110 744260 34959 1416 13249 13610 54612;54613 54613 TNLVWDEVSGQWR 13 0 1 Unmodified _TNLVWDEVSGQWR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 795.3887 2 795.388979 1588.76341 70379.87 0.79671 0.00063369 0.6176 0.00049123 1.4143 0.0011249 795.388716423153 800.39446631113 106.28 0.66725 106.28 105.95 106.62 0 220 47 6 0 0 0 0.00014979 4 65811 88.441 81.908 1 0.49083 0.51106 0 21149000 14579000 6569800 34960 1750 13250 13611 54614;54615;54616;54617 54614 TNLVWDEVSGQWR 13 0 1 Unmodified _TNLVWDEVSGQWR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.389 2 795.388979 1588.76341 69675.08 0.80895 0.00064343 0.293 0.00023305 1.1019 0.00087647 795.388415090738 800.39391371801 105.63 0.79936 105.63 105.23 106.03 0 262 57 7 0 0 0 0.00011507 2 66913 75.695 69.162 1 0.51613 0.56351 0 29994000 19121000 10873000 34961 1750 13250 13611 54618;54619 54618 TNLVWDEVSGQWR 13 0 1 Unmodified _TNLVWDEVSGQWR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.3887 2 795.388979 1588.76341 67964.06 0.67073 0.00053349 -0.28318 -0.00022524 0.38755 0.00030825 795.388826966264 800.393084217892 117.46 0.79616 117.46 117.18 117.98 0 184 36 9 0 0 0 0.0001617 1 69192 87.363 77.93 1 0.95202 0.77664 0 14802000 7644600 7157800 34962 1750 13250 13611 54620 54620 TNLVWDEVSGQWR 13 0 1 Unmodified _TNLVWDEVSGQWR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 800.3929 2 795.388979 1588.76341 68309.27 0.63103 0.00050191 -0.10603 -8.4339E-05 0.52499 0.00041757 795.890438658613 800.393149687688 117.31 0.59091 117.31 117.05 117.64 0 144 27 8 0 0 0 0.00020025 3 68225 70.488 63.955 1 1.0513 0.84723 0 11138000 5528300 5610100 34963 1750 13250 13611 54621;54622;54623 54622 TNNFNVETLK 10 1 0 Unmodified _TNNFNVETLK_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255;A0A024RAU5;P54840 P13807 P13807 GYS1;GYS2 Glycogen [starch] synthase, muscle;Glycogen [starch] synthase, liver ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.3115 2 590.303852 1178.59315 NaN NaN NaN 0.5013 0.00029592 NaN NaN NaN NaN 58.191 0.39193 58.191 58.002 58.393 0 0 0 0 8.9186E-06 1 33730 104.89 79.945 1 NaN NaN 0 21987000 0 21987000 34964 1479 13251 13612 54624 54624 TNNFNVETLK 10 1 0 Unmodified _TNNFNVETLK_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255;A0A024RAU5;P54840 P13807 P13807 GYS1;GYS2 Glycogen [starch] synthase, muscle;Glycogen [starch] synthase, liver ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.3053 2 590.303852 1178.59315 NaN NaN NaN -0.045875 -2.708E-05 NaN NaN NaN NaN 57.784 1.1889 57.784 57.399 58.588 0 0 0 0 0.00012461 1 33826 94.409 2.2081 1 NaN NaN 0 1148200000 1148200000 0 34965 1479 13251 13612 54625 54625 TNNFNVETLK 10 1 0 Unmodified _TNNFNVETLK_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255;A0A024RAU5;P54840 P13807 P13807 GYS1;GYS2 Glycogen [starch] synthase, muscle;Glycogen [starch] synthase, liver MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.3128 2 590.303852 1178.59315 77537.91 0.41846 0.00024702 0.23033 0.00013597 0.64879 0.00038298 590.303880287663 594.311102628739 68.944 1.0925 68.944 68.554 69.647 7.6294E-06 337 78 8 0 0 0 0.012689 1 36000 50.292 50.292 1 0.38561 0.3124 0 24371000 17226000 7145700 34966 1479 13251 13612 54626 54626 TNNFNVETLK 10 1 0 Unmodified _TNNFNVETLK_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255;A0A024RAU5;P54840 P13807 P13807 GYS1;GYS2 Glycogen [starch] synthase, muscle;Glycogen [starch] synthase, liver MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.3116 2 590.303852 1178.59315 78657.27 0.52787 0.00031161 0.078218 4.6172E-05 0.60609 0.00035778 590.303814744087 594.31095900781 69.412 1.1572 69.412 69.042 70.199 0 371 86 9 0 0 0 0.000817 1 35530 80.755 80.755 1 0.34904 0.27982 0 19367000 14171000 5195200 34967 1479 13251 13612 54627 54627 TNNFSAFLANVR 12 0 1 Unmodified _TNNFSAFLANVR_ 0 0 0 Q9HBM1 Q9HBM1 Q9HBM1 SPC25 Kinetochore protein Spc25 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.3474 2 677.349126 1352.6837 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.22 1 102.22 101.72 102.72 0 0 0 0 0.0062561 1 64478 62.303 45.671 1 34968 2050 13252 13613 54628 54628 TNPEYIYAPLK 11 1 0 Unmodified _TNPEYIYAPLK_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829;A2I831 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.8453 2 654.845353 1307.67615 77766.38 0.52525 0.00034396 0.3549 0.0002324 0.88015 0.00057637 654.845596627215 658.852366141645 91.612 0.74081 91.612 91.409 92.15 0 167 47 5 0 0 0 0.03834 1 50081 44.203 35.671 1 0.7368 0.58816 0 3081400 1892100 1189400 34969 655 13253 13614 54629 54629 TNPPLIQEK 9 1 0 Unmodified _TNPPLIQEK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.3003 2 520.292756 1038.57096 84231.41 0.25281 0.00013154 -0.26217 -0.00013641 -0.009361 -4.8705E-06 520.292122215075 524.29977680692 38.714 0.61263 38.714 38.408 39.021 0 183 52 5 0 0 0 0.0021841 1 20324 75.696 61.181 1 2.2267 2.292 0 32436000 10961000 21474000 34970 1054 13254 13615 54630 54630 TNQEHAALEAENSK 14 1 0 Unmodified _TNQEHAALEAENSK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 775.3707 2 771.363158 1540.71176 69749.7 0.24155 0.00018632 1.037 0.00079989 1.2785 0.00098621 771.362766288372 775.370139706529 19.136 0.30427 19.136 19.019 19.324 0 73 19 6 0 0 0 0.045857 1 4930 26.648 26.648 1 1.5161 1.2656 0 1799600 721510 1078100 34971 1581 13255 13616 54631 54631 TNQEHAALEAENSK 14 1 0 Unmodified _TNQEHAALEAENSK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.8772 2 771.363158 1540.71176 NaN NaN NaN 2.5281 0.0019501 NaN NaN NaN NaN 19.085 0.20439 19.085 18.987 19.191 -1.9073E-06 0 0 0 0.041532 1 4444 39.947 33.258 1 NaN NaN 0 1084000 0 1084000 34972 1581 13255 13616 54632 54632 TNQELQEINR 10 0 1 Unmodified _TNQELQEINR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1;H0YN52;H0YLE2 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.8193 2 622.815116 1243.61568 76965.06 0.84135 0.00052401 -0.40001 -0.00024913 0.44134 0.00027487 622.814282332727 627.819336019043 32.229 1.0088 32.229 31.598 32.607 0 245 87 5 0 0 0 1.7051E-06 3 15920 111.46 88.027 1 0.95309 0.97477 0 18993000 9071600 9921600 34973 193 13256 13617 54633;54634;54635 54633 TNQELQEINR 10 0 1 Unmodified _TNQELQEINR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1;H0YN52;H0YLE2 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8151 2 622.815116 1243.61568 NaN NaN NaN -0.75752 -0.00047179 NaN NaN NaN NaN 31.528 0.62812 31.528 31.295 31.923 0 0 0 0 4.4715E-05 1 15662 101.65 65.251 1 NaN NaN 0 6380800 6380800 0 34974 193 13256 13617 54636 54636 TNQELQEINR 10 0 1 Unmodified _TNQELQEINR_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YNA0;H0YN28;H0YL33;B3KRQ1;H0YN52;H0YLE2 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.8152 2 622.815116 1243.61568 77058.68 0.4839 0.00030138 0.045368 2.8256E-05 0.52927 0.00032964 622.815017574175 627.819284602784 37.54 0.73164 37.54 37.169 37.901 0 140 55 5 0 0 0 0.036003 1 16889 40.386 20.396 1 0.44452 0.38006 0 2763500 1536900 1226500 34975 193 13256 13617 54637 54637 TNRPFISQK 9 1 1 Unmodified _TNRPFISQK_ 0 0 1 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 364.205 3 364.204974 1089.59309 99618.84 0.16291 5.9333E-05 0.087081 3.1715E-05 0.24999 9.1049E-05 364.204913705913 370.212417525136 21.305 0.28026 21.305 21.127 21.408 0 46 12 6 0 0 0 0.018179 1 7415 34.803 26.973 1 1.0722 1.2234 0 20489000 10244000 10246000 34976 1407 13257 13618 54638 54638 TNRPFISQK 9 1 1 Unmodified _TNRPFISQK_ 0 0 1 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.8043 2 545.803823 1089.59309 NaN NaN NaN 0.41382 0.00022586 NaN NaN NaN NaN 21.308 0.24419 21.308 21.163 21.408 0 0 0 0 4.0814E-23 1 7426 158.37 158.37 1 NaN NaN 0 21504000 21504000 0 34977 1407 13257 13618 54639 54639 TNRPFISQK 9 1 1 Unmodified _TNRPFISQK_ 0 0 1 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.8163 2 545.803823 1089.59309 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.227 1 21.227 20.727 21.727 -1.9073E-06 0 0 0 0.011094 1 7400 76.1 33.501 1 34978 1407 13257 13618 54640 54640 TNRPFISQK 9 1 1 Unmodified _TNRPFISQK_ 0 0 1 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.8154 2 545.803823 1089.59309 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.316 1 21.316 20.816 21.816 0 0 0 0 0.0074381 1 7473 87.895 37.855 1 34979 1407 13257 13618 54641 54641 TNRPFISQK 9 1 1 Unmodified _TNRPFISQK_ 0 0 1 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.8156 2 545.803823 1089.59309 80201.18 0.22436 0.00012246 0.24086 0.00013146 0.46522 0.00025392 545.803955517801 554.815127552968 22.963 0.41059 22.963 22.778 23.189 0 75 16 8 0 0 0 0.017518 1 7561 72.275 72.275 1 1.9297 1.6498 0 10168000 3317600 6850700 34980 1407 13257 13618 54642 54642 TNRPFISQK 9 1 1 Unmodified _TNRPFISQK_ 0 0 1 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.8151 2 545.803823 1089.59309 80165.09 0.28327 0.00015461 -0.075808 -4.1377E-05 0.20746 0.00011324 545.803949649915 554.815026639135 22.807 0.4078 22.807 22.595 23.003 0 76 15 8 0 0 0 0.016129 1 7018 72.928 72.928 1 1.8402 1.5524 0 8790000 2940700 5849300 34981 1407 13257 13618 54643 54643 TNRPPLSLSR 10 0 2 Unmodified _TNRPPLSLSR_ 0 0 1 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 380.8876 3 380.887645 1139.64111 95290.14 0.069635 2.6523E-05 -0.13697 -5.217E-05 -0.067334 -2.5647E-05 380.887637022183 387.55976797989 34.854 1.3607 34.854 34.294 35.655 0 580 118 8 0 0 0 0.00010932 2 17327 92.866 78.187 1 0.91194 0.99956 0 698890000 378210000 320680000 34982 16 13258 13619 54644;54645 54645 TNRPPLSLSR 10 0 2 Unmodified _TNRPPLSLSR_ 0 0 1 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.8362 2 570.827829 1139.64111 79188.59 0.54129 0.00030898 0.12402 7.0796E-05 0.66532 0.00037978 570.827803529708 580.836086901489 34.872 1.0581 34.872 34.374 35.432 0 514 91 8 0 0 0 0.03677 1 17376 50.108 25.185 1 0.84219 0.92209 0 483260000 267610000 215650000 34983 16 13258 13619 54646 54646 TNRPPLSLSR 10 0 2 Unmodified _TNRPPLSLSR_ 0 0 1 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.8279 2 570.827829 1139.64111 79662.39 0.54147 0.00030909 -0.034335 -1.96E-05 0.50714 0.00028949 570.827794446881 580.836061157794 33.655 0.78255 33.655 33.417 34.2 0 365 61 9 0 0 0 2.054E-07 2 16844 96.665 57.643 1 0.95427 1.1864 0 1203300000 589670000 613640000 34984 16 13258 13619 54647;54648 54648 TNRPPLSLSR 10 0 2 Unmodified _TNRPPLSLSR_ 0 0 1 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 380.8874 3 380.887645 1139.64111 94963.89 0.13686 5.213E-05 -0.28555 -0.00010876 -0.14868 -5.6631E-05 380.887624632862 387.559773069297 33.663 0.90621 33.663 33.417 34.323 0 454 69 10 0 0 0 5.2846E-06 2 16815 104.14 82.772 1 0.97543 1.2202 0 1527800000 750660000 777140000 34985 16 13258 13619 54649;54650 54649 TNRPPLSLSR 10 0 2 Unmodified _TNRPPLSLSR_ 0 0 1 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 387.5597 3 380.887645 1139.64111 94234.92 -0.14921 -5.6831E-05 -0.039507 -1.5048E-05 -0.18871 -7.1879E-05 380.887652400456 387.559781466675 39.106 1.0192 39.106 38.777 39.797 0 451 79 8 0 0 0 0.025392 1 17240 35.594 32.254 1 0.8757 0.82402 0 60927000 32940000 27986000 34986 16 13258 13619 54651 54651 TNRPPLSLSR 10 0 2 Unmodified _TNRPPLSLSR_ 0 0 1 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0;F8VUA6 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.8282 2 570.827829 1139.64111 77772.39 0.21532 0.00012291 0.27013 0.0001542 0.48545 0.00027711 570.827812631822 580.83624419632 39.094 1.0428 39.094 38.765 39.808 0 413 81 8 0 0 0 0.021338 1 17272 50.034 34.883 1 0.90918 0.84977 0 39278000 20860000 18418000 34987 16 13258 13619 54652 54652 TNSQFLSGPQK 11 1 0 Unmodified _TNSQFLSGPQK_ 0 0 0 A8K0P8;Q68CQ4 A8K0P8 A8K0P8 DIEXF Digestive organ expansion factor homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.8101 2 603.809302 1205.60405 82065.55 0.64388 0.00038878 0.33621 0.00020301 0.9801 0.00059179 603.809680281638 607.816376663868 36.62 0.38835 36.62 36.429 36.817 -3.8147E-06 93 35 4 0 0 0 0.01237 1 18539 47.894 47.894 1 0.77447 0.76556 0 8382100 4611300 3770900 34988 699 13259 13620 54653 54653 TNSQFLSGPQK 11 1 0 Unmodified _TNSQFLSGPQK_ 0 0 0 A8K0P8;Q68CQ4 A8K0P8 A8K0P8 DIEXF Digestive organ expansion factor homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.8107 2 603.809302 1205.60405 80455.89 0.87889 0.00053068 -0.046528 -2.8094E-05 0.83236 0.00050259 603.809206899219 607.816377561675 35.763 0.41103 35.763 35.602 36.013 0 101 32 4 0 0 0 7.8874E-05 1 18303 98.048 98.048 1 0.72887 0.7434 0 12103000 5908400 6194800 34989 699 13259 13620 54654 54654 TNSTFNQVVLK 11 1 0 Unmodified _TNSTFNQVVLK_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.8414 2 625.840602 1249.66665 76190.77 0.37174 0.00023265 0.18005 0.00011268 0.55179 0.00034533 625.840748184578 629.847697294681 64.713 1.9988 64.713 64.065 66.064 0 1020 167 10 0 0 0 2.383E-12 4 36992 140.11 128.38 1 0.97366 1.1604 0 674760000 343200000 331560000 34990 16 13260 13621 54655;54656;54657;54658 54655 TNSTFNQVVLK 11 1 0 Unmodified _TNSTFNQVVLK_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.8483 2 625.840602 1249.66665 76454.84 0.63551 0.00039773 0.033212 2.0786E-05 0.66872 0.00041851 625.840711839254 629.847551003731 63.42 1.8924 63.42 62.905 64.798 -3.8147E-06 1014 169 10 0 0 0 7.5655E-10 5 37585 126.07 126.07 1 0.92409 1.0893 0 654470000 327970000 326500000 34991 16 13260 13621 54659;54660;54661;54662;54663 54662 TNSTFNQVVLK 11 1 0 Unmodified _TNSTFNQVVLK_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.8477 2 625.840602 1249.66665 76831.43 0.66078 0.00041354 0.041818 2.6172E-05 0.7026 0.00043971 625.840635958171 629.847591044121 74.608 1.7517 74.608 73.986 75.738 0 801 123 11 0 0 0 0.00038966 3 39389 82.287 82.287 1 0.92012 0.78888 0 77698000 40455000 37242000 34992 16 13260 13621 54664;54665;54666 54665 TNSTFNQVVLK 11 1 0 Unmodified _TNSTFNQVVLK_ 0 0 0 G3V203;A0A024QZD1;J3QQ67;Q07020;Q0QEW2;H0YHA7;F8VYV2;B4DDY5;A0A075B7A0 G3V203 G3V203 RPL18 60S ribosomal protein L18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.8407 2 625.840602 1249.66665 76230.7 0.46234 0.00028935 0.066423 4.157E-05 0.52876 0.00033092 625.840654323158 629.847578844972 74.946 1.6843 74.946 74.372 76.057 0 713 112 11 0 0 0 0.00077159 3 39235 72.607 64.297 1 0.9117 0.77292 0 64671000 33675000 30996000 34993 16 13260 13621 54667;54668;54669 54669 TNTLAVTGGEDDK 13 1 0 Unmodified _TNTLAVTGGEDDK_ 0 0 0 C9JTS3;Q59EM1;C9JG97;A0A024R410;C9JEH3;Q13685 C9JTS3 C9JTS3 AAMP Angio-associated migratory cell protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8247 2 660.817521 1319.62049 NaN NaN NaN 0.19598 0.00012951 NaN NaN NaN NaN 31.483 0.16867 31.483 31.408 31.577 0 0 0 0 0.0060891 1 15577 55.261 44.738 1 NaN NaN 0 4319400 0 4319400 34994 145 13261 13622 54670 54670 TNVLGHLQQGGAPTPFDR 18 0 1 Unmodified _TNVLGHLQQGGAPTPFDR_ 0 0 0 P17858;Q7L2M7;Q9BSP4;B3KNQ7 P17858 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.9986 3 636.662263 1906.96496 76060.42 0.62934 0.00040068 0.15809 0.00010065 0.78744 0.00050133 636.996519145384 639.998673770532 77.942 0.54555 77.942 77.65 78.195 0 193 46 5 0 0 0 9.4568E-13 2 47155 86.539 70.233 1 1.128 1.2317 0 38824000 18444000 20381000 34995 1495 13262 13623 54671;54672 54672 TNVLGHLQQGGAPTPFDR 18 0 1 Unmodified _TNVLGHLQQGGAPTPFDR_ 0 0 0 P17858;Q7L2M7;Q9BSP4;B3KNQ7 P17858 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.9986 3 636.662263 1906.96496 77348.18 0.59686 0.00038 0.073482 4.6783E-05 0.67034 0.00042678 636.662221284231 640.332445584743 90.538 0.48566 90.538 90.307 90.793 0 108 28 5 0 0 0 0.004125 1 50175 24.91 21.306 1 0.69746 0.5827 0 3338300 2111200 1227000 34996 1495 13262 13623 54673 54673 TNVLGHLQQGGAPTPFDR 18 0 1 Unmodified _TNVLGHLQQGGAPTPFDR_ 0 0 0 P17858;Q7L2M7;Q9BSP4;B3KNQ7 P17858 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.3324 3 636.662263 1906.96496 77919.52 0.44874 0.0002857 -0.1659 -0.00010562 0.28284 0.00018007 636.996459390141 640.332572826472 90.29 0.43991 90.29 90.081 90.521 -7.6294E-06 102 30 4 0 0 0 0.023122 1 49192 14.928 11.324 1 0.65581 0.57785 0 3642700 2159100 1483500 34997 1495 13262 13623 54674 54674 TNVVTMPTAHPR 12 0 1 Oxidation (M) _TNVVTM(ox)PTAHPR_ TNVVTM(1)PTAHPR TNVVTM(75.57)PTAHPR 0 1 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.8447 2 670.342986 1338.67142 73539.23 0.78999 0.00052957 -0.061479 -4.1212E-05 0.72851 0.00048835 670.342684864847 675.347281010179 21.571 0.36206 21.571 21.422 21.784 0 102 20 6 0 0 0 8.9287E-05 1 7826 75.566 71.115 1 0.90498 0.92346 0 30790000 15965000 14825000 34998 1712;1225 13263 13624 54675 54675 937 TNVVTMPTAHPR 12 0 1 Oxidation (M) _TNVVTM(ox)PTAHPR_ TNVVTM(1)PTAHPR TNVVTM(80.78)PTAHPR 0 1 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.3433 2 670.342986 1338.67142 72637.8 0.39745 0.00026643 -0.15536 -0.00010415 0.24209 0.00016228 670.342728941224 675.347086940324 21.356 0.38146 21.356 21.225 21.607 0 66 16 6 0 0 0 0.00010174 1 7500 80.782 75.954 1 1.1652 1.2545 0 25811000 12286000 13525000 34999 1712;1225 13263 13624 54676 54676 937 TNVVTMPTAHPR 12 0 1 Oxidation (M) _TNVVTM(ox)PTAHPR_ TNVVTM(1)PTAHPR TNVVTM(49.42)PTAHPR 0 1 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.5674 3 447.231083 1338.67142 89350.67 -0.11452 -5.1215E-05 -0.36645 -0.00016389 -0.48097 -0.0002151 447.231078896069 450.567028429706 21.384 0.43986 21.384 21.203 21.643 0 95 19 7 0 0 0 0.0015606 1 7593 49.423 40.602 1 0.87212 0.95313 0 36527000 18426000 18100000 35000 1712;1225 13263 13624 54677 54677 937 TNYDIVVR 8 0 1 Unmodified _TNYDIVVR_ 0 0 0 Q15397 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2683 2 490.263999 978.513445 86001.47 0.006901 3.3833E-06 0.51068 0.00025037 0.51758 0.00025375 490.264060090212 495.268324744062 64.803 0.92765 64.803 64.38 65.308 0 326 74 6 0 0 0 0.04994 1 32756 43.769 26.384 1 0.97183 0.80694 0 5067300 2521100 2546200 35001 1761 13264 13625 54678 54678 TNYNDRYDEIR 11 0 2 Unmodified _TNYNDRYDEIR_ 0 0 1 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 486.8919 3 486.891783 1457.65352 85322.79 0.29126 0.00014181 0.15983 7.782E-05 0.45109 0.00021963 486.891778144644 493.563999979999 28.812 0.94384 28.812 28.572 29.516 0 244 58 8 0 0 0 0.00016814 1 13701 84.289 76.745 1 0.83133 0.906 0 104160000 56234000 47929000 35002 1648 13265 13626 54679 54679 TNYNDRYDEIR 11 0 2 Unmodified _TNYNDRYDEIR_ 0 0 1 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.8431 2 729.834037 1457.65352 70799.94 0.59443 0.00043383 0.25872 0.00018882 0.85314 0.00062265 729.834256150827 739.84253240212 28.045 0.59223 28.045 27.835 28.428 -1.9073E-06 142 33 7 0 0 0 0.010413 2 13174 73.067 47.681 1 0.82884 0.9502 0 50870000 28037000 22833000 35003 1648 13265 13626 54680;54681 54681 TNYNDRYDEIR 11 0 2 Unmodified _TNYNDRYDEIR_ 0 0 1 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 486.8918 3 486.891783 1457.65352 86175.52 0.25172 0.00012256 -0.074884 -3.646E-05 0.17684 8.6102E-05 486.891647833036 493.563869893262 28.009 1.0225 28.009 27.818 28.84 0 273 74 8 0 0 0 0.00015218 2 13169 87.001 81.685 1 0.84157 0.98363 0 108190000 60897000 47294000 35004 1648 13265 13626 54682;54683 54682 TPAAAAAMNLASPR 14 0 1 Oxidation (M) _TPAAAAAM(ox)NLASPR_ TPAAAAAM(1)NLASPR TPAAAAAM(58.67)NLASPR 0 1 0 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3522 2 679.348268 1356.68198 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.781 1 44.781 44.281 45.281 3.8147E-06 0 0 0 0.0013254 1 24081 58.674 43.012 1 35005 619 13266 13627 54684 54684 477 TPAAAAAMNLASPR 14 0 1 Oxidation (M) _TPAAAAAM(ox)NLASPR_ TPAAAAAM(1)NLASPR TPAAAAAM(109.72)NLASPR 0 1 0 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.355 2 679.348268 1356.68198 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.02 1 44.02 43.52 44.52 0 0 0 0 6.6394E-11 1 24001 109.72 86.981 1 35006 619 13266 13627 54685 54685 477 TPAAAAAMNLASPR 14 0 1 Oxidation (M) _TPAAAAAM(ox)NLASPR_ TPAAAAAM(1)NLASPR TPAAAAAM(60.51)NLASPR 0 1 0 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3486 2 679.348268 1356.68198 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.112 1 44.112 43.612 44.612 0 0 0 0 0.00124 1 24057 60.509 46.69 1 35007 619 13266 13627 54686 54686 477 TPAEVVSTCDITFACVSDPK 20 1 0 Unmodified _TPAEVVSTCDITFACVSDPK_ 0 0 0 D3DUE6;K7EMM8;K7EK70;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1103.0159 2 1099.01121 2196.00787 58688.44 0.23574 0.00025908 -0.12082 -0.00013278 0.11492 0.0001263 1099.51277573789 1103.51964932848 101.44 0.57771 101.44 101.16 101.73 7.6294E-06 194 43 7 0 0 0 2.1946E-06 3 62429 68.83 67.512 1 1.0144 1.0731 0 16251000 8386700 7863900 35008 1194;1193 13267 13628 54687;54688;54689 54689 TPAEVVSTCDITFACVSDPK 20 1 0 Unmodified _TPAEVVSTCDITFACVSDPK_ 0 0 0 D3DUE6;K7EMM8;K7EK70;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1099.0122 2 1099.01121 2196.00787 59247.79 -0.037502 -4.1215E-05 0.077011 8.4636E-05 0.039509 4.3421E-05 1099.51309559618 1103.52021736964 100.81 0.48945 100.81 100.57 101.06 0 197 37 7 0 0 0 4.3399E-06 2 63258 77.078 77.078 1 1.1594 1.1712 0 16343000 7940000 8403300 35009 1194;1193 13267 13628 54690;54691 54691 TPAEVVSTCDITFACVSDPK 20 1 0 Unmodified _TPAEVVSTCDITFACVSDPK_ 0 0 0 D3DUE6;K7EMM8;K7EK70;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1103.0184 2 1099.01121 2196.00787 57273.39 0.52465 0.0005766 -0.10878 -0.00011955 0.41587 0.00045705 1099.51309698769 1103.51976561057 113.7 0.73232 113.7 113.43 114.16 -7.6294E-06 189 33 10 0 0 0 6.7403E-07 2 66177 81.311 76.509 1 1.9771 1.5751 0 19729000 6721500 13008000 35010 1194;1193 13267 13628 54692;54693 54692 TPAEVVSTCDITFACVSDPK 20 1 0 Unmodified _TPAEVVSTCDITFACVSDPK_ 0 0 0 D3DUE6;K7EMM8;K7EK70;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1099.5122 2 1099.01121 2196.00787 57289.18 0.17129 0.00018825 -0.13471 -0.00014805 0.036576 4.0198E-05 1099.0112180934 1103.52002784492 113.6 0.72237 113.6 113.33 114.05 -7.6294E-06 211 33 10 0 0 0 0.00016933 1 65234 56.46 53.897 1 2.0583 1.6499 0 21854000 7089800 14764000 35011 1194;1193 13267 13628 54694 54694 TPAFSPFVR 9 0 1 Unmodified _TPAFSPFVR_ 0 0 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.2817 2 511.276909 1020.53927 NaN NaN NaN 0.070638 3.6115E-05 NaN NaN NaN NaN 93.988 0.56459 93.988 93.673 94.238 -7.6294E-06 0 0 0 0.040651 1 51628 50.04 26.612 1 NaN NaN 0 930020 0 930020 35012 1879 13268 13629 54695 54695 TPAIPTAVNLADSR 14 0 1 Unmodified _TPAIPTAVNLADSR_ 0 0 0 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.3932 2 713.388448 1424.76234 NaN NaN NaN -0.95539 -0.00068157 NaN NaN NaN NaN 86.223 0.4853 86.223 86.061 86.546 0 0 0 0 0.0013412 1 51845 71.888 47.035 1 NaN NaN 0 17785000 0 17785000 35013 619 13269 13630 54696 54696 TPAIPTAVNLADSR 14 0 1 Unmodified _TPAIPTAVNLADSR_ 0 0 0 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.3929 2 713.388448 1424.76234 NaN NaN NaN -0.25026 -0.00017853 NaN NaN NaN NaN 85.409 0.61172 85.409 85.159 85.77 0 0 0 0 0.005134 1 52400 56.225 43.27 1 NaN NaN 0 15135000 0 15135000 35014 619 13269 13630 54697 54697 TPALISDYK 9 1 0 Unmodified _TPALISDYK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.2738 2 504.274032 1006.53351 83581.46 0.47876 0.00024142 -0.15648 -7.8909E-05 0.32227 0.00016251 504.273817179298 508.281610245474 57.375 0.85742 57.375 57.022 57.879 0 296 64 9 0 0 0 6.2749E-05 2 32315 111.39 61.95 1 0.55136 0.60251 0 51092000 31468000 19624000 35015 1679 13270 13631 54698;54699 54698 TPALISDYK 9 1 0 Unmodified _TPALISDYK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.2811 2 504.274032 1006.53351 82482.37 0.1853 9.3442E-05 -0.50851 -0.00025643 -0.32321 -0.00016299 504.273827273621 508.280675342394 56.375 0.98756 56.375 55.841 56.828 0 261 76 5 0 0 0 0.00089636 2 32311 92.838 45.756 1 0.62756 0.70758 0 61668000 39108000 22560000 35016 1679 13270 13631 54700;54701 54701 TPALISDYK 9 1 0 Unmodified _TPALISDYK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 508.2813 2 504.274032 1006.53351 84658.94 0.45716 0.00023053 0.00041503 2.0929E-07 0.45757 0.00023074 504.273841291605 508.281271892525 66.422 0.84942 66.422 66.012 66.861 0 248 47 9 0 0 0 0.0019956 2 34314 78.149 42.704 1 0.97185 0.76432 0 11130000 5199200 5930500 35017 1679 13270 13631 54702;54703 54702 TPALISDYK 9 1 0 Unmodified _TPALISDYK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80;Q6W6M6 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.2741 2 504.274032 1006.53351 85978.5 0.23064 0.0001163 -0.08523 -4.298E-05 0.14541 7.3324E-05 504.273908375036 508.281201268745 66.795 1.0844 66.795 66.301 67.385 0 299 65 9 0 0 0 0.0027373 2 33818 73.573 32.544 1 1.1357 0.92957 0 8480100 3735800 4744300 35018 1679 13270 13631 54704;54705 54705 TPAQYDASELK 11 1 0 Unmodified _TPAQYDASELK_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.8112 2 611.801143 1221.58773 NaN NaN NaN -0.12043 -7.3677E-05 NaN NaN NaN NaN 38.171 0.46071 38.171 37.908 38.369 0 0 0 0 5.8115E-05 1 19507 98.156 77.827 1 NaN NaN 0 16931000 0 16931000 35019 193 13271 13632 54706 54706 TPAQYDASELK 11 1 0 Unmodified _TPAQYDASELK_ 0 0 0 V9HW65;A0A024R5Z7;P07355;H0YMD0;H0YMU9;H0YN42;H0YKS4;B4DNH8;H0YMM1;H0YM50;A6NMY6;H0YNP5;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4 V9HW65 V9HW65 HEL-S-270;ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.8086 2 611.801143 1221.58773 76532.3 0.2921 0.00017871 -1.59 -0.00097278 -1.2979 -0.00079407 611.801244249211 615.808331032868 37.277 0.51354 37.277 36.982 37.496 0 189 43 7 0 0 0 0.0011047 1 19273 70.056 57.02 1 1.1783 1.2838 0 39867000 17615000 22253000 35020 193 13271 13632 54707 54707 TPASINATPANINLADLTR 19 0 1 Unmodified _TPASINATPANINLADLTR_ 0 0 0 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 977.022 2 977.023628 1952.0327 63495.43 0.53836 0.00052599 -0.0072954 -7.1277E-06 0.53106 0.00051886 977.023815825023 982.027054092075 109.28 0.27773 109.28 109.17 109.45 0 59 18 4 0 0 0 1.3424E-05 1 68402 69.345 69.345 1 1.0964 1.1444 0 10557000 4935400 5621900 35021 1870 13272 13633 54708 54708 TPASINATPANINLADLTR 19 0 1 Unmodified _TPASINATPANINLADLTR_ 0 0 0 Q7KZ85 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.5275 2 977.023628 1952.0327 64741.23 0.3207 0.00031333 0.20194 0.0001973 0.52264 0.00051063 977.525759625552 982.027115213141 108.81 0.30779 108.81 108.63 108.94 0 70 22 5 0 0 0 0.00036655 1 69726 42.785 42.785 1 1.2722 1.2561 0 12760000 4979200 7780600 35022 1870 13272 13633 54709 54709 TPASPVVHIR 10 0 1 Unmodified _TPASPVVHIR_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0R1W6;M0QYL7 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 359.5449 3 359.545219 1075.61383 99990.2 0.098651 3.5469E-05 -1.7578 -0.00063202 -1.6592 -0.00059655 359.545245857958 362.881231433262 36.649 0.44021 36.649 36.441 36.881 3.8147E-06 206 40 9 0 0 0 0.00011226 2 18574 88.681 75.725 1 1.5898 1.8298 0 146720000 58729000 87993000 35023 865 13273 13634 54710;54711 54711 TPATAPVPAR 10 0 1 Unmodified _TPATAPVPAR_ 0 0 0 F5H8D7;A0A024R0S8;Q59HH7;P18887;B4DEB2 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.7799 2 490.779816 979.545079 82781.34 0.22827 0.00011203 -1.1242 -0.00055172 -0.89591 -0.00043969 490.77974601377 495.783981913869 27.7 0.42328 27.7 27.538 27.961 0 93 27 6 0 0 0 2.966E-09 1 12825 125.31 94.702 1 0.57742 0.61009 0 40493000 22626000 17867000 35024 58 13274 13635 54712 54712 TPATAPVPAR 10 0 1 Unmodified _TPATAPVPAR_ 0 0 0 F5H8D7;A0A024R0S8;Q59HH7;P18887;B4DEB2 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 490.7796 2 490.779816 979.545079 NaN NaN NaN -2.5773 -0.0012649 NaN NaN NaN NaN 30.894 0.44697 30.894 30.691 31.138 -1.9073E-06 0 0 0 0.053954 1 12956 45.74 18.486 1 NaN NaN 0 1042900 1042900 0 35025 58 13274 13635 54713 54713 TPCEEILVK 9 1 0 Unmodified _TPCEEILVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 P21333 P21333 FLNA;FLJ00119 Filamin-A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.7947 2 544.78645 1087.55835 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.326 1 53.326 52.826 53.826 0 0 0 0 0.050344 1 30504 46.462 26.675 1 35026 1504 13275 13636 54714 54714 TPCNAGTFSQPEK 13 1 0 Unmodified _TPCNAGTFSQPEK_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6;J3QSX4 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.8279 2 718.827366 1435.64018 71927.63 0.84402 0.0006067 -0.12155 -8.737E-05 0.72247 0.00051933 718.827120425416 722.834486889794 28.248 0.27519 28.248 28.144 28.419 0 85 18 7 0 0 0 1.5209E-61 3 13260 257.75 248.7 1 0.87438 0.87784 0 26910000 13780000 13131000 35027 600 13276 13637 54715;54716;54717 54717 TPCNAGTFSQPEK 13 1 0 Unmodified _TPCNAGTFSQPEK_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6;J3QSX4 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.8251 2 718.827366 1435.64018 72114.63 0.32474 0.00023343 -0.74431 -0.00053503 -0.41958 -0.0003016 718.826851469283 722.833977099735 27.637 0.2543 27.637 27.483 27.737 1.9073E-06 73 13 7 0 0 0 4.2067E-24 2 12845 183.37 177.41 1 0.88574 0.99718 0 57363000 29012000 28350000 35028 600 13276 13637 54718;54719 54719 TPCNAGTFSQPEK 13 1 0 Unmodified _TPCNAGTFSQPEK_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6;J3QSX4 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.8348 2 718.827366 1435.64018 71012.76 0.47224 0.00033946 -0.38048 -0.0002735 0.091755 6.5956E-05 718.827649919917 722.834568367099 32.208 0.45194 32.208 32.021 32.472 -3.8147E-06 142 22 9 0 0 0 4.9197E-10 2 13773 142.89 136.59 1 1.126 0.90184 0 8520000 3966400 4553600 35029 600 13276 13637 54720;54721 54721 TPCSSLLPLLNAHAATSGK 19 1 0 Unmodified _TPCSSLLPLLNAHAATSGK_ 0 0 0 A0A024R3V0;Q9NUQ6;B8ZZZ7 A0A024R3V0 A0A024R3V0 DNAPTP6;SPATS2L SPATS2-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.6747 3 646.675292 1937.00405 NaN NaN NaN -0.38317 -0.00024778 NaN NaN NaN NaN 93.912 0.26471 93.912 93.727 93.992 0 0 0 0 0.029397 1 58266 28.891 22.474 1 NaN NaN 0 5361100 5361100 0 35030 141 13277 13638 54722 54722 TPDGQYIYR 9 0 1 Unmodified _TPDGQYIYR_ 0 0 0 E7EXA6;Q96S08;A0A0D9SF58;Q8WVB6 E7EXA6 E7EXA6 CHTF18;RUVBL Chromosome transmission fidelity protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.7761 2 556.772188 1111.52982 82942.84 0.52491 0.00029226 0.013305 7.4076E-06 0.53822 0.00029966 556.772124949435 562.277722074344 38.916 0.2759 38.916 38.775 39.051 0 64 22 4 0 0 0 0.0014644 1 20496 85.064 67.678 1 1.1471 1.1417 0 8085200 3278000 4807200 35031 524 13278 13639 54723 54723 TPEEVIEYSAVFWER 15 0 1 Unmodified _TPEEVIEYSAVFWER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 932.9551 2 927.949066 1853.88358 63001.21 1.0017 0.00092949 -0.30357 -0.0002817 0.69809 0.00064779 927.94885552082 933.454563838171 134 0.37277 134 133.81 134.18 0 79 15 8 0 0 0 0.00054215 1 81655 55.261 55.261 1 4.9908 4.2957 0 7236400 1138000 6098400 35032 1391 13279 13640 54724 54724 TPEEVIEYSAVFWER 15 0 1 Unmodified _TPEEVIEYSAVFWER_ 0 0 0 O60264;B7ZAX9;B4DZC0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 933.455 2 927.949066 1853.88358 64009.47 1.0593 0.00098302 0.01422 1.3195E-05 1.0736 0.00099621 927.948815399491 932.953505744816 133.77 0.6003 133.77 133.5 134.1 0 111 27 7 0 0 0 0.025621 2 80757 29.071 29.071 1 5.0101 4.1566 0 5125400 966100 4159300 35033 1391 13279 13640 54725;54726 54726 TPEITVSIIK 10 1 0 Unmodified _TPEITVSIIK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.8394 2 550.831714 1099.64888 82847.3 1.1277 0.00062115 0.2218 0.00012217 1.3494 0.00074332 550.831739902638 554.838794539878 90.91 0.94648 90.91 90.309 91.255 0 379 79 6 0 0 0 9.6112E-06 3 55141 105.52 95.933 1 0.9571 1.0823 0 85267000 42937000 42330000 35034 1936 13280 13641 54727;54728;54729 54729 TPEITVSIIK 10 1 0 Unmodified _TPEITVSIIK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.832 2 550.831714 1099.64888 82754.34 0.62513 0.00034434 -0.094948 -5.23E-05 0.53018 0.00029204 550.831607043029 554.83861549372 89.809 0.94492 89.809 89.387 90.332 0 354 81 6 0 0 0 1.6639E-05 2 55355 100.25 100.25 1 0.92716 1.0363 0 99691000 49700000 49991000 35035 1936 13280 13641 54730;54731 54731 TPEITVSIIK 10 1 0 Unmodified _TPEITVSIIK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.8389 2 550.831714 1099.64888 82082.29 0.43792 0.00024122 0.070139 3.8635E-05 0.50806 0.00027985 550.831685448214 554.838734359401 104.08 0.84735 104.08 103.74 104.59 0 270 55 8 0 0 0 0.0016591 2 59106 72.643 63.055 1 1.2572 1.0198 0 26083000 12356000 13728000 35036 1936 13280 13641 54732;54733 54732 TPEITVSIIK 10 1 0 Unmodified _TPEITVSIIK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.8391 2 550.831714 1099.64888 82341.96 0.35907 0.00019779 0.27003 0.00014874 0.6291 0.00034653 550.831859778194 554.838795226758 103.81 0.72135 103.81 103.54 104.26 0 241 47 8 0 0 0 9.7768E-06 2 58061 105.4 95.808 1 1.1433 0.94208 0 29368000 13760000 15608000 35037 1936 13280 13641 54734;54735 54734 TPEIYLAYR 9 0 1 Unmodified _TPEIYLAYR_ 0 0 0 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;B4DF22 Q58EY4;Q59G16 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.3041 2 563.300581 1124.58661 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.17 1 80.17 79.67 80.67 0 0 0 0 4.093E-06 1 47630 116.37 80.926 1 35038 1798;321 13281 13642 54736 54736 TPELNLDQFHDK 12 1 0 Unmodified _TPELNLDQFHDK_ 0 0 0 P27824;H0Y9Q7;D6RGY2;Q6ZP56;D6RFL1;H0Y9H1 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.9112 3 486.240412 1455.69941 86342.95 0.13214 6.425E-05 0.58336 0.00028365 0.71549 0.0003479 486.241070877485 488.911910997546 69.023 0.95962 69.023 68.702 69.662 0 357 82 8 0 0 0 0.0022118 2 39965 35.246 35.246 1 0.9864 1.0748 0 49580000 23898000 25682000 35039 1526 13282 13643 54737;54738 54737 TPELNLDQFHDK 12 1 0 Unmodified _TPELNLDQFHDK_ 0 0 0 P27824;H0Y9Q7;D6RGY2;Q6ZP56;D6RFL1;H0Y9H1 P27824 P27824 CANX Calnexin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8669 2 728.85698 1455.69941 NaN NaN NaN 1.5198 0.0011077 NaN NaN NaN NaN 69.003 0.24252 69.003 68.915 69.157 0 0 0 0 0.0070257 1 40042 59.265 31.44 1 NaN NaN 0 6855400 0 6855400 35040 1526 13282 13643 54739 54739 TPELNLDQFHDK 12 1 0 Unmodified _TPELNLDQFHDK_ 0 0 0 P27824;H0Y9Q7;D6RGY2;Q6ZP56;D6RFL1;H0Y9H1 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.9113 3 486.240412 1455.69941 86767.61 0.20825 0.00010126 0.13248 6.4418E-05 0.34073 0.00016568 486.240461759544 488.911776226461 67.604 0.62482 67.604 67.375 68 0 235 53 7 0 0 0 0.0057458 2 39997 36.107 33.411 1 0.93609 1.0549 0 60163000 29834000 30329000 35041 1526 13282 13643 54740;54741 54740 TPELPEPSVK 10 1 0 Unmodified _TPELPEPSVK_ 0 0 0 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.7986 2 548.797872 1095.58119 NaN NaN NaN 0.58089 0.00031879 NaN NaN NaN NaN 58.76 0.37901 58.76 58.614 58.993 -3.8147E-06 0 0 0 0.039892 1 34167 49.418 29.632 1 NaN NaN 0 3199500 3199500 0 35042 570 13283 13644 54742 54742 TPELTWER 8 0 1 Unmodified _TPELTWER_ 0 0 0 Q6ZMM9;Q2NKW8;H0Y8B3;Q6ZNS6;A0A024R0A8;V5YQL4;O43865;Q96HN2;Q6ZMI1;Q9BTL0;O43210 Q6ZMM9 Q6ZMM9 AHCYL1;AHCYL2;FGFR2-AHCYL1 Adenosylhomocysteinase;Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.2657 2 516.261456 1030.50836 87027.98 0.39666 0.00020478 -0.31432 -0.00016227 0.082338 4.2508E-05 516.26135089761 521.265508210124 59.875 0.4467 59.875 59.659 60.106 0 139 36 6 0 0 0 0.0010104 2 34879 116.73 64.042 1 1.54 1.5341 0 16491000 6159000 10332000 35043 40 13284 13645 54743;54744 54743 TPENFPCK 8 1 0 Unmodified _TPENFPCK_ 0 0 0 CON__P06868;A0A0F7G8J1;B2R7F8;P00747 CON__P06868 CON__P06868 PLG Plasminogen;Plasmin heavy chain A;Activation peptide;Angiostatin;Plasmin heavy chain A, short form;Plasmin light chain B ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 496.7291 2 496.728935 991.443317 NaN NaN NaN 0.20641 0.00010253 NaN NaN NaN NaN 30.247 0.65567 30.247 29.934 30.59 1.9073E-06 0 0 0 0.007909 1 11952 81.296 52.784 1 NaN NaN 0 5403700 5403700 0 + 35044 1157 13285 13646 54745 54745 TPENYPNAGLTMNYCR 16 0 1 Oxidation (M) _TPENYPNAGLTM(ox)NYCR_ TPENYPNAGLTM(1)NYCR TPENYPNAGLTM(56.09)NYCR 0 1 0 CON__P06868;B2R7F8;P00747;B4DPH4 CON__P06868 CON__P06868 PLG Plasminogen;Plasmin heavy chain A;Activation peptide;Angiostatin;Plasmin heavy chain A, short form;Plasmin light chain B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.4211 2 958.916917 1915.81928 NaN NaN NaN 0.12561 0.00012045 NaN NaN NaN NaN 57.563 0.56646 57.563 57.198 57.764 -3.8147E-06 0 0 0 0.0010968 2 33169 56.087 46.898 1 NaN NaN 0 9120400 9120400 0 + 35045 1157 13286 13647 54746;54747 54747 871 TPEPVVPTAPEPHPTTSTDQPVTPK 25 1 0 Unmodified _TPEPVVPTAPEPHPTTSTDQPVTPK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 878.451 3 875.11318 2622.31771 65190.43 0.67483 0.00059055 -0.21344 -0.00018678 0.46139 0.00040377 875.447498700754 878.118477635706 70.743 0.46681 70.743 70.501 70.968 -7.6294E-06 225 37 9 0 0 0 1.4439E-13 4 41140 81.949 81.949 1 0.55348 0.54531 0 24402000 15116000 9286100 35046 1738 13287 13648 54748;54749;54750;54751 54750 TPEPVVPTAPEPHPTTSTDQPVTPK 25 1 0 Unmodified _TPEPVVPTAPEPHPTTSTDQPVTPK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.1198 3 875.11318 2622.31771 65593.48 0.36436 0.00031886 -0.01997 -1.7476E-05 0.34439 0.00030138 875.447498993115 878.118919203596 69.532 0.43827 69.532 69.316 69.754 0 215 36 9 0 0 0 2.9066E-12 2 41409 66.853 66.853 1 0.54009 0.56493 0 24233000 15840000 8392400 35047 1738 13287 13648 54752;54753 54753 TPEQVAEEEYLLQELR 16 0 1 Unmodified _TPEQVAEEEYLLQELR_ 0 0 0 B4DQG8;Q9NPF5;Q5TG40;Q5TG39 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.9922 2 973.98892 1945.96329 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.34 1 114.34 113.84 114.84 0 0 0 0 0.022812 1 72548 42.809 25.867 1 35048 1024 13288 13649 54754 54754 TPEQVAEEEYLLQELR 16 0 1 Unmodified _TPEQVAEEEYLLQELR_ 0 0 0 B4DQG8;Q9NPF5;Q5TG40;Q5TG39 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 974.49 2 973.98892 1945.96329 62701.06 0.41706 0.00040621 0.78695 0.00076648 1.204 0.0011727 974.490188841756 979.49524247623 126.24 0.40569 126.24 126.04 126.45 0 78 14 8 0 0 0 0.0056242 1 75915 35.803 35.803 1 0.99342 0.83867 0 4793600 2471900 2321800 35049 1024 13288 13649 54755 54755 TPESIVPIAPELQPSTSR 18 0 1 Unmodified _TPESIVPIAPELQPSTSR_ 0 0 0 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.5179 2 961.515105 1921.01566 NaN NaN NaN 0.4512 0.00043384 NaN NaN NaN NaN 106.71 0.35251 106.71 106.48 106.83 -7.6294E-06 0 0 0 0.0016329 1 66281 53.252 47.407 1 NaN NaN 0 4642100 0 4642100 35050 1738 13289 13650 54756 54756 TPESIVPIAPELQPSTSR 18 0 1 Unmodified _TPESIVPIAPELQPSTSR_ 0 0 0 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 962.0177 2 961.515105 1921.01566 63537.16 0.58314 0.0005607 -1.35 -0.0012981 -0.76688 -0.00073737 961.51285482641 966.518799218049 106.15 0.44617 106.15 105.9 106.34 0 121 34 6 0 0 0 3.2614E-05 1 67541 64.65 56.926 1 0.41645 0.4176 0 17809000 11878000 5931200 35051 1738 13289 13650 54757 54757 TPESIVPIAPELQPSTSR 18 0 1 Unmodified _TPESIVPIAPELQPSTSR_ 0 0 0 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 962.017 2 961.515105 1921.01566 62548.87 0.41769 0.00040161 0.82975 0.00079781 1.2474 0.0011994 962.018549420191 966.519439166413 118.03 0.86037 118.03 117.65 118.51 0 152 36 9 0 0 0 3.4146E-05 2 69577 63.662 58.383 1 0.45965 0.39172 0 8957400 5904200 3053100 35052 1738 13289 13650 54758;54759 54759 TPESIVPIAPELQPSTSR 18 0 1 Unmodified _TPESIVPIAPELQPSTSR_ 0 0 0 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 961.5157 2 961.515105 1921.01566 63567.61 0.074948 7.2063E-05 0.55104 0.00052984 0.62599 0.0006019 961.515251304521 966.519651512008 117.82 0.42169 117.82 117.6 118.02 0 124 20 8 0 0 0 3.9075E-05 2 68558 61.375 59.363 1 0.50733 0.42045 0 7858100 5046800 2811300 35053 1738 13289 13650 54760;54761 54761 TPESKPTILVK 11 2 0 Unmodified _TPESKPTILVK_ 0 0 1 Q9Y3B9;A8K201;A0JLN3 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.2544 3 404.911456 1211.71254 95262.64 0.26095 0.00010566 0.10511 4.2559E-05 0.36606 0.00014822 405.245875353592 410.254249640004 34.754 0.62051 34.754 34.53 35.15 0 203 53 6 0 0 0 0.0037312 1 17611 42.031 31.421 1 0.80949 0.92873 0 21594000 12011000 9582900 35054 2134 13290 13651 54762 54762 TPETIPLTEDVLITLGK 17 1 0 Unmodified _TPETIPLTEDVLITLGK_ 0 0 0 D6RJF0;D6RHD3;Q9BS16;D6RBN6;D6RAX0;D6RC76 D6RJF0 D6RJF0 CENPK Centromere protein K MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 920.5212 2 920.519325 1839.0241 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.92 1 128.92 128.42 129.42 0 0 0 0 4.76E-09 1 84084 107.37 83.996 1 35055 1203 13291 13652 54763 54763 TPETLVPTAPK 11 1 0 Unmodified _TPETLVPTAPK_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.2817 2 577.326796 1152.63904 82041.27 0.37447 0.00021619 0.38239 0.00022076 0.75686 0.00043695 577.326854960845 581.333823826908 68.713 0.50929 68.713 68.489 68.998 0 129 35 6 0 0 0 0.025291 1 35094 63.426 40.686 1 0.60096 0.4854 0 2983600 1936900 1046600 35056 1738 13292 13653 54764 54764 TPETVVPTALELQPSTSTDRPVTSEPTSQATR 32 0 2 Unmodified _TPETVVPTALELQPSTSTDRPVTSEPTSQATR_ 0 0 1 Q14676;B4DYH4;H0Y6Z8 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1132.9111 3 1132.90915 3395.70562 56892.71 0.13507 0.00015302 0.33219 0.00037634 0.46726 0.00052936 1133.24366852348 1139.91546584627 107.59 0.37363 107.59 107.43 107.8 0 139 21 10 0 0 0 0.0036319 2 61646 23.368 23.368 1 0.74766 0.62721 0 12997000 8463000 4534300 35057 1738 13293 13654 54765;54766 54766 TPETVVPTALELQPSTSTDRPVTSEPTSQATR 32 0 2 Unmodified _TPETVVPTALELQPSTSTDRPVTSEPTSQATR_ 0 0 1 Q14676;B4DYH4;H0Y6Z8 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1133.2434 3 1132.90915 3395.70562 57639.28 0.13432 0.00015217 0.65686 0.00074416 0.79117 0.00089632 1133.24358574592 1139.91549866458 107.47 0.44091 107.47 107.27 107.71 0 228 30 10 0 0 0 2.1632E-05 2 60727 36.378 36.378 1 0.63855 0.58377 0 9310800 5810400 3500500 35058 1738 13293 13654 54767;54768 54768 TPETVVPTAPELQISTSTDQPVTPKPTSR 29 1 1 Unmodified _TPETVVPTAPELQISTSTDQPVTPKPTSR_ 0 0 1 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1026.8729 3 1026.53822 3076.59282 60435.93 0.47674 0.0004894 -0.28651 -0.00029411 0.19024 0.00019528 1026.87255827923 1032.87959334216 109.46 0.35883 109.46 109.29 109.64 0 100 15 10 0 0 0 5.5327E-16 2 63039 64.779 64.779 1 0.50692 0.42837 0 7967200 4988700 2978500 35059 1738 13294 13655 54769;54770 54770 TPETVVPTAPELQISTSTDQPVTPKPTSR 29 1 1 Unmodified _TPETVVPTAPELQISTSTDQPVTPKPTSR_ 0 0 1 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1026.8726 3 1026.53822 3076.59282 60883.87 0.45544 0.00046752 -0.32833 -0.00033704 0.12711 0.00013049 1026.87251471369 1032.879933119 109.36 0.34337 109.36 109.18 109.53 0 95 14 10 0 0 0 1.3665E-06 2 62020 37.344 37.344 1 0.50181 0.42297 0 8386100 5283500 3102700 35060 1738 13294 13655 54771;54772 54771 TPEVSFLPEEATEEAGVR 18 0 1 Unmodified _TPEVSFLPEEATEEAGVR_ 0 0 0 A0A024QZH6;Q9H7N4 A0A024QZH6 A0A024QZH6 SR-A1;SCAF1 Splicing factor, arginine/serine-rich 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 986.4868 2 980.978552 1959.94255 61517.28 0.070762 6.9416E-05 1.9466 0.0019096 2.0174 0.001979 981.480714352076 986.485849634848 104.07 0.19112 104.07 103.94 104.13 0 32 15 4 0 0 0 0.012579 1 64242 27.137 27.137 1 1.2737 1.3243 0 5427800 2721900 2705900 35061 22 13295 13656 54773 54773 TPEVSFLPEEATEEAGVR 18 0 1 Unmodified _TPEVSFLPEEATEEAGVR_ 0 0 0 A0A024QZH6;Q9H7N4 A0A024QZH6 A0A024QZH6 SR-A1;SCAF1 Splicing factor, arginine/serine-rich 19 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.9775 2 980.978552 1959.94255 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.03 1 104.03 103.53 104.53 0 0 0 0 0.0011446 1 64239 75.479 60.579 1 35062 22 13295 13656 54774 54774 TPEVSFLPEEATEEAGVR 18 0 1 Unmodified _TPEVSFLPEEATEEAGVR_ 0 0 0 A0A024QZH6;Q9H7N4 A0A024QZH6 A0A024QZH6 SR-A1;SCAF1 Splicing factor, arginine/serine-rich 19 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 985.9832 2 980.978552 1959.94255 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.24 1 103.24 102.74 103.74 7.6294E-06 0 0 0 0.026392 1 65282 41.052 28.072 1 35063 22 13295 13656 54775 54775 TPFLLSGTSYK 11 1 0 Unmodified _TPFLLSGTSYK_ 0 0 0 P55084;B5MD38;D6W539;C9JEY0;C9JE81;C9K0M0 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.3273 2 607.326796 1212.63904 78770.3 0.81568 0.00049538 -0.056229 -3.4149E-05 0.75945 0.00046123 607.326648562229 611.333612396079 85.085 0.53341 85.085 84.865 85.398 0 187 44 6 0 0 0 0.0017577 1 51057 65.056 65.056 1 1.1908 1.2957 0 48556000 24053000 24503000 35064 1615 13296 13657 54776 54776 TPFLLSGTSYK 11 1 0 Unmodified _TPFLLSGTSYK_ 0 0 0 P55084;B5MD38;D6W539;C9JEY0;C9JE81;C9K0M0 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3335 2 607.326796 1212.63904 77516.72 0.86324 0.00052427 -0.20187 -0.0001226 0.66137 0.00040167 607.326949721012 611.333653601068 83.926 0.50437 83.926 83.765 84.269 0 178 41 6 0 0 0 9.668E-05 1 51451 97.277 86.469 1 1.3808 1.5523 0 72897000 29346000 43552000 35065 1615 13296 13657 54777 54777 TPFLLSGTSYK 11 1 0 Unmodified _TPFLLSGTSYK_ 0 0 0 P55084;B5MD38;D6W539;C9JEY0;C9JE81;C9K0M0 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.327 2 607.326796 1212.63904 78897.38 0.67972 0.00041281 0.56009 0.00034016 1.2398 0.00075297 607.327393552582 611.334155528595 97.309 0.60785 97.309 97.039 97.647 -7.6294E-06 136 30 7 0 0 0 0.01237 1 54666 47.894 47.894 1 1.0367 0.82208 0 4634200 2303900 2330300 35066 1615 13296 13657 54778 54778 TPFLLSGTSYK 11 1 0 Unmodified _TPFLLSGTSYK_ 0 0 0 P55084;B5MD38;D6W539;C9JEY0;C9JE81;C9K0M0 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.3273 2 607.326796 1212.63904 79849.04 0.32047 0.00019463 0.42104 0.00025571 0.74151 0.00045034 607.327142187956 611.334099560549 97.11 0.62088 97.11 96.863 97.484 0 129 29 7 0 0 0 0.0096123 1 53792 49.3 49.3 1 1.0381 0.83591 0 4269200 2035800 2233400 35067 1615 13296 13657 54779 54779 TPFNTDLGENSGIGK 15 1 0 Unmodified _TPFNTDLGENSGIGK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.8898 2 775.378277 1548.742 64831.82 0.67688 0.00052484 0.71953 0.00055791 1.3964 0.0010827 775.377759114527 779.385157819744 73.539 0.50291 73.539 73.3 73.803 7.6294E-06 112 46 5 0 0 0 2.0995E-06 1 43088 98.942 98.942 1 0.62929 0.64379 0 13107000 7432300 5675000 35068 1849 13297 13658 54780 54780 TPFNTDLGENSGIGK 15 1 0 Unmodified _TPFNTDLGENSGIGK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.3775 2 775.378277 1548.742 67341.17 0.66884 0.00051861 -0.14335 -0.00011115 0.52549 0.00040745 775.37809986529 779.385600061387 72.498 0.48479 72.498 72.248 72.733 0 140 44 4 0 0 0 2.6135E-30 1 43553 151.52 143.61 1 0.64186 0.64822 0 16328000 10904000 5423700 35069 1849 13297 13658 54781 54781 TPFNTDLGENSGIGK 15 1 0 Unmodified _TPFNTDLGENSGIGK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 779.3843 2 775.378277 1548.742 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.312 1 72.312 71.812 72.812 0 0 0 0 1.1113E-18 1 43400 132.79 103.05 1 35070 1849 13297 13658 54782 54782 TPGAATASASGAAEDGACGCLPNPGTFEECHR 32 0 1 Unmodified _TPGAATASASGAAEDGACGCLPNPGTFEECHR_ 0 0 0 O96008;K7EJ57 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1074.1217 3 1073.789 3218.34516 58820.62 0.0087823 9.4304E-06 -0.10697 -0.00011486 -0.098185 -0.00010543 1074.12332562345 1077.45972404226 76.985 0.60008 76.985 76.701 77.301 7.6294E-06 430 52 11 0 0 0 6.5485E-27 2 45310 82.086 82.086 1 1.1621 1.2499 0 47334000 19542000 27792000 35071 1433 13298 13659 54783;54784 54784 TPGAATASASGAAEDGACGCLPNPGTFEECHR 32 0 1 Unmodified _TPGAATASASGAAEDGACGCLPNPGTFEECHR_ 0 0 0 O96008;K7EJ57 O96008 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1074.1205 3 1073.789 3218.34516 58659.34 -0.030283 -3.2518E-05 -0.11364 -0.00012203 -0.14392 -0.00015454 1074.12338756576 1077.45974668838 76.059 0.49152 76.059 75.843 76.334 -7.6294E-06 412 45 12 0 0 0 1.1498E-12 3 45799 56.021 56.021 1 1.1687 1.343 0 52827000 23337000 29491000 35072 1433 13298 13659 54785;54786;54787 54787 TPGFSVQSISDFEK 14 1 0 Unmodified _TPGFSVQSISDFEK_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.3849 2 771.377746 1540.74094 66247.63 1.0987 0.00084748 0.24665 0.00019026 1.3453 0.0010377 771.378251572151 775.384765487542 100.83 0.83345 100.83 100.45 101.29 0 331 60 8 0 0 0 2.1161E-14 1 61703 131.13 118.12 1 0.99918 1.1319 0 154640000 77296000 77342000 35073 2080 13299 13660 54788 54788 TPGFSVQSISDFEK 14 1 0 Unmodified _TPGFSVQSISDFEK_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.8797 2 771.377746 1540.74094 65693.52 0.70918 0.00054704 -0.14395 -0.00011104 0.56523 0.00043601 771.378103297373 775.384539868907 100.24 0.92326 100.24 99.62 100.54 0 385 73 8 0 0 0 1.9589E-46 2 62764 225.1 225.1 1 1.0136 1.144 0 127550000 71316000 56235000 35074 2080 13299 13660 54789;54790 54790 TPGFSVQSISDFEK 14 1 0 Unmodified _TPGFSVQSISDFEK_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 771.376 2 771.377746 1540.74094 67856.91 1.1133 0.00085878 0.012284 9.4753E-06 1.1256 0.00086825 771.37780215932 775.384488471721 113.38 1.0517 113.38 112.86 113.91 7.6294E-06 238 50 10 0 0 0 4.1778E-05 3 65951 121.21 121.21 1 1.6371 1.3727 0 52134000 20386000 31748000 35075 2080 13299 13660 54791;54792;54793 54793 TPGFSVQSISDFEK 14 1 0 Unmodified _TPGFSVQSISDFEK_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 775.3814 2 771.377746 1540.74094 NaN NaN NaN -0.0053731 -4.1447E-06 NaN NaN NaN NaN 113.27 0.60719 113.27 113 113.61 0 0 0 0 3.1093E-06 1 64910 98.902 83.641 1 NaN NaN 0 34415000 0 34415000 35076 2080 13299 13660 54794 54794 TPGFSVQSISDFEK 14 1 0 Unmodified _TPGFSVQSISDFEK_ 0 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 771.3784 2 771.377746 1540.74094 NaN NaN NaN -1.1999 -0.00092557 NaN NaN NaN NaN 113.27 1.4833 113.27 112.28 113.77 -7.6294E-06 0 0 0 0.0094345 1 64935 52.463 42.776 1 NaN NaN 0 19472000 19472000 0 35077 2080 13299 13660 54795 54795 TPGPGAQSALR 11 0 1 Unmodified _TPGPGAQSALR_ 0 0 0 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.7866 2 527.78563 1053.55671 83532.13 0.13587 7.1711E-05 -0.30915 -0.00016317 -0.17328 -9.1455E-05 527.78567141794 532.789549739875 27.037 0.70186 27.037 26.851 27.553 0 221 38 12 0 0 0 6.3169E-10 2 12267 128.03 102.23 1 0.85784 1.0186 0 865120000 452400000 412720000 35078 1638 13300 13661 54796;54797 54796 TPGPGAQSALR 11 0 1 Unmodified _TPGPGAQSALR_ 0 0 0 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.7863 2 527.78563 1053.55671 82103.87 0.52162 0.0002753 -0.50436 -0.00026619 0.017259 9.1092E-06 527.785582724799 532.789397594672 26.712 0.8355 26.712 26.485 27.32 0 218 41 12 0 0 0 5.9712E-66 2 11992 221.83 194.09 1 0.83449 0.98497 0 1300800000 707300000 593520000 35079 1638 13300 13661 54798;54799 54799 TPGPGAQSALR 11 0 1 Unmodified _TPGPGAQSALR_ 0 0 0 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.7858 2 527.78563 1053.55671 83248.29 0.22586 0.0001192 -0.15627 -8.2478E-05 0.069586 3.6727E-05 527.786037121944 532.790026650627 30.43 1.4404 30.43 30.15 31.59 0 351 91 7 0 0 0 0.00038273 2 12523 82.831 66.949 1 1.052 0.91197 0 172100000 82147000 89953000 35080 1638 13300 13661 54800;54801 54800 TPGPGAQSALR 11 0 1 Unmodified _TPGPGAQSALR_ 0 0 0 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.786 2 527.78563 1053.55671 82238.26 0.169 8.9197E-05 -0.34802 -0.00018368 -0.17902 -9.4485E-05 527.785992128377 532.789939199189 30.582 1.606 30.582 30.237 31.843 0 368 87 8 0 0 0 0.0012566 1 12163 68.893 52.222 1 1.0355 0.90425 0 149040000 74098000 74945000 35081 1638 13300 13661 54802 54802 TPGPPGLTTTPAPPDK 16 1 0 Unmodified _TPGPPGLTTTPAPPDK_ 0 0 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.9134 2 773.909213 1545.80387 70463.42 0.61273 0.0004742 -0.54018 -0.00041805 0.07255 5.6147E-05 773.909225105322 777.914873148255 66.123 0.55936 66.123 65.88 66.44 0 176 51 5 0 0 0 0.00028556 2 38059 55.899 55.899 1 0.8438 0.88943 0 15461000 7889400 7571200 35082 1879 13301 13662 54803;54804 54804 TPGPPGLTTTPAPPDK 16 1 0 Unmodified _TPGPPGLTTTPAPPDK_ 0 0 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.9171 2 773.909213 1545.80387 68806.16 0.35884 0.00027771 0.12369 9.5726E-05 0.48253 0.00037343 773.90908594679 778.417864354817 65.024 0.65599 65.024 64.756 65.412 0 153 52 5 0 0 0 4.1375E-12 2 38253 117.03 101.89 1 0.77432 0.78751 0 16849000 9358200 7491000 35083 1879 13301 13662 54805;54806 54805 TPGPPGLTTTPAPPDK 16 1 0 Unmodified _TPGPPGLTTTPAPPDK_ 0 0 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 777.9164 2 773.909213 1545.80387 NaN NaN NaN -0.091605 -7.0894E-05 NaN NaN NaN NaN 76.065 0.63802 76.065 75.766 76.404 -7.6294E-06 0 0 0 0.0056983 1 39620 53.001 38.029 1 NaN NaN 0 2722300 0 2722300 35084 1879 13301 13662 54807 54807 TPIPLLLR 8 0 1 Unmodified _TPIPLLLR_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;G1UI29;A0A087X0E3 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.8076 2 461.807845 921.601138 90633.82 -0.21008 -9.7019E-05 0.2639 0.00012187 0.053819 2.4854E-05 461.807893953603 466.81201258223 103.6 0.64668 103.6 103.26 103.91 0 144 54 4 0 0 0 0.030669 1 65503 51.787 51.787 1 0.68249 0.68795 0 6435000 3298100 3136900 35085 476 13302 13663 54808 54808 TPLEDYSGECFR 12 0 1 Unmodified _TPLEDYSGECFR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.3246 2 737.319373 1472.62419 72674.89 0.63766 0.00047016 -0.089 -6.5621E-05 0.54866 0.00040454 737.319299038629 742.3232181965 78.786 0.38694 78.786 78.618 79.005 0 50 21 4 0 0 0 0.048127 1 42336 32.946 32.946 1 1.0555 0.93567 0 1560600 765740 794870 35086 1897 13303 13664 54809 54809 TPLENLVLQAK 11 1 0 Unmodified _TPLENLVLQAK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3;Q6W6M7 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3682 2 613.36117 1224.70779 77774.05 0.55412 0.00033988 -0.87003 -0.00053364 -0.3159 -0.00019376 613.360430623619 617.367862209932 94.68 0.73784 94.68 94.403 95.141 0 244 67 5 0 0 0 2.3712E-12 2 57383 140.16 129 1 1.3633 1.4182 0 16894000 8442100 8451900 35087 122 13304 13665 54810;54811 54810 TPLENLVLQAK 11 1 0 Unmodified _TPLENLVLQAK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3;Q6W6M7 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.3614 2 613.36117 1224.70779 78197.35 0.42413 0.00026014 0.28477 0.00017467 0.7089 0.00043481 613.361207754378 617.368424352312 93.766 0.78356 93.766 93.424 94.207 -7.6294E-06 250 68 6 0 0 0 2.5377E-12 2 58185 139.43 125.44 1 1.301 1.3694 0 35117000 14519000 20598000 35088 122 13304 13665 54812;54813 54813 TPLENLVLQAK 11 1 0 Unmodified _TPLENLVLQAK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3;Q6W6M7 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.362 2 613.36117 1224.70779 78933.13 0.56468 0.00034635 -0.066266 -4.0645E-05 0.49841 0.00030571 613.361115584 617.368180240311 108.16 0.48767 108.16 107.89 108.38 7.6294E-06 112 25 6 0 0 0 0.0017859 2 62061 64.841 57.91 1 1.6308 1.287 0 5375000 2082500 3292500 35089 122 13304 13665 54814;54815 54815 TPLENLVLQAK 11 1 0 Unmodified _TPLENLVLQAK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3;Q6W6M7 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 617.3691 2 613.36117 1224.70779 78880.98 0.50765 0.00031137 -0.1067 -6.5449E-05 0.40095 0.00024592 613.361176381845 617.368180803462 108.04 0.61824 108.04 107.69 108.31 0 117 29 5 0 0 0 0.00045777 1 60999 76.943 69.563 1 1.547 1.2056 0 3493600 1428300 2065300 35090 122 13304 13665 54816 54816 TPLEPPPIVVVVMGPPK 17 1 0 Oxidation (M) _TPLEPPPIVVVVM(ox)GPPK_ TPLEPPPIVVVVM(1)GPPK TPLEPPPIVVVVM(69.72)GPPK 0 1 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 898.0234 2 893.512791 1785.01103 66040.16 1.0193 0.00091073 -0.24846 -0.00022201 0.7708 0.00068872 894.01378783574 897.519955291147 118.25 0.6741 118.25 117.96 118.63 -7.6294E-06 230 39 8 0 0 0 3.4163E-05 2 75735 69.721 69.721 1 1.7509 1.7179 0 22810000 7871500 14938000 35091 1742 13305 13666 54817;54818 54817 1594 TPLEPPPIVVVVMGPPK 17 1 0 Oxidation (M) _TPLEPPPIVVVVM(ox)GPPK_ TPLEPPPIVVVVM(1)GPPK TPLEPPPIVVVVM(83.08)GPPK 0 1 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.5227 2 893.512791 1785.01103 65389.67 0.89047 0.00079565 0.12859 0.0001149 1.0191 0.00091055 893.512870086635 897.520259974758 117.79 0.63028 117.79 117.48 118.11 -7.6294E-06 256 42 8 0 0 0 1.1212E-05 1 77206 83.081 83.081 1 1.7044 1.7277 0 29455000 10437000 19019000 35092 1742 13305 13666 54819 54819 1594 TPLEPPPIVVVVMGPPK 17 1 0 Unmodified _TPLEPPPIVVVVMGPPK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 889.5251 2 885.515334 1769.01611 72226.57 1.1997 0.0010624 0.0085088 7.5347E-06 1.2082 0.0010699 885.515324166089 889.52361014299 129.75 0.28873 129.75 129.63 129.92 0 47 14 6 0 0 0 0.00044307 1 84548 47.844 47.844 1 0.66153 0.67248 0 4569200 2600900 1968300 35093 1742 13305 13667 54820 54820 TPLEQEIFNLLHK 13 1 0 Unmodified _TPLEQEIFNLLHK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.9595 3 527.959357 1580.85624 83449.16 0.56513 0.00029837 -0.26238 -0.00013853 0.30275 0.00015984 527.959185470872 530.630541765964 121.1 0.87866 121.1 120.7 121.58 7.6294E-06 380 59 9 0 0 0 0.006287 3 77918 27.467 27.467 1 0.98525 1.1073 0 69858000 32553000 37306000 35094 2008;393 13306 13668 54821;54822;54823 54822 TPLEQEIFNLLHK 13 1 0 Unmodified _TPLEQEIFNLLHK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.4386 2 791.435398 1580.85624 NaN NaN NaN 0.24031 0.00019019 NaN NaN NaN NaN 121.09 0.51938 121.09 120.85 121.37 -7.6294E-06 0 0 0 0.0056187 1 78085 57.019 45.919 1 NaN NaN 0 5486400 5486400 0 35095 2008;393 13306 13668 54824 54824 TPLEQEIFNLLHK 13 1 0 Unmodified _TPLEQEIFNLLHK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.9658 3 527.959357 1580.85624 83394.67 0.76656 0.00040471 -0.26536 -0.0001401 0.5012 0.00026461 527.959233921834 530.630510063982 120.43 0.87685 120.43 120 120.88 0 429 63 10 0 0 0 5.3187E-14 2 79321 130.56 130.56 1 1.0021 1.1285 0 122570000 60652000 61916000 35096 2008;393 13306 13668 54825;54826 54826 TPLEQEIFNLLHK 13 1 0 Unmodified _TPLEQEIFNLLHK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.435 2 791.435398 1580.85624 NaN NaN NaN 0.066519 5.2646E-05 NaN NaN NaN NaN 120.43 0.46239 120.43 120.21 120.67 7.6294E-06 0 0 0 1.1755E-09 1 79454 116.77 89.437 1 NaN NaN 0 9737800 9737800 0 35097 2008;393 13306 13668 54827 54827 TPLEQEIFNLLHK 13 1 0 Unmodified _TPLEQEIFNLLHK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.9594 3 527.959357 1580.85624 83555.38 0.53012 0.00027988 -0.024906 -1.3149E-05 0.50521 0.00026673 527.959385214453 530.630669278384 133.81 0.62575 133.81 133.42 134.04 0 182 24 10 0 0 0 0.00049209 2 81379 55.291 55.291 1 1.5092 1.2291 0 31362000 13431000 17931000 35098 2008;393 13306 13668 54828;54829 54829 TPLEQEIFNLLHK 13 1 0 Unmodified _TPLEQEIFNLLHK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.4368 2 791.435398 1580.85624 68636.39 0.77603 0.00061418 0.35176 0.00027839 1.1278 0.00089257 791.936967901867 795.442776002659 133.71 0.4707 133.71 133.49 133.97 0 84 18 7 0 0 0 0.00034009 1 81544 63.694 63.694 1 1.4705 1.1526 0 3896300 1829400 2066900 35099 2008;393 13306 13668 54830 54830 TPLEQEIFNLLHK 13 1 0 Unmodified _TPLEQEIFNLLHK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.9653 3 527.959357 1580.85624 83040.83 0.90053 0.00047544 -0.41399 -0.00021857 0.48654 0.00025687 527.959174121015 530.630468121232 133.4 0.58109 133.4 133.13 133.71 0 157 22 10 0 0 0 0.00010075 2 80184 64.313 64.313 1 1.4225 1.1831 0 38432000 16194000 22238000 35100 2008;393 13306 13668 54831;54832 54831 TPLEQEIFNLLHK 13 1 0 Unmodified _TPLEQEIFNLLHK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.4371 2 791.435398 1580.85624 68671.33 1.1772 0.00093165 -0.058718 -4.6472E-05 1.1184 0.00088518 791.435276201183 795.44208189729 133.39 0.41425 133.39 133.19 133.61 1.5259E-05 76 14 7 0 0 0 0.014205 2 80256 38.714 38.714 1 1.4319 1.1671 0 6604100 2823500 3780600 35101 2008;393 13306 13668 54833;54834 54834 TPLFDQIIDMLR 12 0 1 Oxidation (M) _TPLFDQIIDM(ox)LR_ TPLFDQIIDM(1)LR TPLFDQIIDM(101.93)LR 0 1 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3944 2 739.389602 1476.76465 70558.78 1.2355 0.00091348 -0.046825 -3.4622E-05 1.1886 0.00087886 739.891182595066 744.393792028279 129.76 0.92749 129.76 129.56 130.48 0 130 54 5 0 0 0 1.1216E-05 3 84481 101.93 101.93 1 2.4954 2.5132 0 7810100 2935600 4874500 35102 1611 13307 13669 54835;54836;54837 54835 1402 TPLFDQIIDMLR 12 0 1 Oxidation (M) _TPLFDQIIDM(ox)LR_ TPLFDQIIDM(1)LR TPLFDQIIDM(103.91)LR 0 1 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.394 2 739.389602 1476.76465 70790.92 0.78324 0.00057912 0.47286 0.00034963 1.2561 0.00092874 739.389345374834 744.394121150253 129.27 0.41223 129.27 129.1 129.52 0 79 22 6 0 0 0 9.1561E-06 2 86275 103.91 96.171 1 2.3186 2.3213 0 11380000 3929500 7450700 35103 1611 13307 13669 54838;54839 54838 1402 TPLFDQIIDMLR 12 0 1 Oxidation (M) _TPLFDQIIDM(ox)LR_ TPLFDQIIDM(1)LR TPLFDQIIDM(87.57)LR 0 1 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.3952 2 739.389602 1476.76465 69391.86 0.81133 0.00059989 0.10663 7.8845E-05 0.91796 0.00067873 739.389145651981 744.393854495381 129.59 0.91089 129.59 129.36 130.27 -1.5259E-05 105 59 5 0 0 0 0.00011645 1 86838 87.568 87.568 1 2.7097 2.7299 0 10661000 3313700 7347500 35104 1611 13307 13669 54840 54840 1402 TPLHEIALSIK 11 1 0 Unmodified _TPLHEIALSIK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 407.9117 3 407.911568 1220.71287 93366.94 0.18774 7.6582E-05 -0.13619 -5.5554E-05 0.051551 2.1028E-05 407.911504411211 410.582845542706 76.359 1.085 76.359 76.032 77.117 0 475 90 8 0 0 0 0.0001222 2 44920 81.709 61.505 1 1.3559 1.5466 0 176030000 74076000 101960000 35105 1691 13308 13670 54841;54842 54841 TPLHEIALSIK 11 1 0 Unmodified _TPLHEIALSIK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.5833 3 407.911568 1220.71287 93526 0.11784 4.8067E-05 -0.0191 -7.7911E-06 0.098736 4.0276E-05 407.91155049034 410.582885501529 74.582 0.91898 74.582 74.2 75.119 0 428 80 8 0 0 0 0.0022977 2 44875 52.555 35.936 1 1.2819 1.5085 0 385240000 163530000 221710000 35106 1691 13308 13670 54843;54844 54844 TPLHEIALSIK 11 1 0 Unmodified _TPLHEIALSIK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 410.5829 3 407.911568 1220.71287 94111.16 -0.17148 -6.9949E-05 0.11954 4.8764E-05 -0.051936 -2.1185E-05 407.911557140606 410.582946681466 86.515 1.0324 86.515 86.127 87.16 0 342 62 8 0 0 0 0.058596 1 46535 20.009 20.009 1 1.5786 1.2672 0 14019000 5124000 8895100 35107 1691 13308 13670 54845 54845 TPLLDDPVFIHPSSVLFK 18 1 0 Unmodified _TPLLDDPVFIHPSSVLFK_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.424 3 675.706698 2024.09826 75012.04 1.071 0.00072365 -0.35467 -0.00023965 0.71628 0.000484 675.706424892612 678.377649213444 121.72 0.59438 121.72 121.38 121.98 0 179 38 7 0 0 0 1.7374E-05 2 78646 50.077 50.077 1 1.0579 1.0615 0 9879900 6177100 3702800 35108 1897 13309 13671 54846;54847 54847 TPLLDDPVFIHPSSVLFK 18 1 0 Unmodified _TPLLDDPVFIHPSSVLFK_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.7131 3 675.706698 2024.09826 75343.77 0.78341 0.00052935 -0.29591 -0.00019995 0.48749 0.0003294 676.040919133163 678.712196158682 121.04 0.65234 121.04 120.84 121.49 0 159 41 7 0 0 0 6.4428E-06 3 80041 72.184 72.184 1 0.99871 1.07 0 21264000 9747800 11516000 35109 1897 13309 13671 54848;54849;54850 54849 TPLLDDPVFIHPSSVLFK 18 1 0 Unmodified _TPLLDDPVFIHPSSVLFK_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.7144 3 675.706698 2024.09826 73331.13 0.73511 0.00049672 -0.31954 -0.00021592 0.41557 0.00028081 676.040839019567 678.377800726379 133.66 0.54779 133.66 133.42 133.97 0 146 21 10 0 0 0 1.5008E-05 2 81341 58.427 58.427 1 1.2045 0.93307 0 13025000 5365900 7659100 35110 1897 13309 13671 54851;54852 54851 TPLLDDPVFIHPSSVLFK 18 1 0 Unmodified _TPLLDDPVFIHPSSVLFK_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.7072 3 675.706698 2024.09826 73719.26 1.0847 0.00073295 -0.67143 -0.00045369 0.41328 0.00027926 675.706202172107 678.377508938075 133.31 0.496 133.31 133.11 133.61 1.5259E-05 119 18 10 0 0 0 5.9892E-05 2 80238 45.608 45.608 1 1.0928 0.89578 0 12458000 5856600 6601700 35111 1897 13309 13671 54853;54854 54854 TPLRPLDPTR 10 0 2 Unmodified _TPLRPLDPTR_ 0 0 1 E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637;C9JF13;C9J6B6;C9K073;C9J2Z7 E7EX73 E7EX73 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 389.2277 3 389.227779 1164.66151 94220.31 0.11355 4.4198E-05 -0.70772 -0.00027546 -0.59417 -0.00023127 389.227385329323 395.899826989279 39.605 0.7214 39.605 39.126 39.847 -3.8147E-06 245 59 8 0 0 0 0.036902 1 20503 26.012 11.926 1 1.8255 1.9868 0 66977000 21178000 45799000 35112 896 13310 13672 54855 54855 TPLSTGGTLAFVSPSLAVHK 20 1 0 Unmodified _TPLSTGGTLAFVSPSLAVHK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.7019 3 661.701835 1982.08368 75192.23 0.73408 0.00048574 -0.14218 -9.4079E-05 0.5919 0.00039166 662.036138944821 664.373051739473 103.11 0.63773 103.11 102.67 103.31 -7.6294E-06 300 50 9 0 0 0 2.6208E-07 2 65097 79.676 79.676 1 0.78388 0.87206 0 50952000 30334000 20618000 35113 229 13311 13673 54856;54857 54857 TPLSTGGTLAFVSPSLAVHK 20 1 0 Unmodified _TPLSTGGTLAFVSPSLAVHK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.0363 3 661.701835 1982.08368 74556.91 0.94181 0.0006232 -0.25984 -0.00017194 0.68197 0.00045126 662.03586942673 664.372928920707 115.26 0.48766 115.26 115.06 115.55 0 128 22 10 0 0 0 5.0189E-06 2 67507 49.036 49.036 1 2.0822 1.6161 0 14408000 5184800 9223300 35114 229 13311 13673 54858;54859 54859 TPLSTGGTLAFVSPSLAVHK 20 1 0 Unmodified _TPLSTGGTLAFVSPSLAVHK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7;B4E0Q6 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.7079 3 661.701835 1982.08368 73750.07 0.71089 0.0004704 -0.19198 -0.00012703 0.51891 0.00034336 662.035900701704 664.707543570588 115.04 0.66516 115.04 114.81 115.47 7.6294E-06 155 32 10 0 0 0 4.3117E-05 2 66369 41.441 41.441 1 2.2735 1.8266 0 16077000 4826400 11251000 35115 229 13311 13673 54860;54861 54860 TPLVSVLLEGPPHSGK 16 1 0 Unmodified _TPLVSVLLEGPPHSGK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3;Q96D47;D3DXJ4 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.982 3 544.310279 1629.90901 NaN NaN NaN 0.36537 0.00019888 NaN NaN NaN NaN 99.849 0.34087 99.849 99.582 99.923 0 0 0 0 0.0025063 1 61089 50.04 42.67 1 NaN NaN 0 3919200 0 3919200 35116 1096 13312 13674 54862 54862 TPLVSVLLEGPPHSGK 16 1 0 Unmodified _TPLVSVLLEGPPHSGK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3;Q96D47;D3DXJ4 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3157 3 544.310279 1629.90901 83803.16 0.72334 0.00039372 0.16909 9.2035E-05 0.89243 0.00048576 544.644603258148 547.315989546957 98.764 0.64844 98.764 98.415 99.063 0 141 53 5 0 0 0 0.008036 1 61788 21.233 10.446 1 1.2313 1.2355 0 13760000 4411000 9349000 35117 1096 13312 13674 54863 54863 TPMENIGLQDSLLSR 15 0 1 Oxidation (M) _TPM(ox)ENIGLQDSLLSR_ TPM(1)ENIGLQDSLLSR TPM(63.18)ENIGLQDSLLSR 0 1 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.4331 2 845.427444 1688.84033 NaN NaN NaN 0.075103 6.3494E-05 NaN NaN NaN NaN 90.919 0.58292 90.919 90.673 91.255 0 0 0 0 0.00074363 1 54847 63.181 49.001 1 NaN NaN 0 16342000 0 16342000 35118 568 13313 13675 54864 54864 421 TPMENIGLQDSLLSR 15 0 1 Oxidation (M) _TPM(ox)ENIGLQDSLLSR_ TPM(1)ENIGLQDSLLSR TPM(91.62)ENIGLQDSLLSR 0 1 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.4285 2 845.427444 1688.84033 67490.13 0.84758 0.00071656 0.030586 2.5859E-05 0.87816 0.00074242 845.929124782542 850.431590443354 90.077 0.67457 90.077 89.788 90.462 -7.6294E-06 227 60 6 0 0 0 5.7294E-06 2 55593 91.62 83.516 1 1.7212 1.7301 0 19231000 8284200 10947000 35119 568 13313 13675 54865;54866 54866 421 TPNFSTLLCYDR 12 0 1 Unmodified _TPNFSTLLCYDR_ 0 0 0 Q8NI27;A0A0C4DG98;H0Y815;Q6P441 Q8NI27 Q8NI27 THOC2 THO complex subunit 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.855 2 743.853383 1485.69221 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.08 1 104.08 103.58 104.58 -7.6294E-06 0 0 0 0.028131 1 65898 46.844 31.832 1 35120 1929 13314 13676 54867 54867 TPPAPSPFDLPELK 14 1 0 Unmodified _TPPAPSPFDLPELK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.9044 2 754.903399 1507.79225 71600.33 0.88974 0.00067166 -0.024675 -1.8627E-05 0.86506 0.00065304 754.903074535961 758.910065106349 111.76 0.67235 111.76 111.49 112.16 -7.6294E-06 237 48 7 0 0 0 0.00035359 1 70613 61.435 61.435 1 0.93487 0.9836 0 30613000 17477000 13137000 35121 1803 13315 13677 54868 54868 TPPAPSPFDLPELK 14 1 0 Unmodified _TPPAPSPFDLPELK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.9114 2 754.903399 1507.79225 71989.34 0.66117 0.00049912 -0.098777 -7.4567E-05 0.56239 0.00042455 754.902900069259 758.91016368844 111.23 0.60999 111.23 110.95 111.56 -7.6294E-06 216 41 7 0 0 0 0.002672 2 71976 48.44 41.751 1 0.82601 0.89611 0 22376000 10412000 11964000 35122 1803 13315 13677 54869;54870 54870 TPPAPSPFDLPELK 14 1 0 Unmodified _TPPAPSPFDLPELK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 758.9101 2 754.903399 1507.79225 71443.88 0.94266 0.00071162 0.070684 5.336E-05 1.0133 0.00076498 754.903150659106 758.910236448348 123.13 0.59052 123.13 122.79 123.38 0 110 27 6 0 0 0 0.00013865 2 73517 78.692 72.159 1 1.9876 1.5939 0 8246700 2817200 5429600 35123 1803 13315 13677 54871;54872 54871 TPPAPSPFDLPELK 14 1 0 Unmodified _TPPAPSPFDLPELK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 758.9107 2 754.903399 1507.79225 71220.77 0.87863 0.00066328 0.19632 0.0001482 1.0749 0.00081148 754.903307192511 758.910114413389 122.99 0.55918 122.99 122.63 123.19 7.6294E-06 112 27 7 0 0 0 0.00016831 2 72485 73.848 67.315 1 1.9253 1.5709 0 6148700 1827100 4321600 35124 1803 13315 13677 54873;54874 54873 TPPLITDYR 9 0 1 Unmodified _TPPLITDYR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.2933 2 538.292756 1074.57096 81509.14 0.71793 0.00038646 -0.13346 -7.1838E-05 0.58448 0.00031462 538.292720443401 543.296776454608 68.137 2.4749 68.137 66.768 69.243 0 1190 209 9 0 0 0 1.3003E-05 4 39415 124.23 105.91 1 0.70311 0.8344 0 732220000 432220000 300000000 35125 1471 13316 13678 54875;54876;54877;54878 54876 TPPLITDYR 9 0 1 Unmodified _TPPLITDYR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.2932 2 538.292756 1074.57096 80566.77 0.49956 0.00026891 0.3439 0.00018512 0.84346 0.00045403 538.292762450489 543.296855312608 66.848 1.9939 66.848 65.529 67.523 0 1091 167 10 0 0 0 6.7382E-06 3 39535 130.75 116.59 1 0.82368 0.96527 0 728810000 391890000 336920000 35126 1471 13316 13678 54879;54880;54881 54880 TPPLITDYR 9 0 1 Unmodified _TPPLITDYR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.2929 2 538.292756 1074.57096 80370.29 0.46704 0.0002514 -0.1575 -8.4779E-05 0.30954 0.00016662 538.292927598953 543.296729287261 77.728 2.8589 77.728 76.827 79.686 0 1003 183 11 0 0 0 0.013268 4 41904 56.729 56.729 1 1.2703 1.1031 0 225680000 99333000 126350000 35127 1471 13316 13678 54882;54883;54884;54885 54884 TPPLITDYR 9 0 1 Unmodified _TPPLITDYR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.293 2 538.292756 1074.57096 81573.08 0.59085 0.00031805 -0.16895 -9.0944E-05 0.4219 0.0002271 538.292912695334 543.296732371761 78.003 2.5805 78.003 77.131 79.711 0 959 166 11 0 0 0 0.0049382 5 41259 67.993 67.993 1 1.2246 1.0696 0 207310000 92157000 115150000 35128 1471 13316 13678 54886;54887;54888;54889;54890 54889 TPQAPASANLVGPR 14 0 1 Unmodified _TPQAPASANLVGPR_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8743 2 689.875508 1377.73646 NaN NaN NaN -1.6607 -0.0011457 NaN NaN NaN NaN 53.375 0.30901 53.375 53.2 53.509 0 0 0 0 1.1931E-06 1 29795 103.08 84.303 1 NaN NaN 0 16500000 16500000 0 35129 619 13317 13679 54891 54891 TPQAPASANLVGPR 14 0 1 Unmodified _TPQAPASANLVGPR_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.8809 2 689.875508 1377.73646 NaN NaN NaN 1.4794 0.0010206 NaN NaN NaN NaN 53.379 0.31416 53.379 53.178 53.492 0 0 0 0 0.00072171 1 29803 77.062 49.733 1 NaN NaN 0 16198000 0 16198000 35130 619 13317 13679 54892 54892 TPQAPASANLVGPR 14 0 1 Unmodified _TPQAPASANLVGPR_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8747 2 689.875508 1377.73646 74281.49 0.70773 0.00048824 -0.076404 -5.2709E-05 0.63132 0.00043553 689.875381641382 694.880239350714 52.272 0.46653 52.272 52.017 52.484 0 184 35 8 0 0 0 0.00014072 2 29668 78.342 71.682 1 1.4597 1.5227 0 22394000 8687500 13707000 35131 619 13317 13679 54893;54894 54893 TPQEAITDGLEIVVSPR 17 0 1 Unmodified _TPQEAITDGLEIVVSPR_ 0 0 0 X6RFN3;Q99496 X6RFN3 X6RFN3 RNF2 E3 ubiquitin-protein ligase RING2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 913.4928 2 912.988723 1823.96289 62844.97 0.41655 0.00038031 0.56799 0.00051857 0.98454 0.00089887 913.490479021244 918.495004626708 115.39 0.74826 115.39 115.01 115.76 0 217 50 8 0 0 0 0.0067848 1 73302 45.79 40.989 1 0.65126 0.65506 0 17367000 11609000 5758500 35132 1992 13318 13680 54895 54895 TPQEAITDGLEIVVSPR 17 0 1 Unmodified _TPQEAITDGLEIVVSPR_ 0 0 0 X6RFN3;Q99496 X6RFN3 X6RFN3 RNF2 E3 ubiquitin-protein ligase RING2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 917.9932 2 912.988723 1823.96289 62621.54 0.71997 0.00065733 0.2358 0.00021528 0.95577 0.00087261 913.49082859613 917.993492188205 114.82 0.74101 114.82 114.3 115.04 -7.6294E-06 215 46 8 0 0 0 3.9968E-07 3 74690 96.464 87.414 1 0.79005 0.7915 0 18487000 8529700 9957200 35133 1992 13318 13680 54896;54897;54898 54897 TPQEAITDGLEIVVSPR 17 0 1 Unmodified _TPQEAITDGLEIVVSPR_ 0 0 0 X6RFN3;Q99496 X6RFN3 X6RFN3 RNF2 E3 ubiquitin-protein ligase RING2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 913.4912 2 912.988723 1823.96289 NaN NaN NaN 0.43285 0.00039519 NaN NaN NaN NaN 127.08 0.53734 127.08 126.83 127.37 0 0 0 0 0.0074141 1 76541 65.511 43.638 1 NaN NaN 0 2893300 2893300 0 35134 1992 13318 13680 54899 54899 TPQGAVPAYLLDR 13 0 1 Unmodified _TPQGAVPAYLLDR_ 0 0 0 Q5J7U2;O95478;A0A0A0MQZ6 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8804 2 700.880259 1399.74596 73060.93 0.57888 0.00040572 0.13598 9.5305E-05 0.71486 0.00050103 701.381417012737 705.884840146682 88.282 0.97469 88.282 87.868 88.843 0 418 77 7 0 0 0 9.7672E-09 3 53029 115.33 115.33 1 1.0049 1.118 0 77211000 38905000 38306000 35135 1427 13319 13681 54900;54901;54902 54900 TPQGAVPAYLLDR 13 0 1 Unmodified _TPQGAVPAYLLDR_ 0 0 0 Q5J7U2;O95478;A0A0A0MQZ6 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3825 2 700.880259 1399.74596 72931.09 0.68602 0.00048082 0.098961 6.936E-05 0.78498 0.00055018 700.880274797305 705.884829772133 87.499 1.0083 87.499 86.863 87.871 0 332 81 8 0 0 0 4.974E-05 2 53838 96.756 77.976 1 0.96761 1.1198 0 56945000 28897000 28047000 35136 1427 13319 13681 54903;54904 54903 TPQGAVPAYLLDR 13 0 1 Unmodified _TPQGAVPAYLLDR_ 0 0 0 Q5J7U2;O95478;A0A0A0MQZ6 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.8849 2 700.880259 1399.74596 71971.2 0.49138 0.0003444 -0.56446 -0.00039562 -0.073072 -5.1215E-05 700.879048691865 705.884531667338 101.26 1.1479 101.26 100.8 101.94 -7.6294E-06 412 77 8 0 0 0 0.00014979 2 57181 88.441 77.29 1 1.1168 0.92862 0 21604000 10046000 11558000 35137 1427 13319 13681 54905;54906 54906 TPQGAVPAYLLDR 13 0 1 Unmodified _TPQGAVPAYLLDR_ 0 0 0 Q5J7U2;O95478;A0A0A0MQZ6 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.8842 2 700.880259 1399.74596 71525.7 0.46063 0.00032284 -0.47742 -0.00033461 -0.016791 -1.1768E-05 700.879046200649 705.884658280331 101.1 0.93842 101.1 100.67 101.61 0 385 61 8 0 0 0 0.00015103 2 56221 88.338 78.683 1 1.1157 0.95942 0 21754000 10452000 11303000 35138 1427 13319 13681 54907;54908 54908 TPQQLWYTHEK 11 1 0 Unmodified _TPQQLWYTHEK_ 0 0 0 E9PKP7;P17480;B4DNQ1;O00164;Q05BZ1 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.5736 3 477.573614 1429.69901 88062.46 0.21526 0.0001028 0.024824 1.1855E-05 0.24008 0.00011466 477.573592183981 480.245121583785 42.063 0.80992 42.063 41.726 42.536 0 250 60 6 0 0 0 0.0038372 2 22158 38.3 38.3 1 0.63791 0.71123 0 61891000 37164000 24727000 35139 1244 13320 13682 54909;54910 54910 TPQQLWYTHEK 11 1 0 Unmodified _TPQQLWYTHEK_ 0 0 0 E9PKP7;P17480;B4DNQ1;O00164;Q05BZ1 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.5733 3 477.573614 1429.69901 87957.34 0.31205 0.00014903 -0.15109 -7.2156E-05 0.16096 7.687E-05 477.573451508653 480.244882946942 41.055 0.81803 41.055 40.694 41.512 0 287 65 6 0 0 0 0.0012613 2 21972 45.891 45.891 1 0.67195 0.74235 0 44619000 25502000 19116000 35140 1244 13320 13682 54911;54912 54912 TPQQLWYTHEK 11 1 0 Unmodified _TPQQLWYTHEK_ 0 0 0 E9PKP7;P17480;B4DNQ1;O00164;Q05BZ1 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.8566 2 715.856783 1429.69901 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.025 1 41.025 40.525 41.525 0 0 0 0 0.019827 1 22015 53.597 45.292 1 35141 1244 13320 13682 54913 54913 TPQQLWYTHEK 11 1 0 Unmodified _TPQQLWYTHEK_ 0 0 0 E9PKP7;P17480;B4DNQ1;O00164;Q05BZ1 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.5789 3 477.573614 1429.69901 86525.26 0.032203 1.5379E-05 0.08104 3.8703E-05 0.11324 5.4082E-05 477.573574766531 480.24495237528 48.83 0.97298 48.83 48.497 49.47 0 351 77 8 0 0 0 0.020072 2 23741 27.409 27.409 1 1.3778 1.0767 0 16195000 6418900 9775900 35142 1244 13320 13682 54914;54915 54914 TPQQLWYTHEK 11 1 0 Unmodified _TPQQLWYTHEK_ 0 0 0 E9PKP7;P17480;B4DNQ1;O00164;Q05BZ1 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.5792 3 477.573614 1429.69901 87322.83 0.025264 1.2065E-05 -0.092701 -4.4272E-05 -0.067437 -3.2206E-05 477.573505897081 480.244890040792 48.972 0.88738 48.972 48.661 49.548 -3.8147E-06 331 67 8 0 0 0 0.031537 1 23214 21.55 21.55 1 1.4486 1.1636 0 15354000 6870100 8484200 35143 1244 13320 13682 54916 54916 TPQQLWYTHEK 11 1 0 Unmodified _TPQQLWYTHEK_ 0 0 0 E9PKP7;P17480;B4DNQ1;O00164;Q05BZ1 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 715.8567 2 715.856783 1429.69901 71992.77 0.35102 0.00025128 0.12534 8.9722E-05 0.47636 0.000341 715.856446878653 719.863816743553 48.989 0.46192 48.989 48.734 49.195 0 161 34 6 0 0 0 0.0082379 3 23323 51.162 51.162 1 1.4563 1.1484 0 3898300 1535100 2363200 35144 1244 13320 13682 54917;54918;54919 54918 TPRPLTSAR 9 0 2 Unmodified _TPRPLTSAR_ 0 0 1 Q6PJJ2;P56182;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 333.5295 3 333.529569 997.566878 103383.6 0.017092 5.7007E-06 -0.3184 -0.0001062 -0.30131 -0.0001005 333.529400500829 340.20162341745 18.534 0.43378 18.534 18.311 18.745 0 58 17 5 0 0 0 0.0030558 1 5198 63.734 45.915 1 0.77626 0.80389 0 12722000 6576100 6145800 35145 1618 13321 13683 54920 54920 TPSASILEEPLTEQNHADCLDSAGPR 26 0 1 Unmodified _TPSASILEEPLTEQNHADCLDSAGPR_ 0 0 0 B2RWP5;Q96L73;Q96MN8;Q96DQ7;Q8NB95 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 940.1125 3 936.77501 2807.3032 61843.29 0.62178 0.00058247 -0.98029 -0.00091831 -0.35851 -0.00033584 937.109127180954 940.444289138342 104.45 0.45914 104.45 104.23 104.69 -7.6294E-06 111 27 6 0 0 0 0.0066008 2 59444 22.533 20.603 1 2.1211 1.7802 0 3132400 1561000 1571400 35146 898 13322 13684 54921;54922 54922 TPSASILEEPLTEQNHADCLDSAGPR 26 0 1 Unmodified _TPSASILEEPLTEQNHADCLDSAGPR_ 0 0 0 B2RWP5;Q96L73;Q96MN8;Q96DQ7;Q8NB95 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 940.7794 3 936.77501 2807.3032 62072.55 0.42993 0.00040275 -0.44755 -0.00041925 -0.017619 -1.6505E-05 937.110135556785 940.444619204311 104.18 0.35146 104.18 104.05 104.4 0 100 23 6 0 0 0 0.0036683 1 58407 23.44 23.44 1 2.4393 2.0933 0 3346400 767200 2579200 35147 898 13322 13684 54923 54923 TPSGLLINSELEK 13 1 0 Unmodified _TPSGLLINSELEK_ 0 0 0 Q03164;E9PR05;Q9UPD0;Q9Y6P1 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8872 2 700.885207 1399.75586 71802.52 0.81361 0.00057024 0.84997 0.00059573 1.6636 0.001166 700.88549023336 704.893398453689 85.045 0.56403 85.045 84.764 85.328 0 204 47 6 0 0 0 1.1619E-18 1 50986 140.57 100.63 1 1.2474 1.3488 0 36341000 15825000 20516000 35148 1680 13323 13685 54924 54924 TPSGLLINSELEK 13 1 0 Unmodified _TPSGLLINSELEK_ 0 0 0 Q03164;E9PR05;Q9UPD0;Q9Y6P1 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.8926 2 700.885207 1399.75586 73588.15 1.0222 0.00071643 0.5209 0.00036509 1.5431 0.0010815 700.885415938536 704.892825517986 83.927 0.60187 83.927 83.741 84.343 0 186 49 6 0 0 0 2.8042E-13 2 51452 125.97 91.25 1 0.91463 0.9917 0 39015000 20671000 18344000 35149 1680 13323 13685 54925;54926 54925 TPSGLLINSELEK 13 1 0 Unmodified _TPSGLLINSELEK_ 0 0 0 Q03164;E9PR05;Q9UPD0;Q9Y6P1 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.8926 2 700.885207 1399.75586 72860.66 0.76909 0.00053905 0.16676 0.00011688 0.93585 0.00065593 700.885360629877 704.892267592338 97.554 0.58712 97.554 97.203 97.79 -7.6294E-06 172 32 7 0 0 0 5.7593E-05 1 54898 96.103 84.044 1 1.8632 1.4945 0 8207400 2402000 5805400 35150 1680 13323 13685 54927 54927 TPSLTVFLLGQSAR 14 0 1 Unmodified _TPSLTVFLLGQSAR_ 0 0 0 P24928;A0A087WWE2;B4DET1 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.4269 2 745.422291 1488.83003 73726.82 1.0363 0.00077247 0.10044 7.4873E-05 1.1367 0.00084735 745.422035357021 750.426420478909 119.34 0.4034 119.34 119.11 119.51 7.6294E-06 97 26 5 0 0 0 0.0041665 1 76630 45.915 45.915 1 1.2111 1.231 0 7399100 3505200 3893900 35151 1514 13324 13686 54928 54928 TPSLTVFLLGQSAR 14 0 1 Unmodified _TPSLTVFLLGQSAR_ 0 0 0 P24928;A0A087WWE2;B4DET1 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.9249 2 745.422291 1488.83003 73203.17 0.74823 0.00055775 -0.095264 -7.1012E-05 0.65297 0.00048674 745.422302339951 750.92737335706 118.74 0.47074 118.74 118.51 118.98 0 100 29 6 0 0 0 6.5956E-05 2 78149 90.653 90.653 1 0.88764 0.89658 0 9473200 4805600 4667600 35152 1514 13324 13686 54929;54930 54930 TPSLTVFLLGQSAR 14 0 1 Unmodified _TPSLTVFLLGQSAR_ 0 0 0 P24928;A0A087WWE2;B4DET1 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.4272 2 745.422291 1488.83003 73688.41 0.87336 0.00065102 0.38338 0.00028578 1.2567 0.0009368 745.421601881656 750.426612111329 131.61 0.39948 131.61 131.43 131.83 0 68 18 6 0 0 0 0.013994 1 79969 35.645 35.645 1 1.0433 0.92341 0 1347100 592610 754540 35153 1514 13324 13686 54931 54931 TPSLTVFLLGQSAR 14 0 1 Unmodified _TPSLTVFLLGQSAR_ 0 0 0 P24928;A0A087WWE2;B4DET1 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 745.9243 2 745.422291 1488.83003 72922.09 0.93019 0.00069338 0.11075 8.2554E-05 1.0409 0.00077594 745.422396759037 750.426291196064 131.43 0.45 131.43 131.2 131.65 0 52 18 4 0 0 0 0.0012966 1 78863 54.7 50.361 1 1.0085 0.87196 0 1635700 861540 774200 35154 1514 13324 13686 54932 54932 TPSSDVLVFDYTK 13 1 0 Unmodified _TPSSDVLVFDYTK_ 0 0 0 Q09028;H0YF10;Q6FHQ0;Q16576;E9PC52;Q5JP01 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.3787 2 736.369389 1470.72423 70354.94 0.95909 0.00070624 0.034801 2.5626E-05 0.99389 0.00073187 736.369468094255 740.376423902375 95.828 1.2248 95.828 95.352 96.577 0 688 105 9 0 0 0 4.5509E-24 4 58120 160.67 160.67 1 0.917 1.0851 0 425170000 222510000 202660000 35155 1771;1695 13325 13687 54933;54934;54935;54936 54934 TPSSDVLVFDYTK 13 1 0 Unmodified _TPSSDVLVFDYTK_ 0 0 0 Q09028;H0YF10;Q6FHQ0;Q16576;E9PC52;Q5JP01 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.3694 2 736.369389 1470.72423 70664.73 0.88631 0.00065265 -0.086038 -6.3356E-05 0.80027 0.00058929 736.369320635421 740.376305506202 95.149 1.2791 95.149 94.564 95.843 0 699 107 9 0 0 0 8.4736E-61 4 58984 203.83 203.83 1 0.9151 1.0774 0 447940000 234910000 213030000 35156 1771;1695 13325 13687 54937;54938;54939;54940 54938 TPSSDVLVFDYTK 13 1 0 Unmodified _TPSSDVLVFDYTK_ 0 0 0 Q09028;H0YF10;Q6FHQ0;Q16576;E9PC52;Q5JP01 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.3775 2 736.369389 1470.72423 70401.66 0.79659 0.00058659 0.12472 9.1842E-05 0.92132 0.00067843 736.36956709174 740.376455178586 108.95 1.4563 108.95 108.44 109.89 7.6294E-06 470 71 13 0 0 0 1.8649E-23 3 62502 152.85 144.93 1 1.6967 1.4679 0 115290000 43062000 72229000 35157 1771;1695 13325 13687 54941;54942;54943 54941 TPSSDVLVFDYTK 13 1 0 Unmodified _TPSSDVLVFDYTK_ 0 0 0 Q09028;H0YF10;Q6FHQ0;Q16576;E9PC52;Q5JP01 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 740.3768 2 736.369389 1470.72423 70128.66 0.73709 0.00054277 0.094137 6.932E-05 0.83123 0.00061209 736.369494084984 740.376440536675 108.82 1.2525 108.82 108.44 109.69 0 453 60 12 0 0 0 1.5142E-30 3 61549 172.17 172.17 1 1.7637 1.5053 0 99507000 34689000 64818000 35158 1771;1695 13325 13687 54944;54945;54946 54945 TPTCQSSTDCSPYAR 15 0 1 Unmodified _TPTCQSSTDCSPYAR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 870.8647 2 865.859068 1729.70358 65100.48 0.85726 0.00074227 -0.6497 -0.00056255 0.20756 0.00017972 865.85877060193 870.862862472633 23.999 0.40272 23.999 23.789 24.192 0 106 19 10 0 0 0 4.3477E-49 2 9727 188.29 181.8 1 0.61876 0.65178 0 40016000 24387000 15629000 35159 1421 13326 13688 54947;54948 54948 TPTCQSSTDCSPYAR 15 0 1 Unmodified _TPTCQSSTDCSPYAR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.8599 2 865.859068 1729.70358 65018.11 0.42732 0.00037 -0.2905 -0.00025153 0.13683 0.00011847 865.859107614527 870.863366978727 23.743 0.36213 23.743 23.57 23.932 0 77 13 8 0 0 0 8.4492E-71 2 9516 208.08 205.57 1 0.62106 0.67881 0 36272000 23039000 13234000 35160 1421 13326 13688 54949;54950 54949 TPTCQSSTDCSPYAR 15 0 1 Unmodified _TPTCQSSTDCSPYAR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 871.3655 2 865.859068 1729.70358 63454.57 0.39581 0.00034271 -0.28935 -0.00025054 0.10646 9.2178E-05 865.859229056405 870.863269472501 26.997 0.55018 26.997 26.742 27.292 0 221 28 12 0 0 0 2.9031E-06 2 10297 98.337 95.925 1 1.1217 0.95832 0 38444000 17379000 21065000 35161 1421 13326 13688 54951;54952 54952 TPTCQSSTDCSPYAR 15 0 1 Unmodified _TPTCQSSTDCSPYAR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 870.8635 2 865.859068 1729.70358 63881.19 0.038049 3.2945E-05 -0.15085 -0.00013062 -0.1128 -9.7671E-05 865.859351274392 870.863431614252 27.213 0.66416 27.213 27 27.664 0 193 26 12 0 0 0 2.5553E-30 2 9959 151.78 149.27 1 1.0782 0.94051 0 30129000 14259000 15870000 35162 1421 13326 13688 54953;54954 54954 TPTQLEGATR 10 0 1 Unmodified _TPTQLEGATR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.2874 2 537.28292 1072.55129 83627.62 0.62641 0.00033656 -0.49752 -0.00026731 0.12888 6.9247E-05 537.282757710341 542.286725491426 25.341 0.51403 25.341 25.161 25.675 1.9073E-06 128 26 9 0 0 0 1.0921E-09 2 10920 133.32 80.606 1 0.83675 0.96785 0 163410000 88043000 75363000 35163 168 13327 13689 54955;54956 54955 TPTQLEGATR 10 0 1 Unmodified _TPTQLEGATR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.2865 2 537.28292 1072.55129 83772.21 0.81128 0.00043588 -0.58968 -0.00031682 0.2216 0.00011906 537.2826390852 542.286831717198 25.143 0.43618 25.143 24.938 25.374 1.9073E-06 95 16 9 0 0 0 3.3525E-40 1 10750 192.26 100.36 1 0.81692 0.93289 0 148120000 79686000 68433000 35164 168 13327 13689 54957 54957 TPTQLEGATR 10 0 1 Unmodified _TPTQLEGATR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.287 2 537.28292 1072.55129 84249.87 0.54497 0.0002928 -0.1674 -8.9942E-05 0.37756 0.00020286 537.28283784743 542.286885854017 28.162 0.64506 28.162 27.785 28.43 0 163 31 9 0 0 0 0.0043789 2 11127 61.593 40.13 1 1.955 1.5943 0 14952000 5240300 9711800 35165 168 13327 13689 54958;54959 54958 TPTQLEGATR 10 0 1 Unmodified _TPTQLEGATR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 542.2872 2 537.28292 1072.55129 83006.95 0.20072 0.00010784 -0.31867 -0.00017122 -0.11795 -6.3374E-05 537.282684484944 542.28684806865 28.273 0.48586 28.273 28.019 28.505 -1.9073E-06 95 21 8 0 0 0 7.8128E-05 2 10717 98.055 56.319 1 1.7134 1.4395 0 17071000 6271200 10800000 35166 168 13327 13689 54960;54961 54960 TPTQTNGSNVPFK 13 1 0 Unmodified _TPTQTNGSNVPFK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.8591 2 695.851698 1389.68884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.29 1 39.29 38.79 39.79 0 0 0 0 0.0012494 1 20343 75.416 62.46 1 35167 789 13328 13690 54962 54962 TPTQTNGSNVPFK 13 1 0 Unmodified _TPTQTNGSNVPFK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.8589 2 695.851698 1389.68884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.369 1 38.369 37.869 38.869 0 0 0 0 0.021259 1 20138 46.73 29.892 1 35168 789 13328 13690 54963 54963 TPTSSPASSPLVAK 14 1 0 Unmodified _TPTSSPASSPLVAK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.871 2 671.864274 1341.714 74245.91 0.74907 0.00050327 -0.059447 -3.994E-05 0.68962 0.00046333 671.864258210437 675.871182967468 42.492 0.48847 42.492 42.305 42.794 0 182 39 6 0 0 0 1.8578E-29 2 22533 151.79 131.8 1 1.0854 1.1835 0 49961000 23512000 26449000 35169 1740 13329 13691 54964;54965 54965 TPTSSPASSPLVAK 14 1 0 Unmodified _TPTSSPASSPLVAK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.8655 2 671.864274 1341.714 75203.59 0.60182 0.00040434 0.16709 0.00011226 0.76891 0.0005166 671.864413486005 675.871305402575 41.953 0.60344 41.953 41.655 42.258 0 253 55 6 0 0 0 4.5083E-10 2 22456 123.67 105.81 1 1.0733 1.09 0 29936000 14411000 15525000 35170 1740 13329 13691 54966;54967 54967 TPTSSPASSPLVAK 14 1 0 Unmodified _TPTSSPASSPLVAK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.8731 2 671.864274 1341.714 74825.72 0.42472 0.00028535 0.16163 0.0001086 0.58635 0.00039395 671.864349052621 675.871451572835 49.117 0.68395 49.117 48.775 49.459 0 247 55 7 0 0 0 3.1308E-06 2 23891 103.44 90.086 1 1.4026 1.1207 0 9065100 4124700 4940400 35171 1740 13329 13691 54968;54969 54968 TPTSSPASSPLVAK 14 1 0 Unmodified _TPTSSPASSPLVAK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.8715 2 671.864274 1341.714 NaN NaN NaN 0.20689 0.000139 NaN NaN NaN NaN 49.374 0.67235 49.374 49.088 49.76 -3.8147E-06 0 0 0 0.022095 1 23450 43.897 32.049 1 NaN NaN 0 6291700 0 6291700 35172 1740 13329 13691 54970 54970 TPTTTPPETQQSPHLSLK 18 1 0 Unmodified _TPTTTPPETQQSPHLSLK_ 0 0 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.0111 3 655.009217 1962.00582 NaN NaN NaN 1.3835 0.00090623 NaN NaN NaN NaN 54.241 0.1599 54.241 54.198 54.358 0 0 0 0 0.021164 1 30445 28.611 11.533 1 NaN NaN 0 9252400 9252400 0 35173 1075 13330 13692 54971 54971 TPTTTPPETQQSPHLSLK 18 1 0 Unmodified _TPTTTPPETQQSPHLSLK_ 0 0 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.0088 3 655.009217 1962.00582 74459.93 0.44223 0.00028966 -0.037072 -2.4282E-05 0.40515 0.00026538 655.343515735341 657.680491170308 63.526 0.46948 63.526 63.296 63.765 0 205 40 8 0 0 0 2.0042E-05 1 32687 37.157 37.157 1 1.939 1.5452 0 6787500 2121500 4666000 35174 1075 13330 13692 54972 54972 TPTTTPPETQQSPHLSLK 18 1 0 Unmodified _TPTTTPPETQQSPHLSLK_ 0 0 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.681 3 655.009217 1962.00582 74679.79 0.35462 0.00023228 0.28207 0.00018476 0.63669 0.00041704 655.343317525738 657.68055208631 64.101 0.62803 64.101 63.818 64.446 -7.6294E-06 237 51 7 0 0 0 1.9138E-05 2 32219 47.916 47.916 1 1.7493 1.4332 0 4982100 1978600 3003500 35175 1075 13330 13692 54973;54974 54973 TPTVIHK 7 1 0 Unmodified _TPTVIHK_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 402.2465 2 398.239796 794.465038 96622.24 -0.23507 -9.3613E-05 -0.83918 -0.0003342 -1.0742 -0.00042781 398.239083426197 402.246646542775 17.866 0.24739 17.866 17.78 18.027 0 38 11 6 0 0 0 0.037867 1 5002 60.648 41.086 1 1.5234 1.5236 0 26604000 10770000 15835000 35176 1183 13331 13693 54975 54975 TPVEEVPAAIAPFQGR 16 0 1 Unmodified _TPVEEVPAAIAPFQGR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.9518 2 841.449037 1680.88352 66010.48 0.82003 0.00069001 0.21334 0.00017952 1.0334 0.00086953 841.448915476156 846.453037597428 101.31 0.65964 101.31 100.97 101.63 0 268 51 8 0 0 0 0.00015202 1 62154 93.561 87.589 1 1.2449 1.2886 0 23185000 10948000 12237000 35177 764 13332 13694 54976 54976 TPVEEVPAAIAPFQGR 16 0 1 Unmodified _TPVEEVPAAIAPFQGR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 841.9518 2 841.449037 1680.88352 66844.26 0.75081 0.00063177 -0.10188 -8.5727E-05 0.64893 0.00054604 841.950239650133 846.452891563953 100.6 0.60409 100.6 100.34 100.94 0 265 48 8 0 0 0 0.00015166 1 63249 89.266 89.266 1 1.2889 1.4013 0 28598000 12643000 15955000 35178 764 13332 13694 54977 54977 TPVEEVPAAIAPFQGR 16 0 1 Unmodified _TPVEEVPAAIAPFQGR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 846.4549 2 841.449037 1680.88352 65755.12 1.0228 0.00086062 -0.24096 -0.00020276 0.78182 0.00065786 841.950531708362 846.954678353479 113.46 0.71484 113.46 113.11 113.82 7.6294E-06 134 35 8 0 0 0 3.9176E-06 2 66111 87.667 81.696 1 0.96643 0.83133 0 6939700 3313200 3626500 35179 764 13332 13694 54978;54979 54979 TPVEEVPAAIAPFQGR 16 0 1 Unmodified _TPVEEVPAAIAPFQGR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 846.4559 2 841.449037 1680.88352 66150.42 0.66635 0.0005607 0.017162 1.4441E-05 0.68351 0.00057514 841.449200019888 846.453312102823 113.31 0.50639 113.31 113.1 113.61 -7.6294E-06 116 24 7 0 0 0 0.0014219 2 65080 45.257 38.96 1 0.93076 0.77243 0 5078100 2312400 2765700 35180 764 13332 13694 54980;54981 54981 TPVEPEVAIHR 11 0 1 Unmodified _TPVEPEVAIHR_ 0 0 0 P60866;E5RIP1;E5RJX2 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.3452 2 624.340769 1246.66699 76396.5 0.6141 0.00038341 0.89455 0.00055851 1.5087 0.00094192 624.341204917081 629.34549900513 43.475 0.36635 43.475 43.179 43.545 0 119 31 6 0 0 0 3.8072E-05 1 23157 99.815 81.375 1 1.1915 1.3428 0 98468000 52464000 46004000 35181 1625 13333 13695 54982 54982 TPVEPEVAIHR 11 0 1 Unmodified _TPVEPEVAIHR_ 0 0 0 P60866;E5RIP1;E5RJX2 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.3456 2 624.340769 1246.66699 76648.62 0.85861 0.00053606 -0.2463 -0.00015378 0.6123 0.00038229 624.340544429401 629.344684728182 43.61 0.52819 43.61 43.435 43.964 0 191 46 8 0 0 0 0.023549 1 23522 42.19 34.818 1 1.0865 1.245 0 132970000 65932000 67042000 35182 1625 13333 13695 54983 54983 TPVEPEVAIHR 11 0 1 Unmodified _TPVEPEVAIHR_ 0 0 0 P60866;E5RIP1;E5RJX2 P60866 P60866 RPS20 40S ribosomal protein S20 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.3408 2 624.340769 1246.66699 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.35 1 43.35 42.85 43.85 0 0 0 0 2.6547E-06 1 23187 99.815 48.749 1 35183 1625 13333 13695 54984 54984 TPVEPEVAIHR 11 0 1 Unmodified _TPVEPEVAIHR_ 0 0 0 P60866;E5RIP1;E5RJX2 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.5632 3 416.562938 1246.66699 92680.54 0.51534 0.00021467 0.42279 0.00017612 0.93814 0.00039079 416.563122986955 419.899210919611 42.654 0.896 42.654 42.413 43.309 0 457 74 10 0 0 0 1.4432E-17 2 22944 123.38 115.84 1 1.1006 1.2961 0 1082000000 471150000 610810000 35184 1625 13333 13695 54985;54986 54986 TPVEPEVAIHR 11 0 1 Unmodified _TPVEPEVAIHR_ 0 0 0 P60866;E5RIP1;E5RJX2 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.3412 2 624.340769 1246.66699 77392.68 0.90015 0.000562 0.23576 0.00014719 1.1359 0.0007092 624.340912540696 629.344903090982 42.656 0.52868 42.656 42.437 42.966 0 230 43 8 0 0 0 1.1046E-12 2 23040 145.72 137.26 1 1.2472 1.4458 0 303490000 138650000 164840000 35185 1625 13333 13695 54987;54988 54988 TPVEPEVAIHR 11 0 1 Unmodified _TPVEPEVAIHR_ 0 0 0 P60866;E5RIP1;E5RJX2 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.3455 2 624.340769 1246.66699 77624.2 0.46752 0.00029189 0.47382 0.00029582 0.94134 0.00058772 624.340846021274 629.345085492661 50.237 0.59036 50.237 49.975 50.566 0 226 50 6 0 0 0 0.0075017 1 24548 52.49 39.962 1 1.2223 1.0505 0 6516500 3237000 3279400 35186 1625 13333 13695 54989 54989 TPVEPEVAIHR 11 0 1 Unmodified _TPVEPEVAIHR_ 0 0 0 P60866;E5RIP1;E5RJX2 P60866 P60866 RPS20 40S ribosomal protein S20 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.3409 2 624.340769 1246.66699 77689.41 0.27082 0.00016909 0.35554 0.00022198 0.62636 0.00039107 624.340852971724 629.34505109702 50.465 0.61559 50.465 50.211 50.827 3.8147E-06 224 49 6 0 0 0 0.030651 1 24230 38.567 27.077 1 1.2151 1.0266 0 4724000 2138600 2585400 35187 1625 13333 13695 54990 54990 TPVEVPVGGFK 11 1 0 Unmodified _TPVEVPVGGFK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.3167 2 565.316232 1128.61791 79802.46 0.75643 0.00042762 0.67387 0.00038095 1.4303 0.00080858 565.31654516323 569.323480235842 90.805 0.41948 90.805 90.543 90.962 -7.6294E-06 115 23 6 0 0 0 0.0011937 2 50387 69.375 69.375 1 2.5786 2.0388 0 6141100 1640800 4500200 35188 1754 13334 13696 54991;54992 54992 TPVEVPVGGFK 11 1 0 Unmodified _TPVEVPVGGFK_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.3237 2 565.316232 1128.61791 81513.35 0.40979 0.00023166 0.030237 1.7093E-05 0.44003 0.00024876 565.316138239978 569.323235352608 90.673 0.46652 90.673 90.398 90.865 0 119 24 7 0 0 0 0.0038081 1 49386 59.153 59.153 1 2.5605 2.0872 0 6579100 1596600 4982500 35189 1754 13334 13696 54993 54993 TPVPSDIDISR 11 0 1 Unmodified _TPVPSDIDISR_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.3217 2 600.31696 1198.61937 76805.63 0.59748 0.00035868 -0.31977 -0.00019196 0.27771 0.00016672 600.316065884479 605.321291650027 67.514 0.7476 67.514 67.07 67.817 7.6294E-06 206 62 5 0 0 0 1.5071E-06 1 38948 112.13 91.991 1 1.62 1.6712 0 24190000 9662600 14527000 35190 196 13335 13697 54994 54994 TPVPSDIDISR 11 0 1 Unmodified _TPVPSDIDISR_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.3211 2 600.31696 1198.61937 77732.49 0.72593 0.00043579 -0.24047 -0.00014436 0.48546 0.00029143 600.316447192516 605.320970453399 66.391 0.49587 66.391 66.185 66.681 0 148 39 5 0 0 0 0.00040176 1 39184 81.338 62.799 1 1.6947 1.8468 0 29368000 11602000 17767000 35191 196 13335 13697 54995 54995 TPVQYSQQQNSPQK 14 1 0 Unmodified _TPVQYSQQQNSPQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.9104 2 816.902451 1631.79035 67479.5 0.42855 0.00035008 0.11713 9.5686E-05 0.54568 0.00044577 816.902515088284 820.909710897105 20.772 0.40525 20.772 20.627 21.033 0 97 17 9 0 0 0 4.0718E-251 2 7134 317.15 317.15 1 1.8937 2.1405 0 83804000 29998000 53806000 35192 1569 13336 13698 54996;54997 54997 TPVQYSQQQNSPQK 14 1 0 Unmodified _TPVQYSQQQNSPQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.9103 2 816.902451 1631.79035 68036.64 0.84866 0.00069327 0.065123 5.3199E-05 0.91379 0.00074647 816.902599644348 820.909614614561 20.708 0.43918 20.708 20.54 20.98 0 70 15 10 0 0 0 0 2 6930 388.54 388.54 1 1.9052 2.1306 0 86059000 29663000 56396000 35193 1569 13336 13698 54998;54999 54998 TPVQYSQQQNSPQK 14 1 0 Unmodified _TPVQYSQQQNSPQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.91 2 816.902451 1631.79035 66679.02 0.45262 0.00036974 0.26276 0.00021465 0.71538 0.0005844 816.902876199554 820.909847287351 22.907 0.55783 22.907 22.67 23.228 0 150 23 10 0 0 0 4.3206E-05 2 7446 94.122 94.122 1 3.8725 3.1831 0 38737000 8186700 30550000 35194 1569 13336 13698 55000;55001 55000 TPVQYSQQQNSPQK 14 1 0 Unmodified _TPVQYSQQQNSPQK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.91 2 816.902451 1631.79035 67467.05 0.447 0.00036515 0.14054 0.00011481 0.58754 0.00047996 816.902724893428 820.909779227573 22.929 0.69448 22.929 22.702 23.396 1.9073E-06 176 29 11 0 0 0 8.2604E-115 2 7041 248.19 248.19 1 3.8077 3.1418 0 30546000 6561500 23985000 35195 1569 13336 13698 55002;55003 55002 TPVTQVNEVTGTLR 14 0 1 Unmodified _TPVTQVNEVTGTLR_ 0 0 0 H0YDP7;Q59GE9;A0A024R578;Q13405 H0YDP7 H0YDP7 MRPL49 39S ribosomal protein L49, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.9174 2 757.912287 1513.81002 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.029 1 74.029 73.529 74.529 0 0 0 0 1.2792E-10 1 43423 110.98 91.734 1 35196 173 13337 13699 55004 55004 TPVTQVNEVTGTLR 14 0 1 Unmodified _TPVTQVNEVTGTLR_ 0 0 0 H0YDP7;Q59GE9;A0A024R578;Q13405 H0YDP7 H0YDP7 MRPL49 39S ribosomal protein L49, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.9173 2 757.912287 1513.81002 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.948 1 72.948 72.448 73.448 0 0 0 0 5.0941E-07 1 43785 105.25 77.923 1 35197 173 13337 13699 55005 55005 TPVVQNAASIVQPSPAHVGQQGLSK 25 1 0 Unmodified _TPVVQNAASIVQPSPAHVGQQGLSK_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.4602 3 838.453871 2512.33978 67503.27 0.53263 0.00044658 0.096441 8.0862E-05 0.62907 0.00052745 838.788092566119 841.459678170352 77.484 0.593 77.484 77.22 77.813 0 331 47 11 0 0 0 1.3679E-09 2 45705 56.468 56.468 1 0.75671 0.81986 0 43996000 26920000 17076000 35198 591 13338 13700 55006;55007 55007 TPVVQNAASIVQPSPAHVGQQGLSK 25 1 0 Unmodified _TPVVQNAASIVQPSPAHVGQQGLSK_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 838.7895 3 838.453871 2512.33978 65538.05 0.71123 0.00059633 -0.090409 -7.5804E-05 0.62082 0.00052053 838.788020650266 841.459562203811 89.025 0.62042 89.025 88.764 89.385 0 292 40 10 0 0 0 0.00027228 2 49173 33.835 33.835 1 1.9403 1.5181 0 16400000 5261100 11139000 35199 591 13338 13700 55008;55009 55009 TPVVQNAASIVQPSPAHVGQQGLSK 25 1 0 Unmodified _TPVVQNAASIVQPSPAHVGQQGLSK_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 841.4608 3 838.453871 2512.33978 66630.68 0.40558 0.00034006 0.18909 0.00015854 0.59467 0.0004986 838.788137417514 841.459785964143 88.857 0.60217 88.857 88.557 89.159 0 297 38 12 0 0 0 1.6105E-13 2 48168 81.315 81.315 1 1.9936 1.6007 0 14581000 5092500 9488200 35200 591 13338 13700 55010;55011 55011 TPVVTGTGPNFSLGELQGHLAYDLNPASTGLR 32 0 1 Unmodified _TPVVTGTGPNFSLGELQGHLAYDLNPASTGLR_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1098.5674 3 1094.89663 3281.66805 58559.41 0.26824 0.0002937 -0.02377 -2.6026E-05 0.24447 0.00026767 1095.56506283095 1098.5672529543 120.96 0.49875 120.96 120.74 121.24 0 280 34 11 0 0 0 3.3616E-19 2 78104 70.57 62.805 1 0.75638 0.77039 0 30141000 15674000 14468000 35201 1091 13339 13701 55012;55013 55013 TPVVTGTGPNFSLGELQGHLAYDLNPASTGLR 32 0 1 Unmodified _TPVVTGTGPNFSLGELQGHLAYDLNPASTGLR_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1095.5657 3 1094.89663 3281.66805 58402.67 0.41556 0.00045499 0.23916 0.00026185 0.65471 0.00071684 1095.23093078311 1098.56747274643 120.57 0.49434 120.57 120.29 120.79 0 285 35 11 0 0 0 3.1048E-08 2 79607 46.785 41.299 1 0.74419 0.82222 0 41818000 25329000 16490000 35202 1091 13339 13701 55014;55015 55015 TPVVTGTGPNFSLGELQGHLAYDLNPASTGLR 32 0 1 Unmodified _TPVVTGTGPNFSLGELQGHLAYDLNPASTGLR_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1098.9008 3 1094.89663 3281.66805 57700.27 0.23314 0.00025526 0.042075 4.6068E-05 0.27521 0.00030133 1095.23107721755 1098.5670681382 133.55 0.48288 133.55 133.35 133.84 0 169 19 14 0 0 0 1.2787E-36 2 81301 103.95 103.95 1 0.96632 0.82028 0 33258000 16412000 16846000 35203 1091 13339 13701 55016;55017 55017 TPVVTGTGPNFSLGELQGHLAYDLNPASTGLR 32 0 1 Unmodified _TPVVTGTGPNFSLGELQGHLAYDLNPASTGLR_ 0 0 0 Q6FI30;B7Z4T6;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1095.2312 3 1094.89663 3281.66805 58310.72 0.5605 0.00061368 -0.2458 -0.00026913 0.3147 0.00034456 1095.23047993891 1098.56693086432 133.23 0.5166 133.23 133.09 133.61 0 131 19 11 0 0 0 2.669E-44 2 80229 119.8 119.8 1 0.91857 0.80127 0 30675000 15572000 15103000 35204 1091 13339 13701 55018;55019 55019 TPYTDVNIVTIR 12 0 1 Unmodified _TPYTDVNIVTIR_ 0 0 0 H0YMU3;B4DJB4;H0YL72;B4DSY4;Q53GF8;P50213;H0YLI6;B7Z9J8;H0YKD0 H0YMU3 H0YMU3 IDH3A Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.3835 2 696.380091 1390.74563 NaN NaN NaN -0.58729 -0.00040898 NaN NaN NaN NaN 91.494 0.58952 91.494 91.154 91.744 0 0 0 0 5.0301E-05 1 55451 94.465 80.347 1 NaN NaN 0 19175000 0 19175000 35205 987 13340 13702 55020 55020 TPYTIMFGPDK 11 1 0 Oxidation (M) _TPYTIM(ox)FGPDK_ TPYTIM(1)FGPDK TPYTIM(74.84)FGPDK 0 1 0 P27824;H0Y9Q7;Q16094;D6RGY2;Q6ZP56;D6RFL1;H0Y9H1 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.3167 2 643.310289 1284.60602 71910.98 0.45803 0.00029466 -0.10801 -6.9484E-05 0.35002 0.00022517 643.310094274189 647.3174967885 77.822 0.68832 77.822 77.402 78.09 0 192 52 6 0 0 0 0.00023476 2 45978 74.841 67.648 1 1.2176 1.2594 0 14705000 6005400 8699300 35206 1526 13341 13703 55021;55022 55022 1292 TPYTIMFGPDK 11 1 0 Oxidation (M) _TPYTIM(ox)FGPDK_ TPYTIM(1)FGPDK TPYTIM(83.87)FGPDK 0 1 0 P27824;H0Y9Q7;Q16094;D6RGY2;Q6ZP56;D6RFL1;H0Y9H1 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.3086 2 643.310289 1284.60602 74207.68 0.48208 0.00031013 -0.61517 -0.00039574 -0.13309 -8.5617E-05 643.310120902224 647.316677776897 76.758 0.56274 76.758 76.471 77.034 0 176 40 6 0 0 0 0.00017901 2 46371 83.869 80.613 1 1.1269 1.1919 0 20181000 8978300 11203000 35207 1526 13341 13703 55023;55024 55024 1292 TQASSSFQDSSQPAGK 16 1 0 Unmodified _TQASSSFQDSSQPAGK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 817.3814 2 813.373723 1624.73289 67681.43 0.70143 0.00057053 0.017238 1.4021E-05 0.71867 0.00058455 813.373791408034 817.380838147505 21.485 0.56035 21.485 21.258 21.818 0 219 30 10 0 0 0 4.6661E-95 2 7714 222.73 220.11 1 1.0178 1.1459 0 121760000 56337000 65419000 35208 1570 13342 13704 55025;55026 55026 TQASSSFQDSSQPAGK 16 1 0 Unmodified _TQASSSFQDSSQPAGK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.3817 2 813.373723 1624.73289 67920.33 0.39666 0.00032263 0.16821 0.00013681 0.56487 0.00045945 813.373917835715 817.380852682796 21.44 0.62189 21.44 21.203 21.825 1.9073E-06 183 29 10 0 0 0 2.0368E-187 3 7477 283.21 279.91 1 1.0444 1.1941 0 158800000 81530000 77266000 35209 1570 13342 13704 55027;55028;55029 55027 TQASSSFQDSSQPAGK 16 1 0 Unmodified _TQASSSFQDSSQPAGK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 817.8812 2 813.373723 1624.73289 67705.82 0.53654 0.00043641 0.19471 0.00015837 0.73124 0.00059478 813.373972727334 817.380947135268 23.796 0.68033 23.796 23.541 24.221 0 257 37 11 0 0 0 0.0001086 1 8079 78.763 78.763 1 1.2102 1.0292 0 62441000 28772000 33669000 35210 1570 13342 13704 55030 55030 TQASSSFQDSSQPAGK 16 1 0 Unmodified _TQASSSFQDSSQPAGK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 817.3813 2 813.373723 1624.73289 67088.73 0.51658 0.00042017 -0.088081 -7.1643E-05 0.4285 0.00034853 813.373717899993 817.380733247554 23.825 0.81911 23.825 23.581 24.4 0 364 50 11 0 0 0 0.00011909 2 7624 77.894 75.669 1 1.3142 1.0926 0 38093000 16587000 21507000 35211 1570 13342 13704 55031;55032 55032 TQEDKEPISENIEVSK 16 2 0 Unmodified _TQEDKEPISENIEVSK_ 0 0 1 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.4737 2 923.457453 1844.90035 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.791 1 43.791 43.291 44.291 0 0 0 0 0.003402 1 23846 65.809 45.428 1 35212 1795 13343 13705 55033 55033 TQEPAGSLEENNSDK 15 1 0 Unmodified _TQEPAGSLEENNSDK_ 0 0 0 Q9NYV4;H0YLT2 Q9NYV4 Q9NYV4 CDK12 Cyclin-dependent kinase 12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.8725 2 809.863188 1617.71182 NaN NaN NaN 0.79664 0.00064517 NaN NaN NaN NaN 24.431 0.20023 24.431 24.279 24.479 0 0 0 0 0.00081201 1 10118 67.456 61.073 1 NaN NaN 0 1048600 0 1048600 35213 2085 13344 13706 55034 55034 TQGFILNTK 9 1 0 Unmodified _TQGFILNTK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.2873 2 511.287474 1020.5604 NaN NaN NaN -0.49457 -0.00025287 NaN NaN NaN NaN 59.725 0.70335 59.725 59.492 60.195 -3.8147E-06 0 0 0 0.00017706 1 34029 93.267 68.373 1 NaN NaN 0 33202000 33202000 0 35214 716 13345 13707 55035 55035 TQGFLALFSGDTGEIK 16 1 0 Unmodified _TQGFLALFSGDTGEIK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 842.4341 2 842.433052 1682.85155 66540.05 1.0907 0.00091883 -0.543 -0.00045744 0.5477 0.0004614 842.934277998592 846.439486736792 121.66 0.85524 121.66 121.27 122.13 7.6294E-06 365 56 10 0 0 0 1.7748E-12 2 78559 121.76 121.76 1 0.82149 0.92201 0 67347000 36787000 30559000 35215 2120 13346 13708 55036;55037 55036 TQGFLALFSGDTGEIK 16 1 0 Unmodified _TQGFLALFSGDTGEIK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.433 2 842.433052 1682.85155 66800.7 1.0198 0.0008591 -0.479 -0.00040352 0.54079 0.00045558 842.432710846705 846.439885179589 121.17 0.77832 121.17 120.82 121.6 -7.6294E-06 345 51 11 0 0 0 1.0308E-56 3 80113 180.61 180.61 1 0.82882 0.9321 0 72219000 36676000 35543000 35216 2120 13346 13708 55038;55039;55040 55040 TQGFLALFSGDTGEIK 16 1 0 Unmodified _TQGFLALFSGDTGEIK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 846.4413 2 842.433052 1682.85155 65408.19 1.0957 0.00092302 -0.52483 -0.00044214 0.57082 0.00048088 842.432641396732 846.439761285218 134.11 0.55873 134.11 133.79 134.35 0 122 24 7 0 0 0 5.8572E-05 1 81702 82.908 77.062 1 1.2414 1.0135 0 33167000 15345000 17822000 35217 2120 13346 13708 55041 55041 TQGFLALFSGDTGEIK 16 1 0 Unmodified _TQGFLALFSGDTGEIK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 842.9333 2 842.433052 1682.85155 66117.45 1.1697 0.00098538 -0.092124 -7.7608E-05 1.0776 0.00090778 842.433049369512 846.44019298774 133.87 0.61484 133.87 133.61 134.22 0 168 30 8 0 0 0 0.0001547 1 80592 70.889 64.917 1 1.2253 1.0113 0 30812000 14103000 16709000 35218 2120 13346 13708 55042 55042 TQGQDSLEAQLSSLESSR 18 0 1 Unmodified _TQGQDSLEAQLSSLESSR_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 973.4693 2 968.46634 1934.91813 63360.94 0.78791 0.00076306 -0.082355 -7.9758E-05 0.70555 0.0006833 968.466015026828 973.470007672641 95.753 0.32514 95.753 95.576 95.901 7.6294E-06 64 26 4 0 0 0 0.0010025 1 59562 38.189 34.966 1 1.1601 1.1616 0 6837800 2682300 4155500 35219 1680 13347 13709 55043 55043 TQGQDSLEAQLSSLESSR 18 0 1 Unmodified _TQGQDSLEAQLSSLESSR_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 968.9688 2 968.46634 1934.91813 61810.48 0.11178 0.00010826 0.12027 0.00011648 0.23205 0.00022473 968.968170892517 973.470935270184 110.09 0.49644 110.09 109.8 110.3 7.6294E-06 118 25 7 0 0 0 0.00059584 2 63461 43.184 37.905 1 1.8693 1.5323 0 12662000 3968700 8693700 35220 1680 13347 13709 55044;55045 55045 TQGQDSLEAQLSSLESSR 18 0 1 Unmodified _TQGQDSLEAQLSSLESSR_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 973.972 2 968.46634 1934.91813 61837.81 0.25594 0.00024786 -0.049959 -4.8384E-05 0.20598 0.00019948 968.463971844124 973.972454586849 110.02 0.4641 110.02 109.81 110.27 7.6294E-06 125 24 7 0 0 0 0.0006664 2 62487 42.317 41.127 1 2.0467 1.6613 0 10102000 3895900 6206400 35221 1680 13347 13709 55046;55047 55046 TQGVPAVLK 9 1 0 Unmodified _TQGVPAVLK_ 0 0 0 A6NEM2;P51610;Q05C05 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.7792 2 456.779285 911.544017 90569.65 0.045219 2.0655E-05 1.2354 0.00056432 1.2806 0.00058497 456.779317407617 460.78654709256 52.173 0.72282 52.173 51.806 52.529 0 183 54 6 0 0 0 0.030744 1 28911 45.738 30.963 1 0.68497 0.72054 0 30594000 18259000 12334000 35222 680 13348 13710 55048 55048 TQHLQELFSR 10 0 1 Unmodified _TQHLQELFSR_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.559 3 420.222805 1257.64658 96071.49 -0.031998 -1.3446E-05 -0.077382 -3.2518E-05 -0.10938 -4.5964E-05 420.222968360619 423.558754726137 53.896 0.37795 53.896 53.704 54.082 -3.8147E-06 73 30 4 0 0 0 0.003555 1 30205 51.841 22.5 1 2.2721 2.3332 0 10121000 3088800 7032000 35223 1901 13349 13711 55049 55049 TQIAPGSQTVLGIGPGPADLIDK 23 1 0 Unmodified _TQIAPGSQTVLGIGPGPADLIDK_ 0 0 0 Q96ME4;J3KQ48;Q9Y3E5 Q96ME4 Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1125.1129 2 1124.61281 2247.21106 57447.25 0.41073 0.00046191 -0.25984 -0.00029222 0.15089 0.00016969 1125.11434047671 1128.61920047226 128 0.52426 128 127.76 128.28 0 123 20 9 0 0 0 0.0015257 2 77148 32.926 32.926 1 1.0647 0.82768 0 12553000 6181400 6371300 35224 1329 13350 13712 55050;55051 55050 TQIAPGSQTVLGIGPGPADLIDK 23 1 0 Unmodified _TQIAPGSQTVLGIGPGPADLIDK_ 0 0 0 Q96ME4;J3KQ48;Q9Y3E5 Q96ME4 Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1128.6206 2 1124.61281 2247.21106 57632.35 0.28608 0.00032173 0.023525 2.6456E-05 0.3096 0.00034818 1125.11463422955 1128.61886608141 127.87 0.55616 127.87 127.58 128.13 0 135 22 9 0 0 0 0.0028242 1 76140 29.422 29.422 1 1.0051 0.81307 0 13414000 6265700 7148600 35225 1329 13350 13712 55052 55052 TQIVTEIISEIR 12 0 1 Unmodified _TQIVTEIISEIR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.4019 2 701.401024 1400.78749 71467.32 0.95034 0.00066657 -0.36091 -0.00025315 0.58943 0.00041343 701.40110959806 706.405183556808 118.69 1.2452 118.69 118.23 119.48 0 415 76 8 0 0 0 0.0001995 2 76078 78.653 78.653 1 0.77066 0.87004 0 100930000 54097000 46833000 35226 1995;1289 13351 13713 55053;55054 55054 TQIVTEIISEIR 12 0 1 Unmodified _TQIVTEIISEIR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.4015 2 701.401024 1400.78749 71437.27 0.8342 0.00058511 -0.22705 -0.00015925 0.60716 0.00042586 701.401040152857 706.405251928085 118.13 1.2418 118.13 117.7 118.94 0 532 80 11 0 0 0 1.1589E-17 3 77617 138.25 138.25 1 0.76824 0.88297 0 198700000 111640000 87051000 35227 1995;1289 13351 13713 55055;55056;55057 55056 TQIVTEIISEIR 12 0 1 Unmodified _TQIVTEIISEIR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 706.4061 2 701.401024 1400.78749 72522.75 0.73537 0.00051579 0.010315 7.2349E-06 0.74569 0.00052303 701.401138892012 706.405071591907 131.45 1.302 131.45 131.15 132.45 1.5259E-05 368 61 10 0 0 0 0.0007952 2 79681 65.695 56.225 1 1.4964 1.2899 0 68936000 26080000 42856000 35228 1995;1289 13351 13713 55058;55059 55058 TQIVTEIISEIR 12 0 1 Unmodified _TQIVTEIISEIR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 701.4014 2 701.401024 1400.78749 72309.88 0.88248 0.00061897 0.043225 3.0318E-05 0.92571 0.00064929 701.401095517622 706.405118581508 131.23 0.95189 131.23 130.92 131.87 0 262 39 10 0 0 0 0.00022889 2 78601 88.24 88.24 1 1.5437 1.3471 0 64345000 25595000 38750000 35229 1995;1289 13351 13713 55060;55061 55061 TQIVTEIISEIR 12 0 1 Unmodified _TQIVTEIISEIR_ 0 0 0 H0Y9Z8;Q9BPX3;Q6NUR1 H0Y9Z8;Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 706.8707 2 701.401024 1400.78749 72841.04 1.0432 0.00073167 0.35252 0.00024726 1.3957 0.00097893 701.401352348712 706.405513523044 131.87 0.51669 131.87 131.69 132.2 0 74 22 4 0 0 0 0.0083648 1 79083 68.355 64.017 1 1.5574 1.3547 0 4279800 1615800 2664000 35230 1995;1289 13351 13713 55062 55062 TQLEELEDELQATEDAK 17 1 0 Unmodified _TQLEELEDELQATEDAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;O14729;O14794;Q66K75;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;FLJ00279;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.9723 2 981.462932 1960.91131 60567.57 0.26487 0.00025996 -0.15529 -0.00015241 0.10958 0.00010755 981.964820634639 985.470317894409 108.11 0.81127 108.11 107.72 108.53 0 423 61 9 0 0 0 4.2296E-95 3 67382 216.15 216.15 1 1.8064 2.0786 0 207280000 74244000 133030000 35231 81;1544 13352 13714 55063;55064;55065 55064 TQLEELEDELQATEDAK 17 1 0 Unmodified _TQLEELEDELQATEDAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;O14729;O14794;Q66K75;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;FLJ00279;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 985.4701 2 981.462932 1960.91131 60540.17 0.36545 0.00035868 -0.35778 -0.00035115 0.0076728 7.5305E-06 981.46306619373 985.470184014437 107.58 0.81802 107.58 107.26 108.08 -7.6294E-06 386 58 9 0 0 0 8.827E-166 2 68683 267.93 267.93 1 1.8133 2.0877 0 177810000 61961000 115850000 35232 81;1544 13352 13714 55066;55067 55066 TQLEELEDELQATEDAK 17 1 0 Unmodified _TQLEELEDELQATEDAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;O14729;O14794;Q66K75;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;FLJ00279;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 985.974 2 981.462932 1960.91131 60801.11 0.36306 0.00035633 0.53919 0.00052919 0.90224 0.00088552 981.965008932912 985.470505156894 119.78 1.1842 119.78 119.44 120.62 0 311 53 10 0 0 0 8.812E-35 4 70893 161.04 161.04 1 2.739 2.2826 0 48208000 11843000 36365000 35233 81;1544 13352 13714 55068;55069;55070;55071 55069 TQLEELEDELQATEDAK 17 1 0 Unmodified _TQLEELEDELQATEDAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;O14729;O14794;Q66K75;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;FLJ00279;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 981.4635 2 981.462932 1960.91131 61282.78 0.33916 0.00033288 0.27358 0.00026851 0.61274 0.00060138 981.463230777412 985.971759456262 119.88 0.68405 119.88 119.43 120.12 0 192 29 9 0 0 0 5.1035E-18 2 70124 130.47 130.47 1 2.5562 2.1434 0 47472000 13450000 34022000 35234 81;1544 13352 13714 55072;55073 55073 TQLEELEDELQATEDAK 17 1 0 Unmodified _TQLEELEDELQATEDAK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;O14729;O14794;Q66K75;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;FLJ00279;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 985.4722 2 981.462932 1960.91131 61349.97 0.43342 0.00042538 0.80093 0.00078609 1.2344 0.0012115 981.965221300841 985.47057952594 120.14 0.40406 120.14 120.05 120.45 7.6294E-06 85 21 6 0 0 0 0.0044313 1 70553 35.35 35.35 1 2.5327 2.0337 0 17791000 5027700 12764000 35235 81;1544 13352 13714 55074 55074 TQLNLLLDK 9 1 0 Unmodified _TQLNLLLDK_ 0 0 0 A0A0A0MRM8;A0A0D9SGC1;E7EW20;Q9UM54 A0A0A0MRM8 A0A0A0MRM8 MYO6 Unconventional myosin-VI MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.3235 2 529.316232 1056.61791 83972.23 0.68283 0.00036143 0.07996 4.2324E-05 0.76278 0.00040375 529.316132499076 533.824852503934 86.951 0.22181 86.951 86.848 87.069 0 33 14 5 0 0 0 0.017039 1 52473 53.327 38.176 1 0.94508 1.006 0 15916000 8217700 7698100 35236 467 13353 13715 55075 55075 TQLQHSLPLLLICDNLR 17 0 1 Unmodified _TQLQHSLPLLLICDNLR_ 0 0 0 Q9HC36;I3L443 Q9HC36 Q9HC36 RNMTL1 rRNA methyltransferase 3, mitochondrial ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 679.0452 3 678.710336 2033.10918 NaN NaN NaN -0.27049 -0.00018359 NaN NaN NaN NaN 128.49 0.32336 128.49 128.35 128.67 0 0 0 0 0.016579 1 77604 30.489 19.288 1 NaN NaN 0 1658100 1658100 0 35237 2051 13354 13716 55076 55076 TQLQHSLPLLLICDNLR 17 0 1 Unmodified _TQLQHSLPLLLICDNLR_ 0 0 0 Q9HC36;I3L443 Q9HC36 Q9HC36 RNMTL1 rRNA methyltransferase 3, mitochondrial MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.0466 3 678.710336 2033.10918 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.27 1 128.27 127.77 128.77 0 0 0 0 0.047815 1 76557 43.454 29.2 1 35238 2051 13354 13716 55077 55077 TQLYEYLQNR 10 0 1 Unmodified _TQLYEYLQNR_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.3362 2 664.335684 1326.65681 73342.85 0.77442 0.00051448 -0.14633 -9.7212E-05 0.62809 0.00041727 664.335540653583 669.339667858224 75.384 1.2324 75.384 74.97 76.203 0 588 102 9 0 0 0 1.9346E-09 2 44143 129.72 117.44 1 0.75016 0.88714 0 279570000 156490000 123070000 35239 2129 13355 13717 55078;55079 55079 TQLYEYLQNR 10 0 1 Unmodified _TQLYEYLQNR_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.336 2 664.335684 1326.65681 74100.48 0.68694 0.00045636 -0.1039 -6.9024E-05 0.58304 0.00038733 664.335530977511 669.339701796242 74.345 1.1884 74.345 73.85 75.039 7.6294E-06 607 103 9 0 0 0 1.5398E-09 2 44490 131.41 120.58 1 0.76912 0.89086 0 285430000 160040000 125390000 35240 2129 13355 13717 55080;55081 55081 TQLYEYLQNR 10 0 1 Unmodified _TQLYEYLQNR_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.3399 2 664.335684 1326.65681 73956.95 0.51819 0.00034425 0.17586 0.00011683 0.69405 0.00046108 664.335897912454 669.339857619047 86.294 1.6181 86.294 85.78 87.398 0 673 101 11 0 0 0 0.001179 3 47078 74.92 41.695 1 0.96901 0.83536 0 70059000 36549000 33510000 35241 2129 13355 13717 55082;55083;55084 55083 TQLYEYLQNR 10 0 1 Unmodified _TQLYEYLQNR_ 0 0 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.3411 2 664.335684 1326.65681 74270.04 0.56684 0.00037657 0.037651 2.5013E-05 0.60449 0.00040159 664.335839229385 669.339704128112 86.523 2.1059 86.523 85.932 88.038 0 712 125 13 0 0 0 0.00013992 4 46422 96.034 65.465 1 0.95219 0.83087 0 62665000 31673000 30992000 35242 2129 13355 13717 55085;55086;55087;55088 55086 TQMAEVLPSPR 11 0 1 Oxidation (M) _TQM(ox)AEVLPSPR_ TQM(1)AEVLPSPR TQM(165.39)AEVLPSPR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.8188 2 622.818812 1243.62307 75762.24 0.36719 0.00022869 0.19035 0.00011855 0.55753 0.00034724 622.818867706421 627.823006994358 45.874 1.2599 45.874 45.291 46.551 0 616 110 8 0 0 0 4.203E-23 2 24557 165.39 138.44 1 1.0032 1.186 0 257380000 129790000 127590000 35243 1471 13356 13718 55089;55090 55090 1213 TQMAEVLPSPR 11 0 1 Oxidation (M) _TQM(ox)AEVLPSPR_ TQM(1)AEVLPSPR TQM(66.26)AEVLPSPR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.8231 2 622.818812 1243.62307 NaN NaN NaN -0.10256 -6.3874E-05 NaN NaN NaN NaN 44.9 1.0316 44.9 44.435 45.467 0 0 0 0 0.0013572 1 24363 66.262 46.122 1 NaN NaN 0 140730000 0 140730000 35244 1471 13356 13718 55091 55091 1213 TQMAEVLPSPR 11 0 1 Oxidation (M) _TQM(ox)AEVLPSPR_ TQM(1)AEVLPSPR TQM(112.83)AEVLPSPR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8189 2 622.818812 1243.62307 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.713 1 44.713 44.213 45.213 0 0 0 0 3.8255E-09 1 24458 112.83 89.762 1 35245 1471 13356 13718 55092 55092 1213 TQMAEVLPSPR 11 0 1 Oxidation (M) _TQM(ox)AEVLPSPR_ TQM(1)AEVLPSPR TQM(62.41)AEVLPSPR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.8226 2 622.818812 1243.62307 75707.91 0.36489 0.00022726 -0.11389 -7.0935E-05 0.25099 0.00015632 622.818755596805 627.822824424228 52.881 1.2192 52.881 52.392 53.612 0 536 92 9 0 0 0 0.0010192 2 25428 62.408 55.164 1 0.85046 0.72207 0 18956000 10025000 8930700 35246 1471 13356 13718 55093;55094 55093 1213 TQMAEVLPSPR 11 0 1 Unmodified _TQMAEVLPSPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.826 2 614.821355 1227.62816 76331.8 0.27409 0.00016851 0.16679 0.00010255 0.44088 0.00027106 614.821534906291 619.825581547773 77.229 1.1373 77.229 76.571 77.708 0 313 75 7 0 0 0 0.0087246 2 41212 50.284 39.912 1 1.3195 1.0779 0 14137000 6245700 7891500 35247 1471 13356 13719 55095;55096 55095 TQMAEVLPSPR 11 0 1 Unmodified _TQMAEVLPSPR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.8218 2 614.821355 1227.62816 76637.35 0.46429 0.00028545 0.13347 8.2062E-05 0.59776 0.00036752 614.821430458338 619.825553555119 77.405 1.22 77.405 76.862 78.082 7.6294E-06 355 74 8 0 0 0 0.0030982 2 40587 60.434 55.275 1 1.4661 1.1826 0 10992000 4836800 6154700 35248 1471 13356 13719 55097;55098 55097 TQMLDQEELLASTR 14 0 1 Oxidation (M) _TQM(ox)LDQEELLASTR_ TQM(1)LDQEELLASTR TQM(48.74)LDQEELLASTR 0 1 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;M1V490;M1VPF9;M1V481;M1VPF7;M1VRN0;M1VKI9;M1VE89 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020630)_K15;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-RET(NM_020975)_K16;R12 Kinesin-like protein;Kinesin-1 heavy chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.9079 2 825.903802 1649.79305 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.113 1 73.113 72.613 73.613 0 0 0 0 0.006171 1 43893 48.741 39.054 1 35249 1186 13357 13720 55099 55099 903 TQNVLGLQK 9 1 0 Unmodified _TQNVLGLQK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.8001 2 500.792924 999.571294 86109.79 0.45919 0.00022996 -0.033667 -1.686E-05 0.42552 0.0002131 500.792756098487 504.800026233161 44.196 0.66116 44.196 43.883 44.544 3.8147E-06 195 59 5 0 0 0 0.008633 1 24077 60.91 42.925 1 1.0687 1.145 0 21265000 10192000 11072000 35250 1795 13358 13721 55100 55100 TQPAVATAATAAEK 14 1 0 Unmodified _TQPAVATAATAAEK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E9LUH3;C6KG45;A0A0S2Z401;A0A075BRI2;A0A075BRJ5;C6FGV0;A0A0S2Z3Y9;A0A0S2Z400;Q59FJ6 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.3622 2 665.354074 1328.69359 75883.98 0.36623 0.00024367 0.24196 0.00016099 0.60819 0.00040466 665.354263682292 669.361015369897 40.042 0.54601 40.042 39.844 40.39 0 175 42 6 0 0 0 0.045665 1 18347 26.703 17.748 1 1.0003 0.78852 0 3085000 1544900 1540100 35251 623 13359 13722 55101 55101 TQPDGTSVPGEPASPISQR 19 0 1 Unmodified _TQPDGTSVPGEPASPISQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 962.4749 2 962.473968 1922.93338 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.951 1 59.951 59.451 60.451 0 0 0 0 0.054023 1 34202 40.941 32.542 1 35252 186;1747 13360 13723 55102 55102 TQPDGTSVPGEPASPISQR 19 0 1 Unmodified _TQPDGTSVPGEPASPISQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 967.4776 2 962.473968 1922.93338 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.979 1 59.979 59.479 60.479 0 0 0 0 0.0022768 1 34215 53.754 24.455 1 35253 186;1747 13360 13723 55103 55103 TQPDGTSVPGEPASPISQR 19 0 1 Unmodified _TQPDGTSVPGEPASPISQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 962.4739 2 962.473968 1922.93338 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.157 1 59.157 58.657 59.657 0 0 0 0 0.026887 1 34427 57.434 32.581 1 35254 186;1747 13360 13723 55104 55104 TQPDGTSVPGEPASPISQR 19 0 1 Unmodified _TQPDGTSVPGEPASPISQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 967.4792 2 962.473968 1922.93338 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.159 1 59.159 58.659 59.659 0 0 0 0 0.0033568 1 34428 51.771 36.895 1 35255 186;1747 13360 13723 55105 55105 TQPDGTSVPGEPASPISQR 19 0 1 Unmodified _TQPDGTSVPGEPASPISQR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 962.9761 2 962.473968 1922.93338 63844.77 -0.12443 -0.00011976 0.43744 0.00042102 0.31301 0.00030126 962.975471809149 967.979967668094 70.281 0.49747 70.281 70.092 70.589 0 190 45 6 0 0 0 0.011102 1 36072 24.964 24.964 1 2.0779 1.724 0 5747500 1787200 3960300 35256 186;1747 13360 13723 55106 55106 TQPFQAQPPQQK 12 1 0 Unmodified _TQPFQAQPPQQK_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3683 2 699.362233 1396.70991 73372.58 0.50646 0.0003542 -0.054478 -3.81E-05 0.45198 0.0003161 699.362338182537 703.870471199762 34.141 0.63249 34.141 33.755 34.388 0 195 59 4 0 0 0 0.00086156 3 16922 64.711 45.931 1 0.84612 0.87555 0 17148000 9918900 7229200 35257 1260 13361 13724 55107;55108;55109 55107 TQPFQAQPPQQK 12 1 0 Unmodified _TQPFQAQPPQQK_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.3628 2 699.362233 1396.70991 73401.92 0.43081 0.00030129 0.13138 9.1884E-05 0.56219 0.00039317 699.362306035989 703.369404226125 33.375 0.52208 33.375 33.094 33.617 3.8147E-06 197 44 6 0 0 0 0.00054926 2 16701 69.338 50.558 1 0.92953 0.94441 0 30055000 13578000 16477000 35258 1260 13361 13724 55110;55111 55111 TQPFQAQPPQQK 12 1 0 Unmodified _TQPFQAQPPQQK_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.3626 2 699.362233 1396.70991 74594.13 0.47137 0.00032965 0.86063 0.00060189 1.332 0.00093155 699.362578109653 703.37010582889 38.718 0.73512 38.718 38.324 39.059 3.8147E-06 228 56 5 0 0 0 0.018515 1 17600 40.724 35.94 1 2.1128 1.6699 0 5165800 1863700 3302100 35259 1260 13361 13724 55112 55112 TQPMTAQAASYR 12 0 1 Oxidation (M) _TQPM(ox)TAQAASYR_ TQPM(1)TAQAASYR TQPM(76.14)TAQAASYR 0 1 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.8228 2 670.816801 1339.61905 NaN NaN NaN 0.43541 0.00029208 NaN NaN NaN NaN 21.445 0.55108 21.445 21.166 21.717 0 0 0 0 0.00050021 2 7650 76.143 57.363 1 NaN NaN 0 6445400 0 6445400 35260 571 13362 13725 55113;55114 55113 424 TQPMTAQAASYR 12 0 1 Oxidation (M) _TQPM(ox)TAQAASYR_ TQPM(1)TAQAASYR TQPM(65.5)TAQAASYR 0 1 0 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.8214 2 670.816801 1339.61905 76434.12 0.45541 0.0003055 0.38017 0.00025502 0.83558 0.00056052 670.817196014491 675.821248557788 21.346 0.43942 21.346 21.127 21.567 -1.9073E-06 80 19 6 0 0 0 0.00039161 2 7480 65.5 59.943 1 1.715 1.6897 0 14621000 6148600 8472200 35261 571 13362 13725 55115;55116 55115 424 TQPTVINNLK 10 1 0 Unmodified _TQPTVINNLK_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.3338 2 564.324588 1126.63462 80961.16 0.61003 0.00034425 0.1635 9.2267E-05 0.77353 0.00043652 564.324481571877 568.331772730871 50.053 0.4702 50.053 49.809 50.279 3.8147E-06 135 43 5 0 0 0 0.0023645 2 27549 69.423 55.217 1 0.87219 0.9431 0 42865000 22254000 20611000 35262 655 13363 13726 55117;55118 55117 TQPTVINNLK 10 1 0 Unmodified _TQPTVINNLK_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.3246 2 564.324588 1126.63462 80537.21 0.6502 0.00036693 -0.30899 -0.00017437 0.34121 0.00019255 564.324426353111 568.331391709573 48.814 0.48839 48.814 48.529 49.017 -3.8147E-06 142 38 5 0 0 0 0.0017496 3 27300 72.23 58.023 1 0.74605 0.80283 0 37718000 23196000 14522000 35263 655 13363 13726 55119;55120;55121 55121 TQQAAQANITLQEQIEAIHK 20 1 0 Unmodified _TQQAAQANITLQEQIEAIHK_ 0 0 0 A0A024R1K8;Q15459;B4E091;H7C1L2 A0A024R1K8 A0A024R1K8 SF3A1 Splicing factor 3A subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.3997 3 745.729113 2234.16551 76206.25 1.0521 0.00078455 -0.99932 -0.00074522 0.052743 3.9332E-05 745.728427468428 748.40004757789 80.294 0.12833 80.294 80.233 80.361 0 21 10 4 0 0 0 0.010408 1 47726 22.01 22.01 1 0.59369 0.60077 0 4736600 2999700 1736900 35264 79 13364 13727 55122 55122 TQQAAQANITLQEQIEAIHK 20 1 0 Unmodified _TQQAAQANITLQEQIEAIHK_ 0 0 0 A0A024R1K8;Q15459;B4E091;H7C1L2 A0A024R1K8 A0A024R1K8 SF3A1 Splicing factor 3A subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.7374 3 745.729113 2234.16551 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.135 1 79.135 78.635 79.635 -7.6294E-06 0 0 0 0.033131 1 48052 43.12 34.188 1 35265 79 13364 13727 55123 55123 TQRPADVIFATVR 13 0 2 Unmodified _TQRPADVIFATVR_ 0 0 1 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.6163 3 491.94393 1472.80996 83669.57 0.19896 9.7875E-05 0.81809 0.00040245 1.017 0.00050033 492.279593264862 498.616185721109 78.607 1.2425 78.607 77.947 79.189 0 310 109 5 0 0 0 0.001043 1 46254 61.212 56.117 1 1.0234 1.1122 0 41219000 23102000 18117000 35266 560 13365 13728 55124 55124 TQRPADVIFATVR 13 0 2 Unmodified _TQRPADVIFATVR_ 0 0 1 B3KUD7;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;Q9H4N9 B3KUD7 B3KUD7 MCM7 DNA helicase;DNA replication licensing factor MCM7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.944 3 491.94393 1472.80996 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.608 1 76.608 76.108 77.108 0 0 0 0 0.032615 1 46260 39.629 25.723 1 35267 560 13365 13728 55125 55125 TQSRPGGPPNPPGPSPK 17 1 1 Unmodified _TQSRPGGPPNPPGPSPK_ 0 0 1 B3KR89;B9EGQ5;M0QXA7;O95785 B3KR89 B3KR89 WIZ Protein Wiz MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.6253 3 557.625149 1669.85362 81350.25 0.34325 0.00019141 -0.015821 -8.8222E-06 0.32743 0.00018258 557.625250500284 563.632685154117 25.61 0.34137 25.61 25.396 25.737 0 47 13 5 0 0 0 0.037439 1 9388 15.422 15.422 1 0.79453 0.72855 0 1029800 540770 489020 35268 932 13366 13729 55126 55126 TQSSASLAASYAAQQHPQAAASYR 24 0 1 Unmodified _TQSSASLAASYAAQQHPQAAASYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.0661 3 822.398314 2464.17311 66141.44 0.81293 0.00066855 0.21377 0.0001758 1.0267 0.00084435 822.732767175526 826.069292365552 55.41 0.51223 55.41 55.212 55.724 0 186 43 6 0 0 0 1.8262E-09 2 31052 57.147 57.147 1 1.6904 1.7357 0 25647000 10829000 14818000 35269 571 13367 13730 55127;55128 55127 TQSSASLAASYAAQQHPQAAASYR 24 0 1 Unmodified _TQSSASLAASYAAQQHPQAAASYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 825.7358 3 822.398314 2464.17311 67170.16 0.77501 0.00063736 0.098662 8.114E-05 0.87367 0.0007185 822.732380687551 826.069049556071 54.376 0.48436 54.376 54.106 54.59 0 215 40 8 0 0 0 1.4178E-12 2 30952 73.036 73.036 1 1.4338 1.5536 0 27567000 12444000 15123000 35270 571 13367 13730 55129;55130 55129 TQSSASLAASYAAQQHPQAAASYR 24 0 1 Unmodified _TQSSASLAASYAAQQHPQAAASYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 826.0704 3 822.398314 2464.17311 66839.57 0.92246 0.00075863 -0.26049 -0.00021423 0.66197 0.0005444 822.732357919003 825.734158551954 65.736 0.68153 65.736 65.459 66.141 0 380 49 10 0 0 0 1.8985E-09 3 33938 56.947 56.947 1 1.0018 0.83781 0 10312000 5573800 4738600 35271 571 13367 13730 55131;55132;55133 55133 TQSSASLAASYAAQQHPQAAASYR 24 0 1 Unmodified _TQSSASLAASYAAQQHPQAAASYR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;Q59GV2;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 826.0694 3 822.398314 2464.17311 67316.48 0.62831 0.00051672 -0.17921 -0.00014738 0.4491 0.00036934 822.732319345524 826.068761877251 66.477 0.71774 66.477 66.166 66.883 0 356 47 10 0 0 0 3.396E-06 3 33605 45.126 45.126 1 1.0946 0.90456 0 8115000 4035700 4079300 35272 571 13367 13730 55134;55135;55136 55136 TQSSLVEAFNK 11 1 0 Unmodified _TQSSLVEAFNK_ 0 0 0 Q8N1G0;H0Y5I5;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.3232 2 612.31696 1222.61937 77346.94 0.23338 0.0001429 1.0324 0.00063214 1.2658 0.00077504 612.316870248697 616.324383409171 62.896 0.74312 62.896 62.622 63.365 0 254 64 7 0 0 0 0.015285 1 36877 46.406 46.406 1 0.88229 0.90758 0 17986000 9198500 8787700 35273 1905 13368 13731 55137 55137 TQTAIASEDMPNTLTEAEK 19 1 0 Oxidation (M) _TQTAIASEDM(ox)PNTLTEAEK_ TQTAIASEDM(1)PNTLTEAEK TQTAIASEDM(51.87)PNTLTEAEK 0 1 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1037.488 2 1033.48334 2064.95213 61568.5 0.50379 0.00052066 -0.18201 -0.00018811 0.32178 0.00033255 1033.98439570548 1037.99228711427 57.842 0.57205 57.842 57.623 58.195 -3.8147E-06 139 45 5 0 0 0 1.8347E-05 2 32623 51.875 47.525 1 2.0749 2.0438 0 8579500 2994000 5585500 35274 415 13369 13732 55138;55139 55138 305 TQTAIASEDMPNTLTEAEK 19 1 0 Oxidation (M) _TQTAIASEDM(ox)PNTLTEAEK_ TQTAIASEDM(1)PNTLTEAEK TQTAIASEDM(92.46)PNTLTEAEK 0 1 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1037.9935 2 1033.48334 2064.95213 61294.62 0.34531 0.00035687 -0.067267 -6.9519E-05 0.27804 0.00028735 1033.48361751823 1037.49064705491 56.977 0.53826 56.977 56.75 57.289 -3.8147E-06 157 39 6 0 0 0 1.8743E-08 3 32810 92.457 87.073 1 1.7803 1.865 0 10689000 3621500 7067100 35275 415 13369 13732 55140;55141;55142 55141 305 TQTLDQENQQLQDQLR 16 0 1 Unmodified _TQTLDQENQQLQDQLR_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 984.4858 2 979.482325 1956.9501 62040.5 0.50975 0.00049929 0.08239 8.0699E-05 0.59214 0.00057999 979.983524955416 984.987896641885 65.63 0.55211 65.63 65.351 65.903 -7.6294E-06 252 49 7 0 0 0 2.6367E-17 2 37695 125.53 125.53 1 0.68163 0.70604 0 20463000 12826000 7637200 35276 371 13370 13733 55143;55144 55144 TQTLDQENQQLQDQLR 16 0 1 Unmodified _TQTLDQENQQLQDQLR_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 984.4867 2 979.482325 1956.9501 NaN NaN NaN -0.071241 -6.9779E-05 NaN NaN NaN NaN 64.601 0.56358 64.601 64.276 64.839 0 0 0 0 1.6238E-18 2 38101 125.61 112.21 1 NaN NaN 0 10026000 0 10026000 35277 371 13370 13733 55145;55146 55146 TQTPAAQPVPR 11 0 1 Unmodified _TQTPAAQPVPR_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.3199 2 583.319837 1164.62512 79177.99 0.70525 0.00041138 0.31076 0.00018127 1.016 0.00059265 583.320046952759 588.324317771603 26.186 0.43049 26.186 26.02 26.451 0 82 22 6 0 0 0 0.00047771 2 11633 75.378 60.705 1 1.3569 1.5578 0 52288000 20530000 31758000 35278 1851 13371 13734 55147;55148 55148 TQTPAAQPVPR 11 0 1 Unmodified _TQTPAAQPVPR_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.3196 2 583.319837 1164.62512 78616.61 0.36456 0.00021265 -1.2245 -0.00071429 -0.85996 -0.00050163 583.319832876907 588.324109338325 29.883 0.58917 29.883 29.521 30.11 0 133 43 5 0 0 0 0.044099 1 12218 35.511 26.297 1 1.7252 1.4543 0 3039100 1131300 1907800 35279 1851 13371 13734 55149 55149 TQTPAAQPVPR 11 0 1 Unmodified _TQTPAAQPVPR_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.3202 2 583.319837 1164.62512 NaN NaN NaN 0.37923 0.00022121 NaN NaN NaN NaN 30.022 0.43486 30.022 29.769 30.203 -1.9073E-06 0 0 0 0.015675 1 11846 54.416 39.266 1 NaN NaN 0 1034300 1034300 0 35280 1851 13371 13734 55150 55150 TQTPPLGQTPQLGLK 15 1 0 Unmodified _TQTPPLGQTPQLGLK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.9539 2 789.94613 1577.87771 69298.72 0.89777 0.00070919 0.41016 0.000324 1.3079 0.0010332 789.946618168998 793.953351710287 85.504 0.56319 85.504 85.296 85.859 0 195 45 6 0 0 0 0.00022565 2 51321 72.496 72.496 1 2.4005 2.5502 0 31608000 9005400 22603000 35281 1054 13372 13735 55151;55152 55151 TQTPPLGQTPQLGLK 15 1 0 Unmodified _TQTPPLGQTPQLGLK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.9534 2 789.94613 1577.87771 69135.86 0.6908 0.00054569 0.37438 0.00029574 1.0652 0.00084143 789.947326228944 793.953154213261 84.676 0.63229 84.676 84.374 85.006 0 221 52 7 0 0 0 0.0002191 3 51893 62.338 62.338 1 4.0037 4.1766 0 34141000 8751700 25389000 35282 1054 13372 13735 55153;55154;55155 55154 TQTPPLGQTPQLGLK 15 1 0 Unmodified _TQTPPLGQTPQLGLK_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.9536 2 789.94613 1577.87771 69771.49 0.64014 0.00050567 0.21353 0.00016868 0.85367 0.00067435 789.946232848218 793.953413016285 98.14 0.54387 98.14 97.928 98.472 7.6294E-06 124 33 6 0 0 0 0.011823 1 55273 34.386 34.386 1 2.3827 1.8539 0 3373600 961340 2412200 35283 1054 13372 13735 55156 55156 TQTSDPAMLPTMIGLLAEAGVR 22 0 1 2 Oxidation (M) _TQTSDPAM(ox)LPTM(ox)IGLLAEAGVR_ TQTSDPAM(1)LPTM(1)IGLLAEAGVR TQTSDPAM(54.6)LPTM(54.6)IGLLAEAGVR 0 2 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1158.0876 2 1152.58234 2303.15012 NaN NaN NaN 0.16417 0.00018922 NaN NaN NaN NaN 119.93 0.58089 119.93 119.58 120.16 0 0 0 0 4.4578E-06 1 77059 54.598 47.054 1 NaN NaN 0 8413900 0 8413900 35284 1382 13373 13736 55157 55157 1053;1054 TQTSDPAMLPTMIGLLAEAGVR 22 0 1 2 Oxidation (M) _TQTSDPAM(ox)LPTM(ox)IGLLAEAGVR_ TQTSDPAM(1)LPTM(1)IGLLAEAGVR TQTSDPAM(95.43)LPTM(95.43)IGLLAEAGVR 0 2 0 O43175;V9HW79;Q5SZU1;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 O43175 O43175 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1158.0901 2 1152.58234 2303.15012 NaN NaN NaN 0.032323 3.7255E-05 NaN NaN NaN NaN 119.35 0.50221 119.35 119.15 119.65 0 0 0 0 6.7829E-19 2 78599 95.428 90.251 1 NaN NaN 0 11372000 0 11372000 35285 1382 13373 13736 55158;55159 55159 1053;1054 TQVEASEESALNHLQNPGDAAEGR 24 0 1 Unmodified _TQVEASEESALNHLQNPGDAAEGR_ 0 0 0 A0A087WTY9;B3KQA0;Q9Y605 A0A087WTY9 A0A087WTY9 MRFAP1 MORF4 family-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.4021 3 841.728389 2522.16334 67399.18 0.59844 0.00050373 0.43208 0.00036369 1.0305 0.00086742 842.062772874252 845.399846755876 68.937 0.47617 68.937 68.657 69.133 0 148 41 6 0 0 0 5.2406E-07 1 39926 48.867 48.867 1 1.5378 1.5373 0 16816000 9305400 7510300 35286 407 13374 13737 55160 55160 TQVEASEESALNHLQNPGDAAEGR 24 0 1 Unmodified _TQVEASEESALNHLQNPGDAAEGR_ 0 0 0 A0A087WTY9;B3KQA0;Q9Y605 A0A087WTY9 A0A087WTY9 MRFAP1 MORF4 family-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.3973 3 841.728389 2522.16334 67080.83 0.59092 0.0004974 -0.18411 -0.00015497 0.40682 0.00034243 842.061809402149 845.399065285299 67.771 0.41262 67.771 67.555 67.968 0 149 35 6 0 0 0 5.7608E-12 1 40104 64.488 64.488 1 1.8575 1.8584 0 17028000 6045700 10982000 35287 407 13374 13737 55161 55161 TQVEASEESALNHLQNPGDAAEGR 24 0 1 Unmodified _TQVEASEESALNHLQNPGDAAEGR_ 0 0 0 A0A087WTY9;B3KQA0;Q9Y605 A0A087WTY9 A0A087WTY9 MRFAP1 MORF4 family-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 841.7303 3 841.728389 2522.16334 66711.16 0.46668 0.00039282 0.65533 0.00055161 1.122 0.00094443 842.063460250433 845.399898575307 79.689 0.47023 79.689 79.507 79.978 0 131 29 7 0 0 0 0.0060251 1 42959 22.762 22.762 1 0.81852 0.69159 0 2991500 1490700 1500800 35288 407 13374 13737 55162 55162 TQVEASEESALNHLQNPGDAAEGR 24 0 1 Unmodified _TQVEASEESALNHLQNPGDAAEGR_ 0 0 0 A0A087WTY9;B3KQA0;Q9Y605 A0A087WTY9 A0A087WTY9 MRFAP1 MORF4 family-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 842.067 3 841.728389 2522.16334 66542.83 0.4367 0.00036758 0.55584 0.00046786 0.99254 0.00083545 842.063338129134 845.399793506803 79.958 0.41262 79.958 79.805 80.218 0 131 23 9 0 0 0 0.0024207 1 42284 23.917 21.268 1 0.81398 0.71223 0 2552400 1430500 1122000 35289 407 13374 13737 55163 55163 TQVELLEAPTPALK 14 1 0 Unmodified _TQVELLEAPTPALK_ 0 0 0 P13807;Q53ER0;A8K6K7 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 755.4307 2 755.429781 1508.84501 70609.44 0.96673 0.0007303 -0.04401 -3.3247E-05 0.92272 0.00069705 755.429789777445 759.436834465831 112.18 0.67099 112.18 111.95 112.63 -7.6294E-06 211 38 9 0 0 0 5.0492E-05 2 65036 93.011 93.011 1 0.41088 0.34157 0 46695000 33392000 13304000 35290 1479 13375 13738 55164;55165 55164 TQVELLEAPTPALK 14 1 0 Unmodified _TQVELLEAPTPALK_ 0 0 0 P13807;Q53ER0;A8K6K7 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.4371 2 755.429781 1508.84501 70321.27 0.6148 0.00046444 0.20056 0.00015151 0.81536 0.00061595 755.429987992779 759.4369385701 111.98 0.71512 111.98 111.77 112.48 7.6294E-06 218 38 9 0 0 0 7.267E-05 2 64012 89.629 81.968 1 0.44557 0.37064 0 38674000 26845000 11829000 35291 1479 13375 13738 55166;55167 55167 TQVTVQYMQDR 11 0 1 Oxidation (M) _TQVTVQYM(ox)QDR_ TQVTVQYM(1)QDR TQVTVQYM(78.66)QDR 0 1 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.3358 2 692.829908 1383.64526 NaN NaN NaN -0.023735 -1.6444E-05 NaN NaN NaN NaN 33.53 0.73328 33.53 33.142 33.875 0 0 0 0 0.00062809 2 16711 78.655 39.033 1 NaN NaN 0 7308800 0 7308800 35292 606 13376 13739 55168;55169 55169 460 TQVTVQYMQDR 11 0 1 Oxidation (M) _TQVTVQYM(ox)QDR_ TQVTVQYM(1)QDR TQVTVQYM(40.59)QDR 0 1 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.8304 2 692.829908 1383.64526 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.366 1 33.366 32.866 33.866 -3.8147E-06 0 0 0 0.034298 1 16614 40.589 28.013 1 35293 606 13376 13739 55170 55170 460 TQVTVQYMQDR 11 0 1 Oxidation (M) _TQVTVQYM(ox)QDR_ TQVTVQYM(1)QDR TQVTVQYM(55.05)QDR 0 1 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.8304 2 692.829908 1383.64526 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.452 1 33.452 32.952 33.952 0 0 0 0 0.0076234 1 16664 55.046 29.792 1 35294 606 13376 13739 55171 55171 460 TQVTVQYMQDR 11 0 1 Oxidation (M) _TQVTVQYM(ox)QDR_ TQVTVQYM(1)QDR TQVTVQYM(82.26)QDR 0 1 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.8335 2 692.829908 1383.64526 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.776 1 32.776 32.276 33.276 -3.8147E-06 0 0 0 3.2999E-05 1 16330 82.261 33.837 1 35295 606 13376 13739 55172 55172 460 TQVVAGTNYYIK 12 1 0 Unmodified _TQVVAGTNYYIK_ 0 0 0 P01040;C9J0E4 P01040 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.8612 2 678.861534 1355.70852 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.441 1 62.441 61.941 62.941 0 0 0 0 0.028376 1 36620 46.706 21.851 1 35296 1438 13377 13740 55173 55173 TQVVAGTNYYIK 12 1 0 Unmodified _TQVVAGTNYYIK_ 0 0 0 P01040;C9J0E4 P01040 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.8603 2 678.861534 1355.70852 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.46 1 62.46 61.96 62.96 0 0 0 0 0.0080485 1 36631 59.542 33.603 1 35297 1438 13377 13740 55174 55174 TRDELDQFLDK 11 1 1 Unmodified _TRDELDQFLDK_ 0 0 1 Q14137;B2RDN4;A8K3R2;B4DEN9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.3558 2 690.343706 1378.67286 72391.95 0.51313 0.00035423 0.5422 0.0003743 1.0553 0.00072854 690.343665113376 699.35521728364 73.105 1.0325 73.105 72.707 73.739 0 394 90 6 0 0 0 0.0004588 2 42858 97.779 70.664 1 0.80426 0.96517 0 60849000 28875000 31973000 35298 1726 13378 13741 55175;55176 55176 TRDELDQFLDK 11 1 1 Unmodified _TRDELDQFLDK_ 0 0 1 Q14137;B2RDN4;A8K3R2;B4DEN9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.3561 2 690.343706 1378.67286 73825.66 0.43614 0.00030108 0.67446 0.00046561 1.1106 0.0007667 690.343951794482 699.355045033447 71.283 1.0187 71.283 70.624 71.643 0 395 77 8 0 0 0 0.0014517 2 42473 89.805 87.667 1 0.92669 1.0916 0 93101000 50114000 42986000 35299 1726 13378 13741 55177;55178 55177 TRDELDQFLDK 11 1 1 Unmodified _TRDELDQFLDK_ 0 0 1 Q14137;B2RDN4;A8K3R2;B4DEN9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.3553 2 690.343706 1378.67286 73621.36 0.47517 0.00032803 0.42228 0.00029152 0.89746 0.00061955 690.344008049548 699.355088137462 82.278 1.2768 82.278 82.016 83.293 0 467 76 11 0 0 0 0.0021881 3 44741 81.017 62.237 1 1.3527 1.1859 0 28797000 11373000 17424000 35300 1726 13378 13741 55179;55180;55181 55180 TRDELDQFLDK 11 1 1 Unmodified _TRDELDQFLDK_ 0 0 1 Q14137;B2RDN4;A8K3R2;B4DEN9;A0A075B729 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 699.3558 2 690.343706 1378.67286 72792.61 0.41444 0.00028611 0.39787 0.00027467 0.81232 0.00056078 690.343967868209 699.35505588099 82.411 1.411 82.411 82.127 83.538 7.6294E-06 419 81 8 0 0 0 0.0022412 1 43849 80.245 53.13 1 1.3643 1.1584 0 23639000 9953100 13686000 35301 1726 13378 13741 55182 55182 TREPLILEEER 11 0 2 Unmodified _TREPLILEEER_ 0 0 1 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.9247 3 462.252541 1383.73579 89106.5 0.37926 0.00017531 -0.64516 -0.00029823 -0.2659 -0.00012291 462.251961245232 468.924731754735 50.52 0.32078 50.52 50.345 50.666 0 119 28 5 0 0 0 0.0011896 2 28517 61.375 61.375 1 0.75286 0.8361 0 23969000 13029000 10939000 35302 1827 13379 13742 55183;55184 55184 TREPVTDNVEK 11 1 1 Unmodified _TREPVTDNVEK_ 0 0 1 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.342 2 644.330598 1286.64664 76999.64 0.72337 0.00046609 -0.25738 -0.00016584 0.466 0.00030026 644.330335175603 653.341583619744 19.195 0.20818 19.195 19.073 19.282 1.9073E-06 49 13 6 0 0 0 0.0025231 1 5872 76.143 27.346 1 0.91911 1.0003 0 9705000 4963200 4741800 35303 2154 13380 13743 55185 55185 TRLEQEIATYR 11 0 2 Unmodified _TRLEQEIATYR_ 0 0 1 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__A2A4G1;Q13092;CON__Q9Z2K1;CON__Q3ZAW8;A8MT21;CON__P35900;CON__Q9D312;P35900;CON__Q04695;Q04695;F5GWP8;Q14666;CON__P08779;P08779;CON__Q61782 CON__P02533;CON__Q04695;CON__P08779;CON__Q61782 CON__P02533 KRT14;K14;KRT15;KRT20;KRT17;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 690.3677 2 690.367515 1378.72048 73628.77 0.48997 0.00033826 0.51112 0.00035286 1.0011 0.00069112 690.367648354601 700.377051390933 48.84 0.78188 48.84 48.568 49.35 0 204 65 7 0 0 0 1.8597E-16 1 27343 179.19 136.33 1 0.009854 0.011712 0 207980000 205710000 2274100 + 35304 1150;1159;1168;1176 13381 13744 55186 55186 TRLEQEIATYR 11 0 2 Unmodified _TRLEQEIATYR_ 0 0 1 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__A2A4G1;Q13092;CON__Q9Z2K1;CON__Q3ZAW8;A8MT21;CON__P35900;CON__Q9D312;P35900;CON__Q04695;Q04695;F5GWP8;Q14666;CON__P08779;P08779;CON__Q61782 CON__P02533;CON__Q04695;CON__P08779;CON__Q61782 CON__P02533 KRT14;K14;KRT15;KRT20;KRT17;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.5807 3 460.580769 1378.72048 NaN NaN NaN 0.36723 0.00016914 NaN NaN NaN NaN 48.839 0.49926 48.839 48.656 49.155 3.8147E-06 0 0 0 0.0011452 1 27350 72.29 54.482 1 NaN NaN 0 79750000 79750000 0 + 35305 1150;1159;1168;1176 13381 13744 55187 55187 TRLEQEIATYR 11 0 2 Unmodified _TRLEQEIATYR_ 0 0 1 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__A2A4G1;Q13092;CON__Q9Z2K1;CON__Q3ZAW8;A8MT21;CON__P35900;CON__Q9D312;P35900;CON__Q04695;Q04695;F5GWP8;Q14666;CON__P08779;P08779;CON__Q61782 CON__P02533;CON__Q04695;CON__P08779;CON__Q61782 CON__P02533 KRT14;K14;KRT15;KRT20;KRT17;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.5807 3 460.580769 1378.72048 88721.27 0.19271 8.8757E-05 -0.3174 -0.00014619 -0.12469 -5.7431E-05 460.580577859433 467.252755323821 58.819 0.61828 58.819 58.564 59.182 -3.8147E-06 195 47 6 0 0 0 0.0094189 1 29923 43.798 29.54 1 0.10485 0.089567 0 6484400 5747600 736710 + 35306 1150;1159;1168;1176 13381 13744 55188 55188 TRLEQEIATYR 11 0 2 Unmodified _TRLEQEIATYR_ 0 0 1 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__A2A4G1;Q13092;CON__Q9Z2K1;CON__Q3ZAW8;A8MT21;CON__P35900;CON__Q9D312;P35900;CON__Q04695;Q04695;F5GWP8;Q14666;CON__P08779;P08779;CON__Q61782 CON__P02533;CON__Q04695;CON__P08779;CON__Q61782 CON__P02533 KRT14;K14;KRT15;KRT20;KRT17;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 460.5804 3 460.580769 1378.72048 90033.88 -0.0023874 -1.0996E-06 -0.085788 -3.9512E-05 -0.088176 -4.0612E-05 460.580660820276 467.252603833058 59.128 0.72942 59.128 58.83 59.559 -3.8147E-06 218 59 6 0 0 0 0.016514 1 29453 36.658 22.4 1 0.092097 0.083397 0 5002800 4452200 550660 + 35307 1150;1159;1168;1176 13381 13744 55189 55189 TRPSSTVIK 9 1 1 Unmodified _TRPSSTVIK_ 0 0 1 Q5SSJ5;B4E0N8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.7928 2 494.792924 987.571294 85556.96 0.29877 0.00014783 -0.26245 -0.00012986 0.036327 1.7974E-05 494.792816003674 503.803983782591 18.429 0.3683 18.429 18.296 18.664 0 66 14 8 0 0 0 0.0056942 1 5337 90.601 27.036 1 0.74872 0.90871 0 348560000 197510000 151040000 35308 1817 13382 13745 55190 55190 TRPSSTVIK 9 1 1 Unmodified _TRPSSTVIK_ 0 0 1 Q5SSJ5;B4E0N8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.7928 2 494.792924 987.571294 83194.16 0.06747 3.3383E-05 -0.15952 -7.8927E-05 -0.092046 -4.5544E-05 494.792860584318 503.804046744738 18.368 0.46003 18.368 18.222 18.682 0 55 15 8 0 0 0 0.00013124 1 5065 114.5 48.067 1 0.70071 0.83132 0 290040000 169650000 120380000 35309 1817 13382 13745 55191 55191 TRPSSTVIK 9 1 1 Unmodified _TRPSSTVIK_ 0 0 1 Q5SSJ5;B4E0N8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.7929 2 494.792924 987.571294 84698.15 -0.19307 -9.5529E-05 0.44129 0.00021835 0.24822 0.00012282 494.793403056936 503.804091471126 19.274 0.95723 19.274 18.592 19.549 0 207 44 8 0 0 0 0.022728 1 4852 69.825 15.667 1 0.91175 0.79028 0 16308000 8615400 7692900 35310 1817 13382 13745 55192 55192 TRPSSTVIK 9 1 1 Unmodified _TRPSSTVIK_ 0 0 1 Q5SSJ5;B4E0N8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.7929 2 494.792924 987.571294 85978.85 -0.25294 -0.00012515 0.31616 0.00015643 0.063223 3.1282E-05 494.793002917383 503.804252213757 18.876 0.81746 18.876 18.532 19.349 0 187 45 7 0 0 0 0.011758 1 4294 75.738 16.821 1 0.85211 0.72287 0 19594000 9912200 9682100 35311 1817 13382 13745 55193 55193 TRPVVAAGAVGLAQR 15 0 2 Unmodified _TRPVVAAGAVGLAQR_ 0 0 1 B7Z9I1;B4DWX6;A0A0S2Z366;Q5T4U5;Q5HYG7;P11310;B4DVB1;A0A0S2Z3A5;B4DJE7;B4DVE0;H0YDT5 B7Z9I1 B7Z9I1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.965 3 489.291441 1464.85249 84969.52 0.1907 9.3307E-05 0.10339 5.0587E-05 0.29409 0.00014389 489.625570917349 495.96372808457 52.069 0.62727 52.069 51.796 52.423 0 207 48 7 0 0 0 2.5518E-07 1 28873 83.106 83.106 1 2.8035 3.0483 0 48444000 12778000 35667000 35312 545 13383 13746 55194 55194 TSAQVAVFHLQEIAEDELAR 20 0 1 Unmodified _TSAQVAVFHLQEIAEDELAR_ 0 0 0 Q96KM6 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.3855 3 743.049963 2226.12806 73124.81 0.69233 0.00051443 0.554 0.00041165 1.2463 0.00092609 743.384316683625 746.387481499702 116.05 0.56364 116.05 115.76 116.33 0 112 36 6 0 0 0 4.6765E-07 1 75744 73.783 73.783 1 0.80298 0.81178 0 9767300 4701400 5065800 35313 1976 13384 13747 55195 55195 TSAQVVLDGLVDK 13 1 0 Unmodified _TSAQVVLDGLVDK_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 672.8708 2 672.872099 1343.72965 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.797 1 95.797 95.297 96.297 0 0 0 0 0.050555 1 58312 41.383 23.563 1 35314 1725 13385 13748 55196 55196 TSAQVVLDGLVDK 13 1 0 Unmodified _TSAQVVLDGLVDK_ 0 0 0 Q14008 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.3804 2 672.872099 1343.72965 NaN NaN NaN -0.45753 -0.00030786 NaN NaN NaN NaN 94.894 0.33881 94.894 94.77 95.108 0 0 0 0 0.016752 1 59022 49.632 39.045 1 NaN NaN 0 6584800 0 6584800 35315 1725 13385 13748 55197 55197 TSASLEMNQGVSEER 15 0 1 Oxidation (M) _TSASLEM(ox)NQGVSEER_ TSASLEM(1)NQGVSEER TSASLEM(117.79)NQGVSEER 0 1 0 Q4G1A1;A8K3X3;Q9H410;Q5JW53 Q4G1A1 Q4G1A1 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.3738 2 827.372866 1652.73118 68858.04 0.5932 0.0004908 0.20396 0.00016875 0.79716 0.00065955 827.874171147383 832.879008067797 27.902 0.28946 27.902 27.746 28.035 0 44 17 5 0 0 0 1.3982E-10 2 13008 117.79 111.26 1 1.0034 1.0298 0 10106000 5265600 4840400 35316 727 13386 13749 55198;55199 55198 563 TSASLEMNQGVSEER 15 0 1 Oxidation (M) _TSASLEM(ox)NQGVSEER_ TSASLEM(1)NQGVSEER TSASLEM(142.1)NQGVSEER 0 1 0 Q4G1A1;A8K3X3;Q9H410;Q5JW53 Q4G1A1 Q4G1A1 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.3734 2 827.372866 1652.73118 67547.2 0.49936 0.00041316 -0.082725 -6.8445E-05 0.41663 0.00034471 827.874008524696 832.377026589663 27.354 0.21739 27.354 27.223 27.441 -1.9073E-06 39 11 6 0 0 0 3.255E-22 3 12680 142.1 135.4 1 0.91685 0.92597 0 10092000 5258500 4833700 35317 727 13386 13749 55200;55201;55202 55202 563 TSDFNTFLAQEGCTK 15 1 0 Unmodified _TSDFNTFLAQEGCTK_ 0 0 0 E9PHZ2;A0A024R3C3;A0A024R394;Q9UHD1 E9PHZ2 E9PHZ2 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.8958 2 859.888152 1717.76175 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.716 1 83.716 83.216 84.216 0 0 0 0 0.0015908 1 50126 56.951 41.412 1 35318 130 13387 13750 55203 55203 TSDLIVLGLPWK 12 1 0 Unmodified _TSDLIVLGLPWK_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148;A0A087WXQ5;A0A087WV68;B1AKP7;G3V162;A0A087X260;A0A087WYY0;K7EJM5;A0A0A0N0N3;A0A0A0N0M3;K7EN94 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3922 2 671.39247 1340.77039 75463.44 0.98013 0.00065805 0.11976 8.0408E-05 1.0999 0.00073846 671.392404315796 675.39937773176 125.94 0.72308 125.94 125.64 126.36 -7.6294E-06 239 53 7 0 0 0 6.4581E-18 2 81793 143.7 138.15 1 1.0664 1.1121 0 29828000 12994000 16834000 35319 153 13388 13751 55204;55205 55205 TSDLIVLGLPWK 12 1 0 Unmodified _TSDLIVLGLPWK_ 0 0 0 A0A087WX29;B4DRW3;A0A0A0N0L3;A0A024R4E2;Q13148;A0A087WXQ5;A0A087WV68;B1AKP7;G3V162;A0A087X260;A0A087WYY0;K7EJM5;A0A0A0N0N3;A0A0A0N0M3;K7EN94 A0A087WX29 A0A087WX29 TARDBP;TDP43 TAR DNA-binding protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3935 2 671.39247 1340.77039 74912.34 0.82684 0.00055514 -0.0057268 -3.8449E-06 0.82112 0.00055129 671.392514891083 675.399524430505 125.45 0.86685 125.45 125.03 125.9 -7.6294E-06 273 59 10 0 0 0 7.2782E-13 3 83456 133.13 127.93 1 1.2206 1.2592 0 32713000 14651000 18062000 35320 153 13388 13751 55206;55207;55208 55207 TSEIYVHR 8 0 1 Unmodified _TSEIYVHR_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;B4DM03;A0A087WXU8;Q7Z4X3;Q7Z4W0;B4DGI6 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.7617 2 502.761623 1003.50869 86803.19 0.52239 0.00026264 0.60161 0.00030247 1.124 0.00056511 502.761826588488 507.765750050568 22.413 0.58218 22.413 22.263 22.845 0 98 36 5 0 0 0 0.00099026 1 8479 127.84 99.67 1 0.86937 0.88952 0 26313000 11818000 14495000 35321 993 13389 13752 55209 55209 TSEIYVHR 8 0 1 Unmodified _TSEIYVHR_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;B4DM03;A0A087WXU8;Q7Z4X3;Q7Z4W0;B4DGI6 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.7621 2 502.761623 1003.50869 85661.65 0.22615 0.0001137 0.52415 0.00026352 0.7503 0.00037722 502.761565476933 507.765784102146 22.097 0.46774 22.097 21.945 22.412 0 60 21 5 0 0 0 0.0010053 2 8150 130.77 94.064 1 0.56729 0.6292 0 42719000 18093000 24626000 35322 993 13389 13752 55210;55211 55211 TSEIYVHR 8 0 1 Unmodified _TSEIYVHR_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;B4DM03;A0A087WXU8;Q7Z4X3;Q7Z4W0;B4DGI6 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 338.8458 3 335.510174 1003.50869 105787.5 0.088887 2.9823E-05 0.066596 2.2344E-05 0.15548 5.2166E-05 335.510122252142 338.846208130812 22.1 0.33992 22.1 21.945 22.285 0 44 15 6 0 0 0 0.024453 2 8186 35.295 21.088 1 0.58255 0.58053 0 7113000 3328900 3784000 35323 993 13389 13752 55212;55213 55213 TSEIYVHR 8 0 1 Unmodified _TSEIYVHR_ 0 0 0 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;B4DM03;A0A087WXU8;Q7Z4X3;Q7Z4W0;B4DGI6 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.7619 2 502.761623 1003.50869 NaN NaN NaN 1.0674 0.00053665 NaN NaN NaN NaN 24.35 0.54241 24.35 24.204 24.746 1.9073E-06 0 0 0 0.0031672 1 8545 101.64 86.492 1 NaN NaN 0 1428100 1428100 0 35324 993 13389 13752 55214 55214 TSESVLSVEHGQPVESVLLFPSGGLLVSAGGR 32 0 1 Unmodified _TSESVLSVEHGQPVESVLLFPSGGLLVSAGGR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1074.2384 3 1070.23313 3207.67756 58273.44 0.58058 0.00062135 0.15531 0.00016622 0.73589 0.00078758 1070.5675324698 1073.90350827827 127.48 1.1591 127.48 126.93 128.09 0 573 69 12 0 0 0 0.015374 1 83291 17.657 17.657 1 0.89704 0.91762 0 35109000 17784000 17325000 35325 1936 13390 13753 55215 55215 TSESVLSVEHGQPVESVLLFPSGGLLVSAGGR 32 0 1 Unmodified _TSESVLSVEHGQPVESVLLFPSGGLLVSAGGR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1074.2385 3 1070.23313 3207.67756 58149.69 0.58116 0.00062197 0.12081 0.0001293 0.70197 0.00075127 1070.90177902356 1073.90339045486 126.95 1.234 126.95 126.38 127.62 7.6294E-06 668 76 11 0 0 0 5.556E-05 2 84509 34.829 34.829 1 0.91096 1.0345 0 48678000 24738000 23940000 35326 1936 13390 13753 55216;55217 55217 TSESVLSVEHGQPVESVLLFPSGGLLVSAGGR 32 0 1 Unmodified _TSESVLSVEHGQPVESVLLFPSGGLLVSAGGR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1073.5684 3 1070.23313 3207.67756 57947.63 0.30528 0.00032673 0.36424 0.00038983 0.66953 0.00071655 1070.56758835943 1073.90378123136 134.57 0.20377 134.57 134.45 134.66 0 47 6 12 0 0 0 2.5686E-21 2 82202 74.769 74.769 1 1.0564 0.91486 0 146560000 67044000 79518000 35327 1936 13390 13753 55218;55219 55218 TSESVLSVEHGQPVESVLLFPSGGLLVSAGGR 32 0 1 Unmodified _TSESVLSVEHGQPVESVLLFPSGGLLVSAGGR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1073.9038 3 1070.23313 3207.67756 58313.69 0.15689 0.00016791 0.39908 0.00042711 0.55598 0.00059502 1070.56789481121 1073.90416618185 134.52 0.21347 134.52 134.41 134.63 0 58 6 15 0 0 0 3.3664E-31 2 81286 96.46 96.46 1 1.1523 1.006 0 108400000 50516000 57882000 35328 1936 13390 13753 55220;55221 55220 TSFEDGSGECEVFCK 15 1 0 Unmodified _TSFEDGSGECEVFCK_ 0 0 0 B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2 B3KNM0 B3KNM0 HSPA4L Heat shock 70 kDa protein 4L ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 880.3553 2 876.348002 1750.68145 NaN NaN NaN -0.1807 -0.00015835 NaN NaN NaN NaN 65.331 0.27811 65.331 65.138 65.416 0 0 0 0 0.017418 2 37632 44.543 42.79 1 NaN NaN 0 4185400 0 4185400 35329 624 13391 13754 55222;55223 55223 TSFEDGSGECEVFCK 15 1 0 Unmodified _TSFEDGSGECEVFCK_ 0 0 0 B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2 B3KNM0 B3KNM0 HSPA4L Heat shock 70 kDa protein 4L ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.3554 2 876.348002 1750.68145 NaN NaN NaN -0.068159 -5.9731E-05 NaN NaN NaN NaN 64.314 0.35307 64.314 64.116 64.469 0 0 0 0 1.3569E-15 1 37824 119.45 116.94 1 NaN NaN 0 4290500 0 4290500 35330 624 13391 13754 55224 55224 TSFEIAELK 9 1 0 Unmodified _TSFEIAELK_ 0 0 0 O95619;F8W0J4 O95619 O95619 YEATS4 YEATS domain-containing protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.2806 2 519.279315 1036.54408 NaN NaN NaN -0.07535 -3.9128E-05 NaN NaN NaN NaN 82.356 0.46173 82.356 82.046 82.508 0 0 0 0 0.037468 1 49082 51.066 13.339 1 NaN NaN 0 8554700 8554700 0 35331 1430 13392 13755 55225 55225 TSFEIAELK 9 1 0 Unmodified _TSFEIAELK_ 0 0 0 O95619;F8W0J4 O95619 O95619 YEATS4 YEATS domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.2789 2 519.279315 1036.54408 85511.7 0.50802 0.0002638 -0.65176 -0.00033844 -0.14374 -7.4641E-05 519.278992271574 523.285243377022 81.212 0.4915 81.212 80.969 81.46 0 103 43 4 0 0 0 0.0049758 2 49679 67.897 24.089 1 0.61952 0.63704 0 9530300 5738000 3792300 35332 1430 13392 13755 55226;55227 55227 TSFFLGEVGNAAK 13 1 0 Unmodified _TSFFLGEVGNAAK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.3547 2 670.845884 1339.67722 NaN NaN NaN 0.42645 0.00028608 NaN NaN NaN NaN 93.637 0.40087 93.637 93.432 93.833 7.6294E-06 0 0 0 0.029984 1 56852 42.743 33.88 1 NaN NaN 0 13732000 0 13732000 35333 1194;1193 13393 13756 55228 55228 TSFFLGEVGNAAK 13 1 0 Unmodified _TSFFLGEVGNAAK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.8531 2 670.845884 1339.67722 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.958 1 92.958 92.458 93.458 -7.6294E-06 0 0 0 0.0007472 1 56346 80.916 60.216 1 35334 1194;1193 13393 13756 55229 55229 TSFFLGEVGNAAK 13 1 0 Unmodified _TSFFLGEVGNAAK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.8531 2 670.845884 1339.67722 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.821 1 91.821 91.321 92.321 7.6294E-06 0 0 0 2.5978E-10 1 56869 108.43 83.656 1 35335 1194;1193 13393 13756 55230 55230 TSFFLGEVGNAAK 13 1 0 Unmodified _TSFFLGEVGNAAK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.8536 2 670.845884 1339.67722 73005.9 0.66386 0.00044535 -0.11668 -7.8277E-05 0.54717 0.00036707 670.845438673654 674.85267316562 106.29 1.3314 106.29 105.75 107.08 -7.6294E-06 477 75 10 0 0 0 0.0018529 2 60841 63.073 63.073 1 1.826 1.4871 0 31395000 10779000 20615000 35336 1194;1193 13393 13756 55231;55232 55232 TSFFLGEVGNAAK 13 1 0 Unmodified _TSFFLGEVGNAAK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26 D3DUE6;D3DUE7 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.8526 2 670.845884 1339.67722 72619.16 0.63585 0.00042656 -0.12995 -8.7177E-05 0.5059 0.00033938 670.845625248375 674.852479727074 106.03 1.2923 106.03 105.61 106.9 0 556 79 10 0 0 0 0.00026638 1 59673 79.693 73.39 1 1.8967 1.551 0 26591000 9158000 17433000 35337 1194;1193 13393 13756 55233 55233 TSFFQALGITTK 12 1 0 Unmodified _TSFFQALGITTK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;F8VW21;G3V210;B4E3D5;Q8NHW5;F8VPE8 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 661.3657 2 657.358628 1312.7027 73924.56 0.74727 0.00049122 0.039618 2.6043E-05 0.78688 0.00051727 657.358494850061 661.365651175785 114.22 1.4617 114.22 113.62 115.08 0 542 101 8 0 0 0 6.5475E-05 4 72738 97.813 97.813 1 1.0478 1.2144 0 237980000 118150000 119830000 35338 345 13394 13757 55234;55235;55236;55237 55236 TSFFQALGITTK 12 1 0 Unmodified _TSFFQALGITTK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;F8VW21;G3V210;B4E3D5;Q8NHW5;F8VPE8 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.3583 2 657.358628 1312.7027 74173.98 0.62063 0.00040798 0.016026 1.0535E-05 0.63666 0.00041851 657.358486605456 661.365684679827 113.52 1.4249 113.52 113 114.42 -7.6294E-06 535 101 8 0 0 0 0.00020462 3 73430 79.693 79.693 1 1.0409 1.2162 0 281150000 138000000 143150000 35339 345 13394 13757 55238;55239;55240 55239 TSFFQALGITTK 12 1 0 Unmodified _TSFFQALGITTK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;F8VW21;G3V210;B4E3D5;Q8NHW5;F8VPE8 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.3663 2 657.358628 1312.7027 73513.05 0.94272 0.0006197 0.085002 5.5877E-05 1.0277 0.00067558 657.35860981964 661.365651056828 125.68 1.5162 125.68 125.14 126.66 0 312 58 10 0 0 0 1.1232E-17 2 75352 138.63 138.63 1 0.95491 0.81813 0 75363000 39596000 35767000 35340 345 13394 13757 55241;55242 55242 TSFFQALGITTK 12 1 0 Unmodified _TSFFQALGITTK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;F8VU65;Q6NSF2;F8VWS0;F8VW21;G3V210;B4E3D5;Q8NHW5;F8VPE8 Q53HW2 Q53HW2 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.3585 2 657.358628 1312.7027 74011.98 0.78383 0.00051526 0.022191 1.4587E-05 0.80603 0.00052985 657.358678873265 661.36560083908 125.41 1.5106 125.41 124.95 126.46 0 343 67 11 0 0 0 1.8469E-12 2 74285 125.74 125.74 1 0.92268 0.78463 0 78770000 39294000 39475000 35341 345 13394 13757 55243;55244 55244 TSFIQYLLEQEVPGSR 16 0 1 Unmodified _TSFIQYLLEQEVPGSR_ 0 0 0 A0A024R0S6;Q9NZN4;Q8NCJ3;B4DLA1 A0A024R0S6 A0A024R0S6 EHD2 EH domain-containing protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 938.9915 2 933.983441 1865.95233 NaN NaN NaN -0.69041 -0.00064483 NaN NaN NaN NaN 131.37 0.39638 131.37 131.19 131.58 0 0 0 0 3.409E-06 1 85628 82.362 67.16 1 NaN NaN 0 4105900 0 4105900 35342 57 13395 13758 55245 55245 TSFIQYLLEQEVPGSR 16 0 1 Unmodified _TSFIQYLLEQEVPGSR_ 0 0 0 A0A024R0S6;Q9NZN4;Q8NCJ3;B4DLA1 A0A024R0S6 A0A024R0S6 EHD2 EH domain-containing protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 939.4901 2 933.983441 1865.95233 NaN NaN NaN -0.38613 -0.00036064 NaN NaN NaN NaN 130.99 0.51031 130.99 130.66 131.17 0 0 0 0 3.1072E-06 1 87661 83.314 69.651 1 NaN NaN 0 5324100 0 5324100 35343 57 13395 13758 55246 55246 TSFLLNLR 8 0 1 Unmodified _TSFLLNLR_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.2891 2 482.284734 962.554916 89658.69 0.3636 0.00017536 0.50053 0.0002414 0.86412 0.00041675 482.284980482449 487.288960691699 98.317 0.9226 98.317 97.825 98.747 0 207 75 4 0 0 0 0.038748 1 59855 47.849 38.378 1 1.052 1.0885 0 20326000 8539000 11787000 35344 1088;1189 13396 13759 55247 55247 TSFLLNLR 8 0 1 Unmodified _TSFLLNLR_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.2888 2 482.284734 962.554916 88202.6 0.51872 0.00025017 0.083421 4.0233E-05 0.60214 0.0002904 482.284786812812 487.2887209853 97.225 0.90517 97.225 96.897 97.802 7.6294E-06 244 70 5 0 0 0 0.028279 1 60999 53.351 39.576 1 1.207 1.2847 0 24342000 12418000 11924000 35345 1088;1189 13396 13759 55248 55248 TSFSPCVPQCQTQGSYGSFTEQHR 24 0 1 Unmodified _TSFSPCVPQCQTQGSYGSFTEQHR_ 0 0 0 Q5T749 Q5T749 Q5T749 KPRP Keratinocyte proline-rich protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 930.7416 3 930.406264 2788.19696 NaN NaN NaN 0.43245 0.00040236 NaN NaN NaN NaN 72.439 0.26198 72.439 72.319 72.581 7.6294E-06 0 0 0 0.032205 1 42381 24.78 21.814 1 NaN NaN 0 5289500 5289500 0 35346 1824 13397 13760 55249 55249 TSFTQEQIEALEK 13 1 0 Unmodified _TSFTQEQIEALEK_ 0 0 0 D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367;Q59GD2 D1KF47 D1KF47 PAX6 Paired box protein Pax-6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.3835 2 762.383028 1522.7515 NaN NaN NaN -0.77488 -0.00059076 NaN NaN NaN NaN 80.205 0.47431 80.205 80.017 80.491 0 0 0 0 9.4939E-09 1 48820 105.83 87.051 1 NaN NaN 0 11109000 11109000 0 35347 927 13398 13761 55250 55250 TSFTQEQIEALEK 13 1 0 Unmodified _TSFTQEQIEALEK_ 0 0 0 D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367;Q59GD2 D1KF47 D1KF47 PAX6 Paired box protein Pax-6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 762.3829 2 762.383028 1522.7515 70175.83 0.64311 0.0004903 -0.80657 -0.00061491 -0.16346 -0.00012462 762.382983311767 766.389170594949 93.665 0.66363 93.665 93.441 94.104 -7.6294E-06 193 43 7 0 0 0 0.0035575 2 52330 49.448 43.415 1 1.0219 0.80691 0 4104800 1918300 2186500 35348 927 13398 13761 55251;55252 55252 TSFTQEQIEALEK 13 1 0 Unmodified _TSFTQEQIEALEK_ 0 0 0 D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367;Q59GD2 D1KF47 D1KF47 PAX6 Paired box protein Pax-6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.3841 2 762.383028 1522.7515 70154.34 0.74376 0.00056703 -0.7118 -0.00054266 0.031957 2.4364E-05 762.382989867526 766.389252569138 93.727 0.64163 93.727 93.405 94.047 0 222 42 7 0 0 0 0.00013003 1 51458 73.9 73.9 1 1.0541 0.82543 0 3752100 2136400 1615700 35349 927 13398 13761 55253 55253 TSGGLLSEAPNEK 13 1 0 Unmodified _TSGGLLSEAPNEK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8313 2 651.830431 1301.64631 74355.16 0.7845 0.00051136 0.2814 0.00018343 1.0659 0.00069479 651.830556026517 655.83770330261 47.956 0.62964 47.956 47.682 48.311 0 224 55 6 0 0 0 1.0293E-18 2 26099 141.71 133.77 1 1.1552 1.2768 0 57252000 25405000 31847000 35350 1068 13399 13762 55254;55255 55255 TSGGLLSEAPNEK 13 1 0 Unmodified _TSGGLLSEAPNEK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8309 2 651.830431 1301.64631 74764.5 0.81297 0.00052992 0.083678 5.4544E-05 0.89665 0.00058446 651.830330651364 655.837487826619 46.855 0.51215 46.855 46.599 47.112 0 232 45 7 0 0 0 0.00015608 2 25885 85.958 79.07 1 1.0677 1.1837 0 47403000 28178000 19225000 35351 1068 13399 13762 55256;55257 55257 TSGGLLSEAPNEK 13 1 0 Unmodified _TSGGLLSEAPNEK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.8381 2 651.830431 1301.64631 73923.65 0.75621 0.00049292 0.34007 0.00022167 1.0963 0.00071459 651.830647754003 655.837955464017 55.341 0.99552 55.341 54.774 55.77 3.8147E-06 243 60 7 0 0 0 0.013678 1 27589 38.021 33.57 1 1.0709 0.85278 0 6727100 3191800 3535300 35352 1068 13399 13762 55258 55258 TSGGLLSEAPNEK 13 1 0 Unmodified _TSGGLLSEAPNEK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.8396 2 651.830431 1301.64631 73993.56 0.55925 0.00036453 0.61805 0.00040287 1.1773 0.0007674 651.830550851703 655.838398453485 55.76 1.1043 55.76 55.425 56.529 0 178 42 6 0 0 0 0.002308 1 27274 54.286 54.286 1 1.0206 0.83265 0 6044700 2994200 3050500 35353 1068 13399 13762 55259 55259 TSGHLLLGVVR 11 0 1 Unmodified _TSGHLLLGVVR_ 0 0 0 A0A024R9J0;O60216;B3KUT8;F6KSS9;Q9H4I0;A0A140T8W2;E5RJW1;E5RJK5;E5RFV8;E5RIN7 A0A024R9J0 A0A024R9J0 RAD21;RAD21L;RAD21L1 Double-strand-break repair protein rad21 homolog;Double-strand-break repair protein rad21-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 384.5681 3 384.568024 1150.68224 98662.52 0.13165 5.0628E-05 -0.37507 -0.00014424 -0.24342 -9.3611E-05 384.567642687898 387.904236525763 64.541 0.69867 64.541 64.173 64.872 0 139 62 4 0 0 0 0.0020352 1 37916 54.094 54.094 1 0.35138 0.35423 0 6380500 4727300 1653200 35354 280 13400 13763 55260 55260 TSGNVEDDLIIFPDDCEFK 19 1 0 Unmodified _TSGNVEDDLIIFPDDCEFK_ 0 0 0 Q68E00;Q16186;B4DMP7 Q68E00 Q68E00 DKFZp686G2045;ADRM1 Proteasomal ubiquitin receptor ADRM1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1111.509 2 1107.49899 2212.98343 NaN NaN NaN -0.2159 -0.00023911 NaN NaN NaN NaN 119.13 0.30295 119.13 118.96 119.26 7.6294E-06 0 0 0 0.0079036 1 76551 41.092 35.813 1 NaN NaN 0 3099000 0 3099000 35355 1768 13401 13764 55261 55261 TSGNVEDDLIIFPDDCEFK 19 1 0 Unmodified _TSGNVEDDLIIFPDDCEFK_ 0 0 0 Q68E00;Q16186;B4DMP7 Q68E00 Q68E00 DKFZp686G2045;ADRM1 Proteasomal ubiquitin receptor ADRM1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1111.5078 2 1107.49899 2212.98343 NaN NaN NaN 0.37029 0.0004101 NaN NaN NaN NaN 118.67 0.32109 118.67 118.54 118.86 0 0 0 0 0.033242 1 78103 31.526 26.349 1 NaN NaN 0 3819200 0 3819200 35356 1768 13401 13764 55262 55262 TSGSVYITLK 10 1 0 Unmodified _TSGSVYITLK_ 0 0 0 P37108;H0YLA2 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.8076 2 534.800414 1067.58628 NaN NaN NaN -0.51224 -0.00027394 NaN NaN NaN NaN 64.501 0.58923 64.501 64.237 64.827 0 0 0 0 0.0048831 1 38096 70.908 49.38 1 NaN NaN 0 10770000 0 10770000 35357 1549 13402 13765 55263 55263 TSIDAYDNFDNISLAQR 17 0 1 Unmodified _TSIDAYDNFDNISLAQR_ 0 0 0 A0A087WVQ6;Q00610;K7EJJ5;J3KS13 A0A087WVQ6 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 976.9661 2 971.960694 1941.90683 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.79 1 101.79 101.29 102.29 -7.6294E-06 0 0 0 0.0039251 1 62601 52.555 43.366 1 35358 419 13403 13766 55264 55264 TSIDAYDNFDNISLAQR 17 0 1 Unmodified _TSIDAYDNFDNISLAQR_ 0 0 0 A0A087WVQ6;Q00610;K7EJJ5;J3KS13 A0A087WVQ6 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.4692 2 971.960694 1941.90683 61103.01 0.35738 0.00034736 0.28448 0.0002765 0.64186 0.00062386 971.960857139791 976.965585483346 101.32 0.41457 101.32 101.08 101.49 7.6294E-06 73 33 5 0 0 0 0.00015864 2 63709 53.967 53.967 1 1.3945 1.4003 0 6683300 2954200 3729000 35359 419 13403 13766 55265;55266 55265 TSIIEAQYLR 10 0 1 Unmodified _TSIIEAQYLR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.3309 2 597.32987 1192.64519 76951 0.85209 0.00050898 0.19254 0.00011501 1.0446 0.00062398 597.329848360325 602.334129500739 79.59 0.85709 79.59 79.252 80.109 0 300 74 6 0 0 0 0.00061895 2 47102 83.948 64.692 1 1.0441 1.158 0 67181000 31841000 35340000 35360 1741 13404 13767 55267;55268 55268 TSIIEAQYLR 10 0 1 Unmodified _TSIIEAQYLR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.3347 2 597.32987 1192.64519 75648.59 0.42981 0.00025674 0.65725 0.00039259 1.0871 0.00064933 597.329986342215 602.334303815483 78.454 0.63681 78.454 78.133 78.77 0 277 54 7 0 0 0 2.0049E-09 2 47486 129.42 99.167 1 1.0943 1.2466 0 105090000 50305000 54789000 35361 1741 13404 13767 55269;55270 55270 TSIIEAQYLR 10 0 1 Unmodified _TSIIEAQYLR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.3345 2 597.32987 1192.64519 78572.27 0.76231 0.00045535 0.50084 0.00029916 1.2631 0.00075451 597.329904636677 602.334134388332 91.194 0.75249 91.194 90.883 91.635 0 240 50 8 0 0 0 0.0032316 2 50519 65.465 51.328 1 1.2297 1.0182 0 19942000 7994200 11948000 35362 1741 13404 13767 55271;55272 55272 TSIIEAQYLR 10 0 1 Unmodified _TSIIEAQYLR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.3349 2 597.32987 1192.64519 77812.19 0.54833 0.00032753 0.74295 0.00044379 1.2913 0.00077132 597.329931879259 602.334300143667 91.018 0.88229 91.018 90.689 91.572 7.6294E-06 243 57 9 0 0 0 0.00040156 2 49612 87.476 72.81 1 1.237 1.0281 0 15433000 6862900 8570300 35363 1741 13404 13767 55273;55274 55273 TSILAAANPISGHYDR 16 0 1 Unmodified _TSILAAANPISGHYDR_ 0 0 0 Q14566;Q4ZG57;B4DRF6 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.2961 3 562.625037 1684.85328 81049.99 0.61187 0.00034425 -0.098385 -5.5354E-05 0.51348 0.0002889 562.959155694957 565.961256499125 78.579 0.59998 78.579 78.388 78.988 0 176 52 5 0 0 0 0.00012735 1 46547 40.179 40.179 1 1.6344 1.6353 0 16887000 5510100 11377000 35364 1734 13405 13768 55275 55275 TSILAAANPISGHYDR 16 0 1 Unmodified _TSILAAANPISGHYDR_ 0 0 0 Q14566;Q4ZG57;B4DRF6 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.4329 2 843.433918 1684.85328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.122 1 77.122 76.622 77.622 0 0 0 0 0.005129 1 46617 51.841 41.231 1 35365 1734 13405 13768 55276 55276 TSILAAANPISGHYDR 16 0 1 Unmodified _TSILAAANPISGHYDR_ 0 0 0 Q14566;Q4ZG57;B4DRF6 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.6255 3 562.625037 1684.85328 81304.65 0.32572 0.00018326 -0.058095 -3.2685E-05 0.26762 0.00015057 562.624991983002 566.295369493843 89.449 0.44723 89.449 89.228 89.676 7.6294E-06 113 28 6 0 0 0 0.060596 1 48625 13.168 13.168 1 0.77718 0.68797 0 2416100 1373800 1042300 35366 1734 13405 13768 55277 55277 TSLALDESLFR 11 0 1 Unmodified _TSLALDESLFR_ 0 0 0 H0YJH9;B4DEH8;G3V4T2;Q86U42 H0YJH9 H0YJH9 PABPN1 Polyadenylate-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.3328 2 626.33261 1250.65067 78449.02 0.68921 0.00043167 -1.3799 -0.0008643 -0.69073 -0.00043263 626.331869295299 631.335319326712 104.81 0.48506 104.81 104.57 105.06 0 118 40 5 0 0 0 0.019169 1 64818 44.425 34.053 1 1.9899 2.0084 0 9546300 3365900 6180400 35367 966 13406 13769 55278 55278 TSLALDESLFR 11 0 1 Unmodified _TSLALDESLFR_ 0 0 0 H0YJH9;B4DEH8;G3V4T2;Q86U42 H0YJH9 H0YJH9 PABPN1 Polyadenylate-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.3382 2 626.33261 1250.65067 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.64 1 104.64 104.14 105.14 0 0 0 0 4.8559E-05 1 64681 82.749 59.321 1 35368 966 13406 13769 55279 55279 TSLALDESLFR 11 0 1 Unmodified _TSLALDESLFR_ 0 0 0 H0YJH9;B4DEH8;G3V4T2;Q86U42 H0YJH9 H0YJH9 PABPN1 Polyadenylate-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3374 2 626.33261 1250.65067 78333.38 0.62389 0.00039076 -1.389 -0.00087 -0.76516 -0.00047924 626.332015106588 631.334945455764 104.1 0.73417 104.1 103.71 104.45 -7.6294E-06 179 56 5 0 0 0 0.0012874 2 65734 68.657 68.657 1 1.8379 1.8273 0 7586500 2750300 4836200 35369 966 13406 13769 55280;55281 55280 TSLASGAQVNPTTQDNK 17 1 0 Unmodified _TSLASGAQVNPTTQDNK_ 0 0 0 A0A087X0P0;Q02224 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 870.4349 2 866.429029 1730.84351 69542.5 0.99527 0.00086233 -0.67059 -0.00058102 0.32468 0.00028131 866.42812604803 870.936872908343 37.96 0.30141 37.96 37.814 38.116 0 52 25 4 0 0 0 6.4384E-09 2 19395 101.32 101.32 1 1.3575 1.3752 0 6697400 2239700 4457700 35370 445 13407 13770 55282;55283 55282 TSLASGAQVNPTTQDNK 17 1 0 Unmodified _TSLASGAQVNPTTQDNK_ 0 0 0 A0A087X0P0;Q02224 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 870.4368 2 866.429029 1730.84351 NaN NaN NaN 0.19195 0.00016631 NaN NaN NaN NaN 37.067 0.29935 37.067 36.884 37.183 0 0 0 0 1.1031E-06 1 19105 83.204 69.776 1 NaN NaN 0 3383800 0 3383800 35371 445 13407 13770 55284 55284 TSLASGAQVNPTTQDNK 17 1 0 Unmodified _TSLASGAQVNPTTQDNK_ 0 0 0 A0A087X0P0;Q02224 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 870.4372 2 866.429029 1730.84351 65976.88 0.29392 0.00025466 0.14908 0.00012917 0.443 0.00038383 866.429004313589 870.436683477899 43.913 0.70849 43.913 43.505 44.213 3.8147E-06 197 47 7 0 0 0 0.014727 1 20207 28.727 28.727 1 1.8284 1.4839 0 2843900 926460 1917400 35372 445 13407 13770 55285 55285 TSLEVPEINALLLVPK 16 1 0 Unmodified _TSLEVPEINALLLVPK_ 0 0 0 Q86W42 Q86W42 Q86W42 THOC6 THO complex subunit 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.5211 2 868.513845 1735.01314 67272.51 0.76761 0.00066668 0.35708 0.00031013 1.1247 0.0009768 868.513667452696 872.520773709172 133.14 0.24606 133.14 132.98 133.23 1.5259E-05 39 8 7 0 0 0 0.0001547 1 89289 74.944 74.944 1 1.0331 1.0589 0 11811000 5269700 6541400 35373 1886 13408 13771 55286 55286 TSLGNVVLLLK 11 1 0 Unmodified _TSLGNVVLLLK_ 0 0 0 Q9P186;Q5SQH5;A0A140T8Y5;B4DZ28;Q5SQH4;O60231 Q9P186 Q9P186 DHX16;DBP2 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.8756 2 578.868631 1155.72271 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.45 1 115.45 114.95 115.95 0 0 0 0 0.00076242 1 73499 71.379 50.754 1 35374 597 13409 13772 55287 55287 TSLGNVVLLLK 11 1 0 Unmodified _TSLGNVVLLLK_ 0 0 0 Q9P186;Q5SQH5;A0A140T8Y5;B4DZ28;Q5SQH4;O60231 Q9P186 Q9P186 DHX16;DBP2 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.8757 2 578.868631 1155.72271 84426.16 0.85993 0.00049779 -0.15932 -9.2223E-05 0.70061 0.00040556 578.868509199094 582.875481395881 114.91 0.46387 114.91 114.64 115.11 7.6294E-06 86 29 4 0 0 0 0.00089108 2 74788 71.692 61.461 1 0.56813 0.58485 0 4881100 2711400 2169700 35375 597 13409 13772 55288;55289 55289 TSLGNVVLLLK 11 1 0 Unmodified _TSLGNVVLLLK_ 0 0 0 Q9P186;Q5SQH5;A0A140T8Y5;B4DZ28;Q5SQH4;O60231 Q9P186 Q9P186 DHX16;DBP2 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.8692 2 578.868631 1155.72271 82059.77 0.56862 0.00032915 0.12698 7.3502E-05 0.69559 0.00040266 578.868615875825 582.875745545595 127.44 0.41095 127.44 127.24 127.65 0 39 17 4 0 0 0 0.059605 1 75878 33.378 33.027 1 0.60467 0.53497 0 871770 572640 299130 35376 597 13409 13772 55290 55290 TSLMNQYVNK 10 1 0 Oxidation (M) _TSLM(ox)NQYVNK_ TSLM(1)NQYVNK TSLM(56.66)NQYVNK 0 1 0 A0A158RFU6;P51149;C9J592;C9J8S3;B4DPH9;C9IZZ0;C9J4V0;C9J4S4;C9J7D1 A0A158RFU6 A0A158RFU6 RAB7A Ras-related protein Rab-7a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3057 2 607.297713 1212.58087 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.67 1 28.67 28.17 29.17 0 0 0 0 0.0055669 1 13735 56.659 38.219 1 35377 628 13410 13773 55291 55291 488 TSLPWQGLK 9 1 0 Unmodified _TSLPWQGLK_ 0 0 0 V9HW00;P48729;B4E1D9;Q05DL3;D6REM4;H0Y9X2;U3KQK7;B4DFH4;Q6PJ06;E7ETM0;B4DER9;U3KPX3 V9HW00 V9HW00 HEL-S-77p;CSNK1A1 Casein kinase I isoform alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.2975 2 515.290017 1028.56548 85876.21 0.75223 0.00038762 -0.056223 -2.8971E-05 0.69601 0.00035865 515.289827969326 519.297076140049 84.318 0.56567 84.318 84.105 84.67 0 135 43 4 0 0 0 0.0018358 2 50616 80.229 70.15 1 1.2014 1.2405 0 29067000 14919000 14148000 35378 1577 13411 13774 55292;55293 55293 TSLPWQGLK 9 1 0 Unmodified _TSLPWQGLK_ 0 0 0 V9HW00;P48729;B4E1D9;Q05DL3;D6REM4;H0Y9X2;U3KQK7;B4DFH4;Q6PJ06;E7ETM0;B4DER9;U3KPX3 V9HW00 V9HW00 HEL-S-77p;CSNK1A1 Casein kinase I isoform alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.29 2 515.290017 1028.56548 86061.42 0.47967 0.00024717 0.24562 0.00012657 0.7253 0.00037374 515.290240860995 519.297235209329 83.252 0.51772 83.252 82.976 83.494 0 131 38 5 0 0 0 0.031751 1 50961 45.335 27.3 1 1.2777 1.3343 0 19242000 8309900 10933000 35379 1577 13411 13774 55294 55294 TSNFALVGSYTLSLSSVGNTK 21 1 0 Unmodified _TSNFALVGSYTLSLSSVGNTK_ 0 0 0 B4DSL6;A8K5D9;A0A024RA49;Q9NQW6;H7C1C2;H7C3S1 B4DSL6 B4DSL6 ANLN Actin-binding protein anillin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1077.5632 2 1073.55496 2145.09536 NaN NaN NaN 0.47417 0.00050905 NaN NaN NaN NaN 116.76 0.15355 116.76 116.73 116.88 0 0 0 0 0.021565 1 76463 30.543 22.999 1 NaN NaN 0 3528400 0 3528400 35380 294 13412 13775 55295 55295 TSNPLVLEEASASQAGSR 18 0 1 Unmodified _TSNPLVLEEASASQAGSR_ 0 0 0 B4DRU9;A0A0S2Z5L1;Q9NUQ8;A0A0S2Z645 B4DRU9 B4DRU9 ABCF3 ATP-binding cassette sub-family F member 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.9609 2 908.955411 1815.89627 NaN NaN NaN 0.25933 0.00023572 NaN NaN NaN NaN 73.038 0.38246 73.038 72.813 73.195 0 0 0 0 4.7848E-17 1 43749 110.25 93.874 1 NaN NaN 0 4861300 0 4861300 35381 583 13413 13776 55296 55296 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M) _TSPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR TSPEM(95.02)DIQNPDDGAR 0 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 836.3614 2 831.357216 1660.69988 66519.61 1.0455 0.00086919 -0.33756 -0.00028063 0.70795 0.00058856 831.357138790016 836.361059557601 33.428 0.55885 33.428 33.133 33.692 0 318 54 8 0 0 0 3.5425E-06 2 16518 95.018 91.255 1 1.6976 1.9136 0 98708000 31743000 66965000 35382 1569 13414 13777 55297;55298 55297 1345 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M) _TSPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR TSPEM(202.27)DIQNPDDGAR 0 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.3574 2 831.357216 1660.69988 66519.62 0.60684 0.0005045 -0.23507 -0.00019543 0.37177 0.00030907 831.357000270609 836.361272769662 33.946 0.55956 33.946 33.644 34.203 0 358 53 8 0 0 0 8.318E-71 2 16944 202.27 202.27 1 1.7854 2.0167 0 101750000 32715000 69032000 35383 1569 13414 13777 55299;55300 55300 1345 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M) _TSPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR TSPEM(93.62)DIQNPDDGAR 0 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.8629 2 831.357216 1660.69988 66317.96 0.52052 0.00043273 -0.37291 -0.00031002 0.14761 0.00012272 831.357116073522 836.361107704298 32.87 0.46892 32.87 32.591 33.06 0 292 43 9 0 0 0 4.4405E-06 2 16251 93.623 87.382 1 1.7704 2.0131 0 120360000 45372000 74985000 35384 1569 13414 13777 55301;55302 55301 1345 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M) _TSPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR TSPEM(150.14)DIQNPDDGAR 0 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.3619 2 831.357216 1660.69988 66454.53 0.52309 0.00043487 -0.049554 -4.1197E-05 0.47353 0.00039368 831.357277090728 836.361449403594 33.244 0.58261 33.244 33.01 33.593 0 346 50 10 0 0 0 1.6465E-23 3 16730 150.14 150.14 1 1.8066 2.0645 0 152980000 54160000 98822000 35385 1569 13414 13777 55303;55304;55305 55303 1345 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M) _TSPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR TSPEM(60.16)DIQNPDDGAR 0 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 836.3615 2 831.357216 1660.69988 64797.41 0.42117 0.00035014 0.067904 5.6453E-05 0.48907 0.00040659 831.357570178233 836.361606037661 38.779 0.54963 38.779 38.5 39.05 0 276 42 8 0 0 0 0.00015175 1 17598 60.157 60.157 1 1.9659 1.627 0 19787000 7448700 12338000 35386 1569 13414 13777 55306 55306 1345 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M) _TSPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR TSPEM(70.56)DIQNPDDGAR 0 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 836.3613 2 831.357216 1660.69988 65381.66 0.33243 0.00027637 0.13767 0.00011445 0.4701 0.00039082 831.357441677675 836.361628747424 39.26 0.71925 39.26 39.04 39.76 0 357 55 9 0 0 0 0.00010872 1 18029 70.563 70.563 1 1.9194 1.5957 0 21554000 6793500 14760000 35387 1569 13414 13777 55307 55307 1345 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M) _TSPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR TSPEM(57.8)DIQNPDDGAR 0 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 836.3627 2 831.357216 1660.69988 66671.02 0.58569 0.00048692 -0.039482 -3.2823E-05 0.54621 0.00045409 831.357066443021 836.361590736017 57.98 0.65094 57.98 57.674 58.325 0 252 51 7 0 0 0 0.00020511 1 29440 57.802 57.802 1 3.5428 3.0217 0 5609100 1427700 4181400 35388 1569 13414 13777 55308 55308 1345 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M) _TSPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR TSPEM(67.25)DIQNPDDGAR 0 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 836.3621 2 831.357216 1660.69988 65997.9 0.40526 0.00033691 -0.023686 -1.9692E-05 0.38157 0.00031722 831.357405084303 836.361458974404 39.114 0.5313 39.114 38.852 39.384 3.8147E-06 282 41 9 0 0 0 0.00010768 2 17284 73.624 73.624 1 1.9503 1.6916 0 23887000 7851300 16036000 35389 1569 13414 13777 55309;55310 55309 1345 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M) _TSPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR TSPEM(61.11)DIQNPDDGAR 0 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.3583 2 831.357216 1660.69988 65997.91 0.41662 0.00034636 0.12478 0.00010374 0.5414 0.0004501 831.357578044791 836.36153560578 39.666 0.68187 39.666 39.323 40.005 0 351 52 9 0 0 0 0.00013016 2 17729 61.11 61.11 1 1.9768 1.689 0 20298000 7332300 12966000 35390 1569 13414 13777 55311;55312 55312 1345 TSPEMDIQNPDDGAR 15 0 1 Unmodified _TSPEMDIQNPDDGAR_ 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 823.8614 2 823.359758 1644.70496 72425.12 0.70637 0.0005816 0.27775 0.00022869 0.98412 0.00081029 823.359743864771 828.364305052734 49.127 0.4383 49.127 48.912 49.35 3.8147E-06 89 37 4 0 0 0 0.0002248 2 27586 71.176 68.443 1 0.80876 0.80023 0 12399000 6704800 5694300 35391 1569 13414 13778 55313;55314 55314 TSPEMDIQNPDDGAR 15 0 1 Unmodified _TSPEMDIQNPDDGAR_ 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 828.3665 2 823.359758 1644.70496 65457.82 0.80947 0.00066648 -0.29492 -0.00024282 0.51455 0.00042366 823.359694885807 828.363756453392 57.967 0.82752 57.967 57.611 58.439 0 425 64 9 0 0 0 0.00066869 4 29298 52.555 52.555 1 3.1455 2.6133 0 21256000 4913900 16342000 35392 1569 13414 13778 55315;55316;55317;55318 55315 TSPEMDIQNPDDGAR 15 0 1 Unmodified _TSPEMDIQNPDDGAR_ 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 823.3604 2 823.359758 1644.70496 65645.35 0.63893 0.00052607 -0.26317 -0.00021668 0.37576 0.00030939 823.35954006791 828.3638303465 58.65 1.0571 58.65 58.171 59.228 3.8147E-06 474 81 9 0 0 0 0.00066869 4 29086 52.555 52.555 1 3.1157 2.596 0 15806000 3958600 11848000 35393 1569 13414 13778 55319;55320;55321;55322 55319 TSPFELYQFFVR 12 0 1 Unmodified _TSPFELYQFFVR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 772.397 2 767.390459 1532.76637 70053.05 0.94483 0.00072505 0.28752 0.00022064 1.2324 0.0009457 767.390345006164 772.394601503575 132.51 0.64861 132.51 132.23 132.88 0 144 40 5 0 0 0 0.00088952 1 86527 64.297 53.545 1 1.6256 1.6609 0 6722000 3195000 3527000 35394 1293 13415 13779 55323 55323 TSPFELYQFFVR 12 0 1 Unmodified _TSPFELYQFFVR_ 0 0 0 H0YHS6;Q9Y2Z4 H0YHS6 H0YHS6 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 772.8967 2 767.390459 1532.76637 70029.27 0.91069 0.00069885 0.20913 0.00016048 1.1198 0.00085933 767.390403031607 772.394853878008 132.06 0.70874 132.06 131.72 132.42 0 178 46 6 0 0 0 0.00088952 2 88411 64.297 58.127 1 1.6802 1.6908 0 9319500 3834400 5485000 35395 1293 13415 13779 55324;55325 55324 TSPHGILDILVHER 14 0 1 Unmodified _TSPHGILDILVHER_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.963 3 529.62649 1585.85764 81016.32 0.50784 0.00026896 0.035191 1.8638E-05 0.54303 0.0002876 529.626467879389 532.962593262028 106.74 0.68329 106.74 106.44 107.13 7.6294E-06 205 43 8 0 0 0 0.00012339 2 60932 61.097 61.097 1 2.2246 1.8811 0 30460000 9147600 21312000 35396 1945 13416 13780 55326;55327 55326 TSPHGILDILVHER 14 0 1 Unmodified _TSPHGILDILVHER_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 533.2972 3 529.62649 1585.85764 82217.79 0.5044 0.00026714 -0.13511 -7.1556E-05 0.36929 0.00019559 529.626378740559 532.962526570675 106.25 0.59791 106.25 106 106.6 0 201 36 8 0 0 0 7.2809E-05 3 59742 64.136 58.708 1 2.462 2.1427 0 24786000 7165500 17621000 35397 1945 13416 13780 55328;55329;55330 55329 TSQDFLFSQLQYLPFSNK 18 1 0 Unmodified _TSQDFLFSQLQYLPFSNK_ 0 0 0 Q92621;B4DE72;U3KQ97 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1086.0464 2 1082.04149 2162.06842 NaN NaN NaN 0.15836 0.00017136 NaN NaN NaN NaN 131.97 0.39328 131.97 131.78 132.18 0 0 0 0 0.011228 1 88275 41.092 35.813 1 NaN NaN 0 4666300 0 4666300 35398 1950 13417 13781 55331 55331 TSQDYQALTVHDNLAMK 17 1 0 Oxidation (M) _TSQDYQALTVHDNLAM(ox)K_ TSQDYQALTVHDNLAM(1)K TSQDYQALTVHDNLAM(58.09)K 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.9796 3 650.97904 1949.91529 73638.68 0.89233 0.00058089 0.012434 8.0943E-06 0.90476 0.00058898 650.979023664195 653.650325757558 56.366 1.0838 56.366 55.724 56.808 -3.8147E-06 498 90 9 0 0 0 3.0093E-05 1 31619 58.09 58.09 1 1.1223 1.2708 0 100120000 50900000 49220000 35399 1995 13418 13782 55332 55332 1828 TSQDYQALTVHDNLAMK 17 1 0 Oxidation (M) _TSQDYQALTVHDNLAM(ox)K_ TSQDYQALTVHDNLAM(1)K TSQDYQALTVHDNLAM(66.83)K 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.9849 3 650.97904 1949.91529 73978.3 0.5912 0.00038486 -0.057644 -3.7525E-05 0.53356 0.00034734 650.979067152904 653.650469033913 55.291 0.78677 55.291 54.937 55.724 3.8147E-06 411 58 10 0 0 0 1.8721E-05 1 31509 66.826 64.909 1 1.094 1.2224 0 91359000 38318000 53041000 35400 1995 13418 13782 55333 55333 1828 TSQGSSSFQTTLSAWK 16 1 0 Unmodified _TSQGSSSFQTTLSAWK_ 0 0 0 B4DZL4;A0A024RCG4;Q92674;Q5JX02;Q5JX01 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.416 2 858.415391 1714.81623 66499.55 0.47436 0.0004072 0.57742 0.00049567 1.0518 0.00090286 858.917237368855 862.422654491789 97.752 0.80706 97.752 97.324 98.131 7.6294E-06 168 45 5 0 0 0 0.058671 1 54199 22.321 22.321 1 1.3857 1.0921 0 3245000 1610700 1634300 35401 360 13419 13783 55334 55334 TSQNSELNNMQDLVEDYK 18 1 0 Oxidation (M) _TSQNSELNNM(ox)QDLVEDYK_ TSQNSELNNM(1)QDLVEDYK TSQNSELNNM(74.77)QDLVEDYK 0 1 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1072.4745 2 1072.47605 2142.93754 NaN NaN NaN -0.34069 -0.00036538 NaN NaN NaN NaN 65.782 0.27795 65.782 65.625 65.903 0 0 0 0 1.3177E-06 1 37864 74.769 61.761 1 NaN NaN 0 3866800 3866800 0 + 35402 1166 13420 13784 55335 55335 887 TSQNSELNNMQDLVEDYK 18 1 0 Oxidation (M) _TSQNSELNNM(ox)QDLVEDYK_ TSQNSELNNM(1)QDLVEDYK TSQNSELNNM(49.33)QDLVEDYK 0 1 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1072.4771 2 1072.47605 2142.93754 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.649 1 64.649 64.149 65.149 0 0 0 0 0.002454 1 38070 49.333 41.789 1 + 35403 1166 13420 13784 55336 55336 887 TSQNSELNNMQDLVEDYKK 19 2 0 Oxidation (M) _TSQNSELNNM(ox)QDLVEDYKK_ TSQNSELNNM(1)QDLVEDYKK TSQNSELNNM(53.77)QDLVEDYKK 0 1 1 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.0181 3 758.018112 2271.03251 NaN NaN NaN -0.14514 -0.00011002 NaN NaN NaN NaN 50.166 0.32831 50.166 50.046 50.375 0 0 0 0 0.00011312 2 27645 53.773 50.333 1 NaN NaN 0 8462400 8462400 0 + 35404 1166 13421 13785 55337;55338 55337 887 TSQNSELNNMQDLVEDYKK 19 2 0 Unmodified _TSQNSELNNMQDLVEDYKK_ 0 0 1 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.6874 3 752.686473 2255.03759 NaN NaN NaN -0.18709 -0.00014082 NaN NaN NaN NaN 98.499 0.76202 98.499 98.191 98.953 0 0 0 0 0.038141 1 55453 15.725 13.076 1 NaN NaN 0 5541400 5541400 0 + 35405 1166 13421 13786 55339 55339 TSQNSELNNMQDLVEDYKK 19 2 0 Unmodified _TSQNSELNNMQDLVEDYKK_ 0 0 1 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.0203 3 752.686473 2255.03759 NaN NaN NaN -0.05055 -3.8049E-05 NaN NaN NaN NaN 98.4 0.67107 98.4 98.114 98.785 0 0 0 0 0.0098885 1 54587 20.154 19.418 1 NaN NaN 0 5981500 5981500 0 + 35406 1166 13421 13786 55340 55340 TSQPPVPQGEAEEDSQGK 18 1 0 Unmodified _TSQPPVPQGEAEEDSQGK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 942.9351 2 942.434509 1882.85446 66167.44 0.66082 0.00062278 -0.4174 -0.00039337 0.24342 0.00022941 942.935187832931 946.441724933782 30.92 0.30324 30.92 30.752 31.055 0 91 25 5 0 0 0 0.00084967 2 15155 40.066 32.342 1 0.66635 0.67852 0 12359000 6302300 6056200 35407 1699 13422 13787 55341;55342 55342 TSSAETPTIPLGSAVEAIK 19 1 0 Unmodified _TSSAETPTIPLGSAVEAIK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 937.0053 2 936.501663 1870.98877 63553.78 0.55277 0.00051767 0.22838 0.00021388 0.78116 0.00073156 936.50186568627 940.508740807425 107.97 0.61405 107.97 107.65 108.27 7.6294E-06 311 45 10 0 0 0 3.0079E-05 2 67194 56.205 56.205 1 0.99895 1.1275 0 79399000 41201000 38198000 35408 1774;1029;1128 13423 13788 55343;55344 55344 TSSAETPTIPLGSAVEAIK 19 1 0 Unmodified _TSSAETPTIPLGSAVEAIK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 937.0055 2 936.501663 1870.98877 63234.51 0.80672 0.0007555 -0.085042 -7.9642E-05 0.72168 0.00067585 937.003219084109 940.50841811777 107.41 0.5425 107.41 107.16 107.71 -7.6294E-06 262 37 10 0 0 0 1.4573E-05 2 68432 79.633 79.633 1 1.0373 1.1593 0 97250000 49164000 48086000 35409 1774;1029;1128 13423 13788 55345;55346 55346 TSSAETPTIPLGSAVEAIK 19 1 0 Unmodified _TSSAETPTIPLGSAVEAIK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 940.5081 2 936.501663 1870.98877 63408.97 0.65691 0.00061519 -0.1566 -0.00014665 0.50031 0.00046854 937.002947924287 940.508668580902 119.21 0.4109 119.21 118.98 119.39 7.6294E-06 108 16 9 0 0 0 0.025485 1 69559 32.275 32.275 1 2.3487 1.891 0 22824000 5832200 16992000 35410 1774;1029;1128 13423 13788 55347 55347 TSSAQVEGGVHSLHSYEK 18 1 0 Unmodified _TSSAQVEGGVHSLHSYEK_ 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.6441 3 639.309666 1914.90717 75729.76 0.82364 0.00052656 -0.08565 -5.4757E-05 0.73799 0.0004718 639.309629902233 641.981131094816 31.034 0.39878 31.034 30.908 31.307 1.9073E-06 180 36 8 0 0 0 7.8537E-17 2 15267 114.96 109.42 1 1.2846 1.4184 0 56735000 23254000 33481000 35411 1282 13424 13789 55348;55349 55349 TSSAQVEGGVHSLHSYEK 18 1 0 Unmodified _TSSAQVEGGVHSLHSYEK_ 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3161 3 639.309666 1914.90717 75525.69 0.95723 0.00061196 -0.16784 -0.0001073 0.78939 0.00050466 639.308827642596 642.315681142158 29.675 0.4642 29.675 29.465 29.93 0 156 34 7 0 0 0 3.8516E-06 1 14338 78.088 78.088 1 1.2329 1.3652 0 46024000 20524000 25501000 35412 1282 13424 13789 55350 55350 TSSAQVEGGVHSLHSYEK 18 1 0 Unmodified _TSSAQVEGGVHSLHSYEK_ 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 962.4689 2 958.460861 1914.90717 NaN NaN NaN -0.688 -0.00065942 NaN NaN NaN NaN 29.708 0.11826 29.708 29.63 29.748 1.9073E-06 0 0 0 7.3288E-06 1 14394 70.622 58.262 1 NaN NaN 0 4665000 0 4665000 35413 1282 13424 13789 55351 55351 TSSAVWNSPPLQGAR 15 0 1 Unmodified _TSSAVWNSPPLQGAR_ 0 0 0 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.9056 2 785.902254 1569.78995 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.716 1 72.716 72.216 73.216 7.6294E-06 0 0 0 0.047673 1 43637 39.657 33.053 1 35414 2059 13425 13790 55352 55352 TSSDDESEEDEDDLLQR 17 0 1 Unmodified _TSSDDESEEDEDDLLQR_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 996.9067 2 991.900893 1981.78723 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.603 1 56.603 56.103 57.103 0 0 0 0 0.00032092 1 31896 72.29 68.969 1 35415 876 13426 13791 55353 55353 TSSDDESEEDEDDLLQR 17 0 1 Unmodified _TSSDDESEEDEDDLLQR_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 991.9024 2 991.900893 1981.78723 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.605 1 56.605 56.105 57.105 0 0 0 0 0.0070532 1 31898 61.375 59.864 1 35416 876 13426 13791 55354 55354 TSSDDESEEDEDDLLQR 17 0 1 Unmodified _TSSDDESEEDEDDLLQR_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 997.4083 2 991.900893 1981.78723 NaN NaN NaN 0.10932 0.00010844 NaN NaN NaN NaN 55.888 0.42464 55.888 55.744 56.169 -3.8147E-06 0 0 0 8.6785E-05 1 32041 70.412 69.165 1 NaN NaN 0 4719700 0 4719700 35417 876 13426 13791 55355 55355 TSSDNNVSVTNVSVAK 16 1 0 Unmodified _TSSDNNVSVTNVSVAK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.4131 2 811.405023 1620.79549 68800.33 0.8047 0.00065294 0.27826 0.00022578 1.083 0.00087872 811.405217285849 815.412328707084 48.219 0.36943 48.219 48.067 48.436 0 117 30 5 0 0 0 8.2547E-09 2 26230 107.99 100.35 1 0.62328 0.65551 0 15357000 10052000 5305700 35418 873 13427 13792 55356;55357 55357 TSSDNNVSVTNVSVAK 16 1 0 Unmodified _TSSDNNVSVTNVSVAK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.4119 2 811.405023 1620.79549 NaN NaN NaN 0.46109 0.00037413 NaN NaN NaN NaN 47.119 0.23092 47.119 47.021 47.252 0 0 0 0 1.4014E-12 1 26096 110.92 95.779 1 NaN NaN 0 6960300 0 6960300 35419 873 13427 13792 55358 55358 TSSDNNVSVTNVSVAK 16 1 0 Unmodified _TSSDNNVSVTNVSVAK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.4054 2 811.405023 1620.79549 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.053 1 47.053 46.553 47.553 0 0 0 0 0.0040067 1 26067 53.252 46.563 1 35420 873 13427 13792 55359 55359 TSSDNNVSVTNVSVAK 16 1 0 Unmodified _TSSDNNVSVTNVSVAK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.4073 2 811.405023 1620.79549 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.268 1 47.268 46.768 47.768 0 0 0 0 0.0036074 1 26225 53.754 43.749 1 35421 873 13427 13792 55360 55360 TSSDNNVSVTNVSVAK 16 1 0 Unmodified _TSSDNNVSVTNVSVAK_ 0 0 0 B2RAN0;P54132;H0YNU5;Q3B7X0;H0YLV8 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 815.4123 2 811.405023 1620.79549 67543.48 0.6307 0.00051175 0.17995 0.00014601 0.81065 0.00065776 811.405151437491 815.41225764656 55.862 0.49779 55.862 55.622 56.12 -3.8147E-06 128 32 6 0 0 0 0.025539 1 28093 25.982 25.982 1 1.9157 1.545 0 2795500 1007800 1787700 35422 873 13427 13792 55361 55361 TSSGDASSLSIEETNK 16 1 0 Unmodified _TSSGDASSLSIEETNK_ 0 0 0 O43290;E9PQI8 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 817.8867 2 813.378671 1624.74279 67859.48 1.2226 0.00099446 0.049602 4.0345E-05 1.2722 0.0010348 813.378723604246 817.385433832181 41.321 0.31961 41.321 41.128 41.448 0 95 26 6 0 0 0 1.1551E-05 2 21692 86.803 86.803 1 0.83909 0.85366 0 13997000 8287900 5709400 35423 1384 13428 13793 55362;55363 55363 TSSGDASSLSIEETNK 16 1 0 Unmodified _TSSGDASSLSIEETNK_ 0 0 0 O43290;E9PQI8 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.8824 2 813.378671 1624.74279 NaN NaN NaN 1.2538 0.0010198 NaN NaN NaN NaN 40.311 0.43347 40.311 40.134 40.568 -3.8147E-06 0 0 0 0.0002054 1 21434 71.548 49.802 1 NaN NaN 0 6927800 6927800 0 35424 1384 13428 13793 55364 55364 TSSGDASSLSIEETNK 16 1 0 Unmodified _TSSGDASSLSIEETNK_ 0 0 0 O43290;E9PQI8 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.3867 2 813.378671 1624.74279 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.23 1 40.23 39.73 40.73 0 0 0 0 0.0001418 1 21448 83.204 67.006 1 35425 1384 13428 13793 55365 55365 TSSLDPNDQVAMGR 14 0 1 Oxidation (M) _TSSLDPNDQVAM(ox)GR_ TSSLDPNDQVAM(1)GR TSSLDPNDQVAM(143.24)GR 0 1 0 Q9NY61;A0A087WWS8;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.8527 2 753.846287 1505.67802 67642.75 0.74317 0.00056024 0.7447 0.00056139 1.4879 0.0011216 753.847696496624 758.850744191299 34.18 0.81845 34.18 33.904 34.723 0 225 62 8 0 0 0 2.0454E-21 2 17406 143.24 135.84 1 0.92119 1.0703 0 59413000 30962000 28450000 35426 2080 13429 13794 55366;55367 55367 1916 TSSLDPNDQVAMGR 14 0 1 Oxidation (M) _TSSLDPNDQVAM(ox)GR_ TSSLDPNDQVAM(1)GR TSSLDPNDQVAM(69.79)GR 0 1 0 Q9NY61;A0A087WWS8;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.8459 2 753.846287 1505.67802 68844.09 0.31205 0.00023524 0.17232 0.0001299 0.48437 0.00036514 753.846285509302 758.850768934874 40.507 0.66271 40.507 40.313 40.976 3.8147E-06 296 52 9 0 0 0 9.5374E-05 3 18092 69.786 69.786 1 1.2653 1.0227 0 10706000 4991300 5714800 35427 2080 13429 13794 55368;55369;55370 55369 1916 TSSLDPNDQVAMGR 14 0 1 Unmodified _TSSLDPNDQVAMGR_ 0 0 0 Q9NY61;A0A087WWS8;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.356 2 745.848829 1489.68311 68903.03 0.60273 0.00044955 -0.25432 -0.00018969 0.34841 0.00025986 745.847903753131 750.85313141901 59.092 0.9855 59.092 58.465 59.45 0 251 75 6 0 0 0 0.0060177 2 30197 42.788 36.405 1 1.1007 0.92271 0 4085600 2040000 2045600 35428 2080 13429 13795 55371;55372 55372 TSSLDPNDQVAMGR 14 0 1 Unmodified _TSSLDPNDQVAMGR_ 0 0 0 Q9NY61;A0A087WWS8;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 750.8533 2 745.848829 1489.68311 71034.38 0.47268 0.00035255 0.010691 7.974E-06 0.48337 0.00036052 745.848732589252 750.853204564568 59.854 0.67542 59.854 59.446 60.122 0 200 49 7 0 0 0 0.00029791 1 29900 61.833 61.833 1 1.1654 0.98946 0 2988700 1153800 1834800 35429 2080 13429 13795 55373 55373 TSSQPGFLER 10 0 1 Unmodified _TSSQPGFLER_ 0 0 0 A0A024R2F9;Q9BTV4;A0A0S2Z5N2 A0A024R2F9 A0A024R2F9 TMEM43 Transmembrane protein 43 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.2873 2 561.28292 1120.55129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.237 1 43.237 42.737 43.737 0 0 0 0 0.018267 1 23440 54.539 32.794 1 35430 110 13430 13796 55374 55374 TSTSQAVFR 9 0 1 Unmodified _TSTSQAVFR_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;C9J7S3;C9JLC1 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.7603 2 498.759081 995.503609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.145 1 29.145 28.645 29.645 0 0 0 0 9.5747E-06 1 14036 110.81 64.437 1 35431 610 13431 13797 55375 55375 TSTSQAVFR 9 0 1 Unmodified _TSTSQAVFR_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;C9J7S3;C9JLC1 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.7639 2 498.759081 995.503609 89810.43 0.31914 0.00015917 0.71697 0.00035759 1.0361 0.00051677 498.758818913507 503.764170164825 28.412 0.36797 28.412 28.203 28.571 0 94 25 5 0 0 0 0.00059241 2 13570 97.093 84.9 1 0.92452 1.0048 0 28482000 13202000 15279000 35432 610 13431 13797 55376;55377 55377 TSTSQAVFR 9 0 1 Unmodified _TSTSQAVFR_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60;C9J7S3;C9JLC1 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.7592 2 498.759081 995.503609 88089.67 0.032698 1.6308E-05 0.26546 0.0001324 0.29816 0.00014871 498.758892777102 504.264971595968 32.855 0.31342 32.855 32.661 32.974 0 63 15 7 0 0 0 0.038591 1 14239 42.599 33.826 1 0.93066 0.7782 0 3712600 1709100 2003500 35433 610 13431 13797 55378 55378 TSTTGSILNLNLDR 14 0 1 Unmodified _TSTTGSILNLNLDR_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q5JV90;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.9029 2 752.901919 1503.78929 70183.24 0.73644 0.00055447 0.64388 0.00048478 1.3803 0.0010392 752.902296472304 757.906330030352 97.807 0.6545 97.807 97.458 98.113 0 199 53 6 0 0 0 0.00017471 1 59573 72.937 72.937 1 0.66114 0.68818 0 21107000 12435000 8671900 35434 422;1317 13432 13798 55379 55379 TSTTGSILNLNLDR 14 0 1 Unmodified _TSTTGSILNLNLDR_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q5JV90;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 757.9072 2 752.901919 1503.78929 68834.93 0.89093 0.00067079 0.28633 0.00021558 1.1773 0.00088636 752.902135895177 757.906015886976 110.94 0.5332 110.94 110.68 111.21 0 120 21 7 0 0 0 0.00015761 1 64198 75.479 75.479 1 1.7973 1.4701 0 13548000 5013300 8534400 35435 422;1317 13432 13798 55380 55380 TSTTGSILNLNLDR 14 0 1 Unmodified _TSTTGSILNLNLDR_ 0 0 0 A0A087WVZ6;A6H8Y8;A0A087WV57;Q5JV90;H7C4X9;A0A087WYS3;Q9ULU4 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.9069 2 752.901919 1503.78929 70889.38 0.67169 0.00050571 0.068269 5.14E-05 0.73995 0.00055711 752.902296911698 757.906259164125 110.79 0.62225 110.79 110.51 111.13 0 117 28 6 0 0 0 8.9628E-05 2 63114 87.001 87.001 1 1.7753 1.4486 0 9407600 3442600 5965100 35436 422;1317 13432 13798 55381;55382 55381 TSTTGVATTQSPTPR 15 0 1 Unmodified _TSTTGVATTQSPTPR_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 757.8904 2 752.883726 1503.7529 71220.72 0.44155 0.00033243 0.32926 0.0002479 0.77081 0.00058033 752.884332880481 757.888184307783 26.563 0.31799 26.563 26.42 26.738 0 60 17 6 0 0 0 2.0197E-07 2 11916 108.56 108.56 1 2.1683 2.1522 0 8357500 3527300 4830200 35437 640 13433 13799 55383;55384 55383 TSTTGVATTQSPTPR 15 0 1 Unmodified _TSTTGVATTQSPTPR_ 0 0 0 A0A1P7ZIM8;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMS6;B7Z8W3;A0A0A0MTE2;E9PMT2 A0A1P7ZIM8 A0A1P7ZIM8 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.8876 2 752.883726 1503.7529 70099.26 0.77446 0.00058308 0.0021999 1.6563E-06 0.77666 0.00058473 752.883674436456 757.888062166776 26.174 0.33578 26.174 26.002 26.338 0 43 16 5 0 0 0 1.6608E-05 2 11593 88.021 81.78 1 2.8176 2.8445 0 10213000 2674200 7538700 35438 640 13433 13799 55385;55386 55385 TSVCCVEDGVSHR 13 0 1 Unmodified _TSVCCVEDGVSHR_ 0 0 0 Q9H981;H0Y849 Q9H981 Q9H981 ACTR8 Actin-related protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.5544 3 502.553897 1504.63986 88072.37 0.64472 0.00032401 0.37409 0.000188 1.0188 0.00051201 502.554065119835 505.889968812589 27.227 0.25756 27.227 27.119 27.376 -1.9073E-06 38 11 6 0 0 0 0.026546 1 12558 23.456 23.456 1 0.64957 0.65744 0 7671700 4689900 2981800 35439 2044 13434 13800 55387 55387 TSVCCVEDGVSHR 13 0 1 Unmodified _TSVCCVEDGVSHR_ 0 0 0 Q9H981;H0Y849 Q9H981 Q9H981 ACTR8 Actin-related protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 506.2243 3 502.553897 1504.63986 87109.31 0.25091 0.0001261 -0.81076 -0.00040745 -0.55984 -0.00028135 502.553839317765 506.223884618991 31.655 0.36986 31.655 31.522 31.892 0 79 20 7 0 0 0 0.017496 1 12947 27.767 27.767 1 2.0398 1.8403 0 2077500 693820 1383700 35440 2044 13434 13800 55388 55388 TSVGQAAGGQSGLGPPASQNVNSHVK 26 1 0 Unmodified _TSVGQAAGGQSGLGPPASQNVNSHVK_ 0 0 0 Q5SY21;Q5SY20;B2R702;A8K291;P10074 Q5SY21 Q5SY21 ZBTB48 Zinc finger and BTB domain-containing protein 48 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.7449 3 816.745714 2447.21531 66768.43 0.99454 0.00081228 -0.13007 -0.00010624 0.86446 0.00070605 817.414578448305 819.750946513758 42.65 0.25634 42.65 42.536 42.792 0 65 21 5 0 0 0 0.00027245 4 23008 33.263 33.263 1 0.77372 0.79644 0 18057000 9733800 8323400 35441 709 13435 13801 55389;55390;55391;55392 55389 TSVLAAANPIESQWNPK 17 1 0 Unmodified _TSVLAAANPIESQWNPK_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 913.4766 2 913.475783 1824.93701 65883.38 0.49987 0.00045662 -0.082606 -7.5458E-05 0.41727 0.00038116 913.97740377316 917.984089722179 100.44 0.52111 100.44 100.25 100.77 -7.6294E-06 144 41 5 0 0 0 0.000155 1 61621 54.343 54.343 1 1.1417 1.1909 0 12242000 4682100 7559600 35442 235 13436 13802 55393 55393 TSVLAAANPIESQWNPK 17 1 0 Unmodified _TSVLAAANPIESQWNPK_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.9793 2 913.475783 1824.93701 66571.39 0.64159 0.00058608 -0.1729 -0.00015794 0.4687 0.00042814 913.977455041467 917.984134015822 99.743 0.37661 99.743 99.567 99.944 0 118 27 6 0 0 0 6.8814E-05 1 62583 71.176 71.176 1 1.1163 1.156 0 11329000 6066800 5261800 35443 235 13436 13802 55394 55394 TSVLAAANPIESQWNPK 17 1 0 Unmodified _TSVLAAANPIESQWNPK_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 913.9778 2 913.475783 1824.93701 64308.21 0.81223 0.00074195 -0.90335 -0.00082519 -0.091121 -8.3237E-05 913.976332491794 917.482929255189 112.98 0.30596 112.98 112.78 113.09 0 58 12 7 0 0 0 0.020331 1 65701 25.122 25.122 1 0.73754 0.57237 0 3465800 1770900 1694900 35444 235 13436 13802 55395 55395 TSVSQNVIPSSAQK 14 1 0 Unmodified _TSVSQNVIPSSAQK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.3837 2 723.383362 1444.75217 72952.06 0.70426 0.00050945 -0.019649 -1.4214E-05 0.68461 0.00049523 723.383568579202 727.390354658647 42.898 0.46417 42.898 42.641 43.105 0 185 37 6 0 0 0 6.0356E-21 1 23131 140.09 119.88 1 0.68692 0.75845 0 44321000 26547000 17774000 35445 1681 13437 13803 55396 55396 TSVSQNVIPSSAQK 14 1 0 Unmodified _TSVSQNVIPSSAQK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.3913 2 723.383362 1444.75217 71583.63 0.54464 0.00039399 0.20195 0.00014609 0.74659 0.00054007 723.383259411614 727.39081610739 50.713 0.74085 50.713 50.354 51.095 0 289 51 8 0 0 0 3.8786E-14 2 24821 125.46 116.14 1 1.322 1.0608 0 8121300 3487400 4633900 35446 1681 13437 13803 55397;55398 55398 TSVSQNVIPSSAQK 14 1 0 Unmodified _TSVSQNVIPSSAQK_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.3911 2 723.383362 1444.75217 71069.73 0.40478 0.00029281 0.1231 8.9046E-05 0.52788 0.00038186 723.383302255581 727.390719408251 51.122 0.70633 51.122 50.79 51.496 -3.8147E-06 270 43 8 0 0 0 1.1833E-58 2 24531 200.76 190.87 1 1.3237 1.0817 0 8175600 3538600 4637000 35447 1681 13437 13803 55399;55400 55400 TSVTDFLR 8 0 1 Unmodified _TSVTDFLR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.7509 2 469.750724 937.486896 88650.22 0.48359 0.00022717 0.12631 5.9335E-05 0.6099 0.0002865 469.750705697124 474.754852242534 84.781 1.2286 84.781 84.282 85.51 0 386 99 6 0 0 0 0.0080668 1 50724 80.229 52.122 1 1.0323 1.1775 0 120490000 58765000 61729000 35448 1898 13438 13804 55401 55401 TSVTDFLR 8 0 1 Unmodified _TSVTDFLR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.7552 2 469.750724 937.486896 88371.86 0.58529 0.00027494 0.28427 0.00013353 0.86955 0.00040847 469.750705882728 474.754951898017 83.91 0.856 83.91 83.401 84.257 0 293 69 6 0 0 0 0.020081 2 51234 58.716 42.205 1 1.0529 1.2064 0 172640000 81821000 90823000 35449 1898 13438 13804 55402;55403 55403 TSVTDFLR 8 0 1 Unmodified _TSVTDFLR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 469.7511 2 469.750724 937.486896 87845.64 0.5165 0.00024262 0.018863 8.8608E-06 0.53536 0.00025149 469.750619378621 474.75481323787 96.443 1.2011 96.443 96.025 97.226 0 248 68 5 0 0 0 0.049834 1 54024 43.808 25.772 1 1.1356 0.93261 0 17316000 7895100 9420400 35450 1898 13438 13804 55404 55404 TSVTDFLR 8 0 1 Unmodified _TSVTDFLR_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 469.7507 2 469.750724 937.486896 87849.51 0.16082 7.5544E-05 -0.10678 -5.016E-05 0.054038 2.5385E-05 469.750583378987 474.754745425351 96.435 1.0236 96.435 95.973 96.997 0 233 56 5 0 0 0 0.053151 1 53146 42.599 24.563 1 1.1788 0.97349 0 14544000 7276700 7267200 35451 1898 13438 13804 55405 55405 TSYAQLLEECPRDETSGLHLLPLPESAPALPTEEQVQR 38 0 2 Unmodified _TSYAQLLEECPRDETSGLHLLPLPESAPALPTEEQVQR_ 0 0 1 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1075.0403 4 1069.53641 4274.11652 58871.89 0.46337 0.00049559 -0.16178 -0.00017303 0.30159 0.00032256 1070.03812546829 1074.79154112158 132.16 0.33932 132.16 131.98 132.31 0 92 15 9 0 0 0 0.0021263 2 80267 22.934 22.934 1 3.0427 2.6042 0 6009200 1278200 4731000 35452 397;1622 13439 13805 55406;55407 55406 TSYEEFTHK 9 1 0 Unmodified _TSYEEFTHK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.2623 2 571.261653 1140.50875 80554.77 0.66169 0.000378 0.14577 8.3274E-05 0.80746 0.00046127 571.261867453245 575.268697830184 26.867 0.62382 26.867 26.672 27.295 0 137 36 6 0 0 0 1.5748E-09 2 12171 150.4 150.4 1 0.92151 0.99857 0 44153000 23330000 20822000 35453 1854 13440 13806 55408;55409 55408 TSYEEFTHK 9 1 0 Unmodified _TSYEEFTHK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.2689 2 571.261653 1140.50875 80170.75 0.53223 0.00030404 0.17652 0.00010084 0.70875 0.00040488 571.261473981209 575.268717782647 26.405 0.45028 26.405 26.157 26.607 0 124 25 7 0 0 0 1.4999E-05 1 11789 122.52 114.1 1 0.88609 1.0002 0 64969000 36388000 28580000 35454 1854 13440 13806 55410 55410 TSYEEFTHK 9 1 0 Unmodified _TSYEEFTHK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.2618 2 571.261653 1140.50875 80157.59 0.34759 0.00019856 -0.29876 -0.00017067 0.048826 2.7892E-05 571.261498283987 575.268392874731 30.612 0.4525 30.612 30.376 30.829 -1.9073E-06 132 30 6 0 0 0 0.01379 2 12744 56.258 56.258 1 0.88378 0.68719 0 3653000 1830000 1823000 35455 1854 13440 13806 55411;55412 55412 TSYEEFTHK 9 1 0 Unmodified _TSYEEFTHK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.2615 2 571.261653 1140.50875 78659.23 0.26905 0.0001537 -0.37563 -0.00021458 -0.10658 -6.0883E-05 571.261493595069 575.268041132965 30.751 0.73089 30.751 30.455 31.186 -1.9073E-06 119 39 6 0 0 0 0.008633 1 12333 60.91 60.91 1 0.92121 0.73493 0 3086400 1510800 1575600 35456 1854 13440 13806 55413 55413 TSYLTELIDR 10 0 1 Unmodified _TSYLTELIDR_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;Q96SR7;B4DMR0;H0Y630;B4DR80;Q6P0Y1;Q5U0E6;B4DT57;Q9Y6E0;Q6FG81;Q5JV99;Q5JV98 Q8NBY1 Q8NBY1 STK26;MST4;STK24;HEL-S-95 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 610.8233 2 605.819335 1209.62412 78191.54 0.86846 0.00052613 0.038676 2.343E-05 0.90714 0.00054956 605.81938386021 610.823387315862 100.89 0.89579 100.89 100.44 101.34 0 198 65 4 0 0 0 1.0181E-08 1 61968 123.86 107.08 1 1.6208 1.7186 0 41815000 14888000 26928000 35457 1065 13441 13807 55414 55414 TSYLTELIDR 10 0 1 Unmodified _TSYLTELIDR_ 0 0 0 Q8NBY1;B4E0Y9;Q9P289;Q9NWX4;Q499L9;Q96SR7;B4DMR0;H0Y630;B4DR80;Q6P0Y1;Q5U0E6;B4DT57;Q9Y6E0;Q6FG81;Q5JV99;Q5JV98 Q8NBY1 Q8NBY1 STK26;MST4;STK24;HEL-S-95 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.824 2 605.819335 1209.62412 79439.39 0.95917 0.00058108 0.48735 0.00029524 1.4465 0.00087633 605.819274083816 610.823587435883 113.6 0.61259 113.6 113.39 114 0 102 28 5 0 0 0 0.054537 1 66191 35.652 28.006 1 1.2418 1.0646 0 2726500 1436800 1289800 35458 1065 13441 13807 55415 55415 TSYMAQLMK 9 1 0 2 Oxidation (M) _TSYM(ox)AQLM(ox)K_ TSYM(1)AQLM(1)K TSYM(77.92)AQLM(77.92)K 0 2 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.7648 2 552.756835 1103.49912 NaN NaN NaN -0.8898 -0.00049184 NaN NaN NaN NaN 26.999 0.55168 26.999 26.806 27.357 -1.9073E-06 0 0 0 0.00070037 1 12269 77.923 62.261 1 NaN NaN 0 15557000 0 15557000 35459 1570 13442 13808 55416 55416 1348;1349 TSYMAQLMK 9 1 0 2 Oxidation (M) _TSYM(ox)AQLM(ox)K_ TSYM(1)AQLM(1)K TSYM(58.82)AQLM(58.82)K 0 2 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 552.7567 2 552.756835 1103.49912 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.962 1 26.962 26.462 27.462 0 0 0 0 0.01205 1 12259 58.815 44.812 1 35460 1570 13442 13808 55417 55417 1348;1349 TSYMAQLMK 9 1 0 2 Oxidation (M) _TSYM(ox)AQLM(ox)K_ TSYM(1)AQLM(1)K TSYM(66.07)AQLM(66.07)K 0 2 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.7567 2 552.756835 1103.49912 80051.07 0.71582 0.00039567 -0.77607 -0.00042898 -0.06025 -3.3304E-05 552.756711657413 556.763600177259 26.59 0.57546 26.59 26.418 26.994 0 148 28 7 0 0 0 0.0068013 1 11957 66.073 59.97 1 2.4674 2.7844 0 64202000 12657000 51545000 35461 1570 13442 13808 55418 55418 1348;1349 TTAAHGLELR 10 0 1 Unmodified _TTAAHGLELR_ 0 0 0 B4DY32;P08243 B4DY32 B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 360.2009 3 356.864729 1067.57236 NaN NaN NaN -0.30913 -0.00011032 NaN NaN NaN NaN 28.047 0.34611 28.047 27.889 28.235 1.9073E-06 0 0 0 0.016082 1 13299 45.879 25.889 1 NaN NaN 0 13276000 0 13276000 35462 1051 13443 13809 55419 55419 TTAATLMNAYSSR 13 0 1 Oxidation (M) _TTAATLM(ox)NAYSSR_ TTAATLM(1)NAYSSR TTAATLM(45.88)NAYSSR 0 1 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.8405 2 701.835191 1401.65583 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.966 1 40.966 40.466 41.466 0 0 0 0 0.010334 1 21504 45.879 36.083 1 35463 1602 13444 13810 55420 55420 1387 TTAENEFVMLK 11 1 0 Oxidation (M) _TTAENEFVM(ox)LK_ TTAENEFVM(1)LK TTAENEFVM(131.62)LK 0 1 0 CON__P13647;P13647;B4E1T1;B4DL32;F8W0C6;H0YIN9 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.8192 2 649.818478 1297.6224 NaN NaN NaN 0.42648 0.00027713 NaN NaN NaN NaN 67.032 0.77351 67.032 66.545 67.319 0 0 0 0 1.8517E-16 1 39564 131.62 121.09 1 NaN NaN 0 24731000 24731000 0 + 35464 1162 13445 13811 55421 55421 874 TTALDQLSEK 10 1 0 Unmodified _TTALDQLSEK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.2919 2 553.290411 1104.56627 81463.37 0.67365 0.00037272 0.88275 0.00048842 1.5564 0.00086114 553.792881316373 557.297901014074 46.435 0.52944 46.435 46.134 46.663 -3.8147E-06 113 39 4 0 0 0 0.00095338 1 25643 78.556 64.042 1 0.98484 1.0451 0 23426000 11116000 12310000 35465 1581 13446 13812 55422 55422 TTANLAALK 9 1 0 Unmodified _TTANLAALK_ 0 0 0 Q6ZMY0;Q9H6S0 Q6ZMY0 Q6ZMY0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 910.5444 1 902.530558 901.523281 63546.15 0.49781 0.00044929 0.09046 8.1643E-05 0.58827 0.00053093 902.530537043461 910.54473400008 64.78 1.4421 64.78 64.368 65.81 7.6294E-06 510 123 8 0 0 0 0.00037129 1 37943 107.29 67.649 1 0.96435 1.1149 0 199890000 103590000 96292000 35466 1863 13447 13813 55423 55423 TTCSCSLAVQLSK 13 1 0 Unmodified _TTCSCSLAVQLSK_ 0 0 0 A0A087WXS7;O43681;K7ERW9 A0A087WXS7 A0A087WXS7 ASNA1 ATPase ASNA1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.86 2 727.852526 1453.6905 NaN NaN NaN 0.25951 0.00018888 NaN NaN NaN NaN 59.862 0.18187 59.862 59.736 59.918 0 0 0 0 0.0012044 1 34149 77.062 66.691 1 NaN NaN 0 4232200 0 4232200 35467 431 13448 13814 55424 55424 TTDDTTTDNYIAQGK 15 1 0 Unmodified _TTDDTTTDNYIAQGK_ 0 0 0 B4DXX1;B2R713;Q7Z2T5 B4DXX1 B4DXX1 TRMT1L TRMT1-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.3795 2 822.373389 1642.73222 67441.31 0.59229 0.00048708 -0.1125 -9.252E-05 0.47979 0.00039456 822.373439278315 826.380385842189 35.277 0.32074 35.277 35.092 35.412 0 68 28 4 0 0 0 3.421E-11 3 17675 124.42 124.42 1 0.84413 0.85594 0 5931300 3437500 2493900 35468 846 13449 13815 55425;55426;55427 55425 TTDDTTTDNYIAQGK 15 1 0 Unmodified _TTDDTTTDNYIAQGK_ 0 0 0 B4DXX1;B2R713;Q7Z2T5 B4DXX1 B4DXX1 TRMT1L TRMT1-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.374 2 822.373389 1642.73222 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.568 1 34.568 34.068 35.068 0 0 0 0 0.0013058 1 17517 60.255 50.302 1 35469 846 13449 13815 55428 55428 TTDGSLQIR 9 0 1 Unmodified _TTDGSLQIR_ 0 0 0 X5DQX7;Q06787;W5ZQ92;Q59GC1;B4DFH8 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.7648 2 495.764363 989.514173 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.29 1 33.29 32.79 33.79 0 0 0 0 0.0033771 1 16655 71.379 26.687 1 35470 1689 13450 13816 55429 55429 TTDGVYEGVAIGGDR 15 0 1 Unmodified _TTDGVYEGVAIGGDR_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;Q8N9C4 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.3679 2 755.362627 1508.7107 NaN NaN NaN -0.030722 -2.3206E-05 NaN NaN NaN NaN 65.484 0.32152 65.484 65.416 65.738 0 0 0 0 0.017335 1 37842 44.616 37.763 1 NaN NaN 0 4506100 0 4506100 35471 89 13451 13817 55430 55430 TTDGVYEGVAIGGDR 15 0 1 Unmodified _TTDGVYEGVAIGGDR_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396;Q8N9C4 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.3676 2 755.362627 1508.7107 NaN NaN NaN 0.31749 0.00023982 NaN NaN NaN NaN 64.61 0.53551 64.61 64.262 64.798 0 0 0 0 0.0016312 1 38007 65.234 54.404 1 NaN NaN 0 3424400 0 3424400 35472 89 13451 13817 55431 55431 TTDGYLLR 8 0 1 Unmodified _TTDGYLLR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;H0Y9Y4;D6RED7;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.751 2 469.750724 937.486896 86208.4 0.10929 5.1339E-05 -0.021674 -1.0181E-05 0.087616 4.1158E-05 469.750749633619 474.75471685727 50.195 1.2542 50.195 49.649 50.904 0 571 113 9 0 0 0 0.0046927 2 27448 92.822 92.822 1 0.82603 0.97917 0 536640000 308160000 228480000 35473 742 13452 13818 55432;55433 55432 TTDGYLLR 8 0 1 Unmodified _TTDGYLLR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;H0Y9Y4;D6RED7;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.7505 2 469.750724 937.486896 86690 0.12617 5.9269E-05 0.25653 0.00012051 0.38271 0.00017978 469.75079757982 474.755048869275 48.857 1.1249 48.857 48.491 49.616 -3.8147E-06 431 92 9 0 0 0 0.00095293 2 27252 124.37 94.997 1 0.82351 0.96454 0 697250000 358730000 338520000 35474 742 13452 13818 55434;55435 55434 TTDGYLLR 8 0 1 Unmodified _TTDGYLLR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;H0Y9Y4;D6RED7;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 474.7552 2 469.750724 937.486896 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.922 1 56.922 56.422 57.422 3.8147E-06 0 0 0 0.044084 1 28779 56.547 31.624 1 35475 742 13452 13818 55436 55436 TTDGYLLR 8 0 1 Unmodified _TTDGYLLR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;H0Y9Y4;D6RED7;D6R9B6 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 474.7546 2 469.750724 937.486896 87201.53 0.33841 0.00015897 -0.31367 -0.00014735 0.02474 1.1621E-05 469.750611081853 474.754509681153 57.657 1.7865 57.657 57.032 58.818 -3.8147E-06 619 127 8 0 0 0 0.0068997 2 28462 85.265 65.629 1 0.81521 0.71108 0 36774000 20869000 15905000 35476 742 13452 13818 55437;55438 55438 TTEEQVQASTPCPR 14 0 1 Unmodified _TTEEQVQASTPCPR_ 0 0 0 Q14137;B2RDN4;A8K3R2 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 802.3743 2 802.372669 1602.73078 68073.36 1.2817 0.0010284 -0.36662 -0.00029416 0.91512 0.00073427 802.372591832332 807.87722084278 29.808 0.61926 29.808 29.558 30.177 0 193 48 7 0 0 0 2.9106E-15 2 14393 137.01 132.65 1 0.61075 0.65718 0 25734000 12631000 13102000 35477 1726 13453 13819 55439;55440 55440 TTEEQVQASTPCPR 14 0 1 Unmodified _TTEEQVQASTPCPR_ 0 0 0 Q14137;B2RDN4;A8K3R2 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.3785 2 802.372669 1602.73078 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.604 1 29.604 29.104 30.104 1.9073E-06 0 0 0 8.6198E-07 1 14314 103.43 90.08 1 35478 1726 13453 13819 55441 55441 TTEEQVQASTPCPR 14 0 1 Unmodified _TTEEQVQASTPCPR_ 0 0 0 Q14137;B2RDN4;A8K3R2 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.8781 2 802.372669 1602.73078 67807.22 0.42129 0.00033803 -0.2883 -0.00023132 0.13299 0.00010671 802.372835547431 807.376870343493 35.45 1.1212 35.45 35.067 36.188 0 456 94 8 0 0 0 0.0037659 2 15649 46.592 46.592 1 1.2134 1.0037 0 19634000 7935700 11698000 35479 1726 13453 13819 55442;55443 55443 TTEEQVQASTPCPR 14 0 1 Unmodified _TTEEQVQASTPCPR_ 0 0 0 Q14137;B2RDN4;A8K3R2 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 807.3776 2 802.372669 1602.73078 67396.79 0.58659 0.00047066 -0.51767 -0.00041537 0.06892 5.53E-05 802.372644998282 807.376777071948 35.709 0.90133 35.709 35.378 36.279 0 415 76 9 0 0 0 0.00061476 2 15345 59.57 59.57 1 1.2182 1.0298 0 18074000 8298400 9775600 35480 1726 13453 13819 55444;55445 55444 TTEMETIYDLGTK 13 1 0 Oxidation (M) _TTEM(ox)ETIYDLGTK_ TTEM(1)ETIYDLGTK TTEM(91.31)ETIYDLGTK 0 1 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30;X6R2L4 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.3555 2 759.355622 1516.69669 NaN NaN NaN -0.38664 -0.0002936 NaN NaN NaN NaN 68.239 0.5975 68.239 68.014 68.612 0 0 0 0 3.2494E-05 1 39413 91.313 84.46 1 NaN NaN 0 14238000 14238000 0 35481 2120 13454 13820 55446 55446 1947 TTEMETIYDLGTK 13 1 0 Oxidation (M) _TTEM(ox)ETIYDLGTK_ TTEM(1)ETIYDLGTK TTEM(115.18)ETIYDLGTK 0 1 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30;X6R2L4 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.3625 2 759.355622 1516.69669 68713.62 0.51174 0.00038859 -0.12496 -9.4891E-05 0.38677 0.0002937 759.355197899482 763.362576560091 67.085 0.68813 67.085 66.772 67.46 0 266 57 7 0 0 0 4.8037E-09 2 39617 115.18 100.48 1 1.1079 1.1858 0 37007000 20198000 16809000 35482 2120 13454 13820 55447;55448 55448 1947 TTEMETIYDLGTK 13 1 0 Oxidation (M) _TTEM(ox)ETIYDLGTK_ TTEM(1)ETIYDLGTK TTEM(84.51)ETIYDLGTK 0 1 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30;X6R2L4 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 763.8637 2 759.355622 1516.69669 70427.46 0.55546 0.00042179 -0.24699 -0.00018755 0.30847 0.00023424 759.355161445982 763.363005837523 78.326 0.6722 78.326 77.961 78.633 0 231 44 8 0 0 0 7.281E-05 1 41942 84.507 80.744 1 0.78356 0.61992 0 4163600 2430600 1733000 35483 2120 13454 13820 55449 55449 1947 TTEMETIYDLGTK 13 1 0 Unmodified _TTEMETIYDLGTK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30;X6R2L4 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 751.3582 2 751.358164 1500.70178 71243.71 0.41826 0.00031427 -0.038857 -2.9195E-05 0.37941 0.00028507 751.859700724685 755.364848091709 100.93 0.60143 100.93 100.72 101.32 0 123 39 5 0 0 0 0.025793 1 56336 34.501 30.614 1 1.2768 0.99493 0 2123800 967290 1156500 35484 2120 13454 13821 55450 55450 TTEPGVTGLLLAVEGPAAK 19 1 0 Unmodified _TTEPGVTGLLLAVEGPAAK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 912.5101 2 912.509291 1823.00403 63808.72 0.53476 0.00048797 0.021709 1.9809E-05 0.55647 0.00050778 912.509265083916 916.516399673232 121.11 0.91633 121.11 120.79 121.7 0 326 60 10 0 0 0 4.7591E-08 2 78103 90.707 90.707 1 1.0578 1.1954 0 105850000 51530000 54325000 35485 1741 13455 13822 55451;55452 55451 TTEPGVTGLLLAVEGPAAK 19 1 0 Unmodified _TTEPGVTGLLLAVEGPAAK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.5168 2 912.509291 1823.00403 64043.83 0.86497 0.00078929 0.024762 2.2596E-05 0.88973 0.00081189 913.010664063151 916.516396729562 120.66 0.80009 120.66 120.37 121.17 0 342 52 10 0 0 0 3.5344E-06 2 79631 82.483 82.483 1 1.0776 1.2144 0 124220000 57359000 66858000 35486 1741 13455 13822 55453;55454 55454 TTEPGVTGLLLAVEGPAAK 19 1 0 Unmodified _TTEPGVTGLLLAVEGPAAK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 912.5102 2 912.509291 1823.00403 63997.72 0.8884 0.00081067 -0.46625 -0.00042546 0.42215 0.00038521 912.508924209358 916.515883851657 134.01 0.65602 134.01 133.67 134.33 0 174 28 11 0 0 0 9.6587E-06 2 81635 73.91 73.91 1 1.3472 1.1565 0 82054000 33782000 48273000 35487 1741 13455 13822 55455;55456 55456 TTEPGVTGLLLAVEGPAAK 19 1 0 Unmodified _TTEPGVTGLLLAVEGPAAK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 912.5103 2 912.509291 1823.00403 64067.61 1.0187 0.00092961 0.1206 0.00011005 1.1393 0.0010397 913.011039583142 916.516413577094 133.81 0.5833 133.81 133.5 134.09 0 210 26 12 0 0 0 2.8028E-08 1 80550 94.551 94.551 1 1.3881 1.1766 0 63908000 27009000 36899000 35488 1741 13455 13822 55457 55457 TTESHMDWEK 10 1 0 Oxidation (M) _TTESHM(ox)DWEK_ TTESHM(1)DWEK TTESHM(86.18)DWEK 0 1 0 E9PKP7;P17480;A8K962;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.2667 2 640.26661 1278.51867 76189.09 0.5186 0.00033204 0.23154 0.00014825 0.75014 0.00048029 640.266758184347 644.273950595262 17.476 0.44257 17.476 17.307 17.749 0 78 16 6 0 0 0 0.00023278 2 4606 86.18 69.41 1 0.65067 0.67459 0 11276000 6904200 4371800 35489 1244 13456 13823 55458;55459 55458 953 TTESHMDWEK 10 1 0 Unmodified _TTESHMDWEK_ 0 0 0 E9PKP7;P17480;A8K962;Q05BZ1;Q9BQR2;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.2767 2 632.269152 1262.52375 76232.57 0.2902 0.00018349 0.087117 5.5081E-05 0.37732 0.00023857 632.269230778809 636.276305158752 27.583 0.52311 27.583 27.304 27.828 0 66 20 6 0 0 0 0.00041361 1 10248 87.258 78.044 1 1.4527 1.2048 0 1782800 747150 1035700 35490 1244 13456 13824 55460 55460 TTEVTGTGLGR 11 0 1 Unmodified _TTEVTGTGLGR_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.2912 2 546.288202 1090.56185 81561.66 0.50358 0.0002751 -0.56059 -0.00030624 -0.057007 -3.1142E-05 546.287791619712 551.292130080049 30.561 0.61285 30.561 30.345 30.958 0 200 54 5 0 0 0 8.8355E-13 2 14843 146.69 113.8 1 1.107 1.1484 0 37739000 20135000 17604000 35491 1945 13457 13825 55461;55462 55462 TTEVTGTGLGR 11 0 1 Unmodified _TTEVTGTGLGR_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.2925 2 546.288202 1090.56185 82048.35 0.66838 0.00036513 0.012338 6.74E-06 0.68072 0.00037187 546.288059287 551.292269211791 29.993 0.69362 29.993 29.774 30.468 0 202 54 5 0 0 0 8.4152E-17 2 14529 155.84 123.52 1 1.1859 1.3456 0 48445000 22175000 26270000 35492 1945 13457 13825 55463;55464 55463 TTEVTGTGLGR 11 0 1 Unmodified _TTEVTGTGLGR_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.2924 2 546.288202 1090.56185 82080.51 0.64698 0.00035344 -0.30612 -0.00016723 0.34085 0.0001862 546.287954540313 551.292149705339 34.799 0.88583 34.799 34.513 35.399 0 247 74 5 0 0 0 3.3407E-05 2 14868 100.02 67.125 1 1.8023 1.4782 0 8820700 3246800 5573900 35493 1945 13457 13825 55465;55466 55465 TTGFGMIYDSLDYAK 15 1 0 Oxidation (M) _TTGFGM(ox)IYDSLDYAK_ TTGFGM(1)IYDSLDYAK TTGFGM(128.08)IYDSLDYAK 0 1 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.8924 2 849.389996 1696.76544 65120.77 0.85584 0.00072694 -0.095146 -8.0816E-05 0.76069 0.00064613 849.390040707335 853.39709837829 103.14 1.2705 103.14 102.59 103.86 0 796 106 10 0 0 0 2.0526E-15 4 63795 128.08 106.52 1 1.1704 1.3805 0 345520000 161110000 184400000 35494 413 13458 13826 55467;55468;55469;55470 55470 298 TTGFGMIYDSLDYAK 15 1 0 Oxidation (M) _TTGFGM(ox)IYDSLDYAK_ TTGFGM(1)IYDSLDYAK TTGFGM(116.24)IYDSLDYAK 0 1 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 853.3977 2 849.389996 1696.76544 65382.47 1.1055 0.000939 -0.42177 -0.00035825 0.68373 0.00058075 849.389743463818 853.396812951831 102.42 1.2021 102.42 101.92 103.13 7.6294E-06 719 93 10 0 0 0 1.6872E-10 4 64912 116.24 110.74 1 1.1932 1.3953 0 292120000 133790000 158330000 35495 413 13458 13826 55471;55472;55473;55474 55473 298 TTGFGMIYDSLDYAK 15 1 0 Oxidation (M) _TTGFGM(ox)IYDSLDYAK_ TTGFGM(1)IYDSLDYAK TTGFGM(99.5)IYDSLDYAK 0 1 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.3907 2 849.389996 1696.76544 65270.78 0.931 0.00079079 -0.59265 -0.00050339 0.33835 0.00028739 849.389697030071 853.396725476397 115.1 1.5371 115.1 114.73 116.27 7.6294E-06 446 70 12 0 0 0 6.5818E-07 2 67192 99.5 86.733 1 0.48944 0.4249 0 133720000 89374000 44347000 35496 413 13458 13826 55475;55476 55476 298 TTGFGMIYDSLDYAK 15 1 0 Oxidation (M) _TTGFGM(ox)IYDSLDYAK_ TTGFGM(1)IYDSLDYAK TTGFGM(51.22)IYDSLDYAK 0 1 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.3903 2 849.389996 1696.76544 66046.44 0.83201 0.0007067 -0.20462 -0.0001738 0.62738 0.00053289 849.389948255231 853.396899700351 124.57 0.68359 124.57 124.29 124.97 7.6294E-06 185 29 10 0 0 0 0.00035425 1 74637 51.218 29.02 1 0.99219 0.76917 0 13701000 6655900 7045300 35497 413 13458 13826 55477 55477 298 TTGFGMIYDSLDYAK 15 1 0 Oxidation (M) _TTGFGM(ox)IYDSLDYAK_ TTGFGM(1)IYDSLDYAK TTGFGM(100.04)IYDSLDYAK 0 1 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 849.8923 2 849.389996 1696.76544 65581.63 0.742 0.00063025 -0.41315 -0.00035093 0.32885 0.00027932 849.389888460871 853.396799945773 115 1.2774 115 114.62 115.9 -7.6294E-06 429 60 12 0 0 0 3.125E-07 2 66228 100.04 98.105 1 0.48826 0.41871 0 134590000 90506000 44083000 35498 413 13458 13826 55478;55479 55479 298 TTGFGMIYDSLDYAK 15 1 0 Unmodified _TTGFGMIYDSLDYAK_ 0 0 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.8954 2 841.392538 1680.77052 NaN NaN NaN -0.21783 -0.00018328 NaN NaN NaN NaN 113.36 0.58331 113.36 113.05 113.64 0 0 0 0 0.00030643 1 71638 75.479 68.35 1 NaN NaN 0 12456000 12456000 0 35499 413 13458 13827 55480 55480 TTGFGMIYDSLDYAK 15 1 0 Unmodified _TTGFGMIYDSLDYAK_ 0 0 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 841.393 2 841.392538 1680.77052 65807.97 0.74433 0.00062628 -0.06889 -5.7964E-05 0.67544 0.00056831 841.392761802701 845.399708003331 124.57 1.2776 124.57 124.19 125.46 0 395 53 12 0 0 0 5.0188E-06 2 74553 96.745 90.773 1 1.0303 0.88906 0 102970000 50521000 52445000 35500 413 13458 13827 55481;55482 55482 TTGFGMIYDSLDYAK 15 1 0 Unmodified _TTGFGMIYDSLDYAK_ 0 0 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.4001 2 841.392538 1680.77052 65939.45 0.72566 0.00061057 -0.16188 -0.0001362 0.56378 0.00047436 841.392545290069 845.399623184071 124.43 1.2539 124.43 124.08 125.33 -7.6294E-06 400 55 12 0 0 0 1.1435E-05 2 73494 91.914 89.294 1 0.99688 0.85096 0 100390000 50869000 49521000 35501 413 13458 13827 55483;55484 55483 TTGIVETHFTFK 12 1 0 Unmodified _TTGIVETHFTFK_ 0 0 0 P08754;A0A142CHG9;P63096;P04899;Q93020;B3KP24;B3KX51;B3KP89;Q96C71;P09471;H3BTM2;C9JPP4;Q8N6I9 P08754 P08754 GNAI3;GNAI1;GNAI2;WUGSC:H_LUCA16.1;GNAO1 Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.5812 3 460.910115 1379.70852 96903.16 0.22884 0.00010547 -0.5273 -0.00024304 -0.29846 -0.00013756 461.243965239798 463.581333323555 73.011 0.40704 73.011 72.723 73.13 0 65 32 4 0 0 0 0.027604 1 42794 26.13 21.697 1 1.0113 1.0408 0 10770000 4929600 5840100 35502 1458 13459 13828 55485 55485 TTGIVETHFTFK 12 1 0 Unmodified _TTGIVETHFTFK_ 0 0 0 P08754;A0A142CHG9;P63096;P04899;Q93020;B3KP24;B3KX51;B3KP89;Q96C71;P09471;H3BTM2;C9JPP4;Q8N6I9 P08754 P08754 GNAI3;GNAI1;GNAI2;WUGSC:H_LUCA16.1;GNAO1 Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.8699 2 690.861534 1379.70852 NaN NaN NaN 0.84199 0.0005817 NaN NaN NaN NaN 73.076 0.25946 73.076 72.88 73.139 0 0 0 0 0.0014978 2 42823 77.379 64.026 1 NaN NaN 0 6538300 0 6538300 35503 1458 13459 13828 55486;55487 55486 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Oxidation (M) _TTGIVM(ox)DSGDGVTHTVPIYEGYALPHAILR_ TTGIVM(1)DSGDGVTHTVPIYEGYALPHAILR TTGIVM(104.14)DSGDGVTHTVPIYEGYALPHAILR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.412 4 800.657764 3198.60195 66801.49 0.81858 0.0006554 -0.27465 -0.0002199 0.54393 0.0004355 801.15923264329 803.660876910964 109.53 2.2256 109.53 108.94 111.17 0 1275 156 16 0 0 0 2.707E-28 3 68296 104.14 104.14 1 2.232 2.652 0 1031600000 306810000 724840000 35504 1624;1656;1796 13460 13829 55488;55489;55490 55488 1411 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Oxidation (M) _TTGIVM(ox)DSGDGVTHTVPIYEGYALPHAILR_ TTGIVM(1)DSGDGVTHTVPIYEGYALPHAILR TTGIVM(63.9)DSGDGVTHTVPIYEGYALPHAILR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1070.879 3 1067.20793 3198.60195 58279.47 0.36723 0.00039191 -0.083409 -8.9015E-05 0.28382 0.00030289 1067.54212926628 1070.87827043465 109.57 1.2404 109.57 109.03 110.27 7.6294E-06 849 87 13 0 0 0 1.6167E-16 1 68912 63.901 63.901 1 2.2715 2.6856 0 258580000 75778000 182800000 35505 1624;1656;1796 13460 13829 55491 55491 1411 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Oxidation (M) _TTGIVM(ox)DSGDGVTHTVPIYEGYALPHAILR_ TTGIVM(1)DSGDGVTHTVPIYEGYALPHAILR TTGIVM(72.43)DSGDGVTHTVPIYEGYALPHAILR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.9092 4 800.657764 3198.60195 67086.59 0.76879 0.00061554 -0.32599 -0.00026101 0.4428 0.00035453 800.908793847173 803.660773660187 108.8 1.4454 108.8 108.23 109.67 7.6294E-06 1027 101 17 0 0 0 3.6128E-17 3 69414 72.425 72.425 1 2.2212 2.6244 0 1412000000 426710000 985330000 35506 1624;1656;1796 13460 13829 55492;55493;55494 55493 1411 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Oxidation (M) _TTGIVM(ox)DSGDGVTHTVPIYEGYALPHAILR_ TTGIVM(1)DSGDGVTHTVPIYEGYALPHAILR TTGIVM(88.57)DSGDGVTHTVPIYEGYALPHAILR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1070.8811 3 1067.20793 3198.60195 58690.91 0.40048 0.00042739 -0.18254 -0.00019481 0.21794 0.00023259 1067.87639689627 1070.87812584681 108.8 1.0839 108.8 108.29 109.37 0 691 75 15 0 0 0 4.8132E-23 2 69370 88.571 88.571 1 2.2138 2.5802 0 468990000 144020000 324970000 35507 1624;1656;1796 13460 13829 55495;55496 55495 1411 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Oxidation (M) _TTGIVM(ox)DSGDGVTHTVPIYEGYALPHAILR_ TTGIVM(1)DSGDGVTHTVPIYEGYALPHAILR TTGIVM(109.97)DSGDGVTHTVPIYEGYALPHAILR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.6617 4 800.657764 3198.60195 67086.58 0.8978 0.00071883 -0.47431 -0.00037976 0.42349 0.00033907 800.907690323372 803.410057886457 109.79 0.97153 109.79 109.37 110.35 7.6294E-06 282 63 9 0 0 0 8.6043E-29 2 70725 109.97 109.97 1 1.6972 1.9192 0 47539000 15165000 32374000 35508 1624;1656;1796 13460 13829 55497;55498 55498 1411 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Oxidation (M) _TTGIVM(ox)DSGDGVTHTVPIYEGYALPHAILR_ TTGIVM(1)DSGDGVTHTVPIYEGYALPHAILR TTGIVM(99.61)DSGDGVTHTVPIYEGYALPHAILR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.6619 4 800.657764 3198.60195 66213.18 0.91013 0.0007287 -0.25782 -0.00020643 0.65231 0.00052227 800.909151298837 803.410453305235 119.24 1.0643 119.24 118.97 120.04 -7.6294E-06 509 47 17 0 0 0 1.9012E-24 3 70457 99.614 99.614 1 1.7657 1.5476 0 1008200000 354670000 653540000 35509 1624;1656;1796 13460 13829 55499;55500;55501 55499 1411 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Oxidation (M) _TTGIVM(ox)DSGDGVTHTVPIYEGYALPHAILR_ TTGIVM(1)DSGDGVTHTVPIYEGYALPHAILR TTGIVM(81.53)DSGDGVTHTVPIYEGYALPHAILR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1067.5422 3 1067.20793 3198.60195 58040.06 0.4518 0.00048217 -0.17319 -0.00018483 0.27861 0.00029734 1067.87644196208 1070.87835352215 119.24 0.81161 119.24 119.04 119.85 -7.6294E-06 266 36 15 0 0 0 5.2363E-20 2 70535 81.534 81.534 1 1.667 1.4434 0 141650000 50303000 91351000 35510 1624;1656;1796 13460 13829 55502;55503 55503 1411 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Oxidation (M) _TTGIVM(ox)DSGDGVTHTVPIYEGYALPHAILR_ TTGIVM(1)DSGDGVTHTVPIYEGYALPHAILR TTGIVM(134.97)DSGDGVTHTVPIYEGYALPHAILR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.4122 4 800.657764 3198.60195 66340.66 0.73234 0.00058635 -0.16686 -0.0001336 0.56548 0.00045275 800.909264862396 803.410640474599 119.02 1.0452 119.02 118.7 119.74 0 490 46 17 0 0 0 9.5359E-45 2 69367 134.97 134.97 1 1.6648 1.4559 0 912570000 344400000 568170000 35511 1624;1656;1796 13460 13829 55504;55505 55504 1411 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Oxidation (M) _TTGIVM(ox)DSGDGVTHTVPIYEGYALPHAILR_ TTGIVM(1)DSGDGVTHTVPIYEGYALPHAILR TTGIVM(139.67)DSGDGVTHTVPIYEGYALPHAILR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1067.5425 3 1067.20793 3198.60195 58196.1 0.25366 0.00027071 -0.14637 -0.00015621 0.10729 0.0001145 1067.54216599025 1070.87819735773 119.02 0.84857 119.02 118.79 119.64 0 245 36 15 0 0 0 5.3221E-55 2 69468 139.67 139.67 1 1.7296 1.5106 0 192360000 72095000 120260000 35512 1624;1656;1796 13460 13829 55506;55507 55507 1411 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Oxidation (M) _TTGIVM(ox)DSGDGVTHTVPIYEGYALPHAILR_ TTGIVM(1)DSGDGVTHTVPIYEGYALPHAILR TTGIVM(40.67)DSGDGVTHTVPIYEGYALPHAILR 0 1 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.6624 4 800.657764 3198.60195 67009.48 0.77165 0.00061783 -0.22492 -0.00018009 0.54673 0.00043774 801.159164205463 803.410025414252 120.4 0.98715 120.4 119.94 120.93 0 283 49 10 0 0 0 3.2212E-07 1 70551 40.668 40.668 1 1.7978 1.4556 0 11744000 3752400 7991600 35513 1624;1656;1796 13460 13829 55508 55508 1411 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Unmodified _TTGIVMDSGDGVTHTVPIYEGYALPHAILR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1062.2095 3 1061.87629 3182.60703 59901.73 0.91492 0.00097153 -0.66024 -0.0007011 0.25467 0.00027043 1062.20920989112 1065.88006263751 113.68 0.69232 113.68 113.34 114.03 7.6294E-06 238 50 9 0 0 0 7.4655E-05 4 71949 34.885 34.885 1 1.4873 1.5263 0 19346000 5884200 13462000 35514 1624;1656;1796 13460 13830 55509;55510;55511;55512 55511 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Unmodified _TTGIVMDSGDGVTHTVPIYEGYALPHAILR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.4138 4 796.659035 3182.60703 67261.47 1.0413 0.00082959 -0.1513 -0.00012054 0.89003 0.00070905 796.909418281599 799.662258001089 113.68 1.0235 113.68 113.23 114.26 0 499 76 12 0 0 0 2.5012E-06 4 71892 37.344 37.344 1 1.4067 1.4451 0 36335000 17382000 18953000 35515 1624;1656;1796 13460 13830 55513;55514;55515;55516 55513 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Unmodified _TTGIVMDSGDGVTHTVPIYEGYALPHAILR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1065.5482 3 1061.87629 3182.60703 60193.48 0.61686 0.00065503 -0.33133 -0.00035183 0.28553 0.0003032 1062.21079637928 1065.54620270713 112.58 0.56686 112.58 112.3 112.87 0 242 39 8 0 0 0 0.011051 1 72723 20.261 20.261 1 1.4706 1.6042 0 29716000 12137000 17579000 35516 1624;1656;1796 13460 13830 55517 55517 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Unmodified _TTGIVMDSGDGVTHTVPIYEGYALPHAILR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.4128 4 796.659035 3182.60703 68085.23 0.90668 0.00072231 -0.054236 -4.3208E-05 0.85244 0.00067911 796.910041809837 799.411931953281 112.6 0.7328 112.6 112.23 112.97 7.6294E-06 391 51 12 0 0 0 2.4848E-06 3 73047 37.424 37.424 1 1.4133 1.5588 0 41418000 19604000 21815000 35517 1624;1656;1796 13460 13830 55518;55519;55520 55520 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Unmodified _TTGIVMDSGDGVTHTVPIYEGYALPHAILR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1065.8804 3 1061.87629 3182.60703 58249.29 0.45623 0.00048446 -0.093928 -9.9739E-05 0.3623 0.00038472 1062.21055780259 1065.54671782791 123.19 0.68037 123.19 122.97 123.65 0 283 29 13 0 0 0 5.9082E-17 2 73501 71.528 67.238 1 2.5048 2.1608 0 78244000 22895000 55349000 35518 1624;1656;1796 13460 13830 55521;55522 55521 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Unmodified _TTGIVMDSGDGVTHTVPIYEGYALPHAILR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 796.9101 4 796.659035 3182.60703 66437.59 0.91116 0.00072588 0.39139 0.00031181 1.3026 0.0010377 796.910281873379 799.412137654222 123.19 1.4347 123.19 122.91 124.34 7.6294E-06 469 61 15 0 0 0 1.1054E-27 2 73533 106.51 106.51 1 2.4078 2.0908 0 225620000 63088000 162530000 35519 1624;1656;1796 13460 13830 55523;55524 55524 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Unmodified _TTGIVMDSGDGVTHTVPIYEGYALPHAILR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1065.214 3 1061.87629 3182.60703 58507.14 0.40026 0.00042503 -0.2569 -0.0002728 0.14336 0.00015223 1062.21067231676 1065.54643955727 123 0.66991 123 122.79 123.46 0 265 31 13 0 0 0 9.8783E-21 3 72472 86.519 86.519 1 2.4673 2.154 0 112580000 32707000 79872000 35520 1624;1656;1796 13460 13830 55525;55526;55527 55526 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Unmodified _TTGIVMDSGDGVTHTVPIYEGYALPHAILR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.4124 4 796.659035 3182.60703 66206.4 0.90979 0.00072479 0.17844 0.00014216 1.0882 0.00086695 796.910269435716 799.411974164657 123.02 1.5084 123.02 122.72 124.23 0 430 65 13 0 0 0 2.2224E-27 2 72481 100.27 100.27 1 2.4922 2.1774 0 273270000 77270000 196000000 35521 1624;1656;1796 13460 13830 55528;55529 55528 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 1 Unmodified _TTGIVMDSGDGVTHTVPIYEGYALPHAILR_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;A0AUL6;Q562Y6;Q562N8;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;P63261;I3L3I0;I3L1U9;I3L4N8;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACTG1;ACT Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 799.6625 4 796.659035 3182.60703 NaN NaN NaN 0.17408 0.00013869 NaN NaN NaN NaN 124.53 0.63899 124.53 124.26 124.89 7.6294E-06 0 0 0 0.051117 1 73743 15.162 12.755 1 NaN NaN 0 5783000 0 5783000 35522 1624;1656;1796 13460 13830 55530 55530 TTGLEEAAEAETAK 14 1 0 Unmodified _TTGLEEAAEAETAK_ 0 0 0 A0A024R704;P78362 A0A024R704 A0A024R704 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 710.8401 2 710.843736 1419.67292 71465.01 0.87883 0.00062471 -0.85426 -0.00060724 0.024568 1.7464E-05 710.842778692824 714.85052524474 48.543 0.56833 48.543 48.299 48.868 0 96 41 4 0 0 0 4.5059E-05 1 27199 93.839 79.721 1 1.6036 1.6024 0 15229000 6025700 9203700 35523 212 13461 13831 55531 55531 TTGLEEAAEAETAK 14 1 0 Unmodified _TTGLEEAAEAETAK_ 0 0 0 A0A024R704;P78362 A0A024R704 A0A024R704 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.8506 2 710.843736 1419.67292 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.75 1 48.75 48.25 49.25 0 0 0 0 1.741E-06 1 27333 98.898 70.171 1 35524 212 13461 13831 55532 55532 TTGNATVDHLSK 12 1 0 Unmodified _TTGNATVDHLSK_ 0 0 0 A0A024RCR9;Q06587;B4DW57 A0A024RCR9 A0A024RCR9 RING1 E3 ubiquitin-protein ligase RING1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8196 2 622.317491 1242.62043 76962.01 0.42184 0.00026252 0.017372 1.0811E-05 0.43921 0.00027333 622.317907782502 626.32376192042 19.962 0.41459 19.962 19.689 20.103 0 52 16 6 0 0 0 0.00018473 1 6280 90.827 83.548 1 0.80129 0.83051 0 18752000 9825800 8926500 35525 369 13462 13832 55533 55533 TTGNATVDHLSK 12 1 0 Unmodified _TTGNATVDHLSK_ 0 0 0 A0A024RCR9;Q06587;B4DW57 A0A024RCR9 A0A024RCR9 RING1 E3 ubiquitin-protein ligase RING1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.3254 2 622.317491 1242.62043 79163 0.14816 9.2201E-05 0.3416 0.00021258 0.48975 0.00030478 622.317704858399 626.324653841134 21.528 0.355 21.528 21.383 21.738 0 39 11 6 0 0 0 0.0053047 1 6544 51.286 51.286 1 1.4605 1.2266 0 1606200 614520 991710 35526 369 13462 13832 55534 55534 TTHFVEGGDAGNR 13 0 1 Unmodified _TTHFVEGGDAGNR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.8156 2 680.815647 1359.61674 73104.21 0.35949 0.00024475 0.83741 0.00057012 1.1969 0.00081487 680.815841010592 685.820557899629 19.956 0.40958 19.956 19.828 20.237 0 49 11 7 0 0 0 6.2691E-105 2 6432 247.22 233.46 1 1.0116 1.0862 0 46781000 23179000 23602000 35527 240 13463 13833 55535;55536 55535 TTHFVEGGDAGNR 13 0 1 Unmodified _TTHFVEGGDAGNR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.8154 2 680.815647 1359.61674 73068.83 -0.017761 -1.2092E-05 0.25486 0.00017351 0.23709 0.00016142 680.815574555812 685.819964619041 19.715 0.42042 19.715 19.597 20.018 -1.9073E-06 68 18 7 0 0 0 4.275E-75 2 6051 224.13 210.36 1 0.9322 1.0192 0 35587000 18005000 17582000 35528 240 13463 13833 55537;55538 55537 TTHFVEGGDAGNR 13 0 1 Unmodified _TTHFVEGGDAGNR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.2122 3 454.212857 1359.61674 88887.24 -0.42419 -0.00019267 0.61823 0.00028081 0.19404 8.8137E-05 454.213022216648 457.549193295211 19.73 0.51947 19.73 19.584 20.103 0 105 22 9 0 0 0 4.0405E-39 1 6052 140.45 127.69 1 0.91387 1.0392 0 122620000 65539000 57078000 35529 240 13463 13833 55539 55539 TTHFVEGGDAGNR 13 0 1 Unmodified _TTHFVEGGDAGNR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.8204 2 680.815647 1359.61674 74857.62 0.16819 0.00011451 0.39884 0.00027154 0.56703 0.00038604 680.815851873184 685.819845848606 21.251 0.17619 21.251 21.178 21.354 0 37 7 7 0 0 0 0.0073948 2 6345 56.359 53.507 1 0.82398 0.68829 0 3288900 1971500 1317400 35530 240 13463 13833 55540;55541 55541 TTHFVEGGDAGNR 13 0 1 Unmodified _TTHFVEGGDAGNR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 454.2125 3 454.212857 1359.61674 88600.6 -0.21739 -9.8743E-05 0.13334 6.0565E-05 -0.084052 -3.8178E-05 454.212724740433 457.548978786439 21.274 0.24638 21.274 21.164 21.41 0 47 10 7 0 0 0 0.032126 1 6367 14.969 14.534 1 0.83357 0.70216 0 4637200 2738300 1899000 35531 240 13463 13833 55542 55542 TTHFVEGGDAGNR 13 0 1 Unmodified _TTHFVEGGDAGNR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.8154 2 680.815647 1359.61674 73720.07 0.15275 0.00010399 0.41272 0.00028099 0.56547 0.00038498 680.815612190284 685.82018803652 20.996 0.35409 20.996 20.854 21.208 0 76 17 6 0 0 0 0.011999 1 5714 39.917 38.429 1 0.78753 0.68751 0 1283800 712490 571280 35532 240 13463 13833 55543 55543 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 1 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1068.5048 2 1058.49375 2114.97296 59356.92 0.57909 0.00061296 0.41984 0.0004444 0.99893 0.0010574 1058.99581098163 1068.50270228773 25.989 0.30311 25.989 25.793 26.096 0 64 14 6 0 0 0 0.022312 1 11386 36.284 30.791 1 0.92109 0.99769 0 24188000 12105000 12083000 35533 240 13464 13834 55544 55544 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 1 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.0013 4 529.750516 2114.97296 81143.77 0.53627 0.00028409 -0.061675 -3.2672E-05 0.47459 0.00025141 529.750535744215 534.754637162047 25.942 0.57477 25.942 25.763 26.338 1.9073E-06 222 33 11 0 0 0 9.4333E-13 2 11428 107.57 102.14 1 0.93699 1.0219 0 134280000 69567000 64715000 35534 240 13464 13834 55545;55546 55545 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 1 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3329 3 705.998262 2114.97296 72058.3 0.79857 0.00056379 0.13921 9.8283E-05 0.93778 0.00066207 705.998401012554 712.670567745854 25.965 0.58998 25.965 25.763 26.353 1.9073E-06 196 34 10 0 0 0 3.4204E-17 2 11431 119.62 119.62 1 0.87717 0.95613 0 110770000 58847000 51921000 35535 240 13464 13834 55547;55548 55547 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 1 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.3328 3 705.998262 2114.97296 71849.6 0.85916 0.00060657 -0.041278 -2.9142E-05 0.81789 0.00057743 706.33253537701 712.670476136353 25.165 0.55571 25.165 24.987 25.543 0 124 21 11 0 0 0 1.5904E-05 2 10762 53.779 53.779 1 0.87652 1.0517 0 300540000 162690000 137850000 35536 240 13464 13834 55549;55550 55549 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 1 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1058.9979 2 1058.49375 2114.97296 59019.5 0.70448 0.00074568 0.062777 6.6449E-05 0.76725 0.00081213 1058.99489065787 1069.00380638053 25.164 0.21844 25.164 25.062 25.28 0 51 7 9 0 0 0 5.5196E-05 2 10795 77.593 77.593 1 1.0026 1.1546 0 60675000 30998000 29676000 35537 240 13464 13834 55551;55552 55552 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 1 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.003 4 529.750516 2114.97296 82030.62 0.64678 0.00034263 0.078368 4.1516E-05 0.72515 0.00038415 530.001365527584 534.754790498372 25.16 0.50318 25.16 24.938 25.441 1.9073E-06 129 19 10 0 0 0 4.5713E-23 2 10789 129.11 125.87 1 0.95317 1.1382 0 249520000 137660000 111870000 35538 240 13464 13834 55553;55554 55553 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 1 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.6705 3 705.998262 2114.97296 72439.06 0.1961 0.00013845 0.33274 0.00023492 0.52884 0.00037336 705.998444223298 713.005076993598 29.864 0.49291 29.864 29.71 30.203 1.9073E-06 187 32 8 0 0 0 0.010199 2 11718 23.447 21.599 1 0.83641 0.75701 0 4372400 2302200 2070200 35539 240 13464 13834 55555;55556 55555 TTHYTPLACGSNPLK 15 1 0 Unmodified _TTHYTPLACGSNPLK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.615 3 553.94349 1658.80864 NaN NaN NaN -0.16211 -8.98E-05 NaN NaN NaN NaN 53.707 0.62252 53.707 53.509 54.131 3.8147E-06 0 0 0 0.00013925 1 30080 72.321 72.321 1 NaN NaN 0 15470000 0 15470000 35540 1398 13465 13835 55557 55557 TTHYTPLACGSNPLK 15 1 0 Unmodified _TTHYTPLACGSNPLK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.4183 2 830.411597 1658.80864 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.659 1 53.659 53.159 54.159 0 0 0 0 0.003374 1 30058 55.04 45.036 1 35541 1398 13465 13835 55558 55558 TTHYTPLACGSNPLK 15 1 0 Unmodified _TTHYTPLACGSNPLK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.6152 3 553.94349 1658.80864 80972.75 0.68201 0.00037779 -0.26748 -0.00014817 0.41453 0.00022963 553.94335850131 556.614714096789 52.382 0.76543 52.382 52.017 52.783 0 327 57 8 0 0 0 6.746E-05 2 29695 54.09 54.09 1 0.72292 0.80148 0 47489000 28513000 18976000 35542 1398 13465 13835 55559;55560 55560 TTHYTPLACGSNPLK 15 1 0 Unmodified _TTHYTPLACGSNPLK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.4107 2 830.411597 1658.80864 67654.86 0.88409 0.00073416 -0.027883 -2.3154E-05 0.85621 0.000711 830.411362290104 834.419144801522 52.41 0.46918 52.41 52.114 52.583 3.8147E-06 111 35 4 0 0 0 0.00021588 2 29764 75.479 70.094 1 0.70471 0.71616 0 16774000 8330600 8443500 35543 1398 13465 13835 55561;55562 55561 TTHYTPLACGSNPLK 15 1 0 Unmodified _TTHYTPLACGSNPLK_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.2777 3 553.94349 1658.80864 81725.68 0.33754 0.00018698 -0.25544 -0.0001415 0.082098 4.5478E-05 553.94346303363 556.614728234275 63.243 0.54926 63.243 63.005 63.554 3.8147E-06 201 49 6 0 0 0 0.044114 1 31742 11.375 11.375 1 0.69661 0.56724 0 4574100 2658000 1916200 35544 1398 13465 13835 55563 55563 TTIENIQLPHTLLSR 15 0 1 Unmodified _TTIENIQLPHTLLSR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.6631 3 579.328221 1734.96283 NaN NaN NaN -0.38574 -0.00022347 NaN NaN NaN NaN 112.47 0.32849 112.47 112.25 112.58 0 0 0 0 0.00015066 1 65331 68.044 56.989 1 NaN NaN 0 3224200 3224200 0 35545 235 13466 13836 55564 55564 TTIENIQLPHTLLSR 15 0 1 Unmodified _TTIENIQLPHTLLSR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.3282 3 579.328221 1734.96283 80382.8 0.52128 0.00030199 0.26715 0.00015477 0.78843 0.00045676 579.328188808702 582.999207193724 112.14 0.42043 112.14 111.99 112.41 0 101 21 7 0 0 0 0.0076704 2 64224 29.733 26.239 1 0.89063 0.74192 0 6304700 3414800 2889900 35546 235 13466 13836 55565;55566 55566 TTILQSTGK 9 1 0 Unmodified _TTILQSTGK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.7789 2 474.771657 947.528761 96650.71 0.34355 0.00016311 0.83803 0.00039787 1.1816 0.00056098 474.77216158784 478.779120249236 29.489 0.41542 29.489 29.262 29.677 -1.9073E-06 111 33 4 0 0 0 0.0040455 1 14210 70.256 46.101 1 1.7745 1.8138 0 28314000 7946500 20367000 35547 1851 13467 13837 55567 55567 TTILQSTGK 9 1 0 Unmodified _TTILQSTGK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.7795 2 474.771657 947.528761 96318.39 0.086533 4.1084E-05 0.80468 0.00038204 0.89121 0.00042312 474.772108048851 478.779137115398 29.099 0.30964 29.099 28.908 29.218 0 61 21 4 0 0 0 0.0021742 2 13895 75.825 51.67 1 1.6989 1.7782 0 34503000 12609000 21893000 35548 1851 13467 13837 55568;55569 55568 TTILQSTGK 9 1 0 Unmodified _TTILQSTGK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9;B4DV47;A0A0S2Z5N1 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.7795 2 474.771657 947.528761 100722.6 -0.010629 -5.0464E-06 0.95214 0.00045205 0.94151 0.000447 474.772112482247 478.779234706686 32.988 0.33252 32.988 32.796 33.129 0 55 19 4 0 0 0 0.032187 1 14372 45.161 22.421 1 1.7689 1.495 0 1997100 776480 1220600 35549 1851 13467 13837 55570 55570 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR 30 0 1 Unmodified _TTIPEEEEEEEEAAGVVVEEELFHQQGTPR_ 0 0 0 P20700;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1138.1954 3 1137.86187 3410.56377 56896.81 0.44074 0.0005015 -0.016509 -1.8785E-05 0.42423 0.00048271 1138.19630351396 1141.53224060365 119.14 0.76304 119.14 118.85 119.61 0 490 48 14 0 0 0 3.0044E-36 3 76461 124.08 124.08 1 1.1276 1.2951 0 140150000 65293000 74853000 35550 1502 13468 13838 55571;55572;55573 55572 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR 30 0 1 Unmodified _TTIPEEEEEEEEAAGVVVEEELFHQQGTPR_ 0 0 0 P20700;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1138.1956 3 1137.86187 3410.56377 57040.86 0.21866 0.0002488 -0.052958 -6.0259E-05 0.1657 0.00018855 1138.53038301126 1141.86648987143 118.74 0.7599 118.74 118.39 119.15 -7.6294E-06 442 47 15 0 0 0 1.8164E-35 2 77989 117.83 117.83 1 1.0886 1.2529 0 211890000 101350000 110540000 35551 1502 13468 13838 55574;55575 55575 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR 30 0 1 Unmodified _TTIPEEEEEEEEAAGVVVEEELFHQQGTPR_ 0 0 0 P20700;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1138.5276 3 1137.86187 3410.56377 56381.34 0.47084 0.00053575 -0.086711 -9.8666E-05 0.38412 0.00043708 1138.53024114833 1141.53210383286 132.35 0.89789 132.35 132.08 132.98 0 395 40 14 0 0 0 5.0577E-23 2 80395 90.123 90.123 1 1.0991 0.94546 0 49522000 23497000 26025000 35552 1502 13468 13838 55576;55577 55577 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR 30 0 1 Unmodified _TTIPEEEEEEEEAAGVVVEEELFHQQGTPR_ 0 0 0 P20700;B4DZT3 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1141.5327 3 1137.86187 3410.56377 56545.79 0.63763 0.00072553 0.056586 6.4387E-05 0.69421 0.00078992 1138.53042357169 1141.53220062544 132.08 0.86282 132.08 131.75 132.61 0 368 37 16 0 0 0 0.030585 1 79264 12.833 12.833 1 1.0767 0.93985 0 93985000 44419000 49566000 35553 1502 13468 13838 55578 55578 TTISVAHLLAAR 12 0 1 Unmodified _TTISVAHLLAAR_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;B4DT23;B4DY25;B3KTW4 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8728 2 626.872237 1251.72992 76812.85 0.82297 0.0005159 0.22483 0.00014094 1.0478 0.00065684 626.872194201755 631.876516276026 82.837 0.72795 82.837 82.508 83.236 0 161 61 5 0 0 0 0.0013223 2 49471 61.78 61.78 1 1.4344 1.4562 0 18242000 8831900 9410500 35554 1324 13469 13839 55579;55580 55580 TTISVAHLLAAR 12 0 1 Unmodified _TTISVAHLLAAR_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;B4DT23;B4DY25;B3KTW4 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.2504 3 418.250583 1251.72992 94432.79 0.44945 0.00018798 -0.13089 -5.4743E-05 0.31856 0.00013324 418.25047524916 421.58667143961 82.82 0.54492 82.82 82.467 83.012 0 94 36 4 0 0 0 0.034962 1 49586 23.468 23.468 1 1.4166 1.4712 0 22398000 11403000 10995000 35555 1324 13469 13839 55581 55581 TTISVAHLLAAR 12 0 1 Unmodified _TTISVAHLLAAR_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;B4DT23;B4DY25;B3KTW4 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.2541 3 418.250583 1251.72992 93463.04 0.34488 0.00014425 -0.41451 -0.00017337 -0.069632 -2.9124E-05 418.250268360619 421.586448822465 81.16 0.73403 81.16 80.782 81.516 0 186 50 5 0 0 0 0.0016327 2 49598 51.286 51.286 1 1.3756 1.4213 0 21617000 8709200 12907000 35556 1324 13469 13839 55582;55583 55583 TTISVAHLLAAR 12 0 1 Unmodified _TTISVAHLLAAR_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;B4DT23;B4DY25;B3KTW4 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 418.5853 3 418.250583 1251.72992 95702.31 -0.13904 -5.8152E-05 -0.021334 -8.9231E-06 -0.16037 -6.7075E-05 418.250529390544 421.586629695602 94.78 0.53363 94.78 94.356 94.89 -7.6294E-06 73 27 4 0 0 0 0.060645 1 53069 18.073 18.073 1 1.5041 1.2664 0 4583800 1844600 2739200 35557 1324 13469 13839 55584 55584 TTISVAHLLAAR 12 0 1 Unmodified _TTISVAHLLAAR_ 0 0 0 I6L9E8;Q8NCA5;E9PH82;B4DT23;B4DY25;B3KTW4 I6L9E8 I6L9E8 FAM98A Protein FAM98A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.877 2 626.872237 1251.72992 77700.34 0.6952 0.0004358 -0.26268 -0.00016467 0.43252 0.00027113 626.872072553488 631.876104409913 94.553 0.6077 94.553 94.143 94.751 0 149 37 6 0 0 0 0.0010217 1 51926 68.557 68.557 1 1.4138 1.173 0 5473700 2394400 3079200 35558 1324 13469 13839 55585 55585 TTITTTTTSSSGLGSPMIVGSPR 23 0 1 Oxidation (M) _TTITTTTTSSSGLGSPM(ox)IVGSPR_ TTITTTTTSSSGLGSPM(1)IVGSPR TTITTTTTSSSGLGSPM(48.9)IVGSPR 0 1 0 C9JJV6;C9JZL8;C9J5M0;C9JC07;B4DG42;A0A024R4N0;Q96S97 C9JJV6 C9JJV6 MYADM;hCG_1640809 Myeloid-associated differentiation marker MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1139.5797 2 1134.57302 2267.13149 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.02 1 80.02 79.52 80.52 0 0 0 0 0.00049175 1 47525 48.899 41.528 1 35559 158 13470 13840 55586 55586 134 TTITTTTTSSSGLGSPMIVGSPR 23 0 1 Oxidation (M) _TTITTTTTSSSGLGSPM(ox)IVGSPR_ TTITTTTTSSSGLGSPM(1)IVGSPR TTITTTTTSSSGLGSPM(68.26)IVGSPR 0 1 0 C9JJV6;C9JZL8;C9J5M0;C9JC07;B4DG42;A0A024R4N0;Q96S97 C9JJV6 C9JJV6 MYADM;hCG_1640809 Myeloid-associated differentiation marker MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1139.5787 2 1134.57302 2267.13149 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.19 1 79.19 78.69 79.69 0 0 0 0 1.3224E-06 1 48098 68.257 55.63 1 35560 158 13470 13840 55587 55587 134 TTIYEIQDDR 10 0 1 Unmodified _TTIYEIQDDR_ 0 0 0 D3DUZ3;Q16666;H3BR88 D3DUZ3 D3DUZ3 IFI16 Gamma-interferon-inducible protein 16 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.3067 2 627.304049 1252.59355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.478 1 54.478 53.978 54.978 0 0 0 0 0.016989 1 30636 54.982 46.449 1 35561 1196 13471 13841 55588 55588 TTIYEIQDDR 10 0 1 Unmodified _TTIYEIQDDR_ 0 0 0 D3DUZ3;Q16666;H3BR88 D3DUZ3 D3DUZ3 IFI16 Gamma-interferon-inducible protein 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.3035 2 627.304049 1252.59355 78321.15 0.32839 0.000206 -0.064118 -4.0222E-05 0.26427 0.00016578 627.303791644286 632.307673166884 64.128 0.67205 64.128 63.784 64.456 0 142 55 4 0 0 0 0.061838 1 32223 34.721 29.756 1 1.2055 1.0679 0 1913600 739830 1173700 35562 1196 13471 13841 55589 55589 TTLEGHLAK 9 1 0 Unmodified _TTLEGHLAK_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 489.2801 2 485.271824 968.529095 88272.19 0.20738 0.00010064 0.37862 0.00018374 0.58601 0.00028437 485.272053912723 489.279006560052 22.477 0.42766 22.477 22.233 22.66 0 98 27 6 0 0 0 0.0070864 1 8511 62.546 38.391 1 0.79773 0.78854 0 25688000 13183000 12505000 35563 371 13472 13842 55590 55590 TTLILPTQQVR 11 0 1 Unmodified _TTLILPTQQVR_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.3798 2 635.379894 1268.74524 NaN NaN NaN 0.33273 0.00021141 NaN NaN NaN NaN 81.232 0.64938 81.232 80.959 81.608 0 0 0 0 0.0050816 1 48317 65.347 49.144 1 NaN NaN 0 10897000 10897000 0 35564 2118 13473 13843 55591 55591 TTLILPTQQVR 11 0 1 Unmodified _TTLILPTQQVR_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3808 2 635.379894 1268.74524 77504.87 0.67376 0.00042809 0.41393 0.000263 1.0877 0.00069109 635.379736859285 640.384436882236 80.144 0.62499 80.144 79.906 80.531 7.6294E-06 129 49 5 0 0 0 0.00018166 1 48741 93.598 79.905 1 0.28221 0.27934 0 15437000 11750000 3687000 35565 2118 13473 13843 55592 55592 TTLILPTQQVR 11 0 1 Unmodified _TTLILPTQQVR_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.3851 2 635.379894 1268.74524 76934.1 0.55922 0.00035532 0.34447 0.00021887 0.90369 0.00057419 635.37957694578 640.384572430395 92.852 0.57132 92.852 92.63 93.202 0 147 34 6 0 0 0 0.01294 2 51779 47.603 45.161 1 1.0083 0.84238 0 3341200 1410300 1930900 35566 2118 13473 13843 55593;55594 55594 TTLILPTQQVR 11 0 1 Unmodified _TTLILPTQQVR_ 0 0 0 Q9UQR0;B4DZR9;B4DRC2 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 640.3853 2 635.379894 1268.74524 77196.23 0.35427 0.0002251 0.5816 0.00036954 0.93587 0.00059463 635.379534976315 640.384590326704 92.64 0.56509 92.64 92.439 93.004 0 138 33 6 0 0 0 0.0014303 2 50765 67.563 63.517 1 1.0096 0.88197 0 3543600 1682500 1861100 35567 2118 13473 13843 55595;55596 55595 TTLSASGTGFGDK 13 1 0 Unmodified _TTLSASGTGFGDK_ 0 0 0 A0A024QZW7;P49790 A0A024QZW7 A0A024QZW7 NUP153 Nuclear pore complex protein Nup153 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.3049 2 621.304049 1240.59355 77719.5 0.74513 0.00046295 0.39274 0.00024401 1.1379 0.00070696 621.30414224908 625.311506677532 42.647 0.46895 42.647 42.512 42.981 0 89 38 4 0 0 0 0.0017989 1 23029 56.359 35.489 1 1.455 1.5083 0 9825800 4807700 5018100 35568 31 13474 13844 55597 55597 TTLTAAITK 9 1 0 Unmodified _TTLTAAITK_ 0 0 0 P49411;H3BNU3 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2834 2 460.276575 918.538597 90346.4 0.29172 0.00013427 -0.60251 -0.00027732 -0.31078 -0.00014305 460.275956968534 464.28339574492 47.695 0.97478 47.695 47.226 48.201 3.8147E-06 189 84 5 0 0 0 0.021253 1 25881 49.536 49.536 1 5.0334 5.6569 0 69897000 17740000 52158000 35569 1580 13475 13845 55598 55598 TTNFAGILSQGLR 13 0 1 Unmodified _TTNFAGILSQGLR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.3781 2 689.377883 1376.74121 73967.44 0.74648 0.00051461 -0.29206 -0.00020134 0.45442 0.00031327 689.377798387816 694.38160657665 107.58 1.2583 107.58 107.15 108.41 -7.6294E-06 669 94 11 0 0 0 2.7429E-06 3 66815 109.24 99.004 1 0.63625 0.7528 0 320550000 197520000 123030000 35570 139 13476 13846 55599;55600;55601 55599 TTNFAGILSQGLR 13 0 1 Unmodified _TTNFAGILSQGLR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.3818 2 689.377883 1376.74121 74241.15 0.72667 0.00050095 -0.32764 -0.00022587 0.39903 0.00027508 689.377751187092 694.381621561956 106.93 1.2386 106.93 106.47 107.71 0 635 89 11 0 0 0 1.1795E-08 3 68014 143.73 130.61 1 0.64627 0.75049 0 349050000 215610000 133440000 35571 139 13476 13846 55602;55603;55604 55603 TTNFAGILSQGLR 13 0 1 Unmodified _TTNFAGILSQGLR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.3777 2 689.377883 1376.74121 73258.49 0.82763 0.00057055 0.025566 1.7625E-05 0.8532 0.00058818 689.377989820266 694.382069188783 119.24 0.82002 119.24 119 119.82 -7.6294E-06 247 36 12 0 0 0 1.5283E-13 2 70478 131.42 117.83 1 1.0597 0.91761 0 142600000 68301000 74304000 35572 139 13476 13846 55605;55606 55605 TTNFAGILSQGLR 13 0 1 Unmodified _TTNFAGILSQGLR_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.3827 2 689.377883 1376.74121 72464.73 0.69599 0.0004798 -0.14863 -0.00010246 0.54736 0.00037734 689.37781205087 694.381914694496 119.02 0.66072 119.02 118.75 119.41 0 204 27 10 0 0 0 7.6261E-05 2 69449 112.13 101.89 1 1.0636 0.92872 0 144650000 67598000 77048000 35573 139 13476 13846 55607;55608 55608 TTNIELQGVPNDEVHPLLGVK 21 1 0 Unmodified _TTNIELQGVPNDEVHPLLGVK_ 0 0 0 A0A024R9B5;B4DMM7;Q15291;B4DLF8 A0A024R9B5 A0A024R9B5 RBBP5 Retinoblastoma-binding protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.7442 3 758.40938 2272.20631 70163.28 0.49475 0.00037522 -0.12006 -9.1053E-05 0.37469 0.00028417 758.743892446212 761.414755980302 99.11 0.6097 99.11 98.816 99.425 0 255 49 8 0 0 0 0.0069472 1 60636 22.801 22.801 1 0.64412 0.63449 0 19631000 10962000 8668400 35574 272 13477 13847 55609 55609 TTNIELQGVPNDEVHPLLGVK 21 1 0 Unmodified _TTNIELQGVPNDEVHPLLGVK_ 0 0 0 A0A024R9B5;B4DMM7;Q15291;B4DLF8 A0A024R9B5 A0A024R9B5 RBBP5 Retinoblastoma-binding protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.409 3 758.40938 2272.20631 69640.8 0.68802 0.0005218 -0.12428 -9.4256E-05 0.56374 0.00042754 758.743682227817 761.74933760722 98.373 0.60687 98.373 98.071 98.678 0 243 52 7 0 0 0 4.1011E-08 1 61575 64.582 64.582 1 0.63808 0.70265 0 43003000 25490000 17513000 35575 272 13477 13847 55610 55610 TTNIELQGVPNDEVHPLLGVK 21 1 0 Unmodified _TTNIELQGVPNDEVHPLLGVK_ 0 0 0 A0A024R9B5;B4DMM7;Q15291;B4DLF8 A0A024R9B5 A0A024R9B5 RBBP5 Retinoblastoma-binding protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 761.4158 3 758.40938 2272.20631 69753.7 0.88957 0.00067466 -0.039975 -3.0318E-05 0.8496 0.00064434 758.743864195564 761.414813612595 111.47 0.47191 111.47 111.25 111.72 7.6294E-06 173 22 11 0 0 0 0.043204 1 64611 12.045 12.045 1 1.5985 1.2426 0 15357000 5807500 9549700 35576 272 13477 13847 55611 55611 TTNIELQGVPNDEVHPLLGVK 21 1 0 Unmodified _TTNIELQGVPNDEVHPLLGVK_ 0 0 0 A0A024R9B5;B4DMM7;Q15291;B4DLF8 A0A024R9B5 A0A024R9B5 RBBP5 Retinoblastoma-binding protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 758.7443 3 758.40938 2272.20631 69007.27 0.6868 0.00052087 0.11708 8.8796E-05 0.80388 0.00060967 758.743945542344 761.414951003745 111.31 0.4768 111.31 111.07 111.55 0 145 22 9 0 0 0 0.00078644 2 63625 31.917 31.917 1 1.4704 1.1815 0 16232000 7269800 8961800 35577 272 13477 13847 55612;55613 55613 TTPDVIFVFGFR 12 0 1 Unmodified _TTPDVIFVFGFR_ 0 0 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.3761 2 699.874445 1397.73434 72505.88 0.57879 0.00040508 0.3375 0.00023621 0.9163 0.00064129 699.874737951399 704.878691043763 128.47 0.9444 128.47 128.02 128.96 0 467 62 11 0 0 0 0.00023407 3 84075 85.67 85.67 1 0.68804 0.81242 0 250230000 149830000 100400000 35578 413 13478 13848 55614;55615;55616 55616 TTPDVIFVFGFR 12 0 1 Unmodified _TTPDVIFVFGFR_ 0 0 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.8751 2 699.874445 1397.73434 72610.96 1.0472 0.00073288 -0.095755 -6.7016E-05 0.9514 0.00066586 699.874516243779 704.878415300246 128.01 0.94753 128.01 127.63 128.58 -1.5259E-05 485 63 11 0 0 0 0.00018029 3 85548 91.087 91.087 1 0.68701 0.80192 0 529470000 310790000 218680000 35579 413 13478 13848 55617;55618;55619 55618 TTPDVIFVFGFR 12 0 1 Unmodified _TTPDVIFVFGFR_ 0 0 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.8743 2 699.874445 1397.73434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.17 1 129.17 128.67 129.67 0 0 0 0 0.0093103 1 86256 57.598 47.075 1 35580 413 13478 13848 55620 55620 TTPDVIFVFGFR 12 0 1 Unmodified _TTPDVIFVFGFR_ 0 0 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.8744 2 699.874445 1397.73434 70826.96 0.74527 0.0005216 -0.028871 -2.0206E-05 0.7164 0.00050139 699.874311316476 705.379744960365 134.88 0.64955 134.88 134.75 135.4 -1.5259E-05 41 24 7 0 0 0 6.2879E-05 2 82578 97.965 97.965 1 0.75228 0.65162 0 150760000 100790000 49969000 35581 413 13478 13848 55621;55622 55622 TTPDVIFVFGFR 12 0 1 Unmodified _TTPDVIFVFGFR_ 0 0 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.8783 2 699.874445 1397.73434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.89 1 134.89 134.39 135.39 0 0 0 0 0.0012538 1 82580 70.1 55.162 1 35582 413 13478 13848 55623 55623 TTPDVIFVFGFR 12 0 1 Unmodified _TTPDVIFVFGFR_ 0 0 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 699.8754 2 699.874445 1397.73434 NaN NaN NaN 0.35434 0.00024799 NaN NaN NaN NaN 134.84 0.6687 134.84 134.63 135.3 0 0 0 0 8.15E-20 1 81648 133.13 123.78 1 NaN NaN 0 115690000 115690000 0 35583 413 13478 13848 55624 55624 TTPDVIFVFGFR 12 0 1 Unmodified _TTPDVIFVFGFR_ 0 0 0 E7ETK0;A0A087WUS0;P62847 E7ETK0 E7ETK0 RPS24 40S ribosomal protein S24 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.879 2 699.874445 1397.73434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.85 1 134.85 134.35 135.35 0 0 0 0 1.1072E-06 1 81647 99.855 70.081 1 35584 413 13478 13848 55625 55625 TTPSGLQIMPLK 12 1 0 Oxidation (M) _TTPSGLQIM(ox)PLK_ TTPSGLQIM(1)PLK TTPSGLQIM(70.03)PLK 0 1 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3676 2 651.360313 1300.70607 75872.1 0.61808 0.00040259 -0.22866 -0.00014894 0.38941 0.00025365 651.360251676268 655.367043531387 77.501 0.7571 77.501 77.129 77.886 0 233 61 6 0 0 0 0.00024354 2 45712 70.028 63.338 1 1.8436 1.8253 0 25813000 9617000 16196000 35585 503 13479 13849 55626;55627 55626 354 TTPSGLQIMPLK 12 1 0 Oxidation (M) _TTPSGLQIM(ox)PLK_ TTPSGLQIM(1)PLK TTPSGLQIM(74.46)PLK 0 1 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.3677 2 651.360313 1300.70607 76070.45 0.26047 0.00016966 0.28397 0.00018496 0.54443 0.00035462 651.360440517509 655.367531439297 76.446 0.59731 76.446 76.138 76.735 0 195 45 6 0 0 0 9.8464E-05 1 46126 74.464 66.539 1 1.8422 1.8872 0 25553000 9190100 16363000 35586 503 13479 13849 55628 55628 354 TTPSVVAFTADGER 14 0 1 Unmodified _TTPSVVAFTADGER_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;D6RJI2;D6RA73 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.8672 2 725.862263 1449.70997 70839.22 0.72743 0.00052801 0.0064823 4.7053E-06 0.73391 0.00053272 725.862234660897 730.866327461334 74.354 0.98758 74.354 73.91 74.898 -7.6294E-06 439 85 7 0 0 0 0.00015067 2 44560 89.403 82.744 1 2.3427 2.6746 0 92026000 25935000 66091000 35587 1092 13480 13850 55629;55630 55629 TTPSVVAFTADGER 14 0 1 Unmodified _TTPSVVAFTADGER_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;D6RJI2;D6RA73 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.8665 2 725.862263 1449.70997 NaN NaN NaN 0.1196 8.6815E-05 NaN NaN NaN NaN 85.969 0.96619 85.969 85.704 86.67 0 0 0 0 0.0025783 1 46985 65.179 60.285 1 NaN NaN 0 5008700 0 5008700 35588 1092 13480 13850 55631 55631 TTPSYVAFTDTER 13 0 1 Unmodified _TTPSYVAFTDTER_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DI39;B4DWK5;B4DNX1;B4E1T6;B4DNV4;Q53FC7;B3KSM6;B2R6X5;P17066;P48741;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;B3KTV0;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;A0A024R6B5;P54652;E9PI65;B3KUS2 A8K5I0;Q53FC7;V9HW22 V9HW22 HEL-S-103;HSPA1B;HSPA1A;HSPA6;HSPA7;HEL-S-72p;HSPA8;HSPA2 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3548 2 744.354271 1486.69399 70372.09 0.68577 0.00051045 0.10228 7.613E-05 0.78804 0.00058658 744.354397965845 749.358354901813 71.551 1.7551 71.551 70.856 72.611 7.6294E-06 910 142 10 0 0 0 7.4345E-19 4 41897 144.17 144.17 1 1.0604 1.2555 0 381140000 190520000 190630000 35589 1467;533;845 13481 13851 55632;55633;55634;55635 55634 TTPSYVAFTDTER 13 0 1 Unmodified _TTPSYVAFTDTER_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DI39;B4DWK5;B4DNX1;B4E1T6;B4DNV4;Q53FC7;B3KSM6;B2R6X5;P17066;P48741;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;B3KTV0;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;A0A024R6B5;P54652;E9PI65;B3KUS2 A8K5I0;Q53FC7;V9HW22 V9HW22 HEL-S-103;HSPA1B;HSPA1A;HSPA6;HSPA7;HEL-S-72p;HSPA8;HSPA2 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.3545 2 744.354271 1486.69399 70153.55 0.62464 0.00046496 0.024943 1.8567E-05 0.64959 0.00048352 744.354334259899 749.358337715791 70.446 1.4259 70.446 69.694 71.12 0 790 114 10 0 0 0 5.8651E-05 3 42225 96.015 96.015 1 1.0608 1.2341 0 404320000 205980000 198340000 35590 1467;533;845 13481 13851 55636;55637;55638 55638 TTPSYVAFTDTER 13 0 1 Unmodified _TTPSYVAFTDTER_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DI39;B4DWK5;B4DNX1;B4E1T6;B4DNV4;Q53FC7;B3KSM6;B2R6X5;P17066;P48741;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;B3KTV0;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;A0A024R6B5;P54652;E9PI65;B3KUS2 A8K5I0;Q53FC7;V9HW22 V9HW22 HEL-S-103;HSPA1B;HSPA1A;HSPA6;HSPA7;HEL-S-72p;HSPA8;HSPA2 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.3551 2 744.354271 1486.69399 69715.57 0.72561 0.00054011 0.1121 8.344E-05 0.83771 0.00062355 744.354460125289 749.358265395322 81.877 1.5859 81.877 81.142 82.728 0 591 96 10 0 0 0 0.00021073 2 44247 69.979 69.979 1 1.2108 1.0436 0 68070000 30332000 37739000 35591 1467;533;845 13481 13851 55639;55640 55640 TTPSYVAFTDTER 13 0 1 Unmodified _TTPSYVAFTDTER_ 0 0 0 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DI39;B4DWK5;B4DNX1;B4E1T6;B4DNV4;Q53FC7;B3KSM6;B2R6X5;P17066;P48741;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;B3KTV0;E9PNE6;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;A0A024R6B5;P54652;E9PI65;B3KUS2 A8K5I0;Q53FC7;V9HW22 V9HW22 HEL-S-103;HSPA1B;HSPA1A;HSPA6;HSPA7;HEL-S-72p;HSPA8;HSPA2 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 749.3591 2 744.354271 1486.69399 69354.53 0.50412 0.00037524 0.24041 0.00017895 0.74453 0.00055419 744.35451712106 749.358393742161 82.15 2.0249 82.15 81.303 83.328 0 624 114 9 0 0 0 0.00012284 2 43568 77.64 61.009 1 1.1912 1.0394 0 63385000 28986000 34399000 35592 1467;533;845 13481 13851 55641;55642 55642 TTQFSCTLGEK 11 1 0 Unmodified _TTQFSCTLGEK_ 0 0 0 E7DVW5;Q01469;I6L8B7 E7DVW5 E7DVW5 FABP5 Fatty acid-binding protein, epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3021 2 636.300452 1270.58635 NaN NaN NaN 0.079425 5.0538E-05 NaN NaN NaN NaN 42.908 0.50549 42.908 42.587 43.092 0 0 0 0 0.0026738 1 23157 72.325 66.843 1 NaN NaN 0 4676300 4676300 0 35593 1217 13482 13852 55643 55643 TTQIINITMTK 11 1 0 Oxidation (M) _TTQIINITM(ox)TK_ TTQIINITM(1)TK TTQIINITM(71.03)TK 0 1 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.3505 2 640.349945 1278.68534 74053.52 0.35601 0.00022797 -0.39627 -0.00025375 -0.040252 -2.5776E-05 640.350338064898 644.356125975336 66.477 0.67377 66.477 66.197 66.871 0 128 53 4 0 0 0 0.00047358 1 38339 71.03 71.03 1 1.0696 1.0876 0 10316000 4779600 5536000 35594 186;1747 13483 13853 55644 55644 152 TTQIINITMTK 11 1 0 Oxidation (M) _TTQIINITM(ox)TK_ TTQIINITM(1)TK TTQIINITM(76.62)TK 0 1 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3508 2 640.349945 1278.68534 72399.26 0.53712 0.00034395 -0.17355 -0.00011113 0.36357 0.00023281 640.350387328586 644.356552660894 65.174 0.73071 65.174 64.984 65.715 0 135 60 4 0 0 0 0.00022378 1 38582 76.619 76.619 1 1.3734 1.4161 0 11531000 5610200 5920800 35595 186;1747 13483 13853 55645 55645 152 TTQIPQYLYEGGISR 15 0 1 Unmodified _TTQIPQYLYEGGISR_ 0 0 0 B4DIS6;Q9H6R0 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.4453 2 863.443951 1724.87335 66226.55 1.0454 0.00090269 -0.1352 -0.00011674 0.91025 0.00078595 863.443820761913 868.448276559328 92.17 0.59611 92.17 91.915 92.511 0 245 57 6 0 0 0 0.0003407 2 55975 71.241 71.241 1 1.3543 1.3943 0 24817000 8943700 15874000 35596 983 13484 13854 55646;55647 55647 TTQIPQYLYEGGISR 15 0 1 Unmodified _TTQIPQYLYEGGISR_ 0 0 0 B4DIS6;Q9H6R0 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.4468 2 863.443951 1724.87335 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.025 1 92.025 91.525 92.525 0 0 0 0 0.0023643 1 55766 56.122 41.305 1 35597 983 13484 13854 55648 55648 TTQIPQYLYEGGISR 15 0 1 Unmodified _TTQIPQYLYEGGISR_ 0 0 0 B4DIS6;Q9H6R0 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.45 2 863.443951 1724.87335 65453.96 0.63135 0.00054513 0.30146 0.0002603 0.93281 0.00080543 863.444615777691 868.448616393171 91.568 0.55917 91.568 91.285 91.844 0 152 48 5 0 0 0 0.00029841 1 56616 73.848 73.848 1 1.4131 1.4788 0 22674000 11515000 11158000 35598 983 13484 13854 55649 55649 TTQIPQYLYEGGISR 15 0 1 Unmodified _TTQIPQYLYEGGISR_ 0 0 0 B4DIS6;Q9H6R0 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 863.4443 2 863.443951 1724.87335 NaN NaN NaN -0.47088 -0.00040658 NaN NaN NaN NaN 91.684 0.25978 91.684 91.553 91.813 0 0 0 0 0.0024206 1 56773 63.091 56.708 1 NaN NaN 0 9838100 9838100 0 35599 983 13484 13854 55650 55650 TTQIPQYLYEGGISR 15 0 1 Unmodified _TTQIPQYLYEGGISR_ 0 0 0 B4DIS6;Q9H6R0 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 863.9464 2 863.443951 1724.87335 64946.93 0.52867 0.00045648 0.18359 0.00015852 0.71226 0.000615 863.444115481813 868.448357070965 105.76 0.62712 105.76 105.52 106.15 -7.6294E-06 161 34 7 0 0 0 0.00077845 2 60378 50.207 50.207 1 1.3419 1.155 0 7454900 3062000 4392900 35600 983 13484 13854 55651;55652 55652 TTQIPQYLYEGGISR 15 0 1 Unmodified _TTQIPQYLYEGGISR_ 0 0 0 B4DIS6;Q9H6R0 B4DIS6 B4DIS6 DHX33 Putative ATP-dependent RNA helicase DHX33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 863.4442 2 863.443951 1724.87335 64948.32 0.43011 0.00037138 0.33971 0.00029332 0.76982 0.0006647 863.44387922286 868.448482146919 105.6 0.64889 105.6 105.35 106 0 205 44 6 0 0 0 0.0034306 1 59359 42.095 36.25 1 1.3978 1.1619 0 7584400 2952800 4631600 35601 983 13484 13854 55653 55653 TTQPSINESESDPFEVVR 18 0 1 Unmodified _TTQPSINESESDPFEVVR_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1022.9875 2 1017.98437 2033.95418 61351.69 0.25151 0.00025604 -0.32486 -0.0003307 -0.073349 -7.4668E-05 1018.48553312961 1022.98852534499 92.592 0.29585 92.592 92.511 92.807 0 61 27 5 0 0 0 0.011919 1 56126 39.424 39.424 1 0.82281 0.83135 0 7719500 3828000 3891500 35602 104 13485 13855 55654 55654 TTQPSINESESDPFEVVR 18 0 1 Unmodified _TTQPSINESESDPFEVVR_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1022.9884 2 1017.98437 2033.95418 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.975 1 91.975 91.475 92.475 0 0 0 0 1.4464E-06 1 56971 86.291 74.498 1 35603 104 13485 13855 55655 55655 TTQPSINESESDPFEVVRDDFK 22 1 1 Unmodified _TTQPSINESESDPFEVVRDDFK_ 0 0 1 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.7406 3 847.397757 2539.17144 66728.58 0.81671 0.00069208 -0.18587 -0.0001575 0.63084 0.00053458 847.73240277204 853.739709133203 105.25 0.54266 105.25 104.98 105.52 -7.6294E-06 180 41 7 0 0 0 3.3618E-05 1 65150 37.672 29.775 1 1.1408 1.2209 0 12749000 5775000 6974200 35604 104 13486 13856 55656 55656 TTQPSINESESDPFEVVRDDFK 22 1 1 Unmodified _TTQPSINESESDPFEVVRDDFK_ 0 0 1 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.3986 3 847.397757 2539.17144 67684.62 0.9325 0.0007902 0.14932 0.00012653 1.0818 0.00091673 847.731937267112 853.739660350962 104.59 0.48851 104.59 104.32 104.81 7.6294E-06 181 37 7 0 0 0 0.0001134 1 66232 36.523 33.642 1 1.2435 1.4019 0 14292000 6637300 7655100 35605 104 13486 13856 55657 55657 TTQPSINESESDPFEVVRDDFK 22 1 1 Unmodified _TTQPSINESESDPFEVVRDDFK_ 0 0 1 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 847.7329 3 847.397757 2539.17144 64687.03 0.55008 0.00046613 0.2045 0.0001733 0.75458 0.00063943 847.732203479464 853.740067748814 116.38 0.54967 116.38 116.12 116.66 0 149 23 10 0 0 0 3.671E-07 1 68334 49.577 46.695 1 1.5188 1.3024 0 10821000 4323400 6497100 35606 104 13486 13856 55658 55658 TTQPSINESESDPFEVVRDDFK 22 1 1 Unmodified _TTQPSINESESDPFEVVRDDFK_ 0 0 1 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 847.7327 3 847.397757 2539.17144 65325.11 0.92478 0.00078366 0.31919 0.00027048 1.244 0.0010541 847.732449296971 853.740226233129 116.23 0.56409 116.23 116.03 116.59 -7.6294E-06 172 26 10 0 0 0 0.057737 1 67333 12.929 10.128 1 1.4928 1.2633 0 12005000 4490000 7514800 35607 104 13486 13856 55659 55659 TTQVPQFILDDFIQNDR 17 0 1 Unmodified _TTQVPQFILDDFIQNDR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1025.516 2 1025.51564 2049.01672 59890.5 0.85234 0.00087408 -0.10854 -0.00011131 0.7438 0.00076278 1026.01691531233 1030.51971791406 126.62 1.2099 126.62 126.12 127.33 0 584 81 12 0 0 0 6.7475E-05 3 82284 72.321 66.135 1 1.3046 1.5163 0 180610000 79866000 100750000 35608 1691 13487 13857 55660;55661;55662 55661 TTQVPQFILDDFIQNDR 17 0 1 Unmodified _TTQVPQFILDDFIQNDR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1026.0188 2 1025.51564 2049.01672 60024.68 0.60092 0.00061625 0.14055 0.00014414 0.74147 0.00076039 1026.01721077505 1030.51996881206 126.28 1.2549 126.28 125.72 126.97 0 527 78 12 0 0 0 7.722E-18 2 84071 126.63 120.45 1 1.2879 1.4813 0 205620000 89866000 115750000 35609 1691 13487 13857 55663;55664 55664 TTQVPQFILDDFIQNDR 17 0 1 Unmodified _TTQVPQFILDDFIQNDR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1030.4923 2 1025.51564 2049.01672 57576.61 0.6315 0.00064762 -0.88314 -0.00090567 -0.25164 -0.00025806 1026.01637053406 1030.51973528259 134.68 0.16641 134.68 134.59 134.76 0 24 3 8 0 0 0 8.4473E-05 1 81505 61.641 50.371 1 1.3742 1.1993 0 75152000 31000000 44152000 35610 1691 13487 13857 55665 55665 TTSHLLR 7 0 1 Unmodified _TTSHLLR_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.2405 2 414.240327 826.466101 90846.22 -0.11514 -4.7697E-05 -0.20387 -8.4453E-05 -0.31902 -0.00013215 414.23965498834 419.244612356987 19.95 0.48507 19.95 19.752 20.237 0 32 15 5 0 0 0 0.026711 1 6440 76.847 53.827 1 0.71119 0.74737 0 11586000 6268100 5317600 35611 1680 13488 13858 55666 55666 TTSSAIYMNLASHIQPGTVNR 21 0 1 Oxidation (M) _TTSSAIYM(ox)NLASHIQPGTVNR_ TTSSAIYM(1)NLASHIQPGTVNR TTSSAIYM(53.58)NLASHIQPGTVNR 0 1 0 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.0508 3 759.714586 2276.12193 69309.07 0.67457 0.00051248 0.13072 9.9308E-05 0.80529 0.00061179 760.049274710421 763.384351372195 86.282 0.68905 86.282 85.896 86.585 0 249 55 8 0 0 0 2.6006E-07 1 51790 53.585 53.585 1 0.7894 0.82262 0 21615000 11122000 10493000 35612 591 13489 13859 55667 55667 449 TTSSAIYMNLASHIQPGTVNR 21 0 1 Oxidation (M) _TTSSAIYM(ox)NLASHIQPGTVNR_ TTSSAIYM(1)NLASHIQPGTVNR TTSSAIYM(106.49)NLASHIQPGTVNR 0 1 0 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.0504 3 759.714586 2276.12193 69592.08 0.57006 0.00043308 -0.67101 -0.00050978 -0.10095 -7.6695E-05 760.048789243378 763.051035921387 85.358 1.0274 85.358 84.62 85.648 7.6294E-06 224 86 5 0 0 0 3.9807E-16 1 52539 106.49 106.49 1 0.9196 0.99766 0 27932000 13602000 14331000 35613 591 13489 13859 55668 55668 449 TTSSAIYMNLASHIQPGTVNR 21 0 1 Oxidation (M) _TTSSAIYM(ox)NLASHIQPGTVNR_ TTSSAIYM(1)NLASHIQPGTVNR TTSSAIYM(56.08)NLASHIQPGTVNR 0 1 0 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.0513 3 759.714586 2276.12193 NaN NaN NaN -0.44257 -0.00033623 NaN NaN NaN NaN 85.209 0.36653 85.209 84.957 85.324 0 0 0 0 9.588E-06 1 52385 56.081 51.554 1 NaN NaN 0 10258000 0 10258000 35614 591 13489 13859 55669 55669 449 TTTAAAVASTGPSSR 15 0 1 Unmodified _TTTAAAVASTGPSSR_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;H7C4C5;B5MEG9 H0Y2V1 H0Y2V1 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.355 2 689.352062 1376.68957 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.158 1 25.158 24.658 25.658 0 0 0 0 4.1267E-07 1 10802 101.71 86.836 1 35615 123 13490 13860 55670 55670 TTTAAAVASTGPSSR 15 0 1 Unmodified _TTTAAAVASTGPSSR_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;H7C4C5;B5MEG9 H0Y2V1 H0Y2V1 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.3563 2 689.352062 1376.68957 73736.51 0.44306 0.00030543 0.48133 0.0003318 0.92439 0.00063723 689.352888217308 694.356597421458 28.376 0.39078 28.376 28.181 28.571 1.9073E-06 73 19 5 0 0 0 0.033274 3 11331 34 25.487 1 0.99948 0.8829 0 1470300 709620 760690 35616 123 13490 13860 55671;55672;55673 55672 TTTGPPHLVPPQPLPR 16 0 1 Unmodified _TTTGPPHLVPPQPLPR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.3253 3 569.98954 1706.94679 80044.85 0.68719 0.00039169 0.096092 5.4771E-05 0.78329 0.00044646 570.32403483808 573.325472726244 75.66 0.62878 75.66 75.358 75.986 0 302 54 7 0 0 0 4.8014E-05 2 44467 73.887 73.887 1 0.7507 0.76793 0 34968000 20074000 14895000 35617 44 13491 13861 55674;55675 55675 TTTGPPHLVPPQPLPR 16 0 1 Unmodified _TTTGPPHLVPPQPLPR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.3243 3 569.98954 1706.94679 81002.27 0.73978 0.00042167 -0.063208 -3.6028E-05 0.67657 0.00038564 570.323736130697 573.325500680055 74.303 0.78757 74.303 73.85 74.638 0 305 66 7 0 0 0 4.7347E-05 2 44763 68.944 68.944 1 0.7613 0.8327 0 39561000 23099000 16462000 35618 44 13491 13861 55676;55677 55676 TTTGPPHLVPPQPLPR 16 0 1 Unmodified _TTTGPPHLVPPQPLPR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.3254 3 569.98954 1706.94679 79926.89 0.43951 0.00025051 0.28403 0.00016189 0.72353 0.00041241 569.989675981976 573.660098350899 86.416 0.70663 86.416 86.114 86.821 0 282 48 9 0 0 0 0.02542 2 47295 20.737 20.737 1 1.6042 1.3789 0 7840500 2836200 5004300 35619 44 13491 13861 55678;55679 55678 TTTGPPHLVPPQPLPR 16 0 1 Unmodified _TTTGPPHLVPPQPLPR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.3265 3 569.98954 1706.94679 80200.05 0.47948 0.0002733 -0.050225 -2.8628E-05 0.42925 0.00024467 569.98943532333 573.325409569271 86.314 0.74309 86.314 86.012 86.755 0 231 42 8 0 0 0 0.0008376 2 46423 39.685 39.685 1 1.7871 1.4903 0 6456300 2302000 4154300 35620 44 13491 13861 55680;55681 55680 TTTIYEEDK 9 1 0 Unmodified _TTTIYEEDK_ 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.2683 2 550.261319 1098.50808 82474.2 0.66923 0.00036825 0.64068 0.00035254 1.3099 0.00072079 550.261561456222 554.268534979988 26.329 0.35362 26.329 26.115 26.469 0 75 23 5 0 0 0 0.0011834 1 11772 88.819 80.056 1 1.1594 1.1407 0 23849000 14217000 9631500 35621 1312 13492 13862 55682 55682 TTTIYEEDKR 10 1 1 Unmodified _TTTIYEEDKR_ 0 0 1 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.3234 2 628.311874 1254.6092 NaN NaN NaN 0.51429 0.00032313 NaN NaN NaN NaN 22.366 0.32605 22.366 22.205 22.532 1.9073E-06 0 0 0 0.0088812 1 7146 64.654 55.791 1 NaN NaN 0 1193000 0 1193000 35622 1312 13493 13863 55683 55683 TTTLSGTAPAAGVVPSR 17 0 1 Unmodified _TTTLSGTAPAAGVVPSR_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;B4DSQ1;H7C4C5;B5MEG9 H0Y2V1 H0Y2V1 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.4366 2 793.430844 1584.84713 NaN NaN NaN -0.14461 -0.00011473 NaN NaN NaN NaN 65.463 0.47346 65.463 65.212 65.685 0 0 0 0 1.4073E-06 1 37606 80.469 70.781 1 NaN NaN 0 6650100 0 6650100 35623 123 13494 13864 55684 55684 TTTLSGTAPAAGVVPSR 17 0 1 Unmodified _TTTLSGTAPAAGVVPSR_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;B4DSQ1;H7C4C5;B5MEG9 H0Y2V1 H0Y2V1 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.4286 2 793.430844 1584.84713 68830.6 0.65056 0.00051618 -0.55851 -0.00044314 0.092054 7.3038E-05 793.932383290005 798.434720411901 64.321 0.46468 64.321 64.106 64.571 0 161 43 5 0 0 0 6.0635E-05 3 37841 75.589 68.929 1 1.2877 1.2911 0 17951000 7949300 10001000 35624 123 13494 13864 55685;55686;55687 55687 TTTLSGTAPAAGVVPSR 17 0 1 Unmodified _TTTLSGTAPAAGVVPSR_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;B4DSQ1;H7C4C5;B5MEG9 H0Y2V1 H0Y2V1 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 798.4341 2 793.430844 1584.84713 69900.18 0.6778 0.00053779 -0.035683 -2.8312E-05 0.64212 0.00050948 793.932425104026 798.43478844633 75.062 0.51929 75.062 74.829 75.348 0 156 37 6 0 0 0 0.019823 1 39861 25.448 25.448 1 1.0423 0.89861 0 2653700 1282600 1371100 35625 123 13494 13864 55688 55688 TTTPGPSLSQGVSVDEK 17 1 0 Unmodified _TTTPGPSLSQGVSVDEK_ 0 0 0 A0PJ71;A0A0C4DG07;A8K1D3;A6H8Y5;O60934 A0PJ71 A0PJ71 NBN Nibrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 852.4321 2 851.928331 1701.84211 68864.31 0.64992 0.00055369 -0.24333 -0.0002073 0.4066 0.00034639 851.928007645858 855.93523777294 61.866 0.34996 61.866 61.708 62.058 0 82 28 4 0 0 0 6.7271E-05 6 35439 72.496 64.929 1 0.82577 0.81767 0 9465600 5015400 4450200 35626 509 13495 13865 55689;55690;55691;55692;55693;55694 55691 TTTVNIGSISTADGSALVK 19 1 0 Unmodified _TTTVNIGSISTADGSALVK_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.0009 2 917.991463 1833.96837 64159.96 0.59501 0.00054622 0.080242 7.3661E-05 0.67525 0.00061988 917.991533320444 922.500191097765 95.394 0.60824 95.394 95.122 95.73 0 251 45 8 0 0 0 1.1811E-06 2 57856 85.837 85.837 1 0.88115 0.9497 0 33949000 19217000 14732000 35627 1959 13496 13866 55695;55696 55695 TTTVNIGSISTADGSALVK 19 1 0 Unmodified _TTTVNIGSISTADGSALVK_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 921.9985 2 917.991463 1833.96837 63522.4 0.63133 0.00057956 0.061882 5.6807E-05 0.69322 0.00063637 918.492971503012 921.998456886211 94.695 0.59682 94.695 94.433 95.03 -7.6294E-06 264 49 7 0 0 0 2.9863E-17 2 58761 123.02 123.02 1 0.88752 0.97333 0 41052000 22064000 18988000 35628 1959 13496 13866 55697;55698 55698 TTTVNIGSISTADGSALVK 19 1 0 Unmodified _TTTVNIGSISTADGSALVK_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 922.0008 2 917.991463 1833.96837 63663.42 0.65952 0.00060543 0.23351 0.00021436 0.89303 0.00081979 918.493148354818 921.998672517039 108.97 0.5703 108.97 108.76 109.33 7.6294E-06 167 28 10 0 0 0 7.55E-06 2 62625 76.759 76.759 1 0.97224 0.78605 0 23031000 11405000 11626000 35629 1959 13496 13866 55699;55700 55700 TTTVNIGSISTADGSALVK 19 1 0 Unmodified _TTTVNIGSISTADGSALVK_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 921.9984 2 917.991463 1833.96837 63373.73 0.50198 0.00046081 0.17635 0.00016189 0.67833 0.00062271 918.493039820849 921.998809375724 108.88 0.55651 108.88 108.68 109.24 0 171 26 10 0 0 0 3.0377E-08 3 61670 94.09 94.09 1 1.0622 0.85005 0 21238000 10774000 10464000 35630 1959 13496 13866 55701;55702;55703 55703 TTVPQLLASVQR 12 0 1 Unmodified _TTVPQLLASVQR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.8833 2 656.882801 1311.75105 76060.66 0.74472 0.0004892 -0.081542 -5.3564E-05 0.66318 0.00043563 656.882533418088 661.887001073703 110.65 0.51904 110.65 110.43 110.95 0 74 26 4 0 0 0 0.0053086 1 63049 51.276 41.323 1 2.1535 1.8807 0 2577200 764820 1812400 35631 397;1622 13497 13867 55704 55704 TTYLVLDEADR 11 0 1 Unmodified _TTYLVLDEADR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.3317 2 648.327524 1294.6405 75580.26 0.79177 0.00051333 -0.010071 -6.529E-06 0.7817 0.0005068 648.32749726927 653.331654850519 79.451 0.87233 79.451 79.116 79.989 0 354 76 7 0 0 0 1.8556E-12 2 47028 142.43 130.14 1 1.4054 1.5323 0 51530000 23318000 28212000 35632 1009 13498 13868 55705;55706 55705 TTYLVLDEADR 11 0 1 Unmodified _TTYLVLDEADR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3318 2 648.327524 1294.6405 75241.84 0.51822 0.00033598 0.26097 0.00016919 0.7792 0.00050517 648.327636355256 653.331770445202 78.444 0.83986 78.444 78.08 78.92 0 396 72 7 0 0 0 0.0003263 2 47393 87.258 83 1 1.3265 1.5298 0 72023000 28465000 43558000 35633 1009 13498 13868 55707;55708 55707 TTYLVLDEADR 11 0 1 Unmodified _TTYLVLDEADR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.3329 2 648.327524 1294.6405 75153.3 0.82285 0.00053347 0.023919 1.5507E-05 0.84677 0.00054898 648.327706551279 653.331865611407 90.665 0.95867 90.665 90.307 91.266 0 312 56 8 0 0 0 0.00106 2 50150 70.399 70.399 1 1.082 0.92779 0 8554400 4209000 4345500 35634 1009 13498 13868 55709;55710 55710 TTYLVLDEADR 11 0 1 Unmodified _TTYLVLDEADR_ 0 0 0 B4DN41;J3KTA4;B5BUE6;P17844;Q7Z2V5;Q59E92;B4DNG2;J3KRZ1;J3QSF1 B4DN41 B4DN41 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.332 2 648.327524 1294.6405 75030.79 0.51153 0.00033164 -0.035835 -2.3233E-05 0.47569 0.00030841 648.327660991108 653.331776307725 90.594 0.88394 90.594 90.284 91.168 0 252 52 7 0 0 0 0.0004486 2 49282 77.662 77.662 1 1.1465 0.95107 0 7773500 3536400 4237100 35635 1009 13498 13868 55711;55712 55712 TVAAPSVFIFPPSDEQLK 18 1 0 Unmodified _TVAAPSVFIFPPSDEQLK_ 0 0 0 Q0KKI6;V9HW34;Q6PJF2;Q7Z3Y4;Q6PIL8;Q6P5S8;Q6GMX0;Q8TCD0;P01834;S6AWD6;S6AWF4;S6BGE9;S6AWD3;S6C4R6;S6B2A1;S6B2C3;S6B294;S6AWE3;Q569I7;Q5EFE6 Q0KKI6 Q0KKI6 HEL-213;IGK@;IGKC Ig kappa chain C region MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 973.5193 2 973.517116 1945.01968 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.91 1 118.91 118.41 119.41 0 0 0 0 0.031039 1 78304 40.113 26.685 1 35636 1439 13499 13869 55713 55713 TVAAPSVFIFPPSDEQLK 18 1 0 Unmodified _TVAAPSVFIFPPSDEQLK_ 0 0 0 Q0KKI6;V9HW34;Q6PJF2;Q7Z3Y4;Q6PIL8;Q6P5S8;Q6GMX0;Q8TCD0;P01834;S6AWD6;S6AWF4;S6BGE9;S6AWD3;S6C4R6;S6B2A1;S6B2C3;S6B294;S6AWE3;Q569I7;Q5EFE6 Q0KKI6 Q0KKI6 HEL-213;IGK@;IGKC Ig kappa chain C region ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 973.5201 2 973.517116 1945.01968 NaN NaN NaN -0.095174 -9.2653E-05 NaN NaN NaN NaN 131.37 0.9445 131.37 130.96 131.9 0 0 0 0 0.045638 1 79052 30.059 21.546 1 NaN NaN 0 1357100 1357100 0 35637 1439 13499 13869 55714 55714 TVAGGAWTYNTTSAVTVK 18 1 0 Unmodified _TVAGGAWTYNTTSAVTVK_ 0 0 0 C9J4Z3;P61513 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 918.4772 2 913.96779 1825.92103 64102.32 0.39069 0.00035708 0.25193 0.00023026 0.64262 0.00058734 913.967975055311 917.975113269796 80.968 1.3544 80.968 80.623 81.977 0 694 116 11 0 0 0 1.553E-16 6 48069 119.01 119.01 1 0.7019 0.80403 0 190570000 109370000 81193000 35638 1129 13500 13870 55715;55716;55717;55718;55719;55720 55718 TVAGGAWTYNTTSAVTVK 18 1 0 Unmodified _TVAGGAWTYNTTSAVTVK_ 0 0 0 C9J4Z3;P61513 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.9759 2 913.96779 1825.92103 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.932 1 81.932 81.432 82.432 0 0 0 0 0.040009 1 48881 38.3 24.873 1 35639 1129 13500 13870 55721 55721 TVAGGAWTYNTTSAVTVK 18 1 0 Unmodified _TVAGGAWTYNTTSAVTVK_ 0 0 0 C9J4Z3;P61513 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 913.9681 2 913.96779 1825.92103 64040.49 0.71619 0.00065458 0.13423 0.00012268 0.85042 0.00077726 914.469475935949 917.974980857398 80.058 1.3929 80.058 79.657 81.05 -7.6294E-06 655 112 10 0 0 0 8.912E-30 4 49046 140.1 140.1 1 0.67306 0.78059 0 218550000 130810000 87740000 35640 1129 13500 13870 55722;55723;55724;55725 55724 TVAGGAWTYNTTSAVTVK 18 1 0 Unmodified _TVAGGAWTYNTTSAVTVK_ 0 0 0 C9J4Z3;P61513 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 917.9758 2 913.96779 1825.92103 63133.18 0.50424 0.00046086 0.22883 0.00020914 0.73307 0.00067 914.469488190723 917.975049253083 93.14 1.9869 93.14 92.696 94.682 -7.6294E-06 785 126 12 0 0 0 9.1393E-06 4 52306 80.632 73.262 1 0.85005 0.73414 0 106730000 58124000 48608000 35641 1129 13500 13870 55726;55727;55728;55729 55728 TVAGGAWTYNTTSAVTVK 18 1 0 Unmodified _TVAGGAWTYNTTSAVTVK_ 0 0 0 C9J4Z3;P61513 C9J4Z3 C9J4Z3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 914.4692 2 913.96779 1825.92103 63918.27 0.28894 0.00026408 0.26258 0.00023999 0.55153 0.00050408 914.469505229831 917.975134707209 93.025 1.8576 93.025 92.628 94.485 0 816 121 12 0 0 0 1.4953E-11 4 50884 101.3 101.3 1 0.82323 0.70224 0 96072000 52328000 43744000 35642 1129 13500 13870 55730;55731;55732;55733 55730 TVAGQDAVIVLLGTR 15 0 1 Unmodified _TVAGQDAVIVLLGTR_ 0 0 0 V9HWI1;P30043;M0QZL1;M0R192 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.9457 2 756.940847 1511.86714 70564.21 0.43012 0.00032557 0.067032 5.0739E-05 0.49715 0.00037631 756.940958420312 761.945073081531 114.43 0.81391 114.43 114.09 114.9 0 267 56 7 0 0 0 8.4103E-06 3 72476 94.191 94.191 1 2.2189 2.2758 0 25852000 7184100 18668000 35643 1528 13501 13871 55734;55735;55736 55735 TVAGQDAVIVLLGTR 15 0 1 Unmodified _TVAGQDAVIVLLGTR_ 0 0 0 V9HWI1;P30043;M0QZL1;M0R192 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.9459 2 756.940847 1511.86714 70549.89 0.5339 0.00040413 -0.0012983 -9.827E-07 0.5326 0.00040314 756.940975731483 761.945013953414 113.82 0.90549 113.82 113.44 114.35 -7.6294E-06 315 65 7 0 0 0 3.8272E-07 4 73768 104.87 92.807 1 2.1688 2.2656 0 22517000 6576000 15941000 35644 1528 13501 13871 55737;55738;55739;55740 55738 TVAGQDAVIVLLGTR 15 0 1 Unmodified _TVAGQDAVIVLLGTR_ 0 0 0 V9HWI1;P30043;M0QZL1;M0R192 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 761.946 2 756.940847 1511.86714 70053.21 1.0152 0.00076842 -0.56248 -0.00042577 0.45269 0.00034266 756.94071176542 761.944674149703 126.11 0.68867 126.11 125.82 126.51 7.6294E-06 137 27 7 0 0 0 0.00022327 1 75724 68.809 68.809 1 1.0529 0.89923 0 5738700 2921500 2817200 35645 1528 13501 13871 55741 55741 TVAGQDAVIVLLGTR 15 0 1 Unmodified _TVAGQDAVIVLLGTR_ 0 0 0 V9HWI1;P30043;M0QZL1;M0R192 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.4471 2 756.940847 1511.86714 70794.18 0.72733 0.00055054 -0.076896 -5.8206E-05 0.65043 0.00049234 756.940933805147 761.944867894079 125.9 0.75781 125.9 125.64 126.4 -7.6294E-06 175 34 7 0 0 0 0.00025627 2 74678 61.375 61.375 1 1.092 0.90726 0 5936900 3191100 2745800 35646 1528 13501 13871 55742;55743 55743 TVALDGTLFQK 11 1 0 Unmodified _TVALDGTLFQK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.8391 2 596.832246 1191.64994 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.78 1 87.78 87.28 88.28 0 0 0 0 0.051828 1 52944 43.282 19.127 1 35647 1739 13502 13872 55744 55744 TVALDGTLFQK 11 1 0 Unmodified _TVALDGTLFQK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.8411 2 596.832246 1191.64994 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.825 1 86.825 86.325 87.325 0 0 0 0 0.022079 1 53522 52.579 21.505 1 35648 1739 13502 13872 55745 55745 TVALWDLR 8 0 1 Unmodified _TVALWDLR_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.2827 2 487.276909 972.539266 86029.3 0.45205 0.00022027 0.3292 0.00016041 0.78125 0.00038069 487.2769511516 492.281126864489 96.678 1.4359 96.678 96.2 97.636 0 539 125 7 0 0 0 0.010329 3 58621 72.485 32.709 1 0.81669 0.94944 0 181440000 95699000 85744000 35649 1771;1695 13503 13873 55746;55747;55748 55746 TVALWDLR 8 0 1 Unmodified _TVALWDLR_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.277 2 487.276909 972.539266 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.02 1 97.02 96.52 97.52 0 0 0 0 0.041054 1 59167 63.565 26.007 1 35650 1771;1695 13503 13873 55749 55749 TVALWDLR 8 0 1 Unmodified _TVALWDLR_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.2766 2 487.276909 972.539266 NaN NaN NaN -0.13057 -6.3623E-05 NaN NaN NaN NaN 95.924 1.8689 95.924 95.221 97.09 0 0 0 0 0.038601 1 60492 59.245 24.437 1 NaN NaN 0 121670000 121670000 0 35651 1771;1695 13503 13873 55750 55750 TVALWDLR 8 0 1 Unmodified _TVALWDLR_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.2813 2 487.276909 972.539266 85964.56 0.34186 0.00016658 0.21763 0.00010604 0.55949 0.00027263 487.276873099104 492.281032877221 109.49 1.9962 109.49 109.11 111.1 -7.6294E-06 390 98 8 0 0 0 0.060276 1 62898 40.002 13.399 1 1.6763 1.38 0 18068000 6484100 11584000 35652 1771;1695 13503 13873 55751 55751 TVALWDLR 8 0 1 Unmodified _TVALWDLR_ 0 0 0 Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0;Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP02 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.2768 2 487.276909 972.539266 86255.61 0.41349 0.00020148 0.085221 4.1526E-05 0.49871 0.00024301 487.276790357766 492.28100619639 109.4 1.952 109.4 108.98 110.93 0 369 98 8 0 0 0 0.014196 2 61934 63.565 22.063 1 1.6335 1.3803 0 18007000 6955700 11051000 35653 1771;1695 13503 13873 55752;55753 55753 TVAPMPPAQDHK 12 1 0 Oxidation (M) _TVAPM(ox)PPAQDHK_ TVAPM(1)PPAQDHK TVAPM(41.54)PPAQDHK 0 1 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;H7C366 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.3312 2 654.324262 1306.63397 NaN NaN NaN -1.1643 -0.00076181 NaN NaN NaN NaN 19.585 0.45063 19.585 19.31 19.76 1.9073E-06 0 0 0 0.016274 1 6056 41.54 14.211 1 NaN NaN 0 3851800 0 3851800 35654 1507 13504 13874 55754 55754 1276 TVAQSQQLETNSQR 14 0 1 Unmodified _TVAQSQQLETNSQR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.4008 2 795.397532 1588.78051 NaN NaN NaN 0.21363 0.00016992 NaN NaN NaN NaN 22.419 0.3642 22.419 22.281 22.646 0 0 0 0 1.0408E-15 1 8471 129.37 91.812 1 NaN NaN 0 5641400 0 5641400 35655 391 13505 13875 55755 55755 TVAQSQQLETNSQR 14 0 1 Unmodified _TVAQSQQLETNSQR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.4001 2 795.397532 1588.78051 68730.07 0.58303 0.00046374 -0.38347 -0.00030501 0.19956 0.00015873 795.397339727112 800.400807816817 22.285 0.40457 22.285 22.158 22.563 0 73 17 7 0 0 0 1.5724E-46 2 8280 180.09 180.09 1 1.0911 1.0937 0 18929000 9183000 9746500 35656 391 13505 13875 55756;55757 55757 TVAQSQQLETNSQR 14 0 1 Unmodified _TVAQSQQLETNSQR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.3979 2 795.397532 1588.78051 69676.23 0.55131 0.00043851 0.11617 9.24E-05 0.66747 0.00053091 795.899184637842 800.40153888543 25.039 0.45505 25.039 24.849 25.304 1.9073E-06 102 22 6 0 0 0 0.030837 1 8941 30.889 28.27 1 0.84622 0.7347 0 2346500 1233800 1112700 35657 391 13505 13875 55758 55758 TVAQSQQLETNSQR 14 0 1 Unmodified _TVAQSQQLETNSQR_ 0 0 0 B4DKE6;Q53HK8;A0A024RDQ8;P40938;Q5U0C2 B4DKE6 B4DKE6 RFC3 Replication factor C subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 800.4031 2 795.397532 1588.78051 69485.14 0.65533 0.00052125 -0.22955 -0.00018259 0.42577 0.00033866 795.397455860811 800.401139180804 25.093 0.39722 25.093 24.95 25.347 0 107 22 6 0 0 0 0.0019644 2 8532 49.929 49.929 1 0.83614 0.7422 0 1926700 1064100 862570 35658 391 13505 13875 55759;55760 55760 TVASTAMNSQSSR 13 0 1 Unmodified _TVASTAMNSQSSR_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.3212 2 670.317165 1338.61978 74081.55 0.26345 0.0001766 0.31649 0.00021215 0.57994 0.00038874 670.317364019104 675.321607134111 22.271 0.28787 22.271 22.125 22.413 0 56 10 8 0 0 0 0.0058324 1 7084 46.88 45.391 1 1.9373 1.6197 0 3605900 1111800 2494100 35659 1803 13506 13876 55761 55761 TVASTAMNSQSSR 13 0 1 Unmodified _TVASTAMNSQSSR_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.317 2 670.317165 1338.61978 74478.06 0.21068 0.00014122 0.12456 8.3493E-05 0.33523 0.00022471 670.317332199138 675.321552850187 22.264 0.3909 22.264 22.069 22.46 0 61 17 6 0 0 0 0.0041837 2 6649 48.741 40.951 1 1.7066 1.4976 0 1853300 676820 1176400 35660 1803 13506 13876 55762;55763 55763 TVAVASGAASTPISISTGAPTVR 23 0 1 Unmodified _TVAVASGAASTPISISTGAPTVR_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1062.5814 2 1057.57622 2113.1379 61019.41 0.31436 0.00033246 0.27189 0.00028755 0.58626 0.00062001 1057.57670320826 1062.58080627787 107.25 0.32998 107.25 107.08 107.41 0 46 18 5 0 0 0 0.003149 1 61399 28.546 28.546 1 1.5549 1.3184 0 2917800 1473700 1444000 35661 135 13507 13877 55764 55764 TVAVIGGISR 10 0 1 Unmodified _TVAVIGGISR_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 491.7992 2 486.795466 971.57638 88765.91 0.10398 5.0618E-05 -0.26157 -0.00012733 -0.15759 -7.6713E-05 486.795428966689 491.79936160008 61.269 0.95196 61.269 60.926 61.878 0 233 70 5 0 0 0 0.0043374 1 35048 61.65 27.397 1 0.91615 0.94943 0 20528000 12886000 7642500 35662 63 13508 13878 55765 55765 TVAVIGGISR 10 0 1 Unmodified _TVAVIGGISR_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.8 2 486.795466 971.57638 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.049 1 60.049 59.549 60.549 0 0 0 0 0.035902 1 35003 48.44 17.366 1 35663 63 13508 13878 55766 55766 TVAVIGGISR 10 0 1 Unmodified _TVAVIGGISR_ 0 0 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.7999 2 486.795466 971.57638 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.875 1 70.875 70.375 71.375 0 0 0 0 0.051383 1 36480 44.203 21.463 1 35664 63 13508 13878 55767 55767 TVAVWDSETGER 12 0 1 Unmodified _TVAVWDSETGER_ 0 0 0 B2R9I9;A0MNP2;Q96DI7 B2R9I9 B2R9I9 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.3207 2 675.320231 1348.62591 76900.12 0.53675 0.00036248 0.31662 0.00021382 0.85337 0.0005763 675.320736329498 680.32421877252 64.691 0.62692 64.691 64.377 65.004 0 124 43 4 0 0 0 0.005312 2 33365 51.268 42.735 1 0.84498 0.73618 0 1896800 1024300 872450 35665 643 13509 13879 55768;55769 55769 TVCAEYAIALALR 13 0 1 Unmodified _TVCAEYAIALALR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 725.892 2 725.889769 1449.76499 NaN NaN NaN -0.15794 -0.00011465 NaN NaN NaN NaN 125.87 0.65351 125.87 125.64 126.3 7.6294E-06 0 0 0 0.0044591 2 75653 61.353 50.189 1 NaN NaN 0 1289400 1289400 0 35666 1563 13510 13880 55770;55771 55770 TVCAEYAIALALR 13 0 1 Unmodified _TVCAEYAIALALR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 725.8768 2 725.889769 1449.76499 NaN NaN NaN 1.3373 0.00097074 NaN NaN NaN NaN 125.65 0.57025 125.65 125.45 126.02 0 0 0 0 0.0052574 2 74516 58.37 40.052 1 NaN NaN 0 764010 764010 0 35667 1563 13510 13880 55772;55773 55772 TVDFTQDSNYLLTGGQDK 18 1 0 Unmodified _TVDFTQDSNYLLTGGQDK_ 0 0 0 Q9Y3F4;B0AZV0 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1005.9843 2 1001.47363 2000.93271 61096.91 0.7161 0.00071715 -0.19593 -0.00019622 0.52016 0.00052093 1001.97512843844 1005.48057299958 97.169 0.88678 97.169 96.786 97.672 0 244 69 6 0 0 0 2.0965E-05 1 60404 65.805 65.805 1 3.9262 4.237 0 21816000 5735300 16081000 35668 2136 13511 13881 55774 55774 TVDSQGPTPVCTPTFLER 18 0 1 Unmodified _TVDSQGPTPVCTPTFLER_ 0 0 0 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1003.4905 2 1002.9884 2003.96224 60576.68 0.79912 0.00080151 -0.14365 -0.00014408 0.65547 0.00065743 1003.48995486916 1007.9925495101 93.114 0.83409 93.114 92.764 93.598 0 458 70 8 0 0 0 2.5967E-17 2 56315 148.91 141.3 1 1.0623 1.1765 0 63024000 31371000 31653000 35669 2019 13512 13882 55775;55776 55775 TVDSQGPTPVCTPTFLER 18 0 1 Unmodified _TVDSQGPTPVCTPTFLER_ 0 0 0 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1007.994 2 1002.9884 2003.96224 60803.01 0.47317 0.00047458 -0.092619 -9.2896E-05 0.38055 0.00038169 1003.4900186735 1008.49386583284 92.522 0.72079 92.522 92.128 92.848 7.6294E-06 332 59 7 0 0 0 1.0765E-08 2 57106 98.942 86.674 1 1.0968 1.2486 0 110190000 58402000 51790000 35670 2019 13512 13882 55777;55778 55777 TVDSQGPTPVCTPTFLER 18 0 1 Unmodified _TVDSQGPTPVCTPTFLER_ 0 0 0 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1003.4901 2 1002.9884 2003.96224 59926.58 0.36468 0.00036577 -0.13711 -0.00013752 0.22757 0.00022825 1003.48994081312 1007.99261162935 106.35 0.84895 106.35 106.02 106.87 0 348 47 10 0 0 0 1.2802E-05 2 60671 91.812 83.901 1 1.1414 0.98026 0 43260000 20029000 23231000 35671 2019 13512 13882 55779;55780 55780 TVDSQGPTPVCTPTFLER 18 0 1 Unmodified _TVDSQGPTPVCTPTFLER_ 0 0 0 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1003.4886 2 1002.9884 2003.96224 60229.84 0.28273 0.00028358 -0.013965 -1.4006E-05 0.26877 0.00026957 1003.49001244564 1007.99276277696 106.23 0.91967 106.23 105.85 106.77 0 397 55 10 0 0 0 2.871E-05 2 59674 86.498 78.587 1 1.1218 0.97881 0 57109000 27039000 30070000 35672 2019 13512 13882 55781;55782 55782 TVEELLETGLIQVATK 16 1 0 Unmodified _TVEELLETGLIQVATK_ 0 0 0 A0A024R663;Q86UP2;G3V4Y7;H0YJZ8 A0A024R663 A0A024R663 KTN1 Kinectin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.4911 2 872.490567 1742.96658 NaN NaN NaN 0.44302 0.00038653 NaN NaN NaN NaN 126.76 0.45412 126.76 126.59 127.05 0 0 0 0 0.0019891 1 82471 79.82 63.188 1 NaN NaN 0 1779500 1779500 0 35673 197 13513 13883 55783 55783 TVEFQHIIPISAVTGEGIEELK 22 1 0 Unmodified _TVEFQHIIPISAVTGEGIEELK_ 0 0 0 A4D1E9 A4D1E9 A4D1E9 GTPBP10 GTP-binding protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.4363 3 804.100324 2409.27914 69827.88 0.58292 0.00046872 -0.37507 -0.00030159 0.20785 0.00016713 804.434604572421 807.105550762597 118.54 0.45168 118.54 118.31 118.77 -7.6294E-06 87 27 5 0 0 0 0.0006279 1 77997 32.337 32.337 1 0.64607 0.67519 0 10151000 5285300 4865500 35674 663 13514 13884 55784 55784 TVEFQHIIPISAVTGEGIEELK 22 1 0 Unmodified _TVEFQHIIPISAVTGEGIEELK_ 0 0 0 A4D1E9 A4D1E9 A4D1E9 GTPBP10 GTP-binding protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.4358 3 804.100324 2409.27914 69694.53 0.615 0.00049453 0.87844 0.00070635 1.4934 0.0012009 804.435095053129 807.106313443121 130.98 0.38351 130.98 130.82 131.2 0 70 16 7 0 0 0 0.047738 2 79461 10.689 10.689 1 0.44468 0.34748 0 3817000 2309800 1507200 35675 663 13514 13884 55785;55786 55785 TVEFQHIIPISAVTGEGIEELK 22 1 0 Unmodified _TVEFQHIIPISAVTGEGIEELK_ 0 0 0 A4D1E9 A4D1E9 A4D1E9 GTPBP10 GTP-binding protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.7732 3 804.100324 2409.27914 72190.83 0.88277 0.00070984 0.23147 0.00018613 1.1142 0.00089596 804.434997644126 807.106182208757 130.76 0.4006 130.76 130.58 130.98 0 67 17 7 0 0 0 0.0012344 3 78358 27.739 27.739 1 0.64655 0.52619 0 6965100 3660400 3304700 35676 663 13514 13884 55787;55788;55789 55787 TVEGEFTGVGK 11 1 0 Unmodified _TVEGEFTGVGK_ 0 0 0 Q5T280 Q5T280 Q5T280 C9orf114 Putative methyltransferase C9orf114 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.2851 2 562.285128 1122.5557 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.673 1 47.673 47.173 48.173 0 0 0 0 0.038665 1 25890 54.416 27.814 1 35677 1819 13515 13885 55790 55790 TVEICPFSFDSR 12 0 1 Unmodified _TVEICPFSFDSR_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.842 2 729.340109 1456.66566 71245.02 1.0435 0.00076108 -0.10255 -7.4791E-05 0.94097 0.00068629 729.340033815132 734.343767662883 102.41 0.73201 102.41 102 102.73 -7.6294E-06 227 56 6 0 0 0 0.0002099 1 64513 80.763 80.763 1 0.59795 0.59173 0 15382000 9293400 6088700 35678 1837 13516 13886 55791 55791 TVEICPFSFDSR 12 0 1 Unmodified _TVEICPFSFDSR_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.3402 2 729.340109 1456.66566 70145.72 0.86795 0.00063303 -0.042044 -3.0664E-05 0.8259 0.00060236 729.340173142646 734.344347053663 114.84 0.87596 114.84 114.57 115.45 0 228 39 9 0 0 0 1.3787E-05 2 67136 106.29 106.29 1 1.2755 1.0439 0 13330000 5955100 7374500 35679 1837 13516 13886 55792;55793 55793 TVEICPFSFDSR 12 0 1 Unmodified _TVEICPFSFDSR_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.3405 2 729.340109 1456.66566 70784.6 0.75236 0.00054872 -0.071017 -5.1795E-05 0.68134 0.00049693 729.34020417883 734.344221639388 114.75 0.81459 114.75 114.48 115.29 0 219 37 9 0 0 0 3.0918E-08 2 66156 118.4 118.4 1 1.2899 1.0571 0 13511000 5901600 7609400 35680 1837 13516 13886 55794;55795 55795 TVELPLNK 8 1 0 Unmodified _TVELPLNK_ 0 0 0 Q9BVJ6;B4E343;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 461.278 2 457.271293 912.528032 91576.3 0.0063837 2.9191E-06 -0.30349 -0.00013878 -0.2971 -0.00013586 457.270995440088 461.278153724614 69.759 0.88058 69.759 69.328 70.208 0 217 67 5 0 0 0 0.034605 1 35846 49.358 16.888 1 1.4994 1.2304 0 5159400 1970400 3189000 35681 2008 13517 13887 55796 55796 TVEPLEYYR 9 0 1 Unmodified _TVEPLEYYR_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.2957 2 585.295496 1168.57644 79009.19 0.43219 0.00025296 0.57492 0.0003365 1.0071 0.00058946 585.295557397479 590.299765090916 68.706 1.0968 68.706 68.332 69.428 0 260 96 5 0 0 0 0.0031039 1 39905 81.548 66.397 1 0.64112 0.665 0 22691000 12043000 10648000 35682 1959 13518 13888 55797 55797 TVEPLEYYR 9 0 1 Unmodified _TVEPLEYYR_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.2958 2 585.295496 1168.57644 77119.77 0.59293 0.00034704 0.028808 1.6861E-05 0.62174 0.0003639 585.295245744547 590.299657171726 67.484 1.0195 67.484 67.088 68.107 0 193 85 5 0 0 0 0.0031039 1 39825 81.548 66.397 1 0.7215 0.7901 0 32242000 19472000 12770000 35683 1959 13518 13888 55798 55798 TVEPLEYYR 9 0 1 Unmodified _TVEPLEYYR_ 0 0 0 Q96B26;Q5JXM0 Q96B26 Q96B26 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 585.2962 2 585.295496 1168.57644 74211.14 0.51102 0.0002991 1.3059 0.00076436 1.817 0.0010635 585.297023231971 590.299783695444 78.548 0.94942 78.548 78.166 79.115 0 199 59 5 0 0 0 0.051194 1 42283 44.349 28.687 1 0.7523 0.63839 0 5149800 2565000 2584800 35684 1959 13518 13888 55799 55799 TVESEAASYLDQISR 15 0 1 Unmodified _TVESEAASYLDQISR_ 0 0 0 K7ENH2;B3KQ25;K7ESG5;K9J957;V9HWJ8;Q6FHK7;A0A024R203;P61289;J7FRP4;A0A087WTV2 K7ENH2 K7ENH2 PSME3;HEL-S-283 Proteasome activator complex subunit 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.3937 2 834.907399 1667.80024 66268.92 0.17499 0.0001461 1.1081 0.00092515 1.2831 0.0010713 834.908766250273 839.912341791079 103.48 0.45908 103.48 103.29 103.75 0 120 38 4 0 0 0 0.013716 1 65466 49.448 43.208 1 1.0641 1.0744 0 10176000 5021200 5154400 35685 99 13519 13889 55800 55800 TVETVEGGGLVVILLR 16 0 1 Unmodified _TVETVEGGGLVVILLR_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.9949 2 827.990537 1653.96652 NaN NaN NaN 0.034076 2.8215E-05 NaN NaN NaN NaN 133.28 0.16333 133.28 133.19 133.35 0 0 0 0 0.038606 1 87280 37.18 29.8 1 NaN NaN 0 4302900 0 4302900 35686 2023;1687 13520 13890 55801 55801 TVETVEGGGLVVILLR 16 0 1 Unmodified _TVETVEGGGLVVILLR_ 0 0 0 Q05CW7;E9PMU0;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.9919 2 827.990537 1653.96652 NaN NaN NaN 1.0776 0.00089221 NaN NaN NaN NaN 133.24 0.14368 133.24 133.16 133.3 0 0 0 0 0.0034464 1 89483 56.359 48.979 1 NaN NaN 0 7816100 7816100 0 35687 2023;1687 13520 13890 55802 55802 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;H7C422;H7C3M2;B5MCW2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.8938 3 479.222253 1434.64493 85575.1 0.094923 4.5489E-05 -0.050719 -2.4306E-05 0.044205 2.1184E-05 479.222329630014 481.893629824934 39.459 1.1235 39.459 39.246 40.37 3.8147E-06 596 93 10 0 0 0 0.00016358 2 20387 69.602 50.207 1 0.89463 1.047 0 287330000 148260000 139070000 35688 1554;936 13521 13891 55803;55804 55803 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;H7C422;H7C3M2;B5MCW2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.3394 2 718.329741 1434.64493 68295.76 0.66353 0.00047663 -0.082933 -5.9573E-05 0.58059 0.00041706 718.329853262479 722.336802791124 39.437 1.0147 39.437 39.26 40.274 0 534 84 9 0 0 0 1.194E-48 3 20402 248.68 193.62 1 0.90994 1.0739 0 358810000 183910000 174910000 35689 1554;936 13521 13891 55805;55806;55807 55805 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;H7C422;H7C3M2;B5MCW2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2224 3 479.222253 1434.64493 85532.3 0.051274 2.4572E-05 0.12708 6.0899E-05 0.17835 8.547E-05 479.222385919431 481.893693551825 38.318 1.1648 38.318 37.985 39.149 0 600 97 10 0 0 0 7.346E-06 3 19985 101.6 74.969 1 0.88097 1.0369 0 412370000 230920000 181450000 35690 1554;936 13521 13891 55808;55809;55810 55809 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;H7C422;H7C3M2;B5MCW2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.3375 2 718.329741 1434.64493 68722.93 0.57781 0.00041506 -0.067239 -4.8299E-05 0.51058 0.00036676 718.329825974444 722.336914222513 38.282 1.0981 38.282 37.985 39.083 0 550 91 9 0 0 0 6.0104E-30 3 20067 184.24 138.24 1 0.85949 1.0122 0 484960000 248890000 236070000 35691 1554;936 13521 13891 55811;55812;55813 55812 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;H7C422;H7C3M2;B5MCW2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 722.3369 2 718.329741 1434.64493 70129.52 0.61336 0.00044059 -0.096383 -6.9235E-05 0.51697 0.00037136 718.329789155463 722.336856950954 45.356 1.6962 45.356 44.983 46.68 0 741 117 10 0 0 0 1.1434E-05 3 21555 108.7 83.842 1 1.0454 0.89478 0 72118000 35317000 36801000 35692 1554;936 13521 13891 55814;55815;55816 55814 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;H7C422;H7C3M2;B5MCW2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.8937 3 479.222253 1434.64493 84721.96 0.11918 5.7115E-05 -0.18632 -8.929E-05 -0.067139 -3.2175E-05 479.222270277795 481.89355973431 45.342 1.6041 45.342 45.055 46.659 0 714 115 10 0 0 0 0.0016418 2 21563 51.211 32.153 1 1.0016 0.82081 0 36175000 17409000 18766000 35693 1554;936 13521 13891 55817;55818 55817 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;H7C422;H7C3M2;B5MCW2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 722.3369 2 718.329741 1434.64493 69508.5 0.80597 0.00057895 -0.36785 -0.00026424 0.43812 0.00031471 718.329621809006 722.336633961793 45.43 1.9172 45.43 44.968 46.885 0 758 123 10 0 0 0 0.00019002 3 21484 88.596 64.578 1 1.0384 0.86659 0 42224000 20562000 21662000 35694 1554;936 13521 13891 55819;55820;55821 55821 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;H7C422;H7C3M2;B5MCW2;B4DN06;F8WCR1;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 479.2222 3 479.222253 1434.64493 85040.69 0.45725 0.00021912 -0.53246 -0.00025517 -0.075215 -3.6045E-05 479.222062445722 481.893414057422 45.44 1.7914 45.44 45.006 46.798 3.8147E-06 677 115 10 0 0 0 0.001309 2 21042 53.967 34.226 1 1.0373 0.83728 0 23393000 11001000 12392000 35695 1554;936 13521 13891 55822;55823 55823 TVFHEEFIHYLK 12 1 0 Unmodified _TVFHEEFIHYLK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.605 3 521.604915 1561.79291 83081.13 0.37599 0.00019612 -0.051995 -2.7121E-05 0.324 0.000169 521.939283665912 524.276176358129 91.496 1.4489 91.496 91.266 92.714 0 453 90 8 0 0 0 0.0051404 3 50796 34.685 34.685 1 1.6523 1.2829 0 14618000 5051000 9567400 35696 1995 13522 13892 55824;55825;55826 55825 TVFHEEFIHYLK 12 1 0 Unmodified _TVFHEEFIHYLK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.6049 3 521.604915 1561.79291 83044.44 0.25079 0.00013081 -0.36526 -0.00019052 -0.11447 -5.9709E-05 521.604731673528 524.275975332509 90.905 1.5853 90.906 90.648 92.234 7.6294E-06 457 98 9 0 0 0 9.1591E-05 2 49632 66.498 66.498 1 1.6238 1.3044 0 15639000 5773500 9865800 35697 1995 13522 13892 55827;55828 55828 TVFRPPLDIYDVLIR 15 0 2 Unmodified _TVFRPPLDIYDVLIR_ 0 0 1 Q9H6R4;B4DF80;B3KPN5;A0A0C4DFX0 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.0209 3 606.348845 1816.02471 77511.88 0.72382 0.00043889 -0.092786 -5.6261E-05 0.63104 0.00038263 606.683072155028 613.020924755127 128.23 1.8816 128.23 126.91 128.79 0 521 117 7 0 0 0 0.00015509 5 83953 59.673 59.673 1 1.0466 1.1304 0 19129000 9743100 9386200 35698 2038 13523 13893 55829;55830;55831;55832;55833 55833 TVFRPPLDIYDVLIR 15 0 2 Unmodified _TVFRPPLDIYDVLIR_ 0 0 1 Q9H6R4;B4DF80;B3KPN5;A0A0C4DFX0 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.3491 3 606.348845 1816.02471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.96 1 128.96 128.46 129.46 0 0 0 0 0.0060534 1 84108 45.864 27.947 1 35699 2038 13523 13893 55834 55834 TVFRPPLDIYDVLIR 15 0 2 Unmodified _TVFRPPLDIYDVLIR_ 0 0 1 Q9H6R4;B4DF80;B3KPN5;A0A0C4DFX0 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.6834 3 606.348845 1816.02471 78189.08 0.77966 0.00047275 -0.066263 -4.0178E-05 0.7134 0.00043257 606.348791780534 613.020831035132 127.37 2.3054 127.37 126.03 128.34 0 765 143 8 0 0 0 7.9814E-05 3 84605 78.069 78.069 1 1.0042 1.1216 0 25911000 12251000 13659000 35700 2038 13523 13893 55835;55836;55837 55835 TVFRPPLDIYDVLIR 15 0 2 Unmodified _TVFRPPLDIYDVLIR_ 0 0 1 Q9H6R4;B4DF80;B3KPN5;A0A0C4DFX0 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.3558 3 606.348845 1816.02471 77185.06 0.65705 0.0003984 0.3268 0.00019815 0.98385 0.00059656 606.34911385851 613.021132961331 134.57 0.24689 134.57 134.45 134.7 0 43 7 10 0 0 0 4.7678E-05 2 82200 82.259 82.259 1 1.496 1.1879 0 107430000 43376000 64054000 35701 2038 13523 13893 55838;55839 55838 TVFRPPLDIYDVLIR 15 0 2 Unmodified _TVFRPPLDIYDVLIR_ 0 0 1 Q9H6R4;B4DF80;B3KPN5;A0A0C4DFX0 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.0213 3 606.348845 1816.02471 76907.57 0.59823 0.00036274 0.034636 2.1002E-05 0.63287 0.00038374 606.349010986448 613.020946647051 134.52 0.23889 134.52 134.39 134.63 0 39 7 8 0 0 0 0.00010325 2 81270 69.331 69.331 1 1.2695 1.1955 0 64144000 27481000 36663000 35702 2038 13523 13893 55840;55841 55840 TVFSPTLPAAR 11 0 1 Unmodified _TVFSPTLPAAR_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4;Q05DV5 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.7977 2 580.327131 1158.63971 82599.54 0.35626 0.00020675 0.24708 0.00014338 0.60334 0.00035013 580.326997983823 585.331213928872 78.366 0.69926 78.366 78.122 78.821 0 181 59 6 0 0 0 0.028617 1 47488 59.931 25.678 1 1.4752 1.4545 0 14719000 6750900 7968500 35703 1873 13524 13894 55842 55842 TVGALQVLGTEAQSSLLK 18 1 0 Unmodified _TVGALQVLGTEAQSSLLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 908.5167 2 908.014741 1814.01493 64772.32 0.68756 0.00062431 -0.15762 -0.00014312 0.52994 0.00048119 908.014513087316 912.021624462196 116.11 1.259 116.11 115.85 117.11 7.6294E-06 400 82 8 0 0 0 2.5526E-107 3 73967 214.23 214.23 1 0.62204 0.68407 0 54525000 31952000 22573000 35704 1665 13525 13895 55843;55844;55845 55844 TVGALQVLGTEAQSSLLK 18 1 0 Unmodified _TVGALQVLGTEAQSSLLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 912.0237 2 908.014741 1814.01493 64449.36 0.80666 0.00073246 -0.18989 -0.00017243 0.61677 0.00056004 908.014497254032 912.021573289704 115.61 1.1332 115.61 115.33 116.47 0 432 73 9 0 0 0 6.0613E-23 3 75287 136.3 136.3 1 0.65372 0.73478 0 73279000 44060000 29219000 35705 1665 13525 13895 55846;55847;55848 55847 TVGALQVLGTEAQSSLLK 18 1 0 Unmodified _TVGALQVLGTEAQSSLLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 908.0138 2 908.014741 1814.01493 64454.36 0.94938 0.00086205 -0.16098 -0.00014617 0.7884 0.00071588 908.014553989783 912.021675089081 128.36 1.4612 128.36 128.06 129.52 0 392 65 10 0 0 0 8.7691E-64 3 77394 180.84 180.84 1 0.33471 0.27227 0 30113000 22917000 7196000 35706 1665 13525 13895 55849;55850;55851 55849 TVGALQVLGTEAQSSLLK 18 1 0 Unmodified _TVGALQVLGTEAQSSLLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 908.5176 2 908.014741 1814.01493 64638.29 0.60491 0.00054926 0.094748 8.6033E-05 0.69966 0.0006353 908.014713722998 912.022013203796 128.15 1.4557 128.15 127.82 129.27 0 359 60 9 0 0 0 2.699E-05 3 76302 68.277 68.277 1 0.32608 0.27017 0 34444000 25802000 8642600 35707 1665 13525 13895 55852;55853;55854 55852 TVGATALPR 9 0 1 Unmodified _TVGATALPR_ 0 0 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.2641 2 443.261259 884.507966 NaN NaN NaN -1.2615 -0.00055919 NaN NaN NaN NaN 36.904 0.34465 36.904 36.824 37.169 0 0 0 0 0.020367 1 19099 58.596 24.593 1 NaN NaN 0 6964100 0 6964100 35708 1592 13526 13896 55855 55855 TVGQLYK 7 1 0 Unmodified _TVGQLYK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;P35580;Q7Z406;M0QY43;B3KWH4 A0A024R1N1;P35580;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH10;MYH14 Myosin-9;Myosin-11;Myosin-10;Myosin-14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.7386 2 404.731803 807.449054 NaN NaN NaN 0.25531 0.00010333 NaN NaN NaN NaN 29.117 0.61551 29.117 28.96 29.575 0 0 0 0 0.03268 1 13977 77.374 20.864 1 NaN NaN 0 98810000 0 98810000 35709 81;1544;1875 13527 13897 55856 55856 TVGQLYK 7 1 0 Unmodified _TVGQLYK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;P35580;Q7Z406;M0QY43;B3KWH4 A0A024R1N1;P35580;Q7Z406 A0A024R1N1 MYH9;MYH11;MYH10;MYH14 Myosin-9;Myosin-11;Myosin-10;Myosin-14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 404.7315 2 404.731803 807.449054 96558.08 0.086866 3.5158E-05 0.2803 0.00011345 0.36717 0.0001486 404.731724457556 408.738957014057 28.325 0.59051 28.325 28.13 28.72 0 183 43 6 0 0 0 0.026905 1 13519 82.263 32.143 1 1.5514 1.7399 0 113720000 44059000 69660000 35710 81;1544;1875 13527 13897 55857 55857 TVGVEPAADGK 11 1 0 Unmodified _TVGVEPAADGK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.2717 2 522.272021 1042.52949 84172.02 0.11814 6.1701E-05 0.046311 2.4187E-05 0.16445 8.5888E-05 522.272062564017 526.279081529996 24.691 0.85427 24.691 24.42 25.274 1.9073E-06 216 39 10 0 0 0 6.7712E-06 2 10309 127.76 102.03 1 0.91728 1.0725 0 282020000 150420000 131600000 35711 1572 13528 13898 55858;55859 55859 TVGVEPAADGK 11 1 0 Unmodified _TVGVEPAADGK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.2793 2 522.272021 1042.52949 84122.68 0.22039 0.00011511 -0.12301 -6.4245E-05 0.097384 5.0861E-05 522.271955138048 526.279061491895 24.467 0.88582 24.467 24.176 25.062 1.9073E-06 214 39 9 0 0 0 1.0592E-08 2 10123 123.75 99.594 1 0.93261 1.0928 0 317050000 167100000 149950000 35712 1572 13528 13898 55860;55861 55860 TVGVEPAADGK 11 1 0 Unmodified _TVGVEPAADGK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.2723 2 522.272021 1042.52949 82655 0.23224 0.00012129 -0.221 -0.00011542 0.011245 5.8727E-06 522.271981789946 526.279039258291 27.036 0.87219 27.036 26.742 27.615 0 221 42 8 0 0 0 0.001903 2 10366 69.275 52.499 1 1.0077 0.78198 0 14297000 6936800 7360400 35713 1572 13528 13898 55862;55863 55863 TVGVEPAADGK 11 1 0 Unmodified _TVGVEPAADGK_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 526.2791 2 522.272021 1042.52949 84120.9 0.029099 1.5197E-05 -0.10505 -5.4866E-05 -0.075954 -3.9669E-05 522.272035477469 526.279087283412 27.07 0.91904 27.07 26.844 27.763 0 186 37 10 0 0 0 0.018885 2 9828 44.57 27.184 1 0.93108 0.7666 0 10469000 5538400 4930500 35714 1572 13528 13898 55864;55865 55864 TVIESSPESPVTITEPYR 18 0 1 Unmodified _TVIESSPESPVTITEPYR_ 0 0 0 B7ZLC9;Q8TEQ6;Q58EZ8 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1008.0126 2 1003.00985 2004.00515 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.267 1 91.267 90.767 91.767 -7.6294E-06 0 0 0 2.5634E-05 1 55224 72.705 48.009 1 35715 1114 13529 13899 55866 55866 TVIESSPESPVTITEPYR 18 0 1 Unmodified _TVIESSPESPVTITEPYR_ 0 0 0 B7ZLC9;Q8TEQ6;Q58EZ8 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1008.0145 2 1003.00985 2004.00515 NaN NaN NaN -2.0026 -0.0020087 NaN NaN NaN NaN 90.543 0.24066 90.543 90.428 90.669 7.6294E-06 0 0 0 0.00044204 2 55946 60.157 48.238 1 NaN NaN 0 4724300 0 4724300 35716 1114 13529 13899 55867;55868 55868 TVIESSPESPVTITEPYR 18 0 1 Unmodified _TVIESSPESPVTITEPYR_ 0 0 0 B7ZLC9;Q8TEQ6;Q58EZ8 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1003.0089 2 1003.00985 2004.00515 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.618 1 90.618 90.118 91.118 0 0 0 0 0.0038182 1 56034 51.841 30.54 1 35717 1114 13529 13899 55869 55869 TVINFTMPNTIK 12 1 0 Oxidation (M) _TVINFTM(ox)PNTIK_ TVINFTM(1)PNTIK TVINFTM(96.96)PNTIK 0 1 0 B3GQE6;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.8782 2 697.871045 1393.72754 72633.68 0.49146 0.00034297 -0.22403 -0.00015634 0.26743 0.00018663 697.871023778785 701.877823004144 81.613 0.97524 81.613 81.157 82.132 0 330 84 6 0 0 0 3.8808E-05 2 48578 96.957 96.957 1 1.3255 1.489 0 69089000 29438000 39651000 35718 899;1099 13530 13900 55870;55871 55870 723 TVINFTMPNTIK 12 1 0 Oxidation (M) _TVINFTM(ox)PNTIK_ TVINFTM(1)PNTIK TVINFTM(50.28)PNTIK 0 1 0 B3GQE6;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.8713 2 697.871045 1393.72754 NaN NaN NaN -0.12553 -8.7607E-05 NaN NaN NaN NaN 93.516 0.84985 93.516 93.219 94.069 0 0 0 0 0.0070313 1 52144 50.284 31.013 1 NaN NaN 0 3548700 3548700 0 35719 899;1099 13530 13900 55872 55872 723 TVINFTMPNTIK 12 1 0 Unmodified _TVINFTMPNTIK_ 0 0 0 B3GQE6;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.8801 2 689.873588 1377.73262 72344.93 0.74299 0.00051257 -1.1784 -0.00081295 -0.43541 -0.00030038 689.873580811777 693.879403851018 114.67 0.66214 114.67 114.48 115.14 0 112 31 6 0 0 0 0.00095797 3 67062 63.283 63.283 1 2.4799 1.9781 0 6857500 1748300 5109200 35720 899;1099 13530 13901 55873;55874;55875 55875 TVITPDPNLSIDQVGVPR 18 0 1 Unmodified _TVITPDPNLSIDQVGVPR_ 0 0 0 P24928;A0A087WWE2 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.0273 2 961.023097 1920.03164 65218.46 0.32345 0.00031084 0.4921 0.00047291 0.81554 0.00078376 961.524408193206 966.028105456952 108.17 0.31799 108.17 108.03 108.34 -7.6294E-06 73 23 4 0 0 0 0.00068444 2 67451 42.095 42.095 1 1.1008 1.1539 0 10975000 6047800 4927500 35721 1514 13531 13902 55876;55877 55876 TVITPDPNLSIDQVGVPR 18 0 1 Unmodified _TVITPDPNLSIDQVGVPR_ 0 0 0 P24928;A0A087WWE2 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.0281 2 961.023097 1920.03164 64592.46 0.52301 0.00050262 -0.33478 -0.00032174 0.18822 0.00018089 961.524005859045 966.528944487911 107.63 0.38606 107.63 107.49 107.87 -7.6294E-06 96 27 7 0 0 0 5.6332E-05 1 68754 56.122 56.122 1 0.8019 0.80993 0 9470700 5534400 3936400 35722 1514 13531 13902 55878 55878 TVIVAALDGTFQR 13 0 1 Unmodified _TVIVAALDGTFQR_ 0 0 0 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3;K7ES52;K7ERJ1 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8928 2 695.888084 1389.76161 75807.74 0.46528 0.00032378 0.27395 0.00019064 0.73923 0.00051442 695.888522988712 700.892326069738 102.67 0.92621 102.67 102.23 103.15 0 327 78 6 0 0 0 7.6128E-06 1 63136 103.08 84.411 1 2.2786 2.3409 0 19459000 7022000 12437000 35723 252 13532 13903 55879 55879 TVIVAALDGTFQR 13 0 1 Unmodified _TVIVAALDGTFQR_ 0 0 0 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3;K7ES52;K7ERJ1 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8927 2 695.888084 1389.76161 73031.98 0.55171 0.00038393 0.21128 0.00014703 0.76299 0.00053095 696.389628329285 700.892229084082 101.92 0.76408 101.92 101.55 102.32 0 248 58 7 0 0 0 4.4689E-06 1 64071 107.06 82.966 1 2.1539 2.4612 0 50387000 17282000 33105000 35724 252 13532 13903 55880 55880 TVIVAALDGTFQR 13 0 1 Unmodified _TVIVAALDGTFQR_ 0 0 0 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3;K7ES52;K7ERJ1 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.8939 2 695.888084 1389.76161 75995.64 0.65263 0.00045416 1.2704 0.00088404 1.923 0.0013382 695.888185639557 700.892960760226 114.53 0.72003 114.53 114.24 114.96 7.6294E-06 131 31 7 0 0 0 0.0020343 1 66082 55.401 32.081 1 0.87962 0.7776 0 3832200 2549600 1282600 35725 252 13532 13903 55881 55881 TVLAAAYGEK 10 1 0 Unmodified _TVLAAAYGEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;B4E263;B3KWS1;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.7867 2 511.779482 1021.54441 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.505 1 44.505 44.005 45.005 0 0 0 0 0.0085409 1 23915 59.426 16.18 1 35726 897 13533 13904 55882 55882 TVLAAAYGEK 10 1 0 Unmodified _TVLAAAYGEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;B4E263;B3KWS1;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.7881 2 511.779482 1021.54441 86726.04 1.1761 0.00060193 -0.27789 -0.00014222 0.89826 0.00045971 511.779156572046 515.786340278566 43.712 0.90974 43.712 43.299 44.209 0 295 75 6 0 0 0 0.0021508 2 23840 70.399 34.003 1 0.92455 1.0415 0 123350000 60294000 63056000 35727 897 13533 13904 55883;55884 55884 TVLAAAYGEK 10 1 0 Unmodified _TVLAAAYGEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;B4E263;B3KWS1;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.7794 2 511.779482 1021.54441 84689.81 0.19427 9.9424E-05 0.1585 8.1117E-05 0.35277 0.00018054 511.779420772945 515.786480386189 51.273 0.97861 51.273 50.887 51.865 0 327 69 8 0 0 0 0.010458 2 25180 53.327 20.487 1 1.2226 0.95899 0 11429000 4852000 6576800 35728 897 13533 13904 55885;55886 55886 TVLAAAYGEK 10 1 0 Unmodified _TVLAAAYGEK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;B4E263;B3KWS1;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.7866 2 511.779482 1021.54441 85409.38 0.14408 7.3735E-05 0.43894 0.00022464 0.58301 0.00029837 511.779552398387 515.786593728342 51.549 1.2097 51.549 51.126 52.336 0 342 86 6 0 0 0 0.0109 2 24724 52.725 29.297 1 1.2879 1.0584 0 9700400 4466600 5233800 35729 897 13533 13904 55887;55888 55887 TVLCGTCGQPADK 13 1 0 Unmodified _TVLCGTCGQPADK_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.8303 2 703.823769 1405.63298 71097.02 0.7018 0.00049394 -0.39745 -0.00027973 0.30435 0.00021421 703.823807016577 707.830828187217 27.943 0.64463 27.943 27.746 28.39 0 257 43 9 0 0 0 1.8589E-13 2 12951 130.01 126.89 1 1.2382 1.4036 0 96956000 38958000 57997000 35730 1440 13534 13905 55889;55890 55889 TVLCGTCGQPADK 13 1 0 Unmodified _TVLCGTCGQPADK_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.8316 2 703.823769 1405.63298 70650.3 0.3519 0.00024768 -0.56638 -0.00039864 -0.21449 -0.00015096 703.823673711688 707.830740727791 27.446 0.46822 27.446 27.269 27.737 -1.9073E-06 159 24 10 0 0 0 1.2528E-30 3 12675 172.8 167.49 1 1.2832 1.4515 0 132920000 54923000 78000000 35731 1440 13534 13905 55891;55892;55893 55893 TVLCGTCGQPADK 13 1 0 Unmodified _TVLCGTCGQPADK_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.832 2 703.823769 1405.63298 71030.67 0.48516 0.00034147 -0.56057 -0.00039454 -0.075401 -5.3069E-05 703.823729396715 707.830756992767 31.679 0.87809 31.679 31.415 32.293 0 295 48 10 0 0 0 0.0012299 2 13347 58.676 58.193 1 1.3939 1.1089 0 19424000 8091000 11333000 35732 1440 13534 13905 55894;55895 55895 TVLCGTCGQPADK 13 1 0 Unmodified _TVLCGTCGQPADK_ 0 0 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.8243 2 703.823769 1405.63298 70230.77 0.55237 0.00038877 -0.61265 -0.0004312 -0.060279 -4.2426E-05 703.823724822355 707.83070829748 31.874 0.8336 31.874 31.565 32.398 0 258 45 9 0 0 0 0.0016368 2 12985 57.019 53.346 1 1.4456 1.1609 0 14898000 6054300 8843900 35733 1440 13534 13905 55896;55897 55897 TVLDPVTGDLSDTR 14 0 1 Unmodified _TVLDPVTGDLSDTR_ 0 0 0 A8K6V3;Q15393;B3KQH1 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.8813 2 744.880652 1487.74675 73108.13 0.928 0.00069125 -0.30091 -0.00022414 0.6271 0.00046711 745.382246547586 749.884391754584 84.417 0.60151 84.417 84.162 84.764 0 169 47 6 0 0 0 0.00010399 2 50567 100.72 100.72 1 1.4439 1.4905 0 24007000 8474900 15532000 35734 764 13535 13906 55898;55899 55899 TVLDQQQTPSR 11 0 1 Unmodified _TVLDQQQTPSR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.8348 2 636.830766 1271.64698 76631.77 0.6916 0.00044043 0.049609 3.1592E-05 0.7412 0.00047202 636.830897106781 641.835070730404 25.935 0.46533 25.935 25.695 26.16 0 98 24 7 0 0 0 2.7976E-17 3 11418 160.75 101.6 1 2.2581 2.31 0 34408000 9927800 24481000 35735 1207 13536 13907 55900;55901;55902 55901 TVLDQQQTPSR 11 0 1 Unmodified _TVLDQQQTPSR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.836 2 636.830766 1271.64698 77660.62 0.69075 0.00043989 0.41345 0.0002633 1.1042 0.00070319 636.830883021545 641.835361144349 25.614 0.49424 25.614 25.441 25.935 1.9073E-06 117 30 6 0 0 0 7.6434E-32 2 11176 187.55 134.76 1 2.2719 2.4815 0 30142000 9495100 20647000 35736 1207 13536 13907 55903;55904 55903 TVLDQQQTPSR 11 0 1 Unmodified _TVLDQQQTPSR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.8358 2 636.830766 1271.64698 76975.41 0.39309 0.00025033 0.16065 0.00010231 0.55374 0.00035264 636.830749122235 641.835073325836 29.154 0.44128 29.154 28.949 29.391 0 118 32 5 0 0 0 0.00036511 3 11774 84.213 57.098 1 1.2788 1.1012 0 2668500 1165000 1503500 35737 1207 13536 13907 55905;55906;55907 55906 TVLDQQQTPSR 11 0 1 Unmodified _TVLDQQQTPSR_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.8354 2 636.830766 1271.64698 77934.91 0.22497 0.00014327 0.2309 0.00014704 0.45587 0.00029031 636.830758188803 641.835187798125 29.406 0.49288 29.406 29.184 29.676 0 103 28 5 0 0 0 0.00038376 2 11435 82.749 51.328 1 1.1963 1.0394 0 2644600 1189600 1455000 35738 1207 13536 13907 55908;55909 55908 TVLDTSYALIGETVNNYR 18 0 1 Unmodified _TVLDTSYALIGETVNNYR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1020.5225 2 1015.01547 2028.01638 NaN NaN NaN 0.77859 0.00079028 NaN NaN NaN NaN 117.82 0.41638 117.82 117.64 118.06 0 0 0 0 0.00028725 3 75452 62.891 50.33 1 NaN NaN 0 6228000 0 6228000 35739 1681 13537 13908 55910;55911;55912 55911 TVLDTSYALIGETVNNYR 18 0 1 Unmodified _TVLDTSYALIGETVNNYR_ 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1015.5218 2 1015.01547 2028.01638 59010.33 0.42824 0.00043467 1.5254 0.0015483 1.9536 0.001983 1015.51923735761 1020.0197065048 129.7 0.47816 129.7 129.55 130.02 0 162 21 11 0 0 0 1.823E-05 2 78492 73.927 73.927 1 0.6025 0.49956 0 20427000 11480000 8947100 35740 1681 13537 13908 55913;55914 55914 TVLEHYALEDDPLAAFK 17 1 0 Unmodified _TVLEHYALEDDPLAAFK_ 0 0 0 Q0VAB1;A0A024R0M6;Q3ZCQ8;M0R0C3;M0R2F8 Q0VAB1 Q0VAB1 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.6691 3 644.663158 1930.96764 77562.67 1.1362 0.00073246 -0.10147 -6.5417E-05 1.0347 0.00066705 644.997793170034 647.66883608849 111.39 0.56933 111.39 111.12 111.69 0 133 40 6 0 0 0 0.00044596 1 70026 26.548 26.548 1 2.4248 2.4913 0 10674000 2632900 8041300 35741 53 13538 13909 55915 55915 TVLEHYALEDDPLAAFK 17 1 0 Unmodified _TVLEHYALEDDPLAAFK_ 0 0 0 Q0VAB1;A0A024R0M6;Q3ZCQ8;M0R0C3;M0R2F8 Q0VAB1 Q0VAB1 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.3349 3 644.663158 1930.96764 78516.29 0.88954 0.00057345 -0.46838 -0.00030195 0.42116 0.00027151 644.662921437504 647.334196353186 110.48 0.59062 110.48 110.15 110.74 0 132 41 6 0 0 0 0.00045538 1 71170 37.157 37.157 1 1.6441 1.6732 0 12447000 4900000 7546800 35742 53 13538 13909 55916 55916 TVLFTNAR 8 0 1 Unmodified _TVLFTNAR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.265 2 461.261259 920.507966 NaN NaN NaN 0.21836 0.00010072 NaN NaN NaN NaN 48.145 0.87547 48.145 47.792 48.667 0 0 0 0 0.03914 1 27002 54.205 29.573 1 NaN NaN 0 17389000 0 17389000 35743 1563 13539 13910 55917 55917 TVLFTNAR 8 0 1 Unmodified _TVLFTNAR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.2608 2 461.261259 920.507966 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.176 1 48.176 47.676 48.676 -3.8147E-06 0 0 0 0.0098898 1 26913 77.072 36.869 1 35744 1563 13539 13910 55918 55918 TVLGTPEVLLGALPGAGGTQR 21 0 1 Unmodified _TVLGTPEVLLGALPGAGGTQR_ 0 0 0 E9KL44;P40939 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1004.5665 2 1004.0653 2006.11604 62103.72 0.3629 0.00036437 0.0082602 8.2938E-06 0.37116 0.00037267 1004.56693822228 1009.06945101281 122.9 0.65573 122.9 122.61 123.26 0 332 49 11 0 0 0 1.2808E-07 2 79599 65.092 65.092 1 1.1727 1.2176 0 37854000 17099000 20755000 35745 1228 13540 13911 55919;55920 55919 TVLGTPEVLLGALPGAGGTQR 21 0 1 Unmodified _TVLGTPEVLLGALPGAGGTQR_ 0 0 0 E9KL44;P40939 E9KL44 E9KL44 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1004.5665 2 1004.0653 2006.11604 61800.32 0.54317 0.00054538 -0.22426 -0.00022517 0.31892 0.00032021 1004.56679912128 1009.06933490448 122.39 0.7384 122.39 122.11 122.85 7.6294E-06 367 58 10 0 0 0 6.6728E-07 2 81190 57.136 57.136 1 1.1031 1.2228 0 42586000 21038000 21548000 35746 1228 13540 13911 55921;55922 55922 TVLHTGSAPSSSTPFNK 17 1 0 Unmodified _TVLHTGSAPSSSTPFNK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.2945 3 577.628448 1729.86351 79923.54 0.61652 0.00035612 -1.6221 -0.00093696 -1.0056 -0.00058084 578.294223160377 580.299235138682 43.746 0.99388 43.746 43.237 44.231 0 320 87 8 0 0 0 0.00051207 2 23376 39.256 34.535 1 0.5013 0.54941 0 52654000 30104000 22549000 35747 1366 13541 13912 55923;55924 55924 TVLHTGSAPSSSTPFNK 17 1 0 Unmodified _TVLHTGSAPSSSTPFNK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.9443 2 865.939033 1729.86351 69712.06 0.88842 0.00076932 -1.1722 -0.001015 -0.28373 -0.0002457 866.439537947518 869.943907135097 43.762 0.23848 43.762 43.609 43.848 0 53 20 4 0 0 0 6.4625E-05 1 23402 74.76 74.76 1 0.86408 0.9003 0 12309000 4646000 7663400 35748 1366 13541 13912 55925 55925 TVLHTGSAPSSSTPFNK 17 1 0 Unmodified _TVLHTGSAPSSSTPFNK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.9393 2 865.939033 1729.86351 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.448 1 42.448 41.948 42.948 0 0 0 0 8.5757E-19 1 22890 127.02 106.24 1 35749 1366 13541 13912 55926 55926 TVLHTGSAPSSSTPFNK 17 1 0 Unmodified _TVLHTGSAPSSSTPFNK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.9463 2 865.939033 1729.86351 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.489 1 42.489 41.989 42.989 0 0 0 0 8.8362E-19 1 22921 126.83 100.05 1 35750 1366 13541 13912 55927 55927 TVLHTGSAPSSSTPFNK 17 1 0 Unmodified _TVLHTGSAPSSSTPFNK_ 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.6288 3 577.628448 1729.86351 80188.99 0.17649 0.00010194 0.17094 9.8741E-05 0.34743 0.00020069 577.628532999535 580.634103504062 50.788 0.64264 50.788 50.539 51.182 3.8147E-06 136 44 4 0 0 0 0.021044 1 24367 21 16.898 1 0.90527 0.73463 0 2835400 1860000 975390 35751 1366 13541 13912 55928 55928 TVLIACNVK 9 1 0 Unmodified _TVLIACNVK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 513.2986 2 509.291702 1016.56885 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.66 1 52.66 52.16 53.16 0 0 0 0 0.05463 1 29312 45.081 15.932 1 35752 568 13542 13913 55929 55929 TVLPTVPESPEEEVK 15 1 0 Unmodified _TVLPTVPESPEEEVK_ 0 0 0 B4DLG2;O75152;E9PQ61;E9PBY7;Q0D2N5 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.4424 2 827.432718 1652.85088 71685.88 0.7366 0.00060949 0.2761 0.00022846 1.0127 0.00083794 827.432693533978 831.440216550573 85.835 0.63435 85.835 85.427 86.061 0 202 53 6 0 0 0 0.0013373 2 51503 48.044 33.886 1 1.7735 1.7829 0 9940000 3799700 6140300 35753 996 13543 13914 55930;55931 55930 TVLPTVPESPEEEVK 15 1 0 Unmodified _TVLPTVPESPEEEVK_ 0 0 0 B4DLG2;O75152;E9PQ61;E9PBY7;Q0D2N5 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.4403 2 827.432718 1652.85088 68676.83 1.0585 0.0008758 0.04746 3.927E-05 1.1059 0.00091507 827.43245190184 831.439773603069 84.928 0.87026 84.928 84.641 85.512 0 212 73 5 0 0 0 0.00035806 2 52175 59.198 50.244 1 2.0389 2.1039 0 11494000 4186100 7307500 35754 996 13543 13914 55932;55933 55932 TVLPTVPESPEEEVK 15 1 0 Unmodified _TVLPTVPESPEEEVK_ 0 0 0 B4DLG2;O75152;E9PQ61;E9PBY7;Q0D2N5 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.9419 2 827.432718 1652.85088 67534.77 0.80811 0.00066865 0.10552 8.7308E-05 0.91362 0.00075596 827.432290289366 831.440045978929 98.384 1.0235 98.384 97.833 98.856 0 139 61 5 0 0 0 0.02503 3 54575 29.299 23.196 1 1.906 1.5494 0 1899100 713130 1186000 35755 996 13543 13914 55934;55935;55936 55934 TVLQEIK 7 1 0 Unmodified _TVLQEIK_ 0 0 0 A0A0D9SGE8;Q8IWS0;Q5JRC6;B4E138 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 419.7607 2 415.752736 829.490919 NaN NaN NaN 1.2826 0.00053323 NaN NaN NaN NaN 45.037 0.59613 45.037 44.577 45.173 0 0 0 0 0.031658 1 24543 72.138 34.493 1 NaN NaN 0 25717000 0 25717000 35756 528 13544 13915 55937 55937 TVLQELINVLK 11 1 0 Unmodified _TVLQELINVLK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.3997 2 635.39247 1268.77039 76580.97 0.53855 0.00034219 -0.045108 -2.8661E-05 0.49344 0.00031353 635.392945170228 639.399400040022 133.45 0.3634 133.45 133.22 133.59 -1.5259E-05 25 9 5 0 0 0 3.3061E-08 2 87392 120.15 85.902 1 2.4941 2.5022 0 18664000 5540700 13124000 35757 1602 13545 13916 55938;55939 55938 TVLQELINVLK 11 1 0 Unmodified _TVLQELINVLK_ 0 0 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.3995 2 635.39247 1268.77039 NaN NaN NaN -0.054594 -3.4689E-05 NaN NaN NaN NaN 133.3 0.5184 133.3 132.96 133.48 0 0 0 0 0.00205 1 89221 78.334 54.906 1 NaN NaN 0 10835000 0 10835000 35758 1602 13545 13916 55940 55940 TVLQIDDNVTSAVEGINR 18 0 1 Unmodified _TVLQIDDNVTSAVEGINR_ 0 0 0 Q15785;B4DXU3 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 977.5117 2 972.505268 1942.99598 NaN NaN NaN -0.14485 -0.00014087 NaN NaN NaN NaN 106.69 0.56482 106.69 106.35 106.92 0 0 0 0 1.8678E-09 2 66362 88.561 76.001 1 NaN NaN 0 8585600 0 8585600 35759 1765 13546 13917 55941;55942 55942 TVLQLSLR 8 0 1 Unmodified _TVLQLSLR_ 0 0 0 A8K245;Q99986;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.2976 2 465.292559 928.570566 93072.95 0.83615 0.00038906 -0.061905 -2.8804E-05 0.77425 0.00036025 465.292358129477 470.296796345667 84.318 0.56308 84.318 83.996 84.56 0 121 43 4 0 0 0 0.0087985 1 50423 77.072 28.013 1 1.6717 1.7788 0 43136000 22753000 20382000 35760 707 13547 13918 55943 55943 TVLQLSLR 8 0 1 Unmodified _TVLQLSLR_ 0 0 0 A8K245;Q99986;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2927 2 465.292559 928.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.04 1 83.04 82.54 83.54 0 0 0 0 0.025116 1 50854 65.252 15.894 1 35761 707 13547 13918 55944 55944 TVLVALDTVSCLEQGNNSR 19 0 1 Unmodified _TVLVALDTVSCLEQGNNSR_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1043.5291 2 1038.52314 2075.03172 59004.37 0.93909 0.00097527 -0.70908 -0.0007364 0.23001 0.00023887 1039.02412303645 1043.52715899142 110.39 0.45804 110.39 110.1 110.56 0 142 32 6 0 0 0 5.9499E-23 1 69258 134.88 134.88 1 0.60698 0.6194 0 30803000 17253000 13550000 35762 1803 13548 13919 55945 55945 TVLVALDTVSCLEQGNNSR 19 0 1 Unmodified _TVLVALDTVSCLEQGNNSR_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1043.5275 2 1038.52314 2075.03172 60767.74 0.59442 0.00061732 -0.19491 -0.00020242 0.39951 0.0004149 1039.02543561443 1043.52787622657 109.81 0.35111 109.81 109.59 109.94 0 105 23 6 0 0 0 7.0489E-12 1 70549 102.52 102.52 1 0.53787 0.53726 0 16827000 9125700 7701800 35763 1803 13548 13919 55946 55946 TVLVALDTVSCLEQGNNSR 19 0 1 Unmodified _TVLVALDTVSCLEQGNNSR_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1043.5291 2 1038.52314 2075.03172 NaN NaN NaN 0.20105 0.00020879 NaN NaN NaN NaN 121.67 0.87663 121.67 121.31 122.18 7.6294E-06 0 0 0 0.00091902 1 72314 53.377 45.833 1 NaN NaN 0 3590700 0 3590700 35764 1803 13548 13919 55947 55947 TVLVALDTVSCLEQGNNSR 19 0 1 Unmodified _TVLVALDTVSCLEQGNNSR_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1043.5297 2 1038.52314 2075.03172 NaN NaN NaN 0.34471 0.00035799 NaN NaN NaN NaN 121.51 0.73828 121.51 121.17 121.91 0 0 0 0 0.017008 1 71266 37.654 32.048 1 NaN NaN 0 3634700 0 3634700 35765 1803 13548 13919 55948 55948 TVLVNADGEEVAMR 14 0 1 Oxidation (M) _TVLVNADGEEVAM(ox)R_ TVLVNADGEEVAM(1)R TVLVNADGEEVAM(46.84)R 0 1 0 Q03252;A0A0A7M1X5 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.8832 2 760.37468 1518.73481 68254.55 0.87835 0.00066788 0.68375 0.00051991 1.5621 0.0011878 760.375942635897 765.379270003888 54.528 0.76683 54.528 54.292 55.059 0 157 64 6 0 0 0 0.034691 1 31434 46.844 39.463 1 1.219 1.2645 0 21921000 8769800 13151000 35766 1682 13549 13920 55949 55949 1499 TVNEDVEEMEIDEQTK 16 1 0 Oxidation (M) _TVNEDVEEM(ox)EIDEQTK_ TVNEDVEEM(1)EIDEQTK TVNEDVEEM(68)EIDEQTK 0 1 0 D3DS96;Q9NRL2;Q59G54 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 967.4288 2 962.920043 1923.82553 NaN NaN NaN -0.10923 -0.00010518 NaN NaN NaN NaN 50.279 0.18611 50.279 50.124 50.31 0 0 0 0 8.9059E-05 1 27675 67.997 62.613 1 NaN NaN 0 6055100 0 6055100 35767 1187 13550 13921 55950 55950 904 TVNEDVEEMEIDEQTK 16 1 0 Oxidation (M) _TVNEDVEEM(ox)EIDEQTK_ TVNEDVEEM(1)EIDEQTK TVNEDVEEM(53.45)EIDEQTK 0 1 0 D3DS96;Q9NRL2;Q59G54 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.928 2 962.920043 1923.82553 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.008 1 49.008 48.508 49.508 0 0 0 0 0.0017659 1 27519 53.448 47.602 1 35768 1187 13550 13921 55951 55951 904 TVNELQNLSSAEVVVPR 17 0 1 Unmodified _TVNELQNLSSAEVVVPR_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 933.0046 2 927.999622 1853.98469 63374.89 0.97175 0.00090178 0.077672 7.2079E-05 1.0494 0.00097386 927.999709770564 933.003755042302 102.08 0.97134 102.08 101.62 102.59 7.6294E-06 378 78 7 0 0 0 2.4861E-34 3 62857 192.18 192.18 1 1.5609 1.5968 0 33698000 12626000 21071000 35769 1364 13551 13922 55952;55953;55954 55954 TVNELQNLSSAEVVVPR 17 0 1 Unmodified _TVNELQNLSSAEVVVPR_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 933.0063 2 927.999622 1853.98469 63274.09 0.65059 0.00060374 0.25428 0.00023597 0.90486 0.00083971 928.000006963152 933.00382302544 101.46 0.8986 101.46 101.1 102 0 300 71 6 0 0 0 9.619E-07 2 63734 106.32 106.32 1 1.6154 1.6701 0 21665000 8428500 13236000 35770 1364 13551 13922 55955;55956 55955 TVNELQNLSSAEVVVPR 17 0 1 Unmodified _TVNELQNLSSAEVVVPR_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 933.0049 2 927.999622 1853.98469 63856.07 0.92447 0.0008579 0.47681 0.00044248 1.4013 0.0013004 928.00055088881 933.505746949966 114.5 0.56308 114.5 114.28 114.84 -7.6294E-06 110 24 6 0 0 0 0.002673 2 66884 46.408 46.408 1 1.1751 0.98544 0 4120700 1664400 2456300 35771 1364 13551 13922 55957;55958 55957 TVNELQNLSSAEVVVPR 17 0 1 Unmodified _TVNELQNLSSAEVVVPR_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 933.0066 2 927.999622 1853.98469 62551.37 0.59142 0.00054884 0.16438 0.00015254 0.7558 0.00070138 928.00016926811 933.505123884219 114.38 0.54207 114.38 114.13 114.67 0 101 22 6 0 0 0 0.010569 2 65832 46.704 46.704 1 0.98701 0.84349 0 3254600 1617100 1637500 35772 1364 13551 13922 55959;55960 55959 TVNELQNLTAAEVVVPR 17 0 1 Unmodified _TVNELQNLTAAEVVVPR_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 932.5146 2 927.00999 1852.00543 65021.34 0.78531 0.00072799 0.18082 0.00016762 0.96613 0.00089561 927.010246065276 932.014221628822 110.01 0.57207 110.01 109.8 110.37 -7.6294E-06 159 38 6 0 0 0 1.6252E-13 5 68945 124.3 124.3 1 2.652 2.7216 0 25749000 6521400 19228000 35773 2087 13552 13923 55961;55962;55963;55964;55965 55964 TVNELQNLTAAEVVVPR 17 0 1 Unmodified _TVNELQNLTAAEVVVPR_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 933.0178 2 927.00999 1852.00543 64953.05 1.2155 0.0011268 0.86328 0.00080027 2.0788 0.0019271 927.512851292458 932.516030345708 110.51 0.31674 110.51 110.33 110.65 0 92 24 5 0 0 0 0.041569 1 69351 22.885 11.98 1 1.3754 1.4147 0 10163000 3630900 6532100 35774 2087 13552 13923 55966 55966 TVNELQNLTAAEVVVPR 17 0 1 Unmodified _TVNELQNLTAAEVVVPR_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 932.0143 2 927.00999 1852.00543 64857.28 0.56906 0.00052752 0.15353 0.00014232 0.72259 0.00066985 927.009976740635 932.515572188531 109.49 0.79093 109.49 109.24 110.04 0 187 52 6 0 0 0 1.4136E-12 3 70185 116.51 116.51 1 2.7943 2.8005 0 18197000 4776100 13421000 35775 2087 13552 13923 55967;55968;55969 55968 TVNELQNLTAAEVVVPR 17 0 1 Unmodified _TVNELQNLTAAEVVVPR_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 932.0161 2 927.00999 1852.00543 64154.32 0.84641 0.00078463 -0.29102 -0.00026978 0.55539 0.00051485 927.00940995375 932.013591295625 121.51 0.5601 121.51 121.33 121.89 0 94 28 5 0 0 0 0.00014676 2 72281 55.196 46.772 1 1.8681 1.5768 0 4779900 1412700 3367200 35776 2087 13552 13923 55970;55971 55970 TVNELQNLTAAEVVVPR 17 0 1 Unmodified _TVNELQNLTAAEVVVPR_ 0 0 0 Q9NZI8;D3DTW3 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 927.0101 2 927.00999 1852.00543 65223.5 0.67766 0.0006282 -0.30822 -0.00028573 0.36944 0.00034247 927.009892118009 932.013839185062 121.33 0.55273 121.33 121.13 121.68 7.6294E-06 118 30 6 0 0 0 0.00013349 3 71287 56.569 50.536 1 2.0872 1.8097 0 4321800 1513700 2808100 35777 2087 13552 13923 55972;55973;55974 55974 TVNLNLWDTAGQEEYDR 17 0 1 Unmodified _TVNLNLWDTAGQEEYDR_ 0 0 0 Q6ICQ8;P84095 Q6ICQ8 Q6ICQ8 ARHG;RHOG Rho-related GTP-binding protein RhoG MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1017.4766 2 1012.47143 2022.9283 59090.45 0.18597 0.00018829 1.0918 0.0011054 1.2777 0.0012937 1012.97216161036 1017.47687030382 104.07 0.091682 104.07 104.04 104.13 0 16 7 4 0 0 0 0.0086685 1 64285 32.624 24.52 1 1.1518 1.2023 0 4916100 2288400 2627600 35778 1672 13553 13924 55975 55975 TVNLNLWDTAGQEEYDR 17 0 1 Unmodified _TVNLNLWDTAGQEEYDR_ 0 0 0 Q6ICQ8;P84095 Q6ICQ8 Q6ICQ8 ARHG;RHOG Rho-related GTP-binding protein RhoG MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1017.4762 2 1012.47143 2022.9283 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.36 1 103.36 102.86 103.86 0 0 0 0 0.02028 1 65365 42.809 31.597 1 35779 1672 13553 13924 55976 55976 TVNQQTMAAPVVK 13 1 0 Oxidation (M) _TVNQQTM(ox)AAPVVK_ TVNQQTM(1)AAPVVK TVNQQTM(42.34)AAPVVK 0 1 0 E7EPN9;Q9Y520;B4DM27 E7EPN9 E7EPN9 PRRC2C Protein PRRC2C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.8785 2 701.871576 1401.7286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.032 1 29.032 28.532 29.532 0 0 0 0 0.019756 1 13928 42.336 27.669 1 35780 1219 13554 13925 55977 55977 929 TVNVVQFEPSK 11 1 0 Unmodified _TVNVVQFEPSK_ 0 0 0 A0A090N8G0;P41250 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.3423 2 624.335153 1246.65575 78144.8 0.32218 0.00020115 0.13996 8.7384E-05 0.46215 0.00028853 624.3352054437 628.342192046542 69.966 0.56709 69.966 69.795 70.363 0 193 51 6 0 0 0 8.4595E-06 1 40683 109.42 90.148 1 3.7065 3.9003 0 30630000 7168300 23461000 35781 457 13555 13926 55978 55978 TVNVVQFEPSK 11 1 0 Unmodified _TVNVVQFEPSK_ 0 0 0 A0A090N8G0;P41250 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3434 2 624.335153 1246.65575 NaN NaN NaN 0.40642 0.00025374 NaN NaN NaN NaN 68.707 0.53365 68.707 68.557 69.091 0 0 0 0 1.9073E-05 1 40848 103.22 83.434 1 NaN NaN 0 25161000 0 25161000 35782 457 13555 13926 55979 55979 TVPEDTDPELVFLCR 15 0 1 Unmodified _TVPEDTDPELVFLCR_ 0 0 0 A0A024R9K2;Q8TBE0 A0A024R9K2 A0A024R9K2 BAHD1 Bromo adjacent homology domain-containing 1 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.4382 2 895.935102 1789.85565 64442.73 0.66097 0.00059219 -1.4833 -0.001329 -0.82237 -0.00073679 895.933598761275 901.441071497411 121.65 0.39076 121.65 121.48 121.88 0 77 20 6 0 0 0 0.020132 1 72400 31.185 15.296 1 0.59482 0.49925 0 4214800 2369300 1845500 35783 281 13556 13927 55980 55980 TVPEELVKPEELSK 14 2 0 Unmodified _TVPEELVKPEELSK_ 0 0 1 Q9UMS4;F5GY56;H0YGF3 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.4537 2 799.437803 1596.86105 69293.88 0.5866 0.00046895 -0.13924 -0.00011131 0.44736 0.00035763 799.436976425992 807.452438834803 69.653 0.5007 69.653 69.35 69.851 0 111 41 4 0 0 0 0.0085053 1 40339 52.693 39.737 1 1.2487 1.4648 0 13397000 5777100 7620200 35784 2114 13557 13928 55981 55981 TVPEELVKPEELSK 14 2 0 Unmodified _TVPEELVKPEELSK_ 0 0 1 Q9UMS4;F5GY56;H0YGF3 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.9639 3 533.294294 1596.86105 83628.47 0.25781 0.00013749 0.25418 0.00013555 0.51199 0.00027304 533.294510649388 538.637162494503 69.694 0.90195 69.694 69.284 70.186 0 362 79 8 0 0 0 0.004182 2 40372 37.654 25.028 1 1.4417 1.702 0 52482000 24571000 27911000 35785 2114 13557 13928 55982;55983 55982 TVPEELVKPEELSK 14 2 0 Unmodified _TVPEELVKPEELSK_ 0 0 1 Q9UMS4;F5GY56;H0YGF3 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.452 2 799.437803 1596.86105 68076.13 0.73736 0.00058947 -0.17929 -0.00014333 0.55807 0.00044614 799.437175092689 807.452108007645 68.284 0.48779 68.284 68 68.488 0 146 37 6 0 0 0 0.019941 1 40392 46.706 33.75 1 1.3055 1.4921 0 15413000 6707200 8705900 35786 2114 13557 13928 55984 55984 TVPEELVKPEELSK 14 2 0 Unmodified _TVPEELVKPEELSK_ 0 0 1 Q9UMS4;F5GY56;H0YGF3 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.6371 3 533.294294 1596.86105 82493.45 0.62405 0.0003328 -0.18936 -0.00010099 0.43468 0.00023181 533.294075859435 538.636921839964 68.274 0.77643 68.274 67.883 68.66 0 344 63 8 0 0 0 0.013354 2 40431 30.483 17.605 1 1.2873 1.491 0 54347000 22507000 31840000 35787 2114 13557 13928 55985;55986 55985 TVPEELVKPEELSK 14 2 0 Unmodified _TVPEELVKPEELSK_ 0 0 1 Q9UMS4;F5GY56;H0YGF3 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.9714 3 533.294294 1596.86105 83304.75 0.38733 0.00020656 0.062048 3.309E-05 0.44938 0.00023965 533.628712388033 538.637042542325 79.578 0.70977 79.578 79.291 80.001 0 229 43 8 0 0 0 0.013354 1 42031 32.275 19.398 1 1.1295 0.96645 0 4439900 1991800 2448100 35788 2114 13557 13928 55987 55987 TVPPVDIVFER 11 0 1 Unmodified _TVPPVDIVFER_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.3564 2 636.353345 1270.69214 77212.2 0.73328 0.00046663 0.22736 0.00014468 0.96064 0.00061131 636.353617189142 641.357292058684 106.91 0.86981 106.91 106.56 107.43 0 197 66 5 0 0 0 0.01831 1 66555 44.863 25.592 1 0.79029 0.81594 0 10263000 5443100 4820400 35789 1699 13558 13929 55988 55988 TVPPVDIVFER 11 0 1 Unmodified _TVPPVDIVFER_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3596 2 636.353345 1270.69214 77860.87 0.7885 0.00050176 0.29411 0.00018716 1.0826 0.00068892 636.353578040731 641.357508562202 106.28 0.74426 106.28 105.98 106.73 -7.6294E-06 182 57 4 0 0 0 0.0081744 2 67695 51.276 32.005 1 0.89238 0.87832 0 13303000 6745900 6557600 35790 1699 13558 13929 55989;55990 55990 TVQIPVYDFVSHSR 14 0 1 Unmodified _TVQIPVYDFVSHSR_ 0 0 0 A0A024R912;Q9BZX2;B4DGD3 A0A024R912 A0A024R912 UCK2 Uridine kinase;Uridine-cytidine kinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.2889 3 549.954495 1646.84166 82350.24 0.85888 0.00047235 -0.027232 -1.4976E-05 0.83165 0.00045737 550.288509758295 553.290619409802 96.763 0.96988 96.763 96.454 97.424 0 240 78 5 0 0 0 0.001289 3 60482 40.941 35.35 1 1.9084 1.9956 0 22603000 8300400 14302000 35791 268 13559 13930 55991;55992;55993 55993 TVQIPVYDFVSHSR 14 0 1 Unmodified _TVQIPVYDFVSHSR_ 0 0 0 A0A024R912;Q9BZX2;B4DGD3 A0A024R912 A0A024R912 UCK2 Uridine kinase;Uridine-cytidine kinase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.2892 3 549.954495 1646.84166 82365.71 0.58573 0.00032212 -0.24005 -0.00013202 0.34568 0.00019011 549.95430210526 553.624758058801 110.25 0.51852 110.25 110.03 110.55 -7.6294E-06 91 28 5 0 0 0 0.049008 1 63720 10.854 10.854 1 1.5824 1.3513 0 2780200 1101500 1678700 35792 268 13559 13930 55994 55994 TVQLTSSELESTLETLK 17 1 0 Unmodified _TVQLTSSELESTLETLK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 939.9999 2 939.998953 1877.98335 NaN NaN NaN 0.23676 0.00022255 NaN NaN NaN NaN 116.4 0.47429 116.4 116.24 116.72 0 0 0 0 2.7431E-07 2 74261 114.7 91.479 1 NaN NaN 0 8128400 8128400 0 35793 1207 13560 13931 55995;55996 55996 TVQLTSSELESTLETLK 17 1 0 Unmodified _TVQLTSSELESTLETLK_ 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 944.5082 2 939.998953 1877.98335 62869.73 0.87021 0.00081799 0.3358 0.00031565 1.206 0.0011336 940.000377477034 944.507168161228 128.94 0.78886 128.94 128.62 129.41 0 213 36 8 0 0 0 0.00011897 1 77814 58.071 45.711 1 0.67889 0.54424 0 8317900 3441100 4876900 35794 1207 13560 13931 55997 55997 TVQSLEIDLDSMR 13 0 1 Oxidation (M) _TVQSLEIDLDSM(ox)R_ TVQSLEIDLDSM(1)R TVQSLEIDLDSM(133.05)R 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 761.8751 2 761.874513 1521.73447 68985.59 0.86414 0.00065836 -0.18225 -0.00013885 0.68189 0.00051952 761.874384426827 766.878463790186 84.328 1.1522 84.328 84.134 85.286 0 443 93 6 0 0 0 5.5523E-14 3 50543 133.05 133.05 1 1.4239 1.6468 0 163110000 62382000 100730000 35795 316 13561 13932 55998;55999;56000 55999 237 TVQSLEIDLDSMR 13 0 1 Oxidation (M) _TVQSLEIDLDSM(ox)R_ TVQSLEIDLDSM(1)R TVQSLEIDLDSM(138.63)R 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.8745 2 761.874513 1521.73447 68186.4 0.88676 0.0006756 -0.27147 -0.00020683 0.61529 0.00046878 761.874351176161 766.878445381076 83.47 0.73717 83.47 83.145 83.882 0 325 56 7 0 0 0 6.7231E-19 2 51079 138.63 138.63 1 1.6004 1.8544 0 292600000 112290000 180310000 35796 316 13561 13932 56001;56002 56002 237 TVQSLEIDLDSMR 13 0 1 Oxidation (M) _TVQSLEIDLDSM(ox)R_ TVQSLEIDLDSM(1)R TVQSLEIDLDSM(103.34)R 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.8792 2 761.874513 1521.73447 68186.48 1.0289 0.00078392 0.87273 0.00066491 1.9017 0.0014488 761.875209744121 766.879037290624 83.924 0.23781 83.924 83.864 84.102 0 92 21 7 0 0 0 3.5891E-06 2 51545 103.34 103.34 1 1.2596 1.4584 0 67242000 27618000 39624000 35797 316 13561 13932 56003;56004 56004 237 TVQSLEIDLDSMR 13 0 1 Oxidation (M) _TVQSLEIDLDSM(ox)R_ TVQSLEIDLDSM(1)R TVQSLEIDLDSM(113.22)R 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 761.8746 2 761.874513 1521.73447 68131.55 0.88459 0.00067395 -0.37676 -0.00028704 0.50783 0.00038691 761.874533347702 766.878262861575 96.864 1.1079 96.864 96.539 97.647 0 238 58 6 0 0 0 5.728E-09 1 54343 113.22 113.22 1 0.75035 0.61661 0 11958000 6779600 5178700 35798 316 13561 13932 56005 56005 237 TVQSLEIDLDSMR 13 0 1 Oxidation (M) _TVQSLEIDLDSM(ox)R_ TVQSLEIDLDSM(1)R TVQSLEIDLDSM(72.34)R 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.382 2 761.874513 1521.73447 NaN NaN NaN 0.046255 3.524E-05 NaN NaN NaN NaN 114.95 0.46103 114.95 114.73 115.19 0 0 0 0 0.00061807 1 67295 72.34 45.225 1 NaN NaN 0 1951400 0 1951400 35799 316 13561 13932 56006 56006 237 TVQSLEIDLDSMR 13 0 1 Oxidation (M) _TVQSLEIDLDSM(ox)R_ TVQSLEIDLDSM(1)R TVQSLEIDLDSM(72.34)R 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 761.8739 2 761.874513 1521.73447 68403.34 0.52532 0.00040023 -0.027839 -2.121E-05 0.49748 0.00037902 761.874659714053 766.878503127182 96.836 1.0838 96.836 96.48 97.563 0 220 52 6 0 0 0 7.8555E-05 1 53484 72.34 72.34 1 0.80134 0.66488 0 5739600 3283200 2456400 35800 316 13561 13932 56007 56007 237 TVQSLEIDLDSMR 13 0 1 Unmodified _TVQSLEIDLDSMR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.3799 2 753.877056 1505.73956 NaN NaN NaN 1.0231 0.00077127 NaN NaN NaN NaN 102.66 0.4625 102.66 102.32 102.78 -7.6294E-06 0 0 0 0.0024172 1 63171 69.721 47.693 1 NaN NaN 0 4725000 4725000 0 35801 316 13561 13933 56008 56008 TVQSNSPISALAPTGK 16 1 0 Unmodified _TVQSNSPISALAPTGK_ 0 0 0 Q53XM7;O95292;B4DNS4;Q6ZSP7;Q6ZR82;B3KVU7 Q53XM7 Q53XM7 VAPB Vesicle-associated membrane protein-associated protein B/C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.9327 2 785.925394 1569.83624 NaN NaN NaN 0.28081 0.0002207 NaN NaN NaN NaN 74.808 0.41633 74.808 74.596 75.012 0 0 0 0 0.0045082 1 43952 54.343 36.869 1 NaN NaN 0 4011400 0 4011400 35802 1423 13562 13934 56009 56009 TVQSNSPISALAPTGK 16 1 0 Unmodified _TVQSNSPISALAPTGK_ 0 0 0 Q53XM7;O95292;B4DNS4;Q6ZSP7;Q6ZR82;B3KVU7 Q53XM7 Q53XM7 VAPB Vesicle-associated membrane protein-associated protein B/C MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.9247 2 785.925394 1569.83624 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.812 1 74.812 74.312 75.312 0 0 0 0 0.0009662 1 43928 71.241 45.198 1 35803 1423 13562 13934 56010 56010 TVQSNSPISALAPTGK 16 1 0 Unmodified _TVQSNSPISALAPTGK_ 0 0 0 Q53XM7;O95292;B4DNS4;Q6ZSP7;Q6ZR82;B3KVU7 Q53XM7 Q53XM7 VAPB Vesicle-associated membrane protein-associated protein B/C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.9331 2 785.925394 1569.83624 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.508 1 73.508 73.008 74.008 0 0 0 0 0.00085328 1 44144 62.042 43.296 1 35804 1423 13562 13934 56011 56011 TVQTAVFLYSLYK 13 1 0 Unmodified _TVQTAVFLYSLYK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.9288 2 766.921592 1531.82863 69783.48 0.78081 0.00059882 -0.05499 -4.2173E-05 0.72582 0.00055665 766.921437746815 770.928562538768 116.21 1.3288 116.21 115.82 117.15 0 391 87 7 0 0 0 2.3097E-14 2 74015 136.96 136.96 1 0.76006 0.82731 0 48925000 30769000 18156000 35805 515 13563 13935 56012;56013 56013 TVQTAVFLYSLYK 13 1 0 Unmodified _TVQTAVFLYSLYK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.4208 2 766.921592 1531.82863 70325.16 0.88166 0.00067616 -0.043715 -3.3526E-05 0.83794 0.00064264 766.921509025843 770.928526552666 115.6 0.97961 115.6 115.33 116.31 0 351 63 8 0 0 0 1.4601E-06 2 75252 110.86 110.86 1 0.77522 0.87505 0 65076000 34204000 30872000 35806 515 13563 13935 56014;56015 56014 TVQTAVFLYSLYK 13 1 0 Unmodified _TVQTAVFLYSLYK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 766.9226 2 766.921592 1531.82863 70029.35 1.0709 0.00082127 0.049841 3.8224E-05 1.1207 0.00085949 766.921440567837 770.928570982294 128.03 1.4325 128.03 127.7 129.14 0 285 61 8 0 0 0 3.4264E-06 3 77157 108.37 108.37 1 1.8959 1.4914 0 17310000 6223900 11086000 35807 515 13563 13935 56016;56017;56018 56017 TVQTAVFLYSLYK 13 1 0 Unmodified _TVQTAVFLYSLYK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 766.921 2 766.921592 1531.82863 69265.13 0.9297 0.000713 0.17403 0.00013347 1.1037 0.00084647 767.423257586493 770.928626509232 127.86 1.4814 127.86 127.38 128.86 0 281 61 8 0 0 0 0.00014979 4 76067 88.441 88.441 1 1.8598 1.4947 0 16933000 6193400 10739000 35808 515 13563 13935 56019;56020;56021;56022 56021 TVSLGAGAK 9 1 0 Unmodified _TVSLGAGAK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 402.2348 2 402.23471 802.454868 92275.25 -0.18559 -7.4651E-05 0.050225 2.0202E-05 -0.13537 -5.4449E-05 402.234734177472 406.241745731197 24.968 0.64249 24.968 24.73 25.372 0 117 32 6 0 0 0 0.0048508 2 10566 68.214 32.277 1 1.1977 1.3274 0 58647000 25995000 32652000 35809 559 13564 13936 56023;56024 56023 TVSLGAGAKDELHIVEAEAMNYEGSPIK 28 2 0 Unmodified _TVSLGAGAKDELHIVEAEAMNYEGSPIK_ 0 0 1 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 982.8362 3 977.158572 2928.45389 61397.8 0.36209 0.00035382 -0.15315 -0.00014965 0.20894 0.00020417 977.826587083476 982.835676156748 121.46 0.45495 121.46 121.31 121.76 0 134 22 10 0 0 0 0.038993 1 72336 15.938 13.399 1 1.0432 0.89288 0 9474600 4808200 4666400 35810 559 13565 13937 56025 56025 TVSLGAGAKDELHIVEAEAMNYEGSPIK 28 2 0 Unmodified _TVSLGAGAKDELHIVEAEAMNYEGSPIK_ 0 0 1 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 977.4905 3 977.158572 2928.45389 62005.47 0.35022 0.00034222 -0.42255 -0.0004129 -0.072326 -7.0674E-05 977.491246197776 982.835667916432 121.27 0.45766 121.27 121.03 121.49 -7.6294E-06 108 23 10 0 0 0 0.034107 1 71261 17.012 17.012 1 1.0679 0.90357 0 13767000 7192900 6573800 35811 559 13565 13937 56026 56026 TVSLLDENNVSSYLSK 16 1 0 Unmodified _TVSLLDENNVSSYLSK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 884.9545 2 884.951806 1767.88906 63241.14 0.67116 0.00059394 0.076071 6.7319E-05 0.74723 0.00066126 884.952152723897 888.958394621097 104.93 0.80682 104.93 104.58 105.39 0 365 65 8 0 0 0 1.8782E-07 2 64742 99.531 84.329 1 0.69361 0.75216 0 44901000 26112000 18790000 35812 1665 13566 13938 56027;56028 56027 TVSLLDENNVSSYLSK 16 1 0 Unmodified _TVSLLDENNVSSYLSK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 884.9535 2 884.951806 1767.88906 63316.37 0.61624 0.00054534 0.097196 8.6014E-05 0.71343 0.00063135 884.952284645407 888.958472638227 104.28 0.89485 104.28 103.88 104.78 7.6294E-06 435 72 8 0 0 0 7.5007E-95 3 65943 220.53 205.33 1 0.76083 0.83958 0 44036000 26778000 17258000 35813 1665 13566 13938 56029;56030;56031 56030 TVSLLDENNVSSYLSK 16 1 0 Unmodified _TVSLLDENNVSSYLSK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 884.9519 2 884.951806 1767.88906 62192.01 0.32947 0.00029156 -0.45789 -0.00040521 -0.12842 -0.00011365 884.95175782832 888.958741299722 116.5 1.0816 116.5 116.05 117.13 7.6294E-06 220 44 10 0 0 0 6.5186E-45 2 68422 172.09 172.09 1 0.49588 0.40044 0 22749000 15069000 7679800 35814 1665 13566 13938 56032;56033 56032 TVSLLDENNVSSYLSK 16 1 0 Unmodified _TVSLLDENNVSSYLSK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 884.9522 2 884.951806 1767.88906 62839.32 0.48953 0.00043321 -0.3656 -0.00032354 0.12392 0.00010967 884.951856147322 888.958989055961 116.35 1.1839 116.35 115.88 117.07 0 217 54 8 0 0 0 2.7361E-25 2 67375 148.68 133.48 1 0.47657 0.38458 0 23342000 16823000 6519100 35815 1665 13566 13938 56034;56035 56034 TVSNSVPGRPVSSLGPGQTVSSSGPTIK 28 1 1 Unmodified _TVSNSVPGRPVSSLGPGQTVSSSGPTIK_ 0 0 1 B4E223;Q68D10 B4E223 B4E223 SPTY2D1 Protein SPT2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 905.486 3 899.478634 2695.41407 64499.27 0.32482 0.00029217 0.18966 0.00017059 0.51447 0.00046276 899.813063616109 905.820602225811 80.914 0.53172 80.914 80.653 81.185 0 162 33 7 0 0 0 0.00082572 1 43723 26.556 23.4 1 1.9239 1.576 0 4801100 1592300 3208800 35816 1071 13567 13939 56036 56036 TVSNSVPGRPVSSLGPGQTVSSSGPTIK 28 1 1 Unmodified _TVSNSVPGRPVSSLGPGQTVSSSGPTIK_ 0 0 1 B4E223;Q68D10 B4E223 B4E223 SPTY2D1 Protein SPT2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 905.4863 3 899.478634 2695.41407 64435.98 0.35709 0.00032119 0.092626 8.3315E-05 0.44972 0.00040451 899.812995145131 905.820600729242 81.014 0.432 81.014 80.83 81.262 0 157 29 7 0 0 0 0.017549 2 42935 20.652 17.496 1 2.0131 1.7016 0 3673200 1205700 2467500 35817 1071 13567 13939 56037;56038 56038 TVSPPIRK 8 1 1 Unmodified _TVSPPIRK_ 0 0 1 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.2907 2 449.279452 896.544351 NaN NaN NaN -0.17711 -7.9573E-05 NaN NaN NaN NaN 20.503 0.4038 20.503 20.35 20.754 0 0 0 0 0.052423 1 6795 49.358 18.069 1 NaN NaN 0 8091000 0 8091000 35818 1010 13568 13940 56039 56039 TVSQIISLQTLK 12 1 0 Unmodified _TVSQIISLQTLK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 669.9086 2 665.90066 1329.78677 73987.45 0.5977 0.00039801 0.095454 6.3563E-05 0.69316 0.00046157 665.900779381725 669.907739706869 99.6 2.0484 99.6 98.968 101.02 0 1029 167 10 0 0 0 1.1046E-29 5 61197 172.56 172.56 1 0.70186 0.83583 0 642670000 385220000 257450000 35819 1415 13569 13941 56040;56041;56042;56043;56044 56042 TVSQIISLQTLK 12 1 0 Unmodified _TVSQIISLQTLK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.9 2 665.90066 1329.78677 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.14 1 101.14 100.64 101.64 0 0 0 0 0.052511 1 62095 50.284 29.954 1 35820 1415 13569 13941 56045 56045 TVSQIISLQTLK 12 1 0 Unmodified _TVSQIISLQTLK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.9099 2 665.90066 1329.78677 74014.6 0.76587 0.00050999 0.13818 9.2015E-05 0.90405 0.00060201 665.900808509959 669.907772473642 98.744 2.0691 98.744 98.282 100.35 0 979 171 10 0 0 0 1.4823E-22 6 62113 153.12 153.12 1 0.67999 0.80169 0 683270000 412420000 270850000 35821 1415 13569 13941 56046;56047;56048;56049;56050;56051 56048 TVSQIISLQTLK 12 1 0 Unmodified _TVSQIISLQTLK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.901 2 665.90066 1329.78677 74100.6 0.90683 0.00060386 -0.35849 -0.00023872 0.54834 0.00036514 665.900584427732 669.907378502703 112.51 2.6881 112.51 112.2 114.88 0 718 128 10 0 0 0 1.5784E-12 4 65837 127.51 127.51 1 0.7021 0.6187 0 256610000 148850000 107760000 35822 1415 13569 13941 56052;56053;56054;56055 56055 TVSQIISLQTLK 12 1 0 Unmodified _TVSQIISLQTLK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.9081 2 665.90066 1329.78677 74165.99 0.65666 0.00043727 -0.078203 -5.2075E-05 0.57845 0.00038519 665.900754242086 669.907585994846 112.38 2.519 112.38 111.96 114.48 7.6294E-06 764 122 11 0 0 0 1.1615E-17 4 64160 138.22 138.22 1 0.6979 0.60424 0 248360000 145810000 102550000 35823 1415 13569 13941 56056;56057;56058;56059 56056 TVSQIISLQTLKK 13 2 0 Unmodified _TVSQIISLQTLKK_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 486.9677 3 486.967853 1457.88173 87421.05 0.38564 0.00018779 -0.15894 -7.7401E-05 0.22669 0.00011039 486.967754075706 492.310514661664 91.366 1.2041 91.366 91.014 92.218 0 273 80 5 0 0 0 0.002858 2 50631 32.734 32.734 1 0.85225 0.73096 0 8031600 3761500 4270000 35824 1415 13570 13942 56060;56061 56061 TVSQIISLQTLKK 13 2 0 Unmodified _TVSQIISLQTLKK_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.9493 2 729.948141 1457.88173 71587.41 0.82958 0.00060555 -0.21528 -0.00015714 0.61431 0.00044841 729.948118167846 737.962232666591 91.363 0.61099 91.363 91.077 91.688 7.6294E-06 127 42 5 0 0 0 0.021238 1 50729 39.148 39.148 1 0.65836 0.57135 0 3468900 1824800 1644100 35825 1415 13570 13942 56062 56062 TVSQIISLQTLKK 13 2 0 Unmodified _TVSQIISLQTLKK_ 0 0 1 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 486.9671 3 486.967853 1457.88173 86693.15 0.22066 0.00010745 -0.3553 -0.00017302 -0.13464 -6.5566E-05 486.967626399117 492.310454292962 90.994 0.69228 90.994 90.705 91.397 0 212 42 7 0 0 0 0.050636 1 49590 14.791 14.791 1 0.87434 0.73775 0 8655800 4618100 4037700 35826 1415 13570 13942 56063 56063 TVSVGLTLLR 10 0 1 Unmodified _TVSVGLTLLR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.8321 2 529.832049 1057.64954 NaN NaN NaN -0.21312 -0.00011292 NaN NaN NaN NaN 100.56 0.58156 100.56 100.15 100.74 0 0 0 0 0.015203 1 61781 57.96 14.713 1 NaN NaN 0 9433800 9433800 0 35827 1937 13571 13943 56064 56064 TVSVGLTLLR 10 0 1 Unmodified _TVSVGLTLLR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.8323 2 529.832049 1057.64954 85742.32 0.53758 0.00028483 -0.41785 -0.00022139 0.11974 6.344E-05 529.831595552908 534.836095783075 99.74 0.71767 99.74 99.367 100.08 0 132 56 4 0 0 0 0.0083024 1 62597 56.258 56.258 1 0.72076 0.7171 0 7796700 4135600 3661200 35828 1937 13571 13943 56065 56065 TVTAAGAENIQQK 13 1 0 Unmodified _TVTAAGAENIQQK_ 0 0 0 G1UI16;Q29RF7;B3KMN2;Q96DB6 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 669.859 2 665.851698 1329.68884 77146.77 0.43632 0.00029053 0.53933 0.00035911 0.97565 0.00064964 665.852237003784 669.858923000206 30.773 0.3293 30.773 30.648 30.977 0 51 20 4 0 0 0 0.032449 1 12829 33.057 33.057 1 0.80291 0.70343 0 1028400 476700 551650 35829 1270 13572 13944 56066 56066 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(119.75)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8526 2 663.852321 1325.69009 73459.89 0.71982 0.00047786 0.062002 4.116E-05 0.78183 0.00051902 663.852177608853 667.859496583905 78.783 0.79141 78.783 78.407 79.199 0 376 71 7 0 0 0 1.2067E-08 2 46518 119.75 119.75 1 0.88675 0.98344 0 59017000 31480000 27536000 35830 828 13573 13945 56067;56068 56067 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(157.24)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8539 2 663.852321 1325.69009 74007.11 0.80726 0.0005359 0.45707 0.00030342 1.2643 0.00083933 664.353888817424 667.85986706557 93.457 1.6253 93.457 93.245 94.87 0 581 147 6 0 0 0 4.2429E-23 3 56998 157.24 128.55 1 0.87334 1.0326 0 405370000 190980000 214390000 35831 828 13573 13945 56069;56070;56071 56070 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(98.25)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8525 2 663.852321 1325.69009 74007.1 0.71988 0.00047789 0.42858 0.00028452 1.1485 0.00076241 663.852417323577 667.859915241266 94.707 1.0829 94.707 94.336 95.419 0 363 92 6 0 0 0 2.8121E-05 1 57492 98.249 76.012 1 0.81079 0.9099 0 67142000 41608000 25534000 35832 828 13573 13945 56072 56072 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(116.52)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8601 2 663.852321 1325.69009 74187.61 1.0358 0.00068762 0.1652 0.00010967 1.201 0.00079729 663.8524925701 667.85941080147 96.29 1.4957 96.29 95.301 96.797 0 401 125 5 0 0 0 1.9066E-08 3 58070 116.52 101.58 1 0.8506 0.96022 0 79963000 44974000 34989000 35833 828 13573 13945 56073;56074;56075 56073 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(74.53)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8599 2 663.852321 1325.69009 74219.7 0.80096 0.00053172 -0.43309 -0.00028751 0.36787 0.00024421 663.852292478754 667.859304766063 97.885 2.0848 97.885 97.145 99.23 7.6294E-06 444 173 6 0 0 0 9.6211E-05 2 59331 74.533 74.533 1 0.90535 1.0014 0 57639000 30920000 26719000 35834 828 13573 13945 56076;56077 56076 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(103.7)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8595 2 663.852321 1325.69009 74383.55 0.80304 0.0005331 -0.36523 -0.00024246 0.43781 0.00029064 663.852033981205 667.859259568576 100.57 0.63193 100.57 100.22 100.86 0 210 49 6 0 0 0 9.3738E-06 2 61701 103.7 94.742 1 0.88954 0.87134 0 22222000 11596000 10626000 35835 828 13573 13945 56078;56079 56079 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(91.58)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8594 2 663.852321 1325.69009 73296.61 0.85399 0.00056692 -0.38831 -0.00025778 0.46568 0.00030914 663.852092249781 667.859152088216 143.33 2.7005 143.33 142.42 145.12 0 937 283 8 0 0 0 8.3239E-05 4 90766 91.584 71.594 1 0.90869 0.90687 0 9708600 5189900 4518700 35836 828 13573 13945 56080;56081;56082;56083 56081 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(116.52)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8539 2 663.852321 1325.69009 NaN NaN NaN 0.36166 0.00024009 NaN NaN NaN NaN 90.447 1.396 90.447 89.973 91.369 0 0 0 0 1.9476E-09 2 54918 116.52 91.595 1 NaN NaN 0 6334300000 6334300000 0 35837 828 13573 13945 56084;56085 56085 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(118.71)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8543 2 663.852321 1325.69009 NaN NaN NaN 0.46952 0.0003117 NaN NaN NaN NaN 91.718 1.9483 91.718 91.358 93.306 0 0 0 0 1.5999E-13 3 55971 118.71 97.81 1 NaN NaN 0 6289600000 6289600000 0 35838 828 13573 13945 56086;56087;56088 56087 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(70.91)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8525 2 663.852321 1325.69009 NaN NaN NaN -0.33357 -0.00022144 NaN NaN NaN NaN 98.438 1.0431 98.438 98.059 99.102 0 0 0 0 0.00064304 1 60398 70.908 43.794 1 NaN NaN 0 32571000 32571000 0 35839 828 13573 13945 56089 56089 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(107.21)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8602 2 663.852321 1325.69009 NaN NaN NaN 0.12632 8.3857E-05 NaN NaN NaN NaN 99.521 0.67725 99.521 99.182 99.859 0 0 0 0 1.2061E-08 1 60740 107.21 80.691 1 NaN NaN 0 11900000 0 11900000 35840 828 13573 13945 56090 56090 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(61.16)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3617 2 663.852321 1325.69009 NaN NaN NaN 0.078488 5.2105E-05 NaN NaN NaN NaN 102.44 0.33064 102.44 102.29 102.62 0 0 0 0 0.0018635 1 63193 61.161 42.722 1 NaN NaN 0 5146100 0 5146100 35841 828 13573 13945 56091 56091 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(62.3)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8533 2 663.852321 1325.69009 NaN NaN NaN -0.48264 -0.0003204 NaN NaN NaN NaN 104.42 0.18958 104.42 104.28 104.47 0 0 0 0 0.0016682 1 64456 62.303 32.83 1 NaN NaN 0 4176100 4176100 0 35842 828 13573 13945 56092 56092 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(87.26)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.853 2 663.852321 1325.69009 NaN NaN NaN -0.03438 -2.2823E-05 NaN NaN NaN NaN 104.89 1.0468 104.89 104.44 105.49 0 0 0 0 0.00018549 2 64848 87.258 65.794 1 NaN NaN 0 5784900 5784900 0 35843 828 13573 13945 56093;56094 56094 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(111.61)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8601 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.322 1 98.322 97.822 98.822 0 0 0 0 6.2264E-11 1 60090 111.61 77.354 1 35844 828 13573 13945 56095 56095 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(91.58)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8522 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.535 1 99.535 99.035 100.04 0 0 0 0 3.4083E-05 1 60937 91.584 60.51 1 35845 828 13573 13945 56096 56096 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(51.27)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.86 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.33 1 104.33 103.83 104.83 -7.6294E-06 0 0 0 0.0093009 1 64459 51.268 21.794 1 35846 828 13573 13945 56097 56097 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(41.08)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8599 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.96 1 104.96 104.46 105.46 0 0 0 0 0.02831 1 64925 41.08 24.304 1 35847 828 13573 13945 56098 56098 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(44.32)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8524 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.2 1 109.2 108.7 109.7 0 0 0 0 0.016186 1 68326 44.318 16.575 1 35848 828 13573 13945 56099 56099 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(51.93)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.8528 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.81 1 130.81 130.31 131.31 0 0 0 0 0.0087645 1 85313 51.927 30.479 1 35849 828 13573 13945 56100 56100 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(44.31)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.852 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 144.18 1 144.18 143.68 144.68 0 0 0 0 0.016217 1 91036 44.309 22.803 1 35850 828 13573 13945 56101 56101 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(91.58)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8602 2 663.852321 1325.69009 73198.85 0.69633 0.00046226 -0.9878 -0.00065575 -0.29146 -0.00019349 663.852097782223 667.859341910978 77.784 1.1495 77.784 77.445 78.594 0 418 98 8 0 0 0 8.3239E-05 3 47002 91.584 86.888 1 0.88737 1.0016 0 64939000 32292000 32647000 35851 828 13573 13945 56102;56103;56104 56102 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(103.7)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8518 2 663.852321 1325.69009 75371.16 0.99558 0.00066092 0.059812 3.9706E-05 1.0554 0.00070062 663.852368653005 668.361479768123 87.879 0.3008 87.879 87.674 87.974 0 43 21 4 0 0 0 9.3738E-06 2 54182 103.7 78.141 1 0.82589 0.87529 0 20348000 8918200 11430000 35852 828 13573 13945 56105;56106 56105 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(97.57)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8603 2 663.852321 1325.69009 73949.88 0.78145 0.00051877 0.66322 0.00044028 1.4447 0.00095904 663.852384729355 667.859892065891 94.07 1.2833 94.07 93.825 95.108 0 326 108 5 0 0 0 3.3773E-05 2 58759 97.565 97.565 1 0.71765 0.80187 0 92155000 53119000 39036000 35853 828 13573 13945 56107;56108 56107 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(114.5)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8522 2 663.852321 1325.69009 73947.96 1.0332 0.00068591 -0.044018 -2.9221E-05 0.98921 0.00065669 663.852338904125 667.859112161576 95.263 0.57055 95.263 95.108 95.679 0 240 48 7 0 0 0 2.3447E-08 1 59427 114.5 114.5 1 0.87825 0.98163 0 53234000 31143000 22091000 35854 828 13573 13945 56109 56109 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(79.97)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8599 2 663.852321 1325.69009 75161.37 0.75212 0.0004993 -0.36752 -0.00024398 0.3846 0.00025532 663.852169329412 667.859623613781 100.45 0.256 100.45 100.29 100.54 0 76 20 5 0 0 0 9.9806E-05 1 63040 79.974 79.974 1 0.92499 0.99026 0 23003000 11285000 11718000 35855 828 13573 13945 56110 56110 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(76.28)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8524 2 663.852321 1325.69009 74550.66 0.64406 0.00042756 -0.43939 -0.00029169 0.20467 0.00013587 663.851907721421 667.859101258105 101.21 1.047 101.21 100.54 101.59 0 248 83 4 0 0 0 9.0996E-05 3 63509 76.282 67.704 1 0.8036 0.82008 0 17182000 10566000 6616700 35856 828 13573 13945 56111;56112;56113 56111 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(87.91)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8599 2 663.852321 1325.69009 75389.31 0.85821 0.00056972 0.25263 0.00016771 1.1108 0.00073743 663.851791925908 667.859759702387 102.74 0.54443 102.74 102.59 103.14 0 130 43 4 0 0 0 0.00011359 2 64882 87.913 87.913 1 0.63225 0.66846 0 20145000 11009000 9136100 35857 828 13573 13945 56114;56115 56115 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(44.86)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8604 2 663.852321 1325.69009 74741.66 0.59255 0.00039336 -0.94293 -0.00062596 -0.35038 -0.0002326 663.851818361589 667.858311736734 110.88 0.66301 110.88 110.57 111.23 -7.6294E-06 131 49 6 0 0 0 0.0061219 1 71339 44.863 44.863 1 1.0495 1.0612 0 8790000 4299600 4490400 35858 828 13573 13945 56116 56116 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(68.66)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8595 2 663.852321 1325.69009 74964.78 0.37967 0.00025204 0.147 9.7585E-05 0.52667 0.00034963 663.852441367036 667.859390570313 142.9 1.5575 142.9 142.34 143.9 0 529 168 8 0 0 0 0.00028838 3 92134 68.657 61.713 1 0.86505 0.89252 0 9653200 5285500 4367700 35859 828 13573 13945 56117;56118;56119 56117 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(54.98)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8533 2 663.852321 1325.69009 NaN NaN NaN 1.4516 0.00096365 NaN NaN NaN NaN 85.339 0.63919 85.339 84.957 85.596 0 0 0 0 0.003048 1 52411 54.982 34.08 1 NaN NaN 0 7239300 7239300 0 35860 828 13573 13945 56120 56120 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(134.25)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8522 2 663.852321 1325.69009 NaN NaN NaN 0.54015 0.00035858 NaN NaN NaN NaN 89.301 1.6149 89.301 88.949 90.564 0 0 0 0 2.2675E-20 1 55022 134.25 106.07 1 NaN NaN 0 8752900000 8752900000 0 35861 828 13573 13945 56121 56121 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(61.65)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8523 2 663.852321 1325.69009 NaN NaN NaN 0.0010177 6.7559E-07 NaN NaN NaN NaN 97.473 1.5865 97.473 96.527 98.114 0 0 0 0 0.0017799 1 60855 61.65 41.863 1 NaN NaN 0 33845000 33845000 0 35862 828 13573 13945 56122 56122 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(87.26)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8522 2 663.852321 1325.69009 NaN NaN NaN 0.019432 1.29E-05 NaN NaN NaN NaN 98.197 1.0331 98.197 97.932 98.965 0 0 0 0 0.00018549 1 61383 87.258 60.143 1 NaN NaN 0 24587000 24587000 0 35863 828 13573 13945 56123 56123 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(79.15)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8606 2 663.852321 1325.69009 NaN NaN NaN -0.28453 -0.00018889 NaN NaN NaN NaN 105.97 0.82157 105.97 105.39 106.21 0 0 0 0 0.00041821 2 67452 79.148 57.553 1 NaN NaN 0 7528400 0 7528400 35864 828 13573 13945 56124;56125 56124 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(183.78)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8599 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.875 1 89.875 89.375 90.375 0 0 0 0 1.4178E-58 1 55530 183.78 135.5 1 35865 828 13573 13945 56126 56126 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(116.52)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8526 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.92 1 89.92 89.42 90.42 0 0 0 0 2.791E-11 1 55554 116.52 90.412 1 35866 828 13573 13945 56127 56127 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(140.75)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8601 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.282 1 95.282 94.782 95.782 0 0 0 0 6.0921E-24 1 59306 140.75 93.862 1 35867 828 13573 13945 56128 56128 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(98.05)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8599 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.384 1 96.384 95.884 96.884 0 0 0 0 6.2209E-07 1 60109 98.048 61.355 1 35868 828 13573 13945 56129 56129 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(96.14)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8537 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.56 1 96.56 96.06 97.06 0 0 0 0 7.4265E-07 1 60227 96.143 67.744 1 35869 828 13573 13945 56130 56130 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(95.52)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8602 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.602 1 97.602 97.102 98.102 7.6294E-06 0 0 0 7.8186E-07 1 60996 95.523 66.796 1 35870 828 13573 13945 56131 56131 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(44.43)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8603 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.39 1 104.39 103.89 104.89 -7.6294E-06 0 0 0 0.015784 1 66139 44.425 28.222 1 35871 828 13573 13945 56132 56132 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(61.59)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.859 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.14 1 105.14 104.64 105.64 0 0 0 0 0.0030801 1 66718 61.593 29.659 1 35872 828 13573 13945 56133 56133 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(41.54)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.8603 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.99 1 108.99 108.49 109.49 7.6294E-06 0 0 0 0.026588 1 69872 41.54 20.638 1 35873 828 13573 13945 56134 56134 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(58.7)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8511 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.47 1 110.47 109.97 110.97 -7.6294E-06 0 0 0 0.0039418 1 71114 58.699 35.271 1 35874 828 13573 13945 56135 56135 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(55.57)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8514 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.26 1 128.26 127.76 128.76 0 0 0 0 0.0058024 1 85715 55.567 26.48 1 35875 828 13573 13945 56136 56136 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(43.31)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8521 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.67 1 132.67 132.17 133.17 0 0 0 0 0.019968 1 88916 43.308 21.844 1 35876 828 13573 13945 56137 56137 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(96.14)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.3693 2 663.852321 1325.69009 75161.38 0.98115 0.00065134 -0.14829 -9.8442E-05 0.83286 0.0005529 663.85231723184 667.859270750931 95.923 0.44417 95.923 95.597 96.041 0 90 35 3 0 0 0 0.00059576 1 59572 96.143 96.143 1 0.98835 1.1138 0 60093000 37422000 22671000 35877 828 13573 13945 56138 56138 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(102.06)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.853 2 663.852321 1325.69009 NaN NaN NaN -0.18983 -0.00012602 NaN NaN NaN NaN 103.68 2.0361 103.68 103.09 105.13 0 0 0 0 5.0664E-06 2 59344 102.06 70.506 1 NaN NaN 0 1345500000 1345500000 0 35878 828 13573 13945 56139;56140 56140 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(136.63)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.8526 2 663.852321 1325.69009 NaN NaN NaN -0.040467 -2.6864E-05 NaN NaN NaN NaN 105.55 3.1044 105.55 105.11 108.22 -7.6294E-06 0 0 0 1.6866E-20 5 61018 136.63 108.89 1 NaN NaN 0 1203900000 1203900000 0 35879 828 13573 13945 56141;56142;56143;56144;56145 56143 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(76.28)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.853 2 663.852321 1325.69009 NaN NaN NaN 0.087811 5.8293E-05 NaN NaN NaN NaN 108.94 4.2399 108.94 108.22 112.45 0 0 0 0 0.00049642 5 63392 76.282 56.495 1 NaN NaN 0 18156000 18156000 0 35880 828 13573 13945 56146;56147;56148;56149;56150 56147 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(58.37)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.8524 2 663.852321 1325.69009 NaN NaN NaN -0.58091 -0.00038564 NaN NaN NaN NaN 114.37 1.8274 114.37 113.62 115.45 0 0 0 0 0.0023412 2 66652 58.37 38.583 1 NaN NaN 0 3216900 3216900 0 35881 828 13573 13945 56151;56152 56151 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(58.37)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.8594 2 663.852321 1325.69009 NaN NaN NaN -0.73093 -0.00048523 NaN NaN NaN NaN 120.93 0.50225 120.93 120.62 121.12 0 0 0 0 0.0023412 1 71886 58.37 38.583 1 NaN NaN 0 1770000 0 1770000 35882 828 13573 13945 56153 56153 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(58.37)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.86 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.51 1 107.51 107.01 108.01 7.6294E-06 0 0 0 0.0040399 1 61610 58.37 29.971 1 35883 828 13573 13945 56154 56154 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(98.05)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.8614 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.29 1 108.29 107.79 108.79 0 0 0 0 6.2209E-07 1 62178 98.048 61.355 1 35884 828 13573 13945 56155 56155 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(61.35)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.86 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.07 1 109.07 108.57 109.57 0 0 0 0 0.0031516 1 62771 61.353 34.839 1 35885 828 13573 13945 56156 56156 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(78.66)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.8596 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.89 1 109.89 109.39 110.39 -7.6294E-06 0 0 0 0.00026102 1 63393 78.655 52.141 1 35886 828 13573 13945 56157 56157 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(107.21)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.86 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.7 1 110.7 110.2 111.2 0 0 0 0 4.2712E-08 1 64007 107.21 59.382 1 35887 828 13573 13945 56158 56158 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(67.73)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.8602 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.48 1 111.48 110.98 111.98 0 0 0 0 0.0012543 1 64613 67.726 47.396 1 35888 828 13573 13945 56159 56159 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(48.98)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.8594 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.26 1 112.26 111.76 112.76 0 0 0 0 0.011161 1 65183 48.981 32.778 1 35889 828 13573 13945 56160 56160 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(61.35)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.8605 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.06 1 113.06 112.56 113.56 0 0 0 0 0.0031516 1 65800 61.353 34.839 1 35890 828 13573 13945 56161 56161 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(48.44)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.8604 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.97 1 113.97 113.47 114.47 0 0 0 0 0.011602 1 66496 48.44 21.325 1 35891 828 13573 13945 56162 56162 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(41.7)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.8595 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.93 1 114.93 114.43 115.43 0 0 0 0 0.025972 1 67248 41.704 20.803 1 35892 828 13573 13945 56163 56163 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(57.53)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.86 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.02 1 118.02 117.52 118.52 0 0 0 0 0.0042894 1 69630 57.532 31.018 1 35893 828 13573 13945 56164 56164 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(61.35)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.8531 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.37 1 118.37 117.87 118.87 7.6294E-06 0 0 0 0.0031516 1 69901 61.353 40.452 1 35894 828 13573 13945 56165 56165 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(40.73)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.8523 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.94 1 119.94 119.44 120.44 7.6294E-06 0 0 0 0.02963 1 71118 40.727 12.329 1 35895 828 13573 13945 56166 56166 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(96.14)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.8594 2 663.852321 1325.69009 72927.27 0.67915 0.00045085 0.25063 0.00016638 0.92978 0.00061724 664.353709293287 667.859442445913 109 5.0066 109 107.32 112.32 7.6294E-06 1048 264 6 0 0 0 4.5536E-05 6 62906 96.143 81.205 1 0.7524 0.60643 0 23068000 10756000 12312000 35896 828 13573 13945 56167;56168;56169;56170;56171;56172 56170 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(61.35)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.8529 2 663.852321 1325.69009 74769.95 0.75849 0.00050353 -0.70172 -0.00046584 0.056773 3.7689E-05 663.852076317004 667.85884013455 119.81 1.3255 119.81 119.06 120.39 0 179 59 5 0 0 0 0.00065617 1 70068 61.353 61.353 1 0.75252 0.61377 0 5837800 2687100 3150700 35897 828 13573 13945 56173 56173 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(57.35)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.8597 2 663.852321 1325.69009 73905.51 0.79023 0.0005246 -0.62409 -0.0004143 0.16614 0.00011029 664.353443332732 667.858645587278 120.51 0.64095 120.51 120.3 120.95 -7.6294E-06 148 34 6 0 0 0 0.0014176 1 70771 57.348 57.348 1 0.70024 0.57204 0 5614500 3025600 2588900 35898 828 13573 13945 56174 56174 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(72.01)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.8526 2 663.852321 1325.69009 NaN NaN NaN 0.092746 6.1569E-05 NaN NaN NaN NaN 103.56 2.0624 103.56 102.88 104.94 0 0 0 0 0.0006131 2 57850 72.006 51.104 1 NaN NaN 0 914240000 914240000 0 35899 828 13573 13945 56175;56176 56175 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(136.32)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.8528 2 663.852321 1325.69009 NaN NaN NaN -0.089197 -5.9214E-05 NaN NaN NaN NaN 105.4 7.3811 105.4 104.92 112.3 -7.6294E-06 0 0 0 1.762E-20 10 60015 136.32 104.95 1 NaN NaN 0 1208300000 1208300000 0 35900 828 13573 13945 56177;56178;56179;56180;56181;56182;56183;56184;56185;56186 56179 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(40.5)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.8597 2 663.852321 1325.69009 NaN NaN NaN 0.388 0.00025757 NaN NaN NaN NaN 117.42 1.4951 117.42 116.66 118.16 0 0 0 0 0.019066 1 68576 40.496 20.71 1 NaN NaN 0 2051400 0 2051400 35901 828 13573 13945 56187 56187 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(57.53)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.8603 2 663.852321 1325.69009 NaN NaN NaN -0.12268 -8.1443E-05 NaN NaN NaN NaN 118.68 1.2689 118.68 117.93 119.2 7.6294E-06 0 0 0 0.0024846 1 69190 57.532 38.752 1 NaN NaN 0 2354600 0 2354600 35902 828 13573 13945 56188 56188 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(58.37)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 667.8597 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.05 1 113.05 112.55 113.55 -7.6294E-06 0 0 0 0.0040399 1 64882 58.37 38.041 1 35903 828 13573 13945 56189 56189 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(62.3)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.8527 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.24 1 113.24 112.74 113.74 0 0 0 0 0.0028689 1 65025 62.303 41.401 1 35904 828 13573 13945 56190 56190 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(57.53)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.8525 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.02 1 114.02 113.52 114.52 0 0 0 0 0.0042894 1 65617 57.532 27.722 1 35905 828 13573 13945 56191 56191 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(48.28)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.8533 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.8 1 114.8 114.3 115.3 7.6294E-06 0 0 0 0.011729 1 66232 48.284 19.885 1 35906 828 13573 13945 56192 56192 656 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(40.59)DVVYALK 0 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.8538 2 663.852321 1325.69009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.43 1 116.43 115.93 116.93 0 0 0 0 0.030148 1 67489 40.589 18.503 1 35907 828 13573 13945 56193 56193 656 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.862 2 655.854864 1309.69517 71780.5 0.95716 0.00062776 0.2601 0.00017059 1.2173 0.00079834 655.856030010507 659.86216245885 110.08 2.7321 110.08 109.56 112.29 0 1183 195 12 0 0 0 4.8395E-08 8 69482 114.5 102.26 1 0.57702 0.70752 0 4238600000 2664400000 1574200000 35908 828 13573 13946 56194;56195;56196;56197;56198;56199;56200;56201 56196 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8513 2 655.854864 1309.69517 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.599 1 60.599 60.099 61.099 0 0 0 0 0.0086652 1 34586 58.592 25.986 1 35909 828 13573 13946 56202 56202 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.8625 2 655.854864 1309.69517 71743.89 0.71302 0.00046764 0.027341 1.7932E-05 0.74036 0.00048557 655.855719351254 659.861994391706 109.46 2.7069 109.46 108.98 111.69 0 1086 188 12 0 0 0 6.4029E-09 7 70723 123.88 111.65 1 0.59632 0.70644 0 2878200000 1805800000 1072400000 35910 828 13573 13946 56203;56204;56205;56206;56207;56208;56209 56205 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.8559 2 655.854864 1309.69517 75932.98 1.0105 0.00066272 -0.063998 -4.1973E-05 0.94647 0.00062075 655.85499356527 660.363070901884 111.92 0.35691 111.92 111.69 112.04 0 69 25 4 0 0 0 0.00059524 1 72305 68.657 68.657 1 0.53759 0.53427 0 5780300 2485800 3294500 35911 828 13573 13946 56210 56210 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.8623 2 655.854864 1309.69517 77720.56 0.79262 0.00051984 0.50614 0.00033195 1.2988 0.00085179 655.854735781403 659.86242575686 106.41 0.57375 106.41 106.1 106.68 0 96 30 5 0 0 0 0.031274 1 60786 35.71 35.71 1 1.0961 0.91373 0 1779400 691390 1088000 35912 828 13573 13946 56211 56211 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.8625 2 655.854864 1309.69517 72014.71 0.94418 0.00061925 -0.49711 -0.00032603 0.44708 0.00029322 655.856091825958 659.861841838516 121.47 5.8612 121.47 120.8 126.66 0 1312 261 12 0 0 0 0.00022668 12 73048 85.807 84.17 1 0.95604 0.88515 0 2205500000 1148600000 1057000000 35913 828 13573 13946 56212;56213;56214;56215;56216;56217;56218;56219;56220;56221;56222;56223 56214 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.8623 2 655.854864 1309.69517 76170.82 1.1685 0.00076635 -1.6204 -0.0010628 -0.45193 -0.0002964 656.353578064201 659.861532881331 134.09 0.63443 134.09 133.67 134.3 0 82 27 5 0 0 0 0.01851 2 81750 40.727 20.966 1 0.54819 0.43398 0 4973200 2883500 2089700 35914 828 13573 13946 56224;56225 56225 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.8561 2 655.854864 1309.69517 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.94 1 126.94 126.44 127.44 0 0 0 0 0.050996 1 76450 42.395 15.28 1 35915 828 13573 13946 56226 56226 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.8559 2 655.854864 1309.69517 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.79 1 127.79 127.29 128.29 7.6294E-06 0 0 0 0.048361 1 77074 42.718 16.779 1 35916 828 13573 13946 56227 56227 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.863 2 655.854864 1309.69517 77670.24 0.67995 0.00044595 0.61551 0.00040369 1.2955 0.00084963 655.854838889593 659.862265425237 106.25 0.57473 106.25 105.88 106.45 0 92 32 4 0 0 0 0.016702 3 59761 42.001 42.001 1 1.2522 1.0156 0 2800900 1168500 1632500 35917 828 13573 13946 56228;56229;56230 56228 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.8629 2 655.854864 1309.69517 72842.76 0.82445 0.00054072 -0.46801 -0.00030695 0.35643 0.00023377 655.856158353471 659.861847078125 121.26 5.3243 121.26 120.42 125.74 7.6294E-06 1350 251 13 0 0 0 6.1466E-05 12 71870 98.048 90.676 1 0.89776 0.80266 0 1941700000 1018800000 922830000 35918 828 13573 13946 56231;56232;56233;56234;56235;56236;56237;56238;56239;56240;56241;56242 56235 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.863 2 655.854864 1309.69517 76655.21 0.90317 0.00059235 -0.15437 -0.00010125 0.7488 0.0004911 655.854725550148 659.861814979984 128.44 1.216 128.44 127.96 129.18 0 116 50 5 0 0 0 0.022815 3 76993 37.696 37.696 1 0.93387 0.80195 0 1401200 902600 498620 35919 828 13573 13946 56243;56244;56245 56245 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 656.3557 2 655.854864 1309.69517 75864.04 1.1915 0.00078147 -1.4694 -0.00096369 -0.27783 -0.00018222 656.354336342121 659.861884136103 134.02 0.83601 134.02 133.76 134.59 0 132 38 6 0 0 0 0.01851 2 80839 40.727 20.966 1 0.3943 0.30889 0 3342400 2350400 992000 35920 828 13573 13946 56246;56247 56247 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.8622 2 655.854864 1309.69517 NaN NaN NaN 0.77783 0.00051014 NaN NaN NaN NaN 120.58 0.43219 120.58 120.42 120.85 0 0 0 0 0.019898 1 70711 51.268 31.481 1 NaN NaN 0 1359500 0 1359500 35921 828 13573 13946 56248 56248 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.8558 2 655.854864 1309.69517 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.68 0.99999 127.68 127.18 128.18 -7.6294E-06 0 0 0 0.054214 1 76101 42.001 21.099 1 35922 828 13573 13946 56249 56249 TVTAMDVVYALKR 13 1 1 Oxidation (M) _TVTAM(ox)DVVYALKR_ TVTAM(1)DVVYALKR TVTAM(50.56)DVVYALKR 0 1 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.9381 3 494.937676 1481.7912 86590.55 0.19327 9.5656E-05 -0.04156 -2.057E-05 0.15171 7.5086E-05 494.937589097364 500.94512534482 78.294 0.87216 78.294 77.9 78.772 0 313 73 6 0 0 0 0.0011036 1 46230 50.562 50.562 1 0.91967 1.0879 0 39104000 18626000 20477000 35923 828 13574 13947 56250 56250 656 TVTAMDVVYALKR 13 1 1 Oxidation (M) _TVTAM(ox)DVVYALKR_ TVTAM(1)DVVYALKR TVTAM(50.9)DVVYALKR 0 1 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 494.9377 3 494.937676 1481.7912 86102.7 0.10992 5.4406E-05 0.13372 6.6183E-05 0.24364 0.00012059 494.93766049447 500.94528961644 77.085 0.89158 77.085 76.772 77.663 0 259 73 7 0 0 0 0.0010755 1 46489 50.897 50.897 1 0.89173 1.0383 0 42485000 24501000 17984000 35924 828 13574 13947 56251 56251 656 TVTAMDVVYALKR 13 1 1 Oxidation (M) _TVTAM(ox)DVVYALKR_ TVTAM(1)DVVYALKR TVTAM(46.48)DVVYALKR 0 1 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.9453 3 494.937676 1481.7912 85450.39 0.038683 1.9146E-05 0.34266 0.00016959 0.38134 0.00018874 494.937856620562 500.945233968041 78.494 0.83846 78.494 78.103 78.941 7.6294E-06 329 72 6 0 0 0 0.0021185 1 47415 46.481 46.481 1 0.97305 1.1384 0 51856000 28020000 23836000 35925 828 13574 13947 56252 56252 656 TVTAMDVVYALKR 13 1 1 Oxidation (M) _TVTAM(ox)DVVYALKR_ TVTAM(1)DVVYALKR TVTAM(42.21)DVVYALKR 0 1 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 494.9377 3 494.937676 1481.7912 86030.62 0.37299 0.0001846 -0.1072 -5.3056E-05 0.26579 0.00013155 494.937615524144 500.945112279303 91.624 1.2077 91.624 90.98 92.188 0 256 80 5 0 0 0 0.0034143 1 50939 42.209 42.209 1 0.58748 0.48211 0 4570000 2643100 1926900 35926 828 13574 13947 56253 56253 656 TVTAMDVVYALKR 13 1 1 Oxidation (M) _TVTAM(ox)DVVYALKR_ TVTAM(1)DVVYALKR TVTAM(40.07)DVVYALKR 0 1 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.9384 3 494.937676 1481.7912 86227.49 0.1107 5.4788E-05 -0.39801 -0.00019699 -0.28731 -0.0001422 494.937600434619 500.945201201981 91.349 0.76309 91.349 91.103 91.866 0 202 52 6 0 0 0 0.0040644 1 49904 40.066 40.066 1 0.55357 0.46618 0 4166000 1915000 2251000 35927 828 13574 13947 56254 56254 656 TVTAMDVVYALKR 13 1 1 Unmodified _TVTAMDVVYALKR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.6054 3 489.606038 1465.79629 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.581 1 95.581 95.081 96.081 0 0 0 0 0.023039 1 59527 33.204 11.974 1 35928 828 13574 13948 56255 56255 TVTAMDVVYALKR 13 1 1 Unmodified _TVTAMDVVYALKR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.9409 3 489.606038 1465.79629 86223.45 0.34205 0.00016747 0.23399 0.00011456 0.57603 0.00028203 489.605999048976 495.613717140538 109.66 0.74798 109.66 109.33 110.07 0 147 35 5 0 0 0 0.0062102 2 63330 26.541 23.832 1 1.1872 0.99843 0 7201900 3623200 3578800 35929 828 13574 13948 56256;56257 56257 TVTAMDVVYALKR 13 1 1 Unmodified _TVTAMDVVYALKR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.9069 2 733.905419 1465.79629 NaN NaN NaN 0.15543 0.00011407 NaN NaN NaN NaN 109.65 0.48717 109.65 109.41 109.89 0 0 0 0 0.002077 1 63168 72.006 39.997 1 NaN NaN 0 1649000 1649000 0 35930 828 13574 13948 56258 56258 TVTAMDVVYALKR 13 1 1 Unmodified _TVTAMDVVYALKR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.6064 3 489.606038 1465.79629 86545.33 0.38447 0.00018824 -0.062819 -3.0756E-05 0.32165 0.00015748 489.605978860092 495.613644583184 109.42 0.72868 109.42 109.18 109.91 0 122 33 5 0 0 0 0.0024703 1 62054 39.006 39.006 1 1.0851 0.91044 0 6485100 2951800 3533300 35931 828 13574 13948 56259 56259 TVTAMDVVYALKR 13 1 1 Unmodified _TVTAMDVVYALKR_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.4066 2 733.905419 1465.79629 73732.79 0.80107 0.00058791 0.2931 0.0002151 1.0942 0.00080301 733.905258372157 742.917396442772 109.44 0.55756 109.44 109.18 109.74 7.6294E-06 91 24 6 0 0 0 0.00031855 1 62085 70.977 66.823 1 0.91824 0.78062 0 3206300 1532000 1674300 35932 828 13574 13948 56260 56260 TVTCLCLSSSGQR 13 0 1 Unmodified _TVTCLCLSSSGQR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.8477 2 734.847775 1467.681 72929.48 0.5286 0.00038844 0.80032 0.00058812 1.3289 0.00097656 734.848450964625 739.852757768591 53.18 0.69807 53.18 52.76 53.458 0 130 53 4 0 0 0 0.0036801 3 29538 59.542 37.532 1 1.1647 1.1858 0 30022000 7730000 22292000 35933 1936 13575 13949 56261;56262;56263 56261 TVTCLCLSSSGQR 13 0 1 Unmodified _TVTCLCLSSSGQR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.847 2 734.847775 1467.681 NaN NaN NaN 0.59695 0.00043867 NaN NaN NaN NaN 51.736 0.70671 51.736 51.543 52.25 0 0 0 0 0.0019329 1 29327 72.652 43.925 1 NaN NaN 0 10245000 10245000 0 35934 1936 13575 13949 56264 56264 TVTCLCLSSSGQR 13 0 1 Unmodified _TVTCLCLSSSGQR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.8519 2 734.847775 1467.681 71752.73 0.55583 0.00040845 -0.61233 -0.00044997 -0.056496 -4.1516E-05 734.84756795201 739.851578118969 60.998 0.74354 60.998 60.753 61.497 3.8147E-06 222 60 6 0 0 0 0.0029807 2 31119 58.676 58.676 1 1.1901 0.99429 0 3338000 1483500 1854500 35935 1936 13575 13949 56265;56266 56265 TVTCLCLSSSGQR 13 0 1 Unmodified _TVTCLCLSSSGQR_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 739.8525 2 734.847775 1467.681 71872.76 0.5064 0.00037213 -0.31266 -0.00022976 0.19374 0.00014237 734.847611295792 739.851796896019 61.558 0.88698 61.558 61.251 62.138 0 251 67 5 0 0 0 0.0042165 6 31043 58.676 32.848 1 1.2283 1.0857 0 1899500 940950 958520 35936 1936 13575 13949 56267;56268;56269;56270;56271;56272 56271 TVTELVTK 8 1 0 Unmodified _TVTELVTK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 449.7703 2 445.7633 889.512048 91557.21 -0.055838 -2.489E-05 0.23618 0.00010528 0.18035 8.0392E-05 445.763386160209 449.770394454606 39.707 0.83783 39.707 39.484 40.321 0 275 70 6 0 0 0 0.025194 1 20598 55.37 18.8 1 0.94467 1.0187 0 37548000 18957000 18591000 35937 1898 13576 13950 56273 56273 TVTELVTK 8 1 0 Unmodified _TVTELVTK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.7705 2 445.7633 889.512048 90907.87 -0.064648 -2.8818E-05 0.27809 0.00012396 0.21345 9.5147E-05 445.763375725046 449.770471419565 38.729 0.83216 38.729 38.499 39.331 0 269 71 5 0 0 0 0.026199 1 20514 54.712 14.614 1 0.9894 1.1145 0 59002000 27749000 31253000 35938 1898 13576 13950 56274 56274 TVTLGGDVFDPHGTLSGGAR 20 0 1 Unmodified _TVTLGGDVFDPHGTLSGGAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.9974 3 652.997311 1955.9701 73173.45 0.68898 0.0004499 -0.13969 -9.122E-05 0.54929 0.00035868 652.997238627904 656.333400566773 88.343 1.3491 88.343 87.751 89.101 7.6294E-06 750 107 10 0 0 0 3.6126E-13 3 53599 101.49 101.49 1 0.82827 0.98087 0 409710000 217380000 192330000 35939 69 13577 13951 56275;56276;56277 56277 TVTLGGDVFDPHGTLSGGAR 20 0 1 Unmodified _TVTLGGDVFDPHGTLSGGAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.9915 2 978.992328 1955.9701 62358.3 0.25285 0.00024754 0.32212 0.00031535 0.57497 0.00056289 979.49452717714 983.996287216765 88.284 0.58635 88.284 88.057 88.643 0 116 44 6 0 0 0 1.0641E-07 1 53151 104.09 104.09 1 0.88502 0.93732 0 41363000 20441000 20921000 35940 69 13577 13951 56278 56278 TVTLGGDVFDPHGTLSGGAR 20 0 1 Unmodified _TVTLGGDVFDPHGTLSGGAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.4705 2 978.992328 1955.9701 62952.82 0.05757 5.636E-05 0.57385 0.00056179 0.63142 0.00061815 979.494494459361 984.498172515388 88.488 0.33134 88.488 88.406 88.738 0 81 26 5 0 0 0 0.015352 1 53369 34.432 19.045 1 0.76258 0.77558 0 29645000 13089000 16556000 35941 69 13577 13951 56279 56279 TVTLGGDVFDPHGTLSGGAR 20 0 1 Unmodified _TVTLGGDVFDPHGTLSGGAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.3336 3 652.997311 1955.9701 73544.47 0.72421 0.0004729 -0.44261 -0.00028902 0.2816 0.00018388 653.331288359845 656.333170600726 87.399 0.95878 87.399 87.044 88.002 0 513 75 10 0 0 0 6.9993E-18 2 53712 102.33 102.33 1 0.80545 0.93838 0 453460000 241260000 212190000 35942 69 13577 13951 56280;56281 56280 TVTLGGDVFDPHGTLSGGAR 20 0 1 Unmodified _TVTLGGDVFDPHGTLSGGAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 979.4933 2 978.992328 1955.9701 61972.35 0.23652 0.00023155 0.38644 0.00037832 0.62296 0.00060987 979.493766215001 983.996809926182 87.438 0.51988 87.438 87.127 87.647 0 180 42 6 0 0 0 1.0475E-06 1 53757 86.944 86.944 1 0.84903 0.95022 0 44900000 24437000 20464000 35943 69 13577 13951 56282 56282 TVTLGGDVFDPHGTLSGGAR 20 0 1 Unmodified _TVTLGGDVFDPHGTLSGGAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.3339 3 652.997311 1955.9701 73723.37 0.55813 0.00036446 -0.031942 -2.0858E-05 0.52619 0.0003436 653.331581780039 656.333422401714 100.84 1.6082 100.84 100.48 102.09 0 808 110 13 0 0 0 2.421E-09 7 57382 70.453 70.453 1 1.7591 1.5218 0 122820000 45983000 76833000 35944 69 13577 13951 56283;56284;56285;56286;56287;56288;56289 56286 TVTLGGDVFDPHGTLSGGAR 20 0 1 Unmodified _TVTLGGDVFDPHGTLSGGAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 979.4914 2 978.992328 1955.9701 61261.31 -0.0069693 -6.8229E-06 0.26144 0.00025595 0.25447 0.00024912 979.494076419979 983.996959059522 100.87 0.76991 100.87 100.57 101.34 0 276 52 8 0 0 0 0.020479 1 56986 18.596 18.596 1 1.7181 1.4075 0 12909000 5110100 7798700 35945 69 13577 13951 56290 56290 TVTLGGDVFDPHGTLSGGAR 20 0 1 Unmodified _TVTLGGDVFDPHGTLSGGAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.3359 3 652.997311 1955.9701 73974.86 0.52399 0.00034217 -0.069359 -4.5291E-05 0.45463 0.00029687 652.997339732985 656.333435909716 100.66 1.8203 100.66 100.26 102.08 7.6294E-06 799 130 12 0 0 0 4.2631E-07 6 56345 55.206 55.206 1 1.7362 1.5159 0 128380000 46785000 81600000 35946 69 13577 13951 56291;56292;56293;56294;56295;56296 56293 TVTLGGDVFDPHGTLSGGAR 20 0 1 Unmodified _TVTLGGDVFDPHGTLSGGAR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 979.494 2 978.992328 1955.9701 61795.19 0.076746 7.5134E-05 0.1319 0.00012913 0.20865 0.00020427 978.992461355359 983.996563248983 100.67 0.81319 100.67 100.39 101.21 0 329 56 8 0 0 0 7.7593E-06 2 56034 57.414 57.414 1 1.6543 1.3463 0 12464000 5191600 7272200 35947 69 13577 13951 56297;56298 56298 TVTNAVVTVPAYFNDSQR 18 0 1 Unmodified _TVTNAVVTVPAYFNDSQR_ 0 0 0 E9PN89;V9HW22;P11142;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 991.5029 2 991.502529 1980.9905 61328.79 0.39738 0.00039401 0.33084 0.00032803 0.72822 0.00072203 992.004435649608 997.00842871936 99.987 1.116 99.987 99.499 100.61 -7.6294E-06 600 95 9 0 0 0 1.3103E-05 5 61051 77.644 70.763 1 1.3413 1.5643 0 193710000 86554000 107150000 35948 1467;1248 13578 13952 56299;56300;56301;56302;56303 56301 TVTNAVVTVPAYFNDSQR 18 0 1 Unmodified _TVTNAVVTVPAYFNDSQR_ 0 0 0 E9PN89;V9HW22;P11142;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 992.0046 2 991.502529 1980.9905 60939.63 0.50469 0.0005004 0.094333 9.3532E-05 0.59902 0.00059393 991.502674182974 996.506733531667 99.198 1.0102 99.198 98.863 99.874 0 553 83 10 0 0 0 3.6734E-05 4 62011 62.088 62.088 1 1.3823 1.59 0 206420000 82618000 123800000 35949 1467;1248 13578 13952 56304;56305;56306;56307 56306 TVTNAVVTVPAYFNDSQR 18 0 1 Unmodified _TVTNAVVTVPAYFNDSQR_ 0 0 0 E9PN89;V9HW22;P11142;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 991.5028 2 991.502529 1980.9905 NaN NaN NaN 0.1406 0.00013941 NaN NaN NaN NaN 99.768 0.076279 99.768 99.743 99.819 0 0 0 0 0.022076 1 62606 37.613 26.883 1 NaN NaN 0 3583600 3583600 0 35950 1467;1248 13578 13952 56308 56308 TVTNAVVTVPAYFNDSQR 18 0 1 Unmodified _TVTNAVVTVPAYFNDSQR_ 0 0 0 E9PN89;V9HW22;P11142;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 991.4993 2 991.502529 1980.9905 61017.92 0.57097 0.00056612 -0.1962 -0.00019453 0.37477 0.00037159 992.003601465461 996.506575265245 112.5 0.95863 112.5 112.13 113.09 0 383 48 13 0 0 0 2.0125E-05 2 65193 72.705 67.904 1 1.4001 1.2047 0 51520000 22440000 29080000 35951 1467;1248 13578 13952 56309;56310 56310 TVTNAVVTVPAYFNDSQR 18 0 1 Unmodified _TVTNAVVTVPAYFNDSQR_ 0 0 0 E9PN89;V9HW22;P11142;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PI65 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 997.0063 2 991.502529 1980.9905 60808.62 0.28781 0.00028536 0.1608 0.00015943 0.44861 0.0004448 991.502681449756 996.506848544162 112.34 1.0822 112.34 111.94 113.03 -7.6294E-06 372 54 13 0 0 0 6.7984E-05 3 64690 52.576 47.297 1 1.3905 1.2131 0 51695000 20644000 31051000 35952 1467;1248 13578 13952 56311;56312;56313 56312 TVTSATIVYHLAR 13 0 1 Unmodified _TVTSATIVYHLAR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;A0A059XBJ1;A0A059XAL2;A0A059XAJ5;A0A059XG67;A0A059X4U2 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.353 2 716.401358 1430.78816 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.293 1 70.293 69.793 70.793 0 0 0 0 0.050423 1 41959 41.399 24.729 1 35953 231 13579 13953 56314 56314 TVTSILYPLLR 11 0 1 Unmodified _TVTSILYPLLR_ 0 0 0 A0A0D9SFM0;Q149N8;B3KX98 A0A0D9SFM0 A0A0D9SFM0 SHPRH E3 ubiquitin-protein ligase SHPRH ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.8931 2 638.387188 1274.75982 NaN NaN NaN -0.022069 -1.4089E-05 NaN NaN NaN NaN 120.81 0.54561 120.81 120.57 121.12 0 0 0 0 0.012027 1 77881 56.563 18.27 1 NaN NaN 0 3164000 0 3164000 35954 527 13580 13954 56315 56315 TVTSILYPLLR 11 0 1 Unmodified _TVTSILYPLLR_ 0 0 0 A0A0D9SFM0;Q149N8;B3KX98 A0A0D9SFM0 A0A0D9SFM0 SHPRH E3 ubiquitin-protein ligase SHPRH MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.3922 2 638.387188 1274.75982 77964.23 0.84906 0.00054203 0.030034 1.9174E-05 0.87909 0.0005612 638.387144413459 643.391332961824 133.39 0.53052 133.39 133.14 133.67 0 103 22 6 0 0 0 0.0012773 1 81176 68.735 68.735 1 1.6514 1.433 0 2428100 1061600 1366500 35955 527 13580 13954 56316 56316 TVTSILYPLLR 11 0 1 Unmodified _TVTSILYPLLR_ 0 0 0 A0A0D9SFM0;Q149N8;B3KX98 A0A0D9SFM0 A0A0D9SFM0 SHPRH E3 ubiquitin-protein ligase SHPRH ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 643.3931 2 638.387188 1274.75982 NaN NaN NaN 0.28668 0.00018301 NaN NaN NaN NaN 132.99 0.82755 132.99 132.89 133.71 0 0 0 0 0.042579 1 80027 46.462 16.208 1 NaN NaN 0 1139800 0 1139800 35956 527 13580 13954 56317 56317 TVVEALFQR 9 0 1 Unmodified _TVVEALFQR_ 0 0 0 P57740 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.8063 2 531.800749 1061.58694 84953.66 0.72042 0.00038312 0.66096 0.0003515 1.3814 0.00073462 531.800978104915 536.804921030841 86.569 0.40983 86.569 86.438 86.847 -7.6294E-06 138 29 7 0 0 0 0.013346 1 52116 56.659 37.565 1 1.6422 1.7011 0 23006000 6926100 16080000 35957 1621 13581 13955 56318 56318 TVVPCDFGLSTEEILAADDK 20 1 0 Unmodified _TVVPCDFGLSTEEILAADDK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1094.5308 2 1090.52501 2179.03547 57915.21 0.74326 0.00081054 -0.2201 -0.00024003 0.52316 0.00057051 1091.0269037499 1095.03377340341 118.98 0.52909 118.98 118.78 119.31 0 164 32 7 0 0 0 2.4283E-06 2 76407 67.115 59.011 1 0.65271 0.64711 0 25917000 15071000 10846000 35958 1916 13582 13956 56319;56320 56320 TVVPCDFGLSTEEILAADDK 20 1 0 Unmodified _TVVPCDFGLSTEEILAADDK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1094.5325 2 1090.52501 2179.03547 57820.4 0.1376 0.00015005 -0.006376 -6.9532E-06 0.13122 0.0001431 1091.02719691297 1094.53254858303 118.62 0.57262 118.62 118.38 118.95 0 164 35 7 0 0 0 1.3974E-06 2 78117 75.764 67.66 1 0.66961 0.72599 0 22405000 12203000 10201000 35959 1916 13582 13956 56321;56322 56322 TVVPCDFGLSTEEILAADDK 20 1 0 Unmodified _TVVPCDFGLSTEEILAADDK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1091.0287 2 1090.52501 2179.03547 57621.23 0.0874 9.5312E-05 0.48448 0.00052834 0.57188 0.00062365 1091.02710145583 1095.03404231736 131.31 0.71828 131.31 131.05 131.77 0 204 33 10 0 0 0 6.6649E-06 2 79649 73.834 73.834 1 1.2738 1.0002 0 11303000 4844200 6458500 35960 1916 13582 13956 56323;56324 56323 TVVPCDFGLSTEEILAADDK 20 1 0 Unmodified _TVVPCDFGLSTEEILAADDK_ 0 0 0 Q8N9T8;A0A024R7C4;B4DUT2 Q8N9T8 Q8N9T8 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1094.5313 2 1090.52501 2179.03547 57534.88 0.38804 0.00042317 -0.045035 -4.9112E-05 0.34301 0.00037406 1091.026835932 1095.03374600762 131.14 0.73012 131.14 130.92 131.65 0 223 31 11 0 0 0 8.0054E-06 1 78718 49.595 44.316 1 1.3059 1.0485 0 14535000 6186800 8348400 35961 1916 13582 13956 56325 56325 TVVSGLVQFVPK 12 1 0 Unmodified _TVVSGLVQFVPK_ 0 0 0 A0A0S2Z4R1;P54577 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3873 2 637.379363 1272.74417 77181.88 0.5919 0.00037727 0.041114 2.6205E-05 0.63302 0.00040347 637.379218405015 641.386324910111 108.47 0.56825 108.47 108.17 108.74 0 134 37 5 0 0 0 0.00020601 3 69306 79.974 69.742 1 4.1805 4.2599 0 17036000 3268500 13768000 35962 567 13583 13957 56326;56327;56328 56326 TVVSGLVQFVPK 12 1 0 Unmodified _TVVSGLVQFVPK_ 0 0 0 A0A0S2Z4R1;P54577 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.3871 2 637.379363 1272.74417 78586.43 0.5234 0.0003336 0.53906 0.00034358 1.0625 0.00067719 637.379535183425 641.386600356675 120.52 0.36076 120.52 120.34 120.7 0 53 16 5 0 0 0 0.00095797 1 71548 63.283 52.526 1 2.316 1.871 0 2775100 615140 2160000 35963 567 13583 13957 56329 56329 TVVSGLVQFVPK 12 1 0 Unmodified _TVVSGLVQFVPK_ 0 0 0 A0A0S2Z4R1;P54577 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.3862 2 637.379363 1272.74417 77694.46 0.84331 0.00053751 0.10257 6.5379E-05 0.94588 0.00060289 637.379437863552 641.386109284605 120.24 0.37814 120.24 120.05 120.43 0 69 19 5 0 0 0 0.001682 1 70430 60.518 50.287 1 2.5205 2.0282 0 2505200 694210 1811000 35964 567 13583 13957 56330 56330 TVWIAR 6 0 1 Unmodified _TVWIAR_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 373.2211 2 373.221406 744.428259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.849 1 47.849 47.349 48.349 0 0 0 0 0.044593 1 25999 92.279 10.982 1 35965 1772;1918 13584 13958 56331 56331 TVYDADMDLTASEVSK 16 1 0 Oxidation (M) _TVYDADM(ox)DLTASEVSK_ TVYDADM(1)DLTASEVSK TVYDADM(90.73)DLTASEVSK 0 1 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 884.9048 2 880.898382 1759.78221 68836.16 0.36655 0.00032289 -0.45854 -0.00040393 -0.091995 -8.1038E-05 881.398960189893 884.905166052049 64.964 0.28957 64.964 64.837 65.127 -7.6294E-06 58 25 4 0 0 0 1.4314E-06 1 37355 90.731 87.306 1 1.0992 1.1044 0 5189300 2639800 2549500 35966 1795 13585 13959 56332 56332 1660 TVYDADMDLTASEVSK 16 1 0 Oxidation (M) _TVYDADM(ox)DLTASEVSK_ TVYDADM(1)DLTASEVSK TVYDADM(80.47)DLTASEVSK 0 1 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 884.9053 2 880.898382 1759.78221 NaN NaN NaN 0.73424 0.00064679 NaN NaN NaN NaN 63.964 0.1443 63.964 63.862 64.006 0 0 0 0 1.2485E-06 1 37600 80.469 67.892 1 NaN NaN 0 5261700 0 5261700 35967 1795 13585 13959 56333 56333 1660 TVYNLNDK 8 1 0 Unmodified _TVYNLNDK_ 0 0 0 P49916;B7Z6I3;K7ERZ5;K7EQB6 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.7488 2 483.748182 965.481811 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.837 1 29.837 29.337 30.337 0 0 0 0 0.018936 1 14484 68.224 29.432 1 35968 1589 13586 13960 56334 56334 TVYVELLPK 9 1 0 Unmodified _TVYVELLPK_ 0 0 0 Q4G0J3;D6RFF0 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.3165 2 531.3157 1060.61685 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.682 1 92.682 92.182 93.182 0 0 0 0 0.037478 1 56166 50.607 24.005 1 35969 1779 13587 13961 56335 56335 TVYVELLPK 9 1 0 Unmodified _TVYVELLPK_ 0 0 0 Q4G0J3;D6RFF0 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.9811 2 531.3157 1060.61685 NaN NaN NaN 6.6514E-05 3.534E-08 NaN NaN NaN NaN 91.87 0.22944 91.87 91.799 92.029 0 0 0 0 0.0366 2 56875 51.346 24.744 1 NaN NaN 0 5372500 5372500 0 35970 1779 13587 13961 56336;56337 56337 TWKPTLVILR 10 1 1 Unmodified _TWKPTLVILR_ 0 0 1 A4D275;O15143;C9JBJ7;C9K057;C9J4Z7;F8VXW2;C9JEY1;C9JQM8;C9JFG9;C9J6C8 A4D275 A4D275 ARPC1B Actin-related protein 2/3 complex subunit 1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 409.5921 3 409.592169 1225.75468 97986.14 0.38617 0.00015817 -0.33025 -0.00013527 0.055924 2.2906E-05 409.591975716613 415.599637894521 92.154 0.4315 92.154 92.007 92.438 0 83 36 4 0 0 0 0.028656 2 57146 34.692 27.804 1 1.8178 2.0105 0 7366800 2329000 5037800 35971 670 13588 13962 56338;56339 56339 TWNLVEGR 8 0 1 Unmodified _TWNLVEGR_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.7575 2 487.756341 973.498129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.309 1 64.309 63.809 64.809 0 0 0 0 0.034147 1 36952 60.91 39.61 1 35972 580 13589 13963 56340 56340 TWNLVEGR 8 0 1 Unmodified _TWNLVEGR_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.7568 2 487.756341 973.498129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.527 1 62.527 62.027 63.027 0 0 0 0 0.0034835 1 36677 95.909 64.62 1 35973 580 13589 13963 56341 56341 TWTQTYK 7 1 0 Unmodified _TWTQTYK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.2319 2 464.232168 926.449782 88183.16 0.14698 6.8233E-05 -0.059713 -2.7721E-05 0.087267 4.0512E-05 464.232008759957 468.239180481232 27.801 0.821 27.801 27.524 28.345 0 216 43 8 0 0 0 0.010632 2 12973 110.61 110.61 1 0.64267 0.75112 0 285100000 168030000 117070000 35974 1471 13590 13964 56342;56343 56343 TWTQTYK 7 1 0 Unmodified _TWTQTYK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 468.2392 2 464.232168 926.449782 87635.45 0.056756 2.6348E-05 -0.037353 -1.734E-05 0.019403 9.0077E-06 464.232076630542 468.239135920523 32.32 0.97522 32.32 31.999 32.974 0 299 48 11 0 0 0 0.012579 1 13852 105.2 96.255 1 1.3073 1.1232 0 85400000 36824000 48576000 35975 1471 13590 13964 56344 56344 TWTQTYK 7 1 0 Unmodified _TWTQTYK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.2393 2 464.232168 926.449782 87781.75 0.20333 9.4393E-05 -0.17362 -8.0601E-05 0.02971 1.3792E-05 464.232067601076 468.239075263116 32.326 0.8582 32.326 32.063 32.921 -3.8147E-06 277 41 9 0 0 0 0.028306 1 13388 72.138 57.725 1 1.3288 1.1193 0 53201000 22247000 30954000 35976 1471 13590 13964 56345 56345 TWTVVDAK 8 1 0 Unmodified _TWTVVDAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.2483 2 460.247818 918.481082 89350.16 0.083571 3.8464E-05 -0.083079 -3.8237E-05 0.00049272 2.2677E-07 460.247727866242 464.254735136155 52.538 1.3916 52.538 52.177 53.569 0 401 105 7 0 0 0 0.013465 3 29091 65.252 65.252 1 0.27404 0.31412 0 192840000 151860000 40984000 35977 1476 13591 13965 56346;56347;56348 56346 TWTVVDAK 8 1 0 Unmodified _TWTVVDAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.2475 2 460.247818 918.481082 90130.44 0.14902 6.8587E-05 -0.70706 -0.00032542 -0.55804 -0.00025684 460.247375518563 464.25449856291 51.194 1.4723 51.194 50.913 52.386 0 384 116 7 0 0 0 0.0085084 1 28922 78.324 57.665 1 0.3146 0.35198 0 108840000 81342000 27498000 35978 1476 13591 13965 56349 56349 TWTVVDAK 8 1 0 Unmodified _TWTVVDAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.2548 2 460.247818 918.481082 88201.08 0.17222 7.9264E-05 -0.57937 -0.00026665 -0.40715 -0.00018739 460.247478249138 464.254608004999 60.144 1.2947 60.144 59.756 61.051 0 358 99 6 0 0 0 0.031343 2 30691 51.346 50.703 1 0.2993 0.23218 0 14091000 11087000 3004000 35979 1476 13591 13965 56350;56351 56350 TWTVVDAK 8 1 0 Unmodified _TWTVVDAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 919.4886 1 919.488359 918.481082 NaN NaN NaN 0.57622 0.00052983 NaN NaN NaN NaN 60.143 0.40802 60.143 59.853 60.261 0 0 0 0 0.01031 1 30789 86.095 73.107 1 NaN NaN 0 1740700 1740700 0 35980 1476 13591 13965 56352 56352 TWTVVDAK 8 1 0 Unmodified _TWTVVDAK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 460.249 2 460.247818 918.481082 89269.03 -0.0144 -6.6274E-06 -0.34882 -0.00016054 -0.36322 -0.00016717 460.247658414529 464.254635749798 60.554 1.5825 60.554 60.156 61.739 0 392 130 5 0 0 0 0.034378 1 30185 49.442 49.442 1 0.29681 0.2452 0 11593000 8579500 3013100 35981 1476 13591 13965 56353 56353 TWYPVSIPAFYNPVTSLLKPVGEK 24 2 0 Unmodified _TWYPVSIPAFYNPVTSLLKPVGEK_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.1577 3 902.822902 2705.44688 64276.84 0.27367 0.00024708 0.96932 0.00087512 1.243 0.0011222 903.157930025709 908.502025705846 133.39 0.21361 133.39 133.29 133.5 0 14 5 5 0 0 0 1.1818E-05 1 87379 39.288 39.288 1 0.6719 0.79662 0 27645000 14310000 13336000 35982 1742 13592 13966 56354 56354 TWYPVSIPAFYNPVTSLLKPVGEK 24 2 0 Unmodified _TWYPVSIPAFYNPVTSLLKPVGEK_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.4925 3 902.822902 2705.44688 63800 0.04501 4.0636E-05 1.4285 0.0012897 1.4735 0.0013303 903.492291320192 908.502975779466 133.36 0.21729 133.36 133.26 133.48 0 23 5 9 0 0 0 8.9675E-06 1 89591 41.763 41.763 1 0.52214 0.60355 0 33119000 20596000 12523000 35983 1742 13592 13966 56355 56355 TYADYESVNECMEGVCK 17 1 0 Oxidation (M) _TYADYESVNECM(ox)EGVCK_ TYADYESVNECM(1)EGVCK TYADYESVNECM(99.5)EGVCK 0 1 0 A0A024R6D4;P84090;G3V279 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1036.408 2 1035.9081 2069.80164 60189.91 0.42656 0.00044188 -0.34152 -0.00035378 0.085046 8.81E-05 1035.90823062379 1040.41675523586 52.023 0.74786 52.023 51.762 52.51 0 331 57 9 0 0 0 3.2977E-08 3 28708 99.5 99.5 1 1.0806 1.1711 0 44327000 21798000 22529000 35984 201 13593 13967 56356;56357;56358 56357 160 TYADYESVNECMEGVCK 17 1 0 Oxidation (M) _TYADYESVNECM(ox)EGVCK_ TYADYESVNECM(1)EGVCK TYADYESVNECM(144.57)EGVCK 0 1 0 A0A024R6D4;P84090;G3V279 A0A024R6D4 A0A024R6D4 ERH Enhancer of rudimentary homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1039.9164 2 1035.9081 2069.80164 60056.84 0.36643 0.00037958 -0.19692 -0.00020399 0.1695 0.00017559 1036.40964833991 1040.41665783326 51.055 0.62247 51.055 50.793 51.415 3.8147E-06 288 48 8 0 0 0 1.353E-25 3 28808 144.57 144.57 1 1.0341 1.0855 0 34815000 16149000 18665000 35985 201 13593 13967 56359;56360;56361 56361 160 TYAICGAIR 9 0 1 Unmodified _TYAICGAIR_ 0 0 0 Q8WVC2;Q6FGH5;P63220;Q9BYK1 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.7701 2 512.765852 1023.51715 84049.02 0.63529 0.00032576 -0.099109 -5.082E-05 0.53618 0.00027494 512.765834254618 517.769899093184 56.054 0.92525 56.054 55.705 56.63 -3.8147E-06 323 75 6 0 0 0 0.0021719 1 31591 75.854 64.981 1 1.2314 1.3692 0 75300000 31548000 43752000 35986 1655 13594 13968 56362 56362 TYAICGAIR 9 0 1 Unmodified _TYAICGAIR_ 0 0 0 Q8WVC2;Q6FGH5;P63220;Q9BYK1 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.7659 2 512.765852 1023.51715 84383.73 0.33408 0.00017131 -0.13124 -6.7293E-05 0.20285 0.00010401 512.765787277379 517.769912109695 54.958 0.88842 54.958 54.659 55.547 0 301 69 6 0 0 0 0.0021719 2 31405 75.854 60.222 1 1.4009 1.6284 0 62927000 26478000 36449000 35987 1655 13594 13968 56363;56364 56363 TYDPSGDSTLPTCSK 15 1 0 Unmodified _TYDPSGDSTLPTCSK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.8663 2 814.85906 1627.70357 66821.33 0.71497 0.0005826 -0.24392 -0.00019876 0.47105 0.00038384 814.858984851295 818.86572522614 44.855 0.81926 44.855 44.56 45.379 0 387 73 8 0 0 0 4.8351E-22 2 24149 144.47 141.15 1 0.74821 0.84708 0 88991000 48389000 40602000 35988 2129 13595 13969 56365;56366 56366 TYDPSGDSTLPTCSK 15 1 0 Unmodified _TYDPSGDSTLPTCSK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.8663 2 814.85906 1627.70357 66466.23 1.0208 0.00083178 -0.50127 -0.00040847 0.5195 0.00042332 814.858853315991 818.86563438081 44.034 0.73016 44.034 43.764 44.494 -3.8147E-06 396 64 8 0 0 0 9.9467E-39 2 24004 171.32 164.35 1 0.68992 0.77131 0 104490000 56719000 47770000 35989 2129 13595 13969 56367;56368 56368 TYDPSGDSTLPTCSK 15 1 0 Unmodified _TYDPSGDSTLPTCSK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 818.8668 2 814.85906 1627.70357 66397.48 0.39511 0.00032196 0.097994 7.9852E-05 0.49311 0.00040181 814.859321161306 818.866280495514 52.117 1.4007 52.117 51.713 53.113 0 739 115 10 0 0 0 3.1133E-10 4 25644 117.2 113.88 1 0.99338 0.82362 0 45143000 20212000 24931000 35990 2129 13595 13969 56369;56370;56371;56372 56370 TYDPSGDSTLPTCSK 15 1 0 Unmodified _TYDPSGDSTLPTCSK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.866 2 814.85906 1627.70357 66057.5 0.47994 0.00039108 -0.048881 -3.9831E-05 0.43106 0.00035125 814.859214652936 818.866161952221 52.742 1.5826 52.742 52.336 53.919 0 740 119 10 0 0 0 4.1312E-07 4 25412 104.24 102.1 1 1.0066 0.84651 0 51005000 25601000 25404000 35991 2129 13595 13969 56373;56374;56375;56376 56374 TYELLNCDK 9 1 0 Unmodified _TYELLNCDK_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2;B4DP65;A0A087WVM7;A0A0U3B3H7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.278 2 578.271164 1154.52777 74907.37 0.33327 0.00019272 0.90687 0.00052441 1.2401 0.00071713 578.272002905718 582.278691153809 61.046 0.95457 61.046 60.534 61.489 0 278 81 4 0 0 0 0.013268 1 30435 56.729 52.983 1 1.3451 1.0923 0 4443400 1854000 2589400 35992 759 13596 13970 56377 56377 TYEVSLR 7 0 1 Unmodified _TYEVSLR_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 439.2362 2 434.232168 866.449782 90112.39 -0.014003 -6.0807E-06 0.45173 0.00019616 0.43773 0.00019007 434.232046727154 439.236273516394 46.164 1.0672 46.164 45.75 46.817 0 506 94 7 0 0 0 0.041633 1 24732 58.917 37.371 1 0.84301 0.96308 0 124520000 65417000 59105000 35993 1770 13597 13971 56378 56378 TYEVSLR 7 0 1 Unmodified _TYEVSLR_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.232 2 434.232168 866.449782 90326.87 0.055886 2.4267E-05 0.67514 0.00029317 0.73103 0.00031744 434.232243173702 439.236384577714 45.231 1.0624 45.231 44.727 45.789 0 382 89 6 0 0 0 0.030326 2 24751 68.915 44.943 1 0.80849 0.9236 0 150620000 88508000 62113000 35994 1770 13597 13971 56379;56380 56380 TYEVSLR 7 0 1 Unmodified _TYEVSLR_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 434.2323 2 434.232168 866.449782 90521.2 -0.16796 -7.2933E-05 0.18742 8.1385E-05 0.019465 8.4522E-06 434.232152506983 439.236183012362 53.229 1.1986 53.229 52.703 53.902 3.8147E-06 372 90 7 0 0 0 0.045193 1 26369 57.281 41.127 1 1.1835 0.96819 0 13488000 6191600 7296500 35995 1770 13597 13971 56381 56381 TYEVSLR 7 0 1 Unmodified _TYEVSLR_ 0 0 0 Q16531;F5GY55;B7Z2A1;F5H2L3 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 434.2319 2 434.232168 866.449782 90380.8 -0.20942 -9.0939E-05 0.60204 0.00026143 0.39262 0.00017049 434.232354455656 439.236258797128 53.507 1.1338 53.507 53.116 54.25 0 378 79 7 0 0 0 0.053742 1 25957 53.351 39.68 1 1.15 0.93598 0 12473000 5621600 6851500 35996 1770 13597 13971 56382 56382 TYFEDNPR 8 0 1 Unmodified _TYFEDNPR_ 0 0 0 Q9NY93;Q53HB9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.2353 2 521.235439 1040.45632 85759.84 0.39974 0.00020836 0.54559 0.00028438 0.94532 0.00049274 521.235440573962 526.239753331237 32.97 0.94517 32.97 32.478 33.423 0 274 90 4 0 0 0 0.013109 1 16323 66.073 30.193 1 0.90408 0.93684 0 22927000 13228000 9699200 35997 2081 13598 13972 56383 56383 TYFEDNPR 8 0 1 Unmodified _TYFEDNPR_ 0 0 0 Q9NY93;Q53HB9;H7BZN7 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.2356 2 521.235439 1040.45632 85730 0.57816 0.00030136 0.23434 0.00012214 0.81249 0.0004235 521.2352511588 526.239504130054 32.527 0.89311 32.527 32.019 32.912 0 283 84 5 0 0 0 0.01993 1 15984 58.815 32.921 1 0.96009 1.0259 0 24833000 11610000 13224000 35998 2081 13598 13972 56384 56384 TYFGPYDETTCIDWTDDSR 19 0 1 Unmodified _TYFGPYDETTCIDWTDDSR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1176.9866 2 1171.48133 2340.94811 57919.33 0.098782 0.00011572 -0.28705 -0.00033627 -0.18827 -0.00022055 1171.98212623163 1176.98662707378 106.71 0.41726 106.71 106.53 106.94 0 109 31 6 0 0 0 1.3849E-05 4 66271 68.83 68.83 1 0.74853 0.74968 0 9019100 5024000 3995100 35999 1756 13599 13973 56385;56386;56387;56388 56386 TYFGPYDETTCIDWTDDSR 19 0 1 Unmodified _TYFGPYDETTCIDWTDDSR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1171.9828 2 1171.48133 2340.94811 NaN NaN NaN 0.058698 6.8764E-05 NaN NaN NaN NaN 106.21 0.34546 106.21 106.09 106.44 -7.6294E-06 0 0 0 1.5663E-06 3 67545 76.588 74.025 1 NaN NaN 0 8309500 8309500 0 36000 1756 13599 13973 56389;56390;56391 56389 TYFGPYDETTCIDWTDDSR 19 0 1 Unmodified _TYFGPYDETTCIDWTDDSR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1176.988 2 1171.48133 2340.94811 57203.65 0.10672 0.00012502 0.13412 0.00015712 0.24083 0.00028213 1171.98308328335 1176.98738695924 117.6 0.66895 117.6 117.35 118.02 0 173 30 8 0 0 0 0.025913 1 69199 23.138 23.138 1 1.1726 1.0092 0 7497600 3204700 4293000 36001 1756 13599 13973 56392 56392 TYGEPESAGPSR 12 0 1 Unmodified _TYGEPESAGPSR_ 0 0 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.7858 2 625.786024 1249.55749 76555.11 0.11062 6.9224E-05 0.18242 0.00011415 0.29304 0.00018338 625.786103053348 630.790220674085 22.033 0.69539 22.033 21.801 22.496 0 205 41 9 0 0 0 9.0593E-05 1 8109 96.342 88.696 1 0.71665 0.8003 0 86048000 47311000 38737000 36002 1590 13600 13974 56393 56393 TYGEPESAGPSR 12 0 1 Unmodified _TYGEPESAGPSR_ 0 0 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.7904 2 625.786024 1249.55749 77100.47 0.30373 0.00019007 0.04297 2.689E-05 0.3467 0.00021696 625.786045677946 630.79012090229 21.9 0.61336 21.9 21.696 22.309 0 146 28 9 0 0 0 1.7773E-05 2 7997 104.43 98.473 1 0.68308 0.77828 0 103800000 60573000 43228000 36003 1590 13600 13974 56394;56395 56395 TYGEPESAGPSR 12 0 1 Unmodified _TYGEPESAGPSR_ 0 0 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.7861 2 625.786024 1249.55749 77216.89 0.57851 0.00036202 -0.031944 -1.999E-05 0.54656 0.00034203 625.785864945171 630.790069681667 24.489 0.73994 24.489 24.221 24.961 1.9073E-06 227 40 10 0 0 0 0.00073439 2 8590 66.595 58.95 1 0.7227 0.59281 0 12365000 7253000 5112200 36004 1590 13600 13974 56396;56397 56397 TYGEPESAGPSR 12 0 1 Unmodified _TYGEPESAGPSR_ 0 0 0 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.786 2 625.786024 1249.55749 77168.71 0.53324 0.0003337 -0.18354 -0.00011486 0.3497 0.00021884 625.785895381344 630.789997989855 24.56 0.65814 24.56 24.361 25.019 0 191 31 10 0 0 0 0.00018248 2 8169 75.197 69.162 1 0.69287 0.55913 0 11312000 6551500 4760200 36005 1590 13600 13974 56398;56399 56399 TYGGCEGPDAMYVK 14 1 0 Oxidation (M) _TYGGCEGPDAM(ox)YVK_ TYGGCEGPDAM(1)YVK TYGGCEGPDAM(51.73)YVK 0 1 0 E5RHG8;A0A024R7Y5;Q15369;R4GMY8 E5RHG8 E5RHG8 TCEB1 Transcription elongation factor B polypeptide 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.3348 2 782.326341 1562.63813 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.712 1 39.712 39.212 40.212 -3.8147E-06 0 0 0 0.0045144 1 21093 51.727 41.204 1 36006 238 13601 13975 56400 56400 178 TYLPSQVSR 9 0 1 Unmodified _TYLPSQVSR_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7859 2 525.782556 1049.55056 85089.06 0.79261 0.00041674 -0.53649 -0.00028208 0.25612 0.00013466 525.782563514811 530.786478298746 44.374 0.46304 44.374 44.106 44.569 0 122 40 4 0 0 0 0.034216 1 23725 44.349 35.577 1 1.4093 1.433 0 18405000 7510200 10894000 36007 1545 13602 13976 56401 56401 TYLPSQVSR 9 0 1 Unmodified _TYLPSQVSR_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7868 2 525.782556 1049.55056 NaN NaN NaN -0.28911 -0.00015201 NaN NaN NaN NaN 43.524 0.49511 43.524 43.319 43.814 0 0 0 0 0.037468 1 23597 51.066 41.155 1 NaN NaN 0 21676000 0 21676000 36008 1545 13602 13976 56402 56402 TYLTITDTQLVNSLLEK 17 1 0 Unmodified _TYLTITDTQLVNSLLEK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 980.5396 2 976.532963 1951.05137 62171.38 0.66837 0.00065268 -0.19446 -0.0001899 0.47391 0.00046279 976.533073531508 980.54013096982 126.49 0.78342 126.49 126.26 127.05 7.6294E-06 310 55 9 0 0 0 3.1692E-45 2 82248 170.18 170.18 1 1.2607 1.3703 0 47374000 20311000 27063000 36009 907 13603 13977 56403;56404 56404 TYLTITDTQLVNSLLEK 17 1 0 Unmodified _TYLTITDTQLVNSLLEK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.0424 2 976.532963 1951.05137 61882.98 0.59762 0.0005836 -0.0026296 -2.5679E-06 0.59499 0.00058103 976.532890430346 980.540211714982 126.08 0.69697 126.08 125.93 126.62 0 231 42 8 0 0 0 7.4592E-18 2 83979 127.02 127.02 1 1.2873 1.4386 0 95718000 40227000 55491000 36010 907 13603 13977 56405;56406 56405 TYLTITDTQLVNSLLEK 17 1 0 Unmodified _TYLTITDTQLVNSLLEK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 981.0244 2 976.532963 1951.05137 60097.17 0.26134 0.00025521 -0.67328 -0.00065748 -0.41194 -0.00040228 976.532425462854 981.041855478953 134.72 0.2988 134.72 134.5 134.8 0 16 7 6 0 0 0 1.3235E-12 2 82375 117.07 117.07 1 0.78763 0.65546 0 47336000 25306000 22030000 36011 907 13603 13977 56407;56408 56407 TYLTITDTQLVNSLLEK 17 1 0 Unmodified _TYLTITDTQLVNSLLEK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 976.9576 2 976.532963 1951.05137 62296.68 0.4511 0.00044051 -0.45188 -0.00044128 -0.00078208 -7.6373E-07 976.531957927353 981.041845364007 134.68 0.22131 134.68 134.59 134.81 0 21 4 7 0 0 0 6.4696E-08 1 81496 99.531 99.531 1 0.90097 0.76071 0 56337000 28812000 27525000 36012 907 13603 13977 56409 56409 TYNASITLQQQLK 13 1 0 Unmodified _TYNASITLQQQLK_ 0 0 0 P11387;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.4103 2 754.40938 1506.80421 69473.85 0.57354 0.00043269 0.00048936 3.6918E-07 0.57403 0.00043305 754.40941437563 758.41643336548 74.104 1.7136 74.104 73.594 75.307 0 907 146 11 0 0 0 1.3167E-38 4 43723 180.07 180.07 1 1.0889 1.2897 0 453020000 218880000 234150000 36013 1470 13604 13978 56410;56411;56412;56413 56413 TYNASITLQQQLK 13 1 0 Unmodified _TYNASITLQQQLK_ 0 0 0 P11387;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.4164 2 754.40938 1506.80421 69695.48 0.73631 0.00055548 -0.1342 -0.00010124 0.60211 0.00045423 754.409315501423 758.416327780642 72.968 1.8216 72.968 72.529 74.35 -7.6294E-06 961 154 10 0 0 0 1.3937E-38 6 44050 179.57 172.88 1 1.0799 1.2721 0 528150000 247170000 280980000 36014 1470 13604 13978 56414;56415;56416;56417;56418;56419 56418 TYNASITLQQQLK 13 1 0 Unmodified _TYNASITLQQQLK_ 0 0 0 P11387;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 758.4166 2 754.40938 1506.80421 70470.02 0.62229 0.00046946 -0.24888 -0.00018776 0.37341 0.00028171 754.409441135123 758.41628270531 85.052 2.2649 85.052 84.571 86.836 0 1069 152 13 0 0 0 1.0868E-38 6 46390 181.53 170 1 1.4924 1.3102 0 218440000 87920000 130520000 36015 1470 13604 13978 56420;56421;56422;56423;56424;56425 56421 TYNASITLQQQLK 13 1 0 Unmodified _TYNASITLQQQLK_ 0 0 0 P11387;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.4095 2 754.40938 1506.80421 70456.25 0.63091 0.00047596 -0.24085 -0.0001817 0.39006 0.00029426 754.409510542551 758.416254888909 85.221 2.6323 85.221 84.651 87.283 0 1089 164 13 0 0 0 6.862E-89 5 45609 230.61 230.61 1 1.5355 1.3251 0 201810000 83316000 118490000 36016 1470 13604 13978 56426;56427;56428;56429;56430 56427 TYNEPGSQVFK 11 1 0 Unmodified _TYNEPGSQVFK_ 0 0 0 Q86U86;E7EVG2;H0Y5B5 Q86U86 Q86U86 PBRM1 Protein polybromo-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3099 2 635.309135 1268.60372 77230.35 0.095659 6.0773E-05 -1.9451 -0.0012357 -1.8494 -0.0011749 635.30931123154 639.814840051382 47.688 0.38059 47.688 47.566 47.946 -3.8147E-06 100 27 7 0 0 0 0.00041899 1 26550 79.986 44.717 1 1.1645 1.1742 0 28104000 17509000 10595000 36017 1883 13605 13979 56431 56431 TYPVQEYFLEDCIQMTHFVPPPK 23 1 0 Oxidation (M) _TYPVQEYFLEDCIQM(ox)THFVPPPK_ TYPVQEYFLEDCIQM(1)THFVPPPK TYPVQEYFLEDCIQM(48.32)THFVPPPK 0 1 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.4581 3 952.452151 2854.33462 63186.17 0.90826 0.00086507 -0.47207 -0.00044963 0.43619 0.00041545 952.786056145849 955.457374537159 113.71 0.80482 113.71 113.27 114.08 0 388 59 9 0 0 0 1.1968E-06 1 71917 48.315 48.315 1 1.6369 1.6464 0 27062000 7764200 19298000 36018 1691 13606 13980 56432 56432 1521 TYQELLVNQNPIAQPLASR 19 0 1 Unmodified _TYQELLVNQNPIAQPLASR_ 0 0 0 Q9NX24;D6RC52;D6RCB9;J3QSY4 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1083.5879 2 1078.07893 2154.14332 58815.27 0.22736 0.00024511 0.33366 0.00035971 0.56101 0.00060482 1078.58073804884 1083.5852199111 107.52 0.84259 107.52 107.22 108.06 0 406 63 9 0 0 0 3.6232E-08 3 66799 92.939 92.939 1 0.74059 0.82049 0 63903000 36198000 27705000 36019 2077 13607 13981 56433;56434;56435 56434 TYQELLVNQNPIAQPLASR 19 0 1 Unmodified _TYQELLVNQNPIAQPLASR_ 0 0 0 Q9NX24;D6RC52;D6RCB9;J3QSY4 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1078.0765 2 1078.07893 2154.14332 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.06 1 108.06 107.56 108.56 7.6294E-06 0 0 0 0.0016537 1 67410 54.898 42.732 1 36020 2077 13607 13981 56436 56436 TYQELLVNQNPIAQPLASR 19 0 1 Unmodified _TYQELLVNQNPIAQPLASR_ 0 0 0 Q9NX24;D6RC52;D6RCB9;J3QSY4 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1083.5862 2 1078.07893 2154.14332 58782.16 0.31635 0.00034105 0.23583 0.00025424 0.55217 0.00059529 1078.58062269906 1083.58494077262 106.99 0.79327 106.99 106.71 107.5 0 364 54 10 0 0 0 1.2909E-39 4 68408 154.65 154.65 1 0.79625 0.91614 0 74953000 41668000 33285000 36021 2077 13607 13981 56437;56438;56439;56440 56439 TYQELLVNQNPIAQPLASR 19 0 1 Unmodified _TYQELLVNQNPIAQPLASR_ 0 0 0 Q9NX24;D6RC52;D6RCB9;J3QSY4 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1078.5806 2 1078.07893 2154.14332 58900.71 0.25132 0.00027094 0.13047 0.00014066 0.38179 0.0004116 1078.58046143582 1083.58487322208 118.65 1.0231 118.65 118.36 119.38 0 309 48 9 0 0 0 2.1882E-30 2 70061 145.7 145.7 1 0.68395 0.58384 0 37730000 21542000 16188000 36022 2077 13607 13981 56441;56442 56442 TYQELLVNQNPIAQPLASR 19 0 1 Unmodified _TYQELLVNQNPIAQPLASR_ 0 0 0 Q9NX24;D6RC52;D6RCB9;J3QSY4 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1078.58 2 1078.07893 2154.14332 58848.07 0.24978 0.00026928 0.082337 8.8766E-05 0.33212 0.00035805 1078.58042528657 1083.58476808941 118.44 0.90546 118.44 118.16 119.06 0 325 42 11 0 0 0 4.6258E-30 2 68970 140.27 140.27 1 0.6909 0.60269 0 26507000 15035000 11472000 36023 2077 13607 13981 56443;56444 56444 TYSLGSALRPSTSR 14 0 2 Unmodified _TYSLGSALRPSTSR_ 0 0 1 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.2671 3 499.266962 1494.77906 84288.09 0.063462 3.1684E-05 0.12845 6.4131E-05 0.19191 9.5816E-05 499.267039999534 505.939178306838 53.119 0.97848 53.119 52.842 53.82 0 424 75 10 0 0 0 0.00076857 2 29605 52.071 45.032 1 1.0299 1.1259 0 289810000 139620000 150190000 36024 1457 13608 13982 56445;56446 56446 TYSLGSALRPSTSR 14 0 2 Unmodified _TYSLGSALRPSTSR_ 0 0 1 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.3975 2 748.396804 1494.77906 71127.31 0.3199 0.00023941 0.15254 0.00011416 0.47244 0.00035357 748.396768197288 758.405104812015 53.106 0.6411 53.106 52.915 53.556 0 266 50 9 0 0 0 0.032457 1 29625 50.108 50.108 1 1.0865 1.1842 0 108040000 47406000 60634000 36025 1457 13608 13982 56447 56447 TYSLGSALRPSTSR 14 0 2 Unmodified _TYSLGSALRPSTSR_ 0 0 1 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.267 3 499.266962 1494.77906 83101.81 0.068452 3.4176E-05 -0.15016 -7.4968E-05 -0.081703 -4.0792E-05 499.266980516558 505.939013087303 51.637 1.1028 51.637 51.189 52.291 0 528 85 8 0 0 0 0.0023227 2 29359 44.457 44.457 1 1.0742 1.2744 0 193960000 95258000 98698000 36026 1457 13608 13982 56448;56449 56449 TYSLSSSFSSSSSTR 15 0 1 Unmodified _TYSLSSSFSSSSSTR_ 0 0 0 A8K4M5;O60563 A8K4M5 A8K4M5 CCNT1 Cyclin-T1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.3632 2 792.362824 1582.71109 70118.82 0.82558 0.00065416 0.29255 0.0002318 1.1181 0.00088596 792.36278947322 797.868713384016 58.141 0.19696 58.141 58.013 58.21 0 29 15 4 0 0 0 0.0018483 1 32916 46.592 45.395 1 0.42031 0.44524 0 3875300 2778000 1097200 36027 737 13609 13983 56450 56450 TYSVPAHQER 10 0 1 Unmodified _TYSVPAHQER_ 0 0 0 A0A024RBY9;P53701;Q68D50 A0A024RBY9 A0A024RBY9 HCCS;DKFZp779I1858 Cytochrome c-type heme lyase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 396.5313 3 396.531638 1186.57309 97744.87 -0.21027 -8.3377E-05 -1.08 -0.00042824 -1.2902 -0.00051162 396.531485389128 399.867800857117 19.366 0.28253 19.366 19.225 19.507 0 28 10 5 0 0 0 0.0099412 1 5808 33.89 33.89 1 0.71799 0.71895 0 6839900 4327100 2512800 36028 350 13610 13984 56451 56451 TYSVVPMTSR 10 0 1 Oxidation (M) _TYSVVPM(ox)TSR_ TYSVVPM(1)TSR TYSVVPM(71.69)TSR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.7872 2 578.786981 1155.55941 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.237 1 42.237 41.737 42.737 0 0 0 0 0.00022776 1 22411 71.692 48.952 1 36029 1665 13611 13985 56452 56452 1464 TYSVVPMTSR 10 0 1 Oxidation (M) _TYSVVPM(ox)TSR_ TYSVVPM(1)TSR TYSVVPM(47.2)TSR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.7874 2 578.786981 1155.55941 NaN NaN NaN 0.04772 2.762E-05 NaN NaN NaN NaN 41.537 0.48446 41.537 41.275 41.759 0 0 0 0 0.015068 1 22337 47.198 31.536 1 NaN NaN 0 6227300 6227300 0 36030 1665 13611 13985 56453 56453 1464 TYSYLTPDLWK 11 1 0 Unmodified _TYSYLTPDLWK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.8582 2 693.850635 1385.68672 71622.23 0.77087 0.00053487 0.69276 0.00048067 1.4636 0.0010155 693.851792588223 697.858336991172 107.49 1.3889 107.49 107.05 108.44 0 598 104 8 0 0 0 5.4615E-10 2 66761 129.38 129.38 1 0.90763 1.0265 0 147330000 76702000 70624000 36031 1485;1930 13612 13986 56454;56455 56455 TYSYLTPDLWK 11 1 0 Unmodified _TYSYLTPDLWK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.8508 2 693.850635 1385.68672 71648.61 0.8485 0.00058873 0.78496 0.00054464 1.6335 0.0011334 693.851873483894 697.858529143279 106.79 1.3427 106.79 106.31 107.66 0 567 97 9 0 0 0 3.2364E-06 2 67894 111.46 111.46 1 0.8824 1.0024 0 142970000 76220000 66750000 36032 1485;1930 13612 13986 56456;56457 56456 TYSYLTPDLWK 11 1 0 Unmodified _TYSYLTPDLWK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.8583 2 693.850635 1385.68672 72008.09 0.66192 0.00045927 -0.021658 -1.5027E-05 0.64026 0.00044424 693.850906770416 697.857775460562 118.66 1.1693 118.66 118.19 119.36 0 330 54 10 0 0 0 5.4615E-10 2 70060 129.38 118.55 1 0.83713 0.71115 0 61579000 32963000 28617000 36033 1485;1930 13612 13986 56458;56459 56459 TYSYLTPDLWK 11 1 0 Unmodified _TYSYLTPDLWK_ 0 0 0 P15880;Q8N5L9;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 P15880;Q8NI62 P15880 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.8499 2 693.850635 1385.68672 71448.57 0.71901 0.00049888 -0.37595 -0.00026086 0.34305 0.00023803 693.850439010032 697.857561652703 118.47 1.1622 118.47 118.16 119.32 0 300 52 9 0 0 0 0.00018048 2 68949 93.649 85.724 1 0.87368 0.72523 0 36370000 20695000 15675000 36034 1485;1930 13612 13986 56460;56461 56460 TYTAYVDLEK 10 1 0 Unmodified _TYTAYVDLEK_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.801 2 601.800611 1201.58667 NaN NaN NaN -0.53983 -0.00032487 NaN NaN NaN NaN 67.431 0.34077 67.431 67.251 67.592 0 0 0 0 0.024948 1 39952 53.327 38.813 1 NaN NaN 0 3161700 3161700 0 36035 567 13613 13987 56462 56462 TYTAYVDLEK 10 1 0 Unmodified _TYTAYVDLEK_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 605.8082 2 601.800611 1201.58667 78130.95 0.51894 0.0003123 -0.5328 -0.00032064 -0.013865 -8.3439E-06 601.800179982928 605.807577589783 79.065 0.49889 79.065 78.852 79.351 0 101 29 5 0 0 0 0.03734 1 41762 39.848 39.848 1 1.9719 1.6885 0 1413300 628470 784860 36036 567 13613 13987 56463 56463 TYTDELTPIESAVSVFK 17 1 0 Unmodified _TYTDELTPIESAVSVFK_ 0 0 0 Q9UF24;O75489;Q53FM7 Q9UF24 Q9UF24 DKFZp586K0821;NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 954.9926 2 950.482939 1898.95133 65305.68 1.0256 0.00097479 0.0017771 1.6891E-06 1.0274 0.00097648 950.48304182697 954.489180611026 124.55 0.40329 124.55 124.34 124.74 0 97 25 6 0 0 0 0.018738 1 82808 35.204 35.204 1 1.3986 1.3976 0 5638300 2138700 3499600 36037 1406 13614 13988 56464 56464 TYTQLVR 7 0 1 Unmodified _TYTQLVR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.749 2 440.747985 879.481417 91637.56 0.22168 9.7704E-05 0.219 9.6524E-05 0.44068 0.00019423 440.747947934079 445.752225048832 38.411 0.89655 38.411 38.116 39.012 0 284 74 5 0 0 0 0.0098984 2 19718 113.08 81.794 1 0.996 1.0434 0 39174000 18224000 20950000 36038 1411 13615 13989 56465;56466 56466 TYTQLVR 7 0 1 Unmodified _TYTQLVR_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.7485 2 440.747985 879.481417 91711.45 -0.036832 -1.6234E-05 0.3325 0.00014655 0.29566 0.00013031 440.747965631051 445.752232544136 37.467 0.83627 37.467 37.196 38.032 0 269 66 6 0 0 0 0.026865 2 19360 74.439 55.079 1 0.93081 1.046 0 45926000 24951000 20975000 36039 1411 13615 13989 56467;56468 56467 TYYYNTETK 9 1 0 Unmodified _TYYYNTETK_ 0 0 0 O75400;H0YG38;Q05C41;F5H578 O75400 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.7762 2 591.769311 1181.52407 77954.6 0.74312 0.00043976 -1.8209 -0.0010775 -1.0778 -0.00063779 591.769263715316 595.775127852571 28.296 0.28508 28.296 28.144 28.429 0 55 19 4 0 0 0 0.001341 1 13294 86.67 75.077 1 1.6579 1.6933 0 10468000 3973100 6494700 36040 1404 13616 13990 56469 56469 VAADLQLSTPQK 12 1 0 Unmodified _VAADLQLSTPQK_ 0 0 0 A7E234;Q9H582;Q569I6;Q9H835 A7E234 A7E234 ZNF644 Zinc finger protein 644 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 639.8607 2 635.853709 1269.69287 78422.89 0.52802 0.00033574 -0.34521 -0.0002195 0.18281 0.00011624 635.853132467816 639.860548755521 67.584 0.34201 67.584 67.431 67.773 0 78 25 4 0 0 0 0.0013581 1 35240 61.344 35.405 1 1.5529 1.3369 0 1108200 469710 638460 36041 693 13617 13991 56470 56470 VAAGLQIK 8 1 0 Unmodified _VAAGLQIK_ 0 0 0 B2RBR9;Q14974;J3QR48 B2RBR9 B2RBR9 KPNB1 Importin subunit beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.2547 2 400.255446 798.496338 96504.42 0.19136 7.6591E-05 0.093597 3.7463E-05 0.28495 0.00011405 400.255090626145 404.262552324902 42.06 0.48993 42.06 41.849 42.339 0 90 36 4 0 0 0 0.01377 2 22302 64.547 38.068 1 2.3823 2.3332 0 22047000 5503700 16543000 36042 880 13618 13992 56471;56472 56471 VAAGLQIK 8 1 0 Unmodified _VAAGLQIK_ 0 0 0 B2RBR9;Q14974;J3QR48 B2RBR9 B2RBR9 KPNB1 Importin subunit beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2555 2 400.255446 798.496338 96149.71 0.14013 5.6087E-05 -0.13194 -5.2809E-05 0.0081911 3.2785E-06 400.255384094028 404.262411753584 40.82 0.18897 40.82 40.694 40.883 3.8147E-06 39 12 5 0 0 0 0.014197 1 21861 63.563 33.338 1 2.1405 2.2999 0 37457000 11870000 25587000 36043 880 13618 13992 56473 56473 VAAGTLDASTK 11 1 0 Unmodified _VAAGTLDASTK_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.287 2 517.279846 1032.54514 85522.74 0.22113 0.00011438 -0.090281 -4.67E-05 0.13085 6.7684E-05 517.279869113518 521.286883974288 28.873 0.38635 28.873 28.683 29.07 0 141 32 6 0 0 0 0.0048085 2 11626 57.348 49.423 1 1.6728 1.3199 0 4084200 1566800 2517400 36044 740 13619 13993 56474;56475 56475 VAAGVLCELAQDK 13 1 0 Unmodified _VAAGVLCELAQDK_ 0 0 0 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495;B4DSW9;B4DL06;B4DGU4;B5BU28;A0A024R2Q3;P35222 A0A0S2Z487 A0A0S2Z487 JUP;CTNNB1 Junction plakoglobin;Catenin beta-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3584 2 687.358302 1372.70205 NaN NaN NaN 1.3112 0.00090126 NaN NaN NaN NaN 86.118 0.48587 86.118 85.966 86.452 0 0 0 0 0.0033495 1 51786 65.5 39.117 1 NaN NaN 0 6222700 6222700 0 36045 94 13620 13994 56476 56476 VAAGVLCELAQDK 13 1 0 Unmodified _VAAGVLCELAQDK_ 0 0 0 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495;B4DSW9;B4DL06;B4DGU4;B5BU28;A0A024R2Q3;P35222 A0A0S2Z487 A0A0S2Z487 JUP;CTNNB1 Junction plakoglobin;Catenin beta-1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.3589 2 687.358302 1372.70205 NaN NaN NaN -0.37102 -0.00025503 NaN NaN NaN NaN 98.698 0.49364 98.698 98.399 98.893 0 0 0 0 0.054201 1 54891 39.58 27.344 1 NaN NaN 0 853350 853350 0 36046 94 13620 13994 56477 56477 VAALTFEANVLAELEK 16 1 0 Unmodified _VAALTFEANVLAELEK_ 0 0 0 C9JY26;Q6NXT3;A0A024QZ68;Q9BZG1;B4DNC0;J3QLC6 C9JY26 C9JY26 RAB34 Ras-related protein Rab-34 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 863.48 2 859.472177 1716.9298 NaN NaN NaN -0.21172 -0.00018196 NaN NaN NaN NaN 128.43 0.35548 128.43 128.31 128.67 0 0 0 0 5.1075E-09 1 83718 102.62 71.335 1 NaN NaN 0 3287100 0 3287100 36047 13 13621 13995 56478 56478 VAAPDVVVPTLDTVR 15 0 1 Unmodified _VAAPDVVVPTLDTVR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.4473 2 776.44068 1550.86681 71150.13 0.79166 0.00061467 0.22191 0.0001723 1.0136 0.00078697 776.440563235723 781.445008736369 106.08 0.48969 106.08 105.84 106.33 -7.6294E-06 146 37 5 0 0 0 0.0038859 1 67369 53.569 53.569 1 3.3742 3.3537 0 16226000 3601700 12625000 36048 1729 13622 13996 56479 56479 VAAPDVVVPTLDTVR 15 0 1 Unmodified _VAAPDVVVPTLDTVR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.4414 2 776.44068 1550.86681 71124.55 0.98722 0.00076652 0.16086 0.0001249 1.1481 0.00089142 776.440932623007 781.44480065106 118.1 0.36177 118.1 117.92 118.28 0 67 14 7 0 0 0 0.0023181 2 69674 45.257 39.412 1 1.0269 0.86713 0 3004700 1518800 1485900 36049 1729 13622 13996 56480;56481 56480 VAAPDVVVPTLDTVR 15 0 1 Unmodified _VAAPDVVVPTLDTVR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.4409 2 776.44068 1550.86681 72095 0.57985 0.00045022 -0.047694 -3.7032E-05 0.53215 0.00041318 776.440570677459 781.444874246337 117.89 0.31634 117.89 117.73 118.04 0 59 14 6 0 0 0 0.002921 2 68614 43.544 37.44 1 0.98199 0.84489 0 2778800 1468700 1310100 36050 1729 13622 13996 56482;56483 56483 VAAPEIVSGVSGESEQK 17 1 0 Unmodified _VAAPEIVSGVSGESEQK_ 0 0 0 B4DLM8;O15381;B4DQJ4 B4DLM8 B4DLM8 NVL Nuclear valosin-containing protein-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.4395 2 843.930874 1685.84719 68160.6 0.47966 0.0004048 0.091424 7.7156E-05 0.57108 0.00048195 843.930845603396 847.937747978671 68.534 0.46261 68.534 68.317 68.78 0 138 40 5 0 0 0 7.7297E-05 1 39646 79.633 79.633 1 1.5889 1.6126 0 13391000 5850800 7540600 36051 997 13623 13997 56484 56484 VAAPEIVSGVSGESEQK 17 1 0 Unmodified _VAAPEIVSGVSGESEQK_ 0 0 0 B4DLM8;O15381;B4DQJ4 B4DLM8 B4DLM8 NVL Nuclear valosin-containing protein-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.9377 2 843.930874 1685.84719 68310.18 0.62176 0.00052472 0.19404 0.00016375 0.8158 0.00068848 843.931197988015 847.93766705169 67.5 0.45299 67.5 67.213 67.666 0 129 35 6 0 0 0 0.00011728 1 39899 78.324 78.324 1 2.0401 2.2094 0 22091000 8655500 13435000 36052 997 13623 13997 56485 56485 VAAPEIVSGVSGESEQK 17 1 0 Unmodified _VAAPEIVSGVSGESEQK_ 0 0 0 B4DLM8;O15381;B4DQJ4 B4DLM8 B4DLM8 NVL Nuclear valosin-containing protein-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 847.9384 2 843.930874 1685.84719 68779.01 0.54899 0.00046331 0.17532 0.00014796 0.72431 0.00061127 843.930933641531 847.937716766459 78.836 0.46342 78.836 78.624 79.088 0 133 30 6 0 0 0 0.0039804 1 41503 40.066 40.066 1 1.8713 1.516 0 1914200 543510 1370600 36053 997 13623 13997 56486 56486 VAAQCSHAAVSAYK 14 1 0 Unmodified _VAAQCSHAAVSAYK_ 0 0 0 Q96ME4;J3KQ48;Q9Y3E5 Q96ME4 Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.8604 2 731.859 1461.70345 NaN NaN NaN 0.36138 0.00026448 NaN NaN NaN NaN 21.174 0.18871 21.174 21.049 21.237 0 0 0 0 3E-10 1 7464 116.24 81.517 1 NaN NaN 0 2301600 2301600 0 36054 1329 13624 13998 56487 56487 VAAQCSHAAVSAYK 14 1 0 Unmodified _VAAQCSHAAVSAYK_ 0 0 0 Q96ME4;J3KQ48;Q9Y3E5 Q96ME4 Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.867 2 731.859 1461.70345 71205.18 0.42978 0.00031454 0.89446 0.00065462 1.3242 0.00096915 731.859587002018 735.866936739198 21.034 0.20199 21.034 20.909 21.111 -1.9073E-06 36 10 5 0 0 0 1.4894E-14 2 7237 133.15 108.37 1 0.37366 0.39077 0 10299000 7322900 2976400 36055 1329 13624 13998 56488;56489 56489 VAAQCSHAAVSAYK 14 1 0 Unmodified _VAAQCSHAAVSAYK_ 0 0 0 Q96ME4;J3KQ48;Q9Y3E5 Q96ME4 Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.9047 3 488.241759 1461.70345 86258.19 0.1436 7.0111E-05 0.81895 0.00039984 0.96255 0.00046996 488.242120747699 490.914351507536 21.034 0.23696 21.034 20.909 21.146 -1.9073E-06 53 12 7 0 0 0 0.018894 1 7207 29.129 16.769 1 0.43532 0.44183 0 12825000 8830200 3994600 36056 1329 13624 13998 56490 56490 VAASEEQEFAEGFVK 15 1 0 Unmodified _VAASEEQEFAEGFVK_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.8952 2 820.89376 1639.77297 67119.39 0.8707 0.00071475 0.018102 1.486E-05 0.8888 0.00072961 821.395078445129 824.900905400968 86.81 0.61774 86.81 86.452 87.069 0 205 43 6 0 0 0 2.3703E-07 2 52176 107.85 107.85 1 0.57349 0.58741 0 14383000 9058800 5324100 36057 1492 13625 13999 56491;56492 56492 VAASEEQEFAEGFVK 15 1 0 Unmodified _VAASEEQEFAEGFVK_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.3958 2 820.89376 1639.77297 69803.02 0.94228 0.00077352 -0.26122 -0.00021444 0.68106 0.00055908 820.893526632546 824.901268483247 85.888 0.58241 85.888 85.608 86.191 0 138 44 5 0 0 0 3.8321E-10 4 53073 115.33 106.84 1 0.5949 0.62376 0 19509000 12743000 6765800 36058 1492 13625 13999 56493;56494;56495;56496 56496 VAASEEQEFAEGFVK 15 1 0 Unmodified _VAASEEQEFAEGFVK_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 825.4022 2 820.89376 1639.77297 NaN NaN NaN 0.013609 1.1171E-05 NaN NaN NaN NaN 99.92 0.41186 99.92 99.681 100.09 0 0 0 0 0.010064 1 56488 51.013 35.123 1 NaN NaN 0 1609200 0 1609200 36059 1492 13625 13999 56497 56497 VAASEEQEFAEGFVK 15 1 0 Unmodified _VAASEEQEFAEGFVK_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 820.8942 2 820.89376 1639.77297 70122.2 0.61754 0.00050693 0.33608 0.00027588 0.95362 0.00078282 820.894353438036 824.901011759815 99.874 0.34938 99.874 99.729 100.08 7.6294E-06 69 32 4 0 0 0 0.0013373 1 55594 48.044 48.044 1 0.9105 0.70878 0 3572500 1678700 1893800 36060 1492 13625 13999 56498 56498 VAASEEQEFAEGFVK 15 1 0 Unmodified _VAASEEQEFAEGFVK_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 824.9005 2 820.89376 1639.77297 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.803 1 99.803 99.303 100.3 0 0 0 0 0.0086147 1 55599 49.423 33.17 1 36061 1492 13625 13999 56499 56499 VAASTFSSDSK 11 1 0 Unmodified _VAASTFSSDSK_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7;J3QR85 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.2669 2 550.266936 1098.51932 79668.9 0.65693 0.00036148 1.9967 0.0010987 2.6536 0.0014602 550.266639704666 554.27492100272 23.9 0.66212 23.9 23.575 24.237 -1.9073E-06 181 30 11 0 0 0 7.8316E-06 2 9675 109.66 109.66 1 0.81899 0.9008 0 54607000 28898000 25709000 36062 876 13626 14000 56500;56501 56500 VAASTFSSDSK 11 1 0 Unmodified _VAASTFSSDSK_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7;J3QR85 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.2744 2 550.266936 1098.51932 80755.58 0.23951 0.00013179 -0.02298 -1.2645E-05 0.21653 0.00011915 550.2668376747 554.273778761756 26.269 0.58554 26.269 25.943 26.528 0 86 22 6 0 0 0 0.00093586 2 9827 71.349 67.603 1 1.3015 1.026 0 5557100 2254000 3303000 36063 876 13626 14000 56502;56503 56503 VAASTFSSDSKK 12 2 0 Unmodified _VAASTFSSDSKK_ 0 0 1 B2RAX6;Q9Y5J1;J3KSR7;J3QR85 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 622.3289 2 614.314417 1226.61428 NaN NaN NaN 0.7687 0.00047223 NaN NaN NaN NaN 19.514 0.30448 19.514 19.378 19.683 0 0 0 0 0.022965 1 5229 50.292 28.786 1 NaN NaN 0 1331700 0 1331700 36064 876 13627 14001 56504 56504 VAATSVITIVK 11 1 0 Unmodified _VAATSVITIVK_ 0 0 0 A0A024R8X1;O15525 A0A024R8X1 A0A024R8X1 hCG_1991559;MAFG Transcription factor MafG MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.3552 2 551.347532 1100.68051 82835.27 0.93034 0.00051294 -0.20052 -0.00011056 0.72982 0.00040238 551.347375110136 555.354375268922 84.67 0.46899 84.67 84.46 84.929 -7.6294E-06 171 39 6 0 0 0 5.7947E-10 2 50766 128.86 106.77 1 1.4545 1.5791 0 46076000 20239000 25837000 36065 262 13628 14002 56505;56506 56506 VAATSVITIVK 11 1 0 Unmodified _VAATSVITIVK_ 0 0 0 A0A024R8X1;O15525 A0A024R8X1 A0A024R8X1 hCG_1991559;MAFG Transcription factor MafG MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.3549 2 551.347532 1100.68051 82787.17 0.80286 0.00044265 -0.11316 -6.2389E-05 0.6897 0.00038027 551.347364509047 555.354425775839 83.562 0.51076 83.562 83.325 83.836 0 163 38 6 0 0 0 2.8475E-06 2 51212 111.61 78.344 1 1.4739 1.6255 0 43767000 18354000 25413000 36066 262 13628 14002 56507;56508 56508 VAATSVITIVK 11 1 0 Unmodified _VAATSVITIVK_ 0 0 0 A0A024R8X1;O15525 A0A024R8X1 A0A024R8X1 hCG_1991559;MAFG Transcription factor MafG MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 555.355 2 551.347532 1100.68051 82229.84 0.66478 0.00036652 0.11275 6.2165E-05 0.77753 0.00042869 551.347506854949 555.354565914234 97.137 0.57664 97.137 96.858 97.435 0 130 28 7 0 0 0 0.00093586 2 54548 71.349 52.255 1 1.7692 1.4186 0 8274800 2931800 5343000 36067 262 13628 14002 56509;56510 56509 VAATSVITIVK 11 1 0 Unmodified _VAATSVITIVK_ 0 0 0 A0A024R8X1;O15525 A0A024R8X1 A0A024R8X1 hCG_1991559;MAFG Transcription factor MafG MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.3547 2 551.347532 1100.68051 82075.17 0.38051 0.00020979 0.20093 0.00011078 0.58144 0.00032058 551.347582217144 555.354577553099 96.898 0.60912 96.898 96.621 97.23 0 124 28 6 0 0 0 0.00041914 2 53600 79.974 56.545 1 1.7425 1.4217 0 6074100 2511100 3563000 36068 262 13628 14002 56511;56512 56511 VACCPLER 8 0 1 Unmodified _VACCPLER_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.7361 2 502.736237 1003.45792 85008.35 0.16882 8.4871E-05 -0.19073 -9.5889E-05 -0.021915 -1.1017E-05 502.73616578063 507.740377464096 27.005 0.53296 27.005 26.806 27.339 0 131 28 8 0 0 0 0.0058079 2 12220 89.296 80.473 1 0.7434 0.82765 0 79591000 45688000 33903000 36069 908 13629 14003 56513;56514 56514 VACCPLER 8 0 1 Unmodified _VACCPLER_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.7364 2 502.736237 1003.45792 84479.56 0.32483 0.0001633 -0.088672 -4.4579E-05 0.23616 0.00011872 502.736231384444 507.740343176146 26.618 0.47111 26.618 26.433 26.905 0 110 23 9 0 0 0 0.0065453 2 11956 86.794 76.084 1 0.78511 0.89528 0 97741000 54567000 43174000 36070 908 13629 14003 56515;56516 56516 VACCPLER 8 0 1 Unmodified _VACCPLER_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.7406 2 502.736237 1003.45792 79718.58 0.1819 9.145E-05 -0.56545 -0.00028427 -0.38354 -0.00019282 502.736230493888 507.740293215782 30.129 0.67576 30.129 29.782 30.458 0 210 45 8 0 0 0 0.013893 2 12341 64.265 56.593 1 1.5138 1.234 0 15245000 6204600 9039900 36071 908 13629 14003 56517;56518 56518 VACCPLER 8 0 1 Unmodified _VACCPLER_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 502.7363 2 502.736237 1003.45792 83499.42 -0.046869 -2.3563E-05 -0.36144 -0.00018171 -0.40831 -0.00020527 502.736446897888 507.740432239416 30.18 0.76827 30.18 29.897 30.665 0 224 46 9 0 0 0 0.042651 2 11938 46.426 42.289 1 1.3662 1.1381 0 15776000 6717500 9058200 36072 908 13629 14003 56519;56520 56520 VACIGAWHPAR 11 0 1 Unmodified _VACIGAWHPAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B2R7Y3;Q92901 P39023 P39023 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.2136 3 413.213475 1236.6186 90151.71 0.41261 0.0001705 0.47247 0.00019523 0.88508 0.00036573 413.213560906105 416.549793763558 44.727 1.3801 44.727 44.125 45.505 0 654 123 8 0 0 0 0.0001021 4 24228 77.192 77.192 1 0.75457 0.88272 0 206390000 117340000 89048000 36073 1554 13630 14004 56521;56522;56523;56524 56523 VACIGAWHPAR 11 0 1 Unmodified _VACIGAWHPAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B2R7Y3;Q92901 P39023 P39023 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.3138 2 619.316574 1236.6186 76357.98 0.82267 0.0005095 -0.10487 -6.495E-05 0.7178 0.00044455 619.316490287957 624.320933526999 44.732 0.54162 44.732 44.425 44.966 0 189 49 6 0 0 0 0.00068785 1 23892 73.248 56.708 1 0.65057 0.72005 0 61144000 38459000 22685000 36074 1554 13630 14004 56525 56525 VACIGAWHPAR 11 0 1 Unmodified _VACIGAWHPAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B2R7Y3;Q92901 P39023 P39023 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3168 2 619.316574 1236.6186 NaN NaN NaN 0.17697 0.0001096 NaN NaN NaN NaN 44.412 0.25165 44.412 44.231 44.482 0 0 0 0 0.0085402 1 23756 60.973 40.644 1 NaN NaN 0 10538000 10538000 0 36075 1554 13630 14004 56526 56526 VACIGAWHPAR 11 0 1 Unmodified _VACIGAWHPAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B2R7Y3;Q92901 P39023 P39023 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.3225 2 619.316574 1236.6186 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.335 1 44.335 43.835 44.835 0 0 0 0 3.6973E-05 1 23795 86.011 66.74 1 36076 1554 13630 14004 56527 56527 VACIGAWHPAR 11 0 1 Unmodified _VACIGAWHPAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B2R7Y3;Q92901 P39023 P39023 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.5496 3 413.213475 1236.6186 89529.13 0.6065 0.00025062 -0.041222 -1.7033E-05 0.56528 0.00023358 413.21357696422 416.549475410658 43.279 0.87229 43.279 43.057 43.929 3.8147E-06 411 70 8 0 0 0 9.8427E-05 2 23394 74.162 74.162 1 0.75042 0.8751 0 489660000 268540000 221110000 36077 1554 13630 14004 56528;56529 56528 VACIGAWHPAR 11 0 1 Unmodified _VACIGAWHPAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B2R7Y3;Q92901 P39023 P39023 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.3215 2 619.316574 1236.6186 75968.82 1.0951 0.00067822 0.30967 0.00019178 1.4048 0.00087001 619.3168244442 624.320922905579 43.231 0.16048 43.231 43.105 43.265 0 64 12 7 0 0 0 6.1746E-06 1 23402 110.31 81.148 1 0.91989 1.0462 0 118360000 64547000 53812000 36078 1554 13630 14004 56530 56530 VACIGAWHPAR 11 0 1 Unmodified _VACIGAWHPAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B2R7Y3;Q92901 P39023 P39023 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 416.5499 3 413.213475 1236.6186 89700.35 -0.38101 -0.00015744 0.061257 2.5312E-05 -0.31975 -0.00013212 413.213496620504 416.549659408315 51.107 1.0659 51.107 50.869 51.935 0 382 77 11 0 0 0 0.00021123 2 25095 59.426 59.426 1 0.97081 0.83515 0 49880000 24562000 25318000 36079 1554 13630 14004 56531;56532 56532 VACIGAWHPAR 11 0 1 Unmodified _VACIGAWHPAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B2R7Y3;Q92901 P39023 P39023 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.3212 2 619.316574 1236.6186 76779.7 0.28376 0.00017573 -0.16493 -0.00010215 0.11882 7.3588E-05 619.316305466449 624.320692064876 51.118 0.75304 51.118 50.752 51.505 0 209 50 7 0 0 0 0.00095233 2 25072 71.223 60.7 1 0.90415 0.74034 0 13102000 6267800 6833900 36080 1554 13630 14004 56533;56534 56533 VACIGAWHPAR 11 0 1 Unmodified _VACIGAWHPAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B2R7Y3;Q92901 P39023 P39023 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.3205 2 619.316574 1236.6186 74125.34 0.25486 0.00015784 -0.052161 -3.2304E-05 0.20269 0.00012553 619.316494299592 624.320697592488 51.315 0.65512 51.315 50.977 51.632 0 211 42 8 0 0 0 0.00078756 1 24574 72.485 72.485 1 0.94962 0.76746 0 11507000 5772700 5733900 36081 1554 13630 14004 56535 56535 VACIGAWHPAR 11 0 1 Unmodified _VACIGAWHPAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B2R7Y3;Q92901 P39023 P39023 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 416.5495 3 413.213475 1236.6186 90173.16 -0.50041 -0.00020678 0.26974 0.00011146 -0.23067 -9.5317E-05 413.213649815397 416.549709968655 51.344 1.1907 51.344 50.992 52.182 0 359 79 10 0 0 0 0.0039998 1 24604 45.158 45.158 1 1.0047 0.87641 0 41564000 21747000 19817000 36082 1554 13630 14004 56536 56536 VADEMDVMLGQEVGYSIR 18 0 1 2 Oxidation (M) _VADEM(ox)DVM(ox)LGQEVGYSIR_ VADEM(1)DVM(1)LGQEVGYSIR VADEM(104.41)DVM(104.41)LGQEVGYSIR 0 2 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1027.4785 2 1022.47172 2042.92889 NaN NaN NaN 0.48991 0.00050092 NaN NaN NaN NaN 88.745 0.61242 88.745 88.406 89.019 7.6294E-06 0 0 0 3.7085E-14 2 53373 104.41 97.039 1 NaN NaN 0 10064000 0 10064000 36083 1379 13631 14005 56537;56538 56537 1049;1050 VADEMDVMLGQEVGYSIR 18 0 1 2 Oxidation (M) _VADEM(ox)DVM(ox)LGQEVGYSIR_ VADEM(1)DVM(1)LGQEVGYSIR VADEM(69.72)DVM(69.72)LGQEVGYSIR 0 2 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1022.4695 2 1022.47172 2042.92889 NaN NaN NaN -1.5611 -0.0015962 NaN NaN NaN NaN 88.733 0.26897 88.733 88.494 88.763 0 0 0 0 1.5157E-06 2 53417 69.716 64.539 1 NaN NaN 0 7166500 7166500 0 36084 1379 13631 14005 56539;56540 56540 1049;1050 VADEMDVMLGQEVGYSIR 18 0 1 2 Oxidation (M) _VADEM(ox)DVM(ox)LGQEVGYSIR_ VADEM(1)DVM(1)LGQEVGYSIR VADEM(58.32)DVM(58.32)LGQEVGYSIR 0 2 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1027.4823 2 1022.47172 2042.92889 NaN NaN NaN 0.16431 0.000168 NaN NaN NaN NaN 87.841 0.53343 87.841 87.593 88.126 7.6294E-06 0 0 0 0.00010339 1 54033 58.32 48.268 1 NaN NaN 0 11550000 0 11550000 36085 1379 13631 14005 56541 56541 1049;1050 VADGLPLAASMQEDEQSGR 19 0 1 Oxidation (M) _VADGLPLAASM(ox)QEDEQSGR_ VADGLPLAASM(1)QEDEQSGR VADGLPLAASM(44.46)QEDEQSGR 0 1 0 O75396 O75396 O75396 SEC22B Vesicle-trafficking protein SEC22b MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 995.9636 2 995.462743 1988.91093 61877.26 0.52846 0.00052606 -0.26028 -0.0002591 0.26818 0.00026696 995.96359905634 1000.46654857038 68.018 0.52525 68.018 67.723 68.248 0 147 44 5 0 0 0 0.0001387 1 39351 44.457 44.457 1 3.2023 3.3273 0 13563000 4728700 8834400 36086 1403 13632 14006 56542 56542 1082 VADIGLAAWGR 11 0 1 Unmodified _VADIGLAAWGR_ 0 0 0 P23526 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.812 2 564.811648 1127.60874 84978.66 1.0426 0.00058885 -0.05876 -3.3188E-05 0.98379 0.00055566 564.811147737788 569.815814653249 91.242 0.40964 91.242 90.972 91.382 0 62 33 4 0 0 0 0.00032567 1 55217 87.308 76.598 1 1.6823 1.6978 0 7753500 2331200 5422300 36087 1512 13633 14007 56543 56543 VADLTEQYNEQYGAVR 16 0 1 Unmodified _VADLTEQYNEQYGAVR_ 0 0 0 A8K9U0;Q9BWF3 A8K9U0 A8K9U0 RBM4 RNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 933.4499 2 928.44468 1854.87481 64389.82 0.64504 0.00059888 0.18041 0.0001675 0.82545 0.00076639 928.444345390443 933.449506930077 69.054 0.5156 69.054 68.861 69.376 0 185 45 6 0 0 0 1.3462E-08 2 40012 105.03 105.03 1 1.2446 1.2704 0 18790000 7688000 11102000 36088 788 13634 14008 56544;56545 56545 VADLTEQYNEQYGAVR 16 0 1 Unmodified _VADLTEQYNEQYGAVR_ 0 0 0 A8K9U0;Q9BWF3 A8K9U0 A8K9U0 RBM4 RNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 933.4462 2 928.44468 1854.87481 64063.43 0.52797 0.00049019 0.49295 0.00045768 1.0209 0.00094787 928.444306994946 933.450235544379 68.109 0.51579 68.109 67.863 68.379 0 190 41 6 0 0 0 2.9913E-06 2 40265 90.614 90.614 1 1.3276 1.3336 0 19164000 8046300 11117000 36089 788 13634 14008 56546;56547 56546 VADLTEQYNEQYGAVR 16 0 1 Unmodified _VADLTEQYNEQYGAVR_ 0 0 0 A8K9U0;Q9BWF3 A8K9U0 A8K9U0 RBM4 RNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 933.451 2 928.44468 1854.87481 64853.51 0.34781 0.00032292 0.33569 0.00031167 0.6835 0.00063459 928.946409994181 933.449807603566 79.712 0.54102 79.712 79.39 79.931 0 151 33 6 0 0 0 0.015652 2 42151 30.858 30.858 1 0.88723 0.78222 0 2462300 1209000 1253300 36090 788 13634 14008 56548;56549 56549 VADMALHYANK 11 1 0 Oxidation (M) _VADM(ox)ALHYANK_ VADM(1)ALHYANK VADM(96.95)ALHYANK 0 1 0 Q7Z759;Q53HU0;P50990;H7C4C8 Q7Z759 Q7Z759 CCT8 T-complex protein 1 subunit theta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.8132 2 624.805705 1247.59686 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.968 1 24.968 24.468 25.468 1.9073E-06 0 0 0 1.648E-06 1 10629 96.948 81.066 1 36091 1592 13635 14009 56550 56550 1376 VADNAQQQYVR 11 0 1 Unmodified _VADNAQQQYVR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.3238 2 646.323108 1290.63166 NaN NaN NaN 1.468 0.00094878 NaN NaN NaN NaN 24.26 0.54309 24.26 23.995 24.538 0 0 0 0 4.0205E-40 1 10020 207.29 155.43 1 NaN NaN 0 23370000 23370000 0 36092 1933 13636 14010 56551 56551 VADNAQQQYVR 11 0 1 Unmodified _VADNAQQQYVR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3229 2 646.323108 1290.63166 76095.71 0.42177 0.0002726 -0.056874 -3.6759E-05 0.3649 0.00023584 646.323081635824 651.327353296121 24.042 0.70272 24.042 23.701 24.403 0 130 27 9 0 0 0 3.9956E-66 1 9814 223.32 209.87 1 0.9421 1.0737 0 101870000 53931000 47941000 36093 1933 13636 14010 56552 56552 VADNAQQQYVR 11 0 1 Unmodified _VADNAQQQYVR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.3236 2 646.323108 1290.63166 76036.05 0.63353 0.00040946 -0.044782 -2.8943E-05 0.58875 0.00038052 646.323071905421 651.327136958317 27.263 0.62521 27.263 26.96 27.585 1.9073E-06 147 29 8 0 0 0 7.0847E-10 2 10500 135.71 135.71 1 1.2471 1.0286 0 11590000 4769600 6820300 36094 1933 13636 14010 56553;56554 56554 VADNAQQQYVR 11 0 1 Unmodified _VADNAQQQYVR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.3276 2 646.323108 1290.63166 74702.57 0.30705 0.00019845 -0.016225 -1.0487E-05 0.29083 0.00018797 646.323085601135 651.327221314412 27.444 0.57341 27.444 27.091 27.664 1.9073E-06 129 22 8 0 0 0 2.2179E-05 2 10076 129.63 129.63 1 1.2841 1.0539 0 8757200 3832700 4924500 36095 1933 13636 14010 56555;56556 56555 VADNLAIQLAAVTEDK 16 1 0 Unmodified _VADNLAIQLAAVTEDK_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7;K7EKJ9;K7EKY0;K7ER69;K7EQR9 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 839.9578 2 835.951609 1669.88867 NaN NaN NaN -0.038626 -3.2289E-05 NaN NaN NaN NaN 110.79 0.28111 110.79 110.65 110.93 7.6294E-06 0 0 0 2.1247E-09 1 69624 104.41 80.118 1 NaN NaN 0 8196800 0 8196800 36096 220 13637 14011 56557 56557 VADNLAIQLAAVTEDK 16 1 0 Unmodified _VADNLAIQLAAVTEDK_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7;K7EKJ9;K7EKY0;K7ER69;K7EQR9 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 836.4564 2 835.951609 1669.88867 NaN NaN NaN 0.72222 0.00060374 NaN NaN NaN NaN 110.8 0.28111 110.8 110.65 110.93 -7.6294E-06 0 0 0 2.0944E-18 1 69638 124.07 90.198 1 NaN NaN 0 8446600 8446600 0 36097 220 13637 14011 56558 56558 VADPVVTFCETVVETSSLK 19 1 0 Unmodified _VADPVVTFCETVVETSSLK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1045.5358 2 1041.02719 2080.03982 61430.02 0.51638 0.00053756 -0.22747 -0.0002368 0.28891 0.00030076 1041.02718452336 1045.53538904091 120.98 0.39669 120.98 120.8 121.2 -7.6294E-06 87 22 7 0 0 0 4.5058E-05 2 80045 49.482 41.757 1 0.80818 0.82152 0 16798000 7939400 8858400 36098 794 13638 14012 56559;56560 56559 VADPVVTFCETVVETSSLK 19 1 0 Unmodified _VADPVVTFCETVVETSSLK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1045.5348 2 1041.02719 2080.03982 62839.94 0.83586 0.00087015 -1.8852 -0.0019625 -1.0493 -0.0010924 1041.52795102716 1045.53335505395 134.16 0.35095 134.16 134 134.35 -1.5259E-05 67 16 7 0 0 0 0.0075928 1 81843 28.976 23.799 1 0.74988 0.59111 0 5870800 3241600 2629100 36099 794 13638 14012 56561 56561 VADWTGATYQDK 12 1 0 Unmodified _VADWTGATYQDK_ 0 0 0 O15371;B0QYA5;B0QYA6;B0QYA8 O15371 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 681.8248 2 677.817324 1353.62009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.148 1 47.148 46.648 47.648 0 0 0 0 0.031674 1 26139 44.847 20.817 1 36100 1378 13639 14013 56562 56562 VAEAAIQIFR 10 0 1 Unmodified _VAEAAIQIFR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.3218 2 559.321848 1116.62914 83726.31 0.60564 0.00033875 0.079759 4.4611E-05 0.6854 0.00038336 559.322064456406 564.32583262949 89.026 0.32267 89.026 88.763 89.086 0 61 22 7 0 0 0 1.6945E-09 1 53719 130.75 96.495 1 0.71164 0.77141 0 49698000 28996000 20702000 36101 1270 13640 14014 56563 56563 VAEAAIQIFR 10 0 1 Unmodified _VAEAAIQIFR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.3261 2 559.321848 1116.62914 84043.07 0.93415 0.00052249 0.40844 0.00022845 1.3426 0.00075094 559.321971937151 564.326272361157 87.891 0.18088 87.891 87.794 87.974 0 43 12 7 0 0 0 5.0494E-10 1 54204 135.83 100.54 1 0.71226 0.7808 0 40052000 25816000 14236000 36102 1270 13640 14014 56564 56564 VAEAAIQIFR 10 0 1 Unmodified _VAEAAIQIFR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.3223 2 559.321848 1116.62914 78975.97 0.4454 0.00024912 0.49697 0.00027797 0.94237 0.00052709 559.322254088267 564.325978410176 101.74 0.23867 101.74 101.6 101.84 -7.6294E-06 38 15 6 0 0 0 0.0071254 2 57686 57.859 35.504 1 0.72468 0.62037 0 2746500 1440700 1305900 36103 1270 13640 14014 56565;56566 56566 VAEAAIQIFR 10 0 1 Unmodified _VAEAAIQIFR_ 0 0 0 G1UI16;Q29RF7 G1UI16 G1UI16 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 559.3217 2 559.321848 1116.62914 83730.28 0.50458 0.00028222 0.1223 6.8404E-05 0.62688 0.00035063 559.823018556693 564.326119810669 101.52 0.19987 101.52 101.41 101.61 0 33 11 5 0 0 0 0.009241 1 56694 54.982 32.896 1 0.8114 0.68805 0 3009500 2012400 997040 36104 1270 13640 14014 56567 56567 VAEDEAEAAAAAK 13 1 0 Unmodified _VAEDEAEAAAAAK_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;A0A024R599;F5H0E2;H0YFS2;F5H867;B4E3E4 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.3076 2 623.301507 1244.58846 NaN NaN NaN -0.55408 -0.00034536 NaN NaN NaN NaN 26.873 0.38991 26.873 26.751 27.141 1.9073E-06 0 0 0 0.0022155 1 12184 70.942 45.205 1 NaN NaN 0 4430000 0 4430000 36105 1072 13641 14015 56568 56568 VAEDEAEAAAAAK 13 1 0 Unmodified _VAEDEAEAAAAAK_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;A0A024R599;F5H0E2;H0YFS2;F5H867;B4E3E4 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3111 2 623.301507 1244.58846 77310.8 0.63974 0.00039875 -0.61235 -0.00038168 0.027389 1.7072E-05 623.301780215819 627.308882520011 26.516 0.36307 26.516 26.338 26.701 0 60 19 6 0 0 0 0.00011207 1 11856 74.944 64.794 1 1.317 1.3345 0 12957000 6247100 6710400 36106 1072 13641 14015 56569 56569 VAEDEAEAAAAAK 13 1 0 Unmodified _VAEDEAEAAAAAK_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;A0A024R599;F5H0E2;H0YFS2;F5H867;B4E3E4 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.309 2 623.301507 1244.58846 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.071 1 31.071 30.571 31.571 1.9073E-06 0 0 0 0.0096516 1 13046 54.471 29.548 1 36107 1072 13641 14015 56570 56570 VAEDEAEAAAAAK 13 1 0 Unmodified _VAEDEAEAAAAAK_ 0 0 0 B4E2Z3;F5GZS6;J3KPF3;P08195;A0A024R599;F5H0E2;H0YFS2;F5H867;B4E3E4 B4E2Z3 B4E2Z3 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.8082 2 623.301507 1244.58846 74647.8 0.49561 0.00030891 -2.6359 -0.001643 -2.1403 -0.001334 623.302035277195 627.805927920112 31.355 0.55882 31.355 31.095 31.654 0 134 28 7 0 0 0 0.0025719 2 12801 53.211 42.286 1 1.2497 0.97577 0 3437200 1520300 1916900 36108 1072 13641 14015 56571;56572 56571 VAEEHAPSIVFIDEIDAIGTK 21 1 0 Unmodified _VAEEHAPSIVFIDEIDAIGTK_ 0 0 0 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.0675 3 752.058236 2253.15288 71323.46 0.98073 0.00073757 -0.38579 -0.00029014 0.59494 0.00044743 752.726637127584 755.063821050696 117.12 0.52521 117.12 116.84 117.36 0 155 38 8 0 0 0 9.7425E-08 3 74784 60.602 60.602 1 2.2006 2.2977 0 15031000 4849100 10182000 36109 1634 13642 14016 56573;56574;56575 56573 VAEEHAPSIVFIDEIDAIGTK 21 1 0 Unmodified _VAEEHAPSIVFIDEIDAIGTK_ 0 0 0 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.0654 3 752.058236 2253.15288 71105.73 0.71193 0.00053541 -0.24099 -0.00018124 0.47095 0.00035418 752.058309333382 754.729797828379 116.49 0.41876 116.49 116.24 116.66 0 149 26 8 0 0 0 7.7679E-09 2 76089 76.704 76.704 1 1.9113 1.9304 0 26810000 7214900 19595000 36110 1634 13642 14016 56576;56577 56576 VAEELALEQAK 11 1 0 Unmodified _VAEELALEQAK_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.8342 2 600.82716 1199.63977 79757.02 0.86732 0.00052111 -0.23152 -0.0001391 0.6358 0.00038201 600.826856034158 604.834196937842 56.116 0.63411 56.116 55.865 56.499 0 284 52 7 0 0 0 5.028E-14 2 31527 150.35 111.33 1 1.1665 1.3098 0 68202000 30786000 37416000 36111 664 13643 14017 56578;56579 56579 VAEELALEQAK 11 1 0 Unmodified _VAEELALEQAK_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.3353 2 600.82716 1199.63977 78849.19 0.47111 0.00028305 -0.10923 -6.5628E-05 0.36188 0.00021743 600.82706963813 604.834220212601 55.201 0.6181 55.201 54.905 55.523 0 264 46 7 0 0 0 7.8817E-10 3 31510 125.57 96.096 1 1.2643 1.413 0 97019000 41031000 55988000 36112 664 13643 14017 56580;56581;56582 56582 VAEELALEQAK 11 1 0 Unmodified _VAEELALEQAK_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 604.8345 2 600.82716 1199.63977 79424.4 0.66174 0.00039759 -0.17207 -0.00010339 0.48967 0.00029421 600.826991537587 604.83426110001 65.273 0.62878 65.273 65.004 65.633 0 186 47 7 0 0 0 0.0012566 2 33619 68.893 41.778 1 1.6761 1.328 0 4865700 1761700 3104100 36113 664 13643 14017 56583;56584 56583 VAEELALEQAK 11 1 0 Unmodified _VAEELALEQAK_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.8344 2 600.82716 1199.63977 79429.62 0.4318 0.00025944 -0.68647 -0.00041245 -0.25467 -0.00015301 600.827129617442 604.833785691843 65.741 0.51398 65.741 65.512 66.026 -7.6294E-06 186 40 7 0 0 0 0.0082766 1 33159 51.092 29.628 1 1.5001 1.1881 0 3169100 1115800 2053300 36114 664 13643 14017 56585 56585 VAEFSLSGSQR 11 0 1 Unmodified _VAEFSLSGSQR_ 0 0 0 A8K4P8;Q14146;Q6PCC8 A8K4P8 A8K4P8 URB2 Unhealthy ribosome biogenesis protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.8016 2 590.801477 1179.5884 81070.09 0.80609 0.00047624 -0.23319 -0.00013777 0.57291 0.00033847 590.80135742071 595.805793747091 52.585 0.75145 52.585 52.155 52.907 3.8147E-06 122 58 4 0 0 0 0.0053568 1 29961 56.359 42.152 1 1.0804 1.0733 0 8681000 4403800 4277300 36115 738 13644 14018 56586 56586 VAEITELILK 10 1 0 Unmodified _VAEITELILK_ 0 0 0 B4DXG8;A5PLM5;Q06265;D6RIY6;D6R905;H0Y9L5 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.8481 2 564.847364 1127.68018 81944.96 1.0948 0.00061841 0.15437 8.7193E-05 1.2492 0.0007056 564.84739903028 568.854470666386 108.7 0.74229 108.7 108.41 109.15 0 192 49 6 0 0 0 7.8785E-05 2 67926 98.033 98.033 1 0.8542 0.91986 0 33514000 16618000 16896000 36116 675 13645 14019 56587;56588 56588 VAEITELILK 10 1 0 Unmodified _VAEITELILK_ 0 0 0 B4DXG8;A5PLM5;Q06265;D6RIY6;D6R905;H0Y9L5 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8475 2 564.847364 1127.68018 81618.9 0.74622 0.0004215 -0.10526 -5.9456E-05 0.64096 0.00036205 564.847235267394 568.854278881674 108.02 0.7309 108.02 107.72 108.45 0 226 52 6 0 0 0 2.4826E-06 2 69031 110.87 96.202 1 0.82084 0.87735 0 21085000 12227000 8858300 36117 675 13645 14019 56589;56590 56590 VAEITELILK 10 1 0 Unmodified _VAEITELILK_ 0 0 0 B4DXG8;A5PLM5;Q06265;D6RIY6;D6R905;H0Y9L5 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.8479 2 564.847364 1127.68018 80995.23 0.56549 0.00031941 0.061121 3.4524E-05 0.62661 0.00035394 564.847406919875 568.8543838859 120.18 0.68033 120.18 119.94 120.62 0 136 29 6 0 0 0 0.0015298 2 71237 73.233 73.233 1 1.0548 0.84179 0 6898200 3133200 3765000 36118 675 13645 14019 56591;56592 56591 VAEITELILK 10 1 0 Unmodified _VAEITELILK_ 0 0 0 B4DXG8;A5PLM5;Q06265;D6RIY6;D6R905;H0Y9L5 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.8478 2 564.847364 1127.68018 82180.09 0.72955 0.00041209 -0.045447 -2.5671E-05 0.68411 0.00038642 564.84734114665 568.854381867403 119.87 0.69604 119.87 119.68 120.37 0 126 30 6 0 0 0 0.013553 2 70133 49.418 49.418 1 0.98056 0.79997 0 7881700 3762500 4119200 36119 675 13645 14019 56593;56594 56593 VAELLLLHGAEPNCADPATLTR 22 0 1 Unmodified _VAELLLLHGAEPNCADPATLTR_ 0 0 0 J3QRG6;K7PML8;P42771;K7ES20;L8E941;K7ENC6;D1LYX3;K7PPU3;R9S252;P42772 J3QRG6 J3QRG6 CDKN2A;CDKN2B;p16ink4a Cyclin-dependent kinase inhibitor 2A;Cyclin-dependent kinase 4 inhibitor B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.4172 3 787.745886 2360.21583 70471.82 0.46554 0.00036673 0.73884 0.00058202 1.2044 0.00094875 788.41541597012 791.41734489505 102.54 0.55803 102.54 102.26 102.82 0 153 46 6 0 0 0 0.0010053 3 63114 29.476 29.476 1 2.0891 2.1419 0 10081000 3816400 6264300 36120 1339 13646 14020 56595;56596;56597 56597 VAELLLLHGAEPNCADPATLTR 22 0 1 Unmodified _VAELLLLHGAEPNCADPATLTR_ 0 0 0 J3QRG6;K7PML8;P42771;K7ES20;L8E941;K7ENC6;D1LYX3;K7PPU3;R9S252;P42772 J3QRG6 J3QRG6 CDKN2A;CDKN2B;p16ink4a Cyclin-dependent kinase inhibitor 2A;Cyclin-dependent kinase 4 inhibitor B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.0833 3 787.745886 2360.21583 70245.73 0.53033 0.00041776 0.75064 0.00059131 1.281 0.0010091 788.415298585107 791.417564059522 101.79 0.47916 101.79 101.46 101.94 0 131 37 6 0 0 0 4.8012E-09 2 64051 75.358 75.358 1 1.9651 1.9543 0 11820000 4775200 7045000 36121 1339 13646 14020 56598;56599 56598 VAFDPEQK 8 1 0 Unmodified _VAFDPEQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.2448 2 467.23745 932.460347 90096.74 0.55344 0.00025859 0.5316 0.00024838 1.085 0.00050697 467.237392633125 471.244618733151 35.905 0.71354 35.905 35.664 36.378 0 236 68 5 0 0 0 0.013558 2 18146 65.038 62.464 1 0.94763 0.93626 0 25569000 12154000 13415000 36122 1740 13647 14021 56600;56601 56600 VAFDPEQK 8 1 0 Unmodified _VAFDPEQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2372 2 467.23745 932.460347 89816.8 0.71303 0.00033316 0.36959 0.00017268 1.0826 0.00050584 467.237496817688 471.244678045523 35.208 0.51514 35.208 34.899 35.414 0 177 46 6 0 0 0 0.011754 2 17813 69.198 69.198 1 0.92943 1.0315 0 48742000 24768000 23974000 36123 1740 13647 14021 56602;56603 56603 VAFDPEQK 8 1 0 Unmodified _VAFDPEQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 471.245 2 467.23745 932.460347 89067.4 0.10573 4.9399E-05 0.57977 0.00027089 0.6855 0.00032029 467.237498424501 471.244759861648 40.74 0.70031 40.74 40.39 41.091 0 261 57 7 0 0 0 0.024726 2 18810 55.676 55.676 1 1.6228 1.2972 0 8957800 3315400 5642300 36124 1740 13647 14021 56604;56605 56604 VAFHPARPFLLVASQR 16 0 2 Unmodified _VAFHPARPFLLVASQR_ 0 0 1 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 453.2628 4 453.012516 1808.02096 92315.24 0.16975 7.69E-05 -0.46787 -0.00021195 -0.29811 -0.00013505 453.01222456464 458.016385060631 92.493 0.30301 92.493 92.265 92.568 0 78 29 4 0 0 0 0.039815 1 55917 15.884 15.884 1 1.0407 1.1545 0 10380000 5792200 4587300 36125 1726 13648 14022 56606 56606 VAFHPARPFLLVASQR 16 0 2 Unmodified _VAFHPARPFLLVASQR_ 0 0 1 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 458.0168 4 453.012516 1808.02096 89284.27 0.076066 3.4459E-05 -0.19595 -8.8768E-05 -0.11988 -5.4309E-05 453.01237631178 458.01657198274 94.663 0.86776 94.663 94.453 95.32 7.6294E-06 314 57 10 0 0 0 0.062519 1 52082 10.615 10.615 1 1.4296 1.3093 0 10485000 3886500 6598500 36126 1726 13648 14022 56607 56607 VAFITGGGTGLGK 13 1 0 Unmodified _VAFITGGGTGLGK_ 0 0 0 E5RJD2;E5RJG7;Q7LDK6;E5RFV2;A0A024R9D7;Q16698;E5RID6 E5RJD2 E5RJD2 DECR1;DECR 2,4-dienoyl-CoA reductase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3392 2 589.332413 1176.65027 84364.42 0.7689 0.00045314 0.67383 0.00039711 1.4427 0.00085025 589.332332417238 593.33934923373 74.314 0.3378 74.314 74.173 74.511 0 95 28 6 0 0 0 0.0020343 1 44721 55.401 55.401 1 0.95547 0.9659 0 8717300 4020800 4696500 36127 277 13649 14023 56608 56608 VAFSVAR 7 0 1 Unmodified _VAFSVAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 375.2188 2 375.218863 748.423173 97213.34 0.30291 0.00011366 -0.26368 -9.8936E-05 0.039236 1.4722E-05 375.218768434549 380.222823445996 42.691 0.91775 42.691 42.456 43.374 0 321 74 9 0 0 0 0.01383 2 22636 101.72 19.858 1 1.0422 1.2394 0 1323600000 612680000 710970000 36128 1554;936 13650 14024 56609;56610 56609 VAFSVAR 7 0 1 Unmodified _VAFSVAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 375.2188 2 375.218863 748.423173 96168.17 0.39631 0.0001487 0.48425 0.0001817 0.88056 0.0003304 375.218973647179 380.223062528148 41.263 1.4384 41.263 40.939 42.377 0 550 125 7 0 0 0 2.5674E-11 4 22535 170.43 27.254 1 0.95773 1.1209 0 657860000 312860000 345000000 36129 1554;936 13650 14024 56611;56612;56613;56614 56613 VAFSVAR 7 0 1 Unmodified _VAFSVAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 375.2186 2 375.218863 748.423173 96807.63 -0.067047 -2.5157E-05 0.28259 0.00010603 0.21555 8.0877E-05 375.218900933586 380.223000341487 48.106 1.1437 48.106 47.946 49.089 0 361 87 8 0 0 0 0.014567 2 23370 99.919 24.609 1 1.0595 0.91598 0 110990000 53740000 57252000 36130 1554;936 13650 14024 56615;56616 56616 VAFSVAR 7 0 1 Unmodified _VAFSVAR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;B5MCW2;B3KS36 P39023;B3KS36 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 375.2191 2 375.218863 748.423173 97455.91 -0.22575 -8.4704E-05 0.35054 0.00013153 0.12479 4.6823E-05 375.218856026612 380.222996236459 48.092 2.0043 48.092 47.756 49.76 -3.8147E-06 686 163 8 0 0 0 0.026711 2 22848 76.847 5.6474 1 1.0288 0.89747 0 27808000 12902000 14906000 36131 1554;936 13650 14024 56617;56618 56618 VAFVDMLLK 9 1 0 Unmodified _VAFVDMLLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.3062 2 518.298996 1034.58344 NaN NaN NaN -0.093733 -4.8582E-05 NaN NaN NaN NaN 117.49 0.45902 117.49 117.21 117.67 0 0 0 0 0.016072 1 77116 61.962 33.45 1 NaN NaN 0 1724300 0 1724300 36132 1887 13651 14025 56619 56619 VAFVDMLLK 9 1 0 Unmodified _VAFVDMLLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.306 2 518.298996 1034.58344 87398.16 0.41458 0.00021488 -0.055785 -2.8913E-05 0.3588 0.00018596 518.298887644288 522.305937824522 129.89 0.48615 129.89 129.67 130.15 0 81 22 6 0 0 0 0.035569 1 78592 43.808 39.671 1 2.1774 1.8158 0 2241700 694600 1547100 36133 1887 13651 14025 56620 56620 VAFVDMLLK 9 1 0 Unmodified _VAFVDMLLK_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.3064 2 518.298996 1034.58344 86402.44 0.70106 0.00036336 0.13389 6.9397E-05 0.83496 0.00043276 518.298984375535 522.306137488137 129.7 0.51973 129.7 129.46 129.98 -1.5259E-05 73 19 5 0 0 0 0.039815 2 77487 42.109 37.972 1 1.9566 1.6448 0 1493500 498100 995380 36134 1887 13651 14025 56621;56622 56621 VAFVDMLLK 9 1 0 Oxidation (M) _VAFVDM(ox)LLK_ VAFVDM(1)LLK VAFVDM(42.11)LLK 0 1 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.8049 2 526.296453 1050.57835 90968.68 0.44276 0.00023302 -0.15338 -8.0725E-05 0.28938 0.0001523 526.296455146114 530.303280393364 129.88 0.38814 129.88 129.69 130.08 0 41 17 4 0 0 0 0.019289 1 78628 42.109 16.372 1 1.3737 1.2078 0 997630 388820 608810 36135 1887 13651 14026 56623 56623 1736 VAFVDMLLK 9 1 0 Oxidation (M) _VAFVDM(ox)LLK_ VAFVDM(1)LLK VAFVDM(41.03)LLK 0 1 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.3036 2 526.296453 1050.57835 88749.98 0.59419 0.00031272 0.053663 2.8242E-05 0.64785 0.00034096 526.296535028011 530.303426929933 116.61 0.46156 116.61 116.26 116.72 0 57 20 4 0 0 0 0.020597 1 67667 41.029 16.106 1 1.341 1.181 0 1178300 470950 707390 36136 1887 13651 14026 56624 56624 1736 VAFVIPPVVAAPPSLR 16 0 1 Unmodified _VAFVIPPVVAAPPSLR_ 0 0 0 Q96L91;A7E2D7 Q96L91 Q96L91 EP400 E1A-binding protein p400 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.9958 2 816.995426 1631.9763 70451.73 1.0507 0.00085841 -0.06972 -5.6961E-05 0.98097 0.00080145 816.995103004314 822.500842191147 126.54 0.44386 126.54 126.31 126.76 0 144 33 6 0 0 0 0.0019286 2 82308 43.084 43.084 1 0.77813 0.78355 0 7815300 4074600 3740700 36137 1977 13652 14027 56625;56626 56626 VAFVIPPVVAAPPSLR 16 0 1 Unmodified _VAFVIPPVVAAPPSLR_ 0 0 0 Q96L91;A7E2D7 Q96L91 Q96L91 EP400 E1A-binding protein p400 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.0059 2 816.995426 1631.9763 69065.8 1.0759 0.00087903 -0.3318 -0.00027108 0.74413 0.00060795 817.496876996291 821.999538677435 126.09 0.43518 126.09 125.9 126.33 7.6294E-06 120 26 7 0 0 0 0.0029104 3 83963 38.875 38.875 1 0.70786 0.70144 0 12143000 6873300 5269800 36138 1977 13652 14027 56627;56628;56629 56627 VAGALVQNTEK 11 1 0 Unmodified _VAGALVQNTEK_ 0 0 0 Q9UPN7 Q9UPN7 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.3232 2 565.31422 1128.61389 NaN NaN NaN -0.55984 -0.00031649 NaN NaN NaN NaN 28.802 0.18142 28.802 28.719 28.901 0 0 0 0 0.001528 1 13712 82.645 53.172 1 NaN NaN 0 6926400 0 6926400 36139 2117 13653 14028 56630 56630 VAGFDLDGTLITTR 14 0 1 Unmodified _VAGFDLDGTLITTR_ 0 0 0 M0R3C8;A0A0D9SFL2;M0QYH2;A0A1S5RA93;Q96T60;M0QYI1 M0R3C8 M0R3C8 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.9026 2 739.896106 1477.77766 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.39 1 109.39 108.89 109.89 0 0 0 0 0.00076458 1 70214 79.693 61.829 1 36140 526 13654 14029 56631 56631 VAGHPLAQNER 11 0 1 Unmodified _VAGHPLAQNER_ 0 0 0 O60493 O60493 O60493 SNX3 Sorting nexin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3193 2 596.315086 1190.61562 80251.62 0.33686 0.00020088 0.79532 0.00047426 1.1322 0.00067513 596.315314407689 601.319820429399 16.484 0.12626 16.484 16.41 16.536 0 26 6 5 0 0 0 0.0055485 1 3628 56.013 48.533 1 2.9387 3.2208 0 1978700 496690 1482100 36141 1395 13655 14030 56632 56632 VAGHPNIVINNAAGNFISPTER 22 0 1 Unmodified _VAGHPNIVINNAAGNFISPTER_ 0 0 0 E5RJD2;E5RJG7;Q7LDK6;E5RFV2;A0A024R9D7;Q16698 E5RJD2 E5RJD2 DECR1;DECR 2,4-dienoyl-CoA reductase, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.7363 3 764.401219 2290.18183 NaN NaN NaN -0.24311 -0.00018583 NaN NaN NaN NaN 85.851 0.28085 85.851 85.722 86.002 0 0 0 0 0.003117 1 52953 34.793 24.834 1 NaN NaN 0 7092500 7092500 0 36142 277 13656 14031 56633 56633 VAGHSLGYGFVNYVTAK 17 1 0 Unmodified _VAGHSLGYGFVNYVTAK_ 0 0 0 Q15717;M0QZR9 Q15717 Q15717 ELAVL1 ELAV-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.9839 3 594.9773 1781.91007 79515.46 0.91945 0.00054705 -0.15559 -9.2574E-05 0.76386 0.00045448 594.977091045966 597.648448648421 85.772 0.77585 85.772 85.292 86.067 0 183 58 5 0 0 0 0.00048615 1 52802 39.849 39.849 1 1.7246 1.7601 0 31282000 12868000 18414000 36143 1764 13657 14032 56634 56634 VAGIESHSELQISR 14 0 1 Unmodified _VAGIESHSELQISR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.9032 2 763.402086 1524.78962 69655.47 0.61249 0.00046758 0.25648 0.0001958 0.86898 0.00066338 763.904180147816 768.406139280676 50.622 0.28153 50.622 50.469 50.75 -3.8147E-06 54 27 4 0 0 0 0.00016758 3 28012 73.951 54.176 1 0.57255 0.58853 0 25303000 12773000 12530000 36144 186;1747 13658 14033 56635;56636;56637 56637 VAGIESHSELQISR 14 0 1 Unmodified _VAGIESHSELQISR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.6058 3 509.270483 1524.78962 83931.8 0.38584 0.0001965 -0.24809 -0.00012635 0.13775 7.015E-05 509.270547584546 512.606093025349 50.594 0.51126 50.594 50.32 50.831 -3.8147E-06 237 48 7 0 0 0 4.948E-05 1 27894 59.607 48.82 1 0.74896 0.8336 0 78557000 44191000 34365000 36145 186;1747 13658 14033 56638 56638 VAGIESHSELQISR 14 0 1 Unmodified _VAGIESHSELQISR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.4026 2 763.402086 1524.78962 NaN NaN NaN 0.32415 0.00024746 NaN NaN NaN NaN 50.606 0.32368 50.606 50.459 50.783 0 0 0 0 6.533E-11 1 27901 117.86 89.133 1 NaN NaN 0 20075000 20075000 0 36146 186;1747 13658 14033 56639 56639 VAGIESHSELQISR 14 0 1 Unmodified _VAGIESHSELQISR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.9039 2 763.402086 1524.78962 69653.43 0.65729 0.00050178 0.11602 8.8568E-05 0.77331 0.00059035 763.903667860201 768.406178776329 49.011 0.29224 49.011 48.898 49.19 0 79 23 6 0 0 0 1.2557E-37 3 27535 168.02 123.7 1 1.045 1.1437 0 33327000 16413000 16914000 36147 186;1747 13658 14033 56640;56641;56642 56642 VAGIESHSELQISR 14 0 1 Unmodified _VAGIESHSELQISR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.9406 3 509.270483 1524.78962 83804.86 0.4067 0.00020712 -0.20776 -0.00010581 0.19893 0.00010131 509.270540676122 512.60629736589 49.014 0.48271 49.014 48.788 49.271 0 188 40 7 0 0 0 2.7267E-07 1 27491 87.083 77.011 1 0.86848 0.99468 0 84588000 39792000 44796000 36148 186;1747 13658 14033 56643 56643 VAGIESHSELQISR 14 0 1 Unmodified _VAGIESHSELQISR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.4039 2 763.402086 1524.78962 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.18 1 49.18 48.68 49.68 0 0 0 0 0.042793 1 27640 41.399 9.9777 1 36149 186;1747 13658 14033 56644 56644 VAGIESHSELQISR 14 0 1 Unmodified _VAGIESHSELQISR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.2707 3 509.270483 1524.78962 84372.68 0.43721 0.00022266 0.069141 3.5211E-05 0.50635 0.00025787 509.270624774447 512.606511026068 58.251 0.75421 58.251 57.949 58.703 0 306 56 7 0 0 0 0.0026753 2 29614 31.095 31.095 1 1.3897 1.1943 0 7898900 3139200 4759700 36150 186;1747 13658 14033 56645;56646 56646 VAGIESHSELQISR 14 0 1 Unmodified _VAGIESHSELQISR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 512.9414 3 509.270483 1524.78962 83809.4 0.32482 0.00016542 0.056304 2.8674E-05 0.38112 0.0001941 509.270686219308 512.606429404861 58.694 0.77986 58.694 58.373 59.153 0 305 61 6 0 0 0 0.048663 2 29107 18.096 18.096 1 1.4175 1.176 0 5100300 2087000 3013300 36151 186;1747 13658 14033 56647;56648 56647 VAGLGTPSFAPYEANVDFEIR 21 0 1 Unmodified _VAGLGTPSFAPYEANVDFEIR_ 0 0 0 M0QZR8;Q59FA0;A0A024R4F4;M0R2B7;P28340;Q308M6 M0QZR8 M0QZR8 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1132.5728 2 1127.06295 2252.11135 58369.39 0.5022 0.00056601 0.32615 0.00036759 0.82834 0.00093359 1127.56516775506 1132.06762423181 119.99 0.33857 119.99 119.81 120.15 0 70 24 4 0 0 0 0.0032569 1 79198 30.483 30.483 1 0.88434 0.87562 0 12277000 5627900 6649100 36152 155 13659 14034 56649 56649 VAGQDGSVVQFK 12 1 0 Unmodified _VAGQDGSVVQFK_ 0 0 0 A0A024R8S3;P61956;Q6EEV6 A0A024R8S3 A0A024R8S3 SUMO2;SUMO4 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.8258 2 617.824952 1233.63535 77380.09 0.57011 0.00035223 0.056321 3.4796E-05 0.62643 0.00038703 617.824999008757 621.832001052598 50.692 0.93664 50.692 50.244 51.181 0 309 87 7 0 0 0 0.00020091 1 27817 78.939 78.939 1 0.79833 0.94842 0 550090000 311670000 238420000 36153 256 13660 14035 56650 56650 VAGQDGSVVQFK 12 1 0 Unmodified _VAGQDGSVVQFK_ 0 0 0 A0A024R8S3;P61956;Q6EEV6 A0A024R8S3 A0A024R8S3 SUMO2;SUMO4 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8321 2 617.824952 1233.63535 77380.09 0.54621 0.00033746 -0.012257 -7.5727E-06 0.53396 0.00032989 618.326425366153 621.831986198792 50.64 0.32573 50.64 50.343 50.668 3.8147E-06 173 31 7 0 0 0 1.0535E-12 1 27829 130.98 130.98 1 0.91122 1.079 0 445650000 176720000 268930000 36154 256 13660 14035 56651 56651 VAGQDGSVVQFK 12 1 0 Unmodified _VAGQDGSVVQFK_ 0 0 0 A0A024R8S3;P61956;Q6EEV6 A0A024R8S3 A0A024R8S3 SUMO2;SUMO4 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8322 2 617.824952 1233.63535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.469 1 51.469 50.969 51.969 0 0 0 0 0.014476 1 28477 54.539 31.799 1 36155 256 13660 14035 56652 56652 VAGQDGSVVQFK 12 1 0 Unmodified _VAGQDGSVVQFK_ 0 0 0 A0A024R8S3;P61956;Q6EEV6 A0A024R8S3 A0A024R8S3 SUMO2;SUMO4 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8028 2 617.824952 1233.63535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.483 1 51.483 50.983 51.983 0 0 0 0 0.0046082 1 28486 64.841 42.101 1 36156 256 13660 14035 56653 56653 VAGQDGSVVQFK 12 1 0 Unmodified _VAGQDGSVVQFK_ 0 0 0 A0A024R8S3;P61956;Q6EEV6 A0A024R8S3 A0A024R8S3 SUMO2;SUMO4 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8317 2 617.824952 1233.63535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.322 1 52.322 51.822 52.822 0 0 0 0 0.00012389 1 29064 89.08 60.353 1 36157 256 13660 14035 56654 56654 VAGQDGSVVQFK 12 1 0 Unmodified _VAGQDGSVVQFK_ 0 0 0 A0A024R8S3;P61956;Q6EEV6 A0A024R8S3 A0A024R8S3 SUMO2;SUMO4 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.8242 2 617.824952 1233.63535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.569 1 52.569 52.069 53.069 0 0 0 0 0.031645 1 29247 44.863 30.19 1 36158 256 13660 14035 56655 56655 VAGQDGSVVQFK 12 1 0 Unmodified _VAGQDGSVVQFK_ 0 0 0 A0A024R8S3;P61956;Q6EEV6 A0A024R8S3 A0A024R8S3 SUMO2;SUMO4 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8248 2 617.824952 1233.63535 76775.95 0.36264 0.00022405 0.16536 0.00010216 0.528 0.00032621 617.825119324282 621.832112424727 49.452 1.0795 49.452 49.104 50.184 0 672 91 10 0 0 0 3.5555E-60 3 27671 208.63 189.65 1 0.93509 1.1012 0 487670000 244990000 242680000 36159 256 13660 14035 56656;56657;56658 56657 VAGQDGSVVQFK 12 1 0 Unmodified _VAGQDGSVVQFK_ 0 0 0 A0A024R8S3;P61956;Q6EEV6 A0A024R8S3 A0A024R8S3 SUMO2;SUMO4 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.3344 2 617.824952 1233.63535 79089.11 0.41673 0.00025746 0.25697 0.00015876 0.6737 0.00041623 617.825133439467 621.831946907139 50.201 0.16068 50.201 50.147 50.308 0 49 16 4 0 0 0 0.010366 1 28373 46.462 40.159 1 0.93717 0.94353 0 7161400 2854700 4306600 36160 256 13660 14035 56659 56659 VAGQDGSVVQFK 12 1 0 Unmodified _VAGQDGSVVQFK_ 0 0 0 A0A024R8S3;P61956;Q6EEV6 A0A024R8S3 A0A024R8S3 SUMO2;SUMO4 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.8252 2 617.824952 1233.63535 76945.45 0.47132 0.00029119 0.030626 1.8921E-05 0.50194 0.00031011 617.825049968796 621.832003770251 58.279 1.2926 58.279 57.844 59.136 -3.8147E-06 642 99 10 0 0 0 0.00019399 4 29496 77.533 71.498 1 1.7702 1.5009 0 60069000 21669000 38401000 36161 256 13660 14035 56660;56661;56662;56663 56661 VAGQDGSVVQFK 12 1 0 Unmodified _VAGQDGSVVQFK_ 0 0 0 A0A024R8S3;P61956;Q6EEV6 A0A024R8S3 A0A024R8S3 SUMO2;SUMO4 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.8325 2 617.824952 1233.63535 77040.1 0.40249 0.00024867 -0.080557 -4.977E-05 0.32193 0.0001989 617.824934111842 621.831967067295 58.771 1.7914 58.771 58.277 60.068 0 736 139 8 0 0 0 1.7249E-12 4 29477 126.55 112.41 1 1.7955 1.4965 0 40886000 14605000 26281000 36162 256 13660 14035 56664;56665;56666;56667 56666 VAGVVAPTLPR 11 0 1 Unmodified _VAGVVAPTLPR_ 0 0 0 A0A024RAV2;P46063 A0A024RAV2 A0A024RAV2 RECQL ATP-dependent DNA helicase Q1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.3328 2 540.332216 1078.64988 83424.7 0.76059 0.00041097 0.014049 7.5913E-06 0.77464 0.00041856 540.332029200591 545.336090091067 75.366 0.63295 75.366 75.13 75.763 0 241 53 6 0 0 0 0.00044003 2 44426 78.334 73.346 1 0.97352 0.99007 0 29632000 16683000 12948000 36163 314 13661 14036 56668;56669 56668 VAGVVAPTLPR 11 0 1 Unmodified _VAGVVAPTLPR_ 0 0 0 A0A024RAV2;P46063 A0A024RAV2 A0A024RAV2 RECQL ATP-dependent DNA helicase Q1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.3364 2 540.332216 1078.64988 84151.53 0.65177 0.00035217 0.098306 5.3118E-05 0.75007 0.00040529 540.331998921353 545.336286126913 74.238 0.69019 74.238 73.98 74.67 0 245 59 6 0 0 0 0.0014376 2 44613 67.507 67.507 1 1.0996 1.2026 0 30589000 16120000 14469000 36164 314 13661 14036 56670;56671 56670 VAGVVAPTLPR 11 0 1 Unmodified _VAGVVAPTLPR_ 0 0 0 A0A024RAV2;P46063 A0A024RAV2 A0A024RAV2 RECQL ATP-dependent DNA helicase Q1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.3328 2 540.332216 1078.64988 83795.97 0.54502 0.00029449 0.049992 2.7012E-05 0.59501 0.0003215 540.332178043542 545.336264742906 86.031 0.62662 86.031 85.723 86.349 0 130 43 4 0 0 0 0.018592 1 47132 44.719 42.032 1 0.76624 0.66362 0 1966500 1230900 735560 36165 314 13661 14036 56672 56672 VAGVVAPTLPR 11 0 1 Unmodified _VAGVVAPTLPR_ 0 0 0 A0A024RAV2;P46063 A0A024RAV2 A0A024RAV2 RECQL ATP-dependent DNA helicase Q1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.3326 2 540.332216 1078.64988 83519.72 0.56827 0.00030705 0.087151 4.7091E-05 0.65542 0.00035414 540.332138443926 545.336087531779 86.063 0.6187 86.063 85.792 86.411 0 111 33 5 0 0 0 0.0088595 1 46275 50.04 47.204 1 0.91748 0.79938 0 1806200 939750 866420 36166 314 13661 14036 56673 56673 VAHFLEK 7 1 0 Unmodified _VAHFLEK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.2467 2 422.239796 842.465038 92726.11 -0.021032 -8.8804E-06 -0.19828 -8.3722E-05 -0.21931 -9.2603E-05 422.239424281133 426.246752506435 25.574 0.49052 25.574 25.433 25.923 1.9073E-06 77 27 5 0 0 0 0.027367 1 11160 73.637 44.299 1 1.5245 1.6187 0 16111000 6178700 9931900 36167 1545 13662 14037 56674 56674 VAHFLEK 7 1 0 Unmodified _VAHFLEK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.2467 2 422.239796 842.465038 NaN NaN NaN 0.33504 0.00014147 NaN NaN NaN NaN 25 0.32811 25 24.857 25.185 0 0 0 0 0.03108 1 10664 69.176 36.705 1 NaN NaN 0 18707000 0 18707000 36168 1545 13662 14037 56675 56675 VAHSDKPGSTSTASFR 16 1 1 Unmodified _VAHSDKPGSTSTASFR_ 0 0 1 A8KA83;Q9P0L0 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.2755 3 549.941026 1646.80125 NaN NaN NaN 0.098003 5.3896E-05 NaN NaN NaN NaN 18.705 0.1381 18.705 18.645 18.784 0 0 0 0 0.00014178 2 5614 74.296 64.547 1 NaN NaN 0 2297600 2297600 0 36169 791 13663 14038 56676;56677 56677 VAHSDKPGSTSTASFR 16 1 1 Unmodified _VAHSDKPGSTSTASFR_ 0 0 1 A8KA83;Q9P0L0 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.9488 3 549.941026 1646.80125 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.69 1 18.69 18.19 19.19 0 0 0 0 0.015992 1 5594 41.412 29.939 1 36170 791 13663 14038 56678 56678 VAHSDKPGSTSTASFR 16 1 1 Unmodified _VAHSDKPGSTSTASFR_ 0 0 1 A8KA83;Q9P0L0 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 833.4199 2 824.4079 1646.80125 74201.57 0.51182 0.00042195 -0.093877 -7.7393E-05 0.41794 0.00034456 824.408047004619 833.419218707072 18.3 0.096985 18.3 18.249 18.346 0 11 3 5 0 0 0 4.9394E-06 1 5044 97.214 97.214 1 2.4717 2.7336 0 2441400 667050 1774400 36171 791 13663 14038 56679 56679 VAHSDKPGSTSTASFR 16 1 1 Unmodified _VAHSDKPGSTSTASFR_ 0 0 1 A8KA83;Q9P0L0 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 555.9485 3 549.941026 1646.80125 NaN NaN NaN 0.15805 8.6921E-05 NaN NaN NaN NaN 19.295 0.21613 19.295 19.21 19.426 0 0 0 0 0.016793 1 4615 42.095 38.191 1 NaN NaN 0 1338000 0 1338000 36172 791 13663 14038 56680 56680 VAIAENLLDVIK 12 1 0 Unmodified _VAIAENLLDVIK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.3907 2 649.389928 1296.7653 75300.59 0.92713 0.00060207 0.041871 2.719E-05 0.969 0.00062926 649.389916209303 653.396984148902 120.5 0.62351 120.5 120.22 120.85 0 268 44 8 0 0 0 4.8395E-08 2 77576 114.5 92.157 1 1.2345 1.3868 0 68991000 29422000 39569000 36173 1945 13664 14039 56681;56682 56681 VAIAENLLDVIK 12 1 0 Unmodified _VAIAENLLDVIK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3976 2 649.389928 1296.7653 75521.86 1.0938 0.00071033 -0.17233 -0.00011191 0.9215 0.00059842 649.389749950604 653.396875298558 119.98 0.73851 119.98 119.7 120.44 7.6294E-06 283 53 8 0 0 0 3.5535E-06 2 79173 111.06 71.209 1 1.2535 1.4005 0 89965000 40382000 49583000 36174 1945 13664 14039 56683;56684 56684 VAIAENLLDVIK 12 1 0 Unmodified _VAIAENLLDVIK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.398 2 649.389928 1296.7653 75277.52 1.136 0.00073772 -0.13462 -8.7422E-05 1.0014 0.0006503 649.389810658301 653.396835404223 133.07 0.82953 133.07 132.84 133.67 0 202 37 8 0 0 0 6.1603E-05 2 80926 98.04 83.954 1 2.0941 1.7065 0 31822000 10457000 21365000 36175 1945 13664 14039 56685;56686 56685 VAIAENLLDVIK 12 1 0 Unmodified _VAIAENLLDVIK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.3914 2 649.389928 1296.7653 76361.94 1.1995 0.00077895 -0.041434 -2.6907E-05 1.1581 0.00075204 649.389919547699 653.396926876416 132.8 0.60854 132.8 132.56 133.17 0 152 27 9 0 0 0 2.7248E-08 2 79853 119.22 94.403 1 2.2109 1.8418 0 40325000 13025000 27299000 36176 1945 13664 14039 56687;56688 56688 VAIFTLINEINK 12 1 0 Unmodified _VAIFTLINEINK_ 0 0 0 H0Y612;A0A024R0F6;Q9UPN9 H0Y612 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.9111 2 687.903202 1373.79185 77138.5 1.0208 0.00070222 -0.20579 -0.00014156 0.81502 0.00056066 687.902771722646 691.910281095339 123.17 0.4334 123.17 122.96 123.39 0 92 35 4 0 0 0 0.02594 1 79864 36.585 27.153 1 1.1165 1.1891 0 3667900 1525000 2143000 36177 45 13665 14040 56689 56689 VAIHEAMEQQTISIAK 16 1 0 Oxidation (M) _VAIHEAM(ox)EQQTISIAK_ VAIHEAM(1)EQQTISIAK VAIHEAM(69.88)EQQTISIAK 0 1 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B3KVF0;Q59F49 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.6457 3 595.645221 1783.91383 79650.74 0.672 0.00040027 -0.30618 -0.00018237 0.36582 0.0002179 595.979399551829 598.316163937262 49.638 0.35607 49.638 49.438 49.794 -3.8147E-06 95 27 6 0 0 0 3.9076E-05 1 27989 69.878 69.878 1 2.2461 2.2783 0 29614000 8476000 21138000 36178 745 13666 14041 56690 56690 581 VAIHYINPPNPAK 13 1 0 Unmodified _VAIHYINPPNPAK_ 0 0 0 Q5J8M4;P78406;E9PQ57 Q5J8M4 Q5J8M4 RAE1 mRNA export factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.273 3 478.601504 1432.78268 88022.36 0.02582 1.2357E-05 0.64249 0.0003075 0.66831 0.00031986 478.601645898109 481.273171068793 57.307 0.83266 57.307 56.931 57.764 0 238 64 6 0 0 0 0.0029957 1 33098 42.475 33.187 1 2.4454 2.5438 0 18987000 5166400 13820000 36179 1664 13667 14042 56691 56691 VAILVDDMADTCGTICHAADK 21 1 0 Oxidation (M) _VAILVDDM(ox)ADTCGTICHAADK_ VAILVDDM(1)ADTCGTICHAADK VAILVDDM(72.09)ADTCGTICHAADK 0 1 0 Q53FW2;P60891;B1ALA9;B7ZB02;A0A140VK41;P11908;B2R860 Q53FW2;A0A140VK41 Q53FW2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 767.3519 3 764.681677 2291.0232 NaN NaN NaN -0.49886 -0.00038147 NaN NaN NaN NaN 73.855 0.37604 73.855 73.632 74.008 0 0 0 0 2.4663E-08 1 43319 72.09 64.136 1 NaN NaN 0 5690200 0 5690200 36180 1626;616 13668 14043 56692 56692 465 VAISNPPQR 9 0 1 Unmodified _VAISNPPQR_ 0 0 0 Q15020;B4DYA2;H0YHU8 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.2816 2 491.277441 980.540328 NaN NaN NaN -2.8691 -0.0014095 NaN NaN NaN NaN 25.131 0.33669 25.131 24.994 25.33 0 0 0 0 0.043578 1 10808 49.097 25.788 1 NaN NaN 0 4738000 0 4738000 36181 1748 13669 14044 56693 56693 VALAGLLGFGLGK 13 1 0 Unmodified _VALAGLLGFGLGK_ 0 0 0 Q56VL3 Q56VL3 Q56VL3 OCIAD2 OCIA domain-containing protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.3771 2 608.376623 1214.73869 NaN NaN NaN -0.091135 -5.5444E-05 NaN NaN NaN NaN 126.49 0.19707 126.49 126.45 126.64 -7.6294E-06 0 0 0 0.0060073 1 82343 55.567 32.786 1 NaN NaN 0 858560 858560 0 36182 1797 13670 14045 56694 56694 VALAGLLGFGLGK 13 1 0 Unmodified _VALAGLLGFGLGK_ 0 0 0 Q56VL3 Q56VL3 Q56VL3 OCIAD2 OCIA domain-containing protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 608.3773 2 608.376623 1214.73869 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126 1 126 125.5 126.5 0 0 0 0 0.00021871 1 83990 90.629 50.584 1 36183 1797 13670 14045 56695 56695 VALEFGSEEPR 11 0 1 Unmodified _VALEFGSEEPR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.3138 2 617.309135 1232.60372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.874 1 69.874 69.374 70.374 0 0 0 0 7.2472E-13 1 40639 121.73 67.576 1 36184 44 13671 14046 56696 56696 VALEFGSEEPR 11 0 1 Unmodified _VALEFGSEEPR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.3093 2 617.309135 1232.60372 74822.69 0.16652 0.00010279 0.40356 0.00024912 0.57008 0.00035192 617.309355473898 622.313235289017 68.681 0.6069 68.681 68.275 68.882 0 181 50 7 0 0 0 7.8316E-06 2 40818 109.66 96.544 1 0.73747 0.84862 0 74731000 39866000 34865000 36185 44 13671 14046 56697;56698 56698 VALEFGSEEPR 11 0 1 Unmodified _VALEFGSEEPR_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.3135 2 617.309135 1232.60372 73372.37 0.42984 0.00026534 0.91495 0.0005648 1.3448 0.00083015 617.309072268579 622.313236877742 80.332 0.90514 80.332 79.883 80.788 7.6294E-06 233 57 8 0 0 0 0.0004662 2 42437 76.282 52.293 1 1.3672 1.1226 0 8707300 3733200 4974100 36186 44 13671 14046 56699;56700 56699 VALELPASK 9 1 0 Unmodified _VALELPASK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.2864 2 464.279118 926.543683 90312.16 0.091781 4.2612E-05 0.093469 4.3396E-05 0.18525 8.6008E-05 464.278839383406 468.286349156472 66.824 0.55693 66.824 66.636 67.193 0 141 40 4 0 0 0 0.005479 1 38532 66.621 41.699 1 1.1126 1.1631 0 12118000 5375500 6742300 36187 1392 13672 14047 56701 56701 VALELPASK 9 1 0 Unmodified _VALELPASK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 468.2864 2 464.279118 926.543683 NaN NaN NaN 0.21108 9.7999E-05 NaN NaN NaN NaN 76.78 0.47958 76.78 76.576 77.055 0 0 0 0 0.046103 1 40191 48.283 22.546 1 NaN NaN 0 1134100 0 1134100 36188 1392 13672 14047 56702 56702 VALGHGLK 8 1 0 Unmodified _VALGHGLK_ 0 0 0 A0A024R4Z6;Q08945;Q59GH7 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 397.7481 2 397.747788 793.481023 94340.19 -0.25282 -0.00010056 0.35366 0.00014067 0.10084 4.0107E-05 397.747859668719 401.754960898901 24.693 0.96113 24.693 24.508 25.469 0 133 46 8 0 0 0 0.0080518 2 10358 80.294 18.514 1 0.72515 0.85509 0 340290000 196690000 143600000 36189 167 13673 14048 56703;56704 56704 VALGHGLK 8 1 0 Unmodified _VALGHGLK_ 0 0 0 A0A024R4Z6;Q08945;Q59GH7 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 401.7545 2 397.747788 793.481023 94712.34 -0.11813 -4.6985E-05 -0.24284 -9.6589E-05 -0.36097 -0.00014357 397.747661211063 401.754678196274 24.148 0.76974 24.148 23.987 24.756 1.9073E-06 133 34 9 0 0 0 0.010089 2 9933 73.039 18.514 1 0.69257 0.81044 0 300220000 167440000 132780000 36190 167 13673 14048 56705;56706 56706 VALGHGLK 8 1 0 Unmodified _VALGHGLK_ 0 0 0 A0A024R4Z6;Q08945;Q59GH7 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 397.7483 2 397.747788 793.481023 93378.72 0.06928 2.7556E-05 0.37078 0.00014748 0.44006 0.00017503 397.747839401463 401.754973363995 26.704 0.96012 26.704 26.463 27.423 0 164 47 8 0 0 0 0.0092066 1 10132 75.311 20.785 1 1.0024 0.81861 0 33430000 16528000 16901000 36191 167 13673 14048 56707 56707 VALGHGLK 8 1 0 Unmodified _VALGHGLK_ 0 0 0 A0A024R4Z6;Q08945;Q59GH7 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 397.7475 2 397.747788 793.481023 94851.65 -0.21756 -8.6534E-05 0.84076 0.00033441 0.6232 0.00024788 397.748017366777 401.755137085022 26.559 1.0223 26.559 26.347 27.369 1.9073E-06 182 46 8 0 0 0 0.017572 1 9504 60.358 17.292 1 0.93127 0.76247 0 26919000 14359000 12560000 36192 167 13673 14048 56708 56708 VALGNTWK 8 1 0 Unmodified _VALGNTWK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.7574 2 444.750527 887.486502 92374.58 0.12297 5.469E-05 -0.07096 -3.156E-05 0.052009 2.3131E-05 444.750460215327 448.757514837298 49.111 0.89918 49.111 48.598 49.497 0 305 65 7 0 0 0 0.0019889 1 26744 103.91 63.334 1 0.78614 0.88857 0 143690000 88162000 55529000 36193 69 13674 14049 56709 56709 VALGNTWK 8 1 0 Unmodified _VALGNTWK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.7574 2 444.750527 887.486502 91390.31 0.084583 3.7618E-05 -0.093756 -4.1698E-05 -0.0091733 -4.0798E-06 444.750510806986 448.757435698566 56.114 1.1924 56.114 55.729 56.922 -3.8147E-06 325 76 8 0 0 0 0.0091183 1 28149 75.692 55.137 1 1.7566 1.4164 0 22384000 8417200 13966000 36194 69 13674 14049 56710 56710 VALGNTWK 8 1 0 Unmodified _VALGNTWK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27;A0A0C4DGE5 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 448.7575 2 444.750527 887.486502 90431.35 0.12885 5.7307E-05 0.24714 0.00010992 0.376 0.00016722 444.750570686261 448.757637721048 56.413 1.0829 56.413 56.069 57.151 3.8147E-06 322 75 8 0 0 0 0.009998 1 27732 73.248 34.03 1 1.7088 1.3675 0 21263000 7762100 13501000 36195 69 13674 14049 56711 56711 VALIGFPSVGK 11 1 0 Unmodified _VALIGFPSVGK_ 0 0 0 A8MZF9;P55039;J3QL90;J3KRL5;B4DIG2;J3QR71;J3QKV7;J3QRI9;J3QKW7 A8MZF9 A8MZF9 DRG2 Developmentally-regulated GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3297 2 544.329142 1086.64373 85229.67 0.75972 0.00041354 -0.41171 -0.00022411 0.348 0.00018943 544.329044082809 548.335682016987 103.68 0.55103 103.68 103.44 103.99 0 130 43 4 0 0 0 0.001998 2 63983 63.216 52.802 1 2.0853 2.0952 0 7410800 2307800 5103000 36196 801 13675 14050 56712;56713 56713 VALIGFPSVGK 11 1 0 Unmodified _VALIGFPSVGK_ 0 0 0 A8MZF9;P55039;J3QL90;J3KRL5;B4DIG2;J3QR71;J3QKV7;J3QRI9;J3QKW7 A8MZF9 A8MZF9 DRG2 Developmentally-regulated GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.3362 2 544.329142 1086.64373 84414.18 0.69085 0.00037605 -0.10828 -5.894E-05 0.58257 0.00031711 544.329122788371 548.336027400585 102.86 0.44275 102.86 102.7 103.14 -7.6294E-06 112 34 4 0 0 0 0.0068025 2 64896 53.751 35.716 1 1.9621 1.9915 0 12824000 4182900 8641500 36197 801 13675 14050 56714;56715 56714 VALLDVFR 8 0 1 Unmodified _VALLDVFR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3 DNA helicase;DNA replication licensing factor MCM3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7816 2 466.781828 931.549102 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.89 1 110.89 110.39 111.39 -7.6294E-06 0 0 0 0.046812 1 71462 55.676 20.571 1 36198 568 13676 14051 56716 56716 VALSEPQPER 10 0 1 Unmodified _VALSEPQPER_ 0 0 0 Q9BXP5;H7C3A1;H7C1K0 Q9BXP5 Q9BXP5 SRRT Serrate RNA effector molecule homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.298 2 563.29857 1124.58259 NaN NaN NaN -0.59633 -0.00033591 NaN NaN NaN NaN 36.371 0.27299 36.371 36.218 36.491 0 0 0 0 0.051194 1 18621 46.462 14.528 1 NaN NaN 0 10961000 10961000 0 36199 2013 13677 14052 56717 56717 VALSEPQPERR 11 0 2 Unmodified _VALSEPQPERR_ 0 0 1 Q9BXP5;H7C3A1;H7C1K0 Q9BXP5 Q9BXP5 SRRT Serrate RNA effector molecule homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.5748 3 427.901843 1280.6837 91877.34 -0.34969 -0.00014963 0.14131 6.0468E-05 -0.20837 -8.9164E-05 427.901771966366 434.574105797424 26.296 0.32025 26.296 26.131 26.451 -1.9073E-06 70 17 5 0 0 0 0.0004537 1 11728 51.252 51.252 1 1.2788 1.3354 0 13434000 5226000 8208200 36200 2013 13678 14053 56718 56718 VALTGLTVAEYFR 13 0 1 Unmodified _VALTGLTVAEYFR_ 0 0 0 H0YH81;Q0QEN7;V9HW31;P06576;F8W0P7 H0YH81 H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3995 2 720.398284 1438.78202 73066.59 0.82678 0.00059561 1.0663 0.00076815 1.8931 0.0013638 720.398129894922 725.402795075872 117.62 0.49564 117.62 117.38 117.87 0 131 32 6 0 0 0 8.8807E-09 2 75269 116.23 116.23 1 1.2314 1.2951 0 11344000 4316900 7027500 36201 1292 13679 14054 56719;56720 56719 VALTGLTVAEYFR 13 0 1 Unmodified _VALTGLTVAEYFR_ 0 0 0 H0YH81;Q0QEN7;V9HW31;P06576;F8W0P7 H0YH81 H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.4029 2 720.398284 1438.78202 72960.05 0.76381 0.00055025 0.69441 0.00050025 1.4582 0.0010505 720.398148414371 725.402673839851 117.12 0.4352 117.12 116.85 117.28 0 111 25 6 0 0 0 5.4353E-20 2 76681 150.1 150.1 1 1.3889 1.5018 0 26940000 11285000 15655000 36202 1292 13679 14054 56721;56722 56722 VALTGLTVAEYFR 13 0 1 Unmodified _VALTGLTVAEYFR_ 0 0 0 H0YH81;Q0QEN7;V9HW31;P06576;F8W0P7 H0YH81 H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.3976 2 720.398284 1438.78202 72487.74 0.80656 0.00058104 -0.16882 -0.00012162 0.63773 0.00045942 720.398377261342 725.402886453887 129.82 0.53236 129.82 129.6 130.13 -1.5259E-05 83 24 6 0 0 0 0.010789 1 78533 41.283 41.283 1 0.54376 0.47209 0 2349200 1554600 794560 36203 1292 13679 14054 56723 56723 VALTLAR 7 0 1 Unmodified _VALTLAR_ 0 0 0 Q4KMR5;E9PH99;Q9Y4E5;D6RIA1 Q4KMR5 Q4KMR5 ZNF451 Zinc finger protein 451 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 377.2465 2 372.242338 742.470124 104004.7 -0.25101 -9.3437E-05 0.43105 0.00016045 0.18003 6.7016E-05 372.242432206177 377.246607637462 53.037 0.36407 53.037 52.824 53.189 0 81 28 5 0 0 0 0.033078 1 29616 64.523 21.062 1 0.96457 0.96956 0 15933000 8679200 7253900 36204 1236 13680 14055 56724 56724 VALTLAR 7 0 1 Unmodified _VALTLAR_ 0 0 0 Q4KMR5;E9PH99;Q9Y4E5;D6RIA1 Q4KMR5 Q4KMR5 ZNF451 Zinc finger protein 451 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 372.2423 2 372.242338 742.470124 105265.7 -0.046677 -1.7375E-05 -0.27403 -0.00010201 -0.32071 -0.00011938 372.242242354693 377.246274844757 51.659 0.32562 51.659 51.488 51.814 -3.8147E-06 88 27 5 0 0 0 0.030033 1 29305 69.383 14.619 1 0.9684 0.97861 0 9898500 5626400 4272100 36205 1236 13680 14055 56725 56725 VALVGPNGAGK 11 1 0 Unmodified _VALVGPNGAGK_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.7953 2 491.787641 981.56073 86743.55 0.21995 0.00010817 0.40838 0.00020084 0.62833 0.00030901 491.787647765258 495.795001343278 37.764 0.57125 37.764 37.504 38.075 0 122 47 4 0 0 0 0.0082908 1 19234 51.066 33.826 1 1.3983 1.4185 0 13409000 5186800 8222600 36206 455 13681 14056 56726 56726 VALVNDSLSDVTSTTSSR 18 0 1 Unmodified _VALVNDSLSDVTSTTSSR_ 0 0 0 Q7Z2W4;A8K9U6;Q05DV5 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.9741 2 926.468352 1850.92215 64810.68 0.86281 0.00079937 -0.081837 -7.5819E-05 0.78097 0.00072355 926.46852632018 931.472556968843 84.975 0.77781 84.975 84.702 85.48 0 244 63 6 0 0 0 8.6129E-12 2 50896 109.44 109.44 1 1.5797 1.6852 0 44122000 19257000 24865000 36207 1873 13682 14057 56727;56728 56727 VALVNDSLSDVTSTTSSR 18 0 1 Unmodified _VALVNDSLSDVTSTTSSR_ 0 0 0 Q7Z2W4;A8K9U6;Q05DV5 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 931.4741 2 926.468352 1850.92215 63417.14 0.67155 0.00062217 0.22903 0.00021219 0.90058 0.00083436 926.468589505762 931.472533359095 84.162 0.58923 84.162 83.864 84.453 0 236 48 7 0 0 0 1.006E-11 2 51517 110.92 107.7 1 1.3947 1.5318 0 40467000 16510000 23957000 36208 1873 13682 14057 56729;56730 56729 VALVNDSLSDVTSTTSSR 18 0 1 Unmodified _VALVNDSLSDVTSTTSSR_ 0 0 0 Q7Z2W4;A8K9U6;Q05DV5 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 931.4729 2 926.468352 1850.92215 62590.04 0.77212 0.00071535 -0.11651 -0.00010794 0.65561 0.0006074 926.468580357132 931.472467361952 97.41 0.57549 97.41 97.159 97.734 0 155 30 8 0 0 0 0.00069256 2 54774 41.996 41.996 1 1.0735 0.91679 0 5736000 2522100 3213900 36209 1873 13682 14057 56731;56732 56732 VALVNDSLSDVTSTTSSR 18 0 1 Unmodified _VALVNDSLSDVTSTTSSR_ 0 0 0 Q7Z2W4;A8K9U6;Q05DV5 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 931.4734 2 926.468352 1850.92215 63244.22 0.29559 0.00027386 -0.1213 -0.00011238 0.1743 0.00016148 926.468385653496 931.472271473692 97.317 0.57522 97.317 97.055 97.63 0 130 28 7 0 0 0 9.356E-06 1 54019 80.469 80.469 1 1.1125 0.92595 0 7200300 3436500 3763800 36210 1873 13682 14057 56733 56733 VANFSNMDEDDIELEPER 18 0 1 Oxidation (M) _VANFSNM(ox)DEDDIELEPER_ VANFSNM(1)DEDDIELEPER VANFSNM(70.62)DEDDIELEPER 0 1 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1075.4673 2 1069.96277 2137.91099 60738.44 0.11177 0.00011959 0.37463 0.00040084 0.4864 0.00052043 1070.4638508608 1075.4701798578 81.614 0.48865 81.614 81.346 81.835 0 154 42 6 0 0 0 1.1315E-05 5 48610 70.622 67.3 1 0.8284 0.86827 0 12361000 6423700 5937200 36211 1366 13683 14058 56734;56735;56736;56737;56738 56736 1034 VANFSNMDEDDIELEPER 18 0 1 Oxidation (M) _VANFSNM(ox)DEDDIELEPER_ VANFSNM(1)DEDDIELEPER VANFSNM(78.76)DEDDIELEPER 0 1 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1075.4698 2 1069.96277 2137.91099 60118.6 0.40236 0.00043051 0.24429 0.00026139 0.64665 0.00069189 1070.4640213125 1075.46937580385 80.74 0.48122 80.74 80.568 81.05 0 118 38 4 0 0 0 5.629E-06 4 49386 78.763 75.442 1 0.9489 0.93672 0 14909000 9426300 5482500 36212 1366 13683 14058 56739;56740;56741;56742 56741 1034 VANPSGNLTETYVQDR 16 0 1 Unmodified _VANPSGNLTETYVQDR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.9327 2 882.431572 1762.84859 64824.29 0.5236 0.00046204 0.346 0.00030532 0.8696 0.00076736 882.431353488135 887.435894328334 61.261 0.58264 61.261 60.991 61.574 0 249 54 6 0 0 0 0.0003471 1 36014 53.034 53.034 1 1.3106 1.4655 0 44689000 19923000 24766000 36213 1504 13684 14059 56743 56743 VANPSSDADGQSLK 14 1 0 Unmodified _VANPSSDADGQSLK_ 0 0 0 B9EGR5;Q8IWI9 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.3234 2 694.836245 1387.65794 74040.16 0.59849 0.00041585 -0.24947 -0.00017334 0.34902 0.00024251 694.835916290619 698.84287297242 25.002 0.1978 25.002 24.916 25.113 0 32 10 5 0 0 0 0.00024871 1 10649 62.408 62.408 1 0.52789 0.54602 0 11111000 6972300 4138400 36214 1121 13685 14060 56744 56744 VANPSSDADGQSLK 14 1 0 Unmodified _VANPSSDADGQSLK_ 0 0 0 B9EGR5;Q8IWI9 B9EGR5 B9EGR5 MGA MAX gene-associated protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 694.8342 2 694.836245 1387.65794 NaN NaN NaN -0.24523 -0.00017039 NaN NaN NaN NaN 24.872 0.2071 24.872 24.756 24.963 1.9073E-06 0 0 0 0.00015138 2 10574 87.184 68.09 1 NaN NaN 0 5612800 5612800 0 36215 1121 13685 14060 56745;56746 56746 VANTSSFHTTPNTSLGMVQATPSK 24 1 0 Oxidation (M) _VANTSSFHTTPNTSLGM(ox)VQATPSK_ VANTSSFHTTPNTSLGM(1)VQATPSK VANTSSFHTTPNTSLGM(55.23)VQATPSK 0 1 0 A0JLU2;B4DYG2;O43683;A8K5A6 A0JLU2 A0JLU2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.4129 3 831.40771 2491.2013 67574.28 0.48773 0.0004055 -0.15933 -0.00013247 0.3284 0.00027304 831.741830892651 834.413212416518 58.638 0.45726 58.638 58.347 58.804 -3.8147E-06 144 37 5 0 0 0 2.0748E-09 1 33231 55.228 55.228 1 1.1377 1.1795 0 11272000 4468000 6804300 36216 641 13686 14061 56747 56747 499 VANVPNTSLLVNIPQPTPASLK 22 1 0 Unmodified _VANVPNTSLLVNIPQPTPASLK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1137.646 2 1137.14682 2272.27908 58512.97 0.3952 0.0004494 0.007226 8.217E-06 0.40242 0.00045761 1137.64833084037 1141.65525793912 117.04 0.37326 117.04 116.84 117.21 0 158 27 8 0 0 0 4.2111E-11 2 74751 88.311 88.311 1 0.85415 0.84091 0 24105000 13050000 11055000 36217 229 13687 14062 56748;56749 56749 VANVPNTSLLVNIPQPTPASLK 22 1 0 Unmodified _VANVPNTSLLVNIPQPTPASLK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1137.6495 2 1137.14682 2272.27908 58771.28 0.1671 0.00019001 0.2802 0.00031862 0.44729 0.00050864 1137.6487008726 1141.65570293036 116.53 0.34143 116.53 116.37 116.72 0 136 21 8 0 0 0 4.0009E-07 2 76214 56.599 56.599 1 0.79987 0.81078 0 29436000 15794000 13642000 36218 229 13687 14062 56750;56751 56751 VANVPNTSLLVNIPQPTPASLK 22 1 0 Unmodified _VANVPNTSLLVNIPQPTPASLK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1137.6499 2 1137.14682 2272.27908 57440.76 0.18284 0.00020792 0.57202 0.00065047 0.75486 0.00085838 1137.64832520948 1141.65549527487 129.17 0.45485 129.17 128.93 129.38 0 190 21 12 0 0 0 7.0009E-07 2 78082 51.265 51.265 1 2.1249 1.6717 0 17335000 5326700 12008000 36219 229 13687 14062 56752;56753 56753 VANVPNTSLLVNIPQPTPASLK 22 1 0 Unmodified _VANVPNTSLLVNIPQPTPASLK_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1137.1471 2 1137.14682 2272.27908 57784.76 0.43032 0.00048933 0.44699 0.00050829 0.8773 0.00099762 1137.64849078506 1141.65537807424 128.99 0.53561 128.99 128.72 129.25 0 152 20 10 0 0 0 5.0329E-05 1 77051 41.378 41.378 1 2.1796 1.7515 0 16578000 4876100 11702000 36220 229 13687 14062 56754 56754 VANVSAAEDSVSQR 14 0 1 Unmodified _VANVSAAEDSVSQR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.86 2 716.854969 1431.69539 NaN NaN NaN -0.26271 -0.00018832 NaN NaN NaN NaN 35.398 0.50217 35.398 35.11 35.612 0 0 0 0 2.0173E-31 1 17663 151.26 127.94 1 NaN NaN 0 29341000 0 29341000 36221 2081 13688 14063 56755 56755 VANVSAAEDSVSQR 14 0 1 Unmodified _VANVSAAEDSVSQR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.8629 2 716.854969 1431.69539 72480.8 0.90032 0.0006454 0.49316 0.00035353 1.3935 0.00099892 716.855047908116 721.859148954353 34.732 0.5429 34.732 34.409 34.952 -3.8147E-06 234 46 8 0 0 0 2.6716E-14 2 17486 129.34 112.63 1 0.95387 1.0873 0 100830000 52463000 48369000 36222 2081 13688 14063 56756;56757 56756 VANVSAAEDSVSQR 14 0 1 Unmodified _VANVSAAEDSVSQR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.8594 2 716.854969 1431.69539 70942.88 0.56158 0.00040257 0.23492 0.0001684 0.79651 0.00057098 716.85513546478 721.859141202327 41.236 0.60413 41.236 40.954 41.558 0 269 46 8 0 0 0 0.00011412 4 19030 82.85 75.722 1 1.2238 1.0214 0 23292000 11125000 12167000 36223 2081 13688 14063 56758;56759;56760;56761 56758 VANVSAAEDSVSQR 14 0 1 Unmodified _VANVSAAEDSVSQR_ 0 0 0 Q9NY93;Q53HB9;H7C3E9;G3V0G3;F8WDT8 Q9NY93 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 716.8558 2 716.854969 1431.69539 71148.92 0.37627 0.00026973 0.45475 0.00032599 0.83102 0.00059572 716.855246509641 721.859263439737 41.589 0.67198 41.589 41.331 42.002 0 299 49 9 0 0 0 0.00011216 3 18725 83.182 73.495 1 1.2168 1.0427 0 20947000 8684600 12262000 36224 2081 13688 14063 56762;56763;56764 56763 VANVSLLALYK 11 1 0 Unmodified _VANVSLLALYK_ 0 0 0 A8K517;P62266 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8685 2 595.860806 1189.70706 78528.84 0.62328 0.00037139 -0.2712 -0.0001616 0.35208 0.00020979 595.861571102459 599.867641328 103.95 2.9366 103.95 103.46 106.4 0 1359 230 12 0 0 0 7.7243E-10 7 64548 125.82 116.46 1 0.77781 0.94473 0 2296600000 1281700000 1014900000 36225 744 13689 14064 56765;56766;56767;56768;56769;56770;56771 56768 VANVSLLALYK 11 1 0 Unmodified _VANVSLLALYK_ 0 0 0 A8K517;P62266 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1190.7129 1 1190.71434 1189.70706 55924.74 -0.013636 -1.6237E-05 0.26859 0.00031982 0.25496 0.00030358 1190.7145408111 1198.72878337865 103.95 0.967 103.95 103.59 104.56 -7.6294E-06 353 78 6 0 0 0 0.0097689 1 64559 57.59 42.923 1 0.80513 0.91012 0 84043000 45881000 38162000 36226 744 13689 14064 56772 56772 VANVSLLALYK 11 1 0 Unmodified _VANVSLLALYK_ 0 0 0 A8K517;P62266 A8K517 A8K517 RPS23 40S ribosomal protein S23 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8679 2 595.860806 1189.70706 NaN NaN NaN 0.60274 0.00035915 NaN NaN NaN NaN 106.12 0.5677 106.12 105.91 106.48 0 0 0 0 0.0025015 1 65917 73.985 56.599 1 NaN NaN 0 3118900 0 3118900 36227 744 13689 14064 56773 56773 VANVSLLALYK 11 1 0 Unmodified _VANVSLLALYK_ 0 0 0 A8K517;P62266 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8679 2 595.860806 1189.70706 78685.14 0.74319 0.00044284 -0.36211 -0.00021577 0.38108 0.00022707 595.861648366454 599.867588609375 103.11 2.7977 103.11 102.7 105.49 -7.6294E-06 1258 225 11 0 0 0 1.4688E-17 7 65571 161.92 153.99 1 0.78693 0.93383 0 4771800000 2664000000 2107800000 36228 744 13689 14064 56774;56775;56776;56777;56778;56779;56780 56777 VANVSLLALYK 11 1 0 Unmodified _VANVSLLALYK_ 0 0 0 A8K517;P62266 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.861 2 595.860806 1189.70706 80504.77 0.60449 0.00036019 0.19132 0.000114 0.79581 0.00047419 595.86061222162 599.867927038447 142.66 0.50603 142.66 142.38 142.89 0 146 52 4 0 0 0 0.027154 1 92088 40.352 37.239 1 0.75011 0.83061 0 1647800 988110 659690 36229 744 13689 14064 56781 56781 VANVSLLALYK 11 1 0 Unmodified _VANVSLLALYK_ 0 0 0 A8K517;P62266 A8K517 A8K517 RPS23 40S ribosomal protein S23 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8615 2 595.860806 1189.70706 NaN NaN NaN 0.32698 0.00019484 NaN NaN NaN NaN 106.17 0.2327 106.17 106.08 106.31 0 0 0 0 0.0079024 1 67619 61.78 36.329 1 NaN NaN 0 2537500 2537500 0 36230 744 13689 14064 56782 56782 VANVSLLALYK 11 1 0 Unmodified _VANVSLLALYK_ 0 0 0 A8K517;P62266 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8435 2 595.860806 1189.70706 81937.91 0.80669 0.00048068 -0.12685 -7.5584E-05 0.67984 0.00040509 595.860461367612 599.868048230246 105.88 0.58646 105.88 105.49 106.08 0 115 43 4 0 0 0 0.025466 1 67062 61.56 53.028 1 0.74542 0.75379 0 8840000 3892400 4947700 36231 744 13689 14064 56783 56783 VANVSLLALYK 11 1 0 Unmodified _VANVSLLALYK_ 0 0 0 A8K517;P62266 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.8693 2 595.860806 1189.70706 78056.41 0.79648 0.00047459 -0.47704 -0.00028425 0.31944 0.00019034 595.861875388267 599.867932616013 115.93 3.2803 115.93 115.67 118.95 7.6294E-06 784 143 11 0 0 0 2.0714E-12 8 67972 141.48 129.89 1 1.6088 1.4712 0 1288000000 471300000 816700000 36232 744 13689 14064 56784;56785;56786;56787;56788;56789;56790;56791 56784 VANVSLLALYK 11 1 0 Unmodified _VANVSLLALYK_ 0 0 0 A8K517;P62266 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 595.8616 2 595.860806 1189.70706 78667.43 0.84674 0.00050454 -0.43807 -0.00026103 0.40868 0.00024351 595.86179947146 599.867939473009 115.81 3.441 115.81 115.35 118.79 0 946 163 12 0 0 0 8.4595E-06 8 66884 109.42 100.24 1 1.6164 1.4343 0 1198500000 464670000 733840000 36233 744 13689 14064 56792;56793;56794;56795;56796;56797;56798;56799 56793 VAPAPAAADAEVEQTDAESK 20 1 0 Unmodified _VAPAPAAADAEVEQTDAESK_ 0 0 0 Q8NE02;O43823;Q9UG73 Q8NE02 Q8NE02 AKAP8;DKFZp586B1222 A-kinase anchor protein 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 989.4779 2 985.471091 1968.92763 NaN NaN NaN -0.58752 -0.00057899 NaN NaN NaN NaN 51.626 0.2222 51.626 51.477 51.699 0 0 0 0 0.00059251 1 28604 50.843 37.643 1 NaN NaN 0 6456400 0 6456400 36234 1390 13690 14065 56800 56800 VAPAPAAADAEVEQTDAESK 20 1 0 Unmodified _VAPAPAAADAEVEQTDAESK_ 0 0 0 Q8NE02;O43823;Q9UG73 Q8NE02 Q8NE02 AKAP8;DKFZp586B1222 A-kinase anchor protein 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 989.4795 2 985.471091 1968.92763 NaN NaN NaN 0.13578 0.00013381 NaN NaN NaN NaN 50.388 0.19138 50.388 50.298 50.49 -3.8147E-06 0 0 0 2.566E-07 1 28420 77.42 69.876 1 NaN NaN 0 9103800 0 9103800 36235 1390 13690 14065 56801 56801 VAPAPAVVK 9 1 0 Unmodified _VAPAPAVVK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.2717 2 426.271096 850.527639 92283.86 0.39424 0.00016805 -0.30466 -0.00012987 0.089583 3.8187E-05 426.270856636701 430.27795428703 33.246 1.2942 33.246 32.804 34.098 0 617 127 8 0 0 0 0.002027 2 16424 77.741 50.603 1 0.93887 1.1122 0 458610000 245980000 212640000 36236 1648 13691 14066 56802;56803 56803 VAPAPAVVK 9 1 0 Unmodified _VAPAPAVVK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.2706 2 426.271096 850.527639 92116.04 -0.048354 -2.0612E-05 -0.078142 -3.331E-05 -0.1265 -5.3922E-05 426.270938979088 430.278079349804 32.763 1.3294 32.763 32.275 33.604 0 681 120 8 0 0 0 0.013975 1 16168 56.091 35.392 1 0.93725 1.104 0 527130000 278100000 249030000 36237 1648 13691 14066 56804 56804 VAPAPAVVK 9 1 0 Unmodified _VAPAPAVVK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 426.2707 2 426.271096 850.527639 91666.18 -0.57273 -0.00024414 0.29376 0.00012522 -0.27897 -0.00011892 426.271176391767 430.278163042626 37.642 1.386 37.642 37.082 38.468 0 536 112 8 0 0 0 0.052646 1 16446 36.975 22.193 1 0.81046 0.68129 0 50520000 27187000 23333000 36238 1648 13691 14066 56805 56805 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 982.0443 2 977.53584 1953.05713 61103.89 0.57043 0.00055762 -0.32834 -0.00032096 0.2421 0.00023666 977.53587535528 981.541998365832 84.448 0.94852 84.448 84.162 85.111 0 429 76 8 0 0 0 8.9289E-08 2 50970 100.22 23.038 1 1.9544 2.267 0 241960000 79110000 162850000 36239 1624;1656;1796 13692 14067 56806;56807 56807 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.0327 3 652.026319 1953.05713 74316.13 1.1886 0.000775 0.11765 7.6713E-05 1.3063 0.00085171 652.361221529266 655.031906212783 145.27 0.24933 145.27 145.25 145.5 0 27 9 7 0 0 0 8.0532E-05 1 91341 34.498 0 1 5.1821 5.705 0 55133000 20464000 34669000 36240 1624;1656;1796 13692 14067 56808 56808 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.0336 3 652.026319 1953.05713 NaN NaN NaN -2.0254 -0.0013206 NaN NaN NaN NaN 84.411 2.4099 84.411 84.028 86.438 -7.6294E-06 0 0 0 4.6851E-10 2 50384 89.311 12.12 1 NaN NaN 0 4344300000 0 4344300000 36241 1624;1656;1796 13692 14067 56809;56810 56809 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.699 3 652.026319 1953.05713 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.962 1 86.962 86.462 87.462 -7.6294E-06 0 0 0 7.2936E-05 1 52461 72.819 8.3115 1 36242 1624;1656;1796 13692 14067 56811 56811 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 978.0381 2 977.53584 1953.05713 60970.59 0.31187 0.00030486 0.28448 0.00027809 0.59635 0.00058295 977.53616286157 982.044675316297 83.206 0.94198 83.206 82.951 83.892 0 459 73 10 0 0 0 4.5041E-22 2 50869 146.96 36.579 1 1.9745 2.308 0 286350000 94784000 191560000 36243 1624;1656;1796 13692 14067 56812;56813 56813 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.0325 3 652.026319 1953.05713 76749.48 -0.66723 -0.00043505 1.3175 0.00085905 0.65028 0.000424 652.361783311009 654.698893448692 145.26 0.32977 145.26 145.24 145.57 0 41 16 6 0 0 0 2.0903E-08 1 92767 72.819 8.3115 1 1.2328 1.3755 0 52367000 22051000 30316000 36244 1624;1656;1796 13692 14067 56814 56814 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.6981 3 652.026319 1953.05713 NaN NaN NaN -1.8771 -0.0012239 NaN NaN NaN NaN 83.237 1.2336 83.237 82.805 84.038 0 0 0 0 1.4211E-09 2 51306 81.692 10.098 1 NaN NaN 0 4776200000 0 4776200000 36245 1624;1656;1796 13692 14067 56815;56816 56816 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3623 3 652.026319 1953.05713 NaN NaN NaN 0.75908 0.00049494 NaN NaN NaN NaN 85.397 0.37179 85.397 85.063 85.435 0 0 0 0 0.0011146 1 52500 48.883 6.5016 1 NaN NaN 0 12101000 12101000 0 36246 1624;1656;1796 13692 14067 56817 56817 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.0269 3 652.026319 1953.05713 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.568 1 84.568 84.068 85.068 -7.6294E-06 0 0 0 0.0009654 1 51942 60.618 9.0829 1 36247 1624;1656;1796 13692 14067 56818 56818 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.697 3 652.026319 1953.05713 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.092 1 86.092 85.592 86.592 0 0 0 0 0.00054758 1 53080 65.105 4.7977 1 36248 1624;1656;1796 13692 14067 56819 56819 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 982.0449 2 977.53584 1953.05713 60814.09 0.41176 0.00040251 -0.2796 -0.00027332 0.13216 0.00012919 978.037132586734 982.044083180905 96.535 1.2015 96.535 96.185 97.387 -7.6294E-06 438 66 11 0 0 0 0.052358 1 54055 21.55 10.291 1 2.6118 2.1856 0 50791000 13929000 36862000 36249 1624;1656;1796 13692 14067 56820 56820 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.0324 3 652.026319 1953.05713 NaN NaN NaN -1.7359 -0.0011318 NaN NaN NaN NaN 96.462 3.6149 96.462 96.161 99.775 7.6294E-06 0 0 0 0.00020624 4 54533 55.864 7.8113 1 NaN NaN 0 723240000 0 723240000 36250 1624;1656;1796 13692 14067 56821;56822;56823;56824 56822 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6;P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;Q562L9 Q53GK6;P63261;Q562L9 P63261 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.6977 3 652.026319 1953.05713 NaN NaN NaN -1.2052 -0.00078581 NaN NaN NaN NaN 96.212 3.6366 96.212 95.843 99.48 0 0 0 0 5.9828E-05 5 53005 64.454 8.5898 1 NaN NaN 0 605140000 0 605140000 36251 1624;1656;1796 13692 14067 56825;56826;56827;56828;56829 56825 VAQDWLK 7 1 0 Unmodified _VAQDWLK_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1;B4DT20 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.2444 2 430.237253 858.459953 92323.55 0.017111 7.3617E-06 0.28694 0.00012345 0.30405 0.00013081 430.237187660934 434.244368012647 52.024 0.43587 52.024 51.741 52.177 3.8147E-06 144 34 6 0 0 0 0.030033 1 28817 69.383 24.41 1 0.75721 0.81377 0 39834000 21510000 18323000 36252 1774;1029;1128 13693 14068 56830 56830 VAQIQNAGLGEFR 13 0 1 Unmodified _VAQIQNAGLGEFR_ 0 0 0 Q9ULR0;D6RC18;A8MVI5 Q9ULR0 Q9ULR0 ISY1 Pre-mRNA-splicing factor ISY1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.8812 2 701.875508 1401.73646 NaN NaN NaN 0.15889 0.00011152 NaN NaN NaN NaN 75.313 0.49751 75.313 75.038 75.535 0 0 0 0 1.3219E-05 1 44319 96.015 56.993 1 NaN NaN 0 8454700 0 8454700 36253 2111 13694 14069 56831 56831 VAQLEQVYIR 10 0 1 Unmodified _VAQLEQVYIR_ 0 0 0 P62318 P62318 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.8451 2 609.845687 1217.67682 78299.91 0.43805 0.00026715 -0.53888 -0.00032864 -0.10083 -6.1491E-05 609.845208737011 614.849576048539 73.067 0.93683 73.067 72.707 73.644 0 315 82 5 0 0 0 8.3436E-09 3 42741 124.23 63.19 1 1.0906 1.1909 0 52044000 26158000 25885000 36254 1646 13695 14070 56832;56833;56834 56832 VAQLEQVYIR 10 0 1 Unmodified _VAQLEQVYIR_ 0 0 0 P62318 P62318 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 609.8455 2 609.845687 1217.67682 78372.08 0.30841 0.00018808 -0.47296 -0.00028844 -0.16455 -0.00010035 609.845337244184 614.849659361746 71.975 0.91013 71.975 71.478 72.388 0 319 78 6 0 0 0 3.3247E-08 3 43018 119.21 53.965 1 1.0838 1.2591 0 63565000 29991000 33574000 36255 1646 13695 14070 56835;56836;56837 56836 VAQLEQVYIR 10 0 1 Unmodified _VAQLEQVYIR_ 0 0 0 P62318 P62318 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.8495 2 609.845687 1217.67682 77614.17 0.35452 0.0002162 -0.39545 -0.00024116 -0.040927 -2.4959E-05 609.8453127433 614.849684955075 83.84 0.71076 83.84 83.583 84.294 0 228 58 6 0 0 0 3.5718E-05 1 45626 99.442 41.843 1 0.88931 0.76402 0 7984000 4379000 3605000 36256 1646 13695 14070 56838 56838 VAQLEQVYIR 10 0 1 Unmodified _VAQLEQVYIR_ 0 0 0 P62318 P62318 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.8502 2 609.845687 1217.67682 78457.77 0.64164 0.0003913 -0.32747 -0.00019971 0.31416 0.00019159 609.845252407393 614.849740248529 83.956 0.80147 83.956 83.676 84.478 0 261 63 6 0 0 0 0.0010607 1 44900 76.827 17.582 1 0.84388 0.70404 0 6552900 3523300 3029600 36257 1646 13695 14070 56839 56839 VAQNLVGPDNVHVALSLVEYKPELQK 26 2 0 Unmodified _VAQNLVGPDNVHVALSLVEYKPELQK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 716.1458 4 715.894637 2859.54944 70797.8 0.9594 0.00068683 -0.088914 -6.3653E-05 0.87048 0.00062317 716.145388325928 720.152473752457 111.07 0.86076 111.07 110.67 111.53 0 382 57 11 0 0 0 4.0193E-46 3 69837 139.79 139.79 1 0.75005 0.88488 0 215510000 123960000 91552000 36258 69 13696 14071 56840;56841;56842 56842 VAQNLVGPDNVHVALSLVEYKPELQK 26 2 0 Unmodified _VAQNLVGPDNVHVALSLVEYKPELQK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.1992 3 954.190424 2859.54944 64307.88 0.81918 0.00078165 -1.3476 -0.0012858 -0.52838 -0.00050417 954.856844354337 959.86588478242 111.06 0.44688 111.06 110.76 111.21 0 90 29 5 0 0 0 0.00036622 3 69773 33.649 33.649 1 0.62542 0.73845 0 40380000 21104000 19276000 36259 69 13696 14071 56843;56844;56845 56845 VAQNLVGPDNVHVALSLVEYKPELQK 26 2 0 Unmodified _VAQNLVGPDNVHVALSLVEYKPELQK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 716.1459 4 715.894637 2859.54944 71173.89 0.8105 0.00058023 -0.041263 -2.954E-05 0.76924 0.00055069 716.145407330856 720.152410567679 110.16 0.8828 110.16 109.78 110.66 7.6294E-06 502 59 12 0 0 0 4.9493E-28 2 70769 113.23 113.23 1 0.75806 0.88216 0 178990000 95201000 83794000 36260 69 13696 14071 56846;56847 56847 VAQNLVGPDNVHVALSLVEYKPELQK 26 2 0 Unmodified _VAQNLVGPDNVHVALSLVEYKPELQK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 716.1457 4 715.894637 2859.54944 70794.69 0.93596 0.00067005 -0.39619 -0.00028363 0.53977 0.00038642 716.14524501943 720.152138216124 121.34 0.7361 121.34 121.01 121.74 0 248 35 14 0 0 0 4.0177E-28 2 72114 115.5 115.5 1 1.6677 1.4017 0 316880000 118160000 198710000 36261 69 13696 14071 56848;56849 56848 VAQNLVGPDNVHVALSLVEYKPELQK 26 2 0 Unmodified _VAQNLVGPDNVHVALSLVEYKPELQK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 954.5249 3 954.190424 2859.54944 61319.21 0.54635 0.00052132 -0.11259 -0.00010743 0.43376 0.00041389 954.524726604341 959.867448985983 121.34 0.3987 121.34 121.12 121.52 0 121 17 11 0 0 0 0.033566 1 72150 17.65 17.65 1 1.8859 1.6034 0 34358000 11585000 22773000 36262 69 13696 14071 56850 56850 VAQNLVGPDNVHVALSLVEYKPELQK 26 2 0 Unmodified _VAQNLVGPDNVHVALSLVEYKPELQK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 716.1463 4 715.894637 2859.54944 70938.64 0.82836 0.00059302 -0.073696 -5.2758E-05 0.75467 0.00054026 716.145599748314 720.152416051092 121.09 0.60442 121.09 120.85 121.45 7.6294E-06 265 30 15 0 0 0 1.0071E-16 2 71049 91.114 91.114 1 1.5677 1.3461 0 170470000 60987000 109480000 36263 69 13696 14071 56851;56852 56851 VAQNLVGPDNVHVALSLVEYKPELQK 26 2 0 Unmodified _VAQNLVGPDNVHVALSLVEYKPELQK_ 0 0 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 959.8681 3 954.190424 2859.54944 61667.53 0.46058 0.00043948 0.37566 0.00035845 0.83624 0.00079793 954.525155697529 959.867842647447 121.11 0.44383 121.11 120.95 121.39 -7.6294E-06 134 21 11 0 0 0 2.0516E-12 2 71073 66.52 66.52 1 1.8684 1.5942 0 57896000 19739000 38157000 36264 69 13696 14071 56853;56854 56853 VAQPETPVTLQFQGSK 16 1 0 Unmodified _VAQPETPVTLQFQGSK_ 0 0 0 Q96L91;A7E2D7 Q96L91 Q96L91 EP400 E1A-binding protein p400 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 865.4622 2 865.459601 1728.90465 68941.41 0.94368 0.00081672 -0.40745 -0.00035263 0.53624 0.00046409 865.960779847791 869.968033080105 82.696 0.36476 82.696 82.518 82.883 0 79 29 4 0 0 0 0.0010435 1 49511 46.88 46.88 1 0.57559 0.58398 0 6570100 4206800 2363300 36265 1977 13697 14072 56855 56855 VAQPETPVTLQFQGSK 16 1 0 Unmodified _VAQPETPVTLQFQGSK_ 0 0 0 Q96L91;A7E2D7 Q96L91 Q96L91 EP400 E1A-binding protein p400 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.4594 2 865.459601 1728.90465 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.668 1 81.668 81.168 82.168 0 0 0 0 0.0084135 1 49919 47.712 34.512 1 36266 1977 13697 14072 56856 56856 VAQPETPVTLQFQGSK 16 1 0 Unmodified _VAQPETPVTLQFQGSK_ 0 0 0 Q96L91;A7E2D7 Q96L91 Q96L91 EP400 E1A-binding protein p400 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.4606 2 865.459601 1728.90465 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.719 1 81.719 81.219 82.219 7.6294E-06 0 0 0 0.0093044 1 49956 46.592 31.902 1 36267 1977 13697 14072 56857 56857 VAQPETPVTLQFQGSK 16 1 0 Unmodified _VAQPETPVTLQFQGSK_ 0 0 0 Q96L91;A7E2D7 Q96L91 Q96L91 EP400 E1A-binding protein p400 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 865.4586 2 865.459601 1728.90465 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.828 1 81.828 81.328 82.328 0 0 0 0 0.005129 1 50026 51.841 34.032 1 36268 1977 13697 14072 56858 56858 VAQPTITDNK 10 1 0 Unmodified _VAQPTITDNK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5F3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.8019 2 543.793121 1085.57169 82597.29 0.8222 0.00044711 0.74721 0.00040633 1.5694 0.00085344 543.793459734049 547.800581808506 26.029 0.29677 26.029 25.864 26.16 0 46 14 5 0 0 0 1.874E-08 2 11532 122.13 77.053 1 1.504 1.4753 0 22724000 9812400 12911000 36269 1504 13698 14073 56859;56860 56859 VAQPTITDNK 10 1 0 Unmodified _VAQPTITDNK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5F3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.8026 2 543.793121 1085.57169 82655.81 0.54629 0.00029707 0.33112 0.00018006 0.87741 0.00047713 543.792966081366 547.800821305376 25.709 0.37648 25.709 25.517 25.893 0 93 24 5 0 0 0 5.0672E-08 1 11261 115.7 61.866 1 1.2475 1.3493 0 21990000 9478800 12511000 36270 1504 13698 14073 56861 56861 VAQREEELEETGNQHNDVEIEEAGEEEEK 29 1 1 Unmodified _VAQREEELEETGNQHNDVEIEEAGEEEEK_ 0 0 1 Q9H307;A8K964;B4DTD4;B4E392 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 847.8838 4 843.126379 3368.47641 66746.73 0.94998 0.00080095 0.048562 4.0944E-05 0.99854 0.0008419 843.376724746906 847.883207677093 48.558 0.2616 48.558 48.406 48.667 0 46 17 6 0 0 0 0.013495 2 27223 18.965 18.965 1 1.9193 2.1625 0 14053000 4728700 9324400 36271 2028 13699 14074 56862;56863 56863 VAQVLEGFITR 11 0 1 Unmodified _VAQVLEGFITR_ 0 0 0 Q59E91;Q4G0F4;O00411 Q59E91 Q59E91 POLRMT DNA-directed RNA polymerase;DNA-directed RNA polymerase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.3599 2 616.853512 1231.69247 80820.2 0.88038 0.00054307 0.37274 0.00022993 1.2531 0.00077299 616.854073761771 622.359439940961 98.702 0.88038 98.702 98.213 99.093 0 187 71 5 0 0 0 0.011605 1 60389 48.284 23.508 1 4.7336 4.9599 0 12444000 3285900 9157700 36272 1363 13700 14075 56864 56864 VAQVLEGFITR 11 0 1 Unmodified _VAQVLEGFITR_ 0 0 0 Q59E91;Q4G0F4;O00411 Q59E91 Q59E91 POLRMT DNA-directed RNA polymerase;DNA-directed RNA polymerase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.8582 2 616.853512 1231.69247 81920.58 0.42994 0.00026521 -1.0124 -0.00062449 -0.58243 -0.00035927 616.853992856932 622.357510563035 97.945 0.7233 97.945 97.637 98.36 -7.6294E-06 163 61 5 0 0 0 0.0016272 2 61252 66.056 32.793 1 1.6969 1.6884 0 7825000 3505200 4319800 36273 1363 13700 14075 56865;56866 56865 VAQYVVR 7 0 1 Unmodified _VAQYVVR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4;K7EPV1;K7ESA5;Q12873;B4DLC6 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 417.7455 2 417.745245 833.475937 93463.24 0.42468 0.00017741 0.08938 3.7338E-05 0.51406 0.00021475 417.745199410099 422.74931678573 29.41 0.39638 29.41 29.218 29.614 1.9073E-06 130 31 6 0 0 0 0.01007 2 14204 118.42 49.032 1 0.65895 0.73347 0 78816000 45543000 33274000 36274 515;1701 13701 14076 56867;56868 56867 VAQYVVR 7 0 1 Unmodified _VAQYVVR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4;K7EPV1;K7ESA5;Q12873;B4DLC6 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.7448 2 417.745245 833.475937 95720.6 -0.21719 -9.0731E-05 0.37236 0.00015555 0.15517 6.4822E-05 417.745242758469 422.749537632557 28.983 0.42233 28.983 28.749 29.171 0 137 34 6 0 0 0 0.0053001 1 13821 132.01 62.615 1 0.69706 0.7796 0 44727000 26293000 18434000 36275 515;1701 13701 14076 56869 56869 VAQYVVR 7 0 1 Unmodified _VAQYVVR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4;K7EPV1;K7ESA5;Q12873;B4DLC6 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 417.7453 2 417.745245 833.475937 94133.42 -0.33129 -0.0001384 0.21253 8.8784E-05 -0.11876 -4.9613E-05 417.745073600979 422.749361191062 33.286 0.31659 33.286 33.118 33.435 0 96 28 5 0 0 0 0.026743 2 14556 82.263 17 1 1.994 1.7067 0 8676500 2675000 6001500 36276 515;1701 13701 14076 56870;56871 56871 VAQYVVR 7 0 1 Unmodified _VAQYVVR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4;K7EPV1;K7ESA5;Q12873;B4DLC6 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 417.7447 2 417.745245 833.475937 NaN NaN NaN 0.15502 6.4761E-05 NaN NaN NaN NaN 33.396 0.2197 33.396 33.281 33.501 0 0 0 0 0.028974 1 14126 87.582 25.584 1 NaN NaN 0 3747000 3747000 0 36277 515;1701 13701 14076 56872 56872 VARPLPAEEPER 12 0 2 Unmodified _VARPLPAEEPER_ 0 0 1 A0A024R7E3;P26358;Q59FP7;I6L9H2;K7ENQ6 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.3709 2 682.370058 1362.72556 NaN NaN NaN 0.11043 7.5352E-05 NaN NaN NaN NaN 27.141 0.21154 27.141 26.994 27.205 0 0 0 0 0.025588 1 12449 72.006 41.436 1 NaN NaN 0 8672400 8672400 0 36278 222 13702 14077 56873 56873 VASAGSAISNASGER 15 0 1 Unmodified _VASAGSAISNASGER_ 0 0 0 B3KRA8;Q86YT6 B3KRA8 B3KRA8 MIB1 E3 ubiquitin-protein ligase MIB1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8427 2 688.841862 1375.66917 76305.77 0.69299 0.00047736 -0.40939 -0.00028201 0.28359 0.00019535 688.841978076986 693.845580926024 26.508 0.1846 26.508 26.404 26.588 1.9073E-06 33 10 5 0 0 0 1.1069E-05 1 11920 92.19 92.19 1 1.4612 1.453 0 7648600 3202300 4446200 36279 933 13703 14078 56874 56874 VASGNDHLVMLTADGDLYTLGCGEQGQLGR 30 0 1 Oxidation (M) _VASGNDHLVM(ox)LTADGDLYTLGCGEQGQLGR_ VASGNDHLVM(1)LTADGDLYTLGCGEQGQLGR VASGNDHLVM(55.78)LTADGDLYTLGCGEQGQLGR 0 1 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.8322 3 1055.16428 3162.47101 59530.63 0.53472 0.00056422 -0.2305 -0.00024321 0.30422 0.000321 1055.83258681899 1058.83460749308 104.25 0.50647 104.25 103.98 104.49 0 149 41 6 0 0 0 2.8114E-11 1 64431 55.783 55.783 1 0.8588 0.90247 0 11591000 5349600 6241800 36280 550 13704 14079 56875 56875 406 VASGNDHLVMLTADGDLYTLGCGEQGQLGR 30 0 1 Oxidation (M) _VASGNDHLVM(ox)LTADGDLYTLGCGEQGQLGR_ VASGNDHLVM(1)LTADGDLYTLGCGEQGQLGR VASGNDHLVM(56.16)LTADGDLYTLGCGEQGQLGR 0 1 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1055.8359 3 1055.16428 3162.47101 58720.95 0.15344 0.0001619 0.23461 0.00024755 0.38805 0.00040945 1055.49894308833 1058.83500902772 103.44 0.40678 103.44 103.23 103.63 0 150 32 7 0 0 0 2.647E-11 1 65368 56.156 56.156 1 1.0765 1.0897 0 20026000 7610500 12416000 36281 550 13704 14079 56876 56876 406 VASGNDHLVMLTADGDLYTLGCGEQGQLGR 30 0 1 Unmodified _VASGNDHLVMLTADGDLYTLGCGEQGQLGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1050.5018 3 1049.83264 3146.4761 58402.89 0.47746 0.00050126 0.2412 0.00025322 0.71866 0.00075448 1050.50207537065 1053.50437327903 120.13 0.46992 120.13 119.87 120.34 7.6294E-06 124 20 11 0 0 0 0.063962 1 70426 6.8967 6.8967 1 1.1437 0.92445 0 11531000 5423900 6107400 36282 550 13704 14080 56877 56877 VASIETGLAAAAAK 14 1 0 Unmodified _VASIETGLAAAAAK_ 0 0 0 O75151;Q8N359;B4DH04;E7ET14;A0A087WW48;Q6P2C5;H0Y3N9;Q9UPP1;H0Y589 O75151;H0Y3N9 O75151 PHF2;PHF8 Lysine-specific demethylase PHF2;Histone lysine demethylase PHF8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.8619 2 636.861534 1271.70852 NaN NaN NaN 0.30318 0.00019309 NaN NaN NaN NaN 71.722 0.69865 71.722 71.243 71.941 0 0 0 0 0.00041083 1 41785 79.659 52.405 1 NaN NaN 0 5234400 5234400 0 36283 1400;1279 13705 14081 56878 56878 VASIETGLAAAAAK 14 1 0 Unmodified _VASIETGLAAAAAK_ 0 0 0 O75151;Q8N359;B4DH04;E7ET14;A0A087WW48;Q6P2C5;H0Y3N9;Q9UPP1;H0Y589 O75151;H0Y3N9 O75151 PHF2;PHF8 Lysine-specific demethylase PHF2;Histone lysine demethylase PHF8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.8614 2 636.861534 1271.70852 77815.86 0.57176 0.00036413 0.34907 0.00022231 0.92084 0.00058645 636.861532437208 640.868413437102 70.429 0.79175 70.429 69.913 70.705 0 204 64 6 0 0 0 3.6332E-06 1 41970 101.95 81.651 1 1.0229 1.0231 0 14034000 7088400 6945400 36284 1400;1279 13705 14081 56879 56879 VASIETGLAAAAAK 14 1 0 Unmodified _VASIETGLAAAAAK_ 0 0 0 O75151;Q8N359;B4DH04;E7ET14;A0A087WW48;Q6P2C5;H0Y3N9;Q9UPP1;H0Y589 O75151;H0Y3N9 O75151 PHF2;PHF8 Lysine-specific demethylase PHF2;Histone lysine demethylase PHF8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.8684 2 636.861534 1271.70852 76949.98 0.52006 0.00033121 0.021483 1.3682E-05 0.54154 0.00034489 636.861500448432 640.868586031576 82.159 0.84187 82.159 81.801 82.643 0 202 50 6 0 0 0 0.00022544 1 44583 65.719 54.126 1 2.1226 1.6837 0 4553900 1378800 3175100 36285 1400;1279 13705 14081 56880 56880 VASIETGLAAAAAK 14 1 0 Unmodified _VASIETGLAAAAAK_ 0 0 0 O75151;Q8N359;B4DH04;E7ET14;A0A087WW48;Q6P2C5;H0Y3N9;Q9UPP1;H0Y589 O75151;H0Y3N9 O75151 PHF2;PHF8 Lysine-specific demethylase PHF2;Histone lysine demethylase PHF8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.861 2 636.861534 1271.70852 77772.05 0.46642 0.00029705 0.11993 7.6382E-05 0.58636 0.00037343 636.861391399581 640.868629660014 82.383 0.84251 82.383 81.986 82.828 0 195 49 6 0 0 0 0.0015172 2 43852 53.124 39.928 1 2.0035 1.5804 0 3231400 1098700 2132600 36286 1400;1279 13705 14081 56881;56882 56882 VASLPGDFK 9 1 0 Unmodified _VASLPGDFK_ 0 0 0 Q7Z5J4;A8MXE8 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 467.256 2 467.255643 932.496732 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.616 1 58.616 58.116 59.116 0 0 0 0 0.0028526 1 33270 80.165 38.513 1 36287 1879 13706 14082 56883 56883 VASMPQEEQELVVTIPK 17 1 0 Oxidation (M) _VASM(ox)PQEEQELVVTIPK_ VASM(1)PQEEQELVVTIPK VASM(74.99)PQEEQELVVTIPK 0 1 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7;E9PIQ3;H0Y799;A0A140T9X8 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 957.9973 2 957.498066 1912.98158 63409.08 0.61549 0.00058933 0.03337 3.1952E-05 0.64886 0.00062128 957.497955327996 961.504990609334 91.827 0.4516 91.827 91.637 92.089 0 106 38 5 0 0 0 3.0834E-05 2 55653 74.987 74.987 1 0.71926 0.72962 0 13419000 6150800 7268500 36288 367 13707 14083 56884;56885 56885 274 VASMPQEEQELVVTIPK 17 1 0 Oxidation (M) _VASM(ox)PQEEQELVVTIPK_ VASM(1)PQEEQELVVTIPK VASM(72.29)PQEEQELVVTIPK 0 1 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A140T9V2;U3KQA6;A0A0G2JHL0;A0A140T9F7;E9PIQ3;H0Y799;A0A140T9X8 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 958.0022 2 957.498066 1912.98158 NaN NaN NaN -0.059411 -5.6886E-05 NaN NaN NaN NaN 91.127 0.49844 91.127 90.958 91.457 -7.6294E-06 0 0 0 2.2041E-05 2 56341 72.29 54.923 1 NaN NaN 0 5146900 5146900 0 36289 367 13707 14083 56886;56887 56886 274 VASSPVMVSNPATR 14 0 1 Oxidation (M) _VASSPVM(ox)VSNPATR_ VASSPVM(1)VSNPATR VASSPVM(45.83)VSNPATR 0 1 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.3718 2 716.366658 1430.71876 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.74 1 44.74 44.24 45.24 0 0 0 0 0.0077865 1 24057 45.829 27.517 1 36290 680 13708 14084 56888 56888 527 VASSPVMVSNPATR 14 0 1 Oxidation (M) _VASSPVM(ox)VSNPATR_ VASSPVM(1)VSNPATR VASSPVM(62.41)VSNPATR 0 1 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.3705 2 716.366658 1430.71876 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.793 1 44.793 44.293 45.293 -3.8147E-06 0 0 0 0.0011516 1 24089 62.408 39.878 1 36291 680 13708 14084 56889 56889 527 VASSPVMVSNPATR 14 0 1 Oxidation (M) _VASSPVM(ox)VSNPATR_ VASSPVM(1)VSNPATR VASSPVM(90.65)VSNPATR 0 1 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.3712 2 716.366658 1430.71876 73418.35 1.1379 0.00081515 -0.18491 -0.00013247 0.95298 0.00068268 716.366629076404 721.370984299379 43.95 0.26072 43.95 43.828 44.089 0 60 22 4 0 0 0 3.1954E-05 2 23924 90.653 75.642 1 0.78793 0.77845 0 15043000 5762000 9280900 36292 680 13708 14084 56890;56891 56890 527 VASTLTEEGGGGGGGGGSVAPKPPR 25 1 1 Unmodified _VASTLTEEGGGGGGGGGSVAPKPPR_ 0 0 1 D3DUR9;Q8TF68;B4DQU6;F5H8L7;E9PHB3;A9X425;A9X424;F5H105 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.383 3 732.373218 2194.09782 70761.27 0.98969 0.00072483 -0.24296 -0.00017793 0.74674 0.00054689 732.707315342903 738.380460747409 41.431 0.74728 41.431 41.102 41.849 -3.8147E-06 354 62 8 0 0 0 1.706E-12 2 21658 72.316 72.316 1 0.79262 0.94061 0 43143000 21557000 21586000 36293 1195 13709 14085 56892;56893 56893 VASTLTEEGGGGGGGGGSVAPKPPR 25 1 1 Unmodified _VASTLTEEGGGGGGGGGSVAPKPPR_ 0 0 1 D3DUR9;Q8TF68;B4DQU6;F5H8L7;E9PHB3;A9X425;A9X424;F5H105 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3811 3 732.373218 2194.09782 70968.91 0.7557 0.00055346 -0.12888 -9.4388E-05 0.62682 0.00045907 732.707588098733 738.380598129658 40.378 0.69997 40.378 40.055 40.755 0 299 57 8 0 0 0 1.2923E-13 3 21396 84.166 84.166 1 0.82824 0.97274 0 60926000 34503000 26423000 36294 1195 13709 14085 56894;56895;56896 56895 VASTLTEEGGGGGGGGGSVAPKPPR 25 1 1 Unmodified _VASTLTEEGGGGGGGGGSVAPKPPR_ 0 0 1 D3DUR9;Q8TF68;B4DQU6;F5H8L7;E9PHB3;A9X425;A9X424;F5H105 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1098.0558 2 1098.05619 2194.09782 NaN NaN NaN -0.033092 -3.6337E-05 NaN NaN NaN NaN 40.435 0.21269 40.435 40.271 40.484 -3.8147E-06 0 0 0 0.00014794 1 21539 50.079 42.535 1 NaN NaN 0 7763200 7763200 0 36295 1195 13709 14085 56897 56897 VASTLTEEGGGGGGGGGSVAPKPPR 25 1 1 Unmodified _VASTLTEEGGGGGGGGGSVAPKPPR_ 0 0 1 D3DUR9;Q8TF68;B4DQU6;F5H8L7;E9PHB3;A9X425;A9X424;F5H105 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 738.3807 3 732.373218 2194.09782 70324.02 0.41735 0.00030565 -0.0028177 -2.0636E-06 0.41453 0.00030359 732.707529953993 738.38070544076 48.346 1.004 48.346 47.807 48.811 0 462 73 8 0 0 0 0.0013564 1 23733 26.5 26.5 1 1.9977 1.7223 0 12475000 3883500 8591200 36296 1195 13709 14085 56898 56898 VASTLTEEGGGGGGGGGSVAPKPPR 25 1 1 Unmodified _VASTLTEEGGGGGGGGGSVAPKPPR_ 0 0 1 D3DUR9;Q8TF68;B4DQU6;F5H8L7;E9PHB3;A9X425;A9X424;F5H105 D3DUR9 D3DUR9 ZNF384 Zinc finger protein 384 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.3807 3 732.373218 2194.09782 70129.18 0.34543 0.00025298 0.14808 0.00010845 0.49351 0.00036143 732.707666428483 738.71500217069 48.734 1.0216 48.734 48.174 49.195 0 509 84 9 0 0 0 0.013301 2 22917 21.841 21.841 1 2.0894 1.7685 0 12254000 4031000 8222600 36297 1195 13709 14085 56899;56900 56899 VASVSQNAIVSAAGNIAR 18 0 1 Unmodified _VASVSQNAIVSAAGNIAR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.9798 2 864.473574 1726.9326 65874.09 0.42876 0.00037065 -0.10046 -8.6843E-05 0.3283 0.00028381 864.473395274718 869.477235904582 89.462 0.44777 89.462 89.203 89.651 0 158 40 6 0 0 0 1.7128E-16 3 53953 118.37 118.37 1 1.4941 1.5487 0 22862000 11503000 11359000 36298 39 13710 14086 56901;56902;56903 56902 VASVSQNAIVSAAGNIAR 18 0 1 Unmodified _VASVSQNAIVSAAGNIAR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.4782 2 864.473574 1726.9326 67345.64 0.44306 0.00038301 0.30651 0.00026497 0.74957 0.00064798 864.474385359233 869.979172580946 88.414 0.51672 88.414 88.229 88.746 7.6294E-06 106 45 4 0 0 0 2.4644E-13 3 54459 112.5 112.5 1 1.4694 1.6066 0 30499000 13888000 16611000 36299 39 13710 14086 56904;56905;56906 56904 VASVSQNAIVSAAGNIAR 18 0 1 Unmodified _VASVSQNAIVSAAGNIAR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 869.4759 2 864.473574 1726.9326 66524.3 0.45188 0.00039064 0.10621 9.1812E-05 0.55808 0.00048245 864.975300341077 869.477485371142 103.24 0.47871 103.24 103.02 103.5 0 119 30 6 0 0 0 4.9113E-05 2 58650 58.32 58.32 1 1.2917 1.0811 0 3924000 1935200 1988800 36300 39 13710 14086 56907;56908 56908 VASVSQNAIVSAAGNIAR 18 0 1 Unmodified _VASVSQNAIVSAAGNIAR_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 869.4794 2 864.473574 1726.9326 66683.1 0.18361 0.00015873 0.023239 2.0089E-05 0.20685 0.00017882 864.473123941574 869.477709083626 103.13 0.42653 103.13 102.88 103.3 7.6294E-06 122 28 5 0 0 0 0.00032737 2 57689 46.481 46.481 1 1.187 0.99595 0 4858100 2500200 2357900 36301 39 13710 14086 56909;56910 56910 VASYSGTVTQATFTR 15 0 1 Unmodified _VASYSGTVTQATFTR_ 0 0 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.9062 2 794.901919 1587.78929 NaN NaN NaN -0.58271 -0.00046319 NaN NaN NaN NaN 62.491 0.22379 62.491 62.439 62.663 3.8147E-06 0 0 0 3.7257E-05 1 36644 85.522 60.667 1 NaN NaN 0 3698900 0 3698900 36302 1833 13711 14087 56911 56911 VATLNSEEESDPPTYK 16 1 0 Unmodified _VATLNSEEESDPPTYK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;C9J5E5;C9JIZ1;C9JZI8;C9JHS7;C9JHZ8;C9JES8;C9JT62;C9JK79;C9JMQ6;C9JQ82;C9JBS3;C9JEJ8;C9JHN6 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 894.4257 2 890.417796 1778.82104 64432.56 0.82772 0.00073701 0.87709 0.00078097 1.7048 0.001518 890.92021243198 894.425099389112 48.742 0.57583 48.742 48.379 48.955 -3.8147E-06 123 43 6 0 0 0 0.003314 1 26444 37.144 37.144 1 1.5295 1.5671 0 17648000 4957700 12690000 36303 154 13712 14088 56912 56912 VATLNSEEESDPPTYK 16 1 0 Unmodified _VATLNSEEESDPPTYK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;C9J5E5;C9JIZ1;C9JZI8;C9JHS7;C9JHZ8;C9JES8;C9JT62;C9JK79;C9JMQ6;C9JQ82;C9JBS3;C9JEJ8;C9JHN6 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 894.4265 2 890.417796 1778.82104 65049.02 0.40518 0.00036078 0.26737 0.00023808 0.67256 0.00059886 890.41785130516 894.926371190139 47.575 0.39516 47.575 47.354 47.749 0 112 28 7 0 0 0 0.00015297 2 26386 75.088 75.088 1 2.249 2.2506 0 15532000 3911800 11620000 36304 154 13712 14088 56913;56914 56913 VATPEVVSK 9 1 0 Unmodified _VATPEVVSK_ 0 0 0 D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367;Q59GD2;Q2XU31;Q7Z5Y4;Q56H36 D1KF47 D1KF47 PAX6 Paired box protein Pax-6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.2689 2 465.26875 928.522947 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.796 1 31.796 31.296 32.296 0 0 0 0 0.046803 1 15785 47.603 16.313 1 36305 927 13713 14089 56915 56915 VATTSVITIVK 11 1 0 Unmodified _VATTSVITIVK_ 0 0 0 A0A024R804;A8WFP5;O60675 A0A024R804 A0A024R804 MAFK Transcription factor MafK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.36 2 566.352814 1130.69108 81167.85 1.142 0.00064676 -0.68705 -0.00038911 0.45492 0.00025765 566.352293212141 570.359466056112 80.818 0.59628 80.818 80.529 81.126 0 289 51 8 0 0 0 0.00041914 1 48039 79.974 79.974 1 1.4161 1.5957 0 75283000 33578000 41705000 36306 239 13714 14090 56916 56916 VATTSVITIVK 11 1 0 Unmodified _VATTSVITIVK_ 0 0 0 A0A024R804;A8WFP5;O60675 A0A024R804 A0A024R804 MAFK Transcription factor MafK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.36 2 566.352814 1130.69108 81150.42 0.85198 0.00048252 -0.52312 -0.00029627 0.32886 0.00018625 566.352410735638 570.359572067743 79.692 0.63624 79.692 79.409 80.045 0 266 49 8 0 0 0 0.0012566 1 48438 68.893 68.893 1 1.4169 1.5836 0 98553000 41055000 57498000 36307 239 13714 14090 56917 56917 VATTSVITIVK 11 1 0 Unmodified _VATTSVITIVK_ 0 0 0 A0A024R804;A8WFP5;O60675 A0A024R804 A0A024R804 MAFK Transcription factor MafK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.36 2 566.352814 1130.69108 80417.87 0.57432 0.00032527 -0.39001 -0.00022088 0.18432 0.00010439 566.35246599343 570.359647061882 92.581 0.5748 92.581 92.331 92.906 0 151 30 8 0 0 0 0.00041914 2 51549 79.974 79.974 1 2.3273 1.873 0 21946000 6541600 15404000 36308 239 13714 14090 56918;56919 56919 VATTSVITIVK 11 1 0 Unmodified _VATTSVITIVK_ 0 0 0 A0A024R804;A8WFP5;O60675 A0A024R804 A0A024R804 MAFK Transcription factor MafK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.3604 2 566.352814 1130.69108 79892.78 0.30031 0.00017008 -0.19153 -0.00010847 0.10878 6.1606E-05 566.352623835703 570.359736108525 92.417 0.64967 92.417 92.109 92.758 -7.6294E-06 162 33 8 0 0 0 0.00106 2 50572 70.399 70.399 1 2.337 1.9306 0 11923000 3833000 8090400 36309 239 13714 14090 56920;56921 56920 VATVSLPR 8 0 1 Unmodified _VATVSLPR_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 421.7585 2 421.758352 841.502152 NaN NaN NaN 0.2531 0.00010675 NaN NaN NaN NaN 51.599 0.40071 51.599 51.548 51.948 0 0 0 0 0.0088302 1 28608 79.451 37.949 1 NaN NaN 0 155150000 155150000 0 + 36310 1148 13715 14091 56922 56922 VATVSLPR 8 0 1 Unmodified _VATVSLPR_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.7585 2 421.758352 841.502152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.97 1 50.97 50.47 51.47 -3.8147E-06 0 0 0 0.00424 1 28836 91.626 38.943 1 + 36311 1148 13715 14091 56923 56923 VATVSLPR 8 0 1 Unmodified _VATVSLPR_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 421.7577 2 421.758352 841.502152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.623 1 58.623 58.123 59.123 -3.8147E-06 0 0 0 0.051569 1 29842 54.157 22.868 1 + 36312 1148 13715 14091 56924 56924 VATVSLPR 8 0 1 Unmodified _VATVSLPR_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 421.7583 2 421.758352 841.502152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.39 1 59.39 58.89 59.89 0 0 0 0 0.026541 1 30302 64.567 23.065 1 + 36313 1148 13715 14091 56925 56925 VATVSLPR 8 0 1 Unmodified _VATVSLPR_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 421.7586 2 421.758352 841.502152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.165 1 60.165 59.665 60.665 0 0 0 0 0.050146 1 30775 54.611 22.676 1 + 36314 1148 13715 14091 56926 56926 VATVSLPR 8 0 1 Unmodified _VATVSLPR_ 0 0 0 CON__P00761 CON__P00761 CON__P00761 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 421.7596 2 421.758352 841.502152 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.549 1 58.549 58.049 59.049 -3.8147E-06 0 0 0 0.014232 1 29147 71.342 30.04 1 + 36315 1148 13715 14091 56927 56927 VATWFNQPAR 10 0 1 Unmodified _VATWFNQPAR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4;H3BTH3;B4DGL7 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.3094 2 595.309272 1188.60399 77921.45 0.52592 0.00031308 -0.38848 -0.00023127 0.13743 8.1816E-05 595.309042880616 600.312929389861 75.874 0.86541 75.874 75.276 76.141 0 330 60 9 0 0 0 1.8059E-09 1 40368 130.27 110.78 1 0.89834 0.77044 0 41942000 23717000 18225000 36316 733 13716 14092 56928 56928 VATWFNQPAR 10 0 1 Unmodified _VATWFNQPAR_ 0 0 0 Q6NZ55;A8K4C8;P26373;J3QSB4;H3BTH3;B4DGL7 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.313 2 595.309272 1188.60399 76733.56 0.45482 0.00027076 -0.26853 -0.00015986 0.18629 0.0001109 595.30912884405 600.313141472379 76.194 0.8632 76.194 75.608 76.471 0 303 57 8 0 0 0 0.039394 1 39502 39.022 39.022 1 0.90785 0.79191 0 41620000 23325000 18295000 36317 733 13716 14092 56929 56929 VATWFNQPARK 11 1 1 Unmodified _VATWFNQPARK_ 0 0 1 Q6NZ55;A8K4C8;P26373;J3QSB4;H3BTH3;B4DGL7 Q6NZ55 Q6NZ55 RPL13 60S ribosomal protein L13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 445.9142 3 439.906928 1316.69895 90483.25 -0.16328 -7.1827E-05 0.0059771 2.6294E-06 -0.1573 -6.9198E-05 439.90687082898 445.914368667026 51.646 0.60778 51.646 51.374 51.982 0 203 43 7 0 0 0 0.021439 1 24852 25.437 25.437 1 0.85956 0.72207 0 4755900 2466900 2289100 36318 733 13717 14093 56930 56930 VAVEEVDEEGK 11 1 0 Unmodified _VAVEEVDEEGK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.2979 2 602.290608 1202.56666 78159.9 0.65577 0.00039496 0.11448 6.8951E-05 0.77025 0.00046391 602.290620442992 606.297715042646 32.411 0.90884 32.411 32.124 33.033 0 492 85 9 0 0 0 2.3069E-12 2 15959 140.45 130.22 1 1.3135 1.5076 0 197770000 81959000 115810000 36319 1440 13718 14094 56931;56932 56931 VAVEEVDEEGK 11 1 0 Unmodified _VAVEEVDEEGK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.2983 2 602.290608 1202.56666 77902.31 0.68565 0.00041296 -0.15062 -9.0718E-05 0.53503 0.00032224 602.290405052732 606.297572042011 31.986 1.1288 31.986 31.462 32.591 1.9073E-06 594 106 7 0 0 0 2.3195E-08 2 15657 121.73 111.5 1 1.2896 1.4604 0 135840000 58538000 77302000 36320 1440 13718 14094 56933;56934 56933 VAVEEVDEEGK 11 1 0 Unmodified _VAVEEVDEEGK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.298 2 602.290608 1202.56666 78195.19 0.48774 0.00029376 -0.0073089 -4.4021E-06 0.48043 0.00028936 602.290570768478 606.297657067934 37.626 0.92027 37.626 37.242 38.162 0 390 73 9 0 0 0 0.0003695 2 16863 83.869 74.655 1 1.4135 1.1491 0 29223000 11127000 18096000 36321 1440 13718 14094 56935;56936 56935 VAVEEVDEEGK 11 1 0 Unmodified _VAVEEVDEEGK_ 0 0 0 P02545;W8QEH3;Q5I6Y5;Q5TCI8;B4DFR3;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 606.2978 2 602.290608 1202.56666 78461.55 0.3588 0.0002161 0.2006 0.00012082 0.55939 0.00033692 602.290685450666 606.297783652397 37.827 0.88412 37.827 37.462 38.346 0 421 70 9 0 0 0 0.00035138 2 16480 85.29 81.719 1 1.3494 1.0885 0 23254000 9491900 13762000 36322 1440 13718 14094 56937;56938 56938 VAVEYLDPSPEVQK 14 1 0 Unmodified _VAVEYLDPSPEVQK_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.9135 2 787.409046 1572.80354 68372.3 0.5052 0.0003978 -0.059523 -4.6869E-05 0.44567 0.00035093 787.910532141372 791.416028126229 78.506 0.56712 78.506 78.243 78.81 0 280 48 8 0 0 0 3.2513E-06 2 47513 103.08 103.08 1 0.99873 1.1255 0 68215000 33049000 35166000 36323 600 13719 14095 56939;56940 56940 VAVEYLDPSPEVQK 14 1 0 Unmodified _VAVEYLDPSPEVQK_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.9136 2 787.409046 1572.80354 68069.32 0.83389 0.00065661 -0.49113 -0.00038672 0.34276 0.00026989 787.910647291304 791.415935285387 91.048 0.68992 91.048 90.7 91.39 0 247 42 8 0 0 0 0.0020442 2 50404 49.5 49.5 1 1.0585 0.84655 0 8850400 3953500 4896800 36324 600 13719 14095 56941;56942 56942 VAVEYLDPSPEVQK 14 1 0 Unmodified _VAVEYLDPSPEVQK_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.9184 2 787.409046 1572.80354 67793.17 0.58549 0.00046102 -0.68004 -0.00053547 -0.094541 -7.4443E-05 787.409169975231 791.415855133251 90.906 0.62537 90.906 90.628 91.254 0 212 36 8 0 0 0 0.00022162 2 49542 66.262 66.262 1 1.0135 0.83245 0 9476700 4449000 5027800 36325 600 13719 14095 56943;56944 56943 VAVFFGGLSIK 11 1 0 Unmodified _VAVFFGGLSIK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;B4DIJ6;F6UJC5;A0A140TA18;F6QYI9;A0A0G2JJL7;F6R6M7;B4DIZ8;A0A140T9K2;A0A140T9N3 A0A024RCM3 A0A024RCM3 hCG_2005638;DDX39B Spliceosome RNA helicase DDX39B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.3448 2 569.336967 1136.65938 82782.05 0.51809 0.00029497 -0.11682 -6.6507E-05 0.40127 0.00022846 569.336850411148 573.343935595698 114.5 0.84107 114.5 114.09 114.93 7.6294E-06 187 58 5 0 0 0 0.00041003 2 72748 80.688 80.688 1 2.3268 2.4522 0 15451000 5765400 9685900 36326 362 13720 14096 56945;56946 56946 VAVFFGGLSIK 11 1 0 Unmodified _VAVFFGGLSIK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;B4DIJ6;F6UJC5;A0A140TA18;F6QYI9;A0A0G2JJL7;F6R6M7;B4DIZ8;A0A140T9K2;A0A140T9N3 A0A024RCM3 A0A024RCM3 hCG_2005638;DDX39B Spliceosome RNA helicase DDX39B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.3369 2 569.336967 1136.65938 82319.75 0.58776 0.00033463 -0.22361 -0.00012731 0.36414 0.00020732 569.336827183484 573.34393242542 113.88 0.81804 113.88 113.48 114.3 7.6294E-06 209 59 6 0 0 0 0.0018103 2 73847 64.654 64.654 1 2.3025 2.3218 0 16226000 5279400 10946000 36327 362 13720 14096 56947;56948 56948 VAVFFGGLSIK 11 1 0 Unmodified _VAVFFGGLSIK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;B4DIJ6;F6UJC5;A0A140TA18;F6QYI9;A0A0G2JJL7;F6R6M7;B4DIZ8;A0A140T9K2;A0A140T9N3 A0A024RCM3 A0A024RCM3 hCG_2005638;DDX39B Spliceosome RNA helicase DDX39B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 573.3443 2 569.336967 1136.65938 80267 0.82987 0.00047247 0.020385 1.1606E-05 0.85025 0.00048408 569.336913157365 573.343989096408 125.82 0.54346 125.82 125.58 126.13 7.6294E-06 81 24 6 0 0 0 0.02141 2 75662 43.282 43.282 1 0.87125 0.70957 0 2671000 1377300 1293700 36328 362 13720 14096 56949;56950 56950 VAVFFGGLSIK 11 1 0 Unmodified _VAVFFGGLSIK_ 0 0 0 A0A024RCM3;Q13838;A0A0G2JJZ9;Q5STU3;F6WLT2;B4DP52;F6S4E6;A0A0A0MT12;F6TRA5;Q59G92;A0A140T9X3;A0A140T996;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;B4DIJ6;F6UJC5;A0A140TA18;F6QYI9;A0A0G2JJL7;F6R6M7;B4DIZ8;A0A140T9K2;A0A140T9N3 A0A024RCM3 A0A024RCM3 hCG_2005638;DDX39B Spliceosome RNA helicase DDX39B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.3373 2 569.336967 1136.65938 81788.23 0.65216 0.0003713 -0.13088 -7.4517E-05 0.52128 0.00029678 569.336899922022 573.343881586942 125.56 0.51579 125.56 125.31 125.82 0 82 23 4 0 0 0 0.023148 1 74445 42.395 42.395 1 0.90128 0.73048 0 2699800 1309600 1390200 36329 362 13720 14096 56951 56951 VAVGELTDEDVK 12 1 0 Unmodified _VAVGELTDEDVK_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.8362 2 637.827357 1273.64016 NaN NaN NaN 1.5299 0.0009758 NaN NaN NaN NaN 61.433 0.048656 61.433 61.404 61.452 3.8147E-06 0 0 0 0.016329 1 35160 52.579 27.803 1 NaN NaN 0 1638900 0 1638900 36330 955 13721 14097 56952 56952 VAVGELTDEDVK 12 1 0 Unmodified _VAVGELTDEDVK_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3272 2 637.827357 1273.64016 NaN NaN NaN -3.0424 -0.0019405 NaN NaN NaN NaN 60.735 0.37612 60.735 60.537 60.913 0 0 0 0 0.0011759 1 35575 81.017 56.927 1 NaN NaN 0 8401800 8401800 0 36331 955 13721 14097 56953 56953 VAVGELTDEDVK 12 1 0 Unmodified _VAVGELTDEDVK_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;B7Z8Z6 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.8348 2 637.827357 1273.64016 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.634 1 60.634 60.134 61.134 0 0 0 0 8.9303E-05 1 35497 90.827 53.351 1 36332 955 13721 14097 56954 56954 VAVLENQNK 9 1 0 Unmodified _VAVLENQNK_ 0 0 0 Q53X93;Q5U0J5;P16220;Q53RU9;E9PAR2;Q59FC7;G5E998;B2R8K4;F1JVV6;F1JVV5;P18846 Q53X93 Q53X93 CREB1;CREM;EWSR1/ATF1 fusion;ATF1 Cyclic AMP-responsive element-binding protein 1;Cyclic AMP-dependent transcription factor ATF-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.7897 2 507.782556 1013.55056 NaN NaN NaN 0.38868 0.00019736 NaN NaN NaN NaN 25.807 0.32962 25.807 25.594 25.923 0 0 0 0 0.038893 1 11359 50.607 27.178 1 NaN NaN 0 6589700 0 6589700 36333 1488 13722 14098 56955 56955 VAVLENQNK 9 1 0 Unmodified _VAVLENQNK_ 0 0 0 Q53X93;Q5U0J5;P16220;Q53RU9;E9PAR2;Q59FC7;G5E998;B2R8K4;F1JVV6;F1JVV5;P18846 Q53X93 Q53X93 CREB1;CREM;EWSR1/ATF1 fusion;ATF1 Cyclic AMP-responsive element-binding protein 1;Cyclic AMP-dependent transcription factor ATF-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7909 2 507.782556 1013.55056 84654.34 0.91699 0.00046563 0.95386 0.00048435 1.8708 0.00094998 507.782843441907 511.790014405224 25.495 0.27853 25.495 25.328 25.607 -1.9073E-06 37 11 6 0 0 0 0.00068897 2 11110 95.741 83.973 1 0.63202 0.68015 0 21602000 13709000 7893200 36334 1488 13722 14098 56956;56957 56956 VAVLGASGGIGQPLSLLLK 19 1 0 Unmodified _VAVLGASGGIGQPLSLLLK_ 0 0 0 Q0QF37;Q75MT9;Q6FHZ0;A0A024R4K3;P40926 Q0QF37 Q0QF37 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.0533 2 897.048387 1792.08222 NaN NaN NaN -1.0851 -0.00097339 NaN NaN NaN NaN 131.22 0.48804 131.22 130.98 131.47 -1.5259E-05 0 0 0 0.0025046 1 85533 47.915 36.049 1 NaN NaN 0 5213900 0 5213900 36335 156 13723 14099 56958 56958 VAVLGASGGIGQPLSLLLK 19 1 0 Unmodified _VAVLGASGGIGQPLSLLLK_ 0 0 0 Q0QF37;Q75MT9;Q6FHZ0;A0A024R4K3;P40926 Q0QF37 Q0QF37 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.0556 2 897.048387 1792.08222 67370.95 0.82875 0.00074343 -0.7529 -0.00067538 0.075852 6.8043E-05 897.549386258013 901.556857917543 130.8 0.4805 130.8 130.56 131.04 0 106 33 5 0 0 0 1.2371E-05 1 87371 70.622 70.622 1 3.0587 3.0878 0 8168300 2280200 5888100 36336 156 13723 14099 56959 56959 VAVLISGTGSNLQALIDSTR 20 0 1 Unmodified _VAVLISGTGSNLQALIDSTR_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93;A0A140TA71 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1008.0618 2 1008.06021 2014.10587 NaN NaN NaN -0.013367 -1.3475E-05 NaN NaN NaN NaN 120.79 0.23225 120.79 120.66 120.89 0 0 0 0 0.00084655 1 79860 63.709 58.102 1 NaN NaN 0 3289800 3289800 0 36337 1507 13724 14100 56960 56960 VAVLQALASTVNR 13 0 1 Unmodified _VAVLQALASTVNR_ 0 0 0 Q96EY7;B8ZZQ4;B4DF73 Q96EY7 Q96EY7 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.36 2 671.396076 1340.7776 74831.63 0.83299 0.00055927 -0.56652 -0.00038036 0.26647 0.00017891 671.395743278976 676.399561124865 118.65 0.39547 118.65 118.46 118.86 0 62 20 5 0 0 0 0.045821 1 69218 49.5 49.5 1 1.5345 1.3262 0 1639100 762180 876870 36338 1963 13725 14101 56961 56961 VAVPLLSSGGQVAVLELR 18 0 1 Unmodified _VAVPLLSSGGQVAVLELR_ 0 0 0 B3KSY4;B4DKU9;A0A0A6YYL4;P57737;B3KUH7 B3KSY4 B3KSY4 hCG_1787779;CORO7-PAM16;CORO7 Coronin;Coronin-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 909.5419 2 904.535643 1807.05673 65028.68 0.49585 0.00044851 0.39389 0.00035629 0.88974 0.0008048 904.535470717895 909.539670771084 125.09 0.32826 125.09 124.93 125.26 0 54 20 5 0 0 0 5.9376E-05 2 81268 55.196 55.196 1 1.499 1.5806 0 4079300 1694700 2384700 36339 495 13726 14102 56962;56963 56963 VAVPLLSSGGQVAVLELR 18 0 1 Unmodified _VAVPLLSSGGQVAVLELR_ 0 0 0 B3KSY4;B4DKU9;A0A0A6YYL4;P57737;B3KUH7 B3KSY4 B3KSY4 hCG_1787779;CORO7-PAM16;CORO7 Coronin;Coronin-7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 909.5394 2 904.535643 1807.05673 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.21 1 125.21 124.71 125.71 0 0 0 0 0.00025257 1 81384 63.185 54.881 1 36340 495 13726 14102 56964 56964 VAVPLLSSGGQVAVLELR 18 0 1 Unmodified _VAVPLLSSGGQVAVLELR_ 0 0 0 B3KSY4;B4DKU9;A0A0A6YYL4;P57737;B3KUH7 B3KSY4 B3KSY4 hCG_1787779;CORO7-PAM16;CORO7 Coronin;Coronin-7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 909.5415 2 904.535643 1807.05673 65846.97 0.97773 0.00088439 0.55261 0.00049986 1.5303 0.0013843 905.038348799367 910.041062885627 124.71 0.32695 124.71 124.54 124.87 0 78 21 5 0 0 0 0.01064 1 82962 28.789 28.789 1 1.9248 1.9747 0 4994100 1371600 3622500 36341 495 13726 14102 56965 56965 VAVQGDVVR 9 0 1 Unmodified _VAVQGDVVR_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.7767 2 471.771991 941.529429 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.842 1 32.842 32.342 33.342 0 0 0 0 0.0024816 1 16336 84.498 26.33 1 36342 1454 13727 14103 56966 56966 VAVTPPGLAR 10 0 1 Unmodified _VAVTPPGLAR_ 0 0 0 B4DJ81;E5KRK5;P28331;Q9P1A0 B4DJ81 B4DJ81 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.8015 2 490.798009 979.581465 NaN NaN NaN -0.42714 -0.00020964 NaN NaN NaN NaN 58.271 0.26134 58.271 58.068 58.329 0 0 0 0 0.0099174 1 33849 63.419 25.86 1 NaN NaN 0 7134400 0 7134400 36343 986 13728 14104 56967 56967 VAVTSSSSSSSSSSSIPSAEK 21 1 0 Unmodified _VAVTSSSSSSSSSSSIPSAEK_ 0 0 0 J3KSW8;U6FSN9;Q6WCQ1 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 990.4806 2 986.471288 1970.92802 NaN NaN NaN 0.39255 0.00038724 NaN NaN NaN NaN 34.739 0.14818 34.739 34.621 34.77 0 0 0 0 0.0006432 1 17602 43.592 29.031 1 NaN NaN 0 3529200 0 3529200 36344 1330 13729 14105 56968 56968 VAVVAGYGDVGK 12 1 0 Unmodified _VAVVAGYGDVGK_ 0 0 0 P23526;Q1RMG2 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.8188 2 567.811313 1133.60807 82275.35 0.67073 0.00038085 0.82125 0.00046631 1.492 0.00084716 567.811300931308 571.81838837871 55.73 0.43806 55.73 55.477 55.915 3.8147E-06 141 33 7 0 0 0 0.00026837 2 31315 73.499 54.405 1 1.3373 1.3347 0 18899000 7085000 11814000 36345 1512 13730 14106 56969;56970 56969 VAVVAGYGDVGK 12 1 0 Unmodified _VAVVAGYGDVGK_ 0 0 0 P23526;Q1RMG2 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 571.8188 2 567.811313 1133.60807 82584.37 0.56294 0.00031964 -0.022229 -1.2622E-05 0.54071 0.00030702 567.81117980494 571.818293144135 54.792 0.37001 54.792 54.6 54.97 0 148 31 7 0 0 0 0.00026837 2 31308 78.655 54.405 1 1.325 1.4366 0 22182000 8495400 13687000 36346 1512 13730 14106 56971;56972 56971 VAVVNQIAR 9 0 1 Unmodified _VAVVNQIAR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.2957 2 485.295633 968.576714 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.057 1 46.057 45.557 46.557 -3.8147E-06 0 0 0 0.0027248 1 24843 82.305 21.333 1 36347 415 13731 14107 56973 56973 VAVVNQIAR 9 0 1 Unmodified _VAVVNQIAR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2996 2 485.295633 968.576714 86673.09 0.26102 0.00012667 0.37323 0.00018113 0.63425 0.0003078 485.295975907128 490.299734559631 45.042 0.62897 45.042 44.727 45.356 0 171 51 4 0 0 0 0.0036169 2 24553 71.342 16.673 1 1.1616 1.2702 0 35170000 16279000 18891000 36348 415 13731 14107 56974;56975 56974 VAYIPDEMAAQQNPLQQPR 19 0 1 Oxidation (M) _VAYIPDEM(ox)AAQQNPLQQPR_ VAYIPDEM(1)AAQQNPLQQPR VAYIPDEM(85.81)AAQQNPLQQPR 0 1 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1098.5449 2 1093.03895 2184.06335 NaN NaN NaN 0.53783 0.00058787 NaN NaN NaN NaN 83.414 0.45134 83.414 83.206 83.657 0 0 0 0 5.0952E-10 1 49851 85.813 78.088 1 NaN NaN 0 9951800 0 9951800 36349 1364 13732 14108 56976 56976 1030 VAYIPDEMAAQQNPLQQPR 19 0 1 Oxidation (M) _VAYIPDEM(ox)AAQQNPLQQPR_ VAYIPDEM(1)AAQQNPLQQPR VAYIPDEM(68.44)AAQQNPLQQPR 0 1 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1098.5443 2 1093.03895 2184.06335 NaN NaN NaN 0.22613 0.00024716 NaN NaN NaN NaN 82.584 0.41035 82.584 82.445 82.855 0 0 0 0 1.5215E-06 2 50492 68.44 55.24 1 NaN NaN 0 8909500 0 8909500 36350 1364 13732 14108 56977;56978 56977 1030 VAYPQADSNLR 11 0 1 Unmodified _VAYPQADSNLR_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3147 2 617.314751 1232.61495 77768.44 0.69037 0.00042617 0.068013 4.1985E-05 0.75838 0.00046816 617.314453362602 622.318596350256 42.062 0.77153 42.062 41.568 42.339 0 132 60 5 0 0 0 0.0063276 1 22234 54.608 44.084 1 1.7218 1.7824 0 20392000 7089600 13302000 36351 1070 13733 14109 56979 56979 VAYPQADSNLR 11 0 1 Unmodified _VAYPQADSNLR_ 0 0 0 B4E206;Q8WUM0;A0A024R3R6;B4E3T7 B4E206 B4E206 NUP133 Nuclear pore complex protein Nup133 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.3201 2 617.314751 1232.61495 78250.13 0.62935 0.00038851 0.49654 0.00030652 1.1259 0.00069503 617.314980500327 622.319236185805 41.356 0.38453 41.356 41.117 41.502 0 90 33 4 0 0 0 0.013414 1 22137 63.397 57.362 1 1.3703 1.3535 0 12696000 6292300 6403400 36352 1070 13733 14109 56980 56980 VAYVQLAHGQTFTFPDLFPEK 21 1 0 Unmodified _VAYVQLAHGQTFTFPDLFPEK_ 0 0 0 A0A024RCB2;Q16540 A0A024RCB2 A0A024RCB2 MRPL23 39S ribosomal protein L23, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.0865 3 803.414354 2407.22123 70053.17 0.95512 0.00076736 0.31438 0.00025257 1.2695 0.0010199 803.74850506048 806.086605056138 120.58 0.55569 120.58 120.31 120.86 0 202 39 9 0 0 0 2.8253E-07 2 79686 54.658 54.658 1 1.2668 1.2657 0 14133000 5869500 8263500 36353 357 13734 14110 56981;56982 56981 VAYVSFGPHAGK 12 1 0 Unmodified _VAYVSFGPHAGK_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914 E7EPB3 E7EPB3 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 616.8251 2 616.824755 1231.63496 76210.95 0.57102 0.00035222 -0.053461 -3.2976E-05 0.51756 0.00031925 617.326183064129 620.831781614184 48.149 0.75834 48.149 47.763 48.521 0 309 56 9 0 0 0 0.00015222 2 26047 92.732 92.732 1 0.95851 1.1319 0 374190000 213690000 160510000 36354 645 13735 14111 56983;56984 56984 VAYVSFGPHAGK 12 1 0 Unmodified _VAYVSFGPHAGK_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914 E7EPB3 E7EPB3 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.224 3 411.552262 1231.63496 92028.55 0.1984 8.165E-05 -0.19686 -8.1019E-05 0.0015336 6.3115E-07 411.552362861394 414.223518768936 48.076 1.1131 48.076 47.791 48.904 3.8147E-06 665 90 11 0 0 0 5.6438E-05 2 26034 61.435 57.762 1 0.92606 1.1083 0 885420000 440360000 445060000 36355 645 13735 14111 56985;56986 56985 VAYVSFGPHAGK 12 1 0 Unmodified _VAYVSFGPHAGK_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914 E7EPB3 E7EPB3 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 411.5524 3 411.552262 1231.63496 92383.47 0.24273 9.9895E-05 -0.095162 -3.9164E-05 0.14756 6.0731E-05 411.552428313195 414.223544342021 46.476 1.0511 46.476 46.218 47.269 3.8147E-06 607 87 13 0 0 0 0.00026517 2 25553 50.786 47.254 1 1.0143 1.1995 0 1687600000 848090000 839540000 36356 645 13735 14111 56987;56988 56988 VAYVSFGPHAGK 12 1 0 Unmodified _VAYVSFGPHAGK_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914 E7EPB3 E7EPB3 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.8329 2 616.824755 1231.63496 76076.73 0.47725 0.00029438 0.065707 4.053E-05 0.54296 0.00033491 616.824846392396 620.83192775195 46.476 0.93657 46.476 45.99 46.926 0 358 75 10 0 0 0 3.1705E-18 2 25572 147.2 139.72 1 0.92903 1.0957 0 758030000 396140000 361900000 36357 645 13735 14111 56989;56990 56990 VAYVSFGPHAGK 12 1 0 Unmodified _VAYVSFGPHAGK_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914 E7EPB3 E7EPB3 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 620.8326 2 616.824755 1231.63496 75637.91 0.48431 0.00029874 0.00082624 5.0965E-07 0.48514 0.00029924 616.824663622453 620.831743008228 55.036 0.95694 55.036 54.759 55.716 0 368 61 10 0 0 0 0.00032618 2 27424 72.643 72.643 1 0.93038 0.76804 0 42705000 21380000 21325000 36358 645 13735 14111 56991;56992 56991 VAYVSFGPHAGK 12 1 0 Unmodified _VAYVSFGPHAGK_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914 E7EPB3 E7EPB3 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 414.2237 3 411.552262 1231.63496 92068.3 -0.070765 -2.9124E-05 -0.085767 -3.5297E-05 -0.15653 -6.4421E-05 411.552290936669 414.223586528896 55.058 1.6381 55.058 54.732 56.37 0 511 106 10 0 0 0 0.022298 1 27447 21.55 21.55 1 0.95604 0.82032 0 80434000 39734000 40700000 36359 645 13735 14111 56993 56993 VAYVSFGPHAGK 12 1 0 Unmodified _VAYVSFGPHAGK_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914 E7EPB3 E7EPB3 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 414.2235 3 411.552262 1231.63496 92220.84 -0.32094 -0.00013208 0.05292 2.1779E-05 -0.26802 -0.0001103 411.552336346895 414.223644987886 55.28 1.0972 55.28 54.985 56.082 0 418 68 10 0 0 0 0.043163 1 26943 14.631 14.631 1 1.0017 0.84853 0 61593000 29834000 31759000 36360 645 13735 14111 56994 56994 VAYVSFGPHAGK 12 1 0 Unmodified _VAYVSFGPHAGK_ 0 0 0 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914 E7EPB3 E7EPB3 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.8243 2 616.824755 1231.63496 76306.52 0.37998 0.00023438 -0.24371 -0.00015033 0.13627 8.4056E-05 616.824727724925 620.831771125675 55.244 0.93571 55.244 54.966 55.901 0 331 55 10 0 0 0 0.00018337 2 26984 75.378 75.378 1 0.97321 0.8061 0 34145000 15901000 18244000 36361 645 13735 14111 56995;56996 56996 VCACHLCGGR 10 0 1 Unmodified _VCACHLCGGR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.1726 3 397.172294 1188.49505 94682.11 0.19675 7.8144E-05 -0.41304 -0.00016405 -0.21629 -8.5905E-05 397.172193266256 400.508445741772 17.746 0.23301 17.746 17.632 17.865 0 33 8 7 0 0 0 0.025756 1 4660 56.432 53.22 1 0.55972 0.55615 0 7411200 4656700 2754500 36362 406 13736 14112 56997 56997 VCACHLCGGR 10 0 1 Unmodified _VCACHLCGGR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.2556 2 595.254802 1188.49505 79940.76 0.62575 0.00037248 0.21781 0.00012965 0.84356 0.00050213 595.254968239046 600.259313437238 17.755 0.20927 17.755 17.656 17.865 0 23 7 6 0 0 0 0.0026805 2 4661 67.981 64.046 1 0.57321 0.57659 0 6590800 4404300 2186400 36363 406 13736 14112 56998;56999 56998 VCACHLCGGR 10 0 1 Unmodified _VCACHLCGGR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.2549 2 595.254802 1188.49505 79700.24 0.10094 6.0084E-05 -0.42693 -0.00025413 -0.32599 -0.00019404 595.25421001358 600.258394525009 18.878 0.10506 18.878 18.799 18.904 0 12 3 4 0 0 0 0.010907 1 4794 52.716 52.368 1 0.89121 0.77345 0 2418600 1305500 1113100 36364 406 13736 14112 57000 57000 VCACHLCGGR 10 0 1 Unmodified _VCACHLCGGR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.2592 2 595.254802 1188.49505 79355.3 0.13919 8.2856E-05 -0.33943 -0.00020205 -0.20024 -0.00011919 595.25503478239 600.258996393197 18.801 0.1301 18.801 18.707 18.837 0 24 6 6 0 0 0 0.034405 2 4268 41.029 41.029 1 0.98411 0.85991 0 1413900 586800 827120 36365 406 13736 14112 57001;57002 57002 VCEEIAIIPSK 11 1 0 Unmodified _VCEEIAIIPSK_ 0 0 0 H0YN88;A0A075B716;P08708;H0YN73 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8465 2 629.839213 1257.66387 77501.35 0.9809 0.00061781 0.20675 0.00013022 1.1877 0.00074803 629.839146279411 633.846534013122 80.867 0.56715 80.867 80.604 81.171 0 161 47 5 0 0 0 1.6204E-05 1 48105 106.4 93.218 1 1.1155 1.1568 0 29392000 17396000 11997000 36366 396 13737 14113 57003 57003 VCEEIAIIPSK 11 1 0 Unmodified _VCEEIAIIPSK_ 0 0 0 H0YN88;A0A075B716;P08708;H0YN73 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 629.8393 2 629.839213 1257.66387 76673.2 0.80741 0.00050854 0.29958 0.00018869 1.107 0.00069723 629.839183377627 633.846460452219 79.829 0.48494 79.829 79.56 80.045 0 161 38 6 0 0 0 1.6204E-05 2 48525 106.4 83.498 1 0.84946 0.88492 0 24480000 12635000 11845000 36367 396 13737 14113 57004;57005 57004 VCEEIAIIPSK 11 1 0 Unmodified _VCEEIAIIPSK_ 0 0 0 H0YN88;A0A075B716;P08708;H0YN73 H0YN88 H0YN88 RPS17 40S ribosomal protein S17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.8403 2 629.839213 1257.66387 77157.25 0.54833 0.00034536 0.21345 0.00013444 0.76178 0.0004798 629.83917894033 633.846464414144 92.392 0.46788 92.392 92.205 92.673 0 75 23 4 0 0 0 0.060718 1 51398 33.225 27.911 1 0.76844 0.64369 0 1856300 1168000 688360 36368 396 13737 14113 57006 57006 VCENIPIVLCGNK 13 1 0 Unmodified _VCENIPIVLCGNK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.4276 2 758.386536 1514.75852 70547.81 0.54916 0.00041647 1.0595 0.0008035 1.6087 0.00122 758.387905672166 762.394674780906 88.973 0.95924 88.973 88.559 89.518 7.6294E-06 254 76 7 0 0 0 0.021295 1 54018 70.1 70.1 1 2.5517 2.7518 0 37500000 11454000 26045000 36369 1082 13738 14114 57007 57007 VCENIPIVLCGNK 13 1 0 Unmodified _VCENIPIVLCGNK_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 B5MDF5 B5MDF5 RAN GTP-binding nuclear protein Ran MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.3958 2 758.386536 1514.75852 71269.29 0.4639 0.00035182 0.37837 0.00028695 0.84227 0.00063876 758.387295573831 762.394587047462 88.395 0.73383 88.395 87.941 88.675 7.6294E-06 227 66 7 0 0 0 5.4717E-05 1 54571 96.342 86.454 1 2.3963 2.6438 0 43949000 16786000 27163000 36370 1082 13738 14114 57008 57008 VCFVGDGFTR 10 0 1 Unmodified _VCFVGDGFTR_ 0 0 0 Q5J7U2;O95478;A0A0A0MQZ6;H0YAI9 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.2786 2 579.274041 1156.53353 78912.98 0.544 0.00031512 -0.43317 -0.00025092 0.11083 6.4201E-05 579.273590825123 584.278218157485 75.001 0.66253 75.001 74.695 75.358 0 208 53 6 0 0 0 0.0029629 1 43971 66.692 38.474 1 0.98354 1.0215 0 22378000 12318000 10061000 36371 1427 13739 14115 57009 57009 VCFVGDGFTR 10 0 1 Unmodified _VCFVGDGFTR_ 0 0 0 Q5J7U2;O95478;A0A0A0MQZ6;H0YAI9 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.278 2 579.274041 1156.53353 81113.29 0.50431 0.00029213 -0.59046 -0.00034204 -0.086154 -4.9907E-05 579.273301184299 584.278130281388 73.826 0.69569 73.826 73.518 74.213 0 217 57 6 0 0 0 0.020901 1 44216 46.462 21.643 1 1.1097 1.195 0 25833000 12937000 12897000 36372 1427 13739 14115 57010 57010 VCFVGDGFTR 10 0 1 Unmodified _VCFVGDGFTR_ 0 0 0 Q5J7U2;O95478;A0A0A0MQZ6;H0YAI9 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.2788 2 579.274041 1156.53353 78811.7 0.48786 0.00028261 0.63819 0.00036969 1.1261 0.00065229 579.273834471836 584.278111829623 85.258 0.75981 85.258 84.89 85.65 0 214 49 7 0 0 0 0.020901 1 46593 46.462 28.553 1 1.2023 1.0279 0 8747000 3570000 5177000 36373 1427 13739 14115 57011 57011 VCFVGDGFTR 10 0 1 Unmodified _VCFVGDGFTR_ 0 0 0 Q5J7U2;O95478;A0A0A0MQZ6;H0YAI9 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.2784 2 579.274041 1156.53353 78218.51 0.52008 0.00030127 0.12023 6.9644E-05 0.6403 0.00037091 579.273993101298 584.278257666341 85.404 0.77277 85.404 85.035 85.808 0 201 47 6 0 0 0 0.0088235 1 45933 55.549 39.887 1 1.1666 0.97277 0 6686400 2865100 3821300 36374 1427 13739 14115 57012 57012 VCLLINK 7 1 0 Unmodified _VCLLINK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 430.257 2 430.257131 858.499709 89643.87 -0.15606 -6.7146E-05 0.32543 0.00014002 0.16937 7.2871E-05 430.257168253946 434.264134910714 61.566 0.65205 61.566 61.247 61.899 3.8147E-06 201 51 6 0 0 0 0.026891 2 35188 87.627 34.529 1 0.91113 0.98309 0 41779000 21702000 20078000 36375 1995 13740 14116 57013;57014 57014 VCLLINK 7 1 0 Unmodified _VCLLINK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.264 2 430.257131 858.499709 91171.52 -0.40932 -0.00017611 -0.014031 -6.0367E-06 -0.42335 -0.00018215 430.257322007975 434.264191074604 60.26 0.56421 60.26 59.972 60.537 0 121 33 6 0 0 0 0.016852 1 35096 97.64 16.642 1 0.94646 1.0466 0 45070000 22881000 22189000 36376 1995 13740 14116 57015 57015 VCLLINK 7 1 0 Unmodified _VCLLINK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 430.2571 2 430.257131 858.499709 92757.49 -0.47447 -0.00020415 0.61777 0.0002658 0.14329 6.1652E-05 430.257306671479 434.264329872493 70.611 0.8849 70.611 70.233 71.118 0 192 56 6 0 0 0 0.050667 1 37154 54.765 19.564 1 1.6625 1.3183 0 10260000 3579700 6680500 36377 1995 13740 14116 57016 57016 VCNFLASQVPFPSR 14 0 1 Unmodified _VCNFLASQVPFPSR_ 0 0 0 A0A0S2Z410;Q99714 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.4156 2 811.4114 1620.80825 NaN NaN NaN -0.090016 -7.304E-05 NaN NaN NaN NaN 106.33 0.63639 106.33 106.09 106.73 0 0 0 0 2.276E-42 1 65978 164.48 145.35 1 NaN NaN 0 15523000 0 15523000 36378 555 13741 14117 57017 57017 VCNFLASQVPFPSR 14 0 1 Unmodified _VCNFLASQVPFPSR_ 0 0 0 A0A0S2Z410;Q99714 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.4152 2 811.4114 1620.80825 66534.83 0.69446 0.0005635 0.046611 3.7821E-05 0.74107 0.00060132 811.412056845136 816.415322352532 105.68 0.7763 105.68 105.39 106.17 7.6294E-06 213 56 5 0 0 0 4.1669E-06 2 67115 100.38 100.38 1 1.3866 1.5186 0 32066000 12065000 20001000 36379 555 13741 14117 57018;57019 57019 VCNFLASQVPFPSR 14 0 1 Unmodified _VCNFLASQVPFPSR_ 0 0 0 A0A0S2Z410;Q99714 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.9138 2 811.4114 1620.80825 65837.41 0.75897 0.00061583 0.13549 0.00010994 0.89446 0.00072577 811.411630863383 816.4156599255 117.63 0.49252 117.63 117.35 117.84 0 89 22 5 0 0 0 0.0025962 1 69314 48.568 42.465 1 1.2384 1.0552 0 8969400 3523600 5445800 36380 555 13741 14117 57020 57020 VCNFLASQVPFPSR 14 0 1 Unmodified _VCNFLASQVPFPSR_ 0 0 0 A0A0S2Z410;Q99714 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 816.4167 2 811.4114 1620.80825 66721.41 0.62026 0.00050329 -1.413 -0.0011465 -0.79276 -0.00064325 811.411400905953 816.415461735027 117.38 0.63664 117.38 117.02 117.66 0 159 29 9 0 0 0 5.0492E-05 2 68264 93.011 93.011 1 1.386 1.1223 0 10443000 4343900 6098600 36381 555 13741 14117 57021;57022 57021 VCNNPGLYSNPDLSAAASLALGK 23 1 0 Unmodified _VCNNPGLYSNPDLSAAASLALGK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1166.5875 2 1166.58372 2331.1529 57057.61 0.11902 0.00013884 0.17805 0.00020771 0.29707 0.00034655 1167.08515288342 1171.09332919375 115.17 0.36698 115.17 114.98 115.34 7.6294E-06 155 23 9 0 0 0 1.7139E-09 2 73151 81.311 81.311 1 0.76013 0.74471 0 21595000 12205000 9389500 36382 908 13742 14118 57023;57024 57023 VCNNPGLYSNPDLSAAASLALGK 23 1 0 Unmodified _VCNNPGLYSNPDLSAAASLALGK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1171.0938 2 1166.58372 2331.1529 56426 0.013309 1.5526E-05 0.28372 0.00033098 0.29703 0.00034651 1167.08608013535 1171.09333541737 114.69 0.37532 114.69 114.51 114.89 0 144 22 9 0 0 0 5.5859E-18 2 74616 112.5 107.79 1 0.84637 0.85486 0 28529000 15884000 12645000 36383 908 13742 14118 57025;57026 57026 VCNNPGLYSNPDLSAAASLALGK 23 1 0 Unmodified _VCNNPGLYSNPDLSAAASLALGK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1167.0867 2 1166.58372 2331.1529 55548.71 -0.0012433 -1.4504E-06 0.42328 0.00049379 0.42204 0.00049234 1167.08575043417 1171.09287437167 127.1 0.58907 127.1 126.81 127.39 7.6294E-06 174 25 12 0 0 0 8.7963E-38 2 76558 143.14 143.14 1 1.6056 1.3045 0 28266000 10823000 17443000 36384 908 13742 14118 57027;57028 57028 VCNNPGLYSNPDLSAAASLALGK 23 1 0 Unmodified _VCNNPGLYSNPDLSAAASLALGK_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1167.0852 2 1166.58372 2331.1529 56310.35 0.1748 0.00020391 0.16594 0.00019359 0.34074 0.0003975 1167.08525139059 1171.09263986735 126.95 0.49637 126.95 126.74 127.24 0 162 22 11 0 0 0 9.663E-17 1 75594 109.48 104.76 1 1.5325 1.2725 0 36737000 13365000 23372000 36385 908 13742 14118 57029 57029 VCNPIITK 8 1 0 Unmodified _VCNPIITK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96H53;E9PS65;Q96BE0;Q9NZ87;Q9NWW3 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.7726 2 472.76532 943.516088 91542.05 0.31469 0.00014877 -0.21948 -0.00010376 0.095208 4.5011E-05 472.765240142922 476.772280171449 39.549 0.52881 39.549 39.243 39.772 0 182 45 7 0 0 0 0.013467 1 20842 65.246 11.041 1 1.366 1.5303 0 111580000 50735000 60847000 36386 1467 13743 14119 57030 57030 VCNPIITK 8 1 0 Unmodified _VCNPIITK_ 0 0 0 V9HW22;P11142;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96H53;E9PS65;Q96BE0;Q9NZ87;Q9NWW3 V9HW22 V9HW22 HEL-S-72p;HSPA8 Heat shock cognate 71 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 472.7655 2 472.76532 943.516088 89535.41 0.11336 5.3591E-05 0.0032159 1.5204E-06 0.11657 5.5112E-05 472.765273870971 476.772303709324 45.764 0.6969 45.764 45.435 46.132 0 205 53 6 0 0 0 0.045643 2 21911 45.335 12.896 1 1.5557 1.2474 0 8270600 3483200 4787400 36387 1467 13743 14119 57031;57032 57032 VCNVAPIAGETK 12 1 0 Unmodified _VCNVAPIAGETK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 629.8261 2 629.826637 1257.63872 76970.74 1.0624 0.00066912 0.010192 6.4193E-06 1.0726 0.00067554 629.82674202906 633.833589189135 41.326 0.31961 41.326 41.128 41.448 0 123 26 6 0 0 0 0.00018473 2 21679 90.827 82.609 1 0.92123 0.90533 0 20152000 11285000 8867900 36388 1721 13744 14120 57033;57034 57033 VCNVAPIAGETK 12 1 0 Unmodified _VCNVAPIAGETK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.3281 2 629.826637 1257.63872 NaN NaN NaN 0.35124 0.00022122 NaN NaN NaN NaN 40.109 0.43873 40.109 39.935 40.374 0 0 0 0 0.018103 2 21395 51.927 39.701 1 NaN NaN 0 14730000 0 14730000 36389 1721 13744 14120 57035;57036 57035 VCNVAPIAGETK 12 1 0 Unmodified _VCNVAPIAGETK_ 0 0 0 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.8358 2 629.826637 1257.63872 75768.38 0.31838 0.00020052 0.87336 0.00055007 1.1917 0.00075059 629.826944759419 633.834460145484 47.061 0.74272 47.061 46.721 47.464 0 247 58 5 0 0 0 0.037101 2 22641 34.755 34.755 1 1.1322 0.88009 0 3406200 1668300 1737900 36390 1721 13744 14120 57037;57038 57037 VCNYGLTFTQK 11 1 0 Unmodified _VCNYGLTFTQK_ 0 0 0 Q9Y277;E5RJN6;E5RHZ6;E5RHE1;E5RK27;E5RFP6 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.827 2 665.826637 1329.63872 NaN NaN NaN 0.29916 0.00019919 NaN NaN NaN NaN 68.072 0.56105 68.072 67.883 68.444 0 0 0 0 0.0029093 1 40341 70.056 60.64 1 NaN NaN 0 34135000 34135000 0 36391 2124 13745 14121 57039 57039 VCTLAIIDPGDSDIIR 16 0 1 Unmodified _VCTLAIIDPGDSDIIR_ 0 0 0 E5RI99;A0A024R9D3;P62888;A0A0B4J213;A0A0C4DH44 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.4621 2 879.458744 1756.90294 64161.46 0.56735 0.00049896 0.013267 1.1668E-05 0.58062 0.00051063 879.45881869264 884.462976137457 114.59 0.86273 114.59 114.3 115.17 0 294 58 7 0 0 0 6.8215E-13 2 72578 123.95 123.95 1 0.81538 0.96448 0 297210000 170030000 127170000 36392 276 13746 14122 57040;57041 57041 VCTLAIIDPGDSDIIR 16 0 1 Unmodified _VCTLAIIDPGDSDIIR_ 0 0 0 E5RI99;A0A024R9D3;P62888;A0A0B4J213;A0A0C4DH44 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 879.9609 2 879.458744 1756.90294 64056.2 0.63254 0.00055629 1.411 0.0012409 2.0436 0.0017972 879.458824209603 884.463076618398 114.22 0.93046 114.22 113.8 114.73 0 708 65 15 0 0 0 1.0965E-06 3 73982 96.64 96.64 1 0.79183 0.91785 0 301210000 174100000 127110000 36393 276 13746 14122 57042;57043;57044 57043 VCTLAIIDPGDSDIIR 16 0 1 Unmodified _VCTLAIIDPGDSDIIR_ 0 0 0 E5RI99;A0A024R9D3;P62888;A0A0B4J213;A0A0C4DH44 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 879.4595 2 879.458744 1756.90294 63693.91 0.8686 0.0007639 -0.2086 -0.00018345 0.66001 0.00058045 879.458824188678 884.46284096441 125.94 1.5189 125.94 125.46 126.98 0 347 61 13 0 0 0 5.3665E-05 2 75545 83.314 83.314 1 0.81618 0.70704 0 153000000 85430000 67568000 36394 276 13746 14122 57045;57046 57046 VCTLAIIDPGDSDIIR 16 0 1 Unmodified _VCTLAIIDPGDSDIIR_ 0 0 0 E5RI99;A0A024R9D3;P62888;A0A0B4J213;A0A0C4DH44 E5RI99 E5RI99 RPL30 60S ribosomal protein L30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 884.9687 2 879.458744 1756.90294 64174.57 0.38287 0.00033672 0.30302 0.00026649 0.68589 0.00060321 879.459216526139 884.463216316017 125.79 1.3826 125.79 125.33 126.72 0 331 61 10 0 0 0 0.00015117 2 74505 62.924 62.924 1 0.80321 0.70157 0 203350000 113070000 90283000 36395 276 13746 14122 57047;57048 57047 VDALMDEINFMK 12 1 0 2 Oxidation (M) _VDALM(ox)DEINFM(ox)K_ VDALM(1)DEINFM(1)K VDALM(73.5)DEINFM(73.5)K 0 2 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YIN9 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.3384 2 729.336178 1456.6578 NaN NaN NaN 0.11877 8.662E-05 NaN NaN NaN NaN 82.984 0.39901 82.984 82.816 83.215 0 0 0 0 0.00034794 1 49654 73.499 66.371 1 NaN NaN 0 7210500 7210500 0 + 36396 1162 13747 14123 57049 57049 875;876 VDALMDEINFMK 12 1 0 2 Oxidation (M) _VDALM(ox)DEINFM(ox)K_ VDALM(1)DEINFM(1)K VDALM(67.73)DEINFM(67.73)K 0 2 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YIN9 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.3375 2 729.336178 1456.6578 NaN NaN NaN 0.6511 0.00047487 NaN NaN NaN NaN 82.098 0.45683 82.098 81.859 82.315 0 0 0 0 0.00045 1 50229 67.726 51.472 1 NaN NaN 0 13134000 13134000 0 + 36397 1162 13747 14123 57050 57050 875;876 VDALNDEINFLR 12 0 1 Unmodified _VDALNDEINFLR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.8718 2 709.867348 1417.72014 71334.48 0.96315 0.00068371 0.00067484 4.7904E-07 0.96383 0.00068419 709.867345717849 714.871423382325 108.38 0.75029 108.38 107.95 108.7 0 325 57 7 0 0 0 2.978E-23 2 67495 161.17 98.041 1 0.93534 1.1038 0 247170000 129120000 118050000 + 36398 1171;1158 13748 14124 57051;57052 57052 VDALNDEINFLR 12 0 1 Unmodified _VDALNDEINFLR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.8718 2 709.867348 1417.72014 71514.67 0.8015 0.00056896 0.57884 0.0004109 1.3803 0.00097985 709.867408167749 714.871340259599 107.74 1.4332 107.74 107.39 108.82 0 421 101 11 0 0 0 4.6598E-19 2 68693 163.94 105.76 1 0.90846 1.0382 0 153230000 76416000 76814000 + 36399 1171;1158 13748 14124 57053;57054 57054 VDALNDEINFLR 12 0 1 Unmodified _VDALNDEINFLR_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.8712 2 709.867348 1417.72014 NaN NaN NaN -0.41741 -0.00029631 NaN NaN NaN NaN 119.55 0.80016 119.55 119.27 120.07 -7.6294E-06 0 0 0 4.1914E-08 1 70737 106.29 64.29 1 NaN NaN 0 21515000 0 21515000 + 36400 1171;1158 13748 14124 57055 57055 VDATEESDLAQQYGVR 16 0 1 Unmodified _VDATEESDLAQQYGVR_ 0 0 0 I3NI03;I3L3U6;B4DNP9;B4DJS0;B4DLN6;B4DUA5;H7BZ94;B4DNL5;A0A024R8S5;P07237 I3NI03 I3NI03 P4HB Protein disulfide-isomerase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.9262 2 890.921037 1779.82752 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.358 1 73.358 72.858 73.858 0 0 0 0 8.4876E-12 1 43036 109.24 82.563 1 36401 257 13749 14125 57056 57056 VDAVHADVYR 10 0 1 Unmodified _VDAVHADVYR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 385.5322 3 382.196367 1143.56727 96896.81 0.092603 3.5393E-05 -0.089875 -3.435E-05 0.0027282 1.0427E-06 382.196372768418 385.532379400843 30.497 0.98781 30.497 30.091 31.079 1.9073E-06 493 87 8 0 0 0 0.01514 3 15124 30.55 17.197 1 0.83403 0.92868 0 80040000 47391000 32649000 36402 740 13750 14126 57057;57058;57059 57059 VDAVHADVYR 10 0 1 Unmodified _VDAVHADVYR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.7911 2 572.790912 1143.56727 NaN NaN NaN 0.98733 0.00056554 NaN NaN NaN NaN 30.532 0.77888 30.532 30.179 30.958 0 0 0 0 1.5101E-07 1 14868 106.18 89.402 1 NaN NaN 0 23839000 23839000 0 36403 740 13750 14126 57060 57060 VDAVHADVYR 10 0 1 Unmodified _VDAVHADVYR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 382.1966 3 382.196367 1143.56727 96660.3 0.79673 0.00030451 -0.31045 -0.00011865 0.48627 0.00018585 382.196274840941 385.532351824845 29.73 0.854 29.73 29.511 30.365 0 392 67 9 0 0 0 0.0024706 3 14512 54.486 44.831 1 0.81805 0.93456 0 150930000 84653000 66273000 36404 740 13750 14126 57061;57062;57063 57063 VDAVHADVYR 10 0 1 Unmodified _VDAVHADVYR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.7916 2 572.790912 1143.56727 79386.13 0.45225 0.00025905 -0.15655 -8.967E-05 0.2957 0.00016938 572.790867600882 577.794817680413 34.876 0.77666 34.876 34.407 35.184 0 288 64 7 0 0 0 0.00091667 2 15389 79.148 69.754 1 1.755 1.432 0 14684000 6176000 8508000 36405 740 13750 14126 57064;57065 57064 VDAVHADVYR 10 0 1 Unmodified _VDAVHADVYR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.7911 2 572.790912 1143.56727 77862.7 0.58841 0.00033704 -0.31991 -0.00018324 0.2685 0.00015379 572.790783014623 577.794723613041 34.891 0.87047 34.891 34.435 35.306 0 302 70 7 0 0 0 0.011842 1 14915 51.445 42.029 1 1.7723 1.4476 0 12994000 4674800 8318800 36406 740 13750 14126 57066 57066 VDDDALLVFWDAR 13 0 1 Unmodified _VDDDALLVFWDAR_ 0 0 0 A0A024R667;Q96FK6;G3V4B8 A0A024R667 A0A024R667 C14orf150;WDR89 WD repeat-containing protein 89 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.881 2 767.880456 1533.74636 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.01 1 127.01 126.51 127.51 0 0 0 0 0.021825 1 84765 46.352 38.132 1 36407 198 13751 14127 57067 57067 VDDDSLGEFPVTNSR 15 0 1 Unmodified _VDDDSLGEFPVTNSR_ 0 0 0 A0A024R582;J3KMZ8;Q92785 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.8888 2 825.883923 1649.75329 67656.15 0.59415 0.0004907 -0.71567 -0.00059106 -0.12151 -0.00010036 825.88405545022 830.887759386202 80.977 0.44417 80.977 80.76 81.204 0 90 36 4 0 0 0 0.0054322 1 48166 36.847 36.24 1 1.1223 1.1777 0 11990000 6301400 5688400 36408 174 13752 14128 57068 57068 VDDDSLGEFPVTNSR 15 0 1 Unmodified _VDDDSLGEFPVTNSR_ 0 0 0 A0A024R582;J3KMZ8;Q92785 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.89 2 825.883923 1649.75329 67822.35 0.84175 0.00069519 -0.71344 -0.00058922 0.12831 0.00010597 825.883072528196 830.887429239187 80.185 0.32382 80.185 80.004 80.328 0 70 24 4 0 0 0 0.00021022 4 48782 75.819 70.506 1 0.92975 0.93755 0 10490000 5693200 4796600 36409 174 13752 14128 57069;57070;57071;57072 57071 VDDLLIIEEK 10 1 0 Unmodified _VDDLLIIEEK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.8401 2 593.831911 1185.64927 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.986 1 94.986 94.486 95.486 0 0 0 0 0.044119 1 59101 45.598 24.298 1 36410 1729 13753 14129 57073 57073 VDEAIALFQK 10 1 0 Unmodified _VDEAIALFQK_ 0 0 0 A0A024RCN6;P26640;A0A140T936;B4DT32 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 571.3207 2 567.313689 1132.61282 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.639 1 87.639 87.139 88.139 -7.6294E-06 0 0 0 0.025757 1 52876 51.949 35.751 1 36411 363 13754 14130 57074 57074 VDEAVAVLQAHQAK 14 1 0 Unmodified _VDEAVAVLQAHQAK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YAS7;H0YAS6;H0YB75;H0YC10;L0R533 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3;RLIM Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 743.9092 2 739.901722 1477.78889 71788.7 0.76911 0.00056906 -0.42888 -0.00031733 0.34023 0.00025174 739.901735266423 743.908291180015 50.781 0.21796 50.781 50.637 50.855 0 45 19 4 0 0 0 0.00017076 3 28093 73.499 73.499 1 2.4522 2.5476 0 12479000 4292700 8186100 36412 273 13755 14131 57075;57076;57077 57077 VDEAVAVLQAHQAK 14 1 0 Unmodified _VDEAVAVLQAHQAK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YAS7;H0YAS6;H0YB75;H0YC10;L0R533 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3;RLIM Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.9107 2 739.901722 1477.78889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.528 1 49.528 49.028 50.028 0 0 0 0 0.0015068 1 27870 72.321 57.86 1 36413 273 13755 14131 57078 57078 VDEAVAVLQAHQAK 14 1 0 Unmodified _VDEAVAVLQAHQAK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YAS7;H0YAS6;H0YB75;H0YC10;L0R533 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3;RLIM Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.9011 2 739.901722 1477.78889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.561 1 49.561 49.061 50.061 0 0 0 0 0.03312 1 27896 42.718 27.745 1 36414 273 13755 14131 57079 57079 VDEAVAVLQAHQAK 14 1 0 Unmodified _VDEAVAVLQAHQAK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;Q5VX58;Q3ZCS4;Q9H361;Q2VIP3;H0YAS7;H0YAS6;H0YB75;H0YC10;L0R533 A0A087WTT1 A0A087WTT1 PABPC1;PABPC3;RLIM Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.9091 2 739.901722 1477.78889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.571 1 49.571 49.071 50.071 -3.8147E-06 0 0 0 0.00086907 1 27902 78.655 64.236 1 36415 273 13755 14131 57080 57080 VDEFPLCGHMVSDEYEQLSSEALEAAR 27 0 1 Oxidation (M) _VDEFPLCGHM(ox)VSDEYEQLSSEALEAAR_ VDEFPLCGHM(1)VSDEYEQLSSEALEAAR VDEFPLCGHM(84.93)VSDEYEQLSSEALEAAR 0 1 0 X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1037.1326 3 1033.4621 3097.36448 59564.9 0.40316 0.00041665 -0.42147 -0.00043557 -0.018304 -1.8916E-05 1033.79634519995 1037.13233070183 114.49 0.62327 114.49 114.19 114.81 0 458 43 14 0 0 0 9.4525E-20 1 72604 84.933 84.933 1 1.1362 1.3389 0 239910000 111440000 128470000 36416 1524 13756 14132 57081 57081 1288 VDEFPLCGHMVSDEYEQLSSEALEAAR 27 0 1 Oxidation (M) _VDEFPLCGHM(ox)VSDEYEQLSSEALEAAR_ VDEFPLCGHM(1)VSDEYEQLSSEALEAAR VDEFPLCGHM(84.32)VSDEYEQLSSEALEAAR 0 1 0 X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1034.1302 3 1033.4621 3097.36448 59625.48 0.38144 0.0003942 -0.40118 -0.0004146 -0.019739 -2.0399E-05 1033.79637881569 1037.13232679662 113.99 0.78419 113.99 113.64 114.42 -7.6294E-06 568 56 14 0 0 0 1.1772E-19 2 73905 84.318 84.318 1 1.1599 1.333 0 198210000 97546000 100660000 36417 1524 13756 14132 57082;57083 57082 1288 VDEFPLCGHMVSDEYEQLSSEALEAAR 27 0 1 Oxidation (M) _VDEFPLCGHM(ox)VSDEYEQLSSEALEAAR_ VDEFPLCGHM(1)VSDEYEQLSSEALEAAR VDEFPLCGHM(67.33)VSDEYEQLSSEALEAAR 0 1 0 X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1037.1334 3 1033.4621 3097.36448 59109.55 0.66973 0.00069214 -0.26383 -0.00027266 0.4059 0.00041948 1033.79660624907 1037.13236427092 125.85 0.93008 125.85 125.49 126.42 0 443 38 16 0 0 0 4.698E-16 2 75505 67.33 67.33 1 0.73262 0.63405 0 131410000 75653000 55758000 36418 1524 13756 14132 57084;57085 57085 1288 VDEFPLCGHMVSDEYEQLSSEALEAAR 27 0 1 Oxidation (M) _VDEFPLCGHM(ox)VSDEYEQLSSEALEAAR_ VDEFPLCGHM(1)VSDEYEQLSSEALEAAR VDEFPLCGHM(45.86)VSDEYEQLSSEALEAAR 0 1 0 X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1033.7979 3 1033.4621 3097.36448 59320.76 0.50025 0.00051699 -0.3115 -0.00032192 0.18875 0.00019507 1034.13052136155 1037.13227231793 125.79 1.1277 125.79 125.38 126.51 0 444 51 15 0 0 0 4.2798E-07 1 74469 45.862 45.862 1 0.73904 0.64525 0 125800000 70696000 55103000 36419 1524 13756 14132 57086 57086 1288 VDEFPLCGHMVSDEYEQLSSEALEAAR 27 0 1 Unmodified _VDEFPLCGHMVSDEYEQLSSEALEAAR_ 0 0 0 X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1031.4669 3 1028.13047 3081.36957 59653.66 0.59061 0.00060722 -0.51994 -0.00053456 0.070671 7.2659E-05 1028.79865816846 1031.80059657773 131.84 0.59645 131.84 131.61 132.21 0 247 27 14 0 0 0 1.639E-06 2 79991 37.934 37.934 1 1.1103 0.95462 0 45464000 21087000 24377000 36420 1524 13756 14133 57087;57088 57087 VDEFPLCGHMVSDEYEQLSSEALEAAR 27 0 1 Unmodified _VDEFPLCGHMVSDEYEQLSSEALEAAR_ 0 0 0 X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 X1WI28 X1WI28 RPL10 60S ribosomal protein L10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1028.4639 3 1028.13047 3081.36957 59936.76 0.74559 0.00076657 1.477 0.0015186 2.2226 0.0022852 1028.46663273591 1031.80260087366 131.61 0.52164 131.61 131.41 131.93 0 149 18 11 0 0 0 1.7906E-66 2 78998 151.47 145.98 1 1.2041 1.0513 0 134090000 58899000 75192000 36421 1524 13756 14133 57089;57090 57089 VDEFVTHNLSFDEINK 16 1 0 Unmodified _VDEFVTHNLSFDEINK_ 0 0 0 Q6IRT1;Q6FI45;P11766;Q5U043 Q6IRT1 Q6IRT1 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.316 3 636.310896 1905.91086 NaN NaN NaN 0.012524 7.969E-06 NaN NaN NaN NaN 90.292 0.16518 90.292 90.201 90.366 0 0 0 0 0.0042877 1 54541 43.37 32.735 1 NaN NaN 0 8632500 0 8632500 36422 1472 13757 14134 57091 57091 VDEFVTHNLSFDEINK 16 1 0 Unmodified _VDEFVTHNLSFDEINK_ 0 0 0 Q6IRT1;Q6FI45;P11766;Q5U043 Q6IRT1 Q6IRT1 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.9823 3 636.310896 1905.91086 NaN NaN NaN 0.14201 9.0364E-05 NaN NaN NaN NaN 90.546 0.62805 90.546 90.344 90.972 0 0 0 0 0.014384 1 54643 35.098 29.117 1 NaN NaN 0 18406000 0 18406000 36423 1472 13757 14134 57092 57092 VDEFVTHNLSFDEINK 16 1 0 Unmodified _VDEFVTHNLSFDEINK_ 0 0 0 Q6IRT1;Q6FI45;P11766;Q5U043 Q6IRT1 Q6IRT1 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.9847 3 636.310896 1905.91086 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.364 1 89.364 88.864 89.864 0 0 0 0 0.025314 1 55168 47.223 41.242 1 36424 1472 13757 14134 57093 57093 VDEFVTHNLSFDEINK 16 1 0 Unmodified _VDEFVTHNLSFDEINK_ 0 0 0 Q6IRT1;Q6FI45;P11766;Q5U043 Q6IRT1 Q6IRT1 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.6718 3 636.310896 1905.91086 78349.37 0.63928 0.00040678 -0.064346 -4.0944E-05 0.57493 0.00036584 636.644263114708 638.982741555908 89.561 0.6485 89.561 89.207 89.856 0 93 52 4 0 0 0 0.029352 1 55396 32.191 32.191 1 3.393 3.3869 0 14634000 4171400 10463000 36425 1472 13757 14134 57094 57094 VDEIFGQLR 9 0 1 Unmodified _VDEIFGQLR_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.7908 2 538.790381 1075.56621 81265.88 0.89231 0.00048077 0.13403 7.2214E-05 1.0263 0.00055298 538.79039746689 543.794493242973 82.843 1.074 82.843 82.454 83.527 0 400 89 7 0 0 0 0.00063538 2 49431 96.492 72.536 1 0.79223 0.92475 0 197300000 109910000 87386000 36426 387 13758 14135 57095;57096 57096 VDEIFGQLR 9 0 1 Unmodified _VDEIFGQLR_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.7906 2 538.790381 1075.56621 81189.56 0.79487 0.00042827 -0.0062694 -3.3779E-06 0.7886 0.00042489 538.790269155022 543.794421199358 81.859 1.0032 81.859 81.39 82.393 0 398 87 7 0 0 0 0.00049492 2 49870 98.458 73.639 1 0.81322 0.93601 0 212480000 116780000 95703000 36427 387 13758 14135 57097;57098 57098 VDEIFGQLR 9 0 1 Unmodified _VDEIFGQLR_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.7903 2 538.790381 1075.56621 80775.02 0.67113 0.0003616 -0.24088 -0.00012978 0.43025 0.00023182 538.790240894903 543.794277612852 94.39 0.931 94.39 94.039 94.97 7.6294E-06 244 60 7 0 0 0 0.010479 2 52732 59.245 50.713 1 0.50502 0.41367 0 12953000 8472500 4480400 36428 387 13758 14135 57099;57100 57099 VDEIFGQLR 9 0 1 Unmodified _VDEIFGQLR_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.7946 2 538.790381 1075.56621 81358.41 0.67975 0.00036624 -0.0033718 -1.8167E-06 0.67637 0.00036442 538.790363005976 543.794443486119 94.35 0.91169 94.35 93.968 94.88 0 251 56 7 0 0 0 0.0043738 2 51949 69.423 59.158 1 0.48776 0.39367 0 10910000 7456600 3453400 36429 387 13758 14135 57101;57102 57102 VDENFDCVEADDVEGK 16 1 0 Unmodified _VDENFDCVEADDVEGK_ 0 0 0 O14929 O14929 O14929 HAT1 Histone acetyltransferase type B catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.3904 2 920.88072 1839.74689 NaN NaN NaN -0.23257 -0.00021417 NaN NaN NaN NaN 67.986 0.37468 67.986 67.759 68.133 0 0 0 0 0.00017916 1 39271 72.705 67.426 1 NaN NaN 0 5381600 0 5381600 36430 1368 13759 14136 57103 57103 VDENFDCVEADDVEGK 16 1 0 Unmodified _VDENFDCVEADDVEGK_ 0 0 0 O14929 O14929 O14929 HAT1 Histone acetyltransferase type B catalytic subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 924.887 2 920.88072 1839.74689 NaN NaN NaN -0.077668 -7.1523E-05 NaN NaN NaN NaN 67.025 0.34329 67.025 66.95 67.293 0 0 0 0 7.9959E-05 1 39653 77.078 73.855 1 NaN NaN 0 3841900 0 3841900 36431 1368 13759 14136 57104 57104 VDENGPELLPR 11 0 1 Unmodified _VDENGPELLPR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.8275 2 619.822409 1237.63027 NaN NaN NaN 1.1362 0.00070422 NaN NaN NaN NaN 77.677 0.55274 77.677 77.431 77.984 0 0 0 0 0.017926 1 40847 53.751 31.011 1 NaN NaN 0 738870 0 738870 36432 1205 13760 14137 57105 57105 VDEVGGEALGR 11 0 1 Unmodified _VDEVGGEALGR_ 0 0 0 CON__Q3SX09;CON__P02070 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.2804 2 551.280377 1100.5462 NaN NaN NaN 0.085438 4.71E-05 NaN NaN NaN NaN 37.925 0.56391 37.925 37.615 38.179 0 0 0 0 0.00069851 1 19664 88.681 67.233 1 NaN NaN 0 213790000 213790000 0 + 36433 1172 13761 14138 57106 57106 VDEVPDGAVKPPTNK 15 2 0 Unmodified _VDEVPDGAVKPPTNK_ 0 0 1 O75475;Q05CM9;Q8N4N4 O75475;Q8N4N4 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.4133 2 783.41212 1564.80969 69324.64 0.54794 0.00042926 0.22943 0.00017974 0.77737 0.000609 783.412177207413 791.426339315896 40.123 0.6692 40.123 39.73 40.399 0 235 55 7 0 0 0 0.01662 2 20716 43.084 39.321 1 0.7066 0.83421 0 50042000 27846000 22196000 36434 1405;1908 13762 14139 57107;57108 57107 VDEVPDGAVKPPTNK 15 2 0 Unmodified _VDEVPDGAVKPPTNK_ 0 0 1 O75475;Q05CM9;Q8N4N4 O75475;Q8N4N4 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.611 3 522.610505 1564.80969 82703.7 0.35017 0.000183 -0.022778 -1.1904E-05 0.32739 0.0001711 522.610434374326 527.953269834234 40.137 0.88649 40.137 39.647 40.533 0 495 74 10 0 0 0 0.00078953 2 20723 43.69 38.335 1 0.68505 0.80831 0 161160000 98556000 62606000 36435 1405;1908 13762 14139 57109;57110 57109 VDEVPDGAVKPPTNK 15 2 0 Unmodified _VDEVPDGAVKPPTNK_ 0 0 1 O75475;Q05CM9;Q8N4N4 O75475;Q8N4N4 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.9529 3 522.610505 1564.80969 82791.33 0.35469 0.00018537 -0.077652 -4.0582E-05 0.27704 0.00014478 522.610416629568 527.953242283288 39.083 0.8454 39.083 38.673 39.519 0 466 73 9 0 0 0 0.00010183 2 20462 61.732 52.911 1 0.6646 0.77315 0 165130000 98164000 66968000 36436 1405;1908 13762 14139 57111;57112 57111 VDEVPDGAVKPPTNK 15 2 0 Unmodified _VDEVPDGAVKPPTNK_ 0 0 1 O75475;Q05CM9;Q8N4N4 O75475;Q8N4N4 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.4268 2 783.41212 1564.80969 69302.49 0.6311 0.00049441 0.039304 3.0791E-05 0.6704 0.0005252 783.411919381748 791.426282711254 39.105 0.57148 39.105 38.807 39.379 0 228 48 7 0 0 0 0.001417 1 20482 61.235 38.594 1 0.67778 0.78555 0 64901000 39483000 25418000 36437 1405;1908 13762 14139 57113 57113 VDEVPDGAVKPPTNK 15 2 0 Unmodified _VDEVPDGAVKPPTNK_ 0 0 1 O75475;Q05CM9;Q8N4N4 O75475;Q8N4N4 O75475 PSIP1 PC4 and SFRS1-interacting protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.4133 2 783.41212 1564.80969 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.86 1 38.86 38.36 39.36 3.8147E-06 0 0 0 0.022791 1 20480 51.841 36.269 1 36438 1405;1908 13762 14139 57114 57114 VDEVPDGAVKPPTNK 15 2 0 Unmodified _VDEVPDGAVKPPTNK_ 0 0 1 O75475;Q05CM9;Q8N4N4 O75475;Q8N4N4 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.6108 3 522.610505 1564.80969 81624.5 0.12184 6.3673E-05 0.012512 6.5391E-06 0.13435 7.0212E-05 522.610580668813 527.953242677571 46.392 1.0627 46.392 45.822 46.885 0 486 72 9 0 0 0 0.00024621 1 22234 53.403 53.403 1 1.275 1.0848 0 30188000 14043000 16145000 36439 1405;1908 13762 14139 57115 57115 VDEVPDGAVKPPTNK 15 2 0 Unmodified _VDEVPDGAVKPPTNK_ 0 0 1 O75475;Q05CM9;Q8N4N4 O75475;Q8N4N4 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.6108 3 522.610505 1564.80969 82480.02 0.018943 9.8998E-06 0.10538 5.5075E-05 0.12433 6.4975E-05 522.610615138985 527.953323403718 46.625 1.1882 46.625 46.04 47.228 0 492 80 9 0 0 0 0.00010234 2 21810 52.254 52.254 1 1.2325 1.0462 0 23995000 10831000 13164000 36440 1405;1908 13762 14139 57116;57117 57117 VDEVPDGAVKPPTNK 15 2 0 Unmodified _VDEVPDGAVKPPTNK_ 0 0 1 O75475;Q05CM9;Q8N4N4 O75475;Q8N4N4 O75475 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.4255 2 783.41212 1564.80969 69019.77 0.30602 0.00023974 -0.18757 -0.00014695 0.11845 9.2796E-05 783.412328214067 791.425750906297 46.647 0.9583 46.647 46.116 47.075 0 316 60 8 0 0 0 0.0033599 1 21912 53.528 43.523 1 1.2504 1.0661 0 5094100 2431300 2662800 36441 1405;1908 13762 14139 57118 57118 VDFADTEHR 9 0 1 Unmodified _VDFADTEHR_ 0 0 0 A0A087WWP4;Q96T37 A0A087WWP4 A0A087WWP4 RBM15 Putative RNA-binding protein 15 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.2562 2 545.25162 1088.48869 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.677 1 24.677 24.177 25.177 -1.9073E-06 0 0 0 0.051287 1 10394 46.158 22.73 1 36442 427 13763 14140 57119 57119 VDFPTAIGMVVER 13 0 1 Oxidation (M) _VDFPTAIGM(ox)VVER_ VDFPTAIGM(1)VVER VDFPTAIGM(67.38)VVER 0 1 0 Q6FI97;Q53FS0;O96019;H7C5S0 Q6FI97 Q6FI97 BAF53A;ACTL6A Actin-like protein 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.3739 2 725.373952 1448.73335 69553.3 0.79686 0.00057802 -1.1942 -0.00086623 -0.39732 -0.0002882 725.373700582601 730.377172026274 105.95 1.1052 105.95 105.35 106.45 0 326 80 7 0 0 0 0.00012796 1 67468 67.385 56.627 1 1.0962 1.2605 0 76219000 35280000 40939000 36443 1434 13764 14141 57120 57120 1132 VDFSITK 7 1 0 Unmodified _VDFSITK_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4;H7BXF3 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 409.2311 2 405.223811 808.433069 NaN NaN NaN 0.20865 8.4548E-05 NaN NaN NaN NaN 57.083 0.98253 57.083 56.55 57.532 0 0 0 0 0.041222 1 32053 62.659 7.2175 1 NaN NaN 0 36992000 0 36992000 36444 889 13765 14142 57121 57121 VDFSITK 7 1 0 Unmodified _VDFSITK_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4;H7BXF3 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 409.2311 2 405.223811 808.433069 93681.62 -0.088481 -3.5855E-05 0.11344 4.5967E-05 0.024954 1.0112E-05 405.223732720332 409.230870174013 56.039 0.97616 56.039 55.523 56.499 3.8147E-06 391 75 8 0 0 0 0.02738 1 32029 73.616 10.902 1 1.1542 1.2966 0 117160000 56772000 60392000 36445 889 13765 14142 57122 57122 VDFSPQPPYNYAVTASSR 18 0 1 Unmodified _VDFSPQPPYNYAVTASSR_ 0 0 0 Q8TED0;H0Y8P4;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1000.4836 2 999.981429 1997.94831 60461.54 0.69626 0.00069625 0.45299 0.00045298 1.1492 0.0011492 999.981871939031 1004.98588310923 93.327 1.0259 93.327 92.786 93.812 0 493 85 8 0 0 0 1.2746E-09 4 56627 99.927 99.927 1 0.67699 0.75336 0 77900000 51409000 26491000 36446 1936 13766 14143 57123;57124;57125;57126 57126 VDFSPQPPYNYAVTASSR 18 0 1 Unmodified _VDFSPQPPYNYAVTASSR_ 0 0 0 Q8TED0;H0Y8P4;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 999.9827 2 999.981429 1997.94831 60545.17 0.48339 0.00048338 0.47881 0.0004788 0.9622 0.00096218 1000.48365368187 1005.48715963123 92.575 0.99058 92.575 92.106 93.096 7.6294E-06 491 82 8 0 0 0 2.4302E-22 4 57197 131.35 123.25 1 0.74372 0.8457 0 119860000 65187000 54674000 36447 1936 13766 14143 57127;57128;57129;57130 57128 VDFSPQPPYNYAVTASSR 18 0 1 Unmodified _VDFSPQPPYNYAVTASSR_ 0 0 0 Q8TED0;H0Y8P4;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1000.4833 2 999.981429 1997.94831 60393.67 0.35512 0.00035512 0.26886 0.00026886 0.62399 0.00062398 1000.48301051665 1004.9860351051 106.47 0.96454 106.47 105.91 106.87 0 345 52 9 0 0 0 0.00063668 2 60673 42.682 42.682 1 1.2059 1.0189 0 29947000 14154000 15793000 36448 1936 13766 14143 57131;57132 57132 VDFSPQPPYNYAVTASSR 18 0 1 Unmodified _VDFSPQPPYNYAVTASSR_ 0 0 0 Q8TED0;H0Y8P4;D6RF65 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1000.4835 2 999.981429 1997.94831 60523.5 0.27611 0.0002761 0.23257 0.00023257 0.50868 0.00050867 1000.48295237202 1004.98584848603 106.34 1.0535 106.34 105.74 106.8 0 410 64 9 0 0 0 2.5163E-05 2 59709 69.456 67.623 1 1.1888 1.0369 0 34424000 17320000 17104000 36449 1936 13766 14143 57133;57134 57133 VDFTEEEINNMK 12 1 0 Oxidation (M) _VDFTEEEINNM(ox)K_ VDFTEEEINNM(1)K VDFTEEEINNM(78.93)K 0 1 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;Q6P1N4;H0YKA5;Q5FWG8;Q05DN7 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.8401 2 742.832314 1483.65007 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.38 1 55.38 54.88 55.88 3.8147E-06 0 0 0 0.00025088 1 31130 78.932 54.056 1 36450 352 13767 14144 57135 57135 261 VDGAEWGVDLPSVEAQLGSHR 21 0 1 Unmodified _VDGAEWGVDLPSVEAQLGSHR_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 745.0356 3 741.366063 2221.07636 NaN NaN NaN -0.58335 -0.00043247 NaN NaN NaN NaN 108.46 0.35394 108.46 108.28 108.63 7.6294E-06 0 0 0 6.6777E-09 2 69357 71.535 60.235 1 NaN NaN 0 4014500 0 4014500 36451 1754 13768 14145 57136;57137 57136 VDIAPHVR 8 0 1 Unmodified _VDIAPHVR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 306.1797 3 302.843376 905.5083 111502.6 0.21352 6.4664E-05 -0.050537 -1.5305E-05 0.16298 4.9359E-05 302.843228635245 306.179401667317 31.975 0.62867 31.975 31.771 32.4 -1.9073E-06 139 59 4 0 0 0 0.032598 1 15793 27.254 14.217 1 1.9211 2.0163 0 11104000 3483300 7621200 36452 1205 13769 14146 57138 57138 VDIETPNLEGTLTGPR 16 0 1 Unmodified _VDIETPNLEGTLTGPR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 861.4517 2 856.446691 1710.87883 65773.16 0.82638 0.00070775 0.33607 0.00028782 1.1624 0.00099558 856.446315065588 861.450865027755 100.67 0.53511 100.67 100.38 100.91 0 98 33 5 0 0 0 0.00011388 2 61798 103.44 95.711 1 1.6877 1.7659 0 12855000 5461500 7393100 36453 1696 13770 14147 57139;57140 57140 VDIETPNLEGTLTGPR 16 0 1 Unmodified _VDIETPNLEGTLTGPR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.4531 2 856.446691 1710.87883 65387.38 0.75169 0.00064378 0.53499 0.00045819 1.2867 0.001102 856.447341775221 861.451509313312 100.07 0.48042 100.07 99.807 100.29 0 123 38 5 0 0 0 0.0017138 3 62915 48.659 41.401 1 1.4423 1.4279 0 15474000 6545600 8928500 36454 1696 13770 14147 57141;57142;57143 57143 VDIGDTIIYLVH 12 0 0 Unmodified _VDIGDTIIYLVH_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;B3KXA9 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3727 2 679.371735 1356.72892 NaN NaN NaN -0.19415 -0.0001319 NaN NaN NaN NaN 127.52 1.0071 127.52 126.88 127.89 0 0 0 0 2.717E-20 1 82974 140.09 125.42 1 36455 883 13771 14148 57144 57144 VDIGDTIIYLVH 12 0 0 Unmodified _VDIGDTIIYLVH_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;B3KXA9 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3724 2 679.371735 1356.72892 NaN NaN NaN 0.027374 1.8597E-05 NaN NaN NaN NaN 127.15 0.744 127.15 126.84 127.58 0 0 0 0 9.4649E-14 1 84768 128.69 117.86 1 36456 883 13771 14148 57145 57145 VDIIADAAYSIFQK 14 1 0 Unmodified _VDIIADAAYSIFQK_ 0 0 0 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.9205 2 777.414131 1552.81371 69352.4 0.85452 0.00066432 -1.1623 -0.00090357 -0.30775 -0.00023925 777.414407000915 781.920578019427 123.55 0.60825 123.55 123.19 123.8 0 181 45 7 0 0 0 0.00013888 2 80063 78.653 78.653 1 2.972 3.029 0 10395000 1965400 8429500 36457 70 13772 14149 57146;57147 57146 VDILDAAVQTK 11 1 0 Unmodified _VDILDAAVQTK_ 0 0 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.8297 2 586.829703 1171.64485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.074 1 84.074 83.574 84.574 0 0 0 0 0.015839 1 50350 55.401 24.327 1 36458 1833 13773 14150 57148 57148 VDILDPALLR 10 0 1 Unmodified _VDILDPALLR_ 0 0 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.8413 2 562.837331 1123.66011 81779.82 0.88708 0.00049928 -0.084382 -4.7493E-05 0.8027 0.00045179 562.837222104918 567.841334844782 112.83 0.5885 112.83 112.56 113.15 0 214 42 7 0 0 0 0.0079558 2 71177 56.729 56.729 1 2.4594 2.5345 0 24501000 6653500 17848000 36459 617 13774 14151 57149;57150 57149 VDILDPALLR 10 0 1 Unmodified _VDILDPALLR_ 0 0 0 E9PM69;R4GNH3;A0A140VK42;P17980;A8K781;E9PKD5 E9PM69 E9PM69 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.842 2 562.837331 1123.66011 81439.82 0.93684 0.00052729 -0.38495 -0.00021666 0.55189 0.00031062 562.837076526175 567.841147263909 112.22 0.52297 112.22 111.96 112.49 -7.6294E-06 213 39 7 0 0 0 0.0035438 1 72444 64.04 57.305 1 2.3593 2.5712 0 29379000 8445200 20934000 36460 617 13774 14151 57151 57151 VDILYNNIK 9 1 0 Unmodified _VDILYNNIK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.3156 2 546.308406 1090.60226 82341.7 0.39101 0.00021361 0.15613 8.5293E-05 0.54713 0.0002989 546.308275931857 550.315336383663 74.611 1.3915 74.611 73.976 75.368 0 594 115 9 0 0 0 7.9139E-05 1 43754 110.81 86.777 1 0.69901 0.80686 0 220190000 129870000 90323000 36461 2148 13775 14152 57152 57152 VDILYNNIK 9 1 0 Unmodified _VDILYNNIK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.3087 2 546.308406 1090.60226 82455.14 0.39108 0.00021365 0.14952 8.1683E-05 0.5406 0.00029533 546.308343636992 550.315363164526 73.47 1.5043 73.47 72.799 74.303 0 610 125 9 0 0 0 0.00045646 2 44035 98.997 71.693 1 0.72236 0.84817 0 345970000 210960000 135010000 36462 2148 13775 14152 57153;57154 57154 VDILYNNIK 9 1 0 Unmodified _VDILYNNIK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.3154 2 546.308406 1090.60226 81907.1 0.51406 0.00028083 -0.07447 -4.0684E-05 0.43959 0.00024015 546.308201162406 550.315331779818 85.06 1.4368 85.06 84.584 86.021 7.6294E-06 419 94 7 0 0 0 0.0025185 1 46517 74.127 53.257 1 0.92695 0.7606 0 37225000 19803000 17423000 36463 2148 13775 14152 57155 57155 VDINTEDLEDGTCR 14 0 1 Unmodified _VDINTEDLEDGTCR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5C6;Q2VP91 P21333 P21333 FLNA;FLJ00119 Filamin-A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.8591 2 818.859591 1635.70463 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.679 1 66.679 66.179 67.179 0 0 0 0 0.010708 1 38487 51.013 43.364 1 36464 1504 13776 14153 57156 57156 VDIRPQLLK 9 1 1 Unmodified _VDIRPQLLK_ 0 0 1 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.3406 2 541.340041 1080.66553 81580.38 0.52194 0.00028255 -0.055144 -2.9852E-05 0.4668 0.0002527 541.339951808493 550.351175745872 62.196 0.97337 62.196 61.79 62.763 3.8147E-06 404 90 6 0 0 0 0.006966 1 36446 87.308 35.453 1 0.74453 0.87422 0 60336000 34695000 25640000 36465 1817 13777 14154 57157 57157 VDLASETSSR 10 0 1 Unmodified _VDLASETSSR_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.7648 2 532.76456 1063.51457 80570.27 0.84109 0.0004481 -0.72794 -0.00038782 0.11315 6.0284E-05 532.764395156086 537.76791957553 28.637 0.38039 28.637 28.469 28.85 0 84 21 5 0 0 0 0.00018094 3 13592 94.692 72.419 1 0.87644 0.89657 0 34274000 16630000 17644000 36466 1566 13778 14155 57158;57159;57160 57160 VDLASETSSR 10 0 1 Unmodified _VDLASETSSR_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.7684 2 532.76456 1063.51457 79726.69 0.45897 0.00024452 -1.2036 -0.00064123 -0.74462 -0.00039671 532.764515586748 537.768061947861 28.06 0.33222 28.06 27.871 28.203 1.9073E-06 91 18 7 0 0 0 0.00095338 1 13192 78.556 62.924 1 0.89859 0.98913 0 40973000 20871000 20102000 36467 1566 13778 14155 57161 57161 VDLASETSSR 10 0 1 Unmodified _VDLASETSSR_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 537.7687 2 532.76456 1063.51457 83159.01 0.23378 0.00012455 -0.34058 -0.00018145 -0.1068 -5.6901E-05 532.764373964869 537.768462680983 32.411 0.40355 32.411 32.212 32.616 0 70 18 6 0 0 0 0.0037244 2 13993 63.216 46.536 1 0.83917 0.72684 0 2557700 1362100 1195600 36468 1566 13778 14155 57162;57163 57163 VDLASETSSR 10 0 1 Unmodified _VDLASETSSR_ 0 0 0 P42696;A2A2V2 P42696 P42696 RBM34 RNA-binding protein 34 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.7689 2 532.76456 1063.51457 82371.38 0.45696 0.00024345 -0.48224 -0.00025692 -0.025279 -1.3468E-05 532.764193749402 537.768439459222 32.556 0.47617 32.556 32.345 32.821 0 84 22 5 0 0 0 0.022046 2 13572 46.001 44.318 1 0.85879 0.75232 0 1841800 933270 908530 36469 1566 13778 14155 57164;57165 57165 VDLEELIECATGK 13 1 0 Unmodified _VDLEELIECATGK_ 0 0 0 B2RDX0;A8K7Z9;A0A024R6R1;Q8NEM2 B2RDX0 B2RDX0 SHCBP1 SHC SH2 domain-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.8751 2 738.866157 1475.71776 NaN NaN NaN 0.25517 0.00018854 NaN NaN NaN NaN 125.62 0.21593 125.62 125.44 125.66 0 0 0 0 0.027768 1 83682 43.897 36.516 1 NaN NaN 0 1478100 0 1478100 36470 207 13779 14156 57166 57166 VDLGGFAGLFDLK 13 1 0 Unmodified _VDLGGFAGLFDLK_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93;O14660;Q71VH3 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.3665 2 676.366453 1350.71835 74559.11 0.80346 0.00054343 0.23224 0.00015708 1.0357 0.00070051 676.366459303161 680.37362522135 132.71 0.81825 132.71 132.37 133.19 0 217 42 7 0 0 0 0.00010772 2 86831 91.937 81.108 1 2.7975 2.9374 0 16535000 3679400 12855000 36471 1507 13780 14157 57167;57168 57168 VDLGGFAGLFDLK 13 1 0 Unmodified _VDLGGFAGLFDLK_ 0 0 0 Q3B7A7;Q59HH3;P22102;B4DJ93;O14660;Q71VH3 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.3746 2 676.366453 1350.71835 74645.22 0.91084 0.00061606 0.077599 5.2486E-05 0.98844 0.00066855 676.366432151176 680.373459988691 132.31 0.87347 132.31 131.95 132.82 0 262 52 8 0 0 0 1.4601E-06 2 88482 110.86 100.03 1 2.797 2.9818 0 23206000 5074600 18131000 36472 1507 13780 14157 57169;57170 57169 VDLGLPEK 8 1 0 Unmodified _VDLGLPEK_ 0 0 0 Q1ED39;H3BMC9 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 439.7581 2 435.750193 869.485833 93545.71 0.079983 3.4853E-05 -0.045277 -1.973E-05 0.034706 1.5123E-05 435.749971204759 439.757313658647 63.698 0.66988 63.698 63.431 64.101 0 187 65 4 0 0 0 0.043467 1 36552 46.129 26.492 1 1.0296 1.059 0 14520000 6859100 7661300 36473 1775 13781 14158 57171 57171 VDLILENTSK 10 1 0 Unmodified _VDLILENTSK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.3238 2 566.316428 1130.6183 84116.48 0.55915 0.00031666 -0.86906 -0.00049216 -0.30991 -0.00017551 566.315806242959 570.322870513169 71.471 0.67944 71.471 71.149 71.828 0 210 53 6 0 0 0 0.0028777 1 41718 67.081 57.742 1 0.73678 0.74699 0 27713000 15786000 11926000 36474 1068 13782 14159 57172 57172 VDLILENTSK 10 1 0 Unmodified _VDLILENTSK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.316 2 566.316428 1130.6183 82180.08 0.51592 0.00029217 -0.81776 -0.00046311 -0.30184 -0.00017094 566.315752352738 570.323234247625 70.171 0.54668 70.171 69.964 70.51 0 215 45 6 0 0 0 0.014443 2 41955 49.06 40.596 1 0.83272 0.92332 0 47631000 27847000 19784000 36475 1068 13782 14159 57173;57174 57174 VDLILENTSK 10 1 0 Unmodified _VDLILENTSK_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DND9;B4DVK1;B4E013;M0QX73 Q7L4X7 Q7L4X7 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.3237 2 566.316428 1130.6183 82217.58 0.51445 0.00029134 -0.82899 -0.00046947 -0.31454 -0.00017813 566.315604202851 570.323228692363 81.244 0.96133 81.244 80.859 81.821 -7.6294E-06 178 53 6 0 0 0 0.040524 1 43966 38.567 30.035 1 1.0982 0.87088 0 4406700 2806300 1600400 36476 1068 13782 14159 57175 57175 VDLLGEFQSALPK 13 1 0 Unmodified _VDLLGEFQSALPK_ 0 0 0 Q9H9L3 Q9H9L3 Q9H9L3 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.8984 2 708.890292 1415.76603 NaN NaN NaN -0.35415 -0.00025105 NaN NaN NaN NaN 134.47 0.18753 134.47 134.37 134.56 0 0 0 0 0.0053103 1 82104 58.172 41.147 1 NaN NaN 0 5757200 0 5757200 36477 2046 13783 14160 57176 57176 VDLLNQEIEFLK 12 1 0 Unmodified _VDLLNQEIEFLK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.9047 2 730.903399 1459.79225 NaN NaN NaN 0.26029 0.00019025 NaN NaN NaN NaN 119.69 0.88644 119.69 119.41 120.3 0 0 0 0 4.0583E-13 1 76891 137.17 111.1 1 NaN NaN 0 115890000 115890000 0 + 36478 1166 13784 14161 57177 57177 VDLLNQEIEFLK 12 1 0 Unmodified _VDLLNQEIEFLK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.9043 2 730.903399 1459.79225 NaN NaN NaN 0.25246 0.00018453 NaN NaN NaN NaN 119.22 0.96521 119.22 118.77 119.73 0 0 0 0 1.1332E-20 1 78487 152.54 123.84 1 NaN NaN 0 169370000 169370000 0 + 36479 1166 13784 14161 57178 57178 VDLLNQEIEFLK 12 1 0 Unmodified _VDLLNQEIEFLK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 731.4061 2 730.903399 1459.79225 NaN NaN NaN -0.036495 -2.6674E-05 NaN NaN NaN NaN 132.02 1.2115 132.02 131.68 132.89 0 0 0 0 2.9936E-05 1 80071 115.57 99.376 1 NaN NaN 0 55567000 55567000 0 + 36480 1166 13784 14161 57179 57179 VDLLNQEIEFLK 12 1 0 Unmodified _VDLLNQEIEFLK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.4064 2 730.903399 1459.79225 NaN NaN NaN 0.24791 0.0001812 NaN NaN NaN NaN 131.86 0.87778 131.86 131.5 132.38 0 0 0 0 7.1824E-37 2 79064 178.46 152.52 1 NaN NaN 0 77760000 77760000 0 + 36481 1166 13784 14161 57180;57181 57181 VDLNEEETILIIR 13 0 1 Unmodified _VDLNEEETILIIR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;A0A0U1RQE1;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 778.9313 2 778.930145 1555.84574 NaN NaN NaN -0.038919 -3.0315E-05 NaN NaN NaN NaN 113.73 0.56366 113.73 113.45 114.01 -7.6294E-06 0 0 0 9.1349E-38 1 71918 160.36 122.27 1 NaN NaN 0 19675000 19675000 0 36482 695;1595 13785 14162 57182 57182 VDLNEEETILIIR 13 0 1 Unmodified _VDLNEEETILIIR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;A0A0U1RQE1;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.9358 2 778.930145 1555.84574 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.58 1 113.58 113.08 114.08 -7.6294E-06 0 0 0 2.2546E-16 1 71919 125.74 99.226 1 36483 695;1595 13785 14162 57183 57183 VDLNEEETILIIR 13 0 1 Unmodified _VDLNEEETILIIR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;A0A0U1RQE1;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.9307 2 778.930145 1555.84574 NaN NaN NaN 0.51536 0.00040143 NaN NaN NaN NaN 113.11 0.54634 113.11 112.88 113.43 0 0 0 0 3.9386E-48 1 73252 174.4 135.09 1 NaN NaN 0 22865000 22865000 0 36484 695;1595 13785 14162 57184 57184 VDLNEEETILIIR 13 0 1 Unmodified _VDLNEEETILIIR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;A0A0U1RQE1;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.9357 2 778.930145 1555.84574 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113 1 113 112.5 113.5 0 0 0 0 2.4114E-16 1 73236 125.23 98.712 1 36485 695;1595 13785 14162 57185 57185 VDLNEEETILIIR 13 0 1 Unmodified _VDLNEEETILIIR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;A0A0U1RQE1;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 779.4326 2 778.930145 1555.84574 NaN NaN NaN 0.057906 4.5105E-05 NaN NaN NaN NaN 125.01 0.56985 125.01 124.62 125.19 0 0 0 0 4.3529E-14 1 74911 125.23 92.227 1 NaN NaN 0 3653600 3653600 0 36486 695;1595 13785 14162 57186 57186 VDLNEEETILIIR 13 0 1 Unmodified _VDLNEEETILIIR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;A0A0U1RQE1;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.935 2 778.930145 1555.84574 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.87 1 124.87 124.37 125.37 7.6294E-06 0 0 0 9.6343E-05 1 74888 93.258 74.015 1 36487 695;1595 13785 14162 57187 57187 VDLNEEETILIIR 13 0 1 Unmodified _VDLNEEETILIIR_ 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;A0A0U1RQE1;P51531;A0A0U1RQZ9;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.9349 2 778.930145 1555.84574 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.69 1 124.69 124.19 125.19 0 0 0 0 8.7105E-07 1 73853 104.79 84.491 1 36488 695;1595 13785 14162 57188 57188 VDLQSLPTR 9 0 1 Unmodified _VDLQSLPTR_ 0 0 0 B4DIS3;Q9C005 B4DIS3 B4DIS3 LOC84661;DPY30 Protein dpy-30 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.791 2 514.790381 1027.56621 83630.21 0.34935 0.00017984 -0.2684 -0.00013817 0.080956 4.1675E-05 514.790257784236 519.794614973665 61.501 1.4076 61.501 60.801 62.209 0 299 107 4 0 0 0 0.0031039 2 35026 72.643 57.492 1 0.59992 0.6178 0 24728000 15561000 9167000 36489 982 13786 14163 57189;57190 57189 VDLQSLPTR 9 0 1 Unmodified _VDLQSLPTR_ 0 0 0 B4DIS3;Q9C005 B4DIS3 B4DIS3 LOC84661;DPY30 Protein dpy-30 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7945 2 514.790381 1027.56621 NaN NaN NaN 0.66259 0.0003411 NaN NaN NaN NaN 60.399 0.87017 60.399 59.996 60.866 0 0 0 0 0.01909 1 35105 59.597 32.459 1 NaN NaN 0 11299000 0 11299000 36490 982 13786 14163 57191 57191 VDLQSLPTR 9 0 1 Unmodified _VDLQSLPTR_ 0 0 0 B4DIS3;Q9C005 B4DIS3 B4DIS3 LOC84661;DPY30 Protein dpy-30 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 519.7949 2 514.790381 1027.56621 87100.33 0.12224 6.2929E-05 0.19669 0.00010125 0.31893 0.00016418 514.79043486783 519.794595966275 70.585 1.0247 70.585 70.337 71.361 0 128 67 4 0 0 0 0.013268 2 37013 56.729 47.515 1 0.90852 0.79792 0 1801700 1043400 758230 36491 982 13786 14163 57192;57193 57192 VDLVLLGK 8 1 0 Unmodified _VDLVLLGK_ 0 0 0 P38117 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 432.7861 2 428.778754 855.542954 NaN NaN NaN -0.016917 -7.2538E-06 NaN NaN NaN NaN 92.214 0.75461 92.214 91.804 92.559 -7.6294E-06 0 0 0 0.043729 1 55713 52.403 30.875 1 NaN NaN 0 20649000 0 20649000 36492 1551 13787 14164 57194 57194 VDMKEEPLAVSK 12 2 0 Oxidation (M) _VDM(ox)KEEPLAVSK_ VDM(1)KEEPLAVSK VDM(58.12)KEEPLAVSK 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.9153 3 454.570882 1360.69082 NaN NaN NaN -2.5279 -0.0011491 NaN NaN NaN NaN 28.579 0.30056 28.579 28.419 28.719 0 0 0 0 0.0035013 1 13516 58.116 42.175 1 NaN NaN 0 75483000 0 75483000 36493 1569 13788 14165 57195 57195 1346 VDMKEEPLAVSK 12 2 0 Oxidation (M) _VDM(ox)KEEPLAVSK_ VDM(1)KEEPLAVSK VDM(83.62)KEEPLAVSK 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.3665 2 681.352685 1360.69082 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.527 1 28.527 28.027 29.027 0 0 0 0 0.00035561 1 13493 83.617 56.944 1 36494 1569 13788 14165 57196 57196 1346 VDMKEEPLAVSK 12 2 0 Oxidation (M) _VDM(ox)KEEPLAVSK_ VDM(1)KEEPLAVSK VDM(84.17)KEEPLAVSK 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3685 2 681.352685 1360.69082 NaN NaN NaN -3.7373 -0.0025464 NaN NaN NaN NaN 27.855 0.31898 27.855 27.628 27.947 0 0 0 0 0.0019403 1 13127 84.169 55.211 1 NaN NaN 0 32827000 0 32827000 36495 1569 13788 14165 57197 57197 1346 VDNALQSGNSQESVTEQDSK 20 1 0 Unmodified _VDNALQSGNSQESVTEQDSK_ 0 0 0 Q0KKI6;V9HW34;Q6PJF2;Q7Z3Y4;Q6PIL8;Q6P5S8;Q6GMX0;Q8TCD0;P01834;Q5EFE6;P0DOX7 Q0KKI6 Q0KKI6 HEL-213;IGK@;IGKC Ig kappa chain C region ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1068.9904 2 1068.488 2134.96145 NaN NaN NaN -0.40436 -0.00043206 NaN NaN NaN NaN 32.667 0.19656 32.667 32.553 32.75 0 0 0 0 0.0015535 1 16244 42.568 34.593 1 NaN NaN 0 3791400 3791400 0 36496 1439 13789 14166 57198 57198 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.8732 2 784.868608 1567.72266 68432.22 0.87193 0.00068435 -0.1011 -7.935E-05 0.77083 0.000605 784.868515868617 789.872683886683 31.055 1.0539 31.055 30.717 31.771 0 619 97 8 0 0 0 5.9456E-142 3 15552 266.97 242.13 1 1.2026 1.4222 0 282390000 112990000 169390000 36497 559 13790 14167 57199;57200;57201 57200 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.5816 3 523.581497 1567.72266 82369.11 0.64648 0.00033849 -0.5065 -0.00026519 0.13998 7.3291E-05 523.581356458832 526.917241100116 31.051 1.6439 31.051 30.605 32.249 0 1018 154 10 0 0 0 2.1177E-09 2 15177 117.93 117.93 1 1.235 1.465 0 649940000 283660000 366280000 36498 559 13790 14167 57202;57203 57202 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 789.8729 2 784.868608 1567.72266 NaN NaN NaN 0.69314 0.00054402 NaN NaN NaN NaN 30.73 0.066662 30.73 30.675 30.742 1.9073E-06 0 0 0 0.0015306 1 15060 75.088 55.326 1 NaN NaN 0 6443700 0 6443700 36499 559 13790 14167 57204 57204 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.8729 2 784.868608 1567.72266 68771.14 0.49983 0.0003923 0.047239 3.7076E-05 0.54707 0.00042938 784.86861978734 789.872772172522 30.406 0.90206 30.406 30.166 31.068 1.9073E-06 539 75 10 0 0 0 3.0205E-11 4 15261 125.28 109.71 1 1.1767 1.3686 0 396510000 161560000 234960000 36500 559 13790 14167 57205;57206;57207;57208 57207 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.5818 3 523.581497 1567.72266 82132.26 0.21454 0.00011233 -0.1767 -9.2515E-05 0.037849 1.9817E-05 523.58154224806 526.917467350325 30.441 1.5652 30.441 30.101 31.666 0 803 135 10 0 0 0 5.8059E-14 3 15277 128.31 121.58 1 1.192 1.4034 0 1059800000 467070000 592720000 36501 559 13790 14167 57209;57210;57211 57211 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.8087 3 523.581497 1567.72266 84100.69 0.11148 5.8368E-05 0.54223 0.0002839 0.65371 0.00034227 523.581618587491 526.917412023146 33.253 0.45354 33.253 33.03 33.484 3.8147E-06 120 40 5 0 0 0 0.0038867 1 16639 58.32 52.936 1 1.2784 1.3004 0 20480000 9212700 11267000 36502 559 13790 14167 57212 57212 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.5818 3 523.581497 1567.72266 82695.65 0.048826 2.5565E-05 -0.17374 -9.0969E-05 -0.12492 -6.5404E-05 523.581663730247 526.917331895262 35.845 1.804 35.845 35.273 37.077 0 970 155 10 0 0 0 2.3232E-05 4 16181 99.011 99.011 1 0.54948 0.47553 0 130730000 83526000 47207000 36503 559 13790 14167 57213;57214;57215;57216 57215 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.8696 2 784.868608 1567.72266 68831.62 0.38988 0.000306 -0.054473 -4.2754E-05 0.33541 0.00026325 784.868503303652 789.872819563124 35.934 1.1939 35.934 35.294 36.488 0 665 100 9 0 0 0 2.2021E-13 3 16186 128.54 114.12 1 0.56461 0.47082 0 22901000 14822000 8078900 36504 559 13790 14167 57217;57218;57219 57218 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.5815 3 523.581497 1567.72266 84469.14 0.25062 0.00013122 -0.0030737 -1.6094E-06 0.24754 0.00012961 523.581439880117 526.917560101568 37.979 0.76778 37.979 37.494 38.261 0 210 62 5 0 0 0 0.00032251 1 17162 51.939 51.939 1 0.59454 0.51497 0 2556400 1440500 1115900 36505 559 13790 14167 57220 57220 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.5816 3 523.581497 1567.72266 82252.13 0.32437 0.00016983 -0.41225 -0.00021584 -0.087876 -4.601E-05 523.581348131758 526.917324082537 36.11 1.9363 36.11 35.378 37.314 0 1044 167 11 0 0 0 2.379E-05 3 15316 86.291 82.323 1 0.56902 0.49683 0 131330000 84123000 47203000 36506 559 13790 14167 57221;57222;57223 57221 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;E5RGW4 A0A0S2Z4G7 A0A0S2Z4G7 NPM1 Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.8685 2 784.868608 1567.72266 68553.32 0.59827 0.00046957 -0.21168 -0.00016614 0.38659 0.00030342 784.868408746742 789.872575544083 36.13 1.428 36.13 35.389 36.817 0 765 123 9 0 0 0 7.2189E-09 3 15765 117.93 103.51 1 0.56033 0.48878 0 41782000 26650000 15132000 36507 559 13790 14167 57224;57225;57226 57225 VDNIQAGELTEGIWR 15 0 1 Unmodified _VDNIQAGELTEGIWR_ 0 0 0 A0A024R4Z6;Q08945;Q59GH7 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.9345 2 850.933751 1699.85295 63928.59 0.86221 0.00073369 -0.33316 -0.0002835 0.52905 0.00045019 850.933724249351 855.937903317974 104.53 1.0374 104.53 104.13 105.17 0 581 84 9 0 0 0 1.4573E-38 2 64441 169.23 169.23 1 0.63441 0.74849 0 246080000 152910000 93162000 36508 167 13791 14168 57227;57228 57228 VDNIQAGELTEGIWR 15 0 1 Unmodified _VDNIQAGELTEGIWR_ 0 0 0 A0A024R4Z6;Q08945;Q59GH7 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.9334 2 850.933751 1699.85295 64006.12 0.59733 0.00050829 -0.3301 -0.00028089 0.26723 0.00022739 850.933742142702 855.93793832588 103.83 0.97234 103.83 103.45 104.42 0 603 82 10 0 0 0 1.893E-22 2 65572 148.18 148.18 1 0.64096 0.73917 0 232670000 144810000 87856000 36509 167 13791 14168 57229;57230 57230 VDNIQAGELTEGIWR 15 0 1 Unmodified _VDNIQAGELTEGIWR_ 0 0 0 A0A024R4Z6;Q08945;Q59GH7 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 855.9394 2 850.933751 1699.85295 65282.52 0.74302 0.00063226 -0.13849 -0.00011784 0.60454 0.00051442 850.933776486832 855.937842061822 116.18 0.73147 116.18 115.91 116.64 7.6294E-06 202 31 8 0 0 0 2.2366E-38 2 68120 165.7 149.16 1 0.9029 0.7795 0 88510000 47236000 41274000 36510 167 13791 14168 57231;57232 57231 VDNIQAGELTEGIWR 15 0 1 Unmodified _VDNIQAGELTEGIWR_ 0 0 0 A0A024R4Z6;Q08945;Q59GH7 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 855.9385 2 850.933751 1699.85295 64880.49 0.94633 0.00080527 -0.17867 -0.00015204 0.76766 0.00065323 850.933723116059 855.937769538465 116.05 0.70837 116.05 115.8 116.51 -7.6294E-06 248 33 9 0 0 0 1.2687E-15 2 67100 134.99 134.08 1 0.92149 0.80425 0 80454000 41670000 38785000 36511 167 13791 14168 57233;57234 57233 VDNLEEFLNDPLK 13 1 0 Unmodified _VDNLEEFLNDPLK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.4005 2 773.393396 1544.77224 NaN NaN NaN -0.072848 -5.6341E-05 NaN NaN NaN NaN 117.5 0.46072 117.5 117.32 117.78 0 0 0 0 0.0017464 1 75325 73.781 55.972 1 NaN NaN 0 4251800 0 4251800 36512 1699 13792 14169 57235 57235 VDNLLQLGFTAQEAR 15 0 1 Unmodified _VDNLLQLGFTAQEAR_ 0 0 0 H7C5N1;A0A090N8Q5;H3BM14;H3BM74;Q9Y5A7 H7C5N1 H7C5N1 NUB1;NYREN18 NEDD8 ultimate buster 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 842.9474 2 837.944118 1673.87368 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.97 1 110.97 110.47 111.47 0 0 0 0 0.0014278 1 69777 63.727 39.345 1 36513 458 13793 14170 57236 57236 VDNLLQLGFTAQEAR 15 0 1 Unmodified _VDNLLQLGFTAQEAR_ 0 0 0 H7C5N1;A0A090N8Q5;H3BM14;H3BM74;Q9Y5A7 H7C5N1 H7C5N1 NUB1;NYREN18 NEDD8 ultimate buster 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.9471 2 837.944118 1673.87368 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.38 1 110.39 109.89 110.89 7.6294E-06 0 0 0 0.0014443 1 71051 64.199 40.212 1 36514 458 13793 14170 57237 57237 VDNLTYR 7 0 1 Unmodified _VDNLTYR_ 0 0 0 A0A024R3A8;Q9BRL6;A4D2F7;A4D2F6;J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7;B3KUY1 A0A024R3A8;J3QL05 J3QL05 SRP46;SRSF8;LOC346472;LOC392896;SRSF2;SFRS2 Serine/arginine-rich splicing factor 8;Serine/arginine-rich splicing factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 440.7298 2 440.729792 879.445031 91049.13 0.017968 7.9191E-06 0.41524 0.00018301 0.43321 0.00019093 440.729988043106 445.733792847576 29.013 0.35003 29.013 28.809 29.159 0 82 17 8 0 0 0 0.010479 2 13897 111.04 73.942 1 1.3182 1.5005 0 115130000 44559000 70570000 36515 258;133 13794 14171 57238;57239 57239 VDNLTYR 7 0 1 Unmodified _VDNLTYR_ 0 0 0 A0A024R3A8;Q9BRL6;A4D2F7;A4D2F6;J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7;B3KUY1 A0A024R3A8;J3QL05 J3QL05 SRP46;SRSF8;LOC346472;LOC392896;SRSF2;SFRS2 Serine/arginine-rich splicing factor 8;Serine/arginine-rich splicing factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.7299 2 440.729792 879.445031 NaN NaN NaN 1.1002 0.0004849 NaN NaN NaN NaN 28.263 0.33587 28.263 28.038 28.374 0 0 0 0 0.023495 1 13457 95.541 41.016 1 NaN NaN 0 46975000 46975000 0 36516 258;133 13794 14171 57240 57240 VDNMIIQSISLLDQLDK 17 1 0 Oxidation (M) _VDNM(ox)IIQSISLLDQLDK_ VDNM(1)IIQSISLLDQLDK VDNM(60.63)IIQSISLLDQLDK 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.4738 2 981.016623 1960.01869 61230.52 0.67795 0.00066508 -0.41927 -0.00041131 0.25868 0.00025377 981.517767507016 985.023047284937 130.11 0.29495 130.11 130.03 130.32 0 76 17 6 0 0 0 6.167E-05 1 84935 60.628 60.628 1 1.0667 1.0839 0 13763000 6483700 7279500 36517 785 13795 14172 57241 57241 625 VDNMIIQSISLLDQLDK 17 1 0 Oxidation (M) _VDNM(ox)IIQSISLLDQLDK_ VDNM(1)IIQSISLLDQLDK VDNM(44.44)IIQSISLLDQLDK 0 1 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 985.0215 2 981.016623 1960.01869 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.86 1 134.86 134.36 135.36 0 0 0 0 0.0050752 1 81657 44.436 36.131 1 36518 785 13795 14172 57242 57242 625 VDPDSQQNHSEIK 13 1 0 Unmodified _VDPDSQQNHSEIK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.5707 3 499.57071 1495.6903 87926.56 0.16174 8.0802E-05 0.44189 0.00022075 0.60363 0.00030156 499.570731888849 502.242505667189 16.701 0.30108 16.701 16.604 16.905 0 36 10 6 0 0 0 0.030356 1 3988 20.928 18.366 1 0.3292 0.33584 0 4443400 3285000 1158400 36519 2014 13796 14173 57243 57243 VDPDSQQNHSEIK 13 1 0 Unmodified _VDPDSQQNHSEIK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.8524 2 748.852426 1495.6903 71789.05 0.4878 0.00036529 0.31672 0.00023717 0.80451 0.00060246 748.852632500284 752.860442905806 16.7 0.22791 16.7 16.63 16.858 0 26 7 6 0 0 0 0.0025434 1 3992 53.327 43.095 1 0.44175 0.46923 0 3708700 2477600 1231000 36520 2014 13796 14173 57244 57244 VDPDSQQNHSEIK 13 1 0 Unmodified _VDPDSQQNHSEIK_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.8528 2 748.852426 1495.6903 NaN NaN NaN 0.38837 0.00029083 NaN NaN NaN NaN 16.706 0.17184 16.706 16.628 16.8 0 0 0 0 0.038429 1 3792 41.54 30.71 1 NaN NaN 0 1704200 1704200 0 36521 2014 13796 14173 57245 57245 VDPEDTNLNQDSAK 14 1 0 Unmodified _VDPEDTNLNQDSAK_ 0 0 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.362 2 773.354999 1544.69544 71078.2 0.67376 0.00052105 0.10728 8.2967E-05 0.78104 0.00060402 773.355210609224 777.361887010396 31.731 0.59627 31.731 31.482 32.078 0 178 56 5 0 0 0 0.026943 1 15561 31.989 24.726 1 0.72506 0.74564 0 10715000 5366800 5347900 36522 1806 13797 14174 57246 57246 VDPEDTNLNQDSAK 14 1 0 Unmodified _VDPEDTNLNQDSAK_ 0 0 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.3556 2 773.354999 1544.69544 NaN NaN NaN 0.036809 2.8467E-05 NaN NaN NaN NaN 31.184 0.65058 31.184 30.915 31.566 0 0 0 0 0.00052661 1 15306 78.692 64.273 1 NaN NaN 0 10479000 10479000 0 36523 1806 13797 14174 57247 57247 VDPEDTNLNQDSAK 14 1 0 Unmodified _VDPEDTNLNQDSAK_ 0 0 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.3639 2 773.354999 1544.69544 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.992 1 30.992 30.492 31.492 -1.9073E-06 0 0 0 0.010378 1 15263 51.286 24.188 1 36524 1806 13797 14174 57248 57248 VDPEDTNLNQDSAK 14 1 0 Unmodified _VDPEDTNLNQDSAK_ 0 0 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 773.3557 2 773.354999 1544.69544 70335.43 0.54465 0.00042121 0.39479 0.00030531 0.93944 0.00072652 773.355049858655 777.363292673772 36.781 0.4188 36.781 36.57 36.989 -3.8147E-06 155 36 6 0 0 0 0.00074015 1 16530 58.674 44.255 1 0.67142 0.53231 0 4290200 2363200 1927000 36525 1806 13797 14174 57249 57249 VDPEDTNLNQDSAK 14 1 0 Unmodified _VDPEDTNLNQDSAK_ 0 0 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 773.3548 2 773.354999 1544.69544 69624.66 0.5511 0.0004262 -0.021945 -1.6971E-05 0.52916 0.00040923 773.354630491922 777.362414776255 37.04 0.58901 37.04 36.782 37.371 0 234 50 8 0 0 0 0.001692 2 16179 51.875 47.175 1 0.83018 0.66917 0 4287700 2107000 2180700 36526 1806 13797 14174 57250;57251 57250 VDPEIQNVK 9 1 0 Unmodified _VDPEIQNVK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 521.2824 2 521.282389 1040.55022 NaN NaN NaN 0.24039 0.00012531 NaN NaN NaN NaN 35.616 0.62705 35.616 35.37 35.997 0 0 0 0 0.00010296 2 17959 99.755 62.166 1 NaN NaN 0 71486000 71486000 0 + 36527 1166 13798 14175 57252;57253 57252 VDPEIQNVK 9 1 0 Unmodified _VDPEIQNVK_ 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.2819 2 521.282389 1040.55022 NaN NaN NaN 0.40307 0.00021011 NaN NaN NaN NaN 40.629 0.72848 40.629 40.362 41.091 0 0 0 0 0.028466 1 18663 53.968 29.045 1 NaN NaN 0 21911000 21911000 0 + 36528 1166 13798 14175 57254 57254 VDPLFTELLNGIR 13 0 1 Unmodified _VDPLFTELLNGIR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.9208 2 743.916841 1485.81913 72899.19 0.82918 0.00061684 0.1289 9.5891E-05 0.95808 0.00071273 743.916903587156 748.921072883793 132.87 0.59195 132.87 132.54 133.13 0 107 29 5 0 0 0 0.00019019 2 86693 70.977 62.752 1 1.7863 1.8643 0 4943600 1841600 3102000 36529 1205 13799 14176 57255;57256 57255 VDPLFTELLNGIR 13 0 1 Unmodified _VDPLFTELLNGIR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.4193 2 743.916841 1485.81913 72968.44 0.95132 0.0007077 0.17231 0.00012818 1.1236 0.00083588 743.916773516827 748.921175981563 132.42 0.61864 132.42 132.15 132.77 0 151 36 7 0 0 0 0.00013248 1 88677 73.781 73.781 1 1.4427 1.4547 0 6288700 2635600 3653100 36530 1205 13799 14176 57257 57257 VDPMAIVVFHQADIGEYVR 19 0 1 Oxidation (M) _VDPM(ox)AIVVFHQADIGEYVR_ VDPM(1)AIVVFHQADIGEYVR VDPM(94.38)AIVVFHQADIGEYVR 0 1 0 Q9Y221;B3KM49 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.0367 3 725.701618 2174.08302 70959.34 0.84927 0.00061631 0.19818 0.00014382 1.0474 0.00076013 726.036026104291 729.372168334463 109.06 0.70171 109.06 108.72 109.42 -7.6294E-06 287 43 9 0 0 0 7.3158E-09 2 68157 94.384 89.198 1 1.6224 1.7965 0 62419000 24491000 37928000 36531 2119 13800 14177 57258;57259 57258 1943 VDPMAIVVFHQADIGEYVR 19 0 1 Oxidation (M) _VDPM(ox)AIVVFHQADIGEYVR_ VDPM(1)AIVVFHQADIGEYVR VDPM(104.89)AIVVFHQADIGEYVR 0 1 0 Q9Y221;B3KM49 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.0381 3 725.701618 2174.08302 71304.88 0.64428 0.00046755 0.05601 4.0646E-05 0.70029 0.0005082 726.03594760407 729.037916616408 108.46 0.72878 108.46 108.09 108.82 7.6294E-06 309 49 9 0 0 0 1.3687E-12 2 69315 104.89 99.541 1 1.5355 1.7758 0 68656000 24846000 43810000 36532 2119 13800 14177 57260;57261 57260 1943 VDPMAIVVFHQADIGEYVR 19 0 1 Oxidation (M) _VDPM(ox)AIVVFHQADIGEYVR_ VDPM(1)AIVVFHQADIGEYVR VDPM(65.78)AIVVFHQADIGEYVR 0 1 0 Q9Y221;B3KM49 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.3725 3 725.701618 2174.08302 70721.2 0.95639 0.00069405 -0.14857 -0.00010782 0.80782 0.00058624 726.03584630024 729.372028141749 119.69 0.38551 119.69 119.53 119.92 -7.6294E-06 150 19 9 0 0 0 4.1449E-06 2 70907 65.784 65.784 1 0.83045 0.67925 0 13586000 7850200 5735600 36533 2119 13800 14177 57262;57263 57263 1943 VDPMAIVVFHQADIGEYVR 19 0 1 Oxidation (M) _VDPM(ox)AIVVFHQADIGEYVR_ VDPM(1)AIVVFHQADIGEYVR VDPM(59)AIVVFHQADIGEYVR 0 1 0 Q9Y221;B3KM49 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.3742 3 725.701618 2174.08302 71487.04 0.72074 0.00052304 0.082448 5.9833E-05 0.80319 0.00058287 726.035821713898 729.037934041594 119.46 0.39981 119.46 119.3 119.7 7.6294E-06 136 19 10 0 0 0 6.347E-06 2 69839 58.997 58.997 1 0.84261 0.69358 0 14111000 6899500 7211100 36534 2119 13800 14177 57264;57265 57264 1943 VDPSQPIDLTQLVNGR 16 0 1 Unmodified _VDPSQPIDLTQLVNGR_ 0 0 0 E5RIZ4;B2R739;Q9P015;E5RHF4 E5RIZ4 E5RIZ4 MRPL15 39S ribosomal protein L15, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 876.9695 2 876.467958 1750.92136 67604.28 0.60241 0.00052799 -0.010839 -9.5004E-06 0.59157 0.00051849 876.468342907034 881.471783566863 112.48 0.28405 112.48 112.31 112.6 -7.6294E-06 56 20 5 0 0 0 0.0058786 2 72768 35.677 35.677 1 1.5496 1.542 0 8148000 3093900 5054100 36535 847 13801 14178 57266;57267 57267 VDQIQEIVTGNPTVIK 16 1 0 Unmodified _VDQIQEIVTGNPTVIK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 877.4882 2 877.488359 1752.96216 NaN NaN NaN -0.11235 -9.8585E-05 NaN NaN NaN NaN 100.05 0.35315 100.05 99.859 100.21 0 0 0 0 0.0014044 1 61261 63.76 32.575 1 NaN NaN 0 4868300 4868300 0 36536 352 13802 14179 57268 57268 VDQIQEIVTGNPTVIK 16 1 0 Unmodified _VDQIQEIVTGNPTVIK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.489 2 877.488359 1752.96216 67607.27 0.62683 0.00055003 -0.59198 -0.00051945 0.034849 3.0579E-05 877.487961873575 881.494463978224 99.426 0.51895 99.426 99.063 99.582 7.6294E-06 159 43 6 0 0 0 0.0001086 3 62272 78.763 78.763 1 1.7397 1.7719 0 12322000 4217500 8104400 36537 352 13802 14179 57269;57270;57271 57270 VDQIQEIVTGNPTVIK 16 1 0 Unmodified _VDQIQEIVTGNPTVIK_ 0 0 0 A4QPB0;A0A024RC65;P46940;A0A0J9YXZ5;H0YLE8;B4E2M0 A4QPB0 A4QPB0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.4973 2 877.488359 1752.96216 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.588 1 99.588 99.088 100.09 0 0 0 0 0.00082956 1 62442 61.11 50.205 1 36538 352 13802 14179 57272 57272 VDQMEGGAAGPSASVR 16 0 1 Oxidation (M) _VDQM(ox)EGGAAGPSASVR_ VDQM(1)EGGAAGPSASVR VDQM(62.92)EGGAAGPSASVR 0 1 0 H7C2K3;H0Y6N5;H0Y742;A7MCZ7;E9PHI4;A0A146IHP0;A4D2Q0;O94901 H7C2K3 H7C2K3 SUN1;UNC84A SUN domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 779.3638 2 774.359561 1546.70457 71025.45 0.69102 0.00053509 -0.29224 -0.0002263 0.39877 0.00030879 774.359633842658 779.363303107794 23.477 0.26302 23.477 23.336 23.599 0 34 12 5 0 0 0 7.3239E-05 1 9299 62.924 52.97 1 0.89178 0.96129 0 2911800 1292400 1619400 36539 627 13803 14180 57273 57273 487 VDQMEGGAAGPSASVR 16 0 1 Oxidation (M) _VDQM(ox)EGGAAGPSASVR_ VDQM(1)EGGAAGPSASVR VDQM(47.19)EGGAAGPSASVR 0 1 0 H7C2K3;H0Y6N5;H0Y742;A7MCZ7;E9PHI4;A0A146IHP0;A4D2Q0;O94901 H7C2K3 H7C2K3 SUN1;UNC84A SUN domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.3597 2 774.359561 1546.70457 73231.08 0.36475 0.00028244 0.019022 1.473E-05 0.38377 0.00029717 774.359580418993 779.363826738463 23.259 0.29298 23.259 23.109 23.402 0 34 12 4 0 0 0 0.00047059 1 9166 47.189 41.648 1 1.2221 1.2732 0 4427600 1691100 2736600 36540 627 13803 14180 57274 57274 487 VDQSILTGESVSVIK 15 1 0 Unmodified _VDQSILTGESVSVIK_ 0 0 0 A0A0S2Z3L2;P16615;Q8N3X5;Q7Z675;Q7Z6E5;O14983 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2;DKFZp779O2152;DKFZp779G2251;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.9427 2 787.935428 1573.8563 NaN NaN NaN -0.23779 -0.00018736 NaN NaN NaN NaN 95.268 0.54127 95.268 95.054 95.595 0 0 0 0 0.0017811 1 57980 64.827 64.827 1 NaN NaN 0 7551100 0 7551100 36541 554 13804 14181 57275 57275 VDQSILTGESVSVIK 15 1 0 Unmodified _VDQSILTGESVSVIK_ 0 0 0 A0A0S2Z3L2;P16615;Q8N3X5;Q7Z675;Q7Z6E5;O14983 A0A0S2Z3L2 A0A0S2Z3L2 ATP2A2;DKFZp779O2152;DKFZp779G2251;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.944 2 787.935428 1573.8563 71501.44 0.81769 0.00064428 0.16134 0.00012713 0.97903 0.00077141 787.93526019488 791.942453347204 94.631 0.55127 94.631 94.352 94.903 -7.6294E-06 148 45 5 0 0 0 0.00062148 2 58778 69.03 69.03 1 2.5272 2.6613 0 19811000 5627300 14184000 36542 554 13804 14181 57276;57277 57276 VDREQLVQK 9 1 1 Acetyl (Protein N-term) _(ac)VDREQLVQK_ 1 0 1 B4DE78;B3KNB4;P61981 B4DE78 B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8314 2 578.81967 1155.62479 NaN NaN NaN -0.10269 -5.9439E-05 NaN NaN NaN NaN 39.403 0.2523 39.403 39.309 39.562 0 0 0 0 0.0046249 1 20868 69.423 8.8337 1 NaN NaN 0 6846900 0 6846900 36543 912 13805 14182 57278 57278 VDSAATSGYEIGNPPDYR 18 0 1 Unmodified _VDSAATSGYEIGNPPDYR_ 0 0 0 G5E9R5;A0A140VK37;Q59EH3;P24666 G5E9R5 G5E9R5 ACP1 Low molecular weight phosphotyrosine protein phosphatase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 961.4451 2 956.439594 1910.86464 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.749 1 69.749 69.249 70.249 0 0 0 0 0.0053727 1 40560 49.298 43.195 1 36544 615 13806 14183 57279 57279 VDSAATSGYEIGNPPDYR 18 0 1 Unmodified _VDSAATSGYEIGNPPDYR_ 0 0 0 G5E9R5;A0A140VK37;Q59EH3;P24666 G5E9R5 G5E9R5 ACP1 Low molecular weight phosphotyrosine protein phosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 961.946 2 956.439594 1910.86464 NaN NaN NaN 0.50279 0.00048089 NaN NaN NaN NaN 68.792 0.16615 68.792 68.705 68.871 0 0 0 0 5.0247E-09 1 40887 80.96 74.518 1 NaN NaN 0 6323300 0 6323300 36545 615 13806 14183 57280 57280 VDSEGDFSENDDAAGDFR 18 0 1 Unmodified _VDSEGDFSENDDAAGDFR_ 0 0 0 Q8NE02;O43823;M0QYL4;B7Z8L8 Q8NE02 Q8NE02 AKAP8 A-kinase anchor protein 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 978.3924 2 973.387756 1944.76096 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.591 1 62.591 62.091 63.091 0 0 0 0 0.00043882 1 36725 57.434 49.129 1 36546 1390 13807 14184 57281 57281 VDSIQFSNTSNR 12 0 1 Unmodified _VDSIQFSNTSNR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.3708 2 684.33113 1366.64771 73528.23 0.55631 0.0003807 0.62285 0.00042623 1.1792 0.00080693 684.331404663357 689.335573481086 43.509 0.57143 43.509 43.096 43.667 0 212 46 6 0 0 0 1.5916E-05 1 23124 102.52 102.52 1 0.75834 0.85855 0 105210000 53560000 51645000 36547 1942 13808 14185 57282 57282 VDSIQFSNTSNR 12 0 1 Unmodified _VDSIQFSNTSNR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.3513 2 684.33113 1366.64771 73283.34 0.81578 0.00055826 -0.76249 -0.00052179 0.05329 3.6468E-05 684.330943963935 689.334201333793 43.616 0.42768 43.616 43.556 43.984 0 166 37 6 0 0 0 0.01011 1 23483 64.906 55.11 1 0.59423 0.6719 0 103260000 58235000 45022000 36548 1942 13808 14185 57283 57283 VDSIQFSNTSNR 12 0 1 Unmodified _VDSIQFSNTSNR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3327 2 684.33113 1366.64771 73180.06 0.69328 0.00047443 -0.094893 -6.4938E-05 0.59839 0.0004095 684.331074095918 689.335094493469 42.926 0.88734 42.926 42.512 43.399 0 396 74 8 0 0 0 0.00012263 2 23018 94.465 94.465 1 0.76094 0.87366 0 189180000 105540000 83642000 36549 1942 13808 14185 57284;57285 57284 VDSIQFSNTSNR 12 0 1 Unmodified _VDSIQFSNTSNR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.3206 2 684.33113 1366.64771 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.353 1 43.353 42.853 43.853 0 0 0 0 0.035296 1 23517 44.318 29.651 1 36550 1942 13808 14185 57286 57286 VDSIQFSNTSNR 12 0 1 Unmodified _VDSIQFSNTSNR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.3311 2 684.33113 1366.64771 74154.43 0.46283 0.00031673 -0.094831 -6.4896E-05 0.368 0.00025183 684.331266183733 689.335071623965 50.302 1.0525 50.302 49.802 50.854 0 389 85 7 0 0 0 0.00024036 1 24547 87.568 82.227 1 1.6349 1.3876 0 33136000 13224000 19912000 36551 1942 13808 14185 57287 57287 VDSIQFSNTSNR 12 0 1 Unmodified _VDSIQFSNTSNR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3357 2 684.33113 1366.64771 73131.55 0.27819 0.00019038 -0.089818 -6.1465E-05 0.18838 0.00012891 684.33130210394 689.335326597765 50.648 1.2382 50.648 50.242 51.48 0 469 87 10 0 0 0 6.6475E-18 2 24320 143.5 143.5 1 1.6813 1.4647 0 25046000 9074600 15971000 36552 1942 13808 14185 57288;57289 57289 VDSLEFSLESQK 12 1 0 Unmodified _VDSLEFSLESQK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3452 2 691.345914 1380.67728 NaN NaN NaN 0.87416 0.00060435 NaN NaN NaN NaN 83.428 0.34827 83.428 83.289 83.638 0 0 0 0 0.0020949 1 49994 88.056 69.789 1 NaN NaN 0 8335600 8335600 0 36553 1581 13809 14186 57290 57290 VDSLEFSLESQK 12 1 0 Unmodified _VDSLEFSLESQK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.3457 2 691.345914 1380.67728 74780.43 0.74162 0.00051272 1.0467 0.00072362 1.7883 0.0012363 691.34552365098 695.35405538372 82.482 0.68803 82.482 81.97 82.658 0 128 60 4 0 0 0 0.00021114 1 50485 81.017 81.017 1 1.6854 1.7165 0 30704000 12602000 18102000 36554 1581 13809 14186 57291 57291 VDSLLENLEK 10 1 0 Unmodified _VDSLLENLEK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V5V7;B4DQQ2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V4W0;B4DY08;B2R5W2;G3V4C1;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.3212 2 580.313886 1158.61322 77494.53 0.74233 0.00043078 -0.018603 -1.0795E-05 0.72372 0.00041999 580.314816875638 584.320897815885 86.942 0.99451 86.942 86.63 87.624 0 501 83 12 0 0 0 1.9634E-22 2 52448 169.44 94.416 1 1.019 1.2388 0 2439600000 1017500000 1422100000 36555 837;781 13810 14187 57292;57293 57292 VDSLLENLEK 10 1 0 Unmodified _VDSLLENLEK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V5V7;B4DQQ2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V4W0;B4DY08;B2R5W2;G3V4C1;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.3223 2 580.313886 1158.61322 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.714 1 87.714 87.214 88.214 0 0 0 0 0.022361 1 52912 53.124 16.79 1 36556 837;781 13810 14187 57294 57294 VDSLLENLEK 10 1 0 Unmodified _VDSLLENLEK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V5V7;B4DQQ2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V4W0;B4DY08;B2R5W2;G3V4C1;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3222 2 580.313886 1158.61322 77649.23 0.80561 0.00046751 0.010898 6.3245E-06 0.81651 0.00047383 580.314649068876 584.320826554305 85.846 1.1856 85.846 85.677 86.863 7.6294E-06 635 98 9 0 0 0 2.8454E-09 3 52830 125.83 73.335 1 1.1155 1.3213 0 2762100000 1233200000 1528800000 36557 837;781 13810 14187 57295;57296;57297 57295 VDSLLENLEK 10 1 0 Unmodified _VDSLLENLEK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V5V7;B4DQQ2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V4W0;B4DY08;B2R5W2;G3V4C1;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.321 2 580.313886 1158.61322 78501.95 0.51207 0.00029716 0.4246 0.0002464 0.93667 0.00054356 580.314526528657 584.320732200924 99.577 0.78332 99.577 99.331 100.11 0 229 51 8 0 0 0 0.00013082 2 56225 96.331 39.602 1 0.6297 0.54974 0 170830000 103980000 66848000 36558 837;781 13810 14187 57298;57299 57298 VDSLLENLEK 10 1 0 Unmodified _VDSLLENLEK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V5V7;B4DQQ2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V4W0;B4DY08;B2R5W2;G3V4C1;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.3209 2 580.313886 1158.61322 78948.84 0.40027 0.00023228 0.44479 0.00025812 0.84506 0.0004904 580.314419068836 584.320797449899 99.416 1.1953 99.416 99.173 100.37 0 346 99 8 0 0 0 0.00037442 2 55308 88.364 40.761 1 0.61216 0.52522 0 139050000 87040000 52010000 36559 837;781 13810 14187 57300;57301 57301 VDSQASITQDSDSIK 15 1 0 Unmodified _VDSQASITQDSDSIK_ 0 0 0 Q6IEH8;Q6KC79;A8K2T2;A6QL62 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.385 2 797.383756 1592.75296 NaN NaN NaN 0.18862 0.0001504 NaN NaN NaN NaN 41.871 0.30671 41.871 41.745 42.052 0 0 0 0 0.00081201 1 22072 67.456 49.32 1 NaN NaN 0 3950400 3950400 0 36560 1843 13811 14188 57302 57302 VDSTTCLFPVEEK 13 1 0 Unmodified _VDSTTCLFPVEEK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.3668 2 762.866157 1523.71776 NaN NaN NaN -0.027625 -2.1074E-05 NaN NaN NaN NaN 84.546 0.25671 84.546 84.374 84.631 0 0 0 0 0.051491 1 51863 39.917 27.301 1 NaN NaN 0 4551000 4551000 0 36561 1688 13812 14189 57303 57303 VDTGPREDLIK 11 1 1 Unmodified _VDTGPREDLIK_ 0 0 1 B2RBC7;Q8TC04;CON__Q9C075;A0A024R1X9;Q9C075 B2RBC7 B2RBC7 KRT23 Keratin, type I cytoskeletal 23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8376 2 621.838059 1241.66157 78476.16 0.56948 0.00035413 -0.79882 -0.00049674 -0.22934 -0.00014261 621.837718701917 630.848919984679 35.136 0.37823 35.136 34.957 35.335 -3.8147E-06 119 33 5 0 0 0 0.0083249 1 17593 66.692 39.388 1 0.63175 0.72981 0 28425000 16148000 12277000 + 36562 95 13813 14190 57304 57304 VDTGPREDLIK 11 1 1 Unmodified _VDTGPREDLIK_ 0 0 1 B2RBC7;Q8TC04;CON__Q9C075;A0A024R1X9;Q9C075 B2RBC7 B2RBC7 KRT23 Keratin, type I cytoskeletal 23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.8383 2 621.838059 1241.66157 78726.3 0.42626 0.00026507 0.26746 0.00016632 0.69373 0.00043138 621.837770293528 630.850200377022 34.138 0.36715 34.138 33.937 34.304 0 93 26 5 0 0 0 0.0022466 2 17213 80.165 56.432 1 0.52476 0.60152 0 23383000 16244000 7139100 + 36563 95 13813 14190 57305;57306 57306 VDTLPYVPEPIK 12 1 0 Unmodified _VDTLPYVPEPIK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.8898 2 685.881936 1369.74932 73518.45 0.7206 0.00049425 0.30604 0.0002099 1.0266 0.00070415 685.882018597254 689.889085336351 101.29 0.82307 101.29 100.91 101.73 0 323 63 7 0 0 0 0.00022365 1 62165 74.162 74.162 1 1.2702 1.3782 0 45423000 19966000 25457000 36564 1945 13814 14191 57307 57307 VDTLPYVPEPIK 12 1 0 Unmodified _VDTLPYVPEPIK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.8819 2 685.881936 1369.74932 74098.05 0.66927 0.00045904 0.25329 0.00017373 0.92256 0.00063277 685.881970130596 689.889071825435 100.54 0.69807 100.54 100.26 100.96 7.6294E-06 313 55 8 0 0 0 0.00018872 2 63202 76.465 76.465 1 1.2279 1.3836 0 59685000 26569000 33116000 36565 1945 13814 14191 57308;57309 57309 VDTLPYVPEPIK 12 1 0 Unmodified _VDTLPYVPEPIK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.8895 2 685.881936 1369.74932 73733 0.99555 0.00068283 0.2729 0.00018718 1.2685 0.00087001 685.881959070797 689.889109752323 113.52 0.78877 113.52 113.24 114.02 -7.6294E-06 213 38 10 0 0 0 0.00095797 1 66001 63.283 63.283 1 2.1343 1.7352 0 29234000 9227800 20006000 36566 1945 13814 14191 57310 57310 VDTLPYVPEPIK 12 1 0 Unmodified _VDTLPYVPEPIK_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.8899 2 685.881936 1369.74932 73863.53 0.63361 0.00043458 0.36479 0.0002502 0.9984 0.00068479 685.882023604237 689.889184446425 113.39 0.8912 113.39 113.08 113.98 0 234 43 9 0 0 0 0.0017153 1 64993 60.434 60.434 1 2.2638 1.8362 0 24552000 7698400 16854000 36567 1945 13814 14191 57311 57311 VDTMIVQAISLLDDLDK 17 1 0 Oxidation (M) _VDTM(ox)IVQAISLLDDLDK_ VDTM(1)IVQAISLLDDLDK VDTM(47.99)IVQAISLLDDLDK 0 1 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 957.0062 2 952.997899 1903.98124 61993.6 0.53983 0.00051446 0.36167 0.00034467 0.9015 0.00085913 953.499985211087 957.005460468581 133.57 0.39413 133.57 133.32 133.71 0 28 8 7 0 0 0 0.0002045 1 87593 47.991 39.887 1 1.2223 1.4344 0 303080000 105760000 197320000 36568 2129 13815 14192 57312 57312 1962 VDTMIVQAISLLDDLDK 17 1 0 Oxidation (M) _VDTM(ox)IVQAISLLDDLDK_ VDTM(1)IVQAISLLDDLDK VDTM(74.99)IVQAISLLDDLDK 0 1 0 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 952.9999 2 952.997899 1903.98124 62119.23 0.51803 0.00049368 0.32265 0.00030749 0.84068 0.00080117 952.998097921338 957.005638595992 133.55 0.50073 133.55 133.26 133.76 0 48 11 9 0 0 0 3.0834E-05 1 89818 74.987 74.987 1 0.86777 0.9995 0 179350000 78463000 100890000 36569 2129 13815 14192 57313 57313 1962 VDVAVNCAGIAVASK 15 1 0 Unmodified _VDVAVNCAGIAVASK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 737.3906 2 737.390133 1472.76571 72039.63 0.75389 0.00055591 0.051665 3.8097E-05 0.80556 0.00059401 737.390138767538 741.39734620859 76.297 0.47878 76.297 75.999 76.478 0 179 38 6 0 0 0 1.0093E-05 2 44930 92.925 92.925 1 1.834 1.8028 0 23509000 8154600 15354000 36570 555 13816 14193 57314;57315 57314 VDVAVNCAGIAVASK 15 1 0 Unmodified _VDVAVNCAGIAVASK_ 0 0 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.3911 2 737.390133 1472.76571 71944.65 0.63661 0.00046943 -0.13573 -0.00010009 0.50088 0.00036934 737.389993504764 741.397135215236 75.334 0.4827 75.334 75.074 75.557 0 195 42 6 0 0 0 5.2949E-05 1 45319 85.288 85.288 1 1.9742 2.1029 0 36454000 10777000 25677000 36571 555 13816 14193 57316 57316 VDVEALENSAGATYIR 16 0 1 Unmodified _VDVEALENSAGATYIR_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;D6RDY6;O15302 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 854.9302 2 854.431041 1706.84753 67421.38 0.99797 0.0008527 -1.1838 -0.0010115 -0.18588 -0.00015882 854.932200507315 859.935007355837 95.84 0.36412 95.84 95.674 96.038 0 53 31 4 0 0 0 0.0030104 1 58380 38.445 38.445 1 1.9871 2.0226 0 7138500 2027300 5111200 36572 1416 13817 14194 57317 57317 VDVEALENSAGATYIR 16 0 1 Unmodified _VDVEALENSAGATYIR_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;D6RDY6;O15302 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 854.4326 2 854.431041 1706.84753 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.824 1 95.824 95.324 96.324 0 0 0 0 0.011538 1 58329 44.616 27.984 1 36573 1416 13817 14194 57318 57318 VDVEALENSAGATYIR 16 0 1 Unmodified _VDVEALENSAGATYIR_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;D6RDY6;O15302 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 854.4326 2 854.431041 1706.84753 66198.71 0.7551 0.00064518 -0.95735 -0.00081799 -0.20224 -0.0001728 854.430805820071 859.433964873951 109.24 0.41604 109.24 108.99 109.41 7.6294E-06 64 20 4 0 0 0 0.013929 1 62847 31.708 31.708 1 1.22 1.0213 0 3943800 1263600 2680200 36574 1416 13817 14194 57319 57319 VDVEALENSAGATYIR 16 0 1 Unmodified _VDVEALENSAGATYIR_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;D6RDY6;O15302 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 854.4326 2 854.431041 1706.84753 66575.13 0.7186 0.00061399 -0.60569 -0.00051752 0.11291 9.6471E-05 854.932279970252 859.434276147045 109.19 0.49216 109.19 108.98 109.47 0 56 21 5 0 0 0 0.025539 1 61956 25.982 22.48 1 1.4597 1.252 0 3340200 1088200 2252000 36575 1416 13817 14194 57320 57320 VDVEEEFFALR 11 0 1 Unmodified _VDVEEEFFALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.3427 2 677.337892 1352.66123 73250.23 0.59337 0.00040191 -0.4097 -0.00027751 0.18367 0.00012441 677.337874915841 682.341200704281 114.58 1.0575 114.58 114.2 115.26 7.6294E-06 462 71 10 0 0 0 0.00029949 3 72561 88.495 88.495 1 1.3827 1.6047 0 174960000 71970000 102990000 36576 1569 13818 14195 57321;57322;57323 57322 VDVEEEFFALR 11 0 1 Unmodified _VDVEEEFFALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.3423 2 677.337892 1352.66123 73327.37 0.64052 0.00043385 -0.54418 -0.0003686 0.096332 6.5249E-05 677.337899254516 682.34100795089 114.01 1.148 114.01 113.55 114.7 7.6294E-06 518 80 10 0 0 0 0.00042966 3 74535 79.148 63.888 1 1.5337 1.7575 0 173110000 71816000 101290000 36577 1569 13818 14195 57324;57325;57326 57326 VDVEEEFFALR 11 0 1 Unmodified _VDVEEEFFALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 677.3382 2 677.337892 1352.66123 74184.31 0.93993 0.00063665 -0.32091 -0.00021736 0.61902 0.00041929 677.337941154601 682.34129175023 125.9 1.1186 125.9 125.54 126.66 0 272 44 10 0 0 0 7.8974E-05 2 75644 98.044 88.686 1 2.5748 2.1727 0 29054000 7721000 21333000 36578 1569 13818 14195 57327;57328 57328 VDVEEEFFALR 11 0 1 Unmodified _VDVEEEFFALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 682.3427 2 677.337892 1352.66123 73767.7 0.75408 0.00051076 -0.20184 -0.00013672 0.55223 0.00037405 677.338069518047 682.341424012117 125.79 1.0412 125.79 125.42 126.46 0 273 47 10 0 0 0 0.00012288 2 74536 96.143 96.143 1 2.6728 2.3315 0 28996000 7892500 21103000 36579 1569 13818 14195 57329;57330 57329 VDVEEEFFALRK 12 1 1 Unmodified _VDVEEEFFALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.6004 3 494.592675 1480.75619 86072.11 0.39919 0.00019744 -0.14352 -7.0986E-05 0.25567 0.00012645 494.592610719603 500.60002983763 109.39 0.76384 109.39 109.11 109.87 0 160 37 8 0 0 0 0.00093858 1 62991 55.261 55.261 1 3.3248 2.8827 0 16526000 3651600 12874000 36580 1569 13819 14196 57331 57331 VDVEEEFFALRK 12 1 1 Unmodified _VDVEEEFFALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.6003 3 494.592675 1480.75619 84732.7 0.25842 0.00012781 0.11932 5.9014E-05 0.37774 0.00018683 494.592706770657 500.60016094461 109.26 0.78702 109.26 109.02 109.81 0 140 35 8 0 0 0 0.00068874 1 61985 57.802 57.802 1 4.1406 3.5046 0 12261000 2526000 9735300 36581 1569 13819 14196 57332 57332 VDVGGSEPASLSYLSFEGATK 21 1 0 Unmodified _VDVGGSEPASLSYLSFEGATK_ 0 0 0 Q9NQT5;Q9NYS3 Q9NQT5 Q9NQT5 EXOSC3;PNAS-3 Exosome complex component RRP40 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1057.5197 2 1057.51804 2113.02153 58265.51 0.83972 0.00088802 -0.80694 -0.00085335 0.032785 3.4671E-05 1057.51836774367 1062.02653604264 108.87 0.47964 108.87 108.66 109.14 7.6294E-06 188 28 9 0 0 0 8.1521E-11 2 67986 87.566 82.389 1 1.0126 1.0221 0 27349000 15274000 12075000 36582 2061 13820 14197 57333;57334 57333 VDVGGSEPASLSYLSFEGATK 21 1 0 Unmodified _VDVGGSEPASLSYLSFEGATK_ 0 0 0 Q9NQT5;Q9NYS3 Q9NQT5 Q9NQT5 EXOSC3;PNAS-3 Exosome complex component RRP40 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1062.0286 2 1057.51804 2113.02153 58206.72 0.58952 0.00062343 -0.87767 -0.00092815 -0.28815 -0.00030473 1058.02004672194 1062.5228763977 108.36 0.46851 108.36 108.13 108.6 -7.6294E-06 199 30 9 0 0 0 1.521E-08 4 69278 96.414 96.414 1 0.96411 0.97144 0 27029000 13488000 13541000 36583 2061 13820 14197 57335;57336;57337;57338 57336 VDVGGSEPASLSYLSFEGATK 21 1 0 Unmodified _VDVGGSEPASLSYLSFEGATK_ 0 0 0 Q9NQT5;Q9NYS3 Q9NQT5 Q9NQT5 EXOSC3;PNAS-3 Exosome complex component RRP40 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1061.5251 2 1057.51804 2113.02153 58912.17 0.27718 0.00029313 0.4728 0.0005 0.74999 0.00079312 1058.0199220774 1061.52533333259 120.02 0.46317 120.02 119.79 120.25 0 153 20 10 0 0 0 0.0037009 2 71079 39.531 39.531 1 1 0.79214 0 18571000 9189200 9381900 36584 2061 13820 14197 57339;57340 57340 VDVGGSEPASLSYLSFEGATK 21 1 0 Unmodified _VDVGGSEPASLSYLSFEGATK_ 0 0 0 Q9NQT5;Q9NYS3 Q9NQT5 Q9NQT5 EXOSC3;PNAS-3 Exosome complex component RRP40 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1058.0194 2 1057.51804 2113.02153 58149.09 0.31963 0.00033802 0.030117 3.185E-05 0.34975 0.00036987 1058.01951769109 1062.02680255943 119.82 0.50208 119.82 119.62 120.12 -7.6294E-06 148 20 10 0 0 0 2.0581E-08 2 70121 78.69 78.69 1 0.93585 0.74956 0 20344000 9569900 10774000 36585 2061 13820 14197 57341;57342 57342 VDWLTEK 7 1 0 Unmodified _VDWLTEK_ 0 0 0 A0A024R8W0;P38919;A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3QL43;B4DNH2;J3KSZ0;E7EQG2;Q14240;J3KTN0;B4DKP9;Q9NZE6;Q96B07;B4DJX6;J3QL52 A0A024R8W0;A8K7F6 A8K7F6 DDX48;EIF4A3;EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 449.742 2 445.734543 889.454533 90158.46 0.14195 6.3271E-05 0.74181 0.00033065 0.88376 0.00039392 445.734636383383 449.742027701309 59.786 0.72464 59.786 59.468 60.192 3.8147E-06 275 59 6 0 0 0 0.026686 1 34864 76.134 56.572 1 1.7585 1.9656 0 100550000 37151000 63402000 36586 770;261 13821 14198 57343 57343 VDYSGGFEPFSVLR 14 0 1 Unmodified _VDYSGGFEPFSVLR_ 0 0 0 Q05D78;F8W7U8;A0A024R395;P49959 Q05D78 Q05D78 MRE11A Double-strand break repair protein MRE11A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 791.8932 2 786.888281 1571.76201 NaN NaN NaN -0.19621 -0.0001544 NaN NaN NaN NaN 116.39 0.42104 116.39 116.14 116.56 0 0 0 0 0.037217 1 74241 40.589 33.9 1 NaN NaN 0 4474400 0 4474400 36587 131 13822 14199 57344 57344 VDYSGGFEPFSVLR 14 0 1 Unmodified _VDYSGGFEPFSVLR_ 0 0 0 Q05D78;F8W7U8;A0A024R395;P49959 Q05D78 Q05D78 MRE11A Double-strand break repair protein MRE11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.8885 2 786.888281 1571.76201 69973.46 1.0018 0.00078833 -0.32505 -0.00025578 0.67678 0.00053255 787.389628272195 791.892304599136 115.84 0.48964 115.84 115.59 116.08 7.6294E-06 106 32 4 0 0 0 0.0002091 2 75650 85.813 85.813 1 0.76162 0.74949 0 14446000 8349700 6095800 36588 131 13822 14199 57345;57346 57346 VEAAGPGGESEPTGSGGTLAHTPR 24 0 1 Unmodified _VEAAGPGGESEPTGSGGTLAHTPR_ 0 0 0 Q9UMN6 Q9UMN6 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 749.0294 3 745.692727 2234.05635 70754.47 0.8255 0.00061557 -0.19632 -0.00014639 0.62918 0.00046918 746.026641740389 749.028773065141 45.303 0.54861 45.303 44.931 45.479 0 117 37 5 0 0 0 0.0012473 3 21098 24.459 24.459 1 1.4952 1.2856 0 2789900 1273200 1516700 36589 2113 13823 14200 57347;57348;57349 57348 VEAFDNEFEATQK 13 1 0 Unmodified _VEAFDNEFEATQK_ 0 0 0 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.3596 2 764.351728 1526.6889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.031 1 67.031 66.531 67.531 0 0 0 0 0.0047936 1 38709 59.198 40.887 1 36590 103 13824 14201 57350 57350 VEAFDNEFEATQK 13 1 0 Unmodified _VEAFDNEFEATQK_ 0 0 0 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.3566 2 764.351728 1526.6889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.105 1 67.105 66.605 67.605 0 0 0 0 0.0081803 1 38764 55.452 37.141 1 36591 103 13824 14201 57351 57351 VEAFEHR 7 0 1 Unmodified _VEAFEHR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 449.226 2 444.222134 886.429715 101946.6 -0.42803 -0.00019014 -1.4566 -0.00064706 -1.8846 -0.0008372 444.221136158902 449.226048366764 18.641 0.235 18.641 18.476 18.711 0 29 9 4 0 0 0 0.02687 2 5566 81.784 73.63 1 0.91239 0.94529 0 10356000 5209800 5146600 36592 1563 13825 14202 57352;57353 57352 VEAGDVIYIEANSGAVK 17 1 0 Unmodified _VEAGDVIYIEANSGAVK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.4561 2 867.949066 1733.88358 NaN NaN NaN -0.50262 -0.00043625 NaN NaN NaN NaN 89.948 0.24362 89.948 89.858 90.102 0 0 0 0 8.6785E-05 1 54318 70.412 55.21 1 NaN NaN 0 5805000 0 5805000 36593 1076 13826 14203 57354 57354 VEAGDVIYIEANSGAVK 17 1 0 Unmodified _VEAGDVIYIEANSGAVK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 867.9518 2 867.949066 1733.88358 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.155 1 90.155 89.655 90.655 7.6294E-06 0 0 0 0.0029442 1 54453 53.967 32.094 1 36594 1076 13826 14203 57355 57355 VEAGDVIYIEANSGAVK 17 1 0 Unmodified _VEAGDVIYIEANSGAVK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.4485 2 867.949066 1733.88358 68762.37 0.73043 0.00063398 -0.2126 -0.00018453 0.51783 0.00044945 867.949253491372 871.955748976641 89.038 0.50931 89.038 88.798 89.308 7.6294E-06 99 42 4 0 0 0 0.001698 1 55099 39.016 39.016 1 0.89567 0.91267 0 17035000 8576200 8458900 36595 1076 13826 14203 57356 57356 VEAGDVIYIEANSGAVK 17 1 0 Unmodified _VEAGDVIYIEANSGAVK_ 0 0 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7;H7C4I3 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 871.9555 2 867.949066 1733.88358 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.159 1 89.159 88.659 89.659 0 0 0 0 1.459E-08 1 55019 106.32 85.094 1 36596 1076 13826 14203 57357 57357 VEAGVLK 7 1 0 Unmodified _VEAGVLK_ 0 0 0 Q53HR1 Q53HR1 Q53HR1 Elongation factor 1-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 362.2288 2 358.221072 714.42759 106569 0.38463 0.00013778 0.11017 3.9466E-05 0.4948 0.00017725 358.220904438361 362.228322622547 33.13 0.51994 33.13 32.912 33.432 -3.8147E-06 176 51 5 0 0 0 0.032919 1 16543 64.776 2.7792 1 0.82341 0.81014 0 19890000 11721000 8169800 36597 1790 13827 14204 57358 57358 VEAIDVEEAK 10 1 0 Unmodified _VEAIDVEEAK_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.7853 2 551.784961 1101.55537 79265.34 0.76204 0.00042048 0.09566 5.2784E-05 0.8577 0.00047326 551.785465587269 555.791992984286 45.38 0.19625 45.38 45.243 45.439 0 38 15 3 0 0 0 0.007051 1 24459 57.96 40.574 1 2.5303 2.5848 0 28270000 7116000 21154000 36598 235 13828 14205 57359 57359 VEAIDVEEAK 10 1 0 Unmodified _VEAIDVEEAK_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.7859 2 551.784961 1101.55537 81912.41 0.7418 0.00040931 -0.44105 -0.00024336 0.30075 0.00016595 552.285892152563 556.293304673098 44.758 0.65337 44.758 44.399 45.053 3.8147E-06 165 51 7 0 0 0 0.00091667 1 24340 79.148 60.923 1 0.93686 1.0121 0 22571000 15528000 7042300 36599 235 13828 14205 57360 57360 VEAKPEVQSQPPR 13 1 1 Unmodified _VEAKPEVQSQPPR_ 0 0 1 A0A024RDB2;A0A024RDE5;Q9UN86;A8K6V7 A0A024RDB2 A0A024RDB2 G3BP2 Ras GTPase-activating protein-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.8944 2 732.893897 1463.77324 72574.96 0.35868 0.00026287 -0.028644 -2.0993E-05 0.33003 0.00024188 732.893797140056 741.904962526795 21.452 0.19894 21.452 21.408 21.607 0 18 8 4 0 0 0 0.012128 2 7634 47.559 47.559 1 3.2262 3.5649 0 7063900 1370800 5693000 36600 382 13829 14206 57361;57362 57361 VEALPEQVAPESR 13 0 1 Unmodified _VEALPEQVAPESR_ 0 0 0 A0A024R7E0;Q96RE7 A0A024R7E0 A0A024R7E0 BTBD14B;NACC1 Nucleus accumbens-associated protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.8772 2 712.87263 1423.73071 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.745 1 59.745 59.245 60.245 0 0 0 0 0.011838 1 34792 53.013 33.659 1 36601 221 13830 14207 57363 57363 VEALTKEELEFEVPFR 16 1 1 Unmodified _VEALTKEELEFEVPFR_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.3421 3 646.006924 1934.99894 77209.59 1.0232 0.00066101 -0.074417 -4.8074E-05 0.9488 0.00061293 646.006636243384 652.014438817899 119.45 0.46007 119.45 119.27 119.73 -7.6294E-06 90 18 8 0 0 0 0.00033787 1 70689 48.216 43.214 1 1.0041 0.83199 0 5702700 2862300 2840400 36602 2148 13831 14208 57364 57364 VEALTKEELEFEVPFR 16 1 1 Unmodified _VEALTKEELEFEVPFR_ 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.0076 3 646.006924 1934.99894 77867.54 0.7009 0.00045278 -0.20552 -0.00013277 0.49537 0.00032001 646.341124778344 652.349022212839 119.23 0.44036 119.23 119.03 119.47 -7.6294E-06 83 18 7 0 0 0 1.2588E-06 1 69625 91.457 86.555 1 1.0622 0.88965 0 5893000 3016400 2876600 36603 2148 13831 14208 57365 57365 VEAPEYIPISDDPK 14 1 0 Unmodified _VEAPEYIPISDDPK_ 0 0 0 Q1ED39;H3BPL4 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 790.9 2 786.893229 1571.7719 67442.44 0.62352 0.00049064 -1.0431 -0.00082081 -0.41959 -0.00033017 787.3922929684 790.900006463845 97.878 0.90185 97.878 97.647 98.549 7.6294E-06 254 59 8 0 0 0 0.00023944 1 55200 63.727 63.727 1 1.5297 1.2276 0 7645000 3024600 4620400 36604 1775 13832 14209 57366 57366 VEAPEYIPISDDPK 14 1 0 Unmodified _VEAPEYIPISDDPK_ 0 0 0 Q1ED39;H3BPL4 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 790.9009 2 786.893229 1571.7719 68647.64 0.62726 0.00049359 -0.11649 -9.1668E-05 0.51077 0.00040192 786.892567282416 791.404124146288 97.773 1.1983 97.773 97.347 98.545 0 247 71 8 0 0 0 0.00015258 3 54308 76.332 76.332 1 1.6774 1.3662 0 7409400 2383400 5025900 36605 1775 13832 14209 57367;57368;57369 57367 VEAQLQELQVK 11 1 0 Unmodified _VEAQLQELQVK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8618 2 642.861534 1283.70852 76618.52 0.61137 0.00039302 -0.043365 -2.7878E-05 0.568 0.00036515 642.861282264682 646.868482120752 68.855 0.57941 68.855 68.603 69.182 0 279 50 8 0 0 0 1.255E-40 2 39892 188.87 158.08 1 1.7249 1.9439 0 114570000 39690000 74881000 36606 81 13833 14210 57370;57371 57371 VEAQLQELQVK 11 1 0 Unmodified _VEAQLQELQVK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.8688 2 642.861534 1283.70852 76383.92 0.54358 0.00034944 0.0090029 5.7876E-06 0.55258 0.00035523 642.861356637672 646.868528012648 67.66 0.4966 67.66 67.449 67.946 0 236 42 8 0 0 0 5.1308E-23 2 40035 169.65 146.28 1 1.7462 1.9517 0 98096000 34475000 63621000 36607 81 13833 14210 57372;57373 57372 VEAQLQELQVK 11 1 0 Unmodified _VEAQLQELQVK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.8686 2 642.861534 1283.70852 NaN NaN NaN -0.13288 -8.5425E-05 NaN NaN NaN NaN 78.945 0.8334 78.945 78.71 79.543 0 0 0 0 0.0023284 1 42381 75.652 66.694 1 NaN NaN 0 10986000 0 10986000 36608 81 13833 14210 57374 57374 VEAQLQELQVK 11 1 0 Unmodified _VEAQLQELQVK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.8685 2 642.861534 1283.70852 75880.8 0.53706 0.00034525 0.18644 0.00011986 0.7235 0.00046511 642.861653930759 646.868641549215 79.241 0.84244 79.241 78.852 79.694 7.6294E-06 212 50 8 0 0 0 0.0040982 1 41660 58.63 58.63 1 2.7483 2.2704 0 11583000 3070500 8512500 36609 81 13833 14210 57375 57375 VEAQVYILSK 10 1 0 Unmodified _VEAQVYILSK_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.3364 2 575.329339 1148.64412 80533.55 0.46925 0.00026997 0.54062 0.00031104 1.0099 0.00058101 575.329732078118 579.336325135235 74.368 1.0395 74.368 73.793 74.833 0 303 90 6 0 0 0 0.0038105 2 43387 62.823 40.737 1 1.3772 1.4806 0 38890000 16311000 22580000 36610 1580 13834 14211 57376;57377 57376 VEAQVYILSK 10 1 0 Unmodified _VEAQVYILSK_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3372 2 575.329339 1148.64412 81376.05 0.78357 0.00045081 0.24479 0.00014084 1.0284 0.00059165 575.329446840166 579.336184706432 73.115 1.101 73.115 72.52 73.621 -7.6294E-06 332 95 6 0 0 0 0.0088882 1 43601 55.461 39.259 1 1.5593 1.7375 0 51734000 17593000 34141000 36611 1580 13834 14211 57378 57378 VEAQVYILSK 10 1 0 Unmodified _VEAQVYILSK_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.3382 2 575.329339 1148.64412 79237.86 0.56569 0.00032546 0.78205 0.00044994 1.3477 0.00077539 575.329717309017 579.336476240024 84.739 0.92755 84.739 84.188 85.115 0 224 66 5 0 0 0 0.0022162 2 45391 70.1 48.014 1 1.0968 0.89709 0 5518300 2301300 3217000 36612 1580 13834 14211 57379;57380 57379 VEASSLPEVR 10 0 1 Unmodified _VEASSLPEVR_ 0 0 0 Q4G0J3;D6RFF0;H0YA82 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.7934 2 543.793121 1085.57169 NaN NaN NaN -0.95154 -0.00051744 NaN NaN NaN NaN 50.389 0.36333 50.389 50.152 50.515 0 0 0 0 0.021646 1 27718 54.191 18.311 1 NaN NaN 0 3609600 3609600 0 36613 1779 13835 14212 57381 57381 VEASSLPEVR 10 0 1 Unmodified _VEASSLPEVR_ 0 0 0 Q4G0J3;D6RFF0;H0YA82 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.7974 2 543.793121 1085.57169 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.322 1 50.322 49.822 50.822 0 0 0 0 5.6389E-05 1 27768 85.731 41.923 1 36614 1779 13835 14212 57382 57382 VEASSLPEVR 10 0 1 Unmodified _VEASSLPEVR_ 0 0 0 Q4G0J3;D6RFF0;H0YA82 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.793 2 543.793121 1085.57169 NaN NaN NaN -0.1602 -8.7117E-05 NaN NaN NaN NaN 49.063 0.44294 49.063 48.928 49.371 0 0 0 0 0.027809 1 27556 52.579 26.842 1 NaN NaN 0 8503600 8503600 0 36615 1779 13835 14212 57383 57383 VEAYQWSVSEGR 12 0 1 Unmodified _VEAYQWSVSEGR_ 0 0 0 Q9Y263;E5RIM3;H0YBW4 Q9Y263 Q9Y263 PLAA Phospholipase A-2-activating protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.8393 2 705.836048 1409.65754 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.077 1 64.077 63.577 64.577 0 0 0 0 0.0081238 1 36790 59.426 31.684 1 36616 2123 13836 14213 57384 57384 VECVLAELK 9 1 0 Unmodified _VECVLAELK_ 0 0 0 Q9Y4W2;B3KUJ7 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7892 2 530.788992 1059.56343 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.339 1 77.339 76.839 77.839 -7.6294E-06 0 0 0 0.051287 1 46772 46.158 20.421 1 36617 2146 13837 14214 57385 57385 VEDAADSATKPENLSSK 17 2 0 Unmodified _VEDAADSATKPENLSSK_ 0 0 1 P46013;Q70L74 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 881.4282 2 881.428695 1760.84284 63844.2 0.24592 0.00021676 0.017337 1.5281E-05 0.26325 0.00023204 881.428736904115 889.442905952788 24.782 0.48325 24.782 24.566 25.05 -1.9073E-06 112 24 10 0 0 0 2.2211E-56 2 10440 220.46 220.46 1 1.7749 2.0945 0 127020000 42979000 84037000 36618 1569 13838 14215 57386;57387 57387 VEDAADSATKPENLSSK 17 2 0 Unmodified _VEDAADSATKPENLSSK_ 0 0 1 P46013;Q70L74 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.9553 3 587.954889 1760.84284 78134.44 0.29946 0.00017607 -0.099173 -5.8309E-05 0.20029 0.00011776 588.289266321035 593.297750917503 24.782 0.69439 24.782 24.393 25.088 -1.9073E-06 164 32 9 0 0 0 2.7188E-18 1 10451 129.32 129.32 1 1.8648 2.1997 0 297180000 103720000 193470000 36619 1569 13838 14215 57388 57388 VEDAADSATKPENLSSK 17 2 0 Unmodified _VEDAADSATKPENLSSK_ 0 0 1 P46013;Q70L74 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 889.9435 2 881.428695 1760.84284 64832.14 0.51748 0.00045612 0.07578 6.6795E-05 0.59326 0.00052291 881.42860044464 889.443091298163 24.585 0.37395 24.585 24.439 24.813 0 115 18 10 0 0 0 2.9654E-44 2 10244 166.03 166.03 1 2.0523 2.3829 0 100920000 33188000 67729000 36620 1569 13838 14215 57389;57390 57389 VEDAADSATKPENLSSK 17 2 0 Unmodified _VEDAADSATKPENLSSK_ 0 0 1 P46013;Q70L74 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.2907 3 587.954889 1760.84284 78041.21 0.73265 0.00043077 -0.18653 -0.00010967 0.54612 0.0003211 587.954930959075 593.631760006814 24.625 0.61612 24.625 24.422 25.038 1.9073E-06 125 28 7 0 0 0 3.0832E-07 1 10263 94.01 94.01 1 1.5286 1.7804 0 223760000 97622000 126140000 36621 1569 13838 14215 57391 57391 VEDAADSATKPENLSSK 17 2 0 Unmodified _VEDAADSATKPENLSSK_ 0 0 1 P46013;Q70L74 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 587.9553 3 587.954889 1760.84284 78488.32 0.49641 0.00029187 -0.063186 -3.715E-05 0.43323 0.00025472 587.955112893933 593.297668616395 28.208 1.0641 28.208 27.585 28.649 0 289 49 11 0 0 0 0.0045936 1 11146 31.801 31.801 1 4.0027 3.3932 0 60818000 12808000 48010000 36622 1569 13838 14215 57392 57392 VEDAADSATKPENLSSK 17 2 0 Unmodified _VEDAADSATKPENLSSK_ 0 0 1 P46013;Q70L74 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.6319 3 587.954889 1760.84284 78004.18 0.19348 0.00011376 -0.07316 -4.3015E-05 0.12032 7.0745E-05 587.95511396689 593.297614053158 28.625 0.79446 28.625 28.238 29.032 0 296 46 11 0 0 0 0.00058189 1 11052 30.107 30.107 1 3.976 3.3897 0 50490000 10224000 40266000 36623 1569 13838 14215 57393 57393 VEDFTQNPR 9 0 1 Unmodified _VEDFTQNPR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.2719 2 553.26727 1104.51999 82616 0.24787 0.00013714 0.27298 0.00015103 0.52085 0.00028817 553.267492956522 558.27149673649 31.681 0.42769 31.681 31.462 31.89 1.9073E-06 83 23 6 0 0 0 0.0042933 2 13448 69.628 62.148 1 1.0825 0.90817 0 4169600 1907100 2262400 36624 1897 13839 14216 57394;57395 57394 VEDFTQNPR 9 0 1 Unmodified _VEDFTQNPR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.2674 2 553.26727 1104.51999 82392.13 0.55386 0.00030643 -1.7726 -0.00098073 -1.2188 -0.0006743 553.2673465579 558.271559928974 31.924 0.70523 31.924 31.603 32.308 -1.9073E-06 170 38 7 0 0 0 0.008633 2 13045 60.91 44.708 1 1.1031 0.94702 0 2812800 1383000 1429800 36625 1897 13839 14216 57396;57397 57396 VEDLFLTFAK 10 1 0 Unmodified _VEDLFLTFAK_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.8243 2 591.823889 1181.63323 80814.61 0.7407 0.00043836 -0.63489 -0.00037574 0.10581 6.262E-05 591.823655709115 595.830533763475 112.8 0.53522 112.8 112.56 113.09 0 110 35 4 0 0 0 0.0016591 2 73001 72.643 65.92 1 1.5594 1.6324 0 10525000 3335500 7189200 36626 523 13840 14217 57398;57399 57399 VEDLTFTSPFCLQVK 15 1 0 Unmodified _VEDLTFTSPFCLQVK_ 0 0 0 E9PKG1;Q5U8W9;H7C2I1;Q99873;A0A087X1W2 E9PKG1 E9PKG1 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.9596 2 892.450388 1782.88622 64937.14 0.60896 0.00054347 0.44621 0.00039822 1.0552 0.00094168 892.450745977703 896.959018905706 131.74 0.65579 131.74 131.3 131.95 0 97 30 6 0 0 0 0.036982 1 80023 24.696 24.253 1 0.94209 0.7569 0 2842800 1429400 1413400 36627 1243 13841 14218 57400 57400 VEDMAELTCLNEASVLHNLK 20 1 0 Oxidation (M) _VEDM(ox)AELTCLNEASVLHNLK_ VEDM(1)AELTCLNEASVLHNLK VEDM(65.25)AELTCLNEASVLHNLK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99;E7ERA5;G1UI33;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 770.7115 3 768.039971 2301.09808 69346.37 0.92748 0.00071235 -0.54799 -0.00042088 0.37949 0.00029147 768.372888794783 771.045430881629 111.92 0.39531 111.92 111.75 112.15 0 160 25 9 0 0 0 6.7959E-07 1 64879 65.25 65.25 1 2.2006 1.7802 0 23166000 6811400 16354000 36628 81;1544 13842 14219 57401 57401 74 VEDMAELTCLNEASVLHNLK 20 1 0 Oxidation (M) _VEDM(ox)AELTCLNEASVLHNLK_ VEDM(1)AELTCLNEASVLHNLK VEDM(108.92)AELTCLNEASVLHNLK 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99;E7ERA5;G1UI33;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 770.7124 3 768.039971 2301.09808 68804.61 0.77651 0.00059639 -0.39358 -0.00030229 0.38293 0.00029411 768.373517188469 770.711166148246 111.78 0.40083 111.78 111.57 111.98 0 137 24 9 0 0 0 1.0017E-13 2 63864 108.92 108.92 1 2.4004 1.9287 0 16235000 5283600 10952000 36629 81;1544 13842 14219 57402;57403 57402 74 VEDMAELTCLNEASVLHNLK 20 1 0 Unmodified _VEDMAELTCLNEASVLHNLK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99;E7ERA5;G1UI33;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.7146 3 762.708332 2285.10317 68703.62 0.83526 0.00063706 -0.59062 -0.00045047 0.24465 0.00018659 763.042331060637 765.379525276589 121.27 0.43635 121.27 121.05 121.48 0 73 19 7 0 0 0 2.0595E-07 1 72151 81.356 81.356 1 3.4997 2.806 0 7483900 1658500 5825500 36630 81;1544 13842 14220 57404 57404 VEDMAELTCLNEASVLHNLK 20 1 0 Unmodified _VEDMAELTCLNEASVLHNLK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;Q5BKV1;B1AH99;E7ERA5;G1UI33;P35580 A0A024R1N1;P35580 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.7147 3 762.708332 2285.10317 71543.17 0.87109 0.00066439 -0.14852 -0.00011328 0.72257 0.00055111 763.043287182951 765.714063499949 121.06 0.36407 121.06 120.87 121.23 -7.6294E-06 73 16 8 0 0 0 1.7238E-06 1 71085 55.763 55.763 1 3.9315 3.2493 0 11896000 2188200 9708000 36631 81;1544 13842 14220 57405 57405 VEDPTFLNQLQSGVNR 16 0 1 Unmodified _VEDPTFLNQLQSGVNR_ 0 0 0 Q14204;B4DSR6 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 914.4684 2 908.963039 1815.91153 NaN NaN NaN -1.1128 -0.0010115 NaN NaN NaN NaN 98.226 0.39992 98.226 98.051 98.451 0 0 0 0 2.5208E-05 1 61412 79.492 69.44 1 NaN NaN 0 5427600 0 5427600 36632 1729 13843 14221 57406 57406 VEDQELPTQPEAPDEHQDMDADPGGPEFLK 30 1 0 Oxidation (M) _VEDQELPTQPEAPDEHQDM(ox)DADPGGPEFLK_ VEDQELPTQPEAPDEHQDM(1)DADPGGPEFLK VEDQELPTQPEAPDEHQDM(51.54)DADPGGPEFLK 0 1 0 Q4VC44;I3L188;J3KNW1;B3KRZ0 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1120.8326 3 1117.4929 3349.45686 58114.53 0.26644 0.00029775 -0.27441 -0.00030665 -0.007966 -8.902E-06 1117.82695962953 1120.83247303864 85.588 0.56766 85.588 85.263 85.831 0 211 42 9 0 0 0 4.6785E-11 1 52678 51.539 51.539 1 1.129 1.1384 0 28126000 16164000 11962000 36633 1781 13844 14222 57407 57407 1649 VEDSTMPIRR 10 0 2 Oxidation (M) _VEDSTM(ox)PIRR_ VEDSTM(1)PIRR VEDSTM(43.08)PIRR 0 1 1 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.3171 2 610.308612 1218.60267 75735.45 0.44081 0.00026903 -0.081371 -4.9661E-05 0.35944 0.00021937 610.308693258173 620.316633018895 17.707 0.30429 17.707 17.535 17.84 0 54 10 8 0 0 0 0.011666 1 4776 43.083 35.151 1 0.79778 0.86219 0 20147000 10724000 9422900 36634 1817 13845 14223 57408 57408 1677 VEDSTMPIRR 10 0 2 Oxidation (M) _VEDSTM(ox)PIRR_ VEDSTM(1)PIRR VEDSTM(50.04)PIRR 0 1 1 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.3167 2 610.308612 1218.60267 76130.42 0.16949 0.00010344 0.079612 4.8588E-05 0.2491 0.00015203 610.308817106271 620.316714505831 17.662 0.40235 17.662 17.486 17.888 0 76 15 8 0 0 0 0.029706 1 4531 50.04 50.04 1 0.85408 0.9499 0 24452000 13890000 10563000 36635 1817 13845 14223 57409 57409 1677 VEDVSAVEIVGGATR 15 0 1 Unmodified _VEDVSAVEIVGGATR_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.3972 2 751.39647 1500.77839 NaN NaN NaN -0.72016 -0.00054113 NaN NaN NaN NaN 83.676 0.60743 83.676 83.42 84.028 0 0 0 0 1.1284E-05 1 50130 90.926 71.655 1 NaN NaN 0 11017000 11017000 0 36636 390 13846 14224 57410 57410 VEDVSAVEIVGGATR 15 0 1 Unmodified _VEDVSAVEIVGGATR_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.3974 2 751.39647 1500.77839 NaN NaN NaN -0.84068 -0.00063168 NaN NaN NaN NaN 82.705 0.60902 82.705 82.494 83.103 0 0 0 0 3.3575E-05 1 50709 86.288 58.667 1 NaN NaN 0 10323000 10323000 0 36637 390 13846 14224 57411 57411 VEDVSAVEIVGGATR 15 0 1 Unmodified _VEDVSAVEIVGGATR_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.4016 2 751.39647 1500.77839 NaN NaN NaN -1.3602 -0.001022 NaN NaN NaN NaN 95.87 0.64956 95.87 95.674 96.324 -7.6294E-06 0 0 0 0.001204 1 53708 66.393 57.811 1 NaN NaN 0 2558700 0 2558700 36638 390 13846 14224 57412 57412 VEDVSAVEIVGGATR 15 0 1 Unmodified _VEDVSAVEIVGGATR_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.3981 2 751.39647 1500.77839 68891.88 0.39713 0.0002984 -0.029782 -2.2378E-05 0.36735 0.00027602 751.395976617745 756.400754931581 95.9 0.57542 95.9 95.596 96.172 7.6294E-06 161 37 6 0 0 0 0.00022178 2 52878 66.498 57.065 1 1.4519 1.2818 0 3665700 1489700 2176000 36639 390 13846 14224 57413;57414 57413 VEEAEPEEFVVEK 13 1 0 Unmodified _VEEAEPEEFVVEK_ 0 0 0 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.3774 2 767.369586 1532.72462 73106.34 0.58913 0.00045208 0.99894 0.00076655 1.5881 0.0012186 767.369551846091 771.376831514432 72.93 0.66502 72.93 72.563 73.228 0 259 53 8 0 0 0 0.0001555 2 42603 85.813 71.394 1 0.9501 1.0238 0 33840000 19217000 14623000 36640 662 13847 14225 57415;57416 57416 VEEAEPEEFVVEK 13 1 0 Unmodified _VEEAEPEEFVVEK_ 0 0 0 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 771.3788 2 767.369586 1532.72462 72211.24 0.62384 0.00047871 0.41843 0.00032109 1.0423 0.00079981 767.369709905983 771.377201401197 71.809 0.69215 71.809 71.489 72.181 0 182 58 6 0 0 0 0.00015285 1 43016 88.187 64.336 1 0.9957 1.0111 0 29916000 11226000 18690000 36641 662 13847 14225 57417 57417 VEEAEPEEFVVEK 13 1 0 Unmodified _VEEAEPEEFVVEK_ 0 0 0 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.8725 2 767.369586 1532.72462 72006.69 0.5439 0.00041737 0.50852 0.00039022 1.0524 0.00080759 767.369603071036 771.376921182765 83.526 0.62632 83.526 83.209 83.835 7.6294E-06 169 42 5 0 0 0 0.00036096 2 45567 71.153 56.181 1 1.1391 0.90137 0 6214900 2921200 3293700 36642 662 13847 14225 57418;57419 57419 VEEAIVAR 8 0 1 Unmodified _VEEAIVAR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.7524 2 443.753267 885.491981 NaN NaN NaN -0.40195 -0.00017837 NaN NaN NaN NaN 31.588 1.1414 31.588 30.992 32.133 1.9073E-06 0 0 0 0.00047696 1 15393 116.54 32.928 1 NaN NaN 0 33069000 33069000 0 36643 1750 13848 14226 57420 57420 VEEAIVAR 8 0 1 Unmodified _VEEAIVAR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.7577 2 443.753267 885.491981 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.132 1 31.132 30.632 31.632 -1.9073E-06 0 0 0 0.0066879 1 15332 81.297 18.582 1 36644 1750 13848 14226 57421 57421 VEEAIVAR 8 0 1 Unmodified _VEEAIVAR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.7574 2 443.753267 885.491981 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.166 1 31.166 30.666 31.666 0 0 0 0 0.0041951 1 15354 91.906 22.991 1 36645 1750 13848 14226 57422 57422 VEEAIVAR 8 0 1 Unmodified _VEEAIVAR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.7527 2 443.753267 885.491981 92502.8 0.013502 5.9917E-06 -0.45266 -0.00020087 -0.43915 -0.00019488 443.75290925596 448.75724700733 31.184 0.97555 31.184 30.519 31.495 0 369 84 6 0 0 0 0.0019305 2 15183 104.45 30.032 1 0.83745 0.95416 0 133820000 68795000 65030000 36646 1750 13848 14226 57423;57424 57423 VEEAIVAR 8 0 1 Unmodified _VEEAIVAR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 448.7574 2 443.753267 885.491981 90578.38 -0.15297 -6.7881E-05 -0.046024 -2.0423E-05 -0.19899 -8.8304E-05 443.753118335271 448.75731678835 35.604 0.80114 35.604 35.319 36.12 0 319 64 6 0 0 0 0.022274 1 15789 57.281 18.475 1 0.94883 0.79634 0 10017000 5328800 4688600 36647 1750 13848 14226 57425 57425 VEEAIVAR 8 0 1 Unmodified _VEEAIVAR_ 0 0 0 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 448.758 2 443.753267 885.491981 90186.96 0.16913 7.5051E-05 -0.46256 -0.00020526 -0.29343 -0.00013021 443.752906011109 448.757192700603 35.617 0.72308 35.617 35.306 36.029 3.8147E-06 277 61 6 0 0 0 0.014589 1 15284 62.659 9.1042 1 0.93725 0.76296 0 12504000 7030100 5473700 36648 1750 13848 14226 57426 57426 VEEEGSPGDPDHEASTQGR 19 0 1 Unmodified _VEEEGSPGDPDHEASTQGR_ 0 0 0 Q6PK21;A0A0A0MRN5;Q05BV5;Q9NZT2;B3KMQ6;V9H0E3 Q6PK21 Q6PK21 OGFR Opioid growth factor receptor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.6242 3 666.287478 1995.84061 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.221 1 18.221 17.721 18.721 1.9073E-06 0 0 0 0.0046371 1 4955 54.974 49.869 1 36649 469 13849 14227 57427 57427 VEEISPNIR 9 0 1 Unmodified _VEEISPNIR_ 0 0 0 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.7919 2 528.787838 1055.56112 84961.39 0.48689 0.00025746 0.14771 7.8107E-05 0.6346 0.00033557 528.787969672145 533.791697337624 48.568 0.42965 48.568 48.311 48.741 0 105 31 5 0 0 0 0.0028653 2 26460 84.568 54.383 1 0.99379 1.0194 0 25825000 14031000 11794000 36650 2101 13850 14228 57428;57429 57429 VEEISPNIR 9 0 1 Unmodified _VEEISPNIR_ 0 0 0 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.7886 2 528.787838 1055.56112 83291.59 0.84398 0.00044628 0.61331 0.00032431 1.4573 0.0007706 528.787917455738 533.791957313592 47.352 0.35757 47.352 47.193 47.55 0 74 23 5 0 0 0 0.0015501 2 26242 95.531 69.794 1 0.94348 0.99291 0 23163000 12109000 11054000 36651 2101 13850 14228 57430;57431 57430 VEEISPNIR 9 0 1 Unmodified _VEEISPNIR_ 0 0 0 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.7923 2 528.787838 1055.56112 82195.38 0.42421 0.00022431 0.20464 0.00010821 0.62884 0.00033252 528.787994711925 533.791933385651 55.806 0.45925 55.806 55.562 56.021 3.8147E-06 84 29 5 0 0 0 0.0091583 1 28042 60.436 35.514 1 1.9762 1.7513 0 1525800 518340 1007500 36652 2101 13850 14228 57432 57432 VEEISPNIR 9 0 1 Unmodified _VEEISPNIR_ 0 0 0 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 528.7885 2 528.787838 1055.56112 85901.14 0.43917 0.00023223 0.10561 5.5844E-05 0.54478 0.00028807 528.788115513722 533.792029247487 56.229 0.42842 56.229 56.017 56.445 0 85 28 4 0 0 0 0.030087 2 27760 53.968 31.837 1 1.5523 1.3503 0 1546400 642110 904320 36653 2101 13850 14228 57433;57434 57434 VEEQEPELTSTPNFVVEVIK 20 1 0 Unmodified _VEEQEPELTSTPNFVVEVIK_ 0 0 0 A8K651;Q07021;I3L3Q7;I3L3B0 A8K651 A8K651 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1144.5916 2 1144.08883 2286.16311 56601.43 0.21669 0.00024791 0.56165 0.00064258 0.77834 0.00089049 1144.59142141479 1148.59805533632 119.91 0.48692 119.91 119.68 120.17 -7.6294E-06 201 33 9 0 0 0 5.2865E-06 3 77132 59.709 59.709 1 1.9774 2.1238 0 39318000 12653000 26664000 36654 756 13851 14229 57435;57436;57437 57437 VEEQEPELTSTPNFVVEVIK 20 1 0 Unmodified _VEEQEPELTSTPNFVVEVIK_ 0 0 0 A8K651;Q07021;I3L3Q7;I3L3B0 A8K651 A8K651 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1148.0955 2 1144.08883 2286.16311 56425.85 0.30701 0.00035125 0.12651 0.00014474 0.43353 0.000496 1144.59068881732 1148.09557805733 119.43 0.46532 119.43 119.22 119.68 0 225 33 9 0 0 0 1.3842E-06 2 78658 91.812 91.812 1 1.9662 2.1318 0 39008000 14049000 24959000 36655 756 13851 14229 57438;57439 57438 VEEQEPELTSTPNFVVEVIK 20 1 0 Unmodified _VEEQEPELTSTPNFVVEVIK_ 0 0 0 A8K651;Q07021;I3L3Q7;I3L3B0 A8K651 A8K651 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1144.5891 2 1144.08883 2286.16311 57558.02 0.50301 0.00057549 0.016444 1.8814E-05 0.51945 0.0005943 1144.59022465912 1148.5975956393 132.46 0.41852 132.46 132.29 132.71 0 140 18 10 0 0 0 7.671E-05 2 80526 45.33 45.33 1 0.88885 0.68889 0 13560000 6868700 6691100 36656 756 13851 14229 57440;57441 57441 VEEQEPELTSTPNFVVEVIK 20 1 0 Unmodified _VEEQEPELTSTPNFVVEVIK_ 0 0 0 A8K651;Q07021;I3L3Q7;I3L3B0 A8K651 A8K651 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1144.5928 2 1144.08883 2286.16311 58180.82 0.69213 0.00079186 -0.17869 -0.00020444 0.51345 0.00058743 1144.59004813749 1148.59739407718 132.25 0.47064 132.25 132.07 132.54 0 124 20 9 0 0 0 9.7198E-09 2 79517 87.519 87.519 1 0.89084 0.73482 0 12027000 6711500 5315700 36657 756 13851 14229 57442;57443 57443 VEEVLEEEEEEYVVEK 16 1 0 Unmodified _VEEVLEEEEEEYVVEK_ 0 0 0 B5MD17;J3KS05;Q6IBN6;P83916;K7ELA4;C9JWS9 B5MD17 B5MD17 CBX1 Chromobox protein homolog 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 994.9689 2 990.962233 1979.90991 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.745 1 87.745 87.245 88.245 0 0 0 0 0.027673 1 54099 42.031 21.824 1 36658 1081 13852 14230 57444 57444 VEFATLQEALAHALTEK 17 1 0 Unmodified _VEFATLQEALAHALTEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.67 3 624.335153 1869.98363 76240.18 0.79242 0.00049474 -0.31083 -0.00019406 0.48159 0.00030068 624.335127658064 627.006488609336 122.98 0.76422 122.98 122.69 123.46 0 338 58 8 0 0 0 0.0019242 2 79561 26.075 26.075 1 0.81879 0.86892 0 31498000 17668000 13830000 36659 186;1747 13853 14231 57445;57446 57446 VEFATLQEALAHALTEK 17 1 0 Unmodified _VEFATLQEALAHALTEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 940.5087 2 935.999091 1869.98363 64124.93 0.6555 0.00061355 -0.14478 -0.00013551 0.51072 0.00047804 936.500076611772 940.005863230068 122.98 0.4465 122.98 122.73 123.18 -7.6294E-06 122 33 5 0 0 0 2.0461E-05 3 79674 83.617 83.617 1 0.78658 0.78471 0 7864400 4532700 3331700 36660 186;1747 13853 14231 57447;57448;57449 57448 VEFATLQEALAHALTEK 17 1 0 Unmodified _VEFATLQEALAHALTEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3427 3 624.335153 1869.98363 76107.52 0.70524 0.00044031 -0.27154 -0.00016953 0.4337 0.00027077 624.668912908732 627.340862296243 122.39 0.76791 122.39 122.02 122.79 -7.6294E-06 292 60 9 0 0 0 0.0014336 2 80978 33.697 33.697 1 0.82372 0.92832 0 60300000 32416000 27883000 36661 186;1747 13853 14231 57450;57451 57450 VEFATLQEALAHALTEK 17 1 0 Unmodified _VEFATLQEALAHALTEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 935.9995 2 935.999091 1869.98363 63087.68 0.71563 0.00066983 -1.3282 -0.0012432 -0.61256 -0.00057336 936.499051147821 940.00504173156 122.41 0.42722 122.41 122.14 122.57 0 77 32 4 0 0 0 0.00069535 2 81128 46.069 46.069 1 0.69831 0.70087 0 13739000 7239800 6498800 36662 186;1747 13853 14231 57452;57453 57453 VEFATLQEALAHALTEK 17 1 0 Unmodified _VEFATLQEALAHALTEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 624.6697 3 624.335153 1869.98363 76622.64 0.96868 0.00060478 -0.23318 -0.00014558 0.7355 0.0004592 624.335009676316 627.340776381986 134.47 0.28983 134.47 134.37 134.66 0 68 10 12 0 0 0 5.3529E-08 2 82107 90.714 90.714 1 1.5227 1.2754 0 51414000 21568000 29847000 36663 186;1747 13853 14231 57454;57455 57454 VEFATLQEALAHALTEK 17 1 0 Unmodified _VEFATLQEALAHALTEK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 627.0064 3 624.335153 1869.98363 76584.84 0.70216 0.00043838 -0.35875 -0.00022398 0.34341 0.0002144 624.669235972479 627.006339306166 134.4 0.24078 134.4 134.32 134.56 0 54 8 11 0 0 0 1.3262E-25 2 81137 118.53 118.53 1 1.285 1.0805 0 50901000 24745000 26156000 36664 186;1747 13853 14231 57456;57457 57456 VEFMDDTSR 9 0 1 Oxidation (M) _VEFM(ox)DDTSR_ VEFM(1)DDTSR VEFM(74.92)DDTSR 0 1 0 B2R4R9;P62857 B2R4R9 B2R4R9 RPS28 40S ribosomal protein S28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.2379 2 558.237321 1114.46009 81118.2 0.57622 0.00032167 1.0176 0.00056808 1.5939 0.00088975 558.237117714392 563.242604021642 27.426 0.56037 27.426 27.185 27.746 0 141 34 7 0 0 0 0.001087 1 12683 74.92 74.92 1 1.4319 1.5698 0 53355000 21324000 32030000 36665 829 13854 14232 57458 57458 657 VEFMDDTSR 9 0 1 Oxidation (M) _VEFM(ox)DDTSR_ VEFM(1)DDTSR VEFM(76.22)DDTSR 0 1 0 B2R4R9;P62857 B2R4R9 B2R4R9 RPS28 40S ribosomal protein S28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.2415 2 558.237321 1114.46009 80749.48 0.68288 0.00038121 -0.12202 -6.8117E-05 0.56086 0.00031309 558.237188348468 563.241292430025 27.957 0.63391 27.957 27.579 28.213 0 198 44 6 0 0 0 0.0010386 1 13110 76.221 75.22 1 1.4803 1.643 0 69304000 26013000 43291000 36666 829 13854 14232 57459 57459 657 VEFMDDTSR 9 0 1 Oxidation (M) _VEFM(ox)DDTSR_ VEFM(1)DDTSR VEFM(80.45)DDTSR 0 1 0 B2R4R9;P62857 B2R4R9 B2R4R9 RPS28 40S ribosomal protein S28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.2417 2 558.237321 1114.46009 81422.09 0.29955 0.00016722 -0.060998 -3.4051E-05 0.23855 0.00013317 558.237275083808 563.241309400765 27.469 0.46752 27.469 27.239 27.706 -1.9073E-06 110 24 7 0 0 0 0.00088103 1 12780 80.455 78.27 1 1.4142 1.6193 0 85109000 30158000 54952000 36667 829 13854 14232 57460 57460 657 VEFMDDTSR 9 0 1 Oxidation (M) _VEFM(ox)DDTSR_ VEFM(1)DDTSR VEFM(74.92)DDTSR 0 1 0 B2R4R9;P62857 B2R4R9 B2R4R9 RPS28 40S ribosomal protein S28 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.238 2 558.237321 1114.46009 NaN NaN NaN 0.41688 0.00023272 NaN NaN NaN NaN 26.983 0.43015 26.983 26.822 27.252 1.9073E-06 0 0 0 0.0016073 1 12341 74.92 66.651 1 NaN NaN 0 33469000 33469000 0 36668 829 13854 14232 57461 57461 657 VEFMDDTSR 9 0 1 Unmodified _VEFMDDTSR_ 0 0 0 B2R4R9;P62857 B2R4R9 B2R4R9 RPS28 40S ribosomal protein S28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.2406 2 550.239864 1098.46517 83409.84 0.39667 0.00021826 0.23393 0.00012872 0.6306 0.00034698 550.240085416497 555.243972044008 53.552 0.53017 53.552 53.374 53.904 0 126 38 4 0 0 0 0.019235 1 26081 51.346 48.339 1 1.5053 1.3125 0 1473300 655110 818200 36669 829 13854 14233 57462 57462 VEFSISDK 8 1 0 Unmodified _VEFSISDK_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0;Q9UG93 Q9GZV0 Q9GZV0 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7436 2 462.737283 923.460012 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.749 1 55.749 55.249 56.249 0 0 0 0 0.023811 1 31363 65.88 37.671 1 36670 42 13855 14234 57463 57463 VEFTFPDFVTEGAR 14 0 1 Unmodified _VEFTFPDFVTEGAR_ 0 0 0 O14965;B4DX16;B2R6Z3 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.8939 2 807.893563 1613.77257 67832.85 0.89325 0.00072165 -0.081826 -6.6107E-05 0.81142 0.00065554 807.89349564986 812.897724976476 120.15 0.5847 120.15 119.9 120.49 0 244 40 8 0 0 0 1.4624E-06 2 77324 108.37 108.37 1 1.1711 1.1974 0 31521000 15143000 16378000 36671 1369 13856 14235 57464;57465 57464 VEFTFPDFVTEGAR 14 0 1 Unmodified _VEFTFPDFVTEGAR_ 0 0 0 O14965;B4DX16;B2R6Z3 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.4 2 807.893563 1613.77257 67397.2 0.73739 0.00059573 -0.11085 -8.9557E-05 0.62653 0.00050617 808.394439048596 812.897739372387 119.64 0.54521 119.64 119.37 119.92 0 254 39 8 0 0 0 0.00011297 2 78806 83.045 80.245 1 1.0806 1.1953 0 42102000 18509000 23593000 36672 1369 13856 14235 57466;57467 57466 VEFTFPDFVTEGAR 14 0 1 Unmodified _VEFTFPDFVTEGAR_ 0 0 0 O14965;B4DX16;B2R6Z3 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.8947 2 807.893563 1613.77257 67929.52 1.0075 0.00081397 -0.32699 -0.00026417 0.68053 0.0005498 807.893569454766 812.897671651614 132.29 0.57626 132.29 132.04 132.61 0 191 26 10 0 0 0 0.00081041 2 80328 58.172 58.172 1 1.3136 1.1115 0 9436000 4336000 5100000 36673 1369 13856 14235 57468;57469 57468 VEFTFPDFVTEGAR 14 0 1 Unmodified _VEFTFPDFVTEGAR_ 0 0 0 O14965;B4DX16;B2R6Z3 O14965 O14965 AURKA Aurora kinase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 808.3956 2 807.893563 1613.77257 68461.55 1.1098 0.00089659 -0.12677 -0.00010242 0.98302 0.00079417 807.893759430082 812.897947402432 132.04 0.50853 132.04 131.79 132.3 0 185 22 11 0 0 0 0.00019921 2 79268 69.451 69.451 1 1.2576 1.0379 0 14461000 6635100 7826100 36674 1369 13856 14235 57470;57471 57471 VEGTDVTGIEEVVIPK 16 1 0 Unmodified _VEGTDVTGIEEVVIPK_ 0 0 0 Q96EY7;B8ZZQ4;B4DF73;F8WE76 Q96EY7 Q96EY7 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.9617 2 842.953817 1683.89308 67745.28 0.85126 0.00071758 0.091633 7.7243E-05 0.9429 0.00079482 843.455072602083 846.961109315029 107.74 0.39731 107.74 107.53 107.93 0 114 27 6 0 0 0 0.0011743 1 67237 61.435 52.735 1 1.8569 1.9232 0 11202000 3910600 7291800 36675 1963 13857 14236 57472 57472 VEGTDVTGIEEVVIPK 16 1 0 Unmodified _VEGTDVTGIEEVVIPK_ 0 0 0 Q96EY7;B8ZZQ4;B4DF73;F8WE76 Q96EY7 Q96EY7 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.9611 2 842.953817 1683.89308 68031.54 0.96394 0.00081256 0.23411 0.00019734 1.198 0.0010099 843.455070594283 846.961277568794 107.26 0.41311 107.26 107.05 107.46 0 89 26 6 0 0 0 0.00038663 1 68403 68.676 59.568 1 1.8966 1.9382 0 11956000 4556900 7399300 36676 1963 13857 14236 57473 57473 VEGTEPTTAFNLFVGNLNFNK 21 1 0 Unmodified _VEGTEPTTAFNLFVGNLNFNK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1160.5919 2 1156.58151 2311.14846 NaN NaN NaN 2.0315 0.0023496 NaN NaN NaN NaN 128.96 0.17831 128.96 128.84 129.02 0 0 0 0 0.020989 1 84063 30.874 10.017 1 NaN NaN 0 19106000 0 19106000 36677 151 13858 14237 57474 57474 VEGTEPTTAFNLFVGNLNFNK 21 1 0 Unmodified _VEGTEPTTAFNLFVGNLNFNK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1157.0822 2 1156.58151 2311.14846 56297.66 0.065598 7.5869E-05 0.55762 0.00064493 0.62321 0.0007208 1157.08212072357 1161.09136826193 129.06 1.0294 129.06 128.5 129.53 0 694 81 13 0 0 0 4.4112E-47 6 86407 159.64 152.44 1 1.1216 1.264 0 124330000 54605000 69722000 36678 151 13858 14237 57475;57476;57477;57478;57479;57480 57480 VEHINLHPELDGQEYVVEFDFLGK 24 1 0 Unmodified _VEHINLHPELDGQEYVVEFDFLGK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 709.8585 4 707.603892 2826.38646 71291.4 0.86826 0.00061438 0.025731 1.8208E-05 0.89399 0.00063259 707.854746014857 709.858220458611 129.17 0.84871 129.17 128.87 129.72 -1.5259E-05 320 39 13 0 0 0 0.00080004 1 78040 35.32 35.32 1 1.5583 1.2937 0 45889000 18439000 27450000 36679 1470 13859 14238 57481 57481 VEHINLHPELDGQEYVVEFDFLGK 24 1 0 Unmodified _VEHINLHPELDGQEYVVEFDFLGK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 946.1423 3 943.136097 2826.38646 62119.22 0.73665 0.00069476 -0.17084 -0.00016113 0.56581 0.00053363 943.470043891085 946.141545076822 129.18 0.59584 129.18 128.93 129.52 0 223 27 12 0 0 0 8.2101E-21 2 78041 101.47 101.47 1 1.2183 0.97006 0 19612000 8132300 11480000 36680 1470 13859 14238 57482;57483 57482 VEHINLHPELDGQEYVVEFDFLGK 24 1 0 Unmodified _VEHINLHPELDGQEYVVEFDFLGK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 943.4701 3 943.136097 2826.38646 61787.9 0.90634 0.0008548 0.11457 0.00010806 1.0209 0.00096286 943.470191443739 946.141786604923 128.97 0.52718 128.97 128.63 129.16 0 98 20 12 0 0 0 1.6917E-56 2 77047 160.88 160.88 1 1.4368 1.1558 0 22625000 9236000 13389000 36681 1470 13859 14238 57484;57485 57485 VEHNQSYSQAGITETEWTSGSSK 23 1 0 Unmodified _VEHNQSYSQAGITETEWTSGSSK_ 0 0 0 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 845.3899 3 842.71749 2525.13064 68142.77 0.57528 0.00048479 -0.084901 -7.1548E-05 0.49037 0.00041325 843.051573650834 845.389074819656 64.805 0.50748 64.805 64.507 65.014 0 109 35 5 0 0 0 0.052159 1 33387 9.5366 9.0059 1 1.3605 1.0606 0 3307200 1544200 1763000 36682 334 13860 14239 57486 57486 VEHNQSYSQAGITETEWTSGSSK 23 1 0 Unmodified _VEHNQSYSQAGITETEWTSGSSK_ 0 0 0 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.3907 3 842.71749 2525.13064 68210.2 0.37295 0.0003143 0.1619 0.00013643 0.53485 0.00045073 843.386047624379 845.723932798782 65.341 0.34512 65.341 65.135 65.48 7.6294E-06 102 22 7 0 0 0 0.053469 1 32949 9.2924 9.2924 1 0.95536 0.76845 0 3017800 1553100 1464700 36683 334 13860 14239 57487 57487 VEIAGPGFINVHLR 14 0 1 Unmodified _VEIAGPGFINVHLR_ 0 0 0 P54136 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.6263 3 507.956059 1520.84635 NaN NaN NaN -0.42259 -0.00021466 NaN NaN NaN NaN 99.836 0.79994 99.836 99.412 100.21 -7.6294E-06 0 0 0 0.00025293 1 61088 76.073 64.096 1 NaN NaN 0 13136000 0 13136000 36684 1609 13861 14240 57488 57488 VEIAGPGFINVHLR 14 0 1 Unmodified _VEIAGPGFINVHLR_ 0 0 0 P54136 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.2924 3 507.956059 1520.84635 NaN NaN NaN -0.21464 -0.00010903 NaN NaN NaN NaN 98.661 0.60516 98.661 98.331 98.936 -7.6294E-06 0 0 0 1.0677E-05 1 61723 91.858 77.6 1 NaN NaN 0 15545000 0 15545000 36685 1609 13861 14240 57489 57489 VEIAGPGFINVHLR 14 0 1 Unmodified _VEIAGPGFINVHLR_ 0 0 0 P54136 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.9558 3 507.956059 1520.84635 84088.53 0.67417 0.00034245 -0.70462 -0.00035791 -0.030445 -1.5465E-05 508.290171724893 511.291268451076 111.5 0.40407 111.5 111.3 111.7 0 101 19 7 0 0 0 0.0020607 1 64598 41.644 41.644 1 0.87944 0.73665 0 4003700 2224700 1779100 36686 1609 13861 14240 57490 57490 VEIAGPGFINVHLR 14 0 1 Unmodified _VEIAGPGFINVHLR_ 0 0 0 P54136 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.9562 3 507.956059 1520.84635 83545.46 0.46635 0.00023689 -0.5187 -0.00026348 -0.052346 -2.6589E-05 507.955731439682 511.291509637723 111.25 0.42735 111.25 111.04 111.47 0 85 19 6 0 0 0 5.6777E-05 1 63474 71.548 71.548 1 0.82271 0.68083 0 7986500 3992400 3994100 36687 1609 13861 14240 57491 57491 VEIDQQQLTQQQLNGN 16 0 0 Unmodified _VEIDQQQLTQQQLNGN_ 0 0 0 A0A0D9SGE8;Q8IWS0;B4E138 A0A0D9SGE8 A0A0D9SGE8 PHF6 PHD finger protein 6 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 928.9625 2 928.460861 1854.90717 NaN NaN NaN -0.15094 -0.00014014 NaN NaN NaN NaN 77.248 0.45533 77.248 77.093 77.548 -7.6294E-06 0 0 0 0.0076455 1 45572 63.624 54.924 1 36688 528 13862 14241 57492 57492 VEIETSEEIQEK 12 1 0 Unmodified _VEIETSEEIQEK_ 0 0 0 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.8633 2 717.353936 1432.69332 70958.8 0.74797 0.00053656 0.25479 0.00018278 1.0028 0.00071934 717.35451151286 721.360925369155 57.231 0.36932 57.231 57.032 57.401 0 56 21 4 0 0 0 0.046405 1 28332 33.229 26.101 1 1.7092 1.4721 0 1386900 731470 655380 36689 1738 13863 14242 57493 57493 VEILANDQGNR 11 0 1 Unmodified _VEILANDQGNR_ 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;P48741 Q53FC7 Q53FC7 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.8216 2 614.817658 1227.62076 76676.63 0.80269 0.00049351 0.0016315 1.003E-06 0.80432 0.00049451 614.817582196666 619.821615672828 36.066 1.3491 36.066 35.284 36.633 3.8147E-06 584 123 8 0 0 0 9.263E-23 3 17985 164.68 0 1 1.0041 1.1878 0 304600000 146810000 157790000 36690 845 13864 14243 57494;57495;57496 57494 VEILANDQGNR 11 0 1 Unmodified _VEILANDQGNR_ 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;P48741 Q53FC7 Q53FC7 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8171 2 614.817658 1227.62076 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.584 1 35.584 35.084 36.084 0 0 0 0 0.0056516 1 17921 64.297 0 1 36691 845 13864 14243 57497 57497 VEILANDQGNR 11 0 1 Unmodified _VEILANDQGNR_ 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;P48741 Q53FC7 Q53FC7 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.8218 2 614.817658 1227.62076 77111.86 0.76001 0.00046727 0.17765 0.00010922 0.93765 0.00057649 614.817734805186 619.821846480687 35.135 1.0717 35.135 34.69 35.762 0 518 95 10 0 0 0 4.5423E-08 2 17728 118.18 0 1 1.0146 1.1867 0 622710000 303980000 318730000 36692 845 13864 14243 57498;57499 57499 VEILANDQGNR 11 0 1 Unmodified _VEILANDQGNR_ 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;P48741 Q53FC7 Q53FC7 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.8177 2 614.817658 1227.62076 NaN NaN NaN -0.43606 -0.0002681 NaN NaN NaN NaN 35.626 0.27076 35.626 35.569 35.84 0 0 0 0 0.0026408 1 18233 72.643 0 1 NaN NaN 0 7461700 7461700 0 36693 845 13864 14243 57500 57500 VEILANDQGNR 11 0 1 Unmodified _VEILANDQGNR_ 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;P48741 Q53FC7 Q53FC7 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 614.8179 2 614.817658 1227.62076 77787.47 0.26268 0.0001615 0.29691 0.00018254 0.55959 0.00034404 614.817862052881 619.821915880378 40.705 1.4849 40.705 40.317 41.802 0 495 117 10 0 0 0 7.4243E-05 4 18701 98.249 0 1 1.1362 0.97957 0 71123000 34668000 36455000 36694 845 13864 14243 57501;57502;57503;57504 57502 VEILANDQGNR 11 0 1 Unmodified _VEILANDQGNR_ 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;P48741 Q53FC7 Q53FC7 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 619.8228 2 614.817658 1227.62076 76778.84 0.22109 0.00013593 0.044541 2.7384E-05 0.26563 0.00016332 614.817703212988 619.821788489329 40.827 1.3796 40.827 40.432 41.811 0 535 108 10 0 0 0 0.0064337 2 18144 54.416 0 1 1.1468 1.0006 0 56116000 26262000 29854000 36695 845 13864 14243 57505;57506 57505 VEILNEHR 8 0 1 Unmodified _VEILNEHR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.2791 2 505.274898 1008.53524 85171.77 0.37435 0.00018915 -0.29205 -0.00014756 0.082309 4.1589E-05 505.274777180791 510.278979044756 27.936 0.43663 27.936 27.669 28.106 0 132 29 8 0 0 0 0.00095514 2 13077 124.08 30.578 1 0.94866 1.0544 0 73864000 36954000 36910000 36696 2070 13865 14244 57507;57508 57508 VEILNEHR 8 0 1 Unmodified _VEILNEHR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 337.1858 3 337.185691 1008.53524 103074.3 -0.090932 -3.0661E-05 0.23993 8.09E-05 0.149 5.0239E-05 337.18570739543 340.521814496678 27.942 0.39473 27.942 27.762 28.157 1.9073E-06 133 26 8 0 0 0 0.0068556 1 13055 51.346 0 1 1.0126 1.1462 0 104920000 48883000 56038000 36697 2070 13865 14244 57509 57509 VEILNEHR 8 0 1 Unmodified _VEILNEHR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 337.1859 3 337.185691 1008.53524 102690.2 -0.14131 -4.7649E-05 0.10332 3.4836E-05 -0.037998 -1.2812E-05 337.185685521142 340.521753066265 27.307 0.41198 27.307 27.112 27.524 -1.9073E-06 99 21 7 0 0 0 0.0032253 2 12557 64.265 0 1 0.85758 0.98425 0 80038000 41136000 38902000 36698 2070 13865 14244 57510;57511 57510 VEILNEHR 8 0 1 Unmodified _VEILNEHR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.2746 2 505.274898 1008.53524 84963.93 0.12454 6.2925E-05 -0.37012 -0.00018701 -0.24558 -0.00012408 505.274734322037 510.279062713562 27.3 0.35038 27.3 27.132 27.483 0 102 18 8 0 0 0 0.0010104 2 12592 116.73 20.234 1 0.88505 1.0171 0 77363000 40487000 36876000 36699 2070 13865 14244 57512;57513 57512 VEILNEHR 8 0 1 Unmodified _VEILNEHR_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.2738 2 505.274898 1008.53524 84945.51 0.2387 0.00012061 -0.048263 -2.4386E-05 0.19044 9.6223E-05 505.274453167452 510.279250399254 31.3 0.5525 31.3 31.037 31.59 0 127 35 6 0 0 0 0.060276 1 13166 40.002 8.0671 1 1.9514 1.633 0 3906700 1429900 2476800 36700 2070 13865 14244 57514 57514 VEITPESILSALSK 14 1 0 Unmodified _VEITPESILSALSK_ 0 0 0 Q5VT52 Q5VT52 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.9287 2 743.921789 1485.82903 NaN NaN NaN -0.56812 -0.00042264 NaN NaN NaN NaN 131.47 0.21339 131.47 131.3 131.51 0 0 0 0 0.0067802 1 85723 54.259 28.321 1 NaN NaN 0 1038600 0 1038600 36701 1830 13866 14245 57515 57515 VELCSFSGYK 10 1 0 Unmodified _VELCSFSGYK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.2885 2 595.281531 1188.54851 76405.03 0.61769 0.0003677 -0.2891 -0.0001721 0.32859 0.0001956 595.281869955677 599.288393195905 69.003 2.0051 69.003 68.476 70.481 -7.6294E-06 943 175 13 0 0 0 9.6112E-06 3 39903 105.52 98.3 1 0.69658 0.84529 0 2165000000 1316500000 848460000 36702 1140 13867 14246 57516;57517;57518 57516 VELCSFSGYK 10 1 0 Unmodified _VELCSFSGYK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.2889 2 595.281531 1188.54851 75991.98 0.59739 0.00035561 -0.45221 -0.00026919 0.14517 8.6419E-05 595.281777044929 599.288323471293 67.782 1.0671 67.782 67.523 68.59 0 623 88 10 0 0 0 1.6945E-09 2 40120 130.75 121.53 1 0.68446 0.80979 0 1941000000 1192500000 748460000 36703 1140 13867 14246 57519;57520 57520 VELCSFSGYK 10 1 0 Unmodified _VELCSFSGYK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.2881 2 595.281531 1188.54851 79061.06 0.53339 0.00031752 -0.91668 -0.00054568 -0.3833 -0.00022817 595.281025143984 599.287803533451 68.706 0.46997 68.706 68.432 68.902 0 136 41 5 0 0 0 0.0088882 2 40875 55.461 47.043 1 0.98327 1.0565 0 21482000 10176000 11306000 36704 1140 13867 14246 57521;57522 57522 VELCSFSGYK 10 1 0 Unmodified _VELCSFSGYK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.2889 2 595.281531 1188.54851 75349.39 0.50273 0.00029926 -0.34423 -0.00020491 0.1585 9.435E-05 595.282071654195 599.288567401062 79.17 1.3119 79.17 78.818 80.13 0 642 78 12 0 0 0 1.1374E-05 3 42542 104.2 98.416 1 1.2831 1.1387 0 348620000 156650000 191980000 36705 1140 13867 14246 57523;57524;57525 57524 VELCSFSGYK 10 1 0 Unmodified _VELCSFSGYK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 599.2893 2 595.281531 1188.54851 75190.03 0.49666 0.00029565 -0.25431 -0.00015139 0.24235 0.00014427 595.282059020375 599.288596751056 79.424 2.0179 79.424 79.105 81.122 0 651 129 11 0 0 0 0.0016591 3 41816 72.643 72.643 1 1.2011 1.0448 0 334080000 144530000 189560000 36706 1140 13867 14246 57526;57527;57528 57526 VELDNMPLR 9 0 1 Oxidation (M) _VELDNM(ox)PLR_ VELDNM(1)PLR VELDNM(132.08)PLR 0 1 0 A8K525;A0A0S2Z4Z9;Q15233;C9IZL7;C9JYS8;A0A0S2Z4E7;C9J4X2 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.7855 2 551.781699 1101.54884 79186.93 0.62405 0.00034434 -0.018414 -1.0161E-05 0.60564 0.00033418 551.782422417085 556.785695991523 49.147 0.84969 49.147 48.716 49.565 0 313 62 8 0 0 0 2.6683E-06 2 26900 132.08 90.192 1 1.691 1.9377 0 133090000 47377000 85718000 36707 573 13868 14247 57529;57530 57530 429 VELDNMPLR 9 0 1 Oxidation (M) _VELDNM(ox)PLR_ VELDNM(1)PLR VELDNM(53.97)PLR 0 1 0 A8K525;A0A0S2Z4Z9;Q15233;C9IZL7;C9JYS8;A0A0S2Z4E7;C9J4X2 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.7819 2 551.781699 1101.54884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.173 1 56.173 55.673 56.673 0 0 0 0 0.012403 1 28275 53.968 31.228 1 36708 573 13868 14247 57531 57531 429 VELDNMPLR 9 0 1 Oxidation (M) _VELDNM(ox)PLR_ VELDNM(1)PLR VELDNM(50.61)PLR 0 1 0 A8K525;A0A0S2Z4Z9;Q15233;C9IZL7;C9JYS8;A0A0S2Z4E7;C9J4X2 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.7862 2 551.781699 1101.54884 81930.06 0.62314 0.00034384 -0.51459 -0.00028394 0.10855 5.9898E-05 551.781599607807 556.785775264599 56.836 0.81496 56.836 56.414 57.229 -3.8147E-06 213 56 6 0 0 0 0.009716 2 27916 50.607 42.599 1 0.50413 0.4361 0 2702900 1680000 1022900 36709 573 13868 14247 57532;57533 57533 429 VELDNMPLR 9 0 1 Unmodified _VELDNMPLR_ 0 0 0 A8K525;A0A0S2Z4Z9;Q15233;C9IZL7;C9JYS8;A0A0S2Z4E7;C9J4X2 A8K525 A8K525 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.2897 2 543.784241 1085.55393 84394.49 0.54823 0.00029812 0.049227 2.6769E-05 0.59745 0.00032489 543.784255979578 548.788670851155 86.048 0.5326 86.048 85.777 86.309 0 82 27 4 0 0 0 0.020055 3 46290 50.607 50.607 1 1.4712 1.2731 0 1762400 701560 1060800 36710 573 13868 14248 57534;57535;57536 57534 VELECETIK 9 1 0 Unmodified _VELECETIK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.7888 2 560.781364 1119.54818 NaN NaN NaN -0.18349 -0.0001029 NaN NaN NaN NaN 47.526 0.39991 47.526 47.34 47.74 0 0 0 0 0.023125 1 26440 56.434 25.36 1 NaN NaN 0 13605000 0 13605000 36711 696 13869 14249 57537 57537 VELECETIK 9 1 0 Unmodified _VELECETIK_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.7812 2 560.781364 1119.54818 79498.36 0.64628 0.00036242 -0.16672 -9.3491E-05 0.47957 0.00026893 560.780897542571 564.788298218271 56.721 0.92122 56.721 56.445 57.367 0 162 39 6 0 0 0 0.03089 2 27977 45.68 39.577 1 1.3096 1.0575 0 2552100 949620 1602500 36712 696 13869 14249 57538;57539 57538 VELEVPQLCNFILK 14 1 0 Unmodified _VELEVPQLCNFILK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 851.4665 2 851.465841 1700.91713 NaN NaN NaN -0.091563 -7.7963E-05 NaN NaN NaN NaN 128.31 0.20171 128.31 128.2 128.4 0 0 0 0 0.00023379 1 85746 83.862 65.594 1 NaN NaN 0 9994100 9994100 0 + 36713 1146 13870 14250 57540 57540 VELHSTCQTISVDR 14 0 1 Unmodified _VELHSTCQTISVDR_ 0 0 0 B4E0Q4;B4DZJ7;O00267;B4DJK4 B4E0Q4 B4E0Q4 SUPT5H Transcription elongation factor SPT5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.2848 3 548.938516 1643.79372 87616.15 0.64249 0.00035269 0.6698 0.00036768 1.3123 0.00072037 549.274656309181 552.27373898941 42.459 0.29592 42.459 42.345 42.641 0 52 23 4 0 0 0 0.005688 2 22988 27.969 21.088 1 0.88803 0.91612 0 4799400 2435600 2363800 36714 1056 13871 14251 57541;57542 57542 VELIAYFEK 9 1 0 Unmodified _VELIAYFEK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;B5MCB4;A0A075BPP5;A0A0S2Z401;A0A0D9SFX7;D5L9I4;A0A0S2Z3U3;A0A1B0GTV0 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 560.3146 2 556.305332 1110.59611 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.4 1 103.4 102.9 103.9 0 0 0 0 0.0096069 1 65400 64.04 40.612 1 36715 623 13872 14252 57543 57543 VELIAYFEK 9 1 0 Unmodified _VELIAYFEK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;B5MCB4;A0A075BPP5;A0A0S2Z401;A0A0D9SFX7;D5L9I4;A0A0S2Z3U3;A0A1B0GTV0 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.3055 2 556.305332 1110.59611 81244.3 0.66717 0.00037115 0.8566 0.00047653 1.5238 0.00084768 556.306125321188 560.31240280347 116.09 0.7701 116.09 115.66 116.43 0 92 32 5 0 0 0 0.017039 2 68091 53.327 28.404 1 0.50874 0.40029 0 3113400 1874300 1239200 36716 623 13872 14252 57544;57545 57544 VELINMFK 8 1 0 Oxidation (M) _VELINM(ox)FK_ VELINM(1)FK VELINM(40.1)FK 0 1 0 REV__Q498Y9 REV__Q498Y9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.2747 2 505.272978 1008.5314 84424.33 0.28526 0.00014413 1.9742 0.00099749 2.2594 0.0011416 505.274611723531 509.281324634671 31.303 0.61312 31.303 31.058 31.671 -1.9073E-06 110 31 6 0 0 0 0.029068 1 12628 40.103 17.084 1 1.0845 0.87029 0 2469400 1292900 1176500 + 36717 2158 13873 14253 57546 57546 2003 VELQELNDR 9 0 1 Unmodified _VELQELNDR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;B4DUI0 V9HWE1 V9HWE1 HEL113;VIM;tmp_locus_29;DES Vimentin;Desmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.288 2 558.288202 1114.56185 79622.19 0.78457 0.00043802 0.0051494 2.8748E-06 0.78972 0.00044089 558.288148604356 563.29214502129 49.292 0.97555 49.292 48.969 49.944 0 310 68 10 0 0 0 2.0953E-06 2 26976 135.79 66.876 1 1.3345 1.5833 0 684630000 288820000 395800000 36718 1457 13874 14254 57547;57548 57548 VELQELNDR 9 0 1 Unmodified _VELQELNDR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;B4DUI0 V9HWE1 V9HWE1 HEL113;VIM;tmp_locus_29;DES Vimentin;Desmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.2886 2 558.288202 1114.56185 79539.66 0.58225 0.00032506 -0.10473 -5.8471E-05 0.47751 0.00026659 558.288124774116 563.292158341211 48.072 0.72248 48.072 47.806 48.529 0 291 49 10 0 0 0 1.8581E-08 2 26782 148.52 68.926 1 1.3037 1.5223 0 544960000 242940000 302020000 36719 1457 13874 14254 57549;57550 57550 VELQELNDR 9 0 1 Unmodified _VELQELNDR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;B4DUI0 V9HWE1 V9HWE1 HEL113;VIM;tmp_locus_29;DES Vimentin;Desmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.2875 2 558.288202 1114.56185 80444.44 0.61352 0.00034252 -0.03836 -2.1416E-05 0.57516 0.0003211 558.28807987499 563.292229066517 56.776 0.93473 56.776 56.462 57.397 0 279 65 7 0 0 0 0.00060281 2 28604 96.948 42.398 1 3.8332 3.2779 0 39270000 8726800 30543000 36720 1457 13874 14254 57551;57552 57552 VELQELNDR 9 0 1 Unmodified _VELQELNDR_ 0 0 0 V9HWE1;P08670;B0YJC4;Q53HU8;B3KRK8;A0A1B0GUA0;A0A1B0GTT5;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;B4DUI0 V9HWE1 V9HWE1 HEL113;VIM;tmp_locus_29;DES Vimentin;Desmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.2927 2 558.288202 1114.56185 81114.36 0.65035 0.00036308 -0.19112 -0.0001067 0.45923 0.00025638 558.287974800733 563.292174596524 57.255 1.4076 57.255 56.954 58.362 0 285 97 7 0 0 0 0.00056832 2 28197 97.431 51.063 1 3.8246 3.3362 0 31616000 6296300 25320000 36721 1457 13874 14254 57553;57554 57553 VELQQGLR 8 0 1 Unmodified _VELQQGLR_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.7719 2 471.771991 941.529429 88345.26 0.25755 0.0001215 0.60309 0.00028452 0.86064 0.00040603 471.771951906255 476.776470937827 39.483 0.43456 39.483 39.271 39.706 3.8147E-06 127 36 4 0 0 0 0.0082133 1 20550 79.597 52.46 1 1.8032 1.8068 0 16256000 5981900 10274000 36722 305 13875 14255 57555 57555 VELQQGLR 8 0 1 Unmodified _VELQQGLR_ 0 0 0 Q6PKB3;G5EA06;B4DT94;A0A024RAJ1;Q92552;B4DKI9;D6RH20 Q6PKB3 Q6PKB3 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.7722 2 471.771991 941.529429 89031.88 0.27875 0.00013151 0.65226 0.00030772 0.93101 0.00043922 471.772028570736 476.776473151993 38.468 0.36349 38.468 38.279 38.643 0 109 30 6 0 0 0 0.024215 1 20145 56.011 28.486 1 1.7753 1.9128 0 25918000 8745800 17172000 36723 305 13875 14255 57556 57556 VELSDVQNPAISITENVLHFK 21 1 0 Unmodified _VELSDVQNPAISITENVLHFK_ 0 0 0 Q9P035 Q9P035 Q9P035 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.0845 3 785.084785 2352.23253 69291.79 0.94138 0.00073906 -0.23295 -0.00018289 0.70843 0.00055618 785.418756991983 788.090288386224 126.41 0.74564 126.41 126.01 126.76 -7.6294E-06 339 56 8 0 0 0 6.7084E-12 2 82163 96.718 96.718 1 1.0383 1.0835 0 15010000 7271900 7737700 36724 2091 13876 14256 57557;57558 57557 VELSDVQNPAISITENVLHFK 21 1 0 Unmodified _VELSDVQNPAISITENVLHFK_ 0 0 0 Q9P035 Q9P035 Q9P035 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.0853 3 785.084785 2352.23253 69446.88 0.97128 0.00076254 -0.19503 -0.00015312 0.77625 0.00060942 785.41860251071 788.090297069987 125.8 0.77045 125.8 125.43 126.2 -7.6294E-06 262 49 9 0 0 0 7.5816E-16 4 83788 102.98 102.98 1 0.90876 0.98563 0 22206000 11963000 10242000 36725 2091 13876 14256 57559;57560;57561;57562 57559 VELSDVQNPAISITENVLHFK 21 1 0 Unmodified _VELSDVQNPAISITENVLHFK_ 0 0 0 Q9P035 Q9P035 Q9P035 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 787.7572 3 785.084785 2352.23253 69025.97 0.76243 0.00059857 -0.648 -0.00050873 0.11443 8.9839E-05 785.418722458135 787.75565895754 134.57 0.32529 134.57 134.34 134.66 0 24 10 6 0 0 0 0.037521 2 81376 13.731 13.731 1 0.9479 0.76154 0 15925000 9226900 6698300 36726 2091 13876 14256 57563;57564 57564 VELSPMQK 8 1 0 Unmodified _VELSPMQK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;Q12873 F5GWX5;Q12873 F5GWX5 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.2569 2 466.249503 930.484453 90873.93 0.10676 4.9778E-05 0.4764 0.00022212 0.58316 0.0002719 466.249502644001 470.256804037922 46.236 0.51205 46.236 46.019 46.531 0 105 36 5 0 0 0 0.028561 1 22272 53.166 18.359 1 2.1629 1.7523 0 2740900 854930 1885900 36727 515;1701 13877 14257 57565 57565 VELSPMQK 8 1 0 Unmodified _VELSPMQK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;Q12873 F5GWX5;Q12873 F5GWX5 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 470.2566 2 466.249503 930.484453 87525.6 0.074547 3.4758E-05 0.61615 0.00028728 0.69069 0.00032203 466.249517283911 470.25707493201 46.271 0.55696 46.271 46.053 46.61 0 94 32 4 0 0 0 0.031359 1 21744 51.335 25.599 1 2.4525 1.9886 0 2788000 771760 2016200 36728 515;1701 13877 14257 57566 57566 VELSQLR 7 0 1 Unmodified _VELSQLR_ 0 0 0 P42766;F2Z388;A0A024R866;A4D2M5 P42766 P42766 RPL35;LOC154880 60S ribosomal protein L35 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.7483 2 422.747985 843.481417 89781.73 0.09523 4.0258E-05 0.10598 4.4802E-05 0.20121 8.5061E-05 422.748036103865 427.752042973548 46.903 1.4137 46.903 46.46 47.874 0 606 128 8 0 0 0 0.010057 3 25230 118.01 29.982 1 0.5666 0.67412 0 1479000000 945760000 533280000 36729 1567 13878 14258 57567;57568;57569 57567 VELSQLR 7 0 1 Unmodified _VELSQLR_ 0 0 0 P42766;F2Z388;A0A024R866;A4D2M5 P42766 P42766 RPL35;LOC154880 60S ribosomal protein L35 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.7478 2 422.747985 843.481417 NaN NaN NaN -1.237 -0.00052295 NaN NaN NaN NaN 48.178 0.32931 48.178 48.107 48.436 3.8147E-06 0 0 0 0.032103 1 26247 74.415 13.655 1 NaN NaN 0 8193300 8193300 0 36730 1567 13878 14258 57570 57570 VELSQLR 7 0 1 Unmodified _VELSQLR_ 0 0 0 P42766;F2Z388;A0A024R866;A4D2M5 P42766 P42766 RPL35;LOC154880 60S ribosomal protein L35 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.748 2 422.747985 843.481417 90265.09 -0.095425 -4.0341E-05 -0.10339 -4.3708E-05 -0.19881 -8.4048E-05 422.747889075494 427.752031984423 45.963 1.6394 45.963 45.553 47.193 3.8147E-06 664 138 9 0 0 0 0.010211 3 25132 122.79 30.884 1 0.55448 0.65645 0 1659500000 1063800000 595680000 36731 1567 13878 14258 57571;57572;57573 57571 VELSQLR 7 0 1 Unmodified _VELSQLR_ 0 0 0 P42766;F2Z388;A0A024R866;A4D2M5 P42766 P42766 RPL35;LOC154880 60S ribosomal protein L35 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 427.7519 2 422.747985 843.481417 89860.65 -0.19328 -8.1709E-05 -0.1343 -5.6777E-05 -0.32759 -0.00013849 422.748027418276 427.751937932824 53.996 3.2367 53.996 53.543 56.78 0 939 222 11 0 0 0 0.029075 2 26772 70.912 13.632 1 0.60037 0.52113 0 211410000 131110000 80296000 36732 1567 13878 14258 57574;57575 57574 VELSQLR 7 0 1 Unmodified _VELSQLR_ 0 0 0 P42766;F2Z388;A0A024R866;A4D2M5 P42766 P42766 RPL35;LOC154880 60S ribosomal protein L35 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 427.7519 2 422.747985 843.481417 89773.23 -0.50591 -0.00021387 0.031351 1.3254E-05 -0.47455 -0.00020062 422.748042096616 427.752069723451 54.324 3.152 54.324 53.854 57.006 -3.8147E-06 1007 219 10 0 0 0 0.029075 2 26361 70.912 13.632 1 0.59735 0.52165 0 162280000 100080000 62196000 36733 1567 13878 14258 57576;57577 57577 VELSTGMPR 9 0 1 Oxidation (M) _VELSTGM(ox)PR_ VELSTGM(1)PR VELSTGM(130.27)PR 0 1 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.2595 2 503.255317 1004.49608 84618.8 0.41645 0.00020958 0.10632 5.3505E-05 0.52277 0.00026308 503.255419173378 508.259482632393 28.995 0.49417 28.995 28.612 29.106 0 128 25 8 0 0 0 3.4769E-06 2 13729 130.27 67.557 1 1.447 1.6877 0 194040000 77413000 116630000 36734 1772;1918 13879 14259 57578;57579 57578 1644 VELSTGMPR 9 0 1 Oxidation (M) _VELSTGM(ox)PR_ VELSTGM(1)PR VELSTGM(116.25)PR 0 1 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.2557 2 503.255317 1004.49608 85071.38 0.32827 0.0001652 0.75508 0.00038 1.0833 0.0005452 503.255640300934 508.259920758929 28.158 0.58801 28.158 27.773 28.361 0 70 30 6 0 0 0 1.0803E-05 2 13366 116.25 80.37 1 1.4733 1.6937 0 200620000 75935000 124690000 36735 1772;1918 13879 14259 57580;57581 57581 1644 VELTITPDFQWDEK 14 1 0 Unmodified _VELTITPDFQWDEK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 860.9255 2 860.92506 1719.83557 66025.37 0.80092 0.00068953 -0.035927 -3.093E-05 0.76499 0.0006586 860.924955072934 865.433072211624 115.44 0.50311 115.44 115.23 115.73 7.6294E-06 250 34 10 0 0 0 2.9382E-05 1 73489 96.229 80.964 1 0.85651 0.92356 0 37564000 20419000 17145000 36736 1411 13880 14260 57582 57582 VELTITPDFQWDEK 14 1 0 Unmodified _VELTITPDFQWDEK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 860.9252 2 860.92506 1719.83557 65329 0.88025 0.00075783 0.04432 3.8156E-05 0.92457 0.00079599 860.924956044028 864.931788237772 114.94 0.61744 114.94 114.69 115.3 -7.6294E-06 229 39 10 0 0 0 2.0634E-09 2 74837 117.79 103.89 1 0.8227 0.91219 0 47595000 27945000 19649000 36737 1411 13880 14260 57583;57584 57584 VELTITPDFQWDEK 14 1 0 Unmodified _VELTITPDFQWDEK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 865.4332 2 860.92506 1719.83557 66242.02 0.65067 0.00056018 0.070212 6.0447E-05 0.72089 0.00062063 861.426830762806 864.932256098572 126.87 0.54607 126.87 126.57 127.11 7.6294E-06 108 22 6 0 0 0 0.0042177 2 76309 45.829 39.588 1 0.86464 0.6942 0 7718300 4541600 3176800 36738 1411 13880 14260 57585;57586 57585 VELTITPDFQWDEK 14 1 0 Unmodified _VELTITPDFQWDEK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 864.9321 2 860.92506 1719.83557 66122.6 0.49415 0.00042542 0.59851 0.00051527 1.0927 0.0009407 860.925340935955 864.933547538874 126.73 0.76781 126.73 126.44 127.21 0 123 33 7 0 0 0 0.0049382 2 75295 44.612 34.658 1 0.97503 0.79479 0 7636600 3973000 3663500 36739 1411 13880 14260 57587;57588 57587 VELVTGEEDEK 11 1 0 Unmodified _VELVTGEEDEK_ 0 0 0 P49792 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.8587 2 624.303715 1246.59288 80609.73 0.90968 0.00056791 0.12157 7.5898E-05 1.0312 0.00064381 624.303612434331 628.310916049718 39.611 0.27145 39.611 39.477 39.749 0 59 20 4 0 0 0 0.027828 1 20983 60.102 35.881 1 2.543 2.5449 0 15535000 4987600 10548000 36740 1588 13881 14261 57589 57589 VELVTGEEDEK 11 1 0 Unmodified _VELVTGEEDEK_ 0 0 0 P49792 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.3093 2 624.303715 1246.59288 85050.05 0.38036 0.00023746 -0.68167 -0.00042557 -0.30131 -0.00018811 624.303660462381 628.309843061815 46.4 0.29437 46.4 46.237 46.531 0 47 18 4 0 0 0 0.033049 1 22328 37.344 25.751 1 1.407 1.2564 0 777640 377970 399670 36741 1588 13881 14261 57590 57590 VEMDNLDNAQTSGIEEPSETK 21 1 0 Oxidation (M) _VEM(ox)DNLDNAQTSGIEEPSETK_ VEM(1)DNLDNAQTSGIEEPSETK VEM(43.81)DNLDNAQTSGIEEPSETK 0 1 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1163.0167 2 1162.01573 2322.01691 NaN NaN NaN 0.78089 0.00090741 NaN NaN NaN NaN 54.819 0.33612 54.819 54.703 55.039 0 0 0 0 0.00019656 1 30861 43.813 36.269 1 NaN NaN 0 4980800 4980800 0 36742 1991 13882 14262 57591 57591 1822 VEMDNLDNAQTSGIEEPSETK 21 1 0 Oxidation (M) _VEM(ox)DNLDNAQTSGIEEPSETK_ VEM(1)DNLDNAQTSGIEEPSETK VEM(52.53)DNLDNAQTSGIEEPSETK 0 1 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1166.0255 2 1162.01573 2322.01691 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.89 1 54.89 54.39 55.39 0 0 0 0 0.00086844 1 30871 52.527 47.726 1 36743 1991 13882 14262 57592 57592 1822 VEMDNLDNAQTSGIEEPSETK 21 1 0 Oxidation (M) _VEM(ox)DNLDNAQTSGIEEPSETK_ VEM(1)DNLDNAQTSGIEEPSETK VEM(158.65)DNLDNAQTSGIEEPSETK 0 1 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1166.0238 2 1162.01573 2322.01691 NaN NaN NaN 0.23759 0.00027609 NaN NaN NaN NaN 54.119 0.26966 54.119 53.962 54.232 0 0 0 0 1.8082E-61 1 30881 158.65 145.52 1 NaN NaN 0 4957800 0 4957800 36744 1991 13882 14262 57593 57593 1822 VEMDNLDNAQTSGIEEPSETK 21 1 0 Oxidation (M) _VEM(ox)DNLDNAQTSGIEEPSETK_ VEM(1)DNLDNAQTSGIEEPSETK VEM(67.12)DNLDNAQTSGIEEPSETK 0 1 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1162.0167 2 1162.01573 2322.01691 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.904 1 53.904 53.404 54.404 0 0 0 0 1.2366E-05 1 30806 67.115 54.95 1 36745 1991 13882 14262 57594 57594 1822 VENLFNEK 8 1 0 Unmodified _VENLFNEK_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 496.7567 2 496.756007 991.497461 85803.31 0.40312 0.00020025 -0.064512 -3.2047E-05 0.33861 0.00016821 496.756036739696 500.763068861288 48.546 0.76029 48.546 48.202 48.963 0 178 57 5 0 0 0 0.0018562 2 27152 105.14 34.614 1 1.0014 1.1035 0 43309000 21160000 22148000 36746 789 13883 14263 57595;57596 57595 VENMVDQLLR 10 0 1 Oxidation (M) _VENM(ox)VDQLLR_ VENM(1)VDQLLR VENM(63.22)VDQLLR 0 1 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.8053 2 616.818812 1231.62307 79374.41 0.39899 0.0002461 -0.36706 -0.00022641 0.031925 1.9692E-05 617.320098434412 621.822598734255 69.722 0.31885 69.722 69.58 69.899 0 70 26 4 0 0 0 0.043108 1 41498 63.216 42.887 1 2.2785 2.3036 0 9745700 3267300 6478500 36747 1561 13884 14264 57597 57597 1314 VENSIPAAGETQNVEVAAGPAGK 23 1 0 Unmodified _VENSIPAAGETQNVEVAAGPAGK_ 0 0 0 Q15020;B4DYA2;B4DRG9;F8VV04 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1109.568 2 1105.0584 2208.10224 NaN NaN NaN 0.31148 0.0003442 NaN NaN NaN NaN 71.047 0.21431 71.047 71.004 71.219 0 0 0 0 0.0075543 1 41453 33.787 20.91 1 NaN NaN 0 3285900 0 3285900 36748 1748 13885 14265 57598 57598 VENSIPAAGETQNVEVAAGPAGK 23 1 0 Unmodified _VENSIPAAGETQNVEVAAGPAGK_ 0 0 0 Q15020;B4DYA2;B4DRG9;F8VV04 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1109.0658 2 1105.0584 2208.10224 NaN NaN NaN 0.61577 0.00068046 NaN NaN NaN NaN 70.044 0.1419 70.044 70.003 70.145 0 0 0 0 7.3146E-05 1 41791 48.823 27.966 1 NaN NaN 0 3551600 0 3551600 36749 1748 13885 14265 57599 57599 VEPAVIEAQNAVK 13 1 0 Unmodified _VEPAVIEAQNAVK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.3878 2 684.380091 1366.74563 77899.84 0.66615 0.0004559 0.42282 0.00028937 1.089 0.00074527 684.380562836285 688.387440221282 63.297 0.46478 63.297 63.066 63.53 0 108 37 5 0 0 0 0.00036536 1 37190 62.466 44.647 1 3.9137 4.0683 0 9931300 3263300 6668000 36750 1729 13886 14266 57600 57600 VEPAVSSVVNSIQVLTSK 18 1 0 Unmodified _VEPAVSSVVNSIQVLTSK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;A2A2S5;Q32NB1 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.5223 2 929.020023 1856.02549 64328.77 1.0646 0.00098907 0.049042 4.5561E-05 1.1137 0.0010346 929.019669157066 933.027846408307 121.6 0.36815 121.6 121.47 121.84 0 108 24 5 0 0 0 6.24E-05 3 78709 54.276 54.276 1 0.80086 0.83785 0 12072000 6199800 5872700 36751 471 13887 14267 57601;57602;57603 57603 VEPAVSSVVNSIQVLTSK 18 1 0 Unmodified _VEPAVSSVVNSIQVLTSK_ 0 0 0 A0A0A0MRV0;A7BI36;Q9P2E9;A2A2S5;Q32NB1 A0A0A0MRV0 A0A0A0MRV0 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.5197 2 929.020023 1856.02549 63498.6 0.89139 0.00082812 0.41822 0.00038853 1.3096 0.0012167 929.523221601018 933.027482489412 121.15 0.52328 121.15 120.86 121.39 -7.6294E-06 106 31 6 0 0 0 1.4953E-11 4 80171 101.3 101.3 1 0.83971 0.87715 0 10927000 6811200 4116200 36752 471 13887 14267 57604;57605;57606;57607 57606 VEPFVCAQCR 10 0 1 Unmodified _VEPFVCAQCR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.2923 2 633.291908 1264.56926 77587.99 0.77199 0.0004889 0.01637 1.0367E-05 0.78836 0.00049926 633.291954259353 638.296328576661 50.018 0.40546 50.018 49.779 50.184 -3.8147E-06 113 36 4 0 0 0 0.0013769 2 27540 73.931 59.264 1 0.60262 0.6165 0 32434000 22260000 10173000 36753 591 13888 14268 57608;57609 57608 VEPFVCAQCR 10 0 1 Unmodified _VEPFVCAQCR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.2922 2 633.291908 1264.56926 76145.02 0.71557 0.00045316 -0.39716 -0.00025152 0.31841 0.00020164 633.292048278274 638.29553163196 48.722 0.44932 48.722 48.491 48.94 0 126 35 5 0 0 0 0.0016801 2 27244 72.547 60.954 1 0.62003 0.65279 0 23200000 13286000 9914400 36754 591 13888 14268 57610;57611 57610 VEPFVCAQCR 10 0 1 Unmodified _VEPFVCAQCR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.293 2 633.291908 1264.56926 76130.96 0.58401 0.00036985 -0.41275 -0.00026139 0.17126 0.00010846 633.29180295429 638.295817070563 57.239 0.58404 57.239 56.922 57.506 3.8147E-06 145 43 5 0 0 0 0.011437 2 29007 51.995 40.844 1 1.7641 1.4845 0 4516300 1662700 2853600 36755 591 13888 14268 57612;57613 57613 VEPFVCAQCR 10 0 1 Unmodified _VEPFVCAQCR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.2968 2 633.291908 1264.56926 77133.9 0.63774 0.00040387 -0.16328 -0.0001034 0.47446 0.00030047 633.291930285426 638.295911721645 57.616 0.44925 57.616 57.352 57.802 0 127 31 5 0 0 0 0.012259 2 28521 50.878 38.831 1 1.7999 1.5208 0 4723100 1543900 3179300 36756 591 13888 14268 57614;57615 57615 VEPGLGADNSVVR 13 0 1 Unmodified _VEPGLGADNSVVR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.8468 2 656.846416 1311.67828 76150.43 0.5401 0.00035477 -0.27184 -0.00017856 0.26827 0.00017621 656.846635052521 661.849894061085 53.514 0.54314 53.514 53.26 53.803 0 219 52 6 0 0 0 0.00019093 1 30586 70.942 59.777 1 1.1048 1.1756 0 24302000 11620000 12682000 36757 1504 13889 14269 57616 57616 VEPGLGADNSVVR 13 0 1 Unmodified _VEPGLGADNSVVR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.8507 2 656.846416 1311.67828 74874.65 0.40781 0.00026787 0.27843 0.00018289 0.68624 0.00045075 656.846429888954 661.851008153409 63.252 0.551 63.252 63.001 63.552 -3.8147E-06 172 49 5 0 0 0 0.0025655 1 32585 53.237 53.237 1 3.0862 2.5984 0 4576400 1319300 3257100 36758 1504 13889 14269 57617 57617 VEPGLGADNSVVR 13 0 1 Unmodified _VEPGLGADNSVVR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 661.8509 2 656.846416 1311.67828 75953.31 0.3588 0.00023568 -0.075592 -4.9652E-05 0.28321 0.00018603 657.347726933487 661.850378328789 63.825 0.48455 63.825 63.601 64.085 -3.8147E-06 174 41 5 0 0 0 0.0059861 1 32180 46.706 46.706 1 2.898 2.5528 0 4120800 1220000 2900800 36759 1504 13889 14269 57618 57618 VEPSDNGPLFTELK 14 1 0 Unmodified _VEPSDNGPLFTELK_ 0 0 0 A8K245;Q99986 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.9279 2 773.393396 1544.77224 68735.96 0.99416 0.00076887 -0.30691 -0.00023736 0.68724 0.00053151 773.393246487873 777.400143628446 91.661 0.54032 91.661 91.419 91.959 0 188 43 7 0 0 0 0.00038169 1 55522 70.488 70.488 1 1.4209 1.5564 0 52339000 23192000 29147000 36760 707 13890 14270 57619 57619 VEPSDNGPLFTELK 14 1 0 Unmodified _VEPSDNGPLFTELK_ 0 0 0 A8K245;Q99986 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 773.395 2 773.393396 1544.77224 69325.41 0.91098 0.00070454 0.041251 3.1903E-05 0.95223 0.00073645 773.895144532619 777.400067039162 90.755 0.51213 90.755 90.564 91.076 0 165 38 5 0 0 0 0.00011813 1 56226 82.171 74.284 1 1.3127 1.4676 0 86905000 37660000 49245000 36761 707 13890 14270 57620 57620 VEPSDNGPLFTELK 14 1 0 Unmodified _VEPSDNGPLFTELK_ 0 0 0 A8K245;Q99986 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 773.3941 2 773.393396 1544.77224 69683.86 0.76732 0.00059344 -0.1025 -7.9274E-05 0.66481 0.00051416 773.895131610616 777.400144927811 104.83 0.87605 104.83 104.45 105.33 0 301 50 8 0 0 0 0.00048597 2 59683 60.49 60.49 1 1.04 0.81741 0 11194000 5509100 5684600 36762 707 13890 14270 57621;57622 57622 VEPSDNGPLFTELK 14 1 0 Unmodified _VEPSDNGPLFTELK_ 0 0 0 A8K245;Q99986 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 777.4012 2 773.393396 1544.77224 70780.89 0.64296 0.00049726 -0.12186 -9.425E-05 0.52109 0.00040301 773.393192171468 777.400143366819 104.65 0.87331 104.65 104.29 105.16 7.6294E-06 304 50 9 0 0 0 0.00018442 2 58614 71.555 71.555 1 1.0145 0.83819 0 11612000 6274400 5338000 36763 707 13890 14270 57623;57624 57623 VEPVGDVVSTR 11 0 1 Unmodified _VEPVGDVVSTR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.3116 2 579.311677 1156.6088 78775.78 0.30568 0.00017709 0.40131 0.00023248 0.70699 0.00040957 579.311921109493 584.315874745865 50.104 0.85972 50.104 49.809 50.668 3.8147E-06 457 81 8 0 0 0 0.001099 2 27586 70.1 53.56 1 1.6573 1.9661 0 669200000 242840000 426350000 36764 1569 13891 14271 57625;57626 57626 VEPVGDVVSTR 11 0 1 Unmodified _VEPVGDVVSTR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.3165 2 579.311677 1156.6088 78336.88 0.51905 0.00030069 -0.10577 -6.1276E-05 0.41328 0.00023942 579.311702974595 584.315704861677 48.843 1.1214 48.843 48.557 49.679 0 582 92 10 0 0 0 0.00104 2 27266 70.552 46.783 1 1.4912 1.7429 0 587500000 208280000 379220000 36765 1569 13891 14271 57627;57628 57627 VEPVGDVVSTR 11 0 1 Unmodified _VEPVGDVVSTR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.3161 2 579.311677 1156.6088 78660.02 0.5844 0.00033855 0.12061 6.9869E-05 0.705 0.00040842 579.311788377453 584.315781743035 57.54 1.6512 57.54 57.146 58.797 -3.8147E-06 544 124 9 0 0 0 0.0081744 2 29018 51.276 31.499 1 2.7765 2.3883 0 49243000 13598000 35645000 36766 1569 13891 14271 57629;57630 57629 VEPVGDVVSTR 11 0 1 Unmodified _VEPVGDVVSTR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.3157 2 579.311677 1156.6088 78387.79 0.44934 0.00026031 0.091196 5.2831E-05 0.54054 0.00031314 579.311771902141 584.315799791214 58.017 1.6375 58.017 57.544 59.181 0 610 124 9 0 0 0 0.0036568 2 28647 59.426 42.968 1 2.9448 2.569 0 47511000 12899000 34612000 36767 1569 13891 14271 57631;57632 57632 VEPVGDVVSTRDPVK 15 1 1 Unmodified _VEPVGDVVSTRDPVK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.3014 3 532.957905 1595.85189 81608.58 0.58986 0.00031437 0.022962 1.2238E-05 0.61283 0.00032661 532.957752434369 538.965328038571 55.719 0.66676 55.719 55.497 56.164 0 232 49 7 0 0 0 0.001226 2 31230 36.638 30.057 1 1.8056 2.1617 0 56539000 24628000 31912000 36768 1569 13892 14272 57633;57634 57633 VEPVGDVVSTRDPVK 15 1 1 Unmodified _VEPVGDVVSTRDPVK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.9474 2 798.933219 1595.85189 NaN NaN NaN 0.51573 0.00041203 NaN NaN NaN NaN 55.68 0.41206 55.68 55.548 55.96 0 0 0 0 0.0081284 1 31255 69.03 45.711 1 NaN NaN 0 10098000 0 10098000 36769 1569 13892 14272 57635 57635 VEPVGDVVSTRDPVK 15 1 1 Unmodified _VEPVGDVVSTRDPVK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.4483 2 798.933219 1595.85189 69221.63 0.91217 0.00072877 0.26967 0.00021545 1.1818 0.00094421 798.933300626836 807.945076582039 54.435 0.34913 54.435 54.31 54.659 -3.8147E-06 91 27 5 0 0 0 0.0033801 1 31072 53.448 47.215 1 1.8961 2.1595 0 19460000 6633500 12827000 36770 1569 13892 14272 57636 57636 VEPVGDVVSTRDPVK 15 1 1 Unmodified _VEPVGDVVSTRDPVK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.9652 3 532.957905 1595.85189 82089.78 0.83473 0.00044488 -0.13386 -7.134E-05 0.70087 0.00037354 532.957794037406 538.965231184937 54.466 0.5611 54.466 54.261 54.822 3.8147E-06 252 45 8 0 0 0 0.00019549 2 31211 53.169 53.169 1 1.7125 2.0167 0 89553000 35189000 54364000 36771 1569 13892 14272 57637;57638 57638 VEPVGDVVSTRDPVK 15 1 1 Unmodified _VEPVGDVVSTRDPVK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.9655 3 532.957905 1595.85189 81558.09 0.5554 0.00029601 -0.21012 -0.00011198 0.34529 0.00018402 532.957809263615 538.965244854826 64.927 1.3014 64.927 64.59 65.891 0 438 97 8 0 0 0 0.0022503 1 33417 38.337 38.337 1 3.0068 2.6557 0 41900000 9189600 32710000 36772 1569 13892 14272 57639 57639 VEPVGDVVSTRDPVK 15 1 1 Unmodified _VEPVGDVVSTRDPVK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.9446 2 798.933219 1595.85189 68249.13 0.60663 0.00048466 0.050935 4.0694E-05 0.65756 0.00052535 798.933354705646 807.944555904807 64.935 0.69691 64.935 64.649 65.346 0 259 53 7 0 0 0 8.9541E-05 1 33428 88.021 88.021 1 3.2583 2.8039 0 11646000 2479300 9166800 36773 1569 13892 14272 57640 57640 VEPVGDVVSTRDPVK 15 1 1 Unmodified _VEPVGDVVSTRDPVK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.9656 3 532.957905 1595.85189 82059.74 0.33976 0.00018108 -0.0091426 -4.8726E-06 0.33062 0.00017621 532.957907230829 538.965341438781 65.379 1.1482 65.379 65.064 66.212 0 417 85 8 0 0 0 0.037609 2 32915 21.247 21.247 1 2.8801 2.4492 0 32387000 8823200 23564000 36774 1569 13892 14272 57641;57642 57641 VEPVGDVVSTRDPVK 15 1 1 Unmodified _VEPVGDVVSTRDPVK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 807.9449 2 798.933219 1595.85189 67528.63 0.38194 0.00030514 0.18284 0.00014608 0.56478 0.00045122 798.933363965155 807.944555187517 65.375 0.7928 65.375 65.107 65.9 0 237 59 7 0 0 0 0.0011913 2 32929 70.089 70.089 1 3.1622 2.6757 0 11557000 2821700 8735300 36775 1569 13892 14272 57643;57644 57643 VEPVGNAPLLALVHK 15 1 0 Unmodified _VEPVGNAPLLALVHK_ 0 0 0 Q14669 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.3154 3 519.643481 1555.90861 NaN NaN NaN 0.046071 2.394E-05 NaN NaN NaN NaN 100.6 0.38965 100.6 100.39 100.78 0 0 0 0 0.005273 1 63220 44.457 23.504 1 NaN NaN 0 4860600 0 4860600 36776 1736 13893 14273 57645 57645 VEPYSLTAQQSSLIR 15 0 1 Unmodified _VEPYSLTAQQSSLIR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.9544 2 846.451776 1690.889 NaN NaN NaN 0.036245 3.068E-05 NaN NaN NaN NaN 87.321 0.16465 87.321 87.251 87.415 0 0 0 0 0.00020184 1 52707 77.593 51.55 1 NaN NaN 0 4789500 4789500 0 36777 406 13894 14274 57646 57646 VEPYSLTAQQSSLIR 15 0 1 Unmodified _VEPYSLTAQQSSLIR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.4521 2 846.451776 1690.889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.241 1 87.241 86.741 87.741 -7.6294E-06 0 0 0 0.025011 1 52664 42.976 25.112 1 36778 406 13894 14274 57647 57647 VEPYSLTAQQSSLIR 15 0 1 Unmodified _VEPYSLTAQQSSLIR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.3939 2 846.451776 1690.889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.499 1 87.499 86.999 87.999 0 0 0 0 0.004323 1 52801 54.023 28.085 1 36779 406 13894 14274 57648 57648 VEPYSLTAQQSSLIR 15 0 1 Unmodified _VEPYSLTAQQSSLIR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.4518 2 846.451776 1690.889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.48 1 86.48 85.98 86.98 0 0 0 0 0.0013971 1 53307 72.29 37.598 1 36780 406 13894 14274 57649 57649 VEPYSLTAQQSSLIR 15 0 1 Unmodified _VEPYSLTAQQSSLIR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.4528 2 846.451776 1690.889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.586 1 86.586 86.086 87.086 -7.6294E-06 0 0 0 0.001614 1 53373 69.03 38.466 1 36781 406 13894 14274 57650 57650 VEPYSLTAQQSSLIR 15 0 1 Unmodified _VEPYSLTAQQSSLIR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 846.451 2 846.451776 1690.889 67640.24 0.48683 0.00041208 0.19843 0.00016796 0.68526 0.00058004 846.451946457398 851.455959432859 100.21 0.41418 100.21 100.1 100.52 7.6294E-06 135 37 5 0 0 0 0.012137 2 56688 36.284 36.284 1 0.7981 0.67792 0 5234700 2481000 2753700 36782 406 13894 14274 57651;57652 57651 VEPYSLTAQQSSLIR 15 0 1 Unmodified _VEPYSLTAQQSSLIR_ 0 0 0 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 846.4527 2 846.451776 1690.889 67116.62 0.49371 0.0004179 -0.18156 -0.00015368 0.31216 0.00026423 846.953054623633 851.455740235639 100.18 0.43164 100.18 99.961 100.39 0 145 37 5 0 0 0 0.026418 1 55722 28.764 28.764 1 0.79625 0.70422 0 4046000 2058700 1987200 36783 406 13894 14274 57653 57653 VEPYSLTAQQSSLIREDK 18 1 1 Unmodified _VEPYSLTAQQSSLIREDK_ 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88;A0A087WWG9;B4E0F9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.6998 3 688.691776 2063.0535 74147.75 0.60544 0.00041696 -0.039661 -2.7314E-05 0.56578 0.00038965 688.691776129402 694.699204381429 85.242 0.29331 85.242 85.066 85.359 0 77 18 6 0 0 0 0.056396 1 45791 16.306 6.9008 1 0.97308 0.83176 0 2826800 1623000 1203900 36784 406 13895 14275 57654 57654 VEQATKPSFESGR 13 1 1 Unmodified _VEQATKPSFESGR_ 0 0 1 H0Y6E7;H3BT71;P38159;B4E352 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.3656 2 718.36243 1434.71031 72498.58 0.77524 0.0005569 0.62888 0.00045176 1.4041 0.0010087 718.363682909115 727.373577208045 22.705 0.40254 22.705 22.543 22.946 0 103 23 8 0 0 0 2.2636E-08 2 8680 121.02 92.623 1 1.5851 1.8257 0 27623000 12932000 14691000 36785 1284 13896 14276 57655;57656 57656 VEQATKPSFESGR 13 1 1 Unmodified _VEQATKPSFESGR_ 0 0 1 H0Y6E7;H3BT71;P38159;B4E352 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.2516 3 479.244045 1434.71031 87913.39 0.19676 9.4297E-05 -0.078444 -3.7594E-05 0.11832 5.6703E-05 479.244039685354 485.251430186053 22.703 0.37613 22.703 22.511 22.887 1.9073E-06 151 22 10 0 0 0 6.9502E-05 2 8675 84.566 62.52 1 1.4577 1.7498 0 62960000 27976000 34984000 36786 1284 13896 14276 57657;57658 57658 VEQATKPSFESGR 13 1 1 Unmodified _VEQATKPSFESGR_ 0 0 1 H0Y6E7;H3BT71;P38159;B4E352 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.3647 2 718.36243 1434.71031 72100 0.984 0.00070687 0.53361 0.00038333 1.5176 0.0010902 718.363687217085 727.373788045006 22.36 0.34684 22.36 22.241 22.588 0 75 14 8 0 0 0 7.4817E-18 2 8415 142.1 120.63 1 1.8844 2.1849 0 35562000 9093800 26468000 36787 1284 13896 14276 57659;57660 57660 VEQATKPSFESGR 13 1 1 Unmodified _VEQATKPSFESGR_ 0 0 1 H0Y6E7;H3BT71;P38159;B4E352 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.2436 3 479.244045 1434.71031 87116.79 0.49785 0.00023859 -0.41033 -0.00019665 0.087523 4.1945E-05 479.243850389462 485.251387534713 22.403 0.72446 22.403 22.241 22.965 -1.9073E-06 118 31 8 0 0 0 1.4636E-06 1 8438 89.231 66.51 1 2.0263 2.381 0 62782000 20558000 42224000 36788 1284 13896 14276 57661 57661 VEQATKPSFESGR 13 1 1 Unmodified _VEQATKPSFESGR_ 0 0 1 H0Y6E7;H3BT71;P38159;B4E352 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 479.2438 3 479.244045 1434.71031 86125.7 0.12751 6.1108E-05 -0.24844 -0.00011906 -0.12093 -5.7955E-05 479.243877876489 485.251447225844 25.11 0.54883 25.11 24.902 25.45 0 153 26 10 0 0 0 0.0022333 1 9110 39.509 25.251 1 0.83552 0.72999 0 24312000 14098000 10214000 36789 1284 13896 14276 57662 57662 VEQATKPSFESGR 13 1 1 Unmodified _VEQATKPSFESGR_ 0 0 1 H0Y6E7;H3BT71;P38159;B4E352 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.363 2 718.36243 1434.71031 71075.87 0.67801 0.00048706 -0.0084378 -6.0614E-06 0.66958 0.000481 718.362419272789 727.373507093 25.125 0.44957 25.125 24.932 25.382 0 133 25 8 0 0 0 0.00071842 1 8542 80.245 61.465 1 0.67663 0.5713 0 9230100 5467200 3762900 36790 1284 13896 14276 57663 57663 VEQATKPSFESGR 13 1 1 Unmodified _VEQATKPSFESGR_ 0 0 1 H0Y6E7;H3BT71;P38159;B4E352 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 479.2441 3 479.244045 1434.71031 86490.55 0.34369 0.00016471 -0.46881 -0.00022467 -0.12512 -5.9963E-05 479.243973284949 485.251384886965 25.132 0.53073 25.132 24.914 25.445 1.9073E-06 194 29 9 0 0 0 0.00013987 2 8552 62.042 45.904 1 0.78846 0.66814 0 15600000 8119500 7480100 36791 1284 13896 14276 57664;57665 57664 VEQESLLTAFR 11 0 1 Unmodified _VEQESLLTAFR_ 0 0 0 Q9UBB4;Q7Z524 Q9UBB4 Q9UBB4 ATXN10 Ataxin-10 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.8447 2 646.845884 1291.67722 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.133 1 95.133 94.633 95.633 0 0 0 0 0.004767 1 57817 65.347 15.534 1 36792 2095 13897 14277 57666 57666 VEQESLLTAFR 11 0 1 Unmodified _VEQESLLTAFR_ 0 0 0 Q9UBB4;Q7Z524 Q9UBB4 Q9UBB4 ATXN10 Ataxin-10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.8505 2 646.845884 1291.67722 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.279 1 95.279 94.779 95.779 0 0 0 0 0.0093513 1 57929 59.908 22.18 1 36793 2095 13897 14277 57667 57667 VEQFLTIAR 9 0 1 Unmodified _VEQFLTIAR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.785 2 538.808574 1075.60259 84280.34 0.77124 0.00041555 0.24763 0.00013342 1.0189 0.00054897 538.808419303283 543.813151262586 80.007 0.5372 80.007 79.879 80.416 0 179 42 6 0 0 0 0.015947 1 48762 94.85 41.296 1 0.72063 0.76578 0 24137000 13729000 10408000 36794 2002 13898 14278 57668 57668 VEQFLTIAR 9 0 1 Unmodified _VEQFLTIAR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.8133 2 538.808574 1075.60259 83493.98 0.61875 0.00033339 0.31791 0.00017129 0.93667 0.00050468 538.808611362748 543.813007744371 92.607 0.73901 92.607 92.331 93.07 0 199 42 8 0 0 0 0.0066968 2 51689 63.534 37.64 1 1.2599 1.083 0 6627000 3005200 3621800 36795 2002 13898 14278 57669;57670 57670 VEQFLTIAR 9 0 1 Unmodified _VEQFLTIAR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.8088 2 538.808574 1075.60259 83001.5 0.326 0.00017565 0.25059 0.00013502 0.57659 0.00031067 538.808513125402 543.812890895303 92.506 0.87383 92.506 92.13 93.004 0 203 48 7 0 0 0 0.011379 2 50656 58.433 35.942 1 1.2017 0.99701 0 5084300 2355700 2728600 36796 2002 13898 14278 57671;57672 57671 VEQLGAEGNVEESQK 15 1 0 Unmodified _VEQLGAEGNVEESQK_ 0 0 0 B3KRR1;B3KSL5;A0A0A6YYJ8;Q9Y383 B3KRR1 B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 808.8925 2 808.891748 1615.76894 68984.3 0.75441 0.00061024 0.0037194 3.0086E-06 0.75813 0.00061325 808.891664919759 812.898713539481 33.688 0.6167 33.688 33.348 33.965 0 225 60 7 0 0 0 4.7835E-11 2 16762 124.07 115.11 1 0.69629 0.68391 0 23217000 12270000 10946000 36797 494 13899 14279 57673;57674 57673 VEQLGAEGNVEESQK 15 1 0 Unmodified _VEQLGAEGNVEESQK_ 0 0 0 B3KRR1;B3KSL5;A0A0A6YYJ8;Q9Y383 B3KRR1 B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.892 2 808.891748 1615.76894 68595.67 0.40432 0.00032705 0.26209 0.000212 0.66641 0.00053905 808.892001936754 812.898944358666 33.08 0.38685 33.08 32.882 33.268 0 191 35 7 0 0 0 2.0645E-38 1 16468 166.48 152.32 1 0.72874 0.76779 0 35222000 21062000 14159000 36798 494 13899 14279 57675 57675 VEQLGAEGNVEESQK 15 1 0 Unmodified _VEQLGAEGNVEESQK_ 0 0 0 B3KRR1;B3KSL5;A0A0A6YYJ8;Q9Y383 B3KRR1 B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.8995 2 808.891748 1615.76894 67857.16 0.42008 0.0003398 0.052844 4.2745E-05 0.47292 0.00038254 808.892237783642 812.89923444331 38.949 0.56252 38.949 38.588 39.151 0 200 45 7 0 0 0 0.00050188 1 17707 56.122 41.703 1 0.50916 0.40803 0 7401000 4686100 2714900 36799 494 13899 14279 57676 57676 VEQLQQEYTEMK 12 1 0 Oxidation (M) _VEQLQQEYTEM(ox)K_ VEQLQQEYTEM(1)K VEQLQQEYTEM(96.01)K 0 1 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.8709 2 771.361238 1540.70792 NaN NaN NaN -0.1271 -9.804E-05 NaN NaN NaN NaN 37.014 0.20039 37.014 36.958 37.158 3.8147E-06 0 0 0 1.3504E-05 1 18788 96.015 81.897 1 NaN NaN 0 6618600 0 6618600 36800 1731;1802 13900 14280 57677 57677 1565 VEQLQQEYTEMK 12 1 0 Oxidation (M) _VEQLQQEYTEM(ox)K_ VEQLQQEYTEM(1)K VEQLQQEYTEM(147.74)K 0 1 0 Q14258;Q59GW5;D3DTY9 Q14258;Q59GW5 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 775.3689 2 771.361238 1540.70792 70536.2 0.8054 0.00062125 -0.025073 -1.9341E-05 0.78033 0.00060191 771.360844112382 775.368219316378 36.164 0.26716 36.164 36.002 36.269 0 74 22 5 0 0 0 1.2881E-18 1 18505 147.74 118 1 2.3941 2.4215 0 8924000 2255100 6668900 36801 1731;1802 13900 14280 57678 57678 1565 VEQVLSLEPQHELK 14 1 0 Unmodified _VEQVLSLEPQHELK_ 0 0 0 Q53XM7;O95292;E5RK64 Q53XM7 Q53XM7 VAPB Vesicle-associated membrane protein-associated protein B/C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.9562 2 824.948869 1647.88319 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.331 1 72.331 71.831 72.831 0 0 0 0 0.0029309 1 42318 58.274 42.644 1 36802 1423 13901 14281 57679 57679 VESHFDLELR 10 0 1 Unmodified _VESHFDLELR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 415.5472 3 415.547177 1243.6197 93653.19 0.066294 2.7548E-05 -0.037184 -1.5452E-05 0.02911 1.2097E-05 415.547154071257 418.883193584597 69.514 0.58657 69.514 69.157 69.744 0 208 48 6 0 0 0 0.012486 2 40290 31.597 22.275 1 0.80327 0.80693 0 17251000 10748000 6502900 36803 1854 13902 14282 57680;57681 57681 VESHFDLELR 10 0 1 Unmodified _VESHFDLELR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 415.5475 3 415.547177 1243.6197 93542.96 0.18552 7.7094E-05 -0.25145 -0.00010449 -0.065924 -2.7394E-05 415.547040133745 418.883084589858 67.81 0.45108 67.81 67.604 68.056 0 188 39 6 0 0 0 0.020961 2 40150 25.892 13.678 1 0.89335 0.9788 0 31279000 16522000 14756000 36804 1854 13902 14282 57682;57683 57683 VESLDVDSEAK 11 1 0 Unmodified _VESLDVDSEAK_ 0 0 0 Q53H03;P49321;E9PI86;O95138;Q5T626;Q6PJY7;Q5T624 Q53H03 Q53H03 NASP Nuclear autoantigenic sperm protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.2985 2 596.290608 1190.56666 76513.51 0.46765 0.00027885 -0.39798 -0.00023731 0.069669 4.1543E-05 596.289706372868 600.297845253887 39.731 0.47536 39.731 39.527 40.002 0 131 39 5 0 0 0 0.0033898 1 20590 59.908 44.246 1 1.4949 1.5574 0 16836000 6636300 10199000 36805 1579 13903 14283 57684 57684 VESLDVDSEAK 11 1 0 Unmodified _VESLDVDSEAK_ 0 0 0 Q53H03;P49321;E9PI86;O95138;Q5T626;Q6PJY7;Q5T624 Q53H03 Q53H03 NASP Nuclear autoantigenic sperm protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.2975 2 596.290608 1190.56666 77842.46 0.43718 0.00026068 -0.48805 -0.00029102 -0.050875 -3.0336E-05 596.289685417153 600.297647739015 38.799 0.41394 38.799 38.57 38.984 0 101 36 4 0 0 0 0.00022817 1 20428 91.584 67.429 1 1.453 1.5504 0 23160000 12372000 10788000 36806 1579 13903 14283 57685 57685 VESLESLYFTPIPAR 15 0 1 Unmodified _VESLESLYFTPIPAR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 866.4648 2 861.45907 1720.90359 NaN NaN NaN 0.96171 0.00082848 NaN NaN NaN NaN 116.17 0.37008 116.17 115.96 116.33 0 0 0 0 4.5793E-11 2 75868 116.55 72.776 1 NaN NaN 0 14395000 0 14395000 36807 186;1747 13904 14284 57686;57687 57687 VESLLVTAISK 11 1 0 Unmodified _VESLLVTAISK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.35 2 580.350271 1158.68599 NaN NaN NaN -0.11671 -6.7734E-05 NaN NaN NaN NaN 92.625 0.72823 92.625 92.234 92.963 0 0 0 0 0.0027751 1 56044 71.349 54.573 1 NaN NaN 0 7836200 7836200 0 36808 1379 13905 14285 57688 57688 VESLLVTAISK 11 1 0 Unmodified _VESLLVTAISK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.3524 2 580.350271 1158.68599 81441.74 0.56277 0.0003266 0.47855 0.00027773 1.0413 0.00060433 580.350414008565 584.357676874329 91.542 0.46857 91.542 91.14 91.609 7.6294E-06 122 41 5 0 0 0 0.00036959 1 56690 83.862 67.404 1 1.1051 1.1837 0 37097000 17546000 19550000 36809 1379 13905 14285 57689 57689 VESLLVTAISK 11 1 0 Unmodified _VESLLVTAISK_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.8516 2 580.350271 1158.68599 80817.38 0.59098 0.00034298 0.16979 9.8536E-05 0.76077 0.00044151 580.350472386065 584.35745573106 105.93 0.56146 105.93 105.63 106.19 0 97 28 5 0 0 0 0.055369 1 60407 33.961 33.961 1 1.1529 0.96741 0 1880100 938110 941940 36810 1379 13905 14285 57690 57690 VESLQEEIAFLK 12 1 0 Unmodified _VESLQEEIAFLK_ 0 0 0 V9HWE1;P08670;B0YJC4;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3903 2 703.3823 1404.75005 71581.2 1.2091 0.00085048 -0.14777 -0.00010394 1.0614 0.00074654 703.38221853193 707.389228426987 110.44 0.73074 110.44 110.12 110.85 0 336 51 12 0 0 0 5.3172E-39 2 69226 188.04 143.72 1 1.2883 1.5341 0 639500000 279030000 360470000 36811 1457 13906 14286 57691;57692 57691 VESLQEEIAFLK 12 1 0 Unmodified _VESLQEEIAFLK_ 0 0 0 V9HWE1;P08670;B0YJC4;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.3835 2 703.3823 1404.75005 71937.4 0.89439 0.0006291 -0.082598 -5.8098E-05 0.81179 0.000571 703.382217818573 707.389332437827 109.9 0.75793 109.9 109.52 110.28 7.6294E-06 276 47 9 0 0 0 4.6598E-19 2 70431 150.08 103.61 1 1.2945 1.5235 0 410720000 181230000 229490000 36812 1457 13906 14286 57693;57694 57694 VESLQEEIAFLK 12 1 0 Unmodified _VESLQEEIAFLK_ 0 0 0 V9HWE1;P08670;B0YJC4;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 703.3839 2 703.3823 1404.75005 68915.21 0.9002 0.00063319 0.87597 0.00061614 1.7762 0.0012493 703.383784787082 707.38968636544 122.03 0.56371 122.03 121.69 122.25 0 149 27 8 0 0 0 0.00022516 2 72734 83.862 54.095 1 2.9304 2.3737 0 24197000 6023700 18173000 36813 1457 13906 14286 57695;57696 57696 VESLQEEIAFLK 12 1 0 Unmodified _VESLQEEIAFLK_ 0 0 0 V9HWE1;P08670;B0YJC4;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.3827 2 703.3823 1404.75005 70737.07 0.83292 0.00058586 1.0844 0.00076272 1.9173 0.0013486 703.383846782188 707.389888758263 121.82 0.59223 121.82 121.45 122.04 0 147 28 8 0 0 0 0.0029259 2 71684 57.348 42.669 1 3.1722 2.594 0 26598000 6383700 20214000 36814 1457 13906 14286 57697;57698 57698 VESQEREDVLAGMSGK 16 1 1 Oxidation (M) _VESQEREDVLAGM(ox)SGK_ VESQEREDVLAGM(1)SGK VESQEREDVLAGM(48.66)SGK 0 1 1 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.4227 2 875.91744 1749.82033 64926.62 0.41428 0.00036287 1.5118 0.0013242 1.9261 0.0016871 876.422116990887 884.929183678614 25.822 0.34463 25.822 25.56 25.905 0 72 18 6 0 0 0 0.00053301 1 11314 48.659 48.659 1 0.6603 0.74758 0 23486000 13197000 10289000 36815 1679 13907 14287 57699 57699 1487 VESQEREDVLAGMSGK 16 1 1 Oxidation (M) _VESQEREDVLAGM(ox)SGK_ VESQEREDVLAGM(1)SGK VESQEREDVLAGM(47.09)SGK 0 1 1 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.2807 3 584.280719 1749.82033 78084.03 0.75588 0.00044165 0.18032 0.00010536 0.9362 0.000547 584.615409661042 590.28828695496 26.015 0.35 26.015 25.905 26.255 0 73 19 6 0 0 0 0.00024937 2 11486 47.09 41.186 1 0.79986 0.93563 0 31999000 20876000 11122000 36816 1679 13907 14287 57700;57701 57700 1487 VESQEREDVLAGMSGK 16 1 1 Oxidation (M) _VESQEREDVLAGM(ox)SGK_ VESQEREDVLAGM(1)SGK VESQEREDVLAGM(88.08)SGK 0 1 1 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 884.9274 2 875.91744 1749.82033 66065.46 1.0243 0.00089717 0.21402 0.00018747 1.2383 0.0010846 875.918071649989 884.928492914558 25.431 0.21483 25.431 25.328 25.543 0 35 8 6 0 0 0 3.214E-06 2 11069 88.075 79.33 1 0.59869 0.69019 0 28776000 17313000 11463000 36817 1679 13907 14287 57702;57703 57703 1487 VESQEREDVLAGMSGK 16 1 1 Oxidation (M) _VESQEREDVLAGM(ox)SGK_ VESQEREDVLAGM(1)SGK VESQEREDVLAGM(46.54)SGK 0 1 1 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.2878 3 584.280719 1749.82033 77686.6 0.92182 0.0005386 -0.31506 -0.00018408 0.60676 0.00035452 584.28029442903 590.288005152997 25.48 0.47668 25.48 25.304 25.781 0 104 24 6 0 0 0 0.0013806 1 11079 46.543 46.543 1 0.70547 0.82212 0 43994000 26511000 17483000 36818 1679 13907 14287 57704 57704 1487 VESQEREDVLAGMSGK 16 1 1 Unmodified _VESQEREDVLAGMSGK_ 0 0 1 Q71UH4;Q02880;B4DKD0;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.9489 3 578.949081 1733.82541 81123.73 0.33986 0.00019676 -0.80708 -0.00046726 -0.46722 -0.00027049 578.949022620801 585.289360871182 54.375 0.55501 54.375 54.138 54.693 0 145 43 6 0 0 0 0.007503 1 26519 24.287 13.653 1 1.3421 1.1557 0 2415500 1105600 1310000 36819 1679 13907 14288 57705 57705 VESTGAVPEFK 11 1 0 Unmodified _VESTGAVPEFK_ 0 0 0 B2R923;A0A024R159;Q6YN16;B4DWC7;B4E136 B2R923 B2R923 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.3088 2 582.300778 1162.587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.586 1 53.586 53.086 54.086 -3.8147E-06 0 0 0 0.035604 1 29998 46.462 3.5928 1 36820 70 13908 14289 57706 57706 VESVEPSENEASK 13 1 0 Unmodified _VESVEPSENEASK_ 0 0 0 Q9H307;A8K964;B4DTD4;B4E392 Q9H307 Q9H307 PNN Pinin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.8353 2 702.828086 1403.64162 73463.14 0.45436 0.00031934 0.40821 0.0002869 0.86257 0.00060624 702.828137894439 706.835603098853 22.544 0.24443 22.544 22.428 22.673 0 48 15 4 0 0 0 0.0024841 1 8575 53.569 53.569 1 1.6757 1.7287 0 4184000 1782000 2401900 36821 2028 13909 14290 57707 57707 VESVTAGSPLTNQFYLAAPR 20 0 1 Unmodified _VESVTAGSPLTNQFYLAAPR_ 0 0 0 H7C3J0;B4DKE1;Q6NUM9;I0EZ74 H7C3J0 H7C3J0 RETSAT All-trans-retinol 13,14-reductase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1061.0555 2 1061.05239 2120.09022 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.32 1 110.32 109.82 110.82 0 0 0 0 0.048219 1 69266 32.068 24.343 1 36822 988 13910 14291 57708 57708 VETDHIVAAVGLEPNVELAK 20 1 0 Unmodified _VETDHIVAAVGLEPNVELAK_ 0 0 0 O95831;A0A140VK04;E9PMA0 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 704.7208 3 702.047671 2103.12118 NaN NaN NaN 0.20633 0.00014485 NaN NaN NaN NaN 112.8 0.27156 112.8 112.66 112.93 0 0 0 0 0.035996 1 65548 25.207 17.495 1 NaN NaN 0 2240400 0 2240400 36823 1431 13911 14292 57709 57709 VETEAEDAALDCSVNSR 17 0 1 Unmodified _VETEAEDAALDCSVNSR_ 0 0 0 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 933.4136 2 933.412719 1864.81089 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.334 1 52.334 51.834 52.834 3.8147E-06 0 0 0 0.0055563 1 29820 50.207 41.694 1 36824 1822 13912 14293 57710 57710 VETEQAEIQELK 12 1 0 Unmodified _VETEQAEIQELK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.8644 2 708.864471 1415.71439 NaN NaN NaN 0.067148 4.7599E-05 NaN NaN NaN NaN 55.823 0.17959 55.823 55.685 55.865 0 0 0 0 1.1613E-37 1 31365 167.12 111.58 1 NaN NaN 0 5479800 5479800 0 36825 1581 13913 14294 57711 57711 VETEQAEIQELK 12 1 0 Unmodified _VETEQAEIQELK_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.3727 2 708.864471 1415.71439 75030.77 0.55024 0.00039005 -0.36265 -0.00025707 0.18759 0.00013298 708.864093649122 712.871394441106 54.774 0.44807 54.774 54.623 55.071 0 94 38 4 0 0 0 9.786E-18 3 31320 148.32 126.86 1 1.2784 1.3093 0 9398000 4769000 4629000 36826 1581 13913 14294 57712;57713;57714 57713 VETFSGVYK 9 1 0 Unmodified _VETFSGVYK_ 0 0 0 P62081 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.2664 2 515.266207 1028.51786 83820.74 0.34193 0.00017618 -0.11512 -5.932E-05 0.2268 0.00011686 515.266093381818 519.273077382766 50.582 0.5969 50.582 50.269 50.866 3.8147E-06 260 56 8 0 0 0 0.00022612 2 27833 105.57 34.655 1 0.97514 1.1561 0 481400000 246470000 234930000 36827 1631 13914 14295 57715;57716 57716 VETFSGVYK 9 1 0 Unmodified _VETFSGVYK_ 0 0 0 P62081 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.2734 2 515.266207 1028.51786 83833.54 0.31381 0.0001617 0.18174 9.3642E-05 0.49555 0.00025534 515.266193249025 519.273225235237 49.436 1.2352 49.436 48.912 50.147 0 523 102 8 0 0 0 0.00022612 3 27590 105.57 23.933 1 0.97813 1.1478 0 336800000 175980000 160820000 36828 1631 13914 14295 57717;57718;57719 57717 VETFSGVYK 9 1 0 Unmodified _VETFSGVYK_ 0 0 0 P62081 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 519.2734 2 515.266207 1028.51786 83830.04 0.3709 0.00019111 -0.19365 -9.9783E-05 0.17725 9.133E-05 515.266109006633 519.273208794852 58.339 1.5055 58.339 57.971 59.477 0 687 116 10 0 0 0 0.0034791 3 30009 71.692 19.592 1 0.92024 0.75878 0 41590000 20473000 21117000 36829 1631 13914 14295 57720;57721;57722 57722 VETFSGVYK 9 1 0 Unmodified _VETFSGVYK_ 0 0 0 P62081 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.2733 2 515.266207 1028.51786 83572.12 0.23365 0.00012039 -0.14783 -7.6173E-05 0.085815 4.4218E-05 515.266125281113 519.273228914869 58.933 1.7428 58.933 58.338 60.081 3.8147E-06 735 135 10 0 0 0 0.0018606 4 29188 79.906 23.896 1 0.87783 0.73025 0 38720000 20724000 17996000 36830 1631 13914 14295 57723;57724;57725;57726 57724 VETGVLK 7 1 0 Unmodified _VETGVLK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q14222 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 377.2335 2 373.226354 744.438155 97085.32 0.28531 0.00010649 0.086194 3.217E-05 0.3715 0.00013866 373.226229635226 377.233455166098 28.201 1.0287 28.201 27.838 28.866 1.9073E-06 330 67 7 0 0 0 0.026953 2 13071 83.614 24.005 1 2.6945 3.207 0 619290000 182790000 436510000 36831 1658 13915 14296 57727;57728 57727 VETGVLK 7 1 0 Unmodified _VETGVLK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q14222 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 377.2334 2 373.226354 744.438155 NaN NaN NaN -0.093532 -3.4909E-05 NaN NaN NaN NaN 27.639 0.71042 27.639 27.401 28.111 0 0 0 0 0.029404 1 12850 86.866 27.225 1 NaN NaN 0 677170000 0 677170000 36832 1658 13915 14296 57729 57729 VETGVLK 7 1 0 Unmodified _VETGVLK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q14222 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.2261 2 373.226354 744.438155 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.64 1 27.64 27.14 28.14 -1.9073E-06 0 0 0 0.02074 1 12914 78.616 21.725 1 36833 1658 13915 14296 57730 57730 VETGVLK 7 1 0 Unmodified _VETGVLK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q16577;Q14222 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 377.2335 2 373.226354 744.438155 97791.36 0.0020746 7.7428E-07 -0.33339 -0.00012443 -0.33131 -0.00012366 373.22570048123 377.233417278928 31.232 0.74733 31.232 31.02 31.767 0 184 45 7 0 0 0 0.03153 1 13119 66.993 27.775 1 1.956 1.5425 0 10837000 3465600 7371000 36834 1658 13915 14296 57731 57731 VETGVLKPGMVVTFAPVNVTTEVK 24 2 0 Oxidation (M) _VETGVLKPGM(ox)VVTFAPVNVTTEVK_ VETGVLKPGM(1)VVTFAPVNVTTEVK VETGVLKPGM(74.58)VVTFAPVNVTTEVK 0 1 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 850.142 3 844.464497 2530.37166 65756.14 1.023 0.00086386 -0.35938 -0.00030348 0.66358 0.00056037 844.798786726717 850.141363308513 108.38 1.1211 108.38 107.93 109.05 7.6294E-06 699 80 13 0 0 0 5.1662E-13 2 67951 74.579 74.579 1 3.9348 4.6403 0 473230000 98255000 374970000 36835 1658 13916 14297 57732;57733 57733 1438 VETGVLKPGMVVTFAPVNVTTEVK 24 2 0 Oxidation (M) _VETGVLKPGM(ox)VVTFAPVNVTTEVK_ VETGVLKPGM(1)VVTFAPVNVTTEVK VETGVLKPGM(109.39)VVTFAPVNVTTEVK 0 1 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 850.1428 3 844.464497 2530.37166 65616.26 0.8546 0.00072168 -0.40267 -0.00034004 0.45193 0.00038164 844.798688509713 850.141326467412 107.71 1.2719 107.71 107.25 108.52 0 718 89 13 0 0 0 1.9688E-21 2 68580 109.39 109.39 1 3.8938 4.5408 0 304640000 60502000 244140000 36836 1658 13916 14297 57734;57735 57735 1438 VETGVLKPGMVVTFAPVNVTTEVK 24 2 0 Oxidation (M) _VETGVLKPGM(ox)VVTFAPVNVTTEVK_ VETGVLKPGM(1)VVTFAPVNVTTEVK VETGVLKPGM(43.3)VVTFAPVNVTTEVK 0 1 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 844.7986 3 844.464497 2530.37166 65764.67 0.88462 0.00074703 -0.59835 -0.00050529 0.28627 0.00024174 844.798338509737 850.141204709078 118.82 0.5916 118.82 118.57 119.17 0 166 26 12 0 0 0 3.9072E-06 1 69265 43.303 43.303 1 0.98114 0.83737 0 60577000 28725000 31852000 36837 1658 13916 14297 57736 57736 1438 VETGVLKPGMVVTFAPVNVTTEVK 24 2 0 Unmodified _VETGVLKPGMVVTFAPVNVTTEVK_ 0 0 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.8111 3 839.132859 2514.37675 64735.71 0.51488 0.00043205 -0.018237 -1.5303E-05 0.49664 0.00041675 839.801188355531 844.810204524967 114.39 0.5808 114.39 114.11 114.7 -7.6294E-06 199 40 7 0 0 0 4.2956E-21 1 72543 108.77 108.77 1 2.4243 2.8626 0 36715000 8787100 27928000 36838 1658 13916 14298 57737 57737 VETGVLKPGMVVTFAPVNVTTEVK 24 2 0 Unmodified _VETGVLKPGMVVTFAPVNVTTEVK_ 0 0 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 844.8104 3 839.132859 2514.37675 65508.39 0.52887 0.00044379 0.14829 0.00012443 0.67716 0.00056823 839.468016625853 844.810177550749 113.72 0.4978 113.72 113.52 114.01 -7.6294E-06 224 36 9 0 0 0 5.1054E-09 1 73793 52.79 52.79 1 1.9305 2.2332 0 40180000 10547000 29633000 36839 1658 13916 14298 57738 57738 VETGVLKPGMVVTFAPVNVTTEVK 24 2 0 Unmodified _VETGVLKPGMVVTFAPVNVTTEVK_ 0 0 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 844.8104 3 839.132859 2514.37675 64435.27 0.73922 0.0006203 0.15671 0.0001315 0.89593 0.00075181 839.467279091171 844.810234489543 125.36 0.80137 125.36 125.09 125.89 0 227 31 14 0 0 0 1.5467E-13 2 75164 84.942 84.942 1 2.0731 1.7566 0 66716000 21225000 45491000 36840 1658 13916 14298 57739;57740 57739 VETGVLKPGMVVTFAPVNVTTEVK 24 2 0 Unmodified _VETGVLKPGMVVTFAPVNVTTEVK_ 0 0 1 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;B4DNE0;Q53G89;Q9NZS6;Q6P4C9;B4E2C5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q14222 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 844.8106 3 839.132859 2514.37675 64799.39 0.77273 0.00064842 -0.19528 -0.00016387 0.57745 0.00048455 839.466900541318 844.810045404357 125.21 0.95125 125.21 124.87 125.82 0 258 42 14 0 0 0 4.9588E-13 2 74171 79.426 79.426 1 1.8631 1.5938 0 89417000 30343000 59074000 36841 1658 13916 14298 57741;57742 57742 VETPVLPPVLVPR 13 0 1 Unmodified _VETPVLPPVLVPR_ 0 0 0 H0YMP2;H0YL71;H3BP09;H3BVD1;K7EJX0;Q59F45;A0A024R5Z3;A0A024RDR3;B7Z5N5;Q53XR6;P84022;Q15796;O15198 H0YMP2 H0YMP2 SMAD3;SMAD2;SMAD9 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 3;Mothers against decapentaplegic homolog 2;Mothers against decapentaplegic homolog 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.439 2 708.43467 1414.85479 73223.13 1.0722 0.0007596 -0.45448 -0.00032197 0.61775 0.00043763 708.434016379792 713.438422977962 117.02 0.44416 117.02 116.79 117.24 0 131 32 5 0 0 0 2.7001E-06 2 74794 109.29 109.29 1 1.6486 1.6805 0 9931400 3692600 6238800 36842 192 13917 14299 57743;57744 57743 VETPVLPPVLVPR 13 0 1 Unmodified _VETPVLPPVLVPR_ 0 0 0 H0YMP2;H0YL71;H3BP09;H3BVD1;K7EJX0;Q59F45;A0A024R5Z3;A0A024RDR3;B7Z5N5;Q53XR6;P84022;Q15796;O15198 H0YMP2 H0YMP2 SMAD3;SMAD2;SMAD9 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 3;Mothers against decapentaplegic homolog 2;Mothers against decapentaplegic homolog 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.4349 2 708.43467 1414.85479 74057.14 0.7686 0.0005445 -0.094061 -6.6636E-05 0.67454 0.00047786 708.434172703886 713.438929097634 116.49 0.40511 116.49 116.25 116.66 7.6294E-06 113 25 6 0 0 0 0.00019161 2 76258 70.908 70.908 1 1.6307 1.6359 0 17492000 8411800 9080300 36843 192 13917 14299 57745;57746 57746 VETPVLPPVLVPR 13 0 1 Unmodified _VETPVLPPVLVPR_ 0 0 0 H0YMP2;H0YL71;H3BP09;H3BVD1;K7EJX0;Q59F45;A0A024R5Z3;A0A024RDR3;B7Z5N5;Q53XR6;P84022;Q15796;O15198 H0YMP2 H0YMP2 SMAD3;SMAD2;SMAD9 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 3;Mothers against decapentaplegic homolog 2;Mothers against decapentaplegic homolog 9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.4398 2 708.43467 1414.85479 74836.2 0.88307 0.0006256 0.12226 8.6614E-05 1.0053 0.00071221 708.43471083636 713.438788902739 128.7 0.45178 128.7 128.49 128.95 0 83 17 6 0 0 0 0.00046791 2 76874 61.78 61.78 1 1.248 1.1121 0 1952000 721690 1230300 36844 192 13917 14299 57747;57748 57747 VETTEDLVAK 10 1 0 Unmodified _VETTEDLVAK_ 0 0 0 P38117 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.7999 2 552.792786 1103.57102 NaN NaN NaN 0.074781 4.1338E-05 NaN NaN NaN NaN 46.541 0.45565 46.541 46.305 46.76 0 0 0 0 0.02954 2 21914 52.126 33.215 1 NaN NaN 0 1341600 0 1341600 36845 1551 13918 14300 57749;57750 57750 VETYLNENLR 10 0 1 Unmodified _VETYLNENLR_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.8232 2 625.822409 1249.63027 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.164 1 61.164 60.664 61.664 0 0 0 0 0.0057873 1 34967 74.92 36.627 1 36846 803 13919 14301 57751 57751 VEVDTFMEAYDQK 13 1 0 Oxidation (M) _VEVDTFM(ox)EAYDQK_ VEVDTFM(1)EAYDQK VEVDTFM(81.52)EAYDQK 0 1 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.3621 2 795.853246 1589.69194 69288.02 0.63538 0.00050567 -0.1099 -8.7465E-05 0.52548 0.0004182 795.853629725793 799.860388590387 70.059 0.66064 70.059 69.785 70.446 0 215 59 6 0 0 0 6.7035E-05 2 40725 81.525 75.084 1 1.5092 1.5506 0 14485000 6425400 8059300 36847 2133 13920 14302 57752;57753 57752 1966 VEVDTFMEAYDQK 13 1 0 Oxidation (M) _VEVDTFM(ox)EAYDQK_ VEVDTFM(1)EAYDQK VEVDTFM(54.47)EAYDQK 0 1 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.8621 2 795.853246 1589.69194 NaN NaN NaN -0.11841 -9.4233E-05 NaN NaN NaN NaN 69.509 0.57515 69.509 69.22 69.795 0 0 0 0 0.0023219 1 40218 54.471 54.471 1 NaN NaN 0 8597200 0 8597200 36848 2133 13920 14302 57754 57754 1966 VEVDTFMEAYDQK 13 1 0 Oxidation (M) _VEVDTFM(ox)EAYDQK_ VEVDTFM(1)EAYDQK VEVDTFM(94.47)EAYDQK 0 1 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.8613 2 795.853246 1589.69194 69846.38 0.81935 0.00065208 -0.35553 -0.00028295 0.46383 0.00036914 796.353977771063 799.86017889731 69.109 0.5697 69.109 68.829 69.399 0 214 47 6 0 0 0 3.7449E-05 2 41234 94.465 83.708 1 1.7432 1.8716 0 21425000 7665400 13760000 36849 2133 13920 14302 57755;57756 57756 1966 VEVDTFMEAYDQK 13 1 0 Oxidation (M) _VEVDTFM(ox)EAYDQK_ VEVDTFM(1)EAYDQK VEVDTFM(101.39)EAYDQK 0 1 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.8606 2 795.853246 1589.69194 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.503 1 68.503 68.003 69.003 0 0 0 0 8.3991E-07 1 40710 101.39 85.854 1 36850 2133 13920 14302 57757 57757 1966 VEVDTFMEAYDQK 13 1 0 Oxidation (M) _VEVDTFM(ox)EAYDQK_ VEVDTFM(1)EAYDQK VEVDTFM(52.69)EAYDQK 0 1 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 795.8542 2 795.853246 1589.69194 68161.94 0.49892 0.00039706 -0.22146 -0.00017625 0.27746 0.00022081 795.853164199322 799.859815649688 79.921 0.42165 79.921 79.728 80.15 0 75 25 4 0 0 0 0.0013077 1 42273 52.693 51.319 1 0.83332 0.65735 0 2027400 1269000 758410 36851 2133 13920 14302 57758 57758 1966 VEVNIPR 7 0 1 Unmodified _VEVNIPR_ 0 0 0 B3KPC1;A0A024QZR3;Q9BRX2 B3KPC1 B3KPC1 hCG_2002731;PELO Protein pelota homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.7463 2 413.742702 825.470852 94997.14 0.25247 0.00010446 -0.35062 -0.00014507 -0.098145 -4.0607E-05 413.742675144317 418.74637050383 51.712 0.46209 51.712 51.548 52.01 3.8147E-06 99 38 4 0 0 0 0.026774 1 28662 78.616 32.245 1 1.245 1.2969 0 13402000 5617200 7785300 36852 26 13921 14303 57759 57759 VEVNTNSGEIIHK 13 1 0 Unmodified _VEVNTNSGEIIHK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 480.5877 3 480.587812 1438.74161 86411.76 0.5403 0.00025966 0.24925 0.00011979 0.78955 0.00037945 480.58797525742 483.259429101599 38.051 0.6167 38.051 37.814 38.431 0 259 51 8 0 0 0 0.00057155 2 19452 56.122 56.122 1 0.86938 0.99971 0 204780000 96003000 108780000 36853 1942 13922 14304 57760;57761 57761 VEVNTNSGEIIHK 13 1 0 Unmodified _VEVNTNSGEIIHK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.3868 2 720.37808 1438.74161 71614.73 1.1289 0.0008132 0.39912 0.00028751 1.528 0.0011007 720.378249954736 724.385257579386 38.085 0.30973 38.085 37.908 38.218 0 131 26 6 0 0 0 1.9152E-38 2 19464 193.96 193.96 1 0.85757 0.94768 0 57156000 30082000 27073000 36854 1942 13922 14304 57762;57763 57763 VEVNTNSGEIIHK 13 1 0 Unmodified _VEVNTNSGEIIHK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.3796 2 720.37808 1438.74161 72261.59 0.80159 0.00057745 0.31142 0.00022434 1.113 0.00080178 720.378463451726 724.385500932842 36.956 0.42791 36.956 36.729 37.157 0 185 32 9 0 0 0 2.5798E-06 2 19035 122.69 122.69 1 0.8358 0.93526 0 84399000 44400000 39999000 36855 1942 13922 14304 57764;57765 57764 VEVNTNSGEIIHK 13 1 0 Unmodified _VEVNTNSGEIIHK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.5872 3 480.587812 1438.74161 86767.54 0.35803 0.00017207 0.26442 0.00012708 0.62245 0.00029914 480.587986407875 483.259272891073 36.963 0.75898 36.963 36.613 37.372 0 287 58 10 0 0 0 7.8757E-14 2 19055 127.02 119.04 1 0.83963 0.98088 0 279910000 157700000 122210000 36856 1942 13922 14304 57766;57767 57767 VEVNTNSGEIIHK 13 1 0 Unmodified _VEVNTNSGEIIHK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.2591 3 480.587812 1438.74161 86664.7 0.18867 9.0671E-05 -0.22537 -0.00010831 -0.036703 -1.7639E-05 480.58781390932 483.25909862546 43.799 1.0021 43.799 43.497 44.499 0 400 68 11 0 0 0 0.00071112 2 20689 54.276 54.276 1 1.4614 1.1857 0 26261000 10809000 15451000 36857 1942 13922 14304 57768;57769 57769 VEVNTNSGEIIHK 13 1 0 Unmodified _VEVNTNSGEIIHK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 724.3854 2 720.37808 1438.74161 71720.48 0.69517 0.00050079 -0.1532 -0.00011036 0.54197 0.00039043 720.37809163609 724.384653042592 43.784 0.63273 43.784 43.537 44.17 0 191 45 7 0 0 0 0.00017825 2 20760 80.706 80.706 1 1.6916 1.3346 0 5429700 2391300 3038400 36858 1942 13922 14304 57770;57771 57771 VEVNTNSGEIIHK 13 1 0 Unmodified _VEVNTNSGEIIHK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.2591 3 480.587812 1438.74161 87190.17 0.28183 0.00013545 -0.49262 -0.00023675 -0.21079 -0.0001013 480.587712332559 483.259043732311 43.872 0.79615 43.872 43.546 44.342 0 310 52 9 0 0 0 0.0026451 2 20167 43.761 43.761 1 1.4748 1.1823 0 21880000 8441700 13438000 36859 1942 13922 14304 57772;57773 57772 VEVNTNSGEIIHK 13 1 0 Unmodified _VEVNTNSGEIIHK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 724.3854 2 720.37808 1438.74161 71737.8 0.63275 0.00045582 -0.1289 -9.2854E-05 0.50386 0.00036297 720.378048775146 724.38459962162 43.878 0.70687 43.878 43.441 44.148 0 196 46 7 0 0 0 3.0708E-05 1 20181 104.82 104.82 1 1.4778 1.2037 0 7438800 3205600 4233200 36860 1942 13922 14304 57774 57774 VEVPQPLSWYPEELAWHTNLSR 22 0 1 Unmodified _VEVPQPLSWYPEELAWHTNLSR_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.118 3 884.446605 2650.31799 67644.92 0.65521 0.0005795 0.40106 0.00035472 1.0563 0.00093422 884.7813317777 887.78245584771 122.6 0.51606 122.6 122.34 122.86 0 132 37 6 0 0 0 0.00040734 1 79423 34.009 34.009 1 1.0183 1.0147 0 8118900 3580800 4538100 36861 1694 13923 14305 57775 57775 VEVPQPLSWYPEELAWHTNLSR 22 0 1 Unmodified _VEVPQPLSWYPEELAWHTNLSR_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 884.7798 3 884.446605 2650.31799 66291.55 0.60713 0.00053697 -0.060632 -5.3626E-05 0.5465 0.00048335 884.780820492944 888.11684803314 121.82 0.65002 121.82 121.45 122.1 0 155 47 6 0 0 0 0.00011123 1 80802 36.253 36.253 1 1.2113 1.2045 0 7641800 2995600 4646200 36862 1694 13923 14305 57776 57776 VEVPQPLSWYPEELAWHTNLSR 22 0 1 Unmodified _VEVPQPLSWYPEELAWHTNLSR_ 0 0 0 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 884.7821 3 884.446605 2650.31799 65028.31 1.0023 0.00088647 -0.0070673 -6.2506E-06 0.99522 0.00088022 884.780490195011 888.116888877085 134.13 0.22456 134.13 134.02 134.25 0 62 10 10 0 0 0 0.0016549 1 81820 24.552 24.552 1 0.75743 0.63431 0 10196000 6007000 4189300 36863 1694 13923 14305 57777 57777 VEVQVLNIDIPR 12 0 1 Unmodified _VEVQVLNIDIPR_ 0 0 0 B3KPM8;Q8N5C6;B7ZAA7;B7Z6X7 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.4062 2 697.903734 1393.79291 80470.45 1.2106 0.00084489 0.49165 0.00034312 1.7023 0.001188 698.405318100099 702.908358268676 111.52 0.36645 111.52 111.4 111.77 0 49 25 4 0 0 0 0.00014324 3 70222 93.258 79.343 1 1.3872 1.4556 0 12026000 6142400 5883300 36864 921 13924 14306 57778;57779;57780 57779 VEVQVLNIDIPR 12 0 1 Unmodified _VEVQVLNIDIPR_ 0 0 0 B3KPM8;Q8N5C6;B7ZAA7;B7Z6X7 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.9044 2 697.903734 1393.79291 73472.16 0.85737 0.00059836 0.15268 0.00010656 1.0101 0.00070492 697.903826110522 702.908014550381 122.87 0.41019 122.87 122.61 123.02 0 75 19 6 0 0 0 0.00018807 2 73356 86.014 68.578 1 1.8505 1.5526 0 3139100 1573700 1565500 36865 921 13924 14306 57781;57782 57782 VEVQVLNIDIPR 12 0 1 Unmodified _VEVQVLNIDIPR_ 0 0 0 B3KPM8;Q8N5C6;B7ZAA7;B7Z6X7 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.9083 2 697.903734 1393.79291 75915.02 0.85863 0.00059924 -0.012755 -8.9016E-06 0.84587 0.00059034 698.405272404427 702.908010148094 122.66 0.41778 122.66 122.49 122.9 0 83 20 6 0 0 0 0.00022281 2 72271 88.596 71.16 1 1.6755 1.481 0 3767700 1352800 2414900 36866 921 13924 14306 57783;57784 57783 VEWSAFLEAADNLR 14 0 1 Unmodified _VEWSAFLEAADNLR_ 0 0 0 F5GX77;A0A024R565;Q9UI30;F5GYQ2 F5GX77 F5GX77 TRMT112;HSPC152 Multifunctional methyltransferase subunit TRM112-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.9059 2 810.904462 1619.79437 NaN NaN NaN 0.082451 6.686E-05 NaN NaN NaN NaN 124.49 0.42059 124.49 124.34 124.76 0 0 0 0 0.0012054 2 80814 89.403 74.431 1 NaN NaN 0 5601700 5601700 0 36867 170 13925 14307 57785;57786 57785 VEWSAFLEAADNLR 14 0 1 Unmodified _VEWSAFLEAADNLR_ 0 0 0 F5GX77;A0A024R565;Q9UI30;F5GYQ2 F5GX77 F5GX77 TRMT112;HSPC152 Multifunctional methyltransferase subunit TRM112-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.906 2 810.904462 1619.79437 NaN NaN NaN -0.035291 -2.8618E-05 NaN NaN NaN NaN 124.13 0.38978 124.13 123.93 124.32 -7.6294E-06 0 0 0 0.04503 1 82635 54.772 38.518 1 NaN NaN 0 4458300 4458300 0 36868 170 13925 14307 57787 57787 VEYPIMYSTDPENGHIFNCIQR 22 0 1 Oxidation (M) _VEYPIM(ox)YSTDPENGHIFNCIQR_ VEYPIM(1)YSTDPENGHIFNCIQR VEYPIM(45.88)YSTDPENGHIFNCIQR 0 1 0 Q53GB9;A0A024R8Z1;Q5VV89;O14880;Q5VV87 Q53GB9 Q53GB9 MGST3 Microsomal glutathione S-transferase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.0831 3 900.412467 2698.21557 65250.24 0.71006 0.00063934 -0.45094 -0.00040603 0.25912 0.00023331 900.74656350584 904.082589556495 94.862 0.58171 94.862 94.585 95.167 0 200 50 8 0 0 0 5.8326E-06 1 57636 45.88 43.535 1 2.2379 2.32 0 22830000 7247700 15582000 36869 265 13926 14308 57788 57788 204 VEYSEEELK 9 1 0 Unmodified _VEYSEEELK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.2693 2 563.269144 1124.52373 79564.94 0.58091 0.00032721 0.076873 4.33E-05 0.65778 0.00037051 563.269121873924 567.276112324604 37.738 0.94566 37.738 37.336 38.282 0 427 79 10 0 0 0 0.0011452 2 19084 89.355 89.355 1 0.39671 0.46474 0 292850000 206950000 85899000 36870 82 13927 14309 57789;57790 57789 VEYSEEELK 9 1 0 Unmodified _VEYSEEELK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.2695 2 563.269144 1124.52373 80215.5 0.52519 0.00029582 -0.053173 -2.9951E-05 0.47202 0.00026587 563.269091661683 567.276012291894 36.849 0.85601 36.849 36.525 37.381 0 324 66 9 0 0 0 1.1693E-06 2 18972 136.8 113.91 1 0.33653 0.39647 0 548480000 404260000 144230000 36871 82 13927 14309 57791;57792 57791 VEYSEEELK 9 1 0 Unmodified _VEYSEEELK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.2766 2 563.269144 1124.52373 79830.23 0.58462 0.0003293 -0.18221 -0.00010263 0.40241 0.00022667 563.269080362831 567.276041999152 43.629 1.3029 43.629 43.282 44.585 0 494 89 9 0 0 0 0.0018407 2 20542 80.165 74.857 1 0.31365 0.2622 0 50154000 38903000 11250000 36872 82 13927 14309 57793;57794 57794 VEYSEEELK 9 1 0 Unmodified _VEYSEEELK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356;Q6IC76 A0A024R1N4 A0A024R1N4 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.2695 2 563.269144 1124.52373 80604.91 0.52327 0.00029474 -0.19233 -0.00010833 0.33094 0.00018641 563.269043375826 567.276047935143 43.855 1.1946 43.855 43.546 44.741 3.8147E-06 379 79 9 0 0 0 0.016543 2 20073 53.775 53.775 1 0.28736 0.24046 0 45104000 35233000 9870100 36873 82 13927 14309 57795;57796 57795 VFAEYPGSSAQLR 13 0 1 Unmodified _VFAEYPGSSAQLR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.8668 2 712.862066 1423.70958 NaN NaN NaN -0.0050936 -3.631E-06 NaN NaN NaN NaN 68.163 0.88106 68.163 67.931 68.812 0 0 0 0 0.00096894 1 39561 78.488 68.256 1 NaN NaN 0 43164000 0 43164000 36874 897 13928 14310 57797 57797 VFAEYPGSSAQLR 13 0 1 Unmodified _VFAEYPGSSAQLR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.8669 2 712.862066 1423.70958 NaN NaN NaN 0.15175 0.00010818 NaN NaN NaN NaN 78.378 0.74077 78.378 78.02 78.761 0 0 0 0 0.0041168 1 42041 62.633 52.401 1 NaN NaN 0 12598000 0 12598000 36875 897 13928 14310 57798 57798 VFAEYPGSSAQLR 13 0 1 Unmodified _VFAEYPGSSAQLR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.8666 2 712.862066 1423.70958 72115.77 0.61991 0.00044191 -0.060417 -4.3069E-05 0.55949 0.00039884 712.862054207058 717.866277468341 78.687 0.81947 78.687 78.329 79.149 0 310 53 8 0 0 0 0.00015572 2 41375 72.652 59.696 1 1.6861 1.4343 0 19350000 7504700 11846000 36876 897 13928 14310 57799;57800 57799 VFANAPDSACVIGLK 15 1 0 Unmodified _VFANAPDSACVIGLK_ 0 0 0 P17858;Q7L2M7;Q9BSP4;B3KNQ7 P17858 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.4024 2 781.405783 1560.79701 69931.53 0.83372 0.00065148 -0.033377 -2.6081E-05 0.80034 0.00062539 781.40583382054 785.41310270913 90.204 0.63881 90.204 89.834 90.473 0 135 57 4 0 0 0 0.0026551 1 55658 44.299 44.299 1 0.9439 0.9544 0 13125000 6344500 6780300 36877 1495 13929 14311 57801 57801 VFANPEDCVAFGK 13 1 0 Unmodified _VFANPEDCVAFGK_ 0 0 0 Q6LET6;A0A024RAX2;P10620;F5H7F6;F5H6X2 Q6LET6 Q6LET6 MGST1 Microsomal glutathione S-transferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.3432 2 727.342652 1452.67075 72744.73 0.72308 0.00052593 0.39309 0.00028591 1.1162 0.00081184 727.342858218048 731.348320452347 79.907 0.57869 79.907 79.654 80.233 7.6294E-06 194 48 6 0 0 0 0.0030752 1 47464 51.162 39.997 1 1.1179 1.1246 0 18541000 9288600 9252600 36878 315 13930 14312 57802 57802 VFASELNAGIIK 12 1 0 Unmodified _VFASELNAGIIK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;Q9NVP8;Q9NVC0 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 631.3621 2 631.36117 1260.70779 82550.02 0.73987 0.00046712 0.0070859 4.4738E-06 0.74695 0.0004716 631.362115515436 635.368113106832 91.842 0.77168 91.842 91.463 92.234 7.6294E-06 189 67 4 0 0 0 0.00011876 1 55617 94.692 83.862 1 1.4862 1.5449 0 12446000 4390300 8055800 36879 883 13931 14313 57803 57803 VFASELNAGIIK 12 1 0 Unmodified _VFASELNAGIIK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;Q9NVP8;Q9NVC0 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3682 2 631.36117 1260.70779 75202.55 0.9633 0.00060819 0.19365 0.00012226 1.1569 0.00073045 631.362076546928 635.368217498347 90.688 0.74978 90.688 90.564 91.314 0 166 61 5 0 0 0 0.00023447 1 56425 87.913 66.465 1 1.8154 1.8608 0 25508000 8178900 17329000 36880 883 13931 14313 57804 57804 VFASELNAGIIK 12 1 0 Unmodified _VFASELNAGIIK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3;Q9NPU8;Q9HAM7;Q9NVP8;Q9NVC0 B4E266 B4E266 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3627 2 631.36117 1260.70779 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.121 1 91.121 90.621 91.621 0 0 0 0 0.00024919 1 56398 82.749 66.868 1 36881 883 13931 14313 57805 57805 VFCVEEEDSESSLQK 15 1 0 Unmodified _VFCVEEEDSESSLQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.3952 2 893.396006 1784.77746 67191.88 0.36449 0.00032563 -0.035115 -3.1372E-05 0.32937 0.00029426 893.395875113864 897.904462461112 62.685 0.55371 62.685 62.413 62.966 3.8147E-06 110 53 5 0 0 0 1.7077E-05 1 35916 87.667 79.257 1 1.0057 1.0308 0 14405000 9796500 4608400 36882 1740 13932 14314 57806 57806 VFCVEEEDSESSLQK 15 1 0 Unmodified _VFCVEEEDSESSLQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.3969 2 893.396006 1784.77746 65687.36 0.55262 0.00049371 0.25492 0.00022775 0.80754 0.00072145 893.897373162111 897.404089614322 61.707 0.50704 61.707 61.476 61.983 0 214 47 6 0 0 0 4.2164E-07 2 36120 104.07 95.66 1 0.87424 0.93931 0 21480000 9626600 11853000 36883 1740 13932 14314 57807;57808 57808 VFCVEEEDSESSLQK 15 1 0 Unmodified _VFCVEEEDSESSLQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 897.4045 2 893.396006 1784.77746 64475.84 0.39271 0.00035085 0.19846 0.0001773 0.59117 0.00052815 893.395946827843 897.403988988679 72.654 0.73352 72.654 72.383 73.117 0 303 52 8 0 0 0 0.0002205 2 38419 62.14 56.647 1 1.6061 1.2469 0 14561000 4920400 9640900 36884 1740 13932 14314 57809;57810 57810 VFCVEEEDSESSLQK 15 1 0 Unmodified _VFCVEEEDSESSLQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 893.3953 2 893.396006 1784.77746 64106.85 0.17525 0.00015657 0.19368 0.00017303 0.36893 0.0003296 893.395936358893 897.403923358307 73.237 0.70163 73.237 72.988 73.69 7.6294E-06 311 48 8 0 0 0 0.00029768 2 37851 60.49 54.456 1 1.6504 1.3426 0 13001000 4489000 8511900 36885 1740 13932 14314 57811;57812 57811 VFDAIMNFK 9 1 0 Oxidation (M) _VFDAIM(ox)NFK_ VFDAIM(1)NFK VFDAIM(72.48)NFK 0 1 0 P13639;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.7767 2 550.775885 1099.53722 80727.77 0.90009 0.00049575 -0.0042837 -2.3594E-06 0.89581 0.00049339 550.775907358684 554.782954593449 80.89 0.75673 80.89 80.506 81.263 0 295 64 7 0 0 0 0.0015341 2 48035 72.485 65.005 1 4.9577 5.5962 0 79741000 12789000 66952000 36886 1478 13933 14315 57813;57814 57814 1234 VFDAIMNFK 9 1 0 Oxidation (M) _VFDAIM(ox)NFK_ VFDAIM(1)NFK VFDAIM(63.48)NFK 0 1 0 P13639;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.7835 2 550.775885 1099.53722 82581.39 0.7148 0.00039369 0.17522 9.651E-05 0.89002 0.0004902 550.776077770586 554.783002524208 79.79 0.64045 79.79 79.477 80.118 0 232 49 6 0 0 0 0.0032548 2 48609 63.48 54.266 1 5.3787 6.0319 0 54925000 10298000 44627000 36887 1478 13933 14315 57815;57816 57816 1234 VFDAIMNFK 9 1 0 Oxidation (M) _VFDAIM(ox)NFK_ VFDAIM(1)NFK VFDAIM(43.77)NFK 0 1 0 P13639;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.7831 2 550.775885 1099.53722 83715.3 0.39709 0.00021871 0.15651 8.6202E-05 0.5536 0.00030491 550.776062615932 554.782990277681 91.983 0.58908 91.983 91.667 92.256 -7.6294E-06 90 32 4 0 0 0 0.017279 1 50372 43.769 35.549 1 1.3288 1.1763 0 835130 391500 443630 36888 1478 13933 14315 57817 57817 1234 VFDFLVDSINK 11 1 0 Unmodified _VFDFLVDSINK_ 0 0 0 Q4KMR3;Q12965;H0YLE5 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.8534 2 648.845353 1295.67615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.88 1 115.88 115.38 116.38 0 0 0 0 3.3821E-05 1 73864 86.898 57.425 1 36889 1703 13934 14316 57818 57818 VFDFLVDSINK 11 1 0 Unmodified _VFDFLVDSINK_ 0 0 0 Q4KMR3;Q12965;H0YLE5 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.8538 2 648.845353 1295.67615 75562.84 0.95881 0.00062212 -0.35881 -0.00023282 0.6 0.0003893 649.346542477398 652.852057368499 115.42 0.69325 115.42 115.07 115.76 0 251 45 9 0 0 0 2.3128E-05 1 75166 103.7 75.958 1 0.69085 0.75803 0 41283000 24147000 17136000 36890 1703 13934 14316 57819 57819 VFDFLVDSINK 11 1 0 Unmodified _VFDFLVDSINK_ 0 0 0 Q4KMR3;Q12965;H0YLE5 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.8457 2 648.845353 1295.67615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.33 1 115.33 114.83 115.83 0 0 0 0 0.013302 1 75227 56.548 33.228 1 36891 1703 13934 14316 57820 57820 VFDFLVDSINK 11 1 0 Unmodified _VFDFLVDSINK_ 0 0 0 Q4KMR3;Q12965;H0YLE5 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.3571 2 648.845353 1295.67615 75792.16 0.71555 0.00046428 -0.31156 -0.00020216 0.40399 0.00026213 648.845022534914 652.85198380817 127.13 0.65374 127.13 126.86 127.51 0 107 28 5 0 0 0 0.0033031 1 76468 60.064 43.393 1 1.4817 1.154 0 3732200 1384000 2348300 36892 1703 13934 14316 57821 57821 VFDFLVDSINK 11 1 0 Unmodified _VFDFLVDSINK_ 0 0 0 Q4KMR3;Q12965;H0YLE5 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.8535 2 648.845353 1295.67615 76168.91 0.66786 0.00043334 -0.23664 -0.00015354 0.43122 0.00027979 649.346983824683 652.85215784518 126.98 0.991 126.98 126.51 127.5 7.6294E-06 158 42 8 0 0 0 0.025726 1 75433 41.08 22.768 1 1.4104 1.1286 0 4156100 1704200 2451900 36893 1703 13934 14316 57822 57822 VFDGIPPPYDK 11 1 0 Unmodified _VFDGIPPPYDK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.3275 2 624.318971 1246.62339 77187.05 0.63175 0.00039441 0.050218 3.1352E-05 0.68197 0.00042577 624.318862666862 628.326028229154 79.074 1.8692 79.074 78.492 80.361 0 1019 165 9 0 0 0 0.0003695 4 46616 83.869 83.869 1 0.86316 1.0247 0 525950000 267180000 258780000 36894 1558 13935 14317 57823;57824;57825;57826 57823 VFDGIPPPYDK 11 1 0 Unmodified _VFDGIPPPYDK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3271 2 624.318971 1246.62339 76768.27 0.42813 0.00026729 0.34396 0.00021474 0.77208 0.00048203 624.319125970196 628.326147243813 78.105 1.6575 78.105 77.565 79.223 0 944 143 9 0 0 0 0.00036959 4 47593 83.862 83.862 1 0.86233 1.0148 0 391480000 211180000 180300000 36895 1558 13935 14317 57827;57828;57829;57830 57830 VFDGIPPPYDK 11 1 0 Unmodified _VFDGIPPPYDK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.3267 2 624.318971 1246.62339 76016.05 0.53283 0.00033265 0.23132 0.00014442 0.76415 0.00047707 624.318992753699 628.326122749237 90.242 1.8939 90.242 89.687 91.581 0 701 125 10 0 0 0 0.0020022 3 50288 63.184 58.572 1 0.92148 0.75295 0 33834000 17947000 15887000 36896 1558 13935 14317 57831;57832;57833 57833 VFDGIPPPYDK 11 1 0 Unmodified _VFDGIPPPYDK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q0VGL3;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.3191 2 624.318971 1246.62339 76655.07 0.40001 0.00024973 0.12787 7.9831E-05 0.52788 0.00032956 624.318992363724 628.326051937905 90.216 1.6536 90.216 89.575 91.229 0 639 104 10 0 0 0 0.0024553 4 49397 61.593 61.593 1 0.91375 0.75577 0 32764000 16881000 15883000 36897 1558 13935 14317 57834;57835;57836;57837 57837 VFDLLNRK 8 1 1 Unmodified _VFDLLNRK_ 0 0 1 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 335.5343 3 335.534431 1003.58147 NaN NaN NaN 0.35796 0.00012011 NaN NaN NaN NaN 59.902 0.29911 59.902 59.723 60.022 -3.8147E-06 0 0 0 0.033771 1 34154 35.295 19.414 1 NaN NaN 0 7826600 7826600 0 36898 804 13936 14318 57838 57838 VFDLLNRK 8 1 1 Unmodified _VFDLLNRK_ 0 0 1 B0AZS5;O00139;B4DM85 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 335.5342 3 335.534431 1003.58147 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.336 1 58.336 57.836 58.836 0 0 0 0 0.045512 1 33898 42.109 11.942 1 36899 804 13936 14318 57839 57839 VFDLQFSTDSPR 12 0 1 Unmodified _VFDLQFSTDSPR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.3466 2 706.346249 1410.67794 71804.06 0.75966 0.00053658 0.53036 0.00037461 1.29 0.0009112 706.346212922066 711.350853724909 94.973 0.98395 94.973 94.468 95.452 0 386 75 8 0 0 0 7.1571E-05 2 57557 97.456 97.456 1 1.3794 1.5362 0 80596000 31471000 49125000 36900 740 13937 14319 57840;57841 57840 VFDLQFSTDSPR 12 0 1 Unmodified _VFDLQFSTDSPR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 706.8481 2 706.346249 1410.67794 72235.92 0.91074 0.0006433 0.43206 0.00030518 1.3428 0.00094848 706.346137946547 711.351016104139 94.111 1.2023 94.111 93.655 94.857 0 430 93 8 0 0 0 0.00029759 2 58321 73.067 73.067 1 1.4712 1.6727 0 121090000 35622000 85470000 36901 740 13937 14319 57842;57843 57842 VFDLQFSTDSPR 12 0 1 Unmodified _VFDLQFSTDSPR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 711.351 2 706.346249 1410.67794 72095.45 0.83588 0.00059042 0.2283 0.00016126 1.0642 0.00075168 706.346397097764 711.350605825326 107.92 0.99503 107.92 107.56 108.56 0 266 49 8 0 0 0 1.3083E-05 3 62030 106.62 96.095 1 1.8853 1.577 0 24357000 8116900 16241000 36902 740 13937 14319 57844;57845;57846 57846 VFDLQFSTDSPR 12 0 1 Unmodified _VFDLQFSTDSPR_ 0 0 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.3505 2 706.346249 1410.67794 71406.77 0.61451 0.00043406 0.34474 0.0002435 0.95925 0.00067756 706.346178647864 711.350817101522 107.81 1.1581 107.81 107.47 108.62 7.6294E-06 283 60 8 0 0 0 0.00014601 2 61061 93.096 88.644 1 1.9389 1.6724 0 22487000 7315500 15172000 36903 740 13937 14319 57847;57848 57848 VFDMLNR 7 0 1 Oxidation (M) _VFDM(ox)LNR_ VFDM(1)LNR VFDM(50.97)LNR 0 1 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;Q9NZE6;B4DJX6 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.7304 2 455.726195 909.437837 90878.16 0.26557 0.00012103 -0.22861 -0.00010419 0.036957 1.6842E-05 455.726274005743 460.730248939403 40.382 0.70229 40.382 40.024 40.727 3.8147E-06 180 61 5 0 0 0 0.028551 1 21089 50.966 26.994 1 3.1622 3.5004 0 61538000 17462000 44076000 36904 770 13938 14320 57849 57849 602 VFDMLNR 7 0 1 Oxidation (M) _VFDM(ox)LNR_ VFDM(1)LNR VFDM(92.19)LNR 0 1 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3KSZ0;E7EQG2;Q14240;J3QLN6;J3QKZ9;B4E047;J3KS25;Q9NZE6;B4DJX6 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.7304 2 455.726195 909.437837 NaN NaN NaN 0.039295 1.7908E-05 NaN NaN NaN NaN 38.653 0.71815 38.653 38.408 39.126 0 0 0 0 0.0081607 1 20293 92.191 34.738 1 NaN NaN 0 40426000 0 40426000 36905 770 13938 14320 57850 57850 602 VFDPVPVGVTK 11 1 0 Unmodified _VFDPVPVGVTK_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.3327 2 579.331882 1156.64921 79252.44 0.55514 0.00032161 0.55375 0.00032081 1.1089 0.00064242 579.332239428585 583.33920219114 85.803 1.2488 85.803 85.286 86.535 0 343 101 5 0 0 0 0.00036932 2 51426 83.883 66.497 1 1.3347 1.5073 0 138860000 72781000 66081000 36906 1691 13939 14321 57851;57852 57851 VFDPVPVGVTK 11 1 0 Unmodified _VFDPVPVGVTK_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.3394 2 579.331882 1156.64921 79184.13 0.70815 0.00041026 -0.10152 -5.8813E-05 0.60663 0.00035144 579.332039333448 583.339007345355 84.794 1.143 84.794 84.148 85.292 0 568 95 8 0 0 0 0.00093586 2 52045 71.349 62.404 1 1.3459 1.5775 0 321480000 132740000 188740000 36907 1691 13939 14321 57853;57854 57854 VFDPVPVGVTK 11 1 0 Unmodified _VFDPVPVGVTK_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.3325 2 579.331882 1156.64921 79467.05 0.54578 0.00031619 0.20112 0.00011651 0.7469 0.0004327 579.332324109087 583.33925324099 98.024 1.243 98.024 97.367 98.61 0 420 78 8 0 0 0 0.01938 2 55128 44.318 43.77 1 1.62 1.3018 0 21605000 8054900 13550000 36908 1691 13939 14321 57855;57856 57855 VFDPVPVGVTK 11 1 0 Unmodified _VFDPVPVGVTK_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.3329 2 579.331882 1156.64921 79276.84 0.42537 0.00024643 0.74365 0.00043082 1.169 0.00067725 579.332505490121 583.339463582177 97.778 1.1624 97.778 97.265 98.427 0 346 67 8 0 0 0 0.006888 2 54197 53.597 38.928 1 1.5519 1.2445 0 19080000 7015200 12065000 36909 1691 13939 14321 57857;57858 57858 VFEEDALSWEDK 12 1 0 Unmodified _VFEEDALSWEDK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3448 2 734.335546 1466.65654 NaN NaN NaN 0.18754 0.00013772 NaN NaN NaN NaN 88.832 0.4193 88.832 88.571 88.99 0 0 0 0 0.00065451 1 53515 86.624 78.043 1 NaN NaN 0 3241500 0 3241500 36910 1729 13940 14322 57859 57859 VFELDLVTLR 10 0 1 Unmodified _VFELDLVTLR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.851 2 602.850438 1203.68632 80311.69 0.97067 0.00058517 0.59597 0.00035928 1.5666 0.00094445 602.850358272701 607.855338011643 119.43 0.48584 119.43 119.22 119.71 0 154 32 7 0 0 0 4.6591E-08 2 76750 116.52 86.446 1 0.96659 1.0102 0 10675000 5995700 4679100 36911 1581 13941 14323 57860;57861 57861 VFELDLVTLR 10 0 1 Unmodified _VFELDLVTLR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.8509 2 602.850438 1203.68632 79245.72 0.62243 0.00037523 0.72006 0.00043409 1.3425 0.00080932 602.850522344197 607.855536035577 118.9 0.47192 118.9 118.68 119.15 0 117 29 5 0 0 0 0.00013082 2 78178 96.331 69.947 1 1.0066 0.99741 0 12153000 5966000 6187100 36912 1581 13941 14323 57862;57863 57863 VFELDLVTLR 10 0 1 Unmodified _VFELDLVTLR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8517 2 602.850438 1203.68632 79269.72 0.62178 0.00037484 0.30956 0.00018662 0.93134 0.00056146 602.850061169719 607.8548506411 131.56 0.46817 131.56 131.34 131.81 0 70 21 5 0 0 0 0.010146 1 79938 53.751 46.691 1 1.4956 1.2984 0 2190300 947920 1242400 36913 1581 13941 14323 57864 57864 VFELDLVTLR 10 0 1 Unmodified _VFELDLVTLR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.8552 2 602.850438 1203.68632 80834.03 0.88335 0.00053253 0.10993 6.6273E-05 0.99329 0.0005988 602.850580026206 607.854378132431 131.31 0.46754 131.31 131.1 131.56 0 78 20 6 0 0 0 0.0015966 2 78735 72.928 58.925 1 1.6074 1.4379 0 1977300 658350 1319000 36914 1581 13941 14323 57865;57866 57865 VFEVNASNLEK 11 1 0 Unmodified _VFEVNASNLEK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q6NVI4;Q0VGM8;Q9P0T1;A0A087WXY1 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.3318 2 625.324785 1248.63502 NaN NaN NaN 0.023589 1.4751E-05 NaN NaN NaN NaN 78.789 0.48813 78.789 78.553 79.041 0 0 0 0 0.013486 1 42369 55.064 50.123 1 NaN NaN 0 1692800 0 1692800 36915 883 13942 14324 57867 57867 VFEVNASNLEK 11 1 0 Unmodified _VFEVNASNLEK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q6NVI4;Q0VGM8;Q9P0T1;A0A087WXY1 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.3263 2 625.324785 1248.63502 77575.22 0.51344 0.00032106 0.54886 0.00034322 1.0623 0.00066428 625.325846987568 629.331582103183 79.027 0.50341 79.027 78.788 79.291 0 126 30 6 0 0 0 0.0058544 2 41709 55.461 49.426 1 1.0694 0.8496 0 3122500 1468900 1653600 36916 883 13942 14324 57868;57869 57869 VFEVSLADLQNDEVAFR 17 0 1 Unmodified _VFEVSLADLQNDEVAFR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RI02;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.9977 2 976.49163 1950.96871 61164.29 0.60397 0.00058977 -0.075139 -7.3372E-05 0.52883 0.0005164 976.992939300484 981.495829825789 121.88 1.2307 121.88 121.59 122.82 7.6294E-06 538 85 12 0 0 0 3.9598E-18 5 78681 132.14 132.14 1 0.91583 1.0852 0 482010000 247360000 234660000 36917 742 13943 14325 57870;57871;57872;57873;57874 57870 VFEVSLADLQNDEVAFR 17 0 1 Unmodified _VFEVSLADLQNDEVAFR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RI02;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.4984 2 976.49163 1950.96871 NaN NaN NaN 0.73106 0.00071387 NaN NaN NaN NaN 122.84 0.57806 122.84 122.58 123.16 -7.6294E-06 0 0 0 3.854E-13 3 79433 112.51 99.103 1 NaN NaN 0 3408300 0 3408300 36918 742 13943 14325 57875;57876;57877 57875 VFEVSLADLQNDEVAFR 17 0 1 Unmodified _VFEVSLADLQNDEVAFR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RI02;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.4984 2 976.49163 1950.96871 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.56 1 132.56 132.06 133.06 0 0 0 0 0.0061012 1 86619 49.423 36.019 1 36919 742 13943 14325 57878 57878 VFEVSLADLQNDEVAFR 17 0 1 Unmodified _VFEVSLADLQNDEVAFR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RI02;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.4964 2 976.49163 1950.96871 61578.16 0.63217 0.0006173 -0.038635 -3.7727E-05 0.59353 0.00057958 976.992948200229 981.495873738021 121.46 1.325 121.46 121.09 122.41 7.6294E-06 626 92 12 0 0 0 4.489E-57 3 80273 177.83 177.83 1 0.92198 1.0729 0 413250000 213490000 199760000 36920 742 13943 14325 57879;57880;57881 57879 VFEVSLADLQNDEVAFR 17 0 1 Unmodified _VFEVSLADLQNDEVAFR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RI02;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 981.9986 2 976.49163 1950.96871 61111.63 0.69672 0.00068034 0.052815 5.1574E-05 0.74954 0.00073192 976.992766051712 981.496005260426 134.24 0.51198 134.24 134.04 134.56 0 146 23 12 0 0 0 3.6122E-34 2 81856 154.36 154.36 1 0.8621 0.74717 0 165440000 89430000 76006000 36921 742 13943 14325 57882;57883 57882 VFEVSLADLQNDEVAFR 17 0 1 Unmodified _VFEVSLADLQNDEVAFR_ 0 0 0 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RI02;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 976.4918 2 976.49163 1950.96871 61585.13 0.75983 0.00074197 -0.33095 -0.00032317 0.42888 0.0004188 976.992348767132 981.495624226438 134.11 0.54987 134.11 133.92 134.47 0 184 27 11 0 0 0 4.0078E-95 2 80851 216.68 216.68 1 0.89248 0.77937 0 157390000 83912000 73480000 36922 742 13943 14325 57884;57885 57885 VFEVSLADLQNDEVAFRK 18 1 1 Unmodified _VFEVSLADLQNDEVAFRK_ 0 0 1 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RI02;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.0293 3 694.0285 2079.06367 75947.09 1.0003 0.00069421 -0.12062 -8.3716E-05 0.87964 0.00061049 694.02866920276 700.369287520109 110.88 0.49271 110.88 110.61 111.1 0 129 31 7 0 0 0 1.159E-06 3 69678 84.035 84.035 1 1.0797 1.1612 0 14019000 7576200 6443000 36923 742 13944 14326 57886;57887;57888 57887 VFEVSLADLQNDEVAFRK 18 1 1 Unmodified _VFEVSLADLQNDEVAFRK_ 0 0 1 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RI02;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.3713 3 694.0285 2079.06367 76870.99 0.74719 0.00051857 -0.44826 -0.00031111 0.29893 0.00020746 694.028764245644 700.03490422008 110.16 0.38976 110.16 109.98 110.37 0 113 23 6 0 0 0 1.159E-06 1 70834 84.035 84.035 1 1.1961 1.3584 0 17930000 7422800 10507000 36924 742 13944 14326 57889 57889 VFEVSLADLQNDEVAFRK 18 1 1 Unmodified _VFEVSLADLQNDEVAFRK_ 0 0 1 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RI02;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.0289 3 694.0285 2079.06367 72603.34 0.736 0.00051081 -0.42367 -0.00029404 0.31233 0.00021677 694.362690528333 700.03553201568 121.73 0.77071 121.73 121.56 122.33 -7.6294E-06 201 38 10 0 0 0 4.9773E-17 2 72459 117.26 117.26 1 0.96104 0.84494 0 33306000 17319000 15988000 36925 742 13944 14326 57890;57891 57891 VFEVSLADLQNDEVAFRK 18 1 1 Unmodified _VFEVSLADLQNDEVAFRK_ 0 0 1 Q6NXR8;A8K4W0;P61247;D6RG13;B7Z3M5;H0Y8L7;E9PFI5;D6RAT0;D6RB09;D6RAS7;D6RED7;D6RI02;D6RGE0 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.0281 3 694.0285 2079.06367 72776.73 0.76325 0.00052972 -0.37511 -0.00026034 0.38814 0.00026938 694.362693926992 700.369661628192 121.53 0.82959 121.53 121.33 122.16 -7.6294E-06 219 42 10 0 0 0 1.6267E-12 2 71371 107.75 107.75 1 0.95331 0.81138 0 38496000 20144000 18351000 36926 742 13944 14326 57892;57893 57892 VFFTCNACGESVK 13 1 0 Unmodified _VFFTCNACGESVK_ 0 0 0 Q9NX58;A8K3Y5;D6RDJ1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.8478 2 759.839419 1517.66428 71523.84 0.63422 0.00048191 -0.43815 -0.00033292 0.19607 0.00014898 759.839614937463 763.847141765231 64.15 0.82941 64.15 63.703 64.533 0 313 74 6 0 0 0 0.00012623 4 36824 84.658 81.865 1 0.68886 0.67508 0 21187000 13585000 7601500 36927 2079 13945 14327 57894;57895;57896;57897 57897 VFFTCNACGESVK 13 1 0 Unmodified _VFFTCNACGESVK_ 0 0 0 Q9NX58;A8K3Y5;D6RDJ1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 763.8477 2 759.839419 1517.66428 70237.64 0.40871 0.00031055 -0.46346 -0.00035215 -0.054747 -4.1599E-05 759.839615767985 763.847126055575 62.872 0.77796 62.872 62.599 63.377 0 337 67 7 0 0 0 0.00034597 2 36817 63.408 61.254 1 0.62634 0.63735 0 30473000 19184000 11289000 36928 2079 13945 14327 57898;57899 57899 VFFTCNACGESVK 13 1 0 Unmodified _VFFTCNACGESVK_ 0 0 0 Q9NX58;A8K3Y5;D6RDJ1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.3494 2 759.839419 1517.66428 70499.13 0.67205 0.00051065 -0.63787 -0.00048468 0.034181 2.5972E-05 759.839495505261 763.846655800712 73.755 0.89217 73.755 73.407 74.299 0 414 64 9 0 0 0 0.00013105 2 38935 79.693 79.003 1 1.1601 0.93147 0 21412000 9712600 11700000 36929 2079 13945 14327 57900;57901 57900 VFFTCNACGESVK 13 1 0 Unmodified _VFFTCNACGESVK_ 0 0 0 Q9NX58;A8K3Y5;D6RDJ1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 763.8474 2 759.839419 1517.66428 69884.61 0.60007 0.00045596 -0.90321 -0.0006863 -0.30314 -0.00023034 759.839413635154 763.846368162368 74.21 0.95847 74.21 73.881 74.84 0 411 63 10 0 0 0 5.3239E-06 2 38437 105.98 103 1 1.0888 0.87221 0 21726000 10278000 11448000 36930 2079 13945 14327 57902;57903 57902 VFGAAPLENVVR 12 0 1 Unmodified _VFGAAPLENVVR_ 0 0 0 C9JP85;A0A024R770;A0A024R774;Q16656 C9JP85 C9JP85 NRF1 Nuclear respiratory factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.3654 2 636.358962 1270.70337 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.888 1 92.888 92.388 93.388 0 0 0 0 0.0056194 1 57606 63.283 42.413 1 36931 216 13946 14328 57904 57904 VFGAPEVLENLEVK 14 1 0 Unmodified _VFGAPEVLENLEVK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 776.4303 2 772.421956 1542.82936 68543.92 0.86237 0.00066611 0.58091 0.00044871 1.4433 0.0011148 772.923487853568 776.429264909567 115.44 0.4698 115.44 115.24 115.71 -7.6294E-06 155 29 7 0 0 0 5.7533E-05 2 75305 91.937 84.675 1 0.69872 0.71146 0 30650000 19169000 11481000 36932 1937 13947 14329 57905;57906 57906 VFGAPEVLENLEVK 14 1 0 Unmodified _VFGAPEVLENLEVK_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.4293 2 772.421956 1542.82936 71614.52 0.87822 0.00067836 0.2042 0.00015773 1.0824 0.00083609 772.421301229894 776.429108150392 127.62 0.4666 127.62 127.4 127.87 0 65 18 5 0 0 0 0.0002483 1 76089 62.466 62.466 1 0.92152 0.73894 0 3043500 1843300 1200100 36933 1937 13947 14329 57907 57907 VFGNEIK 7 1 0 Unmodified _VFGNEIK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 407.7318 2 403.723978 805.433404 93048.52 0.30805 0.00012437 0.31294 0.00012634 0.62099 0.00025071 403.723976551151 407.731167543413 34.529 0.7996 34.529 34.2 34.999 0 241 63 6 0 0 0 0.03754 1 17444 60.799 6.0123 1 0.97806 1.1213 0 166030000 79792000 86236000 36934 151 13948 14330 57908 57908 VFHLPTTTFIGGQESALPLR 20 0 1 Unmodified _VFHLPTTTFIGGQESALPLR_ 0 0 0 B4DF00;E9PDF2;E9PCR7;Q02218;B4DH65;A0A0D9SFS3;C9J4G7;A0A140VJQ5;A2VCT2;A2VCT3 B4DF00 B4DF00 OGDH 2-oxoglutarate dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.4026 3 728.731906 2183.17389 73369.55 0.77205 0.00056262 -0.09688 -7.06E-05 0.67517 0.00049202 729.065758275822 732.068788864041 115.3 0.61091 115.3 115.03 115.64 0 110 39 5 0 0 0 1.7771E-05 1 75315 46.494 46.494 1 1.0518 1.0554 0 9198000 5900400 3297600 36935 968 13949 14331 57909 57909 VFHLPTTTFIGGQESALPLR 20 0 1 Unmodified _VFHLPTTTFIGGQESALPLR_ 0 0 0 B4DF00;E9PDF2;E9PCR7;Q02218;B4DH65;A0A0D9SFS3;C9J4G7;A0A140VJQ5;A2VCT2;A2VCT3 B4DF00 B4DF00 OGDH 2-oxoglutarate dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.0667 3 728.731906 2183.17389 71526.73 0.8184 0.00059639 0.12573 9.1624E-05 0.94413 0.00068802 729.06642767424 732.068119272186 126.79 0.40261 126.79 126.6 127 0 86 16 7 0 0 0 0.0014753 1 76352 29.172 29.172 1 0.7317 0.61524 0 3092600 1936400 1156200 36936 968 13949 14331 57910 57910 VFHLPTTTFIGGQESALPLR 20 0 1 Unmodified _VFHLPTTTFIGGQESALPLR_ 0 0 0 B4DF00;E9PDF2;E9PCR7;Q02218;B4DH65;A0A0D9SFS3;C9J4G7;A0A140VJQ5;A2VCT2;A2VCT3 B4DF00 B4DF00 OGDH 2-oxoglutarate dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.0667 3 728.731906 2183.17389 73258.13 0.65567 0.00047781 0.22657 0.00016511 0.88224 0.00064291 729.06611751972 732.068621431387 126.64 0.38756 126.64 126.42 126.81 7.6294E-06 71 15 7 0 0 0 0.027581 1 75370 17.148 17.148 1 0.68688 0.60709 0 3740900 2139400 1601500 36937 968 13949 14331 57911 57911 VFIGNLNTALVK 12 1 0 Unmodified _VFIGNLNTALVK_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPM2;B4DSJ1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8854 2 644.884813 1287.75507 76370.23 1.0858 0.00070018 0.035885 2.3142E-05 1.1216 0.00072333 644.884779291893 648.89186689638 102.08 0.83131 102.08 101.55 102.38 0 401 65 8 0 0 0 1.174E-05 2 62553 107.24 0 1 0.89392 1.0077 0 75992000 41901000 34092000 36938 741 13950 14332 57912;57913 57913 VFIGNLNTALVK 12 1 0 Unmodified _VFIGNLNTALVK_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPM2;B4DSJ1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.8851 2 644.884813 1287.75507 76644.75 0.75543 0.00048717 0.18095 0.00011669 0.93638 0.00060386 644.884881403767 648.891917543825 101.14 0.84604 101.14 100.76 101.61 0 405 66 8 0 0 0 2.6269E-05 2 63479 100.48 0 1 0.9291 1.0477 0 125620000 64428000 61196000 36939 741 13950 14332 57914;57915 57915 VFIGNLNTALVK 12 1 0 Unmodified _VFIGNLNTALVK_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPM2;B4DSJ1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.8845 2 644.884813 1287.75507 76491.63 1.0289 0.00066355 -0.14131 -9.1127E-05 0.88764 0.00057242 644.884658756637 648.891643669305 114.27 0.7063 114.27 114.02 114.73 0 150 30 8 0 0 0 0.00013815 2 66653 93.556 0 1 0.56538 0.44961 0 19349000 12653000 6695900 36940 741 13950 14332 57916;57917 57917 VFIGNLNTALVK 12 1 0 Unmodified _VFIGNLNTALVK_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPM2;B4DSJ1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.8853 2 644.884813 1287.75507 75718.05 0.7208 0.00046483 0.06744 4.3491E-05 0.78824 0.00050832 644.884803209282 648.891838361687 114.04 0.78468 114.04 113.81 114.6 0 139 33 8 0 0 0 0.0012733 1 65579 61.56 0 1 0.60114 0.48312 0 16825000 10806000 6019300 36941 741 13950 14332 57918 57918 VFIGNLNTLVVK 12 1 0 Unmodified _VFIGNLNTLVVK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.9078 2 658.900463 1315.78637 74386.79 0.83148 0.00054786 -0.33006 -0.00021748 0.50141 0.00033038 658.9009622693 662.907576806524 110.07 1.1474 110.07 109.73 110.88 0 443 80 10 0 0 0 0.00088952 1 69225 64.297 64.297 1 1.0769 1.2881 0 851090000 393290000 457800000 36942 837;781 13951 14333 57919 57919 VFIGNLNTLVVK 12 1 0 Unmodified _VFIGNLNTLVVK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.9073 2 658.900463 1315.78637 74901.48 0.6434 0.00042393 -0.42522 -0.00028018 0.21818 0.00014376 658.900790573962 662.907395616166 109.41 1.1752 109.41 109.09 110.27 0 421 76 9 0 0 0 0.00022453 1 70263 88.495 88.495 1 1.1044 1.3016 0 613830000 288020000 325800000 36943 837;781 13951 14333 57920 57920 VFIGNLNTLVVK 12 1 0 Unmodified _VFIGNLNTLVVK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.9086 2 658.900463 1315.78637 NaN NaN NaN -0.44589 -0.0002938 NaN NaN NaN NaN 110.31 0.30347 110.31 110.27 110.57 0 0 0 0 0.048295 1 70978 42.001 27.703 1 NaN NaN 0 2592100 0 2592100 36944 837;781 13951 14333 57921 57921 VFIGNLNTLVVK 12 1 0 Unmodified _VFIGNLNTLVVK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.9012 2 658.900463 1315.78637 74018.4 0.90024 0.00059317 -0.26888 -0.00017716 0.63136 0.000416 658.900724096927 662.906645449981 121.34 1.2464 121.34 121.07 122.31 0 256 60 7 0 0 0 0.0018453 2 72066 60.102 60.102 1 0.60652 0.52573 0 125180000 77618000 47560000 36945 837;781 13951 14333 57922;57923 57922 VFIGNLNTLVVK 12 1 0 Unmodified _VFIGNLNTLVVK_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;B4DMJ1;B4DSU6;G3V4M8;G3V2H6;Q569J8;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V5X6;G3V3K6;G3V251 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.9084 2 658.900463 1315.78637 74746.97 0.78147 0.00051491 -0.089486 -5.8962E-05 0.69199 0.00045595 658.900836885037 662.906925694467 121.05 1.1607 121.05 120.83 121.99 -7.6294E-06 254 57 8 0 0 0 0.00013815 2 71004 93.556 93.556 1 0.6151 0.52652 0 119940000 71930000 48013000 36946 837;781 13951 14333 57924;57925 57925 VFLALAAK 8 1 0 Unmodified _VFLALAAK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 420.7756 2 416.768189 831.521825 95925.67 0.34442 0.00014354 0.040933 1.706E-05 0.38535 0.0001606 416.768178206597 420.775176718585 80.107 0.92097 80.107 79.654 80.575 0 263 77 5 0 0 0 0.02092 2 47440 58.167 41.612 1 0.68852 0.72863 0 31209000 18519000 12690000 36947 1665 13952 14334 57926;57927 57926 VFLDFFTYAPPK 12 1 0 Unmodified _VFLDFFTYAPPK_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.8798 2 722.879196 1443.74384 72216.11 0.93112 0.00067309 0.11731 8.4804E-05 1.0484 0.00075789 722.879236618162 726.886289126497 124.74 0.78539 124.74 124.44 125.23 7.6294E-06 263 53 7 0 0 0 0.00022453 1 80941 88.495 77.744 1 0.75936 0.77225 0 18033000 9915200 8117800 36948 1761 13953 14335 57928 57928 VFLDFFTYAPPK 12 1 0 Unmodified _VFLDFFTYAPPK_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.8802 2 722.879196 1443.74384 72559.13 0.99705 0.00072075 0.17631 0.00012745 1.1734 0.0008482 722.879310175351 726.886359955003 124.27 0.63673 124.27 124.03 124.67 0 184 40 6 0 0 0 2.6269E-05 2 82553 100.48 90.472 1 0.80259 0.82337 0 25433000 13423000 12010000 36949 1761 13953 14335 57929;57930 57929 VFLDVLMK 8 1 0 Oxidation (M) _VFLDVLM(ox)K_ VFLDVLM(1)K VFLDVLM(65.04)K 0 1 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.7773 2 490.777896 979.54124 NaN NaN NaN -0.22523 -0.00011054 NaN NaN NaN NaN 94.013 0.73404 94.013 93.666 94.4 0 0 0 0 0.0064077 2 58247 65.038 52.079 1 NaN NaN 0 9560300 9560300 0 36950 1740 13954 14336 57931;57932 57932 1578 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2922 2 495.292559 988.570566 86900.86 0.47545 0.00023549 -0.20612 -0.00010209 0.26933 0.0001334 495.292421911312 500.296466303352 82.357 0.81761 82.357 81.899 82.717 0 357 69 7 0 0 0 0.0018287 2 48995 105.39 59.673 1 0.71664 0.79934 0 84567000 52180000 32387000 36951 828 13955 14337 57933;57934 57933 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2926 2 495.292559 988.570566 86273.97 0.38483 0.0001906 0.12221 6.0528E-05 0.50703 0.00025113 495.292594611766 500.296700583119 98.346 3.0041 98.346 97.014 100.02 0 824 252 5 0 0 0 1.0833E-08 7 60616 152.31 98.76 1 0.68626 0.79933 0 188750000 107560000 81185000 36952 828 13955 14337 57935;57936;57937;57938;57939;57940;57941 57939 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2927 2 495.292559 988.570566 86269.79 0.47709 0.0002363 0.17765 8.7991E-05 0.65475 0.00032429 495.292562198498 500.296628100515 100.67 0.99727 100.67 100.04 101.04 7.6294E-06 251 78 5 0 0 0 0.0041914 2 61691 94.407 48.689 1 0.67934 0.77207 0 111290000 59697000 51591000 36953 828 13955 14337 57942;57943 57943 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 86269.78 0.43614 0.00021602 0.069367 3.4357E-05 0.50551 0.00025037 495.292537231081 500.29658187935 101 0.8895 101 100.87 101.76 0 298 68 5 0 0 0 0.0027401 2 62264 98.997 51.884 1 0.70778 0.79434 0 92563000 69802000 22762000 36954 828 13955 14337 57944;57945 57944 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2927 2 495.292559 988.570566 86104.04 0.44862 0.0002222 0.15829 7.8398E-05 0.6069 0.00030059 495.292636671887 500.29653939722 102.92 2.5409 102.92 101.72 104.26 0 649 210 6 0 0 0 0.001025 6 63391 114.78 69.065 1 0.6883 0.77485 0 96823000 53113000 43710000 36955 828 13955 14337 57946;57947;57948;57949;57950;57951 57949 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2925 2 495.292559 988.570566 86269.77 0.39113 0.00019373 -0.027765 -1.3752E-05 0.36337 0.00017997 495.292503377956 500.296555436266 105.27 2.556 105.27 104.26 106.82 0 559 198 5 0 0 0 0.00095127 6 65680 124.59 67.035 1 0.68339 0.7599 0 75303000 42858000 32445000 36956 828 13955 14337 57952;57953;57954;57955;57956;57957 57956 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2928 2 495.292559 988.570566 86271.88 0.4431 0.00021946 0.16642 8.2429E-05 0.60952 0.00030189 495.292478041904 500.296581117802 107.33 1.0762 107.33 106.82 107.9 0 343 80 6 0 0 0 0.0031812 1 66907 97.602 51.884 1 0.64934 0.69364 0 44668000 26720000 17948000 36957 828 13955 14337 57958 57958 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.297 2 495.292559 988.570566 86269.78 0.30032 0.00014875 0.091611 4.5374E-05 0.39193 0.00019412 495.292482479487 500.296662742046 109.52 0.89619 109.52 109.22 110.12 0 195 65 5 0 0 0 0.0077064 1 68707 81.784 46.976 1 0.69675 0.76573 0 54160000 29228000 24932000 36958 828 13955 14337 57959 57959 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.293 2 495.292559 988.570566 86271.87 0.4969 0.00024611 -0.036072 -1.7866E-05 0.46082 0.00022824 495.29247205051 500.296695737991 116.07 4.207 116.07 114.36 118.57 0 585 280 4 0 0 0 0.00095293 7 74452 124.37 66.814 1 0.68467 0.70073 0 26261000 18488000 7773400 36959 828 13955 14337 57960;57961;57962;57963;57964;57965;57966 57962 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 86271.85 0.47686 0.00023618 -0.21094 -0.00010448 0.26591 0.00013171 495.292403300591 500.296528246393 122.5 4.8886 122.5 121.62 126.51 0 801 349 4 0 0 0 0.0045535 5 80525 93.262 47.544 1 0.67415 0.69674 0 20177000 15044000 5133000 36960 828 13955 14337 57967;57968;57969;57970;57971 57970 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2929 2 495.292559 988.570566 86060.8 0.51386 0.00025451 0.0032422 1.6058E-06 0.5171 0.00025612 495.292539929948 500.296605377665 129.5 0.80359 129.5 129.23 130.03 0 149 52 5 0 0 0 0.0023621 1 84298 100.45 54.733 1 0.6595 0.69122 0 12370000 8715900 3654100 36961 828 13955 14337 57972 57972 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2925 2 495.292559 988.570566 86315.89 0.10617 5.2586E-05 -0.080382 -3.9812E-05 0.02579 1.2774E-05 495.292364403281 500.296604768188 136.58 0.4754 136.58 136.23 136.71 0 128 49 5 0 0 0 0.033206 1 88842 50.127 25.204 1 0.72474 0.76958 0 3772200 2280700 1491500 36962 828 13955 14337 57973 57973 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2927 2 495.292559 988.570566 86117.63 0.13734 6.8023E-05 -0.049917 -2.4724E-05 0.087421 4.3299E-05 495.292420338114 500.296592712766 137.7 0.89682 137.7 137.04 137.94 0 264 90 6 0 0 0 0.026448 3 89103 54.549 19.742 1 0.69642 0.70823 0 7304900 4362000 2942800 36963 828 13955 14337 57974;57975;57976 57974 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2925 2 495.292559 988.570566 85920.26 0.1509 7.4741E-05 -0.13716 -6.7934E-05 0.013743 6.807E-06 495.292415764892 500.296516450599 138.24 0.68704 138.24 137.8 138.49 0 266 72 5 0 0 0 0.024215 2 89455 56.011 21.203 1 0.65672 0.69006 0 11224000 6862600 4361800 36964 828 13955 14337 57977;57978 57977 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2928 2 495.292559 988.570566 85898.61 0.17873 8.8523E-05 0.1262 6.2506E-05 0.30493 0.00015103 495.292535356071 500.296617341872 139.24 1.1682 139.24 138.54 139.7 0 502 133 6 0 0 0 0.0018583 1 89640 105.12 70.309 1 0.69146 0.72549 0 11073000 6275100 4797400 36965 828 13955 14337 57979 57979 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2924 2 495.292559 988.570566 85723.41 0.20167 9.9888E-05 0.16731 8.2869E-05 0.36899 0.00018276 495.292505257305 500.296725762555 139.68 1.1071 139.68 139.36 140.46 0 417 123 5 0 0 0 0.0052559 3 89808 91.041 52.148 1 0.67585 0.70791 0 12550000 8321400 4228500 36966 828 13955 14337 57980;57981;57982 57980 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2927 2 495.292559 988.570566 85723.41 0.25536 0.00012648 -0.011528 -5.7099E-06 0.24383 0.00012077 495.292436463023 500.296619442518 141.04 1.7586 141.04 140.45 142.2 0 629 193 5 0 0 0 0.0086589 4 90367 77.674 42.866 1 0.67048 0.68025 0 9810100 5604200 4205900 36967 828 13955 14337 57983;57984;57985;57986 57985 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2926 2 495.292559 988.570566 85898.58 0.4683 0.00023194 -0.21421 -0.00010609 0.25409 0.00012585 495.292363413906 500.296490732339 142.74 3.7945 142.74 141.34 145.14 0 1578 403 8 0 0 0 0.00098906 7 90559 119.57 70.207 1 0.6864 0.70057 0 26791000 15998000 10793000 36968 828 13955 14337 57987;57988;57989;57990;57991;57992;57993 57987 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2926 2 495.292559 988.570566 NaN NaN NaN 0.12908 6.393E-05 NaN NaN NaN NaN 89.129 3.9602 89.129 88.943 92.904 0 0 0 0 5.2436E-41 4 53707 192.31 107.31 1 NaN NaN 0 18582000000 18582000000 0 36969 828 13955 14337 57994;57995;57996;57997 57994 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2965 2 495.292559 988.570566 NaN NaN NaN 0.75891 0.00037588 NaN NaN NaN NaN 92.241 1.0824 92.241 91.893 92.975 0 0 0 0 0.0087396 2 55784 79.597 48.694 1 NaN NaN 0 206760000 0 206760000 36970 828 13955 14337 57998;57999 57998 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 NaN NaN NaN 0.0020811 1.0308E-06 NaN NaN NaN NaN 93.812 3.3305 93.812 93.467 96.797 0 0 0 0 2.4414E-09 4 57822 142.64 93.277 1 NaN NaN 0 184970000 0 184970000 36971 828 13955 14337 58000;58001;58002;58003 58002 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2925 2 495.292559 988.570566 NaN NaN NaN 0.2437 0.0001207 NaN NaN NaN NaN 96.415 1.7959 96.415 95.001 96.797 0 0 0 0 0.0035779 2 58412 94.262 48.544 1 NaN NaN 0 163190000 163190000 0 36972 828 13955 14337 58004;58005 58004 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2926 2 495.292559 988.570566 NaN NaN NaN 0.1056 5.2302E-05 NaN NaN NaN NaN 108.43 1.5315 108.43 107.71 109.24 0 0 0 0 0.0035921 2 68134 94.006 60.456 1 NaN NaN 0 32574000 32574000 0 36973 828 13955 14337 58006;58007 58007 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 NaN NaN NaN -0.15276 -7.566E-05 NaN NaN NaN NaN 110.4 0.60431 110.4 110.06 110.66 0 0 0 0 0.0043751 1 69363 91.041 45.323 1 NaN NaN 0 23834000 0 23834000 36974 828 13955 14337 58008 58008 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2972 2 495.292559 988.570566 NaN NaN NaN -0.5305 -0.00026275 NaN NaN NaN NaN 111.34 1.0848 111.34 110.6 111.68 -7.6294E-06 0 0 0 0.0025458 1 69962 107.43 49.87 1 NaN NaN 0 15652000 0 15652000 36975 828 13955 14337 58009 58009 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.297 2 495.292559 988.570566 NaN NaN NaN -0.23504 -0.00011641 NaN NaN NaN NaN 112.52 1.3022 112.52 111.83 113.13 0 0 0 0 0.027557 2 71316 60.76 25.952 1 NaN NaN 0 8576800 0 8576800 36976 828 13955 14337 58010;58011 58011 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2972 2 495.292559 988.570566 NaN NaN NaN -0.16138 -7.993E-05 NaN NaN NaN NaN 113.38 1.7223 113.38 113.13 114.85 0 0 0 0 0.011958 2 72565 74.415 30.23 1 NaN NaN 0 10430000 0 10430000 36977 828 13955 14337 58012;58013 58013 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2971 2 495.292559 988.570566 NaN NaN NaN -0.0031678 -1.569E-06 NaN NaN NaN NaN 115.25 1.4957 115.25 114.85 116.35 7.6294E-06 0 0 0 0.0032934 2 73881 99.375 50.016 1 NaN NaN 0 14138000 0 14138000 36978 828 13955 14337 58014;58015 58015 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2934 2 495.292559 988.570566 NaN NaN NaN -0.011593 -5.7419E-06 NaN NaN NaN NaN 118.93 0.82496 118.93 118.57 119.39 0 0 0 0 0.017699 1 76521 66.799 31.991 1 NaN NaN 0 13670000 13670000 0 36979 828 13955 14337 58016 58016 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2965 2 495.292559 988.570566 NaN NaN NaN -0.26169 -0.00012962 NaN NaN NaN NaN 125.84 1.1134 125.84 124.92 126.04 0 0 0 0 0.041784 1 81672 53.166 18.359 1 NaN NaN 0 4728600 0 4728600 36980 828 13955 14337 58017 58017 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2927 2 495.292559 988.570566 NaN NaN NaN -0.27751 -0.00013745 NaN NaN NaN NaN 126.66 1.758 126.66 126 127.76 7.6294E-06 0 0 0 0.0077322 2 82346 81.784 46.489 1 NaN NaN 0 6775400 6775400 0 36981 828 13955 14337 58018;58019 58018 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2927 2 495.292559 988.570566 NaN NaN NaN 0.031124 1.5415E-05 NaN NaN NaN NaN 128.51 1.0354 128.51 127.76 128.79 0 0 0 0 0.041784 1 83823 53.166 18.359 1 NaN NaN 0 5808600 5808600 0 36982 828 13955 14337 58020 58020 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2922 2 495.292559 988.570566 NaN NaN NaN -0.11979 -5.9333E-05 NaN NaN NaN NaN 131.74 3.5152 131.74 130.03 133.54 0 0 0 0 5.7633E-05 5 85934 121.29 71.934 1 NaN NaN 0 5912600 5912600 0 36983 828 13955 14337 58021;58022;58023;58024;58025 58023 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2967 2 495.292559 988.570566 NaN NaN NaN -0.47568 -0.0002356 NaN NaN NaN NaN 145.27 1.2891 145.27 144.8 146.09 0 0 0 0 0.0090383 1 91234 79.116 40.324 1 NaN NaN 0 29108000 0 29108000 36984 828 13955 14337 58026 58026 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2926 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.034 1 92.034 91.534 92.534 0 0 0 0 0.00041382 1 55774 107.43 61.711 1 36985 828 13955 14337 58027 58027 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2931 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.793 1 92.793 92.293 93.293 0 0 0 0 0.0083405 1 56241 79.116 44.308 1 36986 828 13955 14337 58028 58028 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.14 1 108.14 107.64 108.64 -7.6294E-06 0 0 0 0.0030325 1 67475 97.602 58.81 1 36987 828 13955 14337 58029 58029 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.91 1 108.91 108.41 109.41 -7.6294E-06 0 0 0 0.0052597 1 68090 85.265 35.906 1 36988 828 13955 14337 58030 58030 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2928 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.74 1 109.74 109.24 110.24 0 0 0 0 0.0010302 1 68767 105.12 47.557 1 36989 828 13955 14337 58031 58031 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2932 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.5 1 110.5 110 111 0 0 0 0 0.0041961 1 69412 91.9 46.182 1 36990 828 13955 14337 58032 58032 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2925 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.27 1 111.27 110.77 111.77 7.6294E-06 0 0 0 0.0038176 1 70018 94.262 48.544 1 36991 828 13955 14337 58033 58033 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.26 1 118.26 117.76 118.76 7.6294E-06 0 0 0 0.022142 1 75874 66.682 31.874 1 36992 828 13955 14337 58034 58034 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2971 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.49 1 119.49 118.99 119.99 0 0 0 0 0.0038176 1 76875 94.262 55.47 1 36993 828 13955 14337 58035 58035 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2926 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.81 1 119.81 119.31 120.31 0 0 0 0 0.0063187 1 77139 81.784 42.992 1 36994 828 13955 14337 58036 58036 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2964 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.25 1 120.25 119.75 120.75 0 0 0 0 0.012508 1 77488 73.616 38.809 1 36995 828 13955 14337 58037 58037 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2926 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.57 1 120.57 120.07 121.07 7.6294E-06 0 0 0 0.021414 1 77758 67.032 32.224 1 36996 828 13955 14337 58038 58038 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2965 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.01 1 121.01 120.51 121.51 7.6294E-06 0 0 0 0.021414 1 78115 67.032 32.224 1 36997 828 13955 14337 58039 58039 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 495.2925 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.33 1 121.33 120.83 121.83 7.6294E-06 0 0 0 0.038292 1 78379 58.917 24.109 1 36998 828 13955 14337 58040 58040 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2969 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.78 1 121.78 121.28 122.28 7.6294E-06 0 0 0 0.00041382 1 78750 107.43 61.711 1 36999 828 13955 14337 58041 58041 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2966 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.35 1 126.35 125.85 126.85 -7.6294E-06 0 0 0 0.012508 1 82214 73.616 38.809 1 37000 828 13955 14337 58042 58042 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2969 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.14 1 127.14 126.64 127.64 7.6294E-06 0 0 0 0.012508 1 82805 73.616 38.809 1 37001 828 13955 14337 58043 58043 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.91 1 127.91 127.41 128.41 7.6294E-06 0 0 0 0.025562 1 83374 65.038 30.23 1 37002 828 13955 14337 58044 58044 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.58 1 130.58 130.08 131.08 0 0 0 0 0.0010302 1 85148 105.12 59.398 1 37003 828 13955 14337 58045 58045 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.34 1 131.34 130.84 131.84 1.5259E-05 0 0 0 0.0094332 1 85698 77.674 42.866 1 37004 828 13955 14337 58046 58046 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.11 1 132.11 131.61 132.61 0 0 0 0 0.025562 1 86279 65.038 30.23 1 37005 828 13955 14337 58047 58047 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2962 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.88 1 132.88 132.38 133.38 -1.5259E-05 0 0 0 0.0052597 1 86870 85.265 46.473 1 37006 828 13955 14337 58048 58048 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2928 2 495.292559 988.570566 86968.44 0.37495 0.00018571 -0.071688 -3.5507E-05 0.30327 0.00015021 495.29255361989 500.296452149024 81.355 1.005 81.355 80.782 81.787 0 398 85 8 0 0 0 0.0075857 2 49754 82.305 48.302 1 1.0266 1.175 0 85899000 44431000 41468000 37007 828 13955 14337 58049;58050 58050 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2929 2 495.292559 988.570566 86626.7 0.15389 7.6223E-05 -0.72959 -0.00036136 -0.57569 -0.00028514 495.29259532824 500.296850454753 82.953 1.1249 82.953 82.128 83.253 -7.6294E-06 279 93 5 0 0 0 0.024726 3 50816 55.676 26.527 1 0.8417 0.83552 0 16043000 9242000 6801100 37008 828 13955 14337 58051;58052;58053 58053 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2924 2 495.292559 988.570566 87013.42 0.26735 0.00013241 0.062051 3.0733E-05 0.3294 0.00016315 495.292502270442 500.296780625365 84.852 0.86881 84.852 84.227 85.096 7.6294E-06 215 72 4 0 0 0 0.026448 1 51921 54.549 19.742 1 0.64557 0.67012 0 21977000 12973000 9004800 37009 828 13955 14337 58054 58054 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.295 2 495.292559 988.570566 87690.3 0.34994 0.00017332 0.25664 0.00012711 0.60659 0.00030044 495.292572937029 500.29616308884 85.728 1.4832 85.728 85.018 86.502 7.6294E-06 378 122 8 0 0 0 0.0019563 2 53267 104.21 62.1 1 0.76584 0.85988 0 45707000 24474000 21233000 37010 828 13955 14337 58055;58056 58056 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2923 2 495.292559 988.570566 86372.91 0.01103 5.4629E-06 -0.11758 -5.8237E-05 -0.10655 -5.2774E-05 495.292417319794 500.295702214499 86.983 1.0502 86.983 86.285 87.335 0 261 90 5 0 0 0 0.0023307 2 53614 100.74 62.609 1 0.67588 0.74639 0 41708000 25903000 15805000 37011 828 13955 14337 58057;58058 58058 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2975 2 495.292559 988.570566 85494.18 0.39027 0.0001933 0.59601 0.0002952 0.98628 0.0004885 495.292826601718 500.297072475201 90.989 2.2441 90.989 90.852 93.096 7.6294E-06 735 192 7 0 0 0 0.00041924 3 57277 132.57 83.208 1 0.72153 0.84623 0 777100000 462580000 314520000 37012 828 13955 14337 58059;58060;58061 58061 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2927 2 495.292559 988.570566 86019.36 0.29592 0.00014657 0.18311 9.0692E-05 0.47903 0.00023726 495.292727989555 500.296635651099 93.786 0.43116 93.786 93.717 94.148 0 173 36 6 0 0 0 0.00021714 1 58494 135.35 89.632 1 0.67247 0.78092 0 349300000 213540000 135760000 37013 828 13955 14337 58062 58062 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2925 2 495.292559 988.570566 85769.02 0.34814 0.00017243 0.31828 0.00015764 0.66642 0.00033007 495.292693050194 500.296791611865 94.443 0.97536 94.443 94.133 95.108 0 405 82 8 0 0 0 1.733E-05 3 59039 143 99.881 1 0.67587 0.7794 0 232320000 136990000 95322000 37014 828 13955 14337 58063;58064;58065 58064 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2926 2 495.292559 988.570566 86045.65 0.62176 0.00030795 -0.0062939 -3.1173E-06 0.61546 0.00030483 495.292508235591 500.296641735701 95.169 0.8771 95.169 95.089 95.966 -7.6294E-06 400 73 9 0 0 0 0.0049823 1 59570 91.906 46.188 1 0.65615 0.75393 0 196100000 118780000 77327000 37015 828 13955 14337 58066 58066 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.293 2 495.292559 988.570566 86339.26 0.34859 0.00017266 0.20712 0.00010258 0.55571 0.00027524 495.292697248243 500.296719392127 97.154 3.3091 97.154 96.028 99.337 0 864 278 6 0 0 0 2.196E-05 6 60342 140.98 97.167 1 0.69403 0.79751 0 196820000 122480000 74349000 37016 828 13955 14337 58067;58068;58069;58070;58071;58072 58067 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2928 2 495.292559 988.570566 86049.65 0.30626 0.00015169 0.17946 8.8887E-05 0.48572 0.00024058 495.292537804758 500.296618581001 99.974 1.2066 99.974 99.337 100.54 7.6294E-06 426 97 6 0 0 0 0.00028343 3 62560 134.44 73.649 1 0.68484 0.78044 0 102330000 53020000 49315000 37017 828 13955 14337 58073;58074;58075 58074 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 86049.65 0.26407 0.00013079 0.18135 8.9822E-05 0.44542 0.00022061 495.292557531255 500.296698698295 100.81 1.3517 100.81 100.24 101.59 -7.6294E-06 469 108 6 0 0 0 0.0012624 3 63717 110.63 64.915 1 0.68956 0.78544 0 105980000 65629000 40355000 37018 828 13955 14337 58076;58077;58078 58077 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2923 2 495.292559 988.570566 86045.68 0.0064861 3.2125E-06 0.36784 0.00018219 0.37433 0.0001854 495.292659708192 500.296802358674 101.98 0.66341 101.98 101.46 102.12 0 233 50 7 0 0 0 0.0018583 2 64326 105.12 59.398 1 0.70086 0.79755 0 113550000 65594000 47959000 37019 828 13955 14337 58079;58080 58080 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.7941 2 495.292559 988.570566 86040.61 0.53404 0.00026451 -0.3282 -0.00016255 0.20584 0.00010195 495.29240058921 500.296048224361 102.41 2.0321 102.41 102.03 104.06 7.6294E-06 482 165 8 0 0 0 0.028561 1 64810 53.166 18.359 1 0.65238 0.74659 0 86374000 52433000 33941000 37020 828 13955 14337 58081 58081 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2967 2 495.292559 988.570566 86053.63 0.3807 0.00018856 0.14015 6.9414E-05 0.52085 0.00025797 495.292490228279 500.296655686175 105.46 2.2103 105.46 104.26 106.47 0 634 167 5 0 0 0 0.0031812 5 66662 97.602 49.967 1 0.70341 0.80366 0 90186000 49983000 40203000 37021 828 13955 14337 58082;58083;58084;58085;58086 58084 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2923 2 495.292559 988.570566 86339.23 0.38739 0.00019187 -0.069977 -3.4659E-05 0.31741 0.00015721 495.292388246719 500.29655979561 106.66 1.0511 106.66 106.44 107.49 7.6294E-06 317 75 6 0 0 0 0.0086589 1 68240 77.674 42.866 1 0.69758 0.78117 0 45042000 25036000 20006000 37022 828 13955 14337 58087 58087 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2928 2 495.292559 988.570566 86053.62 0.31977 0.00015838 -0.020138 -9.9742E-06 0.29963 0.0001484 495.292430629197 500.296602282933 108.18 1.6508 108.18 107.32 108.97 -7.6294E-06 395 116 5 0 0 0 0.00055005 3 68877 130.77 75.574 1 0.66431 0.72611 0 36198000 20514000 15685000 37023 828 13955 14337 58088;58089;58090 58088 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2925 2 495.292559 988.570566 86053.62 0.31995 0.00015847 0.01022 5.0621E-06 0.33017 0.00016353 495.292568600789 500.296529224733 110.08 2.7354 110.08 108.97 111.7 0 611 190 5 0 0 0 0.0011528 4 70827 111.65 54.089 1 0.69151 0.75572 0 30330000 16830000 13500000 37024 828 13955 14337 58091;58092;58093;58094 58092 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2971 2 495.292559 988.570566 86335.22 0.36579 0.00018117 -0.091193 -4.5167E-05 0.2746 0.00013601 495.292417352237 500.296632140669 113.14 2.3573 113.14 111.45 113.81 7.6294E-06 552 166 4 0 0 0 0.0077064 3 72376 81.784 42.992 1 0.69141 0.74903 0 27501000 16909000 10591000 37025 828 13955 14337 58095;58096;58097 58095 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2931 2 495.292559 988.570566 86335.24 0.3848 0.00019059 0.11722 5.8058E-05 0.50202 0.00024865 495.292534232245 500.296639766286 115.82 2.2833 115.82 114.71 117 -7.6294E-06 395 146 4 0 0 0 0.0031812 2 75520 97.602 51.884 1 0.68427 0.74061 0 27229000 16382000 10847000 37026 828 13955 14337 58098;58099 58098 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2932 2 495.292559 988.570566 86335.23 0.39684 0.00019655 -0.055803 -2.7639E-05 0.34104 0.00016891 495.292441380616 500.296666999413 117.78 5.9992 117.78 116.44 122.43 -7.6294E-06 946 406 4 0 0 0 0.0075857 9 79144 82.305 48.755 1 0.66393 0.72611 0 34781000 20557000 14225000 37027 828 13955 14337 58100;58101;58102;58103;58104;58105;58106;58107;58108 58107 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 86335.22 0.51305 0.00025411 -0.099468 -4.9266E-05 0.41358 0.00020484 495.292440355092 500.296550500905 122.97 1.9182 122.97 122.34 124.26 0 509 142 4 0 0 0 0.0042374 3 82161 94.262 48.544 1 0.65473 0.70612 0 26196000 15497000 10699000 37028 828 13955 14337 58109;58110;58111 58111 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2967 2 495.292559 988.570566 86335.21 0.62751 0.0003108 -0.25391 -0.00012576 0.3736 0.00018504 495.292368162095 500.296528094157 124.41 1.4518 124.41 124.22 125.67 0 309 100 4 0 0 0 0.0041914 2 83382 94.407 55.616 1 0.6737 0.66656 0 12407000 7595300 4812100 37029 828 13955 14337 58112;58113 58113 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2929 2 495.292559 988.570566 86626.77 0.51056 0.00025287 0.066189 3.2783E-05 0.57674 0.00028566 495.292412729287 500.296541691628 126.7 2.0075 126.7 125.65 127.65 0 454 124 5 0 0 0 0.0068997 5 84585 85.265 50.457 1 0.72514 0.7152 0 12956000 6657900 6298200 37030 828 13955 14337 58114;58115;58116;58117;58118 58116 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2923 2 495.292559 988.570566 86335.23 0.46788 0.00023174 -0.072325 -3.5822E-05 0.39555 0.00019591 495.292453434836 500.296581950672 128.26 0.89037 128.26 127.6 128.49 0 160 56 4 0 0 0 0.0086435 1 85877 77.741 42.933 1 0.72463 0.71598 0 12642000 6911300 5730700 37031 828 13955 14337 58119 58119 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2924 2 495.292559 988.570566 86626.75 0.4637 0.00022967 -0.14178 -7.0223E-05 0.32192 0.00015944 495.292424985364 500.296567958221 130.74 1.5401 130.74 129.68 131.22 1.5259E-05 235 106 5 0 0 0 0.0043182 2 87456 94.006 48.289 1 0.6691 0.66436 0 11928000 6354900 5573500 37032 828 13955 14337 58120;58121 58121 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 86579.76 0.52404 0.00025955 -0.14371 -7.118E-05 0.38032 0.00018837 495.292387990133 500.296556009576 132.07 2.5589 132.07 131.01 133.57 0 460 150 4 0 0 0 0.00098906 5 88496 119.57 70.207 1 0.69687 0.69165 0 16011000 8823600 7186900 37033 828 13955 14337 58122;58123;58124;58125;58126 58123 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2928 2 495.292559 988.570566 85301.22 0.21353 0.00010576 0.092963 4.6044E-05 0.30649 0.0001518 495.292476784772 500.296673840971 139.5 3.5716 139.5 138.54 142.11 0 1285 402 5 0 0 0 0.0082133 10 91850 79.597 42.866 1 0.68686 0.67969 0 12378000 7309700 5068400 37034 828 13955 14337 58127;58128;58129;58130;58131;58132;58133;58134;58135;58136 58134 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2925 2 495.292559 988.570566 85301.23 -0.030511 -1.5112E-05 0.24555 0.00012162 0.21504 0.00010651 495.292570234924 500.296795434041 142.7 2.482 142.7 142.04 144.52 -1.5259E-05 1167 273 7 0 0 0 0.0052559 5 92182 91.041 56.233 1 0.68246 0.74753 0 31781000 19155000 12626000 37035 828 13955 14337 58137;58138;58139;58140;58141 58138 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2929 2 495.292559 988.570566 NaN NaN NaN 0.020961 1.0382E-05 NaN NaN NaN NaN 83.698 0.39236 83.698 83.463 83.855 7.6294E-06 0 0 0 0.034887 1 51381 56.27 31.347 1 NaN NaN 0 7954100 7954100 0 37036 828 13955 14337 58142 58142 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2924 2 495.292559 988.570566 NaN NaN NaN 0.086305 4.2746E-05 NaN NaN NaN NaN 86.158 0.46094 86.158 85.906 86.367 0 0 0 0 0.00089046 1 53129 114.72 74.623 1 NaN NaN 0 13103000 13103000 0 37037 828 13955 14337 58143 58143 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2934 2 495.292559 988.570566 NaN NaN NaN 0.18077 8.9535E-05 NaN NaN NaN NaN 87.979 3.6174 87.979 87.256 90.874 0 0 0 0 2.0181E-08 5 55112 135.87 90.147 1 NaN NaN 0 19212000000 19212000000 0 37038 828 13955 14337 58144;58145;58146;58147;58148 58146 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2965 2 495.292559 988.570566 NaN NaN NaN 0.18445 9.1355E-05 NaN NaN NaN NaN 93.655 0.65617 93.655 93.071 93.727 0 0 0 0 3.9236E-05 1 57957 124.37 75.015 1 NaN NaN 0 149450000 0 149450000 37039 828 13955 14337 58149 58149 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2964 2 495.292559 988.570566 NaN NaN NaN 0.22159 0.00010975 NaN NaN NaN NaN 102.9 1.3944 102.9 102.68 104.08 0 0 0 0 2.492E-08 2 64913 134.06 73.269 1 NaN NaN 0 44719000 0 44719000 37040 828 13955 14337 58150;58151 58150 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2931 2 495.292559 988.570566 NaN NaN NaN -0.013591 -6.7315E-06 NaN NaN NaN NaN 114.79 1.6422 114.79 113.69 115.33 0 0 0 0 0.0025458 1 74864 107.43 49.87 1 NaN NaN 0 13884000 13884000 0 37041 828 13955 14337 58152 58152 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2971 2 495.292559 988.570566 NaN NaN NaN -0.018124 -8.9764E-06 NaN NaN NaN NaN 120.44 0.59628 120.44 120.31 120.9 0 0 0 0 0.0090383 1 79696 79.116 44.308 1 NaN NaN 0 6326500 0 6326500 37042 828 13955 14337 58153 58153 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2972 2 495.292559 988.570566 NaN NaN NaN -0.16064 -7.9566E-05 NaN NaN NaN NaN 121.07 1.4402 121.07 120.9 122.34 0 0 0 0 0.0077322 2 80966 81.784 36.066 1 NaN NaN 0 11007000 0 11007000 37043 828 13955 14337 58154;58155 58155 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2966 2 495.292559 988.570566 NaN NaN NaN 0.122 6.0426E-05 NaN NaN NaN NaN 129.14 0.71793 129.14 128.97 129.68 0 0 0 0 0.0064698 1 86461 85.265 39.547 1 NaN NaN 0 4832000 0 4832000 37044 828 13955 14337 58156 58156 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2967 2 495.292559 988.570566 NaN NaN NaN 0.005712 2.8291E-06 NaN NaN NaN NaN 129.98 0.68727 129.98 129.67 130.36 -1.5259E-05 0 0 0 0.0090383 1 87025 79.116 40.324 1 NaN NaN 0 4570100 0 4570100 37045 828 13955 14337 58157 58157 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2927 2 495.292559 988.570566 NaN NaN NaN 0.10361 5.1317E-05 NaN NaN NaN NaN 137.6 0.66364 137.6 137.25 137.91 0 0 0 0 0.013373 1 91070 72.138 37.331 1 NaN NaN 0 5239100 5239100 0 37046 828 13955 14337 58158 58158 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2928 2 495.292559 988.570566 NaN NaN NaN -0.015367 -7.6112E-06 NaN NaN NaN NaN 138.23 0.56305 138.23 137.9 138.46 0 0 0 0 0.012455 1 91275 73.616 38.809 1 NaN NaN 0 5899500 5899500 0 37047 828 13955 14337 58159 58159 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.297 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.646 1 96.646 96.146 97.146 -7.6294E-06 0 0 0 0.0043338 1 60292 91.041 56.233 1 37048 828 13955 14337 58160 58160 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2969 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.936 1 98.936 98.436 99.436 0 0 0 0 0.00095709 1 61959 105.39 56.032 1 37049 828 13955 14337 58161 58161 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2941 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.82 1 102.82 102.32 103.32 0 0 0 0 0.0017817 1 64944 102.3 60.794 1 37050 828 13955 14337 58162 58162 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2928 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.24 1 106.24 105.74 106.74 0 0 0 0 0.0041951 1 67612 91.906 53.115 1 37051 828 13955 14337 58163 58163 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.2927 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.33 1 109.33 108.83 109.83 -7.6294E-06 0 0 0 0.0001255 1 70162 119.89 49.62 1 37052 828 13955 14337 58164 58164 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2973 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.26 1 114.26 113.76 114.76 -7.6294E-06 0 0 0 0.041785 1 74291 57.281 22.473 1 37053 828 13955 14337 58165 58165 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2968 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.02 1 115.02 114.52 115.52 0 0 0 0 0.007976 1 74968 79.597 33.879 1 37054 828 13955 14337 58166 58166 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2972 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.65 1 128.65 128.15 129.15 0 0 0 0 0.025562 1 85975 65.038 30.23 1 37055 828 13955 14337 58167 58167 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 495.293 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.24 1 129.24 128.74 129.74 0 0 0 0 0.0030325 1 86306 97.602 48.243 1 37056 828 13955 14337 58168 58168 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.2963 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 138.42 1 138.42 137.92 138.92 0 0 0 0 0.045764 1 91331 56.011 21.203 1 37057 828 13955 14337 58169 58169 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.297 2 495.292559 988.570566 86227.2 0.30521 0.00015117 -0.038901 -1.9267E-05 0.26631 0.0001319 495.292418490462 500.296629842104 93.474 0.81627 93.474 93.17 93.986 0 248 54 6 0 0 0 0.011877 2 52150 68.915 33.93 1 0.77724 0.66651 0 8532300 4759600 3772700 37058 828 13955 14337 58170;58171 58170 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2929 2 495.292559 988.570566 85901.96 0.51355 0.00025436 0.061264 3.0343E-05 0.57482 0.0002847 495.292480799698 500.296645455141 118.67 2.4089 118.67 117.53 119.94 7.6294E-06 363 109 5 0 0 0 0.012794 4 69627 66.799 31.991 1 0.71066 0.60592 0 5576600 3547800 2028800 37059 828 13955 14337 58172;58173;58174;58175 58172 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2927 2 495.292559 988.570566 86154.52 0.24833 0.00012299 0.19563 9.6892E-05 0.44395 0.00021989 495.292629981537 500.296708323288 120.45 1.2617 120.45 119.79 121.05 0 151 58 4 0 0 0 0.0098384 2 71527 73.616 38.809 1 0.76522 0.64389 0 4505900 2319000 2186900 37060 828 13955 14337 58176;58177 58177 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.2971 2 495.292559 988.570566 86154.52 0.31643 0.00015673 0.11165 5.5299E-05 0.42808 0.00021203 495.292541177253 500.296664017944 130.73 0.9574 130.73 130.27 131.23 0 124 45 4 0 0 0 0.04808 2 79517 44.447 19.524 1 0.68807 0.59696 0 2127500 1189900 937590 37061 828 13955 14337 58178;58179 58179 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.2962 2 495.292559 988.570566 86408.53 0.42367 0.00020984 -0.048131 -2.3839E-05 0.37553 0.000186 495.292618555941 500.29648526207 131.69 1.6431 131.69 130.92 132.57 0 252 76 5 0 0 0 0.04808 2 80099 44.447 19.524 1 0.68023 0.58825 0 2614700 1370800 1243900 37062 828 13955 14337 58180;58181 58181 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2923 2 495.292559 988.570566 88348.72 0.50831 0.00025176 -0.5009 -0.00024809 0.0074107 3.6705E-06 495.291802138476 500.29660059781 143.13 0.14694 143.13 143.02 143.16 0 59 15 5 0 0 0 0.04808 1 84816 44.447 19.524 1 0.73495 0.65434 0 874420 505690 368730 37063 828 13955 14337 58182 58182 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.1631 2 495.292559 988.570566 NaN NaN NaN 0.22762 0.00011274 NaN NaN NaN NaN 102.04 5.2819 102.04 101.57 106.85 7.6294E-06 0 0 0 1.3213E-40 8 57751 189.62 112.77 1 NaN NaN 0 1854500000 1854500000 0 37064 828 13955 14337 58183;58184;58185;58186;58187;58188;58189;58190 58184 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2928 2 495.292559 988.570566 NaN NaN NaN 0.66113 0.00032745 NaN NaN NaN NaN 107.37 10.824 107.37 106.71 117.53 7.6294E-06 0 0 0 0.0025458 14 61261 107.43 58.071 1 NaN NaN 0 35320000 35320000 0 37065 828 13955 14337 58191;58192;58193;58194;58195;58196;58197;58198;58199;58200;58201;58202;58203;58204 58191 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2928 2 495.292559 988.570566 NaN NaN NaN 0.12949 6.4134E-05 NaN NaN NaN NaN 121.05 0.86273 121.05 120.62 121.48 0 0 0 0 0.024458 1 72116 62.659 33.51 1 NaN NaN 0 2413700 2413700 0 37066 828 13955 14337 58205 58205 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.293 2 495.292559 988.570566 NaN NaN NaN -0.026898 -1.3322E-05 NaN NaN NaN NaN 127.94 4.5617 127.94 125.89 130.45 0 0 0 0 0.030461 1 76923 58.981 20.189 1 NaN NaN 0 1975200 1975200 0 37067 828 13955 14337 58206 58206 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2928 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.01 1 122.01 121.51 122.51 -7.6294E-06 0 0 0 0.014267 1 72716 71.296 36.488 1 37068 828 13955 14337 58207 58207 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 495.2926 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.38 1 124.38 123.88 124.88 0 0 0 0 0.050341 1 74517 54.549 19.742 1 37069 828 13955 14337 58208 58208 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2921 2 495.292559 988.570566 86528.91 0.09737 4.8227E-05 0.017262 8.5495E-06 0.11463 5.6776E-05 495.292446759437 500.296630735887 93.408 2.2532 93.408 92.664 94.917 0 377 145 6 0 0 0 0.011764 3 51245 69.176 30.123 1 0.81907 0.67026 0 9050700 4690500 4360300 37070 828 13955 14337 58209;58210;58211 58209 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2939 2 495.292559 988.570566 87690.02 0.14859 7.3594E-05 0.56338 0.00027904 0.71197 0.00035263 495.292984743348 500.296409711467 95.034 0.43032 95.034 94.751 95.181 0 65 28 4 0 0 0 0.051374 1 52404 43.246 18.324 1 0.67793 0.58674 0 1624300 947900 676420 37071 828 13955 14337 58212 58212 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.2971 2 495.292559 988.570566 87690.01 0.081981 4.0605E-05 0.31975 0.00015837 0.40173 0.00019897 495.292755782366 500.296603394422 95.388 0.53737 95.388 95.059 95.596 -7.6294E-06 123 39 4 0 0 0 0.04808 1 52612 44.447 19.524 1 0.76782 0.68002 0 1912200 1101100 811090 37072 828 13955 14337 58213 58213 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2926 2 495.292559 988.570566 86611.25 0.057719 2.8588E-05 -0.041594 -2.0601E-05 0.016126 7.9869E-06 495.2924421145 500.296112066031 100.92 1.6763 100.92 99.695 101.37 0 390 129 5 0 0 0 0.0031812 3 56436 97.602 58.81 1 0.78862 0.65715 0 6874100 3883900 2990200 37073 828 13955 14337 58214;58215;58216 58216 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2927 2 495.292559 988.570566 86623.03 0.13883 6.8761E-05 0.25819 0.00012788 0.39702 0.00019664 495.292538709673 500.296727089759 117.76 1.6622 117.76 116.76 118.43 -7.6294E-06 288 76 6 0 0 0 0.011407 3 68487 69.998 31.207 1 0.76456 0.63435 0 5616500 3271200 2345200 37074 828 13955 14337 58217;58218;58219 58218 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2928 2 495.292559 988.570566 86611.26 0.36177 0.00017918 0.04641 2.2986E-05 0.40818 0.00020217 495.292485696417 500.296644065043 118.9 1.8402 118.9 118.18 120.02 0 276 83 5 0 0 0 0.0090157 3 69093 76.134 41.327 1 0.76785 0.63726 0 5796700 3570300 2226400 37075 828 13955 14337 58220;58221;58222 58220 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2926 2 495.292559 988.570566 86611.26 0.35035 0.00017353 0.1238 6.1319E-05 0.47415 0.00023484 495.29257596342 500.296646402195 120.5 2.2529 120.5 119.2 121.45 0 325 110 5 0 0 0 0.0086435 5 70329 77.741 44.19 1 0.69918 0.58235 0 5004300 3101800 1902500 37076 828 13955 14337 58223;58224;58225;58226;58227 58224 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2926 2 495.292559 988.570566 86260.5 0.43845 0.00021716 0.1517 7.5136E-05 0.59015 0.0002923 495.292507610611 500.798321135129 122 0.85564 122 121.39 122.24 0 117 44 4 0 0 0 0.0098384 1 71514 73.616 34.825 1 0.60201 0.52863 0 4160200 2680500 1479700 37077 828 13955 14337 58228 58228 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2929 2 495.292559 988.570566 86260.49 0.36381 0.00018019 0.097986 4.8532E-05 0.4618 0.00022873 495.292509217698 500.296635990181 127.59 4.6337 127.59 126.44 131.08 0 470 195 4 0 0 0 0.011407 8 77600 69.998 21.709 1 0.75564 0.66392 0 3609400 2299800 1309600 37078 828 13955 14337 58229;58230;58231;58232;58233;58234;58235;58236 58235 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2931 2 495.292559 988.570566 86611.23 0.69266 0.00034307 -0.20613 -0.00010209 0.48653 0.00024098 495.292343020001 500.296550394306 133.12 2.8749 133.12 131.28 134.16 0 325 124 5 0 0 0 0.042651 5 79327 46.426 19.524 1 0.76663 0.67512 0 3636100 2118300 1517900 37079 828 13955 14337 58237;58238;58239;58240;58241 58237 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.2967 2 495.292559 988.570566 87836.85 0.46113 0.00022839 -0.43905 -0.00021746 0.022074 1.0933E-05 495.291989564361 500.29670565346 141.62 0.28276 141.62 141.46 141.74 0 103 30 5 0 0 0 0.063595 1 83764 38.792 17.492 1 0.73354 0.63091 0 1114800 644570 470190 37080 828 13955 14337 58242 58242 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2923 2 495.292559 988.570566 87297.04 0.4437 0.00021976 -0.13508 -6.6903E-05 0.30862 0.00015286 495.292152281029 500.296806483415 142.83 0.17519 142.83 142.77 142.95 0 63 18 5 0 0 0 0.044593 1 84006 45.718 19.981 1 0.83334 0.71638 0 1106400 551210 555180 37081 828 13955 14337 58243 58243 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2928 2 495.292559 988.570566 88386.58 0.42428 0.00021014 -0.11861 -5.8747E-05 0.30567 0.0001514 495.292310094711 500.296602441796 146.13 0.23958 146.13 145.95 146.19 0 78 25 5 0 0 0 0.063595 1 84931 38.792 17.492 1 0.93819 0.85967 0 355780 183730 172060 37082 828 13955 14337 58244 58244 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2933 2 495.292559 988.570566 NaN NaN NaN 0.28365 0.00014049 NaN NaN NaN NaN 101.85 5.4341 101.85 101.34 106.77 7.6294E-06 0 0 0 0.0018185 7 57435 110.63 75.825 1 NaN NaN 0 1786100000 1786100000 0 37083 828 13955 14337 58245;58246;58247;58248;58249;58250;58251 58246 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2934 2 495.292559 988.570566 NaN NaN NaN 0.84321 0.00041764 NaN NaN NaN NaN 107.28 10.53 107.28 106.49 117.02 0 0 0 0 0.0029587 12 64902 105.39 59.673 1 NaN NaN 0 34625000 34625000 0 37084 828 13955 14337 58252;58253;58254;58255;58256;58257;58258;58259;58260;58261;58262;58263 58259 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.2967 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.78 1 121.78 121.28 122.28 7.6294E-06 0 0 0 0.022142 1 71624 66.682 31.874 1 37085 828 13955 14337 58264 58264 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2926 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.19 1 124.19 123.69 124.69 0 0 0 0 0.038292 1 73471 58.917 20.679 1 37086 828 13955 14337 58265 58265 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 500.2963 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.22 1 124.22 123.72 124.72 0 0 0 0 0.046812 1 73492 55.676 16.884 1 37087 828 13955 14337 58266 58266 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 495.2926 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.79 1 125.79 125.29 126.29 0 0 0 0 0.038505 1 74676 58.815 24.007 1 37088 828 13955 14337 58267 58267 VFLENVIRDAVTYTEHAK 18 1 1 Unmodified _VFLENVIRDAVTYTEHAK_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.0314 4 527.031102 2104.0953 NaN NaN NaN -0.18028 -9.5013E-05 NaN NaN NaN NaN 91.38 0.29133 91.38 91.143 91.434 0 0 0 0 0.053485 1 55265 23.1 17.782 1 NaN NaN 0 7274200 7274200 0 37089 828 13956 14338 58268 58268 VFLENVIRDAVTYTEHAK 18 1 1 Unmodified _VFLENVIRDAVTYTEHAK_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.7149 3 702.372378 2104.0953 72518.11 0.58869 0.00041348 -0.26583 -0.00018671 0.32286 0.00022676 702.371888918383 708.379837050989 102.25 0.57131 102.25 102.03 102.6 0 194 42 7 0 0 0 0.00025217 1 57958 43.794 43.794 1 0.91247 0.78254 0 10844000 5398900 5444800 37090 828 13956 14338 58269 58269 VFLENVIRDAVTYTEHAK 18 1 1 Unmodified _VFLENVIRDAVTYTEHAK_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.0319 4 527.031102 2104.0953 89394.23 0.29183 0.0001538 -0.074439 -3.9232E-05 0.21739 0.00011457 527.031630419103 531.536649402473 102.2 0.53002 102.2 102.04 102.57 7.6294E-06 133 39 6 0 0 0 0.030298 1 57962 16.924 16.924 1 0.82544 0.69245 0 6867200 3568500 3298700 37091 828 13956 14338 58270 58270 VFLENVIRDAVTYTEHAK 18 1 1 Unmodified _VFLENVIRDAVTYTEHAK_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.7153 3 702.372378 2104.0953 71202.43 0.74014 0.00051985 0.063929 4.4902E-05 0.80407 0.00056475 702.371860773457 708.380060267757 127.55 0.54368 127.55 127.19 127.73 7.6294E-06 104 21 9 0 0 0 0.00016327 1 76812 46.159 46.159 1 1.1334 0.97742 0 12627000 6160600 6466200 37092 828 13956 14338 58271 58271 VFLENVIRDAVTYTEHAK 18 1 1 Unmodified _VFLENVIRDAVTYTEHAK_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.7875 4 527.031102 2104.0953 88954.38 0.28389 0.00014962 -0.26384 -0.00013905 0.020048 1.0566E-05 527.28085452183 531.536596956563 101.94 0.4059 101.94 101.74 102.14 0 119 31 5 0 0 0 0.042679 2 56896 13.427 10.139 1 0.84584 0.70834 0 5840700 3535400 2305300 37093 828 13956 14338 58272;58273 58272 VFLENVIRDAVTYTEHAK 18 1 1 Unmodified _VFLENVIRDAVTYTEHAK_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 703.0403 3 702.372378 2104.0953 72643.42 0.4486 0.00031508 -0.031231 -2.1936E-05 0.41737 0.00029315 702.70680377633 708.714479694403 101.97 0.4909 101.97 101.77 102.26 0 188 37 7 0 0 0 0.0063451 2 56912 26.146 26.146 1 0.7936 0.67123 0 10575000 5817300 4758100 37094 828 13956 14338 58274;58275 58275 VFLENVIRDAVTYTEHAK 18 1 1 Unmodified _VFLENVIRDAVTYTEHAK_ 0 0 1 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.3796 3 702.372378 2104.0953 73825.67 0.64317 0.00045174 -0.32391 -0.00022751 0.31925 0.00022424 702.371142207333 708.379749160356 127.27 0.54472 127.27 126.95 127.5 0 90 22 7 0 0 0 0.0004077 2 75673 39.657 35.219 1 1.266 1.0636 0 6971800 3452200 3519600 37095 828 13956 14338 58276;58277 58276 VFLHLADIYAK 11 1 0 Unmodified _VFLHLADIYAK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.3749 2 645.366256 1288.71796 NaN NaN NaN 0.090115 5.8157E-05 NaN NaN NaN NaN 93.856 0.50266 93.856 93.643 94.146 0 0 0 0 0.0026445 1 57147 72.607 59.57 1 NaN NaN 0 5845400 0 5845400 37096 1741 13957 14339 58278 58278 VFLHLADIYAK 11 1 0 Unmodified _VFLHLADIYAK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.3728 2 645.366256 1288.71796 79152.28 0.99287 0.00064077 0.35709 0.00023045 1.35 0.00087122 645.366673266879 649.37351128487 92.071 0.50366 92.071 91.844 92.347 0 116 43 4 0 0 0 0.00026127 1 57062 90.15 90.15 1 1.2469 1.2896 0 11384000 5301100 6083100 37097 1741 13957 14339 58279 58279 VFLHLADIYAK 11 1 0 Unmodified _VFLHLADIYAK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.3743 2 645.366256 1288.71796 NaN NaN NaN 0.84042 0.00054238 NaN NaN NaN NaN 105.55 0.68678 105.55 105.13 105.81 7.6294E-06 0 0 0 0.038861 2 60204 47.561 34.508 1 NaN NaN 0 1964500 0 1964500 37098 1741 13957 14339 58280;58281 58281 VFLLGEEVAQYDGAYK 16 1 0 Unmodified _VFLLGEEVAQYDGAYK_ 0 0 0 P11177;F8WF02;C9J634 P11177 P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 905.4613 2 901.453985 1800.89342 NaN NaN NaN -0.5922 -0.00053384 NaN NaN NaN NaN 112.05 0.53643 112.05 111.79 112.33 0 0 0 0 0.041969 1 70561 36.417 22.608 1 NaN NaN 0 5735700 0 5735700 37099 1468 13958 14340 58282 58282 VFLLGEEVAQYDGAYK 16 1 0 Unmodified _VFLLGEEVAQYDGAYK_ 0 0 0 P11177;F8WF02;C9J634 P11177 P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.4604 2 901.453985 1800.89342 NaN NaN NaN -0.25974 -0.00023414 NaN NaN NaN NaN 111.5 0.50806 111.5 111.23 111.74 0 0 0 0 0.039481 1 71836 36.982 30.878 1 NaN NaN 0 6105900 0 6105900 37100 1468 13958 14340 58283 58283 VFLMSESEK 9 1 0 Oxidation (M) _VFLM(ox)SESEK_ VFLM(1)SESEK VFLM(42.6)SESEK 0 1 0 B3KY11;A0A024R0Z3;Q9BUQ8;A8KA56 B3KY11 B3KY11 DDX23 Probable ATP-dependent RNA helicase DDX23 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.2698 2 543.262807 1084.51106 NaN NaN NaN 0.38908 0.00021137 NaN NaN NaN NaN 36.638 0.43923 36.638 36.461 36.9 3.8147E-06 0 0 0 0.019851 1 18958 42.599 26.396 1 NaN NaN 0 2576700 0 2576700 37101 63 13959 14341 58284 58284 36 VFLNGNK 7 1 0 Unmodified _VFLNGNK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 400.232 2 396.224146 790.433738 94405.8 0.15016 5.9498E-05 -0.16696 -6.6153E-05 -0.016797 -6.6553E-06 396.223860697457 400.231100975114 28.52 0.91635 28.52 28.17 29.086 -1.9073E-06 247 54 7 0 0 0 0.010895 2 13340 109.88 61.639 1 0.71216 0.82635 0 243580000 136810000 106770000 37102 1471 13960 14342 58285;58286 58286 VFLNGNK 7 1 0 Unmodified _VFLNGNK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 400.2313 2 396.224146 790.433738 95136.98 0.17645 6.9914E-05 -0.52126 -0.00020654 -0.34481 -0.00013662 396.223752923202 400.23103264513 27.942 0.6374 27.942 27.649 28.286 0 178 33 8 0 0 0 0.014977 2 13070 99.511 56.737 1 0.74682 0.87409 0 302600000 179250000 123350000 37103 1471 13960 14342 58287;58288 58287 VFLNGNK 7 1 0 Unmodified _VFLNGNK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 400.2312 2 396.224146 790.433738 95394.77 0.039179 1.5524E-05 0.29345 0.00011627 0.33263 0.0001318 396.224133594401 400.231272791394 31.256 1.0396 31.256 30.959 31.999 0 272 61 10 0 0 0 0.052963 1 13118 53.71 31.257 1 1.373 1.1106 0 23157000 10156000 13001000 37104 1471 13960 14342 58289 58289 VFLNILPPLTNSK 13 1 0 Unmodified _VFLNILPPLTNSK_ 0 0 0 A0A024RD30;Q9BX10;A8K2K2 A0A024RD30 A0A024RD30 GTPBP2 GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.4325 2 728.432127 1454.8497 78753.63 0.72005 0.0005245 0.40568 0.00029551 1.1257 0.00082001 728.432568234136 732.439407465823 122.26 0.39832 122.26 122.03 122.43 -7.6294E-06 64 27 4 0 0 0 0.00011166 1 79096 74.841 49.455 1 1.6508 1.8211 0 2901500 1371400 1530100 37105 377 13961 14343 58290 58290 VFLNILPPLTNSK 13 1 0 Unmodified _VFLNILPPLTNSK_ 0 0 0 A0A024RD30;Q9BX10;A8K2K2 A0A024RD30 A0A024RD30 GTPBP2 GTP-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.4319 2 728.432127 1454.8497 74788.64 0.63434 0.00046207 0.28908 0.00021058 0.92342 0.00067265 728.432582386134 732.439124839166 121.73 0.37393 121.73 121.51 121.89 7.6294E-06 76 27 4 0 0 0 0.0001269 1 80610 78.655 65.699 1 1.1696 1.2357 0 4242400 2013200 2229300 37106 377 13961 14343 58291 58291 VFLQYLPAIR 10 0 1 Unmodified _VFLQYLPAIR_ 0 0 0 B4DWV9;A0A024R8M0;Q14344 B4DWV9 B4DWV9 GNA13 Guanine nucleotide-binding protein subunit alpha-13 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.3679 2 610.363516 1218.71248 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.06 1 114.06 113.56 114.56 0 0 0 0 0.0044565 1 72314 64.836 43.33 1 37107 251 13962 14344 58292 58292 VFLQYLPAIR 10 0 1 Unmodified _VFLQYLPAIR_ 0 0 0 B4DWV9;A0A024R8M0;Q14344 B4DWV9 B4DWV9 GNA13 Guanine nucleotide-binding protein subunit alpha-13 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 615.3674 2 610.363516 1218.71248 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.4 1 113.4 112.9 113.9 7.6294E-06 0 0 0 0.0043044 1 73580 65.038 43.531 1 37108 251 13962 14344 58293 58293 VFLWGSFR 8 0 1 Unmodified _VFLWGSFR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.2783 2 506.27417 1010.53379 84723.91 0.62392 0.00031587 0.11985 6.0677E-05 0.74376 0.00037655 506.274145993359 511.278232001318 118.91 0.75752 118.91 118.68 119.44 7.6294E-06 137 36 6 0 0 0 0.016899 2 70230 60.799 56.662 1 1.0081 0.84907 0 4623500 2067500 2556000 37109 550 13963 14345 58294;58295 58294 VFLWGSFR 8 0 1 Unmodified _VFLWGSFR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.2784 2 506.27417 1010.53379 85055.25 0.62584 0.00031685 -0.12749 -6.4546E-05 0.49835 0.0002523 506.274040989768 511.278094689858 118.62 0.68329 118.62 118.38 119.06 -7.6294E-06 155 32 6 0 0 0 0.017078 2 69152 60.682 56.748 1 0.84157 0.69823 0 5422300 2934000 2488300 37110 550 13963 14345 58296;58297 58296 VFNCISYSPLCK 12 1 0 Unmodified _VFNCISYSPLCK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.3559 2 744.354705 1486.69486 71878.96 0.66412 0.00049434 -0.28433 -0.00021164 0.37979 0.0002827 744.35460062668 748.361559800442 85.908 0.70318 85.908 85.568 86.272 0 231 59 5 0 0 0 0.0006581 1 51556 67.726 67.726 1 0.84537 0.82862 0 20900000 11798000 9101800 37111 1792 13964 14346 58298 58298 VFNCISYSPLCK 12 1 0 Unmodified _VFNCISYSPLCK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.3574 2 744.354705 1486.69486 70458.6 0.89377 0.00066528 -0.086275 -6.4219E-05 0.80749 0.00060106 744.354757499449 748.361606900987 84.901 0.73519 84.901 84.611 85.347 0 265 63 5 0 0 0 0.0017153 1 52110 60.434 53.901 1 0.75738 0.76387 0 28173000 17471000 10702000 37112 1792 13964 14346 58299 58299 VFNCISYSPLCK 12 1 0 Unmodified _VFNCISYSPLCK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.3556 2 744.354705 1486.69486 70097.67 0.79752 0.00059364 -0.68326 -0.00050859 0.11426 8.5049E-05 744.354345363743 748.361477532778 98.441 0.78448 98.441 98.091 98.875 0 268 47 9 0 0 0 0.0017153 2 55411 60.434 60.434 1 1.2507 0.99415 0 10019000 4233100 5786000 37113 1792 13964 14346 58300;58301 58300 VFNCISYSPLCK 12 1 0 Unmodified _VFNCISYSPLCK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 748.3622 2 744.354705 1486.69486 69786.17 0.71377 0.0005313 -0.63647 -0.00047376 0.077302 5.754E-05 744.85599218769 748.361534427177 98.357 0.76285 98.357 97.994 98.757 -7.6294E-06 258 46 8 0 0 0 0.0056322 1 54480 50.452 49.078 1 1.2754 1.0535 0 11935000 5336600 6598800 37114 1792 13964 14346 58302 58302 VFNGEPGAHDAK 12 1 0 Unmodified _VFNGEPGAHDAK_ 0 0 0 O96028;Q05CW4;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.535 3 414.53516 1240.58365 95678.3 0.23553 9.7637E-05 0.064233 2.6627E-05 0.29977 0.00012426 414.534955520409 417.206582767124 19.274 0.31044 19.274 19.182 19.493 0 50 16 5 0 0 0 0.013607 1 5981 33.589 27.268 1 1.1588 1.2098 0 11821000 5551900 6268800 37115 1435 13965 14347 58303 58303 VFNGEPGAHDAK 12 1 0 Unmodified _VFNGEPGAHDAK_ 0 0 0 O96028;Q05CW4;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.3063 2 621.299101 1240.58365 77658.21 0.072315 4.493E-05 0.67367 0.00041855 0.74598 0.00046348 621.299351118323 625.306885292374 20.375 0.27901 20.375 20.234 20.513 0 32 7 6 0 0 0 0.025371 1 5835 34.803 19.421 1 1.9156 1.6075 0 2175200 824550 1350700 37116 1435 13965 14347 58304 58304 VFNGEPGAHDAK 12 1 0 Unmodified _VFNGEPGAHDAK_ 0 0 0 O96028;Q05CW4;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.3069 2 621.299101 1240.58365 76567.71 0.025872 1.6074E-05 0.63809 0.00039645 0.66396 0.00041252 621.299148503573 625.306750526153 20.347 0.3765 20.347 20.181 20.558 0 53 15 6 0 0 0 0.011722 1 5283 54.094 32.587 1 1.7461 1.4471 0 1744600 513610 1231000 37117 1435 13965 14347 58305 58305 VFNVFCLYGNVEK 13 1 0 Unmodified _VFNVFCLYGNVEK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0;M0R076 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.9025 2 794.895051 1587.77555 68649.16 1.0303 0.00081898 -0.58991 -0.00046892 0.44039 0.00035006 794.894677860559 798.901580773632 116.97 0.75246 116.97 116.58 117.33 0 236 54 8 0 0 0 7.6261E-05 2 74734 112.13 112.13 1 1.3412 1.3198 0 19858000 8307100 11551000 37118 865 13966 14348 58306;58307 58307 VFNVFCLYGNVEK 13 1 0 Unmodified _VFNVFCLYGNVEK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0;M0R076 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.9021 2 794.895051 1587.77555 68839.73 0.89166 0.00070878 -0.035906 -2.8541E-05 0.85576 0.00068024 794.895041082796 798.901743435602 116.4 0.52896 116.4 116.16 116.69 0 179 33 7 0 0 0 0.00011402 3 76129 89.548 89.548 1 1.448 1.5038 0 24666000 10694000 13972000 37119 865 13966 14348 58308;58309;58310 58309 VFNVFCLYGNVEK 13 1 0 Unmodified _VFNVFCLYGNVEK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0;M0R076 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.397 2 794.895051 1587.77555 67862.21 1.0015 0.00079605 -0.96347 -0.00076586 0.037975 3.0186E-05 795.39499503828 798.901830403402 128.76 0.71271 128.76 128.47 129.18 -1.5259E-05 150 32 9 0 0 0 0.00031131 2 77859 76.655 76.655 1 0.60816 0.4866 0 7144700 4346800 2797900 37120 865 13966 14348 58311;58312 58312 VFNVFCLYGNVEK 13 1 0 Unmodified _VFNVFCLYGNVEK_ 0 0 0 B2R959;Q6NTA2;P14866;M0QXS5;M0QYT0;M0R076 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 795.3961 2 794.895051 1587.77555 68336.84 0.92835 0.00073794 -0.69237 -0.00055036 0.23598 0.00018758 795.395079035962 798.901884369105 128.58 0.73279 128.58 128.18 128.92 0 136 29 8 0 0 0 0.0002409 2 76737 78.096 78.096 1 0.77192 0.62987 0 6206800 2860300 3346500 37121 865 13966 14348 58313;58314 58313 VFPGSTTEDYNLIVIER 17 0 1 Unmodified _VFPGSTTEDYNLIVIER_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 977.0031 2 977.00183 1951.98911 60595.91 0.61558 0.00060142 0.46745 0.0004567 1.083 0.0010581 977.003718786983 982.005905046936 112.11 0.67889 112.11 111.79 112.47 0 267 48 7 0 0 0 8.5377E-07 4 70704 114.56 114.56 1 1.3053 1.3352 0 34205000 15624000 18580000 37122 862 13967 14349 58315;58316;58317;58318 58318 VFPGSTTEDYNLIVIER 17 0 1 Unmodified _VFPGSTTEDYNLIVIER_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 977.0032 2 977.00183 1951.98911 60573.79 0.46057 0.00044997 0.70525 0.00068903 1.1658 0.001139 977.003917971216 982.507585645226 111.55 0.72383 111.55 111.22 111.94 0 258 48 7 0 0 0 6.0511E-08 3 72014 120.14 120.14 1 1.4365 1.5828 0 41205000 15928000 25277000 37123 862 13967 14349 58319;58320;58321 58320 VFPGSTTEDYNLIVIER 17 0 1 Unmodified _VFPGSTTEDYNLIVIER_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 982.0058 2 977.00183 1951.98911 61202.61 0.40669 0.00039733 -0.05672 -5.5416E-05 0.34997 0.00034192 977.502935320051 982.006101080527 123.15 1.2658 123.15 122.59 123.86 7.6294E-06 243 49 8 0 0 0 0.0015941 2 73437 46.797 46.797 1 1.1189 0.91285 0 14772000 6820800 7951400 37124 862 13967 14349 58322;58323 58322 VFPGSTTEDYNLIVIER 17 0 1 Unmodified _VFPGSTTEDYNLIVIER_ 0 0 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 982.007 2 977.00183 1951.98911 61466.14 0.45539 0.00044491 0.098768 9.6497E-05 0.55415 0.00054141 977.503638803558 982.005970184735 123.05 0.83907 123.05 122.7 123.54 -7.6294E-06 222 39 9 0 0 0 5.3072E-07 2 72470 95.631 95.631 1 1.2318 1.0154 0 14294000 5893900 8399800 37125 862 13967 14349 58324;58325 58324 VFPMPLPR 8 0 1 Oxidation (M) _VFPM(ox)PLPR_ VFPM(1)PLPR VFPM(58.17)PLPR 0 1 0 A8K4T8;Q15003;B4DRG7;E9PHA2;C9J470;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.7747 2 486.770406 971.526258 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.936 1 66.936 66.436 67.436 0 0 0 0 0.018276 1 39606 58.167 36.639 1 37126 740 13968 14350 58326 58326 576 VFPWFSVK 8 1 0 Unmodified _VFPWFSVK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.2791 2 505.278921 1008.54329 88024.78 0.68296 0.00034509 -0.10995 -5.5554E-05 0.57301 0.00028953 505.27879426721 509.285959593089 111.8 0.61191 111.8 111.56 112.18 0 98 44 4 0 0 0 0.042651 1 70418 46.426 34.657 1 0.83042 0.82354 0 8201800 5079700 3122100 37127 1680 13969 14351 58327 58327 VFQASPEDHEK 11 1 0 Unmodified _VFQASPEDHEK_ 0 0 0 B8ZZV5;Q8TCC3 B8ZZV5 B8ZZV5 MRPL30 39S ribosomal protein L30, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.803 2 643.804217 1285.59388 75749.32 0.41613 0.00026791 -0.45453 -0.00029263 -0.038396 -2.4719E-05 643.803996261735 647.810838805036 20.057 0.23811 20.057 19.954 20.192 0 30 8 7 0 0 0 0.0061204 2 6454 54.982 50.369 1 1.2061 1.2181 0 8371200 3941900 4429300 37128 1118 13970 14352 58328;58329 58329 VFQFLNAK 8 1 0 Unmodified _VFQFLNAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.7741 2 483.774003 965.533452 86418.83 0.26027 0.00012591 -0.016403 -7.9355E-06 0.24386 0.00011797 483.774266203913 487.780859485714 81.772 2.738 81.772 81.157 83.895 0 1192 234 8 0 0 0 0.0010307 5 49058 114.02 79.199 1 0.67418 0.81609 0 1845800000 1070000000 775830000 37129 1140 13971 14353 58330;58331;58332;58333;58334 58332 VFQFLNAK 8 1 0 Unmodified _VFQFLNAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.7735 2 483.774003 965.533452 NaN NaN NaN -1.1866 -0.00057405 NaN NaN NaN NaN 84.007 0.3645 84.007 83.895 84.259 0 0 0 0 0.0032549 1 50268 100.07 77.137 1 NaN NaN 0 5020100 5020100 0 37130 1140 13971 14353 58335 58335 VFQFLNAK 8 1 0 Unmodified _VFQFLNAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 973.9825 1 966.540729 965.533452 62070.79 0.32625 0.00031533 0.21678 0.00020953 0.54303 0.00052486 966.540891172421 974.554863333612 81.771 1.132 81.771 81.418 82.55 0 435 98 6 0 0 0 0.025335 1 48930 97.068 30.033 1 0.69157 0.7817 0 143930000 83012000 60922000 37131 1140 13971 14353 58336 58336 VFQFLNAK 8 1 0 Unmodified _VFQFLNAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 487.7817 2 483.774003 965.533452 86039.4 0.27857 0.00013476 0.029058 1.4058E-05 0.30763 0.00014882 483.774301113942 487.780853954158 80.681 2.0094 80.681 79.879 81.888 0 864 166 8 0 0 0 0.00069603 3 48989 128.75 93.931 1 0.65541 0.77624 0 2659400000 1606400000 1053000000 37132 1140 13971 14353 58337;58338;58339 58338 VFQFLNAK 8 1 0 Unmodified _VFQFLNAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 483.7735 2 483.774003 965.533452 NaN NaN NaN -0.06182 -2.9907E-05 NaN NaN NaN NaN 81.841 1.2822 81.841 81.755 83.037 0 0 0 0 0.001672 1 50276 111.28 77.465 1 NaN NaN 0 34955000 34955000 0 37133 1140 13971 14353 58340 58340 VFQFLNAK 8 1 0 Unmodified _VFQFLNAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.7742 2 483.774003 965.533452 85349.7 0.24385 0.00011797 -0.021464 -1.0384E-05 0.22238 0.00010758 483.774275213132 487.781042503715 93.042 3.6775 93.042 92.63 96.308 -7.6294E-06 1414 242 11 0 0 0 0.00090641 9 51741 125.86 100.12 1 1.3331 1.1774 0 283050000 119590000 163450000 37134 1140 13971 14353 58341;58342;58343;58344;58345;58346;58347;58348;58349 58342 VFQFLNAK 8 1 0 Unmodified _VFQFLNAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 487.7815 2 483.774003 965.533452 88564.23 0.45948 0.00022228 -0.22004 -0.00010645 0.23944 0.00011583 483.773829413506 487.780923461035 96.304 2.0207 96.304 95.962 97.983 0 233 120 4 0 0 0 0.024215 2 54027 56.011 46.797 1 1.2074 0.98741 0 2617000 1092300 1524700 37135 1140 13971 14353 58350;58351 58350 VFQFLNAK 8 1 0 Unmodified _VFQFLNAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.7739 2 483.774003 965.533452 85894.58 0.13116 6.345E-05 0.035995 1.7414E-05 0.16715 8.0864E-05 483.774239763857 487.78106164561 92.916 3.4858 92.916 92.277 95.763 0 1298 224 10 0 0 0 0.0011928 8 50811 111.28 81.619 1 1.3349 1.1575 0 274660000 117770000 156900000 37136 1140 13971 14353 58352;58353;58354;58355;58356;58357;58358;58359 58353 VFQFLNAK 8 1 0 Unmodified _VFQFLNAK_ 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 483.7748 2 483.774003 965.533452 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.884 1 95.884 95.384 96.384 0 0 0 0 0.0087198 1 52947 78.616 49.277 1 37137 1140 13971 14353 58360 58360 VFQGFFTGR 9 0 1 Unmodified _VFQGFFTGR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.7742 2 529.774534 1057.53451 NaN NaN NaN 0.64498 0.0003417 NaN NaN NaN NaN 85.461 0.67371 85.461 85.211 85.884 0 0 0 0 3.4564E-17 1 51296 153.04 131.51 1 NaN NaN 0 75451000 75451000 0 37138 1421 13972 14354 58361 58361 VFQGFFTGR 9 0 1 Unmodified _VFQGFFTGR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.775 2 529.774534 1057.53451 83569.05 0.58888 0.00031197 0.54785 0.00029024 1.1367 0.00060221 529.774639656347 534.778720207555 97.416 1.1062 97.416 96.984 98.091 0 290 66 7 0 0 0 0.04152 1 54637 41.427 41.427 1 1.2355 1.0089 0 15714000 6864200 8849300 37139 1421 13972 14354 58362 58362 VFQGFFTGR 9 0 1 Unmodified _VFQGFFTGR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.7753 2 529.774534 1057.53451 84059.41 0.28149 0.00014913 0.43336 0.00022959 0.71486 0.00037871 529.774559890423 534.778715694512 97.25 0.99118 97.25 96.815 97.806 7.6294E-06 256 51 7 0 0 0 0.007781 1 53729 61.679 61.679 1 1.2914 1.0651 0 14382000 6546000 7836000 37140 1421 13972 14354 58363 58363 VFQSSTSQEQVYNDCAK 17 1 0 Unmodified _VFQSSTSQEQVYNDCAK_ 0 0 0 V9HW29;D3DRX6;P33176;A8K048;M1VRN1;M1VKJ2;M1VE91;C1PHA2;M1V490;M1VPF9;M1V481;M1VPF7;M1VRN0;M1VKI9;M1VE89;Q6P164;Q2TA90;Q66K46 V9HW29 V9HW29 HEL-S-61;KIF5B;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K24;R11;KIF5B-ALK;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020630)_K15;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-RET(NM_020975)_K16;R12 Kinesin-like protein;Kinesin-1 heavy chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1000.4522 2 995.944186 1989.87382 NaN NaN NaN -0.0060072 -5.9829E-06 NaN NaN NaN NaN 41.848 0.27657 41.848 41.695 41.971 0 0 0 0 0.0018751 2 22062 55.261 48.38 1 NaN NaN 0 2305400 0 2305400 37141 1186 13973 14355 58364;58365 58365 VFQTEAELQEVISDLQSK 18 1 0 Unmodified _VFQTEAELQEVISDLQSK_ 0 0 0 Q92878;E7EN38;Q32P42 Q92878 Q92878 RAD50 DNA repair protein RAD50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1032.531 2 1032.52841 2063.04227 60161.67 0.99196 0.0010242 0.36294 0.00037474 1.3549 0.001399 1033.03092570983 1037.03705184313 127.08 0.46405 127.08 126.83 127.29 -7.6294E-06 84 25 5 0 0 0 2.0298E-16 2 82711 123.02 123.02 1 0.7771 0.79011 0 13873000 7762000 6110900 37142 1953 13974 14356 58366;58367 58367 VFQTEAELQEVISDLQSK 18 1 0 Unmodified _VFQTEAELQEVISDLQSK_ 0 0 0 Q92878;E7EN38;Q32P42 Q92878 Q92878 RAD50 DNA repair protein RAD50 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1032.1421 2 1032.52841 2063.04227 60182.63 0.6845 0.00070676 0.5969 0.00061632 1.2814 0.0013231 1032.52884643299 1036.53549121598 126.71 0.6067 126.71 126.35 126.96 0 152 37 8 0 0 0 0.010571 1 84606 58.487 58.487 1 0.81402 0.86156 0 20235000 11020000 9215700 37143 1953 13974 14356 58368 58368 VFSATLGLVDIVK 13 1 0 Unmodified _VFSATLGLVDIVK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.4133 2 681.405578 1360.7966 73352.37 0.72685 0.00049528 0.91684 0.00062474 1.6437 0.00112 681.406757198582 685.412542316921 120.49 1.204 120.49 120.03 121.24 7.6294E-06 515 85 10 0 0 0 6.7586E-09 3 77547 118.4 100.34 1 0.55637 0.6457 0 244370000 153030000 91330000 37144 139 13975 14357 58369;58370;58371 58369 VFSATLGLVDIVK 13 1 0 Unmodified _VFSATLGLVDIVK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 681.4055 2 681.405578 1360.7966 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.31 1 121.31 120.81 121.81 0 0 0 0 0.000862 1 78357 79.659 45.406 1 37145 139 13975 14357 58372 58372 VFSATLGLVDIVK 13 1 0 Unmodified _VFSATLGLVDIVK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 685.4133 2 681.405578 1360.7966 73253.94 0.919 0.00062621 0.70265 0.00047879 1.6217 0.001105 681.406599540294 685.412414131387 119.94 1.3151 119.94 119.49 120.8 0 534 96 10 0 0 0 3.1697E-06 2 79043 108.7 95.105 1 0.56422 0.66203 0 336070000 210430000 125630000 37146 139 13975 14357 58373;58374 58373 VFSATLGLVDIVK 13 1 0 Unmodified _VFSATLGLVDIVK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 685.4121 2 681.405578 1360.7966 NaN NaN NaN -0.5918 -0.00040326 NaN NaN NaN NaN 133.05 1.3708 133.05 132.71 134.08 0 0 0 0 0.004753 2 80840 60.255 46.048 1 NaN NaN 0 37366000 0 37366000 37147 139 13975 14357 58375;58376 58375 VFSATLGLVDIVK 13 1 0 Unmodified _VFSATLGLVDIVK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.4129 2 681.405578 1360.7966 NaN NaN NaN -0.53613 -0.00036532 NaN NaN NaN NaN 132.76 1.2559 132.76 132.46 133.71 0 0 0 0 3.2082E-06 1 79755 103.34 92.97 1 NaN NaN 0 39274000 0 39274000 37148 139 13975 14357 58377 58377 VFSDEVQQQAQLSTIR 16 0 1 Unmodified _VFSDEVQQQAQLSTIR_ 0 0 0 Q8N7H0;B3KNG0;B0QY90;B4DQF6;B3KPB9;B0QY89;Q9Y262;Q7Z5X3 Q8N7H0 Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.9832 2 924.976147 1847.93774 NaN NaN NaN -0.25276 -0.0002338 NaN NaN NaN NaN 80.079 0.31035 80.079 79.897 80.207 0 0 0 0 7.3092E-19 1 47482 128.54 109.8 1 NaN NaN 0 7416100 0 7416100 37149 806 13976 14358 58378 58378 VFSDEVQQQAQLSTIR 16 0 1 Unmodified _VFSDEVQQQAQLSTIR_ 0 0 0 Q8N7H0;B3KNG0;B0QY90;B4DQF6;B3KPB9;B0QY89;Q9Y262;Q7Z5X3 Q8N7H0 Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 930.4821 2 924.976147 1847.93774 NaN NaN NaN 0.2364 0.00021867 NaN NaN NaN NaN 79.14 0.30286 79.14 78.962 79.265 0 0 0 0 3.9387E-06 2 48112 80.69 72.558 1 NaN NaN 0 4793400 0 4793400 37150 806 13976 14358 58379;58380 58380 VFSGLVSTGLK 11 1 0 Unmodified _VFSGLVSTGLK_ 0 0 0 P13639;Q8TA90;Q6PK56;B4DRE8 P13639 P13639 EEF2 Elongation factor 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.3312 2 554.324057 1106.63356 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.619 1 82.619 82.119 83.119 0 0 0 0 0.00033611 1 50578 78.098 61.322 1 37151 1478 13977 14359 58381 58381 VFSIGPVFR 9 0 1 Unmodified _VFSIGPVFR_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.299 2 511.295102 1020.57565 85347.45 0.58961 0.00030147 0.2289 0.00011703 0.81851 0.0004185 511.294982891875 516.299175033171 103.51 0.7485 103.51 103.13 103.87 -7.6294E-06 252 60 6 0 0 0 0.0016482 2 63741 82.671 61.972 1 1.5886 1.6528 0 38156000 12336000 25820000 37152 610 13978 14360 58382;58383 58383 VFSIGPVFR 9 0 1 Unmodified _VFSIGPVFR_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.2991 2 511.295102 1020.57565 85828.98 0.7796 0.00039861 0.075773 3.8743E-05 0.85538 0.00043735 511.294966722958 516.299154054004 102.71 0.79302 102.71 102.27 103.06 0 276 62 6 0 0 0 0.0044628 3 64649 75.854 62.079 1 1.6219 1.8053 0 43555000 18630000 24925000 37153 610 13978 14360 58384;58385;58386 58385 VFSIGPVFR 9 0 1 Unmodified _VFSIGPVFR_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.2996 2 511.295102 1020.57565 86871.53 0.84618 0.00043265 0.094038 4.8081E-05 0.94021 0.00048073 511.295068241215 516.299300750577 115.4 0.56203 115.4 115.16 115.73 0 100 26 5 0 0 0 0.03089 1 67540 45.68 34.312 1 0.73344 0.62037 0 2968900 1488200 1480700 37154 610 13978 14360 58387 58387 VFSIGPVFR 9 0 1 Unmodified _VFSIGPVFR_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.2947 2 511.295102 1020.57565 84902.66 0.50403 0.00025771 0.50043 0.00025587 1.0045 0.00051357 511.295388287385 516.299374564031 115.19 0.5745 115.19 114.95 115.52 0 109 27 6 0 0 0 0.026085 2 66447 55.676 55.676 1 0.7981 0.68876 0 2735400 1603100 1132300 37155 610 13978 14360 58388;58389 58389 VFSLLQK 7 1 0 Unmodified _VFSLLQK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.7581 2 417.757821 833.501089 95720.9 -0.13236 -5.5293E-05 0.33922 0.00014171 0.20686 8.6417E-05 417.75789485877 421.765023218854 71.953 0.48051 71.953 71.777 72.258 0 175 43 6 0 0 0 0.011987 2 43137 106.85 49.393 1 1.0659 1.1916 0 104270000 50722000 53551000 37156 897 13979 14361 58390;58391 58391 VFSLLQK 7 1 0 Unmodified _VFSLLQK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 421.7652 2 417.757821 833.501089 94954.5 -0.32467 -0.00013563 0.76031 0.00031762 0.43564 0.00018199 417.758054770008 421.765189900098 83.792 0.46332 83.792 83.559 84.023 0 153 36 6 0 0 0 0.058932 1 45653 50.966 15.86 1 1.1667 0.91092 0 11998000 5891500 6106300 37157 897 13979 14361 58392 58392 VFSLLQK 7 1 0 Unmodified _VFSLLQK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A2VDI1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 421.765 2 417.757821 833.501089 96034.38 -0.16408 -6.8547E-05 0.72008 0.00030082 0.556 0.00023227 417.757992592413 421.765113490499 83.83 0.46836 83.83 83.637 84.105 -7.6294E-06 158 38 6 0 0 0 0.028783 1 44912 71.378 34.349 1 1.1941 0.98437 0 10857000 4792600 6064300 37158 897 13979 14361 58393 58393 VFSLSSEFK 9 1 0 Unmodified _VFSLSSEFK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.2811 2 522.274032 1042.53351 NaN NaN NaN -0.49164 -0.00025677 NaN NaN NaN NaN 84.493 0.82507 84.493 84.147 84.972 -7.6294E-06 0 0 0 3.8853E-06 1 50614 117.04 88.818 1 NaN NaN 0 42720000 0 42720000 37159 1411 13980 14362 58394 58394 VFSLSSEFK 9 1 0 Unmodified _VFSLSSEFK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.2739 2 522.274032 1042.53351 85185.53 0.57427 0.00029992 0.19465 0.00010166 0.76891 0.00040158 522.274098037811 526.281183896257 83.379 0.79433 83.379 83.051 83.846 0 224 60 7 0 0 0 0.00028235 2 51047 103.56 72.334 1 0.93211 1.0415 0 92966000 48894000 44073000 37160 1411 13980 14362 58395;58396 58396 VFSLSSEFK 9 1 0 Unmodified _VFSLSSEFK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.2739 2 522.274032 1042.53351 83672.27 0.16768 8.7573E-05 -0.046069 -2.4061E-05 0.12161 6.3512E-05 522.274229500421 526.28098764646 96.78 0.94335 96.78 96.449 97.392 0 149 46 5 0 0 0 0.002701 1 53515 73.665 58.003 1 0.92621 0.75615 0 4699400 2560000 2139400 37161 1411 13980 14362 58397 58397 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.5613 3 456.561597 1366.66296 NaN NaN NaN -0.609 -0.00027805 NaN NaN NaN NaN 53.101 0.33818 53.101 52.965 53.303 0 0 0 0 0.0011057 1 29615 47.037 36.684 1 NaN NaN 0 22761000 22761000 0 + 37162 1163 13981 14363 58398 58398 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3394 2 684.338758 1366.66296 NaN NaN NaN 0.23464 0.00016057 NaN NaN NaN NaN 59.484 1.852 59.484 59.327 61.179 0 0 0 0 1.0867E-31 2 33831 153.54 123.73 1 NaN NaN 0 14884000000 14884000000 0 + 37163 1163 13981 14363 58399;58400 58399 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.339 2 684.338758 1366.66296 NaN NaN NaN 0.91671 0.00062734 NaN NaN NaN NaN 68.222 0.70348 68.222 67.908 68.612 0 0 0 0 0.011578 1 39725 51.013 31.236 1 NaN NaN 0 11553000 11553000 0 + 37164 1163 13981 14363 58401 58401 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3391 2 684.338758 1366.66296 NaN NaN NaN 0.44345 0.00030347 NaN NaN NaN NaN 69.037 1.1936 69.037 68.592 69.785 0 0 0 0 0.005134 1 40422 56.225 31.449 1 NaN NaN 0 19222000 19222000 0 + 37165 1163 13981 14363 58402 58402 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3391 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.29 1 65.29 64.79 65.79 0 0 0 0 0.0086247 1 37592 52.735 31.207 1 + 37166 1163 13981 14363 58403 58403 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3389 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.045 1 66.045 65.545 66.545 0 0 0 0 0.0024822 1 38076 62.694 41.747 1 + 37167 1163 13981 14363 58404 58404 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.34 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.328 1 70.328 69.828 70.828 0 0 0 0 0.0021626 1 40911 65.842 40.919 1 + 37168 1163 13981 14363 58405 58405 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3379 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.131 1 73.131 72.631 73.631 7.6294E-06 0 0 0 0.0025113 1 42911 62.408 42.621 1 + 37169 1163 13981 14363 58406 58406 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3392 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.041 1 74.041 73.541 74.541 0 0 0 0 0.017888 1 43432 45.077 24.176 1 + 37170 1163 13981 14363 58407 58407 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3389 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.714 1 76.714 76.214 77.214 0 0 0 0 0.051932 1 45254 40.154 27.627 1 + 37171 1163 13981 14363 58408 58408 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3345 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.743 1 76.743 76.243 77.243 0 0 0 0 0.018167 1 45277 44.847 33.626 1 + 37172 1163 13981 14363 58409 58409 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 684.3389 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 141.83 1 141.83 141.33 142.33 0 0 0 0 0.043645 1 90368 41.283 24.507 1 + 37173 1163 13981 14363 58410 58410 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3416 2 684.338758 1366.66296 NaN NaN NaN -0.30044 -0.0002056 NaN NaN NaN NaN 42.422 0.18613 42.422 42.314 42.5 0 0 0 0 0.0029928 1 22889 63.727 42.825 1 NaN NaN 0 3713500 3713500 0 + 37174 1163 13981 14363 58411 58411 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3405 2 684.338758 1366.66296 NaN NaN NaN 0.98401 0.0006734 NaN NaN NaN NaN 58.304 2.2796 58.304 58.129 60.409 0 0 0 0 1.7235E-31 1 33824 151.98 119.76 1 NaN NaN 0 18692000000 18692000000 0 + 37175 1163 13981 14363 58412 58412 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3397 2 684.338758 1366.66296 NaN NaN NaN 0.47626 0.00032592 NaN NaN NaN NaN 63.881 1.5109 63.881 63.485 64.996 3.8147E-06 0 0 0 0.00021535 2 38150 84.605 63.077 1 NaN NaN 0 22770000 22770000 0 + 37176 1163 13981 14363 58413;58414 58414 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3392 2 684.338758 1366.66296 NaN NaN NaN 0.14136 9.674E-05 NaN NaN NaN NaN 66.145 2.5277 66.145 64.996 67.523 0 0 0 0 9.8891E-05 3 39168 89.301 70.628 1 NaN NaN 0 22160000 22160000 0 + 37177 1163 13981 14363 58415;58416;58417 58416 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3397 2 684.338758 1366.66296 NaN NaN NaN -0.33067 -0.00022629 NaN NaN NaN NaN 70.171 1.1767 70.171 70.074 71.251 0 0 0 0 0.0082904 1 42305 53.237 34.457 1 NaN NaN 0 11076000 11076000 0 + 37178 1163 13981 14363 58418 58418 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3391 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.282 1 69.282 68.782 69.782 0 0 0 0 0.002208 1 41231 65.395 44.494 1 + 37179 1163 13981 14363 58419 58419 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3386 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.014 1 72.014 71.514 72.514 0 0 0 0 0.0086763 1 43216 52.693 33.913 1 + 37180 1163 13981 14363 58420 58420 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3398 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.395 1 85.395 84.895 85.895 0 0 0 0 0.032201 1 52541 42.843 25.612 1 + 37181 1163 13981 14363 58421 58421 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3412 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.19 1 100.19 99.69 100.69 0 0 0 0 0.01159 1 62916 50.284 29.382 1 + 37182 1163 13981 14363 58422 58422 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.339 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.12 1 102.12 101.62 102.62 0 0 0 0 0.0096028 1 64406 51.927 31.025 1 + 37183 1163 13981 14363 58423 58423 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3385 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 141.92 1 141.92 141.42 142.42 0 0 0 0 0.032932 1 91973 42.743 21.237 1 + 37184 1163 13981 14363 58424 58424 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.8545 2 684.338758 1366.66296 74775.84 0.80437 0.00055046 0.82419 0.00056402 1.6286 0.0011145 684.33829100054 689.343862315362 72.955 0.66503 72.955 72.614 73.279 0 151 55 5 0 0 0 0.010593 1 43764 57.019 57.019 1 2.0598 2.0579 0 16856000 6354700 10501000 + 37185 1163 13981 14363 58425 58425 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.8406 2 684.338758 1366.66296 NaN NaN NaN -0.07459 -5.1045E-05 NaN NaN NaN NaN 69.125 3.0429 69.125 68.824 71.867 0 0 0 0 0.000239 1 36081 83.652 51.431 1 NaN NaN 0 1225800000 1225800000 0 + 37186 1163 13981 14363 58426 58426 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.3398 2 684.338758 1366.66296 NaN NaN NaN 0.82998 0.00056798 NaN NaN NaN NaN 73.177 5.1172 73.177 72.493 77.611 0 0 0 0 0.046905 1 41165 39.148 26.922 1 NaN NaN 0 6701300 6701300 0 + 37187 1163 13981 14363 58427 58427 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.3391 2 684.338758 1366.66296 NaN NaN NaN 0.74263 0.00050821 NaN NaN NaN NaN 78.458 1.13 78.458 77.911 79.041 0 0 0 0 0.050358 1 42383 38.634 26.107 1 NaN NaN 0 1939800 1939800 0 + 37188 1163 13981 14363 58428 58428 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.339 2 684.338758 1366.66296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.048 1 78.048 77.548 78.548 0 0 0 0 0.053671 1 41853 39.917 25.914 1 + 37189 1163 13981 14363 58429 58429 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.339 2 684.338758 1366.66296 NaN NaN NaN 0.50558 0.00034599 NaN NaN NaN NaN 69.696 2.8594 69.696 69.27 72.129 0 0 0 0 0.0029928 1 35625 63.727 37.833 1 NaN NaN 0 948970000 948970000 0 + 37190 1163 13981 14363 58430 58430 VFTTQELVQAFTHAPATLEADR 22 0 1 Unmodified _VFTTQELVQAFTHAPATLEADR_ 0 0 0 H0YJ63;G3V438;H0YJG7;O95433 H0YJ63 H0YJ63 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.0888 3 815.751806 2444.23359 68408.13 0.85163 0.00069472 0.40222 0.00032811 1.2539 0.0010228 816.086310190119 819.422391372258 123.62 0.61907 123.62 123.41 124.03 0 145 43 6 0 0 0 1.6798E-07 1 82123 54.008 54.008 1 2.3757 2.388 0 9273700 3650400 5623300 37191 1273 13982 14364 58431 58431 VFTTVGSAEK 10 1 0 Unmodified _VFTTVGSAEK_ 0 0 0 A0A0U1RQF0;P49327;Q6PJJ3 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.7766 2 519.776939 1037.53933 NaN NaN NaN 0.25046 0.00013019 NaN NaN NaN NaN 34.139 0.60606 34.139 33.823 34.43 3.8147E-06 0 0 0 0.015795 1 17040 66.692 23.446 1 NaN NaN 0 6851300 6851300 0 37192 587 13983 14365 58432 58432 VFVEDDENSSQK 12 1 0 Unmodified _VFVEDDENSSQK_ 0 0 0 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.8167 2 698.814978 1395.6154 74888.55 0.62135 0.00043421 0.46021 0.0003216 1.0816 0.00075581 698.815376496888 702.822051681879 27.965 0.25841 27.965 27.818 28.076 1.9073E-06 55 15 5 0 0 0 0.00024208 2 13164 87.298 87.298 1 0.61978 0.63922 0 11517000 6200200 5316500 37193 2109 13984 14366 58433;58434 58433 VFVGGLSPDTSEEQIK 16 1 0 Unmodified _VFVGGLSPDTSEEQIK_ 0 0 0 B4DTA2;A0A087WUK2;A0A024RDF6;O14979 B4DTA2 B4DTA2 HNRNPDL;HNRPDL Heterogeneous nuclear ribonucleoprotein D-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.4429 2 853.435792 1704.85703 67663.23 1.3928 0.0011887 -0.56107 -0.00047884 0.83178 0.00070987 853.935959095144 857.442563745574 84.221 0.58163 84.221 83.908 84.489 0 135 45 5 0 0 0 0.00015226 1 50400 65.395 65.395 1 3.2017 3.2904 0 28714000 9023400 19691000 37194 385 13985 14367 58435 58435 VFVGGLSPDTSEEQIK 16 1 0 Unmodified _VFVGGLSPDTSEEQIK_ 0 0 0 B4DTA2;A0A087WUK2;A0A024RDF6;O14979 B4DTA2 B4DTA2 HNRNPDL;HNRPDL Heterogeneous nuclear ribonucleoprotein D-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.444 2 853.435792 1704.85703 67373.58 0.77143 0.00065837 -0.20701 -0.00017667 0.56442 0.0004817 853.43638280451 857.442823481007 83.278 0.68796 83.278 82.951 83.638 0 133 51 5 0 0 0 4.6387E-12 2 51007 116.03 116.03 1 3.8437 4.0594 0 23663000 5247500 18416000 37195 385 13985 14367 58436;58437 58437 VFVGGLSPDTSEEQIK 16 1 0 Unmodified _VFVGGLSPDTSEEQIK_ 0 0 0 B4DTA2;A0A087WUK2;A0A024RDF6;O14979 B4DTA2 B4DTA2 HNRNPDL;HNRPDL Heterogeneous nuclear ribonucleoprotein D-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 853.4379 2 853.435792 1704.85703 68249.09 0.89608 0.00076474 0.19688 0.00016802 1.093 0.00093277 853.436612100748 857.944390336107 96.426 0.51816 96.426 96.129 96.647 0 126 31 5 0 0 0 0.015713 1 54080 30.828 30.828 1 1.786 1.3964 0 3238400 1073800 2164600 37196 385 13985 14367 58438 58438 VFVGGLSPDTSEEQIK 16 1 0 Unmodified _VFVGGLSPDTSEEQIK_ 0 0 0 B4DTA2;A0A087WUK2;A0A024RDF6;O14979 B4DTA2 B4DTA2 HNRNPDL;HNRPDL Heterogeneous nuclear ribonucleoprotein D-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 853.9404 2 853.435792 1704.85703 68055.83 0.47862 0.00040847 0.28947 0.00024705 0.76809 0.00065552 853.937726337382 857.44302511996 96.249 0.59842 96.249 95.973 96.571 0 126 36 5 0 0 0 0.0046479 1 53192 36.284 36.284 1 1.8532 1.4458 0 3462700 1245500 2217100 37197 385 13985 14367 58439 58439 VFVLDEADVMIATQGHQDQSIR 22 0 1 Oxidation (M) _VFVLDEADVM(ox)IATQGHQDQSIR_ VFVLDEADVM(1)IATQGHQDQSIR VFVLDEADVM(80.24)IATQGHQDQSIR 0 1 0 I3L0H8;Q2NL95;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24;Q9HBZ9;Q7Z4W5;H3BN59 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 833.415 3 830.076072 2487.20639 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.512 1 98.512 98.012 99.012 0 0 0 0 2.2294E-09 1 60221 80.236 65.466 1 37198 593 13986 14368 58440 58440 453 VFWDPSVNLFGHVGSTTASR 20 0 1 Unmodified _VFWDPSVNLFGHVGSTTASR_ 0 0 0 A8K2R3;O60341;R4GMP9 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.0343 3 726.363994 2176.07015 NaN NaN NaN -0.33503 -0.00024335 NaN NaN NaN NaN 124.56 0.49088 124.56 124.39 124.88 0 0 0 0 0.0087232 1 74641 30.094 20.93 1 NaN NaN 0 2308400 0 2308400 37199 711 13987 14369 58441 58441 VFWDPSVNLFGHVGSTTASR 20 0 1 Unmodified _VFWDPSVNLFGHVGSTTASR_ 0 0 0 A8K2R3;O60341;R4GMP9 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.035 3 726.363994 2176.07015 NaN NaN NaN -0.29718 -0.00021586 NaN NaN NaN NaN 124.31 0.38163 124.31 124.15 124.53 0 0 0 0 0.052333 1 73592 22.375 17.665 1 NaN NaN 0 1523800 0 1523800 37200 711 13987 14369 58442 58442 VFYTGQVVK 9 1 0 Unmodified _VFYTGQVVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.8006 2 520.792392 1039.57023 85583.4 0.55393 0.00028848 0.13712 7.141E-05 0.69104 0.00035989 520.792392407873 524.799502488548 55.832 0.59214 55.832 55.583 56.175 0 202 43 6 0 0 0 0.0060214 2 31322 65.246 58.797 1 1.2005 1.3524 0 74698000 36435000 38263000 37201 1741 13988 14370 58443;58444 58443 VFYTGQVVK 9 1 0 Unmodified _VFYTGQVVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.7991 2 520.792392 1039.57023 85631.67 0.35903 0.00018698 -0.0048818 -2.5424E-06 0.35415 0.00018444 520.792288189464 524.799382433861 54.797 0.64111 54.797 54.5 55.141 0 246 54 6 0 0 0 0.002013 2 31257 77.923 77.923 1 1.1215 1.2655 0 64059000 28066000 35992000 37202 1741 13988 14370 58445;58446 58445 VFYTGQVVK 9 1 0 Unmodified _VFYTGQVVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.7993 2 520.792392 1039.57023 84591.43 0.29105 0.00015158 -0.066099 -3.4424E-05 0.22496 0.00011715 520.791971680901 524.79947428117 64.902 0.88235 64.902 64.539 65.421 0 266 62 6 0 0 0 0.020055 1 33509 50.607 50.607 1 1.3468 1.049 0 12304000 5701600 6602000 37203 1741 13988 14370 58447 58447 VFYTGQVVK 9 1 0 Unmodified _VFYTGQVVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 524.7994 2 520.792392 1039.57023 84682.82 0.11961 6.229E-05 0.080971 4.2169E-05 0.20058 0.00010446 520.79200985132 524.799535903808 65.281 1.0347 65.281 64.805 65.84 0 252 67 7 0 0 0 0.017217 1 32872 53.166 47.127 1 1.3106 1.0791 0 10459000 3858700 6600100 37204 1741 13988 14370 58448 58448 VFYYLVQDLK 10 1 0 Unmodified _VFYYLVQDLK_ 0 0 0 F5H6P7;A0A023T6R1;P61326;Q96A72 F5H6P7 F5H6P7 MAGOHB;FLJ10292;MAGOH Protein mago nashi homolog;Protein mago nashi homolog 2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.8798 2 644.352814 1286.69108 79580.65 0.82774 0.00053336 0.16769 0.00010805 0.99543 0.00064141 644.352644128528 648.360088309335 107.61 0.74398 107.61 107.26 108 0 165 52 5 0 0 0 0.051358 1 68517 67.507 60.135 1 1.5881 1.6419 0 9729600 4075100 5654400 37205 3 13989 14371 58449 58449 VGAEELTADQNLK 13 1 0 Unmodified _VGAEELTADQNLK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 694.3567 2 694.356813 1386.69907 71760.84 0.84586 0.00058733 -0.26101 -0.00018123 0.58486 0.0004061 694.356649401921 698.363723088682 54.308 0.56756 54.308 54.106 54.673 0 248 48 7 0 0 0 2.0354E-74 2 30479 215.83 179.4 1 1.0039 1.1404 0 162870000 82540000 80331000 37206 1618 13990 14372 58450;58451 58451 VGAEELTADQNLK 13 1 0 Unmodified _VGAEELTADQNLK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.3639 2 694.356813 1386.69907 73554.91 0.59133 0.0004106 -0.24685 -0.0001714 0.34449 0.0002392 694.356431328587 698.36371582702 53.539 0.74299 53.539 53.14 53.883 0 384 66 8 0 0 0 5.2956E-39 2 30533 185.08 159.46 1 1.0021 1.1197 0 91200000 43602000 47598000 37207 1618 13990 14372 58452;58453 58453 VGAEELTADQNLK 13 1 0 Unmodified _VGAEELTADQNLK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 698.3636 2 694.356813 1386.69907 71524.95 0.2011 0.00013963 -0.072897 -5.0616E-05 0.1282 8.9016E-05 694.356794937975 698.363996870287 63.512 0.97812 63.512 63.025 64.003 0 443 86 9 0 0 0 2.3454E-13 2 32635 127.93 110.9 1 1.1885 0.96967 0 32714000 14620000 18095000 37208 1618 13990 14372 58454;58455 58454 VGAEELTADQNLK 13 1 0 Unmodified _VGAEELTADQNLK_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;Q96J73 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 694.3559 2 694.356813 1386.69907 70268.67 0.25919 0.00017997 -0.066708 -4.6319E-05 0.19249 0.00013365 694.356624142519 698.363809253202 64.227 0.83974 64.227 63.775 64.615 0 350 55 8 0 0 0 7.1128E-20 2 32307 149.96 118.46 1 1.2489 1.0284 0 28812000 12967000 15845000 37209 1618 13990 14372 58456;58457 58456 VGAPLICCEIK 11 1 0 Unmodified _VGAPLICCEIK_ 0 0 0 Q8TAF6;O60488;B4DH39;H0Y9A0 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3358 2 630.327959 1258.64136 78110.66 0.76632 0.00048303 -0.077962 -4.9142E-05 0.68836 0.00043389 630.328286260315 634.33490147057 77.823 0.43768 77.823 77.575 78.013 0 130 37 6 0 0 0 0.0033898 1 47103 59.908 47.671 1 1.2562 1.2901 0 9489200 4467800 5021400 37210 1394 13991 14373 58458 58458 VGAPLVCCEIK 11 1 0 Unmodified _VGAPLVCCEIK_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573;B3KMA6 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.8218 2 623.320134 1244.62571 78489.61 0.47052 0.00029328 0.084333 5.2567E-05 0.55485 0.00034585 623.32014759892 627.327726257975 69.561 0.53957 69.561 69.194 69.733 0 120 44 6 0 0 0 0.0070376 2 40399 53.327 42.498 1 1.2406 1.2606 0 13752000 7155900 6596300 37211 150 13992 14374 58459;58460 58459 VGDAIPAVEVFEGEPGNK 18 1 0 Unmodified _VGDAIPAVEVFEGEPGNK_ 0 0 0 V9HW35;P30044 V9HW35 V9HW35 HEL-S-55;PRDX5 Peroxiredoxin-5, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.4672 2 914.459798 1826.90504 NaN NaN NaN 1.0775 0.00098529 NaN NaN NaN NaN 105.33 0.50815 105.33 105.12 105.63 0 0 0 0 0.00071626 1 66964 55.314 44.408 1 NaN NaN 0 11853000 0 11853000 37212 1529 13993 14375 58461 58461 VGDDVEFEVSSDR 13 0 1 Unmodified _VGDDVEFEVSSDR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLD4 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.3301 2 727.32571 1452.63687 NaN NaN NaN 0.10577 7.6927E-05 NaN NaN NaN NaN 64.851 0.57136 64.851 64.64 65.212 0 0 0 0 5.139E-06 1 37347 101.93 85.297 1 NaN NaN 0 9135500 0 9135500 37213 42 13994 14376 58462 58462 VGDDVEFEVSSDR 13 0 1 Unmodified _VGDDVEFEVSSDR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLD4 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.3301 2 727.32571 1452.63687 NaN NaN NaN 0.40157 0.00029207 NaN NaN NaN NaN 64.032 0.61184 64.032 63.613 64.225 0 0 0 0 3.5614E-06 1 37653 103.08 86.451 1 NaN NaN 0 7118700 0 7118700 37214 42 13994 14376 58463 58463 VGDDVEFEVSSDRR 14 0 2 Unmodified _VGDDVEFEVSSDRR_ 0 0 1 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLD4 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.9257 3 537.253269 1608.73798 81111.77 0.90448 0.00048594 0.32833 0.0001764 1.2328 0.00066233 537.253344537896 543.925441447537 49.379 0.45847 49.379 49.171 49.629 -3.8147E-06 128 29 8 0 0 0 0.0019182 2 27039 40.025 40.025 1 2.9754 3.2403 0 81322000 22400000 58922000 37215 42 13995 14377 58464;58465 58464 VGDDVEFEVSSDRR 14 0 2 Unmodified _VGDDVEFEVSSDRR_ 0 0 1 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLD4 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.3857 2 805.376266 1608.73798 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.321 1 49.321 48.821 49.821 0 0 0 0 0.001599 1 27061 82.417 58.073 1 37216 42 13995 14377 58466 58466 VGDDVEFEVSSDRR 14 0 2 Unmodified _VGDDVEFEVSSDRR_ 0 0 1 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLD4 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.9261 3 537.253269 1608.73798 81790.63 0.75753 0.00040698 0.030376 1.632E-05 0.7879 0.0004233 537.588197213423 543.925353620238 48.21 0.89252 48.21 47.749 48.642 0 191 61 5 0 0 0 0.012798 1 26799 25.178 25.178 1 2.45 2.7998 0 44889000 24898000 19991000 37217 42 13995 14377 58467 58467 VGDFVATDLDTGRPSTTVR 19 0 2 Unmodified _VGDFVATDLDTGRPSTTVR_ 0 0 1 Q02413 Q02413 Q02413 DSG1 Desmoglein-1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.0109 3 669.676237 2006.00688 NaN NaN NaN 0.17829 0.0001194 NaN NaN NaN NaN 85.374 0.45411 85.374 85.179 85.633 0 0 0 0 0.0024171 1 45862 48.112 31.618 1 NaN NaN 0 3012200 3012200 0 37218 1678 13996 14378 58468 58468 VGDGDLSAEEIPENEVSLR 19 0 1 Unmodified _VGDGDLSAEEIPENEVSLR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1020.4952 2 1014.98965 2027.96474 61300.09 0.63147 0.00064094 0.0092071 9.3452E-06 0.64068 0.00065028 1015.49104149029 1020.49528328172 92.191 0.57445 92.191 91.926 92.501 7.6294E-06 283 55 7 0 0 0 3.825E-06 4 55763 82.069 66.128 1 1.08 1.1036 0 31270000 14594000 16676000 37219 1740 13997 14379 58469;58470;58471;58472 58470 VGDGDLSAEEIPENEVSLR 19 0 1 Unmodified _VGDGDLSAEEIPENEVSLR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1014.9894 2 1014.98965 2027.96474 61278.66 0.57488 0.0005835 0.17187 0.00017444 0.74675 0.00075794 1014.98967917781 1019.99408895294 91.62 0.52384 91.62 91.373 91.897 0 221 45 7 0 0 0 1.4305E-05 2 56622 68.277 60.907 1 1.1078 1.2448 0 45907000 24577000 21330000 37220 1740 13997 14379 58473;58474 58474 VGDGDLSAEEIPENEVSLR 19 0 1 Unmodified _VGDGDLSAEEIPENEVSLR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1020.4957 2 1014.98965 2027.96474 60444.1 0.38801 0.00039383 0.10614 0.00010773 0.49416 0.00050157 1015.49127269338 1019.99394384096 105.75 0.46163 105.75 105.56 106.02 0 169 25 8 0 0 0 1.509E-12 2 60413 110.51 105.62 1 1.5893 1.3066 0 17640000 6377900 11262000 37221 1740 13997 14379 58475;58476 58476 VGDGDLSAEEIPENEVSLR 19 0 1 Unmodified _VGDGDLSAEEIPENEVSLR_ 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1020.4955 2 1014.98965 2027.96474 60261.21 0.31512 0.00031984 0.14588 0.00014807 0.461 0.00046791 1014.98979706298 1020.4953261666 105.65 0.53282 105.65 105.41 105.94 0 228 36 9 0 0 0 2.1564E-05 1 59412 60.937 56.046 1 1.5051 1.2659 0 17249000 6678000 10571000 37222 1740 13997 14379 58477 58477 VGDGDLSAEEIPENEVSLRR 20 0 2 Unmodified _VGDGDLSAEEIPENEVSLRR_ 0 0 1 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.0363 3 729.029228 2184.06585 69633.99 0.551 0.00040169 0.025369 1.8495E-05 0.57637 0.00042019 729.363907075084 735.701430276417 89.876 0.53447 89.876 89.616 90.15 0 213 35 9 0 0 0 2.9277E-07 2 49695 69.763 69.763 1 1.5099 1.2711 0 11361000 4626900 6733700 37223 1740 13998 14380 58478;58479 58478 VGDGDLSAEEIPENEVSLRR 20 0 2 Unmodified _VGDGDLSAEEIPENEVSLRR_ 0 0 1 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 729.3637 3 729.029228 2184.06585 69935.02 0.43239 0.00031522 0.0030375 2.2145E-06 0.43542 0.00031744 729.363353992371 735.701610486706 89.75 0.50749 89.75 89.517 90.024 0 216 31 10 0 0 0 4.5429E-05 2 48796 44.816 44.816 1 1.5797 1.4463 0 10256000 3880800 6374700 37224 1740 13998 14380 58480;58481 58481 VGDGVYLPPEAFTFNIK 17 1 0 Unmodified _VGDGVYLPPEAFTFNIK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 934.4889 2 933.985452 1865.95635 62600.53 0.72407 0.00067627 0.34235 0.00031975 1.0664 0.00099602 934.487100126101 938.494053244895 124 0.60802 124 123.7 124.31 7.6294E-06 205 42 7 0 0 0 6.8077E-05 3 80411 71.806 65.858 1 0.62039 0.66022 0 15905000 9347400 6557600 37225 222 13999 14381 58482;58483;58484 58483 VGDGVYLPPEAFTFNIK 17 1 0 Unmodified _VGDGVYLPPEAFTFNIK_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 934.4882 2 933.985452 1865.95635 62728.47 0.7219 0.00067424 0.44181 0.00041265 1.1637 0.0010869 933.985805566163 938.494389377705 123.63 0.59378 123.63 123.34 123.93 -7.6294E-06 222 41 8 0 0 0 0.0013589 1 82056 41.401 35.741 1 0.54157 0.56353 0 19006000 12433000 6572900 37226 222 13999 14381 58485 58485 VGDTSLDPNDFDFTVTGR 18 0 1 Unmodified _VGDTSLDPNDFDFTVTGR_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;A0A075BPP5 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.9548 2 978.452701 1954.89085 NaN NaN NaN 0.068935 6.745E-05 NaN NaN NaN NaN 109.46 0.43477 109.46 109.22 109.66 0 0 0 0 0.020876 1 68437 37.998 32.153 1 NaN NaN 0 8183900 8183900 0 37227 623 14000 14382 58486 58486 VGDTSLDPNDFDFTVTGR 18 0 1 Unmodified _VGDTSLDPNDFDFTVTGR_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;A0A075BPP5 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 978.4559 2 978.452701 1954.89085 NaN NaN NaN -0.03221 -3.1516E-05 NaN NaN NaN NaN 109.01 0.38503 109.01 108.77 109.16 0 0 0 0 0.0038089 1 69796 48.659 43.053 1 NaN NaN 0 8672900 8672900 0 37228 623 14000 14382 58487 58487 VGDTSLDPNDFDFTVTGR 18 0 1 Unmodified _VGDTSLDPNDFDFTVTGR_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;A0A075BPP5 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 983.959 2 978.452701 1954.89085 62232.75 0.066919 6.5477E-05 0.15622 0.00015285 0.22314 0.00021833 978.452081547455 983.456797009451 120.43 0.58249 120.43 120.13 120.72 0 141 26 9 0 0 0 0.0023084 2 71464 35.891 35.673 1 0.69168 0.59545 0 7326400 4328100 2998300 37229 623 14000 14382 58488;58489 58489 VGDVTPQVK 9 1 0 Unmodified _VGDVTPQVK_ 0 0 0 E7ETY2;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.7735 2 471.766374 941.518196 91195.61 0.3571 0.00016847 -0.077109 -3.6377E-05 0.27999 0.00013209 471.766164574501 475.773532406866 29.118 0.20157 29.118 29.003 29.205 0 45 10 7 0 0 0 0.0034791 1 14052 71.692 50.244 1 0.62985 0.67975 0 41892000 26500000 15392000 37230 1712;1225 14001 14383 58490 58490 VGDVTPQVK 9 1 0 Unmodified _VGDVTPQVK_ 0 0 0 E7ETY2;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.7736 2 471.766374 941.518196 92515.06 0.26616 0.00012556 -0.44241 -0.00020871 -0.17625 -8.3151E-05 471.765708092922 475.77357270185 28.369 0.31726 28.369 28.203 28.52 1.9073E-06 74 20 5 0 0 0 0.00085417 1 13529 93.429 59.34 1 0.62979 0.63289 0 27295000 14525000 12770000 37231 1712;1225 14001 14383 58491 58491 VGDVTPQVK 9 1 0 Unmodified _VGDVTPQVK_ 0 0 0 E7ETY2;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 475.7737 2 471.766374 941.518196 93979.28 0.21395 0.00010093 -0.64736 -0.0003054 -0.43341 -0.00020447 471.765768505773 475.773302118221 32.926 0.24697 32.926 32.787 33.034 0 34 10 5 0 0 0 0.01379 1 13871 56.258 29.004 1 1.5978 1.2541 0 3817900 1549400 2268500 37232 1712;1225 14001 14383 58492 58492 VGDVYIPR 8 0 1 Unmodified _VGDVYIPR_ 0 0 0 A0A024R3A8;Q9BRL6;J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7;B3KUY1 A0A024R3A8;J3QL05 J3QL05 SRP46;SRSF8;SRSF2;SFRS2 Serine/arginine-rich splicing factor 8;Serine/arginine-rich splicing factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.7597 2 459.75581 917.497067 88681.12 0.35352 0.00016253 -0.15498 -7.1254E-05 0.19854 9.1278E-05 459.755647309714 464.75976899715 57.526 0.69676 57.526 57.156 57.853 0 260 52 7 0 0 0 0.0088018 2 32339 77.058 29.189 1 1.3323 1.5122 0 109240000 49539000 59705000 37233 258;133 14002 14384 58493;58494 58493 VGDVYIPR 8 0 1 Unmodified _VGDVYIPR_ 0 0 0 A0A024R3A8;Q9BRL6;J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7;B3KUY1 A0A024R3A8;J3QL05 J3QL05 SRP46;SRSF8;SRSF2;SFRS2 Serine/arginine-rich splicing factor 8;Serine/arginine-rich splicing factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.7597 2 459.75581 917.497067 89370.13 0.14686 6.752E-05 -0.011707 -5.3822E-06 0.13515 6.2138E-05 459.755640574348 464.759740521926 56.438 0.73689 56.438 56.104 56.84 0 303 54 8 0 0 0 0.012693 2 32350 67.032 26.929 1 1.1963 1.3625 0 107050000 46479000 60574000 37234 258;133 14002 14384 58495;58496 58495 VGDVYIPR 8 0 1 Unmodified _VGDVYIPR_ 0 0 0 A0A024R3A8;Q9BRL6;J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7;B3KUY1 A0A024R3A8;J3QL05 J3QL05 SRP46;SRSF8;SRSF2;SFRS2 Serine/arginine-rich splicing factor 8;Serine/arginine-rich splicing factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 464.7599 2 459.75581 917.497067 88511.59 0.37971 0.00017457 -0.15049 -6.919E-05 0.22922 0.00010538 459.755530138885 464.759680696906 66.511 0.67983 66.511 66.258 66.938 0 161 37 6 0 0 0 0.036793 2 34536 48.561 26.88 1 0.5899 0.50533 0 6073800 3905500 2168300 37235 258;133 14002 14384 58497;58498 58497 VGDVYIPR 8 0 1 Unmodified _VGDVYIPR_ 0 0 0 A0A024R3A8;Q9BRL6;J3QL05;J3KP15;Q8NAK9;Q53FN0;A0A024R8U5;Q01130;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7;B3KUY1 A0A024R3A8;J3QL05 J3QL05 SRP46;SRSF8;SRSF2;SFRS2 Serine/arginine-rich splicing factor 8;Serine/arginine-rich splicing factor 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 459.7557 2 459.75581 917.497067 NaN NaN NaN 0.10945 5.0321E-05 NaN NaN NaN NaN 66.927 0.61259 66.927 66.656 67.268 0 0 0 0 0.053513 1 33974 48.561 22.667 1 NaN NaN 0 2893100 2893100 0 37236 258;133 14002 14384 58499 58499 VGDYVYFENSSSNPYLIR 18 0 1 Unmodified _VGDYVYFENSSSNPYLIR_ 0 0 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;Q53SC0;E9PF88;H0YIT0;E7ESY4;Q13330 E7EQY4;E7ESY4 E7ESY4 MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1062.5078 2 1062.00764 2122.00073 NaN NaN NaN -0.44588 -0.00047353 NaN NaN NaN NaN 106.56 0.48425 106.56 106.34 106.82 0 0 0 0 6.6368E-06 2 66128 71.548 63.824 1 NaN NaN 0 15078000 15078000 0 37237 1223;1221 14003 14385 58500;58501 58500 VGDYVYFENSSSNPYLIR 18 0 1 Unmodified _VGDYVYFENSSSNPYLIR_ 0 0 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;Q53SC0;E9PF88;H0YIT0;E7ESY4;Q13330 E7EQY4;E7ESY4 E7ESY4 MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1062.5115 2 1062.00764 2122.00073 NaN NaN NaN -0.32648 -0.00034672 NaN NaN NaN NaN 106 0.53579 106 105.73 106.27 0 0 0 0 5.9288E-06 1 67277 72.496 65.126 1 NaN NaN 0 17114000 17114000 0 37238 1223;1221 14003 14385 58502 58502 VGDYVYFENSSSNPYLIR 18 0 1 Unmodified _VGDYVYFENSSSNPYLIR_ 0 0 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;Q53SC0;E9PF88;H0YIT0;E7ESY4;Q13330 E7EQY4;E7ESY4 E7ESY4 MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1067.5159 2 1062.00764 2122.00073 58548.18 0.37184 0.00039489 0.66019 0.00070113 1.032 0.001096 1062.50982108678 1067.51402727803 117.64 0.5546 117.64 117.44 118 7.6294E-06 149 24 10 0 0 0 2.3355E-05 2 69315 70.622 70.622 1 1.5248 1.2503 0 16860000 6524100 10336000 37239 1223;1221 14003 14385 58503;58504 58503 VGDYVYFENSSSNPYLIR 18 0 1 Unmodified _VGDYVYFENSSSNPYLIR_ 0 0 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;Q53SC0;E9PF88;H0YIT0;E7ESY4;Q13330 E7EQY4;E7ESY4 E7ESY4 MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1062.5084 2 1062.00764 2122.00073 58550.01 0.058995 6.2653E-05 0.82593 0.00087715 0.88493 0.0009398 1062.50983905764 1067.01351876483 117.54 0.47601 117.54 117.33 117.8 0 148 22 9 0 0 0 5.7277E-06 2 68344 83.204 83.204 1 1.454 1.1995 0 14408000 5679900 8728100 37240 1223;1221 14003 14385 58505;58506 58506 VGDYVYFENSSSNPYLVR 18 0 1 Unmodified _VGDYVYFENSSSNPYLVR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.5023 2 1054.99982 2107.98508 59255.58 0.63082 0.00066551 0.19199 0.00020255 0.82281 0.00086806 1055.50137102805 1060.50582889756 101.67 0.8346 101.67 101.34 102.17 0 422 65 9 0 0 0 6.8743E-08 3 62790 92.925 85.381 1 0.90948 0.96449 0 41856000 22847000 19009000 37241 168 14004 14386 58507;58508;58509 58509 VGDYVYFENSSSNPYLVR 18 0 1 Unmodified _VGDYVYFENSSSNPYLVR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1060.5066 2 1054.99982 2107.98508 58814.73 0.51398 0.00054225 0.19291 0.00020352 0.70689 0.00074577 1055.50117063879 1060.50593594083 101.05 0.73164 101.05 100.7 101.44 -7.6294E-06 393 57 8 0 0 0 6.8825E-12 3 63523 107.45 94.887 1 0.92504 1.0526 0 49228000 23365000 25862000 37242 168 14004 14386 58510;58511;58512 58512 VGDYVYFENSSSNPYLVR 18 0 1 Unmodified _VGDYVYFENSSSNPYLVR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1055.501 2 1054.99982 2107.98508 58921.84 0.69237 0.00073045 -0.11502 -0.00012135 0.57735 0.0006091 1055.49942799828 1060.00416041631 113.72 0.94893 113.72 113.43 114.37 0 260 42 12 0 0 0 8.9885E-08 2 66313 90.731 85.748 1 1.9718 1.6717 0 32321000 10302000 22019000 37243 168 14004 14386 58513;58514 58514 VGDYVYFENSSSNPYLVR 18 0 1 Unmodified _VGDYVYFENSSSNPYLVR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1055.5012 2 1054.99982 2107.98508 59136.82 0.26171 0.00027611 -0.097621 -0.00010299 0.16409 0.00017312 1055.49927686987 1060.50572017757 113.6 0.9131 113.6 113.33 114.24 0 264 41 10 0 0 0 1.5602E-22 2 65300 133.71 121.15 1 1.8912 1.6497 0 35706000 12461000 23245000 37244 168 14004 14386 58515;58516 58516 VGEVTYVELLMDAEGK 16 1 0 Oxidation (M) _VGEVTYVELLM(ox)DAEGK_ VGEVTYVELLM(1)DAEGK VGEVTYVELLM(113.99)DAEGK 0 1 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.9442 2 884.93731 1767.86007 64470.43 0.70535 0.00062419 -0.058492 -5.1762E-05 0.64686 0.00057243 884.937621256795 888.944394453112 115.06 0.9651 115.06 114.63 115.59 0 305 62 8 0 0 0 2.7405E-12 3 73016 113.99 113.99 1 2.0168 2.198 0 49706000 15126000 34580000 37245 1599 14005 14387 58517;58518;58519 58517 1384 VGEVTYVELLMDAEGK 16 1 0 Oxidation (M) _VGEVTYVELLM(ox)DAEGK_ VGEVTYVELLM(1)DAEGK VGEVTYVELLM(64.12)DAEGK 0 1 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.439 2 884.93731 1767.86007 64718.89 0.61863 0.00054745 -0.1202 -0.00010637 0.49844 0.00044108 884.937417339045 888.944414322367 114.76 0.82182 114.76 114.23 115.06 0 285 52 8 0 0 0 7.3496E-05 2 74577 64.121 64.121 1 1.9185 2.1304 0 49472000 16260000 33213000 37246 1599 14005 14387 58520;58521 58521 1384 VGEVTYVELLMDAEGK 16 1 0 Oxidation (M) _VGEVTYVELLM(ox)DAEGK_ VGEVTYVELLM(1)DAEGK VGEVTYVELLM(56.95)DAEGK 0 1 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 885.439 2 884.93731 1767.86007 66651.09 0.64429 0.00057016 -0.098062 -8.6779E-05 0.54623 0.00048338 885.439041283831 888.942317251257 126.79 0.47475 126.79 126.51 126.98 0 88 18 8 0 0 0 0.0001274 1 76303 56.951 56.951 1 0.40881 0.32427 0 4499600 3129300 1370300 37247 1599 14005 14387 58522 58522 1384 VGEVTYVELLMDAEGK 16 1 0 Unmodified _VGEVTYVELLMDAEGK_ 0 0 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.941 2 876.939853 1751.86515 67443.13 0.80498 0.00070592 0.17187 0.00015072 0.97686 0.00085664 876.940346693608 880.946625531693 123.34 0.41674 123.34 123.13 123.55 0 109 31 5 0 0 0 0.00017365 1 79927 61.11 61.11 1 0.93415 0.94952 0 6379200 3227600 3151600 37248 1599 14005 14388 58523 58523 VGEVTYVELLMDAEGK 16 1 0 Unmodified _VGEVTYVELLMDAEGK_ 0 0 0 P52272;A0A087X0X3;M0R019;B4DEG4;M0R2T0;M0R0N3 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 876.9409 2 876.939853 1751.86515 NaN NaN NaN 0.3219 0.00028229 NaN NaN NaN NaN 122.96 0.41545 122.96 122.68 123.1 -7.6294E-06 0 0 0 5.1075E-09 1 81518 102.62 78.897 1 NaN NaN 0 4689800 4689800 0 37249 1599 14005 14388 58524 58524 VGFQYEGTYK 10 1 0 Unmodified _VGFQYEGTYK_ 0 0 0 Q2VF42;Q2Q9H2;Q2Q9B7;A8K8D9;P11413;Q0PHS4 Q2VF42 Q2VF42 G6PD Glucose-6-phosphate 1-dehydrogenase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 600.2952 2 596.287671 1190.56079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.35 1 55.35 54.85 55.85 0 0 0 0 0.033074 1 31113 49.418 28.118 1 37250 775 14006 14389 58525 58525 VGGHAAEYGAEALER 15 0 1 Unmodified _VGGHAAEYGAEALER_ 0 0 0 CON__P01966 CON__P01966 CON__P01966 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.5829 3 510.58295 1528.72702 NaN NaN NaN -0.094026 -4.8008E-05 NaN NaN NaN NaN 39.002 0.57533 39.002 38.784 39.359 -3.8147E-06 0 0 0 1.6853E-05 1 20515 62.377 0 1 NaN NaN 0 29035000 29035000 0 + 37251 1149 14007 14390 58526 58526 VGGHAAEYGAEALER 15 0 1 Unmodified _VGGHAAEYGAEALER_ 0 0 0 CON__P01966 CON__P01966 CON__P01966 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.3708 2 765.370786 1528.72702 NaN NaN NaN 0.13726 0.00010506 NaN NaN NaN NaN 39.033 0.46152 39.033 38.817 39.278 0 0 0 0 0.00050047 1 20673 71.555 41.62 1 NaN NaN 0 13251000 13251000 0 + 37252 1149 14007 14390 58527 58527 VGGIYTVLQTK 11 1 0 Unmodified _VGGIYTVLQTK_ 0 0 0 P13807;Q53ER0;A8K6K7 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 589.8427 2 589.842613 1177.67067 78937.63 0.63026 0.00037176 0.037787 2.2288E-05 0.66805 0.00039404 589.842616592859 593.849551211789 94.435 0.84727 94.435 93.986 94.833 0 252 52 8 0 0 0 0.0004662 2 52742 76.282 0 1 0.47918 0.38671 0 22596000 15223000 7373500 37253 1479 14008 14391 58528;58529 58528 VGGIYTVLQTK 11 1 0 Unmodified _VGGIYTVLQTK_ 0 0 0 P13807;Q53ER0;A8K6K7 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 593.8497 2 589.842613 1177.67067 78917.68 0.67588 0.00039866 0.24803 0.0001463 0.92391 0.00054496 589.842732397825 593.849730440077 94.313 0.84384 94.313 93.907 94.751 0 279 53 8 0 0 0 0.0038555 2 51796 59.067 0 1 0.48589 0.39024 0 17587000 11982000 5605200 37254 1479 14008 14391 58530;58531 58531 VGGNEVTELSTGSSGHDSSLFEDK 24 1 0 Unmodified _VGGNEVTELSTGSSGHDSSLFEDK_ 0 0 0 Q9NPI1 Q9NPI1 Q9NPI1 BRD7 Bromodomain-containing protein 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.0482 3 818.041862 2451.10376 NaN NaN NaN -0.023621 -1.9323E-05 NaN NaN NaN NaN 74.456 0.20461 74.456 74.291 74.496 0 0 0 0 0.031534 1 44803 24.896 20.627 1 NaN NaN 0 5981000 0 5981000 37255 2057 14009 14392 58532 58532 VGGNIEVLGFNAR 13 0 1 Unmodified _VGGNIEVLGFNAR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.3661 2 673.364776 1344.715 NaN NaN NaN -0.52439 -0.00035311 NaN NaN NaN NaN 93.197 0.86661 93.197 92.732 93.598 0 0 0 0 1.0156E-05 2 56246 98.257 78.471 1 NaN NaN 0 63846000 0 63846000 37256 515 14010 14393 58533;58534 58533 VGGNIEVLGFNAR 13 0 1 Unmodified _VGGNIEVLGFNAR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.369 2 673.364776 1344.715 74292.06 0.73552 0.00049527 -0.36559 -0.00024618 0.36992 0.00024909 673.364801297819 678.368217502829 92.385 0.96526 92.385 91.844 92.809 0 438 81 7 0 0 0 0.001511 2 57476 57.532 57.532 1 0.74389 0.85327 0 180890000 107150000 73741000 37257 515 14010 14393 58535;58536 58536 VGGNIEVLGFNAR 13 0 1 Unmodified _VGGNIEVLGFNAR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.3684 2 673.364776 1344.715 74013.43 0.6746 0.00045425 -0.013558 -9.1296E-06 0.66104 0.00044512 673.364820275981 678.368849524208 106.48 0.77141 106.48 106.08 106.85 -7.6294E-06 268 43 8 0 0 0 0.00013532 2 60710 80.763 80.763 1 1.8629 1.5958 0 40852000 15380000 25471000 37258 515 14010 14393 58537;58538 58537 VGGNIEVLGFNAR 13 0 1 Unmodified _VGGNIEVLGFNAR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;Q659F1;Q659D0;Q6ZU36;B3KRD4 F5GWX5 F5GWX5 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.365 2 673.364776 1344.715 74660.85 0.65758 0.00044279 -0.072822 -4.9036E-05 0.58476 0.00039376 673.364805807846 678.368791183965 106.24 0.83796 106.24 105.88 106.72 0 283 50 8 0 0 0 5.6769E-05 2 59818 96.171 96.171 1 1.7683 1.5425 0 42043000 14886000 27157000 37259 515 14010 14393 58539;58540 58540 VGGNIEVLGFNTR 13 0 1 Unmodified _VGGNIEVLGFNTR_ 0 0 0 Q12873;B4DLC6;Q2TAZ1 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.3695 2 688.370058 1374.72556 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.419 1 92.419 91.919 92.919 0 0 0 0 0.015384 1 57268 50.648 26.394 1 37260 1701 14011 14394 58541 58541 VGGNIEVLGFNTR 13 0 1 Unmodified _VGGNIEVLGFNTR_ 0 0 0 Q12873;B4DLC6;Q2TAZ1 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 693.3759 2 688.370058 1374.72556 74503.67 0.60535 0.0004167 0.095689 6.5869E-05 0.70103 0.00048257 688.370154984219 693.374254221997 106.59 0.5145 106.59 106.34 106.85 0 127 31 5 0 0 0 0.02257 1 60877 35.2 35.2 1 1.8066 1.5527 0 6527800 3009300 3518500 37261 1701 14011 14394 58542 58542 VGGNIEVLGFNTR 13 0 1 Unmodified _VGGNIEVLGFNTR_ 0 0 0 Q12873;B4DLC6;Q2TAZ1 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.8772 2 688.370058 1374.72556 75406.02 0.58807 0.00040481 0.1727 0.00011888 0.76076 0.00052369 688.370207095786 693.374328648062 106.45 0.51825 106.45 106.17 106.69 0 140 33 5 0 0 0 0.012922 2 59906 38.875 38.875 1 1.9491 1.6825 0 4379800 1533900 2845900 37262 1701 14011 14394 58543;58544 58543 VGGSDEEASGIPSR 14 0 1 Unmodified _VGGSDEEASGIPSR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.8248 2 680.820595 1359.62664 76550.67 0.4733 0.00032223 -0.21898 -0.00014909 0.25432 0.00017315 680.820298618975 685.824669094841 29.037 0.51468 29.037 28.866 29.381 -1.9073E-06 109 29 8 0 0 0 4.4407E-31 3 13981 162.93 143.68 1 1.6258 1.8116 0 82651000 27031000 55620000 37263 493 14012 14395 58545;58546;58547 58545 VGGSDEEASGIPSR 14 0 1 Unmodified _VGGSDEEASGIPSR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.8209 2 680.820595 1359.62664 NaN NaN NaN -0.16738 -0.00011396 NaN NaN NaN NaN 28.56 0.33838 28.56 28.286 28.624 1.9073E-06 0 0 0 3.7399E-22 1 13554 135.08 119.94 1 NaN NaN 0 8172100 8172100 0 37264 493 14012 14395 58548 58548 VGGSDEEASGIPSR 14 0 1 Unmodified _VGGSDEEASGIPSR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.3466 2 680.820595 1359.62664 76115.75 0.29358 0.00019987 0.63468 0.0004321 0.92825 0.00063197 680.820732593866 685.825081087539 28.723 0.69925 28.723 28.261 28.961 0 165 62 6 0 0 0 6.8264E-07 1 13582 96.64 84.064 1 1.1376 1.1928 0 22837000 9768800 13068000 37265 493 14012 14395 58549 58549 VGGSDEEASGIPSR 14 0 1 Unmodified _VGGSDEEASGIPSR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.8203 2 680.820595 1359.62664 76920.48 0.7028 0.00047848 0.057274 3.8993E-05 0.76008 0.00051748 680.820428188325 685.824606781908 33.727 0.90155 33.727 33.291 34.192 0 272 79 5 0 0 0 0.005666 1 14867 43.382 38.069 1 1.4753 1.2635 0 6050200 2567900 3482400 37266 493 14012 14395 58550 58550 VGGSDEEASGIPSR 14 0 1 Unmodified _VGGSDEEASGIPSR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.8253 2 680.820595 1359.62664 75391.56 0.56852 0.00038706 0.19736 0.00013437 0.76588 0.00052143 680.820366150931 685.824559089956 33.927 0.91098 33.927 33.556 34.467 0 305 74 6 0 0 0 0.0009813 2 14416 56.951 46.947 1 1.5163 1.2632 0 6312700 2375900 3936800 37267 493 14012 14395 58551;58552 58552 VGGSQPPFQGQR 12 0 1 Unmodified _VGGSQPPFQGQR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.3203 2 629.320368 1256.62618 77163.11 0.29459 0.00018539 0.32647 0.00020545 0.62106 0.00039084 629.320067309364 634.325280510241 32.338 0.43826 32.338 32.178 32.616 3.8147E-06 64 20 6 0 0 0 0.0248 1 13940 36.772 36.772 1 1.7291 1.5002 0 2437800 948310 1489400 37268 2002 14013 14396 58553 58553 VGGSQPPFQGQR 12 0 1 Unmodified _VGGSQPPFQGQR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 629.3192 2 629.320368 1256.62618 77248.23 0.58026 0.00036517 0.35068 0.00022069 0.93094 0.00058586 629.319913399079 634.325133009759 32.512 0.34737 32.512 32.308 32.655 0 68 16 6 0 0 0 0.021992 1 13522 38.276 36.004 1 1.9363 1.7116 0 2432600 788780 1643800 37269 2002 14013 14396 58554 58554 VGGVGPADTHEPLRPEAEPGELER 24 0 2 Unmodified _VGGVGPADTHEPLRPEAEPGELER_ 0 0 1 J3KSW8;U6FSN9;Q6WCQ1;B9EGI2;Q8N236;H0Y2S9 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8203 4 628.816121 2511.23538 NaN NaN NaN 0.7312 0.00045979 NaN NaN NaN NaN 60.163 0.38759 60.163 59.984 60.372 0 0 0 0 0.0099767 1 35229 28.299 20.307 1 NaN NaN 0 7599000 0 7599000 37270 1330 14014 14397 58555 58555 VGGVGPADTHEPLRPEAEPGELER 24 0 2 Unmodified _VGGVGPADTHEPLRPEAEPGELER_ 0 0 1 J3KSW8;U6FSN9;Q6WCQ1;B9EGI2;Q8N236;H0Y2S9 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 634.0719 4 628.816121 2511.23538 NaN NaN NaN 1.0203 0.00064159 NaN NaN NaN NaN 71.427 0.43729 71.427 71.215 71.653 0 0 0 0 0.00060729 1 36853 38.933 25.875 1 NaN NaN 0 1701800 0 1701800 37271 1330 14014 14397 58556 58556 VGHFDPVTR 9 0 1 Unmodified _VGHFDPVTR_ 0 0 0 Q9UNE7;H3BTA3 Q9UNE7 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 346.518 3 343.182169 1026.52468 103513.8 -0.053992 -1.8529E-05 -0.17542 -6.0202E-05 -0.22942 -7.8731E-05 343.182211627539 346.518062277404 27.873 0.34617 27.873 27.649 27.995 0 66 19 6 0 0 0 0.005429 1 13148 43.635 27.432 1 1.8659 1.9243 0 21475000 5953400 15521000 37272 2115 14015 14398 58557 58557 VGIEAAEMLLANLR 14 0 1 Oxidation (M) _VGIEAAEM(ox)LLANLR_ VGIEAAEM(1)LLANLR VGIEAAEM(50.28)LLANLR 0 1 0 A8K8K1;O00442 A8K8K1 A8K8K1 RTCA RNA 3-terminal phosphate cyclase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 763.4197 2 758.413608 1514.81266 NaN NaN NaN -0.24756 -0.00018775 NaN NaN NaN NaN 127.07 0.55615 127.07 126.77 127.33 0 0 0 0 0.0039416 1 82627 50.284 40.596 1 NaN NaN 0 2697700 0 2697700 37273 778 14016 14399 58558 58558 607 VGIFTGAR 8 0 1 Unmodified _VGIFTGAR_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;F8VX13;F8VNX2;F8VZQ1;F8W1J8;F8VSF7;F8VW30;F8VSL1;F8VUB8;F8VYK8;F8VTQ3;F8VZI0;F8VVE3 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 410.738 2 410.73742 819.460287 95111.68 0.28153 0.00011564 0.58032 0.00023836 0.86185 0.00035399 410.737468725074 415.741680653368 51.398 0.60867 51.398 51.142 51.751 0 187 56 5 0 0 0 0.041092 1 28370 46.994 21.376 1 2.185 2.425 0 69076000 22756000 46320000 37274 61 14017 14400 58559 58559 VGILDVDLCGPSIPR 15 0 1 Unmodified _VGILDVDLCGPSIPR_ 0 0 0 Q2YS46;B2RDN3;Q9Y5Y2;H3BNF0;H3BNS4 Q2YS46 Q2YS46 NUBP1;NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.4326 2 805.932165 1609.84978 67316.97 0.838 0.00067537 -0.22792 -0.00018369 0.61008 0.00049169 806.432921325931 810.936672677487 117.51 0.49789 117.51 117.26 117.76 7.6294E-06 161 33 7 0 0 0 0.00019634 1 75137 76.655 76.655 1 1.2096 1.2087 0 16541000 8012000 8529400 37275 888 14018 14401 58560 58560 VGILDVDLCGPSIPR 15 0 1 Unmodified _VGILDVDLCGPSIPR_ 0 0 0 Q2YS46;B2RDN3;Q9Y5Y2;H3BNF0;H3BNS4 Q2YS46 Q2YS46 NUBP1;NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.9388 2 805.932165 1609.84978 68176.13 0.65539 0.0005282 0.73268 0.00059049 1.3881 0.0011187 805.932279170414 810.937561192423 117.1 0.50461 117.1 116.81 117.31 7.6294E-06 112 29 6 0 0 0 4.395E-06 2 76698 97.214 79.35 1 1.2692 1.2715 0 18513000 7965800 10547000 37276 888 14018 14401 58561;58562 58562 VGILLDEASGVNK 13 1 0 Unmodified _VGILLDEASGVNK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.867 2 657.866817 1313.71908 74252.13 0.86025 0.00056593 -0.097883 -6.4394E-05 0.76236 0.00050153 657.866682744139 661.873971567556 81.813 0.89929 81.813 81.545 82.444 0 288 66 6 0 0 0 5.0247E-06 1 48840 106.35 76.586 1 0.99577 1.0775 0 43245000 24207000 19038000 37277 1676 14019 14402 58563 58563 VGILLDEASGVNK 13 1 0 Unmodified _VGILLDEASGVNK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.8672 2 657.866817 1313.71908 75221.16 0.72841 0.0004792 0.11417 7.511E-05 0.84258 0.00055431 657.866743831726 661.87452856017 80.71 0.8979 80.71 80.235 81.133 0 244 74 6 0 0 0 0.00016144 1 49250 87.298 71.045 1 0.9058 0.99894 0 43727000 22489000 21239000 37278 1676 14019 14402 58564 58564 VGILLDEASGVNK 13 1 0 Unmodified _VGILLDEASGVNK_ 0 0 0 Q01780;B4DKG8;B4DFE4;Q59G73 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.8745 2 657.866817 1313.71908 75406.26 0.7013 0.00046136 0.22675 0.00014917 0.92805 0.00061054 657.866801930224 661.874064196175 93.187 0.80098 93.187 92.918 93.719 0 227 50 7 0 0 0 0.00030291 1 52000 65.5 49.247 1 0.97001 0.77799 0 7541400 3246300 4295100 37279 1676 14019 14402 58565 58565 VGINYQPPTVVPGGDLAK 18 1 0 Unmodified _VGINYQPPTVVPGGDLAK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.0043 2 912.996351 1823.97815 63731.7 0.44518 0.00040645 0.34051 0.00031088 0.78569 0.00071733 912.996843135763 917.00381237767 99.987 1.5611 99.987 99.412 100.97 0 970 126 12 0 0 0 2.6115E-16 5 61465 114.72 114.72 1 1.5221 1.8312 0 1241700000 510860000 730880000 37280 922;1257;1659;1869 14020 14403 58566;58567;58568;58569;58570 58569 VGINYQPPTVVPGGDLAK 18 1 0 Unmodified _VGINYQPPTVVPGGDLAK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.0054 2 912.996351 1823.97815 63689.43 0.53991 0.00049294 -3.2586 -0.0029751 -2.7187 -0.0024822 912.998728448226 917.00486149092 101.2 0.737 101.2 100.9 101.63 0 204 56 8 0 0 0 0.0054336 1 62176 33.227 24.039 1 1.1242 1.1541 0 12987000 5429800 7557300 37281 922;1257;1659;1869 14020 14403 58571 58571 VGINYQPPTVVPGGDLAK 18 1 0 Unmodified _VGINYQPPTVVPGGDLAK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 917.0046 2 912.996351 1823.97815 63537.67 0.64581 0.00058962 -0.022455 -2.0501E-05 0.62335 0.00056912 913.497869795213 917.003444795488 99.2 1.4573 99.2 98.781 100.24 0 886 120 12 0 0 0 3.3435E-05 4 62481 64.121 64.121 1 1.5316 1.8101 0 1401700000 536340000 865310000 37282 922;1257;1659;1869 14020 14403 58572;58573;58574;58575 58574 VGINYQPPTVVPGGDLAK 18 1 0 Unmodified _VGINYQPPTVVPGGDLAK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 913.4985 2 912.996351 1823.97815 63632.5 0.79426 0.00072516 -0.22931 -0.00020936 0.56495 0.0005158 913.49763262331 917.003258633203 112.43 1.3116 112.43 112.08 113.39 0 436 67 13 0 0 0 0.0010181 2 65150 37.998 37.998 1 1.2379 1.0882 0 230610000 101710000 128900000 37283 922;1257;1659;1869 14020 14403 58576;58577 58577 VGINYQPPTVVPGGDLAK 18 1 0 Unmodified _VGINYQPPTVVPGGDLAK_ 0 0 0 B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;B4DN58;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;Q71U36;B4DQK4;Q1ZYQ1;Q13748;Q9UQM3;Q6PEY2 B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBA1B;TUBA1C;TUBA4A;TUBA1A;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 913.4978 2 912.996351 1823.97815 63731.66 0.52805 0.00048211 0.081144 7.4085E-05 0.60919 0.00055619 913.497878365149 917.003528148485 112.33 1.1351 112.33 111.91 113.04 0 442 57 12 0 0 0 0.00026972 2 64128 47.189 47.189 1 1.2527 1.0832 0 228700000 105550000 123150000 37284 922;1257;1659;1869 14020 14403 58578;58579 58579 VGIQELGPR 9 0 1 Unmodified _VGIQELGPR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.7798 2 484.779816 967.545079 90298.23 0.072357 3.5077E-05 0.50128 0.00024301 0.57363 0.00027809 484.77992140749 489.784207056267 55.149 0.73923 55.149 54.777 55.516 3.8147E-06 237 71 5 0 0 0 0.014775 1 30960 55.37 20.968 1 1.0731 1.0978 0 34744000 17192000 17552000 37285 2048 14021 14404 58580 58580 VGIQELGPR 9 0 1 Unmodified _VGIQELGPR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7802 2 484.779816 967.545079 88818.73 0.22904 0.00011104 -0.087336 -4.2339E-05 0.14171 6.8697E-05 484.77963788618 489.78389561004 54.166 0.84422 54.166 53.669 54.513 0 243 75 5 0 0 0 0.0024962 1 30780 74.184 28.802 1 1.0496 1.2031 0 51414000 23528000 27886000 37286 2048 14021 14404 58581 58581 VGIQELGPR 9 0 1 Unmodified _VGIQELGPR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.78 2 484.779816 967.545079 90728.02 -0.067342 -3.2646E-05 -0.13264 -6.4303E-05 -0.19999 -9.6949E-05 484.779699427607 489.78391714711 63.518 0.78674 63.518 63.111 63.898 0 194 68 4 0 0 0 0.044207 1 32746 40.352 9.278 1 0.88045 0.75703 0 2688700 1432000 1256700 37287 2048 14021 14404 58582 58582 VGIQELGPR 9 0 1 Unmodified _VGIQELGPR_ 0 0 0 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.7839 2 484.779816 967.545079 88734.22 0.04669 2.2635E-05 -0.30531 -0.00014801 -0.25862 -0.00012538 484.779687007392 489.783751340561 63.955 0.80289 63.955 63.61 64.413 0 210 68 4 0 0 0 0.0049382 1 32231 67.993 26.964 1 0.84947 0.74545 0 2516400 1403500 1112900 37288 2048 14021 14404 58583 58583 VGIQQGLLSQSTR 13 0 1 Unmodified _VGIQQGLLSQSTR_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DSH9;Q6R954;F8WEE2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.8937 2 693.888615 1385.76268 74939.09 0.64904 0.00045036 -0.37213 -0.00025822 0.27691 0.00019214 693.888223547102 698.892550913505 69.312 0.40154 69.312 69.12 69.522 0 154 33 6 0 0 0 2.261E-06 1 40199 118.4 118.4 1 0.74346 0.77145 0 20694000 10552000 10142000 37289 1063 14022 14405 58584 58584 VGIQQGLLSQSTR 13 0 1 Unmodified _VGIQQGLLSQSTR_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DSH9;Q6R954;F8WEE2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.8943 2 693.888615 1385.76268 74653.59 0.67248 0.00046663 -0.52998 -0.00036775 0.1425 9.8879E-05 693.888122344584 698.892550304286 68.117 0.42354 68.117 67.925 68.349 0 135 33 6 0 0 0 9.6057E-05 2 40360 102.53 102.53 1 0.69422 0.72905 0 22977000 13248000 9728400 37290 1063 14022 14405 58585;58586 58585 VGIQQGLLSQSTR 13 0 1 Unmodified _VGIQQGLLSQSTR_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DSH9;Q6R954;F8WEE2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 698.8928 2 693.888615 1385.76268 72850.93 0.44944 0.00031186 -0.3073 -0.00021323 0.14213 9.8625E-05 693.888414625714 698.892627643639 79.27 0.56085 79.27 79.022 79.583 -7.6294E-06 178 33 8 0 0 0 0.0059054 2 42672 55.718 55.718 1 0.85459 0.73529 0 7564600 4025500 3539100 37291 1063 14022 14405 58587;58588 58588 VGIQQGLLSQSTR 13 0 1 Unmodified _VGIQQGLLSQSTR_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DSH9;Q6R954;F8WEE2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 693.8898 2 693.888615 1385.76268 73996.18 0.41844 0.00029035 -0.15532 -0.00010777 0.26312 0.00018258 693.888520270374 698.892754789581 79.494 0.5322 79.494 79.26 79.793 0 173 32 7 0 0 0 0.00034597 2 41926 63.408 63.408 1 0.8416 0.70042 0 6173500 3593700 2579900 37292 1063 14022 14405 58589;58590 58590 VGIVAWHPTAR 11 0 1 Unmodified _VGIVAWHPTAR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4E3S0;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7;F8VV53 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 406.2325 3 402.896252 1205.66693 94213.05 -0.091508 -3.6868E-05 0.0064813 2.6113E-06 -0.085027 -3.4257E-05 402.896177112311 406.232292705424 59.183 0.58189 59.183 58.984 59.566 0 165 44 6 0 0 0 0.0025355 1 33624 51.162 51.162 1 2.6566 2.8152 0 41573000 11203000 30370000 37293 340 14023 14406 58591 58591 VGIVAWHPTAR 11 0 1 Unmodified _VGIVAWHPTAR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4E3S0;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7;F8VV53 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 406.2319 3 402.896252 1205.66693 94424.92 0.14381 5.7939E-05 0.022209 8.9478E-06 0.16602 6.6887E-05 402.896177650877 406.23230594012 57.864 0.47305 57.864 57.643 58.116 0 165 38 6 0 0 0 0.00091814 1 33482 60.641 60.641 1 2.4578 2.7352 0 43512000 10005000 33506000 37294 340 14023 14406 58592 58592 VGIVAWHPTAR 11 0 1 Unmodified _VGIVAWHPTAR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4E3S0;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7;F8VV53 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 406.2321 3 402.896252 1205.66693 94332.48 -0.043367 -1.7472E-05 0.066414 2.6758E-05 0.023047 9.2854E-06 402.896256822372 406.232279314443 68.597 0.37033 68.597 68.427 68.798 0 94 27 5 0 0 0 0.039688 1 35841 24.071 24.071 1 5.9187 4.9974 0 4802300 658160 4144100 37295 340 14023 14406 58593 58593 VGIVAWHPTAR 11 0 1 Unmodified _VGIVAWHPTAR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4E3S0;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7;F8VV53 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 406.2321 3 402.896252 1205.66693 96660.93 -0.15883 -6.3993E-05 0.10571 4.259E-05 -0.053122 -2.1403E-05 402.896333270499 406.232306036139 68.886 0.47837 68.886 68.649 69.127 -7.6294E-06 95 26 5 0 0 0 0.051047 1 35220 21.631 21.631 1 8.0645 7.0258 0 3512500 512310 3000200 37296 340 14023 14406 58594 58594 VGLADLHPDVFATAPR 16 0 1 Unmodified _VGLADLHPDVFATAPR_ 0 0 0 K7EKI4;K7ELF1;K7ELQ0;K7ES61;A0A024R7C5;X6RAY8;Q9BYD3 K7EKI4 K7EKI4 MRPL4 39S ribosomal protein L4, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.3016 3 560.301895 1677.88385 84018.7 0.85578 0.00047949 0.47932 0.00026856 1.3351 0.00074806 560.636461573896 563.638250811427 100.84 0.85918 100.84 100.4 101.26 0 257 63 7 0 0 0 0.00098769 2 61742 34.721 34.721 1 1.2682 1.3114 0 37269000 15078000 22190000 37297 219 14024 14407 58595;58596 58595 VGLADLHPDVFATAPR 16 0 1 Unmodified _VGLADLHPDVFATAPR_ 0 0 0 K7EKI4;K7ELF1;K7ELQ0;K7ES61;A0A024R7C5;X6RAY8;Q9BYD3 K7EKI4 K7EKI4 MRPL4 39S ribosomal protein L4, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.6391 3 560.301895 1677.88385 82378.01 0.70615 0.00039566 0.089432 5.0109E-05 0.79558 0.00044577 560.301888307239 563.637963150061 99.671 0.8086 99.671 99.377 100.19 -7.6294E-06 311 63 8 0 0 0 0.0036464 1 62746 32.55 32.55 1 1.3937 1.4329 0 21248000 7776700 13471000 37298 219 14024 14407 58597 58597 VGLADLHPDVFATAPR 16 0 1 Unmodified _VGLADLHPDVFATAPR_ 0 0 0 K7EKI4;K7ELF1;K7ELQ0;K7ES61;A0A024R7C5;X6RAY8;Q9BYD3 K7EKI4 K7EKI4 MRPL4 39S ribosomal protein L4, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 560.3021 3 560.301895 1677.88385 83110.97 0.89488 0.0005014 -0.13203 -7.3974E-05 0.76286 0.00042743 560.301266536968 563.638072325236 112.38 0.4785 112.38 112.17 112.64 0 95 26 7 0 0 0 0.027073 1 65287 15.942 15.942 1 1.0891 0.91555 0 3097500 1312200 1785300 37299 219 14024 14407 58598 58598 VGLFALSDIK 10 1 0 Unmodified _VGLFALSDIK_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q96DQ7;Q9H6H8 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.8137 2 531.813325 1061.6121 86320.34 0.65739 0.00034961 -0.38141 -0.00020284 0.27598 0.00014677 531.813289310889 535.820354115853 109.31 0.59618 109.31 108.98 109.58 -7.6294E-06 101 40 4 0 0 0 0.0088882 2 68336 55.461 24.943 1 0.68534 0.6942 0 5777300 3057400 2719900 37300 898 14025 14408 58599;58600 58600 VGLFALSDIK 10 1 0 Unmodified _VGLFALSDIK_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q96DQ7;Q9H6H8 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.8195 2 531.813325 1061.6121 86142.05 0.46423 0.00024688 -0.48478 -0.00025781 -0.020556 -1.0932E-05 531.813366889234 535.820458722432 108.57 0.52548 108.57 108.33 108.85 0 114 35 4 0 0 0 0.0013651 2 69405 73.985 34.963 1 0.66556 0.67214 0 8322700 5842100 2480600 37301 898 14025 14408 58601;58602 58601 VGLFALSDIK 10 1 0 Unmodified _VGLFALSDIK_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q96DQ7;Q9H6H8 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 535.8208 2 531.813325 1061.6121 85412.9 0.71167 0.00037847 -0.11754 -6.2508E-05 0.59413 0.00031597 531.81314229087 535.820336687076 120.39 0.4082 120.39 120.1 120.51 -7.6294E-06 68 22 4 0 0 0 0.040069 1 70468 38.75 11.447 1 1.7396 1.3531 0 2140500 825140 1315400 37302 898 14025 14408 58603 58603 VGLGLGYLELPQINYK 16 1 0 Unmodified _VGLGLGYLELPQINYK_ 0 0 0 B4DIX0;Q13045 B4DIX0 B4DIX0 FLII Protein flightless-1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.0056 2 888.998362 1775.98217 66285.03 1.0852 0.00096477 0.19271 0.00017132 1.2779 0.0011361 888.997974002409 893.005833548979 127.06 0.32239 127.06 126.87 127.19 -7.6294E-06 66 16 6 0 0 0 6.6564E-09 2 82663 108.9 108.9 1 2.2662 2.2317 0 8594900 2746800 5848000 37303 984 14026 14409 58604;58605 58604 VGLGLGYLELPQINYK 16 1 0 Unmodified _VGLGLGYLELPQINYK_ 0 0 0 B4DIX0;Q13045 B4DIX0 B4DIX0 FLII Protein flightless-1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 893.006 2 888.998362 1775.98217 66047.8 0.83269 0.00074026 0.28154 0.00025029 1.1142 0.00099055 889.499709051512 893.005541846252 126.67 0.37396 126.67 126.48 126.86 7.6294E-06 94 21 7 0 0 0 2.2589E-06 3 84467 92.943 92.943 1 2.249 2.3313 0 11280000 4022400 7257900 37304 984 14026 14409 58606;58607;58608 58606 VGLIAAR 7 0 1 Unmodified _VGLIAAR_ 0 0 0 P62917;B4DVG7;E9PKU4;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 350.2299 2 350.229231 698.443909 100397.2 0.49799 0.00017441 -0.10523 -3.6856E-05 0.39276 0.00013755 350.229183203717 355.233190870791 41.278 1.1154 41.278 40.815 41.93 -3.8147E-06 432 92 8 0 0 0 0.0014225 2 21604 137.2 66.713 1 0.81851 0.97147 0 756730000 446020000 310710000 37305 1653 14027 14410 58609;58610 58610 VGLIAAR 7 0 1 Unmodified _VGLIAAR_ 0 0 0 P62917;B4DVG7;E9PKU4;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 350.229 2 350.229231 698.443909 101770.1 0.23967 8.3938E-05 -0.40444 -0.00014165 -0.16477 -5.7707E-05 350.229134854928 355.233118333407 40.239 1.1224 40.239 39.761 40.883 0 440 92 9 0 0 0 0.010895 2 21378 109.88 48.875 1 0.76331 0.90213 0 1445600000 797710000 647920000 37306 1653 14027 14410 58611;58612 58612 VGLIAAR 7 0 1 Unmodified _VGLIAAR_ 0 0 0 P62917;B4DVG7;E9PKU4;E9PP36 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 350.2292 2 350.229231 698.443909 100965.7 -0.098122 -3.4365E-05 -0.029326 -1.0271E-05 -0.12745 -4.4636E-05 350.229156204117 355.233214120142 46.076 1.4752 46.076 45.559 47.034 -3.8147E-06 407 95 8 0 0 0 0.02675 1 21473 77.944 36.735 1 0.87207 0.76084 0 52048000 28323000 23726000 37307 1653 14027 14410 58613 58613 VGLIALK 7 1 0 Unmodified _VGLIALK_ 0 0 0 H0Y9G6;E7ETU7;B4DKM0;P09001;E9PF06 H0Y9G6 H0Y9G6 MRPL3 39S ribosomal protein L3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.2495 2 357.249632 712.484711 107361.1 -0.059087 -2.1109E-05 0.22126 7.9046E-05 0.16218 5.7937E-05 357.249780049824 361.256703382369 73.289 0.24965 73.289 73.149 73.399 0 61 22 4 0 0 0 0.03153 1 42980 66.994 14.404 1 1.5245 1.4959 0 22859000 10638000 12221000 37308 992 14028 14411 58614 58614 VGLIALK 7 1 0 Unmodified _VGLIALK_ 0 0 0 H0Y9G6;E7ETU7;B4DKM0;P09001;E9PF06 H0Y9G6 H0Y9G6 MRPL3 39S ribosomal protein L3, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 357.2496 2 357.249632 712.484711 107891 0.53807 0.00019223 -0.41315 -0.0001476 0.12492 4.4628E-05 357.249596391602 361.256423436469 71.852 0.23537 71.852 71.754 71.989 0 61 21 4 0 0 0 0.040059 1 43119 59.641 9.5003 1 1.1675 1.2135 0 18935000 6912800 12022000 37309 992 14028 14411 58615 58615 VGLPPLEK 8 1 0 Unmodified _VGLPPLEK_ 0 0 0 P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.2647 2 426.763104 851.511654 93935.34 -0.19688 -8.402E-05 -0.2038 -8.6974E-05 -0.40068 -0.00017099 426.762630160133 430.770412368118 66.935 1.1179 66.935 66.465 67.583 0 341 86 8 0 0 0 0.027337 2 38733 53.968 16.409 1 1.535 1.5055 0 20594000 8026400 12567000 37310 1615 14029 14412 58616;58617 58617 VGLQVVAVK 9 1 0 Unmodified _VGLQVVAVK_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z5E7;B7Z4F6;B7Z532 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.8047 2 456.797478 911.580402 91094.09 -0.15403 -7.0359E-05 0.26851 0.00012265 0.11448 5.2296E-05 456.797572231048 460.804619468162 69.806 0.65533 69.806 69.488 70.143 0 164 58 4 0 0 0 0.00015544 2 40494 108.09 92.648 1 1.6943 1.6632 0 23012000 7852700 15159000 37311 143 14030 14413 58618;58619 58618 VGLQVVAVK 9 1 0 Unmodified _VGLQVVAVK_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z5E7;B7Z4F6;B7Z532 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.7974 2 456.797478 911.580402 90749.34 0.17877 8.1659E-05 0.1689 7.7152E-05 0.34766 0.00015881 456.797545774964 460.804586940168 68.558 0.6416 68.558 68.229 68.871 0 175 52 4 0 0 0 0.00026424 2 40712 104.21 74.024 1 1.9314 2.0478 0 23471000 8616300 14855000 37312 143 14030 14413 58620;58621 58621 VGLQVVAVK 9 1 0 Unmodified _VGLQVVAVK_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z5E7;B7Z4F6;B7Z532 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 456.7974 2 456.797478 911.580402 91020.58 0.14643 6.6888E-05 0.040403 1.8456E-05 0.18683 8.5344E-05 456.797479693882 460.804474132655 79.746 0.51974 79.746 79.507 80.027 0 114 32 5 0 0 0 0.02572 2 43046 47.749 47.749 1 0.96223 0.80679 0 1870700 973230 897490 37313 143 14030 14413 58622;58623 58623 VGLQVVAVK 9 1 0 Unmodified _VGLQVVAVK_ 0 0 0 B7Z597;B3GQS7;A0A024R3X4;P10809;B7Z5E7;B7Z4F6;B7Z532 B7Z597 B7Z597 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 456.7976 2 456.797478 911.580402 91101.91 -0.086585 -3.9552E-05 0.03886 1.7751E-05 -0.047725 -2.1801E-05 456.79746130619 460.804514689265 79.864 0.51411 79.864 79.579 80.093 0 101 31 4 0 0 0 0.047679 2 42272 38.962 38.962 1 0.89569 0.74133 0 1592000 739170 852830 37314 143 14030 14413 58624;58625 58625 VGLTNYAAAYCTGLLLAR 18 0 1 Unmodified _VGLTNYAAAYCTGLLLAR_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6;Q5T7N0 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 969.0155 2 964.008935 1926.00332 NaN NaN NaN -0.14607 -0.00014081 NaN NaN NaN NaN 118.02 0.53791 118.02 117.74 118.28 0 0 0 0 1.7908E-23 3 75532 126.1 110.56 1 NaN NaN 0 89393000 0 89393000 37315 653 14031 14414 58626;58627;58628 58627 VGLTSEILNSFEHEFLSK 18 1 0 Unmodified _VGLTSEILNSFEHEFLSK_ 0 0 0 E9PIQ6;Q14181 E9PIQ6 E9PIQ6 POLA2 DNA polymerase alpha subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.7135 3 684.021234 2049.04187 73621.57 0.64942 0.00044422 0.016584 1.1343E-05 0.666 0.00045556 684.021062512658 687.026573404726 133.25 0.16122 133.25 133.16 133.32 0 17 4 7 0 0 0 1.1923E-05 1 87228 61.477 61.477 1 1.4457 1.5109 0 11905000 4288600 7616500 37316 1240 14032 14415 58629 58629 VGLTSEILNSFEHEFLSK 18 1 0 Unmodified _VGLTSEILNSFEHEFLSK_ 0 0 0 E9PIQ6;Q14181 E9PIQ6 E9PIQ6 POLA2 DNA polymerase alpha subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.7144 3 684.021234 2049.04187 74585.35 0.73332 0.00050161 0.17412 0.0001191 0.90744 0.00062071 684.354996134338 686.692820873981 133.22 0.20522 133.22 133.13 133.34 0 21 5 7 0 0 0 1.0024E-22 3 89428 129.11 129.11 1 1.453 1.4749 0 16684000 7278700 9405000 37317 1240 14032 14415 58630;58631;58632 58630 VGLTVGYQIR 10 0 1 Unmodified _VGLTVGYQIR_ 0 0 0 Q6P158;B4DKW2 Q6P158 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.3229 2 553.321848 1104.62914 NaN NaN NaN 0.35016 0.00019375 NaN NaN NaN NaN 78.005 0.408 78.005 77.761 78.169 0 0 0 0 0.00013543 1 47213 93.429 52.399 1 NaN NaN 0 10137000 10137000 0 37318 1850 14033 14416 58633 58633 VGNLGLATSFFNER 14 0 1 Unmodified _VGNLGLATSFFNER_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A0J9YVQ7;A0A087WVZ1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.8962 2 762.893897 1523.77324 69761.88 1.0519 0.00080246 0.12832 9.7894E-05 1.1802 0.00090035 762.894228092435 767.898107482068 110.81 0.58757 110.81 110.56 111.15 0 215 39 9 0 0 0 2.5566E-06 2 69565 135.08 135.08 1 1.6042 1.8157 0 104760000 40662000 64102000 37319 522 14034 14417 58634;58635 58635 VGNLGLATSFFNER 14 0 1 Unmodified _VGNLGLATSFFNER_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A0J9YVQ7;A0A087WVZ1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.8987 2 762.893897 1523.77324 68892.92 0.83023 0.00063337 0.12481 9.5216E-05 0.95503 0.00072859 762.894250138733 767.898042680099 110.12 0.61182 110.12 109.93 110.54 0 211 39 10 0 0 0 1.8308E-46 4 70784 178.71 178.71 1 1.7466 1.9964 0 154500000 55055000 99440000 37320 522 14034 14417 58636;58637;58638;58639 58636 VGNLGLATSFFNER 14 0 1 Unmodified _VGNLGLATSFFNER_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A0J9YVQ7;A0A087WVZ1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.9007 2 762.893897 1523.77324 69775.88 0.83271 0.00063527 0.14868 0.00011342 0.98138 0.00074869 762.894248552339 767.89796350445 122.12 0.44199 122.12 121.89 122.33 0 115 20 8 0 0 0 0.0015775 2 72700 52.693 50.073 1 1.3695 1.1554 0 28919000 12999000 15920000 37321 522 14034 14417 58640;58641 58640 VGNLGLATSFFNER 14 0 1 Unmodified _VGNLGLATSFFNER_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A0J9YVQ7;A0A087WVZ1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.8958 2 762.893897 1523.77324 69822.5 1.002 0.0007644 0.082561 6.2985E-05 1.0845 0.00082739 763.395086433217 767.897992946508 121.93 0.48623 121.93 121.65 122.14 0 116 22 8 0 0 0 0.007528 1 71667 51.013 51.013 1 1.3424 1.1498 0 20835000 8617000 12218000 37322 522 14034 14417 58642 58642 VGPADDGPAPSGEEEGEGGGEAGGK 25 1 0 Unmodified _VGPADDGPAPSGEEEGEGGGEAGGK_ 0 0 0 Q9UKN8;Q05CN7;F2Z356 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1117.4819 2 1113.47509 2224.93563 58656.32 0.12936 0.00014404 0.28181 0.00031379 0.41118 0.00045783 1113.47539808411 1117.48250459148 31.57 0.38807 31.57 31.402 31.79 1.9073E-06 119 36 6 0 0 0 8.3551E-06 1 15541 44.807 44.807 1 0.86259 0.87644 0 13352000 6464600 6887000 37323 2107 14035 14418 58643 58643 VGPADDGPAPSGEEEGEGGGEAGGK 25 1 0 Unmodified _VGPADDGPAPSGEEEGEGGGEAGGK_ 0 0 0 Q9UKN8;Q05CN7;F2Z356 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1113.9768 2 1113.47509 2224.93563 60035.13 0.028559 3.1799E-05 0.17455 0.00019435 0.20311 0.00022615 1113.97709546242 1118.48459434995 31.019 0.34926 31.019 30.878 31.228 0 117 29 6 0 0 0 6.4939E-09 2 15229 53.828 53.828 1 0.69167 0.72461 0 10701000 5001100 5699900 37324 2107 14035 14418 58644;58645 58645 VGPATPSAQVGK 12 1 0 Unmodified _VGPATPSAQVGK_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.309 2 556.308938 1110.60332 81552.08 0.79031 0.00043966 -0.48829 -0.00027164 0.30202 0.00016802 556.30868539248 560.315578167676 28.802 0.43097 28.802 28.572 29.003 0 70 22 5 0 0 0 4.8054E-06 1 13687 110.47 100.89 1 0.64738 0.69749 0 41056000 23816000 17240000 37325 1712;1225 14036 14419 58646 58646 VGPATPSAQVGK 12 1 0 Unmodified _VGPATPSAQVGK_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.3093 2 556.308938 1110.60332 81778.09 0.50345 0.00028007 -0.10134 -5.6377E-05 0.40211 0.0002237 556.308728908635 560.315826265553 28.045 0.29621 28.045 27.907 28.203 0 74 16 7 0 0 0 0.0017686 1 13209 60.298 60.298 1 0.73306 0.82107 0 54288000 29029000 25259000 37326 1712;1225 14036 14419 58647 58647 VGPATPSAQVGK 12 1 0 Unmodified _VGPATPSAQVGK_ 0 0 0 E7ETY2;B4DRA2;Q13428;Q59FZ2 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.3163 2 556.308938 1110.60332 80600.1 0.54597 0.00030373 -0.36096 -0.0002008 0.18501 0.00010292 556.308508681503 560.315702046448 32.677 0.34674 32.677 32.506 32.853 0 67 15 6 0 0 0 0.017556 1 13661 41.399 41.399 1 1.584 1.2574 0 4013700 1519500 2494200 37327 1712;1225 14036 14419 58648 58648 VGPDVVTDPAFLVTR 15 0 1 Unmodified _VGPDVVTDPAFLVTR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.4335 2 793.432855 1584.85116 67920.23 1.0404 0.00082552 -0.12173 -9.6585E-05 0.91871 0.00072894 793.432580231429 798.436953240917 112.12 0.63657 112.12 111.81 112.44 0 258 45 7 0 0 0 0.0002205 2 70514 73.466 73.466 1 0.83443 0.91838 0 54661000 29106000 25555000 37328 2073 14037 14420 58649;58650 58649 VGPDVVTDPAFLVTR 15 0 1 Unmodified _VGPDVVTDPAFLVTR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.4373 2 793.432855 1584.85116 68126.72 0.96972 0.00076941 -0.059979 -4.7589E-05 0.90974 0.00072182 793.432698756444 798.437059638228 111.57 0.70595 111.57 111.23 111.94 -7.6294E-06 243 47 7 0 0 0 0.00016862 2 71979 78.324 78.324 1 0.84727 0.98637 0 60686000 35030000 25656000 37329 2073 14037 14420 58651;58652 58652 VGPDVVTDPAFLVTR 15 0 1 Unmodified _VGPDVVTDPAFLVTR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.433 2 793.432855 1584.85116 69039.19 0.91248 0.00072399 0.63056 0.00050031 1.543 0.0012243 793.433223253287 798.437455977969 123.14 0.62132 123.14 122.89 123.51 7.6294E-06 137 27 7 0 0 0 0.00022652 1 73503 73.848 73.848 1 1.0009 0.84132 0 26878000 12273000 14606000 37330 2073 14037 14420 58653 58653 VGPDVVTDPAFLVTR 15 0 1 Unmodified _VGPDVVTDPAFLVTR_ 0 0 0 Q9NV31 Q9NV31 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.4341 2 793.432855 1584.85116 68614.95 0.96942 0.00076917 0.52249 0.00041456 1.4919 0.0011837 793.433106351281 798.437379869222 123.02 0.55867 123.02 122.76 123.32 0 142 27 7 0 0 0 0.0018483 1 72469 46.592 46.592 1 1.0601 0.92474 0 26327000 11799000 14528000 37331 2073 14037 14420 58654 58654 VGPEELPVVGQLLR 14 0 1 Unmodified _VGPEELPVVGQLLR_ 0 0 0 A0A024R169;Q9NXF1;B4DQR0 A0A024R169 A0A024R169 TEX10 Testis-expressed sequence 10 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.4399 2 753.437941 1504.86133 73998.88 0.77754 0.00058583 0.17061 0.00012854 0.94815 0.00071437 753.438245620874 758.943261196389 123.98 0.40905 123.98 123.79 124.2 0 111 27 6 0 0 0 0.0041708 1 80431 45.908 43.591 1 1.291 1.3419 0 5462500 2351600 3110900 37332 72 14038 14421 58655 58655 VGPEELPVVGQLLR 14 0 1 Unmodified _VGPEELPVVGQLLR_ 0 0 0 A0A024R169;Q9NXF1;B4DQR0 A0A024R169 A0A024R169 TEX10 Testis-expressed sequence 10 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.4428 2 753.437941 1504.86133 72326.04 0.69702 0.00052516 0.21257 0.00016016 0.90959 0.00068532 753.438301482054 758.441987496405 123.57 0.43348 123.57 123.35 123.78 -7.6294E-06 100 30 5 0 0 0 0.00017534 2 81996 72.848 62.539 1 1.0541 1.0596 0 6628000 2924800 3703100 37333 72 14038 14421 58656;58657 58656 VGPGAGESPGTPPFR 15 0 1 Unmodified _VGPGAGESPGTPPFR_ 0 0 0 B7ZLC9;Q8TEQ6;Q58EZ8 B7ZLC9 B7ZLC9 GEMIN5 Gem-associated protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.36 2 713.35969 1424.70483 NaN NaN NaN 0.10454 7.4572E-05 NaN NaN NaN NaN 57.93 0.422 57.93 57.694 58.116 0 0 0 0 0.00029571 1 32797 75.695 57.887 1 NaN NaN 0 4925400 4925400 0 37334 1114 14039 14422 58658 58658 VGPGFDAALQVSAAIGTNLR 20 0 1 Unmodified _VGPGFDAALQVSAAIGTNLR_ 0 0 0 Q03164;E9PR05;Q9UPD0;Q9Y6P1;H7C5W4;H0YEU4;H7C5V8 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 984.0343 2 979.028714 1956.04287 NaN NaN NaN 1.0112 0.00098995 NaN NaN NaN NaN 134.53 0.25238 134.53 134.37 134.62 0 0 0 0 0.0093679 1 82122 38.995 31.084 1 NaN NaN 0 6537700 0 6537700 37335 1680 14040 14423 58659 58659 VGPGFDAALQVSAAIGTNLR 20 0 1 Unmodified _VGPGFDAALQVSAAIGTNLR_ 0 0 0 Q03164;E9PR05;Q9UPD0;Q9Y6P1;H7C5W4;H0YEU4;H7C5V8 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 984.5344 2 979.028714 1956.04287 62429.82 0.37378 0.00036594 0.68942 0.00067496 1.0632 0.0010409 979.530542141455 984.033048473227 134.37 0.28082 134.37 134.28 134.56 0 31 10 5 0 0 0 1.8045E-06 1 81140 71.692 66.613 1 2.2266 1.8293 0 13861000 4180000 9681400 37336 1680 14040 14423 58660 58660 VGPSSGDAPEPSSR 14 0 1 Unmodified _VGPSSGDAPEPSSR_ 0 0 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.8202 2 671.815313 1341.61607 NaN NaN NaN 0.27707 0.00018614 NaN NaN NaN NaN 22.113 0.3102 22.113 21.971 22.281 0 0 0 0 0.0041794 1 8275 59.57 50.387 1 NaN NaN 0 5759800 0 5759800 37337 300 14041 14424 58661 58661 VGPSSGDAPEPSSR 14 0 1 Unmodified _VGPSSGDAPEPSSR_ 0 0 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.8155 2 671.815313 1341.61607 NaN NaN NaN NaN NaN NaN NaN NaN NaN 22.196 1 22.196 21.696 22.696 1.9073E-06 0 0 0 0.0076164 1 8336 53.569 42.417 1 37338 300 14041 14424 58662 58662 VGPSSGDAPEPSSR 14 0 1 Unmodified _VGPSSGDAPEPSSR_ 0 0 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.815 2 671.815313 1341.61607 72684.09 0.15036 0.00010102 0.71707 0.00048174 0.86743 0.00058275 671.81491395729 676.820040459406 22.019 0.31103 22.019 21.866 22.177 1.9073E-06 51 13 6 0 0 0 0.00022458 2 8120 65.842 65.395 1 2.1931 2.1717 0 12256000 4253500 8002800 37339 300 14041 14424 58663;58664 58664 VGPSSGDAPEPSSR 14 0 1 Unmodified _VGPSSGDAPEPSSR_ 0 0 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 676.8193 2 671.815313 1341.61607 NaN NaN NaN 0.16573 0.00011134 NaN NaN NaN NaN 24.543 0.39918 24.543 24.333 24.732 0 0 0 0 0.010354 1 8712 51.841 47.39 1 NaN NaN 0 1374900 0 1374900 37340 300 14041 14424 58665 58665 VGPSVPR 7 0 1 Unmodified _VGPSVPR_ 0 0 0 O75151;Q8N359;B4DH04;E7ET14;A0A087WW48;Q6P2C5 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 356.2117 2 356.211038 710.407523 102720.8 0.54721 0.00019492 -0.33316 -0.00011867 0.21406 7.6249E-05 356.210961136997 361.214886007158 25.982 0.26905 25.982 25.836 26.105 0 49 15 4 0 0 0 0.011218 2 11478 108.98 20.248 1 1.1101 1.1139 0 19043000 8850900 10192000 37341 1400 14042 14425 58666;58667 58667 VGQALELPLR 10 0 1 Unmodified _VGQALELPLR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.3297 2 548.329673 1094.64479 82198.67 0.61634 0.00033796 -0.10738 -5.888E-05 0.50896 0.00027908 548.329790174895 553.333920259201 89.026 0.29601 89.026 88.79 89.086 0 70 20 7 0 0 0 9.7309E-12 2 53718 139.02 101.46 1 0.71882 0.80402 0 88118000 50992000 37126000 37342 1937 14043 14426 58668;58669 58669 VGQALELPLR 10 0 1 Unmodified _VGQALELPLR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.3306 2 548.329673 1094.64479 82912.05 0.9333 0.00051176 0.23511 0.00012892 1.1684 0.00064067 548.329902688208 553.334019611336 87.862 0.27824 87.862 87.674 87.952 0 61 18 8 0 0 0 2.2021E-16 3 54188 157.99 120.27 1 0.90726 1.0459 0 72429000 37882000 34546000 37343 1937 14043 14426 58670;58671;58672 58671 VGQALELPLR 10 0 1 Unmodified _VGQALELPLR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 548.3298 2 548.329673 1094.64479 82081.67 0.37163 0.00020378 0.30363 0.00016649 0.67527 0.00037027 548.329923202348 553.333910164118 101.71 0.25368 101.71 101.52 101.77 0 55 15 6 0 0 0 0.022046 2 57644 46.001 31.121 1 0.51568 0.4408 0 5833200 3179000 2654200 37344 1937 14043 14426 58673;58674 58673 VGQALELPLR 10 0 1 Unmodified _VGQALELPLR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.33 2 548.329673 1094.64479 NaN NaN NaN 0.2909 0.00015951 NaN NaN NaN NaN 101.48 0.21166 101.48 101.35 101.57 0 0 0 0 0.0045936 1 56660 72.042 47.098 1 NaN NaN 0 3212200 3212200 0 37345 1937 14043 14426 58675 58675 VGQAVDVVGQAGK 13 1 0 Unmodified _VGQAVDVVGQAGK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q13041 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3453 2 614.338227 1226.6619 77247.11 0.52862 0.00032475 0.31533 0.00019372 0.84395 0.00051847 614.338951356243 618.345340536629 40.205 0.6542 40.205 39.818 40.472 0 146 56 4 0 0 0 7.4959E-05 1 21313 94.66 83.508 1 2.3072 2.4518 0 20578000 5547400 15031000 37346 1707 14044 14427 58676 58676 VGQAVDVVGQAGKPK 15 2 0 Unmodified _VGQAVDVVGQAGKPK_ 0 0 1 Q59EG8;Q13200;B4DM22;Q13041 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.2864 3 484.943819 1451.80963 NaN NaN NaN -0.31159 -0.00015111 NaN NaN NaN NaN 33.106 0.39299 33.106 32.893 33.286 -3.8147E-06 0 0 0 0.012029 1 16430 49.188 43.909 1 NaN NaN 0 12180000 0 12180000 37347 1707 14045 14428 58677 58677 VGQAVDVVGQAGKPK 15 2 0 Unmodified _VGQAVDVVGQAGKPK_ 0 0 1 Q59EG8;Q13200;B4DM22;Q13041 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.9272 2 726.91209 1451.80963 NaN NaN NaN 0.032382 2.3539E-05 NaN NaN NaN NaN 32.324 0.23159 32.324 32.175 32.407 0 0 0 0 0.0015352 1 16077 79.286 72.597 1 NaN NaN 0 10803000 0 10803000 37348 1707 14045 14428 58678 58678 VGQAVDVVGQAGKPK 15 2 0 Unmodified _VGQAVDVVGQAGKPK_ 0 0 1 Q59EG8;Q13200;B4DM22;Q13041 Q59EG8 Q59EG8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.9131 2 726.91209 1451.80963 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.309 1 32.309 31.809 32.809 0 0 0 0 0.0049879 1 16064 72.34 37.619 1 37349 1707 14045 14428 58679 58679 VGQDPVLR 8 0 1 Unmodified _VGQDPVLR_ 0 0 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.2529 2 442.253434 882.492316 90414.94 0.20516 9.0732E-05 -0.87695 -0.00038783 -0.67179 -0.0002971 442.252732754638 447.257178221416 31.848 1.2586 31.848 31.151 32.41 0 442 118 6 0 0 0 0.0078194 1 15705 81.296 51.111 1 0.58156 0.63615 0 52602000 33769000 18833000 37350 666 14046 14429 58680 58680 VGQEIEVRPGIVSK 14 1 1 Unmodified _VGQEIEVRPGIVSK_ 0 0 1 P41091 P41091 P41091 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.2928 3 504.291107 1509.85149 85891.47 0.10427 5.2581E-05 0.18033 9.0938E-05 0.2846 0.00014352 504.625791394522 510.298458243126 54.86 0.5235 54.86 54.573 55.097 3.8147E-06 182 50 6 0 0 0 0.021638 1 30787 26.365 26.365 1 2.2637 2.6635 0 33819000 14847000 18972000 37351 1559 14047 14430 58681 58681 VGQEIEVRPGIVSK 14 1 1 Unmodified _VGQEIEVRPGIVSK_ 0 0 1 P41091 P41091 P41091 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.9464 2 755.933022 1509.85149 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.759 1 53.759 53.259 54.259 3.8147E-06 0 0 0 6.2093E-06 1 30718 98.942 75.569 1 37352 1559 14047 14430 58682 58682 VGQFGQHYQSSASSSSSSSFPSPQR 25 0 1 Unmodified _VGQFGQHYQSSASSSSSSSFPSPQR_ 0 0 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.7358 3 877.400383 2629.17932 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.62 1 48.62 48.12 49.12 0 0 0 0 0.044303 1 27238 33.758 26.883 1 37353 2100 14048 14431 58683 58683 VGQLSEGAIAAIMQK 15 1 0 Oxidation (M) _VGQLSEGAIAAIM(ox)QK_ VGQLSEGAIAAIM(1)QK VGQLSEGAIAAIM(55.31)QK 0 1 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.4183 2 766.411066 1530.80758 NaN NaN NaN -0.97333 -0.00074597 NaN NaN NaN NaN 79.732 0.17738 79.732 79.585 79.763 0 0 0 0 0.0016464 1 48414 55.314 43.995 1 NaN NaN 0 4118300 0 4118300 37354 1525 14049 14432 58684 58684 1290 VGQYLNCIVEK 11 1 0 Unmodified _VGQYLNCIVEK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.8503 2 661.842287 1321.67002 75827.83 0.60122 0.00039791 0.038089 2.5209E-05 0.63931 0.00042312 661.841888375376 665.850260366174 71.482 0.66872 71.482 71.149 71.818 0 232 59 6 0 0 0 2.3195E-08 2 41674 121.73 103.87 1 0.92032 0.90204 0 22440000 10528000 11913000 37355 1741 14050 14433 58685;58686 58686 VGQYLNCIVEK 11 1 0 Unmodified _VGQYLNCIVEK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.8511 2 661.842287 1321.67002 74719.24 0.50533 0.00033445 0.30457 0.00020157 0.80989 0.00053602 661.842108818481 665.850493714705 70.185 0.62459 70.185 69.899 70.524 0 223 51 6 0 0 0 6.9031E-08 3 41824 114.4 101.05 1 0.97798 0.99676 0 30908000 15945000 14962000 37356 1741 14050 14433 58687;58688;58689 58689 VGRPIVEALR 10 0 2 Unmodified _VGRPIVEALR_ 0 0 1 Q9HBB9;Q8WUM5;Q9HC39;I3L2C7;P57678;I3L399;E7EN12;B4DZ29;I3L4M4;I3L4A4;I3L1J7 Q9HBB9 Q9HBB9 GEMIN4 Gem-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 377.2369 3 370.564502 1108.67168 101907.8 0.15749 5.8361E-05 -0.0050467 -1.8701E-06 0.15245 5.6491E-05 370.564375055465 377.236672852625 47.955 0.41991 47.955 47.8 48.22 0 121 36 5 0 0 0 0.00042174 1 26035 79.201 65.432 1 1.9695 2.139 0 33455000 10494000 22961000 37357 1940 14051 14434 58690 58690 VGSELCAGWEEQFEVDREPSLDR 23 0 2 Unmodified _VGSELCAGWEEQFEVDREPSLDR_ 0 0 1 Q6AHZ7;Q12789;Q6AWA4;H3BU55 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 903.7493 3 903.413413 2707.21841 64139.39 0.775 0.00070014 0.0040179 3.6298E-06 0.77902 0.00070377 903.747646333284 910.08673629681 112.88 0.3846 112.88 112.66 113.04 -7.6294E-06 40 16 5 0 0 0 0.054642 1 65640 13.057 13.057 1 1.299 1.1838 0 2348600 1165300 1183400 37358 1699 14052 14435 58691 58691 VGSHITGGDIYGIVSENSLIK 21 1 0 Unmodified _VGSHITGGDIYGIVSENSLIK_ 0 0 0 P38606;C9JA17;C9JVW8 P38606 P38606 ATP6V1A V-type proton ATPase catalytic subunit A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.3896 3 720.382942 2158.127 73497.23 0.82126 0.00059162 -0.10936 -7.8781E-05 0.7119 0.00051284 720.716900133302 723.388983936264 116.76 0.48892 116.76 116.45 116.94 0 46 21 4 0 0 0 0.054468 1 67757 9.7552 9.7552 1 1.7621 1.4296 0 4408700 1726800 2681900 37359 1553 14053 14436 58692 58692 VGSLDNVGHLPAGGAVK 17 1 0 Unmodified _VGSLDNVGHLPAGGAVK_ 0 0 0 H0Y2V1;A0A024R2V0;F8W9U4;Q86Y04;E7EVA0;P27816;B4DSQ1;H7C4C5;Q8NDS5 H0Y2V1 H0Y2V1 MAP4;DKFZp547H1810 Microtubule-associated protein;Microtubule-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.2926 3 530.958128 1589.85255 87020.98 0.42832 0.00022742 -0.1748 -9.2812E-05 0.25351 0.00013461 530.958067135106 533.629284540951 61.051 0.37422 61.051 60.838 61.212 -3.8147E-06 82 37 4 0 0 0 0.003026 1 35748 31.876 31.876 1 1.026 1.0294 0 13770000 7116300 6654100 37360 123 14054 14437 58693 58693 VGSPATVTFQQNK 13 1 0 Unmodified _VGSPATVTFQQNK_ 0 0 0 E7ETD6;Q12830;F5GXF5;J3QQK4 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.8626 2 688.862066 1375.70958 NaN NaN NaN 1.5756 0.0010854 NaN NaN NaN NaN 45.378 0.39169 45.378 45.162 45.553 0 0 0 0 0.00077554 2 24869 79.659 58.789 1 NaN NaN 0 11863000 11863000 0 37361 1224 14055 14438 58694;58695 58694 VGSQDVSLESSQAVGK 16 1 0 Unmodified _VGSQDVSLESSQAVGK_ 0 0 0 B4DRJ7;Q5EBM7;Q53F79;A0A024R6Q7;H3BQM0;G4U4J3;Q8NDF8 B4DRJ7 B4DRJ7 PAPD5 Non-canonical poly(A) RNA polymerase PAPD5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.9021 2 795.902116 1589.78968 NaN NaN NaN 0.29949 0.00023837 NaN NaN NaN NaN 45.932 0.086792 45.932 45.882 45.968 -3.8147E-06 0 0 0 0.00027056 1 25287 68.676 49.93 1 NaN NaN 0 2023200 2023200 0 37362 206 14056 14439 58696 58696 VGSQDVSLESSQAVGK 16 1 0 Unmodified _VGSQDVSLESSQAVGK_ 0 0 0 B4DRJ7;Q5EBM7;Q53F79;A0A024R6Q7;H3BQM0;G4U4J3;Q8NDF8 B4DRJ7 B4DRJ7 PAPD5 Non-canonical poly(A) RNA polymerase PAPD5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.9042 2 795.902116 1589.78968 69005.77 0.66839 0.00053197 0.31286 0.000249 0.98125 0.00078098 795.902405544548 799.909166573339 54.749 0.48627 54.749 54.53 55.016 0 129 31 6 0 0 0 0.028749 1 27319 24.399 19.015 1 1.2181 1.004 0 2364200 1075500 1288700 37363 206 14056 14439 58697 58697 VGSTSQPTLETFQDLLHR 18 0 1 Unmodified _VGSTSQPTLETFQDLLHR_ 0 0 0 A0A024R134;F8W126;Q96EZ8 A0A024R134 A0A024R134 MCRS1 Microspherule protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.0154 3 677.016483 2028.02762 74099.97 0.79051 0.00053519 -1.1472 -0.00077664 -0.35665 -0.00024146 677.015573117714 680.687101742079 107.87 0.44549 107.87 107.71 108.15 7.6294E-06 122 32 6 0 0 0 0.00046449 1 68996 24.859 24.859 1 0.60973 0.6035 0 12343000 7962600 4380000 37364 67 14057 14440 58698 58698 VGSVEEFQGQER 12 0 1 Unmodified _VGSVEEFQGQER_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.3289 2 682.82568 1363.63681 72331.87 0.97318 0.00066451 0.77492 0.00052914 1.7481 0.0011936 682.827464829487 688.330976212905 38.017 0.44781 38.017 37.799 38.247 0 133 36 6 0 0 0 0.0027546 1 19516 57.785 52.844 1 1.4252 1.4463 0 15080000 5276500 9803000 37365 1102 14058 14441 58699 58699 VGSVEEFQGQER 12 0 1 Unmodified _VGSVEEFQGQER_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.8281 2 682.82568 1363.63681 74073.48 0.83049 0.00056708 -0.13638 -9.3121E-05 0.69411 0.00047396 683.328179302004 688.330810994445 37.117 0.35888 37.117 36.924 37.283 0 115 29 7 0 0 0 0.0002099 1 19230 80.763 64.882 1 1.2737 1.2649 0 16122000 7848400 8274000 37366 1102 14058 14441 58700 58700 VGSVEEFQGQER 12 0 1 Unmodified _VGSVEEFQGQER_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.8307 2 682.82568 1363.63681 73513.65 0.55677 0.00038018 0.42784 0.00029214 0.98462 0.00067232 682.826976960547 687.829943521458 43.889 0.42176 43.889 43.778 44.2 0 122 28 6 0 0 0 0.019325 1 20233 40.154 35.37 1 1.2917 1.133 0 1850200 673510 1176700 37367 1102 14058 14441 58701 58701 VGTDLLEEEITK 12 1 0 Unmodified _VGTDLLEEEITK_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;Q9BW34;E9PQZ1;H0YE72;H0YE58 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.8576 2 673.856115 1345.69768 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.584 1 90.584 90.084 91.084 0 0 0 0 7.5259E-11 1 54752 115.57 77.281 1 37368 875 14059 14442 58702 58702 VGTDLLEEEITK 12 1 0 Unmodified _VGTDLLEEEITK_ 0 0 0 D3DWK1;B2RAR6;E9PRY8;P29692;Q9BW34;E9PQZ1;H0YE72;H0YE58 D3DWK1 D3DWK1 EEF1D Elongation factor 1-delta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.8649 2 673.856115 1345.69768 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.667 1 89.667 89.167 90.167 0 0 0 0 4.5474E-16 1 55385 121.61 81.256 1 37369 875 14059 14442 58703 58703 VGTFFSEVK 9 1 0 Unmodified _VGTFFSEVK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.2766 2 507.26875 1012.52295 84956.85 0.31073 0.00015762 0.51079 0.00025911 0.82152 0.00041673 507.2683736126 511.275926526001 72.718 0.50992 72.718 72.544 73.054 0 154 37 6 0 0 0 0.019835 2 42612 50.805 39.736 1 1.9575 2.1263 0 46630000 16332000 30298000 37370 1611 14060 14443 58704;58705 58704 VGTFFSEVK 9 1 0 Unmodified _VGTFFSEVK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.276 2 507.26875 1012.52295 82854.88 0.0087882 4.458E-06 0.5797 0.00029406 0.58849 0.00029852 507.268510923303 511.276100070369 71.361 0.44668 71.361 71.237 71.683 0 102 33 4 0 0 0 0.0042207 1 42734 69.812 54.372 1 2.2563 2.5363 0 73139000 20191000 52948000 37371 1611 14060 14443 58706 58706 VGTFFSEVK 9 1 0 Unmodified _VGTFFSEVK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 511.2762 2 507.26875 1012.52295 86264.83 0.31826 0.00016144 1.0649 0.00054019 1.3832 0.00070163 507.268901395019 511.276093684484 83.256 0.24038 83.256 83.111 83.351 0 58 13 6 0 0 0 0.008633 1 45335 60.91 47.922 1 1.9613 1.5217 0 3474900 1243000 2231900 37372 1611 14060 14443 58707 58707 VGTFFSEVK 9 1 0 Unmodified _VGTFFSEVK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.2758 2 507.26875 1012.52295 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.327 1 83.327 82.827 83.827 0 0 0 0 0.014831 1 44601 58.981 27.907 1 37373 1611 14060 14443 58708 58708 VGTLDVLVGLSDELAK 16 1 0 Unmodified _VGTLDVLVGLSDELAK_ 0 0 0 A0A024R9I0;P21283 A0A024R9I0 A0A024R9I0 ATP6V1C1 V-type proton ATPase subunit C 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 818.9683 2 814.958903 1627.90325 NaN NaN NaN 0.13282 0.00010824 NaN NaN NaN NaN 132.34 0.53168 132.34 132.1 132.63 0 0 0 0 0.0032214 1 86376 57.175 40.543 1 NaN NaN 0 1805000 0 1805000 37374 279 14061 14444 58709 58709 VGTLDVLVGLSDELAK 16 1 0 Unmodified _VGTLDVLVGLSDELAK_ 0 0 0 A0A024R9I0;P21283 A0A024R9I0 A0A024R9I0 ATP6V1C1 V-type proton ATPase subunit C 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 818.9654 2 814.958903 1627.90325 NaN NaN NaN -0.41409 -0.00033747 NaN NaN NaN NaN 131.98 0.43462 131.98 131.76 132.19 -1.5259E-05 0 0 0 0.00025298 1 88393 69.451 50.705 1 NaN NaN 0 2433600 0 2433600 37375 279 14061 14444 58710 58710 VGTSFSIPVVSDVR 14 0 1 Unmodified _VGTSFSIPVVSDVR_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.9034 2 731.898648 1461.78274 71207.69 1.0663 0.00078039 0.08813 6.4502E-05 1.1544 0.00084489 731.898695545035 736.902803018539 108.38 0.69862 108.38 108.12 108.81 0 349 50 9 0 0 0 9.2129E-15 2 67591 134.98 134.98 1 1.0944 1.2769 0 195360000 92009000 103350000 37376 759 14062 14445 58711;58712 58712 VGTSFSIPVVSDVR 14 0 1 Unmodified _VGTSFSIPVVSDVR_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.9035 2 731.898648 1461.78274 70930.9 0.88112 0.00064489 -0.033476 -2.4501E-05 0.84764 0.00062039 731.898672276373 736.90270379187 107.84 0.68002 107.84 107.53 108.21 0 356 49 10 0 0 0 0.00019192 2 68741 70.488 70.488 1 1.096 1.2494 0 137170000 61904000 75270000 37377 759 14062 14445 58713;58714 58714 VGTSFSIPVVSDVR 14 0 1 Unmodified _VGTSFSIPVVSDVR_ 0 0 0 A8K6D2;Q92979;B4DQC7;V9GYP5;A0A087WWQ2 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 736.9031 2 731.898648 1461.78274 NaN NaN NaN 0.0042528 3.1126E-06 NaN NaN NaN NaN 119.71 0.68663 119.71 119.41 120.09 7.6294E-06 0 0 0 7.6534E-15 1 70877 119.39 100.61 1 NaN NaN 0 36006000 0 36006000 37378 759 14062 14445 58715 58715 VGTVIGSNK 9 1 0 Unmodified _VGTVIGSNK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.76 2 437.753267 873.491981 88836.04 -0.061598 -2.6965E-05 -0.62086 -0.00027178 -0.68246 -0.00029875 437.753111423678 441.760095194228 23.513 0.43284 23.513 23.233 23.666 0 71 20 6 0 0 0 2.4592E-05 2 9379 114.28 61.565 1 0.72156 0.70953 0 23637000 12891000 10746000 37379 139 14063 14446 58716;58717 58716 VGVIGFPNVGK 11 1 0 Unmodified _VGVIGFPNVGK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.8207 2 543.818941 1085.62333 81954.27 1.2143 0.00066036 0.30754 0.00016725 1.5218 0.00082761 543.819018255542 547.825979943643 91.045 1.1894 91.045 90.366 91.556 0 427 97 8 0 0 0 0.00037794 2 54979 83.206 83.206 1 0.8384 0.95953 0 187390000 107060000 80339000 37380 125 14064 14447 58718;58719 58719 VGVIGFPNVGK 11 1 0 Unmodified _VGVIGFPNVGK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 543.8195 2 543.818941 1085.62333 81341.07 0.66366 0.00036091 0.10468 5.6929E-05 0.76834 0.00041784 543.818969864216 547.825882807571 90.104 0.96802 90.104 89.551 90.519 0 470 84 8 0 0 0 1.8338E-05 2 55592 105.57 92.531 1 0.79987 0.90529 0 134310000 79679000 54626000 37381 125 14064 14447 58720;58721 58721 VGVIGFPNVGK 11 1 0 Unmodified _VGVIGFPNVGK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.8262 2 543.818941 1085.62333 81724.34 0.61292 0.00033332 -0.051126 -2.7803E-05 0.5618 0.00030552 543.818829923024 547.825928705999 103.81 0.6254 103.81 103.54 104.17 0 228 40 8 0 0 0 0.011607 2 58937 48.283 48.283 1 1.1338 0.9262 0 33660000 15119000 18541000 37382 125 14064 14447 58722;58723 58722 VGVIGFPNVGK 11 1 0 Unmodified _VGVIGFPNVGK_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.8193 2 543.818941 1085.62333 81781.14 0.33846 0.00018406 0.29723 0.00016164 0.63569 0.0003457 543.819018898404 547.826094552638 103.63 0.79198 103.63 103.32 104.11 7.6294E-06 236 41 8 0 0 0 0.0022508 2 57968 61.962 61.962 1 1.1189 0.92505 0 32387000 15611000 16777000 37383 125 14064 14447 58724;58725 58725 VGVLAASMEAK 11 1 0 Oxidation (M) _VGVLAASM(ox)EAK_ VGVLAASM(1)EAK VGVLAASM(92.73)EAK 0 1 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.2989 2 546.291899 1090.56925 81075.34 0.79914 0.00043656 -0.40889 -0.00022338 0.39024 0.00021319 546.291893954311 550.299010810788 38.078 0.90863 38.078 37.449 38.358 0 298 76 5 0 0 0 9.7697E-05 2 19207 92.732 76.85 1 2.6983 2.9616 0 53439000 16872000 36568000 37384 1010 14065 14448 58726;58727 58726 800 VGVLAASMEAK 11 1 0 Oxidation (M) _VGVLAASM(ox)EAK_ VGVLAASM(1)EAK VGVLAASM(70.4)EAK 0 1 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.299 2 546.291899 1090.56925 NaN NaN NaN -0.66309 -0.00036224 NaN NaN NaN NaN 36.857 0.436 36.857 36.643 37.079 0 0 0 0 0.00089502 1 18962 70.399 55.017 1 NaN NaN 0 51461000 0 51461000 37385 1010 14065 14448 58728 58728 800 VGVNGFGR 8 0 1 Unmodified _VGVNGFGR_ 0 0 0 V9HVZ4;P04406;Q2TSD0;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 408.2239 2 403.219395 804.424236 NaN NaN NaN -0.053631 -2.1625E-05 NaN NaN NaN NaN 36.896 0.71288 36.896 36.515 37.228 0 0 0 0 0.038208 1 18558 54.571 16.963 1 NaN NaN 0 46277000 0 46277000 37386 1442 14066 14449 58729 58729 VGVNGFGR 8 0 1 Unmodified _VGVNGFGR_ 0 0 0 V9HVZ4;P04406;Q2TSD0;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 408.2253 2 403.219395 804.424236 NaN NaN NaN 0.23161 9.3391E-05 NaN NaN NaN NaN 35.986 0.81691 35.986 35.644 36.461 3.8147E-06 0 0 0 0.0058891 1 18360 86.866 86.866 1 NaN NaN 0 46036000 0 46036000 37387 1442 14066 14449 58730 58730 VGVPTVDLDAQGR 13 0 1 Unmodified _VGVPTVDLDAQGR_ 0 0 0 B0AZM4;A8K6F0;A0A024R9L1;O60306 B0AZM4 B0AZM4 AQR Intron-binding protein aquarius MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.8583 2 663.854241 1325.69393 76341.82 0.44364 0.00029451 -0.49908 -0.00033131 -0.055437 -3.6802E-05 663.854024279499 668.857766720605 77.163 0.4061 77.163 76.968 77.374 0 138 32 6 0 0 0 0.0035111 2 46577 49.5 30.755 1 1.2596 1.2624 0 17240000 7863200 9376500 37388 282 14067 14450 58731;58732 58731 VGVVGLPNVGK 11 1 0 Unmodified _VGVVGLPNVGK_ 0 0 0 Q05DU1;A0A024R9Y6;Q9NVN8 Q05DU1 Q05DU1 GNL3L Guanine nucleotide-binding protein-like 3-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.8257 2 519.818941 1037.62333 87604.66 0.11723 6.0939E-05 -0.15778 -8.202E-05 -0.040554 -2.1081E-05 519.818706993103 523.82586877752 90.034 0.46721 90.034 89.764 90.231 0 93 30 4 0 0 0 0.060443 1 48982 33.263 33.263 1 0.8239 0.70417 0 1421300 828660 592590 37389 291 14068 14451 58733 58733 VGWSTMQASLDLGTDK 16 1 0 Oxidation (M) _VGWSTM(ox)QASLDLGTDK_ VGWSTM(1)QASLDLGTDK VGWSTM(48.57)QASLDLGTDK 0 1 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499;B4DP70 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 862.9151 2 862.911627 1723.8087 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.15 1 85.15 84.65 85.65 0 0 0 0 0.0035461 1 52365 48.568 29.325 1 37390 452 14069 14452 58734 58734 319 VHDLALR 7 0 1 Unmodified _VHDLALR_ 0 0 0 B3KRR1;B3KSL5;A0A0A6YYJ8;Q9Y383 B3KRR1 B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.2469 2 412.24287 822.471186 94084.61 0.21493 8.8605E-05 -0.44665 -0.00018413 -0.23171 -9.5523E-05 412.242766271405 417.24636768729 26.625 0.5702 26.625 26.252 26.822 -1.9073E-06 93 31 7 0 0 0 0.026711 2 11987 76.847 22.473 1 0.73365 0.80644 0 40657000 22373000 18284000 37391 494 14070 14453 58735;58736 58735 VHELNEEIGK 10 1 0 Unmodified _VHELNEEIGK_ 0 0 0 B3KRR1;B3KSL5;A0A0A6YYJ8;Q9Y383;B8ZZ09;B8ZZ10;A8MYV2;D3DU41;Q1W6G4;Q53G47;Q9NQ29 B3KRR1;B8ZZ09 B3KRR1 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 584.3047 2 584.303852 1166.59315 77625.98 0.27298 0.0001595 -0.045768 -2.6742E-05 0.22721 0.00013276 584.303758346002 588.310941585601 27.031 0.38023 27.031 26.876 27.256 -1.9073E-06 117 19 9 0 0 0 1.1956E-05 2 12300 123.42 100.37 1 0.74567 0.8094 0 45899000 24196000 21704000 37392 494;800 14071 14454 58737;58738 58737 VHELNEEIGK 10 1 0 Unmodified _VHELNEEIGK_ 0 0 0 B3KRR1;B3KSL5;A0A0A6YYJ8;Q9Y383;B8ZZ09;B8ZZ10;A8MYV2;D3DU41;Q1W6G4;Q53G47;Q9NQ29 B3KRR1;B8ZZ09 B3KRR1 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.3046 2 584.303852 1166.59315 78127.73 0.39087 0.00022838 -0.41393 -0.00024186 -0.023061 -1.3475E-05 584.303739275073 588.310964028219 30.434 0.46895 30.434 30.266 30.735 0 121 30 6 0 0 0 0.035846 1 12571 50.978 43.052 1 0.48866 0.38648 0 4153700 2760000 1393700 37393 494;800 14071 14454 58739 58739 VHELQGNAPSDPDAVSAEEALK 22 1 0 Unmodified _VHELQGNAPSDPDAVSAEEALK_ 0 0 0 Q8N516;Q4LE38;O95163;F5H2T0;B3KXE7;B4E3I9;Q68DI5;B3KNB2 Q8N516 Q8N516 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.7111 3 759.704633 2276.09207 71107.09 0.65964 0.00050113 -0.21079 -0.00016014 0.44885 0.000341 759.704238091114 762.710426597871 65.428 0.40514 65.428 65.277 65.682 0 97 33 5 0 0 0 5.6604E-09 2 38551 52.79 52.79 1 1.7225 1.7578 0 12026000 5173600 6852500 37394 1419 14072 14455 58740;58741 58741 VHFEESSK 8 1 0 Unmodified _VHFEESSK_ 0 0 0 A0A024R1N4;P12956;B1AHC9;B4DE32;B2RDN9;B4E356 A0A024R1N4 A0A024R1N4 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.7328 2 481.732532 961.45051 86421.74 0.011421 5.502E-06 0.16991 8.185E-05 0.18133 8.7352E-05 481.732560997242 485.739659131557 17.697 0.28118 17.697 17.558 17.84 0 41 9 7 0 0 0 0.0010053 1 4793 117.4 92.1 1 0.40036 0.43291 0 42858000 31204000 11654000 37395 82 14073 14456 58742 58742 VHFTAER 7 0 1 Unmodified _VHFTAER_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 435.2286 2 430.224677 858.434801 92019.23 -0.25368 -0.00010914 0.21889 9.4172E-05 -0.034787 -1.4966E-05 430.224642114614 435.228763404038 20.5 0.41767 20.5 20.345 20.763 1.9073E-06 63 18 7 0 0 0 0.014567 2 6899 99.919 43.409 1 1.6009 1.7736 0 63856000 24408000 39448000 37396 618 14074 14457 58743;58744 58743 VHFTAER 7 0 1 Unmodified _VHFTAER_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.2244 2 430.224677 858.434801 91507.89 -0.10944 -4.7082E-05 0.21648 9.3135E-05 0.10704 4.6053E-05 430.224659231334 435.228752741031 20.175 0.33769 20.175 20.043 20.381 0 44 11 8 0 0 0 0.010731 2 6495 110.34 52.707 1 1.5009 1.6951 0 47212000 18173000 29039000 37397 618 14074 14457 58745;58746 58746 VHFTAER 7 0 1 Unmodified _VHFTAER_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 435.229 2 430.224677 858.434801 91093.16 -0.55961 -0.00024076 0.095649 4.115E-05 -0.46396 -0.00019961 430.224787418376 435.228986755418 21.784 0.53109 21.784 21.622 22.153 0 54 19 6 0 0 0 0.044796 1 6724 57.463 18.245 1 0.67242 0.56628 0 4606200 2704200 1902100 37398 618 14074 14457 58747 58747 VHFTAER 7 0 1 Unmodified _VHFTAER_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 435.2284 2 430.224677 858.434801 90674.14 -0.6207 -0.00026704 0.34426 0.00014811 -0.27644 -0.00011893 430.224860250091 435.229019343303 21.524 0.61626 21.524 21.359 21.975 1.9073E-06 72 23 6 0 0 0 0.057613 1 6121 51.572 16.68 1 0.92479 0.80017 0 3435800 1624900 1810800 37399 618 14074 14457 58748 58748 VHGPGIQSGTTNK 13 1 0 Unmodified _VHGPGIQSGTTNK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.3459 2 648.338758 1294.66296 NaN NaN NaN -0.52654 -0.00034138 NaN NaN NaN NaN 17.719 0.16254 17.719 17.617 17.78 -1.9073E-06 0 0 0 0.011261 1 4858 52.49 25.375 1 NaN NaN 0 1786800 0 1786800 37400 1504 14075 14458 58749 58749 VHGPGIQSGTTNK 13 1 0 Unmodified _VHGPGIQSGTTNK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.3456 2 648.338758 1294.66296 79253.68 0.411 0.00026647 0.3888 0.00025207 0.7998 0.00051854 648.339273738959 652.345489905612 17.632 0.30398 17.632 17.513 17.817 0 36 11 6 0 0 0 7.7021E-06 1 4540 108.43 100.78 1 1.1051 1.2189 0 2890800 1107000 1783800 37401 1504 14075 14458 58750 58750 VHGPGIQSGTTNKPNK 16 2 0 Unmodified _VHGPGIQSGTTNKPNK_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.9686 3 545.625149 1633.85362 81172.89 0.70614 0.00038529 -0.25486 -0.00013906 0.45128 0.00024623 545.624966438623 550.967774186634 16.605 0.30231 16.605 16.493 16.795 0 63 12 8 0 0 0 1.0629E-12 2 3912 120.7 120.7 1 1.5307 1.7733 0 10499000 4138300 6360500 37402 1504 14076 14459 58751;58752 58752 VHGPGIQSGTTNKPNK 16 2 0 Unmodified _VHGPGIQSGTTNKPNK_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.9679 3 545.625149 1633.85362 80994.3 0.022628 1.2346E-05 -0.15268 -8.3307E-05 -0.13005 -7.0961E-05 545.625126806214 550.967815184533 16.278 0.44187 16.278 16.145 16.587 0 138 25 8 0 0 0 5.3285E-18 3 3486 132.51 132.51 1 1.5163 1.7278 0 10253000 3818900 6434600 37403 1504 14076 14459 58753;58754;58755 58754 VHGPGIQSGTTNKPNK 16 2 0 Unmodified _VHGPGIQSGTTNKPNK_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.7276 4 409.470681 1633.85362 93603.75 -0.37183 -0.00015226 0.00042835 1.754E-07 -0.37141 -0.00015208 409.47062322165 413.728397695755 16.247 0.37229 16.247 16.111 16.484 0 93 22 7 0 0 0 0.014461 1 3496 22.606 22.606 1 1.4791 1.6991 0 4421300 1867800 2553600 37404 1504 14076 14459 58756 58756 VHGPGIQSGTTNKPNK 16 2 0 Unmodified _VHGPGIQSGTTNKPNK_ 0 0 1 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.968 3 545.625149 1633.85362 81045.06 0.10118 5.5209E-05 0.026865 1.4658E-05 0.12805 6.9867E-05 545.625134347612 550.968022296414 17.114 0.25797 17.114 17.005 17.262 1.9073E-06 104 20 8 0 0 0 0.039621 1 3318 20.524 20.524 1 3.5488 3.0544 0 3413200 716230 2696900 37405 1504 14076 14459 58757 58757 VHIDIGADGR 10 0 1 Unmodified _VHIDIGADGR_ 0 0 0 Q53F48;A0A024QZK8;P31942;A0A024QZP1;B4DHY1 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.7819 2 526.777805 1051.54106 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.889 1 39.889 39.389 40.389 0 0 0 0 0.0085984 1 20762 59.35 33.456 1 37406 23 14077 14460 58758 58758 VHIDIGADGR 10 0 1 Unmodified _VHIDIGADGR_ 0 0 0 Q53F48;A0A024QZK8;P31942;A0A024QZP1;B4DHY1 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 531.7822 2 526.777805 1051.54106 83915.62 0.44543 0.00023464 0.27087 0.00014269 0.7163 0.00037733 526.77777354611 531.78207668138 38.565 0.56769 38.565 38.34 38.908 0 196 48 6 0 0 0 1.7051E-06 2 20285 111.46 68.332 1 2.0984 2.3955 0 92242000 26472000 65770000 37407 23 14077 14460 58759;58760 58760 VHIDIGADGR 10 0 1 Unmodified _VHIDIGADGR_ 0 0 0 Q53F48;A0A024QZK8;P31942;A0A024QZP1;B4DHY1 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 531.7819 2 526.777805 1051.54106 82777.23 0.30041 0.00015825 -0.55933 -0.00029465 -0.25892 -0.00013639 526.777759995675 531.781912347647 45.364 0.58229 45.364 45.114 45.696 0 163 41 6 0 0 0 0.0029629 1 21671 66.692 31.884 1 1.6982 1.442 0 5207500 1938600 3268900 37408 23 14077 14460 58761 58761 VHIDIGADGR 10 0 1 Unmodified _VHIDIGADGR_ 0 0 0 Q53F48;A0A024QZK8;P31942;A0A024QZP1;B4DHY1 Q53F48 Q53F48 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 531.7823 2 526.777805 1051.54106 83457.05 0.69907 0.00036825 -0.35304 -0.00018597 0.34603 0.00018228 526.777658297344 531.781825581941 45.174 0.71449 45.174 44.765 45.479 0 165 50 7 0 0 0 0.0032667 2 21009 65.305 29.425 1 1.5637 1.334 0 4544800 1653100 2891700 37409 23 14077 14460 58762;58763 58762 VHIEFTEGEDK 11 1 0 Unmodified _VHIEFTEGEDK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H0Y394;Q6ZS03;Q96CF6;H7C0A4 A0A024R4E5 A0A024R4E5 HDLBP Vigilin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.3187 2 652.311874 1302.6092 NaN NaN NaN -0.579 -0.00037769 NaN NaN NaN NaN 43.64 0.50329 43.64 43.494 43.997 0 0 0 0 0.0013607 1 23728 83.862 58.939 1 NaN NaN 0 13129000 0 13129000 37410 154 14078 14461 58764 58764 VHIEFTEGEDK 11 1 0 Unmodified _VHIEFTEGEDK_ 0 0 0 A0A024R4E5;Q00341;B2R5V9;B4DKR8;H0Y394;Q6ZS03;Q96CF6;H7C0A4 A0A024R4E5 A0A024R4E5 HDLBP Vigilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 652.3128 2 652.311874 1302.6092 73601.15 0.40348 0.00026319 -0.12518 -8.1655E-05 0.2783 0.00018154 652.311535654588 656.319116044544 51.907 0.37569 51.907 51.763 52.139 0 93 26 5 0 0 0 0.055652 1 25005 33.922 31.521 1 1.13 0.9579 0 1456600 762480 694080 37411 154 14078 14461 58765 58765 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51;P55795;B4DFK9;B4DP00 A0A024R7T3;E9PCY7;P55795 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.7977 2 546.793455 1091.57236 82434.05 0.76433 0.00041793 -0.034045 -1.8616E-05 0.73029 0.00039932 546.793345006898 551.797566388083 42.682 1.0217 42.682 42.523 43.545 0 276 84 5 0 0 0 3.9802E-08 2 23004 117.89 104.31 1 1.4643 1.6623 0 109520000 42694000 66829000 37412 1231;234;1617 14079 14462 58766;58767 58767 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51;P55795;B4DFK9;B4DP00 A0A024R7T3;E9PCY7;P55795 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 368.2007 3 364.864729 1091.57236 99651.3 0.21913 7.9952E-05 -0.13282 -4.8463E-05 0.086303 3.1489E-05 364.864639448342 368.200716289389 42.979 0.72517 42.979 42.748 43.473 0 218 59 6 0 0 0 0.0036671 2 23005 50.297 44.264 1 1.4436 1.5451 0 45458000 18202000 27255000 37413 1231;234;1617 14079 14462 58768;58769 58769 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51;P55795;B4DFK9;B4DP00 A0A024R7T3;E9PCY7;P55795 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.7983 2 546.793455 1091.57236 NaN NaN NaN -0.15216 -8.3199E-05 NaN NaN NaN NaN 42.484 0.36721 42.484 42.193 42.56 0 0 0 0 3.8485E-11 1 22463 120.12 66.953 1 NaN NaN 0 49460000 0 49460000 37414 1231;234;1617 14079 14462 58770 58770 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51;P55795;B4DFK9;B4DP00 A0A024R7T3;E9PCY7;P55795 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 368.7096 3 364.864729 1091.57236 99244.42 0.33466 0.00012211 0.16187 5.9061E-05 0.49653 0.00018117 364.864697785309 368.200867895746 42.663 0.353 42.663 42.523 42.876 0 151 29 7 0 0 0 0.026035 1 22766 41.54 41.54 1 1.436 1.5626 0 50904000 20635000 30269000 37415 1231;234;1617 14079 14462 58771 58771 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51;P55795;B4DFK9;B4DP00 A0A024R7T3;E9PCY7;P55795 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.7986 2 546.793455 1091.57236 81725.98 0.76867 0.0004203 0.1106 6.0477E-05 0.87927 0.00048078 546.793352683711 551.79763042284 41.519 1.4774 41.519 40.727 42.204 0 535 126 8 0 0 0 8.4089E-06 3 22089 106.42 94.83 1 1.4124 1.6236 0 199830000 76688000 123140000 37416 1231;234;1617 14079 14462 58772;58773;58774 58773 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51;P55795;B4DFK9;B4DP00 A0A024R7T3;E9PCY7;P55795 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 364.8651 3 364.864729 1091.57236 98866.56 0.43942 0.00016033 0.24319 8.8733E-05 0.68262 0.00024906 364.864703904332 368.200859974523 41.441 1.1712 41.441 40.939 42.11 0 420 102 6 0 0 0 0.0025679 2 22210 56.202 48.645 1 1.4844 1.7018 0 82382000 29497000 52884000 37417 1231;234;1617 14079 14462 58775;58776 58776 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51;P55795;B4DFK9;B4DP00 A0A024R7T3;E9PCY7;P55795 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 368.2005 3 364.864729 1091.57236 100202 -0.087297 -3.1851E-05 0.19231 7.0167E-05 0.10501 3.8315E-05 364.864699543891 368.200787375621 48.802 0.88116 48.802 48.465 49.347 3.8147E-06 231 69 6 0 0 0 0.017285 2 23840 30.392 25.325 1 1.0197 0.87637 0 6502300 3140100 3362100 37418 1231;234;1617 14079 14462 58777;58778 58777 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51;P55795;B4DFK9;B4DP00 A0A024R7T3;E9PCY7;P55795 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.7979 2 546.793455 1091.57236 81251.45 0.22976 0.00012563 0.029386 1.6068E-05 0.25915 0.0001417 546.79326727082 551.797648451397 48.831 1.0735 48.831 48.361 49.434 3.8147E-06 234 78 5 0 0 0 0.0067028 2 23222 58.433 57.859 1 1 0.81178 0 10091000 4823900 5267300 37419 1231;234;1617 14079 14462 58779;58780 58780 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 A0A024R7T3;P52597;B4DKS8;E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51;P55795;B4DFK9;B4DP00 A0A024R7T3;E9PCY7;P55795 E9PCY7 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 364.8645 3 364.864729 1091.57236 100729.9 -0.25558 -9.325E-05 0.097484 3.5568E-05 -0.15809 -5.7682E-05 364.864651920164 368.200785415755 48.871 0.76749 48.871 48.487 49.255 0 263 62 6 0 0 0 0.023835 1 23304 32.731 26.696 1 1.0482 0.89184 0 4593000 2187700 2405300 37420 1231;234;1617 14079 14462 58781 58781 VHIGQVIMSIR 11 0 1 Oxidation (M) _VHIGQVIM(ox)SIR_ VHIGQVIM(1)SIR VHIGQVIM(53.75)SIR 0 1 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.8653 2 634.860815 1267.70708 76870.38 0.66157 0.00042001 0.039429 2.5032E-05 0.701 0.00044504 634.860777913969 639.865057771324 71.739 1.4761 71.739 71.105 72.581 0 399 120 5 0 0 0 0.0032957 3 42239 53.751 53.751 1 1.3954 1.4335 0 25487000 9990800 15496000 37421 1524;1266 14080 14463 58782;58783;58784 58784 972 VHIGQVIMSIR 11 0 1 Oxidation (M) _VHIGQVIM(ox)SIR_ VHIGQVIM(1)SIR VHIGQVIM(48.03)SIR 0 1 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.5764 3 423.576302 1267.70708 88073.09 0.13124 5.559E-05 -0.077915 -3.3003E-05 0.053326 2.2587E-05 423.576239047704 426.912319167423 71.748 1.9167 71.748 71.004 72.921 0 908 153 8 0 0 0 0.0030672 2 42066 48.028 48.028 1 1.4188 1.6412 0 163770000 69611000 94157000 37422 1524;1266 14080 14463 58785;58786 58786 972 VHIGQVIMSIR 11 0 1 Oxidation (M) _VHIGQVIM(ox)SIR_ VHIGQVIM(1)SIR VHIGQVIM(63.32)SIR 0 1 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.5767 3 423.576302 1267.70708 88196.24 -0.028531 -1.2085E-05 0.057236 2.4244E-05 0.028705 1.2159E-05 423.576330239983 426.912397958484 68.922 2.1279 68.922 68.29 70.418 0 937 179 8 0 0 0 0.00050272 2 40841 63.32 63.32 1 1.4305 1.6592 0 316890000 124030000 192860000 37423 1524;1266 14080 14463 58787;58788 58787 972 VHIGQVIMSIR 11 0 1 Oxidation (M) _VHIGQVIM(ox)SIR_ VHIGQVIM(1)SIR VHIGQVIM(45.14)SIR 0 1 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 639.8655 2 634.860815 1267.70708 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.154 1 69.154 68.654 69.654 0 0 0 0 0.017671 1 41141 45.137 25.35 1 37424 1524;1266 14080 14463 58789 58789 972 VHIGQVIMSIR 11 0 1 Unmodified _VHIGQVIMSIR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.2444 3 418.244664 1251.71216 NaN NaN NaN -0.035775 -1.4963E-05 NaN NaN NaN NaN 82.818 0.3989 82.818 82.736 83.135 0 0 0 0 0.0026993 2 50671 60.434 54.242 1 NaN NaN 0 7751500 7751500 0 37425 1524;1266 14080 14464 58790;58791 58791 VHIGQVIMSIR 11 0 1 Unmodified _VHIGQVIMSIR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 421.5807 3 418.244664 1251.71216 90617.47 -0.084415 -3.5306E-05 0.48719 0.00020377 0.40278 0.00016846 418.244759322761 421.580834510535 95.395 0.89903 95.395 95.142 96.041 0 301 63 8 0 0 0 0.023912 2 53366 30.889 30.889 1 1.1837 0.96848 0 13462000 5803600 7658400 37426 1524;1266 14080 14464 58792;58793 58792 VHIGQVIMSIR 11 0 1 Unmodified _VHIGQVIMSIR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 631.8682 2 626.863357 1251.71216 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.306 1 95.306 94.806 95.806 7.6294E-06 0 0 0 0.029573 1 53390 49.189 20.79 1 37427 1524;1266 14080 14464 58794 58794 VHIGQVIMSIR 11 0 1 Unmodified _VHIGQVIMSIR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 421.5809 3 418.244664 1251.71216 92302 -0.33652 -0.00014075 0.46866 0.00019602 0.13215 5.527E-05 418.244824063564 421.580853763147 94.879 0.83849 94.879 94.69 95.528 0 232 57 6 0 0 0 0.026333 2 52223 29.807 29.807 1 1.1499 0.93216 0 10280000 4595500 5684800 37428 1524;1266 14080 14464 58795;58796 58795 VHIGQVIMSIR 11 0 1 Unmodified _VHIGQVIMSIR_ 0 0 0 F8W7C6;A0A087WV22;H7C123;H7C2C5;X1WI28;X5D2T3;P27635;Q96L21 F8W7C6;X1WI28 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 631.8679 2 626.863357 1251.71216 75662.77 0.59034 0.00037006 1.4028 0.00087938 1.9932 0.0012494 626.863613636895 631.866658397601 94.896 0.70905 94.896 94.718 95.427 -7.6294E-06 215 48 7 0 0 0 0.027713 2 52318 47.894 47.894 1 1.469 1.2199 0 7681900 3299400 4382500 37429 1524;1266 14080 14464 58797;58798 58797 VHILDTESFETTFGPK 16 1 0 Unmodified _VHILDTESFETTFGPK_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 610.6461 3 607.640353 1819.89923 78154.13 0.68586 0.00041676 -0.39332 -0.000239 0.29254 0.00017776 607.640020114559 610.645712535878 110.66 0.74416 110.66 110.36 111.1 0 187 34 12 0 0 0 9.6497E-06 2 63950 85.163 85.163 1 1.2886 1.0082 0 16403000 7232900 9169600 37430 1721 14081 14465 58799;58800 58799 VHILDTESFETTFGPK 16 1 0 Unmodified _VHILDTESFETTFGPK_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 914.9613 2 910.956891 1819.89923 64907.48 0.66313 0.00060408 -1.107 -0.0010084 -0.44388 -0.00040436 910.955919198288 914.962338336469 110.72 0.55169 110.72 110.32 110.87 0 59 25 5 0 0 0 0.023918 1 63962 29.341 29.341 1 0.96674 0.75673 0 3215800 1675900 1539900 37431 1721 14081 14465 58801 58801 VHILDTESFETTFGPK 16 1 0 Unmodified _VHILDTESFETTFGPK_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 610.3118 3 607.640353 1819.89923 78599.78 0.65285 0.0003967 -0.4854 -0.00029495 0.16744 0.00010175 607.640119684807 610.311088375192 110.46 0.81371 110.46 110.07 110.88 7.6294E-06 251 42 10 0 0 0 0.00094847 1 62881 38.14 38.14 1 1.2425 0.99738 0 14021000 7433000 6587900 37432 1721 14081 14465 58802 58802 VHILDTESFETTFGPK 16 1 0 Unmodified _VHILDTESFETTFGPK_ 0 0 0 Q5T0F3;Q13823 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 915.4659 2 910.956891 1819.89923 64654.82 0.59394 0.00054106 -1.015 -0.0009246 -0.42103 -0.00038354 911.457054565392 914.962337991088 110.47 0.5004 110.47 110.21 110.71 0 82 26 5 0 0 0 0.0065851 1 62929 45.915 40.422 1 1.2425 0.96944 0 3458500 956830 2501700 37433 1721 14081 14465 58803 58803 VHILGSFQNIK 11 1 0 Unmodified _VHILGSFQNIK_ 0 0 0 B2R823;Q9NRX1 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.3691 2 628.361505 1254.70846 77435.38 0.5306 0.00033341 0.12345 7.7569E-05 0.65405 0.00041098 628.361262015542 632.368379210215 69.444 0.86372 69.444 69.113 69.976 0 342 71 6 0 0 0 0.0017197 2 41272 65.347 65.347 1 1.1227 1.2181 0 39133000 20982000 18151000 37434 858 14082 14466 58804;58805 58804 VHILGSFQNIK 11 1 0 Unmodified _VHILGSFQNIK_ 0 0 0 B2R823;Q9NRX1 B2R823 B2R823 PNO1 RNA-binding protein PNO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.3685 2 628.361505 1254.70846 76224.08 0.43469 0.00027314 0.23879 0.00015005 0.67348 0.00042319 628.361364444495 632.368547902452 80.76 0.85709 80.76 80.417 81.274 -7.6294E-06 288 58 8 0 0 0 0.014335 1 43570 46.891 36.938 1 1.32 1.0395 0 17521000 7978400 9542700 37435 858 14082 14466 58806 58806 VHIPNDDAQFDASHCDSDK 19 1 0 Unmodified _VHIPNDDAQFDASHCDSDK_ 0 0 0 Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP01;C9J7L0 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.8504 3 724.307996 2169.90216 71877.37 0.78084 0.00056557 -0.32039 -0.00023206 0.46045 0.00033351 724.30776278137 727.31373281371 39.48 0.57495 39.48 39.231 39.806 0 261 49 8 0 0 0 0.044954 1 20987 22.571 22.571 1 0.99283 1.0117 0 30849000 16020000 14829000 37436 1771 14083 14467 58807 58807 VHLDLWVK 8 1 0 Unmodified _VHLDLWVK_ 0 0 0 E9PKP7;P17480;A8K962;O00164;B4DLB0;H0YDH7 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.2955 2 505.295102 1008.57565 86274.97 0.39699 0.0002006 -0.005732 -2.8964E-06 0.39126 0.0001977 505.29512283789 509.302119174991 92.116 0.9986 92.116 91.674 92.673 7.6294E-06 258 57 7 0 0 0 0.0065363 2 51269 86.833 86.833 1 1.3884 1.0766 0 13882000 5444500 8437000 37437 1244 14084 14468 58808;58809 58809 VHLDLWVK 8 1 0 Unmodified _VHLDLWVK_ 0 0 0 E9PKP7;P17480;A8K962;O00164;B4DLB0;H0YDH7 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.2955 2 505.295102 1008.57565 85332.92 0.28331 0.00014315 0.18961 9.581E-05 0.47292 0.00023896 505.295165912976 509.302204450602 91.6 1.1788 91.6 91.241 92.42 0 329 72 6 0 0 0 0.0022675 2 50182 101.33 101.33 1 1.4568 1.1999 0 10583000 4771600 5811700 37438 1244 14084 14468 58810;58811 58811 VHLEDVFQLFK 11 1 0 Unmodified _VHLEDVFQLFK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B3KWS1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.3762 2 687.874445 1373.73434 74485.13 0.83302 0.00057301 -0.25037 -0.00017222 0.58265 0.00040079 687.874215897759 691.881410410358 120.86 0.97328 120.86 120.26 121.24 -7.6294E-06 324 68 6 0 0 0 0.0053167 2 77699 56.432 56.432 1 0.96056 0.9435 0 20267000 11611000 8655800 37439 897 14085 14469 58812;58813 58812 VHLEDVFQLFK 11 1 0 Unmodified _VHLEDVFQLFK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B3KWS1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.8743 2 687.874445 1373.73434 74108.09 0.86871 0.00059756 -0.39693 -0.00027304 0.47177 0.00032452 687.874112214356 691.881358184441 119.78 1.0044 119.78 119.29 120.29 0 358 73 6 0 0 0 1.13E-13 1 78824 150.08 150.08 1 0.9776 1.0292 0 23847000 12250000 11596000 37440 897 14085 14469 58814 58814 VHLEDVFQLFK 11 1 0 Unmodified _VHLEDVFQLFK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B3KWS1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.8745 2 687.874445 1373.73434 73543.88 0.5632 0.00038741 0.41163 0.00028315 0.97483 0.00067056 687.874463298138 691.881706141438 131.13 0.97177 131.13 130.82 131.79 0 197 43 9 0 0 0 0.000286 1 79544 89.08 89.08 1 1.1253 0.89302 0 18934000 7849200 11085000 37441 897 14085 14469 58815 58815 VHLEDVFQLFK 11 1 0 Unmodified _VHLEDVFQLFK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B3KWS1 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.8744 2 687.874445 1373.73434 73405.01 0.88069 0.00060581 0.1446 9.947E-05 1.0253 0.00070527 687.874477634315 691.881634012425 130.76 0.73969 130.76 130.52 131.26 -1.5259E-05 166 32 7 0 0 0 0.00016523 1 78434 94.309 94.309 1 1.127 0.93481 0 35643000 16299000 19344000 37442 897 14085 14469 58816 58816 VHLLCLLANGFYR 13 0 1 Unmodified _VHLLCLLANGFYR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.9545 3 525.953661 1574.83915 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.73 1 116.73 116.23 117.23 0 0 0 0 0.038502 1 74589 51.979 40.186 1 37443 118 14086 14470 58817 58817 VHLLCLLANGFYR 13 0 1 Unmodified _VHLLCLLANGFYR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.2902 3 525.953661 1574.83915 85925.66 0.58919 0.00030989 -0.10314 -5.4248E-05 0.48605 0.00025564 526.287817450155 529.289862348064 115.56 0.67053 115.56 115.26 115.93 0 81 43 4 0 0 0 4.125E-05 1 75261 59.418 59.418 1 0.41439 0.41844 0 5625600 3337300 2288300 37444 118 14086 14470 58818 58818 VHLLCLLANGFYR 13 0 1 Unmodified _VHLLCLLANGFYR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.9539 3 525.953661 1574.83915 NaN NaN NaN -0.19175 -0.00010085 NaN NaN NaN NaN 115.35 0.42082 115.35 115.09 115.52 0 0 0 0 0.01874 1 75167 38.58 33.95 1 NaN NaN 0 2445800 2445800 0 37445 118 14086 14470 58819 58819 VHLLCLLANGFYR 13 0 1 Unmodified _VHLLCLLANGFYR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.9541 3 525.953661 1574.83915 82877.55 0.47499 0.00024982 -0.14003 -7.3651E-05 0.33495 0.00017617 525.953676398735 529.289630134824 124.86 0.56623 124.86 124.68 125.25 0 122 25 8 0 0 0 0.0031168 1 74820 42.031 42.031 1 0.85236 0.72934 0 5947000 3168400 2778700 37446 118 14086 14470 58820 58820 VHLLCLLANGFYR 13 0 1 Unmodified _VHLLCLLANGFYR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPI9;D2CPJ0 A0A024R2M8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.2893 3 525.953661 1574.83915 83163.66 0.53842 0.00028318 -0.16085 -8.4602E-05 0.37757 0.00019858 525.953727777682 529.289684118092 124.55 0.68739 124.55 124.39 125.08 0 125 32 7 0 0 0 0.0014467 1 73745 30.068 30.068 1 0.91151 0.79622 0 4226200 1969900 2256300 37447 118 14086 14470 58821 58821 VHLLGR 6 0 1 Unmodified _VHLLGR_ 0 0 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 347.7214 2 347.721573 693.428593 102068.1 0.35903 0.00012484 -0.030057 -1.0451E-05 0.32897 0.00011439 347.721486175161 352.725584624182 28.056 0.69693 28.056 27.732 28.429 0 173 47 6 0 0 0 0.037494 1 13112 123.06 68.162 1 0.85696 0.98204 0 133270000 65748000 67521000 37448 666 14087 14471 58822 58822 VHLLGR 6 0 1 Unmodified _VHLLGR_ 0 0 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 347.7215 2 347.721573 693.428593 100666 0.29715 0.00010333 0.095237 3.3116E-05 0.39239 0.00013644 347.721536355863 352.725590252517 26.954 0.61525 26.954 26.786 27.401 0 102 30 8 0 0 0 0.025304 1 12282 130.51 53.982 1 0.84806 0.9803 0 259550000 141080000 118470000 37449 666 14087 14471 58823 58823 VHLLGR 6 0 1 Unmodified _VHLLGR_ 0 0 0 Q567R6;A4D1U3;Q04837;A0A0G2JLD8;E7EUY5;B7Z268;C9K0U8 Q567R6 Q567R6 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 347.7214 2 347.721573 693.428593 102620.3 -0.36633 -0.00012738 0.34322 0.00011935 -0.02311 -8.0358E-06 347.721608450856 352.725697763547 30.122 0.59889 30.122 29.856 30.455 1.9073E-06 160 37 6 0 0 0 0.063344 1 11891 85.176 42.611 1 0.70709 0.58878 0 6245600 3726600 2518900 37450 666 14087 14471 58824 58824 VHLPSSIYR 9 0 1 Unmodified _VHLPSSIYR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.3051 2 536.300916 1070.58728 88712.43 0.21066 0.00011298 -0.15432 -8.2762E-05 0.056344 3.0218E-05 536.300522218715 541.305054111186 53.004 0.37165 53.004 52.773 53.144 0 104 27 6 0 0 0 0.035569 1 29511 43.808 34.885 1 1.389 1.4446 0 20994000 7010100 13983000 37451 1102 14088 14472 58825 58825 VHLVGIDIFTGK 12 1 0 Unmodified _VHLVGIDIFTGK_ 0 0 0 I3L397;I3L504;P63241;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.8852 2 649.876988 1297.73942 72747.49 0.85381 0.00055487 0.30429 0.00019775 1.1581 0.00075263 650.378880378809 653.884243422986 105.83 0.89346 105.83 105.7 106.59 0 163 65 5 0 0 0 0.00020844 1 65716 97.813 97.813 1 3.1703 3.2902 0 29454000 5425500 24029000 37452 1322 14089 14473 58826 58826 VHLVGIDIFTGK 12 1 0 Unmodified _VHLVGIDIFTGK_ 0 0 0 I3L397;I3L504;P63241;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.2583 3 433.587084 1297.73942 NaN NaN NaN -0.042703 -1.8515E-05 NaN NaN NaN NaN 105.48 0.42368 105.48 105.27 105.7 0 0 0 0 0.0041041 1 65258 53.569 47.726 1 NaN NaN 0 12160000 0 12160000 37453 1322 14089 14473 58827 58827 VHLVGIDIFTGK 12 1 0 Unmodified _VHLVGIDIFTGK_ 0 0 0 I3L397;I3L504;P63241;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.8836 2 649.876988 1297.73942 74536.63 0.51098 0.00033207 0.1386 9.0071E-05 0.64957 0.00042214 649.876803767854 653.884049866866 103.52 0.92928 103.52 103.23 104.15 7.6294E-06 387 79 6 0 0 0 0.00029655 3 65884 91.658 91.658 1 3.4239 3.8403 0 113890000 21988000 91903000 37454 1322 14089 14473 58828;58829;58830 58830 VHLVGIDIFTGK 12 1 0 Unmodified _VHLVGIDIFTGK_ 0 0 0 I3L397;I3L504;P63241;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.2584 3 433.587084 1297.73942 92675.81 -0.15747 -6.8277E-05 -0.24212 -0.00010498 -0.39959 -0.00017326 433.587122083778 436.25816535142 103.75 0.96755 103.75 103.34 104.31 0 243 82 5 0 0 0 0.00067711 2 65425 59.198 59.198 1 3.1214 3.2563 0 19175000 5112300 14063000 37455 1322 14089 14473 58831;58832 58831 VHLVGIDIFTGK 12 1 0 Unmodified _VHLVGIDIFTGK_ 0 0 0 I3L397;I3L504;P63241;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.885 2 649.876988 1297.73942 75706.25 0.93572 0.0006081 0.18493 0.00012018 1.1206 0.00072828 649.877156959137 653.884160499734 115 0.64722 115 114.8 115.45 -7.6294E-06 153 29 8 0 0 0 4.5873E-07 1 67244 136.96 129.68 1 2.2618 1.8331 0 24847000 8578200 16269000 37456 1322 14089 14473 58833 58833 VHLVGIDIFTGK 12 1 0 Unmodified _VHLVGIDIFTGK_ 0 0 0 I3L397;I3L504;P63241;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.8867 2 649.876988 1297.73942 76137.94 0.74513 0.00048424 0.1699 0.00011041 0.91503 0.00059465 649.87705174912 653.884194539131 114.79 0.76029 114.79 114.5 115.26 0 155 34 7 0 0 0 0.0034945 1 66079 70.808 66.509 1 2.0504 1.6927 0 31009000 11295000 19714000 37457 1322 14089 14473 58834 58834 VHPAVVIR 8 0 1 Unmodified _VHPAVVIR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3;C9JD32;J3QQT9 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 445.7823 2 445.782162 889.549771 89018.42 -0.15778 -7.0336E-05 0.26892 0.00011988 0.11114 4.9545E-05 445.782291539839 450.786317517712 29.284 0.60859 29.284 29.069 29.677 0 311 45 9 0 0 0 0.0056789 1 14048 89.703 79.566 1 0.79127 0.94154 0 1533900000 815850000 718040000 37458 84 14090 14474 58835 58835 VHPAVVIR 8 0 1 Unmodified _VHPAVVIR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3;C9JD32;J3QQT9 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 300.8597 3 297.523867 889.549771 110253 -0.34521 -0.00010271 0.83149 0.00024739 0.48628 0.00014468 297.523987420323 300.86008975749 29.281 0.4693 29.281 29.106 29.575 0 153 35 6 0 0 0 0.0039118 1 14084 58.981 51.414 1 0.79411 0.87995 0 64440000 32320000 32120000 37459 84 14090 14474 58836 58836 VHPAVVIR 8 0 1 Unmodified _VHPAVVIR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3;C9JD32;J3QQT9 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.7867 2 445.782162 889.549771 93211.88 -0.059078 -2.6336E-05 0.58255 0.00025969 0.52348 0.00023336 445.782527743031 450.78648078689 30.017 1.0217 30.017 29.664 30.686 -1.9073E-06 200 89 4 0 0 0 0.031924 1 14585 50.966 29.419 1 0.76454 0.77812 0 29887000 14188000 15699000 37460 84 14090 14474 58837 58837 VHPAVVIR 8 0 1 Unmodified _VHPAVVIR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3;C9JD32;J3QQT9 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 445.7827 2 445.782162 889.549771 90943.17 0.12778 5.6963E-05 0.16378 7.301E-05 0.29156 0.00012997 445.782250664767 450.786266202417 28.322 0.8119 28.322 28.149 28.961 -1.9073E-06 394 66 10 0 0 0 0.0071781 2 13473 84.064 84.064 1 0.74562 0.88001 0 1291900000 668370000 623520000 37461 84 14090 14474 58838;58839 58839 VHPAVVIR 8 0 1 Unmodified _VHPAVVIR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3;C9JD32;J3QQT9 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 300.8603 3 297.523867 889.549771 111660 0.38102 0.00011336 0.18057 5.3722E-05 0.56158 0.00016708 297.523844329353 300.859939103285 28.324 0.50965 28.324 28.172 28.682 1.9073E-06 151 37 6 0 0 0 0.0014569 1 13487 81.784 71.873 1 0.83602 0.96298 0 73480000 39030000 34450000 37462 84 14090 14474 58840 58840 VHPAVVIR 8 0 1 Unmodified _VHPAVVIR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3;C9JD32;J3QQT9 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 445.7821 2 445.782162 889.549771 NaN NaN NaN 0.25885 0.00011539 NaN NaN NaN NaN 29.072 0.31024 29.072 28.961 29.271 0 0 0 0 0.024367 1 13931 62.714 39.979 1 NaN NaN 0 48242000 48242000 0 37463 84 14090 14474 58841 58841 VHPAVVIR 8 0 1 Unmodified _VHPAVVIR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3;C9JD32;J3QQT9 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 445.7821 2 445.782162 889.549771 90300.62 -0.12 -5.3495E-05 -0.13879 -6.1868E-05 -0.25879 -0.00011536 445.782296211916 450.786107586186 32.927 1.443 32.927 32.749 34.192 0 426 118 10 0 0 0 0.014565 2 14300 62.714 53.942 1 1.638 1.428 0 426090000 156420000 269660000 37464 84 14090 14474 58842;58843 58843 VHPAVVIR 8 0 1 Unmodified _VHPAVVIR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3;C9JD32;J3QQT9 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 300.8598 3 297.523867 889.549771 110078.7 -0.29387 -8.7432E-05 0.30059 8.9433E-05 0.0067249 2.0008E-06 297.523861748507 300.859928040914 32.928 0.39481 32.928 32.796 33.191 0 93 25 7 0 0 0 0.0074457 1 14348 47.743 40.175 1 1.6471 1.3583 0 18601000 6439500 12161000 37465 84 14090 14474 58844 58844 VHPAVVIR 8 0 1 Unmodified _VHPAVVIR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3;C9JD32;J3QQT9 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 445.7819 2 445.782162 889.549771 87909.06 -0.0042687 -1.9029E-06 -0.56933 -0.0002538 -0.5736 -0.0002557 445.782293545492 450.7858413952 32.89 0.50064 32.89 32.736 33.236 0 136 29 9 0 0 0 0.0052246 2 13771 91.14 79.491 1 1.5893 1.3891 0 467790000 177180000 290610000 37466 84 14090 14474 58845;58846 58846 VHPAVVIR 8 0 1 Unmodified _VHPAVVIR_ 0 0 0 Q9BTQ7;A0A024R1Q8;P62829;J3KT29;J3KTJ3;C9JD32;J3QQT9 Q9BTQ7 Q9BTQ7 RPL23 60S ribosomal protein L23 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 300.86 3 297.523867 889.549771 110348.3 -0.18474 -5.4964E-05 0.24494 7.2875E-05 0.060201 1.7911E-05 297.52382766286 300.85996219159 32.888 0.27576 32.888 32.736 33.012 0 51 11 7 0 0 0 0.0057606 1 13799 50.632 43.064 1 2.0156 1.6989 0 17599000 5984000 11615000 37467 84 14090 14474 58847 58847 VHSDFTAAATR 11 0 1 Unmodified _VHSDFTAAATR_ 0 0 0 I3L2B0;K7EIG1;O75153 I3L2B0 I3L2B0 CLUH Clustered mitochondria protein homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.2985 2 588.293819 1174.57309 NaN NaN NaN -0.15742 -9.2608E-05 NaN NaN NaN NaN 23.982 0.22208 23.982 23.873 24.095 -1.9073E-06 0 0 0 7.2104E-05 1 9792 96.342 71.419 1 NaN NaN 0 9505000 0 9505000 37468 1321 14091 14475 58848 58848 VHSEVASLQEK 11 1 0 Unmodified _VHSEVASLQEK_ 0 0 0 Q9Y305;Q9H2R8 Q9Y305 Q9Y305 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 617.8301 2 613.822409 1225.63027 NaN NaN NaN 0.33728 0.00020703 NaN NaN NaN NaN 22.948 0.2926 22.948 22.791 23.084 0 0 0 0 4.7849E-79 1 8806 211.78 160.43 1 NaN NaN 0 24384000 0 24384000 37469 2130 14092 14476 58849 58849 VHSEVASLQEK 11 1 0 Unmodified _VHSEVASLQEK_ 0 0 0 Q9Y305;Q9H2R8 Q9Y305 Q9Y305 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.8301 2 613.822409 1225.63027 NaN NaN NaN 0.24852 0.00015255 NaN NaN NaN NaN 25.561 0.34721 25.561 25.414 25.761 0 0 0 0 0.0015808 1 9365 82.261 43.239 1 NaN NaN 0 1099900 0 1099900 37470 2130 14092 14476 58850 58850 VHSFTHEAPNQR 12 0 1 Unmodified _VHSFTHEAPNQR_ 0 0 0 A0A087X295;Q9NNW5;E9PDU5;B4E256;Q8NDH0;B3KRR8;E9PBK6;B4DLP3;Q6PKC6;Q6AZD6;Q9H9M3 A0A087X295 A0A087X295 WDR6;DKFZp434F1720 WD repeat-containing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.9005 3 474.900613 1421.68001 86758.93 0.30853 0.00014652 0.72944 0.00034641 1.038 0.00049293 474.900906173074 478.236928812023 16.835 0.21086 16.835 16.748 16.959 1.9073E-06 26 7 6 0 0 0 0.0037697 2 3917 36.847 34.942 1 1.0727 1.155 0 3092500 1423700 1668800 37471 451 14093 14477 58851;58852 58851 VHSPSGALEECYVTEIDQDK 20 1 0 Unmodified _VHSPSGALEECYVTEIDQDK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 762.6897 3 759.68284 2276.02669 NaN NaN NaN -0.03858 -2.9308E-05 NaN NaN NaN NaN 89.473 0.53558 89.473 89.231 89.766 0 0 0 0 0.00088547 1 49412 41.912 38.364 1 NaN NaN 0 3332700 0 3332700 37472 1504 14094 14478 58853 58853 VHSPSGALEECYVTEIDQDK 20 1 0 Unmodified _VHSPSGALEECYVTEIDQDK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.6882 3 759.68284 2276.02669 70677.23 0.42263 0.00032106 -0.025717 -1.9537E-05 0.39691 0.00030153 760.01734008534 762.688390335833 89.363 0.5159 89.363 89.077 89.592 0 124 31 6 0 0 0 5.8496E-05 1 48453 26.84 26.682 1 4.6694 3.6592 0 3334000 914240 2419800 37473 1504 14094 14478 58854 58854 VHVIFNYK 8 1 0 Unmodified _VHVIFNYK_ 0 0 0 B4DHR1;Q53G71;V9HW88;P27797;K7EJB9;B4E2Y9 B4DHR1 B4DHR1 HEL-S-99n;CALR Calreticulin ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.2882 2 510.287277 1018.56 NaN NaN NaN 0.62924 0.00032109 NaN NaN NaN NaN 60.248 0.23349 60.248 60.102 60.335 3.8147E-06 0 0 0 0.051482 1 30811 49.358 33.156 1 NaN NaN 0 1144400 1144400 0 37474 978 14095 14479 58855 58855 VHVPARPYR 9 0 2 Unmodified _VHVPARPYR_ 0 0 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.5456 3 365.545442 1093.6145 98188.69 -0.29583 -0.00010814 0.10308 3.7679E-05 -0.19275 -7.0459E-05 365.545464706278 372.217606099683 23.313 0.4538 23.313 23.145 23.599 0 81 21 6 0 0 0 4.2301E-05 2 9185 96.253 84.659 1 1.6114 1.7476 0 26829000 10475000 16354000 37475 1569;1864 14096 14480 58856;58857 58856 VHVPARPYR 9 0 2 Unmodified _VHVPARPYR_ 0 0 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 365.5457 3 365.545442 1093.6145 97244.92 -0.042963 -1.5705E-05 0.32932 0.00012038 0.28636 0.00010468 365.54543059536 372.217755372385 21.016 0.48377 21.016 20.697 21.18 0 95 21 7 0 0 0 0.0040489 2 7184 51.346 45.565 1 1.4808 1.6662 0 28685000 11953000 16732000 37476 1569;1864 14096 14480 58858;58859 58858 VIAGLYQR 8 0 1 Unmodified _VIAGLYQR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.272 2 460.271627 918.528701 86387.2 0.34092 0.00015691 0.35378 0.00016283 0.69469 0.00031975 460.27139155887 465.276256860129 46.477 0.69257 46.477 46.098 46.79 3.8147E-06 211 54 6 0 0 0 0.030997 1 25636 51.572 33.724 1 0.93136 1.0592 0 118910000 61891000 57022000 37477 1665 14097 14481 58860 58860 VIAGLYQR 8 0 1 Unmodified _VIAGLYQR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.2714 2 460.271627 918.528701 88393.99 0.35504 0.00016342 -0.10674 -4.913E-05 0.2483 0.00011429 460.2713673204 465.275781370975 54.243 0.77322 54.243 53.902 54.675 -3.8147E-06 267 59 7 0 0 0 0.059997 1 26994 40.103 23.809 1 0.45982 0.39538 0 6752200 4494200 2258000 37478 1665 14097 14481 58861 58861 VIAHTQMR 8 0 1 Unmodified _VIAHTQMR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2 P39023 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 319.1761 3 319.17625 954.50692 105735.8 -0.01299 -4.1462E-06 0.16933 5.4045E-05 0.15634 4.9899E-05 319.176233701469 322.512270717039 17.463 0.49546 17.463 17.344 17.84 0 50 18 6 0 0 0 0.0024661 2 4626 81.191 53.937 1 0.6303 0.66004 0 12620000 7785600 4834600 37479 1554 14098 14482 58862;58863 58862 VIAHTQMR 8 0 1 Unmodified _VIAHTQMR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2 P39023 P39023 RPL3;rpl3 60S ribosomal protein L3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 319.1764 3 319.17625 954.50692 NaN NaN NaN -0.014606 -4.6619E-06 NaN NaN NaN NaN 17.361 0.28701 17.361 17.248 17.535 0 0 0 0 0.014318 1 4329 43.769 18.826 1 NaN NaN 0 2857700 2857700 0 37480 1554 14098 14482 58864 58864 VIAHTQMR 8 0 1 Unmodified _VIAHTQMR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2 P39023 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.2606 2 478.260736 954.50692 85173.78 -0.17697 -8.4639E-05 0.56582 0.00027061 0.38884 0.00018597 478.260843376747 483.265100604016 18.313 0.33998 18.313 18.181 18.521 0 73 16 7 0 0 0 0.0083247 2 4369 79.116 61.73 1 1.1126 0.94474 0 5202700 2428200 2774500 37481 1554 14098 14482 58865;58866 58866 VIAHTQMR 8 0 1 Unmodified _VIAHTQMR_ 0 0 0 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63;H7C422;H7C3M2;B5MCW2 P39023 P39023 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 319.1763 3 319.17625 954.50692 104606 -0.42926 -0.00013701 0.51135 0.00016321 0.082091 2.6202E-05 319.176313932462 322.512438199419 18.312 0.41027 18.312 18.181 18.592 0 69 19 7 0 0 0 0.048063 1 4398 20.7 5.5493 1 1.086 0.93372 0 6713200 3195400 3517800 37482 1554 14098 14482 58867 58867 VIAPNPAQLQGQR 13 0 1 Unmodified _VIAPNPAQLQGQR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3958 2 696.391325 1390.7681 73584.49 0.84242 0.00058665 -0.8068 -0.00056185 0.035623 2.4808E-05 696.390872190953 701.395058639438 58.247 0.38411 58.247 58.129 58.513 -3.8147E-06 101 26 8 0 0 0 9.2447E-09 1 33796 115.86 115.86 1 0.81167 0.92407 0 109980000 59005000 50972000 37483 591 14099 14483 58868 58868 VIAPNPAQLQGQR 13 0 1 Unmodified _VIAPNPAQLQGQR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.8973 2 696.391325 1390.7681 74227.84 0.41782 0.00029096 -0.44703 -0.00031131 -0.029215 -2.0345E-05 696.39132126219 701.394983981425 68.969 0.66507 68.969 68.712 69.377 0 213 46 7 0 0 0 0.00033757 1 36009 63.816 63.816 1 2.2179 1.908 0 6989900 2304000 4685900 37484 591 14099 14483 58869 58869 VIAPNPAQLQGQR 13 0 1 Unmodified _VIAPNPAQLQGQR_ 0 0 0 A0A0U1RRM1;Q8WXI9;B3KSZ4;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 701.3953 2 696.391325 1390.7681 74356.42 0.52385 0.0003648 -0.62715 -0.00043674 -0.1033 -7.1935E-05 696.391132482932 701.394867227128 69.505 0.63732 69.505 69.227 69.864 0 189 43 6 0 0 0 0.00024384 1 35538 68.371 68.371 1 2.0537 1.7103 0 6261100 2039300 4221800 37485 591 14099 14483 58870 58870 VIAQLSECEK 10 1 0 Unmodified _VIAQLSECEK_ 0 0 0 Q92878 Q92878 Q92878 RAD50 DNA repair protein RAD50 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 588.8005 2 588.800088 1175.58562 NaN NaN NaN 0.22747 0.00013393 NaN NaN NaN NaN 38.747 0.17014 38.747 38.592 38.763 0 0 0 0 0.049829 1 20390 46.819 30.616 1 NaN NaN 0 3715200 3715200 0 37486 1953 14100 14484 58871 58871 VIDDTNITR 9 0 1 Unmodified _VIDDTNITR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.7815 2 523.77747 1045.54039 83214.71 0.40486 0.00021206 0.0044938 2.3537E-06 0.40935 0.00021441 523.777423034248 528.781532049778 35.008 1.1827 35.008 34.491 35.674 0 581 104 8 0 0 0 2.3878E-05 4 17358 114.89 57.335 1 1.0581 1.2527 0 379880000 175960000 203920000 37487 316 14101 14485 58872;58873;58874;58875 58872 VIDDTNITR 9 0 1 Unmodified _VIDDTNITR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.7816 2 523.77747 1045.54039 83375.24 0.64746 0.00033912 0.0064432 3.3748E-06 0.6539 0.0003425 523.777432882 528.781549147745 34.253 0.83963 34.253 33.893 34.733 -3.8147E-06 339 65 8 0 0 0 0.00042467 2 17137 99.442 50.083 1 1.1074 1.2928 0 534180000 267600000 266580000 37488 316 14101 14485 58876;58877 58876 VIDDTNITR 9 0 1 Unmodified _VIDDTNITR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.7816 2 523.77747 1045.54039 83915.91 0.086309 4.5207E-05 0.31751 0.00016631 0.40382 0.00021151 523.777574168404 528.781687146306 39.87 0.84599 39.87 39.53 40.376 0 361 63 8 0 0 0 0.0091583 2 18175 60.436 21.645 1 1.5884 1.3655 0 44363000 16939000 27424000 37489 316 14101 14485 58878;58879 58878 VIDDTNITR 9 0 1 Unmodified _VIDDTNITR_ 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 528.7818 2 523.77747 1045.54039 84402.48 0.12989 6.8031E-05 0.26478 0.00013869 0.39467 0.00020672 523.777485623787 528.781669798595 40.025 1.1795 40.025 39.657 40.837 0 414 98 8 0 0 0 0.015205 2 17776 54.982 14.624 1 1.5613 1.3619 0 40680000 16667000 24013000 37490 316 14101 14485 58880;58881 58881 VIDFDENTALDDAEEESFR 19 0 1 Unmodified _VIDFDENTALDDAEEESFR_ 0 0 0 Q14257;H0YL43 Q14257 Q14257 RCN2 Reticulocalbin-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1113.0635 2 1107.9873 2213.96005 NaN NaN NaN -0.068085 -7.5437E-05 NaN NaN NaN NaN 107.74 0.27744 107.74 107.55 107.82 0 0 0 0 0.024875 1 67096 34.685 31.818 1 NaN NaN 0 3379900 0 3379900 37491 1730 14102 14486 58882 58882 VIDFDENTALDDAEEESFR 19 0 1 Unmodified _VIDFDENTALDDAEEESFR_ 0 0 0 Q14257;H0YL43 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1112.9916 2 1107.9873 2213.96005 60158.74 0.37769 0.00041847 -0.37291 -0.00041318 0.0047774 5.2933E-06 1108.48852468901 1113.4927192008 107.25 0.21937 107.25 107.14 107.35 0 46 14 5 0 0 0 0.0048887 1 68505 32.068 29.281 1 1.3734 1.3667 0 7859700 3409300 4450400 37492 1730 14102 14486 58883 58883 VIDFDENTALDDAEEESFRK 20 1 1 Unmodified _VIDFDENTALDDAEEESFRK_ 0 0 1 Q14257;H0YL43 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.0361 3 781.692281 2342.05501 68514.22 0.70942 0.00055455 -0.61647 -0.00048189 0.092959 7.2665E-05 782.025540304913 787.699906342703 94.491 1.0018 94.491 94.165 95.167 0 392 90 9 0 0 0 1.4701E-09 4 57276 92.492 92.492 1 1.2672 1.5209 0 61675000 26104000 35571000 37493 1730 14103 14487 58884;58885;58886;58887 58885 VIDFDENTALDDAEEESFRK 20 1 1 Unmodified _VIDFDENTALDDAEEESFRK_ 0 0 1 Q14257;H0YL43 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.7016 3 781.692281 2342.05501 68210.81 0.65195 0.00050963 -0.61829 -0.00048331 0.033666 2.6316E-05 782.025720207521 787.69994817 93.754 1.0352 93.754 93.293 94.328 0 474 91 8 0 0 0 0.0015298 2 58024 26.956 26.956 1 1.0736 1.2638 0 83266000 42771000 40494000 37494 1730 14103 14487 58888;58889 58889 VIDFDENTALDDAEEESFRK 20 1 1 Unmodified _VIDFDENTALDDAEEESFRK_ 0 0 1 Q14257;H0YL43 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 787.7015 3 781.692281 2342.05501 68129.98 0.77024 0.00060209 -0.22699 -0.00017744 0.54325 0.00042465 782.026157543189 787.700022542745 107.95 0.51228 107.95 107.7 108.22 0 217 28 10 0 0 0 1.4037E-06 2 61852 55.763 55.763 1 1.1616 1.0059 0 15586000 6560700 9025400 37495 1730 14103 14487 58890;58891 58890 VIDFDENTALDDAEEESFRK 20 1 1 Unmodified _VIDFDENTALDDAEEESFRK_ 0 0 1 Q14257;H0YL43 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 782.0257 3 781.692281 2342.05501 68254.09 0.65263 0.00051016 -0.30395 -0.0002376 0.34868 0.00027256 782.026320833651 788.034278583854 108.07 0.91816 108.07 107.67 108.59 0 221 44 9 0 0 0 0.056644 1 61007 7.2761 7.2761 1 1.3891 1.175 0 10830000 3984900 6844700 37496 1730 14103 14487 58892 58892 VIDPATATSVDLR 13 0 1 Unmodified _VIDPATATSVDLR_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2F4;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 684.3752 2 679.369724 1356.72489 NaN NaN NaN 0.71369 0.00048486 NaN NaN NaN NaN 78.305 0.43769 78.305 78.133 78.571 0 0 0 0 1.5567E-05 1 47445 94.297 65.898 1 NaN NaN 0 18901000 0 18901000 37497 721 14104 14488 58893 58893 VIDPATATSVDLR 13 0 1 Unmodified _VIDPATATSVDLR_ 0 0 0 B7Z9L0;A8K3C3;P50991;B7Z2F4;B7Z2Z8 B7Z9L0 B7Z9L0 CCT4 T-complex protein 1 subunit delta ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.3757 2 679.369724 1356.72489 NaN NaN NaN 0.35792 0.00024316 NaN NaN NaN NaN 90.658 0.30159 90.658 90.465 90.767 0 0 0 0 0.02396 1 49378 45.879 33.252 1 NaN NaN 0 1699600 0 1699600 37498 721 14104 14488 58894 58894 VIDPVAPR 8 0 1 Unmodified _VIDPVAPR_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.7578 2 433.758352 865.502152 90513.94 0.22731 9.8597E-05 -1.0541 -0.00045723 -0.82681 -0.00035863 433.757568273772 438.762113938691 42.93 0.9486 42.93 42.391 43.339 0 210 79 5 0 0 0 0.009492 2 23204 74.415 51.4 1 1.824 2.0225 0 42663000 14834000 27829000 37499 1454 14105 14489 58895;58896 58895 VIDQQNGLYR 10 0 1 Unmodified _VIDQQNGLYR_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.3163 2 603.317294 1204.62004 78473.41 0.7059 0.00042588 -0.23658 -0.00014273 0.46932 0.00028315 603.317083631985 608.321515587968 37.579 0.6444 37.579 37.217 37.862 0 148 53 5 0 0 0 6.4475E-06 4 19116 107.9 107.9 1 0.58037 0.61044 0 11328000 7081300 4246700 37500 1525 14106 14490 58897;58898;58899;58900 58898 VIDQQNGLYR 10 0 1 Unmodified _VIDQQNGLYR_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.3172 2 603.317294 1204.62004 77834.26 0.57537 0.00034713 -0.38507 -0.00023232 0.1903 0.00011481 603.317104310817 608.822245632501 36.718 0.47601 36.718 36.461 36.937 0 89 34 5 0 0 0 3.5718E-05 2 18964 99.442 99.442 1 0.52197 0.51349 0 13386000 9996900 3388800 37501 1525 14106 14490 58901;58902 58902 VIDQQNGLYR 10 0 1 Unmodified _VIDQQNGLYR_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.3177 2 603.317294 1204.62004 78155.16 0.49111 0.0002963 0.048672 2.9365E-05 0.53978 0.00032566 603.317114946758 608.321605313644 42.939 0.46503 42.939 42.787 43.252 3.8147E-06 91 29 5 0 0 0 0.00019859 1 20176 94.114 84.757 1 0.32473 0.28633 0 1404600 949890 454720 37502 1525 14106 14490 58903 58903 VIDRFDEGEDGEGDFLVVGSIR 22 0 2 Unmodified _VIDRFDEGEDGEGDFLVVGSIR_ 0 0 1 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.7341 3 808.727437 2423.16048 67381.39 0.76666 0.00062002 -0.26979 -0.00021818 0.49687 0.00040184 809.061474223512 815.399128917383 108.01 1.204 108.01 107.68 108.88 0 392 87 8 0 0 0 1.9041E-11 4 67333 88.555 88.555 1 0.9025 0.98001 0 31279000 17469000 13810000 37503 2080 14107 14491 58904;58905;58906;58907 58907 VIDRFDEGEDGEGDFLVVGSIR 22 0 2 Unmodified _VIDRFDEGEDGEGDFLVVGSIR_ 0 0 1 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 809.0615 3 808.727437 2423.16048 67111.12 0.79013 0.000639 -0.29551 -0.00023899 0.49462 0.00040001 809.061493049768 815.733705394237 107.27 0.82483 107.27 106.97 107.79 7.6294E-06 237 55 6 0 0 0 5.8833E-09 1 68352 77.576 77.576 1 0.85876 0.98222 0 46492000 23289000 23203000 37504 2080 14107 14491 58908 58908 VIDRFDEGEDGEGDFLVVGSIR 22 0 2 Unmodified _VIDRFDEGEDGEGDFLVVGSIR_ 0 0 1 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 809.0628 3 808.727437 2423.16048 66267.44 0.79619 0.0006439 0.094598 7.6504E-05 0.89079 0.00072041 809.061951971753 815.733719432838 118.42 1.073 118.42 118.16 119.23 -7.6294E-06 275 49 8 0 0 0 3.2034E-05 1 69837 38.237 38.237 1 1.2372 1.0185 0 26807000 14330000 12477000 37505 2080 14107 14491 58909 58909 VIDRFDEGEDGEGDFLVVGSIR 22 0 2 Unmodified _VIDRFDEGEDGEGDFLVVGSIR_ 0 0 1 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 809.0623 3 808.727437 2423.16048 66244.13 0.69038 0.00055833 -0.15857 -0.00012824 0.53181 0.00043009 809.061817057445 815.733845174855 118.22 1.0052 118.22 117.93 118.94 -7.6294E-06 204 47 7 0 0 0 3.5681E-05 2 68819 36.935 36.935 1 1.2326 1.1414 0 21439000 9330100 12109000 37506 2080 14107 14491 58910;58911 58911 VIDSSDVVVQVLDAR 15 0 1 Unmodified _VIDSSDVVVQVLDAR_ 0 0 0 Q5T0F3;Q13823;B4DPI9 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.9388 2 807.938502 1613.86245 NaN NaN NaN 0.087544 7.073E-05 NaN NaN NaN NaN 113.22 0.53465 113.22 112.95 113.48 0 0 0 0 7.4689E-07 1 71467 96.745 80.855 1 NaN NaN 0 14348000 14348000 0 37507 1721 14108 14492 58912 58912 VIDSSDVVVQVLDAR 15 0 1 Unmodified _VIDSSDVVVQVLDAR_ 0 0 0 Q5T0F3;Q13823;B4DPI9 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.9391 2 807.938502 1613.86245 NaN NaN NaN 0.55727 0.00045024 NaN NaN NaN NaN 112.66 0.55477 112.66 112.38 112.94 -7.6294E-06 0 0 0 3.3755E-32 3 72844 151.55 125.61 1 NaN NaN 0 17288000 17288000 0 37508 1721 14108 14492 58913;58914;58915 58913 VIDSSDVVVQVLDAR 15 0 1 Unmodified _VIDSSDVVVQVLDAR_ 0 0 0 Q5T0F3;Q13823;B4DPI9 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.9435 2 807.938502 1613.86245 67987.99 0.74789 0.00060425 0.30346 0.00024518 1.0514 0.00084943 807.938888554023 812.942733484346 124.61 0.72433 124.61 124.31 125.04 0 197 31 9 0 0 0 6.1144E-07 2 74638 100.19 77.654 1 1.3274 1.1012 0 20630000 8779300 11851000 37509 1721 14108 14492 58916;58917 58917 VIDSSDVVVQVLDAR 15 0 1 Unmodified _VIDSSDVVVQVLDAR_ 0 0 0 Q5T0F3;Q13823;B4DPI9 Q5T0F3 Q5T0F3 GNL2 Nucleolar GTP-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 812.9436 2 807.938502 1613.86245 68107.09 0.74332 0.00060056 0.095893 7.7475E-05 0.83921 0.00067803 807.938541560086 812.942731597328 124.43 0.67138 124.43 124.2 124.87 0 194 30 9 0 0 0 2.301E-15 2 73641 132.59 108.84 1 1.2802 1.0958 0 20694000 8095500 12599000 37510 1721 14108 14492 58918;58919 58919 VIEASDVVLEVLDAR 15 0 1 Unmodified _VIEASDVVLEVLDAR_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.4494 2 814.448702 1626.88285 66498.45 0.6032 0.00049128 0.59867 0.00048759 1.2019 0.00097887 814.44864798425 819.453884724622 128.96 0.38086 128.96 128.71 129.09 0 136 24 8 0 0 0 1.6451E-47 1 84041 182.08 182.08 1 0.85904 0.97978 0 120090000 66150000 53940000 37511 125 14109 14493 58920 58920 VIEASDVVLEVLDAR 15 0 1 Unmodified _VIEASDVVLEVLDAR_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 819.4523 2 814.448702 1626.88285 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.78 1 128.78 128.28 129.28 0 0 0 0 2.3904E-34 1 83991 150.68 115.46 1 37512 125 14109 14493 58921 58921 VIEASDVVLEVLDAR 15 0 1 Unmodified _VIEASDVVLEVLDAR_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.9539 2 814.448702 1626.88285 67550.41 0.33246 0.00027077 0.80559 0.00065611 1.1381 0.00092688 814.951412974827 819.453941487378 128.55 0.29871 128.55 128.41 128.71 1.5259E-05 161 26 9 0 0 0 3.2802E-84 2 85886 216.03 216.03 1 0.79503 0.91212 0 182710000 101680000 81035000 37513 125 14109 14493 58922;58923 58922 VIEEQLEPAVEK 12 1 0 Unmodified _VIEEQLEPAVEK_ 0 0 0 E5KNY5;P42704 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.3727 2 692.371932 1382.72931 NaN NaN NaN 0.44492 0.00030805 NaN NaN NaN NaN 61.761 0.57498 61.761 61.45 62.025 0 0 0 0 0.00099582 1 36181 82.954 46.62 1 NaN NaN 0 8684600 8684600 0 37514 1207 14110 14494 58924 58924 VIEEQLEPAVEK 12 1 0 Unmodified _VIEEQLEPAVEK_ 0 0 0 E5KNY5;P42704 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.3721 2 692.371932 1382.72931 76290.98 0.41 0.00028387 0.036221 2.5079E-05 0.44622 0.00030895 692.371588436516 696.379585746792 73.012 0.56931 73.012 72.77 73.339 7.6294E-06 168 43 5 0 0 0 0.0085902 2 37745 60.398 42.578 1 1.3468 1.0509 0 3641200 1797200 1844000 37515 1207 14110 14494 58925;58926 58925 VIEFAAK 7 1 0 Unmodified _VIEFAAK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 393.2357 2 389.228897 776.44324 97237.66 0.36289 0.00014125 0.20709 8.0606E-05 0.56998 0.00022185 389.228838469827 393.235874394128 43.72 0.81622 43.72 43.404 44.22 0 321 72 10 0 0 0 0.034211 2 23307 62.714 28.976 1 0.92373 1.0866 0 317210000 170800000 146410000 37516 1995 14111 14495 58927;58928 58927 VIEFAAK 7 1 0 Unmodified _VIEFAAK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 393.2361 2 389.228897 776.44324 96560.58 0.50957 0.00019834 0.27445 0.00010683 0.78402 0.00030516 389.228856860894 393.235886263118 42.649 0.96358 42.649 42.314 43.278 0 328 78 8 0 0 0 0.027742 2 22866 73.039 39.3 1 0.8215 0.94989 0 200530000 108340000 92195000 37517 1995 14111 14495 58929;58930 58929 VIEFAAK 7 1 0 Unmodified _VIEFAAK_ 0 0 0 Q9BPX3;Q6NUR1;D6RA93 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 393.2357 2 389.228897 776.44324 97638.85 0.11115 4.3263E-05 0.11317 4.4048E-05 0.22432 8.7311E-05 389.228842702057 393.235909720802 49.049 1.454 49.049 48.746 50.2 0 502 121 6 0 0 0 0.049196 1 24264 55.441 21.703 1 1.6589 1.3072 0 10924000 4221500 6702100 37518 1995 14111 14495 58931 58931 VIELFSVCTNEDPK 14 1 0 Unmodified _VIELFSVCTNEDPK_ 0 0 0 V9HWH0;Q96KB5 V9HWH0 V9HWH0 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 825.9066 2 825.905813 1649.79707 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.49 1 100.49 99.994 100.99 0 0 0 0 0.0055047 1 61613 55.314 43.101 1 37519 1975 14112 14496 58932 58932 VIEPGCVR 8 0 1 Unmodified _VIEPGCVR_ 0 0 0 A0A024R6S1;O60884 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.2518 2 465.247295 928.480036 87867.93 0.20901 9.7242E-05 0.10044 4.6728E-05 0.30945 0.00014397 465.247452832434 470.251154046528 30.992 0.51445 30.992 30.694 31.208 0 111 44 5 0 0 0 0.025194 1 15252 62.659 35.862 1 1.5431 1.6292 0 23452000 8158200 15293000 37520 208 14113 14497 58933 58933 VIESTQDLGNDLAGVMALQR 20 0 1 Oxidation (M) _VIESTQDLGNDLAGVM(ox)ALQR_ VIESTQDLGNDLAGVM(1)ALQR VIESTQDLGNDLAGVM(72.5)ALQR 0 1 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1079.0502 2 1073.54407 2145.07358 60460.48 -0.11768 -0.00012633 0.29553 0.00031727 0.17786 0.00019094 1073.54407339762 1079.05056986755 102.65 0.47281 102.65 102.37 102.84 0 115 40 5 0 0 0 8.2115E-07 1 63286 72.496 72.496 1 1.6375 1.701 0 13580000 6725900 6853600 37521 415 14114 14498 58934 58934 306 VIFFLPWQK 9 1 0 Unmodified _VIFFLPWQK_ 0 0 0 B7Z601;Q53T76;A8K1Z2;A0A140VJK2;P43304;A0A0S2Z3S0;Q8WUQ0;F5GYK7 B7Z601 B7Z601 GPD2 Glycerol-3-phosphate dehydrogenase;Glycerol-3-phosphate dehydrogenase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3488 2 589.342052 1176.66955 NaN NaN NaN -0.078412 -4.6212E-05 NaN NaN NaN NaN 124 0.36057 124 123.77 124.13 -7.6294E-06 0 0 0 0.002884 1 82342 79.597 52.072 1 NaN NaN 0 1569300 0 1569300 37522 603 14115 14499 58935 58935 VIFHPEFLSSTSPLLPVDYEEFVR 24 0 1 Unmodified _VIFHPEFLSSTSPLLPVDYEEFVR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 944.822 3 941.153088 2820.43743 62537.62 0.84199 0.00079244 -0.013044 -1.2277E-05 0.82895 0.00078017 941.4874728429 944.823534104135 133.11 0.27634 133.11 132.95 133.22 -1.5259E-05 66 9 11 0 0 0 0.010616 1 87018 21.291 21.291 1 0.70548 0.80774 0 130700000 91616000 39087000 37523 1479 14116 14500 58936 58936 VIFHPEFLSSTSPLLPVDYEEFVR 24 0 1 Unmodified _VIFHPEFLSSTSPLLPVDYEEFVR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 944.8257 3 941.153088 2820.43743 62190.78 0.78778 0.00074142 -0.069701 -6.5599E-05 0.71808 0.00067583 941.487322221195 944.823583214997 133.06 0.2919 133.06 132.9 133.19 0 94 12 13 0 0 0 1.9841E-36 2 89219 134.87 134.87 1 0.39396 0.45332 0 209980000 147590000 62389000 37524 1479 14116 14500 58937;58938 58937 VIFHPEFLSSTSPLLPVDYEEFVR 24 0 1 Unmodified _VIFHPEFLSSTSPLLPVDYEEFVR_ 0 0 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6;B7Z255 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 941.1397 3 941.153088 2820.43743 61992.21 0.73894 0.00069546 0.099256 9.3416E-05 0.8382 0.00078888 941.48757227878 945.158086017013 134.72 0.44014 134.72 134.56 135 0 29 9 10 0 0 0 4.3853E-13 1 82349 76.807 76.807 1 0.45189 0.3893 0 62920000 43450000 19470000 37525 1479 14116 14500 58939 58939 VIFLEDDDVAAVVDGR 16 0 1 Unmodified _VIFLEDDDVAAVVDGR_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.9473 2 866.941241 1731.86793 NaN NaN NaN 0.043484 3.7698E-05 NaN NaN NaN NaN 116.58 0.58417 116.58 116.31 116.89 7.6294E-06 0 0 0 1.5248E-35 2 74456 150.68 125.47 1 NaN NaN 0 12740000 0 12740000 37526 1688 14117 14501 58940;58941 58941 VIFLEDDDVAAVVDGR 16 0 1 Unmodified _VIFLEDDDVAAVVDGR_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 872.4471 2 866.941241 1731.86793 NaN NaN NaN 0.11535 0.0001 NaN NaN NaN NaN 116.18 0.57153 116.18 115.93 116.5 7.6294E-06 0 0 0 3.2226E-09 1 75828 103.75 86.726 1 NaN NaN 0 14398000 0 14398000 37527 1688 14117 14501 58942 58942 VIFTSPIK 8 1 0 Unmodified _VIFTSPIK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 456.7866 2 452.778754 903.542954 90108.35 0.21034 9.5237E-05 -0.11398 -5.1606E-05 0.096362 4.3631E-05 452.77867947411 456.785672923827 76.492 0.84809 76.492 76.178 77.026 0 253 71 4 0 0 0 0.019774 1 44993 58.917 14.225 1 0.97276 0.95268 0 22107000 14589000 7518300 37528 1563 14118 14502 58943 58943 VIFTSPIK 8 1 0 Unmodified _VIFTSPIK_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 456.7857 2 452.778754 903.542954 91150.8 0.064341 2.9132E-05 0.032226 1.4591E-05 0.096567 4.3724E-05 452.778777709865 456.785713932882 75.272 0.86263 75.272 74.908 75.77 7.6294E-06 251 76 5 0 0 0 0.017078 1 45292 60.682 17.558 1 0.97942 1.0241 0 19328000 10066000 9261900 37529 1563 14118 14502 58944 58944 VIGLQIFNIDTDR 13 0 1 Unmodified _VIGLQIFNIDTDR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.4124 2 752.411923 1502.80929 71409.04 0.77491 0.00058305 0.17329 0.00013039 0.94821 0.00071344 752.412064917079 757.416275861108 120.54 0.53792 120.54 120.28 120.82 0 189 38 8 0 0 0 1.5955E-13 2 77693 155.15 124.08 1 0.59277 0.61816 0 21355000 13198000 8156900 37530 1233 14119 14503 58945;58946 58946 VIGLQIFNIDTDR 13 0 1 Unmodified _VIGLQIFNIDTDR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.4127 2 752.411923 1502.80929 71224.61 0.99474 0.00074845 0.17532 0.00013191 1.1701 0.00088036 752.913414794244 757.416457538983 120.03 0.53503 120.03 119.79 120.32 0 194 38 7 0 0 0 3.9797E-14 2 79203 162.38 131.31 1 0.59357 0.64354 0 27743000 17636000 10107000 37531 1233 14119 14503 58947;58948 58948 VIGLQIFNIDTDR 13 0 1 Unmodified _VIGLQIFNIDTDR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.4145 2 752.411923 1502.80929 69880.35 1.2725 0.00095747 0.50877 0.00038281 1.7813 0.0013403 752.412188151508 757.416429581905 132.73 0.50546 132.73 132.49 133 0 134 21 8 0 0 0 4.1792E-09 2 80794 143.89 112.82 1 1.5661 1.2849 0 12300000 4795900 7503900 37532 1233 14119 14503 58949;58950 58950 VIGLQIFNIDTDR 13 0 1 Unmodified _VIGLQIFNIDTDR_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.4188 2 752.411923 1502.80929 70136.53 1.1661 0.00087737 0.31793 0.00023921 1.484 0.0011166 752.412083560966 757.416106704671 132.47 0.63536 132.47 132.23 132.86 0 130 26 8 0 0 0 0.00013105 1 79595 79.693 57.607 1 1.6978 1.3881 0 13146000 5148000 7998300 37533 1233 14119 14503 58951 58951 VIGLSSDLQQVGGASAR 17 0 1 Unmodified _VIGLSSDLQQVGGASAR_ 0 0 0 B4DMT5;B3KSH1;O00303;B4DEW9;H0YDT6 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.4479 2 829.447025 1656.8795 69040.51 1.277 0.0010592 0.31639 0.00026243 1.5934 0.0013217 829.447850426102 834.450756717949 84.153 0.55354 84.153 83.883 84.436 0 187 42 6 0 0 0 4.2589E-13 2 50401 122.66 122.66 1 1.1794 1.2065 0 33819000 14859000 18960000 37534 939 14120 14504 58952;58953 58953 VIGLSSDLQQVGGASAR 17 0 1 Unmodified _VIGLSSDLQQVGGASAR_ 0 0 0 B4DMT5;B3KSH1;O00303;B4DEW9;H0YDT6 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.9537 2 829.447025 1656.8795 69124.8 0.75107 0.00062297 0.9115 0.00075604 1.6626 0.001379 829.448491182628 834.451162518163 83.208 0.5651 83.208 82.951 83.516 7.6294E-06 185 41 6 0 0 0 0.00021292 1 50822 56.122 50.277 1 1.3251 1.4358 0 27564000 13867000 13696000 37535 939 14120 14504 58954 58954 VIGLSSDLQQVGGASAR 17 0 1 Unmodified _VIGLSSDLQQVGGASAR_ 0 0 0 B4DMT5;B3KSH1;O00303;B4DEW9;H0YDT6 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.451 2 829.447025 1656.8795 68121.49 0.91353 0.00075773 -0.13978 -0.00011594 0.77375 0.00064179 829.447049849273 834.450957006991 96.472 0.53613 96.472 96.261 96.798 7.6294E-06 135 32 6 0 0 0 7.8643E-05 2 54172 77.912 71.671 1 1.105 0.94423 0 5792700 2523700 3269000 37536 939 14120 14504 58955;58956 58956 VIGLSSDLQQVGGASAR 17 0 1 Unmodified _VIGLSSDLQQVGGASAR_ 0 0 0 B4DMT5;B3KSH1;O00303;B4DEW9;H0YDT6 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 829.4484 2 829.447025 1656.8795 68232.13 0.53543 0.00044411 0.022154 1.8376E-05 0.55759 0.00046249 829.447282205025 834.450916461514 96.414 0.49984 96.414 96.159 96.658 0 140 29 7 0 0 0 1.7058E-05 2 53240 84.297 84.297 1 1.0662 0.88465 0 5758800 3086900 2671900 37537 939 14120 14504 58957;58958 58957 VIGTLLGTVDK 11 1 0 Unmodified _VIGTLLGTVDK_ 0 0 0 B4DMT5;B3KSH1;O00303 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.3391 2 558.337164 1114.65977 82033.77 0.60456 0.00033755 0.70901 0.00039587 1.3136 0.00073342 558.337772618951 562.344603325689 85.931 0.8253 85.931 85.497 86.323 0 209 69 5 0 0 0 0.030229 2 51612 38.783 16.628 1 1.5224 1.4927 0 20674000 7982300 12691000 37538 939 14121 14505 58959;58960 58960 VIGTLLGTVDK 11 1 0 Unmodified _VIGTLLGTVDK_ 0 0 0 B4DMT5;B3KSH1;O00303 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.3448 2 558.337164 1114.65977 81498.94 0.61625 0.00034408 0.682 0.00038079 1.2983 0.00072486 558.337750438347 562.344626846955 84.706 0.71622 84.706 84.4 85.116 0 206 60 5 0 0 0 0.00022695 2 52068 91.636 50.607 1 1.7145 1.7561 0 31822000 10680000 21142000 37539 939 14121 14505 58961;58962 58961 VIGVLEPLDPEDYTK 15 1 0 Unmodified _VIGVLEPLDPEDYTK_ 0 0 0 C9IZ01;E5KND7;E5KND5;Q96RP9 C9IZ01 C9IZ01 GFM1 Elongation factor G, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 848.4493 2 844.443086 1686.87162 NaN NaN NaN 0.40857 0.00034502 NaN NaN NaN NaN 113.93 0.48842 113.93 113.67 114.16 0 0 0 0 0.0023038 1 72206 63.408 43.646 1 NaN NaN 0 4686300 0 4686300 37540 1126 14122 14506 58963 58963 VIGVLEPLDPEDYTK 15 1 0 Unmodified _VIGVLEPLDPEDYTK_ 0 0 0 C9IZ01;E5KND7;E5KND5;Q96RP9 C9IZ01 C9IZ01 GFM1 Elongation factor G, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 848.4531 2 844.443086 1686.87162 NaN NaN NaN 0.75232 0.00063529 NaN NaN NaN NaN 113.37 0.4427 113.37 113.15 113.59 7.6294E-06 0 0 0 0.00027358 1 73627 76.143 55.936 1 NaN NaN 0 3863200 0 3863200 37541 1126 14122 14506 58964 58964 VIHDNFGIVEGLMTTVHAITATQK 24 1 0 Unmodified _VIHDNFGIVEGLMTTVHAITATQK_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 868.7968 3 865.791496 2594.35266 65398.41 0.97629 0.00084527 0.14086 0.00012195 1.1171 0.00096722 866.125477055712 868.797613102857 132.58 0.15497 132.58 132.47 132.62 0 24 7 7 0 0 0 0.0006375 1 88856 30.597 30.597 1 1.8875 1.9365 0 9455000 3194800 6260200 37542 1442 14123 14507 58965 58965 VIHELANER 9 0 1 Unmodified _VIHELANER_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.7936 2 540.793455 1079.57236 80908.97 0.85664 0.00046326 0.45005 0.00024338 1.3067 0.00070665 540.793109518765 545.796664181561 22.325 0.56036 22.325 22.141 22.701 0 143 35 8 0 0 0 0.0047154 1 8478 78.516 75.162 1 0.59869 0.63445 0 41591000 25291000 16299000 37543 1679 14124 14508 58966 58966 VIHELANER 9 0 1 Unmodified _VIHELANER_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 364.2016 3 360.864729 1079.57236 100249.4 0.27641 9.9748E-05 -0.20261 -7.3116E-05 0.0738 2.6632E-05 360.864677929179 364.200664458939 22.334 0.64502 22.334 22.141 22.786 0 184 40 8 0 0 0 0.00088187 2 8512 70.1 57.887 1 0.53087 0.58096 0 52748000 34938000 17810000 37544 1679 14124 14508 58967;58968 58968 VIHELANER 9 0 1 Unmodified _VIHELANER_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.7937 2 540.793455 1079.57236 81616.57 0.45193 0.0002444 0.3616 0.00019555 0.81353 0.00043995 540.793311572474 545.797758583596 21.63 0.62236 21.63 21.322 21.945 0 93 23 7 0 0 0 0.00087795 2 7736 103.55 91.019 1 0.55202 0.6369 0 55141000 35450000 19691000 37545 1679 14124 14508 58969;58970 58969 VIHELANER 9 0 1 Unmodified _VIHELANER_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 364.2004 3 360.864729 1079.57236 98580.03 0.10991 3.9664E-05 -0.3261 -0.00011768 -0.21619 -7.8014E-05 360.864561638768 364.200603333914 21.629 0.61707 21.629 21.444 22.061 0 120 28 7 0 0 0 7.9357E-05 2 7784 90.15 75.477 1 0.51388 0.5911 0 75450000 49328000 26122000 37546 1679 14124 14508 58971;58972 58972 VIHELANER 9 0 1 Unmodified _VIHELANER_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 545.7975 2 540.793455 1079.57236 81996.97 0.53356 0.00028854 -0.88539 -0.00047882 -0.35184 -0.00019027 540.793351547356 545.797564808302 23.93 0.59103 23.93 23.762 24.353 -1.9073E-06 126 33 7 0 0 0 0.021043 1 8219 49.715 46.144 1 1.1231 0.96361 0 6253800 2758800 3495000 37547 1679 14124 14508 58973 58973 VIHELANER 9 0 1 Unmodified _VIHELANER_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 364.2008 3 360.864729 1079.57236 97987.27 -0.003986 -1.4384E-06 -0.23509 -8.4834E-05 -0.23907 -8.6273E-05 360.864608565483 364.200699249988 23.934 0.55353 23.934 23.762 24.315 0 144 31 7 0 0 0 0.047646 1 8225 22.775 20.042 1 1.0421 0.8814 0 9466000 4510000 4956000 37548 1679 14124 14508 58974 58974 VIHELANER 9 0 1 Unmodified _VIHELANER_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 364.2009 3 360.864729 1079.57236 100154.1 -0.11773 -4.2486E-05 -0.093539 -3.3755E-05 -0.21127 -7.6241E-05 360.864629939246 364.200698566454 23.621 0.45704 23.621 23.416 23.873 0 132 25 8 0 0 0 0.017335 1 7547 36.318 28.672 1 1.0083 0.83952 0 7102600 3514600 3588000 37549 1679 14124 14508 58975 58975 VIHELANER 9 0 1 Unmodified _VIHELANER_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.7979 2 540.793455 1079.57236 82167.63 0.40549 0.00021929 0.26371 0.00014261 0.6692 0.0003619 540.793380130438 545.797609261367 23.606 0.44131 23.606 23.416 23.857 0 120 24 9 0 0 0 0.034146 1 7561 44.377 44.377 1 0.97855 0.81557 0 4991200 2570300 2420800 37550 1679 14124 14508 58976 58976 VIHEQVNHR 9 0 1 Unmodified _VIHEQVNHR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.3049 2 566.304521 1130.59449 78769.99 -0.15688 -8.8841E-05 -0.037993 -2.1516E-05 -0.19487 -0.00011036 566.304672359778 571.308566443977 14.736 0.38768 14.736 14.625 15.013 0 64 11 9 0 0 0 3.853E-34 4 2597 190.73 167.99 1 0.7258 0.82921 0 124630000 71913000 52715000 37551 1471 14125 14509 58977;58978;58979;58980 58979 VIHEQVNHR 9 0 1 Unmodified _VIHEQVNHR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 377.8721 3 377.872106 1130.59449 95988.22 -0.701 -0.00026489 -1.2039 -0.0004549 -1.9049 -0.00071979 377.871759308198 381.208091896074 14.736 0.55688 14.736 14.625 15.182 -9.5367E-07 77 15 9 0 0 0 3.4853E-12 2 2596 138.1 125.48 1 0.76797 0.89968 0 212610000 118560000 94052000 37552 1471 14125 14509 58981;58982 58981 VIHLSLAPK 9 1 0 Unmodified _VIHLSLAPK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 329.2143 3 326.542927 976.606951 104326.9 0.047203 1.5414E-05 -0.14013 -4.5759E-05 -0.09293 -3.0346E-05 326.542805838735 329.214197334263 56.236 0.64682 56.236 55.987 56.634 3.8147E-06 232 48 7 0 0 0 0.022525 2 32182 34.206 34.206 1 1.1609 1.308 0 59484000 28867000 30617000 37553 1741 14126 14510 58983;58984 58983 VIHLSLAPK 9 1 0 Unmodified _VIHLSLAPK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 489.3106 2 489.310752 976.606951 87777.66 0.20174 9.8712E-05 0.16311 7.9814E-05 0.36485 0.00017853 489.310645581253 493.317892796403 56.241 0.56637 56.241 55.996 56.563 3.8147E-06 188 42 6 0 0 0 0.0051665 2 32268 80.684 80.684 1 1.6047 1.6325 0 30393000 12977000 17416000 37554 1741 14126 14510 58985;58986 58986 VIHLSLAPK 9 1 0 Unmodified _VIHLSLAPK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 493.318 2 489.310752 976.606951 86849.77 0.15749 7.706E-05 0.17253 8.4421E-05 0.33002 0.00016148 489.310657318454 493.317860443844 66.614 0.80206 66.614 66.268 67.07 0 210 49 6 0 0 0 0.021547 1 33712 49.097 49.097 1 1.6608 1.3253 0 4108000 1872200 2235800 37555 1741 14126 14510 58987 58987 VIIIGSGVSGLAAAR 15 0 1 Unmodified _VIIIGSGVSGLAAAR_ 0 0 0 A8K2R3;O60341 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.3469 2 692.419551 1382.82455 75916.34 0.83018 0.00057483 -0.28245 -0.00019558 0.54773 0.00037926 692.419348811108 697.423211919379 98.864 0.58235 98.864 98.589 99.171 0 178 46 5 0 0 0 0.012886 1 60474 50.149 50.149 1 0.83511 0.83672 0 16261000 9195100 7065600 37556 711 14127 14511 58988 58988 VIIIGSGVSGLAAAR 15 0 1 Unmodified _VIIIGSGVSGLAAAR_ 0 0 0 A8K2R3;O60341 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.363 2 692.419551 1382.82455 74536.06 0.79111 0.00054778 -0.16853 -0.00011669 0.62258 0.00043108 692.419339830731 697.423558264419 98.063 0.54598 98.063 97.824 98.37 0 185 48 5 0 0 0 0.019361 1 61382 46.706 46.706 1 0.82511 0.88451 0 25243000 14456000 10787000 37557 711 14127 14511 58989 58989 VIIIGSGVSGLAAAR 15 0 1 Unmodified _VIIIGSGVSGLAAAR_ 0 0 0 A8K2R3;O60341 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.4248 2 692.419551 1382.82455 75523.66 0.76066 0.00052669 -0.027719 -1.9193E-05 0.73294 0.0005075 692.921062645799 697.423716950121 111.68 0.43903 111.68 111.43 111.87 0 88 24 6 0 0 0 0.00022163 1 64726 66.262 66.262 1 1.3518 1.133 0 4068600 1697400 2371100 37558 711 14127 14511 58990 58990 VIIIGSGVSGLAAAR 15 0 1 Unmodified _VIIIGSGVSGLAAAR_ 0 0 0 A8K2R3;O60341 A8K2R3 A8K2R3 KDM1A Lysine-specific histone demethylase 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 697.424 2 692.419551 1382.82455 75130.63 0.56258 0.00038954 -0.15655 -0.0001084 0.40604 0.00028115 692.41936196111 697.423729619481 111.49 0.37232 111.49 111.28 111.65 0 77 20 6 0 0 0 0.00019634 2 63661 76.655 76.655 1 1.3784 1.1829 0 4456900 2360900 2096000 37559 711 14127 14511 58991;58992 58991 VIILGDSGVGK 11 1 0 Unmodified _VIILGDSGVGK_ 0 0 0 A0A158RFU6;P51149;C9J592;C9J8S3;B4DPH9;C9IZZ0;C9J4V0;C9J4S4;C9J7D1 A0A158RFU6 A0A158RFU6 RAB7A Ras-related protein Rab-7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.3166 2 529.316232 1056.61791 84698.95 0.26326 0.00013935 0.19357 0.00010246 0.45683 0.00024181 529.316208380477 533.323444386048 80.751 0.47399 80.751 80.513 80.987 -7.6294E-06 112 31 5 0 0 0 0.019604 2 43634 44.203 13.949 1 1.0324 0.81602 0 3049300 1786800 1262500 37560 628 14128 14512 58993;58994 58993 VIILSLDR 8 0 1 Unmodified _VIILSLDR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.3023 2 464.794935 927.575317 NaN NaN NaN 2.5865 0.0012022 NaN NaN NaN NaN 88.947 0.25882 88.947 88.79 89.049 0 0 0 0 0.038262 1 53627 54.549 26.037 1 NaN NaN 0 3248300 0 3248300 37561 1054 14129 14513 58995 58995 VIILSLDR 8 0 1 Unmodified _VIILSLDR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.8 2 464.794935 927.575317 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.311 1 89.311 88.811 89.811 0 0 0 0 0.0080733 1 53914 79.469 37.966 1 37562 1054 14129 14513 58996 58996 VIILSLDR 8 0 1 Unmodified _VIILSLDR_ 0 0 0 D3DQV9;Q59G42;B4DZF2;P78344;H0Y3P2;Q2TU89;E9PKF8 D3DQV9 D3DQV9 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.8 2 464.794935 927.575317 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.102 1 88.102 87.602 88.602 0 0 0 0 0.0052682 1 54349 85.212 36.708 1 37563 1054 14129 14513 58997 58997 VIISAPSADAPMFVMGVNHEK 21 1 0 2 Oxidation (M) _VIISAPSADAPM(ox)FVM(ox)GVNHEK_ VIISAPSADAPM(1)FVM(1)GVNHEK VIISAPSADAPM(58.49)FVM(58.49)GVNHEK 0 2 0 V9HVZ4;P04406;Q0QET7;E7EUT5;A4UCT1;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.0453 3 749.037901 2244.09187 68972.47 0.58877 0.00044101 -0.17352 -0.00012998 0.41525 0.00031104 749.03774255444 752.043637333609 85.932 0.81244 85.932 85.556 86.369 0 445 68 9 0 0 0 2.3349E-07 2 51493 58.49 58.49 1 4.0075 4.5369 0 100600000 21316000 79281000 37564 1442 14130 14514 58998;58999 58998 1145;1146 VIISAPSADAPMFVMGVNHEK 21 1 0 2 Oxidation (M) _VIISAPSADAPM(ox)FVM(ox)GVNHEK_ VIISAPSADAPM(1)FVM(1)GVNHEK VIISAPSADAPM(42.31)FVM(42.31)GVNHEK 0 2 0 V9HVZ4;P04406;Q0QET7;E7EUT5;A4UCT1;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 752.0431 3 749.037901 2244.09187 68849.12 0.90272 0.00067617 -0.48838 -0.00036581 0.41434 0.00031036 749.037513800426 752.043384539023 84.916 0.82671 84.916 84.62 85.447 -7.6294E-06 452 70 10 0 0 0 2.7867E-05 1 52071 42.309 42.309 1 3.9336 4.4079 0 112030000 23545000 88490000 37565 1442 14130 14514 59000 59000 1145;1146 VIITNFPAAK 10 1 0 Unmodified _VIITNFPAAK_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 541.3286 2 537.321317 1072.62808 84320.54 0.74056 0.00039792 -0.0045951 -2.4691E-06 0.73596 0.00039545 537.321345491374 541.328200510097 75.867 0.48657 75.867 75.655 76.142 -7.6294E-06 145 40 6 0 0 0 0.00072248 1 44600 82.279 73.366 1 1.2723 1.2574 0 25673000 11050000 14623000 37566 1575 14131 14515 59001 59001 VIITNFPAAK 10 1 0 Unmodified _VIITNFPAAK_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.329 2 537.321317 1072.62808 84337.43 0.60342 0.00032423 -0.16114 -8.6582E-05 0.44228 0.00023765 537.321177035727 541.328224065531 74.68 0.36897 74.68 74.483 74.852 0 154 32 6 0 0 0 0.00029185 1 44902 91.064 84.858 1 1.5704 1.5842 0 26925000 10818000 16107000 37567 1575 14131 14515 59002 59002 VIITNFPAAK 10 1 0 Unmodified _VIITNFPAAK_ 0 0 0 Q53HS0;P47897;A8K3A8;Q96AW5;B4DNN3;A0A1B0GVU9;H7C0R3;Q9H3A5;Q9BUZ3;B4DDN1 Q53HS0 Q53HS0 QARS Glutamine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 541.3278 2 537.321317 1072.62808 84566.16 0.53832 0.00028925 0.1373 7.3775E-05 0.67562 0.00036303 537.321235672469 541.328196384798 86.373 0.37498 86.373 86.181 86.556 7.6294E-06 91 21 6 0 0 0 0.030504 1 46524 42.599 39.343 1 0.7044 0.58428 0 1790800 1038100 752710 37568 1575 14131 14515 59003 59003 VILESEVIAEAVGVK 15 1 0 Unmodified _VILESEVIAEAVGVK_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.4514 2 778.450714 1554.88687 69391.51 0.76275 0.00059376 0.027469 2.1383E-05 0.79022 0.00061515 778.952496650936 782.457320445068 115.28 0.58913 115.28 114.98 115.57 7.6294E-06 163 38 6 0 0 0 2.1251E-07 2 75134 108.35 108.35 1 0.77384 0.78959 0 17168000 10075000 7092700 37569 655 14132 14516 59004;59005 59005 VILGAHNEK 9 1 0 Unmodified _VILGAHNEK_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 327.5221 3 327.522303 979.545079 NaN NaN NaN 0.087763 2.8744E-05 NaN NaN NaN NaN 19.757 0.20807 19.757 19.657 19.865 1.9073E-06 0 0 0 0.02962 1 6107 29.437 11.291 1 NaN NaN 0 21309000 21309000 0 + 37570 1157 14133 14517 59006 59006 VINEEYK 7 1 0 Unmodified _VINEEYK_ 0 0 0 Q09028;E9PNS2;E9PIC4;E9PNS6;C9JAJ9;Q6FHQ0;Q16576;E9PC52;A8K6A2 Q09028;Q6FHQ0 Q6FHQ0 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.7388 2 447.732 893.449448 91322.41 -0.30517 -0.00013664 0.17145 7.6764E-05 -0.13372 -5.9871E-05 447.731999112039 451.739111413983 22.036 0.45579 22.036 21.912 22.368 0 111 26 7 0 0 0 0.011486 2 8202 108.24 67.596 1 0.87582 0.99272 0 97197000 49815000 47383000 37571 1771;1695 14134 14518 59007;59008 59008 VINEPTAAALAYGLDK 16 1 0 Unmodified _VINEPTAAALAYGLDK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.451 2 823.44342 1644.87229 67943.91 0.8102 0.00066715 0.079227 6.5239E-05 0.88943 0.00073239 823.945146722536 827.45060143112 99.984 0.80533 99.984 99.57 100.38 -7.6294E-06 482 70 10 0 0 0 8.3651E-13 3 61074 123.64 123.64 1 2.1106 2.3761 0 121390000 36144000 85243000 37572 1092 14135 14519 59009;59010;59011 59010 VINEPTAAALAYGLDK 16 1 0 Unmodified _VINEPTAAALAYGLDK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.4515 2 823.44342 1644.87229 68022.39 1.1116 0.00091538 -0.19779 -0.00016287 0.91386 0.00075251 823.944732455223 827.45041999353 112.82 0.61578 112.82 112.56 113.17 0 186 28 10 0 0 0 2.8932E-06 2 65528 90.926 90.926 1 1.2891 1.0138 0 17276000 7603700 9672200 37573 1092 14135 14519 59012;59013 59013 VINEPTAAALAYGLDK 16 1 0 Unmodified _VINEPTAAALAYGLDK_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;Q2F839 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.9532 2 823.44342 1644.87229 67639.44 0.82288 0.00067759 0.085408 7.0329E-05 0.90829 0.00074792 823.444069675362 827.450563633283 112.67 0.64 112.67 112.44 113.08 -7.6294E-06 183 31 9 0 0 0 9.8101E-05 2 64506 79.633 79.633 1 1.382 1.1101 0 15553000 6506100 9047000 37574 1092 14135 14519 59014;59015 59015 VINIDGQK 8 1 0 Unmodified _VINIDGQK_ 0 0 0 Q03164;B4DIJ7 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180;Histone-lysine N-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.7545 2 443.753267 885.491981 93406.18 0.95437 0.0004235 -0.16897 -7.4979E-05 0.7854 0.00034852 443.753115047714 447.760239327432 29.824 0.32721 29.824 29.7 30.027 0 98 23 8 0 0 0 0.029933 1 14501 52.268 21.265 1 0.7674 0.77389 0 28146000 14569000 13577000 37575 1680 14136 14520 59016 59016 VINLNDNTFTEK 12 1 0 Unmodified _VINLNDNTFTEK_ 0 0 0 B4DY16;A0A024R1U0;P46060;B4E0U0;H0Y4Q3 B4DY16 B4DY16 RANGAP1 Ran GTPase-activating protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.3604 2 704.359356 1406.70416 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.124 1 71.124 70.624 71.624 0 0 0 0 0.025576 1 42582 48.284 14.418 1 37576 90 14137 14521 59017 59017 VINTGIK 7 1 0 Unmodified _VINTGIK_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 376.7414 2 372.734346 743.454139 100099.2 0.1937 7.22E-05 0.11151 4.1564E-05 0.30521 0.00011376 372.734340681416 376.741371114294 26.581 0.22267 26.581 26.451 26.674 1.9073E-06 45 11 5 0 0 0 0.026873 1 11954 81.381 11.949 1 1.5925 1.6047 0 27023000 10779000 16244000 37577 1694 14138 14522 59018 59018 VINTPEVLR 9 0 1 Unmodified _VINTPEVLR_ 0 0 0 A8K9B9;A0A024R9N6;Q9H223 A8K9B9 A8K9B9 EHD4 EH domain-containing protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.8088 2 520.808574 1039.60259 86633.64 0.54124 0.00028188 -2.9334 -0.0015277 -2.3922 -0.0012459 520.808481390807 526.311469875132 68.327 0.51063 68.327 68.069 68.58 0 92 39 5 0 0 0 0.039815 1 40555 42.109 8.3124 1 0.77539 0.76792 0 12241000 7713100 4527400 37578 284 14139 14523 59019 59019 VINTPEVLR 9 0 1 Unmodified _VINTPEVLR_ 0 0 0 A8K9B9;A0A024R9N6;Q9H223 A8K9B9 A8K9B9 EHD4 EH domain-containing protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.8127 2 520.808574 1039.60259 NaN NaN NaN -0.26528 -0.00013816 NaN NaN NaN NaN 63.332 0.44261 63.332 63.066 63.508 0 0 0 0 0.019957 2 37165 58.917 0 1 NaN NaN 0 4646600 0 4646600 37579 284 14139 14523 59020;59021 59021 VIPDFVCQGGDITK 14 1 0 Unmodified _VIPDFVCQGGDITK_ 0 0 0 P49792;Q5JC46;Q5JC45 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.9 2 774.889966 1547.76538 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.508 1 88.508 88.008 89.008 0 0 0 0 0.0097064 1 54586 51.841 37.683 1 37580 1588 14140 14524 59022 59022 VIPEDASESEEK 12 1 0 Unmodified _VIPEDASESEEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.8123 2 666.811904 1331.60926 74477.53 0.47538 0.00031699 0.1411 9.4088E-05 0.61648 0.00041107 666.81204006762 670.81913955403 25.729 0.4739 25.729 25.486 25.96 0 145 26 7 0 0 0 0.00059524 1 11193 68.657 47.658 1 0.74265 0.8022 0 42342000 23923000 18419000 37581 878 14141 14525 59023 59023 VIPEDASESEEK 12 1 0 Unmodified _VIPEDASESEEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 666.8117 2 666.811904 1331.60926 74220.88 0.95271 0.00063528 0.36068 0.00024051 1.3134 0.00087579 666.812070631153 670.819404684816 25.431 0.5927 25.431 25.084 25.676 0 105 24 8 0 0 0 0.00015552 3 10986 92.538 61.926 1 0.65188 0.73237 0 74225000 43622000 30603000 37582 878 14141 14525 59024;59025;59026 59025 VIPEDASESEEK 12 1 0 Unmodified _VIPEDASESEEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 670.8192 2 666.811904 1331.60926 75850.76 0.42378 0.00028258 0.013844 9.2315E-06 0.43762 0.00029181 666.81192079171 670.819052991815 29.085 0.64821 29.085 28.77 29.418 0 229 51 6 0 0 0 0.018838 1 11764 40.496 34.771 1 1.9072 1.5224 0 6919300 2534000 4385300 37583 878 14141 14525 59027 59027 VIPEDASESEEK 12 1 0 Unmodified _VIPEDASESEEK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.8192 2 666.811904 1331.60926 75126.13 0.18862 0.00012578 0.27564 0.0001838 0.46426 0.00030957 666.812015002625 670.819291825019 29.323 0.68069 29.323 29.013 29.694 0 194 40 8 0 0 0 0.0021107 1 11363 59.426 50.104 1 1.744 1.4227 0 6005300 2163000 3842200 37584 878 14141 14525 59028 59028 VIPEDGPAAQNPENVK 16 1 0 Unmodified _VIPEDGPAAQNPENVK_ 0 0 0 B4DF00;E9PDF2;E9PCR7;Q02218;B4DZ95;B4E3E9;B4DH65;E9PFG7;B4DK55;A0A0D9SFS3 B4DF00 B4DF00 OGDH 2-oxoglutarate dehydrogenase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.4257 2 839.425758 1676.83696 66938.4 0.54094 0.00045408 0.5873 0.00049299 1.1282 0.00094707 840.43173790584 843.432743432431 45.968 0.4388 45.968 45.659 46.098 3.8147E-06 122 37 5 0 0 0 5.3665E-05 1 25225 83.314 83.314 1 1.4384 1.4697 0 17307000 8686100 8620600 37585 968 14142 14526 59029 59029 VIPLDRDNK 9 1 1 Unmodified _VIPLDRDNK_ 0 0 1 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.539 3 357.204862 1068.59276 100734.2 0.040613 1.4507E-05 0.041552 1.4842E-05 0.082164 2.935E-05 357.204838038033 363.212356981002 25.847 0.52928 25.847 25.453 25.982 0 108 29 6 0 0 0 0.00095222 1 11326 66.27 58.703 1 0.72056 0.8617 0 54631000 32289000 22342000 37586 1770 14143 14527 59030 59030 VIPLDRDNK 9 1 1 Unmodified _VIPLDRDNK_ 0 0 1 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3146 2 535.303655 1068.59276 83375.77 0.47369 0.00025357 -0.2869 -0.00015358 0.18679 9.9991E-05 535.303443278686 544.31465699135 25.852 0.35052 25.852 25.654 26.004 1.9073E-06 56 18 4 0 0 0 0.038182 1 11415 65.88 57.837 1 0.49448 0.58685 0 43231000 27512000 15718000 37587 1770 14143 14527 59031 59031 VIPLDRDNK 9 1 1 Unmodified _VIPLDRDNK_ 0 0 1 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 363.2134 3 357.204862 1068.59276 99877.1 0.63918 0.00022832 -0.31153 -0.00011128 0.32765 0.00011704 357.204701960766 363.212250180534 25.434 0.38743 25.434 25.219 25.607 0 79 15 7 0 0 0 0.00039441 1 11130 93.429 85.779 1 0.66289 0.77696 0 55953000 31375000 24577000 37588 1770 14143 14527 59032 59032 VIPLDRDNK 9 1 1 Unmodified _VIPLDRDNK_ 0 0 1 Q16531;F5GY55;B7Z2A1;F5H2L3;F5GWI0 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 357.2046 3 357.204862 1068.59276 98972.09 -0.31967 -0.00011419 0.049999 1.786E-05 -0.26967 -9.6327E-05 357.204816421956 363.212328081543 28.225 0.54005 28.225 27.926 28.466 1.9073E-06 99 24 8 0 0 0 0.040225 1 10662 26.442 23.688 1 1.1821 0.99279 0 6855600 3212100 3643500 37589 1770 14143 14527 59033 59033 VIQAGMFDQK 10 1 0 Oxidation (M) _VIQAGM(ox)FDQK_ VIQAGM(1)FDQK VIQAGM(68.37)FDQK 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.7892 2 576.789524 1151.56449 79719.4 0.81281 0.00046882 0.37849 0.00021831 1.1913 0.00068713 576.789679009286 580.796501014988 38.889 1.2678 38.889 38.369 39.637 0 193 55 5 0 0 0 0.0012573 1 20003 68.371 52.789 1 0.75801 0.79768 0 30634000 16515000 14119000 37590 695;1595 14144 14528 59034 59034 541 VIQAGMFDQK 10 1 0 Oxidation (M) _VIQAGM(ox)FDQK_ VIQAGM(1)FDQK VIQAGM(76.22)FDQK 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.7971 2 576.789524 1151.56449 NaN NaN NaN -0.33014 -0.00019042 NaN NaN NaN NaN 37.164 0.71757 37.164 36.894 37.612 0 0 0 0 0.0010981 1 18899 76.221 49.259 1 NaN NaN 0 13502000 0 13502000 37591 695;1595 14144 14528 59035 59035 541 VIQAGMFDQK 10 1 0 Oxidation (M) _VIQAGM(ox)FDQK_ VIQAGM(1)FDQK VIQAGM(92.84)FDQK 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B4E0F1;B4DSI8;B3KNW7;P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.7897 2 576.789524 1151.56449 79374.84 0.45505 0.00026247 0.30462 0.0001757 0.75968 0.00043817 576.789668936771 580.796421168737 37.905 0.60823 37.905 37.496 38.104 0 140 35 6 0 0 0 0.00011512 2 19768 92.838 74.852 1 0.82406 0.90591 0 42173000 23443000 18730000 37592 695;1595 14144 14528 59036;59037 59036 541 VIQCFAETGQVQK 13 1 0 Unmodified _VIQCFAETGQVQK_ 0 0 0 A0A087WVQ6;Q00610 A0A087WVQ6 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.3909 2 754.382308 1506.75006 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.15 1 50.15 49.65 50.65 0 0 0 0 0.00020949 1 28314 90.827 63.523 1 37593 419 14145 14529 59038 59038 VIQCYIQYGNEEQR 14 0 1 Unmodified _VIQCYIQYGNEEQR_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.4211 2 900.422693 1798.83083 NaN NaN NaN 0.11266 0.00010144 NaN NaN NaN NaN 65.061 0.33627 65.061 64.813 65.149 0 0 0 0 0.0027897 2 37378 64.439 50.019 1 NaN NaN 0 3875500 3875500 0 37594 1761 14146 14530 59039;59040 59039 VIQCYIQYGNEEQR 14 0 1 Unmodified _VIQCYIQYGNEEQR_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 905.428 2 900.422693 1798.83083 63633.99 0.12573 0.00011321 1.0672 0.00096092 1.1929 0.0010741 901.428337549446 905.427529896359 75.356 0.77358 75.356 75.058 75.832 0 168 56 5 0 0 0 0.032039 2 39182 30.55 30.55 1 1.4022 1.1924 0 3136700 1333900 1802800 37595 1761 14146 14530 59041;59042 59041 VIQCYIQYGNEEQRK 15 1 1 Unmodified _VIQCYIQYGNEEQRK_ 0 0 1 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.6489 3 643.315875 1926.9258 NaN NaN NaN -0.52615 -0.00033848 NaN NaN NaN NaN 58.61 0.70821 58.61 58.256 58.965 -3.8147E-06 0 0 0 0.00037626 1 29755 65.805 49.921 1 NaN NaN 0 2006300 2006300 0 37596 1761 14147 14531 59043 59043 VIQEGLEGLVLK 12 1 0 Unmodified _VIQEGLEGLVLK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.3906 2 649.389928 1296.7653 75995.7 0.89986 0.00058436 -0.21291 -0.00013826 0.68695 0.0004461 649.389804785303 653.396858978638 103.51 0.69062 103.51 103.24 103.93 -7.6294E-06 247 56 6 0 0 0 2.6986E-06 2 63728 111.46 66.374 1 0.59092 0.63565 0 40282000 26163000 14120000 37597 1589 14148 14532 59044;59045 59044 VIQEGLEGLVLK 12 1 0 Unmodified _VIQEGLEGLVLK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3979 2 649.389928 1296.7653 76197.86 1.0631 0.00069038 -0.17492 -0.00011359 0.8882 0.00057679 649.389893160191 653.396973508056 102.71 0.63696 102.71 102.48 103.11 0 238 50 7 0 0 0 3.4075E-05 2 64779 99.653 59.608 1 0.59052 0.66439 0 56615000 34687000 21928000 37598 1589 14148 14532 59046;59047 59046 VIQEGLEGLVLK 12 1 0 Unmodified _VIQEGLEGLVLK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.39 2 649.389928 1296.7653 76874.17 1.1965 0.00077697 -0.15975 -0.00010374 1.0367 0.00067323 649.389743256669 653.396926751539 115.62 0.4589 115.62 115.45 115.91 0 105 21 7 0 0 0 0.00022668 2 67752 84.17 44.125 1 0.64365 0.50826 0 6025400 3601600 2423700 37599 1589 14148 14532 59048;59049 59049 VIQEGLEGLVLK 12 1 0 Unmodified _VIQEGLEGLVLK_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.3975 2 649.389928 1296.7653 76483 0.76736 0.00049832 0.23909 0.00015526 1.0064 0.00065358 649.390010260758 653.396945424538 115.44 0.46499 115.44 115.26 115.73 0 99 21 7 0 0 0 0.00019903 2 66655 78.556 33.475 1 0.61209 0.4993 0 5948400 3969200 1979200 37600 1589 14148 14532 59050;59051 59050 VIQEIVDK 8 1 0 Unmodified _VIQEIVDK_ 0 0 0 P51116;A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 P51116;A0A0F7KYT8 P51116 FXR2;FXR1 Fragile X mental retardation syndrome-related protein 2;Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.2765 2 472.276575 942.538597 88650.13 0.39306 0.00018563 0.2986 0.00014102 0.69166 0.00032665 472.276565136053 476.283720697735 42.034 0.68513 42.034 41.818 42.503 0 232 50 6 0 0 0 0.0011205 2 22258 111.95 59.544 1 1.1294 1.2761 0 106420000 45744000 60678000 37601 1593;531 14149 14533 59052;59053 59052 VIQEIVDK 8 1 0 Unmodified _VIQEIVDK_ 0 0 0 P51116;A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 P51116;A0A0F7KYT8 P51116 FXR2;FXR1 Fragile X mental retardation syndrome-related protein 2;Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.2768 2 472.276575 942.538597 88448.32 0.25568 0.00012075 0.069497 3.2822E-05 0.32518 0.00015358 472.276549470952 476.283600194088 40.731 0.90744 40.731 40.545 41.453 0 190 71 6 0 0 0 0.0048138 2 21894 92.439 47.828 1 1.2883 1.428 0 47260000 21971000 25290000 37602 1593;531 14149 14533 59054;59055 59055 VIQEIVDK 8 1 0 Unmodified _VIQEIVDK_ 0 0 0 P51116;A0A0F7KYT8;A0A0F7L0Q8;B4DXZ6;A0A0F7L1S3;P51114;B4DM78;E7EU85;B4DGH9;E9PFF5;B4DM21 P51116;A0A0F7KYT8 P51116 FXR2;FXR1 Fragile X mental retardation syndrome-related protein 2;Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 472.2768 2 472.276575 942.538597 89540.98 -0.002287 -1.0801E-06 0.24822 0.00011723 0.24593 0.00011615 472.276585560006 476.283728315109 47.799 0.84037 47.799 47.415 48.256 3.8147E-06 208 57 6 0 0 0 0.019677 2 23148 58.981 27.709 1 1.2448 0.9718 0 3270300 1431600 1838700 37603 1593;531 14149 14533 59056;59057 59057 VIQENEHALQK 11 1 0 Unmodified _VIQENEHALQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.8559 2 654.848958 1307.68336 75043.35 0.58694 0.00038436 0.19335 0.00012662 0.78029 0.00051097 654.849175619463 658.85606050723 21.005 0.46591 21.005 20.792 21.258 0 130 21 9 0 0 0 9.5524E-23 2 7277 182.28 157.45 1 0.8183 0.92717 0 155300000 86187000 69111000 37604 2070 14150 14534 59058;59059 59058 VIQENEHALQK 11 1 0 Unmodified _VIQENEHALQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 439.573 3 436.901731 1307.68336 90800.91 -0.15011 -6.5582E-05 0.10021 4.3783E-05 -0.049893 -2.1799E-05 436.901935763048 439.573068578617 20.998 0.56066 20.998 20.792 21.352 0 171 25 11 0 0 0 5.8894E-05 2 7331 84.687 84.687 1 0.81319 0.94341 0 242680000 134020000 108660000 37605 2070 14150 14534 59060;59061 59060 VIQENEHALQK 11 1 0 Unmodified _VIQENEHALQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.8588 2 654.848958 1307.68336 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.223 1 21.223 20.723 21.723 -1.9073E-06 0 0 0 0.0079587 1 7552 61.56 22.597 1 37606 2070 14150 14534 59062 59062 VIQENEHALQK 11 1 0 Unmodified _VIQENEHALQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.8561 2 654.848958 1307.68336 75023.95 0.64763 0.0004241 0.15541 0.00010177 0.80304 0.00052587 654.849045459194 658.856127622041 20.782 0.49722 20.782 20.63 21.127 0 109 20 9 0 0 0 1.1819E-40 3 7020 189.58 167.59 1 0.90741 1.0359 0 154770000 80138000 74631000 37607 2070 14150 14534 59063;59064;59065 59063 VIQENEHALQK 11 1 0 Unmodified _VIQENEHALQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 439.5732 3 436.901731 1307.68336 91067.36 0.10532 4.6013E-05 -0.19669 -8.5935E-05 -0.091375 -3.9922E-05 436.901742690804 439.572995015493 20.773 0.63899 20.773 20.63 21.269 0 138 27 10 0 0 0 1.8072E-08 2 7069 107.06 107.06 1 0.90348 1.0559 0 284890000 143590000 141300000 37608 2070 14150 14534 59066;59067 59066 VIQENEHALQK 11 1 0 Unmodified _VIQENEHALQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.857 2 654.848958 1307.68336 74898.8 0.48441 0.00031722 0.096545 6.3222E-05 0.58096 0.00038044 654.849136969179 658.856095621059 22.966 0.63279 22.966 22.713 23.346 0 143 27 10 0 0 0 5.6003E-06 1 7531 110.53 110.53 1 1.7828 1.4948 0 52121000 18376000 33745000 37609 2070 14150 14534 59068 59068 VIQENEHALQK 11 1 0 Unmodified _VIQENEHALQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 439.573 3 436.901731 1307.68336 90598.71 -0.31339 -0.00013692 0.14147 6.1809E-05 -0.17192 -7.5112E-05 436.902035909244 439.573153830683 22.961 0.80582 22.961 22.753 23.559 -1.9073E-06 150 36 10 0 0 0 0.02875 1 7577 26.954 26.954 1 1.7489 1.4917 0 64773000 23441000 41332000 37610 2070 14150 14534 59069 59069 VIQENEHALQK 11 1 0 Unmodified _VIQENEHALQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.8568 2 654.848958 1307.68336 74235.3 0.36355 0.00023807 0.10193 6.6748E-05 0.46547 0.00030481 654.849133247386 658.856120065443 22.918 0.7989 22.918 22.617 23.416 0 177 33 10 0 0 0 1.2735E-16 2 7043 152.07 131.78 1 1.7458 1.4498 0 36788000 13373000 23415000 37611 2070 14150 14534 59070;59071 59070 VIQENEHALQK 11 1 0 Unmodified _VIQENEHALQK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 436.9018 3 436.901731 1307.68336 89895.45 -0.2575 -0.0001125 -0.056217 -2.4561E-05 -0.31372 -0.00013706 436.902034175901 439.57300579801 22.93 0.86135 22.93 22.484 23.345 1.9073E-06 164 35 9 0 0 0 0.0087767 2 7082 39.657 39.657 1 1.7495 1.46 0 42208000 15521000 26687000 37612 2070 14150 14534 59072;59073 59073 VIQIATSSSTAK 12 1 0 Unmodified _VIQIATSSSTAK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.348 2 603.340435 1204.66632 78666.63 0.87841 0.00052998 -0.19945 -0.00012034 0.67896 0.00040964 603.340214162125 607.34728327233 38.629 0.48889 38.629 38.431 38.92 0 189 40 6 0 0 0 7.1571E-05 2 19877 97.456 97.456 1 1.259 1.3543 0 32977000 15589000 17388000 37613 122 14151 14535 59074;59075 59075 VIQIATSSSTAK 12 1 0 Unmodified _VIQIATSSSTAK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.3408 2 603.340435 1204.66632 78656.16 0.36598 0.00022081 -0.29429 -0.00017756 0.07169 4.3254E-05 603.340316355223 607.347699406599 37.821 0.48325 37.821 37.534 38.017 3.8147E-06 192 36 8 0 0 0 6.5475E-05 2 19652 97.813 97.813 1 1.1009 1.2196 0 46557000 24539000 22018000 37614 122 14151 14535 59076;59077 59076 VIQIATSSSTAK 12 1 0 Unmodified _VIQIATSSSTAK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.3392 2 603.340435 1204.66632 79229.39 0.51475 0.00031057 -0.0032051 -1.9338E-06 0.51154 0.00030863 603.339906743555 607.347622803107 43.76 0.60527 43.76 43.438 44.043 0 196 43 6 0 0 0 0.00022689 1 20654 84.213 84.213 1 1.8011 1.3974 0 3519800 1178600 2341200 37615 122 14151 14535 59078 59078 VIQIATSSSTAK 12 1 0 Unmodified _VIQIATSSSTAK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.3397 2 603.340435 1204.66632 78834.55 0.49334 0.00029765 -0.019526 -1.1781E-05 0.47381 0.00028587 603.340221856139 607.34747604576 43.812 0.55701 43.812 43.532 44.089 0 157 36 6 0 0 0 0.0017293 1 20105 60.398 60.398 1 1.4198 1.1323 0 3089600 1307200 1782400 37616 122 14151 14535 59079 59079 VIQLLFK 7 1 0 Unmodified _VIQLLFK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.7906 2 430.783839 859.553125 92141.2 0.3046 0.00013122 0.16053 6.9154E-05 0.46513 0.00020037 430.783767561652 434.790904912572 96.524 1.2712 96.524 96.141 97.412 0 414 111 6 0 0 0 0.026743 2 59131 77.748 19.79 1 0.86548 0.98167 0 95315000 53581000 41734000 37617 1803 14152 14536 59080;59081 59080 VIQLLFK 7 1 0 Unmodified _VIQLLFK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.7909 2 430.783839 859.553125 92394.15 0.44528 0.00019182 -0.14255 -6.1409E-05 0.30273 0.00013041 430.783678943391 434.790791167601 95.5 1.1491 95.5 95.108 96.258 7.6294E-06 325 96 5 0 0 0 0.026743 2 59194 82.263 30.031 1 0.87266 0.98259 0 69862000 34587000 35276000 37618 1803 14152 14536 59082;59083 59082 VIQLLFK 7 1 0 Unmodified _VIQLLFK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.7914 2 430.783839 859.553125 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.88 1 95.88 95.38 96.38 -7.6294E-06 0 0 0 0.040227 1 59745 69.432 17.201 1 37619 1803 14152 14536 59084 59084 VIQLLFK 7 1 0 Unmodified _VIQLLFK_ 0 0 0 Q59HG1;O95239;Q6PKB2;B4DYE2;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 430.7839 2 430.783839 859.553125 91391.74 -0.057376 -2.4717E-05 0.099063 4.2675E-05 0.041687 1.7958E-05 430.783776867371 434.790879270474 109.71 1.0551 109.71 109.25 110.3 0 222 52 6 0 0 0 0.060366 1 63207 50.307 19.862 1 1.5578 1.213 0 15621000 6615800 9005300 37620 1803 14152 14536 59085 59085 VIQVDEMIVEEEEEEENERK 20 1 1 Oxidation (M) _VIQVDEM(ox)IVEEEEEEENERK_ VIQVDEM(1)IVEEEEEEENERK VIQVDEM(75.36)IVEEEEEEENERK 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.7249 3 831.383008 2491.12719 64633.77 0.40836 0.0003395 0.094179 7.8299E-05 0.50254 0.0004178 831.717507892209 837.724903666056 77.794 0.70853 77.794 77.402 78.111 0 381 54 11 0 0 0 4.5219E-07 1 45974 75.358 72.017 1 1.1921 1.435 0 97101000 43464000 53637000 37621 1789 14153 14537 59086 59086 1655 VIQVDEMIVEEEEEEENERK 20 1 1 Oxidation (M) _VIQVDEM(ox)IVEEEEEEENERK_ VIQVDEM(1)IVEEEEEEENERK VIQVDEM(92.93)IVEEEEEEENERK 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.7181 3 831.383008 2491.12719 64901.55 0.56428 0.00046913 -0.22125 -0.00018394 0.34303 0.00028519 831.717243578996 837.390311833131 78.274 0.85737 78.274 77.976 78.833 0 506 73 10 0 0 0 1.8922E-09 2 46190 92.932 88.904 1 1.1761 1.4186 0 133110000 61394000 71718000 37622 1789 14153 14537 59087;59088 59087 1655 VIQVDEMIVEEEEEEENERK 20 1 1 Oxidation (M) _VIQVDEM(ox)IVEEEEEEENERK_ VIQVDEM(1)IVEEEEEEENERK VIQVDEM(120.4)IVEEEEEEENERK 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 831.7174 3 831.383008 2491.12719 65176.09 0.54567 0.00045366 -0.12059 -0.00010026 0.42508 0.0003534 831.717295863764 837.724803632522 76.859 0.60604 76.859 76.527 77.133 0 384 45 11 0 0 0 3.3025E-18 2 46341 120.4 117.06 1 1.2254 1.4464 0 127750000 63715000 64038000 37623 1789 14153 14537 59089;59090 59089 1655 VIQVDEMIVEEEEEEENERK 20 1 1 Oxidation (M) _VIQVDEM(ox)IVEEEEEEENERK_ VIQVDEM(1)IVEEEEEEENERK VIQVDEM(118.37)IVEEEEEEENERK 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.7256 3 831.383008 2491.12719 64910.41 0.81071 0.00067401 -0.24889 -0.00020692 0.56182 0.00046709 831.717188136922 837.390244382844 77.359 1.0004 77.359 76.981 77.981 0 508 82 11 0 0 0 4.6679E-18 2 46915 118.37 118.37 1 1.1206 1.3232 0 137720000 57684000 80036000 37624 1789 14153 14537 59091;59092 59092 1655 VIQVDEMIVEEEEEEENERK 20 1 1 Oxidation (M) _VIQVDEM(ox)IVEEEEEEENERK_ VIQVDEM(1)IVEEEEEEENERK VIQVDEM(62.36)IVEEEEEEENERK 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.7173 3 831.383008 2491.12719 64719.89 0.45521 0.00037845 -0.056283 -4.6793E-05 0.39892 0.00033166 831.717212494578 837.725046738967 90.008 0.72152 90.008 89.616 90.337 0 400 50 11 0 0 0 1.0536E-06 1 49719 62.362 59.354 1 0.93766 0.82118 0 27387000 13977000 13410000 37625 1789 14153 14537 59093 59093 1655 VIQVDEMIVEEEEEEENERK 20 1 1 Oxidation (M) _VIQVDEM(ox)IVEEEEEEENERK_ VIQVDEM(1)IVEEEEEEENERK VIQVDEM(90.97)IVEEEEEEENERK 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.3909 3 831.383008 2491.12719 65028.47 0.65398 0.00054371 -0.07586 -6.3069E-05 0.57812 0.00048064 831.717300542742 837.724667846198 90.632 1.1586 90.632 90.258 91.417 0 394 71 12 0 0 0 2.4136E-09 2 50137 90.968 88.527 1 1.0241 0.89719 0 27844000 14004000 13839000 37626 1789 14153 14537 59094;59095 59094 1655 VIQVDEMIVEEEEEEENERK 20 1 1 Oxidation (M) _VIQVDEM(ox)IVEEEEEEENERK_ VIQVDEM(1)IVEEEEEEENERK VIQVDEM(41.51)IVEEEEEEENERK 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 837.7257 3 831.383008 2491.12719 63819.29 0.64139 0.00053324 -0.37312 -0.00031021 0.26826 0.00022303 831.717262553276 837.39073131573 107.27 0.5382 107.27 107.06 107.6 0 174 32 8 0 0 0 4.7581E-05 1 61405 41.513 40.551 1 1.7108 1.4537 0 8938900 3527100 5411900 37627 1789 14153 14537 59096 59096 1655 VIQVDEMIVEEEEEEENERK 20 1 1 Oxidation (M) _VIQVDEM(ox)IVEEEEEEENERK_ VIQVDEM(1)IVEEEEEEENERK VIQVDEM(47.5)IVEEEEEEENERK 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 837.7236 3 831.383008 2491.12719 64800.91 0.5281 0.00043906 -0.27652 -0.0002299 0.25158 0.00020916 831.717072544033 837.39036131259 90.48 0.9378 90.48 90.204 91.142 0 355 56 11 0 0 0 1.4166E-05 2 49190 47.499 47.499 1 1.0491 0.89164 0 28597000 13160000 15437000 37628 1789 14153 14537 59097;59098 59097 1655 VIQVDEMIVEEEEEEENERK 20 1 1 Unmodified _VIQVDEMIVEEEEEEENERK_ 0 0 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 832.4139 3 826.051369 2475.13228 68484.57 0.76772 0.00063418 -0.026418 -2.1823E-05 0.7413 0.00061235 826.720125359969 832.392527882392 93.371 0.42968 93.371 93.192 93.622 0 107 35 6 0 0 0 0.0049092 1 56693 30.945 27.418 1 0.62125 0.66865 0 11453000 6658500 4794400 37629 1789 14153 14538 59099 59099 VIQVDEMIVEEEEEEENERK 20 1 1 Unmodified _VIQVDEMIVEEEEEEENERK_ 0 0 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 832.3934 3 826.051369 2475.13228 65693.49 0.81485 0.00067311 -0.28828 -0.00023814 0.52657 0.00043497 826.386008425318 832.05820850176 107.27 0.79478 107.27 107.05 107.84 0 257 45 10 0 0 0 3.8716E-11 3 61394 99.86 92.828 1 1.8188 1.5755 0 15799000 4916000 10883000 37630 1789 14153 14538 59100;59101;59102 59101 VIQVDEMIVEEEEEEENERK 20 1 1 Unmodified _VIQVDEMIVEEEEEEENERK_ 0 0 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.3942 3 826.051369 2475.13228 65351.09 0.73636 0.00060827 -0.1468 -0.00012127 0.58956 0.00048701 826.385777880277 832.058686751476 107.25 1.09 107.25 106.85 107.94 7.6294E-06 341 66 9 0 0 0 2.0192E-05 3 60401 45.094 42.212 1 1.6977 1.4369 0 12143000 4332700 7809900 37631 1789 14153 14538 59103;59104;59105 59103 VIQYLAYVASSHK 13 1 0 Unmodified _VIQYLAYVASSHK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1;Q5BKV1;Q9UMJ0 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.6057 3 493.604915 1477.79291 NaN NaN NaN 0.13824 6.8237E-05 NaN NaN NaN NaN 80.117 0.98215 80.117 79.708 80.69 0 0 0 0 0.0069069 1 47476 46.408 34.794 1 NaN NaN 0 30589000 30589000 0 37632 81 14154 14539 59106 59106 VIQYLAYVASSHK 13 1 0 Unmodified _VIQYLAYVASSHK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1;Q5BKV1;Q9UMJ0 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 493.6048 3 493.604915 1477.79291 NaN NaN NaN 0.1202 5.9332E-05 NaN NaN NaN NaN 78.621 0.92033 78.621 78.255 79.176 0 0 0 0 0.0074702 1 47620 45.434 45.434 1 NaN NaN 0 34837000 34837000 0 37633 81 14154 14539 59107 59107 VIQYLAYVASSHK 13 1 0 Unmodified _VIQYLAYVASSHK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1;Q5BKV1;Q9UMJ0 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.609 3 493.604915 1477.79291 87709.31 0.40187 0.00019837 -0.26949 -0.00013302 0.13239 6.5347E-05 493.604717173617 496.276130083119 91.405 1.0232 91.405 91.112 92.135 -7.6294E-06 294 69 7 0 0 0 0.021631 1 50683 18.015 17.06 1 3.1825 2.5065 0 5795000 1390400 4404600 37634 81 14154 14539 59108 59108 VIQYLAYVASSHK 13 1 0 Unmodified _VIQYLAYVASSHK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1;Q5BKV1;Q9UMJ0 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 496.6093 3 493.604915 1477.79291 85378.87 0.13068 6.4504E-05 -0.48823 -0.00024099 -0.35755 -0.00017649 493.939160015571 496.276106414276 91.154 0.97352 91.154 90.767 91.74 0 264 64 6 0 0 0 0.039747 1 49658 14.228 14.228 1 2.9231 2.3872 0 5639200 1443300 4195900 37635 81 14154 14539 59109 59109 VISALSEQANQR 12 0 1 Unmodified _VISALSEQANQR_ 0 0 0 Q15058 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.3571 2 658.351865 1314.68918 NaN NaN NaN -0.010889 -7.169E-06 NaN NaN NaN NaN 39.164 0.2069 39.164 39.093 39.3 0 0 0 0 2.322E-08 1 20271 111.65 90.188 1 NaN NaN 0 4436500 0 4436500 37636 1751 14155 14540 59110 59110 VISDSESDIGGSDVEFKPDTK 21 2 0 Unmodified _VISDSESDIGGSDVEFKPDTK_ 0 0 1 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 748.3654 3 742.353377 2224.0383 72035.48 0.3335 0.00024758 0.46477 0.00034503 0.79828 0.0005926 742.687700510899 747.696437048159 67.095 0.48551 67.095 66.793 67.278 0 107 35 5 0 0 0 0.00055368 1 38605 34.689 31.14 1 1.7978 2.1238 0 15280000 8074900 7205400 37637 1601 14156 14541 59111 59111 VISDSESDIGGSDVEFKPDTK 21 2 0 Unmodified _VISDSESDIGGSDVEFKPDTK_ 0 0 1 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.0304 3 742.353377 2224.0383 NaN NaN NaN 0.26546 0.00019706 NaN NaN NaN NaN 66.075 0.45085 66.075 65.821 66.272 -7.6294E-06 0 0 0 0.0044161 1 38958 40.381 31.673 1 NaN NaN 0 7720000 0 7720000 37638 1601 14156 14541 59112 59112 VISELNGK 8 1 0 Unmodified _VISELNGK_ 0 0 0 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 430.2476 2 430.247818 858.481082 92328.06 -0.053521 -2.3027E-05 0.17802 7.6592E-05 0.1245 5.3565E-05 430.247874235934 434.25490824494 27.129 0.65488 27.129 26.786 27.441 0 164 32 9 0 0 0 0.0031812 1 12395 97.602 36.108 1 0.77902 0.87073 0 99448000 57529000 41919000 37639 356 14157 14542 59113 59113 VISGVLQLGNIVFK 14 1 0 Unmodified _VISGVLQLGNIVFK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.9606 2 743.953227 1485.8919 70811.86 0.98286 0.0007312 0.059101 4.3968E-05 1.042 0.00077517 743.953299631932 747.960349023286 126.39 0.96704 126.39 126.08 127.05 7.6294E-06 455 69 10 0 0 0 1.4649E-14 3 82072 133.23 133.23 1 1.6811 1.9015 0 147970000 55938000 92036000 37640 81 14158 14543 59114;59115;59116 59114 VISGVLQLGNIVFK 14 1 0 Unmodified _VISGVLQLGNIVFK_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.9613 2 743.953227 1485.8919 70637.02 0.98041 0.00072938 0.1282 9.5373E-05 1.1086 0.00082475 743.953352858816 747.960380467321 125.96 0.98907 125.96 125.63 126.62 0 378 61 10 0 0 0 3.1937E-57 3 83801 192.38 192.38 1 1.6617 1.9113 0 175030000 66137000 108890000 37641 81 14158 14543 59117;59118;59119 59118 VISGVLQLGNIVFKK 15 2 0 Unmodified _VISGVLQLGNIVFKK_ 0 0 1 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3456 3 539.002898 1613.98686 83253.34 0.562 0.00030292 -0.057527 -3.1007E-05 0.50447 0.00027191 539.002600349659 544.345648921722 114.2 0.63351 114.2 113.9 114.53 0 187 46 6 0 0 0 0.00016484 2 72333 40.552 40.552 1 1.8062 2.1527 0 18040000 5623500 12416000 37642 81 14159 14544 59120;59121 59120 VISGVLQLGNIVFKK 15 2 0 Unmodified _VISGVLQLGNIVFKK_ 0 0 1 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 816.0161 2 808.000708 1613.98686 NaN NaN NaN -0.12018 -9.7103E-05 NaN NaN NaN NaN 114.21 0.4528 114.21 113.99 114.44 0 0 0 0 0.015073 1 72433 46.844 32.425 1 NaN NaN 0 2903200 0 2903200 37643 81 14159 14544 59122 59122 VISGVLQLGNIVFKK 15 2 0 Unmodified _VISGVLQLGNIVFKK_ 0 0 1 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.0034 3 539.002898 1613.98686 82927.44 0.65336 0.00035216 -0.23962 -0.00012916 0.41373 0.000223 539.337030713544 544.34571165233 113.43 0.69305 113.43 113.08 113.77 0 195 48 6 0 0 0 5.572E-05 1 73543 49.298 49.298 1 1.9973 2.2829 0 15674000 5489300 10185000 37644 81 14159 14544 59123 59123 VISGVLQLGNIVFKK 15 2 0 Unmodified _VISGVLQLGNIVFKK_ 0 0 1 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.0162 2 808.000708 1613.98686 71076.85 0.72078 0.00058239 -0.44637 -0.00036067 0.27441 0.00022173 808.501569586103 816.014651412762 113.42 0.42776 113.42 113.2 113.62 7.6294E-06 81 30 4 0 0 0 0.0022827 1 73649 47.971 47.971 1 2.0394 2.3243 0 7633200 2825200 4807900 37645 81 14159 14544 59124 59124 VISGVLQLGNIVFKK 15 2 0 Unmodified _VISGVLQLGNIVFKK_ 0 0 1 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.3462 3 539.002898 1613.98686 82592.95 0.79525 0.00042864 -0.22829 -0.00012305 0.56696 0.00030559 539.002663501359 544.34553678621 125.15 0.54924 125.15 124.97 125.52 7.6294E-06 117 21 8 0 0 0 5.5086E-05 2 75099 57.328 57.328 1 3.3819 2.8916 0 11671000 2330600 9340600 37646 81 14159 14544 59125;59126 59126 VISGVLQLGNIVFKK 15 2 0 Unmodified _VISGVLQLGNIVFKK_ 0 0 1 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 816.0164 2 808.000708 1613.98686 68022.17 0.78231 0.00063211 0.69568 0.00056211 1.478 0.0011942 808.502327027261 816.015558179239 125.15 0.42719 125.15 125.04 125.46 0 42 16 4 0 0 0 0.0030146 1 75166 46.73 46.73 1 4.0185 3.4892 0 3434500 444290 2990200 37647 81 14159 14544 59127 59127 VISGVLQLGNIVFKK 15 2 0 Unmodified _VISGVLQLGNIVFKK_ 0 0 1 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.6805 3 539.002898 1613.98686 82920.33 0.74073 0.00039925 -0.14822 -7.9891E-05 0.59251 0.00031936 539.002727111851 544.345630458056 124.96 0.51932 124.96 124.73 125.25 7.6294E-06 112 23 7 0 0 0 0.00034843 2 74044 40.941 40.941 1 3.0643 2.5936 0 14674000 3450300 11224000 37648 81 14159 14544 59128;59129 59129 VISYEEGK 8 1 0 Unmodified _VISYEEGK_ 0 0 0 C9J931;Q6NZ61;A8K005;A0A090N900;Q15382 C9J931 C9J931 RHEB GTP-binding protein Rheb MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.7448 2 462.737283 923.460012 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.75 1 24.75 24.25 25.25 0 0 0 0 0.011377 1 10454 75.109 43.82 1 37649 459 14160 14545 59130 59130 VITDIAGVIPAEK 13 1 0 Unmodified _VITDIAGVIPAEK_ 0 0 0 P35249;H7C1P0 P35249 P35249 RFC4 Replication factor C subunit 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8599 2 663.387385 1324.76022 75531.58 0.71947 0.00047729 -0.15826 -0.00010499 0.56121 0.0003723 663.387361092046 667.394388516101 97.441 0.56319 97.441 97.073 97.636 0 139 49 5 0 0 0 0.020418 1 59331 56.359 56.359 1 1.0838 1.0664 0 23896000 13640000 10255000 37650 1541 14161 14546 59131 59131 VITDIAGVIPAEK 13 1 0 Unmodified _VITDIAGVIPAEK_ 0 0 0 P35249;H7C1P0 P35249 P35249 RFC4 Replication factor C subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3942 2 663.387385 1324.76022 75771.77 0.75347 0.00049984 -0.22773 -0.00015107 0.52574 0.00034877 663.387383556192 667.394326404859 96.7 0.60153 96.7 96.353 96.955 0 198 50 6 0 0 0 0.00031489 1 60226 64.918 64.918 1 1.1504 1.2349 0 37353000 17028000 20325000 37651 1541 14161 14546 59132 59132 VITEYLNAQESAK 13 1 0 Unmodified _VITEYLNAQESAK_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 737.3887 2 733.380288 1464.74602 NaN NaN NaN 1.823 0.001337 NaN NaN NaN NaN 74.551 1.0327 74.551 73.812 74.844 7.6294E-06 0 0 0 0.00609 1 39534 55.258 29.319 1 NaN NaN 0 2178700 0 2178700 37652 618 14162 14547 59133 59133 VITFANQDDYISFR 14 0 1 Unmodified _VITFANQDDYISFR_ 0 0 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.9176 2 844.917569 1687.82059 65219.74 0.80132 0.00067705 0.43528 0.00036778 1.2366 0.0010448 844.917268538669 849.922989005842 106 0.73866 106 105.65 106.39 -7.6294E-06 281 53 8 0 0 0 1.8633E-09 2 65590 143.97 143.97 1 0.85593 0.94444 0 55534000 29483000 26052000 37653 1286 14163 14548 59134;59135 59134 VITFANQDDYISFR 14 0 1 Unmodified _VITFANQDDYISFR_ 0 0 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.9249 2 844.917569 1687.82059 65319.06 0.86842 0.00073375 0.61523 0.00051982 1.4837 0.0012536 844.917317121926 850.42401434661 105.31 0.79824 105.31 104.96 105.76 0 315 59 9 0 0 0 3.0632E-15 2 66812 136.96 136.96 1 0.9025 1.0261 0 121550000 62779000 58767000 37654 1286 14163 14548 59136;59137 59137 VITFANQDDYISFR 14 0 1 Unmodified _VITFANQDDYISFR_ 0 0 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 844.9185 2 844.917569 1687.82059 66912.08 0.56889 0.00048067 0.60979 0.00051522 1.1787 0.00099589 844.917694715404 850.424566426408 117.22 0.8282 117.22 116.92 117.75 0 207 36 10 0 0 0 3.7449E-06 1 68942 122.51 122.51 1 0.81845 0.69116 0 29572000 15408000 14163000 37655 1286 14163 14548 59138 59138 VITFANQDDYISFR 14 0 1 Unmodified _VITFANQDDYISFR_ 0 0 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 844.9187 2 844.917569 1687.82059 66790.27 0.62794 0.00053056 1.0688 0.00090306 1.6968 0.0014336 844.917937067485 850.425310765741 117.08 0.91337 117.08 116.72 117.64 -7.6294E-06 200 41 9 0 0 0 1.3952E-05 1 67934 115.29 109.56 1 0.83421 0.72294 0 23671000 12136000 11535000 37656 1286 14163 14548 59139 59139 VITIMQNPR 9 0 1 Oxidation (M) _VITIM(ox)QNPR_ VITIM(1)QNPR VITIM(120.62)QNPR 0 1 0 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.3045 2 544.300059 1086.58556 NaN NaN NaN -0.53015 -0.00028856 NaN NaN NaN NaN 35.068 0.62228 35.068 34.85 35.472 3.8147E-06 0 0 0 9.1993E-08 1 17792 120.62 89.318 1 NaN NaN 0 89751000 0 89751000 37657 1639 14164 14549 59140 59140 1419 VITIMQNPR 9 0 1 Oxidation (M) _VITIM(ox)QNPR_ VITIM(1)QNPR VITIM(41.02)QNPR 0 1 0 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.3046 2 544.300059 1086.58556 NaN NaN NaN -0.4968 -0.00027041 NaN NaN NaN NaN 41.085 0.49928 41.085 40.839 41.338 0 0 0 0 0.023636 1 18989 41.025 21.548 1 NaN NaN 0 1710300 0 1710300 37658 1639 14164 14549 59141 59141 1419 VITIMQNPR 9 0 1 Unmodified _VITIMQNPR_ 0 0 0 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.3024 2 536.302601 1070.59065 82677.83 0.44217 0.00023714 -0.3099 -0.0001662 0.13227 7.0937E-05 536.302306568383 541.306634295061 66.944 0.73679 66.944 66.447 67.183 0 131 44 4 0 0 0 0.036972 1 34052 43.246 39.047 1 0.94691 0.83757 0 2424800 1195800 1229000 37659 1639 14164 14550 59142 59142 VITMFVQR 8 0 1 Oxidation (M) _VITM(ox)FVQR_ VITM(1)FVQR VITM(54.2)FVQR 0 1 0 P13010;Q53TC2;C9JZ81;H7C0H9 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.2826 2 505.278595 1008.54264 83791.28 0.42773 0.00021612 -0.033166 -1.6758E-05 0.39456 0.00019936 505.2785161052 510.282507753071 50.497 0.99435 50.497 50.219 51.214 -3.8147E-06 386 86 6 0 0 0 0.013069 2 28416 54.205 54.205 1 0.58736 0.67071 0 147860000 86490000 61368000 37660 1476 14165 14551 59143;59144 59144 1223 VITMFVQR 8 0 1 Unmodified _VITMFVQR_ 0 0 0 P13010;Q53TC2;C9JZ81;H7C0H9 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.281 2 497.281137 992.547722 95333.61 0.18473 9.1865E-05 -0.051246 -2.5484E-05 0.13349 6.6381E-05 497.281130911554 502.285153302451 83.466 0.72672 83.466 83.369 84.096 0 89 55 5 0 0 0 0.0010255 1 45500 114.72 100.72 1 0.72084 0.61857 0 8325600 3742600 4583000 37661 1476 14165 14552 59145 59145 VITMFVQR 8 0 1 Unmodified _VITMFVQR_ 0 0 0 P13010;Q53TC2;C9JZ81;H7C0H9 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.2808 2 497.281137 992.547722 90974.92 0.28558 0.00014201 0.017112 8.5095E-06 0.30269 0.00015052 497.281129768001 502.285241110898 83.59 0.39574 83.59 83.466 83.862 0 59 23 4 0 0 0 0.0011443 1 44772 111.73 95.433 1 0.7431 0.61782 0 7522900 4273800 3249100 37662 1476 14165 14552 59146 59146 VITYLDHSTQK 11 1 0 Unmodified _VITYLDHSTQK_ 0 0 0 Q13619;A0A0A0MR50;B2RBV7 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.8445 2 652.845884 1303.67722 76449.04 0.50755 0.00033135 0.019809 1.2932E-05 0.52736 0.00034428 652.845728965672 656.853076440864 32.868 0.38077 32.868 32.659 33.039 0 113 35 5 0 0 0 6.1182E-10 1 16354 128.35 106.9 1 0.88737 0.95631 0 21710000 11718000 9992100 37663 1718 14166 14553 59147 59147 VIVAVGDR 8 0 1 Unmodified _VIVAVGDR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.7501 2 414.750527 827.486502 94699.38 0.20008 8.2985E-05 -0.5366 -0.00022255 -0.33651 -0.00013957 414.750321045245 419.754123936903 39.137 0.56208 39.137 38.827 39.389 0 131 47 4 0 0 0 0.032325 1 20557 50.703 12.57 1 0.62725 0.6348 0 20001000 12208000 7793500 37664 1937 14167 14554 59148 59148 VIVDANNLTVEIENELNIIHK 21 1 0 Unmodified _VIVDANNLTVEIENELNIIHK_ 0 0 0 B4DWW8;E7EVX8;Q8WWY3;E7EU94;E7ESX0;E7EN72 B4DWW8 B4DWW8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 800.1084 3 797.435706 2389.28529 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.6 1 129.6 129.1 130.1 0 0 0 0 0.00010341 1 84456 66.152 51.062 1 37665 1046 14168 14555 59149 59149 VIVDANNLTVEIENELNIIHK 21 1 0 Unmodified _VIVDANNLTVEIENELNIIHK_ 0 0 0 B4DWW8;E7EVX8;Q8WWY3;E7EU94;E7ESX0;E7EN72 B4DWW8 B4DWW8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.7711 3 797.435706 2389.28529 76507.28 0.93546 0.00074597 -0.32938 -0.00026266 0.60608 0.00048331 797.770233006643 800.440324457265 129.2 0.38541 129.2 129.08 129.46 1.5259E-05 58 21 5 0 0 0 1.8681E-08 3 86243 71.742 71.742 1 1.0276 1.0367 0 7866100 3801100 4065000 37666 1046 14168 14555 59150;59151;59152 59150 VIVDFAGSSK 10 1 0 Unmodified _VIVDFAGSSK_ 0 0 0 F8W6G5;C9JZ40;F5HRF8;A0A0A0MRW7;Q7Z2E3 F8W6G5 F8W6G5 APTX Aprataxin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.7869 2 511.779482 1021.54441 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.946 1 58.946 58.446 59.446 0 0 0 0 0.023512 1 34287 52.725 17.918 1 37667 472 14169 14556 59153 59153 VIVDFSSPNIAK 12 1 0 Unmodified _VIVDFSSPNIAK_ 0 0 0 P54136 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.3639 2 645.358628 1288.7027 NaN NaN NaN 0.081056 5.231E-05 NaN NaN NaN NaN 87.337 0.52292 87.337 87.083 87.606 7.6294E-06 0 0 0 0.0022413 1 52633 68.893 38.639 1 NaN NaN 0 10476000 0 10476000 37668 1609 14170 14557 59154 59154 VIVDFSSPNIAK 12 1 0 Unmodified _VIVDFSSPNIAK_ 0 0 0 P54136 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.3651 2 645.358628 1288.7027 NaN NaN NaN 0.0070991 4.5815E-06 NaN NaN NaN NaN 86.452 0.25952 86.452 86.257 86.517 7.6294E-06 0 0 0 0.015929 1 53188 52.725 19.885 1 NaN NaN 0 6633600 0 6633600 37669 1609 14170 14557 59155 59155 VIVMSATLDAGK 12 1 0 Oxidation (M) _VIVM(ox)SATLDAGK_ VIVM(1)SATLDAGK VIVM(51.76)SATLDAGK 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.832 2 610.831388 1219.64822 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.517 1 50.517 50.017 51.017 0 0 0 0 0.0088984 1 28536 51.762 27.607 1 37670 1379 14171 14558 59156 59156 1051 VIVMSATLDAGK 12 1 0 Oxidation (M) _VIVM(ox)SATLDAGK_ VIVM(1)SATLDAGK VIVM(76.23)SATLDAGK 0 1 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.832 2 610.831388 1219.64822 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.668 1 50.668 50.168 51.168 0 0 0 0 0.00035011 1 28629 76.228 55.326 1 37671 1379 14171 14558 59157 59157 1051 VIVSDVQESFIWVR 14 0 1 Unmodified _VIVSDVQESFIWVR_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.957 2 838.953955 1675.89336 NaN NaN NaN -2.8568 -0.0023967 NaN NaN NaN NaN 116.45 0.38618 116.45 116.3 116.69 0 0 0 0 0.019165 1 76247 45.879 26.118 1 NaN NaN 0 1575400 0 1575400 37672 764 14172 14559 59158 59158 VIVVGDLSVGK 11 1 0 Unmodified _VIVVGDLSVGK_ 0 0 0 C9JY26;Q6NXT3;A0A024QZ68;Q9BZG1;C9JBG0;Q96PJ7;E7ES60;B4DNC0;K7EIF2;H7C0Y7 C9JY26 C9JY26 RAB34 Ras-related protein Rab-34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.3316 2 543.331882 1084.64921 84555.71 0.67683 0.00036774 0.65672 0.00035682 1.3335 0.00072456 543.332118780365 547.339188111314 88.701 0.29755 88.701 88.585 88.882 0 70 22 5 0 0 0 0.0036568 1 53546 59.426 45.219 1 2.2883 2.3575 0 12861000 4113500 8747800 37673 13 14173 14560 59159 59159 VIVVGDLSVGK 11 1 0 Unmodified _VIVVGDLSVGK_ 0 0 0 C9JY26;Q6NXT3;A0A024QZ68;Q9BZG1;C9JBG0;Q96PJ7;E7ES60;B4DNC0;K7EIF2;H7C0Y7 C9JY26 C9JY26 RAB34 Ras-related protein Rab-34 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 547.3395 2 543.331882 1084.64921 83386.27 0.65502 0.00035589 1.2068 0.00065567 1.8618 0.0010116 543.332402278938 547.339449197712 87.657 0.30244 87.657 87.533 87.835 -7.6294E-06 66 22 4 0 0 0 0.00076687 2 54009 72.643 47.956 1 2.6029 2.7468 0 23706000 5234800 18471000 37674 13 14173 14560 59160;59161 59160 VIYVLPMLTIK 11 1 0 Oxidation (M) _VIYVLPM(ox)LTIK_ VIYVLPM(1)LTIK VIYVLPM(59.8)LTIK 0 1 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.4037 2 653.396167 1304.77778 76888.35 1.3199 0.00086241 -0.60417 -0.00039476 0.71572 0.00046765 653.395785170124 657.402832713601 118.34 0.49715 118.34 118.06 118.55 7.6294E-06 94 30 4 0 0 0 0.0016713 2 75876 59.8 59.8 1 2.0577 2.0386 0 8257700 2876800 5380900 37675 883 14174 14561 59162;59163 59162 697 VIYVLPMLTIK 11 1 0 Oxidation (M) _VIYVLPM(ox)LTIK_ VIYVLPM(1)LTIK VIYVLPM(72.55)LTIK 0 1 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.4044 2 653.396167 1304.77778 79023.55 1.058 0.00069127 -0.34829 -0.00022757 0.70968 0.0004637 653.396147693696 657.402958589795 117.78 0.51637 117.78 117.56 118.08 0 106 35 5 0 0 0 0.0003776 3 77282 72.547 72.547 1 2.9972 3.0918 0 9647200 2577300 7070000 37676 883 14174 14561 59164;59165;59166 59165 697 VKLEAEIATYR 11 1 1 Unmodified _VKLEAEIATYR_ 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 437.5859 3 431.578477 1291.7136 92983.3 -0.45385 -0.00019587 0.41105 0.0001774 -0.042796 -1.847E-05 431.578667316091 437.586051134671 70.661 0.59746 70.661 70.379 70.977 0 141 39 6 0 0 0 0.036184 1 37117 22.329 22.329 1 1.2901 1.0588 0 4568300 1779400 2788900 + 37677 316;1155 14175 14562 59167 59167 VKPAPDETSFSEALLK 16 2 0 Unmodified _VKPAPDETSFSEALLK_ 0 0 1 B4DY09;Q53FG3;F4ZW62;Q12905;X6R6Z1;A0A0A0MRL0 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 577.9771 3 577.976965 1730.90907 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.299 1 80.299 79.799 80.799 7.6294E-06 0 0 0 0.00050349 1 48921 62.237 47.24 1 37678 1049 14176 14563 59168 59168 VKPDVVQDK 9 2 0 Unmodified _VKPDVVQDK_ 0 0 1 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 522.3068 2 514.292756 1026.57096 83536.13 0.10557 5.4292E-05 -0.21014 -0.00010807 -0.10457 -5.3781E-05 514.292510405267 522.306853507608 18.521 0.2925 18.521 18.353 18.645 0 32 9 7 0 0 0 0.0001362 2 5456 113.71 83.54 1 0.87731 1.0356 0 74249000 38716000 35533000 37679 2134 14177 14564 59169;59170 59169 VKPDVVQDK 9 2 0 Unmodified _VKPDVVQDK_ 0 0 1 Q9Y3B9;A8K201 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.293 2 514.292756 1026.57096 86087.75 0.26389 0.00013572 -0.0030075 -1.5467E-06 0.26088 0.00013417 514.292665422586 522.306928846674 18.411 0.34777 18.411 18.285 18.633 0 34 11 5 0 0 0 0.0098113 1 5157 80.438 61.656 1 0.78795 0.91305 0 61645000 33092000 28553000 37680 2134 14177 14564 59171 59171 VKPLLQVSR 9 1 1 Unmodified _VKPLLQVSR_ 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 347.2259 3 347.225598 1038.65496 99934.05 0.45131 0.00015671 -0.15775 -5.4776E-05 0.29356 0.00010193 347.22554546251 353.232956015199 39.735 0.38478 39.735 39.562 39.947 0 150 32 7 0 0 0 0.0008314 2 21088 80.688 7.4552 1 1.4677 1.7348 0 160260000 59489000 100770000 37681 81 14178 14565 59172;59173 59173 VKPTELCAGHLIGGTDSCQGDSGGPLVCFEK 31 2 0 Unmodified _VKPTELCAGHLIGGTDSCQGDSGGPLVCFEK_ 0 0 1 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 823.6402 4 823.13761 3288.52133 NaN NaN NaN -0.50059 -0.00041206 NaN NaN NaN NaN 106.35 0.75691 106.35 106.08 106.84 -7.6294E-06 0 0 0 1.6201E-12 1 60755 66.454 64.047 1 NaN NaN 0 33900000 33900000 0 + 37682 1157 14179 14566 59174 59174 VKPTELCAGHLIGGTDSCQGDSGGPLVCFEK 31 2 0 Unmodified _VKPTELCAGHLIGGTDSCQGDSGGPLVCFEK_ 0 0 1 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 823.3893 4 823.13761 3288.52133 NaN NaN NaN -0.37479 -0.0003085 NaN NaN NaN NaN 106.12 0.95573 106.12 105.67 106.63 0 0 0 0 0.00055306 2 59685 33.234 31.151 1 NaN NaN 0 22197000 22197000 0 + 37683 1157 14179 14566 59175;59176 59176 VKPYLPMIIAPLFR 14 1 1 Oxidation (M) _VKPYLPM(ox)IIAPLFR_ VKPYLPM(1)IIAPLFR VKPYLPM(51.21)IIAPLFR 0 1 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.673 3 558.665228 1672.97386 81691.44 0.92789 0.00051838 -0.21741 -0.00012146 0.71048 0.00039692 558.999277131555 564.672636183439 121.87 0.64498 121.87 121.63 122.28 0 136 42 4 0 0 0 0.00044767 2 78713 51.211 48.849 1 1.9326 2.079 0 11560000 2678400 8881400 37684 1412 14180 14567 59177;59178 59177 1106 VKPYLPMIIAPLFR 14 1 1 Oxidation (M) _VKPYLPM(ox)IIAPLFR_ VKPYLPM(1)IIAPLFR VKPYLPM(56.12)IIAPLFR 0 1 1 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.6732 3 558.665228 1672.97386 81486.35 0.88473 0.00049427 -0.50155 -0.0002802 0.38318 0.00021407 558.999417116954 564.672460028361 121.08 0.60602 121.08 120.82 121.42 -7.6294E-06 149 37 6 0 0 0 0.00027522 1 80044 56.122 56.122 1 1.9506 2.1681 0 10503000 2860000 7643200 37685 1412 14180 14567 59179 59179 1106 VKVEEEEEEK 10 2 0 Unmodified _VKVEEEEEEK_ 0 0 1 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.3039 2 624.303715 1246.59288 76084.08 0.43384 0.00027085 -0.11165 -6.9702E-05 0.32219 0.00020114 624.303816693805 632.317903587814 16.781 0.66265 16.781 16.604 17.266 0 70 21 7 0 0 0 3.0399E-31 1 4039 188.28 131.9 1 0.80117 0.94575 0 64141000 35063000 29078000 37686 2129 14181 14568 59180 59180 VLAATDLDAEEEVVAGEFGSR 21 0 1 Unmodified _VLAATDLDAEEEVVAGEFGSR_ 0 0 0 G3V1S1;B3KTH1;B3KRG2;A8K359;P19447;Q53HW5 G3V1S1 G3V1S1 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1089.5402 2 1089.53168 2177.04881 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.24 1 115.24 114.74 115.74 7.6294E-06 0 0 0 0.0019898 1 75151 52.265 38.586 1 37687 717 14182 14569 59181 59181 VLADPSDDTK 10 1 0 Unmodified _VLADPSDDTK_ 0 0 0 A0A075B730;A0A087X1U6;P58107;Q15149;D3DWL0 A0A075B730;P58107;Q15149 Q15149 EPPK1;PLEC;PLEC1 Epiplakin;Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7612 2 530.761486 1059.50842 81356.59 0.16452 8.7322E-05 -0.077132 -4.0939E-05 0.08739 4.6383E-05 530.761522300429 534.768488271955 24.629 0.50286 24.629 24.364 24.867 -1.9073E-06 77 20 5 0 0 0 2.8741E-08 2 10278 120.12 96.691 1 1.9017 2.1454 0 132540000 47254000 85291000 37688 1754;397;1622 14183 14570 59182;59183 59183 VLADPSDDTK 10 1 0 Unmodified _VLADPSDDTK_ 0 0 0 A0A075B730;A0A087X1U6;P58107;Q15149;D3DWL0 A0A075B730;P58107;Q15149 Q15149 EPPK1;PLEC;PLEC1 Epiplakin;Plectin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7614 2 530.761486 1059.50842 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.403 1 24.403 23.903 24.903 0 0 0 0 0.00016372 1 10144 80.231 56.803 1 37689 1754;397;1622 14183 14570 59184 59184 VLADPSDDTK 10 1 0 Unmodified _VLADPSDDTK_ 0 0 0 A0A075B730;A0A087X1U6;P58107;Q15149;D3DWL0 A0A075B730;P58107;Q15149 Q15149 EPPK1;PLEC;PLEC1 Epiplakin;Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.7686 2 530.761486 1059.50842 82755.35 0.39157 0.00020783 -0.30907 -0.00016404 0.082509 4.3793E-05 530.761460258228 534.768353818187 27.041 0.48666 27.041 26.822 27.309 0 120 25 7 0 0 0 0.0088882 2 10359 55.461 46.067 1 2.3553 1.8652 0 4941200 1393000 3548300 37690 1754;397;1622 14183 14570 59185;59186 59185 VLAEDEELYGDFEDLETGDVHK 22 1 0 Unmodified _VLAEDEELYGDFEDLETGDVHK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.7186 3 841.718496 2522.13366 66565.19 0.9493 0.00079905 0.075024 6.3149E-05 1.0243 0.00086219 842.052866263833 844.724250889636 108.37 0.89771 108.37 107.95 108.85 0 480 65 11 0 0 0 2.6631E-08 1 67484 62.19 62.19 1 0.93722 1.0577 0 110110000 54122000 55991000 37691 1742 14184 14571 59187 59187 VLAEDEELYGDFEDLETGDVHK 22 1 0 Unmodified _VLAEDEELYGDFEDLETGDVHK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.0532 3 841.718496 2522.13366 66649.73 0.86451 0.00072768 -0.037712 -3.1743E-05 0.8268 0.00069593 842.052814703676 844.724147260719 107.78 0.87009 107.78 107.39 108.26 0 456 62 11 0 0 0 3.105E-09 1 68703 79.635 79.635 1 0.99531 1.112 0 90482000 52141000 38341000 37692 1742 14184 14571 59188 59188 VLAEDEELYGDFEDLETGDVHK 22 1 0 Unmodified _VLAEDEELYGDFEDLETGDVHK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 842.0533 3 841.718496 2522.13366 65886.47 0.9047 0.0007615 -0.070851 -5.9637E-05 0.83385 0.00070187 842.052585934872 844.724020118016 119.45 1.1608 119.45 119.07 120.23 -7.6294E-06 304 51 12 0 0 0 0.0004945 2 70638 33.348 33.348 1 1.3129 1.0806 0 39904000 16121000 23783000 37693 1742 14184 14571 59189;59190 59189 VLAEDEELYGDFEDLETGDVHK 22 1 0 Unmodified _VLAEDEELYGDFEDLETGDVHK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 844.7241 3 841.718496 2522.13366 66443.86 0.63194 0.00053192 -0.061652 -5.1893E-05 0.57029 0.00048002 842.052610702366 844.72390870738 119.27 1.0282 119.27 118.96 119.98 0 302 44 12 0 0 0 5.6892E-30 2 69691 135.21 135.21 1 1.4449 1.2023 0 39017000 14677000 24340000 37694 1742 14184 14571 59191;59192 59191 VLAFLSSVAGDALTR 15 0 1 Unmodified _VLAFLSSVAGDALTR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.428 2 760.427573 1518.84059 72208.8 0.7843 0.0005964 0.10464 7.957E-05 0.88894 0.00067597 760.427591781874 765.431106290089 119.6 0.52797 119.6 119.36 119.88 0 91 34 5 0 0 0 0.00019854 1 76918 76.522 76.522 1 0.84596 0.8637 0 9970900 5918600 4052300 37695 1205 14185 14572 59193 59193 VLAFLSSVAGDALTR 15 0 1 Unmodified _VLAFLSSVAGDALTR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.4324 2 760.427573 1518.84059 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.47 1 119.47 118.97 119.97 0 0 0 0 7.1357E-07 1 76858 97.214 71.555 1 37696 1205 14185 14572 59194 59194 VLAFLSSVAGDALTR 15 0 1 Unmodified _VLAFLSSVAGDALTR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.432 2 760.427573 1518.84059 72372.93 0.71689 0.00054514 0.51997 0.0003954 1.2369 0.00094054 760.428114995649 765.432271043671 119.08 0.48853 119.08 118.84 119.33 -7.6294E-06 112 32 6 0 0 0 2.6983E-07 2 78417 107.18 92.203 1 1.1339 1.1135 0 14150000 6502000 7648500 37697 1205 14185 14572 59195;59196 59196 VLAFLSSVAGDALTR 15 0 1 Unmodified _VLAFLSSVAGDALTR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.4324 2 760.427573 1518.84059 75337.34 1.082 0.00082278 1.6079 0.0012227 2.6899 0.0020455 760.429362356851 765.432261232529 131.61 0.52164 131.61 131.41 131.93 0 43 18 5 0 0 0 0.00040604 1 79010 58.172 54.126 1 1.0611 0.93778 0 3710800 1821000 1889800 37698 1205 14185 14572 59197 59197 VLAFLVLSR 9 0 1 Unmodified _VLAFLVLSR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.3312 2 509.326402 1016.63825 83837.49 0.63416 0.00032299 0.12701 6.4688E-05 0.76117 0.00038768 509.326431781994 514.330399666263 114.98 0.82663 114.98 114.72 115.55 0 215 53 6 0 0 0 0.0019814 2 73052 78.334 65.311 1 1.0532 1.088 0 37132000 17639000 19494000 37699 2139 14186 14573 59198;59199 59199 VLAFLVLSR 9 0 1 Unmodified _VLAFLVLSR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.3309 2 509.326402 1016.63825 84251.64 0.59069 0.00030086 -0.21356 -0.00010877 0.37713 0.00019208 509.326186699363 514.330305053711 114.35 0.86428 114.35 114.04 114.91 7.6294E-06 233 56 6 0 0 0 0.0018407 2 74321 80.165 73.346 1 1.0154 1.0332 0 20497000 10254000 10243000 37700 2139 14186 14573 59200;59201 59201 VLAFLVLSR 9 0 1 Unmodified _VLAFLVLSR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.3307 2 509.326402 1016.63825 85157.11 0.76417 0.00038921 -0.14681 -7.4776E-05 0.61735 0.00031443 509.326274120136 514.330257801626 126.32 0.92302 126.32 126.06 126.98 0 119 34 7 0 0 0 0.046824 1 75884 39.305 23.102 1 1.0682 0.89321 0 3721200 1682500 2038800 37701 2139 14186 14573 59202 59202 VLAFLVLSR 9 0 1 Unmodified _VLAFLVLSR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.331 2 509.326402 1016.63825 84079.63 0.48887 0.00024899 -0.042235 -2.1512E-05 0.44664 0.00022748 509.326258698735 514.330344076032 126.09 0.91896 126.09 125.85 126.77 0 149 39 6 0 0 0 0.014775 2 74795 55.37 42.412 1 0.89044 0.78704 0 3753200 2060200 1693000 37702 2139 14186 14573 59203;59204 59203 VLAGETLSVNDPPDVLDR 18 0 1 Unmodified _VLAGETLSVNDPPDVLDR_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7;K7EKJ9;K7EQR9 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 961.0023 2 955.496912 1908.97927 NaN NaN NaN -0.12683 -0.00012119 NaN NaN NaN NaN 101.95 0.49013 101.95 101.68 102.17 0 0 0 0 1.2512E-31 1 62649 139.46 116.99 1 NaN NaN 0 5674700 0 5674700 37703 220 14187 14574 59205 59205 VLAGETLSVNDPPDVLDR 18 0 1 Unmodified _VLAGETLSVNDPPDVLDR_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7;K7EKJ9;K7EQR9 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 961.0049 2 955.496912 1908.97927 62415.61 0.63063 0.00060257 -0.22384 -0.00021388 0.40679 0.00038869 955.997849157358 960.500525852034 101.32 0.50666 101.32 101.07 101.57 -7.6294E-06 204 41 6 0 0 0 2.2496E-05 1 63653 71.176 71.176 1 1.4681 1.4573 0 16041000 7431100 8609800 37704 220 14187 14574 59206 59206 VLAGETLSVNDPPDVLDR 18 0 1 Unmodified _VLAGETLSVNDPPDVLDR_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7;K7EKJ9;K7EQR9 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 961.0032 2 955.496912 1908.97927 64028.14 0.79282 0.00075754 -0.0087465 -8.3573E-06 0.78408 0.00074918 955.497082208287 960.500690944861 113.9 0.437 113.9 113.7 114.14 0 83 19 7 0 0 0 0.010614 1 66421 28.812 28.812 1 1.0465 0.87465 0 3455500 1606900 1848600 37705 220 14187 14574 59207 59207 VLAGETLSVNDPPDVLDR 18 0 1 Unmodified _VLAGETLSVNDPPDVLDR_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;Q59GP7;K7EKJ9;K7EQR9 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 960.5007 2 955.496912 1908.97927 63705.13 0.37984 0.00036294 0.34871 0.00033319 0.72855 0.00069613 955.998288302911 961.003166241096 113.86 0.34502 113.86 113.63 113.98 7.6294E-06 81 16 7 0 0 0 0.00090192 1 65471 39.424 39.424 1 1.0299 0.8777 0 3188800 1497400 1691300 37706 220 14187 14574 59208 59208 VLAIGDEK 8 1 0 Unmodified _VLAIGDEK_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.7423 2 422.742368 843.470183 94786.68 -0.15494 -6.5502E-05 -0.28147 -0.00011899 -0.43642 -0.00018449 422.742312176088 426.749350772289 38.256 0.57874 38.256 37.92 38.499 0 133 45 5 0 0 0 0.020081 1 20070 58.716 23.467 1 1.0302 1.0579 0 25373000 12359000 13014000 37707 1699 14188 14575 59209 59209 VLALELFEQITK 12 1 0 Unmodified _VLALELFEQITK_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 706.4191 2 702.41086 1402.80717 73405.36 1.1877 0.00083424 -0.23938 -0.00016814 0.94831 0.0006661 702.410492045084 706.418006490331 131.03 0.89236 131.03 130.65 131.55 0 201 58 5 0 0 0 8.6843E-06 2 85271 108.67 91.642 1 1.3794 1.4083 0 10456000 5068800 5386800 37708 1111 14189 14576 59210;59211 59210 VLALELFEQITK 12 1 0 Unmodified _VLALELFEQITK_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.4118 2 702.41086 1402.80717 73308.03 0.96219 0.00067585 -0.061124 -4.2934E-05 0.90106 0.00063292 702.912478903605 706.417773696503 130.58 0.95316 130.58 130.17 131.12 0 299 65 6 0 0 0 0.00020181 2 87266 89.827 71.962 1 1.4251 1.43 0 13759000 5845100 7913500 37709 1111 14189 14576 59212;59213 59213 VLALPEPSPAAPTLR 15 0 1 Unmodified _VLALPEPSPAAPTLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 771.4504 2 766.445766 1530.87698 69230.93 0.7343 0.0005628 -0.061133 -4.6855E-05 0.67317 0.00051595 766.445831785974 771.449595576102 101.53 0.70966 101.53 101.23 101.94 -7.6294E-06 276 54 7 0 0 0 0.00022356 2 62308 69.451 69.451 1 1.3526 1.3924 0 36631000 15721000 20910000 37710 1754 14190 14577 59214;59215 59214 VLALPEPSPAAPTLR 15 0 1 Unmodified _VLALPEPSPAAPTLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.4467 2 766.445766 1530.87698 69819.66 0.5473 0.00041948 -0.13684 -0.00010488 0.41046 0.0003146 766.445809274416 771.44964695419 100.87 0.71024 100.87 100.57 101.28 7.6294E-06 298 55 8 0 0 0 4.395E-06 2 63341 97.214 97.214 1 1.4473 1.581 0 37787000 15430000 22357000 37711 1754 14190 14577 59216;59217 59217 VLALPSHR 8 0 1 Unmodified _VLALPSHR_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 301.5199 3 298.183622 891.529036 109575.3 0.14415 4.2984E-05 0.047768 1.4244E-05 0.19192 5.7228E-05 298.183590168117 301.519640580426 33.243 0.70195 33.243 32.761 33.463 0 221 64 5 0 0 0 0.028586 1 16495 33.263 6.0085 1 0.85911 0.97506 0 48525000 24653000 23872000 37712 214 14191 14578 59218 59218 VLALPSHR 8 0 1 Unmodified _VLALPSHR_ 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.772 2 446.771794 891.529036 NaN NaN NaN 0.27271 0.00012184 NaN NaN NaN NaN 33.345 0.40221 33.345 33.094 33.497 0 0 0 0 0.03914 1 16702 54.205 39.792 1 NaN NaN 0 8490500 8490500 0 37713 214 14191 14578 59219 59219 VLALQAR 7 0 1 Unmodified _VLALQAR_ 0 0 0 Q96SB4;A8K8B2 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 385.7479 2 385.747788 769.481023 97279.3 0.13174 5.0817E-05 -0.17866 -6.8918E-05 -0.046925 -1.8101E-05 385.747656306315 390.751723340195 40.177 0.6042 40.177 39.869 40.473 0 154 50 5 0 0 0 0.026837 1 20991 80.377 0 1 1.8586 1.9013 0 33608000 12271000 21337000 37714 1988 14192 14579 59220 59220 VLALQAR 7 0 1 Unmodified _VLALQAR_ 0 0 0 Q96SB4;A8K8B2 Q96SB4 Q96SB4 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 385.7474 2 385.747788 769.481023 97783.62 0.20598 7.9455E-05 -0.38718 -0.00014935 -0.18121 -6.99E-05 385.747553264101 390.751682908797 39.173 0.53802 39.173 38.928 39.466 -3.8147E-06 138 47 4 0 0 0 0.026837 1 20731 80.377 0 1 2.0861 2.3234 0 43709000 12158000 31552000 37715 1988 14192 14579 59221 59221 VLALSVETDYTFPLAEK 17 1 0 Unmodified _VLALSVETDYTFPLAEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;Q6NSF2;F8VWS0;Q53HK9;F8VW21;F8VZS0;B4E3D5;F8W1K8;Q3MHV2 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 952.5114 2 948.503674 1894.9928 61797.57 0.89867 0.0008524 -0.079675 -7.5572E-05 0.819 0.00077682 949.004955671171 953.012009859837 120.67 1.0282 120.67 120.21 121.24 0 431 72 11 0 0 0 1.1223E-18 2 77724 136.3 114.74 1 1.0051 1.1683 0 251870000 123160000 128710000 37716 345 14193 14580 59222;59223 59223 VLALSVETDYTFPLAEK 17 1 0 Unmodified _VLALSVETDYTFPLAEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;Q6NSF2;F8VWS0;Q53HK9;F8VW21;F8VZS0;B4E3D5;F8W1K8;Q3MHV2 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 952.5112 2 948.503674 1894.9928 62029.2 0.94718 0.0008984 -0.0089123 -8.4533E-06 0.93826 0.00088995 949.005141893199 952.510501702253 120.19 0.8244 120.19 119.92 120.74 0 423 60 12 0 0 0 2.2638E-25 3 79271 145.71 130.12 1 1.0446 1.2253 0 332620000 161940000 170670000 37717 345 14193 14580 59224;59225;59226 59224 VLALSVETDYTFPLAEK 17 1 0 Unmodified _VLALSVETDYTFPLAEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;Q6NSF2;F8VWS0;Q53HK9;F8VW21;F8VZS0;B4E3D5;F8W1K8;Q3MHV2 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 953.0138 2 948.503674 1894.9928 64960.25 0.39843 0.00037792 0.46565 0.00044167 0.86408 0.00081959 949.005075055723 952.511695257153 142.78 0.47713 142.78 142.57 143.05 0 122 50 4 0 0 0 0.036583 1 92186 23.236 23.236 1 1.0479 1.161 0 1519900 662770 857090 37718 345 14193 14580 59227 59227 VLALSVETDYTFPLAEK 17 1 0 Unmodified _VLALSVETDYTFPLAEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;Q6NSF2;F8VWS0;Q53HK9;F8VW21;F8VZS0;B4E3D5;F8W1K8;Q3MHV2 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 948.5059 2 948.503674 1894.9928 NaN NaN NaN NaN NaN NaN NaN NaN NaN 143.16 1 143.16 142.66 143.66 1.5259E-05 0 0 0 0.0024348 1 92276 54.7 40.794 1 37719 345 14193 14580 59228 59228 VLALSVETDYTFPLAEK 17 1 0 Unmodified _VLALSVETDYTFPLAEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;Q6NSF2;F8VWS0;Q53HK9;F8VW21;F8VZS0;B4E3D5;F8W1K8;Q3MHV2 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 949.0072 2 948.503674 1894.9928 61463.67 1.0256 0.00097278 -0.41129 -0.00039011 0.6143 0.00058266 949.004120811032 953.011685478111 132.95 1.0439 132.95 132.27 133.32 0 221 48 10 0 0 0 1.0047E-06 2 80845 90.926 81.737 1 0.97054 0.80855 0 47992000 24738000 23254000 37720 345 14193 14580 59229;59230 59230 VLALSVETDYTFPLAEK 17 1 0 Unmodified _VLALSVETDYTFPLAEK_ 0 0 0 Q53HW2;A8K4Z4;A0A024RBS2;P05388;Q6NSF2;F8VWS0;Q53HK9;F8VW21;F8VZS0;B4E3D5;F8W1K8;Q3MHV2 Q53HW2 Q53HW2 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 949.0066 2 948.503674 1894.9928 62087.93 1.0742 0.0010189 -0.43928 -0.00041665 0.6349 0.0006022 949.003352540818 953.011651243036 132.75 0.74774 132.75 132.27 133.02 1.5259E-05 135 32 10 0 0 0 1.4703E-10 2 79768 112.43 103.48 1 0.87818 0.73104 0 39515000 21658000 17857000 37721 345 14193 14580 59231;59232 59232 VLANNSLSFEK 11 1 0 Unmodified _VLANNSLSFEK_ 0 0 0 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07;R4GNC1 V9HWK0 V9HWK0 HEL103;SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 615.3364 2 611.327328 1220.6401 80007.11 0.39724 0.00024284 0.093074 5.6899E-05 0.49032 0.00029974 611.327460985684 615.334443314018 61.67 0.6116 61.67 61.347 61.958 -3.8147E-06 140 49 4 0 0 0 0.032634 1 35157 37.556 18.776 1 1.5611 1.5844 0 10254000 2653100 7600600 37722 1416 14194 14581 59233 59233 VLANPGNSQVAR 12 0 1 Unmodified _VLANPGNSQVAR_ 0 0 0 B2RBR9;Q14974;J3QR48 B2RBR9 B2RBR9 KPNB1 Importin subunit beta-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.34 2 613.336018 1224.65748 NaN NaN NaN 0.14452 8.8638E-05 NaN NaN NaN NaN 28.363 0.25669 28.363 28.213 28.469 1.9073E-06 0 0 0 0.00073047 1 13336 85.807 50.189 1 NaN NaN 0 9745700 0 9745700 37723 880 14195 14582 59234 59234 VLANPGNSQVAR 12 0 1 Unmodified _VLANPGNSQVAR_ 0 0 0 B2RBR9;Q14974;J3QR48 B2RBR9 B2RBR9 KPNB1 Importin subunit beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3405 2 613.336018 1224.65748 77814.19 0.069228 4.246E-05 0.90061 0.00055237 0.96983 0.00059483 613.336753605875 618.340366357713 27.686 0.2594 27.686 27.558 27.818 -1.9073E-06 60 13 6 0 0 0 2.084E-05 2 12974 103.01 80.364 1 0.91699 1.0039 0 32712000 17902000 14810000 37724 880 14195 14582 59235;59236 59236 VLAPILPDNFSTPTGSR 17 0 1 Unmodified _VLAPILPDNFSTPTGSR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.9854 2 892.980701 1783.94685 64236.43 1.0964 0.00097906 -0.053768 -4.8014E-05 1.0426 0.00093104 892.981003833067 897.984792105668 111.51 0.90807 111.51 111.18 112.09 0 471 65 11 0 0 0 5.7021E-09 3 70004 102.62 102.62 1 1.0373 1.2295 0 530410000 258120000 272300000 37725 2059 14196 14583 59237;59238;59239 59237 VLAPILPDNFSTPTGSR 17 0 1 Unmodified _VLAPILPDNFSTPTGSR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.9816 2 892.980701 1783.94685 64362.87 0.56113 0.00050107 0.15645 0.00013971 0.71757 0.00064078 892.981083784989 897.984978211418 110.97 0.91277 110.97 110.61 111.52 7.6294E-06 496 65 10 0 0 0 3.1719E-09 3 71499 107.09 107.09 1 1.0657 1.2305 0 246220000 120070000 126150000 37726 2059 14196 14583 59240;59241;59242 59241 VLAPILPDNFSTPTGSR 17 0 1 Unmodified _VLAPILPDNFSTPTGSR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 893.4818 2 892.980701 1783.94685 64456.12 0.72923 0.00065118 -0.72815 -0.00065022 0.0010746 9.5959E-07 892.98055373729 897.984341249381 122.57 1.9145 122.57 122.23 124.15 0 453 87 12 0 0 0 0.00011314 1 73190 58.674 58.674 1 1.9623 1.7019 0 183860000 62837000 121020000 37727 2059 14196 14583 59243 59243 VLAPILPDNFSTPTGSR 17 0 1 Unmodified _VLAPILPDNFSTPTGSR_ 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 892.9814 2 892.980701 1783.94685 64435.46 0.54164 0.00048367 -0.50654 -0.00045233 0.035101 3.1345E-05 892.9807120469 897.984509416598 122.43 1.2723 122.43 122.04 123.32 -7.6294E-06 407 63 12 0 0 0 7.3525E-18 3 72134 127.17 127.17 1 1.8752 1.638 0 225070000 83406000 141670000 37728 2059 14196 14583 59244;59245;59246 59245 VLAQNSGFDLQETLVK 16 1 0 Unmodified _VLAQNSGFDLQETLVK_ 0 0 0 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;B4DN39 Q59ET3 Q59ET3 CCT6A T-complex protein 1 subunit zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.4814 2 881.472709 1760.93086 66352.77 0.68305 0.00060209 0.44621 0.00039332 1.1293 0.00099541 881.974985838253 885.98133698308 101.57 0.58072 101.57 101.31 101.89 7.6294E-06 153 44 6 0 0 0 4.0359E-12 2 62370 117.23 117.23 1 3.0843 3.211 0 11595000 3625200 7970100 37729 389 14197 14584 59247;59248 59247 VLAQNSGFDLQETLVK 16 1 0 Unmodified _VLAQNSGFDLQETLVK_ 0 0 0 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;B4DN39 Q59ET3 Q59ET3 CCT6A T-complex protein 1 subunit zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 885.9838 2 881.472709 1760.93086 66104.57 0.39873 0.00035147 0.45217 0.00039858 0.8509 0.00075005 881.975284420352 885.480149931268 100.91 0.49763 100.91 100.65 101.15 -7.6294E-06 127 38 5 0 0 0 0.00022597 1 63351 58.674 58.674 1 3.3216 3.324 0 13990000 3394500 10596000 37730 389 14197 14584 59249 59249 VLAQQGEYSEAIPILR 16 0 1 Unmodified _VLAQQGEYSEAIPILR_ 0 0 0 B2R8G6;A0A024R7P2;B7Z6M0;Q14318;A0A0A0MTJ1;U3KQI1 B2R8G6 B2R8G6 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.4967 2 893.988526 1785.9625 64874.66 0.6478 0.00057912 0.85924 0.00076815 1.507 0.0013473 893.990463744563 899.494289458534 105.46 0.58003 105.46 105.12 105.7 0 200 44 6 0 0 0 3.3718E-06 2 65168 89.403 75.741 1 1.1829 1.2181 0 24739000 11756000 12982000 37731 232 14198 14585 59250;59251 59250 VLASLIIR 8 0 1 Unmodified _VLASLIIR_ 0 0 0 Q92878;H7C0V2 Q92878 Q92878 RAD50 DNA repair protein RAD50 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.2824 2 442.80002 883.585488 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.563 1 89.563 89.063 90.063 0 0 0 0 0.046812 1 54070 55.676 24.387 1 37732 1953 14199 14586 59252 59252 VLASLIIR 8 0 1 Unmodified _VLASLIIR_ 0 0 0 Q92878;H7C0V2 Q92878 Q92878 RAD50 DNA repair protein RAD50 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.7998 2 442.80002 883.585488 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.327 1 88.327 87.827 88.827 0 0 0 0 0.012508 1 54483 73.616 9.3404 1 37733 1953 14199 14586 59253 59253 VLATAFDTTLGGR 13 0 1 Unmodified _VLATAFDTTLGGR_ 0 0 0 O14992;A0A087WTS8;A0A087WYC1;Q59GF8;V9HW33;B4DH02;P34932;B4DT47;B4DIZ3;B4DUS3;B4E354;Q7KYN0 O14992 O14992 HS24/p52;HSPA4;HEL-S-5a;HS24/P52 Heat shock 70 kDa protein 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3629 2 661.359159 1320.70376 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.469 1 87.469 86.969 87.969 0 0 0 0 0.0017486 1 52784 69.979 34.755 1 37734 404 14200 14587 59254 59254 VLATQPGPGR 10 0 1 Unmodified _VLATQPGPGR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97;B3KPQ2;A0A087X0G0 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.2852 2 498.285266 994.555979 86034.78 0.40838 0.00020349 -0.15967 -7.9564E-05 0.24871 0.00012393 498.285159685132 503.289227263 24.002 0.42712 24.002 23.789 24.216 0 80 20 6 0 0 0 1.0131E-11 1 9748 138.54 113.62 1 1.3067 1.4629 0 89355000 39945000 49410000 37735 907 14201 14588 59255 59255 VLATQPGPGR 10 0 1 Unmodified _VLATQPGPGR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97;B3KPQ2;A0A087X0G0 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 498.2857 2 498.285266 994.555979 NaN NaN NaN 0.4758 0.00023709 NaN NaN NaN NaN 26.108 0.5025 26.108 25.919 26.421 0 0 0 0 0.045177 1 9813 48.036 28.559 1 NaN NaN 0 2422500 2422500 0 37736 907 14201 14588 59256 59256 VLATTFDPYLGGR 13 0 1 Unmodified _VLATTFDPYLGGR_ 0 0 0 B3KNM0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;E9PDE8;B4DXT2 B3KNM0 B3KNM0 HSPA4L Heat shock 70 kDa protein 4L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3803 2 705.374809 1408.73507 73007.82 0.85605 0.00060384 0.27189 0.00019178 1.1279 0.00079562 705.876529611746 710.378686547723 98.041 0.43486 98.041 97.787 98.222 -7.6294E-06 118 34 5 0 0 0 0.00036872 1 59973 62.303 55.358 1 2.9645 2.999 0 17904000 5434700 12469000 37737 624 14202 14589 59257 59257 VLATVTKPVGGDK 13 2 0 Unmodified _VLATVTKPVGGDK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.8804 2 642.879727 1283.7449 77154.65 1.027 0.00066025 -0.185 -0.00011893 0.84202 0.00054132 643.381228852983 650.893736084367 31.473 0.62253 31.473 31.139 31.762 0 146 57 4 0 0 0 4.1847E-18 2 15415 143.89 77.269 1 0.87538 1.0438 0 20801000 9292700 11509000 37738 342 14203 14590 59258;59259 59259 VLATVTKPVGGDK 13 2 0 Unmodified _VLATVTKPVGGDK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.8947 2 642.879727 1283.7449 76406.27 0.54883 0.00035283 0.16984 0.00010918 0.71866 0.00046201 642.879840728119 650.894028751752 30.592 0.66001 30.592 30.187 30.847 0 149 55 4 0 0 0 0.00022271 2 14809 97.456 50.259 1 0.8728 1.0084 0 31960000 14653000 17307000 37739 342 14203 14590 59260;59261 59260 VLATVTKPVGGDK 13 2 0 Unmodified _VLATVTKPVGGDK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.88 2 642.879727 1283.7449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.318 1 30.318 29.818 30.818 0 0 0 0 1.0549E-05 1 14831 97.456 15.908 1 37740 342 14203 14590 59262 59262 VLATVTKPVGGDK 13 2 0 Unmodified _VLATVTKPVGGDK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 650.8948 2 642.879727 1283.7449 76905.33 0.49939 0.00032105 0.1715 0.00011026 0.67089 0.0004313 642.879733574021 650.893865653832 35.353 0.7613 35.353 35.077 35.839 0 313 66 7 0 0 0 0.0077435 2 15636 57.836 29.823 1 0.82092 0.70099 0 14982000 8112700 6869000 37741 342 14203 14590 59263;59264 59263 VLATVTKPVGGDK 13 2 0 Unmodified _VLATVTKPVGGDK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.8804 2 642.879727 1283.7449 75175.66 0.73251 0.00047092 -0.3445 -0.00022147 0.38802 0.00024945 642.879565265303 650.893681958094 35.239 0.81703 35.239 34.977 35.794 0 285 70 6 0 0 0 0.00076521 2 15143 85.958 38.76 1 0.84837 0.7173 0 12265000 6375000 5889800 37742 342 14203 14590 59265;59266 59266 VLCLAVAVGHVK 12 1 0 Unmodified _VLCLAVAVGHVK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.5849 3 422.584797 1264.73256 89336.51 0.18318 7.7411E-05 0.04181 1.7668E-05 0.225 9.508E-05 422.58495482896 425.256351586126 78.187 0.62872 78.187 77.912 78.541 0 253 49 8 0 0 0 0.0026917 1 46154 36.417 36.417 1 0.80632 0.91054 0 80959000 44728000 36231000 37743 1651 14204 14591 59267 59267 VLCLAVAVGHVK 12 1 0 Unmodified _VLCLAVAVGHVK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 425.2562 3 422.584797 1264.73256 90464.54 -0.12258 -5.1801E-05 0.17506 7.3978E-05 0.052481 2.2178E-05 422.584958622369 425.256319117133 76.761 0.67105 76.761 76.471 77.142 0 265 49 8 0 0 0 0.0031971 2 46309 31.989 31.989 1 0.85449 0.95669 0 110260000 66688000 43568000 37744 1651 14204 14591 59268;59269 59269 VLCLAVAVGHVK 12 1 0 Unmodified _VLCLAVAVGHVK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.3808 2 633.373558 1264.73256 76032.7 0.62432 0.00039543 -0.074264 -4.7037E-05 0.55006 0.00034839 633.373631054375 637.380684463312 89.336 0.67513 89.336 89.074 89.75 0 175 42 6 0 0 0 0.00020355 2 49313 79.906 79.906 1 1.0207 0.81832 0 7468900 3408100 4060800 37745 1651 14204 14591 59270;59271 59270 VLCLAVAVGHVK 12 1 0 Unmodified _VLCLAVAVGHVK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 425.2563 3 422.584797 1264.73256 89774.24 -0.16689 -7.0527E-05 0.1484 6.2711E-05 -0.018495 -7.8156E-06 422.584862639536 425.256310321059 89.335 0.95428 89.335 89.02 89.975 0 364 60 11 0 0 0 0.00074018 2 49372 48.004 48.004 1 1.0711 0.8501 0 18945000 9103700 9841000 37746 1651 14204 14591 59272;59273 59273 VLCLAVAVGHVK 12 1 0 Unmodified _VLCLAVAVGHVK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.3737 2 633.373558 1264.73256 77071.95 0.3716 0.00023536 -0.28791 -0.00018235 0.083693 5.3009E-05 633.373273458656 637.380593284937 89.187 0.78291 89.187 88.734 89.517 0 185 50 6 0 0 0 0.00019793 2 48391 78.334 78.334 1 1.0545 0.86025 0 6012700 3024800 2987800 37747 1651 14204 14591 59274;59275 59275 VLCLAVAVGHVK 12 1 0 Unmodified _VLCLAVAVGHVK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 425.2561 3 422.584797 1264.73256 90628.68 -0.63715 -0.00026925 0.40175 0.00016978 -0.23539 -9.9473E-05 422.584955830546 425.256450181631 89.093 1.0298 89.093 88.734 89.764 0 288 66 7 0 0 0 0.006649 1 48336 25.42 25.42 1 1.0894 0.87463 0 14357000 6474300 7882200 37748 1651 14204 14591 59276 59276 VLCLSQSEGR 10 0 1 Unmodified _VLCLSQSEGR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.7905 2 574.790055 1147.56556 75508.66 0.44564 0.00025615 -0.1034 -5.9431E-05 0.34224 0.00019672 574.790039415216 579.793887327349 45.019 0.94131 45.019 44.664 45.606 -3.8147E-06 310 69 7 0 0 0 0.0096567 2 21432 54.416 21.524 1 1.4983 1.2532 0 10300000 4164700 6135100 37749 1741 14205 14592 59277;59278 59277 VLCLSQSEGR 10 0 1 Unmodified _VLCLSQSEGR_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.7903 2 574.790055 1147.56556 76776.16 0.74207 0.00042653 -0.4473 -0.0002571 0.29477 0.00016943 574.789953165999 579.793732475693 45.154 0.84821 45.154 44.698 45.546 0 266 60 7 0 0 0 0.016025 1 21041 48.423 13.128 1 1.558 1.2744 0 9101800 3635000 5466700 37750 1741 14205 14592 59279 59279 VLDAIIQEK 9 1 0 Unmodified _VLDAIIQEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.8034 2 514.802957 1027.59136 84195.91 0.43329 0.00022306 0.15942 8.2072E-05 0.59271 0.00030513 514.802990297177 518.809987239031 68.159 1.6154 68.159 67.723 69.338 0 654 141 8 0 0 0 0.0011742 3 39400 88.948 68.284 1 0.79987 0.90976 0 166820000 94677000 72139000 37751 2070 14206 14593 59280;59281;59282 59280 VLDAIIQEK 9 1 0 Unmodified _VLDAIIQEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.8033 2 514.802957 1027.59136 84069.16 0.36072 0.0001857 0.18843 9.7003E-05 0.54914 0.0002827 514.803001844123 518.810041513764 67.156 1.3471 67.156 66.588 67.935 0 546 114 8 0 0 0 4.4487E-06 2 39605 133.23 95.423 1 0.85151 0.96897 0 146960000 79070000 67889000 37752 2070 14206 14593 59283;59284 59283 VLDAIIQEK 9 1 0 Unmodified _VLDAIIQEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.8031 2 514.802957 1027.59136 83558.9 0.28759 0.00014805 0.15419 7.9376E-05 0.44178 0.00022743 514.802987852336 518.810043290879 77.795 2.4328 77.795 77.011 79.443 0 666 158 8 0 0 0 0.0010533 4 41472 90.64 69.902 1 1.8062 1.4783 0 35098000 13030000 22068000 37753 2070 14206 14593 59285;59286;59287;59288 59286 VLDAIIQEK 9 1 0 Unmodified _VLDAIIQEK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.8031 2 514.802957 1027.59136 83661.5 0.35773 0.00018416 0.20071 0.00010333 0.55844 0.00028749 514.802971019285 518.810077417976 78.085 2.4173 78.085 77.514 79.931 0 620 154 8 0 0 0 7.7341E-05 3 40952 110.87 73.851 1 1.7166 1.4246 0 36134000 13327000 22807000 37754 2070 14206 14593 59289;59290;59291 59290 VLDELTLAR 9 0 1 Unmodified _VLDELTLAR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__A2A4G1;A8MT21;C9JTG5;CON__Q04695;Q04695;F5GWP8;Q14666;K7EPJ9;B4DE59;K7EMS3;CON__P08779;P08779;B4DWU0;B4E2J5 CON__P02533;CON__Q04695;B4DE59;CON__P08779 CON__P02533 KRT14;KRT15;KRT17;KRT19;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.3007 2 515.300581 1028.58661 NaN NaN NaN -0.10005 -5.1556E-05 NaN NaN NaN NaN 80.461 1.0725 80.461 80.04 81.113 0 0 0 0 0.0072877 1 47647 82.426 42.359 1 NaN NaN 0 128390000 128390000 0 + 37755 1150;1159;1168;964 14207 14594 59292 59292 VLDELTLAR 9 0 1 Unmodified _VLDELTLAR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__A2A4G1;A8MT21;C9JTG5;CON__Q04695;Q04695;F5GWP8;Q14666;K7EPJ9;B4DE59;K7EMS3;CON__P08779;P08779;B4DWU0;B4E2J5 CON__P02533;CON__Q04695;B4DE59;CON__P08779 CON__P02533 KRT14;KRT15;KRT17;KRT19;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.3003 2 515.300581 1028.58661 84360.99 0.56434 0.0002908 0.039104 2.015E-05 0.60344 0.00031095 515.30055949093 520.304404849777 91.603 1.6266 91.603 91.112 92.738 0 372 100 6 0 0 0 0.0032669 1 50746 72.23 33.438 1 0.084952 0.070509 0 20846000 18894000 1951600 + 37756 1150;1159;1168;964 14207 14594 59293 59293 VLDELTLAR 9 0 1 Unmodified _VLDELTLAR_ 0 0 0 CON__P02533;P02533;A0A024R1X6;CON__Q6IFX2;CON__A2A4G1;A8MT21;C9JTG5;CON__Q04695;Q04695;F5GWP8;Q14666;K7EPJ9;B4DE59;K7EMS3;CON__P08779;P08779;B4DWU0;B4E2J5 CON__P02533;CON__Q04695;B4DE59;CON__P08779 CON__P02533 KRT14;KRT15;KRT17;KRT19;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 515.3008 2 515.300581 1028.58661 84529.38 0.27888 0.0001437 0.16317 8.408E-05 0.44204 0.00022778 515.300611793323 520.304570606225 91.44 1.6241 91.44 91.04 92.664 7.6294E-06 368 98 6 0 0 0 0.012314 2 49845 57.59 28.441 1 0.08937 0.074488 0 15850000 14224000 1625800 + 37757 1150;1159;1168;964 14207 14594 59294;59295 59294 VLDELTLTK 9 1 0 Unmodified _VLDELTLTK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.303 2 516.30279 1030.59103 NaN NaN NaN -0.19239 -9.9329E-05 NaN NaN NaN NaN 77.276 1.7337 77.276 76.739 78.472 0 0 0 0 9.8046E-06 2 45897 114.89 64.855 1 NaN NaN 0 217460000 217460000 0 + 37758 1161 14208 14595 59296;59297 59297 VLDELTLTK 9 1 0 Unmodified _VLDELTLTK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.3032 2 516.30279 1030.59103 NaN NaN NaN 0.34227 0.00017672 NaN NaN NaN NaN 76.211 1.872 76.211 75.656 77.528 0 0 0 0 0.0043046 2 46283 76.679 44.069 1 NaN NaN 0 306710000 306710000 0 + 37759 1161 14208 14595 59298;59299 59299 VLDELTLTK 9 1 0 Unmodified _VLDELTLTK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.3032 2 516.30279 1030.59103 NaN NaN NaN -0.29689 -0.00015329 NaN NaN NaN NaN 87.695 3.2708 87.695 87.052 90.323 0 0 0 0 0.00013502 2 48615 96.948 56.85 1 NaN NaN 0 53271000 53271000 0 + 37760 1161 14208 14595 59300;59301 59301 VLDELTLTK 9 1 0 Unmodified _VLDELTLTK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.3031 2 516.30279 1030.59103 NaN NaN NaN -0.11799 -6.0919E-05 NaN NaN NaN NaN 87.798 3.2035 87.798 87.213 90.416 0 0 0 0 0.010577 2 47802 66.27 31.471 1 NaN NaN 0 59711000 59711000 0 + 37761 1161 14208 14595 59302;59303 59302 VLDIIYQPQAIFR 13 0 1 Unmodified _VLDIIYQPQAIFR_ 0 0 0 B4E074;Q9NVX2;A0A0A0MRH0;B4E303;K7ERN7 B4E074 B4E074 NLE1 Notchless protein homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.9503 2 788.448308 1574.88206 69349.6 0.92101 0.00072617 -0.23007 -0.0001814 0.69095 0.00054478 788.447811750365 793.4525082166 121.32 0.46236 121.32 121.09 121.55 0 99 29 4 0 0 0 0.00011502 2 78410 75.682 75.682 1 1.6346 1.7135 0 12320000 4919100 7401100 37762 1060 14209 14596 59304;59305 59305 VLDIIYQPQAIFR 13 0 1 Unmodified _VLDIIYQPQAIFR_ 0 0 0 B4E074;Q9NVX2;A0A0A0MRH0;B4E303;K7ERN7 B4E074 B4E074 NLE1 Notchless protein homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.9554 2 788.448308 1574.88206 68784.8 0.9884 0.0007793 0.076527 6.0337E-05 1.0649 0.00083964 788.448103788779 793.953928767926 120.87 0.44475 120.87 120.66 121.1 -7.6294E-06 111 27 6 0 0 0 0.00014009 2 79829 89.247 89.247 1 1.5086 1.4983 0 16133000 6814200 9319100 37763 1060 14209 14596 59306;59307 59306 VLDIIYQPQAIFR 13 0 1 Unmodified _VLDIIYQPQAIFR_ 0 0 0 B4E074;Q9NVX2;A0A0A0MRH0;B4E303;K7ERN7 B4E074 B4E074 NLE1 Notchless protein homolog 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 788.9509 2 788.448308 1574.88206 69097.86 0.75307 0.00059376 0.38169 0.00030094 1.1348 0.0008947 788.448495838466 793.452729581375 133.66 0.49467 133.66 133.44 133.94 0 104 19 8 0 0 0 0.00012829 2 81395 73.985 73.985 1 1.6017 1.3756 0 6371000 2326500 4044500 37764 1060 14209 14596 59308;59309 59309 VLDIIYQPQAIFR 13 0 1 Unmodified _VLDIIYQPQAIFR_ 0 0 0 B4E074;Q9NVX2;A0A0A0MRH0;B4E303;K7ERN7 B4E074 B4E074 NLE1 Notchless protein homolog 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.9521 2 788.448308 1574.88206 69645.71 1.1962 0.00094312 0.94223 0.0007429 2.1384 0.001686 788.448354639818 793.452359129318 133.47 0.68614 133.47 133.19 133.88 0 115 26 9 0 0 0 5.782E-06 2 80310 105.4 105.4 1 1.6275 1.3503 0 5390300 2004100 3386200 37765 1060 14209 14596 59310;59311 59310 VLDILEDYCMWR 12 0 1 Oxidation (M) _VLDILEDYCM(ox)WR_ VLDILEDYCM(1)WR VLDILEDYCM(74.68)WR 0 1 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.3793 2 814.876001 1627.73745 69313.74 0.79941 0.00065142 -0.40312 -0.00032849 0.39629 0.00032293 814.87566735061 819.880108460898 116.79 0.47396 116.79 116.56 117.03 -7.6294E-06 130 31 7 0 0 0 9.1275E-05 1 74538 74.684 70.807 1 2.7151 2.8472 0 11020000 4225400 6794700 37766 1391 14210 14597 59312 59312 1069 VLDILEDYCMWR 12 0 1 Oxidation (M) _VLDILEDYCM(ox)WR_ VLDILEDYCM(1)WR VLDILEDYCM(76.46)WR 0 1 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.8827 2 814.876001 1627.73745 NaN NaN NaN -0.18076 -0.00014729 NaN NaN NaN NaN 116.32 0.50408 116.32 116.03 116.53 0 0 0 0 0.00049142 1 75902 76.465 66.81 1 NaN NaN 0 6998100 0 6998100 37767 1391 14210 14597 59313 59313 1069 VLDILEDYCMWR 12 0 1 Oxidation (M) _VLDILEDYCM(ox)WR_ VLDILEDYCM(1)WR VLDILEDYCM(63.28)WR 0 1 0 O60264;B7ZAX9;B4DZC0;Q4W5H1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 819.8823 2 814.876001 1627.73745 NaN NaN NaN -0.2178 -0.00017748 NaN NaN NaN NaN 128.38 0.60651 128.38 128.06 128.67 0 0 0 0 0.0015004 1 77481 63.283 45.847 1 NaN NaN 0 1852900 0 1852900 37768 1391 14210 14597 59314 59314 1069 VLDILLEQYPALITGR 16 0 1 Unmodified _VLDILLEQYPALITGR_ 0 0 0 A0A024R169;Q9NXF1;B7Z9D5 A0A024R169 A0A024R169 TEX10 Testis-expressed sequence 10 protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 907.5224 2 907.524744 1813.03494 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.73 1 130.73 130.23 131.23 0 0 0 0 0.0022563 1 87426 55.452 43.239 1 37769 72 14211 14598 59315 59315 VLDLLDPASGDLVIR 15 0 1 Unmodified _VLDLLDPASGDLVIR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.4576 2 798.453788 1594.89302 68213.87 0.86807 0.00069312 -0.12047 -9.6193E-05 0.7476 0.00059692 798.453681320181 803.457794221412 124.38 0.66607 124.38 124.1 124.77 0 253 45 8 0 0 0 3.1433E-06 2 80639 98.156 85.58 1 0.82588 0.87012 0 40045000 21208000 18837000 37770 1745 14212 14599 59316;59317 59316 VLDLLDPASGDLVIR 15 0 1 Unmodified _VLDLLDPASGDLVIR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.9557 2 798.453788 1594.89302 68207.41 0.96946 0.00077407 0.067118 5.359E-05 1.0366 0.00082766 798.453660809502 803.457980859416 124.02 0.63182 124.02 123.74 124.37 -7.6294E-06 240 42 8 0 0 0 1.4771E-05 2 82397 89.403 76.655 1 0.82325 0.90666 0 41086000 24166000 16920000 37771 1745 14212 14599 59318;59319 59319 VLDLLDPASGDLVIR 15 0 1 Unmodified _VLDLLDPASGDLVIR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.4587 2 798.453788 1594.89302 67707.69 0.77083 0.00061547 0.19835 0.00015837 0.96918 0.00077384 798.454351726174 803.458159635684 134.68 0.37366 134.68 134.53 134.9 0 25 8 7 0 0 0 0.00038257 3 82394 58.674 58.674 1 1.545 1.3207 0 38989000 14607000 24383000 37772 1745 14212 14599 59320;59321;59322 59321 VLDLLDPASGDLVIR 15 0 1 Unmodified _VLDLLDPASGDLVIR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 798.4551 2 798.453788 1594.89302 68506.17 0.81485 0.00065062 0.35482 0.00028331 1.1697 0.00093392 798.454318423935 803.458110441934 134.64 0.22928 134.64 134.53 134.76 0 24 5 7 0 0 0 1.1373E-05 2 81442 91.961 76.422 1 1.4219 1.2404 0 46641000 19829000 26812000 37773 1745 14212 14599 59323;59324 59323 VLDLVEVLVTK 11 1 0 Unmodified _VLDLVEVLVTK_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.8898 2 614.381571 1226.74859 78306.57 0.60977 0.00037463 0.096425 5.9242E-05 0.7062 0.00043388 614.381547312067 618.388636028892 124.15 0.83977 124.15 123.83 124.67 7.6294E-06 285 57 8 0 0 0 1.6484E-05 2 80454 106.29 106.29 1 0.89115 0.95774 0 39028000 21477000 17551000 37774 1997 14213 14600 59325;59326 59325 VLDLVEVLVTK 11 1 0 Unmodified _VLDLVEVLVTK_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.3821 2 614.381571 1226.74859 78317.8 0.57501 0.00035328 0.17896 0.00010995 0.75398 0.00046323 614.381599385077 618.388784786929 123.68 0.82932 123.68 123.38 124.21 7.6294E-06 333 57 8 0 0 0 1.0318E-08 2 82013 123.79 123.79 1 0.89078 0.9847 0 44918000 23033000 21885000 37775 1997 14213 14600 59327;59328 59327 VLDLVEVLVTK 11 1 0 Unmodified _VLDLVEVLVTK_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.3822 2 614.381571 1226.74859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.76 1 134.76 134.26 135.26 0 0 0 0 0.014418 1 81545 56.043 33.303 1 37776 1997 14213 14600 59329 59329 VLDNAIETEK 10 1 0 Unmodified _VLDNAIETEK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.8081 2 566.298236 1130.58192 NaN NaN NaN 0.58694 0.00033238 NaN NaN NaN NaN 45.868 0.59747 45.868 45.751 46.349 0 0 0 0 0.023306 1 21967 53.756 37.554 1 NaN NaN 0 1658200 0 1658200 37777 415 14214 14601 59330 59330 VLDPASSDFTR 11 0 1 Unmodified _VLDPASSDFTR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.3014 2 604.30131 1206.58807 79297.41 0.64605 0.00039041 -0.23451 -0.00014172 0.41153 0.00024869 604.300769826977 609.305336147628 59.707 0.69146 59.707 59.504 60.195 -3.8147E-06 233 58 6 0 0 0 7.4243E-05 3 33979 98.249 91.189 1 1.2139 1.357 0 87381000 38313000 49068000 37778 907 14215 14602 59331;59332;59333 59332 VLDPASSDFTR 11 0 1 Unmodified _VLDPASSDFTR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.3019 2 604.30131 1206.58807 80532.5 0.86035 0.00051991 0.11938 7.2139E-05 0.97972 0.00059205 604.300923570671 609.305586458132 58.596 0.62034 58.596 58.393 59.014 0 226 59 7 0 0 0 0.00071156 2 34015 73.067 73.067 1 1.3016 1.4893 0 86774000 40309000 46465000 37779 907 14215 14602 59334;59335 59334 VLDPASSDFTR 11 0 1 Unmodified _VLDPASSDFTR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 604.3021 2 604.30131 1206.58807 77526.01 0.36752 0.00022209 0.089498 5.4083E-05 0.45702 0.00027618 604.301454396003 609.305414162446 69.152 0.5872 69.152 68.88 69.468 0 185 38 8 0 0 0 0.00071156 2 36207 73.067 68.454 1 1.1674 0.95452 0 13725000 6044700 7680100 37780 907 14215 14602 59336;59337 59337 VLDPASSDFTR 11 0 1 Unmodified _VLDPASSDFTR_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.3066 2 604.30131 1206.58807 76867.76 0.48593 0.00029365 -0.15903 -9.6103E-05 0.3269 0.00019755 604.301304501548 609.305324525294 69.705 0.62122 69.705 69.385 70.006 0 205 43 8 0 0 0 0.00022817 3 35708 91.584 80.765 1 1.1161 0.9011 0 10856000 4877000 5978700 37781 907 14215 14602 59338;59339;59340 59338 VLDPTCTIK 9 1 0 Unmodified _VLDPTCTIK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.7886 2 523.781167 1045.54778 NaN NaN NaN 0.2287 0.00011979 NaN NaN NaN NaN 51.982 0.65597 51.982 51.649 52.305 0 0 0 0 0.0067325 1 28770 71.692 42.316 1 NaN NaN 0 25716000 0 25716000 37782 1936 14216 14603 59341 59341 VLDPTCTIK 9 1 0 Unmodified _VLDPTCTIK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.7883 2 523.781167 1045.54778 83657.07 0.61641 0.00032287 0.46764 0.00024494 1.084 0.0005678 523.781672593889 527.788241115817 50.883 0.72196 50.883 50.467 51.189 3.8147E-06 174 60 5 0 0 0 0.0019674 2 28837 78.516 51.554 1 0.87197 0.91956 0 35326000 18737000 16589000 37783 1936 14216 14603 59342;59343 59342 VLDQYIFELSR 11 0 1 Unmodified _VLDQYIFELSR_ 0 0 0 CON__Q3MHN5;CON__ENSEMBL:ENSBTAP00000018229 CON__Q3MHN5 CON__Q3MHN5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.8701 2 691.86936 1381.72417 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.21 1 111.21 110.71 111.71 0 0 0 0 0.00065536 1 69966 73.067 38.346 1 + 37784 1145 14217 14604 59344 59344 VLDQYIFELSR 11 0 1 Unmodified _VLDQYIFELSR_ 0 0 0 CON__Q3MHN5;CON__ENSEMBL:ENSBTAP00000018229 CON__Q3MHN5 CON__Q3MHN5 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.869 2 691.86936 1381.72417 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.73 1 110.73 110.23 111.23 0 0 0 0 0.02352 1 71326 51.927 25.988 1 + 37785 1145 14217 14604 59345 59345 VLDSFCEGLK 10 1 0 Unmodified _VLDSFCEGLK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 584.2919 2 584.289356 1166.56416 NaN NaN NaN 0.7199 0.00042063 NaN NaN NaN NaN 72.913 0.68911 72.913 72.695 73.384 0 0 0 0 0.0014904 1 43651 85.676 65.899 1 NaN NaN 0 31261000 31261000 0 + 37786 1172 14218 14605 59346 59346 VLDSGAPIK 9 1 0 Unmodified _VLDSGAPIK_ 0 0 0 H0YH81;Q0QEN7;V9HW31;P06576;F8W079 H0YH81 H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.2712 2 450.263468 898.512382 90381.36 0.18047 8.1261E-05 0.32463 0.00014617 0.5051 0.00022743 450.262988738864 454.271026936554 38.478 0.38843 38.478 38.303 38.691 0 98 32 5 0 0 0 0.038591 1 19763 42.599 11.309 1 1.3459 1.3705 0 14181000 4338400 9842500 37787 1292 14219 14606 59347 59347 VLDSGAPIK 9 1 0 Unmodified _VLDSGAPIK_ 0 0 0 H0YH81;Q0QEN7;V9HW31;P06576;F8W079 H0YH81 H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 454.2703 2 450.263468 898.512382 87355.16 -0.10193 -4.5894E-05 0.015316 6.8961E-06 -0.086612 -3.8998E-05 450.263138817901 454.270683192565 37.667 0.41926 37.667 37.414 37.833 3.8147E-06 110 32 5 0 0 0 0.012771 1 19572 57.177 20.992 1 1.3698 1.4555 0 20567000 6746300 13821000 37788 1292 14219 14606 59348 59348 VLDSYGDDYR 10 0 1 Unmodified _VLDSYGDDYR_ 0 0 0 A0A024R4Q5;P0C1Z6;A0A0G2JP55;A8MTQ3 A0A024R4Q5 A0A024R4Q5 TFPT TCF3 fusion partner MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.7745 2 601.769842 1201.52513 80236.89 0.82998 0.00049946 0.34175 0.00020565 1.1717 0.00070511 601.770223616398 606.774110068552 42.551 0.43571 42.551 42.345 42.781 0 93 35 4 0 0 0 0.00026133 1 22957 92.062 87.863 1 0.5995 0.59417 0 12112000 7373100 4739400 37789 159 14220 14607 59349 59349 VLDVNLMGTFNVIR 14 0 1 Oxidation (M) _VLDVNLM(ox)GTFNVIR_ VLDVNLM(1)GTFNVIR VLDVNLM(93.35)GTFNVIR 0 1 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 808.9392 2 803.934708 1605.85486 NaN NaN NaN -0.19625 -0.00015777 NaN NaN NaN NaN 115.61 0.58784 115.61 115.32 115.9 7.6294E-06 0 0 0 1.7614E-06 1 73446 93.345 75.481 1 NaN NaN 0 12175000 0 12175000 37790 555 14221 14608 59350 59350 411 VLDVNLMGTFNVIR 14 0 1 Oxidation (M) _VLDVNLM(ox)GTFNVIR_ VLDVNLM(1)GTFNVIR VLDVNLM(131.43)GTFNVIR 0 1 0 A0A0S2Z410;Q99714;Q5H928;A0A0S2Z434 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 808.9411 2 803.934708 1605.85486 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.87 1 114.87 114.37 115.37 0 0 0 0 1.3207E-17 1 74835 131.43 109.86 1 37791 555 14221 14608 59351 59351 411 VLEAAAQAAR 10 0 1 Unmodified _VLEAAAQAAR_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.2822 2 500.282723 998.550893 84510.39 0.42546 0.00021285 -0.4144 -0.00020732 0.01106 5.533E-06 500.28234602962 505.286710492237 28.52 0.3562 28.52 28.344 28.7 1.9073E-06 88 22 5 0 0 0 0.0002277 2 13468 93.162 60.322 1 0.79722 0.81561 0 31917000 18237000 13681000 37792 2056 14222 14609 59352;59353 59353 VLEAAAQAAR 10 0 1 Unmodified _VLEAAAQAAR_ 0 0 0 Q9NPD3;E9PI41 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 505.2862 2 500.282723 998.550893 84930.02 0.090443 4.5247E-05 -0.18922 -9.4665E-05 -0.098781 -4.9418E-05 500.282456197293 505.286718490037 32.08 0.50701 32.08 31.871 32.378 0 105 26 6 0 0 0 0.0091454 2 13658 55.112 22.554 1 1.0065 0.8556 0 5299200 2573600 2725600 37793 2056 14222 14609 59354;59355 59354 VLEALLPLK 9 1 0 Unmodified _VLEALLPLK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.336 2 498.328611 994.642668 86651.84 0.51461 0.00025644 0.046537 2.3191E-05 0.56114 0.00027963 498.328501745907 502.335722740332 109.07 0.71962 109.07 108.7 109.42 -7.6294E-06 159 44 5 0 0 0 0.00050627 1 68056 98.299 85.34 1 1.7163 1.7518 0 14269000 5906000 8363300 37794 587 14223 14610 59356 59356 VLEALLPLK 9 1 0 Unmodified _VLEALLPLK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.3354 2 498.328611 994.642668 NaN NaN NaN 0.15164 7.5567E-05 NaN NaN NaN NaN 108.35 0.77367 108.35 108.06 108.83 0 0 0 0 0.00014296 1 69192 96.253 86.665 1 NaN NaN 0 10252000 0 10252000 37795 587 14223 14610 59357 59357 VLEALLPLK 9 1 0 Unmodified _VLEALLPLK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.3366 2 498.328611 994.642668 NaN NaN NaN 0.023489 1.1705E-05 NaN NaN NaN NaN 120.19 0.48277 120.19 120.01 120.5 0 0 0 0 0.04983 1 71294 47.082 43.229 1 NaN NaN 0 1239700 0 1239700 37796 587 14223 14610 59358 59358 VLECDIIK 8 1 0 Unmodified _VLECDIIK_ 0 0 0 A8K9U0;Q9BWF3;E9PB51;Q9BQ04;E9PLB0;E9PM61;D6R9K7;U3KQD5;J3QRR5 A8K9U0 A8K9U0 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 499.2777 2 495.270435 988.526318 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.817 1 60.817 60.317 61.317 3.8147E-06 0 0 0 0.034622 1 34711 60.682 22.549 1 37797 788 14224 14611 59359 59359 VLECDIIK 8 1 0 Unmodified _VLECDIIK_ 0 0 0 A8K9U0;Q9BWF3;E9PB51;Q9BQ04;E9PLB0;E9PM61;D6R9K7;U3KQD5;J3QRR5 A8K9U0 A8K9U0 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 499.2774 2 495.270435 988.526318 88826.68 0.31884 0.00015791 -0.099488 -4.9273E-05 0.21935 0.00010864 495.27045343845 499.277372710456 59.568 0.32833 59.568 59.446 59.774 0 79 29 4 0 0 0 0.013465 1 34664 65.252 36.829 1 1.1627 1.1922 0 17658000 8433400 9224800 37798 788 14224 14611 59360 59360 VLEEANQAINPK 12 1 0 Unmodified _VLEEANQAINPK_ 0 0 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.3542 2 663.356616 1324.69868 74902.51 0.77148 0.00051176 -0.12796 -8.4884E-05 0.64351 0.00042688 663.356299983354 667.363652841348 44.772 0.68168 44.772 44.446 45.127 0 245 61 6 0 0 0 5.4108E-08 1 24002 113.22 105.84 1 1.7293 1.8599 0 38676000 13106000 25569000 37799 1801 14225 14612 59361 59361 VLEEANQAINPK 12 1 0 Unmodified _VLEEANQAINPK_ 0 0 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 667.3625 2 663.356616 1324.69868 75372.61 1.1728 0.00077796 -0.23941 -0.00015881 0.93336 0.00061915 663.356640866663 667.363430038039 43.955 0.67256 43.955 43.575 44.247 -3.8147E-06 238 56 6 0 0 0 4.2067E-29 2 23871 163.38 155.84 1 1.4032 1.5803 0 58452000 22295000 36157000 37800 1801 14225 14612 59362;59363 59362 VLEEANQAINPK 12 1 0 Unmodified _VLEEANQAINPK_ 0 0 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.3623 2 663.356616 1324.69868 75352.67 0.28889 0.00019163 -0.24934 -0.0001654 0.03955 2.6236E-05 663.356071937806 667.363678343333 51.79 0.67923 51.79 51.429 52.108 -3.8147E-06 238 55 6 0 0 0 0.00059524 1 25474 68.657 61.011 1 0.81537 0.64675 0 4557600 2377100 2180400 37801 1801 14225 14612 59364 59364 VLEEANQAINPK 12 1 0 Unmodified _VLEEANQAINPK_ 0 0 0 Q59F66;Q92841 Q59F66 Q59F66 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.3569 2 663.356616 1324.69868 77567.78 0.38125 0.00025291 0.19961 0.00013241 0.58086 0.00038532 663.356978303505 667.363783074643 52.258 0.68165 52.258 51.982 52.664 0 239 54 6 0 0 0 0.00021273 2 25215 81.338 75.557 1 1.1026 0.85994 0 3470000 1532100 1938000 37802 1801 14225 14612 59365;59366 59366 VLEEVCASPQGPGALFVQSHLEDLK 25 1 0 Unmodified _VLEEVCASPQGPGALFVQSHLEDLK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 908.4619 3 908.461815 2722.36362 63950.17 0.84727 0.00076971 0.6671 0.00060604 1.5144 0.0013758 908.797589754036 911.467714586483 111.8 0.41254 111.8 111.59 112 0 118 30 6 0 0 0 1.2057E-09 1 70478 57.147 50.272 1 1.5836 1.5516 0 21502000 6968600 14533000 37803 907 14226 14613 59367 59367 VLEEVCASPQGPGALFVQSHLEDLK 25 1 0 Unmodified _VLEEVCASPQGPGALFVQSHLEDLK_ 0 0 0 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 908.8004 3 908.461815 2722.36362 NaN NaN NaN 1.0582 0.0009613 NaN NaN NaN NaN 111.27 0.28809 111.27 111.13 111.42 0 0 0 0 4.2412E-06 2 71761 48.867 41.507 1 NaN NaN 0 8594000 8594000 0 37804 907 14226 14613 59368;59369 59368 VLEEVCASPQGPGALFVQSHLEDLKK 26 2 0 Unmodified _VLEEVCASPQGPGALFVQSHLEDLKK_ 0 0 1 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 713.8754 4 713.621921 2850.45858 70217.27 1.1899 0.00084912 0.22705 0.00016202 1.4169 0.0010111 713.873616793043 717.879686003259 113.94 0.43728 113.94 113.66 114.1 0 115 19 9 0 0 0 0.047272 1 66463 8.2867 8.2867 1 1.2798 1.0967 0 8549100 3639000 4910100 37805 907 14227 14614 59370 59370 VLEEVCASPQGPGALFVQSHLEDLKK 26 2 0 Unmodified _VLEEVCASPQGPGALFVQSHLEDLKK_ 0 0 1 B3KMR5;Q5JTH9;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.8798 4 713.621921 2850.45858 71028.67 0.73052 0.00052131 -0.028831 -2.0574E-05 0.70168 0.00050074 713.873526500827 717.879499554499 113.66 0.45733 113.66 113.5 113.95 7.6294E-06 133 22 8 0 0 0 0.014333 3 65376 18.798 18.798 1 1.2872 1.0863 0 7594400 2982300 4612100 37806 907 14227 14614 59371;59372;59373 59372 VLEFLASSFEVSR 13 0 1 Unmodified _VLEFLASSFEVSR_ 0 0 0 Q15269;A0A0B4J2E5;A0A096LPI6 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.3976 2 742.393199 1482.77184 70856.96 0.95333 0.00070775 -0.16049 -0.00011915 0.79285 0.0005886 742.393674479591 747.397394100009 116.97 1.0392 116.97 116.54 117.58 0 314 73 8 0 0 0 1.6448E-05 2 74618 99.522 62.522 1 0.98364 1.0361 0 40016000 19717000 20300000 37807 1756 14228 14615 59374;59375 59374 VLEFLASSFEVSR 13 0 1 Unmodified _VLEFLASSFEVSR_ 0 0 0 Q15269;A0A0B4J2E5;A0A096LPI6 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.3937 2 742.393199 1482.77184 70530.73 0.75338 0.00055931 0.13969 0.0001037 0.89307 0.00066301 742.393752339309 747.397578491922 116.48 1.0433 116.48 115.97 117.02 0 300 65 8 0 0 0 9.9151E-09 2 76059 115.18 77.089 1 0.97714 1.1343 0 58871000 28958000 29913000 37808 1756 14228 14615 59376;59377 59377 VLEFLASSFEVSR 13 0 1 Unmodified _VLEFLASSFEVSR_ 0 0 0 Q15269;A0A0B4J2E5;A0A096LPI6 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.3948 2 742.393199 1482.77184 70163.27 1.2734 0.00094536 0.25706 0.00019084 1.5305 0.0011362 742.393666005863 747.397329811778 128.35 1.2497 128.35 128.09 129.34 0 254 56 8 0 0 0 0.00014979 3 77446 88.441 50.965 1 1.2491 1.0205 0 14074000 6389800 7684300 37809 1756 14228 14615 59378;59379;59380 59379 VLEFLASSFEVSR 13 0 1 Unmodified _VLEFLASSFEVSR_ 0 0 0 Q15269;A0A0B4J2E5;A0A096LPI6 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 747.8985 2 742.393199 1482.77184 69948.98 0.87209 0.00064743 0.29483 0.00021888 1.1669 0.00086631 742.393461939083 747.397422260882 128.18 1.4146 128.18 127.76 129.18 0 254 58 8 0 0 0 0.00012278 4 76361 90.685 53.992 1 1.2268 1.0397 0 18581000 8133200 10447000 37810 1756 14228 14615 59381;59382;59383;59384 59381 VLEGSELELAK 11 1 0 Unmodified _VLEGSELELAK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.33 2 594.329536 1186.64452 NaN NaN NaN -0.74904 -0.00044518 NaN NaN NaN NaN 70.655 0.92511 70.655 70.259 71.184 0 0 0 0 0.00303 1 41168 68.893 27.864 1 NaN NaN 0 22159000 22159000 0 37811 186;1747;718 14229 14616 59385 59385 VLEGSELELAK 11 1 0 Unmodified _VLEGSELELAK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.3297 2 594.329536 1186.64452 NaN NaN NaN -0.747 -0.00044397 NaN NaN NaN NaN 69.473 0.98458 69.473 69.031 70.016 0 0 0 0 0.00036777 2 41433 91.087 51.086 1 NaN NaN 0 20966000 20966000 0 37812 186;1747;718 14229 14616 59386;59387 59387 VLEGSELELAK 11 1 0 Unmodified _VLEGSELELAK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.3297 2 594.329536 1186.64452 NaN NaN NaN -0.1832 -0.00010888 NaN NaN NaN NaN 80.788 0.8867 80.788 80.653 81.54 -7.6294E-06 0 0 0 0.0019655 1 43740 79.148 42.753 1 NaN NaN 0 4427400 4427400 0 37813 186;1747;718 14229 14616 59388 59388 VLEGSELELAK 11 1 0 Unmodified _VLEGSELELAK_ 0 0 0 A0A024R5M9;A0A087WY61;A0A024R5G4;F5H4J1;Q3SYK8;F5H6Y5;G1UI36;F5H2F3;F5H3L6;F5H0Z7;F5H763;Q86XH4;F5GZW1;F5H1L0;A8K394;Q4LE64;Q14980 A0A024R5M9;A8K394;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.3361 2 594.329536 1186.64452 79625.21 0.68612 0.00040778 -0.63466 -0.0003772 0.051462 3.0585E-05 594.329322715237 598.336274644129 81.076 0.86645 81.076 80.867 81.734 0 220 49 6 0 0 0 0.0012566 2 43013 68.893 36.959 1 1.4828 1.2004 0 13364000 5271100 8092500 37814 186;1747;718 14229 14616 59389;59390 59389 VLELDNVK 8 1 0 Unmodified _VLELDNVK_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;C9J9C1 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.2756 2 465.26875 928.522947 91963.45 0.33858 0.00015753 -0.29164 -0.00013569 0.046934 2.1837E-05 465.268522026375 469.275633508526 56.386 0.72214 56.386 56.164 56.886 0 197 65 4 0 0 0 0.013558 1 31793 65.038 21.791 1 1.3865 1.4468 0 16774000 6765200 10009000 37815 723 14230 14617 59391 59391 VLELDNVK 8 1 0 Unmodified _VLELDNVK_ 0 0 0 B4DQY1;B4DDF7;A8K7B7;A8K3H8;P30153;B3KQV6;Q8NB89;B4DE69;C9J9C1 B4DQY1 B4DQY1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 469.2753 2 465.26875 928.522947 91856.48 0.10225 4.7572E-05 0.096596 4.4943E-05 0.19884 9.2515E-05 465.268728372178 469.275836336901 55.367 0.86459 55.367 55.012 55.877 0 164 63 4 0 0 0 0.0059196 1 31646 88.942 35.776 1 1.3366 1.3907 0 19002000 9088900 9913400 37816 723 14230 14617 59392 59392 VLELLMYFTK 10 1 0 Oxidation (M) _VLELLM(ox)YFTK_ VLELLM(1)YFTK VLELLM(46.16)YFTK 0 1 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.8568 2 636.84905 1271.68355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.2 1 124.2 123.7 124.7 -7.6294E-06 0 0 0 0.01949 1 82584 46.158 10.214 1 37817 1843 14231 14618 59393 59393 1696 VLELNASDER 10 0 1 Unmodified _VLELNASDER_ 0 0 0 P35249;C9J8M3;C9JZI1;C9JXZ7;C9JTT7 P35249 P35249 RFC4 Replication factor C subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.2974 2 573.293485 1144.57242 80886.74 0.73928 0.00042382 0.53511 0.00030677 1.2744 0.0007306 573.29358386565 578.297730419902 45.605 0.58276 45.605 45.244 45.826 0 165 50 5 0 0 0 0.00039145 2 24927 87.806 35.09 1 0.84938 0.91163 0 25402000 13893000 11509000 37818 1541 14232 14619 59394;59395 59394 VLELNASDER 10 0 1 Unmodified _VLELNASDER_ 0 0 0 P35249;C9J8M3;C9JZI1;C9JXZ7;C9JTT7 P35249 P35249 RFC4 Replication factor C subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 578.2965 2 573.293485 1144.57242 82064.18 0.43721 0.00025065 1.3785 0.0007903 1.8157 0.0010409 573.796830133819 578.296975117853 53.31 0.61279 53.31 53.061 53.674 0 186 45 6 0 0 0 0.0095663 2 26469 54.539 24.285 1 0.73779 0.6229 0 3007700 1731200 1276500 37819 1541 14232 14619 59396;59397 59397 VLELTAENER 10 0 1 Unmodified _VLELTAENER_ 0 0 0 P17676;Q99557;Q9BSC0 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.3105 2 587.309135 1172.60372 79282.24 0.29141 0.00017115 -0.18217 -0.00010699 0.10924 6.416E-05 587.308974453065 592.31321755849 50.369 0.62001 50.369 49.944 50.564 0 313 59 9 0 0 0 0.00060252 1 27689 84.213 49.458 1 0.89125 0.98575 0 59318000 30165000 29153000 37820 1493 14233 14620 59398 59398 VLELTAENER 10 0 1 Unmodified _VLELTAENER_ 0 0 0 P17676;Q99557;Q9BSC0 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 587.3087 2 587.309135 1172.60372 78495.85 0.50548 0.00029687 -0.11548 -6.7823E-05 0.39 0.00022905 587.308939132949 592.313007017742 58.094 0.99616 58.094 57.729 58.725 0 348 75 6 0 0 0 0.0013651 2 28839 73.985 66.053 1 1.4113 1.1455 0 10103000 4123300 5979600 37821 1493 14233 14620 59399;59400 59400 VLENIELNK 9 1 0 Unmodified _VLENIELNK_ 0 0 0 Q8N7H0;B3KNG0;B0QY90;B4DQF6;B3KPB9;B0QY89;Q9Y262 Q8N7H0 Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.3134 2 536.305864 1070.59717 83816.69 0.6456 0.00034624 0.66968 0.00035915 1.3153 0.00070539 536.305988556795 540.313043286917 59.539 0.57699 59.539 59.356 59.933 0 100 50 4 0 0 0 0.0017345 2 34663 81.548 18.068 1 0.78011 0.783 0 15912000 8470200 7442000 37822 806 14234 14621 59401;59402 59402 VLEPYPSK 8 1 0 Unmodified _VLEPYPSK_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5;Q9H8E3 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 470.7646 2 466.758018 931.501483 91117.52 -0.075549 -3.5263E-05 -0.29401 -0.00013723 -0.36956 -0.00017249 466.757850757552 470.764931269842 42.675 0.51578 42.675 42.423 42.938 0 102 32 4 0 0 0 0.049834 2 19450 43.808 23.6 1 0.93005 0.81968 0 1205600 641920 563680 37823 883 14235 14622 59403;59404 59404 VLEQLEDLDSR 11 0 1 Unmodified _VLEQLEDLDSR_ 0 0 0 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.34 2 658.838256 1315.66196 NaN NaN NaN 0.55742 0.00036725 NaN NaN NaN NaN 80.64 0.69545 80.64 80.341 81.037 0 0 0 0 5.9298E-08 1 49109 110.14 70.987 1 NaN NaN 0 30239000 30239000 0 37824 222 14236 14623 59405 59405 VLEQLTGQTPVFSK 14 1 0 Unmodified _VLEQLTGQTPVFSK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.9343 2 773.927406 1545.84026 69226.52 1.1402 0.00088244 -0.21044 -0.00016286 0.92977 0.00071957 773.927352348991 777.934250577848 90.536 1.6286 90.536 90.14 91.768 -7.6294E-06 861 133 11 0 0 0 1.5434E-46 6 54501 180.24 145.14 1 1.0128 1.2166 0 1124400000 551200000 573160000 37825 1652 14237 14624 59406;59407;59408;59409;59410;59411 59407 VLEQLTGQTPVFSK 14 1 0 Unmodified _VLEQLTGQTPVFSK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.9279 2 773.927406 1545.84026 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.665 1 91.665 91.165 92.165 0 0 0 0 0.0085582 1 55522 52.79 27.999 1 37826 1652 14237 14624 59412 59412 VLEQLTGQTPVFSK 14 1 0 Unmodified _VLEQLTGQTPVFSK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 773.9287 2 773.927406 1545.84026 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.709 1 91.709 91.209 92.209 0 0 0 0 0.0058363 1 55553 55.04 29.654 1 37827 1652 14237 14624 59413 59413 VLEQLTGQTPVFSK 14 1 0 Unmodified _VLEQLTGQTPVFSK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.935 2 773.927406 1545.84026 69221.65 0.73301 0.0005673 -0.23071 -0.00017856 0.5023 0.00038874 773.927412276478 777.934219158804 89.803 1.7821 89.802 89.294 91.076 -7.6294E-06 997 148 11 0 0 0 2.6064E-114 5 55680 240.85 195.25 1 0.95803 1.1321 0 1356500000 707520000 648990000 37828 1652 14237 14624 59414;59415;59416;59417;59418 59416 VLEQLTGQTPVFSK 14 1 0 Unmodified _VLEQLTGQTPVFSK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.4288 2 773.927406 1545.84026 NaN NaN NaN 0.039649 3.0686E-05 NaN NaN NaN NaN 91.085 0.40298 91.085 90.902 91.305 -7.6294E-06 0 0 0 0.00028196 2 56303 81.92 66.29 1 NaN NaN 0 10247000 10247000 0 37829 1652 14237 14624 59419;59420 59419 VLEQLTGQTPVFSK 14 1 0 Unmodified _VLEQLTGQTPVFSK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 778.4366 2 773.927406 1545.84026 NaN NaN NaN -3.6102 -0.002794 NaN NaN NaN NaN 91.194 0.13557 91.194 91.14 91.276 -7.6294E-06 0 0 0 0.0019487 1 56443 67.385 47.726 1 NaN NaN 0 7510500 0 7510500 37830 1652 14237 14624 59421 59421 VLEQLTGQTPVFSK 14 1 0 Unmodified _VLEQLTGQTPVFSK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.9265 2 773.927406 1545.84026 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.826 1 91.826 91.326 92.326 7.6294E-06 0 0 0 0.0027582 1 56871 59.975 16.891 1 37831 1652 14237 14624 59422 59422 VLEQLTGQTPVFSK 14 1 0 Unmodified _VLEQLTGQTPVFSK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.4292 2 773.927406 1545.84026 69594.61 0.7249 0.00056102 -0.10514 -8.1368E-05 0.61977 0.00047965 773.927561124862 777.934380096397 103.37 2.4587 103.37 102.92 105.38 0 806 156 10 0 0 0 2.2623E-06 5 59093 106.01 98.156 1 1.0941 0.95933 0 206450000 95696000 110750000 37832 1652 14237 14624 59423;59424;59425;59426;59427 59426 VLEQLTGQTPVFSK 14 1 0 Unmodified _VLEQLTGQTPVFSK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 773.9285 2 773.927406 1545.84026 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.2 1 105.2 104.7 105.7 -7.6294E-06 0 0 0 0.034901 1 60006 42.475 15.877 1 37833 1652 14237 14624 59428 59428 VLEQLTGQTPVFSK 14 1 0 Unmodified _VLEQLTGQTPVFSK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 777.9349 2 773.927406 1545.84026 69476.28 0.51669 0.00039988 -0.13195 -0.00010212 0.38474 0.00029776 773.92747853295 777.934379892641 103.23 2.4773 103.23 102.77 105.24 0 876 160 9 0 0 0 3.7239E-21 4 58147 144.1 144.1 1 1.0773 0.92508 0 146790000 69666000 77121000 37834 1652 14237 14624 59429;59430;59431;59432 59432 VLEQLTGQTPVFSK 14 1 0 Unmodified _VLEQLTGQTPVFSK_ 0 0 0 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 774.4269 2 773.927406 1545.84026 71143.55 0.7826 0.00060568 -1.9721 -0.0015263 -1.1895 -0.00092062 773.92598917229 777.933072992704 105.73 0.61486 105.73 105.62 106.24 -7.6294E-06 104 35 4 0 0 0 0.044084 1 59641 27.149 20.546 1 0.95827 0.76051 0 2356200 1545800 810410 37835 1652 14237 14624 59433 59433 VLEQPVVVQSVGTDGR 16 0 1 Unmodified _VLEQPVVVQSVGTDGR_ 0 0 0 Q9BZE1;Q6TGK8;A6NHR2;S4R369;H0Y4J2 Q9BZE1 Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.9618 2 841.957226 1681.8999 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.723 1 75.723 75.223 76.223 0 0 0 0 2.8459E-05 1 44565 92.856 70.279 1 37836 2020 14238 14625 59434 59434 VLEQPVVVQSVGTDGR 16 0 1 Unmodified _VLEQPVVVQSVGTDGR_ 0 0 0 Q9BZE1;Q6TGK8;A6NHR2;S4R369;H0Y4J2 Q9BZE1 Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 841.9582 2 841.957226 1681.8999 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.794 1 75.794 75.294 76.294 0 0 0 0 0.0005868 1 44613 76.522 50.008 1 37837 2020 14238 14625 59435 59435 VLEQPVVVQSVGTDGR 16 0 1 Unmodified _VLEQPVVVQSVGTDGR_ 0 0 0 Q9BZE1;Q6TGK8;A6NHR2;S4R369;H0Y4J2 Q9BZE1 Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.962 2 841.957226 1681.8999 67839.47 0.46273 0.0003896 0.13861 0.00011671 0.60134 0.00050631 842.459490643442 846.961178887478 74.892 0.4076 74.892 74.712 75.119 0 108 35 4 0 0 0 0.00015107 2 45077 73.466 73.466 1 1.1333 1.1412 0 10770000 4872700 5897600 37838 2020 14238 14625 59436;59437 59436 VLEQPVVVQSVGTDGR 16 0 1 Unmodified _VLEQPVVVQSVGTDGR_ 0 0 0 Q9BZE1;Q6TGK8;A6NHR2;S4R369;H0Y4J2 Q9BZE1 Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 846.9602 2 841.957226 1681.8999 65610.01 0.53454 0.00045006 0.043482 3.661E-05 0.57803 0.00048667 841.957460092988 847.462561924809 86.617 0.42767 86.617 86.349 86.777 0 77 25 4 0 0 0 0.0077595 1 47477 34.75 34.75 1 1.1075 0.95973 0 1948400 977290 971090 37839 2020 14238 14625 59438 59438 VLETAEDIQER 11 0 1 Unmodified _VLETAEDIQER_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8;A0A0D9SFF6;A0A1B0GTB7 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.8349 2 651.830431 1301.64631 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.326 1 44.326 43.826 44.826 0 0 0 0 0.0092194 1 23790 60.064 30.397 1 37840 523 14239 14626 59439 59439 VLETAEDIQER 11 0 1 Unmodified _VLETAEDIQER_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8;A0A0D9SFF6;A0A1B0GTB7 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.8348 2 651.830431 1301.64631 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.557 1 44.557 44.057 45.057 3.8147E-06 0 0 0 4.4053E-18 1 23949 140.16 117.52 1 37841 523 14239 14626 59440 59440 VLETAEDIQER 11 0 1 Unmodified _VLETAEDIQER_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8;A0A0D9SFF6;A0A1B0GTB7 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.8334 2 651.830431 1301.64631 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.628 1 44.628 44.128 45.128 0 0 0 0 3.9304E-05 1 23990 85.355 66.26 1 37842 523 14239 14626 59441 59441 VLETAEDIQER 11 0 1 Unmodified _VLETAEDIQER_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;B4DGT1;B4DTV8;A0A0D9SFF6;A0A1B0GTB7 A0A0D9SF54 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.8301 2 651.830431 1301.64631 77435.29 1.3667 0.00089088 -0.77142 -0.00050283 0.59532 0.00038805 651.829696719358 657.335742241166 43.704 0.54305 43.704 43.517 44.06 0 106 43 4 0 0 0 0.00065503 1 23818 73.499 67.959 1 1.4811 1.4819 0 17033000 6294000 10739000 37843 523 14239 14626 59442 59442 VLETPQEIHTVSSEAVSLLEEVITPR 26 0 1 Unmodified _VLETPQEIHTVSSEAVSLLEEVITPR_ 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.8486 3 959.513233 2875.51787 60940 0.54814 0.00052595 -0.10215 -9.8014E-05 0.44599 0.00042793 959.847533862935 963.183523930971 133.6 0.39758 133.6 133.3 133.7 0 26 8 9 0 0 0 6.379E-113 2 89833 211.62 211.62 1 0.9145 1.0671 0 514580000 262610000 251970000 37844 2023 14240 14627 59443;59444 59443 VLETVGVFEVPK 12 1 0 Unmodified _VLETVGVFEVPK_ 0 0 0 B4DEM9;Q9Y2S7 B4DEM9 B4DEM9 POLDIP2 Polymerase delta-interacting protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.8847 2 658.876653 1315.73875 NaN NaN NaN 0.43582 0.00028715 NaN NaN NaN NaN 103.27 0.24629 103.27 103.11 103.36 -7.6294E-06 0 0 0 0.0048177 1 63667 63.283 36.168 1 NaN NaN 0 4839600 0 4839600 37845 967 14241 14628 59445 59445 VLEVQPEK 8 1 0 Unmodified _VLEVQPEK_ 0 0 0 Q15397 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.269 2 471.26875 940.522947 89750.49 0.15613 7.3579E-05 0.30715 0.00014475 0.46328 0.00021833 471.268747011199 475.275859113487 32.665 0.39136 32.665 32.501 32.893 -3.8147E-06 136 35 6 0 0 0 0.0023621 2 16201 100.45 76.296 1 0.91309 0.98206 0 40208000 22405000 17803000 37846 1761 14242 14629 59446;59447 59447 VLEVQPEK 8 1 0 Unmodified _VLEVQPEK_ 0 0 0 Q15397 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2701 2 471.26875 940.522947 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.905 1 31.905 31.405 32.405 0 0 0 0 0.003392 1 15858 96.253 59.232 1 37847 1761 14242 14629 59448 59448 VLEVQPEK 8 1 0 Unmodified _VLEVQPEK_ 0 0 0 Q15397 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.2759 2 471.26875 940.522947 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.039 1 32.039 31.539 32.539 0 0 0 0 0.002787 1 15924 98.523 61.502 1 37848 1761 14242 14629 59449 59449 VLEVQPEK 8 1 0 Unmodified _VLEVQPEK_ 0 0 0 Q15397 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2689 2 471.26875 940.522947 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.059 1 32.059 31.559 32.559 3.8147E-06 0 0 0 0.0041961 1 15934 91.9 54.879 1 37849 1761 14242 14629 59450 59450 VLEVQPEK 8 1 0 Unmodified _VLEVQPEK_ 0 0 0 Q15397 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.2758 2 471.26875 940.522947 90138.7 0.10765 5.0731E-05 0.33995 0.00016021 0.4476 0.00021094 471.26892673552 475.275923310372 37.111 0.95236 37.111 36.541 37.494 0 217 80 4 0 0 0 0.026448 1 16468 54.549 45.686 1 0.99323 0.7878 0 3004500 1285500 1719000 37850 1761 14242 14629 59451 59451 VLEVYR 6 0 1 Unmodified _VLEVYR_ 0 0 0 Q13895;H7BY94 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.7266 2 389.726521 777.438489 96663.52 0.58814 0.00022921 -0.31864 -0.00012418 0.2695 0.00010503 389.726326402694 394.730389460016 39.962 0.47654 39.962 39.658 40.134 0 149 40 6 0 0 0 0.036404 1 21225 126.05 7.8645 1 0.98321 1.131 0 75466000 37145000 38322000 37851 1724 14243 14630 59452 59452 VLFASQEIPASPFR 14 0 1 Unmodified _VLFASQEIPASPFR_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 786.4296 2 781.422291 1560.83003 68501.62 0.78042 0.00060984 1.2129 0.00094776 1.9933 0.0015576 781.924232724792 786.427263942436 120.9 0.36227 120.9 120.72 121.08 0 62 15 6 0 0 0 0.026341 1 70979 32.159 32.159 1 1.1825 1.0711 0 2186400 878050 1308300 37852 1402 14244 14631 59453 59453 VLFDPFELDTSVTPGR 16 0 1 Unmodified _VLFDPFELDTSVTPGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.9648 2 896.959434 1791.90432 65030.77 0.98625 0.00088463 0.34098 0.00030585 1.3272 0.0011905 896.959413942154 901.963789037307 126.5 1.0452 126.5 126.06 127.11 0 501 73 11 0 0 0 1.2402E-34 2 82411 162.22 162.22 1 0.79625 0.91581 0 144450000 78694000 65757000 37853 1756 14245 14632 59454;59455 59454 VLFDPFELDTSVTPGR 16 0 1 Unmodified _VLFDPFELDTSVTPGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.9645 2 896.959434 1791.90432 64664.63 0.90516 0.00081189 0.31878 0.00028593 1.2239 0.0010978 896.959484358887 901.963804526781 126.08 0.94802 126.08 125.69 126.64 -7.6294E-06 426 58 11 0 0 0 1.3308E-24 1 84159 141.38 141.38 1 0.75385 0.86999 0 240550000 135130000 105420000 37854 1756 14245 14632 59456 59456 VLFDPFELDTSVTPGR 16 0 1 Unmodified _VLFDPFELDTSVTPGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.96 2 896.959434 1791.90432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.68 1 126.68 126.18 127.18 0 0 0 0 0.005129 1 84519 51.841 33.573 1 37855 1756 14245 14632 59457 59457 VLFDPFELDTSVTPGR 16 0 1 Unmodified _VLFDPFELDTSVTPGR_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.9893 2 896.959434 1791.90432 NaN NaN NaN -0.8117 -0.00072806 NaN NaN NaN NaN 134.77 0.17896 134.77 134.62 134.8 -1.5259E-05 0 0 0 1.9162E-08 2 82369 94.191 73.9 1 NaN NaN 0 55453000 55453000 0 37856 1756 14245 14632 59458;59459 59458 VLFEQAFSFHGK 12 1 0 Unmodified _VLFEQAFSFHGK_ 0 0 0 Q9UKL0;Q9P2K3;E9PQE5;B4DV59 Q9UKL0 Q9UKL0 RCOR1;RCOR3 REST corepressor 1;REST corepressor 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.5779 3 470.578588 1408.71394 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.773 1 89.773 89.273 90.273 -7.6294E-06 0 0 0 0.051635 1 54194 42.095 29.882 1 37857 2106 14246 14633 59460 59460 VLFPATGYLSIVWK 14 1 0 Unmodified _VLFPATGYLSIVWK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.4565 2 797.455602 1592.89665 69676.1 1.1726 0.00093507 0.18907 0.00015078 1.3616 0.0010858 797.456074870799 801.9642548971 133.19 0.30466 133.19 133.02 133.32 0 39 9 7 0 0 0 2.6626E-06 1 87147 104.82 104.82 1 1.4118 1.3998 0 9505200 3677100 5828000 37858 587 14247 14634 59461 59461 VLFPATGYLSIVWK 14 1 0 Unmodified _VLFPATGYLSIVWK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 801.4642 2 797.455602 1592.89665 69116.97 1.0863 0.0008663 0.037872 3.0201E-05 1.1242 0.0008965 797.956866932996 801.462607651322 132.85 0.48134 132.85 132.62 133.11 0 133 26 8 0 0 0 0.00018873 2 88978 70.942 70.942 1 1.457 1.5011 0 11569000 4840900 6728000 37859 587 14247 14634 59462;59463 59462 VLFRPSDTANSSNQDALSSNTSLK 24 1 1 Unmodified _VLFRPSDTANSSNQDALSSNTSLK_ 0 0 1 Q8N4V1 Q8N4V1 Q8N4V1 MMGT1 Membrane magnesium transporter 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.4317 3 851.424418 2551.25142 66957.72 0.46152 0.00039295 -0.70149 -0.00059727 -0.23997 -0.00020432 851.758386783967 857.430493371815 69.677 0.43152 69.677 69.465 69.897 0 146 36 7 0 0 0 4.6108E-06 1 40493 45.546 42.784 1 0.73861 0.83843 0 24077000 14005000 10072000 37860 1909 14248 14635 59464 59464 VLFSAGHDGNVIVWDLAR 18 0 1 Unmodified _VLFSAGHDGNVIVWDLAR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.6854 3 657.014525 1968.02175 75118.6 0.88677 0.00058262 0.31292 0.00020559 1.1997 0.00078821 657.34903510709 660.684877500372 113.23 0.81666 113.23 112.84 113.65 0 348 59 8 0 0 0 6.4315E-17 2 71482 106.16 106.16 1 0.66436 0.70515 0 42176000 23949000 18226000 37861 1942 14249 14636 59465;59466 59466 VLFSAGHDGNVIVWDLAR 18 0 1 Unmodified _VLFSAGHDGNVIVWDLAR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.0153 3 657.014525 1968.02175 75155.04 0.84275 0.0005537 -0.0095934 -6.303E-06 0.83316 0.0005474 657.348878915169 660.684758937434 112.29 0.6797 112.29 112.02 112.7 7.6294E-06 308 50 8 0 0 0 4.5972E-06 1 72505 79.311 75.333 1 0.70617 0.81509 0 55387000 30717000 24670000 37862 1942 14249 14636 59467 59467 VLFSAGHDGNVIVWDLAR 18 0 1 Unmodified _VLFSAGHDGNVIVWDLAR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 985.5198 2 985.018149 1968.02175 62569.7 0.45428 0.00044748 -0.073329 -7.2231E-05 0.38095 0.00037525 985.519733433201 990.021986702342 112.31 0.45819 112.31 112.11 112.57 0 126 34 5 0 0 0 0.00062833 1 72599 42.785 42.785 1 0.66432 0.66714 0 11184000 6063300 5121100 37863 1942 14249 14636 59468 59468 VLFSAGHDGNVIVWDLAR 18 0 1 Unmodified _VLFSAGHDGNVIVWDLAR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.35 3 657.014525 1968.02175 75066.18 0.9726 0.00063902 0.24293 0.00015961 1.2155 0.00079862 657.014676273479 660.685115941189 123.32 0.8875 123.32 123.08 123.97 0 143 37 7 0 0 0 2.6329E-12 1 73720 92.307 92.307 1 1.3045 1.0783 0 19374000 8394000 10980000 37864 1942 14249 14636 59469 59469 VLFSAGHDGNVIVWDLAR 18 0 1 Unmodified _VLFSAGHDGNVIVWDLAR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.3498 3 657.014525 1968.02175 74802.66 0.891 0.0005854 0.16611 0.00010914 1.0571 0.00069453 657.349608491862 660.684861675972 123.11 0.87802 123.11 122.9 123.78 0 121 38 6 0 0 0 7.6794E-18 1 72651 118.24 118.24 1 1.4617 1.2029 0 14088000 6773300 7315100 37865 1942 14249 14636 59470 59470 VLFTCFK 7 1 0 Unmodified _VLFTCFK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.7441 2 457.743857 913.47316 88374.29 0.22583 0.00010337 0.34481 0.00015784 0.57065 0.00026121 457.743936572829 461.750894642219 79.074 1.249 79.074 78.685 79.934 0 446 111 6 0 0 0 0.034211 2 46982 62.714 26.127 1 0.71546 0.82583 0 220080000 125550000 94525000 37866 1471;1679 14250 14637 59471;59472 59471 VLFTCFK 7 1 0 Unmodified _VLFTCFK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.751 2 457.743857 913.47316 87543.63 0.25013 0.00011449 0.55207 0.00025271 0.8022 0.0003672 457.743889216117 461.750848043628 77.955 1.4362 77.955 77.432 78.868 0 526 122 7 0 0 0 0.026865 2 47289 74.439 37.61 1 0.68783 0.79403 0 191410000 112480000 78925000 37867 1471;1679 14250 14637 59473;59474 59474 VLFTCFK 7 1 0 Unmodified _VLFTCFK_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 461.7513 2 457.743857 913.47316 86506.15 0.1873 8.5736E-05 -0.00055769 -2.5528E-07 0.18674 8.5481E-05 457.743753182352 461.75078632933 90.028 1.9271 90.028 89.514 91.441 0 489 125 7 0 0 0 0.027742 2 49693 73.039 37.933 1 1.2845 1.0523 0 35834000 15268000 20565000 37868 1471;1679 14250 14637 59475;59476 59475 VLFTGVVDAR 10 0 1 Unmodified _VLFTGVVDAR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.8085 2 538.808574 1075.60259 84371.36 0.51744 0.0002788 -0.061004 -3.287E-05 0.45644 0.00024593 538.808867381389 543.813500749602 83.4 0.55429 83.4 83.186 83.741 -7.6294E-06 168 46 5 0 0 0 0.0012794 2 49885 74.376 36.649 1 0.69494 0.70488 0 18156000 10505000 7650500 37869 1738 14251 14638 59477;59478 59477 VLFTGVVDAR 10 0 1 Unmodified _VLFTGVVDAR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.8083 2 538.808574 1075.60259 83469.54 0.63833 0.00034394 -0.43607 -0.00023496 0.20226 0.00010898 538.80838896543 543.813205000356 82.332 0.51947 82.332 82.115 82.635 0 181 45 6 0 0 0 0.0032667 1 50388 65.305 32.465 1 0.67323 0.67738 0 19341000 11119000 8222600 37870 1738 14251 14638 59479 59479 VLFTGVVDAR 10 0 1 Unmodified _VLFTGVVDAR_ 0 0 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.814 2 538.808574 1075.60259 81340.46 0.57561 0.00031014 0.1288 6.9396E-05 0.70441 0.00037954 538.80856876116 543.813549024753 94.853 0.71159 94.853 94.419 95.13 -7.6294E-06 117 44 4 0 0 0 0.014195 1 52296 49.16 16.319 1 1.0598 0.95579 0 2226400 1207400 1019000 37871 1738 14251 14638 59480 59480 VLGELWPLFGGR 12 0 1 Unmodified _VLGELWPLFGGR_ 0 0 0 B4DL07;P28288;B4DZ22 B4DL07 B4DL07 ABCD3 ATP-binding cassette sub-family D member 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 677.8842 2 672.377155 1342.73976 76746.35 0.8942 0.00060124 -0.31463 -0.00021155 0.57957 0.00038969 672.376147089858 677.38129457041 127.99 0.51653 127.99 127.71 128.22 0 124 31 6 0 0 0 0.00074526 2 83312 66.435 66.435 1 2.2107 2.2878 0 6003100 2292900 3710300 37872 994 14252 14639 59481;59482 59481 VLGELWPLFGGR 12 0 1 Unmodified _VLGELWPLFGGR_ 0 0 0 B4DL07;P28288;B4DZ22 B4DL07 B4DL07 ABCD3 ATP-binding cassette sub-family D member 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 677.3816 2 672.377155 1342.73976 76086.05 0.80844 0.00054358 -0.48772 -0.00032793 0.32072 0.00021564 672.376160567455 677.381177597832 127.53 0.50578 127.53 127.27 127.77 7.6294E-06 113 29 5 0 0 0 0.00014575 3 85081 93.111 80.897 1 2.0407 2.0416 0 6888400 2525300 4363100 37873 994 14252 14639 59483;59484;59485 59483 VLGENAIAVR 10 0 1 Unmodified _VLGENAIAVR_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.3056 2 521.306198 1040.59784 91764.45 0.79813 0.00041607 -0.9623 -0.00050165 -0.16417 -8.5582E-05 521.305415199087 526.310753707875 58.789 0.29784 58.789 58.614 58.912 0 87 29 4 0 0 0 0.00014885 2 34166 95.741 52.827 1 0.62098 0.62223 0 17219000 11081000 6137700 37874 1843 14253 14640 59486;59487 59487 VLGENAIAVR 10 0 1 Unmodified _VLGENAIAVR_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.3052 2 521.306198 1040.59784 93339.59 0.095578 4.9825E-05 0.50442 0.00026296 0.6 0.00031278 521.305761569139 526.311099220257 69.709 0.36414 69.709 69.555 69.919 0 91 34 4 0 0 0 0.043945 1 36551 37.191 19.806 1 0.72613 0.62967 0 2474700 1575100 899590 37875 1843 14253 14640 59488 59488 VLGIQVDTDGSGR 13 0 1 Unmodified _VLGIQVDTDGSGR_ 0 0 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B3KVF0;B4DVK5 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 663.8491 2 658.843873 1315.67319 75075.09 0.48917 0.00032228 0.29206 0.00019242 0.78123 0.00051471 658.843942248355 663.848253550324 80.388 0.42162 80.388 80.199 80.621 0 102 32 4 0 0 0 0.00027369 2 43455 66.92 62.903 1 0.71389 0.59729 0 3887400 2144400 1743000 37876 745 14254 14641 59489;59490 59490 VLGIQVDTDGSGR 13 0 1 Unmodified _VLGIQVDTDGSGR_ 0 0 0 B1AHB1;Q53FG5;B1AHB0;A8K521;P33992;B4DQ39;B3KVF0;B4DVK5 B1AHB1 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.8483 2 658.843873 1315.67319 74613.08 0.61573 0.00040567 0.034836 2.2951E-05 0.65056 0.00042862 658.844035958344 663.848099349976 80.663 0.44112 80.663 80.456 80.897 0 104 32 4 0 0 0 0.0048366 1 42731 48.004 44.117 1 0.77736 0.68714 0 3789900 1986600 1803300 37877 745 14254 14641 59491 59491 VLGKPEPAAQPVPESLPGEPEILPQAPANAHLK 33 2 0 Unmodified _VLGKPEPAAQPVPESLPGEPEILPQAPANAHLK_ 0 0 1 Q9NY61;A0A087WWS8 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.7159 4 849.464687 3393.82964 NaN NaN NaN -0.31102 -0.0002642 NaN NaN NaN NaN 100.15 1.1395 100.15 99.678 100.82 7.6294E-06 0 0 0 7.7436E-05 1 61254 40.544 33.447 1 NaN NaN 0 52274000 52274000 0 37878 2080 14255 14642 59492 59492 VLGKPEPAAQPVPESLPGEPEILPQAPANAHLK 33 2 0 Unmodified _VLGKPEPAAQPVPESLPGEPEILPQAPANAHLK_ 0 0 1 Q9NY61;A0A087WWS8 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.7164 4 849.464687 3393.82964 NaN NaN NaN -0.093813 -7.9691E-05 NaN NaN NaN NaN 99.002 0.91657 99.002 98.53 99.446 7.6294E-06 0 0 0 0.00046997 2 61777 30.386 25.38 1 NaN NaN 0 77065000 77065000 0 37879 2080 14255 14642 59493;59494 59494 VLGLNEDPLK 10 1 0 Unmodified _VLGLNEDPLK_ 0 0 0 A0A024RBU4;O96006 A0A024RBU4 A0A024RBU4 hCG_1981838;ZBED1 Zinc finger BED domain-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.3136 2 549.313689 1096.61282 NaN NaN NaN -0.22614 -0.00012422 NaN NaN NaN NaN 86.579 0.4476 86.579 86.168 86.616 0 0 0 0 0.008091 1 51973 65.305 26.283 1 NaN NaN 0 7406700 7406700 0 37880 347 14256 14643 59495 59495 VLGLNEDPLK 10 1 0 Unmodified _VLGLNEDPLK_ 0 0 0 A0A024RBU4;O96006 A0A024RBU4 A0A024RBU4 hCG_1981838;ZBED1 Zinc finger BED domain-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.3142 2 549.313689 1096.61282 NaN NaN NaN -0.15372 -8.4439E-05 NaN NaN NaN NaN 85.524 0.62726 85.524 85.19 85.817 0 0 0 0 0.010494 1 52586 62.823 22.821 1 NaN NaN 0 9146700 9146700 0 37881 347 14256 14643 59496 59496 VLGLVLLR 8 0 1 Unmodified _VLGLVLLR_ 0 0 0 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q53HE7;Q9UIS4;Q15182;P63162;P14678;Q6LBS1 J3QLE5 J3QLE5 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.8102 2 441.810388 881.606223 92267.5 0.29365 0.00012974 -0.18289 -8.0804E-05 0.11076 4.8934E-05 441.810321397754 446.814372055437 111 0.68594 111 110.76 111.44 0 134 46 4 0 0 0 0.002056 2 69775 103.29 76.165 1 1.1686 1.2102 0 20443000 8060000 12383000 37882 1041 14257 14644 59497;59498 59498 VLGLVLLR 8 0 1 Unmodified _VLGLVLLR_ 0 0 0 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q53HE7;Q9UIS4;Q15182;P63162;P14678;Q6LBS1 J3QLE5 J3QLE5 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.8143 2 441.810388 881.606223 92782.04 0.18291 8.081E-05 -0.1812 -8.0056E-05 0.001706 7.5374E-07 441.810272816325 446.814327396038 110.32 0.65263 110.32 109.98 110.64 0 129 43 4 0 0 0 0.0024483 2 70822 99.919 86.577 1 1.1242 1.1124 0 12380000 4769900 7610300 37883 1041 14257 14644 59499;59500 59499 VLGPAAYNVPLPK 13 1 0 Unmodified _VLGPAAYNVPLPK_ 0 0 0 B4DS66;C9J406 B4DS66;C9J406 B4DS66 IMMT MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.3943 2 669.892638 1337.77072 75648.17 1.1932 0.00079935 -0.10373 -6.9485E-05 1.0895 0.00072986 669.892479297812 673.899610851871 96.483 0.64233 96.483 96.121 96.763 0 274 54 6 0 0 0 0.00015591 3 58703 85.731 85.731 1 0.7379 0.82727 0 65285000 40733000 24553000 37884 1029;1128 14258 14645 59501;59502;59503 59502 VLGPAAYNVPLPK 13 1 0 Unmodified _VLGPAAYNVPLPK_ 0 0 0 B4DS66;C9J406 B4DS66;C9J406 B4DS66 IMMT MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.3943 2 669.892638 1337.77072 75503.59 1.0649 0.00071337 -0.34991 -0.0002344 0.715 0.00047897 669.892322350381 673.899491203843 95.66 0.61768 95.66 95.373 95.99 0 258 49 6 0 0 0 0.00028368 1 59516 66.435 66.435 1 0.75299 0.81818 0 39386000 21435000 17950000 37885 1029;1128 14258 14645 59504 59504 VLGPAAYNVPLPK 13 1 0 Unmodified _VLGPAAYNVPLPK_ 0 0 0 B4DS66;C9J406 B4DS66;C9J406 B4DS66 IMMT MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.9006 2 669.892638 1337.77072 75662.92 0.68745 0.00046052 -0.20569 -0.00013779 0.48177 0.00032273 669.892111316584 673.899888053464 109.62 0.51907 109.62 109.33 109.85 0 98 24 6 0 0 0 0.012314 1 63100 53.751 53.751 1 2.0795 1.6285 0 3873100 1380000 2493100 37886 1029;1128 14258 14645 59505 59505 VLGPAAYNVPLPK 13 1 0 Unmodified _VLGPAAYNVPLPK_ 0 0 0 B4DS66;C9J406 B4DS66;C9J406 B4DS66 IMMT MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.9008 2 669.892638 1337.77072 76122.35 0.70494 0.00047224 -0.096447 -6.4609E-05 0.6085 0.00040763 669.89233208056 673.899817020716 109.45 0.48466 109.45 109.18 109.67 -7.6294E-06 83 21 6 0 0 0 0.011284 1 62050 52.579 52.579 1 2.1897 1.7109 0 3683600 1454600 2229100 37887 1029;1128 14258 14645 59506 59506 VLGQLHGGPSSCSATGTNR 19 0 1 Unmodified _VLGQLHGGPSSCSATGTNR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.6436 3 633.642762 1897.90646 NaN NaN NaN -0.3552 -0.00022507 NaN NaN NaN NaN 30.825 0.79595 30.825 30.333 31.129 0 0 0 0 1.8885E-81 2 14971 153.95 122.56 1 NaN NaN 0 156020000 156020000 0 + 37888 1163 14259 14646 59507;59508 59507 VLGQLHGGPSSCSATGTNR 19 0 1 Unmodified _VLGQLHGGPSSCSATGTNR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.9775 3 633.642762 1897.90646 NaN NaN NaN -0.62327 -0.00039493 NaN NaN NaN NaN 29.83 0.84184 29.83 29.591 30.433 0 0 0 0 1.1713E-96 1 14382 162.81 131.42 1 NaN NaN 0 198430000 198430000 0 + 37889 1163 14259 14646 59509 59509 VLGQLHGGPSSCSATGTNR 19 0 1 Unmodified _VLGQLHGGPSSCSATGTNR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.9614 2 949.960505 1897.90646 NaN NaN NaN -0.38456 -0.00036532 NaN NaN NaN NaN 29.827 0.40748 29.827 29.63 30.037 0 0 0 0 4.7811E-19 1 14387 118.16 104.26 1 NaN NaN 0 54387000 54387000 0 + 37890 1163 14259 14646 59510 59510 VLGQLHGGPSSCSATGTNR 19 0 1 Unmodified _VLGQLHGGPSSCSATGTNR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.6429 3 633.642762 1897.90646 NaN NaN NaN -0.41121 -0.00026056 NaN NaN NaN NaN 35.285 0.9653 35.285 35.057 36.022 0 0 0 0 5.8387E-10 1 15621 72.421 55.994 1 NaN NaN 0 21957000 21957000 0 + 37891 1163 14259 14646 59511 59511 VLGQLHGGPSSCSATGTNR 19 0 1 Unmodified _VLGQLHGGPSSCSATGTNR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 950.4623 2 949.960505 1897.90646 NaN NaN NaN -0.61914 -0.00058816 NaN NaN NaN NaN 35.279 0.42258 35.279 35.107 35.53 0 0 0 0 0.0030999 1 15681 45.864 37.559 1 NaN NaN 0 5456000 5456000 0 + 37892 1163 14259 14646 59512 59512 VLGQLHGGPSSCSATGTNR 19 0 1 Unmodified _VLGQLHGGPSSCSATGTNR_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.9774 3 633.642762 1897.90646 NaN NaN NaN -0.6614 -0.00041909 NaN NaN NaN NaN 35.281 0.69883 35.281 35.062 35.761 0 0 0 0 2.529E-13 1 15144 73.11 56.682 1 NaN NaN 0 18816000 18816000 0 + 37893 1163 14259 14646 59513 59513 VLGSEGEEEDEALSPAK 17 1 0 Unmodified _VLGSEGEEEDEALSPAK_ 0 0 0 B4E135;M0R0Q7;Q59HG7;P18858;Q76GR4;M0QY71;M0R1G7;F5GZ28;B4DM52 B4E135 B4E135 LIG1 DNA ligase;DNA ligase 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 880.4147 2 880.415253 1758.81595 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.097 1 57.097 56.597 57.597 0 0 0 0 0.0013748 1 32992 56.225 43.269 1 37894 1066 14260 14647 59514 59514 VLGTAFDPFLGGK 13 1 0 Unmodified _VLGTAFDPFLGGK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.3684 2 661.36117 1320.70779 77165.94 0.89826 0.00059407 0.025257 1.6704E-05 0.92352 0.00061078 661.361096114823 665.368151583571 112.86 0.59062 112.86 112.57 113.16 -7.6294E-06 186 42 6 0 0 0 9.4234E-05 2 71232 93.058 85.409 1 2.115 2.1997 0 16904000 6112700 10792000 37895 390 14261 14648 59515;59516 59515 VLGTAFDPFLGGK 13 1 0 Unmodified _VLGTAFDPFLGGK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.3689 2 661.36117 1320.70779 76474.87 0.8597 0.00056857 -0.30016 -0.00019851 0.55954 0.00037006 661.361269222866 665.367940611947 112.24 0.64548 112.24 111.93 112.57 0 225 48 6 0 0 0 7.8467E-14 1 72512 134.59 123.76 1 1.9819 2.148 0 22148000 6870200 15277000 37896 390 14261 14648 59517 59517 VLGTAFDPFLGGK 13 1 0 Unmodified _VLGTAFDPFLGGK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 665.3694 2 661.36117 1320.70779 74737.33 0.82293 0.00054426 -0.019173 -1.268E-05 0.80376 0.00053158 661.360928038278 665.368196625143 123.91 0.67212 123.91 123.67 124.34 7.6294E-06 118 27 7 0 0 0 0.00014719 1 74117 73.067 68.912 1 1.1265 0.88954 0 4107800 2018100 2089700 37897 390 14261 14648 59518 59518 VLGTAFDPFLGGK 13 1 0 Unmodified _VLGTAFDPFLGGK_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4 A0A024RDQ0 A0A024RDQ0 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.3697 2 661.36117 1320.70779 74966.5 0.78163 0.00051694 0.18452 0.00012204 0.96615 0.00063898 661.361075566634 665.368506785963 123.74 0.6208 123.74 123.46 124.08 0 106 23 6 0 0 0 0.003334 1 73056 50.108 45.953 1 1.3417 1.0586 0 3905900 1617000 2288800 37898 390 14261 14648 59519 59519 VLGTEAVQDPTK 12 1 0 Unmodified _VLGTEAVQDPTK_ 0 0 0 B4DLS8;Q53GV6;B2R791;O43395;B4DM28 B4DLS8 B4DLS8 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.3449 2 629.337892 1256.66123 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.531 1 45.531 45.031 46.031 0 0 0 0 0.00048613 1 24513 79.693 47.338 1 37899 848 14262 14649 59520 59520 VLGTEAVQDPTK 12 1 0 Unmodified _VLGTEAVQDPTK_ 0 0 0 B4DLS8;Q53GV6;B2R791;O43395;B4DM28 B4DLS8 B4DLS8 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.345 2 629.337892 1256.66123 77427.22 0.92775 0.00058387 0.18582 0.00011694 1.1136 0.00070081 629.33857658192 633.345373080029 44.697 0.35907 44.697 44.494 44.853 0 125 26 6 0 0 0 0.00024208 1 24353 87.298 87.298 1 1.4433 1.4891 0 18294000 8480200 9813500 37900 848 14262 14649 59521 59521 VLGTEAVQDPTK 12 1 0 Unmodified _VLGTEAVQDPTK_ 0 0 0 B4DLS8;Q53GV6;B2R791;O43395;B4DM28 B4DLS8 B4DLS8 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.3441 2 629.337892 1256.66123 77629.68 0.35835 0.00022552 0.80304 0.00050538 1.1614 0.0007309 629.338860716029 633.345041628992 52.556 0.47623 52.556 52.311 52.788 0 150 36 6 0 0 0 0.015684 1 25943 42.718 42.718 1 1.0083 0.84041 0 1749200 985700 763520 37901 848 14262 14649 59522 59522 VLGTSPEAIDSAENR 15 0 1 Unmodified _VLGTSPEAIDSAENR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.8936 2 779.889009 1557.76346 70368.91 0.67925 0.00052974 0.42186 0.000329 1.1011 0.00085874 779.889564735454 784.893022045556 56.449 0.63412 56.449 56.152 56.786 -3.8147E-06 180 56 5 0 0 0 4.5292E-07 1 31783 103.43 90.474 1 0.95425 0.96804 0 15105000 7452200 7652900 37902 1259 14263 14650 59523 59523 VLGTSPEAIDSAENR 15 0 1 Unmodified _VLGTSPEAIDSAENR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.8951 2 779.889009 1557.76346 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.668 1 56.668 56.168 57.168 3.8147E-06 0 0 0 0.0010253 1 31935 75.695 63.119 1 37903 1259 14263 14650 59524 59524 VLGTSPEAIDSAENR 15 0 1 Unmodified _VLGTSPEAIDSAENR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.8934 2 779.889009 1557.76346 NaN NaN NaN 0.35972 0.00028054 NaN NaN NaN NaN 55.551 0.46841 55.551 55.314 55.783 0 0 0 0 0.00046166 1 31846 72.34 54.904 1 NaN NaN 0 8577300 0 8577300 37904 1259 14263 14650 59525 59525 VLGTSPEAIDSAENR 15 0 1 Unmodified _VLGTSPEAIDSAENR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.8929 2 779.889009 1557.76346 NaN NaN NaN 0.36124 0.00028172 NaN NaN NaN NaN 66.33 0.44719 66.33 66.166 66.613 0 0 0 0 0.052084 1 33575 36.417 26.73 1 NaN NaN 0 1322200 0 1322200 37905 1259 14263 14650 59526 59526 VLGVPIIVQASQAEK 15 1 0 Unmodified _VLGVPIIVQASQAEK_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;H0Y4X3;Q5QP23 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140 RNA-binding protein 39 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 780.4667 2 776.458873 1550.90319 71239.76 0.78062 0.00060612 0.1505 0.00011686 0.93112 0.00072298 776.4588747572 780.466262461235 106.9 0.64569 106.9 106.59 107.24 0 291 48 8 0 0 0 1.7366E-06 1 66401 99.215 99.215 1 1.011 1.0961 0 44688000 22737000 21951000 37906 588 14264 14651 59527 59527 VLGVPIIVQASQAEK 15 1 0 Unmodified _VLGVPIIVQASQAEK_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;H0Y4X3;Q5QP23 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140 RNA-binding protein 39 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 780.4667 2 776.458873 1550.90319 70554.34 0.83544 0.00064869 -0.016308 -1.2663E-05 0.81913 0.00063602 776.458802680896 780.465952954979 106.18 0.67207 106.18 105.89 106.56 7.6294E-06 288 51 8 0 0 0 5.2506E-07 2 67481 101.95 96.112 1 1.0167 1.1425 0 73849000 34040000 39809000 37907 588 14264 14651 59528;59529 59529 VLGVPIIVQASQAEK 15 1 0 Unmodified _VLGVPIIVQASQAEK_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;H0Y4X3;Q5QP23 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140 RNA-binding protein 39 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.4592 2 776.458873 1550.90319 68758.06 0.94073 0.00073044 -0.13578 -0.00010543 0.80496 0.00062501 776.458676656145 780.465919870843 118.41 0.56741 118.41 118.13 118.69 0 142 23 9 0 0 0 0.00042175 2 69833 57.836 57.836 1 0.59567 0.46219 0 14220000 9530500 4689600 37908 588 14264 14651 59530;59531 59530 VLGVPIIVQASQAEK 15 1 0 Unmodified _VLGVPIIVQASQAEK_ 0 0 0 A0A0U1RQH7;B7Z4L7;Q6N037;E1P5S2;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q7Z3L0;H0Y4X3;Q5QP23 A0A0U1RQH7 A0A0U1RQH7 DKFZp686A11192;RNPC2;RBM39;DKFZp781C0423;DKFZp781I1140 RNA-binding protein 39 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 780.4664 2 776.458873 1550.90319 69097.12 0.70647 0.00054854 -0.080178 -6.2255E-05 0.62629 0.00048629 776.458747334033 780.465975265799 118.14 0.59484 118.14 117.89 118.48 0 161 26 9 0 0 0 0.00045994 2 68745 57.019 57.019 1 0.63055 0.50625 0 14373000 8772400 5600600 37909 588 14264 14651 59532;59533 59533 VLHALQEAAPEVVQPTTVQSSTIPSLLR 28 0 1 Unmodified _VLHALQEAAPEVVQPTTVQSSTIPSLLR_ 0 0 0 Q9NUL7 Q9NUL7 Q9NUL7 DDX28 Probable ATP-dependent RNA helicase DDX28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 999.2239 3 995.552022 2983.63424 64616.02 0.41192 0.00041008 0.16624 0.0001655 0.57815 0.00057558 995.886628869538 999.222923219919 124.93 0.22649 124.93 124.81 125.04 0 25 9 5 0 0 0 0.012293 1 74929 20.455 20.455 1 1.7397 1.5087 0 2090300 863500 1226800 37910 2072 14265 14652 59534 59534 VLHALQEAAPEVVQPTTVQSSTIPSLLR 28 0 1 Unmodified _VLHALQEAAPEVVQPTTVQSSTIPSLLR_ 0 0 0 Q9NUL7 Q9NUL7 Q9NUL7 DDX28 Probable ATP-dependent RNA helicase DDX28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 999.2236 3 995.552022 2983.63424 61895.27 0.38202 0.00038032 0.37446 0.0003728 0.75648 0.00075311 995.886969866192 999.22229293969 124.86 0.29286 124.86 124.7 124.99 0 59 14 8 0 0 0 0.049901 1 73984 9.8828 9.8828 1 1.5998 1.4068 0 4142400 1545400 2597000 37911 2072 14265 14652 59535 59535 VLHIPEFYVGSILR 14 0 1 Unmodified _VLHIPEFYVGSILR_ 0 0 0 S4R3W9;A0A0A0MRF4;B4DIG4;A8K5D5;P49406 S4R3W9 S4R3W9 MRPL19 39S ribosomal protein L19, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.6519 3 548.315364 1641.92426 NaN NaN NaN -0.19742 -0.00010825 NaN NaN NaN NaN 120.02 0.55513 120.02 119.72 120.28 -7.6294E-06 0 0 0 0.01844 1 77241 37.013 22.326 1 NaN NaN 0 2827600 0 2827600 37912 465 14266 14653 59536 59536 VLHIPEFYVGSILR 14 0 1 Unmodified _VLHIPEFYVGSILR_ 0 0 0 S4R3W9;A0A0A0MRF4;B4DIG4;A8K5D5;P49406 S4R3W9 S4R3W9 MRPL19 39S ribosomal protein L19, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.6522 3 548.315364 1641.92426 83709.77 0.65782 0.00036069 0.057178 3.1352E-05 0.715 0.00039204 548.649798853852 551.651382080102 119.15 0.58977 119.15 118.84 119.43 0 147 39 6 0 0 0 0.00032755 2 78441 43.813 43.813 1 1.1381 1.1397 0 9121500 4015900 5105600 37913 465 14266 14653 59537;59538 59538 VLHIPEFYVGSILR 14 0 1 Unmodified _VLHIPEFYVGSILR_ 0 0 0 S4R3W9;A0A0A0MRF4;B4DIG4;A8K5D5;P49406 S4R3W9 S4R3W9 MRPL19 39S ribosomal protein L19, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.6517 3 548.315364 1641.92426 81711.23 0.53854 0.00029529 0.2278 0.00012491 0.76634 0.0004202 548.649759181277 551.651447626149 130.84 0.45673 130.84 130.6 131.05 0 80 18 7 0 0 0 0.013029 1 79324 16.738 16.738 1 1.1526 1.0116 0 1738800 729170 1009600 37914 465 14266 14653 59539 59539 VLHIPEFYVGSILR 14 0 1 Unmodified _VLHIPEFYVGSILR_ 0 0 0 S4R3W9;A0A0A0MRF4;B4DIG4;A8K5D5;P49406 S4R3W9 S4R3W9 MRPL19 39S ribosomal protein L19, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.9864 3 548.315364 1641.92426 83531.14 0.92358 0.00050641 -0.064855 -3.5561E-05 0.85873 0.00047085 548.315283607089 551.985642983927 130.51 0.43996 130.51 130.24 130.68 0 49 17 5 0 0 0 0.0025154 1 78214 29.491 29.491 1 1.8059 1.5544 0 1685000 837090 847930 37915 465 14266 14653 59540 59540 VLHNAQEVEK 10 1 0 Unmodified _VLHNAQEVEK_ 0 0 0 P49916;B7Z6I3;K7ERZ5 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8192 2 583.811845 1165.60914 81852.24 1.0938 0.00063858 -0.053603 -3.1294E-05 1.0402 0.00060729 583.811595648336 587.819030400159 17.104 0.36274 17.104 16.985 17.348 0 39 10 7 0 0 0 2.0999E-08 2 4103 139.43 101.16 1 0.56461 0.5947 0 4322600 2784200 1538400 37916 1589 14267 14654 59541;59542 59541 VLHNAQEVEK 10 1 0 Unmodified _VLHNAQEVEK_ 0 0 0 P49916;B7Z6I3;K7ERZ5 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 392.2149 3 389.543655 1165.60914 94662.27 0.7574 0.00029504 -0.57094 -0.00022241 0.18646 7.2634E-05 389.543420342174 392.214819377923 17.086 0.39213 17.086 16.985 17.377 -1.9073E-06 46 11 7 0 0 0 0.0034082 1 4118 52.49 46.054 1 0.67288 0.68689 0 12012000 6829800 5181900 37917 1589 14267 14654 59543 59543 VLIFSQMTK 9 1 0 Oxidation (M) _VLIFSQM(ox)TK_ VLIFSQM(1)TK VLIFSQM(69.42)TK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;B3KRD4;Q12873;B4DLC6;B4DKV1 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.8072 2 541.79936 1081.58417 81914.95 0.45594 0.00024703 -0.18521 -0.00010034 0.27073 0.00014668 541.799221033575 545.806446803032 64.496 0.8033 64.496 64.209 65.013 0 284 71 6 0 0 0 0.002119 1 37009 69.423 43.687 1 1.2599 1.3919 0 56987000 23340000 33647000 37918 515;1701 14268 14655 59544 59544 379 VLIFSQMTK 9 1 0 Oxidation (M) _VLIFSQM(ox)TK_ VLIFSQM(1)TK VLIFSQM(75.04)TK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;B3KRD4;Q12873;B4DLC6;B4DKV1 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 541.7999 2 541.79936 1081.58417 82074.54 0.53612 0.00029047 -0.14008 -7.5895E-05 0.39604 0.00021457 541.79932357279 545.806459600069 63.228 0.76193 63.228 62.893 63.655 0 292 63 8 0 0 0 0.0010824 2 37139 75.043 43.088 1 1.2221 1.3452 0 42805000 20000000 22805000 37919 515;1701 14268 14655 59545;59546 59546 379 VLIFSQMTK 9 1 0 Oxidation (M) _VLIFSQM(ox)TK_ VLIFSQM(1)TK VLIFSQM(42.11)TK 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;K7EMY3;B3KRD4;Q12873;B4DLC6;B4DKV1 F5GWX5;Q12873 F5GWX5 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.8052 2 541.79936 1081.58417 81845.15 0.51619 0.00027967 -0.48202 -0.00026116 0.034163 1.851E-05 541.799096850947 545.806152822542 73.817 0.63003 73.817 73.434 74.064 0 153 43 5 0 0 0 0.019289 1 38179 42.109 24.073 1 1.2115 0.96737 0 2414700 1064200 1350400 37920 515;1701 14268 14655 59547 59547 379 VLIFSQMVR 9 0 1 Unmodified _VLIFSQMVR_ 0 0 0 O14646;H0YJG4;B4DLD8;H3BTW3;B4DR07;Q461N2;B7ZML1;A0A024R7V7;Q9HCK8;Q8TD26;Q3L8U1;Q9P2D1;A0A024RC75;O14647;A0A1B0GTU9;A8K9Y5 O14646;A0A024RC75 O14646 CHD1;CHD8;CHD9;CHD7;CHD6;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 8;Chromodomain-helicase-DNA-binding protein 6;Chromodomain-helicase-DNA-binding protein 9;Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 546.8157 2 546.815344 1091.61614 83414.8 0.62087 0.0003395 0.082113 4.4901E-05 0.70298 0.0003844 547.316976774021 551.819451363763 112.99 0.35712 112.99 112.78 113.14 0 57 17 4 0 0 0 0.051188 1 64801 37.558 19.523 1 1.0065 0.89283 0 1922300 1018800 903550 37921 1366;354 14269 14656 59548 59548 VLIGENEK 8 1 0 Unmodified _VLIGENEK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.2599 2 451.2531 900.491647 100594 -0.17124 -7.7274E-05 -0.13879 -6.2631E-05 -0.31004 -0.0001399 451.253736666527 455.259795295882 29.857 0.31399 29.857 29.677 29.991 0 75 27 4 0 0 0 0.0099928 1 14445 73.26 34.468 1 1.725 1.7334 0 9925400 3670700 6254800 37922 5 14270 14657 59549 59549 VLIGENEK 8 1 0 Unmodified _VLIGENEK_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.2603 2 451.2531 900.491647 91753.01 0.40231 0.00018154 -0.27442 -0.00012383 0.12789 5.7709E-05 451.253436075842 455.259881245093 29.317 0.28267 29.317 29.171 29.454 -1.9073E-06 66 21 5 0 0 0 0.0011347 1 14124 111.82 47.012 1 2.0204 2.1589 0 21064000 6794600 14269000 37923 5 14270 14657 59550 59550 VLIGGDETPEGQR 13 0 1 Unmodified _VLIGGDETPEGQR_ 0 0 0 O60701;Q9NQ81 O60701 O60701 UGDH;GDH UDP-glucose 6-dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 685.8494 2 685.849155 1369.68376 74019.36 0.71373 0.00048951 0.13381 9.1773E-05 0.84754 0.00058129 685.849180478353 690.853357008506 46.726 0.33065 46.726 46.551 46.881 -3.8147E-06 67 30 4 0 0 0 0.0044503 1 25276 48.44 48.44 1 1.8368 1.8341 0 16710000 5666200 11043000 37924 1397 14271 14658 59551 59551 VLIGVGK 7 1 0 Unmodified _VLIGVGK_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 347.2408 2 343.233982 684.453411 NaN NaN NaN -0.74385 -0.00025532 NaN NaN NaN NaN 45.052 0.58978 45.052 44.881 45.471 0 0 0 0 0.037364 2 24256 64.563 40.768 1 NaN NaN 0 14874000 0 14874000 37925 764 14272 14659 59552;59553 59552 VLIGVGK 7 1 0 Unmodified _VLIGVGK_ 0 0 0 A8K6V3;Q15393;B3KQH1;B3KM77 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 347.2409 2 343.233982 684.453411 104171 0.2448 8.4025E-05 -0.3744 -0.00012851 -0.1296 -4.4483E-05 343.233834777602 347.240849476837 44.289 0.71646 44.289 43.987 44.703 0 195 63 4 0 0 0 0.032615 1 24188 65.263 44.278 1 1.3858 1.4632 0 23672000 11689000 11983000 37926 764 14272 14659 59554 59554 VLIIGGGDGGVLR 13 0 1 Unmodified _VLIIGGGDGGVLR_ 0 0 0 P19623;K7ESL0 P19623 P19623 SRM Spermidine synthase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 613.365 2 613.366787 1224.71902 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.984 1 93.984 93.484 94.484 7.6294E-06 0 0 0 0.003057 1 57069 65.347 22.32 1 37927 1500 14273 14660 59555 59555 VLIIGSGGR 9 0 1 Unmodified _VLIIGSGGR_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.2766 2 436.271627 870.528701 NaN NaN NaN 1.7623 0.00076884 NaN NaN NaN NaN 53.372 0.55783 53.372 53.133 53.691 0 0 0 0 0.0017257 1 29756 84.568 11.529 1 NaN NaN 0 78514000 0 78514000 37928 1507 14274 14661 59556 59556 VLIIGSGGR 9 0 1 Unmodified _VLIIGSGGR_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.2715 2 436.271627 870.528701 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.393 1 53.393 52.893 53.893 0 0 0 0 1.1004E-05 1 29855 109.36 40.959 1 37929 1507 14274 14661 59557 59557 VLIIGSGGR 9 0 1 Unmodified _VLIIGSGGR_ 0 0 0 Q3B7A7;Q59HH3;P22102;Q15374;C9JBJ1;C9JTV6;F8WD69;C9JZG2;C9JKQ7 Q3B7A7 Q3B7A7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 441.2755 2 436.271627 870.528701 NaN NaN NaN 0.31969 0.00013947 NaN NaN NaN NaN 52.037 0.64382 52.037 51.753 52.397 0 0 0 0 0.0059748 1 29467 73.248 8.4449 1 NaN NaN 0 75719000 0 75719000 37930 1507 14274 14661 59558 59558 VLIQVGYEPLPPTIGR 16 0 1 Unmodified _VLIQVGYEPLPPTIGR_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 881.512 2 876.506355 1750.99816 66191.53 0.68653 0.00060175 -0.030339 -2.6592E-05 0.6562 0.00057516 877.007985998962 881.510204644415 114.75 0.75632 114.75 114.41 115.17 -7.6294E-06 282 50 8 0 0 0 0.00015107 3 72719 69.721 69.721 1 1.3016 1.3539 0 22042000 8562200 13479000 37931 2152 14275 14662 59559;59560;59561 59561 VLIQVGYEPLPPTIGR 16 0 1 Unmodified _VLIQVGYEPLPPTIGR_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 881.5135 2 876.506355 1750.99816 66014.69 0.68035 0.00059633 0.021232 1.861E-05 0.70158 0.00061494 876.506338853906 881.510217498962 114.19 0.76329 114.19 113.86 114.63 0 308 53 8 0 0 0 0.00015365 3 74124 72.731 71.085 1 1.4359 1.5061 0 22871000 8059000 14812000 37932 2152 14275 14662 59562;59563;59564 59564 VLIQVGYEPLPPTIGR 16 0 1 Unmodified _VLIQVGYEPLPPTIGR_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 881.5118 2 876.506355 1750.99816 64496.81 0.86716 0.00076007 0.54817 0.00048048 1.4153 0.0012406 877.008482505271 881.510994874957 126.02 0.92368 126.02 125.61 126.54 0 181 37 6 0 0 0 0.0045746 3 75589 36.32 30.438 1 1.6777 1.4102 0 4385900 1474200 2911700 37933 2152 14275 14662 59565;59566;59567 59566 VLIQVGYEPLPPTIGR 16 0 1 Unmodified _VLIQVGYEPLPPTIGR_ 0 0 0 Q9Y6C9;Q53G34;E9PIE4 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 877.0079 2 876.506355 1750.99816 64952.8 0.38933 0.00034125 1.0725 0.00094009 1.4619 0.0012813 877.008749580708 881.511408103289 125.79 0.97201 125.79 125.42 126.4 0 188 44 6 0 0 0 0.00035739 3 74653 52.555 52.555 1 1.4445 1.1984 0 5410400 2233100 3177300 37934 2152 14275 14662 59568;59569;59570 59568 VLISDSLDPCCR 12 0 1 Unmodified _VLISDSLDPCCR_ 0 0 0 O43175;V9HW79 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.8381 2 717.839419 1433.66428 72210.19 0.83637 0.00060038 -0.52957 -0.00038015 0.3068 0.00022023 718.340762222172 722.84371197727 79.714 0.69487 79.714 79.499 80.194 0 301 60 8 0 0 0 0.00095797 1 47279 63.283 57.802 1 2.7001 2.8139 0 38400000 11062000 27339000 37935 1382 14276 14663 59571 59571 VLISDSLDPCCR 12 0 1 Unmodified _VLISDSLDPCCR_ 0 0 0 O43175;V9HW79 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.8438 2 717.839419 1433.66428 73001.2 0.82009 0.00058869 -0.23224 -0.00016671 0.58785 0.00042198 718.340396418229 722.843784311525 78.782 0.63992 78.782 78.505 79.145 0 300 55 7 0 0 0 3.4947E-13 2 47704 135.63 122.26 1 2.5668 2.8047 0 36948000 9510200 27438000 37936 1382 14276 14663 59572;59573 59572 VLISTDLTSR 10 0 1 Unmodified _VLISTDLTSR_ 0 0 0 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6 Q8TDR3 Q8TDR3 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.8208 2 552.816596 1103.61864 85840.96 0.2934 0.0001622 -0.31473 -0.00017399 -0.021325 -1.1789E-05 552.816663511318 557.820700349378 72.319 0.73577 72.319 72.06 72.796 0 184 53 5 0 0 0 0.0078188 1 42282 56.916 56.916 1 1.5787 1.6134 0 9997600 3349300 6648200 37937 1901 14277 14664 59574 59574 VLISTDVWAR 10 0 1 Unmodified _VLISTDVWAR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 585.3318 2 580.327131 1158.63971 78546.35 0.52452 0.00030439 0.56421 0.00032743 1.0887 0.00063182 580.327554708694 585.331371842978 92.493 0.78693 92.493 92.117 92.904 0 253 75 5 0 0 0 0.010335 1 56015 53.493 29.725 1 2.02 2.0573 0 30134000 11053000 19081000 37938 261 14278 14665 59575 59575 VLISTDVWAR 10 0 1 Unmodified _VLISTDVWAR_ 0 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.33 2 580.327131 1158.63971 80189.73 0.74396 0.00043174 0.76583 0.00044443 1.5098 0.00087617 580.327567947988 585.331315873688 91.541 0.9201 91.541 91.254 92.174 0 237 80 7 0 0 0 0.0040033 2 56638 62.104 25.977 1 1.8373 2.1021 0 50749000 17791000 32957000 37939 261 14278 14665 59576;59577 59577 VLITTDLLAR 10 0 1 Unmodified _VLITTDLLAR_ 0 0 0 A8K7F6;P60842;B4DNH2;E7EQG2;Q14240;Q9NZE6;Q96B07 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.8453 2 557.845156 1113.67576 80611.39 0.74869 0.00041765 -0.082395 -4.5964E-05 0.66629 0.00037169 557.845114563749 562.849173763019 101.53 1.5743 101.53 101.1 102.67 0 619 125 9 0 0 0 0.00035656 4 62203 88.948 88.948 1 1.7648 2.0865 0 262790000 91473000 171320000 37940 770 14279 14666 59578;59579;59580;59581 59579 VLITTDLLAR 10 0 1 Unmodified _VLITTDLLAR_ 0 0 0 A8K7F6;P60842;B4DNH2;E7EQG2;Q14240;Q9NZE6;Q96B07 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.8492 2 557.845156 1113.67576 80370.91 0.54025 0.00030138 -0.073784 -4.116E-05 0.46647 0.00026022 557.845112206768 562.849175705423 100.88 1.4544 100.88 100.35 101.81 0 622 115 9 0 0 0 0.00030602 4 63662 90.601 90.601 1 1.7816 2.0657 0 307870000 113370000 194500000 37941 770 14279 14666 59582;59583;59584;59585 59584 VLITTDLLAR 10 0 1 Unmodified _VLITTDLLAR_ 0 0 0 A8K7F6;P60842;B4DNH2;E7EQG2;Q14240;Q9NZE6;Q96B07 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.8495 2 557.845156 1113.67576 80270.43 1.024 0.00057123 -0.016923 -9.4403E-06 1.0071 0.00056179 557.845139718317 562.849157556097 113.93 1.1343 113.93 113.6 114.73 -7.6294E-06 263 50 9 0 0 0 0.00015618 2 66378 95.502 82.525 1 1.3076 1.1178 0 38964000 17213000 21750000 37942 770 14279 14666 59586;59587 59587 VLITTDLLAR 10 0 1 Unmodified _VLITTDLLAR_ 0 0 0 A8K7F6;P60842;B4DNH2;E7EQG2;Q14240;Q9NZE6;Q96B07 A8K7F6 A8K7F6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.8494 2 557.845156 1113.67576 81317.49 0.68404 0.00038159 -0.22998 -0.00012829 0.45406 0.0002533 557.844945219929 562.84909387422 113.68 1.1285 113.68 113.35 114.48 0 229 50 8 0 0 0 0.00012052 2 65289 96.668 96.668 1 1.3657 1.188 0 24665000 9767800 14898000 37943 770 14279 14666 59588;59589 59589 VLITTLITAGR 11 0 1 Unmodified _VLITTLITAGR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.3666 2 579.366256 1156.71796 NaN NaN NaN -0.45632 -0.00026438 NaN NaN NaN NaN 106.56 0.50284 106.56 106.31 106.81 0 0 0 0 0.044136 1 66104 46.001 21.847 1 NaN NaN 0 5580600 5580600 0 37944 1102 14280 14667 59590 59590 VLITTLITAGR 11 0 1 Unmodified _VLITTLITAGR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3664 2 579.366256 1156.71796 81266.19 0.79901 0.00046292 -0.037815 -2.1909E-05 0.7612 0.00044101 579.366141517474 584.370306361887 105.93 0.56933 105.93 105.56 106.13 0 166 43 6 0 0 0 0.0030512 1 67242 60.518 60.518 1 1.3363 1.3404 0 17585000 7390100 10195000 37945 1102 14280 14667 59591 59591 VLITTLITAGR 11 0 1 Unmodified _VLITTLITAGR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.3662 2 579.366256 1156.71796 81943.47 0.80063 0.00046386 0.041675 2.4145E-05 0.84231 0.000488 579.366021741991 584.370438318555 118.07 0.41721 118.07 117.84 118.26 0 59 16 5 0 0 0 0.01938 2 69660 44.318 44.318 1 1.0183 0.90191 0 1516000 779460 736500 37946 1102 14280 14667 59592;59593 59593 VLITTLITAGR 11 0 1 Unmodified _VLITTLITAGR_ 0 0 0 B7Z700;Q5JR04;Q9HCE1;B3KQ43 B7Z700 B7Z700 MOV10 Putative helicase MOV-10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.3707 2 579.366256 1156.71796 81607.01 0.38243 0.00022156 0.41668 0.00024141 0.7991 0.00046297 579.366192012699 584.370743497425 117.8 0.38058 117.8 117.64 118.02 -7.6294E-06 58 18 4 0 0 0 0.01938 1 68504 44.318 43.158 1 0.91582 0.78916 0 1145500 545060 600430 37947 1102 14280 14667 59594 59594 VLKQVHPDTGISSK 14 2 0 Unmodified _VLKQVHPDTGISSK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.9617 3 503.619224 1507.83584 84683.98 0.48574 0.00024463 -0.42057 -0.00021181 0.065168 3.282E-05 503.619205491622 508.961608195665 24.207 0.73793 24.207 24.014 24.752 0 121 30 7 0 0 0 9.3379E-15 1 9982 109.84 82.174 1 0.97574 1.1513 0 177790000 90775000 87017000 37948 34;1513 14281 14668 59595 59595 VLKQVHPDTGISSK 14 2 0 Unmodified _VLKQVHPDTGISSK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 754.9256 2 754.925197 1507.83584 71183.76 0.69301 0.00052317 -0.21315 -0.00016091 0.47986 0.00036226 754.925007172519 762.939291083208 24.207 0.3151 24.207 24.104 24.42 0 39 13 4 0 0 0 9.5602E-29 2 10000 152.31 133.64 1 1.0325 1.2191 0 42296000 19654000 22643000 37949 34;1513 14281 14668 59596;59597 59597 VLKQVHPDTGISSK 14 2 0 Unmodified _VLKQVHPDTGISSK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 762.9401 2 754.925197 1507.83584 70665.45 0.31824 0.00024025 0.36305 0.00027407 0.68129 0.00051432 754.925479700274 762.939601992333 23.073 0.24556 23.073 22.91 23.155 0 49 9 7 0 0 0 3.6801E-69 2 8997 207.47 181.85 1 1.0133 1.1732 0 50028000 24004000 26024000 37950 34;1513 14281 14668 59598;59599 59599 VLKQVHPDTGISSK 14 2 0 Unmodified _VLKQVHPDTGISSK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.2959 3 503.619224 1507.83584 85031.59 0.043052 2.1682E-05 0.020395 1.0271E-05 0.063447 3.1953E-05 503.619379621497 508.96198249555 23.073 0.59509 23.073 22.744 23.339 0 132 25 9 0 0 0 0.00044873 2 8946 46.408 26.668 1 1.3002 1.514 0 207030000 100050000 106980000 37951 34;1513 14281 14668 59600;59601 59600 VLKQVHPDTGISSK 14 2 0 Unmodified _VLKQVHPDTGISSK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 377.9662 4 377.966237 1507.83584 95816.3 -0.091329 -3.4519E-05 0.030376 1.1481E-05 -0.060953 -2.3038E-05 377.966248344648 381.973277951567 23.071 0.4043 23.071 22.91 23.314 0 70 16 8 0 0 0 0.00019595 2 8991 51.726 40.143 1 1.1354 1.3126 0 33946000 16640000 17306000 37952 34;1513 14281 14668 59602;59603 59602 VLKQVHPDTGISSK 14 2 0 Unmodified _VLKQVHPDTGISSK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 508.9619 3 503.619224 1507.83584 85559.59 0.1651 8.3149E-05 -0.23605 -0.00011888 -0.070944 -3.5729E-05 503.619411598555 508.961744424152 26.181 0.53308 26.181 25.995 26.528 0 87 22 6 0 0 0 0.035466 1 9826 18.364 6.388 1 0.81736 0.70576 0 4767900 2454500 2313400 37953 34;1513 14281 14668 59604 59604 VLKQVHPDTGISSK 14 2 0 Unmodified _VLKQVHPDTGISSK_ 0 0 1 B2R4S9;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;A8K9J7;A0A024RCL8;B4DR52;P57053;O60814;Q0D2M2;Q16778;P33778;P23527;A0A024RCJ2;P06899;Q8N257 B2R4S9;Q16778 B2R4S9 HIST1H2BI;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 503.9535 3 503.619224 1507.83584 85563.01 0.30044 0.00015131 0.95688 0.0004819 1.2573 0.00063321 503.619021886947 509.298191527107 25.819 0.52072 25.819 25.581 26.102 0 80 20 6 0 0 0 0.020439 1 9062 25.365 4.4121 1 0.97586 0.83025 0 5536300 3170400 2365900 37954 34;1513 14281 14668 59605 59605 VLLALHDR 8 0 1 Unmodified _VLLALHDR_ 0 0 0 A8K6T5;Q9UBL3;F5H8F7;B4DPT1 A8K6T5 A8K6T5 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 316.1951 3 312.859027 935.55525 108532.4 1.0064 0.00031485 -0.41905 -0.0001311 0.58732 0.00018375 312.858826902796 316.194966761868 43.943 0.5201 43.943 43.62 44.14 0 128 43 4 0 0 0 0.0094076 2 23920 47.198 31.643 1 0.73745 0.73859 0 18713000 7183300 11529000 37955 763 14282 14669 59606;59607 59606 VLLATLSIPITPER 14 0 1 Unmodified _VLLATLSIPITPER_ 0 0 0 Q05BS0;Q6P1R0;Q3B770;Q7Z5T5;Q24JU4;J9R021;Q14152 Q05BS0 Q05BS0 EIF3A;eIF3a Eukaryotic translation initiation factor 3 subunit A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.9683 2 761.963791 1521.91303 NaN NaN NaN -0.86568 -0.00065962 NaN NaN NaN NaN 121.22 0.34435 121.22 121.11 121.45 7.6294E-06 0 0 0 3.3493E-05 1 78368 91.937 68.618 1 NaN NaN 0 4676400 0 4676400 37956 1340 14283 14670 59608 59608 VLLATLSIPITPER 14 0 1 Unmodified _VLLATLSIPITPER_ 0 0 0 Q05BS0;Q6P1R0;Q3B770;Q7Z5T5;Q24JU4;J9R021;Q14152 Q05BS0 Q05BS0 EIF3A;eIF3a Eukaryotic translation initiation factor 3 subunit A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.4713 2 761.963791 1521.91303 NaN NaN NaN -0.47592 -0.00036263 NaN NaN NaN NaN 120.74 0.40689 120.74 120.62 121.03 0 0 0 0 0.0011146 1 79811 73.781 57.11 1 NaN NaN 0 4899900 0 4899900 37957 1340 14283 14670 59609 59609 VLLCDPEAK 9 1 0 Unmodified _VLLCDPEAK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.7808 2 522.773342 1043.53213 NaN NaN NaN -0.37979 -0.00019854 NaN NaN NaN NaN 49.372 0.47113 49.372 49.158 49.629 0 0 0 0 0.018019 1 27050 60.436 42.401 1 NaN NaN 0 34253000 0 34253000 37958 1741 14284 14671 59610 59610 VLLCDPEAK 9 1 0 Unmodified _VLLCDPEAK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.7805 2 522.773342 1043.53213 NaN NaN NaN 0.32648 0.00017068 NaN NaN NaN NaN 48.146 0.50183 48.146 47.871 48.373 0 0 0 0 0.017824 1 26945 60.589 38.458 1 NaN NaN 0 56896000 0 56896000 37959 1741 14284 14671 59611 59611 VLLCDPEAK 9 1 0 Unmodified _VLLCDPEAK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 522.7738 2 522.773342 1043.53213 83203.48 0.31548 0.00016493 0.001023 5.3481E-07 0.31651 0.00016546 522.773459347391 526.780160352166 56.419 0.66006 56.419 56.12 56.78 0 187 41 7 0 0 0 0.042881 1 28480 40.882 22.846 1 1.2616 1.0126 0 7659500 3221600 4437900 37960 1741 14284 14671 59612 59612 VLLCDPEAK 9 1 0 Unmodified _VLLCDPEAK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.7737 2 522.773342 1043.53213 82011.26 0.42212 0.00022068 -0.04317 -2.2568E-05 0.37895 0.00019811 522.773338867825 526.780139256646 56.8 0.68626 56.8 56.543 57.229 0 218 48 6 0 0 0 0.017976 2 28005 52.482 31.182 1 1.3352 1.0896 0 6268200 2478200 3790000 37961 1741 14284 14671 59613;59614 59613 VLLDAPCSGTGVISK 15 1 0 Unmodified _VLLDAPCSGTGVISK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.9066 2 758.905616 1515.79668 68303.95 0.67197 0.00050996 0.050107 3.8026E-05 0.72208 0.00054799 758.906217630743 762.912470945559 79.812 0.75806 79.812 79.499 80.257 0 368 65 7 0 0 0 1.7273E-30 2 47331 155.48 104.41 1 0.84025 0.95216 0 92058000 46002000 46056000 37962 1570 14285 14672 59615;59616 59616 VLLDAPCSGTGVISK 15 1 0 Unmodified _VLLDAPCSGTGVISK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.9064 2 758.905616 1515.79668 68037.46 0.79372 0.00060236 -0.13674 -0.00010377 0.65698 0.00049859 758.906093737342 762.91237534617 78.814 0.75846 78.814 78.527 79.285 7.6294E-06 383 65 8 0 0 0 1.1682E-07 2 47756 110.31 84.367 1 0.83826 0.9529 0 144470000 72800000 71669000 37963 1570 14285 14672 59617;59618 59618 VLLDAPCSGTGVISK 15 1 0 Unmodified _VLLDAPCSGTGVISK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 758.9058 2 758.905616 1515.79668 69127.59 0.83022 0.00063006 -0.17566 -0.00013331 0.65456 0.00049675 758.905721935831 762.912558468459 91.182 1.0127 91.182 90.85 91.863 0 381 69 8 0 0 0 0.00022237 2 50756 75.088 49.149 1 1.067 0.87598 0 37711000 18117000 19594000 37964 1570 14285 14672 59619;59620 59620 VLLDAPCSGTGVISK 15 1 0 Unmodified _VLLDAPCSGTGVISK_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 762.9142 2 758.905616 1515.79668 68371.02 0.59109 0.00044859 -0.16804 -0.00012752 0.42306 0.00032106 758.905751022947 762.912449990881 91.065 0.94405 91.065 90.745 91.689 0 339 62 7 0 0 0 0.00032534 1 49611 59.898 33.96 1 1.0389 0.85728 0 30638000 15570000 15068000 37965 1570 14285 14672 59621 59621 VLLDIFTGVR 10 0 1 Unmodified _VLLDIFTGVR_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.8406 2 566.839874 1131.66519 80727.83 0.91803 0.00052037 -0.33744 -0.00019128 0.58058 0.0003291 566.839595763354 571.843797816353 118.21 0.62358 118.21 117.93 118.55 7.6294E-06 189 37 7 0 0 0 0.00041053 2 75667 87.308 69.922 1 0.59707 0.60783 0 18521000 11617000 6904100 37966 1589 14286 14673 59622;59623 59622 VLLDIFTGVR 10 0 1 Unmodified _VLLDIFTGVR_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 566.84 2 566.839874 1131.66519 80161.24 1.0105 0.00057278 -0.39279 -0.00022265 0.61769 0.00035013 566.839553481544 571.843850158327 117.67 0.64732 117.67 117.36 118.01 0 196 42 6 0 0 0 0.0011505 2 77053 75.378 56.596 1 0.56469 0.58406 0 21694000 13481000 8212200 37967 1589 14286 14673 59624;59625 59624 VLLDIFTGVR 10 0 1 Unmodified _VLLDIFTGVR_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.8447 2 566.839874 1131.66519 82965.7 0.65672 0.00037225 -0.31369 -0.00017781 0.34303 0.00019444 566.839677968774 571.843803262892 129.94 0.55994 129.94 129.69 130.25 0 119 25 6 0 0 0 0.018065 2 78608 47.603 30.827 1 0.65362 0.56703 0 2446000 1450400 995630 37968 1589 14286 14673 59626;59627 59627 VLLDIFTGVR 10 0 1 Unmodified _VLLDIFTGVR_ 0 0 0 P49916;B7Z6I3 P49916 P49916 LIG3 DNA ligase 3;DNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.3463 2 566.839874 1131.66519 82126.03 0.91701 0.0005198 0.10121 5.7369E-05 1.0182 0.00057717 566.839872096625 571.844172312832 129.71 0.58931 129.71 129.46 130.05 0 79 21 6 0 0 0 0.0323 3 77593 41.876 23.841 1 0.59332 0.53579 0 2100800 1262100 838780 37969 1589 14286 14673 59628;59629;59630 59629 VLLDLSAFLK 10 1 0 Unmodified _VLLDLSAFLK_ 0 0 0 Q0VAB1;A0A024R0M6;Q3ZCQ8;M0R0C3;M0R2F8;M0R003 Q0VAB1 Q0VAB1 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.8521 2 559.844625 1117.6747 81657.55 0.93227 0.00052193 -0.12233 -6.8484E-05 0.80995 0.00045344 559.844394789807 563.851522991252 130.69 0.48972 130.69 130.43 130.92 0 125 30 6 0 0 0 0.0010982 2 85183 76.221 48.047 1 1.5906 1.5875 0 9711600 3675700 6035900 37970 53 14287 14674 59631;59632 59631 VLLDLSAFLK 10 1 0 Unmodified _VLLDLSAFLK_ 0 0 0 Q0VAB1;A0A024R0M6;Q3ZCQ8;M0R0C3;M0R2F8;M0R003 Q0VAB1 Q0VAB1 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.8519 2 559.844625 1117.6747 81529.03 0.82843 0.00046379 -0.35132 -0.00019668 0.47711 0.00026711 559.84424315073 563.851342343126 130.25 0.52931 130.25 130.05 130.58 0 158 34 8 0 0 0 0.00051211 2 87012 85.67 61.515 1 1.6658 1.7325 0 18975000 6669700 12305000 37971 53 14287 14674 59633;59634 59634 VLLDNVENK 9 1 0 Unmodified _VLLDNVENK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5;F5H2X1;B7Z842 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.2899 2 522.290214 1042.56587 84573.45 0.59154 0.00030896 -0.070522 -3.6833E-05 0.52102 0.00027213 522.290113143757 526.297055101419 46.747 0.48564 46.747 46.494 46.979 0 186 41 6 0 0 0 0.00092483 2 25869 92.439 39.273 1 0.72298 0.73906 0 31581000 19462000 12118000 37972 1954 14288 14675 59635;59636 59636 VLLESEQFLTELTR 14 0 1 Unmodified _VLLESEQFLTELTR_ 0 0 0 P37108;H0YLA2 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 844.4611 2 839.456527 1676.8985 67063.72 0.99856 0.00083825 -0.18338 -0.00015394 0.81518 0.00068431 839.456306200814 844.460387989644 121.44 0.62669 121.44 121.25 121.88 0 229 40 8 0 0 0 1.9703E-29 2 78421 151.1 151.1 1 0.88187 0.94056 0 44044000 24348000 19696000 37973 1549 14289 14676 59637;59638 59638 VLLESEQFLTELTR 14 0 1 Unmodified _VLLESEQFLTELTR_ 0 0 0 P37108;H0YLA2 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 839.9583 2 839.456527 1676.8985 67675.11 0.82886 0.0006958 0.079255 6.6531E-05 0.90812 0.00076233 839.456517382703 844.460469151971 121.04 0.74066 121.04 120.77 121.51 -7.6294E-06 217 47 9 0 0 0 6.5956E-05 2 79952 90.653 65.216 1 0.9368 1.0662 0 49280000 24285000 24995000 37974 1549 14289 14676 59639;59640 59639 VLLESEQFLTELTR 14 0 1 Unmodified _VLLESEQFLTELTR_ 0 0 0 P37108;H0YLA2 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 839.4603 2 839.456527 1676.8985 NaN NaN NaN 0.7189 0.00060349 NaN NaN NaN NaN 133.93 0.50818 133.93 133.71 134.22 0 0 0 0 0.0022679 1 80681 66.267 34.258 1 NaN NaN 0 8147800 8147800 0 37975 1549 14289 14676 59641 59641 VLLFSLPHPEALLAQQPPDAVK 22 1 0 Unmodified _VLLFSLPHPEALLAQQPPDAVK_ 0 0 0 Q8WUA4;Q53QN0;A0A087WZD8 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.1235 3 795.117649 2382.33112 70029.32 0.87328 0.00069436 -0.18058 -0.00014358 0.6927 0.00055078 795.786224970117 798.123181054021 122.97 0.53722 122.97 122.76 123.3 -7.6294E-06 170 41 6 0 0 0 1.4862E-07 2 79683 55.127 55.127 1 0.87861 0.89601 0 10416000 4626600 5789500 37976 1938 14290 14677 59642;59643 59642 VLLFSLPHPEALLAQQPPDAVK 22 1 0 Unmodified _VLLFSLPHPEALLAQQPPDAVK_ 0 0 0 Q8WUA4;Q53QN0;A0A087WZD8 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.459 3 795.117649 2382.33112 69615.1 0.91959 0.00073118 -0.64214 -0.00051058 0.27744 0.0002206 795.450647119284 798.123200091264 122.41 0.74287 122.41 122.15 122.9 -7.6294E-06 308 58 9 0 0 0 1.0762E-07 3 81135 57.496 57.496 1 0.49628 0.53758 0 22446000 12873000 9573000 37977 1938 14290 14677 59644;59645;59646 59645 VLLFSLPHPEALLAQQPPDAVK 22 1 0 Unmodified _VLLFSLPHPEALLAQQPPDAVK_ 0 0 0 Q8WUA4;Q53QN0;A0A087WZD8 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.4528 3 795.117649 2382.33112 NaN NaN NaN 0.92008 0.00073157 NaN NaN NaN NaN 134.35 0.12363 134.35 134.28 134.41 0 0 0 0 0.01478 1 82023 28.202 9.1665 1 NaN NaN 0 2202900 2202900 0 37978 1938 14290 14677 59647 59647 VLLGETGK 8 1 0 Unmodified _VLLGETGK_ 0 0 0 P62280;M0QZC5;M0R1H6 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 412.7511 2 408.744911 815.475269 95102.65 0.29953 0.00012243 -0.7415 -0.00030308 -0.44197 -0.00018065 408.744347359141 412.751729406972 32.549 1.0141 32.549 32.265 33.279 0 446 93 7 0 0 0 0.011107 2 16098 70.69 36.952 1 0.91097 1.064 0 277420000 146190000 131230000 37979 1641 14291 14678 59648;59649 59648 VLLGETGK 8 1 0 Unmodified _VLLGETGK_ 0 0 0 P62280;M0QZC5;M0R1H6 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 412.7512 2 408.744911 815.475269 94413.47 -0.20553 -8.4009E-05 -0.47514 -0.00019421 -0.68067 -0.00027822 408.74444043794 412.751828013506 36.856 2.0431 36.856 36.593 38.636 0 673 163 8 0 0 0 0.051451 1 16452 43.218 19.246 1 1.1642 0.96532 0 45188000 21706000 23482000 37980 1641 14291 14678 59650 59650 VLLGETGK 8 1 0 Unmodified _VLLGETGK_ 0 0 0 P62280;M0QZC5;M0R1H6 P62280 P62280 RPS11 40S ribosomal protein S11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 412.7517 2 408.744911 815.475269 93648.77 -0.33155 -0.00013552 -0.1717 -7.0183E-05 -0.50325 -0.0002057 408.744592443526 412.751950201454 36.787 1.9968 36.787 36.515 38.512 0 657 164 7 0 0 0 0.048223 1 16353 44.395 17.274 1 1.0979 0.91213 0 37271000 17233000 20038000 37981 1641 14291 14678 59651 59651 VLLGPLSPYTIEFLR 15 0 1 Unmodified _VLLGPLSPYTIEFLR_ 0 0 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 859.4988 2 859.497998 1716.98144 66280.84 0.5714 0.00049112 0.71133 0.00061139 1.2827 0.0011025 859.498909539992 864.50283314297 133.46 0.29434 133.46 133.34 133.63 0 38 6 11 0 0 0 1.481E-30 2 89670 156.58 156.58 1 1.0197 1.1707 0 189060000 93889000 95168000 37982 2125 14292 14679 59652;59653 59652 VLLGPLSPYTIEFLR 15 0 1 Unmodified _VLLGPLSPYTIEFLR_ 0 0 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 859.9764 2 859.497998 1716.98144 NaN NaN NaN 1.4862 0.0012774 NaN NaN NaN NaN 134.89 0.14133 134.89 134.8 134.94 0 0 0 0 0.0092026 1 82596 50.786 31.127 1 NaN NaN 0 4498200 4498200 0 37983 2125 14292 14679 59654 59654 VLLGPLSPYTIEFLR 15 0 1 Unmodified _VLLGPLSPYTIEFLR_ 0 0 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 864.4084 2 859.497998 1716.98144 65372.26 0.8591 0.0007384 0.22281 0.00019151 1.0819 0.0009299 859.998942868698 864.502903936176 134.85 0.19141 134.85 134.76 134.95 -1.5259E-05 16 3 7 0 0 0 0.00022107 2 81656 65.395 65.395 1 1.0997 0.91056 0 14905000 7568200 7337100 37984 2125 14292 14679 59655;59656 59655 VLLGVGDPK 9 1 0 Unmodified _VLLGVGDPK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 449.2738 2 449.273835 896.533118 90771.83 0.19896 8.9389E-05 0.14469 6.5005E-05 0.34365 0.00015439 449.273808495146 453.28085401804 59.601 0.79683 59.601 59.253 60.05 0 320 65 7 0 0 0 0.0018938 2 33868 79.474 39.371 1 0.75483 0.872 0 223640000 133930000 89712000 37985 785 14293 14680 59657;59658 59658 VLLGVGDPK 9 1 0 Unmodified _VLLGVGDPK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.2811 2 449.273835 896.533118 90820.93 0.35096 0.00015768 0.93502 0.00042008 1.286 0.00057776 449.274074382927 453.281288997346 58.495 0.94592 58.495 58.171 59.117 0 353 82 7 0 0 0 0.0043049 2 33868 69.598 31.465 1 0.74844 0.86975 0 231410000 131160000 100250000 37986 785 14293 14680 59659;59660 59659 VLLGVGDPK 9 1 0 Unmodified _VLLGVGDPK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 449.2737 2 449.273835 896.533118 91250.3 0.057868 2.5999E-05 0.41987 0.00018864 0.47774 0.00021464 449.273969538625 453.28103445793 68.403 1.5154 68.403 67.88 69.396 0 425 107 6 0 0 0 0.0091583 2 35648 60.436 29.147 1 0.9635 0.78803 0 34571000 16917000 17654000 37987 785 14293 14680 59661;59662 59662 VLLGVGDPK 9 1 0 Unmodified _VLLGVGDPK_ 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 453.2806 2 449.273835 896.533118 91019 0.0067777 3.045E-06 0.83925 0.00037706 0.84603 0.0003801 449.274081252921 453.281284088328 68.752 1.5574 68.752 68.216 69.774 -7.6294E-06 441 108 6 0 0 0 0.037381 2 35023 43.083 20.952 1 0.9582 0.78729 0 27870000 14182000 13688000 37988 785 14293 14680 59663;59664 59664 VLLLAGR 7 0 1 Unmodified _VLLLAGR_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 371.2525 2 371.252706 740.490859 100155.9 0.10743 3.9886E-05 -0.24063 -8.9336E-05 -0.1332 -4.945E-05 371.252550152861 376.256635093421 62.979 0.54811 62.979 62.68 63.228 0 187 52 5 0 0 0 0.0125 1 36112 105.42 1.3843 1 1.0344 1.0497 0 28905000 13330000 15575000 37989 1450 14294 14681 59665 59665 VLLLAGR 7 0 1 Unmodified _VLLLAGR_ 0 0 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 371.253 2 371.252706 740.490859 101194.4 0.18893 7.014E-05 -0.029863 -1.1087E-05 0.15907 5.9054E-05 371.252667957255 376.256670184926 61.666 0.59844 61.666 61.342 61.94 0 204 54 5 0 0 0 0.016852 1 36089 97.64 0.80115 1 1.0111 1.1061 0 34241000 17701000 16541000 37990 1450 14294 14681 59666 59666 VLLLIDDEYK 10 1 0 Unmodified _VLLLIDDEYK_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.842 2 610.842279 1219.67001 77380.8 0.50613 0.00030917 -1.3305 -0.00081274 -0.82438 -0.00050357 610.842298580338 615.348874259401 100.55 0.90575 100.55 100.3 101.21 0 215 71 6 0 0 0 0.0027721 1 63113 67.563 57.975 1 0.96239 0.96484 0 13834000 6789700 7044600 37991 1913 14295 14682 59667 59667 VLLLSSPGLEELYR 14 0 1 Unmodified _VLLLSSPGLEELYR_ 0 0 0 B3KTJ9;Q8N163;E5RHJ4 B3KTJ9 B3KTJ9 CCAR2 Cell cycle and apoptosis regulator protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.9548 2 794.950881 1587.88721 70248.65 1.0215 0.00081203 1.4777 0.0011747 2.4992 0.0019867 795.454865221167 800.457359728431 118.87 0.44347 118.87 118.55 119 0 79 24 5 0 0 0 0.0007398 2 76246 58.676 52.444 1 0.95795 1.004 0 12387000 5628200 6759200 37992 943 14296 14683 59668;59669 59669 VLLLSSPGLEELYR 14 0 1 Unmodified _VLLLSSPGLEELYR_ 0 0 0 B3KTJ9;Q8N163;E5RHJ4 B3KTJ9 B3KTJ9 CCAR2 Cell cycle and apoptosis regulator protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.9552 2 794.950881 1587.88721 NaN NaN NaN 0.27508 0.00021868 NaN NaN NaN NaN 118.3 0.39407 118.3 118.14 118.54 7.6294E-06 0 0 0 0.0014503 1 77786 70.977 52.665 1 NaN NaN 0 4407200 0 4407200 37993 943 14296 14683 59670 59670 VLLLSSPGLEELYR 14 0 1 Unmodified _VLLLSSPGLEELYR_ 0 0 0 B3KTJ9;Q8N163;E5RHJ4 B3KTJ9 B3KTJ9 CCAR2 Cell cycle and apoptosis regulator protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 795.4529 2 794.950881 1587.88721 69721.79 1.011 0.00080373 -0.032335 -2.5705E-05 0.97871 0.00077802 794.95105006027 799.954636947938 130.75 0.36203 130.75 130.58 130.94 0 50 15 6 0 0 0 0.021914 2 78444 33.409 22.888 1 0.75276 0.66224 0 3624500 2265200 1359300 37994 943 14296 14683 59671;59672 59672 VLLPAIK 7 1 0 Unmodified _VLLPAIK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 381.2723 2 377.265282 752.516011 97774.16 0.15332 5.7843E-05 -0.11513 -4.3434E-05 0.038194 1.4409E-05 377.265129817653 381.27224078599 79.064 1.14 79.064 78.378 79.518 0 375 102 6 0 0 0 0.03153 2 46974 66.994 39.677 1 0.92358 1.0417 0 77372000 43112000 34260000 37995 897 14297 14684 59673;59674 59674 VLLPAIK 7 1 0 Unmodified _VLLPAIK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7;Q96ES5 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 377.2654 2 377.265282 752.516011 97157.73 0.32551 0.0001228 -0.15089 -5.6925E-05 0.17462 6.5877E-05 377.265110593851 381.272202504026 77.606 1.1489 77.606 77.106 78.255 0 385 96 6 0 0 0 0.040059 1 46800 59.641 31.326 1 0.96792 1.0879 0 56064000 27973000 28091000 37996 897 14297 14684 59675 59675 VLLPFTR 7 0 1 Unmodified _VLLPFTR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.2668 2 423.265813 844.517074 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.412 1 89.412 88.912 89.912 -7.6294E-06 0 0 0 0.019511 1 53983 97.068 41.627 1 37997 1937 14298 14685 59676 59676 VLLPTPPCGALQPGFPLQHDGERDPFTCPGFASQDK 36 1 1 Unmodified _VLLPTPPCGALQPGFPLQHDGERDPFTCPGFASQDK_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 993.2374 4 988.230458 3948.89273 62312.7 0.21941 0.00021683 -0.11875 -0.00011736 0.10066 9.9473E-05 988.73229293417 992.986789042829 127.23 0.39999 127.23 127.02 127.42 0 94 16 10 0 0 0 0.053023 1 76722 4.113 2.6751 1 1.8449 1.5218 0 5326300 1589600 3736800 37998 2002 14299 14686 59677 59677 VLLQASQDENFGNTTPR 17 0 1 Unmodified _VLLQASQDENFGNTTPR_ 0 0 0 P57740;G3V1T4 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 950.4744 2 945.471229 1888.9279 NaN NaN NaN -0.036128 -3.4158E-05 NaN NaN NaN NaN 73.09 0.21523 73.09 73.043 73.258 0 0 0 0 2.4791E-74 1 42914 190.1 176.67 1 NaN NaN 0 7753900 0 7753900 37999 1621 14300 14687 59678 59678 VLLQASQDENFGNTTPR 17 0 1 Unmodified _VLLQASQDENFGNTTPR_ 0 0 0 P57740;G3V1T4 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 950.4745 2 945.471229 1888.9279 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.085 1 72.085 71.585 72.585 0 0 0 0 1.0152E-12 1 43262 116.51 105.61 1 38000 1621 14300 14687 59679 59679 VLLQEEGTR 9 0 1 Unmodified _VLLQEEGTR_ 0 0 0 P15924;Q4LE79;B4E2A0 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 522.7882 2 522.787838 1043.56112 82945.98 0.89606 0.00046845 -0.37414 -0.0001956 0.52192 0.00027285 522.787708911465 527.791679953414 35.217 0.44452 35.217 34.988 35.433 0 135 41 5 0 0 0 0.0028813 1 17901 73.208 55.172 1 0.41733 0.45663 0 30745000 21852000 8892900 38001 1486 14301 14688 59680 59680 VLLSALER 8 0 1 Unmodified _VLLSALER_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.7837 2 450.779285 899.544017 110881 0.33499 0.00015101 -0.010623 -4.7886E-06 0.32437 0.00014622 450.778753737242 455.783535188814 71.713 0.20624 71.713 71.616 71.822 0 41 15 5 0 0 0 0.0099928 2 43051 73.26 30.26 1 1.6779 1.7993 0 25289000 9649900 15639000 38002 196 14302 14689 59681;59682 59681 VLLVGADNFTLLGK 14 1 0 Unmodified _VLLVGADNFTLLGK_ 0 0 0 A0A024R5G7;F5H7V8;H3BUY0;B4DXI4;Q7Z2W9 A0A024R5G7 A0A024R5G7 MRPL21 39S ribosomal protein L21, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.4363 2 730.429584 1458.84462 73486.69 0.94854 0.00069284 -0.70386 -0.00051412 0.24467 0.00017872 730.4293168091 734.435645067914 119.32 0.48763 119.32 119.09 119.58 7.6294E-06 113 34 6 0 0 0 0.00020691 1 78661 68.355 59.021 1 1.2355 1.2468 0 8011400 3423400 4588000 38003 180 14303 14690 59683 59683 VLLYLLSPR 9 0 1 Unmodified _VLLYLLSPR_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.3394 2 537.33951 1072.66447 82585.66 0.92869 0.00049902 -0.054984 -2.9545E-05 0.87371 0.00046948 537.339467859208 542.343352734292 111.3 0.77106 111.3 111.01 111.78 0 181 54 5 0 0 0 0.0034791 2 69916 71.692 71.692 1 0.75539 0.78668 0 21757000 11956000 9801000 38004 1761 14304 14691 59684;59685 59684 VLLYLLSPR 9 0 1 Unmodified _VLLYLLSPR_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.3404 2 537.33951 1072.66447 82989.06 0.67227 0.00036124 0.041729 2.2423E-05 0.714 0.00038366 537.339487180074 542.343406173502 110.58 0.77158 110.58 110.28 111.05 0 229 58 6 0 0 0 0.003784 2 71037 70.919 70.919 1 0.73927 0.74157 0 17569000 10364000 7204400 38005 1761 14304 14691 59686;59687 59686 VLLYLLSPR 9 0 1 Unmodified _VLLYLLSPR_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 542.3447 2 537.33951 1072.66447 83566.7 0.82398 0.00044276 0.076612 4.1167E-05 0.90059 0.00048392 537.33944821617 542.343482486895 122.26 1.0436 122.26 122.02 123.06 0 197 51 6 0 0 0 0.0043738 2 72811 69.423 69.423 1 0.8246 0.67474 0 13402000 7184400 6217500 38006 1761 14304 14691 59688;59689 59688 VLLYLLSPR 9 0 1 Unmodified _VLLYLLSPR_ 0 0 0 Q15397;B2RDG4 Q15397 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 537.3403 2 537.33951 1072.66447 83818.41 0.85552 0.00045971 -0.027206 -1.4619E-05 0.82832 0.00044509 537.339351537565 542.3435263572 122.08 0.97928 122.08 121.74 122.72 0 169 46 7 0 0 0 0.020683 2 71736 50.04 50.04 1 0.89076 0.74127 0 15622000 7998200 7623300 38007 1761 14304 14691 59690;59691 59691 VLMTCVGIGFSNLSK 15 1 0 Oxidation (M) _VLM(ox)TCVGIGFSNLSK_ VLM(1)TCVGIGFSNLSK VLM(63.94)TCVGIGFSNLSK 0 1 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 825.929 2 821.420576 1640.8266 67322.82 0.85993 0.00070636 0.030106 2.473E-05 0.89004 0.00073109 821.420063091407 825.428486238146 98.074 0.52212 98.074 97.85 98.372 0 119 41 5 0 0 0 0.00010665 2 59995 65.179 65.179 1 0.81858 0.80656 0 24439000 9768700 14671000 38008 2125 14305 14692 59692;59693 59693 1953 VLMTCVGIGFSNLSK 15 1 0 Oxidation (M) _VLM(ox)TCVGIGFSNLSK_ VLM(1)TCVGIGFSNLSK VLM(45.88)TCVGIGFSNLSK 0 1 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.4214 2 821.420576 1640.8266 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.979 1 97.979 97.479 98.479 0 0 0 0 0.0054669 1 59839 45.879 28.07 1 38009 2125 14305 14692 59694 59694 1953 VLMTCVGIGFSNLSK 15 1 0 Oxidation (M) _VLM(ox)TCVGIGFSNLSK_ VLM(1)TCVGIGFSNLSK VLM(75.48)TCVGIGFSNLSK 0 1 0 Q9Y2P8;Q5VZU3 Q9Y2P8 Q9Y2P8 RCL1 RNA 3-terminal phosphate cyclase-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 825.4324 2 821.420576 1640.8266 67270.7 0.97416 0.00080019 -0.030126 -2.4746E-05 0.94403 0.00077545 821.921041188665 825.929504632998 97.44 0.5498 97.44 97.104 97.653 0 160 42 5 0 0 0 0.00010459 3 60740 75.479 75.479 1 0.93794 1.0096 0 22742000 13623000 9119600 38010 2125 14305 14692 59695;59696;59697 59695 1953 VLNMKPPEILSMIEEAAGTR 20 1 1 2 Oxidation (M) _VLNM(ox)KPPEILSM(ox)IEEAAGTR_ VLNM(1)KPPEILSM(1)IEEAAGTR VLNM(74.78)KPPEILSM(74.78)IEEAAGTR 0 2 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q6P712;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.7277 3 744.38519 2230.13374 69666.95 0.76106 0.00056652 -0.10838 -8.0674E-05 0.65268 0.00048585 744.719654586382 750.392776738756 108.3 1.1626 108.3 107.48 108.65 0 595 87 9 0 0 0 5.2258E-07 2 67589 74.776 70.337 1 2.0124 2.4112 0 57902000 18283000 39619000 38011 69 14306 14693 59698;59699 59699 43;44 VLNMKPPEILSMIEEAAGTR 20 1 1 2 Oxidation (M) _VLNM(ox)KPPEILSM(ox)IEEAAGTR_ VLNM(1)KPPEILSM(1)IEEAAGTR VLNM(110.6)KPPEILSM(110.6)IEEAAGTR 0 2 1 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q7Z2X1;Q05D74;Q6P712;Q5T821 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.7283 3 744.38519 2230.13374 70019.55 0.76054 0.00056613 -0.028837 -2.1466E-05 0.7317 0.00054467 744.719472915199 750.7268647769 107.26 1.098 107.26 106.74 107.84 0 450 76 9 0 0 0 8.245E-14 2 68442 110.6 110.6 1 1.9077 2.2447 0 78331000 26318000 52013000 38012 69 14306 14693 59700;59701 59701 43;44 VLNNFISNQK 10 1 0 Unmodified _VLNNFISNQK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8306 2 588.822212 1175.62987 78062.98 0.83044 0.00048898 -0.1287 -7.5781E-05 0.70174 0.0004132 588.822044516561 592.829305773624 56.034 1.1905 56.034 55.648 56.839 0 456 98 8 0 0 0 4.9739E-16 2 31426 151.44 151.44 1 1.6606 1.9488 0 302830000 118970000 183870000 38013 1569;1864 14307 14694 59702;59703 59703 VLNNFISNQK 10 1 0 Unmodified _VLNNFISNQK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.8297 2 588.822212 1175.62987 78103.39 0.55788 0.00032849 -0.2132 -0.00012554 0.34468 0.00020296 588.822071597937 592.829135533782 54.963 1.243 54.963 54.623 55.866 0 421 96 8 0 0 0 8.6078E-12 2 31329 140.35 140.35 1 1.7853 2.0808 0 254360000 97611000 156750000 38014 1569;1864 14307 14694 59704;59705 59705 VLNNFISNQK 10 1 0 Unmodified _VLNNFISNQK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 592.8295 2 588.822212 1175.62987 78228.09 0.47835 0.00028167 0.032472 1.912E-05 0.51083 0.00030079 588.82225764859 592.829318850076 64.566 2.024 64.566 64.083 66.107 0 662 152 9 0 0 0 0.00021123 4 33559 93.701 93.701 1 3.4105 2.8339 0 46443000 10990000 35452000 38015 1569;1864 14307 14694 59706;59707;59708;59709 59709 VLNNFISNQK 10 1 0 Unmodified _VLNNFISNQK_ 0 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 592.8299 2 588.822212 1175.62987 78159.03 0.33399 0.00019666 0.073151 4.3073E-05 0.40714 0.00023973 588.82226103085 592.829340144005 64.964 2.3393 64.964 64.503 66.843 0 719 176 9 0 0 0 2.1193E-09 3 32999 128.93 128.93 1 3.35 2.8067 0 46495000 9897500 36598000 38016 1569;1864 14307 14694 59710;59711;59712 59711 VLNSYWVGEDSTYK 14 1 0 Unmodified _VLNSYWVGEDSTYK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7;E7EX53 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.8972 2 830.896303 1659.77805 65854.84 0.81978 0.00068115 0.041644 3.4602E-05 0.86142 0.00071575 830.896483795481 834.903316115668 81.822 1.3845 81.822 81.404 82.788 0 825 118 10 0 0 0 8.1478E-10 5 49099 122.34 113.83 1 0.69119 0.81889 0 460860000 267050000 193810000 38017 121 14308 14695 59713;59714;59715;59716;59717 59716 VLNSYWVGEDSTYK 14 1 0 Unmodified _VLNSYWVGEDSTYK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7;E7EX53 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.8964 2 830.896303 1659.77805 NaN NaN NaN 0.31192 0.00025917 NaN NaN NaN NaN 82.822 0.25019 82.822 82.761 83.012 0 0 0 0 0.010354 1 49550 51.841 38.178 1 NaN NaN 0 9242800 9242800 0 38018 121 14308 14695 59718 59718 VLNSYWVGEDSTYK 14 1 0 Unmodified _VLNSYWVGEDSTYK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7;E7EX53 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.904 2 830.896303 1659.77805 66042.2 0.90156 0.00074911 0.0039021 3.2422E-06 0.90547 0.00075235 830.896475345793 834.903281615733 80.771 1.3271 80.771 80.428 81.755 0 788 110 11 0 0 0 1.1965E-06 3 49631 109.16 103.31 1 0.6836 0.80451 0 400320000 227240000 173080000 38019 121 14308 14695 59719;59720;59721 59721 VLNSYWVGEDSTYK 14 1 0 Unmodified _VLNSYWVGEDSTYK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7;E7EX53 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.9042 2 830.896303 1659.77805 66233.49 0.67532 0.00056112 0.080584 6.6957E-05 0.7559 0.00062807 830.896507753583 834.903378519632 93.695 1.6008 93.695 93.254 94.855 0 676 104 11 0 0 0 9.7467E-05 3 52190 85.672 74.14 1 0.75149 0.64614 0 87967000 49286000 38682000 38020 121 14308 14695 59722;59723;59724 59723 VLNSYWVGEDSTYK 14 1 0 Unmodified _VLNSYWVGEDSTYK_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7ENU7;E7EX53 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 834.9045 2 830.896303 1659.77805 65520.23 0.72413 0.00060167 -0.023694 -1.9687E-05 0.70043 0.00058199 830.896459631333 834.90324672462 93.647 1.6721 93.647 93.26 94.932 0 718 107 10 0 0 0 0.00010959 3 51311 83.617 77.772 1 0.73506 0.62465 0 75312000 41137000 34175000 38021 121 14308 14695 59725;59726;59727 59726 VLNTNIDGR 9 0 1 Unmodified _VLNTNIDGR_ 0 0 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.2776 2 501.272355 1000.53016 84669.77 0.29287 0.00014681 0.036273 1.8183E-05 0.32914 0.00016499 501.272295366614 506.276412500932 35.266 1.0694 35.266 34.779 35.849 -3.8147E-06 446 98 8 0 0 0 0.00028235 3 17549 103.56 24.447 1 1.065 1.2434 0 197980000 98304000 99680000 38022 1639 14309 14696 59728;59729;59730 59729 VLNTNIDGR 9 0 1 Unmodified _VLNTNIDGR_ 0 0 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2729 2 501.272355 1000.53016 84425.84 0.63667 0.00031914 0.19163 9.606E-05 0.8283 0.0004152 501.272404262111 506.276566939207 34.388 0.74757 34.388 34.102 34.85 0 302 58 8 0 0 0 8.3342E-09 2 17309 149.65 57.747 1 1.0762 1.2496 0 346430000 163120000 183300000 38023 1639 14309 14696 59731;59732 59732 VLNTNIDGR 9 0 1 Unmodified _VLNTNIDGR_ 0 0 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 501.2731 2 501.272355 1000.53016 82649.41 0.10866 5.4469E-05 0.4528 0.00022698 0.56147 0.00028145 501.272613504826 506.276752900592 40.038 0.73262 40.038 39.674 40.406 0 281 56 8 0 0 0 0.0014178 1 18335 85.67 20.632 1 0.93215 0.76894 0 18701000 10050000 8651400 38024 1639 14309 14696 59733 59733 VLNTNIDGR 9 0 1 Unmodified _VLNTNIDGR_ 0 0 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.2728 2 501.272355 1000.53016 84744.45 -0.013468 -6.7512E-06 0.25869 0.00012967 0.24522 0.00012292 501.272525216448 506.276459975586 40.185 0.83843 40.185 39.747 40.586 0 293 69 6 0 0 0 0.0010049 1 17899 91.318 24.286 1 0.81825 0.66539 0 12354000 6784300 5569900 38025 1639 14309 14696 59734 59734 VLNVISLEFSDTR 13 0 1 Unmodified _VLNVISLEFSDTR_ 0 0 0 H0Y3N9;Q9UPP1;A0A024R9Y4 H0Y3N9 H0Y3N9 PHF8 Histone lysine demethylase PHF8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.9036 2 746.903931 1491.79331 NaN NaN NaN -0.46394 -0.00034652 NaN NaN NaN NaN 112.94 0.29459 112.94 112.79 113.08 0 0 0 0 0.0052574 1 71401 58.37 43.219 1 NaN NaN 0 2611900 2611900 0 38026 1279 14310 14697 59735 59735 VLNVISLEFSDTR 13 0 1 Unmodified _VLNVISLEFSDTR_ 0 0 0 H0Y3N9;Q9UPP1;A0A024R9Y4 H0Y3N9 H0Y3N9 PHF8 Histone lysine demethylase PHF8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.9097 2 746.903931 1491.79331 NaN NaN NaN 0.39218 0.00029292 NaN NaN NaN NaN 124.25 0.34549 124.25 124 124.34 0 0 0 0 0.041457 1 74393 41.164 31.806 1 NaN NaN 0 1127200 0 1127200 38027 1279 14310 14697 59736 59736 VLNVTNLEFSDTR 13 0 1 Unmodified _VLNVTNLEFSDTR_ 0 0 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.3958 2 754.391187 1506.76782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.828 1 94.828 94.328 95.328 0 0 0 0 0.0018217 1 57619 69.721 53.583 1 38028 1400 14311 14698 59737 59737 VLNVTNLEFSDTR 13 0 1 Unmodified _VLNVTNLEFSDTR_ 0 0 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 759.395 2 754.391187 1506.76782 NaN NaN NaN -2.271 -0.0017132 NaN NaN NaN NaN 94.084 0.20445 94.084 93.929 94.133 0 0 0 0 0.002927 1 58448 67.08 51.45 1 NaN NaN 0 8993100 0 8993100 38029 1400 14311 14698 59738 59738 VLNVTNLEFSDTR 13 0 1 Unmodified _VLNVTNLEFSDTR_ 0 0 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 759.3958 2 754.391187 1506.76782 70830.36 0.80779 0.00060939 -0.31627 -0.00023859 0.49152 0.0003708 754.892982795554 759.896089399457 108.18 0.4876 108.18 107.97 108.46 0 94 24 6 0 0 0 0.00014979 2 62072 88.441 70.577 1 1.493 1.2601 0 3015000 1106200 1908800 38030 1400 14311 14698 59739;59740 59739 VLNVTNLEFSDTR 13 0 1 Unmodified _VLNVTNLEFSDTR_ 0 0 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.3909 2 754.391187 1506.76782 70018.64 0.60275 0.00045471 -0.2549 -0.00019229 0.34785 0.00026241 754.391082156151 759.895615167535 108.15 0.47559 108.15 107.9 108.37 0 80 23 5 0 0 0 0.0022626 2 61138 54.471 39.205 1 1.423 1.258 0 3842500 1961700 1880800 38031 1400 14311 14698 59741;59742 59742 VLPITVPK 8 1 0 Unmodified _VLPITVPK_ 0 0 0 Q643R0;Q9ULW0;B3KM90 Q643R0 Q643R0 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.7962 2 433.789121 865.56369 92036.13 0.030231 1.3114E-05 0.024644 1.069E-05 0.054875 2.3804E-05 433.78900484194 437.796099899235 77.272 0.87888 77.272 76.82 77.699 0 311 72 6 0 0 0 0.022274 1 46603 57.281 34.262 1 0.70757 0.79847 0 65751000 37449000 28302000 38032 1837 14312 14699 59743 59743 VLPLEALVTDAGEVTEAGK 19 1 0 Unmodified _VLPLEALVTDAGEVTEAGK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.5363 2 956.517313 1911.02007 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.02 1 129.02 128.52 129.52 0 0 0 0 1.5866E-81 1 84140 190.27 131.57 1 38033 1205 14313 14700 59744 59744 VLPLEALVTDAGEVTEAGK 19 1 0 Unmodified _VLPLEALVTDAGEVTEAGK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.5254 2 956.517313 1911.02007 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.03 1 129.03 128.53 129.53 0 0 0 0 1.4316E-52 1 84142 160.27 131.51 1 38034 1205 14313 14700 59745 59745 VLPPPAGYVPIR 12 0 1 Unmodified _VLPPPAGYVPIR_ 0 0 0 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.8868 2 639.882073 1277.74959 NaN NaN NaN -0.05995 -3.8361E-05 NaN NaN NaN NaN 94.202 0.53787 94.202 93.842 94.38 0 0 0 0 0.0071817 1 57218 58.981 39.194 1 NaN NaN 0 12578000 0 12578000 38035 1408 14314 14701 59746 59746 VLPPPAGYVPIR 12 0 1 Unmodified _VLPPPAGYVPIR_ 0 0 0 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.8859 2 639.882073 1277.74959 NaN NaN NaN 0.052309 3.3471E-05 NaN NaN NaN NaN 93.308 0.67347 93.308 92.982 93.655 0 0 0 0 0.0069789 1 57867 59.35 39.02 1 NaN NaN 0 9482100 0 9482100 38036 1408 14314 14701 59747 59747 VLPQLISTITASVQNPALR 19 0 1 Unmodified _VLPQLISTITASVQNPALR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1016.5961 2 1011.09131 2020.16807 60914.82 0.72343 0.00073145 0.10835 0.00010955 0.83177 0.000841 1011.09160547069 1016.09596924705 128.74 0.21545 128.74 128.58 128.79 0 63 11 8 0 0 0 4.4119E-12 2 83926 106.32 99.846 1 1.7021 1.7396 0 26527000 9664400 16862000 38037 1205 14315 14702 59748;59749 59749 VLPQLISTITASVQNPALR 19 0 1 Unmodified _VLPQLISTITASVQNPALR_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1011.5992 2 1011.09131 2020.16807 61175.29 0.36505 0.0003691 0.51618 0.00052191 0.88123 0.00089101 1011.59374865222 1016.09698244741 128.39 0.24097 128.39 128.23 128.47 0 81 15 8 0 0 0 3.6849E-12 3 85753 107.37 102.66 1 1.8723 2.0615 0 41037000 15684000 25353000 38038 1205 14315 14702 59750;59751;59752 59752 VLPSFWIPSLTPEAK 15 1 0 Unmodified _VLPSFWIPSLTPEAK_ 0 0 0 A0A075B797;M0R3B2;A8K670;Q9Y314;A0A075B6F9 A0A075B797 A0A075B797 NOSIP Nitric oxide synthase-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.9781 2 842.969074 1683.92359 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.86 1 128.86 128.36 129.36 0 0 0 0 0.00025697 1 84051 83.182 60.303 1 38039 398 14316 14703 59753 59753 VLPSFWIPSLTPEAK 15 1 0 Unmodified _VLPSFWIPSLTPEAK_ 0 0 0 A0A075B797;M0R3B2;A8K670;Q9Y314;A0A075B6F9 A0A075B797 A0A075B797 NOSIP Nitric oxide synthase-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.4711 2 842.969074 1683.92359 NaN NaN NaN 0.55716 0.00046967 NaN NaN NaN NaN 128.42 0.10175 128.42 128.36 128.46 0 0 0 0 0.0004075 1 85861 73.435 56.068 1 NaN NaN 0 6234400 6234400 0 38040 398 14316 14703 59754 59754 VLPSFWIPSLTPEAK 15 1 0 Unmodified _VLPSFWIPSLTPEAK_ 0 0 0 A0A075B797;M0R3B2;A8K670;Q9Y314;A0A075B6F9 A0A075B797 A0A075B797 NOSIP Nitric oxide synthase-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.9781 2 842.969074 1683.92359 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.45 1 128.45 127.95 128.95 0 0 0 0 0.00037777 1 85862 81.625 63.357 1 38041 398 14316 14703 59755 59755 VLPSITTEILK 11 1 0 Unmodified _VLPSITTEILK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.3811 2 607.373746 1212.73294 78181.02 0.70988 0.00043116 -0.031654 -1.9226E-05 0.67823 0.00041194 607.373767898208 611.380718339369 107.35 1.315 107.35 106.98 108.29 7.6294E-06 523 98 10 0 0 0 0.00041586 2 66681 80.231 80.231 1 1.4544 1.7105 0 315630000 130110000 185520000 38042 730 14317 14704 59756;59757 59756 VLPSITTEILK 11 1 0 Unmodified _VLPSITTEILK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3817 2 607.373746 1212.73294 77939.54 0.72055 0.00043764 -0.13262 -8.0551E-05 0.58793 0.00035709 607.373713504919 611.380645892987 106.72 1.3028 106.72 106.33 107.63 7.6294E-06 557 94 10 0 0 0 0.00048456 2 67798 74.841 64.318 1 1.4722 1.7322 0 379220000 159490000 219740000 38043 730 14317 14704 59758;59759 59758 VLPSITTEILK 11 1 0 Unmodified _VLPSITTEILK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.3817 2 607.373746 1212.73294 77024.73 0.72528 0.00044052 -0.012715 -7.723E-06 0.71256 0.00043279 607.373725917428 611.380741411326 119.03 0.80856 119.03 118.78 119.59 -7.6294E-06 176 34 9 0 0 0 0.002424 2 70372 61.65 61.65 1 2.7419 2.2919 0 50067000 13698000 36369000 38044 730 14317 14704 59760;59761 59760 VLPSITTEILK 11 1 0 Unmodified _VLPSITTEILK_ 0 0 0 Q6PUJ7;A8K401;P35232;Q6FHP5;Q53FV0;C9JW96;C9JZ20;E7ESE2;E9PCW0 Q6PUJ7 Q6PUJ7 HEL-S-54e;PHB Prohibitin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.374 2 607.373746 1212.73294 78105.4 0.76321 0.00046355 -0.11067 -6.7215E-05 0.65255 0.00039634 607.373642049076 611.380695445132 118.82 0.8368 118.82 118.48 119.32 0 200 37 9 0 0 0 0.020958 2 69275 43.512 43.512 1 2.8356 2.3831 0 50213000 12583000 37630000 38045 730 14317 14704 59762;59763 59763 VLPSIVNEVLK 11 1 0 Unmodified _VLPSIVNEVLK_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.8817 2 605.873914 1209.73327 78392.58 0.73343 0.00044437 0.28809 0.00017455 1.0215 0.00061892 605.874106454328 609.881010327332 113.01 1.2581 113.01 112.68 113.94 7.6294E-06 525 92 9 0 0 0 1.9293E-05 2 71291 105.2 95.838 1 1.5716 1.8135 0 218840000 87293000 131540000 38046 1328 14318 14705 59764;59765 59764 VLPSIVNEVLK 11 1 0 Unmodified _VLPSIVNEVLK_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.8743 2 605.873914 1209.73327 78463.57 0.64794 0.00039257 0.16088 9.7471E-05 0.80882 0.00049004 605.874059380436 609.880915085969 112.4 1.4132 112.4 112.03 113.44 7.6294E-06 508 100 9 0 0 0 0.00047879 2 72528 75.294 70.092 1 1.5847 1.85 0 271960000 104800000 167160000 38047 1328 14318 14705 59766;59767 59767 VLPSIVNEVLK 11 1 0 Unmodified _VLPSIVNEVLK_ 0 0 0 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 605.8737 2 605.873914 1209.73327 78218.85 0.65075 0.00039427 0.36949 0.00022387 1.0202 0.00061814 605.874117109274 609.881126672593 124.73 1.1213 124.73 124.44 125.56 0 255 47 10 0 0 0 0.0076189 1 74685 52.278 52.278 1 2.7389 2.2477 0 37337000 9924300 27412000 38048 1328 14318 14705 59768 59768 VLPTQPNPVDASR 13 0 1 Unmodified _VLPTQPNPVDASR_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3789 2 697.37534 1392.73613 NaN NaN NaN -1.071 -0.00074686 NaN NaN NaN NaN 53.426 0.51822 53.426 53.122 53.64 0 0 0 0 0.0024253 1 29867 69.672 52.236 1 NaN NaN 0 20677000 0 20677000 38049 1913 14319 14706 59769 59769 VLPTQPNPVDASR 13 0 1 Unmodified _VLPTQPNPVDASR_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.8809 2 697.37534 1392.73613 71813.98 0.81542 0.00056866 -0.35867 -0.00025013 0.45675 0.00031853 697.375307059985 702.37971803158 52.397 1.06 52.397 51.709 52.769 0 251 81 6 0 0 0 0.034911 1 29680 32.523 14.212 1 0.38608 0.42425 0 40585000 30419000 10166000 38050 1913 14319 14706 59770 59770 VLPVLHLK 8 1 0 Unmodified _VLPVLHLK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;B4DM91;A6H8Z4;Q6AI50;F5GWN9;A0A0A0MSJ1;F5H797;F5H692;Q7Z607 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.8179 2 459.810388 917.606223 90675.28 0.28886 0.00013282 0.21494 9.8833E-05 0.5038 0.00023165 459.810369239818 463.817583749533 69.943 0.46141 69.943 69.728 70.189 0 115 37 4 0 0 0 0.031924 1 41671 50.966 50.966 1 1.0669 1.0934 0 17608000 9225000 8382800 38051 104 14320 14707 59771 59771 VLQALEGLK 9 1 0 Unmodified _VLQALEGLK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;A0A075B6E2 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 485.8001 2 485.800217 969.585882 87501.41 0.24056 0.00011686 0.5813 0.0002824 0.82186 0.00039926 485.800539881055 489.807414375947 76.02 1.0318 76.02 75.535 76.567 0 404 86 7 0 0 0 0.0096208 1 44587 60.019 30.643 1 1.2283 1.4152 0 212390000 95415000 116980000 38052 811 14321 14708 59772 59772 VLQALEGLK 9 1 0 Unmodified _VLQALEGLK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;A0A075B6E2 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.7995 2 485.800217 969.585882 87040.91 0.23191 0.00011266 0.25363 0.00012321 0.48554 0.00023588 485.800370645254 489.807281969527 74.823 1.4323 74.823 73.992 75.425 0 476 126 7 0 0 0 0.0011452 2 44792 89.355 50.563 1 1.1685 1.3515 0 202380000 92426000 109950000 38053 811 14321 14708 59773;59774 59774 VLQALEGLK 9 1 0 Unmodified _VLQALEGLK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;A0A075B6E2 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 489.8078 2 485.800217 969.585882 87601.84 0.14038 6.8195E-05 0.17671 8.5846E-05 0.31709 0.00015404 485.800122507992 489.807450950227 86.641 0.9223 86.641 86.192 87.114 0 210 58 5 0 0 0 0.016543 2 47633 53.775 14.983 1 1.1884 0.93842 0 5288900 2736200 2552700 38054 811 14321 14708 59775;59776 59776 VLQALEGLK 9 1 0 Unmodified _VLQALEGLK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;A0A075B6E2 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 489.8083 2 485.800217 969.585882 88244.73 0.28739 0.00013962 -0.025695 -1.2483E-05 0.2617 0.00012713 485.799988047165 489.807315599829 86.672 0.85155 86.672 86.181 87.033 0 211 53 6 0 0 0 0.0095109 2 46835 60.118 21.327 1 1.1623 0.90551 0 3595700 1603400 1992200 38055 811 14321 14708 59777;59778 59778 VLQALGSEPIQYAVPVVK 18 1 0 Unmodified _VLQALGSEPIQYAVPVVK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 956.0519 2 956.051126 1910.0877 62970.83 0.87693 0.00083839 -0.098119 -9.3807E-05 0.77881 0.00074459 956.552250466718 960.058323902898 113.43 0.50491 113.43 113.21 113.71 0 245 38 10 0 0 0 1.3223E-11 2 71738 102.62 102.62 1 1.2699 1.3669 0 38333000 18387000 19946000 38056 1088;1189 14322 14709 59779;59780 59780 VLQALGSEPIQYAVPVVK 18 1 0 Unmodified _VLQALGSEPIQYAVPVVK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 960.5593 2 956.051126 1910.0877 62522.05 0.54331 0.00051943 0.098029 9.372E-05 0.64134 0.00061315 956.552445633507 960.559922778257 112.88 0.42265 112.88 112.65 113.08 0 178 27 8 0 0 0 1.3738E-39 1 73063 158.4 158.4 1 1.1555 1.2436 0 37734000 19232000 18502000 38057 1088;1189 14322 14709 59781 59781 VLQALGSEPIQYAVPVVK 18 1 0 Unmodified _VLQALGSEPIQYAVPVVK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 956.5527 2 956.051126 1910.0877 62469 0.43343 0.00041438 0.4562 0.00043615 0.88963 0.00085053 956.050593170882 960.058559425052 124.71 0.51302 124.71 124.48 124.99 0 135 22 9 0 0 0 7.4911E-05 2 74771 50.467 50.467 1 2.0593 1.601 0 12550000 4370300 8179800 38058 1088;1189 14322 14709 59782;59783 59783 VLQALGSEPIQYAVPVVK 18 1 0 Unmodified _VLQALGSEPIQYAVPVVK_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 960.5593 2 956.051126 1910.0877 62282.18 0.4283 0.00040947 0.072272 6.9096E-05 0.50057 0.00047857 956.552939179687 960.058423395819 124.56 0.50048 124.56 124.35 124.85 0 143 23 9 0 0 0 0.00028629 1 73667 46.985 46.985 1 2.0153 1.6499 0 12546000 4484600 8061100 38059 1088;1189 14322 14709 59784 59784 VLQAPPPDVGNGEVPK 16 1 0 Unmodified _VLQAPPPDVGNGEVPK_ 0 0 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.9426 2 808.935762 1615.85697 69100.64 0.5485 0.0004437 0.30089 0.0002434 0.8494 0.00068711 808.935902345767 812.942901688785 66.639 0.54056 66.639 66.439 66.979 0 210 45 6 0 0 0 0.00025817 2 39450 57.175 57.175 1 0.49576 0.50567 0 25934000 18676000 7258800 38060 1991 14323 14710 59785;59786 59786 VLQAPPPDVGNGEVPK 16 1 0 Unmodified _VLQAPPPDVGNGEVPK_ 0 0 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 813.4443 2 808.935762 1615.85697 69601.62 0.4612 0.00037308 0.27755 0.00022452 0.73874 0.0005976 808.935956703594 812.942953608818 77.726 0.59861 77.726 77.465 78.064 0 196 40 7 0 0 0 0.054793 1 41552 22.578 22.578 1 0.97426 0.76046 0 3273300 1593700 1679600 38061 1991 14323 14710 59787 59787 VLQAPPPDVGNGEVPK 16 1 0 Unmodified _VLQAPPPDVGNGEVPK_ 0 0 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 812.9432 2 808.935762 1615.85697 68728.44 0.63356 0.00051251 0.26558 0.00021484 0.89914 0.00072735 808.935810745189 812.943006165793 78.046 0.5442 78.046 77.771 78.315 0 173 34 6 0 0 0 0.0033055 1 40936 37.18 37.18 1 0.98751 0.77319 0 3747200 1773900 1973300 38062 1991 14323 14710 59788 59788 VLQAQGSSDPEEESVLYSNR 20 0 1 Unmodified _VLQAQGSSDPEEESVLYSNR_ 0 0 0 Q15785;Q6ZPD0 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1109.53 2 1104.52439 2207.03422 NaN NaN NaN 0.066571 7.353E-05 NaN NaN NaN NaN 70.227 0.40653 70.227 69.997 70.403 0 0 0 0 9.8831E-07 1 40729 68.83 63.653 1 NaN NaN 0 5311700 0 5311700 38063 1765 14324 14711 59789 59789 VLQAQGSSDPEEESVLYSNR 20 0 1 Unmodified _VLQAQGSSDPEEESVLYSNR_ 0 0 0 Q15785;Q6ZPD0 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1104.526 2 1104.52439 2207.03422 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.27 1 70.27 69.77 70.77 0 0 0 0 0.046764 1 40871 32.275 26.891 1 38064 1765 14324 14711 59790 59790 VLQAQGSSDPEEESVLYSNR 20 0 1 Unmodified _VLQAQGSSDPEEESVLYSNR_ 0 0 0 Q15785;Q6ZPD0 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1110.03 2 1104.52439 2207.03422 NaN NaN NaN 0.0088209 9.7429E-06 NaN NaN NaN NaN 69.13 0.48721 69.13 68.912 69.399 0 0 0 0 3.9498E-10 1 41046 84.468 79.189 1 NaN NaN 0 8827500 0 8827500 38065 1765 14324 14711 59791 59791 VLQDLVMDILR 11 0 1 Unmodified _VLQDLVMDILR_ 0 0 0 P53618;E9PP73 P53618 P53618 COPB1 Coatomer subunit beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.8814 2 657.87613 1313.73771 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.87 1 129.87 129.37 130.37 0 0 0 0 0.0028994 1 86782 67.563 36.993 1 38066 1606 14325 14712 59792 59792 VLQDLVPDDRK 11 1 1 Unmodified _VLQDLVPDDRK_ 0 0 1 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 433.2412 3 433.241865 1296.70376 91408.92 -0.20615 -8.9314E-05 -0.4592 -0.00019894 -0.66535 -0.00028826 433.241550481032 439.249313261456 52.54 0.71891 52.54 52.232 52.951 3.8147E-06 222 51 7 0 0 0 0.0061409 1 29304 34.241 28.094 1 0.40735 0.485 0 47746000 37227000 10519000 38067 1275 14326 14713 59793 59793 VLQDLVPDDRK 11 1 1 Unmodified _VLQDLVPDDRK_ 0 0 1 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 433.2426 3 433.241865 1296.70376 91834.94 0.43501 0.00018846 0.94951 0.00041137 1.3845 0.00059983 433.242257176005 439.249861780976 50.905 0.50081 50.905 50.7 51.201 0 144 40 5 0 0 0 0.021504 1 28756 22.578 19.627 1 0.41707 0.48978 0 60640000 39422000 21218000 38068 1275 14326 14713 59794 59794 VLQDLVPDDRK 11 1 1 Unmodified _VLQDLVPDDRK_ 0 0 1 G3XAG1;Q96ME7;B4DES6;B7Z9P6;Q658M0;B4E0X7 G3XAG1 G3XAG1 ZNF512;DKFZp666L156 Zinc finger protein 512 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.3596 2 649.359159 1296.70376 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.913 1 50.913 50.413 51.413 0 0 0 0 0.00070785 1 28795 79.974 57.333 1 38069 1275 14326 14713 59795 59795 VLQEALCVISGVPGLK 16 1 0 Unmodified _VLQEALCVISGVPGLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.9871 2 841.979115 1681.94368 NaN NaN NaN 0.22752 0.00019156 NaN NaN NaN NaN 119.32 0.40515 119.32 119.12 119.53 0 0 0 0 0.00023118 1 76667 70.412 54.782 1 NaN NaN 0 6652400 0 6652400 38070 1205 14327 14714 59796 59796 VLQEALCVISGVPGLK 16 1 0 Unmodified _VLQEALCVISGVPGLK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1;B4DM32 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.4889 2 841.979115 1681.94368 NaN NaN NaN 0.10433 8.7847E-05 NaN NaN NaN NaN 118.78 0.39657 118.78 118.65 119.04 7.6294E-06 0 0 0 1.9278E-08 1 78165 94.122 79.703 1 NaN NaN 0 5021400 0 5021400 38071 1205 14327 14714 59797 59797 VLQHYQESDKGEELGPGNVQK 21 2 0 Unmodified _VLQHYQESDKGEELGPGNVQK_ 0 0 1 Q9Y6C9;Q53G34 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 786.0582 3 785.724027 2354.15025 68969.57 0.50926 0.00040014 0.47804 0.00037561 0.98731 0.00077575 785.724800950129 791.066661418292 33.238 0.28165 33.238 33.094 33.376 0 58 24 4 0 0 0 0.0014805 1 16645 30.587 30.587 1 1.4081 1.6084 0 14457000 5577100 8880300 38072 2152 14328 14715 59798 59798 VLQLFTR 7 0 1 Unmodified _VLQLFTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.7683 2 438.76872 875.522887 90581.48 0.12004 5.267E-05 0.088655 3.8899E-05 0.20869 9.1569E-05 438.768701837478 443.772702713126 79.555 1.4462 79.555 78.833 80.279 -7.6294E-06 548 128 6 0 0 0 0.010107 3 47118 119.57 81.364 1 0.92622 1.0384 0 91108000 48557000 42551000 38073 908 14329 14716 59799;59800;59801 59800 VLQLFTR 7 0 1 Unmodified _VLQLFTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 438.7683 2 438.76872 875.522887 90960.8 -0.034928 -1.5325E-05 0.038103 1.6719E-05 0.0031756 1.3934E-06 438.768630943295 443.772711766632 78.186 1.7911 78.186 77.432 79.223 -7.6294E-06 616 153 7 0 0 0 0.010262 3 47626 124.37 84.011 1 0.92502 1.0525 0 114450000 54780000 59666000 38074 908 14329 14716 59802;59803;59804 59804 VLQLFTR 7 0 1 Unmodified _VLQLFTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 443.7728 2 438.76872 875.522887 90508.68 -0.12083 -5.3016E-05 0.15252 6.6921E-05 0.03169 1.3905E-05 438.768770789458 443.77274142044 90.095 1.8934 90.095 89.439 91.333 0 475 122 6 0 0 0 0.01251 1 49864 105.39 67.189 1 1.5324 1.2698 0 20213000 7947700 12265000 38075 908 14329 14716 59805 59805 VLQLFTR 7 0 1 Unmodified _VLQLFTR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 443.7726 2 438.76872 875.522887 90063.16 -0.10666 -4.6799E-05 0.030083 1.32E-05 -0.076577 -3.36E-05 438.768718922298 443.772689578788 89.976 1.9858 89.976 89.357 91.343 7.6294E-06 512 125 8 0 0 0 0.020239 1 48913 94.262 56.06 1 1.5343 1.2949 0 17808000 7153300 10654000 38076 908 14329 14716 59806 59806 VLQLINDNTATALSYGVFR 19 0 1 Unmodified _VLQLINDNTATALSYGVFR_ 0 0 0 B7Z766;A0A087X054;B7Z2N4;B3KXH0;Q9Y4L1;E9PJ21;Q05D91;A0A087WWI4;Q6IN67;K7EQK2;J3KTF1;A0A024R3G0 B7Z766 B7Z766 HYOU1 Hypoxia up-regulated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1053.066 2 1048.06275 2094.11095 62477.05 0.82935 0.00086921 -0.40524 -0.00042472 0.4241 0.00044449 1049.06490539345 1053.56739903131 123.12 0.35062 123.12 122.92 123.28 -7.6294E-06 99 28 6 0 0 0 0.00045503 1 79785 40.941 40.941 1 2.2431 2.2932 0 6686300 2394400 4291900 38077 443 14330 14717 59807 59807 VLQLINDNTATALSYGVFR 19 0 1 Unmodified _VLQLINDNTATALSYGVFR_ 0 0 0 B7Z766;A0A087X054;B7Z2N4;B3KXH0;Q9Y4L1;E9PJ21;Q05D91;A0A087WWI4;Q6IN67;K7EQK2;J3KTF1;A0A024R3G0 B7Z766 B7Z766 HYOU1 Hypoxia up-regulated protein 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1048.5223 2 1048.06275 2094.11095 62429.61 0.84998 0.00089083 -0.67455 -0.00070697 0.17543 0.00018386 1048.06230828563 1053.56671156923 122.67 0.36523 122.67 122.49 122.85 0 100 30 7 0 0 0 0.0089622 1 81411 42.785 42.785 1 1.3906 1.3834 0 7782700 2674500 5108200 38078 443 14330 14717 59808 59808 VLQLLR 6 0 1 Unmodified _VLQLLR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036;C9JIJ5;C9JZ88;F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 A0A024R814;F2Z2U4 A0A024R814 RPL7;WUGSC:H_RG054D04.1;TRRAP 60S ribosomal protein L7;Transformation/transcription domain-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 371.2531 2 371.252706 740.490859 96776.38 0.13461 4.9976E-05 0.12458 4.625E-05 0.25919 9.6225E-05 371.252681845579 376.256801179328 68.16 1.764 68.16 67.831 69.595 0 649 153 7 0 0 0 0.036759 1 39805 120.78 0 1 0.97771 1.1564 0 287060000 139330000 147730000 38079 240;1253 14331 14718 59809 59809 VLQLLR 6 0 1 Unmodified _VLQLLR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036;C9JIJ5;C9JZ88;F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 A0A024R814;F2Z2U4 A0A024R814 RPL7;WUGSC:H_RG054D04.1;TRRAP 60S ribosomal protein L7;Transformation/transcription domain-associated protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 371.2526 2 371.252706 740.490859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.452 1 70.452 69.952 70.952 0 0 0 0 0.044456 1 41000 76.553 0 1 38080 240;1253 14331 14718 59810 59810 VLQLLR 6 0 1 Unmodified _VLQLLR_ 0 0 0 A0A024R814;P18124;A8MUD9;O95036;C9JIJ5;C9JZ88;F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 A0A024R814;F2Z2U4 A0A024R814 RPL7;WUGSC:H_RG054D04.1;TRRAP 60S ribosomal protein L7;Transformation/transcription domain-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 371.2527 2 371.252706 740.490859 97310.21 0.10249 3.805E-05 0.13146 4.8805E-05 0.23395 8.6856E-05 371.252691193597 376.256800783036 66.758 1.5159 66.758 66.388 67.904 0 551 127 8 0 0 0 0.034893 2 39823 120.78 0 1 0.9398 1.0916 0 355710000 184370000 171340000 38081 240;1253 14331 14718 59811;59812 59812 VLQPHPVTPSDTETR 15 0 1 Unmodified _VLQPHPVTPSDTETR_ 0 0 0 Q9HBB9;Q8WUM5;Q9HC39;I3L2C7;P57678;I3L399;E7EN12;B4DZ29;I3L4M4;I3L4A4 Q9HBB9 Q9HBB9 GEMIN4 Gem-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 562.9603 3 559.624926 1675.85295 82218.33 0.68701 0.00038447 -0.17548 -9.8202E-05 0.51153 0.00028626 559.959110471587 562.960941810061 36.418 0.40953 36.418 36.193 36.603 0 148 38 6 0 0 0 6.7701E-05 1 18388 63.682 63.682 1 1.6496 1.7013 0 24261000 11533000 12728000 38082 1940 14332 14719 59813 59813 VLQPHPVTPSDTETR 15 0 1 Unmodified _VLQPHPVTPSDTETR_ 0 0 0 Q9HBB9;Q8WUM5;Q9HC39;I3L2C7;P57678;I3L399;E7EN12;B4DZ29;I3L4M4;I3L4A4 Q9HBB9 Q9HBB9 GEMIN4 Gem-associated protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 562.9635 3 559.624926 1675.85295 80655.89 1.5139 0.00084719 -0.68004 -0.00038056 0.83382 0.00046663 559.624472114737 562.960727483453 35.313 0.30947 35.313 35.175 35.485 0 98 29 5 0 0 0 1.012E-05 4 17978 86.497 66.743 1 1.6309 1.7601 0 26389000 8287400 18102000 38083 1940 14332 14719 59814;59815;59816;59817 59814 VLQQFADNDVSR 12 0 1 Unmodified _VLQQFADNDVSR_ 0 0 0 E7EWE5;B4DSD0;B4DDM5;B2R659;A0A0S2Z4J1;P51659;Q59H27;E7EPL9;G5E9S2;B3KSP2;E7ET17;B4DI68 E7EWE5 E7EWE5 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.3538 2 696.349323 1390.68409 NaN NaN NaN -0.96069 -0.00066897 NaN NaN NaN NaN 50.654 0.20873 50.654 50.514 50.723 3.8147E-06 0 0 0 0.0056521 1 28618 61.765 38.445 1 NaN NaN 0 3720800 0 3720800 38084 563 14333 14720 59818 59818 VLQQGHFEDDDPDGFLG 17 0 0 Unmodified _VLQQGHFEDDDPDGFLG_ 0 0 0 Q6SPF0;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 945.4244 2 944.921037 1887.82752 NaN NaN NaN -0.1591 -0.00015034 NaN NaN NaN NaN 94.203 0.73327 94.203 93.876 94.609 0 0 0 0 0.004034 1 57075 51.979 46.007 1 38085 1861 14334 14721 59819 59819 VLQQGHFEDDDPDGFLG 17 0 0 Unmodified _VLQQGHFEDDDPDGFLG_ 0 0 0 Q6SPF0;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 944.9223 2 944.921037 1887.82752 NaN NaN NaN -0.3833 -0.00036219 NaN NaN NaN NaN 93.467 0.97039 93.467 93.192 94.163 0 0 0 0 4.2874E-07 1 57908 89.266 80.078 1 38086 1861 14334 14721 59820 59820 VLQQGHFEDDDPDGFLG 17 0 0 Unmodified _VLQQGHFEDDDPDGFLG_ 0 0 0 Q6SPF0;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 945.423 2 944.921037 1887.82752 NaN NaN NaN -0.32582 -0.00030787 NaN NaN NaN NaN 107.22 0.68674 107.22 106.96 107.64 -7.6294E-06 0 0 0 0.0090209 1 61377 44.564 38.957 1 38087 1861 14334 14721 59821 59821 VLQQGHFEDDDPDGFLG 17 0 0 Unmodified _VLQQGHFEDDDPDGFLG_ 0 0 0 Q6SPF0;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 944.9216 2 944.921037 1887.82752 NaN NaN NaN -0.35962 -0.00033981 NaN NaN NaN NaN 107.24 1.4406 107.24 106.9 108.34 0 0 0 0 0.049511 1 60417 31.989 26.144 1 38088 1861 14334 14721 59822 59822 VLQQTLNYINQGVSHALTWK 20 1 0 Unmodified _VLQQTLNYINQGVSHALTWK_ 0 0 0 O95373;B3KQG6 O95373 O95373 IPO7 Importin-7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.7561 3 771.749848 2312.22772 NaN NaN NaN -0.41396 -0.00031948 NaN NaN NaN NaN 116.17 0.42804 116.17 116.01 116.44 0 0 0 0 0.018711 1 74134 28.202 19.383 1 NaN NaN 0 7613300 0 7613300 38089 1424 14335 14722 59823 59823 VLQSEGEAVDPEANVIK 17 1 0 Unmodified _VLQSEGEAVDPEANVIK_ 0 0 0 B9EGR5;Q8IWI9;B4DVS1;H3BU53 B9EGR5;B4DVS1 B9EGR5 MGA MAX gene-associated protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.4655 2 899.465081 1796.91561 NaN NaN NaN -0.76181 -0.00068522 NaN NaN NaN NaN 74.92 0.3537 74.92 74.82 75.174 7.6294E-06 0 0 0 1.1031E-06 1 43975 83.204 58.912 1 NaN NaN 0 5277200 5277200 0 38090 1121;1042 14336 14723 59824 59824 VLQSEGEAVDPEANVIK 17 1 0 Unmodified _VLQSEGEAVDPEANVIK_ 0 0 0 B9EGR5;Q8IWI9;B4DVS1;H3BU53 B9EGR5;B4DVS1 B9EGR5 MGA MAX gene-associated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.4712 2 899.465081 1796.91561 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.931 1 74.931 74.431 75.431 0 0 0 0 0.004859 1 44004 51.211 12.577 1 38091 1121;1042 14336 14723 59825 59825 VLQSEGEAVDPEANVIK 17 1 0 Unmodified _VLQSEGEAVDPEANVIK_ 0 0 0 B9EGR5;Q8IWI9;B4DVS1;H3BU53 B9EGR5;B4DVS1 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.4653 2 899.465081 1796.91561 66913.8 0.57568 0.00051781 -0.34726 -0.00031235 0.22842 0.00020545 899.46446263386 903.973594430095 74.02 0.30385 74.02 73.816 74.12 0 61 24 4 0 0 0 4.8221E-09 1 44429 104.17 104.17 1 0.64973 0.6764 0 9987200 5994500 3992700 38092 1121;1042 14336 14723 59826 59826 VLQSEGEAVDPEANVIK 17 1 0 Unmodified _VLQSEGEAVDPEANVIK_ 0 0 0 B9EGR5;Q8IWI9;B4DVS1;H3BU53 B9EGR5;B4DVS1 B9EGR5 MGA MAX gene-associated protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.475 2 899.465081 1796.91561 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.89 1 73.89 73.39 74.39 0 0 0 0 0.0089803 1 44405 45.28 22.747 1 38093 1121;1042 14336 14723 59827 59827 VLQSEGEAVDPEANVIK 17 1 0 Unmodified _VLQSEGEAVDPEANVIK_ 0 0 0 B9EGR5;Q8IWI9;B4DVS1;H3BU53 B9EGR5;B4DVS1 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 899.965 2 899.465081 1796.91561 64523.69 0.36063 0.00032438 0.1988 0.00017881 0.55943 0.00050319 899.465038972472 903.973753738896 85.95 0.44281 85.95 85.723 86.165 0 93 28 6 0 0 0 0.017259 1 47094 27.098 27.098 1 1.7303 1.4624 0 1999100 705750 1293400 38094 1121;1042 14336 14723 59828 59828 VLQSEGEAVDPEANVIK 17 1 0 Unmodified _VLQSEGEAVDPEANVIK_ 0 0 0 B9EGR5;Q8IWI9;B4DVS1;H3BU53 B9EGR5;B4DVS1 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 903.9739 2 899.465081 1796.91561 68356.57 0.24409 0.00021955 0.07836 7.0482E-05 0.32245 0.00029003 899.966764610989 903.472646425577 86.123 0.39141 86.123 85.932 86.324 0 67 19 5 0 0 0 0.013792 1 46340 29.328 29.328 1 1.8246 1.4621 0 1960300 820230 1140000 38095 1121;1042 14336 14723 59829 59829 VLQVSIGPGLPK 12 1 0 Unmodified _VLQVSIGPGLPK_ 0 0 0 Q4KMR3;Q12965 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.3735 2 604.374081 1206.73361 79037.86 0.56473 0.00034131 -0.019262 -1.1641E-05 0.54547 0.00032967 604.374009321666 608.381120252417 107.81 0.60836 107.81 107.59 108.2 0 111 30 7 0 0 0 0.013411 1 60976 44.318 40.019 1 1.9036 1.5599 0 5377500 1549000 3828500 38096 1703 14337 14724 59830 59830 VLRPFLLR 8 0 2 Unmodified _VLRPFLLR_ 0 0 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;A0A0U1RQE1;P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8;A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;G1UI29;A0A087X0E3;B3KN63 A7E2E1;P51531;A0A0A0MS59 A7E2E1 SMARCA4;SMARCA2;SRCAP Transcription activator BRG1;Probable global transcription activator SNF2L2;Helicase SRCAP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 338.5588 3 338.5588 1012.65457 104216 -0.13622 -4.6117E-05 0.046126 1.5616E-05 -0.09009 -3.0501E-05 338.558750971897 345.230876182846 78.016 1.3301 78.016 77.301 78.631 -7.6294E-06 373 109 6 0 0 0 0.016989 2 46377 48.561 23.667 1 0.68556 0.74229 0 23451000 11200000 12250000 38097 695;1595;476 14338 14725 59831;59832 59832 VLRPFLLR 8 0 2 Unmodified _VLRPFLLR_ 0 0 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;B3KNW7;A0A0U1RQE1;P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8;A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;G1UI29;A0A087X0E3;B3KN63 A7E2E1;P51531;A0A0A0MS59 A7E2E1 SMARCA4;SMARCA2;SRCAP Transcription activator BRG1;Probable global transcription activator SNF2L2;Helicase SRCAP MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 338.5589 3 338.5588 1012.65457 101450.4 -0.02894 -9.7979E-06 -0.1413 -4.7839E-05 -0.17024 -5.7637E-05 338.558681361135 345.230886929732 75.445 0.98521 75.445 74.983 75.968 0 345 87 6 0 0 0 0.037795 1 45240 34.931 16.529 1 0.77555 0.89075 0 54686000 29489000 25197000 38098 695;1595;476 14338 14725 59833 59833 VLSAEALK 8 1 0 Unmodified _VLSAEALK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 419.76 2 415.752736 829.490919 91881.3 0.29683 0.00012341 0.42458 0.00017652 0.72141 0.00029993 415.752769389002 419.759973142177 42.492 0.73583 42.492 42.237 42.973 0 257 59 6 0 0 0 0.012282 2 22559 67.981 9.0636 1 1.0711 1.2053 0 119290000 59773000 59518000 38099 1741 14339 14726 59834;59835 59834 VLSAVVQTLVAK 12 1 0 Unmodified _VLSAVVQTLVAK_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.3873 2 614.387188 1226.75982 80606.71 0.49605 0.00030477 0.095 5.8367E-05 0.59105 0.00036313 614.387081692045 618.394486197366 99.673 0.57361 99.673 99.435 100.01 0 100 43 4 0 0 0 0.031274 1 62552 35.71 35.71 1 0.53181 0.55007 0 4759700 2910100 1849600 38100 898 14340 14727 59836 59836 VLSAVVQTLVAK 12 1 0 Unmodified _VLSAVVQTLVAK_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.8967 2 614.387188 1226.75982 84357.88 0.56441 0.00034677 0.32094 0.00019718 0.88535 0.00054395 614.387320489711 618.394414524028 113.05 0.55 113.05 112.85 113.4 7.6294E-06 64 27 4 0 0 0 0.015684 1 64877 42.718 42.718 1 2.6235 2.174 0 1739700 433390 1306300 38101 898 14340 14727 59837 59837 VLSDVDAFIAYVGTDQK 17 1 0 Unmodified _VLSDVDAFIAYVGTDQK_ 0 0 0 A8K5Y7;Q9HAV4;B3KPQ5;Q9H8N6;B3KNC6 A8K5Y7 A8K5Y7 XPO5 Exportin-5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 925.4788 2 920.969999 1839.92544 64683.18 0.74045 0.00068193 -0.30009 -0.00027638 0.44035 0.00040555 920.970266773746 924.97669117158 131.81 0.36278 131.81 131.59 131.95 0 51 16 5 0 0 0 0.0095331 1 80041 32.068 32.068 1 1.1114 0.93035 0 1845400 846870 998570 38102 754 14341 14728 59838 59838 VLSEAAISASLEK 13 1 0 Unmodified _VLSEAAISASLEK_ 0 0 0 B3KN05;B2RBE0;A0A024R497;O95573;B3KMA6;Q6PIM8 B3KN05 B3KN05 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 663.3746 2 659.36665 1316.71875 74385.03 0.80984 0.00053398 -0.74165 -0.00048902 0.068197 4.4967E-05 659.366794760811 663.373004334924 80.535 0.61652 80.535 80.194 80.811 0 245 52 6 0 0 0 0.00024044 1 47976 68.536 57.778 1 2.1082 2.1992 0 29849000 9160400 20688000 38103 150 14342 14729 59839 59839 VLSGEFQIVNPHLLK 15 1 0 Unmodified _VLSGEFQIVNPHLLK_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8;B4DS95;B4DXD1;E9PL69;B4DXB0 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.3323 3 565.32604 1692.95629 NaN NaN NaN 0.42923 0.00024265 NaN NaN NaN NaN 102.62 0.79427 102.62 102.28 103.07 -7.6294E-06 0 0 0 0.0073568 1 63208 41.644 34.762 1 NaN NaN 0 14418000 0 14418000 38104 1014 14343 14730 59840 59840 VLSGEFQIVNPHLLK 15 1 0 Unmodified _VLSGEFQIVNPHLLK_ 0 0 0 B4DNN4;Q53GZ5;P23921;B4E0I8;B4DS95;B4DXD1;E9PL69;B4DXB0 B4DNN4 B4DNN4 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.3325 3 565.32604 1692.95629 80753.43 0.74063 0.0004187 -0.048175 -2.7234E-05 0.69245 0.00039146 565.6599997086 568.331889900947 101.58 0.76507 101.58 101.15 101.91 -7.6294E-06 220 60 6 0 0 0 0.00020682 2 63934 52.484 52.484 1 3.8375 4.0235 0 24091000 4067800 20024000 38105 1014 14343 14730 59841;59842 59841 VLSGTIHAGQPVK 13 1 0 Unmodified _VLSGTIHAGQPVK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 438.9253 3 436.254105 1305.74048 91123.2 0.038174 1.6654E-05 -0.33636 -0.00014674 -0.29819 -0.00013009 436.253663080863 438.925217781895 33.798 0.50611 33.798 33.57 34.076 0 234 48 8 0 0 0 0.030893 1 16823 22.578 14.967 1 0.90507 1.0199 0 75332000 39699000 35633000 38106 794 14344 14731 59843 59843 VLSGTIHAGQPVK 13 1 0 Unmodified _VLSGTIHAGQPVK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.8786 2 653.877519 1305.74048 75984.31 0.80177 0.00052426 0.085007 5.5584E-05 0.88678 0.00057984 653.877330071031 657.884447986529 33.768 0.31221 33.768 33.644 33.956 0 104 30 4 0 0 0 9.0741E-05 1 16830 115.57 89.132 1 0.88766 0.9339 0 30611000 16877000 13734000 38107 794 14344 14731 59844 59844 VLSGTIHAGQPVK 13 1 0 Unmodified _VLSGTIHAGQPVK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.2534 3 436.254105 1305.74048 91138.77 0.36296 0.00015834 -0.75411 -0.00032898 -0.39115 -0.00017064 436.253590647797 438.925147138265 32.69 0.42545 32.69 32.497 32.922 0 205 38 8 0 0 0 5.1493E-05 2 16262 72.089 62.301 1 0.96139 1.0755 0 85289000 43260000 42029000 38108 794 14344 14731 59845;59846 59846 VLSGTIHAGQPVK 13 1 0 Unmodified _VLSGTIHAGQPVK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.8795 2 653.877519 1305.74048 NaN NaN NaN 0.31059 0.00020309 NaN NaN NaN NaN 32.694 0.29856 32.694 32.534 32.832 0 0 0 0 2.4826E-06 1 16221 103.87 81.343 1 NaN NaN 0 18456000 18456000 0 38109 794 14344 14731 59847 59847 VLSGTIHAGQPVK 13 1 0 Unmodified _VLSGTIHAGQPVK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 653.8779 2 653.877519 1305.74048 76336.95 0.66153 0.00043256 0.19421 0.00012699 0.85574 0.00055955 653.877390206341 657.884520916924 38.345 0.33698 38.345 38.194 38.531 0 89 23 5 0 0 0 0.0027279 1 17391 67.334 56.81 1 0.85848 0.72611 0 2054800 1075800 978990 38110 794 14344 14731 59848 59848 VLSHVNSGCQLLPQHQVPAY 20 0 0 Unmodified _VLSHVNSGCQLLPQHQVPAY_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 750.0491 3 749.71615 2246.12662 NaN NaN NaN -0.21258 -0.00015937 NaN NaN NaN NaN 78.805 0.51532 78.805 78.472 78.988 -7.6294E-06 0 0 0 0.0028133 2 46642 36.127 21.841 1 38111 1492 14345 14732 59849;59850 59850 VLSHVNSGCQLLPQHQVPAY 20 0 0 Unmodified _VLSHVNSGCQLLPQHQVPAY_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 750.0502 3 749.71615 2246.12662 NaN NaN NaN -0.26525 -0.00019886 NaN NaN NaN NaN 77.28 0.48476 77.28 76.994 77.479 0 0 0 0 0.00023859 1 46716 38.271 24.644 1 38112 1492 14345 14732 59851 59851 VLSHVNSGCQLLPQHQVPAY 20 0 0 Unmodified _VLSHVNSGCQLLPQHQVPAY_ 0 0 0 P17535 P17535 P17535 JUND Transcription factor jun-D ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 750.051 3 749.71615 2246.12662 NaN NaN NaN -0.17038 -0.00012774 NaN NaN NaN NaN 90.038 0.39114 90.038 89.853 90.244 0 0 0 0 0.016229 1 49868 21.398 18.16 1 38113 1492 14345 14732 59852 59852 VLSIGDGIAR 10 0 1 Unmodified _VLSIGDGIAR_ 0 0 0 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 505.7969 2 500.792924 999.571294 88042.17 0.47466 0.00023771 -0.073619 -3.6868E-05 0.40105 0.00020084 500.792959104583 505.796879438689 70.534 0.44931 70.534 70.317 70.766 0 114 36 4 0 0 0 0.036959 1 41065 40.002 16.573 1 1.5097 1.5214 0 15676000 5925000 9750900 38114 1518 14346 14733 59853 59853 VLSIGDGIAR 10 0 1 Unmodified _VLSIGDGIAR_ 0 0 0 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 505.7971 2 500.792924 999.571294 87274.24 0.29969 0.00015008 -0.28261 -0.00014153 0.017086 8.5564E-06 500.792834463628 505.796914231723 69.299 0.40681 69.299 69.091 69.497 0 112 33 5 0 0 0 0.0011713 2 41249 75.043 40.871 1 1.4447 1.4219 0 14467000 6302300 8164600 38115 1518 14346 14733 59854;59855 59855 VLSIGDGIAR 10 0 1 Unmodified _VLSIGDGIAR_ 0 0 0 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.7932 2 500.792924 999.571294 89945 0.14479 7.2508E-05 0.033573 1.6813E-05 0.17836 8.9322E-05 500.792990632259 505.796999744763 80.416 0.3417 80.416 80.229 80.571 -7.6294E-06 48 26 4 0 0 0 0.043945 1 43524 37.191 12.268 1 0.64716 0.57138 0 1384300 704560 679710 38116 1518 14346 14733 59856 59856 VLSIQSHVIR 10 0 1 Unmodified _VLSIQSHVIR_ 0 0 0 A8MV33;G1UI32;V9HWC3;O00764 A8MV33 A8MV33 PDXK;HEL-S-1a Pyridoxal kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 387.9051 3 384.568024 1150.68224 NaN NaN NaN -0.14284 -5.4931E-05 NaN NaN NaN NaN 49.562 0.56713 49.562 49.227 49.794 0 0 0 0 0.0043611 1 27865 58.699 49.212 1 NaN NaN 0 9463300 0 9463300 38117 797 14347 14734 59857 59857 VLSMAPGLTSVEIIPFR 17 0 1 Oxidation (M) _VLSM(ox)APGLTSVEIIPFR_ VLSM(1)APGLTSVEIIPFR VLSM(91.96)APGLTSVEIIPFR 0 1 0 Q5TB52;B4DWB5;O95340;Q9UIR2 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 929.0175 2 923.51078 1845.00701 63597.49 1.0511 0.00097073 -0.054108 -4.9969E-05 0.99702 0.00092076 924.011474505794 928.514630843554 123.27 0.46702 123.27 123.01 123.47 0 162 37 6 0 0 0 4.3194E-07 1 79872 91.961 91.961 1 4.5728 4.6496 0 14950000 2339500 12611000 38118 1044 14348 14735 59858 59858 819 VLSMAPGLTSVEIIPFR 17 0 1 Oxidation (M) _VLSM(ox)APGLTSVEIIPFR_ VLSM(1)APGLTSVEIIPFR VLSM(83.62)APGLTSVEIIPFR 0 1 0 Q5TB52;B4DWB5;O95340;Q9UIR2 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 929.0176 2 923.51078 1845.00701 NaN NaN NaN 0.10334 9.544E-05 NaN NaN NaN NaN 122.76 0.55505 122.76 122.53 123.09 0 0 0 0 3.2921E-07 1 81450 83.617 69.459 1 NaN NaN 0 14662000 0 14662000 38119 1044 14348 14735 59859 59859 819 VLSPFAPDYIQR 12 0 1 Unmodified _VLSPFAPDYIQR_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6;H0YMN5 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.3777 2 703.377352 1404.74015 76707.28 0.70017 0.00049249 -0.253 -0.00017795 0.44718 0.00031453 703.377045771352 708.380836727042 97.01 0.5947 97.01 96.649 97.244 0 137 51 5 0 0 0 0.00095797 2 59207 63.283 52.475 1 0.79513 0.7949 0 8881900 5356700 3525100 38120 288 14349 14736 59860;59861 59861 VLSPFAPDYIQR 12 0 1 Unmodified _VLSPFAPDYIQR_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6;H0YMN5 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.382 2 703.377352 1404.74015 75239.84 0.67159 0.00047238 0.19227 0.00013524 0.86386 0.00060762 703.376604874891 708.381143157933 96.199 0.66844 96.199 95.901 96.57 0 164 58 5 0 0 0 0.00088952 1 59897 64.297 54.501 1 0.73475 0.76452 0 22178000 9581600 12596000 38121 288 14349 14736 59862 59862 VLSPFAPDYIQR 12 0 1 Unmodified _VLSPFAPDYIQR_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6;H0YMN5 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 708.3804 2 703.377352 1404.74015 74045.11 0.77178 0.00054285 -0.47872 -0.00033672 0.29306 0.00020613 703.376764818668 708.381102370476 109.7 0.5457 109.7 109.46 110.01 0 118 26 6 0 0 0 0.0049154 2 63167 52.278 48.391 1 1.6531 1.3895 0 4377900 1427300 2950600 38122 288 14349 14736 59863;59864 59863 VLSPFAPDYIQR 12 0 1 Unmodified _VLSPFAPDYIQR_ 0 0 0 A0A024R9R7;Q9ULG1;A8K2V6;H0YMN5 A0A024R9R7 A0A024R9R7 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 708.3821 2 703.377352 1404.74015 73431.88 0.72117 0.00050726 -0.59806 -0.00042066 0.12312 8.6597E-05 703.376461374937 708.38107949047 109.54 0.50119 109.54 109.34 109.84 -7.6294E-06 105 23 6 0 0 0 0.01102 2 62159 46.001 46.001 1 1.6515 1.4043 0 4603900 1695800 2908100 38123 288 14349 14736 59865;59866 59865 VLSRPNAQELPSMYQR 16 0 2 Oxidation (M) _VLSRPNAQELPSM(ox)YQR_ VLSRPNAQELPSM(1)YQR VLSRPNAQELPSM(54.77)YQR 0 1 1 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.6602 3 635.659753 1903.95743 74877.46 0.64698 0.00041126 -0.3089 -0.00019635 0.33808 0.0002149 635.659746052693 642.33190167723 48.067 0.95258 48.067 47.763 48.716 0 530 78 12 0 0 0 7.7713E-05 1 26097 54.768 54.768 1 2.3528 2.5704 0 235220000 69866000 165350000 38124 1328 14350 14737 59867 59867 1005 VLSRPNAQELPSMYQR 16 0 2 Oxidation (M) _VLSRPNAQELPSM(ox)YQR_ VLSRPNAQELPSM(1)YQR VLSRPNAQELPSM(40.58)YQR 0 1 1 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 962.9945 2 952.985992 1903.95743 62541.99 0.33362 0.00031793 -0.052635 -5.016E-05 0.28098 0.00026777 953.487281818337 962.994302367636 48.03 0.37995 48.03 47.863 48.243 0 58 32 7 0 0 0 0.0021317 1 26140 40.577 40.577 1 2.1627 2.3485 0 31444000 7118400 24325000 38125 1328 14350 14737 59868 59868 1005 VLSRPNAQELPSMYQR 16 0 2 Oxidation (M) _VLSRPNAQELPSM(ox)YQR_ VLSRPNAQELPSM(1)YQR VLSRPNAQELPSM(79.84)YQR 0 1 1 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.6595 3 635.659753 1903.95743 74451.37 0.78207 0.00049713 -0.20464 -0.00013008 0.57743 0.00036705 635.659808791004 642.666148063583 46.604 0.82341 46.604 46.369 47.193 0 449 70 11 0 0 0 2.3987E-05 2 25720 79.837 79.837 1 2.2721 2.7527 0 438410000 132530000 305880000 38126 1328 14350 14737 59869;59870 59870 1005 VLSRPNAQELPSMYQR 16 0 2 Oxidation (M) _VLSRPNAQELPSM(ox)YQR_ VLSRPNAQELPSM(1)YQR VLSRPNAQELPSM(42.28)YQR 0 1 1 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.6663 3 635.659753 1903.95743 75975.47 0.65297 0.00041507 -0.39994 -0.00025422 0.25304 0.00016085 635.993761882778 642.331858171702 56.565 0.64777 56.565 56.281 56.929 0 262 45 8 0 0 0 0.00053093 1 27827 42.277 42.277 1 1.8533 1.6824 0 5885300 2149000 3736200 38127 1328 14350 14737 59871 59871 1005 VLSRPNAQELPSMYQR 16 0 2 Unmodified _VLSRPNAQELPSMYQR_ 0 0 1 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.0007 3 630.328115 1887.96252 75850.6 0.48667 0.00030676 -1.329 -0.00083772 -0.84235 -0.00053096 630.325720590639 637.334081935522 62.677 0.54599 62.677 62.439 62.985 3.8147E-06 195 49 7 0 0 0 0.0011638 1 36718 40.547 36.579 1 0.70734 0.7664 0 17096000 9223800 7872400 38128 1328 14350 14738 59872 59872 VLSRPNAQELPSMYQR 16 0 2 Unmodified _VLSRPNAQELPSMYQR_ 0 0 1 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 637.0009 3 630.328115 1887.96252 76626.55 0.61077 0.00038499 -0.85401 -0.00053831 -0.24324 -0.00015332 630.326894155718 637.000377880363 73.981 0.93371 73.981 73.506 74.44 0 243 65 8 0 0 0 0.00010295 1 39141 58.814 48.475 1 3.3052 2.8146 0 7304600 1977400 5327300 38129 1328 14350 14738 59873 59873 VLSRPNAQELPSMYQR 16 0 2 Unmodified _VLSRPNAQELPSMYQR_ 0 0 1 J3KPX7;Q99623;F5GY37;B4DW05;F5GWA7;F5H3X6 J3KPX7 J3KPX7 PHB2 Prohibitin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.0012 3 630.328115 1887.96252 76309.53 0.53465 0.000337 -0.45732 -0.00028826 0.077327 4.8741E-05 630.325567401433 637.000383420604 74.31 0.8764 74.31 73.91 74.786 0 216 58 8 0 0 0 0.0014986 1 38652 37.438 33.267 1 3.34 3.0265 0 5218300 1446100 3772200 38130 1328 14350 14738 59874 59874 VLSTVHTHSSVK 12 1 0 Unmodified _VLSTVHTHSSVK_ 0 0 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.9134 3 432.241976 1293.7041 89320.09 -0.25828 -0.00011164 -0.35096 -0.0001517 -0.60924 -0.00026334 432.242043685051 434.913570418015 17.768 0.37365 17.768 17.617 17.991 0 42 13 8 0 0 0 0.00024169 1 4902 65.842 65.842 1 1.5354 1.5362 0 26638000 9908200 16730000 38131 32 14351 14739 59875 59875 VLSTVHTHSSVK 12 1 0 Unmodified _VLSTVHTHSSVK_ 0 0 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.9131 3 432.241976 1293.7041 NaN NaN NaN -0.019072 -8.2438E-06 NaN NaN NaN NaN 17.307 0.43632 17.307 17.167 17.604 0 0 0 0 0.035313 1 4298 33.968 19.522 1 NaN NaN 0 26941000 0 26941000 38132 32 14351 14739 59876 59876 VLSTVHTHSSVK 12 1 0 Unmodified _VLSTVHTHSSVK_ 0 0 0 B2R7M3;A0A024QZY1;Q13155;A8MU58;F8W950 B2R7M3 B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 434.9132 3 432.241976 1293.7041 92315.55 -0.55716 -0.00024083 0.33267 0.00014379 -0.22449 -9.7033E-05 432.242068720543 434.913520652556 18.472 0.2604 18.472 18.357 18.617 0 55 11 8 0 0 0 0.04927 1 4481 20.463 20.463 1 0.88661 0.69729 0 3989000 2146500 1842500 38133 32 14351 14739 59877 59877 VLSVDWTDTGLLLSGGADNK 20 1 0 Unmodified _VLSVDWTDTGLLLSGGADNK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1035.5381 2 1031.02858 2060.0426 60693.03 0.88121 0.00090855 0.34261 0.00035324 1.2238 0.0012618 1031.53022527327 1035.53678274518 123.09 0.49634 123.09 122.86 123.35 7.6294E-06 245 39 8 0 0 0 4.6269E-09 2 79773 94.09 94.09 1 0.85714 0.92145 0 39981000 20884000 19097000 38134 1792 14352 14740 59878;59879 59879 VLSVDWTDTGLLLSGGADNK 20 1 0 Unmodified _VLSVDWTDTGLLLSGGADNK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1031.0299 2 1031.02858 2060.0426 60373.16 0.6958 0.00071739 0.10375 0.00010697 0.79954 0.00082435 1031.53008548344 1035.53685728888 122.69 0.56025 122.69 122.41 122.97 -7.6294E-06 212 45 6 0 0 0 5.5787E-14 2 81321 112.15 112.15 1 0.89195 1.0012 0 55413000 29426000 25986000 38135 1792 14352 14740 59880;59881 59880 VLSVDWTDTGLLLSGGADNK 20 1 0 Unmodified _VLSVDWTDTGLLLSGGADNK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1035.5385 2 1031.02858 2060.0426 NaN NaN NaN 0.13629 0.00014051 NaN NaN NaN NaN 134.49 0.20029 134.49 134.39 134.59 0 0 0 0 4.2898E-10 1 82166 83.729 75.818 1 NaN NaN 0 27316000 0 27316000 38136 1792 14352 14740 59882 59882 VLSVDWTDTGLLLSGGADNK 20 1 0 Unmodified _VLSVDWTDTGLLLSGGADNK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1035.0358 2 1031.02858 2060.0426 60541.68 0.46337 0.00047774 0.030755 3.1709E-05 0.49412 0.00050945 1031.53030565748 1035.035079356 134.43 0.27557 134.43 134.32 134.59 0 48 9 10 0 0 0 6.9073E-20 2 81189 125.28 125.28 1 1.1939 1.0106 0 60004000 25401000 34603000 38137 1792 14352 14740 59883;59884 59883 VLTAEELNAAQTSVAYGCIK 20 1 0 Unmodified _VLTAEELNAAQTSVAYGCIK_ 0 0 0 P54136;B4DXW6 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1069.5422 2 1069.54354 2137.07252 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.343 1 97.343 96.843 97.843 0 0 0 0 0.019866 1 59377 40.552 30.226 1 38138 1609 14353 14741 59885 59885 VLTDYYR 7 0 1 Unmodified _VLTDYYR_ 0 0 0 Q5TB52;B4DWB5;O95340;Q9UIR2 Q5TB52 Q5TB52 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.2444 2 465.239993 928.465432 NaN NaN NaN -0.45113 -0.00020988 NaN NaN NaN NaN 44.053 0.45755 44.053 43.868 44.326 0 0 0 0 0.031834 1 23993 73.039 33.496 1 NaN NaN 0 16889000 0 16889000 38139 1044 14354 14742 59886 59886 VLTELLEQERK 11 1 1 Unmodified _VLTELLEQERK_ 0 0 1 E7ETY2;B4DRA2;Q13428 E7ETY2;Q13428 Q13428 TCOF1 Treacle protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 453.2317 3 453.261036 1356.76128 95022.05 0.13006 5.895E-05 0.28713 0.00013014 0.41718 0.00018909 453.261330215315 459.268046592986 64.06 0.6859 64.06 63.743 64.429 0 139 63 4 0 0 0 0.034267 1 37760 28.806 25.089 1 0.8404 0.93228 0 10077000 6575400 3502000 38140 1712;1225 14355 14743 59887 59887 VLTFDLTK 8 1 0 Unmodified _VLTFDLTK_ 0 0 0 Q14683;G8JLG1 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.7736 2 468.773668 935.532783 90186.09 0.32894 0.0001542 -0.056439 -2.6457E-05 0.2725 0.00012774 468.773661846576 472.780735997397 85.786 0.61029 85.786 85.48 86.09 -7.6294E-06 202 52 6 0 0 0 0.010755 1 51463 71.501 23.653 1 0.91283 0.96802 0 15740000 7932800 7806800 38141 1739 14356 14744 59888 59888 VLTFDLTK 8 1 0 Unmodified _VLTFDLTK_ 0 0 0 Q14683;G8JLG1 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.7739 2 468.773668 935.532783 91219.98 0.25135 0.00011783 -0.18951 -8.8836E-05 0.06184 2.8989E-05 468.773619389822 472.780620122248 84.754 0.6242 84.754 84.439 85.063 0 179 52 5 0 0 0 0.0099928 1 52016 73.26 23.902 1 0.93113 0.94075 0 28603000 13409000 15194000 38142 1739 14356 14744 59889 59889 VLTFLR 6 0 1 Unmodified _VLTFLR_ 0 0 0 A0A024RDQ0;A0A024RDS1;Q92598;B4DF68;B4DZB4;A0A0A0MSM0;B4DY72;Q8TDX9 A0A024RDQ0 A0A024RDQ0 HSPH1;PKD1L1 Heat shock protein 105 kDa;Polycystic kidney disease protein 1-like 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 374.7395 2 374.739431 747.46431 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.754 1 75.754 75.254 76.254 0 0 0 0 0.036923 1 44583 87.839 0 1 38143 390 14357 14745 59890 59890 VLTIDPTEFK 10 1 0 Unmodified _VLTIDPTEFK_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 585.8287 2 581.821347 1161.62814 NaN NaN NaN 0.57357 0.00033372 NaN NaN NaN NaN 93.308 0.75513 93.308 92.993 93.748 0 0 0 0 0.0025843 1 57818 79.906 61.871 1 NaN NaN 0 17713000 0 17713000 38144 1607 14358 14746 59891 59891 VLTISTLR 8 0 1 Unmodified _VLTISTLR_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.7872 2 451.78711 901.559667 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.392 1 71.392 70.892 71.892 0 0 0 0 0.045242 1 41651 56.177 7.8312 1 38145 1224 14359 14747 59892 59892 VLTISTLR 8 0 1 Unmodified _VLTISTLR_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.7871 2 451.78711 901.559667 89989.84 0.056911 2.5712E-05 0.090598 4.0931E-05 0.14751 6.6643E-05 451.787192057056 456.791294844942 70.171 0.70145 70.171 69.728 70.429 0 182 58 4 0 0 0 0.014493 1 41761 62.88 16.859 1 1.2412 1.3375 0 25966000 12630000 13336000 38146 1224 14359 14747 59893 59893 VLTPELYAELR 11 0 1 Unmodified _VLTPELYAELR_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;G3V4N7;G3V461 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.3706 2 652.366453 1302.71835 NaN NaN NaN -0.39732 -0.0002592 NaN NaN NaN NaN 100.17 0.74797 100.17 99.882 100.63 7.6294E-06 0 0 0 0.0026408 1 61393 72.643 32.598 1 NaN NaN 0 16608000 0 16608000 38147 557 14360 14748 59894 59894 VLTPELYAELR 11 0 1 Unmodified _VLTPELYAELR_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;G3V4N7;G3V461 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.3671 2 652.366453 1302.71835 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.16 1 100.16 99.659 100.66 0 0 0 0 0.0058682 1 61390 64.04 39.117 1 38148 557 14360 14748 59895 59895 VLTPELYAELR 11 0 1 Unmodified _VLTPELYAELR_ 0 0 0 V9HWH2;V9HW77;A0A0S2Z471;P12277;B4DP56;G3V4N7;G3V461 V9HWH2 V9HWH2 HEL-S-29;HEL-211;CKB Creatine kinase B-type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.3709 2 652.366453 1302.71835 74803.24 0.79022 0.00051551 -0.26737 -0.00017442 0.52285 0.00034109 652.867011770561 657.370370330569 99.411 0.64407 99.411 99.125 99.769 0 217 52 6 0 0 0 0.00040176 2 62293 81.338 81.338 1 4.9247 5.1478 0 22571000 3579000 18992000 38149 557 14360 14748 59896;59897 59897 VLTQEDFQK 9 1 0 Unmodified _VLTQEDFQK_ 0 0 0 E7EW05;B4DT66;Q9NVU7 E7EW05 E7EW05 SDAD1 Protein SDA1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.2881 2 554.287671 1106.56079 80840.36 0.77045 0.00042705 0.069488 3.8516E-05 0.83994 0.00046557 554.287716537412 558.294829588149 44.699 0.39449 44.699 44.495 44.889 0 108 29 5 0 0 0 0.024384 1 20716 48.283 48.283 1 0.79241 0.64798 0 1873800 1116200 757610 38150 1032 14361 14749 59898 59898 VLTSGIFETK 10 1 0 Unmodified _VLTSGIFETK_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;B0AZR9;Q14455;S4R3E3 Q5FWY2 Q5FWY2 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.8082 2 547.808239 1093.60193 82535.23 0.68233 0.00037379 -0.15578 -8.5337E-05 0.52656 0.00028845 547.808349822742 551.815215708211 75.707 0.66748 75.707 75.319 75.986 0 169 57 4 0 0 0 0.002232 1 44576 70.028 35.775 1 1.6823 1.7084 0 13635000 5611700 8022800 38151 549 14362 14750 59899 59899 VLTVINQTQK 10 1 0 Unmodified _VLTVINQTQK_ 0 0 0 P42766;F2Z388;A0A024R866 P42766 P42766 RPL35 60S ribosomal protein L35 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.3474 2 572.340238 1142.66592 79182.27 0.33044 0.00018912 -0.33127 -0.0001896 -0.00083185 -4.761E-07 572.34012725366 576.34713118286 45.746 1.5419 45.746 45.152 46.694 0 900 135 10 0 0 0 5.1171E-65 3 24822 215.88 193.64 1 0.56125 0.67881 0 1746200000 1127300000 618820000 38152 1567 14363 14751 59900;59901;59902 59902 VLTVINQTQK 10 1 0 Unmodified _VLTVINQTQK_ 0 0 0 P42766;F2Z388;A0A024R866 P42766 P42766 RPL35 60S ribosomal protein L35 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.3403 2 572.340238 1142.66592 80503.43 0.62408 0.00035718 -0.13333 -7.6308E-05 0.49075 0.00028088 572.339920568546 576.347323052321 46.852 0.28585 46.852 46.694 46.98 0 95 26 5 0 0 0 0.0010279 3 25316 77.355 77.355 1 0.44663 0.45608 0 17820000 10933000 6887100 38153 1567 14363 14751 59903;59904;59905 59903 VLTVINQTQK 10 1 0 Unmodified _VLTVINQTQK_ 0 0 0 P42766;F2Z388;A0A024R866 P42766 P42766 RPL35 60S ribosomal protein L35 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.3474 2 572.340238 1142.66592 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.257 1 45.257 44.757 45.757 0 0 0 0 1.8454E-08 1 24369 115.7 46.501 1 38154 1567 14363 14751 59906 59906 VLTVINQTQK 10 1 0 Unmodified _VLTVINQTQK_ 0 0 0 P42766;F2Z388;A0A024R866 P42766 P42766 RPL35 60S ribosomal protein L35 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 576.3478 2 572.340238 1142.66592 79381.96 0.75958 0.00043474 -0.5986 -0.0003426 0.16098 9.2134E-05 572.340051063986 576.347066382694 44.847 1.238 44.847 44.399 45.637 0 701 103 12 0 0 0 3.0008E-08 4 24802 119.86 119.86 1 0.5944 0.7043 0 3048700000 1960700000 1088000000 38155 1567 14363 14751 59907;59908;59909;59910 59909 VLTVINQTQK 10 1 0 Unmodified _VLTVINQTQK_ 0 0 0 P42766;F2Z388;A0A024R866 P42766 P42766 RPL35 60S ribosomal protein L35 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.34 2 572.340238 1142.66592 78884.91 0.26632 0.00015242 -0.37583 -0.0002151 -0.10952 -6.268E-05 572.340516012015 576.346997474331 52.219 3.297 52.219 51.839 55.136 0 1251 253 10 0 0 0 3.9319E-30 5 25685 175.91 175.91 1 0.61085 0.54239 0 357110000 219850000 137260000 38156 1567 14363 14751 59911;59912;59913;59914;59915 59912 VLTVINQTQK 10 1 0 Unmodified _VLTVINQTQK_ 0 0 0 P42766;F2Z388;A0A024R866 P42766 P42766 RPL35 60S ribosomal protein L35 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 572.3397 2 572.340238 1142.66592 79309.93 0.28598 0.00016368 -0.60848 -0.00034826 -0.3225 -0.00018458 572.340138873731 576.346895913035 52.491 5.3674 52.491 51.94 57.307 0 1573 378 10 0 0 0 9.1249E-12 6 25214 139.74 139.74 1 0.60458 0.52398 0 265540000 165980000 99563000 38157 1567 14363 14751 59916;59917;59918;59919;59920;59921 59916 VLVAQHDVYK 10 1 0 Unmodified _VLVAQHDVYK_ 0 0 0 A0A0S2Z3L0;P13804;A0A0S2Z3M4;H0YL12;H0YKF0;H0YLU7 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.3355 2 586.327131 1170.63971 NaN NaN NaN 0.06769 3.9688E-05 NaN NaN NaN NaN 30.403 0.46589 30.403 30.089 30.555 0 0 0 0 0.0011608 1 14859 87.476 44.23 1 NaN NaN 0 11535000 0 11535000 38158 553 14364 14752 59922 59922 VLVATNVAAR 10 0 1 Unmodified _VLVATNVAAR_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q9NTA9 B4DW97 B4DW97 DDX50;mcdrh;DKFZp761E0323 ATP-dependent RNA helicase DDX50 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.3092 2 507.308741 1012.60293 NaN NaN NaN -0.045014 -2.2836E-05 NaN NaN NaN NaN 47.951 0.47503 47.951 47.641 48.116 0 0 0 0 0.042278 1 26036 48.794 17.505 1 NaN NaN 0 7681400 7681400 0 38159 416 14365 14753 59923 59923 VLVATNVAAR 10 0 1 Unmodified _VLVATNVAAR_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110;Q9NTA9 B4DW97 B4DW97 DDX50;mcdrh;DKFZp761E0323 ATP-dependent RNA helicase DDX50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.3124 2 507.308741 1012.60293 87493.97 0.57193 0.00029015 -0.3665 -0.00018593 0.20543 0.00010422 507.30841181934 512.312773176502 46.742 0.47391 46.742 46.537 47.011 3.8147E-06 146 41 5 0 0 0 0.00051176 1 25871 85.676 66.161 1 1.4869 1.4812 0 16495000 6896000 9599300 38160 416 14365 14753 59924 59924 VLVDQTTGLSR 11 0 1 Unmodified _VLVDQTTGLSR_ 0 0 0 Q15717 Q15717 Q15717 ELAVL1 ELAV-like protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.837 2 594.832777 1187.651 NaN NaN NaN -0.12977 -7.7193E-05 NaN NaN NaN NaN 52.401 0.75434 52.401 51.996 52.75 0 0 0 0 0.00064368 1 29006 89.08 44.326 1 NaN NaN 0 38946000 0 38946000 38161 1764 14366 14754 59925 59925 VLVDQTTGLSR 11 0 1 Unmodified _VLVDQTTGLSR_ 0 0 0 Q15717 Q15717 Q15717 ELAVL1 ELAV-like protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.8333 2 594.832777 1187.651 79586.68 0.64241 0.00038213 0.022153 1.3177E-05 0.66457 0.00039531 594.832834732079 599.836765589366 51.249 0.54484 51.249 50.943 51.488 0 195 42 7 0 0 0 6.4195E-13 2 28960 147.75 79.857 1 1.7215 1.996 0 58101000 23066000 35035000 38162 1764 14366 14754 59926;59927 59927 VLVDQTTGLSR 11 0 1 Unmodified _VLVDQTTGLSR_ 0 0 0 Q15717 Q15717 Q15717 ELAVL1 ELAV-like protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.8367 2 594.832777 1187.651 80330.92 0.40319 0.00023983 -0.31429 -0.00018695 0.088902 5.2882E-05 594.832567228351 599.836751313167 59.939 0.60551 59.939 59.694 60.299 0 151 38 6 0 0 0 0.013755 2 30669 47.187 29.367 1 1.1759 1.0214 0 2265100 1048200 1216900 38163 1764 14366 14754 59928;59929 59929 VLVDQTTGLSR 11 0 1 Unmodified _VLVDQTTGLSR_ 0 0 0 Q15717 Q15717 Q15717 ELAVL1 ELAV-like protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.8333 2 594.832777 1187.651 NaN NaN NaN 0.17114 0.0001018 NaN NaN NaN NaN 60.559 0.47066 60.559 60.328 60.798 0 0 0 0 0.043606 1 30351 46.158 24.695 1 NaN NaN 0 913010 913010 0 38164 1764 14366 14754 59930 59930 VLVDSSFGQPTTQGEAR 17 0 1 Unmodified _VLVDSSFGQPTTQGEAR_ 0 0 0 D3DWL9;Q10570 D3DWL9 D3DWL9 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.4512 2 896.447222 1790.87989 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.538 1 67.538 67.038 68.038 0 0 0 0 0.00057531 1 40023 57.802 49.497 1 38165 1198 14367 14755 59931 59931 VLVEGPLNNLR 11 0 1 Unmodified _VLVEGPLNNLR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;B3KY55 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.3607 2 612.358962 1222.70337 80119.66 0.77472 0.00047441 -0.02068 -1.2664E-05 0.75404 0.00046174 612.358984264563 617.363021682522 85.082 0.646 85.082 84.724 85.37 0 190 55 6 0 0 0 0.014335 1 52216 46.891 46.891 1 2.2859 2.3825 0 22321000 7623300 14697000 38166 231 14368 14756 59932 59932 VLVEITDVDFAALK 14 1 0 Unmodified _VLVEITDVDFAALK_ 0 0 0 B2RDX0;A8K7Z9;A0A024R6R1;Q8NEM2 B2RDX0 B2RDX0 SHCBP1 SHC SH2 domain-binding protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 770.9401 2 766.932157 1531.84976 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.57 1 121.57 121.07 122.07 0 0 0 0 0.0028022 1 78587 59.542 30.815 1 38167 207 14369 14757 59933 59933 VLVEITDVDFAALK 14 1 0 Unmodified _VLVEITDVDFAALK_ 0 0 0 B2RDX0;A8K7Z9;A0A024R6R1;Q8NEM2 B2RDX0 B2RDX0 SHCBP1 SHC SH2 domain-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.9399 2 766.932157 1531.84976 NaN NaN NaN -0.090053 -6.9064E-05 NaN NaN NaN NaN 121.24 0.32526 121.24 121.09 121.41 0 0 0 0 0.013864 1 80232 49.466 34.493 1 NaN NaN 0 3878600 0 3878600 38168 207 14369 14757 59934 59934 VLVHPPQDGEDEPTLVQK 18 1 0 Unmodified _VLVHPPQDGEDEPTLVQK_ 0 0 0 M0R208;Q16740 M0R208 M0R208 CLPP ATP-dependent Clp protease proteolytic subunit;ATP-dependent Clp protease proteolytic subunit, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.6872 3 667.6811 2000.02147 74979.3 0.79069 0.00052793 -0.14779 -9.8676E-05 0.6429 0.00042925 668.015270332283 670.352493114416 65.538 0.66851 65.538 65.223 65.891 0 156 60 5 0 0 0 1.1582E-05 1 37818 61.815 61.815 1 2.7658 2.8242 0 13174000 3656000 9518200 38169 1356 14370 14758 59935 59935 VLVHPPQDGEDEPTLVQK 18 1 0 Unmodified _VLVHPPQDGEDEPTLVQK_ 0 0 0 M0R208;Q16740 M0R208 M0R208 CLPP ATP-dependent Clp protease proteolytic subunit;ATP-dependent Clp protease proteolytic subunit, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.354 3 667.6811 2000.02147 76313.7 0.54344 0.00036285 0.33741 0.00022528 0.88085 0.00058813 668.351074758872 670.352674352016 63.969 0.60089 63.969 63.698 64.299 0 164 55 5 0 0 0 0.0036183 1 37792 27.838 27.838 1 2.7878 2.8389 0 12352000 1993500 10359000 38170 1356 14370 14758 59936 59936 VLVIGELGVGK 11 1 0 Unmodified _VLVIGELGVGK_ 0 0 0 B2R5I8;Q13637 B2R5I8 B2R5I8 RAB32 Ras-related protein Rab-32 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.3502 2 542.342249 1082.66995 NaN NaN NaN 0.20271 0.00010994 NaN NaN NaN NaN 98.057 0.61058 98.057 97.838 98.449 0 0 0 0 0.012829 1 59920 55.549 15.548 1 NaN NaN 0 6325800 0 6325800 38171 833 14371 14759 59937 59937 VLVIGELGVGK 11 1 0 Unmodified _VLVIGELGVGK_ 0 0 0 B2R5I8;Q13637 B2R5I8 B2R5I8 RAB32 Ras-related protein Rab-32 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.3495 2 542.342249 1082.66995 89469.66 0.78854 0.00042766 0.25766 0.00013974 1.0462 0.0005674 542.342526883026 546.349373223394 97.28 0.57437 97.28 97.014 97.588 0 111 44 4 0 0 0 0.0054128 1 60712 56.258 24.324 1 2.248 2.3243 0 4769100 1482400 3286700 38172 833 14371 14759 59938 59938 VLVLAPTR 8 0 1 Unmodified _VLVLAPTR_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110 B4DW97 B4DW97 DDX50;mcdrh ATP-dependent RNA helicase DDX50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 434.7839 2 434.78437 867.554188 91418.19 -0.051529 -2.2404E-05 0.3754 0.00016322 0.32387 0.00014081 434.78435610129 439.788629984378 61.868 0.4798 61.868 61.589 62.069 3.8147E-06 155 38 6 0 0 0 0.008243 1 35402 79.469 48.179 1 1.0948 1.1177 0 30968000 14799000 16169000 38173 416 14372 14760 59939 59939 VLVLAPTR 8 0 1 Unmodified _VLVLAPTR_ 0 0 0 B4DW97;A0A087WVC1;Q9BQ39;B4DED6;K0J110 B4DW97 B4DW97 DDX50;mcdrh ATP-dependent RNA helicase DDX50 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 434.7838 2 434.78437 867.554188 91994.13 0.071382 3.1036E-05 0.002495 1.0848E-06 0.073877 3.212E-05 434.784167754135 439.788504341931 60.517 0.35318 60.517 60.295 60.648 -3.8147E-06 100 21 6 0 0 0 0.0050709 2 35363 91.626 55.441 1 1.1683 1.2798 0 31634000 14374000 17260000 38174 416 14372 14760 59940;59941 59941 VLVLSQDYGK 10 1 0 Unmodified _VLVLSQDYGK_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.3235 2 561.313689 1120.61282 82027.77 0.63328 0.00035547 0.39805 0.00022343 1.0313 0.0005789 561.313614828156 565.321233275865 61.649 1.0047 61.649 61.304 62.308 -3.8147E-06 250 92 4 0 0 0 0.010142 2 35978 53.756 38.606 1 1.3284 1.3344 0 13668000 6369900 7298100 38175 415 14373 14761 59942;59943 59943 VLVLVPTR 8 0 1 Unmodified _VLVLVPTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.7997 2 448.80002 895.585488 89367.41 0.36077 0.00016192 0.055183 2.4766E-05 0.41596 0.00018668 448.799913143646 453.804061870879 80.459 0.93078 80.459 80.061 80.991 0 439 79 7 0 0 0 0.027047 2 47670 54.157 38.718 1 0.81785 0.93088 0 114780000 62200000 52580000 38176 899;1099 14374 14762 59944;59945 59944 VLVLVPTR 8 0 1 Unmodified _VLVLVPTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.8003 2 448.80002 895.585488 89747.72 0.19531 8.7656E-05 0.22281 9.9999E-05 0.41813 0.00018765 448.799999411597 453.804125506551 79.236 1.022 79.236 78.857 79.879 0 429 86 7 0 0 0 0.0050709 2 48014 91.626 62.288 1 0.77951 0.88702 0 126470000 70154000 56312000 38177 899;1099 14374 14762 59946;59947 59947 VLVLVPTR 8 0 1 Unmodified _VLVLVPTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 453.804 2 448.80002 895.585488 89558.56 0.31434 0.00014107 -0.0010584 -4.7503E-07 0.31328 0.0001406 448.799931263375 453.80403344845 91.32 1.1434 91.32 90.945 92.088 0 329 76 6 0 0 0 0.027047 1 50625 54.157 38.718 1 1.0683 0.87222 0 14421000 6771500 7649600 38178 899;1099 14374 14762 59948 59948 VLVLVPTR 8 0 1 Unmodified _VLVLVPTR_ 0 0 0 B3GQE6;A0A087X059;B7Z6D5;Q96GQ7 B3GQE6;B7Z6D5 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 448.799 2 448.80002 895.585488 89810.67 0.022336 1.0024E-05 0.031917 1.4324E-05 0.054252 2.4348E-05 448.799920363871 453.804079541287 91.146 1.229 91.146 90.689 91.918 0 334 78 6 0 0 0 0.056359 1 49594 41.429 25.99 1 1.0208 0.83044 0 12419000 6407800 6011100 38179 899;1099 14374 14762 59949 59949 VLVPATDR 8 0 1 Unmodified _VLVPATDR_ 0 0 0 E5RGA2;B3KW56;Q6IAX5;B2R806;P60228 E5RGA2 E5RGA2 EIF3E Eukaryotic translation initiation factor 3 subunit E MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 435.7564 2 435.75581 869.497067 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.627 1 36.627 36.127 37.127 0 0 0 0 0.042516 1 18856 57.047 27.671 1 38180 857 14375 14763 59950 59950 VLVPGIPGHHAAIK 14 1 0 Unmodified _VLVPGIPGHHAAIK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 470.2856 3 470.285628 1407.83505 87323.87 0.31067 0.0001461 -0.31742 -0.00014928 -0.0067488 -3.1739E-06 470.285423247627 472.956828966835 65.029 0.89986 65.029 64.798 65.698 0 335 68 8 0 0 0 0.014685 2 33549 26.124 25.3 1 1.2091 0.95887 0 10248000 5191600 5056800 38181 1752 14376 14764 59951;59952 59952 VLVPGIPGHHAAIK 14 1 0 Unmodified _VLVPGIPGHHAAIK_ 0 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 472.9569 3 470.285628 1407.83505 88399.47 0.071054 3.3416E-05 -0.14186 -6.6713E-05 -0.070803 -3.3298E-05 470.285552567137 472.95693579345 64.762 0.7942 64.762 64.479 65.274 0 370 63 9 0 0 0 0.042497 1 32581 19.058 19.058 1 1.1673 0.95975 0 9932800 4701700 5231100 38182 1752 14376 14764 59953 59953 VLVQHCPAR 9 0 1 Unmodified _VLVQHCPAR_ 0 0 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 360.5307 3 360.530804 1078.57058 104483.4 0.13588 4.899E-05 -0.22142 -7.9829E-05 -0.085538 -3.0839E-05 360.530577644462 363.86698118774 18.485 0.33864 18.485 18.311 18.649 0 32 11 5 0 0 0 0.0011654 2 5214 60.436 60.436 1 0.66065 0.66603 0 6366600 3033400 3333200 38183 1323 14377 14765 59954;59955 59954 VLVSGLPPSGSWQDLK 16 1 0 Unmodified _VLVSGLPPSGSWQDLK_ 0 0 0 Q13242;A8K3M9 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.9684 2 841.959237 1681.90392 66767.27 0.80386 0.00067682 0.26671 0.00022456 1.0706 0.00090137 842.460992900615 845.966548678886 106.61 0.78966 106.61 106.14 106.93 7.6294E-06 200 58 5 0 0 0 0.00041056 2 66041 62.924 53.237 1 1.8369 1.8035 0 20371000 8494700 11876000 38184 1709 14378 14766 59956;59957 59956 VLVTGATGLLGR 12 0 1 Unmodified _VLVTGATGLLGR_ 0 0 0 A8K7A4;A0A140VJP2;Q9NZL9;E5RJR3 A8K7A4 A8K7A4 MAT2B Methionine adenosyltransferase 2 subunit beta MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.8246 2 578.856055 1155.69756 84237.63 0.83632 0.00048411 0.59889 0.00034667 1.4352 0.00083078 578.856592479448 583.860426914492 87.666 0.37094 87.666 87.533 87.904 0 74 26 4 0 0 0 0.0050293 1 54023 77.662 48.936 1 1.8966 1.8742 0 15090000 4472400 10618000 38185 605 14379 14767 59958 59958 VLVTVPLALLQK 12 1 0 Unmodified _VLVTVPLALLQK_ 0 0 0 H0Y6H0;Q8NB78 H0Y6H0 H0Y6H0 KDM1B Lysine-specific histone demethylase 1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.4301 2 647.428856 1292.84316 77676.2 1.2626 0.00081742 0.16477 0.00010667 1.4273 0.00092409 647.429010796921 651.4358735225 123 0.34761 123 122.87 123.21 7.6294E-06 66 24 4 0 0 0 0.0028278 1 81649 57.598 57.598 1 0.78893 0.79869 0 5314100 2915400 2398700 38186 1285 14380 14768 59959 59959 VLVVGAGGIGCELLK 15 1 0 Unmodified _VLVVGAGGIGCELLK_ 0 0 0 B3KMZ6;B2RDF5;Q9UBT2;U3KQ55;K7ES38;K7EPL2 B3KMZ6 B3KMZ6 UBA2 SUMO-activating enzyme subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.4323 2 742.928894 1483.84324 75460.33 0.89397 0.00066415 -0.067586 -5.0211E-05 0.82638 0.00061394 742.929017658651 746.935621007297 109.89 0.18626 109.89 109.78 109.96 7.6294E-06 38 12 5 0 0 0 0.0013515 1 70674 48.004 48.004 1 1.8126 1.8322 0 8675000 4253000 4422000 38187 887 14381 14769 59960 59960 VLVVHDGFEGLAK 13 1 0 Unmodified _VLVVHDGFEGLAK_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;B4E162;A0A0S2Z4A8;Q7KYX9;F8VP00;P78457 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.9261 3 461.925877 1382.7558 90554.16 0.47763 0.00022063 0.37777 0.0001745 0.8554 0.00039513 461.925999412896 464.597398600092 75.317 0.66625 75.317 74.927 75.593 0 194 53 6 0 0 0 0.022181 1 44144 27.005 23.144 1 2.7541 2.8043 0 28033000 8693100 19340000 38188 61 14382 14770 59961 59961 VLVVHDGFEGLAK 13 1 0 Unmodified _VLVVHDGFEGLAK_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;Q96I60;A0A0S2Z4I1;B4E162;A0A0S2Z4A8;Q7KYX9;F8VP00;P78457 A0A024R0Y5 A0A024R0Y5 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.3934 2 692.385177 1382.7558 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.737 1 73.737 73.237 74.237 0 0 0 0 0.015917 1 44293 50.292 36.086 1 38189 61 14382 14770 59962 59962 VLVWDLR 7 0 1 Unmodified _VLVWDLR_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.7728 2 450.76872 899.522887 92819.59 0.19083 8.6018E-05 -0.023581 -1.0629E-05 0.16725 7.5389E-05 450.768670829012 455.7727702633 94.7 0.78922 94.7 94.458 95.248 0 156 69 4 0 0 0 0.026774 3 57554 78.616 43.723 1 0.80246 0.8437 0 11446000 6105600 5340800 38190 600 14383 14771 59963;59964;59965 59963 VLVWDLR 7 0 1 Unmodified _VLVWDLR_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 450.7691 2 450.76872 899.522887 90876.08 0.13069 5.8909E-05 -0.056414 -2.543E-05 0.074271 3.3479E-05 450.768629743497 455.772781278446 93.781 0.60359 93.781 93.504 94.108 0 158 53 5 0 0 0 0.029075 1 58172 70.912 37.174 1 0.88295 0.96714 0 31121000 16289000 14833000 38191 600 14383 14771 59966 59966 VLVYNNTSIVQDEILAHR 18 0 1 Unmodified _VLVYNNTSIVQDEILAHR_ 0 0 0 Q96HT3;O15160;D6RDJ3;H0Y723;B4DEC2;E7EQB9 Q96HT3 Q96HT3 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.0465 3 695.376011 2083.1062 73704.68 0.73559 0.00051151 -0.30269 -0.00021049 0.43289 0.00030102 695.710154489274 698.711830285418 98.892 0.68352 98.892 98.636 99.319 0 173 54 6 0 0 0 1.5364E-06 2 60485 83.758 83.758 1 1.3129 1.3257 0 15483000 8314200 7168300 38192 1376 14384 14772 59967;59968 59967 VLVYNNTSIVQDEILAHR 18 0 1 Unmodified _VLVYNNTSIVQDEILAHR_ 0 0 0 Q96HT3;O15160;D6RDJ3;H0Y723;B4DEC2;E7EQB9 Q96HT3 Q96HT3 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 699.0468 3 695.376011 2083.1062 74221.39 0.82842 0.00057606 0.18655 0.00012972 1.015 0.00070578 695.710467504839 699.04626643887 98.151 0.58963 98.151 97.813 98.403 0 155 52 4 0 0 0 3.2023E-08 2 61311 89.261 89.261 1 1.3457 1.474 0 31811000 15363000 16448000 38193 1376 14384 14772 59969;59970 59969 VLVYNNTSIVQDEILAHR 18 0 1 Unmodified _VLVYNNTSIVQDEILAHR_ 0 0 0 Q96HT3;O15160;D6RDJ3;H0Y723;B4DEC2;E7EQB9 Q96HT3 Q96HT3 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 698.7127 3 695.376011 2083.1062 74778.85 0.74163 0.00051571 -0.10159 -7.0644E-05 0.64004 0.00044507 695.375458822516 699.046730201314 111.48 0.36204 111.48 111.3 111.66 -7.6294E-06 69 17 5 0 0 0 6.479E-05 1 64609 47.916 47.916 1 0.93157 0.78571 0 4731200 1726200 3004900 38194 1376 14384 14772 59971 59971 VLVYNNTSIVQDEILAHR 18 0 1 Unmodified _VLVYNNTSIVQDEILAHR_ 0 0 0 Q96HT3;O15160;D6RDJ3;H0Y723;B4DEC2;E7EQB9 Q96HT3 Q96HT3 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 695.7111 3 695.376011 2083.1062 73131.52 0.58415 0.0004062 -0.1476 -0.00010263 0.43655 0.00030357 695.71039732626 698.712080741369 111.36 0.3826 111.36 111.13 111.51 7.6294E-06 62 17 5 0 0 0 0.00011108 1 63596 44.391 44.391 1 1.062 0.90005 0 4666600 2298000 2368600 38195 1376 14384 14772 59972 59972 VLYAYGYYTGEPSK 14 1 0 Unmodified _VLYAYGYYTGEPSK_ 0 0 0 Q53GB9;A0A024R8Z1;Q5VV89;O14880 Q53GB9 Q53GB9 MGST3 Microsomal glutathione S-transferase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 809.8977 2 805.890489 1609.76642 67816.8 0.65023 0.00052401 0.1579 0.00012725 0.80813 0.00065126 805.890917819627 809.897504331748 76.752 0.8118 76.752 76.421 77.233 0 429 69 9 0 0 0 5.0992E-05 2 45150 109.6 93.345 1 2.4667 2.7902 0 86118000 27009000 59109000 38196 265 14385 14773 59973;59974 59973 VLYAYGYYTGEPSK 14 1 0 Unmodified _VLYAYGYYTGEPSK_ 0 0 0 Q53GB9;A0A024R8Z1;Q5VV89;O14880 Q53GB9 Q53GB9 MGST3 Microsomal glutathione S-transferase 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.3964 2 805.890489 1609.76642 NaN NaN NaN -1.4443 -0.001164 NaN NaN NaN NaN 77.268 0.078903 77.268 77.233 77.312 0 0 0 0 0.0013038 1 45614 72.2 50.114 1 NaN NaN 0 1459800 0 1459800 38197 265 14385 14773 59975 59975 VLYAYGYYTGEPSK 14 1 0 Unmodified _VLYAYGYYTGEPSK_ 0 0 0 Q53GB9;A0A024R8Z1;Q5VV89;O14880 Q53GB9 Q53GB9 MGST3 Microsomal glutathione S-transferase 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 805.8906 2 805.890489 1609.76642 67531.41 0.45905 0.00036995 0.15665 0.00012624 0.6157 0.00049619 806.392406391542 809.897466126565 75.759 0.79418 75.759 75.425 76.219 0 396 73 8 0 0 0 1.0475E-06 2 45607 109.6 109.6 1 2.4089 2.6918 0 93932000 27788000 66144000 38198 265 14385 14773 59976;59977 59977 VLYAYGYYTGEPSK 14 1 0 Unmodified _VLYAYGYYTGEPSK_ 0 0 0 Q53GB9;A0A024R8Z1;Q5VV89;O14880 Q53GB9 Q53GB9 MGST3 Microsomal glutathione S-transferase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 805.8911 2 805.890489 1609.76642 66462.7 0.59664 0.00048082 -0.034728 -2.7987E-05 0.56191 0.00045284 806.392230803443 809.89730630372 87.942 0.72272 87.942 87.632 88.355 0 261 44 8 0 0 0 0.00024871 1 48432 62.408 62.408 1 1.5923 1.2624 0 10286000 4160600 6125600 38199 265 14385 14773 59978 59978 VLYAYGYYTGEPSK 14 1 0 Unmodified _VLYAYGYYTGEPSK_ 0 0 0 Q53GB9;A0A024R8Z1;Q5VV89;O14880 Q53GB9 Q53GB9 MGST3 Microsomal glutathione S-transferase 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.3925 2 805.890489 1609.76642 67561.09 0.51401 0.00041424 -0.034713 -2.7975E-05 0.4793 0.00038626 805.890717464068 810.39874828054 88.011 0.77967 88.011 87.738 88.518 0 254 44 8 0 0 0 0.0002483 2 47588 62.466 62.466 1 1.6919 1.3859 0 8635200 3251300 5383900 38200 265 14385 14773 59979;59980 59980 VLYDAEISQIHQSVTDTNVILSMDNSR 27 0 1 Oxidation (M) _VLYDAEISQIHQSVTDTNVILSM(ox)DNSR_ VLYDAEISQIHQSVTDTNVILSM(1)DNSR VLYDAEISQIHQSVTDTNVILSM(51.96)DNSR 0 1 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1022.5026 3 1022.16791 3063.48189 NaN NaN NaN 0.086331 8.8244E-05 NaN NaN NaN NaN 107.03 0.46998 107.03 106.8 107.27 0 0 0 0 1.9703E-06 1 68170 51.963 45.386 1 NaN NaN 0 37346000 37346000 0 + 38201 1166 14386 14774 59981 59981 888 VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR 33 0 1 Unmodified _VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 855.4456 4 854.942581 3415.74122 63393.85 1.195 0.0010216 -0.006672 -5.7042E-06 1.1883 0.0010159 855.444368109634 857.945673348274 134.2 0.30396 134.2 134.06 134.37 0 124 14 14 0 0 0 3.5889E-26 1 81841 78.909 78.909 1 0.87652 0.76037 0 191540000 96679000 94858000 38202 1506 14387 14775 59982 59982 VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR 33 0 1 Unmodified _VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1140.2577 3 1139.58768 3415.74122 56422.2 0.5588 0.00063681 0.25437 0.00028988 0.81318 0.00092669 1140.25683576774 1143.25805833897 134.19 0.20082 134.19 134.08 134.28 -1.5259E-05 80 9 12 0 0 0 3.985E-19 2 81858 67.913 67.913 1 0.90321 0.76373 0 30450000 16345000 14105000 38203 1506 14387 14775 59983;59984 59984 VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR 33 0 1 Unmodified _VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 855.1946 4 854.942581 3415.74122 64075.32 1.2659 0.0010823 -0.59097 -0.00050525 0.67493 0.00057702 855.44361260993 857.694751491788 134.11 0.33235 134.11 133.95 134.28 0 144 18 15 0 0 0 1.9241E-07 1 80878 45.325 45.325 1 0.88796 0.7756 0 208370000 107430000 100940000 38204 1506 14387 14775 59985 59985 VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR 33 0 1 Unmodified _VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR_ 0 0 0 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1143.2587 3 1139.58768 3415.74122 56453.95 0.73929 0.00084249 -0.6293 -0.00071714 0.10999 0.00012534 1140.25566548398 1143.2576636944 134.11 0.2023 134.11 134.02 134.22 -1.5259E-05 89 11 12 0 0 0 1.5485E-12 1 80921 51.236 51.236 1 0.86736 0.75659 0 33402000 18323000 15079000 38205 1506 14387 14775 59986 59986 VLYLLSQLQQSQMAEK 16 1 0 Oxidation (M) _VLYLLSQLQQSQM(ox)AEK_ VLYLLSQLQQSQM(1)AEK VLYLLSQLQQSQM(138.24)AEK 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 952.0109 2 948.000776 1893.987 62604.22 0.71874 0.00068137 -0.40059 -0.00037976 0.31815 0.00030161 948.501862365307 952.00789300277 107 0.98093 107 106.7 107.68 0 387 74 8 0 0 0 8.6539E-25 3 66448 138.24 138.24 1 0.98272 1.0562 0 38995000 18899000 20096000 38206 1803 14388 14776 59987;59988;59989 59988 1670 VLYLLSQLQQSQMAEK 16 1 0 Oxidation (M) _VLYLLSQLQQSQM(ox)AEK_ VLYLLSQLQQSQM(1)AEK VLYLLSQLQQSQM(138.24)AEK 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 952.5107 2 948.000776 1893.987 62152.3 0.8177 0.00077518 -0.33366 -0.00031631 0.48404 0.00045887 948.000656584353 952.007828329162 106.39 0.72678 106.39 106.05 106.78 -7.6294E-06 346 55 8 0 0 0 8.6539E-25 2 67593 138.24 138.24 1 1.1355 1.2587 0 47330000 21419000 25911000 38207 1803 14388 14776 59990;59991 59991 1670 VLYLLSQLQQSQMAEK 16 1 0 Oxidation (M) _VLYLLSQLQQSQM(ox)AEK_ VLYLLSQLQQSQM(1)AEK VLYLLSQLQQSQM(48.57)AEK 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 952.0073 2 948.000776 1893.987 62290.8 0.54572 0.00051735 -0.30751 -0.00029152 0.23822 0.00022583 948.000370850466 952.007821112428 118.22 0.759 118.22 117.91 118.67 7.6294E-06 186 35 9 0 0 0 0.00031478 1 68752 48.568 48.568 1 0.94713 0.76707 0 13329000 6876800 6452600 38208 1803 14388 14776 59992 59992 1670 VLYLLSQLQQSQMAEK 16 1 0 Unmodified _VLYLLSQLQQSQMAEK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 944.5126 2 940.003319 1877.99208 63639.79 0.8436 0.00079298 -0.13814 -0.00012985 0.70546 0.00066313 940.003790818524 944.01025339893 123.37 0.49977 123.37 123.17 123.67 0 99 20 7 0 0 0 5.3665E-05 2 73729 83.314 83.314 1 1.9804 1.5608 0 5586900 1940400 3646500 38209 1803 14388 14777 59993;59994 59993 VLYLLSQLQQSQMAEK 16 1 0 Unmodified _VLYLLSQLQQSQMAEK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 944.5123 2 940.003319 1877.99208 63925.61 0.86504 0.00081314 -0.93937 -0.00088301 -0.074324 -6.9865E-05 940.503856275271 944.009707016185 123.22 0.51618 123.22 122.97 123.49 -7.6294E-06 103 23 7 0 0 0 5.0005E-05 2 72657 83.617 83.617 1 1.9067 1.5646 0 5164900 1987900 3176900 38210 1803 14388 14777 59995;59996 59995 VLYLPSFFTYAK 12 1 0 Unmodified _VLYLPSFFTYAK_ 0 0 0 A8YXX5;Q9Y374;A4FVA6;A0A024RD08;A0A024RCX4;H0Y8C3;Q8IW90;Q9NZJ7 A8YXX5 A8YXX5 PIG60;MTCH1 Mitochondrial carrier homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.903 2 724.894846 1447.77514 73071.2 0.94518 0.00068516 1.905 0.0013809 2.8502 0.0020661 724.894890629251 728.901733556102 126.06 0.6218 126.06 125.67 126.29 0 192 45 7 0 0 0 0.010797 1 82127 46.158 38.778 1 1.2983 1.3062 0 5279900 2770600 2509300 38211 373 14389 14778 59997 59997 VLYLPSFFTYAK 12 1 0 Unmodified _VLYLPSFFTYAK_ 0 0 0 A8YXX5;Q9Y374;A4FVA6;A0A024RD08;A0A024RCX4;H0Y8C3;Q8IW90;Q9NZJ7 A8YXX5 A8YXX5 PIG60;MTCH1 Mitochondrial carrier homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.9025 2 724.894846 1447.77514 73578.97 0.92473 0.00067033 0.14374 0.0001042 1.0685 0.00077453 725.396705476957 728.901887312906 125.54 0.47117 125.54 125.3 125.77 7.6294E-06 120 31 5 0 0 0 0.0047147 1 83603 52.79 52.79 1 1.4858 1.4922 0 5509800 2212700 3297100 38212 373 14389 14778 59998 59998 VLYVYDMLAGK 11 1 0 Oxidation (M) _VLYVYDM(ox)LAGK_ VLYVYDM(1)LAGK VLYVYDM(62.3)LAGK 0 1 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.3365 2 644.336307 1286.65806 75364.66 0.83999 0.00054124 0.43965 0.00028328 1.2796 0.00082452 644.335740451684 648.344088880579 85.54 1.2775 85.54 84.92 86.198 0 328 106 5 0 0 0 0.0010258 2 51528 62.303 43.523 1 1.2539 1.313 0 30149000 9401100 20748000 38213 876 14390 14779 59999;60000 59999 684 VLYVYDMLAGK 11 1 0 Oxidation (M) _VLYVYDM(ox)LAGK_ VLYVYDM(1)LAGK VLYVYDM(84.21)LAGK 0 1 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.3441 2 644.336307 1286.65806 75071.22 0.73631 0.00047443 -0.04064 -2.6186E-05 0.69567 0.00044825 644.336065232405 648.343441068199 84.681 1.1057 84.681 84.073 85.179 0 348 91 5 0 0 0 0.00017689 2 51964 84.213 62.127 1 1.3475 1.4906 0 45298000 22726000 22571000 38214 876 14390 14779 60001;60002 60001 684 VLYVYDMLAGK 11 1 0 Unmodified _VLYVYDMLAGK_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.3384 2 636.338849 1270.66315 77990.1 0.77226 0.00049142 0.87711 0.00055814 1.6494 0.0010496 636.339427795795 640.346501275394 121.56 0.61647 121.56 121.4 122.02 -7.6294E-06 96 31 4 0 0 0 0.025895 1 72345 40.994 20.665 1 1.3453 1.067 0 4434500 1951400 2483000 38215 876 14390 14780 60003 60003 VLYVYDMLAGK 11 1 0 Unmodified _VLYVYDMLAGK_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.3395 2 636.338849 1270.66315 79029.13 0.81269 0.00051715 0.93877 0.00059737 1.7515 0.0011145 636.339472623453 640.346509552406 121.35 0.55106 121.35 121.21 121.76 0 108 30 5 0 0 0 0.002424 1 71337 61.65 39.564 1 1.2385 1.0013 0 4343500 1770500 2573000 38216 876 14390 14780 60004 60004 VMEGTVAAQDEFYR 14 0 1 Oxidation (M) _VM(ox)EGTVAAQDEFYR_ VM(1)EGTVAAQDEFYR VM(79.82)EGTVAAQDEFYR 0 1 0 B4DMZ0;Q53EL3;B5BU52;B2R6Q4;A8K3B6;P41240;B4DP99 B4DMZ0 B4DMZ0 CSK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase CSK MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.3789 2 816.372137 1630.72972 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.82 1 59.82 59.32 60.32 3.8147E-06 0 0 0 0.00034475 1 34841 79.82 53.147 1 38217 720 14391 14781 60005 60005 555 VMEIVDADEK 10 1 0 Oxidation (M) _VM(ox)EIVDADEK_ VM(1)EIVDADEK VM(71.35)EIVDADEK 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.7834 2 582.776279 1163.538 77254.64 0.79132 0.00046116 -0.94741 -0.00055213 -0.15609 -9.0965E-05 582.776188323972 586.782317191958 33.109 0.72663 33.109 32.755 33.482 3.8147E-06 212 72 5 0 0 0 0.00094113 3 16458 71.349 56.089 1 1.2888 1.3939 0 35726000 14959000 20768000 38218 2148 14392 14782 60006;60007;60008 60008 1989 VMEIVDADEK 10 1 0 Oxidation (M) _VM(ox)EIVDADEK_ VM(1)EIVDADEK VM(79.97)EIVDADEK 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 582.7762 2 582.776279 1163.538 77923.94 0.75595 0.00044055 -0.96087 -0.00055997 -0.20492 -0.00011942 582.776251744847 586.781993977459 32.677 0.72456 32.677 32.265 32.99 0 280 67 6 0 0 0 0.00041929 2 16134 79.974 59.027 1 1.312 1.4437 0 42615000 15326000 27289000 38219 2148 14392 14782 60009;60010 60009 1989 VMEIVDADEK 10 1 0 Oxidation (M) _VM(ox)EIVDADEK_ VM(1)EIVDADEK VM(47.71)EIVDADEK 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.7766 2 582.776279 1163.538 NaN NaN NaN -0.34311 -0.00019996 NaN NaN NaN NaN 38.021 0.57323 38.021 37.658 38.231 0 0 0 0 0.014463 1 17124 47.706 42.616 1 NaN NaN 0 1615400 1615400 0 38220 2148 14392 14782 60011 60011 1989 VMEIVDADEK 10 1 0 Oxidation (M) _VM(ox)EIVDADEK_ VM(1)EIVDADEK VM(51.27)EIVDADEK 0 1 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.7766 2 582.776279 1163.538 NaN NaN NaN 0.044994 2.6221E-05 NaN NaN NaN NaN 38.059 0.59557 38.059 37.813 38.409 0 0 0 0 0.010222 2 16731 51.268 44.544 1 NaN NaN 0 1408000 1408000 0 38221 2148 14392 14782 60012;60013 60012 1989 VMEIVDADEK 10 1 0 Unmodified _VMEIVDADEK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.7793 2 574.778822 1147.54309 NaN NaN NaN -0.86047 -0.00049458 NaN NaN NaN NaN 53.348 0.27565 53.348 53.086 53.361 0 0 0 0 0.0040971 1 29820 73.985 32.956 1 NaN NaN 0 7362500 7362500 0 38222 2148 14392 14783 60014 60014 VMEIVDADEK 10 1 0 Unmodified _VMEIVDADEK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.7789 2 574.778822 1147.54309 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.19 1 52.19 51.69 52.69 -3.8147E-06 0 0 0 0.00054113 1 29710 70.552 36.299 1 38223 2148 14392 14783 60015 60015 VMEIVDADEK 10 1 0 Unmodified _VMEIVDADEK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 574.7789 2 574.778822 1147.54309 78214.01 0.39822 0.00022889 -0.36892 -0.00021205 0.029299 1.684E-05 574.778846506219 578.786824448426 61.156 0.87083 61.156 60.848 61.719 0 266 69 7 0 0 0 0.0059728 1 31257 59.426 55.266 1 0.85623 0.67492 0 5868400 2855700 3012700 38224 2148 14392 14783 60016 60016 VMEIVDADEK 10 1 0 Unmodified _VMEIVDADEK_ 0 0 0 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.7787 2 574.778822 1147.54309 78780.76 0.30989 0.00017812 -0.35009 -0.00020123 -0.040203 -2.3108E-05 574.778827249952 578.786524750604 61.62 0.97697 61.62 61.373 62.35 3.8147E-06 304 74 7 0 0 0 0.0038894 1 30928 62.463 55.34 1 0.88216 0.71597 0 4419100 2192100 2227000 38225 2148 14392 14783 60017 60017 VMENSSGTPDILTR 14 0 1 Oxidation (M) _VM(ox)ENSSGTPDILTR_ VM(1)ENSSGTPDILTR VM(111.52)ENSSGTPDILTR 0 1 0 Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRF8;J3KRJ2 Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 768.8739 2 768.372137 1534.72972 69294.46 0.85467 0.00065671 0.14568 0.00011194 1.0004 0.00076864 768.372018605562 773.376490833637 55.948 0.69225 55.948 55.648 56.341 0 321 54 8 0 0 0 1.9196E-07 3 31374 111.52 88.883 1 1.2445 1.4112 0 107730000 49510000 58224000 38226 1967 14393 14784 60018;60019;60020 60019 1814 VMENSSGTPDILTR 14 0 1 Oxidation (M) _VM(ox)ENSSGTPDILTR_ VM(1)ENSSGTPDILTR VM(192.68)ENSSGTPDILTR 0 1 0 Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRF8;J3KRJ2 Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 768.373 2 768.372137 1534.72972 69247.2 0.55721 0.00042815 -0.031469 -2.418E-05 0.52574 0.00040397 768.372046462766 773.376343427235 55.059 0.71067 55.059 54.706 55.417 -3.8147E-06 352 55 8 0 0 0 1.4937E-57 2 31406 192.68 164.67 1 1.3112 1.4911 0 119170000 53281000 65888000 38227 1967 14393 14784 60021;60022 60022 1814 VMENSSGTPDILTR 14 0 1 Oxidation (M) _VM(ox)ENSSGTPDILTR_ VM(1)ENSSGTPDILTR VM(53.97)ENSSGTPDILTR 0 1 0 Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRF8;J3KRJ2 Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 773.3786 2 768.372137 1534.72972 68344.45 0.55786 0.00042864 -0.13396 -0.00010293 0.4239 0.00032571 768.372100755883 773.376209603284 65.394 0.80235 65.394 65.014 65.817 0 296 59 8 0 0 0 0.00067788 1 32894 53.967 36.531 1 1.3189 1.0989 0 15800000 7285600 8514200 38228 1967 14393 14784 60023 60023 1814 VMENSSGTPDILTR 14 0 1 Unmodified _VMENSSGTPDILTR_ 0 0 0 Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRF8;J3KRJ2 Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 760.3744 2 760.37468 1518.73481 67227.91 0.54599 0.00041516 0.50511 0.00038407 1.0511 0.00079923 760.37479616787 765.37840169253 76.195 0.67279 76.195 75.871 76.544 0 204 49 8 0 0 0 0.00016295 1 40598 74.611 48.672 1 2.4682 2.1234 0 6989100 1884600 5104500 38229 1967 14393 14785 60024 60024 VMENSSGTPDILTR 14 0 1 Unmodified _VMENSSGTPDILTR_ 0 0 0 Q96GD4;J3KTD6;J3QLN8;J3QR41;J3KRF8;J3KRJ2 Q96GD4 Q96GD4 AURKB Aurora kinase B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.3774 2 760.37468 1518.73481 67569.95 0.56585 0.00043026 -0.44695 -0.00033985 0.1189 9.041E-05 760.374946514067 765.378415142942 76.548 0.6119 76.548 76.295 76.907 0 136 43 4 0 0 0 0.00020579 3 39921 68.515 48.754 1 2.4945 2.0778 0 6292200 1829200 4463000 38230 1967 14393 14785 60025;60026;60027 60026 VMEPDPNSENIAAISQSSVGSDLFVFKPSEPR 32 1 1 Oxidation (M) _VM(ox)EPDPNSENIAAISQSSVGSDLFVFKPSEPR_ VM(1)EPDPNSENIAAISQSSVGSDLFVFKPSEPR VM(49.49)EPDPNSENIAAISQSSVGSDLFVFKPSEPR 0 1 1 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1161.9059 3 1155.22771 3462.66131 56144.41 0.20873 0.00024114 0.25166 0.00029072 0.46039 0.00053186 1155.8961183276 1161.90409113116 116.57 0.64917 116.57 116.26 116.9 0 197 45 12 0 0 0 5.3706E-10 1 74418 49.486 49.486 1 1.0396 1.223 0 33783000 14642000 19141000 38231 716 14394 14786 60028 60028 553 VMEPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQK 38 2 1 Oxidation (M) _VM(ox)EPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQK_ VM(1)EPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQK VM(53.29)EPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQK 0 1 2 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1059.0421 4 1052.28205 4205.09908 58499.37 0.65037 0.00068437 -0.42622 -0.00044851 0.22415 0.00023587 1053.03379700782 1059.29238206828 128.07 0.40112 128.07 127.86 128.26 0 122 15 11 0 0 0 7.8631E-14 1 77236 53.288 53.288 1 0.99447 1.0302 0 11488000 5505100 5982800 38232 716 14395 14787 60029 60029 553 VMEPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQK 38 2 1 Oxidation (M) _VM(ox)EPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQK_ VM(1)EPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQK VM(63.76)EPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQK 0 1 2 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1059.293 4 1052.28205 4205.09908 58847.18 0.3784 0.00039818 0.31849 0.00033515 0.69689 0.00073333 1052.78381253658 1059.04171778466 127.81 0.40582 127.81 127.6 128.01 0 87 15 9 0 0 0 6.7276E-21 1 76247 63.761 62.569 1 0.72838 0.70911 0 13357000 6905800 6451500 38233 716 14395 14787 60030 60030 553 VMEPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQK 38 2 1 Unmodified _VMEPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQK_ 0 0 2 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1055.2946 4 1048.28332 4189.10416 58195.15 0.6495 0.00068086 0.79489 0.00083327 1.4444 0.0015141 1048.78517437571 1055.04402558434 129.94 0.36832 129.94 129.72 130.09 1.5259E-05 64 12 9 0 0 0 0.040194 1 77778 7.4351 7.4351 1 1.2199 1.1876 0 4013700 1676000 2337700 38234 716 14395 14788 60031 60031 VMEPLTASR 9 0 1 Oxidation (M) _VM(ox)EPLTASR_ VM(1)EPLTASR VM(54.98)EPLTASR 0 1 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.2684 2 510.263142 1018.51173 82886.48 0.4857 0.00024784 0.43498 0.00022196 0.92068 0.00046979 510.263589144294 515.267371268569 28.98 0.27677 28.98 28.829 29.106 0 56 13 6 0 0 0 0.0073665 1 13814 54.982 37.424 1 1.3718 1.3963 0 27336000 11856000 15480000 38235 493 14396 14789 60032 60032 342 VMEPLTASR 9 0 1 Oxidation (M) _VM(ox)EPLTASR_ VM(1)EPLTASR VM(80.44)EPLTASR 0 1 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.2643 2 510.263142 1018.51173 85922.94 0.41726 0.00021291 1.3406 0.00068404 1.7578 0.00089696 510.263930249617 515.26783483725 28.16 0.39769 28.16 27.947 28.345 0 63 19 5 0 0 0 0.00088164 2 13269 80.438 60.802 1 1.3918 1.5758 0 47867000 19789000 28077000 38236 493 14396 14789 60033;60034 60033 342 VMEPLTASR 9 0 1 Unmodified _VMEPLTASR_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.2706 2 502.265684 1002.51682 85648.39 0.1277 6.4138E-05 -0.75477 -0.00037909 -0.62707 -0.00031496 502.264848588228 507.770991686806 48.358 0.65772 48.358 48.117 48.775 -3.8147E-06 124 51 5 0 0 0 0.046824 1 23717 39.305 35.37 1 1.5233 1.3198 0 1999300 865090 1134200 38237 493 14396 14790 60035 60035 VMEQQSNLQPEAK 13 1 0 Oxidation (M) _VM(ox)EQQSNLQPEAK_ VM(1)EQQSNLQPEAK VM(44.54)EQQSNLQPEAK 0 1 0 B9EGR5;Q8IWI9;B4DVS1;H3BU53 B9EGR5;B4DVS1 B9EGR5 MGA MAX gene-associated protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 759.3672 2 759.366855 1516.71916 NaN NaN NaN NaN NaN NaN NaN NaN NaN 23.395 1 23.395 22.895 23.895 0 0 0 0 0.011819 1 9291 44.543 32.329 1 38238 1121;1042 14397 14791 60036 60036 816 VMFENPDFQVDEESEEFR 18 0 1 Oxidation (M) _VM(ox)FENPDFQVDEESEEFR_ VM(1)FENPDFQVDEESEEFR VM(70.41)FENPDFQVDEESEEFR 0 1 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1137.4857 2 1131.97842 2261.94229 57222.37 -0.066237 -7.4979E-05 0.13077 0.00014803 0.064537 7.3055E-05 1132.48007794863 1136.98283111164 99.563 0.68404 99.563 99.251 99.935 7.6294E-06 385 56 8 0 0 0 1.1473E-05 3 60764 70.412 70.412 1 1.3115 1.3876 0 40995000 17591000 23404000 38239 2000 14398 14792 60037;60038;60039 60038 1840 VMFENPDFQVDEESEEFR 18 0 1 Oxidation (M) _VM(ox)FENPDFQVDEESEEFR_ VM(1)FENPDFQVDEESEEFR VM(98.59)FENPDFQVDEESEEFR 0 1 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1136.9822 2 1131.97842 2261.94229 57708.52 0.21517 0.00024357 0.069041 7.8153E-05 0.28421 0.00032172 1132.47964557155 1137.48395748547 99.047 0.7404 99.047 98.648 99.388 0 378 62 8 0 0 0 6.8475E-09 3 61804 98.592 98.592 1 1.2896 1.4731 0 50298000 25446000 24852000 38240 2000 14398 14792 60040;60041;60042 60040 1840 VMFENPDFQVDEESEEFR 18 0 1 Oxidation (M) _VM(ox)FENPDFQVDEESEEFR_ VM(1)FENPDFQVDEESEEFR VM(41.09)FENPDFQVDEESEEFR 0 1 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1132.4807 2 1131.97842 2261.94229 57267.76 0.31453 0.00035604 -0.027543 -3.1178E-05 0.28699 0.00032487 1131.97828763462 1136.98262911727 112.18 0.54469 112.18 111.94 112.48 0 214 31 9 0 0 0 0.0003712 1 65005 41.092 41.092 1 1.0978 0.90064 0 12319000 5422400 6896400 38241 2000 14398 14792 60043 60043 1840 VMFENPDFQVDEESEEFR 18 0 1 Unmodified _VMFENPDFQVDEESEEFR_ 0 0 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1129.4882 2 1123.98097 2245.94738 58869.25 0.30259 0.0003401 -0.02879 -3.2359E-05 0.2738 0.00030774 1123.98112956543 1128.9847532238 117.93 0.72955 117.93 117.67 118.4 0 139 30 7 0 0 0 0.05497 1 69516 21.353 21.353 1 1.9699 1.6501 0 4004200 1286400 2717800 38242 2000 14398 14793 60044 60044 VMFHSFVSK 9 1 0 Oxidation (M) _VM(ox)FHSFVSK_ VM(1)FHSFVSK VM(48.09)FHSFVSK 0 1 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;H7C446 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 366.5439 3 366.519794 1096.53755 100339.3 0.28108 0.00010302 -0.31482 -0.00011539 -0.033741 -1.2367E-05 366.519625804375 369.190924619676 42.258 0.75671 42.258 41.895 42.651 0 228 66 5 0 0 0 0.0176 1 22731 48.091 48.091 1 1.1224 1.1813 0 23865000 10636000 13228000 38243 493 14399 14794 60045 60045 343 VMGTFSTVTSTVK 13 1 0 Oxidation (M) _VM(ox)GTFSTVTSTVK_ VM(1)GTFSTVTSTVK VM(56.23)GTFSTVTSTVK 0 1 0 Q6IAX9;P08240;A0A024R3M0 Q6IAX9 Q6IAX9 SRPR Signal recognition particle receptor subunit alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 691.36 2 687.352685 1372.69082 NaN NaN NaN -0.91712 -0.00063038 NaN NaN NaN NaN 58.24 0.31082 58.24 58.002 58.312 -3.8147E-06 0 0 0 0.0018161 1 33800 56.225 41.023 1 NaN NaN 0 18876000 0 18876000 38244 1455 14400 14795 60046 60046 1167 VMLLQQGLNDR 11 0 1 Oxidation (M) _VM(ox)LLQQGLNDR_ VM(1)LLQQGLNDR VM(120.12)LLQQGLNDR 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.8492 2 651.845361 1301.67617 74818.7 1.0261 0.00066883 -0.38814 -0.00025301 0.63791 0.00041582 651.845142904327 656.849283786054 65.823 0.78464 65.823 65.37 66.154 0 371 72 7 0 0 0 1.6125E-08 2 37786 120.12 112.47 1 1.0433 1.1978 0 138920000 73356000 65565000 38245 1995 14401 14796 60047;60048 60048 1829 VMLLQQGLNDR 11 0 1 Oxidation (M) _VM(ox)LLQQGLNDR_ VM(1)LLQQGLNDR VM(147.4)LLQQGLNDR 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.349 2 651.845361 1301.67617 75114.52 0.64575 0.00042093 -0.13318 -8.681E-05 0.51257 0.00033412 651.845282617641 656.849490500083 64.634 0.75824 64.634 64.215 64.973 0 352 66 7 0 0 0 3.4954E-13 3 37996 147.4 120.08 1 1.0352 1.1859 0 170240000 87408000 82831000 38246 1995 14401 14796 60049;60050;60051 60051 1829 VMLLQQGLNDR 11 0 1 Oxidation (M) _VM(ox)LLQQGLNDR_ VM(1)LLQQGLNDR VM(105.1)LLQQGLNDR 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.8461 2 651.845361 1301.67617 75169.98 0.73691 0.00048035 -0.17173 -0.00011194 0.56517 0.00036841 651.845330332718 656.849416359937 75.451 0.9106 75.451 75.085 75.995 7.6294E-06 320 64 6 0 0 0 9.4639E-06 1 40024 105.1 81.748 1 1.0964 0.90105 0 17531000 8053200 9477400 38247 1995 14401 14796 60052 60052 1829 VMLLQQGLNDR 11 0 1 Oxidation (M) _VM(ox)LLQQGLNDR_ VM(1)LLQQGLNDR VM(72.24)LLQQGLNDR 0 1 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.8463 2 651.845361 1301.67617 75521.73 0.48913 0.00031884 0.19609 0.00012782 0.68523 0.00044666 651.845565810594 656.849651987261 75.799 0.93588 75.799 75.387 76.323 0 296 65 6 0 0 0 0.00039683 1 39403 72.243 51.543 1 1.0951 0.91223 0 15771000 7709100 8061600 38248 1995 14401 14796 60053 60053 1829 VMLLQQGLNDR 11 0 1 Unmodified _VMLLQQGLNDR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.8489 2 643.847904 1285.68126 NaN NaN NaN -0.85672 -0.0005516 NaN NaN NaN NaN 76.601 0.27261 76.601 76.462 76.735 0 0 0 0 0.00205 1 46210 78.334 56.887 1 NaN NaN 0 4498100 4498100 0 38249 1995 14401 14797 60054 60054 VMLLQQGLNDR 11 0 1 Unmodified _VMLLQQGLNDR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.8529 2 643.847904 1285.68126 74970.09 0.85067 0.00054771 -0.47127 -0.00030343 0.3794 0.00024428 643.847975047 648.851761858341 88.532 0.94279 88.532 88.078 89.02 7.6294E-06 275 59 7 0 0 0 0.00024958 2 48637 90.657 90.657 1 1.6349 1.406 0 6820100 2609400 4210800 38250 1995 14401 14797 60055;60056 60055 VMLLQQGLNDR 11 0 1 Unmodified _VMLLQQGLNDR_ 0 0 0 Q9BPX3;Q6NUR1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.8522 2 643.847904 1285.68126 74475.04 0.48485 0.00031217 0.088131 5.6743E-05 0.57298 0.00036891 643.84832701543 648.852071278433 88.514 0.82622 88.514 88.137 88.963 0 240 48 7 0 0 0 6.8436E-08 2 47874 114.5 100.73 1 1.5711 1.3097 0 6402800 2248500 4154300 38251 1995 14401 14797 60057;60058 60057 VMLYPSR 7 0 1 Oxidation (M) _VM(ox)LYPSR_ VM(1)LYPSR VM(86.09)LYPSR 0 1 0 P18077 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 441.231 2 441.231113 880.447674 88481.77 -0.095449 -4.2115E-05 0.32911 0.00014521 0.23366 0.0001031 441.231153687301 446.235306017274 39.816 1.1479 39.816 39.337 40.485 0 385 97 7 0 0 0 0.013101 2 20614 86.086 29.576 1 1.3833 1.6224 0 217570000 89865000 127700000 38252 1497 14402 14798 60059;60060 60060 1252 VMLYPSR 7 0 1 Oxidation (M) _VM(ox)LYPSR_ VM(1)LYPSR VM(60.76)LYPSR 0 1 0 P18077 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.2359 2 441.231113 880.447674 88876.36 -0.045078 -1.989E-05 0.3283 0.00014486 0.28323 0.00012497 441.231159727476 446.235351407198 38.87 1.113 38.87 38.364 39.477 -3.8147E-06 392 97 7 0 0 0 0.018228 2 20409 60.76 29.47 1 1.3399 1.5547 0 326640000 146400000 180240000 38253 1497 14402 14798 60061;60062 60062 1252 VMMVALGR 8 0 1 2 Oxidation (M) _VM(ox)M(ox)VALGR_ VM(1)M(1)VALGR VM(49.59)M(49.59)VALGR 0 2 0 A0A024RAE1;Q9UKD2;B4DHZ2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 459.7428 2 454.738248 907.461943 NaN NaN NaN 0.057591 2.6189E-05 NaN NaN NaN NaN 32.08 0.50821 32.08 31.771 32.279 0 0 0 0 0.0096358 1 15970 49.59 17.119 1 NaN NaN 0 4784200 0 4784200 38254 302 14403 14799 60063 60063 215;216 VMMVALGR 8 0 1 2 Oxidation (M) _VM(ox)M(ox)VALGR_ VM(1)M(1)VALGR VM(86.09)M(86.09)VALGR 0 2 0 A0A024RAE1;Q9UKD2;B4DHZ2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 459.7423 2 454.738248 907.461943 90832.25 0.30298 0.00013778 0.13538 6.1562E-05 0.43836 0.00019934 454.738265191517 459.74233799752 31.428 0.37048 31.428 31.217 31.588 0 77 31 4 0 0 0 0.0080122 1 15526 86.086 65.566 1 2.6667 2.6653 0 16903000 4927500 11976000 38255 302 14403 14799 60064 60064 215;216 VMTIAPGLFGTPLLTSLPEK 20 1 0 Oxidation (M) _VM(ox)TIAPGLFGTPLLTSLPEK_ VM(1)TIAPGLFGTPLLTSLPEK VM(119.69)TIAPGLFGTPLLTSLPEK 0 1 0 A0A0S2Z410;Q99714 A0A0S2Z410 A0A0S2Z410 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.0927 2 1051.08431 2100.15406 59411.05 0.64254 0.00067536 0.41351 0.00043464 1.0561 0.00111 1051.08421799438 1055.59313250736 130.39 0.83212 130.39 129.86 130.69 0 287 50 9 0 0 0 5.347E-18 3 85073 119.69 113.85 1 3.558 3.517 0 25687000 7091100 18596000 38256 555 14404 14800 60065;60066;60067 60067 412 VMTVSFHK 8 1 0 Oxidation (M) _VM(ox)TVSFHK_ VM(1)TVSFHK VM(112.17)TVSFHK 0 1 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;B7Z3S4;E7ESJ6;O15379;Q92769;B3KUJ5 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC3;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 3;Histone deacetylase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.7498 2 482.74967 963.484787 84742.68 -0.0066441 -3.2074E-06 -0.66666 -0.00032183 -0.6733 -0.00032504 482.750280968055 486.757505398271 24.177 0.60444 24.177 23.817 24.422 -1.9073E-06 81 23 7 0 0 0 0.00053116 1 9986 112.17 66.453 1 1.5635 1.7316 0 46309000 17340000 28970000 38257 1715;1952 14405 14801 60068 60068 1551 VMTVSFHK 8 1 0 Oxidation (M) _VM(ox)TVSFHK_ VM(1)TVSFHK VM(41.43)TVSFHK 0 1 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;B7Z3S4;E7ESJ6;O15379;Q92769;B3KUJ5 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC3;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 3;Histone deacetylase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 482.7496 2 482.74967 963.484787 86925.47 0.026847 1.2961E-05 -0.054052 -2.6094E-05 -0.027205 -1.3133E-05 482.749314062004 486.756764933671 26.816 0.53219 26.816 26.636 27.168 1.9073E-06 78 25 6 0 0 0 0.027305 1 9785 41.429 19.298 1 0.94155 0.74162 0 3253700 1720700 1533000 38258 1715;1952 14405 14801 60069 60069 1551 VMTVSFHK 8 1 0 Unmodified _VMTVSFHK_ 0 0 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;B7Z3S4;E7ESJ6;O15379;Q92769;B3KUJ5 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC3;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 3;Histone deacetylase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.7593 2 474.752213 947.489873 87453.55 0.11028 5.2356E-05 0.40013 0.00018996 0.51042 0.00024232 474.752277800779 478.759344681042 41.695 0.4641 41.695 41.492 41.956 0 132 36 6 0 0 0 0.013465 1 19353 65.252 33.317 1 1.8425 1.4604 0 4757200 1514900 3242300 38259 1715;1952 14405 14802 60070 60070 VMTVSFHK 8 1 0 Unmodified _VMTVSFHK_ 0 0 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;B7Z3S4;E7ESJ6;O15379;Q92769;B3KUJ5 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC3;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 3;Histone deacetylase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.7594 2 474.752213 947.489873 87099.16 0.029363 1.394E-05 0.12876 6.1128E-05 0.15812 7.5069E-05 474.752274700405 478.759156430433 41.616 0.42631 41.616 41.418 41.844 0 122 30 5 0 0 0 0.024726 1 18731 55.676 30.226 1 1.6396 1.282 0 3705500 1349500 2356000 38260 1715;1952 14405 14802 60071 60071 VMVAPISGSVTTGTK 15 1 0 Oxidation (M) _VM(ox)VAPISGSVTTGTK_ VM(1)VAPISGSVTTGTK VM(57.17)VAPISGSVTTGTK 0 1 0 E7ETD6;Q12830;F5GXF5;J3QQK4 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 736.4016 2 732.392341 1462.77013 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.269 1 61.269 60.769 61.769 0 0 0 0 0.00063399 1 35041 57.175 35.182 1 38261 1224 14406 14803 60072 60072 934 VMVAPISGSVTTGTK 15 1 0 Oxidation (M) _VM(ox)VAPISGSVTTGTK_ VM(1)VAPISGSVTTGTK VM(48)VAPISGSVTTGTK 0 1 0 E7ETD6;Q12830;F5GXF5;J3QQK4 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.4003 2 732.392341 1462.77013 70567.13 0.43536 0.00031885 0.75853 0.00055554 1.1939 0.0008744 732.392955961059 736.399839067194 60.394 0.65381 60.394 59.896 60.55 0 77 41 4 0 0 0 0.00065477 1 35374 48.004 48.004 1 0.68206 0.7202 0 20037000 10019000 10018000 38262 1224 14406 14803 60073 60073 934 VMVELLGSYTEDNASQAR 18 0 1 Oxidation (M) _VM(ox)VELLGSYTEDNASQAR_ VM(1)VELLGSYTEDNASQAR VM(72.5)VELLGSYTEDNASQAR 0 1 0 Q7L2H7;J3KNJ2;H0YCQ8;E9PRY0 Q7L2H7 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1004.9824 2 999.975486 1997.93642 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.666 1 87.666 87.166 88.166 0 0 0 0 1.1983E-05 1 54041 72.496 50.623 1 38263 1872 14407 14804 60074 60074 1723 VMVQPINLIFR 11 0 1 Oxidation (M) _VM(ox)VQPINLIFR_ VM(1)VQPINLIFR VM(40.07)VQPINLIFR 0 1 0 P62304 P62304 P62304 SNRPE Small nuclear ribonucleoprotein E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.8928 2 673.386665 1344.75878 74704.78 0.95177 0.00064091 -0.13206 -8.8925E-05 0.81971 0.00055198 673.386424667694 678.391359290282 127.96 0.64291 127.96 127.7 128.35 0 107 25 7 0 0 0 0.013425 1 77211 40.067 40.067 1 0.68687 0.57536 0 4006800 2310800 1696000 38264 1642 14408 14805 60075 60075 1422 VMVQPINLIFR 11 0 1 Oxidation (M) _VM(ox)VQPINLIFR_ VM(1)VQPINLIFR VM(40.35)VQPINLIFR 0 1 0 P62304 P62304 P62304 SNRPE Small nuclear ribonucleoprotein E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.8888 2 673.386665 1344.75878 74659.71 0.7421 0.00049972 0.005303 3.571E-06 0.74741 0.00050329 673.386780565719 678.390727500335 127.65 0.56038 127.65 127.4 127.96 0 95 22 6 0 0 0 0.013155 1 76014 40.352 40.352 1 0.66802 0.59016 0 4084900 2356300 1728600 38265 1642 14408 14805 60076 60076 1422 VNAAFAAR 8 0 1 Unmodified _VNAAFAAR_ 0 0 0 Q8N9T8;B4DUT2;B4DUY9;H0YFD2;H0YH26;H0YG91 Q8N9T8 Q8N9T8 KRI1 Protein KRI1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 410.2271 2 410.22722 818.439886 95147.66 0.22664 9.2972E-05 0.9836 0.0004035 1.2102 0.00049647 410.227299937051 415.231722385907 28.963 0.30408 28.963 28.719 29.023 0 54 15 7 0 0 0 0.0013709 1 13811 109.63 78.05 1 0.82577 0.8448 0 32101000 18798000 13303000 38266 1916 14409 14806 60077 60077 VNAAFAAR 8 0 1 Unmodified _VNAAFAAR_ 0 0 0 Q8N9T8;B4DUT2;B4DUY9;H0YFD2;H0YH26;H0YG91 Q8N9T8 Q8N9T8 KRI1 Protein KRI1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.2268 2 410.22722 818.439886 NaN NaN NaN 0.32625 0.00013384 NaN NaN NaN NaN 28.216 0.19156 28.216 28.095 28.286 0 0 0 0 0.0031028 1 13404 102.8 66.995 1 NaN NaN 0 24358000 24358000 0 38267 1916 14409 14806 60078 60078 VNALLPTETFIPVIR 15 0 1 Unmodified _VNALLPTETFIPVIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 847.5015 2 841.995623 1681.97669 66659.3 0.92237 0.00077663 0.10476 8.821E-05 1.0271 0.00086484 841.995803059053 846.999718634077 127.92 0.63218 127.92 127.65 128.28 7.6294E-06 266 39 10 0 0 0 2.2506E-10 2 83272 119.45 119.45 1 0.91215 1.0472 0 138770000 72422000 66353000 38268 897 14410 14807 60079;60080 60080 VNALLPTETFIPVIR 15 0 1 Unmodified _VNALLPTETFIPVIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.9997 2 841.995623 1681.97669 66764.76 0.90526 0.00076223 -0.21477 -0.00018083 0.6905 0.0005814 841.995527775234 846.999428559252 127.54 0.52303 127.54 127.28 127.81 0 248 31 11 0 0 0 5.2096E-08 2 85070 111.63 111.63 1 0.94665 1.0825 0 157200000 81797000 75403000 38269 897 14410 14807 60081;60082 60082 VNATGPQFVSGVIVK 15 1 0 Unmodified _VNATGPQFVSGVIVK_ 0 0 0 Q4G0J3;H0YA82;D6R9Z6;A0A024RDH5 Q4G0J3 Q4G0J3 LARP7;HDCMA18P La-related protein 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 758.4311 2 758.430116 1514.84568 70096.44 0.67716 0.00051358 0.022952 1.7407E-05 0.70011 0.00053098 758.430276478566 762.437320715918 105.3 0.89688 105.3 104.94 105.83 -7.6294E-06 162 57 6 0 0 0 0.0040006 2 60027 40.475 27.708 1 1.4041 1.1052 0 4014100 1911700 2102400 38270 1779 14411 14808 60083;60084 60084 VNCIQWHQDSGCLYSCSDDK 20 1 0 Unmodified _VNCIQWHQDSGCLYSCSDDK_ 0 0 0 Q15061;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.6712 3 824.671952 2470.99403 70124.76 0.65618 0.00054113 -0.26799 -0.000221 0.38819 0.00032013 825.005685035804 828.011089545424 62.949 0.39819 62.949 62.709 63.107 0 111 37 5 0 0 0 2.9153E-07 1 36079 78.794 78.409 1 0.83345 0.87083 0 11884000 6121500 5762200 38271 1752 14412 14809 60085 60085 VNCIQWHQDSGCLYSCSDDK 20 1 0 Unmodified _VNCIQWHQDSGCLYSCSDDK_ 0 0 0 Q15061;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 825.007 3 824.671952 2470.99403 67913.52 0.76935 0.00063446 0.019335 1.5945E-05 0.78868 0.0006504 825.006077076699 827.344391371491 61.646 0.40558 61.646 61.414 61.819 0 191 37 7 0 0 0 8.6956E-07 3 36078 64.203 64.202 1 0.95613 0.99036 0 18711000 8686500 10024000 38272 1752 14412 14809 60086;60087;60088 60088 VNCIQWHQDSGCLYSCSDDK 20 1 0 Unmodified _VNCIQWHQDSGCLYSCSDDK_ 0 0 0 Q15061;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 825.0069 3 824.671952 2470.99403 66176.56 0.75101 0.00061934 -0.14588 -0.00012031 0.60512 0.00049903 825.006427761634 827.677779926449 72.807 0.57473 72.807 72.542 73.117 -7.6294E-06 299 38 10 0 0 0 4.2926E-07 2 38413 74.698 74.698 1 1.1156 0.86656 0 12661000 6239900 6420900 38273 1752 14412 14809 60089;60090 60090 VNCIQWHQDSGCLYSCSDDK 20 1 0 Unmodified _VNCIQWHQDSGCLYSCSDDK_ 0 0 0 Q15061;C9JEE7 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 824.6721 3 824.671952 2470.99403 67087.62 0.70034 0.00057755 -0.07189 -5.9285E-05 0.62845 0.00051827 825.006050839689 827.346035986738 73.337 1.0255 73.337 72.665 73.69 -7.6294E-06 324 75 10 0 0 0 6.0379E-07 2 37947 70.538 70.538 1 1.2071 0.99188 0 9638200 4965500 4672700 38274 1752 14412 14809 60091;60092 60091 VNCSFYFK 8 1 0 Unmodified _VNCSFYFK_ 0 0 0 P0DN76;Q01081;B5BU08;A0A1B0GW87;M0QYK5;Q69YM7;M0R2N4;Q8WU68 P0DN76 P0DN76 U2AF1;U2AF1L4;DKFZp313J1712 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.7543 2 532.747127 1063.4797 85403.22 0.47292 0.00025195 0.071504 3.8093E-05 0.54442 0.00029004 532.747648091175 536.753974096259 62.166 0.97516 62.166 61.872 62.847 3.8147E-06 247 90 4 0 0 0 0.040852 1 36660 47.082 47.082 1 1.0964 1.097 0 15488000 7312900 8174700 38275 1463 14413 14810 60093 60093 VNCSFYFK 8 1 0 Unmodified _VNCSFYFK_ 0 0 0 P0DN76;Q01081;B5BU08;A0A1B0GW87;M0QYK5;Q69YM7;M0R2N4;Q8WU68 P0DN76 P0DN76 U2AF1;U2AF1L4;DKFZp313J1712 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.7474 2 532.747127 1063.4797 NaN NaN NaN -0.82951 -0.00044192 NaN NaN NaN NaN 73.289 0.62509 73.29 72.996 73.621 7.6294E-06 0 0 0 0.048057 1 38735 50.703 37.666 1 NaN NaN 0 2687700 2687700 0 38276 1463 14413 14810 60094 60094 VNDFETADILCPK 13 1 0 Unmodified _VNDFETADILCPK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4;B1AQT4;E9PP32;E9PKH1;B1AQT3 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 765.3741 2 761.366324 1520.71809 NaN NaN NaN -0.21489 -0.00016361 NaN NaN NaN NaN 106.37 0.56457 106.37 106.11 106.67 0 0 0 0 0.0028453 1 59958 67.385 60.532 1 NaN NaN 0 2653800 0 2653800 38277 264 14414 14811 60095 60095 VNDFLAEIFK 10 1 0 Unmodified _VNDFLAEIFK_ 0 0 0 Q14008;Q8IYN5;H0YDX5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3296 2 598.321514 1194.62847 80010.14 0.80782 0.00048333 0.22446 0.0001343 1.0323 0.00061763 598.321539967279 602.328644388522 124.13 0.59367 124.13 123.83 124.43 0 174 40 6 0 0 0 0.00069328 2 80569 82.749 71.92 1 1.2669 1.2795 0 6972000 3139500 3832600 38278 1725 14415 14812 60096;60097 60097 VNDFLAEIFK 10 1 0 Unmodified _VNDFLAEIFK_ 0 0 0 Q14008;Q8IYN5;H0YDX5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.3292 2 598.321514 1194.62847 79852.05 0.80898 0.00048403 0.28621 0.00017125 1.0952 0.00065528 598.321522216272 602.328800547602 123.58 0.614 123.58 123.3 123.91 0 174 43 6 0 0 0 0.000817 2 82170 80.755 69.392 1 1.2666 1.2801 0 8636400 3876900 4759500 38279 1725 14415 14812 60098;60099 60099 VNDSDDLIMTENEVGK 16 1 0 Oxidation (M) _VNDSDDLIM(ox)TENEVGK_ VNDSDDLIM(1)TENEVGK VNDSDDLIM(61.11)TENEVGK 0 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 901.9147 2 897.906738 1793.79892 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.475 1 63.475 62.975 63.975 0 0 0 0 0.00038042 1 37320 61.11 55.265 1 38280 2002 14416 14813 60100 60100 1844 VNDTIQIDLETGK 13 1 0 Unmodified _VNDTIQIDLETGK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8799 2 723.377746 1444.74094 70726.82 0.86102 0.00062284 0.18279 0.00013223 1.0438 0.00075507 723.37782153679 727.384948638104 82.534 0.77867 82.534 82.233 83.012 0 385 64 10 0 0 0 2.7696E-13 2 49178 126.12 126.12 1 1.0857 1.2832 0 394230000 173900000 220340000 38281 824 14417 14814 60101;60102 60102 VNDTIQIDLETGK 13 1 0 Unmodified _VNDTIQIDLETGK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.378 2 723.377746 1444.74094 70717.88 0.96261 0.00069633 0.17607 0.00012737 1.1387 0.0008237 723.377811106864 727.384938806515 81.657 0.88689 81.657 81.216 82.103 0 441 76 11 0 0 0 9.0875E-10 2 49704 124.39 124.39 1 1.0929 1.2866 0 442650000 221420000 221220000 38282 824 14417 14814 60103;60104 60104 VNDTIQIDLETGK 13 1 0 Unmodified _VNDTIQIDLETGK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.3778 2 723.377746 1444.74094 71646.82 0.80216 0.00058027 -0.50622 -0.00036619 0.29594 0.00021408 723.377341601266 727.384515883589 94.401 1.1797 94.401 94.087 95.266 -7.6294E-06 492 78 13 0 0 0 4.5273E-30 2 52758 164.9 164.9 1 1.0477 0.91267 0 155510000 72636000 82874000 38283 824 14417 14814 60105;60106 60106 VNDTIQIDLETGK 13 1 0 Unmodified _VNDTIQIDLETGK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.8806 2 723.377746 1444.74094 71352.45 0.77212 0.00055853 -0.18689 -0.00013519 0.58523 0.00042334 723.377615137452 727.384752891476 94.433 1.1359 94.433 93.934 95.07 7.6294E-06 444 71 11 0 0 0 7.3308E-06 2 51880 103.44 103.44 1 1.0235 0.87532 0 113220000 55667000 57551000 38284 824 14417 14814 60107;60108 60108 VNEISVEVDSDPR 13 0 1 Unmodified _VNEISVEVDSDPR_ 0 0 0 Q53SY7;F8VPD4;P27708;H7C2E4 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.8613 2 729.857177 1457.6998 70414 0.33271 0.00024283 -0.77115 -0.00056283 -0.43844 -0.00032 729.857016039977 734.860422255566 62.122 0.61891 62.122 61.794 62.413 0 128 51 4 0 0 0 0.00027041 2 35637 67.08 65.5 1 0.83958 0.88 0 12356000 6749000 5606600 38285 1259 14418 14815 60109;60110 60109 VNEISVEVDSDPR 13 0 1 Unmodified _VNEISVEVDSDPR_ 0 0 0 Q53SY7;F8VPD4;P27708;H7C2E4 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.8581 2 729.857177 1457.6998 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.012 1 61.012 60.512 61.512 0 0 0 0 0.0015128 1 35731 72.531 55.86 1 38286 1259 14418 14815 60111 60111 VNEISVEVDSDPR 13 0 1 Unmodified _VNEISVEVDSDPR_ 0 0 0 Q53SY7;F8VPD4;P27708;H7C2E4 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.8578 2 729.857177 1457.6998 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.074 1 61.074 60.574 61.574 0 0 0 0 0.0016579 1 35769 70.942 48.949 1 38287 1259 14418 14815 60112 60112 VNEISVEVDSDPR 13 0 1 Unmodified _VNEISVEVDSDPR_ 0 0 0 Q53SY7;F8VPD4;P27708;H7C2E4 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 729.8578 2 729.857177 1457.6998 74084.39 0.473 0.00034522 -0.6169 -0.00045025 -0.1439 -0.00010502 729.857016474225 734.859815392792 71.792 0.40005 71.792 71.571 71.971 0 74 30 4 0 0 0 0.012258 1 37912 39.625 35.608 1 0.78583 0.68195 0 2422900 1453100 969790 38288 1259 14418 14815 60113 60113 VNEVLNR 7 0 1 Unmodified _VNEVLNR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 422.2376 2 422.237784 842.461016 93222.9 0.24612 0.00010392 -0.0069536 -2.9361E-06 0.23916 0.00010098 422.237603198744 427.241878136191 24.229 0.51235 24.229 23.995 24.508 -1.9073E-06 95 21 9 0 0 0 4.8827E-17 2 9983 175.93 96.48 1 1.1984 1.3534 0 101390000 49222000 52171000 38289 1183 14419 14816 60114;60115 60115 VNEVLNR 7 0 1 Unmodified _VNEVLNR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 427.2419 2 422.237784 842.461016 91152.41 -0.39321 -0.00016603 -1.1051 -0.00046663 -1.4983 -0.00063266 422.238011371458 427.242192809826 26.41 0.66668 26.41 26.211 26.878 1.9073E-06 138 29 9 0 0 0 0.026488 2 9929 88.029 51.843 1 1.9374 1.626 0 10016000 3269600 6746400 38290 1183 14419 14816 60116;60117 60116 VNFDDYTVNLGGLK 14 1 0 Unmodified _VNFDDYTVNLGGLK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.8924 2 777.893563 1553.77257 70375.77 1.0268 0.0007987 0.2771 0.00021556 1.3039 0.0010143 777.89323867102 781.901082720893 108.39 0.56178 108.39 108.14 108.7 0 202 42 7 0 0 0 4.0499E-06 2 67674 100.72 100.72 1 2.8351 3.0085 0 31492000 7550200 23941000 38291 1688 14420 14817 60118;60119 60119 VNFDDYTVNLGGLK 14 1 0 Unmodified _VNFDDYTVNLGGLK_ 0 0 0 Q06210 Q06210 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 781.9025 2 777.893563 1553.77257 71129.23 0.70882 0.00055138 0.4397 0.00034204 1.1485 0.00089342 778.394764431948 781.90151295648 119.47 0.47365 119.47 119.32 119.79 0 95 22 6 0 0 0 0.0015233 3 69843 53.08 44.668 1 0.97055 0.78997 0 4554200 2339600 2214700 38292 1688 14420 14817 60120;60121;60122 60121 VNFLPEIITLSK 12 1 0 Unmodified _VNFLPEIITLSK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.4061 2 687.405578 1372.7966 75164.76 0.94179 0.00064739 -0.2729 -0.00018759 0.6689 0.0004598 687.405380329041 691.412339611354 124.68 0.46944 124.68 124.44 124.91 -7.6294E-06 135 32 6 0 0 0 0.010019 2 80952 46.706 46.706 1 2.1145 2.0972 0 8196400 2823400 5373000 38293 1729 14421 14818 60123;60124 60124 VNFPENGFLSPDK 13 1 0 Unmodified _VNFPENGFLSPDK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.3643 2 732.361899 1462.70924 71576.23 0.72393 0.00053018 0.39367 0.00028831 1.1176 0.00081848 732.362022054846 736.369618784247 94.458 0.63443 94.458 94.186 94.821 0 195 57 5 0 0 0 0.00028723 2 57361 66.262 66.262 1 1.2741 1.3248 0 29603000 13663000 15940000 38294 1535 14422 14819 60125;60126 60125 VNFPENGFLSPDK 13 1 0 Unmodified _VNFPENGFLSPDK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 736.3696 2 732.361899 1462.70924 71166.08 0.63877 0.00046781 0.070546 5.1665E-05 0.70931 0.00051948 732.362320555576 736.369405695785 93.685 0.76238 93.685 93.371 94.133 0 258 67 6 0 0 0 0.0010854 2 58153 59.265 53.707 1 1.1328 1.2488 0 43557000 19392000 24164000 38295 1535 14422 14819 60127;60128 60128 VNFPENGFLSPDK 13 1 0 Unmodified _VNFPENGFLSPDK_ 0 0 0 P31689;B7Z5C0;Q9NXZ8 P31689 P31689 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.3618 2 732.361899 1462.70924 70722.7 0.75323 0.00055163 -0.13417 -9.8259E-05 0.61906 0.00045338 732.361490542611 736.369211714734 107.57 0.57768 107.57 107.33 107.91 0 125 32 5 0 0 0 0.0001783 1 61634 71.555 67.91 1 0.8509 0.67409 0 4893200 2214100 2679100 38296 1535 14422 14819 60129 60129 VNFTVDQIR 9 0 1 Unmodified _VNFTVDQIR_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 551.3 2 546.29583 1090.57711 82880.26 0.55731 0.00030446 0.25535 0.00013949 0.81266 0.00044395 546.295611212733 551.300046047322 72.167 1.0958 72.167 71.641 72.737 0 392 85 7 0 0 0 0.00034716 3 42473 101.25 72.103 1 3.3764 3.7298 0 56081000 12672000 43408000 38297 1478 14423 14820 60130;60131;60132 60132 VNFTVDQIR 9 0 1 Unmodified _VNFTVDQIR_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 551.3003 2 546.29583 1090.57711 82374.25 0.50879 0.00027795 0.1331 7.2715E-05 0.64189 0.00035066 546.295549166759 551.299983318842 70.844 0.98748 70.844 70.418 71.406 0 358 74 6 0 0 0 0.0010227 3 42200 91.069 68.577 1 3.4303 3.9759 0 66079000 14361000 51718000 38298 1478 14423 14820 60133;60134;60135 60134 VNFTVDQIR 9 0 1 Unmodified _VNFTVDQIR_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.2997 2 546.29583 1090.57711 81548.95 0.43953 0.00024011 0.33291 0.00018187 0.77244 0.00042198 546.295552673563 551.300116392264 82.511 0.97899 82.511 82.1 83.079 0 254 58 6 0 0 0 0.053875 1 44706 36.772 27.558 1 2.2466 1.9308 0 6511700 1936100 4575600 38299 1478 14423 14820 60136 60136 VNFTVDQIR 9 0 1 Unmodified _VNFTVDQIR_ 0 0 0 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.3015 2 546.29583 1090.57711 82178.95 0.44584 0.00024356 -0.062462 -3.4123E-05 0.38338 0.00020944 546.295548285732 551.299940872461 82.704 1.0993 82.704 82.244 83.344 0 249 63 6 0 0 0 0.027124 1 43921 47.187 30.647 1 2.3015 1.9095 0 5225000 1439900 3785100 38300 1478 14423 14820 60137 60137 VNGRPLEMIEPR 12 0 2 Oxidation (M) _VNGRPLEM(ox)IEPR_ VNGRPLEM(1)IEPR VNGRPLEM(51.73)IEPR 0 1 1 P62249;M0R3H0;M0R1M5;Q6IPX4 P62249 P62249 RPS16 40S ribosomal protein S16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.2537 3 476.253887 1425.73983 86311.66 0.28624 0.00013632 0.3096 0.00014745 0.59584 0.00028377 476.253819873101 482.926279737491 41.782 0.65579 41.782 41.522 42.178 0 274 52 7 0 0 0 0.0012872 1 22055 51.726 51.726 1 1.3349 1.4528 0 64902000 27787000 37115000 38301 1636 14424 14821 60138 60138 1416 VNGSEQTVVAFFIMPAR 17 0 1 Oxidation (M) _VNGSEQTVVAFFIM(ox)PAR_ VNGSEQTVVAFFIM(1)PAR VNGSEQTVVAFFIM(44.62)PAR 0 1 0 P13807;Q53ER0;A8K6K7;B7Z806;B7Z6I6 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 941.9811 2 941.480011 1880.94547 NaN NaN NaN -0.48923 -0.0004606 NaN NaN NaN NaN 131.05 0.73157 131.05 130.7 131.43 0 0 0 0 0.0027986 1 79534 44.616 39.009 1 NaN NaN 0 2634000 2634000 0 38302 1479 14425 14822 60139 60139 1236 VNIFGVESGKK 11 2 0 Unmodified _VNIFGVESGKK_ 0 0 1 H0YN81;Q9GZS3;H0YMF9;H0YL19 H0YN81 H0YN81 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.3468 2 589.332413 1176.65027 80094.94 0.39802 0.00023456 0.26759 0.0001577 0.66561 0.00039226 589.332417636634 597.346614578788 59.819 0.47383 59.819 59.597 60.071 -3.8147E-06 91 31 4 0 0 0 0.042039 1 30530 41.399 38.144 1 1.7486 1.55 0 2296500 897740 1398800 38303 1299 14426 14823 60140 60140 VNIISVTNK 9 1 0 Unmodified _VNIISVTNK_ 0 0 0 Q9BY44;C9IZE1;H7C5Q3 Q9BY44 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.3032 2 494.295299 986.576045 NaN NaN NaN 0.21407 0.00010581 NaN NaN NaN NaN 57.076 0.43947 57.076 56.913 57.353 0 0 0 0 0.027074 1 32122 54.416 32.33 1 NaN NaN 0 5063000 0 5063000 38304 2017 14427 14824 60141 60141 VNIISVTNK 9 1 0 Unmodified _VNIISVTNK_ 0 0 0 Q9BY44;C9IZE1;H7C5Q3 Q9BY44 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.2944 2 494.295299 986.576045 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.123 1 57.123 56.623 57.623 0 0 0 0 0.012858 1 32203 60.892 26.889 1 38305 2017 14427 14824 60142 60142 VNIISVTNK 9 1 0 Unmodified _VNIISVTNK_ 0 0 0 Q9BY44;C9IZE1;H7C5Q3 Q9BY44 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.3025 2 494.295299 986.576045 88260.96 0.046709 2.3088E-05 0.52362 0.00025882 0.57032 0.00028191 494.295437706115 498.302642163637 56.044 0.48865 56.044 55.796 56.284 0 116 40 4 0 0 0 0.0056175 1 32164 66.27 40.711 1 2.3332 2.3986 0 11670000 3451700 8217800 38306 2017 14427 14824 60143 60143 VNILEVASGAVLR 13 0 1 Unmodified _VNILEVASGAVLR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.9032 2 670.898451 1339.78235 74547.62 0.82773 0.00055532 -0.088346 -5.9272E-05 0.73939 0.00049605 670.898335364366 675.902460269727 119.8 0.86974 119.8 119.46 120.33 0 355 59 8 0 0 0 2.8628E-13 2 77065 125.72 104.35 1 0.89815 1.0258 0 123720000 63229000 60495000 38307 1698 14428 14825 60144;60145 60145 VNILEVASGAVLR 13 0 1 Unmodified _VNILEVASGAVLR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8989 2 670.898451 1339.78235 74148 0.81606 0.00054749 -0.30297 -0.00020326 0.51309 0.00034423 670.898160189374 675.902375869579 119.22 0.95488 119.22 118.89 119.85 0 363 67 9 0 0 0 1.822E-13 2 78434 130.16 101.37 1 0.89167 1.0257 0 207080000 111970000 95109000 38308 1698 14428 14825 60146;60147 60147 VNILEVASGAVLR 13 0 1 Unmodified _VNILEVASGAVLR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.9036 2 670.898451 1339.78235 73425.49 1.0689 0.00071711 -0.11062 -7.4213E-05 0.95826 0.0006429 670.89843258528 675.902431849751 132.44 0.74701 132.44 132.14 132.89 1.5259E-05 205 33 10 0 0 0 9.6148E-06 2 80437 100.55 75.699 1 1.2113 1.0416 0 46423000 20964000 25459000 38309 1698 14428 14825 60148;60149 60149 VNILEVASGAVLR 13 0 1 Unmodified _VNILEVASGAVLR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.8993 2 670.898451 1339.78235 73680.22 1.1197 0.00075121 0.103 6.9103E-05 1.2227 0.00082031 670.898549412013 675.902572929423 132.13 0.77641 132.13 131.87 132.65 0 192 34 10 0 0 0 2.1009E-13 2 79328 128.97 98.361 1 1.2676 1.1058 0 48168000 22673000 25495000 38310 1698 14428 14825 60150;60151 60151 VNIVFNYDMPEDSDTYLHR 19 0 1 Oxidation (M) _VNIVFNYDM(ox)PEDSDTYLHR_ VNIVFNYDM(1)PEDSDTYLHR VNIVFNYDM(66.15)PEDSDTYLHR 0 1 0 O00148;B4DX78;Q69YT6 O00148 O00148 DDX39A;DKFZp547B159 ATP-dependent RNA helicase DDX39A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 785.3604 3 782.023197 2343.04776 NaN NaN NaN -0.23075 -0.00018045 NaN NaN NaN NaN 94.934 0.53598 94.934 94.631 95.167 0 0 0 0 6.6965E-05 1 57672 66.152 58.255 1 NaN NaN 0 11697000 0 11697000 38311 1359 14429 14826 60152 60152 1028 VNIVFNYDMPEDSDTYLHR 19 0 1 Oxidation (M) _VNIVFNYDM(ox)PEDSDTYLHR_ VNIVFNYDM(1)PEDSDTYLHR VNIVFNYDM(73.78)PEDSDTYLHR 0 1 0 O00148;B4DX78;Q69YT6 O00148 O00148 DDX39A;DKFZp547B159 ATP-dependent RNA helicase DDX39A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 785.6938 3 782.023197 2343.04776 NaN NaN NaN -0.13986 -0.00010938 NaN NaN NaN NaN 94.037 0.58237 94.037 93.803 94.385 7.6294E-06 0 0 0 3.2125E-06 1 58465 73.783 69.515 1 NaN NaN 0 22577000 0 22577000 38312 1359 14429 14826 60153 60153 1028 VNLAELFK 8 1 0 Unmodified _VNLAELFK_ 0 0 0 V9HW35;P30044 V9HW35 V9HW35 HEL-S-55;PRDX5 Peroxiredoxin-5, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 471.2813 2 467.273835 932.533118 NaN NaN NaN -0.25473 -0.00011903 NaN NaN NaN NaN 106.63 0.74104 106.63 106.4 107.14 0 0 0 0 0.014375 1 66220 70.525 34.339 1 NaN NaN 0 6260300 0 6260300 38313 1529 14430 14827 60154 60154 VNLAELFK 8 1 0 Unmodified _VNLAELFK_ 0 0 0 V9HW35;P30044 V9HW35 V9HW35 HEL-S-55;PRDX5 Peroxiredoxin-5, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.2812 2 467.273835 932.533118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.72 1 105.72 105.22 106.22 -7.6294E-06 0 0 0 0.038505 1 67200 58.815 26.88 1 38314 1529 14430 14827 60155 60155 VNLFTDFDK 9 1 0 Unmodified _VNLFTDFDK_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q86UM1;C9JZG1 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.7775 2 549.776939 1097.53933 82977.73 0.82882 0.00045567 0.25782 0.00014174 1.0866 0.00059741 549.776891804697 553.784026541131 95.85 0.83572 95.85 95.388 96.224 0 232 70 4 0 0 0 0.024864 2 58203 48.091 48.091 1 1.6211 1.5918 0 20340000 6987800 13353000 38315 241 14431 14828 60156;60157 60156 VNLFTDFDK 9 1 0 Unmodified _VNLFTDFDK_ 0 0 0 Q96G38;B4DXN6;B4DV79;A4D210;A0A024R821;P55884;Q86UM1;C9JZG1 Q96G38 Q96G38 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.7777 2 549.776939 1097.53933 83618.08 0.5599 0.00030782 -0.014328 -7.8774E-06 0.54557 0.00029994 549.776849876901 553.784093111952 94.844 0.73849 94.844 94.483 95.221 0 214 62 5 0 0 0 0.00056832 3 59154 97.431 84.903 1 1.748 1.7761 0 12699000 4140000 8559000 38316 241 14431 14828 60158;60159;60160 60160 VNLLSFTGSTQVGK 14 1 0 Unmodified _VNLLSFTGSTQVGK_ 0 0 0 A0A1B0GTY9;A0A140T9V3;A0A1B0GTG2;A0A1B0GW77;P49419;A0A0J9YWF7;A0A1B0GV49;A0A1B0GTJ4;A0A1B0GUA1;A0A1B0GW82;A0A1B0GUY0 A0A1B0GTY9 A0A1B0GTY9 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.9056 2 725.898648 1449.78274 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.2 1 100.2 99.7 100.7 0 0 0 0 0.0017963 1 61416 69.451 44.575 1 38317 598 14432 14829 60161 60161 VNLLSFTGSTQVGK 14 1 0 Unmodified _VNLLSFTGSTQVGK_ 0 0 0 A0A1B0GTY9;A0A140T9V3;A0A1B0GTG2;A0A1B0GW77;P49419;A0A0J9YWF7;A0A1B0GV49;A0A1B0GTJ4;A0A1B0GUA1;A0A1B0GW82;A0A1B0GUY0 A0A1B0GTY9 A0A1B0GTY9 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.4082 2 725.898648 1449.78274 NaN NaN NaN -0.2358 -0.00017116 NaN NaN NaN NaN 99.474 0.57189 99.474 99.261 99.833 0 0 0 0 0.0078008 1 62278 53.569 45.682 1 NaN NaN 0 7252000 0 7252000 38318 598 14432 14829 60162 60162 VNLNTIK 7 1 0 Unmodified _VNLNTIK_ 0 0 0 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;A8MV53;C9J3W3 A0A0A6YYI3 A0A0A6YYI3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 405.253 2 401.245078 800.475603 95348.3 0.039855 1.5992E-05 -0.0969 -3.8881E-05 -0.057045 -2.2889E-05 401.244937406776 405.252171865474 38.322 0.52447 38.322 38.045 38.57 0 184 42 7 0 0 0 0.030461 1 20020 68.7 4.1771 1 0.81222 0.94052 0 208980000 113780000 95201000 38319 493 14433 14830 60163 60163 VNLTLADLEQLAGSDLK 17 1 0 Unmodified _VNLTLADLEQLAGSDLK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.4916 2 900.491098 1798.96764 65112.39 0.67453 0.00060741 0.28258 0.00025446 0.95711 0.00086187 900.491308018824 904.49858891199 128.54 0.41042 128.54 128.38 128.79 0 165 25 10 0 0 0 6.9851E-18 1 83779 127.71 127.71 1 1.0609 1.1461 0 35166000 18322000 16845000 38320 104 14434 14831 60164 60164 VNLTLADLEQLAGSDLK 17 1 0 Unmodified _VNLTLADLEQLAGSDLK_ 0 0 0 A0A024R250;Q76FK4;F8WE42;F5H101;A6H8Z4;Q6AI50 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.4915 2 900.491098 1798.96764 65108.65 0.8322 0.00074939 0.21734 0.00019571 1.0495 0.0009451 900.49097233526 904.498392074612 128.19 0.38654 128.19 128.07 128.46 0 134 23 9 0 0 0 5.3664E-09 1 85602 103.21 103.21 1 1.0366 1.1379 0 41500000 18870000 22630000 38321 104 14434 14831 60165 60165 VNNASLIGLGYTQTLRPGVK 20 1 1 Unmodified _VNNASLIGLGYTQTLRPGVK_ 0 0 1 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.4066 3 701.063656 2100.16914 72105.26 0.88225 0.00061852 -0.049048 -3.4386E-05 0.8332 0.00058413 701.398165335726 707.405339036645 93.356 0.82555 93.356 92.975 93.801 0 486 70 10 0 0 0 0.0017226 1 56426 30.969 30.969 1 1.5943 1.9261 0 170350000 60677000 109670000 38322 2124 14435 14832 60166 60166 VNNASLIGLGYTQTLRPGVK 20 1 1 Unmodified _VNNASLIGLGYTQTLRPGVK_ 0 0 1 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.4078 3 701.063656 2100.16914 71847.84 0.81467 0.00057114 -0.087421 -6.1288E-05 0.72725 0.00050985 701.397926259123 707.071121452748 92.386 0.82178 92.386 91.897 92.719 0 470 69 9 0 0 0 1.0921E-06 1 57034 67.579 67.579 1 1.5003 1.7717 0 139280000 51732000 87544000 38323 2124 14435 14832 60167 60167 VNNASLIGLGYTQTLRPGVK 20 1 1 Unmodified _VNNASLIGLGYTQTLRPGVK_ 0 0 1 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1060.6061 2 1051.09185 2100.16914 NaN NaN NaN 0.00034277 3.6029E-07 NaN NaN NaN NaN 92.36 0.40562 92.36 92.106 92.511 0 0 0 0 0.014396 1 57075 46.408 33.005 1 NaN NaN 0 9323800 0 9323800 38324 2124 14435 14832 60168 60168 VNNASLIGLGYTQTLRPGVK 20 1 1 Unmodified _VNNASLIGLGYTQTLRPGVK_ 0 0 1 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.4059 3 701.063656 2100.16914 72567.54 0.76132 0.00053374 0.02061 1.4449E-05 0.78193 0.00054818 701.397775752415 707.405417872855 106.56 0.61238 106.56 106.36 106.97 -7.6294E-06 225 38 9 0 0 0 0.053343 1 60875 14.89 14.89 1 2.6759 2.3522 0 32982000 7555900 25426000 38325 2124 14435 14832 60169 60169 VNNASLIGLGYTQTLRPGVK 20 1 1 Unmodified _VNNASLIGLGYTQTLRPGVK_ 0 0 1 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 707.4057 3 701.063656 2100.16914 72362.97 0.62232 0.00043629 -0.101 -7.0804E-05 0.52133 0.00036548 701.397863122651 707.40539101831 106.36 0.70955 106.36 105.98 106.69 0 262 43 10 0 0 0 5.2087E-05 2 59894 43.116 43.116 1 2.1938 1.8657 0 32489000 10645000 21844000 38326 2124 14435 14832 60170;60171 60171 VNNSSLIGLGYTQTLK 16 1 0 Unmodified _VNNSSLIGLGYTQTLK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 858.4733 2 854.467426 1706.9203 65749.93 0.75848 0.0006481 -0.34933 -0.00029849 0.40915 0.0003496 854.467281283254 858.474307726901 96.959 1.1018 96.959 96.535 97.636 0 523 95 10 0 0 0 0.00047126 2 58911 49.333 42.785 1 1.6829 1.972 0 294470000 106380000 188090000 38327 639 14436 14833 60172;60173 60172 VNNSSLIGLGYTQTLK 16 1 0 Unmodified _VNNSSLIGLGYTQTLK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 858.4747 2 854.467426 1706.9203 66179.66 0.69023 0.00058978 -0.2214 -0.00018918 0.46882 0.00040059 854.467403498064 858.474431316614 96.139 0.78353 96.139 95.879 96.663 0 502 68 10 0 0 0 1.576E-09 2 59802 121.24 121.24 1 1.5926 1.8742 0 391430000 135740000 255680000 38328 639 14436 14833 60174;60175 60174 VNNSSLIGLGYTQTLK 16 1 0 Unmodified _VNNSSLIGLGYTQTLK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 858.9769 2 854.467426 1706.9203 66251.16 0.78246 0.00066858 0.0024396 2.0845E-06 0.7849 0.00067067 854.467574000164 858.47451898286 110.28 0.60743 110.28 109.99 110.6 0 220 33 10 0 0 0 0.00035856 1 63533 52.5 52.5 1 1.996 1.6532 0 44555000 14654000 29901000 38329 639 14436 14833 60176 60176 VNNSSLIGLGYTQTLK 16 1 0 Unmodified _VNNSSLIGLGYTQTLK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.4752 2 854.467426 1706.9203 66826.26 0.79558 0.00067979 -0.17357 -0.00014831 0.62201 0.00053149 854.467415672626 858.474386535722 110.09 0.72682 110.09 109.76 110.49 0 232 39 10 0 0 0 0.0014038 1 62496 45.334 45.334 1 2.1072 1.7668 0 47432000 15176000 32257000 38330 639 14436 14833 60177 60177 VNNSSLIGLGYTQTLKPGIK 20 2 0 Unmodified _VNNSSLIGLGYTQTLKPGIK_ 0 0 1 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.4095 3 701.731795 2102.17355 71989.55 0.86661 0.00060813 -0.17045 -0.00011961 0.69616 0.00048852 701.73187325431 707.408688773304 94.062 0.86015 94.062 93.598 94.458 0 414 78 8 0 0 0 2.9375E-05 3 56961 46.133 46.133 1 1.8246 2.1539 0 59863000 26233000 33629000 38331 639 14437 14834 60178;60179;60180 60178 VNNSSLIGLGYTQTLKPGIK 20 2 0 Unmodified _VNNSSLIGLGYTQTLKPGIK_ 0 0 1 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.0748 3 701.731795 2102.17355 71745.02 0.85564 0.00060043 -0.32709 -0.00022953 0.52855 0.0003709 702.06587341802 707.408604152971 93.101 0.79982 93.101 92.624 93.424 0 336 67 7 0 0 0 1.4002E-06 2 57604 62.684 62.684 1 1.7441 2.023 0 79498000 27682000 51816000 38332 639 14437 14834 60181;60182 60181 VNNSSLIGLGYTQTLKPGIK 20 2 0 Unmodified _VNNSSLIGLGYTQTLKPGIK_ 0 0 1 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.0746 3 701.731795 2102.17355 71776.16 0.78237 0.00054902 -0.11228 -7.8788E-05 0.6701 0.00047023 702.065942732077 707.408737372224 107.37 0.78244 107.37 107.13 107.91 7.6294E-06 250 44 11 0 0 0 8.3981E-05 1 61432 38.878 38.878 1 2.2142 1.8792 0 48819000 16225000 32594000 38333 639 14437 14834 60183 60183 VNNSSLIGLGYTQTLKPGIK 20 2 0 Unmodified _VNNSSLIGLGYTQTLKPGIK_ 0 0 1 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1060.1085 2 1052.09405 2102.17355 58009.92 0.33159 0.00034887 0.29277 0.00030803 0.62437 0.00065689 1052.59684814314 1060.61024183225 107.36 0.36645 107.36 107.18 107.55 0 84 22 6 0 0 0 0.042762 1 61529 30.483 30.483 1 2.0252 1.7389 0 7424200 2348400 5075900 38334 639 14437 14834 60184 60184 VNNSSLIGLGYTQTLKPGIK 20 2 0 Unmodified _VNNSSLIGLGYTQTLKPGIK_ 0 0 1 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 707.4092 3 701.731795 2102.17355 71941.76 0.59925 0.00042051 0.075061 5.2673E-05 0.67431 0.00047318 702.066106988622 707.40884687949 107.16 0.58334 107.16 106.88 107.47 0 276 38 12 0 0 0 4.8453E-05 1 60476 43.598 43.598 1 2.0513 1.7483 0 47965000 15633000 32332000 38335 639 14437 14834 60185 60185 VNNSSLIGVGYTQTLR 16 0 1 Unmodified _VNNSSLIGVGYTQTLR_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.462 2 861.462675 1720.9108 67704.43 1.0533 0.00090741 -0.15791 -0.00013603 0.89543 0.00077138 861.462360644158 866.466734929331 87.892 0.29778 87.892 87.739 88.036 0 54 21 5 0 0 0 7.5637E-05 1 54171 81.494 81.494 1 1.808 1.7752 0 13722000 5374800 8347500 38336 28 14438 14835 60186 60186 VNNSSLIGVGYTQTLRPGVK 20 1 1 Unmodified _VNNSSLIGVGYTQTLRPGVK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.0579 3 701.723411 2102.1484 72117.91 0.86371 0.00060609 -0.041251 -2.8947E-05 0.82246 0.00057714 702.057791851631 707.730914642843 82.622 1.104 82.622 82.132 83.236 0 708 94 12 0 0 0 5.7982E-10 2 49204 83.776 83.776 1 2.2905 2.7901 0 611920000 186650000 425270000 38337 28 14439 14836 60187;60188 60188 VNNSSLIGVGYTQTLRPGVK 20 1 1 Unmodified _VNNSSLIGVGYTQTLRPGVK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1061.5944 2 1052.08148 2102.1484 60196.98 0.7026 0.0007392 0.022298 2.346E-05 0.7249 0.00076266 1052.58307303089 1061.09272175556 82.572 0.61636 82.572 82.267 82.883 0 261 51 9 0 0 0 1.7706E-08 1 49423 95.822 95.822 1 2.3261 2.7947 0 72506000 21749000 50757000 38338 28 14439 14836 60189 60189 VNNSSLIGVGYTQTLRPGVK 20 1 1 Unmodified _VNNSSLIGVGYTQTLRPGVK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.0652 3 701.723411 2102.1484 71528.6 0.8174 0.00057359 -0.33118 -0.0002324 0.48621 0.00034119 702.057499007443 708.064804883655 81.375 1.0878 81.375 80.905 81.993 0 672 93 12 0 0 0 2.7209E-09 2 49812 107.65 107.65 1 2.2529 2.69 0 802940000 276230000 526710000 38339 28 14439 14836 60190;60191 60191 VNNSSLIGVGYTQTLRPGVK 20 1 1 Unmodified _VNNSSLIGVGYTQTLRPGVK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1052.5823 2 1052.08148 2102.1484 59599.33 0.69908 0.00073549 -0.44899 -0.00047238 0.25008 0.00026311 1052.58241950941 1061.09233945283 81.375 0.57462 81.375 81.014 81.589 0 263 48 8 0 0 0 1.3702E-05 1 49819 66.285 66.285 1 2.2449 2.6434 0 87263000 29821000 57442000 38340 28 14439 14836 60192 60192 VNNSSLIGVGYTQTLRPGVK 20 1 1 Unmodified _VNNSSLIGVGYTQTLRPGVK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1052.0823 2 1052.08148 2102.1484 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.148 1 81.148 80.648 81.648 0 0 0 0 0.0083827 1 49535 52.891 38.634 1 38341 28 14439 14836 60193 60193 VNNSSLIGVGYTQTLRPGVK 20 1 1 Unmodified _VNNSSLIGVGYTQTLRPGVK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1061.0919 2 1052.08148 2102.1484 58778.5 0.30676 0.00032274 0.031453 3.3091E-05 0.33821 0.00035583 1052.58288409947 1061.09264141214 94.587 0.40406 94.587 94.39 94.794 0 149 24 9 0 0 0 0.026991 1 52861 28.812 28.812 1 3.3368 2.8946 0 16994000 4361100 12633000 38342 28 14439 14836 60194 60194 VNNSSLIGVGYTQTLRPGVK 20 1 1 Unmodified _VNNSSLIGVGYTQTLRPGVK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 702.0583 3 701.723411 2102.1484 70603.3 0.77197 0.00054171 0.21321 0.00014961 0.98517 0.00069132 702.058067990727 707.731168260392 94.585 0.77138 94.585 94.309 95.081 0 310 50 12 0 0 0 3.8644E-07 2 52883 60.032 60.032 1 3.0628 2.7612 0 117400000 28671000 88734000 38343 28 14439 14836 60195;60196 60196 VNNSSLIGVGYTQTLRPGVK 20 1 1 Unmodified _VNNSSLIGVGYTQTLRPGVK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1061.0925 2 1052.08148 2102.1484 59422.54 0.28003 0.00029462 0.2309 0.00024293 0.51093 0.00053754 1052.58293066833 1061.09307721922 94.381 0.47527 94.381 94.158 94.634 0 193 28 11 0 0 0 0.00088661 1 51892 39.947 39.947 1 3.2624 2.7697 0 22828000 5646500 17181000 38344 28 14439 14836 60197 60197 VNNSSLIGVGYTQTLRPGVK 20 1 1 Unmodified _VNNSSLIGVGYTQTLRPGVK_ 0 0 1 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.0591 3 701.723411 2102.1484 71393.32 0.68401 0.00047999 0.1437 0.00010084 0.82771 0.00058083 702.057962982369 707.731099521589 94.382 0.76643 94.382 94.113 94.88 -7.6294E-06 357 46 14 0 0 0 2.4356E-06 2 51919 48.656 48.656 1 3.0456 2.607 0 124430000 29656000 94770000 38345 28 14439 14836 60198;60199 60199 VNNTFSECLNLINEGCPK 18 1 0 Unmodified _VNNTFSECLNLINEGCPK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1059.5032 2 1054.99061 2107.96667 60215.91 0.69393 0.00073209 -0.12677 -0.00013374 0.56716 0.00059835 1054.98992184261 1058.99801739693 100.39 0.47168 100.39 100.25 100.72 7.6294E-06 119 38 5 0 0 0 0.0095855 1 61573 29.689 29.689 1 0.93418 0.95696 0 13061000 6159400 6901500 38346 895 14440 14837 60200 60200 VNNTFSECLNLINEGCPK 18 1 0 Unmodified _VNNTFSECLNLINEGCPK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1055.4944 2 1054.99061 2107.96667 60020.98 0.62828 0.00066283 -0.16377 -0.00017278 0.46451 0.00049005 1054.98973870529 1059.50076300434 99.665 0.53162 99.665 99.512 100.04 7.6294E-06 119 31 6 0 0 0 2.859E-12 1 62493 110.51 104.67 1 0.90699 0.95015 0 10692000 6055000 4636800 38347 895 14440 14837 60201 60201 VNNTFSECLNLINEGCPK 18 1 0 Unmodified _VNNTFSECLNLINEGCPK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1054.9943 2 1054.99061 2107.96667 58733.71 0.561 0.00059185 -0.10896 -0.00011495 0.45204 0.0004769 1055.49234738967 1059.49967750011 113.04 0.64619 113.04 112.83 113.48 0 130 31 9 0 0 0 0.0010919 2 65718 37.092 31.485 1 1.2878 1.0115 0 17057000 7145600 9911000 38348 895 14440 14837 60202;60203 60203 VNNTFSECLNLINEGCPK 18 1 0 Unmodified _VNNTFSECLNLINEGCPK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1059.5002 2 1054.99061 2107.96667 58681.1 0.26644 0.00028109 -0.086215 -9.0956E-05 0.18022 0.00019013 1055.49227818977 1058.9979543684 112.94 0.55351 112.94 112.71 113.26 0 145 26 9 0 0 0 0.0010217 2 64700 37.954 37.954 1 1.2354 0.99172 0 14106000 6993300 7112900 38349 895 14440 14837 60204;60205 60204 VNNVNGNQVGHLK 13 1 0 Unmodified _VNNVNGNQVGHLK_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;Q05DQ5;Q05DF7;Q05BZ6 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.8711 2 696.870756 1391.72696 NaN NaN NaN -0.33137 -0.00023092 NaN NaN NaN NaN 21.815 0.17029 21.815 21.744 21.915 0 0 0 0 0.00030467 1 7924 87.308 67.521 1 NaN NaN 0 3821800 3821800 0 38350 512 14441 14838 60206 60206 VNNVYDVDNK 10 1 0 Unmodified _VNNVYDVDNK_ 0 0 0 G3V547;G3V4D9;G3V5V3;O60524 G3V547 G3V547 NEMF Nuclear export mediator factor NEMF MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.2923 2 590.28566 1178.55677 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.928 1 28.928 28.428 29.428 0 0 0 0 0.0083751 1 13856 59.645 45.649 1 38351 1274 14442 14839 60207 60207 VNPAAALEELEK 12 1 0 Unmodified _VNPAAALEELEK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.3532 2 642.345717 1282.67688 76107.01 0.81519 0.00052364 0.10645 6.8375E-05 0.92164 0.00059201 642.345736664943 646.352898127078 102.35 0.93745 102.35 101.89 102.83 0 440 78 8 0 0 0 1.6998E-05 2 62842 104.79 96.214 1 0.99845 1.1295 0 86384000 43817000 42566000 38352 2008 14443 14840 60208;60209 60209 VNPAAALEELEK 12 1 0 Unmodified _VNPAAALEELEK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3539 2 642.345717 1282.67688 74938.63 0.72126 0.0004633 0.017863 1.1474E-05 0.73913 0.00047478 642.345737057187 646.352915944109 101.56 1.0426 101.56 101.1 102.14 0 493 81 9 0 0 0 2.6748E-08 2 63810 119.34 109.54 1 0.98011 1.0955 0 99442000 49532000 49910000 38353 2008 14443 14840 60210;60211 60211 VNPAAALEELEK 12 1 0 Unmodified _VNPAAALEELEK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 646.3524 2 642.345717 1282.67688 75487.35 0.86243 0.00055398 0.063374 4.0708E-05 0.9258 0.00059469 642.345770601133 646.352837330998 115.07 1.0357 115.07 114.66 115.7 -7.6294E-06 233 49 8 0 0 0 0.00086317 2 67245 64.688 64.688 1 1.5092 1.2335 0 34057000 13807000 20250000 38354 2008 14443 14840 60212;60213 60212 VNPAAALEELEK 12 1 0 Unmodified _VNPAAALEELEK_ 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 646.3536 2 642.345717 1282.67688 75023.04 0.72487 0.00046562 0.13357 8.5796E-05 0.85843 0.00055141 642.345785393308 646.352888251775 114.89 0.8767 114.89 114.6 115.47 0 226 41 9 0 0 0 0.00094953 2 66195 63.408 58.514 1 1.4305 1.154 0 23271000 9799400 13472000 38355 2008 14443 14840 60214;60215 60214 VNPHSLPDPEVNEQSSSK 18 1 0 Unmodified _VNPHSLPDPEVNEQSSSK_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.6514 3 655.316709 1962.9283 74958.79 0.74456 0.00048792 0.10755 7.0481E-05 0.85211 0.0005584 655.316715201117 658.321975600291 41.804 0.49948 41.804 41.61 42.11 0 219 39 8 0 0 0 9.2371E-17 2 22087 113.14 107.02 1 0.30577 0.32873 0 40016000 29865000 10151000 38356 1965 14444 14841 60216;60217 60217 VNPHSLPDPEVNEQSSSK 18 1 0 Unmodified _VNPHSLPDPEVNEQSSSK_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 982.4728 2 982.471426 1962.9283 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.824 1 41.824 41.324 42.324 0 0 0 0 0.028014 1 22096 40.725 16.975 1 38357 1965 14444 14841 60218 60218 VNPHSLPDPEVNEQSSSK 18 1 0 Unmodified _VNPHSLPDPEVNEQSSSK_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.6514 3 655.316709 1962.9283 75786.79 0.74151 0.00048592 -0.18466 -0.00012101 0.55685 0.00036491 655.650932298432 658.321848864273 40.842 0.39819 40.842 40.649 41.047 0 156 27 7 0 0 0 1.9778E-08 2 21893 93.39 83.469 1 0.32939 0.36518 0 47496000 33797000 13699000 38358 1965 14444 14841 60219;60220 60220 VNPHSLPDPEVNEQSSSK 18 1 0 Unmodified _VNPHSLPDPEVNEQSSSK_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 982.4717 2 982.471426 1962.9283 NaN NaN NaN -0.32271 -0.00031705 NaN NaN NaN NaN 40.823 0.073856 40.823 40.796 40.87 0 0 0 0 0.00067047 1 21890 56.122 32.373 1 NaN NaN 0 9550400 9550400 0 38359 1965 14444 14841 60221 60221 VNPHSLPDPEVNEQSSSK 18 1 0 Unmodified _VNPHSLPDPEVNEQSSSK_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.3172 3 655.316709 1962.9283 74990.39 0.55048 0.00036074 0.30894 0.00020246 0.85942 0.00056319 655.316764927993 658.322705856742 48.823 0.61106 48.823 48.553 49.164 0 273 47 8 0 0 0 7.2265E-05 1 23762 47.618 44.471 1 0.55705 0.44585 0 8666100 5299100 3367000 38360 1965 14444 14841 60222 60222 VNPHSLPDPEVNEQSSSK 18 1 0 Unmodified _VNPHSLPDPEVNEQSSSK_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.9879 3 655.316709 1962.9283 75387.38 0.31546 0.00020673 0.2348 0.00015387 0.55026 0.0003606 655.651173695841 657.988139271544 49.157 0.61127 49.157 48.907 49.519 -3.8147E-06 262 47 8 0 0 0 0.00012341 3 23392 45.577 45.577 1 0.59869 0.48755 0 6809500 4000600 2808900 38361 1965 14444 14841 60223;60224;60225 60225 VNPIQGLASK 10 1 0 Unmodified _VNPIQGLASK_ 0 0 0 P13073 P13073 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.8074 2 513.800749 1025.58694 83556.8 0.46722 0.00024006 -0.25609 -0.00013158 0.21113 0.00010848 513.800544265153 517.807569786792 57.729 0.65055 57.729 57.339 57.99 -3.8147E-06 264 53 7 0 0 0 1.2713E-05 1 33323 103.19 89.474 1 1.1072 1.2468 0 69692000 34669000 35023000 38362 1477 14445 14842 60226 60226 VNPIQGLASK 10 1 0 Unmodified _VNPIQGLASK_ 0 0 0 P13073 P13073 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.808 2 513.800749 1025.58694 84918.26 0.23882 0.00012271 -0.061221 -3.1455E-05 0.1776 9.1252E-05 513.800596781782 517.807832218193 67.972 0.60587 67.972 67.699 68.304 0 214 46 6 0 0 0 0.038692 1 34610 39.305 35.558 1 1.4311 1.1338 0 3978700 1542900 2435700 38363 1477 14445 14842 60227 60227 VNPQISDEKDEDEKEEK 17 3 0 Unmodified _VNPQISDEKDEDEKEEK_ 0 0 2 A0A024R7E3;P26358;Q59FP7;I6L9H2 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 685.9978 3 677.983284 2030.92802 74460.16 0.11076 7.5095E-05 0.42907 0.0002909 0.53983 0.00036599 677.983483149548 685.997742547949 19.654 0.26032 19.654 19.543 19.803 0 62 14 8 0 0 0 0.019633 2 4822 25.167 25.167 1 0.94969 0.93927 0 1894300 946110 948200 38364 222 14446 14843 60228;60229 60228 VNPTVFFDIAVDGEPLGR 18 0 1 Unmodified _VNPTVFFDIAVDGEPLGR_ 0 0 0 V9HWF5;A8K486;P62937;B4DM82;B2RE56;F8WE65;C9J5S7;E5RIZ5 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.5091 2 973.50454 1944.99453 NaN NaN NaN 0.51448 0.00050085 NaN NaN NaN NaN 131.47 0.67876 131.47 131.15 131.83 0 0 0 0 2.3463E-18 1 85675 117.92 104.25 1 NaN NaN 0 11786000 0 11786000 38365 731 14447 14844 60230 60230 VNPTVFFDIAVDGEPLGR 18 0 1 Unmodified _VNPTVFFDIAVDGEPLGR_ 0 0 0 V9HWF5;A8K486;P62937;B4DM82;B2RE56;F8WE65;C9J5S7;E5RIZ5 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 979.0137 2 973.50454 1944.99453 62699.19 0.5634 0.00054847 0.33185 0.00032306 0.89525 0.00087153 973.50494068882 978.509064512333 131.08 0.84607 131.08 130.56 131.41 0 246 61 7 0 0 0 4.2767E-06 3 87547 84.297 84.297 1 4.0481 4.3341 0 25082000 5890900 19191000 38366 731 14447 14844 60231;60232;60233 60232 VNQAIWLLCTGAR 13 0 1 Unmodified _VNQAIWLLCTGAR_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.4055 2 751.400835 1500.78712 68877.68 0.62666 0.00047087 -0.18073 -0.0001358 0.44593 0.00033507 751.400888193315 756.40427746638 105.65 0.9105 105.65 105.2 106.11 -7.6294E-06 327 69 6 0 0 0 7.1788E-06 3 65422 103.63 103.63 1 1.016 1.0748 0 40941000 19424000 21517000 38367 160 14448 14845 60234;60235;60236 60236 VNQAIWLLCTGAR 13 0 1 Unmodified _VNQAIWLLCTGAR_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.4048 2 751.400835 1500.78712 69525.05 0.75035 0.00056381 -0.036843 -2.7684E-05 0.7135 0.00053613 751.400946685103 756.404686135905 104.82 0.93637 104.82 104.38 105.32 -7.6294E-06 354 63 8 0 0 0 3.1697E-06 4 66423 108.7 108.7 1 1.0654 1.2345 0 57750000 21251000 36499000 38368 160 14448 14845 60237;60238;60239;60240 60239 VNQAIWLLCTGAR 13 0 1 Unmodified _VNQAIWLLCTGAR_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 751.4011 2 751.400835 1500.78712 69968.26 0.56304 0.00042307 -0.15452 -0.00011611 0.40853 0.00030697 751.40093761888 756.404671418539 117.13 0.53675 117.13 116.87 117.41 0 133 23 8 0 0 0 9.654E-05 2 68893 92.866 89.548 1 0.92479 0.76466 0 11353000 6106700 5246400 38369 160 14448 14845 60241;60242 60241 VNQAIWLLCTGAR 13 0 1 Unmodified _VNQAIWLLCTGAR_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.4052 2 751.400835 1500.78712 70301.9 0.61386 0.00046125 -0.10695 -8.036E-05 0.50691 0.00038089 751.40082881779 756.40483985302 116.92 0.62129 116.92 116.66 117.28 0 139 28 8 0 0 0 1.8317E-06 2 67870 110.39 110.39 1 0.97539 0.79376 0 9757900 4740800 5017100 38370 160 14448 14845 60243;60244 60244 VNQCVIGTAQANR 13 0 1 Unmodified _VNQCVIGTAQANR_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.8614 2 715.862074 1429.7096 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.703 1 32.703 32.203 33.203 0 0 0 0 0.001001 1 16284 78.136 60.701 1 38371 371 14449 14846 60245 60245 VNQELAGYTGGDVSFIK 17 1 0 Unmodified _VNQELAGYTGGDVSFIK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.455 2 899.454516 1796.89448 63123.04 0.76433 0.00068748 0.25066 0.00022546 1.015 0.00091294 899.454733512109 903.963053232921 95.442 0.64358 95.442 95.141 95.785 0 238 48 7 0 0 0 2.6581E-07 1 57995 97.69 84.289 1 1.0013 1.0775 0 33164000 19130000 14034000 38372 2147 14450 14847 60246 60246 VNQELAGYTGGDVSFIK 17 1 0 Unmodified _VNQELAGYTGGDVSFIK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.4545 2 899.454516 1796.89448 63416.34 0.64162 0.0005771 -0.0027523 -2.4755E-06 0.63886 0.00057463 899.956030028959 903.962723296625 94.714 0.64348 94.714 94.433 95.076 0 266 53 7 0 0 0 1.0005E-09 1 58798 110.92 95.058 1 1.0496 1.1492 0 40751000 24267000 16484000 38373 2147 14450 14847 60247 60247 VNQELAGYTGGDVSFIK 17 1 0 Unmodified _VNQELAGYTGGDVSFIK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 899.456 2 899.454516 1796.89448 64309.03 0.58379 0.00052509 0.10068 9.0558E-05 0.68447 0.00061565 899.454794027084 903.963112671383 108.74 0.43079 108.74 108.56 108.99 0 98 20 7 0 0 0 0.021207 1 62493 24.558 24.558 1 1.799 1.4354 0 6885100 2809000 4076100 38374 2147 14450 14847 60248 60248 VNQELAGYTGGDVSFIK 17 1 0 Unmodified _VNQELAGYTGGDVSFIK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 903.9632 2 899.454516 1796.89448 64319.64 0.28815 0.00025918 0.17577 0.00015809 0.46392 0.00041727 899.956083902298 903.461838318625 108.7 0.47585 108.7 108.44 108.92 0 128 24 8 0 0 0 0.00018882 2 61567 50.843 45.459 1 2.4122 1.9827 0 9778600 3321200 6457400 38375 2147 14450 14847 60249;60250 60249 VNQPASFAIR 10 0 1 Unmodified _VNQPASFAIR_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.808 2 551.803823 1101.59309 83135.88 0.65762 0.00036288 0.26549 0.0001465 0.92311 0.00050937 551.803964668736 556.808129047108 57.184 0.41196 57.184 56.953 57.365 -3.8147E-06 72 29 4 0 0 0 0.00030431 1 32229 90.657 78.068 1 1.5147 1.5823 0 10634000 5086600 5547200 38376 1402 14451 14848 60251 60251 VNQPASFAVSLNGAK 15 1 0 Unmodified _VNQPASFAVSLNGAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.9006 2 751.901722 1501.78889 73714.64 0.45248 0.00034022 0.11948 8.9838E-05 0.57196 0.00043006 751.901558575538 755.908830241454 78.506 0.36823 78.506 78.294 78.663 0 110 32 5 0 0 0 0.00074078 2 46495 51.013 51.013 1 1.4064 1.4578 0 11260000 6061100 5198500 38377 1504 14452 14849 60252;60253 60253 VNQPASFAVSLNGAK 15 1 0 Unmodified _VNQPASFAVSLNGAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 751.9044 2 751.901722 1501.78889 71385.55 0.8114 0.0006101 0.16978 0.00012766 0.98118 0.00073775 751.901330452809 755.90892601495 77.51 0.3907 77.51 77.295 77.686 0 92 31 5 0 0 0 0.00049803 3 46898 56.205 56.205 1 1.3097 1.3248 0 16432000 7255300 9177100 38378 1504 14452 14849 60254;60255;60256 60256 VNQTVAALK 9 1 0 Unmodified _VNQTVAALK_ 0 0 0 A0A087WXR7;Q8N451;Q5TBB1 A0A087WXR7 A0A087WXR7 RNASEH2B Ribonuclease H2 subunit B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.5573 1 943.557107 942.549831 63877.08 0.47022 0.00044368 0.29224 0.00027575 0.76246 0.00071943 943.557647573358 951.571925816782 83.336 0.80033 83.336 83.012 83.812 7.6294E-06 201 68 4 0 0 0 0.0036651 1 49744 81.296 34.87 1 0.57031 0.58681 0 17432000 10459000 6972900 38379 430 14453 14850 60257 60257 VNSININQGSITFAGGPGR 19 0 1 Unmodified _VNSININQGSITFAGGPGR_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 952.0007 2 951.495038 1900.97552 63047.87 0.94626 0.00090036 -0.3798 -0.00036138 0.56646 0.00053898 951.494876828861 956.499050405547 91.272 0.63168 91.272 91.042 91.673 0 274 51 8 0 0 0 1.7313E-39 3 55155 151.74 151.74 1 1.0901 1.1689 0 46197000 23334000 22862000 38380 1088;1189 14454 14851 60258;60259;60260 60260 VNSININQGSITFAGGPGR 19 0 1 Unmodified _VNSININQGSITFAGGPGR_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 957.0028 2 951.495038 1900.97552 63120.54 0.97036 0.0009233 -0.21665 -0.00020614 0.75372 0.00071716 951.99655970395 956.498964060308 90.717 0.68065 90.717 90.396 91.076 0 299 53 8 0 0 0 8.6418E-12 1 55888 100.22 100.22 1 1.1805 1.3302 0 46625000 22225000 24400000 38381 1088;1189 14454 14851 60261 60261 VNSININQGSITFAGGPGR 19 0 1 Unmodified _VNSININQGSITFAGGPGR_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 956.499 2 951.495038 1900.97552 62790.68 0.44949 0.00042769 0.51484 0.00048987 0.96433 0.00091756 951.496086918929 956.499337819058 104.84 0.74039 104.84 104.59 105.33 0 244 42 8 0 0 0 2.4603E-05 2 59672 59.248 59.248 1 1.1959 0.99166 0 11079000 4642600 6436500 38382 1088;1189 14454 14851 60262;60263 60262 VNSININQGSITFAGGPGR 19 0 1 Unmodified _VNSININQGSITFAGGPGR_ 0 0 0 F5H6E2;B7Z3E5;O00159;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 957.0018 2 951.495038 1900.97552 62592.91 0.30399 0.00028925 0.57206 0.00054431 0.87605 0.00083356 951.495964422323 957.000670544628 104.66 0.74403 104.66 104.39 105.13 0 225 42 8 0 0 0 6.1085E-06 2 58660 78.814 78.814 1 1.2694 1.0281 0 10410000 4687200 5722500 38383 1088;1189 14454 14851 60264;60265 60264 VNSLAPGPISGTEGLR 16 0 1 Unmodified _VNSLAPGPISGTEGLR_ 0 0 0 A0A0J9YWI0;Q4VXZ8;Q9NUI1 A0A0J9YWI0 A0A0J9YWI0 DECR2 Peroxisomal 2,4-dienoyl-CoA reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.4269 2 784.425562 1566.83657 69342.38 0.79628 0.00062463 0.42225 0.00033123 1.2185 0.00095585 784.426094360679 789.429282310382 80.108 0.3319 80.108 79.978 80.309 0 63 27 4 0 0 0 3.7544E-06 3 47632 88.187 59.23 1 0.41064 0.42791 0 13383000 10163000 3220500 38384 538 14455 14852 60266;60267;60268 60267 VNSLGETAER 10 0 1 Unmodified _VNSLGETAER_ 0 0 0 A0A0D9SF54;A0A0D9SGF6;Q13813;A0A024R889;Q9UG16 A0A0D9SF54 A0A0D9SF54 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.2763 2 538.272552 1074.53055 81487.27 0.65199 0.00035095 0.3585 0.00019297 1.0105 0.00054392 538.272878080219 543.276500650734 22.888 0.47235 22.888 22.673 23.145 0 90 25 6 0 0 0 0.0013256 1 8796 74.165 48.06 1 1.7139 1.7191 0 16150000 4724200 11426000 38385 523 14456 14853 60269 60269 VNTDLGNDLYFVK 13 1 0 Unmodified _VNTDLGNDLYFVK_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.3838 2 749.382831 1496.75111 68908.73 0.89165 0.00066819 0.092344 6.9201E-05 0.984 0.00073739 749.383516223893 753.390046465732 100.37 0.80985 100.37 100.01 100.82 0 317 65 8 0 0 0 7.998E-09 2 61467 117.14 96.266 1 1.7458 1.885 0 42127000 15517000 26610000 38386 1012 14457 14854 60270;60271 60271 VNTDLGNDLYFVK 13 1 0 Unmodified _VNTDLGNDLYFVK_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.8923 2 749.382831 1496.75111 68467.41 0.68029 0.0005098 0.61842 0.00046343 1.2987 0.00097323 749.383717958197 753.390256227641 99.665 0.73811 99.665 99.326 100.06 0 317 58 8 0 0 0 7.7297E-05 2 62345 94.465 79.2 1 1.7578 1.9588 0 51766000 17145000 34621000 38387 1012 14457 14854 60272;60273 60272 VNTDLGNDLYFVK 13 1 0 Unmodified _VNTDLGNDLYFVK_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 753.39 2 749.382831 1496.75111 69448.33 1.0503 0.00078709 -0.13977 -0.00010474 0.91054 0.00068234 749.382120925122 753.389715372562 112.85 0.5332 112.85 112.58 113.11 0 112 24 7 0 0 0 0.00016098 2 65587 87.184 75.318 1 1.7942 1.4321 0 9329700 3377900 5951800 38388 1012 14457 14854 60274;60275 60274 VNTDLGNDLYFVK 13 1 0 Unmodified _VNTDLGNDLYFVK_ 0 0 0 B4DNM0;Q8WVC0 B4DNM0 B4DNM0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 749.384 2 749.382831 1496.75111 68552.02 0.60235 0.00045139 -0.010279 -7.7026E-06 0.59208 0.00044369 749.382631403666 753.390286914883 112.76 0.58253 112.76 112.44 113.03 0 124 26 7 0 0 0 0.00015017 2 64594 84.479 84.479 1 1.6863 1.376 0 7912900 3332100 4580700 38389 1012 14457 14854 60276;60277 60277 VNTFSALLLEPYKPPSAQ 18 1 0 Unmodified _VNTFSALLLEPYKPPSAQ_ 0 0 1 A0A087WXS7;O43681 A0A087WXS7 A0A087WXS7 ASNA1 ATPase ASNA1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 992.0367 2 988.030391 1974.04623 NaN NaN NaN 0.88609 0.00087549 NaN NaN NaN NaN 119.64 0.36909 119.64 119.48 119.85 0 0 0 0 0.00071797 1 77002 66.989 44.791 1 NaN NaN 0 4225100 0 4225100 38390 431 14458 14855 60278 60278 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.5661 3 414.56646 1240.67755 91568.21 0.16431 6.8119E-05 -0.027484 -1.1394E-05 0.13683 5.6725E-05 414.566546019252 420.573847033065 29.581 0.48308 29.581 29.344 29.827 -1.9073E-06 178 34 11 0 0 0 1.4455E-06 3 14305 111.5 86.464 1 0.82121 1.0037 0 1033300000 562560000 470730000 38391 796 14459 14856 60279;60280;60281 60280 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.3578 2 621.346052 1240.67755 76236.57 0.57027 0.00035433 -0.016305 -1.0131E-05 0.55396 0.0003442 621.345990620456 630.357228236232 29.593 0.2273 29.593 29.45 29.677 0 126 18 9 0 0 0 3.959E-40 2 14298 233.14 184.44 1 0.7639 0.9295 0 516960000 296480000 220480000 38392 796 14459 14856 60282;60283 60282 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 414.5664 3 414.56646 1240.67755 91398.04 0.095635 3.9647E-05 -0.12249 -5.0781E-05 -0.026856 -1.1134E-05 414.566425300278 420.573861024409 29.991 1.5187 29.991 29.677 31.196 -1.9073E-06 763 135 10 0 0 0 0.00015623 2 14783 86.313 63.087 1 0.56104 0.68471 0 822580000 508810000 313770000 38393 796 14459 14856 60284;60285 60284 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.3464 2 621.346052 1240.67755 76178.3 0.49806 0.00030947 0.020293 1.2609E-05 0.51835 0.00032208 621.345967635039 630.357343323896 29.928 1.3148 29.928 29.664 30.979 0 555 115 8 0 0 0 1.4947E-65 1 14784 261.35 199.79 1 0.56207 0.68327 0 446140000 283420000 162720000 38394 796 14459 14856 60286 60286 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.3585 2 621.346052 1240.67755 NaN NaN NaN 0.45359 0.00028183 NaN NaN NaN NaN 30.576 0.61536 30.576 30.463 31.079 0 0 0 0 0.0009543 1 15034 96.171 63.757 1 NaN NaN 0 21662000 0 21662000 38395 796 14459 14856 60287 60287 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.3458 2 621.346052 1240.67755 76845.83 0.80245 0.0004986 -0.33515 -0.00020824 0.4673 0.00029036 621.345967437961 630.35691371865 29.141 0.2908 29.141 29.017 29.308 0 143 18 10 0 0 0 5.5648E-79 2 13957 253.88 197.67 1 0.63945 0.76763 0 1892600000 1151900000 740640000 38396 796 14459 14856 60288;60289 60289 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.5667 3 414.56646 1240.67755 90725.67 0.49254 0.00020419 -0.51321 -0.00021276 -0.020663 -8.5662E-06 414.566499056361 420.573627113154 29.142 0.38477 29.142 28.937 29.322 0 153 21 10 0 0 0 0.00012722 2 13955 89.533 57.776 1 0.64825 0.7809 0 3289000000 1929000000 1360000000 38397 796 14459 14856 60290;60291 60290 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.5674 3 414.56646 1240.67755 91957.89 0.4321 0.00017913 -0.22808 -9.4555E-05 0.20402 8.4578E-05 414.566375011307 420.573817026893 29.55 0.92545 29.55 29.24 30.166 0 460 73 9 0 0 0 0.00024452 1 14493 74.46 55.65 1 0.54386 0.64848 0 645000000 407760000 237240000 38398 796 14459 14856 60292 60292 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 621.3478 2 621.346052 1240.67755 76285.04 0.73495 0.00045666 -0.068535 -4.2584E-05 0.66641 0.00041407 621.345938590723 630.357200752075 29.549 0.76081 29.549 29.297 30.058 0 364 59 8 0 0 0 3.8076E-16 1 14495 172.56 138.82 1 0.53244 0.63265 0 370530000 239890000 130640000 38399 796 14459 14856 60293 60293 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 420.5735 3 414.56646 1240.67755 92321.06 -0.065817 -2.7286E-05 0.0065168 2.7016E-06 -0.059301 -2.4584E-05 414.566322128831 420.574010010889 30.237 0.51959 30.237 30.113 30.633 0 175 43 6 0 0 0 0.0096873 1 14736 43.501 43.501 1 0.55198 0.64862 0 63058000 38159000 24900000 38400 796 14459 14856 60294 60294 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.3596 2 621.346052 1240.67755 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.099 1 30.099 29.599 30.599 0 0 0 0 1.861E-13 1 14680 132.32 98.574 1 38401 796 14459 14856 60295 60295 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.3569 2 621.346052 1240.67755 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.135 1 31.135 30.635 31.635 -1.9073E-06 0 0 0 0.0019219 1 15353 74.944 47.69 1 38402 796 14459 14856 60296 60296 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.3576 2 621.346052 1240.67755 75621.14 0.60426 0.00037545 -0.2028 -0.00012601 0.40146 0.00024944 621.34586818895 630.357136049113 33.453 2.0424 33.453 33.241 35.283 0 893 176 8 0 0 0 0.00015664 3 15156 115.18 88.061 1 0.74489 0.6697 0 102230000 55327000 46904000 38403 796 14459 14856 60297;60298;60299 60299 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 420.5742 3 414.56646 1240.67755 91219.98 -0.11829 -4.9041E-05 0.035225 1.4603E-05 -0.08307 -3.4438E-05 414.566445234619 420.573964356917 33.462 2.2641 33.462 33.22 35.484 0 1048 194 8 0 0 0 0.0086785 3 14592 44.616 41.218 1 0.7659 0.69202 0 131200000 70402000 60797000 38404 796 14459 14856 60300;60301;60302 60301 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 621.3459 2 621.346052 1240.67755 76433.55 0.47331 0.00029409 -0.21656 -0.00013456 0.25675 0.00015953 621.345871905988 630.357108101763 33.589 1.4565 33.589 33.332 34.789 0 798 118 9 0 0 0 1.6913E-17 4 14581 178.46 127.99 1 0.75119 0.6426 0 109350000 63698000 45655000 38405 796 14459 14856 60303;60304;60305;60306 60305 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 414.9005 3 414.56646 1240.67755 91482.63 -0.35688 -0.00014795 0.20761 8.6067E-05 -0.14928 -6.1885E-05 414.566546453679 420.573993441699 33.596 1.8525 33.596 33.332 35.185 0 898 153 10 0 0 0 0.0022675 2 14136 57.164 39.425 1 0.76269 0.65355 0 155370000 89169000 66203000 38406 796 14459 14856 60307;60308 60307 VNTLIRPDGEKK 12 2 1 Unmodified _VNTLIRPDGEKK_ 0 0 2 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 465.9437 3 457.264781 1368.77251 88250.18 0.050228 2.2968E-05 -0.20782 -9.5027E-05 -0.15759 -7.2059E-05 457.264740471565 465.943536207386 24.405 0.52356 24.405 24.195 24.719 0 156 24 9 0 0 0 0.01701 2 8023 41.401 34.75 1 0.85973 0.83697 0 20634000 11406000 9227600 38407 796 14460 14857 60309;60310 60309 VNTPTTTVYR 10 0 1 Unmodified _VNTPTTTVYR_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 581.3112 2 576.306395 1150.59824 79632.82 0.51119 0.0002946 0.27415 0.000158 0.78534 0.0004526 576.306427381594 581.310537690306 37.652 0.53347 37.652 37.449 37.982 0 129 43 5 0 0 0 0.00060252 1 19214 84.213 61.473 1 1.8477 1.9182 0 22477000 8282200 14195000 38408 892 14461 14858 60311 60311 VNTPTTTVYR 10 0 1 Unmodified _VNTPTTTVYR_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.3101 2 576.306395 1150.59824 NaN NaN NaN -0.028016 -1.6146E-05 NaN NaN NaN NaN 36.728 0.3439 36.728 36.525 36.869 0 0 0 0 0.0030426 1 18890 78.113 67.699 1 NaN NaN 0 18785000 0 18785000 38409 892 14461 14858 60312 60312 VNTPTTTVYR 10 0 1 Unmodified _VNTPTTTVYR_ 0 0 0 Q5M7Z9;B2RDX5;Q53GX7;P26639;B4DKZ9;B3KTN2 Q5M7Z9 Q5M7Z9 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.3112 2 576.306395 1150.59824 81663.02 0.45665 0.00026317 -0.14845 -8.5554E-05 0.3082 0.00017762 576.306071478695 581.310766979943 43.22 0.6502 43.22 42.984 43.634 3.8147E-06 107 41 4 0 0 0 0.055642 1 20373 35.511 32.352 1 0.8183 0.71808 0 1721900 879180 842740 38410 892 14461 14858 60313 60313 VNVDPEDLIPK 11 1 0 Unmodified _VNVDPEDLIPK_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.8357 2 619.834985 1237.65542 77019.98 0.43593 0.0002702 0.3135 0.00019432 0.74943 0.00046452 619.835150183003 623.842187033634 102.66 1.0102 102.66 102.19 103.2 0 463 85 7 0 0 0 0.0017197 2 63053 65.347 59.931 1 0.85272 0.96601 0 98718000 53460000 45258000 38411 1726 14462 14859 60314;60315 60315 VNVDPEDLIPK 11 1 0 Unmodified _VNVDPEDLIPK_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.3374 2 619.834985 1237.65542 76538.59 0.3171 0.00019655 0.46557 0.00028858 0.78267 0.00048513 619.835269797857 623.842219002506 101.98 1.0222 101.98 101.53 102.55 0 421 77 8 0 0 0 0.020453 1 64072 43.77 29.563 1 0.87911 1.021 0 227640000 119790000 107860000 38412 1726 14462 14859 60316 60316 VNVDPEDLIPK 11 1 0 Unmodified _VNVDPEDLIPK_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.8357 2 619.834985 1237.65542 76136.03 0.75675 0.00046906 0.12477 7.7339E-05 0.88152 0.0005464 619.83481291768 623.842151382859 114.7 0.92214 114.7 114.35 115.27 0 210 41 7 0 0 0 0.0052054 2 66956 56.632 51.319 1 1.2058 0.97918 0 27480000 12881000 14599000 38413 1726 14462 14859 60317;60318 60317 VNVDPEDLIPK 11 1 0 Unmodified _VNVDPEDLIPK_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.8425 2 619.834985 1237.65542 76000.38 0.62738 0.00038887 -0.033553 -2.0797E-05 0.59383 0.00036808 619.834601099527 623.842153605124 114.65 0.87566 114.65 114.2 115.07 7.6294E-06 183 35 7 0 0 0 0.00013811 2 66037 95.483 86.149 1 1.2576 1.0287 0 26662000 11264000 15398000 38414 1726 14462 14859 60319;60320 60319 VNVTGIYR 8 0 1 Unmodified _VNVTGIYR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RG31 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.2643 2 461.261259 920.507966 87543.27 0.32864 0.00015159 -1.4406 -0.00066449 -1.112 -0.0005129 461.260832201081 466.264358590794 50.797 0.34883 50.797 50.506 50.855 -3.8147E-06 124 32 6 0 0 0 0.027047 1 27993 54.157 29.159 1 3.6472 4.043 0 65614000 18578000 47036000 38415 235 14463 14860 60321 60321 VNVTVDYIRPASPATETVPAFSER 24 0 2 Unmodified _VNVTVDYIRPASPATETVPAFSER_ 0 0 1 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 880.7935 3 873.785287 2618.33403 65087.51 0.84257 0.00073623 0.22091 0.00019302 1.0635 0.00092925 874.119673913505 880.79203613447 100 0.70023 100 99.706 100.41 0 407 62 9 0 0 0 2.6604E-09 5 61229 57.293 49.847 1 1.5364 1.671 0 53212000 16601000 36611000 38416 618 14464 14861 60322;60323;60324;60325;60326 60323 VNVTVDYIRPASPATETVPAFSER 24 0 2 Unmodified _VNVTVDYIRPASPATETVPAFSER_ 0 0 1 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.1198 3 873.785287 2618.33403 65377.4 0.61521 0.00053756 0.33534 0.00029302 0.95056 0.00083058 874.119564074546 880.792137228676 99.236 0.56449 99.236 98.989 99.553 -7.6294E-06 352 48 10 0 0 0 1.0813E-12 2 62135 74.408 67.048 1 1.4272 1.6456 0 63619000 24844000 38775000 38417 618 14464 14861 60327;60328 60328 VNVTVDYIRPASPATETVPAFSER 24 0 2 Unmodified _VNVTVDYIRPASPATETVPAFSER_ 0 0 1 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 874.1201 3 873.785287 2618.33403 65323.78 0.81003 0.00070779 -0.36644 -0.00032019 0.44358 0.0003876 874.119356944234 880.791276344946 112.1 0.37912 112.1 111.92 112.3 0 157 22 10 0 0 0 0.011406 2 65047 22.257 19.494 1 1.053 0.88939 0 10013000 4769700 5243200 38418 618 14464 14861 60329;60330 60330 VNVTVDYIRPASPATETVPAFSER 24 0 2 Unmodified _VNVTVDYIRPASPATETVPAFSER_ 0 0 1 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 880.7918 3 873.785287 2618.33403 65570.77 0.32132 0.00028077 0.23487 0.00020523 0.5562 0.000486 874.119820310143 880.458222934654 111.93 0.43282 111.93 111.7 112.13 0 146 22 10 0 0 0 9.8617E-06 2 63990 40.986 37.65 1 1.0041 0.92248 0 12824000 6464600 6359700 38419 618 14464 14861 60331;60332 60331 VPAELICLDPR 11 0 1 Unmodified _VPAELICLDPR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.8457 2 641.84483 1281.67511 74916.26 0.96858 0.00062168 0.2148 0.00013787 1.1834 0.00075955 641.845085298255 646.849466302176 95.85 0.71909 95.85 95.493 96.212 0 276 62 6 0 0 0 2.6146E-05 2 58250 102.52 82.747 1 0.83348 0.92273 0 61840000 34772000 27067000 38420 809 14465 14862 60333;60334 60333 VPAELICLDPR 11 0 1 Unmodified _VPAELICLDPR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.8453 2 641.84483 1281.67511 75633.92 0.76815 0.00049303 0.046353 2.9751E-05 0.8145 0.00052278 641.844964673004 646.849167607274 108.95 0.86217 108.95 108.6 109.46 7.6294E-06 181 41 6 0 0 0 0.00032579 2 62615 87.298 76.147 1 1.3193 1.0806 0 12984000 6259500 6724200 38421 809 14465 14862 60335;60336 60336 VPAELICLDPR 11 0 1 Unmodified _VPAELICLDPR_ 0 0 0 B0UZZ8;O15213;B4DNI0;A8K9A1;B4DP15;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 641.8454 2 641.84483 1281.67511 75972.59 0.66723 0.00042826 -0.25759 -0.00016533 0.40964 0.00026292 641.844930297289 646.849060973679 108.82 0.85989 108.82 108.4 109.26 0 208 42 8 0 0 0 0.0040596 3 61592 58.699 47.548 1 1.3173 1.0824 0 13880000 6164700 7715500 38422 809 14465 14862 60337;60338;60339 60339 VPAGNWVLIEGVDQPIVK 18 1 0 Unmodified _VPAGNWVLIEGVDQPIVK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 967.5406 2 967.540926 1933.0673 61546.48 0.56947 0.00055098 -0.57609 -0.00055739 -0.0066233 -6.4083E-06 967.540565813195 971.547220353779 118.87 0.55025 118.87 118.59 119.14 0 210 31 9 0 0 0 2.6066E-31 1 76260 150.26 150.26 1 0.8988 1.0003 0 60872000 33573000 27299000 38423 794 14466 14863 60340 60340 VPAGNWVLIEGVDQPIVK 18 1 0 Unmodified _VPAGNWVLIEGVDQPIVK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 968.0422 2 967.540926 1933.0673 61462.77 0.0013673 1.3229E-06 0.20014 0.00019364 0.2015 0.00019496 968.042774698435 972.049536253173 131.1 0.86855 131.1 130.56 131.43 0 151 30 9 0 0 0 8.8636E-08 2 79545 90.861 90.861 1 0.90583 0.71529 0 10696000 5152900 5542700 38424 794 14466 14863 60341;60342 60342 VPAGNWVLIEGVDQPIVK 18 1 0 Unmodified _VPAGNWVLIEGVDQPIVK_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 968.0421 2 967.540926 1933.0673 62893.03 0.39783 0.00038491 -0.020148 -1.9494E-05 0.37768 0.00036542 968.04217275128 972.04943800431 130.89 0.6546 130.89 130.6 131.26 0 162 29 9 0 0 0 5.8161E-08 1 78487 94.023 94.023 1 0.93686 0.77141 0 12148000 5852400 6295400 38425 794 14466 14863 60343 60343 VPAHGHPVIER 11 0 1 Unmodified _VPAHGHPVIER_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 407.8963 3 404.55964 1210.65709 NaN NaN NaN 0.21366 8.6438E-05 NaN NaN NaN NaN 18.678 0.45041 18.678 18.296 18.746 0 0 0 0 0.035022 1 5596 35.737 17.297 1 NaN NaN 0 3221700 0 3221700 38426 2063 14467 14864 60344 60344 VPAINVNDSVTK 12 1 0 Unmodified _VPAINVNDSVTK_ 0 0 0 P23526;Q1RMG2 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.8527 2 628.845884 1255.67722 76878.76 0.4149 0.00026091 -0.24568 -0.00015449 0.16922 0.00010641 628.845869719982 632.852706431328 59.154 0.32196 59.154 58.994 59.316 0 118 24 6 0 0 0 0.00034029 1 33679 72.434 61.604 1 1.5136 1.6258 0 39585000 15530000 24055000 38427 1512 14468 14865 60345 60345 VPAINVNDSVTK 12 1 0 Unmodified _VPAINVNDSVTK_ 0 0 0 P23526;Q1RMG2 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.8535 2 628.845884 1255.67722 78269.49 0.59168 0.00037207 0.13924 8.7558E-05 0.73091 0.00045963 628.845970816065 632.853085911519 58.117 0.28382 58.117 57.99 58.274 0 104 21 6 0 0 0 0.00023679 1 33695 87.777 77.254 1 1.3733 1.5243 0 48893000 22398000 26495000 38428 1512 14468 14865 60346 60346 VPAINVNDSVTK 12 1 0 Unmodified _VPAINVNDSVTK_ 0 0 0 P23526;Q1RMG2 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 632.8535 2 628.845884 1255.67722 78438.66 0.45718 0.00028749 0.14994 9.4291E-05 0.60712 0.00038179 628.846175476661 632.852910298458 68.662 0.3431 68.662 68.481 68.824 0 104 25 6 0 0 0 0.021273 1 35906 38.783 33.242 1 0.87828 0.70367 0 2877500 1420200 1457300 38429 1512 14468 14865 60347 60347 VPAVANYIMK 10 1 0 Oxidation (M) _VPAVANYIM(ox)K_ VPAVANYIM(1)K VPAVANYIM(74.13)K 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.3043 2 561.30481 1120.59507 82909.28 0.60921 0.00034195 -0.78563 -0.00044098 -0.17642 -9.9026E-05 561.304686633885 565.311978473989 65.514 0.65408 65.514 65.105 65.759 0 257 58 6 0 0 0 0.00064624 1 37613 74.127 65.264 1 0.924 0.9068 0 20465000 12478000 7986500 38430 878 14469 14866 60348 60348 692 VPAVANYIMK 10 1 0 Oxidation (M) _VPAVANYIM(ox)K_ VPAVANYIM(1)K VPAVANYIM(97.8)K 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.3116 2 561.30481 1120.59507 84463.12 0.52884 0.00029684 0.030388 1.7057E-05 0.55922 0.0003139 561.304816470797 565.311930972238 64.277 0.52249 64.277 64.038 64.561 0 188 48 5 0 0 0 4.165E-05 2 37797 97.798 90.108 1 1.0127 1.0214 0 13325000 6331600 6993200 38431 878 14469 14866 60349;60350 60350 692 VPDALVFTIQTR 12 0 1 Unmodified _VPDALVFTIQTR_ 0 0 0 B3KN79;Q15646 B3KN79 B3KN79 OASL 2-5-oligoadenylate synthase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 680.3856 2 680.385177 1358.7558 76220.4 0.88258 0.00060049 -0.27182 -0.00018494 0.61075 0.00041555 680.385201337187 685.890651256078 118.04 0.42998 118.04 117.81 118.24 0 72 17 6 0 0 0 0.0060504 2 69637 49.5 45.483 1 1.0601 0.89405 0 3030100 1206700 1823400 38432 911 14470 14867 60351;60352 60352 VPDALVFTIQTR 12 0 1 Unmodified _VPDALVFTIQTR_ 0 0 0 B3KN79;Q15646 B3KN79 B3KN79 OASL 2-5-oligoadenylate synthase-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 680.3854 2 680.385177 1358.7558 74667.35 0.5243 0.00035672 0.24752 0.00016841 0.77181 0.00052513 680.385836488287 685.389298243345 117.81 0.42169 117.81 117.6 118.02 0 73 20 5 0 0 0 0.021483 1 68598 38.634 34.48 1 1.0662 0.95272 0 2315400 1137600 1177800 38433 911 14470 14867 60353 60353 VPDEEENEESDNEK 14 1 0 Unmodified _VPDEEENEESDNEK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.8342 2 831.834293 1661.65403 70210.15 0.49624 0.00041279 -1.0441 -0.00086855 -0.54789 -0.00045575 831.833860711509 835.840276399243 17.011 0.25308 17.011 16.858 17.111 -1.9073E-06 25 8 5 0 0 0 0.02505 1 4216 32.523 29.791 1 0.85261 0.96553 0 1986900 1060900 926020 38434 1471 14471 14868 60354 60354 VPDGKPENEFAFNAEFK 17 2 0 Unmodified _VPDGKPENEFAFNAEFK_ 0 0 1 V9HWB5;Q15181 V9HWB5 V9HWB5 HEL-S-66p;PPA1 Inorganic pyrophosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 652.6566 3 646.979257 1937.91594 NaN NaN NaN -0.011961 -7.7382E-06 NaN NaN NaN NaN 80.696 0.64536 80.696 80.404 81.05 0 0 0 0 0.0016362 1 49143 56.851 51.747 1 NaN NaN 0 25545000 0 25545000 38435 1755 14472 14869 60355 60355 VPDNYGDEIAIELR 14 0 1 Unmodified _VPDNYGDEIAIELR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.4053 2 802.401752 1602.78895 NaN NaN NaN 0.2455 0.00019699 NaN NaN NaN NaN 99.6 0.57343 99.6 99.171 99.745 0 0 0 0 0.0013819 1 60966 71.548 71.548 1 NaN NaN 0 12575000 0 12575000 38436 231 14473 14870 60356 60356 VPDNYGDEIAIELR 14 0 1 Unmodified _VPDNYGDEIAIELR_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.4067 2 802.401752 1602.78895 67373.9 0.75196 0.00060338 0.60873 0.00048845 1.3607 0.0010918 802.903682561041 807.406033736335 98.771 0.67714 98.771 98.461 99.138 0 173 55 6 0 0 0 2.3835E-06 1 61785 105.65 86.904 1 1.816 1.7849 0 13539000 4244700 9294600 38437 231 14473 14870 60357 60357 VPDSTYEMIGGLDK 14 1 0 Oxidation (M) _VPDSTYEM(ox)IGGLDK_ VPDSTYEM(1)IGGLDK VPDSTYEM(40.48)IGGLDK 0 1 0 Q59GS3;A0A140VJS3;P62195;J3QLH6;J3KRP2;J3QSA9;J3QQM1;J3QRW1;J3QSE0 Q59GS3 Q59GS3 PSMC5 26S protease regulatory subunit 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.8718 2 770.863614 1539.71267 NaN NaN NaN 0.13136 0.00010126 NaN NaN NaN NaN 69.106 0.46246 69.106 68.819 69.282 0 0 0 0 0.011829 1 41034 40.475 26.318 1 NaN NaN 0 5945200 0 5945200 38438 608 14474 14871 60358 60358 461 VPDVQDGVR 9 0 1 Unmodified _VPDVQDGVR_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.764 2 492.759081 983.503609 88344.57 0.31639 0.0001559 0.66175 0.00032608 0.97814 0.00048199 492.759149506787 497.763275152851 32.473 0.51221 32.473 32.221 32.734 0 162 44 5 0 0 0 0.012314 2 16109 57.59 39.297 1 1.3193 1.3852 0 11843000 4719300 7124100 38439 1754 14475 14872 60359;60360 60359 VPDVQDGVR 9 0 1 Unmodified _VPDVQDGVR_ 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.7634 2 492.759081 983.503609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.997 1 31.997 31.497 32.497 0 0 0 0 0.043105 1 15907 48.794 27.847 1 38440 1754 14475 14872 60361 60361 VPEIEVTVEGPNNNNPQTSAVR 22 0 1 Unmodified _VPEIEVTVEGPNNNNPQTSAVR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1187.5951 2 1182.59313 2363.17172 57985.43 0.28331 0.00033504 -0.11789 -0.00013942 0.16542 0.00019563 1183.09409766925 1188.09914324004 84.48 0.40102 84.48 84.312 84.713 0 96 32 5 0 0 0 1.5034E-08 5 50619 100.41 100.41 1 1.0528 1.053 0 16860000 9013000 7846900 38441 789 14476 14873 60362;60363;60364;60365;60366 60365 VPEIEVTVEGPNNNNPQTSAVR 22 0 1 Unmodified _VPEIEVTVEGPNNNNPQTSAVR_ 0 0 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1183.0963 2 1182.59313 2363.17172 56871.75 0.20197 0.00023885 0.059896 7.0833E-05 0.26187 0.00030968 1183.09466639183 1188.09871741499 83.681 0.49698 83.681 83.437 83.934 0 130 40 6 0 0 0 6.5066E-08 3 51295 90.444 90.444 1 1.06 1.0439 0 14550000 6169200 8380500 38442 789 14476 14873 60367;60368;60369 60369 VPELFANR 8 0 1 Unmodified _VPELFANR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.763 2 473.261259 944.507966 86720.18 -0.024544 -1.1616E-05 0.42177 0.00019961 0.39722 0.00018799 473.261442824306 478.265398306977 64.865 0.96764 64.865 64.552 65.52 0 338 87 5 0 0 0 0.0031812 3 37468 97.602 70.806 1 0.74639 0.83108 0 80017000 44065000 35951000 38443 550 14477 14874 60370;60371;60372 60372 VPELFANR 8 0 1 Unmodified _VPELFANR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2614 2 473.261259 944.507966 86196.81 0.14137 6.6905E-05 0.58521 0.00027696 0.72658 0.00034386 473.261628312006 478.26547143895 63.562 1.0961 63.562 63.077 64.173 0 419 96 6 0 0 0 0.0083247 2 37491 79.116 60.385 1 0.70479 0.81448 0 69496000 41606000 27890000 38444 550 14477 14874 60373;60374 60374 VPELFANR 8 0 1 Unmodified _VPELFANR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.2662 2 473.261259 944.507966 87610.34 0.25497 0.00012067 0.57868 0.00027387 0.83366 0.00039454 473.261748202395 478.265357597801 74.223 1.3045 74.223 73.66 74.965 0 307 87 5 0 0 0 0.029728 2 38389 52.403 41.989 1 0.86581 0.72658 0 16891000 9299600 7591200 38445 550 14477 14874 60375;60376 60375 VPEPNENVGDAVQTK 15 1 0 Unmodified _VPEPNENVGDAVQTK_ 0 0 0 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.3954 2 798.896834 1595.77911 68215.05 0.74343 0.00059392 -0.1348 -0.00010769 0.60863 0.00048623 798.896846745672 802.903800069641 47.207 0.45475 47.207 46.971 47.426 0 154 42 5 0 0 0 3.1789E-10 2 25512 122.39 122.39 1 0.72229 0.77693 0 38639000 23206000 15433000 38446 1874 14478 14875 60377;60378 60378 VPEPNENVGDAVQTK 15 1 0 Unmodified _VPEPNENVGDAVQTK_ 0 0 0 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 799.3967 2 798.896834 1595.77911 NaN NaN NaN -0.15735 -0.00012571 NaN NaN NaN NaN 46.109 0.45751 46.109 45.912 46.369 0 0 0 0 1.2221E-05 1 25286 90.731 84.347 1 NaN NaN 0 14953000 14953000 0 38447 1874 14478 14875 60379 60379 VPEPNENVGDAVQTK 15 1 0 Unmodified _VPEPNENVGDAVQTK_ 0 0 0 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 798.8972 2 798.896834 1595.77911 68315.55 0.64964 0.00051899 -0.23797 -0.00019011 0.41167 0.00032888 798.896617580384 802.903902760796 54.864 0.50279 54.864 54.633 55.136 0 161 32 7 0 0 0 0.0046013 1 27380 38.769 38.769 1 1.1582 0.91546 0 5166000 2459800 2706200 38448 1874 14478 14875 60380 60380 VPEPNENVGDAVQTK 15 1 0 Unmodified _VPEPNENVGDAVQTK_ 0 0 0 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 798.897 2 798.896834 1595.77911 68776.18 0.47215 0.0003772 -0.37427 -0.000299 0.097881 7.8196E-05 798.896623739611 802.903687763795 55.515 0.50916 55.515 55.261 55.77 0 136 26 7 0 0 0 2.2982E-07 1 27230 107.99 107.99 1 1.1617 0.94776 0 4665400 2128100 2537300 38449 1874 14478 14875 60381 60381 VPEWVDTVK 9 1 0 Unmodified _VPEWVDTVK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.7877 2 536.787307 1071.56006 82703.31 0.62289 0.00033436 -0.3263 -0.00017515 0.29659 0.00015921 536.787372857428 540.793761598464 70.861 1.2495 70.861 70.329 71.579 0 414 100 8 0 0 0 0.0017929 2 41185 80.787 80.787 1 1.1052 1.2653 0 188600000 88113000 100480000 38450 811 14479 14876 60382;60383 60382 VPEWVDTVK 9 1 0 Unmodified _VPEWVDTVK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.7943 2 536.787307 1071.56006 82955.6 0.44315 0.00023788 -0.0081319 -4.3651E-06 0.43502 0.00023351 536.787320599595 540.79422495311 69.58 0.80928 69.58 69.293 70.102 0 336 66 8 0 0 0 0.0010561 2 41417 90.601 72.565 1 0.98432 1.1367 0 193500000 99900000 93599000 38451 811 14479 14876 60384;60385 60385 VPEWVDTVK 9 1 0 Unmodified _VPEWVDTVK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.7944 2 536.787307 1071.56006 83477.27 0.4631 0.00024858 0.048916 2.6258E-05 0.51201 0.00027484 536.787250572384 540.79428468145 80.995 0.51407 80.995 80.671 81.185 0 179 32 8 0 0 0 0.0047891 1 43794 68.371 47.071 1 1.2079 0.94061 0 12339000 5605100 6733700 38452 811 14479 14876 60386 60386 VPEWVDTVK 9 1 0 Unmodified _VPEWVDTVK_ 0 0 0 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 B0ZBD0 B0ZBD0 RPS19 40S ribosomal protein S19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 540.7943 2 536.787307 1071.56006 82726.27 0.64927 0.00034852 -0.087457 -4.6946E-05 0.56181 0.00030157 536.78710203376 540.79417785734 81.2 0.5487 81.2 80.95 81.498 0 173 33 8 0 0 0 0.023107 2 43060 48.794 32.931 1 1.2005 0.98551 0 9212700 4315800 4896900 38453 811 14479 14876 60387;60388 60387 VPFCPMVGSEVYSTEIK 17 1 0 Oxidation (M) _VPFCPM(ox)VGSEVYSTEIK_ VPFCPM(1)VGSEVYSTEIK VPFCPM(70.68)VGSEVYSTEIK 0 1 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 979.96 2 979.965545 1957.91654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.29 1 97.29 96.79 97.79 0 0 0 0 0.00016637 1 59341 70.685 57.484 1 38454 1076 14480 14877 60389 60389 830 VPFCPMVGSEVYSTEIK 17 1 0 Oxidation (M) _VPFCPM(ox)VGSEVYSTEIK_ VPFCPM(1)VGSEVYSTEIK VPFCPM(53.56)VGSEVYSTEIK 0 1 0 B5BUB1;Q9Y265;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 980.4695 2 979.965545 1957.91654 60632.55 0.32516 0.00031865 0.19061 0.00018679 0.51577 0.00050544 979.965889083846 984.474706987156 110.31 0.41051 110.31 110.12 110.53 7.6294E-06 128 21 9 0 0 0 7.8772E-05 1 63673 53.557 53.557 1 0.82877 0.66062 0 6807000 3799400 3007600 38455 1076 14480 14877 60390 60390 830 VPFIHVGNQVVSELGPIVQFVK 22 1 0 Unmodified _VPFIHVGNQVVSELGPIVQFVK_ 0 0 0 C9JNK6;C9JAZ1;B7Z9F3;O75431 C9JNK6 C9JNK6 MTX2 Metaxin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.7961 3 802.789644 2405.3471 68496.3 0.98669 0.00079211 -0.2097 -0.00016835 0.77699 0.00062376 803.12323208786 805.794966602141 132.94 0.27016 132.94 132.86 133.13 0 56 10 8 0 0 0 2.0926E-22 2 86911 118.46 118.46 1 1.2036 1.3332 0 58396000 24879000 33517000 38456 1107 14481 14878 60391;60392 60391 VPFIHVGNQVVSELGPIVQFVK 22 1 0 Unmodified _VPFIHVGNQVVSELGPIVQFVK_ 0 0 0 C9JNK6;C9JAZ1;B7Z9F3;O75431 C9JNK6 C9JNK6 MTX2 Metaxin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 803.1246 3 802.789644 2405.3471 68162.37 1.0033 0.00080543 0.10134 8.1358E-05 1.1046 0.00088678 803.124058522158 805.795369781 132.89 0.26393 132.89 132.79 133.05 0 106 13 12 0 0 0 2.0725E-37 2 89082 138.28 138.28 1 1.2197 1.3636 0 105620000 47019000 58603000 38457 1107 14481 14878 60393;60394 60394 VPFPLTLR 8 0 1 Unmodified _VPFPLTLR_ 0 0 0 Q9P0I2;C9JLM9 Q9P0I2 Q9P0I2 EMC3 ER membrane protein complex subunit 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.7923 2 471.792195 941.569838 NaN NaN NaN 0.313 0.00014767 NaN NaN NaN NaN 101.97 0.64235 101.97 101.57 102.22 -7.6294E-06 0 0 0 0.033405 1 64114 57.177 30.215 1 NaN NaN 0 10771000 10771000 0 38458 2092 14482 14879 60395 60395 VPFSLLR 7 0 1 Unmodified _VPFSLLR_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 421.2627 2 416.257988 830.501424 94271.44 0.33147 0.00013798 0.6138 0.0002555 0.94528 0.00039348 416.258030255292 421.262285100451 87.117 0.31891 87.117 87.021 87.34 0 99 27 6 0 0 0 0.024839 1 52568 89.673 30.033 1 1.4707 1.6356 0 75818000 31110000 44708000 38459 1443 14483 14880 60396 60396 VPFSLLR 7 0 1 Unmodified _VPFSLLR_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 416.2587 2 416.257988 830.501424 93213.06 0.37173 0.00015473 0.73225 0.00030481 1.104 0.00045954 416.258060702734 421.262297862063 85.979 0.22655 85.979 85.892 86.119 0 79 17 7 0 0 0 1.3046E-06 2 53005 153.67 62.579 1 1.4249 1.6228 0 107160000 44937000 62223000 38460 1443 14483 14880 60397;60398 60398 VPGLPTPIENMILR 14 0 1 Oxidation (M) _VPGLPTPIENM(ox)ILR_ VPGLPTPIENM(1)ILR VPGLPTPIENM(44.19)ILR 0 1 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.9448 2 783.439626 1564.8647 NaN NaN NaN 0.78977 0.00061874 NaN NaN NaN NaN 110.17 0.29372 110.17 110 110.3 0 0 0 0 0.0067472 1 70914 44.188 23.884 1 NaN NaN 0 4983500 4983500 0 38461 1854 14484 14881 60399 60399 1716 VPGVTAIDLDEDTCTFHIYGEDQDAVK 27 1 0 Unmodified _VPGVTAIDLDEDTCTFHIYGEDQDAVK_ 0 0 0 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3;A0A0K0MJ24;Q8IXW7;A0A087WY29;A0A087WWR6 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1006.806 3 1003.46584 3007.3757 NaN NaN NaN -0.019705 -1.9773E-05 NaN NaN NaN NaN 109.74 0.2924 109.74 109.59 109.88 7.6294E-06 0 0 0 0.044061 1 70526 23.246 17.085 1 NaN NaN 0 9310200 0 9310200 38462 1689 14485 14882 60400 60400 VPGVTAIELGEETCTFR 17 0 1 Unmodified _VPGVTAIELGEETCTFR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 944.9697 2 939.966933 1877.91931 63341.19 0.81527 0.00076633 -0.41903 -0.00039387 0.39625 0.00037246 940.468149169232 944.971306697004 105.23 0.63236 105.23 104.96 105.59 7.6294E-06 126 46 5 0 0 0 3.1282E-09 2 66746 107.17 99.255 1 0.74217 0.73642 0 15955000 9264500 6690900 38463 1593 14486 14883 60401;60402 60402 VPGVTDCVAEIQK 13 1 0 Unmodified _VPGVTDCVAEIQK_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.3643 2 708.363584 1414.71262 NaN NaN NaN 0.46157 0.00032696 NaN NaN NaN NaN 67.793 0.35906 67.793 67.583 67.942 0 0 0 0 0.00077554 1 39187 79.659 59.355 1 NaN NaN 0 8045200 8045200 0 38464 1224 14487 14884 60403 60403 VPIWDQDIQFLPGSQK 16 1 0 Unmodified _VPIWDQDIQFLPGSQK_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 936.4922 2 935.988526 1869.9625 60798.67 1.2683 0.0011872 -0.75724 -0.00070876 0.51111 0.00047839 936.490528466842 939.995382064439 118.43 0.92886 118.43 118.16 119.09 0 207 53 9 0 0 0 4.6766E-34 1 75951 159.52 149.97 1 0.76167 0.82664 0 45745000 26895000 18849000 38465 1859 14488 14885 60404 60404 VPIWDQDIQFLPGSQK 16 1 0 Unmodified _VPIWDQDIQFLPGSQK_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 936.4918 2 935.988526 1869.9625 60222.54 0.8241 0.00077135 0.045445 4.2536E-05 0.86954 0.00081388 936.490334921309 939.995906938786 117.99 0.763 117.99 117.76 118.52 0 238 50 9 0 0 0 1.1178E-24 2 77498 142.85 127.98 1 0.79932 0.89301 0 53009000 28256000 24754000 38466 1859 14488 14885 60405;60406 60405 VPIWDQDIQFLPGSQK 16 1 0 Unmodified _VPIWDQDIQFLPGSQK_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 939.9958 2 935.988526 1869.9625 62112.24 0.66182 0.00061945 -0.58786 -0.00055023 0.073958 6.9224E-05 936.487460324168 939.995625441485 130.38 0.61624 130.38 130.11 130.73 0 163 30 7 0 0 0 5.0933E-12 1 79073 115.12 101.69 1 0.95332 0.76399 0 20989000 10374000 10614000 38467 1859 14488 14885 60407 60407 VPIWDQDIQFLPGSQK 16 1 0 Unmodified _VPIWDQDIQFLPGSQK_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 940.4968 2 935.988526 1869.9625 62003.93 0.9809 0.00091811 -1.0032 -0.00093902 -0.02234 -2.091E-05 936.486995897101 939.995454992975 130.17 0.7453 130.17 129.91 130.66 0 147 29 8 0 0 0 1.5158E-24 1 77994 140.1 132.49 1 0.99592 0.79774 0 21703000 10944000 10759000 38468 1859 14488 14885 60408 60408 VPKPEPIPEPK 11 2 0 Unmodified _VPKPEPIPEPK_ 0 0 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 410.9072 3 410.907934 1229.70197 96179.32 0.0048889 2.0089E-06 -0.34124 -0.00014022 -0.33635 -0.00013821 410.907907568285 416.250302897777 38.265 0.57401 38.265 37.971 38.545 0 135 45 6 0 0 0 0.021326 1 20025 29.341 25.808 1 1.0279 1.1844 0 27532000 12700000 14832000 38469 570 14489 14886 60409 60409 VPLDEALQR 9 0 1 Unmodified _VPLDEALQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.7904 2 520.790381 1039.56621 84622.16 0.48523 0.00025271 -0.45173 -0.00023526 0.033505 1.7449E-05 520.790087624981 525.793851914134 57.016 0.90646 57.016 56.434 57.34 0 289 74 8 0 0 0 0.014775 2 32111 55.37 38.325 1 1.7018 1.8755 0 55109000 20209000 34901000 38470 1754 14490 14887 60410;60411 60411 VPLDEALQR 9 0 1 Unmodified _VPLDEALQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.7903 2 520.790381 1039.56621 84259.11 0.25089 0.00013066 -0.0098575 -5.1337E-06 0.24103 0.00012553 520.79030216615 525.79429007715 56.044 0.93032 56.044 55.523 56.453 -3.8147E-06 315 72 8 0 0 0 0.0055856 2 32100 66.351 51.569 1 1.6168 1.8557 0 80009000 29849000 50160000 38471 1754 14490 14887 60412;60413 60413 VPLDEALQR 9 0 1 Unmodified _VPLDEALQR_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.7944 2 520.790381 1039.56621 83987.48 0.46378 0.00024153 0.085954 4.4764E-05 0.54974 0.0002863 520.790408935795 525.794296472333 65.771 0.78291 65.771 65.421 66.204 0 192 56 5 0 0 0 0.019553 1 33960 51.059 33.674 1 1.9136 1.6192 0 2961400 1021400 1940000 38472 1754 14490 14887 60414 60414 VPLDVACAR 9 0 1 Unmodified _VPLDVACAR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.7648 2 500.765852 999.51715 84875.9 0.34412 0.00017232 -0.43881 -0.00021974 -0.094685 -4.7415E-05 500.765244932317 505.769799228685 49.115 0.57714 49.115 48.78 49.357 3.8147E-06 165 44 6 0 0 0 0.0066845 2 26892 63.565 56.335 1 1.637 1.8064 0 55554000 18757000 36797000 38473 1754 14491 14888 60415;60416 60416 VPLDVACAR 9 0 1 Unmodified _VPLDVACAR_ 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 505.7704 2 500.765852 999.51715 85323.73 0.25775 0.00012907 0.25344 0.00012691 0.51118 0.00025598 500.765612534514 505.770134655367 56.307 0.49889 56.307 56.03 56.529 0 84 32 4 0 0 0 0.019553 1 27689 51.059 33.211 1 2.5273 2.2848 0 2204000 577100 1626900 38474 1754 14491 14888 60417 60417 VPLENNYLK 9 1 0 Unmodified _VPLENNYLK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.8086 2 545.300581 1088.58661 85966.61 0.87407 0.00047663 0.64522 0.00035184 1.5193 0.00082847 545.301475533074 549.30860570577 59.823 0.27798 59.823 59.67 59.948 0 66 23 4 0 0 0 0.0036023 1 34146 71.379 52.401 1 0.71514 0.70247 0 20255000 11823000 8432100 38475 1928 14492 14889 60418 60418 VPLENNYLK 9 1 0 Unmodified _VPLENNYLK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.3107 2 545.300581 1088.58661 85337.95 0.83064 0.00045295 1.0706 0.0005838 1.9012 0.0010368 545.301537755724 549.308883713671 58.573 0.25999 58.573 58.463 58.723 0 81 25 5 0 0 0 0.0078663 1 34105 61.602 42.508 1 0.79014 0.85184 0 21738000 11241000 10497000 38476 1928 14492 14889 60419 60419 VPLENNYLK 9 1 0 Unmodified _VPLENNYLK_ 0 0 0 Q8NG31;H0YCZ2 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.8094 2 545.300581 1088.58661 86449.66 0.38437 0.0002096 1.0067 0.00054896 1.3911 0.00075855 545.301232481852 549.308907432067 69.574 0.25647 69.574 69.45 69.707 0 69 21 4 0 0 0 0.034146 1 36538 44.377 33.156 1 1.2846 1.0183 0 4740600 2016500 2724100 38477 1928 14492 14889 60420 60420 VPLGTFR 7 0 1 Unmodified _VPLGTFR_ 0 0 0 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 395.2344 2 395.234513 788.454474 NaN NaN NaN -0.2584 -0.00010213 NaN NaN NaN NaN 50.909 0.32193 50.909 50.756 51.078 0 0 0 0 0.05173 1 28840 57.471 26.897 1 NaN NaN 0 6746100 6746100 0 38478 2154 14493 14890 60421 60421 VPLHQVPYAVK 11 1 0 Unmodified _VPLHQVPYAVK_ 0 0 0 Q9H6R4;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.58 3 417.580041 1249.71829 93175.77 0.14974 6.2528E-05 0.17039 7.1149E-05 0.32012 0.00013368 417.580002447085 420.251467565569 47.119 0.52309 47.119 46.936 47.459 -3.8147E-06 226 40 8 0 0 0 9.3609E-05 2 26102 75.197 75.197 1 1.0684 1.2011 0 118890000 56036000 62858000 38479 2038 14494 14891 60422;60423 60423 VPLHQVPYAVK 11 1 0 Unmodified _VPLHQVPYAVK_ 0 0 0 Q9H6R4;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 417.5801 3 417.580041 1249.71829 93114.35 -0.21185 -8.8465E-05 0.25399 0.00010606 0.04214 1.7597E-05 417.580090976539 420.251526320069 56.261 1.0035 56.261 55.59 56.594 0 248 63 8 0 0 0 0.014115 1 28273 26.412 26.412 1 1.4944 1.1613 0 15187000 5931100 9256100 38480 2038 14494 14891 60424 60424 VPLLLHQK 8 1 0 Unmodified _VPLLLHQK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.3055 2 474.30547 946.596387 88094.91 0.2421 0.00011483 0.057427 2.7238E-05 0.29953 0.00014207 474.305359337063 478.312535489225 42.485 0.27502 42.485 42.317 42.592 0 88 21 6 0 0 0 0.0099652 2 22547 85.89 53.419 1 0.65966 0.70924 0 38842000 24647000 14195000 38481 44 14495 14892 60425;60426 60425 VPLLLHQK 8 1 0 Unmodified _VPLLLHQK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 319.2106 3 316.539405 946.596387 108833.4 0.10166 3.218E-05 -0.076413 -2.4188E-05 0.025248 7.9919E-06 316.539286376906 319.210695310398 42.484 0.25222 42.484 42.327 42.579 0 66 19 5 0 0 0 0.026906 1 22551 34.089 19.931 1 0.85476 0.84961 0 26118000 15131000 10987000 38482 44 14495 14892 60427 60427 VPLLLHQK 8 1 0 Unmodified _VPLLLHQK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.3052 2 474.30547 946.596387 89154.13 0.21178 0.00010045 0.12785 6.0641E-05 0.33963 0.00016109 474.305349467684 478.312525012976 40.719 0.257 40.719 40.556 40.813 0 77 17 6 0 0 0 0.012238 1 21749 73.039 34.801 1 0.6701 0.75383 0 56548000 33337000 23212000 38483 44 14495 14892 60428 60428 VPLLLHQK 8 1 0 Unmodified _VPLLLHQK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 316.54 3 316.539405 946.596387 106879.9 0.28214 8.9308E-05 -0.17345 -5.4905E-05 0.10869 3.4403E-05 316.539299733451 319.210701428196 40.719 0.24543 40.719 40.568 40.813 0 59 16 5 0 0 0 0.0092129 1 21763 52.268 34.711 1 0.70272 0.71096 0 28952000 17061000 11892000 38484 44 14495 14892 60429 60429 VPLLLHQK 8 1 0 Unmodified _VPLLLHQK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.3127 2 474.30547 946.596387 88860.19 -0.018961 -8.9932E-06 0.28362 0.00013452 0.26466 0.00012553 474.305392074203 478.312618558073 47.221 0.38745 47.221 47.034 47.422 0 102 30 4 0 0 0 0.022432 1 22303 64.803 45.167 1 1.6507 1.3354 0 2970900 1275300 1695600 38485 44 14495 14892 60430 60430 VPLSAYER 8 0 1 Unmodified _VPLSAYER_ 0 0 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.7572 2 467.753267 933.491981 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.125 1 39.125 38.625 39.625 3.8147E-06 0 0 0 0.04963 1 20669 54.776 17.683 1 38486 619 14496 14893 60431 60431 VPLSEFDFSWSK 12 1 0 Unmodified _VPLSEFDFSWSK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 725.3615 2 721.353542 1440.69253 71286.88 0.95677 0.00069017 -0.015655 -1.1293E-05 0.94112 0.00067888 721.353262877777 725.360727385404 113.38 1.129 113.38 113.1 114.23 0 428 83 9 0 0 0 4.5357E-08 2 71722 115.18 106.22 1 0.81564 0.91934 0 127750000 66661000 61085000 38487 303 14497 14894 60432;60433 60433 VPLSEFDFSWSK 12 1 0 Unmodified _VPLSEFDFSWSK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 725.3612 2 721.353542 1440.69253 71199.62 0.73009 0.00052666 0.059053 4.2598E-05 0.78915 0.00056925 721.353331963246 725.360678364128 112.81 1.1483 112.81 112.46 113.61 0 368 79 9 0 0 0 1.6936E-05 2 73035 104.82 95.866 1 0.80489 0.90097 0 109850000 59125000 50724000 38488 303 14497 14894 60434;60435 60435 VPLSEFDFSWSK 12 1 0 Unmodified _VPLSEFDFSWSK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.3547 2 721.353542 1440.69253 70818.47 0.87675 0.00063245 -0.078009 -5.6272E-05 0.79874 0.00057617 721.353526749665 725.360709868356 124.42 1.3074 124.42 124.07 125.38 0 277 55 11 0 0 0 2.5406E-05 2 74425 100.88 93.233 1 1.6042 1.371 0 67635000 26779000 40857000 38489 303 14497 14894 60436;60437 60437 VPLSEFDFSWSK 12 1 0 Unmodified _VPLSEFDFSWSK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.3536 2 721.353542 1440.69253 71268.91 0.8144 0.00058747 0.0016771 1.2098E-06 0.81608 0.00058868 721.353503717362 725.360673659935 124.24 0.94405 124.24 123.89 124.83 0 249 40 10 0 0 0 6.6834E-05 2 73389 97.734 91.953 1 1.6031 1.3494 0 52253000 19893000 32360000 38490 303 14497 14894 60438;60439 60439 VPLTSNDDEDEDK 13 1 0 Unmodified _VPLTSNDDEDEDK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.8225 2 738.820458 1475.62636 71420.59 0.90942 0.0006719 -0.062578 -4.6234E-05 0.84684 0.00062566 738.82032321516 742.82748568348 26.267 0.42071 26.267 25.982 26.403 0 114 25 6 0 0 0 5.1231E-30 2 11692 163.46 146.55 1 1.063 1.0418 0 20996000 9290200 11706000 38491 1795 14498 14895 60440;60441 60441 VPLTSNDDEDEDK 13 1 0 Unmodified _VPLTSNDDEDEDK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 743.3284 2 738.820458 1475.62636 70767.03 0.96159 0.00071044 -0.31054 -0.00022943 0.65105 0.00048101 738.820188119144 742.827386399158 25.955 0.3242 25.955 25.781 26.105 0 106 20 8 0 0 0 1.158E-08 1 11387 113.47 106.94 1 1.0963 1.2033 0 41415000 20104000 21312000 38492 1795 14498 14895 60442 60442 VPLTSNDDEDEDK 13 1 0 Unmodified _VPLTSNDDEDEDK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 739.3221 2 738.820458 1475.62636 70954.98 0.4961 0.00036653 0.0032846 2.4267E-06 0.49938 0.00036895 738.820638146305 742.827399739138 29.542 0.57764 29.542 29.237 29.814 0 205 39 6 0 0 0 0.0078833 2 12063 44.564 42.623 1 1.7595 1.3942 0 4847800 1767600 3080200 38493 1795 14498 14895 60443;60444 60444 VPNEEDPSLDRPFISEGTTLK 21 1 1 Unmodified _VPNEEDPSLDRPFISEGTTLK_ 0 0 1 F8VRH6;F8VVC4;H0YHS4;F8W0K6;F8W1R9;B4DY26;B4DXN7;Q5T7S2;P36897 F8VRH6 F8VRH6 TGFBR1 Receptor protein serine/threonine kinase;TGF-beta receptor type-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.0676 3 782.060417 2343.15942 NaN NaN NaN -0.017686 -1.3832E-05 NaN NaN NaN NaN 85.246 0.54276 85.247 84.969 85.512 7.6294E-06 0 0 0 0.023827 1 52387 29.84 17.712 1 NaN NaN 0 9000300 0 9000300 38494 1048 14499 14896 60445 60445 VPNEEDPSLDRPFISEGTTLK 21 1 1 Unmodified _VPNEEDPSLDRPFISEGTTLK_ 0 0 1 F8VRH6;F8VVC4;H0YHS4;F8W0K6;F8W1R9;B4DY26;B4DXN7;Q5T7S2;P36897 F8VRH6 F8VRH6 TGFBR1 Receptor protein serine/threonine kinase;TGF-beta receptor type-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.0683 3 782.060417 2343.15942 70338.23 0.72497 0.00056697 -0.10848 -8.484E-05 0.61649 0.00048213 782.394855205695 788.067754447709 98.612 0.38647 98.612 98.399 98.785 0 85 23 5 0 0 0 0.043302 1 54800 16.299 8.5874 1 1.5786 1.3611 0 1999200 743690 1255500 38495 1048 14499 14896 60446 60446 VPNSNPPEYEFFWGLR 16 0 1 Unmodified _VPNSNPPEYEFFWGLR_ 0 0 0 Q5H909;A0A024R9Y7;Q9UNF1;Q5H907;B4DX55 Q5H909 Q5H909 MAGED2 Melanoma-associated antigen D2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.4774 2 976.4705 1950.92645 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.25 1 120.25 119.75 120.75 0 0 0 0 0.04493 1 79419 39.266 26.705 1 38496 292 14500 14897 60447 60447 VPPAINQFTQALDR 14 0 1 Unmodified _VPPAINQFTQALDR_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 790.4279 2 785.422822 1568.83109 67949.88 0.70239 0.00055168 -0.0076311 -5.9936E-06 0.69476 0.00054568 785.422969998089 790.426906297418 105.85 1.3489 105.85 105.34 106.69 0 739 99 11 0 0 0 5.3108E-30 5 65353 159.94 142.13 1 0.85872 1.0188 0 686450000 369580000 316870000 38497 1648 14501 14898 60448;60449;60450;60451;60452 60449 VPPAINQFTQALDR 14 0 1 Unmodified _VPPAINQFTQALDR_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 790.4279 2 785.422822 1568.83109 68145.57 0.84471 0.00066346 -0.089069 -6.9957E-05 0.75564 0.0005935 785.422957758865 790.426851852892 105.26 1.2832 105.26 104.57 105.86 0 761 96 11 0 0 0 9.3573E-06 3 66418 99.283 87.417 1 0.87216 1.0263 0 1018600000 561210000 457390000 38498 1648 14501 14898 60453;60454;60455 60453 VPPAINQFTQALDR 14 0 1 Unmodified _VPPAINQFTQALDR_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 785.9249 2 785.422822 1568.83109 68016.73 0.68898 0.00054114 0.088922 6.9842E-05 0.7779 0.00061098 785.423103639353 790.427004207427 117.52 1.5879 117.52 117 118.59 0 438 68 10 0 0 0 0.00085746 4 69580 57.836 52.112 1 0.79402 0.68864 0 184670000 102390000 82282000 38499 1648 14501 14898 60456;60457;60458;60459 60458 VPPAINQFTQALDR 14 0 1 Unmodified _VPPAINQFTQALDR_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 790.4281 2 785.422822 1568.83109 68589.62 0.62616 0.0004918 0.031858 2.5022E-05 0.65801 0.00051682 785.423070585815 790.426919397391 117.34 1.8766 117.34 116.68 118.56 7.6294E-06 484 87 11 0 0 0 0.00015607 3 67935 75.739 60.767 1 0.79894 0.69781 0 196600000 111150000 85448000 38500 1648 14501 14898 60460;60461;60462 60460 VPPFTFHVK 9 1 0 Unmodified _VPPFTFHVK_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 360.5423 3 357.871044 1070.5913 100019.4 0.056885 2.0358E-05 -0.066279 -2.372E-05 -0.0093942 -3.3619E-06 357.870957208225 360.542379410948 72.155 0.96677 72.155 71.632 72.598 0 295 76 6 0 0 0 0.013825 2 42157 40.994 37.293 1 0.99156 0.97152 0 21484000 10612000 10872000 38501 1017 14502 14899 60463;60464 60464 VPPFTFHVK 9 1 0 Unmodified _VPPFTFHVK_ 0 0 0 B4DPZ5;B4DNU9;Q6NZI2;B3KRY5 B4DPZ5 B4DPZ5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 360.5424 3 357.871044 1070.5913 100143.4 0.24128 8.6348E-05 -0.40888 -0.00014633 -0.1676 -5.998E-05 357.870854984009 360.542258912685 69.93 1.2637 69.93 69.091 70.354 0 307 105 5 0 0 0 0.022602 1 41717 33.922 31.07 1 0.96363 1.041 0 22572000 12155000 10416000 38502 1017 14502 14899 60465 60465 VPPFVDLNVNSNEGK 15 1 0 Unmodified _VPPFVDLNVNSNEGK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 814.9195 2 814.917569 1627.82059 66960.2 0.73693 0.00060054 -0.054939 -4.4771E-05 0.68199 0.00055577 814.917482421491 818.924387451638 94.237 1.403 94.237 93.598 95.001 0 758 129 8 0 0 0 3.4688E-06 1 57020 97.911 88.723 1 1.0429 1.2081 0 235770000 112060000 123710000 38503 303 14503 14900 60466 60466 VPPFVDLNVNSNEGK 15 1 0 Unmodified _VPPFVDLNVNSNEGK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.4206 2 814.917569 1627.82059 66834.83 0.67659 0.00055136 0.089493 7.2929E-05 0.76608 0.00062429 814.917549182848 818.924386674001 93.652 1.4312 93.652 92.897 94.328 0 709 126 8 0 0 0 2.5736E-10 2 57839 118.61 118.61 1 1.0035 1.1753 0 311750000 159830000 151920000 38504 303 14503 14900 60467;60468 60468 VPPFVDLNVNSNEGK 15 1 0 Unmodified _VPPFVDLNVNSNEGK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 818.9257 2 814.917569 1627.82059 66711.7 0.77383 0.0006306 -0.062761 -5.1145E-05 0.71107 0.00057946 814.917599844691 818.924549983302 107.35 1.4454 107.35 106.89 108.34 0 468 83 10 0 0 0 3.7462E-07 2 61271 105.03 105.03 1 1.542 1.3217 0 76823000 30927000 45896000 38505 303 14503 14900 60469;60470 60469 VPPFVDLNVNSNEGK 15 1 0 Unmodified _VPPFVDLNVNSNEGK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 818.9265 2 814.917569 1627.82059 67701.2 0.70065 0.00057097 0.025454 2.0743E-05 0.72611 0.00059172 814.917652474917 818.924604398394 107.17 1.5025 107.17 106.67 108.18 0 569 90 10 0 0 0 4.5246E-07 3 60745 103.44 103.44 1 1.4981 1.2744 0 80331000 31875000 48455000 38506 303 14503 14900 60471;60472;60473 60473 VPPPPPIAR 9 0 1 Unmodified _VPPPPPIAR_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.2897 2 472.28982 942.565087 88098.38 0.20533 9.6977E-05 -0.057207 -2.7018E-05 0.14813 6.9958E-05 472.289683744943 477.293799857546 47.307 0.70076 47.307 46.673 47.374 3.8147E-06 274 66 6 0 0 0 0.030795 1 25439 45.718 45.718 1 1.1095 1.3124 0 296770000 137160000 159610000 38507 837;781 14504 14901 60474 60474 VPPPPPIAR 9 0 1 Unmodified _VPPPPPIAR_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.2898 2 472.28982 942.565087 88098.38 0.19095 9.0186E-05 0.010378 4.9015E-06 0.20133 9.5087E-05 472.289715986459 477.293785548993 47.702 0.17545 47.702 47.616 47.791 0 109 15 8 0 0 0 0.000594 1 25930 97.071 97.071 1 1.097 1.2926 0 239890000 119160000 120740000 38508 837;781 14504 14901 60475 60475 VPPPPPIAR 9 0 1 Unmodified _VPPPPPIAR_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.2939 2 472.28982 942.565087 88568.01 0.26928 0.00012718 0.17733 8.3751E-05 0.44661 0.00021093 472.289834723949 477.293860586701 47.933 0.65453 47.933 47.782 48.436 0 195 56 7 0 0 0 0.014064 1 26156 56.011 48.781 1 1.0734 1.2485 0 183450000 90280000 93173000 38509 837;781 14504 14901 60476 60476 VPPPPPIAR 9 0 1 Unmodified _VPPPPPIAR_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.2897 2 472.28982 942.565087 88098.38 0.3393 0.00016025 -0.051949 -2.4535E-05 0.28735 0.00013571 472.289691039529 477.293786633579 48.54 0.48976 48.54 48.404 48.894 3.8147E-06 131 35 6 0 0 0 0.004769 1 26436 68.422 63.74 1 0.92491 1.0256 0 66575000 31027000 35548000 38510 837;781 14504 14901 60477 60477 VPPPPPIAR 9 0 1 Unmodified _VPPPPPIAR_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.2948 2 472.28982 942.565087 88567.99 0.39913 0.0001885 0.022769 1.0753E-05 0.4219 0.00019926 472.289718701825 477.293879756302 48.802 0.65656 48.802 48.627 49.283 0 102 49 5 0 0 0 0.010771 1 26796 58.981 50.209 1 1.0068 1.069 0 42283000 21608000 20674000 38511 837;781 14504 14901 60478 60478 VPPPPPIAR 9 0 1 Unmodified _VPPPPPIAR_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.2939 2 472.28982 942.565087 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.066 1 47.066 46.566 47.566 0 0 0 0 0.048466 1 25491 47.067 29.031 1 38512 837;781 14504 14901 60479 60479 VPPPPPIAR 9 0 1 Unmodified _VPPPPPIAR_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.2893 2 472.28982 942.565087 87229.71 0.26453 0.00012493 0.0064282 3.036E-06 0.27096 0.00012797 472.289728559734 477.293809325917 46.334 1.5395 46.334 45.628 47.168 0 700 129 8 0 0 0 0.0010287 4 25868 90.986 84.947 1 1.1175 1.2985 0 366530000 175810000 190720000 38513 837;781 14504 14901 60480;60481;60482;60483 60482 VPPPPPIAR 9 0 1 Unmodified _VPPPPPIAR_ 0 0 0 G3V576;B2R603;G3V2Q1;A8K9A4;P07910;G3V555;G3V575;D3DPI2;G3V5V7;B4DQQ2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;G3V2D6 G3V576;G3V4W0 G3V4W0 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 472.2896 2 472.28982 942.565087 88355.27 0.18972 8.9601E-05 -0.12385 -5.8494E-05 0.065866 3.1108E-05 472.289585942229 477.293786442606 47.22 1.0309 47.22 47.158 48.189 0 265 72 5 0 0 0 0.002405 1 26437 74.415 63.542 1 1.0379 1.1816 0 129370000 66432000 62935000 38514 837;781 14504 14901 60484 60484 VPPSLLCEINTNAR 14 0 1 Unmodified _VPPSLLCEINTNAR_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.4196 2 792.41414 1582.81373 68346.83 1.034 0.00081936 0.16349 0.00012955 1.1975 0.00094891 792.415182781243 797.418284877982 91.338 0.44749 91.338 91.096 91.543 7.6294E-06 126 35 6 0 0 0 0.00024365 4 55246 77.593 66.061 1 0.80322 0.80827 0 17408000 9400300 8007900 38515 580 14505 14902 60485;60486;60487;60488 60488 VPPSLLCEINTNAR 14 0 1 Unmodified _VPPSLLCEINTNAR_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.9159 2 792.41414 1582.81373 67543.85 1.3818 0.001095 -0.46224 -0.00036628 0.91959 0.0007287 792.413804387904 797.417963629688 90.442 0.44761 90.442 90.207 90.655 -7.6294E-06 157 38 6 0 0 0 0.0023711 1 55870 48.948 42.845 1 0.8496 0.88778 0 22541000 13710000 8831700 38516 580 14505 14902 60489 60489 VPPSLLCEINTNAR 14 0 1 Unmodified _VPPSLLCEINTNAR_ 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 797.9191 2 792.41414 1582.81373 68689.29 0.66812 0.00052943 -0.3441 -0.00027267 0.32402 0.00025676 792.413498849265 797.418040724232 104.81 0.63393 104.81 104.49 105.13 0 163 35 7 0 0 0 0.020543 1 59663 43.544 43.544 1 1.3915 1.1647 0 3930300 1735900 2194400 38517 580 14505 14902 60490 60490 VPQFSFSR 8 0 1 Unmodified _VPQFSFSR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.2533 2 484.253434 966.492316 94917.93 0.037962 1.8383E-05 -0.52783 -0.0002556 -0.48987 -0.00023722 484.25295660801 489.257692395657 68.949 0.56078 68.949 68.536 69.096 0 167 48 6 0 0 0 0.017078 1 39901 60.682 41.951 1 0.93082 0.9538 0 6566300 4094900 2471400 38518 1259 14506 14903 60491 60491 VPQVSTPTLVEVSR 14 0 1 Unmodified _VPQVSTPTLVEVSR_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.425 2 756.42503 1510.83551 NaN NaN NaN -0.1506 -0.00011392 NaN NaN NaN NaN 86.208 0.5534 86.208 85.882 86.435 0 0 0 0 0.0029928 1 53008 63.727 45.055 1 NaN NaN 0 15302000 15302000 0 + 38519 1153 14507 14904 60492 60492 VPQVSTPTLVEVSR 14 0 1 Unmodified _VPQVSTPTLVEVSR_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.9265 2 756.42503 1510.83551 NaN NaN NaN 0.012122 9.1693E-06 NaN NaN NaN NaN 99.674 0.4646 99.674 99.46 99.925 0 0 0 0 0.0064674 1 56401 54.471 44.784 1 NaN NaN 0 2723500 2723500 0 + 38520 1153 14507 14904 60493 60493 VPQVSTPTLVEVSR 14 0 1 Unmodified _VPQVSTPTLVEVSR_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 756.4254 2 756.42503 1510.83551 NaN NaN NaN 0.36671 0.00027739 NaN NaN NaN NaN 99.591 0.47214 99.591 99.311 99.783 -7.6294E-06 0 0 0 0.0064674 1 55474 54.471 41.515 1 NaN NaN 0 2435200 2435200 0 + 38521 1153 14507 14904 60494 60494 VPSENVLGEVGSGFK 15 1 0 Unmodified _VPSENVLGEVGSGFK_ 0 0 0 Q53HR2;B4DEA8;P49748;B3KPA6;B3KPX1;A0A077H1I5 Q53HR2 Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 759.8942 2 759.893563 1517.77257 71452.67 0.69174 0.00052565 -0.21801 -0.00016566 0.47373 0.00035999 759.893699753546 763.900016379392 107.39 0.61015 107.39 107.08 107.69 -7.6294E-06 164 42 6 0 0 0 9.8544E-05 1 60596 82.543 67.667 1 0.86629 0.70847 0 5529100 2858900 2670100 38522 965 14508 14905 60495 60495 VPSFAAGR 8 0 1 Unmodified _VPSFAAGR_ 0 0 0 O00425 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 407.7255 2 402.72177 803.428987 NaN NaN NaN -0.89973 -0.00036234 NaN NaN NaN NaN 34.346 0.21994 34.346 34.176 34.395 0 0 0 0 0.03914 1 17401 54.205 19.056 1 NaN NaN 0 5501500 0 5501500 38523 1364 14509 14906 60496 60496 VPSLTTVPQTQGQTTAQK 18 1 0 Unmodified _VPSLTTVPQTQGQTTAQK_ 0 0 0 A0A024RCS7;Q9BW19;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.0042 2 943.004904 1883.99526 62845.85 0.41965 0.00039573 0.0083878 7.9097E-06 0.42804 0.00040364 943.004743686988 947.51344232264 59.092 0.6156 59.092 58.745 59.36 0 210 49 7 0 0 0 0.0025592 2 33439 40.767 40.767 1 0.87789 0.90343 0 17424000 8216900 9207200 38524 371 14510 14907 60497;60498 60498 VPSLTTVPQTQGQTTAQK 18 1 0 Unmodified _VPSLTTVPQTQGQTTAQK_ 0 0 0 A0A024RCS7;Q9BW19;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.0056 2 943.004904 1883.99526 62741.34 0.49965 0.00047118 -0.12049 -0.00011362 0.37917 0.00035756 943.50661169495 947.513329218586 58.055 0.4861 58.055 57.802 58.288 3.8147E-06 146 38 5 0 0 0 3.8683E-06 2 33570 84.605 84.605 1 0.8607 0.90241 0 19507000 9039800 10467000 38525 371 14510 14907 60499;60500 60500 VPSLTTVPQTQGQTTAQK 18 1 0 Unmodified _VPSLTTVPQTQGQTTAQK_ 0 0 0 A0A024RCS7;Q9BW19;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 947.0129 2 943.004904 1883.99526 63431.73 0.45797 0.00043187 -0.070941 -6.6898E-05 0.38703 0.00036497 943.506265934363 947.012008108459 68.82 0.44949 68.82 68.579 69.028 0 206 33 8 0 0 0 0.015264 1 35942 36 36 1 1.6751 1.3246 0 5107700 2456200 2651500 38526 371 14510 14907 60501 60501 VPSLTTVPQTQGQTTAQK 18 1 0 Unmodified _VPSLTTVPQTQGQTTAQK_ 0 0 0 A0A024RCS7;Q9BW19;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 947.5135 2 943.004904 1883.99526 63952.99 0.55966 0.00052776 -0.15495 -0.00014612 0.40471 0.00038165 943.506060876444 947.012150947085 69.35 0.46133 69.35 69.141 69.602 0 171 30 8 0 0 0 0.0062285 1 35518 43.991 43.991 1 1.7884 1.4623 0 4777300 1984800 2792600 38527 371 14510 14907 60502 60502 VPSPPDEHQEAENAVSSGNR 20 0 1 Unmodified _VPSPPDEHQEAENAVSSGNR_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.3273 3 707.326156 2118.95664 NaN NaN NaN 0.25384 0.00017955 NaN NaN NaN NaN 35.067 0.38243 35.067 34.889 35.272 0 0 0 0 1.1972E-07 1 17544 61.767 53.167 1 NaN NaN 0 4518900 4518900 0 38528 2014 14511 14908 60503 60503 VPSPPDEHQEAENAVSSGNR 20 0 1 Unmodified _VPSPPDEHQEAENAVSSGNR_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.6578 3 707.326156 2118.95664 NaN NaN NaN -0.10739 -7.5963E-05 NaN NaN NaN NaN 34.235 0.32904 34.235 34.031 34.36 0 0 0 0 3.2553E-11 1 17264 67.866 59.043 1 NaN NaN 0 6435500 6435500 0 38529 2014 14511 14908 60504 60504 VPSPPDEHQEAENAVSSGNR 20 0 1 Unmodified _VPSPPDEHQEAENAVSSGNR_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.6613 3 707.326156 2118.95664 72533.06 0.56465 0.00039939 0.40699 0.00028787 0.97164 0.00068727 707.326328507149 710.9967993213 41.38 1.0271 41.38 40.94 41.967 3.8147E-06 291 79 8 0 0 0 0.021846 1 19072 18.772 18.772 1 0.24383 0.20391 0 3826600 2586600 1240100 38530 2014 14511 14908 60505 60505 VPSPPDEHQEAENAVSSGNR 20 0 1 Unmodified _VPSPPDEHQEAENAVSSGNR_ 0 0 0 Q9BXS6;A8K4B4 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 707.3266 3 707.326156 2118.95664 72392.51 0.27498 0.0001945 0.86893 0.00061461 1.1439 0.00080911 707.66055712946 710.996520026185 41.671 0.66954 41.671 41.358 42.028 0 268 49 8 0 0 0 0.00056955 4 18779 34.148 31.425 1 0.46117 0.39158 0 3102800 2121700 981140 38531 2014 14511 14908 60506;60507;60508;60509 60506 VPSSLAYSLK 10 1 0 Unmodified _VPSSLAYSLK_ 0 0 0 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.803 2 532.802957 1063.59136 85119.29 0.28722 0.00015303 0.26527 0.00014133 0.55248 0.00029436 532.802935529237 536.810209697318 67.171 1.3514 67.171 66.407 67.759 0 487 107 7 0 0 0 0.00035253 3 38625 89.08 65.311 1 0.99575 1.0835 0 48511000 25377000 23134000 38532 2059 14512 14909 60510;60511;60512 60511 VPSSLAYSLK 10 1 0 Unmodified _VPSSLAYSLK_ 0 0 0 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.8103 2 532.802957 1063.59136 84683.84 0.32989 0.00017576 0.18843 0.00010039 0.51831 0.00027616 532.802918175085 536.810152453368 65.78 1.2446 65.78 65.251 66.496 0 524 104 6 0 0 0 0.0033968 3 39050 64.711 54.001 1 1.0173 1.1478 0 63552000 29896000 33656000 38533 2059 14512 14909 60513;60514;60515 60515 VPSSLAYSLK 10 1 0 Unmodified _VPSSLAYSLK_ 0 0 0 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 536.8103 2 532.802957 1063.59136 82652.75 0.3281 0.00017481 0.17745 9.4545E-05 0.50555 0.00026936 532.802923176764 536.810073255946 77.126 0.9425 77.126 76.682 77.625 0 364 63 8 0 0 0 0.055405 1 41132 35.541 26.327 1 2.0668 1.6971 0 37845000 12022000 25823000 38534 2059 14512 14909 60516 60516 VPSSLAYSLK 10 1 0 Unmodified _VPSSLAYSLK_ 0 0 0 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 536.8101 2 532.802957 1063.59136 83161.8 0.47398 0.00025254 0.025963 1.3833E-05 0.49994 0.00026637 532.802850094829 536.809988329813 77.398 1.2499 77.398 76.936 78.186 0 394 81 8 0 0 0 0.043038 1 40474 37.556 30.336 1 2.1253 1.7576 0 32635000 10712000 21924000 38535 2059 14512 14909 60517 60517 VPSVPETELTDQAWLPAGVR 20 0 1 Unmodified _VPSVPETELTDQAWLPAGVR_ 0 0 0 Q9H6R4;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1088.5719 2 1083.06549 2164.11643 58762.07 0.40359 0.00043711 0.096415 0.00010442 0.50001 0.00054154 1083.56716195021 1088.57151906405 116.4 0.44869 116.4 116.18 116.62 0 200 30 9 0 0 0 4.9857E-24 2 74276 136.24 136.24 1 0.87474 0.91588 0 39098000 20531000 18567000 38536 2038 14513 14910 60518;60519 60519 VPSVPETELTDQAWLPAGVR 20 0 1 Unmodified _VPSVPETELTDQAWLPAGVR_ 0 0 0 Q9H6R4;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1088.5721 2 1083.06549 2164.11643 58442.82 0.43377 0.00046981 0.12247 0.00013265 0.55625 0.00060245 1083.56704303019 1088.57139824971 115.88 0.40077 115.88 115.72 116.13 0 210 26 10 0 0 0 1.6051E-23 2 75660 132.47 132.47 1 0.93178 1.0728 0 53908000 29086000 24822000 38537 2038 14513 14910 60520;60521 60521 VPSVPETELTDQAWLPAGVR 20 0 1 Unmodified _VPSVPETELTDQAWLPAGVR_ 0 0 0 Q9H6R4;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1088.5717 2 1083.06549 2164.11643 57901.91 0.52021 0.00056342 -0.27698 -0.00029999 0.24323 0.00026344 1083.0654898185 1088.57068546334 128.12 0.51538 128.12 127.83 128.35 0 138 20 11 0 0 0 5.5475E-06 2 77212 55.899 55.899 1 1.4592 1.2422 0 35487000 13969000 21518000 38538 2038 14513 14910 60522;60523 60522 VPSVPETELTDQAWLPAGVR 20 0 1 Unmodified _VPSVPETELTDQAWLPAGVR_ 0 0 0 Q9H6R4;A0A0A0MRW6 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1083.567 2 1083.06549 2164.11643 58010.89 0.26604 0.00028814 0.15215 0.00016479 0.41819 0.00045292 1083.56713275661 1088.57107805361 127.97 0.47296 127.97 127.71 128.18 7.6294E-06 144 19 10 0 0 0 1.1369E-09 2 76246 98.592 98.592 1 1.3541 1.1813 0 47370000 21397000 25973000 38539 2038 14513 14910 60524;60525 60525 VPSVSSSALVSSLHLLK 17 1 0 Unmodified _VPSVSSSALVSSLHLLK_ 0 0 0 Q9Y678 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.3376 3 575.336605 1722.98799 80178.33 0.96741 0.00055658 -0.096336 -5.5425E-05 0.87107 0.00050116 575.336569150524 578.007826810889 110.31 0.49885 110.31 110.09 110.58 -7.6294E-06 160 35 6 0 0 0 0.0031101 2 69257 31.7 31.7 1 2.086 2.251 0 37246000 12847000 24399000 38540 2151 14514 14911 60526;60527 60527 VPSVSSSALVSSLHLLK 17 1 0 Unmodified _VPSVSSSALVSSLHLLK_ 0 0 0 Q9Y678 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 578.0089 3 575.336605 1722.98799 80704.18 0.6421 0.00036942 -0.10779 -6.2018E-05 0.5343 0.0003074 575.336404746337 578.007874795488 109.58 0.4758 109.58 109.3 109.78 7.6294E-06 151 31 7 0 0 0 0.017662 1 70218 21.773 21.773 1 1.9119 1.9789 0 18631000 7266500 11365000 38541 2151 14514 14911 60528 60528 VPTANVSVVDLTCR 14 0 1 Unmodified _VPTANVSVVDLTCR_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;Q5ZEY3 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.9012 2 765.900865 1529.78718 69028.3 0.66134 0.00050652 -0.28845 -0.00022093 0.37289 0.00028559 765.900992029709 770.905057150565 87.865 0.92652 87.865 87.387 88.313 0 426 83 7 0 0 0 1.6901E-14 1 52854 132.5 121.4 1 2.6735 3.0936 0 164660000 43488000 121170000 38542 1442 14515 14912 60529 60529 VPTANVSVVDLTCR 14 0 1 Unmodified _VPTANVSVVDLTCR_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;Q5ZEY3 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 770.9058 2 765.900865 1529.78718 69220.43 0.47334 0.00036253 -0.086987 -6.6624E-05 0.38635 0.00029591 765.900975901098 770.905129470006 87.139 0.88554 87.139 86.634 87.52 0 393 74 8 0 0 0 7.1561E-47 2 53676 184.65 175.31 1 2.448 2.7954 0 148100000 42039000 106060000 38543 1442 14515 14912 60530;60531 60531 VPTANVSVVDLTCR 14 0 1 Unmodified _VPTANVSVVDLTCR_ 0 0 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;A4UCT1;Q5ZEY3 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 765.9009 2 765.900865 1529.78718 68418.17 0.44067 0.00033751 -0.11494 -8.8035E-05 0.32573 0.00024948 765.900989575609 770.905130089964 100.76 0.72736 100.76 100.38 101.11 7.6294E-06 308 51 9 0 0 0 0.00016807 2 56898 73.881 58.342 1 1.7516 1.4761 0 28287000 10066000 18221000 38544 1442 14515 14912 60532;60533 60532 VPTEPPATSVAAR 13 0 1 Unmodified _VPTEPPATSVAAR_ 0 0 0 Q92610 Q92610 Q92610 ZNF592 Zinc finger protein 592 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3558 2 648.351334 1294.68811 79066.65 0.73709 0.00047789 -0.28261 -0.00018323 0.45448 0.00029466 648.351150367492 653.355095641618 42.068 0.55171 42.068 41.885 42.437 -3.8147E-06 113 49 4 0 0 0 0.0090055 1 22630 43.297 33.609 1 0.72504 0.71142 0 13835000 8247400 5587200 38545 1948 14516 14913 60534 60534 VPTLAVPAISLPDDVR 16 0 1 Unmodified _VPTLAVPAISLPDDVR_ 0 0 0 A0A024R7E3;P26358;K7EJL0;K7EMU8;K7EIZ6 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.9302 2 831.974887 1661.93522 69271.97 0.95136 0.00079151 -0.83269 -0.00069278 0.11867 9.8728E-05 831.973954383165 836.978598089919 120.63 0.38739 120.63 120.43 120.82 7.6294E-06 154 28 7 0 0 0 0.035407 1 77853 36.847 27.658 1 0.37919 0.38024 0 16176000 11814000 4362100 38546 222 14517 14914 60535 60535 VPTLAVPAISLPDDVR 16 0 1 Unmodified _VPTLAVPAISLPDDVR_ 0 0 0 A0A024R7E3;P26358;K7EJL0;K7EMU8;K7EIZ6 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.4765 2 831.974887 1661.93522 68813.92 1.1736 0.00097639 -0.72319 -0.00060168 0.45039 0.00037471 832.475494684627 836.978607247985 120.17 0.36443 120.17 119.99 120.35 -7.6294E-06 146 26 7 0 0 0 0.0015438 1 79394 62.338 48.904 1 0.33786 0.33835 0 18776000 14534000 4241800 38547 222 14517 14914 60536 60536 VPTLAVPAISLPDDVRR 17 0 2 Unmodified _VPTLAVPAISLPDDVRR_ 0 0 1 A0A024R7E3;P26358;K7EJL0;K7EMU8;K7EIZ6 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 607.0197 3 607.019387 1818.03633 NaN NaN NaN 0.0004619 2.8038E-07 NaN NaN NaN NaN 110.02 0.39012 110.02 109.79 110.18 0 0 0 0 0.038337 1 68963 25.198 20.717 1 NaN NaN 0 12988000 12988000 0 38548 222 14518 14915 60537 60537 VPTLAVPAISLPDDVRR 17 0 2 Unmodified _VPTLAVPAISLPDDVRR_ 0 0 1 A0A024R7E3;P26358;K7EJL0;K7EMU8;K7EIZ6 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.6918 3 607.019387 1818.03633 77735.98 0.55485 0.00033681 0.32577 0.00019775 0.88062 0.00053455 607.353583461781 613.691765413829 120.79 0.41382 120.79 120.55 120.96 -7.6294E-06 91 19 7 0 0 0 0.00035622 2 71808 40.962 40.962 1 0.8794 0.75155 0 6368900 3357900 3011000 38549 222 14518 14915 60538;60539 60539 VPTLAVPAISLPDDVRR 17 0 2 Unmodified _VPTLAVPAISLPDDVRR_ 0 0 1 A0A024R7E3;P26358;K7EJL0;K7EMU8;K7EIZ6 A0A024R7E3 A0A024R7E3 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 613.6926 3 607.019387 1818.03633 78182.73 0.71992 0.00043701 0.071398 4.334E-05 0.79132 0.00048035 607.353404317648 613.691760401752 120.54 0.47382 120.54 120.3 120.78 7.6294E-06 119 26 7 0 0 0 0.017355 2 70684 20.939 20.939 1 0.87398 0.79717 0 8018300 4236600 3781700 38550 222 14518 14915 60540;60541 60541 VPTPIQR 7 0 1 Unmodified _VPTPIQR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.7449 2 405.745245 809.475937 94185.43 0.021246 8.6206E-06 0.20921 8.4885E-05 0.23045 9.3505E-05 405.745222033298 410.749297041915 28.998 0.29127 28.998 28.85 29.141 1.9073E-06 69 14 7 0 0 0 0.016076 1 13863 98.415 61.44 1 0.97852 1.1294 0 156160000 79764000 76399000 38551 1933 14519 14916 60542 60542 VPTPIQR 7 0 1 Unmodified _VPTPIQR_ 0 0 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 405.7455 2 405.745245 809.475937 94879.27 -0.018483 -7.4995E-06 0.58994 0.00023937 0.57146 0.00023187 405.745404377493 410.749397239777 28.219 0.31958 28.219 28.025 28.345 -1.9073E-06 51 14 6 0 0 0 0.010959 1 13453 109.7 54.917 1 1.1127 1.2685 0 99903000 45120000 54783000 38552 1933 14519 14916 60543 60543 VPVDEFDGK 9 1 0 Unmodified _VPVDEFDGK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.2559 2 503.248015 1004.48148 86911.63 0.50608 0.00025468 0.10826 5.4483E-05 0.61434 0.00030917 503.248007543828 507.254999056137 42.803 0.58841 42.803 42.648 43.237 0 201 46 6 0 0 0 0.0054512 3 22827 66.692 66.692 1 1.0726 1.0579 0 24864000 11567000 13296000 38553 452 14520 14917 60544;60545;60546 60545 VPVDEFDGK 9 1 0 Unmodified _VPVDEFDGK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.2549 2 503.248015 1004.48148 84522.48 0.42504 0.0002139 -0.19429 -9.7777E-05 0.23075 0.00011612 503.247924701111 507.254911468464 42.271 0.73888 42.271 41.944 42.682 0 218 64 5 0 0 0 0.012314 2 22741 57.59 53.453 1 1.1747 1.2601 0 37272000 19735000 17537000 38554 452 14520 14917 60547;60548 60548 VPVDEFDGK 9 1 0 Unmodified _VPVDEFDGK_ 0 0 0 F1T0B3;A0A087X2G1;A3RJH1;Q92499 F1T0B3 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 503.2481 2 503.248015 1004.48148 84984.26 0.01301 6.5474E-06 -0.18302 -9.2106E-05 -0.17001 -8.5558E-05 503.247962499896 507.255248314322 49.743 0.69073 49.743 49.343 50.034 0 218 53 5 0 0 0 0.050765 1 23778 37.727 33.59 1 1.8494 1.4992 0 2770300 836870 1933400 38555 452 14520 14917 60549 60549 VPVDVAYQR 9 0 1 Unmodified _VPVDVAYQR_ 0 0 0 A0A075B730;A0A087X1U6;Q15149;D3DWL0 A0A075B730;Q15149 Q15149 EPPK1;PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.7894 2 523.785099 1045.55564 84628.3 0.53832 0.00028196 0.16707 8.7508E-05 0.70539 0.00036947 523.784989605207 528.789336579019 44.818 0.85025 44.818 44.569 45.419 -3.8147E-06 298 76 6 0 0 0 0.0031664 3 24050 72.485 53.702 1 1.7442 1.8996 0 51168000 20697000 30471000 38556 1754;397 14521 14918 60550;60551;60552 60551 VPVDVAYQR 9 0 1 Unmodified _VPVDVAYQR_ 0 0 0 A0A075B730;A0A087X1U6;Q15149;D3DWL0 A0A075B730;Q15149 Q15149 EPPK1;PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.7853 2 523.785099 1045.55564 84922.15 0.79747 0.0004177 0.18261 9.5648E-05 0.98008 0.00051335 523.785132437456 528.789284849411 43.99 0.83465 43.99 43.659 44.494 0 277 72 6 0 0 0 2.4164E-05 2 23949 114.65 88.047 1 1.6975 1.972 0 63580000 23971000 39609000 38557 1754;397 14521 14918 60553;60554 60554 VPVDVAYQR 9 0 1 Unmodified _VPVDVAYQR_ 0 0 0 A0A075B730;A0A087X1U6;Q15149;D3DWL0 A0A075B730;Q15149 Q15149 EPPK1;PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.7896 2 523.785099 1045.55564 84868.23 0.011552 6.0506E-06 0.35316 0.00018498 0.36471 0.00019103 523.785128189605 528.789307710287 51.646 0.52705 51.646 51.429 51.956 0 154 42 7 0 0 0 0.021548 2 25431 49.418 32.032 1 2.332 2.0052 0 6752900 1884500 4868400 38558 1754;397 14521 14918 60555;60556 60555 VPVDVAYQR 9 0 1 Unmodified _VPVDVAYQR_ 0 0 0 A0A075B730;A0A087X1U6;Q15149;D3DWL0 A0A075B730;Q15149 Q15149 EPPK1;PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 528.7889 2 523.785099 1045.55564 83931.71 0.16186 8.4779E-05 0.45838 0.0002401 0.62024 0.00032487 523.785103086336 528.789271062298 52.09 0.51354 52.09 51.832 52.346 0 146 38 8 0 0 0 0.0074668 2 25065 61.962 44.577 1 2.4778 2.063 0 6234800 1687400 4547400 38559 1754;397 14521 14918 60557;60558 60557 VPVDVAYR 8 0 1 Unmodified _VPVDVAYR_ 0 0 0 A0A075B730;A0A087X1U6;P58107;Q15149;D3DWL0 A0A075B730;P58107;Q15149 Q15149 EPPK1;PLEC;PLEC1 Epiplakin;Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.7603 2 459.75581 917.497067 88798.45 0.053626 2.4655E-05 -0.60292 -0.0002772 -0.5493 -0.00025254 459.75542370183 464.759671349122 47.06 0.71215 47.06 46.817 47.53 -3.8147E-06 340 65 7 0 0 0 0.0092533 1 25386 75.109 36.291 1 2.2231 2.6288 0 272170000 86754000 185420000 38560 1754;397;1622 14522 14919 60559 60559 VPVDVAYR 8 0 1 Unmodified _VPVDVAYR_ 0 0 0 A0A075B730;A0A087X1U6;P58107;Q15149;D3DWL0 A0A075B730;P58107;Q15149 Q15149 EPPK1;PLEC;PLEC1 Epiplakin;Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 464.7599 2 459.75581 917.497067 87282.94 0.030136 1.3855E-05 -0.66396 -0.00030526 -0.63383 -0.00029141 459.755086878359 464.759740934092 45.973 0.55514 45.973 45.814 46.369 0 248 44 8 0 0 0 0.0092293 1 25239 75.213 32.147 1 2.1671 2.5141 0 322880000 95401000 227480000 38561 1754;397;1622 14522 14919 60560 60560 VPVGDQPPDIEYQIK 15 1 0 Unmodified _VPVGDQPPDIEYQIK_ 0 0 0 Q59G96;P50570 Q59G96 Q59G96 DNM2 Dynamin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 853.4474 2 849.440877 1696.8672 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.357 1 84.357 83.857 84.857 0 0 0 0 0.0013924 1 50557 57.164 23.289 1 38562 1591 14523 14920 60561 60561 VPVGDQPPDIEYQIK 15 1 0 Unmodified _VPVGDQPPDIEYQIK_ 0 0 0 Q59G96;P50570 Q59G96 Q59G96 DNM2 Dynamin-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 853.4501 2 849.440877 1696.8672 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.547 1 83.547 83.047 84.047 0 0 0 0 0.0052459 1 51220 53.034 28.652 1 38563 1591 14523 14920 60562 60562 VPVHDVTDASK 11 1 0 Unmodified _VPVHDVTDASK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.8714 3 389.87166 1166.59315 97474.93 -0.16357 -6.377E-05 -1.8997 -0.00074065 -2.0633 -0.00080442 389.871777532733 392.543079601648 20.271 0.81385 20.271 19.977 20.791 0 101 27 7 0 0 0 0.0030911 2 6591 49.081 40.671 1 1.1649 1.2586 0 21908000 9989700 11918000 38564 1504 14524 14921 60563;60564 60564 VPVLDEGLTSVETYTPAIR 19 0 1 Unmodified _VPVLDEGLTSVETYTPAIR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1031.0493 2 1030.54914 2059.08374 NaN NaN NaN -0.51754 -0.00053335 NaN NaN NaN NaN 117.71 0.63575 117.71 117.47 118.1 0 0 0 0 3.8668E-17 1 75286 106.32 77.42 1 NaN NaN 0 13207000 13207000 0 38565 1945 14525 14922 60565 60565 VPVLDEGLTSVETYTPAIR 19 0 1 Unmodified _VPVLDEGLTSVETYTPAIR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1031.0504 2 1030.54914 2059.08374 NaN NaN NaN -0.87693 -0.00090372 NaN NaN NaN NaN 117.31 0.59627 117.31 117.02 117.61 0 0 0 0 2.2607E-23 1 76792 119.69 106.92 1 NaN NaN 0 16311000 16311000 0 38566 1945 14525 14922 60566 60566 VPVLDEGLTSVETYTPAIR 19 0 1 Unmodified _VPVLDEGLTSVETYTPAIR_ 0 0 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1035.5551 2 1030.54914 2059.08374 NaN NaN NaN 0.36247 0.00037354 NaN NaN NaN NaN 129.59 0.66547 129.59 129.38 130.05 0 0 0 0 1.5453E-13 1 77430 103.83 89.87 1 NaN NaN 0 17563000 0 17563000 38567 1945 14525 14922 60567 60567 VPVLQLDSGNYLFSTSAICR 20 0 1 Unmodified _VPVLQLDSGNYLFSTSAICR_ 0 0 0 A8K492;P56192;A0A024RBA2;F5H2V6;F8VS26;F8W0M7;F8W0S4;F8VZZ9 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1126.0754 2 1120.57263 2239.1307 NaN NaN NaN -0.78338 -0.00087784 NaN NaN NaN NaN 122.1 0.36983 122.1 121.95 122.32 0 0 0 0 0.00062509 1 80977 50.562 45.484 1 NaN NaN 0 3489400 0 3489400 38568 732 14526 14923 60568 60568 VPVLQLDSGNYLFSTSAICR 20 0 1 Unmodified _VPVLQLDSGNYLFSTSAICR_ 0 0 0 A8K492;P56192;A0A024RBA2;F5H2V6;F8VS26;F8W0M7;F8W0S4;F8VZZ9 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1125.5774 2 1120.57263 2239.1307 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.22 1 122.22 121.72 122.72 7.6294E-06 0 0 0 0.0094366 1 81045 43.761 36.151 1 38569 732 14526 14923 60569 60569 VPVSVNLLSK 10 1 0 Unmodified _VPVSVNLLSK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.3336 2 528.326599 1054.63865 83900.13 0.34139 0.00018036 0.12955 6.8442E-05 0.47093 0.00024881 528.326627590705 532.333728638997 83.271 0.69731 83.271 83.043 83.741 0 325 59 8 0 0 0 1.7051E-06 2 49805 111.46 90.935 1 0.66013 0.76689 0 249220000 148490000 100730000 38570 1415 14527 14924 60570;60571 60571 VPVSVNLLSK 10 1 0 Unmodified _VPVSVNLLSK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.3331 2 528.326599 1054.63865 83960.95 0.28966 0.00015304 0.17654 9.3271E-05 0.4662 0.00024631 528.326644796714 532.333699473892 82.278 0.64555 82.278 82.012 82.658 0 342 56 9 0 0 0 0.00022929 2 50275 93.111 74.335 1 0.64476 0.75067 0 244290000 150750000 93540000 38571 1415 14527 14924 60572;60573 60573 VPVSVNLLSK 10 1 0 Unmodified _VPVSVNLLSK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.3343 2 528.326599 1054.63865 83206.57 0.52094 0.00027523 0.24806 0.00013105 0.769 0.00040628 528.326679920058 532.333742529483 95.215 1.0818 95.215 94.943 96.025 0 378 75 8 0 0 0 0.0032991 2 53210 65.157 56.199 1 0.70855 0.58271 0 39189000 22171000 17018000 38572 1415 14527 14924 60574;60575 60574 VPVSVNLLSK 10 1 0 Unmodified _VPVSVNLLSK_ 0 0 0 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3C4 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.3344 2 528.326599 1054.63865 83088.89 0.38686 0.00020439 0.3645 0.00019258 0.75136 0.00039696 528.326714968317 532.333782022894 95.061 1.1007 95.061 94.718 95.819 0 348 74 8 0 0 0 0.0091807 2 52320 55.064 45.85 1 0.72809 0.59898 0 28216000 16057000 12159000 38573 1415 14527 14924 60576;60577 60577 VPWFDQQNGR 10 0 1 Unmodified _VPWFDQQNGR_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.8031 2 623.801811 1245.58907 NaN NaN NaN 0.78716 0.00049103 NaN NaN NaN NaN 66.738 0.47612 66.738 66.505 66.981 0 0 0 0 0.00516 1 38459 69.825 43.441 1 NaN NaN 0 7284800 7284800 0 38574 1946 14528 14925 60578 60578 VPWFDQQNGR 10 0 1 Unmodified _VPWFDQQNGR_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.3035 2 623.801811 1245.58907 NaN NaN NaN 1.0217 0.00063735 NaN NaN NaN NaN 65.549 0.47469 65.549 65.264 65.738 0 0 0 0 0.0008169 2 38592 89.355 62.971 1 NaN NaN 0 10962000 10962000 0 38575 1946 14528 14925 60579;60580 60580 VPYFNAPVYLENK 13 1 0 Unmodified _VPYFNAPVYLENK_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.9059 2 777.403566 1552.79258 69547.42 0.71275 0.00055409 -0.3588 -0.00027893 0.35395 0.00027516 777.403521439637 781.410033776735 102.38 0.95161 102.38 101.96 102.91 -7.6294E-06 479 79 8 0 0 0 0.00013091 2 62844 107.11 99.468 1 0.7932 0.89586 0 81412000 48055000 33357000 38576 387 14529 14926 60581;60582 60581 VPYFNAPVYLENK 13 1 0 Unmodified _VPYFNAPVYLENK_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 777.4044 2 777.403566 1552.79258 69674.75 0.57322 0.00044562 -0.2766 -0.00021503 0.29662 0.00023059 777.403587504108 781.410057601472 101.71 1.0416 101.71 101.28 102.32 0 463 81 8 0 0 0 4.492E-06 3 63822 116.74 107.03 1 0.80902 0.9058 0 82888000 44983000 37905000 38577 387 14529 14926 60583;60584;60585 60584 VPYFNAPVYLENK 13 1 0 Unmodified _VPYFNAPVYLENK_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.4053 2 777.403566 1552.79258 69142.48 1.0788 0.00083866 -0.11108 -8.6357E-05 0.96772 0.00075231 777.403438615285 781.410350894927 114.39 0.68097 114.39 114.05 114.73 0 178 29 9 0 0 0 1.1931E-23 2 66863 156.58 156.58 1 0.53959 0.43852 0 28671000 18824000 9846900 38578 387 14529 14926 60586;60587 60587 VPYFNAPVYLENK 13 1 0 Unmodified _VPYFNAPVYLENK_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 777.4039 2 777.403566 1552.79258 69425.2 0.76885 0.00059771 0.01491 1.1591E-05 0.78376 0.0006093 777.403456681676 781.410402606673 114.27 0.77647 114.27 113.85 114.62 -7.6294E-06 182 29 9 0 0 0 0.00011999 2 65854 76.927 72.531 1 0.55169 0.45138 0 26739000 17860000 8879100 38579 387 14529 14926 60588;60589 60589 VQADVPPEILNNVGALHFR 19 0 1 Unmodified _VQADVPPEILNNVGALHFR_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.3803 3 697.044484 2088.11162 72604.95 0.91582 0.00063836 -0.1275 -8.8875E-05 0.78831 0.00054949 697.378369255317 700.714859351371 112.18 0.64194 112.18 111.89 112.53 0 309 44 9 0 0 0 1.0282E-05 2 70577 54.355 54.355 1 1.5614 1.6237 0 38080000 14458000 23622000 38580 765 14530 14927 60590;60591 60590 VQADVPPEILNNVGALHFR 19 0 1 Unmodified _VQADVPPEILNNVGALHFR_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.382 3 697.044484 2088.11162 72733.52 0.92121 0.00064213 -0.18271 -0.00012736 0.7385 0.00051477 697.378562456376 700.714818603155 111.53 0.60835 111.53 111.26 111.87 -7.6294E-06 252 40 9 0 0 0 1.3561E-08 2 71844 91.401 91.401 1 1.5924 1.7501 0 40627000 17653000 22974000 38581 765 14530 14927 60592;60593 60592 VQADVPPEILNNVGALHFR 19 0 1 Unmodified _VQADVPPEILNNVGALHFR_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 700.3814 3 697.044484 2088.11162 73181.89 0.81775 0.00057001 -0.40575 -0.00028283 0.412 0.00028718 697.378659717389 700.714848001407 123.06 0.59052 123.06 122.79 123.38 0 173 27 9 0 0 0 0.00066784 2 73386 35.176 35.176 1 1.7278 1.4169 0 12472000 4313900 8157700 38582 765 14530 14927 60594;60595 60594 VQADVPPEILNNVGALHFR 19 0 1 Unmodified _VQADVPPEILNNVGALHFR_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 700.7152 3 697.044484 2088.11162 72694.34 0.84427 0.00058849 -0.41675 -0.0002905 0.42752 0.000298 697.378852283077 700.714866331424 122.92 0.62332 122.92 122.63 123.26 7.6294E-06 171 30 8 0 0 0 1.0601E-05 2 72354 53.779 53.779 1 1.7734 1.4311 0 10931000 3757300 7173400 38583 765 14530 14927 60596;60597 60596 VQAGAYPTEK 10 1 0 Unmodified _VQAGAYPTEK_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.282 2 532.274564 1062.53457 81465.61 0.58886 0.00031344 -0.56123 -0.00029873 0.02763 1.4707E-05 532.274350258025 536.281078413048 22.711 0.47069 22.711 22.543 23.014 0 122 27 6 0 0 0 0.00022929 2 8689 93.111 60.27 1 0.81205 0.8745 0 33534000 18855000 14679000 38584 1927 14531 14928 60598;60599 60599 VQAGAYPTEK 10 1 0 Unmodified _VQAGAYPTEK_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.2803 2 532.274564 1062.53457 NaN NaN NaN -0.19865 -0.00010574 NaN NaN NaN NaN 22.497 0.30312 22.497 22.346 22.649 0 0 0 0 0.0064869 1 8479 66.962 34.121 1 NaN NaN 0 12582000 0 12582000 38585 1927 14531 14928 60600 60600 VQAGAYPTEK 10 1 0 Unmodified _VQAGAYPTEK_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.2759 2 532.274564 1062.53457 80808.52 0.37946 0.00020198 -0.36752 -0.00019562 0.011934 6.3523E-06 532.275286578749 536.281695399263 25.11 1.5844 25.11 24.153 25.737 0 183 79 6 0 0 0 0.0099144 3 9045 54.066 23.033 1 0.97632 0.77321 0 10390000 5095400 5294800 38586 1927 14531 14928 60601;60602;60603 60602 VQAGAYPTEK 10 1 0 Unmodified _VQAGAYPTEK_ 0 0 0 Q8NEJ9;H0YJ17;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.2746 2 532.274564 1062.53457 83443.47 0.49485 0.00026339 -0.76421 -0.00040677 -0.26936 -0.00014337 532.274482686441 536.281825312404 25.111 0.90141 25.111 24.843 25.744 -1.9073E-06 104 44 5 0 0 0 0.04172 2 8528 38.086 14.127 1 0.90817 0.71247 0 3316700 1767800 1548900 38587 1927 14531 14928 60604;60605 60604 VQAGDVITIDK 11 1 0 Unmodified _VQAGDVITIDK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.8218 2 579.821878 1157.6292 80402.63 0.45498 0.00026381 0.17573 0.00010189 0.63071 0.0003657 579.821963553453 583.829050797145 63.215 0.94796 63.215 62.709 63.656 0 446 91 6 0 0 0 0.00015638 2 36350 94.692 48.302 1 0.85684 0.96177 0 67506000 41268000 26238000 38588 2120 14532 14929 60606;60607 60607 VQAGDVITIDK 11 1 0 Unmodified _VQAGDVITIDK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.822 2 579.821878 1157.6292 79903.9 0.56131 0.00032546 -0.023512 -1.3633E-05 0.5378 0.00031183 579.821828760076 583.828853106528 62.006 1.1104 62.006 61.574 62.684 0 458 103 7 0 0 0 2.4004E-08 2 36397 121.6 68.688 1 0.84256 0.9441 0 80738000 41928000 38810000 38589 2120 14532 14929 60608;60609 60609 VQAGDVITIDK 11 1 0 Unmodified _VQAGDVITIDK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.8224 2 579.821878 1157.6292 79733.57 0.4675 0.00027107 0.3921 0.00022735 0.8596 0.00049842 579.822049973474 583.829203799472 72.627 0.91849 72.627 72.296 73.215 0 315 65 8 0 0 0 4.3775E-05 3 38329 99.568 58.539 1 1.207 0.93504 0 13293000 5628600 7664600 38590 2120 14532 14929 60610;60611;60612 60611 VQAGDVITIDK 11 1 0 Unmodified _VQAGDVITIDK_ 0 0 0 Q9Y230;B3KNL2;M0R0Y3;B4DW30 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.822 2 579.821878 1157.6292 79682.55 0.36554 0.00021195 0.28813 0.00016706 0.65367 0.00037901 579.821889941136 583.829154486301 73.059 0.92572 73.059 72.782 73.708 0 317 66 7 0 0 0 0.0014091 2 37807 67.726 38.999 1 1.2636 1.0421 0 11006000 4906400 6099300 38591 2120 14532 14929 60613;60614 60614 VQALEEANNDLENK 14 1 0 Unmodified _VQALEEANNDLENK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.8865 2 793.886466 1585.75838 NaN NaN NaN 0.070375 5.5869E-05 NaN NaN NaN NaN 50.76 0.75164 50.76 50.604 51.356 0 0 0 0 1.4071E-42 1 28084 166.14 150.18 1 NaN NaN 0 565390000 565390000 0 + 38592 1165 14533 14930 60615 60615 VQALEEANNDLENK 14 1 0 Unmodified _VQALEEANNDLENK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.887 2 793.886466 1585.75838 NaN NaN NaN -0.66906 -0.00053116 NaN NaN NaN NaN 52.061 0.40249 52.061 51.97 52.373 0 0 0 0 0.011174 1 28895 51.286 38.33 1 NaN NaN 0 7878300 7878300 0 + 38593 1165 14533 14930 60616 60616 VQALEEANNDLENK 14 1 0 Unmodified _VQALEEANNDLENK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.887 2 793.886466 1585.75838 NaN NaN NaN -0.058527 -4.6464E-05 NaN NaN NaN NaN 49.503 1.3684 49.503 49.145 50.514 0 0 0 0 1.4071E-42 3 28188 166.14 145.36 1 NaN NaN 0 991630000 991630000 0 + 38594 1165 14533 14930 60617;60618;60619 60619 VQALEEANNDLENK 14 1 0 Unmodified _VQALEEANNDLENK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.8869 2 793.886466 1585.75838 NaN NaN NaN 0.049641 3.9409E-05 NaN NaN NaN NaN 50.937 0.1772 50.937 50.807 50.984 0 0 0 0 1.6849E-09 1 28821 106.67 80.55 1 NaN NaN 0 2366400 2366400 0 + 38595 1165 14533 14930 60620 60620 VQALEEANNDLENK 14 1 0 Unmodified _VQALEEANNDLENK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.8872 2 793.886466 1585.75838 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.744 1 51.744 51.244 52.244 0 0 0 0 2.033E-05 1 29384 94.767 70.916 1 + 38596 1165 14533 14930 60621 60621 VQALEEANNDLENK 14 1 0 Unmodified _VQALEEANNDLENK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.886 2 793.886466 1585.75838 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.671 1 53.671 53.171 54.171 0 0 0 0 0.021514 1 30673 44.299 29.098 1 + 38597 1165 14533 14930 60622 60622 VQALEEANNDLENK 14 1 0 Unmodified _VQALEEANNDLENK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 793.8869 2 793.886466 1585.75838 NaN NaN NaN -0.12212 -9.6947E-05 NaN NaN NaN NaN 58.86 2.3079 58.86 58.465 60.773 3.8147E-06 0 0 0 4.2743E-42 3 30255 160.67 140.91 1 NaN NaN 0 142350000 142350000 0 + 38598 1165 14533 14930 60623;60624;60625 60624 VQALEEANNDLENK 14 1 0 Unmodified _VQALEEANNDLENK_ 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 793.8862 2 793.886466 1585.75838 NaN NaN NaN -0.127 -0.00010082 NaN NaN NaN NaN 59.434 3.6543 59.434 58.882 62.536 3.8147E-06 0 0 0 5.8461E-42 4 29974 157.68 157.68 1 NaN NaN 0 100560000 100560000 0 + 38599 1165 14533 14930 60626;60627;60628;60629 60627 VQAQAEQGQQELK 13 1 0 Unmodified _VQAQAEQGQQELK_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.8795 2 728.873162 1455.73177 71933 0.63786 0.00046492 -0.048732 -3.552E-05 0.58912 0.0004294 728.873260676188 732.880257333133 22.201 0.29375 22.201 22.074 22.368 0 66 16 6 0 0 0 7.4146E-24 2 8309 159.09 159.09 1 0.74455 0.75859 0 13253000 7948500 5304300 38600 371 14534 14931 60630;60631 60631 VQAQAEQGQQELK 13 1 0 Unmodified _VQAQAEQGQQELK_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.8804 2 728.873162 1455.73177 72046.85 0.52162 0.00038019 0.12894 9.3983E-05 0.65056 0.00047417 728.872997181772 732.880458932603 22.096 0.32621 22.096 21.915 22.241 0 70 14 7 0 0 0 1.4677E-23 2 8180 155.06 155.06 1 0.82356 0.88563 0 21546000 12692000 8854300 38601 371 14534 14931 60632;60633 60633 VQAQAEQGQQELK 13 1 0 Unmodified _VQAQAEQGQQELK_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.3848 2 728.873162 1455.73177 71889.58 0.63618 0.00046369 3.0187 0.0022002 3.6549 0.0026639 728.873379492959 733.385340369657 24.734 0.45853 24.734 24.503 24.961 0 111 24 7 0 0 0 0.00079839 1 8837 60.434 49.91 1 1.4926 1.2575 0 2123800 492140 1631600 38602 371 14534 14931 60634 60634 VQAQAEQGQQELK 13 1 0 Unmodified _VQAQAEQGQQELK_ 0 0 0 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.8808 2 728.873162 1455.73177 70979.77 0.62211 0.00045344 0.33639 0.00024519 0.9585 0.00069863 728.873796420353 732.880014675579 24.907 0.28045 24.907 24.739 25.019 0 68 14 6 0 0 0 0.012258 2 8400 39.625 39.625 1 1.3911 1.2126 0 1330200 719860 610320 38603 371 14534 14931 60635;60636 60635 VQAQVIQETIVPK 13 1 0 Unmodified _VQAQVIQETIVPK_ 0 0 0 A0A024R1K8;Q15459;B4E091 A0A024R1K8 A0A024R1K8 SF3A1 Splicing factor 3A subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.9246 2 726.924666 1451.83478 72577.13 1.2515 0.00090973 -0.91997 -0.00066875 0.33151 0.00024098 726.924283910308 730.931189439179 80.847 0.42909 80.847 80.623 81.052 0 112 36 6 0 0 0 0.00021073 1 48136 69.979 69.979 1 1.6814 1.723 0 13050000 5789700 7260000 38604 79 14535 14932 60637 60637 VQAQVIQETIVPK 13 1 0 Unmodified _VQAQVIQETIVPK_ 0 0 0 A0A024R1K8;Q15459;B4E091 A0A024R1K8 A0A024R1K8 SF3A1 Splicing factor 3A subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.9317 2 726.924666 1451.83478 NaN NaN NaN -0.42077 -0.00030587 NaN NaN NaN NaN 79.792 0.33528 79.792 79.629 79.964 0 0 0 0 0.00019263 1 48548 89.548 69.219 1 NaN NaN 0 10966000 0 10966000 38605 79 14535 14932 60638 60638 VQAVVAVAR 9 0 1 Unmodified _VQAVVAVAR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 461.7885 2 456.784902 911.55525 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.339 1 41.339 40.839 41.839 0 0 0 0 0.041095 1 21775 49.442 25.673 1 38606 415 14536 14933 60639 60639 VQAVVAVAR 9 0 1 Unmodified _VQAVVAVAR_ 0 0 0 D6W5C0;B2ZZ89;A0A087WUZ3;Q01082;K9MS24;F8W6C1 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.7899 2 456.784902 911.55525 90967.36 0.21962 0.00010032 -0.39001 -0.00017815 -0.17039 -7.783E-05 456.784665700556 461.788793244341 40.234 0.41693 40.234 40.067 40.484 0 125 35 6 0 0 0 0.0006569 1 21409 96.19 39.921 1 1.3441 1.5565 0 67145000 30923000 36222000 38607 415 14536 14933 60640 60640 VQAYEEPSVASSPNGK 16 1 0 Unmodified _VQAYEEPSVASSPNGK_ 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.9045 2 831.902116 1661.78968 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.537 1 41.537 41.037 42.037 0 0 0 0 0.010367 1 21909 45.257 36.253 1 38608 1965 14537 14934 60641 60641 VQDDEVGDGTTSVTVLAAELLR 22 0 1 Unmodified _VQDDEVGDGTTSVTVLAAELLR_ 0 0 0 F8VQ14;F5GWF6;V9HW96;P78371 F8VQ14 F8VQ14 CCT2;HEL-S-100n T-complex protein 1 subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1145.0842 2 1144.58444 2287.15433 56469.05 -0.42495 -0.00048639 0.237 0.00027126 -0.18795 -0.00021513 1145.08456775951 1150.09071120478 133.37 0.31158 133.37 133.19 133.5 0 20 8 5 0 0 0 6.7716E-05 1 87355 38.511 38.511 1 2.978 3.0714 0 19911000 3557300 16354000 38609 1255 14538 14935 60642 60642 VQDGLSDIAEK 11 1 0 Unmodified _VQDGLSDIAEK_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.8077 2 587.801143 1173.58773 NaN NaN NaN -0.075534 -4.4399E-05 NaN NaN NaN NaN 47.799 0.32166 47.799 47.683 48.005 0 0 0 0 0.00085142 1 26655 87.568 52.123 1 NaN NaN 0 21084000 0 21084000 38610 672 14539 14936 60643 60643 VQDGLSDIAEK 11 1 0 Unmodified _VQDGLSDIAEK_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.8014 2 587.801143 1173.58773 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.833 1 47.833 47.333 48.333 0 0 0 0 3.7889E-09 1 26668 117.02 58.041 1 38611 672 14539 14936 60644 60644 VQDGLSDIAEK 11 1 0 Unmodified _VQDGLSDIAEK_ 0 0 0 A4LAA3;P46100;A0A096LNW1;A0A096LNL9;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 591.8084 2 587.801143 1173.58773 NaN NaN NaN -0.78495 -0.00046139 NaN NaN NaN NaN 56.922 0.48093 56.922 56.748 57.229 0 0 0 0 0.0092589 1 28129 60.064 42.833 1 NaN NaN 0 2027600 0 2027600 38612 672 14539 14936 60645 60645 VQDLFCSVGLNVNNPHFLIMQGR 23 0 1 Oxidation (M) _VQDLFCSVGLNVNNPHFLIM(ox)QGR_ VQDLFCSVGLNVNNPHFLIM(1)QGR VQDLFCSVGLNVNNPHFLIM(89.03)QGR 0 1 0 A0A024R158;O95347;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 895.783 3 892.112463 2673.31556 63893.39 0.59745 0.00053299 -0.40955 -0.00036537 0.1879 0.00016763 892.446896915559 895.782818160918 115.44 0.52217 115.44 115.21 115.73 0 239 33 10 0 0 0 2.1645E-12 1 73502 89.028 89.028 1 1.3102 1.372 0 39122000 16101000 23021000 38613 69 14540 14937 60646 60646 45 VQDLFCSVGLNVNNPHFLIMQGR 23 0 1 Oxidation (M) _VQDLFCSVGLNVNNPHFLIM(ox)QGR_ VQDLFCSVGLNVNNPHFLIM(1)QGR VQDLFCSVGLNVNNPHFLIM(117.38)QGR 0 1 0 A0A024R158;O95347;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 895.7838 3 892.112463 2673.31556 64761.39 0.75975 0.00067779 -0.26405 -0.00023557 0.4957 0.00044222 892.446247868839 895.782894876107 114.83 0.44984 114.83 114.64 115.09 0 187 28 10 0 0 0 4.3047E-23 2 74813 117.38 117.38 1 1.2193 1.3979 0 51524000 21006000 30518000 38614 69 14540 14937 60647;60648 60647 45 VQDLFCSVGLNVNNPHFLIMQGR 23 0 1 Oxidation (M) _VQDLFCSVGLNVNNPHFLIM(ox)QGR_ VQDLFCSVGLNVNNPHFLIM(1)QGR VQDLFCSVGLNVNNPHFLIM(73.41)QGR 0 1 0 A0A024R158;O95347;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 895.7845 3 892.112463 2673.31556 63349.39 0.64379 0.00057433 -0.049678 -4.4318E-05 0.59411 0.00053001 892.446515790809 895.783097623023 126.69 0.51675 126.69 126.45 126.96 0 139 19 11 0 0 0 1.3194E-09 1 76239 73.405 73.405 1 1.2327 1.0259 0 22009000 10305000 11704000 38615 69 14540 14937 60649 60649 45 VQDLFCSVGLNVNNPHFLIMQGR 23 0 1 Oxidation (M) _VQDLFCSVGLNVNNPHFLIM(ox)QGR_ VQDLFCSVGLNVNNPHFLIM(1)QGR VQDLFCSVGLNVNNPHFLIM(107.47)QGR 0 1 0 A0A024R158;O95347;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 892.4456 3 892.112463 2673.31556 63684.42 0.26769 0.00023881 -0.10624 -9.4777E-05 0.16146 0.00014404 892.446620387901 895.783259993027 126.58 0.44437 126.58 126.34 126.79 -7.6294E-06 136 17 11 0 0 0 3.9814E-17 2 75200 107.47 107.47 1 1.1716 1.022 0 27961000 13455000 14506000 38616 69 14540 14937 60650;60651 60651 45 VQDLFCSVGLNVNNPHFLIMQGR 23 0 1 Oxidation (M) _VQDLFCSVGLNVNNPHFLIM(ox)QGR_ VQDLFCSVGLNVNNPHFLIM(1)QGR VQDLFCSVGLNVNNPHFLIM(94.2)QGR 0 1 0 A0A024R158;O95347;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 895.7853 3 892.112463 2673.31556 NaN NaN NaN 0.017957 1.602E-05 NaN NaN NaN NaN 131.89 0.3674 131.89 131.75 132.12 0 0 0 0 1.2692E-18 1 79229 94.201 78.885 1 NaN NaN 0 9507000 0 9507000 38617 69 14540 14937 60652 60652 45 VQDLFCSVGLNVNNPHFLIMQGR 23 0 1 Unmodified _VQDLFCSVGLNVNNPHFLIMQGR_ 0 0 0 A0A024R158;O95347;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 890.4528 3 886.780825 2657.32065 63990.56 0.86091 0.00076344 -0.51057 -0.00045276 0.35034 0.00031067 887.114646174131 890.451300859207 132.2 0.48001 132.2 131.95 132.43 0 165 22 11 0 0 0 6.1389E-10 2 80291 80.303 80.303 1 2.0342 1.7347 0 36888000 12527000 24362000 38618 69 14540 14938 60653;60654 60653 VQDLFCSVGLNVNNPHFLIMQGR 23 0 1 Unmodified _VQDLFCSVGLNVNNPHFLIMQGR_ 0 0 0 A0A024R158;O95347;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 890.4521 3 886.780825 2657.32065 64619.66 0.72224 0.00064047 0.47406 0.00042038 1.1963 0.0010609 887.115682690954 890.452028261208 131.87 0.56125 131.87 131.6 132.16 0 164 23 12 0 0 0 7.4058E-60 2 79202 166.25 166.25 1 2.2157 1.9328 0 43886000 13087000 30799000 38619 69 14540 14938 60655;60656 60655 VQDQDLPNTPHSK 13 1 0 Unmodified _VQDQDLPNTPHSK_ 0 0 0 Q9HB00;Q08554 Q9HB00 Q9HB00 DSC1 Desmocollin-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.3676 2 739.865337 1477.71612 NaN NaN NaN -1.0277 -0.00076039 NaN NaN NaN NaN 22.08 0.22541 22.08 21.971 22.197 0 0 0 0 0.0068696 1 8197 54.776 38.885 1 NaN NaN 0 2749200 2749200 0 38620 1693 14541 14939 60657 60657 VQDQDLPNTPHSK 13 1 0 Unmodified _VQDQDLPNTPHSK_ 0 0 0 Q9HB00;Q08554 Q9HB00 Q9HB00 DSC1 Desmocollin-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.3676 2 739.865337 1477.71612 NaN NaN NaN -0.66961 -0.00049542 NaN NaN NaN NaN 21.888 0.2177 21.888 21.779 21.996 -1.9073E-06 0 0 0 0.02389 1 7947 45.915 30.025 1 NaN NaN 0 3986100 3986100 0 38621 1693 14541 14939 60658 60658 VQDTSNTGLGEDIIHQLSK 19 1 0 Unmodified _VQDTSNTGLGEDIIHQLSK_ 0 0 0 A8K330;Q8IWA0;Q05D27 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.3547 3 685.683281 2054.02801 73943.85 0.64183 0.00044009 0.31086 0.00021315 0.95268 0.00065324 685.683709407149 688.68897844134 94.917 0.81758 94.917 94.557 95.374 0 468 62 10 0 0 0 3.9628E-14 2 57541 99.409 95.969 1 1.0736 1.2351 0 206300000 104910000 101390000 38622 716 14542 14940 60659;60660 60659 VQDTSNTGLGEDIIHQLSK 19 1 0 Unmodified _VQDTSNTGLGEDIIHQLSK_ 0 0 0 A8K330;Q8IWA0;Q05D27 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 688.689 3 685.683281 2054.02801 73011.89 0.75602 0.00051839 0.066765 4.5779E-05 0.82279 0.00056417 686.017704117863 688.3547315612 94.002 1.0329 94.002 93.655 94.688 0 591 87 11 0 0 0 4.772E-17 1 58208 103.9 103.9 1 1.0258 1.1917 0 229030000 113790000 115240000 38623 716 14542 14940 60661 60661 VQDTSNTGLGEDIIHQLSK 19 1 0 Unmodified _VQDTSNTGLGEDIIHQLSK_ 0 0 0 A8K330;Q8IWA0;Q05D27 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1032.0309 2 1028.02128 2054.02801 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.872 1 93.872 93.372 94.372 0 0 0 0 0.014147 1 58300 43.03 29.602 1 38624 716 14542 14940 60662 60662 VQDTSNTGLGEDIIHQLSK 19 1 0 Unmodified _VQDTSNTGLGEDIIHQLSK_ 0 0 0 A8K330;Q8IWA0;Q05D27 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.6887 3 685.683281 2054.02801 72466.19 0.7373 0.00050555 -0.11236 -7.7042E-05 0.62494 0.00042851 686.017554792642 688.354683437439 108.5 0.73941 108.5 108.04 108.78 0 238 36 10 0 0 0 2.257E-06 2 62166 73.448 73.448 1 1.4139 1.2106 0 73246000 30609000 42637000 38625 716 14542 14940 60663;60664 60663 VQDTSNTGLGEDIIHQLSK 19 1 0 Unmodified _VQDTSNTGLGEDIIHQLSK_ 0 0 0 A8K330;Q8IWA0;Q05D27 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.0182 3 685.683281 2054.02801 72632.04 0.60091 0.00041203 0.23488 0.00016105 0.83579 0.00057309 686.017647140819 688.355429139943 108.36 1.0012 108.36 107.91 108.92 0 267 50 13 0 0 0 4.0255E-06 2 61245 69.763 69.763 1 1.4046 1.1958 0 84837000 34686000 50151000 38626 716 14542 14940 60665;60666 60666 VQEAIIHFR 9 0 1 Unmodified _VQEAIIHFR_ 0 0 0 H0YIW2;B3KMP2;Q2M2R1;Q4KMX6;A8KAQ7;A5D8X2;A0A024RBJ3;Q9UJX3 H0YIW2 H0YIW2 ANAPC7 Anaphase-promoting complex subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 371.5452 3 371.545219 1111.61383 104827.7 0.3237 0.00012027 -0.29428 -0.00010934 0.029425 1.0933E-05 371.545004532465 374.881074336969 56.364 0.3051 56.364 56.244 56.55 3.8147E-06 76 26 5 0 0 0 0.007505 2 31732 48.283 40.358 1 1.0854 1.1022 0 9832300 3864400 5967900 38627 341 14543 14941 60667;60668 60668 VQEAIIHFR 9 0 1 Unmodified _VQEAIIHFR_ 0 0 0 H0YIW2;B3KMP2;Q2M2R1;Q4KMX6;A8KAQ7;A5D8X2;A0A024RBJ3;Q9UJX3 H0YIW2 H0YIW2 ANAPC7 Anaphase-promoting complex subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 374.882 3 371.545219 1111.61383 102843.2 0.094672 3.5175E-05 -0.75139 -0.00027918 -0.65672 -0.000244 371.544825920841 374.881025499993 54.957 0.36394 54.957 54.777 55.141 3.8147E-06 59 30 4 0 0 0 0.016037 1 31402 37.191 28.491 1 1.2363 1.2342 0 7010900 2865000 4145900 38628 341 14543 14941 60669 60669 VQEAINSLGGSVFPK 15 1 0 Unmodified _VQEAINSLGGSVFPK_ 0 0 0 O75794;X6RKY7;X6RA30 O75794 O75794 CDC123 Cell division cycle protein 123 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 777.4243 2 773.417205 1544.81986 64225.47 1.0569 0.00081742 1.1567 0.00089459 2.2136 0.001712 773.417672284158 777.424078007728 92.193 0.59637 92.193 91.904 92.501 0 193 57 7 0 0 0 4.2493E-10 1 55776 114.24 84.472 1 2.8267 2.7701 0 21229000 5728600 15501000 38629 1413 14544 14942 60670 60670 VQEAINSLGGSVFPK 15 1 0 Unmodified _VQEAINSLGGSVFPK_ 0 0 0 O75794;X6RKY7;X6RA30 O75794 O75794 CDC123 Cell division cycle protein 123 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.424 2 773.417205 1544.81986 68818.43 0.80003 0.00061875 1.3432 0.0010388 2.1432 0.0016576 773.417565745915 777.423709887236 105.75 0.46417 105.75 105.53 106 0 70 26 5 0 0 0 0.00022275 1 60340 67.997 53.578 1 1.9272 1.5277 0 4245300 1360400 2884900 38630 1413 14544 14942 60671 60671 VQEAINSLGGSVFPK 15 1 0 Unmodified _VQEAINSLGGSVFPK_ 0 0 0 O75794;X6RKY7;X6RA30 O75794 O75794 CDC123 Cell division cycle protein 123 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 773.4175 2 773.417205 1544.81986 69897.47 0.74161 0.00057357 0.40308 0.00031175 1.1447 0.00088532 773.417068514081 777.926932853502 105.56 0.45409 105.56 105.37 105.82 0 91 33 5 0 0 0 0.0085521 1 59407 35.645 15.342 1 2.0091 1.6299 0 2818200 1044900 1773200 38631 1413 14544 14942 60672 60672 VQEFEHVNGR 10 0 1 Unmodified _VQEFEHVNGR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 612.8026 2 607.799269 1213.58398 75862.45 0.39383 0.00023937 1.4738 0.00089579 1.8676 0.0011352 607.799478127372 612.803370194903 22.554 0.64209 22.554 22.179 22.821 0 121 40 6 0 0 0 7.4352E-06 1 8558 107.15 77.681 1 0.82069 0.8532 0 20943000 12074000 8869500 38632 515 14545 14943 60673 60673 VQEFEHVNGR 10 0 1 Unmodified _VQEFEHVNGR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.5354 3 405.535271 1213.58398 94551.58 -0.094645 -3.8382E-05 0.57353 0.00023259 0.47888 0.0001942 405.535510416516 408.871193851285 22.547 0.43927 22.547 22.382 22.821 0 136 27 8 0 0 0 0.022633 1 8645 33.229 29.584 1 0.61157 0.62904 0 25100000 15376000 9724300 38633 515 14545 14943 60674 60674 VQEFEHVNGR 10 0 1 Unmodified _VQEFEHVNGR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 405.5353 3 405.535271 1213.58398 93523.85 -0.23738 -9.6264E-05 0.34879 0.00014145 0.11142 4.5184E-05 405.535438157313 408.871398605012 22.26 0.46336 22.26 22.124 22.588 0 82 20 6 0 0 0 0.026971 1 8303 31.431 27.087 1 0.69656 0.80352 0 55032000 33491000 21541000 38634 515 14545 14943 60675 60675 VQEFEHVNGR 10 0 1 Unmodified _VQEFEHVNGR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 612.8033 2 607.799269 1213.58398 NaN NaN NaN 1.7724 0.0010772 NaN NaN NaN NaN 22.29 0.29566 22.29 22.14 22.436 0 0 0 0 4.3219E-08 1 8245 114.84 55.041 1 NaN NaN 0 18244000 0 18244000 38635 515 14545 14943 60676 60676 VQEFEHVNGR 10 0 1 Unmodified _VQEFEHVNGR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 607.7997 2 607.799269 1213.58398 NaN NaN NaN 1.6915 0.0010281 NaN NaN NaN NaN 22.274 0.48639 22.274 22.124 22.611 0 0 0 0 8.3464E-08 1 8326 111.61 81.037 1 NaN NaN 0 28505000 28505000 0 38636 515 14545 14943 60677 60677 VQEHEDSGDSEVENEAK 17 1 0 Unmodified _VQEHEDSGDSEVENEAK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 955.4117 2 951.403406 1900.79226 63166.38 0.46316 0.00044065 -0.29016 -0.00027605 0.17301 0.0001646 951.905146373216 955.41029984107 17.731 0.19066 17.731 17.617 17.808 0 27 5 6 0 0 0 3.7823E-45 2 4840 169.09 163.59 1 1.3921 1.4087 0 6799300 2267200 4532100 38637 876 14546 14944 60678;60679 60678 VQEHEDSGDSEVENEAK 17 1 0 Unmodified _VQEHEDSGDSEVENEAK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 637.2761 3 634.604696 1900.79226 75586.89 0.43322 0.00027492 -0.0034155 -2.1675E-06 0.4298 0.00027276 634.604687746194 637.276150445063 17.725 0.26248 17.725 17.577 17.84 0 41 8 7 0 0 0 3.0794E-10 2 4845 100.77 100.77 1 1.5488 1.5789 0 28120000 9508700 18611000 38638 876 14546 14944 60680;60681 60680 VQEHEDSGDSEVENEAK 17 1 0 Unmodified _VQEHEDSGDSEVENEAK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 951.4037 2 951.403406 1900.79226 62653.52 0.39425 0.00037509 0.046636 4.437E-05 0.44088 0.00041946 951.403397134482 955.410166847477 17.716 0.28584 17.716 17.579 17.865 0 48 10 7 0 0 0 2.4202E-26 2 4582 150.05 147.91 1 1.3347 1.3955 0 10263000 4384500 5878100 38639 876 14546 14944 60682;60683 60683 VQEHEDSGDSEVENEAK 17 1 0 Unmodified _VQEHEDSGDSEVENEAK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 637.6113 3 634.604696 1900.79226 76354.35 0.42637 0.00027058 0.077925 4.9452E-05 0.50429 0.00032003 634.604562897774 637.276185508929 17.692 0.35533 17.692 17.557 17.912 0 83 13 10 0 0 0 5.0368E-05 1 4657 38.227 38.227 1 1.4315 1.4872 0 33616000 14439000 19177000 38640 876 14546 14944 60684 60684 VQEHEDSGDSEVENEAK 17 1 0 Unmodified _VQEHEDSGDSEVENEAK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 634.6051 3 634.604696 1900.79226 76644.52 0.03455 2.1926E-05 0.54615 0.00034659 0.5807 0.00036851 634.6049523999 637.276464806965 19.394 0.30369 19.394 19.245 19.549 0 55 11 7 0 0 0 7.1141E-06 1 5105 69.081 69.081 1 1.4787 1.1843 0 7306500 3085900 4220700 38641 876 14546 14944 60685 60685 VQEHEDSGDSEVENEAK 17 1 0 Unmodified _VQEHEDSGDSEVENEAK_ 0 0 0 B2RAX6;Q9Y5J1 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 637.2765 3 634.604696 1900.79226 76894.56 0.12917 8.1974E-05 0.25937 0.00016459 0.38854 0.00024657 634.939132967148 637.276176985034 19.465 0.30804 19.465 19.306 19.614 0 123 19 8 0 0 0 0.024201 1 4735 15.521 15.521 1 1.7264 1.3708 0 4017500 1284500 2732900 38642 876 14546 14944 60686 60686 VQELETSLAELR 12 0 1 Unmodified _VQELETSLAELR_ 0 0 0 Q08379;B7ZC06 Q08379 Q08379 GOLGA2 Golgin subfamily A member 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 699.3793 2 694.375006 1386.73546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.29 1 89.29 88.79 89.79 0 0 0 0 0.0057556 1 53901 63.073 36.559 1 38643 1692 14547 14945 60687 60687 VQELQQGAFGR 11 0 1 Unmodified _VQELQQGAFGR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 621.8279 2 616.822744 1231.63093 76655.3 0.7364 0.00045423 -0.17279 -0.00010658 0.56361 0.00034765 616.823043007844 621.827086042175 44.763 1.0095 44.763 44.482 45.492 -3.8147E-06 334 91 6 0 0 0 7.0847E-10 3 24043 126.82 117.39 1 1.1971 1.267 0 41146000 19749000 21397000 38644 1933 14548 14946 60688;60689;60690 60689 VQELQQGAFGR 11 0 1 Unmodified _VQELQQGAFGR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.3249 2 616.822744 1231.63093 76515.45 0.1886 0.00011633 -0.70425 -0.0004344 -0.51565 -0.00031807 616.823015626366 621.826305460054 51.569 0.98161 51.569 51.233 52.215 0 324 80 7 0 0 0 0.00036511 1 25493 84.213 74.78 1 1.6471 1.3488 0 16493000 4557600 11935000 38645 1933 14548 14946 60691 60691 VQELQQGAFGR 11 0 1 Unmodified _VQELQQGAFGR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 616.8227 2 616.822744 1231.63093 NaN NaN NaN 0.35452 0.00021868 NaN NaN NaN NaN 52.165 0.70794 52.165 51.982 52.69 0 0 0 0 4.5E-08 1 25143 112.11 112.11 1 NaN NaN 0 4338000 4338000 0 38646 1933 14548 14946 60692 60692 VQENCIDLVGR 11 0 1 Unmodified _VQENCIDLVGR_ 0 0 0 O75533;H7C341 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 656.8333 2 651.827169 1301.63978 NaN NaN NaN 0.24665 0.00016077 NaN NaN NaN NaN 60.549 0.24804 60.549 60.398 60.646 -3.8147E-06 0 0 0 0.0045211 1 34598 66.056 38.284 1 NaN NaN 0 3618700 0 3618700 38647 1408 14549 14947 60693 60693 VQENSAYICSR 11 0 1 Unmodified _VQENSAYICSR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8133 2 663.808976 1325.6034 74169.7 0.64224 0.00042632 -0.58449 -0.00038799 0.057752 3.8336E-05 664.310181265481 668.812650500782 29.036 0.1643 29.036 28.96 29.124 0 30 7 5 0 0 0 1.7646E-12 2 13945 142.83 130.78 1 1.0021 1.0917 0 51271000 25909000 25362000 38648 2139 14550 14948 60694;60695 60694 VQENSAYICSR 11 0 1 Unmodified _VQENSAYICSR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.8094 2 663.808976 1325.6034 77684.93 0.51435 0.00034143 -0.079283 -5.2629E-05 0.43506 0.0002888 663.808677268865 669.314571993913 28.248 0.2982 28.248 28.13 28.428 0 45 15 5 0 0 0 5.2585E-10 1 13445 129.7 115.04 1 0.80048 0.78498 0 13946000 8443400 5502300 38649 2139 14550 14948 60696 60696 VQENSAYICSR 11 0 1 Unmodified _VQENSAYICSR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 668.8129 2 663.808976 1325.6034 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33 1 33 32.5 33.5 0 0 0 0 0.0097572 1 14415 59.426 44.275 1 38650 2139 14550 14948 60697 60697 VQENSAYICSR 11 0 1 Unmodified _VQENSAYICSR_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 668.8127 2 663.808976 1325.6034 76290.07 0.46229 0.00030687 -0.18437 -0.00012239 0.27792 0.00018448 663.808793294609 668.812964108895 33.529 0.42073 33.529 33.371 33.792 0 130 33 6 0 0 0 0.0080807 1 14142 51.445 51.445 1 1.2611 1.0463 0 5733600 2564900 3168700 38651 2139 14550 14948 60698 60698 VQEQLGNDVVEK 12 1 0 Unmodified _VQEQLGNDVVEK_ 0 0 0 B7Z3M6;H3BPH4;H3BV55;B2R6D4;A0A0S2Z4J6;O15305 B7Z3M6 B7Z3M6 PMM2 Phosphomannomutase;Phosphomannomutase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.3596 2 679.351531 1356.68851 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.312 1 41.312 40.812 41.812 0 0 0 0 0.0046216 1 21755 64.82 24.468 1 38652 564 14551 14949 60699 60699 VQEQLGNDVVEK 12 1 0 Unmodified _VQEQLGNDVVEK_ 0 0 0 B7Z3M6;H3BPH4;H3BV55;B2R6D4;A0A0S2Z4J6;O15305 B7Z3M6 B7Z3M6 PMM2 Phosphomannomutase;Phosphomannomutase 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 683.3571 2 679.351531 1356.68851 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.428 1 41.428 40.928 41.928 0 0 0 0 0.00064209 1 21830 77.744 28.029 1 38653 564 14551 14949 60700 60700 VQESADELQK 10 1 0 Unmodified _VQESADELQK_ 0 0 0 C9J1Z8;A4D0Z3;B4DLJ3;P84085 C9J1Z8 C9J1Z8 ARF5 ADP-ribosylation factor 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.7946 2 573.785492 1145.55643 80414.98 0.83115 0.0004769 -0.15763 -9.0447E-05 0.67352 0.00038646 573.785191738069 577.792413724228 26.056 0.57695 26.056 25.793 26.37 0 125 33 7 0 0 0 0.029831 1 11543 42.869 2.802 1 0.89841 0.96557 0 39862000 19760000 20102000 38654 660 14552 14950 60701 60701 VQEYGELDAK 10 1 0 Unmodified _VQEYGELDAK_ 0 0 0 E7EW05;B4DT66;Q9NVU7 E7EW05 E7EW05 SDAD1 Protein SDA1 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 576.2842 2 576.282586 1150.55062 NaN NaN NaN 1.7523 0.0010098 NaN NaN NaN NaN 41.476 0.2932 41.476 41.327 41.62 0 0 0 0 0.045468 1 19219 47.96 30.72 1 NaN NaN 0 1430400 1430400 0 38655 1032 14553 14951 60702 60702 VQFDGTNSAFK 11 1 0 Unmodified _VQFDGTNSAFK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.3028 2 607.296027 1212.5775 78923.79 0.25734 0.00015628 0.04625 2.8088E-05 0.30359 0.00018437 607.29602068208 611.303024586914 54.856 0.51472 54.856 54.582 55.097 0 165 49 5 0 0 0 2.3195E-08 2 30804 121.73 112.32 1 0.72509 0.78313 0 42267000 24423000 17844000 38656 895 14554 14952 60703;60704 60704 VQFDGTNSAFK 11 1 0 Unmodified _VQFDGTNSAFK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3038 2 607.296027 1212.5775 78968.2 0.50127 0.00030442 0.16796 0.000102 0.66923 0.00040642 607.296202163029 611.302999045121 53.85 0.67725 53.85 53.599 54.276 0 207 64 5 0 0 0 4.6535E-10 2 30770 130.66 110.14 1 0.7063 0.76691 0 39263000 22116000 17148000 38657 895 14554 14952 60705;60706 60705 VQFDGTNSAFK 11 1 0 Unmodified _VQFDGTNSAFK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.3037 2 607.296027 1212.5775 NaN NaN NaN 0.17008 0.00010329 NaN NaN NaN NaN 63.676 0.78065 63.676 63.337 64.118 0 0 0 0 0.053247 1 32715 43.308 35.74 1 NaN NaN 0 4268300 0 4268300 38658 895 14554 14952 60707 60707 VQFDGTNSAFK 11 1 0 Unmodified _VQFDGTNSAFK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.2963 2 607.296027 1212.5775 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.443 1 63.443 62.943 63.943 0 0 0 0 0.036275 1 32625 46.158 21.235 1 38659 895 14554 14952 60708 60708 VQFDGTNSAFK 11 1 0 Unmodified _VQFDGTNSAFK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 611.3032 2 607.296027 1212.5775 77852.3 0.2311 0.00014034 1.2091 0.00073428 1.4402 0.00087462 607.296260081508 611.303275655682 64.304 1.0827 64.304 63.859 64.942 0 434 89 8 0 0 0 0.03748 2 32295 36.422 36.422 1 1.1899 0.96822 0 7017900 3590500 3427400 38660 895 14554 14952 60709;60710 60710 VQFHLK 6 1 0 Unmodified _VQFHLK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 386.229 2 386.229231 770.443909 96428.46 0.17835 6.8884E-05 -0.17311 -6.686E-05 0.0052388 2.0234E-06 386.229136270897 390.236103368136 34.908 0.53921 34.908 34.724 35.263 0 174 47 7 0 0 0 0.058999 1 15489 69.39 29.028 1 1.0469 0.88715 0 59664000 29365000 30298000 38661 2148 14555 14953 60711 60711 VQFLEQQNK 9 1 0 Unmodified _VQFLEQQNK_ 0 0 0 B2R853;B4DRY0 B2R853 B2R853 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.3015 2 567.301113 1132.58767 NaN NaN NaN -0.0069885 -3.9646E-06 NaN NaN NaN NaN 42.171 0.48706 42.171 41.818 42.305 0 0 0 0 5.0899E-11 1 22309 132.08 106.35 1 NaN NaN 0 21105000 21105000 0 + 38662 859 14556 14954 60712 60712 VQFLEQQNK 9 1 0 Unmodified _VQFLEQQNK_ 0 0 0 B2R853;B4DRY0 B2R853 B2R853 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.3004 2 567.301113 1132.58767 NaN NaN NaN -0.1076 -6.1041E-05 NaN NaN NaN NaN 40.776 0.26692 40.776 40.632 40.899 0 0 0 0 1.6711E-24 1 21808 163.77 135.6 1 NaN NaN 0 24943000 24943000 0 + 38663 859 14556 14954 60713 60713 VQFWDSATGTLVK 13 1 0 Unmodified _VQFWDSATGTLVK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;A0A0J9YWK2;J3KSI1;A0A0J9YX18 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.3875 2 726.380091 1450.74563 72344.86 0.54981 0.00039937 -0.38307 -0.00027826 0.16674 0.00012111 726.379951540685 730.387091456462 99.244 0.82542 99.244 98.931 99.756 0 321 68 7 0 0 0 0.00015631 2 60696 86.014 68.541 1 0.79541 0.8568 0 38004000 20245000 17759000 38664 1955 14557 14955 60714;60715 60715 VQFWDSATGTLVK 13 1 0 Unmodified _VQFWDSATGTLVK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;A0A0J9YWK2;J3KSI1;A0A0J9YX18 Q969X6 Q969X6 CIRH1A Cirhin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.8885 2 726.380091 1450.74563 NaN NaN NaN -0.20543 -0.00014922 NaN NaN NaN NaN 98.397 0.70892 98.397 98.191 98.9 0 0 0 0 0.0089694 1 61595 53.683 34.903 1 NaN NaN 0 33280000 0 33280000 38665 1955 14557 14955 60716 60716 VQFWDSATGTLVK 13 1 0 Unmodified _VQFWDSATGTLVK_ 0 0 0 Q969X6;H3BSH7;A0A0J9YWM9;A0A0J9YXV4;A0A0J9YWK2;J3KSI1;A0A0J9YX18 Q969X6 Q969X6 CIRH1A Cirhin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.3807 2 726.380091 1450.74563 72030.86 0.97302 0.00070678 -0.25068 -0.00018209 0.72234 0.00052469 726.379894565046 730.386753156612 111.76 0.66498 111.76 111.57 112.23 0 206 40 8 0 0 0 0.0010478 1 64911 59.418 46.326 1 1.1902 0.95686 0 21701000 9957500 11744000 38666 1955 14557 14955 60717 60717 VQGGALEDSQLVAGVAFK 18 1 0 Unmodified _VQGGALEDSQLVAGVAFK_ 0 0 0 Q6IBT3;Q53HV2;Q99832;B7Z7I4;B7Z1C9 Q6IBT3 Q6IBT3 CCT7 T-complex protein 1 subunit eta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.4872 2 894.978158 1787.94176 NaN NaN NaN -0.29289 -0.00026213 NaN NaN NaN NaN 105 0.32613 105 104.79 105.12 0 0 0 0 1.9985E-11 1 64932 93.011 79.583 1 NaN NaN 0 7318500 0 7318500 38667 1791 14558 14956 60718 60718 VQGGALEDSQLVAGVAFK 18 1 0 Unmodified _VQGGALEDSQLVAGVAFK_ 0 0 0 Q6IBT3;Q53HV2;Q99832;B7Z7I4;B7Z1C9 Q6IBT3 Q6IBT3 CCT7 T-complex protein 1 subunit eta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.4877 2 894.978158 1787.94176 NaN NaN NaN -0.31822 -0.0002848 NaN NaN NaN NaN 104.21 0.39389 104.21 104.06 104.46 0 0 0 0 0.00094693 1 66119 54.7 45.267 1 NaN NaN 0 7251100 0 7251100 38668 1791 14558 14956 60719 60719 VQGGALEDSQLVAGVAFK 18 1 0 Unmodified _VQGGALEDSQLVAGVAFK_ 0 0 0 Q6IBT3;Q53HV2;Q99832;B7Z7I4;B7Z1C9 Q6IBT3 Q6IBT3 CCT7 T-complex protein 1 subunit eta MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 898.9863 2 894.978158 1787.94176 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.64 1 116.64 116.14 117.14 7.6294E-06 0 0 0 0.026198 1 68567 41.092 32.787 1 38669 1791 14558 14956 60720 60720 VQGGALEDSQLVAGVAFK 18 1 0 Unmodified _VQGGALEDSQLVAGVAFK_ 0 0 0 Q6IBT3;Q53HV2;Q99832;B7Z7I4;B7Z1C9 Q6IBT3 Q6IBT3 CCT7 T-complex protein 1 subunit eta ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 899.4874 2 894.978158 1787.94176 NaN NaN NaN 3.0373 0.0027183 NaN NaN NaN NaN 116.51 0.5293 116.51 116.34 116.87 0 0 0 0 0.0061296 1 67547 43.761 29.342 1 NaN NaN 0 1733300 0 1733300 38670 1791 14558 14956 60721 60721 VQGLLEEEAAAR 12 0 1 Unmodified _VQGLLEEEAAAR_ 0 0 0 Q6SPF0;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.3458 2 643.340966 1284.66738 75748.28 0.88561 0.00056975 -0.070078 -4.5084E-05 0.81553 0.00052466 643.340726298266 648.345354436784 59.415 0.53447 59.415 59.031 59.566 -3.8147E-06 224 40 8 0 0 0 0.0027346 2 33671 66.595 55.374 1 0.82886 0.92016 0 70026000 37204000 32822000 38671 1861 14559 14957 60722;60723 60722 VQGLLEEEAAAR 12 0 1 Unmodified _VQGLLEEEAAAR_ 0 0 0 Q6SPF0;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.3417 2 643.340966 1284.66738 74924.27 0.82534 0.00053098 0.14291 9.1938E-05 0.96825 0.00062291 643.34094730007 648.345374311529 58.279 0.3259 58.279 58.068 58.393 3.8147E-06 106 21 6 0 0 0 1.5157E-05 2 33774 126.71 126.71 1 0.81765 0.93134 0 106100000 54678000 51420000 38672 1861 14559 14957 60724;60725 60725 VQGLLEEEAAAR 12 0 1 Unmodified _VQGLLEEEAAAR_ 0 0 0 Q6SPF0;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.3459 2 643.340966 1284.66738 76081.15 0.5123 0.00032959 0.021941 1.4116E-05 0.53424 0.0003437 643.340757694672 648.345181221914 68.999 0.55878 68.999 68.676 69.235 0 216 38 8 0 0 0 0.0001724 2 36024 91.855 91.549 1 1.4545 1.1906 0 13260000 6349100 6910500 38673 1861 14559 14957 60726;60727 60726 VQGLLEEEAAAR 12 0 1 Unmodified _VQGLLEEEAAAR_ 0 0 0 Q6SPF0;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.3461 2 643.340966 1284.66738 75989.52 0.6065 0.00039018 -0.04322 -2.7805E-05 0.56328 0.00036238 643.340723793618 648.345100040715 69.518 0.50462 69.518 69.243 69.748 0 204 34 8 0 0 0 1.6998E-05 2 35576 107.83 107.83 1 1.4379 1.1718 0 12660000 5168900 7490700 38674 1861 14559 14957 60728;60729 60728 VQGSDSDEEVVVATTR 16 0 1 Unmodified _VQGSDSDEEVVVATTR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.4086 2 846.407763 1690.80097 66210.88 0.64102 0.00054256 -0.11464 -9.7034E-05 0.52637 0.00044553 846.407472779963 851.913261462747 51.149 0.57523 51.149 50.771 51.346 0 137 52 5 0 0 0 9.3491E-09 1 28245 107.37 107.37 1 0.82517 0.8416 0 30613000 18836000 11778000 38675 363 14560 14958 60730 60730 VQGSDSDEEVVVATTR 16 0 1 Unmodified _VQGSDSDEEVVVATTR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 846.9095 2 846.407763 1690.80097 65840.68 0.81539 0.00069015 0.14063 0.00011903 0.95602 0.00080919 846.407664450202 851.411526691527 50.076 0.42502 50.076 49.794 50.219 0 181 36 7 0 0 0 9.5502E-25 2 28221 143.98 143.98 1 0.92312 1.0106 0 32789000 18157000 14632000 38676 363 14560 14958 60731;60732 60731 VQGSDSDEEVVVATTR 16 0 1 Unmodified _VQGSDSDEEVVVATTR_ 0 0 0 A0A024RCN6;P26640;A0A140T936 A0A024RCN6 A0A024RCN6 VARS Valine--tRNA ligase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 846.91 2 846.407763 1690.80097 66637.32 0.4996 0.00042286 0.086375 7.3109E-05 0.58597 0.00049597 846.909625361303 851.411860274872 59.386 0.71666 59.386 59.054 59.771 3.8147E-06 242 56 7 0 0 0 0.00015365 2 30212 62.042 62.042 1 0.5893 0.49695 0 3031900 1827900 1204000 38677 363 14560 14958 60733;60734 60734 VQGVFQR 7 0 1 Unmodified _VQGVFQR_ 0 0 0 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 417.235 2 417.235045 832.455536 94782.69 -0.4047 -0.00016886 0.5519 0.00023027 0.1472 6.1418E-05 417.235204785567 422.239292458065 33.093 0.41663 33.093 32.918 33.335 0 129 34 5 0 0 0 0.026979 2 14462 84.359 58.25 1 1.3554 1.1496 0 9275700 3757200 5518500 38678 925 14561 14959 60735;60736 60735 VQGVFQR 7 0 1 Unmodified _VQGVFQR_ 0 0 0 B3KQ21;Q9NYH9;B4DSL9;B7Z9G4 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 417.235 2 417.235045 832.455536 94392.98 -0.47867 -0.00019972 0.703 0.00029332 0.22433 9.3597E-05 417.235235272977 422.239367213863 33.101 0.37376 33.101 32.939 33.313 0 107 28 5 0 0 0 0.02673 1 13972 77.374 54.752 1 1.3692 1.1061 0 10778000 4027600 6750100 38679 925 14561 14959 60737 60737 VQIFTADLSEIPR 13 0 1 Unmodified _VQIFTADLSEIPR_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q96DQ7 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 744.9074 2 744.906473 1487.79839 NaN NaN NaN -0.51748 -0.00038548 NaN NaN NaN NaN 111.63 0.35426 111.63 111.47 111.83 0 0 0 0 0.0022904 1 70281 70.488 35.264 1 NaN NaN 0 4600100 4600100 0 38680 898 14562 14960 60738 60738 VQIFTADLSEIPR 13 0 1 Unmodified _VQIFTADLSEIPR_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q96DQ7 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.9061 2 744.906473 1487.79839 72032.91 0.71146 0.00052997 -0.7272 -0.00054169 -0.015739 -1.1724E-05 744.90631796162 749.910229689859 111.07 0.3521 111.07 110.92 111.28 0 72 25 4 0 0 0 0.00015608 1 71608 85.958 59.839 1 0.54553 0.54733 0 6731300 3668200 3063100 38681 898 14562 14960 60739 60739 VQIFTADLSEIPR 13 0 1 Unmodified _VQIFTADLSEIPR_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q96DQ7 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 744.9073 2 744.906473 1487.79839 73187.95 1.0428 0.00077677 -0.45904 -0.00034194 0.58374 0.00043483 744.906197933918 749.910429409026 122.78 0.35562 122.78 122.63 122.99 7.6294E-06 58 16 5 0 0 0 0.0014362 1 73355 57.836 47.883 1 1.2171 1.0174 0 3516300 1344200 2172100 38682 898 14562 14960 60740 60740 VQIFTADLSEIPR 13 0 1 Unmodified _VQIFTADLSEIPR_ 0 0 0 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q96DQ7 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.9072 2 744.906473 1487.79839 73003.9 0.89143 0.00066404 -0.52093 -0.00038804 0.37051 0.00027599 744.906285482093 749.910331219926 122.66 0.50256 122.66 122.38 122.88 0 92 24 8 0 0 0 0.002343 1 72322 54.143 38.878 1 1.3967 1.1879 0 4600100 2102500 2497600 38683 898 14562 14960 60741 60741 VQISPDSGGLPER 13 0 1 Unmodified _VQISPDSGGLPER_ 0 0 0 A0A087WTP3;Q92945;B4DV73;M0QYH3;M0QXW7 A0A087WTP3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.858 2 677.851698 1353.68884 73832.59 0.63324 0.00042924 -2.6469 -0.0017942 -2.0137 -0.001365 678.352574361911 682.854454503717 57.854 0.79124 57.854 57.419 58.21 0 166 63 5 0 0 0 0.00013633 1 32810 81.017 73.957 1 2.0936 2.1252 0 15063000 4927100 10136000 38684 403 14563 14961 60742 60742 VQIYTADISEIPK 13 1 0 Unmodified _VQIYTADISEIPK_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 742.9091 2 738.900857 1475.78716 71274.49 0.78133 0.00057732 0.014229 1.0514E-05 0.79556 0.00058784 738.900777170151 742.907967007505 95.165 0.64505 95.165 94.918 95.563 -7.6294E-06 252 48 7 0 0 0 1.8605E-05 2 57829 99.343 87.13 1 0.82703 0.89246 0 41836000 21644000 20192000 38685 1435 14564 14962 60743;60744 60744 VQIYTADISEIPK 13 1 0 Unmodified _VQIYTADISEIPK_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 742.9086 2 738.900857 1475.78716 71275.5 0.90687 0.00067009 0.064815 4.7892E-05 0.97168 0.00071798 738.900780295122 742.908063606716 94.421 0.62001 94.421 94.192 94.812 7.6294E-06 280 51 8 0 0 0 6.5122E-05 2 58607 95.477 82.295 1 0.82465 0.91676 0 50612000 27390000 23222000 38686 1435 14564 14962 60745;60746 60745 VQIYTADISEIPK 13 1 0 Unmodified _VQIYTADISEIPK_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 742.9083 2 738.900857 1475.78716 70965.3 0.85537 0.00063203 0.20176 0.00014908 1.0571 0.00078111 738.900965868567 742.908058044157 108.65 0.54399 108.65 108.38 108.92 0 158 26 8 0 0 0 0.00012317 2 62356 90.653 87.001 1 1.6693 1.3321 0 20070000 7626300 12443000 38687 1435 14564 14962 60747;60748 60747 VQIYTADISEIPK 13 1 0 Unmodified _VQIYTADISEIPK_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 738.9011 2 738.900857 1475.78716 NaN NaN NaN -0.0595 -4.3964E-05 NaN NaN NaN NaN 108.53 0.50017 108.53 108.33 108.83 7.6294E-06 0 0 0 0.00076991 1 61452 79.693 63.315 1 NaN NaN 0 7813600 7813600 0 38688 1435 14564 14962 60749 60749 VQLAELIDCLDK 12 1 0 Unmodified _VQLAELIDCLDK_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 708.8741 2 708.873785 1415.73302 72646.99 1.1063 0.00078422 -0.68482 -0.00048545 0.42147 0.00029877 708.873408652578 712.880438401421 119.17 0.39911 119.17 118.95 119.34 -7.6294E-06 90 25 5 0 0 0 0.00073439 2 76603 66.595 52.826 1 0.66424 0.67507 0 6350300 4555400 1794800 38689 1224 14565 14963 60750;60751 60750 VQLAELIDCLDK 12 1 0 Unmodified _VQLAELIDCLDK_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 708.8724 2 708.873785 1415.73302 73028.85 0.6699 0.00047487 -0.52009 -0.00036868 0.14981 0.00010619 708.87355371432 712.880438489389 118.66 0.4316 118.66 118.41 118.84 0 104 26 6 0 0 0 0.0003692 2 78048 72.006 53.956 1 0.64342 0.66463 0 11444000 6041000 5402900 38690 1224 14565 14963 60752;60753 60752 VQLAELIDCLDK 12 1 0 Unmodified _VQLAELIDCLDK_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 712.8815 2 708.873785 1415.73302 NaN NaN NaN -0.3392 -0.00024045 NaN NaN NaN NaN 131.82 0.40878 131.82 131.63 132.04 0 0 0 0 0.0068733 2 80055 59.542 31.8 1 NaN NaN 0 1274700 0 1274700 38691 1224 14565 14963 60754;60755 60755 VQLAELIDCLDK 12 1 0 Unmodified _VQLAELIDCLDK_ 0 0 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 712.8813 2 708.873785 1415.73302 71376.33 0.99583 0.00070592 0.99357 0.00070432 1.9894 0.0014102 709.375607029669 712.881514717312 131.61 0.43637 131.61 131.39 131.82 0 38 15 5 0 0 0 0.020076 1 78956 39.625 29.101 1 1.7254 1.3796 0 4142400 1172900 2969600 38692 1224 14565 14963 60756 60756 VQLAMQTYEMVDK 13 1 0 2 Oxidation (M) _VQLAM(ox)QTYEM(ox)VDK_ VQLAM(1)QTYEM(1)VDK VQLAM(56.55)QTYEM(56.55)VDK 0 2 0 E9PEN0;B7Z6R2;A0A1B0GW41;Q8WYH8;A4KYM7;Q9UNL4;B4DDF2 E9PEN0 E9PEN0 ING5;ING4 Inhibitor of growth protein 5;Inhibitor of growth protein 4;Inhibitor of growth protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 798.3788 2 794.373291 1586.73203 NaN NaN NaN 0.31711 0.0002519 NaN NaN NaN NaN 54.019 0.3828 54.019 53.901 54.283 0 0 0 0 0.0010876 1 30374 56.551 41.613 1 NaN NaN 0 4855500 0 4855500 38693 633 14566 14964 60757 60757 492;493 VQLAMQTYEMVDK 13 1 0 2 Oxidation (M) _VQLAM(ox)QTYEM(ox)VDK_ VQLAM(1)QTYEM(1)VDK VQLAM(52.69)QTYEM(52.69)VDK 0 2 0 E9PEN0;B7Z6R2;A0A1B0GW41;Q8WYH8;A4KYM7;Q9UNL4;B4DDF2 E9PEN0 E9PEN0 ING5;ING4 Inhibitor of growth protein 5;Inhibitor of growth protein 4;Inhibitor of growth protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.38 2 794.373291 1586.73203 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.57 1 53.57 53.07 54.07 0 0 0 0 0.0098944 1 30626 52.693 37.755 1 38694 633 14566 14964 60758 60758 492;493 VQLDLAETDLSQGVAR 16 0 1 Unmodified _VQLDLAETDLSQGVAR_ 0 0 0 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8 B3KY56 B3KY56 FAM62A;ESYT1 Extended synaptotagmin-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 862.9534 2 857.95214 1713.88973 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.303 1 97.303 96.803 97.803 0 0 0 0 0.0001418 1 59351 83.204 61.831 1 38695 320 14567 14965 60759 60759 VQLDVFTLSGFR 12 0 1 Unmodified _VQLDVFTLSGFR_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.3779 2 691.377352 1380.74015 74494.76 0.94759 0.00065514 -0.57585 -0.00039813 0.37174 0.00025701 691.377592272681 696.881634664118 134.1 0.40042 134.1 133.88 134.28 0 81 17 7 0 0 0 0.010019 1 81728 46.706 46.706 1 1.7966 1.5238 0 5110600 1785100 3325400 38696 1396 14568 14966 60760 60760 VQLFEDPTVDK 11 1 0 Unmodified _VQLFEDPTVDK_ 0 0 0 A0A024R669;A0A024R688;P51948 A0A024R669 A0A024R669 MNAT1 CDK-activating kinase assembly factor MAT1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.8334 2 645.832443 1289.65033 NaN NaN NaN 0.19663 0.00012699 NaN NaN NaN NaN 78.338 0.45944 78.338 78.122 78.581 7.6294E-06 0 0 0 0.015028 2 47480 54.608 41.531 1 NaN NaN 0 3351900 3351900 0 38697 199 14569 14967 60761;60762 60761 VQLISGPPAK 10 1 0 Unmodified _VQLISGPPAK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.3127 2 505.305667 1008.59678 86443.7 0.25057 0.00012661 -0.17032 -8.6063E-05 0.080251 4.0552E-05 505.305617029301 509.31259497968 54.005 0.62864 54.005 53.655 54.283 0 164 50 5 0 0 0 4.4037E-08 1 30297 117.04 96.477 1 0.98651 1.0277 0 29750000 13047000 16703000 38698 684 14570 14968 60763 60763 VQLISGPPAK 10 1 0 Unmodified _VQLISGPPAK_ 0 0 0 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.3127 2 505.305667 1008.59678 86118.2 0.36275 0.0001833 -0.031884 -1.6111E-05 0.33086 0.00016719 505.305399578164 509.312778884065 52.679 0.56361 52.679 52.409 52.972 0 175 44 6 0 0 0 0.00030431 2 30126 90.657 90.657 1 1.4839 1.5282 0 25189000 9883000 15306000 38699 684 14570 14968 60764;60765 60765 VQLPPEIQLAQR 12 0 1 Unmodified _VQLPPEIQLAQR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;D6RE82 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.4087 2 696.403901 1390.79325 74194.52 0.80917 0.00056351 -0.33454 -0.00023298 0.47462 0.00033053 696.403264000413 701.407876413058 95.625 1.3468 95.625 94.918 96.265 0 450 111 5 0 0 0 6.1539E-05 2 58338 98.044 89.09 1 0.91311 1.0163 0 78528000 37284000 41243000 38700 1618 14571 14969 60766;60767 60767 VQLPPEIQLAQR 12 0 1 Unmodified _VQLPPEIQLAQR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;D6RE82 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.8765 2 696.403901 1390.79325 73739.87 0.77356 0.00053871 -0.2981 -0.0002076 0.47546 0.00033111 696.905136691866 701.407840064158 94.888 0.91609 94.888 94.192 95.108 0 291 77 4 0 0 0 0.020905 1 58657 58.699 49.745 1 0.96841 1.1038 0 100960000 50803000 50161000 38701 1618 14571 14969 60768 60768 VQLPPEIQLAQR 12 0 1 Unmodified _VQLPPEIQLAQR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;D6RE82 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 701.409 2 696.403901 1390.79325 72367.58 0.67025 0.00046677 -0.046661 -3.2495E-05 0.62359 0.00043427 696.403767156524 701.408012154804 108.9 1.4425 108.9 108.25 109.7 7.6294E-06 249 69 4 0 0 0 0.0043354 2 62452 53.756 51.927 1 1.2044 0.9937 0 18761000 8601900 10159000 38702 1618 14571 14969 60769;60770 60769 VQLPPEIQLAQR 12 0 1 Unmodified _VQLPPEIQLAQR_ 0 0 0 Q6PJJ2;P56182;B4DZM3;Q53FR7;D6RE82 Q6PJJ2 Q6PJJ2 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 701.4086 2 696.403901 1390.79325 73609.86 0.59819 0.00041658 -0.087394 -6.0861E-05 0.51079 0.00035572 696.403716417875 701.407983484102 108.82 1.3738 108.82 108.18 109.55 0 246 65 4 0 0 0 0.0047147 2 61823 52.79 51.445 1 1.2227 1.0666 0 26574000 12293000 14281000 38703 1618 14571 14969 60771;60772 60772 VQNDAETLQK 10 1 0 Unmodified _VQNDAETLQK_ 0 0 0 H0Y9Z8 H0Y9Z8 H0Y9Z8 NCAPG MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.2935 2 573.293485 1144.57242 80046.4 0.89369 0.00051235 -0.18638 -0.00010685 0.7073 0.00040549 573.293310867631 577.300446635325 24.249 0.42517 24.249 24.083 24.508 0 82 17 7 0 0 0 0.0034947 2 9987 77.058 38.095 1 0.85334 0.95299 0 62807000 34423000 28384000 38704 1289 14572 14970 60773;60774 60773 VQNDAETLQK 10 1 0 Unmodified _VQNDAETLQK_ 0 0 0 H0Y9Z8 H0Y9Z8 H0Y9Z8 NCAPG MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.2935 2 573.293485 1144.57242 81599.66 0.34894 0.00020005 0.088229 5.0581E-05 0.43717 0.00025063 573.293412638781 577.300633021109 24.043 0.43023 24.043 23.818 24.248 0 64 16 5 0 0 0 0.0008968 2 9785 79.469 37.816 1 0.87269 0.97953 0 76348000 42576000 33771000 38705 1289 14572 14970 60775;60776 60775 VQQIYSDSDLK 11 1 0 Unmodified _VQQIYSDSDLK_ 0 0 0 B3KRA8;Q86YT6 B3KRA8 B3KRA8 MIB1 E3 ubiquitin-protein ligase MIB1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.3362 2 648.327524 1294.6405 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.021 1 47.021 46.521 47.521 0 0 0 0 0.00070241 1 25464 72.325 52.538 1 38706 933 14573 14971 60777 60777 VQQSSESSTSSPSQHEATPGAR 22 0 1 Unmodified _VQQSSESSTSSPSQHEATPGAR_ 0 0 0 B4DLG2;O75152;E9PQ61;B4DYM8;A0A1B0GTU1;A0A024R8H9;A0A1B0GUI2;E9PBY7 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 756.683 3 753.347508 2257.0207 70550.59 0.54504 0.0004106 -0.44343 -0.00033406 0.10161 7.6547E-05 753.68155419522 757.351747943425 15.854 0.33945 15.854 15.744 16.083 9.5367E-07 74 18 7 0 0 0 0.0011854 1 3459 37.552 37.552 1 1.995 2.006 0 9288200 3994300 5293900 38707 996 14574 14972 60778 60778 VQQSSESSTSSPSQHEATPGAR 22 0 1 Unmodified _VQQSSESSTSSPSQHEATPGAR_ 0 0 0 B4DLG2;O75152;E9PQ61;B4DYM8;A0A1B0GTU1;A0A024R8H9;A0A1B0GUI2;E9PBY7 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 753.3463 3 753.347508 2257.0207 70853.95 0.15339 0.00011556 0.39058 0.00029425 0.54397 0.0004098 753.682232355826 756.683954870753 15.555 0.74971 15.555 15.313 16.063 9.5367E-07 338 58 10 0 0 0 1.0429E-05 3 3061 44.089 44.089 1 2.2665 2.2783 0 6628400 1717300 4911000 38708 996 14574 14972 60779;60780;60781 60780 VQQSSESSTSSPSQHEATPGAR 22 0 1 Unmodified _VQQSSESSTSSPSQHEATPGAR_ 0 0 0 B4DLG2;O75152;E9PQ61;B4DYM8;A0A1B0GTU1;A0A024R8H9;A0A1B0GUI2;E9PBY7 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 756.6836 3 753.347508 2257.0207 69921.24 0.39869 0.00030035 0.27703 0.0002087 0.67571 0.00050905 753.682059695118 757.018095848516 17.19 0.2552 17.19 17.052 17.307 0 86 12 11 0 0 0 1.8979E-05 2 3649 34.346 34.346 1 1.9198 1.6648 0 2475100 843200 1631900 38709 996 14574 14972 60782;60783 60782 VQQSSESSTSSPSQHEATPGAR 22 0 1 Unmodified _VQQSSESSTSSPSQHEATPGAR_ 0 0 0 B4DLG2;O75152;E9PQ61;B4DYM8;A0A1B0GTU1;A0A024R8H9;A0A1B0GUI2;E9PBY7 B4DLG2 B4DLG2 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 753.3476 3 753.347508 2257.0207 70602.83 0.10347 7.7951E-05 0.52013 0.00039184 0.6236 0.00046979 753.682282750711 757.018343886269 17.373 0.24534 17.373 17.262 17.508 0 109 17 9 0 0 0 0.022018 1 3398 18.012 18.012 1 1.9798 1.7269 0 1463000 536910 926070 38710 996 14574 14972 60784 60784 VQQTVQDLFGR 11 0 1 Unmodified _VQQTVQDLFGR_ 0 0 0 B7Z4V2;V9HW84;P38646;Q8N1C8;B7Z1V7;B7Z4T3;A1XP52 B7Z4V2 B7Z4V2 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.8439 2 645.843676 1289.6728 75302.8 0.37396 0.00024152 0.20987 0.00013554 0.58383 0.00037706 645.843930488184 650.847793458374 89.184 0.99784 89.184 88.609 89.607 0 275 63 7 0 0 0 0.0017445 2 48349 65.157 47.721 1 1.1624 0.95486 0 8671300 3920300 4751000 38711 1092 14575 14973 60785;60786 60786 VQREPLLTLVK 11 1 1 Unmodified _VQREPLLTLVK_ 0 0 1 Q59EG8;Q13200;Q9NSM5 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 438.6141 3 432.606367 1294.79727 91539.41 0.18781 8.1247E-05 -0.14794 -6.4001E-05 0.039865 1.7246E-05 432.606373297455 438.613814380476 74.249 0.55751 74.249 73.953 74.511 0 154 47 5 0 0 0 0.010163 1 44539 42.976 36.943 1 2.3443 2.6201 0 11742000 3056000 8685900 38712 1707 14576 14974 60787 60787 VQSDGQIVLVDDWIK 15 1 0 Unmodified _VQSDGQIVLVDDWIK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.9548 2 857.954152 1713.89375 65365.52 0.95543 0.00081972 -0.23587 -0.00020236 0.71957 0.00061735 857.954059762116 861.960927311057 115.62 0.68263 115.62 115.27 115.95 0 287 45 10 0 0 0 1.6397E-10 2 73540 121.04 97.054 1 1.0823 1.2267 0 97303000 44277000 53026000 38713 1691 14577 14975 60788;60789 60789 VQSDGQIVLVDDWIK 15 1 0 Unmodified _VQSDGQIVLVDDWIK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 857.9552 2 857.954152 1713.89375 65684.49 0.79343 0.00068073 -0.080506 -6.907E-05 0.71292 0.00061166 857.954165072437 861.961072091732 115.05 0.74123 115.05 114.59 115.33 7.6294E-06 294 47 10 0 0 0 3.9399E-22 2 74867 145.6 119.56 1 1.0935 1.2226 0 107630000 48528000 59105000 38714 1691 14577 14975 60790;60791 60790 VQSDGQIVLVDDWIK 15 1 0 Unmodified _VQSDGQIVLVDDWIK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 862.4631 2 857.954152 1713.89375 65270.48 0.56307 0.00048309 -0.028622 -2.4556E-05 0.53445 0.00045853 857.954256500232 861.961448134613 127.22 0.72405 127.22 126.9 127.62 0 200 30 11 0 0 0 0.00022385 3 76735 73.219 49.232 1 1.5054 1.2171 0 23044000 8836700 14208000 38715 1691 14577 14975 60792;60793;60794 60794 VQSDGQIVLVDDWIK 15 1 0 Unmodified _VQSDGQIVLVDDWIK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 862.4644 2 857.954152 1713.89375 65547.02 0.58211 0.00049942 -0.036534 -3.1344E-05 0.54558 0.00046808 857.9540035843 861.961330359584 127.04 0.71303 127.04 126.81 127.52 0 184 31 11 0 0 0 7.9913E-06 1 75524 94.507 78.617 1 1.4806 1.1892 0 22292000 8132800 14159000 38716 1691 14577 14975 60795 60795 VQSGSESVIQEYVDLR 16 0 1 Unmodified _VQSGSESVIQEYVDLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.9554 2 904.95488 1807.89521 65211.44 0.73895 0.00066872 0.13778 0.00012468 0.87673 0.0007934 904.954502005949 910.460687145772 103.51 0.5901 103.51 103.19 103.78 0 178 47 6 0 0 0 6.03E-12 3 63858 113.24 100.66 1 1.596 1.6536 0 20495000 6429700 14065000 38717 1754 14578 14976 60796;60797;60798 60796 VQSGSESVIQEYVDLR 16 0 1 Unmodified _VQSGSESVIQEYVDLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 910.4617 2 904.95488 1807.89521 65193.93 0.8196 0.0007417 -0.13001 -0.00011765 0.6896 0.00062405 904.954704079468 909.959034554363 102.83 0.57624 102.83 102.56 103.14 0 136 46 4 0 0 0 7.1312E-07 1 64931 97.86 80.918 1 1.3728 1.391 0 20146000 7406500 12740000 38718 1754 14578 14976 60799 60799 VQSVETVEGCTHEVALPAEEDYLPLKPR 28 1 1 Unmodified _VQSVETVEGCTHEVALPAEEDYLPLKPR_ 0 0 1 P42285;A8K6I4 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.6492 4 792.398584 3165.56523 67709.5 0.82497 0.0006537 -0.66436 -0.00052644 0.1606 0.00012726 792.648860217355 797.154654581381 110.5 0.38148 110.5 110.34 110.72 7.6294E-06 148 20 10 0 0 0 0.054918 1 62938 7.6654 7.6654 1 1.0071 0.85291 0 13797000 5936400 7860800 38719 1563 14579 14977 60800 60800 VQTEVLQK 8 1 0 Unmodified _VQTEVLQK_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 476.781 2 472.7742 943.533846 NaN NaN NaN 0.18382 8.6906E-05 NaN NaN NaN NaN 27.459 0.64947 27.459 27.256 27.905 0 0 0 0 1.1645E-20 1 12617 160.52 57.797 1 NaN NaN 0 86515000 0 86515000 38720 1316 14580 14978 60801 60801 VQTEVLQK 8 1 0 Unmodified _VQTEVLQK_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.7818 2 472.7742 943.533846 87300.25 0.30674 0.00014502 0.371 0.0001754 0.67774 0.00032042 472.774338086698 476.781356942147 27.024 0.71197 27.024 26.588 27.3 0 125 34 9 0 0 0 2.0683E-09 2 12317 161.12 58.408 1 0.96631 1.1285 0 276160000 142130000 134030000 38721 1316 14580 14978 60802;60803 60802 VQTEVLQK 8 1 0 Unmodified _VQTEVLQK_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.8923 1 944.541123 943.533846 62516.31 0.70958 0.00067023 -0.072313 -6.8302E-05 0.63727 0.00060193 944.540741713371 952.555087289352 27.025 0.26269 27.025 26.905 27.167 -1.9073E-06 52 11 6 0 0 0 0.0044453 1 12332 120.87 42.946 1 0.96629 0.99545 0 32537000 16686000 15851000 38722 1316 14580 14978 60804 60804 VQTEVLQK 8 1 0 Unmodified _VQTEVLQK_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 472.7741 2 472.7742 943.533846 87443.3 0.094463 4.466E-05 0.42297 0.00019997 0.51743 0.00024463 472.774391188872 476.781414230573 30.748 0.67928 30.748 30.505 31.184 0 167 42 6 0 0 0 0.0010071 1 12806 117.17 22.762 1 0.92404 0.71942 0 12361000 6165600 6195200 38723 1316 14580 14978 60805 60805 VQTEVLQK 8 1 0 Unmodified _VQTEVLQK_ 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 476.7814 2 472.7742 943.533846 87878.55 0.12337 5.8325E-05 0.70473 0.00033318 0.82809 0.0003915 472.774529646523 476.781510292136 30.783 0.74271 30.783 30.562 31.305 1.9073E-06 154 39 8 0 0 0 0.0075008 1 12306 82.671 15.678 1 1.0126 0.83584 0 11298000 5493800 5804700 38724 1316 14580 14978 60806 60806 VQTFPFLGR 9 0 1 Unmodified _VQTFPFLGR_ 0 0 0 M0QZR8;Q59FA0;A0A024R4F4;M0R2B7;P28340;Q308M6 M0QZR8 M0QZR8 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.7987 2 532.798009 1063.58147 NaN NaN NaN -0.71501 -0.00038095 NaN NaN NaN NaN 98.37 0.61746 98.37 98.06 98.678 7.6294E-06 0 0 0 0.014028 1 61418 63.565 44.471 1 NaN NaN 0 4962100 4962100 0 38725 155 14581 14979 60807 60807 VQTHLENPTK 10 1 0 Unmodified _VQTHLENPTK_ 0 0 0 A0A0H3W5T2;B4DNC7;A8K5K3;O75030;C9JBI8;C9J845 A0A0H3W5T2 A0A0H3W5T2 MITF Microphthalmia-associated transcription factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.8121 2 583.811845 1165.60914 79847.02 0.32895 0.00019205 0.060272 3.5188E-05 0.38923 0.00022724 583.811708147253 587.819198231976 20.598 0.37005 20.598 20.45 20.82 0 58 15 6 0 0 0 0.011959 1 7044 59.908 46.871 1 1.3603 1.3831 0 18044000 8245500 9798100 38726 536 14582 14980 60808 60808 VQTHLENPTK 10 1 0 Unmodified _VQTHLENPTK_ 0 0 0 A0A0H3W5T2;B4DNC7;A8K5K3;O75030;C9JBI8;C9J845 A0A0H3W5T2 A0A0H3W5T2 MITF Microphthalmia-associated transcription factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 392.2151 3 389.543655 1165.60914 97880.87 0.30927 0.00012047 -0.19768 -7.7004E-05 0.11159 4.347E-05 389.543584640331 392.214913332983 20.439 0.5616 20.439 20.302 20.864 0 48 17 8 0 0 0 0.013561 2 6756 37.144 37.144 1 0.89391 0.933 0 24364000 12688000 11675000 38727 536 14582 14980 60809;60810 60809 VQTHLENPTK 10 1 0 Unmodified _VQTHLENPTK_ 0 0 0 A0A0H3W5T2;B4DNC7;A8K5K3;O75030;C9JBI8;C9J845 A0A0H3W5T2 A0A0H3W5T2 MITF Microphthalmia-associated transcription factor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.8123 2 583.811845 1165.60914 NaN NaN NaN -0.68017 -0.00039709 NaN NaN NaN NaN 20.464 0.3944 20.464 20.302 20.697 0 0 0 0 0.0041226 1 6768 73.885 42.656 1 NaN NaN 0 6742100 6742100 0 38728 536 14582 14980 60811 60811 VQTHLENPTR 10 0 1 Unmodified _VQTHLENPTR_ 0 0 0 B4DIA5;A0A024QZ23;P19532 B4DIA5 B4DIA5 TFE3 Transcription factor E3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 402.2151 3 398.879038 1193.61528 94820.3 -0.04327 -1.726E-05 -0.19038 -7.5937E-05 -0.23365 -9.3196E-05 398.878956387515 402.215127944407 21.228 0.46339 21.228 21.075 21.539 0 56 21 5 0 0 0 0.025259 1 7563 23.804 21.089 1 1.5767 1.578 0 8963700 2568500 6395200 38729 9 14583 14981 60812 60812 VQTLEELEELGK 12 1 0 Unmodified _VQTLEELEELGK_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 698.3767 2 694.369389 1386.72423 73035.41 0.75537 0.00052451 0.48824 0.00033902 1.2436 0.00086352 694.871074262488 698.376644253078 97.557 0.80324 97.557 97.244 98.047 0 359 67 8 0 0 0 1.8229E-05 1 59451 104.22 104.22 1 1.1663 1.3133 0 73817000 32260000 41557000 38730 2008;393 14584 14982 60813 60813 VQTLEELEELGK 12 1 0 Unmodified _VQTLEELEELGK_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 698.3773 2 694.369389 1386.72423 72808.38 1.0481 0.00072777 -0.0094061 -6.5313E-06 1.0387 0.00072124 694.370127742381 698.376222830373 96.776 0.73755 96.776 96.537 97.275 0 371 59 8 0 0 0 4.2647E-08 2 60287 115.78 115.78 1 1.0388 1.1606 0 89184000 42504000 46680000 38731 2008;393 14584 14982 60814;60815 60814 VQTLEELEELGK 12 1 0 Unmodified _VQTLEELEELGK_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 694.3705 2 694.369389 1386.72423 72803.02 0.7105 0.00049335 -0.10199 -7.0818E-05 0.60851 0.00042253 694.369523242391 698.376288860713 110.88 1.0192 110.88 110.55 111.57 0 188 41 8 0 0 0 1.8229E-05 2 64112 104.22 104.22 1 1.5347 1.2256 0 20233000 8372500 11861000 38732 2008;393 14584 14982 60816;60817 60817 VQTLEELEELGK 12 1 0 Unmodified _VQTLEELEELGK_ 0 0 0 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6;Q08E77 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.3771 2 694.369389 1386.72423 73054.83 0.64419 0.00044731 0.060671 4.2128E-05 0.70486 0.00048943 694.369586639235 698.376437756465 110.79 0.9807 110.79 110.49 111.47 -7.6294E-06 240 47 8 0 0 0 0.00021804 2 63069 82.417 82.417 1 1.5424 1.2695 0 12172000 4862900 7309300 38733 2008;393 14584 14982 60818;60819 60818 VQTLQFHPFEAQTLISGSYDK 21 1 0 Unmodified _VQTLQFHPFEAQTLISGSYDK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.4116 3 803.741018 2408.20123 67464.34 0.81368 0.00065399 -0.54539 -0.00043835 0.26829 0.00021564 804.075062599959 806.746235375137 109.52 0.75 109.52 109.22 109.97 0 297 55 7 0 0 0 0.001365 1 68409 28.076 28.076 1 1.0271 1.1624 0 101430000 50935000 50497000 38734 339 14585 14983 60820 60820 VQTLQFHPFEAQTLISGSYDK 21 1 0 Unmodified _VQTLQFHPFEAQTLISGSYDK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.4127 3 803.741018 2408.20123 67479.98 0.75407 0.00060607 -0.68155 -0.00054779 0.072511 5.828E-05 804.075022754772 806.74617369731 108.82 0.62334 108.82 108.54 109.16 0 246 45 7 0 0 0 3.5724E-06 1 69639 48.354 48.354 1 1.0131 1.1327 0 105980000 60806000 45169000 38735 339 14585 14983 60821 60821 VQTLQFHPFEAQTLISGSYDK 21 1 0 Unmodified _VQTLQFHPFEAQTLISGSYDK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.0768 3 803.741018 2408.20123 66644.77 0.60873 0.00048926 0.28974 0.00023287 0.89847 0.00072214 804.075546302074 806.746705284332 120.05 0.65407 120.05 119.79 120.44 0 183 29 12 0 0 0 3.3049E-08 2 71170 67.136 67.136 1 1.2873 1.1024 0 73850000 32316000 41534000 38736 339 14585 14983 60822;60823 60822 VQTLQFHPFEAQTLISGSYDK 21 1 0 Unmodified _VQTLQFHPFEAQTLISGSYDK_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 804.076 3 803.741018 2408.20123 67227.07 0.68859 0.00055345 0.011073 8.8996E-06 0.69966 0.00056235 804.075348713343 806.74654998458 119.8 0.56241 119.8 119.58 120.14 0 169 23 13 0 0 0 6.3368E-12 2 70082 96.903 96.903 1 1.3968 1.1878 0 78686000 33848000 44838000 38737 339 14585 14983 60824;60825 60824 VQTSIAVCK 9 1 0 Unmodified _VQTSIAVCK_ 0 0 0 A0A024R0F1;Q9UNY4;Q59EG6 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.2805 2 503.273509 1004.53247 85823.49 0.24315 0.00012237 0.35988 0.00018112 0.60304 0.00030349 503.273452969732 507.280652016164 38.638 0.26221 38.638 38.431 38.693 0 43 16 4 0 0 0 0.041513 1 17576 41.429 24.653 1 2.0808 1.7462 0 1232600 476380 756200 38738 44 14586 14984 60826 60826 VQVALEELQDLK 12 1 0 Unmodified _VQVALEELQDLK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 696.8949 2 692.887749 1383.76095 74099.23 1.0422 0.00072213 1.4657 0.0010156 2.5079 0.0017377 692.887965222842 696.895913283726 102.08 0.69443 102.08 101.8 102.49 0 167 56 6 0 0 0 0.00021299 1 62777 89.171 89.171 1 2.3244 2.3345 0 18616000 6468000 12148000 38739 1729 14587 14985 60827 60827 VQVALEELQDLK 12 1 0 Unmodified _VQVALEELQDLK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 696.8946 2 692.887749 1383.76095 74080.55 0.81691 0.00056603 -0.10979 -7.6073E-05 0.70712 0.00048995 693.389903133185 696.894340763651 101.33 0.52225 101.33 101.09 101.61 7.6294E-06 180 41 7 0 0 0 0.00022908 1 63871 84.658 84.658 1 2.5037 2.5205 0 13482000 3728100 9754100 38740 1729 14587 14985 60828 60828 VQVEYKGETK 10 2 0 Unmodified _VQVEYKGETK_ 0 0 1 E9PN89;V9HW22;P11142;E9PKE3;Q53GZ6;Q53HF2;Q96IS6;B3KTV0;E9PLF4;B4DTX2;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;A0A024R6B5;P54652 E9PN89;V9HW22 V9HW22 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.8286 2 590.814053 1179.61355 79167.92 0.16532 9.7674E-05 0.57911 0.00034215 0.74443 0.00043982 590.814585179182 598.828437900518 21.594 0.33071 21.594 21.446 21.777 -1.9073E-06 50 12 7 0 0 0 0.053453 1 6144 54.066 50.572 1 1.1981 1.0484 0 1547300 684130 863140 38741 1467;1248 14588 14986 60829 60829 VQVPNCDEIFYAGTGNLLLR 20 0 1 Unmodified _VQVPNCDEIFYAGTGNLLLR_ 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1140.5811 2 1140.07808 2278.1416 59305.72 0.14908 0.00016996 0.4452 0.00050756 0.59427 0.00067752 1140.57992511706 1145.58479331667 121.8 0.36317 121.8 121.59 121.95 0 91 25 6 0 0 0 3.153E-06 2 80705 62.042 62.042 1 1.4424 1.4568 0 10057000 4270400 5786800 38742 1607 14589 14987 60830;60831 60831 VQVQDNEGCPVEALVK 16 1 0 Unmodified _VQVQDNEGCPVEALVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.4517 2 892.946001 1783.87745 66571.91 0.4309 0.00038477 0.061696 5.5091E-05 0.4926 0.00043987 892.946394398568 896.954541539655 81.161 0.45898 81.161 80.959 81.418 0 148 38 6 0 0 0 0.00030465 3 48272 73.435 73.435 1 1.4232 1.454 0 14301000 5562500 8738700 38743 1504 14590 14988 60832;60833;60834 60832 VQVQDNEGCPVEALVK 16 1 0 Unmodified _VQVQDNEGCPVEALVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.9559 2 892.946001 1783.87745 66580.7 0.59327 0.00052976 0.79343 0.00070849 1.3867 0.0012383 892.945840001116 896.954349083738 80.203 0.4635 80.203 79.979 80.442 0 142 36 6 0 0 0 0.00012597 4 48793 101.89 101.89 1 1.3914 1.481 0 23282000 8829000 14453000 38744 1504 14590 14988 60835;60836;60837;60838 60837 VQVQDNEGCPVEALVK 16 1 0 Unmodified _VQVQDNEGCPVEALVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.9532 2 892.946001 1783.87745 64923.28 0.4703 0.00041996 -0.071288 -6.3656E-05 0.39902 0.0003563 892.946578383861 896.953636503884 93.198 0.58208 93.198 92.955 93.537 7.6294E-06 125 36 6 0 0 0 0.00026512 1 51936 72.496 72.496 1 3.0244 2.3957 0 6311500 1643400 4668100 38745 1504 14590 14988 60839 60839 VQVQDNEGCPVEALVK 16 1 0 Unmodified _VQVQDNEGCPVEALVK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 893.4502 2 892.946001 1783.87745 64949.46 0.065936 5.8877E-05 0.73326 0.00065476 0.7992 0.00071364 893.447744283527 896.953901529722 93.088 0.59979 93.088 92.822 93.422 0 145 37 6 0 0 0 0.0019918 2 51076 54.7 54.7 1 2.8354 2.3132 0 6034100 1550000 4484100 38746 1504 14590 14988 60840;60841 60841 VQVQDVVLK 9 1 0 Unmodified _VQVQDVVLK_ 0 0 0 B3KPM8;Q8N5C6 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.3113 2 514.310949 1026.60735 NaN NaN NaN -0.77492 -0.00039855 NaN NaN NaN NaN 64.964 0.27731 64.964 64.872 65.149 0 0 0 0 0.022748 1 38298 56.729 27.256 1 NaN NaN 0 5868900 5868900 0 38747 921 14591 14989 60842 60842 VQVVDEEGDQQHQEGK 16 1 0 Unmodified _VQVVDEEGDQQHQEGK_ 0 0 0 Q86TP0;Q8WWU2;Q8WWU3;Q59FX5;H0Y6K5;H0Y7L6;B7ZLN9;Q02447 Q86TP0 Q86TP0 SP3 Transcription factor Sp3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.9512 3 608.950138 1823.82858 78314.51 0.1859 0.0001132 0.32165 0.00019587 0.50755 0.00030907 609.284391062219 611.622162792076 22.576 0.25446 22.576 22.439 22.694 0 43 10 5 0 0 0 0.0053077 1 7307 30.072 29.518 1 0.69934 0.59117 0 2014000 1041100 972890 38748 1115 14592 14990 60843 60843 VQVVGTYR 8 0 1 Unmodified _VQVVGTYR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 466.2653 2 461.261259 920.507966 89944.73 0.19163 8.8393E-05 -0.12427 -5.7322E-05 0.067361 3.1071E-05 461.261125100618 466.265258089216 35.278 0.72775 35.278 34.968 35.696 0 184 65 5 0 0 0 0.004284 2 17653 94.114 51.048 1 1.1055 1.1472 0 22580000 12418000 10161000 38749 568 14593 14991 60844;60845 60844 VQVVGTYR 8 0 1 Unmodified _VQVVGTYR_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.2626 2 461.261259 920.507966 93859.13 0.69694 0.00032147 -0.084458 -3.8957E-05 0.61249 0.00028252 461.261202511445 466.26538190874 34.379 0.42737 34.379 34.161 34.589 -3.8147E-06 107 31 5 0 0 0 0.0014375 2 17416 109.01 66.012 1 1.1013 1.2028 0 38120000 19491000 18630000 38750 568 14593 14991 60846;60847 60847 VQWFVR 6 0 1 Unmodified _VQWFVR_ 0 0 0 B7Z8H0;Q96F82;Q13415;A8K794 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 417.7347 2 417.73468 833.454808 104953.7 -0.13427 -5.609E-05 -0.17638 -7.368E-05 -0.31065 -0.00012977 417.734616886871 422.738537678529 71.317 0.22316 71.317 71.167 71.39 0 45 16 5 0 0 0 0.034893 1 42750 115.01 91.215 1 1.4992 1.4904 0 8432200 3731100 4701100 38751 1103 14594 14992 60848 60848 VQWGVFVPR 9 0 1 Unmodified _VQWGVFVPR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.3066 2 544.306001 1086.59745 80480.67 0.80418 0.00043772 0.59168 0.00032205 1.3959 0.00075977 544.305741727009 549.310175208822 99.985 1.1219 99.985 99.45 100.57 7.6294E-06 421 96 7 0 0 0 1.0206E-07 2 61360 139.31 120.58 1 0.72444 0.78998 0 51585000 30000000 21584000 38752 716 14595 14993 60849;60850 60850 VQWGVFVPR 9 0 1 Unmodified _VQWGVFVPR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.3065 2 544.306001 1086.59745 81908.6 0.5987 0.00032588 0.25164 0.00013697 0.85034 0.00046285 544.305903518708 549.310194315881 99.063 1.054 99.063 98.555 99.609 0 373 87 6 0 0 0 0.00096334 2 61886 91.9 91.9 1 0.77898 0.89392 0 52058000 28595000 23463000 38753 716 14595 14993 60851;60852 60851 VQWGVFVPR 9 0 1 Unmodified _VQWGVFVPR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.3105 2 544.306001 1086.59745 80819.86 0.90162 0.00049075 0.48187 0.00026229 1.3835 0.00075304 544.30576689332 549.31006923666 112.49 0.71904 112.49 112.17 112.89 0 186 37 8 0 0 0 0.021489 1 65214 49.442 49.442 1 1.1869 0.97962 0 11527000 5183800 6343500 38754 716 14595 14993 60853 60853 VQWGVFVPR 9 0 1 Unmodified _VQWGVFVPR_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.3107 2 544.306001 1086.59745 82274.55 0.61525 0.00033488 0.1891 0.00010293 0.80434 0.00043781 544.306041122558 549.31017081873 112.25 0.65409 112.25 111.96 112.62 7.6294E-06 159 35 6 0 0 0 0.018064 1 64176 52.403 52.403 1 1.1831 0.96201 0 9863600 4419200 5444400 38755 716 14595 14993 60854 60854 VQYEGFRPGMYVR 13 0 2 Unmodified _VQYEGFRPGMYVR_ 0 0 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.9353 3 534.601287 1600.78203 83156.14 0.43622 0.0002332 -0.13025 -6.963E-05 0.30597 0.00016357 534.601097538101 541.273390783668 80.853 0.4782 80.853 80.621 81.099 0 131 29 6 0 0 0 0.029733 1 43757 26.13 21.329 1 1.4304 1.296 0 3052000 1385000 1667000 38756 1742 14596 14994 60855 60855 VRDDVAEYK 9 1 1 Unmodified _VRDDVAEYK_ 0 0 1 Q13895;H7BY94 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.7775 2 547.77747 1093.54039 81028.45 0.34621 0.00018964 -0.025851 -1.4161E-05 0.32036 0.00017548 547.77742289341 556.788493367316 20.882 0.56251 20.882 20.627 21.19 1.9073E-06 105 25 8 0 0 0 0.00011113 2 7239 117.7 75.379 1 1.0132 1.1958 0 36520000 18203000 18317000 38757 1724 14597 14995 60856;60857 60857 VRDDVAEYK 9 1 1 Unmodified _VRDDVAEYK_ 0 0 1 Q13895;H7BY94 Q13895 Q13895 BYSL Bystin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.7887 2 547.77747 1093.54039 80893.18 0.64765 0.00035477 -0.17469 -9.5689E-05 0.47297 0.00025908 547.777584289863 556.788347707502 20.582 0.37857 20.582 20.45 20.829 1.9073E-06 64 11 9 0 0 0 0.004948 1 6824 92.538 57.094 1 0.99825 1.168 0 52060000 25298000 26762000 38758 1724 14597 14995 60858 60858 VREEEIEVDSR 11 0 2 Unmodified _VREEEIEVDSR_ 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.8389 2 680.838788 1359.66302 75877.88 0.87307 0.00059442 0.079297 5.3988E-05 0.95237 0.00064841 680.838504275327 690.846909789861 28.12 0.27247 28.12 27.99 28.262 0 88 20 6 0 0 0 0.0025453 1 13197 75.819 49.436 1 1.5938 1.7286 0 26855000 7886700 18968000 38759 468 14598 14996 60859 60859 VREELIDK 8 1 1 Unmodified _VREELIDK_ 0 0 1 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.296 2 501.284931 1000.55531 83721.55 0.55523 0.00027833 0.50594 0.00025362 1.0612 0.00053195 501.28521565208 510.296263692049 25.079 0.40469 25.079 24.831 25.236 0 54 12 6 0 0 0 0.018743 1 10705 96.668 35.986 1 1.9482 2.3238 0 50465000 17419000 33046000 38760 1561 14599 14997 60860 60860 VREEVPLELVEAHVK 15 1 1 Unmodified _VREEVPLELVEAHVK_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.9974 3 582.996471 1745.96758 80359.7 0.70608 0.00041164 0.32906 0.00019184 1.0351 0.00060348 582.996549342526 589.004121100039 95.412 0.559 95.412 95.209 95.768 0 210 40 9 0 0 0 0.0010666 2 53437 38.889 38.889 1 1.4049 1.186 0 7802400 3264700 4537700 38761 1798 14600 14998 60861;60862 60862 VREEVPLELVEAHVK 15 1 1 Unmodified _VREEVPLELVEAHVK_ 0 0 1 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 582.8591 3 582.996471 1745.96758 79060.29 0.47892 0.00027921 0.083527 4.8696E-05 0.56245 0.0003279 582.99654748259 589.00414155767 95.107 0.46947 95.107 94.917 95.387 0 130 34 6 0 0 0 0.017563 1 52508 24.918 24.918 1 1.6689 1.4013 0 6759700 2200700 4559000 38762 1798 14600 14998 60863 60863 VRELLEQISAFDNVPR 16 0 2 Unmodified _VRELLEQISAFDNVPR_ 0 0 1 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 636.015 3 629.34253 1885.00576 76647.34 0.84566 0.00053221 0.058886 3.706E-05 0.90455 0.00056927 629.676861356813 636.014618106282 115.79 0.67065 115.79 115.52 116.19 -7.6294E-06 204 32 9 0 0 0 0.00012966 1 66922 56.121 52.459 1 1.2753 1.1708 0 12268000 5363000 6904800 38763 2079 14601 14999 60864 60864 VREQSVQEIPVSR 13 0 2 Unmodified _VREQSVQEIPVSR_ 0 0 1 CON__P06868 CON__P06868 CON__P06868 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.6138 3 509.614361 1525.82125 NaN NaN NaN -1.1382 -0.00058003 NaN NaN NaN NaN 37.854 0.3263 37.854 37.707 38.034 0 0 0 0 0.023847 1 19323 45.825 27.393 1 NaN NaN 0 7307200 7307200 0 + 38764 1157 14602 15000 60865 60865 VREYELR 7 0 2 Unmodified _VREYELR_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 482.7639 2 482.764166 963.513779 85002.44 0.24644 0.00011897 -0.18512 -8.9371E-05 0.061318 2.9602E-05 482.764083329272 492.772265926305 23.841 0.84183 23.841 23.666 24.508 0 183 38 9 0 0 0 6.0562E-06 1 9626 155 83.047 1 0.97433 1.0665 0 441970000 213280000 228700000 38765 1652 14603 15001 60866 60866 VREYELR 7 0 2 Unmodified _VREYELR_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 328.8511 3 322.178536 963.513779 103453.9 0.21814 7.0279E-05 -0.20275 -6.5321E-05 0.01539 4.9582E-06 322.178432402401 328.850588684165 23.863 0.78275 23.863 23.666 24.449 0 139 36 8 0 0 0 0.0074764 2 9645 94.302 36.754 1 1.0216 1.1141 0 131280000 64831000 66447000 38766 1652 14603 15001 60867;60868 60867 VREYELR 7 0 2 Unmodified _VREYELR_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 482.7642 2 482.764166 963.513779 85929.45 -0.00074462 -3.5948E-07 0.027869 1.3454E-05 0.027124 1.3095E-05 482.76421810287 492.772384172188 23.198 0.80083 23.198 23.017 23.818 0 127 34 7 0 0 0 7.0047E-06 1 9047 153.71 81.762 1 0.97196 1.1723 0 368540000 180720000 187820000 38767 1652 14603 15001 60869 60869 VREYELR 7 0 2 Unmodified _VREYELR_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 322.1784 3 322.178536 963.513779 103579.1 -0.076567 -2.4668E-05 -0.0025277 -8.1437E-07 -0.079095 -2.5483E-05 322.178472888689 328.85067798243 23.199 0.57849 23.199 23.017 23.595 0 126 25 8 0 0 0 0.0047141 2 9050 116.25 40.94 1 1.0009 1.1775 0 139690000 67791000 71901000 38768 1652 14603 15001 60870;60871 60871 VREYELR 7 0 2 Unmodified _VREYELR_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 328.8507 3 322.178536 963.513779 103811.1 -0.26954 -8.6841E-05 0.089741 2.8913E-05 -0.1798 -5.7929E-05 322.178518336109 328.850680776206 25.849 0.6282 25.849 25.635 26.263 1.9073E-06 118 25 8 0 0 0 0.028055 2 9575 48.787 30.005 1 1.0164 0.84864 0 15585000 7007900 8576800 38769 1652 14603 15001 60872;60873 60872 VREYELR 7 0 2 Unmodified _VREYELR_ 0 0 1 Q08ES8;Q5VVD0;P62913;Q5VVC8;Q5VVC9 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 322.1784 3 322.178536 963.513779 104563.6 -0.10011 -3.2253E-05 -0.076863 -2.4764E-05 -0.17697 -5.7017E-05 322.178467368736 328.85061946087 25.745 0.52072 25.745 25.581 26.102 0 93 20 7 0 0 0 0.054168 1 9030 37.974 23.31 1 1.0772 0.98941 0 12658000 5949000 6709200 38770 1652 14603 15001 60874 60874 VRIEAENEK 9 1 1 Unmodified _VRIEAENEK_ 0 0 1 X5DQX7;Q06787;W5ZQ92;R9WQY1;A8MQB8;G3V0J0;X5D907;Q59GC1;R9WNI0;R9WPL0;A0A087WXI3 X5DQX7 X5DQX7 FMR1 Fragile X mental retardation protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.3015 2 544.290745 1086.56694 78198.02 0.51955 0.00028279 3.8042 0.0020706 4.3237 0.0023534 544.795091094798 553.806368258456 18.461 0.27625 18.461 18.296 18.572 0 35 10 7 0 0 0 0.0028279 1 5393 98.044 46.19 1 1.3615 1.6127 0 40752000 17362000 23390000 38771 1689 14604 15002 60875 60875 VRPASSAASVYAGAGGSGSR 20 0 2 Unmodified _VRPASSAASVYAGAGGSGSR_ 0 0 1 CON__P05784 CON__P05784 CON__P05784 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.6411 3 603.306367 1806.89727 NaN NaN NaN -0.27029 -0.00016307 NaN NaN NaN NaN 31.891 0.99023 31.891 31.43 32.42 -1.9073E-06 0 0 0 4.7976E-10 2 15534 72.09 61.476 1 NaN NaN 0 145900000 145900000 0 + 38772 1155 14605 15003 60876;60877 60877 VRPCVVYGGADIGQQIR 17 0 2 Unmodified _VRPCVVYGGADIGQQIR_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.6729 3 630.00011 1886.9785 76794.56 0.565 0.00035595 0.32015 0.00020169 0.88515 0.00055764 630.000794271765 636.672498487776 71.132 0.9184 71.132 70.624 71.542 0 373 75 8 0 0 0 2.0638E-18 3 41356 131.4 131.4 1 1.5789 1.7146 0 31592000 13533000 18059000 38773 522 14606 15004 60878;60879;60880 60878 VRPCVVYGGADIGQQIR 17 0 2 Unmodified _VRPCVVYGGADIGQQIR_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.335 3 630.00011 1886.9785 74890.34 0.44737 0.00028184 -0.064426 -4.0588E-05 0.38295 0.00024126 630.335056342548 636.67233996773 80.965 0.64949 80.965 80.713 81.363 0 228 40 9 0 0 0 1.6972E-05 3 43797 80.361 80.361 1 1.1331 0.96215 0 8149300 3781200 4368100 38774 522 14606 15004 60881;60882;60883 60882 VRPCVVYGGADIGQQIR 17 0 2 Unmodified _VRPCVVYGGADIGQQIR_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.3344 3 630.00011 1886.9785 75963.94 0.69352 0.00043692 -0.3836 -0.00024167 0.30993 0.00019525 630.334645656753 636.672173245974 81.014 0.50027 81.014 80.803 81.303 0 205 33 9 0 0 0 0.000805 1 42974 38.696 34.17 1 1.162 1.0563 0 6408300 2828100 3580200 38775 522 14606 15004 60884 60884 VRPDEIMR 8 0 2 Oxidation (M) _VRPDEIM(ox)R_ VRPDEIM(1)R VRPDEIM(45.68)R 0 1 1 E9PKP7;B4DNQ1;Q05BZ1 E9PKP7 E9PKP7 UBTF MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.277 2 516.268758 1030.52296 87296.66 0.3923 0.00020253 0.37839 0.00019535 0.7707 0.00039789 516.269048377641 526.277478304709 19.544 0.5018 19.544 19.357 19.859 -1.9073E-06 109 35 4 0 0 0 0.03791 1 6117 45.68 35.266 1 0.59112 0.65308 0 11257000 7837200 3420000 38776 1244 14607 15005 60885 60885 954 VRPLLPSELER 11 0 2 Unmodified _VRPLLPSELER_ 0 0 1 O95235;D6RBN1;D6R9E4 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.9258 3 436.925988 1307.75613 90372.51 0.042546 1.8589E-05 0.013229 5.7802E-06 0.055775 2.4369E-05 436.925961791646 443.598129062031 67.837 0.88307 67.837 67.449 68.333 0 346 73 7 0 0 0 0.00017992 2 40217 68.536 68.536 1 0.69808 0.8036 0 59771000 30425000 29346000 38777 1421 14608 15006 60886;60887 60887 VRPLLPSELER 11 0 2 Unmodified _VRPLLPSELER_ 0 0 1 O95235;D6RBN1;D6R9E4 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 443.598 3 436.925988 1307.75613 88203 -0.075908 -3.3166E-05 0.090629 3.9598E-05 0.014721 6.4321E-06 436.925976418586 443.598187669405 79.106 0.91753 79.106 78.799 79.717 0 268 54 9 0 0 0 0.047483 1 42579 27.431 27.431 1 1.16 0.96139 0 20738000 8718400 12020000 38778 1421 14608 15006 60888 60888 VRPVLPGEPTPPPGLLLFPSGPGGPSDPPTR 31 0 2 Unmodified _VRPVLPGEPTPPPGLLLFPSGPGGPSDPPTR_ 0 0 1 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1035.2361 3 1034.56426 3100.67096 60694.62 0.63989 0.000662 -0.087933 -9.0972E-05 0.55195 0.00057103 1035.23327743549 1041.9053204279 120.92 0.76621 120.92 120.67 121.43 0 213 52 8 0 0 0 0.014064 2 78149 20.592 20.592 1 0.69981 0.75543 0 18336000 9453600 8882500 38779 371 14609 15007 60889;60890 60890 VRPVLPGEPTPPPGLLLFPSGPGGPSDPPTR 31 0 2 Unmodified _VRPVLPGEPTPPPGLLLFPSGPGGPSDPPTR_ 0 0 1 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1035.2329 3 1034.56426 3100.67096 60738.71 0.76203 0.00078837 -0.16421 -0.00016988 0.59783 0.00061849 1034.89840084994 1041.57156073738 120.36 0.74151 120.36 120.09 120.84 7.6294E-06 243 53 9 0 0 0 0.00029381 3 79408 30.104 30.104 1 0.67521 0.70907 0 13931000 8137100 5794200 38780 371 14609 15007 60891;60892;60893 60891 VRPVLPGEPTPPPGLLLFPSGPGGPSDPPTR 31 0 2 Unmodified _VRPVLPGEPTPPPGLLLFPSGPGGPSDPPTR_ 0 0 1 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1041.5697 3 1034.56426 3100.67096 60191.44 0.88056 0.000911 -0.44476 -0.00046013 0.43581 0.00045087 1035.23286369806 1041.57055374404 132.92 0.38815 132.92 132.69 133.08 0 94 18 7 0 0 0 0.00032514 1 80816 29.377 29.377 1 1.2706 1.0782 0 8367400 3206300 5161100 38781 371 14609 15007 60894 60894 VRPVLPGEPTPPPGLLLFPSGPGGPSDPPTR 31 0 2 Unmodified _VRPVLPGEPTPPPGLLLFPSGPGGPSDPPTR_ 0 0 1 A0A024RCS7;Q9BW19;B4DMA8;B4E063 A0A024RCS7 A0A024RCS7 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1041.5708 3 1034.56426 3100.67096 60244.2 0.96773 0.0010012 -0.66682 -0.00068987 0.30091 0.00031131 1034.89804899711 1041.57006458221 132.61 0.42719 132.61 132.38 132.81 0 89 17 7 0 0 0 0.00010809 1 79713 34.414 34.414 1 1.1477 1.0558 0 13942000 6102000 7840100 38782 371 14609 15007 60895 60895 VRRPAGVR 8 0 3 Unmodified _VRRPAGVR_ 0 0 2 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 304.1943 3 304.194632 909.562067 105485.3 -0.65213 -0.00019837 0.6555 0.0001994 0.0033694 1.025E-06 304.194779600662 314.203000629322 14.887 0.25247 14.887 14.76 15.013 0 32 7 6 0 0 0 0.041329 1 2707 46.426 22.454 1 0.93306 1.0193 0 6587200 3518700 3068400 38783 1898 14610 15008 60896 60896 VRTDITYPAGFMDVISIDK 19 1 1 Oxidation (M) _VRTDITYPAGFM(ox)DVISIDK_ VRTDITYPAGFM(1)DVISIDK VRTDITYPAGFM(60.03)DVISIDK 0 1 1 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.0364 3 719.701395 2156.08236 71180.36 0.81573 0.00058709 -0.252 -0.00018137 0.56373 0.00040572 720.035796837571 725.709061487503 117.53 0.36951 117.53 117.35 117.72 7.6294E-06 112 16 10 0 0 0 5.8166E-06 1 69281 60.032 60.032 1 0.74797 0.6314 0 7792500 4201600 3590800 38784 824 14611 15009 60897 60897 654 VRTDITYPAGFMDVISIDK 19 1 1 Unmodified _VRTDITYPAGFMDVISIDK_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.365 3 714.369757 2140.08744 71841.9 1.0724 0.00076608 -0.2434 -0.00017388 0.82899 0.00059221 714.703872710157 720.377280610105 128.79 0.43715 128.79 128.58 129.01 0 130 19 10 0 0 0 1.8331E-05 3 77751 50.858 50.858 1 1.1442 0.95784 0 6650100 3104300 3545800 38785 824 14611 15010 60898;60899;60900 60899 VRTDITYPAGFMDVISIDK 19 1 1 Unmodified _VRTDITYPAGFMDVISIDK_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1 B2R491 B2R491 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.378 3 714.369757 2140.08744 70602.01 0.92542 0.00066109 -0.17488 -0.00012493 0.75054 0.00053616 714.704164394789 720.377293874908 128.58 0.59201 128.58 128.32 128.92 0 126 23 9 0 0 0 1.7776E-05 2 76712 51.526 51.526 1 1.2077 1.0132 0 5095500 2163700 2931800 38786 824 14611 15010 60901;60902 60901 VRVELSNGEK 10 1 1 Unmodified _VRVELSNGEK_ 0 0 1 B2R6F3;P84103 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.8231 2 565.811845 1129.60914 79412.24 0.77558 0.00043883 0.04016 2.2723E-05 0.81574 0.00046156 565.811830419334 574.823021884499 24.398 0.37427 24.398 24.164 24.538 1.9073E-06 89 14 9 0 0 0 3.2109E-11 2 10147 143.5 108.15 1 1.9813 2.3855 0 101000000 40248000 60750000 38787 841 14612 15011 60903;60904 60903 VRVELSNGEK 10 1 1 Unmodified _VRVELSNGEK_ 0 0 1 B2R6F3;P84103 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 377.5436 3 377.543655 1129.60914 98679.95 0.14255 5.382E-05 0.18695 7.058E-05 0.3295 0.0001244 377.543638399356 383.551163272193 24.409 0.32242 24.409 24.216 24.538 1.9073E-06 44 11 6 0 0 0 0.026377 1 10198 25.964 18.702 1 1.0521 1.2071 0 26630000 10597000 16034000 38788 841 14612 15011 60905 60905 VRVELSNGEK 10 1 1 Unmodified _VRVELSNGEK_ 0 0 1 B2R6F3;P84103 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8121 2 565.811845 1129.60914 80166.34 0.034534 1.954E-05 0.14174 8.02E-05 0.17628 9.974E-05 565.811904758997 574.823091497773 23.859 0.47512 23.859 23.701 24.176 0 67 18 6 0 0 0 1.0273E-39 2 9657 196.07 135.59 1 1.2779 1.507 0 111070000 47150000 63922000 38789 841 14612 15011 60906;60907 60907 VRVELSNGEK 10 1 1 Unmodified _VRVELSNGEK_ 0 0 1 B2R6F3;P84103 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 377.5436 3 377.543655 1129.60914 98084.44 -0.4427 -0.00016714 0.079318 2.9946E-05 -0.36338 -0.00013719 377.54368151873 383.551157981837 23.859 0.26147 23.859 23.725 23.987 0 45 9 6 0 0 0 0.0002363 2 9668 73.499 64.495 1 1.1112 1.2859 0 33028000 15340000 17688000 38790 841 14612 15011 60908;60909 60908 VRVELSNGEK 10 1 1 Unmodified _VRVELSNGEK_ 0 0 1 B2R6F3;P84103 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 565.812 2 565.811845 1129.60914 79737.33 0.43751 0.00024755 0.091563 5.1808E-05 0.52907 0.00029936 565.811752429194 574.82320397502 26.585 0.38518 26.585 26.377 26.762 1.9073E-06 79 16 7 0 0 0 0.0021498 1 10076 87.568 55.248 1 0.58891 0.49487 0 7087400 4486600 2600700 38791 841 14612 15011 60910 60910 VRVELSNGEK 10 1 1 Unmodified _VRVELSNGEK_ 0 0 1 B2R6F3;P84103 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.812 2 565.811845 1129.60914 80230.11 0.32753 0.00018532 -0.0061303 -3.4686E-06 0.3214 0.00018185 565.811775694176 574.823072733084 26.44 0.45562 26.44 26.217 26.672 0 86 20 7 0 0 0 0.060666 1 9448 52.247 21.173 1 0.59643 0.49943 0 5648400 3387800 2260700 38792 841 14612 15011 60911 60911 VRVELSTGMPR 11 0 2 Oxidation (M) _VRVELSTGM(ox)PR_ VRVELSTGM(1)PR VRVELSTGM(65.18)PR 0 1 1 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 420.8959 3 420.895812 1259.66561 90762.41 0.16911 7.1176E-05 -0.51143 -0.00021526 -0.34232 -0.00014408 420.895309059884 427.568024955376 34.216 0.57124 34.216 33.992 34.563 0 143 41 6 0 0 0 0.0004368 2 17253 65.179 65.179 1 1.8682 2.1529 0 62294000 23304000 38990000 38793 1772;1918 14613 15012 60912;60913 60912 1644 VSALDLAVLDQVEAR 15 0 1 Unmodified _VSALDLAVLDQVEAR_ 0 0 0 A8K8J9;F8W1I6;B3KTX4;V9HW58;Q53H88;Q13561;H0YHL1 A8K8J9 A8K8J9 DCTN2;HEL-S-77 Dynactin subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.946 2 799.941044 1597.86754 70714.64 0.78954 0.00063158 -0.23394 -0.00018714 0.55559 0.00044444 799.940867347581 804.94489657201 117.83 0.34866 117.83 117.67 118.02 0 60 20 4 0 0 0 0.00021588 1 75509 75.479 60.213 1 1.1447 1.1857 0 5891500 2386100 3505400 38794 777 14614 15013 60914 60914 VSALDLAVLDQVEAR 15 0 1 Unmodified _VSALDLAVLDQVEAR_ 0 0 0 A8K8J9;F8W1I6;B3KTX4;V9HW58;Q53H88;Q13561;H0YHL1 A8K8J9 A8K8J9 DCTN2;HEL-S-77 Dynactin subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.9476 2 799.941044 1597.86754 75167.58 0.65723 0.00052575 0.020871 1.6696E-05 0.6781 0.00054244 799.940385925966 804.946053624309 117.35 0.4331 117.35 117.16 117.6 0 62 25 4 0 0 0 0.00022303 1 76956 68.44 68.44 1 1.4629 1.4757 0 6083400 2831300 3252000 38795 777 14614 15013 60915 60915 VSALDLAVLDQVEAR 15 0 1 Unmodified _VSALDLAVLDQVEAR_ 0 0 0 A8K8J9;F8W1I6;B3KTX4;V9HW58;Q53H88;Q13561;H0YHL1 A8K8J9 A8K8J9 DCTN2;HEL-S-77 Dynactin subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 805.4468 2 799.941044 1597.86754 67762.66 0.69964 0.00055967 -0.61604 -0.0004928 0.083597 6.6872E-05 799.940093233972 804.945173907321 129.85 0.8681 129.85 129.46 130.33 0 103 34 5 0 0 0 0.0014541 2 78577 47.712 39.58 1 1.0148 0.865 0 2811100 1367800 1443400 38796 777 14614 15013 60916;60917 60916 VSANSVYGFTGAQVGK 16 1 0 Unmodified _VSANSVYGFTGAQVGK_ 0 0 0 M0QZR8;Q59FA0;A0A024R4F4;M0R2B7;P28340;Q308M6 M0QZR8 M0QZR8 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.9054 2 792.904462 1583.79437 NaN NaN NaN -1.9633 -0.0015567 NaN NaN NaN NaN 75.308 0.52293 75.308 75.012 75.535 0 0 0 0 0.032436 1 44199 38.58 31.891 1 NaN NaN 0 4834400 4834400 0 38797 155 14615 15014 60918 60918 VSAPEVSVGHK 11 1 0 Unmodified _VSAPEVSVGHK_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 373.2079 3 370.536501 1108.58767 99585 0.15141 5.6102E-05 -0.39118 -0.00014495 -0.23977 -8.8845E-05 370.536350258424 373.207826477501 28.092 0.28095 28.092 27.922 28.203 0 65 15 6 0 0 0 0.028237 1 13246 28.624 21.965 1 2.0429 2.1347 0 34321000 12524000 21797000 38798 1696 14616 15015 60919 60919 VSASPLLYTLIEK 13 1 0 Unmodified _VSASPLLYTLIEK_ 0 0 0 A8K6Q8;P02786;G3V0E5;B7Z2I6 A8K6Q8 A8K6Q8 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.8918 2 717.416143 1432.81773 74395.33 0.77061 0.00055285 0.1188 8.5226E-05 0.8894 0.00063807 717.416348714588 721.423206925872 117.1 0.45028 117.1 116.85 117.3 7.6294E-06 97 26 5 0 0 0 0.0032733 1 76726 66.056 66.056 1 0.75365 0.77918 0 11403000 5934000 5468800 38799 761 14617 15016 60920 60920 VSASPLLYTLIEK 13 1 0 Unmodified _VSASPLLYTLIEK_ 0 0 0 A8K6Q8;P02786;G3V0E5;B7Z2I6 A8K6Q8 A8K6Q8 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.4178 2 717.416143 1432.81773 73573.48 0.78586 0.00056379 0.2069 0.00014843 0.99275 0.00071222 717.416373724797 721.423212607031 129.93 0.41426 129.93 129.72 130.13 -1.5259E-05 71 19 5 0 0 0 0.0076324 1 78640 44.847 44.847 1 0.35121 0.29496 0 1890700 1292900 597760 38800 761 14617 15016 60921 60921 VSASPLLYTLIEK 13 1 0 Unmodified _VSASPLLYTLIEK_ 0 0 0 A8K6Q8;P02786;G3V0E5;B7Z2I6 A8K6Q8 A8K6Q8 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.4173 2 717.416143 1432.81773 73088.7 1.0583 0.00075924 0.3965 0.00028445 1.4548 0.0010437 717.41650762573 721.422953705267 129.76 0.39844 129.76 129.52 129.91 0 43 14 4 0 0 0 0.003053 1 77607 51.252 51.252 1 0.37294 0.29188 0 2083100 1415000 668140 38801 761 14617 15016 60922 60922 VSASSPSLAVASQSDSK 17 1 0 Unmodified _VSASSPSLAVASQSDSK_ 0 0 0 D6RDA9;Q3MSN4;Q3MSN1;F5ATB8;E5KQF5;H6V745;F1D8N4;B6ZGU6;E5KQF6;P04150;H6V744 D6RDA9 D6RDA9 NR3C1 Glucocorticoid receptor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 814.9141 2 810.907399 1619.80024 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.946 1 45.946 45.446 46.446 0 0 0 0 0.0041262 1 25278 52.265 38.302 1 38802 1083 14618 15017 60923 60923 VSASSPSLAVASQSDSK 17 1 0 Unmodified _VSASSPSLAVASQSDSK_ 0 0 0 D6RDA9;Q3MSN4;Q3MSN1;F5ATB8;E5KQF5;H6V745;F1D8N4;B6ZGU6;E5KQF6;P04150;H6V744 D6RDA9 D6RDA9 NR3C1 Glucocorticoid receptor MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.9077 2 810.907399 1619.80024 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.962 1 45.962 45.462 46.462 -3.8147E-06 0 0 0 0.00057527 1 25288 57.804 42.928 1 38803 1083 14618 15017 60924 60924 VSAWELINSEYFSEGR 16 0 1 Unmodified _VSAWELINSEYFSEGR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 949.4554 2 943.949598 1885.88464 64571.13 0.93282 0.00088054 -0.47195 -0.00044549 0.46088 0.00043504 944.450528620992 949.45388093292 119.38 0.40006 119.38 119.19 119.59 0 84 26 5 0 0 0 0.00029814 1 76761 55.314 47.009 1 1.8034 1.7968 0 8122900 2909500 5213300 38804 397;1622 14619 15018 60925 60925 VSAWELINSEYFSEGR 16 0 1 Unmodified _VSAWELINSEYFSEGR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 949.4068 2 943.949598 1885.88464 65355.78 0.61948 0.00058476 -0.044992 -4.247E-05 0.57449 0.00054229 944.449534052844 948.954874851061 118.86 0.4137 118.86 118.66 119.07 0 90 25 5 0 0 0 0.0030895 1 78245 56.295 47.885 1 1.7122 1.7294 0 10076000 3092500 6983000 38805 397;1622 14619 15018 60926 60926 VSCAHIYSALDPTAR 15 0 1 Unmodified _VSCAHIYSALDPTAR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 557.6115 3 554.27524 1659.80389 83541.33 0.30978 0.0001717 -0.18663 -0.00010344 0.12316 6.8263E-05 554.2750546924 557.611668788996 65.211 0.67577 65.211 64.801 65.477 0 244 60 7 0 0 0 0.0014712 2 37484 38.261 33.869 1 0.82872 0.8404 0 15129000 6917700 8211600 38806 1933 14620 15019 60927;60928 60927 VSCAHIYSALDPTAR 15 0 1 Unmodified _VSCAHIYSALDPTAR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.6126 3 554.27524 1659.80389 81932.13 0.41375 0.00022933 -0.18912 -0.00010482 0.22463 0.0001245 554.275177724913 557.611568111989 63.115 0.58832 63.115 62.835 63.423 0 246 48 8 0 0 0 9.1628E-05 3 37048 60.489 54.052 1 0.88536 0.88697 0 17195000 8749100 8446200 38807 1933 14620 15019 60929;60930;60931 60929 VSCAHIYSALDPTAR 15 0 1 Unmodified _VSCAHIYSALDPTAR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 557.612 3 554.27524 1659.80389 81289.44 0.50032 0.00027731 -0.29723 -0.00016475 0.20308 0.00011256 554.274978573843 557.611386442602 74.121 0.69418 74.121 73.827 74.522 0 236 45 8 0 0 0 0.046136 2 39175 17.252 12.622 1 1.3343 1.1281 0 4893600 2103500 2790100 38808 1933 14620 15019 60932;60933 60932 VSCAHIYSALDPTAR 15 0 1 Unmodified _VSCAHIYSALDPTAR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.9468 3 554.27524 1659.80389 81385.23 0.49426 0.00027396 -0.26238 -0.00014543 0.23188 0.00012853 554.275132030242 557.611318955172 74.369 0.58814 74.369 74.104 74.692 0 206 38 8 0 0 0 0.045993 1 38555 17.281 17.281 1 1.2498 1.1053 0 4010300 1842100 2168200 38809 1933 14620 15019 60934 60934 VSDEYEQLSSEALEAAR 17 0 1 Unmodified _VSDEYEQLSSEALEAAR_ 0 0 0 F8W7C6 F8W7C6 F8W7C6 RPL10 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 954.45 2 948.944709 1895.87487 NaN NaN NaN 0.064956 6.164E-05 NaN NaN NaN NaN 110.08 0.37035 110.08 109.88 110.25 0 0 0 0 0.0090566 1 62595 44.511 29.824 1 NaN NaN 0 1120500 0 1120500 38810 1266 14621 15020 60935 60935 VSDSISAQYPVVDHEFDAVVVGAGGAGLR 29 0 1 Unmodified _VSDSISAQYPVVDHEFDAVVVGAGGAGLR_ 0 0 0 D6RFM5;A0A024QZ30;B4DYN5;P31040;A0A087X1I3 D6RFM5 D6RFM5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 976.1607 3 972.48931 2914.4461 64309.48 0.18957 0.00018435 -0.15855 -0.00015419 0.031016 3.0163E-05 973.157289660619 975.825033129832 114.62 0.35787 114.62 114.42 114.78 0 70 24 7 0 0 0 0.032018 1 72834 13.164 13.164 1 0.52966 0.53991 0 6876000 4570900 2305100 38811 10 14622 15021 60936 60936 VSDVEELTPPEHLSDLPPFSR 21 0 1 Unmodified _VSDVEELTPPEHLSDLPPFSR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 792.3992 3 788.728778 2363.16451 68692.86 1.0552 0.00083224 0.24117 0.00019021 1.2963 0.0010225 789.063282419775 792.399381818142 108.72 0.70198 108.72 108.47 109.17 7.6294E-06 351 46 11 0 0 0 2.7219E-12 3 67862 98.703 98.703 1 0.94269 1.0506 0 83428000 42745000 40683000 38812 1887 14623 15022 60937;60938;60939 60938 VSDVEELTPPEHLSDLPPFSR 21 0 1 Unmodified _VSDVEELTPPEHLSDLPPFSR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.0635 3 788.728778 2363.16451 68930.07 0.75591 0.00059621 0.08846 6.9771E-05 0.84437 0.00066598 789.063073025614 792.399331713964 108.25 0.71423 108.25 107.89 108.6 0 370 49 10 0 0 0 5.0538E-22 2 69074 116.21 116.21 1 0.94753 1.0885 0 78077000 41927000 36150000 38813 1887 14623 15022 60940;60941 60941 VSDVEELTPPEHLSDLPPFSR 21 0 1 Unmodified _VSDVEELTPPEHLSDLPPFSR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 792.4006 3 788.728778 2363.16451 68152.92 0.9444 0.00074487 0.16735 0.00013199 1.1117 0.00087686 789.063311375489 792.399165175986 119.43 0.76582 119.43 119.11 119.87 -7.6294E-06 219 34 10 0 0 0 1.0487E-11 2 70635 94.837 94.837 1 1.7494 1.4629 0 24208000 9745600 14462000 38814 1887 14623 15022 60942;60943 60943 VSDVEELTPPEHLSDLPPFSR 21 0 1 Unmodified _VSDVEELTPPEHLSDLPPFSR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5;B4DHE5;B4DXB7 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.3982 3 788.728778 2363.16451 68891.3 0.76212 0.00060111 -0.18722 -0.00014766 0.5749 0.00045344 789.06294119742 792.399042994096 119.24 0.84203 119.24 118.86 119.7 -7.6294E-06 226 36 10 0 0 0 4.4531E-08 2 69556 63.454 63.454 1 1.7787 1.5516 0 28761000 9132600 19629000 38815 1887 14623 15022 60944;60945 60944 VSDVIWNSLSR 11 0 1 Unmodified _VSDVIWNSLSR_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;E7ENS2;E7EPR4;E7ET29;Q7Z5Y5;Q9GZQ5;C9DZM4 A0A024R570 A0A024R570 MEN1 Menin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3367 2 638.338227 1274.6619 NaN NaN NaN -1.3122 -0.00083762 NaN NaN NaN NaN 89.484 0.17729 89.484 89.418 89.595 0 0 0 0 0.012188 1 55270 56.359 29.244 1 NaN NaN 0 6383800 6383800 0 38816 171 14624 15023 60946 60946 VSEFNVSSEGSGEK 14 1 0 Unmodified _VSEFNVSSEGSGEK_ 0 0 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.3338 2 728.333535 1454.65252 70859.58 0.94614 0.00068911 -0.030667 -2.2336E-05 0.91547 0.00066677 728.333649859863 732.340512210773 38.835 0.56971 38.835 38.556 39.126 0 316 46 9 0 0 0 6.0237E-47 2 19909 185.25 172.67 1 1.0832 1.2206 0 126670000 63197000 63478000 38817 2008 14625 15024 60947;60948 60948 VSEFNVSSEGSGEK 14 1 0 Unmodified _VSEFNVSSEGSGEK_ 0 0 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 728.3354 2 728.333535 1454.65252 70850.73 0.46527 0.00033887 0.021593 1.5727E-05 0.48686 0.0003546 728.33363950177 732.340607952779 37.841 0.44261 37.841 37.637 38.08 0 212 33 10 0 0 0 1.3095E-46 1 19678 181.49 172.53 1 1.0304 1.2 0 246300000 118070000 128230000 38818 2008 14625 15024 60949 60949 VSEFNVSSEGSGEK 14 1 0 Unmodified _VSEFNVSSEGSGEK_ 0 0 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 728.8354 2 728.333535 1454.65252 71033.27 0.65935 0.00048022 -0.10923 -7.9553E-05 0.55012 0.00040067 728.333750956704 732.340474017112 44.666 1.0074 44.666 44.287 45.295 0 425 74 9 0 0 0 0.00015411 1 21185 76.073 76.073 1 1.5402 1.2509 0 27738000 10548000 17190000 38819 2008 14625 15024 60950 60950 VSEFNVSSEGSGEK 14 1 0 Unmodified _VSEFNVSSEGSGEK_ 0 0 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.3412 2 728.333535 1454.65252 71847.03 0.88727 0.00064623 -0.26566 -0.00019349 0.62161 0.00045274 728.333433234925 732.340375331906 44.87 1.0306 44.87 44.307 45.338 -3.8147E-06 373 72 9 0 0 0 0.0001667 2 20997 74.077 73.917 1 1.5261 1.2425 0 25475000 10422000 15053000 38820 2008 14625 15024 60951;60952 60952 VSEGGPAEIAGLQIGDK 17 1 0 Unmodified _VSEGGPAEIAGLQIGDK_ 0 0 0 O14907 O14907 O14907 TAX1BP3 Tax1-binding protein 3 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.0906 2 820.928134 1639.84172 NaN NaN NaN -0.87635 -0.00071942 NaN NaN NaN NaN 89.606 0.11042 89.606 89.528 89.638 0 0 0 0 0.03591 1 54073 35.657 17.848 1 NaN NaN 0 3541800 3541800 0 38821 1367 14626 15025 60953 60953 VSEGGPAEIAGLQIGDK 17 1 0 Unmodified _VSEGGPAEIAGLQIGDK_ 0 0 0 O14907 O14907 O14907 TAX1BP3 Tax1-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.9373 2 820.928134 1639.84172 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.409 1 89.409 88.909 89.909 0 0 0 0 0.00058117 1 53981 57.434 46.215 1 38822 1367 14626 15025 60954 60954 VSEGGPAEIAGLQIGDK 17 1 0 Unmodified _VSEGGPAEIAGLQIGDK_ 0 0 0 O14907 O14907 O14907 TAX1BP3 Tax1-binding protein 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.9361 2 820.928134 1639.84172 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.509 1 89.509 89.009 90.009 7.6294E-06 0 0 0 0.00055888 1 54036 58.831 49.144 1 38823 1367 14626 15025 60955 60955 VSEGGPAEIAGLQIGDK 17 1 0 Unmodified _VSEGGPAEIAGLQIGDK_ 0 0 0 O14907 O14907 O14907 TAX1BP3 Tax1-binding protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.934 2 820.928134 1639.84172 NaN NaN NaN 0.043504 3.5714E-05 NaN NaN NaN NaN 88.581 0.33681 88.581 88.531 88.868 0 0 0 0 6.0745E-05 1 54635 73.466 63.158 1 NaN NaN 0 9886100 0 9886100 38824 1367 14626 15025 60956 60956 VSEGGPAEIAGLQIGDK 17 1 0 Unmodified _VSEGGPAEIAGLQIGDK_ 0 0 0 O14907 O14907 O14907 TAX1BP3 Tax1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 824.9356 2 820.928134 1639.84172 68062.22 0.70666 0.00058011 0.15851 0.00013013 0.86517 0.00071024 821.428950494198 824.935394007827 102.52 0.20973 102.52 102.43 102.64 0 29 14 4 0 0 0 0.019823 1 58154 25.448 23.036 1 1.2808 1.041 0 2698200 1112800 1585500 38825 1367 14626 15025 60957 60957 VSEIPLTR 8 0 1 Unmodified _VSEIPLTR_ 0 0 0 J3QK86;J3KPG5;F8VU39;Q9UIF9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.7684 2 457.768917 913.523281 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.337 1 51.337 50.837 51.837 3.8147E-06 0 0 0 0.029688 1 29090 63.054 41.372 1 38826 1260 14627 15026 60958 60958 VSELVQFLLIK 11 1 0 Unmodified _VSELVQFLLIK_ 0 0 0 Q96MG7 Q96MG7 Q96MG7 NDNL2 Melanoma-associated antigen G1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.9045 2 644.897389 1287.78022 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.67 1 126.67 126.17 127.17 0 0 0 0 2.0567E-05 1 82448 90.629 77.839 1 38827 1979 14628 15027 60959 60959 VSELVQFLLIK 11 1 0 Unmodified _VSELVQFLLIK_ 0 0 0 Q96MG7 Q96MG7 Q96MG7 NDNL2 Melanoma-associated antigen G1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.8984 2 644.897389 1287.78022 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.21 1 126.21 125.71 126.71 7.6294E-06 0 0 0 4.7509E-05 1 84156 100.02 77.78 1 38828 1979 14628 15027 60960 60960 VSELVQFLLIK 11 1 0 Unmodified _VSELVQFLLIK_ 0 0 0 Q96MG7 Q96MG7 Q96MG7 NDNL2 Melanoma-associated antigen G1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.9053 2 644.897389 1287.78022 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.36 1 126.36 125.86 126.86 7.6294E-06 0 0 0 0.00088442 1 84271 69.954 53.414 1 38829 1979 14628 15027 60961 60961 VSEVKPTYR 9 1 1 Unmodified _VSEVKPTYR_ 0 0 1 Q2NLD4;Q2NLC9;Q5U0P9;Q56A79;Q00577 Q2NLD4 Q2NLD4 PURA Transcriptional activator protein Pur-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.7985 2 539.798206 1077.58186 NaN NaN NaN NaN NaN NaN NaN NaN NaN 20.206 1 20.206 19.706 20.706 0 0 0 0 0.010112 1 6666 79.474 23.572 1 38830 1673 14629 15028 60962 60962 VSFELFADK 9 1 0 Unmodified _VSFELFADK_ 0 0 0 V9HWF5;A8K486;P62937;B4DM82;B2RE56;F8WE65;C9J5S7;Q71V99 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.281 2 528.274032 1054.53351 84084.72 0.62351 0.00032938 -0.10758 -5.6832E-05 0.51593 0.00027255 528.273828072854 532.28113398504 98.135 1.1385 98.135 97.762 98.901 0 402 91 6 0 0 0 0.0021437 1 59804 76.221 58.857 1 3.8543 4.3703 0 96187000 19597000 76589000 38831 731 14630 15029 60963 60963 VSFELFADK 9 1 0 Unmodified _VSFELFADK_ 0 0 0 V9HWF5;A8K486;P62937;B4DM82;B2RE56;F8WE65;C9J5S7;Q71V99 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.2813 2 528.274032 1054.53351 84450.27 0.61722 0.00032606 -0.1005 -5.309E-05 0.51672 0.00027297 528.273882659272 532.281095788093 97.457 1.1162 97.457 96.887 98.004 0 433 88 7 0 0 0 0.0019984 2 60656 78.113 50.976 1 3.857 4.3105 0 96488000 23579000 72909000 38832 731 14630 15029 60964;60965 60964 VSFELFADK 9 1 0 Unmodified _VSFELFADK_ 0 0 0 V9HWF5;A8K486;P62937;B4DM82;B2RE56;F8WE65;C9J5S7;Q71V99 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.2813 2 528.274032 1054.53351 82567.06 0.60483 0.00031952 -0.36387 -0.00019222 0.24096 0.00012729 528.273930800516 532.280896042683 110.89 0.65462 110.89 110.6 111.25 7.6294E-06 128 27 6 0 0 0 0.03167 2 64056 45.368 36.505 1 1.3673 1.0896 0 6785300 2965600 3819700 38833 731 14630 15029 60966;60967 60966 VSFELFADK 9 1 0 Unmodified _VSFELFADK_ 0 0 0 V9HWF5;A8K486;P62937;B4DM82;B2RE56;F8WE65;C9J5S7;Q71V99 V9HWF5 V9HWF5 HEL-S-69p;PPIA Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.2808 2 528.274032 1054.53351 83104.39 0.54939 0.00029023 -0.15326 -8.0962E-05 0.39613 0.00020927 528.273944268981 532.280937536351 110.72 0.61963 110.72 110.45 111.07 0 152 31 6 0 0 0 0.056815 2 62946 36.381 29.161 1 1.3761 1.1269 0 5425700 2336800 3088900 38834 731 14630 15029 60968;60969 60968 VSFGGHLRPELFDENLPPNTPLK 23 1 1 Unmodified _VSFGGHLRPELFDENLPPNTPLK_ 0 0 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.8493 4 645.091957 2576.33872 74083.91 0.77886 0.00050244 -0.16659 -0.00010746 0.61228 0.00039498 645.342742641769 649.848111664898 108.01 1.3465 108.01 107.2 108.54 0 331 102 6 0 0 0 0.032162 1 67080 12.802 12.802 1 1.1249 1.2777 0 24201000 11226000 12974000 38835 1569;1864 14631 15030 60970 60970 VSFGGHLRPELFDENLPPNTPLK 23 1 1 Unmodified _VSFGGHLRPELFDENLPPNTPLK_ 0 0 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 649.8484 4 645.091957 2576.33872 74965.94 0.99422 0.00064136 -0.69393 -0.00044765 0.30029 0.00019371 645.593340254832 649.847708011158 106.53 0.63216 106.53 106.21 106.85 -7.6294E-06 279 47 8 0 0 0 0.026888 1 67842 14.762 14.762 1 1.1701 1.3431 0 24510000 8267000 16243000 38836 1569;1864 14631 15030 60971 60971 VSFGGHLRPELFDENLPPNTPLK 23 1 1 Unmodified _VSFGGHLRPELFDENLPPNTPLK_ 0 0 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.3436 4 645.091957 2576.33872 75137.55 0.95061 0.00061323 0.22854 0.00014743 1.1791 0.00076066 645.342947971573 649.848421408524 114.61 1.3512 114.61 114.1 115.45 0 368 60 8 0 0 0 0.00054896 2 66912 31.473 31.473 1 2.3665 2.0679 0 24465000 6698800 17767000 38837 1569;1864 14631 15030 60972;60973 60972 VSFGGHLRPELFDENLPPNTPLK 23 1 1 Unmodified _VSFGGHLRPELFDENLPPNTPLK_ 0 0 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.3427 4 645.091957 2576.33872 74742.86 0.73664 0.0004752 0.15548 0.0001003 0.89211 0.0005755 645.342799254836 649.848411368987 114.28 1.4109 114.28 113.83 115.24 -7.6294E-06 335 62 8 0 0 0 0.016669 2 65879 18.56 18.56 1 2.4329 2.0669 0 26422000 7089800 19332000 38838 1569;1864 14631 15030 60974;60975 60975 VSFGVSEQQAVEAWEK 16 1 0 Unmodified _VSFGVSEQQAVEAWEK_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.9417 2 897.438866 1792.86318 64349.78 0.58849 0.00052814 0.19067 0.00017112 0.77917 0.00069925 897.439073162922 901.445582050144 99.031 0.69086 99.031 98.747 99.438 0 256 55 6 0 0 0 0.0001555 2 60532 72.705 72.705 1 0.82296 0.82885 0 27168000 13297000 13871000 38839 2139 14632 15031 60976;60977 60977 VSFGVSEQQAVEAWEK 16 1 0 Unmodified _VSFGVSEQQAVEAWEK_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 897.9412 2 897.438866 1792.86318 64363.77 0.69414 0.00062295 0.18737 0.00016816 0.88152 0.00079111 897.439061842988 901.445879775149 98.383 0.69545 98.383 98.071 98.767 0 273 59 7 0 0 0 5.5334E-07 2 61436 98.368 98.368 1 0.91717 0.9889 0 38049000 16394000 21654000 38840 2139 14632 15031 60978;60979 60978 VSFGVSEQQAVEAWEK 16 1 0 Unmodified _VSFGVSEQQAVEAWEK_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 897.9409 2 897.438866 1792.86318 64263.14 0.72219 0.00064812 0.50797 0.00045587 1.2302 0.001104 897.940681825974 901.947863294222 112.05 0.64372 112.05 111.84 112.48 0 188 38 9 0 0 0 2.3099E-06 2 64983 92.781 92.781 1 0.67521 0.5266 0 12138000 6776500 5361100 38841 2139 14632 15031 60980;60981 60980 VSFGVSEQQAVEAWEK 16 1 0 Unmodified _VSFGVSEQQAVEAWEK_ 0 0 0 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 901.4465 2 897.438866 1792.86318 63890.5 0.27559 0.00024732 0.79646 0.00071477 1.072 0.00096209 897.941073458404 901.446896198355 111.98 0.45108 111.98 111.77 112.22 0 143 23 8 0 0 0 0.00022567 2 64015 73.219 66.18 1 0.97043 0.77948 0 15406000 7532700 7873100 38842 2139 14632 15031 60982;60983 60983 VSFLLPTLR 9 0 1 Unmodified _VSFLLPTLR_ 0 0 0 A0A140VJD0;Q9UFC0;H7C5S6;Q59FT0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.3276 2 523.32386 1044.63317 85424.5 0.63267 0.00033109 -0.864 -0.00045215 -0.23134 -0.00012106 523.3236214339 528.327753612207 113.8 0.52067 113.8 113.58 114.1 0 132 37 5 0 0 0 0.0011452 2 71991 89.355 65.2 1 1.4054 1.4768 0 11590000 5082700 6507500 38843 599 14633 15032 60984;60985 60984 VSFLLPTLR 9 0 1 Unmodified _VSFLLPTLR_ 0 0 0 A0A140VJD0;Q9UFC0;H7C5S6;Q59FT0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 528.8304 2 523.32386 1044.63317 85484.35 0.45517 0.0002382 -0.79264 -0.00041481 -0.33748 -0.00017661 523.323726161811 528.327846470642 113.15 0.54526 113.15 112.9 113.44 0 144 37 6 0 0 0 0.010772 2 73202 58.981 42.778 1 1.2922 1.2681 0 13800000 5504800 8295700 38844 599 14633 15032 60986;60987 60986 VSFLLPTLR 9 0 1 Unmodified _VSFLLPTLR_ 0 0 0 A0A140VJD0;Q9UFC0;H7C5S6;Q59FT0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 528.3286 2 523.32386 1044.63317 84496.65 0.45919 0.00024031 0.14798 7.7442E-05 0.60717 0.00031775 523.323818044695 528.327983083158 125.16 0.53596 125.16 124.9 125.44 0 90 21 6 0 0 0 0.018227 2 75059 52.255 36.052 1 1.3964 1.1667 0 3340100 1414700 1925500 38845 599 14633 15032 60988;60989 60989 VSFLLPTLR 9 0 1 Unmodified _VSFLLPTLR_ 0 0 0 A0A140VJD0;Q9UFC0;H7C5S6;Q59FT0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 528.3287 2 523.32386 1044.63317 84438.85 0.54561 0.00028553 0.077373 4.0491E-05 0.62298 0.00032602 523.323795503784 528.328019152685 124.95 0.50812 124.95 124.7 125.2 0 102 23 6 0 0 0 0.013268 1 74031 56.729 45.864 1 1.3193 1.1667 0 3983800 1354700 2629100 38846 599 14633 15032 60990 60990 VSFSYAGLSGDDPDLGPAHVVTVIAR 26 0 1 Unmodified _VSFSYAGLSGDDPDLGPAHVVTVIAR_ 0 0 0 A0A024R2F9;Q9BTV4;Q8TEP9 A0A024R2F9 A0A024R2F9 TMEM43;FLJ00144 Transmembrane protein 43 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 885.456 3 881.785287 2642.33403 66167.7 0.68708 0.00060586 -0.086659 -7.6415E-05 0.60042 0.00052944 882.119805016666 885.455519318985 116.04 0.46663 116.04 115.79 116.26 0 148 26 9 0 0 0 0.00070172 1 74068 27.419 27.419 1 0.47026 0.48621 0 23515000 15279000 8235900 38847 110 14634 15033 60991 60991 VSFSYAGLSGDDPDLGPAHVVTVIAR 26 0 1 Unmodified _VSFSYAGLSGDDPDLGPAHVVTVIAR_ 0 0 0 A0A024R2F9;Q9BTV4;Q8TEP9 A0A024R2F9 A0A024R2F9 TMEM43;FLJ00144 Transmembrane protein 43 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 882.1212 3 881.785287 2642.33403 NaN NaN NaN 0.3869 0.00034116 NaN NaN NaN NaN 115.44 0.44241 115.44 115.26 115.7 -7.6294E-06 0 0 0 1.5481E-17 1 75283 81.888 75.661 1 NaN NaN 0 23881000 23881000 0 38848 110 14634 15033 60992 60992 VSGHVITDIVEGK 13 1 0 Unmodified _VSGHVITDIVEGK_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 454.5888 3 451.91727 1352.72998 89698.96 0.1981 8.9525E-05 0.36458 0.00016476 0.56268 0.00025429 451.917342171841 454.588681159015 67.601 0.88737 67.601 67.104 67.992 0 217 74 4 0 0 0 0.00010132 2 39030 48.823 48.823 1 1.849 1.8116 0 21452000 6849000 14603000 38849 1611 14635 15034 60993;60994 60993 VSGISFPTTELLR 13 0 1 Unmodified _VSGISFPTTELLR_ 0 0 0 Q9BW92 Q9BW92 Q9BW92 TARS2 Threonine--tRNA ligase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.3976 2 710.395741 1418.77693 78917.23 0.89107 0.00063301 0.29135 0.00020698 1.1824 0.00083999 710.395895619666 715.901815007355 112.99 0.44334 112.99 112.76 113.21 0 87 30 4 0 0 0 0.0094957 1 71451 42.743 32.22 1 1.3881 1.4395 0 5744700 1624500 4120200 38850 2011 14636 15035 60995 60995 VSGLEPATVDWAFDLTK 17 1 0 Unmodified _VSGLEPATVDWAFDLTK_ 0 0 0 F2YHM7;A0A024R5C6;Q86UY6;B4E0W9 F2YHM7 F2YHM7 NAA40;NAT11 N-alpha-acetyltransferase 40 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.4762 2 924.972541 1847.93053 NaN NaN NaN -0.43322 -0.00040071 NaN NaN NaN NaN 124 0.43573 124 123.8 124.24 -7.6294E-06 0 0 0 0.031497 1 82434 36.847 20.957 1 NaN NaN 0 3185200 3185200 0 38851 177 14637 15036 60996 60996 VSGNPQVHIK 10 1 0 Unmodified _VSGNPQVHIK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.8113 2 539.803823 1077.59309 83443.01 0.90682 0.0004895 -0.24918 -0.00013451 0.65764 0.00035499 539.803666570604 543.810665937316 22.328 0.40203 22.328 22.141 22.543 0 111 24 8 0 0 0 1.195E-08 1 8360 123.5 123.5 1 1.704 1.9296 0 89575000 33928000 55646000 38852 1569 14638 15037 60997 60997 VSGNPQVHIK 10 1 0 Unmodified _VSGNPQVHIK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 362.8762 3 360.204974 1077.59309 97974.8 -0.049076 -1.7677E-05 0.15126 5.4486E-05 0.10219 3.6809E-05 360.20499187827 362.876373947514 22.073 0.57071 22.073 21.89 22.46 0 109 25 8 0 0 0 0.0031173 2 8075 51.268 51.268 1 1.8382 2.0924 0 147740000 56887000 90857000 38853 1569 14638 15037 60998;60999 60998 VSGNPQVHIK 10 1 0 Unmodified _VSGNPQVHIK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 539.8037 2 539.803823 1077.59309 82223.09 0.26895 0.00014518 0.053878 2.9083E-05 0.32282 0.00017426 539.804031023205 543.811118893853 22.096 0.35123 22.096 21.89 22.241 0 69 15 6 0 0 0 0.00062386 1 8089 88.948 88.948 1 1.796 2.037 0 139320000 52066000 87254000 38854 1569 14638 15037 61000 61000 VSGNPQVHIK 10 1 0 Unmodified _VSGNPQVHIK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 543.8112 2 539.803823 1077.59309 82698.25 0.47028 0.00025386 -0.29557 -0.00015955 0.17471 9.4308E-05 539.803809089637 543.81093036427 24.189 0.59299 24.189 23.991 24.583 1.9073E-06 99 31 6 0 0 0 0.00038013 1 7955 88.177 88.177 1 4.0308 3.3293 0 11524000 1991600 9532700 38855 1569 14638 15037 61001 61001 VSGSINMLSLTQGLFR 16 0 1 Oxidation (M) _VSGSINM(ox)LSLTQGLFR_ VSGSINM(1)LSLTQGLFR VSGSINM(42.03)LSLTQGLFR 0 1 0 P82675 P82675 P82675 MRPS5 28S ribosomal protein S5, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.9666 2 869.961454 1737.90835 NaN NaN NaN 0.050478 4.3914E-05 NaN NaN NaN NaN 113.23 0.3949 113.23 113.03 113.43 7.6294E-06 0 0 0 0.0053653 1 73478 42.031 33.301 1 NaN NaN 0 3228600 0 3228600 38856 1668 14639 15038 61002 61002 1471 VSGTLDTPEK 10 1 0 Unmodified _VSGTLDTPEK_ 0 0 0 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.7792 2 523.771854 1045.52915 84430.28 0.23461 0.00012288 0.0019708 1.0323E-06 0.23658 0.00012392 523.771778538974 527.77880126222 25.769 0.62917 25.769 25.486 26.115 0 159 33 9 0 0 0 2.3261E-22 2 11252 168.26 111.71 1 1.2005 1.3528 0 126550000 62136000 64418000 38857 2019 14640 15039 61003;61004 61003 VSGTLDTPEK 10 1 0 Unmodified _VSGTLDTPEK_ 0 0 0 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.7719 2 523.771854 1045.52915 84148.8 0.82448 0.00043184 0.6707 0.00035129 1.4952 0.00078313 523.771857245291 527.779431196875 25.485 0.74277 25.485 25.038 25.781 0 149 34 9 0 0 0 1.6438E-12 2 11074 148.62 95.834 1 1.0107 1.1653 0 184510000 96036000 88470000 38858 2019 14640 15039 61005;61006 61006 VSGTLDTPEK 10 1 0 Unmodified _VSGTLDTPEK_ 0 0 0 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.7723 2 523.771854 1045.52915 82092.11 0.19866 0.00010405 0.15877 8.316E-05 0.35743 0.00018721 523.771994640037 527.778992839985 28.59 0.33248 28.59 28.397 28.729 0 85 17 7 0 0 0 0.0011777 2 11452 74.941 36.427 1 1.3951 1.1132 0 20055000 8705400 11350000 38859 2019 14640 15039 61007;61008 61008 VSGTLDTPEK 10 1 0 Unmodified _VSGTLDTPEK_ 0 0 0 Q9BYG3;C9J808;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 523.7722 2 523.771854 1045.52915 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.797 1 28.797 28.297 29.297 -1.9073E-06 0 0 0 1.2075E-05 1 11070 96.331 43.165 1 38860 2019 14640 15039 61009 61009 VSGVDGYETEGIR 13 0 1 Unmodified _VSGVDGYETEGIR_ 0 0 0 Q14566;Q4ZG57 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.3334 2 691.333338 1380.65212 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.432 1 53.432 52.932 53.932 0 0 0 0 0.00033387 1 29884 88.155 67.156 1 38861 1734 14641 15040 61010 61010 VSHELGPSLR 10 0 1 Unmodified _VSHELGPSLR_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 365.8727 3 365.536612 1093.58801 100578.7 0.6459 0.0002361 1.094 0.00039989 1.7399 0.00063599 365.536554603139 368.872670239164 29.904 0.71249 29.904 29.603 30.315 0 136 55 5 0 0 0 0.029928 1 14593 30.205 16.436 1 1.5768 1.5817 0 17568000 9346800 8221100 38862 122 14642 15041 61011 61011 VSHLLGINVTDFTR 14 0 1 Unmodified _VSHLLGINVTDFTR_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.9594 3 524.622857 1570.84674 83266.32 0.61262 0.00032139 -0.067413 -3.5366E-05 0.54521 0.00028603 524.622796641021 527.958891163801 100.97 1.5075 100.97 100.39 101.89 0 485 113 6 0 0 0 2.6234E-05 4 62347 78.985 78.985 1 1.6418 1.8772 0 126850000 45856000 80998000 38863 81 14643 15042 61012;61013;61014;61015 61015 VSHLLGINVTDFTR 14 0 1 Unmodified _VSHLLGINVTDFTR_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.6232 3 524.622857 1570.84674 82938.47 0.48061 0.00025214 0.044458 2.3324E-05 0.52506 0.00027546 524.622877521118 527.958914182463 99.581 1.2987 99.581 98.989 100.29 0 632 106 9 0 0 0 4.1E-05 3 62753 79.614 79.614 1 1.6687 1.9032 0 140120000 51980000 88137000 38864 81 14643 15042 61016;61017;61018 61018 VSHLLGINVTDFTR 14 0 1 Unmodified _VSHLLGINVTDFTR_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.9591 3 524.622857 1570.84674 81998.26 0.61056 0.00032032 -0.037139 -1.9484E-05 0.57343 0.00030083 524.622936997285 527.958870850552 112.12 0.94653 112.12 111.94 112.89 0 222 51 9 0 0 0 0.000955 1 64997 39.427 39.427 1 3.1147 2.6801 0 51759000 12947000 38813000 38865 81 14643 15042 61019 61019 VSHLLGINVTDFTR 14 0 1 Unmodified _VSHLLGINVTDFTR_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.9591 3 524.622857 1570.84674 83111.52 0.41205 0.00021617 0.17033 8.936E-05 0.58239 0.00030553 524.623027138716 527.958987394323 111.81 0.60704 111.81 111.63 112.23 0 169 33 8 0 0 0 5.648E-06 1 63907 81.311 81.311 1 2.8994 2.5305 0 80077000 19885000 60192000 38866 81 14643 15042 61020 61020 VSHLLGINVTDFTR 14 0 1 Unmodified _VSHLLGINVTDFTR_ 0 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.4337 2 786.430647 1570.84674 NaN NaN NaN 0.26731 0.00021022 NaN NaN NaN NaN 111.81 0.27938 111.81 111.68 111.96 0 0 0 0 0.0048629 1 63898 57.175 47.221 1 NaN NaN 0 9107800 0 9107800 38867 81 14643 15042 61021 61021 VSHSPALSSDVR 12 0 1 Unmodified _VSHSPALSSDVR_ 0 0 0 Q68CP9;F8WCU9;F8VWP4;Q8NBP1;F8W108 Q68CP9 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.8273 2 627.825483 1253.63641 84605.42 0.79021 0.00049611 -0.61315 -0.00038495 0.17706 0.00011116 627.82525073138 633.329006861059 24.393 0.21125 24.393 24.237 24.449 0 21 7 5 0 0 0 0.013411 1 10138 44.318 29.651 1 0.90446 0.93843 0 5679400 3155100 2524300 38868 1839 14644 15043 61022 61022 VSIAVLR 7 0 1 Unmodified _VSIAVLR_ 0 0 0 P36507;Q7Z370;G5E9C7;A0A1B0GUL7 P36507 P36507 MAP2K2;DKFZp686L02273 Dual specificity mitogen-activated protein kinase kinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 379.2496 2 379.250163 756.485774 100529.2 -0.12194 -4.6244E-05 -0.0018872 -7.1574E-07 -0.12382 -4.696E-05 379.250069565187 384.254185876933 67.219 0.71588 67.219 66.819 67.535 0 137 55 4 0 0 0 0.026834 1 38838 80.294 16.851 1 2.3129 2.2991 0 8460500 2858700 5601800 38869 1547 14645 15044 61023 61023 VSIAVLR 7 0 1 Unmodified _VSIAVLR_ 0 0 0 P36507;Q7Z370;G5E9C7;A0A1B0GUL7 P36507 P36507 MAP2K2;DKFZp686L02273 Dual specificity mitogen-activated protein kinase kinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 384.2542 2 379.250163 756.485774 100744.4 -0.091733 -3.479E-05 -0.077202 -2.9279E-05 -0.16893 -6.4068E-05 379.250048929676 384.25418348835 65.902 0.65929 65.902 65.551 66.211 0 140 56 4 0 0 0 0.03394 1 38857 63.148 26.561 1 2.3495 2.3296 0 15798000 4492700 11306000 38870 1547 14645 15044 61024 61024 VSIDPESNIISIWNNGK 17 1 0 Unmodified _VSIDPESNIISIWNNGK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 943.4885 2 943.486347 1884.95814 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.16 1 118.16 117.66 118.66 7.6294E-06 0 0 0 0.00053534 1 77647 73.881 59.975 1 38871 1679 14646 15045 61025 61025 VSIDPESNIISIWNNGK 17 1 0 Unmodified _VSIDPESNIISIWNNGK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 947.494 2 943.486347 1884.95814 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.79 1 130.79 130.29 131.29 0 0 0 0 0.00048025 1 79305 63.76 49.341 1 38872 1679 14646 15045 61026 61026 VSILSTFLAPFK 12 1 0 Unmodified _VSILSTFLAPFK_ 0 0 0 Q9NS39 Q9NS39 Q9NS39 ADARB2 Double-stranded RNA-specific editase B2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.3984 2 661.889564 1321.76457 78877.77 0.19649 0.00013005 0.12479 8.2598E-05 0.32128 0.00021265 662.390885096602 665.896862934153 133.37 0.23982 133.37 133.22 133.46 0 24 6 5 0 0 0 2.6269E-05 1 87332 100.48 84.862 1 2.0545 2.062 0 7505400 3230600 4274800 38873 2066 14647 15046 61027 61027 VSISEGDDKIEYR 13 1 1 Unmodified _VSISEGDDKIEYR_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.2506 3 504.250977 1509.7311 85435.66 0.41663 0.00021009 -0.20934 -0.00010556 0.20729 0.00010452 504.250586751118 510.258402626125 47.897 0.79979 47.897 47.661 48.461 -3.8147E-06 278 69 7 0 0 0 0.0080355 2 25966 34.685 34.685 1 0.74159 0.88357 0 48772000 30925000 17847000 38874 1506 14648 15047 61028;61029 61028 VSISEGDDKIEYR 13 1 1 Unmodified _VSISEGDDKIEYR_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.8854 2 755.872827 1509.7311 NaN NaN NaN -0.0050381 -3.8082E-06 NaN NaN NaN NaN 47.839 0.073727 47.839 47.809 47.883 0 0 0 0 0.00018819 1 26005 95.094 67.613 1 NaN NaN 0 4752700 0 4752700 38875 1506 14648 15047 61030 61030 VSISEGDDKIEYR 13 1 1 Unmodified _VSISEGDDKIEYR_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.2516 3 504.250977 1509.7311 85988.55 0.483 0.00024356 0.33646 0.00016966 0.81947 0.00041322 504.251182321029 510.258471182993 46.6 0.61278 46.6 46.255 46.868 3.8147E-06 242 49 7 0 0 0 0.0015591 1 25688 52.5 47.422 1 0.77569 0.90793 0 52854000 29424000 23430000 38876 1506 14648 15047 61031 61031 VSISEGDDKIEYR 13 1 1 Unmodified _VSISEGDDKIEYR_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.8708 2 755.872827 1509.7311 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.603 1 46.603 46.103 47.103 0 0 0 0 0.010738 1 25765 65.563 30.051 1 38877 1506 14648 15047 61032 61032 VSISEGDDKIEYR 13 1 1 Unmodified _VSISEGDDKIEYR_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.2586 3 504.250977 1509.7311 83621.83 0.38805 0.00019567 -0.15244 -7.6866E-05 0.23561 0.00011881 504.250975299305 510.258305924232 55.961 0.90966 55.961 55.671 56.581 0 344 57 10 0 0 0 0.00073242 2 28144 55.213 50.036 1 0.91994 0.8108 0 37689000 19205000 18484000 38878 1506 14648 15047 61033;61034 61034 VSISEGDDKIEYR 13 1 1 Unmodified _VSISEGDDKIEYR_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 764.8844 2 755.872827 1509.7311 69318.08 0.64992 0.00049125 -0.2363 -0.00017861 0.41362 0.00031264 755.872521767036 764.883981513487 55.963 0.58912 55.963 55.729 56.319 3.8147E-06 203 38 7 0 0 0 0.001149 1 28150 69.864 63.174 1 0.89677 0.75689 0 7766300 3669500 4096800 38879 1506 14648 15047 61035 61035 VSISEGDDKIEYR 13 1 1 Unmodified _VSISEGDDKIEYR_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.2589 3 504.250977 1509.7311 84317.97 0.39253 0.00019793 -0.015883 -8.009E-06 0.37665 0.00018992 504.251011074283 510.258409403025 56.55 0.83089 56.55 56.234 57.065 0 350 58 9 0 0 0 0.0002551 2 27815 50.155 45.076 1 0.88347 0.75159 0 35021000 18069000 16952000 38880 1506 14648 15047 61036;61037 61037 VSISEGDDKIEYR 13 1 1 Unmodified _VSISEGDDKIEYR_ 0 0 1 Q96BS4;P22087;M0QXL5;M0R299;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 764.8842 2 755.872827 1509.7311 69596.41 0.66294 0.0005011 -0.12523 -9.4659E-05 0.53771 0.00040644 755.87267817161 764.884003533363 56.577 0.49737 56.577 56.316 56.813 0 210 35 8 0 0 0 0.0029786 1 27828 61.435 54.902 1 0.89243 0.7531 0 8952700 5381800 3570900 38881 1506 14648 15047 61038 61038 VSITEAMHR 9 0 1 Oxidation (M) _VSITEAM(ox)HR_ VSITEAM(1)HR VSITEAM(45.16)HR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.1826 3 353.846569 1058.51788 102142.3 -0.092715 -3.2807E-05 -0.1738 -6.15E-05 -0.26652 -9.4306E-05 353.84636308092 357.182608734235 20.895 0.2339 20.895 20.763 20.997 0 37 9 5 0 0 0 0.0081541 1 7276 45.161 30.487 1 1.7551 1.8285 0 10505000 3585800 6919600 38882 1754 14649 15048 61039 61039 1620 VSITEAMHR 9 0 1 Oxidation (M) _VSITEAM(ox)HR_ VSITEAM(1)HR VSITEAM(50.04)HR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.2715 2 530.266216 1058.51788 NaN NaN NaN 1.4798 0.00078469 NaN NaN NaN NaN 21.061 0.45235 21.061 20.763 21.215 -1.9073E-06 0 0 0 0.01266 1 7404 50.04 33.264 1 NaN NaN 0 9943300 0 9943300 38883 1754 14649 15048 61040 61040 1620 VSITEAMHR 9 0 1 Oxidation (M) _VSITEAM(ox)HR_ VSITEAM(1)HR VSITEAM(54.71)HR 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.2709 2 530.266216 1058.51788 83336.89 0.60892 0.00032289 -0.10553 -5.5957E-05 0.50339 0.00026693 530.26617034882 535.270341438713 20.724 0.22971 20.724 20.599 20.829 0 23 6 5 0 0 0 0.0075111 1 7010 54.712 39.342 1 2.7899 2.7399 0 13679000 3866600 9812900 38884 1754 14649 15048 61041 61041 1620 VSIVNQYGK 9 1 0 Unmodified _VSIVNQYGK_ 0 0 0 Q9GZR2;B4E331;B4DJ95;A0A0C4DG22 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.2791 2 504.279649 1006.54475 NaN NaN NaN -0.28283 -0.00014263 NaN NaN NaN NaN 39.957 0.45763 39.957 39.807 40.264 0 0 0 0 0.010474 1 20769 66.351 45.831 1 NaN NaN 0 12821000 12821000 0 38885 2021 14650 15049 61042 61042 VSIVNQYGK 9 1 0 Unmodified _VSIVNQYGK_ 0 0 0 Q9GZR2;B4E331;B4DJ95;A0A0C4DG22 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.2802 2 504.279649 1006.54475 NaN NaN NaN -0.046943 -2.3672E-05 NaN NaN NaN NaN 38.979 0.37611 38.979 38.763 39.139 0 0 0 0 0.00066859 1 20534 90.37 57.76 1 NaN NaN 0 21609000 21609000 0 38886 2021 14650 15049 61043 61043 VSIVNQYGK 9 1 0 Unmodified _VSIVNQYGK_ 0 0 0 Q9GZR2;B4E331;B4DJ95;A0A0C4DG22 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 508.2867 2 504.279649 1006.54475 86269.63 0.25332 0.00012775 -0.24781 -0.00012496 0.0055176 2.7824E-06 504.279425298789 508.286464417729 45.609 0.47318 45.609 45.392 45.865 3.8147E-06 175 34 6 0 0 0 0.0033882 2 21863 71.922 55.628 1 1.4613 1.1517 0 5589600 2341800 3247800 38887 2021 14650 15049 61044;61045 61045 VSIVNQYGK 9 1 0 Unmodified _VSIVNQYGK_ 0 0 0 Q9GZR2;B4E331;B4DJ95;A0A0C4DG22 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.2791 2 504.279649 1006.54475 85539.2 0.38316 0.00019322 -0.1452 -7.3222E-05 0.23796 0.00012 504.279404400982 508.28655517256 45.706 0.57334 45.706 45.479 46.053 -3.8147E-06 149 37 6 0 0 0 0.017716 2 21320 52.716 45.981 1 1.6283 1.3341 0 4983400 1749800 3233600 38888 2021 14650 15049 61046;61047 61046 VSIVTPEDILR 11 0 1 Unmodified _VSIVTPEDILR_ 0 0 0 A6NJA2;D3DUG9;B2RD79;P54578 A6NJA2 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.3642 2 621.358628 1240.7027 NaN NaN NaN 0.1156 7.1827E-05 NaN NaN NaN NaN 107.84 0.52222 107.84 107.63 108.15 0 0 0 0 0.0030649 1 68787 68.557 28.556 1 NaN NaN 0 7056400 0 7056400 38889 686 14651 15050 61048 61048 VSLAGACGVGGYGSR 15 0 1 Unmodified _VSLAGACGVGGYGSR_ 0 0 0 CON__P13647;P13647;F8VV57 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.8441 2 705.84335 1409.67215 NaN NaN NaN -0.0049792 -3.5146E-06 NaN NaN NaN NaN 58.103 0.51118 58.103 57.924 58.435 0 0 0 0 0.00050083 1 33000 71.548 55.658 1 NaN NaN 0 31522000 31522000 0 + 38890 1162 14652 15051 61049 61049 VSLDVNHFAPDELTVK 16 1 0 Unmodified _VSLDVNHFAPDELTVK_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 595.313 3 595.312348 1782.91521 77659.39 0.81877 0.00048742 0.68101 0.00040541 1.4998 0.00089283 595.64706290297 597.984119593338 97.57 1.2924 97.57 97.145 98.437 0 792 107 12 0 0 0 4.6261E-07 3 59636 95.347 95.347 1 1.3352 1.5883 0 599350000 255850000 343500000 38891 1443 14653 15052 61050;61051;61052 61051 VSLDVNHFAPDELTVK 16 1 0 Unmodified _VSLDVNHFAPDELTVK_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.6472 3 595.312348 1782.91521 76990.38 0.98021 0.00058353 0.14482 8.6215E-05 1.125 0.00066975 595.312482891678 597.983837065466 96.785 1.2472 96.785 96.341 97.588 -7.6294E-06 711 102 11 0 0 0 1.9237E-12 3 60175 112.8 112.8 1 1.3204 1.5571 0 745980000 328530000 417450000 38892 1443 14653 15052 61053;61054;61055 61054 VSLDVNHFAPDELTVK 16 1 0 Unmodified _VSLDVNHFAPDELTVK_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 595.6467 3 595.312348 1782.91521 77175.51 0.67383 0.00040114 0.31743 0.00018897 0.99126 0.00059011 595.31254506209 597.983855702611 110.08 0.61857 110.08 109.82 110.44 0 252 31 11 0 0 0 8.8121E-05 2 63450 55.864 55.864 1 1.0717 0.92439 0 100990000 48266000 52723000 38893 1443 14653 15052 61056;61057 61057 VSLDVNHFAPDELTVK 16 1 0 Unmodified _VSLDVNHFAPDELTVK_ 0 0 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 598.3188 3 595.312348 1782.91521 77285.28 0.78411 0.00046679 0.033556 1.9976E-05 0.81767 0.00048677 595.312408239669 597.983723839546 109.92 0.63747 109.92 109.63 110.27 0 245 32 11 0 0 0 4.6825E-05 2 62389 65.107 65.107 1 1.1577 0.98926 0 107070000 50146000 56925000 38894 1443 14653 15052 61058;61059 61059 VSLEDLYNGK 10 1 0 Unmodified _VSLEDLYNGK_ 0 0 0 A0A024R6S1;O60884;A0A087WT48 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 573.3 2 569.292953 1136.57135 80034.72 0.52766 0.00030039 -0.061084 -3.4775E-05 0.46657 0.00026562 569.293082702892 573.29990476646 81.616 0.7192 81.616 81.305 82.024 0 218 62 5 0 0 0 0.00030272 1 48579 90.709 41.291 1 1.4562 1.5485 0 31712000 12922000 18790000 38895 208 14654 15053 61060 61060 VSLEDLYNGK 10 1 0 Unmodified _VSLEDLYNGK_ 0 0 0 A0A024R6S1;O60884;A0A087WT48 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 573.3011 2 569.292953 1136.57135 81127.89 0.58951 0.0003356 -0.21504 -0.00012242 0.37447 0.00021318 569.292941346574 573.299883299301 80.681 0.69623 80.681 80.328 81.024 0 225 56 6 0 0 0 0.0016073 2 49050 72.879 26.489 1 1.4918 1.6439 0 43350000 18411000 24939000 38896 208 14654 15053 61061;61062 61061 VSLEDLYNGK 10 1 0 Unmodified _VSLEDLYNGK_ 0 0 0 A0A024R6S1;O60884;A0A087WT48 A0A024R6S1 A0A024R6S1 DNAJA2 DnaJ homolog subfamily A member 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.2933 2 569.292953 1136.57135 81043.14 0.55301 0.00031483 -0.0055843 -3.1791E-06 0.54743 0.00031165 569.293027054493 573.299766452517 93.276 0.62854 93.276 92.955 93.583 0 125 38 4 0 0 0 0.024135 1 52025 45.161 29.28 1 0.93345 0.76289 0 2624700 1357600 1267100 38897 208 14654 15053 61063 61063 VSLEPHQGPGTPESK 15 1 0 Unmodified _VSLEPHQGPGTPESK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.8947 2 781.894094 1561.77364 68177.06 0.88733 0.0006938 0.44707 0.00034956 1.3344 0.0010434 782.396150161747 785.901360899894 28.207 0.20045 28.207 28.144 28.344 0 30 13 5 0 0 0 2.0144E-38 2 13262 166.7 166.7 1 0.68847 0.73362 0 15978000 8146200 7831300 38898 186;1747 14655 15054 61064;61065 61064 VSLEPHQGPGTPESK 15 1 0 Unmodified _VSLEPHQGPGTPESK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.2689 3 521.598488 1561.77364 84372.89 0.11155 5.8182E-05 0.019909 1.0385E-05 0.13145 6.8567E-05 521.598583510009 524.269492428695 27.45 0.25547 27.45 27.32 27.576 0 64 12 8 0 0 0 6.9149E-05 1 12731 70.98 70.98 1 0.72202 0.802 0 49817000 27777000 22040000 38899 186;1747 14655 15054 61066 61066 VSLEPHQGPGTPESK 15 1 0 Unmodified _VSLEPHQGPGTPESK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.8947 2 781.894094 1561.77364 68099.54 0.35661 0.00027883 -0.14158 -0.0001107 0.21503 0.00016813 782.395632687802 785.901037346424 27.449 0.18346 27.449 27.34 27.524 0 32 8 6 0 0 0 2.7466E-47 2 12753 177.81 177.81 1 0.62969 0.65627 0 19111000 11378000 7733100 38900 186;1747 14655 15054 61067;61068 61068 VSLEPHQGPGTPESK 15 1 0 Unmodified _VSLEPHQGPGTPESK_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;Q7Z757;Q96HN5;H0YFY6;Q9UNL7;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.27 3 521.598488 1561.77364 84420.3 0.049141 2.5632E-05 0.23842 0.00012436 0.28756 0.00014999 521.598757211335 524.269939833326 32.113 0.39857 32.113 31.958 32.357 0 87 20 6 0 0 0 0.046987 1 13757 17.078 17.078 1 1.0073 0.79275 0 4008000 2051900 1956100 38901 186;1747 14655 15054 61069 61069 VSLLGPVTTPEHQLLK 16 1 0 Unmodified _VSLLGPVTTPEHQLLK_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;Q9H9L9 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.3397 3 578.004967 1730.99307 82007.96 0.56546 0.00032684 -0.0054908 -3.1737E-06 0.55997 0.00032367 578.339257574305 580.676409612465 97.025 0.5235 97.025 96.733 97.256 0 105 46 4 0 0 0 0.0064689 1 59046 28.212 24.771 1 0.98007 0.97717 0 9678500 4815400 4863100 38902 68 14656 15055 61070 61070 VSLLGPVTTPEHQLLK 16 1 0 Unmodified _VSLLGPVTTPEHQLLK_ 0 0 0 B2RE34;A0A024R136;Q9H0H5;Q9H9L9 B2RE34 B2RE34 RACGAP1 Rac GTPase-activating protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.6763 3 578.004967 1730.99307 79646.95 0.6315 0.00036501 -0.39637 -0.0002291 0.23513 0.0001359 578.339047485604 580.676140340018 109.25 0.47095 109.25 108.99 109.46 0 83 22 5 0 0 0 0.008608 1 62925 24.784 24.784 1 2.1167 1.6976 0 7532100 2601300 4930800 38903 68 14656 15055 61071 61071 VSLLNEQFLPLIR 13 0 1 Unmodified _VSLLNEQFLPLIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 776.9628 2 771.456133 1540.89771 69577.84 0.59983 0.00046275 -0.28893 -0.0002229 0.3109 0.00023985 771.455854418133 776.460077866792 128.4 0.67436 128.4 128.12 128.79 0 314 44 10 0 0 0 1.4632E-18 1 83601 137.98 123 1 0.92812 1.083 0 195910000 101030000 94873000 38904 897 14657 15056 61072 61072 VSLLNEQFLPLIR 13 0 1 Unmodified _VSLLNEQFLPLIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 776.4604 2 771.456133 1540.89771 69350.87 0.87392 0.00067419 -0.29462 -0.00022728 0.57931 0.00044691 771.95771634976 776.459913118749 134.81 0.41525 134.81 134.53 134.94 0 19 9 6 0 0 0 0.0062995 1 82532 46.352 39.333 1 1.0973 0.93945 0 40364000 20653000 19711000 38905 897 14657 15056 61073 61073 VSLLNEQFLPLIR 13 0 1 Unmodified _VSLLNEQFLPLIR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.4649 2 771.456133 1540.89771 70606.4 1.0787 0.00083216 -0.11765 -9.0758E-05 0.96104 0.0007414 771.455606933788 776.96176761731 134.78 0.3114 134.78 134.5 134.81 0 20 7 6 0 0 0 8.5149E-39 1 81564 183.03 183.03 1 1.1259 0.98242 0 61803000 28384000 33420000 38906 897 14657 15056 61074 61074 VSLYGYLR 8 0 1 Unmodified _VSLYGYLR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.7703 2 485.77146 969.528367 85095.57 0.35395 0.00017194 -1.116 -0.00054213 -0.76208 -0.00037019 485.770814084841 490.775042420374 83.278 0.3633 83.278 83.037 83.401 0 124 26 6 0 0 0 0.0010255 2 51025 114.72 86.614 1 0.98112 1.1347 0 68567000 30869000 37698000 38907 1742 14658 15057 61075;61076 61076 VSLYGYLR 8 0 1 Unmodified _VSLYGYLR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 485.7712 2 485.77146 969.528367 85931.37 0.48531 0.00023575 -0.055061 -2.6747E-05 0.43025 0.000209 485.771300377142 490.775506273577 97.143 0.73648 97.143 96.756 97.493 0 178 36 8 0 0 0 0.024215 2 54499 56.011 44.6 1 1.4473 1.1812 0 15550000 7106600 8443100 38908 1742 14658 15057 61077;61078 61078 VSLYGYLR 8 0 1 Unmodified _VSLYGYLR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.7711 2 485.77146 969.528367 86058.04 0.1198 5.8195E-05 0.19294 9.3727E-05 0.31274 0.00015192 485.771388997808 490.77563404405 96.921 0.82229 96.921 96.462 97.284 0 172 40 8 0 0 0 0.030669 2 53602 51.787 40.376 1 1.3855 1.1331 0 13193000 5297800 7895400 38909 1742 14658 15057 61079;61080 61080 VSNLQYLHSYLTYIK 15 1 0 Unmodified _VSNLQYLHSYLTYIK_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 617.3348 3 614.664722 1840.97234 79679.54 0.66917 0.00041131 -0.41434 -0.00025468 0.25483 0.00015664 614.664618880366 617.335234569873 106.05 0.42775 106.05 105.86 106.29 0 104 30 5 0 0 0 0.030788 1 65783 20.389 20.389 1 1.0191 1.0058 0 9287400 5236400 4051000 38910 2101 14659 15058 61081 61081 VSNLQYLHSYLTYIK 15 1 0 Unmodified _VSNLQYLHSYLTYIK_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.6655 3 614.664722 1840.97234 78892.31 0.55691 0.00034232 0.28332 0.00017415 0.84024 0.00051647 614.664818140801 617.336203933462 104.86 0.5949 104.86 104.62 105.22 0 143 47 5 0 0 0 0.019377 1 66674 21.831 21.831 1 1.1245 1.1436 0 12556000 6849900 5705900 38911 2101 14659 15058 61082 61082 VSNLQYLHSYLTYIK 15 1 0 Unmodified _VSNLQYLHSYLTYIK_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 617.3367 3 614.664722 1840.97234 77281.03 0.23477 0.00014431 0.6688 0.00041109 0.90357 0.00055539 614.999312017352 617.336713811824 116.73 0.55956 116.73 116.38 116.94 0 82 21 6 0 0 0 0.055238 1 68603 15.392 15.392 1 1.8272 1.4399 0 5609800 2481500 3128400 38912 2101 14659 15058 61083 61083 VSPEEVTIYNHPGIQAELR 19 0 1 Unmodified _VSPEEVTIYNHPGIQAELR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.0397 3 718.039287 2151.09603 72886.18 0.86344 0.00061998 -0.19636 -0.00014099 0.66709 0.00047899 718.373142073619 721.375501108609 84.878 0.575 84.878 84.584 85.159 -7.6294E-06 276 49 8 0 0 0 1.1481E-05 1 52119 52.19 52.19 1 0.7413 0.81175 0 32319000 16914000 15405000 38913 1937 14660 15059 61084 61084 VSPEEVTIYNHPGIQAELR 19 0 1 Unmodified _VSPEEVTIYNHPGIQAELR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.0385 3 718.039287 2151.09603 72300.92 0.75419 0.00054154 0.40941 0.00029397 1.1636 0.00083551 718.373425991616 721.375489841041 98.608 0.62183 98.608 98.314 98.936 7.6294E-06 207 39 8 0 0 0 0.028202 1 55617 17.824 17.824 1 0.71932 0.60335 0 4145000 2029000 2116000 38914 1937 14660 15059 61085 61085 VSPEEVTIYNHPGIQAELR 19 0 1 Unmodified _VSPEEVTIYNHPGIQAELR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.0399 3 718.039287 2151.09603 72525.01 0.78872 0.00056633 0.18134 0.00013021 0.97006 0.00069654 718.039107472429 721.375137719326 98.41 0.62105 98.41 98.084 98.705 0 185 38 7 0 0 0 0.048539 1 54717 12.481 12.481 1 0.68936 0.60963 0 4008500 2168100 1840400 38915 1937 14660 15059 61086 61086 VSPESNEDISTTVVYR 16 0 1 Unmodified _VSPESNEDISTTVVYR_ 0 0 0 Q68D38;B3KM58;B8ZZC5;B8ZZA8 Q68D38 Q68D38 DKFZp686O15119;GLS MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.4434 2 898.439063 1794.86357 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.886 1 69.886 69.386 70.386 0 0 0 0 0.00044576 1 40646 78.486 62.947 1 38916 902 14661 15060 61087 61087 VSPESNEDISTTVVYR 16 0 1 Unmodified _VSPESNEDISTTVVYR_ 0 0 0 Q68D38;B3KM58;B8ZZC5;B8ZZA8 Q68D38 Q68D38 DKFZp686O15119;GLS ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 903.4456 2 898.439063 1794.86357 NaN NaN NaN 0.27203 0.0002444 NaN NaN NaN NaN 68.852 0.16196 68.852 68.73 68.892 0 0 0 0 1.0018E-06 1 40907 89.959 76.296 1 NaN NaN 0 4709300 0 4709300 38917 902 14661 15060 61088 61088 VSQEHPVVLTK 11 1 0 Unmodified _VSQEHPVVLTK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 622.859 2 618.85097 1235.68739 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.319 1 27.319 26.819 27.819 0 0 0 0 0.00032064 1 12559 78.342 40.255 1 38918 148 14662 15061 61089 61089 VSQEHPVVLTK 11 1 0 Unmodified _VSQEHPVVLTK_ 0 0 0 Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327;Q5R209 Q5R210 Q5R210 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8586 2 618.85097 1235.68739 79781.9 0.61454 0.00038031 0.28759 0.00017797 0.90213 0.00055828 618.851330501948 622.858199937015 26.748 0.19439 26.748 26.627 26.822 0 23 8 4 0 0 0 0.00032724 2 12130 87.184 69.32 1 1.5898 1.6528 0 9933900 3435600 6498300 38919 148 14662 15061 61090;61091 61090 VSQLLAVTGK 10 1 0 Unmodified _VSQLLAVTGK_ 0 0 0 J3KS23;A0A024R6X2;Q13951 J3KS23 J3KS23 CBFB Core-binding factor subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.3185 2 508.310949 1014.60735 NaN NaN NaN 0.473 0.00024043 NaN NaN NaN NaN 61.416 0.35561 61.416 61.207 61.562 -3.8147E-06 0 0 0 0.015795 1 35114 57.348 46.52 1 NaN NaN 0 3942600 0 3942600 38920 210 14663 15062 61092 61092 VSQLLAVTGK 10 1 0 Unmodified _VSQLLAVTGK_ 0 0 0 J3KS23;A0A024R6X2;Q13951 J3KS23 J3KS23 CBFB Core-binding factor subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 512.3177 2 508.310949 1014.60735 NaN NaN NaN 0.040305 2.0488E-05 NaN NaN NaN NaN 60.071 0.28156 60.071 59.953 60.234 0 0 0 0 0.0050896 1 34975 70.1 49.545 1 NaN NaN 0 5039400 0 5039400 38921 210 14663 15062 61093 61093 VSQPEVGAAIK 11 1 0 Unmodified _VSQPEVGAAIK_ 0 0 0 Q9NYB0 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.8196 2 549.811313 1097.60807 83772.64 0.73335 0.0004032 0.18251 0.00010035 0.91586 0.00050355 549.811603159586 553.818288397686 42.727 0.44052 42.727 42.512 42.953 0 105 36 4 0 0 0 0.0036568 1 23087 59.426 35.997 1 1.6018 1.6064 0 13806000 5595000 8211400 38922 2082 14664 15063 61094 61094 VSQTPESLDFLK 12 1 0 Unmodified _VSQTPESLDFLK_ 0 0 0 Q4KMR3;Q12965 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.3597 2 682.358825 1362.7031 75392.75 0.86828 0.00059248 -0.90029 -0.00061432 -0.032009 -2.1842E-05 682.358681562461 686.365737732299 92.156 0.82297 92.156 91.846 92.669 0 298 79 6 0 0 0 0.0057583 1 55756 50.13 38.911 1 1.1157 1.2033 0 37449000 17563000 19887000 38923 1703 14665 15064 61095 61095 VSQTPESLDFLK 12 1 0 Unmodified _VSQTPESLDFLK_ 0 0 0 Q4KMR3;Q12965 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 686.3663 2 682.358825 1362.7031 76045.66 0.61085 0.00041682 -1.9325 -0.0013187 -1.3217 -0.00090186 682.856384527032 686.365830480632 105.37 0.65026 105.37 105.02 105.67 0 153 46 6 0 0 0 0.0011662 1 59218 61.833 49.217 1 1.1624 0.95167 0 5442400 2493000 2949400 38924 1703 14665 15064 61096 61096 VSSLMWEVR 9 0 1 Oxidation (M) _VSSLM(ox)WEVR_ VSSLM(1)WEVR VSSLM(56.26)WEVR 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.7849 2 561.784241 1121.55393 80097.89 0.75628 0.00042486 0.899 0.00050504 1.6553 0.00092991 561.78430191238 566.789498504566 70.541 0.44681 70.541 70.305 70.752 0 133 36 5 0 0 0 0.006681 1 40982 56.258 42.679 1 0.73636 0.76742 0 21591000 12690000 8900600 38925 1942 14666 15065 61097 61097 1784 VSSLMWEVR 9 0 1 Oxidation (M) _VSSLM(ox)WEVR_ VSSLM(1)WEVR VSSLM(66.69)WEVR 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.789 2 561.784241 1121.55393 80097.77 0.65979 0.00037066 -0.68692 -0.0003859 -0.027122 -1.5237E-05 561.784128779036 566.788604624461 70.885 0.46524 70.885 70.702 71.168 0 143 35 7 0 0 0 0.002641 1 41306 66.692 45.392 1 0.80307 0.83091 0 20321000 9911600 10409000 38926 1942 14666 15065 61098 61098 1784 VSSLMWEVR 9 0 1 Oxidation (M) _VSSLM(ox)WEVR_ VSSLM(1)WEVR VSSLM(101.64)WEVR 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.785 2 561.784241 1121.55393 82294.95 0.72243 0.00040585 0.69711 0.00039163 1.4195 0.00079748 561.78424742987 566.789502086956 69.23 0.37827 69.23 69.055 69.433 -7.6294E-06 124 31 6 0 0 0 0.00016288 1 41181 101.64 65.763 1 0.77314 0.83332 0 26024000 13964000 12059000 38927 1942 14666 15065 61099 61099 1784 VSSLMWEVR 9 0 1 Oxidation (M) _VSSLM(ox)WEVR_ VSSLM(1)WEVR VSSLM(42.19)WEVR 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.7837 2 561.784241 1121.55393 79746 0.47836 0.00026874 -0.31827 -0.0001788 0.16009 8.9934E-05 561.784155918485 566.788678715854 69.58 0.39153 69.58 69.363 69.754 0 142 32 6 0 0 0 0.019191 1 41337 42.19 32.28 1 0.80512 0.84659 0 23088000 12904000 10184000 38928 1942 14666 15065 61100 61100 1784 VSSQFDPNK 9 1 0 Unmodified _VSSQFDPNK_ 0 0 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.2513 2 511.251089 1020.48762 84454.8 0.41706 0.00021322 -0.072172 -3.6898E-05 0.34489 0.00017632 511.250866751914 515.258244449927 24.169 0.60287 24.169 23.936 24.538 0 68 25 6 0 0 0 0.001489 2 9960 84.743 84.743 1 0.86279 0.84649 0 20530000 11254000 9276200 38929 1676 14667 15066 61101;61102 61101 VSSQFDPNK 9 1 0 Unmodified _VSSQFDPNK_ 0 0 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.2502 2 511.251089 1020.48762 NaN NaN NaN -0.37502 -0.00019173 NaN NaN NaN NaN 23.92 0.30324 23.92 23.792 24.095 1.9073E-06 0 0 0 0.0001488 1 9716 95.741 85.83 1 NaN NaN 0 5979200 5979200 0 38930 1676 14667 15066 61103 61103 VSSQNLVAIPVYVK 14 1 0 Unmodified _VSSQNLVAIPVYVK_ 0 0 0 Q8NDP0;A0A024QZR5;Q9Y2T2;B4DRN6 Q8NDP0 Q8NDP0 DKFZp586G1518;AP3M1 AP-3 complex subunit mu-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 762.9482 2 758.940316 1515.86608 72372.99 0.58484 0.00044386 0.32999 0.00025045 0.91483 0.0006943 759.441869685162 762.947590143089 104.97 0.49905 104.97 104.69 105.18 7.6294E-06 108 39 4 0 0 0 0.034054 1 64969 41.704 41.704 1 1.7397 1.7643 0 6608900 2103700 4505300 38931 27 14668 15067 61104 61104 VSSQNLVAIPVYVK 14 1 0 Unmodified _VSSQNLVAIPVYVK_ 0 0 0 Q8NDP0;A0A024QZR5;Q9Y2T2;B4DRN6 Q8NDP0 Q8NDP0 DKFZp586G1518;AP3M1 AP-3 complex subunit mu-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 758.9406 2 758.940316 1515.86608 71567.78 0.6803 0.0005163 -0.27665 -0.00020996 0.40365 0.00030635 758.940103767814 762.947089312155 104.25 0.44333 104.25 104 104.45 0 103 35 4 0 0 0 0.01397 1 66011 35.652 35.652 1 1.6218 1.6397 0 8751800 3709000 5042800 38932 27 14668 15067 61105 61105 VSSQPVPWDFYINLK 15 1 0 Unmodified _VSSQPVPWDFYINLK_ 0 0 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 896.9682 2 896.967062 1791.91957 67974 0.79423 0.0007124 0.19886 0.00017837 0.99309 0.00089077 896.968033230335 901.474630399092 123.39 0.32889 123.39 123.25 123.58 7.6294E-06 85 23 6 0 0 0 0.01556 1 80091 32.946 32.946 1 0.69135 0.70292 0 4562500 2909300 1653200 38933 1396 14669 15068 61106 61106 VSTALSCLLGLPLR 14 0 1 Unmodified _VSTALSCLLGLPLR_ 0 0 0 A8K8K1;O00442;A6NIC1;B4DSL0 A8K8K1 A8K8K1 RTCA RNA 3-terminal phosphate cyclase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.4395 2 750.434344 1498.85413 NaN NaN NaN 0.15387 0.00011547 NaN NaN NaN NaN 127.83 0.46481 127.83 127.59 128.05 0 0 0 0 0.03177 1 83357 41.399 34.546 1 NaN NaN 0 2372700 0 2372700 38934 778 14670 15069 61107 61107 VSTDLLR 7 0 1 Unmodified _VSTDLLR_ 0 0 0 Q96HS1;F5GXG4 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 402.2342 2 402.23471 802.454868 95653.44 -0.22846 -9.1896E-05 0.55979 0.00022517 0.33133 0.00013327 402.234550672153 407.23888009764 47.775 0.79828 47.775 47.354 48.152 -3.8147E-06 183 55 5 0 0 0 0.026928 1 26739 82.913 22.569 1 1.5565 1.805 0 65496000 22825000 42672000 38935 1972 14671 15070 61108 61108 VSTPIFSTQEK 11 1 0 Unmodified _VSTPIFSTQEK_ 0 0 0 A0A024R363 A0A024R363 A0A024R363 C3orf63 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 622.8348 2 618.82716 1235.63977 81816.95 0.13832 8.5599E-05 0.26734 0.00016544 0.40566 0.00025104 618.826791247579 622.834450511394 70.791 0.32423 70.791 70.599 70.923 0 63 25 4 0 0 0 0.020897 1 36408 42.743 42.743 1 1.6704 1.3199 0 3204400 1071500 2132800 38936 129 14672 15071 61109 61109 VSTPSDYTLSFLK 13 1 0 Unmodified _VSTPSDYTLSFLK_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24 A0A024R570 A0A024R570 MEN1 Menin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.3875 2 729.379757 1456.74496 73768.57 0.70334 0.000513 -0.85687 -0.00062499 -0.15354 -0.00011199 729.379503902019 733.386310826993 106.73 0.53703 106.73 106.51 107.05 0 125 40 4 0 0 0 0.008733 1 66393 43.604 43.604 1 0.77296 0.78466 0 13558000 5952400 7606000 38937 171 14673 15072 61110 61110 VSTPSDYTLSFLK 13 1 0 Unmodified _VSTPSDYTLSFLK_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24 A0A024R570 A0A024R570 MEN1 Menin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 733.3867 2 729.379757 1456.74496 NaN NaN NaN -0.098391 -7.1764E-05 NaN NaN NaN NaN 106.18 0.52618 106.18 105.97 106.5 0 0 0 0 0.0044372 2 67494 61.435 50.606 1 NaN NaN 0 7486400 0 7486400 38938 171 14673 15072 61111;61112 61111 VSTPSDYTLSFLK 13 1 0 Unmodified _VSTPSDYTLSFLK_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24 A0A024R570 A0A024R570 MEN1 Menin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 733.3873 2 729.379757 1456.74496 72089.59 0.87878 0.00064096 -0.28693 -0.00020928 0.59185 0.00043169 729.379373513607 733.386784194104 118.33 0.5139 118.33 118.07 118.59 0 83 20 5 0 0 0 0.00026412 1 69793 67.385 67.385 1 1.409 1.1189 0 6510900 3111000 3399900 38939 171 14673 15072 61113 61113 VSTPSDYTLSFLK 13 1 0 Unmodified _VSTPSDYTLSFLK_ 0 0 0 A0A024R570;A0A024R5E3;E7EN32;A0A024R5D2;O00255;Q9UE24 A0A024R570 A0A024R570 MEN1 Menin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 733.3869 2 729.379757 1456.74496 72265.55 0.6513 0.00047504 -0.20042 -0.00014618 0.45088 0.00032886 729.379567167325 733.3868920433 118.12 0.51381 118.12 117.89 118.4 -7.6294E-06 103 22 7 0 0 0 0.014423 1 68731 37.18 37.18 1 1.4767 1.2051 0 5694000 2278200 3415800 38940 171 14673 15072 61114 61114 VSTPWLQHLSGACGVVDEAVLVCPDPSSR 29 0 1 Unmodified _VSTPWLQHLSGACGVVDEAVLVCPDPSSR_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1046.1793 3 1046.17786 3135.51175 60249.48 0.42047 0.00043989 -0.31986 -0.00033463 0.10061 0.00010526 1046.51213473974 1049.84817725887 129.28 0.38843 129.28 129.05 129.44 0 75 17 8 0 0 0 0.051916 1 78150 9.1602 9.1602 1 0.68668 0.57765 0 4475700 2749000 1726700 38941 1913 14674 15073 61115 61115 VSTTLNVAQAYYAR 14 0 1 Unmodified _VSTTLNVAQAYYAR_ 0 0 0 E9PDF6;B0I1S9;O43795 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.9102 2 778.907005 1555.79946 67948.9 0.87674 0.0006829 -0.18176 -0.00014157 0.69498 0.00054133 779.408825660915 783.91037205258 78.922 0.3414 78.922 78.709 79.05 0 90 30 4 0 0 0 9.8288E-05 1 47800 85.533 77.308 1 1.3603 1.3341 0 13914000 6601800 7312600 38942 805 14675 15074 61116 61116 VSVEYTEK 8 1 0 Unmodified _VSVEYTEK_ 0 0 0 A8K6D2;Q92979;A0A087WVM7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.7496 2 477.742565 953.470577 86985.28 0.091227 4.3583E-05 -0.4891 -0.00023366 -0.39787 -0.00019008 477.742636321013 481.748933206661 27.724 0.77994 27.724 27.339 28.119 -1.9073E-06 186 50 6 0 0 0 0.0009698 2 12824 122.13 91.516 1 1.5285 1.7231 0 113420000 45932000 67488000 38943 759 14676 15075 61117;61118 61117 VSVEYTEK 8 1 0 Unmodified _VSVEYTEK_ 0 0 0 A8K6D2;Q92979;A0A087WVM7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.7495 2 477.742565 953.470577 87282.59 0.04866 2.3247E-05 -0.017358 -8.2926E-06 0.031302 1.4955E-05 477.742476000923 481.749336472942 31.365 0.76493 31.365 30.862 31.627 1.9073E-06 184 46 7 0 0 0 0.010755 2 13223 71.501 46.503 1 1.4207 1.1063 0 12334000 5213200 7120800 38944 759 14676 15075 61119;61120 61119 VSVEYTEK 8 1 0 Unmodified _VSVEYTEK_ 0 0 0 A8K6D2;Q92979;A0A087WVM7 A8K6D2 A8K6D2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 477.7426 2 477.742565 953.470577 86826.56 0.28863 0.00013789 0.1116 5.3317E-05 0.40023 0.00019121 477.742415073418 481.749677051309 31.434 0.61194 31.434 31.212 31.824 1.9073E-06 140 32 7 0 0 0 0.019273 1 12797 59.245 52.421 1 1.3575 1.1178 0 10489000 4247900 6241400 38945 759 14676 15075 61121 61121 VSVFFGGLSIK 11 1 0 Unmodified _VSVFFGGLSIK_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 577.3349 2 577.334424 1152.6543 80142.27 0.73691 0.00042544 -0.14793 -8.5403E-05 0.58899 0.00034004 577.334190721088 581.341390718332 114.07 0.81911 114.07 113.65 114.47 -7.6294E-06 270 58 6 0 0 0 0.001099 1 72083 70.1 66.354 1 1.2985 1.4031 0 42507000 19758000 22749000 38946 1359;521 14677 15076 61122 61122 VSVFFGGLSIK 11 1 0 Unmodified _VSVFFGGLSIK_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.342 2 577.334424 1152.6543 80700.1 0.66086 0.00038154 -0.14647 -8.4564E-05 0.51439 0.00029697 577.334223498178 581.341343374766 113.38 0.88319 113.38 112.98 113.86 0 313 61 8 0 0 0 0.00035056 3 73328 85.355 85.355 1 1.2882 1.3319 0 32991000 14063000 18929000 38947 1359;521 14677 15076 61123;61124;61125 61124 VSVFFGGLSIK 11 1 0 Unmodified _VSVFFGGLSIK_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.3413 2 577.334424 1152.6543 79828.87 0.66664 0.00038488 0.040631 2.3458E-05 0.70727 0.00040833 577.334397921088 581.341300399315 125.39 0.60542 125.39 125.11 125.71 0 91 22 6 0 0 0 0.022516 2 75177 42.718 38.971 1 0.74184 0.58776 0 4880400 2981100 1899300 38948 1359;521 14677 15076 61126;61127 61127 VSVFFGGLSIK 11 1 0 Unmodified _VSVFFGGLSIK_ 0 0 0 O00148;B4DX78;K7EQN7;A0A024R7H0;A0A0D9SEM9 O00148;A0A0D9SEM9 O00148 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 577.3356 2 577.334424 1152.6543 80062.15 0.6449 0.00037232 -0.057323 -3.3095E-05 0.58758 0.00033923 577.334357778761 581.341405636697 125.13 0.55066 125.13 124.89 125.45 -7.6294E-06 107 23 6 0 0 0 0.026442 2 74096 40.715 37.556 1 0.69786 0.57066 0 5536500 3095900 2440600 38949 1359;521 14677 15076 61128;61129 61129 VSVGEFSAEGEGNSK 15 1 0 Unmodified _VSVGEFSAEGEGNSK_ 0 0 0 E5RJN7;E7EVI1;B7Z1P6;A0A0A0MTC4;A0A0A0MTD1;Q2TBD5;F8VPI7;A8K276;Q4LE57;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;A0A024R7X7;Q9NUL3;G5EA18 E5RJN7 E5RJN7 STAU2;STAU2 variant protein Double-stranded RNA-binding protein Staufen homolog 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.8458 2 748.84681 1495.67907 NaN NaN NaN -1.8143 -0.0013587 NaN NaN NaN NaN 50.382 0.22146 50.382 50.21 50.432 3.8147E-06 0 0 0 0.00067645 2 28423 67.997 60.351 1 NaN NaN 0 4079800 4079800 0 38950 237 14678 15077 61130;61131 61130 VSVLNVAVLENPSPFHSPFR 20 0 1 Unmodified _VSVLNVAVLENPSPFHSPFR_ 0 0 0 K7EM93;K7EIL9;K7ES22;K7ELW9;B4DXU6;A0A024R7G4;Q9NVP2 K7EM93 K7EM93 ASF1B Histone chaperone ASF1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.7337 3 737.063656 2208.16914 75840.27 0.97014 0.00071505 -0.22796 -0.00016802 0.74218 0.00054703 737.397969309211 740.733648119734 119.54 0.34515 119.54 119.31 119.65 0 51 22 5 0 0 0 0.002073 1 76936 25.888 25.888 1 0.94215 0.98557 0 4650300 2003700 2646600 38951 224 14679 15078 61132 61132 VSVLNVAVLENPSPFHSPFR 20 0 1 Unmodified _VSVLNVAVLENPSPFHSPFR_ 0 0 0 K7EM93;K7EIL9;K7ES22;K7ELW9;B4DXU6;A0A024R7G4;Q9NVP2 K7EM93 K7EM93 ASF1B Histone chaperone ASF1B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.734 3 737.063656 2208.16914 75478.88 0.84939 0.00062606 0.14846 0.00010943 0.99786 0.00073548 737.398096860393 740.73419035616 118.79 0.37755 118.79 118.61 118.99 0 71 23 5 0 0 0 0.015933 2 78290 20.446 18.623 1 0.95362 0.95727 0 6702600 3241100 3461500 38952 224 14679 15078 61133;61134 61134 VSVLNVAVLENPSPFHSPFR 20 0 1 Unmodified _VSVLNVAVLENPSPFHSPFR_ 0 0 0 K7EM93;K7EIL9;K7ES22;K7ELW9;B4DXU6;A0A024R7G4;Q9NVP2 K7EM93 K7EM93 ASF1B Histone chaperone ASF1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 740.7354 3 737.063656 2208.16914 71795.25 0.67222 0.00049547 0.90149 0.00066446 1.5737 0.0011599 737.398403868436 740.734703110203 131.21 0.289 131.21 131.1 131.38 0 61 13 7 0 0 0 0.027995 1 79629 17.031 17.031 1 1.0045 0.88124 0 1697500 766180 931340 38953 224 14679 15078 61135 61135 VSVSPVVHVR 10 0 1 Unmodified _VSVSPVVHVR_ 0 0 0 B7WPG3;C9IYN3;A8K894;D6W592;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9;A0A0S2Z610;C9JJZ7;H7BXH8 B7WPG3 B7WPG3 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 360.2168 3 360.217102 1077.62948 101472.3 0.51762 0.00018646 0.10299 3.7098E-05 0.62061 0.00022355 360.217173653749 363.553125922644 42.688 0.3829 42.688 42.512 42.895 -3.8147E-06 108 31 6 0 0 0 0.038178 1 23065 26.786 19.406 1 1.3241 1.3165 0 16263000 7931000 8331500 38954 586 14680 15079 61136 61136 VSYDMDGFCER 11 0 1 Oxidation (M) _VSYDM(ox)DGFCER_ VSYDM(1)DGFCER VSYDM(55.81)DGFCER 0 1 0 Q4KMR3;Q12965;H0YNQ8 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.776 2 697.771202 1393.52785 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.086 1 46.086 45.586 46.586 0 0 0 0 0.006852 1 24860 55.806 50.841 1 38955 1703 14681 15080 61137 61137 1536 VSYDMDGFCER 11 0 1 Oxidation (M) _VSYDM(ox)DGFCER_ VSYDM(1)DGFCER VSYDM(46.84)DGFCER 0 1 0 Q4KMR3;Q12965;H0YNQ8 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 702.7753 2 697.771202 1393.52785 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.035 1 45.035 44.535 45.535 0 0 0 0 0.01594 1 24670 46.844 41.879 1 38956 1703 14681 15080 61138 61138 1536 VSYFPTVPGVYIVSTK 16 1 0 Unmodified _VSYFPTVPGVYIVSTK_ 0 0 0 O75369;A0A024R321;Q68CT4;E7EN95;H7C5L4 O75369 O75369 FLNB;DKFZp686A1668 Filamin-B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 878.9809 2 878.979638 1755.94472 67318.09 0.81303 0.00071464 -0.26505 -0.00023298 0.54798 0.00048166 879.480995434745 882.986342582073 119.27 0.35318 119.27 119.09 119.44 7.6294E-06 112 24 6 0 0 0 0.00028041 1 78578 56.139 56.139 1 1.5745 1.5747 0 15411000 6166000 9245100 38957 1402 14682 15081 61139 61139 VSYYENVIK 9 1 0 Unmodified _VSYYENVIK_ 0 0 0 A0A0S2Z4R1;P54577;A0A0C4DGZ5 A0A0S2Z4R1 A0A0S2Z4R1 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.7998 2 557.792589 1113.57063 82651.97 0.63982 0.00035689 -0.12956 -7.2269E-05 0.51026 0.00028462 557.792834791396 561.799465623542 61.352 0.66092 61.352 61.072 61.733 0 180 62 4 0 0 0 0.0016421 2 35908 82.75 75.06 1 2.2933 2.3398 0 31203000 17701000 13502000 38958 567 14683 15082 61140;61141 61140 VTADVINAAEK 11 1 0 Unmodified _VTADVINAAEK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.8136 2 565.806228 1129.5979 81878.27 0.40621 0.00022983 -0.42666 -0.00024141 -0.02045 -1.1571E-05 565.806329198368 569.813021083963 47.074 0.66572 47.074 46.684 47.35 0 270 63 7 0 0 0 9.2249E-07 3 25373 112.36 84.183 1 3.219 3.6259 0 124330000 33304000 91024000 38959 1382 14684 15083 61142;61143;61144 61142 VTADVINAAEK 11 1 0 Unmodified _VTADVINAAEK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8063 2 565.806228 1129.5979 81577.9 0.44887 0.00025397 -0.42877 -0.0002426 0.020098 1.1372E-05 565.806402725599 569.813012719477 46.108 0.5748 46.108 45.728 46.303 3.8147E-06 218 46 7 0 0 0 0.00079418 1 25248 72.434 52.647 1 2.9863 3.3918 0 142470000 40269000 102210000 38960 1382 14684 15083 61145 61145 VTADVINAAEK 11 1 0 Unmodified _VTADVINAAEK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.8137 2 565.806228 1129.5979 80089.52 0.6347 0.00035912 -0.29922 -0.0001693 0.33548 0.00018982 565.806208966136 569.813093513642 54.192 0.62149 54.192 53.934 54.556 3.8147E-06 185 43 6 0 0 0 0.0074524 2 26925 52.579 27.656 1 2.0592 1.6364 0 6571300 2402400 4168900 38961 1382 14684 15083 61146;61147 61146 VTADVINAAEK 11 1 0 Unmodified _VTADVINAAEK_ 0 0 0 O43175;V9HW79;Q5SZU1;B3KSC3 O43175 O43175 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 565.8064 2 565.806228 1129.5979 79608.05 0.39845 0.00022545 -0.044141 -2.4975E-05 0.35431 0.00020047 565.806375631117 569.813214279778 54.65 0.62881 54.65 54.356 54.985 3.8147E-06 204 45 6 0 0 0 0.0081744 2 26713 51.276 33.052 1 1.8854 1.547 0 5148000 1982000 3166100 38962 1382 14684 15083 61148;61149 61149 VTAEVVLAHLGGGSTSR 17 0 1 Unmodified _VTAEVVLAHLGGGSTSR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 555.3049 3 551.968804 1652.88458 84164.82 0.36828 0.00020328 1.071 0.00059113 1.4392 0.00079441 552.303379442122 555.305495146566 81.197 0.55406 81.197 80.969 81.523 7.6294E-06 174 46 6 0 0 0 0.00018637 2 48397 46.701 46.701 1 1.1546 1.17 0 15177000 9191500 5985200 38963 1444 14685 15084 61150;61151 61150 VTAEVVLAHLGGGSTSR 17 0 1 Unmodified _VTAEVVLAHLGGGSTSR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.4537 2 827.449568 1652.88458 NaN NaN NaN -0.77797 -0.00064373 NaN NaN NaN NaN 79.811 0.17633 79.811 79.729 79.906 0 0 0 0 0.041392 1 48536 34.179 25.666 1 NaN NaN 0 3494500 0 3494500 38964 1444 14685 15084 61152 61152 VTAEVVLAHLGGGSTSR 17 0 1 Unmodified _VTAEVVLAHLGGGSTSR_ 0 0 0 Q96HX3;Q6IBR0;Q53EP4;P04843;F8WF32 Q96HX3 Q96HX3 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.9691 3 551.968804 1652.88458 82653.39 0.44102 0.00024343 0.62272 0.00034372 1.0637 0.00058715 552.303702127346 555.304837724348 93.161 0.38688 93.161 92.994 93.381 0 100 23 6 0 0 0 0.0060724 1 51990 25.508 25.508 1 0.7379 0.61655 0 3371300 2031500 1339800 38965 1444 14685 15084 61153 61153 VTAIEPIINHGGASASTQHLHPSLR 25 0 1 Unmodified _VTAIEPIINHGGASASTQHLHPSLR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 654.8531 4 652.350397 2605.37248 75327.02 0.48081 0.00031365 -0.72635 -0.00047383 -0.24554 -0.00016018 652.600106117561 655.103049388283 76.332 0.44392 76.332 76.146 76.59 0 138 29 7 0 0 0 0.002883 1 39836 29.959 29.959 1 2.0829 1.7773 0 4540700 1574400 2966300 38966 1945 14686 15085 61154 61154 VTAQGPGLEPSGNIANK 17 1 0 Unmodified _VTAQGPGLEPSGNIANK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.9412 2 826.933751 1651.85295 67028.59 0.76065 0.00062901 0.047002 3.8867E-05 0.80765 0.00066788 826.933669949082 830.94091703867 51.7 0.56041 51.7 51.477 52.037 0 258 46 8 0 0 0 5.1643E-45 2 28544 166.62 166.62 1 1.685 1.8787 0 61883000 22968000 38916000 38967 1504 14687 15086 61155;61156 61155 VTAQGPGLEPSGNIANK 17 1 0 Unmodified _VTAQGPGLEPSGNIANK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.9407 2 826.933751 1651.85295 67077.62 0.81232 0.00067173 -0.00073323 -6.0633E-07 0.81158 0.00067113 826.933835182517 830.940798353967 50.388 0.50993 50.388 50.156 50.666 0 214 48 6 0 0 0 2.2172E-81 2 28377 202.29 202.29 1 1.5649 1.7655 0 66142000 27213000 38929000 38968 1504 14687 15086 61157;61158 61158 VTAQGPGLEPSGNIANK 17 1 0 Unmodified _VTAQGPGLEPSGNIANK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 826.9342 2 826.933751 1651.85295 67874.49 0.60111 0.00049708 0.10973 9.0743E-05 0.71084 0.00058782 826.934010790416 830.94089990227 60.599 0.54436 60.599 60.34 60.884 0 200 43 7 0 0 0 0.011196 2 30441 30.998 30.998 1 3.5511 2.8898 0 6983300 1776000 5207300 38969 1504 14687 15086 61159;61160 61160 VTAQSIIPGILER 13 0 1 Unmodified _VTAQSIIPGILER_ 0 0 0 I3L2B0;K7EIG1;O75153 I3L2B0 I3L2B0 CLUH Clustered mitochondria protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.9153 2 698.911559 1395.80856 74902.54 1.0519 0.00073519 -0.10689 -7.4707E-05 0.94501 0.00066048 698.912057249498 703.915709663445 110.82 0.32188 110.82 110.62 110.94 0 63 20 5 0 0 0 0.00012053 1 69653 77.062 67.955 1 1.4624 1.5295 0 12976000 5808300 7167900 38970 1321 14688 15087 61161 61161 VTAQSIIPGILER 13 0 1 Unmodified _VTAQSIIPGILER_ 0 0 0 I3L2B0;K7EIG1;O75153 I3L2B0 I3L2B0 CLUH Clustered mitochondria protein homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.9169 2 698.911559 1395.80856 71742.94 0.82612 0.00057738 -0.84221 -0.00058863 -0.016091 -1.1246E-05 699.410782493796 703.91528995996 110.15 0.4663 110.15 109.89 110.36 -7.6294E-06 89 28 6 0 0 0 6.6973E-07 1 70864 111.86 103.15 1 1.5058 1.5071 0 17074000 7337300 9736700 38971 1321 14688 15087 61162 61162 VTAQSIIPGILER 13 0 1 Unmodified _VTAQSIIPGILER_ 0 0 0 I3L2B0;K7EIG1;O75153 I3L2B0 I3L2B0 CLUH Clustered mitochondria protein homolog MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 698.9131 2 698.911559 1395.80856 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.07 1 122.07 121.57 122.57 0 0 0 0 0.022668 1 71848 49.5 30.258 1 38972 1321 14688 15087 61163 61163 VTATDLDEPDTLHTR 15 0 1 Unmodified _VTATDLDEPDTLHTR_ 0 0 0 Q9HB00;Q08554 Q9HB00 Q9HB00 DSC1 Desmocollin-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.9446 3 561.944324 1682.81114 NaN NaN NaN -0.25658 -0.00014418 NaN NaN NaN NaN 51.581 0.36597 51.581 51.356 51.722 0 0 0 0 0.039349 1 28549 21.233 11.037 1 NaN NaN 0 13353000 13353000 0 38973 1693 14689 15088 61164 61164 VTAVIPCFPYAR 12 0 1 Unmodified _VTAVIPCFPYAR_ 0 0 0 Q53FW2;P60891;B1ALA9;B1ALA7;A0A140VK41;P11908;B2R860;D3YTJ7;A6NMS2 Q53FW2;A0A140VK41 Q53FW2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.3721 2 697.368472 1392.72239 71472.41 0.66572 0.00046425 -0.25598 -0.00017851 0.40975 0.00028574 697.869064763272 702.372954612821 105.01 0.68715 105.01 104.62 105.31 0 221 55 7 0 0 0 0.00048732 1 64867 70.256 70.256 1 1.6023 1.661 0 22838000 8384700 14453000 38974 1626;616 14690 15089 61165 61165 VTAVIPCFPYAR 12 0 1 Unmodified _VTAVIPCFPYAR_ 0 0 0 Q53FW2;P60891;B1ALA9;B1ALA7;A0A140VK41;P11908;B2R860;D3YTJ7;A6NMS2 Q53FW2;A0A140VK41 Q53FW2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 697.368 2 697.368472 1392.72239 NaN NaN NaN 0.10393 7.248E-05 NaN NaN NaN NaN 116.54 0.50797 116.54 116.21 116.72 7.6294E-06 0 0 0 0.019847 1 68469 68.016 29.713 1 NaN NaN 0 1480200 1480200 0 38975 1626;616 14690 15089 61166 61166 VTAVIPCFPYAR 12 0 1 Unmodified _VTAVIPCFPYAR_ 0 0 0 Q53FW2;P60891;B1ALA9;B1ALA7;A0A140VK41;P11908;B2R860;D3YTJ7;A6NMS2 Q53FW2;A0A140VK41 Q53FW2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 697.368 2 697.368472 1392.72239 72416.3 0.82021 0.00057199 -0.64746 -0.00045152 0.17274 0.00012047 697.368761125867 702.873360046785 116.3 0.49028 116.3 116.04 116.53 0 72 22 6 0 0 0 0.0061673 1 67454 49.418 45.12 1 0.86933 0.74579 0 2823300 1721200 1102200 38976 1626;616 14690 15089 61167 61167 VTAYTVDVTGR 11 0 1 Unmodified _VTAYTVDVTGR_ 0 0 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.3159 2 591.311677 1180.6088 79073.77 0.74374 0.00043978 -0.85649 -0.00050645 -0.11275 -6.6671E-05 591.311404370959 596.315015855276 54.411 0.54257 54.411 54.106 54.648 0 148 45 4 0 0 0 5.164E-10 2 30985 129.85 102.06 1 1.3425 1.4077 0 22840000 9516500 13324000 38977 1696 14691 15090 61168;61169 61168 VTDAIVLLDR 10 0 1 Unmodified _VTDAIVLLDR_ 0 0 0 A8K5J1;P11172;B5LY71;B5LY69;E9PFD2;B5LY67 A8K5J1 A8K5J1 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.7932 2 557.826963 1113.63937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.26 1 105.26 104.76 105.76 7.6294E-06 0 0 0 0.046242 1 59176 44.863 19.941 1 38978 749 14692 15091 61170 61170 VTDDLVCLVYK 11 1 0 Unmodified _VTDDLVCLVYK_ 0 0 0 P49458;Q8WVW9 P49458 P49458 SRP9 Signal recognition particle 9 kDa protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 666.8519 2 662.844496 1323.67444 71397.8 1.0242 0.00067887 0.37 0.00024525 1.3942 0.00092412 662.843738084715 666.851681345237 102.08 0.66695 102.08 101.92 102.58 0 120 54 4 0 0 0 0.00037601 1 62843 83.358 56.243 1 1.6712 1.6388 0 20646000 8675800 11971000 38979 1582 14693 15092 61171 61171 VTDDLVCLVYK 11 1 0 Unmodified _VTDDLVCLVYK_ 0 0 0 P49458;Q8WVW9 P49458 P49458 SRP9 Signal recognition particle 9 kDa protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 666.8524 2 662.844496 1323.67444 71420.2 0.90092 0.00059717 0.3897 0.00025831 1.2906 0.00085548 662.844719545678 666.8517293363 114.51 0.49174 114.51 114.33 114.82 -7.6294E-06 72 21 4 0 0 0 0.00099342 1 66931 70.908 52.597 1 0.98383 0.78809 0 7331600 3582700 3748900 38980 1582 14693 15092 61172 61172 VTDDLVCLVYK 11 1 0 Unmodified _VTDDLVCLVYK_ 0 0 0 P49458;Q8WVW9 P49458 P49458 SRP9 Signal recognition particle 9 kDa protein MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 662.866 2 662.844496 1323.67444 71756.77 0.70764 0.00046906 0.16036 0.00010629 0.868 0.00057535 662.844714699996 666.8516615418 114.43 0.61252 114.43 114.1 114.71 0 80 25 4 0 0 0 0.053094 1 65876 54.608 34.304 1 1.039 0.84764 0 6014200 2819100 3195100 38981 1582 14693 15092 61173 61173 VTDLLGGLFSK 11 1 0 Unmodified _VTDLLGGLFSK_ 0 0 0 M0QXU7;Q9UPE4;Q53G69;O43615 M0QXU7 M0QXU7 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.8312 2 575.329339 1148.64412 82459.51 0.74049 0.00042603 -0.0083754 -4.8186E-06 0.73211 0.00042121 575.329097102445 579.336489369288 115.56 0.56084 115.56 115.34 115.9 0 140 37 6 0 0 0 8.4595E-06 2 73524 109.42 68.39 1 2.5094 2.6077 0 11454000 3021900 8432200 38982 1351 14694 15093 61174;61175 61175 VTDLLGGLFSK 11 1 0 Unmodified _VTDLLGGLFSK_ 0 0 0 M0QXU7;Q9UPE4;Q53G69;O43615 M0QXU7 M0QXU7 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.3371 2 575.329339 1148.64412 80088.55 0.79865 0.00045948 0.091535 5.2663E-05 0.89018 0.00051215 575.329187382341 579.336419984887 114.96 0.59456 114.96 114.73 115.32 0 129 37 4 0 0 0 0.00032579 2 74820 87.298 53.045 1 2.3154 2.3334 0 16184000 4306700 11877000 38983 1351 14694 15093 61176;61177 61176 VTDLLGGLFSK 11 1 0 Unmodified _VTDLLGGLFSK_ 0 0 0 M0QXU7;Q9UPE4;Q53G69;O43615 M0QXU7 M0QXU7 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.3296 2 575.329339 1148.64412 82391.03 0.47683 0.00027434 0.082897 4.7693E-05 0.55973 0.00032203 575.329340542389 579.336501542425 127.22 0.5202 127.22 126.96 127.48 -7.6294E-06 60 22 4 0 0 0 0.01687 2 76630 45.598 22.169 1 1.6189 1.3532 0 1663900 596690 1067200 38984 1351 14694 15093 61178;61179 61179 VTDLLGGLFSK 11 1 0 Unmodified _VTDLLGGLFSK_ 0 0 0 M0QXU7;Q9UPE4;Q53G69;O43615 M0QXU7 M0QXU7 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.3369 2 575.329339 1148.64412 83001.66 0.49952 0.00028739 -0.13716 -7.8912E-05 0.36236 0.00020847 575.329229630643 579.336464495633 126.96 0.37984 126.96 126.81 127.19 0 55 17 4 0 0 0 0.0076805 2 75581 52.167 28.739 1 1.8759 1.553 0 1657200 508830 1148300 38985 1351 14694 15093 61180;61181 61180 VTDQCLSFFK 10 1 0 Unmodified _VTDQCLSFFK_ 0 0 0 A0A0C4DGG3;B7ZB05;B4DSN4;Q8NHM5 A0A0C4DGG3 A0A0C4DGG3 KDM2B Lysine-specific demethylase 2B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.8032 2 622.802631 1243.59071 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.242 1 84.242 83.742 84.742 0 0 0 0 0.021773 1 51710 53.327 24.928 1 38986 513 14695 15094 61182 61182 VTDQCLSFFK 10 1 0 Unmodified _VTDQCLSFFK_ 0 0 0 A0A0C4DGG3;B7ZB05;B4DSN4;Q8NHM5 A0A0C4DGG3 A0A0C4DGG3 KDM2B Lysine-specific demethylase 2B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.803 2 622.802631 1243.59071 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.269 1 84.269 83.769 84.769 -7.6294E-06 0 0 0 0.015602 1 51730 55.461 26.375 1 38987 513 14695 15094 61183 61183 VTEEIVSSEHDEGLSFSGK 19 1 0 Unmodified _VTEEIVSSEHDEGLSFSGK_ 0 0 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 686.9976 3 683.991891 2048.95384 73778.77 0.43004 0.00029415 0.037218 2.5457E-05 0.46726 0.0003196 683.991983963705 686.99753537925 80.08 0.47704 80.08 79.836 80.313 7.6294E-06 81 28 5 0 0 0 0.045689 1 43244 13.23 3.9467 1 2.2257 1.8249 0 2431100 777350 1653800 38988 1833 14696 15095 61184 61184 VTEELLTDNR 10 0 1 Unmodified _VTEELLTDNR_ 0 0 0 Q9UHB9;B4DVI7;B3KMI9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.3105 2 595.306592 1188.59863 NaN NaN NaN -0.19191 -0.00011424 NaN NaN NaN NaN 48.328 0.29153 48.328 48.226 48.518 0 0 0 0 0.0054583 1 27091 68.657 40.833 1 NaN NaN 0 6050400 0 6050400 38989 2101 14697 15096 61185 61185 VTEGLTDVILYHQPDDK 17 1 0 Unmodified _VTEGLTDVILYHQPDDK_ 0 0 0 Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.0017 3 648.330067 1941.96837 76820.05 0.78047 0.000506 0.11669 7.5654E-05 0.89716 0.00058165 648.330296158748 651.001221821141 90.01 0.47395 90.01 89.749 90.223 0 138 37 5 0 0 0 0.021044 1 54227 21 15.572 1 1.772 1.7391 0 20451000 8802200 11648000 38990 864 14698 15097 61186 61186 VTEGLTDVILYHQPDDK 17 1 0 Unmodified _VTEGLTDVILYHQPDDK_ 0 0 0 Q05CK9;Q59GL1;B2R8Z8;O60506;B7Z645 Q05CK9 Q05CK9 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.0013 3 648.330067 1941.96837 76585.21 0.92475 0.00059955 -0.41423 -0.00026856 0.51052 0.00033099 648.664033679511 651.000954662893 88.974 0.6397 88.974 88.621 89.261 0 112 52 4 0 0 0 0.00051207 1 54751 39.256 33.597 1 1.7935 1.9234 0 21340000 7662100 13678000 38991 864 14698 15097 61187 61187 VTEGLVDVILYHQPDDK 17 1 0 Unmodified _VTEGLVDVILYHQPDDK_ 0 0 0 B2R7W4;O43390;B4DMB1;Q0VGD6;B4DT28 B2R7W4 B2R7W4 HNRNPR;HNRPR Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.6761 3 647.670312 1939.98911 75079.12 0.88679 0.00057435 -0.32685 -0.00021169 0.55994 0.00036266 647.670157666138 650.341027963873 105.34 0.5238 105.34 105.15 105.68 0 131 36 5 0 0 0 0.00013321 2 66898 47.916 47.916 1 0.97185 1.0718 0 43722000 20584000 23137000 38992 855 14699 15098 61188;61189 61188 VTELALTASDR 11 0 1 Unmodified _VTELALTASDR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 593.3229 2 588.31696 1174.61937 77466.97 0.66335 0.00039026 0.34072 0.00020045 1.0041 0.00059071 588.316684775992 593.321712664256 57.933 0.67822 57.933 57.572 58.25 -3.8147E-06 281 53 7 0 0 0 6.3169E-10 2 32713 128.03 99.817 1 0.59273 0.67604 0 120110000 74867000 45240000 38993 1665 14700 15099 61190;61191 61191 VTELALTASDR 11 0 1 Unmodified _VTELALTASDR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3234 2 588.31696 1174.61937 77154.7 0.65274 0.00038402 0.29064 0.00017099 0.94338 0.00055501 588.316499863974 593.321922803751 57.015 0.70538 57.015 56.634 57.339 0 269 52 7 0 0 0 1.3012E-16 2 32853 151.83 119.47 1 0.5958 0.67847 0 108040000 66951000 41085000 38994 1665 14700 15099 61192;61193 61193 VTELFMDNK 9 1 0 Oxidation (M) _VTELFM(ox)DNK_ VTELFM(1)DNK VTELFM(89.7)DNK 0 1 0 P52732;B2RAM6 P52732 P52732 KIF11 Kinesin-like protein KIF11;Kinesin-like protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 560.7761 2 556.768257 1111.52196 NaN NaN NaN 0.80474 0.00044805 NaN NaN NaN NaN 48.215 0.55917 48.215 47.935 48.494 0 0 0 0 0.00024635 2 26246 89.698 62.736 1 NaN NaN 0 10519000 0 10519000 38995 1602 14701 15100 61194;61195 61195 1388 VTESIEDIK 9 1 0 Unmodified _VTESIEDIK_ 0 0 0 Q5VZL5;H7C1I7 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 521.2806 2 517.274229 1032.53391 88496.73 0.41011 0.00021214 -0.45372 -0.0002347 -0.043614 -2.256E-05 517.273633289412 521.281233427922 53.885 0.72387 53.885 53.607 54.331 -3.8147E-06 137 57 4 0 0 0 0.026156 1 26882 47.574 19.356 1 1.7367 1.4559 0 1868600 753420 1115200 38996 1835 14702 15101 61196 61196 VTFALPDDAETEDTGVLNVK 20 1 0 Unmodified _VTFALPDDAETEDTGVLNVK_ 0 0 0 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1067.5326 2 1067.53115 2133.04774 59129 0.74255 0.0007927 0.49059 0.00052372 1.2331 0.0013164 1068.03214429557 1072.04110646757 112.12 0.56204 112.12 111.83 112.39 0 208 40 8 0 0 0 0.00018188 1 70576 49.298 49.298 1 0.91187 1.003 0 54620000 28474000 26145000 38997 924 14703 15102 61197 61197 VTFALPDDAETEDTGVLNVK 20 1 0 Unmodified _VTFALPDDAETEDTGVLNVK_ 0 0 0 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1068.0326 2 1067.53115 2133.04774 58995.79 0.60355 0.00064431 0.77643 0.00082887 1.38 0.0014732 1068.0322938385 1071.54095646769 111.63 0.66052 111.63 111.38 112.04 0 210 44 9 0 0 0 3.2792E-07 2 71981 109.84 109.84 1 0.88478 0.99231 0 54956000 28880000 26075000 38998 924 14703 15102 61198;61199 61199 VTFALPDDAETEDTGVLNVK 20 1 0 Unmodified _VTFALPDDAETEDTGVLNVK_ 0 0 0 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1071.541 2 1067.53115 2133.04774 57858.38 0.42083 0.00044925 0.038923 4.1551E-05 0.45976 0.0004908 1067.5311028248 1072.03961878361 123.17 0.64113 123.17 122.99 123.63 0 158 27 9 0 0 0 0.0037165 1 73512 43.184 43.184 1 1.2079 0.94334 0 16097000 7965400 8131800 38999 924 14703 15102 61200 61200 VTFALPDDAETEDTGVLNVK 20 1 0 Unmodified _VTFALPDDAETEDTGVLNVK_ 0 0 0 B3KPV5;O00566;U3KQ48 B3KPV5 B3KPV5 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1068.0333 2 1067.53115 2133.04774 57730.34 0.34337 0.00036656 0.26762 0.00028569 0.61099 0.00065225 1067.531591776 1071.53965679336 123.09 0.67188 123.09 122.84 123.51 0 193 30 10 0 0 0 0.0010977 2 72650 41.967 41.967 1 1.3874 1.1295 0 25461000 11298000 14163000 39000 924 14703 15102 61201;61202 61202 VTFEADENENITVVK 15 1 0 Unmodified _VTFEADENENITVVK_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4;F8WD73 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 854.4257 2 854.425424 1706.8363 66372.59 0.87805 0.00075023 -0.1693 -0.00014465 0.70876 0.00060558 854.926620805741 858.432309680533 80.52 0.8322 80.52 80.22 81.052 7.6294E-06 400 71 8 0 0 0 2.6006E-05 2 47767 86.911 86.911 1 1.1961 1.3191 0 56116000 25519000 30596000 39001 664 14704 15103 61203;61204 61204 VTFEADENENITVVK 15 1 0 Unmodified _VTFEADENENITVVK_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4;F8WD73 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 858.9339 2 854.425424 1706.8363 66349.49 0.63775 0.00054491 0.45202 0.00038622 1.0898 0.00093113 854.927039179065 858.433377845659 92.48 0.6393 92.48 92.232 92.871 0 124 32 7 0 0 0 0.01339 1 51440 33.782 31.803 1 2.0799 1.6411 0 4084300 1551100 2533200 39002 664 14704 15103 61205 61205 VTFEADENENITVVK 15 1 0 Unmodified _VTFEADENENITVVK_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4;F8WD73 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 858.4337 2 854.425424 1706.8363 66406.26 0.40127 0.00034285 0.28138 0.00024042 0.68265 0.00058327 854.424988412806 858.433045328266 92.358 0.66957 92.358 92.089 92.758 -7.6294E-06 126 34 6 0 0 0 0.014712 1 50507 33.273 30.145 1 2.1793 1.7279 0 3992800 1240200 2752700 39003 664 14704 15103 61206 61206 VTFQFSYGTK 10 1 0 Unmodified _VTFQFSYGTK_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 593.3057 2 589.298039 1176.58152 NaN NaN NaN -0.035374 -2.0846E-05 NaN NaN NaN NaN 78.728 0.63533 78.728 78.493 79.128 7.6294E-06 0 0 0 0.0030464 1 47671 78.098 66.329 1 NaN NaN 0 34032000 0 34032000 39004 2147 14705 15104 61207 61207 VTFSGLR 7 0 1 Unmodified _VTFSGLR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 390.2243 2 390.224146 778.433738 NaN NaN NaN 0.24618 9.6065E-05 NaN NaN NaN NaN 51.095 0.33581 51.095 50.943 51.279 0 0 0 0 0.020113 1 28221 99.384 24.667 1 NaN NaN 0 5636900 5636900 0 39005 397;1622 14706 15105 61208 61208 VTFSGLR 7 0 1 Unmodified _VTFSGLR_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 390.2242 2 390.224146 778.433738 NaN NaN NaN -0.47144 -0.00018397 NaN NaN NaN NaN 49.814 0.34796 49.814 49.655 50.003 0 0 0 0 0.005335 1 28052 114.02 21.33 1 NaN NaN 0 5490500 5490500 0 39006 397;1622 14706 15105 61209 61209 VTFSLLDQSDPGLAK 15 1 0 Unmodified _VTFSLLDQSDPGLAK_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;Q2KJU6;Q2KJU3 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.4323 2 795.92232 1589.83009 71026.16 0.98238 0.0007819 0.63034 0.0005017 1.6127 0.0012836 796.424455649241 799.929407491576 105.83 0.50718 105.83 105.55 106.05 0 107 38 5 0 0 0 0.00022474 1 67292 71.085 56.209 1 0.92639 0.96006 0 9817200 4993300 4823900 39007 11 14707 15106 61210 61210 VTFSLLDQSDPGLAK 15 1 0 Unmodified _VTFSLLDQSDPGLAK_ 0 0 0 A0A024QZ59;Q9BUZ4;A0A024QZ19;Q2KJU6;Q2KJU3 A0A024QZ59 A0A024QZ59 TRAF4 TNF receptor-associated factor 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 799.9319 2 795.92232 1589.83009 68263.71 0.87505 0.00069647 0.21736 0.00017301 1.0924 0.00086947 796.42280647426 799.929669999164 117.76 0.40585 117.76 117.55 117.96 0 60 17 5 0 0 0 0.037232 1 69431 24.599 1.7206 1 1.4532 1.192 0 2426000 917550 1508500 39008 11 14707 15106 61211 61211 VTFVNFTVTR 10 0 1 Unmodified _VTFVNFTVTR_ 0 0 0 Q14204;H0YJ21 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.3214 2 592.327131 1182.63971 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.235 1 95.235 94.735 95.735 0 0 0 0 0.00032313 1 57895 76.143 44.721 1 39009 1729 14708 15107 61212 61212 VTFVNFTVTR 10 0 1 Unmodified _VTFVNFTVTR_ 0 0 0 Q14204;H0YJ21 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.3334 2 592.327131 1182.63971 NaN NaN NaN 0.88115 0.00052193 NaN NaN NaN NaN 94.41 0.50735 94.41 94.294 94.801 0 0 0 0 0.0086658 2 58627 64.711 41.283 1 NaN NaN 0 6735100 0 6735100 39010 1729 14708 15107 61213;61214 61214 VTGCLIVCIER 11 0 1 Unmodified _VTGCLIVCIER_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.3506 2 660.34414 1318.67373 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.575 1 86.575 86.075 87.075 0 0 0 0 0.027542 1 53366 50.108 32.877 1 39011 1398 14709 15108 61215 61215 VTGCLIVCIER 11 0 1 Unmodified _VTGCLIVCIER_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.345 2 660.34414 1318.67373 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.12 1 100.12 99.616 100.62 -7.6294E-06 0 0 0 0.028885 1 56666 49.5 32.475 1 39012 1398 14709 15108 61216 61216 VTGCLIVCIER 11 0 1 Unmodified _VTGCLIVCIER_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 660.3434 2 660.34414 1318.67373 NaN NaN NaN -0.54235 -0.00035814 NaN NaN NaN NaN 100.06 0.42424 100.06 99.861 100.29 0 0 0 0 0.049859 1 55687 44.309 28.647 1 NaN NaN 0 1930800 1930800 0 39013 1398 14709 15108 61217 61217 VTGCLIVCIER 11 0 1 Unmodified _VTGCLIVCIER_ 0 0 0 O60832;C9IYT0;U5UA77;H7C0M1;U5U7S7;H7C2Q9 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.3488 2 660.34414 1318.67373 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.07 1 100.07 99.568 100.57 0 0 0 0 0.019637 1 55741 53.683 31.597 1 39014 1398 14709 15108 61218 61218 VTGEADVEFATHEDAVAAMSK 21 1 0 Oxidation (M) _VTGEADVEFATHEDAVAAM(ox)SK_ VTGEADVEFATHEDAVAAM(1)SK VTGEADVEFATHEDAVAAM(74.36)SK 0 1 0 E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51 E9PCY7 E9PCY7 HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.6757 3 732.003802 2192.98958 70138.02 0.57097 0.00041795 0.24741 0.0001811 0.81838 0.00059906 732.004334109229 734.67542792806 64.304 0.96989 64.304 63.947 64.917 0 506 84 9 0 0 0 8.6473E-09 2 37040 74.364 61.292 1 2.8941 3.2801 0 97411000 22964000 74447000 39015 1231 14710 15109 61219;61220 61220 947 VTGEADVEFATHEDAVAAMSK 21 1 0 Oxidation (M) _VTGEADVEFATHEDAVAAM(ox)SK_ VTGEADVEFATHEDAVAAM(1)SK VTGEADVEFATHEDAVAAM(105.06)SK 0 1 0 E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51 E9PCY7 E9PCY7 HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.01 3 732.003802 2192.98958 69529.23 0.48332 0.00035379 0.080136 5.866E-05 0.56346 0.00041245 732.338664574084 734.675305003708 62.88 0.93208 62.88 62.61 63.543 -3.8147E-06 525 80 9 0 0 0 4.8992E-16 3 36814 105.06 88.472 1 3.091 3.4568 0 108080000 26767000 81317000 39016 1231 14710 15109 61221;61222;61223 61221 947 VTGEADVEFATHEDAVAAMSK 21 1 0 Unmodified _VTGEADVEFATHEDAVAAMSK_ 0 0 0 E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51 E9PCY7 E9PCY7 HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.0071 3 726.672164 2176.99466 72749.2 0.68219 0.00049573 -0.70954 -0.0005156 -0.027349 -1.9874E-05 727.005456594136 729.677896349247 66.555 0.66039 66.555 66.111 66.772 7.6294E-06 188 53 6 0 0 0 0.0055524 1 39423 23.215 0 1 1.4206 1.4702 0 24885000 9782700 15103000 39017 1231 14710 15110 61224 61224 VTGEADVEFATHEDAVAAMSK 21 1 0 Unmodified _VTGEADVEFATHEDAVAAMSK_ 0 0 0 E9PCY7;G8JLB6;P31943;H0YB39;H0YBG7;Q68DG4;H0YBD7;B4DP51 E9PCY7 E9PCY7 HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.0038 3 726.672164 2176.99466 NaN NaN NaN -0.46967 -0.0003413 NaN NaN NaN NaN 78.259 0.39252 78.259 78.068 78.46 0 0 0 0 0.033262 1 41139 23.658 0 1 NaN NaN 0 970760 970760 0 39018 1231 14710 15110 61225 61225 VTGEADVEFATHEEAVAAMSK 21 1 0 Oxidation (M) _VTGEADVEFATHEEAVAAM(ox)SK_ VTGEADVEFATHEEAVAAM(1)SK VTGEADVEFATHEEAVAAM(100.19)SK 0 1 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 739.346 3 736.675686 2207.00523 71146.9 0.5138 0.0003785 -0.10168 -7.4906E-05 0.41212 0.0003036 737.009747968172 739.681364627558 70.083 1.1045 70.083 69.662 70.766 0 425 97 8 0 0 0 8.0348E-16 2 40608 100.19 100.19 1 2.4701 2.6642 0 37430000 12191000 25239000 39019 234 14711 15111 61226;61227 61226 174 VTGEADVEFATHEEAVAAMSK 21 1 0 Oxidation (M) _VTGEADVEFATHEEAVAAM(ox)SK_ VTGEADVEFATHEEAVAAM(1)SK VTGEADVEFATHEEAVAAM(70.7)SK 0 1 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 737.0112 3 736.675686 2207.00523 70950.04 0.73558 0.00054189 -0.18132 -0.00013358 0.55426 0.00040831 737.009914787191 739.681340516074 68.962 0.93394 68.962 68.476 69.41 0 347 80 9 0 0 0 1.8054E-08 2 41055 70.699 70.699 1 2.6245 2.9416 0 54640000 13815000 40825000 39020 234 14711 15111 61228;61229 61229 174 VTGEADVEFATHEEAVAAMSK 21 1 0 Oxidation (M) _VTGEADVEFATHEEAVAAM(ox)SK_ VTGEADVEFATHEEAVAAM(1)SK VTGEADVEFATHEEAVAAM(111.66)SK 0 1 0 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 A0A024R7T3 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 739.3483 3 736.675686 2207.00523 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.605 1 68.605 68.105 69.105 0 0 0 0 8.2225E-20 1 40781 111.66 95.716 1 39021 234 14711 15111 61230 61230 174 VTGELAFDTSSADVR 15 0 1 Unmodified _VTGELAFDTSSADVR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.3831 2 784.383559 1566.75257 68120.26 0.74679 0.00058577 -0.25791 -0.0002023 0.48888 0.00038347 784.383192306838 789.387459428737 76.548 0.65819 76.548 76.239 76.897 0 282 54 8 0 0 0 9.6427E-09 4 45061 112.5 95.828 1 0.96379 1.0693 0 68142000 33948000 34194000 39022 1887 14712 15112 61231;61232;61233;61234 61232 VTGELAFDTSSADVR 15 0 1 Unmodified _VTGELAFDTSSADVR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.3878 2 784.383559 1566.75257 68893.07 0.61734 0.00048423 -0.137 -0.00010746 0.48034 0.00037677 784.383257469917 789.387598155813 75.607 0.60497 75.607 75.331 75.936 0 301 53 8 0 0 0 4.8342E-48 2 45588 186.58 176.13 1 1.018 1.1824 0 63755000 32514000 31241000 39023 1887 14712 15112 61235;61236 61236 VTGELAFDTSSADVR 15 0 1 Unmodified _VTGELAFDTSSADVR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.3886 2 784.383559 1566.75257 NaN NaN NaN -0.071785 -5.6307E-05 NaN NaN NaN NaN 87.502 0.80437 87.502 87.218 88.023 7.6294E-06 0 0 0 5.4567E-05 1 48044 81.92 71.915 1 NaN NaN 0 9103700 0 9103700 39024 1887 14712 15112 61237 61237 VTGELAFDTSSADVR 15 0 1 Unmodified _VTGELAFDTSSADVR_ 0 0 0 Q86XI2;B3KRQ2;Q9NXD3;H0Y6U5 Q86XI2 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 789.3885 2 784.383559 1566.75257 69017.7 0.60139 0.00047172 -0.041941 -3.2898E-05 0.55945 0.00043882 784.383622944867 789.387625631147 87.683 0.92448 87.683 87.341 88.265 0 275 54 9 0 0 0 0.00042336 2 47268 57.802 53.784 1 2.0101 1.6468 0 13459000 4096200 9362700 39025 1887 14712 15112 61238;61239 61238 VTGQCCEEWVCDEDSIKDPMEDQDGLLGK 29 2 0 Oxidation (M) _VTGQCCEEWVCDEDSIKDPM(ox)EDQDGLLGK_ VTGQCCEEWVCDEDSIKDPM(1)EDQDGLLGK VTGQCCEEWVCDEDSIKDPM(51.22)EDQDGLLGK 0 1 1 B4DI61;Q6FI18;O00622;Q53FA4;Q9UID7 B4DI61 B4DI61 CYR61 Protein CYR61 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1149.4893 3 1143.81237 3428.41527 NaN NaN NaN 0.053215 6.0868E-05 NaN NaN NaN NaN 89.182 0.22794 89.182 89.12 89.348 0 0 0 0 7.608E-07 1 55045 51.22 50.628 1 NaN NaN 0 18631000 0 18631000 39026 979 14713 15113 61240 61240 782 VTGQFPWSSLR 11 0 1 Unmodified _VTGQFPWSSLR_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.3359 2 639.335487 1276.65642 77752.84 0.70871 0.0004531 -0.13362 -8.5425E-05 0.57509 0.00036768 639.335288964541 644.339859503158 96.999 0.86977 96.999 96.577 97.447 0 248 75 4 0 0 0 0.0014602 1 59078 67.334 47.547 1 0.77298 0.7965 0 24539000 13957000 10582000 39027 2147 14714 15114 61241 61241 VTGQFPWSSLR 11 0 1 Unmodified _VTGQFPWSSLR_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.3406 2 639.335487 1276.65642 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.881 1 95.881 95.381 96.381 0 0 0 0 1.3784E-05 1 59746 92.538 57.314 1 39028 2147 14714 15114 61242 61242 VTGQFPWSSLR 11 0 1 Unmodified _VTGQFPWSSLR_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 644.3401 2 639.335487 1276.65642 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.8 1 109.8 109.3 110.3 -7.6294E-06 0 0 0 0.027134 1 62422 50.292 29.391 1 39029 2147 14714 15114 61243 61243 VTGVPLSYLLSR 12 0 1 Unmodified _VTGVPLSYLLSR_ 0 0 0 M0QZR8;Q59FA0;A0A024R4F4;M0R2B7;P28340;Q308M6;M0QZB4 M0QZR8 M0QZR8 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 652.8837 2 652.88227 1303.74999 76538.8 0.86703 0.00056607 0.11699 7.6382E-05 0.98402 0.00064245 652.882228341797 657.886638556811 115.17 0.44129 115.17 114.92 115.36 -7.6294E-06 105 28 5 0 0 0 0.0056947 1 73191 50.292 40.061 1 0.79623 0.79451 0 8078600 4733200 3345400 39030 155 14715 15115 61244 61244 VTGVPLSYLLSR 12 0 1 Unmodified _VTGVPLSYLLSR_ 0 0 0 M0QZR8;Q59FA0;A0A024R4F4;M0R2B7;P28340;Q308M6;M0QZB4 M0QZR8 M0QZR8 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3394 2 652.88227 1303.74999 78393.25 0.81787 0.00053397 -0.080531 -5.2577E-05 0.73734 0.0004814 652.882293256513 657.886632028362 114.57 0.49072 114.57 114.27 114.76 0 112 31 6 0 0 0 0.048031 1 74524 52.725 52.725 1 0.67859 0.67412 0 7353200 4050100 3303100 39031 155 14715 15115 61245 61245 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 647.401 3 644.394454 1930.16153 74275.75 0.4885 0.00031479 -0.069712 -4.4922E-05 0.41879 0.00026987 644.728790293009 647.066037805369 129.24 1.2625 129.24 128.73 129.99 -1.5259E-05 483 86 7 0 0 0 1.2707E-30 4 84023 110.37 110.37 1 0.72496 0.81528 0 71148000 43643000 27504000 39032 312 14716 15116 61246;61247;61248;61249 61246 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.5901 2 966.088043 1930.16153 60822.46 0.42422 0.00040983 0.12379 0.00011959 0.54801 0.00052943 966.589689028498 970.095350562216 130.13 0.75612 130.13 129.99 130.75 0 358 46 10 0 0 0 8.5779E-78 2 85005 193 193 1 0.71652 0.84495 0 341140000 161220000 179930000 39033 312 14716 15116 61250;61251 61250 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.5887 2 966.088043 1930.16153 60515.12 -0.10522 -0.00010165 -0.80754 -0.00078015 -0.91275 -0.0008818 966.589471685888 970.595920644576 133.77 0.48189 133.77 133.59 134.07 0 94 19 8 0 0 0 6.9642E-64 2 87774 176.99 176.99 1 0.76249 0.78368 0 17488000 9737000 7751300 39034 312 14716 15116 61252;61253 61252 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.587 2 966.088043 1930.16153 62338.13 -0.061185 -5.911E-05 -0.14469 -0.00013978 -0.20588 -0.00019889 966.589511353922 970.595809220529 135.38 0.34038 135.38 135.26 135.6 0 124 33 6 0 0 0 0.0077417 1 88446 28.806 28.806 1 0.68359 0.69841 0 4391700 2476900 1914800 39035 312 14716 15116 61254 61254 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.5937 2 966.088043 1930.16153 60842.79 -0.016495 -1.5935E-05 -0.070991 -6.8583E-05 -0.087486 -8.4519E-05 966.589417920246 970.0951885466 137.09 0.71129 137.09 136.71 137.42 0 229 72 6 0 0 0 2.7205E-05 1 88997 57.802 57.802 1 0.68694 0.69672 0 5976900 2889400 3087400 39036 312 14716 15116 61255 61255 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.5969 2 966.088043 1930.16153 60549.77 -0.0029068 -2.8082E-06 0.2776 0.00026819 0.2747 0.00026538 966.589612309442 970.596847909901 137.69 0.47298 137.69 137.42 137.89 0 254 46 7 0 0 0 3.5974E-05 2 89312 52.928 52.928 1 0.75306 0.76285 0 5783500 3682500 2101000 39037 312 14716 15116 61256;61257 61257 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.5895 2 966.088043 1930.16153 60965.57 0.012872 1.2436E-05 -0.099747 -9.6364E-05 -0.086875 -8.3928E-05 966.589597766028 970.596458023228 138.27 0.77301 138.27 137.82 138.59 0 487 83 9 0 0 0 1.8935E-30 2 89558 146.36 146.36 1 0.73145 0.74307 0 13707000 7818800 5888700 39038 312 14716 15116 61258;61259 61258 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.59 2 966.088043 1930.16153 60535.5 0.055971 5.4073E-05 0.26811 0.00025902 0.32408 0.00031309 966.589744259426 970.59684252503 139.52 3.6042 139.52 138.53 142.13 0 1366 402 6 0 0 0 7.0262E-51 6 89870 166.04 166.04 1 0.6955 0.6836 0 20117000 11128000 8988600 39039 312 14716 15116 61260;61261;61262;61263;61264;61265 61262 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.0956 2 966.088043 1930.16153 59409.43 0.28984 0.00028001 -0.14859 -0.00014355 0.14125 0.00013646 966.589263777292 970.095113826461 142.7 3.6488 142.7 141.46 145.11 0 1476 387 11 0 0 0 5.1791E-64 6 90687 179.93 179.93 1 0.73264 0.82873 0 148420000 83131000 65286000 39040 312 14716 15116 61266;61267;61268;61269;61270;61271 61269 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.5897 2 966.088043 1930.16153 61540.3 0.3829 0.00036991 -0.093719 -9.0541E-05 0.28918 0.00027937 966.589388971857 970.095053569251 143.29 1.9678 143.29 143.11 145.07 0 587 210 3 0 0 0 4.7462E-30 2 90890 140.01 140.01 1 0.72066 0.78342 0 47519000 33036000 14483000 39041 312 14716 15116 61272;61273 61272 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.5974 2 966.088043 1930.16153 59860.73 0.55317 0.00053441 -0.20315 -0.00019626 0.35002 0.00033815 966.589435236362 970.596370895514 145.27 0.74384 145.27 144.86 145.6 0 219 59 7 0 0 0 6.1702E-93 2 91310 207.8 207.8 1 0.36269 0.41066 0 100180000 65916000 34267000 39042 312 14716 15116 61274;61275 61275 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.0951 2 966.088043 1930.16153 NaN NaN NaN -0.31372 -0.00030308 NaN NaN NaN NaN 136.99 0.25302 136.99 136.79 137.04 0 0 0 0 0.0034621 1 89042 44.616 39.232 1 NaN NaN 0 2978400 0 2978400 39043 312 14716 15116 61276 61276 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.5899 2 966.088043 1930.16153 NaN NaN NaN -0.40971 -0.00039581 NaN NaN NaN NaN 149.01 0.47385 149.01 148.87 149.35 0 0 0 0 9.839E-42 2 93018 152.47 142.14 1 NaN NaN 0 8006700 8006700 0 39044 312 14716 15116 61277;61278 61278 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.0952 2 966.088043 1930.16153 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.65 1 134.65 134.15 135.15 0 0 0 0 2.0269E-05 1 88315 69.864 64.479 1 39045 312 14716 15116 61279 61279 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 966.0872 2 966.088043 1930.16153 NaN NaN NaN NaN NaN NaN NaN NaN NaN 136.42 1 136.42 135.92 136.92 0 0 0 0 0.02456 1 88854 40.475 25.914 1 39046 312 14716 15116 61280 61280 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.0955 2 966.088043 1930.16153 NaN NaN NaN NaN NaN NaN NaN NaN NaN 140.72 1 140.72 140.22 141.22 0 0 0 0 3.6497E-40 1 90115 147.24 138.54 1 39047 312 14716 15116 61281 61281 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.5928 2 966.088043 1930.16153 61411.15 0.86481 0.00083548 0.053441 5.1629E-05 0.91825 0.00088711 966.590080990174 970.595741112385 122.96 0.39574 122.96 122.72 123.11 0 52 28 4 0 0 0 0.0063141 1 81626 30.438 30.438 1 0.60451 0.63123 0 10102000 6326400 3775500 39048 312 14716 15116 61282 61282 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.097 2 966.088043 1930.16153 61695.4 0.69501 0.00067144 0.018302 1.7681E-05 0.71331 0.00068912 966.589666730529 970.595824764293 124.15 0.34808 124.15 123.89 124.24 0 51 23 4 0 0 0 0.00039963 1 82408 42.095 42.095 1 0.95815 0.96213 0 6964600 3762300 3202300 39049 312 14716 15116 61283 61283 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.0887 2 966.088043 1930.16153 61628.58 0.7695 0.00074341 0.15015 0.00014506 0.91966 0.00088847 966.58980871587 970.596384422377 125.06 1.4375 125.06 124.24 125.67 0 256 99 4 0 0 0 0.0393 1 82876 22.055 22.055 1 0.77618 0.78391 0 8348100 4512500 3835600 39050 312 14716 15116 61284 61284 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.0865 2 966.088043 1930.16153 61481.22 0.65057 0.00062851 -0.32604 -0.00031498 0.32453 0.00031352 966.589671129841 970.09426598518 125.8 0.24893 125.8 125.66 125.91 7.6294E-06 70 15 6 0 0 0 0.00030862 1 83789 43.991 43.991 1 0.6796 0.70458 0 11273000 5628500 5644200 39051 312 14716 15116 61285 61285 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.0657 3 644.394454 1930.16153 74303.94 0.52306 0.00033706 -0.31083 -0.0002003 0.21223 0.00013676 644.728535040123 647.399900113272 128.58 1.23 128.58 128.32 129.55 0 452 95 6 0 0 0 1.4391E-30 4 85854 94.71 94.71 1 0.75145 0.84675 0 59857000 23679000 36178000 39052 312 14716 15116 61286;61287;61288;61289 61286 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.5941 2 966.088043 1930.16153 62684.16 0.41826 0.00040407 -0.10483 -0.00010128 0.31342 0.0003028 966.589575994734 970.596422431184 136.55 0.19148 136.55 136.49 136.68 0 42 20 5 0 0 0 0.0030425 1 90908 34.179 34.179 1 0.91297 1.0086 0 2298800 1593600 705120 39053 312 14716 15116 61290 61290 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.5976 2 966.088043 1930.16153 60240.12 0.40343 0.00038975 -0.62198 -0.00060088 -0.21854 -0.00021113 966.589483638499 970.596268196135 136.96 0.49759 136.96 136.64 137.14 0 172 54 6 0 0 0 1.1914E-05 1 90940 71.176 71.176 1 0.73247 0.77817 0 4083400 2103300 1980100 39054 312 14716 15116 61291 61291 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.0877 2 966.088043 1930.16153 60718.68 0.40321 0.00038953 -0.33302 -0.00032173 0.07018 6.78E-05 966.589092902336 970.596477894628 137.69 0.66525 137.69 137.27 137.93 -1.5259E-05 356 71 7 0 0 0 3.2787E-05 1 91120 54.7 54.7 1 0.70653 0.70555 0 6566900 4039200 2527700 39055 312 14716 15116 61292 61292 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.5895 2 966.088043 1930.16153 59559.98 0.3901 0.00037687 -0.29295 -0.00028301 0.097152 9.3858E-05 966.589224669382 970.596541307304 138.29 0.7804 138.29 137.82 138.6 0 419 87 8 0 0 0 4.8672E-78 2 91316 196.5 196.5 1 0.77049 0.78548 0 12178000 7195400 4982900 39056 312 14716 15116 61293;61294 61293 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.5972 2 966.088043 1930.16153 59357.64 0.37028 0.00035773 -0.089822 -8.6776E-05 0.28046 0.00027095 966.589360797487 970.095135140354 139.75 3.7574 139.75 138.4 142.16 0 2143 424 8 0 0 0 1.3953E-64 9 91453 186.16 186.16 1 0.73434 0.75992 0 18611000 11814000 6797900 39057 312 14716 15116 61295;61296;61297;61298;61299;61300;61301;61302;61303 61296 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.0884 2 966.088043 1930.16153 59021.48 0.35083 0.00033893 -0.065241 -6.3029E-05 0.28559 0.00027591 966.589402965942 970.596755990014 141.95 0.35225 141.95 141.8 142.16 0 216 39 7 0 0 0 8.5188E-40 1 92008 157.56 157.56 1 0.71698 0.72297 0 7682400 5011700 2670700 39058 312 14716 15116 61304 61304 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.0955 2 966.088043 1930.16153 59239.82 0.12866 0.00012429 -0.0096614 -9.3338E-06 0.119 0.00011496 966.589333269938 970.596512460967 142.65 2.7092 142.65 142.11 144.82 0 2183 299 11 0 0 0 7.2602E-78 5 92227 194.24 194.24 1 0.72879 0.83455 0 162830000 94056000 68775000 39059 312 14716 15116 61305;61306;61307;61308;61309 61306 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 966.0883 2 966.088043 1930.16153 NaN NaN NaN -1.0834 -0.0010467 NaN NaN NaN NaN 122.1 0.35767 122.1 121.82 122.18 0 0 0 0 0.020587 1 80943 36.303 25.693 1 NaN NaN 0 2173700 2173700 0 39060 312 14716 15116 61310 61310 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.0968 2 966.088043 1930.16153 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.74 1 124.74 124.24 125.24 0 0 0 0 0.046855 1 83021 35.006 29.622 1 39061 312 14716 15116 61311 61311 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.0958 2 966.088043 1930.16153 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.62 1 125.62 125.12 126.12 0 0 0 0 0.00010356 1 83707 66.267 54.629 1 39062 312 14716 15116 61312 61312 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.0953 2 966.088043 1930.16153 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.73 1 132.73 132.23 133.23 0 0 0 0 1.9909E-06 1 88963 81.92 75.948 1 39063 312 14716 15116 61313 61313 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.0869 2 966.088043 1930.16153 61546.98 0.17253 0.00016668 0.025833 2.4957E-05 0.19836 0.00019163 966.589467904765 970.596696715532 136.55 0.9382 136.55 136.18 137.12 1.5259E-05 657 104 10 0 0 0 3.343E-05 2 83610 54.343 54.343 1 0.85895 0.69834 0 29259000 15608000 13651000 39064 312 14716 15116 61314;61315 61315 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.088 2 966.088043 1930.16153 61435.46 0.18159 0.00017543 0.101 9.7571E-05 0.28259 0.000273 966.589632534814 970.095294291718 137.19 0.20633 137.19 137.12 137.33 0 137 23 7 0 0 0 2.3622E-08 2 83765 95.417 95.417 1 0.77346 0.61082 0 5273000 2627600 2645400 39065 312 14716 15116 61316;61317 61317 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.5891 2 966.088043 1930.16153 61107.61 0.16528 0.00015967 0.20729 0.00020026 0.37257 0.00035993 966.589519258085 970.596805243251 137.99 0.34094 137.99 137.77 138.12 1.5259E-05 198 38 7 0 0 0 4.2283E-06 2 83885 81.494 81.494 1 0.85052 0.66979 0 5717900 2521700 3196200 39066 312 14716 15116 61318;61319 61319 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 970.0953 2 966.088043 1930.16153 61491.17 0.19469 0.00018808 0.036984 3.573E-05 0.23167 0.00022381 966.58953696728 970.095197034754 138.64 0.43445 138.64 138.35 138.79 0 300 45 8 0 0 0 1.7768E-17 2 84011 123.95 123.95 1 0.82651 0.65289 0 10656000 5746600 4909500 39067 312 14716 15116 61320;61321 61320 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.0898 2 966.088043 1930.16153 61435.5 0.20839 0.00020132 0.69337 0.00066985 0.90176 0.00087118 966.089394530007 970.096449189956 139.56 0.18759 139.56 139.43 139.62 0 109 21 7 0 0 0 0.052934 1 84183 20.953 20.953 1 0.84147 0.69781 0 2293600 1329700 963870 39068 312 14716 15116 61322 61322 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 970.0946 2 966.088043 1930.16153 61435.47 0.1989 0.00019216 0.2394 0.00023128 0.4383 0.00042343 966.589718174868 970.596902659269 139.89 0.58835 139.89 139.62 140.21 0 324 67 9 0 0 0 0.00048945 2 84298 40.224 40.224 1 0.86251 0.69005 0 7129300 3672700 3456600 39069 312 14716 15116 61323;61324 61324 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.5903 2 966.088043 1930.16153 61326.73 0.21297 0.00020574 -0.21677 -0.00020942 -0.003808 -3.6789E-06 966.08816670521 970.095458320534 140.31 0.19127 140.31 140.16 140.35 0 87 22 6 0 0 0 0.060007 1 84311 20.381 20.381 1 0.96842 0.75593 0 3272600 1521500 1751100 39070 312 14716 15116 61325 61325 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.0881 2 966.088043 1930.16153 61326.76 0.2215 0.00021399 0.23858 0.00023049 0.46008 0.00044448 966.589678569071 970.596861992512 141.05 0.47626 141.05 140.79 141.27 0 258 53 7 0 0 0 2.6671E-05 1 84438 58.098 58.098 1 0.88367 0.70748 0 8600200 4444800 4155400 39071 312 14716 15116 61326 61326 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.0883 2 966.088043 1930.16153 61326.75 0.2201 0.00021264 0.095823 9.2573E-05 0.31592 0.00030521 966.589532512457 970.095196318646 141.68 0.25304 141.68 141.6 141.85 0 219 27 9 0 0 0 1.281E-05 2 84582 70.089 70.089 1 0.85472 0.68457 0 7310100 3875000 3435000 39072 312 14716 15116 61327;61328 61328 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.59 2 966.088043 1930.16153 61326.74 0.22507 0.00021744 -0.073311 -7.0825E-05 0.15176 0.00014661 966.087801995625 970.09509701066 142.41 0.3011 142.41 142.22 142.52 0 259 33 9 0 0 0 2.3515E-06 2 84708 84.169 84.169 1 0.86799 0.69697 0 7979900 4253300 3726600 39073 312 14716 15116 61329;61330 61330 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 970.5964 2 966.088043 1930.16153 61326.75 0.23459 0.00022663 0.052113 5.0346E-05 0.2867 0.00027698 966.589521415987 970.095227509596 143.22 0.18433 143.22 143.15 143.34 1.5259E-05 149 19 9 0 0 0 2.6434E-64 2 84844 184.11 184.11 1 0.84044 0.6713 0 9141900 4937300 4204600 39074 312 14716 15116 61331;61332 61331 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 970.5964 2 966.088043 1930.16153 61326.75 0.23685 0.00022882 0.094728 9.1516E-05 0.33158 0.00032034 966.088023945677 970.596620805453 143.7 0.74176 143.7 143.51 144.26 0 458 78 9 0 0 0 1.9236E-05 1 85064 62.298 62.298 1 0.84587 0.67891 0 8068000 4321800 3746200 39075 312 14716 15116 61333 61333 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.5897 2 966.088043 1930.16153 61326.75 0.24625 0.0002379 0.091976 8.8857E-05 0.33823 0.00032676 966.589556767251 970.596690831011 144.06 0.26697 144.06 143.99 144.26 0 109 28 5 0 0 0 4.5912E-23 1 85093 135.58 135.58 1 0.79658 0.61791 0 3509800 2347800 1162000 39076 312 14716 15116 61334 61334 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 970.5966 2 966.088043 1930.16153 61280.17 0.2428 0.00023457 -0.024268 -2.3445E-05 0.21853 0.00021112 966.087892780751 970.095096104516 144.46 0.31213 144.46 144.39 144.7 0 204 34 7 0 0 0 0.0095735 1 85215 26.711 26.711 1 0.87784 0.71927 0 2460000 1318300 1141700 39077 312 14716 15116 61335 61335 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.5906 2 966.088043 1930.16153 61280.18 0.23899 0.00023089 0.16063 0.00015519 0.39963 0.00038607 966.589708486229 970.09543159477 144.89 0.53238 144.89 144.69 145.23 0 220 58 7 0 0 0 0.0031551 1 85231 34.05 34.05 1 0.88739 0.74959 0 1536600 775920 760640 39078 312 14716 15116 61336 61336 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 966.5891 2 966.088043 1930.16153 61326.76 0.25257 0.00024401 0.19975 0.00019298 0.45233 0.00043699 966.088303771423 970.09545813071 145.75 0.5887 145.75 145.4 145.99 0 153 51 5 0 0 0 0.057487 1 85442 20.585 20.585 1 0.87193 0.68982 0 4163100 2029100 2134000 39079 312 14716 15116 61337 61337 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 970.5952 2 966.088043 1930.16153 NaN NaN NaN -3.5771 -0.0034558 NaN NaN NaN NaN 134.82 1.5796 134.82 134.66 136.24 0 0 0 0 7.5047E-81 2 82510 188.09 174.89 1 NaN NaN 0 12037000000 0 12037000000 39080 312 14716 15116 61338;61339 61338 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.5901 2 966.088043 1930.16153 61252.26 0.42311 0.00040876 0.41777 0.00040361 0.84088 0.00081236 966.589908701963 970.095502726983 135.16 1.2679 135.16 134.95 136.22 -1.5259E-05 330 65 8 0 0 0 1.4735E-16 2 82353 113.99 113.99 1 0.82202 0.70103 0 94523000 49279000 45244000 39081 312 14716 15116 61340;61341 61341 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.5897 2 966.088043 1930.16153 61152.37 0.41066 0.00039673 -0.15886 -0.00015347 0.2518 0.00024326 966.589271876177 970.596506302029 136.54 1.1024 136.54 136.1 137.21 0 539 122 9 0 0 0 1.2163E-22 2 82734 131.69 131.69 1 0.85407 0.70631 0 32620000 17414000 15205000 39082 312 14716 15116 61342;61343 61342 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.5968 2 966.088043 1930.16153 61059.94 0.40342 0.00038974 -0.079989 -7.7277E-05 0.32343 0.00031246 966.087864487454 970.596602295585 137.5 0.48021 137.5 137.39 137.87 1.5259E-05 352 54 8 0 0 0 1.4735E-16 1 83019 113.99 113.99 1 0.80223 0.66174 0 11073000 6116400 4957100 39083 312 14716 15116 61344 61344 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.088 2 966.088043 1930.16153 61059.93 0.40213 0.0003885 -0.21015 -0.00020303 0.19198 0.00018547 966.589374902607 970.094957438524 138.01 0.28403 138.01 137.77 138.05 0 161 31 8 0 0 0 1.2968E-06 1 83043 85.672 85.672 1 0.79388 0.65437 0 10828000 6373400 4455100 39084 312 14716 15116 61345 61345 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.5896 2 966.088043 1930.16153 60967.77 0.39363 0.00038028 -0.22502 -0.00021739 0.16861 0.00016289 966.589288783136 970.094945204499 138.64 0.60223 138.64 138.27 138.87 0 347 66 9 0 0 0 1.267E-16 2 83199 115.57 115.57 1 0.85529 0.68637 0 18344000 9745800 8598400 39085 312 14716 15116 61346;61347 61347 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.0956 2 966.088043 1930.16153 61059.94 0.3891 0.0003759 0.023797 2.299E-05 0.4129 0.00039889 966.088078098019 970.596581818918 139.24 0.49277 139.24 138.99 139.49 0 322 54 10 0 0 0 3.2026E-08 1 83334 93.766 93.766 1 0.82381 0.67411 0 26772000 14864000 11907000 39086 312 14716 15116 61348 61348 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.5975 2 966.088043 1930.16153 61643.58 0.38257 0.0003696 -0.10865 -0.00010496 0.27393 0.00026464 966.58925125824 970.094963314809 139.85 0.77267 139.85 139.46 140.23 0 545 88 9 0 0 0 9.6417E-23 4 83468 132.99 132.99 1 0.81694 0.66645 0 7864500 4239600 3624900 39087 312 14716 15116 61349;61350;61351;61352 61350 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.0956 2 966.088043 1930.16153 61129.92 0.37614 0.00036338 0.012008 1.1601E-05 0.38815 0.00037498 966.589358021917 970.5966446583 140.78 0.73474 140.78 140.21 140.94 0 394 83 9 0 0 0 3.7141E-17 1 83619 122.46 122.46 1 0.82005 0.67101 0 12582000 7054900 5527500 39088 312 14716 15116 61353 61353 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.5906 2 966.088043 1930.16153 61129.92 0.37429 0.00036159 0.018141 1.7526E-05 0.39243 0.00037912 966.58945531806 970.095185952341 140.99 0.15479 140.99 140.9 141.05 0 92 11 9 0 0 0 3.343E-05 1 83638 54.343 54.343 1 0.83885 0.6908 0 10532000 5631300 4900900 39089 312 14716 15116 61354 61354 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.0954 2 966.088043 1930.16153 61129.91 0.3681 0.00035562 -0.1247 -0.00012047 0.2434 0.00023515 966.589365384776 970.596429700186 141.63 0.23763 141.63 141.5 141.74 0 219 25 9 0 0 0 1.681E-08 1 83768 96.756 96.756 1 0.87561 0.7233 0 11562000 5987200 5574800 39090 312 14716 15116 61355 61355 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.5898 2 966.088043 1930.16153 61129.91 0.36653 0.0003541 -0.16497 -0.00015937 0.20156 0.00019472 966.087825282894 970.59644263015 141.79 0.27979 141.79 141.73 142.01 0 251 30 9 0 0 0 2.1619E-22 1 83788 126.83 126.83 1 0.81917 0.67462 0 10542000 5757800 4784100 39091 312 14716 15116 61356 61356 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.5898 2 966.088043 1930.16153 61129.92 0.36117 0.00034892 -0.035357 -3.4158E-05 0.32581 0.00031476 966.589477377005 970.596543021199 142.72 0.5127 142.72 142.27 142.78 0 290 56 9 0 0 0 2.4789E-52 1 83932 175.48 175.48 1 0.83945 0.67776 0 13563000 7678400 5884300 39092 312 14716 15116 61357 61357 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.5903 2 966.088043 1930.16153 61129.92 0.35538 0.00034333 -0.027782 -2.684E-05 0.3276 0.00031649 966.589476444866 970.596526498004 143.18 0.43739 143.18 142.93 143.37 0 278 45 9 0 0 0 0.036016 1 84109 22.321 22.321 1 0.85867 0.69814 0 13041000 6948500 6093000 39093 312 14716 15116 61358 61358 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.5966 2 966.088043 1930.16153 61129.92 0.35007 0.0003382 0.027781 2.6838E-05 0.37785 0.00036504 966.58951623801 970.596597852606 143.69 0.48729 143.69 143.62 144.1 0 289 47 9 0 0 0 6.2257E-17 1 84311 120.53 120.53 1 0.85288 0.7028 0 10739000 5770200 4968900 39094 312 14716 15116 61359 61359 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.5894 2 966.088043 1930.16153 61069.28 0.34891 0.00033708 0.0065679 6.3452E-06 0.35548 0.00034342 966.088016098798 970.59644521941 144.02 0.14116 144.02 143.94 144.09 0 95 13 8 0 0 0 0.0075928 1 84343 28.976 28.976 1 0.85157 0.69752 0 5408900 3186200 2222700 39095 312 14716 15116 61360 61360 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.5907 2 966.088043 1930.16153 62778.37 0.33978 0.00032825 0.24177 0.00023357 0.58155 0.00056183 966.589549923343 970.095419866278 147.03 0.17169 147.03 146.97 147.15 0 54 17 5 0 0 0 0.00029059 1 85077 44.367 44.367 1 0.7129 0.61277 0 578650 339080 239570 39096 312 14716 15116 61361 61361 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.5901 2 966.088043 1930.16153 NaN NaN NaN -0.42874 -0.0004142 NaN NaN NaN NaN 137.24 0.091309 137.24 137.21 137.3 0 0 0 0 1.7762E-06 1 82896 76.073 66.021 1 NaN NaN 0 3505900 3505900 0 39097 312 14716 15116 61362 61362 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.0952 2 966.088043 1930.16153 NaN NaN NaN 0.03343 3.2296E-05 NaN NaN NaN NaN 142.4 0.20764 142.4 142.27 142.48 0 0 0 0 3.3624E-18 1 83911 117.27 114.23 1 NaN NaN 0 4054600 0 4054600 39098 312 14716 15116 61363 61363 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 970.0951 2 966.088043 1930.16153 NaN NaN NaN 0.011782 1.1383E-05 NaN NaN NaN NaN 143.08 0.29529 143.08 142.87 143.17 0 0 0 0 2.1717E-06 1 84082 75.102 69.823 1 NaN NaN 0 5528400 0 5528400 39099 312 14716 15116 61364 61364 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 966.0886 2 966.088043 1930.16153 NaN NaN NaN NaN NaN NaN NaN NaN NaN 140.28 1 140.28 139.78 140.78 0 0 0 0 7.5077E-10 1 83499 96.756 79.544 1 39100 312 14716 15116 61365 61365 VTIDPENNLISIWNNGK 17 1 0 Unmodified _VTIDPENNLISIWNNGK_ 0 0 0 P11388;J3KTB7 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 968.0071 2 963.999622 1925.98469 59961.46 0.70135 0.0006761 -0.71422 -0.0006885 -0.012864 -1.2401E-05 964.499444599311 968.006519349747 117.78 1.1638 117.78 117.24 118.41 0 559 74 12 0 0 0 1.3122E-68 7 77262 193.81 185.51 1 0.67471 0.79331 0 366380000 211720000 154670000 39101 1471 14717 15117 61366;61367;61368;61369;61370;61371;61372 61367 VTILGHVQR 9 0 1 Unmodified _VTILGHVQR_ 0 0 0 Q01813;B1APP6;V9GY25 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8777 3 341.541697 1021.60326 102068.2 0.15881 5.4241E-05 0.12328 4.2105E-05 0.28209 9.6347E-05 341.541681722427 344.877692494353 37.419 0.60918 37.419 37.19 37.799 0 176 50 6 0 0 0 0.016037 2 18953 37.191 37.191 1 1.9339 2.0738 0 46237000 13340000 32897000 39102 1677 14718 15118 61373;61374 61373 VTILGHVQR 9 0 1 Unmodified _VTILGHVQR_ 0 0 0 Q01813;B1APP6;V9GY25 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8777 3 341.541697 1021.60326 102718 0.058765 2.0071E-05 -0.28 -9.5632E-05 -0.22124 -7.5561E-05 341.541561843669 344.877650464998 35.911 0.56685 35.911 35.702 36.269 0 207 45 6 0 0 0 0.03096 1 18320 30.564 15.897 1 2.1206 2.4667 0 60152000 15173000 44979000 39103 1677 14718 15118 61375 61375 VTIMPKDIQLAR 12 1 1 Oxidation (M) _VTIM(ox)PKDIQLAR_ VTIM(1)PKDIQLAR VTIM(52.07)PKDIQLAR 0 1 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;A8K4Y7;Q6NXT2;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.6101 3 467.602517 1399.78572 87802.63 0.26017 0.00012166 -0.052857 -2.4716E-05 0.20731 9.694E-05 467.60244866854 473.60999653178 64.203 1.2415 64.203 63.584 64.825 0 442 113 5 0 0 0 0.0012531 2 36758 52.071 48.494 1 0.94812 1.1238 0 41603000 20409000 21194000 39104 827;1661;1865 14719 15119 61376;61377 61376 655 VTIMPKDIQLAR 12 1 1 Unmodified _VTIMPKDIQLAR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;A8K4Y7;Q6NXT2;P68431;Q71DI3 K7EK07;P68431;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.271 3 462.270878 1383.79081 96895.55 -0.01663 -7.6875E-06 0.067632 3.1264E-05 0.051003 2.3577E-05 462.270835554973 468.278433545853 76.601 0.28483 76.601 76.462 76.747 0 52 18 4 0 0 0 0.03248 1 46327 29.303 29.303 1 0.74928 0.82747 0 6888800 4137100 2751800 39105 827;1661;1865 14719 15120 61378 61378 VTITQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTITQGGVLPNIQAVLLPK_ 0 0 0 B2R5B6 B2R5B6 B2R5B6 Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 985.6028 2 981.093325 1960.1721 61638.02 0.61025 0.00059872 0.15488 0.00015195 0.76513 0.00075067 981.595505507363 985.60157259395 128.73 0.67436 128.73 128.12 128.79 0 157 44 8 0 0 0 0.0012007 1 83900 36.284 36.284 1 0.82641 0.93673 0 97133000 53167000 43966000 39106 832 14720 15121 61379 61379 VTITQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTITQGGVLPNIQAVLLPK_ 0 0 0 B2R5B6 B2R5B6 B2R5B6 Histone H2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 985.6024 2 981.093325 1960.1721 60710.38 0.34077 0.00033432 -0.67292 -0.0006602 -0.33216 -0.00032588 981.594231977624 985.600459514581 128.34 0.78238 128.34 127.84 128.62 0 172 53 11 0 0 0 4.8869E-06 2 85720 80.555 80.555 1 0.85753 0.95845 0 98718000 48151000 50567000 39107 832 14720 15121 61380;61381 61381 VTITQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTITQGGVLPNIQAVLLPK_ 0 0 0 B2R5B6 B2R5B6 B2R5B6 Histone H2A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.0935 2 981.093325 1960.1721 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.63 1 128.63 128.13 129.13 0 0 0 0 0.0002144 1 85961 61.48 39.607 1 39108 832 14720 15121 61382 61382 VTIYENLDVTNEFHTANLSTK 21 1 0 Unmodified _VTIYENLDVTNEFHTANLSTK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.7421 3 803.735933 2408.18597 67484.85 0.61362 0.00049319 0.23697 0.00019046 0.85059 0.00068365 804.070915846196 806.407868907829 113.3 0.39193 113.3 113.1 113.5 0 73 18 6 0 0 0 0.0011541 1 65076 29.476 29.476 1 1.5099 1.2313 0 6492700 2450400 4042400 39109 1795 14721 15122 61383 61383 VTLATLK 7 1 0 Unmodified _VTLATLK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;V9HVU7;A0A024RAP1;E5RI98 A0A0S2Z4G7;E5RI98 A0A0S2Z4G7 NPM1;CLEC2D Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 377.2516 2 373.244547 744.47454 95886.16 -0.17975 -6.7091E-05 0.21991 8.208E-05 0.040159 1.4989E-05 373.244593421193 377.251640982119 50.3 1.1269 50.3 49.882 51.009 0 471 106 8 0 0 0 0.026881 2 27595 81.784 24.142 1 1.2747 1.5284 0 997890000 414590000 583300000 39110 559;1213 14722 15123 61384;61385 61385 VTLATLK 7 1 0 Unmodified _VTLATLK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;V9HVU7;A0A024RAP1;E5RI98 A0A0S2Z4G7;E5RI98 A0A0S2Z4G7 NPM1;CLEC2D Nucleophosmin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 377.2517 2 373.244547 744.47454 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.793 1 50.793 50.293 51.293 0 0 0 0 0.034064 1 28058 72.138 18.584 1 39111 559;1213 14722 15123 61386 61386 VTLATLK 7 1 0 Unmodified _VTLATLK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;V9HVU7;A0A024RAP1;E5RI98 A0A0S2Z4G7;E5RI98 A0A0S2Z4G7 NPM1;CLEC2D Nucleophosmin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 377.2517 2 373.244547 744.47454 96460.38 0.10691 3.9903E-05 -0.22829 -8.5207E-05 -0.12138 -4.5305E-05 373.244552272802 377.251494468252 49.011 1.0183 49.011 48.723 49.742 0 501 84 10 0 0 0 0.028306 3 27938 72.138 18.584 1 1.2277 1.4533 0 2288800000 940190000 1348600000 39112 559;1213 14722 15123 61387;61388;61389 61389 VTLATLK 7 1 0 Unmodified _VTLATLK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;V9HVU7;A0A024RAP1;E5RI98 A0A0S2Z4G7;E5RI98 A0A0S2Z4G7 NPM1;CLEC2D Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 377.2514 2 373.244547 744.47454 96656.99 0.19916 7.4336E-05 -0.021099 -7.8751E-06 0.17806 6.646E-05 373.244495696815 377.251533385282 57.524 1.6652 57.524 57.146 58.811 0 567 125 9 0 0 0 0.051885 1 29019 54.205 15.399 1 0.59598 0.5125 0 88482000 55928000 32554000 39113 559;1213 14722 15123 61390 61390 VTLATLK 7 1 0 Unmodified _VTLATLK_ 0 0 0 A0A0S2Z4G7;A0A0S2Z491;P06748;A0A140VJQ2;A4ZU86;Q9BTI9;V9HVU7;A0A024RAP1;E5RI98 A0A0S2Z4G7;E5RI98 A0A0S2Z4G7 NPM1;CLEC2D Nucleophosmin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 377.2517 2 373.244547 744.47454 97578.89 0.086748 3.2378E-05 -0.058167 -2.1711E-05 0.02858 1.0667E-05 373.244496205195 377.25149942266 57.755 1.5517 57.755 57.352 58.904 0 560 116 8 0 0 0 0.042314 2 28487 58.604 14.545 1 0.57354 0.48805 0 82118000 52414000 29704000 39114 559;1213 14722 15123 61391;61392 61391 VTLDWAK 7 1 0 Unmodified _VTLDWAK_ 0 0 0 B3KTP9;A0A024R4A0;P19338;B3KM80;Q6ZS99;Q9BQ02;H7BY16 B3KTP9 B3KTP9 NCL Nucleolin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 420.7391 2 416.731803 831.449054 93666.95 0.2504 0.00010435 0.50818 0.00021178 0.75859 0.00031613 416.73189754735 420.738967351243 64.188 0.9305 64.188 63.776 64.707 0 337 84 7 0 0 0 0.026774 1 36781 78.616 24.906 1 0.87233 0.98569 0 106170000 57188000 48985000 39115 151 14723 15124 61393 61393 VTLFSDSK 8 1 0 Unmodified _VTLFSDSK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 448.7397 2 448.739825 895.465098 NaN NaN NaN 0.78619 0.0003528 NaN NaN NaN NaN 50.917 0.76084 50.917 50.604 51.365 0 0 0 0 0.0192 1 28087 65.88 15.341 1 NaN NaN 0 30157000 30157000 0 39116 1742 14724 15125 61394 61394 VTLFSDSK 8 1 0 Unmodified _VTLFSDSK_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 448.7396 2 448.739825 895.465098 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.629 1 49.629 49.129 50.129 0 0 0 0 0.0109 1 27948 75.738 32.524 1 39117 1742 14724 15125 61395 61395 VTLGTQPTVLR 11 0 1 Unmodified _VTLGTQPTVLR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 597.8582 2 592.853512 1183.69247 78062.55 0.38095 0.00022585 -0.18823 -0.00011159 0.19273 0.00011426 592.853468321378 597.857439808741 69.75 0.46381 69.75 69.533 69.997 0 231 40 9 0 0 0 1.0742E-17 2 40492 176.38 146.91 1 0.71939 0.85218 0 443330000 264690000 178640000 39118 1770 14725 15126 61396;61397 61396 VTLGTQPTVLR 11 0 1 Unmodified _VTLGTQPTVLR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 597.8583 2 592.853512 1183.69247 78785.06 0.82923 0.00049161 -0.78056 -0.00046276 0.048669 2.8854E-05 592.852929512366 597.857215187649 68.481 0.4576 68.481 68.29 68.748 0 217 37 10 0 0 0 9.8763E-31 2 40648 188.87 154.49 1 0.73576 0.85715 0 451920000 248100000 203830000 39119 1770 14725 15126 61398;61399 61399 VTLGTQPTVLR 11 0 1 Unmodified _VTLGTQPTVLR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.8582 2 592.853512 1183.69247 77843.3 0.41516 0.00024613 0.25696 0.00015234 0.67211 0.00039847 592.853760944585 597.857692685998 79.819 0.76772 79.819 79.507 80.275 7.6294E-06 302 47 9 0 0 0 1.5173E-06 2 42970 116.3 98.792 1 1.203 1.0303 0 40630000 18277000 22353000 39120 1770 14725 15126 61400;61401 61400 VTLGTQPTVLR 11 0 1 Unmodified _VTLGTQPTVLR_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.8576 2 592.853512 1183.69247 78588.08 0.45153 0.00026769 0.083463 4.9481E-05 0.53499 0.00031717 592.853630652666 597.857628914318 79.984 0.8469 79.984 79.661 80.508 0 286 49 8 0 0 0 2.3378E-10 2 42239 147.4 127.26 1 1.2195 1.0638 0 35306000 15704000 19602000 39121 1770 14725 15126 61402;61403 61402 VTLHMITERISK 12 1 1 Oxidation (M) _VTLHM(ox)ITERISK_ VTLHM(1)ITERISK VTLHM(44.75)ITERISK 0 1 1 A0A087WYQ2;A0A0G2JQ19;A0A0G2JNW1 A0A087WYQ2 A0A087WYQ2 C6orf10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.4149 2 722.403044 1442.79153 71234.76 1.0417 0.00075251 -0.13296 -9.6049E-05 0.90871 0.00065646 722.403041134428 731.414186048353 83.911 0.57315 83.911 83.669 84.242 0 253 47 8 0 0 0 0.01085 1 51325 44.753 36.172 1 0.80198 0.94552 0 106960000 61635000 45324000 39122 437 14726 15127 61404 61404 312 VTLILELLQHK 11 1 0 Unmodified _VTLILELLQHK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 438.9461 3 436.274617 1305.80202 92369.23 -0.0070845 -3.0908E-06 -0.198 -8.6381E-05 -0.20508 -8.9472E-05 436.274616237649 438.945818724445 113.67 0.70186 113.67 113.31 114.01 7.6294E-06 187 50 5 0 0 0 0.0072479 1 73664 32.159 31.594 1 0.88468 0.90147 0 12249000 7060300 5188900 39123 897 14727 15128 61405 61405 VTLLEGDHVR 10 0 1 Unmodified _VTLLEGDHVR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 383.5491 3 380.212017 1137.61422 NaN NaN NaN -0.11242 -4.2742E-05 NaN NaN NaN NaN 42.663 0.70185 42.663 42.523 43.225 0 0 0 0 0.020803 1 22696 42.21 31.945 1 NaN NaN 0 15611000 0 15611000 39124 42 14728 15129 61406 61406 VTLLEGDHVR 10 0 1 Unmodified _VTLLEGDHVR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.8177 2 569.814387 1137.61422 NaN NaN NaN -2.4666 -0.0014055 NaN NaN NaN NaN 42.654 0.30724 42.654 42.523 42.83 0 0 0 0 0.008091 1 22753 65.305 32.465 1 NaN NaN 0 6040200 0 6040200 39125 42 14728 15129 61407 61407 VTLLEGDHVR 10 0 1 Unmodified _VTLLEGDHVR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 383.5485 3 380.212017 1137.61422 97948.41 0.23427 8.9074E-05 0.32103 0.00012206 0.55531 0.00021113 380.212392751583 383.548047855748 41.805 0.78784 41.805 41.436 42.224 0 225 70 5 0 0 0 0.0087432 1 22417 36.671 26.666 1 2.0419 2.266 0 42852000 13909000 28943000 39126 42 14728 15129 61408 61408 VTLLEGDHVR 10 0 1 Unmodified _VTLLEGDHVR_ 0 0 0 Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q96L66;E9PLT0 Q9GZV0 Q9GZV0 CSDE1;UNR Cold shock domain-containing protein E1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.8188 2 569.814387 1137.61422 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.846 1 41.846 41.346 42.346 0 0 0 0 4.1794E-05 1 22525 88.948 39.53 1 39127 42 14728 15129 61409 61409 VTLTPLK 7 1 0 Unmodified _VTLTPLK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 386.2533 2 386.252372 770.49019 97215.92 0.23903 9.2327E-05 0.45672 0.00017641 0.69576 0.00026874 386.252490450538 390.25954110131 54.24 0.39408 54.24 54.082 54.476 -3.8147E-06 84 31 5 0 0 0 0.027069 1 30430 86.866 10.02 1 0.88615 0.86817 0 21603000 11933000 9670400 39128 1680 14729 15130 61410 61410 VTLTPLK 7 1 0 Unmodified _VTLTPLK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 386.2522 2 386.252372 770.49019 96933.48 0.074725 2.8863E-05 0.37872 0.00014628 0.45344 0.00017514 386.252398915314 390.259521249454 52.796 0.4085 52.796 52.687 53.095 3.8147E-06 97 33 5 0 0 0 0.028572 1 30154 71.715 8.5672 1 1.0173 1.0335 0 30032000 13773000 16259000 39129 1680 14729 15130 61411 61411 VTLTPLK 7 1 0 Unmodified _VTLTPLK_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 390.2596 2 386.252372 770.49019 97142.15 0.11999 4.6347E-05 -0.0088402 -3.4145E-06 0.11115 4.2932E-05 386.252321047686 390.259348061464 62.056 0.3755 62.056 61.924 62.299 -3.8147E-06 88 30 6 0 0 0 0.03421 1 31827 62.717 9.1629 1 2.2608 1.7901 0 3026700 879250 2147500 39130 1680 14729 15130 61412 61412 VTLVFEHVDQDLR 13 0 1 Unmodified _VTLVFEHVDQDLR_ 0 0 0 F8VZZ0;F8VZ51;Q6LC83;A0A024RBB6;P11802;F8VXD2;F8VYH9;F8VTV8;F8VWX7;F8W1L8 F8VZZ0 F8VZZ0 CDK4 Cyclin-dependent kinase 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.6174 3 524.278979 1569.81511 NaN NaN NaN 1.3549 0.00071034 NaN NaN NaN NaN 86.763 0.39299 86.763 86.573 86.966 7.6294E-06 0 0 0 0.0012869 1 53439 62.042 49.487 1 NaN NaN 0 9259100 0 9259100 39131 331 14730 15131 61413 61413 VTLVQTLEIQR 11 0 1 Unmodified _VTLVQTLEIQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.39 2 650.385177 1298.7558 76898.13 1.005 0.00065361 0.59868 0.00038937 1.6036 0.001043 650.385391949534 655.389950597981 93.852 0.62791 93.852 93.467 94.095 0 209 56 5 0 0 0 4.5423E-08 2 56847 118.18 118.18 1 1.3348 1.3976 0 39105000 16734000 22370000 39132 1754 14731 15132 61414;61415 61415 VTLVQTLEIQR 11 0 1 Unmodified _VTLVQTLEIQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.39 2 650.385177 1298.7558 76462.96 0.88365 0.00057471 0.079887 5.1957E-05 0.96353 0.00062667 650.384609545146 655.389892773721 92.958 0.56618 92.958 92.677 93.244 0 163 47 5 0 0 0 5.9987E-17 2 57611 157.96 155.42 1 1.326 1.4355 0 27313000 10453000 16861000 39133 1754 14731 15132 61416;61417 61417 VTLVQTLEIQR 11 0 1 Unmodified _VTLVQTLEIQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.389 2 650.385177 1298.7558 76340.1 0.85844 0.00055831 -0.37463 -0.00024365 0.48381 0.00031466 650.886506516306 655.388847701536 107.28 0.46756 107.28 107.06 107.53 -7.6294E-06 73 28 5 0 0 0 0.00099342 1 61370 70.908 70.908 1 2.6358 2.2424 0 2850400 424640 2425800 39134 1754 14731 15132 61418 61418 VTLVQTLEIQR 11 0 1 Unmodified _VTLVQTLEIQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 655.3901 2 650.385177 1298.7558 76794.75 0.66294 0.00043117 -0.17754 -0.00011547 0.4854 0.0003157 650.384886799533 655.38898707223 107.13 0.54648 107.13 106.86 107.41 0 97 34 5 0 0 0 0.023921 1 60335 42.001 42.001 1 2.7806 2.3644 0 2964200 898650 2065500 39135 1754 14731 15132 61419 61419 VTLVVGASQDIIPQLK 16 1 0 Unmodified _VTLVVGASQDIIPQLK_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964;E7EMS6;E7EUU8;H7BZ45 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.0062 2 840.998362 1679.98217 67733.45 0.98134 0.0008253 -0.19528 -0.00016423 0.78605 0.00066107 840.998381804456 845.005245030871 116.44 0.50479 116.44 116.21 116.72 0 199 34 8 0 0 0 2.8092E-12 2 74237 119.69 119.69 1 1.9938 2.1562 0 42938000 13949000 28989000 39136 601 14732 15133 61420;61421 61420 VTLVVGASQDIIPQLK 16 1 0 Unmodified _VTLVVGASQDIIPQLK_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964;E7EMS6;E7EUU8;H7BZ45 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.0051 2 840.998362 1679.98217 67393.84 0.88917 0.00074779 -0.010268 -8.6352E-06 0.8789 0.00073916 840.998241433568 845.005441879109 115.88 0.5034 115.88 115.68 116.19 -7.6294E-06 203 33 9 0 0 0 1.4592E-12 2 75644 122.39 122.39 1 2.0131 2.2675 0 69191000 20688000 48503000 39137 601 14732 15133 61422;61423 61422 VTLVVGASQDIIPQLK 16 1 0 Unmodified _VTLVVGASQDIIPQLK_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964;E7EMS6;E7EUU8;H7BZ45 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.9997 2 840.998362 1679.98217 67134.78 1.1525 0.00096925 0.33247 0.00027961 1.485 0.0012489 841.500154339487 845.005585207523 128.36 0.43684 128.36 128.11 128.55 0 103 18 8 0 0 0 0.001001 2 77587 47.062 47.062 1 1.1855 0.94686 0 9156800 4036100 5120700 39138 601 14732 15133 61424;61425 61425 VTLVVGASQDIIPQLK 16 1 0 Unmodified _VTLVVGASQDIIPQLK_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964;E7EMS6;E7EUU8;H7BZ45 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.0058 2 840.998362 1679.98217 66567.98 0.79883 0.00067182 0.79488 0.00066849 1.5937 0.0013403 840.998927027067 845.005890355908 128.13 0.41086 128.13 127.96 128.37 0 72 17 9 0 0 0 0.0032483 1 76463 37.426 37.426 1 1.4647 1.1948 0 5954900 2279900 3675000 39139 601 14732 15133 61426 61426 VTLYECHSQGEIR 13 0 1 Unmodified _VTLYECHSQGEIR_ 0 0 0 O75530;B4DVW7;E9PJK2;B4DFK0 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 531.2561 3 531.255957 1590.74604 82589.58 0.75366 0.00040039 -0.34824 -0.000185 0.40542 0.00021538 531.255729081423 534.592027261015 38.756 0.39849 38.756 38.624 39.023 0 166 32 7 0 0 0 3.4514E-05 1 19988 67.234 61.203 1 1.1155 1.156 0 20519000 11533000 8985200 39140 1407 14733 15134 61427 61427 VTLYECHSQGEIR 13 0 1 Unmodified _VTLYECHSQGEIR_ 0 0 0 O75530;B4DVW7;E9PJK2;B4DFK0 O75530 O75530 EED Polycomb protein EED ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.8881 2 796.380297 1590.74604 NaN NaN NaN 0.81025 0.00064527 NaN NaN NaN NaN 38.796 0.1981 38.796 38.67 38.868 0 0 0 0 0.037106 1 19973 41.704 29.128 1 NaN NaN 0 4212200 0 4212200 39141 1407 14733 15134 61428 61428 VTLYECHSQGEIR 13 0 1 Unmodified _VTLYECHSQGEIR_ 0 0 0 O75530;B4DVW7;E9PJK2;B4DFK0 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 534.9269 3 531.255957 1590.74604 83014.69 0.42702 0.00022686 -0.077839 -4.1352E-05 0.34918 0.0001855 531.255971530189 534.592166524624 44.751 0.56571 44.751 44.548 45.114 0 234 43 8 0 0 0 0.00018691 2 21279 61.212 58.503 1 1.6282 1.3908 0 5759200 2218300 3540900 39142 1407 14733 15134 61429;61430 61429 VTLYECHSQGEIR 13 0 1 Unmodified _VTLYECHSQGEIR_ 0 0 0 O75530;B4DVW7;E9PJK2;B4DFK0 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 534.5922 3 531.255957 1590.74604 82175.68 0.72102 0.00038305 -0.32236 -0.00017126 0.39866 0.00021179 531.255668764554 534.591970943946 44.88 0.65757 44.88 44.534 45.192 3.8147E-06 217 49 6 0 0 0 0.051497 1 20817 18.413 18.413 1 1.7129 1.4617 0 3220700 1160600 2060100 39143 1407 14733 15134 61431 61431 VTMENTFVNSLASQIIK 17 1 0 Oxidation (M) _VTM(ox)ENTFVNSLASQIIK_ VTM(1)ENTFVNSLASQIIK VTM(116.84)ENTFVNSLASQIIK 0 1 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.0057 2 955.998233 1909.98191 NaN NaN NaN 0.075825 7.2488E-05 NaN NaN NaN NaN 117.98 0.52647 117.98 117.71 118.23 0 0 0 0 3.0462E-14 1 75549 116.84 109.93 1 NaN NaN 0 25842000 0 25842000 39144 897 14734 15135 61432 61432 717 VTMENTFVNSLASQIIK 17 1 0 Oxidation (M) _VTM(ox)ENTFVNSLASQIIK_ VTM(1)ENTFVNSLASQIIK VTM(70.44)ENTFVNSLASQIIK 0 1 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 960.5071 2 955.998233 1909.98191 62698.21 0.59044 0.00056446 0.034716 3.3188E-05 0.62516 0.00059765 955.998201110596 960.005496767497 117.48 0.52771 117.48 117.24 117.77 -7.6294E-06 191 31 9 0 0 0 3.3757E-05 2 76953 70.438 62.133 1 1.6359 1.7888 0 40509000 15495000 25014000 39145 897 14734 15135 61433;61434 61433 717 VTMINAIPVASLDPIK 16 1 0 Oxidation (M) _VTM(ox)INAIPVASLDPIK_ VTM(1)INAIPVASLDPIK VTM(138.45)INAIPVASLDPIK 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 849.4815 2 849.478948 1696.94334 66562.9 0.70583 0.00059959 -0.061546 -5.2282E-05 0.64428 0.0005473 849.478989829137 853.48601402673 115.43 0.64342 115.43 115.13 115.77 -7.6294E-06 317 44 10 0 0 0 8.5042E-25 2 73330 138.45 138.45 1 0.93836 1.0583 0 77349000 38668000 38681000 39146 2148 14735 15136 61435;61436 61436 1999 VTMINAIPVASLDPIK 16 1 0 Oxidation (M) _VTM(ox)INAIPVASLDPIK_ VTM(1)INAIPVASLDPIK VTM(104.59)INAIPVASLDPIK 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 849.9824 2 849.478948 1696.94334 66475.65 0.9231 0.00078415 -0.28645 -0.00024333 0.63665 0.00054082 849.478821434076 853.485886802718 114.88 0.59978 114.88 114.61 115.21 7.6294E-06 297 38 10 0 0 0 6.8962E-09 1 74669 104.59 104.59 1 0.96012 1.0752 0 82222000 38966000 43257000 39147 2148 14735 15136 61437 61437 1999 VTMINAIPVASLDPIK 16 1 0 Oxidation (M) _VTM(ox)INAIPVASLDPIK_ VTM(1)INAIPVASLDPIK VTM(61.42)INAIPVASLDPIK 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 849.4803 2 849.478948 1696.94334 67044.85 0.66624 0.00056595 0.036014 3.0593E-05 0.70225 0.00059655 849.4790036097 853.485800722115 127.27 0.5954 127.27 126.94 127.54 0 158 25 9 0 0 0 8.088E-05 1 76584 61.423 61.423 1 0.59166 0.46729 0 10675000 7048200 3626700 39148 2148 14735 15136 61438 61438 1999 VTMINAIPVASLDPIK 16 1 0 Oxidation (M) _VTM(ox)INAIPVASLDPIK_ VTM(1)INAIPVASLDPIK VTM(64.22)INAIPVASLDPIK 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 849.981 2 849.478948 1696.94334 66915.56 0.67923 0.00057699 -0.19539 -0.00016598 0.48384 0.00041101 849.980182839171 853.485732608697 127.04 0.54461 127.04 126.79 127.33 0 156 24 8 0 0 0 7.3518E-05 2 75523 64.224 64.224 1 0.5705 0.46873 0 9603100 5881000 3722100 39149 2148 14735 15136 61439;61440 61439 1999 VTMINAIPVASLDPIK 16 1 0 Unmodified _VTMINAIPVASLDPIK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 841.3935 2 841.481491 1680.94843 66333.77 0.74455 0.00062652 -0.096476 -8.1183E-05 0.64807 0.00054534 841.983419253557 845.989866441794 134.6 0.19334 134.6 134.56 134.75 0 14 4 6 0 0 0 0.012411 1 82263 46.481 46.481 1 1.0067 0.78101 0 12825000 6527500 6297200 39150 2148 14735 15137 61441 61441 VTMINAIPVASLDPIK 16 1 0 Unmodified _VTMINAIPVASLDPIK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 845.9912 2 841.481491 1680.94843 65480.35 0.72405 0.00060927 0.11043 9.2922E-05 0.83447 0.00070219 841.481566165459 845.99029603077 134.54 0.23572 134.54 134.47 134.71 0 21 6 7 0 0 0 0.022111 1 81354 27.672 27.672 1 0.94201 0.75667 0 15491000 7511800 7979300 39151 2148 14735 15137 61442 61442 VTMQNLNDR 9 0 1 Unmodified _VTMQNLNDR_ 0 0 0 CON__P02533;P02533;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;Q6ZPD6;CON__Q7Z3Y9;Q7Z3Y9;CON__P08779;P08779;CON__P13645;P13645;CON__P02535-1;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8 CON__P02533;CON__P08779;CON__P13645 CON__P13645 KRT14;KRT26;KRT16;KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.7693 2 545.769123 1089.52369 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.285 1 31.285 30.785 31.785 0 0 0 0 0.0030519 1 15422 76.827 32.478 1 + 39152 1161;1150;1159 14736 15138 61443 61443 VTMQNLNDR 9 0 1 Unmodified _VTMQNLNDR_ 0 0 0 CON__P02533;P02533;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;Q6ZPD6;CON__Q7Z3Y9;Q7Z3Y9;CON__P08779;P08779;CON__P13645;P13645;CON__P02535-1;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8 CON__P02533;CON__P08779;CON__P13645 CON__P13645 KRT14;KRT26;KRT16;KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.7693 2 545.769123 1089.52369 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.366 1 31.366 30.866 31.866 0 0 0 0 0.032362 1 15473 52.255 10.826 1 + 39153 1161;1150;1159 14736 15138 61444 61444 VTMQNLNDR 9 0 1 Unmodified _VTMQNLNDR_ 0 0 0 CON__P02533;P02533;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;Q6ZPD6;CON__Q7Z3Y9;Q7Z3Y9;CON__P08779;P08779;CON__P13645;P13645;CON__P02535-1;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8 CON__P02533;CON__P08779;CON__P13645 CON__P13645 KRT14;KRT26;KRT16;KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.7699 2 545.769123 1089.52369 NaN NaN NaN 0.50486 0.00027554 NaN NaN NaN NaN 30.747 0.66008 30.747 30.341 31.001 0 0 0 0 0.0027333 2 15121 79.906 36.099 1 NaN NaN 0 15538000 15538000 0 + 39154 1161;1150;1159 14736 15138 61445;61446 61446 VTMQNLNDR 9 0 1 Oxidation (M) _VTM(ox)QNLNDR_ VTM(1)QNLNDR VTM(76.06)QNLNDR 0 1 0 CON__P02533;P02533;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;Q6ZPD6;CON__Q7Z3Y9;Q7Z3Y9;CON__P08779;P08779;CON__P13645;P13645;CON__P02535-1;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8 CON__P02533;CON__P08779;CON__P13645 CON__P13645 KRT14;KRT26;KRT16;KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.7665 2 553.76658 1105.51861 NaN NaN NaN 0.14746 8.1658E-05 NaN NaN NaN NaN 35.549 0.58614 35.549 35.37 35.956 0 0 0 0 0.0014339 1 15802 76.064 38.506 1 NaN NaN 0 4936000 4936000 0 + 39155 1161;1150;1159 14736 15139 61447 61447 858 VTMVAWDR 8 0 1 Oxidation (M) _VTM(ox)VAWDR_ VTM(1)VAWDR VTM(51.19)VAWDR 0 1 0 Q8WWQ0;Q6RI45 Q8WWQ0;Q6RI45 Q8WWQ0 PHIP;BRWD3 PH-interacting protein;Bromodomain and WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.249 2 497.244752 992.474951 85701.89 0.26152 0.00013004 1.5265 0.00075906 1.788 0.00088909 497.244676023504 502.248812292143 41.875 0.50968 41.875 41.6 42.11 0 159 40 7 0 0 0 0.015298 1 22168 51.193 37.417 1 1.2593 1.3001 0 20045000 8213800 11831000 39156 1942;1860 14737 15140 61448 61448 1718 VTNEIFR 7 0 1 Unmodified _VTNEIFR_ 0 0 0 D3DS96;Q9NRL2;Q05CW0;Q32ND1 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 444.7437 2 439.74016 877.465767 NaN NaN NaN -0.37875 -0.00016655 NaN NaN NaN NaN 43.458 0.67886 43.458 43.024 43.703 0 0 0 0 0.029404 1 23192 86.866 12.451 1 NaN NaN 0 13423000 0 13423000 39157 1187 14738 15141 61449 61449 VTNEYNESLLYSPEEPK 17 1 0 Unmodified _VTNEYNESLLYSPEEPK_ 0 0 0 Q4G0N4;A0A0C4DGV3;A0A024R048;B7Z8V7 Q4G0N4 Q4G0N4 NADK2;FLJ30596 NAD kinase 2, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1010.4851 2 1006.47838 2010.94222 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.453 1 81.453 80.953 81.953 0 0 0 0 0.00054186 1 49752 59.898 51.987 1 39158 1780 14739 15142 61450 61450 VTNMEVALDK 10 1 0 Oxidation (M) _VTNM(ox)EVALDK_ VTNM(1)EVALDK VTNM(48.28)EVALDK 0 1 0 Q5M9N0 Q5M9N0 Q5M9N0 CCDC158 Coiled-coil domain-containing protein 158 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 572.2945 2 568.286814 1134.55907 80818.65 0.41132 0.00023375 0.12769 7.2563E-05 0.539 0.00030631 568.287060973257 572.294056638283 64.558 0.66104 64.558 64.256 64.917 0 231 58 5 0 0 0 0.007933 1 37105 48.283 36.514 1 1.5002 1.4804 0 25055000 8299300 16755000 39159 1812 14740 15143 61451 61451 1673 VTNVLITPGK 10 1 0 Unmodified _VTNVLITPGK_ 0 0 0 D2SNZ4;Q96HE9 D2SNZ4 D2SNZ4 PRR11 Proline-rich protein 11 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.3183 2 521.318774 1040.623 NaN NaN NaN -0.63009 -0.00032848 NaN NaN NaN NaN 57.437 0.35981 57.437 57.301 57.661 0 0 0 0 0.0057684 1 33267 67.704 35.384 1 NaN NaN 0 3854100 3854100 0 39160 1185 14741 15144 61452 61452 VTPAVVAYSENEEIVGLAAK 20 1 0 Unmodified _VTPAVVAYSENEEIVGLAAK_ 0 0 0 Q0VDF9;B4DYI5;Q6P155;H7C2A1;B0YIZ1 Q0VDF9 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1034.5579 2 1030.54914 2059.08374 61905.91 1.0237 0.001055 0.061182 6.3051E-05 1.0849 0.001118 1031.55235134847 1035.05791927816 108.52 0.31369 108.52 108.43 108.74 7.6294E-06 56 23 5 0 0 0 2.8388E-06 1 67809 64.104 64.104 1 1.4737 1.4915 0 6782100 1934600 4847500 39161 1697 14742 15145 61453 61453 VTPDIEESLLEPENEK 16 1 0 Unmodified _VTPDIEESLLEPENEK_ 0 0 0 Q14151;A0PJ47 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.4621 2 921.454379 1840.8942 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.827 1 97.827 97.327 98.327 -7.6294E-06 0 0 0 0.0076601 1 59722 48.659 30.391 1 39162 1727 14743 15146 61454 61454 VTPDIEESLLEPENEK 16 1 0 Unmodified _VTPDIEESLLEPENEK_ 0 0 0 Q14151;A0PJ47 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.4626 2 921.454379 1840.8942 NaN NaN NaN 0.099436 9.1626E-05 NaN NaN NaN NaN 97.099 0.29708 97.099 96.955 97.252 0 0 0 0 0.013692 1 60568 43.991 35.037 1 NaN NaN 0 3516100 0 3516100 39163 1727 14743 15146 61455 61455 VTPDLKPTEASSSAFR 16 1 1 Unmodified _VTPDLKPTEASSSAFR_ 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.3044 3 569.296698 1704.86826 NaN NaN NaN -0.098153 -5.5878E-05 NaN NaN NaN NaN 55.579 0.40851 55.579 55.403 55.812 0 0 0 0 0.0077109 1 31842 50.653 24.112 1 NaN NaN 0 8031100 0 8031100 39164 135 14744 15147 61456 61456 VTPDLKPTEASSSAFR 16 1 1 Unmodified _VTPDLKPTEASSSAFR_ 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 575.305 3 569.296698 1704.86826 79892.2 0.62416 0.00035533 -0.50389 -0.00028687 0.12026 6.8465E-05 569.29622058951 575.304335994264 66.316 0.58331 66.316 66.026 66.609 0 116 31 6 0 0 0 0.032469 1 34359 20.65 8.5048 1 1.222 1.0639 0 2492000 1100400 1391600 39165 135 14744 15147 61457 61457 VTPEPGAGPTQGLLR 15 0 1 Unmodified _VTPEPGAGPTQGLLR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.9103 2 746.909547 1491.80454 71260.09 0.67089 0.00050109 -0.15796 -0.00011798 0.51293 0.00038311 746.909615087126 751.912907689996 72.068 0.62591 72.068 71.776 72.402 0 257 49 7 0 0 0 0.00022552 1 42014 72.29 72.29 1 0.65583 0.69912 0 43847000 25878000 17969000 39166 229 14745 15148 61458 61458 VTPEPGAGPTQGLLR 15 0 1 Unmodified _VTPEPGAGPTQGLLR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.9105 2 746.909547 1491.80454 71168.43 0.61555 0.00045976 -0.17981 -0.0001343 0.43575 0.00032546 746.909676563969 751.912995827613 70.87 0.59468 70.87 70.589 71.183 0 268 44 8 0 0 0 0.00016251 1 42360 78.692 78.692 1 0.67535 0.78292 0 58020000 34074000 23946000 39167 229 14745 15148 61459 61459 VTPEPGAGPTQGLLR 15 0 1 Unmodified _VTPEPGAGPTQGLLR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.415 2 746.909547 1491.80454 70489.22 0.68281 0.00051 -0.37472 -0.00027988 0.30809 0.00023012 746.909551881242 751.913159597076 82.384 0.75562 82.384 82.047 82.803 0 252 45 8 0 0 0 0.0050739 1 44683 37.426 37.426 1 1.9124 1.6147 0 9585600 3378500 6207100 39168 229 14745 15148 61460 61460 VTPEPGAGPTQGLLR 15 0 1 Unmodified _VTPEPGAGPTQGLLR_ 0 0 0 A0A024R7K7;A0A024R7M6;Q86YP4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 746.9098 2 746.909547 1491.80454 71106.6 0.40534 0.00030276 0.011801 8.814E-06 0.41714 0.00031157 746.909685865249 751.913571829049 82.543 0.71831 82.543 82.21 82.928 -7.6294E-06 238 41 8 0 0 0 0.026782 1 44039 28.624 28.624 1 1.9557 1.6048 0 8774800 3329700 5445100 39169 229 14745 15148 61461 61461 VTPNEGLTVSFPFGK 15 1 0 Unmodified _VTPNEGLTVSFPFGK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 797.4211 2 796.919581 1591.82461 67222.8 0.94377 0.00075211 0.092811 7.3963E-05 1.0366 0.00082607 796.919548307965 800.926766016858 111.09 0.7146 111.09 110.84 111.55 0 304 48 8 0 0 0 1.5961E-05 2 69796 109.24 109.24 1 1.0824 1.2204 0 76384000 37880000 38504000 39170 1741 14746 15149 61462;61463 61462 VTPNEGLTVSFPFGK 15 1 0 Unmodified _VTPNEGLTVSFPFGK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.9207 2 796.919581 1591.82461 66885.7 0.92927 0.00074056 0.070189 5.5935E-05 0.99946 0.00079649 796.919594564746 800.926661982988 110.46 0.71664 110.46 110.22 110.93 0 327 53 8 0 0 0 5.1139E-06 4 71041 110.08 110.08 1 1.1273 1.2599 0 96507000 45873000 50634000 39171 1741 14746 15149 61464;61465;61466;61467 61464 VTPNEGLTVSFPFGK 15 1 0 Unmodified _VTPNEGLTVSFPFGK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 800.9268 2 796.919581 1591.82461 69724.88 0.87687 0.0006988 0.61075 0.00048672 1.4876 0.0011855 796.919864712975 800.926583130019 122.27 0.79551 122.27 122.05 122.85 0 218 38 9 0 0 0 4.9552E-05 2 72849 107.09 107.09 1 1.4371 1.2115 0 55794000 20750000 35044000 39172 1741 14746 15149 61468;61469 61468 VTPNEGLTVSFPFGK 15 1 0 Unmodified _VTPNEGLTVSFPFGK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 800.9274 2 796.919581 1591.82461 68846.58 0.91656 0.00073042 0.5177 0.00041257 1.4343 0.001143 797.420736812527 800.926947663707 122.09 0.86051 122.09 121.86 122.72 0 228 41 9 0 0 0 2.2058E-05 2 71778 103.75 97.779 1 1.4066 1.1965 0 80278000 33399000 46879000 39173 1741 14746 15149 61470;61471 61470 VTQDATPGSALDK 13 1 0 Unmodified _VTQDATPGSALDK_ 0 0 0 Q8N995;A0A024R059;Q01581 Q8N995 Q8N995 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.8375 2 651.830431 1301.64631 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.59 1 29.59 29.09 30.09 0 0 0 0 0.0012909 1 14348 74.962 29.282 1 39174 37 14747 15150 61472 61472 VTQDATPGSALDK 13 1 0 Unmodified _VTQDATPGSALDK_ 0 0 0 Q8N995;A0A024R059;Q01581 Q8N995 Q8N995 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 655.8386 2 651.830431 1301.64631 NaN NaN NaN 0.017714 1.1547E-05 NaN NaN NaN NaN 29.115 0.16911 29.115 29.049 29.218 0 0 0 0 0.0030858 1 14024 66.486 39.813 1 NaN NaN 0 5652200 0 5652200 39175 37 14747 15150 61473 61473 VTQLLPQNVHSHNSISK 17 1 0 Unmodified _VTQLLPQNVHSHNSISK_ 0 0 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.0129 3 634.677913 1901.01191 78864.8 0.36166 0.00022954 -0.028802 -1.828E-05 0.33286 0.00021126 635.012092004294 637.683912406702 37.806 0.33066 37.806 37.615 37.946 0 76 25 5 0 0 0 0.0009992 1 19781 36.112 36.112 1 0.36026 0.35962 0 14428000 11441000 2986400 39176 44 14748 15151 61474 61474 VTQPTGEEPALSNLGLPFSSFDHSK 25 1 0 Unmodified _VTQPTGEEPALSNLGLPFSSFDHSK_ 0 0 0 Q9BSM1 Q9BSM1 Q9BSM1 PCGF1 Polycomb group RING finger protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.108 3 886.773047 2657.29731 66793.8 0.47697 0.00042296 -0.24968 -0.00022141 0.22729 0.00020156 887.106631370052 889.443507122112 113.88 0.37669 113.88 113.71 114.08 0 95 28 6 0 0 0 0.04095 1 73991 11.741 9.518 1 0.46806 0.4772 0 12167000 7598200 4568700 39177 2001 14749 15152 61475 61475 VTQSNFAVGYK 11 1 0 Unmodified _VTQSNFAVGYK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.3214 2 607.31422 1212.61389 77218.67 0.73035 0.00044355 0.043809 2.6606E-05 0.77415 0.00047016 607.31432727089 611.321176503369 48.824 1.2143 48.824 48.299 49.513 3.8147E-06 435 90 10 0 0 0 1.4695E-12 3 26573 144.12 144.12 1 1.666 1.9906 0 798240000 308650000 489590000 39178 639 14750 15153 61476;61477;61478 61478 VTQSNFAVGYK 11 1 0 Unmodified _VTQSNFAVGYK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3226 2 607.31422 1212.61389 77412.1 0.40114 0.00024362 -0.050273 -3.0531E-05 0.35087 0.00021309 607.314386484357 611.321285153724 47.531 0.68357 47.531 47.321 48.005 0 327 47 11 0 0 0 1.0463E-16 2 26335 154.05 145.72 1 1.6876 1.9929 0 1101300000 400120000 701200000 39179 639 14750 15153 61479;61480 61479 VTQSNFAVGYK 11 1 0 Unmodified _VTQSNFAVGYK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 607.3149 2 607.31422 1212.61389 77327.29 0.49417 0.00030012 -0.024848 -1.5091E-05 0.46932 0.00028503 607.314200339401 611.321203100264 56.399 0.97818 56.399 56.096 57.075 0 339 63 9 0 0 0 7.8779E-08 2 28302 112.84 112.84 1 2.1488 1.7978 0 50692000 15589000 35103000 39180 639 14750 15153 61481;61482 61482 VTQSNFAVGYK 11 1 0 Unmodified _VTQSNFAVGYK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 607.3149 2 607.31422 1212.61389 77481.49 0.56891 0.00034551 -0.19667 -0.00011944 0.37224 0.00022607 607.31409520495 611.321108109885 56.873 0.87194 56.873 56.465 57.337 0 366 60 11 0 0 0 1.4269E-05 2 27967 107.15 107.15 1 2.1259 1.7732 0 41651000 13736000 27915000 39181 639 14750 15153 61483;61484 61484 VTSAVEALLSADSASR 16 0 1 Unmodified _VTSAVEALLSADSASR_ 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 794.4185 2 788.912484 1575.81041 NaN NaN NaN 0.11442 9.0267E-05 NaN NaN NaN NaN 100.26 1.0018 100.26 99.896 100.9 0 0 0 0 6.8097E-13 1 63150 114.72 83.124 1 NaN NaN 0 24451000 0 24451000 39182 613 14751 15154 61485 61485 VTSLHNQAFEIEK 13 1 0 Unmodified _VTSLHNQAFEIEK_ 0 0 0 Q8TDY2 Q8TDY2 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 758.3922 2 758.39373 1514.77291 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.456 1 87.456 86.956 87.956 7.6294E-06 0 0 0 0.0087627 1 52775 55.064 9.0672 1 39183 1935 14752 15155 61486 61486 VTSLHNQAFEIEK 13 1 0 Unmodified _VTSLHNQAFEIEK_ 0 0 0 Q8TDY2 Q8TDY2 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 758.3929 2 758.39373 1514.77291 NaN NaN NaN -1.8111 -0.0013735 NaN NaN NaN NaN 94.804 0.44038 94.804 94.69 95.13 0 0 0 0 0.0037402 1 52273 64.04 20.758 1 NaN NaN 0 1671600 1671600 0 39184 1935 14752 15155 61487 61487 VTSLLGAGR 9 0 1 Unmodified _VTSLLGAGR_ 0 0 0 Q9NSI6;A5PLN2 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 442.2658 2 437.261259 872.507966 NaN NaN NaN 0.19247 8.4158E-05 NaN NaN NaN NaN 52.741 0.66985 52.741 52.38 53.05 3.8147E-06 0 0 0 0.04983 1 25526 47.082 27.445 1 NaN NaN 0 1038200 0 1038200 39185 2068 14753 15156 61488 61488 VTSVVFHPSQDLVFSASPDATIR 23 0 1 Unmodified _VTSVVFHPSQDLVFSASPDATIR_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 825.4348 3 825.095573 2472.26489 NaN NaN NaN 1.1735 0.00096827 NaN NaN NaN NaN 107.41 0.89537 107.41 106.93 107.82 7.6294E-06 0 0 0 0.0001709 1 66805 42.041 28.025 1 NaN NaN 0 27232000 27232000 0 39186 2114 14754 15157 61489 61489 VTSVVFHPSQDLVFSASPDATIR 23 0 1 Unmodified _VTSVVFHPSQDLVFSASPDATIR_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 825.429 3 825.095573 2472.26489 NaN NaN NaN 1.8006 0.0014856 NaN NaN NaN NaN 106.72 0.74802 106.72 106.28 107.03 0 0 0 0 6.6677E-14 1 67946 86.557 72.396 1 NaN NaN 0 41084000 41084000 0 39187 2114 14754 15157 61490 61490 VTSVVFHPSQDLVFSASPDATIR 23 0 1 Unmodified _VTSVVFHPSQDLVFSASPDATIR_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 828.7668 3 825.095573 2472.26489 NaN NaN NaN 0.14631 0.00012072 NaN NaN NaN NaN 118.1 0.41402 118.1 117.9 118.31 0 0 0 0 1.9661E-05 1 69649 49.515 44.758 1 NaN NaN 0 8718100 0 8718100 39188 2114 14754 15157 61491 61491 VTSVVFHPSQDLVFSASPDATIR 23 0 1 Unmodified _VTSVVFHPSQDLVFSASPDATIR_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 825.4301 3 825.095573 2472.26489 NaN NaN NaN 2.3796 0.0019634 NaN NaN NaN NaN 118.11 0.38823 118.11 117.9 118.28 0 0 0 0 0.00020574 1 69686 41.904 33.616 1 NaN NaN 0 10133000 10133000 0 39189 2114 14754 15157 61492 61492 VTSVVFHPSQDLVFSASPDATIR 23 0 1 Unmodified _VTSVVFHPSQDLVFSASPDATIR_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 828.7665 3 825.095573 2472.26489 65223.08 0.65161 0.00053764 1.0192 0.00084093 1.6708 0.0013786 825.430409165267 828.76615898637 117.85 0.87489 117.85 117.17 118.04 7.6294E-06 139 41 9 0 0 0 6.6204E-06 2 68575 43.768 43.768 1 0.702 0.59563 0 18820000 9676500 9143300 39190 2114 14754 15157 61493;61494 61493 VTTADPYASGK 11 1 0 Unmodified _VTTADPYASGK_ 0 0 0 S4R3W9;A0A0A0MRF4;B4DIG4;A8K5D5;P49406 S4R3W9 S4R3W9 MRPL19 39S ribosomal protein L19, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 559.2849 2 555.277303 1108.54005 81579.96 0.39812 0.00022106 -1.6237 -0.00090158 -1.2255 -0.00068052 555.277087526939 559.284700967556 27.366 0.48308 27.366 27.161 27.644 0 66 21 5 0 0 0 0.02141 2 10617 43.282 26.506 1 1.0886 0.92362 0 1170200 514370 655840 39191 465 14755 15158 61495;61496 61495 VTTAGTPMGSLSAR 14 0 1 Unmodified _VTTAGTPMGSLSAR_ 0 0 0 REV__Q8WXI7 REV__Q8WXI7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.847 2 674.848101 1347.68165 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.762 1 90.762 90.262 91.262 -7.6294E-06 0 0 0 0.001649 1 56143 70.908 27.466 1 + 39192 2183 14756 15159 61497 61497 VTTINQEIQK 10 1 0 Unmodified _VTTINQEIQK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.3342 2 587.327328 1172.6401 84804.5 0.83257 0.00048899 -0.39962 -0.00023471 0.43295 0.00025428 587.326480694432 591.334147272973 35.864 0.39465 35.864 35.603 35.997 0 157 38 6 0 0 0 0.00015618 1 18059 95.502 64.08 1 0.85325 0.90628 0 31589000 17443000 14146000 39193 264 14757 15160 61498 61498 VTTINQEIQK 10 1 0 Unmodified _VTTINQEIQK_ 0 0 0 A0A024R8Y0;Q9BZD4;E9PQC4 A0A024R8Y0 A0A024R8Y0 CDCA1;NUF2 Kinetochore protein Nuf2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.3345 2 587.327328 1172.6401 80758.41 0.76621 0.00045002 -0.31161 -0.00018302 0.4546 0.000267 587.326929613066 591.334249603934 34.986 0.50927 34.986 34.723 35.232 0 173 43 6 0 0 0 0.00057758 1 17692 84.615 62.085 1 0.90641 0.98346 0 22236000 12495000 9741000 39194 264 14757 15160 61499 61499 VTTVVATLGQGPER 14 0 1 Unmodified _VTTVVATLGQGPER_ 0 0 0 Q68D16;A8MT37;A0A024R0L5;P49840;M0QYV0 Q68D16 Q68D16 DKFZp686D0638;GSK3A Glycogen synthase kinase-3 alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 719.4023 2 714.396273 1426.77799 NaN NaN NaN 0.57164 0.00040838 NaN NaN NaN NaN 67.79 0.23514 67.79 67.68 67.915 0 0 0 0 0.0010152 1 40175 74.611 40.736 1 NaN NaN 0 4009900 0 4009900 39195 51 14758 15161 61500 61500 VTTVVATPGQGPDRPQEVSYTDTK 24 1 1 Unmodified _VTTVVATPGQGPDRPQEVSYTDTK_ 0 0 1 Q6FI27;B5BUC0;P49841 Q6FI27 Q6FI27 GSK3B Glycogen synthase kinase-3 beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 855.7706 3 849.42928 2545.26601 NaN NaN NaN -0.37681 -0.00032008 NaN NaN NaN NaN 59.995 0.10286 59.994 59.928 60.031 -3.8147E-06 0 0 0 1.1722E-08 1 34232 59.814 48.514 1 NaN NaN 0 3378800 0 3378800 39196 1078 14759 15162 61501 61501 VTVCQALR 8 0 1 Unmodified _VTVCQALR_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 473.7596 2 473.760569 945.506586 86986.03 0.12483 5.9138E-05 -0.43911 -0.00020803 -0.31428 -0.0001489 473.760636590696 478.764407532067 40.808 0.40546 40.808 40.599 41.005 0 106 35 4 0 0 0 0.0098294 2 21345 73.637 41.509 1 1.4453 1.5427 0 44355000 16360000 27995000 39197 907 14760 15163 61502;61503 61503 VTVCQALR 8 0 1 Unmodified _VTVCQALR_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.7607 2 473.760569 945.506586 NaN NaN NaN 0.41919 0.0001986 NaN NaN NaN NaN 39.739 0.26765 39.739 39.622 39.89 0 0 0 0 0.0031872 1 21108 100.74 57.618 1 NaN NaN 0 28816000 28816000 0 39198 907 14760 15163 61504 61504 VTVCQALR 8 0 1 Unmodified _VTVCQALR_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.765 2 473.760569 945.506586 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.707 1 39.707 39.207 40.207 3.8147E-06 0 0 0 0.034692 1 21089 60.648 26.852 1 39199 907 14760 15163 61505 61505 VTVCQALR 8 0 1 Unmodified _VTVCQALR_ 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.7647 2 473.760569 945.506586 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.606 1 46.606 46.106 47.106 0 0 0 0 0.038943 1 21948 58.604 21.584 1 39200 907 14760 15163 61506 61506 VTVDDLPNR 9 0 1 Unmodified _VTVDDLPNR_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.776 2 514.772188 1027.52982 84708.59 0.50797 0.00026149 0.014783 7.6097E-06 0.52276 0.0002691 514.772309694979 519.776509799359 43.488 0.44868 43.488 43.247 43.696 0 113 36 5 0 0 0 0.0043738 2 23621 69.423 42.755 1 0.77698 0.83788 0 26165000 14250000 11915000 39201 2002 14761 15164 61507;61508 61508 VTVDTGVIPASEEK 14 1 0 Unmodified _VTVDTGVIPASEEK_ 0 0 0 Q8N5A0;A0A087WUT6;O60841;A0JLR8;Q05CQ1 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.8813 2 722.880121 1443.74569 74255.72 0.29378 0.00021236 -0.048346 -3.4949E-05 0.24543 0.00017742 722.880455023415 726.886687454052 66.412 0.42739 66.412 66.209 66.636 0 110 34 4 0 0 0 3.6418E-06 2 38272 101.93 73.724 1 0.9382 0.96843 0 10969000 5935300 5033700 39202 414 14762 15165 61509;61510 61509 VTVDTGVIPASEEK 14 1 0 Unmodified _VTVDTGVIPASEEK_ 0 0 0 Q8N5A0;A0A087WUT6;O60841;A0JLR8;Q05CQ1 Q8N5A0 Q8N5A0 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 722.8801 2 722.880121 1443.74569 71850.92 0.73848 0.00053383 -0.57644 -0.0004167 0.16203 0.00011713 722.88032583722 726.886237052344 65.432 0.34458 65.432 65.185 65.529 0 114 27 5 0 0 0 7.1736E-10 1 38503 122.7 81.3 1 0.7897 0.78993 0 15441000 8639100 6802300 39203 414 14762 15165 61511 61511 VTVGDAATTAAASSSSVTR 19 0 1 Unmodified _VTVGDAATTAAASSSSVTR_ 0 0 0 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 876.4457 2 876.442137 1750.86972 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.471 1 56.471 55.971 56.971 -3.8147E-06 0 0 0 3.0289E-05 1 32516 69.431 56.031 1 39204 2109 14763 15166 61512 61512 VTVGDAATTAAASSSSVTR 19 0 1 Unmodified _VTVGDAATTAAASSSSVTR_ 0 0 0 Q9ULJ3;Q5H9S0;B4DTN6 Q9ULJ3 Q9ULJ3 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 876.4448 2 876.442137 1750.86972 66255.92 0.16078 0.00014092 0.51657 0.00045274 0.67735 0.00059366 876.442662659586 881.446805805923 67.948 0.57448 67.948 67.699 68.273 -7.6294E-06 199 44 6 0 0 0 0.0067741 1 34611 29.912 29.912 1 1.0092 0.86927 0 2761600 1477600 1284000 39205 2109 14763 15166 61513 61513 VTVLFAGQHIAK 12 1 0 Unmodified _VTVLFAGQHIAK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;F8WE98 P21333 P21333 FLNA Filamin-A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.3846 2 642.377155 1282.73976 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.719 1 63.719 63.219 64.219 3.8147E-06 0 0 0 0.052665 1 37479 42.19 23.928 1 39206 1504 14764 15167 61514 61514 VTVLGHVQR 9 0 1 Unmodified _VTVLGHVQR_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;B4E162;P17858;Q7L2M7 A0A024R0Y5;P17858 A0A024R0Y5 PFKM;PFKL ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.8052 2 504.801083 1007.58761 85804.69 0.81388 0.00041085 -0.22153 -0.00011183 0.59235 0.00029902 504.801007041119 509.805215044221 28.627 0.27217 28.627 28.469 28.742 0 57 15 7 0 0 0 0.00045646 2 13561 98.997 98.997 1 1.7881 1.8407 0 36622000 12481000 24141000 39207 61;1495 14765 15168 61515;61516 61515 VTVLGHVQR 9 0 1 Unmodified _VTVLGHVQR_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;B4E162;P17858;Q7L2M7 A0A024R0Y5;P17858 A0A024R0Y5 PFKM;PFKL ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 336.8697 3 336.869814 1007.58761 101888.6 0.3014 0.00010153 -0.34188 -0.00011517 -0.040476 -1.3635E-05 336.869802486402 340.205844520674 28.647 0.48987 28.647 28.377 28.866 -1.9073E-06 108 29 9 0 0 0 0.0002641 2 13576 93.374 73.612 1 1.9127 2.1444 0 91212000 31579000 59633000 39208 61;1495 14765 15168 61517;61518 61517 VTVLGHVQR 9 0 1 Unmodified _VTVLGHVQR_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;B4E162;P17858;Q7L2M7 A0A024R0Y5;P17858 A0A024R0Y5 PFKM;PFKL ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 336.8696 3 336.869814 1007.58761 103249.3 -0.15619 -5.2617E-05 -0.17676 -5.9544E-05 -0.33295 -0.00011216 336.869806623987 340.205849168286 27.77 0.38297 27.77 27.539 27.922 -1.9073E-06 102 20 9 0 0 0 8.5382E-05 2 12995 103.74 88.11 1 1.9221 2.1966 0 89583000 30853000 58730000 39209 61;1495 14765 15168 61519;61520 61520 VTVLGHVQR 9 0 1 Unmodified _VTVLGHVQR_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;B4E162;P17858;Q7L2M7 A0A024R0Y5;P17858 A0A024R0Y5 PFKM;PFKL ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.8049 2 504.801083 1007.58761 NaN NaN NaN -0.9652 -0.00048723 NaN NaN NaN NaN 27.776 0.33123 27.776 27.576 27.907 0 0 0 0 0.00011162 2 13014 98.997 71.743 1 NaN NaN 0 21273000 0 21273000 39210 61;1495 14765 15168 61521;61522 61522 VTVLGHVQR 9 0 1 Unmodified _VTVLGHVQR_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;B4E162;P17858;Q7L2M7 A0A024R0Y5;P17858 A0A024R0Y5 PFKM;PFKL ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.8055 2 504.801083 1007.58761 85894.8 0.13638 6.8845E-05 0.11939 6.0269E-05 0.25577 0.00012911 504.801025473707 509.805296559565 32.31 0.27503 32.31 32.178 32.453 0 44 12 5 0 0 0 0.010956 1 13893 58.815 58.815 1 1.1283 0.99102 0 1809900 876710 933170 39211 61;1495 14765 15168 61523 61523 VTVLGHVQR 9 0 1 Unmodified _VTVLGHVQR_ 0 0 0 A0A024R0Y5;P08237;A0A0S2Z4A1;B4E162;P17858;Q7L2M7 A0A024R0Y5;P17858 A0A024R0Y5 PFKM;PFKL ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.8053 2 504.801083 1007.58761 87869.52 0.33569 0.00016946 -0.64765 -0.00032693 -0.31195 -0.00015747 504.800715347091 509.804941276786 32.228 0.31561 32.228 32.083 32.398 0 50 16 5 0 0 0 0.050765 1 13367 37.727 32.525 1 1.3062 1.1361 0 1794800 903090 891760 39212 61;1495 14765 15168 61524 61524 VTVLVMCHTR 10 0 1 Acetyl (Protein N-term),Oxidation (M) _(ac)VTVLVM(ox)CHTR_ VTVLVM(1)CHTR VTVLVM(42.11)CHTR 1 1 0 A0A0D9SEM9 A0A0D9SEM9 A0A0D9SEM9 DDX39A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.3271 2 637.323208 1272.63186 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.795 1 57.795 57.295 58.295 3.8147E-06 0 0 0 0.012123 1 33494 42.109 8.3124 1 39213 521 14766 15169 61525 61525 381 VTVMASLR 8 0 1 Oxidation (M) _VTVM(ox)ASLR_ VTVM(1)ASLR VTVM(42.6)ASLR 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 446.7494 2 446.74967 891.484787 87448.36 -0.075289 -3.3635E-05 -0.79217 -0.0003539 -0.86745 -0.00038754 446.749704513435 451.753496262698 37.849 0.5282 37.849 37.637 38.166 -3.8147E-06 144 39 5 0 0 0 0.025751 1 19752 42.599 18.396 1 1.2541 1.3694 0 38940000 18692000 20248000 39214 1665 14767 15170 61526 61526 1465 VTVNPGLLVPLDVK 14 1 0 Unmodified _VTVNPGLLVPLDVK_ 0 0 0 CON__Q6KB66-1;Q6KB66 CON__Q6KB66-1 CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 732.9479 2 732.445234 1462.87592 NaN NaN NaN -0.23291 -0.0001706 NaN NaN NaN NaN 118.35 0.30794 118.35 118.2 118.51 0 0 0 0 0.016025 1 77764 48.004 30.568 1 NaN NaN 0 5776300 5776300 0 + 39215 1177 14768 15171 61527 61527 VTVNPGLLVPLDVK 14 1 0 Unmodified _VTVNPGLLVPLDVK_ 0 0 0 CON__Q6KB66-1;Q6KB66 CON__Q6KB66-1 CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 732.4466 2 732.445234 1462.87592 73964.71 0.95386 0.00069865 0.09639 7.06E-05 1.0503 0.00076925 732.445219261037 736.452333452581 131.08 0.28012 131.08 130.92 131.2 0 54 12 6 0 0 0 0.054751 1 78566 24.254 24.254 1 0.66578 0.58591 0 1242100 613720 628350 + 39216 1177 14768 15171 61528 61528 VTVPLVR 7 0 1 Unmodified _VTVPLVR_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0;Q5QPM1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 392.2578 2 392.257988 782.501424 95832.22 -0.050769 -1.9915E-05 0.23379 9.1705E-05 0.18302 7.179E-05 392.257896807247 397.262076200898 65.183 0.95477 65.183 64.73 65.685 -7.6294E-06 299 83 6 0 0 0 0.024609 1 37400 89.903 1.1685 1 0.92067 1.0035 0 51447000 26898000 24549000 39217 741 14769 15172 61529 61529 VTVPLVR 7 0 1 Unmodified _VTVPLVR_ 0 0 0 A8K4T9;Q53GL6;Q5QPL9;Q9UKM9;Q5QPM0;Q5QPM1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.2618 2 392.257988 782.501424 95510.77 0.20194 7.9214E-05 -0.024486 -9.6049E-06 0.17746 6.961E-05 392.257856686361 397.261958580539 63.831 0.8873 63.831 63.4 64.287 0 318 80 6 0 0 0 0.031504 1 37406 67.035 11.594 1 0.95429 1.1044 0 56967000 29728000 27239000 39218 741 14769 15172 61530 61530 VTWDSSFCAVNPR 13 0 1 Unmodified _VTWDSSFCAVNPR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 774.8607 2 769.856457 1537.69836 68567.61 0.93821 0.00072229 -0.77302 -0.00059511 0.16519 0.00012717 769.856832702818 774.860236055893 85.009 0.86438 85.009 84.413 85.277 7.6294E-06 211 72 5 0 0 0 6.1121E-05 4 50891 95.81 82.718 1 2.0803 2.1145 0 27606000 6921100 20685000 39219 340 14770 15173 61531;61532;61533;61534 61531 VTWDSSFCAVNPR 13 0 1 Unmodified _VTWDSSFCAVNPR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 774.8604 2 769.856457 1537.69836 NaN NaN NaN -1.307 -0.0010062 NaN NaN NaN NaN 84.012 0.62099 84.012 83.741 84.362 0 0 0 0 1.0452E-05 1 51524 98.04 77.737 1 NaN NaN 0 11820000 0 11820000 39220 340 14770 15173 61535 61535 VTWDSSFCAVNPR 13 0 1 Unmodified _VTWDSSFCAVNPR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 774.8602 2 769.856457 1537.69836 NaN NaN NaN -0.33527 -0.00025811 NaN NaN NaN NaN 97.249 0.75481 97.249 96.877 97.632 0 0 0 0 0.0055307 1 54587 57.348 49.124 1 NaN NaN 0 4383100 0 4383100 39221 340 14770 15173 61536 61536 VTWDSSFCAVNPR 13 0 1 Unmodified _VTWDSSFCAVNPR_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 774.8611 2 769.856457 1537.69836 NaN NaN NaN -0.34852 -0.00026831 NaN NaN NaN NaN 97.188 0.75911 97.188 96.841 97.6 0 0 0 0 0.00052011 1 53819 83 70.044 1 NaN NaN 0 5214800 0 5214800 39222 340 14770 15173 61537 61537 VTWLVSWTENIQGSIK 16 1 0 Unmodified _VTWLVSWTENIQGSIK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 931.4973 2 930.996351 1859.97815 62821.73 0.78062 0.00072675 -0.66933 -0.00062314 0.11129 0.00010361 930.995599537848 935.50454206664 134.63 0.14542 134.63 134.56 134.7 0 17 3 8 0 0 0 2.9651E-06 1 82301 90.697 90.697 1 1.2806 1.0518 0 38046000 18754000 19292000 39223 1470 14771 15174 61538 61538 VTWLVSWTENIQGSIK 16 1 0 Unmodified _VTWLVSWTENIQGSIK_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 935.0042 2 930.996351 1859.97815 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.65 1 134.65 134.15 135.15 -1.5259E-05 0 0 0 0.00054688 1 82298 77.078 61.189 1 39224 1470 14771 15174 61539 61539 VTWVSQASADQR 12 0 1 Unmodified _VTWVSQASADQR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.3414 2 674.336215 1346.65788 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.73 1 45.73 45.23 46.23 0 0 0 0 0.0088094 1 24636 58.37 41.653 1 39225 1897 14772 15175 61540 61540 VTWVSQASADQR 12 0 1 Unmodified _VTWVSQASADQR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3403 2 674.336215 1346.65788 78656.96 0.70636 0.00047632 -0.067878 -4.5773E-05 0.63848 0.00043055 674.336558581438 679.339995076701 44.876 0.38518 44.876 44.677 45.062 0 58 29 4 0 0 0 1.4464E-05 3 24532 105.98 105.98 1 1.3456 1.3528 0 11090000 4552300 6537900 39226 1897 14772 15175 61541;61542;61543 61542 VTWVSQASADQR 12 0 1 Unmodified _VTWVSQASADQR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.3394 2 674.336215 1346.65788 NaN NaN NaN 0.17892 0.00012065 NaN NaN NaN NaN 53.398 0.39376 53.398 53.116 53.509 0 0 0 0 0.022819 1 25972 50.194 38.975 1 NaN NaN 0 2088000 0 2088000 39227 1897 14772 15175 61544 61544 VTWVSQASADQR 12 0 1 Unmodified _VTWVSQASADQR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 674.337 2 674.336215 1346.65788 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.374 1 53.374 52.874 53.874 -3.8147E-06 0 0 0 0.0020071 1 25909 68.847 59.489 1 39228 1897 14772 15175 61545 61545 VTYHPDGPEGQAYDVDFTPPFR 22 0 1 Unmodified _VTYHPDGPEGQAYDVDFTPPFR_ 0 0 0 Q15046 Q15046 Q15046 KARS Lysine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.3894 3 836.720394 2507.13935 67492.54 0.80304 0.00067192 -0.17303 -0.00014478 0.63001 0.00052715 837.055194433825 840.390121929641 99.582 0.67677 99.582 99.304 99.981 0 258 53 8 0 0 0 0.00078103 1 62316 31.176 31.176 1 1.8585 1.8635 0 17874000 8318800 9555600 39229 1749 14773 15176 61546 61546 VTYTPMAPGSYLISIK 16 1 0 Oxidation (M) _VTYTPM(ox)APGSYLISIK_ VTYTPM(1)APGSYLISIK VTYTPM(44.62)APGSYLISIK 0 1 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 882.969 2 878.963131 1755.91171 65765.72 0.76616 0.00067343 -0.69978 -0.00061508 0.066381 5.8346E-05 878.963194855399 883.470878216861 106.54 0.53136 106.54 106.28 106.81 -7.6294E-06 150 38 7 0 0 0 0.00076132 2 66103 44.616 42.041 1 1.3456 1.403 0 12270000 5203300 7066500 39230 1504 14774 15177 61547;61548 61547 1270 VTYVVLDEADR 11 0 1 Unmodified _VTYVVLDEADR_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.3334 2 640.330067 1278.64558 76182.42 0.43911 0.00028118 -0.42825 -0.00027422 0.010868 6.959E-06 640.330188283148 645.333287111837 74.734 0.59447 74.734 74.486 75.081 7.6294E-06 159 50 4 0 0 0 0.00029522 1 43835 88.681 68.447 1 0.82047 0.85558 0 13341000 6552300 6788800 39231 511 14775 15178 61549 61549 VVAEVYDQER 10 0 1 Unmodified _VVAEVYDQER_ 0 0 0 A0A0J9YYL3;A0A0J9YXJ8;A0A0J9YVP6;A0A0J9YXX5;Q9UHX1 A0A0J9YYL3 A0A0J9YYL3 PUF60 Poly(U)-binding-splicing factor PUF60 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.301 2 604.30131 1206.58807 NaN NaN NaN NaN NaN NaN NaN NaN NaN 36.933 1 36.933 36.433 37.433 0 0 0 0 0.011936 1 18741 56.729 35.828 1 39232 537 14776 15179 61550 61550 VVAVFVQGPAWQFK 14 1 0 Unmodified _VVAVFVQGPAWQFK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.4385 2 788.437744 1574.86093 68466 0.68907 0.00054329 -0.0041701 -3.2879E-06 0.6849 0.00054 788.939352052514 792.444946643694 115.46 0.56345 115.46 115.18 115.74 7.6294E-06 176 38 6 0 0 0 3.2075E-09 2 73417 113.62 113.62 1 1.5083 1.4786 0 20734000 8746300 11987000 39233 1851 14777 15180 61551;61552 61552 VVAVFVQGPAWQFK 14 1 0 Unmodified _VVAVFVQGPAWQFK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 788.9399 2 788.437744 1574.86093 69725.3 0.73629 0.00058052 0.10167 8.0164E-05 0.83796 0.00066068 788.437660774184 792.445004714147 126.84 0.75748 126.84 126.33 127.08 7.6294E-06 103 29 6 0 0 0 0.00077385 2 76359 58.433 58.433 1 1.6299 1.2664 0 3606600 1480100 2126500 39234 1851 14777 15180 61553;61554 61554 VVAVFVQGPAWQFK 14 1 0 Unmodified _VVAVFVQGPAWQFK_ 0 0 0 Q6P1J9;A0A1B0GUB2;A0A0S2Z5M9 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 788.9368 2 788.437744 1574.86093 70199.72 0.70732 0.00055768 0.012798 1.009E-05 0.72012 0.00056777 788.437681804814 792.444935103137 126.66 0.7223 126.66 126.19 126.91 0 101 31 8 0 0 0 0.0018883 1 75265 50.473 50.473 1 1.5934 1.283 0 4269000 1395600 2873400 39235 1851 14777 15180 61555 61555 VVDALGNAIDGK 12 1 0 Unmodified _VVDALGNAIDGK_ 0 0 0 V9HW26;P25705;K7ERX7;B4DGW3;K7EK77;K7EQH4;K7EJP1;K7ENJ4 V9HW26 V9HW26 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.3271 2 586.319502 1170.62445 NaN NaN NaN -0.60764 -0.00035627 NaN NaN NaN NaN 64.191 0.3979 64.191 64.044 64.442 0 0 0 0 0.00016048 1 36914 91.937 78.981 1 NaN NaN 0 6181500 0 6181500 39236 1518 14778 15181 61556 61556 VVDALNQGLPR 11 0 1 Unmodified _VVDALNQGLPR_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 590.814 2 591.335487 1180.65642 75682.19 0.51603 0.00030515 -0.76366 -0.00045158 -0.24763 -0.00014643 591.334785252251 596.33917400513 75.928 0.36208 75.928 75.661 76.023 -7.6294E-06 110 23 8 0 0 0 0.050776 1 40468 55.112 47.463 1 1.1157 0.95932 0 6746100 2765800 3980200 39237 1745 14779 15182 61557 61557 VVDHVLGPLNSSTSLGQNTSTSSNLQR 27 0 1 Unmodified _VVDHVLGPLNSSTSLGQNTSTSSNLQR_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 938.4804 3 937.812564 2810.41586 63366.32 0.71915 0.00067443 -0.10604 -9.9445E-05 0.61311 0.00057498 938.480703394484 941.482714469308 79.676 0.5149 79.676 79.463 79.978 0 166 44 6 0 0 0 5.75E-19 3 47263 74.905 74.905 1 0.9916 1.0162 0 19200000 9375800 9824100 39238 1680 14780 15183 61558;61559;61560 61560 VVDHVLGPLNSSTSLGQNTSTSSNLQR 27 0 1 Unmodified _VVDHVLGPLNSSTSLGQNTSTSSNLQR_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 938.1468 3 937.812564 2810.41586 63260.16 0.40534 0.00038013 0.10321 9.679E-05 0.50855 0.00047692 938.146956378122 941.482976464387 78.474 0.49057 78.474 78.228 78.719 7.6294E-06 257 42 8 0 0 0 5.4514E-23 4 47602 97.542 97.542 1 0.7547 0.82675 0 31590000 17254000 14336000 39239 1680 14780 15183 61561;61562;61563;61564 61563 VVDHVLGPLNSSTSLGQNTSTSSNLQR 27 0 1 Unmodified _VVDHVLGPLNSSTSLGQNTSTSSNLQR_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 941.1479 3 937.812564 2810.41586 62918.64 0.79925 0.00074955 -0.38867 -0.0003645 0.41058 0.00038505 938.146622904584 941.482763983645 91.195 0.62483 91.195 90.945 91.57 0 274 41 11 0 0 0 0.033467 1 50524 14.215 14.215 1 1.9296 1.5828 0 16966000 6621800 10344000 39240 1680 14780 15183 61565 61565 VVDHVLGPLNSSTSLGQNTSTSSNLQR 27 0 1 Unmodified _VVDHVLGPLNSSTSLGQNTSTSSNLQR_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 941.4822 3 937.812564 2810.41586 62652.63 0.4988 0.00046778 -0.44614 -0.0004184 0.052663 4.9388E-05 938.146454145263 941.482440591692 90.925 0.6245 90.925 90.689 91.314 0 239 37 10 0 0 0 2.0804E-16 2 49574 72.082 72.082 1 1.9834 1.6441 0 15061000 4823300 10238000 39241 1680 14780 15183 61566;61567 61566 VVDLAPLHLDAR 12 0 1 Unmodified _VVDLAPLHLDAR_ 0 0 0 Q9Y5Q9;H7C0C0 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 443.5901 3 440.254105 1317.74048 95322.74 0.22107 9.7325E-05 -0.2619 -0.0001153 -0.040835 -1.7978E-05 440.588289069213 443.590039863828 86.991 0.6048 86.991 86.735 87.34 7.6294E-06 78 47 4 0 0 0 0.026373 1 52597 20.124 14.091 1 1.1534 1.2117 0 11687000 5731500 5955000 39242 2150 14781 15184 61568 61568 VVDLAPLHLDAR 12 0 1 Unmodified _VVDLAPLHLDAR_ 0 0 0 Q9Y5Q9;H7C0C0 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 440.2541 3 440.254105 1317.74048 91047.92 0.41519 0.00018279 -0.12887 -5.6737E-05 0.28632 0.00012605 440.253938303131 443.59001634573 85.836 0.54978 85.836 85.467 86.017 0 147 39 5 0 0 0 0.013426 1 52735 33.685 22.472 1 0.96412 1.0527 0 30005000 15481000 14523000 39243 2150 14781 15184 61569 61569 VVDLLAPYAK 10 1 0 Unmodified _VVDLLAPYAK_ 0 0 0 H0YH81;Q0QEN7;V9HW31;P06576;F8W079 H0YH81 H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.8287 2 544.82115 1087.62775 82801.72 0.87807 0.00047839 -1.7054 -0.00092911 -0.82728 -0.00045072 544.821123301542 548.828242358142 91.227 0.56387 91.227 90.862 91.426 0 108 49 5 0 0 0 0.004316 1 56367 61.679 56.197 1 1.4822 1.5256 0 11613000 5071700 6541800 39244 1292 14782 15185 61570 61570 VVDLLAPYAK 10 1 0 Unmodified _VVDLLAPYAK_ 0 0 0 H0YH81;Q0QEN7;V9HW31;P06576;F8W079 H0YH81 H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 544.821 2 544.82115 1087.62775 85489.5 0.65119 0.00035478 -0.21989 -0.0001198 0.4313 0.00023498 544.820944054561 548.828198408673 105.05 0.34671 105.05 104.83 105.18 -7.6294E-06 64 19 4 0 0 0 0.047444 1 59841 36.557 36.557 1 0.59745 0.50294 0 1402400 901260 501100 39245 1292 14782 15185 61571 61571 VVDLLAPYAK 10 1 0 Unmodified _VVDLLAPYAK_ 0 0 0 H0YH81;Q0QEN7;V9HW31;P06576;F8W079 H0YH81 H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 544.8214 2 544.82115 1087.62775 86272.93 0.47698 0.00025987 0.1238 6.7448E-05 0.60078 0.00032732 544.821047405078 548.828431515727 104.78 0.42757 104.78 104.55 104.98 0 73 22 5 0 0 0 0.03341 1 58776 41.429 41.429 1 0.57421 0.50281 0 1309000 749290 559680 39246 1292 14782 15185 61572 61572 VVDLMAHMASK 11 1 0 2 Oxidation (M) _VVDLM(ox)AHM(ox)ASK_ VVDLM(1)AHM(1)ASK VVDLM(49.93)AHM(49.93)ASK 0 2 0 V9HVZ4;P04406;Q2TSD0;E7EUT5;Q16768 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 414.5418 3 411.870386 1232.58933 92871.86 -0.098435 -4.0542E-05 -0.42107 -0.00017342 -0.5195 -0.00021397 411.870301071305 414.541708855731 21.88 0.50021 21.88 21.624 22.124 0 124 23 8 0 0 0 0.0039268 1 7916 49.934 46.08 1 4.0693 4.4958 0 44633000 7664200 36969000 39247 1442 14783 15186 61573 61573 1147;1148 VVDPFSK 7 1 0 Unmodified _VVDPFSK_ 0 0 0 Q6NXR8;A8K4W0;P61247;B7Z3M5;H0Y8L7;E9PFI5;H0Y9Y4;D6RI02 Q6NXR8 Q6NXR8 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 400.2257 2 396.218529 790.422505 95522.42 -0.034526 -1.368E-05 0.26021 0.0001031 0.22569 8.9422E-05 396.218470577527 400.225699867905 58.512 1.5244 58.512 57.614 59.139 0 514 116 8 0 0 0 0.053742 1 29071 53.351 45.011 1 0.90082 0.72253 0 18861000 9717600 9143900 39248 742 14784 15187 61574 61574 VVDQACTLEK 10 1 0 Unmodified _VVDQACTLEK_ 0 0 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.7927 2 581.792263 1161.56997 83740.69 0.32377 0.00018836 -0.20251 -0.00011782 0.12125 7.0545E-05 581.792144370066 585.799395656381 27.745 0.20853 27.745 27.609 27.818 0 33 10 4 0 0 0 6.0556E-08 2 13003 113.71 73.438 1 0.67266 0.6801 0 13131000 6211700 6919400 39249 1928 14785 15188 61575;61576 61576 VVDQACTLEK 10 1 0 Unmodified _VVDQACTLEK_ 0 0 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 581.7928 2 581.792263 1161.56997 79753.25 0.31407 0.00018272 0.28816 0.00016765 0.60223 0.00035037 581.792507258243 585.799451790546 32.133 0.3546 32.133 31.958 32.313 0 63 18 5 0 0 0 0.0096567 2 13764 54.416 30.988 1 1.3591 1.112 0 2610900 1118000 1492900 39250 1928 14785 15188 61577;61578 61578 VVDQACTLEK 10 1 0 Unmodified _VVDQACTLEK_ 0 0 0 Q8NG31;H0YCZ2;E9PPJ1 Q8NG31 Q8NG31 CASC5 Protein CASC5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.7936 2 581.792263 1161.56997 78566.71 0.45274 0.0002634 -0.046411 -2.7001E-05 0.40633 0.0002364 581.79215604381 585.799337927492 32.297 0.31559 32.297 32.124 32.44 0 66 16 5 0 0 0 0.019072 1 13371 47.198 23.769 1 1.3693 1.0828 0 2321900 950500 1371400 39251 1928 14785 15188 61579 61579 VVDRDSEEAEIIR 13 0 2 Unmodified _VVDRDSEEAEIIR_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.9305 3 510.930126 1529.76855 84539.82 0.79071 0.000404 0.19137 9.7775E-05 0.98208 0.00050177 510.929981502713 517.60264166746 41.332 0.93431 41.332 40.972 41.906 0 431 77 9 0 0 0 1.9297E-09 1 21620 104.41 91.537 1 0.57689 0.62942 0 151650000 101070000 50586000 39252 139 14786 15189 61580 61580 VVDRDSEEAEIIR 13 0 2 Unmodified _VVDRDSEEAEIIR_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 766.3932 2 765.891552 1529.76855 70451.93 1.0156 0.00077786 0.23449 0.00017959 1.2501 0.00095745 765.891601420318 775.900194948949 41.348 0.57181 41.348 41.028 41.6 0 217 47 7 0 0 0 4.6144E-05 2 21685 101.89 101.89 1 0.5352 0.58199 0 50376000 33786000 16590000 39253 139 14786 15189 61581;61582 61581 VVDRDSEEAEIIR 13 0 2 Unmodified _VVDRDSEEAEIIR_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.9301 3 510.930126 1529.76855 84164.77 0.51079 0.00026098 0.50251 0.00025675 1.0133 0.00051772 510.930118756212 517.603067573138 40.259 0.88852 40.259 39.925 40.813 0 406 72 9 0 0 0 2.0419E-05 1 21323 83.729 83.729 1 0.54693 0.65352 0 255990000 168120000 87873000 39254 139 14786 15189 61583 61583 VVDRDSEEAEIIR 13 0 2 Unmodified _VVDRDSEEAEIIR_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.8917 2 765.891552 1529.76855 70667.23 0.76996 0.00058971 0.18835 0.00014425 0.95831 0.00073396 765.891553565877 775.900180544419 40.264 0.50151 40.264 39.993 40.494 -3.8147E-06 172 42 6 0 0 0 1.0235E-12 2 21424 129.84 129.84 1 0.48494 0.56808 0 118120000 71698000 46418000 39255 139 14786 15189 61584;61585 61584 VVDRDSEEAEIIR 13 0 2 Unmodified _VVDRDSEEAEIIR_ 0 0 1 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.9305 3 510.930126 1529.76855 84426.46 0.073884 3.775E-05 0.23347 0.00011929 0.30735 0.00015703 510.930105030942 517.602338153293 48.241 0.75338 48.241 47.97 48.724 3.8147E-06 283 66 6 0 0 0 6.5082E-05 1 22938 77.527 77.527 1 1.0059 0.92848 0 17428000 8529900 8897700 39256 139 14786 15189 61586 61586 VVDRDSEEAEIIRK 14 1 2 Unmodified _VVDRDSEEAEIIRK_ 0 0 2 A0A024R3T8;P09874;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.6271 3 553.628448 1657.86351 NaN NaN NaN -1.5044 -0.00083286 NaN NaN NaN NaN 28.868 0.31142 28.868 28.682 28.993 1.9073E-06 0 0 0 1.2492E-11 1 13825 118.13 100.11 1 NaN NaN 0 11393000 11393000 0 39257 139 14787 15190 61587 61587 VVDRDSEEAEIIRK 14 1 2 Unmodified _VVDRDSEEAEIIRK_ 0 0 2 A0A024R3T8;P09874;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.6288 3 553.628448 1657.86351 81292.02 0.56953 0.00031531 0.16919 9.367E-05 0.73873 0.00040898 553.628368842867 562.972194507879 34.179 0.63648 34.179 33.981 34.617 0 244 53 7 0 0 0 0.0014547 1 15086 40.278 40.278 1 1.1422 1.0674 0 11291000 5553600 5737600 39258 139 14787 15190 61588 61588 VVEATNSVTAVR 12 0 1 Unmodified _VVEATNSVTAVR_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.3442 2 623.343509 1244.67246 77600.7 0.51458 0.00032076 -0.14841 -9.2508E-05 0.36618 0.00022825 623.343312912031 628.347716926427 39.604 0.43361 39.604 39.373 39.807 0 152 37 6 0 0 0 6.1121E-09 2 20531 148.56 99.139 1 0.81354 0.89382 0 54065000 31380000 22686000 39259 672 14788 15191 61589;61590 61590 VVEATNSVTAVR 12 0 1 Unmodified _VVEATNSVTAVR_ 0 0 0 A4LAA3;P46100;B4DHH8;B4DLE1;B4DLW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.3483 2 623.343509 1244.67246 76059.34 0.59704 0.00037216 -0.061847 -3.8552E-05 0.5352 0.00033361 623.343629554487 628.34783371216 38.571 0.41071 38.571 38.385 38.796 0 134 35 6 0 0 0 4.7391E-08 2 20255 139.43 79.018 1 0.75272 0.87274 0 65711000 37624000 28087000 39260 672 14788 15191 61591;61592 61592 VVEAVNSDSDSEFGIPK 17 1 0 Unmodified _VVEAVNSDSDSEFGIPK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 897.4347 2 896.933613 1791.85267 64438.61 0.70455 0.00063193 -0.17405 -0.00015611 0.53049 0.00047582 896.932621363302 900.940862289595 80.937 0.46695 80.937 80.715 81.182 0 200 38 7 0 0 0 0.00011728 3 48148 78.324 78.324 1 0.85068 0.83347 0 21514000 13192000 8322000 39261 1679 14789 15192 61593;61594;61595 61595 VVEAVNSDSDSEFGIPK 17 1 0 Unmodified _VVEAVNSDSDSEFGIPK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.942 2 896.933613 1791.85267 64187.47 0.75727 0.00067922 1.102 0.00098845 1.8593 0.0016677 897.433900234225 900.940719909572 79.99 0.59222 79.99 79.693 80.286 0 223 46 7 0 0 0 3.9871E-09 3 48614 105.65 105.65 1 0.76789 0.79406 0 18534000 9920900 8613100 39262 1679 14789 15192 61596;61597;61598 61598 VVEAVNSDSDSEFGIPK 17 1 0 Unmodified _VVEAVNSDSDSEFGIPK_ 0 0 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.4432 2 896.933613 1791.85267 NaN NaN NaN 0.14469 0.00012978 NaN NaN NaN NaN 92.811 0.52269 92.811 92.548 93.07 0 0 0 0 0.0041265 1 51664 51.841 42.154 1 NaN NaN 0 2904400 0 2904400 39263 1679 14789 15192 61599 61599 VVEELTR 7 0 1 Unmodified _VVEELTR_ 0 0 0 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.2402 2 423.239993 844.465432 93836.39 -0.13017 -5.5092E-05 0.65368 0.00027666 0.52351 0.00022157 423.240122421159 428.244282557732 29.297 0.49275 29.297 29.023 29.516 0 153 34 8 0 0 0 0.010632 2 14139 110.61 47.325 1 0.65176 0.75722 0 179070000 105440000 73631000 39264 1770 14790 15193 61600;61601 61601 VVEELTR 7 0 1 Unmodified _VVEELTR_ 0 0 0 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 428.2441 2 423.239993 844.465432 92794.31 -0.45562 -0.00019284 0.63507 0.00026879 0.17945 7.595E-05 423.240188441154 428.244271731275 32.992 0.51234 32.992 32.749 33.262 0 140 35 6 0 0 0 0.030163 2 14377 69.176 40.753 1 1.1731 0.9729 0 20532000 9343900 11188000 39265 1770 14790 15193 61602;61603 61602 VVEELTR 7 0 1 Unmodified _VVEELTR_ 0 0 0 Q16531;B4DSA8;B4DZP5 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 428.2443 2 423.239993 844.465432 92305.19 -0.50399 -0.00021331 0.8211 0.00034752 0.3171 0.00013421 423.240242367226 428.244364639817 33.056 0.49419 33.056 32.787 33.281 0 138 31 6 0 0 0 0.042314 2 13954 58.604 37.304 1 1.1551 0.93953 0 12387000 5621700 6765400 39266 1770 14790 15193 61604;61605 61605 VVEGTPLIDGR 11 0 1 Unmodified _VVEGTPLIDGR_ 0 0 0 Q14739;A0A024R3R5 Q14739 Q14739 LBR Lamin-B receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.3256 2 578.322045 1154.62954 78015.92 0.63888 0.00036948 -1.3269 -0.00076738 -0.68803 -0.0003979 578.320549591069 583.325047700888 59.249 0.43957 59.249 59.038 59.478 0 167 39 7 0 0 0 0.00076687 1 34476 72.643 60.116 1 1.7768 2.0131 0 48064000 19249000 28815000 39267 1743 14791 15194 61606 61606 VVEIAPAAHLDPQLR 15 0 1 Unmodified _VVEIAPAAHLDPQLR_ 0 0 0 A0A024R5C5;P11498;E9PRE7 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 546.9788 3 543.64214 1627.90459 86336.3 0.82235 0.00044707 -0.39237 -0.00021331 0.42998 0.00023376 543.976252599953 546.978325714569 83.017 0.4297 83.017 82.816 83.246 0 92 37 4 0 0 0 0.0033477 1 49641 29.618 29.618 1 1.5253 1.6001 0 12103000 4032500 8070800 39268 176 14792 15195 61607 61607 VVEIAPAAHLDPQLR 15 0 1 Unmodified _VVEIAPAAHLDPQLR_ 0 0 0 A0A024R5C5;P11498;E9PRE7 A0A024R5C5 A0A024R5C5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 546.9783 3 543.64214 1627.90459 84335.8 0.77895 0.00042347 -0.40729 -0.00022142 0.37166 0.00020205 543.975994185596 546.978221243577 81.783 0.58694 81.783 81.516 82.103 0 120 50 5 0 0 0 6.8846E-05 1 49916 54.812 54.812 1 1.0397 1.0604 0 20664000 9187500 11477000 39269 176 14792 15195 61608 61608 VVEIVDEK 8 1 0 Unmodified _VVEIVDEK_ 0 0 0 E5RH50;A0A0B4J210;Q6PKG0;H0YC73;H0YBW1 E5RH50 E5RH50 LARP1 La-related protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.7673 2 465.760758 929.506963 NaN NaN NaN 0.23845 0.00011106 NaN NaN NaN NaN 40.615 0.33704 40.615 40.437 40.774 0 0 0 0 0.02193 2 21300 64.207 36.503 1 NaN NaN 0 6686200 0 6686200 39270 500 14793 15196 61609;61610 61610 VVENLQDDFDFNYK 14 1 0 Unmodified _VVENLQDDFDFNYK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.4042 2 873.404492 1744.79443 66194.26 0.81993 0.00071613 -0.026326 -2.2993E-05 0.7936 0.00069314 873.404649334121 877.411457003963 100.37 0.62389 100.37 100.11 100.74 0 169 51 6 0 0 0 0.00018442 2 61564 71.555 71.555 1 1.9022 1.9383 0 14216000 4435400 9780400 39271 1015 14794 15197 61611;61612 61612 VVENLQDDFDFNYK 14 1 0 Unmodified _VVENLQDDFDFNYK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 877.411 2 873.404492 1744.79443 65701.36 0.6317 0.00055173 -0.0094006 -8.2105E-06 0.6223 0.00054352 873.906720047098 877.411379681401 99.718 0.52173 99.718 99.487 100.01 0 152 38 6 0 0 0 1.6091E-09 3 62447 119.45 119.45 1 2.261 2.257 0 14504000 4879000 9625500 39272 1015 14794 15197 61613;61614;61615 61613 VVENLQDDFDFNYK 14 1 0 Unmodified _VVENLQDDFDFNYK_ 0 0 0 G8JLH9;B4DNP0;B7ZA24;B4DVR6;B5BTZ6;P40763 G8JLH9 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 877.4114 2 873.404492 1744.79443 NaN NaN NaN 2.4013 0.0020973 NaN NaN NaN NaN 112.87 0.57677 112.87 112.66 113.24 0 0 0 0 0.00087053 1 65660 75.819 59.188 1 NaN NaN 0 2606500 0 2606500 39273 1015 14794 15197 61616 61616 VVESGGPEILK 11 1 0 Unmodified _VVESGGPEILK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.3264 2 564.318971 1126.62339 80179.96 0.54324 0.00030656 -0.051334 -2.8969E-05 0.49191 0.00027759 564.318781796625 568.325945138411 53.81 1.0508 53.81 53.343 54.394 0 347 84 6 0 0 0 0.00038376 2 30112 82.749 64.098 1 0.95009 1.0714 0 112560000 58760000 53799000 39274 897 14795 15198 61617;61618 61618 VVESGGPEILK 11 1 0 Unmodified _VVESGGPEILK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.3194 2 564.318971 1126.62339 81042.47 0.82601 0.00046613 -0.53532 -0.00030209 0.29069 0.00016404 564.318883594235 568.325899949637 52.46 0.95777 52.46 52.055 53.013 -3.8147E-06 415 74 9 0 0 0 1.4269E-05 2 29909 107.15 86.634 1 0.95513 1.0972 0 171560000 88546000 83018000 39275 897 14795 15198 61619;61620 61619 VVESGGPEILK 11 1 0 Unmodified _VVESGGPEILK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.3267 2 564.318971 1126.62339 79870.7 0.52089 0.00029395 0.2115 0.00011935 0.73239 0.0004133 564.318889002244 568.326216496284 61.539 1.3209 61.539 61.226 62.547 0 451 107 6 0 0 0 0.00093586 3 31510 71.349 59.302 1 1.2968 1.0394 0 7422900 3162900 4260000 39276 897 14795 15198 61621;61622;61623 61621 VVESGGPEILK 11 1 0 Unmodified _VVESGGPEILK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7;A2VDI1;B4E263;B3KWS1;B7ZAU8;Q8N7L7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.3265 2 564.318971 1126.62339 81650.45 0.36572 0.00020638 -0.43352 -0.00024464 -0.067794 -3.8257E-05 564.318854826352 568.326231006739 62.176 1.5108 62.176 61.363 62.874 0 517 112 8 0 0 0 0.002424 3 31124 61.65 52.692 1 1.2947 1.055 0 6675100 3204000 3471100 39277 897 14795 15198 61624;61625;61626 61624 VVFAELACR 9 0 1 Unmodified _VVFAELACR_ 0 0 0 Q8NE71;Q2L6I2;Q59F96;H0YGW7;A0A0G2JIC2 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 533.2837 2 532.781502 1063.54845 83260.49 0.3825 0.00020379 0.034223 1.8233E-05 0.41672 0.00022202 532.781255400704 537.785718759791 87.075 0.78123 87.075 86.807 87.589 0 76 28 4 0 0 0 0.035569 1 47837 43.808 41.384 1 0.57501 0.50857 0 1491500 888370 603130 39278 1926 14796 15199 61627 61627 VVFELFSDVCPK 12 1 0 Unmodified _VVFELFSDVCPK_ 0 0 0 C9JT64;C9J679;C9JN15;Q6P432;Q32LZ0;Q2NKQ6;E9PG73;Q13427 C9JT64 C9JT64 PPIG Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase G MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3653 2 720.365595 1438.71664 71743.97 0.75553 0.00054426 -1.741 -0.0012542 -0.98549 -0.00070991 720.365580641774 724.874136075527 116.18 0.53558 116.18 115.92 116.45 0 119 33 7 0 0 0 0.00049856 1 73994 85.355 77.709 1 0.68517 0.67888 0 8251600 5967300 2284300 39279 1131 14797 15200 61628 61628 VVFELFSDVCPK 12 1 0 Unmodified _VVFELFSDVCPK_ 0 0 0 C9JT64;C9J679;C9JN15;Q6P432;Q32LZ0;Q2NKQ6;E9PG73;Q13427 C9JT64 C9JT64 PPIG Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase G MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.3737 2 720.365595 1438.71664 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.17 1 116.17 115.67 116.67 0 0 0 0 0.0011013 1 74119 72.006 60.854 1 39280 1131 14797 15200 61629 61629 VVFELFSDVCPK 12 1 0 Unmodified _VVFELFSDVCPK_ 0 0 0 C9JT64;C9J679;C9JN15;Q6P432;Q32LZ0;Q2NKQ6;E9PG73;Q13427 C9JT64 C9JT64 PPIG Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase G MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.3654 2 720.365595 1438.71664 70982.07 0.8831 0.00063615 -0.4208 -0.00030313 0.46229 0.00033302 720.365555570212 724.373239617296 115.57 0.74539 115.57 115.08 115.83 0 146 48 7 0 0 0 0.00022937 1 75415 100.48 100.48 1 0.82281 0.86207 0 10722000 5685000 5037300 39281 1131 14797 15200 61630 61630 VVFELFSDVCPK 12 1 0 Unmodified _VVFELFSDVCPK_ 0 0 0 C9JT64;C9J679;C9JN15;Q6P432;Q32LZ0;Q2NKQ6;E9PG73;Q13427 C9JT64 C9JT64 PPIG Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase G MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.3663 2 720.365595 1438.71664 72500.98 0.85692 0.00061729 -0.012571 -9.0557E-06 0.84435 0.00060824 720.365860032152 724.372586847581 127.63 0.58351 127.63 127.35 127.93 7.6294E-06 77 22 5 0 0 0 0.0049966 2 76947 66.19 66.19 1 0.45082 0.36939 0 2445400 1668400 777070 39282 1131 14797 15200 61631;61632 61631 VVFELFSDVCPK 12 1 0 Unmodified _VVFELFSDVCPK_ 0 0 0 C9JT64;C9J679;C9JN15;Q6P432;Q32LZ0;Q2NKQ6;E9PG73;Q13427 C9JT64 C9JT64 PPIG Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase G MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 720.8676 2 720.365595 1438.71664 71675.03 0.79459 0.00057239 -0.65873 -0.00047453 0.13585 9.7865E-05 720.365536349912 724.372043188858 127.4 0.70304 127.4 127.14 127.84 0 90 28 5 0 0 0 0.0013458 2 75887 72.006 72.006 1 0.41353 0.32266 0 2209800 1377700 832090 39283 1131 14797 15200 61633;61634 61633 VVFPSGEVVEQK 12 1 0 Unmodified _VVFPSGEVVEQK_ 0 0 0 Q9HC36;I3L0T6 Q9HC36 Q9HC36 RNMTL1 rRNA methyltransferase 3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.356 2 659.356085 1316.69762 76839.29 0.59836 0.00039453 -0.098837 -6.5169E-05 0.49952 0.00032936 659.356103222509 663.362394030347 81.245 0.52257 81.245 81.017 81.54 0 117 32 5 0 0 0 0.046405 1 44036 33.229 33.229 1 0.96452 0.81496 0 1533000 657210 875830 39284 2051 14798 15201 61635 61635 VVFPSGEVVEQK 12 1 0 Unmodified _VVFPSGEVVEQK_ 0 0 0 Q9HC36;I3L0T6 Q9HC36 Q9HC36 RNMTL1 rRNA methyltransferase 3, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.3564 2 659.356085 1316.69762 76833.27 0.65316 0.00043067 -0.32232 -0.00021253 0.33084 0.00021814 659.355993186838 663.362181069979 81.422 0.67606 81.422 81.136 81.812 0 100 32 5 0 0 0 0.023315 1 43335 37.344 37.344 1 0.94815 0.8335 0 1257000 490980 765980 39285 2051 14798 15201 61636 61636 VVFQEFR 7 0 1 Unmodified _VVFQEFR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 462.7507 2 462.750527 923.486502 NaN NaN NaN 0.078898 3.651E-05 NaN NaN NaN NaN 63.913 1.1642 63.913 63.45 64.614 -3.8147E-06 0 0 0 0.029404 1 37528 86.866 58.338 1 NaN NaN 0 31071000 31071000 0 39286 81 14799 15202 61637 61637 VVFQEFR 7 0 1 Unmodified _VVFQEFR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.7549 2 462.750527 923.486502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.619 1 63.619 63.119 64.119 3.8147E-06 0 0 0 0.013075 1 37411 83.614 55.91 1 39287 81 14799 15202 61638 61638 VVFQEFR 7 0 1 Unmodified _VVFQEFR_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.7545 2 462.750527 923.486502 87368.74 0.10922 5.054E-05 -0.13917 -6.44E-05 -0.02995 -1.3859E-05 462.750485122903 467.754484326179 74.878 1.02 74.878 74.539 75.559 0 242 68 5 0 0 0 0.026906 1 38880 82.305 68.53 1 2.7374 2.2312 0 9547700 2495400 7052400 39288 81 14799 15202 61639 61639 VVFRDPYR 8 0 2 Unmodified _VVFRDPYR_ 0 0 1 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 351.1941 3 351.194298 1050.56106 98974.09 0.43399 0.00015241 -0.26661 -9.3633E-05 0.16737 5.878E-05 351.194163590928 357.866323651431 41.083 1.2426 41.083 40.867 42.11 0 536 101 9 0 0 0 0.004415 1 21511 74.255 62.486 1 0.74842 0.81755 0 225540000 117290000 108240000 39289 1653 14800 15203 61640 61640 VVFRDPYR 8 0 2 Unmodified _VVFRDPYR_ 0 0 1 P62917;B4DVG7;E9PKZ0;E9PKU4;G3V1A1 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 351.1944 3 351.194298 1050.56106 99677.05 0.46995 0.00016504 -0.23646 -8.3042E-05 0.2335 8.2002E-05 351.194191570236 357.866294630234 39.952 1.3619 39.952 39.243 40.605 0 549 118 7 0 0 0 0.0064265 2 21049 64.207 47.111 1 0.71154 0.85393 0 303370000 173770000 129600000 39290 1653 14800 15203 61641;61642 61641 VVGAVIDQGLITR 13 0 1 Unmodified _VVGAVIDQGLITR_ 0 0 0 E9PLD3;A0A0B4J220;L0R588;E9PRG8 E9PLD3 E9PLD3 C11orf98;C11orf48 Uncharacterized protein C11orf98 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.4042 2 670.898451 1339.78235 74233.16 0.55847 0.00037468 0.1255 8.4196E-05 0.68397 0.00045887 670.898466258862 675.902641985848 89.875 0.77918 89.875 89.508 90.287 0 362 64 8 0 0 0 7.9327E-05 2 54054 94.297 42.37 1 0.75728 0.88319 0 193830000 116600000 77231000 39291 501 14801 15204 61643;61644 61643 VVGAVIDQGLITR 13 0 1 Unmodified _VVGAVIDQGLITR_ 0 0 0 E9PLD3;A0A0B4J220;L0R588;E9PRG8 E9PLD3 E9PLD3 C11orf98;C11orf48 Uncharacterized protein C11orf98 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.3906 2 670.898451 1339.78235 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.492 1 89.492 88.992 89.992 -7.6294E-06 0 0 0 0.0019276 1 54028 69.346 33.635 1 39292 501 14801 15204 61645 61645 VVGAVIDQGLITR 13 0 1 Unmodified _VVGAVIDQGLITR_ 0 0 0 E9PLD3;A0A0B4J220;L0R588;E9PRG8 E9PLD3 E9PLD3 C11orf98;C11orf48 Uncharacterized protein C11orf98 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.9026 2 670.898451 1339.78235 74318.27 0.75097 0.00050382 -0.17261 -0.00011581 0.57836 0.00038802 670.898331489482 675.902353182854 88.873 0.77089 88.873 88.602 89.373 0 370 63 9 0 0 0 2.7519E-13 2 54716 126.19 75.84 1 0.71522 0.83038 0 343000000 204310000 138690000 39293 501 14801 15204 61646;61647 61647 VVGAVIDQGLITR 13 0 1 Unmodified _VVGAVIDQGLITR_ 0 0 0 E9PLD3;A0A0B4J220;L0R588;E9PRG8 E9PLD3 E9PLD3 C11orf98;C11orf48 Uncharacterized protein C11orf98 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 670.8991 2 670.898451 1339.78235 74193.41 0.5488 0.00036819 0.11799 7.9158E-05 0.66678 0.00044734 670.898531538575 675.902573453286 102.62 1.0438 102.62 102.31 103.36 7.6294E-06 338 71 9 0 0 0 0.00011686 2 58132 76.143 50.706 1 0.62843 0.5404 0 46784000 28729000 18055000 39294 501 14801 15204 61648;61649 61649 VVGAVIDQGLITR 13 0 1 Unmodified _VVGAVIDQGLITR_ 0 0 0 E9PLD3;A0A0B4J220;L0R588;E9PRG8 E9PLD3 E9PLD3 C11orf98;C11orf48 Uncharacterized protein C11orf98 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.8987 2 670.898451 1339.78235 73900.45 0.42609 0.00028586 0.27748 0.00018616 0.70357 0.00047202 670.898603160725 675.902653439331 102.39 1.0586 102.39 102.13 103.19 0 334 72 8 0 0 0 0.00013633 2 57168 88.596 53.535 1 0.64187 0.55993 0 45002000 27764000 17238000 39295 501 14801 15204 61650;61651 61651 VVGCSCVVVK 10 1 0 Unmodified _VVGCSCVVVK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.7889 2 553.788469 1105.56239 80484.25 0.68515 0.00037943 -0.022037 -1.2204E-05 0.66311 0.00036722 553.788566847218 557.795671392467 38.402 0.72396 38.402 38.106 38.83 0 265 60 6 0 0 0 5.4663E-08 2 19615 114.89 114.89 1 1.2708 1.4631 0 209580000 92290000 117290000 39296 1515 14802 15205 61652;61653 61653 VVGCSCVVVK 10 1 0 Unmodified _VVGCSCVVVK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.789 2 553.788469 1105.56239 79967.38 0.44486 0.00024636 -0.03592 -1.9892E-05 0.40894 0.00022647 553.788587954682 557.795654822285 37.462 0.62631 37.462 37.169 37.795 0 238 50 6 0 0 0 2.2478E-09 2 19375 128.38 128.38 1 1.3648 1.5945 0 280730000 115610000 165110000 39297 1515 14802 15205 61654;61655 61654 VVGCSCVVVK 10 1 0 Unmodified _VVGCSCVVVK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.7894 2 553.788469 1105.56239 81556.27 0.41211 0.00022822 -0.32205 -0.00017835 0.090058 4.9873E-05 553.788531684743 557.795478663668 43.729 0.71758 43.729 43.438 44.155 3.8147E-06 207 44 7 0 0 0 0.009241 2 20639 54.982 54.982 1 1.4154 1.0968 0 13471000 5518600 7952900 39298 1515 14802 15205 61656;61657 61657 VVGCSCVVVK 10 1 0 Unmodified _VVGCSCVVVK_ 0 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.7881 2 553.788469 1105.56239 80175.63 0.50254 0.0002783 -0.47713 -0.00026423 0.025414 1.4074E-05 553.78841288671 557.795426921951 43.785 0.66795 43.785 43.517 44.185 0 192 44 6 0 0 0 0.019099 2 20101 47.187 47.187 1 1.4479 1.1932 0 12092000 4923000 7168500 39299 1515 14802 15205 61658;61659 61659 VVGEDVATSSSAK 13 1 0 Unmodified _VVGEDVATSSSAK_ 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 625.3181 2 625.317157 1248.61976 76416.62 0.53989 0.0003376 0.1277 7.9851E-05 0.66759 0.00041745 625.317203883597 629.32442424986 25.46 0.39479 25.46 25.33 25.725 0 74 21 6 0 0 0 2.8581E-13 2 11044 125.74 115.18 1 0.92717 0.94994 0 14392000 6822600 7569900 39300 1680 14803 15206 61660;61661 61660 VVGEDVATSSSAK 13 1 0 Unmodified _VVGEDVATSSSAK_ 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.3171 2 625.317157 1248.61976 76010.81 0.4658 0.00029127 0.021107 1.3199E-05 0.48691 0.00030447 625.317014203611 629.324060357433 25.234 0.30897 25.234 25.084 25.393 0 48 11 7 0 0 0 8.5266E-06 2 10880 101.93 92.97 1 0.89438 0.91871 0 25352000 11676000 13676000 39301 1680 14803 15206 61662;61663 61662 VVGEDVATSSSAK 13 1 0 Unmodified _VVGEDVATSSSAK_ 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.3254 2 625.317157 1248.61976 77004.16 0.48426 0.00030282 0.57179 0.00035755 1.056 0.00066037 625.318181607896 629.324371646315 28.497 0.35422 28.497 28.361 28.715 -1.9073E-06 75 18 6 0 0 0 0.0020343 2 11409 55.401 55.401 1 1.9401 1.518 0 3224700 1154600 2070100 39302 1680 14803 15206 61664;61665 61664 VVGEDVATSSSAK 13 1 0 Unmodified _VVGEDVATSSSAK_ 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 625.3173 2 625.317157 1248.61976 76813.82 0.20892 0.00013064 0.16936 0.0001059 0.37828 0.00023655 625.317280446602 629.324366324209 28.879 0.37853 28.879 28.693 29.072 1.9073E-06 93 21 7 0 0 0 0.00075813 2 11111 60.598 56.146 1 2.0642 1.6201 0 3309900 1032300 2277600 39303 1680 14803 15206 61666;61667 61667 VVGESLSPAFHLQLEESTGSR 21 0 1 Unmodified _VVGESLSPAFHLQLEESTGSR_ 0 0 0 A0A024R277;O15269;Q6NUL7 A0A024R277 A0A024R277 SPTLC1 Serine palmitoyltransferase 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 751.3823 3 748.381602 2242.12298 70830.54 0.77823 0.00058241 0.97726 0.00073136 1.7555 0.0013138 748.716655062243 752.052744603137 97.708 0.49261 97.708 97.447 97.939 -7.6294E-06 92 40 4 0 0 0 0.049674 1 59629 21.27 21.27 1 0.61095 0.62689 0 14353000 7930800 6422600 39304 107 14804 15207 61668 61668 VVGESLSPAFHLQLEESTGSR 21 0 1 Unmodified _VVGESLSPAFHLQLEESTGSR_ 0 0 0 A0A024R277;O15269;Q6NUL7 A0A024R277 A0A024R277 SPTLC1 Serine palmitoyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 748.3841 3 748.381602 2242.12298 71136.87 0.88513 0.00066241 0.63521 0.00047538 1.5203 0.0011378 748.716197382385 751.717861752844 96.797 0.44142 96.797 96.618 97.06 7.6294E-06 135 36 6 0 0 0 0.036253 1 60327 14.107 14.107 1 0.63505 0.63901 0 19348000 10663000 8684400 39305 107 14804 15207 61669 61669 VVGGFDR 7 0 1 Unmodified _VVGGFDR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 375.2005 2 375.20067 748.386788 95055.59 0.0654 2.4538E-05 -0.20155 -7.5622E-05 -0.13615 -5.1084E-05 375.200617528965 380.204699662719 27.169 0.57676 27.169 26.961 27.538 0 160 30 9 0 0 0 0.0099339 2 12381 114.19 77.629 1 1.0555 1.2101 0 134530000 64548000 69983000 39306 1570 14805 15208 61670;61671 61671 VVGGFDR 7 0 1 Unmodified _VVGGFDR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 375.2005 2 375.20067 748.386788 94296.66 0.48097 0.00018046 -0.34101 -0.00012795 0.13996 5.2511E-05 375.200535955185 380.204617024622 26.777 0.64984 26.777 26.555 27.205 -1.9073E-06 108 30 6 0 0 0 0.010731 2 12104 110.34 77.408 1 0.98165 1.1198 0 140960000 67703000 73254000 39307 1570 14805 15208 61672;61673 61673 VVGGFDR 7 0 1 Unmodified _VVGGFDR_ 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 380.2047 2 375.20067 748.386788 95993.06 -0.0048002 -1.801E-06 -0.18936 -7.105E-05 -0.19416 -7.2851E-05 375.200546724629 380.204643772492 29.978 0.78711 29.978 29.671 30.458 0 199 54 6 0 0 0 0.055196 1 12339 52.683 35.756 1 1.1831 0.96655 0 15834000 7201600 8632900 39308 1570 14805 15208 61674 61674 VVGSVGQHTGEPVEELALSHCGR 23 0 1 Unmodified _VVGSVGQHTGEPVEELALSHCGR_ 0 0 0 Q9H6Y2;G3V1J0;B4DE13 Q9H6Y2 Q9H6Y2 WDR55 WD repeat-containing protein 55 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 608.0547 4 605.301215 2417.17576 76011.2 0.57457 0.00034779 -0.13109 -7.9348E-05 0.44348 0.00026844 605.551732218472 608.054026808214 75.143 0.46866 75.143 74.963 75.432 0 187 34 8 0 0 0 0.0028575 2 39933 31.775 31.775 1 0.87428 0.74553 0 5588400 3015400 2573000 39309 2039 14806 15209 61675;61676 61675 VVGSVGQHTGEPVEELALSHCGR 23 0 1 Unmodified _VVGSVGQHTGEPVEELALSHCGR_ 0 0 0 Q9H6Y2;G3V1J0;B4DE13 Q9H6Y2 Q9H6Y2 WDR55 WD repeat-containing protein 55 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 608.0544 4 605.301215 2417.17576 76636.68 0.41858 0.00025337 -0.33625 -0.00020353 0.082324 4.9831E-05 605.551905839803 608.304195108354 75.33 0.62362 75.33 74.918 75.542 0 253 45 9 0 0 0 0.037334 1 39198 20.426 20.426 1 0.93308 0.82503 0 3928500 1555200 2373300 39310 2039 14806 15209 61677 61677 VVHIIQAR 8 0 1 Unmodified _VVHIIQAR_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 312.531 3 312.531021 934.571235 109113.3 0.38433 0.00012012 -0.15376 -4.8054E-05 0.23058 7.2063E-05 312.531049050648 315.86672393827 28.685 0.32665 28.685 28.54 28.866 1.9073E-06 65 17 7 0 0 0 0.002782 1 13672 76.035 67.852 1 0.59598 0.60683 0 27258000 16843000 10415000 39311 367 14807 15210 61678 61678 VVHIIQAR 8 0 1 Unmodified _VVHIIQAR_ 0 0 0 A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;X5CF57;A0A0G2JHN8;A0A140T9I1 A0A024RCR5 A0A024RCR5 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 316.199 3 312.531021 934.571235 108890.1 -0.094155 -2.9426E-05 -0.63334 -0.00019794 -0.7275 -0.00022737 312.530981854216 315.866981494584 27.663 0.45298 27.663 27.401 27.854 0 58 23 5 0 0 0 0.0081402 2 12909 54.549 54.549 1 0.7455 0.81515 0 35289000 18839000 16450000 39312 367 14807 15210 61679;61680 61679 VVHIIQSR 8 0 1 Unmodified _VVHIIQSR_ 0 0 0 O60885;A0A024R7H8;Q58F21;A0A024R8H6;Q15059;B4DS09 O60885;A0A024R8H6 O60885 BRD4;BRDT;BRD3 Bromodomain-containing protein 4;Bromodomain testis-specific protein;Bromodomain-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 317.8626 3 317.86266 950.566149 106918.5 -0.096432 -3.0652E-05 0.21818 6.9352E-05 0.12175 3.87E-05 317.862688359705 321.198736566262 25.642 0.4301 25.642 25.453 25.883 0 87 24 6 0 0 0 0.0022068 1 11220 73.208 60.619 1 0.66895 0.69474 0 20808000 13189000 7619600 39313 1399;249 14808 15211 61681 61681 VVHIMDFQR 9 0 1 Oxidation (M) _VVHIM(ox)DFQR_ VVHIM(1)DFQR VVHIM(44.32)DFQR 0 1 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;D6RBI2;D6RE02;D6RIA2;D6RAM9;D6RAY2 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 390.8702 3 387.534214 1159.58081 96877.42 0.3331 0.00012909 0.10147 3.9321E-05 0.43456 0.00016841 387.534288323138 390.870384836349 38.417 0.57849 38.417 38.104 38.683 0 154 48 8 0 0 0 0.0086881 1 20054 44.318 34.537 1 2.2355 2.5654 0 52055000 15976000 36079000 39314 542 14809 15212 61682 61682 400 VVIFQQEQENK 11 1 0 Unmodified _VVIFQQEQENK_ 0 0 0 Q56VW8;A0A140VJT0;P63151;E5RIY1 Q56VW8 Q56VW8 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 681.3563 2 681.356616 1360.69868 77161.07 0.58766 0.0004004 -0.25946 -0.00017679 0.3282 0.00022362 681.356276856067 685.363842527218 58.317 0.32518 58.317 58.177 58.503 3.8147E-06 65 26 4 0 0 0 0.01294 1 29641 47.603 41.568 1 1.9538 1.6608 0 1162300 324640 837630 39315 609 14810 15213 61683 61683 VVIIDEAHER 10 0 1 Unmodified _VVIIDEAHER_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 397.5515 3 394.215539 1179.62479 NaN NaN NaN 0.19844 7.8227E-05 NaN NaN NaN NaN 37.073 0.34691 37.073 36.913 37.26 0 0 0 0 0.053447 1 19242 29.936 17.32 1 NaN NaN 0 9304500 0 9304500 39316 1897 14811 15214 61684 61684 VVILMELEVLK 11 1 0 Oxidation (M) _VVILM(ox)ELEVLK_ VVILM(1)ELEVLK VVILM(56.73)ELEVLK 0 1 0 P27694;I3L524;I3L2M5 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3915 2 651.391082 1300.76761 80110.59 1.2979 0.00084541 -0.17601 -0.00011465 1.1218 0.00073076 651.391210435328 655.397891036261 119.08 0.44045 119.08 118.88 119.32 0 69 27 4 0 0 0 0.0024958 1 76514 56.729 56.729 1 1.7103 1.7279 0 4796600 1863800 2932800 39317 1525 14812 15215 61685 61685 1291 VVILMELEVLK 11 1 0 Oxidation (M) _VVILM(ox)ELEVLK_ VVILM(1)ELEVLK VVILM(64.3)ELEVLK 0 1 0 P27694;I3L524;I3L2M5 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.3932 2 651.391082 1300.76761 78554.29 0.67813 0.00044173 0.029853 1.9446E-05 0.70798 0.00046117 651.391390961462 655.398064039206 118.64 0.43581 118.64 118.33 118.77 0 70 26 4 0 0 0 0.00089958 1 77995 64.297 64.297 1 1.498 1.4882 0 6143400 1940900 4202500 39318 1525 14812 15215 61686 61686 1291 VVILMELEVLK 11 1 0 Oxidation (M) _VVILM(ox)ELEVLK_ VVILM(1)ELEVLK VVILM(46.89)ELEVLK 0 1 0 P27694;I3L524;I3L2M5 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3926 2 651.391082 1300.76761 NaN NaN NaN 0.54755 0.00035667 NaN NaN NaN NaN 131.62 0.40569 131.62 131.41 131.81 0 0 0 0 0.012809 1 79919 46.891 28.111 1 NaN NaN 0 854080 854080 0 39319 1525 14812 15215 61687 61687 1291 VVILNVDLLK 10 1 0 Unmodified _VVILNVDLLK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.3728 2 563.365724 1124.7169 81403.35 0.7255 0.00040872 -0.22132 -0.00012468 0.50419 0.00028404 563.365488854581 567.372611165309 116.05 0.59332 116.05 115.77 116.37 0 162 35 7 0 0 0 0.0029784 2 73842 66.621 51.361 1 1.0699 1.1563 0 35364000 17228000 18135000 39320 1741 14813 15216 61688;61689 61688 VVILNVDLLK 10 1 0 Unmodified _VVILNVDLLK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.373 2 563.365724 1124.7169 81658.9 0.84664 0.00047697 -0.14355 -8.0872E-05 0.70308 0.00039609 563.36554572085 567.37263829351 115.43 0.61939 115.43 115.19 115.81 0 184 39 7 0 0 0 0.00051176 2 75174 85.676 64.376 1 1.1158 1.2579 0 61274000 26049000 35225000 39321 1741 14813 15216 61690;61691 61690 VVILNVDLLK 10 1 0 Unmodified _VVILNVDLLK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 567.3735 2 563.365724 1124.7169 81588.31 0.87911 0.00049526 -0.21135 -0.00011906 0.66776 0.00037619 563.365591192176 567.372644584232 127.82 0.70026 127.82 127.51 128.21 0 108 26 6 0 0 0 0.031126 1 76970 42.348 37.365 1 1.2683 1.0159 0 7328100 3215200 4112900 39322 1741 14813 15216 61692 61692 VVILNVDLLK 10 1 0 Unmodified _VVILNVDLLK_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.366 2 563.365724 1124.7169 81191.8 0.68672 0.00038687 -0.027264 -1.536E-05 0.65945 0.00037151 563.36562650407 567.372705991122 127.61 0.53815 127.61 127.33 127.87 -7.6294E-06 85 21 5 0 0 0 0.013553 1 76068 49.418 47.44 1 1.5655 1.2817 0 5444100 1914100 3530000 39323 1741 14813 15216 61693 61693 VVITCPQDFPHCSIPLR 17 0 1 Unmodified _VVITCPQDFPHCSIPLR_ 0 0 0 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 680.6804 3 680.344889 2038.01284 NaN NaN NaN 0.055424 3.7707E-05 NaN NaN NaN NaN 93.26 0.4933 93.26 92.996 93.49 -7.6294E-06 0 0 0 0.00041988 2 56459 58.671 49.417 1 NaN NaN 0 12139000 12139000 0 39324 1738 14814 15217 61694;61695 61694 VVITCPQDFPHCSIPLR 17 0 1 Unmodified _VVITCPQDFPHCSIPLR_ 0 0 0 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 680.6798 3 680.344889 2038.01284 NaN NaN NaN -0.58948 -0.00040105 NaN NaN NaN NaN 92.384 0.48245 92.384 92.116 92.598 7.6294E-06 0 0 0 3.208E-07 2 57295 83.54 77.88 1 NaN NaN 0 12235000 12235000 0 39325 1738 14814 15217 61696;61697 61697 VVITCPQDFPHCSIPLR 17 0 1 Unmodified _VVITCPQDFPHCSIPLR_ 0 0 0 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 684.015 3 680.344889 2038.01284 74059.66 0.68296 0.00046465 -0.48786 -0.00033191 0.1951 0.00013274 680.345118228119 683.680233521002 106.56 0.41173 106.56 106.34 106.75 0 127 24 8 0 0 0 0.040596 1 60838 21.093 21.093 1 0.70235 0.58042 0 11405000 7659500 3745900 39326 1738 14814 15217 61698 61698 VVITCPQDFPHCSIPLR 17 0 1 Unmodified _VVITCPQDFPHCSIPLR_ 0 0 0 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 684.0148 3 680.344889 2038.01284 74131.45 0.68163 0.00046375 -0.59843 -0.00040714 0.083202 5.6606E-05 680.679011523891 684.014588891284 106.29 0.47459 106.29 106.02 106.49 7.6294E-06 124 28 8 0 0 0 5.5046E-05 1 59854 52.862 52.862 1 0.61558 0.51072 0 5128800 3027300 2101500 39327 1738 14814 15217 61699 61699 VVIVDPETGK 10 1 0 Unmodified _VVIVDPETGK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.8075 2 528.800414 1055.58628 84673.73 0.62017 0.00032795 -0.019498 -1.0311E-05 0.60068 0.00031764 528.800418231912 532.807437888191 50.813 0.74698 50.813 50.554 51.301 0 262 61 6 0 0 0 8.1742E-06 2 28655 106.6 90.397 1 1.7378 1.9577 0 68925000 23548000 45377000 39328 1754 14815 15218 61700;61701 61700 VVIVDPETGK 10 1 0 Unmodified _VVIVDPETGK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.8077 2 528.800414 1055.58628 86035.48 0.25023 0.00013232 0.18683 9.8798E-05 0.43706 0.00023112 528.800474296637 532.807530521447 59.657 0.83547 59.657 59.235 60.071 0 217 59 5 0 0 0 0.04172 1 30363 38.086 38.086 1 2.3491 1.8487 0 3109500 1008900 2100500 39329 1754 14815 15218 61702 61702 VVIVDPETGK 10 1 0 Unmodified _VVIVDPETGK_ 0 0 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 532.8076 2 528.800414 1055.58628 85031.06 0.34785 0.00018395 0.072995 3.86E-05 0.42085 0.00022255 528.800506036413 532.80749459281 60.137 0.66458 60.137 59.727 60.392 -3.8147E-06 185 46 5 0 0 0 0.036818 1 30006 40.058 32.578 1 2.3273 1.8343 0 3889200 1073100 2816100 39330 1754 14815 15218 61703 61703 VVIVDPETNK 10 1 0 Unmodified _VVIVDPETNK_ 0 0 0 P15924;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 557.3106 2 557.311146 1112.60774 82460.05 0.66914 0.00037292 -0.1751 -9.7586E-05 0.49403 0.00027533 557.31093284332 561.318015860093 56.807 0.4957 56.807 56.569 57.065 0 110 37 4 0 0 0 0.036959 1 28091 40.002 32.434 1 0.52399 0.43399 0 1711700 1179100 532530 39331 1486 14816 15219 61704 61704 VVLEAPLITESALEVVR 17 0 1 Unmodified _VVLEAPLITESALEVVR_ 0 0 0 A0A087WUE9;Q4LE61;B7Z6F7;A0A024R0R6;Q92797 A0A087WUE9 A0A087WUE9 SYMPK;SYMPK variant protein Symplekin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 919.5353 2 919.535309 1837.05606 64633.28 0.79922 0.00073491 -1.4725 -0.001354 -0.67326 -0.00061909 919.531624922535 925.040637822371 127.95 1.0342 127.95 127.39 128.43 0 106 42 6 0 0 0 0.0038294 1 83402 35.737 35.737 1 0.73756 0.76467 0 5773000 2982400 2790600 39332 56 14817 15220 61705 61705 VVLEHEEVR 9 0 1 Unmodified _VVLEHEEVR_ 0 0 0 Q9Y678;B3KW21;Q8WUI6 Q9Y678 Q9Y678 COPG1;COPG Coatomer subunit gamma-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 555.3026 2 555.301113 1108.58767 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.893 1 25.893 25.393 26.393 1.9073E-06 0 0 0 0.006942 1 11422 66.621 41.699 1 39333 2151 14818 15221 61706 61706 VVLIGGKPDR 10 1 1 Unmodified _VVLIGGKPDR_ 0 0 1 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.3353 2 527.324391 1052.63423 85256.25 0.4066 0.00021441 -0.11322 -5.9706E-05 0.29338 0.00015471 527.324188699435 536.335522691097 34.094 0.92354 34.094 33.414 34.337 0 229 89 4 0 0 0 0.038015 1 16734 57.96 49.541 1 1.721 1.9554 0 24288000 8454400 15834000 39334 102 14819 15222 61707 61707 VVLIGGKPDR 10 1 1 Unmodified _VVLIGGKPDR_ 0 0 1 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 357.8927 3 351.885353 1052.63423 100660.6 0.14939 5.2567E-05 -0.11116 -3.9116E-05 0.038225 1.3451E-05 351.885269228466 357.892833570336 34.018 1.397 34.018 33.151 34.548 0 562 130 6 0 0 0 0.022542 2 16760 43.297 36.018 1 1.5509 1.8647 0 80401000 31451000 48950000 39335 102 14819 15222 61708;61709 61708 VVLIGGKPDR 10 1 1 Unmodified _VVLIGGKPDR_ 0 0 1 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 357.8928 3 351.885353 1052.63423 99757.04 0.0021098 7.4242E-07 -0.1199 -4.2191E-05 -0.11779 -4.1449E-05 351.885306403608 357.892760065551 33.017 0.93805 33.017 32.458 33.396 0 390 86 8 0 0 0 0.0062582 2 16318 61.65 52.692 1 1.6257 1.9227 0 176630000 66096000 110540000 39336 102 14819 15222 61710;61711 61710 VVLIGGKPDR 10 1 1 Unmodified _VVLIGGKPDR_ 0 0 1 B4DUQ1;A0A024R228;Q5EC54;P61978;B4DFF1;Q5T6W2 B4DUQ1 B4DUQ1 HNRPK;HNRNPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.3358 2 527.324391 1052.63423 85330.98 0.25304 0.00013343 -0.011708 -6.1739E-06 0.24133 0.00012726 527.324323307341 536.335456940256 33.024 0.60532 33.024 32.648 33.253 0 219 55 6 0 0 0 0.016058 1 16418 66.621 56.634 1 1.5003 1.75 0 45713000 18845000 26868000 39337 102 14819 15222 61712 61712 VVLIVGETGSGK 12 1 0 Unmodified _VVLIVGETGSGK_ 0 0 0 Q6ZMY0;Q9H6S0;D6RA70 Q6ZMY0 Q6ZMY0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.847 2 579.840071 1157.66559 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.742 1 65.742 65.242 66.242 0 0 0 0 0.019966 1 38804 51.445 30.82 1 39338 1863 14820 15223 61713 61713 VVLLGAPNAGK 11 1 0 Unmodified _VVLLGAPNAGK_ 0 0 0 O75616;J3QSB2;J3QRV9;J3QT61 O75616 O75616 ERAL1 GTPase Era, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.8265 2 519.818941 1037.62333 86390.6 0.27132 0.00014103 0.24144 0.0001255 0.51275 0.00026654 519.819105879498 523.82604916777 62.028 0.4986 62.028 61.769 62.268 0 115 40 4 0 0 0 0.0085455 2 35470 50.607 45.872 1 1.3252 1.3472 0 13847000 5422100 8425100 39339 1410 14821 15224 61714;61715 61714 VVLLGAPNAGK 11 1 0 Unmodified _VVLLGAPNAGK_ 0 0 0 O75616;J3QSB2;J3QRV9;J3QT61 O75616 O75616 ERAL1 GTPase Era, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.826 2 519.818941 1037.62333 86823.79 -0.10218 -5.3116E-05 0.46437 0.00024139 0.36219 0.00018827 519.819301848261 523.826046828387 60.748 0.4778 60.748 60.465 60.942 -3.8147E-06 90 39 4 0 0 0 0.0037571 3 35584 59.245 53.586 1 1.9478 1.9442 0 14910000 6270800 8638900 39340 1410 14821 15224 61716;61717;61718 61718 VVLLGAPNAGK 11 1 0 Unmodified _VVLLGAPNAGK_ 0 0 0 O75616;J3QSB2;J3QRV9;J3QT61 O75616 O75616 ERAL1 GTPase Era, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.8268 2 519.818941 1037.62333 85488.15 0.019393 1.0081E-05 0.39506 0.00020536 0.41445 0.00021544 519.819163144055 523.826029760872 71.132 0.47424 71.132 70.956 71.43 -7.6294E-06 76 30 4 0 0 0 0.025826 1 37418 41.029 41.029 1 1.1037 0.93068 0 1557900 708750 849150 39341 1410 14821 15224 61719 61719 VVLLGAPNAGK 11 1 0 Unmodified _VVLLGAPNAGK_ 0 0 0 O75616;J3QSB2;J3QRV9;J3QT61 O75616 O75616 ERAL1 GTPase Era, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.819 2 519.818941 1037.62333 87304.22 -0.21211 -0.00011026 0.5696 0.00029609 0.35748 0.00018583 519.819189241129 523.826296179508 71.512 0.35096 71.512 71.353 71.704 7.6294E-06 53 21 4 0 0 0 0.017882 1 36884 45.081 45.081 1 1.0334 0.91179 0 916060 470260 445800 39342 1410 14821 15224 61720 61720 VVLLGEFLHPCEDDIVCK 18 1 0 Unmodified _VVLLGEFLHPCEDDIVCK_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.0243 3 715.023592 2142.04895 70473.53 0.57741 0.00041286 0.0059751 4.2724E-06 0.58338 0.00041713 715.358118606441 718.029443725724 114.32 0.69583 114.32 114 114.7 0 374 49 10 0 0 0 4.2167E-07 2 72417 86.488 82.626 1 0.75924 0.85165 0 66260000 35079000 31181000 39343 387 14822 15225 61721;61722 61721 VVLLGEFLHPCEDDIVCK 18 1 0 Unmodified _VVLLGEFLHPCEDDIVCK_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 715.3582 3 715.023592 2142.04895 70563.98 0.52418 0.0003748 -0.17826 -0.00012746 0.34592 0.00024734 715.358194223304 718.029407088135 113.56 0.87619 113.56 113.06 113.94 0 386 62 11 0 0 0 1.3806E-06 3 73688 84.14 80.901 1 0.74091 0.83071 0 79134000 46651000 32484000 39344 387 14822 15225 61723;61724;61725 61723 VVLLGEFLHPCEDDIVCK 18 1 0 Unmodified _VVLLGEFLHPCEDDIVCK_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.0293 3 715.023592 2142.04895 70486.91 0.8443 0.0006037 -0.25175 -0.00018001 0.59255 0.00042369 715.357882071661 718.029255618802 125.04 0.77136 125.04 124.72 125.49 0 242 31 12 0 0 0 3.7918E-06 2 74993 78.234 78.234 1 0.56357 0.45626 0 23505000 15154000 8350900 39345 387 14822 15225 61726;61727 61727 VVLLGEFLHPCEDDIVCK 18 1 0 Unmodified _VVLLGEFLHPCEDDIVCK_ 0 0 0 A0A024RDJ3;Q9NY12 A0A024RDJ3 A0A024RDJ3 NOLA1;GAR1 H/ACA ribonucleoprotein complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.0297 3 715.023592 2142.04895 70678.88 0.80937 0.00057872 -0.03169 -2.2659E-05 0.77768 0.00055606 715.023856233571 717.69511385363 124.86 0.91417 124.86 124.51 125.42 0 278 41 11 0 0 0 6.7413E-06 2 73961 71.558 67.838 1 0.60112 0.49072 0 26155000 16044000 10111000 39346 387 14822 15225 61728;61729 61729 VVLLHGPPGTGK 12 1 0 Unmodified _VVLLHGPPGTGK_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 394.9074 3 392.236274 1173.68699 94153.55 0.43637 0.00017116 -0.14983 -5.8767E-05 0.28655 0.00011239 392.236212129718 394.907595672096 45.368 0.86103 45.368 45.048 45.909 0 230 74 7 0 0 0 0.001335 2 24387 48.948 48.948 1 2.0781 2.2653 0 49824000 12913000 36911000 39347 1763 14823 15226 61730;61731 61730 VVLLHGPPGTGK 12 1 0 Unmodified _VVLLHGPPGTGK_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 591.8584 2 587.850773 1173.68699 81348.96 0.99041 0.00058221 -0.40592 -0.00023862 0.58449 0.00034359 587.850564353852 591.857548468632 43.676 0.35333 43.676 43.53 43.883 0 63 26 4 0 0 0 0.00071247 1 23746 66.92 58.457 1 1.7116 1.7362 0 12869000 4799600 8069100 39348 1763 14823 15226 61732 61732 VVLLTGETSTDLK 13 1 0 Unmodified _VVLLTGETSTDLK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.3954 2 688.387582 1374.76061 73505.61 0.54941 0.00037821 0.38514 0.00026513 0.93455 0.00064333 688.387548997394 692.395388133928 80.951 1.0023 80.951 80.664 81.666 0 273 85 5 0 0 0 9.5254E-09 1 48179 115.57 107.65 1 1.018 1.1449 0 71346000 32851000 38496000 39349 1411 14824 15227 61733 61733 VVLLTGETSTDLK 13 1 0 Unmodified _VVLLTGETSTDLK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.3951 2 688.387582 1374.76061 73273.55 0.7783 0.00053577 0.7898 0.00054369 1.5681 0.0010795 688.388368609685 692.39504380336 79.974 0.97131 79.974 79.533 80.504 -7.6294E-06 286 77 5 0 0 0 8.9602E-06 1 48702 101.38 92.422 1 1.0478 1.175 0 78816000 46050000 32766000 39350 1411 14824 15227 61734 61734 VVLLTGETSTDLK 13 1 0 Unmodified _VVLLTGETSTDLK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.3953 2 688.387582 1374.76061 73099.5 0.54535 0.00037541 -0.12213 -8.4071E-05 0.42322 0.00029134 688.387372199088 692.394269276671 92.791 0.69805 92.791 92.389 93.087 0 190 40 6 0 0 0 0.00013091 2 51611 79.659 79.659 1 0.99298 0.78637 0 6290500 3524300 2766200 39351 1411 14824 15227 61735;61736 61735 VVLLTGETSTDLK 13 1 0 Unmodified _VVLLTGETSTDLK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.3875 2 688.387582 1374.76061 73460.31 0.29138 0.00020058 -0.11408 -7.8528E-05 0.17731 0.00012206 688.387507214115 692.394323654197 92.581 0.83416 92.581 92.17 93.004 0 191 46 6 0 0 0 0.00028037 2 50708 66.595 66.595 1 0.99915 0.81499 0 6431500 3163600 3267900 39352 1411 14824 15227 61737;61738 61738 VVLPIEAPIR 10 0 1 Unmodified _VVLPIEAPIR_ 0 0 0 A0A0E3JSF1;A0A0E3JG40;D3WYY8;Q14XT3;X2D546;X2D544;X2D537;X2D4V5;X2D4V3;X2D4U5;X2D4U2;X2D4K6;X2D4F2;X2D4E2;X2D4D6;X2D3Z8;X2D3Z7;X2D3Z6;K7WG81;H9E7F7;A0A059QM31;H9E7P8;A0A059RTG7;A0A059QNV4;E2DTL8;A0A1B1PEQ8;H9E7W2;G3CA49;K7WVJ5;H9E7T7;X5C6M5;X5BKA4;X2CK15;X2C841;W8DFH5;W8DBX9;W8D4U9;W8D1X2;V9K571;V9JPM6;V9JD22;V9J3S1;U5Z9R9;U5Z487;U3LSI8;U3L556;T1SWS8;T1Q632;S4STI1;R9Y478;R9Y412;Q9B2U8;Q9B138;Q8WCW3;Q8HNR6;Q8HNR1;Q85KS0;Q7YEH2;Q7YCE6;Q7Y6N0;Q7Y6M3;Q7Y626;Q6VJJ3;Q6VJD8;Q6VIG7;Q6RQ80;Q6RNN7;Q6RKW8;Q6R0V6;Q5XRW8;Q5SB08;Q5SAP1;Q5SA98;Q5S971;Q4GW12;Q4GVP5;Q4GQP0;Q4GHE1;Q4GCZ4;Q4GCG2;Q4GCC3;Q4F4V6;Q4EZD4;Q305H0;Q19MP7;Q15HH9;Q0Z7S0;Q0Z7K3;Q0Z7J0;Q0Z7F1;Q0Z7D8;Q09U41;Q06TE6;N0BMC4;L7XQ86;L7XMG0;L7NVC9;K9M370;K7X9X2;J7HPF9;J7FG21;I6UIH6;I6PZI4;I6PRP7;I6N6Q6;I3Q4M2;I3PYD8;I2E7Z7;H9T3W9;H9SA70;H9S868;H9S5Y2;H9S054;H9RV93;H9RKS9;H9RJL3;H9RF01;H9RD12;H9RAX1;H9RA87;H9QLC8;H9QH59;H9Q9T5;H9PWQ9;H9PMX8;H9PDV6;H9MK30;H9M675;H9LMC2;H9E7D1;G9LKX8;G9LHJ5;G9LG51;G9LB98;G8JF18;G8JE99;G5D8Q5;G5D8N2;G5D8K6;G5D8J3;G5D8C8;G5D863;G4W3U1;G4W3M6;F2WJ84;F2WI31;F2WGV2;F1CIN6;F1AZF2;F1AZ87;E9P659;E7E4E0;E7CNQ9;E7CM18;E5FWC0;E5EWR3;E5EWL4;E5EWG2;E5E1V1;E5E1A6;E5E079;E5DZN4;E2JFC4;E0AF97;D2IKF4;D1G421;C8YBL1;C8Y3Q5;C8Y3G4;C8XWJ6;C5H6M8;C5H6M7;C5H6M5;C5H6M4;C5H6M3;C5H6L3;C5H6K7;C5H6K6;C5H6K5;B5M7M0;B3GUF3;B3DE06;B2XP28;B2XL43;B2XIR3;B2XHT9;B2WRY8;B2CB37;B1W855;A7LFA2;A7LF11;A6ZHA9;A6ZFK3;A6ZF47;A6ZEU4;A6Z3M5;A1Z455;A0SA07;A0S3T1;A0S2P1;A0A1S6N0P5;A0A1S6M799;A0A1L7NY43;A0A1L1ZJP0;A0A1J0QNY7;A0A1J0QL53;A0A1J0PNZ2;A0A1I9S095;A0A1B1PEN9;A0A1B0W3A7;A0A1B0W1P0;A0A1B0W0T5;A0A1B0VYS2;A0A143G082;A0A143FZ56;A0A0R6NEC0;A0A0P0C1B5;A0A0N6YNR7;A0A0D4WSL8;A0A0D4WR75;A0A0D4WQL7;A0A0D3MLN1;A0A0B5E697;A0A097Q0T5;A0A097PWY7;A0A097PWR7;A0A068IXK4;A0A068BY99;A0A059SAH5;A0A059S8A4;A0A059S2S6;A0A059S242;A0A059RZV1;A0A059RX67;A0A059RVU8;A0A059RUP9;A0A059RTZ6;A0A059RSL1;A0A059RRR2;A0A059RRG1;A0A059RR09;A0A059RQT0;A0A059RQQ2;A0A059RQI1;A0A059RQ10;A0A059RPV8;A0A059RP05;A0A059RNV8;A0A059RNF8;A0A059RMK0;A0A059RLH3;A0A059RKX5;A0A059RKP1;A0A059RJF0;A0A059RIZ2;A0A059RIQ8;A0A059RI85;A0A059RI53;A0A059RHY7;A0A059RHR2;A0A059RFY4;A0A059R1T0;A0A059QVH0;A0A059QTW9;A0A059QS59;A0A059QQA7;A0A059QPY9;A0A059QPU3;A0A059QPT6;A0A059QPR4;A0A059QPE9;A0A059QPE7;A0A059QLX8;A0A059QI72;A0A023QZ25;A0A1B0W1E4;A0A059RUZ1;H9STE0;P00403;B2YKU2;V9J3C6;V9J128;A6YW54;A0A059RIK5 A0A0E3JSF1 A0A0E3JSF1 cox2;COX2;COII;MT-CO2 Cytochrome c oxidase subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.855 2 553.850242 1105.68593 80944.84 0.72122 0.00039945 -0.0048763 -2.7008E-06 0.71634 0.00039674 553.850140924889 558.854303049568 103.51 0.8468 103.51 103.17 104.02 0 393 69 8 0 0 0 0.0023645 3 63693 69.423 69.423 1 1.1925 1.4092 0 254480000 119980000 134490000 39353 530 14825 15228 61739;61740;61741 61739 VVLPIEAPIR 10 0 1 Unmodified _VVLPIEAPIR_ 0 0 0 A0A0E3JSF1;A0A0E3JG40;D3WYY8;Q14XT3;X2D546;X2D544;X2D537;X2D4V5;X2D4V3;X2D4U5;X2D4U2;X2D4K6;X2D4F2;X2D4E2;X2D4D6;X2D3Z8;X2D3Z7;X2D3Z6;K7WG81;H9E7F7;A0A059QM31;H9E7P8;A0A059RTG7;A0A059QNV4;E2DTL8;A0A1B1PEQ8;H9E7W2;G3CA49;K7WVJ5;H9E7T7;X5C6M5;X5BKA4;X2CK15;X2C841;W8DFH5;W8DBX9;W8D4U9;W8D1X2;V9K571;V9JPM6;V9JD22;V9J3S1;U5Z9R9;U5Z487;U3LSI8;U3L556;T1SWS8;T1Q632;S4STI1;R9Y478;R9Y412;Q9B2U8;Q9B138;Q8WCW3;Q8HNR6;Q8HNR1;Q85KS0;Q7YEH2;Q7YCE6;Q7Y6N0;Q7Y6M3;Q7Y626;Q6VJJ3;Q6VJD8;Q6VIG7;Q6RQ80;Q6RNN7;Q6RKW8;Q6R0V6;Q5XRW8;Q5SB08;Q5SAP1;Q5SA98;Q5S971;Q4GW12;Q4GVP5;Q4GQP0;Q4GHE1;Q4GCZ4;Q4GCG2;Q4GCC3;Q4F4V6;Q4EZD4;Q305H0;Q19MP7;Q15HH9;Q0Z7S0;Q0Z7K3;Q0Z7J0;Q0Z7F1;Q0Z7D8;Q09U41;Q06TE6;N0BMC4;L7XQ86;L7XMG0;L7NVC9;K9M370;K7X9X2;J7HPF9;J7FG21;I6UIH6;I6PZI4;I6PRP7;I6N6Q6;I3Q4M2;I3PYD8;I2E7Z7;H9T3W9;H9SA70;H9S868;H9S5Y2;H9S054;H9RV93;H9RKS9;H9RJL3;H9RF01;H9RD12;H9RAX1;H9RA87;H9QLC8;H9QH59;H9Q9T5;H9PWQ9;H9PMX8;H9PDV6;H9MK30;H9M675;H9LMC2;H9E7D1;G9LKX8;G9LHJ5;G9LG51;G9LB98;G8JF18;G8JE99;G5D8Q5;G5D8N2;G5D8K6;G5D8J3;G5D8C8;G5D863;G4W3U1;G4W3M6;F2WJ84;F2WI31;F2WGV2;F1CIN6;F1AZF2;F1AZ87;E9P659;E7E4E0;E7CNQ9;E7CM18;E5FWC0;E5EWR3;E5EWL4;E5EWG2;E5E1V1;E5E1A6;E5E079;E5DZN4;E2JFC4;E0AF97;D2IKF4;D1G421;C8YBL1;C8Y3Q5;C8Y3G4;C8XWJ6;C5H6M8;C5H6M7;C5H6M5;C5H6M4;C5H6M3;C5H6L3;C5H6K7;C5H6K6;C5H6K5;B5M7M0;B3GUF3;B3DE06;B2XP28;B2XL43;B2XIR3;B2XHT9;B2WRY8;B2CB37;B1W855;A7LFA2;A7LF11;A6ZHA9;A6ZFK3;A6ZF47;A6ZEU4;A6Z3M5;A1Z455;A0SA07;A0S3T1;A0S2P1;A0A1S6N0P5;A0A1S6M799;A0A1L7NY43;A0A1L1ZJP0;A0A1J0QNY7;A0A1J0QL53;A0A1J0PNZ2;A0A1I9S095;A0A1B1PEN9;A0A1B0W3A7;A0A1B0W1P0;A0A1B0W0T5;A0A1B0VYS2;A0A143G082;A0A143FZ56;A0A0R6NEC0;A0A0P0C1B5;A0A0N6YNR7;A0A0D4WSL8;A0A0D4WR75;A0A0D4WQL7;A0A0D3MLN1;A0A0B5E697;A0A097Q0T5;A0A097PWY7;A0A097PWR7;A0A068IXK4;A0A068BY99;A0A059SAH5;A0A059S8A4;A0A059S2S6;A0A059S242;A0A059RZV1;A0A059RX67;A0A059RVU8;A0A059RUP9;A0A059RTZ6;A0A059RSL1;A0A059RRR2;A0A059RRG1;A0A059RR09;A0A059RQT0;A0A059RQQ2;A0A059RQI1;A0A059RQ10;A0A059RPV8;A0A059RP05;A0A059RNV8;A0A059RNF8;A0A059RMK0;A0A059RLH3;A0A059RKX5;A0A059RKP1;A0A059RJF0;A0A059RIZ2;A0A059RIQ8;A0A059RI85;A0A059RI53;A0A059RHY7;A0A059RHR2;A0A059RFY4;A0A059R1T0;A0A059QVH0;A0A059QTW9;A0A059QS59;A0A059QQA7;A0A059QPY9;A0A059QPU3;A0A059QPT6;A0A059QPR4;A0A059QPE9;A0A059QPE7;A0A059QLX8;A0A059QI72;A0A023QZ25;A0A1B0W1E4;A0A059RUZ1;H9STE0;P00403;B2YKU2;V9J3C6;V9J128;A6YW54;A0A059RIK5 A0A0E3JSF1 A0A0E3JSF1 cox2;COX2;COII;MT-CO2 Cytochrome c oxidase subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.8499 2 553.850242 1105.68593 81660.48 0.88248 0.00048876 0.016291 9.0225E-06 0.89877 0.00049778 553.850182837835 558.85431469756 102.72 0.84135 102.72 102.38 103.23 0 379 66 8 0 0 0 0.0007117 2 64726 82.452 82.452 1 1.162 1.3477 0 316910000 147490000 169420000 39354 530 14825 15228 61742;61743 61743 VVLPIEAPIR 10 0 1 Unmodified _VVLPIEAPIR_ 0 0 0 A0A0E3JSF1;A0A0E3JG40;D3WYY8;Q14XT3;X2D546;X2D544;X2D537;X2D4V5;X2D4V3;X2D4U5;X2D4U2;X2D4K6;X2D4F2;X2D4E2;X2D4D6;X2D3Z8;X2D3Z7;X2D3Z6;K7WG81;H9E7F7;A0A059QM31;H9E7P8;A0A059RTG7;A0A059QNV4;E2DTL8;A0A1B1PEQ8;H9E7W2;G3CA49;K7WVJ5;H9E7T7;X5C6M5;X5BKA4;X2CK15;X2C841;W8DFH5;W8DBX9;W8D4U9;W8D1X2;V9K571;V9JPM6;V9JD22;V9J3S1;U5Z9R9;U5Z487;U3LSI8;U3L556;T1SWS8;T1Q632;S4STI1;R9Y478;R9Y412;Q9B2U8;Q9B138;Q8WCW3;Q8HNR6;Q8HNR1;Q85KS0;Q7YEH2;Q7YCE6;Q7Y6N0;Q7Y6M3;Q7Y626;Q6VJJ3;Q6VJD8;Q6VIG7;Q6RQ80;Q6RNN7;Q6RKW8;Q6R0V6;Q5XRW8;Q5SB08;Q5SAP1;Q5SA98;Q5S971;Q4GW12;Q4GVP5;Q4GQP0;Q4GHE1;Q4GCZ4;Q4GCG2;Q4GCC3;Q4F4V6;Q4EZD4;Q305H0;Q19MP7;Q15HH9;Q0Z7S0;Q0Z7K3;Q0Z7J0;Q0Z7F1;Q0Z7D8;Q09U41;Q06TE6;N0BMC4;L7XQ86;L7XMG0;L7NVC9;K9M370;K7X9X2;J7HPF9;J7FG21;I6UIH6;I6PZI4;I6PRP7;I6N6Q6;I3Q4M2;I3PYD8;I2E7Z7;H9T3W9;H9SA70;H9S868;H9S5Y2;H9S054;H9RV93;H9RKS9;H9RJL3;H9RF01;H9RD12;H9RAX1;H9RA87;H9QLC8;H9QH59;H9Q9T5;H9PWQ9;H9PMX8;H9PDV6;H9MK30;H9M675;H9LMC2;H9E7D1;G9LKX8;G9LHJ5;G9LG51;G9LB98;G8JF18;G8JE99;G5D8Q5;G5D8N2;G5D8K6;G5D8J3;G5D8C8;G5D863;G4W3U1;G4W3M6;F2WJ84;F2WI31;F2WGV2;F1CIN6;F1AZF2;F1AZ87;E9P659;E7E4E0;E7CNQ9;E7CM18;E5FWC0;E5EWR3;E5EWL4;E5EWG2;E5E1V1;E5E1A6;E5E079;E5DZN4;E2JFC4;E0AF97;D2IKF4;D1G421;C8YBL1;C8Y3Q5;C8Y3G4;C8XWJ6;C5H6M8;C5H6M7;C5H6M5;C5H6M4;C5H6M3;C5H6L3;C5H6K7;C5H6K6;C5H6K5;B5M7M0;B3GUF3;B3DE06;B2XP28;B2XL43;B2XIR3;B2XHT9;B2WRY8;B2CB37;B1W855;A7LFA2;A7LF11;A6ZHA9;A6ZFK3;A6ZF47;A6ZEU4;A6Z3M5;A1Z455;A0SA07;A0S3T1;A0S2P1;A0A1S6N0P5;A0A1S6M799;A0A1L7NY43;A0A1L1ZJP0;A0A1J0QNY7;A0A1J0QL53;A0A1J0PNZ2;A0A1I9S095;A0A1B1PEN9;A0A1B0W3A7;A0A1B0W1P0;A0A1B0W0T5;A0A1B0VYS2;A0A143G082;A0A143FZ56;A0A0R6NEC0;A0A0P0C1B5;A0A0N6YNR7;A0A0D4WSL8;A0A0D4WR75;A0A0D4WQL7;A0A0D3MLN1;A0A0B5E697;A0A097Q0T5;A0A097PWY7;A0A097PWR7;A0A068IXK4;A0A068BY99;A0A059SAH5;A0A059S8A4;A0A059S2S6;A0A059S242;A0A059RZV1;A0A059RX67;A0A059RVU8;A0A059RUP9;A0A059RTZ6;A0A059RSL1;A0A059RRR2;A0A059RRG1;A0A059RR09;A0A059RQT0;A0A059RQQ2;A0A059RQI1;A0A059RQ10;A0A059RPV8;A0A059RP05;A0A059RNV8;A0A059RNF8;A0A059RMK0;A0A059RLH3;A0A059RKX5;A0A059RKP1;A0A059RJF0;A0A059RIZ2;A0A059RIQ8;A0A059RI85;A0A059RI53;A0A059RHY7;A0A059RHR2;A0A059RFY4;A0A059R1T0;A0A059QVH0;A0A059QTW9;A0A059QS59;A0A059QQA7;A0A059QPY9;A0A059QPU3;A0A059QPT6;A0A059QPR4;A0A059QPE9;A0A059QPE7;A0A059QLX8;A0A059QI72;A0A023QZ25;A0A1B0W1E4;A0A059RUZ1;H9STE0;P00403;B2YKU2;V9J3C6;V9J128;A6YW54;A0A059RIK5 A0A0E3JSF1 A0A0E3JSF1 cox2;COX2;COII;MT-CO2 Cytochrome c oxidase subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 558.8551 2 553.850242 1105.68593 80700.94 0.86705 0.00048021 -0.16097 -8.9153E-05 0.70608 0.00039106 553.849879200778 558.854251355626 115.45 0.6849 115.45 115.19 115.88 -7.6294E-06 156 31 8 0 0 0 0.0026988 2 67571 67.897 67.897 1 1.4038 1.1478 0 13756000 5334900 8421300 39355 530 14825 15228 61744;61745 61744 VVLPIEAPIR 10 0 1 Unmodified _VVLPIEAPIR_ 0 0 0 A0A0E3JSF1;A0A0E3JG40;D3WYY8;Q14XT3;X2D546;X2D544;X2D537;X2D4V5;X2D4V3;X2D4U5;X2D4U2;X2D4K6;X2D4F2;X2D4E2;X2D4D6;X2D3Z8;X2D3Z7;X2D3Z6;K7WG81;H9E7F7;A0A059QM31;H9E7P8;A0A059RTG7;A0A059QNV4;E2DTL8;A0A1B1PEQ8;H9E7W2;G3CA49;K7WVJ5;H9E7T7;X5C6M5;X5BKA4;X2CK15;X2C841;W8DFH5;W8DBX9;W8D4U9;W8D1X2;V9K571;V9JPM6;V9JD22;V9J3S1;U5Z9R9;U5Z487;U3LSI8;U3L556;T1SWS8;T1Q632;S4STI1;R9Y478;R9Y412;Q9B2U8;Q9B138;Q8WCW3;Q8HNR6;Q8HNR1;Q85KS0;Q7YEH2;Q7YCE6;Q7Y6N0;Q7Y6M3;Q7Y626;Q6VJJ3;Q6VJD8;Q6VIG7;Q6RQ80;Q6RNN7;Q6RKW8;Q6R0V6;Q5XRW8;Q5SB08;Q5SAP1;Q5SA98;Q5S971;Q4GW12;Q4GVP5;Q4GQP0;Q4GHE1;Q4GCZ4;Q4GCG2;Q4GCC3;Q4F4V6;Q4EZD4;Q305H0;Q19MP7;Q15HH9;Q0Z7S0;Q0Z7K3;Q0Z7J0;Q0Z7F1;Q0Z7D8;Q09U41;Q06TE6;N0BMC4;L7XQ86;L7XMG0;L7NVC9;K9M370;K7X9X2;J7HPF9;J7FG21;I6UIH6;I6PZI4;I6PRP7;I6N6Q6;I3Q4M2;I3PYD8;I2E7Z7;H9T3W9;H9SA70;H9S868;H9S5Y2;H9S054;H9RV93;H9RKS9;H9RJL3;H9RF01;H9RD12;H9RAX1;H9RA87;H9QLC8;H9QH59;H9Q9T5;H9PWQ9;H9PMX8;H9PDV6;H9MK30;H9M675;H9LMC2;H9E7D1;G9LKX8;G9LHJ5;G9LG51;G9LB98;G8JF18;G8JE99;G5D8Q5;G5D8N2;G5D8K6;G5D8J3;G5D8C8;G5D863;G4W3U1;G4W3M6;F2WJ84;F2WI31;F2WGV2;F1CIN6;F1AZF2;F1AZ87;E9P659;E7E4E0;E7CNQ9;E7CM18;E5FWC0;E5EWR3;E5EWL4;E5EWG2;E5E1V1;E5E1A6;E5E079;E5DZN4;E2JFC4;E0AF97;D2IKF4;D1G421;C8YBL1;C8Y3Q5;C8Y3G4;C8XWJ6;C5H6M8;C5H6M7;C5H6M5;C5H6M4;C5H6M3;C5H6L3;C5H6K7;C5H6K6;C5H6K5;B5M7M0;B3GUF3;B3DE06;B2XP28;B2XL43;B2XIR3;B2XHT9;B2WRY8;B2CB37;B1W855;A7LFA2;A7LF11;A6ZHA9;A6ZFK3;A6ZF47;A6ZEU4;A6Z3M5;A1Z455;A0SA07;A0S3T1;A0S2P1;A0A1S6N0P5;A0A1S6M799;A0A1L7NY43;A0A1L1ZJP0;A0A1J0QNY7;A0A1J0QL53;A0A1J0PNZ2;A0A1I9S095;A0A1B1PEN9;A0A1B0W3A7;A0A1B0W1P0;A0A1B0W0T5;A0A1B0VYS2;A0A143G082;A0A143FZ56;A0A0R6NEC0;A0A0P0C1B5;A0A0N6YNR7;A0A0D4WSL8;A0A0D4WR75;A0A0D4WQL7;A0A0D3MLN1;A0A0B5E697;A0A097Q0T5;A0A097PWY7;A0A097PWR7;A0A068IXK4;A0A068BY99;A0A059SAH5;A0A059S8A4;A0A059S2S6;A0A059S242;A0A059RZV1;A0A059RX67;A0A059RVU8;A0A059RUP9;A0A059RTZ6;A0A059RSL1;A0A059RRR2;A0A059RRG1;A0A059RR09;A0A059RQT0;A0A059RQQ2;A0A059RQI1;A0A059RQ10;A0A059RPV8;A0A059RP05;A0A059RNV8;A0A059RNF8;A0A059RMK0;A0A059RLH3;A0A059RKX5;A0A059RKP1;A0A059RJF0;A0A059RIZ2;A0A059RIQ8;A0A059RI85;A0A059RI53;A0A059RHY7;A0A059RHR2;A0A059RFY4;A0A059R1T0;A0A059QVH0;A0A059QTW9;A0A059QS59;A0A059QQA7;A0A059QPY9;A0A059QPU3;A0A059QPT6;A0A059QPR4;A0A059QPE9;A0A059QPE7;A0A059QLX8;A0A059QI72;A0A023QZ25;A0A1B0W1E4;A0A059RUZ1;H9STE0;P00403;B2YKU2;V9J3C6;V9J128;A6YW54;A0A059RIK5 A0A0E3JSF1 A0A0E3JSF1 cox2;COX2;COII;MT-CO2 Cytochrome c oxidase subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.8493 2 553.850242 1105.68593 80996.59 0.69439 0.00038459 -0.15816 -8.7599E-05 0.53623 0.00029699 553.849847989746 558.854289300214 115.22 0.65314 115.22 114.96 115.62 0 154 30 8 0 0 0 0.016374 2 66476 48.283 48.283 1 1.4295 1.1986 0 16758000 7217400 9540200 39356 530 14825 15228 61746;61747 61747 VVLPTFILEPR 11 0 1 Unmodified _VVLPTFILEPR_ 0 0 0 F8VUA7;F8VQX7;Q641R2;A0A024RBB8;Q5HYM3;Q9BZF1 F8VUA7 F8VUA7 OSBPL8;DKFZp686C0249 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 647.394 2 642.389731 1282.76491 78970.21 0.69656 0.00044746 -0.63857 -0.00041021 0.057983 3.7248E-05 642.389007836483 647.393653853839 121.64 0.39243 121.64 121.48 121.87 -7.6294E-06 116 29 6 0 0 0 0.0024739 1 80567 61.56 61.56 1 1.395 1.4048 0 6528300 2671800 3856500 39357 333 14826 15229 61748 61748 VVLPTFILER 10 0 1 Unmodified _VVLPTFILER_ 0 0 0 B3KW33;B7Z4Q6;B1AKJ6;Q96SU4 B3KW33 B3KW33 OSBPL9 Oxysterol-binding protein;Oxysterol-binding protein-related protein 9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.868 2 593.863349 1185.71214 NaN NaN NaN 0.22622 0.00013434 NaN NaN NaN NaN 118.87 0.36913 118.87 118.72 119.09 0 0 0 0 0.0014904 1 76367 85.676 76.813 1 NaN NaN 0 7320500 0 7320500 39358 815 14827 15230 61749 61749 VVLPTFILER 10 0 1 Unmodified _VVLPTFILER_ 0 0 0 B3KW33;B7Z4Q6;B1AKJ6;Q96SU4 B3KW33 B3KW33 OSBPL9 Oxysterol-binding protein;Oxysterol-binding protein-related protein 9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 598.8685 2 593.863349 1185.71214 NaN NaN NaN 0.27981 0.00016617 NaN NaN NaN NaN 118.34 0.42554 118.34 118.14 118.57 0 0 0 0 0.00057853 1 77753 90.657 81.069 1 NaN NaN 0 3620600 0 3620600 39359 815 14827 15230 61750 61750 VVLPYLVPK 9 1 0 Unmodified _VVLPYLVPK_ 0 0 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.3311 2 514.331153 1026.64775 NaN NaN NaN -0.16306 -8.3869E-05 NaN NaN NaN NaN 101.97 0.19007 101.97 101.89 102.08 0 0 0 0 0.051865 1 64234 46.426 4.3168 1 NaN NaN 0 4845600 4845600 0 39360 1205 14828 15231 61751 61751 VVLSVSSGGQHTVLLVK 17 1 0 Unmodified _VVLSVSSGGQHTVLLVK_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 577.6801 3 575.0086 1722.00397 80286.11 0.62734 0.00036073 0.3469 0.00019947 0.97424 0.00056019 575.008838147347 577.680219715731 95.331 0.79142 95.331 95.098 95.889 0 278 56 8 0 0 0 2.0206E-05 1 53384 60.307 54.144 1 0.98294 0.79229 0 22308000 11522000 10786000 39361 550 14829 15232 61752 61752 VVLSVSSGGQHTVLLVK 17 1 0 Unmodified _VVLSVSSGGQHTVLLVK_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 866.0168 2 862.009261 1722.00397 65023.9 0.67088 0.0005783 0.26065 0.00022468 0.93153 0.00080298 862.510680912116 866.016554793704 95.353 0.4515 95.353 95.155 95.607 7.6294E-06 131 31 6 0 0 0 0.00011871 1 53410 58.098 54.951 1 1.0427 0.82986 0 9902500 5314700 4587800 39362 550 14829 15232 61753 61753 VVLSVSSGGQHTVLLVK 17 1 0 Unmodified _VVLSVSSGGQHTVLLVK_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.0097 3 575.0086 1722.00397 81500.29 0.42918 0.00024678 0.64374 0.00037015 1.0729 0.00061694 575.009058729122 577.680568651881 95.222 0.58322 95.222 94.844 95.427 0 195 41 7 0 0 0 0.0021602 2 52403 25.198 25.198 1 1.0017 0.84957 0 66222000 34523000 31699000 39363 550 14829 15232 61754;61755 61754 VVLVLAGR 8 0 1 Unmodified _VVLVLAGR_ 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ERY7 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.7791 2 413.779088 825.543623 92267.38 0.17948 7.4263E-05 9.6407E-05 3.9891E-08 0.17957 7.4303E-05 413.779028571972 418.783095274575 71.477 2.0321 71.477 70.78 72.812 0 767 162 8 0 0 0 0.00096961 4 42012 122.15 82.193 1 0.91402 1.0815 0 327560000 172970000 154590000 39364 93 14830 15233 61756;61757;61758;61759 61759 VVLVLAGR 8 0 1 Unmodified _VVLVLAGR_ 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ERY7 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 413.7789 2 413.779088 825.543623 91118.88 0.17612 7.2875E-05 -0.13183 -5.4549E-05 0.044289 1.8326E-05 413.779003335902 418.783010800677 70.171 1.9444 70.171 69.433 71.378 0 706 155 8 0 0 0 0.0010031 4 42148 117.7 77.013 1 0.87381 1.0213 0 588560000 321290000 267270000 39365 93 14830 15233 61760;61761;61762;61763 61762 VVLVLAGR 8 0 1 Unmodified _VVLVLAGR_ 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ERY7 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 413.7789 2 413.779088 825.543623 93121.71 -0.25981 -0.0001075 0.35478 0.0001468 0.094972 3.9297E-05 413.779149870297 418.783212402197 80.855 1.9809 80.855 80.428 82.408 0 591 124 8 0 0 0 0.015836 4 44126 61.494 42.539 1 0.76191 0.65027 0 37583000 19423000 18160000 39366 93 14830 15233 61764;61765;61766;61767 61767 VVLVLAGR 8 0 1 Unmodified _VVLVLAGR_ 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ERY7 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 413.7791 2 413.779088 825.543623 93872.86 -0.19664 -8.1364E-05 0.37065 0.00015337 0.17402 7.2005E-05 413.779158893454 418.783225535122 81.029 2.2795 81.029 80.549 82.828 0 564 139 7 0 0 0 0.031924 2 43261 50.966 34.812 1 0.75622 0.65964 0 33684000 18761000 14924000 39367 93 14830 15233 61768;61769 61768 VVMALGDYMGASCHACIGGTNVR 23 0 1 2 Oxidation (M) _VVM(ox)ALGDYM(ox)GASCHACIGGTNVR_ VVM(1)ALGDYM(1)GASCHACIGGTNVR VVM(60.13)ALGDYM(60.13)GASCHACIGGTNVR 0 2 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 827.7065 3 824.369328 2470.08615 NaN NaN NaN -0.72695 -0.00059927 NaN NaN NaN NaN 66.118 0.78915 66.118 65.705 66.494 0 0 0 0 1.3913E-07 1 37958 60.133 57.484 1 NaN NaN 0 15950000 0 15950000 39368 770 14831 15234 61770 61770 603;604 VVMALGDYMGASCHACIGGTNVR 23 0 1 2 Oxidation (M) _VVM(ox)ALGDYM(ox)GASCHACIGGTNVR_ VVM(1)ALGDYM(1)GASCHACIGGTNVR VVM(76.02)ALGDYM(76.02)GASCHACIGGTNVR 0 2 0 A8K7F6;P60842;A8K088;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3QKZ9;B4E047;J3KS25 A8K7F6 A8K7F6 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.3737 3 824.369328 2470.08615 67015.42 0.63634 0.00052458 -0.76464 -0.00063035 -0.1283 -0.00010577 824.703684429215 828.039583426754 64.862 0.81258 64.862 64.511 65.324 -7.6294E-06 267 68 8 0 0 0 1.4041E-09 2 38076 76.015 76.015 1 4.2802 4.6171 0 26260000 6078100 20182000 39369 770 14831 15234 61771;61772 61772 603;604 VVNAVLTQIDQIK 13 1 0 Unmodified _VVNAVLTQIDQIK_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.9317 2 720.924666 1439.83478 72283.34 0.6151 0.00044344 0.30704 0.00022135 0.92214 0.0006648 720.924835729669 724.931847183752 99.608 0.75407 99.608 99.401 100.15 7.6294E-06 340 63 7 0 0 0 2.0943E-13 2 60956 129 107.43 1 1.7327 1.896 0 51791000 19059000 32732000 39370 1763 14832 15235 61773;61774 61774 VVNAVLTQIDQIK 13 1 0 Unmodified _VVNAVLTQIDQIK_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.9357 2 720.924666 1439.83478 72290.8 0.72524 0.00052285 0.22473 0.00016201 0.94997 0.00068486 720.92475068062 724.931822295322 99.055 0.88282 99.055 98.616 99.499 0 352 74 7 0 0 0 1.6145E-06 2 61832 110.66 95.982 1 1.6723 1.8833 0 58144000 22818000 35325000 39371 1763 14832 15235 61775;61776 61775 VVNAVLTQIDQIK 13 1 0 Unmodified _VVNAVLTQIDQIK_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.3602 2 720.924666 1439.83478 71910.2 1.0402 0.00074992 -0.63813 -0.00046004 0.40209 0.00028988 720.924213944032 724.931408072597 112.71 0.45956 112.71 112.47 112.93 0 106 22 7 0 0 0 0.013703 1 65473 58.172 46.817 1 1.1669 0.93007 0 9680100 4695100 4985000 39372 1763 14832 15235 61777 61777 VVNAVLTQIDQIK 13 1 0 Unmodified _VVNAVLTQIDQIK_ 0 0 0 Q15645 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.4268 2 720.924666 1439.83478 73077.51 0.771 0.00055584 -0.3302 -0.00023805 0.4408 0.00031778 720.924013066157 724.931766083746 112.48 0.51625 112.48 112.27 112.78 0 126 26 7 0 0 0 0.00015572 2 64370 72.652 69.15 1 1.222 1.0031 0 9193400 4426500 4766900 39373 1763 14832 15235 61778;61779 61779 VVNDEEVVR 9 0 1 Unmodified _VVNDEEVVR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.78 2 529.77747 1057.54039 NaN NaN NaN -2.1818 -0.0011559 NaN NaN NaN NaN 28.302 0.23663 28.302 28.203 28.44 -1.9073E-06 0 0 0 3.6578E-05 1 13520 105.57 82.828 1 NaN NaN 0 34507000 0 34507000 39374 1412 14833 15236 61780 61780 VVNGPEILNK 10 1 0 Unmodified _VVNGPEILNK_ 0 0 0 I3L0N3;B7Z5J7;P46459;B7Z9U2;B4DH19;B4DSK5;B4DGR3 I3L0N3 I3L0N3 NSF Vesicle-fusing ATPase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.8215 2 541.813856 1081.61316 NaN NaN NaN -0.041393 -2.2427E-05 NaN NaN NaN NaN 51.908 0.39982 51.908 51.741 52.141 0 0 0 0 0.013857 1 28841 59.35 41.53 1 NaN NaN 0 9660400 0 9660400 39375 1096 14834 15237 61781 61781 VVNIVPVIAK 10 1 0 Unmodified _VVNIVPVIAK_ 0 0 0 A0A0S2Z5W9;A0A024R8Q0;A0A0S2Z5A5;A0A024R8V0;Q9UHD8;K7EK18;K7EL40 A0A0S2Z5W9 A0A0S2Z5W9 SEPT9 Septin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.3552 2 526.347335 1050.68012 87166.1 0.54233 0.00028546 -0.23273 -0.0001225 0.3096 0.00016296 526.347296823712 530.35426420177 93.362 0.42087 93.362 93.177 93.598 0 87 34 5 0 0 0 0.0051169 2 56704 60.59 60.59 1 1.8251 1.9097 0 11999000 3530700 8468300 39376 254 14835 15238 61782;61783 61783 VVNIVPVIAK 10 1 0 Unmodified _VVNIVPVIAK_ 0 0 0 A0A0S2Z5W9;A0A024R8Q0;A0A0S2Z5A5;A0A024R8V0;Q9UHD8;K7EK18;K7EL40 A0A0S2Z5W9 A0A0S2Z5W9 SEPT9 Septin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.3547 2 526.347335 1050.68012 93157.48 0.46661 0.0002456 -0.19652 -0.00010344 0.27009 0.00014216 526.347354461133 530.354314077095 92.424 0.40905 92.424 92.215 92.624 0 79 35 4 0 0 0 0.0011608 1 57238 75.213 71.466 1 1.8684 1.9076 0 9296300 4681000 4615300 39377 254 14835 15238 61784 61784 VVNLAVDK 8 1 0 Unmodified _VVNLAVDK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 429.2581 2 429.258185 856.501818 88918.53 0.22228 9.5418E-05 -0.77076 -0.00033086 -0.54848 -0.00023544 429.258084513372 433.265151425169 41.506 0.75964 41.506 41.171 41.93 0 223 62 8 0 0 0 0.015121 2 21779 61.962 27.588 1 0.91667 1.0343 0 133530000 69807000 63723000 39378 1827 14836 15239 61785;61786 61786 VVNLAVDK 8 1 0 Unmodified _VVNLAVDK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 429.2581 2 429.258185 856.501818 90310.88 -0.13176 -5.6561E-05 -0.40452 -0.00017364 -0.53629 -0.0002302 429.258449289439 433.265233931659 40.455 0.68953 40.455 40.124 40.813 0 235 55 7 0 0 0 0.011488 3 21543 69.812 32.653 1 0.89487 1.0443 0 267280000 138520000 128770000 39379 1827 14836 15239 61787;61788;61789 61789 VVNLAVDK 8 1 0 Unmodified _VVNLAVDK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 433.2652 2 429.258185 856.501818 90993.48 -0.39761 -0.00017068 -0.28483 -0.00012226 -0.68243 -0.00029294 429.25829623854 433.265348798411 46.979 0.73557 46.979 46.68 47.415 0 267 56 8 0 0 0 0.033338 1 22635 50.04 20.891 1 1.3587 1.055 0 14653000 6141600 8511700 39380 1827 14836 15239 61790 61790 VVNLGVLAQK 10 1 0 Unmodified _VVNLGVLAQK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.8339 2 520.826766 1039.63898 83539.91 0.22877 0.00011915 -0.27194 -0.00014164 -0.043175 -2.2487E-05 520.826761725561 524.833862211185 77.744 1.0632 77.744 77.174 78.237 0 421 85 8 0 0 0 1.9464E-08 2 45820 121.99 108.95 1 0.92208 1.0412 0 80785000 43853000 36932000 39381 486 14837 15240 61791;61792 61791 VVNLGVLAQK 10 1 0 Unmodified _VVNLGVLAQK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.8345 2 520.826766 1039.63898 83971.31 0.085839 4.4707E-05 -0.036763 -1.9147E-05 0.049076 2.556E-05 520.82684061681 524.833912696807 76.583 1.2749 76.583 75.998 77.273 0 394 104 7 0 0 0 4.4037E-08 2 46113 117.04 99.64 1 0.95673 1.069 0 91948000 51915000 40032000 39382 486 14837 15240 61793;61794 61793 VVNLGVLAQK 10 1 0 Unmodified _VVNLGVLAQK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.8339 2 520.826766 1039.63898 83632.78 0.53822 0.00028032 -0.2399 -0.00012495 0.29832 0.00015537 520.826639338584 524.833752284408 88.805 1.3719 88.805 88.158 89.53 0 415 87 8 0 0 0 1.0124E-05 2 48835 105.14 84.511 1 1.285 1.0316 0 21384000 9392100 11992000 39383 486 14837 15240 61795;61796 61796 VVNLGVLAQK 10 1 0 Unmodified _VVNLGVLAQK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 524.8342 2 520.826766 1039.63898 83525.14 0.15158 7.8946E-05 0.32196 0.00016769 0.47354 0.00024663 520.826945786493 524.833987615929 88.672 1.1211 88.671 88.137 89.258 -7.6294E-06 379 66 9 0 0 0 0.0038711 2 47947 62.546 57.065 1 1.2583 1.0093 0 18814000 7940600 10873000 39384 486 14837 15240 61797;61798 61797 VVNPLFEK 8 1 0 Unmodified _VVNPLFEK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.2808 2 473.273835 944.533118 88367.83 0.26319 0.00012456 0.051691 2.4464E-05 0.31488 0.00014903 473.273825615444 477.280832917014 67.645 1.8036 67.645 67.009 68.812 0 845 153 10 0 0 0 0.0036078 4 38834 96.253 9.2994 1 0.90595 1.0785 0 629810000 341270000 288540000 39385 1648 14838 15241 61799;61800;61801;61802 61800 VVNPLFEK 8 1 0 Unmodified _VVNPLFEK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 473.2737 2 473.273835 944.533118 88125.73 0.10281 4.8659E-05 -0.074145 -3.5091E-05 0.028668 1.3568E-05 473.273738196251 477.280789287867 66.146 1.6487 66.146 65.726 67.375 0 774 138 9 0 0 0 0.0070775 4 39378 84.498 7.2319 1 0.90523 1.0667 0 582100000 293600000 288490000 39386 1648 14838 15241 61803;61804;61805;61806 61806 VVNPLFEK 8 1 0 Unmodified _VVNPLFEK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 477.2809 2 473.273835 944.533118 87311.94 0.097081 4.5946E-05 0.15501 7.3361E-05 0.25209 0.00011931 473.273800185614 477.280891732255 76.894 1.9343 76.894 76.459 78.393 0 570 129 8 0 0 0 0.014196 1 41346 63.565 7.889 1 0.79928 0.6572 0 39024000 21788000 17236000 39387 1648 14838 15241 61807 61807 VVNPLFEK 8 1 0 Unmodified _VVNPLFEK_ 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 473.2737 2 473.273835 944.533118 87580.59 0.26576 0.00012578 0.084417 3.9952E-05 0.35018 0.00016573 473.273745515819 477.280858468243 76.999 2.0887 76.999 76.614 78.702 0 573 138 8 0 0 0 0.015065 1 40659 61.999 8.8329 1 0.8202 0.67845 0 32852000 17578000 15273000 39388 1648 14838 15241 61808 61808 VVNQLLTEMDGLEAR 15 0 1 Oxidation (M) _VVNQLLTEM(ox)DGLEAR_ VVNQLLTEM(1)DGLEAR VVNQLLTEM(44.85)DGLEAR 0 1 0 B4DLM8;O15381 B4DLM8 B4DLM8 NVL Nuclear valosin-containing protein-like MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 857.4408 2 852.435269 1702.85598 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.25 1 82.25 81.75 82.75 7.6294E-06 0 0 0 0.0059085 1 49107 44.847 29.46 1 39389 997 14839 15242 61809 61809 786 VVPEMTEILK 10 1 0 Oxidation (M) _VVPEM(ox)TEILK_ VVPEM(1)TEILK VVPEM(57.86)TEILK 0 1 0 A0A0S2Z3L0;P13804;A0A0S2Z3M4;H0YK49;H0YL83 A0A0S2Z3L0 A0A0S2Z3L0 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.8314 2 587.823032 1173.63151 NaN NaN NaN -0.019676 -1.1566E-05 NaN NaN NaN NaN 60.627 0.63729 60.627 60.398 61.035 3.8147E-06 0 0 0 0.0047653 1 34544 57.859 32.122 1 NaN NaN 0 8601200 0 8601200 39390 553 14840 15243 61810 61810 407 VVPIASLTPYQSK 13 1 0 Unmodified _VVPIASLTPYQSK_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.9003 2 701.90066 1401.78677 74138.16 0.74148 0.00052044 0.79815 0.00056022 1.5396 0.0010807 701.900692544754 705.908543209373 88.918 0.56877 88.918 88.494 89.063 0 122 41 5 0 0 0 0.00014193 1 53552 82.417 77.103 1 0.55882 0.56955 0 14223000 9525200 4697400 39391 1525 14841 15244 61811 61811 VVPIASLTPYQSK 13 1 0 Unmodified _VVPIASLTPYQSK_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 701.9002 2 701.90066 1401.78677 NaN NaN NaN -0.48044 -0.00033722 NaN NaN NaN NaN 87.823 0.59428 87.823 87.593 88.187 0 0 0 0 0.0057954 1 54181 56.359 43.783 1 NaN NaN 0 8838500 8838500 0 39392 1525 14841 15244 61812 61812 VVPIASLTPYQSK 13 1 0 Unmodified _VVPIASLTPYQSK_ 0 0 0 P27694 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 701.9012 2 701.90066 1401.78677 73458.49 0.46178 0.00032413 0.15277 0.00010723 0.61456 0.00043136 701.900575661456 705.90787477228 101.5 0.68752 101.5 101.17 101.86 0 161 46 7 0 0 0 0.001511 1 56691 57.532 53.645 1 0.33939 0.27289 0 4242800 3151600 1091200 39393 1525 14841 15244 61813 61813 VVPINTPTAAVDQTLFPGK 19 1 0 Unmodified _VVPINTPTAAVDQTLFPGK_ 0 0 0 A0A087X295;Q9NNW5;E9PDU5;B4E256;B4DK45;Q8NDH0 A0A087X295 A0A087X295 WDR6;DKFZp434F1720 WD repeat-containing protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 988.5485 2 984.543665 1967.07278 59036.54 0.43317 0.00042647 -1.1504 -0.0011326 -0.71721 -0.00070612 985.546474406336 988.550156374726 111.46 0.55724 111.46 111.22 111.77 -7.6294E-06 125 36 7 0 0 0 4.1372E-05 1 71989 49.929 42.018 1 0.49018 0.48946 0 15082000 10524000 4558300 39394 451 14842 15245 61814 61814 VVPINTPTAAVDQTLFPGK 19 1 0 Unmodified _VVPINTPTAAVDQTLFPGK_ 0 0 0 A0A087X295;Q9NNW5;E9PDU5;B4E256;B4DK45;Q8NDH0 A0A087X295 A0A087X295 WDR6;DKFZp434F1720 WD repeat-containing protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 984.5402 2 984.543665 1967.07278 62073.55 0.50645 0.00049862 -0.8891 -0.00087536 -0.38266 -0.00037674 985.045082853969 988.550201252679 123.23 0.36301 123.23 123.04 123.41 0 71 15 8 0 0 0 0.0056346 1 73610 31.215 31.215 1 1.0237 0.84989 0 2283500 1030100 1253400 39395 451 14842 15245 61815 61815 VVPPLDEDGR 10 0 1 Unmodified _VVPPLDEDGR_ 0 0 0 A0A024RB10;A0A024RB77;G3V5T9;P24941;E7ESI2;B4DDL9 A0A024RB10 A0A024RB10 CDK2 Cyclin-dependent kinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.7908 2 548.785296 1095.55604 83136.86 0.54018 0.00029644 0.10893 5.9779E-05 0.64911 0.00035622 548.785707261231 553.789654230727 46.906 0.68908 46.906 46.537 47.226 0 202 60 5 0 0 0 0.0032667 1 25944 65.305 24.954 1 1.5818 1.7331 0 31323000 13264000 18059000 39396 318 14843 15246 61816 61816 VVPTLSTTDMK 11 1 0 Oxidation (M) _VVPTLSTTDM(ox)K_ VVPTLSTTDM(1)K VVPTLSTTDM(45.16)K 0 1 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.3162 2 604.315571 1206.61659 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.348 1 44.348 43.848 44.848 0 0 0 0 0.017646 1 23804 45.161 21.006 1 39397 135 14844 15247 61817 61817 116 VVQGLFDNFLR 11 0 1 Unmodified _VVQGLFDNFLR_ 0 0 0 E7EXA6;Q96S08;A0A0D9SF58;Q8WVB6 E7EXA6 E7EXA6 CHTF18;RUVBL Chromosome transmission fidelity protein 18 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.363 2 654.358962 1306.70337 NaN NaN NaN -0.79907 -0.00052288 NaN NaN NaN NaN 116.01 0.3874 116.01 115.79 116.18 0 0 0 0 0.041371 1 74024 46.819 31.157 1 NaN NaN 0 2699700 0 2699700 39398 524 14845 15248 61818 61818 VVQLHEYSEELEK 13 1 0 Unmodified _VVQLHEYSEELEK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709;Q68EN4;H0Y7K8;Q5H934;Q7Z4C6 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.3012 3 534.938511 1601.7937 84535.76 0.59427 0.0003179 0.24786 0.00013259 0.84213 0.00045049 534.938450280528 537.944511295698 55.787 0.48843 55.787 55.537 56.025 0 108 34 5 0 0 0 0.028848 1 31295 22.991 22.991 1 0.88872 0.93857 0 16313000 5782200 10531000 39399 1739 14846 15249 61819 61819 VVQLHEYSEELEK 13 1 0 Unmodified _VVQLHEYSEELEK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709;Q68EN4;H0Y7K8;Q5H934;Q7Z4C6 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 805.9128 2 801.904128 1601.7937 67815.29 0.75564 0.00060595 0.71476 0.00057317 1.4704 0.0011791 802.406000481547 805.912122860429 54.411 0.2083 54.411 54.292 54.5 0 46 15 4 0 0 0 0.00014095 1 31052 82.171 63.426 1 1.1793 1.1816 0 15780000 7470900 8309100 39400 1739 14846 15249 61820 61820 VVQMLGSLGGQINK 14 1 0 Oxidation (M) _VVQM(ox)LGSLGGQINK_ VVQM(1)LGSLGGQINK VVQM(101.93)LGSLGGQINK 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.4088 2 730.400501 1458.78645 72015.11 0.58751 0.00042912 -0.35678 -0.00026059 0.23073 0.00016852 730.399686602712 734.909358096174 66.74 0.47543 66.74 66.518 66.993 0 122 35 5 0 0 0 1.7644E-06 1 38572 101.93 101.93 1 1.2809 1.3381 0 12159000 4877900 7281600 39401 1665 14847 15250 61821 61821 1466 VVQMLGSLGGQINK 14 1 0 Oxidation (M) _VVQM(ox)LGSLGGQINK_ VVQM(1)LGSLGGQINK VVQM(63.41)LGSLGGQINK 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.9032 2 730.400501 1458.78645 NaN NaN NaN -0.36348 -0.00026549 NaN NaN NaN NaN 66.207 0.48584 66.207 65.954 66.44 0 0 0 0 0.00096043 1 38236 63.408 48.947 1 NaN NaN 0 5675500 5675500 0 39402 1665 14847 15250 61822 61822 1466 VVQMLGSLGGQINK 14 1 0 Oxidation (M) _VVQM(ox)LGSLGGQINK_ VVQM(1)LGSLGGQINK VVQM(62.47)LGSLGGQINK 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 734.4084 2 730.400501 1458.78645 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.037 1 66.037 65.537 66.537 0 0 0 0 0.0011489 1 38072 62.466 45.834 1 39403 1665 14847 15250 61823 61823 1466 VVQMLGSLGGQINK 14 1 0 Oxidation (M) _VVQM(ox)LGSLGGQINK_ VVQM(1)LGSLGGQINK VVQM(103.08)LGSLGGQINK 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.3997 2 730.400501 1458.78645 71717.69 0.39919 0.00029157 -0.09848 -7.193E-05 0.30071 0.00021964 730.400153892515 734.408230690557 65.114 0.464 65.114 64.872 65.336 0 113 37 4 0 0 0 1.5752E-06 1 38414 103.08 103.08 1 1.199 1.1969 0 14629000 5411900 9216700 39404 1665 14847 15250 61824 61824 1466 VVQMLGSLGGQINK 14 1 0 Oxidation (M) _VVQM(ox)LGSLGGQINK_ VVQM(1)LGSLGGQINK VVQM(104.22)LGSLGGQINK 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.4081 2 730.400501 1458.78645 71328.28 0.51715 0.00037773 -0.28244 -0.00020629 0.23471 0.00017143 730.40004869147 734.407650418797 65.648 0.45782 65.648 65.412 65.87 7.6294E-06 142 38 6 0 0 0 1.3887E-06 1 38733 104.22 104.22 1 1.2309 1.3055 0 20413000 9742000 10671000 39405 1665 14847 15250 61825 61825 1466 VVQMLGSLGGQINK 14 1 0 Oxidation (M) _VVQM(ox)LGSLGGQINK_ VVQM(1)LGSLGGQINK VVQM(90.69)LGSLGGQINK 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 730.4008 2 730.400501 1458.78645 NaN NaN NaN -0.34011 -0.00024842 NaN NaN NaN NaN 75.984 0.42802 75.984 75.794 76.222 7.6294E-06 0 0 0 2.0103E-05 1 40493 90.685 71.905 1 NaN NaN 0 2054900 2054900 0 39406 1665 14847 15250 61826 61826 1466 VVQMLGSLGGQINK 14 1 0 Oxidation (M) _VVQM(ox)LGSLGGQINK_ VVQM(1)LGSLGGQINK VVQM(71.03)LGSLGGQINK 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.4004 2 730.400501 1458.78645 NaN NaN NaN -0.41719 -0.00030471 NaN NaN NaN NaN 76.339 0.41562 76.339 76.146 76.562 0 0 0 0 0.0004497 1 39886 71.03 64.142 1 NaN NaN 0 1813500 1813500 0 39407 1665 14847 15250 61827 61827 1466 VVQNDAYTAPALPSSIR 17 0 1 Unmodified _VVQNDAYTAPALPSSIR_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DMM2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310 Polymerase delta-interacting protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.4781 2 901.475783 1800.93701 65743.23 0.87955 0.0007929 -0.36042 -0.00032491 0.51913 0.00046799 901.475362462551 906.479845448853 84.475 0.32224 84.475 84.282 84.604 0 82 25 6 0 0 0 0.00017208 2 50589 52.576 52.576 1 0.78407 0.81968 0 13121000 7939600 5181000 39408 1063 14848 15251 61828;61829 61829 VVQNDAYTAPALPSSIR 17 0 1 Unmodified _VVQNDAYTAPALPSSIR_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DMM2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310 Polymerase delta-interacting protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 906.4795 2 901.475783 1800.93701 NaN NaN NaN -0.42325 -0.00038155 NaN NaN NaN NaN 83.594 0.386 83.594 83.437 83.823 7.6294E-06 0 0 0 0.015756 1 51167 41.092 29.879 1 NaN NaN 0 3677500 0 3677500 39409 1063 14848 15251 61830 61830 VVQNDAYTAPALPSSIR 17 0 1 Unmodified _VVQNDAYTAPALPSSIR_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DMM2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 906.4802 2 901.475783 1800.93701 63975.96 0.69552 0.00062699 -0.1057 -9.529E-05 0.58982 0.0005317 901.977254545073 906.479743002338 97.04 0.6306 97.04 96.756 97.387 7.6294E-06 186 31 8 0 0 0 0.019405 2 54586 25.718 25.718 1 0.90068 0.76035 0 4790400 2706900 2083500 39410 1063 14848 15251 61831;61832 61831 VVQNDAYTAPALPSSIR 17 0 1 Unmodified _VVQNDAYTAPALPSSIR_ 0 0 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;Q8WUT1;F8WCX5;Q659C6;B4DMM2 Q96DI9 Q96DI9 POLDIP3;DKFZp434G0310 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 906.4805 2 901.475783 1800.93701 64731.42 0.093894 8.4643E-05 0.37563 0.00033862 0.46952 0.00042326 901.47532794595 906.480206103906 96.927 0.60912 96.927 96.621 97.23 0 161 28 11 0 0 0 0.00033202 3 53717 48.625 48.625 1 0.92018 0.76343 0 5222400 2781200 2441200 39411 1063 14848 15251 61833;61834;61835 61835 VVQVSAGDSHTAALTDDGR 19 0 1 Unmodified _VVQVSAGDSHTAALTDDGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 636.9813 3 633.644937 1897.91298 75519.81 0.44534 0.00028219 0.38726 0.00024538 0.8326 0.00052757 633.979449454198 636.981270695908 43.229 0.63597 43.229 42.886 43.522 0 344 51 11 0 0 0 1.1003E-64 3 23006 158.65 158.65 1 0.75497 0.85755 0 110400000 60641000 49763000 39412 550 14849 15252 61836;61837;61838 61837 VVQVSAGDSHTAALTDDGR 19 0 1 Unmodified _VVQVSAGDSHTAALTDDGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 954.9699 2 949.963768 1897.91298 62927.24 0.42844 0.000407 0.88032 0.00083627 1.3088 0.0012433 950.465762999868 955.471041662645 43.241 0.54923 43.241 42.973 43.522 0 164 44 7 0 0 0 5.6257E-30 2 23008 138.05 138.05 1 1.4003 1.4506 0 37523000 15518000 22005000 39413 550 14849 15252 61839;61840 61839 VVQVSAGDSHTAALTDDGR 19 0 1 Unmodified _VVQVSAGDSHTAALTDDGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.981 3 633.644937 1897.91298 75283.99 0.77839 0.00049322 -0.092283 -5.8475E-05 0.6861 0.00043475 633.979088652055 636.98102607107 42.301 0.57004 42.301 42.09 42.66 0 332 48 11 0 0 0 2.434E-51 2 22721 142.3 142.3 1 0.72513 0.82973 0 162050000 93998000 68051000 39414 550 14849 15252 61841;61842 61841 VVQVSAGDSHTAALTDDGR 19 0 1 Unmodified _VVQVSAGDSHTAALTDDGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 950.4645 2 949.963768 1897.91298 63283.39 0.74524 0.00070796 0.087539 8.3159E-05 0.83278 0.00079111 950.46532453727 955.470345712594 42.278 0.44053 42.278 42.156 42.597 0 141 36 7 0 0 0 6.9961E-18 3 22735 124.78 124.78 1 0.90406 1.0194 0 46809000 25015000 21794000 39415 550 14849 15252 61843;61844;61845 61843 VVQVSAGDSHTAALTDDGR 19 0 1 Unmodified _VVQVSAGDSHTAALTDDGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 633.9799 3 633.644937 1897.91298 75229.55 0.39944 0.0002531 0.095247 6.0353E-05 0.49468 0.00031345 633.979252180359 636.981103775206 50.421 0.95021 50.421 50.145 51.095 0 462 69 10 0 0 0 7.8723E-13 2 24676 91.475 91.475 1 0.93533 0.80115 0 40762000 21593000 19169000 39416 550 14849 15252 61846;61847 61847 VVQVSAGDSHTAALTDDGR 19 0 1 Unmodified _VVQVSAGDSHTAALTDDGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 949.9632 2 949.963768 1897.91298 61868.64 0.34453 0.00032729 -0.13102 -0.00012446 0.21351 0.00020283 950.464949370362 954.967753606902 50.412 0.51098 50.412 50.191 50.702 0 242 40 8 0 0 0 2.8879E-05 2 24721 56.872 56.872 1 0.83262 0.7167 0 7442700 4073000 3369700 39417 550 14849 15252 61848;61849 61849 VVQVSAGDSHTAALTDDGR 19 0 1 Unmodified _VVQVSAGDSHTAALTDDGR_ 0 0 0 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;C9JW69;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 Q5T081 Q5T081 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.6451 3 633.644937 1897.91298 76229.08 0.33946 0.0002151 0.065171 4.1296E-05 0.40463 0.00025639 633.979259554013 636.98109112406 50.927 0.99931 50.927 50.605 51.604 3.8147E-06 443 65 13 0 0 0 4.6272E-17 3 24530 97.32 97.32 1 0.88765 0.77429 0 31413000 17017000 14396000 39418 550 14849 15252 61850;61851;61852 61852 VVQVYR 6 0 1 Unmodified _VVQVYR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;J3KS10;H7C1F9;Q2PPJ7;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RALGAPA2;RPL26L1 60S ribosomal protein L26;Ral GTPase-activating protein subunit alpha-2;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 382.2267 2 382.226688 762.438824 97001.34 -0.033136 -1.2666E-05 -0.04416 -1.6879E-05 -0.077297 -2.9545E-05 382.226658408719 387.230705587583 26.7 1.1156 26.7 26.242 27.357 0 266 65 8 0 0 0 0.037909 1 12008 124.34 64.453 1 0.77355 0.91779 0 685900000 372590000 313310000 39419 1629;1214 14850 15253 61853 61853 VVQVYR 6 0 1 Unmodified _VVQVYR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;J3KS10;H7C1F9;Q2PPJ7;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RALGAPA2;RPL26L1 60S ribosomal protein L26;Ral GTPase-activating protein subunit alpha-2;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 382.2271 2 382.226688 762.438824 96741.6 -0.018543 -7.0876E-06 0.071011 2.7142E-05 0.052468 2.0055E-05 382.226676254227 387.230750854083 26.328 0.75697 26.328 26.105 26.862 -1.9073E-06 205 39 8 0 0 0 0.012133 1 11724 135.81 69.368 1 0.77013 0.89907 0 535380000 293080000 242300000 39420 1629;1214 14850 15253 61854 61854 VVQVYR 6 0 1 Unmodified _VVQVYR_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;A0A024RBF6;J3KS10;H7C1F9;Q2PPJ7;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;hCG_26523;RALGAPA2;RPL26L1 60S ribosomal protein L26;Ral GTPase-activating protein subunit alpha-2;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 382.2265 2 382.226688 762.438824 95518.55 0.018812 7.1904E-06 0.1502 5.741E-05 0.16901 6.4601E-05 382.226700667134 387.230763584557 29.585 0.83317 29.585 29.316 30.15 0 325 59 8 0 0 0 0.060248 1 11981 68.64 28.665 1 0.52224 0.44871 0 43734000 28476000 15258000 39421 1629;1214 14850 15253 61855 61855 VVSEDFLQDVSASTK 15 1 0 Unmodified _VVSEDFLQDVSASTK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 812.9078 2 812.906867 1623.79918 NaN NaN NaN 0.55096 0.00044788 NaN NaN NaN NaN 108.16 1.3272 108.16 107.82 109.15 0 0 0 0 6.5342E-06 1 62093 91.914 83.185 1 NaN NaN 0 82223000 82223000 0 39422 139 14851 15254 61856 61856 VVSEDFLQDVSASTK 15 1 0 Unmodified _VVSEDFLQDVSASTK_ 0 0 0 A0A024R3T8;P09874;B4E0E1;B2R5W3 A0A024R3T8 A0A024R3T8 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 812.9078 2 812.906867 1623.79918 NaN NaN NaN 0.33605 0.00027318 NaN NaN NaN NaN 108.13 1.5219 108.13 107.74 109.26 0 0 0 0 1.9914E-10 1 61242 110.64 102.33 1 NaN NaN 0 76214000 76214000 0 39423 139 14851 15254 61857 61857 VVSHSGSAGLSQVR 14 0 1 Unmodified _VVSHSGSAGLSQVR_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.916 3 461.916152 1382.72663 89168.38 0.22028 0.00010175 -0.19554 -9.0325E-05 0.024732 1.1424E-05 461.91602829893 465.252006712667 22.184 0.42202 22.184 21.945 22.367 0 61 19 6 0 0 0 3.8655E-05 1 8242 80.905 74.324 1 0.74858 0.75156 0 19100000 12652000 6447400 39424 135 14852 15255 61858 61858 VVSHSGSAGLSQVR 14 0 1 Unmodified _VVSHSGSAGLSQVR_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 697.3749 2 692.370589 1382.72663 74032.15 0.61743 0.00042749 -0.3424 -0.00023707 0.27503 0.00019042 692.370169567443 697.374568344002 22.187 0.281 22.187 22.107 22.388 0 35 13 5 0 0 0 0.00065986 2 8244 68.355 52.726 1 0.83154 0.8285 0 16517000 8611100 7905900 39425 135 14852 15255 61859;61860 61859 VVSHSGSAGLSQVR 14 0 1 Unmodified _VVSHSGSAGLSQVR_ 0 0 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 697.3749 2 692.370589 1382.72663 72946.65 0.49578 0.00034327 -0.12422 -8.6004E-05 0.37157 0.00025726 692.370381182672 697.374653721337 24.709 0.55811 24.709 24.309 24.867 0 69 26 5 0 0 0 0.026365 1 8299 43.604 43.604 1 1.4504 1.256 0 996380 294010 702370 39426 135 14852 15255 61861 61861 VVSLEAELQDISSQESK 17 1 0 Unmodified _VVSLEAELQDISSQESK_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614;B4DYM1;B4DZ32 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.4697 2 931.473103 1860.93165 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.02 1 109.02 108.52 109.52 0 0 0 0 0.00039103 1 68180 69.352 49.509 1 39427 12 14853 15256 61862 61862 VVSLEAELQDISSQESK 17 1 0 Unmodified _VVSLEAELQDISSQESK_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614;B4DYM1;B4DZ32 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 935.4783 2 931.473103 1860.93165 NaN NaN NaN 0.93996 0.00087554 NaN NaN NaN NaN 108.55 0.43581 108.55 108.2 108.63 0 0 0 0 0.001332 1 69491 59.116 40.98 1 NaN NaN 0 4240700 0 4240700 39428 12 14853 15256 61863 61863 VVSLSEYR 8 0 1 Unmodified _VVSLSEYR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.7624 2 476.758549 951.502546 87732.77 0.14558 6.9406E-05 0.10953 5.222E-05 0.25511 0.00012163 476.758475417767 481.762589326086 47.724 0.40465 47.724 47.386 47.791 0 202 34 8 0 0 0 0.0029606 2 25784 98.299 49.796 1 0.80911 0.95719 0 307480000 171990000 135490000 39429 785 14854 15257 61864;61865 61864 VVSLSEYR 8 0 1 Unmodified _VVSLSEYR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 477.2939 2 476.758549 951.502546 87732.78 0.21143 0.0001008 0.27459 0.00013092 0.48602 0.00023171 476.758562759149 481.76270475401 47.862 0.77588 47.862 47.782 48.558 0 301 66 8 0 0 0 0.05233 1 26156 108.09 65.613 1 0.69526 0.82269 0 327250000 176660000 150590000 39430 785 14854 15257 61866 61866 VVSLSEYR 8 0 1 Unmodified _VVSLSEYR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 476.7584 2 476.758549 951.502546 88055.1 0.33344 0.00015897 0.23071 0.00010999 0.56414 0.00026896 476.758581874714 481.762648827693 46.605 0.97746 46.605 46.344 47.321 0 415 81 8 0 0 0 0.0022722 2 25732 101.28 59.982 1 0.76194 0.88903 0 512330000 275990000 236330000 39431 785 14854 15257 61867;61868 61868 VVSLSEYR 8 0 1 Unmodified _VVSLSEYR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.7627 2 476.758549 951.502546 86477.3 0.24312 0.00011591 -0.17453 -8.3208E-05 0.068586 3.2699E-05 476.758440512835 481.76248089552 55.208 1.6395 55.208 54.806 56.445 3.8147E-06 474 105 9 0 0 0 0.011179 2 27492 70.525 36.878 1 0.94118 0.81001 0 53484000 28047000 25437000 39432 785 14854 15257 61869;61870 61869 VVSLSEYR 8 0 1 Unmodified _VVSLSEYR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 481.7629 2 476.758549 951.502546 87296.34 0.24193 0.00011534 -0.028023 -1.336E-05 0.21391 0.00010198 476.758506399683 481.76252766849 55.587 1.6804 55.587 55.18 56.86 0 448 109 9 0 0 0 0.01739 2 27100 60.478 24.292 1 0.93277 0.81377 0 49431000 25306000 24124000 39433 785 14854 15257 61871;61872 61871 VVSQYHELVVQAR 13 0 1 Unmodified _VVSQYHELVVQAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 509.9476 3 509.947452 1526.82053 85328.13 0.13658 6.9647E-05 0.34252 0.00017467 0.47909 0.00024431 509.947557429343 513.283681740831 50.265 0.58424 50.265 49.904 50.488 0 315 55 8 0 0 0 0.0020921 1 27654 45.79 45.79 1 1.0281 1.1409 0 68829000 29674000 39155000 39434 1774;1029;1128 14855 15258 61873 61873 VVSQYHELVVQAR 13 0 1 Unmodified _VVSQYHELVVQAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 769.423 2 764.41754 1526.82053 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.089 1 50.089 49.589 50.589 3.8147E-06 0 0 0 1.2814E-06 1 27631 103.34 64.037 1 39435 1774;1029;1128 14855 15258 61874 61874 VVSQYHELVVQAR 13 0 1 Unmodified _VVSQYHELVVQAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 764.4185 2 764.41754 1526.82053 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.127 1 50.127 49.627 50.627 0 0 0 0 2.4275E-06 1 27652 99.283 82.369 1 39436 1774;1029;1128 14855 15258 61875 61875 VVSQYHELVVQAR 13 0 1 Unmodified _VVSQYHELVVQAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 764.4185 2 764.41754 1526.82053 69952.13 0.89331 0.00068287 0.040865 3.1238E-05 0.93418 0.0007141 764.41726918872 769.421762466787 48.547 0.46087 48.547 48.273 48.734 0 122 32 6 0 0 0 6.358E-19 3 27106 172.13 143.95 1 1.0402 1.1506 0 42099000 20031000 22068000 39437 1774;1029;1128 14855 15258 61876;61877;61878 61877 VVSQYHELVVQAR 13 0 1 Unmodified _VVSQYHELVVQAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 509.9489 3 509.947452 1526.82053 83799.32 0.66233 0.00033776 -0.20364 -0.00010385 0.45869 0.00023391 509.947456845687 513.283187843414 48.545 0.64273 48.545 48.215 48.857 0 270 47 9 0 0 0 2.4807E-09 2 27128 117.07 98.976 1 1.1207 1.2746 0 118990000 55058000 63936000 39438 1774;1029;1128 14855 15258 61879;61880 61879 VVSQYHELVVQAR 13 0 1 Unmodified _VVSQYHELVVQAR_ 0 0 0 B4DS66;H7C463;C9J406;Q16891;B9A067;B4DQY2;B4DKR1 B4DS66;C9J406;Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 513.2845 3 509.947452 1526.82053 84390.25 0.39147 0.00019963 0.85866 0.00043787 1.2501 0.0006375 509.947571507469 513.284216216463 58.049 0.54195 58.049 57.842 58.384 0 173 39 6 0 0 0 0.006287 1 28781 30.176 18.736 1 1.6899 1.4662 0 4312500 1481900 2830600 39439 1774;1029;1128 14855 15258 61881 61881 VVSSVLQFGNISFK 14 1 0 Unmodified _VVSSVLQFGNISFK_ 0 0 0 P35580 P35580 P35580 MYH10 Myosin-10 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 766.934 2 762.924666 1523.83478 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.16 1 115.16 114.66 115.66 7.6294E-06 0 0 0 0.048739 1 75084 40.589 15.203 1 39440 1544 14856 15259 61882 61882 VVSTHEQIVR 10 0 1 Unmodified _VVSTHEQIVR_ 0 0 0 CON__Q61782 CON__Q61782 CON__Q61782 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 389.8879 3 389.887533 1166.64077 NaN NaN NaN 0.65896 0.00025692 NaN NaN NaN NaN 24.48 0.37481 24.48 24.192 24.566 0 0 0 0 0.014565 1 10178 39.918 0.7703 1 NaN NaN 0 9016500 9016500 0 + 39441 1176 14857 15260 61883 61883 VVSTHEQIVR 10 0 1 Unmodified _VVSTHEQIVR_ 0 0 0 CON__Q61782 CON__Q61782 CON__Q61782 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 389.8877 3 389.887533 1166.64077 NaN NaN NaN -0.03437 -1.3401E-05 NaN NaN NaN NaN 24.004 0.2538 24.004 23.873 24.127 0 0 0 0 0.00067619 1 9798 81.338 1.3638 1 NaN NaN 0 14248000 14248000 0 + 39442 1176 14857 15260 61884 61884 VVSVQLGDGTR 11 0 1 Unmodified _VVSVQLGDGTR_ 0 0 0 Q8N1G0;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.8118 2 565.811845 1129.60914 NaN NaN NaN -1.8646 -0.001055 NaN NaN NaN NaN 50.16 0.60688 50.16 49.871 50.478 -3.8147E-06 0 0 0 1.656E-05 2 27570 103.55 62.517 1 NaN NaN 0 27466000 27466000 0 39443 1905 14858 15261 61885;61886 61885 VVSVQLGDGTR 11 0 1 Unmodified _VVSVQLGDGTR_ 0 0 0 Q8N1G0;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.8123 2 565.811845 1129.60914 79999.62 0.52413 0.00029656 0.63781 0.00036088 1.1619 0.00065744 565.812157152892 570.816333605129 48.828 0.46256 48.828 48.642 49.104 0 162 37 7 0 0 0 5.7131E-08 1 27410 116.3 75.275 1 0.81071 0.92393 0 49651000 26616000 23035000 39444 1905 14858 15261 61887 61887 VVSVQLGDGTR 11 0 1 Unmodified _VVSVQLGDGTR_ 0 0 0 Q8N1G0;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.8162 2 565.811845 1129.60914 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.878 1 57.878 57.378 58.378 -3.8147E-06 0 0 0 0.011354 1 28737 57.532 24.691 1 39445 1905 14858 15261 61888 61888 VVTATLWGEDADK 13 1 0 Unmodified _VVTATLWGEDADK_ 0 0 0 P27694;I3L4R8 P27694 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.854 2 702.853906 1403.69326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.949 1 77.949 77.449 78.449 0 0 0 0 0.0027984 1 46094 66.262 54.415 1 39446 1525 14859 15262 61889 61889 VVTDLISLIR 10 0 1 Unmodified _VVTDLISLIR_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.853 2 564.852981 1127.69141 81604.13 0.78212 0.00044178 0.051518 2.91E-05 0.83363 0.00047088 564.852982036722 569.857034491387 118.85 0.65646 118.85 118.42 119.08 0 172 38 6 0 0 0 7.6586E-12 3 76135 141.48 98.882 1 0.69944 0.72729 0 22112000 12882000 9230200 39447 1552 14860 15263 61890;61891;61892 61891 VVTDLISLIR 10 0 1 Unmodified _VVTDLISLIR_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.8532 2 564.852981 1127.69141 81730.09 0.71286 0.00040266 -0.046035 -2.6003E-05 0.66683 0.00037666 564.852911746285 569.856927693544 118.2 0.63547 118.2 117.93 118.57 0 196 39 7 0 0 0 2.253E-09 2 77585 128.36 85.763 1 0.75505 0.82632 0 33436000 18897000 14539000 39448 1552 14860 15263 61893;61894 61894 VVTDLISLIR 10 0 1 Unmodified _VVTDLISLIR_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.8577 2 564.852981 1127.69141 81443.41 0.64225 0.00036278 0.035858 2.0254E-05 0.67811 0.00038303 564.852929006449 569.857131641258 130.93 0.61325 130.93 130.62 131.23 0 119 26 7 0 0 0 0.0032667 2 79294 65.305 41.877 1 0.67774 0.57487 0 5117300 2895700 2221500 39449 1552 14860 15263 61895;61896 61896 VVTDLISLIR 10 0 1 Unmodified _VVTDLISLIR_ 0 0 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.8535 2 564.852981 1127.69141 81372.46 0.90678 0.0005122 -0.23579 -0.00013319 0.67099 0.00037901 564.852829907995 569.856947006288 130.75 0.65054 130.75 130.4 131.05 0 108 27 6 0 0 0 0.011972 1 78210 51.268 37.061 1 0.59024 0.49132 0 7170700 4536600 2634200 39450 1552 14860 15263 61897 61897 VVTDTDETELAR 12 0 1 Unmodified _VVTDTDETELAR_ 0 0 0 Q53XC0;P05198 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 674.833 2 674.833171 1347.65179 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.175 1 42.175 41.675 42.675 0 0 0 0 1.4382E-06 1 22359 97.456 79.637 1 39451 1445 14861 15264 61898 61898 VVTDTDETELAR 12 0 1 Unmodified _VVTDTDETELAR_ 0 0 0 Q53XC0;P05198 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.8338 2 674.833171 1347.65179 NaN NaN NaN 0.061955 4.1809E-05 NaN NaN NaN NaN 41.506 0.40636 41.506 41.237 41.643 0 0 0 0 3.6271E-05 1 22218 97.597 82.93 1 NaN NaN 0 10858000 10858000 0 39452 1445 14861 15264 61899 61899 VVTGVANALAHR 12 0 1 Unmodified _VVTGVANALAHR_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 403.2354 3 403.235045 1206.6833 NaN NaN NaN 0.22394 9.0301E-05 NaN NaN NaN NaN 45.177 0.6714 45.177 44.799 45.471 0 0 0 0 0.00042946 1 24199 64.906 55.251 1 NaN NaN 0 81870000 81870000 0 + 39453 1172 14862 15265 61900 61900 VVTGVANALAHR 12 0 1 Unmodified _VVTGVANALAHR_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.3508 2 604.348929 1206.6833 NaN NaN NaN -0.20713 -0.00012518 NaN NaN NaN NaN 45.258 0.48212 45.258 44.977 45.459 -3.8147E-06 0 0 0 3.8903E-08 1 24435 107.15 86.252 1 NaN NaN 0 19772000 19772000 0 + 39454 1172 14862 15265 61901 61901 VVTGVANALAHR 12 0 1 Unmodified _VVTGVANALAHR_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 403.235 3 403.235045 1206.6833 NaN NaN NaN -0.3204 -0.0001292 NaN NaN NaN NaN 43.682 1.1251 43.682 43.33 44.455 3.8147E-06 0 0 0 0.0004257 1 23664 79.07 69.415 1 NaN NaN 0 121160000 121160000 0 + 39455 1172 14862 15265 61902 61902 VVTGVANALAHR 12 0 1 Unmodified _VVTGVANALAHR_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.349 2 604.348929 1206.6833 NaN NaN NaN -0.32134 -0.0001942 NaN NaN NaN NaN 43.683 0.32287 43.683 43.505 43.828 0 0 0 0 3.0397E-28 1 23782 146.88 117.07 1 NaN NaN 0 25183000 25183000 0 + 39456 1172 14862 15265 61903 61903 VVTGVANALAHR 12 0 1 Unmodified _VVTGVANALAHR_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 403.2348 3 403.235045 1206.6833 NaN NaN NaN 0.085719 3.4565E-05 NaN NaN NaN NaN 51.659 0.95771 51.659 51.479 52.437 3.8147E-06 0 0 0 0.024102 1 25525 28.903 19.581 1 NaN NaN 0 6448800 6448800 0 + 39457 1172 14862 15265 61904 61904 VVTGVANALAHR 12 0 1 Unmodified _VVTGVANALAHR_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.3492 2 604.348929 1206.6833 NaN NaN NaN -0.71626 -0.00043287 NaN NaN NaN NaN 51.91 0.34324 51.91 51.763 52.106 0 0 0 0 0.0069371 1 25028 59.426 35.271 1 NaN NaN 0 2967000 2967000 0 + 39458 1172 14862 15265 61905 61905 VVTLQGQIIEQSGTMTGGGSK 21 1 0 Oxidation (M) _VVTLQGQIIEQSGTM(ox)TGGGSK_ VVTLQGQIIEQSGTM(1)TGGGSK VVTLQGQIIEQSGTM(127.18)TGGGSK 0 1 0 Q9NTJ3;E9PD53;B3KXX5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1058.0458 2 1054.03862 2106.06268 59358.75 0.37369 0.00039389 -0.03841 -4.0485E-05 0.33528 0.0003534 1054.0386629818 1058.04576950886 73.053 0.8009 73.053 72.75 73.551 0 466 70 9 0 0 0 6.4261E-29 2 42678 127.18 127.18 1 1.0424 1.1753 0 129310000 69916000 59396000 39459 2070 14863 15266 61906;61907 61907 1908 VVTLQGQIIEQSGTMTGGGSK 21 1 0 Oxidation (M) _VVTLQGQIIEQSGTM(ox)TGGGSK_ VVTLQGQIIEQSGTM(1)TGGGSK VVTLQGQIIEQSGTM(174.59)TGGGSK 0 1 0 Q9NTJ3;E9PD53;B3KXX5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1058.5481 2 1054.03862 2106.06268 59738.26 0.33941 0.00035775 -0.19696 -0.00020761 0.14244 0.00015014 1054.54005334067 1058.54721064244 72.11 0.79383 72.11 71.726 72.52 0 508 71 10 0 0 0 1.2677E-59 2 43097 174.59 174.59 1 1.0221 1.1588 0 138290000 70281000 68010000 39460 2070 14863 15266 61908;61909 61908 1908 VVTLQGQIIEQSGTMTGGGSK 21 1 0 Oxidation (M) _VVTLQGQIIEQSGTM(ox)TGGGSK_ VVTLQGQIIEQSGTM(1)TGGGSK VVTLQGQIIEQSGTM(67.14)TGGGSK 0 1 0 Q9NTJ3;E9PD53;B3KXX5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1058.5469 2 1054.03862 2106.06268 59997.96 0.25037 0.0002639 0.71949 0.00075837 0.96986 0.0010223 1054.54114535548 1058.04662196567 98.251 0.47948 98.251 98.008 98.487 -7.6294E-06 144 27 8 0 0 0 5.202E-08 1 55344 67.136 67.136 1 2.1924 1.7416 0 6542300 1974700 4567600 39461 2070 14863 15266 61910 61910 1908 VVTLQGQIIEQSGTMTGGGSK 21 1 0 Oxidation (M) _VVTLQGQIIEQSGTM(ox)TGGGSK_ VVTLQGQIIEQSGTM(1)TGGGSK VVTLQGQIIEQSGTM(69.26)TGGGSK 0 1 0 Q9NTJ3;E9PD53;B3KXX5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1054.54 2 1054.03862 2106.06268 59018.04 0.35233 0.00037137 -0.29114 -0.00030687 0.061193 6.45E-05 1054.53996431583 1058.04558470091 83.915 0.79676 83.915 83.558 84.354 0 464 62 10 0 0 0 4.1587E-08 1 44887 69.261 69.261 1 1.2193 1.0109 0 35082000 16620000 18462000 39462 2070 14863 15266 61911 61911 1908 VVTLQGQIIEQSGTMTGGGSK 21 1 0 Unmodified _VVTLQGQIIEQSGTMTGGGSK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1046.0422 2 1046.04116 2090.06777 59239.79 0.30173 0.00031563 0.60766 0.00063564 0.90939 0.00095126 1046.5431279556 1050.04896736497 98.255 0.58517 98.255 97.996 98.581 7.6294E-06 222 34 10 0 0 0 2.413E-05 2 55314 46.89 46.89 1 2.2481 1.772 0 17675000 5107300 12568000 39463 2070 14863 15267 61912;61913 61913 VVTLQGQIIEQSGTMTGGGSK 21 1 0 Unmodified _VVTLQGQIIEQSGTMTGGGSK_ 0 0 0 Q9NTJ3;E9PD53;B3KXX5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1046.0405 2 1046.04116 2090.06777 59410.69 0.32637 0.0003414 0.038074 3.9826E-05 0.36445 0.00038123 1046.54267064645 1050.04838661043 98.149 0.65921 98.149 97.886 98.545 -7.6294E-06 257 40 11 0 0 0 9.3389E-07 2 54447 54.501 54.501 1 2.1684 1.7428 0 16940000 5511000 11429000 39464 2070 14863 15267 61914;61915 61915 VVTSEDQVQEGTK 13 1 0 Unmodified _VVTSEDQVQEGTK_ 0 0 0 B2RMQ4;Q8WWK9;C9J7Y4 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 714.3596 2 710.351728 1418.6889 71444.09 0.96237 0.00068362 0.42246 0.00030009 1.3848 0.00098372 710.352373936795 714.358554840045 22.777 0.36102 22.777 22.603 22.964 0 90 20 6 0 0 0 8.0856E-19 3 8724 143.61 139.85 1 0.79359 0.83968 0 15635000 9189000 6445700 39465 895 14864 15268 61916;61917;61918 61918 VVTSEDQVQEGTK 13 1 0 Unmodified _VVTSEDQVQEGTK_ 0 0 0 B2RMQ4;Q8WWK9;C9J7Y4 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 714.359 2 710.351728 1418.6889 73430.58 0.55397 0.00039351 0.42885 0.00030463 0.98281 0.00069814 710.35196767324 714.358754430182 22.552 0.38133 22.552 22.388 22.77 -1.9073E-06 74 15 8 0 0 0 1.8172E-23 2 8512 153.12 153.12 1 0.69047 0.73287 0 20477000 12774000 7703600 39466 895 14864 15268 61919;61920 61919 VVTSEDQVQEGTK 13 1 0 Unmodified _VVTSEDQVQEGTK_ 0 0 0 B2RMQ4;Q8WWK9;C9J7Y4 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 714.3595 2 710.351728 1418.6889 73109.52 0.53443 0.00037963 -0.042468 -3.0167E-05 0.49196 0.00034946 710.351680220846 714.358807312679 25.49 0.38865 25.49 25.304 25.692 0 76 15 8 0 0 0 0.00014459 2 9288 83.081 75.953 1 1.4459 1.1846 0 2536900 1041000 1495900 39467 895 14864 15268 61921;61922 61921 VVTSEDQVQEGTK 13 1 0 Unmodified _VVTSEDQVQEGTK_ 0 0 0 B2RMQ4;Q8WWK9;C9J7Y4 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.3517 2 710.351728 1418.6889 72400.93 0.62047 0.00044075 -0.10978 -7.7982E-05 0.51069 0.00036277 710.351476992382 714.358862233751 25.63 0.37472 25.63 25.445 25.82 0 56 14 5 0 0 0 0.00057491 2 8892 61.344 61.344 1 1.1862 0.94857 0 3066200 1454000 1612200 39468 895 14864 15268 61923;61924 61923 VVTTCADCNLR 11 0 1 Unmodified _VVTTCADCNLR_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.8067 2 654.805379 1307.59621 NaN NaN NaN -0.11504 -7.5332E-05 NaN NaN NaN NaN 31.616 0.37886 31.616 31.44 31.819 0 0 0 0 0.0029093 1 15542 70.056 65.273 1 NaN NaN 0 4315500 4315500 0 39469 508 14865 15269 61925 61925 VVTTCADCNLR 11 0 1 Unmodified _VVTTCADCNLR_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.8104 2 654.805379 1307.59621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.526 1 31.526 31.026 32.026 1.9073E-06 0 0 0 0.016584 1 15555 55.064 44.832 1 39470 508 14865 15269 61926 61926 VVTTCADCNLR 11 0 1 Unmodified _VVTTCADCNLR_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.807 2 654.805379 1307.59621 NaN NaN NaN 0.37728 0.00024704 NaN NaN NaN NaN 30.997 0.39294 30.997 30.764 31.157 0 0 0 0 0.017908 1 15150 53.756 48.973 1 NaN NaN 0 4701600 4701600 0 39471 508 14865 15269 61927 61927 VVTTCADCNLR 11 0 1 Unmodified _VVTTCADCNLR_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.8104 2 654.805379 1307.59621 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.043 1 31.043 30.543 31.543 0 0 0 0 0.038023 1 15298 45.368 34.538 1 39472 508 14865 15269 61928 61928 VVTTCADCNLR 11 0 1 Unmodified _VVTTCADCNLR_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 660.313 2 654.805379 1307.59621 74762.39 0.49866 0.00032652 0.35343 0.00023143 0.85209 0.00055795 654.805185870925 659.809378986565 36.498 0.8296 36.498 36.268 37.097 0 174 74 5 0 0 0 0.0053167 3 16386 56.432 48.506 1 1.5336 1.293 0 3037100 1207500 1829600 39473 508 14865 15269 61929;61930;61931 61931 VVTVVTTK 8 1 0 Unmodified _VVTVVTTK_ 0 0 0 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 A8K6X3 A8K6X3 DDX46 Probable ATP-dependent RNA helicase DDX46 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.7682 2 423.768386 845.522219 NaN NaN NaN -0.1498 -6.348E-05 NaN NaN NaN NaN 30.726 0.26422 30.726 30.581 30.845 0 0 0 0 0.025358 1 15074 62.107 47.332 1 NaN NaN 0 6934500 6934500 0 39474 511 14866 15270 61932 61932 VVVAENFDEIVNNENK 16 1 0 Unmodified _VVVAENFDEIVNNENK_ 0 0 0 B4DDM1;B3KQT9;B3KQT2;V9HVY3;P30101;B4DJ98 B4DDM1 B4DDM1 HEL-S-269;PDIA3 Protein disulfide-isomerase;Protein disulfide-isomerase A3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 916.9539 2 916.95488 1831.89521 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.44 1 92.44 91.94 92.94 0 0 0 0 0.0031391 1 56020 54.343 39.663 1 39475 930 14867 15271 61933 61933 VVVAENFDEIVNNENK 16 1 0 Unmodified _VVVAENFDEIVNNENK_ 0 0 0 B4DDM1;B3KQT9;B3KQT2;V9HVY3;P30101;B4DJ98 B4DDM1 B4DDM1 HEL-S-269;PDIA3 Protein disulfide-isomerase;Protein disulfide-isomerase A3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 920.9638 2 916.95488 1831.89521 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.649 1 91.649 91.149 92.149 0 0 0 0 7.4775E-08 1 56755 105.17 81.935 1 39476 930 14867 15271 61934 61934 VVVAENFDEIVNNENK 16 1 0 Unmodified _VVVAENFDEIVNNENK_ 0 0 0 B4DDM1;B3KQT9;B3KQT2;V9HVY3;P30101;B4DJ98 B4DDM1 B4DDM1 HEL-S-269;PDIA3 Protein disulfide-isomerase;Protein disulfide-isomerase A3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.956 2 916.95488 1831.89521 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.72 1 91.72 91.22 92.22 0 0 0 0 0.00037349 1 56798 79.492 61.224 1 39477 930 14867 15271 61935 61935 VVVAENFDEIVNNENK 16 1 0 Unmodified _VVVAENFDEIVNNENK_ 0 0 0 B4DDM1;B3KQT9;B3KQT2;V9HVY3;P30101;B4DJ98 B4DDM1 B4DDM1 HEL-S-269;PDIA3 Protein disulfide-isomerase;Protein disulfide-isomerase A3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 920.9616 2 916.95488 1831.89521 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.836 1 91.836 91.336 92.336 0 0 0 0 0.00074619 1 56878 57.836 41.583 1 39478 930 14867 15271 61936 61936 VVVAENFDEIVNNENK 16 1 0 Unmodified _VVVAENFDEIVNNENK_ 0 0 0 B4DDM1;B3KQT9;B3KQT2;V9HVY3;P30101;B4DJ98 B4DDM1 B4DDM1 HEL-S-269;PDIA3 Protein disulfide-isomerase;Protein disulfide-isomerase A3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 916.9543 2 916.95488 1831.89521 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.859 1 91.859 91.359 92.359 0 0 0 0 0.00096086 1 56893 66.267 50.013 1 39479 930 14867 15271 61937 61937 VVVDPVVTEQPSTSSAAK 18 1 0 Unmodified _VVVDPVVTEQPSTSSAAK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 907.4806 2 907.480731 1812.94691 63723.5 0.35378 0.00032105 -0.027057 -2.4554E-05 0.32672 0.00029649 907.480907687813 911.487986899643 67.19 0.86217 67.19 66.884 67.747 0 442 69 10 0 0 0 2.6504E-16 5 38659 114.56 108.84 1 0.74751 0.85901 0 202250000 117300000 84947000 39480 1942 14868 15272 61938;61939;61940;61941;61942 61939 VVVDPVVTEQPSTSSAAK 18 1 0 Unmodified _VVVDPVVTEQPSTSSAAK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 911.4879 2 907.480731 1812.94691 63267.04 0.3375 0.00030628 -0.301 -0.00027315 0.036505 3.3128E-05 907.480791189457 911.487693716268 66.029 1.0249 66.029 65.647 66.672 0 511 85 10 0 0 0 7.286E-12 4 39117 107.14 107.14 1 0.81178 0.93153 0 168510000 93491000 75020000 39481 1942 14868 15272 61943;61944;61945;61946 61945 VVVDPVVTEQPSTSSAAK 18 1 0 Unmodified _VVVDPVVTEQPSTSSAAK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 911.4881 2 907.480731 1812.94691 63389.54 0.30247 0.00027449 -0.01953 -1.7724E-05 0.28294 0.00025676 907.481092123948 911.487905723844 76.98 1.3228 76.98 76.6 77.923 0 620 88 11 0 0 0 1.0168E-07 5 40984 89.507 89.507 1 1.4734 1.2609 0 71807000 29721000 42086000 39482 1942 14868 15272 61947;61948;61949;61950;61951 61949 VVVDPVVTEQPSTSSAAK 18 1 0 Unmodified _VVVDPVVTEQPSTSSAAK_ 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 912.4862 2 907.480731 1812.94691 63555.03 0.35586 0.00032294 -0.056884 -5.1621E-05 0.29898 0.00027132 907.481058001991 911.487889430268 77.303 1.2938 77.303 76.788 78.082 0 596 84 10 0 0 0 2.8544E-05 4 40370 67.275 67.275 1 1.4836 1.2594 0 70378000 28376000 42002000 39483 1942 14868 15272 61952;61953;61954;61955 61954 VVVEPPEGEEK 11 1 0 Unmodified _VVVEPPEGEEK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.3115 2 606.311343 1210.60813 76921.6 0.83112 0.00050391 0.11627 7.0495E-05 0.94739 0.00057441 606.311346669087 610.318358657024 38.308 1.0279 38.308 37.814 38.842 0 448 86 7 0 0 0 0.00031294 2 19436 87.913 75.866 1 0.74031 0.84281 0 169780000 99048000 70732000 39484 515 14869 15273 61956;61957 61957 VVVEPPEGEEK 11 1 0 Unmodified _VVVEPPEGEEK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.3129 2 606.311343 1210.60813 NaN NaN NaN 0.36129 0.00021906 NaN NaN NaN NaN 37.336 0.43048 37.336 36.962 37.392 0 0 0 0 0.00080395 1 19190 87.913 61.529 1 NaN NaN 0 141880000 141880000 0 39485 515 14869 15273 61958 61958 VVVEPPEGEEK 11 1 0 Unmodified _VVVEPPEGEEK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.3181 2 606.311343 1210.60813 76954.04 0.39842 0.00024157 0.21359 0.0001295 0.61201 0.00037107 606.311410892446 610.318475721146 37.435 0.84409 37.435 37.004 37.848 -3.8147E-06 214 68 6 0 0 0 0.00045765 1 19265 101.11 101.11 1 0.71933 0.83122 0 196920000 112690000 84229000 39486 515 14869 15273 61959 61959 VVVEPPEGEEK 11 1 0 Unmodified _VVVEPPEGEEK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 606.3115 2 606.311343 1210.60813 76986.22 0.46618 0.00028265 0.15333 9.2964E-05 0.61951 0.00037561 606.311446810045 610.318357000236 43.654 1.4119 43.654 43.075 44.487 3.8147E-06 468 94 7 0 0 0 0.00034647 2 20681 85.676 73.629 1 1.9117 1.5066 0 17651000 5986300 11664000 39487 515 14869 15273 61960;61961 61961 VVVEPPEGEEK 11 1 0 Unmodified _VVVEPPEGEEK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 606.3118 2 606.311343 1210.60813 76683.9 0.42601 0.00025829 0.13284 8.0543E-05 0.55885 0.00033884 606.311491853872 610.318339776163 43.754 1.1819 43.754 43.263 44.445 0 451 76 7 0 0 0 0.00041914 3 20188 79.974 65.307 1 1.974 1.5863 0 16505000 5390900 11114000 39488 515 14869 15273 61962;61963;61964 61963 VVVEPVGPVGFKPETFR 17 1 1 Unmodified _VVVEPVGPVGFKPETFR_ 0 0 1 Q9BZE1;Q6TGK8;A6NHR2 Q9BZE1 Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.681 3 619.680483 1856.01962 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.07 1 96.07 95.57 96.57 0 0 0 0 0.030871 1 58500 31.42 24.529 1 39489 2020 14870 15274 61965 61965 VVVEPVGPVGFKPETFR 17 1 1 Unmodified _VVVEPVGPVGFKPETFR_ 0 0 1 Q9BZE1;Q6TGK8;A6NHR2 Q9BZE1 Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.689 3 619.680483 1856.01962 79726.77 0.48155 0.00029841 0.021643 1.3412E-05 0.50319 0.00031182 620.014888673667 625.688024684447 94.893 0.42838 94.893 94.648 95.076 0 106 36 5 0 0 0 0.041071 1 59010 19.553 15.456 1 1.1035 1.2257 0 10363000 5394200 4968300 39490 2020 14870 15274 61966 61966 VVVLGLLPR 9 0 1 Unmodified _VVVLGLLPR_ 0 0 0 M0R389;A0A024R0L6;Q15102 M0R389 M0R389 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.3321 2 483.328945 964.643337 NaN NaN NaN -0.010422 -5.0371E-06 NaN NaN NaN NaN 107.97 0.50874 107.97 107.71 108.22 0 0 0 0 0.035231 1 67191 51.787 35.493 1 NaN NaN 0 3149700 0 3149700 39491 52 14871 15275 61967 61967 VVVLGLLPR 9 0 1 Unmodified _VVVLGLLPR_ 0 0 0 M0R389;A0A024R0L6;Q15102 M0R389 M0R389 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.3334 2 483.328945 964.643337 90527.86 0.56497 0.00027307 -0.98523 -0.00047619 -0.42026 -0.00020312 483.328691441707 488.332893123419 107.24 0.50835 107.24 106.95 107.46 7.6294E-06 86 32 5 0 0 0 0.0054551 2 68296 66.682 48.646 1 1.7788 1.7704 0 7914700 3374300 4540500 39492 52 14871 15275 61968;61969 61968 VVVLNCEPSK 10 1 0 Unmodified _VVVLNCEPSK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.8123 2 572.805174 1143.59579 80936.46 0.53536 0.00030666 -0.1098 -6.2894E-05 0.42556 0.00024376 572.805224488526 576.812145528332 41.926 0.44791 41.926 41.704 42.152 0 129 33 5 0 0 0 0.00051176 2 22103 85.676 29.242 1 0.95521 0.93753 0 22943000 11995000 10948000 39493 1741 14872 15276 61970;61971 61970 VVVLNCEPSK 10 1 0 Unmodified _VVVLNCEPSK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 572.8057 2 572.805174 1143.59579 80646.02 0.24275 0.00013905 0.22748 0.0001303 0.47023 0.00026935 572.8057239264 576.812158446622 47.871 0.61729 47.871 47.534 48.152 0 151 39 6 0 0 0 0.039394 1 23314 39.022 7.9482 1 1.1185 0.89016 0 2961800 1269500 1692300 39494 1741 14872 15276 61972 61972 VVVPELSAGVASR 13 0 1 Unmodified _VVVPELSAGVASR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.3701 2 642.369527 1282.7245 75758.33 0.73357 0.00047122 -0.055511 -3.5659E-05 0.67806 0.00043556 642.369475179426 647.373561220364 83.088 0.60905 83.088 82.883 83.492 0 367 51 9 0 0 0 0.00012004 2 49633 90.913 90.913 1 0.73709 0.84249 0 125890000 72213000 53680000 39495 1942 14873 15277 61973;61974 61973 VVVPELSAGVASR 13 0 1 Unmodified _VVVPELSAGVASR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 642.371 2 642.369527 1282.7245 74949.09 0.53824 0.00034575 0.15754 0.0001012 0.69578 0.00044695 642.369552808561 647.373629108929 82.098 0.67991 82.098 81.787 82.467 0 354 60 9 0 0 0 0.00011686 2 50130 88.441 76.143 1 0.73318 0.85047 0 319060000 176800000 142260000 39496 1942 14873 15277 61975;61976 61975 VVVPELSAGVASR 13 0 1 Unmodified _VVVPELSAGVASR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 642.3701 2 642.369527 1282.7245 76004.79 0.76415 0.00049087 -0.013921 -8.9427E-06 0.75023 0.00048192 642.369741939478 647.373573569925 95.124 0.8563 95.124 94.818 95.674 7.6294E-06 296 61 8 0 0 0 0.0012299 2 53222 58.676 58.676 1 1.5765 1.2851 0 15226000 6485900 8740300 39497 1942 14873 15277 61977;61978 61978 VVVPELSAGVASR 13 0 1 Unmodified _VVVPELSAGVASR_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.8708 2 642.369527 1282.7245 78395.15 0.5993 0.00038497 0.22066 0.00014174 0.81996 0.00052671 642.370080688538 647.373715099711 94.995 0.82567 94.995 94.69 95.515 0 282 56 8 0 0 0 0.00028723 2 52334 66.262 66.262 1 1.5067 1.2218 0 11955000 4545300 7409900 39498 1942 14873 15277 61979;61980 61980 VVVPEVPLGIFR 12 0 1 Unmodified _VVVPEVPLGIFR_ 0 0 0 Q9NSI6;Q5R2U6;H0Y463;H7BZR9 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.9034 2 662.903005 1323.79146 76063.48 0.65809 0.00043625 -0.044351 -2.9401E-05 0.61373 0.00040685 662.902947830308 667.907071226387 125.09 0.54715 125.09 124.86 125.41 7.6294E-06 189 37 7 0 0 0 0.00022558 2 81304 83.948 83.948 1 0.82166 0.83645 0 18519000 10005000 8513900 39499 2068 14874 15278 61981;61982 61981 VVVPEVPLGIFR 12 0 1 Unmodified _VVVPEVPLGIFR_ 0 0 0 Q9NSI6;Q5R2U6;H0Y463;H7BZR9 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.9044 2 662.903005 1323.79146 76419.53 1.0595 0.00070232 0.016328 1.0824E-05 1.0758 0.00071314 662.902954989872 667.907070547119 124.65 0.57848 124.65 124.39 124.97 0 190 38 7 0 0 0 9.0777E-05 1 82957 96.331 96.331 1 0.76609 0.81123 0 23718000 12538000 11180000 39500 2068 14874 15278 61983 61983 VVVQVLAEEPEAVLK 15 1 0 Unmodified _VVVQVLAEEPEAVLK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.9804 2 811.971813 1621.92907 68743 1.0945 0.00088871 0.018397 1.4938E-05 1.1129 0.00090365 811.971799666982 815.978892620641 110.3 0.47405 110.3 110.14 110.61 0 176 34 8 0 0 0 0.00022308 2 69162 75.045 75.045 1 1.6673 1.8272 0 52627000 19890000 32736000 39501 587 14875 15279 61984;61985 61984 VVVQVLAEEPEAVLK 15 1 0 Unmodified _VVVQVLAEEPEAVLK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 815.9796 2 811.971813 1621.92907 68958.1 0.73604 0.00059764 -0.085545 -6.946E-05 0.65049 0.00052818 811.971757406145 815.978869173515 109.7 0.411 109.7 109.54 109.95 0 147 27 7 0 0 0 1.6709E-10 2 70405 120.96 120.96 1 1.7283 1.8213 0 35245000 13064000 22181000 39502 587 14875 15279 61986;61987 61986 VVVSGLPPSGSWQDLK 16 1 0 Unmodified _VVVSGLPPSGSWQDLK_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3KSR8 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 838.9597 2 834.951412 1667.88827 65921.98 0.87067 0.00072697 0.44779 0.00037389 1.3185 0.0011009 834.951654783222 838.958897044066 100.82 1.6777 100.82 100.02 101.7 0 752 132 7 0 0 0 1.6908E-24 3 61837 138.89 138.89 1 1.0615 1.2126 0 180810000 83992000 96819000 39503 1333 14876 15280 61988;61989;61990 61988 VVVSGLPPSGSWQDLK 16 1 0 Unmodified _VVVSGLPPSGSWQDLK_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3KSR8 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 838.9589 2 834.951412 1667.88827 66605.11 0.78621 0.00065645 0.22418 0.00018718 1.0104 0.00084363 835.452855884912 838.958707797323 100.17 1.6123 100.17 99.347 100.96 0 879 129 10 0 0 0 2.1647E-08 3 62899 100.38 100.38 1 1.1006 1.2581 0 158280000 80898000 77380000 39504 1333 14876 15280 61991;61992;61993 61992 VVVSGLPPSGSWQDLK 16 1 0 Unmodified _VVVSGLPPSGSWQDLK_ 0 0 0 J3KTL2;Q07955;Q59FA2;A8K1L8;J3KSR8 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 834.9525 2 834.951412 1667.88827 67012.87 0.72313 0.00060378 0.29997 0.00025046 1.0231 0.00085424 834.951523162377 838.958768982038 113.03 1.4192 113.03 112.46 113.88 0 421 70 9 0 0 0 0.016276 2 64631 30.55 30.55 1 0.77822 0.62498 0 17643000 8982000 8661300 39505 1333 14876 15280 61994;61995 61994 VVVTDVTSNFLTVTIK 16 1 0 Unmodified _VVVTDVTSNFLTVTIK_ 0 0 0 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 868.4973 2 868.495652 1734.97675 68780 1.018 0.00088409 -0.40355 -0.00035048 0.61441 0.00053362 868.997862313554 872.501433561583 120.67 0.15199 120.67 120.6 120.75 0 29 11 4 0 0 0 0.00018698 1 77847 60.49 60.49 1 1.075 1.1223 0 3982400 1680800 2301600 39506 2052 14877 15281 61996 61996 VVVTDVTSNFLTVTIK 16 1 0 Unmodified _VVVTDVTSNFLTVTIK_ 0 0 0 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 872.5035 2 868.495652 1734.97675 65891.31 0.93824 0.00081486 -0.54215 -0.00047086 0.39609 0.000344 868.996776365007 872.502275772324 133 0.37259 133 132.79 133.17 1.5259E-05 68 17 6 0 0 0 0.0018591 1 80950 43.382 43.382 1 1.2168 0.95153 0 3235900 1195400 2040600 39507 2052 14877 15281 61997 61997 VVVTDVTSNFLTVTIK 16 1 0 Unmodified _VVVTDVTSNFLTVTIK_ 0 0 0 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 873.0053 2 868.495652 1734.97675 69761.76 0.9013 0.00078277 -0.6802 -0.00059075 0.2211 0.00019203 868.495160528808 872.502489951177 132.78 0.38069 132.78 132.56 132.95 0 52 16 5 0 0 0 8.1014E-07 1 79840 97.551 97.551 1 1.0659 0.87146 0 4772200 2303100 2469100 39508 2052 14877 15281 61998 61998 VVVTVEQTEEELER 14 0 1 Unmodified _VVVTVEQTEEELER_ 0 0 0 A0A024R277;O15269 A0A024R277 A0A024R277 SPTLC1 Serine palmitoyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.4255 2 830.425424 1658.8363 68642.84 0.77581 0.00064425 0.3969 0.0003296 1.1727 0.00097385 830.425760429448 835.430537756802 82.651 0.19846 82.651 82.55 82.748 0 41 15 4 0 0 0 1.6455E-06 1 49444 107.83 101.3 1 0.82826 0.83034 0 9084100 4990200 4094000 39509 107 14878 15282 61999 61999 VVVTVEQTEEELER 14 0 1 Unmodified _VVVTVEQTEEELER_ 0 0 0 A0A024R277;O15269 A0A024R277 A0A024R277 SPTLC1 Serine palmitoyltransferase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.4328 2 830.425424 1658.8363 NaN NaN NaN 0.63847 0.0005302 NaN NaN NaN NaN 81.904 0.28819 81.904 81.704 81.993 0 0 0 0 1.76E-15 1 50059 128.28 103.43 1 NaN NaN 0 6547000 0 6547000 39510 107 14878 15282 62000 62000 VVVVQAISALCQK 13 1 0 Unmodified _VVVVQAISALCQK_ 0 0 0 Q9Y678;B3KW21;Q8WUI6;Q9NUP3;B3KND4;Q9H9B7;A0A140VK12;Q9UBF2 Q9Y678 Q9Y678 COPG1;COPG;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma;Coatomer subunit gamma-2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.9142 2 707.907962 1413.80137 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.15 1 97.15 96.65 97.65 0 0 0 0 0.0020554 1 60666 68.893 50.581 1 39511 2151 14879 15283 62001 62001 VVWNSSTVQQK 11 1 0 Unmodified _VVWNSSTVQQK_ 0 0 0 A0A087WVZ6;H7C4X9 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8413 2 638.338227 1274.6619 NaN NaN NaN 1.0095 0.00064443 NaN NaN NaN NaN 40.073 0.19666 40.073 39.95 40.147 0 0 0 0 0.035945 1 20901 48.423 31.184 1 NaN NaN 0 2787200 2787200 0 39512 422;1317 14880 15284 62002 62002 VVWNSSTVQQK 11 1 0 Unmodified _VVWNSSTVQQK_ 0 0 0 A0A087WVZ6;H7C4X9 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.3376 2 638.338227 1274.6619 79449.25 0.59536 0.00038004 -0.074986 -4.7866E-05 0.52038 0.00033218 638.337657060541 642.345578460748 38.976 0.19125 38.976 38.882 39.073 0 43 15 4 0 0 0 8.8417E-05 1 20548 97.635 87.854 1 0.58079 0.5865 0 8298900 4707800 3591100 39513 422;1317 14880 15284 62003 62003 VVWNSSTVQQK 11 1 0 Unmodified _VVWNSSTVQQK_ 0 0 0 A0A087WVZ6;H7C4X9 A0A087WVZ6;H7C4X9 A0A087WVZ6 ZMYND8 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.3462 2 638.338227 1274.6619 NaN NaN NaN -0.012741 -8.1334E-06 NaN NaN NaN NaN 45.863 0.41599 45.863 45.688 46.104 0 0 0 0 0.031576 1 21433 49.715 34.455 1 NaN NaN 0 996800 0 996800 39514 422;1317 14880 15284 62004 62004 VVWVEESDK 9 1 0 Unmodified _VVWVEESDK_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.7745 2 545.774396 1089.53424 83080.43 0.80149 0.00043743 0.83371 0.00045502 1.6352 0.00089245 545.774623851071 549.781763423638 48.486 0.41563 48.486 48.226 48.642 0 133 28 7 0 0 0 0.0036023 1 27168 71.379 61.468 1 1.6448 1.7561 0 36720000 17696000 19025000 39515 522 14881 15285 62005 62005 VVWVEESDKR 10 1 1 Unmodified _VVWVEESDKR_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 632.8376 2 623.824952 1245.63535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.582 1 35.582 35.082 36.082 0 0 0 0 0.00014769 1 17919 88.177 72.917 1 39516 522 14882 15286 62006 62006 VVWVEESDKR 10 1 1 Unmodified _VVWVEESDKR_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1 A0A0D9SFB3 A0A0D9SFB3 DDX3X ATP-dependent RNA helicase DDX3X ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 632.8368 2 623.824952 1245.63535 NaN NaN NaN 0.62024 0.00038692 NaN NaN NaN NaN 34.385 0.2007 34.385 34.268 34.469 0 0 0 0 0.0001146 2 17407 95.502 78.726 1 NaN NaN 0 4747600 0 4747600 39517 522 14882 15286 62007;62008 62007 VVYGGGAAEISCALAVSQEADK 22 1 0 Unmodified _VVYGGGAAEISCALAVSQEADK_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;Q96GI1;B4DX08;Q9HB74 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1102.0471 2 1098.03608 2194.0576 NaN NaN NaN -0.37494 -0.0004117 NaN NaN NaN NaN 103.65 0.37112 103.65 103.46 103.83 0 0 0 0 0.042579 1 64030 28.546 21.001 1 NaN NaN 0 3607200 0 3607200 39518 960 14883 15287 62009 62009 VVYGGGAAEISCALAVSQEADK 22 1 0 Unmodified _VVYGGGAAEISCALAVSQEADK_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;Q96GI1;B4DX08;Q9HB74 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1102.0452 2 1098.03608 2194.0576 58087.95 0.53646 0.00058906 -0.25367 -0.00027854 0.28279 0.00031051 1099.03727583096 1102.04383812791 115.84 0.34265 115.84 115.66 116 0 59 13 8 0 0 0 0.0018834 1 67907 32.702 32.702 1 1.6624 1.3177 0 4221800 1792700 2429100 39519 960 14883 15287 62010 62010 VVYGGGAAEISCALAVSQEADK 22 1 0 Unmodified _VVYGGGAAEISCALAVSQEADK_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;Q96GI1;B4DX08;Q9HB74 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1102.0417 2 1098.03608 2194.0576 59688.05 0.29161 0.0003202 -0.80033 -0.00087879 -0.50872 -0.00055859 1099.03790425284 1102.54422490334 115.73 0.34186 115.73 115.52 115.86 7.6294E-06 59 15 6 0 0 0 0.013983 1 66896 23.481 23.481 1 1.395 1.087 0 3499100 1306100 2193000 39520 960 14883 15287 62011 62011 VVYIFGPPVK 10 1 0 Unmodified _VVYIFGPPVK_ 0 0 0 B4DUT7;A0A140VJK6;P49915;Q53F90 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.8409 2 559.83406 1117.65357 84709.16 0.63445 0.00035519 -0.19308 -0.00010809 0.44137 0.0002471 559.833932064039 563.840941520653 99.03 0.65588 99.03 98.708 99.364 0 163 52 5 0 0 0 0.001121 1 60486 75.854 52.426 1 3.0892 3.0401 0 9080700 2465200 6615500 39521 604 14884 15288 62012 62012 VVYIFGPPVK 10 1 0 Unmodified _VVYIFGPPVK_ 0 0 0 B4DUT7;A0A140VJK6;P49915;Q53F90 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.8416 2 559.83406 1117.65357 82631.91 0.71791 0.00040191 -0.018125 -1.0147E-05 0.69979 0.00039176 560.335450876206 563.841022529863 98.197 0.74094 98.197 97.802 98.543 0 157 65 5 0 0 0 0.0022385 1 61317 69.998 46.043 1 3.0576 3.1286 0 17449000 4978100 12471000 39522 604 14884 15288 62013 62013 VVYIFGPPVK 10 1 0 Unmodified _VVYIFGPPVK_ 0 0 0 B4DUT7;A0A140VJK6;P49915;Q53F90 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.8416 2 559.83406 1117.65357 82228.9 0.84524 0.0004732 -0.31791 -0.00017797 0.52734 0.00029522 560.33534664151 563.841058201073 111.67 0.31081 111.67 111.5 111.81 0 38 16 4 0 0 0 0.031007 1 64766 42.396 26.754 1 1.6179 1.395 0 1101000 376500 724510 39523 604 14884 15288 62014 62014 VVYSAFLMATPR 12 0 1 Oxidation (M) _VVYSAFLM(ox)ATPR_ VVYSAFLM(1)ATPR VVYSAFLM(63.62)ATPR 0 1 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 690.8661 2 685.86048 1369.70641 71766.54 1.0617 0.00072819 0.11356 7.7884E-05 1.1753 0.00080607 686.859340285589 690.86577191068 93.263 0.65642 93.263 92.929 93.585 0 173 54 5 0 0 0 0.00045296 1 56447 63.624 45.815 1 2.3025 2.4458 0 42490000 29301000 13189000 39524 794 14885 15289 62015 62015 641 VWAEYALK 8 1 0 Unmodified _VWAEYALK_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2659 2 490.26601 978.517468 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.123 1 69.123 68.623 69.623 0 0 0 0 0.038292 1 41117 58.917 36.786 1 39525 1854 14886 15290 62016 62016 VWDIAYLQEIEDPEEPDPK 19 1 0 Unmodified _VWDIAYLQEIEDPEEPDPK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1148.0527 2 1143.54426 2285.07396 56579.32 0.3014 0.00034466 0.24268 0.00027751 0.54407 0.00062217 1144.04662721103 1148.0534980848 121.35 0.68365 121.35 121.04 121.72 0 181 44 7 0 0 0 4.9101E-06 2 78407 80.522 75.524 1 1.0005 1.023 0 17753000 9218800 8534200 39526 1827 14887 15291 62017;62018 62018 VWDIAYLQEIEDPEEPDPK 19 1 0 Unmodified _VWDIAYLQEIEDPEEPDPK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1144.0454 2 1143.54426 2285.07396 56684.59 0.27722 0.00031701 0.3774 0.00043157 0.65462 0.00074858 1144.04671093239 1148.05437521661 120.92 0.71516 120.92 120.66 121.37 7.6294E-06 173 42 7 0 0 0 0.0002264 2 79962 60.628 55.549 1 0.94915 1.0276 0 22068000 12846000 9222400 39527 1827 14887 15291 62019;62020 62019 VWDIAYLQEIEDPEEPDPK 19 1 0 Unmodified _VWDIAYLQEIEDPEEPDPK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1144.0441 2 1143.54426 2285.07396 56356.98 0.16528 0.000189 0.31082 0.00035543 0.47609 0.00054443 1144.04567341486 1148.05328958572 133.7 0.73991 133.7 133.44 134.18 0 172 30 11 0 0 0 0.010294 1 81416 37.594 32.515 1 1.1243 0.89984 0 8677300 4173300 4504000 39528 1827 14887 15291 62021 62021 VWDIAYLQEIEDPEEPDPK 19 1 0 Unmodified _VWDIAYLQEIEDPEEPDPK_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1148.0532 2 1143.54426 2285.07396 56656.41 0.62603 0.0007159 -0.23427 -0.0002679 0.39177 0.000448 1144.04529546098 1148.05198364918 133.47 0.63869 133.47 133.21 133.85 0 157 24 11 0 0 0 0.016721 1 80367 23.881 21.095 1 1.1477 0.9376 0 8120400 3565600 4554800 39529 1827 14887 15291 62022 62022 VWDIAYLQEIEDPEEPDPKK 20 2 0 Unmodified _VWDIAYLQEIEDPEEPDPKK_ 0 0 1 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 805.7316 3 805.396917 2413.16892 68927.27 0.83301 0.0006709 -0.79578 -0.00064092 0.03723 2.9985E-05 805.730366631713 811.073914105291 112.25 0.38449 112.25 112.03 112.41 0 114 29 6 0 0 0 0.0043424 1 72608 23.447 23.447 1 0.90156 1.0285 0 12150000 5868800 6281100 39530 1827 14888 15292 62023 62023 VWDIAYLQEIEDPEEPDPKK 20 2 0 Unmodified _VWDIAYLQEIEDPEEPDPKK_ 0 0 1 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 811.075 3 805.396917 2413.16892 66389.23 0.81965 0.00066014 0.15961 0.00012855 0.97926 0.00078869 805.731263146163 811.074984241051 123.68 0.7713 123.68 123.33 124.1 -7.6294E-06 171 31 10 0 0 0 0.026551 2 73974 15.725 15.725 1 1.2308 1.0536 0 9219400 4380600 4838700 39531 1827 14888 15292 62024;62025 62025 VWDIAYLQEIEDPEEPDPKK 20 2 0 Unmodified _VWDIAYLQEIEDPEEPDPKK_ 0 0 1 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 805.3994 3 805.396917 2413.16892 67598.02 0.77868 0.00062715 0.22862 0.00018413 1.0073 0.00081128 805.730995452519 811.074973989656 123.54 0.75165 123.54 123.14 123.89 0 166 31 11 0 0 0 0.041998 2 72925 10.765 10.765 1 1.2843 1.0888 0 6353100 2354500 3998600 39532 1827 14888 15292 62026;62027 62026 VWDISTVSSVNEAFGR 16 0 1 Unmodified _VWDISTVSSVNEAFGR_ 0 0 0 Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1;B4DJV5 Q9BV37 Q9BV37 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 888.9449 2 883.939033 1765.86351 63739.89 0.72821 0.00064369 -0.075467 -6.6708E-05 0.65274 0.00057698 883.939268887942 888.94315219413 121.64 0.59271 121.64 121.43 122.02 0 169 30 9 0 0 0 6.0274E-46 3 72389 175.48 175.48 1 1.0982 0.91065 0 20457000 10061000 10395000 39533 339 14889 15293 62028;62029;62030 62030 VWDIVR 6 0 1 Unmodified _VWDIVR_ 0 0 0 A0A087WYP7;Q12788;J3KNP2 A0A087WYP7;Q12788 Q12788 TBL3 Transducin beta-like protein 3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 399.2303 2 394.226688 786.438824 NaN NaN NaN 0.031086 1.2255E-05 NaN NaN NaN NaN 67.301 0.88 67.301 66.951 67.831 0 0 0 0 0.053461 1 38783 69.093 48.108 1 NaN NaN 0 13927000 0 13927000 39534 1698;436 14890 15294 62031 62031 VWDLAQQVVLSSYR 14 0 1 Unmodified _VWDLAQQVVLSSYR_ 0 0 0 H0Y711;A0A024R0H7;Q9BQA1 H0Y711 H0Y711 WDR77 Methylosome protein 50 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.4497 2 832.443754 1662.87296 NaN NaN NaN -0.33999 -0.00028302 NaN NaN NaN NaN 114.2 0.46928 114.2 114.01 114.48 0 0 0 0 1.405E-06 1 74223 102.62 89.665 1 NaN NaN 0 3546600 0 3546600 39535 47 14891 15295 62032 62032 VWDPDNPLTDR 11 0 1 Unmodified _VWDPDNPLTDR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.3188 2 664.317491 1326.62043 73986.88 0.76166 0.00050598 -0.13321 -8.8491E-05 0.62845 0.00041749 664.31750354203 669.321667770795 79.493 0.66633 79.493 79.218 79.885 0 292 58 7 0 0 0 0.00093586 1 47126 71.349 63.129 1 0.65235 0.69373 0 42905000 25730000 17175000 39536 168 14892 15296 62033 62033 VWDPDNPLTDR 11 0 1 Unmodified _VWDPDNPLTDR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.3222 2 664.317491 1326.62043 72819.09 0.45425 0.00030177 0.20081 0.0001334 0.65506 0.00043517 664.317447896134 669.32191840879 78.547 0.73337 78.547 78.228 78.962 0 317 63 6 0 0 0 0.00047879 2 47547 75.294 73.067 1 0.65131 0.75073 0 72614000 45393000 27221000 39537 168 14892 15296 62034;62035 62034 VWDPDNPLTDR 11 0 1 Unmodified _VWDPDNPLTDR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.3179 2 664.317491 1326.62043 74293.38 0.63762 0.00042358 0.46542 0.00030919 1.103 0.00073277 664.317601457165 669.322030346969 90.492 0.72199 90.492 90.258 90.98 0 242 43 9 0 0 0 0.0019892 1 50237 63.283 63.283 1 1.7789 1.455 0 13580000 5172200 8408200 39538 168 14892 15296 62036 62036 VWDPDNPLTDR 11 0 1 Unmodified _VWDPDNPLTDR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 669.3225 2 664.317491 1326.62043 74346.96 0.45044 0.00029924 0.36605 0.00024317 0.81649 0.00054241 664.317563343609 669.321881633555 90.534 0.74201 90.534 90.245 90.987 0 218 43 8 0 0 0 0.030651 1 49240 38.567 34.804 1 1.6487 1.3433 0 12630000 5117700 7511900 39539 168 14892 15296 62037 62037 VWDPNSPLTDR 11 0 1 Unmodified _VWDPNSPLTDR_ 0 0 0 E7EQY4;E7EV10;Q9BTC8;E9PCS8;D6W5A2;Q53RX8 E7EQY4 E7EQY4 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.3243 2 650.320034 1298.62551 NaN NaN NaN 0.28781 0.00018717 NaN NaN NaN NaN 79.871 0.63081 79.871 79.583 80.214 0 0 0 0 0.0051146 1 43143 65.305 49.643 1 NaN NaN 0 2007700 0 2007700 39540 1221 14893 15297 62038 62038 VWDVESGSLK 10 1 0 Unmodified _VWDVESGSLK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.2968 2 560.287671 1118.56079 80963.76 0.90444 0.00050675 0.20775 0.0001164 1.1122 0.00062315 560.287563198514 564.29498404472 65.774 0.6839 65.774 65.341 66.025 -7.6294E-06 330 62 8 0 0 0 0.00013082 2 37825 96.331 80.95 1 0.78691 0.88788 0 78519000 46119000 32400000 39541 1792 14894 15298 62039;62040 62040 VWDVESGSLK 10 1 0 Unmodified _VWDVESGSLK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.295 2 560.287671 1118.56079 81024.28 0.52549 0.00029443 0.33091 0.0001854 0.8564 0.00047983 560.287678715883 564.294881166902 64.601 0.72496 64.601 64.173 64.898 0 308 64 7 0 0 0 0.00013082 2 38051 96.331 86.743 1 0.81508 0.91165 0 85701000 49775000 35926000 39542 1792 14894 15298 62041;62042 62042 VWDVESGSLK 10 1 0 Unmodified _VWDVESGSLK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.295 2 560.287671 1118.56079 81068.23 0.60143 0.00033697 0.10569 5.9219E-05 0.70712 0.00039619 560.287622260422 564.29475123201 75.447 0.7482 75.447 75.046 75.794 0 292 54 8 0 0 0 0.0037552 2 40067 63.076 53.488 1 1.1912 0.92242 0 13082000 6022700 7059300 39543 1792 14894 15298 62043;62044 62044 VWDVESGSLK 10 1 0 Unmodified _VWDVESGSLK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 560.288 2 560.287671 1118.56079 80723.81 0.45171 0.00025309 0.21953 0.000123 0.67123 0.00037608 560.287698523882 564.294823646597 75.852 0.81388 75.852 75.421 76.235 0 261 56 7 0 0 0 0.025149 1 39439 44.753 44.753 1 1.1909 0.97582 0 12481000 5763400 6718100 39544 1792 14894 15298 62045 62045 VWELGGCANK 10 1 0 Unmodified _VWELGGCANK_ 0 0 0 Q6IAX9;P08240;A0A024R3M0 Q6IAX9 Q6IAX9 SRPR Signal recognition particle receptor subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 567.2723 2 567.274041 1132.53353 81516.71 0.25319 0.00014363 1.0203 0.00057881 1.2735 0.00072244 567.775149468637 571.283233432247 52.992 0.58212 52.992 52.75 53.332 0 85 43 5 0 0 0 0.0098473 2 29542 54.157 50.318 1 1.1944 1.2331 0 14643000 7451500 7191900 39545 1455 14895 15299 62046;62047 62046 VWILTDDSDIYK 12 1 0 Unmodified _VWILTDDSDIYK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.379 2 734.371932 1466.72931 70806.66 0.8487 0.00062326 -0.062564 -4.5945E-05 0.78614 0.00057732 734.371781355521 738.379131740283 107.3 0.75052 107.3 106.93 107.68 -7.6294E-06 284 56 6 0 0 0 4.8821E-08 2 66780 114.4 114.4 1 0.87544 0.88194 0 27190000 15414000 11776000 39546 716 14896 15300 62048;62049 62049 VWILTDDSDIYK 12 1 0 Unmodified _VWILTDDSDIYK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 734.372 2 734.371932 1466.72931 70783.11 0.91696 0.00067339 -0.36686 -0.00026942 0.5501 0.00040397 734.371577050197 738.378939876379 106.67 0.76022 106.67 106.34 107.1 0 273 56 6 0 0 0 0.0003692 2 67822 72.006 72.006 1 0.91772 0.93781 0 31538000 16584000 14955000 39547 716 14896 15300 62050;62051 62051 VWILTDDSDIYK 12 1 0 Unmodified _VWILTDDSDIYK_ 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 738.3806 2 734.371932 1466.72931 73476.65 0.84418 0.00061994 -0.067085 -4.9265E-05 0.77709 0.00057068 734.372012530423 738.37916430215 118.35 0.62165 118.35 118.1 118.72 -7.6294E-06 93 26 5 0 0 0 0.015684 1 69851 42.718 42.718 1 1.4644 1.1487 0 3917200 1650300 2266900 39548 716 14896 15300 62052 62052 VWILTDDSDIYKK 13 2 0 Unmodified _VWILTDDSDIYKK_ 0 0 1 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.9495 3 532.615368 1594.82427 NaN NaN NaN -0.27671 -0.00014738 NaN NaN NaN NaN 88.039 0.26452 88.039 87.871 88.136 0 0 0 0 0.02303 1 54308 42.809 28.846 1 NaN NaN 0 13610000 13610000 0 39549 716 14897 15301 62053 62053 VWILTDDSDIYKK 13 2 0 Unmodified _VWILTDDSDIYKK_ 0 0 1 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.9565 3 532.615368 1594.82427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.014 1 88.014 87.514 88.514 7.6294E-06 0 0 0 0.023237 1 54299 41.227 24.799 1 39550 716 14897 15301 62054 62054 VWILTDDSDIYKK 13 2 0 Unmodified _VWILTDDSDIYKK_ 0 0 1 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.6155 3 532.615368 1594.82427 83069.02 0.35758 0.00019045 -0.35925 -0.00019134 -0.0016718 -8.9044E-07 532.615382856181 537.957850346608 101.38 0.59673 101.38 101.11 101.7 0 204 40 7 0 0 0 0.029219 1 57444 25.982 25.982 1 1.2563 1.0816 0 6106600 2524800 3581900 39551 716 14897 15301 62055 62055 VWILTDDSDIYKK 13 2 0 Unmodified _VWILTDDSDIYKK_ 0 0 1 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.293 3 532.615368 1594.82427 83143.11 0.40907 0.00021788 -0.18235 -9.7124E-05 0.22671 0.00012075 532.61542358391 537.958129529316 101.16 0.64717 101.16 100.87 101.51 0 187 39 8 0 0 0 0.056529 1 56379 14.791 14.791 1 1.2887 1.0954 0 5730900 2576300 3154600 39552 716 14897 15301 62056 62056 VWLDPNETNEIANANSR 17 0 1 Unmodified _VWLDPNETNEIANANSR_ 0 0 0 J3QR09;J3KTE4;Q53G49;P84098;J3QL15;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 977.4719 2 971.96631 1941.91807 61136.57 0.31589 0.00030704 0.27545 0.00026773 0.59134 0.00057476 972.468102262134 976.970697369409 86.218 1.0637 86.218 85.812 86.876 7.6294E-06 624 83 10 0 0 0 8.0877E-18 5 51739 126.1 126.1 1 0.57593 0.68126 0 298770000 190450000 108320000 39553 1331 14898 15302 62057;62058;62059;62060;62061 62058 VWLDPNETNEIANANSR 17 0 1 Unmodified _VWLDPNETNEIANANSR_ 0 0 0 J3QR09;J3KTE4;Q53G49;P84098;J3QL15;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 971.9675 2 971.96631 1941.91807 61414 0.34418 0.00033453 -0.05133 -4.9891E-05 0.29285 0.00028464 971.966236011956 976.970574995787 85.566 0.91348 85.566 85.074 85.988 0 546 71 11 0 0 0 2.8418E-34 3 52485 156.24 156.24 1 0.59145 0.68701 0 356890000 227740000 129150000 39554 1331 14898 15302 62062;62063;62064 62063 VWLDPNETNEIANANSR 17 0 1 Unmodified _VWLDPNETNEIANANSR_ 0 0 0 J3QR09;J3KTE4;Q53G49;P84098;J3QL15;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 977.4728 2 971.96631 1941.91807 60135.69 0.056406 5.4825E-05 0.066571 6.4705E-05 0.12298 0.00011953 971.966676130738 976.970658349799 98.476 1.5461 98.476 98.15 99.696 0 664 90 12 0 0 0 2.0018E-13 4 55446 124.07 124.07 1 0.98086 0.84828 0 117070000 59623000 57445000 39555 1331 14898 15302 62065;62066;62067;62068 62065 VWLDPNETNEIANANSR 17 0 1 Unmodified _VWLDPNETNEIANANSR_ 0 0 0 J3QR09;J3KTE4;Q53G49;P84098;J3QL15;Q8IWR8 J3QR09 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 976.9695 2 971.96631 1941.91807 60835.21 0.20624 0.00020046 -0.023172 -2.2522E-05 0.18307 0.00017794 972.46768171574 976.970570029035 98.426 1.4109 98.426 98.131 99.542 7.6294E-06 684 86 12 0 0 0 8.0877E-18 5 54595 126.1 126.1 1 0.95708 0.83564 0 128290000 64434000 63856000 39556 1331 14898 15302 62069;62070;62071;62072;62073 62069 VWLIDDILEK 10 1 0 Unmodified _VWLIDDILEK_ 0 0 0 F5GY32;A0A024RBS6;F5H1S9;G8JLB3;E5KMT6;E5KMT5;Q9Y606 F5GY32 F5GY32 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.3583 2 622.350271 1242.68599 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.49 1 125.49 124.99 125.99 7.6294E-06 0 0 0 0.0099205 1 81590 57.598 27.035 1 39557 346 14899 15303 62074 62074 VWNLANCK 8 1 0 Unmodified _VWNLANCK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6REE5;D6RFX4;B4DVD2;H0Y8R5;D6RBD0 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 506.7599 2 502.752744 1003.49094 85183.04 0.28388 0.00014272 -0.54193 -0.00027246 -0.25805 -0.00012974 502.752264874809 506.759730390487 49.722 0.56989 49.722 49.387 49.957 -3.8147E-06 154 38 6 0 0 0 0.0019669 2 27320 104.11 83.556 1 1.2859 1.398 0 47583000 21264000 26319000 39558 1227 14900 15304 62075;62076 62075 VWNLANCK 8 1 0 Unmodified _VWNLANCK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6REE5;D6RFX4;B4DVD2;H0Y8R5;D6RBD0 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 506.7601 2 502.752744 1003.49094 84081.36 0.61295 0.00030816 -0.24215 -0.00012174 0.3708 0.00018642 502.752342588264 506.759878209394 48.389 0.52621 48.389 48.165 48.691 0 172 37 8 0 0 0 0.00069603 1 27045 128.75 104.78 1 1.34 1.4921 0 51376000 19417000 31959000 39559 1227 14900 15304 62077 62077 VWNVAENSYVETLFGHQDAVAALDALSR 28 0 1 Unmodified _VWNVAENSYVETLFGHQDAVAALDALSR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1026.5128 3 1025.84386 3074.50976 59229.88 0.57037 0.00058511 0.2304 0.00023636 0.80077 0.00082147 1026.17827082467 1029.51458144067 133.06 0.63077 133.06 132.66 133.29 0 119 26 10 0 0 0 5.3118E-07 3 86927 44.596 44.596 1 0.67848 0.70152 0 23504000 13546000 9958200 39560 1389 14901 15305 62078;62079;62080 62080 VWNVAENSYVETLFGHQDAVAALDALSR 28 0 1 Unmodified _VWNVAENSYVETLFGHQDAVAALDALSR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1026.1809 3 1025.84386 3074.50976 59982.41 0.64786 0.00066461 -0.15155 -0.00015547 0.49631 0.00050914 1026.51256515771 1029.5137116485 132.63 0.92651 132.63 132.15 133.08 0 313 52 8 0 0 0 2.929E-17 1 89006 74.287 74.287 1 0.62013 0.62101 0 17145000 8755500 8389900 39561 1389 14901 15305 62081 62081 VWQVTIGTR 9 0 1 Unmodified _VWQVTIGTR_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0YAF8;D6RHH4;H0Y8R5;D6RF23;D6RHJ5 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.3019 2 530.300916 1058.58728 NaN NaN NaN 0.75282 0.00039922 NaN NaN NaN NaN 75.021 1.0579 75.021 74.261 75.319 0 0 0 0 0.0027333 1 44142 79.906 52.382 1 NaN NaN 0 33001000 33001000 0 39562 1227 14902 15306 62082 62082 VWQVTIGTR 9 0 1 Unmodified _VWQVTIGTR_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0YAF8;D6RHH4;H0Y8R5;D6RF23;D6RHJ5 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.3018 2 530.300916 1058.58728 NaN NaN NaN 0.99005 0.00052503 NaN NaN NaN NaN 73.717 0.84882 73.717 73.195 74.044 0 0 0 0 0.00029153 1 44358 92.439 55.419 1 NaN NaN 0 30182000 30182000 0 39563 1227 14902 15306 62083 62083 VYAEVNSLR 9 0 1 Unmodified _VYAEVNSLR_ 0 0 0 P19784;H3BNI9 P19784 P19784 CSNK2A2 Casein kinase II subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.7825 2 525.782556 1049.55056 87461.41 0.22772 0.00011973 -0.034667 -1.8227E-05 0.19305 0.0001015 525.782506100436 530.78679117029 45.168 0.41585 45.168 44.976 45.392 0 108 36 4 0 0 0 0.019235 1 24776 51.346 23.464 1 1.6375 1.6112 0 13350000 5657400 7693000 39564 1501 14903 15307 62084 62084 VYAILTHGIFSGPAISR 17 0 1 Unmodified _VYAILTHGIFSGPAISR_ 0 0 0 Q53FW2;P60891;B1ALA9;B7ZB02;A0A140VK41;P11908;B2R860;H7C540 Q53FW2;A0A140VK41 Q53FW2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 605.0074 3 601.336828 1800.98865 81104.95 0.75284 0.00045271 -0.2359 -0.00014186 0.51694 0.00031085 601.671017797652 604.672681554866 106.38 0.93796 106.38 105.98 106.92 -7.6294E-06 321 68 8 0 0 0 1.6148E-05 1 65935 77.221 77.221 1 2.5138 2.6109 0 22376000 6179000 16197000 39565 1626;616 14904 15308 62085 62085 VYAILTHGIFSGPAISR 17 0 1 Unmodified _VYAILTHGIFSGPAISR_ 0 0 0 Q53FW2;P60891;B1ALA9;B7ZB02;A0A140VK41;P11908;B2R860;H7C540 Q53FW2;A0A140VK41 Q53FW2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.0078 3 601.336828 1800.98865 79855.61 0.78483 0.00047195 0.0018228 1.0961E-06 0.78665 0.00047304 601.670972548671 604.672903059422 105.31 0.83617 105.31 104.81 105.65 0 312 61 7 0 0 0 4.6441E-05 2 66565 54.768 54.768 1 2.2719 2.5837 0 49063000 14486000 34577000 39566 1626;616 14904 15308 62086;62087 62086 VYAILTHGIFSGPAISR 17 0 1 Unmodified _VYAILTHGIFSGPAISR_ 0 0 0 Q53FW2;P60891;B1ALA9;B7ZB02;A0A140VK41;P11908;B2R860;H7C540 Q53FW2;A0A140VK41 Q53FW2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 604.6731 3 601.336828 1800.98865 78816.34 0.38566 0.00023191 0.11207 6.7393E-05 0.49773 0.0002993 601.671166441913 604.673018340901 116.42 0.46706 116.42 116.25 116.72 -7.6294E-06 89 19 7 0 0 0 0.002169 1 68371 33.667 33.667 1 1.6063 1.3649 0 5261900 1692500 3569400 39567 1626;616 14904 15308 62088 62088 VYAILTHGIFSGPAISR 17 0 1 Unmodified _VYAILTHGIFSGPAISR_ 0 0 0 Q53FW2;P60891;B1ALA9;B7ZB02;A0A140VK41;P11908;B2R860;H7C540 Q53FW2;A0A140VK41 Q53FW2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.6731 3 601.336828 1800.98865 78350.69 0.90747 0.00054569 -0.29424 -0.00017694 0.61323 0.00036876 601.670826628867 604.67271631518 116.21 0.4424 116.21 116.01 116.45 -7.6294E-06 95 21 7 0 0 0 0.00044922 1 67274 40.693 40.693 1 1.8302 1.5541 0 4630200 1599700 3030500 39568 1626;616 14904 15308 62089 62089 VYASSGDGEVYVWDVNSR 18 0 1 Unmodified _VYASSGDGEVYVWDVNSR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7;J3QR85;J3QRG0 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1002.4628 2 1001.96069 2001.90683 60511.16 0.48452 0.00048547 -0.19606 -0.00019644 0.28846 0.00028903 1002.461606979 1006.96443407867 89.662 1.022 89.662 89.321 90.343 7.6294E-06 296 87 6 0 0 0 2.5133E-16 2 55308 115.12 98.866 1 0.51033 0.55837 0 33879000 19392000 14486000 39569 876 14905 15309 62090;62091 62091 VYASSGDGEVYVWDVNSR 18 0 1 Unmodified _VYASSGDGEVYVWDVNSR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7;J3QR85;J3QRG0 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1007.4648 2 1001.96069 2001.90683 60738.39 0.27488 0.00027542 0.30363 0.00030422 0.57851 0.00057965 1002.46254295418 1007.46636782319 103.41 0.85574 103.41 102.97 103.83 0 275 55 8 0 0 0 0.00099345 4 58609 38.3 32.197 1 1.3415 1.0978 0 13374000 5862700 7511400 39570 876 14905 15309 62092;62093;62094;62095 62094 VYASSGDGEVYVWDVNSR 18 0 1 Unmodified _VYASSGDGEVYVWDVNSR_ 0 0 0 B2RAX6;Q9Y5J1;J3KSR7;J3QR85;J3QRG0 B2RAX6 B2RAX6 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1006.9648 2 1001.96069 2001.90683 61108.11 0.019796 1.9835E-05 0.34725 0.00034793 0.36705 0.00036777 1002.46252828363 1007.46644116483 103.29 0.70741 103.29 102.96 103.66 -7.6294E-06 323 48 8 0 0 0 6.4114E-05 3 57690 53.754 47.65 1 1.2491 1.0093 0 11480000 5043300 6436900 39571 876 14905 15309 62096;62097;62098 62096 VYATILNAGTNTDGFK 16 1 0 Unmodified _VYATILNAGTNTDGFK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.9372 2 842.930677 1683.8468 NaN NaN NaN 1.3913 0.0011728 NaN NaN NaN NaN 90.29 0.49785 90.29 90.023 90.521 0 0 0 0 4.7541E-07 2 54564 91.62 74.707 1 NaN NaN 0 6818500 0 6818500 39572 587 14906 15310 62099;62100 62100 VYATILNAGTNTDGFK 16 1 0 Unmodified _VYATILNAGTNTDGFK_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.9284 2 842.930677 1683.8468 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.132 1 89.132 88.632 89.632 0 0 0 0 0.049183 1 54999 38.584 2.0594 1 39573 587 14906 15310 62101 62101 VYDPASPQR 9 0 1 Unmodified _VYDPASPQR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.7593 2 516.759081 1031.50361 NaN NaN NaN -0.1544 -7.9788E-05 NaN NaN NaN NaN 25.076 0.37165 25.076 24.883 25.254 -1.9073E-06 0 0 0 2.915E-05 1 10658 107.9 58.454 1 NaN NaN 0 37269000 37269000 0 39574 1859 14907 15311 62102 62102 VYDPASPQR 9 0 1 Unmodified _VYDPASPQR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.7607 2 516.759081 1031.50361 84028.77 0.50149 0.00025915 -1.4276 -0.00073771 -0.92608 -0.00047856 516.758828777607 521.763197084196 24.878 0.60157 24.878 24.552 25.153 0 138 26 9 0 0 0 1.8757E-05 2 10486 119.29 86.82 1 0.98904 1.1251 0 116500000 62932000 53571000 39575 1859 14907 15311 62103;62104 62104 VYDPASPQR 9 0 1 Unmodified _VYDPASPQR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.7593 2 516.759081 1031.50361 83433.07 0.35195 0.00018187 -0.2213 -0.00011436 0.13065 6.7516E-05 516.758648686055 521.7630946415 27.845 0.4894 27.845 27.615 28.104 0 73 20 5 0 0 0 0.0036023 2 10931 71.379 59.023 1 1.2699 1.0365 0 15588000 6707600 8880700 39576 1859 14907 15311 62105;62106 62106 VYDPASPQR 9 0 1 Unmodified _VYDPASPQR_ 0 0 0 Q6RFH5;E9PS41 Q6RFH5 Q6RFH5 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 521.7628 2 516.759081 1031.50361 83300.98 -0.026294 -1.3587E-05 -0.042019 -2.1714E-05 -0.068313 -3.5301E-05 516.758902378743 521.76309245455 28.001 0.89465 28.001 27.392 28.287 -1.9073E-06 154 38 8 0 0 0 0.010772 2 10473 58.981 48.994 1 1.1619 0.94229 0 11979000 5653600 6325200 39577 1859 14907 15311 62107;62108 62107 VYDQMPEPR 9 0 1 Oxidation (M) _VYDQM(ox)PEPR_ VYDQM(1)PEPR VYDQM(43.08)PEPR 0 1 0 F5H5N1;B7Z1U1;A8K0V6;Q8NAS7;Q7LD69;F5GXJ1;O75251 F5H5N1 F5H5N1 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.7681 2 575.763506 1149.51246 NaN NaN NaN NaN NaN NaN NaN NaN NaN 21.805 1 21.805 21.305 22.305 0 0 0 0 0.032187 1 8015 43.083 11.854 1 39578 700 14908 15312 62109 62109 543 VYEGERPLTK 10 1 1 Unmodified _VYEGERPLTK_ 0 0 1 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.3224 2 596.322045 1190.62954 78909.38 0.70339 0.00041945 -2.3203 -0.0013837 -1.6169 -0.00096421 596.321696341334 605.331824870258 22.213 0.53454 22.213 22.04 22.575 0 111 31 7 0 0 0 0.02503 1 8385 71.03 39.075 1 0.80764 0.92333 0 25755000 13332000 12423000 39579 1466 14909 15313 62110 62110 VYEGERPLTK 10 1 1 Unmodified _VYEGERPLTK_ 0 0 1 V9HWB4;P11021 V9HWB4 V9HWB4 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 605.3348 2 596.322045 1190.62954 76719 0.10167 6.0629E-05 -0.0015569 -9.284E-07 0.10011 5.97E-05 596.321821040694 605.333565168718 21.963 0.30659 21.963 21.801 22.107 0 56 12 7 0 0 0 0.0084446 1 8008 73.067 73.067 1 0.6835 0.79709 0 45327000 25270000 20057000 39580 1466 14909 15313 62111 62111 VYEIPGLEPITFAGK 15 1 0 Unmodified _VYEIPGLEPITFAGK_ 0 0 0 Q9BZE1;S4R369 Q9BZE1 Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 821.4538 2 817.445431 1632.87631 71893.16 0.81358 0.00066505 -0.045714 -3.7369E-05 0.76786 0.00062769 817.947030526449 821.953979927445 119.75 0.42715 119.75 119.56 119.98 0 100 27 5 0 0 0 0.0064749 1 77225 39.918 39.918 1 1.5783 1.597 0 5699400 2692600 3006800 39581 2020 14910 15314 62112 62112 VYEIPGLEPITFAGK 15 1 0 Unmodified _VYEIPGLEPITFAGK_ 0 0 0 Q9BZE1;S4R369 Q9BZE1 Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 821.453 2 817.445431 1632.87631 72324.05 1.0133 0.00082832 -0.31137 -0.00025453 0.70193 0.00057379 817.946318755456 821.452175411047 119.26 0.39709 119.26 119.09 119.49 0 108 27 6 0 0 0 0.0042985 1 78601 54.259 54.259 1 1.2459 1.2558 0 7499400 2932200 4567200 39582 2020 14910 15314 62113 62113 VYELLGLLGEVHPSEMINNAENLFR 25 0 1 Oxidation (M) _VYELLGLLGEVHPSEM(ox)INNAENLFR_ VYELLGLLGEVHPSEM(1)INNAENLFR VYELLGLLGEVHPSEM(60.75)INNAENLFR 0 1 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 962.1577 3 958.488253 2872.44293 61550.75 0.8041 0.00077072 0.48755 0.00046731 1.2917 0.001238 958.822963137724 962.158919888098 132.34 0.91618 132.34 131.81 132.72 0 188 57 8 0 0 0 2.841E-10 1 88454 60.747 60.747 1 0.61798 0.60862 0 13197000 8018800 5178600 39583 1665 14911 15315 62114 62114 1467 VYENYPTYDLTER 13 0 1 Unmodified _VYENYPTYDLTER_ 0 0 0 B4DNW3;H0Y993;Q6MZJ9;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK;DKFZp686A24118 Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.8872 2 831.885935 1661.75732 65487.81 0.83285 0.00069284 -0.01696 -1.4108E-05 0.81589 0.00067873 831.885956621153 836.889881494936 75.315 1.2852 75.315 74.667 75.952 0 807 108 11 0 0 0 4.2587E-09 4 44023 120.96 113.09 1 0.60968 0.72361 0 755600000 482840000 272760000 39584 1546;1018 14912 15316 62115;62116;62117;62118 62115 VYENYPTYDLTER 13 0 1 Unmodified _VYENYPTYDLTER_ 0 0 0 B4DNW3;H0Y993;Q6MZJ9;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK;DKFZp686A24118 Protein DEK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 832.3876 2 831.885935 1661.75732 65679.22 0.81092 0.00067459 -0.023227 -1.9323E-05 0.78769 0.00065527 831.885916801212 836.889873841697 74.24 1.2832 74.24 73.58 74.864 0 746 109 11 0 0 0 1.1843E-09 3 44481 124.1 116.54 1 0.62283 0.73004 0 740810000 453100000 287710000 39585 1546;1018 14912 15316 62119;62120;62121 62119 VYENYPTYDLTER 13 0 1 Unmodified _VYENYPTYDLTER_ 0 0 0 B4DNW3;H0Y993;Q6MZJ9;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK;DKFZp686A24118 Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 831.8863 2 831.885935 1661.75732 66984.54 0.51257 0.0004264 0.2039 0.00016962 0.71647 0.00059602 831.886309586761 836.890212427071 86.209 1.6199 86.209 85.809 87.429 0 785 101 11 0 0 0 8.9502E-06 6 47088 101.39 96.08 1 0.79875 0.69436 0 268900000 149940000 118960000 39586 1546;1018 14912 15316 62122;62123;62124;62125;62126;62127 62123 VYENYPTYDLTER 13 0 1 Unmodified _VYENYPTYDLTER_ 0 0 0 B4DNW3;H0Y993;Q6MZJ9;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK;DKFZp686A24118 Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 831.8867 2 831.885935 1661.75732 66762.05 0.65456 0.00054452 -0.074346 -6.1848E-05 0.58022 0.00048267 831.886135729489 836.889918867562 86.432 2.4744 86.432 85.838 88.313 -7.6294E-06 828 146 13 0 0 0 3.3179E-19 4 46440 147.72 138.03 1 0.78809 0.68844 0 236270000 131980000 104280000 39587 1546;1018 14912 15316 62128;62129;62130;62131 62129 VYENYPTYDLTER 13 0 1 Unmodified _VYENYPTYDLTER_ 0 0 0 B4DNW3;H0Y993;Q6MZJ9;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK;DKFZp686A24118 Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 832.3879 2 831.885935 1661.75732 67441.95 0.64089 0.00053315 -0.47763 -0.00039733 0.16326 0.00013582 832.387336113707 837.391097283898 87.62 0.89582 87.62 87.16 88.056 0 116 52 4 0 0 0 0.059694 1 47615 27.149 27.149 1 0.50111 0.44587 0 2358500 1424400 934140 39588 1546;1018 14912 15316 62132 62132 VYENYPTYDLTERK 14 1 1 Unmodified _VYENYPTYDLTERK_ 0 0 1 B4DNW3;H0Y993;Q6MZJ9;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK;DKFZp686A24118 Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.9594 3 597.624703 1789.85228 77929.27 0.41649 0.0002489 0.042646 2.5487E-05 0.45913 0.00027439 597.958950133577 603.966768186392 69.033 0.55512 69.033 68.77 69.325 0 162 38 6 0 0 0 0.053991 1 36111 9.0356 9.0356 1 0.96691 0.82098 0 8799600 4540300 4259300 39589 1546;1018 14913 15317 62133 62133 VYENYPTYDLTERK 14 1 1 Unmodified _VYENYPTYDLTERK_ 0 0 1 B4DNW3;H0Y993;Q6MZJ9;P35659;B4DFG0 B4DNW3;P35659 P35659 DEK;DKFZp686A24118 Protein DEK MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 597.9597 3 597.624703 1789.85228 78397.47 0.58405 0.00034904 0.29036 0.00017353 0.87441 0.00052257 597.958963719153 603.632504175941 69.604 0.59167 69.604 69.299 69.89 0 132 40 4 0 0 0 0.013086 2 35651 18.457 18.457 1 1.0131 0.85301 0 7887900 3534300 4353600 39590 1546;1018 14913 15317 62134;62135 62135 VYFFGSGQPEK 11 1 0 Unmodified _VYFFGSGQPEK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 633.8175 2 629.808771 1257.60299 75488.16 0.6608 0.00041618 0.24779 0.00015606 0.90859 0.00057224 629.808631714434 633.81578949636 71.845 1.4076 71.845 71.451 72.858 0 517 102 9 0 0 0 1.8777E-05 2 41905 105.4 97.176 1 0.84436 0.95446 0 144290000 79897000 64389000 39591 1942 14914 15318 62136;62137 62137 VYFFGSGQPEK 11 1 0 Unmodified _VYFFGSGQPEK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 633.8165 2 629.808771 1257.60299 76101.52 0.74566 0.00046962 0.021969 1.3836E-05 0.76763 0.00048346 629.80841098407 633.815687861709 70.57 1.1859 70.57 70.279 71.464 0 474 91 9 0 0 0 0.00031294 3 42047 87.913 79.332 1 0.82426 0.94826 0 175680000 98413000 77271000 39592 1942 14914 15318 62138;62139;62140 62139 VYFFGSGQPEK 11 1 0 Unmodified _VYFFGSGQPEK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 629.8089 2 629.808771 1257.60299 76478.13 0.50538 0.00031829 0.21521 0.00013554 0.72059 0.00045383 629.808752686868 633.815965623937 82.034 0.92528 82.034 81.521 82.446 0 317 53 10 0 0 0 0.00090896 2 44511 84.213 69.546 1 1.5049 1.2241 0 29997000 11138000 18859000 39593 1942 14914 15318 62141;62142 62142 VYFFGSGQPEK 11 1 0 Unmodified _VYFFGSGQPEK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.8164 2 629.808771 1257.60299 75659.59 0.49255 0.00031021 0.25454 0.00016031 0.74709 0.00047052 629.808842793041 633.815967326654 82.184 0.91574 82.184 81.812 82.728 0 307 54 8 0 0 0 0.0068025 2 43694 53.751 49.3 1 1.4601 1.2046 0 30417000 11759000 18658000 39594 1942 14914 15318 62143;62144 62143 VYFLPITPHYVTQVIR 16 0 1 Unmodified _VYFLPITPHYVTQVIR_ 0 0 0 Q53SY7;F8VPD4;P27708 Q53SY7 Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 649.7022 3 649.368128 1945.08255 78793.62 0.76743 0.00049835 -0.023411 -1.5202E-05 0.74402 0.00048315 649.702281802841 652.70445729798 127.59 0.48785 127.59 127.33 127.82 0 83 19 7 0 0 0 0.041664 1 75989 17.242 17.242 1 0.58668 0.50308 0 3337200 2122200 1215000 39595 1259 14915 15319 62145 62145 VYHLEEPK 8 1 0 Unmodified _VYHLEEPK_ 0 0 0 A0A0A8K8C0;Q9H6W3 A0A0A8K8C0 A0A0A8K8C0 URLC2;NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 511.7737 2 507.766374 1013.5182 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.597 1 28.597 28.097 29.097 0 0 0 0 0.034178 1 13551 60.895 37.372 1 39596 497 14916 15320 62146 62146 VYIVHGVQEDLR 12 0 1 Unmodified _VYIVHGVQEDLR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.2626 3 476.592898 1426.75686 87017.52 0.12195 5.8119E-05 0.18283 8.7138E-05 0.30478 0.00014526 476.5924224044 479.929084225162 59.4 0.63066 59.4 59.048 59.679 0 133 57 4 0 0 0 0.041985 1 34383 22.055 22.055 1 0.65701 0.6859 0 22462000 13114000 9347800 39597 120 14917 15321 62147 62147 VYIVHGVQEDLR 12 0 1 Unmodified _VYIVHGVQEDLR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 480.2633 3 476.592898 1426.75686 88528.45 -0.0077578 -3.6973E-06 0.63567 0.00030295 0.62791 0.00029926 476.592915981267 479.929225111833 69.885 0.55466 69.885 69.666 70.22 0 180 51 6 0 0 0 0.025354 1 36627 28.903 26.846 1 0.81035 0.69282 0 5853700 2807500 3046200 39598 120 14917 15321 62148 62148 VYIVHGVQEDLR 12 0 1 Unmodified _VYIVHGVQEDLR_ 0 0 0 B2RDZ9;A0A024R2P7;Q15024;B4DIU0 B2RDZ9 B2RDZ9 EXOSC7 Exosome complex component RRP42 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 479.929 3 476.592898 1426.75686 86601.28 0.15765 7.5137E-05 0.043398 2.0683E-05 0.20105 9.582E-05 476.59234731519 479.929042537172 70.159 0.57026 70.159 69.907 70.477 0 148 50 4 0 0 0 0.027768 2 36039 25.342 22.02 1 1.0475 0.87995 0 4834200 2180200 2654100 39599 120 14917 15321 62149;62150 62149 VYLILEYAPLGTVYR 15 0 1 Unmodified _VYLILEYAPLGTVYR_ 0 0 0 O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4 O14965 O14965 AURKA Aurora kinase A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 891.0011 2 885.495455 1768.97636 NaN NaN NaN 0.33547 0.00029706 NaN NaN NaN NaN 128.24 0.35521 128.24 128.07 128.43 0 0 0 0 6.8204E-06 1 83574 91.855 91.855 1 NaN NaN 0 4605300 0 4605300 39600 1369 14918 15322 62151 62151 VYLILEYAPLGTVYR 15 0 1 Unmodified _VYLILEYAPLGTVYR_ 0 0 0 O14965;B4DX16;A3KFJ0;B2R6Z3;Q5QPD4 O14965 O14965 AURKA Aurora kinase A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 890.5018 2 885.495455 1768.97636 NaN NaN NaN 1.0319 0.00091376 NaN NaN NaN NaN 127.85 0.20592 127.85 127.69 127.89 0 0 0 0 0.00033286 1 85360 74.944 47.615 1 NaN NaN 0 11731000 0 11731000 39601 1369 14918 15322 62152 62152 VYLQNEYK 8 1 0 Unmodified _VYLQNEYK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.7793 2 528.771657 1055.52876 79283.96 0.5582 0.00029516 -1.9296 -0.0010203 -1.3714 -0.00072517 529.269881911438 532.778542256904 36.188 0.46172 36.188 35.882 36.344 0 186 38 6 0 0 0 0.012693 1 18427 67.032 58.5 1 1.9125 1.9786 0 33072000 11083000 21989000 39602 1207 14919 15323 62153 62153 VYLQNEYK 8 1 0 Unmodified _VYLQNEYK_ 0 0 0 E5KNY5;P42704;B4DSR0;A0A0C4DG06;B8ZZ38;C9JCA9 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 532.7788 2 528.771657 1055.52876 NaN NaN NaN 1.1746 0.00062107 NaN NaN NaN NaN 42.584 0.67419 42.584 42.262 42.937 3.8147E-06 0 0 0 0.020574 1 19865 65.038 42.018 1 NaN NaN 0 1235500 0 1235500 39603 1207 14919 15323 62154 62154 VYNVTQHAVGIVVNK 15 1 0 Unmodified _VYNVTQHAVGIVVNK_ 0 0 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.3134 3 547.64214 1639.90459 81049.54 0.6162 0.00033746 -0.32798 -0.00017961 0.28822 0.00015784 547.642172115616 550.313414710103 67.531 1.4446 67.531 66.993 68.438 0 858 121 10 0 0 0 1.349E-06 3 38835 97.223 87.166 1 0.95117 1.1304 0 564560000 289720000 274840000 39604 1571 14920 15324 62155;62156;62157 62155 VYNVTQHAVGIVVNK 15 1 0 Unmodified _VYNVTQHAVGIVVNK_ 0 0 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.9604 2 820.959571 1639.90459 67542.06 0.69224 0.0005683 0.15596 0.00012803 0.8482 0.00069634 821.461098843356 824.966697626794 67.617 0.93358 67.617 67.133 68.066 0 478 79 8 0 0 0 3.1544E-47 2 38959 189.33 189.33 1 0.99314 1.1192 0 126840000 66217000 60621000 39605 1571 14920 15324 62158;62159 62159 VYNVTQHAVGIVVNK 15 1 0 Unmodified _VYNVTQHAVGIVVNK_ 0 0 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 824.9675 2 820.959571 1639.90459 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.06 1 68.06 67.56 68.56 0 0 0 0 0.033833 1 39420 41.684 28.483 1 39606 1571 14920 15324 62160 62160 VYNVTQHAVGIVVNK 15 1 0 Unmodified _VYNVTQHAVGIVVNK_ 0 0 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.6472 3 547.64214 1639.90459 81481.52 0.25742 0.00014097 0.14359 7.8636E-05 0.40101 0.00021961 547.64235182826 550.313611307025 65.713 1.5115 65.713 65.16 66.672 0 823 125 10 0 0 0 3.2977E-06 4 38595 92.457 92.457 1 0.9134 1.077 0 699400000 362450000 336950000 39607 1571 14920 15324 62161;62162;62163;62164 62162 VYNVTQHAVGIVVNK 15 1 0 Unmodified _VYNVTQHAVGIVVNK_ 0 0 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.9661 2 820.959571 1639.90459 67430.16 0.50222 0.00041231 0.18945 0.00015553 0.69167 0.00056783 821.46112823952 824.966825497845 65.714 0.83438 65.714 65.425 66.259 7.6294E-06 456 71 8 0 0 0 5.3717E-07 2 38636 117.86 117.86 1 0.91565 1.056 0 186170000 89220000 96951000 39608 1571 14920 15324 62165;62166 62165 VYNVTQHAVGIVVNK 15 1 0 Unmodified _VYNVTQHAVGIVVNK_ 0 0 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.9603 2 820.959571 1639.90459 67199.08 0.58074 0.00047677 0.066041 5.4217E-05 0.64678 0.00053098 820.959621105301 824.96671525505 77.071 0.89838 77.071 76.793 77.691 0 370 60 10 0 0 0 4.2358E-10 2 41110 120.84 120.84 1 0.82205 0.66984 0 31760000 17223000 14537000 39609 1571 14920 15324 62167;62168 62168 VYNVTQHAVGIVVNK 15 1 0 Unmodified _VYNVTQHAVGIVVNK_ 0 0 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.3138 3 547.64214 1639.90459 80627.09 0.37798 0.000207 -0.2942 -0.00016112 0.083776 4.5879E-05 547.642231547702 550.313531727438 77.05 1.8023 77.05 76.436 78.238 0 664 120 10 0 0 0 1.7058E-07 2 41109 101.36 101.36 1 0.77834 0.67095 0 98389000 55181000 43207000 39610 1571 14920 15324 62169;62170 62169 VYNVTQHAVGIVVNK 15 1 0 Unmodified _VYNVTQHAVGIVVNK_ 0 0 0 Q6IAX2;P46778;Q59GK9;G3V1B3;M0R181 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.314 3 547.64214 1639.90459 81041.77 0.48706 0.00026673 -0.21054 -0.0001153 0.27652 0.00015143 547.642141083277 550.313516013313 77.194 1.5512 77.194 76.862 78.413 -7.6294E-06 613 100 10 0 0 0 6.821E-05 2 40342 66.246 60.818 1 0.86085 0.73305 0 85896000 46329000 39567000 39611 1571 14920 15324 62171;62172 62171 VYNYNHLMPTR 11 0 1 Oxidation (M) _VYNYNHLM(ox)PTR_ VYNYNHLM(1)PTR VYNYNHLM(135.86)PTR 0 1 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.3472 2 712.342986 1422.67142 70108.71 0.66064 0.0004706 -0.27371 -0.00019498 0.38693 0.00027562 712.342448979241 717.347146446335 33.946 0.81184 33.946 33.472 34.284 0 341 63 8 0 0 0 6.5468E-11 1 16853 135.86 135.86 1 1.085 1.2329 0 110950000 53575000 57378000 39612 93 14921 15325 62173 62173 85 VYNYNHLMPTR 11 0 1 Oxidation (M) _VYNYNHLM(ox)PTR_ VYNYNHLM(1)PTR VYNYNHLM(58.67)PTR 0 1 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.2311 3 475.231083 1422.67142 85757.6 0.11649 5.5357E-05 -0.1482 -7.0429E-05 -0.031713 -1.5071E-05 475.231050196851 478.567114477489 33.935 0.92909 33.935 33.662 34.591 0 503 83 10 0 0 0 0.001032 2 16873 58.674 58.674 1 1.1925 1.3995 0 220640000 95666000 124980000 39613 93 14921 15325 62174;62175 62174 85 VYNYNHLMPTR 11 0 1 Oxidation (M) _VYNYNHLM(ox)PTR_ VYNYNHLM(1)PTR VYNYNHLM(115.78)PTR 0 1 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 712.844 2 712.342986 1422.67142 69481.76 0.39202 0.00027926 -0.35285 -0.00025135 0.039171 2.7903E-05 712.843869922994 717.347226782567 32.878 0.728 32.878 32.735 33.463 0 296 66 8 0 0 0 2.9264E-08 2 16359 115.78 115.78 1 1.0176 1.1613 0 143970000 56918000 87052000 39614 93 14921 15325 62176;62177 62177 85 VYNYNHLMPTR 11 0 1 Oxidation (M) _VYNYNHLM(ox)PTR_ VYNYNHLM(1)PTR VYNYNHLM(59.2)PTR 0 1 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.5643 3 475.231083 1422.67142 83859.84 -0.17668 -8.3965E-05 -0.036202 -1.7204E-05 -0.21288 -0.00010117 475.231142119528 478.567141479418 32.926 0.92662 32.926 32.677 33.604 0 458 82 10 0 0 0 0.00095834 2 16365 59.198 59.198 1 1.2459 1.4442 0 301710000 145570000 156140000 39615 93 14921 15325 62178;62179 62179 85 VYNYNHLMPTR 11 0 1 Oxidation (M) _VYNYNHLM(ox)PTR_ VYNYNHLM(1)PTR VYNYNHLM(64.55)PTR 0 1 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 478.5673 3 475.231083 1422.67142 86926.41 0.04306 2.0463E-05 -0.040105 -1.9059E-05 0.0029547 1.4042E-06 475.231057294803 478.567145177732 39.036 0.96279 39.036 38.772 39.735 0 375 77 9 0 0 0 0.00046202 1 17774 64.55 64.55 1 0.41464 0.34532 0 22317000 15370000 6947100 39616 93 14921 15325 62180 62180 85 VYNYNHLMPTR 11 0 1 Unmodified _VYNYNHLMPTR_ 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 473.2358 3 469.899445 1406.6765 88268.16 0.065955 3.0992E-05 -0.10904 -5.1238E-05 -0.043086 -2.0246E-05 469.899450644842 473.235511889497 62.722 0.55973 62.722 62.429 62.989 0 213 46 6 0 0 0 0.0011643 2 32221 59.198 59.198 1 0.88301 0.7595 0 7647600 3988200 3659400 39617 93 14921 15326 62181;62182 62182 VYNYNHLMPTR 11 0 1 Unmodified _VYNYNHLMPTR_ 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 469.8996 3 469.899445 1406.6765 89801.39 0.093377 4.3878E-05 -0.14808 -6.9582E-05 -0.054701 -2.5704E-05 469.899416496001 473.235558763561 63.075 0.53772 63.075 62.874 63.412 -3.8147E-06 196 47 6 0 0 0 0.016091 2 31686 34.386 34.386 1 0.86552 0.72122 0 6879700 4219000 2660700 39618 93 14921 15326 62183;62184 62183 VYPQAVYFPIR 11 0 1 Unmodified _VYPQAVYFPIR_ 0 0 0 F2Z2U4;Q59FH1;H0Y4W2;Q9Y4A5 F2Z2U4 F2Z2U4 TRRAP Transformation/transcription domain-associated protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 676.872 2 676.871705 1351.72886 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.92 1 103.92 103.42 104.42 7.6294E-06 0 0 0 0.031577 1 64157 48.283 36.236 1 39619 1253 14922 15327 62185 62185 VYQWDDPDPR 10 0 1 Unmodified _VYQWDDPDPR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 645.7917 2 645.791109 1289.56767 77551.46 0.76132 0.00049166 0.077486 5.004E-05 0.83881 0.0005417 645.790965685765 650.79531837699 57.778 0.44086 57.778 57.532 57.973 0 124 34 5 0 0 0 0.03809 2 32716 39.547 34.181 1 1.4129 1.4588 0 6179700 2570700 3609000 39620 587 14923 15328 62186;62187 62186 VYQWDDPDPR 10 0 1 Unmodified _VYQWDDPDPR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 650.796 2 645.791109 1289.56767 75746.16 0.83836 0.0005414 -0.054207 -3.5006E-05 0.78415 0.0005064 645.791211700879 650.795233872914 56.732 0.34081 56.732 56.59 56.931 0 76 25 4 0 0 0 0.0026988 3 32742 67.897 62.356 1 1.3101 1.3246 0 9732000 4166100 5565900 39621 587 14923 15328 62188;62189;62190 62189 VYSLFLDESR 10 0 1 Unmodified _VYSLFLDESR_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 614.8141 2 614.814053 1227.61355 80959.46 0.37642 0.00023143 0.36351 0.00022349 0.73993 0.00045492 614.814490928971 619.818065344507 91.528 0.61753 91.528 91.169 91.786 0 200 54 5 0 0 0 1.2241E-05 2 56629 103.55 103.55 1 0.75694 0.80911 0 24877000 14718000 10159000 39622 2120 14924 15329 62191;62192 62192 VYSTALSSFLTK 12 1 0 Unmodified _VYSTALSSFLTK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.8594 2 658.85846 1315.70237 74188.35 0.95358 0.00062827 0.087043 5.7349E-05 1.0406 0.00068562 658.858530837083 662.865632554569 102.08 1.0865 102.08 101.74 102.83 7.6294E-06 452 89 9 0 0 0 0.00019799 3 62737 90.05 90.05 1 0.87555 0.99027 0 85795000 45418000 40377000 39623 1997 14925 15330 62193;62194;62195 62195 VYSTALSSFLTK 12 1 0 Unmodified _VYSTALSSFLTK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 658.8587 2 658.85846 1315.70237 75660.13 0.764 0.00050337 -0.19691 -0.00012973 0.56709 0.00037363 658.858459324651 662.865428631346 101.41 0.99567 101.41 101.02 102.02 -7.6294E-06 496 79 9 0 0 0 1.3822E-12 2 63671 128.81 128.81 1 0.87236 0.98235 0 69663000 35538000 34124000 39624 1997 14925 15330 62196;62197 62197 VYSTALSSFLTK 12 1 0 Unmodified _VYSTALSSFLTK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.8592 2 658.85846 1315.70237 75751.64 0.93497 0.00061602 0.30053 0.00019801 1.2355 0.00081402 658.858525270191 662.86566254331 114.62 0.86818 114.62 114.37 115.24 0 189 39 8 0 0 0 0.00044103 2 66943 79.659 79.659 1 0.94313 0.76678 0 29264000 15187000 14076000 39625 1997 14925 15330 62198;62199 62199 VYSTALSSFLTK 12 1 0 Unmodified _VYSTALSSFLTK_ 0 0 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 658.8593 2 658.85846 1315.70237 75933.95 0.72608 0.00047839 0.21572 0.00014213 0.9418 0.00062051 658.858497674429 662.865589771813 114.46 0.84248 114.46 114.17 115.02 0 181 36 9 0 0 0 0.00052344 2 65878 69.721 69.721 1 0.95309 0.76872 0 23229000 12022000 11207000 39626 1997 14925 15330 62200;62201 62201 VYSTTSYK 8 1 0 Unmodified _VYSTTSYK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.7438 2 474.737283 947.460012 88759.8 0.12604 5.9835E-05 -0.0055261 -2.6234E-06 0.12051 5.7212E-05 474.737154453397 478.744244193794 21.247 0.32808 21.247 21.114 21.442 0 42 14 5 0 0 0 0.0023621 1 7580 100.45 81.72 1 1.0413 1.022 0 22946000 9842100 13104000 39627 1936 14926 15331 62202 62202 VYTLSVSGDR 10 0 1 Unmodified _VYTLSVSGDR_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.7899 2 548.785296 1095.55604 79109.3 0.40243 0.00022085 0.46939 0.00025759 0.87182 0.00047844 548.785561851544 553.789545370051 52.389 0.96145 52.389 51.841 52.802 0 299 72 5 0 0 0 0.00017611 2 28924 94.85 77.923 1 0.97749 1.0711 0 53171000 27150000 26020000 39628 600 14927 15332 62203;62204 62204 VYTLSVSGDR 10 0 1 Unmodified _VYTLSVSGDR_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.7915 2 548.785296 1095.55604 79673.16 0.48124 0.0002641 0.63592 0.00034898 1.1172 0.00061308 548.785472636129 553.789349358987 51.068 0.76767 51.068 50.734 51.502 0 261 59 7 0 0 0 7.8785E-05 2 28847 98.033 81.493 1 0.98704 1.148 0 60098000 29925000 30173000 39629 600 14927 15332 62205;62206 62206 VYTLSVSGDR 10 0 1 Unmodified _VYTLSVSGDR_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.7894 2 548.785296 1095.55604 81546.79 0.34245 0.00018793 -0.33967 -0.0001864 0.0027779 1.5245E-06 548.785288271019 553.789315619475 60.299 0.64971 60.299 59.909 60.558 0 166 47 4 0 0 0 0.010146 1 30694 53.751 44.537 1 1.0522 0.89828 0 5697600 2902300 2795300 39630 600 14927 15332 62207 62207 VYTLSVSGDR 10 0 1 Unmodified _VYTLSVSGDR_ 0 0 0 J3QT28;A0A140VJF3;O43684;B4DDM6 J3QT28 J3QT28 BUB3 Mitotic checkpoint protein BUB3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 548.7861 2 548.785296 1095.55604 82126.06 0.43025 0.00023612 0.02305 1.2649E-05 0.4533 0.00024877 548.785468994323 553.789437886356 60.767 0.53307 60.767 60.444 60.977 3.8147E-06 172 43 5 0 0 0 0.011471 2 30370 51.949 43.086 1 1.1115 0.92433 0 6069900 2859000 3210900 39631 600 14927 15332 62208;62209 62209 VYVGNLGNNGNK 12 1 0 Unmodified _VYVGNLGNNGNK_ 0 0 0 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.8271 2 624.820201 1247.62585 74607.7 0.7816 0.00048836 0.086137 5.382E-05 0.86773 0.00054218 624.820078320568 628.827151256325 35.618 0.92345 35.618 35.092 36.015 0 253 86 4 0 0 0 8.6309E-19 1 17938 149.65 129.32 1 1.2959 1.4582 0 72352000 28350000 44001000 39632 841 14928 15333 62210 62210 VYVGNLGNNGNK 12 1 0 Unmodified _VYVGNLGNNGNK_ 0 0 0 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 628.8289 2 624.820201 1247.62585 76206.62 0.74616 0.00046622 -0.065996 -4.1236E-05 0.68017 0.00042498 624.819970237748 628.827153627476 34.839 0.49844 34.839 34.55 35.049 0 176 42 6 0 0 0 3.197E-13 3 17574 135.83 120.17 1 1.3594 1.5188 0 90648000 38133000 52514000 39633 841 14928 15333 62211;62212;62213 62212 VYVGNLGNNGNK 12 1 0 Unmodified _VYVGNLGNNGNK_ 0 0 0 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 628.8271 2 624.820201 1247.62585 75044.57 0.39611 0.0002475 0.013652 8.53E-06 0.40976 0.00025603 624.819952983811 628.827850452874 40.542 0.7562 40.542 40.283 41.039 0 234 61 7 0 0 0 0.0027257 2 18664 57.859 46.369 1 0.69178 0.55169 0 9534800 5625900 3908900 39634 841 14928 15333 62214;62215 62215 VYVGNLGNNGNK 12 1 0 Unmodified _VYVGNLGNNGNK_ 0 0 0 B2R6F3;P84103;A0A087X2D0 B2R6F3 B2R6F3 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.8202 2 624.820201 1247.62585 74968.94 0.30662 0.00019158 -0.21551 -0.00013465 0.09111 5.6927E-05 624.819923133461 628.82749249382 40.615 0.5407 40.615 40.38 40.921 0 233 42 7 0 0 0 0.00021968 2 18160 82.75 67.088 1 0.794 0.6475 0 7759600 4363600 3396100 39635 841 14928 15333 62216;62217 62217 VYVGNLGTGAGK 12 1 0 Unmodified _VYVGNLGTGAGK_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 568.3097 2 568.308938 1134.60332 NaN NaN NaN 0.46817 0.00026606 NaN NaN NaN NaN 45.759 1.2735 45.759 45.379 46.653 0 0 0 0 2.8697E-28 1 24656 147.4 90.858 1 NaN NaN 0 169990000 169990000 0 39636 1772;1918 14929 15334 62218 62218 VYVGNLGTGAGK 12 1 0 Unmodified _VYVGNLGTGAGK_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.3095 2 568.308938 1134.60332 NaN NaN NaN 0.6755 0.00038389 NaN NaN NaN NaN 44.85 0.94607 44.85 44.534 45.48 -3.8147E-06 0 0 0 6.2536E-09 1 24388 116.52 73.271 1 NaN NaN 0 228580000 228580000 0 39637 1772;1918 14929 15334 62219 62219 VYVGNLGTGAGK 12 1 0 Unmodified _VYVGNLGTGAGK_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 568.3097 2 568.308938 1134.60332 79621.45 0.38804 0.00022053 0.57703 0.00032793 0.96507 0.00054846 568.308964459251 572.316629250475 52.676 0.99491 52.676 52.362 53.357 0 456 78 8 0 0 0 0.0046189 2 25971 67.704 64.591 1 0.89865 0.72544 0 22661000 11865000 10796000 39638 1772;1918 14929 15334 62220;62221 62220 VYVGNLGTGAGK 12 1 0 Unmodified _VYVGNLGTGAGK_ 0 0 0 Q16629;A0A0B4J1Z1;B4DEK2;C9JAB2;Q8NB80 Q16629;Q8NB80 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 568.3091 2 568.308938 1134.60332 79250.93 0.33475 0.00019024 0.42088 0.00023919 0.75563 0.00042943 568.308935759862 572.316416421096 53.031 0.95102 53.031 52.725 53.676 0 393 68 8 0 0 0 0.003407 2 25586 67.726 64.747 1 0.93076 0.75379 0 24184000 12363000 11821000 39639 1772;1918 14929 15334 62222;62223 62222 VYVIGSFVDK 10 1 0 Unmodified _VYVIGSFVDK_ 0 0 0 Q7L0Y3 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.8107 2 563.810782 1125.60701 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.678 1 89.678 89.178 90.178 0 0 0 0 0.045382 1 54131 45.161 18.559 1 39640 1871 14930 15335 62224 62224 VYVIGSFVDK 10 1 0 Unmodified _VYVIGSFVDK_ 0 0 0 Q7L0Y3 Q7L0Y3 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 567.8182 2 563.810782 1125.60701 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.366 1 88.366 87.866 88.866 0 0 0 0 0.00045959 1 54504 72.643 55.257 1 39641 1871 14930 15335 62225 62225 VYWEVEVER 9 0 1 Unmodified _VYWEVEVER_ 0 0 0 A0A024RCP3;Q12899 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 604.8005 2 604.800946 1207.58734 NaN NaN NaN -1.0748 -0.00065004 NaN NaN NaN NaN 81.607 0.68237 81.607 81.204 81.887 0 0 0 0 0.008522 1 48433 68.016 50.631 1 NaN NaN 0 12408000 12408000 0 39642 365 14931 15336 62226 62226 VYWEVEVER 9 0 1 Unmodified _VYWEVEVER_ 0 0 0 A0A024RCP3;Q12899 A0A024RCP3 A0A024RCP3 TRIM26 Tripartite motif-containing protein 26 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.8012 2 604.800946 1207.58734 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.154 1 80.154 79.654 80.654 0 0 0 0 0.015145 1 48811 58.676 38.89 1 39643 365 14931 15336 62227 62227 VYWSTTDAR 9 0 1 Unmodified _VYWSTTDAR_ 0 0 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.7687 2 549.764363 1097.51417 82684.48 0.21872 0.00012025 0.53689 0.00029516 0.75561 0.00041541 549.764803407838 554.768615314763 50.964 0.49749 50.964 50.661 51.158 0 124 31 6 0 0 0 0.049868 1 25020 38.086 28.498 1 2.0244 1.7534 0 1953700 583220 1370500 39644 1680 14932 15337 62228 62228 VYYEHLEK 8 1 0 Unmodified _VYYEHLEK_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 360.8504 3 360.850197 1079.52876 NaN NaN NaN 0.10227 3.6904E-05 NaN NaN NaN NaN 26.366 0.37042 26.366 26.185 26.555 0 0 0 0 0.040561 1 11766 28.495 22.289 1 NaN NaN 0 8454700 8454700 0 39645 1412 14933 15338 62229 62229 WAGGGFLSTVGDLLK 15 1 0 Unmodified _WAGGGFLSTVGDLLK_ 0 0 0 P83111 P83111 P83111 LACTB Serine beta-lactamase-like protein LACTB, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.9089 2 760.909016 1519.80348 NaN NaN NaN 0.59223 0.00045063 NaN NaN NaN NaN 131.02 0.29854 131.02 130.93 131.22 0 0 0 0 0.050916 1 87626 46.592 28.28 1 NaN NaN 0 2263600 2263600 0 39646 1671 14934 15339 62230 62230 WAIELSGPGGGSR 13 0 1 Unmodified _WAIELSGPGGGSR_ 0 0 0 S4R329;H0YK61;H0YNK0;H0YNK8;A0A0S2Z598;A0A024R9N3;Q5J8M3;H0YMH5 S4R329 S4R329 EMC4;TMEM85 ER membrane protein complex subunit 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.8281 2 643.828026 1285.6415 74312.42 0.90637 0.00058355 -0.61776 -0.00039773 0.28861 0.00018582 643.827313862445 648.831359154502 84.113 0.36095 84.113 83.934 84.294 0 66 28 4 0 0 0 0.00028037 1 51624 66.595 23.513 1 0.64679 0.65395 0 9731400 4779900 4951600 39647 283 14935 15340 62231 62231 WAQPDTAPLPVPANIR 16 0 1 Unmodified _WAQPDTAPLPVPANIR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 873.9724 2 873.470303 1744.92605 65001.49 0.60963 0.00053249 -0.68942 -0.00060219 -0.079792 -6.9696E-05 873.469250995245 878.473694251004 105.55 0.84972 105.55 105 105.85 0 238 65 7 0 0 0 0.00015266 3 65410 69.01 69.01 1 0.64055 0.6543 0 26633000 16125000 10508000 39648 1421 14936 15341 62232;62233;62234 62233 WAQPDTAPLPVPANIR 16 0 1 Unmodified _WAQPDTAPLPVPANIR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.9724 2 873.470303 1744.92605 65767.73 0.71207 0.00062197 -0.40645 -0.00035503 0.30562 0.00026695 873.469805854763 878.474022463595 104.93 0.60591 104.93 104.57 105.18 0 220 48 7 0 0 0 2.6584E-07 3 66533 99.283 99.283 1 0.64356 0.69501 0 26585000 17073000 9512600 39649 1421 14936 15341 62235;62236;62237 62235 WAQPDTAPLPVPANIR 16 0 1 Unmodified _WAQPDTAPLPVPANIR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 878.4746 2 873.470303 1744.92605 64284.88 0.34194 0.00029867 0.011096 9.6917E-06 0.35304 0.00030837 873.971278125993 878.474629833347 116.91 0.56527 116.91 116.66 117.23 0 136 21 10 0 0 0 5.0078E-12 2 68710 115.29 115.29 1 1.1949 1.0156 0 34177000 15888000 18289000 39650 1421 14936 15341 62238;62239 62239 WAQPDTAPLPVPANIR 16 0 1 Unmodified _WAQPDTAPLPVPANIR_ 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 878.4755 2 873.470303 1744.92605 64560.39 0.44132 0.00038548 0.0054499 4.7603E-06 0.44677 0.00039024 873.971085238064 878.474775287246 116.66 0.61952 116.66 116.43 117.05 0 176 26 10 0 0 0 0.00015358 2 67634 68.355 68.355 1 1.2455 1.0865 0 27844000 11289000 16555000 39651 1421 14936 15341 62240;62241 62241 WCEYGLTFTEK 11 1 0 Unmodified _WCEYGLTFTEK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5;Q5JSD2;Q5JSD1;A2A3S1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.3315 2 717.323928 1432.6333 72477.23 0.98134 0.00070394 -0.60822 -0.00043629 0.37312 0.00026765 717.323632181783 721.330717499318 91.471 0.85722 91.471 91.01 91.868 0 335 69 8 0 0 0 0.00047879 2 55169 75.294 70.995 1 2.0027 2.172 0 45042000 16041000 29002000 39652 28 14937 15342 62242;62243 62242 WCEYGLTFTEK 11 1 0 Unmodified _WCEYGLTFTEK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5;Q5JSD2;Q5JSD1;A2A3S1 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.3317 2 717.323928 1432.6333 73163.73 1.2055 0.00086475 -0.65461 -0.00046957 0.55092 0.00039519 717.323509858643 721.330660210425 90.583 1.006 90.583 90.134 91.14 0 352 83 6 0 0 0 0.00038057 2 55799 83 78.701 1 2.0444 2.1763 0 36379000 12068000 24311000 39653 28 14937 15342 62244;62245 62245 WDAWNALGSLPK 12 1 0 Unmodified _WDAWNALGSLPK_ 0 0 0 F8WAW4;Q9NYD2;B4DLL3;F1LLU7;C9JB63;Q59E94;Q6IBN4;Q53HG3;Q53GC8;A0A0C4DGA2;A0A024QZU5;O75521;F8W6J1 F8WAW4 F8WAW4 ECI2;HCA64;PECI Enoyl-CoA delta isomerase 2, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 683.3574 2 679.348594 1356.68264 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.31 1 115.31 114.81 115.81 0 0 0 0 0.0068724 1 75212 61.353 49.117 1 39654 29 14938 15343 62246 62246 WDMSAENAR 9 0 1 Oxidation (M) _WDM(ox)SAENAR_ WDM(1)SAENAR WDM(66.62)SAENAR 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.2338 2 548.22983 1094.44511 NaN NaN NaN 0.31061 0.00017028 NaN NaN NaN NaN 20.597 0.27008 20.597 20.493 20.763 0 0 0 0 0.0031546 1 7028 66.621 56.207 1 NaN NaN 0 11138000 0 11138000 39655 2103 14939 15344 62247 62247 1934 WDNLIYYALGGHK 13 1 0 Unmodified _WDNLIYYALGGHK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.2648 3 517.264781 1548.77251 86249.37 0.36279 0.00018766 0.044411 2.2972E-05 0.4072 0.00021063 517.599103763047 519.936202854277 109.87 0.84854 109.87 109.4 110.24 -7.6294E-06 204 62 5 0 0 0 0.0097495 2 68643 26.124 18.58 1 0.85362 0.8899 0 14970000 7617200 7352800 39656 1756 14940 15345 62248;62249 62248 WDNLIYYALGGHK 13 1 0 Unmodified _WDNLIYYALGGHK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.2646 3 517.264781 1548.77251 86225.62 0.48723 0.00025203 -0.10859 -5.6168E-05 0.37865 0.00019586 517.59901207798 519.936081393115 108.78 0.80174 108.78 108.34 109.14 0 241 56 6 0 0 0 0.017146 2 69492 20.427 16.359 1 0.85075 0.85064 0 15353000 6602700 8749800 39657 1756 14940 15345 62250;62251 62250 WDNLIYYALGGHK 13 1 0 Unmodified _WDNLIYYALGGHK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.2702 3 517.264781 1548.77251 84043.7 0.67428 0.00034878 -0.16801 -8.6903E-05 0.50628 0.00026188 517.598902260636 519.936185382753 119.63 0.49438 119.63 119.38 119.87 0 89 22 7 0 0 0 0.010628 2 70846 25.718 20.827 1 1.2249 0.97911 0 8972300 4080200 4892100 39658 1756 14940 15345 62252;62253 62252 WDNLIYYALGGHK 13 1 0 Unmodified _WDNLIYYALGGHK_ 0 0 0 Q15269;A0A0B4J2E5 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 517.2653 3 517.264781 1548.77251 85646.95 0.34208 0.00017695 0.12803 6.6226E-05 0.47011 0.00024317 517.59901785385 519.936348860936 119.35 0.5096 119.35 119.17 119.68 0 84 23 7 0 0 0 0.0031249 3 69745 33.685 33.685 1 1.1503 0.94514 0 9619800 4162500 5457300 39659 1756 14940 15345 62254;62255;62256 62256 WDVSTTK 7 1 0 Unmodified _WDVSTTK_ 0 0 0 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 422.7183 2 418.711068 835.407583 NaN NaN NaN 0.42033 0.000176 NaN NaN NaN NaN 30.308 0.26412 30.308 30.144 30.408 0 0 0 0 0.032834 1 14829 66.799 46.917 1 NaN NaN 0 16712000 0 16712000 39660 1454 14941 15346 62257 62257 WEGLVYAPPGK 11 1 0 Unmodified _WEGLVYAPPGK_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 608.8223 2 608.821681 1215.62881 78261.23 0.56094 0.00034151 0.93677 0.00057033 1.4977 0.00091184 608.821936996613 612.829266613619 83.085 0.54265 83.085 82.848 83.391 0 203 47 6 0 0 0 0.0078014 2 49645 51.949 51.949 1 0.95494 0.9873 0 17190000 7894600 9295800 39661 2128 14942 15347 62258;62259 62258 WEGNYLFPR 9 0 1 Unmodified _WEGNYLFPR_ 0 0 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 591.2907 2 591.290548 1180.56654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.541 1 91.541 91.041 92.041 0 0 0 0 0.0007141 1 55429 100.39 82.355 1 39662 2007 14943 15348 62260 62260 WELLQQMNVGTRPINLEPIFQGYIDSLKR 29 1 2 Oxidation (M) _WELLQQM(ox)NVGTRPINLEPIFQGYIDSLKR_ WELLQQM(1)NVGTRPINLEPIFQGYIDSLKR WELLQQM(65.58)NVGTRPINLEPIFQGYIDSLKR 0 1 2 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 869.7125 4 869.460513 3473.81294 NaN NaN NaN 0.04224 3.6726E-05 NaN NaN NaN NaN 132.24 0.25903 132.24 132.13 132.39 0 0 0 0 5.357E-12 1 86399 65.581 58.3 1 NaN NaN 0 8304600 8304600 0 + 39663 1166 14944 15349 62261 62261 889 WELLQQVDTSTR 12 0 1 Unmodified _WELLQQVDTSTR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 738.3786 2 738.37808 1474.74161 NaN NaN NaN -0.55956 -0.00041317 NaN NaN NaN NaN 91.084 0.60106 91.084 90.874 91.475 0 0 0 0 0.001298 1 55092 79.659 63.435 1 NaN NaN 0 5345200 5345200 0 + 39664 1308;1309 14945 15350 62262 62262 WELLQQVDTSTR 12 0 1 Unmodified _WELLQQVDTSTR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.3784 2 738.37808 1474.74161 NaN NaN NaN -0.56096 -0.0004142 NaN NaN NaN NaN 90.241 0.59181 90.241 89.984 90.576 0 0 0 0 4.3358E-05 1 55696 96.015 76.744 1 NaN NaN 0 7824900 7824900 0 + 39665 1308;1309 14945 15350 62263 62263 WENIATILEAK 11 1 0 Unmodified _WENIATILEAK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 644.3519 2 644.350803 1286.68705 75970.97 1.1195 0.00072134 -0.64101 -0.00041303 0.47848 0.00030831 644.350700615509 648.356565078794 110.84 0.46496 110.84 110.62 111.09 7.6294E-06 122 29 6 0 0 0 2.7555E-05 1 69752 101.97 101.97 1 0.81491 0.8255 0 27642000 15072000 12570000 39666 1803 14946 15351 62264 62264 WENIATILEAK 11 1 0 Unmodified _WENIATILEAK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.3512 2 644.350803 1286.68705 77113.84 0.78568 0.00050626 -0.68767 -0.0004431 0.098014 6.3155E-05 644.35055157629 648.35620168361 110.16 0.48827 110.16 109.94 110.43 0 145 30 7 0 0 0 4.3775E-05 1 70849 99.568 83.111 1 0.89286 0.9082 0 30366000 16193000 14173000 39667 1803 14946 15351 62265 62265 WENIATILEAK 11 1 0 Unmodified _WENIATILEAK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 644.3514 2 644.350803 1286.68705 76727.55 0.88768 0.00057198 0.25783 0.00016613 1.1455 0.00073811 644.350753415341 648.358099863206 122.25 0.52335 122.25 121.99 122.52 7.6294E-06 106 25 7 0 0 0 0.00021304 2 72919 92.239 88.352 1 1.6228 1.299 0 8637100 3326500 5310600 39668 1803 14946 15351 62266;62267 62267 WENIATILEAK 11 1 0 Unmodified _WENIATILEAK_ 0 0 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 648.3591 2 644.350803 1286.68705 77244.06 0.92052 0.00059314 0.22036 0.00014199 1.1409 0.00073513 644.350949055515 648.358120207718 122.06 0.59772 122.06 121.72 122.32 0 105 28 6 0 0 0 0.0017288 2 71845 65.278 65.278 1 1.852 1.5067 0 7049400 2952600 4096900 39669 1803 14946 15351 62268;62269 62269 WEQELNAK 8 1 0 Unmodified _WEQELNAK_ 0 0 0 O43463;B4DMP6 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 513.2606 2 509.253631 1016.49271 85635.92 0.43641 0.00022224 -0.41699 -0.00021236 0.019419 9.8894E-06 509.253390315595 513.260547372534 37.919 0.71446 37.919 37.494 38.208 0 186 58 5 0 0 0 0.012238 1 17113 68.081 54.305 1 1.6654 1.3681 0 2406500 968860 1437700 39670 1385 14947 15352 62270 62270 WEVCLTMSEK 10 1 0 Oxidation (M) _WEVCLTM(ox)SEK_ WEVCLTM(1)SEK WEVCLTM(47.6)SEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 649.7918 2 649.791406 1297.56826 74929.99 0.88696 0.00057634 -0.2151 -0.00013977 0.67185 0.00043656 649.791431772077 653.798535419807 71.662 0.67226 71.662 71.498 72.17 0 264 55 7 0 0 0 0.0087523 2 41808 47.603 44.608 1 0.93993 0.99187 0 30916000 16180000 14736000 39671 1471 14948 15353 62271;62272 62271 1214 WEVCLTMSEK 10 1 0 Oxidation (M) _WEVCLTM(ox)SEK_ WEVCLTM(1)SEK WEVCLTM(47.23)SEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.7995 2 649.791406 1297.56826 74276.88 0.79529 0.00051677 -0.1312 -8.5254E-05 0.66408 0.00043152 649.791248740735 653.798613466837 70.404 0.69443 70.404 70.201 70.895 0 252 56 7 0 0 0 0.009204 1 42058 47.228 43.734 1 0.96356 0.97891 0 30036000 13619000 16418000 39672 1471 14948 15353 62273 62273 1214 WEVCLTMSEK 10 1 0 Oxidation (M) _WEVCLTM(ox)SEK_ WEVCLTM(1)SEK WEVCLTM(42.34)SEK 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 649.7916 2 649.791406 1297.56826 75393.09 0.69802 0.00045357 -0.41348 -0.00026867 0.28454 0.00018489 649.791213038 653.798472393909 81.642 0.46156 81.642 81.378 81.839 0 143 26 8 0 0 0 0.015095 2 44288 42.336 42.336 1 0.8107 0.65138 0 7854400 4524300 3330100 39673 1471 14948 15353 62274;62275 62275 1214 WFEENASQSTVK 12 1 0 Unmodified _WFEENASQSTVK_ 0 0 0 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.3433 2 713.335881 1424.65721 72768.99 0.74358 0.00053042 -0.25638 -0.00018289 0.4872 0.00034754 713.335678757269 717.342169610094 52.015 0.53215 52.015 51.773 52.305 0 165 41 6 0 0 0 0.00086033 1 28791 64.73 64.73 1 1.2784 1.3019 0 17961000 7839800 10121000 39674 1049 14949 15354 62276 62276 WFEENASQSTVK 12 1 0 Unmodified _WFEENASQSTVK_ 0 0 0 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 B4DY09 B4DY09 ILF2 Interleukin enhancer-binding factor 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.8397 2 713.335881 1424.65721 NaN NaN NaN 0.7698 0.00054913 NaN NaN NaN NaN 50.564 0.27797 50.564 50.422 50.7 0 0 0 0 0.0012593 2 28528 80.102 68.508 1 NaN NaN 0 7005800 7005800 0 39675 1049 14949 15354 62277;62278 62277 WFLTCINQPQFR 12 0 1 Unmodified _WFLTCINQPQFR_ 0 0 0 Q53YD7;P26641 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 810.4059 2 805.400835 1608.78712 70584.48 0.94071 0.00075765 -0.23599 -0.00019006 0.70472 0.00056758 805.400107239583 810.405137249118 112.31 0.4395 112.31 112.1 112.54 -7.6294E-06 96 30 4 0 0 0 0.00082149 1 70878 65.305 65.305 1 1.9856 2.0201 0 7226000 2372400 4853700 39676 1522 14950 15355 62279 62279 WFLTCINQPQFR 12 0 1 Unmodified _WFLTCINQPQFR_ 0 0 0 Q53YD7;P26641 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.4062 2 805.400835 1608.78712 68491.99 0.85226 0.00068641 0.28959 0.00023324 1.1418 0.00091965 805.399799916657 810.405127356386 111.73 0.45193 111.73 111.43 111.89 0 104 29 6 0 0 0 0.00019051 1 72024 76.827 70.594 1 1.6687 1.6618 0 8898300 4218600 4679700 39677 1522 14950 15355 62280 62280 WFNGQPIHAELSPVTDFR 18 0 1 Unmodified _WFNGQPIHAELSPVTDFR_ 0 0 0 P0DN76;Q01081;Q7Z780;B5BU08 P0DN76 P0DN76 U2AF1 Splicing factor U2AF 35 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 709.0223 3 705.353318 2113.03812 72414.11 0.74635 0.00052644 -0.64089 -0.00045205 0.10547 7.4391E-05 705.353113590802 708.688542369246 105.88 0.90532 105.88 105.52 106.43 0 264 66 6 0 0 0 1.9111E-05 3 65711 54.368 54.368 1 1.3113 1.3468 0 14293000 6420700 7872700 39678 1463 14951 15356 62281;62282;62283 62283 WFNGQPIHAELSPVTDFR 18 0 1 Unmodified _WFNGQPIHAELSPVTDFR_ 0 0 0 P0DN76;Q01081;Q7Z780;B5BU08 P0DN76 P0DN76 U2AF1 Splicing factor U2AF 35 kDa subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.0232 3 705.353318 2113.03812 72179.98 0.81414 0.00057426 -0.61817 -0.00043603 0.19598 0.00013823 705.687743944389 708.688775114407 104.8 0.82212 104.8 104.45 105.27 7.6294E-06 224 63 6 0 0 0 6.479E-05 1 66397 47.916 47.916 1 1.4968 1.6219 0 27554000 8732100 18822000 39679 1463 14951 15356 62284 62284 WFNGQPIHAELSPVTDFR 18 0 1 Unmodified _WFNGQPIHAELSPVTDFR_ 0 0 0 P0DN76;Q01081;Q7Z780;B5BU08 P0DN76 P0DN76 U2AF1 Splicing factor U2AF 35 kDa subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.6882 3 705.353318 2113.03812 73106.13 0.76962 0.00054286 -0.87346 -0.0006161 -0.10383 -7.324E-05 705.3520717431 709.022962824712 116.16 0.45255 116.16 115.98 116.43 -7.6294E-06 95 19 8 0 0 0 0.00010951 1 68230 46.131 46.131 1 0.44799 0.37913 0 4958600 3290100 1668600 39680 1463 14951 15356 62285 62285 WFNGQPIHAELSPVTDFR 18 0 1 Unmodified _WFNGQPIHAELSPVTDFR_ 0 0 0 P0DN76;Q01081;Q7Z780;B5BU08 P0DN76 P0DN76 U2AF1 Splicing factor U2AF 35 kDa subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 709.0251 3 705.353318 2113.03812 73710.21 0.85824 0.00060536 -0.72188 -0.00050918 0.13636 9.6181E-05 705.353035810279 709.023015174839 116.01 0.60134 116.01 115.77 116.37 0 97 29 6 0 0 0 0.03891 1 67160 15.984 12.746 1 0.44433 0.39052 0 4148800 2785600 1363200 39681 1463 14951 15356 62286 62286 WFWLLPVK 8 1 0 Unmodified _WFWLLPVK_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7;A0A024R3R7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.8188 2 544.818213 1087.62187 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.87 1 130.87 130.37 131.37 0 0 0 0 0.037693 1 87531 59.205 48.791 1 39682 897 14952 15357 62287 62287 WGDAGAEYVVESTGVFTTMEK 21 1 0 Oxidation (M) _WGDAGAEYVVESTGVFTTM(ox)EK_ WGDAGAEYVVESTGVFTTM(1)EK WGDAGAEYVVESTGVFTTM(58.08)EK 0 1 0 V9HVZ4;P04406;Q2TSD0;Q0QET7;E7EUT5;B4DRV9 V9HVZ4 V9HVZ4 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1151.5315 2 1147.02009 2292.02563 NaN NaN NaN 0.11845 0.00013587 NaN NaN NaN NaN 110.94 0.41956 110.94 110.81 111.22 0 0 0 0 2.0903E-06 3 69729 58.079 53 1 NaN NaN 0 7592300 0 7592300 39683 1442 14953 15358 62288;62289;62290 62288 1149 WGDIEFPPPFGR 12 0 1 Unmodified _WGDIEFPPPFGR_ 0 0 0 A0A024R1Y2;A0A024R1T9;Q4LE36;P53396 A0A024R1Y2 A0A024R1Y2 ACLY;ACLY variant protein ATP-citrate synthase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 709.3491 2 709.348594 1416.68264 NaN NaN NaN 0.046792 3.3192E-05 NaN NaN NaN NaN 120.16 0.46735 120.16 119.94 120.41 0 0 0 0 0.007134 1 79356 59.067 39.077 1 NaN NaN 0 2970200 2970200 0 39684 89 14954 15359 62291 62291 WGEPPVAVPAPQQADGNPDVPPPRPLQGR 29 0 2 Unmodified _WGEPPVAVPAPQQADGNPDVPPPRPLQGR_ 0 0 1 Q12873;H7C2H0 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1015.524 3 1014.85633 3041.54715 59838.36 0.36032 0.00036567 -0.43904 -0.00044556 -0.078716 -7.9886E-05 1015.18993215528 1021.86265333825 94.76 0.41414 94.76 94.553 94.967 -7.6294E-06 91 33 6 0 0 0 0.012835 2 58938 21.462 21.462 1 0.39447 0.41292 0 13643000 10176000 3466800 39685 1701 14955 15360 62292;62293 62293 WGEPPVAVPAPQQADGNPDVPPPRPLQGR 29 0 2 Unmodified _WGEPPVAVPAPQQADGNPDVPPPRPLQGR_ 0 0 1 Q12873;H7C2H0 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1015.1906 3 1014.85633 3041.54715 61593.57 0.48781 0.00049506 0.087719 8.9022E-05 0.57553 0.00058408 1015.1903594496 1021.86264597724 108.35 0.48688 108.35 108.13 108.62 -7.6294E-06 120 23 8 0 0 0 0.012873 1 62213 21.453 21.453 1 1.323 1.1555 0 4574600 1842700 2732000 39686 1701 14955 15360 62294 62294 WGEPPVAVPAPQQADGNPDVPPPRPLQGR 29 0 2 Unmodified _WGEPPVAVPAPQQADGNPDVPPPRPLQGR_ 0 0 1 Q12873;H7C2H0 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1014.8561 3 1014.85633 3041.54715 60307.9 0.30993 0.00031453 -0.095662 -9.7083E-05 0.21426 0.00021745 1015.19068900262 1021.86292622402 108.26 0.48438 108.26 108.04 108.53 0 128 22 10 0 0 0 0.034108 2 61219 16.447 16.447 1 1.6088 1.4564 0 4708100 1606100 3101900 39687 1701 14955 15360 62295;62296 62296 WGQPPSPTPVPRPPDADPNTPSPK 24 1 1 Unmodified _WGQPPSPTPVPRPPDADPNTPSPK_ 0 0 1 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 846.0941 3 845.759072 2534.25539 NaN NaN NaN 0.019563 1.6545E-05 NaN NaN NaN NaN 74.617 0.28584 74.617 74.4 74.686 0 0 0 0 0.0030417 1 43752 37.896 30.184 1 NaN NaN 0 8122600 8122600 0 39688 515 14956 15361 62297 62297 WGTPVPLEGFEDK 13 1 0 Unmodified _WGTPVPLEGFEDK_ 0 0 0 A8K492;P56192;B4DF61;B4E0E9 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8721 2 737.864274 1473.714 72212.24 0.8461 0.00062431 0.0091955 6.785E-06 0.85529 0.00063109 737.864270105126 742.372580596691 106.46 0.55945 106.46 106.21 106.77 7.6294E-06 99 40 4 0 0 0 0.0066862 1 66157 45.915 39.382 1 2.6021 2.5531 0 8873500 3347100 5526400 39689 732 14957 15362 62298 62298 WGVPIEK 7 1 0 Unmodified _WGVPIEK_ 0 0 0 P11387;B9EG90;Q9BVT2 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 418.7414 2 414.734346 827.454139 92709.67 0.24762 0.0001027 -0.14326 -5.9416E-05 0.10435 4.328E-05 414.734163848045 418.741241973406 66.086 0.73378 66.086 65.566 66.3 0 318 67 6 0 0 0 0.037624 1 37869 60.76 39.058 1 0.89769 0.98869 0 55368000 29102000 26266000 39690 1470 14958 15363 62299 62299 WISDYADSVPDPEALR 16 0 1 Unmodified _WISDYADSVPDPEALR_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.4421 2 917.436323 1832.85809 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.26 1 106.26 105.76 106.76 -7.6294E-06 0 0 0 0.00042585 1 65962 78.763 55.387 1 39691 2133 14959 15364 62300 62300 WISDYADSVPDPEALR 16 0 1 Unmodified _WISDYADSVPDPEALR_ 0 0 0 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 922.4419 2 917.436323 1832.85809 NaN NaN NaN 0.13142 0.00012057 NaN NaN NaN NaN 105.75 0.41874 105.75 105.56 105.98 7.6294E-06 0 0 0 0.00067812 1 67195 66.393 40.35 1 NaN NaN 0 9491500 0 9491500 39692 2133 14959 15364 62301 62301 WISLTNFISEATVEK 15 1 0 Unmodified _WISLTNFISEATVEK_ 0 0 0 A2A2Q9;Q9Y312 A2A2Q9 A2A2Q9 AAR2 Protein AAR2 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.4658 2 869.456527 1736.8985 NaN NaN NaN 1.1859 0.0010311 NaN NaN NaN NaN 127.16 0.31107 127.16 126.99 127.3 7.6294E-06 0 0 0 0.0436 1 84871 38.021 21.389 1 NaN NaN 0 3724000 0 3724000 39693 647 14960 15365 62302 62302 WITEEQPNSATNLR 14 0 1 Unmodified _WITEEQPNSATNLR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 829.9124 2 829.910276 1657.806 68004.18 0.55073 0.00045705 0.089555 7.4323E-05 0.64028 0.00053138 829.910371266677 835.415895728177 66.14 0.58511 66.14 65.88 66.465 0 201 53 5 0 0 0 6.4854E-21 2 38169 139.31 139.31 1 1.1516 1.1907 0 23492000 13036000 10456000 39694 1945 14961 15366 62303;62304 62304 WITEEQPNSATNLR 14 0 1 Unmodified _WITEEQPNSATNLR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 829.91 2 829.910276 1657.806 67628.71 0.48251 0.00040044 0.078546 6.5186E-05 0.56106 0.00046563 829.910656756033 834.914731923831 64.917 0.53938 64.917 64.712 65.251 0 157 43 5 0 0 0 1.3691E-21 3 38340 148.19 134.42 1 1.2262 1.2291 0 18112000 8198400 9913900 39695 1945 14961 15366 62305;62306;62307 62307 WITEEQPNSATNLR 14 0 1 Unmodified _WITEEQPNSATNLR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.9145 2 829.910276 1657.806 66471.21 0.57294 0.00047549 0.12954 0.00010751 0.70248 0.000583 829.910507802066 834.914590024932 75.955 0.94853 75.955 75.622 76.571 0 282 68 8 0 0 0 2.5341E-06 1 40374 105.2 105.2 1 2.55 2.0871 0 13293000 3908600 9384000 39696 1945 14961 15366 62308 62308 WITEEQPNSATNLR 14 0 1 Unmodified _WITEEQPNSATNLR_ 0 0 0 Q8WYP5;Q96M44 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 834.9153 2 829.910276 1657.806 66777.45 0.53212 0.00044161 0.085615 7.1053E-05 0.61773 0.00051266 829.910361585553 834.914508262621 76.314 0.82311 76.314 76.021 76.844 0 254 56 8 0 0 0 3.0489E-21 3 39832 145.28 145.28 1 2.3513 1.9015 0 10618000 3567400 7050900 39697 1945 14961 15366 62309;62310;62311 62311 WKDSDEADLVLAK 13 2 0 Unmodified _WKDSDEADLVLAK_ 0 0 1 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.2563 3 497.255951 1488.74602 85968.08 0.20446 0.00010167 0.20132 0.00010011 0.40579 0.00020178 497.256134216171 502.598779152564 66.659 0.66895 66.659 66.388 67.057 0 222 56 5 0 0 0 0.018969 1 39417 30.998 26.107 1 0.95068 1.0909 0 21816000 11246000 10570000 39698 662 14962 15367 62312 62312 WKDSDEADLVLAK 13 2 0 Unmodified _WKDSDEADLVLAK_ 0 0 1 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 753.8964 2 745.380288 1488.74602 69579.25 0.59939 0.00044677 -0.11221 -8.3636E-05 0.48718 0.00036314 745.380060271042 753.394264701346 77.745 0.89333 77.745 77.421 78.315 0 328 58 8 0 0 0 0.017478 1 41537 50.484 50.484 1 1.3447 1.1468 0 19326000 8089100 11236000 39699 662 14962 15367 62313 62313 WKDSDEADLVLAK 13 2 0 Unmodified _WKDSDEADLVLAK_ 0 0 1 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.5988 3 497.255951 1488.74602 86030.7 0.15995 7.9538E-05 0.21388 0.00010635 0.37383 0.00018589 497.256007264251 502.598799725351 77.732 1.2747 77.732 77.421 78.696 0 398 85 9 0 0 0 0.00071848 2 41547 45.79 45.79 1 1.2778 1.09 0 18346000 8446200 9899400 39700 662 14962 15367 62314;62315 62314 WKDSDEADLVLAK 13 2 0 Unmodified _WKDSDEADLVLAK_ 0 0 1 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.2563 3 497.255951 1488.74602 84964.47 0.21443 0.00010663 0.31117 0.00015473 0.5256 0.00026136 497.256059579142 502.598856984124 77.933 0.98465 77.933 77.639 78.624 0 339 62 9 0 0 0 0.015021 2 40866 21.86 20.872 1 1.2285 1.0396 0 14205000 6278100 7927100 39701 662 14962 15367 62316;62317 62317 WKDTDEADLVLAK 13 2 0 Unmodified _WKDTDEADLVLAK_ 0 0 1 V9HWG0;P45973 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 752.3887 2 752.388113 1502.76167 69071.78 0.52096 0.00039196 0.22602 0.00017006 0.74698 0.00056202 752.388422071122 760.403016269409 71.481 0.55913 71.481 71.184 71.743 0 186 50 5 0 0 0 0.01792 1 41816 50.149 50.149 1 0.53468 0.63836 0 18612000 11254000 7357400 39702 1568 14963 15368 62318 62318 WKDTDEADLVLAK 13 2 0 Unmodified _WKDTDEADLVLAK_ 0 0 1 V9HWG0;P45973 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.271 3 501.927834 1502.76167 84651.36 0.22788 0.00011438 0.29696 0.00014905 0.52484 0.00026343 501.92797200298 507.270550198398 69.694 0.65335 69.694 69.375 70.028 0 271 53 7 0 0 0 0.020658 2 41450 26.359 26.359 1 0.53278 0.61515 0 30844000 18789000 12055000 39703 1568 14963 15368 62319;62320 62320 WKDTDEADLVLAK 13 2 0 Unmodified _WKDTDEADLVLAK_ 0 0 1 V9HWG0;P45973 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 507.2707 3 501.927834 1502.76167 83797.85 0.26022 0.00013061 -0.10734 -5.3879E-05 0.15287 7.6731E-05 501.927825507367 507.270458150939 81.049 1.0778 81.049 80.683 81.761 0 397 66 9 0 0 0 0.013242 2 43773 24.929 24.929 1 1.0114 0.8633 0 16117000 8050100 8067200 39704 1568 14963 15368 62321;62322 62322 WKDTDEADLVLAK 13 2 0 Unmodified _WKDTDEADLVLAK_ 0 0 1 V9HWG0;P45973 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 752.3884 2 752.388113 1502.76167 69613.73 0.59411 0.000447 -0.40976 -0.0003083 0.18436 0.00013871 752.38769842841 760.402074090619 81.019 1.0102 81.019 80.696 81.706 0 343 62 8 0 0 0 0.0013691 1 43839 67.879 67.879 1 0.89294 0.76196 0 17156000 8737400 8418900 39705 1568 14963 15368 62323 62323 WKDTDEADLVLAK 13 2 0 Unmodified _WKDTDEADLVLAK_ 0 0 1 V9HWG0;P45973 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 507.2704 3 501.927834 1502.76167 84356.24 0.35214 0.00017675 -0.14921 -7.4895E-05 0.20292 0.00010185 501.927807955107 507.270411649824 81.14 1.0163 81.14 80.843 81.859 0 349 58 9 0 0 0 0.025374 1 43070 19.754 19.754 1 1.0039 0.84913 0 13144000 6908000 6236200 39706 1568 14963 15368 62324 62324 WLAPDGLIFPDR 12 0 1 Unmodified _WLAPDGLIFPDR_ 0 0 0 E9PKG1;Q5U8W9;H7C2I1;Q99873;E9PNR9;E9PQ98;E9PIX6;H0YDE4;B4DJ87 E9PKG1 E9PKG1 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.3726 2 700.372069 1398.72959 72853.41 0.98324 0.00068864 -0.03731 -2.6131E-05 0.94593 0.00066251 700.371729962549 705.877713415742 119.25 0.48193 119.25 118.96 119.44 0 142 30 6 0 0 0 5.6214E-08 2 76665 112.75 98.979 1 1.1757 1.1685 0 8449300 3103400 5345900 39707 1243 14964 15369 62325;62326 62326 WLAPDGLIFPDR 12 0 1 Unmodified _WLAPDGLIFPDR_ 0 0 0 E9PKG1;Q5U8W9;H7C2I1;Q99873;E9PNR9;E9PQ98;E9PIX6;H0YDE4;B4DJ87 E9PKG1 E9PKG1 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.3763 2 700.372069 1398.72959 75659.73 0.78449 0.00054944 -0.22051 -0.00015444 0.56398 0.000395 700.371842340856 705.375959082698 118.7 0.46419 118.7 118.47 118.94 -7.6294E-06 118 28 6 0 0 0 0.00020961 2 78194 80.706 80.706 1 1.248 1.2534 0 11182000 4108000 7074400 39708 1243 14964 15369 62327;62328 62328 WLAPDGLIFPDR 12 0 1 Unmodified _WLAPDGLIFPDR_ 0 0 0 E9PKG1;Q5U8W9;H7C2I1;Q99873;E9PNR9;E9PQ98;E9PIX6;H0YDE4;B4DJ87 E9PKG1 E9PKG1 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.376 2 700.372069 1398.72959 72551.49 0.66526 0.00046593 -0.6641 -0.00046512 0.001161 8.1316E-07 700.873650226536 705.877315187457 130.96 0.47733 130.96 130.73 131.2 0 63 20 5 0 0 0 0.037481 1 79390 34.692 24.461 1 0.9912 0.87666 0 1491600 893880 597770 39709 1243 14964 15369 62329 62329 WLAPDGLIFPDR 12 0 1 Unmodified _WLAPDGLIFPDR_ 0 0 0 E9PKG1;Q5U8W9;H7C2I1;Q99873;E9PNR9;E9PQ98;E9PIX6;H0YDE4;B4DJ87 E9PKG1 E9PKG1 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.3784 2 700.372069 1398.72959 74821.37 0.91451 0.0006405 -0.41573 -0.00029117 0.49878 0.00034933 700.371198838312 705.376083668666 130.74 0.48145 130.74 130.44 130.92 0 59 19 4 0 0 0 0.031629 1 78363 35.652 35.652 1 1.0779 0.93473 0 1603200 775870 827310 39710 1243 14964 15369 62330 62330 WLEASEEER 9 0 1 Unmodified _WLEASEEER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.7686 2 574.76456 1147.51457 NaN NaN NaN -0.041451 -2.3825E-05 NaN NaN NaN NaN 40.664 0.40862 40.664 40.437 40.846 0 0 0 0 0.0077518 1 21227 69.598 51.563 1 NaN NaN 0 23307000 0 23307000 39711 1726 14965 15370 62331 62331 WLEASEEER 9 0 1 Unmodified _WLEASEEER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.7645 2 574.76456 1147.51457 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.545 1 40.545 40.045 41.045 0 0 0 0 0.0030519 1 21226 76.827 60.624 1 39712 1726 14965 15370 62332 62332 WLEASEEER 9 0 1 Unmodified _WLEASEEER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.7689 2 574.76456 1147.51457 NaN NaN NaN 0.03558 2.045E-05 NaN NaN NaN NaN 39.554 0.48126 39.554 39.398 39.88 0 0 0 0 0.00092767 1 20961 88.948 70.912 1 NaN NaN 0 44712000 0 44712000 39713 1726 14965 15370 62333 62333 WLEASEEER 9 0 1 Unmodified _WLEASEEER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.7643 2 574.76456 1147.51457 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.505 1 39.505 39.005 40.005 0 0 0 0 0.0031384 1 20941 75.378 50.455 1 39714 1726 14965 15370 62334 62334 WLEASEEER 9 0 1 Unmodified _WLEASEEER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 579.769 2 574.76456 1147.51457 79763.39 0.29237 0.00016804 0.32108 0.00018454 0.61344 0.00035259 574.764600709265 579.768837617771 46.432 0.76107 46.432 46.197 46.958 0 233 48 8 0 0 0 0.013268 2 22313 56.729 46.694 1 1.1571 0.96451 0 22698000 10549000 12149000 39715 1726 14965 15370 62335;62336 62335 WLEASEEER 9 0 1 Unmodified _WLEASEEER_ 0 0 0 Q14137;B2RDN4;A8K3R2;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 579.7689 2 574.76456 1147.51457 80015.93 0.14135 8.1241E-05 0.45825 0.00026339 0.5996 0.00034463 574.764805200666 579.768904688535 46.458 1.0122 46.458 46.216 47.228 0 280 66 8 0 0 0 0.0018185 1 21799 80.455 53.853 1 1.1593 0.95639 0 14406000 6707300 7698800 39716 1726 14965 15370 62337 62337 WLEVEIAPDIR 11 0 1 Unmodified _WLEVEIAPDIR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.8674 2 670.864077 1339.7136 NaN NaN NaN 0.090598 6.0779E-05 NaN NaN NaN NaN 112.48 0.63955 112.48 112.16 112.8 7.6294E-06 0 0 0 0.0025968 1 70845 73.067 53.28 1 NaN NaN 0 7918900 0 7918900 39717 1741 14966 15371 62338 62338 WLEVEIAPDIR 11 0 1 Unmodified _WLEVEIAPDIR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 676.3699 2 670.864077 1339.7136 74156.67 0.92424 0.00062004 0.18475 0.00012394 1.109 0.00074398 671.365859149209 675.86813669767 111.9 0.55724 111.9 111.6 112.16 0 193 40 6 0 0 0 0.0036568 1 72122 59.426 39.639 1 0.90177 0.90401 0 18937000 9457400 9479200 39718 1741 14966 15371 62339 62339 WLEVEIAPDIR 11 0 1 Unmodified _WLEVEIAPDIR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 675.8685 2 670.864077 1339.7136 75760.16 0.83514 0.00056026 -0.14963 -0.00010038 0.68551 0.00045989 670.864030735918 675.867820243799 123.55 0.89261 123.55 123.23 124.12 7.6294E-06 143 36 7 0 0 0 2.7331E-05 2 73864 102.06 102.06 1 1.2565 1.0697 0 5430000 2186600 3243500 39719 1741 14966 15371 62340;62341 62341 WLEVEIAPDIR 11 0 1 Unmodified _WLEVEIAPDIR_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 676.3694 2 670.864077 1339.7136 76917.54 0.80869 0.00054252 -0.12683 -8.5083E-05 0.68186 0.00045744 670.863886930653 675.867953363885 123.41 0.77786 123.41 123.16 123.93 0 109 32 5 0 0 0 0.00033438 2 72828 86.624 66.838 1 1.151 0.98533 0 3296100 1426100 1870000 39720 1741 14966 15371 62342;62343 62343 WLGDLILSK 9 1 0 Unmodified _WLGDLILSK_ 0 0 0 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.8163 2 522.808042 1043.60153 84715.89 0.5197 0.0002717 -0.028371 -1.4833E-05 0.49133 0.00025687 522.807767309393 526.815337250143 112.5 0.47235 112.5 112.25 112.73 -7.6294E-06 119 34 4 0 0 0 0.016855 2 70950 53.493 31.184 1 0.97026 0.96386 0 9565200 4630700 4934500 39721 1407 14967 15372 62344;62345 62345 WLGDLILSK 9 1 0 Unmodified _WLGDLILSK_ 0 0 0 O75530;B4DVW7 O75530 O75530 EED Polycomb protein EED MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.8157 2 522.808042 1043.60153 85065.99 0.71992 0.00037638 0.029282 1.5309E-05 0.7492 0.00039169 522.807719424546 526.8153274916 111.87 0.48213 111.87 111.6 112.09 0 151 34 6 0 0 0 0.024033 2 72170 48.423 30.021 1 0.93832 0.98329 0 10769000 5521800 5246800 39722 1407 14967 15372 62346;62347 62346 WLGNLLAR 8 0 1 Unmodified _WLGNLLAR_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 471.7799 2 471.779619 941.544686 89785.06 0.68524 0.00032328 -0.052356 -2.47E-05 0.63288 0.00029858 471.779460401469 476.783686451736 95.571 0.79285 95.571 95.108 95.901 -7.6294E-06 212 66 5 0 0 0 0.011674 1 59416 69.383 30.362 1 0.78948 0.782 0 15580000 8524100 7056000 39723 1854 14968 15373 62348 62348 WLNDLLCLDCLNITR 15 0 1 Unmodified _WLNDLLCLDCLNITR_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 960.4808 2 959.979321 1917.94409 62059.73 0.68956 0.00066196 -0.24049 -0.00023087 0.44906 0.00043109 960.479430696639 964.983717566846 133.12 0.4724 133.12 132.88 133.35 0 101 16 9 0 0 0 2.2135E-15 1 87025 132.79 132.79 1 0.73695 0.75388 0 34404000 19088000 15316000 39724 2023;1687 14969 15374 62349 62349 WNTDNTLGTEITVEDQLAR 19 0 1 Unmodified _WNTDNTLGTEITVEDQLAR_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1089.0305 2 1088.52947 2175.04439 57903.08 0.21937 0.00023879 0.34479 0.00037531 0.56416 0.0006141 1089.03139868848 1094.03529961342 106.31 0.66499 106.31 106.08 106.74 -7.6294E-06 360 47 10 0 0 0 6.8369E-06 2 65926 77.776 77.776 1 1.4309 1.6045 0 91459000 40276000 51183000 39725 639 14970 15375 62350;62351 62351 WNTDNTLGTEITVEDQLAR 19 0 1 Unmodified _WNTDNTLGTEITVEDQLAR_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1088.5275 2 1088.52947 2175.04439 57519.74 0.33699 0.00036683 0.31592 0.00034389 0.65291 0.00071071 1089.03128238757 1094.03546897137 105.82 0.79023 105.82 105.48 106.27 -7.6294E-06 381 59 10 0 0 0 7.6701E-06 2 67117 76.588 71.605 1 1.3623 1.5507 0 111160000 47604000 63555000 39726 639 14970 15375 62352;62353 62352 WNTDNTLGTEITVEDQLAR 19 0 1 Unmodified _WNTDNTLGTEITVEDQLAR_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1088.5298 2 1088.52947 2175.04439 57620.71 0.32935 0.00035851 -0.042842 -4.6635E-05 0.28651 0.00031187 1089.03127354091 1094.03513558996 117.78 0.73065 117.78 117.55 118.28 -7.6294E-06 199 30 10 0 0 0 3.5844E-05 2 69378 53.001 53.001 1 2.1562 1.8424 0 38587000 12269000 26319000 39727 639 14970 15375 62354;62355 62354 WNTDNTLGTEITVEDQLAR 19 0 1 Unmodified _WNTDNTLGTEITVEDQLAR_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1089.0299 2 1088.52947 2175.04439 57221.3 0.0037555 4.088E-06 -0.096142 -0.00010465 -0.092386 -0.00010057 1089.0315974045 1094.0353170364 117.71 0.57785 117.71 117.42 118 -7.6294E-06 221 27 11 0 0 0 3.243E-05 2 68372 54.898 52.189 1 2.3501 2.0499 0 37935000 13102000 24833000 39728 639 14970 15375 62356;62357 62356 WNVEDVYEFIR 11 0 1 Unmodified _WNVEDVYEFIR_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0 B3KPJ4 B3KPJ4 PHC2 Polyhomeotic-like protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.3607 2 735.356616 1468.69868 NaN NaN NaN 0.29413 0.00021629 NaN NaN NaN NaN 123.85 0.44507 123.85 123.65 124.09 0 0 0 0 0.0027751 1 80306 71.349 63.703 1 NaN NaN 0 2240600 0 2240600 39729 479 14971 15376 62358 62358 WNVEDVYEFIR 11 0 1 Unmodified _WNVEDVYEFIR_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0 B3KPJ4 B3KPJ4 PHC2 Polyhomeotic-like protein 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 740.3612 2 735.356616 1468.69868 NaN NaN NaN 0.22415 0.00016483 NaN NaN NaN NaN 123.42 0.55556 123.42 123.04 123.6 0 0 0 0 0.0067134 1 81910 63.283 56.9 1 NaN NaN 0 3558500 0 3558500 39730 479 14971 15376 62359 62359 WNVSRPSLLADSK 13 1 1 Unmodified _WNVSRPSLLADSK_ 0 0 1 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.6077 3 491.600052 1471.77833 NaN NaN NaN 0.95366 0.00046882 NaN NaN NaN NaN 68.815 0.45673 68.815 68.501 68.958 0 0 0 0 0.044371 1 40806 40.751 25.165 1 NaN NaN 0 11989000 0 11989000 39731 1854 14972 15377 62360 62360 WNVSRPSLLADSK 13 1 1 Unmodified _WNVSRPSLLADSK_ 0 0 1 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.6077 3 491.600052 1471.77833 87193.03 0.096107 4.7246E-05 0.29054 0.00014283 0.38665 0.00019008 491.600225506619 497.607657282462 80.011 0.4646 80.011 79.765 80.229 0 87 27 4 0 0 0 0.043827 1 43175 17.8 10.43 1 0.92583 0.81956 0 2251700 1079500 1172200 39732 1854 14972 15377 62361 62361 WPPEDEISKPEVPEDVDLDLK 21 2 0 Unmodified _WPPEDEISKPEVPEDVDLDLK_ 0 0 1 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 822.7463 3 817.40396 2449.19005 67719.59 0.80521 0.00065818 0.14489 0.00011843 0.9501 0.00077661 817.405078832451 823.081494316497 107.59 0.51895 107.59 107.38 107.9 -7.6294E-06 135 37 6 0 0 0 0.00039541 2 67048 35.389 31.795 1 1.96 2.3236 0 16316000 7527400 8788400 39733 1010 14973 15378 62362;62363 62362 WPPEDEISKPEVPEDVDLDLK 21 2 0 Unmodified _WPPEDEISKPEVPEDVDLDLK_ 0 0 1 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.7479 3 817.40396 2449.19005 67857.27 0.8898 0.00072732 -0.056692 -4.6341E-05 0.8331 0.00068098 817.737944369115 823.081193149969 107.14 0.55578 107.14 106.85 107.4 0 148 37 7 0 0 0 0.002153 1 68245 27.61 27.61 1 1.7046 1.9466 0 13930000 4153000 9777400 39734 1010 14973 15378 62364 62364 WQAVLAQTDVR 11 0 1 Unmodified _WQAVLAQTDVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.8516 2 643.846219 1285.67788 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.104 1 74.104 73.604 74.604 0 0 0 0 0.00076435 1 43467 71.349 44.095 1 39735 1754 14974 15379 62365 62365 WQAVLAQTDVR 11 0 1 Unmodified _WQAVLAQTDVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 648.8495 2 643.846219 1285.67788 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.215 1 74.215 73.715 74.715 -7.6294E-06 0 0 0 1.7175E-05 1 43537 91.584 51.539 1 39736 1754 14974 15379 62366 62366 WQAVLAQTDVR 11 0 1 Unmodified _WQAVLAQTDVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 648.8496 2 643.846219 1285.67788 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.029 1 73.029 72.529 73.529 0 0 0 0 2.2417E-05 1 43841 90.108 58.174 1 39737 1754 14974 15379 62367 62367 WQAVLAQTDVR 11 0 1 Unmodified _WQAVLAQTDVR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.8511 2 643.846219 1285.67788 NaN NaN NaN 0.21169 0.00013629 NaN NaN NaN NaN 84.611 0.30997 84.611 84.48 84.79 7.6294E-06 0 0 0 0.051684 1 46172 43.77 29.472 1 NaN NaN 0 842490 0 842490 39738 1754 14974 15379 62368 62368 WQDIQNDPR 9 0 1 Unmodified _WQDIQNDPR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;Q6ZU36 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 586.2781 2 586.278169 1170.54179 79127.04 0.52883 0.00031004 0.19252 0.00011287 0.72135 0.00042291 586.277630258441 591.282343779636 38.108 0.63754 38.108 37.717 38.354 0 286 52 7 0 0 0 0.0033411 2 17184 72.042 63.193 1 1.6727 1.3692 0 16364000 5888500 10476000 39739 515 14975 15380 62369;62370 62370 WQDIQNDPR 9 0 1 Unmodified _WQDIQNDPR_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63;Q6ZU36 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.2778 2 586.278169 1170.54179 79296.05 0.29319 0.00017189 0.66542 0.00039012 0.95861 0.00056201 586.277918275638 591.282430071754 38.308 0.85765 38.308 37.751 38.608 0 290 68 7 0 0 0 0.0061814 2 16849 64.841 61.486 1 1.6365 1.3269 0 11944000 4605900 7338400 39740 515 14975 15380 62371;62372 62372 WQFLTLR 7 0 1 Unmodified _WQFLTLR_ 0 0 0 B4E266;B4DER1;B2RCM2;Q9P2J5 B4E266 B4E266 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 487.2782 2 482.27417 962.533787 90223.43 0.20125 9.7059E-05 0.34215 0.00016501 0.5434 0.00026207 482.274239562655 487.278329884235 106.79 0.77718 106.79 106.34 107.11 -7.6294E-06 158 58 4 0 0 0 0.030326 1 66251 68.915 49.278 1 1.6533 1.7151 0 5699800 1896800 3803000 39741 883 14976 15381 62373 62373 WQGELQR 7 0 1 Unmodified _WQGELQR_ 0 0 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 458.7358 2 458.735409 915.456264 NaN NaN NaN 0.12374 5.6762E-05 NaN NaN NaN NaN 28.282 0.18863 28.282 28.172 28.361 0 0 0 0 0.048672 1 13486 58.981 41.42 1 NaN NaN 0 9875400 9875400 0 39742 1699 14977 15382 62374 62374 WQHDLFDSGFGGGAGVETGGK 21 1 0 Unmodified _WQHDLFDSGFGGGAGVETGGK_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 710.6651 3 707.992337 2120.95518 72730.3 0.48891 0.00034614 0.32141 0.00022756 0.81032 0.0005737 708.326889811726 710.663571152203 100.53 0.70937 100.53 100.25 100.96 7.6294E-06 310 53 9 0 0 0 0.042695 1 56797 12.196 12.196 1 0.56878 0.44197 0 15129000 9429300 5700000 39743 1229 14978 15383 62375 62375 WQHDLFDSGFGGGAGVETGGK 21 1 0 Unmodified _WQHDLFDSGFGGGAGVETGGK_ 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 707.9931 3 707.992337 2120.95518 72847.12 0.4728 0.00033474 0.28016 0.00019835 0.75296 0.00053309 708.326944020083 710.998110899598 100.37 0.69939 100.37 100.15 100.85 0 251 53 7 0 0 0 0.01961 2 55832 19.044 19.044 1 0.56125 0.45062 0 14432000 8351300 6080600 39744 1229 14978 15383 62376;62377 62376 WQLSVATEQPELEGPR 16 0 1 Unmodified _WQLSVATEQPELEGPR_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 920.4656 2 920.465415 1838.91628 NaN NaN NaN 0.83309 0.00076683 NaN NaN NaN NaN 99.722 0.68958 99.722 99.412 100.1 -7.6294E-06 0 0 0 5.1704E-05 2 60918 78.324 72.479 1 NaN NaN 0 37935000 37935000 0 39745 2065 14979 15384 62378;62379 62379 WQLSVATEQPELEGPR 16 0 1 Unmodified _WQLSVATEQPELEGPR_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 920.9703 2 920.465415 1838.91628 NaN NaN NaN 0.83249 0.00076628 NaN NaN NaN NaN 99.09 0.74197 99.09 98.724 99.466 0 0 0 0 6.9547E-07 1 61887 90.926 76.668 1 NaN NaN 0 53494000 53494000 0 39746 2065 14979 15384 62380 62380 WQLSVATEQPELEGPR 16 0 1 Unmodified _WQLSVATEQPELEGPR_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 925.4693 2 920.465415 1838.91628 63067.74 0.8599 0.00079151 -0.14423 -0.00013275 0.71568 0.00065876 920.465243860837 925.46926407788 112.31 0.68708 112.31 111.94 112.63 0 267 39 10 0 0 0 0.0014822 2 65095 60.157 54.433 1 1.1716 1.0093 0 62759000 30077000 32682000 39747 2065 14979 15384 62381;62382 62382 WQLSVATEQPELEGPR 16 0 1 Unmodified _WQLSVATEQPELEGPR_ 0 0 0 Q9NR30;Q8NI92 Q9NR30 Q9NR30 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 925.4701 2 920.465415 1838.91628 63580.59 0.491 0.00045194 0.08438 7.7669E-05 0.57538 0.00052961 920.465465833923 925.469499092697 112.14 0.77733 112.14 111.8 112.58 7.6294E-06 277 42 10 0 0 0 0.0001733 2 64054 81.565 75.842 1 1.1471 1.0009 0 63766000 29965000 33800000 39748 2065 14979 15384 62383;62384 62384 WQNNLLPSR 9 0 1 Unmodified _WQNNLLPSR_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3;H3BVC7 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 564.3013 2 564.301447 1126.58834 80844.05 0.52723 0.00029752 -0.0082628 -4.6627E-06 0.51897 0.00029285 564.301383031156 569.30554319571 68.907 1.0946 68.907 68.296 69.39 7.6294E-06 559 96 8 0 0 0 1.4296E-11 3 40148 151.97 143.11 1 0.59094 0.69525 0 232220000 140560000 91662000 39749 831 14980 15385 62385;62386;62387 62387 WQNNLLPSR 9 0 1 Unmodified _WQNNLLPSR_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3;H3BVC7 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.3017 2 564.301447 1126.58834 81034.24 0.51052 0.00028809 -0.041637 -2.3496E-05 0.46888 0.00026459 564.301378401105 569.305550795574 67.59 1.0717 67.59 67.116 68.188 0 434 89 7 0 0 0 4.4487E-06 1 39881 133.23 124.02 1 0.5762 0.66838 0 319330000 192110000 127220000 39750 831 14980 15385 62388 62388 WQNNLLPSR 9 0 1 Unmodified _WQNNLLPSR_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3;H3BVC7 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.3059 2 564.301447 1126.58834 80796.5 0.55038 0.00031058 -0.073588 -4.1526E-05 0.4768 0.00026906 564.301419841261 569.305557070676 78.5 1.5776 78.5 78.02 79.598 0 557 97 10 0 0 0 0.0018606 2 42039 79.906 70.692 1 1.0245 0.88504 0 97644000 48853000 48792000 39751 831 14980 15385 62389;62390 62390 WQNNLLPSR 9 0 1 Unmodified _WQNNLLPSR_ 0 0 0 B2R4W8;P62244;I3L3P7;A8K7H3;H3BVC7 B2R4W8 B2R4W8 hCG_1994130;RPS15A 40S ribosomal protein S15a MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.3013 2 564.301447 1126.58834 80691.9 0.5181 0.00029237 -0.03603 -2.0332E-05 0.48207 0.00027203 564.301458615863 569.305558255439 78.747 1.6171 78.747 78.298 79.915 0 543 102 10 0 0 0 0.00019483 2 41298 106.68 98.151 1 0.99658 0.86973 0 74860000 38223000 36638000 39752 831 14980 15385 62391;62392 62391 WQPGEEPAGSVVQDSR 16 0 1 Unmodified _WQPGEEPAGSVVQDSR_ 0 0 0 Q5LJA5;Q5LJA9;Q9Y5K5;Q5LJB0 Q5LJA5 Q5LJA5 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 876.415 2 871.41064 1740.80673 NaN NaN NaN -0.21374 -0.00018626 NaN NaN NaN NaN 62.058 0.3226 62.058 61.899 62.221 -3.8147E-06 0 0 0 0.0037493 1 35602 55.261 39.008 1 NaN NaN 0 5976500 0 5976500 39753 1811 14981 15386 62393 62393 WQPTASEPVK 10 1 0 Unmodified _WQPTASEPVK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EPU6;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.803 2 571.795663 1141.57677 80733.17 0.82833 0.00047363 -0.25448 -0.00014551 0.57385 0.00032813 571.794750222409 575.80317449294 42.563 0.7254 42.563 42.281 43.007 0 171 43 6 0 0 0 0.007051 1 22935 57.96 57.96 1 1.1148 1.2558 0 59041000 28225000 30815000 39754 1194;1193;1346 14982 15387 62394 62394 WQPTASEPVK 10 1 0 Unmodified _WQPTASEPVK_ 0 0 0 D3DUE6;K7EMM8;D3DUE7;Q49A26;K7EPU6;K7EQB2 D3DUE6;D3DUE7;K7EQB2 D3DUE7 N-PAC;GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 575.8025 2 571.795663 1141.57677 80714.77 0.17757 0.00010153 -0.4074 -0.00023295 -0.22983 -0.00013142 571.794793106322 575.802714726042 50.416 0.85084 50.416 50.093 50.943 3.8147E-06 295 63 8 0 0 0 0.058457 1 24064 35.152 35.152 1 2.2248 1.7866 0 14868000 4547100 10321000 39755 1194;1193;1346 14982 15387 62395 62395 WQVVDTPGILDHPLEDR 17 0 1 Unmodified _WQVVDTPGILDHPLEDR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.3398 3 664.005806 1988.99559 74253.13 0.69288 0.00046008 -0.21857 -0.00014513 0.47431 0.00031494 664.339852146046 667.34176851776 105.57 1.2641 105.57 104.94 106.21 -7.6294E-06 579 96 10 0 0 0 2.1518E-05 3 65215 70.235 65.883 1 1.0153 1.1419 0 95576000 46120000 49456000 39756 1183 14983 15388 62396;62397;62398 62397 WQVVDTPGILDHPLEDR 17 0 1 Unmodified _WQVVDTPGILDHPLEDR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3393 3 664.005806 1988.99559 73737.09 0.80611 0.00053526 -0.098262 -6.5246E-05 0.70785 0.00047002 664.339883092809 667.341778108868 104.72 1.0533 104.72 104.18 105.23 0 558 83 10 0 0 0 0.0024971 1 66197 32.981 32.981 1 1.0599 1.2152 0 177160000 87046000 90118000 39757 1183 14983 15388 62399 62399 WQVVDTPGILDHPLEDR 17 0 1 Unmodified _WQVVDTPGILDHPLEDR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 667.677 3 664.005806 1988.99559 73494.82 0.69956 0.00046451 -0.12512 -8.3077E-05 0.57444 0.00038143 664.340015777659 667.341748409123 116.13 0.86652 116.13 115.8 116.66 -7.6294E-06 245 36 12 0 0 0 2.0551E-07 2 68119 94.01 85.302 1 1.5301 1.3193 0 72261000 27216000 45044000 39758 1183 14983 15388 62400;62401 62400 WQVVDTPGILDHPLEDR 17 0 1 Unmodified _WQVVDTPGILDHPLEDR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1001.0101 2 995.505071 1988.99559 62070.68 0.40027 0.00039847 0.19427 0.0001934 0.59454 0.00059186 996.006155530403 1000.50984272196 116.13 0.3374 116.13 115.93 116.27 0 43 14 6 0 0 0 0.0070472 1 68175 35.037 29.553 1 1.8644 1.6147 0 2562600 899770 1662800 39759 1183 14983 15388 62402 62402 WQVVDTPGILDHPLEDR 17 0 1 Unmodified _WQVVDTPGILDHPLEDR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.0062 3 664.005806 1988.99559 74161.2 0.87121 0.00057849 -0.097712 -6.4881E-05 0.7735 0.00051361 664.340014757745 667.341761822358 116 0.87346 116 115.74 116.62 0 267 41 11 0 0 0 2.379E-05 2 67046 63.918 61.815 1 1.5092 1.3171 0 78548000 29754000 48794000 39760 1183 14983 15388 62403;62404 62404 WSDGLFYLGTIK 12 1 0 Unmodified _WSDGLFYLGTIK_ 0 0 0 Q9Y483;Q96G26 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.3737 2 700.366453 1398.71835 72728.02 1.3636 0.00095504 -0.44725 -0.00031324 0.91637 0.0006418 700.366295675019 704.373329603388 118.49 0.46396 118.49 118.3 118.76 0 95 26 5 0 0 0 0.018528 1 75973 40.715 36.828 1 1.1143 1.1171 0 7594000 3705700 3888300 39761 2143 14984 15389 62405 62405 WSDGLFYLGTIK 12 1 0 Unmodified _WSDGLFYLGTIK_ 0 0 0 Q9Y483;Q96G26 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.3743 2 700.366453 1398.71835 74800.66 0.94458 0.00066155 -0.048692 -3.4102E-05 0.89589 0.00062745 700.366040610592 704.373655096153 117.93 0.41749 117.93 117.74 118.16 0 93 29 4 0 0 0 0.0024048 1 77426 58.676 54.628 1 1.0486 1.0698 0 9272900 4748900 4524000 39762 2143 14984 15389 62406 62406 WSDGLFYLGTIK 12 1 0 Unmodified _WSDGLFYLGTIK_ 0 0 0 Q9Y483;Q96G26 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.3742 2 700.366453 1398.71835 73539.29 0.98478 0.0006897 -0.035951 -2.5179E-05 0.94882 0.00066452 700.867648004549 704.373418175527 130.16 0.46506 130.16 129.98 130.44 0 61 19 5 0 0 0 0.057079 1 77905 31.478 31.478 1 2.8087 2.2169 0 2024900 353500 1671400 39763 2143 14984 15389 62407 62407 WSEPNEEELIK 11 1 0 Unmodified _WSEPNEEELIK_ 0 0 0 Q6FHX6;P39748;B4DWZ4;I3L3E9 Q6FHX6 Q6FHX6 FEN1 Flap endonuclease 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.3312 2 687.332807 1372.65106 NaN NaN NaN -1.322 -0.00090862 NaN NaN NaN NaN 76.426 0.26266 76.426 76.319 76.582 0 0 0 0 0.018447 1 45062 53.597 42.107 1 NaN NaN 0 5222300 5222300 0 39764 1555 14985 15390 62408 62408 WSLALGLPLPLGEHAGR 17 0 1 Unmodified _WSLALGLPLPLGEHAGR_ 0 0 0 Q96F86 Q96F86 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.6722 3 596.336939 1785.98899 79360.47 0.99012 0.00059045 -0.61893 -0.00036909 0.37119 0.00022136 596.33583635079 599.67285338474 124.29 0.30977 124.29 124.11 124.42 0 49 19 4 0 0 0 0.00042626 1 82680 38.889 38.889 1 1.2956 1.2975 0 6829000 3286300 3542700 39765 1964 14986 15391 62409 62409 WSLLQQQK 8 1 0 Unmodified _WSLLQQQK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.7948 2 515.787641 1029.56073 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.8 1 66.8 66.3 67.3 0 0 0 0 5.681E-07 1 38566 139.27 91.093 1 + 39766 1156 14987 15392 62410 62410 WSLLQQQK 8 1 0 Unmodified _WSLLQQQK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.7877 2 515.787641 1029.56073 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.804 1 66.804 66.304 67.304 0 0 0 0 1.9115E-12 1 38567 157.86 106.08 1 + 39767 1156 14987 15392 62411 62411 WSLLQQQK 8 1 0 Unmodified _WSLLQQQK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.7943 2 515.787641 1029.56073 83261.9 0.38505 0.0001986 0.76115 0.00039259 1.1462 0.00059119 515.787779285826 519.794663332158 65.546 1.1389 65.546 64.984 66.123 0 678 96 10 0 0 0 8.2409E-09 2 38663 154.92 127.78 1 1.0735 1.2535 0 273920000 131620000 142300000 + 39768 1156 14987 15392 62412;62413 62412 WSLLQQQK 8 1 0 Unmodified _WSLLQQQK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.788 2 515.787641 1029.56073 84495.44 0.31432 0.00016212 0.34239 0.0001766 0.65671 0.00033872 515.787748474678 519.794668556761 76.314 1.23 76.314 75.942 77.172 0 447 84 8 0 0 0 0.0035264 2 40680 96.51 77.337 1 1.9021 1.5195 0 20298000 7756800 12541000 + 39769 1156 14987 15392 62414;62415 62415 WSLLQQQK 8 1 0 Unmodified _WSLLQQQK_ 0 0 0 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;F8W1U3;F8VP67;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.7945 2 515.787641 1029.56073 83970.16 0.18579 9.583E-05 0.38262 0.00019735 0.56841 0.00029318 515.787808855576 519.794710674503 76.546 1.2861 76.546 76.009 77.295 0 431 86 8 0 0 0 0.005376 2 39917 90.661 77.665 1 1.8486 1.4837 0 18194000 6297600 11897000 + 39770 1156 14987 15392 62416;62417 62416 WSPTHEQQLISGSLDNIVK 19 1 0 Unmodified _WSPTHEQQLISGSLDNIVK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.0446 3 718.039287 2151.09603 71514.92 0.69682 0.00050034 0.0055018 3.9505E-06 0.70232 0.0005043 718.039372172977 721.045014546442 104.09 1.2228 104.09 103.57 104.79 0 470 99 6 0 0 0 0.00013989 2 64079 40.952 40.952 1 0.75312 0.80682 0 32499000 17437000 15061000 39771 1792 14988 15393 62418;62419 62419 WSPTHEQQLISGSLDNIVK 19 1 0 Unmodified _WSPTHEQQLISGSLDNIVK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.7106 3 718.039287 2151.09603 71841.73 1.0078 0.00072367 -0.1721 -0.00012358 0.83574 0.00060009 718.373510353118 721.044906512839 102.73 1.0449 102.73 102.19 103.24 0 429 82 9 0 0 0 0.00012867 2 64647 41.711 41.711 1 0.7308 0.8227 0 57197000 29443000 27754000 39772 1792 14988 15393 62420;62421 62421 WSPTHEQQLISGSLDNIVK 19 1 0 Unmodified _WSPTHEQQLISGSLDNIVK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 721.0457 3 718.039287 2151.09603 71035.15 0.97788 0.00070215 0.15282 0.00010973 1.1307 0.00081188 718.373652396018 720.710872002269 114.64 0.58783 114.64 114.4 114.99 7.6294E-06 186 26 12 0 0 0 0.00012186 2 66917 42.172 42.172 1 1.2112 0.98718 0 31918000 14597000 17320000 39773 1792 14988 15393 62422;62423 62422 WSPTHEQQLISGSLDNIVK 19 1 0 Unmodified _WSPTHEQQLISGSLDNIVK_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 721.0454 3 718.039287 2151.09603 71659.95 0.79002 0.00056727 0.19 0.00013643 0.98003 0.0007037 718.373774199998 721.045061352341 114.45 0.58913 114.45 114.22 114.81 0 174 24 10 0 0 0 9.3262E-06 2 65857 56.081 56.081 1 1.1429 0.95776 0 46807000 21713000 25094000 39774 1792 14988 15393 62424;62425 62424 WSTDDVQINDISLQDYIAVK 20 1 0 Unmodified _WSTDDVQINDISLQDYIAVK_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1166.5835 2 1162.07625 2322.13796 55594.6 0.21823 0.00025359 0.6933 0.00080566 0.91152 0.0010593 1162.57831937129 1166.58492185162 123 0.39642 123 122.79 123.19 -7.6294E-06 210 30 9 0 0 0 1.3336E-07 3 79653 86.291 86.291 1 0.89798 0.9582 0 32076000 17363000 14713000 39775 160 14989 15394 62426;62427;62428 62426 WSTDDVQINDISLQDYIAVK 20 1 0 Unmodified _WSTDDVQINDISLQDYIAVK_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1162.5797 2 1162.07625 2322.13796 55784.06 0.33171 0.00038548 0.59863 0.00069565 0.93034 0.0010811 1162.57846953432 1166.58492240078 122.65 0.47306 122.65 122.42 122.9 0 212 38 8 0 0 0 4.141E-09 2 81381 94.717 94.717 1 0.94758 1.0123 0 36786000 18681000 18105000 39776 160 14989 15394 62429;62430 62430 WSTDDVQINDISLQDYIAVK 20 1 0 Unmodified _WSTDDVQINDISLQDYIAVK_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1166.5844 2 1162.07625 2322.13796 55182.49 0.33439 0.00038859 -0.43968 -0.00051095 -0.10529 -0.00012236 1162.57633882201 1166.58407606419 134.37 0.14621 134.37 134.3 134.44 0 23 5 6 0 0 0 1.971E-06 1 81138 70.47 66.154 1 1.1718 0.96797 0 31590000 14738000 16853000 39777 160 14989 15394 62431 62431 WSVESGR 7 0 1 Unmodified _WSVESGR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 410.7012 2 410.701035 819.387516 92985.1 -0.50944 -0.00020923 0.83519 0.00034301 0.32575 0.00013379 410.701268962583 415.705534599365 29.243 0.26808 29.243 29.124 29.392 0 62 17 6 0 0 0 0.028572 1 14118 71.715 31.029 1 0.69754 0.74793 0 46193000 25266000 20928000 39778 1389 14990 15395 62432 62432 WSYGAGIVLR 10 0 1 Unmodified _WSYGAGIVLR_ 0 0 0 Q9Y512 Q9Y512 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.3082 2 561.308741 1120.60293 80408.13 0.9746 0.00054705 -0.19675 -0.00011044 0.77785 0.00043661 561.308692733093 566.312368814933 92.949 0.5648 92.949 92.732 93.296 -7.6294E-06 139 48 4 0 0 0 0.037167 1 56438 47.198 37.781 1 0.8391 0.88227 0 11429000 7259800 4168700 39779 2147 14991 15396 62433 62433 WTEYGLTFTEK 11 1 0 Unmodified _WTEYGLTFTEK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.8327 2 687.832443 1373.65033 73337.63 0.77702 0.00053446 -0.11124 -7.6512E-05 0.66578 0.00045795 687.83220286569 691.839461666577 91.925 1.1831 91.925 91.338 92.521 0 565 105 7 0 0 0 0.0086859 1 55419 50.353 50.353 1 1.425 1.6151 0 92823000 39552000 53271000 39780 639 14992 15397 62434 62434 WTEYGLTFTEK 11 1 0 Unmodified _WTEYGLTFTEK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 687.8318 2 687.832443 1373.65033 73976.13 0.83854 0.00057678 -0.33413 -0.00022983 0.50441 0.00034695 687.832017074457 691.839360129353 91.108 1.2716 91.108 90.416 91.688 0 546 106 7 0 0 0 7.8729E-05 3 56119 98.055 86.419 1 1.3275 1.4976 0 126620000 55378000 71238000 39781 639 14992 15397 62435;62436;62437 62436 WTEYGLTFTEK 11 1 0 Unmodified _WTEYGLTFTEK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 691.8403 2 687.832443 1373.65033 73823.88 0.57387 0.00039473 0.12937 8.8988E-05 0.70324 0.00048371 687.832214637942 691.839474070527 105.12 0.95271 105.12 104.61 105.56 0 282 59 8 0 0 0 0.00016552 2 60017 94.297 94.297 1 2.1808 1.7133 0 11252000 3316500 7935300 39782 639 14992 15397 62438;62439 62439 WTEYGLTFTEK 11 1 0 Unmodified _WTEYGLTFTEK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 691.8402 2 687.832443 1373.65033 72945.47 0.49081 0.00033759 0.24321 0.00016728 0.73401 0.00050488 687.832349909434 691.839522886293 105.01 0.88786 105.01 104.54 105.42 0 226 51 6 0 0 0 0.026417 1 59037 40.727 40.727 1 1.9976 1.6424 0 9916100 2990600 6925500 39783 639 14992 15397 62440 62440 WTLLQEQGTK 10 1 0 Unmodified _WTLLQEQGTK_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;F8W0C6 B2R853;CON__P04259;CON__P13647 CON__P13647 KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.3221 2 602.322045 1202.62954 NaN NaN NaN -0.64729 -0.00038988 NaN NaN NaN NaN 71.912 0.89763 71.912 71.542 72.44 0 0 0 0 1.6519E-05 2 42090 104.2 92.353 1 NaN NaN 0 101310000 101310000 0 + 39784 1162;859;1154 14993 15398 62441;62442 62442 WTLLQEQGTK 10 1 0 Unmodified _WTLLQEQGTK_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;F8W0C6 B2R853;CON__P04259;CON__P13647 CON__P13647 KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.3219 2 602.322045 1202.62954 NaN NaN NaN -0.058291 -3.511E-05 NaN NaN NaN NaN 81.972 1.0038 81.972 81.56 82.563 0 0 0 0 4.2294E-22 1 44430 153.08 136.88 1 NaN NaN 0 19638000 19638000 0 + 39785 1162;859;1154 14993 15398 62443 62443 WTLLQEQGTK 10 1 0 Unmodified _WTLLQEQGTK_ 0 0 0 B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4;CON__P13647;P13647;B4E1T1;F8W0C6 B2R853;CON__P04259;CON__P13647 CON__P13647 KRT6C;KRT6A;KRT5 Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.3222 2 602.322045 1202.62954 NaN NaN NaN -0.036633 -2.2065E-05 NaN NaN NaN NaN 82.164 0.68581 82.164 81.773 82.459 0 0 0 0 0.00010667 1 43703 96.034 86.253 1 NaN NaN 0 19192000 19192000 0 + 39786 1162;859;1154 14993 15398 62444 62444 WTLLQEQK 8 1 0 Unmodified _WTLLQEQK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 523.2872 2 523.287474 1044.5604 NaN NaN NaN 0.54334 0.00028432 NaN NaN NaN NaN 69.972 1.0161 69.972 69.465 70.481 0 0 0 0 0.0029782 1 40621 105.04 77.336 1 NaN NaN 0 18629000 18629000 0 + 39787 1171;1158 14994 15399 62445 62445 WTLLQEQK 8 1 0 Unmodified _WTLLQEQK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.2953 2 523.287474 1044.5604 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.633 1 69.633 69.133 70.133 0 0 0 0 0.03005 1 40473 62.88 34.393 1 + 39788 1171;1158 14994 15399 62446 62446 WTLLQEQK 8 1 0 Unmodified _WTLLQEQK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__Q3KNV1 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 523.2877 2 523.287474 1044.5604 83934.02 0.33293 0.00017422 0.54341 0.00028436 0.87634 0.00045858 523.287533435169 527.294609134416 68.614 0.91853 68.614 68.229 69.148 0 261 76 4 0 0 0 0.0076818 1 40718 81.89 55.288 1 0.82389 0.89685 0 39709000 22127000 17581000 + 39789 1171;1158 14994 15399 62447 62447 WTTLNSLQLHGLQLR 15 0 1 Unmodified _WTTLNSLQLHGLQLR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.3347 3 594.000327 1778.97915 79963.85 0.78753 0.00046779 0.053373 3.1703E-05 0.8409 0.0004995 594.00049002281 597.33644897641 106.15 0.56151 106.15 105.85 106.41 0 177 39 6 0 0 0 0.0012918 2 65829 39.005 39.005 1 1.0922 1.1268 0 10244000 4674400 5569300 39790 1694 14995 15400 62448;62449 62449 WTTLNSLQLHGLQLR 15 0 1 Unmodified _WTTLNSLQLHGLQLR_ 0 0 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.3347 3 594.000327 1778.97915 78540.72 0.8503 0.00050508 -0.097247 -5.7765E-05 0.75306 0.00044732 594.334463189274 597.670521998025 105.12 0.67291 105.12 104.79 105.46 0 223 51 7 0 0 0 0.00023849 3 66785 48.112 48.112 1 1.0398 1.0579 0 20491000 9798800 10692000 39791 1694 14995 15400 62450;62451;62452 62452 WVEISNEVR 9 0 1 Unmodified _WVEISNEVR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 566.2933 2 566.293288 1130.57202 79531.1 0.76795 0.00043488 0.29587 0.00016755 1.0638 0.00060243 566.293284134843 571.297612017432 65.911 0.98952 65.911 65.685 66.675 0 296 87 9 0 0 0 0.001665 2 37933 82.452 50.007 1 0.50265 0.56918 0 105470000 68795000 36678000 39792 1244 14996 15401 62453;62454 62453 WVEISNEVR 9 0 1 Unmodified _WVEISNEVR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 571.2977 2 566.293288 1130.57202 NaN NaN NaN -0.027343 -1.5484E-05 NaN NaN NaN NaN 75.703 1.296 75.703 75.432 76.728 0 0 0 0 0.023349 1 40229 56.258 31.335 1 NaN NaN 0 12339000 0 12339000 39793 1244 14996 15401 62455 62455 WVEISNEVR 9 0 1 Unmodified _WVEISNEVR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;Q05BZ1;Q9BQR2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 571.2979 2 566.293288 1130.57202 NaN NaN NaN 0.1584 8.9703E-05 NaN NaN NaN NaN 76.005 1.0257 76.005 75.778 76.803 0 0 0 0 0.019876 1 39627 58.981 32.379 1 NaN NaN 0 10519000 0 10519000 39794 1244 14996 15401 62456 62456 WVGGPEIELIAIATGGR 17 0 1 Unmodified _WVGGPEIELIAIATGGR_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;Q96GI1;B4DX08;B4DZY9 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.9835 2 869.977961 1737.94137 69952.01 0.81985 0.00071325 0.1144 9.9525E-05 0.93425 0.00081278 870.478610553754 874.982200185241 132.57 0.42999 132.57 132.33 132.76 1.5259E-05 66 27 5 0 0 0 6.7747E-05 1 86560 72.089 72.089 1 3.4544 3.7377 0 2234000 451980 1782000 39795 960 14997 15402 62457 62457 WVGGPEIELIAIATGGR 17 0 1 Unmodified _WVGGPEIELIAIATGGR_ 0 0 0 B4DE30;E7ENZ3;B4DYC8;B7ZAR1;B4DDU6;B4DZT5;B4DXI1;E9PCA1;Q9BU08;V9HW37;P48643;Q96GI1;B4DX08;B4DZY9 B4DE30 B4DE30 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.9836 2 869.977961 1737.94137 NaN NaN NaN 0.08743 7.6062E-05 NaN NaN NaN NaN 132.1 0.39673 132.1 131.93 132.33 0 0 0 0 0.0031776 1 88405 53.252 40.271 1 NaN NaN 0 3133200 0 3133200 39796 960 14997 15402 62458 62458 WVLTGTPIQNSLK 13 1 0 Unmodified _WVLTGTPIQNSLK_ 0 0 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;H7C5K0 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 728.9111 2 728.911559 1455.80856 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.47 1 101.47 100.97 101.97 0 0 0 0 0.015917 1 62361 50.292 20.038 1 39797 512 14998 15403 62459 62459 WVSSLAVHPAGDNVICGSYDSK 22 1 0 Unmodified _WVSSLAVHPAGDNVICGSYDSK_ 0 0 0 Q14137;B2RDN4;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.0424 3 788.042591 2361.10594 69707.98 0.57783 0.00045535 0.56253 0.0004433 1.1404 0.00089865 788.042935417291 791.048542783643 86.047 0.67217 86.047 85.748 86.42 0 273 55 8 0 0 0 0.00044188 5 51643 33.747 33.747 1 0.72676 0.71681 0 19445000 10655000 8789700 39798 1726 14999 15404 62460;62461;62462;62463;62464 62462 WVSSLAVHPAGDNVICGSYDSK 22 1 0 Unmodified _WVSSLAVHPAGDNVICGSYDSK_ 0 0 0 Q14137;B2RDN4;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.3773 3 788.042591 2361.10594 69662.32 1.0263 0.00080873 -0.11284 -8.8924E-05 0.91341 0.00071981 788.377066210401 791.382911560217 84.951 0.59972 84.951 84.724 85.324 -7.6294E-06 246 51 8 0 0 0 2.3806E-05 1 52238 36.923 29.026 1 0.70757 0.75022 0 20387000 9129100 11258000 39799 1726 14999 15404 62465 62465 WVSSLAVHPAGDNVICGSYDSK 22 1 0 Unmodified _WVSSLAVHPAGDNVICGSYDSK_ 0 0 0 Q14137;B2RDN4;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 791.0495 3 788.042591 2361.10594 68100.86 0.63428 0.00049984 -0.035329 -2.7841E-05 0.59895 0.000472 788.376764293686 791.048285762928 98.311 0.55627 98.311 98.041 98.597 0 215 32 10 0 0 0 0.013451 2 55357 20.657 17.513 1 1.2574 1.0091 0 8088200 3743400 4344800 39800 1726 14999 15404 62466;62467 62466 WVSSLAVHPAGDNVICGSYDSK 22 1 0 Unmodified _WVSSLAVHPAGDNVICGSYDSK_ 0 0 0 Q14137;B2RDN4;B4DEN9;Q4G0D9;Q6DKJ9 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 791.049 3 788.042591 2361.10594 68271.55 0.70915 0.00055884 -0.61346 -0.00048343 0.095688 7.5407E-05 788.376416325189 791.047868624901 98.108 0.66122 98.108 97.819 98.48 7.6294E-06 243 40 10 0 0 0 0.0014009 1 54459 26.477 23.14 1 1.291 1.0596 0 9161200 4102300 5058900 39801 1726 14999 15404 62468 62468 WYDLEYSNEYSLKPQPQDVVSK 22 2 0 Unmodified _WYDLEYSNEYSLKPQPQDVVSK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 902.1057 3 896.765781 2687.27551 NaN NaN NaN -1.1562 -0.0010369 NaN NaN NaN NaN 96.592 0.24171 96.592 96.491 96.733 0 0 0 0 0.037157 1 58875 28.813 25.826 1 NaN NaN 0 5940600 0 5940600 39802 836;1683 15000 15405 62469 62469 WYDLEYSNEYSLKPQPQDVVSK 22 2 0 Unmodified _WYDLEYSNEYSLKPQPQDVVSK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.4448 3 896.765781 2687.27551 64732.74 0.96031 0.00086117 -0.67151 -0.00060219 0.28879 0.00025898 897.432566180551 902.443342856598 95.864 0.20729 95.864 95.733 95.94 0 51 16 5 0 0 0 0.001765 4 59702 28.178 28.178 1 0.66637 0.7602 0 12111000 5148200 6962700 39803 836;1683 15000 15405 62470;62471;62472;62473 62473 WYDLEYSNEYSLKPQPQDVVSK 22 2 0 Unmodified _WYDLEYSNEYSLKPQPQDVVSK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 897.1003 3 896.765781 2687.27551 63714.05 0.55861 0.00050095 0.078796 7.0662E-05 0.63741 0.00057161 897.100185456042 902.442562254626 109.15 0.4946 109.15 109.01 109.5 0 130 23 10 0 0 0 2.9093E-05 2 62865 39.288 39.288 1 1.147 0.9849 0 7404300 3389100 4015200 39804 836;1683 15000 15405 62474;62475 62475 WYDLEYSNEYSLKPQPQDVVSK 22 2 0 Unmodified _WYDLEYSNEYSLKPQPQDVVSK_ 0 0 1 B2R5U7;Q03701 B2R5U7;Q03701 B2R5U7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 902.4438 3 896.765781 2687.27551 62887.55 0.32575 0.00029212 0.37685 0.00033794 0.70259 0.00063006 897.100328652582 902.443426686273 109.13 0.42499 109.13 108.95 109.38 -7.6294E-06 108 18 9 0 0 0 0.0020299 1 61887 26.84 26.84 1 1.0774 0.91482 0 5980200 2915800 3064400 39805 836;1683 15000 15405 62476 62476 YAAPEQNNDPQQSK 14 1 0 Unmodified _YAAPEQNNDPQQSK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 799.3716 2 795.363158 1588.71176 68402.22 0.75916 0.0006038 0.11569 9.2017E-05 0.87485 0.00069582 795.363187437386 799.370420742651 18.407 0.27625 18.407 18.296 18.572 0 49 10 8 0 0 0 2.8627E-57 2 5321 193.28 169.93 1 0.87495 0.94457 0 34782000 18523000 16259000 39806 486 15001 15406 62477;62478 62477 YAAPEQNNDPQQSK 14 1 0 Unmodified _YAAPEQNNDPQQSK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 795.3627 2 795.363158 1588.71176 68432.24 0.55676 0.00044283 -0.1464 -0.00011644 0.41036 0.00032638 795.362327251987 799.370568036855 18.345 0.19779 18.345 18.238 18.435 0 17 6 5 0 0 0 4.0619E-06 2 5078 100.69 88.451 1 0.86854 0.89094 0 9450100 5063000 4387100 39807 486 15001 15406 62479;62480 62479 YAAPEQNNDPQQSK 14 1 0 Unmodified _YAAPEQNNDPQQSK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 795.3643 2 795.363158 1588.71176 67601.14 0.11152 8.8696E-05 0.61236 0.00048705 0.72388 0.00057575 795.363689452219 799.370659411143 19.95 0.32416 19.95 19.798 20.123 0 107 17 9 0 0 0 0.028332 1 5479 31.597 31.597 1 1.4708 1.1659 0 6378500 2637500 3741000 39808 486 15001 15406 62481 62481 YADLTEDQLPSCESLK 16 1 0 Unmodified _YADLTEDQLPSCESLK_ 0 0 0 B4DMJ7;B4DKL5;Q6P6D7;Q6FHU2;Q6FHK8;Q53G35;P18669;Q0D2Q6 B4DMJ7 B4DMJ7 hCG_2015269;PGAM1 Phosphoglycerate mutase;Phosphoglycerate mutase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 938.9407 2 934.932756 1867.85096 NaN NaN NaN -0.48181 -0.00045046 NaN NaN NaN NaN 82.823 0.31821 82.823 82.68 82.998 0 0 0 0 1.1127E-08 1 49478 99.011 90.056 1 NaN NaN 0 4769300 0 4769300 39809 991 15002 15407 62482 62482 YADVIIPR 8 0 1 Unmodified _YADVIIPR_ 0 0 0 A0A024R912;Q9BZX2;A0A0S2Z5Y6;A0A0S2Z601;Q9HA47 A0A024R912 A0A024R912 UCK2;UCK1 Uridine kinase;Uridine-cytidine kinase 2;Uridine-cytidine kinase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.7768 2 473.77146 945.528367 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.943 1 68.943 68.443 69.443 0 0 0 0 0.034622 1 40991 60.682 37.158 1 39810 268 15003 15408 62483 62483 YAELSEEDLK 10 1 0 Unmodified _YAELSEEDLK_ 0 0 0 Q4G0N4 Q4G0N4 Q4G0N4 NADK2 NAD kinase 2, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.7968 2 598.787701 1195.56085 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.955 1 53.955 53.455 54.455 -3.8147E-06 0 0 0 0.014006 1 30835 56.013 24.94 1 39811 1780 15004 15409 62484 62484 YAFSGVAFTGAK 12 1 0 Unmodified _YAFSGVAFTGAK_ 0 0 0 H7BZ20;Q6FGU2;Q53F55;P23919 H7BZ20 H7BZ20 DTYMK Thymidylate kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 613.8184 2 609.811313 1217.60807 NaN NaN NaN -0.36504 -0.0002226 NaN NaN NaN NaN 82.818 0.51408 82.818 82.577 83.091 0 0 0 0 0.0080792 1 50652 57.347 37.018 1 NaN NaN 0 9881400 0 9881400 39812 1313 15005 15410 62485 62485 YAGPEDDAAITLAFSK 16 1 0 Unmodified _YAGPEDDAAITLAFSK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.9084 2 834.90941 1667.80427 NaN NaN NaN 0.19532 0.00016308 NaN NaN NaN NaN 103.51 0.96831 103.51 103.06 104.03 7.6294E-06 0 0 0 0.0045082 1 63577 54.343 47.959 1 NaN NaN 0 52790000 52790000 0 39813 1679 15006 15411 62486 62486 YAGPEDDAAITLAFSK 16 1 0 Unmodified _YAGPEDDAAITLAFSK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.909 2 834.90941 1667.80427 NaN NaN NaN 0.065682 5.4839E-05 NaN NaN NaN NaN 102.79 0.96055 102.79 102.37 103.33 0 0 0 0 3.1423E-06 1 64706 83.204 76.82 1 NaN NaN 0 57559000 57559000 0 39814 1679 15006 15411 62487 62487 YAGPEDDAAITLAFSK 16 1 0 Unmodified _YAGPEDDAAITLAFSK_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.9105 2 834.90941 1667.80427 NaN NaN NaN 0.14643 0.00012225 NaN NaN NaN NaN 115.45 0.83728 115.45 115.14 115.98 0 0 0 0 1.7242E-12 1 67569 109.22 102.84 1 NaN NaN 0 15916000 15916000 0 39815 1679 15006 15411 62488 62488 YAHVVLR 7 0 1 Unmodified _YAHVVLR_ 0 0 0 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 429.2538 2 429.253237 856.491922 90079.21 -0.022454 -9.6385E-06 -0.95547 -0.00041014 -0.97792 -0.00041978 429.253060399146 434.256488735315 27.373 1.3138 27.373 26.978 28.291 -1.9073E-06 257 82 9 0 0 0 1.2133E-06 2 12547 154.34 131.3 1 1.2744 1.5077 0 309910000 137180000 172730000 39816 1639 15007 15412 62489;62490 62490 YAHVVLR 7 0 1 Unmodified _YAHVVLR_ 0 0 0 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 429.2532 2 429.253237 856.491922 90678.06 0.023558 1.0112E-05 0.323 0.00013865 0.34656 0.00014876 429.253386515846 434.257296473918 26.519 1.1038 26.519 25.801 26.905 0 203 60 9 0 0 0 0.0082866 2 11892 128 101.89 1 1.1017 1.2913 0 738300000 333730000 404560000 39817 1639 15007 15412 62491;62492 62492 YAHVVLR 7 0 1 Unmodified _YAHVVLR_ 0 0 0 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 434.2571 2 429.253237 856.491922 NaN NaN NaN 0.29096 0.0001249 NaN NaN NaN NaN 30.144 0.67167 30.144 29.934 30.606 1.9073E-06 0 0 0 0.03466 1 11914 65.897 51.836 1 NaN NaN 0 7443800 0 7443800 39818 1639 15007 15412 62493 62493 YAICSALAASALPALVMSK 19 1 0 Oxidation (M) _YAICSALAASALPALVM(ox)SK_ YAICSALAASALPALVM(1)SK YAICSALAASALPALVM(103.83)SK 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;B4DMJ2;H3BTP7 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 981.5226 2 977.012829 1952.01111 60725.74 0.59113 0.00057754 -0.13553 -0.00013242 0.4556 0.00044512 977.514552255479 981.521400597006 121.43 0.71622 121.43 121.11 121.82 7.6294E-06 374 46 11 0 0 0 2.9736E-12 2 78300 103.83 103.83 1 0.94253 1.0717 0 165820000 88767000 77055000 39819 1548 15008 15413 62494;62495 62494 1305 YAICSALAASALPALVMSK 19 1 0 Oxidation (M) _YAICSALAASALPALVM(ox)SK_ YAICSALAASALPALVM(1)SK YAICSALAASALPALVM(77.53)SK 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;B4DMJ2;H3BTP7 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.0202 2 977.012829 1952.01111 60831.21 0.39118 0.00038219 0.23451 0.00022912 0.62569 0.00061131 977.515070074861 981.020305031551 120.98 0.82475 120.98 120.52 121.34 -7.6294E-06 355 53 12 0 0 0 3.3969E-06 2 79849 77.527 77.527 1 0.94139 1.0884 0 199730000 93674000 106060000 39820 1548 15008 15413 62496;62497 62496 1305 YAICSALAASALPALVMSK 19 1 0 Oxidation (M) _YAICSALAASALPALVM(ox)SK_ YAICSALAASALPALVM(1)SK YAICSALAASALPALVM(85.84)SK 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;B4DMJ2;H3BTP7 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 977.5157 2 977.012829 1952.01111 60866.46 0.57407 0.00056088 0.45526 0.00044479 1.0293 0.0010057 977.515459746736 981.01999819996 134.11 0.42853 134.11 133.84 134.26 0 116 18 10 0 0 0 5.7222E-07 2 81757 85.837 80.453 1 0.66799 0.54359 0 30709000 18097000 12612000 39821 1548 15008 15413 62498;62499 62499 1305 YAICSALAASALPALVMSK 19 1 0 Oxidation (M) _YAICSALAASALPALVM(ox)SK_ YAICSALAASALPALVM(1)SK YAICSALAASALPALVM(103.21)SK 0 1 0 P36578;Q59GY2;B4DMJ6;H3BM89;B4DFI6;B4DMJ2;H3BTP7 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 977.5174 2 977.012829 1952.01111 61045.7 0.7474 0.00073022 1.0095 0.00098633 1.7569 0.0017165 977.516264006799 981.020411615344 133.91 0.53104 133.91 133.61 134.14 -1.5259E-05 166 25 11 0 0 0 3.1821E-12 1 80706 103.21 103.21 1 0.75644 0.61527 0 25232000 13768000 11464000 39822 1548 15008 15413 62500 62500 1305 YAILNEPFK 9 1 0 Unmodified _YAILNEPFK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 551.8052 2 547.797675 1093.5808 81089.66 0.56224 0.000308 0.15474 8.4767E-05 0.71698 0.00039276 547.79767555498 551.804792682077 97.697 1.0625 97.697 97.288 98.351 -7.6294E-06 270 65 8 0 0 0 0.0060214 2 54928 65.246 47.861 1 1.9895 1.6191 0 30756000 10154000 20601000 39823 515 15009 15414 62501;62502 62501 YAILNEPFK 9 1 0 Unmodified _YAILNEPFK_ 0 0 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 551.8055 2 547.797675 1093.5808 81769.3 0.41282 0.00022614 0.16604 9.0956E-05 0.57886 0.0003171 547.797673900939 551.8047632687 97.52 1.1945 97.52 97.131 98.326 0 218 67 7 0 0 0 0.00021282 2 54016 106.04 83.911 1 2.0506 1.6825 0 27493000 9728800 17764000 39824 515 15009 15414 62503;62504 62503 YAINPHLTEDQR 12 0 1 Unmodified _YAINPHLTEDQR_ 0 0 0 B2RAR2;Q9ULX3 B2RAR2 B2RAR2 NOB1 RNA-binding protein NOB1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 733.8663 2 728.862597 1455.71064 NaN NaN NaN -0.17303 -0.00012611 NaN NaN NaN NaN 45.702 0.14967 45.702 45.625 45.775 0 0 0 0 0.002054 1 24619 71.03 24.872 1 NaN NaN 0 3760600 0 3760600 39825 874 15010 15415 62505 62505 YAIQLITAASLVCR 14 0 1 Unmodified _YAIQLITAASLVCR_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 789.9384 2 789.93725 1577.85995 69023.55 0.6917 0.0005464 -0.11199 -8.8462E-05 0.57971 0.00045794 789.937262488313 794.941556633758 130.19 0.46854 130.19 129.98 130.45 0 112 22 7 0 0 0 1.1878E-05 2 78853 98.898 85.471 1 1.1697 1.0032 0 6217400 2949200 3268200 39826 2120 15011 15416 62506;62507 62506 YAIQLITAASLVCR 14 0 1 Unmodified _YAIQLITAASLVCR_ 0 0 0 Q9Y230;B3KNL2 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 794.9428 2 789.93725 1577.85995 69309.59 1.1081 0.00087535 -0.34719 -0.00027426 0.76093 0.00060109 789.936742274879 794.941649701057 130 0.49911 130 129.72 130.22 0 75 18 6 0 0 0 0.00022772 2 77847 65.395 55.653 1 1.1232 0.93193 0 5662800 2504700 3158100 39827 2120 15011 15416 62508;62509 62508 YALIQHQK 8 1 0 Unmodified _YALIQHQK_ 0 0 0 P49711;V9GY73;A6XGM9;B2RA05;Q8NI51 P49711 P49711 CTCF;CTCFL Transcriptional repressor CTCF;Transcriptional repressor CTCFL MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 500.7823 2 500.782359 999.550165 86660.84 0.025627 1.2834E-05 0.23786 0.00011912 0.26349 0.00013195 500.782400389541 504.789125182433 23.694 0.37884 23.694 23.507 23.885 0 72 17 7 0 0 0 0.0010071 1 9540 132.72 118.79 1 0.52156 0.55951 0 32646000 21472000 11175000 39828 1585 15012 15417 62510 62510 YALIQHQK 8 1 0 Unmodified _YALIQHQK_ 0 0 0 P49711;V9GY73;A6XGM9;B2RA05;Q8NI51 P49711 P49711 CTCF;CTCFL Transcriptional repressor CTCF;Transcriptional repressor CTCFL MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 500.7828 2 500.782359 999.550165 87072.81 -0.061588 -3.0842E-05 0.26491 0.00013266 0.20332 0.00010182 500.782421501285 504.789475847827 23.276 0.36328 23.276 23.039 23.402 0 62 12 7 0 0 0 0.001025 1 9132 128.75 115.77 1 0.42928 0.47603 0 47747000 32851000 14896000 39829 1585 15012 15417 62511 62511 YALIQHQK 8 1 0 Unmodified _YALIQHQK_ 0 0 0 P49711;V9GY73;A6XGM9;B2RA05;Q8NI51 P49711 P49711 CTCF;CTCFL Transcriptional repressor CTCF;Transcriptional repressor CTCFL MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.7825 2 500.782359 999.550165 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.66 1 25.66 25.16 26.16 0 0 0 0 0.041316 1 9445 57.463 38.658 1 39830 1585 15012 15417 62512 62512 YALIQHQK 8 1 0 Unmodified _YALIQHQK_ 0 0 0 P49711;V9GY73;A6XGM9;B2RA05;Q8NI51 P49711 P49711 CTCF;CTCFL Transcriptional repressor CTCF;Transcriptional repressor CTCFL MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 504.7897 2 500.782359 999.550165 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.685 1 25.685 25.185 26.185 0 0 0 0 0.011964 1 9463 74.335 47.198 1 39831 1585 15012 15417 62513 62513 YALIQHQK 8 1 0 Unmodified _YALIQHQK_ 0 0 0 P49711;V9GY73;A6XGM9;B2RA05;Q8NI51 P49711 P49711 CTCF;CTCFL Transcriptional repressor CTCF;Transcriptional repressor CTCFL MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.7896 2 500.782359 999.550165 86882.2 0.2075 0.00010391 0.3412 0.00017087 0.5487 0.00027478 500.782248135098 504.789489108327 25.631 0.65514 25.631 25.3 25.955 0 103 27 7 0 0 0 0.0077998 2 8919 83.801 79.664 1 0.66134 0.52097 0 3879700 2215200 1664500 39832 1585 15012 15417 62514;62515 62515 YALQMEQLNGILLHLESELAQTR 23 0 1 Oxidation (M) _YALQM(ox)EQLNGILLHLESELAQTR_ YALQM(1)EQLNGILLHLESELAQTR YALQM(172.42)EQLNGILLHLESELAQTR 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.8044 3 896.13381 2685.3796 63134.38 0.25793 0.00023114 -0.48728 -0.00043667 -0.22935 -0.00020553 896.468310936471 899.803651622889 133.3 0.4288 133.3 133.16 133.59 0 58 11 11 0 0 0 2.1713E-60 3 87300 172.42 172.42 1 1.4216 1.6818 0 313220000 128410000 184810000 39833 316 15013 15418 62516;62517;62518 62516 238 YALTGDEVK 9 1 0 Unmodified _YALTGDEVK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 502.2626 2 498.25584 994.497126 83864.65 0.50004 0.00024915 0.028329 1.4115E-05 0.52837 0.00026326 498.255824115001 502.262976095486 41.041 1.2304 41.041 40.619 41.849 3.8147E-06 457 104 8 0 0 0 0.0016026 2 21406 83.265 42.88 1 1.0529 1.2453 0 412920000 214470000 198460000 39834 824 15014 15419 62519;62520 62520 YALTGDEVK 9 1 0 Unmodified _YALTGDEVK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.2563 2 498.25584 994.497126 83888.73 0.5158 0.000257 0.029379 1.4638E-05 0.54518 0.00027164 498.255760005952 502.262995210231 39.814 0.98582 39.814 39.519 40.505 0 417 79 8 0 0 0 2.434E-05 2 21080 114.5 67.431 1 1.0398 1.2252 0 580210000 277840000 302370000 39835 824 15014 15419 62521;62522 62522 YALTGDEVK 9 1 0 Unmodified _YALTGDEVK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 502.2633 2 498.25584 994.497126 85117.59 0.062523 3.1153E-05 0.037768 1.8818E-05 0.10029 4.9971E-05 498.255795879978 502.262922248776 46.968 1.8174 46.968 46.363 48.181 -3.8147E-06 621 126 7 0 0 0 0.002377 4 22612 74.486 34.823 1 0.93572 0.78487 0 52352000 26878000 25474000 39836 824 15014 15419 62523;62524;62525;62526 62524 YALTGDEVK 9 1 0 Unmodified _YALTGDEVK_ 0 0 0 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 498.2561 2 498.25584 994.497126 84922.84 -0.18626 -9.2806E-05 0.41125 0.00020491 0.22499 0.0001121 498.255986407983 502.263082675119 47.253 1.7056 47.253 46.677 48.383 3.8147E-06 634 135 8 0 0 0 0.00034507 7 22567 101.33 54.26 1 0.96021 0.80228 0 43455000 22819000 20635000 39837 824 15014 15419 62527;62528;62529;62530;62531;62532;62533 62529 YALTGDEVKK 10 2 0 Unmodified _YALTGDEVKK_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 570.3176 2 562.303321 1122.59209 80604.57 0.54921 0.00030882 -0.45219 -0.00025427 0.097017 5.4553E-05 562.302983618354 570.317363224193 26.782 0.32571 26.782 26.585 26.91 1.9073E-06 120 21 9 0 0 0 4.7843E-08 1 12088 120.15 95.336 1 0.95145 1.123 0 79559000 44403000 35156000 39838 824 15015 15420 62534 62534 YALTGDEVKK 10 2 0 Unmodified _YALTGDEVKK_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 375.5393 3 375.20464 1122.59209 98617.98 0.0222 8.3295E-06 0.23365 8.7667E-05 0.25585 9.5997E-05 375.204687030383 380.547451278678 26.762 0.29003 26.762 26.62 26.91 0 66 19 5 0 0 0 0.0096972 1 12096 32.329 27.432 1 0.74237 0.88585 0 18436000 9050400 9385700 39839 824 15015 15420 62535 62535 YALTGDEVKK 10 2 0 Unmodified _YALTGDEVKK_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 570.3189 2 562.303321 1122.59209 80324.45 0.42347 0.00023812 -0.19792 -0.00011129 0.22555 0.00012683 562.303086376653 570.317438160688 26.295 0.58657 26.295 25.916 26.503 0 108 31 6 0 0 0 1.4084E-05 1 11657 106.42 84.463 1 0.95333 1.1043 0 55809000 28032000 27777000 39840 824 15015 15420 62536 62536 YALTGDEVKK 10 2 0 Unmodified _YALTGDEVKK_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 562.3032 2 562.303321 1122.59209 79447.77 0.40864 0.00022978 -0.71174 -0.00040021 -0.30309 -0.00017043 562.302691819649 570.317247096716 30.424 0.62263 30.424 30.166 30.788 0 213 40 8 0 0 0 0.0092412 2 12564 60.045 54.124 1 1.0379 0.88246 0 34666000 17310000 17356000 39841 824 15015 15420 62537;62538 62538 YALTGDEVKK 10 2 0 Unmodified _YALTGDEVKK_ 0 0 1 B2R491;P62701;Q96IR1;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;B7Z1M6;Q53HI6 B2R491 B2R491 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.7559 2 562.303321 1122.59209 80660.39 0.27676 0.00015562 -0.046157 -2.5954E-05 0.2306 0.00012967 562.303170818285 570.31748802888 30.507 0.70517 30.507 30.266 30.971 0 201 40 8 0 0 0 0.023978 1 12252 59.597 43.453 1 1.0037 0.8527 0 27676000 12881000 14795000 39842 824 15015 15420 62539 62539 YALYDATYETK 11 1 0 Unmodified _YALYDATYETK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;Q549N0;Q9Y281 G3V1A4 G3V1A4 CFL1;HEL-S-15;CFL2 Cofilin-1;Cofilin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 673.3242 2 669.316625 1336.6187 74160.48 0.43672 0.0002923 0.014555 9.7418E-06 0.45127 0.00030204 669.316609739643 673.32368229483 65.08 1.0668 65.08 64.523 65.59 7.6294E-06 414 96 7 0 0 0 0.00034828 2 37229 85.533 67.308 1 4.1658 4.4898 0 41221000 8012000 33209000 39843 1242 15016 15421 62540;62541 62540 YALYDATYETK 11 1 0 Unmodified _YALYDATYETK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;Q549N0;Q9Y281 G3V1A4 G3V1A4 CFL1;HEL-S-15;CFL2 Cofilin-1;Cofilin-2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.3268 2 669.316625 1336.6187 74475.1 0.52876 0.00035391 -0.15545 -0.00010404 0.37331 0.00024987 669.31650175715 673.323584109586 63.93 0.94524 63.93 63.377 64.323 3.8147E-06 378 85 7 0 0 0 6.8436E-08 2 37351 114.5 100.29 1 4.467 5.0367 0 67259000 13610000 53650000 39844 1242 15016 15421 62542;62543 62542 YALYDATYETK 11 1 0 Unmodified _YALYDATYETK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;Q549N0;Q9Y281 G3V1A4 G3V1A4 CFL1;HEL-S-15;CFL2 Cofilin-1;Cofilin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 673.3237 2 669.316625 1336.6187 76184.77 0.65612 0.00043915 -0.16886 -0.00011302 0.48726 0.00032613 669.316379245208 673.323497803617 74.866 0.73716 74.866 74.488 75.225 -7.6294E-06 249 53 7 0 0 0 0.0092202 2 39628 49.5 49.5 1 3.7165 2.9598 0 6736200 1419000 5317200 39845 1242 15016 15421 62544;62545 62544 YALYDATYETK 11 1 0 Unmodified _YALYDATYETK_ 0 0 0 G3V1A4;V9HWI5;E9PK25;P23528;E9PP50;E9PLJ3;B4E112;E9PQB7;Q549N0;Q9Y281 G3V1A4 G3V1A4 CFL1;HEL-S-15;CFL2 Cofilin-1;Cofilin-2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 673.324 2 669.316625 1336.6187 76489.53 0.44285 0.00029641 -0.062513 -4.1841E-05 0.38034 0.00025456 669.316206866174 673.323626385345 75.322 0.76044 75.322 74.935 75.695 0 243 55 7 0 0 0 0.038119 1 39068 36.334 31.883 1 3.6388 2.9676 0 5784300 1236900 4547400 39846 1242 15016 15421 62546 62546 YANEVNSDAGAFK 13 1 0 Unmodified _YANEVNSDAGAFK_ 0 0 0 Q9UHB9;B4DVI7;Q96K98;Q96K97 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 697.3274 2 693.320231 1384.62591 72571.02 0.87704 0.00060807 -0.16579 -0.00011495 0.71125 0.00049312 693.320014143628 697.327114812514 41.517 0.4614 41.517 41.253 41.715 0 119 40 4 0 0 0 2.058E-13 1 21856 129.16 124.74 1 1.15 1.2001 0 16774000 6301900 10472000 39847 2101 15017 15422 62547 62547 YAPGDAVEK 9 1 0 Unmodified _YAPGDAVEK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.235 2 475.234907 948.455261 86991.52 -0.24117 -0.00011461 0.46954 0.00022314 0.22837 0.00010853 475.235091063045 479.242140627446 23.217 0.76157 23.217 22.946 23.707 -1.9073E-06 145 37 6 0 0 0 0.013595 1 9104 56.434 56.434 1 0.8992 1.0228 0 166880000 85161000 81715000 39848 2023;1687 15018 15423 62548 62548 YAPGDAVEK 9 1 0 Unmodified _YAPGDAVEK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 475.2349 2 475.234907 948.455261 87809.61 -0.18535 -8.8085E-05 0.57059 0.00027117 0.38524 0.00018308 475.235062057677 479.242241883487 23.028 0.43312 23.028 22.791 23.224 0 84 18 7 0 0 0 0.0019674 1 8926 78.516 60.192 1 0.88203 0.98593 0 100790000 57080000 43710000 39849 2023;1687 15018 15423 62549 62549 YAPGDAVEK 9 1 0 Unmodified _YAPGDAVEK_ 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 475.2351 2 475.234907 948.455261 86980.16 0.042789 2.0335E-05 -0.024052 -1.143E-05 0.018737 8.9043E-06 475.234893974912 479.241894774554 25.589 0.77051 25.589 25.198 25.968 -1.9073E-06 139 32 9 0 0 0 0.032638 1 9460 44.98 36.64 1 1.3758 1.1194 0 30486000 12591000 17895000 39850 2023;1687 15018 15423 62550 62550 YAPTEAQLNAVDALIDSMSLAK 22 1 0 Oxidation (M) _YAPTEAQLNAVDALIDSM(ox)SLAK_ YAPTEAQLNAVDALIDSM(1)SLAK YAPTEAQLNAVDALIDSM(92.77)SLAK 0 1 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1169.5869 2 1169.08577 2336.15698 56026.64 0.13905 0.00016256 0.19309 0.00022574 0.33214 0.0003883 1169.58714951945 1173.09327698873 122.49 0.5182 122.49 122.23 122.75 7.6294E-06 320 37 11 0 0 0 1.2653E-11 1 79182 92.773 92.773 1 0.48468 0.54747 0 81772000 56110000 25663000 39851 1476 15019 15424 62551 62551 1222 YAPTEAQLNAVDALIDSMSLAK 22 1 0 Oxidation (M) _YAPTEAQLNAVDALIDSM(ox)SLAK_ YAPTEAQLNAVDALIDSM(1)SLAK YAPTEAQLNAVDALIDSM(106.19)SLAK 0 1 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1169.5887 2 1169.08577 2336.15698 55494.11 0.27045 0.00031617 0.196 0.00022914 0.46645 0.00054532 1169.58702587508 1173.0931861009 122.03 0.57426 122.03 121.74 122.32 0 294 40 11 0 0 0 4.384E-16 2 80764 106.19 106.19 1 0.49982 0.55857 0 95544000 63654000 31891000 39852 1476 15019 15424 62552;62553 62553 1222 YAQAGFEGFK 10 1 0 Unmodified _YAQAGFEGFK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 563.2766 2 559.269281 1116.52401 81463.8 0.97703 0.00054642 0.66511 0.00037197 1.6421 0.0009184 559.269468331854 563.276784786127 59.488 0.52521 59.488 59.186 59.711 0 123 41 5 0 0 0 1.874E-08 2 33858 122.13 115.69 1 0.86016 0.96885 0 116260000 57598000 58657000 39853 1411 15020 15425 62554;62555 62555 YAQAGFEGFK 10 1 0 Unmodified _YAQAGFEGFK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.2769 2 559.269281 1116.52401 81110.89 0.75201 0.00042058 -0.076947 -4.3034E-05 0.67506 0.00037754 559.269029280195 563.2763463879 58.309 0.29135 58.309 58.171 58.463 0 73 18 5 0 0 0 5.1419E-10 2 33856 135.79 121.26 1 0.92943 1.0655 0 165780000 80417000 85359000 39854 1411 15020 15425 62556;62557 62557 YAQAGFEGFK 10 1 0 Unmodified _YAQAGFEGFK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.2775 2 559.269281 1116.52401 82065 0.41285 0.0002309 -0.0042875 -2.3979E-06 0.40857 0.0002285 559.269223225211 563.276686935781 69.118 0.61763 69.118 68.917 69.534 0 160 40 8 0 0 0 1.137E-05 1 36182 104.2 98.097 1 1.0247 0.82154 0 7470000 3678800 3791200 39855 1411 15020 15425 62558 62558 YAQAGFEGFK 10 1 0 Unmodified _YAQAGFEGFK_ 0 0 0 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 563.2766 2 559.269281 1116.52401 81708.5 0.56883 0.00031813 -0.23191 -0.0001297 0.33692 0.00018843 559.269043080218 563.276554861811 69.645 0.48981 69.645 69.401 69.89 0 147 33 6 0 0 0 0.0015966 2 35749 72.928 70.249 1 0.97757 0.79637 0 6728000 3415500 3312500 39856 1411 15020 15425 62559;62560 62560 YAQGFLPEK 9 1 0 Unmodified _YAQGFLPEK_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;P78365 B3KPJ4 B3KPJ4 PHC2;HPH2 Polyhomeotic-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.7816 2 526.7742 1051.53385 85328.95 0.4799 0.0002528 0.18559 9.7766E-05 0.6655 0.00035057 526.774186129776 530.781491724252 57.103 0.47948 57.103 56.886 57.365 -3.8147E-06 119 36 4 0 0 0 0.015114 1 32125 64.265 48.825 1 1.5377 1.53 0 9615000 4037700 5577300 39857 479 15021 15426 62561 62561 YAQGFLPEK 9 1 0 Unmodified _YAQGFLPEK_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;P78365 B3KPJ4 B3KPJ4 PHC2;HPH2 Polyhomeotic-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.7817 2 526.7742 1051.53385 84383.88 0.25311 0.00013333 0.37698 0.00019858 0.63008 0.00033191 526.774116840052 530.781428541799 56.082 0.49125 56.082 55.841 56.332 0 144 40 5 0 0 0 0.0020692 1 32179 88.819 74.043 1 1.4802 1.4795 0 15282000 7057400 8224100 39858 479 15021 15426 62562 62562 YAQGFLPEK 9 1 0 Unmodified _YAQGFLPEK_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;P78365 B3KPJ4 B3KPJ4 PHC2;HPH2 Polyhomeotic-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 530.7814 2 526.7742 1051.53385 84358 0.50473 0.00026588 0.14157 7.4574E-05 0.6463 0.00034045 526.774385610652 530.781159688293 66.061 0.54714 66.061 65.736 66.283 0 138 37 5 0 0 0 0.045465 1 34123 47.574 47.574 1 2.1654 1.765 0 2659700 927760 1732000 39859 479 15021 15426 62563 62563 YAQGFLPEK 9 1 0 Unmodified _YAQGFLPEK_ 0 0 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0;P78365 B3KPJ4 B3KPJ4 PHC2;HPH2 Polyhomeotic-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.7812 2 526.7742 1051.53385 84142.02 0.2978 0.00015688 0.087842 4.6273E-05 0.38565 0.00020315 526.77399186046 530.781140719298 66.449 0.67374 66.449 66.151 66.825 0 157 45 5 0 0 0 0.01622 2 33662 63.419 56.595 1 2.2985 1.8105 0 2287800 689470 1598300 39860 479 15021 15426 62564;62565 62564 YAQVTNNPENDGCINAVLLV 20 0 0 Unmodified _YAQVTNNPENDGCINAVLLV_ 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1103.0381 2 1102.53624 2203.05793 NaN NaN NaN -0.97608 -0.0010762 NaN NaN NaN NaN 125.08 0.60617 125.08 124.8 125.41 0 0 0 0 0.0048359 1 81286 41.052 35.019 1 39861 1427 15022 15427 62566 62566 YASETLQAQSEEAR 14 0 1 Unmodified _YASETLQAQSEEAR_ 0 0 0 Q9ULR0 Q9ULR0 Q9ULR0 ISY1 Pre-mRNA-splicing factor ISY1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 796.8774 2 791.870816 1581.72708 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.094 1 33.094 32.594 33.594 0 0 0 0 0.053671 1 16463 39.917 33.533 1 39862 2111 15023 15428 62567 62567 YASETLQAQSEEAR 14 0 1 Unmodified _YASETLQAQSEEAR_ 0 0 0 Q9ULR0 Q9ULR0 Q9ULR0 ISY1 Pre-mRNA-splicing factor ISY1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 797.376 2 791.870816 1581.72708 NaN NaN NaN 0.33191 0.00026283 NaN NaN NaN NaN 32.484 0.23763 32.484 32.373 32.611 0 0 0 0 0.00040675 1 16141 79.693 69.74 1 NaN NaN 0 2697500 0 2697500 39863 2111 15023 15428 62568 62568 YASETLQAQSEEAR 14 0 1 Unmodified _YASETLQAQSEEAR_ 0 0 0 Q9ULR0 Q9ULR0 Q9ULR0 ISY1 Pre-mRNA-splicing factor ISY1 homolog MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 791.8716 2 791.870816 1581.72708 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.46 1 32.46 31.96 32.96 0 0 0 0 1.5467E-10 1 16147 108.98 90.717 1 39864 2111 15023 15428 62569 62569 YASINAHLGIEQSR 14 0 1 Unmodified _YASINAHLGIEQSR_ 0 0 0 V9HW00;P48729;B4E1D9;Q05DL3;D6REM4;H0Y9X2;U3KQK7;B4DFH4;Q6PJ06;E7ETM0;B4DER9;Q8N752 V9HW00 V9HW00 HEL-S-77p;CSNK1A1;CSNK1A1L Casein kinase I isoform alpha;Casein kinase I isoform alpha-like MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 523.6072 3 520.270595 1557.78995 85123.59 0.33326 0.00017338 -0.29977 -0.00015596 0.033486 1.7422E-05 520.270567196171 523.606635983292 66.985 0.50663 66.985 66.78 67.286 0 123 34 6 0 0 0 0.00029408 1 34832 57.136 57.136 1 1.1991 1.0022 0 3451800 1482900 1968900 39865 1577 15024 15429 62570 62570 YASINTHLGIEQSR 14 0 1 Unmodified _YASINTHLGIEQSR_ 0 0 0 B4DIJ9;Q59FJ7;B4E0G1;A0A024R8X3;H7BYT1;P48730;J3QQI9;B0QY36;H0Y645;B0QY35;B0QY34;Q5U045;Q53EZ1;B3KRV2;P49674 B4DIJ9 B4DIJ9 CSNK1D;CSNK1E Casein kinase I isoform delta;Casein kinase I isoform epsilon MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.282 3 530.274116 1587.80052 85996.91 0.2166 0.00011486 0.02391 1.2679E-05 0.24051 0.00012753 530.27449393648 533.610004586482 55.31 0.38056 55.31 55.115 55.495 -3.8147E-06 95 26 6 0 0 0 0.027676 1 31650 35.037 26.308 1 0.67988 0.66867 0 13431000 7063600 6367100 39866 263 15025 15430 62571 62571 YASWAASQINR 11 0 1 Unmodified _YASWAASQINR_ 0 0 0 Q53HG5;A8K4K9;Q15006 Q53HG5 Q53HG5 EMC2 ER membrane protein complex subunit 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.316 2 633.814919 1265.61528 NaN NaN NaN 0.79383 0.00050314 NaN NaN NaN NaN 53.7 0.18313 53.7 53.609 53.793 0 0 0 0 0.046279 1 30069 45.368 25.039 1 NaN NaN 0 4517000 4517000 0 39867 736 15026 15431 62572 62572 YATGENTVFVDTK 13 1 0 Unmodified _YATGENTVFVDTK_ 0 0 0 B3KW33;B7Z4Q6;B1AKJ6;Q96SU4;Q9BRN2;A0A096LPC8 B3KW33 B3KW33 OSBPL9 Oxysterol-binding protein;Oxysterol-binding protein-related protein 9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.8579 2 722.851364 1443.68817 NaN NaN NaN 0.22944 0.00016585 NaN NaN NaN NaN 59.229 0.28255 59.229 59.123 59.406 0 0 0 0 7.0176E-06 1 33687 100.55 91.691 1 NaN NaN 0 6696400 0 6696400 39868 815 15027 15432 62573 62573 YATGENTVFVDTK 13 1 0 Unmodified _YATGENTVFVDTK_ 0 0 0 B3KW33;B7Z4Q6;B1AKJ6;Q96SU4;Q9BRN2;A0A096LPC8 B3KW33 B3KW33 OSBPL9 Oxysterol-binding protein;Oxysterol-binding protein-related protein 9 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.8514 2 722.851364 1443.68817 NaN NaN NaN -0.6022 -0.0004353 NaN NaN NaN NaN 59.285 0.070744 59.285 59.231 59.302 -3.8147E-06 0 0 0 0.0039427 1 33732 63.283 44.503 1 NaN NaN 0 1668200 1668200 0 39869 815 15027 15432 62574 62574 YATGENTVFVDTK 13 1 0 Unmodified _YATGENTVFVDTK_ 0 0 0 B3KW33;B7Z4Q6;B1AKJ6;Q96SU4;Q9BRN2;A0A096LPC8 B3KW33 B3KW33 OSBPL9 Oxysterol-binding protein;Oxysterol-binding protein-related protein 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.8593 2 722.851364 1443.68817 77948.77 0.70992 0.00051317 0.28103 0.00020314 0.99095 0.00071631 722.851003276692 726.858950981607 58.17 0.20144 58.17 58.056 58.257 -3.8147E-06 49 14 5 0 0 0 0.00013821 2 33753 89.403 85.321 1 3.1407 3.1931 0 12608000 2937900 9670100 39870 815 15027 15432 62575;62576 62576 YATLPNIMK 9 1 0 Oxidation (M) _YATLPNIM(ox)K_ YATLPNIM(1)K YATLPNIM(58.82)K 0 1 0 P38117;M0QY67 P38117 P38117 ETFB Electron transfer flavoprotein subunit beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 537.7911 2 533.78371 1065.55287 NaN NaN NaN -0.33024 -0.00017628 NaN NaN NaN NaN 58.303 0.18011 58.303 58.213 58.393 0 0 0 0 0.0062561 1 33863 58.815 45.818 1 NaN NaN 0 21923000 0 21923000 39871 1551 15028 15433 62577 62577 1307 YATSCYSCCPR 11 0 1 Unmodified _YATSCYSCCPR_ 0 0 0 Q13057;K7ES73;K7EN91;K7EPC2 Q13057 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.7772 2 712.773222 1423.53189 74334.84 0.83579 0.00059573 -0.58377 -0.0004161 0.25202 0.00017963 713.27432325238 717.776981912384 25.395 0.21055 25.395 25.28 25.49 1.9073E-06 21 8 5 0 0 0 0.015176 1 11063 46.462 46.462 1 1.4978 1.4902 0 7802600 2724400 5078200 39872 1704 15029 15434 62578 62578 YAVGEECDFEVGK 13 1 0 Unmodified _YAVGEECDFEVGK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 755.8338 2 751.827031 1501.63951 NaN NaN NaN -0.41332 -0.00031074 NaN NaN NaN NaN 68.008 0.67931 68.008 67.759 68.438 0 0 0 0 0.0057833 1 39244 56.404 49.715 1 NaN NaN 0 31229000 0 31229000 39873 2103 15030 15435 62579 62579 YAVGEECDFEVGK 13 1 0 Unmodified _YAVGEECDFEVGK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 755.8344 2 751.827031 1501.63951 NaN NaN NaN -0.79566 -0.0005982 NaN NaN NaN NaN 67.067 0.72369 67.067 66.701 67.425 0 0 0 0 2.6453E-09 1 39520 114.83 108.14 1 NaN NaN 0 29458000 0 29458000 39874 2103 15030 15435 62580 62580 YAVGEECDFEVGK 13 1 0 Unmodified _YAVGEECDFEVGK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 755.8339 2 751.827031 1501.63951 NaN NaN NaN -0.62121 -0.00046704 NaN NaN NaN NaN 78.136 1.0907 78.136 77.792 78.883 0 0 0 0 6.0279E-09 1 41791 110.39 102.46 1 NaN NaN 0 19846000 0 19846000 39875 2103 15030 15435 62581 62581 YAVGEECDFEVGK 13 1 0 Unmodified _YAVGEECDFEVGK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 755.8341 2 751.827031 1501.63951 69857.68 0.54007 0.00040604 -0.37777 -0.00028402 0.1623 0.00012202 752.328590326513 755.83411689567 78.559 1.0772 78.559 78.199 79.276 0 247 68 7 0 0 0 0.00013248 1 41224 73.781 72.742 1 53.2 42.668 0 21978000 468380 21509000 39876 2103 15030 15435 62582 62582 YAVLYQPLFDK 11 1 0 Unmodified _YAVLYQPLFDK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.8645 2 678.863546 1355.71254 72147.68 0.63884 0.00043369 -1.0542 -0.00071568 -0.41539 -0.00028199 678.862041003688 682.870486435401 105.82 1.2421 105.82 105.34 106.58 0 502 91 9 0 0 0 0.00024966 2 65337 105.4 86.125 1 0.9905 1.1299 0 176130000 90343000 85783000 39877 332 15031 15436 62583;62584 62583 YAVLYQPLFDK 11 1 0 Unmodified _YAVLYQPLFDK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 682.871 2 678.863546 1355.71254 72699.82 0.74431 0.00050528 -0.31285 -0.00021238 0.43146 0.0002929 678.863509976282 682.86937121727 105.04 1.2126 105.04 104.59 105.81 0 513 91 10 0 0 0 0.00027852 3 66417 103.7 84.429 1 0.99865 1.1663 0 276250000 136440000 139810000 39878 332 15031 15436 62585;62586;62587 62586 YAVLYQPLFDK 11 1 0 Unmodified _YAVLYQPLFDK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 678.8635 2 678.863546 1355.71254 73925.62 0.46132 0.00031317 0.062321 4.2308E-05 0.52364 0.00035548 678.863601151977 682.87044811229 117.06 1.2532 117.06 116.69 117.95 0 274 53 10 0 0 0 0.0003514 2 68777 96.89 77.619 1 1.4811 1.278 0 102720000 40070000 62652000 39879 332 15031 15436 62588;62589 62589 YAVLYQPLFDK 11 1 0 Unmodified _YAVLYQPLFDK_ 0 0 0 F8VY35;F5H4R6;H0YIV4;A0A024RBB7;P55209;F8W020;F8W118;F8VXI6;F8VUX1;F8VV59;A0A024RBE6;F8W0J6;B7Z2V4;H0YH88;H0YHC3;F8W543;B7Z9C2;F8VRJ2;B7Z5H0;F8VVB5 F8VY35 F8VY35 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.3724 2 678.863546 1355.71254 73905.63 0.71946 0.00048842 0.037872 2.571E-05 0.75733 0.00051413 678.863573811009 682.870530174514 116.85 0.92979 116.85 116.53 117.46 0 278 42 10 0 0 0 0.00047367 2 67647 86.624 67.353 1 1.4999 1.2794 0 95883000 39398000 56485000 39880 332 15031 15436 62590;62591 62590 YAVNVALQK 9 1 0 Unmodified _YAVNVALQK_ 0 0 0 B7ZMF2;Q9NVI1 B7ZMF2 B7ZMF2 FANCI Fanconi anemia group I protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 507.2967 2 503.290017 1004.56548 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.039 1 55.039 54.539 55.539 0 0 0 0 0.029533 1 31506 53.166 24.654 1 39881 1116 15032 15437 62592 62592 YAVPSAGLR 9 0 1 Unmodified _YAVPSAGLR_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.2613 2 467.261259 932.507966 86820.89 0.06379 2.9806E-05 -0.7135 -0.00033339 -0.64971 -0.00030358 467.261024613471 472.264917719747 51.76 0.84584 51.76 51.268 52.114 0 237 66 5 0 0 0 0.038591 1 29405 42.599 29.02 1 0.76379 0.88782 0 59700000 33049000 26651000 39882 1665 15033 15438 62593 62593 YAWQGVALLPFVDER 15 0 1 Unmodified _YAWQGVALLPFVDER_ 0 0 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 887.9664 2 882.459404 1762.90426 66063.49 0.64332 0.00056771 -0.24216 -0.0002137 0.40116 0.00035401 882.459746979077 887.964727357188 129.6 0.34378 129.6 129.36 129.7 0 48 19 4 0 0 0 0.00053322 1 86546 55.452 46.707 1 0.87887 0.93598 0 3662900 1927800 1735100 39883 903 15034 15439 62594 62594 YAYYDTER 8 0 1 Unmodified _YAYYDTER_ 0 0 0 B4DMT5;B3KSH1;O00303;B4DEW9 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.7361 2 540.735271 1079.45599 87369.89 0.60564 0.00032749 -0.036222 -1.9586E-05 0.56942 0.0003079 540.735308564192 545.739296229309 30.86 0.44149 30.86 30.618 31.06 0 83 39 4 0 0 0 0.030566 1 15135 51.854 46.866 1 1.0057 1.0358 0 6303800 3184800 3119000 39884 939 15035 15440 62595 62595 YAYYDTER 8 0 1 Unmodified _YAYYDTER_ 0 0 0 B4DMT5;B3KSH1;O00303;B4DEW9 B4DMT5 B4DMT5 EIF3F Eukaryotic translation initiation factor 3 subunit F MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.7349 2 540.735271 1079.45599 83756.23 0.28108 0.00015199 0.31068 0.000168 0.59177 0.00031999 540.735306422722 545.739529928472 30.261 0.45764 30.261 30 30.458 1.9073E-06 110 37 5 0 0 0 0.027047 1 14818 54.157 46.217 1 1.3326 1.3105 0 13439000 6344600 7094600 39885 939 15035 15440 62596 62596 YCHDLGER 8 0 1 Unmodified _YCHDLGER_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 350.4872 3 350.487153 1048.43963 101518.8 0.21189 7.4263E-05 -0.061633 -2.1602E-05 0.15025 5.2662E-05 350.487061154932 353.823102989166 17.632 0.27273 17.632 17.535 17.808 0 34 9 5 0 0 0 0.018936 1 4762 39.547 27.311 1 0.9437 0.98973 0 12179000 6283800 5894800 39886 1997 15036 15441 62597 62597 YCHDLGER 8 0 1 Unmodified _YCHDLGER_ 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.2273 2 525.227091 1048.43963 83169.19 0.41992 0.00022056 0.096559 5.0715E-05 0.51648 0.00027127 525.227060094072 530.231266586584 17.623 0.24462 17.623 17.535 17.78 0 32 8 6 0 0 0 0.039422 1 4764 52.716 44.376 1 0.86098 0.87605 0 7203800 3978400 3225400 39887 1997 15036 15441 62598 62598 YCIFANFSVTGGK 13 1 0 Unmodified _YCIFANFSVTGGK_ 0 0 0 P61964;Q86VZ2 P61964 P61964 WDR5;WDR5B WD repeat-containing protein 5;WD repeat-containing protein 5B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 732.3547 2 732.353019 1462.69149 71114.03 0.87018 0.00063728 0.44551 0.00032627 1.3157 0.00096355 732.854393345981 736.360565361706 117.76 0.48869 117.76 117.53 118.02 0 86 21 5 0 0 0 0.016957 1 69446 36.417 33.904 1 1.8252 1.443 0 5137900 1865200 3272700 39888 1630 15037 15442 62599 62599 YCLPFLQPGR 10 0 1 Unmodified _YCLPFLQPGR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.8257 2 625.821158 1249.62776 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.91 1 106.91 106.41 107.41 0 0 0 0 0.0075927 1 66492 60.682 40.895 1 39889 1563 15038 15443 62600 62600 YCLPFLQPGR 10 0 1 Unmodified _YCLPFLQPGR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 630.8253 2 625.821158 1249.62776 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.02 1 107.02 106.52 107.52 -7.6294E-06 0 0 0 0.025623 1 66581 51.995 39.369 1 39890 1563 15038 15443 62601 62601 YCLPFLQPGR 10 0 1 Unmodified _YCLPFLQPGR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8259 2 625.821158 1249.62776 79972.77 0.77663 0.00048603 -0.10727 -6.7131E-05 0.66936 0.0004189 625.820979851029 630.825397186897 106.15 0.49349 106.15 105.96 106.45 0 130 37 5 0 0 0 0.0026805 2 67648 67.981 61.81 1 0.74051 0.73817 0 8937900 5819900 3118000 39891 1563 15038 15443 62602;62603 62603 YCLPFLQPGR 10 0 1 Unmodified _YCLPFLQPGR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 625.8212 2 625.821158 1249.62776 77044.32 0.81635 0.00051089 0.41548 0.00026001 1.2318 0.0007709 625.820947434496 630.825352807894 118.2 0.74274 118.2 117.92 118.67 0 98 30 7 0 0 0 0.027498 1 69759 43.808 43.808 1 0.82969 0.69372 0 3661300 2095100 1566200 39892 1563 15038 15443 62604 62604 YCLPFLQPGR 10 0 1 Unmodified _YCLPFLQPGR_ 0 0 0 P42285;A8K6I4;B4E3M6 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.8256 2 625.821158 1249.62776 78458.77 0.5392 0.00033744 0.21545 0.00013483 0.75466 0.00047228 625.821060094849 630.825253296218 117.97 0.65079 117.97 117.71 118.36 0 101 29 5 0 0 0 0.027498 2 68647 43.808 43.808 1 0.90376 0.79931 0 4049500 1943400 2106100 39893 1563 15038 15443 62605;62606 62605 YCNSLPDIPFDPK 13 1 0 Unmodified _YCNSLPDIPFDPK_ 0 0 0 A0A024R0H6;Q8N7H5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.3686 2 783.368866 1564.72318 NaN NaN NaN 0.14634 0.00011464 NaN NaN NaN NaN 104.17 0.35614 104.17 103.94 104.29 7.6294E-06 0 0 0 0.038429 1 65961 41.54 35.156 1 NaN NaN 0 4404900 4404900 0 39894 46 15039 15444 62607 62607 YCYLQNEVFGLFQK 14 1 0 Unmodified _YCYLQNEVFGLFQK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 905.4412 2 904.937447 1807.86034 66909.66 1.0739 0.00097185 -0.38095 -0.00034474 0.69299 0.00062711 905.438377790026 908.944216901309 121.62 0.42343 121.62 121.4 121.82 7.6294E-06 101 27 5 0 0 0 5.8075E-05 1 78649 91.855 91.855 1 0.43435 0.43805 0 7088200 4870900 2217300 39895 1486 15040 15445 62608 62608 YCYLQNEVFGLFQK 14 1 0 Unmodified _YCYLQNEVFGLFQK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.938 2 904.937447 1807.86034 68163.59 0.79787 0.00072202 -0.118 -0.00010678 0.67988 0.00061524 904.937146503818 908.945048942879 121.11 0.37072 121.11 120.92 121.29 0 88 21 6 0 0 0 0.00018126 1 80234 72.006 69.704 1 0.42466 0.43526 0 9423900 6837900 2586000 39896 1486 15040 15445 62609 62609 YCYYNETHK 9 1 0 Unmodified _YCYYNETHK_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.2662 2 639.266413 1276.51827 76709.52 0.43272 0.00027662 -0.26647 -0.00017035 0.16624 0.00010627 639.266015736395 643.273364278294 20.49 0.25675 20.49 20.371 20.627 0 43 11 6 0 0 0 0.009864 2 6907 59.8 59.8 1 0.89986 0.89011 0 9433900 5877100 3556800 39897 2023;1687 15041 15446 62610;62611 62610 YCYYNETHK 9 1 0 Unmodified _YCYYNETHK_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.5136 3 426.513367 1276.51827 92585.02 -0.41417 -0.00017665 0.99179 0.00042301 0.57762 0.00024636 426.513762028791 429.185215966594 20.336 0.26048 20.336 20.224 20.485 -1.9073E-06 39 8 7 0 0 0 0.00064672 1 6633 63.534 61.653 1 0.95833 1.0055 0 19555000 9308900 10246000 39898 2023;1687 15041 15446 62612 62612 YCYYNETHK 9 1 0 Unmodified _YCYYNETHK_ 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.2751 2 639.266413 1276.51827 75610.2 0.27252 0.00017421 1.0672 0.00068223 1.3397 0.00085644 639.267072969799 643.274223025225 20.337 0.22584 20.337 20.224 20.45 0 33 7 6 0 0 0 0.0018938 2 6656 79.474 78.091 1 0.88103 0.95671 0 22301000 11731000 10569000 39899 2023;1687 15041 15446 62613;62614 62614 YDAFGEDSSSAMGVENR 17 0 1 Oxidation (M) _YDAFGEDSSSAM(ox)GVENR_ YDAFGEDSSSAM(1)GVENR YDAFGEDSSSAM(69.34)GVENR 0 1 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 931.3842 2 925.878512 1849.74247 62468.57 0.58374 0.00054047 -0.32542 -0.0003013 0.25832 0.00023917 925.878275016711 930.882589720818 50.559 0.88545 50.559 50.194 51.08 3.8147E-06 549 82 10 0 0 0 3.4376E-05 1 27729 69.345 66.832 1 1.0019 1.1809 0 241260000 120190000 121070000 39900 2129 15042 15447 62615 62615 1963 YDAFGEDSSSAMGVENR 17 0 1 Oxidation (M) _YDAFGEDSSSAM(ox)GVENR_ YDAFGEDSSSAM(1)GVENR YDAFGEDSSSAM(57.43)GVENR 0 1 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 925.8802 2 925.878512 1849.74247 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.229 1 50.229 49.729 50.729 3.8147E-06 0 0 0 0.00026652 1 27710 57.434 56.951 1 39901 2129 15042 15447 62616 62616 1963 YDAFGEDSSSAMGVENR 17 0 1 Oxidation (M) _YDAFGEDSSSAM(ox)GVENR_ YDAFGEDSSSAM(1)GVENR YDAFGEDSSSAM(82.07)GVENR 0 1 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.8799 2 925.878512 1849.74247 62804.46 0.43951 0.00040694 -0.16171 -0.00014972 0.2778 0.00025721 925.878447646387 930.882780074957 49.445 0.77106 49.445 49.155 49.926 0 496 65 11 0 0 0 1.3667E-05 2 27661 82.069 81.164 1 0.99057 1.1449 0 258410000 129570000 128840000 39902 2129 15042 15447 62617;62618 62618 1963 YDAFGEDSSSAMGVENR 17 0 1 Oxidation (M) _YDAFGEDSSSAM(ox)GVENR_ YDAFGEDSSSAM(1)GVENR YDAFGEDSSSAM(43.76)GVENR 0 1 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.8768 2 925.878512 1849.74247 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.007 1 50.007 49.507 50.507 3.8147E-06 0 0 0 0.0068274 1 28205 43.761 43.761 1 39903 2129 15042 15447 62619 62619 1963 YDAFGEDSSSAMGVENR 17 0 1 Oxidation (M) _YDAFGEDSSSAM(ox)GVENR_ YDAFGEDSSSAM(1)GVENR YDAFGEDSSSAM(46.48)GVENR 0 1 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 926.3796 2 925.878512 1849.74247 62183.91 0.51186 0.00047392 -0.20868 -0.00019322 0.30317 0.0002807 925.878487156913 930.882620578959 58.738 1.1389 58.738 58.298 59.437 -3.8147E-06 642 87 11 0 0 0 0.00030852 1 30138 46.481 46.481 1 0.67472 0.57788 0 40686000 24467000 16218000 39904 2129 15042 15447 62620 62620 1963 YDAFGEDSSSAMGVENR 17 0 1 Oxidation (M) _YDAFGEDSSSAM(ox)GVENR_ YDAFGEDSSSAM(1)GVENR YDAFGEDSSSAM(41.23)GVENR 0 1 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 925.8786 2 925.878512 1849.74247 63687.65 0.43144 0.00039946 -0.12801 -0.00011852 0.30343 0.00028094 925.87803042289 930.88263777234 78.762 0.5251 78.762 78.506 79.031 0 191 35 8 0 0 0 0.00067035 1 41500 41.227 41.227 1 1.137 0.9707 0 3231700 1519900 1711800 39905 2129 15042 15447 62621 62621 1963 YDAFGEDSSSAMGVENR 17 0 1 Unmodified _YDAFGEDSSSAMGVENR_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 917.882 2 917.881055 1833.74756 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.337 1 68.337 67.837 68.837 0 0 0 0 0.00036443 1 39600 70.622 66.767 1 39906 2129 15042 15448 62622 62622 YDAFGEDSSSAMGVENR 17 0 1 Unmodified _YDAFGEDSSSAMGVENR_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 917.8804 2 917.881055 1833.74756 NaN NaN NaN 0.035933 3.2982E-05 NaN NaN NaN NaN 67.391 0.21416 67.391 67.282 67.496 0 0 0 0 9.5882E-05 1 39939 69.345 63.373 1 NaN NaN 0 2678900 2678900 0 39907 2129 15042 15448 62623 62623 YDAFGEDSSSAMGVENR 17 0 1 Unmodified _YDAFGEDSSSAMGVENR_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 917.8808 2 917.881055 1833.74756 63431.68 0.45748 0.00041991 -0.02763 -2.5361E-05 0.42985 0.00039455 917.881147087259 922.88536441383 78.33 0.77089 78.33 78.009 78.78 0 358 50 11 0 0 0 9.6459E-05 1 41938 60.401 60.401 1 1.1195 0.91945 0 17349000 8156500 9192800 39908 2129 15042 15448 62624 62624 YDAFGEDSSSAMGVENR 17 0 1 Unmodified _YDAFGEDSSSAMGVENR_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 922.8851 2 917.881055 1833.74756 63209.02 0.40402 0.00037084 -0.15157 -0.00013912 0.25245 0.00023172 917.881111831631 922.885230759689 78.783 0.6885 78.783 78.46 79.149 0 361 45 11 0 0 0 0.00016797 2 41377 53.001 53.001 1 1.1275 0.94275 0 16329000 7911700 8417100 39909 2129 15042 15448 62625;62626 62626 YDAFLASESLIK 12 1 0 Unmodified _YDAFLASESLIK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 682.8618 2 678.855918 1355.69728 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.15 1 106.15 105.65 106.65 0 0 0 0 1.1862E-06 1 65877 99.283 75.963 1 39910 1651 15043 15449 62627 62627 YDAFLASESLIK 12 1 0 Unmodified _YDAFLASESLIK_ 0 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.8577 2 678.855918 1355.69728 71191.81 0.60852 0.0004131 -0.319 -0.00021655 0.28953 0.00019655 678.855810200602 683.364423632204 105.53 0.66955 105.53 105.27 105.94 0 206 46 7 0 0 0 0.00013325 1 66897 93.843 73.539 1 0.84542 0.93949 0 50360000 32830000 17530000 39911 1651 15043 15449 62628 62628 YDAGEHGLQEAEK 13 1 0 Unmodified _YDAGEHGLQEAEK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5;F5H2X1;B7Z842 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 723.8293 2 723.82842 1445.64229 70723.59 0.50258 0.00036378 1.4945 0.0010818 1.9971 0.0014456 723.829260980293 728.338665838297 23.547 0.54394 23.547 23.184 23.728 0 116 25 9 0 0 0 3.8325E-31 2 9418 174.9 150.81 1 1.5209 1.6738 0 54951000 31500000 23451000 39912 1954 15044 15450 62629;62630 62629 YDAGEHGLQEAEK 13 1 0 Unmodified _YDAGEHGLQEAEK_ 0 0 0 Q93009;B7ZAX6;Q6U8A4;B7Z855;H3BND8;B7Z7T5;F5H2X1;B7Z842 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.8361 2 723.82842 1445.64229 71664.05 0.37727 0.00027308 1.2138 0.00087855 1.591 0.0011516 723.829304502879 727.835670469338 23.258 0.45363 23.258 22.91 23.363 0 67 18 5 0 0 0 6.1311E-19 1 9113 145.29 126.55 1 0.52818 0.54292 0 32260000 23883000 8377200 39913 1954 15044 15450 62631 62631 YDDAIQLYDR 10 0 1 Unmodified _YDDAIQLYDR_ 0 0 0 Q53HG5;A8K4K9;Q15006;H0YAS9 Q53HG5 Q53HG5 EMC2 ER membrane protein complex subunit 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 636.2993 2 636.298767 1270.58298 80641.7 0.36058 0.00022944 0.7101 0.00045183 1.0707 0.00068127 636.299488020837 641.303094734168 80.235 0.34594 80.235 79.996 80.342 0 55 21 5 0 0 0 0.035186 1 43353 40.715 33.335 1 0.78282 0.67972 0 2331900 1170400 1161500 39914 736 15045 15451 62632 62632 YDDYPENGVVQMNSR 15 0 1 Oxidation (M) _YDDYPENGVVQM(ox)NSR_ YDDYPENGVVQM(1)NSR YDDYPENGVVQM(54.47)NSR 0 1 0 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 902.3901 2 901.88614 1801.75773 NaN NaN NaN -0.56179 -0.00050667 NaN NaN NaN NaN 46.144 0.15376 46.144 46.095 46.248 0 0 0 0 0.0019103 1 24885 54.471 48.368 1 NaN NaN 0 2278000 2278000 0 39915 406 15046 15452 62633 62633 296 YDEIFYNLAPADGK 14 1 0 Unmodified _YDEIFYNLAPADGK_ 0 0 0 A0A024R0S6;Q9NZN4;B3KUH4;B4DU62;B7ZAY3 A0A024R0S6 A0A024R0S6 EHD2 EH domain-containing protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 812.3937 2 808.385571 1614.75659 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.42 1 100.42 99.916 100.92 7.6294E-06 0 0 0 0.030429 1 63076 43.084 36.231 1 39916 57 15047 15453 62634 62634 YDFDSSEVLQGLDFFGNK 18 1 0 Unmodified _YDFDSSEVLQGLDFFGNK_ 0 0 0 Q9Y2R4;Q59H21;A0A087X1P7;A0A087WTD6;A0A087X069 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1040.9792 2 1040.97855 2079.94255 63277.11 0.7469 0.00077751 0.17037 0.00017735 0.91727 0.00095486 1040.97848338352 1044.98622220205 132.25 0.37352 132.25 132.07 132.44 1.5259E-05 87 22 6 0 0 0 4.9841E-05 1 88524 58.098 54.97 1 0.99792 0.98987 0 6023100 2830800 3192300 39917 2126 15048 15454 62635 62635 YDGIILPGK 9 1 0 Unmodified _YDGIILPGK_ 0 0 0 Q08ES8;Q5VVD0;P62913 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.2795 2 488.279118 974.543683 86777.44 0.26734 0.00013054 0.25123 0.00012267 0.51858 0.00025321 488.279335452548 492.286150451299 76.006 2.4102 76.006 75.038 77.448 7.6294E-06 905 204 9 0 0 0 0.00063538 4 44810 96.492 74.361 1 0.96806 1.1614 0 1033900000 523260000 510630000 39918 1652 15049 15455 62636;62637;62638;62639 62638 YDGIILPGK 9 1 0 Unmodified _YDGIILPGK_ 0 0 0 Q08ES8;Q5VVD0;P62913 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.2797 2 488.279118 974.543683 86955.94 0.20604 0.0001006 -0.062921 -3.0723E-05 0.14312 6.9881E-05 488.279201306368 492.286016221223 74.817 2.4823 74.817 73.645 76.127 0 983 218 10 0 0 0 1.8894E-05 5 45232 119.17 98.619 1 0.96478 1.1395 0 1179200000 575920000 603330000 39919 1652 15049 15455 62640;62641;62642;62643;62644 62643 YDGIILPGK 9 1 0 Unmodified _YDGIILPGK_ 0 0 0 Q08ES8;Q5VVD0;P62913 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.2863 2 488.279118 974.543683 86021.69 0.15946 7.786E-05 0.1374 6.7092E-05 0.29686 0.00014495 488.279190949001 492.286153905161 86.329 2.0515 86.329 85.768 87.82 0 572 129 9 0 0 0 0.0064086 2 47580 64.265 58.028 1 1.1423 0.97712 0 70283000 31527000 38756000 39920 1652 15049 15455 62645;62646 62646 YDGIILPGK 9 1 0 Unmodified _YDGIILPGK_ 0 0 0 Q08ES8;Q5VVD0;P62913 Q08ES8 Q08ES8 RPL11 60S ribosomal protein L11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 488.2786 2 488.279118 974.543683 86257.79 0.26502 0.0001294 -0.042742 -2.087E-05 0.22227 0.00010853 488.279076084037 492.28607289307 86.429 1.8548 86.429 85.808 87.663 0 489 110 9 0 0 0 0.0028606 3 46455 73.26 62.846 1 1.102 0.93371 0 62375000 28851000 33524000 39921 1652 15049 15455 62647;62648;62649 62648 YDLHQVK 7 1 0 Unmodified _YDLHQVK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 455.7472 2 451.74016 901.465767 NaN NaN NaN -0.35743 -0.00016147 NaN NaN NaN NaN 23.654 0.49256 23.654 23.443 23.936 0 0 0 0 0.030912 1 9513 68.312 39.414 1 NaN NaN 0 27006000 0 27006000 39922 1997 15050 15456 62650 62650 YDLHQVK 7 1 0 Unmodified _YDLHQVK_ 0 0 0 Q9BQG0;I3L1L3;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 455.7471 2 451.74016 901.465767 88816.61 -0.13421 -6.0629E-05 0.28984 0.00013093 0.15563 7.0303E-05 451.740317914109 455.747094050048 23.279 0.36623 23.279 23.084 23.45 0 70 16 6 0 0 0 0.011817 1 9152 107.32 61.302 1 0.89836 1.0075 0 78406000 42026000 36379000 39923 1997 15050 15456 62651 62651 YDNLITPVVDSLK 13 1 0 Unmodified _YDNLITPVVDSLK_ 0 0 0 Q8NI27;A0A0C4DG98;B4DKZ6 Q8NI27 Q8NI27 THOC2 THO complex subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.9023 2 738.900857 1475.78716 73633.7 0.81528 0.00060241 0.63822 0.00047158 1.4535 0.001074 739.401541499631 742.909754291303 112.72 0.42557 112.72 112.57 113 0 87 28 6 0 0 0 0.040464 1 73050 36.954 32.936 1 1.2391 1.2925 0 10061000 4062200 5999200 39924 1929 15051 15457 62652 62652 YDPPLEDGAMPSAR 14 0 1 Oxidation (M) _YDPPLEDGAM(ox)PSAR_ YDPPLEDGAM(1)PSAR YDPPLEDGAM(44.61)PSAR 0 1 0 B1AK87;B1AK85;B2R7T8;B1AK88;B4DWA6;P47756 B1AK87 B1AK87 CAPZB F-actin-capping protein subunit beta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 767.8433 2 767.845755 1533.67696 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.121 1 50.121 49.621 50.621 0 0 0 0 0.0088141 1 28297 44.612 38.079 1 39925 814 15052 15458 62653 62653 650 YDPSLTFSENVDLTEPIISR 20 0 1 Unmodified _YDPSLTFSENVDLTEPIISR_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1154.0802 2 1148.57081 2295.12706 56144.14 0.24021 0.00027589 0.21662 0.0002488 0.45682 0.00052469 1149.07106496399 1153.57458180043 120.1 0.33683 120.1 119.94 120.28 -7.6294E-06 70 24 5 0 0 0 1.3974E-06 3 77401 74.678 74.678 1 2.1375 2.2395 0 10925000 4654800 6270300 39926 955 15053 15459 62654;62655;62656 62655 YDPSLTFSENVDLTEPIISR 20 0 1 Unmodified _YDPSLTFSENVDLTEPIISR_ 0 0 0 B4DSV5;B3KXZ4;H0Y8E6;P49736;Q9BWF4 B4DSV5 B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1154.0762 2 1148.57081 2295.12706 56768.88 0.34338 0.0003944 -0.26889 -0.00030884 0.074488 8.5554E-05 1149.57439739757 1154.07637133794 119.69 0.3354 119.69 119.51 119.85 0 92 24 6 0 0 0 3.0741E-06 1 78944 62.377 62.377 1 2.1867 2.16 0 12692000 4235600 8456600 39927 955 15053 15459 62657 62657 YDPTIEDFYR 10 0 1 Unmodified _YDPTIEDFYR_ 0 0 0 Q9Y3L5;F6U784;Q5JQ44;P61225;P10114 Q9Y3L5 Q9Y3L5 RAP2C;RAP2A;DKFZp547A0616;RAP2B Ras-related protein Rap-2c;Ras-related protein Rap-2b;Ras-related protein Rap-2a MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.8053 2 659.801143 1317.58773 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.7 1 88.7 88.2 89.2 0 0 0 0 0.045382 1 53483 45.161 34.93 1 39928 2138 15054 15460 62658 62658 YDPTIEDSYR 10 0 1 Unmodified _YDPTIEDSYR_ 0 0 0 A0A024RB87;P61224;F5H6R7;F5H004;F5GX62;Q9BXV4;E7ESV4;F5H7Y6;Q5U0C3;A8KAH9;P62834;F5H4H0;F5GYH7;F5H077;F5GWU8;F5H491;F5H0B7;F5H500;A0A075B6Q0;F5GYB5;A0A0J9YXB3;A6NIZ1 A0A024RB87 A0A024RB87 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A;Ras-related protein Rap-1b-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.788 2 629.78295 1257.55135 77569.37 1.0039 0.00063223 -0.40335 -0.00025402 0.60054 0.00037821 629.782790841468 634.787149844874 49.769 0.44802 49.769 49.555 50.003 0 129 36 5 0 0 0 0.00038819 1 28018 87.913 84.754 1 1.8339 1.8069 0 14626000 5278000 9348500 39929 329 15055 15461 62659 62659 YDPTIEDSYRK 11 1 1 Unmodified _YDPTIEDSYRK_ 0 0 1 A0A024RB87;P61224;F5H6R7;F5H004;F5GX62;Q9BXV4;E7ESV4;F5H7Y6;Q5U0C3;A8KAH9;P62834;F5H4H0;F5GYH7;F5H077;F5GWU8;F5H491;F5H0B7;F5H500;A0A075B6Q0;F5GYB5 A0A024RB87 A0A024RB87 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 702.842 2 693.830431 1385.64631 73992.34 0.43501 0.00030183 0.50673 0.00035158 0.94174 0.00065341 694.33245052076 702.842037480016 34.525 0.29985 34.525 34.388 34.688 0 65 22 5 0 0 0 0.0018407 2 17329 70.1 66.961 1 2.002 2.2002 0 17621000 5690600 11931000 39930 329 15056 15462 62660;62661 62660 YDPTIEDSYRK 11 1 1 Unmodified _YDPTIEDSYRK_ 0 0 1 A0A024RB87;P61224;F5H6R7;F5H004;F5GX62;Q9BXV4;E7ESV4;F5H7Y6;Q5U0C3;A8KAH9;P62834;F5H4H0;F5GYH7;F5H077;F5GWU8;F5H491;F5H0B7;F5H500;A0A075B6Q0;F5GYB5 A0A024RB87 A0A024RB87 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.8306 2 693.830431 1385.64631 75179.5 0.62351 0.00043261 0.088482 6.1392E-05 0.712 0.000494 693.830556535098 702.841670102953 33.719 0.38239 33.719 33.511 33.893 0 98 29 5 0 0 0 0.035774 1 17018 43.308 43.308 1 1.8831 2.1249 0 14703000 6183500 8519400 39931 329 15056 15462 62662 62662 YDPVWMTVTR 10 0 1 Oxidation (M) _YDPVWM(ox)TVTR_ YDPVWM(1)TVTR YDPVWM(46.46)TVTR 0 1 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPJ1;D2CPJ3;D2CPJ4;D2CPJ5;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 642.3083 2 642.308081 1282.60161 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.623 1 77.623 77.123 78.123 0 0 0 0 0.019087 1 45869 46.462 23.722 1 39932 118;1184 15057 15463 62663 62663 101 YDSLLEQGLVEAALVSK 17 1 0 Unmodified _YDSLLEQGLVEAALVSK_ 0 0 0 O96028;Q05CW4;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.5019 2 917.993474 1833.97239 63391.19 0.77802 0.00071422 0.37467 0.00034395 1.1527 0.0010582 918.495725705123 922.50173872669 126.02 0.51118 126.02 125.74 126.25 0 230 37 8 0 0 0 1.9854E-08 3 81963 99.941 99.941 1 0.91152 0.89346 0 20920000 11310000 9609600 39933 1435 15058 15464 62664;62665;62666 62666 YDSLLEQGLVEAALVSK 17 1 0 Unmodified _YDSLLEQGLVEAALVSK_ 0 0 0 O96028;Q05CW4;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 918.4952 2 917.993474 1833.97239 62414.58 0.86013 0.00078959 0.17588 0.00016145 1.036 0.00095105 917.993921269721 921.999757992578 125.61 0.52834 125.61 125.35 125.88 0 202 35 8 0 0 0 3.2734E-18 2 83662 133.15 127.31 1 0.97538 1.0586 0 22355000 11039000 11316000 39934 1435 15058 15464 62667;62668 62667 YDTALNLLK 9 1 0 Unmodified _YDTALNLLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 529.803 2 525.795132 1049.57571 NaN NaN NaN 0.38505 0.00020246 NaN NaN NaN NaN 88.493 1.1413 88.493 87.849 88.99 0 0 0 0 0.00014023 2 53012 96.492 70.598 1 NaN NaN 0 35047000 0 35047000 39935 486 15059 15465 62669;62670 62669 YDTALNLLK 9 1 0 Unmodified _YDTALNLLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.8037 2 525.795132 1049.57571 84078.11 0.34756 0.00018275 0.1365 7.1773E-05 0.48406 0.00025452 525.795066836386 529.802444310746 87.619 0.95657 87.619 86.915 87.871 0 283 76 7 0 0 0 0.00034507 1 54053 101.33 70.024 1 0.91945 1.0288 0 84476000 41521000 42955000 39936 486 15059 15465 62671 62671 YDTALNLLK 9 1 0 Unmodified _YDTALNLLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.8036 2 525.795132 1049.57571 NaN NaN NaN 0.15959 8.3914E-05 NaN NaN NaN NaN 87.223 0.58101 87.223 86.675 87.256 -7.6294E-06 0 0 0 0.0019738 1 53573 83.206 55.681 1 NaN NaN 0 12902000 0 12902000 39937 486 15059 15465 62672 62672 YDTALNLLK 9 1 0 Unmodified _YDTALNLLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.8025 2 525.795132 1049.57571 84182.59 0.16348 8.5958E-05 0.12648 6.6503E-05 0.28996 0.00015246 525.795083043223 529.802408699766 101.18 1.3813 101.18 100.3 101.68 0 409 98 6 0 0 0 0.003784 2 57259 70.919 49.619 1 1.4118 1.1138 0 10788000 4643700 6144100 39938 486 15059 15465 62673;62674 62674 YDTALNLLK 9 1 0 Unmodified _YDTALNLLK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.8021 2 525.795132 1049.57571 84153.53 0.28841 0.00015165 0.068147 3.5831E-05 0.35656 0.00018748 525.795041470323 529.802333589148 100.94 1.4078 100.94 100.11 101.51 7.6294E-06 415 99 6 0 0 0 0.0028653 3 56332 73.248 55.863 1 1.379 1.1359 0 10626000 4443500 6182400 39939 486 15059 15465 62675;62676;62677 62677 YDTDFYILDK 10 1 0 Unmodified _YDTDFYILDK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 650.8138 2 646.805894 1291.59723 NaN NaN NaN -0.5706 -0.00036907 NaN NaN NaN NaN 97.874 0.76123 97.874 97.555 98.316 0 0 0 0 0.0029292 1 59731 78.556 42 1 NaN NaN 0 5504100 0 5504100 39940 610 15060 15466 62678 62678 YDTDFYILDK 10 1 0 Unmodified _YDTDFYILDK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 646.8053 2 646.805894 1291.59723 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.073 1 98.073 97.573 98.573 -7.6294E-06 0 0 0 0.0077161 1 59908 60.518 30.264 1 39941 610 15060 15466 62679 62679 YDTDFYILDK 10 1 0 Unmodified _YDTDFYILDK_ 0 0 0 D3DP78;A0A140VJW5;P14868;Q53T60 D3DP78 D3DP78 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.8054 2 646.805894 1291.59723 76671.35 1.0465 0.00067688 -0.14203 -9.1866E-05 0.90447 0.00058502 646.805746259803 650.812965985266 97.222 0.66307 97.222 96.897 97.56 -7.6294E-06 184 52 4 0 0 0 0.00045292 2 60631 86.624 48.78 1 1.2424 1.2518 0 13410000 6475600 6934300 39942 610 15060 15466 62680;62681 62681 YDTVLDILR 9 0 1 Unmodified _YDTVLDILR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.3096 2 554.305864 1106.59717 82211.27 0.77332 0.00042866 -0.38343 -0.00021254 0.38989 0.00021612 554.305555507383 559.30973963359 112.33 0.83721 112.33 111.91 112.75 0 294 59 8 0 0 0 0.0010522 2 70670 90.657 74.183 1 0.68093 0.74514 0 52732000 31375000 21356000 39943 1471 15061 15467 62682;62683 62683 YDTVLDILR 9 0 1 Unmodified _YDTVLDILR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.3053 2 554.305864 1106.59717 81883.45 0.83839 0.00046473 -0.30858 -0.00017105 0.52982 0.00029368 554.30557353796 559.309740717924 111.68 0.81059 111.68 111.28 112.09 7.6294E-06 264 55 7 0 0 0 0.0010522 2 71898 90.657 79.016 1 0.74331 0.84208 0 48034000 25562000 22472000 39944 1471 15061 15467 62684;62685 62684 YDTVLDILR 9 0 1 Unmodified _YDTVLDILR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.3064 2 554.305864 1106.59717 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.19 1 112.19 111.69 112.69 0 0 0 0 0.027645 1 72556 53.775 39.106 1 39945 1471 15061 15467 62686 62686 YDTVLDILR 9 0 1 Unmodified _YDTVLDILR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.3056 2 554.305864 1106.59717 81678.5 0.72697 0.00040297 0.40438 0.00022415 1.1314 0.00062712 554.305759195233 559.310054734862 123.22 1.0566 123.22 122.61 123.67 0 191 47 8 0 0 0 0.0034791 2 73513 71.692 64.462 1 1.3189 1.0818 0 16958000 7069100 9888800 39946 1471 15061 15467 62687;62688 62687 YDTVLDILR 9 0 1 Unmodified _YDTVLDILR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.3054 2 554.305864 1106.59717 81557.57 0.87629 0.00048573 0.55384 0.000307 1.4301 0.00079273 554.305525122088 559.310772376685 122.99 1.0459 122.99 122.53 123.57 0 212 48 9 0 0 0 0.00028235 1 72487 103.56 93.149 1 1.6847 1.4363 0 19826000 7507700 12318000 39947 1471 15061 15467 62689 62689 YDVSEFCSYIK 11 1 0 Unmodified _YDVSEFCSYIK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.8152 2 705.815935 1409.61732 78160.47 0.56211 0.00039675 -0.67834 -0.00047878 -0.11622 -8.2031E-05 705.81553270896 709.822738914015 96.195 0.35863 96.195 96.015 96.374 0 58 31 4 0 0 0 0.0004486 1 59966 77.662 72.122 1 0.42177 0.42259 0 5570300 3037900 2532400 39948 1233 15062 15468 62690 62690 YDVSEFCSYIK 11 1 0 Unmodified _YDVSEFCSYIK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.8166 2 705.815935 1409.61732 72728.31 0.79583 0.00056171 -0.44065 -0.00031102 0.35517 0.00025069 705.815500399903 709.822804338101 109.78 0.48189 109.78 109.55 110.03 7.6294E-06 116 23 7 0 0 0 0.023148 2 63357 42.395 38.508 1 1.4848 1.1747 0 5045300 1827400 3217900 39949 1233 15062 15468 62691;62692 62692 YDVSEFCSYIK 11 1 0 Unmodified _YDVSEFCSYIK_ 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 710.3253 2 705.815935 1409.61732 73211.52 0.75428 0.00053238 -0.40565 -0.00028631 0.34863 0.00024607 705.815536737931 709.822848577619 109.75 0.50208 109.75 109.53 110.03 -7.6294E-06 118 25 8 0 0 0 0.0088222 1 62299 50.108 49.138 1 1.6597 1.3624 0 5207000 1786500 3420500 39950 1233 15062 15468 62693 62693 YDVYLINPQGK 11 1 0 Unmodified _YDVYLINPQGK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;B5MCB4;A0A0S2Z401;A0A0D9SFX7;D5L9I4;A0A0S2Z3U3 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 655.3434 2 655.342978 1308.6714 82968.44 0.59733 0.00039146 0.98964 0.00064855 1.587 0.00104 655.343104975579 659.350711417325 83.713 0.54778 83.713 83.391 83.938 -7.6294E-06 137 44 4 0 0 0 0.00046852 1 50218 76.1 56.829 1 0.61552 0.63857 0 12564000 7425800 5137900 39951 623 15063 15469 62694 62694 YDVYLINPQGK 11 1 0 Unmodified _YDVYLINPQGK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;B5MCB4;A0A0S2Z401;A0A0D9SFX7;D5L9I4;A0A0S2Z3U3 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 655.344 2 655.342978 1308.6714 76639.65 0.89182 0.00058445 0.34039 0.00022307 1.2322 0.00080752 655.343209274918 659.350335350263 95.494 0.7282 95.494 95.209 95.937 0 207 51 6 0 0 0 0.0046747 2 53385 57.59 50.999 1 0.68023 0.52865 0 3621600 2137500 1484100 39952 623 15063 15469 62695;62696 62695 YDVYLINPQGK 11 1 0 Unmodified _YDVYLINPQGK_ 0 0 0 A0A140VKC4;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;E9LUH4;P51608;E1B2J3;E9LUH3;C6KG45;D6QZ43;A0A087X1U4;C6KG44;I6LM39;A0A087WVW7;B5MCB4;A0A0S2Z401;A0A0D9SFX7;D5L9I4;A0A0S2Z3U3 A0A140VKC4 A0A140VKC4 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.3509 2 655.342978 1308.6714 77554.22 0.5264 0.00034497 0.28714 0.00018818 0.81354 0.00053315 655.343145554333 659.350421921082 95.406 0.62785 95.406 95.191 95.819 0 168 42 5 0 0 0 0.0017197 2 52592 65.347 54.196 1 0.62016 0.48986 0 3926700 2434500 1492200 39953 623 15063 15469 62697;62698 62698 YDWDLLAAR 9 0 1 Unmodified _YDWDLLAAR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2;K7EP67;K7EJ74 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.7833 2 561.782556 1121.55056 82038.86 0.61363 0.00034473 -0.018788 -1.0555E-05 0.59484 0.00033417 561.782630921869 566.786344482774 103.81 0.78774 103.81 103.53 104.31 -7.6294E-06 204 62 5 0 0 0 0.0055856 1 63912 66.351 60.39 1 0.75477 0.75946 0 9333100 4713600 4619500 39954 794 15064 15470 62699 62699 YDWDLLAAR 9 0 1 Unmodified _YDWDLLAAR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2;K7EP67;K7EJ74 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.787 2 561.782556 1121.55056 82433.05 1.0234 0.00057493 -0.41485 -0.00023306 0.60855 0.00034187 561.782339307243 566.78640337849 115.47 0.4846 115.47 115.24 115.73 0 95 23 5 0 0 0 0.04753 1 67720 39.022 34.039 1 0.86533 0.75264 0 1912700 1018000 894740 39955 794 15064 15470 62700 62700 YDWDLLAAR 9 0 1 Unmodified _YDWDLLAAR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2;K7EP67;K7EJ74 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 566.7872 2 561.782556 1121.55056 83534.21 0.71134 0.00039962 0.31765 0.00017845 1.029 0.00057807 561.782555499152 566.786844488487 115.41 0.52544 115.41 115.18 115.7 -7.6294E-06 75 24 4 0 0 0 0.034146 1 66665 44.377 40.538 1 0.82938 0.72335 0 1466200 720960 745260 39956 794 15064 15470 62701 62701 YDYNSGEELESYK 13 1 0 Unmodified _YDYNSGEELESYK_ 0 0 0 Q9Y3F4;B0AZV0;H0YH33 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 802.8459 2 798.83865 1595.66275 67597.73 0.63756 0.00050931 0.26962 0.00021538 0.90718 0.00072469 798.839048096373 802.845720454723 58.611 0.71799 58.611 58.266 58.984 0 246 59 6 0 0 0 4.1362E-05 2 33132 97.452 97.452 1 3.1678 3.1142 0 23541000 5649100 17892000 39957 2136 15065 15471 62702;62703 62702 YDYNSGEELESYK 13 1 0 Unmodified _YDYNSGEELESYK_ 0 0 0 Q9Y3F4;B0AZV0;H0YH33 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 798.8389 2 798.83865 1595.66275 68238.2 0.76463 0.00061082 0.18999 0.00015177 0.95462 0.00076259 798.838737951129 802.845746779978 57.725 0.7169 57.725 57.412 58.129 0 234 59 6 0 0 0 1.009E-18 2 33368 141.89 139.95 1 3.4049 3.4463 0 29062000 7296900 21765000 39958 2136 15065 15471 62704;62705 62705 YDYNSGEELESYK 13 1 0 Unmodified _YDYNSGEELESYK_ 0 0 0 Q9Y3F4;B0AZV0;H0YH33 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 803.3491 2 798.83865 1595.66275 68557.96 0.49826 0.00039803 0.404 0.00032273 0.90226 0.00072076 799.340212956724 802.845950869941 68.834 0.52109 68.834 68.541 69.062 0 167 38 6 0 0 0 0.01375 1 35931 37.94 37.94 1 3.3171 2.6311 0 4558000 1237200 3320800 39959 2136 15065 15471 62706 62706 YDYNSGEELESYK 13 1 0 Unmodified _YDYNSGEELESYK_ 0 0 0 Q9Y3F4;B0AZV0;H0YH33 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 802.8448 2 798.83865 1595.66275 67040.58 0.53784 0.00042965 -0.13914 -0.00011115 0.3987 0.0003185 798.838607822846 802.845499048207 69.566 0.52167 69.566 69.315 69.837 0 146 35 6 0 0 0 0.0027734 2 35837 52.391 52.391 1 2.6007 2.0841 0 4182300 1087200 3095000 39960 2136 15065 15471 62707;62708 62708 YEAAGTLVTLSSAPTAIK 18 1 0 Unmodified _YEAAGTLVTLSSAPTAIK_ 0 0 0 P53618;E9PP73 P53618 P53618 COPB1 Coatomer subunit beta MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.9419 2 896.988192 1791.96183 68269.16 0.77126 0.00069181 -0.74018 -0.00066393 0.031078 2.7877E-05 897.489124344975 900.994814344223 101.49 0.5878 101.49 101.21 101.8 0 189 46 6 0 0 0 0.0070193 1 63839 47.621 47.621 1 1.5132 1.5161 0 13886000 6030900 7855200 39961 1606 15066 15472 62709 62709 YEAAGTLVTLSSAPTAIK 18 1 0 Unmodified _YEAAGTLVTLSSAPTAIK_ 0 0 0 P53618;E9PP73 P53618 P53618 COPB1 Coatomer subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 896.9882 2 896.988192 1791.96183 66149.77 0.76344 0.0006848 -0.098835 -8.8654E-05 0.66461 0.00059614 896.987241718328 900.99518941055 114.42 0.47623 114.42 114.25 114.73 -7.6294E-06 87 20 8 0 0 0 0.0086534 2 66846 30.483 22.178 1 0.79058 0.6265 0 4818400 2364500 2453900 39962 1606 15066 15472 62710;62711 62710 YEAAGTLVTLSSAPTAIK 18 1 0 Unmodified _YEAAGTLVTLSSAPTAIK_ 0 0 0 P53618;E9PP73 P53618 P53618 COPB1 Coatomer subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 896.9882 2 896.988192 1791.96183 65545.93 0.33897 0.00030405 -0.30399 -0.00027267 0.034979 3.1376E-05 896.987593680257 900.995298648252 114.26 0.46732 114.26 114.08 114.54 7.6294E-06 89 19 7 0 0 0 0.010825 1 65882 28.632 22.909 1 0.83921 0.68875 0 5179100 2627200 2551900 39963 1606 15066 15472 62712 62712 YEAFLQR 7 0 1 Unmodified _YEAFLQR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 468.7441 2 463.74016 925.465767 89560.2 0.35345 0.00016391 -0.58035 -0.00026913 -0.2269 -0.00010522 463.739842691608 468.743936165267 50.755 0.28106 50.755 50.585 50.866 -3.8147E-06 92 25 5 0 0 0 0.02696 1 28010 83.801 53.616 1 1.2573 1.2803 0 27235000 13289000 13946000 39964 1088;1189 15067 15473 62713 62713 YEAIQLTFK 9 1 0 Unmodified _YEAIQLTFK_ 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.8029 2 556.802957 1111.59136 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.91 1 88.91 88.41 89.41 0 0 0 0 0.0083009 1 53631 65.305 42.683 1 39965 803 15068 15474 62714 62714 YEAIYPETAAILGYCR 16 0 1 Unmodified _YEAIYPETAAILGYCR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 945.9608 2 945.458744 1888.90294 64046.17 0.8119 0.00076761 0.24042 0.00022731 1.0523 0.00099492 945.458990672031 950.462501780514 122.41 0.69406 122.41 122.07 122.77 0 185 33 8 0 0 0 8.3162E-05 2 72976 80.871 80.871 1 1.0463 0.86835 0 20801000 8672000 12129000 39966 118;1184 15069 15475 62715;62716 62716 YEAIYPETAAILGYCR 16 0 1 Unmodified _YEAIYPETAAILGYCR_ 0 0 0 A0A024R2M8;X5DRB1;D9I4E1;Q01831;A8K146;D2CPK7;D2CPK0;D2CPI8 A0A024R2M8;D2CPI8 A0A024R2M8 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 945.9614 2 945.458744 1888.90294 64299.96 0.84774 0.0008015 0.033803 3.196E-05 0.88154 0.00083346 945.960506754473 950.462355428753 122.23 0.59924 122.23 121.94 122.54 -7.6294E-06 183 30 9 0 0 0 0.00015091 1 71953 62.338 62.338 1 1.061 0.88592 0 16115000 8034600 8080100 39967 118;1184 15069 15475 62717 62717 YEALQTFAR 9 0 1 Unmodified _YEALQTFAR_ 0 0 0 A0A024R804;A8WFP5;O60675;A0A024R8X1;O15525 A0A024R804;A0A024R8X1 A0A024R804 MAFK;hCG_1991559;MAFG Transcription factor MafK;Transcription factor MafG MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.7872 2 549.782556 1097.55056 82306.02 0.49195 0.00027047 0.16236 8.9265E-05 0.65432 0.00035973 549.782488929185 554.78684904178 63.02 1.1971 63.02 62.377 63.575 3.8147E-06 455 115 6 0 0 0 1.1693E-06 3 36068 136.8 85.01 1 1.4179 1.4529 0 35981000 15504000 20477000 39968 239;262 15070 15476 62718;62719;62720 62718 YEALQTFAR 9 0 1 Unmodified _YEALQTFAR_ 0 0 0 A0A024R804;A8WFP5;O60675;A0A024R8X1;O15525 A0A024R804;A0A024R8X1 A0A024R804 MAFK;hCG_1991559;MAFG Transcription factor MafK;Transcription factor MafG MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.7869 2 549.782556 1097.55056 80899.43 0.53915 0.00029642 0.010539 5.794E-06 0.54969 0.00030221 549.782498377128 554.786707220823 61.698 1.0739 61.698 61.1 62.174 0 418 99 6 0 0 0 2.1383E-05 3 35994 117.04 72.589 1 1.3638 1.5677 0 53023000 20671000 32352000 39969 239;262 15070 15476 62721;62722;62723 62722 YEALQTFAR 9 0 1 Unmodified _YEALQTFAR_ 0 0 0 A0A024R804;A8WFP5;O60675;A0A024R8X1;O15525 A0A024R804;A0A024R8X1 A0A024R804 MAFK;hCG_1991559;MAFG Transcription factor MafK;Transcription factor MafG MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.7874 2 549.782556 1097.55056 83121.24 0.32927 0.00018103 0.42455 0.00023341 0.75383 0.00041444 549.78257537903 554.786785623603 72.286 0.97966 72.286 71.971 72.951 -7.6294E-06 293 74 6 0 0 0 0.0019924 2 38095 78.192 40.633 1 2.075 1.7504 0 4741700 1548400 3193300 39970 239;262 15070 15476 62724;62725 62724 YEALQTFAR 9 0 1 Unmodified _YEALQTFAR_ 0 0 0 A0A024R804;A8WFP5;O60675;A0A024R8X1;O15525 A0A024R804;A0A024R8X1 A0A024R804 MAFK;hCG_1991559;MAFG Transcription factor MafK;Transcription factor MafG MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.787 2 549.782556 1097.55056 82360.77 0.38144 0.00020971 0.39304 0.00021609 0.77449 0.0004258 549.782690840272 554.786718722892 72.709 1.0235 72.709 72.358 73.382 -7.6294E-06 283 82 5 0 0 0 0.013268 1 37528 56.729 32.575 1 1.9167 1.6121 0 4811000 1540800 3270200 39971 239;262 15070 15476 62726 62726 YEDAYQYQNIFGPLVK 16 1 0 Unmodified _YEDAYQYQNIFGPLVK_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 978.9858 2 974.477991 1946.94143 72551.83 0.43929 0.00042808 -0.0027018 -2.6329E-06 0.43659 0.00042544 974.980771467925 978.986556639252 116.76 0.39304 116.76 116.58 116.97 7.6294E-06 90 26 6 0 0 0 1.8873E-08 2 74588 101.95 101.95 1 2.5576 2.5885 0 6782700 2286000 4496800 39972 231 15071 15477 62727;62728 62728 YEDAYQYQNIFGPLVK 16 1 0 Unmodified _YEDAYQYQNIFGPLVK_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 978.9888 2 974.477991 1946.94143 NaN NaN NaN -0.66068 -0.00064382 NaN NaN NaN NaN 116.26 0.43832 116.26 116.06 116.5 0 0 0 0 1.1725E-12 1 75999 112.13 102.34 1 NaN NaN 0 8720600 0 8720600 39973 231 15071 15477 62729 62729 YEDAYQYQNIFGPLVK 16 1 0 Unmodified _YEDAYQYQNIFGPLVK_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 978.9874 2 974.477991 1946.94143 62081.17 0.59911 0.00058382 0.80588 0.00078531 1.405 0.0013691 974.981097434102 978.987784812407 128.46 0.45987 128.46 128.26 128.72 0 62 19 6 0 0 0 0.0033519 1 77572 36.982 36.982 1 0.77034 0.6266 0 2687800 1454900 1232800 39974 231 15071 15477 62730 62730 YEDAYQYQNIFGPLVK 16 1 0 Unmodified _YEDAYQYQNIFGPLVK_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 978.9879 2 974.477991 1946.94143 62383.74 0.36309 0.00035382 0.59444 0.00057927 0.95753 0.00093309 974.479462945815 978.484867555522 128.25 0.4951 128.25 128.02 128.52 1.5259E-05 80 20 7 0 0 0 0.00022947 1 76540 58.511 58.511 1 0.94728 0.7564 0 4118900 1833100 2285800 39975 231 15071 15477 62731 62731 YEDEINRR 8 0 2 Unmodified _YEDEINRR_ 0 0 1 CON__P08729 CON__P08729 CON__P08729 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 365.5128 3 365.512355 1093.51524 97988.25 0.14291 5.2234E-05 -0.23751 -8.6812E-05 -0.094603 -3.4579E-05 365.512303605151 372.184295925722 17.57 0.32812 17.57 17.421 17.749 0 70 12 7 0 0 0 0.0016312 2 4666 86.953 68.514 1 0.82741 0.89886 0 36270000 19606000 16665000 + 39976 1158 15072 15478 62732;62733 62732 YEDEINRR 8 0 2 Unmodified _YEDEINRR_ 0 0 1 CON__P08729 CON__P08729 CON__P08729 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.7653 2 547.764894 1093.51524 79162.49 0.61851 0.0003388 0.13323 7.298E-05 0.75174 0.00041178 547.764682499283 557.772957082831 17.57 0.44515 17.57 17.449 17.894 0 92 16 10 0 0 0 3.5387E-06 2 4692 147.52 147.52 1 0.89491 0.97448 0 78983000 41424000 37559000 + 39977 1158 15072 15478 62734;62735 62735 YEDGIALLR 9 0 1 Unmodified _YEDGIALLR_ 0 0 0 H0YIW2;B3KMP2;Q2M2R1;Q4KMX6;A8KAQ7;A5D8X2;A0A024RBJ3;Q9UJX3 H0YIW2 H0YIW2 ANAPC7 Anaphase-promoting complex subunit 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2897 2 525.284931 1048.55531 89217.55 0.25537 0.00013414 0.14679 7.7106E-05 0.40215 0.00021125 525.285244931348 530.28903875919 83.924 0.33633 83.924 83.753 84.089 7.6294E-06 74 28 4 0 0 0 0.0016071 1 50185 83.206 51.917 1 2.004 2.0827 0 5481200 2125300 3355900 39978 341 15073 15479 62736 62736 YEDGIEVNQEIVVITTK 17 1 0 Unmodified _YEDGIEVNQEIVVITTK_ 0 0 0 O60832;H7C2Q2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 980.0148 2 975.506945 1948.99934 61515.87 0.40341 0.00039352 -2.1637 -0.0021107 -1.7603 -0.0017172 976.007096054578 980.013574406461 119.31 0.62666 119.31 119.04 119.67 0 100 25 6 0 0 0 0.011389 1 70622 30.874 30.874 1 0.65191 0.51431 0 10792000 6499600 4292800 39979 1398 15074 15480 62737 62737 YEDGIEVNQEIVVITTK 17 1 0 Unmodified _YEDGIEVNQEIVVITTK_ 0 0 0 O60832;H7C2Q2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 979.5131 2 975.506945 1948.99934 60690.96 0.24627 0.00024024 -1.3171 -0.0012849 -1.0709 -0.0010447 975.505914318051 980.013969480995 119.15 0.49967 119.15 118.94 119.43 7.6294E-06 89 20 10 0 0 0 0.011408 1 69580 30.862 30.862 1 0.71853 0.57682 0 14104000 8757500 5346100 39980 1398 15074 15480 62738 62738 YEDICPSTHNMDVPNIK 17 1 0 Oxidation (M) _YEDICPSTHNM(ox)DVPNIK_ YEDICPSTHNM(1)DVPNIK YEDICPSTHNM(50.08)DVPNIK 0 1 0 I3L397;I3L504;P63241;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.6458 3 683.639918 2047.89793 74306.06 0.60488 0.00041352 -0.073396 -5.0177E-05 0.53148 0.00036334 683.974306069856 686.311332992438 57.693 0.56912 57.693 57.464 58.034 -3.8147E-06 132 45 6 0 0 0 4.9704E-05 1 32549 50.079 50.079 1 4.3056 4.2828 0 9605200 2742600 6862700 39981 1322 15075 15481 62739 62739 1000 YEDYDYR 7 0 1 Unmodified _YEDYDYR_ 0 0 0 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2064 2 512.206347 1022.39814 84907.73 0.3797 0.00019448 0.051941 2.6605E-05 0.43164 0.00022109 512.206254266184 517.210508388175 27.869 0.42341 27.869 27.636 28.059 -1.9073E-06 124 28 6 0 0 0 0.020239 2 12949 94.262 71.64 1 1.1745 1.2014 0 35017000 17141000 17876000 39982 1716 15076 15482 62740;62741 62741 YEDYDYR 7 0 1 Unmodified _YEDYDYR_ 0 0 0 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.2112 2 512.206347 1022.39814 84602.18 0.19037 9.7511E-05 -0.011133 -5.7025E-06 0.17924 9.1809E-05 512.206334248532 517.210392042558 27.329 0.27765 27.329 27.205 27.483 0 68 14 6 0 0 0 0.023468 2 12580 91.041 70.759 1 1.34 1.4417 0 25722000 10859000 14863000 39983 1716 15076 15482 62742;62743 62742 YEEIVK 6 1 0 Unmodified _YEEIVK_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q96RE1;Q53GA1;Q8IUB0;B4DV42;A0A087WVQ9;Q504Z0;Q53G89;Q9NZS6;B4E2C5;A0A087WV01;Q9H2I7;Q16577;A9X7H1;Q53HR1 Q6IPT9;Q53HR1 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 390.7115 2 390.710537 779.40652 96339.07 0.188 7.3453E-05 -0.43203 -0.0001688 -0.24403 -9.5346E-05 390.710637762464 394.717338163148 28.045 0.90226 28.045 27.649 28.551 0 202 54 8 0 0 0 0.041831 1 13157 106.29 34.291 1 2.5484 3.0122 0 1459200000 441940000 1017200000 39984 1658;1790 15077 15483 62744 62744 YEELQITAGR 10 0 1 Unmodified _YEELQITAGR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 590.3044 2 590.303852 1178.59315 NaN NaN NaN -0.045875 -2.708E-05 NaN NaN NaN NaN 57.784 1.1889 57.784 57.399 58.588 0 0 0 0 1.7789E-15 1 33275 133.13 91.242 1 NaN NaN 0 1148200000 1148200000 0 + 39985 1308;1309 15078 15484 62745 62745 YEELQITAGR 10 0 1 Unmodified _YEELQITAGR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 590.3041 2 590.303852 1178.59315 NaN NaN NaN -0.12906 -7.6184E-05 NaN NaN NaN NaN 68.262 0.93568 68.262 67.809 68.745 0 0 0 0 9.0363E-17 1 35468 143.04 101.81 1 NaN NaN 0 188610000 188610000 0 + 39986 1308;1309 15078 15484 62746 62746 YEELQITAGR 10 0 1 Unmodified _YEELQITAGR_ 0 0 0 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRF9;H6VRG2 H6VRG3;H6VRG2 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.304 2 590.303852 1178.59315 NaN NaN NaN -0.045144 -2.6649E-05 NaN NaN NaN NaN 68.727 0.92252 68.727 68.336 69.259 0 0 0 0 2.7888E-51 1 35016 185.6 149.2 1 NaN NaN 0 150850000 150850000 0 + 39987 1308;1309 15078 15484 62747 62747 YEELQQTAGR 10 0 1 Unmodified _YEELQQTAGR_ 0 0 0 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;H0YIN9 CON__P13647 CON__P13647 KRT5 Keratin, type II cytoskeletal 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 597.791 2 597.791109 1193.56767 NaN NaN NaN 0.1715 0.00010252 NaN NaN NaN NaN 29.082 0.82206 29.082 28.781 29.603 -1.9073E-06 0 0 0 0.052955 1 11631 46.001 36.414 1 NaN NaN 0 11787000 11787000 0 + 39988 1162 15079 15485 62748 62748 YEELQSLAGK 10 1 0 Unmodified _YEELQSLAGK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.2927 2 569.292953 1136.57135 80183.53 0.66585 0.00037906 0.069622 3.9635E-05 0.73547 0.0004187 569.292930577628 573.300029384173 54.567 1.3947 54.567 54.131 55.526 0 625 129 9 0 0 0 1.0331E-09 3 31011 133.57 10.944 1 1.1058 1.3034 0 331810000 159050000 172760000 + 39989 1156 15080 15486 62749;62750;62751 62751 YEELQSLAGK 10 1 0 Unmodified _YEELQSLAGK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.2931 2 569.292953 1136.57135 79482.7 0.53533 0.00030476 -0.14324 -8.1546E-05 0.39209 0.00022321 569.292745834502 573.299878008962 53.577 1.8047 53.577 52.936 54.741 0 823 163 8 0 0 0 5.461E-12 4 30826 144.09 11.686 1 1.092 1.2673 0 223000000 104420000 118580000 + 39990 1156 15080 15486 62752;62753;62754;62755 62754 YEELQSLAGK 10 1 0 Unmodified _YEELQSLAGK_ 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 569.293 2 569.292953 1136.57135 80414.63 0.2277 0.00012963 0.081686 4.6503E-05 0.30939 0.00017613 569.292945462844 573.300009419663 64.051 1.765 64.051 63.573 65.338 0 694 146 8 0 0 0 0.00012052 1 32131 96.668 8.2984 1 1.9144 1.5336 0 21719000 7439400 14280000 + 39991 1156 15080 15486 62756 62756 YEELQVTAGK 10 1 0 Unmodified _YEELQVTAGK_ 0 0 0 CON__Q5XKE5;Q5XKE5 CON__Q5XKE5 CON__Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 569.2932 2 569.292953 1136.57135 79762.61 0.24271 0.00013817 0.12424 7.0731E-05 0.36695 0.0002089 569.292942489454 573.300034620303 63.525 1.9115 63.525 62.968 64.879 0 703 156 7 0 0 0 0.00051211 2 32490 85.67 1.8872 1 1.9213 1.56 0 27336000 9808700 17527000 + 39992 1175 15081 15487 62757;62758 62758 YEELQVTAGK 10 1 0 Unmodified _YEELQVTAGK_ 0 0 0 CON__Q5XKE5;Q5XKE5 CON__Q5XKE5 CON__Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 573.3002 2 569.292953 1136.57135 80414.63 0.2277 0.00012963 0.081686 4.6503E-05 0.30939 0.00017613 569.292945462844 573.300009419663 64.051 1.765 64.051 63.573 65.338 0 694 146 8 0 0 0 4.0245E-06 1 32100 109.71 2.1398 1 1.9144 1.5336 0 21719000 7439400 14280000 + 39993 1175 15081 15487 62759 62759 YEELQVTAGR 10 0 1 Unmodified _YEELQVTAGR_ 0 0 0 CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259 B2R853 KRT75;KRT6C;KRT6A Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.2961 2 583.296027 1164.5775 NaN NaN NaN 0.33796 0.00019713 NaN NaN NaN NaN 47.13 0.83422 47.13 46.716 47.55 0 0 0 0 1.7789E-15 1 25451 133.13 87.454 1 NaN NaN 0 53942000 53942000 0 + 39994 859;1154;1147;1180 15082 15488 62760 62760 YEELQVTAGR 10 0 1 Unmodified _YEELQVTAGR_ 0 0 0 CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259 B2R853 KRT75;KRT6C;KRT6A Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.2968 2 583.296027 1164.5775 NaN NaN NaN -0.050711 -2.9579E-05 NaN NaN NaN NaN 46.067 0.86541 46.067 45.659 46.524 0 0 0 0 0.0038582 1 25219 74.92 57.68 1 NaN NaN 0 62061000 62061000 0 + 39995 859;1154;1147;1180 15082 15488 62761 62761 YEELQVTAGR 10 0 1 Unmodified _YEELQVTAGR_ 0 0 0 CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259 B2R853 KRT75;KRT6C;KRT6A Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 583.2983 2 583.296027 1164.5775 NaN NaN NaN 0.3424 0.00019972 NaN NaN NaN NaN 54.315 1.0529 54.315 53.867 54.92 0 0 0 0 0.052955 1 26959 46.001 36.787 1 NaN NaN 0 7857200 7857200 0 + 39996 859;1154;1147;1180 15082 15488 62762 62762 YEELQVTAGR 10 0 1 Unmodified _YEELQVTAGR_ 0 0 0 CON__O95678;O95678;CON__Q8BGZ7;B2R853;B4DRR0;B4DRY0;CON__P48668;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B4DRU6;B4DWU6;CON__P04259;B4DKV4 CON__O95678;CON__Q8BGZ7;B2R853;CON__P04259 B2R853 KRT75;KRT6C;KRT6A Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 583.7982 2 583.296027 1164.5775 NaN NaN NaN 0.73632 0.00042949 NaN NaN NaN NaN 54.804 1.2364 54.804 54.261 55.498 3.8147E-06 0 0 0 0.012103 1 26670 61.161 47.808 1 NaN NaN 0 7266900 7266900 0 + 39997 859;1154;1147;1180 15082 15488 62763 62763 YEESLADSDNK 11 1 0 Unmodified _YEESLADSDNK_ 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.7825 2 635.775322 1269.53609 77260.47 0.29935 0.00019032 0.19945 0.0001268 0.4988 0.00031712 635.775579889395 639.782582687575 24.67 0.37478 24.67 24.508 24.883 0 43 16 4 0 0 0 0.00038057 2 10406 83 80.07 1 0.60355 0.61264 0 6122100 3927800 2194300 39998 1843 15083 15489 62764;62765 62764 YEGNVTEETR 10 0 1 Unmodified _YEGNVTEETR_ 0 0 0 Q8IY37;F5H3Y4 Q8IY37 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.2729 2 599.272749 1196.53095 80456.3 0.63519 0.00038065 0.062089 3.7208E-05 0.69728 0.00041786 599.272811873797 604.276468046279 21.161 0.37511 21.161 21.014 21.389 0 48 17 6 0 0 0 7.3668E-06 1 7479 107.21 99.162 1 1.1756 1.1969 0 7097500 3417000 3680400 39999 1897 15084 15490 62766 62766 YEHVLEALNDYK 12 1 0 Unmodified _YEHVLEALNDYK_ 0 0 0 Q9Y483;Q96G26;B4DZG1;B4DZ69 Q9Y483 Q9Y483 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 501.2514 3 498.580546 1492.71981 87156.98 0.24871 0.000124 -0.34072 -0.00016988 -0.092008 -4.5873E-05 498.914609378488 501.251878203421 70.473 0.57195 70.473 70.227 70.799 0 181 46 6 0 0 0 0.017137 1 41960 31.708 27.317 1 1.1181 1.1713 0 19451000 9768100 9682900 40000 2143 15085 15491 62767 62767 YEIAVETEMKK 11 2 0 Oxidation (M) _YEIAVETEM(ox)KK_ YEIAVETEM(1)KK YEIAVETEM(63.28)KK 0 1 1 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.8388 2 678.83941 1355.66427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.203 1 35.203 34.703 35.703 0 0 0 0 0.0033248 1 17676 63.283 24.135 1 40001 1542 15086 15492 62768 62768 1300 YEIAVETEMKK 11 2 0 Oxidation (M) _YEIAVETEM(ox)KK_ YEIAVETEM(1)KK YEIAVETEM(61.35)KK 0 1 1 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.3401 2 678.83941 1355.66427 NaN NaN NaN -1.4344 -0.00097375 NaN NaN NaN NaN 34.206 0.19646 34.206 34.072 34.268 0 0 0 0 0.0045595 2 17230 61.353 22.205 1 NaN NaN 0 4986800 4986800 0 40002 1542 15086 15492 62769;62770 62769 1300 YEILQSVDDAAIVIK 15 1 0 Unmodified _YEILQSVDDAAIVIK_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;Q59GP7;K7EKJ9;K7EKY0;K7ER69;K7EQR9 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.3893 2 838.958903 1675.90325 69025.13 1.1773 0.00098774 -0.62092 -0.00052093 0.55642 0.00046681 838.958350111281 842.96537453022 115.83 0.29404 115.83 115.64 115.93 0 71 20 4 0 0 0 0.010234 1 73870 52.391 45.417 1 1.1933 1.1809 0 8320500 4223000 4097500 40003 220 15087 15493 62771 62771 YEILQSVDDAAIVIK 15 1 0 Unmodified _YEILQSVDDAAIVIK_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;Q59GP7;K7EKJ9;K7EKY0;K7ER69;K7EQR9 F4ZW64 F4ZW64 ILF3 Interleukin enhancer-binding factor 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 842.9658 2 838.958903 1675.90325 68949.65 0.79647 0.00066821 0.36552 0.00030666 1.162 0.00097486 838.959641650914 842.965921461285 115.28 0.35777 115.28 115.09 115.45 0 67 23 5 0 0 0 6.6387E-05 2 75202 84.479 75.475 1 1.6165 1.6126 0 6480800 3157500 3323300 40004 220 15087 15493 62772;62773 62773 YEILTPNSIPK 11 1 0 Unmodified _YEILTPNSIPK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 641.8609 2 637.853178 1273.6918 NaN NaN NaN 0.40705 0.00025964 NaN NaN NaN NaN 86.515 0.80637 86.515 86.198 87.004 0 0 0 0 0.0023656 1 51949 75.294 57.069 1 NaN NaN 0 31609000 0 31609000 40005 81 15088 15494 62774 62774 YEILTPNSIPK 11 1 0 Unmodified _YEILTPNSIPK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 641.8602 2 637.853178 1273.6918 75553.55 0.73113 0.00046635 0.54012 0.00034451 1.2712 0.00081087 637.852873808112 641.860167561698 85.606 0.82865 85.606 85.202 86.031 0 241 62 6 0 0 0 0.0052438 2 52489 56.563 56.563 1 1.7419 1.9608 0 57029000 15419000 41610000 40006 81 15088 15494 62775;62776 62775 YEILTPNSIPK 11 1 0 Unmodified _YEILTPNSIPK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 641.8607 2 637.853178 1273.6918 NaN NaN NaN 0.60965 0.00038887 NaN NaN NaN NaN 99.342 0.96978 99.342 98.742 99.712 0 0 0 0 0.0082394 1 56066 61.353 40.452 1 NaN NaN 0 5568700 0 5568700 40007 81 15088 15494 62777 62777 YEILTPNSIPK 11 1 0 Unmodified _YEILTPNSIPK_ 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.3633 2 637.853178 1273.6918 NaN NaN NaN 0.46275 0.00029516 NaN NaN NaN NaN 99.223 0.58375 99.223 98.914 99.497 0 0 0 0 0.046979 1 55152 45.161 37.515 1 NaN NaN 0 5995800 0 5995800 40008 81 15088 15494 62778 62778 YEISSVPTFLFFK 13 1 0 Unmodified _YEISSVPTFLFFK_ 0 0 0 A0A140VJK1;O76003 A0A140VJK1 A0A140VJK1 GLRX3 Glutaredoxin-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.9261 2 789.416143 1576.81773 NaN NaN NaN -0.58229 -0.00045967 NaN NaN NaN NaN 130.99 0.91006 130.99 130.47 131.38 0 0 0 0 0.0047052 1 85390 60.434 54.05 1 NaN NaN 0 6563500 0 6563500 40009 602 15089 15495 62779 62779 YEISSVPTFLFFK 13 1 0 Unmodified _YEISSVPTFLFFK_ 0 0 0 A0A140VJK1;O76003 A0A140VJK1 A0A140VJK1 GLRX3 Glutaredoxin-3 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 793.4216 2 789.416143 1576.81773 NaN NaN NaN -1.062 -0.00083833 NaN NaN NaN NaN 130.59 0.77014 130.59 130.11 130.88 0 0 0 0 0.027651 1 87345 43.958 35.737 1 NaN NaN 0 6992100 0 6992100 40010 602 15089 15495 62780 62780 YEITEQR 7 0 1 Unmodified _YEITEQR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 469.7328 2 469.732532 937.45051 NaN NaN NaN 0.13118 6.1619E-05 NaN NaN NaN NaN 25.708 0.8005 25.708 25.296 26.096 0 0 0 0 0.0001146 1 11182 128.48 68.844 1 NaN NaN 0 231840000 231840000 0 40011 342 15090 15496 62781 62781 YEITEQR 7 0 1 Unmodified _YEITEQR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.7368 2 469.732532 937.45051 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.602 1 25.602 25.102 26.102 -1.9073E-06 0 0 0 0.024535 1 11181 119.89 43.296 1 40012 342 15090 15496 62782 62782 YEITEQR 7 0 1 Unmodified _YEITEQR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.7372 2 469.732532 937.45051 86896.08 0.45589 0.00021415 -0.085069 -3.996E-05 0.37082 0.00017419 469.732391524932 474.736618782602 25.428 0.54919 25.428 25.153 25.702 1.9073E-06 133 23 10 0 0 0 0.0050912 2 10956 132.29 69.443 1 0.92109 1.0752 0 532090000 281540000 250550000 40013 342 15090 15496 62783;62784 62784 YEITEQR 7 0 1 Unmodified _YEITEQR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 469.7325 2 469.732532 937.45051 NaN NaN NaN -0.098188 -4.6122E-05 NaN NaN NaN NaN 28.783 0.60482 28.783 28.503 29.108 -1.9073E-06 0 0 0 0.031029 1 11549 68.915 18.875 1 NaN NaN 0 12855000 12855000 0 40014 342 15090 15496 62785 62785 YEITEQRK 8 1 1 Unmodified _YEITEQRK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.7912 2 533.780013 1065.54547 NaN NaN NaN -0.78287 -0.00041788 NaN NaN NaN NaN 18.545 0.35832 18.545 18.372 18.73 0 0 0 0 0.003641 1 5504 94.302 30.823 1 NaN NaN 0 14566000 0 14566000 40015 342 15091 15497 62786 62786 YEITEQRK 8 1 1 Unmodified _YEITEQRK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.7802 2 533.780013 1065.54547 NaN NaN NaN NaN NaN NaN NaN NaN NaN 18.58 1 18.58 18.08 19.08 0 0 0 0 0.014333 1 5506 98.299 37.511 1 40016 342 15091 15497 62787 62787 YEITEQRK 8 1 1 Unmodified _YEITEQRK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.7808 2 533.780013 1065.54547 88738.08 0.50231 0.00026812 -0.10537 -5.6242E-05 0.39694 0.00021188 533.779954941871 542.790927025141 18.648 0.33838 18.648 18.39 18.728 0 35 14 4 0 0 0 0.020571 2 5289 67.981 54.402 1 0.99562 1.0935 0 5376300 3216800 2159500 40017 342 15091 15497 62788;62789 62789 YELGRPAANTK 11 1 1 Unmodified _YELGRPAANTK_ 0 0 1 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.3375 2 610.325119 1218.63569 76339.77 0.53834 0.00032856 0.047762 2.915E-05 0.58611 0.00035772 610.325194733802 619.336268923541 24.051 0.69497 24.051 23.813 24.508 -1.9073E-06 174 31 11 0 0 0 4.3862E-22 2 9776 172.26 136.82 1 0.73182 0.89021 0 494830000 282750000 212080000 40018 1635 15092 15498 62790;62791 62790 YELGRPAANTK 11 1 1 Unmodified _YELGRPAANTK_ 0 0 1 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 413.2264 3 407.219172 1218.63569 92959.59 0.11543 4.7007E-05 -0.22999 -9.3658E-05 -0.11456 -4.6651E-05 407.219167835055 413.226548413619 24.049 0.56327 24.049 23.885 24.449 1.9073E-06 157 25 11 0 0 0 0.00097133 2 9801 62.408 32.435 1 0.80151 0.97584 0 566970000 316200000 250770000 40019 1635 15092 15498 62792;62793 62793 YELGRPAANTK 11 1 1 Unmodified _YELGRPAANTK_ 0 0 1 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 619.3369 2 610.325119 1218.63569 77289.88 0.35153 0.00021455 -0.19349 -0.00011809 0.15805 9.6459E-05 610.325041178225 619.336222294658 23.697 0.61488 23.697 23.542 24.156 0 140 23 12 0 0 0 4.3862E-22 2 9480 175.15 149.59 1 0.71053 0.84587 0 500650000 285810000 214840000 40020 1635 15092 15498 62794;62795 62794 YELGRPAANTK 11 1 1 Unmodified _YELGRPAANTK_ 0 0 1 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 407.2194 3 407.219172 1218.63569 93570.48 0.011065 4.5061E-06 -0.47808 -0.00019468 -0.46701 -0.00019018 407.21909244859 413.226419648645 23.72 0.90606 23.72 23.402 24.308 0 157 36 11 0 0 0 0.0006492 2 9503 67.749 48.618 1 0.75657 0.90189 0 620140000 350510000 269630000 40021 1635 15092 15498 62796;62797 62797 YELGRPAANTK 11 1 1 Unmodified _YELGRPAANTK_ 0 0 1 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 407.2192 3 407.219172 1218.63569 92248.41 -0.16526 -6.7299E-05 -0.086785 -3.534E-05 -0.25205 -0.00010264 407.219249761816 413.226692984328 26.605 1.4218 26.605 26.334 27.756 0 335 65 12 0 0 0 0.015614 2 10043 36.954 20.166 1 0.8919 0.80906 0 160030000 81573000 78460000 40022 1635 15092 15498 62798;62799 62799 YELGRPAANTK 11 1 1 Unmodified _YELGRPAANTK_ 0 0 1 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.3369 2 610.325119 1218.63569 76728.39 0.34469 0.00021038 0.097244 5.935E-05 0.44194 0.00026973 610.325302164604 619.336326424887 26.584 0.98074 26.584 26.377 27.358 0 261 48 10 0 0 0 2.4059E-05 2 10012 111.27 93.446 1 0.90396 0.81509 0 118420000 59822000 58601000 40023 1635 15092 15498 62800;62801 62800 YELGRPAANTK 11 1 1 Unmodified _YELGRPAANTK_ 0 0 1 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 619.3368 2 610.325119 1218.63569 76510.71 0.23686 0.00014456 0.078605 4.7974E-05 0.31546 0.00019253 610.325257514864 619.336350857653 26.643 1.2172 26.643 26.415 27.632 1.9073E-06 299 54 11 0 0 0 3.582E-09 1 9536 131.09 106.97 1 0.8753 0.74823 0 94269000 49629000 44640000 40024 1635 15092 15498 62802 62802 YELGRPAANTK 11 1 1 Unmodified _YELGRPAANTK_ 0 0 1 Q5JR94;P62241;Q5JR95 Q5JR94 Q5JR94 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 413.2268 3 407.219172 1218.63569 92417.18 -0.41982 -0.00017096 0.018325 7.4625E-06 -0.4015 -0.0001635 407.219258479751 413.226750432891 26.647 1.371 26.647 26.392 27.763 0 348 59 12 0 0 0 0.0014163 2 9555 60.49 37.83 1 0.93433 0.79928 0 109620000 55271000 54346000 40025 1635 15092 15498 62803;62804 62803 YELISETGGSHDK 13 1 0 Unmodified _YELISETGGSHDK_ 0 0 0 F4ZW64;F4ZW65;A0A024R7C7;F4ZW66;Q12906;A8K590;B4DFG4;B4DDF3;A0A0S2Z5K8;V9HWK4;Q96SI9 F4ZW64 F4ZW64 ILF3;HEL162;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 718.8409 2 718.33862 1434.66269 71991.38 0.53859 0.00038689 0.21678 0.00015572 0.75537 0.00054261 718.339121418246 722.345696833997 40.824 0.37669 40.824 40.624 41 0 119 32 5 0 0 0 0.013979 2 18866 37.681 33.794 1 0.88739 0.71116 0 2874000 1720400 1153600 40026 220 15093 15499 62805;62806 62806 YELLSEENK 9 1 0 Unmodified _YELLSEENK_ 0 0 0 D3DS96;Q9NRL2;Q59G54 D3DS96 D3DS96 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 566.7836 2 562.777136 1123.53972 NaN NaN NaN -0.20971 -0.00011802 NaN NaN NaN NaN 56.291 0.63359 56.291 55.991 56.624 0 0 0 0 0.04947 1 28321 47.198 37.61 1 NaN NaN 0 1689300 0 1689300 40027 1187 15094 15500 62807 62807 YELQLANPK 9 1 0 Unmodified _YELQLANPK_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 538.2927 2 538.292756 1074.57096 81856.95 0.53016 0.00028538 0.0022409 1.2063E-06 0.5324 0.00028659 538.292722205739 542.299762103671 61.715 0.91345 61.715 61.366 62.279 3.8147E-06 288 73 6 0 0 0 0.0011494 2 35252 89.296 79.903 1 0.91829 0.98908 0 33620000 14530000 19090000 40028 1854 15095 15501 62808;62809 62809 YELQLANPK 9 1 0 Unmodified _YELQLANPK_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.2928 2 538.292756 1074.57096 82967.38 0.384 0.0002067 0.082392 4.4351E-05 0.46639 0.00025105 538.292688834802 542.299862503056 60.446 0.86594 60.446 60.134 61 0 210 62 6 0 0 0 1.76E-06 2 35300 136.16 136.16 1 0.88909 0.89712 0 28285000 13933000 14352000 40029 1854 15095 15501 62810;62811 62811 YELQLANPK 9 1 0 Unmodified _YELQLANPK_ 0 0 0 Q6P2Q9;B4DK16;Q53GM6 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 538.2929 2 538.292756 1074.57096 84472.2 0.33066 0.00017799 0.058278 3.1371E-05 0.38894 0.00020936 538.292572937329 542.299854483225 71.286 0.68053 71.286 71.024 71.704 0 201 47 6 0 0 0 0.0074258 2 37513 61.999 61.999 1 0.86674 0.70303 0 2725700 1473100 1252600 40030 1854 15095 15501 62812;62813 62813 YELVTELNDSR 11 0 1 Unmodified _YELVTELNDSR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 669.8306 2 669.830431 1337.64631 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.915 1 73.915 73.415 74.415 0 0 0 0 0.013619 1 44423 56.404 18.929 1 40031 1581 15096 15502 62814 62814 YELVTELNDSR 11 0 1 Unmodified _YELVTELNDSR_ 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 674.8347 2 669.830431 1337.64631 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.079 1 74.079 73.579 74.579 0 0 0 0 0.025366 1 44546 51.092 25.047 1 40032 1581 15096 15502 62815 62815 YENEVALR 8 0 1 Unmodified _YENEVALR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 497.2544 2 497.253631 992.49271 NaN NaN NaN -0.08166 -4.0606E-05 NaN NaN NaN NaN 36.566 1.245 36.566 36.024 37.269 0 0 0 0 0.0035756 4 18801 94.302 36.743 1 NaN NaN 0 395940000 395940000 0 + 40033 1161 15097 15503 62816;62817;62818;62819 62818 YENEVALR 8 0 1 Unmodified _YENEVALR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.254 2 497.253631 992.49271 NaN NaN NaN -0.077205 -3.8391E-05 NaN NaN NaN NaN 41.665 1.0645 41.665 41.294 42.359 0 0 0 0 0.0032335 2 19664 100.45 45.902 1 NaN NaN 0 86491000 86491000 0 + 40034 1161 15097 15503 62820;62821 62821 YENEVALR 8 0 1 Unmodified _YENEVALR_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.2538 2 497.253631 992.49271 NaN NaN NaN 0.11751 5.8432E-05 NaN NaN NaN NaN 41.767 0.91012 41.767 41.374 42.284 0 0 0 0 0.010177 1 18728 77.282 27.924 1 NaN NaN 0 81278000 81278000 0 + 40035 1161 15097 15503 62822 62822 YESGDHVAVYPANDSALVNQLGK 23 1 0 Unmodified _YESGDHVAVYPANDSALVNQLGK_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8;B4E305 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 816.7357 3 816.399432 2446.17647 NaN NaN NaN -0.12266 -0.00010014 NaN NaN NaN NaN 85.966 0.082817 85.966 85.934 86.017 0 0 0 0 0.025913 1 52995 25.924 22.586 1 NaN NaN 0 10526000 10526000 0 40036 719 15098 15504 62823 62823 YESGDHVAVYPANDSALVNQLGK 23 1 0 Unmodified _YESGDHVAVYPANDSALVNQLGK_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8;B4E305 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.071 3 816.399432 2446.17647 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.148 1 86.148 85.648 86.648 0 0 0 0 0.0010383 1 53107 59.918 52.114 1 40037 719 15098 15504 62824 62824 YETELAMR 8 0 1 Oxidation (M) _YETELAM(ox)R_ YETELAM(1)R YETELAM(60.9)R 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.744 2 514.739499 1027.46445 83695.41 0.2922 0.00015041 -0.13721 -7.0627E-05 0.15499 7.978E-05 514.739548537112 519.743364985002 28.434 0.42872 28.434 28.144 28.572 0 142 29 8 0 0 0 0.0081157 1 13341 60.895 52.123 1 1.5101 1.7425 0 155260000 62828000 92429000 + 40038 316;1155 15099 15505 62825 62825 239 YETELAMR 8 0 1 Oxidation (M) _YETELAM(ox)R_ YETELAM(1)R YETELAM(53.17)R 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 514.7397 2 514.739499 1027.46445 83028.64 0.77271 0.00039775 0.041954 2.1595E-05 0.81467 0.00041934 514.739386857652 519.743549264234 28.69 0.61896 28.69 28.429 29.048 0 117 25 8 0 0 0 0.013837 1 13667 53.166 42.097 1 1.3873 1.6193 0 197100000 84024000 113080000 + 40039 316;1155 15099 15505 62826 62826 239 YETELAMR 8 0 1 Oxidation (M) _YETELAM(ox)R_ YETELAM(1)R YETELAM(107.59)R 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.7393 2 514.739499 1027.46445 82145.05 0.34357 0.00017685 -0.19775 -0.00010179 0.14582 7.506E-05 514.739429280479 519.743392596469 27.863 0.37045 27.863 27.609 27.98 -1.9073E-06 116 20 9 0 0 0 0.00077068 2 13031 107.59 92.154 1 1.4326 1.6525 0 235280000 95321000 139960000 + 40040 316;1155 15099 15505 62827;62828 62828 239 YETELAMR 8 0 1 Oxidation (M) _YETELAM(ox)R_ YETELAM(1)R YETELAM(62.46)R 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9;CON__P05784 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 514.2324 2 514.739499 1027.46445 79048.7 0.3668 0.00018881 0.2181 0.00011226 0.5849 0.00030107 514.739618921315 519.743643544297 28.041 0.53277 28.041 27.795 28.328 0 98 19 8 0 0 0 0.007109 1 13186 62.464 49.476 1 1.4397 1.6587 0 222280000 86448000 135830000 + 40041 316;1155 15099 15505 62829 62829 239 YETELNLR 8 0 1 Unmodified _YETELNLR_ 0 0 0 CON__P02533;P02533;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 519.2664 2 519.266739 1036.51892 NaN NaN NaN -0.86943 -0.00045147 NaN NaN NaN NaN 55.539 0.5422 55.539 55.222 55.764 0 0 0 0 0.0079734 1 31229 81.119 33.203 1 NaN NaN 0 32819000 32819000 0 + 40042 1150 15100 15506 62830 62830 YETELNLR 8 0 1 Unmodified _YETELNLR_ 0 0 0 CON__P02533;P02533;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 519.2672 2 519.266739 1036.51892 84485.63 0.72349 0.00037568 -0.40791 -0.00021182 0.31557 0.00016387 519.266348517251 524.275332840476 54.552 0.55036 54.552 54.191 54.741 0 114 34 5 0 0 0 0.0033611 1 31188 97.033 49.117 1 0.072254 0.083313 0 54782000 50197000 4585400 + 40043 1150 15100 15506 62831 62831 YETELNLR 8 0 1 Unmodified _YETELNLR_ 0 0 0 CON__P02533;P02533;CON__Q6IFX2 CON__P02533 CON__P02533 KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 519.2663 2 519.266739 1036.51892 NaN NaN NaN 0.082914 4.3054E-05 NaN NaN NaN NaN 65.275 1.3925 65.275 64.634 66.026 0 0 0 0 0.030565 1 32715 58.917 24.093 1 NaN NaN 0 14520000 14520000 0 + 40044 1150 15100 15506 62832 62832 YETIHLTEEPTK 12 1 0 Unmodified _YETIHLTEEPTK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 490.2526 3 487.580435 1459.71947 NaN NaN NaN 2.4337 0.0011866 NaN NaN NaN NaN 49.465 0.53001 49.465 49.171 49.701 0 0 0 0 0.0091358 2 27137 47.429 34.292 1 NaN NaN 0 22714000 0 22714000 40045 878 15101 15507 62833;62834 62834 YETIHLTEEPTK 12 1 0 Unmodified _YETIHLTEEPTK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 490.2515 3 487.580435 1459.71947 85721.63 0.34871 0.00017003 -0.69777 -0.00034022 -0.34906 -0.0001702 487.579995884066 490.58573653366 48.082 0.75084 48.082 47.671 48.422 3.8147E-06 156 53 5 0 0 0 0.02685 2 26899 26.532 26.532 1 0.63872 0.64383 0 26993000 12576000 14417000 40046 878 15101 15507 62835;62836 62835 YETIHLTEEPTK 12 1 0 Unmodified _YETIHLTEEPTK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.8696 2 730.867014 1459.71947 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.168 1 48.168 47.668 48.668 3.8147E-06 0 0 0 0.025299 1 26909 48.44 33.296 1 40047 878 15101 15507 62837 62837 YETIHLTEEPTK 12 1 0 Unmodified _YETIHLTEEPTK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 734.8755 2 730.867014 1459.71947 NaN NaN NaN 2.0897 0.0015273 NaN NaN NaN NaN 57.705 0.53112 57.705 57.471 58.002 0 0 0 0 0.0012048 1 28625 80.706 62.842 1 NaN NaN 0 2690100 0 2690100 40048 878 15101 15507 62838 62838 YETIHLTEEPTK 12 1 0 Unmodified _YETIHLTEEPTK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.3694 2 730.867014 1459.71947 NaN NaN NaN 0.14396 0.00010521 NaN NaN NaN NaN 57.741 0.28726 57.741 57.591 57.878 0 0 0 0 0.0021631 1 28686 69.786 63.751 1 NaN NaN 0 1203200 1203200 0 40049 878 15101 15507 62839 62839 YETVIMPVFGIATPFHIATIK 21 1 0 Unmodified _YETVIMPVFGIATPFHIATIK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 783.7598 3 783.428947 2347.26501 NaN NaN NaN -4.1738 -0.0032699 NaN NaN NaN NaN 133.29 0.34929 133.29 133.04 133.39 0 0 0 0 1.7328E-06 2 87226 59.469 50.76 1 NaN NaN 0 6142700 6142700 0 40050 2148 15102 15508 62840;62841 62840 YETVIMPVFGIATPFHIATIK 21 1 0 Oxidation (M) _YETVIM(ox)PVFGIATPFHIATIK_ YETVIM(1)PVFGIATPFHIATIK YETVIM(76.77)PVFGIATPFHIATIK 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 789.0949 3 788.760585 2363.25993 NaN NaN NaN -1.1312 -0.00089227 NaN NaN NaN NaN 126.52 1.0826 126.52 125.97 127.06 0 0 0 0 1.0825E-08 1 84207 76.768 73.886 1 NaN NaN 0 5385500 5385500 0 40051 2148 15102 15509 62842 62842 1993 YEVGLPTLCCLK 12 1 0 Unmodified _YEVGLPTLCCLK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.8644 2 726.864905 1451.71526 NaN NaN NaN -0.071357 -5.1867E-05 NaN NaN NaN NaN 106.86 0.6433 106.86 106.58 107.22 0 0 0 0 4.1893E-05 1 66335 96.342 82.135 1 NaN NaN 0 12163000 12163000 0 40052 1942 15103 15510 62843 62843 YEVGLPTLCCLK 12 1 0 Unmodified _YEVGLPTLCCLK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.8652 2 726.864905 1451.71526 NaN NaN NaN -0.065008 -4.7252E-05 NaN NaN NaN NaN 106.15 0.47292 106.15 105.95 106.42 0 0 0 0 0.00010458 1 67565 92.538 74.227 1 NaN NaN 0 15377000 15377000 0 40053 1942 15103 15510 62844 62844 YEVGLPTLCCLK 12 1 0 Unmodified _YEVGLPTLCCLK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 726.8656 2 726.864905 1451.71526 69233.71 0.91864 0.00066773 -0.37002 -0.00026895 0.54862 0.00039878 726.865035537729 730.871881179822 118.26 0.47348 118.26 118.02 118.49 0 115 18 8 0 0 0 0.00022091 2 69831 83 78.75 1 1.3594 1.0937 0 21865000 8798500 13067000 40054 1942 15103 15510 62845;62846 62846 YEVGLPTLCCLK 12 1 0 Unmodified _YEVGLPTLCCLK_ 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 730.8729 2 726.864905 1451.71526 68263.84 0.62939 0.00045748 -0.31614 -0.00022979 0.31325 0.00022769 726.864872037482 730.871927483973 118.06 0.58144 118.06 117.84 118.43 0 133 25 8 0 0 0 0.00018073 2 68696 74.841 70.687 1 1.4361 1.1509 0 19739000 7999400 11740000 40055 1942 15103 15510 62847;62848 62847 YEVLENK 7 1 0 Unmodified _YEVLENK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 451.7387 2 447.732 893.449448 90376.56 0.19002 8.508E-05 0.062084 2.7797E-05 0.25211 0.00011288 447.731974745003 451.739027556831 30.101 0.58714 30.101 29.954 30.541 0 194 51 6 0 0 0 0.026792 2 14610 81.784 28.23 1 0.87372 0.98602 0 134610000 71831000 62784000 40056 69 15104 15511 62849;62850 62849 YEVLENK 7 1 0 Unmodified _YEVLENK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.7389 2 447.732 893.449448 90421.46 0.44151 0.00019768 0.3471 0.00015541 0.78861 0.00035309 447.732042461803 451.739116527063 29.688 0.45419 29.688 29.491 29.945 0 175 33 8 0 0 0 0.012142 2 14282 106.42 37.931 1 0.86151 0.99412 0 189100000 109100000 80006000 40057 69 15104 15511 62851;62852 62851 YEVLENK 7 1 0 Unmodified _YEVLENK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 447.7318 2 447.732 893.449448 91358.8 0.24425 0.00010936 -0.043967 -1.9685E-05 0.20028 8.9673E-05 447.731914176967 451.738995105865 33.924 0.68655 33.924 33.721 34.407 0 255 61 8 0 0 0 0.031506 2 14888 67.032 21.638 1 1.8414 1.5267 0 45107000 16390000 28718000 40058 69 15104 15511 62853;62854 62854 YEVLENK 7 1 0 Unmodified _YEVLENK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;B3KM27 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 451.7391 2 447.732 893.449448 90945.13 0.055806 2.4986E-05 0.090681 4.0601E-05 0.14649 6.5587E-05 447.731941881833 451.73904827529 34.025 0.89281 34.025 33.814 34.707 0 281 72 7 0 0 0 0.028834 2 14426 71.296 25.936 1 1.8332 1.5136 0 31117000 11108000 20009000 40059 69 15104 15511 62855;62856 62855 YEWDVAEAR 9 0 1 Unmodified _YEWDVAEAR_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 574.7667 2 569.76182 1137.50909 79917.6 0.34586 0.00019706 0.28558 0.00016271 0.63144 0.00035977 569.761899772264 574.765970292964 64.913 1.0331 64.913 64.592 65.625 0 392 92 8 0 0 0 0.0010561 2 37264 90.601 86.191 1 2.4452 2.6724 0 52317000 13875000 38443000 40060 1478 15105 15512 62857;62858 62857 YEWDVAEAR 9 0 1 Unmodified _YEWDVAEAR_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.766 2 569.76182 1137.50909 80385.3 0.56786 0.00032355 0.31507 0.00017951 0.88293 0.00050306 569.762047071043 574.76596138183 63.796 0.96162 63.796 63.437 64.399 0 372 87 7 0 0 0 0.010772 1 37470 58.981 55.725 1 2.8822 3.3323 0 56371000 14127000 42244000 40061 1478 15105 15512 62859 62859 YEWDVAEAR 9 0 1 Unmodified _YEWDVAEAR_ 0 0 0 P13639;Q8TA90;B4DPU3;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 574.766 2 569.76182 1137.50909 80350.23 0.36271 0.00020666 0.36914 0.00021032 0.73186 0.00041698 569.762006372387 574.765981484608 75.123 0.7674 75.123 74.71 75.477 0 228 52 7 0 0 0 0.034581 1 39106 44.203 41.605 1 2.2213 1.864 0 4856200 1543200 3313000 40062 1478 15105 15512 62860 62860 YFDPANGK 8 1 0 Unmodified _YFDPANGK_ 0 0 0 P13639;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 460.2236 2 456.216517 910.418482 90391.15 0.22539 0.00010283 0.2117 9.6579E-05 0.43709 0.00019941 456.216433958888 460.223658018455 29.582 0.26683 29.582 29.439 29.706 0 69 21 5 0 0 0 0.0068778 2 14301 85.359 78.624 1 3.2398 3.541 0 51184000 9867100 41317000 40063 1478 15106 15513 62861;62862 62861 YFDPANGK 8 1 0 Unmodified _YFDPANGK_ 0 0 0 P13639;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.2234 2 456.216517 910.418482 89344.84 0.34822 0.00015887 -0.11932 -5.4437E-05 0.2289 0.00010443 456.216288237314 460.223451068982 29.105 0.22608 29.105 29.004 29.23 0 44 13 5 0 0 0 0.001718 2 13948 106.42 99.195 1 3.5673 4.0106 0 72801000 13326000 59475000 40064 1478 15106 15513 62863;62864 62863 YFDPANGK 8 1 0 Unmodified _YFDPANGK_ 0 0 0 P13639;Q6PK56;B4DRE8;B4DMC6 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 460.223 2 456.216517 910.418482 91766.82 0.24716 0.00011276 -0.44294 -0.00020207 -0.19578 -8.9316E-05 456.216196183057 460.223131406197 33.414 0.30926 33.414 33.241 33.55 0 61 26 4 0 0 0 0.057022 1 14596 41.188 37.796 1 2.33 1.8303 0 3145900 842110 2303800 40065 1478 15106 15513 62865 62865 YFEGVSPK 8 1 0 Unmodified _YFEGVSPK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.7345 2 463.734543 925.454533 88460.74 0.22535 0.0001045 0.24371 0.00011302 0.46906 0.00021752 463.73458596971 467.741837803803 40.807 0.69402 40.807 40.587 41.281 0 228 58 7 0 0 0 0.024949 2 21371 55.531 47.859 1 0.74299 0.83582 0 71792000 40246000 31546000 40066 1665 15107 15514 62866;62867 62867 YFEGVSPK 8 1 0 Unmodified _YFEGVSPK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 463.7348 2 463.734543 925.454533 86673.39 0.60643 0.00028122 -0.39306 -0.00018228 0.21337 9.8945E-05 463.734412427402 467.74165881317 39.688 0.58102 39.688 39.519 40.1 0 200 48 7 0 0 0 0.0087497 2 21029 77.282 61.784 1 0.66635 0.74473 0 97399000 51790000 45609000 40067 1665 15107 15514 62868;62869 62868 YFEGVSPK 8 1 0 Unmodified _YFEGVSPK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 467.7415 2 463.734543 925.454533 89882.48 0.11735 5.4421E-05 0.15417 7.1493E-05 0.27152 0.00012591 463.734487256732 467.741633394395 46.452 0.64847 46.452 46.185 46.833 0 182 39 8 0 0 0 0.028561 1 22402 53.166 48.81 1 0.36198 0.2865 0 10453000 7518900 2934100 40068 1665 15107 15514 62870 62870 YFEGVSPK 8 1 0 Unmodified _YFEGVSPK_ 0 0 0 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 467.7416 2 463.734543 925.454533 89233.62 -0.12864 -5.9657E-05 0.3775 0.00017506 0.24886 0.0001154 463.734548800648 467.741664992264 46.475 0.69662 46.475 46.249 46.945 3.8147E-06 188 41 9 0 0 0 0.028561 1 21802 53.166 48.81 1 0.36336 0.29804 0 8899900 6599300 2300700 40069 1665 15107 15514 62871 62871 YFEIQFSPGGEPDGGK 16 1 0 Unmodified _YFEIQFSPGGEPDGGK_ 0 0 0 Q4KMR3;Q12965;H0YLJ4 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 864.4006 2 864.399209 1726.78387 60621.88 0.92204 0.00079701 -0.33657 -0.00029093 0.58547 0.00050608 864.900816947035 868.405590881839 97.894 0.48618 97.894 97.615 98.101 0 165 39 6 0 0 0 0.00015217 1 59820 65.179 65.179 1 1.0161 0.99612 0 20738000 10733000 10005000 40070 1703 15108 15515 62872 62872 YFEIQFSPGGEPDGGK 16 1 0 Unmodified _YFEIQFSPGGEPDGGK_ 0 0 0 Q4KMR3;Q12965;H0YLJ4 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 864.4008 2 864.399209 1726.78387 55402.23 0.9662 0.00083518 0.58233 0.00050336 1.5485 0.0013385 864.400262635528 868.406399982328 97.113 0.51933 97.113 96.878 97.398 -7.6294E-06 179 41 6 0 0 0 4.1375E-12 2 60659 117.03 117.03 1 0.94152 1.0132 0 22758000 12817000 9941300 40071 1703 15108 15515 62873;62874 62874 YFEIQFSPGGEPDGGK 16 1 0 Unmodified _YFEIQFSPGGEPDGGK_ 0 0 0 Q4KMR3;Q12965;H0YLJ4 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 868.9077 2 864.399209 1726.78387 NaN NaN NaN 0.25265 0.00021839 NaN NaN NaN NaN 110.46 0.37688 110.46 110.19 110.56 -7.6294E-06 0 0 0 0.00022944 1 63747 70.488 64.385 1 NaN NaN 0 4125100 0 4125100 40072 1703 15108 15515 62875 62875 YFEIQFSPGGEPDGGK 16 1 0 Unmodified _YFEIQFSPGGEPDGGK_ 0 0 0 Q4KMR3;Q12965;H0YLJ4 Q4KMR3 Q4KMR3 MYO1E Unconventional myosin-Ie MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 868.4063 2 864.399209 1726.78387 60266.97 0.54239 0.00046884 -0.8603 -0.00074364 -0.31791 -0.0002748 864.900263941693 868.405643248445 110.4 0.38899 110.4 110.1 110.49 0 73 20 5 0 0 0 0.00033821 1 62747 53.448 47.841 1 1.8287 1.5003 0 5137800 1372800 3765000 40073 1703 15108 15515 62876 62876 YFEITDESPYVHYLNTFSSK 20 1 0 Unmodified _YFEITDESPYVHYLNTFSSK_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 817.0562 3 814.049629 2439.12706 68837.48 0.92278 0.00075119 -0.31404 -0.00025565 0.60874 0.00049554 814.382943718897 817.055205404576 113.42 0.72385 113.42 113.16 113.89 -7.6294E-06 202 53 6 0 0 0 3.6136E-07 2 71841 76.704 76.704 1 3.5086 3.625 0 29114000 6670200 22444000 40074 340 15109 15516 62877;62878 62877 YFEITDESPYVHYLNTFSSK 20 1 0 Unmodified _YFEITDESPYVHYLNTFSSK_ 0 0 0 Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4;B4DMH3;B4E3S0;B7Z9V0 Q53G58 Q53G58 CORO1C Coronin;Coronin-1C MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.0556 3 814.049629 2439.12706 68499.05 0.72424 0.00058956 -0.002895 -2.3567E-06 0.72134 0.00058721 814.718227798802 817.055352146803 112.76 0.57825 112.76 112.5 113.08 -7.6294E-06 161 38 6 0 0 0 2.7854E-13 1 73087 104.06 104.06 1 3.0178 3.3114 0 41303000 9908700 31394000 40075 340 15109 15516 62879 62879 YFGGCPVIK 9 1 0 Unmodified _YFGGCPVIK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.7727 2 520.76532 1039.51609 89066.38 0.54148 0.00028199 -0.53707 -0.00027969 0.0044125 2.2979E-06 521.265932773845 524.771683665057 59.71 0.29633 59.71 59.566 59.862 3.8147E-06 70 23 4 0 0 0 0.023203 1 34017 48.756 38.845 1 1.227 1.2826 0 15083000 7741700 7340800 40076 122 15110 15517 62880 62880 YFGGCPVIK 9 1 0 Unmodified _YFGGCPVIK_ 0 0 0 H7BXY3;A0A024R2T6;Q7L2E3 H7BXY3 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.7732 2 520.76532 1039.51609 86149.45 0.60799 0.00031662 0.62589 0.00032594 1.2339 0.00064256 520.766314459558 524.772186617598 58.448 0.28779 58.448 58.3 58.588 0 59 21 4 0 0 0 0.015684 1 34000 54.549 44.52 1 1.1173 1.1153 0 15010000 6141000 8868600 40077 122 15110 15517 62881 62881 YFLASLDR 8 0 1 Unmodified _YFLASLDR_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.7654 2 492.761092 983.507631 87956.92 0.26403 0.0001301 0.27672 0.00013636 0.54075 0.00026646 492.761241767795 497.765352857091 92.566 0.56429 92.566 92.249 92.814 0 78 27 4 0 0 0 0.051374 1 51587 43.246 31.878 1 1.6296 1.4458 0 1551600 637860 913780 40078 765 15111 15518 62882 62882 YFLASLDR 8 0 1 Unmodified _YFLASLDR_ 0 0 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 497.7656 2 492.761092 983.507631 89781.8 -0.018856 -9.2914E-06 0.019413 9.566E-06 0.00055729 2.7461E-07 492.761075524422 497.765266968691 92.402 0.60704 92.402 92.072 92.679 0 86 29 4 0 0 0 0.061251 1 50690 39.646 34.166 1 1.8143 1.5691 0 1200300 496310 703990 40079 765 15111 15518 62883 62883 YFLVGAGAIGCELLK 15 1 0 Unmodified _YFLVGAGAIGCELLK_ 0 0 0 A0A024R1A3;P22314 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 805.9347 2 805.934176 1609.8538 NaN NaN NaN 0.13018 0.00010492 NaN NaN NaN NaN 121.87 0.2964 121.87 121.72 122.02 0 0 0 0 0.0043571 1 78816 57.836 42.864 1 NaN NaN 0 2442600 2442600 0 40080 74 15112 15519 62884 62884 YFLVGAGAIGCELLK 15 1 0 Unmodified _YFLVGAGAIGCELLK_ 0 0 0 A0A024R1A3;P22314 A0A024R1A3 A0A024R1A3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 805.9354 2 805.934176 1609.8538 78528.2 1.185 0.00095507 -1.0174 -0.00081997 0.16764 0.0001351 806.434344296751 809.940505850023 134.07 0.21066 134.07 133.98 134.19 0 35 11 5 0 0 0 0.019064 1 80858 31.597 31.597 1 1.1813 0.97793 0 1651300 778690 872620 40081 74 15112 15519 62885 62885 YFPTQALNFAFK 12 1 0 Unmodified _YFPTQALNFAFK_ 0 0 0 Q6I9V5;Q59EI9;P12236;A0A0S2Z359;V9GYG0;A8K787;A0A0S2Z3H3;P12235;Q9H0C2;Q59EP7 Q6I9V5 Q6I9V5 SLC25A6;SLC25A4;SLC25A31 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.882 2 723.874445 1445.73434 NaN NaN NaN 0.58272 0.00042182 NaN NaN NaN NaN 117.44 0.49512 117.44 117.2 117.69 0 0 0 0 0.0070871 1 75124 59.153 40.373 1 NaN NaN 0 8667700 0 8667700 40082 1474 15113 15520 62886 62886 YFPTQALNFAFK 12 1 0 Unmodified _YFPTQALNFAFK_ 0 0 0 Q6I9V5;Q59EI9;P12236;A0A0S2Z359;V9GYG0;A8K787;A0A0S2Z3H3;P12235;Q9H0C2;Q59EP7 Q6I9V5 Q6I9V5 SLC25A6;SLC25A4;SLC25A31 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.3771 2 723.874445 1445.73434 NaN NaN NaN -0.79627 -0.0005764 NaN NaN NaN NaN 117.43 0.60435 117.43 117.07 117.67 0 0 0 0 0.0017096 1 75231 85.731 71.064 1 NaN NaN 0 8853000 8853000 0 40083 1474 15113 15520 62887 62887 YFPTQALNFAFK 12 1 0 Unmodified _YFPTQALNFAFK_ 0 0 0 Q6I9V5;Q59EI9;P12236;A0A0S2Z359;V9GYG0;A8K787;A0A0S2Z3H3;P12235;Q9H0C2;Q59EP7 Q6I9V5 Q6I9V5 SLC25A6;SLC25A4;SLC25A31 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 723.8743 2 723.874445 1445.73434 73422.04 0.70547 0.00051067 -0.017577 -1.2724E-05 0.68789 0.00049794 724.37574713315 727.881828668773 116.84 0.49796 116.84 116.6 117.1 0 151 30 7 0 0 0 0.00018337 2 76552 75.378 75.378 1 0.72694 0.7512 0 18462000 10051000 8410800 40084 1474 15113 15520 62888;62889 62889 YFPTQALNFAFK 12 1 0 Unmodified _YFPTQALNFAFK_ 0 0 0 Q6I9V5;Q59EI9;P12236;A0A0S2Z359;V9GYG0;A8K787;A0A0S2Z3H3;P12235;Q9H0C2;Q59EP7 Q6I9V5 Q6I9V5 SLC25A6;SLC25A4;SLC25A31 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.8748 2 723.874445 1445.73434 71055.8 0.83541 0.00060473 0.24566 0.00017782 1.0811 0.00078256 723.874719532587 727.881243177617 129.36 0.53059 129.36 129.14 129.67 0 116 24 8 0 0 0 0.0036249 2 78289 55.567 55.567 1 0.81422 0.64626 0 6479300 3584600 2894700 40085 1474 15113 15520 62890;62891 62891 YFPTQALNFAFK 12 1 0 Unmodified _YFPTQALNFAFK_ 0 0 0 Q6I9V5;Q59EI9;P12236;A0A0S2Z359;V9GYG0;A8K787;A0A0S2Z3H3;P12235;Q9H0C2;Q59EP7 Q6I9V5 Q6I9V5 SLC25A6;SLC25A4;SLC25A31 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 723.8751 2 723.874445 1445.73434 71934.41 1.004 0.00072678 0.49642 0.00035935 1.5004 0.0010861 724.377125754224 727.881294260817 129.19 0.86722 129.19 128.59 129.46 0 134 36 8 0 0 0 0.00081867 2 77209 65.347 65.347 1 0.80069 0.65169 0 6947400 4465000 2482400 40086 1474 15113 15520 62892;62893 62893 YFQFQEEGK 9 1 0 Unmodified _YFQFQEEGK_ 0 0 0 Q9BXV5;Q53R19;O15144;A0A024R408 Q9BXV5 Q9BXV5 ARPC2 Actin-related protein 2/3 complex subunit 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 592.2784 2 588.272021 1174.52949 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.66 1 53.66 53.16 54.16 0 0 0 0 0.040745 1 30667 49.554 41.908 1 40087 1375 15114 15521 62894 62894 YFQIGTIVDNPADFYHSR 18 0 1 Unmodified _YFQIGTIVDNPADFYHSR_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.6842 3 715.012961 2142.01705 71333.21 1.2323 0.00088112 0.46524 0.00033265 1.6976 0.0012138 715.347084755765 718.349816900213 110.63 1.3245 110.63 110.12 111.44 0 510 92 10 0 0 0 3.5541E-08 2 69411 82.449 82.449 1 1.0799 1.2028 0 81016000 40551000 40466000 40088 1813 15115 15522 62895;62896 62896 YFQIGTIVDNPADFYHSR 18 0 1 Unmodified _YFQIGTIVDNPADFYHSR_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.6837 3 715.012961 2142.01705 71556.73 0.90264 0.0006454 0.74909 0.00053561 1.6517 0.001181 715.347226120367 718.68423099189 109.89 0.97078 109.89 109.5 110.47 0 448 63 11 0 0 0 3.122E-06 2 70495 69.148 69.148 1 1.3964 1.5945 0 147570000 65249000 82325000 40089 1813 15115 15522 62897;62898 62897 YFQIGTIVDNPADFYHSR 18 0 1 Unmodified _YFQIGTIVDNPADFYHSR_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 715.3486 3 715.012961 2142.01705 71293.12 0.88217 0.00063076 0.59324 0.00042417 1.4754 0.0010549 715.347568037426 718.349628525844 120.97 0.86627 120.97 120.72 121.58 7.6294E-06 275 40 12 0 0 0 1.683E-08 2 71852 94.384 94.384 1 1.8223 1.5713 0 72447000 26176000 46271000 40090 1813 15115 15522 62899;62900 62900 YFQIGTIVDNPADFYHSR 18 0 1 Unmodified _YFQIGTIVDNPADFYHSR_ 0 0 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 718.6838 3 715.012961 2142.01705 71691.66 0.8327 0.00059539 0.55278 0.00039524 1.3855 0.00099063 715.347499374244 718.68383797134 120.77 1.1008 120.77 120.43 121.53 0 318 56 12 0 0 0 3.6329E-17 2 70770 105.77 105.77 1 1.7439 1.5217 0 65335000 24133000 41201000 40091 1813 15115 15522 62901;62902 62902 YFQSPSR 7 0 1 Unmodified _YFQSPSR_ 0 0 0 Q16629;H7BZZ6 Q16629 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 442.7167 2 442.716685 883.418816 NaN NaN NaN 0.33016 0.00014617 NaN NaN NaN NaN 23.389 0.47661 23.389 23.145 23.622 0 0 0 0 0.012636 1 9285 107.43 90.503 1 NaN NaN 0 22079000 22079000 0 40092 1772 15116 15523 62903 62903 YFQSPSR 7 0 1 Unmodified _YFQSPSR_ 0 0 0 Q16629;H7BZZ6 Q16629 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 442.7167 2 442.716685 883.418816 92095.16 -0.15067 -6.6704E-05 0.38257 0.00016937 0.2319 0.00010267 442.716725570085 447.720909585245 23.139 0.36953 23.139 22.994 23.363 0 50 15 5 0 0 0 0.029075 1 9038 70.912 61.672 1 1.4816 1.4822 0 17016000 5392000 11624000 40093 1772 15116 15523 62904 62904 YFTVTCYSGYGDDEK 15 1 0 Unmodified _YFTVTCYSGYGDDEK_ 0 0 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 902.8707 2 902.872167 1803.72978 64592.72 0.46084 0.00041608 -0.18951 -0.0001711 0.27133 0.00024498 902.871954721843 906.879148720985 88.011 0.41735 88.011 87.803 88.22 0 110 25 6 0 0 0 0.03382 1 48425 25.914 25.914 1 1.086 0.8863 0 2643100 1184900 1458200 40094 1806 15117 15524 62905 62905 YFTVTCYSGYGDDEK 15 1 0 Unmodified _YFTVTCYSGYGDDEK_ 0 0 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 902.873 2 902.872167 1803.72978 64850.58 0.21939 0.00019808 0.68054 0.00061444 0.89993 0.00081252 903.374430526959 906.879896733113 88.166 0.45497 88.166 87.94 88.395 0 105 24 6 0 0 0 0.018045 2 47705 31.989 31.989 1 0.87815 0.70568 0 2487600 1362700 1124900 40095 1806 15117 15524 62906;62907 62907 YFVESCHPDVIQHLLQDPVIR 21 0 1 Unmodified _YFVESCHPDVIQHLLQDPVIR_ 0 0 0 G3V1S1;B3KTH1;B3KRG2;A8K359;P19447;Q53HW5;H7C309 G3V1S1 G3V1S1 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 642.5811 4 642.078421 2564.28458 82770.8 0.82905 0.00053231 -0.58028 -0.00037258 0.24877 0.00015973 642.326750295927 645.08231407037 121.5 0.43311 121.5 121.31 121.74 0 56 24 6 0 0 0 0.007223 1 71433 27.055 23.957 1 0.46367 0.40462 0 2587000 1549300 1037700 40096 717 15118 15525 62908 62908 YGADALR 7 0 1 Unmodified _YGADALR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 383.1983 2 383.198128 764.381703 99621.38 -0.096259 -3.6886E-05 0.45155 0.00017303 0.35529 0.00013615 383.198150088555 388.202184757546 27.037 0.55746 27.037 26.738 27.295 -1.9073E-06 115 32 6 0 0 0 0.03394 2 12357 63.148 22.586 1 1.3999 1.4433 0 24378000 9304100 15074000 40097 1561 15119 15526 62909;62910 62910 YGAEVISVLQK 11 1 0 Unmodified _YGAEVISVLQK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2;B7Z8C1 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 603.8094 2 603.840071 1205.66559 80419.93 0.75303 0.00045471 1.1532 0.00069635 1.9062 0.0011511 603.840876774077 607.847612090288 85.619 0.53076 85.619 85.328 85.859 7.6294E-06 127 42 4 0 0 0 0.02478 1 51459 68.893 51.029 1 0.60647 0.60093 0 8248800 4477200 3771600 40098 873 15120 15527 62911 62911 YGAEVISVLQK 11 1 0 Unmodified _YGAEVISVLQK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2;B7Z8C1 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 603.8093 2 603.840071 1205.66559 78120.13 0.51528 0.00031115 0.67134 0.00040538 1.1866 0.00071653 603.840585550538 607.847504393727 84.713 0.5919 84.713 84.353 84.945 0 164 49 5 0 0 0 0.025466 1 52118 61.56 40.096 1 0.66564 0.71445 0 21401000 16004000 5397400 40099 873 15120 15527 62912 62912 YGAEVISVLQK 11 1 0 Unmodified _YGAEVISVLQK_ 0 0 0 B2RAN0;P54132;H0YNU5;B7ZKN7;B7Z2X2;B7Z8C1 B2RAN0 B2RAN0 BLM Bloom syndrome protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.8404 2 603.840071 1205.66559 79776.69 0.51338 0.00031 1.0304 0.00062222 1.5438 0.00093222 603.840486748772 607.847492130072 97.771 0.52079 97.771 97.563 98.084 0 101 31 4 0 0 0 0.025653 1 54245 41.117 31.783 1 1.291 1.0455 0 2592000 1155600 1436300 40100 873 15120 15527 62913 62913 YGALVICETSEQK 13 1 0 Unmodified _YGALVICETSEQK_ 0 0 0 E5KS95;P43897;B4DHY8 E5KS95 E5KS95 TSFM Elongation factor Ts, mitochondrial MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 749.3643 2 749.366324 1496.71809 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.474 1 65.474 64.974 65.974 0 0 0 0 0.016064 1 37706 50.194 36.841 1 40101 1208 15121 15528 62914 62914 YGASLLHTYAGPSLLVLGPR 20 0 1 Unmodified _YGASLLHTYAGPSLLVLGPR_ 0 0 0 A0A0D9SFK2;A0A024QZ63;Q92614;B4E0T8;H0YEV9 A0A0D9SFK2 A0A0D9SFK2 MYO18A;hCG_27198 Unconventional myosin-XVIIIa MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 699.0578 3 695.72123 2084.14186 76169.42 0.72119 0.00050175 0.33188 0.0002309 1.0531 0.00073264 695.721567289937 699.057574923402 126.62 0.40955 126.62 126.42 126.83 7.6294E-06 40 14 5 0 0 0 0.039096 1 76204 13.888 13.888 1 1.9068 1.6812 0 1405700 494570 911150 40102 12 15122 15529 62915 62915 YGCEGPSHGGLPGASSEK 18 1 0 Unmodified _YGCEGPSHGGLPGASSEK_ 0 0 0 Q00653;A0A1P8C958;D3DR86 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.9377 3 597.26518 1788.77371 80420.52 0.72356 0.00043216 1.1533 0.0006888 1.8768 0.001121 597.265122973452 599.936932575479 27.39 0.26043 27.39 27.233 27.494 -1.9073E-06 41 13 5 0 0 0 0.010956 1 12660 22.809 20.667 1 1.9464 2.0094 0 10978000 2897200 8081000 40103 1674 15123 15530 62916 62916 YGCEGPSHGGLPGASSEK 18 1 0 Unmodified _YGCEGPSHGGLPGASSEK_ 0 0 0 Q00653;A0A1P8C958;D3DR86 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 600.2708 3 597.26518 1788.77371 78776.37 1.1119 0.00066409 -0.41252 -0.00024639 0.69936 0.00041771 597.599479151212 599.936649562749 26.795 0.23105 26.795 26.674 26.905 -1.9073E-06 42 10 6 0 0 0 0.00025355 1 12197 40.384 39.079 1 2.5489 2.5717 0 13299000 3817800 9480800 40104 1674 15123 15530 62917 62917 YGCEGPSHGGLPGASSEK 18 1 0 Unmodified _YGCEGPSHGGLPGASSEK_ 0 0 0 Q00653;A0A1P8C958;D3DR86 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.4014 2 895.394132 1788.77371 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.829 1 26.829 26.329 27.329 0 0 0 0 0.046379 1 12205 37.013 29.102 1 40105 1674 15123 15530 62918 62918 YGCEGPSHGGLPGASSEK 18 1 0 Unmodified _YGCEGPSHGGLPGASSEK_ 0 0 0 Q00653;A0A1P8C958;D3DR86 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.9371 3 597.26518 1788.77371 76699.09 0.36645 0.00021887 0.30382 0.00018146 0.67027 0.00040033 597.26585802962 599.936621849854 31.552 0.38199 31.552 31.415 31.797 -1.9073E-06 74 21 9 0 0 0 0.024292 1 13344 19.553 19.553 1 2.0912 1.7512 0 1851700 720580 1131100 40106 1674 15123 15530 62919 62919 YGCEGPSHGGLPGASSEK 18 1 0 Unmodified _YGCEGPSHGGLPGASSEK_ 0 0 0 Q00653;A0A1P8C958;D3DR86 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 600.2703 3 597.26518 1788.77371 79282.41 0.6015 0.00035925 -0.68794 -0.00041088 -0.086439 -5.1627E-05 597.265006626554 600.270382933052 31.608 0.29041 31.608 31.486 31.777 0 64 15 6 0 0 0 0.009766 1 12940 23.1 23.1 1 1.6148 1.3459 0 1546400 606910 939470 40107 1674 15123 15530 62920 62920 YGDGIQLTR 9 0 1 Unmodified _YGDGIQLTR_ 0 0 0 P15924;Q4LE79;B4E2A0;Q6ZP16;G1UI31 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 512.2683 2 511.766906 1021.51926 83819.29 0.11791 6.0341E-05 0.23718 0.00012138 0.35509 0.00018172 511.766844181745 516.770981926711 50.336 0.47906 50.336 50.105 50.585 0 150 44 5 0 0 0 0.001341 2 27794 86.67 70.13 1 0.52499 0.54142 0 24280000 14954000 9325600 40108 1486 15124 15531 62921;62922 62921 YGDGIQLTR 9 0 1 Unmodified _YGDGIQLTR_ 0 0 0 P15924;Q4LE79;B4E2A0;Q6ZP16;G1UI31 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 511.7681 2 511.766906 1021.51926 NaN NaN NaN 1.0972 0.0005615 NaN NaN NaN NaN 49.041 0.50573 49.041 48.823 49.329 0 0 0 0 0.0015249 1 27643 85.67 51.873 1 NaN NaN 0 19201000 19201000 0 40109 1486 15124 15531 62923 62923 YGDGPRPPK 9 1 1 Unmodified _YGDGPRPPK_ 0 0 1 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 493.7566 2 493.756341 985.498129 84350.45 0.13236 6.5356E-05 -0.073773 -3.6426E-05 0.058591 2.893E-05 493.756306886565 502.76744891266 16.959 0.67641 16.959 16.63 17.307 0 122 21 8 0 0 0 0.0067703 2 4148 90.709 64.77 1 1.2118 1.4577 0 86878000 37383000 49495000 40110 1691 15125 15532 62924;62925 62925 YGDGPRPPK 9 1 1 Unmodified _YGDGPRPPK_ 0 0 1 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 335.5138 3 329.506653 985.498129 101272.4 -0.089319 -2.9431E-05 -0.092797 -3.0577E-05 -0.18212 -6.0008E-05 329.506542978033 335.514081013258 16.969 0.64668 16.969 16.66 17.307 0 106 20 8 0 0 0 0.043467 1 4117 31.422 27.835 1 1.1207 1.2875 0 26961000 13433000 13528000 40111 1691 15125 15532 62926 62926 YGDGPRPPK 9 1 1 Unmodified _YGDGPRPPK_ 0 0 1 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 502.7677 2 493.756341 985.498129 86250.78 0.45588 0.00022509 0.26384 0.00013027 0.71971 0.00035536 493.756393019757 502.767623921476 16.873 0.71247 16.873 16.536 17.248 0 123 25 8 0 0 0 0.00012148 2 3843 94.302 52.65 1 1.2564 1.4687 0 49992000 21856000 28136000 40112 1691 15125 15532 62927;62928 62928 YGDSLYR 7 0 1 Unmodified _YGDSLYR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 437.2083 2 437.208692 872.402832 92297.35 0.21931 9.5884E-05 -0.030394 -1.3289E-05 0.18891 8.2595E-05 437.20858303139 442.212775504782 32.311 0.82838 32.311 31.966 32.795 0 361 75 8 0 0 0 0.026873 1 15953 81.381 61.535 1 1.1388 1.3129 0 152220000 70005000 82211000 40113 1183 15126 15533 62929 62929 YGDSLYR 7 0 1 Unmodified _YGDSLYR_ 0 0 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2;O60747;Q5T3R7 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 437.2083 2 437.208692 872.402832 90964.5 0.38933 0.00017022 -0.44557 -0.00019481 -0.05624 -2.4589E-05 437.208355936873 442.21261132575 31.451 0.93344 31.451 31.252 32.185 0 362 85 8 0 0 0 0.024839 2 15568 89.673 65.701 1 1.1098 1.2623 0 117260000 52904000 64361000 40114 1183 15126 15533 62930;62931 62931 YGEPGEVFINK 11 1 0 Unmodified _YGEPGEVFINK_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.814 2 626.814053 1251.61355 75731.66 0.72735 0.00045592 0.22313 0.00013986 0.95049 0.00059578 626.814133113864 630.820968282916 68.012 0.67848 68.012 67.713 68.392 0 364 57 10 0 0 0 0.0012627 2 39286 68.846 62.178 1 1.5938 1.7198 0 41818000 15477000 26340000 40115 1510 15127 15534 62932;62933 62933 YGEPGEVFINK 11 1 0 Unmodified _YGEPGEVFINK_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.8215 2 626.814053 1251.61355 74312.32 0.56049 0.00035132 -0.14975 -9.3867E-05 0.41073 0.00025745 626.813974700502 630.820608891315 66.776 0.65195 66.776 66.545 67.197 0 282 56 8 0 0 0 0.00015138 2 39430 94.909 94.909 1 1.6482 1.8308 0 49870000 18375000 31495000 40116 1510 15127 15534 62934;62935 62934 YGEPGEVFINK 11 1 0 Unmodified _YGEPGEVFINK_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 630.8219 2 626.814053 1251.61355 78744.91 0.43181 0.00027066 0.066314 4.1566E-05 0.49812 0.00031223 626.813539469844 630.821002553459 77.713 0.55801 77.713 77.437 77.995 0 193 37 8 0 0 0 0.043879 1 41602 35.541 30.929 1 1.073 0.85062 0 4719200 2262500 2456700 40117 1510 15127 15534 62936 62936 YGEPGEVFINK 11 1 0 Unmodified _YGEPGEVFINK_ 0 0 0 Q9BSV4;Q86VG2;P23246;Q6PIX2 Q9BSV4 Q9BSV4 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 630.8215 2 626.814053 1251.61355 77905.47 0.63256 0.00039649 0.14325 8.9793E-05 0.77581 0.00048629 626.813754662954 630.820970201569 78.063 0.57959 78.063 77.735 78.315 0 161 36 7 0 0 0 0.019396 1 40992 44.309 44.309 1 1.1032 0.89681 0 4496300 2203200 2293100 40118 1510 15127 15534 62937 62937 YGEYFPGTGDLR 12 0 1 Unmodified _YGEYFPGTGDLR_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5TEE2;B4DSK9;B7Z3S4;Q92769;B3KUJ5 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.3211 2 687.819867 1373.62518 72796.27 0.37635 0.00025886 0.30214 0.00020782 0.67849 0.00046668 687.8200311558 692.824141575501 81.536 1.1421 81.536 81.102 82.244 0 548 98 8 0 0 0 0.00018487 2 48401 88.948 88.948 1 0.80402 0.94392 0 222180000 126140000 96043000 40119 1715;1952 15128 15535 62938;62939 62938 YGEYFPGTGDLR 12 0 1 Unmodified _YGEYFPGTGDLR_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5TEE2;B4DSK9;B7Z3S4;Q92769;B3KUJ5 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.3259 2 687.819867 1373.62518 73042.48 0.56326 0.00038742 0.13809 9.4984E-05 0.70136 0.00048241 687.819932623621 692.824046991997 80.485 1.2374 80.485 80.06 81.297 0 563 101 9 0 0 0 0.00023262 2 48856 85.377 85.377 1 0.79395 0.91149 0 188540000 103630000 84909000 40120 1715;1952 15128 15535 62940;62941 62941 YGEYFPGTGDLR 12 0 1 Unmodified _YGEYFPGTGDLR_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5TEE2;B4DSK9;B7Z3S4;Q92769;B3KUJ5 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.8203 2 687.819867 1373.62518 73672.8 0.54947 0.00037794 0.23877 0.00016423 0.78824 0.00054217 687.81994899796 692.824128867295 93.153 1.4297 93.153 92.831 94.261 0 472 94 10 0 0 0 0.0050737 2 51879 61.353 61.353 1 1.5777 1.3577 0 52628000 19506000 33122000 40121 1715;1952 15128 15535 62942;62943 62943 YGEYFPGTGDLR 12 0 1 Unmodified _YGEYFPGTGDLR_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5TEE2;B4DSK9;B7Z3S4;Q92769;B3KUJ5 Q6IT96;Q92769 Q6IT96 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.82 2 687.819867 1373.62518 73915.47 0.38713 0.00026628 0.26154 0.00017989 0.64867 0.00044617 687.819975699271 692.824141913329 93.12 1.2147 93.12 92.771 93.985 0 431 79 9 0 0 0 0.0010661 2 50992 66.056 66.056 1 1.5435 1.3463 0 41262000 15382000 25880000 40122 1715;1952 15128 15535 62944;62945 62945 YGGDEIPFSPYR 12 0 1 Unmodified _YGGDEIPFSPYR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 701.376 2 700.827692 1399.64083 NaN NaN NaN -0.13617 -9.5431E-05 NaN NaN NaN NaN 89.679 0.18757 89.679 89.573 89.76 0 0 0 0 0.0087083 1 54170 56.202 17.163 1 NaN NaN 0 5353400 5353400 0 40123 1504 15129 15536 62946 62946 YGGDEIPFSPYR 12 0 1 Unmodified _YGGDEIPFSPYR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.8331 2 700.827692 1399.64083 74239.9 0.85436 0.00059876 -0.33126 -0.00023216 0.5231 0.0003666 700.827351376637 705.831573990278 88.856 0.58346 88.856 88.612 89.195 0 143 48 4 0 0 0 0.0010354 2 54790 62.166 11.375 1 1.4057 1.4306 0 20512000 8393300 12119000 40124 1504 15129 15536 62947;62948 62947 YGIICMEDLIHEIYTVGK 18 1 0 Oxidation (M) _YGIICM(ox)EDLIHEIYTVGK_ YGIICM(1)EDLIHEIYTVGK YGIICM(46.13)EDLIHEIYTVGK 0 1 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 726.695 3 724.023481 2169.04861 71674.3 1.1172 0.00080892 -0.61024 -0.00044183 0.50701 0.00036708 724.357492336836 727.028964980323 115.78 0.53993 115.78 115.47 116.01 7.6294E-06 226 35 9 0 0 0 9.0142E-05 1 73632 46.131 46.131 1 1.8795 1.9153 0 17927000 7043200 10884000 40125 240 15130 15537 62949 62949 181 YGIICMEDLIHEIYTVGK 18 1 0 Oxidation (M) _YGIICM(ox)EDLIHEIYTVGK_ YGIICM(1)EDLIHEIYTVGK YGIICM(56.04)EDLIHEIYTVGK 0 1 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.3737 3 724.023481 2169.04861 71674.31 0.73775 0.00053415 -0.40525 -0.00029341 0.33251 0.00024074 724.023325532808 727.029021223482 116.17 0.53558 116.17 115.92 116.45 7.6294E-06 234 33 9 0 0 0 0.00025288 1 74119 56.039 56.039 1 2.2329 2.2347 0 26655000 8478300 18177000 40126 240 15130 15537 62950 62950 181 YGIICMEDLIHEIYTVGK 18 1 0 Oxidation (M) _YGIICM(ox)EDLIHEIYTVGK_ YGIICM(1)EDLIHEIYTVGK YGIICM(69.74)EDLIHEIYTVGK 0 1 0 A0A024R814;P18124;A8MUD9;O95036 A0A024R814 A0A024R814 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 727.0303 3 724.023481 2169.04861 71697.39 0.7353 0.00053237 -0.1216 -8.8044E-05 0.61369 0.00044433 724.357720900838 726.695001809921 115.14 0.41673 115.14 114.86 115.27 -7.6294E-06 199 27 9 0 0 0 6.2641E-06 1 74941 69.737 69.737 1 2.0247 2.0903 0 32808000 11350000 21458000 40127 240 15130 15537 62951 62951 181 YGISNEKPEVK 11 2 0 Unmodified _YGISNEKPEVK_ 0 0 1 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 421.8907 3 421.890832 1262.65067 92887.98 0.0014955 6.3094E-07 0.24345 0.00010271 0.24494 0.00010334 421.890742804673 427.233699161832 27.61 0.34947 27.61 27.467 27.816 0 122 24 8 0 0 0 0.0027033 2 12791 51.252 46.736 1 1.5283 1.8045 0 38225000 12376000 25849000 40128 46 15131 15538 62952;62953 62953 YGISNEKPEVK 11 2 0 Unmodified _YGISNEKPEVK_ 0 0 1 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 421.8911 3 421.890832 1262.65067 92361.23 0.21385 9.0222E-05 0.19598 8.2683E-05 0.40983 0.00017291 421.890639805271 427.233783435261 26.962 0.31042 26.962 26.822 27.132 1.9073E-06 71 13 7 0 0 0 0.00083589 2 12325 61.833 53.769 1 1.7894 2.0712 0 46561000 15419000 31143000 40129 46 15131 15538 62954;62955 62955 YGISNEKPEVK 11 2 0 Unmodified _YGISNEKPEVK_ 0 0 1 A0A024R0H6;Q8N7H5;B4DGJ5 A0A024R0H6 A0A024R0H6 PAF1 RNA polymerase II-associated factor 1 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3488 2 632.33261 1262.65067 NaN NaN NaN 1.0098 0.0006385 NaN NaN NaN NaN 26.962 0.24948 26.962 26.883 27.132 -1.9073E-06 0 0 0 0.016885 1 12361 84.31 65.039 1 NaN NaN 0 21783000 0 21783000 40130 46 15131 15538 62956 62956 YGLGYQLCDNSVGVLFNDSTR 21 0 1 Unmodified _YGLGYQLCDNSVGVLFNDSTR_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1195.0638 2 1189.55771 2377.10086 55939.88 0.27802 0.00033072 0.31455 0.00037418 0.59257 0.0007049 1189.55907071138 1195.06263527749 118.09 0.30598 118.09 117.93 118.23 7.6294E-06 80 17 6 0 0 0 9.5761E-05 2 75697 38.511 38.511 1 0.87005 0.90565 0 10482000 5996700 4485600 40131 1604 15132 15539 62957;62958 62957 YGLGYQLCDNSVGVLFNDSTR 21 0 1 Unmodified _YGLGYQLCDNSVGVLFNDSTR_ 0 0 0 P53350;B2R841;B4E083;Q59GD0;D3DWF3 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1;Serine/threonine-protein kinase PLK MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1195.0663 2 1189.55771 2377.10086 55376.18 0.40658 0.00048365 0.12886 0.00015328 0.53543 0.00063693 1190.05893232948 1195.06302486125 117.68 0.34944 117.68 117.5 117.85 -7.6294E-06 94 22 7 0 0 0 7.9829E-07 2 77225 55.841 51.537 1 0.78132 0.77376 0 12248000 7626000 4621600 40132 1604 15132 15539 62959;62960 62959 YGLIFHSTFIGR 12 0 1 Unmodified _YGLIFHSTFIGR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.2588 3 470.922467 1409.74557 88048.41 0.66509 0.0003132 -0.018923 -8.9114E-06 0.64616 0.00030429 470.922356979939 474.258520295026 96.573 1.7451 96.573 95.87 97.615 7.6294E-06 610 152 7 0 0 0 0.018796 2 58618 27.409 27.409 1 0.75262 0.86023 0 125860000 69191000 56672000 40133 785 15133 15540 62961;62962 62962 YGLIFHSTFIGR 12 0 1 Unmodified _YGLIFHSTFIGR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 474.5925 3 470.922467 1409.74557 NaN NaN NaN -0.36412 -0.00017147 NaN NaN NaN NaN 96.868 0.68436 96.868 96.797 97.481 0 0 0 0 0.00058511 1 59145 72.29 64.566 1 NaN NaN 0 20027000 0 20027000 40134 785 15133 15540 62963 62963 YGLIFHSTFIGR 12 0 1 Unmodified _YGLIFHSTFIGR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 710.8856 2 705.880062 1409.74557 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.348 1 96.348 95.848 96.848 0 0 0 0 0.041873 1 58693 43.512 13.703 1 40135 785 15133 15540 62964 62964 YGLIFHSTFIGR 12 0 1 Unmodified _YGLIFHSTFIGR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.2589 3 470.922467 1409.74557 88153.41 0.32099 0.00015116 -0.0097494 -4.5912E-06 0.31125 0.00014657 470.92236048139 474.258504032254 94.784 1.5995 94.784 94.232 95.831 0 725 135 10 0 0 0 5.5623E-05 4 58691 61.11 61.11 1 0.72508 0.82646 0 136300000 81340000 54958000 40136 785 15133 15540 62965;62966;62967;62968 62966 YGLIFHSTFIGR 12 0 1 Unmodified _YGLIFHSTFIGR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 474.2587 3 470.922467 1409.74557 88406.78 0.38478 0.0001812 -0.067995 -3.202E-05 0.31678 0.00014918 470.922394012912 474.25847326034 107.76 1.2821 107.76 107.47 108.76 0 402 67 10 0 0 0 0.0045804 3 61636 42.809 42.809 1 0.95694 0.82273 0 45274000 22111000 23163000 40137 785 15133 15540 62969;62970;62971 62969 YGLIFHSTFIGR 12 0 1 Unmodified _YGLIFHSTFIGR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 705.8807 2 705.880062 1409.74557 72535.28 0.82736 0.00058401 -0.24974 -0.00017629 0.57761 0.00040773 705.879881956956 710.883901870113 107.76 0.80888 107.76 107.5 108.31 0 183 43 8 0 0 0 0.012077 1 61707 43.512 43.512 1 0.93014 0.76231 0 12726000 6552600 6173000 40138 785 15133 15540 62972 62972 YGLIFHSTFIGR 12 0 1 Unmodified _YGLIFHSTFIGR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 471.2566 3 470.922467 1409.74557 87903.55 0.34361 0.00016181 -0.081776 -3.851E-05 0.26184 0.0001233 470.922369589994 474.258432765467 107.42 1.1968 107.42 107.13 108.33 -7.6294E-06 422 70 8 0 0 0 0.052516 2 60526 19.781 19.781 1 0.99725 0.86987 0 35401000 17467000 17934000 40139 785 15133 15540 62973;62974 62974 YGLIFHSTFIGR 12 0 1 Unmodified _YGLIFHSTFIGR_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 705.8812 2 705.880062 1409.74557 71976.27 0.60505 0.00042709 0.31373 0.00022145 0.91878 0.00064855 705.880154127139 710.884379214988 107.45 0.67718 107.45 107.19 107.87 0 221 43 7 0 0 0 0.0026027 2 60606 38.75 38.75 1 0.96958 0.78782 0 12242000 5865600 6376100 40140 785 15133 15540 62975;62976 62976 YGLIGLNGIGK 11 1 0 Unmodified _YGLIGLNGIGK_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63;C9JHK9;C9JZV3 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.8315 2 552.824224 1103.63389 NaN NaN NaN 0.96532 0.00053365 NaN NaN NaN NaN 96.454 0.56235 96.454 96.235 96.797 0 0 0 0 0.043706 1 58891 46.129 12.332 1 NaN NaN 0 7141200 0 7141200 40141 455 15134 15541 62977 62977 YGLIGLNGIGK 11 1 0 Unmodified _YGLIGLNGIGK_ 0 0 0 A0A090N7X1;A0A090N7Y2;Q9UG63;C9JHK9;C9JZV3 A0A090N7X1 A0A090N7X1 ABCF2 ATP-binding cassette sub-family F member 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.8298 2 552.824224 1103.63389 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.855 1 95.855 95.355 96.355 0 0 0 0 0.030447 1 59725 48.794 12.399 1 40142 455 15134 15541 62978 62978 YGLIYHASLVGQTSPK 16 1 0 Unmodified _YGLIYHASLVGQTSPK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 578.6457 3 578.64555 1732.91482 79482.17 0.61447 0.00035556 0.17913 0.00010366 0.7936 0.00045921 578.979958343675 581.317089448245 75.806 1.3257 75.806 75.448 76.774 -7.6294E-06 668 110 10 0 0 0 6.2949E-05 2 44476 59.673 49.923 1 0.76672 0.86348 0 123410000 67795000 55612000 40143 2129 15135 15542 62979;62980 62980 YGLIYHASLVGQTSPK 16 1 0 Unmodified _YGLIYHASLVGQTSPK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.9748 2 867.464687 1732.91482 66492.64 0.79872 0.00069286 -0.079323 -6.881E-05 0.7194 0.00062405 867.966031383842 871.973314670455 75.804 0.45403 75.804 75.558 76.012 0 143 39 6 0 0 0 0.00032676 1 44526 65.842 65.842 1 0.7153 0.74139 0 14774000 7688400 7085700 40144 2129 15135 15542 62981 62981 YGLIYHASLVGQTSPK 16 1 0 Unmodified _YGLIYHASLVGQTSPK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 867.9665 2 867.464687 1732.91482 66504.08 0.60261 0.00052274 -0.13996 -0.00012141 0.46265 0.00040133 867.965932347587 871.47190483056 74.131 0.56674 74.131 73.85 74.417 0 198 47 6 0 0 0 0.00015316 3 44447 85.845 79.742 1 0.71157 0.73834 0 24723000 14779000 9943900 40145 2129 15135 15542 62982;62983;62984 62983 YGLIYHASLVGQTSPK 16 1 0 Unmodified _YGLIYHASLVGQTSPK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.317 3 578.64555 1732.91482 79710.93 0.63712 0.00036867 -0.15687 -9.0773E-05 0.48025 0.00027789 578.645470774166 581.651116809899 74.133 0.92522 74.133 73.722 74.648 0 554 77 10 0 0 0 4.3131E-05 2 44450 76.151 76.151 1 0.7659 0.88657 0 206960000 112380000 94587000 40146 2129 15135 15542 62985;62986 62985 YGLIYHASLVGQTSPK 16 1 0 Unmodified _YGLIYHASLVGQTSPK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 578.6462 3 578.64555 1732.91482 79044.41 0.44034 0.0002548 0.36001 0.00020832 0.80035 0.00046312 578.980039290007 581.317052702271 86.16 1.1765 86.16 85.839 87.016 0 538 76 11 0 0 0 2.6086E-05 2 47120 80.738 80.738 1 0.99724 0.8527 0 69131000 33501000 35630000 40147 2129 15135 15542 62987;62988 62988 YGLIYHASLVGQTSPK 16 1 0 Unmodified _YGLIYHASLVGQTSPK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 867.4642 2 867.464687 1732.91482 65646.84 0.38419 0.00033327 0.095085 8.2483E-05 0.47928 0.00041576 867.464714042915 871.471946861475 86.179 0.63994 86.179 85.906 86.545 0 277 44 8 0 0 0 0.027968 1 47140 34.386 34.386 1 1.0026 0.78171 0 12173000 5759200 6413700 40148 2129 15135 15542 62989 62989 YGLIYHASLVGQTSPK 16 1 0 Unmodified _YGLIYHASLVGQTSPK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 578.9804 3 578.64555 1732.91482 78938.18 0.45289 0.00026207 0.20916 0.00012103 0.66206 0.0003831 578.979967731121 581.317019850594 86.063 1.1294 86.063 85.759 86.888 0 453 68 10 0 0 0 4.8055E-05 2 46244 74.141 74.141 1 1.0506 0.89019 0 62336000 32083000 30253000 40149 2129 15135 15542 62990;62991 62991 YGLIYHASLVGQTSPK 16 1 0 Unmodified _YGLIYHASLVGQTSPK_ 0 0 0 Q9Y2X3;B3KN82 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 871.4725 2 867.464687 1732.91482 65172.02 0.33317 0.00028901 0.1492 0.00012943 0.48237 0.00041844 867.464651843077 871.471918241548 86.065 0.58701 86.065 85.824 86.411 0 196 31 9 0 0 0 0.00073173 1 46263 43.613 43.613 1 1.0133 0.83265 0 12285000 6081300 6203200 40150 2129 15135 15542 62992 62992 YGLNMCR 7 0 1 Oxidation (M) _YGLNM(ox)CR_ YGLNM(1)CR YGLNM(53.71)CR 0 1 0 A0A087WTT6;P62273 A0A087WTT6 A0A087WTT6 RPS29 40S ribosomal protein S29 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.2066 2 465.20203 928.389507 88320.41 0.23364 0.00010869 -0.74067 -0.00034456 -0.50703 -0.00023587 465.201810672356 470.206146027221 23.845 0.33424 23.845 23.642 23.976 1.9073E-06 69 16 6 0 0 0 0.025659 1 9688 53.71 42.836 1 1.3547 1.3922 0 25371000 10299000 15072000 40151 405 15136 15543 62993 62993 295 YGLNMCR 7 0 1 Oxidation (M) _YGLNM(ox)CR_ YGLNM(1)CR YGLNM(77.72)CR 0 1 0 A0A087WTT6;P62273 A0A087WTT6 A0A087WTT6 RPS29 40S ribosomal protein S29 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 470.2063 2 465.20203 928.389507 88681.67 -0.26767 -0.00012452 -0.01114 -5.1822E-06 -0.27881 -0.0001297 465.202229179274 470.206221650416 23.798 0.31252 23.798 23.646 23.958 0 43 11 6 0 0 0 0.012956 1 9609 77.72 56.455 1 1.2869 1.2922 0 19116000 7804600 11312000 40152 405 15136 15543 62994 62994 295 YGMPPQDAFTTQWLVR 16 0 1 Oxidation (M) _YGM(ox)PPQDAFTTQWLVR_ YGM(1)PPQDAFTTQWLVR YGM(43.99)PPQDAFTTQWLVR 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 963.4702 2 963.464361 1924.91417 62302.73 0.64702 0.00062338 -0.08927 -8.6009E-05 0.55775 0.00053737 963.965315747569 968.468109302788 110.38 0.5768 110.38 110.07 110.65 0 190 41 6 0 0 0 0.00083189 1 69156 43.991 43.991 1 0.82559 0.85034 0 24675000 12862000 11813000 40153 515 15137 15544 62995 62995 380 YGMPPQDAFTTQWLVR 16 0 1 Oxidation (M) _YGM(ox)PPQDAFTTQWLVR_ YGM(1)PPQDAFTTQWLVR YGM(53.57)PPQDAFTTQWLVR 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 963.9665 2 963.464361 1924.91417 63011.27 0.53293 0.00051346 -0.12878 -0.00012407 0.40415 0.00038938 963.965768362151 968.97015530641 109.72 0.60394 109.72 109.45 110.06 0 226 39 9 0 0 0 0.0001626 2 70384 53.569 53.569 1 0.95713 1.0136 0 23727000 11106000 12621000 40154 515 15137 15544 62996;62997 62996 380 YGMPPQDAFTTQWLVR 16 0 1 Oxidation (M) _YGM(ox)PPQDAFTTQWLVR_ YGM(1)PPQDAFTTQWLVR YGM(42.1)PPQDAFTTQWLVR 0 1 0 F5GWX5;A0A0C4DGG9;Q14839;B3KY63 F5GWX5 F5GWX5 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 968.9692 2 963.464361 1924.91417 63409.91 0.27945 0.00026924 0.18537 0.0001786 0.46482 0.00044784 963.965869505772 968.97026869189 121.32 0.57151 121.32 121.13 121.7 7.6294E-06 138 31 7 0 0 0 0.0010461 1 71238 42.095 40.96 1 1.4234 1.1843 0 6139700 2560400 3579300 40155 515 15137 15544 62998 62998 380 YGMSPPGSVADK 12 1 0 Oxidation (M) _YGM(ox)SPPGSVADK_ YGM(1)SPPGSVADK YGM(60.06)SPPGSVADK 0 1 0 X6RJ73;Q96A35;X6RHI2;X6RIR5 X6RJ73 X6RJ73 MRPL24 39S ribosomal protein L24, mitochondrial MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 616.7891 2 612.781896 1223.54924 NaN NaN NaN NaN NaN NaN NaN NaN NaN 24.2 1 24.2 23.7 24.7 -1.9073E-06 0 0 0 0.0035355 1 9976 60.064 45.288 1 40156 1957 15138 15545 62999 62999 1807 YGPESLSEFTQWR 13 0 1 Unmodified _YGPESLSEFTQWR_ 0 0 0 A0A140VJD0;Q9UFC0;H7C5S6;Q59FT0;F8WDB4 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 800.3753 2 800.375537 1598.73652 68452.77 0.80695 0.00064586 0.029091 2.3283E-05 0.83604 0.00066915 800.876713431307 805.3800250099 118.41 0.58801 118.41 118 118.59 0 83 23 6 0 0 0 0.032717 1 69963 32.999 26.616 1 1.2753 1.1066 0 2426100 894320 1531800 40157 599 15139 15546 63000 63000 YGPIADVSIVYDQQSR 16 0 1 Unmodified _YGPIADVSIVYDQQSR_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 905.952 2 905.95214 1809.88973 63567.63 0.86877 0.00078706 -0.0068762 -6.2295E-06 0.86189 0.00078083 905.951975758077 910.956318019021 98.696 0.92666 98.696 98.292 99.218 0 579 75 10 0 0 0 0.00014825 2 60139 75.479 61.515 1 1.1389 1.3238 0 180860000 81641000 99220000 40158 889 15140 15547 63001;63002 63002 YGPIADVSIVYDQQSR 16 0 1 Unmodified _YGPIADVSIVYDQQSR_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 911.4583 2 905.95214 1809.88973 63687.86 0.65678 0.00059501 0.068931 6.2448E-05 0.72571 0.00065746 905.952080222281 910.956364173722 98.064 1.0187 98.064 97.613 98.631 0 583 86 9 0 0 0 1.763E-08 3 61105 102.66 94.937 1 1.1286 1.2958 0 189830000 88829000 101010000 40159 889 15140 15547 63003;63004;63005 63004 YGPIADVSIVYDQQSR 16 0 1 Unmodified _YGPIADVSIVYDQQSR_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 910.9571 2 905.95214 1809.88973 63347.03 0.68643 0.00062188 0.20421 0.000185 0.89064 0.00080688 905.952229879722 910.95644922412 111.29 0.62811 111.29 110.99 111.62 0 214 28 10 0 0 0 2.6627E-05 3 64365 85.554 77.83 1 0.85095 0.73182 0 47613000 25599000 22014000 40160 889 15140 15547 63006;63007;63008 63008 YGPIADVSIVYDQQSR 16 0 1 Unmodified _YGPIADVSIVYDQQSR_ 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 906.4535 2 905.95214 1809.88973 63597.01 0.42597 0.0003859 0.12049 0.00010915 0.54645 0.00049506 906.453716732037 910.956261170211 111.23 0.53912 111.23 110.93 111.47 0 202 25 10 0 0 0 1.4258E-12 2 63383 122.46 112.93 1 0.85736 0.74796 0 48412000 27023000 21389000 40161 889 15140 15547 63009;63010 63009 YGPIVDVYVPLDFYTR 16 0 1 Unmodified _YGPIVDVYVPLDFYTR_ 0 0 0 Q5JRI1;Q53GD7;A0A0S2Z504;O75494;Q6IQ42 Q5JRI1 Q5JRI1 SRSF10;FUSIP1 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 958.995 2 958.993277 1915.972 62579.38 0.79574 0.00076311 0.64645 0.00061994 1.4422 0.001383 959.494833802207 964.499873771559 131.32 0.77388 131.32 130.99 131.77 0 295 43 10 0 0 0 2.87E-07 1 85527 99.215 93.068 1 1.1761 1.2632 0 46901000 21459000 25442000 40162 574 15141 15548 63011 63011 YGPIVDVYVPLDFYTR 16 0 1 Unmodified _YGPIVDVYVPLDFYTR_ 0 0 0 Q5JRI1;Q53GD7;A0A0S2Z504;O75494;Q6IQ42 Q5JRI1 Q5JRI1 SRSF10;FUSIP1 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 959.496 2 958.993277 1915.972 61489.12 0.69897 0.00067031 0.71224 0.00068304 1.4112 0.0013533 959.495098227961 963.99803480824 130.87 0.71745 130.87 130.52 131.23 0 376 50 11 0 0 0 1.4862E-06 1 87364 95.401 95.401 1 1.1644 1.3412 0 73533000 35111000 38422000 40163 574 15141 15548 63012 63012 YGPLSGVNVVYDQR 14 0 1 Unmodified _YGPLSGVNVVYDQR_ 0 0 0 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.904 2 783.89918 1565.78381 68621.39 0.47401 0.00037158 -0.33201 -0.00026026 0.14201 0.00011132 783.899077609138 788.903509948722 89.057 0.8926 89.057 88.68 89.573 0 347 71 6 0 0 0 0.00016863 2 53614 89.189 89.189 1 1.1486 1.2693 0 57126000 22549000 34577000 40164 1716 15142 15549 63013;63014 63014 YGPLSGVNVVYDQR 14 0 1 Unmodified _YGPLSGVNVVYDQR_ 0 0 0 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.9035 2 783.89918 1565.78381 69859.95 0.64923 0.00050893 -0.18679 -0.00014643 0.46244 0.00036251 783.898983260925 788.903370558256 88.246 0.4962 88.246 87.963 88.46 0 249 45 7 0 0 0 0.00012677 2 54294 97.911 97.911 1 1.2023 1.3788 0 81745000 36071000 45674000 40165 1716 15142 15549 63015;63016 63015 YGPLSGVNVVYDQR 14 0 1 Unmodified _YGPLSGVNVVYDQR_ 0 0 0 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.4008 2 783.89918 1565.78381 67712.85 0.5261 0.00041241 -0.68742 -0.00053887 -0.16132 -0.00012646 783.89875526461 788.903644697705 101.86 0.6871 101.86 101.48 102.17 0 251 46 8 0 0 0 0.00024508 4 57685 62.924 62.924 1 0.90619 0.74274 0 12692000 6243300 6448900 40166 1716 15142 15549 63017;63018;63019;63020 63017 YGPLSGVNVVYDQR 14 0 1 Unmodified _YGPLSGVNVVYDQR_ 0 0 0 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.4013 2 783.89918 1565.78381 67715.02 0.51445 0.00040328 -0.81026 -0.00063516 -0.29581 -0.00023189 783.898806618585 788.90340503059 101.73 0.65047 101.73 101.44 102.09 0 257 48 7 0 0 0 0.0020752 3 56891 49.448 49.448 1 0.93718 0.756 0 10987000 5767800 5219300 40167 1716 15142 15549 63021;63022;63023 63023 YGQFSGLNPGGR 12 0 1 Unmodified _YGQFSGLNPGGR_ 0 0 0 P62136;A0A140VJS9;C0STL0 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8073 2 626.807094 1251.59963 NaN NaN NaN 0.084429 5.2921E-05 NaN NaN NaN NaN 56.354 0.56205 56.354 56.184 56.746 0 0 0 0 0.0006958 1 31705 86.18 76.786 1 NaN NaN 0 14268000 14268000 0 40168 1632 15143 15550 63024 63024 YGQFSGLNPGGR 12 0 1 Unmodified _YGQFSGLNPGGR_ 0 0 0 P62136;A0A140VJS9;C0STL0 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.8115 2 626.807094 1251.59963 76539.02 0.48207 0.00030217 0.55952 0.00035071 1.0416 0.00065288 626.807335860447 631.811507449097 55.462 0.7065 55.462 55.193 55.9 0 189 51 7 0 0 0 3.0623E-05 2 31743 99.855 95.072 1 0.85139 0.90887 0 24708000 12001000 12707000 40169 1632 15143 15550 63025;63026 63026 YGQFSGLNPGGRPITPPR 18 0 2 Unmodified _YGQFSGLNPGGRPITPPR_ 0 0 1 P62136;A0A140VJS9;C0STL0 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 639.005 3 638.67087 1912.99078 77823.7 0.54343 0.00034708 0.5168 0.00033006 1.0602 0.00067714 639.00556353683 645.677546617802 72.726 0.77383 72.726 72.269 73.043 0 263 57 8 0 0 0 1.9891E-05 2 42558 59.502 59.502 1 0.7661 0.83203 0 33125000 19147000 13978000 40170 1632 15144 15551 63027;63028 63028 YGQFSGLNPGGRPITPPR 18 0 2 Unmodified _YGQFSGLNPGGRPITPPR_ 0 0 1 P62136;A0A140VJS9;C0STL0 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 645.6771 3 638.67087 1912.99078 74783.23 0.38063 0.0002431 1.0071 0.00064319 1.3877 0.00088629 639.005811494684 645.344768682139 71.259 0.85952 71.259 70.664 71.524 0 284 65 8 0 0 0 1.1547E-06 1 42602 85.636 85.636 1 0.86975 0.99743 0 51560000 27154000 24406000 40171 1632 15144 15551 63029 63029 YGQFSGLNPGGRPITPPR 18 0 2 Unmodified _YGQFSGLNPGGRPITPPR_ 0 0 1 P62136;A0A140VJS9;C0STL0 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.6776 3 638.67087 1912.99078 75555.58 0.49542 0.00031641 0.31448 0.00020085 0.8099 0.00051726 638.671134618201 645.343221657727 83.176 0.55872 83.176 82.916 83.475 7.6294E-06 200 30 9 0 0 0 0.041168 1 45199 18.784 18.784 1 1.3297 1.1131 0 14076000 5517500 8558600 40172 1632 15144 15551 63030 63030 YGQFSGLNPGGRPITPPR 18 0 2 Unmodified _YGQFSGLNPGGRPITPPR_ 0 0 1 P62136;A0A140VJS9;C0STL0 P62136 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 645.6776 3 638.67087 1912.99078 75947.79 0.63883 0.00040801 -0.038711 -2.4724E-05 0.60012 0.00038328 639.005083039417 645.677386367471 83.246 0.59024 83.246 82.913 83.503 0 212 33 9 0 0 0 5.2116E-06 2 44497 79.013 79.013 1 1.369 1.2562 0 11836000 4439700 7396600 40173 1632 15144 15551 63031;63032 63032 YGQLIEINSHSLFSK 15 1 0 Unmodified _YGQLIEINSHSLFSK_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 581.977 3 579.305305 1734.89408 80624.44 0.85455 0.00049504 0.11584 6.7104E-05 0.97038 0.00056215 579.305148262725 581.976798722282 94.375 0.71993 94.375 94.038 94.758 7.6294E-06 240 59 6 0 0 0 6.9455E-05 1 58600 72.523 72.523 1 1.6304 1.7966 0 43335000 15410000 27925000 40174 1763 15145 15552 63033 63033 YGQLIEINSHSLFSK 15 1 0 Unmodified _YGQLIEINSHSLFSK_ 0 0 0 Q15645;H0YAL2 Q15645 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 581.9774 3 579.305305 1734.89408 78783.06 0.4837 0.00028021 0.14193 8.222E-05 0.62563 0.00036243 579.63960253507 581.976816893045 108.07 0.46165 108.07 107.85 108.31 0 102 22 7 0 0 0 0.011374 1 61122 24.706 24.706 1 1.2039 0.98226 0 6377900 3078000 3299900 40175 1763 15145 15552 63034 63034 YGSDIVPFSK 10 1 0 Unmodified _YGSDIVPFSK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 556.7856 2 556.784764 1111.55498 82423.04 0.67944 0.0003783 -0.20277 -0.0001129 0.47668 0.00026541 556.78464662166 560.791151002957 76.466 1.1272 76.466 75.83 76.957 0 425 94 7 0 0 0 5.549E-06 1 44990 108.57 92.367 1 0.32609 0.36848 0 82922000 60947000 21975000 40176 1476 15146 15553 63035 63035 YGSDIVPFSK 10 1 0 Unmodified _YGSDIVPFSK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 556.7845 2 556.784764 1111.55498 81908.71 0.47343 0.0002636 -0.16308 -9.0802E-05 0.31034 0.00017279 556.784692003721 560.791172813248 75.405 1.2032 75.405 74.721 75.924 0 534 107 7 0 0 0 0.00041361 2 45248 87.258 71.377 1 0.37725 0.42174 0 87121000 62606000 24514000 40177 1476 15146 15553 63036;63037 63037 YGSDIVPFSK 10 1 0 Unmodified _YGSDIVPFSK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 556.785 2 556.784764 1111.55498 NaN NaN NaN 0.31514 0.00017547 NaN NaN NaN NaN 86.579 1.2137 86.579 86.26 87.473 0 0 0 0 0.015272 1 47408 57.888 46.525 1 NaN NaN 0 16776000 16776000 0 40178 1476 15146 15553 63038 63038 YGSDIVPFSK 10 1 0 Unmodified _YGSDIVPFSK_ 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 556.7851 2 556.784764 1111.55498 82219.6 0.57265 0.00031884 0.078985 4.3977E-05 0.65164 0.00036282 556.784756026388 560.791458899165 86.686 1.3797 86.686 86.251 87.631 0 377 84 7 0 0 0 0.0027024 1 46704 67.881 54.503 1 0.32922 0.26441 0 15103000 10750000 4353500 40179 1476 15146 15553 63039 63039 YGVFPLR 7 0 1 Unmodified _YGVFPLR_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 426.2422 2 426.242338 850.470124 91870.52 0.034649 1.4769E-05 -0.087456 -3.7277E-05 -0.052807 -2.2508E-05 426.242291942556 431.246339454555 80.989 1.6157 80.989 80.467 82.083 0 655 139 9 0 0 0 0.0125 3 48548 105.42 75.22 1 0.72046 0.85569 0 918560000 515760000 402800000 40180 1471;1679 15147 15554 63040;63041;63042 63042 YGVFPLR 7 0 1 Unmodified _YGVFPLR_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 426.2422 2 426.242338 850.470124 92214.1 0.14886 6.3451E-05 -0.20075 -8.5567E-05 -0.051885 -2.2116E-05 426.242264724382 431.246267636032 79.726 1.4 79.726 79.254 80.654 0 646 113 9 0 0 0 0.015978 3 48816 98.513 69.647 1 0.74196 0.87251 0 962800000 550710000 412090000 40181 1471;1679 15147 15554 63043;63044;63045 63045 YGVFPLR 7 0 1 Unmodified _YGVFPLR_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 426.2423 2 426.242338 850.470124 91734.11 -0.15616 -6.6564E-05 0.15156 6.4601E-05 -0.0046049 -1.9628E-06 426.242461540717 431.246407750733 91.899 1.7682 91.899 91.47 93.238 0 582 108 9 0 0 0 0.033233 2 51422 64.276 49.256 1 1.3069 1.1315 0 139130000 63335000 75795000 40182 1471;1679 15147 15554 63046;63047 63047 YGVFPLR 7 0 1 Unmodified _YGVFPLR_ 0 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 426.2415 2 426.242338 850.470124 92046.33 -0.43134 -0.00018386 0.39846 0.00016984 -0.032882 -1.4016E-05 426.242590706376 431.246495455574 91.658 1.88 91.658 91.229 93.109 0 624 114 9 0 0 0 0.016461 4 50450 98.03 70.714 1 1.3589 1.1865 0 122540000 52410000 70132000 40183 1471;1679 15147 15554 63048;63049;63050;63051 63050 YGVIILDEAHER 12 0 1 Unmodified _YGVIILDEAHER_ 0 0 0 O43143;B4E0S6 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 475.585 3 472.249019 1413.72523 87204.63 0.19228 9.0802E-05 0.48707 0.00023002 0.67935 0.00032082 472.584067300422 475.584979428917 72.974 0.71632 72.974 72.512 73.228 0 169 56 5 0 0 0 0.0016135 1 42799 48.568 44.938 1 0.63277 0.66986 0 41196000 23749000 17447000 40184 1379 15148 15555 63052 63052 YGVIIVGNPK 10 1 0 Unmodified _YGVIIVGNPK_ 0 0 0 A0A024R7L5;A0A024R7L8;Q92900;B3KY55 A0A024R7L5 A0A024R7L5 UPF1 Regulator of nonsense transcripts 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.3143 2 530.313492 1058.61243 84643.93 0.54022 0.00028649 -0.072182 -3.8279E-05 0.46804 0.00024821 530.814751178251 534.320619883423 81.253 0.37089 81.253 81.081 81.452 0 74 21 5 0 0 0 0.045848 1 43124 36.76 27.546 1 1.3394 1.1109 0 1788300 827820 960490 40185 231 15149 15556 63053 63053 YGVNPGPIVGTTR 13 0 1 Unmodified _YGVNPGPIVGTTR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 670.864 2 665.859326 1329.7041 74543.84 0.54 0.00035957 0.27855 0.00018547 0.81855 0.00054504 665.859477707787 670.863679349189 67.354 0.8372 67.354 67.009 67.846 0 362 68 9 0 0 0 0.00023308 2 38803 68.893 55.54 1 1.0717 1.2202 0 115590000 54793000 60795000 40186 334;1562 15150 15557 63054;63055 63055 YGVNPGPIVGTTR 13 0 1 Unmodified _YGVNPGPIVGTTR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 670.8637 2 665.859326 1329.7041 74794.08 0.42493 0.00028294 0.069057 4.5982E-05 0.49399 0.00032893 665.859311068774 670.863447580001 66.133 0.57149 66.133 65.881 66.453 0 278 47 8 0 0 0 0.0045885 1 38936 48.284 37.064 1 1.088 1.24 0 136080000 68002000 68079000 40187 334;1562 15150 15557 63056 63056 YGVNPGPIVGTTR 13 0 1 Unmodified _YGVNPGPIVGTTR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 671.3667 2 665.859326 1329.7041 74627.99 0.43036 0.00028656 0.17704 0.00011789 0.6074 0.00040444 665.859303431157 670.863582076698 76.981 0.71143 76.981 76.71 77.421 0 245 46 7 0 0 0 0.011281 2 40995 40.727 37.609 1 1.1347 0.95393 0 26926000 12957000 13969000 40188 334;1562 15150 15557 63057;63058 63057 YGVNPGPIVGTTR 13 0 1 Unmodified _YGVNPGPIVGTTR_ 0 0 0 A0A024RBE7;P42167;G5E972;A0A024RBH7;Q59G12;H0YJH7;P42166 A0A024RBE7;P42166 P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.8637 2 665.859326 1329.7041 75369.24 0.53503 0.00035626 0.075097 5.0004E-05 0.61013 0.00040626 665.85924918906 670.863473355739 77.302 0.91125 77.302 76.994 77.905 0 297 58 8 0 0 0 0.00057256 2 40408 61.353 57.59 1 1.1676 1.0002 0 20871000 9149400 11722000 40189 334;1562 15150 15557 63059;63060 63059 YGYILPDITK 10 1 0 Unmodified _YGYILPDITK_ 0 0 0 E5RIZ4;B2R739;Q9P015 E5RIZ4 E5RIZ4 MRPL15 39S ribosomal protein L15, mitochondrial MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 595.8182 2 591.823889 1181.63323 81096.62 0.58202 0.00034445 0.47653 0.00028202 1.0585 0.00062647 591.824138188705 595.831356541227 97.878 0.55936 97.878 97.6 98.16 0 150 45 5 0 0 0 0.047781 1 61164 63.816 55.284 1 1.3425 1.4053 0 10516000 4233900 6281700 40190 847 15151 15558 63061 63061 YGYTHLSAGELLR 13 0 1 Unmodified _YGYTHLSAGELLR_ 0 0 0 Q5T0D2;B4DDL4;B2R6S5;P30085 Q5T0D2 Q5T0D2 CMPK1;CMPK UMP-CMP kinase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 497.2608 3 493.924536 1478.75178 NaN NaN NaN 0.24276 0.0001199 NaN NaN NaN NaN 75.706 0.71539 75.706 75.392 76.107 0 0 0 0 0.0084378 1 45508 43.761 36.88 1 NaN NaN 0 11611000 0 11611000 40191 844 15152 15559 63062 63062 YGYTHLSAGELLR 13 0 1 Unmodified _YGYTHLSAGELLR_ 0 0 0 Q5T0D2;B4DDL4;B2R6S5;P30085 Q5T0D2 Q5T0D2 CMPK1;CMPK UMP-CMP kinase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 497.261 3 493.924536 1478.75178 89025.28 0.30669 0.00015148 0.24899 0.00012298 0.55568 0.00027446 493.924418770406 497.260761923503 88.024 0.39748 88.024 87.852 88.25 0 90 24 6 0 0 0 0.04964 1 48499 18.789 18.789 1 1.7606 1.5274 0 2121000 808120 1312900 40192 844 15152 15559 63063 63063 YHAASAEEQATIER 14 0 1 Unmodified _YHAASAEEQATIER_ 0 0 0 A0A024R8L0;J3QLS3;Q9Y2R9;J3KSI8;J3QQS1;J3QKW2 A0A024R8L0 A0A024R8L0 MRPS7 28S ribosomal protein S7, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 793.3778 2 788.373526 1574.7325 69621.37 0.61457 0.00048451 0.47826 0.00037704 1.0928 0.00086155 788.875170892387 793.377865606318 25.393 0.17936 25.393 25.274 25.453 0 25 8 5 0 0 0 9.607E-05 2 10996 108.35 100.78 1 1.3974 1.4218 0 7205500 3030000 4175500 40193 250 15153 15560 63064;63065 63065 YHAASAEEQATIER 14 0 1 Unmodified _YHAASAEEQATIER_ 0 0 0 A0A024R8L0;J3QLS3;Q9Y2R9;J3KSI8;J3QQS1;J3QKW2 A0A024R8L0 A0A024R8L0 MRPS7 28S ribosomal protein S7, mitochondrial MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 526.2808 3 525.918109 1574.7325 85241.57 0.36516 0.00019204 0.26992 0.00014195 0.63507 0.000334 525.918222211285 529.254411784177 25.391 0.3727 25.391 25.14 25.513 0 56 18 6 0 0 0 0.031528 1 10975 34.432 30.591 1 1.2419 1.3015 0 10950000 5046300 5903900 40194 250 15153 15560 63066 63066 YHAASAEEQATIER 14 0 1 Unmodified _YHAASAEEQATIER_ 0 0 0 A0A024R8L0;J3QLS3;Q9Y2R9;J3KSI8;J3QQS1;J3QKW2 A0A024R8L0 A0A024R8L0 MRPS7 28S ribosomal protein S7, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 529.2554 3 525.918109 1574.7325 85299.3 0.18967 9.9752E-05 0.38638 0.00020321 0.57605 0.00030296 525.918801510021 529.254441657175 24.93 0.28181 24.93 24.756 25.038 1.9073E-06 45 11 8 0 0 0 0.00017947 1 10558 59.796 52.757 1 1.2371 1.2301 0 16274000 7039700 9233800 40195 250 15153 15560 63067 63067 YHDEADQSALQR 12 0 1 Unmodified _YHDEADQSALQR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BRD0 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.8303 2 716.826212 1431.63787 73919.41 0.50657 0.00036313 -0.56604 -0.00040575 -0.059468 -4.2628E-05 716.826301635075 721.830441491718 20.607 0.27008 20.607 20.493 20.763 0 46 11 7 0 0 0 1.0535E-12 2 7034 130.98 113.51 1 0.79703 0.82968 0 10484000 6661100 3822500 40196 1699 15154 15561 63068;63069 63069 YHDEADQSALQR 12 0 1 Unmodified _YHDEADQSALQR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4;H3BRD0 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.8295 2 716.826212 1431.63787 72901.73 0.69076 0.00049516 -0.60076 -0.00043064 0.090009 6.4521E-05 716.826289272452 721.829830455829 20.395 0.20456 20.395 20.28 20.485 0 26 6 7 0 0 0 1.1615E-17 3 6703 138.22 126.17 1 0.77367 0.7599 0 14171000 7412100 6759300 40197 1699 15154 15561 63070;63071;63072 63071 YHDIEPGAVVK 11 1 0 Unmodified _YHDIEPGAVVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.3292 2 614.322045 1226.62954 78866.66 0.54045 0.00033201 -0.004879 -2.9973E-06 0.53557 0.00032901 614.32201684559 618.329085117805 40.74 0.81182 40.74 40.428 41.24 -3.8147E-06 297 69 6 0 0 0 1.4137E-05 2 21281 107.21 88.533 1 1.0839 1.2092 0 62229000 30277000 31952000 40198 1741 15155 15562 63073;63074 63074 YHDIEPGAVVK 11 1 0 Unmodified _YHDIEPGAVVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.3291 2 614.322045 1226.62954 78424.53 0.41959 0.00025777 -0.026486 -1.6271E-05 0.39311 0.00024149 614.321901181097 618.329139047344 39.325 0.8027 39.325 38.958 39.761 3.8147E-06 313 67 7 0 0 0 7.3902E-08 3 20663 113.62 96.391 1 1.084 1.2111 0 90842000 46693000 44149000 40199 1741 15155 15562 63075;63076;63077 63076 YHDIEPGAVVK 11 1 0 Unmodified _YHDIEPGAVVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.3291 2 614.322045 1226.62954 78577.72 0.20582 0.00012644 -0.13322 -8.1843E-05 0.072597 4.4598E-05 614.321974884935 618.329015437037 46.7 1.1973 46.7 46.322 47.52 0 359 85 8 0 0 0 0.00026127 2 22418 90.15 90.15 1 1.3494 1.0674 0 10520000 4413000 6107000 40200 1741 15155 15562 63078;63079 63078 YHDIEPGAVVK 11 1 0 Unmodified _YHDIEPGAVVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 618.3292 2 614.322045 1226.62954 78179.38 0.12493 7.6746E-05 -0.056821 -3.4906E-05 0.068106 4.1839E-05 614.321943717122 618.32906151987 46.649 0.88221 46.649 46.291 47.173 0 319 56 8 0 0 0 8.0786E-05 2 21909 97.965 81.128 1 1.3432 1.1037 0 9655300 3926400 5728900 40201 1741 15155 15562 63080;63081 63080 YHDMPDVIDFLVLR 14 0 1 Oxidation (M) _YHDM(ox)PDVIDFLVLR_ YHDM(1)PDVIDFLVLR YHDM(41.62)PDVIDFLVLR 0 1 0 Q9NSI6;H7BZR9;Q5R2U7;H7C409;Q8WWQ0 Q9NSI6;Q8WWQ0 Q8WWQ0 BRWD1;WDR9;PHIP Bromodomain and WD repeat-containing protein 1;PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 583.9622 3 583.62739 1747.86034 78917.3 0.79466 0.00046379 0.063554 3.7092E-05 0.85822 0.00050088 583.627340043952 586.963811769073 120.72 0.95918 120.72 120.28 121.24 7.6294E-06 403 67 8 0 0 0 0.0016996 1 77609 41.621 37.653 1 0.97766 1.0093 0 23969000 13126000 10843000 40202 1942;2068 15156 15563 63082 63082 1785 YHDMPDVIDFLVLR 14 0 1 Oxidation (M) _YHDM(ox)PDVIDFLVLR_ YHDM(1)PDVIDFLVLR YHDM(50.9)PDVIDFLVLR 0 1 0 Q9NSI6;H7BZR9;Q5R2U7;H7C409;Q8WWQ0 Q9NSI6;Q8WWQ0 Q8WWQ0 BRWD1;WDR9;PHIP Bromodomain and WD repeat-containing protein 1;PH-interacting protein MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.9644 3 583.62739 1747.86034 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.3 1 120.3 119.8 120.8 7.6294E-06 0 0 0 0.0020737 1 77535 50.897 41.861 1 40203 1942;2068 15156 15563 63083 63083 1785 YHDMPDVIDFLVLR 14 0 1 Oxidation (M) _YHDM(ox)PDVIDFLVLR_ YHDM(1)PDVIDFLVLR YHDM(49.3)PDVIDFLVLR 0 1 0 Q9NSI6;H7BZR9;Q5R2U7;H7C409;Q8WWQ0 Q9NSI6;Q8WWQ0 Q8WWQ0 BRWD1;WDR9;PHIP Bromodomain and WD repeat-containing protein 1;PH-interacting protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 583.6276 3 583.62739 1747.86034 78602.34 0.86464 0.00050463 0.10083 5.8847E-05 0.96547 0.00056347 583.627226484396 586.963902259427 119.7 1.0707 119.7 119.19 120.26 -7.6294E-06 433 78 8 0 0 0 0.00054821 2 78677 49.298 46.986 1 0.95536 1.0439 0 30268000 14843000 15425000 40204 1942;2068 15156 15563 63084;63085 63084 1785 YHFLILLFSK 10 1 0 Unmodified _YHFLILLFSK_ 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 640.8737 2 640.873717 1279.73288 77061 0.65921 0.00042247 0.76809 0.00049225 1.4273 0.00091472 640.874082979756 644.880930813324 130.41 0.78125 130.41 130.2 130.98 0 141 36 6 0 0 0 1.1374E-05 1 79027 104.2 104.2 1 1.0284 0.81178 0 5345000 2841700 2503300 40205 167 15157 15564 63086 63086 YHIEVNR 7 0 1 Unmodified _YHIEVNR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.7433 2 465.743234 929.471915 89726.33 0.10101 4.7045E-05 -0.15135 -7.049E-05 -0.05034 -2.3445E-05 465.743186704223 470.747153884504 25.771 0.58517 25.771 25.56 26.145 -1.9073E-06 119 30 7 0 0 0 0.02673 1 11308 77.374 11.702 1 0.8164 0.8743 0 45683000 26502000 19181000 40206 794 15158 15565 63087 63087 YHIEVNR 7 0 1 Unmodified _YHIEVNR_ 0 0 0 B4DZB1;B3KX19;Q6IBM8;A8KAP3;Q15029;Q8IXJ3;B3KWY2 B4DZB1 B4DZB1 U5-116KD;EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 465.7435 2 465.743234 929.471915 88701.77 0.47647 0.00022191 -0.29289 -0.00013641 0.18358 8.55E-05 465.743044484864 470.747248575479 25.166 0.38927 25.166 24.963 25.353 0 56 14 8 0 0 0 0.01383 2 10812 101.72 12.049 1 0.94299 1.0825 0 79600000 40987000 38614000 40207 794 15158 15565 63088;63089 63088 YHIGDEVK 8 1 0 Unmodified _YHIGDEVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 484.7501 2 480.742899 959.471246 88239.3 0.3314 0.00015932 0.65059 0.00031277 0.98199 0.00047209 480.743071602726 484.750281545801 26.033 0.48518 26.033 25.84 26.325 -1.9073E-06 106 27 6 0 0 0 0.0027401 2 11496 98.997 60.034 1 0.98103 1.1 0 65588000 34023000 31565000 40208 1741 15159 15566 63090;63091 63090 YHIGDEVK 8 1 0 Unmodified _YHIGDEVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 480.7427 2 480.742899 959.471246 86839.09 0.36742 0.00017663 0.04964 2.3864E-05 0.41706 0.0002005 480.742756432965 484.75009790097 25.398 0.63824 25.398 25.038 25.676 1.9073E-06 87 26 7 0 0 0 0.0029104 2 11055 98.458 55.589 1 0.96244 1.0793 0 78573000 38880000 39693000 40209 1741 15159 15566 63092;63093 63093 YHIGDEVK 8 1 0 Unmodified _YHIGDEVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 484.75 2 480.742899 959.471246 90151.23 0.05057 2.4311E-05 0.1252 6.0189E-05 0.17577 8.45E-05 480.742876580075 484.749986477435 29.085 0.50758 29.085 28.809 29.316 1.9073E-06 184 41 6 0 0 0 0.017218 1 11796 60.59 41.611 1 1.2485 0.98978 0 6388000 2674800 3713200 40210 1741 15159 15566 63094 63094 YHIGDEVK 8 1 0 Unmodified _YHIGDEVK_ 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 480.7432 2 480.742899 959.471246 89816.16 -0.05034 -2.4201E-05 0.26032 0.00012515 0.20998 0.00010095 480.742970244697 484.750097403179 29.07 0.65681 29.07 28.845 29.501 0 164 38 6 0 0 0 0.0092533 2 11219 75.109 45.444 1 1.2696 1.0418 0 5162900 1897700 3265200 40211 1741 15159 15566 63095;63096 63096 YHPGYFGK 8 1 0 Unmodified _YHPGYFGK_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 488.7415 2 484.734877 967.455202 86944.7 -0.067146 -3.2548E-05 -0.12548 -6.0825E-05 -0.19263 -9.3374E-05 484.734709555304 488.741822133111 27.025 0.72001 27.025 26.818 27.538 1.9073E-06 216 39 10 0 0 0 0.021464 2 12229 60.39 49.482 1 0.81219 0.94746 0 269960000 153340000 116620000 40212 1247 15160 15567 63097;63098 63097 YHPGYFGK 8 1 0 Unmodified _YHPGYFGK_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.7382 2 484.734877 967.455202 86393.58 0.34354 0.00016653 -0.23471 -0.00011377 0.10883 5.2755E-05 484.734947103893 488.741389914613 26.184 0.68689 26.184 25.987 26.674 0 172 36 9 0 0 0 0.0082471 1 11604 92.319 54.711 1 0.59222 0.69051 0 258050000 158800000 99253000 40213 1247 15160 15567 63099 63099 YHPGYFGK 8 1 0 Unmodified _YHPGYFGK_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 488.7419 2 484.734877 967.455202 85130.74 0.050503 2.448E-05 -0.0080198 -3.8875E-06 0.042483 2.0593E-05 484.734889316722 488.741832429323 30.213 1.4273 30.213 29.893 31.321 0 465 92 9 0 0 0 0.040892 1 12349 47.067 42.472 1 0.84918 0.72876 0 81038000 44339000 36699000 40214 1247 15160 15567 63100 63100 YHPGYFGK 8 1 0 Unmodified _YHPGYFGK_ 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 484.7349 2 484.734877 967.455202 NaN NaN NaN 0.17584 8.5234E-05 NaN NaN NaN NaN 30.029 1.7922 30.029 29.792 31.584 -1.9073E-06 0 0 0 0.052247 1 11791 49.058 36.505 1 NaN NaN 0 49082000 49082000 0 40215 1247 15160 15567 63101 63101 YHSDDYIK 8 1 0 Unmodified _YHSDDYIK_ 0 0 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;B7Z3S4 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.2621 2 520.737814 1039.46108 84313.87 -0.14165 -7.3763E-05 0.74734 0.00038917 0.60569 0.00031541 520.738113073353 524.744845240437 21.945 0.47074 21.945 21.762 22.233 0 110 26 7 0 0 0 0.00044992 1 8139 130.77 103.8 1 0.73763 0.7279 0 25061000 14787000 10273000 40216 1715 15161 15568 63102 63102 YHSDDYIK 8 1 0 Unmodified _YHSDDYIK_ 0 0 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;B7Z3S4 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.7379 2 520.737814 1039.46108 84454.74 0.20416 0.00010631 0.14446 7.5225E-05 0.34862 0.00018154 520.737733992643 524.744901144058 21.366 0.29844 21.366 21.243 21.541 0 58 12 6 0 0 0 1.5387E-05 2 7515 143.85 121.35 1 0.8438 0.89361 0 23527000 11131000 12396000 40217 1715 15161 15568 63103;63104 63104 YHSDDYIK 8 1 0 Unmodified _YHSDDYIK_ 0 0 0 Q6IT96;Q13547;B5BU61;Q5TEE2;B4DSK9;B7Z3S4 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.7377 2 520.737814 1039.46108 83690.84 0.16865 8.7824E-05 0.22705 0.00011823 0.3957 0.00020606 520.737744661334 524.744893858738 23.691 0.39384 23.691 23.541 23.935 0 82 20 6 0 0 0 0.038748 1 8127 47.849 47.849 1 1.7605 1.3955 0 4728200 1669400 3058800 40218 1715 15161 15568 63105 63105 YHSDEYIK 8 1 0 Unmodified _YHSDEYIK_ 0 0 0 Q92769;B3KUJ5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 527.7462 2 527.745639 1053.47673 83518.95 0.4997 0.00026371 0.045596 2.4063E-05 0.5453 0.00028778 527.745595835763 531.752726459287 21.571 0.61097 21.571 21.282 21.893 0 159 34 7 0 0 0 0.0051057 2 7704 91.516 69.385 1 0.83919 0.9185 0 51933000 27880000 24053000 40219 1952 15162 15569 63106;63107 63106 YHSDEYIK 8 1 0 Unmodified _YHSDEYIK_ 0 0 0 Q92769;B3KUJ5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 527.7469 2 527.745639 1053.47673 83413.78 0.16311 8.6079E-05 0.55272 0.0002917 0.71583 0.00037778 527.745822829999 531.752965163051 21.005 0.78321 21.005 20.599 21.382 0 120 33 8 0 0 0 2.5665E-14 2 7157 172.15 135.96 1 0.85708 0.96279 0 74483000 43383000 31100000 40220 1952 15162 15569 63108;63109 63109 YHSDEYIK 8 1 0 Unmodified _YHSDEYIK_ 0 0 0 Q92769;B3KUJ5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 527.7457 2 527.745639 1053.47673 84049.82 0.17441 9.2046E-05 0.18422 9.7219E-05 0.35863 0.00018926 527.745817796467 531.752706440379 23.12 0.46379 23.12 22.921 23.385 0 99 20 8 0 0 0 0.0022675 2 7710 101.33 85.183 1 1.6826 1.3156 0 11826000 4455300 7370800 40221 1952 15162 15569 63110;63111 63111 YHSDEYIK 8 1 0 Unmodified _YHSDEYIK_ 0 0 0 Q92769;B3KUJ5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 Q92769 Q92769 HDAC2 Histone deacetylase 2;Histone deacetylase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 527.746 2 527.745639 1053.47673 83488.34 0.165 8.708E-05 0.25312 0.00013358 0.41812 0.00022066 527.745697434198 531.752796480225 22.947 0.4426 22.947 22.737 23.179 1.9073E-06 103 18 8 0 0 0 0.0064394 2 7086 87.251 77.593 1 1.7181 1.4073 0 8626300 3309800 5316500 40222 1952 15162 15569 63112;63113 63113 YHTINGHNAEVR 12 0 1 Unmodified _YHTINGHNAEVR_ 0 0 0 P22626;A0A087WUI2;I6L957;A0A024RA28 P22626 P22626 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 474.2365 3 470.900613 1409.68001 86013 -0.26516 -0.00012486 -1.9207 -0.00090445 -2.1858 -0.0010293 471.232367688745 474.236699770444 17.512 0.46429 17.512 17.32 17.785 0 70 17 8 0 0 0 1.6625E-08 1 4436 113.24 79.364 1 1.4084 1.4221 0 10174000 3120600 7053900 40223 1508 15163 15570 63114 63114 YHTMQAAVDAVAR 13 0 1 Oxidation (M) _YHTM(ox)QAAVDAVAR_ YHTM(1)QAAVDAVAR YHTM(102.52)QAAVDAVAR 0 1 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.8558 2 724.851175 1447.6878 73479.24 0.79679 0.00057756 -0.17789 -0.00012894 0.6189 0.00044861 725.352800871599 729.855216049042 28.224 0.42123 28.224 28.119 28.54 0 57 29 4 0 0 0 3.9028E-06 1 13274 102.52 92.57 1 1.2628 1.2623 0 8873200 3336200 5537000 40224 2007 15164 15571 63115 63115 1848 YHTMQAAVDAVAR 13 0 1 Oxidation (M) _YHTM(ox)QAAVDAVAR_ YHTM(1)QAAVDAVAR YHTM(122.7)QAAVDAVAR 0 1 0 Q9BVI4;F5H303 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 729.8562 2 724.851175 1447.6878 72469.52 0.39107 0.00028347 -0.20717 -0.00015016 0.1839 0.0001333 724.849989123162 729.855492785259 27.354 0.27765 27.354 27.205 27.483 0 55 14 7 0 0 0 1.239E-09 2 12646 122.7 111.21 1 1.6564 1.6605 0 18048000 7656300 10392000 40225 2007 15164 15571 63116;63117 63116 1848 YHTSQSGDEMTSLSEYVSR 19 0 1 Oxidation (M) _YHTSQSGDEM(ox)TSLSEYVSR_ YHTSQSGDEM(1)TSLSEYVSR YHTSQSGDEM(71.07)TSLSEYVSR 0 1 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 735.3224 3 731.65154 2191.93279 71022.97 0.6845 0.00050082 -0.0091318 -6.6813E-06 0.67537 0.00049414 731.651794537879 734.987564323476 53.432 1.0586 53.432 52.926 53.985 0 375 83 8 0 0 0 3.0397E-06 3 29679 71.073 71.073 1 2.365 2.6158 0 59346000 15051000 44295000 40226 379 15165 15572 63118;63119;63120 63118 278 YHTSQSGDEMTSLSEYVSR 19 0 1 Oxidation (M) _YHTSQSGDEM(ox)TSLSEYVSR_ YHTSQSGDEM(1)TSLSEYVSR YHTSQSGDEM(49.53)TSLSEYVSR 0 1 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q9H6X9;A8K3W9 B4DMA2 B4DMA2 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 735.6561 3 731.65154 2191.93279 70121.01 0.74651 0.00054619 0.075268 5.507E-05 0.82178 0.00060126 731.986639193627 734.987598113679 52.092 1.2396 52.092 51.543 52.783 0 501 97 10 0 0 0 1.0857E-05 1 29471 49.528 49.528 1 2.43 2.7793 0 87681000 24914000 62767000 40227 379 15165 15572 63121 63121 278 YHVLVNLGK 9 1 0 Unmodified _YHVLVNLGK_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 521.8068 2 521.805834 1041.59712 84383.31 0.68342 0.00035661 0.15892 8.2923E-05 0.84233 0.00043953 521.805694502917 525.812825648253 54.566 0.568 54.566 54.276 54.844 0 202 44 7 0 0 0 0.00017704 3 31107 107.32 98.554 1 0.89574 0.99224 0 46493000 26776000 19716000 40228 1411 15166 15573 63122;63123;63124 63123 YHVLVNLGK 9 1 0 Unmodified _YHVLVNLGK_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 525.8135 2 521.805834 1041.59712 85296.32 0.34434 0.00017968 -0.69753 -0.00036398 -0.35319 -0.0001843 521.805053946039 525.812997814917 65.08 0.70454 65.08 64.798 65.503 0 181 54 5 0 0 0 0.023689 1 33597 48.561 46.504 1 0.86243 0.68342 0 4829800 2516000 2313800 40229 1411 15166 15573 63125 63125 YHVLVNLGK 9 1 0 Unmodified _YHVLVNLGK_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 525.8129 2 521.805834 1041.59712 86282.92 0.10929 5.7026E-05 -0.0062287 -3.2502E-06 0.10306 5.3776E-05 521.805725218975 525.8128816522 65.104 0.76614 65.104 64.769 65.535 0 187 57 5 0 0 0 0.0068245 2 32789 63.21 60.051 1 0.92832 0.73596 0 3990700 2034300 1956300 40230 1411 15166 15573 63126;63127 63126 YHVVSGADDYTVK 13 1 0 Unmodified _YHVVSGADDYTVK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.3582 2 727.351531 1452.68851 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.465 1 40.465 39.965 40.965 0 0 0 0 0.00043353 1 21173 86.014 63.928 1 40231 1936 15167 15574 63128 63128 YHVVSGADDYTVK 13 1 0 Unmodified _YHVVSGADDYTVK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.3596 2 727.351531 1452.68851 71249.64 0.60064 0.00043688 -0.2215 -0.00016111 0.37915 0.00027577 727.35147466236 731.358721562052 39.204 0.74955 39.204 38.908 39.658 0 320 64 9 0 0 0 8.2127E-19 2 20662 143.5 132.28 1 0.86682 0.96855 0 92095000 53091000 39004000 40232 1936 15167 15574 63129;63130 63130 YHVVSGADDYTVK 13 1 0 Unmodified _YHVVSGADDYTVK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.3528 2 727.351531 1452.68851 70446.37 0.45848 0.00033348 0.38646 0.0002811 0.84495 0.00061457 727.351879053198 731.358775829698 47.055 0.96114 47.055 46.801 47.762 0 405 73 8 0 0 0 0.0059061 2 22707 46.796 46.796 1 1.3111 1.0209 0 15614000 6833400 8780800 40233 1936 15167 15574 63131;63132 63132 YHVVSGADDYTVK 13 1 0 Unmodified _YHVVSGADDYTVK_ 0 0 0 Q8TED0;H0Y8P4 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 731.3597 2 727.351531 1452.68851 70299.58 0.29 0.00021093 0.40709 0.0002961 0.69708 0.00050703 727.351902499447 731.358843699406 47.203 0.79429 47.203 46.92 47.714 0 353 60 8 0 0 0 0.00057491 2 22230 61.344 57.327 1 1.2501 1.0037 0 14559000 6604000 7954700 40234 1936 15167 15574 63133;63134 63133 YHWLVLPWTSISSLK 15 1 0 Unmodified _YHWLVLPWTSISSLK_ 0 0 0 F8W6G5;C9JZ40;F5HRF8;A0A0A0MRW7;Q7Z2E3 F8W6G5 F8W6G5 APTX Aprataxin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 611.005 3 610.669807 1828.98759 80134.8 0.71755 0.00043818 -0.39399 -0.0002406 0.32355 0.00019758 611.00376439602 613.675736781071 132.63 0.17706 132.63 132.55 132.73 0 42 10 6 0 0 0 0.00035931 2 86672 48.527 48.527 1 0.76743 0.77696 0 5739400 3177600 2561800 40235 472 15168 15575 63135;63136 63135 YHWLVLPWTSISSLK 15 1 0 Unmodified _YHWLVLPWTSISSLK_ 0 0 0 F8W6G5;C9JZ40;F5HRF8;A0A0A0MRW7;Q7Z2E3 F8W6G5 F8W6G5 APTX Aprataxin ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 610.6708 3 610.669807 1828.98759 NaN NaN NaN -0.3227 -0.00019706 NaN NaN NaN NaN 132.53 0.25471 132.53 132.38 132.64 0 0 0 0 1.7733E-05 1 88825 64.394 47.995 1 NaN NaN 0 3653000 3653000 0 40236 472 15168 15575 63137 63137 YHYELLNYIDLPVLAIHGK 19 1 0 Unmodified _YHYELLNYIDLPVLAIHGK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.5638 4 568.559761 2270.20994 78191.46 1.1698 0.00066508 -0.11866 -6.7464E-05 1.0511 0.00059762 568.810357963879 570.813907437674 134.36 0.17001 134.36 134.28 134.45 0 59 7 11 0 0 0 5.7747E-08 2 82005 92.307 92.307 1 1.4146 1.1642 0 39875000 15295000 24580000 40237 303 15169 15576 63138;63139 63138 YHYELLNYIDLPVLAIHGK 19 1 0 Unmodified _YHYELLNYIDLPVLAIHGK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 758.0793 3 757.743923 2270.20994 69162.42 1.251 0.00094793 0.13743 0.00010414 1.3884 0.0010521 758.078331236386 760.749662482611 134.36 0.30408 134.36 134.28 134.59 0 64 12 10 0 0 0 2.4347E-17 2 82012 119.23 119.23 1 1.606 1.3818 0 90552000 34642000 55910000 40238 303 15169 15576 63140;63141 63141 YHYELLNYIDLPVLAIHGK 19 1 0 Unmodified _YHYELLNYIDLPVLAIHGK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 760.7503 3 757.743923 2270.20994 69958.12 0.94415 0.00071542 -0.18539 -0.00014048 0.75876 0.00057495 758.078079797292 760.749401958853 134.31 0.25256 134.31 134.22 134.47 0 63 10 10 0 0 0 1.6254E-09 2 81067 99.021 99.021 1 1.585 1.3384 0 56507000 22384000 34122000 40239 303 15169 15576 63142;63143 63143 YHYELLNYIDLPVLAIHGK 19 1 0 Unmodified _YHYELLNYIDLPVLAIHGK_ 0 0 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.5638 4 568.559761 2270.20994 79725.71 0.83399 0.00047417 -0.3911 -0.00022237 0.44289 0.00025181 568.810295846769 570.56306707073 134.3 0.16791 134.3 134.22 134.39 0 55 7 10 0 0 0 4.907E-05 1 81048 54.292 54.292 1 1.6291 1.3159 0 23570000 8441800 15128000 40240 303 15169 15576 63144 63144 YIAPTVLTDVDPK 13 1 0 Unmodified _YIAPTVLTDVDPK_ 0 0 0 J3QRD1;Q59H65;P51648;Q68D64 J3QRD1 J3QRD1 ALDH3A2;DKFZp686E23276 Fatty aldehyde dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 720.3986 2 716.390125 1430.7657 73532.38 1.307 0.0009363 -0.33233 -0.00023808 0.97463 0.00069821 716.389188137298 720.397193592971 96.456 0.73038 96.456 95.893 96.624 0 184 64 4 0 0 0 0.00021605 2 58770 69.721 63.719 1 1.032 1.0129 0 22955000 9417100 13538000 40241 1338 15170 15577 63145;63146 63146 YIAPTVLTDVDPK 13 1 0 Unmodified _YIAPTVLTDVDPK_ 0 0 0 J3QRD1;Q59H65;P51648;Q68D64 J3QRD1 J3QRD1 ALDH3A2;DKFZp686E23276 Fatty aldehyde dehydrogenase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 720.8975 2 716.390125 1430.7657 72177.39 1.1833 0.00084771 -0.99028 -0.00070943 0.19302 0.00013828 716.389209837349 720.396619873162 95.585 0.7062 95.585 95.221 95.927 7.6294E-06 177 58 4 0 0 0 0.0014362 1 59442 57.836 57.836 1 1.1647 1.2559 0 21753000 10007000 11747000 40242 1338 15170 15577 63147 63147 YIAPTVLTDVDPK 13 1 0 Unmodified _YIAPTVLTDVDPK_ 0 0 0 J3QRD1;Q59H65;P51648;Q68D64 J3QRD1 J3QRD1 ALDH3A2;DKFZp686E23276 Fatty aldehyde dehydrogenase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 720.3972 2 716.390125 1430.7657 73787.48 0.80769 0.00057862 -0.2786 -0.00019959 0.52909 0.00037903 716.39001619745 720.396892302625 109.45 0.41621 109.45 109.25 109.66 0 70 18 6 0 0 0 0.013701 3 63026 37.995 36.684 1 1.5173 1.2453 0 2418100 995210 1422900 40243 1338 15170 15577 63148;63149;63150 63148 YIASVQGSTPSPR 13 0 1 Unmodified _YIASVQGSTPSPR_ 0 0 0 P49792;D3DX73;F8WBP7 P49792 P49792 RANBP2;hCG_1994636 E3 SUMO-protein ligase RanBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 686.8561 2 681.854241 1361.69393 75098.46 0.4857 0.00033118 -0.71815 -0.00048967 -0.23245 -0.0001585 681.854212169314 686.857338023013 41.91 0.33706 41.91 41.715 42.052 0 73 24 4 0 0 0 0.00014131 2 22144 82.261 67 1 1.3047 1.3517 0 10354000 4688000 5666400 40244 1588 15171 15578 63151;63152 63152 YIASVQGSTPSPR 13 0 1 Unmodified _YIASVQGSTPSPR_ 0 0 0 P49792;D3DX73;F8WBP7 P49792 P49792 RANBP2;hCG_1994636 E3 SUMO-protein ligase RanBP2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 686.8596 2 681.854241 1361.69393 74697.84 0.80892 0.00055157 -0.40021 -0.00027289 0.40871 0.00027868 681.853846281912 686.857995088106 41.114 0.26474 41.114 40.952 41.217 0 54 22 4 0 0 0 2.3207E-13 2 22058 128.03 116.44 1 1.3039 1.2835 0 13275000 5904900 7370600 40245 1588 15171 15578 63153;63154 63154 YICDNQDTISSK 12 1 0 Unmodified _YICDNQDTISSK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 722.3242 2 722.324656 1442.63476 NaN NaN NaN -1.3972 -0.0010092 NaN NaN NaN NaN 30.576 0.54709 30.576 30.401 30.948 0 0 0 0 0.037332 1 14929 44.863 12.449 1 NaN NaN 0 7113300 7113300 0 + 40246 1153 15172 15579 63155 63155 YIDQEELNK 9 1 0 Unmodified _YIDQEELNK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF8;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q14568 B4DMA2;Q58FF8;K9JA46 B4DMA2 HSP90AB1;HSP90AB2P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 576.2829 2 576.282586 1150.55062 76527 0.82093 0.00047309 0.043555 2.51E-05 0.86449 0.00049819 576.282726862303 580.289638940872 33.136 0.92292 33.136 32.711 33.634 0 416 91 6 0 0 0 5.5076E-06 3 16412 132.08 86.749 1 2.331 2.6298 0 132950000 39952000 92998000 40247 379;1348;1800 15173 15580 63156;63157;63158 63157 YIDQEELNK 9 1 0 Unmodified _YIDQEELNK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF8;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q14568 B4DMA2;Q58FF8;K9JA46 B4DMA2 HSP90AB1;HSP90AB2P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.2893 2 576.282586 1150.55062 75916.2 0.73977 0.00042631 0.27432 0.00015808 1.0141 0.0005844 576.283690783691 580.28966473306 32.686 1.1122 32.686 31.97 33.082 0 512 106 8 0 0 0 1.0356E-11 3 16169 155.07 97.89 1 2.3517 2.714 0 189830000 55584000 134250000 40248 379;1348;1800 15173 15580 63159;63160;63161 63159 YIDQEELNK 9 1 0 Unmodified _YIDQEELNK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF8;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q14568 B4DMA2;Q58FF8;K9JA46 B4DMA2 HSP90AB1;HSP90AB2P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 580.2894 2 576.282586 1150.55062 78412.66 0.44731 0.00025778 1.3771 0.00079359 1.8244 0.0010514 576.283768194106 580.290538914471 38.242 1.1904 38.242 37.777 38.968 0 368 94 6 0 0 0 0.0016784 1 17222 82.279 51.205 1 1.5078 1.2252 0 28448000 11490000 16958000 40249 379;1348;1800 15173 15580 63162 63162 YIDQEELNK 9 1 0 Unmodified _YIDQEELNK_ 0 0 0 B4DMA2;A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF8;K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q14568 B4DMA2;Q58FF8;K9JA46 B4DMA2 HSP90AB1;HSP90AB2P;EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 576.2822 2 576.282586 1150.55062 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.379 1 38.379 37.879 38.879 0 0 0 0 0.012045 1 16945 61.679 35.852 1 40250 379;1348;1800 15173 15580 63163 63163 YIDSADLEPITSQEEPVR 18 0 1 Unmodified _YIDSADLEPITSQEEPVR_ 0 0 0 P17812;B4E1E0;B4DMB5 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1036.5073 2 1031.50239 2060.99023 60716.12 0.80127 0.00082651 0.080689 8.3231E-05 0.88196 0.00090974 1032.00403862761 1036.50641373261 92.162 0.54494 92.162 91.893 92.438 0 248 52 7 0 0 0 1.7403E-05 1 55711 74.46 69.076 1 1.7658 1.793 0 27803000 12344000 15459000 40251 1494 15174 15581 63164 63164 YIDSADLEPITSQEEPVR 18 0 1 Unmodified _YIDSADLEPITSQEEPVR_ 0 0 0 P17812;B4E1E0;B4DMB5 P17812 P17812 CTPS1 CTP synthase 1;CTP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1032.0049 2 1031.50239 2060.99023 60225.57 0.44872 0.00046286 0.079642 8.2151E-05 0.52837 0.00054501 1032.00364660283 1037.00806738668 91.53 0.53709 91.53 91.276 91.813 -7.6294E-06 230 46 7 0 0 0 7.058E-05 2 56741 70.628 70.628 1 1.8016 1.9722 0 32907000 12678000 20229000 40252 1494 15174 15581 63165;63166 63166 YIEGLSAESNSISK 14 1 0 Unmodified _YIEGLSAESNSISK_ 0 0 0 Q86U86;Q9NVM2;Q5EBM5 Q86U86 Q86U86 PBRM1;PB1 Protein polybromo-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 753.381 2 749.375203 1496.73585 71207.56 0.34479 0.00025838 0.067388 5.0499E-05 0.41218 0.00030887 749.876416759178 753.382337959149 62.072 0.52557 62.072 61.742 62.268 0 105 42 5 0 0 0 0.00018442 3 35711 71.555 71.555 1 0.71446 0.7465 0 11885000 7585500 4299400 40253 1883 15175 15582 63167;63168;63169 63169 YIEGLSAESNSISK 14 1 0 Unmodified _YIEGLSAESNSISK_ 0 0 0 Q86U86;Q9NVM2;Q5EBM5 Q86U86 Q86U86 PBRM1;PB1 Protein polybromo-1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.8752 2 749.375203 1496.73585 NaN NaN NaN -0.90579 -0.00067878 NaN NaN NaN NaN 60.873 0.14138 60.873 60.753 60.894 0 0 0 0 0.0015088 1 35589 70.488 53.121 1 NaN NaN 0 3778100 3778100 0 40254 1883 15175 15582 63170 63170 YIESPVLFLR 10 0 1 Unmodified _YIESPVLFLR_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.8574 2 618.852981 1235.69141 NaN NaN NaN -0.15866 -9.8189E-05 NaN NaN NaN NaN 113.56 0.53265 113.56 113.3 113.83 0 0 0 0 0.005628 1 71934 67.993 42.256 1 NaN NaN 0 4210800 0 4210800 40255 161 15176 15583 63171 63171 YIESPVLFLR 10 0 1 Unmodified _YIESPVLFLR_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 623.8578 2 618.852981 1235.69141 NaN NaN NaN 0.41691 0.000258 NaN NaN NaN NaN 112.84 0.59506 112.84 112.56 113.15 0 0 0 0 0.010728 1 73013 62.582 51.774 1 NaN NaN 0 5761400 0 5761400 40256 161 15176 15583 63172 63172 YIFCVSGDFVK 11 1 0 Unmodified _YIFCVSGDFVK_ 0 0 0 A8K330;Q8IWA0;F8WE20;F8WC81 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 667.8271 2 667.826106 1333.63766 76847.13 0.72311 0.00048291 0.18124 0.00012103 0.90434 0.00060394 667.825982581796 671.833316612336 104.89 0.59296 104.89 104.62 105.22 0 153 47 5 0 0 0 0.0057959 2 64868 55.567 50.67 1 0.89311 0.90326 0 10136000 5097100 5039100 40257 716 15177 15584 63173;63174 63174 YIFCVSGDFVK 11 1 0 Unmodified _YIFCVSGDFVK_ 0 0 0 A8K330;Q8IWA0;F8WE20;F8WC81 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.8336 2 667.826106 1333.63766 76158.39 0.61683 0.00041193 0.14857 9.922E-05 0.7654 0.00051115 667.825866777959 671.833250175678 104.14 0.57948 104.14 103.82 104.39 7.6294E-06 215 48 7 0 0 0 0.002424 2 65919 61.65 57.199 1 0.85051 0.84903 0 14339000 7807300 6531400 40258 716 15177 15584 63175;63176 63176 YIFCVSGDFVK 11 1 0 Unmodified _YIFCVSGDFVK_ 0 0 0 A8K330;Q8IWA0;F8WE20;F8WC81 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 671.834 2 667.826106 1333.63766 75359.64 0.87124 0.00058183 0.091918 6.1385E-05 0.96315 0.00064322 667.826110106219 671.833114259325 116.19 0.59184 116.19 115.86 116.45 0 136 28 8 0 0 0 0.046186 1 67286 35.224 31.523 1 1.4292 1.1641 0 6762100 2691700 4070400 40259 716 15177 15584 63177 63177 YIFSVVENLQR 11 0 1 Unmodified _YIFSVVENLQR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 689.3745 2 684.369527 1366.7245 75772.76 0.63479 0.00043443 -0.094858 -6.4918E-05 0.53993 0.00036951 684.369282763167 689.3736370958 106.75 0.59332 106.75 106.48 107.07 0 148 45 5 0 0 0 0.03052 1 66209 45.997 45.997 1 0.7567 0.79419 0 11105000 4654200 6450600 40260 1699 15178 15585 63178 63178 YIFSVVENLQR 11 0 1 Unmodified _YIFSVVENLQR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.8765 2 684.369527 1366.7245 74581.75 0.74371 0.00050897 0.084634 5.7921E-05 0.82834 0.00056689 684.369646043797 689.373918056834 106.01 0.53616 106.01 105.79 106.33 7.6294E-06 186 40 6 0 0 0 0.00076568 2 67445 85.731 85.731 1 0.69618 0.69778 0 18153000 8236200 9916800 40261 1699 15178 15585 63179;63180 63180 YIFSVVENLQR 11 0 1 Unmodified _YIFSVVENLQR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 689.3746 2 684.369527 1366.7245 75950.05 0.84586 0.00057888 0.20879 0.00014289 1.0547 0.00072177 684.870896603834 689.37405509139 118.05 0.58337 118.05 117.77 118.36 0 90 21 6 0 0 0 0.014921 1 69600 54.608 54.608 1 1.4909 1.2504 0 3148100 1318000 1830100 40262 1699 15178 15585 63181 63181 YIFSVVENLQR 11 0 1 Unmodified _YIFSVVENLQR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.8764 2 684.369527 1366.7245 73887.79 0.49082 0.0003359 0.71515 0.00048943 1.206 0.00082533 684.369589246993 689.374756122614 117.86 0.5226 117.86 117.66 118.18 0 96 24 6 0 0 0 0.03834 1 68536 44.203 44.203 1 1.2219 1.0441 0 3252600 1399400 1853200 40263 1699 15178 15585 63182 63182 YIFTLGDIAQLCPAR 15 0 1 Unmodified _YIFTLGDIAQLCPAR_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.4571 2 869.453265 1736.89198 65547.18 0.63383 0.00055109 -1.4693 -0.0012775 -0.83549 -0.00072642 869.452968611775 874.45762308248 124.35 0.50163 124.35 124.09 124.59 -7.6294E-06 215 33 9 0 0 0 8.1425E-22 2 80679 140.3 140.3 1 0.99598 1.0072 0 17865000 7781900 10084000 40264 1565 15179 15586 63183;63184 63184 YIFTLGDIAQLCPAR 15 0 1 Unmodified _YIFTLGDIAQLCPAR_ 0 0 0 P42695;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.4615 2 869.453265 1736.89198 65344.14 0.77484 0.00067369 -1.376 -0.0011963 -0.60113 -0.00052265 869.453155607077 874.457692451777 123.96 0.58299 123.96 123.61 124.19 0 216 39 8 0 0 0 6.8913E-22 3 82283 141.88 141.88 1 0.93459 0.98313 0 23125000 12750000 10375000 40265 1565 15179 15586 63185;63186;63187 63186 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(64.65)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.3473 2 659.347206 1316.67986 73983.48 0.73985 0.00048782 -0.13581 -8.9548E-05 0.60403 0.00039827 659.347081991482 664.351663545353 106.33 1.2729 106.33 105.59 106.86 7.6294E-06 515 77 11 0 0 0 0.00087704 2 65924 64.654 64.654 1 1.3886 1.5661 0 99423000 40863000 58561000 40266 1471 15180 15587 63188;63189 63189 1215 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(77.68)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.3477 2 659.347206 1316.67986 73642.23 0.85477 0.00056359 -0.46691 -0.00030786 0.38785 0.00025573 659.347206630036 664.351728275706 107.29 1.4221 107.29 106.81 108.23 -7.6294E-06 651 108 12 0 0 0 0.00021725 2 66673 77.677 77.677 1 1.3444 1.5225 0 105580000 46642000 58940000 40267 1471 15180 15587 63190;63191 63191 1215 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(54.61)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.3458 2 659.347206 1316.67986 77935.72 0.94156 0.00062081 -0.67684 -0.00044627 0.26472 0.00017454 659.345904664288 664.351973232938 120.88 0.49519 120.88 120.62 121.12 0 82 35 5 0 0 0 0.0030656 1 78007 54.608 33.706 1 0.71971 0.74712 0 5617800 3400000 2217800 40268 1471 15180 15587 63192 63192 1215 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(79.99)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3522 2 659.347206 1316.67986 74117.39 0.6655 0.0004388 0.045221 2.9816E-05 0.71073 0.00046862 659.34725035186 664.35167431873 105.62 1.0803 105.62 105.12 106.2 -7.6294E-06 456 79 11 0 0 0 0.00020299 2 66945 79.986 79.986 1 1.3307 1.5153 0 108020000 47048000 60968000 40269 1471 15180 15587 63193;63194 63193 1215 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(72.64)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.3477 2 659.347206 1316.67986 71254.44 0.84741 0.00055874 -0.37441 -0.00024686 0.473 0.00031187 659.347159896707 664.351634653495 106.6 1.2412 106.6 105.98 107.22 0 529 92 9 0 0 0 0.00037153 3 67769 72.643 72.643 1 1.3541 1.5493 0 161460000 69064000 92395000 40270 1471 15180 15587 63195;63196;63197 63197 1215 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(46.16)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 659.3462 2 659.347206 1316.67986 NaN NaN NaN -0.96529 -0.00063646 NaN NaN NaN NaN 120.27 0.49062 120.27 120.04 120.53 0 0 0 0 0.013581 1 79322 46.158 13.937 1 NaN NaN 0 3765000 3765000 0 40271 1471 15180 15587 63198 63198 1215 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(52.49)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.352 2 659.347206 1316.67986 73137.15 0.89156 0.00058785 0.39763 0.00026218 1.2892 0.00085003 659.347350885598 664.352231034418 117.76 0.98495 117.76 117.35 118.34 0 215 42 9 0 0 0 0.0036344 2 69404 52.49 52.49 1 1.0049 0.84756 0 28742000 14605000 14138000 40272 1471 15180 15587 63199;63200 63200 1215 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(73.07)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.353 2 659.347206 1316.67986 73670.07 0.81505 0.0005374 0.20259 0.00013358 1.0176 0.00067098 659.347126689727 664.351786656859 118.64 1.6497 118.64 118.19 119.84 0 339 76 12 0 0 0 0.00034473 2 70022 73.067 73.067 1 0.85053 0.72714 0 39049000 21449000 17600000 40273 1471 15180 15587 63201;63202 63202 1215 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(71.45)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.3528 2 659.347206 1316.67986 75248.02 0.96777 0.0006381 0.26001 0.00017144 1.2278 0.00080953 659.347208295067 664.351782177198 133.21 1.32 133.21 132.84 134.16 0 253 54 10 0 0 0 0.00044698 2 81063 71.451 71.451 1 1.5292 1.248 0 14578000 5357500 9220500 40274 1471 15180 15587 63203;63204 63204 1215 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(52.58)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.352 2 659.347206 1316.67986 73364.91 0.55396 0.00036525 0.38765 0.00025559 0.9416 0.00062084 659.347426297384 664.35211883973 117.54 1.4525 117.54 116.7 118.16 0 248 41 10 0 0 0 0.0036105 1 68317 52.579 52.579 1 1.0147 0.88506 0 35790000 17372000 18418000 40275 1471 15180 15587 63205 63205 1215 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(76.46)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.348 2 659.347206 1316.67986 73042.38 0.76459 0.00050413 0.51847 0.00034185 1.2831 0.00084598 659.34724131342 664.352172109917 118.43 1.6321 118.43 118.07 119.7 0 340 58 12 0 0 0 0.00022473 2 68941 76.465 76.465 1 0.89211 0.77818 0 31926000 17585000 14340000 40276 1471 15180 15587 63206;63207 63206 1215 YIFTMLSSLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSSLAR_ YIFTM(1)LSSLAR YIFTM(81.34)LSSLAR 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.3517 2 659.347206 1316.67986 74703.36 1.1473 0.0007565 0.19919 0.00013134 1.3465 0.00088783 659.347207471323 664.351662428407 132.93 1.5389 132.93 132.5 134.04 0 273 66 8 0 0 0 0.00019464 1 79928 81.338 81.338 1 1.4344 1.2112 0 17896000 6533800 11363000 40277 1471 15180 15587 63208 63208 1215 YIFTMLSSLAR 11 0 1 Unmodified _YIFTMLSSLAR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3501 2 651.349748 1300.68494 74751.7 0.985 0.00064158 -0.18079 -0.00011776 0.8042 0.00052382 651.349552112694 656.35390920788 120.87 0.98048 120.87 120.57 121.55 0 300 67 8 0 0 0 9.0215E-11 2 78046 136.57 136.57 1 0.58788 0.62701 0 44052000 27335000 16717000 40278 1471 15180 15588 63209;63210 63210 YIFTMLSSLAR 11 0 1 Unmodified _YIFTMLSSLAR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 656.3544 2 651.349748 1300.68494 73844.55 1.1138 0.0007255 -0.35315 -0.00023003 0.76069 0.00049547 651.349501795245 656.353806037733 120.27 0.99766 120.27 119.97 120.97 0 334 71 8 0 0 0 5.7131E-08 2 79352 116.3 116.3 1 0.58893 0.66568 0 47435000 29011000 18424000 40279 1471 15180 15588 63211;63212 63211 YIFTMLSSLAR 11 0 1 Unmodified _YIFTMLSSLAR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.3551 2 651.349748 1300.68494 73447.23 1.0655 0.00069403 -0.14543 -9.4725E-05 0.9201 0.00059931 651.349714142279 656.353838888409 133.24 1.7438 133.24 132.96 134.7 -1.5259E-05 356 75 10 0 0 0 2.8396E-05 2 81160 101.65 101.65 1 1.4394 1.2399 0 61821000 24950000 36871000 40280 1471 15180 15588 63213;63214 63214 YIFTMLSSLAR 11 0 1 Unmodified _YIFTMLSSLAR_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.3506 2 651.349748 1300.68494 72966.5 1.1761 0.00076607 -0.09722 -6.3324E-05 1.0789 0.00070274 651.349719235136 656.353846334029 132.92 1.7982 132.92 132.48 134.28 0 384 81 10 0 0 0 4.2083E-08 2 79969 118.71 118.71 1 1.3796 1.2037 0 58680000 25421000 33259000 40281 1471 15180 15588 63215;63216 63215 YIFTMLSTLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSTLAR_ YIFTM(1)LSTLAR YIFTM(53.68)LSTLAR 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 671.3607 2 666.355031 1330.69551 NaN NaN NaN -0.34032 -0.00022677 NaN NaN NaN NaN 106.41 0.61771 106.41 106.13 106.74 0 0 0 0 0.0056549 1 66170 53.683 33.353 1 NaN NaN 0 6418900 0 6418900 40282 1679 15181 15589 63217 63217 1488 YIFTMLSTLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSTLAR_ YIFTM(1)LSTLAR YIFTM(51.27)LSTLAR 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.3601 2 666.355031 1330.69551 74935.44 0.82434 0.0005493 -0.49852 -0.00033219 0.32582 0.00021711 666.354634451358 671.358679754741 106.6 0.74124 106.6 106.22 106.97 0 185 56 5 0 0 0 0.0039627 1 67772 51.268 51.268 1 1.0492 1.0527 0 19028000 8129100 10898000 40283 1679 15181 15589 63218 63218 1488 YIFTMLSTLAR 11 0 1 Oxidation (M) _YIFTM(ox)LSTLAR_ YIFTM(1)LSTLAR YIFTM(63.22)LSTLAR 0 1 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 671.36 2 666.355031 1330.69551 NaN NaN NaN 0.8862 0.00059053 NaN NaN NaN NaN 105.69 0.54935 105.69 105.35 105.9 0 0 0 0 0.0021074 1 67144 63.216 39.788 1 NaN NaN 0 4943300 0 4943300 40284 1679 15181 15589 63219 63219 1488 YIFTMLSTLAR 11 0 1 Unmodified _YIFTMLSTLAR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 658.8605 2 658.357573 1314.70059 76145.33 0.88145 0.00058031 0.27271 0.00017954 1.1542 0.00075985 658.35728112051 663.361062628015 133.84 0.66187 133.84 133.54 134.2 0 85 27 6 0 0 0 0.017726 1 81641 45.161 28.958 1 1.2386 1.0754 0 2341100 1091000 1250100 40285 1679 15181 15590 63220 63220 YIFTMLSTLAR 11 0 1 Unmodified _YIFTMLSTLAR_ 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5;Q59H80 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 663.3624 2 658.357573 1314.70059 75440.61 1.1264 0.00074161 0.00042728 2.813E-07 1.1269 0.00074189 658.357324573577 663.360977460377 133.51 0.71112 133.51 133.21 133.92 0 106 27 7 0 0 0 0.031826 1 80465 47.603 27.082 1 1.1313 1 0 3767100 1638400 2128700 40286 1679 15181 15590 63221 63221 YIGENLQLLVDRPDGTYCFR 20 0 2 Unmodified _YIGENLQLLVDRPDGTYCFR_ 0 0 1 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 817.4096 3 810.40212 2428.18453 67911.22 0.84009 0.00068081 -0.14692 -0.00011906 0.69317 0.00056175 810.736313391949 817.408489119046 111.18 0.85827 111.18 110.84 111.69 0 383 59 10 0 0 0 7.4569E-41 2 69817 156.11 156.11 1 0.89988 0.98043 0 94887000 53944000 40943000 40287 2119 15182 15591 63222;63223 63223 YIGENLQLLVDRPDGTYCFR 20 0 2 Unmodified _YIGENLQLLVDRPDGTYCFR_ 0 0 1 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 817.0757 3 810.40212 2428.18453 68397.63 0.71378 0.00057845 0.0062568 5.0705E-06 0.72003 0.00058352 810.736398399402 817.074661666337 110.43 0.76118 110.43 110.08 110.84 -7.6294E-06 435 53 11 0 0 0 5.3499E-13 2 70925 101.64 101.64 1 0.91394 1.0675 0 105260000 60051000 45211000 40288 2119 15182 15591 63224;63225 63224 YIGENLQLLVDRPDGTYCFR 20 0 2 Unmodified _YIGENLQLLVDRPDGTYCFR_ 0 0 1 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 817.0768 3 810.40212 2428.18453 66659.7 0.84947 0.00068841 -0.24993 -0.00020255 0.59953 0.00048586 810.736337875113 817.408494507982 121.64 0.70792 121.64 121.4 122.11 0 291 36 12 0 0 0 1.395E-06 2 72316 62.765 62.765 1 1.1963 0.96798 0 52026000 22583000 29444000 40289 2119 15182 15591 63226;63227 63226 YIGENLQLLVDRPDGTYCFR 20 0 2 Unmodified _YIGENLQLLVDRPDGTYCFR_ 0 0 1 Q9Y221;B3KM49;J3QLW7 Q9Y221 Q9Y221 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 817.4083 3 810.40212 2428.18453 66229.31 0.84338 0.00068347 -0.27858 -0.00022576 0.5648 0.00045771 810.736332400709 817.074375789826 121.4 0.79407 121.4 121.15 121.94 0 313 40 12 0 0 0 1.8172E-06 2 71276 60.034 60.034 1 1.1806 1.1068 0 47941000 20406000 27535000 40290 2119 15182 15591 63228;63229 63228 YIGEVGDIVVGR 12 0 1 Unmodified _YIGEVGDIVVGR_ 0 0 0 Q13868;A3KFL5;A3KFL2;B4E001;A3KFL1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8485 2 638.848427 1275.6823 76777.59 0.60746 0.00038807 0.13768 8.7957E-05 0.74514 0.00047603 638.848001858668 644.354627077445 89.952 0.52719 89.952 89.674 90.201 7.6294E-06 158 41 6 0 0 0 0.00013626 1 54272 93.667 78.993 1 0.98802 1.0107 0 33623000 17342000 16281000 40291 1722 15183 15592 63230 63230 YIGEVGDIVVGR 12 0 1 Unmodified _YIGEVGDIVVGR_ 0 0 0 Q13868;A3KFL5;A3KFL2;B4E001;A3KFL1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.8478 2 638.848427 1275.6823 76296.33 0.75306 0.00048109 0.014515 9.2729E-06 0.76758 0.00049037 638.848166639898 643.852216209901 88.976 0.51465 88.976 88.746 89.261 0 191 42 6 0 0 0 0.00022526 2 54818 85.377 70.19 1 1.083 1.1841 0 35441000 17944000 17497000 40292 1722 15183 15592 63231;63232 63231 YIGEVGDIVVGR 12 0 1 Unmodified _YIGEVGDIVVGR_ 0 0 0 Q13868;A3KFL5;A3KFL2;B4E001;A3KFL1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.8528 2 638.848427 1275.6823 75786.98 0.5438 0.00034741 0.24163 0.00015437 0.78543 0.00050177 638.848364144896 643.852682814169 102.66 0.59538 102.66 102.39 102.99 7.6294E-06 164 41 6 0 0 0 0.00024224 2 58228 73.887 62.735 1 0.95027 0.81759 0 7036700 3435800 3601000 40293 1722 15183 15592 63233;63234 63233 YIGEVGDIVVGR 12 0 1 Unmodified _YIGEVGDIVVGR_ 0 0 0 Q13868;A3KFL5;A3KFL2;B4E001;A3KFL1 Q13868 Q13868 EXOSC2 Exosome complex component RRP4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 638.8484 2 638.848427 1275.6823 75113.94 0.45645 0.0002916 -0.065973 -4.2147E-05 0.39048 0.00024946 638.848422305501 643.851425527411 102.53 0.78523 102.53 102.2 102.99 0 181 53 6 0 0 0 0.003709 2 57241 55.353 40.679 1 1.1013 0.91763 0 6894400 3497000 3397400 40294 1722 15183 15592 63235;63236 63235 YIHFPVTVVSAPGLAPSATPGAPR 24 0 1 Unmodified _YIHFPVTVVSAPGLAPSATPGAPR_ 0 0 0 Q9UMN6 Q9UMN6 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.1101 3 802.437382 2404.29032 71096.3 0.8117 0.00065134 1.1051 0.00088676 1.9168 0.0015381 802.772766481335 806.108441465493 121.83 0.33488 121.83 121.65 121.99 0 66 14 7 0 0 0 0.039717 1 71686 11.966 11.966 1 1.496 1.2468 0 6368000 2648200 3719800 40295 2113 15184 15593 63237 63237 YIIEELNVR 9 0 1 Unmodified _YIIEELNVR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.8228 2 574.819138 1147.62372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.483 1 87.483 86.983 87.983 0 0 0 0 0.04842 1 52793 47.082 8.1193 1 40296 1561 15185 15594 63238 63238 YIIEELNVR 9 0 1 Unmodified _YIIEELNVR_ 0 0 0 Q59G75;P41252;J3KR24;A0A0A0MSX9;Q7Z3U5;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8 Q59G75 Q59G75 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 574.8179 2 574.819138 1147.62372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.516 1 86.516 86.016 87.016 0 0 0 0 0.013285 1 53329 60.478 7.6918 1 40297 1561 15185 15594 63239 63239 YILAATLDNTLK 12 1 0 Unmodified _YILAATLDNTLK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.3793 2 668.37956 1334.74457 NaN NaN NaN -0.25192 -0.00016837 NaN NaN NaN NaN 101.52 0.76134 101.52 101.13 101.89 0 0 0 0 0.00018642 2 62381 91.658 91.658 1 NaN NaN 0 10364000 10364000 0 40298 1630 15186 15595 63240;63241 63240 YILAATLDNTLK 12 1 0 Unmodified _YILAATLDNTLK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 668.3803 2 668.37956 1334.74457 NaN NaN NaN 0.11544 7.716E-05 NaN NaN NaN NaN 100.65 0.74986 100.65 100.34 101.09 0 0 0 0 0.0013428 1 63163 79.148 57.642 1 NaN NaN 0 11400000 11400000 0 40299 1630 15186 15595 63242 63242 YILAATLDNTLK 12 1 0 Unmodified _YILAATLDNTLK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 672.3875 2 668.37956 1334.74457 73929.03 1.0795 0.00072153 -0.41665 -0.00027848 0.66287 0.00044305 668.379614001326 672.386018329721 113.84 0.84958 113.84 113.58 114.43 -7.6294E-06 164 37 8 0 0 0 0.0001255 2 66324 94.297 88.971 1 1.887 1.4624 0 13546000 4543800 9002400 40300 1630 15186 15595 63243;63244 63243 YILAATLDNTLK 12 1 0 Unmodified _YILAATLDNTLK_ 0 0 0 P61964 P61964 P61964 WDR5 WD repeat-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 672.3868 2 668.37956 1334.74457 75588.21 0.65696 0.0004391 -0.60738 -0.00040596 0.049577 3.3136E-05 668.379598189926 672.385903273215 113.65 0.77374 113.65 113.35 114.13 0 178 35 8 0 0 0 8.1241E-05 2 65275 96.89 96.89 1 1.9121 1.5772 0 11064000 3637300 7426800 40301 1630 15186 15595 63245;63246 63245 YILAEPDPHAPDPEK 15 1 0 Unmodified _YILAEPDPHAPDPEK_ 0 0 0 A8K6T5;Q9UBL3;F5H8F7;B4DPT1 A8K6T5 A8K6T5 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.9488 3 564.614027 1690.82025 81200.97 0.56352 0.00031817 0.85117 0.00048058 1.4147 0.00079875 564.948447414431 567.285770383646 61.981 0.59495 61.981 61.693 62.288 -3.8147E-06 241 54 7 0 0 0 0.0006944 1 36350 39.629 32.9 1 1.1471 1.2373 0 22646000 12917000 9729500 40302 763 15187 15596 63247 63247 YILAEPDPHAPDPEK 15 1 0 Unmodified _YILAEPDPHAPDPEK_ 0 0 0 A8K6T5;Q9UBL3;F5H8F7;B4DPT1 A8K6T5 A8K6T5 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 564.9491 3 564.614027 1690.82025 NaN NaN NaN 0.57275 0.00032338 NaN NaN NaN NaN 72.778 0.40546 72.778 72.558 72.963 0 0 0 0 0.048873 1 38386 25.866 21.475 1 NaN NaN 0 1491800 1491800 0 40303 763 15187 15596 63248 63248 YILAGGNSSGK 11 1 0 Unmodified _YILAGGNSSGK_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 533.7789 2 533.780013 1065.54547 86578.75 0.59915 0.00031981 -1.4482 -0.000773 -0.84902 -0.00045319 533.779267616797 537.785963046444 30.415 0.21253 30.415 30.307 30.52 -1.9073E-06 48 17 4 0 0 0 0.00054053 1 14858 74.376 65.957 1 0.78682 0.81479 0 14744000 7900600 6843900 40304 508 15188 15597 63249 63249 YILAGGNSSGK 11 1 0 Unmodified _YILAGGNSSGK_ 0 0 0 A0A0C4DFX7;Q9H967 A0A0C4DFX7 A0A0C4DFX7 WDR76 WD repeat-containing protein 76 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 533.7805 2 533.780013 1065.54547 NaN NaN NaN 1.0696 0.00057094 NaN NaN NaN NaN 29.939 0.28337 29.939 29.774 30.058 0 0 0 0 0.029683 1 14561 59.426 28.197 1 NaN NaN 0 18686000 18686000 0 40305 508 15188 15597 63250 63250 YILDYPLGDK 10 1 0 Unmodified _YILDYPLGDK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.8218 2 598.813522 1195.61249 77060.76 0.60461 0.00036205 -0.034941 -2.0923E-05 0.56967 0.00034113 598.813755742687 602.820282699214 105.47 0.71243 105.47 105.18 105.89 0 175 46 5 0 0 0 0.022058 1 60100 45.997 45.997 1 1.6467 1.3048 0 4860500 1588000 3272600 40306 1412 15189 15598 63251 63251 YILDYPLGDK 10 1 0 Unmodified _YILDYPLGDK_ 0 0 0 O75691;B4DN27 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.8208 2 598.813522 1195.61249 77041.73 0.61468 0.00036808 0.094947 5.6855E-05 0.70962 0.00042493 598.81376240903 602.82042789572 105.28 0.74991 105.28 105.05 105.8 -7.6294E-06 196 53 6 0 0 0 0.016025 1 59217 48.423 48.423 1 1.7291 1.3902 0 4241200 1712200 2529000 40307 1412 15189 15598 63252 63252 YILNVTPNLPNFFEK 15 1 0 Unmodified _YILNVTPNLPNFFEK_ 0 0 0 Q6P9C2;B2RAL9;Q99956;Q8N4A4 Q6P9C2 Q6P9C2 DUSP9 Dual specificity protein phosphatase;Dual specificity protein phosphatase 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.9827 2 904.982712 1807.95087 64766.07 0.94595 0.00085607 0.023429 2.1202E-05 0.96938 0.00087727 904.982072755382 908.990187843528 127.5 0.3968 127.5 127.33 127.72 -7.6294E-06 108 26 6 0 0 0 4.4241E-05 1 83036 85.813 85.813 1 0.47946 0.49388 0 10826000 6337400 4489000 40308 872 15190 15599 63253 63253 YILNVTPNLPNFFEK 15 1 0 Unmodified _YILNVTPNLPNFFEK_ 0 0 0 Q6P9C2;B2RAL9;Q99956;Q8N4A4 Q6P9C2 Q6P9C2 DUSP9 Dual specificity protein phosphatase;Dual specificity protein phosphatase 9 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 904.9832 2 904.982712 1807.95087 64147.95 0.82576 0.0007473 0.10954 9.9131E-05 0.9353 0.00084643 904.982225791313 908.989260753176 127.14 0.45804 127.14 126.89 127.35 7.6294E-06 124 28 8 0 0 0 0.00022711 1 84823 74.76 74.76 1 0.52987 0.54077 0 12023000 7409800 4613200 40309 872 15190 15599 63254 63254 YILQGVTSWGLGCAR 15 0 1 Unmodified _YILQGVTSWGLGCAR_ 0 0 0 CON__P06868;B2R7F8;P00747;B4DPH4;Q68DS2;Q1HP67;P08519 CON__P06868 CON__P06868 PLG;DKFZp779M0222;LPA Plasminogen;Plasmin heavy chain A;Activation peptide;Angiostatin;Plasmin heavy chain A, short form;Plasmin light chain B;Apolipoprotein(a) ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.9304 2 840.929957 1679.84536 NaN NaN NaN 0.12389 0.00010418 NaN NaN NaN NaN 122.79 0.35851 122.79 122.57 122.93 0 0 0 0 0.017701 1 73303 59.198 40.887 1 NaN NaN 0 1423400 1423400 0 + 40310 1157 15191 15600 63255 63255 YILQGVTSWGLGCAR 15 0 1 Unmodified _YILQGVTSWGLGCAR_ 0 0 0 CON__P06868;B2R7F8;P00747;B4DPH4;Q68DS2;Q1HP67;P08519 CON__P06868 CON__P06868 PLG;DKFZp779M0222;LPA Plasminogen;Plasmin heavy chain A;Activation peptide;Angiostatin;Plasmin heavy chain A, short form;Plasmin light chain B;Apolipoprotein(a) ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 841.4321 2 840.929957 1679.84536 NaN NaN NaN -0.32829 -0.00027607 NaN NaN NaN NaN 122.57 0.42076 122.57 122.32 122.74 0 0 0 0 0.016523 1 72253 57.019 38.708 1 NaN NaN 0 1576800 1576800 0 + 40311 1157 15191 15600 63256 63256 YILVTGGVISGIGK 14 1 0 Unmodified _YILVTGGVISGIGK_ 0 0 0 P17812;B4DMB5;B7Z9C4;A0A024RC00;Q9NRF8 P17812 P17812 CTPS1;CTPS2 CTP synthase 1;CTP synthase;CTP synthase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 688.9117 2 688.911027 1375.8075 73765.85 0.6805 0.00046881 0.38962 0.00026841 1.0701 0.00073722 688.911376785934 692.918134337949 106.89 0.69088 106.89 106.58 107.27 -7.6294E-06 207 51 6 0 0 0 0.00024168 2 66446 63.408 61.958 1 1.9312 1.9604 0 18128000 6152100 11976000 40312 1494 15192 15601 63257;63258 63257 YILVTGGVISGIGK 14 1 0 Unmodified _YILVTGGVISGIGK_ 0 0 0 P17812;B4DMB5;B7Z9C4;A0A024RC00;Q9NRF8 P17812 P17812 CTPS1;CTPS2 CTP synthase 1;CTP synthase;CTP synthase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 689.4129 2 688.911027 1375.8075 74242.61 0.79153 0.00054529 0.12297 8.4714E-05 0.9145 0.00063001 689.41271885797 692.91793351521 106.18 0.65765 106.18 105.93 106.58 0 219 50 6 0 0 0 0.00013275 1 67542 79.693 71.112 1 2.2299 2.2524 0 28539000 8804900 19734000 40313 1494 15192 15601 63259 63259 YILVTGGVISGIGK 14 1 0 Unmodified _YILVTGGVISGIGK_ 0 0 0 P17812;B4DMB5;B7Z9C4;A0A024RC00;Q9NRF8 P17812 P17812 CTPS1;CTPS2 CTP synthase 1;CTP synthase;CTP synthase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 692.9184 2 688.911027 1375.8075 74398.08 0.77329 0.00053273 -0.18639 -0.0001284 0.5869 0.00040432 688.910651967366 692.917993090755 118.17 0.44341 118.17 117.96 118.4 0 69 17 6 0 0 0 0.0011984 2 69694 55.401 53.99 1 1.0971 0.86148 0 3152400 1448300 1704100 40314 1494 15192 15601 63260;63261 63260 YILVTGGVISGIGK 14 1 0 Unmodified _YILVTGGVISGIGK_ 0 0 0 P17812;B4DMB5;B7Z9C4;A0A024RC00;Q9NRF8 P17812 P17812 CTPS1;CTPS2 CTP synthase 1;CTP synthase;CTP synthase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 688.9111 2 688.911027 1375.8075 73858.01 0.46725 0.00032189 -0.10571 -7.2827E-05 0.36154 0.00024907 688.910496713696 692.91811501572 117.95 0.45926 117.95 117.75 118.2 -7.6294E-06 76 20 7 0 0 0 0.0024938 2 68680 48.741 44.442 1 1.2228 0.95782 0 3760700 1617900 2142800 40315 1494 15192 15601 63262;63263 63263 YIMLNPSSR 9 0 1 Oxidation (M) _YIM(ox)LNPSSR_ YIM(1)LNPSSR YIM(67.17)LNPSSR 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 548.7767 2 548.776416 1095.53828 79390.55 0.63213 0.0003469 0.91973 0.00050472 1.5519 0.00085162 548.776434991917 553.780610727441 46.184 0.98054 46.184 45.704 46.684 0 348 85 6 0 0 0 0.0025497 2 24780 67.169 59.602 1 1.4305 1.6407 0 135840000 56400000 79444000 40316 1470 15193 15602 63264;63265 63264 1190 YIMLNPSSR 9 0 1 Oxidation (M) _YIM(ox)LNPSSR_ YIM(1)LNPSSR YIM(103.83)LNPSSR 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.7805 2 548.776416 1095.53828 81285.61 0.5242 0.00028767 -0.12066 -6.6217E-05 0.40353 0.00022145 548.776415614491 553.780631394052 46.876 0.96658 46.876 46.471 47.437 0 363 82 8 0 0 0 0.00013312 2 25385 103.83 85.051 1 1.4174 1.6425 0 169870000 73414000 96456000 40317 1470 15193 15602 63266;63267 63267 1190 YIMLNPSSR 9 0 1 Oxidation (M) _YIM(ox)LNPSSR_ YIM(1)LNPSSR YIM(86.1)LNPSSR 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 548.7766 2 548.776416 1095.53828 78807.88 0.48758 0.00026757 0.44201 0.00024257 0.92959 0.00051014 548.776530949625 553.780600982957 45.249 0.91249 45.249 44.716 45.628 -3.8147E-06 347 76 8 0 0 0 0.00067109 2 24680 86.095 67.313 1 1.4835 1.7012 0 178820000 71502000 107320000 40318 1470 15193 15602 63268;63269 63268 1190 YIMLNPSSR 9 0 1 Oxidation (M) _YIM(ox)LNPSSR_ YIM(1)LNPSSR YIM(61.96)LNPSSR 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.2884 2 548.776416 1095.53828 78257.23 0.40824 0.00022403 0.19114 0.00010489 0.59938 0.00032893 548.776428276128 553.780616995731 45.9 0.79497 45.9 45.574 46.369 0 307 65 8 0 0 0 0.0036175 2 25053 61.962 49.915 1 1.3967 1.6005 0 172810000 73013000 99796000 40319 1470 15193 15602 63270;63271 63270 1190 YIMLNPSSR 9 0 1 Oxidation (M) _YIM(ox)LNPSSR_ YIM(1)LNPSSR YIM(51.35)LNPSSR 0 1 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 553.7809 2 548.776416 1095.53828 81355.2 0.39839 0.00021862 0.034442 1.8901E-05 0.43283 0.00023753 548.776382373228 553.780577210652 54.058 1.197 54.058 53.559 54.756 0 276 82 5 0 0 0 0.0093191 1 26318 51.346 44.152 1 1.0853 0.90166 0 15387000 7741700 7645800 40320 1470 15193 15602 63272 63272 1190 YIMLNPSSR 9 0 1 Unmodified _YIMLNPSSR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 545.7829 2 540.778959 1079.54336 84361.81 1.0648 0.0005758 -1.3535 -0.00073195 -0.28874 -0.00015615 540.778600529738 546.28284265239 60.352 0.31857 60.352 60.162 60.48 0 72 28 4 0 0 0 0.017976 1 34435 52.482 23.333 1 0.87857 0.88649 0 9525800 3877500 5648300 40321 1470 15193 15603 63273 63273 YIMLNPSSR 9 0 1 Unmodified _YIMLNPSSR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.7824 2 540.778959 1079.54336 87266.55 0.73982 0.00040008 -0.90564 -0.00048975 -0.16582 -8.967E-05 540.778504133385 545.782802397017 59.075 0.30368 59.075 58.961 59.265 -3.8147E-06 76 27 4 0 0 0 0.012314 1 34380 57.59 22.782 1 0.8645 0.85659 0 12158000 5760200 6397800 40322 1470 15193 15603 63274 63274 YIMLNPSSR 9 0 1 Unmodified _YIMLNPSSR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.7788 2 540.778959 1079.54336 80389.76 0.41729 0.00022566 0.25775 0.00013939 0.67504 0.00036505 540.77902239503 545.783192058979 69.615 0.80772 69.615 69.217 70.025 0 261 67 6 0 0 0 0.015433 2 36456 54.776 29.854 1 1.6353 1.3401 0 16700000 6321300 10379000 40323 1470 15193 15603 63275;63276 63275 YIMLNPSSR 9 0 1 Unmodified _YIMLNPSSR_ 0 0 0 P11387;B9EG90 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.783 2 540.778959 1079.54336 81805.55 0.42139 0.00022788 0.12657 6.8444E-05 0.54795 0.00029632 540.778955669424 545.783115899907 69.999 0.78187 69.999 69.652 70.434 0 251 61 7 0 0 0 0.0070864 2 35918 62.546 28.996 1 1.5611 1.2902 0 14650000 5177500 9472800 40324 1470 15193 15603 63277;63278 63278 YINENLIVNTDELGR 15 0 1 Unmodified _YINENLIVNTDELGR_ 0 0 0 P17987;F5H136;E7ERF2;F5H7Y1 P17987 P17987 TCP1 T-complex protein 1 subunit alpha ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 886.9571 2 881.95214 1761.88973 NaN NaN NaN -1.4038 -0.0012381 NaN NaN NaN NaN 97.878 0.68185 97.878 97.6 98.282 7.6294E-06 0 0 0 2.7979E-10 2 61253 107.53 97.297 1 NaN NaN 0 7456600 0 7456600 40325 1496 15194 15604 63279;63280 63280 YIPPIPVHR 9 0 1 Unmodified _YIPPIPVHR_ 0 0 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 364.8842 3 364.550193 1090.62875 NaN NaN NaN -0.37374 -0.00013625 NaN NaN NaN NaN 61.215 0.36262 61.215 60.932 61.295 0 0 0 0 0.0053002 2 35712 51.066 45.285 1 NaN NaN 0 6160000 6160000 0 40326 1699 15195 15605 63281;63282 63282 YIQDFQR 7 0 1 Unmodified _YIQDFQR_ 0 0 0 E9PKP7;P17480;A8K962;B4DNQ1;O00164;Q05BZ1;E9PMM2 E9PKP7 E9PKP7 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.2433 2 485.243067 968.47158 86344.06 0.45903 0.00022274 0.015021 7.289E-06 0.47405 0.00023003 485.243120474255 490.247092733085 34.86 0.69258 34.86 34.621 35.314 0 315 60 7 0 0 0 0.016891 2 17676 97.602 30.608 1 0.61665 0.70325 0 139660000 90079000 49580000 40327 1244 15196 15606 63283;63284 63284 YIQELWR 7 0 1 Unmodified _YIQELWR_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1;E7ERA2 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 504.2691 2 504.269084 1006.52362 85113.8 0.44199 0.00022288 -0.0012217 -6.1607E-07 0.44077 0.00022226 504.269092129235 509.273133140789 75.908 2.1135 75.908 75.535 77.649 0 797 178 9 0 0 0 0.0077251 4 45133 128.75 101.23 1 0.70377 0.83314 0 371630000 219100000 152540000 40328 121 15197 15607 63285;63286;63287;63288 63287 YIQELWR 7 0 1 Unmodified _YIQELWR_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1;E7ERA2 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 504.2693 2 504.269084 1006.52362 85313.4 0.32294 0.00016285 -0.034632 -1.7464E-05 0.28831 0.00014539 504.269054269047 509.273074797459 74.589 1.7119 74.589 74.245 75.957 0 721 152 9 0 0 0 0.0099287 4 45337 114.02 95.987 1 0.70614 0.82436 0 534870000 318230000 216640000 40329 121 15197 15607 63289;63290;63291;63292 63291 YIQELWR 7 0 1 Unmodified _YIQELWR_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1;E7ERA2 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 509.2737 2 504.269084 1006.52362 84532.91 0.28954 0.00014601 0.18476 9.317E-05 0.47431 0.00023918 504.269125837915 509.273180882912 86.415 1.3912 86.415 85.839 87.23 0 431 88 8 0 0 0 0.023524 2 47200 90.986 78.63 1 0.7976 0.66788 0 24885000 14483000 10403000 40330 121 15197 15607 63293;63294 63294 YIQELWR 7 0 1 Unmodified _YIQELWR_ 0 0 0 A0A024R2Q4;P61313;E7EQV9;B4DLP4;E7ENU7;E7EX53;B4DEN1;E7ERA2 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 509.2735 2 504.269084 1006.52362 84766.13 0.31897 0.00016085 0.1311 6.6107E-05 0.45007 0.00022695 504.269129074775 509.273131096937 86.444 1.1684 86.445 85.884 87.053 7.6294E-06 345 70 8 0 0 0 0.026953 2 46405 83.614 72.741 1 0.76169 0.6587 0 23135000 13029000 10106000 40331 121 15197 15607 63295;63296 63295 YIQPWESEFIDSQR 14 0 1 Unmodified _YIQPWESEFIDSQR_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 904.4307 2 899.425758 1796.83696 65945.32 0.78656 0.00070745 -0.073728 -6.6313E-05 0.71283 0.00064114 899.425475010708 904.43021328949 103.5 0.63931 103.5 103.2 103.84 0 232 51 6 0 0 0 0.00017836 1 63729 86.313 86.313 1 0.63109 0.63326 0 16109000 9634600 6474500 40332 1854 15198 15608 63297 63297 YIQPWESEFIDSQR 14 0 1 Unmodified _YIQPWESEFIDSQR_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 899.4278 2 899.425758 1796.83696 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.24 1 103.24 102.74 103.74 -7.6294E-06 0 0 0 0.0076164 1 63661 53.569 40.141 1 40333 1854 15198 15608 63298 63298 YIQPWESEFIDSQR 14 0 1 Unmodified _YIQPWESEFIDSQR_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 899.4259 2 899.425758 1796.83696 65691.91 0.87353 0.00078568 0.003723 3.3485E-06 0.87726 0.00078903 899.425506112394 904.429910117098 102.8 0.68824 102.8 102.43 103.11 0 232 54 6 0 0 0 0.00020893 2 64755 69.451 69.451 1 0.71579 0.71525 0 16872000 10707000 6165300 40334 1854 15198 15608 63299;63300 63299 YIQPWESEFIDSQR 14 0 1 Unmodified _YIQPWESEFIDSQR_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 899.9277 2 899.425758 1796.83696 63991 0.70061 0.00063015 -0.35235 -0.00031691 0.34826 0.00031323 899.92735463528 904.428913586862 115.12 0.58694 115.12 114.91 115.5 -7.6294E-06 104 27 6 0 0 0 0.0049667 1 67388 44.564 41.242 1 0.84208 0.70914 0 4604200 2525800 2078400 40335 1854 15198 15608 63301 63301 YIQPWESEFIDSQR 14 0 1 Unmodified _YIQPWESEFIDSQR_ 0 0 0 Q6P2Q9;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 899.9257 2 899.425758 1796.83696 64636.9 0.36089 0.0003246 0.078543 7.0644E-05 0.43943 0.00039524 899.926918231017 904.42991537856 115.05 0.68405 115.05 114.6 115.28 -7.6294E-06 112 31 6 0 0 0 0.0055705 1 66360 43.544 43.544 1 0.81349 0.68772 0 4713200 2997100 1716100 40336 1854 15198 15608 63302 63302 YISENCETSTMNIDR 15 0 1 Oxidation (M) _YISENCETSTM(ox)NIDR_ YISENCETSTM(1)NIDR YISENCETSTM(56.2)NIDR 0 1 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8;H0Y4K5 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 924.8913 2 924.890565 1847.76658 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.453 1 37.453 36.953 37.953 0 0 0 0 0.001049 1 19070 56.205 50.101 1 40337 364 15199 15609 63303 63303 272 YISENCETSTMNIDR 15 0 1 Oxidation (M) _YISENCETSTM(ox)NIDR_ YISENCETSTM(1)NIDR YISENCETSTM(69.45)NIDR 0 1 0 Q59FM7;A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8;H0Y4K5 Q59FM7 Q59FM7 EHMT2 Histone-lysine N-methyltransferase EHMT2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.3932 2 924.890565 1847.76658 63349.96 0.95967 0.00088759 0.22326 0.00020649 1.1829 0.0010941 925.391386985286 929.896325858904 36.592 0.18201 36.592 36.501 36.683 0 28 13 4 0 0 0 0.00010837 1 18828 69.451 61.726 1 0.76488 0.79628 0 4456100 1777300 2678800 40338 364 15199 15609 63304 63304 272 YISSQIERPIR 11 0 2 Unmodified _YISSQIERPIR_ 0 0 1 O75643;A4FU77;B4E150;B4E0P5 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 461.2609 3 454.589376 1360.7463 89394.43 0.24575 0.00011172 0.12694 5.7704E-05 0.37269 0.00016942 454.58928825504 461.2615648024 42.202 0.73852 42.202 41.821 42.559 -3.8147E-06 278 65 6 0 0 0 0.014588 1 22623 30.55 25.256 1 0.90254 1.0418 0 66403000 27717000 38686000 40339 1411 15200 15610 63305 63305 YITAHGLPPTASALGPGPPPPEPLPGSGPR 30 0 1 Unmodified _YITAHGLPPTASALGPGPPPPEPLPGSGPR_ 0 0 0 Q15906 Q15906 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 968.1816 3 967.846769 2900.51848 63370.06 0.40296 0.00039001 -0.14328 -0.00013867 0.25969 0.00025134 968.514912425805 971.516784588448 98.933 0.57178 98.933 98.648 99.219 0 82 47 4 0 0 0 0.00044144 3 61982 24.835 24.835 1 0.7879 0.77462 0 13494000 8918300 4575300 40340 1767 15201 15611 63306;63307;63308 63307 YITAHGLPPTASALGPGPPPPEPLPGSGPR 30 0 1 Unmodified _YITAHGLPPTASALGPGPPPPEPLPGSGPR_ 0 0 0 Q15906 Q15906 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 971.5187 3 967.846769 2900.51848 63790.14 0.23073 0.00022331 0.43375 0.0004198 0.66447 0.00064311 968.181223582367 971.517149323678 111.71 0.60378 111.71 111.37 111.97 0 115 34 6 0 0 0 0.013032 2 64680 19.507 19.507 1 1.0322 0.87722 0 2871400 1388700 1482700 40341 1767 15201 15611 63309;63310 63309 YITAHGLPPTASALGPGPPPPEPLPGSGPR 30 0 1 Unmodified _YITAHGLPPTASALGPGPPPPEPLPGSGPR_ 0 0 0 Q15906 Q15906 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 968.1806 3 967.846769 2900.51848 63122.76 0.090923 8.7999E-05 0.48306 0.00046753 0.57398 0.00055553 968.516021940058 971.517657425394 111.53 0.6245 111.53 111.21 111.83 0 82 34 5 0 0 0 0.022241 2 63683 16.006 16.006 1 0.9582 0.79626 0 5966700 2903400 3063200 40342 1767 15201 15611 63311;63312 63312 YITASTFAQAR 11 0 1 Unmodified _YITASTFAQAR_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8191 2 614.81967 1227.62479 NaN NaN NaN -0.14549 -8.9448E-05 NaN NaN NaN NaN 60.155 0.63741 60.155 59.862 60.5 0 0 0 0 0.004329 1 34195 66.299 57.353 1 NaN NaN 0 10309000 10309000 0 40343 1965 15202 15612 63313 63313 YITASTFAQAR 11 0 1 Unmodified _YITASTFAQAR_ 0 0 0 Q96F88;Q99575;E5RK39 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.8194 2 614.81967 1227.62479 77607.24 0.2635 0.000162 -0.18082 -0.00011117 0.082676 5.0831E-05 614.819578862934 619.824092361653 70.275 0.38532 70.275 70.12 70.505 7.6294E-06 107 34 4 0 0 0 0.041808 1 36142 35.826 35.826 1 0.6024 0.50401 0 4914500 2959000 1955600 40344 1965 15202 15612 63314 63314 YIVLLR 6 0 1 Unmodified _YIVLLR_ 0 0 0 A0A024R4U3;Q14166 A0A024R4U3 A0A024R4U3 TTLL12 Tubulin--tyrosine ligase-like protein 12 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 388.7544 2 388.755082 775.49561 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.732 1 78.732 78.232 79.232 0 0 0 0 0.044456 1 47773 76.553 0 1 40345 161 15203 15613 63315 63315 YKAEDEVQR 9 1 1 Unmodified _YKAEDEVQR_ 0 0 1 A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4DFN9;B4DNT8;B4DI39;B4DWK5;B4DVU9;B4E1S9;B4E388;V9GZ37;B3KTT5;B4DNX1;B4E1T6 A8K5I0 A8K5I0 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.2816 2 569.280377 1136.5462 79754.92 0.56386 0.00032099 0.15192 8.6482E-05 0.71578 0.00040748 569.280448309228 578.291589281684 16.649 0.27535 16.649 16.551 16.826 0 46 10 7 0 0 0 0.0018717 1 3933 101.25 83.867 1 0.84819 0.91505 0 10958000 5965100 4993400 40346 533 15204 15614 63316 63316 YKDDPVDLR 9 1 1 Unmodified _YKDDPVDLR_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.7946 2 560.785296 1119.55604 82894.76 0.74397 0.00041721 -1.332 -0.00074697 -0.58804 -0.00032976 560.783816745895 569.795616922903 35.513 0.69171 35.513 35.284 35.976 0 145 65 4 0 0 0 0.011907 4 18055 75.378 75.378 1 1.3737 1.5419 0 21608000 6403300 15205000 40347 2128 15205 15615 63317;63318;63319;63320 63320 YKDDPVDLR 9 1 1 Unmodified _YKDDPVDLR_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 569.7972 2 560.785296 1119.55604 79868.91 0.71268 0.00039966 0.15239 8.5456E-05 0.86507 0.00048512 560.785526498204 569.796365713911 34.204 0.3905 34.204 34.031 34.421 0 103 24 6 0 0 0 0.0062801 1 17222 89.08 72.303 1 1.1454 1.3402 0 52136000 26266000 25869000 40348 2128 15205 15615 63321 63321 YKEDGEALLILLPSEK 16 2 0 Unmodified _YKEDGEALLILLPSEK_ 0 0 1 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 612.0112 3 606.66802 1816.98223 76804.88 0.59187 0.00035907 0.20604 0.000125 0.7979 0.00048406 606.668022309395 612.010722221581 120.81 0.36266 120.81 120.65 121.01 0 81 17 7 0 0 0 0.010711 1 71891 19.071 19.071 1 0.85567 0.75362 0 2606000 1345300 1260700 40349 1708 15206 15616 63322 63322 YKEDGEALLILLPSEK 16 2 0 Unmodified _YKEDGEALLILLPSEK_ 0 0 1 Q13206;Q86VR6;E9PIF2;Q59EC7;B4DKX3 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 612.0116 3 606.66802 1816.98223 79244.47 0.72265 0.00043841 0.16928 0.0001027 0.89193 0.00054111 606.668102435121 612.011012574221 120.54 0.37643 120.54 120.37 120.75 0 84 21 6 0 0 0 0.00037035 1 70721 36.112 35.962 1 0.96819 0.83249 0 3569200 2111400 1457700 40350 1708 15206 15616 63323 63323 YKEETIEK 8 2 0 Unmodified _YKEETIEK_ 0 0 1 Q6IBH6;P61254;A0A024RBF6 Q6IBH6 Q6IBH6 RPL26;hCG_26523 60S ribosomal protein L26 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.269 2 520.268947 1038.52334 83745.59 0.11423 5.9432E-05 -0.067187 -3.4955E-05 0.047045 2.4476E-05 520.26893785587 528.283041599129 17.382 0.57163 17.382 17.143 17.714 0 103 19 9 0 0 0 1.6785E-39 2 4533 206.78 206.78 1 0.78703 0.92823 0 396210000 220500000 175710000 40351 1629 15207 15617 63324;63325 63324 YKEETIEK 8 2 0 Unmodified _YKEETIEK_ 0 0 1 Q6IBH6;P61254;A0A024RBF6 Q6IBH6 Q6IBH6 RPL26;hCG_26523 60S ribosomal protein L26 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.269 2 520.268947 1038.52334 83883.73 -0.065824 -3.4246E-05 0.3527 0.0001835 0.28688 0.00014925 520.269035984419 528.283270519689 18.474 0.28378 18.474 18.357 18.64 -1.9073E-06 62 12 8 0 0 0 0.012425 2 4464 100.98 100.98 1 0.57913 0.49508 0 12071000 7563000 4507800 40352 1629 15207 15617 63326;63327 63326 YKPLDLRPK 9 2 1 Unmodified _YKPLDLRPK_ 0 0 2 P42766 P42766 P42766 RPL35 60S ribosomal protein L35 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 377.2288 3 377.229119 1128.66553 97620.79 -0.013259 -5.0018E-06 -0.26731 -0.00010084 -0.28057 -0.00010584 377.228750155577 385.907970513182 34.579 0.59245 34.579 34.4 34.993 0 174 49 6 0 0 0 0.0063813 1 17303 63.816 63.816 1 0.53553 0.6392 0 45582000 27833000 17749000 40353 1567 15208 15618 63328 63328 YLAEFATGNDR 11 0 1 Unmodified _YLAEFATGNDR_ 0 0 0 V9HW98;P62258;G9K389;G9K388;B7ZA86;K7EM20;B3KT37 V9HW98 V9HW98 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 628.7994 2 628.798934 1255.58332 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.691 1 58.691 58.191 59.191 -3.8147E-06 0 0 0 0.021612 1 33325 52.79 27.168 1 40354 1637 15209 15619 63329 63329 YLAEVAAGDDKK 12 2 0 Unmodified _YLAEVAAGDDKK_ 0 0 1 D0PNI1;P63104;B0AZS6;E7EX29;B7Z2E6;H0YB80 D0PNI1 D0PNI1 YWHAZ 14-3-3 protein zeta/delta MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 640.3311 2 640.330067 1278.64558 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.257 1 27.257 26.757 27.757 0 0 0 0 0.00074036 1 12570 83.869 55.66 1 40355 1182 15210 15620 63330 63330 YLAEVACGDDRK 12 1 1 Unmodified _YLAEVACGDDRK_ 0 0 1 P27348;Q53S41;B4DMT8;B4DY04;E9PG15 P27348 P27348 YWHAQ 14-3-3 protein theta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.8419 2 698.829908 1395.64526 80312.38 0.72053 0.00050353 0.70619 0.00049351 1.4267 0.00099703 699.331922568882 707.841919814283 28.514 0.19898 28.514 28.39 28.589 0 34 13 4 0 0 0 0.00039441 1 13452 85.958 71.751 1 2.417 2.6068 0 11012000 4318600 6693700 40356 1523 15211 15621 63331 63331 YLAEVACGDDRK 12 1 1 Unmodified _YLAEVACGDDRK_ 0 0 1 P27348;Q53S41;B4DMT8;B4DY04;E9PG15 P27348 P27348 YWHAQ 14-3-3 protein theta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.8444 2 698.829908 1395.64526 NaN NaN NaN NaN NaN NaN NaN NaN NaN 27.741 1 27.741 27.241 28.241 1.9073E-06 0 0 0 0.0018561 1 13005 78.655 57.283 1 40357 1523 15211 15621 63332 63332 YLAFLR 6 0 1 Unmodified _YLAFLR_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;B4DNC8 Q53H34 Q53H34 RPL13A 60S ribosomal protein L13a MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 391.7315 2 391.731606 781.44866 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.889 1 83.889 83.389 84.389 0 0 0 0 0.049101 1 50239 74.849 22.259 1 40358 1558 15212 15622 63333 63333 YLAIAPPIIK 10 1 0 Unmodified _YLAIAPPIIK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 549.85 2 549.84971 1097.68487 81844.09 0.74696 0.00041072 -0.14965 -8.2283E-05 0.59731 0.00032843 549.849568496683 553.856583106114 107.11 0.96822 107.11 106.71 107.68 -7.6294E-06 430 73 8 0 0 0 0.001121 2 66680 75.854 75.854 1 0.70381 0.79723 0 99037000 58208000 40829000 40359 1770 15213 15623 63334;63335 63335 YLAIAPPIIK 10 1 0 Unmodified _YLAIAPPIIK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 549.8502 2 549.84971 1097.68487 81951.75 0.76884 0.00042275 -0.026999 -1.4845E-05 0.74184 0.0004079 549.849625981791 553.856595875141 106.32 0.8316 106.32 105.96 106.79 0 396 64 9 0 0 0 0.0028884 2 67507 67.032 67.032 1 0.73539 0.82946 0 126150000 72302000 53851000 40360 1770 15213 15623 63336;63337 63337 YLAIAPPIIK 10 1 0 Unmodified _YLAIAPPIIK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 549.8502 2 549.84971 1097.68487 81119.22 0.62234 0.00034219 0.11038 6.0694E-05 0.73272 0.00040289 549.84967799757 553.856758437633 118.49 1.0164 118.49 118.21 119.23 0 250 47 8 0 0 0 0.0013339 2 69877 74.127 74.127 1 1.2296 1.0036 0 32985000 14289000 18696000 40361 1770 15213 15623 63338;63339 63339 YLAIAPPIIK 10 1 0 Unmodified _YLAIAPPIIK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 549.8498 2 549.84971 1097.68487 81303.98 0.61273 0.00033691 0.0022858 1.2568E-06 0.61502 0.00033817 549.849686218873 553.856652678027 118.22 0.95395 118.22 117.93 118.88 0 237 45 8 0 0 0 0.0076263 4 68754 57.177 57.177 1 1.241 1.0334 0 39835000 18067000 21768000 40362 1770 15213 15623 63340;63341;63342;63343 63342 YLAPSGPSGTLK 12 1 0 Unmodified _YLAPSGPSGTLK_ 0 0 0 B3KTA3;Q16658 B3KTA3 B3KTA3 FSCN1 Fascin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8317 2 595.824421 1189.63429 NaN NaN NaN 0.079691 4.7482E-05 NaN NaN NaN NaN 50.083 0.58918 50.083 49.728 50.317 0 0 0 0 4.9287E-05 1 28220 94.692 67.438 1 NaN NaN 0 32475000 0 32475000 40363 942 15214 15624 63344 63344 YLASGSGDTTVR 12 0 1 Unmodified _YLASGSGDTTVR_ 0 0 0 B4E074;Q9NVX2;B4E303 B4E074 B4E074 NLE1 Notchless protein homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 618.8085 2 613.804217 1225.59388 77756.17 0.72039 0.00044218 0.43239 0.0002654 1.1528 0.00070759 613.803895468868 618.808871872641 28.238 0.22556 28.238 28.119 28.344 1.9073E-06 64 15 6 0 0 0 2.4328E-05 2 13272 101.38 84.141 1 1.2271 1.2737 0 20735000 10198000 10537000 40364 1060 15215 15625 63345;63346 63345 YLASGSGDTTVR 12 0 1 Unmodified _YLASGSGDTTVR_ 0 0 0 B4E074;Q9NVX2;B4E303 B4E074 B4E074 NLE1 Notchless protein homolog 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.8084 2 613.804217 1225.59388 77653.05 0.030048 1.8443E-05 -0.020587 -1.2636E-05 0.0094611 5.8073E-06 613.804014295577 618.808434769304 27.637 0.23353 27.637 27.524 27.757 0 59 12 6 0 0 0 0.00018123 2 12954 74.944 59.612 1 1.4468 1.6219 0 45307000 18769000 26539000 40365 1060 15215 15625 63347;63348 63348 YLASGSGDTTVR 12 0 1 Unmodified _YLASGSGDTTVR_ 0 0 0 B4E074;Q9NVX2;B4E303 B4E074 B4E074 NLE1 Notchless protein homolog 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 613.8053 2 613.804217 1225.59388 77674.45 0.20871 0.00012811 0.46889 0.00028781 0.6776 0.00041591 613.804701976604 618.808427413838 32.097 0.34278 32.097 31.926 32.269 0 72 18 5 0 0 0 0.014861 2 13731 43.297 36.616 1 1.31 1.1169 0 5579500 2300600 3278900 40366 1060 15215 15625 63349;63350 63349 YLATCADDR 9 0 1 Unmodified _YLATCADDR_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;A0A0S2Z5C1;A0A087WXC6;F8WDI9 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 542.7408 2 542.740031 1083.46551 82900.84 0.72042 0.000391 -0.20548 -0.00011152 0.51494 0.00027948 542.739913233769 547.743885675813 23.884 0.50729 23.884 23.575 24.083 0 67 24 4 0 0 0 0.0019814 1 9712 78.334 32.617 1 0.71722 0.73095 0 9924900 5734000 4190900 40367 582 15216 15626 63351 63351 YLATCADDR 9 0 1 Unmodified _YLATCADDR_ 0 0 0 E9PF19;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3;B4DY50;Q96E41;A0A0S2Z5C1;A0A087WXC6;F8WDI9 E9PF19 E9PF19 TBL2 Transducin beta-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 547.7451 2 542.740031 1083.46551 82619.2 0.42218 0.00022913 0.03334 1.8095E-05 0.45552 0.00024723 542.739903485774 547.744640626908 26.276 0.41304 26.276 26.069 26.483 0 67 17 6 0 0 0 0.019545 1 9833 51.066 17.516 1 0.76688 0.66424 0 1975100 1015600 959450 40368 582 15216 15626 63352 63352 YLCAGAVDFYNNLENFNVDK 20 1 0 Unmodified _YLCAGAVDFYNNLENFNVDK_ 0 0 0 P13807;Q53ER0;B7Z806;B7Z6I6;B7Z8P0 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1183.5399 2 1183.54152 2365.0685 NaN NaN NaN -0.80984 -0.00095848 NaN NaN NaN NaN 118.34 0.32422 118.34 118.2 118.52 0 0 0 0 0.027496 1 77785 43.382 41.083 1 NaN NaN 0 5915600 5915600 0 40369 1479 15217 15627 63353 63353 YLCAGAVDFYNNLENFNVDK 20 1 0 Unmodified _YLCAGAVDFYNNLENFNVDK_ 0 0 0 P13807;Q53ER0;B7Z806;B7Z6I6;B7Z8P0 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1184.0427 2 1183.54152 2365.0685 54959.76 -0.011031 -1.3056E-05 0.16909 0.00020012 0.15806 0.00018707 1184.04348427839 1187.54915325791 130.97 0.50581 130.97 130.75 131.26 0 135 21 11 0 0 0 9.1221E-05 1 79361 44.44 44.44 1 0.48466 0.37754 0 15688000 10498000 5190000 40370 1479 15217 15627 63354 63354 YLCAGAVDFYNNLENFNVDK 20 1 0 Unmodified _YLCAGAVDFYNNLENFNVDK_ 0 0 0 P13807;Q53ER0;B7Z806;B7Z6I6;B7Z8P0 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1184.0438 2 1183.54152 2365.0685 56077.14 0.49981 0.00059155 -0.30423 -0.00036007 0.19558 0.00023147 1184.0426502659 1188.05008704333 130.75 0.56583 130.75 130.55 131.11 0 153 24 9 0 0 0 0.0051638 2 78320 28.546 28.546 1 0.53799 0.43223 0 17265000 10717000 6548400 40371 1479 15217 15627 63355;63356 63355 YLCECQFDDNLK 12 1 0 Unmodified _YLCECQFDDNLK_ 0 0 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 803.3414 2 802.839616 1603.66468 70317.8 0.91954 0.00073824 0.095147 7.6388E-05 1.0147 0.00081463 802.839113377177 806.846467005433 70.475 0.50908 70.475 70.167 70.676 7.6294E-06 97 43 5 0 0 0 0.00054854 3 41008 69.349 68.576 1 0.48082 0.47706 0 8174700 5220700 2954000 40372 1991 15218 15628 63357;63358;63359 63359 YLCECQFDDNLK 12 1 0 Unmodified _YLCECQFDDNLK_ 0 0 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 806.8476 2 802.839616 1603.66468 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.341 1 69.341 68.841 69.841 0 0 0 0 0.0017288 1 41275 69.275 65.421 1 40373 1991 15218 15628 63360 63360 YLCECQFDDNLK 12 1 0 Unmodified _YLCECQFDDNLK_ 0 0 0 Q96T23;H0YER1;Q05DG0;H7C306 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 806.8488 2 802.839616 1603.66468 69365.95 0.62222 0.00049954 0.071872 5.7702E-05 0.69409 0.00055724 803.340996803847 807.348372285845 80.98 0.56654 80.98 80.757 81.323 0 134 37 5 0 0 0 0.061068 1 42954 30.824 29.919 1 0.89641 0.70463 0 2270500 1240800 1029800 40374 1991 15218 15628 63361 63361 YLCLLASDAEVPEPCLPR 18 0 1 Unmodified _YLCLLASDAEVPEPCLPR_ 0 0 0 Q59E91;Q4G0F4;O00411;B4DZE5 Q59E91 Q59E91 POLRMT DNA-directed RNA polymerase;DNA-directed RNA polymerase, mitochondrial MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1057.5216 2 1052.0161 2102.01765 62470.79 0.36105 0.00037983 0.34337 0.00036123 0.70442 0.00074106 1052.51804267881 1057.52176423881 129.31 0.18062 129.31 129.18 129.36 0 23 8 6 0 0 0 0.052358 1 78225 21.55 21.55 1 2.1898 1.936 0 1147700 453870 693860 40375 1363 15219 15629 63362 63362 YLDEDTIYHLQPSGR 15 0 1 Unmodified _YLDEDTIYHLQPSGR_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 606.2968 3 602.960086 1805.85843 77791.93 0.50601 0.0003051 0.48034 0.00028963 0.98635 0.00059473 602.959912229533 606.630450733187 77.919 0.92252 77.919 77.424 78.346 0 301 72 7 0 0 0 6.9745E-05 2 46027 73.983 73.983 1 1.8364 1.9385 0 40340000 13217000 27123000 40376 606 15220 15630 63363;63364 63364 YLDEDTIYHLQPSGR 15 0 1 Unmodified _YLDEDTIYHLQPSGR_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 606.2961 3 602.960086 1805.85843 77605.78 0.37966 0.00022892 1.0518 0.00063416 1.4314 0.00086308 603.294180039866 606.297005637479 76.794 1.0497 76.794 76.359 77.409 -7.6294E-06 357 82 8 0 0 0 6.7813E-05 1 46377 64.244 57.516 1 1.8067 2.0948 0 58110000 21514000 36596000 40377 606 15220 15630 63365 63365 YLDEDTIYHLQPSGR 15 0 1 Unmodified _YLDEDTIYHLQPSGR_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 602.9604 3 602.960086 1805.85843 78779.17 0.80758 0.00048694 0.099048 5.9722E-05 0.90663 0.00054666 602.960039039419 606.296120589842 88.74 0.6301 88.74 88.474 89.104 0 254 41 8 0 0 0 0.0090267 1 48990 27.643 27.643 1 1.3489 1.1575 0 8349200 3323600 5025600 40378 606 15220 15630 63366 63366 YLDEDTIYHLQPSGR 15 0 1 Unmodified _YLDEDTIYHLQPSGR_ 0 0 0 A0A140VJP5;P31153;B4DEX8 A0A140VJP5 A0A140VJP5 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 603.2952 3 602.960086 1805.85843 77569.18 0.39766 0.00023977 1.2655 0.00076305 1.6632 0.0010028 603.295010295829 606.297625716628 88.697 1.0577 88.697 88.038 89.096 0 245 62 8 0 0 0 0.0090267 1 48101 27.643 27.643 1 1.3586 1.132 0 6336100 1996400 4339800 40379 606 15220 15630 63367 63367 YLDFSSIITEVR 12 0 1 Unmodified _YLDFSSIITEVR_ 0 0 0 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4;B4DQ49 CON__Q8N1N4-2 CON__Q8N1N4-2 KRT78 Keratin, type II cytoskeletal 78 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 721.8812 2 721.879924 1441.7453 NaN NaN NaN -0.065934 -4.7596E-05 NaN NaN NaN NaN 123.29 0.43248 123.29 123.15 123.58 0 0 0 0 0.00041768 1 79943 89.171 69.9 1 NaN NaN 0 2248700 2248700 0 + 40380 1178 15221 15631 63368 63368 YLDFSSIITEVR 12 0 1 Unmodified _YLDFSSIITEVR_ 0 0 0 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4;B4DQ49 CON__Q8N1N4-2 CON__Q8N1N4-2 KRT78 Keratin, type II cytoskeletal 78 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 721.8805 2 721.879924 1441.7453 NaN NaN NaN -0.34762 -0.00025094 NaN NaN NaN NaN 122.93 0.43099 122.93 122.69 123.12 0 0 0 0 0.0069371 1 81464 59.426 43.764 1 NaN NaN 0 4311600 4311600 0 + 40381 1178 15221 15631 63369 63369 YLDLILNDFVR 11 0 1 Unmodified _YLDLILNDFVR_ 0 0 0 Q15046;J3KRL2;H3BPV7;Q6ZTI3 Q15046 Q15046 KARS Lysine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.8844 2 690.879727 1379.7449 74954.73 0.89605 0.00061906 -0.32086 -0.00022168 0.57519 0.00039739 690.879462467782 695.883859293944 127.5 0.54682 127.5 127.31 127.85 0 139 35 6 0 0 0 7.4243E-05 1 83095 98.249 98.249 1 1.5957 1.655 0 5721900 2258700 3463300 40382 1749 15222 15632 63370 63370 YLDLILNDFVR 11 0 1 Unmodified _YLDLILNDFVR_ 0 0 0 Q15046;J3KRL2;H3BPV7;Q6ZTI3 Q15046 Q15046 KARS Lysine--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 695.8841 2 690.879727 1379.7449 75067.39 0.92117 0.00063642 0.026844 1.8546E-05 0.94801 0.00065496 690.879681146405 695.884062485395 127.08 0.63481 127.08 126.82 127.45 0 148 39 6 0 0 0 0.00011828 1 84831 96.342 96.342 1 1.885 1.874 0 7251000 2775000 4476000 40383 1749 15222 15632 63371 63371 YLDSIPPGQYMDSSLVK 17 1 0 Oxidation (M) _YLDSIPPGQYM(ox)DSSLVK_ YLDSIPPGQYM(1)DSSLVK YLDSIPPGQYM(45.66)DSSLVK 0 1 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 969.4787 2 964.969142 1927.92373 NaN NaN NaN -0.01699 -1.6394E-05 NaN NaN NaN NaN 90.527 0.80795 90.527 90.023 90.831 0 0 0 0 0.0025797 1 54765 45.661 33.03 1 NaN NaN 0 9883800 0 9883800 40384 25 15223 15633 63372 63372 14 YLDSIPPGQYMDSSLVK 17 1 0 Oxidation (M) _YLDSIPPGQYM(ox)DSSLVK_ YLDSIPPGQYM(1)DSSLVK YLDSIPPGQYM(45.65)DSSLVK 0 1 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 968.9766 2 964.969142 1927.92373 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.84 1 89.84 89.34 90.34 0 0 0 0 0.0039993 1 54239 45.653 32.453 1 40385 25 15223 15633 63373 63373 14 YLDSIPPGQYMDSSLVK 17 1 0 Oxidation (M) _YLDSIPPGQYM(ox)DSSLVK_ YLDSIPPGQYM(1)DSSLVK YLDSIPPGQYM(57.17)DSSLVK 0 1 0 A0A024QZP7;P06493;Q5H9N4;A0A087WZZ9;I6L9I5;A0A024QZJ8;E5RIU6;B7Z3D6 A0A024QZP7 A0A024QZP7 CDC2;CDK1;DKFZp686L20222 Cyclin-dependent kinase 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 968.9751 2 964.969142 1927.92373 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.209 1 89.209 88.709 89.709 0 0 0 0 0.00032785 1 55055 57.175 33.949 1 40386 25 15223 15633 63374 63374 14 YLDWAYR 7 0 1 Unmodified _YLDWAYR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 498.7448 2 493.74016 985.465767 87926.71 0.36566 0.00018054 -0.0016035 -7.9169E-07 0.36406 0.00017975 493.73997631942 498.744353995197 75.768 0.80325 75.768 75.485 76.288 0 210 67 5 0 0 0 0.027742 1 44535 73.039 73.039 1 0.86392 0.86996 0 17474000 9617900 7855600 40387 925 15224 15634 63375 63375 YLDWAYR 7 0 1 Unmodified _YLDWAYR_ 0 0 0 B3KQ21;Q9NYH9;B3KX32;Q9P1J8 B3KQ21 B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 498.7444 2 493.74016 985.465767 88724.17 0.28987 0.00014312 0.16848 8.3187E-05 0.45835 0.00022631 493.740050949297 498.744352195361 74.588 0.59721 74.588 74.291 74.888 -7.6294E-06 187 52 6 0 0 0 0.037563 1 44849 60.788 60.788 1 0.8724 0.95156 0 29672000 10800000 18871000 40388 925 15224 15634 63376 63376 YLEEIATQMR 10 0 1 Oxidation (M) _YLEEIATQM(ox)R_ YLEEIATQM(1)R YLEEIATQM(56.56)R 0 1 0 Q01813;Q8WTZ9;O14943;H0Y3Y3 Q01813 Q01813 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 635.3107 2 635.31082 1268.60709 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.386 1 50.386 49.886 50.886 0 0 0 0 0.0056941 1 28446 56.563 36.776 1 40389 1677 15225 15635 63377 63377 1479 YLEGTGSVAGVVLLPEGHK 19 1 0 Unmodified _YLEGTGSVAGVVLLPEGHK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 643.0172 3 642.682552 1925.02583 76009.27 0.84135 0.00054072 -0.083316 -5.3546E-05 0.75803 0.00048717 642.68167776869 645.68827430415 97.764 0.69363 97.764 97.447 98.14 0 138 56 5 0 0 0 0.034276 1 59719 16.228 16.228 1 2.4635 2.4283 0 19489000 5831100 13658000 40390 397;1622 15226 15636 63378 63378 YLEGTGSVAGVVLLPEGHK 19 1 0 Unmodified _YLEGTGSVAGVVLLPEGHK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 645.6894 3 642.682552 1925.02583 78208.72 0.76487 0.00049157 0.66832 0.00042952 1.4332 0.00092108 643.017794617167 645.354448131613 110.18 0.27172 110.18 110.05 110.32 7.6294E-06 52 15 5 0 0 0 0.053733 1 63629 11.249 11.249 1 2.4011 2.0003 0 1766600 425740 1340800 40391 397;1622 15226 15636 63379 63379 YLEGTSCIAGVLVPAK 16 1 0 Unmodified _YLEGTSCIAGVLVPAK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 843.4552 2 839.447648 1676.88074 NaN NaN NaN -0.18442 -0.00015481 NaN NaN NaN NaN 105.6 0.61674 105.6 105.32 105.94 0 0 0 0 1.8454E-08 1 65468 94.616 88.233 1 NaN NaN 0 19117000 0 19117000 40392 397;1622 15227 15637 63380 63380 YLEGTSCIAGVLVPAK 16 1 0 Unmodified _YLEGTSCIAGVLVPAK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 843.4554 2 839.447648 1676.88074 67595.7 0.83829 0.0007037 -0.21281 -0.00017864 0.62548 0.00052506 839.447484747752 843.45497003407 104.96 0.68443 104.96 104.61 105.29 0 318 54 9 0 0 0 1.7673E-07 3 66551 124.42 124.42 1 2.2899 2.468 0 37984000 11643000 26341000 40393 397;1622 15227 15637 63381;63382;63383 63383 YLEGTSCIAGVLVPAK 16 1 0 Unmodified _YLEGTSCIAGVLVPAK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 843.9565 2 839.447648 1676.88074 69093.02 0.41195 0.00034581 0.25578 0.00021471 0.66772 0.00056052 839.448182387901 843.455808727744 117.11 0.509 117.11 116.9 117.41 -7.6294E-06 93 22 7 0 0 0 0.0018789 2 68884 58.132 58.132 1 1.8808 1.4886 0 4175300 1456400 2718900 40394 397;1622 15227 15637 63384;63385 63384 YLEGTSCIAGVLVPAK 16 1 0 Unmodified _YLEGTSCIAGVLVPAK_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 839.449 2 839.447648 1676.88074 68744 0.66992 0.00056237 0.31761 0.00026662 0.98753 0.00082898 839.447762003445 843.455497873064 116.88 0.52103 116.88 116.7 117.22 -7.6294E-06 112 23 8 0 0 0 0.0029602 2 67902 58.511 58.511 1 2.1356 1.6872 0 3929300 1356200 2573200 40395 397;1622 15227 15637 63386;63387 63387 YLELLGYR 8 0 1 Unmodified _YLELLGYR_ 0 0 0 H7BXG7;A0A1S5UZ19;A0A024RDH6;A0A024RDD3;D6REX3;O94979;H0Y9K1;H0Y8V7;H0YAB3;D6RHZ5 H7BXG7 H7BXG7 SEC31A;SEC31L1 Protein transport protein Sec31A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 518.7897 2 513.784567 1025.55458 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.952 1 94.952 94.452 95.452 0 0 0 0 0.0066879 1 57701 81.297 47.558 1 40396 384 15228 15638 63388 63388 YLELLGYR 8 0 1 Unmodified _YLELLGYR_ 0 0 0 H7BXG7;A0A1S5UZ19;A0A024RDH6;A0A024RDD3;D6REX3;O94979;H0Y9K1;H0Y8V7;H0YAB3;D6RHZ5 H7BXG7 H7BXG7 SEC31A;SEC31L1 Protein transport protein Sec31A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 518.7887 2 513.784567 1025.55458 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.783 1 93.783 93.283 94.283 0 0 0 0 0.0094332 1 58232 77.674 38.132 1 40397 384 15228 15638 63389 63389 YLENQTFR 8 0 1 Unmodified _YLENQTFR_ 0 0 0 B0AZS5;O00139;B4DM85;D6R9M0 B0AZS5 B0AZS5 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 535.7668 2 535.766906 1069.51926 83654.45 0.51852 0.00027781 -0.30874 -0.00016541 0.20978 0.00011239 535.766684254417 540.770929698505 40.248 0.41496 40.248 40.013 40.428 0 98 34 3 0 0 0 0.014638 1 21023 62.546 25.526 1 0.82693 0.86375 0 38738000 21496000 17242000 40398 804 15229 15639 63390 63390 YLFIFSVANMR 11 0 1 Oxidation (M) _YLFIFSVANM(ox)R_ YLFIFSVANM(1)R YLFIFSVANM(78.15)R 0 1 0 A0A024RAE1;Q9UKD2;B4DHZ2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 693.86 2 688.855198 1375.69584 73452.02 0.73904 0.00050909 0.11811 8.1363E-05 0.85715 0.00059045 688.855665475449 693.859311368802 117.37 0.67791 117.37 117.1 117.78 0 202 48 6 0 0 0 0.00021433 2 75052 78.149 68.735 1 1.7386 1.7613 0 15196000 5495200 9701200 40399 302 15230 15640 63391;63392 63391 217 YLFIFSVANMR 11 0 1 Oxidation (M) _YLFIFSVANM(ox)R_ YLFIFSVANM(1)R YLFIFSVANM(87.64)R 0 1 0 A0A024RAE1;Q9UKD2;B4DHZ2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 693.8593 2 688.855198 1375.69584 73718.63 0.64604 0.00044503 0.16817 0.00011584 0.8142 0.00056087 688.855671363667 693.859369162412 116.76 0.70811 116.76 116.47 117.18 0 193 43 7 0 0 0 0.00015467 2 76386 87.639 69.82 1 1.6368 1.6396 0 18614000 6930000 11684000 40400 302 15230 15640 63393;63394 63393 217 YLFIFSVANMR 11 0 1 Oxidation (M) _YLFIFSVANM(ox)R_ YLFIFSVANM(1)R YLFIFSVANM(55.57)R 0 1 0 A0A024RAE1;Q9UKD2;B4DHZ2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.856 2 688.855198 1375.69584 NaN NaN NaN -0.25185 -0.00017349 NaN NaN NaN NaN 128.94 0.62714 128.94 128.67 129.3 0 0 0 0 0.0039911 1 77909 55.567 37.703 1 NaN NaN 0 2015900 2015900 0 40401 302 15230 15640 63395 63395 217 YLFIFSVANMR 11 0 1 Oxidation (M) _YLFIFSVANM(ox)R_ YLFIFSVANM(1)R YLFIFSVANM(57.6)R 0 1 0 A0A024RAE1;Q9UKD2;B4DHZ2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 689.3553 2 688.855198 1375.69584 73815.91 0.82087 0.00056546 0.10288 7.0871E-05 0.92375 0.00063633 688.855321971335 693.85952312839 128.7 0.58171 128.7 128.42 129 0 119 22 7 0 0 0 0.0022624 2 76781 57.598 57.598 1 0.52152 0.44958 0 3395200 2362900 1032300 40402 302 15230 15640 63396;63397 63396 217 YLFLGDYVDR 10 0 1 Unmodified _YLFLGDYVDR_ 0 0 0 E9PPC8;E9PK68;H0YB02;G3V111;B7Z781;E7ETC2;Q5F2F8;A0A0S2Z4B5;A0A0S2Z4C6;P48454;Q08209;P16298 E9PPC8 E9PPC8 PPP3CA;PPP3CC;PPP3CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.8201 2 630.816596 1259.61864 79287.52 0.65734 0.00041466 -0.41716 -0.00026315 0.24018 0.00015151 630.816336332077 635.820400986007 105.86 0.72981 105.86 105.49 106.22 0 184 54 5 0 0 0 0.0048352 1 65822 60.973 53.85 1 1.246 1.3075 0 12013000 5713100 6300400 40403 561 15231 15641 63398 63398 YLFLGDYVDR 10 0 1 Unmodified _YLFLGDYVDR_ 0 0 0 E9PPC8;E9PK68;H0YB02;G3V111;B7Z781;E7ETC2;Q5F2F8;A0A0S2Z4B5;A0A0S2Z4C6;P48454;Q08209;P16298 E9PPC8 E9PPC8 PPP3CA;PPP3CC;PPP3CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 635.8214 2 630.816596 1259.61864 NaN NaN NaN 0.57779 0.00036448 NaN NaN NaN NaN 116.9 0.43709 116.9 116.69 117.13 0 0 0 0 0.0093157 1 68760 64.04 55.177 1 NaN NaN 0 2494500 0 2494500 40404 561 15231 15641 63399 63399 YLFLGDYVDR 10 0 1 Unmodified _YLFLGDYVDR_ 0 0 0 E9PPC8;E9PK68;H0YB02;G3V111;B7Z781;E7ETC2;Q5F2F8;A0A0S2Z4B5;A0A0S2Z4C6;P48454;Q08209;P16298 E9PPC8 E9PPC8 PPP3CA;PPP3CC;PPP3CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 635.821 2 630.816596 1259.61864 NaN NaN NaN 0.17732 0.00011186 NaN NaN NaN NaN 116.77 0.51327 116.77 116.48 116.99 0 0 0 0 0.01685 1 67722 56.258 47.395 1 NaN NaN 0 2002600 0 2002600 40405 561 15231 15641 63400 63400 YLFLNAIANQLR 12 0 1 Unmodified _YLFLNAIANQLR_ 0 0 0 A5YKK6;B3KS60;B7Z6X2;B3KPW6;B4DYL7 A5YKK6 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 718.4079 2 718.406444 1434.79833 76949.34 1.0156 0.00072958 -0.43977 -0.00031593 0.57579 0.00041365 718.406018962337 723.409884262521 121.51 0.30579 121.51 121.38 121.69 0 40 19 4 0 0 0 0.0017142 1 78557 60.436 51.904 1 2.5124 2.7092 0 2832900 874440 1958400 40406 676 15232 15642 63401 63401 YLFLNAIANQLR 12 0 1 Unmodified _YLFLNAIANQLR_ 0 0 0 A5YKK6;B3KS60;B7Z6X2;B3KPW6;B4DYL7 A5YKK6 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 723.7095 2 718.406444 1434.79833 NaN NaN NaN -1.1911 -0.00085569 NaN NaN NaN NaN 134.03 0.24672 134.03 133.84 134.08 0 0 0 0 0.031812 1 81700 46.891 37.204 1 NaN NaN 0 284540 0 284540 40407 676 15232 15642 63402 63402 YLFPVPK 7 1 0 Unmodified _YLFPVPK_ 0 0 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.2628 2 432.254914 862.495276 92224.77 0.17601 7.6083E-05 0.60612 0.000262 0.78213 0.00033808 432.255029601123 436.2620683485 86.947 0.30955 86.947 86.821 87.13 0 103 21 7 0 0 0 0.03153 1 52420 66.994 47.147 1 0.89166 1.0084 0 103670000 48865000 54804000 40408 1286 15233 15643 63403 63403 YLFPVPK 7 1 0 Unmodified _YLFPVPK_ 0 0 0 H0Y714;Q96G21;B8ZZ47;E7ENR5;B9A008 H0Y714 H0Y714 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.2624 2 432.254914 862.495276 92316.43 0.3136 0.00013555 0.40412 0.00017468 0.71771 0.00031024 432.254956999735 436.262043875571 85.836 0.32415 85.836 85.664 85.988 0 118 22 7 0 0 0 0.03153 2 52840 66.994 43.957 1 0.90161 1.0478 0 232130000 126300000 105830000 40409 1286 15233 15643 63404;63405 63405 YLGEGPR 7 0 1 Unmodified _YLGEGPR_ 0 0 0 A8K2M0;P43686 A8K2M0 A8K2M0 PSMC4 26S protease regulatory subunit 6B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 396.2059 2 396.205953 790.397353 96905.59 -0.20929 -8.2923E-05 0.50198 0.00019889 0.29268 0.00011596 396.206173269711 401.21014566055 23.575 0.41795 23.575 23.395 23.813 0 54 19 4 0 0 0 0.034211 1 9481 62.714 26.127 1 2.3489 2.4029 0 14551000 3836100 10715000 40410 710 15234 15644 63406 63406 YLGFGTPSNLGK 12 1 0 Unmodified _YLGFGTPSNLGK_ 0 0 0 Q9H072;A0A024R5X7;O76031 Q9H072 Q9H072 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 627.3314 2 627.32987 1252.64519 NaN NaN NaN 1.5702 0.00098505 NaN NaN NaN NaN 82.994 0.23632 82.994 82.816 83.053 0 0 0 0 0.044909 1 49673 42.395 23.301 1 NaN NaN 0 3783800 3783800 0 40411 191 15235 15645 63407 63407 YLGFGTPSNLGK 12 1 0 Unmodified _YLGFGTPSNLGK_ 0 0 0 Q9H072;A0A024R5X7;O76031 Q9H072 Q9H072 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 631.3368 2 627.32987 1252.64519 77435.43 0.77318 0.00048504 0.10784 6.7653E-05 0.88102 0.00055269 627.330399658021 631.336799538107 81.901 0.39505 81.901 81.746 82.141 0 111 34 4 0 0 0 0.0009625 2 50016 63.216 63.216 1 1.8585 1.9533 0 19669000 5445600 14223000 40412 191 15235 15645 63408;63409 63408 YLGGSMDLSTFDFR 14 0 1 Oxidation (M) _YLGGSM(ox)DLSTFDFR_ YLGGSM(1)DLSTFDFR YLGGSM(46.84)DLSTFDFR 0 1 0 O95983 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.3707 2 812.869231 1623.72391 71378.75 0.48181 0.00039165 -0.50999 -0.00041456 -0.028179 -2.2906E-05 812.868900401658 817.87318791093 102.52 0.65866 102.52 102.19 102.85 7.6294E-06 223 55 6 0 0 0 0.0017523 1 63129 46.844 46.844 1 1.0287 1.0745 0 10630000 4534800 6094900 40413 1432 15236 15646 63410 63410 1123 YLGGSMDLSTFDFR 14 0 1 Oxidation (M) _YLGGSM(ox)DLSTFDFR_ YLGGSM(1)DLSTFDFR YLGGSM(65.5)DLSTFDFR 0 1 0 O95983 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.3902 2 812.869231 1623.72391 70721.77 0.4148 0.00033718 -0.42492 -0.0003454 -0.010115 -8.2224E-06 813.370134481135 817.873240552499 101.94 0.63925 101.94 101.59 102.23 0 187 48 6 0 0 0 0.00094058 1 64172 65.5 65.5 1 1.0031 0.9918 0 15211000 7268500 7942800 40414 1432 15236 15646 63411 63411 1123 YLGLLENLR 9 0 1 Unmodified _YLGLLENLR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 550.8212 2 545.816399 1089.61824 82693.95 0.78028 0.00042589 -0.021894 -1.195E-05 0.75838 0.00041394 545.816250992915 550.820451516255 104.52 0.99446 104.52 104.12 105.12 0 334 81 6 0 0 0 0.0028653 1 64446 73.248 23.122 1 1.1399 1.1867 0 21847000 9835400 12012000 40415 1088;1189 15237 15647 63412 63412 YLGLLENLR 9 0 1 Unmodified _YLGLLENLR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 550.8207 2 545.816399 1089.61824 81860.95 0.15656 8.5455E-05 0.38363 0.00020939 0.5402 0.00029485 545.816452788847 550.820707378262 103.62 0.93098 103.62 103.24 104.17 0 296 79 5 0 0 0 0.0017345 3 65455 81.548 28.381 1 1.1771 1.254 0 24447000 10516000 13931000 40416 1088;1189 15237 15647 63413;63414;63415 63415 YLGLLENLR 9 0 1 Unmodified _YLGLLENLR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 550.8208 2 545.816399 1089.61824 83945.88 0.56502 0.0003084 0.028967 1.5811E-05 0.59399 0.00032421 545.8163284257 550.820453517086 116.19 0.66476 116.19 116 116.66 7.6294E-06 100 28 6 0 0 0 0.0060214 1 68229 65.246 11.041 1 1.6356 1.369 0 3929900 1690300 2239700 40417 1088;1189 15237 15647 63416 63416 YLGLLENLR 9 0 1 Unmodified _YLGLLENLR_ 0 0 0 F5H6E2;B7Z3E5;O00159;B7Z9C0;A1L180;D3DTH7 F5H6E2;D3DTH7 F5H6E2 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 545.8163 2 545.816399 1089.61824 83334.68 0.83144 0.00045381 0.030326 1.6553E-05 0.86176 0.00047036 545.816372549589 550.820507092972 116.05 0.57647 116.05 115.74 116.32 0 97 28 5 0 0 0 0.0069772 2 67161 70.919 27.673 1 1.6591 1.3765 0 5474000 2822800 2651200 40418 1088;1189 15237 15647 63417;63418 63418 YLGLLENVR 9 0 1 Unmodified _YLGLLENVR_ 0 0 0 E9PDF6;B0I1S9;O43795 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 544.312 2 538.808574 1075.60259 80927.24 0.8944 0.00048191 -1.4737 -0.00079403 -0.57927 -0.00031212 539.309590793385 543.811563754764 91.503 0.58961 91.503 91.179 91.768 -7.6294E-06 102 39 4 0 0 0 0.0060214 1 55368 65.246 38.116 1 1.8266 1.8557 0 18314000 5248000 13066000 40419 805 15238 15648 63419 63419 YLGNTVDLSSFDFR 14 0 1 Unmodified _YLGNTVDLSSFDFR_ 0 0 0 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 822.401 2 817.39647 1632.77839 66823.28 0.76399 0.00062449 -0.14312 -0.00011698 0.62088 0.0005075 817.897528366866 822.400651711881 113.15 0.80542 113.15 112.71 113.52 0 262 54 9 0 0 0 1.9079E-06 3 73323 107.06 98.326 1 0.68947 0.76468 0 42711000 25863000 16848000 40420 2096 15239 15649 63420;63421;63422 63422 YLGNTVDLSSFDFR 14 0 1 Unmodified _YLGNTVDLSSFDFR_ 0 0 0 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 817.898 2 817.39647 1632.77839 67671.55 0.86034 0.00070324 -0.18168 -0.0001485 0.67867 0.00055474 817.39584026202 822.400690761985 124.77 0.95689 124.77 124.26 125.22 0 212 42 11 0 0 0 6.6215E-05 2 74770 90.614 87.189 1 1.6607 1.3548 0 14767000 4961200 9805800 40421 2096 15239 15649 63423;63424 63424 YLGNTVDLSSFDFR 14 0 1 Unmodified _YLGNTVDLSSFDFR_ 0 0 0 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 817.8982 2 817.39647 1632.77839 66790.13 0.86762 0.00070919 -0.43628 -0.00035661 0.43134 0.00035258 817.395704369786 822.400509356495 124.68 0.80187 124.68 124.33 125.13 7.6294E-06 194 37 10 0 0 0 7.3204E-05 2 73773 89.548 89.283 1 1.5253 1.2697 0 15661000 6528400 9132300 40422 2096 15239 15649 63425;63426 63426 YLGPACDLTLFDFK 14 1 0 Unmodified _YLGPACDLTLFDFK_ 0 0 0 A0A0A0MS90;A8K654;B4DI41;Q9UIS9;B4DUR3 A0A0A0MS90 A0A0A0MS90 MBD1 Methyl-CpG-binding domain protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 834.4151 2 830.407992 1658.80143 67641.7 0.93655 0.00077772 0.16384 0.00013606 1.1004 0.00091377 830.407483689271 834.414961728513 124.75 0.41628 124.75 124.54 124.96 0 132 29 6 0 0 0 7.4152E-05 2 81045 89.403 89.403 1 0.7295 0.73684 0 6958100 3701000 3257100 40423 477 15240 15650 63427;63428 63428 YLGPACDLTLFDFK 14 1 0 Unmodified _YLGPACDLTLFDFK_ 0 0 0 A0A0A0MS90;A8K654;B4DI41;Q9UIS9;B4DUR3 A0A0A0MS90 A0A0A0MS90 MBD1 Methyl-CpG-binding domain protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 834.9162 2 830.407992 1658.80143 67102.64 1.0736 0.00089155 -0.66489 -0.00055213 0.40875 0.00033943 830.407382823277 834.41413222042 124.32 0.44394 124.32 124.11 124.55 -7.6294E-06 124 27 7 0 0 0 0.00012516 2 82674 80.979 80.979 1 0.74968 0.75521 0 7279100 4071300 3207800 40424 477 15240 15650 63429;63430 63430 YLGYLEQLLR 10 0 1 Unmodified _YLGYLEQLLR_ 0 0 0 CON__P02662 CON__P02662 CON__P02662 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.3565 2 634.355888 1266.69722 NaN NaN NaN 0.23567 0.0001495 NaN NaN NaN NaN 120.39 0.8222 120.39 120.07 120.9 0 0 0 0 0.0034089 1 77574 76.679 44.458 1 NaN NaN 0 14315000 14315000 0 + 40425 1151 15241 15651 63431 63431 YLGYLEQLLR 10 0 1 Unmodified _YLGYLEQLLR_ 0 0 0 CON__P02662 CON__P02662 CON__P02662 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3564 2 634.355888 1266.69722 NaN NaN NaN -0.08633 -5.4764E-05 NaN NaN NaN NaN 119.75 0.74955 119.75 119.49 120.24 -7.6294E-06 0 0 0 0.0050498 1 78989 70.256 38.035 1 NaN NaN 0 18516000 18516000 0 + 40426 1151 15241 15651 63432 63432 YLHENLPIPQR 11 0 1 Unmodified _YLHENLPIPQR_ 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 463.9215 3 460.585854 1378.73573 NaN NaN NaN -0.15826 -7.2892E-05 NaN NaN NaN NaN 64.286 0.62374 64.286 63.928 64.552 0 0 0 0 0.027686 1 36894 38.478 30.373 1 NaN NaN 0 17490000 0 17490000 40427 1611 15242 15652 63433 63433 YLHNFQGK 8 1 0 Unmodified _YLHNFQGK_ 0 0 0 O95251;E7EUP3;B7Z4D9;B3KVJ2;B4DJ40;B4DG18;B4DGH8 O95251 O95251 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.7657 2 503.758884 1005.50321 86572.97 0.22384 0.00011276 1.1605 0.00058462 1.3843 0.00069738 503.759266063437 507.765780616095 21.773 0.34552 21.773 21.626 21.971 1.9073E-06 65 21 7 0 0 0 0.022631 2 7998 64.757 64.757 1 0.70256 0.74552 0 15770000 10063000 5706900 40428 1422 15243 15653 63434;63435 63435 YLIANATNPESK 12 1 0 Unmodified _YLIANATNPESK_ 0 0 0 P27348;Q53S41;B4DMT8;E9PG15 P27348 P27348 YWHAQ 14-3-3 protein theta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.8521 2 660.843342 1319.67213 74114.84 0.5049 0.00033366 0.10475 6.9221E-05 0.60965 0.00040288 660.843476873058 664.850827822242 58.836 0.43676 58.836 58.608 59.045 3.8147E-06 98 35 4 0 0 0 0.017556 1 29287 41.399 22.129 1 1.1197 0.88779 0 2005100 870500 1134600 40429 1523 15244 15654 63436 63436 YLIATSEQPIAALHR 15 0 1 Unmodified _YLIATSEQPIAALHR_ 0 0 0 Q0VGA5;Q53HA4;Q5T5C7;P49591 Q0VGA5 Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 565.3167 3 561.645661 1681.91515 NaN NaN NaN -0.25633 -0.00014396 NaN NaN NaN NaN 84.13 0.39323 84.13 83.963 84.357 0 0 0 0 0.0022206 1 50403 53.377 40.995 1 NaN NaN 0 8623700 0 8623700 40430 1584 15245 15655 63437 63437 YLIATSEQPIAALHR 15 0 1 Unmodified _YLIATSEQPIAALHR_ 0 0 0 Q0VGA5;Q53HA4;Q5T5C7;P49591 Q0VGA5 Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 565.3167 3 561.645661 1681.91515 83357.2 0.5905 0.00033165 0.34662 0.00019468 0.93712 0.00052633 561.646526213578 564.98179589968 82.894 0.45874 82.894 82.699 83.158 7.6294E-06 123 36 5 0 0 0 6.9085E-05 1 50694 55.66 49.253 1 1.4712 1.4837 0 10467000 3585600 6881500 40431 1584 15245 15655 63438 63438 YLIGAAPIAYGLPVSLR 17 0 1 Unmodified _YLIGAAPIAYGLPVSLR_ 0 0 0 Q14674 Q14674 Q14674 ESPL1 Separin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 893.0236 2 887.516722 1773.01889 65902.13 0.85536 0.00075915 0.24607 0.00021839 1.1014 0.00097754 888.01871001615 892.520733327884 127.53 0.238 127.53 127.42 127.66 0 45 16 4 0 0 0 0.00011314 1 83084 58.674 58.674 1 0.81046 0.85924 0 3839300 2374000 1465300 40432 1737 15246 15656 63439 63439 YLIGAAPIAYGLPVSLR 17 0 1 Unmodified _YLIGAAPIAYGLPVSLR_ 0 0 0 Q14674 Q14674 Q14674 ESPL1 Separin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.5229 2 887.516722 1773.01889 67475.09 0.7404 0.00065712 0.70964 0.00062982 1.45 0.0012869 888.018924104873 892.52104275577 127.17 0.2448 127.17 127.06 127.3 0 49 15 5 0 0 0 0.00019496 1 84885 50.207 50.207 1 0.86887 0.92532 0 3663400 1758700 1904700 40433 1737 15246 15656 63440 63440 YLIGELVSSK 10 1 0 Unmodified _YLIGELVSSK_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.8171 2 554.816064 1107.61758 80848.65 0.46178 0.0002562 -0.0098125 -5.4441E-06 0.45196 0.00025076 554.816141726281 558.823271383025 88.489 0.98273 88.489 87.929 88.912 0 314 76 6 0 0 0 0.0016591 2 53245 72.643 64.423 1 0.91919 1.0366 0 112330000 61200000 51134000 40434 1803 15247 15657 63441;63442 63441 YLIGELVSSK 10 1 0 Unmodified _YLIGELVSSK_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.8233 2 554.816064 1107.61758 NaN NaN NaN 0.01602 8.8882E-06 NaN NaN NaN NaN 87.433 0.66741 87.433 87.019 87.687 0 0 0 0 0.032821 1 53669 51.268 39.674 1 NaN NaN 0 51825000 0 51825000 40435 1803 15247 15657 63443 63443 YLIGELVSSK 10 1 0 Unmodified _YLIGELVSSK_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 554.8183 2 554.816064 1107.61758 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.283 1 87.283 86.783 87.783 0 0 0 0 0.00049973 1 53784 71.614 28.49 1 40436 1803 15247 15657 63444 63444 YLIGELVSSK 10 1 0 Unmodified _YLIGELVSSK_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 554.8165 2 554.816064 1107.61758 81886.41 0.26242 0.00014559 0.26219 0.00014547 0.52461 0.00029106 554.816320571832 558.823337996555 100.91 1.4858 100.91 100.24 101.72 -7.6294E-06 381 107 6 0 0 0 0.011842 2 57122 51.445 45.141 1 1.5097 1.1939 0 10538000 4265800 6272500 40437 1803 15247 15657 63445;63446 63446 YLIGELVSSK 10 1 0 Unmodified _YLIGELVSSK_ 0 0 0 Q59HG1;O95239;B4DYE2;B3KNC0;Q2VIQ3 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.8163 2 554.816064 1107.61758 81953.87 0.48398 0.00026852 0.043917 2.4366E-05 0.5279 0.00029289 554.816112599484 558.823171385704 100.88 1.2079 100.88 100.15 101.35 0 371 85 6 0 0 0 0.020014 2 56150 46.819 41.617 1 1.5424 1.2751 0 11843000 4526500 7316700 40438 1803 15247 15657 63447;63448 63447 YLINGVNANNTR 12 0 1 Unmodified _YLINGVNANNTR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 679.8564 2 674.852032 1347.68951 73905.58 0.45391 0.00030632 0.21201 0.00014307 0.66592 0.00044939 674.852103552358 679.856102816411 52.369 1.0656 52.369 51.806 52.872 3.8147E-06 421 79 8 0 0 0 1.9047E-12 1 28910 144.77 133.62 1 0.79803 0.9082 0 114420000 62753000 51664000 40439 69 15248 15658 63449 63449 YLINGVNANNTR 12 0 1 Unmodified _YLINGVNANNTR_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 674.8526 2 674.852032 1347.68951 74300.64 0.46135 0.00031134 -0.17794 -0.00012008 0.2834 0.00019126 674.851977002467 679.856192463612 60.088 0.80286 60.088 59.744 60.547 -3.8147E-06 211 56 6 0 0 0 0.00023876 2 30711 86.624 86.624 1 1.8805 1.5805 0 26798000 9795400 17003000 40440 69 15248 15658 63450;63451 63451 YLLEQLK 7 1 0 Unmodified _YLLEQLK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 457.7763 2 453.768386 905.522219 89229.86 -0.29885 -0.00013561 0.50717 0.00023014 0.20832 9.453E-05 453.768507577639 457.775603495956 72.422 0.71349 72.422 72.133 72.847 0 278 52 10 0 0 0 0.027742 1 42297 73.039 8.2624 1 1.6246 1.8326 0 132280000 48675000 83606000 40441 1914 15249 15659 63452 63452 YLLEQLK 7 1 0 Unmodified _YLLEQLK_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 457.7755 2 453.768386 905.522219 88946.73 0.058304 2.6457E-05 0.14717 6.6779E-05 0.20547 9.3236E-05 453.768383928863 457.775512642437 71.125 0.7541 71.125 70.651 71.406 0 244 57 9 0 0 0 0.027742 2 42438 73.039 8.2624 1 1.6869 1.941 0 176050000 74755000 101300000 40442 1914 15249 15659 63453;63454 63453 YLLGDMEGR 9 0 1 Oxidation (M) _YLLGDM(ox)EGR_ YLLGDM(1)EGR YLLGDM(46.13)EGR 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.2568 2 535.252774 1068.491 81543.94 0.79123 0.00042351 0.431 0.00023069 1.2222 0.0006542 535.252854414697 540.256968600377 44.75 1.1008 44.75 44.177 45.278 0 291 98 4 0 0 0 0.014422 1 23874 46.129 19.527 1 1.0103 1.0335 0 32061000 15470000 16591000 40443 1770 15250 15660 63455 63455 1641 YLLGDMEGR 9 0 1 Oxidation (M) _YLLGDM(ox)EGR_ YLLGDM(1)EGR YLLGDM(71.69)EGR 0 1 0 Q16531;B4DSA8;F5GY55;B7Z2A1 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.2569 2 535.252774 1068.491 NaN NaN NaN 0.27258 0.0001459 NaN NaN NaN NaN 44.045 0.84604 44.045 43.553 44.399 0 0 0 0 0.0020968 1 23893 71.692 39.757 1 NaN NaN 0 25780000 0 25780000 40444 1770 15250 15660 63456 63456 1641 YLMEEDEDAYK 11 1 0 Oxidation (M) _YLM(ox)EEDEDAYK_ YLM(1)EEDEDAYK YLM(101.65)EEDEDAYK 0 1 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 715.3004 2 711.29249 1420.57043 71263.77 1.0681 0.00075972 0.14346 0.00010204 1.2115 0.00086176 711.29263627743 715.299801360202 38.241 0.9054 38.241 37.786 38.691 0 458 76 9 0 0 0 1.3757E-05 2 19513 101.65 101.65 1 1.287 1.4534 0 138580000 64168000 74410000 40445 653 15251 15661 63457;63458 63458 511 YLMEEDEDAYK 11 1 0 Oxidation (M) _YLM(ox)EEDEDAYK_ YLM(1)EEDEDAYK YLM(110.76)EEDEDAYK 0 1 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.2926 2 711.29249 1420.57043 72599.3 0.65277 0.00046431 0.32012 0.0002277 0.97289 0.00069201 711.292796286687 715.299880671069 37.313 0.97831 37.313 36.841 37.819 0 551 79 10 0 0 0 2.4365E-06 2 19116 110.76 110.76 1 1.3014 1.4839 0 151880000 66790000 85091000 40446 653 15251 15661 63459;63460 63459 511 YLMEEDEDAYK 11 1 0 Unmodified _YLMEEDEDAYK_ 0 0 0 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.8039 2 703.295033 1404.57551 73251.45 0.84581 0.00059486 -0.35281 -0.00024813 0.493 0.00034672 703.295029103053 707.302005940546 65.611 0.51489 65.611 65.336 65.851 0 138 38 6 0 0 0 0.030651 1 33889 38.567 38.567 1 1.2426 1.0375 0 1688900 778130 910780 40447 653 15251 15662 63461 63461 YLMEEDEDAYKK 12 2 0 Oxidation (M) _YLM(ox)EEDEDAYKK_ YLM(1)EEDEDAYKK YLM(130.98)EEDEDAYKK 0 1 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 775.8453 2 775.339972 1548.66539 67964.47 0.87063 0.00067503 0.31787 0.00024645 1.1885 0.00092149 775.340236066477 783.354532952474 26.065 0.54931 26.065 25.763 26.313 0 197 31 8 0 0 0 2.4307E-12 2 11381 130.98 130.98 1 1.2383 1.4617 0 72384000 31314000 41070000 40448 653 15252 15663 63462;63463 63463 511 YLMEEDEDAYKK 12 2 0 Oxidation (M) _YLM(ox)EEDEDAYKK_ YLM(1)EEDEDAYKK YLM(104.3)EEDEDAYKK 0 1 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 517.5632 3 517.229073 1548.66539 82583.83 0.61279 0.00031696 -0.0098029 -5.0704E-06 0.60299 0.00031188 517.229206473993 522.571891063118 25.948 0.70934 25.948 25.743 26.452 0 273 41 10 0 0 0 6.1879E-06 2 11393 104.3 104.3 1 1.2441 1.4679 0 168140000 76132000 92007000 40449 653 15252 15663 63464;63465 63464 511 YLMEEDEDAYKK 12 2 0 Oxidation (M) _YLM(ox)EEDEDAYKK_ YLM(1)EEDEDAYKK YLM(170.99)EEDEDAYKK 0 1 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 783.3534 2 775.339972 1548.66539 68094.36 0.79526 0.0006166 0.49877 0.00038672 1.294 0.0010033 775.340323400449 783.354624297786 25.714 0.50089 25.714 25.393 25.893 0 172 29 8 0 0 0 3.7691E-29 2 11090 170.99 170.99 1 1.3296 1.5431 0 90946000 42932000 48015000 40450 653 15252 15663 63466;63467 63466 511 YLMEEDEDAYKK 12 2 0 Oxidation (M) _YLM(ox)EEDEDAYKK_ YLM(1)EEDEDAYKK YLM(188.96)EEDEDAYKK 0 1 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 517.231 3 517.229073 1548.66539 82335.05 0.59788 0.00030924 0.23572 0.00012192 0.8336 0.00043116 517.229229408838 522.572027271819 25.555 0.75668 25.555 25.374 26.131 0 240 43 10 0 0 0 2.7257E-48 1 11124 188.96 188.96 1 1.2787 1.4899 0 244770000 100750000 144020000 40451 653 15252 15663 63468 63468 511 YLMEEDEDAYKK 12 2 0 Oxidation (M) _YLM(ox)EEDEDAYKK_ YLM(1)EEDEDAYKK YLM(49.19)EEDEDAYKK 0 1 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 783.3549 2 775.339972 1548.66539 68066.2 0.52697 0.00040858 -0.1493 -0.00011576 0.37767 0.00029282 775.339773869222 783.354211809327 30.011 0.33557 30.011 29.83 30.166 1.9073E-06 139 24 8 0 0 0 0.014981 1 12308 49.189 49.189 1 0.72013 0.61995 0 6138200 3567900 2570300 40452 653 15252 15663 63469 63469 511 YLMEEDEDAYKK 12 2 0 Oxidation (M) _YLM(ox)EEDEDAYKK_ YLM(1)EEDEDAYKK YLM(42.8)EEDEDAYKK 0 1 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 517.2296 3 517.229073 1548.66539 83441.7 0.18365 9.4987E-05 0.10228 5.2905E-05 0.28593 0.00014789 517.563490839654 522.57191792236 29.995 0.35376 29.995 29.782 30.136 1.9073E-06 119 25 6 0 0 0 0.005333 1 12340 42.797 42.797 1 0.82231 0.70178 0 16731000 8328500 8402500 40453 653 15252 15663 63470 63470 511 YLMEEDEDAYKK 12 2 0 Oxidation (M) _YLM(ox)EEDEDAYKK_ YLM(1)EEDEDAYKK YLM(64.83)EEDEDAYKK 0 1 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 522.5718 3 517.229073 1548.66539 83202.36 -0.011029 -5.7045E-06 0.43594 0.00022548 0.42491 0.00021978 517.229274507505 522.572123127949 30.263 0.35284 30.263 30.05 30.403 0 107 22 6 0 0 0 0.00029242 1 12006 64.827 64.827 1 0.69967 0.59192 0 13564000 7350500 6213700 40454 653 15252 15663 63471 63471 511 YLMEEDEDAYKK 12 2 0 Oxidation (M) _YLM(ox)EEDEDAYKK_ YLM(1)EEDEDAYKK YLM(56.36)EEDEDAYKK 0 1 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 783.3546 2 775.339972 1548.66539 69019.65 0.32462 0.00025169 0.19533 0.00015145 0.51995 0.00040314 775.340067789514 783.354401667817 30.265 0.33501 30.265 30.05 30.385 0 116 21 7 0 0 0 0.0076466 1 12015 56.359 56.359 1 0.73369 0.62505 0 5257000 2834900 2422100 40455 653 15252 15663 63472 63472 511 YLMEEDEDAYKK 12 2 0 Unmodified _YLMEEDEDAYKK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 512.2318 3 511.897435 1532.67048 83871.77 0.25356 0.00012979 0.0362 1.853E-05 0.28976 0.00014833 511.897351579022 517.240380446398 46.331 0.64959 46.331 46.071 46.721 0 239 42 7 0 0 0 0.047608 1 22226 13.413 13.413 1 1.1866 1.0191 0 7279000 3044700 4234300 40456 653 15252 15664 63473 63473 YLMEEDEDAYKK 12 2 0 Unmodified _YLMEEDEDAYKK_ 0 0 1 A2RUM7;P46777;Q59GX9;B3KTM6 A2RUM7 A2RUM7 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 767.3439 2 767.342514 1532.67048 69326.83 0.49306 0.00037835 -0.063298 -4.8571E-05 0.42976 0.00032978 767.342483288009 775.356930137201 46.325 0.52758 46.325 46.071 46.599 0 198 36 8 0 0 0 0.022463 1 22264 44.318 44.318 1 1.2189 1.055 0 3708300 1789800 1918500 40457 653 15252 15664 63474 63474 YLMGETQLCTTR 12 0 1 Oxidation (M) _YLM(ox)GETQLCTTR_ YLM(1)GETQLCTTR YLM(59.43)GETQLCTTR 0 1 0 Q9BRU9;G3XAM4;E5RGP0 Q9BRU9 Q9BRU9 UTP23 rRNA-processing protein UTP23 homolog ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 744.8453 2 744.844701 1487.67485 NaN NaN NaN 0.067072 4.9958E-05 NaN NaN NaN NaN 46.363 0.46574 46.363 46.173 46.639 0 0 0 0 0.0021605 1 25594 59.426 52.531 1 NaN NaN 0 4711300 4711300 0 40458 1999 15253 15665 63475 63475 1837 YLMGETQLCTTR 12 0 1 Oxidation (M) _YLM(ox)GETQLCTTR_ YLM(1)GETQLCTTR YLM(84.17)GETQLCTTR 0 1 0 Q9BRU9;G3XAM4;E5RGP0 Q9BRU9 Q9BRU9 UTP23 rRNA-processing protein UTP23 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 749.8527 2 744.844701 1487.67485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.437 1 46.437 45.937 46.937 0 0 0 0 0.00010138 1 25646 84.17 64.899 1 40459 1999 15253 15665 63476 63476 1837 YLNEQLYSGPSSAAQR 16 0 1 Unmodified _YLNEQLYSGPSSAAQR_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 892.4341 2 892.434115 1782.85368 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.151 1 62.151 61.651 62.651 -3.8147E-06 0 0 0 5.7913E-05 1 35660 114.72 93.491 1 40460 1380 15254 15666 63477 63477 YLNEQLYSGPSSAAQR 16 0 1 Unmodified _YLNEQLYSGPSSAAQR_ 0 0 0 O43159;E9PPY3 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.9365 2 892.434115 1782.85368 66741.71 0.56818 0.00050707 -0.84324 -0.00075254 -0.27506 -0.00024547 892.433387788496 897.939924527622 61.323 0.48444 61.323 61.129 61.613 0 170 44 6 0 0 0 6.03E-12 1 35853 113.24 105.63 1 0.80953 0.83808 0 21764000 12874000 8890300 40461 1380 15254 15666 63478 63478 YLNFFTK 7 1 0 Unmodified _YLNFFTK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 470.7549 2 466.747453 931.480354 88449.52 0.53612 0.00025023 -0.17591 -8.2104E-05 0.36022 0.00016813 466.747237560123 470.75435065198 86.579 0.63013 86.579 86.246 86.876 -7.6294E-06 223 46 8 0 0 0 0.028306 2 52042 72.138 56.917 1 0.68085 0.76762 0 113090000 67526000 45559000 40462 1473 15255 15667 63479;63480 63480 YLNFFTK 7 1 0 Unmodified _YLNFFTK_ 0 0 0 Q6FI35;Q6FHF5;P12004 Q6FI35 Q6FI35 PCNA Proliferating cell nuclear antigen MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 466.7476 2 466.747453 931.480354 87745.3 0.15818 7.3828E-05 0.079397 3.7059E-05 0.23757 0.00011089 466.74737875285 470.754537937304 85.437 0.58389 85.437 85.202 85.786 0 221 44 8 0 0 0 0.033843 1 52474 63.301 46.754 1 0.67795 0.75959 0 80957000 45494000 35463000 40463 1473 15255 15667 63481 63481 YLNPLQTDAAENNVCDINSVHGLFATGTIEGR 32 0 1 Unmodified _YLNPLQTDAAENNVCDINSVHGLFATGTIEGR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1164.5645 3 1163.89496 3488.66305 55317.62 0.10181 0.00011849 0.25017 0.00029117 0.35198 0.00040966 1164.22928802719 1167.89980562151 115.54 0.56476 115.54 115.26 115.82 0 313 38 15 0 0 0 1.3458E-19 3 73516 73.107 73.107 1 0.81978 0.90987 0 69301000 37565000 31737000 40464 2000 15256 15668 63482;63483;63484 63484 YLNPLQTDAAENNVCDINSVHGLFATGTIEGR 32 0 1 Unmodified _YLNPLQTDAAENNVCDINSVHGLFATGTIEGR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1167.8998 3 1163.89496 3488.66305 55423.6 0.23989 0.00027921 0.071294 8.2979E-05 0.31119 0.00036219 1164.22907719988 1167.56484083704 114.97 0.45771 114.97 114.78 115.24 0 273 29 14 0 0 0 3.1199E-53 2 74866 127.92 127.92 1 0.91807 1.06 0 70616000 36916000 33701000 40465 2000 15256 15668 63485;63486 63485 YLNPLQTDAAENNVCDINSVHGLFATGTIEGR 32 0 1 Unmodified _YLNPLQTDAAENNVCDINSVHGLFATGTIEGR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1167.8998 3 1163.89496 3488.66305 55703.87 0.067844 7.8963E-05 -0.1194 -0.00013896 -0.051551 -6E-05 1164.56356242868 1167.56477656571 126.93 0.8962 126.93 126.47 127.37 0 247 36 13 0 0 0 1.3404E-78 2 76387 162 162 1 1.4259 1.2282 0 61170000 24189000 36981000 40466 2000 15256 15668 63487;63488 63487 YLNPLQTDAAENNVCDINSVHGLFATGTIEGR 32 0 1 Unmodified _YLNPLQTDAAENNVCDINSVHGLFATGTIEGR_ 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1167.5651 3 1163.89496 3488.66305 55273.47 0.14835 0.00017267 -0.086306 -0.00010045 0.062048 7.2217E-05 1164.22944028732 1167.56493124068 126.79 0.65591 126.79 126.44 127.1 0 220 28 13 0 0 0 3.3417E-37 2 75382 110.4 110.4 1 1.4053 1.2264 0 70957000 26901000 44055000 40467 2000 15256 15668 63489;63490 63489 YLNTNPVGGLLEYAR 15 0 1 Unmodified _YLNTNPVGGLLEYAR_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 845.4464 2 840.441212 1678.86787 66602.89 0.977 0.00082112 0.87601 0.00073624 1.853 0.0015574 840.441990164988 845.445338764059 114.03 0.57162 114.03 113.77 114.35 0 131 41 5 0 0 0 5.3278E-15 2 72205 125.54 118.16 1 1.7509 1.8256 0 21332000 7307300 14025000 40468 5 15257 15669 63491;63492 63492 YLNTNPVGGLLEYAR 15 0 1 Unmodified _YLNTNPVGGLLEYAR_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 845.9473 2 840.441212 1678.86787 66465.72 0.76471 0.0006427 0.57851 0.0004862 1.3432 0.0011289 840.44227264342 845.44535051785 113.45 0.49068 113.45 113.17 113.66 0 109 34 4 0 0 0 3.7133E-08 1 73528 111.94 111.94 1 1.7795 1.8007 0 19983000 8043500 11939000 40469 5 15257 15669 63493 63493 YLNTNPVGGLLEYAR 15 0 1 Unmodified _YLNTNPVGGLLEYAR_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.4435 2 840.441212 1678.86787 65039.79 0.80959 0.00068041 0.77971 0.0006553 1.5893 0.0013357 840.441501087609 845.445079482843 125.59 0.54385 125.59 125.35 125.89 0 69 20 7 0 0 0 0.017855 1 75509 32.062 25.959 1 1.3889 1.1797 0 5230900 2008400 3222600 40470 5 15257 15669 63494 63494 YLNTNPVGGLLEYAR 15 0 1 Unmodified _YLNTNPVGGLLEYAR_ 0 0 0 A0A024DAK3;Q59EC0;P55265;D3DV75;H0YCK3;B7Z8Y3 A0A024DAK3 A0A024DAK3 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 840.9241 2 840.441212 1678.86787 68890.29 0.76002 0.00063875 0.63965 0.00053759 1.3997 0.0011763 840.441227701645 845.445138723218 125.41 0.60271 125.41 125.01 125.61 7.6294E-06 73 25 7 0 0 0 0.035479 1 74346 41.48 41.48 1 1.3512 1.1216 0 5819500 2446300 3373300 40471 5 15257 15669 63495 63495 YLPDTLLLEECGLLR 15 0 1 Unmodified _YLPDTLLLEECGLLR_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964;E7EMS6 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 903.4805 2 902.979312 1803.94407 64717.54 1.0308 0.0009308 -0.26381 -0.00023822 0.767 0.00069259 903.480756203725 907.98327343834 125.52 0.62977 125.52 125.18 125.8 -7.6294E-06 203 40 8 0 0 0 0.00022163 1 81523 66.267 66.267 1 1.7572 1.8046 0 14298000 5087100 9211200 40472 601 15258 15670 63496 63496 YLPDTLLLEECGLLR 15 0 1 Unmodified _YLPDTLLLEECGLLR_ 0 0 0 B8XPJ7;B8XPJ8;A0A140VJG8;P21964;E7EMS6 B8XPJ7 B8XPJ7 COMT Catechol O-methyltransferase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 902.979 2 902.979312 1803.94407 65374.44 1.0305 0.0009305 -0.76647 -0.00069211 0.264 0.00023839 902.979030091846 907.983451776938 125.09 0.49188 125.09 124.83 125.33 7.6294E-06 211 35 9 0 0 0 0.00022107 2 83210 65.395 65.395 1 1.752 1.7381 0 15905000 5165100 10740000 40473 601 15258 15670 63497;63498 63498 YLPELMAEK 9 1 0 Oxidation (M) _YLPELM(ox)AEK_ YLPELM(1)AEK YLPELM(41.03)AEK 0 1 0 B4DDX2;Q07666;B4E043;B3KTS3;O75525;Q5VWX1 B4DDX2 B4DDX2 KHDRBS1;KHDRBS3;KHDRBS2 KH domain-containing, RNA-binding, signal transduction-associated protein 1;KH domain-containing, RNA-binding, signal transduction-associated protein 3;KH domain-containing, RNA-binding, signal transduction-associated protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 559.2884 2 555.281 1108.54745 84021.11 0.56926 0.0003161 -0.51866 -0.000288 0.050602 2.8099E-05 555.280944220688 559.28720334965 60.933 1.0246 60.933 60.731 61.756 0 176 76 5 0 0 0 0.020597 1 34772 41.029 41.029 1 2.091 2.1076 0 27232000 10486000 16746000 40474 962 15259 15671 63499 63499 776 YLPHSAGR 8 0 1 Unmodified _YLPHSAGR_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 300.8276 3 300.827726 899.46135 107354.7 -0.20409 -6.1395E-05 0.063892 1.9221E-05 -0.14019 -4.2174E-05 300.827714858418 304.163765206508 17.159 0.53784 17.159 17.021 17.558 0 65 17 8 0 0 0 0.0016503 2 4353 78.324 63.65 1 1.1061 1.2298 0 74865000 35457000 39409000 40475 160 15260 15672 63500;63501 63501 YLPHSAGR 8 0 1 Unmodified _YLPHSAGR_ 0 0 0 M0R0F0;Q53G25;A0A024R4Q8;P46782;M0R0R2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 450.7378 2 450.737951 899.46135 89689.85 -0.035728 -1.6104E-05 -0.30461 -0.0001373 -0.34034 -0.0001534 450.737910917982 455.741895616377 17.16 0.8466 17.16 16.933 17.78 0 125 28 11 0 0 0 0.00045359 2 4349 132.09 113.31 1 1.1003 1.2967 0 240620000 112980000 127640000 40476 160 15260 15672 63502;63503 63503 YLPISHPR 8 0 1 Unmodified _YLPISHPR_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.7797 2 491.777077 981.5396 87277.56 -0.17705 -8.7067E-05 0.0044032 2.1654E-06 -0.17264 -8.4902E-05 491.777087339509 496.780314935089 29.277 0.34428 29.277 29.086 29.431 0 71 23 5 0 0 0 0.026448 1 14155 54.549 54.549 1 1.2074 1.2082 0 16895000 9156800 7738000 40477 1741 15261 15673 63504 63504 YLPISHPR 8 0 1 Unmodified _YLPISHPR_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 331.5234 3 328.187143 981.5396 NaN NaN NaN 0.59554 0.00019545 NaN NaN NaN NaN 29.46 0.28539 29.46 29.392 29.677 0 0 0 0 0.017244 1 14308 47.082 36.372 1 NaN NaN 0 6611500 0 6611500 40478 1741 15261 15673 63505 63505 YLPISHPR 8 0 1 Unmodified _YLPISHPR_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.7818 2 491.777077 981.5396 88574.59 -0.0011295 -5.5544E-07 0.39076 0.00019217 0.38963 0.00019161 491.777051546206 496.781094679997 32.927 0.36277 32.927 32.796 33.159 0 83 22 6 0 0 0 0.042651 1 14336 46.426 46.426 1 1.3005 1.1173 0 7978200 3356600 4621600 40479 1741 15261 15673 63506 63506 YLPISHPR 8 0 1 Unmodified _YLPISHPR_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 496.7813 2 491.777077 981.5396 88380.49 0.10346 5.0877E-05 0.30884 0.00015188 0.41229 0.00020276 491.777004888494 496.781087634631 32.903 0.32101 32.903 32.759 33.08 0 58 14 6 0 0 0 0.033206 1 13840 50.127 50.127 1 1.4618 1.1931 0 9379200 3659700 5719500 40480 1741 15261 15673 63507 63507 YLPISHPR 8 0 1 Unmodified _YLPISHPR_ 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 331.5231 3 328.187143 981.5396 105006.8 -0.17662 -5.7963E-05 0.14203 4.6613E-05 -0.034586 -1.1351E-05 328.186919024974 331.523252866565 32.918 0.38623 32.918 32.694 33.08 0 55 17 6 0 0 0 0.043477 1 13844 28.918 25.079 1 1.1633 0.96903 0 6300900 2669700 3631200 40481 1741 15261 15673 63508 63508 YLPPATQVVLISATLPHEILEMTNK 25 1 0 Oxidation (M) _YLPPATQVVLISATLPHEILEM(ox)TNK_ YLPPATQVVLISATLPHEILEM(1)TNK YLPPATQVVLISATLPHEILEM(52.93)TNK 0 1 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 935.1802 3 932.173494 2793.49865 62174.75 0.28309 0.00026389 0.1393 0.00012985 0.42239 0.00039374 932.841871537366 935.179540196705 133.3 0.40517 133.3 133.1 133.5 0 72 11 10 0 0 0 1.8224E-09 1 87209 52.927 52.927 1 2.721 3.0791 0 101900000 25237000 76663000 40482 261 15262 15674 63509 63509 201 YLQGTGCIAGLLLPGSQER 19 0 1 Unmodified _YLQGTGCIAGLLLPGSQER_ 0 0 0 A0A075B730;A0A087X1U6;P58107 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1022.532 2 1017.02786 2032.04116 59720.42 0.72511 0.00073745 -0.99656 -0.0010135 -0.27145 -0.00027608 1017.52906935438 1022.03114929017 128 0.50853 128 127.7 128.21 0 62 19 5 0 0 0 0.011315 1 77179 24.72 24.72 1 1.8285 1.5568 0 2834000 841520 1992500 40483 397;1622 15263 15675 63510 63510 YLQLAEELIRPER 13 0 2 Unmodified _YLQLAEELIRPER_ 0 0 1 Q14566;Q4ZG57;B4E0N7 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 544.3041 3 543.970145 1628.88861 82674.85 0.63429 0.00034504 0.36589 0.00019903 1.0002 0.00054407 543.970021489492 550.64277019603 98.226 0.80893 98.226 97.904 98.713 0 241 69 5 0 0 0 0.0039683 1 61326 43.761 43.761 1 1.9122 2.1624 0 30697000 10546000 20151000 40484 1734 15264 15676 63511 63511 YLQLAEELIRPER 13 0 2 Unmodified _YLQLAEELIRPER_ 0 0 1 Q14566;Q4ZG57;B4E0N7 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 543.9709 3 543.970145 1628.88861 81979.7 0.8245 0.0004485 0.16591 9.0251E-05 0.99041 0.00053875 543.970313920682 550.642570514047 111.22 0.39966 111.22 111.01 111.41 0 58 16 5 0 0 0 0.025822 1 64410 27.967 27.967 1 0.87436 0.79704 0 2324400 1211400 1113000 40485 1734 15264 15676 63512 63512 YLQLAEELIRPER 13 0 2 Unmodified _YLQLAEELIRPER_ 0 0 1 Q14566;Q4ZG57;B4E0N7 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 550.6434 3 543.970145 1628.88861 83265.72 0.64335 0.00034996 0.044185 2.4035E-05 0.68753 0.000374 543.970067299625 550.642433125198 110.93 0.38319 110.93 110.81 111.19 0 88 19 7 0 0 0 0.02056 2 63253 30.438 30.438 1 0.9138 0.81771 0 2219300 1218500 1000900 40486 1734 15264 15676 63513;63514 63514 YLRPPNTSLFVR 12 0 2 Unmodified _YLRPPNTSLFVR_ 0 0 1 Q5JRI1;Q53GD7;A0A0S2Z504;O75494;Q6IQ42;R4GMP8 Q5JRI1 Q5JRI1 SRSF10;FUSIP1 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.949 3 488.277021 1461.80923 85929.54 0.47566 0.00023225 -0.06906 -3.372E-05 0.4066 0.00019853 488.277121955664 494.949111396832 80.24 1.3969 80.24 79.76 81.157 0 572 118 6 0 0 0 0.001423 3 48000 56.951 56.951 1 1.1605 1.262 0 50042000 21940000 28101000 40487 574 15265 15677 63515;63516;63517 63517 YLRPPNTSLFVR 12 0 2 Unmodified _YLRPPNTSLFVR_ 0 0 1 Q5JRI1;Q53GD7;A0A0S2Z504;O75494;Q6IQ42;R4GMP8 Q5JRI1 Q5JRI1 SRSF10;FUSIP1 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.6111 3 488.277021 1461.80923 86914.01 0.10686 5.2179E-05 0.022549 1.101E-05 0.12941 6.3189E-05 488.276948575478 494.949206439442 78.206 1.1141 78.206 77.605 78.719 0 453 96 6 0 0 0 0.0069592 2 47234 40.031 40.031 1 1.096 1.2627 0 61799000 29150000 32650000 40488 574 15265 15677 63518;63519 63519 YLRPPNTSLFVR 12 0 2 Unmodified _YLRPPNTSLFVR_ 0 0 1 Q5JRI1;Q53GD7;A0A0S2Z504;O75494;Q6IQ42;R4GMP8 Q5JRI1 Q5JRI1 SRSF10;FUSIP1 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 494.9496 3 488.277021 1461.80923 87053.34 0.088037 4.2986E-05 0.15663 7.6479E-05 0.24467 0.00011947 488.277103534805 494.94930248298 90.148 0.81151 90.148 89.722 90.533 7.6294E-06 251 54 6 0 0 0 0.034391 1 49055 28.624 21.254 1 0.70404 0.63973 0 6262900 3768000 2494900 40489 574 15265 15677 63520 63520 YLSADSGDADDSDADLGSAVK 21 1 0 Unmodified _YLSADSGDADDSDADLGSAVK_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1040.4564 2 1036.45055 2070.88655 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.549 1 67.549 67.049 68.049 0 0 0 0 7.4935E-08 1 39062 73.834 68.228 1 40490 247 15266 15678 63521 63521 YLSADSGDADDSDADLGSAVK 21 1 0 Unmodified _YLSADSGDADDSDADLGSAVK_ 0 0 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1036.9512 2 1036.45055 2070.88655 62231.69 0.36567 0.000379 -0.023224 -2.4071E-05 0.34245 0.00035493 1036.95000500611 1040.45777319296 66.755 0.27919 66.755 66.681 66.96 0 40 23 4 0 0 0 0.00021741 1 39473 50.088 50.088 1 1.6853 1.7237 0 9353900 2660100 6693800 40491 247 15266 15678 63522 63522 YLSFEAEEK 9 1 0 Unmodified _YLSFEAEEK_ 0 0 0 Q7Z3K3;B4DSK8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.2668 2 558.266404 1114.51826 82351.55 0.66278 0.00037001 -0.61483 -0.00034324 0.047949 2.6768E-05 558.266338487573 562.77418567145 56.802 0.56333 56.802 56.56 57.124 0 203 51 5 0 0 0 0.023107 1 31983 48.794 31.409 1 1.0975 1.1197 0 10429000 5768400 4660600 40492 1874 15267 15679 63523 63523 YLTEHPDPNNENIVGYNNK 19 1 0 Unmodified _YLTEHPDPNNENIVGYNNK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 747.0216 3 744.350301 2230.02907 70815.89 0.64038 0.00047667 -0.14832 -0.0001104 0.49206 0.00036627 744.684647706301 747.355890126621 56.669 0.79751 56.669 56.341 57.138 0 409 71 8 0 0 0 1.5572E-12 2 31839 105.39 105.39 1 0.82462 0.81086 0 23630000 13378000 10252000 40493 1854 15268 15680 63524;63525 63525 YLTEHPDPNNENIVGYNNK 19 1 0 Unmodified _YLTEHPDPNNENIVGYNNK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 747.0215 3 744.350301 2230.02907 70582 0.47542 0.00035388 0.12856 9.5692E-05 0.60398 0.00044957 744.68464422092 747.021890749164 55.43 0.64381 55.43 55.101 55.744 0 259 46 7 0 0 0 7.6774E-10 1 31855 99.569 99.569 1 0.86806 0.89298 0 32358000 16162000 16195000 40494 1854 15268 15680 63526 63526 YLTEHPDPNNENIVGYNNK 19 1 0 Unmodified _YLTEHPDPNNENIVGYNNK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 747.0219 3 744.350301 2230.02907 70307.54 0.9073 0.00067535 -0.52257 -0.00038897 0.38473 0.00028638 744.684280048677 747.021472868172 65.954 0.5304 65.954 65.711 66.241 0 246 37 10 0 0 0 0.032805 2 34070 16.615 16.615 1 0.85999 0.68004 0 5111600 2793400 2318200 40495 1854 15268 15680 63527;63528 63527 YLTEHPDPNNENIVGYNNK 19 1 0 Unmodified _YLTEHPDPNNENIVGYNNK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 744.6848 3 744.350301 2230.02907 70058.51 0.52909 0.00039383 -0.35036 -0.00026079 0.17873 0.00013303 744.684463506842 747.021514411045 66.558 0.6153 66.558 66.268 66.883 0 241 40 8 0 0 0 0.0052538 1 33769 23.853 23.853 1 0.80501 0.63306 0 3850300 1829700 2020600 40496 1854 15268 15680 63529 63529 YLTVAAIFR 9 0 1 Unmodified _YLTVAAIFR_ 0 0 0 Q13885;B2R6L0;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2 Q13885 Q13885 TUBB2A;TUBB2B;DKFZp566F223 Tubulin beta-2A chain;Tubulin beta-2B chain MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 532.3122 2 527.30821 1052.60187 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.76 1 109.76 109.26 110.26 0 0 0 0 0.0019261 1 68782 89.142 24.366 1 40497 1723 15269 15681 63530 63530 YLTVAAVFR 9 0 1 Unmodified _YLTVAAVFR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.3046 2 520.300384 1038.58622 83506.76 0.35751 0.00018601 -0.033519 -1.744E-05 0.32399 0.00016857 520.300436222425 525.30436043906 99.195 1.6561 99.195 98.556 100.21 0 730 137 8 0 0 0 4.0887E-05 4 60955 112.17 83.659 1 1.4691 1.7396 0 401520000 161560000 239950000 40498 1452;1660;1441 15270 15682 63531;63532;63533;63534 63533 YLTVAAVFR 9 0 1 Unmodified _YLTVAAVFR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.3007 2 520.300384 1038.58622 84534.7 0.65212 0.0003393 0.14716 7.6566E-05 0.79928 0.00041586 520.300447335405 525.304702040436 100.71 0.79498 100.71 100.21 101.01 0 122 60 4 0 0 0 0.016119 1 61615 54.157 38.718 1 1.7411 1.8245 0 10946000 3389800 7556100 40499 1452;1660;1441 15270 15682 63535 63535 YLTVAAVFR 9 0 1 Unmodified _YLTVAAVFR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.3007 2 520.300384 1038.58622 83576.3 0.5339 0.00027779 -0.03566 -1.8554E-05 0.49824 0.00025924 520.300445498761 525.304386940797 98.197 1.6834 98.197 97.653 99.337 0 916 142 10 0 0 0 1.1813E-05 4 61702 125.25 87.607 1 1.4938 1.7609 0 1170100000 464250000 705900000 40500 1452;1660;1441 15270 15682 63536;63537;63538;63539 63538 YLTVAAVFR 9 0 1 Unmodified _YLTVAAVFR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.301 2 520.300384 1038.58622 84728.84 0.52931 0.0002754 -0.013252 -6.895E-06 0.51605 0.0002685 520.300515566179 525.30456201161 99.507 0.42848 99.507 99.315 99.743 0 83 34 4 0 0 0 0.0025185 1 62280 74.127 55.397 1 1.3217 1.3304 0 6553100 2256300 4296700 40501 1452;1660;1441 15270 15682 63540 63540 YLTVAAVFR 9 0 1 Unmodified _YLTVAAVFR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 520.3004 2 520.300384 1038.58622 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.24 1 100.24 99.742 100.74 0 0 0 0 0.011714 1 62951 61.999 41.444 1 40502 1452;1660;1441 15270 15682 63541 63541 YLTVAAVFR 9 0 1 Unmodified _YLTVAAVFR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 520.3003 2 520.300384 1038.58622 84185.53 0.59586 0.00031003 0.071869 3.7393E-05 0.66773 0.00034742 520.30033647191 525.304438902065 111.98 1.4482 111.98 111.66 113.11 0 405 79 8 0 0 0 0.00092261 3 64843 92.47 66.644 1 1.2599 1.0876 0 87824000 41104000 46720000 40503 1452;1660;1441 15270 15682 63542;63543;63544 63542 YLTVAAVFR 9 0 1 Unmodified _YLTVAAVFR_ 0 0 0 Q5JP53;Q5SU16;P07437;B7ZAF0;B4DY90;Q6LC01;Q5ST81;B7ZAK1;Q9BUU9;B4E052;B4DMU8;Q96B85;B4DXZ5;Q1KSF8;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;B4DFH6;P04350;B4DE77;B4DJ43 Q5JP53;Q8IZ29;P04350 Q5JP53 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 520.3006 2 520.300384 1038.58622 83520.35 0.35351 0.00018393 0.17966 9.3479E-05 0.53318 0.00027741 520.300458076609 525.304433775732 111.74 1.4025 111.74 111.43 112.83 -7.6294E-06 375 76 8 0 0 0 0.0014644 3 63740 85.064 66.333 1 1.2132 1.0585 0 51949000 22983000 28966000 40504 1452;1660;1441 15270 15682 63545;63546;63547 63545 YLTVATVFR 9 0 1 Unmodified _YLTVATVFR_ 0 0 0 Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q9BV28;Q9BUF5 Q9BUF5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 540.31 2 535.305667 1068.59678 NaN NaN NaN -0.031291 -1.675E-05 NaN NaN NaN NaN 95.85 0.80243 95.85 95.452 96.254 0 0 0 0 4.7432E-06 1 58192 116.73 96.101 1 NaN NaN 0 29127000 0 29127000 40505 2004;502 15271 15683 63548 63548 YLTVATVFR 9 0 1 Unmodified _YLTVATVFR_ 0 0 0 Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q9BV28;Q9BUF5 Q9BUF5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 540.3095 2 535.305667 1068.59678 NaN NaN NaN -0.24303 -0.00013009 NaN NaN NaN NaN 94.911 0.77599 94.911 94.445 95.221 7.6294E-06 0 0 0 4.7432E-06 1 58829 116.73 96.101 1 NaN NaN 0 27168000 0 27168000 40506 2004;502 15271 15683 63549 63549 YLTVATVFR 9 0 1 Unmodified _YLTVATVFR_ 0 0 0 Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q9BV28;Q9BUF5 Q9BUF5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 535.3045 2 535.305667 1068.59678 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.59 1 94.59 94.09 95.09 0 0 0 0 0.0033584 1 58805 71.692 42.119 1 40507 2004;502 15271 15683 63550 63550 YLTVATVFR 9 0 1 Unmodified _YLTVATVFR_ 0 0 0 Q9BV28;B2RBD5;A0A0B4J269;Q13509;Q53G92;Q3ZCR3;Q9BUF5;B4DP54;K7ESM5;B3KS31;B4E386 Q9BV28;Q9BUF5 Q9BUF5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 540.3104 2 535.305667 1068.59678 82859.97 0.69094 0.00036987 -0.81285 -0.00043512 -0.1219 -6.5255E-05 535.305473246977 540.309848835649 108.9 0.53581 108.9 108.68 109.21 7.6294E-06 91 26 6 0 0 0 0.0016784 1 62690 82.279 69.752 1 1.4037 1.1739 0 3812500 1848300 1964200 40508 2004;502 15271 15683 63551 63551 YLVIDEAHR 9 0 1 Unmodified _YLVIDEAHR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 375.8693 3 372.532979 1114.57711 98370.52 0.26442 9.8504E-05 0.17214 6.4129E-05 0.43656 0.00016263 372.532888018347 375.869110033525 43.7 0.91268 43.7 43.264 44.177 0 324 80 6 0 0 0 0.00044722 2 23392 85.676 74.511 1 2.1895 2.3277 0 42788000 12262000 30525000 40509 1391 15272 15684 63552;63553 63552 YLVIDEAHR 9 0 1 Unmodified _YLVIDEAHR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 563.2999 2 558.29583 1114.57711 81422.73 0.71252 0.0003978 -0.46832 -0.00026146 0.2442 0.00013634 558.29526793651 563.299676067752 42.877 0.77967 42.877 42.486 43.265 0 295 64 7 0 0 0 0.0036023 2 23181 71.379 44.777 1 2.3988 2.7438 0 159450000 51784000 107670000 40510 1391 15272 15684 63554;63555 63554 YLVIDEAHR 9 0 1 Unmodified _YLVIDEAHR_ 0 0 0 O60264;B7ZAX9;B4DZC0;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;Q4W5H1;D7EZH4 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 563.301 2 558.29583 1114.57711 80861.51 0.49321 0.00027536 0.32557 0.00018177 0.81878 0.00045712 558.295963659783 563.300043742174 50.128 1.0967 50.128 49.655 50.752 0 376 88 7 0 0 0 0.002701 1 24406 73.665 47.063 1 5.2353 4.2908 0 16726000 2848800 13878000 40511 1391 15272 15684 63556 63556 YLVLDEADR 9 0 1 Unmodified _YLVLDEADR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010;B4E132;D6RCM4;Q9NQI0 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 547.28 2 547.279846 1092.54514 NaN NaN NaN -0.019242 -1.0531E-05 NaN NaN NaN NaN 66.012 0.63936 66.012 65.614 66.253 0 0 0 0 0.0063465 1 37873 72.485 60.129 1 NaN NaN 0 22974000 22974000 0 40512 522 15273 15685 63557 63557 YLVLDEADR 9 0 1 Unmodified _YLVLDEADR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010;B4E132;D6RCM4;Q9NQI0 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 552.2825 2 547.279846 1092.54514 81114.95 0.38563 0.00021105 0.092019 5.036E-05 0.47765 0.00026141 547.279826079434 552.283935124187 64.895 0.62932 64.895 64.479 65.108 0 261 54 8 0 0 0 0.0017345 3 38056 81.548 81.548 1 1.4379 1.6462 0 85526000 37609000 47916000 40513 522 15273 15685 63558;63559;63560 63558 YLVLDEADR 9 0 1 Unmodified _YLVLDEADR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010;B4E132;D6RCM4;Q9NQI0 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 552.2845 2 547.279846 1092.54514 81697.07 0.53159 0.00029093 -0.03574 -1.956E-05 0.49585 0.00027137 547.27988944489 552.283704993974 75.288 0.91924 75.288 74.938 75.857 0 260 66 6 0 0 0 0.032187 2 39922 45.161 45.161 1 1.1194 0.94064 0 4352200 2111300 2240900 40514 522 15273 15685 63561;63562 63561 YLVLDEADR 9 0 1 Unmodified _YLVLDEADR_ 0 0 0 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4DLU5;B4E010;B4E132;D6RCM4;Q9NQI0 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 552.2841 2 547.279846 1092.54514 81803.67 0.40281 0.00022045 -0.010282 -5.6273E-06 0.39253 0.00021482 547.279884385446 552.283669171991 75.647 0.90523 75.647 75.277 76.182 0 277 65 6 0 0 0 0.034216 2 39372 44.349 44.349 1 1.1943 1.0474 0 3588000 1781200 1806800 40515 522 15273 15685 63563;63564 63564 YLVMDEADR 9 0 1 Oxidation (M) _YLVM(ox)DEADR_ YLVM(1)DEADR YLVM(53.77)DEADR 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 569.2598 2 564.255514 1126.49647 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.317 1 33.317 32.817 33.817 0 0 0 0 0.012677 1 16583 53.775 33.998 1 40516 313 15274 15686 63565 63565 231 YLVMDEADR 9 0 1 Oxidation (M) _YLVM(ox)DEADR_ YLVM(1)DEADR YLVM(53.77)DEADR 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 564.2559 2 564.255514 1126.49647 82923.05 0.60544 0.00034162 0.21012 0.00011856 0.81556 0.00046018 564.255502738332 569.259656795364 33.872 0.40318 33.872 33.714 34.117 0 100 32 4 0 0 0 0.0080146 1 17061 53.775 48.787 1 1.528 1.5231 0 16577000 6621200 9955300 40517 313 15274 15686 63566 63566 231 YLVMDEADR 9 0 1 Oxidation (M) _YLVM(ox)DEADR_ YLVM(1)DEADR YLVM(44.35)DEADR 0 1 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 564.2561 2 564.255514 1126.49647 82059.71 0.30007 0.00016932 0.16481 9.2994E-05 0.46488 0.00026231 564.255597795633 569.25974568858 38.302 0.46928 38.302 38.042 38.512 0 132 35 6 0 0 0 0.016577 1 16852 44.349 40.939 1 0.80443 0.70071 0 1503300 806710 696550 40518 313 15274 15686 63567 63567 231 YLVMDEADR 9 0 1 Unmodified _YLVMDEADR_ 0 0 0 Q53GJ1;A0A024RAS3;Q9H0S4;Q9H4E3;A4UCU0;F5H1N9 Q53GJ1 Q53GJ1 hCG_27698;DDX47;E4-DBP Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 561.7649 2 556.258056 1110.50156 84354.88 0.41878 0.00023295 0.41676 0.00023183 0.83554 0.00046477 556.258514719456 561.26231057802 61.022 0.48945 61.022 60.825 61.315 0 114 38 4 0 0 0 0.0074668 2 31179 61.962 48.925 1 1.6554 1.4352 0 2488500 748190 1740300 40519 313 15274 15687 63568;63569 63568 YLVSLGCIK 9 1 0 Unmodified _YLVSLGCIK_ 0 0 0 B4DII5;B4DWX3;O60684 B4DII5 B4DII5 KPNA6 Importin subunit alpha;Importin subunit alpha-7 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 530.8011 2 526.794078 1051.5736 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.983 1 86.983 86.483 87.483 0 0 0 0 0.011752 1 53607 61.962 36.068 1 40520 980 15275 15688 63570 63570 YLVVGR 6 0 1 Unmodified _YLVVGR_ 0 0 0 Q6NUN2;A3F769;O15226;A3F768;A2I829 Q6NUN2 Q6NUN2 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 353.7169 2 353.715956 705.41736 101515.1 0.31188 0.00011032 0.037428 1.3239E-05 0.34931 0.00012356 353.715966983203 358.719862463643 38.515 0.42165 38.515 38.303 38.725 -3.8147E-06 113 36 5 0 0 0 0.034273 1 20245 112.58 11.67 1 0.72192 0.78947 0 34965000 20125000 14840000 40521 655 15276 15689 63571 63571 YLYEIAR 7 0 1 Unmodified _YLYEIAR_ 0 0 0 CON__P02769;H7C013 CON__P02769 CON__P02769 ALB ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 464.2502 2 464.25036 926.486168 NaN NaN NaN -0.41052 -0.00019058 NaN NaN NaN NaN 59.902 0.57719 59.902 59.657 60.235 0 0 0 0 0.030945 1 34137 68.485 0 1 NaN NaN 0 35343000 35343000 0 + 40522 1153 15277 15690 63572 63572 YLYFLYLK 8 1 0 Unmodified _YLYFLYLK_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.8145 2 561.815336 1121.61612 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.49 1 116.49 115.99 116.99 -7.6294E-06 0 0 0 0.029494 1 76233 63.148 37.254 1 40523 2042 15278 15691 63573 63573 YLYSSEDYIK 10 1 0 Unmodified _YLYSSEDYIK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13041 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 640.8069 2 640.805894 1279.59723 77182.6 0.59338 0.00038024 0.3012 0.00019301 0.89458 0.00057325 641.307487133443 644.813117036894 68.283 0.63081 68.283 68.095 68.726 0 220 54 5 0 0 0 0.0029629 3 39592 66.692 59.844 1 1.8865 1.938 0 17514000 5788300 11726000 40524 1707 15279 15692 63574;63575;63576 63575 YLYSSEDYIK 10 1 0 Unmodified _YLYSSEDYIK_ 0 0 0 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13041 Q59EG8 Q59EG8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 644.8129 2 640.805894 1279.59723 77630.2 0.64278 0.00041189 0.20062 0.00012856 0.8434 0.00054045 640.80595417323 644.813036338221 67.168 0.62027 67.168 66.903 67.523 7.6294E-06 197 51 5 0 0 0 0.00016057 1 39729 95.358 95.358 1 2.3028 2.4029 0 19190000 6725000 12465000 40525 1707 15279 15692 63577 63577 YLYTLVITDK 10 1 0 Unmodified _YLYTLVITDK_ 0 0 0 A0A024R8P8;P63173;J3KT73;J3QL01 A0A024R8P8 A0A024R8P8 RPL38 60S ribosomal protein L38 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 614.8458 2 614.844822 1227.67509 78734.18 0.43897 0.0002699 0.43824 0.00026945 0.8772 0.00053934 614.84473099245 619.354191768207 99.304 1.2738 99.304 98.636 99.91 0 490 104 7 0 0 0 1.5494E-05 1 60561 101.11 101.11 1 1.1668 1.3112 0 69719000 45406000 24314000 40526 253 15280 15693 63578 63578 YLYTLVITDK 10 1 0 Unmodified _YLYTLVITDK_ 0 0 0 A0A024R8P8;P63173;J3KT73;J3QL01 A0A024R8P8 A0A024R8P8 RPL38 60S ribosomal protein L38 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 618.8522 2 614.844822 1227.67509 78097.88 0.56496 0.00034736 0.11774 7.2391E-05 0.6827 0.00041975 614.844716936261 618.851962066152 98.397 1.2349 98.397 97.971 99.206 0 593 106 8 0 0 0 0.00034741 3 61884 89.247 89.247 1 1.0771 1.2578 0 274750000 134050000 140690000 40527 253 15280 15693 63579;63580;63581 63581 YLYTLVITDK 10 1 0 Unmodified _YLYTLVITDK_ 0 0 0 A0A024R8P8;P63173;J3KT73;J3QL01 A0A024R8P8 A0A024R8P8 RPL38 60S ribosomal protein L38 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 618.8528 2 614.844822 1227.67509 76263.84 0.71012 0.00043661 -0.59326 -0.00036476 0.11686 7.1848E-05 614.84406180705 618.851418900433 111.8 1.364 111.8 111.47 112.83 0 336 77 8 0 0 0 0.0011557 3 64729 75.294 75.294 1 1.4635 1.2004 0 36878000 14131000 22747000 40528 253 15280 15693 63582;63583;63584 63582 YLYTLVITDK 10 1 0 Unmodified _YLYTLVITDK_ 0 0 0 A0A024R8P8;P63173;J3KT73;J3QL01 A0A024R8P8 A0A024R8P8 RPL38 60S ribosomal protein L38 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 614.845 2 614.844822 1227.67509 77394.93 0.51109 0.00031424 -0.42647 -0.00026222 0.084612 5.2023E-05 614.844179065293 618.851569045094 111.64 1.3489 111.64 111.21 112.56 0 332 74 8 0 0 0 0.0011557 2 63728 75.294 75.294 1 1.4001 1.1562 0 31272000 12339000 18934000 40529 253 15280 15693 63585;63586 63586 YMACCLLYR 9 0 1 Oxidation (M) _YM(ox)ACCLLYR_ YM(1)ACCLLYR YM(52.4)ACCLLYR 0 1 0 A6NHL2;B3KT06;B3KPS3;P68363;A8JZY9;B4DDU2;Q53GA7;F5H5D3;Q9BQE3;B7Z1K5;Q8N532;P68366;Q71U36;B4DQK4;Q9UQM3 A6NHL2;B3KT06;Q53GA7;P68366;Q71U36 B3KT06 TUBAL3;TUBA1B;TUBA1C;TUBA4A;TUBA1A Tubulin alpha chain-like 3;Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 633.2778 2 633.277412 1264.54027 75613.09 0.54455 0.00034485 -0.2094 -0.00013261 0.33515 0.00021224 633.277435028171 638.281120396262 76.989 0.6447 76.989 76.748 77.393 -7.6294E-06 116 41 4 0 0 0 0.0087515 1 40437 52.403 47.437 1 0.72482 0.63865 0 1879600 1112500 767070 40530 922;1257;1659;1869;682 15281 15694 63587 63587 531 YMFSRPFR 8 0 2 Oxidation (M) _YM(ox)FSRPFR_ YM(1)FSRPFR YM(53.17)FSRPFR 0 1 1 Q6IAX2;P46778;G3V1B3;M0R181;M0R3I5 Q6IAX2 Q6IAX2 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 373.8516 3 373.851655 1118.53313 98727.08 0.25767 9.633E-05 -0.10273 -3.8405E-05 0.15494 5.7925E-05 373.851473398024 380.523734517911 46.604 0.39378 46.604 46.353 46.746 3.8147E-06 116 32 6 0 0 0 0.0071632 1 25171 53.166 49.595 1 1.5112 1.6414 0 34033000 15137000 18897000 40531 1571 15282 15695 63588 63588 1352 YMIVDEGHR 9 0 1 Oxidation (M) _YM(ox)IVDEGHR_ YM(1)IVDEGHR YM(50.04)IVDEGHR 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;B4E0F1;B4DSI8;P51531;A0A0U1RQZ9;F6VDE0;B4DK35;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 568.2637 2 568.263673 1134.51279 80348.27 0.72904 0.00041429 0.43462 0.00024698 1.1637 0.00066127 568.263838901474 573.267761945068 24.912 0.39583 24.912 24.616 25.012 0 59 17 5 0 0 0 0.01002 2 10622 50.04 45.133 1 1.0602 1.0766 0 20353000 9209000 11144000 40532 695;1595 15283 15696 63589;63590 63590 542 YMPQNPCIIATK 12 1 0 Oxidation (M) _YM(ox)PQNPCIIATK_ YM(1)PQNPCIIATK YM(65.28)PQNPCIIATK 0 1 0 Q09028 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.3617 2 726.354705 1450.69486 70891.43 0.70209 0.00050997 -0.92943 -0.0006751 -0.22735 -0.00016513 726.353981771014 730.361534160407 55.683 0.4894 55.683 55.548 56.038 0 187 34 9 0 0 0 0.0003989 1 31282 65.278 59.497 1 0.90893 1.0174 0 64082000 35367000 28715000 40533 1695 15284 15697 63591 63591 1528 YMPQNPCIIATK 12 1 0 Oxidation (M) _YM(ox)PQNPCIIATK_ YM(1)PQNPCIIATK YM(49.3)PQNPCIIATK 0 1 0 Q09028 Q09028 Q09028 RBBP4 Histone-binding protein RBBP4 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 726.3532 2 726.354705 1450.69486 NaN NaN NaN -1.0405 -0.00075575 NaN NaN NaN NaN 54.864 0.69317 54.864 54.559 55.252 0 0 0 0 0.0078649 2 31512 49.3 40.768 1 NaN NaN 0 15053000 15053000 0 40534 1695 15284 15697 63592;63593 63593 1528 YMPQNPHIIATK 12 1 0 Oxidation (M) _YM(ox)PQNPHIIATK_ YM(1)PQNPHIIATK YM(56.49)PQNPHIIATK 0 1 0 Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 479.5867 3 476.914983 1427.72312 86600.06 0.31656 0.00015097 0.19582 9.3389E-05 0.51238 0.00024436 476.915184474382 479.586477287138 34.761 0.42508 34.761 34.563 34.988 0 207 35 9 0 0 0 0.00082627 2 17635 56.493 52.529 1 1.1526 1.3007 0 127390000 56019000 71375000 40535 1771 15285 15698 63594;63595 63595 1643 YMPQNPHIIATK 12 1 0 Oxidation (M) _YM(ox)PQNPHIIATK_ YM(1)PQNPHIIATK YM(68.84)PQNPHIIATK 0 1 0 Q6FHQ0;Q16576;E9PC52;A8K6A2;Q5JP01 Q6FHQ0 Q6FHQ0 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.8776 2 714.868837 1427.72312 73099.48 0.87208 0.00062342 0.62008 0.00044327 1.4922 0.0010667 714.868780428223 718.875865862451 34.745 0.33788 34.745 34.589 34.927 0 121 28 6 0 0 0 0.00028252 2 17600 68.836 68.836 1 1.1205 1.2449 0 50036000 21114000 28922000 40536 1771 15285 15698 63596;63597 63597 1643 YMSPEQISSQDYGK 14 1 0 Oxidation (M) _YM(ox)SPEQISSQDYGK_ YM(1)SPEQISSQDYGK YM(56.2)SPEQISSQDYGK 0 1 0 Q8IW76;B7ZKK7;P19525 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.8692 2 824.861602 1647.70865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.534 1 43.534 43.034 44.034 3.8147E-06 0 0 0 0.0020303 1 23287 56.205 43.589 1 40537 1111 15286 15699 63598 63598 847 YMSPEQISSQDYGK 14 1 0 Oxidation (M) _YM(ox)SPEQISSQDYGK_ YM(1)SPEQISSQDYGK YM(44.3)SPEQISSQDYGK 0 1 0 Q8IW76;B7ZKK7;P19525 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 828.8696 2 824.861602 1647.70865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.613 1 43.613 43.113 44.113 0 0 0 0 0.0098658 1 23342 44.299 33.47 1 40538 1111 15286 15699 63599 63599 847 YMSPEQISSQDYGK 14 1 0 Oxidation (M) _YM(ox)SPEQISSQDYGK_ YM(1)SPEQISSQDYGK YM(87)SPEQISSQDYGK 0 1 0 Q8IW76;B7ZKK7;P19525 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 828.8686 2 824.861602 1647.70865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.672 1 42.672 42.172 43.172 0 0 0 0 0.00014109 1 23049 87.001 77.568 1 40539 1111 15286 15699 63600 63600 847 YMTLNPSTK 9 1 0 Oxidation (M) _YM(ox)TLNPSTK_ YM(1)TLNPSTK YM(107.57)TLNPSTK 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 539.7701 2 535.762975 1069.5114 NaN NaN NaN -0.46161 -0.00024732 NaN NaN NaN NaN 27.286 0.38411 27.286 27.083 27.467 1.9073E-06 0 0 0 9.3548E-06 1 12484 107.57 87.054 1 NaN NaN 0 22116000 0 22116000 40540 2103 15287 15700 63601 63601 1935 YMVENHGEDYK 11 1 0 Oxidation (M) _YM(ox)VENHGEDYK_ YM(1)VENHGEDYK YM(70.03)VENHGEDYK 0 1 0 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 705.303 2 700.792992 1399.57143 73675.88 0.48786 0.00034189 0.32104 0.00022498 0.8089 0.00056687 700.79319751372 704.800116124208 19.862 0.27414 19.862 19.692 19.966 0 39 11 6 0 0 0 0.00053698 2 6277 70.028 70.028 1 1.7418 1.7258 0 9484000 3278600 6205500 40541 2135 15288 15701 63602;63603 63602 1969 YMVENHGEDYK 11 1 0 Oxidation (M) _YM(ox)VENHGEDYK_ YM(1)VENHGEDYK YM(81.8)VENHGEDYK 0 1 0 Q9Y3C1;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9P0T8 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.7991 2 700.792992 1399.57143 72667.66 0.1457 0.00010211 -0.16557 -0.00011603 -0.019866 -1.3922E-05 700.793071746984 704.800147404417 19.717 0.40133 19.717 19.441 19.842 0 77 18 7 0 0 0 0.0001918 2 6074 81.799 81.799 1 1.4506 1.4812 0 9300800 3152700 6148100 40542 2135 15288 15701 63604;63605 63605 1969 YNACILEYK 9 1 0 Unmodified _YNACILEYK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;F5H2L3;F5GWI0;F5GZY8;F5GYG8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 587.2852 2 587.284074 1172.5536 NaN NaN NaN 0.77879 0.00045737 NaN NaN NaN NaN 69.049 0.45297 69.049 68.885 69.338 0 0 0 0 0.0035889 1 40058 78.149 61.185 1 NaN NaN 0 19346000 19346000 0 40543 1770 15289 15702 63606 63606 YNACILEYK 9 1 0 Unmodified _YNACILEYK_ 0 0 0 Q16531;B4DSA8;F5GY55;B7Z2A1;F5H2L3;F5GWI0;F5GZY8;F5GYG8 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 587.2854 2 587.284074 1172.5536 79621.14 0.55342 0.00032501 0.92241 0.00054172 1.4758 0.00086673 587.284371188258 591.794017305321 67.802 0.54737 67.802 67.64 68.188 0 141 47 5 0 0 0 0.0012677 1 40189 87.639 74.603 1 0.51443 0.51938 0 28434000 19697000 8737200 40544 1770 15289 15702 63607 63607 YNEFSVSLLNEDPK 14 1 0 Unmodified _YNEFSVSLLNEDPK_ 0 0 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 831.9089 2 827.901585 1653.78862 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.59 1 100.59 100.09 101.09 0 0 0 0 0.0022846 1 61681 64.64 46.372 1 40545 897 15290 15703 63608 63608 YNEFSVSLLNEDPK 14 1 0 Unmodified _YNEFSVSLLNEDPK_ 0 0 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 827.8995 2 827.901585 1653.78862 NaN NaN NaN 0.49891 0.00041305 NaN NaN NaN NaN 100.28 0.747 100.28 99.796 100.54 0 0 0 0 0.00014695 2 62678 87.363 80.979 1 NaN NaN 0 50933000 50933000 0 40546 897 15290 15703 63609;63610 63609 YNEFSVSLLNEDPK 14 1 0 Unmodified _YNEFSVSLLNEDPK_ 0 0 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 827.9023 2 827.901585 1653.78862 66755.59 1.0974 0.00090855 -0.042751 -3.5394E-05 1.0547 0.00087316 828.402620538751 831.908725001648 113.24 0.81155 113.24 112.93 113.74 -7.6294E-06 243 39 9 0 0 0 9.9732E-05 2 65839 85.288 85.288 1 1.2368 1.0082 0 32018000 15041000 16977000 40547 897 15290 15703 63611;63612 63612 YNEFSVSLLNEDPK 14 1 0 Unmodified _YNEFSVSLLNEDPK_ 0 0 0 B2RWN5;Q9H583;A0A024R3R7;A2VDI1;B4E263;B7ZAU8 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 827.9034 2 827.901585 1653.78862 67502.8 0.784 0.00064908 0.094017 7.7837E-05 0.87802 0.00072691 827.901727039982 831.908848507141 113.14 0.77883 113.14 112.85 113.63 0 232 38 9 0 0 0 0.00011138 2 64862 83.314 83.314 1 1.2587 1.031 0 27044000 11014000 16029000 40548 897 15290 15703 63613;63614 63614 YNEQHVPGSPFTAR 14 0 1 Unmodified _YNEQHVPGSPFTAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 534.9272 3 534.926828 1601.75865 83601.54 0.53923 0.00028845 0.081973 4.385E-05 0.6212 0.0003323 535.261383099588 538.2628890763 47.622 0.50603 47.622 47.398 47.904 0 174 44 6 0 0 0 0.012521 1 25813 28.11 25.683 1 1.2595 1.2769 0 28594000 13530000 15064000 40549 1504 15291 15704 63615 63615 YNEQHVPGSPFTAR 14 0 1 Unmodified _YNEQHVPGSPFTAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 806.8926 2 801.886604 1601.75865 NaN NaN NaN -0.27502 -0.00022054 NaN NaN NaN NaN 47.576 0.086006 47.576 47.53 47.616 0 0 0 0 0.014516 1 25837 49.025 36.447 1 NaN NaN 0 3953700 0 3953700 40550 1504 15291 15704 63616 63616 YNEQHVPGSPFTAR 14 0 1 Unmodified _YNEQHVPGSPFTAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61 P21333 P21333 FLNA;FLJ00119 Filamin-A MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.8884 2 801.886604 1601.75865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.6 1 47.6 47.1 48.1 -3.8147E-06 0 0 0 0.0020295 1 25840 67.153 50.128 1 40551 1504 15291 15704 63617 63617 YNEQHVPGSPFTAR 14 0 1 Unmodified _YNEQHVPGSPFTAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.9274 3 534.926828 1601.75865 NaN NaN NaN -0.35589 -0.00019038 NaN NaN NaN NaN 46.105 0.48977 46.105 45.892 46.382 0 0 0 0 0.024175 1 25322 35.329 30.781 1 NaN NaN 0 12717000 12717000 0 40552 1504 15291 15704 63618 63618 YNEQHVPGSPFTAR 14 0 1 Unmodified _YNEQHVPGSPFTAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61 P21333 P21333 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 538.2634 3 534.926828 1601.75865 NaN NaN NaN 1.4254 0.00076249 NaN NaN NaN NaN 46.113 0.74823 46.113 45.685 46.433 3.8147E-06 0 0 0 0.0030427 1 25366 52.008 41.655 1 NaN NaN 0 18671000 0 18671000 40553 1504 15291 15704 63619 63619 YNEQHVPGSPFTAR 14 0 1 Unmodified _YNEQHVPGSPFTAR_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3;Q8TES4;Q6NXF2;Q96C61 P21333 P21333 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 538.2633 3 534.926828 1601.75865 85219.82 0.43957 0.00023514 0.0813 4.349E-05 0.52087 0.00027863 535.261166002154 538.263090762791 55.483 0.67493 55.483 55.278 55.952 0 137 38 6 0 0 0 0.055154 1 27184 16.494 16.494 1 4.101 3.6292 0 2419500 547220 1872200 40554 1504 15291 15704 63620 63620 YNFLPEALDFVGVHQER 17 0 1 Unmodified _YNFLPEALDFVGVHQER_ 0 0 0 Q5SRE5;Q9BS12 Q5SRE5 Q5SRE5 NUP188 Nucleoporin NUP188 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 678.6752 3 678.674168 2033.00068 75773.52 0.96128 0.0006524 0.045888 3.1143E-05 1.0072 0.00068354 679.008607586729 682.010100639608 131.34 0.24353 131.34 131.26 131.5 0 32 10 4 0 0 0 0.011302 2 78827 23.226 19.988 1 1.1156 0.97031 0 1550100 704110 845990 40555 1816 15292 15705 63621;63622 63622 YNFPLVTLYATLGK 14 1 0 Unmodified _YNFPLVTLYATLGK_ 0 0 0 Q8TAF6;O60488;B4DH39;D6RF95 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.4078 2 800.442692 1598.87083 72363.14 1.3283 0.0010632 -0.40243 -0.00032212 0.92585 0.00074109 800.943830540059 804.449246296448 131.18 0.69481 131.18 130.82 131.51 0 152 46 5 0 0 0 0.00010051 1 85662 72.652 72.652 1 1.5669 1.5788 0 7164600 3092400 4072100 40556 1394 15293 15706 63623 63623 YNFPLVTLYATLGK 14 1 0 Unmodified _YNFPLVTLYATLGK_ 0 0 0 Q8TAF6;O60488;B4DH39;D6RF95 Q8TAF6 Q8TAF6 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 800.4421 2 800.442692 1598.87083 69258.69 0.97655 0.00078167 -0.52709 -0.00042191 0.44945 0.00035976 800.944408437409 804.449527475305 130.67 0.8622 130.67 130.18 131.04 0 282 58 7 0 0 0 0.0037659 1 87516 46.592 42.076 1 1.5813 1.6545 0 10409000 3836900 6572200 40557 1394 15293 15706 63624 63624 YNFPNPNPFVEDDMDK 16 1 0 Oxidation (M) _YNFPNPNPFVEDDM(ox)DK_ YNFPNPNPFVEDDM(1)DK YNFPNPNPFVEDDM(42.84)DK 0 1 0 O15371;B4E1K8 O15371 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 983.9267 2 979.417273 1956.81999 NaN NaN NaN -0.27925 -0.0002735 NaN NaN NaN NaN 100.87 0.43818 100.87 100.67 101.11 7.6294E-06 0 0 0 0.0045814 1 61961 42.843 39.521 1 NaN NaN 0 4302100 0 4302100 40558 1378 15294 15707 63625 63625 1041 YNFPVEVEVPMER 13 0 1 Oxidation (M) _YNFPVEVEVPM(ox)ER_ YNFPVEVEVPM(1)ER YNFPVEVEVPM(53.57)ER 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.3902 2 812.887423 1623.76029 NaN NaN NaN -0.1147 -9.3238E-05 NaN NaN NaN NaN 101.64 0.55664 101.64 101.33 101.89 0 0 0 0 0.0028617 1 64172 53.569 46.44 1 NaN NaN 0 9524300 9524300 0 40559 1665 15295 15708 63626 63626 1468 YNFPVEVEVPMER 13 0 1 Oxidation (M) _YNFPVEVEVPM(ox)ER_ YNFPVEVEVPM(1)ER YNFPVEVEVPM(48)ER 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 813.3896 2 812.887423 1623.76029 69073.09 1.001 0.00081369 -0.21136 -0.00017181 0.78962 0.00064187 813.389022128026 818.392610951051 114.29 0.41732 114.29 114.1 114.51 7.6294E-06 83 17 7 0 0 0 0.0023432 1 66707 48.004 44.781 1 0.23821 0.20364 0 5843300 4649100 1194200 40560 1665 15295 15708 63627 63627 1468 YNFPVEVEVPMER 13 0 1 Oxidation (M) _YNFPVEVEVPM(ox)ER_ YNFPVEVEVPM(1)ER YNFPVEVEVPM(47.29)ER 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 812.8878 2 812.887423 1623.76029 69345.49 0.73388 0.00059657 -0.57087 -0.00046405 0.16302 0.00013252 812.887495680807 818.394006656813 114.15 0.89134 114.15 113.85 114.74 7.6294E-06 125 37 8 0 0 0 0.0026504 1 65808 47.288 47.288 1 0.24013 0.19985 0 6180600 4949100 1231500 40561 1665 15295 15708 63628 63628 1468 YNGEPEHIER 10 0 1 Unmodified _YNGEPEHIER_ 0 0 0 Q14739;A0A024R3R5;C9JXK0 Q14739 Q14739 LBR Lamin-B receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 418.5302 3 415.194915 1242.56291 96167.11 -0.29041 -0.00012058 -0.4796 -0.00019913 -0.77001 -0.0003197 415.19481751865 418.530591603239 19.76 0.19317 19.76 19.671 19.865 0 33 7 6 0 0 0 0.0061045 2 6134 40.589 31.185 1 1.3647 1.3415 0 14288000 6147900 8139900 40562 1743 15296 15709 63629;63630 63630 YNGEPEHIER 10 0 1 Unmodified _YNGEPEHIER_ 0 0 0 Q14739;A0A024R3R5;C9JXK0 Q14739 Q14739 LBR Lamin-B receptor MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.2913 2 622.288734 1242.56291 78512.82 -0.0051833 -3.2255E-06 -0.082304 -5.1217E-05 -0.087487 -5.4442E-05 622.288610217326 627.292729275773 19.772 0.19317 19.772 19.671 19.865 0 29 7 6 0 0 0 0.0010168 1 6142 77.533 77.533 1 1.272 1.2752 0 18014000 7099900 10914000 40563 1743 15296 15709 63631 63631 YNGLIHR 7 0 1 Unmodified _YNGLIHR_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 436.7401 2 436.740494 871.466435 91479.46 -0.087845 -3.8366E-05 0.052211 2.2803E-05 -0.035634 -1.5563E-05 436.740557650933 441.744603199754 23.778 0.991 23.778 23.429 24.42 0 239 46 11 0 0 0 0.0085438 2 9593 127.66 109.89 1 0.83028 0.98384 0 483340000 247540000 235800000 40564 1572 15297 15710 63632;63633 63632 YNGLIHR 7 0 1 Unmodified _YNGLIHR_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 436.7404 2 436.740494 871.466435 90474.28 -0.13893 -6.0676E-05 -0.13585 -5.9332E-05 -0.27478 -0.00012001 436.74043702725 441.744412322575 23.331 1.1432 23.331 22.843 23.987 0 179 47 10 0 0 0 0.01007 2 9151 118.42 95.969 1 0.94547 1.1012 0 442480000 236040000 206450000 40565 1572 15297 15710 63634;63635 63634 YNGLIHR 7 0 1 Unmodified _YNGLIHR_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 441.7446 2 436.740494 871.466435 90384.05 -0.26767 -0.0001169 0.26858 0.0001173 0.00091382 3.991E-07 436.740581329243 441.74460902773 25.667 0.78893 25.667 25.474 26.263 0 133 31 8 0 0 0 0.026804 2 9393 79.454 61.687 1 0.88146 0.74329 0 28627000 15088000 13539000 40566 1572 15297 15710 63636;63637 63636 YNGLIHR 7 0 1 Unmodified _YNGLIHR_ 0 0 0 P46779;H0YKD8;H0YLP6;H0YMF4;Q59F34 P46779 P46779 RPL28 60S ribosomal protein L28 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 436.7402 2 436.740494 871.466435 89779.66 0.043909 1.9177E-05 -0.21445 -9.3658E-05 -0.17054 -7.4481E-05 436.740407569194 441.744366233829 25.592 1.0107 25.592 25.382 26.392 0 150 42 9 0 0 0 0.026788 2 8850 78.994 61.227 1 0.94065 0.82055 0 26903000 14133000 12769000 40567 1572 15297 15710 63638;63639 63639 YNHMLSATVK 10 1 0 Oxidation (M) _YNHM(ox)LSATVK_ YNHM(1)LSATVK YNHM(51.44)LSATVK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 594.3013 2 590.294973 1178.57539 77415.2 0.57682 0.00034049 0.35539 0.00020978 0.93221 0.00055028 590.294265786341 594.301770653257 22.513 0.50505 22.513 22.263 22.768 0 183 32 9 0 0 0 0.0057403 1 8546 51.436 47.502 1 1.2151 1.3092 0 41051000 19416000 21634000 40568 908 15298 15711 63640 63640 749 YNHMLSATVK 10 1 0 Oxidation (M) _YNHM(ox)LSATVK_ YNHM(1)LSATVK YNHM(131.52)LSATVK 0 1 0 B3KMS0;Q15021;B3KY03;B4E0B7;E7EN77;Q6ZV00;A0PJ76 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.3018 2 590.294973 1178.57539 78079.48 0.42197 0.00024909 -0.6362 -0.00037555 -0.21423 -0.00012646 590.294788891715 594.301808756829 22.099 0.39429 22.099 21.915 22.309 0 97 17 9 0 0 0 7.3374E-10 2 8109 131.52 107.72 1 1.3624 1.5221 0 89203000 38735000 50468000 40569 908 15298 15711 63641;63642 63641 749 YNILGTNTIMDK 12 1 0 Oxidation (M) _YNILGTNTIM(ox)DK_ YNILGTNTIM(1)DK YNILGTNTIM(113.93)DK 0 1 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 703.858 2 699.850309 1397.68607 71512.39 0.70554 0.00049377 -0.11707 -8.1931E-05 0.58847 0.00041184 699.850401293856 703.857403613561 75.88 0.9512 75.88 75.418 76.369 0 409 80 7 0 0 0 2.4682E-08 2 44437 113.93 113.93 1 2.0098 2.2768 0 98759000 30579000 68179000 40570 999 15299 15712 63643;63644 63643 793 YNILGTNTIMDK 12 1 0 Oxidation (M) _YNILGTNTIM(ox)DK_ YNILGTNTIM(1)DK YNILGTNTIM(67.7)DK 0 1 0 B4DLR3;Q00839;Q96BA7;B3KX72;Q7Z4Q5 B4DLR3 B4DLR3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.8577 2 699.850309 1397.68607 71408.84 0.6079 0.00042544 0.044166 3.0909E-05 0.65207 0.00045635 699.850203913437 703.857385652886 74.734 0.98256 74.734 74.291 75.274 0 438 86 6 0 0 0 0.00031955 1 44945 67.704 67.704 1 2.0008 2.2585 0 128030000 39154000 88878000 40571 999 15299 15712 63645 63645 793 YNIPHGPVVGSTR 13 0 1 Unmodified _YNIPHGPVVGSTR_ 0 0 0 P50402 P50402 P50402 EMD Emerin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 703.8757 2 698.870225 1395.7259 NaN NaN NaN -0.82625 -0.00057744 NaN NaN NaN NaN 51.062 0.4293 51.062 50.839 51.268 0 0 0 0 0.0078619 1 28805 54.259 40.141 1 NaN NaN 0 14089000 0 14089000 40572 1590 15300 15713 63646 63646 YNIPHGPVVGSTR 13 0 1 Unmodified _YNIPHGPVVGSTR_ 0 0 0 P50402 P50402 P50402 EMD Emerin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 469.5857 3 466.249242 1395.7259 87737.55 0.21512 0.0001003 -0.23451 -0.00010934 -0.019394 -9.0422E-06 466.583508023217 469.585255712495 61.293 0.66516 61.293 60.951 61.616 0 237 53 6 0 0 0 0.021854 2 31305 17.546 15.306 1 0.73256 0.62938 0 6417700 3801100 2616600 40573 1590 15300 15713 63647;63648 63648 YNIPHGPVVGSTR 13 0 1 Unmodified _YNIPHGPVVGSTR_ 0 0 0 P50402 P50402 P50402 EMD Emerin MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 469.5852 3 466.249242 1395.7259 88835.61 0.10393 4.8459E-05 -0.19198 -8.951E-05 -0.088045 -4.1051E-05 466.249147780997 469.585275542114 61.803 0.64973 61.803 61.439 62.088 3.8147E-06 245 48 6 0 0 0 0.030187 1 30904 17.069 15.594 1 0.71315 0.60515 0 4642700 2516700 2126000 40574 1590 15300 15713 63649 63649 YNLDASEEEDSNK 13 1 0 Unmodified _YNLDASEEEDSNK_ 0 0 0 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 761.3256 2 757.318082 1512.62161 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.346 1 32.346 31.846 32.846 0 0 0 0 0.021259 1 16085 46.73 39.876 1 40575 1420 15301 15714 63650 63650 YNLDASEEEDSNK 13 1 0 Unmodified _YNLDASEEEDSNK_ 0 0 0 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 757.317 2 757.318082 1512.62161 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.526 1 32.526 32.026 33.026 0 0 0 0 1.8315E-06 1 16185 101.39 95.089 1 40576 1420 15301 15714 63651 63651 YNLDASEEEDSNK 13 1 0 Unmodified _YNLDASEEEDSNK_ 0 0 0 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 761.3259 2 757.318082 1512.62161 70715.08 0.56668 0.00042916 0.0068957 5.2222E-06 0.57357 0.00043438 757.31809662161 761.325315096305 38.472 0.44856 38.472 38.22 38.668 0 114 29 5 0 0 0 0.014205 1 17420 37.426 37.426 1 0.56298 0.44517 0 3044200 1998700 1045500 40577 1420 15301 15714 63652 63652 YNLDASEEEDSNK 13 1 0 Unmodified _YNLDASEEEDSNK_ 0 0 0 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 757.319 2 757.318082 1512.62161 70564.91 0.34528 0.00026149 0.49834 0.0003774 0.84362 0.00063889 757.318896996563 761.325094739227 38.73 0.42037 38.73 38.512 38.932 0 119 32 5 0 0 0 0.013004 3 17055 38.783 38.783 1 0.54148 0.43933 0 2824500 1552700 1271800 40578 1420 15301 15714 63653;63654;63655 63653 YNLEELYQAVENLCSHK 17 1 0 Unmodified _YNLEELYQAVENLCSHK_ 0 0 0 Q13619;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 704.3361 3 704.001845 2108.9837 73420.63 0.82793 0.00058287 -0.38283 -0.00026951 0.44511 0.00031336 704.336043369754 707.007318869578 124.02 0.4642 124.02 123.82 124.28 -7.6294E-06 156 31 8 0 0 0 0.0040734 1 80425 29.687 29.687 1 0.71544 0.71883 0 7412000 3750400 3661600 40579 1718 15302 15715 63656 63656 YNLEELYQAVENLCSHK 17 1 0 Unmodified _YNLEELYQAVENLCSHK_ 0 0 0 Q13619;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 704.0027 3 704.001845 2108.9837 73910.05 0.81436 0.00057331 -0.022495 -1.5836E-05 0.79186 0.00055747 704.336280559389 706.673183811807 123.63 0.65475 123.63 123.39 124.04 0 245 46 9 0 0 0 0.0039363 1 82040 29.973 23.537 1 0.75322 0.75678 0 13648000 8238300 5409900 40580 1718 15302 15715 63657 63657 YNLEELYQAVENLCSHK 17 1 0 Unmodified _YNLEELYQAVENLCSHK_ 0 0 0 Q13619;A0A087WWN2 Q13619 Q13619 CUL4A Cullin-4A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 704.3369 3 704.001845 2108.9837 73244.64 0.61252 0.00043122 -0.06226 -4.3831E-05 0.55026 0.00038739 704.336460069723 706.673079740614 134.46 0.14117 134.46 134.39 134.53 0 18 4 6 0 0 0 0.029549 1 81260 19.057 19.057 1 1.0003 0.80514 0 22769000 11983000 10786000 40581 1718 15302 15715 63658 63658 YNLSAGTIK 9 1 0 Unmodified _YNLSAGTIK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.7672 2 483.766374 965.518196 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.969 1 48.969 48.469 49.469 0 0 0 0 0.0037472 1 26797 69.716 41.229 1 40582 1849 15303 15716 63659 63659 YNLSAGTIK 9 1 0 Unmodified _YNLSAGTIK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 483.7663 2 483.766374 965.518196 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.013 1 49.013 48.513 49.513 0 0 0 0 0.012923 1 26828 60.828 41.468 1 40583 1849 15303 15716 63660 63660 YNLSAGTIK 9 1 0 Unmodified _YNLSAGTIK_ 0 0 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 487.7733 2 483.766374 965.518196 88880.22 0.4006 0.0001938 -0.31765 -0.00015367 0.082944 4.0126E-05 483.76625957361 487.773258608274 57.067 0.40061 57.067 56.86 57.261 -3.8147E-06 98 25 5 0 0 0 0.023107 1 28206 48.794 33.643 1 1.3187 1.0688 0 2707300 1250400 1456900 40584 1849 15303 15716 63661 63661 YNLSQPSEAPPLAVHDEAEK 20 1 0 Unmodified _YNLSQPSEAPPLAVHDEAEK_ 0 0 0 P22670 P22670 P22670 RFX1 MHC class II regulatory factor RFX1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 732.6927 3 732.358685 2194.05423 73091.13 0.75187 0.00055064 -0.44551 -0.00032627 0.30636 0.00022436 732.358465432332 735.363584495241 70.841 0.59535 70.841 70.554 71.149 0 142 46 5 0 0 0 3.8567E-05 1 41176 42.348 42.348 1 0.56635 0.60014 0 16186000 8758700 7427600 40585 1509 15304 15717 63662 63662 YNLSQPSEAPPLAVHDEAEK 20 1 0 Unmodified _YNLSQPSEAPPLAVHDEAEK_ 0 0 0 P22670 P22670 P22670 RFX1 MHC class II regulatory factor RFX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 735.3643 3 732.358685 2194.05423 71446.66 0.56365 0.0004128 -0.12051 -8.8258E-05 0.44314 0.00032454 732.693202868045 735.363658709608 81.146 0.40686 81.146 80.956 81.363 0 152 25 8 0 0 0 0.00075174 1 43968 24.679 24.679 1 1.0441 0.82359 0 4074900 2115800 1959100 40586 1509 15304 15717 63663 63663 YNLSQPSEAPPLAVHDEAEK 20 1 0 Unmodified _YNLSQPSEAPPLAVHDEAEK_ 0 0 0 P22670 P22670 P22670 RFX1 MHC class II regulatory factor RFX1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 735.3643 3 732.358685 2194.05423 72493.31 0.70768 0.00051828 -0.43085 -0.00031554 0.27683 0.00020274 732.692895128281 735.364075816346 81.262 0.37089 81.262 81.081 81.452 0 121 21 9 0 0 0 0.021786 1 43223 10.151 10.151 1 1.1834 0.93584 0 3947400 1976200 1971100 40587 1509 15304 15717 63664 63664 YNPTWHCIVGR 11 0 1 Unmodified _YNPTWHCIVGR_ 0 0 0 Q6FGH9;Q96FJ2;P63167 Q6FGH9 Q6FGH9 DNCL1;DYNLL2;DYNLL1 Dynein light chain 2, cytoplasmic;Dynein light chain 1, cytoplasmic MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 467.903 3 468.227673 1401.66119 90812.12 0.099875 4.6764E-05 -1.3885 -0.00065016 -1.2887 -0.00060339 468.227749997271 471.563871237056 57.317 0.62397 57.317 56.953 57.577 -3.8147E-06 160 48 6 0 0 0 0.052521 1 33239 36.303 32.982 1 1.0365 1.0452 0 6252000 3286700 2965300 40588 1654 15305 15718 63665 63665 YNSSSISSVLK 11 1 0 Unmodified _YNSSSISSVLK_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 592.8118 2 592.81151 1183.60847 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.05 1 66.05 65.55 66.55 0 0 0 0 0.00030074 1 38081 78.655 61.984 1 40589 1593 15306 15719 63666 63666 YNVGDLVWSK 10 1 0 Unmodified _YNVGDLVWSK_ 0 0 0 O96028;Q05CW4;D6R9V2 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.8101 2 590.803488 1179.59242 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.68 1 91.68 91.18 92.18 0 0 0 0 0.0011053 1 56774 69.275 47.039 1 40590 1435 15307 15720 63667 63667 YNVGDLVWSK 10 1 0 Unmodified _YNVGDLVWSK_ 0 0 0 O96028;Q05CW4;D6R9V2 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.8102 2 590.803488 1179.59242 81025.98 0.59764 0.00035309 0.44725 0.00026424 1.0449 0.00061733 590.803598079064 594.810394015318 105.65 0.70951 105.65 105.46 106.17 0 127 40 5 0 0 0 0.049297 1 60216 43.77 25.784 1 1.9895 1.5487 0 3357800 1129300 2228500 40591 1435 15307 15720 63668 63668 YNVPLNR 7 0 1 Unmodified _YNVPLNR_ 0 0 0 F8VQE1;B4DN52;Q53GG0;Q9UHB6;F8VRN8 F8VQE1 F8VQE1 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 443.2443 2 438.240327 874.466101 90646.11 0.26622 0.00011667 -0.1878 -8.2303E-05 0.078415 3.4365E-05 438.240381464728 443.244330058874 40.438 0.31835 40.438 40.176 40.494 0 111 26 5 0 0 0 0.030002 1 21492 69.432 54.211 1 2.2754 2.5955 0 95447000 25851000 69596000 40592 1010 15308 15721 63669 63669 YNVSTTPYLQSVK 13 1 0 Unmodified _YNVSTTPYLQSVK_ 0 0 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 754.3975 2 750.390656 1498.76676 69047.01 0.40484 0.00030379 -1.6827 -0.0012627 -1.2778 -0.00095887 750.389320255863 754.396121357711 88.409 0.92972 88.409 87.989 88.919 0 288 54 10 0 0 0 1.475E-06 2 47886 110.84 101.52 1 1.2801 1.033 0 23341000 9674200 13667000 40593 895 15309 15722 63670;63671 63670 YPASTVQILGAEK 13 1 0 Unmodified _YPASTVQILGAEK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.8817 2 688.874642 1375.73473 73034.38 0.47214 0.00032525 0.20188 0.00013907 0.67402 0.00046432 688.874772794659 692.88181098366 76.884 1.0067 76.884 76.529 77.536 0 458 86 7 0 0 0 4.3907E-31 2 45287 174.77 156.02 1 0.78403 0.91285 0 260090000 149310000 110790000 40594 785 15310 15723 63672;63673 63673 YPASTVQILGAEK 13 1 0 Unmodified _YPASTVQILGAEK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 692.8818 2 688.874642 1375.73473 73705.29 0.46107 0.00031762 0.069298 4.7738E-05 0.53037 0.00036536 688.874718126067 692.881724448401 75.909 0.9389 75.909 75.514 76.452 0 520 84 10 0 0 0 2.0572E-23 2 45600 151.79 134.31 1 0.73298 0.86295 0 447670000 258660000 189000000 40595 785 15310 15723 63674;63675 63675 YPASTVQILGAEK 13 1 0 Unmodified _YPASTVQILGAEK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.8752 2 688.874642 1375.73473 72916.65 0.57158 0.00039375 -0.070765 -4.8748E-05 0.50082 0.000345 688.874668321986 692.881625268132 88.028 1.4709 88.028 87.589 89.06 0 545 93 11 0 0 0 0.0010854 2 48789 59.265 53.263 1 0.97962 0.84641 0 108820000 55700000 53116000 40596 785 15310 15723 63676;63677 63677 YPASTVQILGAEK 13 1 0 Unmodified _YPASTVQILGAEK_ 0 0 0 A8K9K6;O00567;A0PJ92;H0YDU4;H0Y653 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 692.882 2 688.874642 1375.73473 73219.13 0.48154 0.00033172 0.042611 2.9354E-05 0.52415 0.00036107 688.874754756646 692.881720341813 88.049 1.471 88.049 87.589 89.06 0 502 88 10 0 0 0 7.3664E-05 3 47479 94.767 82.191 1 0.96238 0.82091 0 95802000 48786000 47016000 40597 785 15310 15723 63678;63679;63680 63678 YPDISDSISTER 12 0 1 Unmodified _YPDISDSISTER_ 0 0 0 B9EGR5;Q8IWI9;H3BP52;H3BTF4 B9EGR5 B9EGR5 MGA MAX gene-associated protein MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 691.8255 2 691.825346 1381.63614 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.652 1 67.652 67.152 68.152 0 0 0 0 0.051478 1 39134 42.336 30.846 1 40598 1121 15311 15724 63681 63681 YPEAQSVASDILR 13 0 1 Unmodified _YPEAQSVASDILR_ 0 0 0 B4DKK3;B7Z9W6;Q59EH7;Q99615;K7EPP7;K7ESP1;A8K4T2;K7EIH8 B4DKK3 B4DKK3 DNAJC7 DnaJ homolog subfamily C member 7 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 724.8741 2 724.87263 1447.73071 NaN NaN NaN -0.8424 -0.00061063 NaN NaN NaN NaN 89.981 0.40401 89.981 89.786 90.19 0 0 0 0 0.047207 1 54253 40.449 19.001 1 NaN NaN 0 13675000 13675000 0 40599 990 15312 15725 63682 63682 YPEAQSVASDILR 13 0 1 Unmodified _YPEAQSVASDILR_ 0 0 0 B4DKK3;B7Z9W6;Q59EH7;Q99615;K7EPP7;K7ESP1;A8K4T2;K7EIH8 B4DKK3 B4DKK3 DNAJC7 DnaJ homolog subfamily C member 7 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 724.8756 2 724.87263 1447.73071 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.554 1 88.554 88.054 89.054 0 0 0 0 0.051849 1 54616 41.218 5.5532 1 40600 990 15312 15725 63683 63683 YPEETLSLMTK 11 1 0 Oxidation (M) _YPEETLSLM(ox)TK_ YPEETLSLM(1)TK YPEETLSLM(64.37)TK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 668.8646 2 664.326136 1326.63772 75603.74 0.66444 0.0004414 0.039933 2.6528E-05 0.70437 0.00046793 664.32690147692 668.33303330832 66.015 0.83245 66.015 65.553 66.385 0 137 75 5 0 0 0 0.023018 1 37967 64.374 64.374 1 1.2655 1.2838 0 13428000 4674200 8753300 40601 1665 15313 15726 63684 63684 1469 YPEETLSLMTK 11 1 0 Oxidation (M) _YPEETLSLM(ox)TK_ YPEETLSLM(1)TK YPEETLSLM(50.11)TK 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.3272 2 664.326136 1326.63772 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.279 1 65.279 64.779 65.779 0 0 0 0 0.012631 1 38500 50.108 33.331 1 40602 1665 15313 15726 63685 63685 1469 YPEETLSLMTK 11 1 0 Unmodified _YPEETLSLMTK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 656.3268 2 656.328679 1310.6428 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.928 1 94.928 94.428 95.428 0 0 0 0 0.023877 1 53148 51.765 33.325 1 40603 1665 15313 15727 63686 63686 YPENFFLLR 9 0 1 Unmodified _YPENFFLLR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 599.8173 2 599.816399 1197.61824 78579.3 0.9351 0.00056089 0.0022215 1.3325E-06 0.93732 0.00056222 599.816306262648 604.820419098975 110.99 0.95074 110.99 110.64 111.59 7.6294E-06 393 64 10 0 0 0 1.1813E-05 3 69724 125.25 106.81 1 1.2051 1.4175 0 231230000 103790000 127430000 40604 1632;343;1633 15314 15728 63687;63688;63689 63688 YPENFFLLR 9 0 1 Unmodified _YPENFFLLR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 599.8165 2 599.816399 1197.61824 78952.73 0.68516 0.00041097 0.13084 7.8481E-05 0.816 0.00048945 599.816341804477 604.820491573843 110.27 0.93979 110.27 109.82 110.76 -7.6294E-06 419 63 11 0 0 0 3.6058E-06 3 70890 134.15 116.52 1 1.243 1.4328 0 228270000 94409000 133860000 40605 1632;343;1633 15314 15728 63690;63691;63692 63692 YPENFFLLR 9 0 1 Unmodified _YPENFFLLR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 599.8168 2 599.816399 1197.61824 78243.58 0.7748 0.00046474 0.078554 4.7118E-05 0.85335 0.00051185 599.816463979712 604.820498777926 121.88 1.5238 121.88 121.58 123.11 0 356 76 10 0 0 0 0.00050627 2 72498 98.299 90.374 1 2.2475 1.9396 0 83108000 25661000 57447000 40606 1632;343;1633 15314 15728 63693;63694 63694 YPENFFLLR 9 0 1 Unmodified _YPENFFLLR_ 0 0 0 P62136;A0A140VJS9;B3KXM2;E9PMD7;A0A024RBP2;P36873;Q9UPN1;F8VYE8;F8W0W8;F8VR82;A0A087WYY5;V9HW04;P62140;B4DJ75;B7ZB67;E7ETD8;C9J9S3;C9JP48;B4E163 P62136;A0A024RBP2;V9HW04 P62136 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 604.8214 2 599.816399 1197.61824 78542.7 0.8442 0.00050636 0.091213 5.4711E-05 0.93541 0.00056107 599.816469176334 604.820502638305 121.67 1.2649 121.67 121.34 122.61 0 333 64 10 0 0 0 0.00054206 2 71396 97.798 88.615 1 2.183 1.9051 0 74344000 23555000 50789000 40607 1632;343;1633 15314 15728 63695;63696 63695 YPEPSGALPGDDLSSR 16 0 1 Unmodified _YPEPSGALPGDDLSSR_ 0 0 0 P31276 P31276 P31276 HOXC13 Homeobox protein Hox-C13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 830.8936 2 830.894291 1659.77403 67007.55 0.47178 0.000392 -0.46924 -0.00038989 0.0025387 2.1094E-06 830.893643283433 835.898400399081 74.841 0.4373 74.841 74.667 75.105 0 90 36 4 0 0 0 1.5964E-08 2 43910 123.64 123.64 1 0.38169 0.3974 0 13436000 8469200 4967000 40608 1534 15315 15729 63697;63698 63698 YPEPSGALPGDDLSSR 16 0 1 Unmodified _YPEPSGALPGDDLSSR_ 0 0 0 P31276 P31276 P31276 HOXC13 Homeobox protein Hox-C13 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 830.8953 2 830.894291 1659.77403 66984.84 0.72358 0.00060122 -0.32986 -0.00027408 0.39372 0.00032714 830.893756415991 836.399625832735 73.904 0.42228 73.904 73.657 74.079 0 97 32 4 0 0 0 2.1292E-07 2 44368 111.12 111.12 1 0.30241 0.30584 0 19924000 14997000 4927200 40609 1534 15315 15729 63699;63700 63700 YPEPSGALPGDDLSSR 16 0 1 Unmodified _YPEPSGALPGDDLSSR_ 0 0 0 P31276 P31276 P31276 HOXC13 Homeobox protein Hox-C13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 835.8984 2 830.894291 1659.77403 68658.76 0.57452 0.00047737 -0.10718 -8.9057E-05 0.46734 0.00038831 830.894082058277 835.898458785166 85.53 0.39687 85.53 85.326 85.723 0 113 24 6 0 0 0 0.047031 1 46758 23.092 23.092 1 0.73247 0.62631 0 2762100 1731000 1031100 40610 1534 15315 15729 63701 63701 YPEPSGALPGDDLSSR 16 0 1 Unmodified _YPEPSGALPGDDLSSR_ 0 0 0 P31276 P31276 P31276 HOXC13 Homeobox protein Hox-C13 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 835.8996 2 830.894291 1659.77403 67465.11 0.70258 0.00058377 -0.55293 -0.00045943 0.14965 0.00012435 831.395481612729 835.898618934585 85.749 0.82565 85.749 85.498 86.324 0 147 45 7 0 0 0 0.0012325 2 46100 46.069 46.069 1 0.68433 0.60415 0 2446700 1499900 946820 40611 1534 15315 15729 63702;63703 63703 YPHLQVIGGNVVTAAQAK 18 1 0 Unmodified _YPHLQVIGGNVVTAAQAK_ 0 0 0 B4DNJ7;B3KRZ3;Q6ZNB1;Q5H9Q6;P20839;A0A024R725;C9J381 B4DNJ7 B4DNJ7 IMPDH;DKFZp781N0678;IMPDH1 Inosine-5-monophosphate dehydrogenase;Inosine-5-monophosphate dehydrogenase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 625.3519 3 622.679254 1865.01593 84441 0.456 0.00028394 1.1773 0.00073306 1.6333 0.001017 622.680180233051 625.351197923793 82.644 0.46759 82.644 82.374 82.841 0 131 38 6 0 0 0 0.00013234 1 50595 45.221 41.252 1 1.5655 1.5923 0 16858000 6094400 10764000 40612 935 15316 15730 63704 63704 YPHLQVIGGNVVTAAQAK 18 1 0 Unmodified _YPHLQVIGGNVVTAAQAK_ 0 0 0 B4DNJ7;B3KRZ3;Q6ZNB1;Q5H9Q6;P20839;A0A024R725;C9J381 B4DNJ7 B4DNJ7 IMPDH;DKFZp781N0678;IMPDH1 Inosine-5-monophosphate dehydrogenase;Inosine-5-monophosphate dehydrogenase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 622.68 3 622.679254 1865.01593 84878.38 0.44025 0.00027413 0.96614 0.0006016 1.4064 0.00087573 623.014014228672 625.685239487909 82.838 0.21892 82.838 82.781 83 0 32 16 4 0 0 0 0.00092236 1 50722 35.304 29.987 1 1.3925 1.4035 0 7485800 3898600 3587200 40613 935 15316 15730 63705 63705 YPIEHGIITNWDDMEK 16 1 0 Oxidation (M) _YPIEHGIITNWDDM(ox)EK_ YPIEHGIITNWDDM(1)EK YPIEHGIITNWDDM(98.51)EK 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B7Z6P1 B7Z6P1 ACTA2;ACTG2;ACTA1;ACTC1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.9751 3 659.640136 1975.89858 73633.53 0.74992 0.00049468 -0.22189 -0.00014637 0.52803 0.00034831 659.974526186471 662.311578295654 75.932 1.7731 75.932 75.472 77.245 0 1144 150 13 0 0 0 1.2909E-07 5 44597 98.507 98.507 1 2.1568 2.5779 0 814330000 256790000 557550000 40614 1100 15317 15731 63706;63707;63708;63709;63710 63707 843 YPIEHGIITNWDDMEK 16 1 0 Oxidation (M) _YPIEHGIITNWDDM(ox)EK_ YPIEHGIITNWDDM(1)EK YPIEHGIITNWDDM(77.56)EK 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B7Z6P1 B7Z6P1 ACTA2;ACTG2;ACTA1;ACTC1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.3124 3 659.640136 1975.89858 73502.63 0.63993 0.00042212 -0.38214 -0.00025207 0.25779 0.00017005 659.974484138261 662.311516436555 74.586 1.9827 74.586 74.044 76.027 0 1124 177 13 0 0 0 3.1186E-05 3 45454 77.562 77.044 1 2.1452 2.5372 0 1776200000 571640000 1204600000 40615 1100 15317 15731 63711;63712;63713 63713 843 YPIEHGIITNWDDMEK 16 1 0 Oxidation (M) _YPIEHGIITNWDDM(ox)EK_ YPIEHGIITNWDDM(1)EK YPIEHGIITNWDDM(43.66)EK 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B7Z6P1 B7Z6P1 ACTA2;ACTG2;ACTA1;ACTC1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.6459 3 659.640136 1975.89858 73163.82 0.57135 0.00037689 -0.051317 -3.3851E-05 0.52004 0.00034304 659.974614508754 662.311680501385 86.568 1.9441 86.568 86.214 88.158 0 633 120 12 0 0 0 0.00045472 2 47429 43.657 43.657 1 1.7908 1.5437 0 98284000 35103000 63181000 40616 1100 15317 15731 63714;63715 63715 843 YPIEHGIITNWDDMEK 16 1 0 Oxidation (M) _YPIEHGIITNWDDM(ox)EK_ YPIEHGIITNWDDM(1)EK YPIEHGIITNWDDM(59.51)EK 0 1 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B7Z6P1 B7Z6P1 ACTA2;ACTG2;ACTA1;ACTC1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.6407 3 659.640136 1975.89858 73591.82 0.59326 0.00039134 -0.077433 -5.1078E-05 0.51582 0.00034026 659.974601924515 662.31164480308 86.551 1.392 86.551 86.271 87.663 0 569 85 11 0 0 0 5.268E-05 2 46594 59.513 56.278 1 1.8085 1.5394 0 83729000 29454000 54275000 40617 1100 15317 15731 63716;63717 63716 843 YPIEHGIITNWDDMEK 16 1 0 Unmodified _YPIEHGIITNWDDMEK_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B7Z6P1 B7Z6P1 ACTA2;ACTG2;ACTA1;ACTC1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 654.6979 3 654.308498 1959.90366 80660.79 0.69344 0.00045372 -0.80657 -0.00052775 -0.11314 -7.4027E-05 654.30872364271 657.312896306419 87.836 0.57553 87.836 87.535 88.11 0 143 55 4 0 0 0 0.00071572 2 52954 28.166 24.325 1 1.0249 1.0038 0 22154000 11671000 10483000 40618 1100 15317 15732 63718;63719 63719 YPIEHGIITNWDDMEK 16 1 0 Unmodified _YPIEHGIITNWDDMEK_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B7Z6P1 B7Z6P1 ACTA2;ACTG2;ACTA1;ACTC1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 654.6428 3 654.308498 1959.90366 79314.56 0.58434 0.00038234 -0.64593 -0.00042264 -0.061586 -4.0297E-05 654.642734385397 656.979318175704 86.532 0.63522 86.532 86.215 86.85 0 145 55 4 0 0 0 0.00010683 3 53246 44.299 44.299 1 1.241 1.2637 0 30665000 12596000 18069000 40619 1100 15317 15732 63720;63721;63722 63721 YPIEHGIITNWDDMEK 16 1 0 Unmodified _YPIEHGIITNWDDMEK_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B7Z6P1 B7Z6P1 ACTA2;ACTG2;ACTA1;ACTC1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.3148 3 654.308498 1959.90366 74035.47 0.67161 0.00043944 -0.34871 -0.00022816 0.3229 0.00021128 654.642623350876 656.979698465981 99.797 0.77688 99.797 99.437 100.21 0 287 54 9 0 0 0 0.00048714 1 56328 44.567 44.567 1 2.6984 2.1969 0 31161000 7855100 23306000 40620 1100 15317 15732 63723 63723 YPIEHGIITNWDDMEK 16 1 0 Unmodified _YPIEHGIITNWDDMEK_ 0 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B7Z6P1 B7Z6P1 ACTA2;ACTG2;ACTA1;ACTC1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 657.3143 3 654.308498 1959.90366 74158.14 0.53282 0.00034863 -0.249 -0.00016292 0.28382 0.0001857 654.308598571969 656.979778113083 99.586 0.61731 99.586 99.293 99.91 0 350 51 9 0 0 0 0.00048714 2 55374 44.567 44.567 1 2.5285 2.049 0 24332000 6324200 18008000 40621 1100 15317 15732 63724;63725 63724 YPIPPPDAK 9 1 0 Unmodified _YPIPPPDAK_ 0 0 0 B4DFY5;A4QPA9;Q02750;H3BRW9;B3KS97;P36507;Q7Z370;G5E9C7;A0A1B0GUL7 B4DFY5;P36507 P36507 MAP2K1;MAP2K2;DKFZp686L02273 Dual specificity mitogen-activated protein kinase kinase 1;Dual specificity mitogen-activated protein kinase kinase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.278 2 499.271293 996.528032 85365.46 0.41242 0.00020591 1.1749 0.00058661 1.5874 0.00079252 499.773578386647 503.278665838838 48.526 0.65108 48.526 48.231 48.882 0 150 43 6 0 0 0 0.0066845 2 26383 63.565 34.227 1 1.0688 1.0757 0 27110000 14743000 12368000 40622 1547;674 15318 15733 63726;63727 63726 YPLFEGQETGK 11 1 0 Unmodified _YPLFEGQETGK_ 0 0 0 A0A090N8G0;P41250 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 638.8188 2 634.81151 1267.60847 NaN NaN NaN -1.5991 -0.0010151 NaN NaN NaN NaN 60.203 0.31656 60.203 60.05 60.367 3.8147E-06 0 0 0 0.0027751 1 34376 71.349 48.52 1 NaN NaN 0 9158400 0 9158400 40623 457 15319 15734 63728 63728 YPLFEGQETGK 11 1 0 Unmodified _YPLFEGQETGK_ 0 0 0 A0A090N8G0;P41250 A0A090N8G0 A0A090N8G0 GARS Glycine--tRNA ligase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 638.8182 2 634.81151 1267.60847 NaN NaN NaN -1.4117 -0.00089615 NaN NaN NaN NaN 58.999 0.34762 58.999 58.819 59.166 0 0 0 0 2.5051E-08 1 34316 114.86 86.46 1 NaN NaN 0 10838000 0 10838000 40624 457 15319 15734 63729 63729 YPLLLQSIGQNTEEPTER 18 0 1 Unmodified _YPLLLQSIGQNTEEPTER_ 0 0 0 Q49AN3;M0R2C7;M0QYC1;A0A024R0R1;M0QZR4;Q92888 Q49AN3 Q49AN3 ARHGEF1 Rho guanine nucleotide exchange factor 1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1045.0364 2 1044.53403 2087.0535 NaN NaN NaN -1.4336 -0.0014975 NaN NaN NaN NaN 104.92 0.25932 104.92 104.71 104.97 0 0 0 0 0.0080972 1 66453 42.095 22.086 1 NaN NaN 0 3842600 3842600 0 40625 55 15320 15735 63730 63730 YPLLLQSIGQNTEEPTER 18 0 1 Unmodified _YPLLLQSIGQNTEEPTER_ 0 0 0 Q49AN3;M0R2C7;M0QYC1;A0A024R0R1;M0QZR4;Q92888 Q49AN3 Q49AN3 ARHGEF1 Rho guanine nucleotide exchange factor 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1049.5403 2 1044.53403 2087.0535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.84 1 104.84 104.34 105.34 0 0 0 0 0.0016107 1 66487 55.452 50.068 1 40626 55 15320 15735 63731 63731 YPLPVFSTFVLTGSSAK 17 1 0 Unmodified _YPLPVFSTFVLTGSSAK_ 0 0 0 R4GMN2;R4GNB2;R4GN35;Q5VZ89 R4GMN2 R4GMN2 DENND4C DENN domain-containing protein 4C MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 911.5004 2 907.49037 1812.96619 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.49 1 128.49 127.99 128.99 0 0 0 0 0.00055256 1 85891 59.227 21.506 1 40627 1834 15321 15736 63732 63732 YPLTVFESR 9 0 1 Unmodified _YPLTVFESR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.2964 2 556.292756 1110.57096 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.485 1 83.485 82.985 83.985 -7.6294E-06 0 0 0 0.006942 1 49982 66.621 41.699 1 40628 1435 15322 15737 63733 63733 YPLTVFESR 9 0 1 Unmodified _YPLTVFESR_ 0 0 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.2958 2 556.292756 1110.57096 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.435 1 82.435 81.935 82.935 0 0 0 0 0.043105 1 50458 48.794 27.494 1 40629 1435 15322 15737 63734 63734 YPMAVGLNK 9 1 0 Oxidation (M) _YPM(ox)AVGLNK_ YPM(1)AVGLNK YPM(96.51)AVGLNK 0 1 0 Q9Y3U8;J3QSB5;J3KTD3 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.7705 2 504.762778 1007.511 84233.95 0.49596 0.00025034 0.093866 4.738E-05 0.58982 0.00029772 504.762812745122 508.769875071645 41.032 0.60961 41.032 40.631 41.24 0 359 51 11 0 0 0 0.00030719 3 21644 96.51 68.404 1 1.1414 1.2938 0 156570000 83785000 72789000 40630 2140 15323 15738 63735;63736;63737 63737 1981 YPMAVGLNK 9 1 0 Oxidation (M) _YPM(ox)AVGLNK_ YPM(1)AVGLNK YPM(73.97)AVGLNK 0 1 0 Q9Y3U8;J3QSB5;J3KTD3 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 508.7697 2 504.762778 1007.511 85111.3 0.62362 0.00031478 0.24336 0.00012284 0.86699 0.00043762 504.762706926962 508.770140553673 41.484 0.87821 41.484 41.198 42.076 0 232 71 6 0 0 0 0.0012493 1 21882 73.975 57.42 1 0.62106 0.70022 0 129380000 64424000 64961000 40631 2140 15323 15738 63738 63738 1981 YPMAVGLNK 9 1 0 Oxidation (M) _YPM(ox)AVGLNK_ YPM(1)AVGLNK YPM(100.75)AVGLNK 0 1 0 Q9Y3U8;J3QSB5;J3KTD3 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.7707 2 504.762778 1007.511 84942.3 0.65828 0.00033227 -0.1139 -5.749E-05 0.54438 0.00027478 504.762725674427 508.769863755101 39.838 0.93054 39.838 39.331 40.261 0 386 80 8 0 0 0 0.00017496 2 21016 100.75 81.268 1 1.0017 1.147 0 162580000 89780000 72799000 40632 2140 15323 15738 63739;63740 63740 1981 YPMAVGLNK 9 1 0 Oxidation (M) _YPM(ox)AVGLNK_ YPM(1)AVGLNK YPM(146.01)AVGLNK 0 1 0 Q9Y3U8;J3QSB5;J3KTD3 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 508.7709 2 504.762778 1007.511 NaN NaN NaN 1.2855 0.00064886 NaN NaN NaN NaN 40.492 0.62034 40.492 40.319 40.939 0 0 0 0 3.4707E-17 1 21619 146.01 110.37 1 NaN NaN 0 82912000 0 82912000 40633 2140 15323 15738 63741 63741 1981 YPMAVGLNK 9 1 0 Oxidation (M) _YPM(ox)AVGLNK_ YPM(1)AVGLNK YPM(79.15)AVGLNK 0 1 0 Q9Y3U8;J3QSB5;J3KTD3 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 504.7631 2 504.762778 1007.511 NaN NaN NaN -0.37282 -0.00018819 NaN NaN NaN NaN 47.669 0.81986 47.669 47.161 47.981 0 0 0 0 0.00096663 1 23154 79.146 62.182 1 NaN NaN 0 4108900 4108900 0 40634 2140 15323 15738 63742 63742 1981 YPMAVGLNK 9 1 0 Oxidation (M) _YPM(ox)AVGLNK_ YPM(1)AVGLNK YPM(68.7)AVGLNK 0 1 0 Q9Y3U8;J3QSB5;J3KTD3 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 504.7629 2 504.762778 1007.511 85952.31 -0.0036776 -1.8563E-06 0.73581 0.00037141 0.73214 0.00036956 504.762874867386 508.770499039109 47.903 0.92852 47.903 47.361 48.29 0 223 74 4 0 0 0 0.0022572 1 22704 68.7 46.772 1 0.544 0.4442 0 4709000 2798000 1911100 40635 2140 15323 15738 63743 63743 1981 YPMAVGLNK 9 1 0 Unmodified _YPMAVGLNK_ 0 0 0 Q9Y3U8;J3QSB5;J3KTD3 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 500.7728 2 496.76532 991.516088 90579.13 0.2263 0.00011242 0.33914 0.00016847 0.56544 0.00028089 496.765296387134 500.772650936065 68.081 0.79401 68.081 67.62 68.414 0 123 53 4 0 0 0 0.055399 1 35535 36.57 28.879 1 0.7766 0.62859 0 2752000 1197000 1555000 40636 2140 15323 15739 63744 63744 YPNIELSYEVVDK 13 1 0 Unmodified _YPNIELSYEVVDK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 784.8932 2 784.895771 1567.77699 70228.36 0.53016 0.00041612 0.68688 0.00053913 1.217 0.00095525 785.396223857659 788.903145698135 99.697 0.60703 99.697 99.401 100.01 -7.6294E-06 300 50 9 0 0 0 0.0029569 2 60981 65.842 56.187 1 1.073 1.15 0 32548000 14407000 18141000 40637 1411 15324 15740 63745;63746 63746 YPNIELSYEVVDK 13 1 0 Unmodified _YPNIELSYEVVDK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 784.8965 2 784.895771 1567.77699 NaN NaN NaN -1.4703 -0.001154 NaN NaN NaN NaN 99.104 0.52409 99.104 98.791 99.315 7.6294E-06 0 0 0 0.0055307 1 61949 57.348 39.037 1 NaN NaN 0 24399000 24399000 0 40638 1411 15324 15740 63747 63747 YPNIELSYEVVDK 13 1 0 Unmodified _YPNIELSYEVVDK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 788.9026 2 784.895771 1567.77699 NaN NaN NaN -0.0061938 -4.8615E-06 NaN NaN NaN NaN 99.079 0.55943 99.079 98.767 99.326 -7.6294E-06 0 0 0 9.6111E-22 1 61987 142.83 134.25 1 NaN NaN 0 24881000 0 24881000 40639 1411 15324 15740 63748 63748 YPNIELSYEVVDK 13 1 0 Unmodified _YPNIELSYEVVDK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 784.8938 2 784.895771 1567.77699 68875.98 0.92479 0.00072587 0.44004 0.00034539 1.3648 0.0010713 784.894220822426 788.90279994929 112.35 0.44437 112.35 112.13 112.58 0 146 24 9 0 0 0 0.0021789 2 65251 68.676 60.187 1 1.0654 0.85025 0 6898800 3037700 3861100 40640 1411 15324 15740 63749;63750 63750 YPNIELSYEVVDK 13 1 0 Unmodified _YPNIELSYEVVDK_ 0 0 0 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;B4E0P5;Q7L5W4;Q9P172 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 784.8938 2 784.895771 1567.77699 68110.07 0.69552 0.00054591 -0.19361 -0.00015196 0.50192 0.00039395 785.395471609571 788.902947789222 112.27 0.45198 112.27 111.99 112.44 0 125 23 8 0 0 0 0.0033634 2 64320 63.473 57.471 1 1.2054 0.98361 0 6248000 2716700 3531200 40641 1411 15324 15740 63751;63752 63752 YPNLQVIGGNVVTAAQAK 18 1 0 Unmodified _YPNLQVIGGNVVTAAQAK_ 0 0 0 H0Y4R1;P12268;B7Z1G4 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 922.509 2 922.00725 1841.99995 64017.06 0.47869 0.00044135 -0.014496 -1.3365E-05 0.46419 0.00042799 922.508711580138 926.014455439051 102.76 0.86811 102.76 102.3 103.17 0 513 73 10 0 0 0 3.5909E-51 2 63137 173.19 173.19 1 1.2329 1.3878 0 118240000 53007000 65237000 40642 1282 15325 15741 63753;63754 63754 YPNLQVIGGNVVTAAQAK 18 1 0 Unmodified _YPNLQVIGGNVVTAAQAK_ 0 0 0 H0Y4R1;P12268;B7Z1G4 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 922.5097 2 922.00725 1841.99995 64346.69 0.50183 0.0004627 -0.082425 -7.5997E-05 0.41941 0.0003867 922.508496242486 926.014413840741 101.98 0.88172 101.98 101.68 102.56 7.6294E-06 461 67 10 0 0 0 5.1759E-08 2 64178 94.688 94.688 1 1.2012 1.3677 0 148450000 67130000 81321000 40643 1282 15325 15741 63755;63756 63756 YPNLQVIGGNVVTAAQAK 18 1 0 Unmodified _YPNLQVIGGNVVTAAQAK_ 0 0 0 H0Y4R1;P12268;B7Z1G4 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 922.5077 2 922.00725 1841.99995 63596.16 0.77531 0.00071484 -0.49835 -0.00045948 0.27696 0.00025536 922.508239769753 926.014399295184 114.86 0.65137 114.86 114.51 115.16 0 188 30 9 0 0 0 3.0684E-05 2 67137 65.895 65.895 1 1.1189 0.87021 0 15432000 6766700 8665600 40644 1282 15325 15741 63757;63758 63758 YPNLQVIGGNVVTAAQAK 18 1 0 Unmodified _YPNLQVIGGNVVTAAQAK_ 0 0 0 H0Y4R1;P12268;B7Z1G4 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 926.5145 2 922.00725 1841.99995 63982.48 0.54033 0.00049819 -0.59057 -0.00054451 -0.050237 -4.6319E-05 922.507912457969 926.014405459539 114.77 0.67496 114.77 114.4 115.07 -7.6294E-06 179 30 10 0 0 0 2.8544E-05 3 66097 67.275 67.275 1 0.96963 0.77742 0 19260000 9937800 9321900 40645 1282 15325 15741 63759;63760;63761 63760 YPPFPSDYLALQLPEPSPLRPK 22 1 1 Unmodified _YPPFPSDYLALQLPEPSPLRPK_ 0 0 1 Q8NBZ0;I3NI13;I3L270;I3L0W8 Q8NBZ0 Q8NBZ0 INO80E INO80 complex subunit E MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 842.7889 3 842.452809 2524.3366 65794.7 1.2843 0.001082 0.1588 0.00013378 1.4431 0.0012157 842.787403862782 848.794761005679 134.34 0.14264 134.34 134.26 134.41 0 41 6 9 0 0 0 0.021237 1 82020 20.439 20.439 1 1.1787 1.0171 0 12999000 5755000 7244000 40646 1921 15326 15742 63762 63762 YPPPTELLDLQPLPVSALR 19 0 1 Unmodified _YPPPTELLDLQPLPVSALR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1065.5986 2 1060.09352 2118.17249 59746.17 0.77155 0.00081791 0.094203 9.9864E-05 0.86575 0.00091778 1060.59487627324 1065.59933162853 133 0.47908 133 132.71 133.19 0 152 20 11 0 0 0 2.2616E-06 4 86869 84.297 84.297 1 0.91015 0.93123 0 35777000 17838000 17939000 40647 1411 15327 15743 63763;63764;63765;63766 63766 YPPPTELLDLQPLPVSALR 19 0 1 Unmodified _YPPPTELLDLQPLPVSALR_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1065.099 2 1060.09352 2118.17249 59837.56 0.85591 0.00090734 0.15083 0.0001599 1.0067 0.0010672 1060.59504010312 1065.59945550655 132.59 0.64143 132.59 132.29 132.93 0 256 36 9 0 0 0 4.5912E-23 2 88782 135.58 135.58 1 0.90753 1.0406 0 51590000 25937000 25653000 40648 1411 15327 15743 63767;63768 63768 YPSLELER 8 0 1 Unmodified _YPSLELER_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 503.7642 2 503.763832 1005.51311 84190.86 0.30003 0.00015114 0.25147 0.00012668 0.55151 0.00027783 503.763870918984 508.76803729607 69.027 0.99193 69.027 68.496 69.488 7.6294E-06 472 85 8 0 0 0 0.0013179 2 39921 110.12 82.013 1 0.77947 0.92224 0 319030000 190000000 129030000 40649 1817 15328 15744 63769;63770 63769 YPSLELER 8 0 1 Unmodified _YPSLELER_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 503.7637 2 503.763832 1005.51311 84273.38 0.21745 0.00010954 0.24792 0.00012489 0.46537 0.00023444 503.763868016587 508.768056848981 67.783 0.93497 67.783 67.282 68.217 0 433 78 9 0 0 0 1.88E-05 1 40081 142.36 112.99 1 0.74543 0.86427 0 307180000 174820000 132360000 40650 1817 15328 15744 63771 63771 YPSLELER 8 0 1 Unmodified _YPSLELER_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 508.768 2 503.763832 1005.51311 84363.11 0.3413 0.00017193 -0.032902 -1.6575E-05 0.30839 0.00015536 503.763803108931 508.767831286606 78.916 1.3582 78.916 78.478 79.836 0 419 83 10 0 0 0 0.033206 1 42261 50.127 41.354 1 0.88648 0.76289 0 53013000 28393000 24620000 40651 1817 15328 15744 63772 63772 YPSLELER 8 0 1 Unmodified _YPSLELER_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 503.7639 2 503.763832 1005.51311 84740.55 0.2462 0.00012402 0.15701 7.9098E-05 0.40321 0.00020312 503.763933570735 508.76789026077 79.172 1.1707 79.172 78.678 79.849 0 424 73 10 0 0 0 0.011008 2 41623 70.919 60.505 1 0.90237 0.78724 0 49007000 25863000 23145000 40652 1817 15328 15744 63773;63774 63774 YPSPFFVFGEK 11 1 0 Unmodified _YPSPFFVFGEK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 659.3291 2 659.329339 1316.64412 75678.34 0.89327 0.00058896 -0.18 -0.00011868 0.71327 0.00047028 659.329103619916 663.336257441425 116.31 0.99645 116.31 115.98 116.97 0 391 65 10 0 0 0 2.1018E-05 2 74103 104.52 98.26 1 1.3289 1.4971 0 124980000 51965000 73014000 40653 1691 15329 15745 63775;63776 63776 YPSPFFVFGEK 11 1 0 Unmodified _YPSPFFVFGEK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 663.3354 2 659.329339 1316.64412 74360.18 0.93434 0.00061604 -0.43102 -0.00028418 0.50332 0.00033186 659.328822524643 663.336134345173 115.73 0.98574 115.73 115.36 116.34 0 367 63 10 0 0 0 0.00035027 2 75325 85.377 79.416 1 1.3533 1.5434 0 152380000 60369000 92008000 40654 1691 15329 15745 63777;63778 63777 YPSPFFVFGEK 11 1 0 Unmodified _YPSPFFVFGEK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 659.3303 2 659.329339 1316.64412 73990.7 0.87492 0.00057686 0.007267 4.7913E-06 0.88219 0.00058165 659.329312193572 663.336434395351 127.7 0.86485 127.7 127.35 128.21 0 202 33 9 0 0 0 0.00035027 2 76944 85.377 82.645 1 1.5135 1.2142 0 21209000 8320000 12889000 40655 1691 15329 15745 63779;63780 63780 YPSPFFVFGEK 11 1 0 Unmodified _YPSPFFVFGEK_ 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 659.3312 2 659.329339 1316.64412 74250.77 0.73273 0.00048311 0.078017 5.1439E-05 0.81075 0.00053455 659.329500212111 663.336488101763 127.52 0.84342 127.52 127.12 127.96 0 236 34 10 0 0 0 0.00071156 3 75829 73.067 73.067 1 1.5348 1.2418 0 23963000 9654400 14309000 40656 1691 15329 15745 63781;63782;63783 63782 YPTFIDALR 9 0 1 Unmodified _YPTFIDALR_ 0 0 0 B5MCF9;B2RDF2;O00541 B5MCF9 B5MCF9 PES1 Pescadillo homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.2996 2 548.295299 1094.57605 83244.77 0.79328 0.00043495 0.15995 8.7702E-05 0.95323 0.00052265 548.295251843885 553.299406074197 103.15 0.80729 103.15 102.75 103.55 0 294 69 6 0 0 0 0.0049382 2 63665 67.993 60.061 1 0.8572 0.90702 0 41025000 21944000 19081000 40657 886 15330 15746 63784;63785 63785 YPTQSGKPPLLVSAPSK 17 2 0 Unmodified _YPTQSGKPPLLVSAPSK_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;A0A087WXU8;Q7Z4X3;B4DGI6 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.6655 3 590.664722 1768.97234 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.915 1 62.915 62.415 63.415 0 0 0 0 4.1907E-05 1 36128 65.107 52.48 1 40658 993 15331 15747 63786 63786 YPTQSGKPPLLVSAPSK 17 2 0 Unmodified _YPTQSGKPPLLVSAPSK_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;A0A087WXU8;Q7Z4X3;B4DGI6 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 596.3421 3 590.664722 1768.97234 78468.94 0.67311 0.00039758 0.085737 5.0642E-05 0.75885 0.00044822 590.999014021052 596.007636947257 61.686 0.5514 61.686 61.353 61.904 0 248 50 7 0 0 0 3.3229E-05 2 36059 68.481 68.481 1 0.75646 0.87439 0 32957000 20307000 12649000 40659 993 15331 15747 63787;63788 63788 YPTQSGKPPLLVSAPSK 17 2 0 Unmodified _YPTQSGKPPLLVSAPSK_ 0 0 1 B4DKV2;G3V529;Q9GZR7;F5GYL3;B4E300;A0A087WXU8;Q7Z4X3;B4DGI6 B4DKV2 B4DKV2 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 590.6644 3 590.664722 1768.97234 79346.88 0.38051 0.00022475 0.364 0.000215 0.74451 0.00043975 590.999269979763 596.007562077306 72.731 0.47563 72.731 72.513 72.988 0 189 40 6 0 0 0 0.041946 1 37598 19.42 17.295 1 0.89323 0.7646 0 4363300 2673500 1689800 40660 993 15331 15747 63789 63789 YQADITDLLK 10 1 0 Unmodified _YQADITDLLK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q86TR6 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 590.3176 2 590.316428 1178.6183 79300.38 0.93868 0.00055412 0.31349 0.00018506 1.2522 0.00073917 590.316907457298 594.825723962678 100.89 0.93233 100.89 100.28 101.21 -7.6294E-06 257 71 5 0 0 0 0.00021283 3 61849 93.649 82.289 1 1.0795 1.1621 0 38308000 16479000 21829000 40661 1223 15332 15748 63790;63791;63792 63791 YQADITDLLK 10 1 0 Unmodified _YQADITDLLK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q86TR6 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.8261 2 590.316428 1178.6183 78596.51 0.71993 0.00042498 -0.37443 -0.00022103 0.3455 0.00020395 590.316469024546 594.322934508846 100.05 0.74792 100.05 99.743 100.49 7.6294E-06 263 60 6 0 0 0 0.0030546 2 62712 66.273 54.755 1 0.82797 0.84627 0 25754000 13681000 12073000 40662 1223 15332 15748 63793;63794 63794 YQADITDLLK 10 1 0 Unmodified _YQADITDLLK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q86TR6 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.8275 2 590.316428 1178.6183 80922.08 0.89714 0.00052959 0.0021018 1.2407E-06 0.89924 0.00053083 590.316355219022 594.323165679516 113.12 0.97097 113.12 112.63 113.6 0 167 46 7 0 0 0 0.00023762 1 65823 92.838 75.598 1 1.9736 1.5848 0 7745600 2478800 5266800 40663 1223 15332 15748 63795 63795 YQADITDLLK 10 1 0 Unmodified _YQADITDLLK_ 0 0 0 E7ESY4;Q13330;A0A024R6P5;Q86TR6 E7ESY4 E7ESY4 MTA1 Metastasis-associated protein MTA1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.3235 2 590.316428 1178.6183 NaN NaN NaN 0.016733 9.8775E-06 NaN NaN NaN NaN 113.02 0.82011 113.02 112.75 113.57 7.6294E-06 0 0 0 0.003539 1 64844 76.17 23.003 1 NaN NaN 0 5344000 0 5344000 40664 1223 15332 15748 63796 63796 YQAECSQFK 9 1 0 Unmodified _YQAECSQFK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 580.7562 2 580.755681 1159.49681 79514.38 0.61772 0.00035875 -0.14544 -8.4466E-05 0.47228 0.00027428 580.755717483527 584.76227573797 25.314 0.27189 25.314 25.161 25.433 1.9073E-06 45 12 6 0 0 0 0.00025784 2 10923 104.44 104.44 1 0.42066 0.44362 0 16367000 11427000 4939800 40665 1486 15333 15749 63797;63798 63798 YQAECSQFK 9 1 0 Unmodified _YQAECSQFK_ 0 0 0 P15924;Q4LE79;B4E2A0;B4DKX6 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 580.7556 2 580.755681 1159.49681 79323.59 0.74211 0.00043099 0.16228 9.4243E-05 0.90439 0.00052523 580.7556181231 584.763019760662 25.086 0.28143 25.086 24.938 25.219 0 42 10 6 0 0 0 0.00055371 2 10730 97.635 94.628 1 0.50505 0.52864 0 19396000 12743000 6652300 40666 1486 15333 15749 63799;63800 63799 YQAEIPDR 8 0 1 Unmodified _YQAEIPDR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.2462 2 496.245806 990.47706 NaN NaN NaN 0.22134 0.00010984 NaN NaN NaN NaN 36.831 0.5983 36.831 36.56 37.158 3.8147E-06 0 0 0 2.5539E-05 1 18676 126.67 100.56 1 NaN NaN 0 49524000 49524000 0 40667 168 15334 15750 63801 63801 YQAEIPDR 8 0 1 Unmodified _YQAEIPDR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 496.2462 2 496.245806 990.47706 86788.05 0.20174 0.00010011 -0.082319 -4.085E-05 0.11943 5.9264E-05 496.245674973483 501.249856565858 42.318 0.88831 42.318 41.84 42.728 0 222 66 6 0 0 0 0.0070775 2 19730 84.498 71.509 1 1.7794 1.4953 0 9926700 3311300 6615400 40668 168 15334 15750 63802;63803 63803 YQAEIPDR 8 0 1 Unmodified _YQAEIPDR_ 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 501.2501 2 496.245806 990.47706 NaN NaN NaN 0.11762 5.8368E-05 NaN NaN NaN NaN 42.586 0.62174 42.586 42.256 42.878 0 0 0 0 0.025595 1 19299 61.962 43.927 1 NaN NaN 0 5694600 0 5694600 40669 168 15334 15750 63804 63804 YQAEIPDRLVEGESDNR 17 0 2 Unmodified _YQAEIPDRLVEGESDNR_ 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 670.9929 3 664.320342 1989.9392 74778.7 0.60352 0.00040093 0.11555 7.6765E-05 0.71907 0.00047769 664.654732135905 671.327052740649 78.288 0.40993 78.288 78.068 78.478 0 134 25 8 0 0 0 0.0093329 1 41103 25.198 15.793 1 1.7675 1.5993 0 4099200 1219800 2879400 40670 168 15335 15751 63805 63805 YQAPDIDVQLSSELTDSLR 19 0 1 Unmodified _YQAPDIDVQLSSELTDSLR_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DVK1;M0QZ34;M0QZU5;M0QYZ9;Q9P0B0;Q9H7J4 Q7L4X7 Q7L4X7 GLTSCR2;FLJ00085 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1080.5378 2 1075.53422 2149.05389 59453.12 0.30683 0.00033001 0.26809 0.00028834 0.57492 0.00061835 1075.53362304106 1081.04028848139 118.66 0.4813 118.66 118.43 118.91 7.6294E-06 130 29 8 0 0 0 8.7186E-12 4 78022 100.11 100.11 1 1.2897 1.3806 0 25062000 9892500 15169000 40671 1068 15336 15752 63806;63807;63808;63809 63807 YQAPDIDVQLSSELTDSLR 19 0 1 Unmodified _YQAPDIDVQLSSELTDSLR_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DVK1;M0QZ34;M0QZU5;M0QYZ9;Q9P0B0;Q9H7J4 Q7L4X7 Q7L4X7 GLTSCR2;FLJ00085 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1075.5325 2 1075.53422 2149.05389 59587.05 0.19027 0.00020464 0.36773 0.0003955 0.55799 0.00060014 1075.53388794657 1081.04022258934 131.59 0.49878 131.59 131.37 131.86 0 126 23 10 0 0 0 0.021673 1 79863 23.481 23.481 1 1.234 1.0616 0 6991600 2954300 4037300 40672 1068 15336 15752 63810 63810 YQAPDIDVQLSSELTDSLR 19 0 1 Unmodified _YQAPDIDVQLSSELTDSLR_ 0 0 0 Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5;B4DVK1;M0QZ34;M0QZU5;M0QYZ9;Q9P0B0;Q9H7J4 Q7L4X7 Q7L4X7 GLTSCR2;FLJ00085 Glioma tumor suppressor candidate region gene 2 protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1081.0394 2 1075.53422 2149.05389 58595.28 0.41292 0.0004441 0.10202 0.00010972 0.51493 0.00055383 1076.03657816291 1080.53775931299 131.44 0.33923 131.44 131.28 131.62 0 72 13 8 0 0 0 0.00054038 1 78856 39.163 33.986 1 1.1267 0.93562 0 5867300 2656800 3210500 40673 1068 15336 15752 63811 63811 YQAVTATLEEK 11 1 0 Unmodified _YQAVTATLEEK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 626.8251 2 626.824618 1251.63468 76331.45 0.68908 0.00043194 0.10785 6.7603E-05 0.79693 0.00049954 626.82468374637 630.83169988099 51.397 1.6443 51.397 50.866 52.51 0 775 140 9 0 0 0 1.13E-13 3 28442 150.08 140.74 1 0.88824 1.0626 0 861480000 456920000 404560000 40674 1558 15337 15753 63812;63813;63814 63813 YQAVTATLEEK 11 1 0 Unmodified _YQAVTATLEEK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 626.8253 2 626.824618 1251.63468 76756.01 0.67928 0.00042579 -0.14665 -9.1925E-05 0.53263 0.00033387 626.8246504574 630.831514287313 50.398 1.1846 50.398 49.572 50.756 0 662 104 9 0 0 0 2.2587E-08 4 28103 121.83 111.13 1 0.89098 1.0513 0 881190000 483840000 397340000 40675 1558 15337 15753 63815;63816;63817;63818 63815 YQAVTATLEEK 11 1 0 Unmodified _YQAVTATLEEK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 626.8251 2 626.824618 1251.63468 75808.1 0.40304 0.00025263 0.24048 0.00015074 0.64352 0.00040337 626.824787961742 630.831789487302 59.512 1.2191 59.512 59.08 60.299 0 560 87 10 0 0 0 8.4595E-06 1 30380 109.42 109.42 1 0.91382 0.78395 0 79779000 41433000 38346000 40676 1558 15337 15753 63819 63819 YQAVTATLEEK 11 1 0 Unmodified _YQAVTATLEEK_ 0 0 0 Q53H34;P40429;Q9BSQ6;Q5QTS3;M0QYS1;Q8J015;Q6NVV1 Q53H34 Q53H34 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 626.8247 2 626.824618 1251.63468 76115.2 0.49377 0.00030951 0.14871 9.3218E-05 0.64249 0.00040273 626.824804951233 630.831671746417 60.034 0.95543 60.034 59.579 60.534 -3.8147E-06 448 69 10 0 0 0 0.026688 2 29810 40.589 34.787 1 0.91088 0.77577 0 86698000 47057000 39641000 40677 1558 15337 15753 63820;63821 63820 YQDILVFR 8 0 1 Unmodified _YQDILVFR_ 0 0 0 P19623;K7EKM4 P19623 P19623 SRM Spermidine synthase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 532.2947 2 527.290017 1052.56548 89082.52 0.49669 0.0002619 0.13284 7.0045E-05 0.62953 0.00033195 527.28971958855 532.294575156258 92.518 0.38038 92.518 92.406 92.786 0 70 30 4 0 0 0 0.0092533 2 57365 75.109 59.477 1 1.1583 1.137 0 14085000 6904200 7180400 40678 1500 15338 15754 63822;63823 63823 YQEAQEEIMK 10 1 0 Oxidation (M) _YQEAQEEIM(ox)K_ YQEAQEEIM(1)K YQEAQEEIM(46.46)K 0 1 0 Q9P0K7;B4DNL3 Q9P0K7 Q9P0K7 RAI14 Ankycorbin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 646.7996 2 642.79246 1283.57037 NaN NaN NaN -0.15217 -9.7815E-05 NaN NaN NaN NaN 23.871 0.21698 23.871 23.77 23.987 0 0 0 0 0.015944 1 9723 46.462 39.771 1 NaN NaN 0 2802700 0 2802700 40679 2093 15339 15755 63824 63824 1922 YQELPNSGPPHDR 13 0 1 Unmodified _YQELPNSGPPHDR_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4;Q6PK38;F8WBH4;C9JZT2 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 760.361 2 755.357679 1508.7008 NaN NaN NaN NaN NaN NaN NaN NaN NaN 26.663 1 26.663 26.163 27.163 0 0 0 0 0.023433 1 12031 45.28 19.341 1 40680 1111 15340 15756 63825 63825 YQELPNSGPPHDR 13 0 1 Unmodified _YQELPNSGPPHDR_ 0 0 0 Q8IW76;B7ZKK7;P19525;Q05CP4;Q6PK38;F8WBH4;C9JZT2 Q8IW76 Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 760.3619 2 755.357679 1508.7008 74077.95 0.76797 0.00058009 0.21482 0.00016226 0.98279 0.00074235 755.357461561294 760.361822177172 26.208 0.16236 26.208 26.105 26.267 1.9073E-06 23 6 5 0 0 0 0.00013509 2 11686 84.718 79.777 1 1.9334 1.9526 0 10097000 3531800 6564900 40681 1111 15340 15756 63826;63827 63826 YQEQLVQEQELAK 13 1 0 Unmodified _YQEQLVQEQELAK_ 0 0 0 P42695;Q96FA6;E9PQA3 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 807.4182 2 803.409577 1604.8046 68372.5 0.75548 0.00060696 -0.04257 -3.4201E-05 0.71291 0.00057276 803.409792605906 807.416459529342 61.79 0.53725 61.79 61.51 62.047 0 221 42 7 0 0 0 2.8042E-13 3 35374 125.97 119.22 1 0.91644 0.98464 0 39162000 19048000 20114000 40682 1565 15341 15757 63828;63829;63830 63830 YQEQLVQEQELAK 13 1 0 Unmodified _YQEQLVQEQELAK_ 0 0 0 P42695;Q96FA6;E9PQA3 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 807.4159 2 803.409577 1604.8046 71542.27 0.26166 0.00021022 0.27464 0.00022065 0.5363 0.00043087 803.41000812739 807.416096987412 60.745 0.69653 60.745 60.295 60.991 0 218 53 6 0 0 0 5.9345E-06 3 35397 105.2 105.2 1 1.011 1.0782 0 20888000 10407000 10481000 40683 1565 15341 15757 63831;63832;63833 63832 YQEQLVQEQELAK 13 1 0 Unmodified _YQEQLVQEQELAK_ 0 0 0 P42695;Q96FA6;E9PQA3 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 807.4167 2 803.409577 1604.8046 68920.7 0.39517 0.00031749 0.12106 9.7261E-05 0.51623 0.00041475 803.410521364432 807.416394752869 71.844 0.59393 71.844 71.504 72.098 0 188 46 6 0 0 0 0.0016408 2 37894 57.003 51.852 1 1.9913 1.5835 0 6618700 2084400 4534200 40684 1565 15341 15757 63834;63835 63835 YQEQLVQEQELAK 13 1 0 Unmodified _YQEQLVQEQELAK_ 0 0 0 P42695;Q96FA6;E9PQA3 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 803.9112 2 803.409577 1604.8046 68063.92 0.26977 0.00021673 0.35187 0.00028269 0.62163 0.00049942 803.91159180445 807.416708315591 72.454 0.55844 72.454 72.129 72.688 0 185 49 5 0 0 0 0.00011731 2 37471 88.338 84.32 1 2.0754 1.7023 0 8906000 2933700 5972400 40685 1565 15341 15757 63836;63837 63837 YQFDAFYGER 10 0 1 Unmodified _YQFDAFYGER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 653.2927 2 648.288202 1294.56185 77625.7 0.9677 0.00062735 0.17916 0.00011614 1.1469 0.0007435 648.28839656133 653.292373271241 82.664 0.62322 82.664 82.326 82.95 0 260 50 6 0 0 0 0.00050835 1 49424 85.731 85.731 1 0.82856 0.84295 0 29753000 18538000 11215000 40686 1745 15342 15758 63838 63838 YQFDAFYGER 10 0 1 Unmodified _YQFDAFYGER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 648.2889 2 648.288202 1294.56185 76430.92 0.78319 0.00050773 0.21327 0.00013826 0.99646 0.00064599 648.288209629233 653.292453605703 94.336 0.69305 94.336 94.021 94.714 0 234 41 8 0 0 0 0.052251 1 52668 35.944 35.485 1 1.4837 1.2493 0 9783700 4242600 5541100 40687 1745 15342 15758 63839 63839 YQFDAFYGER 10 0 1 Unmodified _YQFDAFYGER_ 0 0 0 Q14807;A0A024R632;B7Z9T5;H3BRB3;H3BTH5 Q14807 Q14807 KIF22 Kinesin-like protein KIF22;Kinesin-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 653.2928 2 648.288202 1294.56185 75731.71 0.74827 0.00048509 0.33004 0.00021396 1.0783 0.00069905 648.288148735293 653.292517946047 94.343 0.68841 94.343 94.062 94.751 0 240 43 8 0 0 0 0.0010831 2 51861 76.465 76.465 1 1.4109 1.1465 0 9953600 3957800 5995900 40688 1745 15342 15758 63840;63841 63840 YQFLADSDTSLMLSLNHPLAPVR 23 0 1 Oxidation (M) _YQFLADSDTSLM(ox)LSLNHPLAPVR_ YQFLADSDTSLM(1)LSLNHPLAPVR YQFLADSDTSLM(97.49)LSLNHPLAPVR 0 1 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 872.4461 3 868.775734 2603.30537 64422.35 0.64457 0.00055999 -0.78039 -0.00067799 -0.13582 -0.000118 869.109977478303 872.444654851286 115.28 0.85571 115.28 114.78 115.64 0 267 55 9 0 0 0 5.0425E-13 2 73283 97.488 97.488 1 1.3898 1.4101 0 27965000 10516000 17449000 40689 897 15343 15759 63842;63843 63842 718 YQFLADSDTSLMLSLNHPLAPVR 23 0 1 Oxidation (M) _YQFLADSDTSLM(ox)LSLNHPLAPVR_ YQFLADSDTSLM(1)LSLNHPLAPVR YQFLADSDTSLM(85.25)LSLNHPLAPVR 0 1 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.1115 3 868.775734 2603.30537 64545.48 0.63946 0.00055555 -1.0536 -0.00091531 -0.4141 -0.00035976 869.110161523153 872.444767442408 114.7 0.87534 114.7 114.21 115.08 0 282 56 10 0 0 0 1.5636E-10 1 74632 85.248 85.248 1 1.4269 1.5572 0 29850000 12910000 16940000 40690 897 15343 15759 63844 63844 718 YQFLADSDTSLMLSLNHPLAPVR 23 0 1 Unmodified _YQFLADSDTSLMLSLNHPLAPVR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 866.7795 3 863.444096 2587.31046 65881.54 0.72017 0.00062183 -0.86257 -0.00074478 -0.1424 -0.00012295 864.112264435149 866.77911707754 133.44 0.40878 133.44 133.23 133.64 0 126 16 12 0 0 0 3.2803E-09 1 81277 68.88 68.88 1 1.4378 1.2268 0 8876200 3404900 5471200 40691 897 15343 15760 63845 63845 YQFLADSDTSLMLSLNHPLAPVR 23 0 1 Unmodified _YQFLADSDTSLMLSLNHPLAPVR_ 0 0 0 B2RWN5;Q9H583;Q5T3Q7 B2RWN5 B2RWN5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-SECPEP 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 866.7435 3 863.444096 2587.31046 65913.91 0.90488 0.00078131 -0.33137 -0.00028612 0.5735 0.00049519 863.77815299822 867.114229718428 133.19 0.39279 133.19 133.02 133.41 0 60 15 6 0 0 0 1.2336E-05 1 80121 52.061 52.061 1 1.1776 1.0164 0 3408600 1386900 2021700 40692 897 15343 15760 63846 63846 YQFLEEAFQNQK 12 1 0 Unmodified _YQFLEEAFQNQK_ 0 0 0 H0Y612;A0A024R0F6;Q9UPN9 H0Y612 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.3817 2 772.87263 1543.73071 NaN NaN NaN 0.63238 0.00048875 NaN NaN NaN NaN 99.514 0.42347 99.514 99.227 99.651 0 0 0 0 0.0012694 1 56264 79.986 0 1 NaN NaN 0 2259100 0 2259100 40693 45 15344 15761 63847 63847 YQFLEEAFQNQK 12 1 0 Unmodified _YQFLEEAFQNQK_ 0 0 0 H0Y612;A0A024R0F6;Q9UPN9 H0Y612 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 776.8792 2 772.87263 1543.73071 68215.37 0.68385 0.00052853 -0.26377 -0.00020386 0.42008 0.00032467 773.3730703794 776.879580210717 99.386 0.51344 99.386 99.108 99.622 0 110 35 7 0 0 0 0.017556 1 55317 41.399 0 1 0.59034 0.48345 0 4931200 2798300 2132900 40694 45 15344 15761 63848 63848 YQGVNLYIK 9 1 0 Unmodified _YQGVNLYIK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 553.311 2 549.303124 1096.5917 81727.45 0.76993 0.00042293 0.059971 3.2942E-05 0.82991 0.00045587 549.302665651741 553.310649990139 75.314 0.62672 75.314 74.942 75.568 0 234 50 6 0 0 0 0.004147 2 44120 69.998 53.796 1 1.6673 1.7976 0 37604000 14206000 23398000 40695 818 15345 15762 63849;63850 63849 YQGVNLYIK 9 1 0 Unmodified _YQGVNLYIK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.3121 2 549.303124 1096.5917 NaN NaN NaN 0.39371 0.00021627 NaN NaN NaN NaN 74.022 0.54686 74.022 73.722 74.269 0 0 0 0 0.0038201 1 44360 77.674 61.471 1 NaN NaN 0 25272000 0 25272000 40696 818 15345 15762 63851 63851 YQGVNLYIK 9 1 0 Unmodified _YQGVNLYIK_ 0 0 0 B1ANR0;Q6IQ30;Q13310;H0Y5F5;Q15164;Q53GL4;H0YEU6;Q147Y3;Q3B867 B1ANR0 B1ANR0 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 553.312 2 549.303124 1096.5917 83981.43 0.38934 0.00021387 0.94785 0.00052066 1.3372 0.00073452 549.3029725412 553.311492875341 86.04 0.40998 86.04 85.839 86.249 0 110 27 7 0 0 0 0.037915 2 47144 42.869 36.419 1 1.264 1.0012 0 4911300 2109500 2801800 40697 818 15345 15762 63852;63853 63852 YQGVNLYVK 9 1 0 Unmodified _YQGVNLYVK_ 0 0 0 A0A087WTT1;A0A024R9C1;P11940;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9E2;H0YAR2;H0YAP2;Q4VXU2 A0A087WTT1 A0A087WTT1 PABPC1;PABPC1L Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 1-like MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 542.2956 2 542.295299 1082.57605 80712.32 0.44959 0.00024381 -0.67704 -0.00036716 -0.22745 -0.00012335 542.295409194445 546.302245068679 63.69 0.67712 63.69 63.341 64.018 0 246 60 6 0 0 0 0.0021808 1 37459 75.738 53.607 1 1.857 1.8735 0 28250000 10830000 17421000 40698 273 15346 15763 63854 63854 YQIDPDACFSAK 12 1 0 Unmodified _YQIDPDACFSAK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 711.8265 2 707.819009 1413.62347 71071.5 0.48672 0.00034451 -0.092101 -6.5191E-05 0.39462 0.00027932 707.8192047842 711.82600774719 72.592 0.85903 72.592 72.205 73.064 0 388 64 8 0 0 0 5.0945E-08 2 42520 113.93 35.41 1 1.5001 1.6935 0 136360000 54316000 82041000 40699 639 15347 15764 63855;63856 63856 YQIDPDACFSAK 12 1 0 Unmodified _YQIDPDACFSAK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 711.8271 2 707.819009 1413.62347 71772.78 0.41317 0.00029245 -0.15383 -0.00010889 0.25934 0.00018357 707.819036696582 711.825982266096 71.595 0.82556 71.595 71.12 71.945 0 384 64 8 0 0 0 1.3787E-05 2 42815 106.29 39.599 1 1.4814 1.6742 0 130820000 51593000 79226000 40700 639 15347 15764 63857;63858 63858 YQIDPDACFSAK 12 1 0 Unmodified _YQIDPDACFSAK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 711.8267 2 707.819009 1413.62347 72246.84 0.59288 0.00041965 0.1501 0.00010625 0.74299 0.0005259 707.819240907 711.826246149504 83.121 0.6982 83.121 82.757 83.456 7.6294E-06 254 40 8 0 0 0 0.0049277 2 45330 52.247 10.15 1 2.0626 1.6719 0 25024000 8112400 16912000 40701 639 15347 15764 63859;63860 63860 YQIDPDACFSAK 12 1 0 Unmodified _YQIDPDACFSAK_ 0 0 0 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 711.8267 2 707.819009 1413.62347 72126.33 0.64514 0.00045664 -0.17438 -0.00012343 0.47075 0.00033321 707.819013345433 711.825958731156 83.317 0.67262 83.317 83.019 83.692 0 215 36 8 0 0 0 0.0013581 2 44649 61.344 24 1 1.9931 1.5951 0 21262000 6827700 14435000 40702 639 15347 15764 63861;63862 63862 YQIHIPLPPK 10 1 0 Unmodified _YQIHIPLPPK_ 0 0 0 A0A140VK70;P35998;Q75L23 A0A140VK70 A0A140VK70 PSMC2 26S protease regulatory subunit 7 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 405.5788 3 402.572886 1204.69683 NaN NaN NaN -0.2828 -0.00011385 NaN NaN NaN NaN 84.823 0.32171 84.823 84.569 84.89 0 0 0 0 0.040797 1 50844 34.692 27.047 1 NaN NaN 0 4665900 0 4665900 40703 620 15348 15765 63863 63863 YQILPLHSQIPR 12 0 1 Unmodified _YQILPLHSQIPR_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.2844 3 488.948904 1463.82488 85113.34 0.41576 0.00020329 -0.44112 -0.00021568 -0.025353 -1.2396E-05 488.948574633524 492.284576978104 82.178 1.4351 82.178 81.381 82.816 0 746 122 9 0 0 0 0.0019278 1 48723 48.659 48.659 1 1.2466 1.4536 0 193030000 88903000 104120000 40704 1691 15349 15766 63864 63864 YQILPLHSQIPR 12 0 1 Unmodified _YQILPLHSQIPR_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 488.9489 3 488.948904 1463.82488 85373.88 0.38815 0.00018979 -0.083788 -4.0968E-05 0.30437 0.00014882 488.948724834026 492.284830152881 80.249 1.464 80.249 79.784 81.248 0 598 119 9 0 0 0 3.918E-05 2 48704 94.191 94.191 1 1.1733 1.3504 0 211680000 96342000 115340000 40705 1691 15349 15766 63865;63866 63865 YQILPLHSQIPR 12 0 1 Unmodified _YQILPLHSQIPR_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 738.4254 2 732.919718 1463.82488 73487.73 0.72462 0.00053109 -0.20384 -0.0001494 0.52078 0.00038169 732.91937355919 737.923775767859 80.229 0.53937 80.229 79.964 80.504 0 129 42 4 0 0 0 0.011061 1 48780 45.972 45.972 1 1.1034 1.0838 0 13664000 7251100 6412700 40706 1691 15349 15766 63867 63867 YQILPLHSQIPR 12 0 1 Unmodified _YQILPLHSQIPR_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 492.2849 3 488.948904 1463.82488 NaN NaN NaN -0.85326 -0.0004172 NaN NaN NaN NaN 93.138 0.88495 93.138 92.859 93.744 0 0 0 0 0.036045 1 51878 33.685 28.406 1 NaN NaN 0 25391000 0 25391000 40707 1691 15349 15766 63868 63868 YQILPLHSQIPR 12 0 1 Unmodified _YQILPLHSQIPR_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A ISO-MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 492.2854 3 488.948904 1463.82488 NaN NaN NaN -0.45561 -0.00022277 NaN NaN NaN NaN 92.82 0.91537 92.82 92.46 93.376 0 0 0 0 0.0094556 1 50890 47.039 34.478 1 NaN NaN 0 17597000 0 17597000 40708 1691 15349 15766 63869 63869 YQKSTELLIR 10 1 1 Unmodified _YQKSTELLIR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.8707 2 625.858795 1249.70304 77947.26 0.60592 0.00037922 -0.021875 -1.3691E-05 0.58404 0.00036553 625.858547491855 634.869921976406 42.94 0.50416 42.94 42.733 43.237 0 134 40 6 0 0 0 0.00082456 1 23175 95.608 82.571 1 0.75613 0.87885 0 39431000 22519000 16912000 40709 827;1661;1865;1828 15350 15767 63870 63870 YQLDPTASISAK 12 1 0 Unmodified _YQLDPTASISAK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 651.3458 2 647.337892 1292.66123 75376.35 0.47599 0.00030813 -0.30989 -0.0002006 0.1661 0.00010752 647.337669438299 651.344750647315 69.69 1.2855 69.69 69.39 70.676 0 633 112 8 0 0 0 3.1363E-29 2 40443 166.55 151.4 1 2.2638 2.6727 0 368000000 111050000 256950000 40710 28 15351 15768 63871;63872 63871 YQLDPTASISAK 12 1 0 Unmodified _YQLDPTASISAK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 651.346 2 647.337892 1292.66123 75843.52 0.72229 0.00046757 -0.214 -0.00013853 0.50829 0.00032904 647.3377098866 651.34474360907 68.836 1.3183 68.836 68.275 69.593 0 671 110 8 0 0 0 1.26E-18 3 40649 149.23 134.08 1 2.2732 2.6649 0 324110000 108620000 215490000 40711 28 15351 15768 63873;63874;63875 63873 YQLDPTASISAK 12 1 0 Unmodified _YQLDPTASISAK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 651.3453 2 647.337892 1292.66123 75499.71 0.5331 0.00034509 0.067569 4.374E-05 0.60066 0.00038883 647.338118793645 651.344952239646 80.02 0.92865 80.02 79.557 80.486 -7.6294E-06 317 61 10 0 0 0 0.00052344 2 43124 69.721 65.255 1 3.1034 2.6356 0 61359000 15289000 46070000 40712 28 15351 15768 63876;63877 63876 YQLDPTASISAK 12 1 0 Unmodified _YQLDPTASISAK_ 0 0 0 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;B4DKM5 A0A0A0MR02 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 651.3449 2 647.337892 1292.66123 75566.13 0.56219 0.00036393 -0.11606 -7.5128E-05 0.44614 0.0002888 647.338010623981 651.344826425173 80.31 0.87187 80.31 79.931 80.803 0 274 55 9 0 0 0 0.00021096 2 42447 80.979 65.828 1 3.1412 2.6434 0 51896000 12245000 39652000 40713 28 15351 15768 63878;63879 63878 YQLEIPENFTTR 12 0 1 Unmodified _YQLEIPENFTTR_ 0 0 0 P52701;A0A087WWJ1;Q1L838 P52701 P52701 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 755.8805 2 755.880456 1509.74636 69318.78 0.99912 0.00075521 0.038541 2.9132E-05 1.0377 0.00078434 755.880493437376 760.884340177676 113.12 0.46484 113.12 112.91 113.37 7.6294E-06 79 22 7 0 0 0 0.037481 1 65871 34.692 19.427 1 0.61059 0.51047 0 3569900 2249000 1320900 40714 1601 15352 15769 63880 63880 YQLLQLVEPFGVISNHLILNK 21 1 0 Unmodified _YQLLQLVEPFGVISNHLILNK_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;D6RBI2;D6RE02;D6RIA2;D6RBK5 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 813.4654 3 813.465049 2437.37332 66581.78 0.31771 0.00025844 0.16477 0.00013403 0.48247 0.00039247 813.799394998974 816.470912405405 133.41 0.33139 133.41 133.26 133.59 0 36 8 7 0 0 0 4.5092E-74 2 87373 188.26 188.26 1 1.3221 1.5268 0 222230000 111200000 111030000 40715 542 15353 15770 63881;63882 63882 YQLLQLVEPFGVISNHLILNK 21 1 0 Unmodified _YQLLQLVEPFGVISNHLILNK_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;D6RBI2;D6RE02;D6RIA2;D6RBK5 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 813.7996 3 813.465049 2437.37332 66667.91 0.14479 0.00011778 -0.085518 -6.9566E-05 0.059273 4.8217E-05 813.799432527183 816.470617018962 133.39 0.29909 133.39 133.23 133.53 0 57 7 12 0 0 0 4.4766E-119 2 89583 218.69 218.69 1 1.3572 1.5971 0 384200000 167900000 216290000 40716 542 15353 15770 63883;63884 63884 YQLLQLVEPFGVISNHLILNK 21 1 0 Unmodified _YQLLQLVEPFGVISNHLILNK_ 0 0 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;Q68D11;D6R991;H0Y8T4;Q5CZA7;B4DF66;B3KM87;B4DRS1;D6RBI2;D6RE02;D6RIA2;D6RBK5 D6REM6 D6REM6 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 813.4474 3 813.465049 2437.37332 65069.47 0.9885 0.00080411 -1.1759 -0.00095653 -0.18737 -0.00015242 813.461290949069 816.470782042355 134.85 0.19141 134.85 134.76 134.95 0 13 3 6 0 0 0 0.0032701 1 81614 23.892 23.892 1 1.4265 1.1443 0 22019000 9217000 12802000 40717 542 15353 15770 63885 63885 YQPLASTASDNDFVTPEPR 19 0 1 Unmodified _YQPLASTASDNDFVTPEPR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1055.0051 2 1054.50018 2106.98581 58909.8 0.4651 0.00049045 0.41548 0.00043812 0.88058 0.00092857 1055.00211909468 1060.00625649378 86.216 0.85396 86.216 85.79 86.644 0 526 68 10 0 0 0 1.5948E-05 4 52179 66.285 61.484 1 0.89408 1.0334 0 160900000 79922000 80980000 40718 908 15354 15771 63886;63887;63888;63889 63889 YQPLASTASDNDFVTPEPR 19 0 1 Unmodified _YQPLASTASDNDFVTPEPR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1059.5045 2 1054.50018 2106.98581 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.686 1 86.686 86.186 87.186 0 0 0 0 0.0038329 1 52241 50.897 37.469 1 40719 908 15354 15771 63890 63890 YQPLASTASDNDFVTPEPR 19 0 1 Unmodified _YQPLASTASDNDFVTPEPR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1055.0045 2 1054.50018 2106.98581 58738.23 0.50906 0.0005368 0.16665 0.00017573 0.6757 0.00071253 1055.0017698843 1059.50442409602 85.458 0.82569 85.458 85.018 85.844 0 509 65 10 0 0 0 2.8213E-06 2 52357 83.499 78.516 1 0.88444 1.012 0 161740000 94276000 67462000 40720 908 15354 15771 63891;63892 63892 YQPLASTASDNDFVTPEPR 19 0 1 Unmodified _YQPLASTASDNDFVTPEPR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1060.007 2 1054.50018 2106.98581 58288.24 0.28127 0.0002966 0.16502 0.00017402 0.44629 0.00047062 1055.00165065164 1059.50479412394 98.7 1.2496 98.7 98.21 99.46 7.6294E-06 564 73 12 0 0 0 8.4204E-12 4 55555 100.54 100.54 1 1.5269 1.3174 0 80308000 30631000 49677000 40721 908 15354 15771 63893;63894;63895;63896 63894 YQPLASTASDNDFVTPEPR 19 0 1 Unmodified _YQPLASTASDNDFVTPEPR_ 0 0 0 B3KMS0;Q15021;B3KY03;B4E0B7 B3KMS0 B3KMS0 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1059.5051 2 1054.50018 2106.98581 58776.39 0.26361 0.00027797 0.2816 0.00029694 0.5452 0.00057492 1055.00184687063 1059.50499448251 98.628 1.3111 98.628 98.099 99.41 0 608 79 12 0 0 0 6.5681E-12 4 54900 103.21 103.21 1 1.5002 1.3093 0 74210000 31111000 43099000 40722 908 15354 15771 63897;63898;63899;63900 63898 YQPQTASELIGNELAIK 17 1 0 Unmodified _YQPQTASELIGNELAIK_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 942.0023 2 937.996548 1873.97854 NaN NaN NaN -1.1033 -0.0010348 NaN NaN NaN NaN 106.18 0.16809 106.18 106.06 106.23 0 0 0 0 0.0098155 1 65912 43.382 26.015 1 NaN NaN 0 4490600 0 4490600 40723 1984 15355 15772 63901 63901 YQPQTASELIGNELAIK 17 1 0 Unmodified _YQPQTASELIGNELAIK_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 942.0067 2 937.996548 1873.97854 NaN NaN NaN -0.56232 -0.00052745 NaN NaN NaN NaN 105.58 0.27438 105.58 105.44 105.72 -7.6294E-06 0 0 0 0.025865 1 67109 38.366 23.164 1 NaN NaN 0 3471500 0 3471500 40724 1984 15355 15772 63902 63902 YQPQTASELIGNELAIK 17 1 0 Unmodified _YQPQTASELIGNELAIK_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 942.006 2 937.996548 1873.97854 63981.59 0.87713 0.00082274 -0.13233 -0.00012412 0.7448 0.00069862 937.996347892685 942.003668527128 117.88 0.65505 117.88 117.53 118.19 0 101 27 7 0 0 0 0.0016691 1 69473 39.219 39.219 1 3.3384 2.6345 0 5383500 1564100 3819300 40725 1984 15355 15772 63903 63903 YQPQTASELIGNELAIK 17 1 0 Unmodified _YQPQTASELIGNELAIK_ 0 0 0 Q96QE3;H0UIC2;A0A075B754 Q96QE3 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 942.0042 2 937.996548 1873.97854 62422.61 0.51151 0.00047979 0.42249 0.00039629 0.934 0.00087609 938.498927846631 942.003833922471 117.71 0.35186 117.71 117.56 117.91 0 72 17 6 0 0 0 0.00019612 1 68465 50.088 50.088 1 3.6379 2.9844 0 5127600 1211500 3916100 40726 1984 15355 15772 63904 63904 YQQELEEEIK 10 1 0 Unmodified _YQQELEEEIK_ 0 0 0 F5H6I7;B4DXC4;Q6DD88 F5H6I7 F5H6I7 ATL3 Atlastin-3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 658.8279 2 654.819532 1307.62451 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.944 1 50.944 50.444 51.444 0 0 0 0 0.014309 1 28156 55.908 30.523 1 40727 1047 15356 15773 63905 63905 YQQGDFGYCPR 11 0 1 Unmodified _YQQGDFGYCPR_ 0 0 0 N0E4C7;Q5SRQ6;P67870;N0E466;Q5SRQ3;N0E472;A0A0G2JM12 N0E4C7 N0E4C7 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991 Casein kinase II subunit beta ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 695.7966 2 695.795869 1389.57718 NaN NaN NaN 0.44257 0.00030794 NaN NaN NaN NaN 47.613 0.49343 47.613 47.335 47.828 0 0 0 0 0.0022065 1 25739 76.827 70.522 1 NaN NaN 0 11140000 11140000 0 40728 1358 15357 15774 63906 63906 YQQGDFGYCPR 11 0 1 Unmodified _YQQGDFGYCPR_ 0 0 0 N0E4C7;Q5SRQ6;P67870;N0E466;Q5SRQ3;N0E472;A0A0G2JM12 N0E4C7 N0E4C7 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991 Casein kinase II subunit beta MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 700.8007 2 695.795869 1389.57718 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.628 1 47.628 47.128 48.128 0 0 0 0 0.00036279 1 25860 77.677 73.428 1 40729 1358 15357 15774 63907 63907 YQQGDFGYCPR 11 0 1 Unmodified _YQQGDFGYCPR_ 0 0 0 N0E4C7;Q5SRQ6;P67870;N0E466;Q5SRQ3;N0E472;A0A0G2JM12 N0E4C7 N0E4C7 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991 Casein kinase II subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 700.8003 2 695.795869 1389.57718 73315.7 0.79652 0.00055422 0.41502 0.00028877 1.2115 0.00084298 695.796038104176 700.799924112049 46.417 0.49239 46.417 46.19 46.683 0 131 37 5 0 0 0 7.9225E-05 1 25679 98.033 98.033 1 0.9207 0.99333 0 26300000 12381000 13919000 40730 1358 15357 15774 63908 63908 YQQGDFGYCPR 11 0 1 Unmodified _YQQGDFGYCPR_ 0 0 0 N0E4C7;Q5SRQ6;P67870;N0E466;Q5SRQ3;N0E472;A0A0G2JM12 N0E4C7 N0E4C7 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991 Casein kinase II subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 695.7964 2 695.795869 1389.57718 73519.42 0.51993 0.00036176 -0.34708 -0.0002415 0.17284 0.00012026 695.795722643459 700.799725999946 55.289 0.59499 55.289 54.952 55.547 0 170 38 6 0 0 0 0.0015603 1 27709 66.568 65.452 1 0.52837 0.44194 0 3859400 2682500 1176800 40731 1358 15357 15774 63909 63909 YQQGDFGYCPR 11 0 1 Unmodified _YQQGDFGYCPR_ 0 0 0 N0E4C7;Q5SRQ6;P67870;N0E466;Q5SRQ3;N0E472;A0A0G2JM12 N0E4C7 N0E4C7 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991 Casein kinase II subunit beta MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 695.7963 2 695.795869 1389.57718 73307.2 0.47193 0.00032836 -0.27603 -0.00019206 0.19589 0.0001363 695.795737105385 700.800007974232 55.795 0.56416 55.795 55.518 56.082 3.8147E-06 161 35 6 0 0 0 0.022466 1 27418 42.743 42.743 1 0.56336 0.49476 0 3604400 2214100 1390300 40732 1358 15357 15774 63910 63910 YQQLFEDIR 9 0 1 Unmodified _YQQLFEDIR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;A4FS09 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 611.3096 2 606.306395 1210.59824 77968.76 0.79562 0.00048239 -0.31253 -0.00018949 0.48308 0.0002929 606.306410513387 611.31030299456 79.514 0.51833 79.514 79.276 79.794 0 154 42 5 0 0 0 0.00010981 2 48236 109.71 81.496 1 1.4404 1.481 0 21255000 8790300 12464000 40733 235 15358 15775 63911;63912 63911 YQQLFEDIR 9 0 1 Unmodified _YQQLFEDIR_ 0 0 0 B4DLA6;B3KMX0;A0A024R7U6;P33991;A4FS09 B4DLA6 B4DLA6 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 611.8113 2 606.306395 1210.59824 79668.33 0.50195 0.00030433 -0.4891 -0.00029655 0.012843 7.7871E-06 606.305224522018 611.31052297925 92.308 0.75401 92.308 91.984 92.738 0 109 39 5 0 0 0 0.037381 1 51366 43.083 35.143 1 0.755 0.65577 0 2229400 1316200 913150 40734 235 15358 15775 63913 63913 YQSAPSQAPGNTIER 15 0 1 Unmodified _YQSAPSQAPGNTIER_ 0 0 0 A0A024R101;Q86XZ4 A0A024R101 A0A024R101 SPATS2 Spermatogenesis-associated serine-rich protein 2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 810.3976 2 809.894626 1617.7747 NaN NaN NaN 0.045034 3.6473E-05 NaN NaN NaN NaN 32.805 0.25304 32.805 32.659 32.912 0 0 0 0 0.019232 1 16329 57.175 48.662 1 NaN NaN 0 3326200 3326200 0 40735 64 15359 15776 63914 63914 YQSAPSQAPGNTIER 15 0 1 Unmodified _YQSAPSQAPGNTIER_ 0 0 0 A0A024R101;Q86XZ4 A0A024R101 A0A024R101 SPATS2 Spermatogenesis-associated serine-rich protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 814.9 2 809.894626 1617.7747 68102.05 0.49204 0.0003985 -0.37374 -0.00030269 0.11831 9.5816E-05 810.394964760933 814.898417785131 38.726 0.55019 38.726 38.389 38.939 0 105 39 6 0 0 0 0.027668 1 17566 28.283 28.283 1 1.197 1.0093 0 3033800 1012500 2021300 40736 64 15359 15776 63915 63915 YQTQPVTLGEVEQVQSGK 18 1 0 Unmodified _YQTQPVTLGEVEQVQSGK_ 0 0 0 O95425 O95425 O95425 SVIL Supervillin MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1000.0142 2 996.007644 1990.00073 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.559 1 80.559 80.059 81.059 0 0 0 0 2.8364E-05 1 49104 71.558 60.345 1 40737 1425 15360 15777 63916 63916 YQYGGLNSGR 10 0 1 Unmodified _YQYGGLNSGR_ 0 0 0 V9HW04;P62140;B4DJ75;B7ZB67 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 557.7678 2 557.767437 1113.52032 81986.84 0.78895 0.00044005 -1.6411 -0.00091538 -0.8522 -0.00047533 557.767269772737 563.270697191367 31.483 0.80051 31.483 31.089 31.889 1.9073E-06 231 71 5 0 0 0 0.0030553 2 15534 66.27 60.489 1 1.2577 1.2411 0 12868000 4597700 8270200 40738 1633 15361 15778 63917;63918 63917 YQYGGLNSGR 10 0 1 Unmodified _YQYGGLNSGR_ 0 0 0 V9HW04;P62140;B4DJ75;B7ZB67 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 562.7717 2 557.767437 1113.52032 80954.27 0.38409 0.00021423 0.040342 2.2502E-05 0.42444 0.00023674 557.767388869797 562.771552835377 37.499 0.65132 37.499 37.162 37.813 0 215 53 6 0 0 0 0.0293 1 16398 43.083 43.083 1 1.9839 1.6849 0 2984000 943990 2040000 40739 1633 15361 15778 63919 63919 YQYGGLNSGRPVTPPR 16 0 2 Unmodified _YQYGGLNSGRPVTPPR_ 0 0 1 V9HW04;P62140;B4DJ75 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 594.6462 3 587.972549 1760.89582 78089.38 0.69327 0.00040763 -0.32699 -0.00019226 0.36629 0.00021537 588.30624280047 594.644642139225 47.483 0.79016 47.483 47.226 48.017 0 283 54 9 0 0 0 9.6689E-19 3 26332 114.31 100.58 1 1.0192 1.2197 0 271560000 129430000 142130000 40740 1633 15362 15779 63920;63921;63922 63920 YQYGGLNSGRPVTPPR 16 0 2 Unmodified _YQYGGLNSGRPVTPPR_ 0 0 1 V9HW04;P62140;B4DJ75 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 594.645 3 587.972549 1760.89582 78182.44 0.58679 0.00034502 -0.039426 -2.3182E-05 0.54737 0.00032184 588.306825795335 594.644686028859 57.206 1.2444 57.206 56.75 57.995 0 538 90 10 0 0 0 0.029009 1 28858 28.089 16.819 1 2.1026 1.726 0 29942000 8924800 21017000 40741 1633 15362 15779 63923 63923 YQYGGLNSGRPVTPPR 16 0 2 Unmodified _YQYGGLNSGRPVTPPR_ 0 0 1 V9HW04;P62140;B4DJ75 V9HW04 V9HW04 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 594.6451 3 587.972549 1760.89582 78010.84 0.57004 0.00033517 -0.13066 -7.6822E-05 0.43938 0.00025834 587.972417055293 594.644614610229 57.73 1.1816 57.73 57.367 58.548 -3.8147E-06 516 85 10 0 0 0 9.5736E-05 3 28588 58.071 39.013 1 2.1831 2.029 0 27243000 9112600 18130000 40742 1633 15362 15779 63924;63925;63926 63926 YRDQFTDQQK 10 1 1 Unmodified _YRDQFTDQQK_ 0 0 1 E9PDF6;B0I1S9;O43795;H7C2Y7;B3KQI2 E9PDF6 E9PDF6 MYO1B Unconventional myosin-Ib MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 673.827 2 664.815116 1327.61568 74896.09 -0.031216 -2.0753E-05 0.1813 0.00012053 0.15009 9.9781E-05 664.815541559979 673.826099301173 19.667 0.15485 19.667 19.584 19.739 0 25 7 5 0 0 0 7.6664E-05 1 6038 102.06 70.127 1 1.8292 2.0246 0 7614200 3581200 4033100 40743 805 15363 15780 63927 63927 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8696 3 344.869814 1031.58761 98941.23 0.055429 1.9116E-05 -0.73585 -0.00025377 -0.68042 -0.00023466 344.86977229983 351.541878056683 29.315 0.88326 29.315 28.866 29.75 -1.9073E-06 480 56 10 0 0 0 3.8057E-08 2 13959 127.76 88.46 1 0.81292 0.89595 0 4337100000 2449200000 1887900000 40744 827;1661;1865;1828 15364 15781 63928;63929 63929 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8696 3 344.869814 1031.58761 98941.26 0.05696 1.9644E-05 -0.50773 -0.0001751 -0.45077 -0.00015546 344.869907796998 351.541854644786 30.054 2.1537 30.054 29.627 31.781 -1.9073E-06 1343 194 10 0 0 0 5.1378E-06 6 14506 107.79 80.715 1 0.69312 0.76347 0 3589800000 2097900000 1492000000 40745 827;1661;1865;1828 15364 15781 63930;63931;63932;63933;63934;63935 63930 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8699 3 344.869814 1031.58761 102055.7 0.27614 9.5232E-05 -0.0010573 -3.6462E-07 0.27508 9.4867E-05 344.869805857305 351.541902601539 32.081 2.0421 32.081 31.771 33.813 3.8147E-06 575 196 5 0 0 0 0.00036693 3 15888 80.438 50.271 1 0.67946 0.73948 0 66371000 38857000 27514000 40746 827;1661;1865;1828 15364 15781 63936;63937;63938 63936 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.801 2 516.801083 1031.58761 84101.23 0.662 0.00034212 -0.13134 -6.7878E-05 0.53065 0.00027424 516.800894214647 526.809179581218 33.038 1.2159 33.038 32.902 34.118 0 481 119 5 0 0 0 0.0012897 1 16744 105.1 67.374 1 0.66458 0.72419 0 100090000 59638000 40453000 40747 827;1661;1865;1828 15364 15781 63939 63939 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8695 3 344.869814 1031.58761 101498.6 -0.032073 -1.1061E-05 0.20288 6.9969E-05 0.17081 5.8908E-05 344.869834357301 351.541999544442 34.367 0.9081 34.367 33.813 34.721 0 226 79 4 0 0 0 0.0024551 1 16879 57.59 43.383 1 0.60352 0.65309 0 22396000 11102000 11293000 40748 827;1661;1865;1828 15364 15781 63940 63940 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 351.542 3 344.869814 1031.58761 105195.5 0.047804 1.6486E-05 0.45919 0.00015836 0.50699 0.00017485 344.869963850239 351.542173692091 35.328 0.57446 35.328 35.038 35.612 0 126 51 4 0 0 0 0.0034288 1 17657 54.416 40.298 1 0.65521 0.72388 0 11259000 6664200 4595300 40749 827;1661;1865;1828 15364 15781 63941 63941 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8695 3 344.869814 1031.58761 105223.1 0.22005 7.5889E-05 -0.20418 -7.0416E-05 0.01587 5.473E-06 344.869742619378 351.541913023184 36.193 0.50655 36.193 35.958 36.464 0 112 47 4 0 0 0 0.0088872 1 18267 41.427 30.067 1 0.68341 0.74338 0 14247000 7247800 6998900 40750 827;1661;1865;1828 15364 15781 63942 63942 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 351.5421 3 344.869814 1031.58761 102376.4 -0.06706 -2.3127E-05 -0.076031 -2.6221E-05 -0.14309 -4.9348E-05 344.869825609103 351.541836751495 39.664 0.4042 39.664 39.518 39.922 -3.8147E-06 84 34 5 0 0 0 0.030008 1 20629 29.743 15.974 1 0.78722 0.87282 0 10654000 5973800 4680100 40751 827;1661;1865;1828 15364 15781 63943 63943 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.8013 2 516.801083 1031.58761 NaN NaN NaN 0.083138 4.2966E-05 NaN NaN NaN NaN 29.312 0.82768 29.312 28.85 29.677 0 0 0 0 3.026E-23 1 13937 161.79 107.63 1 NaN NaN 0 9223500000 9223500000 0 40752 827;1661;1865;1828 15364 15781 63944 63944 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 516.8011 2 516.801083 1031.58761 NaN NaN NaN 0.034765 1.7966E-05 NaN NaN NaN NaN 30.255 2.1264 30.255 29.664 31.79 -1.9073E-06 0 0 0 0.00039042 2 15449 107.57 61.857 1 NaN NaN 0 7643800000 7643800000 0 40753 827;1661;1865;1828 15364 15781 63945;63946 63946 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8702 3 344.869814 1031.58761 NaN NaN NaN -0.32202 -0.00011105 NaN NaN NaN NaN 36.983 0.46614 36.983 36.87 37.336 0 0 0 0 0.022773 1 18931 46.39 31.723 1 NaN NaN 0 4461700 4461700 0 40754 827;1661;1865;1828 15364 15781 63947 63947 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 351.542 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 33.635 1 33.635 33.135 34.135 0 0 0 0 0.034002 1 16766 43.442 22.922 1 40755 827;1661;1865;1828 15364 15781 63948 63948 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.87 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.659 1 34.659 34.159 35.159 0 0 0 0 0.001645 1 17379 61.679 39.997 1 40756 827;1661;1865;1828 15364 15781 63949 63949 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8708 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.043 1 44.043 43.543 44.543 0 0 0 0 0.022228 1 23611 40.724 16.569 1 40757 827;1661;1865;1828 15364 15781 63950 63950 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8695 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.985 1 45.985 45.485 46.485 3.8147E-06 0 0 0 0.020973 1 24806 41.448 15.711 1 40758 827;1661;1865;1828 15364 15781 63951 63951 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8703 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.165 1 50.165 49.665 50.665 -3.8147E-06 0 0 0 0.0055959 1 27673 52.255 33.479 1 40759 827;1661;1865;1828 15364 15781 63952 63952 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8703 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.052 1 51.052 50.552 51.552 0 0 0 0 0.0055959 1 28231 52.255 27.332 1 40760 827;1661;1865;1828 15364 15781 63953 63953 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8697 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.233 1 52.233 51.733 52.733 3.8147E-06 0 0 0 0.0017546 1 28998 59.35 38.05 1 40761 827;1661;1865;1828 15364 15781 63954 63954 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8705 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.869 1 55.869 55.369 56.369 0 0 0 0 0.0055959 1 31442 52.255 34.269 1 40762 827;1661;1865;1828 15364 15781 63955 63955 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8702 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.433 1 60.433 59.933 60.933 0 0 0 0 0.024695 1 34489 38.303 22.922 1 40763 827;1661;1865;1828 15364 15781 63956 63956 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8694 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.107 1 65.107 64.607 65.607 0 0 0 0 0.019764 1 37469 41.876 23.1 1 40764 827;1661;1865;1828 15364 15781 63957 63957 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8698 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.124 1 69.124 68.624 69.624 0 0 0 0 0.007555 1 40115 49.715 32.945 1 40765 827;1661;1865;1828 15364 15781 63958 63958 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 344.8694 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.567 1 70.567 70.067 71.067 -7.6294E-06 0 0 0 0.0055959 1 41075 52.255 38.048 1 40766 827;1661;1865;1828 15364 15781 63959 63959 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.87 3 344.869814 1031.58761 100040.9 0.1293 4.459E-05 -0.88647 -0.00030572 -0.75718 -0.00026113 344.869640992713 351.541944937098 28.435 0.67674 28.435 28.025 28.702 0 374 45 10 0 0 0 1.5749E-08 2 13365 132.01 90.562 1 0.8404 1.0747 0 3608500000 1989000000 1619500000 40767 827;1661;1865;1828 15364 15781 63960;63961 63960 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.8013 2 516.801083 1031.58761 83165.22 0.27452 0.00014187 0.0050164 2.5925E-06 0.27954 0.00014447 516.801011479647 526.809390000091 30.234 2.8542 30.234 30.058 32.912 -1.9073E-06 926 256 9 0 0 0 0.005418 3 14925 91.318 64.064 1 0.69284 0.83814 0 414220000 243270000 170950000 40768 827;1661;1865;1828 15364 15781 63962;63963;63964 63962 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.8011 2 516.801083 1031.58761 84204.66 0.26013 0.00013444 0.049621 2.5644E-05 0.30975 0.00016008 516.800990889144 526.809371062281 33.159 0.5306 33.159 32.912 33.442 3.8147E-06 179 48 7 0 0 0 0.010774 1 16437 78.113 54.684 1 0.70373 0.81475 0 74709000 43376000 31333000 40769 827;1661;1865;1828 15364 15781 63965 63965 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.8009 2 516.801083 1031.58761 83759.51 0.297 0.00015349 -0.091653 -4.7366E-05 0.20535 0.00010612 516.801031280953 526.809198928189 33.599 1.3093 33.599 33.279 34.589 0 300 103 6 0 0 0 0.0038622 1 16954 95.358 65.191 1 0.70561 0.81434 0 66022000 40379000 25643000 40770 827;1661;1865;1828 15364 15781 63966 63966 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 345.2042 3 344.869814 1031.58761 NaN NaN NaN -0.051017 -1.7594E-05 NaN NaN NaN NaN 25.994 0.21412 25.994 25.916 26.131 0 0 0 0 0.015293 1 11538 60.892 50.19 1 NaN NaN 0 6305200 6305200 0 40771 827;1661;1865;1828 15364 15781 63967 63967 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 516.8015 2 516.801083 1031.58761 NaN NaN NaN 0.27318 0.00014118 NaN NaN NaN NaN 28.434 0.62603 28.434 28.076 28.702 0 0 0 0 3.026E-23 1 13359 161.79 107.63 1 NaN NaN 0 6707600000 6707600000 0 40772 827;1661;1865;1828 15364 15781 63968 63968 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 351.5417 3 344.869814 1031.58761 NaN NaN NaN -0.12461 -4.2973E-05 NaN NaN NaN NaN 31.251 0.71431 31.251 31.11 31.825 0 0 0 0 0.0055655 1 15540 73.985 54.223 1 NaN NaN 0 13084000 0 13084000 40773 827;1661;1865;1828 15364 15781 63969 63969 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8697 3 344.869814 1031.58761 NaN NaN NaN -0.24271 -8.3704E-05 NaN NaN NaN NaN 32.624 0.76292 32.624 32.139 32.902 0 0 0 0 0.010975 1 16071 54.191 37.52 1 NaN NaN 0 10033000 10033000 0 40774 827;1661;1865;1828 15364 15781 63970 63970 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8698 3 344.869814 1031.58761 NaN NaN NaN 0.06594 2.2741E-05 NaN NaN NaN NaN 33.155 0.69061 33.155 32.902 33.593 0 0 0 0 0.015047 1 16733 52.255 34.89 1 NaN NaN 0 12501000 12501000 0 40775 827;1661;1865;1828 15364 15781 63971 63971 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8698 3 344.869814 1031.58761 NaN NaN NaN -0.1089 -3.7557E-05 NaN NaN NaN NaN 42.402 0.23367 42.402 42.302 42.536 0 0 0 0 0.019777 1 22844 49.715 35.508 1 NaN NaN 0 3015600 3015600 0 40776 827;1661;1865;1828 15364 15781 63972 63972 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8706 3 344.869814 1031.58761 NaN NaN NaN 0.094309 3.2524E-05 NaN NaN NaN NaN 43.298 0.27159 43.298 43.128 43.399 0 0 0 0 0.019777 1 23414 49.715 31.275 1 NaN NaN 0 4382900 4382900 0 40777 827;1661;1865;1828 15364 15781 63973 63973 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.87 3 344.869814 1031.58761 NaN NaN NaN 0.023054 7.9505E-06 NaN NaN NaN NaN 55.815 0.33229 55.815 55.579 55.911 3.8147E-06 0 0 0 0.0098127 1 32026 55.112 38.016 1 NaN NaN 0 1637000 1637000 0 40778 827;1661;1865;1828 15364 15781 63974 63974 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 351.5416 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.957 1 28.957 28.457 29.457 1.9073E-06 0 0 0 0.00421 1 13876 65.305 46.575 1 40779 827;1661;1865;1828 15364 15781 63975 63975 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.8102 2 516.801083 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.678 1 29.678 29.178 30.178 0 0 0 0 0.00015063 1 14364 107.56 73.767 1 40780 827;1661;1865;1828 15364 15781 63976 63976 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 351.5422 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 29.744 1 29.744 29.244 30.244 1.9073E-06 0 0 0 0.009838 1 14416 56.432 37.701 1 40781 827;1661;1865;1828 15364 15781 63977 63977 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 351.5421 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.374 1 30.374 29.874 30.874 -1.9073E-06 0 0 0 0.020412 1 14873 49.715 30.984 1 40782 827;1661;1865;1828 15364 15781 63978 63978 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 351.5421 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.61 1 30.61 30.11 31.11 -1.9073E-06 0 0 0 0.00064029 1 15033 94.692 65.219 1 40783 827;1661;1865;1828 15364 15781 63979 63979 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8699 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.792 1 30.792 30.292 31.292 0 0 0 0 0.0016187 1 15146 63.184 36.047 1 40784 827;1661;1865;1828 15364 15781 63980 63980 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8702 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 31.555 1 31.555 31.055 32.055 0 0 0 0 0.001117 1 15633 74.376 47.073 1 40785 827;1661;1865;1828 15364 15781 63981 63981 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 526.8099 2 516.801083 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.498 1 32.498 31.998 32.998 0 0 0 0 0.04317 1 16164 61.679 29.208 1 40786 827;1661;1865;1828 15364 15781 63982 63982 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8699 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 34.201 1 34.201 33.701 34.701 0 0 0 0 0.0096565 1 17283 47.603 27.369 1 40787 827;1661;1865;1828 15364 15781 63983 63983 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8696 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 46.175 1 46.175 45.675 46.675 0 0 0 0 0.022228 1 25444 40.724 29.56 1 40788 827;1661;1865;1828 15364 15781 63984 63984 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8696 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.912 1 48.912 48.412 49.412 0 0 0 0 0.0096565 1 27448 46.39 31.009 1 40789 827;1661;1865;1828 15364 15781 63985 63985 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8693 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.027 1 51.027 50.527 51.527 -3.8147E-06 0 0 0 0.0015998 1 28875 65.224 43.138 1 40790 827;1661;1865;1828 15364 15781 63986 63986 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8697 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.951 1 54.951 54.451 55.451 0 0 0 0 0.036546 1 31450 35.269 21.891 1 40791 827;1661;1865;1828 15364 15781 63987 63987 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8709 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.048 1 57.048 56.548 57.548 -3.8147E-06 0 0 0 0.0017546 1 32953 59.35 41.985 1 40792 827;1661;1865;1828 15364 15781 63988 63988 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8698 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.672 1 67.672 67.172 68.172 0 0 0 0 0.021922 1 40118 39.547 25.34 1 40793 827;1661;1865;1828 15364 15781 63989 63989 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.87 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.689 1 72.689 72.189 73.189 -7.6294E-06 0 0 0 0.02335 1 43624 40.352 26.145 1 40794 827;1661;1865;1828 15364 15781 63990 63990 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8696 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.061 1 74.061 73.561 74.561 0 0 0 0 0.0033057 1 44534 57.59 43.383 1 40795 827;1661;1865;1828 15364 15781 63991 63991 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 344.8697 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.607 1 80.607 80.107 81.107 0 0 0 0 0.050863 1 49138 31.871 17.664 1 40796 827;1661;1865;1828 15364 15781 63992 63992 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 344.8698 3 344.869814 1031.58761 98722.77 -0.025379 -8.7524E-06 -0.4611 -0.00015902 -0.48648 -0.00016777 344.869902453602 351.541881732851 33.297 5.266 33.297 32.796 38.062 3.8147E-06 2021 441 9 0 0 0 2.8622E-08 11 14785 125.57 76.775 1 0.78713 0.59336 0 790960000 432860000 358100000 40797 827;1661;1865;1828 15364 15781 63993;63994;63995;63996;63997;63998;63999;64000;64001;64002;64003 63994 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 344.8698 3 344.869814 1031.58761 101713.4 -0.085106 -2.9351E-05 0.016851 5.8116E-06 -0.068255 -2.3539E-05 344.869820100177 351.54196090306 38.348 1.4795 38.348 37.777 39.257 0 303 119 6 0 0 0 0.058379 2 17359 21.746 14.1 1 0.78985 0.67116 0 7939900 3951300 3988500 40798 827;1661;1865;1828 15364 15781 64004;64005 64004 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 516.8016 2 516.801083 1031.58761 NaN NaN NaN -0.033526 -1.7326E-05 NaN NaN NaN NaN 33.304 13.429 33.304 32.616 46.045 0 0 0 0 2.6458E-10 1 14321 138.98 87.121 1 NaN NaN 0 1574400000 1574400000 0 40799 827;1661;1865;1828 15364 15781 64006 64006 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 351.5421 3 344.869814 1031.58761 NaN NaN NaN -0.54934 -0.00018945 NaN NaN NaN NaN 32.988 0.3393 32.988 32.779 33.118 0 0 0 0 0.00044336 1 14322 91.584 67.554 1 NaN NaN 0 291940000 0 291940000 40800 827;1661;1865;1828 15364 15781 64007 64007 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 516.8011 2 516.801083 1031.58761 82586.13 -0.10343 -5.3451E-05 0.34494 0.00017826 0.24151 0.00012481 516.801131916243 526.809541638806 20.824 2.0868 20.824 20.688 22.775 0 344 89 7 0 0 0 0.028667 1 5633 67.032 35.743 1 0.84237 0.77379 0 12708000 6839900 5867900 40801 827;1661;1865;1828 15364 15781 64008 64008 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 1 K7EK07;B2R4P9;P84243;B4E380;Q16695;B2R6Y1;K7EMV3;B4DEB1;A8K4Y7;K7ES00;Q6NXT2;K7EP01;Q6TXQ4;P68431;Q5TEC6;Q71DI3 K7EK07;P68431;Q5TEC6;Q71DI3 K7EK07 H3F3B;H3F3A;HIST3H3;H3F3C;HIST1H3A;HIST2H3PS2;HIST2H3A Histone H3;Histone H3.3;Histone H3.1t;Histone H3.3C;Histone H3.1;Histone H3.2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 344.8699 3 344.869814 1031.58761 99289.55 -0.12221 -4.2145E-05 -0.48276 -0.00016649 -0.60497 -0.00020864 344.869878451669 351.54190048269 33.335 7.1742 33.335 32.759 39.933 0 2142 584 10 0 0 0 1.1907E-05 13 13819 99.815 67.554 1 0.82575 0.80898 0 840490000 452010000 388480000 40802 827;1661;1865;1828 15364 15781 64009;64010;64011;64012;64013;64014;64015;64016;64017;64018;64019;64020;64021 64010 YRTEAHQDVVGR 12 0 2 Unmodified _YRTEAHQDVVGR_ 0 0 1 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 484.2484 3 477.576018 1429.70622 87606.5 0.65601 0.00031329 -0.33738 -0.00016112 0.31863 0.00015217 477.57575795077 484.248214853849 17.039 0.34624 17.039 16.937 17.284 0 34 10 4 0 0 0 9.8743E-05 2 4071 85.522 85.522 1 0.86292 0.90545 0 13857000 7354900 6502400 40803 2023;1687 15365 15782 64022;64023 64023 YSDADIEPFLK 11 1 0 Unmodified _YSDADIEPFLK_ 0 0 0 Q14008;Q8IYN5;H0YDX5 Q14008 Q14008 CKAP5 Cytoskeleton-associated protein 5 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 653.3268 2 649.319168 1296.62378 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.153 1 93.153 92.653 93.653 -7.6294E-06 0 0 0 0.00026946 1 57791 79.148 51.894 1 40804 1725 15366 15783 64024 64024 YSDDTPLPTPSYK 13 1 0 Unmodified _YSDDTPLPTPSYK_ 0 0 0 A8K6G9;Q92620 A8K6G9 A8K6G9 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 746.3591 2 742.351197 1482.68784 NaN NaN NaN 0.2608 0.00019361 NaN NaN NaN NaN 70.311 0.1465 70.311 70.216 70.363 0 0 0 0 0.032023 2 40890 42.336 26.198 1 NaN NaN 0 1768700 0 1768700 40805 760 15367 15784 64025;64026 64025 YSDIDIILLK 10 1 0 Unmodified _YSDIDIILLK_ 0 0 0 A0A024RAM0;Q92973 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 596.8452 2 596.844822 1191.67509 80619.39 0.91747 0.00054759 0.26776 0.00015981 1.1852 0.0007074 596.844850444787 600.851892900349 114.01 0.76066 114.01 113.64 114.4 0 183 54 5 0 0 0 0.01212 1 72227 51.066 6.184 1 1.4816 1.4888 0 9927200 4085100 5842100 40806 309 15368 15785 64027 64027 YSDIDIILLK 10 1 0 Unmodified _YSDIDIILLK_ 0 0 0 A0A024RAM0;Q92973 A0A024RAM0 A0A024RAM0 TNPO1 Transportin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 601.3542 2 596.844822 1191.67509 80967.33 0.74026 0.00044182 0.21152 0.00012624 0.95178 0.00056807 596.844975086356 600.851877418268 113.27 0.69401 113.27 112.98 113.68 0 180 47 5 0 0 0 9.0954E-05 3 73576 97.635 68.939 1 1.4182 1.4773 0 11055000 4679200 6375900 40807 309 15368 15785 64028;64029;64030 64030 YSDLLSQSLNQPLTSSK 17 1 0 Unmodified _YSDLLSQSLNQPLTSSK_ 0 0 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;G1UI29;Q6P4A2 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 941.4833 2 940.983637 1879.95272 63732.34 0.69063 0.00064987 -0.23523 -0.00022134 0.45541 0.00042853 941.48364298649 944.990404071858 109.08 0.46796 109.08 108.85 109.32 0 54 20 4 0 0 0 0.018605 1 61836 26.232 19.064 1 1.1595 0.94175 0 2889600 1108200 1781400 40808 476 15369 15786 64031 64031 YSDLQNLAK 9 1 0 Unmodified _YSDLQNLAK_ 0 0 0 Q9BXS6;A8K4B4;H0YKA7 Q9BXS6 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 530.2816 2 526.274564 1050.53457 84992.75 0.29479 0.00015514 0.10743 5.6538E-05 0.40222 0.00021168 526.274523764141 530.281505709161 55.618 0.77274 55.618 55.18 55.952 3.8147E-06 173 44 6 0 0 0 0.00085417 2 27245 93.429 87.257 1 0.51349 0.4201 0 4822200 3147200 1675100 40809 2014 15370 15787 64032;64033 64033 YSDLTTLVAFPSSSVYPTK 19 1 0 Unmodified _YSDLTTLVAFPSSSVYPTK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1038.5315 2 1038.53042 2075.04629 60098.69 0.47478 0.00049308 0.33944 0.00035252 0.81422 0.00084559 1039.03208934348 1042.53800896176 118.74 0.54478 118.74 118.45 119 -7.6294E-06 168 31 8 0 0 0 2.3943E-07 3 76182 87.18 87.18 1 1.2285 1.206 0 23018000 10946000 12072000 40810 568 15371 15788 64034;64035;64036 64035 YSDLTTLVAFPSSSVYPTK 19 1 0 Unmodified _YSDLTTLVAFPSSSVYPTK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1038.5323 2 1038.53042 2075.04629 59496.45 0.37499 0.00038944 0.13019 0.00013521 0.50519 0.00052465 1038.53231712499 1043.0384916702 130.73 0.55132 130.73 130.45 131 0 146 25 10 0 0 0 0.011457 1 79233 24.558 24.558 1 0.78949 0.62894 0 6759800 3529200 3230600 40811 568 15371 15788 64037 64037 YSDLTTLVAFPSSSVYPTK 19 1 0 Unmodified _YSDLTTLVAFPSSSVYPTK_ 0 0 0 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492;B4DUQ9;J3KQ69;B4DS46 Q53HJ4 Q53HJ4 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1039.033 2 1038.53042 2075.04629 59261.56 0.72372 0.00075161 -0.35672 -0.00037046 0.367 0.00038114 1038.53059291531 1043.0384241342 130.61 0.47395 130.61 130.34 130.81 0 133 19 10 0 0 0 3.4143E-05 1 78208 53.946 53.946 1 0.71759 0.58567 0 7959000 4582500 3376500 40812 568 15371 15788 64038 64038 YSDMIVAAIQAEK 13 1 0 Oxidation (M) _YSDM(ox)IVAAIQAEK_ YSDM(1)IVAAIQAEK YSDM(81.64)IVAAIQAEK 0 1 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 727.8636 2 727.863417 1453.71228 71276.48 0.85044 0.000619 -0.33757 -0.0002457 0.51287 0.0003733 727.863358771358 731.870181340797 79.699 0.63051 79.699 79.304 79.934 0 279 54 7 0 0 0 6.7262E-05 1 47204 81.642 81.642 1 1.7985 1.9969 0 59626000 20690000 38935000 40813 1451 15372 15789 64039 64039 1154 YSDMIVAAIQAEK 13 1 0 Oxidation (M) _YSDM(ox)IVAAIQAEK_ YSDM(1)IVAAIQAEK YSDM(118.9)IVAAIQAEK 0 1 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 731.8705 2 727.863417 1453.71228 71171.3 0.84154 0.00061252 -0.16495 -0.00012006 0.67658 0.00049246 727.86334238227 731.87031378197 80.115 0.70156 80.115 79.849 80.551 0 312 58 8 0 0 0 3.0367E-09 1 47597 118.9 108.67 1 1.786 2.0217 0 88497000 37792000 50705000 40814 1451 15372 15789 64040 64040 1154 YSDMIVAAIQAEK 13 1 0 Oxidation (M) _YSDM(ox)IVAAIQAEK_ YSDM(1)IVAAIQAEK YSDM(118.77)IVAAIQAEK 0 1 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.8705 2 727.863417 1453.71228 71612.14 0.5679 0.00041336 -0.40567 -0.00029527 0.16224 0.00011809 727.863213634029 731.870185776441 78.622 0.576 78.622 78.301 78.877 0 274 50 7 0 0 0 3.1024E-09 2 47730 118.77 118.77 1 1.801 2.0132 0 102170000 32271000 69902000 40815 1451 15372 15789 64041;64042 64042 1154 YSDMIVAAIQAEK 13 1 0 Oxidation (M) _YSDM(ox)IVAAIQAEK_ YSDM(1)IVAAIQAEK YSDM(53.24)IVAAIQAEK 0 1 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 731.8715 2 727.863417 1453.71228 71758.75 0.70168 0.00051073 0.64262 0.00046774 1.3443 0.00097847 727.86358597824 731.87050522914 79.159 0.70333 79.159 78.857 79.56 -7.6294E-06 371 60 8 0 0 0 0.0012429 1 48253 53.237 53.237 1 1.8844 2.107 0 53432000 18389000 35044000 40816 1451 15372 15789 64043 64043 1154 YSDMIVAAIQAEK 13 1 0 Oxidation (M) _YSDM(ox)IVAAIQAEK_ YSDM(1)IVAAIQAEK YSDM(47.15)IVAAIQAEK 0 1 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.864 2 727.863417 1453.71228 71766.79 0.81973 0.00059665 -0.46213 -0.00033637 0.3576 0.00026028 727.863264874601 731.870015901421 91.511 0.63188 91.511 91.217 91.849 0 258 46 8 0 0 0 0.0027079 1 50795 47.154 43.509 1 0.24909 0.19685 0 10609000 8665100 1943500 40817 1451 15372 15789 64044 64044 1154 YSDMIVAAIQAEK 13 1 0 Oxidation (M) _YSDM(ox)IVAAIQAEK_ YSDM(1)IVAAIQAEK YSDM(56.23)IVAAIQAEK 0 1 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 727.8641 2 727.863417 1453.71228 71633.15 0.6971 0.00050739 -0.48502 -0.00035303 0.21207 0.00015436 727.863589098657 732.371467965271 92.142 0.81451 92.142 91.795 92.609 0 273 45 9 0 0 0 0.00088748 1 51306 56.225 56.225 1 0.26666 0.20912 0 11458000 9113600 2344000 40818 1451 15372 15789 64045 64045 1154 YSDMIVAAIQAEK 13 1 0 Oxidation (M) _YSDM(ox)IVAAIQAEK_ YSDM(1)IVAAIQAEK YSDM(65.18)IVAAIQAEK 0 1 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.8633 2 727.863417 1453.71228 72006.3 0.5766 0.00041969 -0.39551 -0.00028788 0.18109 0.00013181 727.863337545058 731.870052943324 91.459 0.64488 91.459 91.13 91.775 0 273 45 9 0 0 0 0.00014996 1 49920 65.179 61.416 1 0.25534 0.20999 0 10042000 7960700 2081300 40819 1451 15372 15789 64046 64046 1154 YSDMIVAAIQAEK 13 1 0 Oxidation (M) _YSDM(ox)IVAAIQAEK_ YSDM(1)IVAAIQAEK YSDM(44.3)IVAAIQAEK 0 1 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 727.8638 2 727.863417 1453.71228 70244.19 0.48705 0.00035451 -0.372 -0.00027076 0.11506 8.3744E-05 727.863629939211 732.371812478523 92.035 0.85905 92.035 91.708 92.567 0 245 45 8 0 0 0 0.0039328 1 50419 44.299 44.299 1 0.30882 0.25453 0 10802000 8236100 2565800 40820 1451 15372 15789 64047 64047 1154 YSDMIVAAIQAEK 13 1 0 Unmodified _YSDMIVAAIQAEK_ 0 0 0 P07305 P07305 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 719.8669 2 719.86596 1437.71737 NaN NaN NaN 0.20494 0.00014753 NaN NaN NaN NaN 110.29 0.42645 110.29 110.12 110.55 0 0 0 0 0.0037185 1 63643 64.121 59.421 1 NaN NaN 0 6720500 6720500 0 40821 1451 15372 15790 64048 64048 YSEAITQSVLK 11 1 0 Unmodified _YSEAITQSVLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 619.8342 2 619.834985 1237.65542 77204.92 0.50402 0.00031241 0.19981 0.00012385 0.70384 0.00043626 619.835131429134 623.841921582508 68.832 0.47106 68.832 68.547 69.018 0 195 40 6 0 0 0 0.00033089 2 39822 86.898 77.715 1 1.0837 1.1161 0 28879000 15159000 13720000 40822 1392 15373 15791 64049;64050 64050 YSEAITQSVLK 11 1 0 Unmodified _YSEAITQSVLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 ISO-MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.8356 2 619.834985 1237.65542 NaN NaN NaN 0.36447 0.00022591 NaN NaN NaN NaN 78.972 0.55367 78.972 78.761 79.315 0 0 0 0 0.0028775 1 42496 70.363 45.587 1 NaN NaN 0 2113100 2113100 0 40823 1392 15373 15791 64051 64051 YSEAITQSVLK 11 1 0 Unmodified _YSEAITQSVLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 623.8424 2 619.834985 1237.65542 78033.28 0.43343 0.00026866 0.41327 0.00025616 0.8467 0.00052481 619.835178846214 623.842139320224 79.214 0.49721 79.214 78.983 79.48 0 148 28 6 0 0 0 0.004119 2 41738 58.592 54.369 1 1.3801 1.0783 0 3683900 1563800 2120000 40824 1392 15373 15791 64052;64053 64053 YSESAGGFYYVESGK 15 1 0 Unmodified _YSESAGGFYYVESGK_ 0 0 0 G3V198;Q12769;E9PR16;E9PSI3 G3V198 G3V198 NUP160 Nuclear pore complex protein Nup160 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 826.8716 2 822.364835 1642.71512 68180.4 0.8162 0.00067121 -0.081669 -6.7162E-05 0.73453 0.00060405 822.365184480624 826.371688630658 70.756 0.51077 70.756 70.481 70.992 0 112 41 4 0 0 0 0.00022395 1 41123 69.864 69.864 1 1.2243 1.2313 0 7332200 2884900 4447300 40825 1271 15374 15792 64054 64054 YSESAGGFYYVESGK 15 1 0 Unmodified _YSESAGGFYYVESGK_ 0 0 0 G3V198;Q12769;E9PR16;E9PSI3 G3V198 G3V198 NUP160 Nuclear pore complex protein Nup160 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 826.3688 2 822.364835 1642.71512 68269.61 0.59032 0.00048546 -0.42437 -0.00034899 0.16595 0.00013647 822.364776521019 826.371005458906 69.513 0.49335 69.513 69.261 69.754 7.6294E-06 133 41 6 0 0 0 0.0002224 2 41335 67.456 67.456 1 1.132 1.1809 0 10063000 5456200 4606700 40826 1271 15374 15792 64055;64056 64056 YSESAGGFYYVESGK 15 1 0 Unmodified _YSESAGGFYYVESGK_ 0 0 0 G3V198;Q12769;E9PR16;E9PSI3 G3V198 G3V198 NUP160 Nuclear pore complex protein Nup160 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 822.8659 2 822.364835 1642.71512 68953.94 0.81716 0.000672 -0.7085 -0.00058265 0.10866 8.9357E-05 822.865821567317 826.37157809496 81.255 0.51766 81.255 81.039 81.556 -7.6294E-06 132 29 6 0 0 0 0.0013559 1 43122 47.991 47.991 1 1.2025 0.97576 0 1906900 1002400 904570 40827 1271 15374 15792 64057 64057 YSEVDDSLPSGGEK 14 1 0 Unmodified _YSEVDDSLPSGGEK_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 741.8353 2 741.833368 1481.65218 70993.68 0.92126 0.00068343 0.30485 0.00022614 1.2261 0.00090957 741.833722366923 745.840430011675 44.696 0.6703 44.696 44.357 45.028 0 208 59 5 0 0 0 2.446E-10 2 23927 124.42 124.42 1 0.87869 0.92882 0 31090000 15258000 15832000 40828 187 15375 15793 64058;64059 64059 YSEVDDSLPSGGEK 14 1 0 Unmodified _YSEVDDSLPSGGEK_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 746.3419 2 741.833368 1481.65218 71613.65 1.8166 0.0013476 -0.8043 -0.00059666 1.0123 0.00075098 741.83304097257 745.839986217258 43.882 0.49529 43.882 43.603 44.098 0 207 40 7 0 0 0 3.6418E-06 3 23989 101.93 101.93 1 0.99087 0.99827 0 27906000 14828000 13079000 40829 187 15375 15793 64060;64061;64062 64062 YSEVDDSLPSGGEK 14 1 0 Unmodified _YSEVDDSLPSGGEK_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 745.8414 2 741.833368 1481.65218 70415.1 0.48374 0.00035885 0.30804 0.00022851 0.79178 0.00058737 741.834085303378 745.840614057765 52.168 0.74117 52.168 51.774 52.515 -3.8147E-06 332 62 8 0 0 0 8.9628E-05 4 25671 87.001 87.001 1 1.3823 1.109 0 7590500 2848200 4742300 40830 187 15375 15793 64063;64064;64065;64066 64065 YSEVDDSLPSGGEK 14 1 0 Unmodified _YSEVDDSLPSGGEK_ 0 0 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 745.8405 2 741.833368 1481.65218 70656.85 0.46879 0.00034776 0.12248 9.0859E-05 0.59127 0.00043862 741.833835766809 745.840590043152 52.713 0.78994 52.713 52.326 53.116 -3.8147E-06 365 63 9 0 0 0 0.0043219 2 25407 45.653 45.653 1 1.2986 1.0582 0 6661800 2692500 3969300 40831 187 15375 15793 64067;64068 64067 YSEVFEAINITNNEK 15 1 0 Unmodified _YSEVFEAINITNNEK_ 0 0 0 Q2I0Y7;E7EU96;B5BUH5;B2R6D7;Q5U5J2;Q8NEV1;P68400;V9GYA2;V9GY80 Q2I0Y7 Q2I0Y7 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 889.9381 2 885.930874 1769.84719 66173.26 0.94192 0.00083448 0.18184 0.0001611 1.1238 0.00099558 885.931091701442 890.43907420598 98.741 0.38406 98.741 98.487 98.871 0 59 30 4 0 0 0 0.0001138 2 60431 81.625 77.952 1 1.1137 1.1145 0 7691400 3236500 4454800 40832 840 15376 15794 64069;64070 64070 YSEVFEAINITNNEK 15 1 0 Unmodified _YSEVFEAINITNNEK_ 0 0 0 Q2I0Y7;E7EU96;B5BUH5;B2R6D7;Q5U5J2;Q8NEV1;P68400;V9GYA2;V9GY80 Q2I0Y7 Q2I0Y7 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 886.5596 2 885.930874 1769.84719 NaN NaN NaN -0.29161 -0.00025835 NaN NaN NaN NaN 98.804 0.19214 98.804 98.776 98.968 0 0 0 0 0.052466 1 60487 42.976 25.95 1 NaN NaN 0 3061400 3061400 0 40833 840 15376 15794 64071 64071 YSEVFEAINITNNEK 15 1 0 Unmodified _YSEVFEAINITNNEK_ 0 0 0 Q2I0Y7;E7EU96;B5BUH5;B2R6D7;Q5U5J2;Q8NEV1;P68400;V9GYA2;V9GY80 Q2I0Y7 Q2I0Y7 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 889.9381 2 885.930874 1769.84719 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.027 1 98.027 97.527 98.527 0 0 0 0 0.0015967 1 61294 68.536 61.257 1 40834 840 15376 15794 64072 64072 YSEVFEAINITNNEK 15 1 0 Unmodified _YSEVFEAINITNNEK_ 0 0 0 Q2I0Y7;E7EU96;B5BUH5;B2R6D7;Q5U5J2;Q8NEV1;P68400;V9GYA2;V9GY80 Q2I0Y7 Q2I0Y7 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 890.4371 2 885.930874 1769.84719 66324.39 0.28964 0.0002566 0.51221 0.00045378 0.80185 0.00071038 886.432899341479 889.938987367457 111.42 0.26991 111.42 111.26 111.53 -7.6294E-06 47 12 6 0 0 0 0.029936 2 63601 27.409 26.659 1 0.6834 0.53822 0 2034400 866210 1168200 40835 840 15376 15794 64073;64074 64073 YSEVFEAINITNNER 15 0 1 Unmodified _YSEVFEAINITNNER_ 0 0 0 P19784;H3BNI9 P19784 P19784 CSNK2A2 Casein kinase II subunit alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 905.4366 2 899.933948 1797.85334 64297.98 0.70281 0.00063248 -2.1823 -0.001964 -1.4795 -0.0013315 900.435366694732 904.937488479434 99.474 0.53596 99.474 99.271 99.807 7.6294E-06 126 42 5 0 0 0 1.6187E-05 2 62376 88.338 66.942 1 1.9417 1.946 0 11313000 3720800 7591900 40836 1501 15377 15795 64075;64076 64076 YSEVFEAINITNNER 15 0 1 Unmodified _YSEVFEAINITNNER_ 0 0 0 P19784;H3BNI9 P19784 P19784 CSNK2A2 Casein kinase II subunit alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 899.9346 2 899.933948 1797.85334 65729.66 0.74971 0.00067469 -0.9367 -0.00084297 -0.18698 -0.00016827 900.43451102251 904.936605184691 112.61 0.35126 112.61 112.45 112.81 7.6294E-06 49 18 4 0 0 0 0.024394 1 65502 29.544 25.028 1 0.84663 0.73322 0 1964000 1074100 889930 40837 1501 15377 15795 64077 64077 YSFGATCVK 9 1 0 Unmodified _YSFGATCVK_ 0 0 0 Q59FL8;Q504U8;E7BSV0;E9PFD7;F2YGG7;Q2TTR7;A9CB80;A8K2T7;P00533;B7Z2I3;A2VCQ7;Q147T7;Q68GS6 Q59FL8 Q59FL8 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 520.7516 2 516.744585 1031.47462 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.421 1 48.421 47.921 48.921 0 0 0 0 0.043105 1 26387 48.794 23.057 1 40838 713 15378 15796 64078 64078 YSFIQALVR 9 0 1 Unmodified _YSFIQALVR_ 0 0 0 Q92621;B4DE72;Q6P486;Q4VBX7;Q6DKH1 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 553.8156 2 548.811116 1095.60768 NaN NaN NaN -0.5706 -0.00031315 NaN NaN NaN NaN 108.42 0.46353 108.42 108.24 108.71 0 0 0 0 0.024092 1 69397 55.676 32.248 1 NaN NaN 0 2009300 0 2009300 40839 1950 15379 15797 64079 64079 YSFLQFDPAPR 11 0 1 Unmodified _YSFLQFDPAPR_ 0 0 0 Q6I9T8;B3KUN1;P67775;B3KQ51;Q8WZ56;Q5U0I7;B3KRM2;A0A140VJS0;P62714;H0YBN9 Q6I9T8 Q6I9T8 PPP2CA;PPP2CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 675.8392 2 670.83532 1339.65609 76381.78 0.73821 0.00049522 -0.25592 -0.00017168 0.4823 0.00032354 670.835023291368 675.839556082854 106.84 0.88585 106.84 106.49 107.38 0 234 67 6 0 0 0 0.00014001 2 66323 112.36 98.766 1 2.0287 2.0483 0 17718000 5663300 12055000 40840 948 15380 15798 64080;64081 64081 YSFLQFDPAPR 11 0 1 Unmodified _YSFLQFDPAPR_ 0 0 0 Q6I9T8;B3KUN1;P67775;B3KQ51;Q8WZ56;Q5U0I7;B3KRM2;A0A140VJS0;P62714;H0YBN9 Q6I9T8 Q6I9T8 PPP2CA;PPP2CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.8397 2 670.83532 1339.65609 75521.6 0.74658 0.00050083 -0.054661 -3.6669E-05 0.69192 0.00046417 670.83506018829 675.839508467403 106.14 0.67686 106.14 105.81 106.48 0 231 50 6 0 0 0 0.00026926 2 67379 107.21 107.21 1 1.773 1.9205 0 27456000 11086000 16370000 40841 948 15380 15798 64082;64083 64082 YSFLQFDPAPR 11 0 1 Unmodified _YSFLQFDPAPR_ 0 0 0 Q6I9T8;B3KUN1;P67775;B3KQ51;Q8WZ56;Q5U0I7;B3KRM2;A0A140VJS0;P62714;H0YBN9 Q6I9T8 Q6I9T8 PPP2CA;PPP2CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 670.8361 2 670.83532 1339.65609 75119.55 0.86116 0.0005777 -0.24798 -0.00016635 0.61318 0.00041134 671.336673188083 675.83930900195 118.04 0.50427 118.04 117.81 118.31 0 93 20 6 0 0 0 0.0058595 2 69598 64.297 64.297 1 0.87513 0.7408 0 4975900 2916000 2059800 40842 948 15380 15798 64084;64085 64084 YSFLQFDPAPR 11 0 1 Unmodified _YSFLQFDPAPR_ 0 0 0 Q6I9T8;B3KUN1;P67775;B3KQ51;Q8WZ56;Q5U0I7;B3KRM2;A0A140VJS0;P62714;H0YBN9 Q6I9T8 Q6I9T8 PPP2CA;PPP2CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 675.8401 2 670.83532 1339.65609 74359.14 0.48921 0.00032818 -0.012015 -8.0603E-06 0.47719 0.00032012 670.835332450726 675.839322067984 117.85 0.45156 117.85 117.62 118.07 7.6294E-06 99 21 8 0 0 0 0.012726 3 68563 57.785 57.785 1 0.78039 0.64918 0 6108200 3295000 2813200 40843 948 15380 15798 64086;64087;64088 64087 YSGAYGASVSDEELK 15 1 0 Unmodified _YSGAYGASVSDEELK_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 788.3628 2 788.362293 1574.71003 68904.88 0.83663 0.00065957 0.040174 3.1671E-05 0.8768 0.00069124 788.362335028278 792.369355967385 56.325 0.62167 56.325 56.063 56.685 3.8147E-06 298 54 8 0 0 0 1.9788E-30 2 31697 154.36 147.23 1 1.1163 1.2204 0 51356000 23932000 27424000 40844 664 15381 15799 64089;64090 64090 YSGAYGASVSDEELK 15 1 0 Unmodified _YSGAYGASVSDEELK_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 792.3688 2 788.362293 1574.71003 69233.52 0.51126 0.00040306 0.11017 8.6851E-05 0.62143 0.00048991 788.362485865388 792.369427952751 55.341 0.7602 55.341 54.881 55.641 3.8147E-06 274 57 9 0 0 0 9.8041E-22 2 31675 138.2 132.34 1 0.96928 1.0909 0 70749000 38559000 32190000 40845 664 15381 15799 64091;64092 64092 YSGAYGASVSDEELK 15 1 0 Unmodified _YSGAYGASVSDEELK_ 0 0 0 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4 A4D1N4 A4D1N4 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 792.3693 2 788.362293 1574.71003 69298.89 0.5899 0.00046505 -0.08834 -6.9644E-05 0.50156 0.00039541 788.36223256806 792.369149528153 66.772 0.57994 66.772 66.57 67.15 0 141 33 6 0 0 0 0.00022691 1 33863 74.46 70.573 1 2.475 2.0313 0 5258800 1638700 3620000 40846 664 15381 15799 64093 64093 YSGELSGIR 9 0 1 Unmodified _YSGELSGIR_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 496.2579 2 491.253631 980.49271 85676.22 0.20635 0.00010137 0.21086 0.00010358 0.4172 0.00020495 491.253645088619 496.257835624341 41.923 0.71794 41.923 41.695 42.413 3.8147E-06 244 53 8 0 0 0 0.00096668 2 22086 91.853 71.333 1 0.92325 1.059 0 136100000 67850000 68255000 40847 2063 15382 15800 64094;64095 64094 YSGELSGIR 9 0 1 Unmodified _YSGELSGIR_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 491.2541 2 491.253631 980.49271 85945.66 0.32739 0.00016083 0.20461 0.00010051 0.53199 0.00026134 491.253611907525 496.257818597459 40.656 0.92213 40.656 40.305 41.227 0 298 73 7 0 0 0 0.012314 1 21727 57.59 42.92 1 1.0486 1.2022 0 82401000 42495000 39906000 40848 2063 15382 15800 64096 64096 YSGELSGIR 9 0 1 Unmodified _YSGELSGIR_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 491.254 2 491.253631 980.49271 87584.29 0.016861 8.2829E-06 0.34974 0.00017181 0.3666 0.00018009 491.253647719613 496.257865515916 48.203 1.267 48.203 47.593 48.86 0 353 91 6 0 0 0 0.046218 2 23451 39.547 30.634 1 1.287 1.1032 0 6149400 2702400 3447000 40849 2063 15382 15800 64097;64098 64098 YSGELSGIR 9 0 1 Unmodified _YSGELSGIR_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 491.2538 2 491.253631 980.49271 86533.62 -0.087382 -4.2927E-05 0.17233 8.4659E-05 0.08495 4.1732E-05 491.253622715663 496.257746787134 48.575 1.1261 48.575 48.043 49.17 0 362 93 5 0 0 0 0.019553 3 23030 51.059 38.022 1 1.2278 1.0243 0 6527000 2888300 3638700 40850 2063 15382 15800 64099;64100;64101 64100 YSGPEDDAAISLAFSK 16 1 0 Unmodified _YSGPEDDAAISLAFSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 839.9072 2 835.899042 1669.78353 66818.71 0.91093 0.00076145 -0.15214 -0.00012717 0.75879 0.00063427 835.899230717972 839.905946615721 98.689 1.9565 98.689 98.002 99.958 0 1020 161 11 0 0 0 6.803E-68 6 60529 188.96 188.96 1 0.77343 0.9291 0 1127100000 632920000 494200000 40851 1471 15383 15801 64102;64103;64104;64105;64106;64107 64104 YSGPEDDAAISLAFSK 16 1 0 Unmodified _YSGPEDDAAISLAFSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 835.9002 2 835.899042 1669.78353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.03 1 98.03 97.53 98.53 0 0 0 0 0.0051021 1 59878 51.875 42.188 1 40852 1471 15383 15801 64108 64108 YSGPEDDAAISLAFSK 16 1 0 Unmodified _YSGPEDDAAISLAFSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 836.4005 2 835.899042 1669.78353 66522.68 0.77698 0.00064948 -0.14518 -0.00012135 0.6318 0.00052812 835.89919989596 839.905990004251 98.028 1.7042 98.028 97.337 99.042 -7.6294E-06 1073 140 12 0 0 0 1.1846E-08 4 61125 105.95 105.95 1 0.74999 0.88569 0 1122300000 629310000 492970000 40853 1471 15383 15801 64109;64110;64111;64112 64110 YSGPEDDAAISLAFSK 16 1 0 Unmodified _YSGPEDDAAISLAFSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 835.9009 2 835.899042 1669.78353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.298 1 95.298 94.798 95.798 0 0 0 0 0.0064167 1 59318 50.222 31.954 1 40854 1471 15383 15801 64113 64113 YSGPEDDAAISLAFSK 16 1 0 Unmodified _YSGPEDDAAISLAFSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 839.9069 2 835.899042 1669.78353 66368.88 0.76973 0.00064342 -0.15149 -0.00012663 0.61824 0.00051679 835.899571163692 839.906075147932 111.53 2.5201 111.53 111.01 113.53 0 697 131 12 0 0 0 3.6394E-06 4 64482 88.552 88.552 1 1.3706 1.2315 0 598400000 251540000 346860000 40855 1471 15383 15801 64114;64115;64116;64117 64114 YSGPEDDAAISLAFSK 16 1 0 Unmodified _YSGPEDDAAISLAFSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 839.9059 2 835.899042 1669.78353 68008.75 0.70159 0.00058645 0.32844 0.00027454 1.03 0.000861 835.898748106271 839.905410593799 109.01 0.44534 109.01 108.77 109.21 0 82 20 7 0 0 0 0.027674 1 61762 24.929 23.88 1 1.4319 1.1527 0 2511100 1004000 1507100 40856 1471 15383 15801 64118 64118 YSGPEDDAAISLAFSK 16 1 0 Unmodified _YSGPEDDAAISLAFSK_ 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 835.8997 2 835.899042 1669.78353 66292.39 0.66133 0.00055281 -0.15358 -0.00012838 0.50775 0.00042443 835.899356372495 839.906002757314 111.46 2.2303 111.46 111.07 113.3 -7.6294E-06 670 117 10 0 0 0 8.1014E-07 4 63811 97.551 97.551 1 1.3207 1.1614 0 675520000 283580000 391940000 40857 1471 15383 15801 64119;64120;64121;64122 64119 YSGSEGSTQTLTK 13 1 0 Unmodified _YSGSEGSTQTLTK_ 0 0 0 P25815 P25815 P25815 S100P Protein S100-P MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 679.8253 2 679.825346 1357.63614 75333.05 0.80308 0.00054595 -0.33347 -0.0002267 0.46961 0.00031925 679.824576341675 684.334302566391 22.663 0.18189 22.663 22.588 22.77 0 20 7 4 0 0 0 0.00015572 2 8654 72.652 42.398 1 1.1274 1.1649 0 4784400 1628200 3156200 40858 1519 15384 15802 64123;64124 64123 YSGSYNDYLR 10 0 1 Unmodified _YSGSYNDYLR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 624.2834 2 619.277835 1236.54112 NaN NaN NaN 0.32909 0.0002038 NaN NaN NaN NaN 54.531 0.53951 54.531 54.283 54.823 0 0 0 0 2.0555E-11 1 30592 125.16 108.96 1 NaN NaN 0 20431000 0 20431000 40859 571 15385 15803 64125 64125 YSGSYNDYLR 10 0 1 Unmodified _YSGSYNDYLR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 624.282 2 619.277835 1236.54112 76566.68 0.49342 0.00030556 0.45546 0.00028206 0.94888 0.00058762 619.278185020106 624.282202200401 53.689 0.63982 53.689 53.322 53.962 -3.8147E-06 230 61 5 0 0 0 2.8565E-08 3 30555 120.15 90.345 1 1.5904 1.696 0 24575000 8829200 15746000 40860 571 15385 15803 64126;64127;64128 64126 YSGSYNDYLR 10 0 1 Unmodified _YSGSYNDYLR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 619.2783 2 619.277835 1236.54112 77957.99 0.3033 0.00018783 0.26927 0.00016675 0.57257 0.00035458 619.278055353195 624.281971190812 64.103 0.65826 64.103 63.792 64.451 0 246 54 6 0 0 0 0.024874 1 32927 44.863 40.251 1 0.95566 0.81172 0 5231000 2611300 2619700 40861 571 15385 15803 64129 64129 YSGSYNDYLR 10 0 1 Unmodified _YSGSYNDYLR_ 0 0 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 624.2826 2 619.277835 1236.54112 76689.77 0.2624 0.0001625 0.14242 8.8197E-05 0.40482 0.00025069 619.277908062884 624.282109393353 64.705 0.5718 64.705 64.492 65.064 0 262 48 8 0 0 0 0.00051176 2 32640 85.676 72.639 1 0.93838 0.80217 0 4510000 2367400 2142600 40862 571 15385 15803 64130;64131 64131 YSGTLNLDR 9 0 1 Unmodified _YSGTLNLDR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 524.7681 2 519.764363 1037.51417 82667.77 0.5803 0.00030162 0.28219 0.00014667 0.86249 0.00044829 519.764574310263 524.768542076675 46.331 0.69363 46.331 45.991 46.684 3.8147E-06 198 60 4 0 0 0 0.0056175 1 24923 66.27 42.315 1 1.4076 1.4561 0 23371000 9615000 13756000 40863 587 15386 15804 64132 64132 YSGTLNLDR 9 0 1 Unmodified _YSGTLNLDR_ 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.7682 2 519.764363 1037.51417 84091.54 0.49355 0.00025653 0.10484 5.4493E-05 0.59839 0.00031102 519.764324836534 524.768581336127 45.389 0.63137 45.389 45.085 45.716 0 201 55 5 0 0 0 0.0019956 1 25015 78.149 49.931 1 1.7146 1.8758 0 34118000 11105000 23012000 40864 587 15386 15804 64133 64133 YSHEVLSEENFK 12 1 0 Unmodified _YSHEVLSEENFK_ 0 0 0 Q7Z2W4;A8K9U6;C9J6P4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 494.5683 3 494.568418 1480.68342 86610.41 0.16755 8.2866E-05 0.26116 0.00012916 0.42871 0.00021203 494.568460854209 497.239958940606 45.456 0.43813 45.456 45.256 45.694 -3.8147E-06 109 38 4 0 0 0 0.006359 1 24454 25.438 24.734 1 1.2454 1.2203 0 21387000 7638500 13748000 40865 1873 15387 15805 64134 64134 YSLDPENPTK 10 1 0 Unmodified _YSLDPENPTK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81;J3KSJ0 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 586.2899 2 582.282586 1162.55062 79020.56 0.37731 0.0002197 -0.10157 -5.9144E-05 0.27574 0.00016056 582.282510435793 586.289553898055 50.626 0.56282 50.626 50.105 50.668 -3.8147E-06 330 54 7 0 0 0 3.5731E-16 2 27782 154.75 143.53 1 0.72703 0.86914 0 824250000 490310000 333930000 40866 106 15388 15806 64135;64136 64136 YSLDPENPTK 10 1 0 Unmodified _YSLDPENPTK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81;J3KSJ0 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 582.2828 2 582.282586 1162.55062 NaN NaN NaN 0.2461 0.0001433 NaN NaN NaN NaN 50.726 0.66194 50.726 50.594 51.256 0 0 0 0 0.000133 1 28256 93.649 81.694 1 NaN NaN 0 401240000 401240000 0 40867 106 15388 15806 64137 64137 YSLDPENPTK 10 1 0 Unmodified _YSLDPENPTK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81;J3KSJ0 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 586.2896 2 582.282586 1162.55062 78536.16 0.72754 0.00042364 -0.13519 -7.8719E-05 0.59235 0.00034492 582.282504764804 586.289541050537 49.659 1.29 49.659 49.055 50.345 0 695 112 9 0 0 0 8.7248E-10 2 27708 134.26 124.87 1 0.73016 0.8612 0 773950000 448970000 324970000 40868 106 15388 15806 64138;64139 64139 YSLDPENPTK 10 1 0 Unmodified _YSLDPENPTK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81;J3KSJ0 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 582.2827 2 582.282586 1162.55062 78536.95 0.46894 0.00027306 -0.064245 -3.7409E-05 0.4047 0.00023565 582.282842970624 586.289514550067 58.6 1.919 58.6 58.202 60.121 3.8147E-06 806 144 12 0 0 0 0.00018192 3 29671 115.86 107.93 1 0.87214 0.77186 0 309670000 165600000 144060000 40869 106 15388 15806 64140;64141;64142 64141 YSLDPENPTK 10 1 0 Unmodified _YSLDPENPTK_ 0 0 0 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81;J3KSJ0 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 586.2903 2 582.282586 1162.55062 79247.35 0.38169 0.00022225 0.072641 4.2298E-05 0.45433 0.00026455 582.282963298582 586.289577232995 59.211 1.5063 59.211 58.792 60.299 -3.8147E-06 860 116 13 0 0 0 0.00078086 2 29517 81.338 75.033 1 0.87425 0.75573 0 224720000 122890000 101830000 40870 106 15388 15806 64143;64144 64144 YSLQNTEESLR 11 0 1 Unmodified _YSLQNTEESLR_ 0 0 0 A0A024R1Q3;Q9NSP4;B1AHQ7;B1AHQ6 A0A024R1Q3 A0A024R1Q3 C22orf18;CENPM Centromere protein M ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 675.3318 2 670.328056 1338.64156 NaN NaN NaN -0.50189 -0.00033643 NaN NaN NaN NaN 56.343 0.40543 56.343 56.157 56.563 0 0 0 0 7.6323E-08 1 32358 107.79 70.06 1 NaN NaN 0 11793000 0 11793000 40871 83 15389 15807 64145 64145 YSLQSANASSLSSGQLK 17 1 0 Unmodified _YSLQSANASSLSSGQLK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 871.4437 2 870.941773 1739.86899 NaN NaN NaN 0.023999 2.0902E-05 NaN NaN NaN NaN 70.069 0.51889 70.069 69.884 70.403 0 0 0 0 1.2853E-06 1 40654 81.565 71.612 1 NaN NaN 0 26008000 26008000 0 40872 878 15390 15808 64146 64146 YSLQSANASSLSSGQLK 17 1 0 Unmodified _YSLQSANASSLSSGQLK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.9492 2 870.941773 1739.86899 65582.7 0.60106 0.00052349 -0.031245 -2.7212E-05 0.56981 0.00049627 870.941873645088 875.450009259994 69.052 0.57423 69.052 68.776 69.351 0 246 48 7 0 0 0 1.5227E-68 3 41054 192.65 192.65 1 0.72426 0.8108 0 54026000 29772000 24254000 40873 878 15390 15808 64147;64148;64149 64148 YSLQSANASSLSSGQLK 17 1 0 Unmodified _YSLQSANASSLSSGQLK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 875.451 2 870.941773 1739.86899 65070.27 0.37757 0.00032884 -0.33667 -0.00029322 0.0409 3.5622E-05 870.941721251115 875.449337914069 80.953 0.66945 80.953 80.621 81.29 7.6294E-06 244 42 9 0 0 0 0.00015324 1 43668 54.524 49.347 1 1.9376 1.524 0 17292000 5714000 11578000 40874 878 15390 15808 64150 64150 YSLQSANASSLSSGQLK 17 1 0 Unmodified _YSLQSANASSLSSGQLK_ 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 871.4427 2 870.941773 1739.86899 65324.46 0.38627 0.00033642 -0.34469 -0.0003002 0.041577 3.6211E-05 870.94187684474 875.449278659074 81.186 0.67538 81.186 80.881 81.556 0 240 40 9 0 0 0 2.2332E-05 4 43061 83.243 83.243 1 2.1731 1.7463 0 17070000 5138700 11932000 40875 878 15390 15808 64151;64152;64153;64154 64154 YSLRDEFPLLTTK 13 1 1 Unmodified _YSLRDEFPLLTTK_ 0 0 1 Q53Y97;Q53FB7;A8K9A5;P04818 Q53Y97 Q53Y97 TYMS Thymidylate synthase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 534.2943 3 528.287363 1581.84026 NaN NaN NaN -0.21394 -0.00011302 NaN NaN NaN NaN 101.74 0.55893 101.74 101.31 101.86 7.6294E-06 0 0 0 0.028875 1 64063 43.184 35.813 1 NaN NaN 0 4616600 0 4616600 40876 782 15391 15809 64155 64155 YSNEDTLSVALPYFWEHFDK 20 1 0 Unmodified _YSNEDTLSVALPYFWEHFDK_ 0 0 0 Q53YD7;P26641;B4DUP0 Q53YD7 Q53YD7 EEF1G Elongation factor 1-gamma MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 824.0563 3 821.04974 2460.12739 69010.55 0.97932 0.00080407 -0.38095 -0.00031278 0.59837 0.00049129 821.382953235575 824.389687148477 127.4 1.1883 127.4 126.87 128.06 -7.6294E-06 235 74 6 0 0 0 0.0015703 1 84980 28.65 28.65 1 2.553 2.5774 0 8188400 2741700 5446600 40877 1522 15392 15810 64156 64156 YSNENLDLAR 10 0 1 Unmodified _YSNENLDLAR_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;A4VCH6;K7ER27 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 602.7949 2 597.791109 1193.56767 80143.38 0.72649 0.00043429 0.25316 0.00015134 0.97965 0.00058563 597.791107085433 602.795299796388 47.269 0.56014 47.269 46.99 47.55 0 135 51 4 0 0 0 1.0331E-09 1 25557 133.57 108.65 1 3.8564 3.9497 0 26127000 6923400 19203000 40878 946 15393 15811 64157 64157 YSNENLDLAR 10 0 1 Unmodified _YSNENLDLAR_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;A4VCH6;K7ER27 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 602.7957 2 597.791109 1193.56767 NaN NaN NaN 0.4732 0.00028288 NaN NaN NaN NaN 46.158 0.51144 46.158 45.921 46.433 0 0 0 0 5.322E-16 1 25403 140.45 119.54 1 NaN NaN 0 29165000 0 29165000 40879 946 15393 15811 64158 64158 YSNENLDLAR 10 0 1 Unmodified _YSNENLDLAR_ 0 0 0 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776;B4DPX0;A4VCH6;K7ER27 K7EJE8 K7EJE8 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 602.7958 2 597.791109 1193.56767 78124.81 0.49571 0.00029633 -0.17907 -0.00010704 0.31664 0.00018929 597.79106342053 602.795132979949 55.042 0.4976 55.042 54.838 55.336 0 84 34 3 0 0 0 0.028741 1 26901 43.308 36.412 1 1.5453 1.3718 0 2383900 505510 1878400 40880 946 15393 15811 64159 64159 YSPTSPTYSPTSPK 14 1 0 Unmodified _YSPTSPTYSPTSPK_ 0 0 0 P24928;B4DET1 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 756.8649 2 756.864471 1511.71439 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.959 1 41.959 41.459 42.459 0 0 0 0 0.031224 1 22591 42.976 28.297 1 40881 1514 15394 15812 64160 64160 YSPTTSHVGA 10 0 0 Unmodified _YSPTTSHVGA_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 510.2434 2 510.243264 1018.47197 NaN NaN NaN 0.1678 8.5619E-05 NaN NaN NaN NaN 24.554 0.51871 24.554 24.364 24.883 0 0 0 0 0.00081423 1 10217 89.369 76.41 1 40882 1792 15395 15813 64161 64161 YSPTTSHVGA 10 0 0 Unmodified _YSPTTSHVGA_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 ISO-MSMS -1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 510.2428 2 510.243264 1018.47197 NaN NaN NaN 0.16161 8.2459E-05 NaN NaN NaN NaN 24.313 0.60262 24.313 24.072 24.675 0 0 0 0 0.002203 1 10002 81.784 71.797 1 40883 1792 15395 15813 64162 64162 YSPTTSHVGA 10 0 0 Unmodified _YSPTTSHVGA_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 510.2431 2 510.243264 1018.47197 NaN NaN NaN -0.38087 -0.00019433 NaN NaN NaN NaN 27.382 0.71334 27.382 27.121 27.835 0 0 0 0 0.016571 1 10532 56.547 52.8 1 40884 1792 15395 15813 64163 64163 YSPTTSHVGA 10 0 0 Unmodified _YSPTTSHVGA_ 0 0 0 Q53T99;Q9GZL7;B4DRY7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 ISO-MSMS -1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 510.2433 2 510.243264 1018.47197 NaN NaN NaN -0.19306 -9.8509E-05 NaN NaN NaN NaN 27.447 0.82514 27.447 27.194 28.019 -1.9073E-06 0 0 0 0.012286 1 10089 60.972 58.135 1 40885 1792 15395 15813 64164 64164 YSQLVVETIR 10 0 1 Unmodified _YSQLVVETIR_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 609.3423 2 604.337695 1206.66084 77314.37 0.68822 0.00041591 0.74838 0.00045227 1.4366 0.00086819 604.338433025754 609.341469093538 75.909 1.3444 75.909 75.472 76.816 0 553 112 7 0 0 0 2.2356E-06 3 44469 111.06 91.27 1 0.85884 1.0161 0 315930000 168410000 147520000 40886 1946 15396 15814 64165;64166;64167 64165 YSQLVVETIR 10 0 1 Unmodified _YSQLVVETIR_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 604.337 2 604.337695 1206.66084 77208.38 0.50776 0.00030686 0.88684 0.00053595 1.3946 0.00084281 604.338398401818 609.341804782963 74.582 1.2436 74.582 74.291 75.535 0 503 110 6 0 0 0 1.4636E-08 3 44784 122.96 103.98 1 0.91982 1.0757 0 617410000 308260000 309150000 40887 1946 15396 15814 64168;64169;64170 64169 YSQLVVETIR 10 0 1 Unmodified _YSQLVVETIR_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 609.3428 2 604.337695 1206.66084 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.374 1 86.374 85.874 86.874 0 0 0 0 2.5505E-05 1 47371 92.538 75.999 1 40888 1946 15396 15814 64171 64171 YSQLVVETIR 10 0 1 Unmodified _YSQLVVETIR_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 609.3422 2 604.337695 1206.66084 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.429 1 86.429 85.929 86.929 0 0 0 0 0.0014288 1 46596 68.847 56.999 1 40889 1946 15396 15814 64172 64172 YSQSDLEQTK 10 1 0 Unmodified _YSQSDLEQTK_ 0 0 0 Q14683;G8JLG1;A8K7A6;Q6P2R1;Q6MZR8;B7Z709 Q14683 Q14683 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein 1A;Structural maintenance of chromosomes protein ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 603.7908 2 599.78295 1197.55135 NaN NaN NaN 0.5809 0.00034841 NaN NaN NaN NaN 27.62 0.44664 27.62 27.476 27.923 0 0 0 0 0.012842 1 10820 60.398 54.134 1 NaN NaN 0 1166300 0 1166300 40890 1739 15397 15815 64173 64173 YSQVLANGLDNK 12 1 0 Unmodified _YSQVLANGLDNK_ 0 0 0 P62269;J3JS69 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 665.3492 2 661.340966 1320.66738 75307.86 0.77539 0.0005128 1.0088 0.00066718 1.7842 0.00118 661.341307534184 665.348838063613 53.363 0.93491 53.363 52.976 53.911 0 359 73 8 0 0 0 3.365E-08 2 29829 140.49 131.16 1 1.0877 1.2434 0 183220000 74619000 108600000 40891 1639 15398 15816 64174;64175 64175 YSQVLANGLDNK 12 1 0 Unmodified _YSQVLANGLDNK_ 0 0 0 P62269;J3JS69 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 665.3485 2 661.340966 1320.66738 74650.47 0.68184 0.00045093 0.16754 0.0001108 0.84938 0.00056173 661.341140290324 665.348131200306 52.053 0.96098 52.053 51.709 52.67 0 425 74 8 0 0 0 2.0025E-08 2 29466 143.24 143.24 1 1.0987 1.2522 0 150670000 73927000 76738000 40892 1639 15398 15816 64176;64177 64177 YSQVLANGLDNK 12 1 0 Unmodified _YSQVLANGLDNK_ 0 0 0 P62269;J3JS69 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.3421 2 661.340966 1320.66738 75585.2 0.53476 0.00035366 0.7127 0.00047134 1.2475 0.000825 661.341141958807 665.348674760862 61.649 1.0973 61.649 61.171 62.268 0 422 89 6 0 0 0 0.00060342 2 31471 68.536 63.222 1 0.93435 0.73813 0 6064700 3089100 2975600 40893 1639 15398 15816 64178;64179 64179 YSQVLANGLDNK 12 1 0 Unmodified _YSQVLANGLDNK_ 0 0 0 P62269;J3JS69 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 665.3484 2 661.340966 1320.66738 75081.83 0.41669 0.00027557 0.51364 0.00033969 0.93032 0.00061526 661.341225519112 665.348449664747 62.262 1.0838 62.262 61.739 62.823 0 412 78 7 0 0 0 0.011514 1 31206 61.577 61.577 1 1.0285 0.84142 0 5500800 2734200 2766700 40894 1639 15398 15816 64180 64180 YSQVLGLGGR 10 0 1 Unmodified _YSQVLGLGGR_ 0 0 0 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;P18887;V9VB20;M4WFF9 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 530.2941 2 525.290548 1048.56654 NaN NaN NaN -0.72324 -0.00037991 NaN NaN NaN NaN 60.171 0.38868 60.171 59.978 60.367 0 0 0 0 4.906E-05 1 34316 101.25 84.713 1 NaN NaN 0 11034000 0 11034000 40895 58 15399 15817 64181 64181 YSQVLGLGGR 10 0 1 Unmodified _YSQVLGLGGR_ 0 0 0 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;P18887;V9VB20;M4WFF9 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.2924 2 525.290548 1048.56654 NaN NaN NaN 0.16668 8.7555E-05 NaN NaN NaN NaN 60.51 0.76048 60.51 60.04 60.801 0 0 0 0 8.8994E-05 1 34354 97.635 81.302 1 NaN NaN 0 107570000 107570000 0 40896 58 15399 15817 64182 64182 YSQVLGLGGR 10 0 1 Unmodified _YSQVLGLGGR_ 0 0 0 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;P18887;V9VB20;M4WFF9 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.2917 2 525.290548 1048.56654 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.943 1 58.943 58.443 59.443 0 0 0 0 0.00024632 1 34284 78.113 64.465 1 40897 58 15399 15817 64183 64183 YSQYLDR 7 0 1 Unmodified _YSQYLDR_ 0 0 0 Q15020;B4DRG9;F8VV04;B4E3R6 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 477.731 2 472.727249 943.439946 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.444 1 28.444 27.944 28.944 1.9073E-06 0 0 0 0.036131 1 13606 71.134 26.727 1 40898 1748 15400 15818 64184 64184 YSSDVQEMILSSATADR 17 0 1 Oxidation (M) _YSSDVQEM(ox)ILSSATADR_ YSSDVQEM(1)ILSSATADR YSSDVQEM(41.09)ILSSATADR 0 1 0 E1NZA1;Q92616;A0A024RBS1 E1NZA1 E1NZA1 PRIC295;GCN1L1 Translational activator GCN1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 949.9384 2 944.933287 1887.85202 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.301 1 82.301 81.801 82.801 0 0 0 0 0.013763 1 49140 41.092 32.362 1 40899 1205 15401 15819 64185 64185 916 YSSEVATESPLDFTK 15 1 0 Unmodified _YSSEVATESPLDFTK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 837.9017 2 837.398875 1672.7832 65376.84 0.76478 0.00064042 0.13626 0.00011411 0.90104 0.00075453 837.398760240002 841.405634904786 88.867 0.59229 88.867 88.508 89.101 0 200 43 6 0 0 0 1.1173E-05 2 53487 92.112 92.112 1 1.049 1.1298 0 40851000 19227000 21625000 40900 780 15402 15820 64186;64187 64187 YSSEVATESPLDFTK 15 1 0 Unmodified _YSSEVATESPLDFTK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 837.902 2 837.398875 1672.7832 66668.04 0.87888 0.00073597 -0.0063527 -5.3198E-06 0.87252 0.00073065 837.901148662343 841.405860260199 87.988 0.55588 87.988 87.674 88.229 -7.6294E-06 211 45 6 0 0 0 0.0002191 1 54133 62.338 62.338 1 1.2651 1.3847 0 40688000 17484000 23204000 40901 780 15402 15820 64188 64188 YSSEVATESPLDFTK 15 1 0 Unmodified _YSSEVATESPLDFTK_ 0 0 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 841.4061 2 837.398875 1672.7832 66407.75 0.51875 0.0004344 -0.099057 -8.2951E-05 0.41969 0.00035145 837.399056134179 841.405703509715 101.47 0.52724 101.47 101.15 101.67 -7.6294E-06 146 32 7 0 0 0 0.0013373 2 56557 48.044 46.533 1 1.4854 1.2142 0 5567600 2339400 3228200 40902 780 15402 15820 64189;64190 64189 YSSSFCTHDR 10 0 1 Unmodified _YSSSFCTHDR_ 0 0 0 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3;K7ES52;K7ERJ1;K7ENW5 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 635.2629 2 630.259119 1258.50368 77076.23 0.42756 0.00026948 -0.30378 -0.00019146 0.12378 7.8014E-05 630.259005224119 635.263196401255 20.161 0.20357 20.161 20.001 20.205 0 21 5 5 0 0 0 4.5895E-06 1 6613 109.29 102.47 1 2.0546 2.1576 0 11787000 3740900 8046300 40903 252 15403 15821 64191 64191 YSSSFCTHDR 10 0 1 Unmodified _YSSSFCTHDR_ 0 0 0 B5BUF9;B5BU32;A0A024R8N6;P04183;K7ERV3;K7ES52;K7ERJ1;K7ENW5 B5BUF9 B5BUF9 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 630.2597 2 630.259119 1258.50368 77680.72 0.56674 0.0003572 -0.37593 -0.00023693 0.19082 0.00012026 630.259073660384 635.263023743541 19.954 0.26122 19.954 19.842 20.103 0 38 10 6 0 0 0 0.0022258 2 6301 70.056 67.05 1 2.1765 2.1915 0 10777000 3633400 7143100 40904 252 15403 15821 64192;64193 64192 YSTPTYTGGQSESHVQSASEDTVTER 26 0 1 Unmodified _YSTPTYTGGQSESHVQSASEDTVTER_ 0 0 0 B4DXX1;B2R713;Q7Z2T5 B4DXX1 B4DXX1 TRMT1L TRMT1-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 940.4219 3 939.75304 2816.23729 64471.49 0.74992 0.00070474 0.019487 1.8313E-05 0.76941 0.00072305 940.421761688365 943.423153970572 47.471 0.33657 47.471 47.292 47.628 0 64 27 4 0 0 0 0.00027232 5 25723 33.265 33.265 1 1.1755 1.1737 0 16621000 5817000 10804000 40905 846 15404 15822 64194;64195;64196;64197;64198 64195 YSTPTYTGGQSESHVQSASEDTVTER 26 0 1 Unmodified _YSTPTYTGGQSESHVQSASEDTVTER_ 0 0 0 B4DXX1;B2R713;Q7Z2T5 B4DXX1 B4DXX1 TRMT1L TRMT1-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 940.4218 3 939.75304 2816.23729 63170.58 0.85167 0.00080036 -0.063579 -5.9749E-05 0.7881 0.00074061 940.422154751411 943.089133497879 46.329 0.42735 46.329 46.044 46.471 0 86 31 6 0 0 0 0.00074974 2 25584 26.766 26.766 1 1.0048 0.99719 0 15997000 8251600 7745300 40906 846 15404 15822 64199;64200 64200 YSTPTYTGGQSESHVQSASEDTVTER 26 0 1 Unmodified _YSTPTYTGGQSESHVQSASEDTVTER_ 0 0 0 B4DXX1;B2R713;Q7Z2T5 B4DXX1 B4DXX1 TRMT1L TRMT1-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 943.4235 3 939.75304 2816.23729 63557.47 0.60697 0.0005704 -0.30694 -0.00028845 0.30002 0.00028195 940.087156200179 943.422204618835 56.436 0.40481 56.436 56.203 56.608 0 119 23 8 0 0 0 0.056141 1 28391 9.2092 9.2092 1 0.76126 0.66105 0 2207800 1120300 1087500 40907 846 15404 15822 64201 64201 YSTPTYTGGQSESHVQSASEDTVTER 26 0 1 Unmodified _YSTPTYTGGQSESHVQSASEDTVTER_ 0 0 0 B4DXX1;B2R713;Q7Z2T5 B4DXX1 B4DXX1 TRMT1L TRMT1-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 943.0892 3 939.75304 2816.23729 63694.16 0.652 0.00061272 -0.56133 -0.00052751 0.090673 8.521E-05 940.087323240514 943.421921407616 57.276 0.38069 57.276 57.065 57.445 0 96 22 7 0 0 0 0.035565 1 28286 13.567 13.567 1 0.73216 0.647 0 2435700 1323200 1112500 40908 846 15404 15822 64202 64202 YSTSGSSGLTTGK 13 1 0 Unmodified _YSTSGSSGLTTGK_ 0 0 0 Q16891;B9A067;B4DQY2;B4DKR1;B4DT20;Q05DN3 Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 623.3018 2 623.301507 1244.58846 76842.34 0.43197 0.00026924 -0.18987 -0.00011835 0.24209 0.0001509 623.301228425704 627.30843889032 23.564 0.53312 23.564 23.316 23.849 0 98 25 8 0 0 0 4.4689E-06 3 9399 107.06 107.06 1 0.78003 0.83793 0 39242000 20426000 18816000 40909 1774 15405 15823 64203;64204;64205 64204 YSTSGSSGLTTGK 13 1 0 Unmodified _YSTSGSSGLTTGK_ 0 0 0 Q16891;B9A067;B4DQY2;B4DKR1;B4DT20;Q05DN3 Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 627.3085 2 623.301507 1244.58846 76655.68 0.29515 0.00018397 -0.4183 -0.00026073 -0.12315 -7.6757E-05 623.300918851777 627.308431138645 23.348 0.55356 23.348 23.017 23.57 0 88 24 7 0 0 0 1.1371E-08 2 9159 113.69 113.69 1 0.98067 0.99383 0 29379000 14269000 15110000 40910 1774 15405 15823 64206;64207 64206 YSTSGSSGLTTGK 13 1 0 Unmodified _YSTSGSSGLTTGK_ 0 0 0 Q16891;B9A067;B4DQY2;B4DKR1;B4DT20;Q05DN3 Q16891 Q16891 IMMT MICOS complex subunit MIC60 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 627.3088 2 623.301507 1244.58846 NaN NaN NaN -0.14903 -9.289E-05 NaN NaN NaN NaN 26.217 0.38156 26.217 25.995 26.377 0 0 0 0 0.030204 1 9801 42.629 39.792 1 NaN NaN 0 1312400 0 1312400 40911 1774 15405 15823 64208 64208 YSTWEPEENILDAR 14 0 1 Unmodified _YSTWEPEENILDAR_ 0 0 0 Q9HC52;C9J6K3;C9JM54 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 866.9064 2 861.902116 1721.78968 65619.54 0.78889 0.00067995 -0.28399 -0.00024478 0.5049 0.00043517 862.403284107431 867.407928190304 98.967 0.62013 98.967 98.733 99.354 7.6294E-06 154 49 5 0 0 0 0.0058425 3 60502 43.084 35.956 1 0.77914 0.78478 0 9403800 5517000 3886800 40912 2052 15406 15824 64209;64210;64211 64210 YSTWEPEENILDAR 14 0 1 Unmodified _YSTWEPEENILDAR_ 0 0 0 Q9HC52;C9J6K3;C9JM54 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 861.903 2 861.902116 1721.78968 NaN NaN NaN -0.17973 -0.00015491 NaN NaN NaN NaN 98.349 0.55234 98.349 98.028 98.58 0 0 0 0 0.017083 1 61438 47.288 41.047 1 NaN NaN 0 11653000 11653000 0 40913 2052 15406 15824 64212 64212 YSTWEPEENILDAR 14 0 1 Unmodified _YSTWEPEENILDAR_ 0 0 0 Q9HC52;C9J6K3;C9JM54 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 867.4102 2 861.902116 1721.78968 64959.48 0.76407 0.00065856 0.83717 0.00072156 1.6012 0.0013801 862.403300255647 866.906924111484 111.7 0.83662 111.7 111.1 111.94 0 169 43 9 0 0 0 0.0047989 2 64725 44.847 44.847 1 1.4038 1.1653 0 10985000 4019300 6966100 40914 2052 15406 15824 64213;64214 64213 YSTWEPEENILDAR 14 0 1 Unmodified _YSTWEPEENILDAR_ 0 0 0 Q9HC52;C9J6K3;C9JM54 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 861.9036 2 861.902116 1721.78968 66667.84 0.46166 0.0003979 0.29567 0.00025484 0.75733 0.00065274 862.403501090339 867.408586480976 111.61 0.95758 111.61 111.15 112.11 -7.6294E-06 184 51 6 0 0 0 0.032814 2 63791 30.331 30.331 1 1.3704 1.1368 0 7779400 3318900 4460500 40915 2052 15406 15824 64215;64216 64216 YSVADIER 8 0 1 Unmodified _YSVADIER_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 481.7449 2 476.740357 951.46616 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.572 1 49.572 49.072 50.072 3.8147E-06 0 0 0 0.031882 1 27903 61.999 31.331 1 40916 696 15407 15825 64217 64217 YSVADIER 8 0 1 Unmodified _YSVADIER_ 0 0 0 A8K031;O14777;Q05DQ6 A8K031 A8K031 KNTC2;NDC80 Kinetochore protein NDC80 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 476.7407 2 476.740357 951.46616 89047.98 0.11192 5.3359E-05 0.10481 4.9969E-05 0.21674 0.00010333 476.740330066147 481.744530026512 58.825 0.60669 58.825 58.503 59.109 0 155 45 4 0 0 0 0.044697 1 29954 45.68 31.523 1 0.9538 0.82079 0 2677800 1477600 1200200 40917 696 15407 15825 64218 64218 YSVDIPLDK 9 1 0 Unmodified _YSVDIPLDK_ 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 525.2792 2 525.279315 1048.54408 82655.87 0.56156 0.00029498 -0.088016 -4.6233E-05 0.47354 0.00024874 525.279270497631 529.286064630219 80.893 1.2333 80.893 80.518 81.752 0 681 107 11 0 0 0 0.00060281 3 48038 96.948 64.593 1 0.82212 0.98809 0 1164100000 611320000 552780000 40918 93 15408 15826 64219;64220;64221 64219 YSVDIPLDK 9 1 0 Unmodified _YSVDIPLDK_ 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 525.2794 2 525.279315 1048.54408 83413.45 0.56266 0.00029555 0.16746 8.7965E-05 0.73012 0.00038352 525.279441321906 529.286224546533 79.908 1.5384 79.908 79.452 80.99 0 658 122 10 0 0 0 0.00010981 2 48523 109.71 64.785 1 0.85613 1.0108 0 1038500000 566570000 471940000 40919 93 15408 15826 64222;64223 64223 YSVDIPLDK 9 1 0 Unmodified _YSVDIPLDK_ 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.2864 2 525.279315 1048.54408 82966.17 0.32391 0.00017015 0.68994 0.00036241 1.0139 0.00053256 525.279438084762 529.286284030276 92.55 1.6247 92.55 91.863 93.488 0 442 95 10 0 0 0 0.0018407 2 51421 80.165 47.811 1 0.8399 0.72469 0 102450000 58320000 44127000 40920 93 15408 15826 64224;64225 64225 YSVDIPLDK 9 1 0 Unmodified _YSVDIPLDK_ 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 529.2864 2 525.279315 1048.54408 82258.58 0.16618 8.7291E-05 0.37618 0.0001976 0.54236 0.00028489 525.279311153213 529.286158614771 92.331 1.7591 92.331 91.997 93.756 0 454 105 10 0 0 0 0.0021437 2 50540 76.221 43.867 1 0.86856 0.73962 0 85950000 45785000 40165000 40921 93 15408 15826 64226;64227 64227 YSVQLLTPANLLAK 14 1 0 Unmodified _YSVQLLTPANLLAK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 765.9482 2 765.948141 1529.88173 70418.9 0.98048 0.000751 0.37638 0.00028829 1.3569 0.0010393 765.948449931116 769.955419983936 118.87 0.64083 118.87 118.55 119.19 7.6294E-06 255 36 10 0 0 0 6.0078E-05 2 76173 91.549 85.578 1 0.79009 0.89577 0 157140000 87112000 70025000 40922 1076 15409 15827 64228;64229 64228 YSVQLLTPANLLAK 14 1 0 Unmodified _YSVQLLTPANLLAK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 765.9487 2 765.948141 1529.88173 70359.56 0.57733 0.0004422 0.20047 0.00015355 0.77779 0.00059575 765.948277191045 769.955334160905 118.34 0.5952 118.34 118.07 118.66 0 257 36 10 0 0 0 3.8815E-05 2 77648 94.791 94.791 1 0.77209 0.86923 0 121960000 68911000 53050000 40923 1076 15409 15827 64230;64231 64231 YSVQLLTPANLLAK 14 1 0 Unmodified _YSVQLLTPANLLAK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 769.9556 2 765.948141 1529.88173 69721.17 0.64262 0.00049221 0.47634 0.00036485 1.119 0.00085707 765.948517330141 769.955564412784 131.17 0.63045 131.17 130.9 131.53 0 187 27 9 0 0 0 0.0013286 2 79543 54.471 54.471 1 1.2102 1.0017 0 44151000 19502000 24649000 40924 1076 15409 15827 64232;64233 64233 YSVQLLTPANLLAK 14 1 0 Unmodified _YSVQLLTPANLLAK_ 0 0 0 B5BUB1;Q9Y265;H7C4G5 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 769.9557 2 765.948141 1529.88173 69339.95 1.064 0.00081493 0.48244 0.00036952 1.5464 0.0011845 765.948544150998 769.955567892009 130.98 0.65903 130.98 130.7 131.36 1.5259E-05 201 30 10 0 0 0 0.00023444 2 78436 64.439 64.439 1 1.1758 0.98462 0 45985000 21318000 24667000 40925 1076 15409 15827 64234;64235 64235 YSVQTADHR 9 0 1 Unmodified _YSVQTADHR_ 0 0 0 B3KTA3;Q16658 B3KTA3 B3KTA3 FSCN1 Fascin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 543.7642 2 538.759612 1075.50467 84544.33 0.43573 0.00023475 0.34434 0.00018552 0.78007 0.00042027 538.759422179571 543.76393470954 17.292 0.42584 17.292 17.047 17.473 0 29 12 5 0 0 0 3.4108E-08 1 4478 146.81 106.71 1 4.07 4.0914 0 9268500 1960700 7307800 40926 942 15410 15828 64236 64236 YSYLQQDLPDNPER 14 0 1 Unmodified _YSYLQQDLPDNPER_ 0 0 0 P14373;A0A140T9Q6;A0A140T9B9;A0A140T9N6;A0A140T9V9;H0Y551 P14373 P14373 TRIM27 Zinc finger protein RFP ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 874.4121 2 869.407566 1736.80058 NaN NaN NaN 1.127 0.00097983 NaN NaN NaN NaN 76.162 0.34564 76.162 75.999 76.345 0 0 0 0 1.3132E-09 1 44863 109.24 89.577 1 NaN NaN 0 5019800 0 5019800 40927 1480 15411 15829 64237 64237 YSYLQQDLPDNPER 14 0 1 Unmodified _YSYLQQDLPDNPER_ 0 0 0 P14373;A0A140T9Q6;A0A140T9B9;A0A140T9N6;A0A140T9V9;H0Y551 P14373 P14373 TRIM27 Zinc finger protein RFP ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 874.9139 2 869.407566 1736.80058 NaN NaN NaN 0.92737 0.00080626 NaN NaN NaN NaN 75.223 0.40784 75.223 75.017 75.425 7.6294E-06 0 0 0 4.9568E-22 1 45320 132.32 115.3 1 NaN NaN 0 6219900 0 6219900 40928 1480 15411 15829 64238 64238 YSYLQQDLPDNPER 14 0 1 Unmodified _YSYLQQDLPDNPER_ 0 0 0 P14373;A0A140T9Q6;A0A140T9B9;A0A140T9N6;A0A140T9V9;H0Y551 P14373 P14373 TRIM27 Zinc finger protein RFP MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 869.4082 2 869.407566 1736.80058 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.347 1 75.347 74.847 75.847 -7.6294E-06 0 0 0 0.00057008 1 45393 81.625 65.995 1 40929 1480 15411 15829 64239 64239 YTAESSDTLCPR 12 0 1 Unmodified _YTAESSDTLCPR_ 0 0 0 A8K5W7;Q9NSE4 A8K5W7 A8K5W7 IARS2 Isoleucine--tRNA ligase, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 705.3157 2 700.311548 1398.60854 NaN NaN NaN -0.96925 -0.00067878 NaN NaN NaN NaN 35.187 0.089878 35.187 35.107 35.197 0 0 0 0 4.1893E-05 1 17919 96.342 91.891 1 NaN NaN 0 3144000 0 3144000 40930 753 15412 15830 64240 64240 YTCGEAPDYDR 11 0 1 Unmodified _YTCGEAPDYDR_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 678.7738 2 673.769516 1345.52448 74536.91 0.28882 0.0001946 -0.090791 -6.1172E-05 0.19803 0.00013343 673.769431260574 678.773653174017 27.106 0.30699 27.106 26.926 27.233 0 67 15 7 0 0 0 0.00038999 2 12308 82.261 82.261 1 2.5903 2.65 0 14546000 4636000 9910300 40931 1503 15413 15831 64241;64242 64241 YTCGEAPDYDR 11 0 1 Unmodified _YTCGEAPDYDR_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 678.7753 2 673.769516 1345.52448 73741.15 0.62873 0.00042362 -0.41287 -0.00027818 0.21585 0.00014544 673.769319913448 678.773491959762 26.71 0.26386 26.71 26.54 26.804 0 55 12 7 0 0 0 2.4269E-05 2 11989 103.26 103.26 1 2.6057 2.7523 0 23490000 7158100 16332000 40932 1503 15413 15831 64243;64244 64243 YTCGEAPDYDR 11 0 1 Unmodified _YTCGEAPDYDR_ 0 0 0 Q6FGJ9;Q59EJ5;P21266;A4UJ43;A0A0A0MTN3 Q6FGJ9 Q6FGJ9 GSTM3 Glutathione S-transferase Mu 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 679.2758 2 673.769516 1345.52448 75770.02 0.59182 0.00039875 -0.69231 -0.00046646 -0.10049 -6.7708E-05 673.76959967936 678.773425096549 31.6 0.29921 31.6 31.42 31.719 1.9073E-06 70 15 7 0 0 0 0.049598 1 12876 34.755 34.755 1 2.1147 1.8312 0 1619000 504060 1114900 40933 1503 15413 15831 64245 64245 YTCSFCGK 8 1 0 Unmodified _YTCSFCGK_ 0 0 0 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3;A6NKH3 C9J4Z3 C9J4Z3 RPL37A;RPL37AP8 60S ribosomal protein L37a;Putative 60S ribosomal protein L37a-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 515.7143 2 511.707145 1021.39974 83901.84 0.36079 0.00018462 -0.68017 -0.00034805 -0.31938 -0.00016343 511.707028696244 515.71405643684 25.551 0.61103 25.551 25.312 25.923 1.9073E-06 171 33 8 0 0 0 0.0053395 2 11035 90.777 87.585 1 0.71798 0.83421 0 249840000 148690000 101150000 40934 1129 15414 15832 64246;64247 64246 YTCSFCGK 8 1 0 Unmodified _YTCSFCGK_ 0 0 0 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3;A6NKH3 C9J4Z3 C9J4Z3 RPL37A;RPL37AP8 60S ribosomal protein L37a;Putative 60S ribosomal protein L37a-like protein MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 515.7141 2 511.707145 1021.39974 81393.46 0.23973 0.00012267 -0.46554 -0.00023822 -0.22581 -0.00011555 511.707094964509 515.714169524098 25.248 0.4593 25.248 25.084 25.543 1.9073E-06 86 17 8 0 0 0 0.0021178 2 10872 102.71 100.03 1 0.74347 0.85688 0 182700000 100500000 82199000 40935 1129 15414 15832 64248;64249 64248 YTCSFCGK 8 1 0 Unmodified _YTCSFCGK_ 0 0 0 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3;A6NKH3 C9J4Z3 C9J4Z3 RPL37A;RPL37AP8 60S ribosomal protein L37a;Putative 60S ribosomal protein L37a-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 515.7141 2 511.707145 1021.39974 73911.4 0.35981 0.00018412 -0.62796 -0.00032133 -0.26815 -0.00013722 511.707113298954 515.714018794251 28.582 0.67273 28.582 28.338 29.011 1.9073E-06 229 45 10 0 0 0 0.010824 2 11393 71.342 68.336 1 0.79517 0.68027 0 70679000 39899000 30780000 40936 1129 15414 15832 64250;64251 64251 YTCSFCGK 8 1 0 Unmodified _YTCSFCGK_ 0 0 0 C9J4Z3;P61513;M0R0A1;Q6P4E4;E9PEL3;M0R2L6;G5E9R3;A6NKH3 C9J4Z3 C9J4Z3 RPL37A;RPL37AP8 60S ribosomal protein L37a;Putative 60S ribosomal protein L37a-like protein MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 511.7071 2 511.707145 1021.39974 83457.67 0.024405 1.2488E-05 -0.53596 -0.00027425 -0.51155 -0.00026177 511.707078859902 515.714162824377 28.813 0.67123 28.813 28.568 29.24 0 214 43 10 0 0 0 0.022432 2 10998 57.177 57.177 1 0.78133 0.64782 0 35166000 20340000 14826000 40937 1129 15414 15832 64252;64253 64253 YTEGVQSLNWTK 12 1 0 Unmodified _YTEGVQSLNWTK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.3612 2 713.354074 1424.69359 71858.95 0.40797 0.00029103 0.078025 5.5659E-05 0.486 0.00034669 713.354059969178 717.361164842601 72.446 1.0561 72.446 72.018 73.074 7.6294E-06 468 79 9 0 0 0 4.3994E-19 2 42447 150.1 150.1 1 0.61356 0.69463 0 152930000 95789000 57140000 40938 2148 15415 15833 64254;64255 64255 YTEGVQSLNWTK 12 1 0 Unmodified _YTEGVQSLNWTK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 717.3616 2 713.354074 1424.69359 72344.98 0.42981 0.0003066 0.18286 0.00013045 0.61267 0.00043705 713.354089339543 717.36123304981 71.233 0.82778 71.233 70.882 71.71 0 402 60 9 0 0 0 7.9735E-23 2 42698 157.78 157.78 1 0.60591 0.70186 0 211130000 131880000 79247000 40939 2148 15415 15833 64256;64257 64257 YTEGVQSLNWTK 12 1 0 Unmodified _YTEGVQSLNWTK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.3616 2 713.354074 1424.69359 71371.29 0.59099 0.00042158 0.23453 0.0001673 0.82552 0.00058889 713.354156821944 717.361194991055 83.021 0.84177 83.021 82.728 83.57 0 348 51 10 0 0 0 1.5281E-08 2 45155 121.9 121.9 1 0.93832 0.78914 0 54149000 28480000 25669000 40940 2148 15415 15833 64258;64259 64259 YTEGVQSLNWTK 12 1 0 Unmodified _YTEGVQSLNWTK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 713.3534 2 713.354074 1424.69359 71656.67 0.67474 0.00048133 -0.011667 -8.3226E-06 0.66308 0.00047301 713.353980208161 717.361010529279 83.244 0.98238 83.244 82.928 83.91 0 323 59 10 0 0 0 1.3083E-05 2 44444 106.62 101.68 1 0.92123 0.77167 0 46276000 23139000 23137000 40941 2148 15415 15833 64260;64261 64260 YTEMDYAR 8 0 1 Oxidation (M) _YTEM(ox)DYAR_ YTEM(1)DYAR YTEM(87.32)DYAR 0 1 0 A0A024RAE1;Q9UKD2 A0A024RAE1 A0A024RAE1 C1orf33;MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 537.7261 2 532.721307 1063.42806 82133.37 0.24049 0.00012811 0.22311 0.00011886 0.4636 0.00024697 532.7214220005 537.725488400851 20.795 0.37026 20.795 20.644 21.014 0 46 15 4 0 0 0 0.0031117 1 7192 87.323 36.357 1 1.3658 1.3632 0 16678000 6775200 9903200 40942 302 15416 15834 64262 64262 218 YTEVFPPTPVRPAFSFYETLR 21 0 2 Unmodified _YTEVFPPTPVRPAFSFYETLR_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 839.766 3 839.765275 2516.274 65500.63 0.87559 0.00073529 -0.72878 -0.000612 0.14681 0.00012328 840.09923451666 846.771083242102 120.93 2.0004 120.93 119.9 121.9 0 482 137 7 0 0 0 2.2115E-07 3 77842 58.997 58.997 1 1.0838 1.1771 0 32741000 17720000 15021000 40943 2038 15417 15835 64263;64264;64265 64264 YTEVFPPTPVRPAFSFYETLR 21 0 2 Unmodified _YTEVFPPTPVRPAFSFYETLR_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.1006 3 839.765275 2516.274 65345.05 1.0312 0.00086597 -0.60671 -0.00050949 0.4245 0.00035648 840.099165778953 846.771104578124 120.13 1.6029 120.13 119.22 120.82 -7.6294E-06 621 116 8 0 0 0 2.0788E-07 3 79362 59.281 59.281 1 1.0395 1.1892 0 46836000 22516000 24320000 40944 2038 15417 15835 64266;64267;64268 64268 YTEVFPPTPVRPAFSFYETLR 21 0 2 Unmodified _YTEVFPPTPVRPAFSFYETLR_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 840.102 3 839.765275 2516.274 65876.57 0.76795 0.0006449 0.52107 0.00043757 1.289 0.0010825 840.099989873712 846.771917090665 131.66 1.4267 131.66 131.11 132.54 0 462 67 9 0 0 0 0.00039541 2 79874 35.389 35.389 1 1.4661 1.2177 0 19080000 6844100 12236000 40945 2038 15417 15835 64269;64270 64270 YTEVFPPTPVRPAFSFYETLR 21 0 2 Unmodified _YTEVFPPTPVRPAFSFYETLR_ 0 0 1 Q9H6R4;B4DF80;A0A0A0MRW6;B3KPN5 Q9H6R4 Q9H6R4 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 840.1 3 839.765275 2516.274 66085.11 0.96118 0.00080716 0.27845 0.00023383 1.2396 0.001041 840.099645083447 846.771941605291 131.47 1.3803 131.47 130.92 132.3 0 333 59 8 0 0 0 0.058367 1 78763 13.321 13.321 1 1.5354 1.4243 0 24075000 9038400 15036000 40946 2038 15417 15835 64271 64271 YTFNEDEGELPEWFVQEEK 19 1 0 Unmodified _YTFNEDEGELPEWFVQEEK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1195.5314 2 1195.02897 2388.04339 56703.18 0.41719 0.00049856 -0.36981 -0.00044193 0.047386 5.6628E-05 1195.52950452431 1199.537134196 117.2 0.43259 117.2 116.99 117.42 0 167 32 6 0 0 0 2.1068E-05 3 74889 61.212 61.212 1 0.81175 0.82825 0 28182000 13357000 14824000 40947 1898 15418 15836 64272;64273;64274 64274 YTFNEDEGELPEWFVQEEK 19 1 0 Unmodified _YTFNEDEGELPEWFVQEEK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1195.53 2 1195.02897 2388.04339 56315.25 -0.066422 -7.9377E-05 0.0047147 5.6341E-06 -0.061708 -7.3742E-05 1195.53022742699 1199.53718965605 116.77 0.44757 116.77 116.55 117 -7.6294E-06 142 27 7 0 0 0 5.1967E-12 2 76433 105.19 105.19 1 0.84844 0.87738 0 33017000 16356000 16661000 40948 1898 15418 15836 64275;64276 64276 YTFNEDEGELPEWFVQEEK 19 1 0 Unmodified _YTFNEDEGELPEWFVQEEK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1195.5304 2 1195.02897 2388.04339 55756.52 0.20986 0.00025079 -0.25448 -0.00030411 -0.044623 -5.3326E-05 1195.5301955062 1199.53721922667 128.94 0.66597 128.94 128.69 129.36 0 171 31 8 0 0 0 0.00019695 2 77890 46.318 46.318 1 1.1496 0.931 0 23881000 10833000 13048000 40949 1898 15418 15836 64277;64278 64278 YTFNEDEGELPEWFVQEEK 19 1 0 Unmodified _YTFNEDEGELPEWFVQEEK_ 0 0 0 Q8IY81;B4DKU3 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1195.5309 2 1195.02897 2388.04339 55544.8 0.44636 0.00053341 -0.29026 -0.00034686 0.1561 0.00018655 1195.53000697338 1199.53717496932 128.79 0.73022 128.79 128.54 129.27 0 148 29 8 0 0 0 3.243E-05 1 76897 54.898 54.898 1 1.1745 0.96211 0 27066000 11847000 15219000 40950 1898 15418 15836 64279 64279 YTHAANTVVYSSNK 14 1 0 Unmodified _YTHAANTVVYSSNK_ 0 0 0 A0A024R333;Q6UXN9 A0A024R333 A0A024R333 TMEM113;WDR82 WD repeat-containing protein 82 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.8887 2 777.880987 1553.74742 73040.34 0.97902 0.00076156 -0.51228 -0.00039849 0.46675 0.00036307 777.880302111543 781.887403353494 23.052 0.16562 23.052 22.979 23.145 -1.9073E-06 36 8 6 0 0 0 0.00023295 1 9016 64.65 58.617 1 1.6422 1.6769 0 4411500 1589200 2822400 40951 128 15419 15837 64280 64280 YTHAANTVVYSSNK 14 1 0 Unmodified _YTHAANTVVYSSNK_ 0 0 0 A0A024R333;Q6UXN9 A0A024R333 A0A024R333 TMEM113;WDR82 WD repeat-containing protein 82 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.8891 2 777.880987 1553.74742 69901.29 0.79948 0.0006219 0.40948 0.00031853 1.209 0.00094043 777.88118552008 781.888320985451 22.658 0.23057 22.658 22.513 22.744 0 25 9 4 0 0 0 8.9628E-05 2 8580 87.001 81.156 1 1.7329 1.7284 0 6462900 2526500 3936400 40952 128 15419 15837 64281;64282 64281 YTIENPR 7 0 1 Unmodified _YTIENPR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 446.7295 2 446.729792 891.445031 90922.45 0.21483 9.5972E-05 0.61378 0.00027419 0.82861 0.00037016 446.729945845919 451.734142061661 28.923 0.24761 28.923 28.776 29.023 0 59 12 7 0 0 0 0.026752 2 13858 86.872 68.182 1 1.5014 1.6137 0 47123000 20022000 27101000 40953 618 15420 15838 64283;64284 64284 YTIENPR 7 0 1 Unmodified _YTIENPR_ 0 0 0 A0A140VK49;Q7KZF4;B2R5U1;B3KU67;Q59FF0;B4E299;I6TRR8 A0A140VK49 A0A140VK49 SND1 Staphylococcal nuclease domain-containing protein 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 451.734 2 446.729792 891.445031 NaN NaN NaN 0.19125 8.5438E-05 NaN NaN NaN NaN 28.157 0.15871 28.157 28.076 28.235 0 0 0 0 0.048801 1 13393 58.917 21.942 1 NaN NaN 0 64243000 0 64243000 40954 618 15420 15838 64285 64285 YTIIPLNK 8 1 0 Unmodified _YTIIPLNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 481.2894 2 481.289485 960.564418 87229.42 0.16026 7.7132E-05 0.24516 0.00011799 0.40542 0.00019512 481.289575127139 485.296556317303 79.075 0.99094 79.075 78.697 79.688 0 494 89 8 0 0 0 0.024045 1 46687 56.122 46.908 1 0.84693 1.0014 0 406190000 211190000 195000000 40955 69 15421 15839 64286 64286 YTIIPLNK 8 1 0 Unmodified _YTIIPLNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 485.2963 2 481.289485 960.564418 87010.16 0.26865 0.0001293 0.053132 2.5572E-05 0.32179 0.00015487 481.289521984654 485.296418109607 77.96 0.97499 77.96 77.541 78.516 -7.6294E-06 442 84 8 0 0 0 0.0078194 2 47004 81.297 67.789 1 0.85153 0.99143 0 244460000 130200000 114260000 40956 69 15421 15839 64287;64288 64288 YTIIPLNK 8 1 0 Unmodified _YTIIPLNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 481.2895 2 481.289485 960.564418 87697.55 0.096857 4.6616E-05 0.21881 0.00010531 0.31567 0.00015193 481.289575333612 485.296605687459 90.011 1.3635 90.011 89.632 90.996 0 468 88 8 0 0 0 0.022274 1 49671 57.281 51.242 1 1.7497 1.4343 0 36415000 13680000 22735000 40957 69 15421 15839 64289 64289 YTIIPLNK 8 1 0 Unmodified _YTIIPLNK_ 0 0 0 A0A024R158;O95347;B7ZLZ7;A8K984;B3KMB1;Q05BV1;Q2KQ72 A0A024R158 A0A024R158 SMC2L1;SMC2 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 485.2964 2 481.289485 960.564418 87160.43 0.12303 5.9215E-05 0.14469 6.9639E-05 0.26773 0.00012885 481.289531794454 485.296563667539 89.871 1.2822 89.871 89.463 90.745 0 401 81 8 0 0 0 0.0077064 1 48828 81.784 70.911 1 1.7486 1.4449 0 31881000 11172000 20709000 40958 69 15421 15839 64290 64290 YTISQEAYDQR 11 0 1 Unmodified _YTISQEAYDQR_ 0 0 0 K7EP07;K7EK42;Q99426 K7EP07 K7EP07 TBCB Tubulin-folding cofactor B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 692.3248 2 687.320231 1372.62591 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.739 1 42.739 42.239 43.239 -3.8147E-06 0 0 0 3.8573E-06 1 22773 96.143 62.88 1 40959 1342 15422 15840 64291 64291 YTLLLGQDENSVIK 14 1 0 Unmodified _YTLLLGQDENSVIK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 801.4404 2 796.930145 1591.84574 68088.27 1.0904 0.00086894 0.39518 0.00031493 1.4855 0.0011839 796.929886856787 800.937330560851 100.9 0.96152 100.9 100.39 101.35 0 448 71 9 0 0 0 0.00017982 2 61816 95.618 95.618 1 1.2353 1.3951 0 138660000 66374000 72283000 40960 2042 15423 15841 64292;64293 64293 YTLLLGQDENSVIK 14 1 0 Unmodified _YTLLLGQDENSVIK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 796.9291 2 796.930145 1591.84574 68056.02 0.83639 0.00066655 0.28882 0.00023017 1.1252 0.00089672 796.929919261403 800.937247207854 100.26 0.95734 100.26 99.609 100.57 0 481 76 9 0 0 0 0.00017135 3 62700 97.452 97.452 1 1.186 1.3406 0 131180000 67617000 63567000 40961 2042 15423 15841 64294;64295;64296 64294 YTLLLGQDENSVIK 14 1 0 Unmodified _YTLLLGQDENSVIK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 797.4329 2 796.930145 1591.84574 67510.09 0.99839 0.00079565 0.12931 0.00010305 1.1277 0.00089869 796.930010943385 800.937196046865 113.23 0.78751 113.23 112.95 113.74 0 248 38 10 0 0 0 2.2539E-05 3 65825 112.13 112.13 1 1.4233 1.1746 0 42437000 17150000 25287000 40962 2042 15423 15841 64297;64298;64299 64299 YTLLLGQDENSVIK 14 1 0 Unmodified _YTLLLGQDENSVIK_ 0 0 0 Q9H8H0;J3QR28 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 797.4323 2 796.930145 1591.84574 67638.58 0.68859 0.00054875 0.37242 0.0002968 1.061 0.00084555 796.930179349385 800.93741000632 113.1 0.8014 113.1 112.75 113.56 0 247 38 10 0 0 0 0.00012138 2 64831 99.215 99.215 1 1.4398 1.1977 0 38689000 16407000 22282000 40963 2042 15423 15841 64300;64301 64301 YTPSQQGVAFNSGAK 15 1 0 Unmodified _YTPSQQGVAFNSGAK_ 0 0 0 B7Z9X2;B4DY36;A0A024R6E3;Q6I9S2;Q13573;G3V4X8;G3V3A4;B4DEG7;Q0D2M5;Q6P151 B7Z9X2 B7Z9X2 SNW1 SNW domain-containing protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 781.8896 2 777.880987 1553.74742 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.055 1 43.055 42.555 43.555 0 0 0 0 0.003374 1 22988 55.04 40.621 1 40964 203 15424 15842 64302 64302 YTPSQQGVAFNSGAK 15 1 0 Unmodified _YTPSQQGVAFNSGAK_ 0 0 0 B7Z9X2;B4DY36;A0A024R6E3;Q6I9S2;Q13573;G3V4X8;G3V3A4;B4DEG7;Q0D2M5;Q6P151 B7Z9X2 B7Z9X2 SNW1 SNW domain-containing protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 781.888 2 777.880987 1553.74742 72009.73 0.81429 0.00063342 -0.08038 -6.2526E-05 0.73391 0.0005709 778.382266359892 781.88762434521 42.411 0.32862 42.411 42.245 42.573 0 78 25 6 0 0 0 5.0325E-07 2 22831 102.4 82.639 1 1.66 1.6549 0 6425300 2230600 4194700 40965 203 15424 15842 64303;64304 64303 YTPSQQGVAFNSGAK 15 1 0 Unmodified _YTPSQQGVAFNSGAK_ 0 0 0 B7Z9X2;B4DY36;A0A024R6E3;Q6I9S2;Q13573;G3V4X8;G3V3A4;B4DEG7;Q0D2M5;Q6P151 B7Z9X2 B7Z9X2 SNW1 SNW domain-containing protein 1 MSMS 0 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 777.8811 2 777.880987 1553.74742 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.151 1 50.151 49.651 50.651 0 0 0 0 0.028432 1 24567 42.475 22.713 1 40966 203 15424 15842 64305 64305 YTPVQQGPVGVNVTYGGDPIPK 22 1 0 Unmodified _YTPVQQGPVGVNVTYGGDPIPK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1147.5968 2 1143.59188 2285.1692 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.437 1 97.437 96.937 97.937 7.6294E-06 0 0 0 0.0082654 1 59444 42.568 35.84 1 40967 1504 15425 15843 64306 64306 YTPVQQGPVGVNVTYGGDPIPK 22 1 0 Unmodified _YTPVQQGPVGVNVTYGGDPIPK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1147.5986 2 1143.59188 2285.1692 58937.8 0.56735 0.00064881 -0.28223 -0.00032276 0.28511 0.00032605 1144.0930244567 1148.10026228167 96.966 0.47552 96.966 96.731 97.207 -7.6294E-06 206 37 8 0 0 0 3.7033E-08 2 60421 71.08 71.08 1 1.6411 1.7041 0 24676000 10425000 14251000 40968 1504 15425 15843 64307;64308 64307 YTPVQQGPVGVNVTYGGDPIPK 22 1 0 Unmodified _YTPVQQGPVGVNVTYGGDPIPK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 1148.1001 2 1143.59188 2285.1692 56977.72 0.17789 0.00020344 0.037966 4.3417E-05 0.21586 0.00024685 1144.09369735874 1147.59894191575 110.5 0.38036 110.5 110.3 110.68 7.6294E-06 113 19 9 0 0 0 1.2922E-05 1 63809 47.545 47.545 1 3.2614 2.5959 0 9890100 2077000 7813000 40969 1504 15425 15843 64309 64309 YTPVQQGPVGVNVTYGGDPIPK 22 1 0 Unmodified _YTPVQQGPVGVNVTYGGDPIPK_ 0 0 0 P21333;Q5HY54;Q60FE6;Q60FE5;A6NDY9;A0A087WWY3 P21333 P21333 FLNA Filamin-A MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 1147.5995 2 1143.59188 2285.1692 56462.67 0.27389 0.00031322 -0.043143 -4.9338E-05 0.23075 0.00026388 1144.59478182013 1147.5988782421 110.4 0.40897 110.4 110.17 110.58 0 133 22 9 0 0 0 6.3881E-05 1 62767 39.143 39.143 1 3.541 2.9041 0 8879600 1854000 7025600 40970 1504 15425 15843 64310 64310 YTQGGLENLELSR 13 0 1 Unmodified _YTQGGLENLELSR_ 0 0 0 Q53HG5;A8K4K9;Q15006 Q53HG5 Q53HG5 EMC2 ER membrane protein complex subunit 2 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 740.3757 2 740.375537 1478.73652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.456 1 76.456 75.956 76.956 0 0 0 0 0.0013831 1 45071 73.951 64.264 1 40971 736 15426 15844 64311 64311 YTQPNICR 8 0 1 Unmodified _YTQPNICR_ 0 0 0 Q14566;Q4ZG57 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 531.2573 2 526.253108 1050.49166 84876.65 0.081954 4.3129E-05 0.22406 0.00011791 0.30601 0.00016104 526.253371326562 531.257420490197 32.723 0.22474 32.723 32.616 32.841 0 47 11 6 0 0 0 0.032434 1 14200 50.632 41.044 1 0.92842 0.80561 0 2141500 1098500 1043000 40972 1734 15427 15845 64312 64312 YTQQIIQGIQQLVK 14 1 0 Unmodified _YTQQIIQGIQQLVK_ 0 0 0 Q8TCS8 Q8TCS8 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 834.4859 2 830.475054 1658.93556 NaN NaN NaN 1.3895 0.001154 NaN NaN NaN NaN 126.78 0.31046 126.78 126.63 126.94 0 0 0 0 0.03177 1 76376 41.399 35.159 1 NaN NaN 0 553120 0 553120 40973 1931 15428 15846 64313 64313 YTQSNSVCYAK 11 1 0 Unmodified _YTQSNSVCYAK_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06;H7C1S2 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 664.8053 2 660.798077 1319.5816 73665.91 0.88539 0.00058506 -0.23678 -0.00015646 0.64861 0.0004286 660.797586755769 664.805206626218 23.044 0.29705 23.044 22.887 23.184 0 40 15 5 0 0 0 0.0018904 1 9079 64.04 59.589 1 3.4284 3.5056 0 4363800 1423500 2940300 40974 852 15429 15847 64314 64314 YTQSNSVCYAK 11 1 0 Unmodified _YTQSNSVCYAK_ 0 0 0 V9HWH7;B2R7P8;P31939;B4DP06;H7C1S2 V9HWH7 V9HWH7 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 664.8057 2 660.798077 1319.5816 76551.95 0.11414 7.5421E-05 0.40594 0.00026825 0.52008 0.00034367 660.797916863234 664.805508206799 22.84 0.29115 22.84 22.674 22.965 0 34 12 5 0 0 0 0.00090132 1 8750 71.614 67.162 1 4.1975 4.52 0 3716300 1037900 2678400 40975 852 15429 15847 64315 64315 YTQVGPDHNR 10 0 1 Unmodified _YTQVGPDHNR_ 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 598.788 2 593.783619 1185.55268 76846.67 0.57502 0.00034144 0.06775 4.0229E-05 0.64277 0.00038167 593.783669134352 598.787824867813 15.651 0.39694 15.651 15.484 15.881 0 122 26 8 0 0 0 1.0498E-06 1 3210 111.95 107.05 1 1.2602 1.2866 0 30949000 14171000 16778000 40976 1691 15430 15848 64316 64316 YTRPTPVQK 9 1 1 Unmodified _YTRPTPVQK_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 554.3175 2 545.306198 1088.59784 81903.59 0.31818 0.00017351 -0.069603 -3.7955E-05 0.24858 0.00013555 545.306112544336 554.317405853578 17.328 0.41571 17.328 17.143 17.558 -1.9073E-06 59 13 7 0 0 0 5.1122E-07 2 4474 140.11 96.304 1 1.6003 1.9137 0 54621000 19871000 34749000 40977 522 15431 15849 64317;64318 64317 YTRPTPVQK 9 1 1 Unmodified _YTRPTPVQK_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 363.873 3 363.873224 1088.59784 99905.48 -0.14824 -5.394E-05 -0.026399 -9.6057E-06 -0.17464 -6.3546E-05 363.873255767696 369.880703395363 17.327 0.3926 17.327 17.143 17.535 1.9073E-06 57 12 7 0 0 0 0.001932 1 4509 57.032 41.824 1 1.4603 1.7178 0 33750000 13298000 20452000 40978 522 15431 15849 64319 64319 YTRPTPVQK 9 1 1 Unmodified _YTRPTPVQK_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 545.3066 2 545.306198 1088.59784 80503.42 0.42462 0.00023155 -0.012209 -6.6577E-06 0.41241 0.00022489 545.306217647278 554.317338191443 17.261 0.41707 17.261 17.096 17.513 0 62 12 8 0 0 0 4.6303E-11 2 4218 156.46 110.78 1 1.438 1.6935 0 89512000 36347000 53165000 40979 522 15431 15849 64320;64321 64321 YTRPTPVQK 9 1 1 Unmodified _YTRPTPVQK_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 363.8734 3 363.873224 1088.59784 98728.95 0.081981 2.9831E-05 0.062574 2.2769E-05 0.14455 5.26E-05 363.873189399738 369.880812000351 17.256 0.53948 17.256 17.064 17.604 0 60 17 7 0 0 0 0.00058346 1 4221 74.165 55.903 1 1.6152 1.8758 0 38068000 14942000 23126000 40980 522 15431 15849 64322 64322 YTRPTPVQK 9 1 1 Unmodified _YTRPTPVQK_ 0 0 1 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;A0A024R9A4;O15523;B4DLU5;B4E010;C9J8G5;C9J081;B4E3C4 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 554.3175 2 545.306198 1088.59784 81487.41 0.10087 5.5008E-05 0.2194 0.00011964 0.32028 0.00017465 545.306348240957 554.317440994662 18.233 0.30704 18.233 18.111 18.418 -1.9073E-06 97 20 8 0 0 0 0.03635 1 3897 63.419 29.622 1 1.2022 1.0092 0 4948700 2272600 2676100 40981 522 15431 15849 64323 64323 YTTPEDATPEPGEDPR 16 0 1 Unmodified _YTTPEDATPEPGEDPR_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;B0AZR9;Q14455;A0A0A0MR13;O60726 Q5FWY2 Q5FWY2 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 888.3945 2 887.891945 1773.76934 65748.09 0.59678 0.00052988 0.13824 0.00012275 0.73503 0.00065263 887.89198786947 892.896368674839 44.895 0.4233 44.895 44.729 45.152 0 137 38 5 0 0 0 0.0021592 3 24155 42.095 39.363 1 1.6044 1.6035 0 16522000 5951300 10570000 40982 549 15432 15850 64324;64325;64326 64326 YTTPEDATPEPGEDPR 16 0 1 Unmodified _YTTPEDATPEPGEDPR_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;B0AZR9;Q14455;A0A0A0MR13;O60726 Q5FWY2 Q5FWY2 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 892.8969 2 887.891945 1773.76934 65676.26 0.77142 0.00068493 0.22923 0.00020353 1.0006 0.00088846 888.393493403459 893.397731145336 44.052 0.45012 44.052 43.842 44.292 0 149 40 6 0 0 0 0.0021592 1 23928 42.095 38.078 1 1.7824 1.8512 0 22021000 8485100 13536000 40983 549 15432 15850 64327 64327 YTTPEDATPEPGEDPR 16 0 1 Unmodified _YTTPEDATPEPGEDPR_ 0 0 0 Q5FWY2;A0A0S2Z3S5;A0A0S2Z3H8;P63092;Q5JWF2;B0AZR9;Q14455;A0A0A0MR13;O60726 Q5FWY2 Q5FWY2 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 893.3969 2 887.891945 1773.76934 64168.04 0.29829 0.00026485 0.36523 0.00032428 0.66352 0.00058913 887.892577829789 892.896338870666 52.572 0.50438 52.572 52.336 52.84 0 188 38 7 0 0 0 0.060528 1 25925 22.198 22.198 1 1.2784 1.1087 0 2463900 1125700 1338200 40984 549 15432 15850 64328 64328 YTVENGYSTSAK 12 1 0 Unmodified _YTVENGYSTSAK_ 0 0 0 M0QZR8;Q59FA0;A0A024R4F4;M0R2B7;P28340;Q308M6 M0QZR8 M0QZR8 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 660.8109 2 660.309332 1318.60411 NaN NaN NaN 0.16456 0.00010866 NaN NaN NaN NaN 28.864 0.15102 28.864 28.809 28.96 0 0 0 0 0.031007 1 13817 47.187 38.967 1 NaN NaN 0 2649200 2649200 0 40985 155 15433 15851 64329 64329 YTVPGYR 7 0 1 Unmodified _YTVPGYR_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 428.2217 2 428.221603 854.428653 91164.49 0.15645 6.6995E-05 -0.68512 -0.00029338 -0.52867 -0.00022639 428.22145118636 433.224995945111 42.657 0.93461 42.657 42.29 43.225 0 272 74 5 0 0 0 0.031504 1 22710 67.035 42.036 1 0.84857 0.92877 0 52794000 27940000 24853000 40986 125 15434 15852 64330 64330 YTVPGYR 7 0 1 Unmodified _YTVPGYR_ 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 428.2219 2 428.221603 854.428653 92591.48 -0.57102 -0.00024452 0.25157 0.00010773 -0.31944 -0.00013679 428.221713167095 433.225540319549 50.229 0.82591 50.229 49.851 50.677 0 373 69 7 0 0 0 0.034211 1 24079 62.715 46.548 1 1.1645 0.95898 0 8432400 4075100 4357300 40987 125 15434 15852 64331 64331 YTVQDESHSEWVSCVR 16 0 1 Unmodified _YTVQDESHSEWVSCVR_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6RFX4;B4DVD2;D6RBD0;D6RFZ9 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 664.9658 3 661.29514 1980.86359 77940.83 0.32931 0.00021777 0.070091 4.6351E-05 0.3994 0.00026412 661.629994811565 664.965714343301 70.335 0.43793 70.335 70.117 70.555 0 110 28 6 0 0 0 0.0055909 2 36936 29.618 29.596 1 1.8585 1.5602 0 4238500 1677700 2560800 40988 1227 15435 15853 64332;64333 64332 YTVQDESHSEWVSCVR 16 0 1 Unmodified _YTVQDESHSEWVSCVR_ 0 0 0 E9KL35;P63244;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9Z1;H0YAM7;D6R9L0;D6RFX4;B4DVD2;D6RBD0;D6RFZ9 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 664.9672 3 661.29514 1980.86359 76079.45 0.20212 0.00013366 0.22194 0.00014677 0.42407 0.00028043 661.295053985656 664.631017415137 70.89 0.49976 70.89 70.611 71.111 0 168 39 7 0 0 0 0.0088769 1 36479 24.353 24.286 1 1.7431 1.5415 0 3987500 1581400 2406000 40989 1227 15435 15853 64334 64334 YVALVQEK 8 1 0 Unmodified _YVALVQEK_ 0 0 0 P53618 P53618 P53618 COPB1 Coatomer subunit beta MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 479.2786 2 475.271293 948.528032 89872.88 0.11986 5.6967E-05 0.17611 8.3698E-05 0.29597 0.00014067 475.270857693052 479.278790753157 43.191 0.33565 43.191 42.985 43.321 0 71 24 5 0 0 0 0.015121 1 23025 61.962 32.586 1 1.1789 1.157 0 8792300 4308400 4483900 40990 1606 15436 15854 64335 64335 YVANLFPYK 9 1 0 Unmodified _YVANLFPYK_ 0 0 0 V9HWB5;Q15181;Q5SQT6 V9HWB5 V9HWB5 HEL-S-66p;PPA1 Inorganic pyrophosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 561.8079 2 557.800217 1113.58588 NaN NaN NaN 0.041909 2.3377E-05 NaN NaN NaN NaN 88.689 0.33718 88.689 88.426 88.763 0 0 0 0 0.015184 1 53363 62.659 0 1 NaN NaN 0 5511100 0 5511100 40991 1755 15437 15855 64336 64336 YVANLFPYK 9 1 0 Unmodified _YVANLFPYK_ 0 0 0 V9HWB5;Q15181;Q5SQT6 V9HWB5 V9HWB5 HEL-S-66p;PPA1 Inorganic pyrophosphatase ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 561.8071 2 557.800217 1113.58588 NaN NaN NaN 0.27907 0.00015567 NaN NaN NaN NaN 87.461 0.25446 87.461 87.323 87.578 0 0 0 0 0.026661 1 53834 54.549 0 1 NaN NaN 0 6027100 0 6027100 40992 1755 15437 15855 64337 64337 YVASAVFGVIGSQK 14 1 0 Unmodified _YVASAVFGVIGSQK_ 0 0 0 Q5TDG3;Q9UNX4;Q6PDA5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 717.3973 2 713.390459 1424.76637 71480.87 0.72471 0.000517 0.66888 0.00047717 1.3936 0.00099417 713.390568519303 717.39795048617 99.936 0.97514 99.936 99.389 100.36 0 412 84 8 0 0 0 1.6573E-05 2 60973 98.182 88.44 1 0.90974 1.0214 0 67947000 40528000 27419000 40993 1827 15438 15856 64338;64339 64338 YVASAVFGVIGSQK 14 1 0 Unmodified _YVASAVFGVIGSQK_ 0 0 0 Q5TDG3;Q9UNX4;Q6PDA5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 713.3947 2 713.390459 1424.76637 70982.74 0.72884 0.00051994 0.38148 0.00027215 1.1103 0.00079209 713.390509959231 717.397818830648 99.064 1.0037 99.064 98.593 99.597 0 428 83 8 0 0 0 3.3952E-09 2 61833 112.94 105.21 1 0.94448 1.0568 0 84625000 40940000 43685000 40994 1827 15438 15856 64340;64341 64341 YVASAVFGVIGSQK 14 1 0 Unmodified _YVASAVFGVIGSQK_ 0 0 0 Q5TDG3;Q9UNX4;Q6PDA5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 717.8995 2 713.390459 1424.76637 71277.67 1.0094 0.0007201 -0.21162 -0.00015097 0.79778 0.00056913 713.390039273175 717.39749530391 112.37 0.84673 112.37 112.13 112.98 0 220 43 9 0 0 0 0.0013992 2 65140 53.967 53.967 1 1.373 1.117 0 30172000 12159000 18013000 40995 1827 15438 15856 64342;64343 64342 YVASAVFGVIGSQK 14 1 0 Unmodified _YVASAVFGVIGSQK_ 0 0 0 Q5TDG3;Q9UNX4;Q6PDA5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 717.3978 2 713.390459 1424.76637 71560.28 0.70307 0.00050157 0.11836 8.4436E-05 0.82143 0.000586 713.390246975847 717.397735720589 112.21 0.86405 112.21 111.89 112.75 0 225 45 10 0 0 0 3.0212E-05 2 64087 96.103 96.103 1 1.2866 1.0661 0 34474000 14653000 19821000 40996 1827 15438 15856 64344;64345 64344 YVASYLLAALGGNSSPSAK 19 1 0 Unmodified _YVASYLLAALGGNSSPSAK_ 0 0 0 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 938.9991 2 934.991266 1867.96798 63058.72 0.8588 0.00080297 -0.068515 -6.4061E-05 0.79028 0.00073891 935.492651042146 938.998281228389 117.03 1.0841 117.03 116.54 117.63 -7.6294E-06 463 76 9 0 0 0 3.617E-51 2 74706 170.79 170.79 1 0.71509 0.80766 0 139270000 80672000 58602000 40997 356 15439 15857 64346;64347 64347 YVASYLLAALGGNSSPSAK 19 1 0 Unmodified _YVASYLLAALGGNSSPSAK_ 0 0 0 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 934.9908 2 934.991266 1867.96798 63253.37 0.68843 0.00064368 0.16557 0.0001548 0.854 0.00079848 935.492867544126 939.499944908884 116.49 0.87908 116.49 116.16 117.04 0 417 54 12 0 0 0 1.0992E-17 2 76039 124.47 124.47 1 0.72369 0.8422 0 241290000 137140000 104150000 40998 356 15439 15857 64348;64349 64349 YVASYLLAALGGNSSPSAK 19 1 0 Unmodified _YVASYLLAALGGNSSPSAK_ 0 0 0 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 935.4952 2 934.991266 1867.96798 62207.56 0.81713 0.00076401 0.06386 5.9709E-05 0.88099 0.00082372 935.492798144204 939.499962076055 129.08 0.79677 129.08 128.78 129.58 0 223 37 8 0 0 0 0.00013867 1 77922 47.532 47.532 1 0.56117 0.45683 0 31081000 19819000 11262000 40999 356 15439 15857 64350 64350 YVASYLLAALGGNSSPSAK 19 1 0 Unmodified _YVASYLLAALGGNSSPSAK_ 0 0 0 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 938.9999 2 934.991266 1867.96798 62141.38 0.84703 0.00079197 0.0083313 7.7897E-06 0.85536 0.00079976 935.492911169681 938.998627857897 128.77 1.1599 128.77 128.37 129.53 0 260 49 11 0 0 0 5.2118E-30 2 76938 138.97 138.97 1 0.6015 0.49931 0 36396000 19363000 17033000 41000 356 15439 15857 64351;64352 64352 YVATLGVEVHPLVFHTNR 18 0 1 Unmodified _YVATLGVEVHPLVFHTNR_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6;Q96QB7;Q0EFC9 B5MDF5 B5MDF5 RAN;TC4 GTP-binding nuclear protein Ran MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 688.3762 3 684.705691 2051.09524 73865.34 0.61231 0.00041925 -0.17952 -0.00012292 0.43279 0.00029634 685.03989896877 688.041520927097 104.38 0.6304 104.38 104.17 104.8 0 234 39 8 0 0 0 9.7248E-05 2 59403 46.621 46.621 1 1.2725 1.0406 0 13671000 6448400 7222900 41001 1082 15440 15858 64353;64354 64353 YVATLGVEVHPLVFHTNR 18 0 1 Unmodified _YVATLGVEVHPLVFHTNR_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6;Q96QB7;Q0EFC9 B5MDF5 B5MDF5 RAN;TC4 GTP-binding nuclear protein Ran MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 514.0323 4 513.781088 2051.09524 84563.64 0.48847 0.00025096 -0.3881 -0.0001994 0.10037 5.1568E-05 514.031639341875 516.533765351413 104.38 0.80353 104.38 104.18 104.99 0 286 49 9 0 0 0 0.012076 2 59451 26.808 26.808 1 1.0543 0.86362 0 16577000 7035500 9541900 41002 1082 15440 15858 64355;64356 64356 YVATLGVEVHPLVFHTNR 18 0 1 Unmodified _YVATLGVEVHPLVFHTNR_ 0 0 0 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6;Q96QB7;Q0EFC9 B5MDF5 B5MDF5 RAN;TC4 GTP-binding nuclear protein Ran MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 514.0325 4 513.781088 2051.09524 84353.17 0.18902 9.7115E-05 -0.13769 -7.0741E-05 0.051334 2.6374E-05 514.031918623455 516.533906976984 103.85 0.87842 103.85 103.48 104.36 0 275 58 10 0 0 0 0.057148 1 58228 23.87 23.87 1 1.0382 0.85693 0 14475000 6855100 7619700 41003 1082 15440 15858 64357 64357 YVAVMPPHIGDQPLTGAYTVTLDGR 25 0 1 Oxidation (M) _YVAVM(ox)PPHIGDQPLTGAYTVTLDGR_ YVAVM(1)PPHIGDQPLTGAYTVTLDGR YVAVM(57.58)PPHIGDQPLTGAYTVTLDGR 0 1 0 V9HWI1;P30043 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 900.1251 3 896.454772 2686.34249 63115.19 1.1335 0.0010161 -0.54852 -0.00049172 0.58499 0.00052441 896.789424128905 900.45718797258 108.59 0.46893 108.59 108.33 108.8 7.6294E-06 188 33 8 0 0 0 9.0747E-10 1 67758 57.578 57.578 1 3.8362 3.9232 0 31576000 4742600 26833000 41004 1528 15441 15859 64358 64358 1296 YVAVMPPHIGDQPLTGAYTVTLDGR 25 0 1 Oxidation (M) _YVAVM(ox)PPHIGDQPLTGAYTVTLDGR_ YVAVM(1)PPHIGDQPLTGAYTVTLDGR YVAVM(67.22)PPHIGDQPLTGAYTVTLDGR 0 1 0 V9HWI1;P30043 V9HWI1 V9HWI1 HEL-S-10;BLVRB Flavin reductase (NADPH) MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 900.4561 3 896.454772 2686.34249 62668.02 0.70689 0.0006337 -0.21573 -0.00019339 0.49116 0.0004403 897.123534432544 900.125274266043 107.96 0.55484 107.96 107.67 108.23 0 190 39 7 0 0 0 2.2955E-12 1 68936 67.217 67.217 1 2.9169 3.0522 0 22662000 5530900 17131000 41005 1528 15441 15859 64359 64359 1296 YVAVPACEHVFIWDLR 16 0 1 Unmodified _YVAVPACEHVFIWDLR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 662.6723 3 659.001339 1973.98219 74576.87 0.902 0.00059442 -0.056322 -3.7116E-05 0.84568 0.0005573 659.001443828302 662.337451398963 113.32 0.74745 113.32 112.98 113.73 -7.6294E-06 274 54 8 0 0 0 0.021716 1 71593 21.534 21.534 1 0.69666 0.70912 0 18507000 9678100 8828700 41006 1827 15442 15860 64360 64360 YVAVPACEHVFIWDLR 16 0 1 Unmodified _YVAVPACEHVFIWDLR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 662.3383 3 659.001339 1973.98219 73960.22 0.73769 0.00048614 -0.24065 -0.00015859 0.49704 0.00032755 659.335506642395 662.671585106787 112.48 0.56776 112.48 112.19 112.75 7.6294E-06 241 41 8 0 0 0 6.4002E-05 4 72715 59.513 59.513 1 0.68005 0.72194 0 24016000 12231000 11784000 41007 1827 15442 15860 64361;64362;64363;64364 64361 YVAVPACEHVFIWDLR 16 0 1 Unmodified _YVAVPACEHVFIWDLR_ 0 0 0 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 662.338 3 659.001339 1973.98219 74172.16 0.91203 0.00060103 -0.028046 -1.8483E-05 0.88399 0.00058255 659.335718149105 662.337292757054 123.52 0.68809 123.52 123.28 123.97 7.6294E-06 162 28 10 0 0 0 0.00011852 1 73885 51.265 45.455 1 0.94066 0.76898 0 13823000 6734500 7088500 41008 1827 15442 15860 64365 64365 YVDIAIPCNNK 11 1 0 Unmodified _YVDIAIPCNNK_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 657.8337 2 653.826637 1305.63872 73846.63 0.64245 0.00042005 -0.15175 -9.9216E-05 0.49071 0.00032084 653.826255693077 657.833737341003 70.171 1.002 70.171 69.819 70.821 0 348 81 5 0 0 0 2.8403E-05 3 41683 101.64 101.64 1 1.54 1.7205 0 88904000 36041000 52863000 41009 119 15443 15861 64366;64367;64368 64366 YVDIAIPCNNK 11 1 0 Unmodified _YVDIAIPCNNK_ 0 0 0 C9J9K3;A0A024R2P0;A0A0C4DG17;P08865;A0A024R7P5 C9J9K3 C9J9K3 RPSA;LOC388524 40S ribosomal protein SA ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 657.833 2 653.826637 1305.63872 NaN NaN NaN -0.11818 -7.7267E-05 NaN NaN NaN NaN 81.592 1.0112 81.592 81.2 82.211 0 0 0 0 0.011832 1 44109 56.81 49.161 1 NaN NaN 0 3995500 0 3995500 41010 119 15443 15861 64369 64369 YVDIGVLASDLQR 13 0 1 Unmodified _YVDIGVLASDLQR_ 0 0 0 B4DLM8;O15381;A0JLP9;E9PH71;F8WF01;B4DF43;E9PGD8;E7EWK7 B4DLM8 B4DLM8 NVL Nuclear valosin-containing protein-like ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 729.8951 2 724.890823 1447.76709 NaN NaN NaN 0.342 0.00024791 NaN NaN NaN NaN 111 0.32404 111 110.88 111.21 0 0 0 0 1.3219E-05 1 69801 96.015 75.686 1 NaN NaN 0 9943000 0 9943000 41011 997 15444 15862 64370 64370 YVENPSQVLNCER 13 0 1 Unmodified _YVENPSQVLNCER_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 804.879 2 804.377754 1606.74096 70322.95 0.61985 0.00049859 0.24204 0.00019469 0.86189 0.00069328 804.879699344544 809.382115918898 66.218 0.44068 66.218 66.025 66.465 -7.6294E-06 79 39 4 0 0 0 0.0044503 1 38113 48.44 48.44 1 1.1393 1.195 0 11037000 4281100 6756200 41012 39 15445 15863 64371 64371 YVENPSQVLNCER 13 0 1 Unmodified _YVENPSQVLNCER_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 804.3771 2 804.377754 1606.74096 67559.93 0.29526 0.0002375 -0.18984 -0.0001527 0.10542 8.4799E-05 804.377113168565 809.38233532313 65.116 0.4402 65.116 64.922 65.362 0 92 35 4 0 0 0 0.00012053 2 38306 77.062 70.822 1 1.2942 1.278 0 12754000 5585700 7168300 41013 39 15445 15863 64372;64373 64372 YVENPSQVLNCER 13 0 1 Unmodified _YVENPSQVLNCER_ 0 0 0 B4DLT2;A0A024R071;O75694;E9PF10;B3KMK3 B4DLT2 B4DLT2 NUP155 Nuclear pore complex protein Nup155 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 804.3779 2 804.377754 1606.74096 71451.09 0.52138 0.00041938 0.0014173 1.1401E-06 0.52279 0.00042052 804.878621651529 809.382435260758 76.225 0.298 76.225 76.037 76.335 0 61 20 4 0 0 0 0.032449 2 40685 33.057 33.057 1 1.0907 0.947 0 2196900 998810 1198100 41014 39 15445 15863 64374;64375 64374 YVFTDISYSIPHR 13 0 1 Unmodified _YVFTDISYSIPHR_ 0 0 0 H7C5L9;G5E9W7;G5E9V5;P82650;Q8NBL6;H7C5F2;H7C5H3;A8K9Y7 H7C5L9 H7C5L9 MRPS22 28S ribosomal protein S22, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 536.6076 3 533.271824 1596.79364 92958.65 0.85355 0.00045517 -0.12829 -6.8412E-05 0.72526 0.00038676 533.272280680377 536.607785146119 92.964 0.4388 92.964 92.754 93.192 7.6294E-06 83 37 4 0 0 0 0.010745 1 56258 24.72 24.72 1 1.1431 1.1825 0 10314000 3716300 6598200 41015 1277 15446 15864 64376 64376 YVFTDISYSIPHR 13 0 1 Unmodified _YVFTDISYSIPHR_ 0 0 0 H7C5L9;G5E9W7;G5E9V5;P82650;Q8NBL6;H7C5F2;H7C5H3;A8K9Y7 H7C5L9 H7C5L9 MRPS22 28S ribosomal protein S22, mitochondrial ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 536.6084 3 533.271824 1596.79364 NaN NaN NaN -0.15837 -8.4454E-05 NaN NaN NaN NaN 91.885 0.40016 91.885 91.752 92.153 0 0 0 0 0.021082 1 56942 37.613 31.408 1 NaN NaN 0 8381400 0 8381400 41016 1277 15446 15864 64377 64377 YVHADAPTNK 10 1 0 Unmodified _YVHADAPTNK_ 0 0 0 Q58EY4;Q92922;Q05CR1;Q05BW5;F8WE13 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 558.2768 2 558.277638 1114.54072 80179.64 0.63691 0.00035557 -0.17126 -9.5612E-05 0.46565 0.00025996 558.277247569718 562.284682568688 16.047 0.33134 16.047 15.912 16.244 0 64 18 5 0 0 0 0.00085026 2 3521 80.219 67.863 1 0.72973 0.73511 0 7185300 4147300 3037900 41017 1798 15447 15865 64378;64379 64379 YVHLFPK 7 1 0 Unmodified _YVHLFPK_ 0 0 0 O75643;A4FU77 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 452.2577 2 452.257988 902.501424 84501.02 0.046332 2.0954E-05 1.2086 0.00054658 1.2549 0.00056754 452.258157597089 456.265692719687 47.103 0.54969 47.103 46.79 47.34 0 165 45 6 0 0 0 0.019831 1 26076 94.669 94.669 1 1.1883 1.3391 0 60141000 29723000 30418000 41018 1411 15448 15866 64380 64380 YVIYIER 7 0 1 Unmodified _YVIYIER_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 478.2661 2 478.26601 954.517468 87473.38 -0.25211 -0.00012058 0.2807 0.00013425 0.028581 1.367E-05 478.266067902914 483.270199613615 69.775 1.6631 69.775 69.329 70.992 0 641 142 9 0 0 0 0.026805 1 40444 84.244 64.397 1 0.80684 0.95714 0 660430000 363240000 297190000 41019 1629;1214 15449 15867 64381 64381 YVIYIER 7 0 1 Unmodified _YVIYIER_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 478.2658 2 478.26601 954.517468 87235.41 0.1918 9.1729E-05 0.028429 1.3597E-05 0.22022 0.00010533 478.266016360423 483.270021945575 68.539 1.1462 68.539 68.03 69.177 0 522 94 9 0 0 0 0.026805 1 40550 84.244 64.397 1 0.78589 0.92106 0 733940000 424380000 309560000 41020 1629;1214 15449 15867 64382 64382 YVIYIER 7 0 1 Unmodified _YVIYIER_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 483.27 2 478.26601 954.517468 87565.25 0.09084 4.3446E-05 -0.00748 -3.5774E-06 0.08336 3.9868E-05 478.265972399068 483.26999817109 79.787 2.2917 79.787 78.934 81.226 0 573 148 10 0 0 0 0.051136 2 42876 54.549 43.181 1 0.56042 0.48311 0 69551000 45731000 23821000 41021 1629;1214 15449 15867 64383;64384 64384 YVIYIER 7 0 1 Unmodified _YVIYIER_ 0 0 0 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;J3KS10;E5RIT6;Q9UNX3 Q6IBH6;E5RIT6 Q6IBH6 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 478.2662 2 478.26601 954.517468 87105.12 0.19768 9.4545E-05 -0.18515 -8.8549E-05 0.012538 5.9965E-06 478.26585964497 483.269916167543 79.913 1.7337 79.913 79.445 81.179 0 577 113 10 0 0 0 0.045193 2 42102 60.788 49.419 1 0.56736 0.49509 0 64781000 41178000 23604000 41022 1629;1214 15449 15867 64385;64386 64385 YVLINWVGEDVPDAR 15 0 1 Unmodified _YVLINWVGEDVPDAR_ 0 0 0 Q16643;D6R9W4;D6RFI1;D6RCR4 Q16643 Q16643 DBN1 Drebrin MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 878.9539 2 873.446494 1744.87843 65499.66 0.53624 0.00046838 -0.13991 -0.0001222 0.39634 0.00034618 873.946791501102 878.450471650224 115.25 0.44197 115.25 115.03 115.47 0 90 28 5 0 0 0 0.00022114 1 73240 65.5 59.655 1 0.79353 0.78993 0 8148900 3498300 4650600 41023 1773 15450 15868 64387 64387 YVLINWVGEDVPDAR 15 0 1 Unmodified _YVLINWVGEDVPDAR_ 0 0 0 Q16643;D6R9W4;D6RFI1;D6RCR4 Q16643 Q16643 DBN1 Drebrin MULTI-SECPEP 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 873.4457 2 873.446494 1744.87843 64715.42 0.53861 0.00047044 0.017082 1.4921E-05 0.55569 0.00048537 873.946733404645 878.450873926504 114.71 0.32716 114.71 114.53 114.86 0 60 19 5 0 0 0 1.192E-07 1 74749 97.214 97.214 1 1.0774 1.0855 0 10654000 5743100 4911400 41024 1773 15450 15868 64388 64388 YVLLNPK 7 1 0 Unmodified _YVLLNPK_ 0 0 0 A0A024R8V6;Q9P275;A0A075B784;E9PEW0;Q9H9C5;K7ELR5;Q8IXW9;K7EQS0;K7EPT1;K7ERC1;K7ELT3 A0A024R8V6 A0A024R8V6 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 427.7648 2 423.757821 845.501089 97069.58 0.21737 9.2112E-05 -1.0402 -0.00044081 -0.82286 -0.00034869 423.757379512002 427.764364263092 56.386 0.65649 56.386 56.102 56.758 -3.8147E-06 161 58 4 0 0 0 0.026837 1 31711 80.377 43.79 1 1.2075 1.2296 0 14172000 5705900 8466000 41025 260 15451 15869 64389 64389 YVLVAGITPTPLGEGK 16 1 0 Unmodified _YVLVAGITPTPLGEGK_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 811.9665 2 807.958706 1613.90286 69960.1 1.1296 0.00091264 0.097912 7.9109E-05 1.2275 0.00099174 807.959653990416 811.965920115577 108.39 0.43075 108.39 108.22 108.65 0 95 32 5 0 0 0 0.00015324 1 67658 85.845 85.845 1 1.8428 1.9099 0 14773000 4874700 9897900 41026 418 15452 15870 64390 64390 YVLVAGITPTPLGEGK 16 1 0 Unmodified _YVLVAGITPTPLGEGK_ 0 0 0 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 A0A087WVM4 A0A087WVM4 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 811.966 2 807.958706 1613.90286 69970.55 0.78329 0.00063287 0.11695 9.449E-05 0.90024 0.00072736 808.460533988317 811.965808526447 107.86 0.39528 107.86 107.61 108 0 104 28 5 0 0 0 0.00010548 2 68847 99.215 99.215 1 1.8878 1.947 0 11518000 4345400 7172800 41027 418 15452 15870 64391;64392 64391 YVMGNNPADLLAVDSR 16 0 1 Oxidation (M) _YVM(ox)GNNPADLLAVDSR_ YVM(1)GNNPADLLAVDSR YVM(64.65)GNNPADLLAVDSR 0 1 0 Q02413 Q02413 Q02413 DSG1 Desmoglein-1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 875.9297 2 875.925068 1749.83558 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.155 1 92.155 91.655 92.655 0 0 0 0 0.00042176 1 55842 64.65 55.462 1 41028 1678 15453 15871 64393 64393 1480 YVMTTTTLER 10 0 1 Oxidation (M) _YVM(ox)TTTTLER_ YVM(1)TTTTLER YVM(71.69)TTTTLER 0 1 0 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 620.8098 2 615.805371 1229.59619 NaN NaN NaN 0.60279 0.0003712 NaN NaN NaN NaN 36.681 0.1281 36.681 36.592 36.72 3.8147E-06 0 0 0 0.0014585 1 18560 71.692 58.655 1 NaN NaN 0 2493900 0 2493900 41029 1445 15454 15872 64394 64394 1152 YVMTTTTLER 10 0 1 Oxidation (M) _YVM(ox)TTTTLER_ YVM(1)TTTTLER YVM(82.75)TTTTLER 0 1 0 Q53XC0;P05198;H0YJS4;G3V4T5 Q53XC0 Q53XC0 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 620.8126 2 615.805371 1229.59619 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.609 1 35.609 35.109 36.109 -3.8147E-06 0 0 0 3.2061E-05 1 18169 82.749 60.009 1 41030 1445 15454 15872 64395 64395 1152 YVNLEEADNQTLDSYR 16 0 1 Unmodified _YVNLEEADNQTLDSYR_ 0 0 0 P33981 P33981 P33981 TTK Dual specificity protein kinase TTK MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 970.4491 2 965.444876 1928.8752 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.335 1 80.335 79.835 80.835 0 0 0 0 0.00066179 1 47758 75.479 67.568 1 41031 1539 15455 15873 64396 64396 YVNLEEADNQTLDSYR 16 0 1 Unmodified _YVNLEEADNQTLDSYR_ 0 0 0 P33981 P33981 P33981 TTK Dual specificity protein kinase TTK MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 970.4498 2 965.444876 1928.8752 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.517 1 79.517 79.017 80.017 7.6294E-06 0 0 0 0.00087604 1 48322 72.496 58.338 1 41032 1539 15455 15873 64397 64397 YVPGSSGSSNTLPTADPFTGAGR 23 0 1 Unmodified _YVPGSSGSSNTLPTADPFTGAGR_ 0 0 0 Q9Y263;E5RIM3;H0YBW4 Q9Y263 Q9Y263 PLAA Phospholipase A-2-activating protein ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1125.5411 2 1120.03492 2238.05529 NaN NaN NaN -1.2259 -0.0013731 NaN NaN NaN NaN 90.62 0.14742 90.62 90.507 90.655 0 0 0 0 0.0099465 1 56048 30.961 25.682 1 NaN NaN 0 4033200 0 4033200 41033 2123 15456 15874 64398 64398 YVQELAAVR 9 0 1 Unmodified _YVQELAAVR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 529.7971 2 524.792924 1047.57129 NaN NaN NaN -0.20422 -0.00010717 NaN NaN NaN NaN 60.62 0.76029 60.62 60.4 61.161 0 0 0 0 0.0034102 1 30985 78.516 55.776 1 NaN NaN 0 4582100 0 4582100 41034 186;1747 15457 15875 64399 64399 YVQELAAVR 9 0 1 Unmodified _YVQELAAVR_ 0 0 0 A0A024R5M9;A0A087WY61;Q59HB8;A0A024R5G4;Q7Z757;Q96HN5;H0YFY6;K4DIE0;Q4LE64;Q14980 A0A024R5M9;Q4LE64 Q4LE64 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 524.7928 2 524.792924 1047.57129 85604.38 0.25776 0.00013527 -0.11908 -6.2493E-05 0.13867 7.2775E-05 524.792945559546 529.796797235492 61.044 1.1253 61.044 60.777 61.903 -3.8147E-06 271 95 6 0 0 0 0.019235 2 30560 51.346 41.758 1 1.7121 1.4211 0 5816700 2443400 3373300 41035 186;1747 15457 15875 64400;64401 64401 YVSINSTLESCELR 14 0 1 Unmodified _YVSINSTLESCELR_ 0 0 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 840.9094 2 835.906344 1669.79814 NaN NaN NaN -1.5148 -0.0012663 NaN NaN NaN NaN 83.983 0.040756 83.983 83.957 83.997 0 0 0 0 0.02114 1 51529 44.543 28.405 1 NaN NaN 0 1807400 0 1807400 41036 1833 15458 15876 64402 64402 YVSQYYPK 8 1 0 Unmodified _YVSQYYPK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 528.2679 2 524.260925 1046.5073 82950.77 0.47156 0.00024722 -0.067426 -3.5349E-05 0.40413 0.00021187 524.260931645196 528.267826313608 37.655 0.99989 37.655 37.293 38.293 -3.8147E-06 487 84 9 0 0 0 0.038748 1 19120 47.849 43.863 1 0.80931 0.9263 0 187620000 108160000 79453000 41037 1817 15459 15877 64403 64403 YVSQYYPK 8 1 0 Unmodified _YVSQYYPK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 524.2621 2 524.260925 1046.5073 83779.68 0.56411 0.00029574 0.070639 3.7034E-05 0.63475 0.00033277 524.261056878744 528.267882434619 36.607 0.94929 36.607 36.401 37.35 0 350 74 8 0 0 0 0.0022675 2 18842 101.33 87.748 1 0.75846 0.88832 0 311460000 165990000 145470000 41038 1817 15459 15877 64404;64405 64404 YVSQYYPK 8 1 0 Unmodified _YVSQYYPK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 524.2616 2 524.260925 1046.5073 82158.59 0.25814 0.00013533 -0.39885 -0.0002091 -0.14071 -7.3768E-05 524.260872713214 528.267721561112 43.274 1.5084 43.274 42.966 44.475 0 613 99 13 0 0 0 0.04634 1 20262 45.081 35.494 1 0.95406 0.80947 0 60593000 30985000 29608000 41039 1817 15459 15877 64406 64406 YVSQYYPK 8 1 0 Unmodified _YVSQYYPK_ 0 0 0 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 528.2682 2 524.260925 1046.5073 82644.18 0.19001 9.9613E-05 -0.086793 -4.5502E-05 0.10321 5.4111E-05 524.260997730512 528.267835234985 43.438 1.373 43.438 43.072 44.445 0 449 86 10 0 0 0 0.055747 2 19816 41.652 37.906 1 0.95483 0.80118 0 48270000 23686000 24584000 41040 1817 15459 15877 64407;64408 64408 YVTAFNGELEDYMSDR 16 0 1 Oxidation (M) _YVTAFNGELEDYM(ox)SDR_ YVTAFNGELEDYM(1)SDR YVTAFNGELEDYM(49.45)SDR 0 1 0 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;B2RCY5 F5H8D7 F5H8D7 XRCC1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 968.4236 2 963.41473 1924.81491 62553.25 0.43558 0.00041965 2.0093 0.0019358 2.4449 0.0023554 963.414702071072 969.425729856421 86.325 0.33695 86.325 86.14 86.476 0 88 25 6 0 0 0 0.00021533 1 51945 49.448 46.108 1 1.3047 1.3671 0 12440000 5474100 6965900 41041 58 15460 15878 64409 64409 29 YVTAFNGELEDYMSDR 16 0 1 Oxidation (M) _YVTAFNGELEDYM(ox)SDR_ YVTAFNGELEDYM(1)SDR YVTAFNGELEDYM(42.84)SDR 0 1 0 F5H8D7;A0A024R0S8;Q59HH7;B4DTD3;B2RCY5 F5H8D7 F5H8D7 XRCC1 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 963.4131 2 963.41473 1924.81491 NaN NaN NaN -0.43112 -0.00041534 NaN NaN NaN NaN 85.608 0.3375 85.608 85.42 85.757 0 0 0 0 0.0045814 1 52618 42.843 37.564 1 NaN NaN 0 6474300 6474300 0 41042 58 15460 15878 64410 64410 29 YVTDIQPSEQNESNINK 17 1 0 Unmodified _YVTDIQPSEQNESNINK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 994.4815 2 989.971258 1977.92796 62439.01 0.21063 0.00020852 0.58733 0.00058144 0.79796 0.00078995 990.473637332681 993.9786569527 50.797 0.44379 50.797 50.604 51.048 3.8147E-06 160 39 6 0 0 0 3.3407E-18 2 28029 133.05 127.95 1 0.88226 0.86429 0 21728000 10562000 11166000 41043 1795 15461 15879 64411;64412 64412 YVTDIQPSEQNESNINK 17 1 0 Unmodified _YVTDIQPSEQNESNINK_ 0 0 0 Q562F6;B7Z7S9 Q562F6 Q562F6 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 990.4736 2 989.971258 1977.92796 62276.8 0.52785 0.00052256 0.42863 0.00042433 0.95648 0.00094689 990.473505050216 994.480046407384 49.664 0.42487 49.664 49.438 49.863 -3.8147E-06 144 33 6 0 0 0 4.7691E-13 4 27997 122.34 113.39 1 1.0469 1.1245 0 21457000 9992200 11464000 41044 1795 15461 15879 64413;64414;64415;64416 64415 YVVVTGITPTPLGEGK 16 1 0 Unmodified _YVVVTGITPTPLGEGK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 815.9575 2 815.956163 1629.89777 66904.43 0.52726 0.00043022 0.58343 0.00047605 1.1107 0.00090627 815.956264757922 819.963939051976 99.361 0.66502 99.361 99.055 99.72 0 232 54 6 0 0 0 0.00015434 2 60805 70.089 70.089 1 1.676 1.652 0 19499000 8512500 10986000 41045 196 15462 15880 64417;64418 64418 YVVVTGITPTPLGEGK 16 1 0 Unmodified _YVVVTGITPTPLGEGK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 819.9659 2 815.956163 1629.89777 67283.68 0.96101 0.00078414 1.1634 0.0009493 2.1244 0.0017334 816.458664875034 819.964423520451 98.633 0.68997 98.633 98.342 99.032 -7.6294E-06 236 57 6 0 0 0 1.2655E-06 2 61589 96.103 96.103 1 1.8757 1.9924 0 23380000 8053800 15327000 41046 196 15462 15880 64419;64420 64419 YVVVTGITPTPLGEGK 16 1 0 Unmodified _YVVVTGITPTPLGEGK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 820.4656 2 815.956163 1629.89777 68519.3 0.94949 0.00077475 0.64028 0.00052244 1.5898 0.0012972 815.956661979655 820.465465563946 111.89 0.34088 111.89 111.72 112.06 -7.6294E-06 89 22 6 0 0 0 0.00015349 2 64918 75.045 75.045 1 1.0961 0.86476 0 5428000 2470200 2957800 41047 196 15462 15880 64421;64422 64422 YVVVTGITPTPLGEGK 16 1 0 Unmodified _YVVVTGITPTPLGEGK_ 0 0 0 A0A024R652;P11586;F5H2F4;B7Z809 A0A024R652 A0A024R652 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 819.9637 2 815.956163 1629.89777 68497.75 0.70247 0.00057319 0.16534 0.00013491 0.86781 0.00070809 815.956121128942 820.464987226957 111.69 0.3988 111.69 111.55 111.94 0 89 24 7 0 0 0 0.018805 1 63914 29.303 29.303 1 1.1902 0.97157 0 4695400 2492900 2202500 41048 196 15462 15880 64423 64423 YVYNYEAESSSGVPGTADSR 20 0 1 Unmodified _YVYNYEAESSSGVPGTADSR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1076.9784 2 1076.4769 2150.93926 NaN NaN NaN -0.38692 -0.00041651 NaN NaN NaN NaN 65.086 0.12563 65.086 64.989 65.115 0 0 0 0 0.00059251 1 37424 50.843 45.459 1 NaN NaN 0 2751300 2751300 0 + 41049 1146 15463 15881 64424 64424 YVYNYEAESSSGVPGTADSR 20 0 1 Unmodified _YVYNYEAESSSGVPGTADSR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1076.9785 2 1076.4769 2150.93926 NaN NaN NaN -0.90226 -0.00097126 NaN NaN NaN NaN 65.156 0.19477 65.156 65.039 65.234 -7.6294E-06 0 0 0 1.9251E-05 1 37487 65.219 59.94 1 NaN NaN 0 3598000 3598000 0 + 41050 1146 15463 15881 64425 64425 YVYSVLDDVIPEEILGK 17 1 0 Unmodified _YVYSVLDDVIPEEILGK_ 0 0 0 B4DH44;P45985;B7ZA62;B7Z9Y5 B4DH44 B4DH44 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 981.0242 2 976.516782 1951.01901 NaN NaN NaN 0.94694 0.0009247 NaN NaN NaN NaN 132.93 0.30077 132.93 132.75 133.05 0 0 0 0 0.010016 2 89114 43.084 29.178 1 NaN NaN 0 3211600 0 3211600 41051 973 15464 15882 64426;64427 64427 YWDLMNLSEK 10 1 0 Oxidation (M) _YWDLM(ox)NLSEK_ YWDLM(1)NLSEK YWDLM(41.72)NLSEK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 657.8059 2 657.805371 1313.59619 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.947 1 85.947 85.447 86.447 0 0 0 0 0.033728 1 51696 41.724 30.573 1 41052 1183 15465 15883 64428 64428 902 YWDLMNLSEK 10 1 0 Oxidation (M) _YWDLM(ox)NLSEK_ YWDLM(1)NLSEK YWDLM(62.82)NLSEK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 661.8122 2 657.805371 1313.59619 78134.94 1.0006 0.00065821 0.13504 8.8829E-05 1.1356 0.00074704 657.805898525305 661.812175086846 85.088 0.65385 85.088 84.751 85.405 0 164 56 5 0 0 0 0.0018461 2 52267 62.823 56.902 1 1.499 1.5693 0 10534000 3893000 6640900 41053 1183 15465 15883 64429;64430 64429 902 YWDLMNLSEK 10 1 0 Oxidation (M) _YWDLM(ox)NLSEK_ YWDLM(1)NLSEK YWDLM(56.43)NLSEK 0 1 0 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 Q8N4P8 GTPBP4 Nucleolar GTP-binding protein 1 MSMS 1 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 661.8126 2 657.805371 1313.59619 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.952 1 98.952 98.452 99.452 0 0 0 0 0.0058685 1 55871 56.432 41.281 1 41054 1183 15465 15883 64431 64431 902 YWEEETVPTTAGASPGPPR 19 0 1 Unmodified _YWEEETVPTTAGASPGPPR_ 0 0 0 B0UZZ8;O15213;A8K9A1;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 1023.4876 2 1022.98417 2043.95378 59921.4 0.19466 0.00019913 0.17539 0.00017942 0.37005 0.00037855 1022.98415765408 1028.49008693434 77.108 0.54853 77.108 76.854 77.402 0 226 48 7 0 0 0 7.2516E-06 2 45677 77.185 74.476 1 1.0058 1.0192 0 18060000 9983000 8077000 41055 809 15466 15884 64432;64433 64433 YWEEETVPTTAGASPGPPR 19 0 1 Unmodified _YWEEETVPTTAGASPGPPR_ 0 0 0 B0UZZ8;O15213;A8K9A1;A8K806 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 1023.4838 2 1022.98417 2043.95378 60131.5 0.066521 6.805E-05 0.28836 0.00029499 0.35488 0.00036304 1022.98460486062 1028.49015625527 76.194 0.46488 76.194 75.988 76.452 0 190 41 6 0 0 0 6.1262E-08 2 45875 88.021 85.594 1 1.0048 1.063 0 23630000 12541000 11089000 41056 809 15466 15884 64434;64435 64435 YWIDIQLR 8 0 1 Unmodified _YWIDIQLR_ 0 0 0 Q6P2Q9;B4DK16;Q6JH02;Q6JH03 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 558.8079 2 553.803291 1105.59203 90088.51 0.80076 0.00044346 0.1041 5.7649E-05 0.90486 0.00050111 553.803410165683 558.807503293132 108.99 0.31596 108.99 108.9 109.21 7.6294E-06 59 23 4 0 0 0 0.026448 1 69950 54.549 49.815 1 1.0573 1.0731 0 5392300 2282900 3109400 41057 1854 15467 15885 64436 64436 YWLCAATGPSIK 12 1 0 Unmodified _YWLCAATGPSIK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;H0YAM7;D6REE5;H0Y8R5;D6RF23;H0Y9P0 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 687.8524 2 683.84483 1365.67511 NaN NaN NaN -0.2052 -0.00014033 NaN NaN NaN NaN 87.108 0.90538 87.108 86.63 87.535 0 0 0 0 0.00046331 1 52507 88.681 73.53 1 NaN NaN 0 13932000 0 13932000 41058 1227 15468 15886 64437 64437 YWLCAATGPSIK 12 1 0 Unmodified _YWLCAATGPSIK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;H0YAM7;D6REE5;H0Y8R5;D6RF23;H0Y9P0 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 687.8527 2 683.84483 1365.67511 73232.61 0.56758 0.00038814 0.20396 0.00013948 0.77155 0.00052762 683.84483581545 687.852245221831 99.645 0.52157 99.645 99.379 99.9 -7.6294E-06 110 32 6 0 0 0 0.0017153 2 56303 60.434 60.434 1 1.7439 1.3824 0 4728800 1835100 2893700 41059 1227 15468 15886 64438;64439 64438 YWLCAATGPSIK 12 1 0 Unmodified _YWLCAATGPSIK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;H0YAM7;D6REE5;H0Y8R5;D6RF23;H0Y9P0 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 683.8455 2 683.84483 1365.67511 NaN NaN NaN 0.082724 5.657E-05 NaN NaN NaN NaN 99.424 0.42606 99.424 99.238 99.664 -7.6294E-06 0 0 0 0.025253 1 55351 49.3 44.688 1 NaN NaN 0 1804300 1804300 0 41060 1227 15468 15886 64440 64440 YWLCAATGPSIK 12 1 0 Unmodified _YWLCAATGPSIK_ 0 0 0 E9KL35;P63244;J3KPE3;D6RAC2;H0Y8W2;H0YAF8;H0YAM7;D6REE5;H0Y8R5;D6RF23;H0Y9P0 E9KL35 E9KL35 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MSMS 1 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 687.8518 2 683.84483 1365.67511 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.417 1 99.417 98.917 99.917 0 0 0 0 0.0029895 1 55381 67.334 58.801 1 41061 1227 15468 15886 64441 64441 YWLFSDEVPGLFIEK 15 1 0 Unmodified _YWLFSDEVPGLFIEK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 925.9774 2 921.969271 1841.92399 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.52 1 133.52 133.02 134.02 0 0 0 0 0.011921 1 89721 45.879 36.685 1 41062 2103 15469 15887 64442 64442 YWTLTATGGVQSTASSK 17 1 0 Unmodified _YWTLTATGGVQSTASSK_ 0 0 0 B3KTA3;Q16658;C9JPH9;C9JFC0;A0A0A0MSB2;B3KTM9 B3KTA3 B3KTA3 FSCN1 Fascin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 883.9481 2 879.438866 1756.86318 NaN NaN NaN -0.087628 -7.7063E-05 NaN NaN NaN NaN 79.225 0.39935 79.225 79.051 79.45 0 0 0 0 1.2932E-06 3 46892 81.494 64.058 1 NaN NaN 0 4744400 0 4744400 41063 942 15470 15888 64443;64444;64445 64444 YWTLTATGGVQSTASSK 17 1 0 Unmodified _YWTLTATGGVQSTASSK_ 0 0 0 B3KTA3;Q16658;C9JPH9;C9JFC0;A0A0A0MSB2;B3KTM9 B3KTA3 B3KTA3 FSCN1 Fascin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 879.439 2 879.438866 1756.86318 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.255 1 79.255 78.755 79.755 0 0 0 0 0.0066955 1 46985 48.568 26.54 1 41064 942 15470 15888 64446 64446 YWTLTATGGVQSTASSK 17 1 0 Unmodified _YWTLTATGGVQSTASSK_ 0 0 0 B3KTA3;Q16658;C9JPH9;C9JFC0;A0A0A0MSB2;B3KTM9 B3KTA3 B3KTA3 FSCN1 Fascin ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 883.9479 2 879.438866 1756.86318 NaN NaN NaN 0.065239 5.7374E-05 NaN NaN NaN NaN 78.119 0.40108 78.119 77.958 78.359 0 0 0 0 6.9018E-05 1 47250 72.496 54.184 1 NaN NaN 0 9070200 0 9070200 41065 942 15470 15888 64447 64447 YWTLTATGGVQSTASSK 17 1 0 Unmodified _YWTLTATGGVQSTASSK_ 0 0 0 B3KTA3;Q16658;C9JPH9;C9JFC0;A0A0A0MSB2;B3KTM9 B3KTA3 B3KTA3 FSCN1 Fascin MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 879.439 2 879.438866 1756.86318 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.097 1 78.097 77.597 78.597 0 0 0 0 0.00036443 1 47325 70.622 47.246 1 41066 942 15470 15888 64448 64448 YWTLTATGGVQSTASSK 17 1 0 Unmodified _YWTLTATGGVQSTASSK_ 0 0 0 B3KTA3;Q16658;C9JPH9;C9JFC0;A0A0A0MSB2;B3KTM9 B3KTA3 B3KTA3 FSCN1 Fascin MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 883.4467 2 879.438866 1756.86318 68507.78 0.66251 0.00058263 0.38674 0.00034011 1.0492 0.00092274 879.43860679442 883.446248579896 90.684 0.45286 90.684 90.476 90.929 0 87 25 6 0 0 0 0.01957 1 50268 38.769 38.769 1 1.6883 1.4149 0 1864800 785550 1079300 41067 942 15470 15888 64449 64449 YYAVNYPLR 9 0 1 Unmodified _YYAVNYPLR_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5TEE2 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 579.8005 2 579.800749 1157.58694 80742.62 0.46472 0.00026944 0.5863 0.00033994 1.051 0.00060938 579.800884180087 584.804713557629 73.041 0.88569 73.041 72.737 73.623 0 280 78 6 0 0 0 0.00023642 3 42748 105.2 105.2 1 0.74602 0.79744 0 44928000 24831000 20097000 41068 1715 15471 15889 64450;64451;64452 64452 YYAVNYPLR 9 0 1 Unmodified _YYAVNYPLR_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5TEE2 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 579.8004 2 579.800749 1157.58694 80763.55 0.59946 0.00034757 0.13364 7.7485E-05 0.7331 0.00042505 579.800730695003 584.804558389095 71.818 0.89141 71.818 71.464 72.356 0 241 76 4 0 0 0 0.00023642 3 42997 105.2 88.363 1 0.78287 0.85544 0 30277000 17123000 13153000 41069 1715 15471 15889 64453;64454;64455 64455 YYAVNYPLR 9 0 1 Unmodified _YYAVNYPLR_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5TEE2 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 584.8049 2 579.800749 1157.58694 82051.8 0.44494 0.00025798 0.45846 0.00026581 0.9034 0.00052379 579.80084044087 584.804969631419 83.584 0.72575 83.584 83.276 84.002 7.6294E-06 168 52 5 0 0 0 0.0087997 2 45472 60.76 57.188 1 1.7331 1.4738 0 5336100 2122900 3213200 41070 1715 15471 15889 64456;64457 64456 YYAVNYPLR 9 0 1 Unmodified _YYAVNYPLR_ 0 0 0 Q6IT96;Q13547;B5BU61;B4DRG0;Q5TEE2 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 584.8054 2 579.800749 1157.58694 81103.35 0.62011 0.00035954 0.24492 0.00014201 0.86504 0.00050155 579.80069440558 584.804974550495 83.692 0.60027 83.692 83.416 84.017 0 148 41 5 0 0 0 0.0054551 3 44727 66.682 63.11 1 1.378 1.1433 0 5462900 1863400 3599400 41071 1715 15471 15889 64458;64459;64460 64459 YYEAADTVTQFDNVR 15 0 1 Unmodified _YYEAADTVTQFDNVR_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;Q658P9;F8VZW6 Q59G16 Q59G16 SMARCC2;DKFZp313D0632 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 901.4171 2 896.412848 1790.81114 64337.72 0.79698 0.00071443 0.28323 0.00025389 1.0802 0.00096832 896.412640446336 901.416860505943 82.642 0.53687 82.642 82.398 82.935 0 210 43 8 0 0 0 1.6387E-05 2 49335 88.187 88.187 1 0.72481 0.73651 0 18335000 10956000 7378700 41072 321 15472 15890 64461;64462 64462 YYEAADTVTQFDNVR 15 0 1 Unmodified _YYEAADTVTQFDNVR_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;Q658P9;F8VZW6 Q59G16 Q59G16 SMARCC2;DKFZp313D0632 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 896.415 2 896.412848 1790.81114 64410.72 0.83641 0.00074976 -0.14662 -0.00013143 0.68979 0.00061833 896.412694867657 901.416543981892 81.757 0.59497 81.757 81.449 82.044 0 193 50 6 0 0 0 2.8243E-15 2 49905 131.37 131.37 1 0.78353 0.81981 0 22653000 9434900 13219000 41073 321 15472 15890 64463;64464 64464 YYEAADTVTQFDNVR 15 0 1 Unmodified _YYEAADTVTQFDNVR_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;Q658P9;F8VZW6 Q59G16 Q59G16 SMARCC2;DKFZp313D0632 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 901.9198 2 896.412848 1790.81114 63105.58 0.53063 0.00047567 -0.78374 -0.00070256 -0.25311 -0.00022689 896.412191188858 901.415832525397 94.765 0.54432 94.765 94.47 95.014 0 115 36 5 0 0 0 0.00022552 2 53055 72.29 66.797 1 1.5851 1.3322 0 4363500 1766100 2597400 41074 321 15472 15890 64465;64466 64466 YYEAADTVTQFDNVR 15 0 1 Unmodified _YYEAADTVTQFDNVR_ 0 0 0 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2;Q658P9;F8VZW6 Q59G16 Q59G16 SMARCC2;DKFZp313D0632 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 901.4168 2 896.412848 1790.81114 64077.69 0.26866 0.00024083 -0.33421 -0.00029959 -0.06555 -5.8759E-05 896.41313640087 901.416716832299 94.761 0.47678 94.761 94.485 94.962 7.6294E-06 111 28 6 0 0 0 0.0002241 3 52168 70.089 70.089 1 1.5794 1.396 0 3766600 1440600 2326000 41075 321 15472 15890 64467;64468;64469 64468 YYGLQILENVIK 12 1 0 Unmodified _YYGLQILENVIK_ 0 0 0 O14980;H7BZC5;C9IZS4;C9JQ02;C9JV99;C9J673;C9JKM9 O14980 O14980 XPO1 Exportin-1 ISO-MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 730.917 2 726.908485 1451.80242 NaN NaN NaN 0.21879 0.00015904 NaN NaN NaN NaN 126.83 0.50699 126.83 126.58 127.09 7.6294E-06 0 0 0 0.00065451 1 82499 86.624 75.46 1 NaN NaN 0 5033600 0 5033600 41076 1371 15473 15891 64470 64470 YYGLQILENVIK 12 1 0 Unmodified _YYGLQILENVIK_ 0 0 0 O14980;H7BZC5;C9IZS4;C9JQ02;C9JV99;C9J673;C9JKM9 O14980 O14980 XPO1 Exportin-1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 730.9169 2 726.908485 1451.80242 73718.38 0.94456 0.00068661 0.39269 0.00028545 1.3372 0.00097205 726.908838142012 730.915891978626 126.35 0.54296 126.35 126.06 126.6 -7.6294E-06 155 33 7 0 0 0 0.00014575 2 84217 93.111 85.73 1 2.3783 2.4054 0 8895500 2800900 6094600 41077 1371 15473 15891 64471;64472 64472 YYGQNGQQILSASQDGTLQSFSTVHEK 27 1 0 Unmodified _YYGQNGQQILSASQDGTLQSFSTVHEK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 996.4799 3 996.144091 2985.41044 62101.52 0.095393 9.5025E-05 0.2538 0.00025282 0.3492 0.00034785 996.478357015293 999.149833318122 89.598 0.58131 89.598 89.347 89.928 0 257 50 9 0 0 0 6.0463E-16 2 54226 66.886 66.886 1 0.85879 0.9086 0 31182000 14420000 16762000 41078 486 15474 15892 64473;64474 64474 YYGQNGQQILSASQDGTLQSFSTVHEK 27 1 0 Unmodified _YYGQNGQQILSASQDGTLQSFSTVHEK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 996.1428 3 996.144091 2985.41044 61378.28 0.48668 0.0004848 0.16632 0.00016568 0.653 0.00065048 996.478275073001 999.149574432966 88.629 0.54126 88.629 88.428 88.969 0 265 46 9 0 0 0 3.1267E-07 2 54569 47.331 47.331 1 0.96966 1.0766 0 49260000 25953000 23307000 41079 486 15474 15892 64475;64476 64475 YYGQNGQQILSASQDGTLQSFSTVHEK 27 1 0 Unmodified _YYGQNGQQILSASQDGTLQSFSTVHEK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 996.4796 3 996.144091 2985.41044 60488.69 0.238 0.00023708 0.26227 0.00026126 0.50027 0.00049834 996.478660499666 999.149858102804 103.03 0.56858 103.03 102.8 103.37 0 306 36 11 0 0 0 0.02003 1 58437 18.356 18.356 1 1.2482 1.018 0 32417000 13277000 19140000 41080 486 15474 15892 64477 64477 YYGQNGQQILSASQDGTLQSFSTVHEK 27 1 0 Unmodified _YYGQNGQQILSASQDGTLQSFSTVHEK_ 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 999.1506 3 996.144091 2985.41044 60677.39 0.039263 3.9112E-05 0.36231 0.00036092 0.40158 0.00040003 996.478719618534 999.150110363816 102.84 0.57442 102.84 102.6 103.17 0 298 36 12 0 0 0 1.1202E-16 1 57574 73.341 73.341 1 1.2275 0.99932 0 25454000 11273000 14181000 41081 486 15474 15892 64478 64478 YYLIQLLEDDAQR 13 0 1 Unmodified _YYLIQLLEDDAQR_ 0 0 0 G3V167;A8K214;Q9UGN5;B4DV82 G3V167 G3V167 PARP2 Poly [ADP-ribose] polymerase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 820.4236 2 820.419945 1638.82534 69299.06 0.75367 0.00061832 1.0837 0.0008891 1.8374 0.0015074 820.421444719536 825.424136171688 122.51 0.4556 122.51 122.28 122.73 -7.6294E-06 148 33 6 0 0 0 6.7586E-09 2 79315 118.4 114.87 1 0.75129 0.75871 0 7733700 4327700 3406000 41082 706 15475 15893 64479;64480 64480 YYLIQLLEDDAQR 13 0 1 Unmodified _YYLIQLLEDDAQR_ 0 0 0 G3V167;A8K214;Q9UGN5;B4DV82 G3V167 G3V167 PARP2 Poly [ADP-ribose] polymerase 2 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 820.9223 2 820.419945 1638.82534 68217.6 0.98462 0.0008078 0.6515 0.0005345 1.6361 0.0013423 820.420931054758 825.423680884332 121.92 0.67797 121.92 121.59 122.26 7.6294E-06 172 48 6 0 0 0 6.0232E-09 2 80840 130.94 119.16 1 0.68151 0.67251 0 12872000 7681900 5189800 41083 706 15475 15893 64481;64482 64482 YYNDYGDIIK 10 1 0 Unmodified _YYNDYGDIIK_ 0 0 0 B2R8Y6;Q6MZM4;Q6MZM3;Q6MZP3;Q8N3U4;Q6AI02;B4DQ46;Q4LE48;Q8WVM7;B4E2Q7 B2R8Y6 B2R8Y6 DKFZp686P16143;DKFZp686C21148;DKFZp686I05169;STAG2;DKFZp686P168;STAG1 variant protein;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 636.3067 2 632.298236 1262.58192 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.605 1 72.605 72.105 73.105 0 0 0 0 0.0097241 1 43572 57.859 49.933 1 41084 863 15476 15894 64483 64483 YYPTEDVPR 9 0 1 Unmodified _YYPTEDVPR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 575.2764 2 570.272021 1138.52949 80836.11 0.65204 0.00037184 0.28421 0.00016208 0.93625 0.00053392 570.272329452425 575.276144596526 47.597 1.0945 47.597 47.271 48.366 0 411 95 8 0 0 0 0.0036023 2 25888 71.379 67.633 1 0.82833 0.98159 0 490840000 267690000 223150000 41085 342 15477 15895 64484;64485 64485 YYPTEDVPR 9 0 1 Unmodified _YYPTEDVPR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 575.2764 2 570.272021 1138.52949 80060.69 0.74726 0.00042614 0.27521 0.00015694 1.0225 0.00058309 570.272315313066 575.276127299039 46.476 1.0723 46.476 46.134 47.206 0 415 88 10 0 0 0 0.00079176 2 25591 94.302 88.993 1 0.87353 1.0213 0 603370000 331720000 271650000 41086 342 15477 15895 64486;64487 64486 YYPTEDVPR 9 0 1 Unmodified _YYPTEDVPR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 570.2726 2 570.272021 1138.52949 82471.17 0.53027 0.0003024 -0.001307 -7.4537E-07 0.52897 0.00030165 570.272068336452 575.276150815766 55.314 1.5278 55.314 54.934 56.462 -3.8147E-06 401 98 9 0 0 0 0.0095109 1 27674 60.118 53.888 1 0.86214 0.73649 0 38371000 19933000 18438000 41087 342 15477 15895 64488 64488 YYPTEDVPR 9 0 1 Unmodified _YYPTEDVPR_ 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 570.2726 2 570.272021 1138.52949 80035.52 0.42875 0.00024451 0.081479 4.6465E-05 0.51023 0.00029097 570.272106995471 575.276213492877 55.798 1.4311 55.798 55.458 56.889 3.8147E-06 434 95 10 0 0 0 0.03016 2 27351 45.972 43.762 1 0.80894 0.7056 0 39648000 21325000 18323000 41088 342 15477 15895 64489;64490 64490 YYPTEDVPRK 10 1 1 Unmodified _YYPTEDVPRK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 634.3195 2 634.319502 1266.62445 74812.55 0.6178 0.00039188 0.29007 0.000184 0.90787 0.00057588 634.319859652118 643.330810649217 28.988 0.8778 28.988 28.684 29.562 0 245 56 8 0 0 0 0.0006642 4 13795 87.639 82.699 1 0.96688 1.1666 0 140080000 72845000 67232000 41089 342 15478 15896 64491;64492;64493;64494 64492 YYPTEDVPRK 10 1 1 Unmodified _YYPTEDVPRK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 423.2162 3 423.215427 1266.62445 91818.67 0.11144 4.7162E-05 0.16276 6.8882E-05 0.27419 0.00011604 423.215389283935 429.222937836785 28.924 0.97961 28.924 28.684 29.664 0 317 64 9 0 0 0 0.0012118 2 13826 52.79 51.092 1 0.90669 1.0955 0 172240000 88341000 83899000 41090 342 15478 15896 64495;64496 64496 YYPTEDVPRK 10 1 1 Unmodified _YYPTEDVPRK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.2158 3 423.215427 1266.62445 92142.67 -0.095851 -4.0566E-05 0.32357 0.00013694 0.22772 9.6374E-05 423.215443516743 429.223020695803 28.053 1.1419 28.053 27.907 29.049 -1.9073E-06 270 88 7 0 0 0 0.0005926 2 13229 59.426 59.426 1 0.98829 1.166 0 119570000 57554000 62021000 41091 342 15478 15896 64497;64498 64497 YYPTEDVPRK 10 1 1 Unmodified _YYPTEDVPRK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 643.3314 2 634.319502 1266.62445 75316.03 0.45479 0.00028848 0.90173 0.00057198 1.3565 0.00086046 634.320286128073 643.331019371972 28.759 0.56304 28.759 28.374 28.937 1.9073E-06 245 54 6 0 0 0 0.0037657 2 13738 69.954 69.954 1 0.79938 0.93068 0 42275000 24467000 17808000 41092 342 15478 15896 64499;64500 64499 YYPTEDVPRK 10 1 1 Unmodified _YYPTEDVPRK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 423.2151 3 423.215427 1266.62445 NaN NaN NaN 0.50504 0.00021374 NaN NaN NaN NaN 28.606 0.59576 28.606 28.387 28.982 0 0 0 0 0.022653 1 13776 33.088 26.115 1 NaN NaN 0 23005000 23005000 0 41093 342 15478 15896 64501 64501 YYPTEDVPRK 10 1 1 Unmodified _YYPTEDVPRK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 634.3206 2 634.319502 1266.62445 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.986 1 28.986 28.486 29.486 0 0 0 0 0.024198 1 13891 60.91 49.55 1 41094 342 15478 15896 64502 64502 YYPTEDVPRK 10 1 1 Unmodified _YYPTEDVPRK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-SECPEP 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 643.2981 2 634.319502 1266.62445 77695.67 0.67491 0.00042811 -0.099267 -6.2967E-05 0.57564 0.00036514 634.319399969845 643.330571751579 33.946 0.82955 33.946 33.382 34.211 3.8147E-06 332 73 6 0 0 0 0.037246 1 14818 46.158 27.055 1 0.79231 0.68472 0 14056000 8281900 5774600 41095 342 15478 15896 64503 64503 YYPTEDVPRK 10 1 1 Unmodified _YYPTEDVPRK_ 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 429.2229 3 423.215427 1266.62445 92613.95 -0.40037 -0.00016944 0.54782 0.00023184 0.14745 6.2402E-05 423.215577142456 429.223087170793 33.989 1.0596 33.989 33.547 34.606 0 358 85 7 0 0 0 0.011014 1 14448 31.185 21.181 1 0.71738 0.60857 0 19531000 12153000 7377400 41096 342 15478 15896 64504 64504 YYSIASSSK 9 1 0 Unmodified _YYSIASSSK_ 0 0 0 B2R6E5;A8K3B4;Q59ED7;H0Y4R2;P16435;Q63HL4;B4DJI8;E7EMD0;B4DDH3;B4DKM8;B4E305 B2R6E5 B2R6E5 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 507.2556 2 503.248015 1004.48148 91221.16 0.60277 0.00030334 1.0993 0.00055322 1.7021 0.00085656 503.248714104253 507.255163449658 29.417 0.268 29.417 29.262 29.53 -1.9073E-06 68 21 4 0 0 0 0.0011742 2 14205 88.948 88.948 1 0.7592 0.7752 0 13175000 5550500 7624900 41097 719 15479 15897 64505;64506 64505 YYSLWIPEQAR 11 0 1 Unmodified _YYSLWIPEQAR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 713.3624 2 713.361702 1424.70885 76122.95 1.1479 0.00081887 -0.28518 -0.00020343 0.86273 0.00061544 713.361422045812 718.36548119083 102.02 0.64432 102.02 101.72 102.37 0 123 51 4 0 0 0 0.0046747 1 62755 57.59 57.59 1 0.8661 0.89612 0 6028100 3196400 2831700 41098 1392 15480 15898 64507 64507 YYSLWIPEQAR 11 0 1 Unmodified _YYSLWIPEQAR_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 718.3644 2 713.361702 1424.70885 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.01 1 101.01 100.51 101.51 0 0 0 0 0.031577 1 63543 48.283 36.057 1 41099 1392 15480 15898 64508 64508 YYTGVVNNNEMVALQR 16 0 1 Oxidation (M) _YYTGVVNNNEM(ox)VALQR_ YYTGVVNNNEM(1)VALQR YYTGVVNNNEM(45.65)VALQR 0 1 0 Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527;Q05DQ5;Q05DF7;Q05BZ6 Q59GQ7 Q59GQ7 HLTF Helicase-like transcription factor ISO-MSMS 0 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 943.9556 2 943.9569 1885.89925 NaN NaN NaN -0.41683 -0.00039347 NaN NaN NaN NaN 69.618 0.25906 69.618 69.452 69.711 -7.6294E-06 0 0 0 0.003805 1 40467 45.653 36.464 1 NaN NaN 0 4229000 4229000 0 41100 512 15481 15899 64509 64509 361 YYTLFGR 7 0 1 Unmodified _YYTLFGR_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 465.2414 2 460.237253 918.459953 91795.44 0.12918 5.9452E-05 0.39662 0.00018254 0.5258 0.00024199 460.237403788013 465.241469036963 77.889 0.88544 77.889 77.522 78.407 0 190 70 4 0 0 0 0.034211 1 45895 62.714 51.898 1 2.6776 2.8086 0 11042000 2875200 8167000 41101 1454 15482 15900 64510 64510 YYTLFGR 7 0 1 Unmodified _YYTLFGR_ 0 0 0 P07814;B4DP50 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 460.2374 2 460.237253 918.459953 91424.34 -0.11442 -5.2662E-05 0.43655 0.00020091 0.32212 0.00014825 460.237503314428 465.241454729585 76.53 0.69854 76.53 76.232 76.93 0 165 53 5 0 0 0 0.031504 1 46142 67.035 49.268 1 2.5057 2.4805 0 15456000 3726100 11730000 41102 1454 15482 15900 64511 64511 YYTSASGDEMVSLK 14 1 0 Oxidation (M) _YYTSASGDEM(ox)VSLK_ YYTSASGDEM(1)VSLK YYTSASGDEM(122.7)VSLK 0 1 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 787.861 2 783.853246 1565.69194 68363.41 0.76644 0.00060077 0.20608 0.00016153 0.97251 0.00076231 783.854154579459 787.860244926043 51.631 0.66702 51.631 51.269 51.936 -3.8147E-06 221 59 6 0 0 0 3.4755E-10 2 28516 122.7 115.57 1 2.4951 2.6901 0 37612000 9349400 28263000 41103 1348 15483 15901 64512;64513 64512 1010 YYTSASGDEMVSLK 14 1 0 Oxidation (M) _YYTSASGDEM(ox)VSLK_ YYTSASGDEM(1)VSLK YYTSASGDEM(127.87)VSLK 0 1 0 K9JA46;P07900;Q2VPJ6;Q8TBA7;Q86U12;O75322;Q96HX7 K9JA46 K9JA46 EL52;HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 787.8604 2 783.853246 1565.69194 69299.4 0.68411 0.00053624 0.1585 0.00012424 0.84261 0.00066048 783.853776686539 787.860223348752 50.281 0.68276 50.281 49.951 50.634 0 165 61 4 0 0 0 1.5163E-14 2 28417 127.87 114.78 1 2.755 2.9904 0 22266000 6407100 15859000 41104 1348 15483 15901 64514;64515 64515 1010 YYVLNALK 8 1 0 Unmodified _YYVLNALK_ 0 0 0 Q6P2Q9;I3L0J9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 492.2814 2 492.28166 982.548768 88764.59 0.77023 0.00037917 -0.19684 -9.6903E-05 0.57338 0.00028227 492.281357836417 496.288687799207 80.776 0.57281 80.776 80.529 81.102 0 210 49 6 0 0 0 0.027969 1 48002 53.554 45.214 1 0.69573 0.68232 0 22661000 12522000 10139000 41105 1854 15484 15902 64516 64516 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;B4DV42;A0A087WVQ9;B4DNE0;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;A6PW80;Q5JR01 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 472.2501 3 468.91386 1403.71975 87603.18 0.41634 0.00019523 0.00903 4.2343E-06 0.42537 0.00019946 468.914055383893 472.250038270094 71.842 1.5724 71.842 71.252 72.825 0 877 126 11 0 0 0 0.00025197 2 41717 54.7 51.013 1 2.1774 2.5863 0 937930000 301230000 636710000 41106 1658 15485 15903 64517;64518 64518 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;B4DV42;A0A087WVQ9;B4DNE0;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;A6PW80;Q5JR01 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.8724 2 702.867151 1403.71975 72367.42 0.79757 0.00056058 0.34514 0.00024259 1.1427 0.00080317 702.867418759839 707.871608629664 71.84 1.3844 71.84 71.252 72.637 0 881 113 12 0 0 0 0.00011876 3 41703 107.15 107.15 1 2.2082 2.6181 0 564840000 185530000 379310000 41107 1658 15485 15903 64519;64520;64521 64520 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;B4DV42;A0A087WVQ9;B4DNE0;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;A6PW80;Q5JR01 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 707.8699 2 702.867151 1403.71975 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.73 1 73.73 73.23 74.23 0 0 0 0 0.0074145 1 43249 60.518 39.055 1 41108 1658 15485 15903 64522 64522 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;B4DV42;A0A087WVQ9;B4DNE0;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;A6PW80;Q5JR01 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 707.8715 2 702.867151 1403.71975 72555.48 0.62563 0.00043974 0.061967 4.3555E-05 0.6876 0.00048329 702.867223559159 707.871343192508 69.943 1.4964 69.943 69.606 71.102 0 785 121 10 0 0 0 4.0306E-08 3 41866 116.3 115.71 1 2.1203 2.4924 0 934430000 290990000 643450000 41109 1658 15485 15903 64523;64524;64525 64524 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;B4DV42;A0A087WVQ9;B4DNE0;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;A6PW80;Q5JR01 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 468.9137 3 468.91386 1403.71975 87136.41 0.20886 9.7937E-05 -0.17757 -8.3265E-05 0.031289 1.4672E-05 468.914043295426 472.249946365896 69.943 1.8037 69.943 69.522 71.325 0 870 144 10 0 0 0 0.001309 4 42201 53.967 53.967 1 2.1247 2.5088 0 1339700000 394610000 945130000 41110 1658 15485 15903 64526;64527;64528;64529 64529 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;B4DV42;A0A087WVQ9;B4DNE0;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;A6PW80;Q5JR01 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 468.9136 3 468.91386 1403.71975 87238.88 0.19468 9.1286E-05 -0.22511 -0.00010556 -0.030433 -1.427E-05 468.913926771912 472.249838854155 81.089 1.6197 81.089 80.696 82.316 0 655 98 10 0 0 0 0.04927 1 43758 20.463 20.463 1 1.3798 1.1928 0 109270000 45647000 63626000 41111 1658 15485 15903 64530 64530 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;B4DV42;A0A087WVQ9;B4DNE0;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;A6PW80;Q5JR01 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 707.8716 2 702.867151 1403.71975 72291.21 0.59992 0.00042166 -0.066411 -4.6678E-05 0.5335 0.00037498 702.867271176879 707.871189948184 81.087 1.9429 81.087 80.636 82.579 0 673 116 11 0 0 0 0.00095797 3 44230 64.297 64.297 1 1.4366 1.2425 0 118470000 47267000 71205000 41112 1658 15485 15903 64531;64532;64533 64532 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;B4DV42;A0A087WVQ9;B4DNE0;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;A6PW80;Q5JR01 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 702.8686 2 702.867151 1403.71975 71777.63 0.6521 0.00045834 -0.20703 -0.00014551 0.44508 0.00031283 702.867195645896 707.871068794483 81.153 2.0007 81.153 80.757 82.757 0 595 118 10 0 0 0 0.00082999 4 42950 80.688 80.688 1 1.4971 1.3068 0 97093000 38074000 59019000 41113 1658 15485 15903 64534;64535;64536;64537 64535 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q5VTE0;P68104;A8K9C4;Q53GE9;Q53G85;Q96RE1;Q53GA1;B4DV42;A0A087WVQ9;B4DNE0;Q9NZS6;A0A087WV01;Q9H2I7;Q16577;A9X7H1;A6PW80;Q5JR01 Q6IPT9 Q6IPT9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 472.2499 3 468.91386 1403.71975 87695.71 0.3892 0.0001825 -0.4278 -0.0002006 -0.0386 -1.81E-05 468.91381008983 472.249683011431 81.178 1.668 81.178 80.771 82.439 0 649 99 11 0 0 0 0.0048159 2 42982 35.204 35.204 1 1.431 1.249 0 86579000 36021000 50558000 41114 1658 15485 15903 64538;64539 64539 YYYAVVDCDSPETASK 16 1 0 Unmodified _YYYAVVDCDSPETASK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No01 BAZ1AB_exp1 938.4142 2 934.406374 1866.7982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.275 1 68.275 67.775 68.775 0 0 0 0 0.00034991 1 39555 79.82 66.158 1 41115 2033 15486 15904 64540 64540 YYYAVVDCDSPETASK 16 1 0 Unmodified _YYYAVVDCDSPETASK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MSMS 1 20170518_BAZ1AB_KO_whole_ms2Orbi_2ug_No02 BAZ1AB_exp1 938.4136 2 934.406374 1866.7982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.214 1 67.214 66.714 67.714 0 0 0 0 0.00071341 1 39791 74.76 61.097 1 41116 2033 15486 15904 64541 64541 YYYAVVDCDSPETASK 16 1 0 Unmodified _YYYAVVDCDSPETASK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_BAZ1AB_KO_whole_1st BAZ1AB_exp2 934.4064 2 934.406374 1866.7982 62004.16 0.54533 0.00050956 -0.27808 -0.00025984 0.26725 0.00024972 934.40557537756 938.41353116428 78.397 0.58196 78.397 78.096 78.678 0 171 38 6 0 0 0 0.00015141 2 42081 63.473 63.473 1 1.2874 1.0064 0 3827900 1467400 2360500 41117 2033 15486 15904 64542;64543 64543 YYYAVVDCDSPETASK 16 1 0 Unmodified _YYYAVVDCDSPETASK_ 0 0 0 Q9H501;A0JLU5;Q05C10;A0A087WX71 Q9H501 Q9H501 ESF1 ESF1 homolog ISO-MSMS 0 20171017_BAZ1AB_KO_whole_2nd BAZ1AB_exp2 934.4077 2 934.406374 1866.7982 NaN NaN NaN -1.7265 -0.0016132 NaN NaN NaN NaN 78.741 0.8067 78.741 78.298 79.105 0 0 0 0 0.0013048 1 41453 64.121 58.276 1 NaN NaN 0 1686500 1686500 0 41118 2033 15486 15904 64544 64544